TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.330048 %AT, 2968376 nt, 21486 terms. Intergenic: 0.379848 %AT, H2T: 497858 nt, 3887 terms; T2T: 114457 nt, 1696 terms; H2H: 215956 nt, 2739 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|83814055|ref|NC_007677.1| Salinibacter ruber DSM 13855, complete genome (length 3551823) TERM 1 242 - 208 - g 70 -10.7 -3.53012 | gap 2, opp_overlap 208 226 CTCTCTGCTCCGAAA GACGGTCACGCGGGTGC TCG GCCCCCACG-G-CCGTC TGGTCTACGACGTGG TERM 2 1112 - 1132 + G 72 -8.3 -4.15044 | overlap 1085 GACGACGGGATCGAC CTCGACGAT GAC GTTGTCGAG TTTATTGCCCAGAGC TERM 3 1361 - 1344 - g 72 -4.8 -4.46212 | overlap 1354 1356 TCTCGCAGGAGAAAA TGCGGA GCAAGA CCCGCA AGCGAGACGTCACCC dnaA 2 - 1576 + | chromosomal replication initiator protein DnaA dnaN 1709 - 2842 + | DNA polymerase III, beta subunit TERM 4 2879 - 2918 + T 79 -13.6 -3.53012 | gap 1, overlap 2881 2883 ATCGCGATCCGTGTC TAG-ACTGGGGGCCGGCGT GTT GCACCGGTCCCCAGTGCTG TTTGGGAAGGGGAGG TERM 5 2881 - 2916 + T 77 -14 -3.34398 | gap 1, overlap 2879 2883 CGCGATCCGTGTCTA G-ACTGGGGGCCGGCGT GTT GCACCGGTCCCCAGTGC TGTTTGGGAAGGGGA TERM 6 2883 - 2913 + T 83 -16.8 -2.84325 | overlap 2881 2879 CGATCCGTGTCTAGA CTGGGGGCCGGCGT GTT GCACCGGTCCCCAG TGCTGTTTGGGAAGG SRU_0003 3931 - 2936 - | TPR repeat-containing protein TERM 7 3059 - 3072 + g 70 -2.3 -4.58395 | overlap 3060 GGCGTCAACGTTTTC CTGCG CAAG CGCAA TTTTTCCGAGATAGA TERM 8 3514 - 3480 - G 80 -14.2 -3.75738 | opp_overlap 3485 CACCAGGAGGAAGAA GCAGCCGATGAGGATC CCG GCTCCGCACCGGCCGC GTCGGGGGCCTGCAC SRU_0004 4809 - 4174 - | RNA polymerase sigma-70 factor, putative TERM 9 5147 - 5166 + G 79 -10.6 -3.9392 | opp_overlap 5134, overlap 5148 CACGTCCTGCGAAGG CGGGCGGG CAGC CCCGCCCC TTCTTTCGGCTCGGA TERM 10 5148 - 5165 + G 72 -14.1 -2.96031 | opp_overlap 5134, overlap 5147 ACGTCCTGCGAAGGC GGGCGGG CAGC CCCGCCC CTTCTTTCGGCTCGG SRU_0005 5074 - 6048 + | SCO1/SenC family protein SRU_0006 7009 - 6116 - | retinol dehydrogenase 11 rpe 7893 - 7159 - | ribulose-phosphate 3-epimerase SRU_0008 8062 - 8403 + | hypothetical protein SRU_0009 8568 - 9080 + | hypothetical protein SRU_0010 10181 - 9129 - | hypothetical protein TERM 11 9266 - 9252 - G 74 -7.8 -4.20367 | overlap 9257 CGTGGCAACAAAGAA GAGCAG TCG CCGCTC GGCGTCAGTGCCCAC TERM 12 9857 - 9877 + g 77 -16.1 -2.76696 | overlap 9864 ACGAGGCGGGGGAGG GCCCCGTCG CCC CGGCGGGGC GTTCTTCGGGAACCG TERM 13 9864 - 9878 + g 74 -12.8 -3.61398 | overlap 9857 GGGGGAGGGCCCCGT CGCCCC GGC GGGGCG TTCTTCGGGAACCGG TERM 14 10546 - 10585 + H 100 -5.6 -5.56263 | gap 1, overlap 10547 10548 GCCGGAAGGCAGCAG CGGTAGGAGG-TCGCAGCG GCG CGCTGCGGGTCGCTTGCCC TTTTTCTTTTGTCGT TERM 15 10547 - 10584 + H 74 -9.1 -3.91317 | gap 1, overlap 10546 10548 CCGGAAGGCAGCAGC GGTAGGAGG-TCGCAGCG GCG CGCTGCGGGTCGCTTGCC CTTTTTCTTTTGTCG TERM 16 10967 - 10938 - g 75 -7.1 -4.39828 | gap 1, overlap 10940 AACAGGGCGACAAAA TCGTGACCGTGGGC GGT GTCCACGG-CACCA TTCAGAAAATCGACG yajC 10739 - 11074 + | preprotein translocase, YajC subunit ribBA 11129 - 12376 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II TERM 17 12510 - 12554 + G 87 -17.2 -3.39327 | gap 2 GTGATTCGTCTGCAG GCCGGCGACT--GGCTGGCCGC ACT GTGGCCGGCCCTAATCGCCGGC TTCTGCGTCTACCGC SRU_0013 12429 - 12593 + | hypothetical protein SRU_0014 15703 - 13259 - | DNA internalization-related competence protein ComEC/Rec2 TERM 18 15045 - 15023 - G 73 -14.2 -3.14132 | GTGCGCCCGCAGGAA GACGAGTGCA TTC TGCACCCGTC CCCGCCGATCCCCAA nusB 15916 - 16398 + | transcription antitermination factor NusB TERM 19 16609 - 16633 + G 72 -4.9 -4.56597 | overlap 16611 CGACCGGCTTTTGGA CCTGCGCGAGA GCA TCTCCTGCACG TTTTTGCGGGGCAAC SRU_0016 16451 - 17113 + | serine/threonine protein phosphatase ychF 17091 - 18293 + | translation-associated GTPase TERM 20 19177 - 19135 - g 70 -13.3 -3.02043 | opp_overlap 19143 19174, overlap 19123 19122 AACCGCCCGCGAAGA GGCCTACGGCCGGTTCGTG AACGA CACGTACTGGCTGTTGGCC CCCCTGAAGGCCTTC TERM 21 19507 - 19521 + G 81 -12.8 -3.85698 | GGCGCTGCCCGAATC GCCCCC GGA GGGGGC TTTCTCGAACCCCGA SRU_0018 18623 - 19558 + | hypothetical protein TERM 22 19574 - 19598 + F 100 -18.6 -3.56273 | TCCTGCGTCTTCCGA CGGGCCCTGG CGTGC CCAGGGCCCG TTCTGTGCTGATCGA SRU_0019 19634 - 20893 + | hypothetical protein TERM 23 20971 - 20981 + F 78 -4.6 -4.76312 | opp_overlap 20949, overlap 20947 20966 TACGGCCGTTCGACC GGGC GTC GTCC TTTTTCCGTCTTGTG SRU_0020 21007 - 21828 + | phosphosulfolactate synthase rpmB 22022 - 22258 + | ribosomal protein L28 rpmG 22333 - 22497 + | ribosomal protein L33 TERM 24 22584 - 22564 - g 74 -2.5 -4.72272 | overlap 22569 GTTGCCGAGGAAAAA GAAGACG GCAACTA CGGCTTC CGTGAAAAGATCGTC SRU_0023 22501 - 22650 + | hypothetical protein TERM 25 23237 - 23264 + T 100 -17 -4.3534 | gap 1 CGTCACCTCCTGCAG GCGCCC-CTGGGC TCG GCCCGGCGGGCGC TTTTCGTCGTTCACG SRU_0026 25964 - 23412 - | putative replicative DNA helicase, intein-containing SRU_0027 27014 - 26151 - | uracil-DNA glycosylase coaBC 28280 - 27039 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase SRU_0029 28828 - 28463 - | hypothetical protein SRU_0030 29456 - 28890 - | guanylate kinase SRU_0031 30430 - 29546 - | hypothetical protein TERM 26 30510 - 30485 - R 73 -11.1 -3.55444 | overlap 30486 GGCCCATTTTCGAAA TCCCGCCTTCC GGGC GGAAGACGGGG ACTGGGCGTGCGGGA TERM 27 30509 - 30486 - R 75 -14.6 -2.73124 | overlap 30485 GCCCATTTTCGAAAT CCCGCCTTCC GGGC GGAAGACGGG GACTGGGCGTGCGGG frr 31274 - 30705 - | ribosome recycling factor pyrH 32102 - 31323 - | uridylate kinase tsf 33117 - 32287 - | translation elongation factor Ts rpsB 34279 - 33185 - | ribosomal protein S2 rpsI 34818 - 34420 - | ribosomal protein S9 rplM 35343 - 34873 - | 50S ribosomal protein L13 SRU_0039 35672 - 36193 + | hypothetical protein TERM 28 36450 - 36428 - g 77 -14.2 -3.4252 | CTCGACCTATTACAA TGAGCTGGAG CCC CCCCAGCTCA TGGAGTGCAATAACT rpmF 36363 - 36560 + | ribosomal protein L32 plsX 36837 - 37853 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 37897 - 38901 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 29 38906 - 38938 + G 72 -14.8 -2.74012 | opp_overlap 38911 CCTACGGCTGACGAT GGAAAGGCGACCGG GGGCG CCGGTCGCCCGTCC TCATTGCGATCCTGA TERM 30 38933 - 38911 - g 88 -16.3 -3.68351 | opp_overlap 38906 GGCTGACGATGGAAA GGCGACCGG GGGCG CCGGTCGCC CGTCCTCATTGCGAT fabD 38904 - 39926 + | malonyl CoA-acyl carrier protein transacylase TERM 31 40813 - 40791 - g 70 -4.1 -4.56597 | gap 1, opp_overlap 40797 40798, overlap 40792 CCGGGGCCTGAAAAA GGGCGTTCGT GACG ACGA-CGCCG GGCGCTCCTCCCGGC SRU_0044 39988 - 40833 + | hypothetical protein TERM 32 41065 - 41121 + G 77 -11.3 -3.76125 | GTCACCGGCGGCACG CGCGGCATCGGCCGTGCCCTCGTCGAG GCC TTCGCCGAGGCCGGGGCCCACGTGGCG TTTACGTTCCGCTCG TERM 33 41678 - 41689 + G 81 -3.6 -4.99043 | overlap 41661 CCACGACCGAAGAAA TCGC CGAG GCGG TTTTGTTTCTGGCGG fabG 41017 - 41766 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 34 41783 - 41793 + F 72 -2.4 -4.75776 | CACGACCCCGCCGCC GCCG TCC CCGC TTTTTGCATTCCGTT TERM 35 42565 - 42528 - g 70 -11.3 -3.6216 | gap 1, opp_overlap 42558, overlap 42519 42522 CATCAAGAAGGACAA CTTCGA-CGCCAGCACCC TCC GGATGCTGGTGCTCGACG AGGCCGACGAGATGC SRU_0046 41983 - 43419 + | ATP-dependent RNA helicase TERM 36 43973 - 43984 + T 72 -2.2 -4.81212 | gap 1, overlap 43973 CTAAAATTAAGCGTT CC-CC GGG GGTGG TTTTGTTATACTACG TERM 37 44036 - 44020 - T 72 -2.1 -4.79223 | opp_overlap 44022, overlap 44021 44022 TCACAGTAGTAAAAA GTGCGCC CTC GCCGCAA GGGTGCTTTTCCTAT TERM 38 44022 - 44042 + T 86 -8.9 -4.56729 | opp_overlap 44021 44020 44022 ACAGTAGTAAAAAGT GCGCCCTCG CCG CAAGGGTGC TTTTCCTATTTTGGT TERM 39 44270 - 44286 + T 83 -6.5 -4.88736 | opp_overlap 44259 GAGATCGCTCTGAGC GGGGC CGAGTGC GCCCC TTTTTCTGCATGCTG SRU_0047 45588 - 44458 - | DoxX subfamily protein SRU_0048 45942 - 45691 - | hypothetical protein TERM 40 45970 - 45951 - H 100 -10.6 -5.7946 | opp_overlap 45951 45948 CCCGCAATAAAAAAA GCCCGCCC TGCG GGGCTGGC TCACTTTTCCTATTA TERM 41 46021 - 46033 + H 81 -7.7 -4.50058 | opp_overlap 46013 GCAAAATCGACCCCC GGGTT GTC AACCC TTTTCGTTGTGGATC TERM 42 46107 - 46082 - g 81 -7.5 -4.67982 | gap 1, overlap 46086 TGCGAGTGAATAAAA CGGACGACCGCG CGG CGGGGCC-TCCG AAACCCGGGCGAAAC SRU_0049 46066 - 47298 + | aminopeptidase SRU_0050 47601 - 49058 + | PKD domain-containing protein rpmH 49558 - 49782 + | hypothetical protein SRU_0054 49795 - 50235 + | hypothetical protein TERM 43 50451 - 50507 + G 82 -15.4 -3.3771 | opp_overlap 50452 50455, overlap 50451 50452 50463 ACCCCGAGCCGGAAG ACCAGCGC-AACGTGATCATCGCGACCA TCC TGGTCGCCGTGATCATGTTCGC-CTGGA TCTTCTGGTTTAGCC TERM 44 50452 - 50506 + G 87 -18.9 -2.62144 | opp_overlap 50452 50455, overlap 50451 50451 50463 CCCCGAGCCGGAAGA CCAGCGC-AACGTGATCATCGCGACCA TCC TGGTCGCCGTGATCATGTTCGC-CTGG ATCTTCTGGTTTAGC TERM 45 50506 - 50452 - g 74 -14.5 -3.04144 | opp_overlap 50452 50451 50451 50463, overlap 50455 CCCCGAGCCGGAAGA CCA-GCGCAACGTGATCATCGCGACCA TCC TGGTCGCCGTGATCATGTT-CGCCTGG ATCTTCTGGTTTAGC TERM 46 50502 - 50455 - g 72 -15 -2.74523 | gap 1, opp_overlap 50452 50451 50451 50463, overlap 50452 CGAGCCGGAAGACCA GCGCAACGTGATCATCGCGACCA TCC TGGTCGCCGTGATCATGTT-CGC CTGGATCTTCTGGTT TERM 47 50463 - 50495 + G 77 -15.7 -3.06671 | opp_overlap 50455 50452, overlap 50452 50451 50451 AAGACCAGCGCAACG TGATCATCGCGACCA TCC TGGTCGCCGTGATCA TGTTCGCCTGGATCT SRU_0055 50381 - 52378 + | inner membrane protein oxaA trmE 52573 - 53958 + | tRNA modification GTPase TrmE TERM 48 54471 - 54481 + G 72 -6.8 -4.19624 | TTCTTGCGGGCGGGA CCAG TCG CTGG TTTGTATTCGACGTA SRU_0057 54149 - 54895 + | acyl-ACP thioesterase SRU_0058 55061 - 55792 + | hypothetical protein TERM 49 56795 - 56780 - g 72 -11.8 -3.61398 | GGGCGTCTCGAAGAA GGCGGC TTTC GCCGCC TCGCCGCCCGCCTCG SRU_0059 56738 - 57217 + | hypothetical protein TERM 50 58359 - 58371 + G 72 -4.7 -4.45945 | opp_overlap 58344 GCAGCCGGGCGATCC GGACG CGA CGGCC TTTTCCTTCCTGACT gidA 57685 - 59679 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA SRU_0061 59754 - 60401 + | glucose inhibited division protein B SRU_0062 60470 - 61330 + | hypothetical protein mfd 64994 - 61566 - | transcription-repair coupling factor TERM 51 65209 - 65178 - H 71 -9.4 -3.81137 | gap 1, overlap 65179 CCCCAAACACCGAAA GCCCGA-CGCCGC AACATCA GCGGCGGTCGGGG AGGGGGAGGCAGACC TERM 52 65208 - 65179 - H 70 -12.9 -2.882 | gap 1, overlap 65178 CCCAAACACCGAAAG CCCGA-CGCCGC AACATCA GCGGCGGTCGGG GAGGGGGAGGCAGAC TERM 53 65307 - 65261 - H 77 -12.5 -3.62597 | gap 2, opp_overlap 65278 TTCACTTCGGAAGAA TCAACGGCGCAAACGAGCGAGGA GGT TCCTCCGTCGT-TGCGC-GTTGA CGCAACGGGTGGCGA TERM 54 65435 - 65404 - H 73 -10.8 -3.60098 | gap 1, opp_overlap 65404 ACGTTTCACGTGAAA CGGGGTGGGCACGTC CAC GA-GTGCTCTCCCCG TTTGGTCTGTAATCG TERM 55 65404 - 65435 + H 83 -13 -3.89956 | gap 1, opp_overlap 65404 ACGTTTCACGTGAAA CGGGGTGGGCACGTC CAC GA-GTGCTCTCCCCG TTTGGTCTGTAATCG SRU_0064 65480 - 65836 + | biotin synthesis protein, putative murQ 67581 - 66646 - | N-acetylmuramic acid-6-phosphate etherase SRU_0066 70316 - 67641 - | TPR repeat-containing protein TERM 56 68128 - 68117 - G 81 -3.6 -4.99043 | CGTGGAGAAACAAAA GCCC GTCC GAGC TGGAGTCGGGGTGGA TERM 57 72338 - 72311 - g 73 -14.8 -2.93723 | overlap 72306 GGGGCAGGAACGAGA CCGCGGCACCAC CCTC GTGGGGCCGCAG CGGGACGAGCTCGTC recF 71532 - 72770 + | DNA replication and repair protein RecF TERM 58 74214 - 74238 + G 73 -14.3 -3.18264 | opp_overlap 74185 CGCGATCCAGGCGGC GGACCGGGAGG GGG CCTTTCGGTCC TTCGTCGATACGGAC SRU_0068 72880 - 74355 + | M48 family peptidase SRU_0069 74901 - 74455 - | putative phosphate acetyltransferase/enoyl-CoA hydratase fusion protein TERM 59 74956 - 74944 - H 83 -4.7 -5.093 | GGCAAAAGAAGAAAA GAGCG TTC CGCAC CCAAGGTAGAAAGAA TERM 60 75541 - 75571 + G 70 -2.5 -4.58395 | gap 2, overlap 75541 CGCGCTCTACTTTGC GTC--CGACCAGGAG CTG CGCCAGGTCGAAGAC TTTTTGGACGATCAG SRU_0070 75152 - 77701 + | hypothetical protein SRU_0071 79091 - 77736 - | integrase/recombinase TERM 61 77828 - 77847 + g 75 -13.6 -3.37796 | GCATGGTGGTGCGCA GCTGCTCG TGCG CGAGCAGC TTCTGGATGGTGCGC TERM 62 78662 - 78685 + g 85 -8 -4.7173 | opp_overlap 78656 GTGGAAGCAGGCGAA GCGTTCGGCC CAGC GGACGTACGC TTTTTCCGTGTGGTA SRU_0072 80198 - 80590 + | PilT protein, N-terminal, putative SRU_0073 82004 - 82249 + | hypothetical protein malP 84880 - 82754 - | maltodextrin phosphorylase TERM 63 83337 - 83372 + g 77 -14 -3.35679 | gap 1, opp_overlap 83327 83329 83360 GAGAAGAGGGCCCGG GCGCGCTCCCGATCC CGAAAGA GGAGCGGG-GCGCGC TTGTAGGTGGCGAAG TERM 64 85013 - 84995 - g 82 -5.9 -4.82901 | opp_overlap 85008 85009, overlap 84996 84999 GCTTCGGCACAAAAA GCCAGTC GCCCG GACGGGC GCCCCGATTGCTGTG SRU_0075 84966 - 87374 + | sensor histidine kinase SRU_0076 88247 - 87384 - | hypothetical protein TERM 65 87629 - 87594 - G 71 -3 -4.64766 | gap 1 CTGATAGTCGAAAAA CGTCTGGGGGAGGTCCG CGT CGGCCCCCACCTCG-CG CCCGTAGCTTACCGT TERM 66 87701 - 87720 + g 77 -10 -3.9122 | gap 1, opp_overlap 87692 AGAGGACGTACGTAT CGTCGGGCG AGT CGCCC-ACG TTCTTTCCAAACGTG SRU_0077 89799 - 88366 - | mercuric reductase zwf 91364 - 89850 - | glucose-6-phosphate 1-dehydrogenase gnd 92351 - 91440 - | 6-phosphogluconate dehydrogenase-like protein TERM 67 92055 - 92015 - G 86 -18.2 -3.07816 | opp_overlap 92015 CGTCGACGTAGTGAA GGCCATGCTCCTCCGCGC GCCCG GCGCGGCGGAGCGTGTCC TTGTAGTTCGAGTTG TERM 68 92015 - 92055 + g 100 -20.4 -3.52539 | opp_overlap 92015 CGTCGACGTAGTGAA GGCCATGCTCCTCCGCGC GCCCG GCGCGGCGGAGCGTGTCC TTGTAGTTCGAGTTG tal 95263 - 92501 - | bifunctional transaldolase/phosoglucose isomerase TERM 69 95429 - 95441 + H 74 -4.7 -4.54047 | CCTCGTGTCAATGCC CGGCC GAT GACCG TTTTGTCTGACATCG TERM 70 95797 - 95813 + H 89 -11.5 -4.38273 | ACGTCGCCGCCTTCG CGCCGGT GCT GCCGGCG TTTCTTCTCCTCTGT TERM 71 96302 - 96249 - H 100 -11.1 -5.3104 | TGAGCAAAAAGAAAA CACAGGCAGCGCTGCGACCGAC-GG CACCAC CCTATCCGCCGCAGCACC-CCTGTG TCACACGATCTACCG SRU_0081 96341 - 96973 + | hypothetical protein TERM 72 97016 - 97043 + F 100 -14.8 -5.45802 | opp_overlap 97016, overlap 97004 CGAGTGGACGCCAAA GGGCCGTCCCCT TCAT GGGGGGCGGTCC TTTTTGTTTTGGCGG SRU_0082 97174 - 97821 + | HTH-type transcriptional repressor Bm3R1, putative TERM 73 98205 - 98226 + GF 72 -13.7 -2.71924 | opp_overlap 98192, overlap 98204 AACTGCGATCGCTCA TGCGCCCGG AGCG CCGGGTGCA GTTTCCGGAGGCGTA SRU_0083 98069 - 100429 + | cation efflux system protein, putative TERM 74 100478 - 100489 + G 70 -2.2 -4.62313 | ACGGCACTCTCCATC GATG CCTA CGTC TTGTTTTTCGTTTTC TERM 75 100676 - 100707 + G 79 -10.8 -3.91084 | gap 1, overlap 100688 GGCCCGGGAGTACCC GGG-CACCGTCTCGG CGG CCGAGACGGCCACCC TTTCGTTCGAGCTCC SRU_0084 100404 - 101579 + | putative transport/efflux transmembrane protein TERM 76 102745 - 102757 + G 73 -9.1 -4.00782 | TGTGCTGGCGGTGAC CGTGC TCG GCACG TTTATCCTGATGTAC TERM 77 102991 - 103012 + G 73 -3.7 -4.64598 | gap 1, overlap 102973 CGCCGCCATCGGGAC CTCCTCCG ACAGCAG CGG-GGAG TTTTTGGGGTCGTTG TERM 78 104210 - 104222 + G 79 -4.8 -4.73613 | AATGCCTCGCTCTTC TCGG CGGTC CCGA TTTTCTTCGTGCTGA SRU_0085 101639 - 104689 + | AcrB/AcrD/AcrF family transporter SRU_0086 105156 - 107294 + | sensory box histidine kinase/response regulator ark 109308 - 107353 - | adaptive-response sensory-kinase TERM 79 109353 - 109331 - R 89 -11.2 -4.25104 | opp_overlap 109338, overlap 109346 CGGGCTGGAGCAAAA GGGGGACGTG AAG CACGCCTCCC GGCAGGCGGTCGGCG SRU_0088 112091 - 109551 - | pyridine nucleotide-disulphide oxidoreductase domain-containing protein TERM 80 109894 - 109875 - G 79 -4.2 -4.9792 | gap 1, overlap 109877 CAGGGGACAGAAAAA GCG-GCACC AGA AGCGCCCGC TGAGCCAGAAGTACA TERM 81 111338 - 111378 + g 72 -8.2 -4.04206 | gap 2 GGCCCTCGGGGGCCG GGTCGATCCGGTG-GGC-CG TCG CGTGCCGCACCGGAAGGTCC TTTGTCTGGGCCTCC SRU_0089 113872 - 112163 - | membrane bound his kinase A TERM 82 113303 - 113314 + g 70 -2.2 -4.64861 | gap 1, overlap 113303 ACGGTTCAGGAGTTT G-CGC TGG GCGGC TTTGTTTTGGGCGGC SRU_0090 115429 - 113972 - | hypothetical protein TERM 83 114982 - 114928 - G 87 -14.9 -3.83568 | gap 1 CGACATCGACAACAA GCCCTTCGCCTACCGGGGCCCCACGG ACGA CCGCCTGCCCCCGAT-GGCGAAGGTC GTGGCCGTCACCATC TERM 84 115057 - 115084 + g 70 -11.2 -3.53811 | opp_overlap 115043 115042 115059, overlap 115066 115070 GCGTGTCCTTCACGA CACGGTCGCCGG CCGG CCGCTGGCCGTG TTTCACGCCCCTGGC SRU_0091 115517 - 116584 + | hypothetical protein TERM 85 117218 - 117194 - g 72 -14.2 -3.02043 | AATGGGTGTTCAACA CGGCCGTGGG CGGGT CCCTCGGCCG CTTCGAGTGGAAGGT TERM 86 117415 - 117437 + G 74 -5.4 -4.57353 | overlap 117417 GACCGCCTCCCCGCA AGCCCGACGG TTA CCCTCGGGTA TTTTCTGTCGTGGGA TERM 87 117417 - 117435 + G 77 -10.2 -3.89814 | overlap 117415 CCGCCTCCCCGCAAG CCCGACGG TTA CCCTCGGG TATTTTCTGTCGTGG SRU_0092 116581 - 117471 + | hypothetical protein ppc 117625 - 120498 + | phosphoenolpyruvate carboxylase SRU_0094 120498 - 121160 + | hypothetical protein SRU_0095 124399 - 121196 - | utilizing regulatory protein tutC TERM 88 123729 - 123760 + g 70 -8.6 -3.98661 | gap 1 TACCGCACAAACTCG CCCTCGGCCGCCTGT TCG AC-GGCGGCCCGGAG TTTCTGCTGCGTCTC TERM 89 124758 - 124713 - H 89 -12.5 -4.13945 | gap 1, opp_overlap 124753 AGGGGCATTCGAAAA TCGGCCGGCCCGAACGA-GACG CCC CGTCGTCGTGCGGGTCGGGGGA GCGGCGGGTCGCTCC TERM 90 125018 - 125061 + H 74 -10.3 -3.69373 | opp_overlap 125036, overlap 125018 GCATATTCTTTCAGC GTG-GTGGGGAGGCGAACAGC GATG GCAGTTC-CCTCCCCGCGCCC TTCTTGGAATCTTTG TERM 91 126321 - 126336 + G 84 -9 -4.56775 | AGCGCGTCTTCTACC GAGACC AACG GGTCTC TTTTTCGAACCGCCT SRU_0096 125039 - 127927 + | TonB-dependent receptor domain-containing protein SRU_0097 127950 - 129395 + | hypothetical protein SRU_0098 129371 - 130924 + | hypothetical protein mauG 131485 - 132615 + | methylamine utilization protein TERM 92 132918 - 132905 - g 81 -3.8 -5.10163 | opp_overlap 132917 AATCGGAAAACAAAA CACG GCGTCT CGTG TCTGCCACACACAAT SRU_0100 132844 - 133863 + | hypothetical protein SRU_0101 134106 - 134714 + | hypothetical protein SRU_0102 134774 - 135604 + | hypothetical protein SRU_0103 135622 - 136074 + | TPR repeat-containing protein SRU_0104 136108 - 137163 + | LysM domain-containing protein TERM 93 137781 - 137795 + G 75 -4.9 -4.57569 | overlap 137770 137780 GGGTGCTGCTCGTGG GGGGG CTCTT CCTCC TTTTTCGGGCCCTGA SRU_0105 137252 - 138040 + | CAAX amino protease SRU_0106 138226 - 139056 + | putative peptidase SRU_0107 139238 - 139951 + | electron transport protein/SenC SRU_0108 140188 - 140466 + | ISSru3, transposase insA SRU_0109 140430 - 140906 + | ISSru3, transposase insB TERM 94 141440 - 141465 + G 72 -5.3 -4.36914 | TACGGGGAGTCCTAT CGACGTTACCG GCAG CGGTGTCCTCG TTTTCTCGGGGGAGC SRU_0110 140882 - 141514 + | hypothetical protein SRU_0111 141539 - 144013 + | cadmium efflux ATPase SRU_0112 144049 - 144495 + | transcriptional regulator, ArsR family protein SRU_0113 146162 - 144543 - | putative hydantoinase/oxoprolinase TERM 95 144846 - 144813 - G 81 -14.6 -3.53012 | gap 2 GTCGCCGCCCCGAAA CCGGCCCGCGCCGCCG CTGC CGG-GGCGCAG-CCGG TAGGCGACGATTCGA TERM 96 144937 - 144976 + g 83 -14.2 -3.78775 | TGCACCCCGCTGAGG CCGTCCCCGTCGGCATGG GCGC CCATGCCGCCGCCGATGG TTTCGTAGTAGGCAA TERM 97 145029 - 144993 - G 75 -11.4 -3.68351 | gap 1, opp_overlap 144993 144989 TTCGTAGTAGGCAAA GGGCGAC-CCGCCGGGC CGCA GCCCGGAGGCGACGTCC TCGGTTCGCTCAGGG TERM 98 147355 - 147373 + G 77 -13.1 -3.53012 | opp_overlap 147343 AGACCCCAATGCGAC CGCCGGG GTGGA CCCGGCG TTTGGAGAAGCCGAA SRU_0114 147041 - 149830 + | hypothetical protein SRU_0116 151047 - 151361 + | hypothetical protein gcdH 152778 - 151336 - | glutaryl-CoA dehydrogenase SRU_0117 153193 - 155694 + | putative outer membrane receptor for iron transport TERM 99 155700 - 155724 + F 80 -15 -3.14132 | CGGGTGGTAGACGCT CCGTCCCGTC CCATT GGCGGGACGG TTCGTCGCGGGAGCG TERM 100 156988 - 157000 + G 77 -5.5 -4.59773 | opp_overlap 156988, overlap 156986 CGTGTATAGCGACAA GGGAG ACC CTCTC TTTTTCCGCATCGAA SRU_0118 156848 - 157498 + | hypothetical protein TERM 101 157918 - 157932 + T 100 -10 -4.81814 | TGCTCCCTTTGTTGA TTCCCC CAG GGGGAA TTTTGTTATACTGGT TERM 102 158023 - 158070 + T 74 -9.2 -3.95073 | CAACCCAACAGGTTT TGGCCCGTCTCGGAGTTT CCTCCCCCGCCC ACACTCTGAGTCGGGCCA TTTCTGCGTCTCCGG SRU_0119 158869 - 158144 - | hypothetical protein TERM 103 158794 - 158780 - G 70 -11.4 -3.42699 | opp_overlap 158777 158776 ATCCACCGAGTAGAA GCGCTC GAC GAGCGC CCCGTTCGTCACTGT TERM 104 159127 - 159101 - H 70 -7.8 -4.10161 | opp_overlap 159121 GATGATCCGCGAAAA GGGGCCCGTTCA GAC TGGGCCGGCCCC AAGAGAGGCCATCTG SRU_0120 159451 - 160278 + | hypothetical protein SRU_0121 160450 - 160923 + | hypothetical protein SRU_0122 162162 - 162377 + | hypothetical protein TERM 105 162399 - 162384 - f 74 -10.4 -3.6806 | opp_overlap 162383 162383, overlap 162388 ACAGACTGAGGCAAA CGGACC GGCC GGTCCG GTTCGATCTACTGGG SRU_0123 162730 - 163479 + | hypothetical protein SRU_0124 163519 - 164286 + | hypothetical protein SRU_0125 164652 - 164512 - | hypothetical protein SRU_0126 166323 - 165130 - | hypothetical protein TERM 106 168048 - 168032 - g 72 -5.8 -4.32482 | gap 1, overlap 168025 168033 AGGCAGAAGGCAAAA CGCG-CC GCCC GGTCGCG ACGCTGGACGTGGAC SRU_0127 167269 - 168831 + | 15,15' beta carotene dioxygenase TERM 107 169584 - 169608 + G 72 -8.5 -4.05446 | overlap 169579 GGGCGCATTTCGGGA CCGTCCCGTTT CGG GAACGCGGCGG TTTGTGATTCCCGCC SRU_0128 168859 - 169710 + | hypothetical protein SRU_0129 171483 - 170200 - | putative light- and oxygen-sensing transcription regulator TERM 108 171082 - 171067 - G 79 -2.4 -5.10933 | GGACGCAAAACAAAA CGTGCC GTAC AGCTCG CCCTCCACCTCAATC TERM 109 171408 - 171437 + g 86 -4.8 -5.14563 | overlap 171409 AGGGCAGGTCCAGGT GCCGCCGGCCGA GGTCAA TCAGGCGGCGGG TTTTTTCCTCAAAGG SRU_0130 172660 - 171722 - | GumN protein TERM 110 173357 - 173387 + H 100 -13.4 -5.07275 | gap 1 CTCTTGCGCTCTGCC GCCTTCGTGACGC GTCCCG GCGTC-CGAAGGC TTTTTCTGTGTCTCA SRU_0131 173679 - 174653 + | ribonucleoside-diphosphate reductase, beta subunit TERM 111 174711 - 174734 + F 74 -5.2 -4.56597 | gap 1, overlap 174711 174715 ACGGGCTCGTCCTGT GGGG-GCTCCT CGA AGGCGCTTCCC TTTTTCCAACCCGAA SRU_0132 174757 - 177555 + | ribonucleoside-diphosphate reductase, alpha chain SRU_0133 177606 - 178052 + | thioesterase family protein SRU_0134 179294 - 178131 - | major facilitator transporter TERM 112 179405 - 179380 - H 72 -3.9 -4.62471 | gap 1, overlap 179381 179382 TGGAAGTGCCAAAAA CTCGGAGGGCCC GCC AGGTCCCCC-AG TCCGGGATGGAGCCG TERM 113 180193 - 180172 - H 76 -10.1 -3.85698 | overlap 180128 TCGGGCGGTCAGAAA CGGCCGTCA GGCG TGACCGCCG GTGGTACAGTTCCCG TERM 114 180651 - 180618 - H 73 -3 -4.77165 | gap 1, overlap 180620 GCTTCGAGAAGAAAA CAG-GCGCACGCGTC GGCCG GGGGCGTGCGTGCTG CCCCACCGTCTTCAT TERM 115 180934 - 180921 - H 88 -3.9 -5.32699 | opp_overlap 180921 GTAAACACTAAAAAA CAAAA GTTA TTTTG TTTTAGGGTGAGGAA SRU_0135 181254 - 182819 + | hypothetical protein TERM 116 182872 - 182930 + F 75 -3 -4.82901 | gap 2, opp_overlap 182886 182887, overlap 182886 182886 182926 TCCCCGTGCCAAGCG CCCACGC-CAAGAAAG-CCCCCATCGGC ACGAG GCCGGTGGGGGGCTTTTCGGAGCGCAGC TTTTTGTAGAGCAGC TERM 117 182886 - 182915 + F 90 -13.6 -4.07568 | gap 1, opp_overlap 182886 182887, overlap 182886 182872 GCCCACGCCAAGAAA G-CCCCCATCGGC ACGAG GCCGGTGGGGGGC TTTTCGGAGCGCAGC TERM 118 182886 - 182914 + F 75 -13.8 -3.04398 | opp_overlap 182886 182887, overlap 182872 182886 GCCCACGCCAAGAAA GCCCCCATCGGC ACGAG GCCGGTGGGGGG CTTTTCGGAGCGCAG TERM 119 182914 - 182886 - f 86 -11.6 -4.1822 | opp_overlap 182872 182886 182886, overlap 182887 GCCCACGCCAAGAAA GCCCCCATCGGC ACGAG GCCGGTGGGGGG CTTTTCGGAGCGCAG TERM 120 182913 - 182887 - f 81 -15.1 -3.10611 | opp_overlap 182886 182886 182872, overlap 182886 CCCACGCCAAGAAAG CCCCCATCGGC ACGAG GCCGGTGGGGG GCTTTTCGGAGCGCA TERM 121 182971 - 182955 - f 72 -4.3 -4.58663 | AGCAGCTTTCAAAAA GGTGGCA CGC CGCAACC AATCGCCTTAGATAC SRU_0136 183046 - 183567 + | hypothetical protein TERM 122 183684 - 183670 - g 74 -10 -3.76224 | overlap 183673 CCTCCATCCACGAAA TGACCC CTC GGGTCA AGCAGTTCATTCTTG SRU_0137 183669 - 184331 + | putative phenol hydroxylase TERM 123 184574 - 184593 + F 88 -4.2 -5.26316 | gap 1, overlap 184553 184575 184576 GTGGCAGCCATTCCA GG-GGGGGG TTT CCCCTCGTC TTTTTTGTCCACTAC TERM 124 184575 - 184591 + F 71 -5.7 -4.26475 | overlap 184553 184574 184576 TGGCAGCCATTCCAG GGGGGGG TTT CCCCTCG TCTTTTTTGTCCACT TERM 125 185365 - 185400 + G 79 -16.2 -2.80816 | gap 1 GAGGAGCTGACCGAG CTCCCCGTCGAGCGGCG CTG CGACGCT-GATGGGGAG TGTCCTCAGTGCGAG SRU_0138 184771 - 185436 + | transcriptional regulatory protein, putative TERM 126 185572 - 185558 - f 75 -4.2 -4.72188 | overlap 185554 CGAAGGGAAAAGAAA GAGCAA TTT CCGCTC CTCCGACCGATGCAG TERM 127 185805 - 185778 - f 81 -13.6 -3.61654 | gap 1, overlap 185781 CATAGCTAGTCGAAA CGAGAAGGCTACT GCC AGTAGCCTTC-CG GCTCTCCAACAACCT TERM 128 185803 - 185781 - f 77 -15 -2.92792 | overlap 185778 AGCTAGTCGAAACGA GAAGGCTACT GCC AGTAGCCTTC CGGCTCTCCAACAAC TERM 129 186309 - 186291 - g 75 -3 -4.82901 | CGTGGCCCACAAAAA GCCCTC TCAGCTT GGGGGC ATCGACGTGAGCCAT SRU_0139 186124 - 186594 + | hypothetical protein TERM 130 187792 - 187768 - f 82 -11.3 -4.06678 | opp_overlap 187767 187783 AGCGAGGCAGAGAAA CCGCAGGGCCA GTC CGGCCCGGCAG GGTCTCCTCTCGGAG SRU_0140 188299 - 189342 + | hypothetical protein TERM 131 189469 - 189448 - T 71 -8.7 -3.86015 | opp_overlap 189463 CATTCCTCTCACAAA GACACCTGT CCCG ACCGGTGTC CATCGCCTCCGTGGT SRU_0141 190913 - 189441 - | methyl-accepting chemotaxis protein SRU_0142 192502 - 191423 - | universal stress protein, putative ark 193235 - 195409 + | adaptive-response sensory-kinase TERM 132 196077 - 196096 + G 71 -9.2 -3.81951 | GGCTGTACTTCGCGG CCGGGTGG CACA CCACCCCG TTTGCTCATCTCCAG TERM 133 196508 - 196450 - g 70 -10.9 -3.60151 | gap 2, opp_overlap 196449 196450 196451, overlap 196447 196453 GCTGCGAAACTACAA CGAGGCGGCC-GCCACGCTCTTT-CCGGC CTT GGCGGCAAAGAGCGCCGCCGGCCGACGCC TTTCGGATCTCCTTC TERM 134 196505 - 196453 - g 76 -15.6 -2.92144 | gap 2, opp_overlap 196449 196451 196450, overlap 196447 196450 GCGAAACTACAACGA GGCGGCC-GCCACGCTCTTT-CCGGC CTT GGCGGCAAAGAGCGCCGCCGGCCGAC GCCTTTCGGATCTCC TERM 135 198075 - 198044 - g 71 -2.8 -4.65895 | gap 1, overlap 198045 GTCGCCACGGAAAAA CGGGCTGCC-CTCCG GGA CGGAGCGGCGTACCA GGCCGTTGCCCGGTA SRU_0144 195674 - 200680 + | putative redox sensing protein SRU_0145 200982 - 201206 + | hypothetical protein TERM 136 201365 - 201331 - T 70 -9.9 -3.54543 | gap 2, opp_overlap 201332, overlap 201332 201335 ATCCATCTTCGCAAA CGCACC-GCCC-GGCCG AAG CGTCCCGGGCGGGAGCG CAGCGCCCGAGGGGG SRU_0146 203006 - 201387 - | hypothetical protein TERM 137 201703 - 201647 - G 74 -7.7 -4.25104 | gap 1 GGCCGCCCAGCAAAA GCGGGCCGGCCAGTAGCGCCAGGGGC ACCGCG GCCCCCACCGCC-CACGCCGCCACGC GCTGGGCACGGGCAT TERM 138 202539 - 202500 - G 70 -9.8 -3.6682 | GGGCAGGCACTCAAA GGCGAGCGCAACGGCCGT CACG ACGGCCGCCGTGGGCACC ACGAACAGAAGGAAC SRU_0147 203953 - 203003 - | ABC transporter ATP-binding protein TERM 139 203972 - 203985 + r 71 -5.9 -4.27617 | overlap 203938 GCGGGGGCCTGACTG GCGCT TGCC GGCGC TTTTCCTGGGATCTC SRU_0148 204870 - 203950 - | CAAX amino protease TERM 140 204108 - 204076 - G 74 -7.6 -4.21908 | gap 1, overlap 204078 CACGAGGACGTAAAA CACCCCGTCCCAGGG CACG CTCTGGG-CGAGGGG CGGCATCTGTCCCGA TERM 141 205551 - 205573 + H 76 -11.3 -3.71848 | gap 1 CATCGGATTGACTTC TCCCCCG-GC TGAA GCGCGGGGGA TTCTTCCTCACGGAA SRU_0149 205998 - 206402 + | hypothetical protein SRU_0150 207394 - 206432 - | vitamin B12-dependent methionine synthase family protein SRU_0151 208096 - 207806 - | Tat pathway signal sequence domain-containing protein SRU_0152 209954 - 208326 - | hypothetical protein TERM 142 208559 - 208547 - G 100 -10.5 -4.88405 | opp_overlap 208554, overlap 208534 AAGCCGGAAAGAAAA CGGCC TCC GGCCG GACGGGCGCGTCTTG TERM 143 210147 - 210092 - g 76 -8.9 -4.25104 | gap 1 TCTCGCCCAGGAAAA CGGAGCCCCC-CGTGACGAAACGCTC TTCGG AAGCGTCCAGTCCAGCGGGGGCTACG GCGCCCCGACGGTCG SRU_0153 209985 - 210668 + | hypothetical protein TERM 144 211288 - 211310 + F 70 -12.6 -2.86271 | overlap 211285 GTGGAGGCCACGACC TGGGCCCCGC AGC GCAGGGCCCG TGATTCTGCTCGAAG TERM 145 211858 - 211870 + G 71 -3.3 -4.60487 | overlap 211859 CTACTTCTCGACTGG GCACC GGA GGTGG TTTTTCGGGCTCCTG TERM 146 211935 - 211973 + G 75 -9.5 -4.13014 | gap 2 AGCTCACGTTCGAAT CGGGC-GGTCCGGCC-CAG CGC CTGCGGTCGGTCCTGCCAG TTTTGGGGCTGTGCG SRU_0154 211340 - 212098 + | hypothetical protein TERM 147 212186 - 212223 + T 76 -12.6 -3.53012 | overlap 212189 ACGATGGTTCTCAGG CGCGCCGGTTGGCACG GCCGAA CGCCCCAACCGGGGCG TTTGCGGAGCCCGGC TERM 148 212718 - 212740 + T 71 -13.4 -2.65354 | overlap 212715 212723 212730 CTTTGTCACCTGCTC GGCCGGTCCC GGG GGGACTGGTC TCCGTTTGGCGTCCC SRU_0155 214376 - 213279 - | hypothetical protein TERM 149 215075 - 215058 - g 79 -6.9 -4.65895 | overlap 215060 CCCTGCATTGAAAAA CTCCCCG CTCT CCGGGAG GCGCGGCGGCGCTAC SRU_0156 214728 - 215378 + | thiol:disulfide interchange protein tlpA, putative SRU_0157 216139 - 215501 - | hypothetical protein TERM 150 215858 - 215839 - G 74 -7.8 -4.25104 | gap 1, overlap 215840 CCGGCCCGACGAAAA GCCCGGCCC CGT AGGC-GGGC GCAAGGAGCAGGGTG TERM 151 216227 - 216212 - H 95 -10.4 -4.56597 | GCCCGGGCGGAAAAA CCGGAC ACGG GTCCGG AGAACGGGGACTTGT TERM 152 217065 - 217050 - g 70 -2.5 -4.62336 | gap 1, overlap 217052 AGGCGAGCCGAAAAA GAGGCC GAGCA GGCC-C GGGAGGCCGAGCAGA TERM 153 217933 - 217914 - g 70 -6.3 -4.18018 | overlap 217924 GCGGTCGAGGCAAAA GCCGACG AGATCG CGGCGGC CTCCGAAGAGCAGTC SRU_0158 216651 - 218195 + | methyl-accepting chemotaxis transducer TERM 154 218510 - 218477 - g 75 -4.5 -4.61231 | gap 1 CGATAGCGGTAAAAA GTGGAGCTCCGCCGTC TAT GGGGGCAAAGCTC-AC GCCTACCATAATGCT TERM 155 219166 - 219152 - g 70 -8.5 -3.9279 | overlap 219136 AGGCAACCCGACAAA CCGCC TCCAC GGCGG ATCAAATCAGTTCGT SRU_0159 218182 - 220098 + | methyl-accepting chemotaxis protein TERM 156 220192 - 220157 - f 77 -13.2 -3.55444 | gap 1, opp_overlap 220156 220153 220152, overlap 220160 CGGGCAGCCGCGAAA GCACCGGACGCCTCCCG AGA CGGG-GGCGTTCGGGAC GTCCATTTCACCGCA TERM 157 220189 - 220160 - f 79 -15.7 -2.91144 | gap 1, opp_overlap 220156 220153 220152, overlap 220157 GCAGCCGCGAAAGCA CCGGACGCCTCCCG AGA CGGG-GGCGTTCGG GACGTCCATTTCACC SRU_0160 220588 - 220905 + | hypothetical protein SRU_0161 221585 - 220971 - | hypothetical protein TERM 158 221443 - 221426 - G 71 -2.7 -4.58773 | TCCACCAAAGCAAAA TCGTG AAGAGGAA CACGA ACGCCGACCAGGCGA SRU_0162 221914 - 221705 - | hypothetical protein SRU_0163 222462 - 222076 - | hypothetical protein TERM 159 222152 - 222166 + g 71 -2.7 -4.63218 | overlap 222145 TCCTCGACCGTGCAG GCGCC CGTTT GACGC TTTTCTTCGACCGCG TERM 160 222319 - 222367 + g 80 -15.2 -3.44051 | gap 2, overlap 222321 222362 CTCGACGGCCCAGTG CAGG-GCCGGGCCGCCGG-GGGCC CTT GGCCCACCGGTGTGCCGGCGCGTG TTCTGCTCGTCAACA TERM 161 222321 - 222364 + g 85 -18 -2.57243 | gap 1, overlap 222319 222362 CGACGGCCCAGTGCA GGGCCGGGCCGCCGG-GGGCC CTT GGCCCACCGGTGTGCCGGCGC GTGTTCTGCTCGTCA TERM 162 222447 - 222435 - G 72 -6.9 -4.20368 | opp_overlap 222442 CGATGGCAAGAGAAA CGCAG GAG CCGCG CATGTAATCGGGCAT TERM 163 222991 - 222964 - R 100 -14.8 -5.14563 | overlap 222986 CCGTTCACCAAAAAA GCCCGGCCCCCC ACCA GAGAGACCGGGC GCTGGCAGAATCGAT TERM 164 223120 - 223075 - R 100 -18.4 -4.41895 | gap 2, opp_overlap 223075, overlap 223062 AAGCGCCAATGAAAA GCGCCCGCCCCAGC-G-GAGCC GACG GGCTCGCTACTGAGGCGGACGC TTGCCTTGATCCCCT TERM 165 223075 - 223120 + r 70 -11.8 -3.20901 | gap 2, opp_overlap 223062 223075 AAGCGCCAATGAAAA GCGCCCGCCCCAG-CG-GAGCC GACG GGCTCGCTACTGAGGCGGACGC TTGCCTTGATCCCCT TERM 166 223579 - 223557 - R 88 -7.7 -4.85782 | gap 1 CCGGCCAAAAAGAAA GCACCGG-AG GTTG CTGCCGGCGC ACGTTCCTGCGCAGA TERM 167 223729 - 223769 + r 100 -12.6 -4.52589 | gap 2, overlap 223732 223733 GGCTGGCTCATGGCT CGACCCTGCGTCGTGCCGCA AGA TG-GGCACGGCGC-GGGCTG TTTTGTCTCACAGCC TERM 168 223732 - 223767 + r 86 -14 -3.87627 | gap 1, overlap 223729 223733 TGGCTCATGGCTCGA CCCTGCGTCGTGCCGCA AGA TG-GGCACGGCGCGGGC TGTTTTGTCTCACAG TERM 169 223733 - 223766 + r 87 -17.5 -2.92094 | gap 1, overlap 223732 223729 GGCTCATGGCTCGAC CCTGCGTCGTGCCGCA AGA TG-GGCACGGCGCGGG CTGTTTTGTCTCACA SRU_0164 224385 - 223777 - | hypothetical protein SRU_0165 225250 - 224768 - | PKD domain-containing protein SRU_0166 226501 - 225416 - | hypothetical protein SRU_0167 227508 - 226501 - | hypothetical protein SRU_0168 229813 - 227543 - | hypothetical protein TERM 170 228169 - 228158 - G 72 -7.2 -4.25104 | CGTGCCGGACGAAAA CGGG TCCT CCCG GAACAGGCCGGGCAT TERM 171 230322 - 230301 - R 80 -5 -4.82901 | CTCGTCTCAGAAAAA GCGGCCCC GTTTCA GGAGGCGC CCCCCGACACTCCGA SRU_0169 231343 - 230312 - | hypothetical protein TERM 172 232034 - 232055 + G 70 -10.1 -3.67517 | CCTCTCCCGTCCTTC GGCACTGGG CCGG CGCAGTGCC TTTCAGCTGTTGCTC TERM 173 233238 - 233221 - g 78 -6.2 -4.68908 | GTGAGGCAAAAGAAA GGGCAG AGGAGG CCGCCC GGCTCAAGTCCGCGA SRU_0170 231996 - 233948 + | sensor histidine kinase SRU_0171 234611 - 233961 - | hypothetical protein TERM 174 235495 - 235529 + H 100 -12.8 -4.86731 | opp_overlap 235503, overlap 235491 TAGAAGCGTGAGCGT CGAGGGAACGCTTTCC CTC GGGAAGCGCCCCTTCG TTTTCTTTGACAAGC TERM 175 236437 - 236450 + G 75 -4.5 -4.67904 | overlap 236429 236445 CGGGCCTCGATCCTG CCGAG CGCG TTCGG TTTTTGAACTTGCTC SRU_0172 235935 - 236831 + | ABC transporter, ATP-binding protein TERM 176 238737 - 238687 - g 73 -13.1 -3.28712 | gap 1, opp_overlap 238676 CTTCGCGTGGCACAA GCTGCTGTGGGCGGCCGTGGCCCT TGCC ATGGCCACGGTCGCCCGCCTC-GC CTGGGTGCGCGGCGA TERM 177 239575 - 239593 + G 73 -9.5 -3.90241 | overlap 239542 CGTGCGCTTTCGCAC GTCCGCG CCCAC CGCGGGC TTCTTCTCGTTCCTG TERM 178 240661 - 240646 - g 70 -11.8 -3.4072 | GACGGTCGACGAGAA GCCGGC GCGG GCCGGC GTCGACCCCTTCACG SRU_0173 237008 - 240733 + | hypothetical protein TERM 179 241827 - 241805 - T 79 -9 -4.19746 | overlap 241802 241806 TGCACCTGAAAAGAA CGGAGAGCCG TCC CGGCCTCCCG GGCGCAGCGCCGCCG SRU_0174 244590 - 241846 - | hypothetical protein TERM 180 243103 - 243066 - G 70 -13.5 -3.05384 | gap 1, overlap 243070 CTGCCCCCGAGCGAA GCGAGGAGGGCGAGGT GAACTGG ACCTCGCCCACCTC-C GAGGCGGCCGTGCCC TERM 181 243150 - 243197 + g 79 -16.2 -3.0263 | gap 1 CGGCCTGCAGGGTTG CGGTCGTGC-GGCCGGAGACCGG CGC CTGGTAGCGGGCCTGCGCGACCG TATTCGACCAGTCCT TERM 182 243492 - 243448 - G 72 -15 -2.70932 | gap 1, overlap 243415 GCGGGCGCCCAACGA CCCGCCGGCGAGGGAGGTGTC GGCG GACACCTGCGCCGCCG-CGAG CATGGGGTCGAGCGT SRU_0175 245894 - 244773 - | putative anti-sigma factor TERM 183 245196 - 245238 + g 85 -13.3 -4.07568 | gap 1, overlap 245197 CGCCGCCGCGGGGTC GGCCGAGCGGGG-GGCGGCC GAGC GGGCGCCGTCCCGATCGGCG TTTTCGGGCCGAGCG TERM 184 245197 - 245237 + g 82 -16.8 -3.04398 | gap 1, overlap 245196 GCCGCCGCGGGGTCG GCCGAGCGGGG-GGCGGCC GAGC GGGCGCCGTCCCGATCGGC GTTTTCGGGCCGAGC SRU_0176 246468 - 245884 - | ECF subfamily RNA polymerase sigma-70 factor SRU_0177 248729 - 246627 - | 5-oxoprolinase TERM 185 248231 - 248181 - G 81 -5.2 -4.80453 | opp_overlap 248181 248186, overlap 248219 248220 GTAGGAGAAAAGAAA CGCGAGGGCGACGCTCTGGACG TCCTGTT CCTCGAGAACGCGGGCCACGCG GCGCACGGCCGCCTC SRU_0178 249333 - 249037 - | hypothetical protein TERM 186 249742 - 249730 - R 100 -6.9 -5.44721 | overlap 249734 AGGATGCCAAAAAAA CGGAG GCG CCCCG ACACAATCAACCGCC TERM 187 249889 - 249919 + r 70 -10.4 -3.67597 | opp_overlap 249888 AAAGTGGTGACAATG GGGCAGGGGTATTC TCT GAAAACCACTGCTC TTCTTCGATACGAAG TERM 188 249921 - 249935 + r 76 -8.6 -4.15044 | GAAAACCACTGCTCT TCTTCG ATA CGAAGA TTTGTTCGAAGAGCC TERM 189 249992 - 250014 + r 74 -2.7 -4.88407 | gap 1, overlap 249993 249994 CAGGGACCCTATCTG AC-CAGGGAA CTCA TTCCCTGTGG TTTTTGATTACCTGG SRU_0179 250409 - 250002 - | hypothetical protein TERM 190 250139 - 250101 - G 70 -5.9 -4.28254 | gap 1, opp_overlap 250105 250114 TTCGAAGACGGAAAA CGCGTCGTAGTCAGCTCG ATTG CGATCTGTCT-CAGCGCG AGCGAGAACTTTTCC SRU_0180 250783 - 250406 - | nucleotidyltransferase domain-containing protein SRU_0181 251476 - 251682 + | hypothetical protein SRU_0182 252510 - 252037 - | hypothetical protein SRU_0183 253021 - 252563 - | hypothetical protein TERM 191 253930 - 253914 - g 74 -2.1 -4.8083 | overlap 253916 GAACATTATCAAAAA CGGCCAC AGC GCGAGCG GCTCTCAGCAATACC SRU_0184 253858 - 254136 + | ISSru2, transposase insA SRU_0186 254712 - 254587 - | hypothetical protein TERM 192 254879 - 254860 - H 73 -3.4 -4.69464 | overlap 254851 254862 AAAAGACGCCAAAAA GACGACTC CAGG GAGGCGAC TACAAGGAGACGACA TERM 193 255170 - 255191 + G 87 -14.5 -3.81146 | overlap 255180 TCTCAAATTGACTTC TCCCCTCGA TGAA TCGAGGGGA TTCTTCCTTACGGAA SRU_0187 255072 - 255212 + | transcription regulator TERM 194 256620 - 256581 - f 100 -12.3 -5.5604 | gap 2, overlap 256554 256570 TTAACCAACAAAAAA CCCTGCTGGCTTGGTCTCT TGGA AGGGAC-A-GCCAGCAGGG GAGCTTACAGCTACC TERM 195 256640 - 256654 + F 74 -5 -4.60487 | TTACAGCTACCACCG TAAGCG AGA TGCTTA TTTTTCGAGATACTA SRU_0188 257015 - 258025 + | IS110 family transposase TERM 196 259131 - 259144 + T 74 -2.4 -4.85599 | GTCCCGTTCACATGT TGAG ACCCGC CTCA TTTTTGTCACGTACA TERM 197 260593 - 260613 + T 74 -10.4 -3.82031 | gap 1, overlap 260593 AAGGAGTCCGTGTAT CCC-CCGGC TGAA GCCGGAGGG TTTACTGCTCCTTCA SRU_0190 264255 - 260644 - | hypothetical protein TERM 198 261123 - 261166 + g 73 -15.1 -2.87132 | CCTTCTCCTCCGCAT CCGGCCGGAGCTCCCCCGC GGCAAG GCGGGCCTGCTCCGGCAGG TCTATCGGGCCGGCC TERM 199 261409 - 261435 + g 74 -7.9 -4.21194 | opp_overlap 261402 GAGCAAAGCGCTTTT GAGGCGGCTGG CCTCC TCGGCCTCCTC TTTTGCCTCCTCGGC TERM 200 261985 - 262003 + g 81 -8 -4.62783 | overlap 261984 CTTTTCCTGACGTTC GCGGAGGG CCT CCTCCCGC TTTTTGCGCTCGGTA TERM 201 262944 - 262918 - G 74 -7.8 -4.2123 | CACCGACTGAAGAAA CTCCTCCCGGTG GCC CTCCGGGACGCG CTCTGCAAACCGCCT TERM 202 264379 - 264367 - H 76 -6.3 -4.4634 | AAGGCCAAGAAGAAA TTTGG CTA CCAAA GCAATGGCTACCAAA TERM 203 265671 - 265682 + H 80 -5.8 -4.74215 | TCAAGCCGCTCAGCG GCGT ACTG ACGC TTTTCTTCGTAGTCT SRU_0191 266473 - 266871 + | IS605 family transposase orfA TERM 204 267970 - 267939 - g 73 -12.4 -3.37499 | gap 1 GAACATTCGAAGGAA GTATGTCGGGTCTGA CGA TCAGACCCGTC-TAC CTGGGGTCATGGCTT SRU_0192 266875 - 268065 + | IS605 family transposase orfB TERM 205 268098 - 268077 - f 76 -11.5 -3.6968 | GTAGAACGCGAAGAA TCTCCCGGC TTCA GCCGGGGGA GAAGTCAACGAAGGT SRU_0193 268122 - 268388 + | hypothetical protein SRU_0194 268385 - 268642 + | hypothetical protein SRU_0195 269788 - 268835 - | hypothetical protein TERM 206 271579 - 271600 + r 73 -11.5 -3.62522 | opp_overlap 271593 GTATCTTTTGACTTC TCACCCGGC TAAA GCCGGGAGA TTCTTCACGGGCTTC SRU_0196 272837 - 271623 - | IS605 family transposase TERM 207 273302 - 273272 - g 70 -11.8 -3.36878 | overlap 273273 GCGACGGACGGACAA CGTGAGTGCGTACG TCA CGGACGCCCTCACA GAAAAAATCGAGCGG SRU_0197 273162 - 273449 + | hypothetical protein SRU_0198 273511 - 273918 + | PilT domain-containing protein TERM 208 274028 - 274075 + F 73 -12.6 -3.15249 | gap 1, opp_overlap 274039, overlap 274039 TGTGAACTGCGCCCA CCTCGCGAAGACGGCCGACGGCG GAT CGCAGACGGCGGT-TTCTCGGGG TTCATCGGCGGTCTG TERM 209 274039 - 274065 + F 74 -9.2 -3.89881 | opp_overlap 274039, overlap 274028 CCCACCTCGCGAAGA CGGCCGACGGCG GAT CGCAGACGGCGG TTTCTCGGGGTTCAT SRU_0199 274156 - 274566 + | glycosyl transferase SRU_0200 274634 - 275893 + | IS605 family transposase TERM 210 275937 - 275916 - g 75 -11.5 -3.62522 | overlap 275904 GAAGCCCGTGAAGAA TCCTCCGGC TTTA GCCGGGGGA GAAGTCAAGGGGCGC SRU_0201 275875 - 276522 + | putative colanic acid biosynthesis glycosyl transferase SRU_0202 276522 - 276926 + | hypothetical protein SRU_0203 276937 - 277242 + | hypothetical protein SRU_0204 277233 - 277598 + | hypothetical protein SRU_0205 277878 - 277717 - | hypothetical protein TERM 211 277787 - 277808 + g 86 -7.3 -4.90918 | opp_overlap 277779 277776, overlap 277785 GCAAGGAGGGCTACG TTGTCGTTG CCCA CGACGACGA TTTTCTTCATTTTGT SRU_0206 278165 - 278497 + | hypothetical protein SRU_0207 278512 - 278955 + | PilT domain-containing protein SRU_0208 279185 - 279568 + | hypothetical protein SRU_0209 279720 - 280046 + | hypothetical protein SRU_0210 280043 - 280435 + | PilT domain-containing protein SRU_0211 281544 - 280723 - | hypothetical protein TERM 212 281556 - 281599 + H 74 -5.3 -4.54727 | gap 3, overlap 281558 GCACTCATCGCGGCA GC-CTGCGAGACGCGAGGC-CC GGA GGCGTTTCGTG-CGCGCAGTGC TTTTGATTTCGAAAA SRU_0212 281827 - 281952 + | hypothetical protein SRU_0213 282002 - 282568 + | carbamoyltransferase TERM 213 283889 - 283868 - f 73 -11.5 -3.63837 | AGAACCGCCCAAGAA TCTCCCGGC TTTA GCCGGGGGA GTGTCAAATTCGATC SRU_0214 283993 - 284106 + | hypothetical protein TERM 214 284369 - 284351 - f 73 -3.1 -4.72272 | CGCCTGGAGGAAAAA TGGGGAA TGGAG TTCTCCA CCATCAAGCAGCGCC SRU_0215 284357 - 284509 + | hypothetical protein SRU_0216 284682 - 285260 + | hypothetical protein TERM 215 285557 - 285583 + F 76 -5.6 -4.53602 | overlap 285542 GTTTCCATTCCGGCA GGCCTCCGGCCT ATC GGGACGGTGCCC TTTCTTTCGTCTGCG TERM 216 285772 - 285793 + F 88 -14.5 -3.71848 | opp_overlap 285789, overlap 285782 CTGTAGTTTGACTTC TCCCCTCGA TGAA TCGAGGGGA TTCTTCCTCACGGAA TERM 217 286073 - 286092 + F 100 -13.6 -4.34345 | CCGACAGGTTCATAT CTCCCGGA TAAA TCCGGGAG TTTTACTGCTCTCTC SRU_0217 286495 - 286638 + | hypothetical protein SRU_0218 286653 - 287111 + | hypothetical protein SRU_0219 287207 - 288538 + | IS605 family transposase SRU_0220 288749 - 289222 + | putative O-acetyl transferase SRU_0221 289879 - 290385 + | hypothetical protein SRU_0222 290735 - 291061 + | hypothetical protein TERM 218 292727 - 292706 - f 71 -11.5 -3.40899 | AAGCCCGCAGGAGAA TCTCCCGGC TTCA GCCGGGGGA GAAGTCAAATCTCTC SRU_0224 292776 - 294032 + | putative colanic acid biosynthesis glycosyl transferase SRU_0225 294420 - 295919 + | hypothetical protein SRU_0226 297318 - 296362 - | IS110 family transposase TERM 219 298156 - 298146 - R 79 -8.2 -4.37092 | opp_overlap 298146, overlap 298125 ATTTGCTGCACAAAA CCGC GAC GCGG TTGGTAAAGACTCTG SRU_0228 299772 - 299557 - | hypothetical protein TERM 220 300239 - 300218 - R 73 -11.5 -3.63837 | AGAACCGCCCAAGAA TCTCCCGGC TTTA GCCGGGGGA GTGTCAATGCAAGCA SRU_0231 306099 - 304039 - | hypothetical protein TERM 221 306461 - 306482 + H 71 -5.7 -4.29325 | overlap 306477 AATAAACAAATACGC GCACGCGCC TTGA GGAGAGTGC TTTTCGCTCTTCCTG TERM 222 308069 - 308090 + H 100 -8.7 -5.60993 | opp_overlap 308069 CGGGCTAGCAAGGGA GAGCCGC AGGCGGGG GCGGCTC TTTTTTTGTCAAAGG SRU_0232 308573 - 309118 + | hypothetical protein TERM 223 311612 - 311636 + F 75 -4.3 -4.7373 | gap 1, opp_overlap 311612 CAAAAGAGCTACAAT CGGCGTATCA ATCGGA TGA-GCGCCG TTTTTGCTCCACTGG SRU_0234 312355 - 312651 + | transcriptional regulator, AbrB family protein SRU_0235 312638 - 313039 + | hypothetical protein TERM 224 313713 - 313754 + F 83 -12.9 -3.85698 | opp_overlap 313713 313724 GGTTGAGCGCGAGAA GGGCCGTAAAACTCCCGGC TTTA GCCGAGAGATATACGGACC TTTCTCGCCCAGCGG TERM 225 313754 - 313713 - f 84 -15.1 -3.31144 | opp_overlap 313713, overlap 313724 GGTTGAGCGCGAGAA GGGCCGTAAAACTCCCGGC TTTA GCCGAGAGATATACGGACC TTTCTCGCCCAGCGG TERM 226 313743 - 313724 - f 82 -11.4 -4.10007 | opp_overlap 313713, overlap 313713 AGAAGGGCCGTAAAA CTCCCGGC TTTA GCCGAGAG ATATACGGACCTTTC SRU_0236 313832 - 315058 + | transposase TERM 227 315133 - 315112 - g 85 -15.9 -3.71848 | TCGCGTGAGCAAGAA TCCCCCGGA TTTA TCCGGGGGA GAAGTCAAGGCGAAG TERM 228 315604 - 315631 + G 74 -12.8 -3.6106 | gap 1, opp_overlap 315598 315601 GGCCAACAACGACGA CGCGATTGGCGAT CTC ATCGCCGA-CGCG TTTGAGCGTGTTGGG TERM 229 316732 - 316691 - g 72 -12.9 -3.09516 | opp_overlap 316658 CTGCTGACCACCGAA GCTGTAATCGCCGACCTCG AAGA CGAGGACGACGACGACGGC GGTGGCGGCGGTGGC groEL 315101 - 316813 + | chaperonin GroEL TERM 230 316903 - 316873 - f 84 -14 -3.78775 | opp_overlap 316873 TCTCCTACGACGAAA GCTGCCCTTCCC GCTTCTT GGGAGGGGCAGC TTTTTTGTTTGTCCC TERM 231 316873 - 316903 + F 100 -16.9 -5.72622 | opp_overlap 316873 TCTCCTACGACGAAA GCTGCCCTTCCCG CTTCT TGGGAGGGGCAGC TTTTTTGTTTGTCCC TERM 232 316986 - 317007 + F 88 -14.5 -3.71848 | opp_overlap 317003, overlap 316996 CTGGGGATTGACTTC TCCCCTCGA TGAA TCGAGGGGA TTCTTCCTCACGGAA TERM 233 317236 - 317255 + F 83 -9.2 -4.34345 | overlap 317239 AGAGAGTCCGTGTAT CACCCGCC TAAA GGCGGATG TTTTACTGCTCTCTC SRU_0238 317533 - 319095 + | alkaline phosphatase family protein, putative SRU_0239 320610 - 319474 - | lipoate-protein ligase A SRU_0240 321066 - 320611 - | hypothetical protein TERM 234 320724 - 320707 - G 73 -4.1 -4.64591 | gap 1 GAACGAGAGATAAAA GCCTGTGC CGA GCAC-GAC CACGAGGAGGGCAAA TERM 235 321123 - 321158 + r 77 -13.1 -3.56727 | opp_overlap 321141, overlap 321128 CTCTGGGGAGGCACG CGCCCCGACGCGAGG AAAGAG CGGCGCGCCGGGGCG TTCTCGTTCCTTGCA SRU_0241 321432 - 321202 - | hypothetical protein TERM 236 321303 - 321322 + g 77 -3.5 -4.72497 | CGATGTCCGGGGGAT CCTCCTG GAAGCG CACGAGG TTTTGTTCGTCGATC SRU_0242 322200 - 321532 - | hypothetical protein SRU_0243 322656 - 322210 - | ferredoxin SRU_0244 323040 - 323690 + | hypothetical protein SRU_0245 324454 - 325992 + | FAD dependent oxidoreductase, putative TERM 237 326526 - 326510 - g 74 -5.8 -4.56597 | overlap 326511 TCGGCTTCGGAAAAA CGGGCT TCGGG AGCCCA TGAAACTGCCACCGA TERM 238 326701 - 326689 - g 70 -6.2 -4.2349 | GTTCGACATCGAAAA CGGC TTCTG GCCG ACGCTCGTCGGGCTC SRU_0246 326456 - 327484 + | hypothetical protein SRU_0247 328638 - 329267 + | hypothetical protein SRU_0248 330429 - 329551 - | CAAX amino protease TERM 239 330651 - 330607 - R 71 -8.6 -3.90744 | overlap 330608 CTGGCCTTGAAATAA CCGCTGGCCTCCTCAGGG-TAG CCG CTGGCCCTGAAGTAGCCAG-GG CAGGAGGAAACAGGA TERM 240 330929 - 330939 + r 76 -6.8 -4.45577 | overlap 330918 330912 CAGATCGCCATTGGC GCTG TTG CAGC TTTTCTGGCGTTTAT TERM 241 331095 - 331132 + r 80 -14.8 -3.12327 | opp_overlap 331090 331088 331087, overlap 331093 GCCGAAAGGATCAGG TCCGGCTGGCGAGCCG ACCGGC CAGCTCGCCGGACGGA TGTTCAATCTCGGCA SRU_0249 332404 - 331736 - | hypothetical protein TERM 242 332138 - 332125 - G 73 -9.5 -3.93744 | overlap 332120 GGAGAAAGAACAGAA GGCCG GACG CGGCC CCCCAGCGCTGGGAT TERM 243 332348 - 332327 - G 84 -13.1 -3.96148 | CGGGCGGAGGACAAA CGGTTTTGC AGGC GCAAAACCG GTAGGCGCAAAAAAG TERM 244 332999 - 332964 - H 71 -5.5 -4.33928 | gap 1 CACTTCAAAGAGAAA CCGAAAAACACC-GAG CGCAC CTCCGGCTTCTTTCGG GGCCGAACTGATAAG SRU_0250 333393 - 333485 + | hypothetical protein TERM 245 335559 - 335545 - g 77 -10 -3.99374 | GCCCACCAAGAAGAA CTCCTC CGA GAGGAG CCTCCATCCTTTGAG TERM 246 335878 - 335862 - g 79 -2.1 -4.99861 | opp_overlap 335871 335874, overlap 335864 CATCAACGACAAAAA CGGCCAC CAC GTCGGCG ATGCTGTTCTGATGG TERM 247 336246 - 336225 - g 83 -3.7 -5.14163 | gap 1 AGGGAGCAAGAAAAA CACCTC-CCT CCG AGCTGAGGTG CGACGTGGCATCGAC TERM 248 336919 - 336933 + G 95 -5.6 -5.46706 | CGGGACCTCGGCTGC CCACTG GGC CAGGGG TTTTTGTTTTCCCGT SRU_0251 333682 - 337038 + | sensory box/GGDEF family protein, putative TERM 249 337270 - 337314 + G 70 -9.8 -3.64488 | gap 1, overlap 337303 TTTGGGGTTGTCGTC GCGGAGACGCGCCTG-CCCGG ACGT TCGGGCCTGGAGCTGCTCCGC TCTTTTCCGACGCTT SRU_0252 337039 - 337509 + | TcrA SRU_0253 337527 - 338651 + | HEAT repeat-containing PBS lyase SRU_0254 338747 - 340051 + | glycosyl transferase, group 2 family protein SRU_0255 340089 - 340892 + | hypothetical protein TERM 250 341900 - 341913 + F 72 -3.8 -4.66163 | opp_overlap 341896 341898 341895, overlap 341896 341898 341881 TTTCCGAAAACGAGG CGGA CTCCCC TCCG TTTTTGGGTGCAGCT SRU_0256 342129 - 342500 + | (p)ppGpp 3-pyrophosphohydrolase TERM 251 343078 - 343067 - f 72 -7.2 -4.12942 | overlap 343057 343058 343068 GCAAATGGGCGAAAA CGCC ACTG GGCG ACAACGCCGCTGGGC SRU_0257 343338 - 343784 + | hypothetical protein SRU_0258 345489 - 344731 - | alginate biosynthesis regulatory protein SRU_0259 346502 - 345525 - | histidine kinase family protein TERM 252 346263 - 346245 - G 70 -5.9 -4.2828 | GCTCATGTAGGAAAA CGCGCTC CAGAT GAGCGTG GCCGCGGAGGCAGTG lnt 348369 - 346834 - | apolipoprotein N-acyltransferase TERM 253 348485 - 348499 + H 76 -5.6 -4.66537 | overlap 348486 AATGAGCGGTTGACT TCGCCC AGT GGGTGG TTTTGTGTTCGGCGC SRU_0261 348791 - 349354 + | osteoblast specific factor 2-related protein TERM 254 349460 - 349482 + T 100 -16.3 -4.18303 | opp_overlap 349460 CAAGGAGCTTGCAAA GGGCGTGGC CGGTC GCCACGCCC TTTCTCGTTTGTGGT TERM 255 349482 - 349460 - T 91 -16.3 -3.56568 | opp_overlap 349460 CAAGGAGCTTGCAAA GGGCGTGGC CGGTC GCCACGCCC TTTCTCGTTTGTGGT TERM 256 349763 - 349742 - T 76 -7.3 -4.3129 | CATTCACGAGCAAAA CGGCTATAC GGCC ATACAGCCG GAAAAGCGTAACGCA TERM 257 350192 - 350236 + T 80 -5 -4.89852 | overlap 350184 350181 TGCGCTGGCCTTACA GGCTCGTTTCGGAGTT CCTCCCCCGCTCC TGCTCCGAGGCGAGCC TTTTTGTGGCTATGG TERM 258 350274 - 350327 + T 95 -16.7 -3.92075 | gap 1, opp_overlap 350266 CGGCAAAGACTGGTT TGGCCTGTCTCAGAGCTCCCGC-GCC TCG GGCCGCAGACCCTCTGAGGCAGGCCA TTTCTACATGCGGAT SRU_0262 353328 - 352939 - | TonB, putative SRU_0263 353389 - 353487 + | hypothetical protein SRU_0264 354580 - 353651 - | hypothetical protein TERM 259 354273 - 354241 - G 76 -14.9 -3.08679 | opp_overlap 354206 CGCGTTGACGCAATA CGATTTGACGCAACG GGA CGTCGCGTCGAACCG GGGGCCGCCGAAACG SRU_0265 355718 - 354768 - | hypothetical protein TERM 260 355695 - 355682 - G 83 -2.3 -5.24989 | GGAGACAGGAAAAAA CACGG GTGC CCACG AGACGGTCGGTCATG TERM 261 355970 - 355948 - R 83 -9 -4.25104 | GCGCCTCGAGGAAAA TCGCCGGGCC GGT GGAGCGGCGA TCCCCGATAGCCGGG TERM 262 356655 - 356701 + r 72 -13.7 -2.71712 | gap 2, opp_overlap 356652, overlap 356654 356657 GCCCCCCGAACACCC CG-GAGCTGGGCC-CCAAGCCGG GCT CCGGCTCGTCGGTCCGGCTCTCG CTTTCGGGCCGCGAC TERM 263 356657 - 356698 + r 77 -15.1 -2.64155 | gap 1, opp_overlap 356652, overlap 356655 356654 CCCCCGAACACCCCG GAGCTGGGCC-CCAAGCCGG GCT CCGGCTCGTCGGTCCGGCTC TCGCTTTCGGGCCGC SRU_0266 358080 - 356818 - | putative glycosyl transferase N-acetylglucosaminyltransferase), RgpG SRU_0267 358762 - 360381 + | hypothetical protein SRU_0268 361548 - 360472 - | hypothetical protein TERM 264 360705 - 360755 + g 77 -7.5 -4.36914 | gap 2, overlap 360735 GCCGCTTCAGCGTTG CCGTCACCGTCGCGGTGTCGGTGGC GCT GACGTCGAC-CCGCCG-GGTCACGG TTTTATGCCCGAGAC recG 363876 - 361774 - | ATP-dependent DNA helicase RecG TERM 265 363801 - 363763 - G 78 -15.2 -3.28712 | opp_overlap 363795 363797 GCGGCGGGGGTAGAA GCGCAGCAGGTCGTGCAC CGT GCGCACGCCATGCTGCTC CGCCCACACGTCGGC TERM 266 363933 - 363902 - R 78 -6.6 -4.63932 | gap 1, opp_overlap 363902 GATCGCGGAAGAAAA CGGATGTGTGG-ACA CTG TGTACCGTACATCCG TCGTCTCGATCCGTC SRU_0270 364691 - 364005 - | hypothetical protein SRU_0271 365109 - 366554 + | hypothetical protein SRU_0272 366829 - 367239 + | hypothetical protein SRU_0273 367232 - 367687 + | phosphodiesterase/alkaline phosphatase D-like protein TERM 267 368384 - 368372 - g 70 -6.2 -4.17657 | overlap 368381 CAGCAGAGGGGAAAA GGGC AACGA GCCC ACCCGGGGCCCCGGC SRU_0274 368061 - 369338 + | collagen a1 TERM 268 369611 - 369645 + F 90 -15.7 -3.72576 | overlap 369612 CCCCACGACCAGGCA GTGCCATCCGGGGAG CGACC CGCCCCGGATGGCAG TTTGATGACACCCCC TERM 269 369612 - 369644 + F 91 -19.2 -2.83403 | overlap 369611 CCCACGACCAGGCAG TGCCATCCGGGGAG CGACC CGCCCCGGATGGCA GTTTGATGACACCCC TERM 270 369997 - 369969 - g 72 -11.6 -3.62275 | ATGGAGGAGCTGAAA GGCTTCCGGCAG TGGGG CAGCCGGACGCC CGGCCACCCGGAGGC tkt 369681 - 371711 + | transketolase TERM 271 371745 - 371688 - f 76 -13.9 -3.14132 | gap 1 CGGGTCGCCGAGGAA GCCCGCTCGCTGGTGCGGGGGTAGGGCC CCG AGCCCCCGCCCCGCACGC-CGGACGGGC GAGATCGGCCCGTCC SRU_0276 371828 - 372508 + | putative translaldolase SRU_0277 374208 - 372586 - | sodium/glucose cotransporter TERM 272 374306 - 374286 - R 81 -4.5 -5.00884 | overlap 374288 AGCGCTCCTAAAAAA GCGCTCCCG AGG CGCAGGCGC AAGGCGACGGGCGGC TERM 273 374374 - 374339 - R 76 -6.1 -4.55023 | gap 2, overlap 374341 TTGAAGAGCACAAAA CAGCGGTGCGGGCCCCA GGGC CGGGGCC-ACAGCGC-G CAAAAACGAGTCGGT TERM 274 374373 - 374341 - R 76 -9.8 -3.87977 | gap 1, overlap 374339 GAAGAGCACAAAACA GCGGTGCGGGCCCCA GGGC CGGGGCC-ACAGCGC GCAAAAACGAGTCGG TERM 275 374394 - 374381 - R 72 -3.8 -4.59109 | CACAGCGCGCAAAAA CGAG TCGGTG CTCG TCGGCGAGGGCGTCG SRU_0278 375644 - 374655 - | hypothetical protein TERM 276 375568 - 375580 + g 70 -10.5 -3.64703 | opp_overlap 375567 CCGGTCCGAACCCAC GCCCC CAT GGGGC TTTCGGTGAACCGAG SRU_0279 376764 - 375691 - | hypothetical protein SRU_0280 377438 - 376761 - | hypothetical protein SRU_0281 378696 - 377533 - | glycosyl transferase, group 1 family protein SRU_0282 379535 - 378750 - | hypothetical protein SRU_0283 380173 - 379694 - | hypothetical protein SRU_0284 380491 - 380598 + | hypothetical protein SRU_0285 380669 - 381445 + | hypothetical protein TERM 277 381517 - 381480 - f 71 -11.3 -3.44529 | gap 1, opp_overlap 381481 CGAGACATGAACCAA TCGACGGGGCCCGCGTCT TGA AGA-GCATGTCCCGTCGA ATCAGCTTGCCCTTT TERM 278 382059 - 382077 + G 77 -10.2 -3.92373 | overlap 382060 382062 CTGCACCCGAGAGGT CGACGCGG CGG CCGCGTCC TTTCTCGATCGGGTG TERM 279 382060 - 382076 + G 72 -13.7 -2.95102 | overlap 382059 382062 TGCACCCGAGAGGTC GACGCGG CGG CCGCGTC CTTTCTCGATCGGGT SRU_0286 381541 - 382545 + | hypothetical protein SRU_0287 382588 - 383052 + | hypothetical protein SRU_0288 383123 - 384013 + | alpha/beta fold family hydrolase SRU_0289 384104 - 384421 + | hypothetical protein SRU_0290 384458 - 384832 + | TM2 domain-containing protein SRU_0291 386785 - 384848 - | peptidoglycan N-acetylmuramoylhydrolase TERM 280 385765 - 385799 + gT 81 -9.9 -4.11216 | gap 1 CGAACTCGTCGTACA GGTCGCCCAGGT-GCC GGGC GGCCGCCCGGGTGGCC TTTTCCGGGTCGCGC TERM 281 386322 - 386360 + gT 75 -14.5 -2.71364 | gap 1 CGTTCGAGGGCGTCC GGCCGGGTGCGGAGCAGG GTGG CCAGCTCCGC-CATGGCC TGGTTGAGGAGGTGG SRU_0292 387911 - 386727 - | putative transport protein TERM 282 387077 - 387066 - GR 70 -7.2 -4.0162 | overlap 387067 TTCCCAGATGAGAAA GGCG GCCA CGCC ACACAGGATGAGCCC SRU_0293 388084 - 387917 - | hypothetical protein SRU_0294 388879 - 388187 - | ABC transporter, nucleotide binding/ATPase protein SRU_0295 389165 - 388887 - | hypothetical protein SRU_0296 391107 - 389188 - | S41 family peptidase SRU_0297 394610 - 391125 - | S41 family peptidase SRU_0298 395075 - 394641 - | BlaI/MecI/CopY family transcriptional regulator TERM 283 395654 - 395628 - g 71 -12.2 -3.33696 | CTGGGCCGCAAGGAA CGGGAGGCGGTG GAG CACCGGCTCACG GCGGGCGAGCTCGAC recQ 395334 - 397157 + | ATP-dependent DNA helicase RecQ TERM 284 398763 - 398753 - f 74 -4.6 -4.57073 | opp_overlap 398756, overlap 398755 GAGCTGGGCCAAAAA CCGC GGT ACGG CCCCCGTCCGTCCTG TERM 285 398909 - 398883 - f 82 -11.4 -4.07568 | GTCCGTGGCCGAAAA CCGTCCCGACCG CCC CGGACGAGTCGG AGTCCAGACCACAGC SRU_0300 399757 - 402441 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 286 402534 - 402571 + F 100 -12.6 -5.24129 | overlap 402535 402537 ACGTACGAGACTGAT TTTCGCGGCGCCCTCC CGATGT GGAGGGCGTCGCGTCG TTTTTTGTGCAGAAG TERM 287 402535 - 402570 + F 84 -13.9 -3.73995 | overlap 402534 402537 CGTACGAGACTGATT TTCGCGGCGCCCTCC CGATGT GGAGGGCGTCGCGTC GTTTTTTGTGCAGAA TERM 288 402537 - 402568 + F 100 -20.9 -3.44801 | overlap 402535 402534 TACGAGACTGATTTT CGCGGCGCCCTCC CGATGT GGAGGGCGTCGCG TCGTTTTTTGTGCAG SRU_0301 402598 - 405210 + | bifunctional aspartate kinase/diaminopimelate decarboxylase protein SRU_0302 405909 - 405235 - | hypothetical protein SRU_0303 405955 - 406722 + | hypothetical protein TERM 289 406930 - 406942 + F 71 -4.7 -4.4009 | TCAGCAGATCCCACC GCGCC CAT GTCGC TTTTGTGCAGTGCCG umuD 406996 - 407418 + | umuD protein SRU_0305 407473 - 408753 + | protein umuC TERM 290 410399 - 410356 - g 77 -13.1 -3.55444 | gap 2 GCTCCACCGCCCAAA CCGCGACGCCG-AGC-CCGGC AAGC GCCGCCGCTACGTCGCCGCGG CCATCGCCGCCCACT SRU_0306 408911 - 410557 + | RNA-biniding protein SRU_0307 413603 - 410616 - | hypothetical protein TERM 291 413883 - 413868 - H 74 -2.4 -4.8622 | GTCGTCAAGGAAAAA CCAACG TGCG CGGCGG GGGCAGTATTATTGT nosZ 414287 - 416176 + | nitrous oxide reductase precursor TERM 292 416201 - 416230 + G 100 -17.9 -3.84246 | opp_overlap 416205 GCGCGGAAGGGGGAA GGGAGAGGGGGCG TGTC CGCCTCCTCTCTC TTTCGTGCTTCCGCG TERM 293 416362 - 416392 + G 79 -6.7 -4.61231 | GCGACTCTTGCTCGT GGTGGGGGCTGCG CTGCT CGGGGCCGCCATC TTTTTGCCGCTGTGG SRU_0309 416177 - 416959 + | hypothetical protein nosD 417050 - 418447 + | NosD protein SRU_0311 418444 - 419124 + | NosF protein TERM 294 419428 - 419486 + F 78 -15.2 -2.6933 | overlap 419429 GTTCTTGTATCTGGT GCCGCTCTTTGGGCTGCTCGTCGGCG TAAGCGC CGCCCACGAGGAGCGCGACGAGCGGG CGTTTTTGTGGAGCC SRU_0312 419494 - 420978 + | hypothetical protein coxB2 421496 - 422017 + | cytochrome c oxidase subunit II TERM 295 422083 - 422100 + G 70 -10.5 -3.64259 | overlap 422098 ATCGTCGCGTTCGTG GCCCTCG GCAT CGGGGGC TTCTTCGGCCTCATT TERM 296 423264 - 423249 - g 70 -2.4 -4.66833 | overlap 423250 GCTCAAGTTCAAAAA CCTGGC CCTG GCCCAG CCCTACACCTGGTTC coxA2 422014 - 423687 + | cytochrome c oxidase subunit I SRU_0315 423694 - 424419 + | hypothetical protein TERM 297 424483 - 424520 + F 72 -11.9 -3.28712 | gap 1, overlap 424484 TTTGTCTTTTTCCCC GAGGCTCGGTGGCTCCCG GGA CGGG-GCGACCGAGCCGA TTCTGACGAGGCGAG TERM 298 424484 - 424519 + F 77 -15.4 -2.57132 | gap 1, overlap 424483 TTGTCTTTTTCCCCG AGGCTCGGTGGCTCCCG GGA CGGG-GCGACCGAGCCG ATTCTGACGAGGCGA SRU_0316 424642 - 425451 + | GntR family transcriptional regulator SRU_0317 426712 - 425513 - | putative filamentous hemagglutinin SRU_0318 427561 - 426785 - | hypothetical protein TERM 299 427567 - 427613 + r 95 -20.2 -3.28712 | opp_overlap 427554 427552, overlap 427568 GAGGGGGCACCTCGC CCTCGATGCGGTCGAGCCGGTC GAG GGCCGCCTCGATCGTATCGAGC TTGTCGAGGAGACGG TERM 300 427568 - 427612 + r 100 -23.7 -2.57132 | opp_overlap 427554 427552, overlap 427567 AGGGGGCACCTCGCC CTCGATGCGGTCGAGCCGGTC GAG GGCCGCCTCGATCGTATCGAG CTTGTCGAGGAGACG SRU_0319 428438 - 427842 - | hypothetical protein TERM 301 427947 - 427967 + g 70 -11.1 -3.54424 | opp_overlap 427953 GGGATAGTCCTTCTT GACGAACGC GGG GCGCTCGTC TTTGGGGCCGTGGCA TERM 302 428474 - 428455 - H 74 -2.2 -4.82901 | GGTTGGGGAGAAAAA TGATCT GGCCGTGA AGATCA GCAGGACGACCGCCA TERM 303 428603 - 428629 + G 88 -10.1 -4.41895 | gap 1, overlap 428602 AGTTCGACGTTGAGC GGGCCACGGCCG GTCT CGTCC-TGGCCC TTTTCCTTGCCGCTT SRU_0320 428566 - 428796 + | hypothetical protein SRU_0321 428793 - 429011 + | hypothetical protein SRU_0322 429042 - 430556 + | putative cytochrome-c oxidase SRU_0323 430601 - 431197 + | cytochrome c oxidase, cbb3-type, subunit II SRU_0324 431254 - 432033 + | cytochrome c family protein SRU_0325 432247 - 434214 + | heavy metal translocating P-type ATPase subfamily protein TERM 304 434321 - 434340 + F 72 -7.8 -4.18494 | gap 1, overlap 434321 TGGCAGGCCGACCCA C-CGCGTGG TGG CCGCGCGCG TTTTCGGTAGAAATG TERM 305 434489 - 434461 - g 75 -16 -2.78816 | opp_overlap 434454 434469 CTACGCTTCACGACA CGACGTGCGGAG GGGGG CTCCGCGCGTCG CCCCCTGTCCATTGT SRU_0326 434440 - 436005 + | metallo-beta-lactamase superfamily protein TERM 306 436020 - 436063 + F 83 -12.2 -4.01184 | GCATCGCCGAAGCGC CGCGGTGGGGGCGTCCGGCG AGCG TGTCGGGGGCGCCCCTCGCG TTTCTGCTCCTCTGT TERM 307 436144 - 436170 + G 77 -14.4 -3.39327 | TCGTCGGCTTGGTGC TCGGCCTCCTGG GGT CCGGGGGGTCGA TTCTCACTGTGCCCG SRU_0327 436101 - 436865 + | domain of unknown function, putative TERM 308 436983 - 436969 - f 84 -11.4 -4.17657 | CATCAGACGGCAAAA GGCGAC GAG GTCGCC CCGTCCGGCTCGGGT TERM 309 437842 - 437854 + G 85 -10.5 -4.24745 | GCCGCAGCCCCTCAT GGCGG TTC CCGCC TTTCTGTTCGTGCTC TERM 310 437863 - 437881 + G 79 -6.7 -4.59773 | gap 1, overlap 437866 437878 TCCCGCCTTTCTGTT CGTGCTCG TCTT CGAGC-CG TTTTTGCCGATCGGC gufA 437300 - 438049 + | gufA protein SRU_0329 438243 - 438755 + | general stress protein 20U TERM 311 438779 - 438807 + F 100 -20.3 -5.24799 | opp_overlap 438777, overlap 438731 GGACGTGCAGACATG GCCCCCGTTTCCG GAC CGGGAGCGGGGGC TTTTTCTGTTTGTAG TERM 312 439381 - 439365 - g 72 -5 -4.56597 | overlap 439367 GCGCGCCCTCAAAAA CGCCGC CCAAC GCGCCG AGGGGGACCTCACGC TERM 313 441117 - 441174 + G 81 -14.8 -3.61398 | opp_overlap 441114 CCTCCGCATGAAGCC GGCGGCCCGCTCC-CTCGGGCTCACG CTGAGCGA CGTG-GCCCGGCAGGTGCGGGCGGCC TTCTTCGGCACGGAA SRU_0330 438907 - 442050 + | cation/multidrug efflux pump TERM 314 442107 - 442078 - g 72 -14.2 -3.01712 | opp_overlap 442106 CCTTGCGTCTGAACA CCACGGGGGCGC ATTGCG GCGTCCCCGCGG CCATCCGACCGGCCT SRU_0331 442055 - 442642 + | hypothetical protein SRU_0332 443393 - 442680 - | TENA/THI-4 family protein SRU_0333 447008 - 443673 - | two-component system sensor protein TERM 315 446918 - 446931 + g 70 -5.9 -4.18018 | GGCCGCGGAGGCGAT CTCGG TAGG CCGGG TTTTCAATCGGGACC SRU_0334 447815 - 447192 - | Ser/Thr protein phosphatase family protein TERM 316 447584 - 447531 - G 77 -5.8 -4.59773 | overlap 447532 GCCGAGGCCGAAAAA CGGGGTGCCGTCGATCGTCGTGC-CG CCGC CGTGCAGCACGTGCG-CGGCGCCCCA GCCGGCGGCGTCGAT TERM 317 447749 - 447714 - G 77 -13.9 -3.35679 | CCGGGCCACGCAGAA GTCGCCGGCGCCGAC CACCAC GTCGACGTCGGCGGC GCGGTCGACGAGGCG SRU_0335 450297 - 447916 - | heavy-metal transporting CPx-type ATPase TERM 318 451390 - 451400 + G 72 -4.6 -4.56597 | overlap 451389 AGGAACTGCTCATCA GCGT CAC GCGC TTTTTCCGGACGCCA TERM 319 452447 - 452420 - g 70 -13.4 -3.01712 | gap 1 GGTCTGTTTTGAAGA GGCCGACGCCCCG GGG CGGGGCGT-GGAC GAGGATGGCGAGGCG cheB 450312 - 454091 + | protein-glutamate methylesterase CheB SRU_0337 454227 - 455039 + | undecaprenyl-diphosphatase 1 TERM 320 455220 - 455265 + F 72 -13.9 -2.74012 | gap 1 GGCCTTCCGCTCGCG GGACGACTGCTCGACCGGTACG GGC CGCGCCGGGTG-GCCGTCGTCC TGATTGCGCTACTCG SRU_0338 455681 - 456508 + | ABC transporter (substrate-binding protein), putative SRU_0339 456656 - 458173 + | Era/ThdF family GTP-binding protein SRU_0340 458390 - 459118 + | phosphatidylcholine synthase SRU_0341 459869 - 459165 - | hypothetical protein SRU_0342 460908 - 459874 - | paraquant-inducible protein B SRU_0343 461709 - 460942 - | ABC transporter, ATP-binding protein SRU_0344 463020 - 461905 - | ABC transporter, permease TERM 321 462889 - 462916 + g 70 -11.2 -3.59979 | GGTGTCGAAGGCGAC CGCCGCCACG GGGCTCGA CGGGGCGGCG TTTACCATCACGGCC SRU_0345 463438 - 463926 + | hypothetical protein SRU_0346 464910 - 464218 - | OmpA family protein TERM 322 464999 - 465018 + r 72 -12.1 -3.28712 | overlap 464997 465014 CCGGACGCGAAGTTG CCGCCGG GTTCCG CCGGCGG TTGTGGGACCGCGGC SRU_0347 466028 - 465045 - | oxidoreductase family protein pncB 467725 - 466337 - | nicotinate phosphoribosyltransferase SRU_0349 470710 - 467867 - | hypothetical protein TERM 323 469585 - 469601 + g 77 -3.5 -4.82901 | overlap 469587 469589 AATCGTCCGGCGCGA CCCGGGC CTC GACCGCG TTTTTGTACCCGGCG TERM 324 469708 - 469736 + g 71 -12.3 -3.28924 | opp_overlap 469702 469705 CGTAGTACACGATCG GCTCGGCCGGCTC CAC GAGCTCGCCGCGC TTGTAGGCCGCGGTG SRU_0350 471486 - 470962 - | hypothetical protein TERM 325 471783 - 471763 - R 78 -3.1 -5.06414 | TTTTGCGAACAAAAA CCGTGCCCT CTC AGAGACCGG GGGTGGTGCTCGGGA SRU_0351 474194 - 472071 - | putative DNA helicase TERM 326 477624 - 477665 + G 70 -6.6 -4.18018 | gap 3, opp_overlap 477612 AACCTCGGGTTCCAC TACCG--GAGCGGCCGCACCG TGA CGGTG-GGCCTCTCGACGGAA TTTTAGGTCGACACG cirA 474624 - 477671 + | TonB-dependent receptor TERM 327 477703 - 477743 + GF 79 -11.1 -3.88291 | overlap 477706 ACACTTGTCGTTCCT CACACGTCCCCTTCCCC GTCGCCG GGGGAGGGGGATGCATG TTTCTGCCCATCCTG SRU_0353 477692 - 478780 + | sensory transduction histidine kinase TERM 328 479034 - 479044 + GT 71 -3.2 -4.59853 | GATGGCACCGGAAGC GGTC GAC GATC TTTTTGAGCCGTTCC SRU_0354 478750 - 479253 + | sensor histidine kinase SRU_0355 481699 - 479882 - | sodium/glucose cotransporter 2 SRU_0356 482710 - 481763 - | IS982 family transposase TERM 329 482060 - 482050 - G 72 -4.6 -4.56597 | CGTTTTTTCCAAAAA GCCC CGT GAGC CAGTCCCCGCAGTAC TERM 330 482296 - 482283 - G 81 -3.7 -4.98255 | overlap 482284 TTCGAAGGAGAAAAA CCGGC CTCA GCCGC CCAAATCGACATCTG SRU_0357 482972 - 484111 + | LacI family transcription regulator SRU_0358 484205 - 487273 + | outer membrane protein SRU_0359 487206 - 488975 + | outer membrane protein SRU_0360 489206 - 490531 + | hypothetical protein TERM 331 490574 - 490616 + F 81 -14 -3.66654 | overlap 490576 490577 ATCTGTAGCGATCGG CGTCAGAGGCGCACTGGCCC AAT GCGCCGGTGCGCCTCCGGTA TTTCGCCTTCGCCTG TERM 332 490576 - 490614 + F 95 -18.8 -3.41222 | overlap 490574 490577 CTGTAGCGATCGGCG TCAGAGGCGCACTGGCCC AAT GCGCCGGTGCGCCTCCGG TATTTCGCCTTCGCC TERM 333 490577 - 490613 + F 90 -20.1 -2.64412 | overlap 490576 490574 TGTAGCGATCGGCGT CAGAGGCGCACTGGCCC AAT GCGCCGGTGCGCCTCCG GTATTTCGCCTTCGC TERM 334 492737 - 492719 - g 75 -6.7 -4.30576 | CTCCTACTACGAAAA CCGATCG GGGTA CGATCAG GCCAGCTTCATTTCC TERM 335 492847 - 492875 + G 100 -7.4 -5.27335 | gap 1 GAAATTTTGAGACGG CCCT-CAACCGGC AGAA GCTGGTCGGAGGG TTTTTCTTTACCACG TERM 336 493534 - 493556 + G 72 -8.3 -4.07568 | AGGCGGCCTTCGGCA CGCCCGGCG ACACG TGGCGGGCG TTTTACGAAACGGGG TERM 337 493729 - 493709 - g 81 -3.9 -5.00616 | opp_overlap 493720, overlap 493711 CTCTCTGCGAAAAAA TCGAGCGCA CAT TCCGCTCCA CGAGGGATGGAATAT TERM 338 494178 - 494202 + G 73 -10.8 -3.73224 | gap 1, overlap 494172 GTGGTGCCCACGGCT GCCGATTCGGT GCGG ACCGA-TCGGC TTTCGTACCCCCTCC SRU_0361 490677 - 494705 + | putative alpha-amylase SRU_0362 495285 - 497120 + | glycosy hydrolase family protein SRU_0363 497799 - 497197 - | hypothetical protein SRU_0364 497844 - 498554 + | 5-formyltetrahydrofolate cyclo-ligase SRU_0365 498678 - 499937 + | putative sugar transporter TERM 339 501155 - 501176 + GF 77 -12.3 -3.66178 | gap 1, opp_overlap 501129 501154, overlap 501159 GCGCCGTCGAATCAG GACGCGGCGC TCA GCGCCG-GTC TTTCGAGTTGGGGAG TERM 340 502836 - 502814 - gf 75 -3.2 -4.82901 | opp_overlap 502827, overlap 502817 502819 CTGTCGGGAGAAAAA GAAGTGCTGG GCA CCGGCGCCCC CGACTGGACGCTCGG TERM 341 502827 - 502817 - gf 77 -6.8 -4.52873 | overlap 502814 502819 TCGGGAGAAAAAGAA GTGC TGG GCAC CGGCGCCCCCGACTG SRU_0366 500333 - 503419 + | hypothetical protein SRU_0367 503394 - 505100 + | hypothetical protein TERM 342 505140 - 505161 + F 100 -13.7 -5.72053 | opp_overlap 505138 505136 CGAGAAAACCACAGG GGAGGGCCT ACGC GGGCCCTCC TTTTTTCTTTGCTTG chb 505170 - 507827 + | beta-N-acetylhexosaminidase TERM 343 508911 - 508934 + G 78 -13.9 -3.54424 | GCCGGCTACGCGGTC CCCGACGAG GTCGCA CTCGTCGGG TTTGACGACCTGCCC rbsR 508116 - 509129 + | ribose operon repressor TERM 344 509372 - 509386 + G 74 -5.6 -4.51174 | overlap 509368 509370 GACGCTTTCTCTTGA CGACGA TCG TCGGCG TTTTCGTTCTCGTCC TERM 345 509490 - 509466 - g 72 -5.5 -4.40561 | overlap 509467 CGCCGCGAAAAACAA TCCCGAGAGCG AGG CGCCCCCGCGC ACCTACGCCATCTAC SRU_0370 509131 - 510483 + | hypothetical protein SRU_0371 510792 - 512636 + | Na+/proline symporter TERM 346 514157 - 514191 + G 83 -9.3 -4.38712 | gap 1, opp_overlap 514144 514171 AACGACCACCTGGCG GACGCCGCAGACTACG ACGT CGTGGTC-GTGCCGTC TTTTCTCCGCGTGCA TERM 347 514735 - 514717 - g 76 -14.6 -3.14132 | CGCCTCGCTCACGAA GGTGGTGG CCA CCACCACC GCCGTCATGAAGCTC TERM 348 515539 - 515594 + G 72 -14.7 -2.70932 | gap 3, opp_overlap 515532 TCGAATCACGCAGGT GCGTCCGCGGGCGGCC-GAC-ATCGTGC ACC GCGCGATCGACGGGCCGCCC-CGCCCGC TGCTTCCCGGCCCCG SRU_0372 512684 - 515623 + | beta-N-acetylglucosaminidase TERM 349 516163 - 516138 - g 100 -2.3 -5.75342 | overlap 516139 516140 CCCTGGTAAAAAAAA CCCTTCGGGCC CAAC GGCCCGTCGAT CACCTGTCGGTCTGT SRU_0373 515966 - 516880 + | N-acetylglucosamine kinase, putative SRU_0374 516877 - 518781 + | transporter, solute:sodium symporter (SSS) family protein TERM 350 518787 - 518770 - f 78 -9.8 -4.00756 | GACGCCACTAAAGAA GGGGCC GAGTAG GGCCCC CGTGGACCGGCACAA SRU_0375 518896 - 519126 + | hypothetical protein SRU_0376 519126 - 519365 + | hypothetical protein SRU_0377 519716 - 519369 - | hypothetical protein SRU_0378 520107 - 519742 - | hypothetical protein TERM 351 520670 - 520623 - g 75 -14 -3.28924 | gap 1, opp_overlap 520631 520633 CATCGCGCGTCACAA CGGCACGGCG-GGCGAGCCGGCC TCC GACCGGCCCGCCTCGTTTTACCG CTCGGAGCTTGAAAC TERM 352 520631 - 520662 + G 85 -13.6 -4.11216 | gap 1, opp_overlap 520623, overlap 520633 GTCACAACGGCACGG CG-GGCGAGCCGGCC TCC GACCGGCCCGCCTCG TTTTACCGCTCGGAG TERM 353 520633 - 520659 + G 76 -15 -3.09004 | opp_overlap 520623, overlap 520631 CACAACGGCACGGCG GGCGAGCCGGCC TCC GACCGGCCCGCC TCGTTTTACCGCTCG SRU_0380 520447 - 520917 + | CBS domain-containing protein TERM 354 520924 - 520955 + T 86 -15.9 -3.66095 | gap 1 ACGATGTAGCGGGCA CGGGCGG-CGTGTG TCCGC CGCACGACCGCCCG TTTCCCTACCGGTTT SRU_0381 522571 - 520961 - | carboxypeptidase-related protein kbl 523807 - 522614 - | 2-amino-3-ketobutyrate coenzyme A ligase SRU_0383 524941 - 523934 - | epimerase/reductase, putative SRU_0384 525246 - 525743 + | AsnC family transcriptional regulator TERM 355 526934 - 526920 - g 73 -12.8 -3.36327 | CGACGGCATCGAGAA GGGGCG CTC CGCCCC CGACCCGGTCCGCGA glnA 525778 - 527175 + | glutamine synthetase, type I TERM 356 527251 - 527199 - f 100 -24.2 -3.48593 | gap 1, opp_overlap 527211, overlap 527202 GATTTGGTGAGACAA CGAGCGTCGAAGCGGCCGGTGCCCC GAGC GGGGCACCGGCCGTTTCTACGG-CG GATGAGGAGACCCGT TERM 357 527249 - 527202 - f 100 -25.6 -2.88822 | opp_overlap 527211, overlap 527199 TTGGTGAGACAACGA GCGTCGAAGCGGCCGGTGCCCC GAGC GGGGCACCGGCCGTTTCTACGG CGGATGAGGAGACCC TERM 358 527211 - 527240 + F 100 -26.5 -3.86015 | opp_overlap 527202 527199 CAACGAGCGTCGAAG CGGCCGGTGCCCC GAGC GGGGCACCGGCCG TTTCTACGGCGGATG TERM 359 527320 - 527278 - f 82 -14.2 -3.34398 | gap 3, opp_overlap 527308, overlap 527262 527276 CCGTCGGGCGAAAGA CGGGCGGC-C-GACGCGGCGG CGGT CC-CCGCTTCCGCGCCGCCCG GAGAGGGCCGGAGCC purB 527382 - 528794 + | adenylosuccinate lyase TERM 360 529477 - 529493 + G 90 -3.6 -5.42259 | opp_overlap 529478, overlap 529478 ACCTGTCTTTCGAAG ACCGTG GGGCA CACGGG TTTTTTTACAACTAC SRU_0387 529038 - 530900 + | glycosy hydrolase family protein SRU_0388 530897 - 531406 + | hypothetical protein SRU_0389 532009 - 531512 - | hypothetical protein TERM 361 531676 - 531692 + g 77 -13.7 -3.38178 | overlap 531684 GTGGCAGCGTGTTGG CGGCCTC GCC GAGGCCG TTCTGAAATTGCTTC SRU_0390 532435 - 532088 - | hypothetical protein SRU_0391 532643 - 533827 + | putative dipeptidase SRU_0392 534054 - 536237 + | TonB-dependent receptor domain-containing protein SRU_0393 536439 - 536813 + | NADH-quinone oxidoreductase chain a SRU_0394 537009 - 537650 + | NADH-quinone oxidoreductase chain b SRU_0395 537734 - 538438 + | NADH-quinone oxidoreductase chain c/d TERM 362 538830 - 538820 - g 72 -6.8 -4.18018 | overlap 538821 CCGCGGCATCGAAAA GCTC GCG GAGC ACAAGACGTACCAGG nuoD 538494 - 539849 + | NADH dehydrogenase I, D subunit SRU_0397 539875 - 540624 + | NADH-ubiquinone oxidoreductase 24 kDa subunit, putative SRU_0398 540695 - 542089 + | respiratory-chain NADH dehydrogenase 51 Kd subunit family protein TERM 363 542278 - 542236 - g 70 -13.2 -3.04461 | overlap 542219 542218 542238 CACCGAGGCCGAAGA GACCCGGGGCACGCCCGTCG ACG CGACGGCGGCGCTCCCGGCC TCGGCCGTGGCGGCG SRU_0399 542144 - 542584 + | hypothetical protein TERM 364 542765 - 542735 - f 74 -13.2 -3.34239 | overlap 542733 TACATTCAGAGAACA GGGGACCTCGGAGC CGG GCTCCGAATACCCC CCTGATGCTTTCCGC nuoG 542810 - 544549 + | NADH dehydrogenase i, g subunit SRU_0401 544752 - 545135 + | hypothetical protein TERM 365 545659 - 545682 + G 77 -3.8 -4.81852 | overlap 545641 545660 CACTGATCGCCATCA TCGTGCTGTT CGAG AGCATCACGG TTTTCTTCCTTCTGG SRU_0402 545229 - 545879 + | hypothetical protein SRU_0403 545996 - 547699 + | NAD(+) synthase (glutamine-hydrolysing) TERM 366 547936 - 547897 - g 73 -12.7 -3.35996 | GACCTTCACGGAGAA CCCGGGCATGGCGTTCG GCATCA CGATCGGCCCGCCCGGG ACCGTAACCGTCCTC lspA 547763 - 548500 + | signal peptidase (SPase) II lepA 548658 - 550472 + | GTP-binding protein LepA SRU_0406 550559 - 551431 + | hypothetical protein TERM 367 552490 - 552542 + G 75 -3.2 -4.72272 | gap 2, overlap 552491 CTCGTGGGACCACGA GGCATGGCTCCCGCGCTTCGGGCGCA TCC TGCGCCCC-ATTGCGGACGCCG-GCG TTTTTCGTGAACAGC lepB 551486 - 552664 + | signal peptidase I SRU_0408 553705 - 552728 - | ErfK/YbiS/YcfS/YnhG family protein TERM 368 553126 - 553148 + g 81 -4.1 -4.98255 | gap 1 TCCACTCCTCCCCGG GCG-GACTCA TCGT TGAGACCCGC TTTTTCTCCTTCCAG SRU_0409 555023 - 553788 - | potassium channel, putative TERM 369 553979 - 553992 + g 82 -4.5 -4.89852 | gap 1, opp_overlap 553958, overlap 553958 553957 CGGCCAGGGTCTGTC CG-GCC AAG GGCGCG TTTTTATGAATCTGC TERM 370 554621 - 554604 - G 86 -4.7 -5.15969 | CCCGAAGGTAAAAAA CCGACCG ACAT CGGACAG GGGACTCACCTCCTG TERM 371 554805 - 554763 - G 77 -10.6 -3.86015 | gap 1, overlap 554804 CAGGGCCGCCAGAAA GATCTCGCGGC-GGGACGG CTCCAT CCGCGCCAGCCACGAAATC AGGGCCTCCCACGGG TERM 372 554991 - 554979 - G 71 -3.3 -4.68724 | overlap 554981 CCACGCAACACAAAA CCCGC ACG ACGAG TGTCCGGTGCAGAGC SRU_0410 555731 - 555042 - | hypothetical protein TERM 373 555366 - 555335 - GH 81 -11.5 -3.91897 | TGCCGCACCCAGAAA TGTCGCCCCCTCC AACCGG GGCGGCGGCGACA ACCAGAAACCGGTCG TERM 374 556063 - 556074 + GH 79 -3.6 -4.91109 | overlap 556070 TGCAGATTCCCATCC TGGC CGGG GCCG TTTTTCTGGTCCACC SRU_0411 555705 - 556577 + | DoxX subfamily protein TERM 375 557138 - 557116 - g 73 -13.4 -3.28712 | GGGCGTGGCCGACAA CCTGGAGGCG GGG CGCCTCAAGG GCCTTGCCATCTCCA SRU_0413 556706 - 557878 + | patatin family phospholipase folA 558408 - 557848 - | dihydrofolate reductase SRU_0414 559992 - 558409 - | amidase, putative TERM 376 559911 - 559889 - G 78 -6.3 -4.66163 | gap 1 ACGGGGAGGCAAAAA CCG-ACGAAC CTTT GCTCGTACGG GGGGACGGGCCGCGA TERM 377 560020 - 559969 - G 100 -21 -5.03314 | gap 1, overlap 559972 CCCAGGCCCAAAAAA TAAGGACCCGAAGC-CCCCGGTCAA CCG TCGACCGGGGCACTTCGGGGCCCCA CCGCTCGAAAAGTCT TERM 378 560017 - 559972 - G 100 -22.7 -4.62085 | gap 1, overlap 559969 AGGCCCAAAAAATAA GGACCCGAAGC-CCCCGGTCAA CCG TCGACCGGGGCACTTCGGGGCC CCACCGCTCGAAAAG TERM 379 561466 - 561436 - g 77 -7.4 -4.4009 | opp_overlap 561456, overlap 561438 GCTGACCGTAGAAAA TACGGACGCCGAGA CCG TCTCCGCGACCGCG GTGCTTCCGGTCCGG TERM 380 561464 - 561438 - g 81 -12.2 -3.80877 | opp_overlap 561456, overlap 561436 TGACCGTAGAAAATA CGGACGCCGAGA CCG TCTCCGCGACCG CGGTGCTTCCGGTCC SRU_0415 560405 - 561538 + | putative transmembrane sensor histidine kinase transcription regulator protein algR 561614 - 562354 + | two-component system, regulatory protein TERM 381 564244 - 564198 - g 71 -15 -2.52896 | CGACCTGTCAACCCA CACGCACCGCCGCGCCACCCAC CTC GTCCGCGGCGCCACGGTGCACG ACTGGGTGCCCGCCG SRU_0417 562654 - 565602 + | hypothetical protein TERM 382 565962 - 565982 + G 79 -4.6 -4.7254 | gap 1, overlap 565964 TTTTCGGGCACGACG GAGC-CGGC GGGG GCCGAGCGC TTTTTCCTCCGGCGT TERM 383 566485 - 566501 + G 73 -3.6 -4.64766 | overlap 566476 TCACGGGACTGCGCA CGACGG GTCGG CAGTCG TTTTTCGGGTATCGA SRU_0418 565815 - 566999 + | phosphate-selective porin O and P superfamily protein thyA 568082 - 567015 - | thymidylate synthase SRU_0420 568187 - 568519 + | hypothetical protein apaG 569177 - 568668 - | ApaG TERM 384 569110 - 569097 - G 79 -4.5 -4.74706 | GCCAATACGGAAAAA CGAAG GCGT CTCCG AAAAATGCACGGCCA cysH 569303 - 570061 + | phosophoadenylyl-sulfate reductase subfamily protein SRU_0423 570217 - 572115 + | pyruvate synthase TERM 385 572493 - 572478 - g 95 -7.5 -5.14563 | overlap 572479 572480 CCGGGCACGAAAAAA CCGGC CGGGCC GCCGG GGGCAAAAAAACCCG SRU_0424 572268 - 573632 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta SRU_0425 573790 - 574200 + | DoxD-like family protein SRU_0426 574215 - 574715 + | DoxX subfamily protein SRU_0427 574708 - 575790 + | amine oxidase, flavin-containing SRU_0428 575996 - 576592 + | PfpI family intracellular peptidase TERM 386 576631 - 576659 + TF 100 -18.9 -4.52589 | GCTTCGACGAGCATG GAGCGTCGGTCCT GCT GGGACCGGCGCTC TTTTCTATGACGGCG TERM 387 576750 - 576718 - Tf 76 -11.2 -3.76952 | gap 1, overlap 576703 CGGACCGAAGGCAAA CGGACCGGCCGCACC GCTA GGGGCG-CCGGTCGG ACCCCGTTCACCCGC SRU_0429 577153 - 576758 - | hypothetical protein TERM 388 577213 - 577263 + GH 77 -12.5 -3.61591 | gap 2, opp_overlap 577200, overlap 577220 AATCGGGCCCCCGGG CGTTCGGGCCCGACGCCGTCGGGCG GGC CGTGGGGCGGCGACG--CCCGAACG TTCTCTGGCTTTTTG TERM 389 577220 - 577272 + GH 100 -9 -5.39681 | gap 2, opp_overlap 577200, overlap 577213 CCCCCGGGCGTTCGG GCCCGACGCCGT-CGGGCG-GGCCGT GGG GCGGCGACGCCCGAACGTTCTCTGGC TTTTTGTTTGGTTCT SRU_0430 577125 - 577325 + | hypothetical protein proV 577551 - 578648 + | glycine betaine/L-proline transport ATP binding protein TERM 390 579512 - 579526 + G 82 -6.4 -4.82901 | overlap 579506 AGGGGGGACTGGCCA TCGTCA TTC TGGCGA TTTTTCTGGACCGCA SRU_0432 578719 - 579597 + | glycine betaine/L-proline transport system permease protein proW TERM 391 579637 - 579677 + F 75 -11.9 -3.66578 | gap 1, opp_overlap 579636, overlap 579637 579634 AGGCTCCTGCAACAT G-GCCCGGACGAGGGC GTCAGGACTG GCCGTCGTCCGGGCAC TCTTCTTTGCTTTGC SRU_0433 579777 - 580730 + | ABC transporter, substrate-binding protein TERM 392 580759 - 580790 + F 100 -20.2 -4.36914 | GTTTTGACGACGCAG CACCCCCGATTGCC GTCC GGCGGTCGGGGGTG TTTTATGGACGGACA TERM 393 580802 - 580857 + F 83 -12.5 -3.82433 | gap 1, overlap 580807 GGTGTTTTATGGACG GACATGGCGCCGACAG-GCCCGCGCA CGCCC TGCGCGAGCGCTCTTGGTGCCTTGCC TTTCATGCTACTTCT TERM 394 580807 - 580852 + F 77 -14 -3.31415 | gap 1, overlap 580802 TTTATGGACGGACAT GGCGCCGACAG-GCCCGCGCA CGCCC TGCGCGAGCGCTCTTGGTGCC TTGCCTTTCATGCTA TERM 395 581154 - 581165 + G 72 -7.2 -4.2828 | overlap 581152 AAGGAAGCCCAGGGC GGCG GCAT CGCC TTTTCGTCGGTGGCG SRU_0434 580893 - 581912 + | glycine betaine ABC transporter glycine betaine-binding protein, putative TERM 396 583356 - 583337 - g 83 -2.2 -5.1356 | gap 1, overlap 583338 GGTGACGAACAAAAA CGTCGATTC TTG GAAT-GACA ACGCTACCCACGACA SRU_0435 582036 - 583538 + | hypothetical protein TERM 397 583582 - 583621 + F 100 -20.9 -4.66537 | gap 2, opp_overlap 583570 GAACGTCTCCGTACA GGGACGCAGGC--CACCGG GCCT CCGGTGCCGCCTGCGTCCC TTTTGTATTGGGGCC SRU_0436 583629 - 584774 + | hypothetical protein SRU_0437 586052 - 584811 - | major facilitator transporter TERM 398 585855 - 585821 - G 87 -17.1 -3.46602 | overlap 585822 585824 TCCCGTACAGCAGAA TGAGCCGGCGCCCGA TGCGG TCGGACGCCGGCCCC GTGATGAGGGCCGAC TERM 399 585854 - 585822 - G 95 -20.6 -2.67747 | overlap 585821 585824 CCCGTACAGCAGAAT GAGCCGGCGCCCGA TGCGG TCGGACGCCGGCCC CGTGATGAGGGCCGA TERM 400 585852 - 585824 - G 95 -19.6 -2.88069 | overlap 585822 585821 CGTACAGCAGAATGA GCCGGCGCCCGA TGCGG TCGGACGCCGGC CCCGTGATGAGGGCC TERM 401 587204 - 587219 + G 85 -7.6 -4.72272 | opp_overlap 587197 587204, overlap 587190 587197 CGACATCACGACGAA GTCGTT TCCG AACGAC TTTTTCCTAAACGCA SRU_0438 586446 - 589277 + | outer membrane protein, putative TERM 402 589338 - 589379 + F 100 -24.6 -3.85817 | gap 1, overlap 589340 ACTCCTTTTCGATTG CC-TCGAGGGGGCGAGCCA CACGT TGGCTCGCCCCCTCGGTGG TTTGTGGGAGGAAGT TERM 403 589340 - 589376 + F 100 -26 -3.00946 | overlap 589338 TCCTTTTCGATTGCC TCGAGGGGGCGAGCCA CACGT TGGCTCGCCCCCTCGG TGGTTTGTGGGAGGA TERM 404 590890 - 590860 - g 89 -3.9 -5.28942 | gap 1 GATCGTAAACAAAAA TCCGTACG-CGAGC ATCA GCCGGACGAACGGA AACGGCGCGATCCAG SRU_0439 589463 - 591094 + | outer membrane lipoprotein, putative TERM 405 591139 - 591173 + F 100 -22.9 -5.0916 | ACACGAAGCTTCCTT CGCCGGGCATCCCCG ATTGA CGGGGGTGCCCGGTG TTTTTGTGTTGGGGC SRU_0440 591270 - 592451 + | hypothetical protein SRU_0441 592566 - 592811 + | hypothetical protein TERM 406 593120 - 593140 + G 70 -2.4 -4.62069 | GGGGGATCCGACCCC CGTTCCCG CTACA CGCGTACG TTTTTCACCTGGCAG SRU_0443 592811 - 593596 + | dioxygenase, putative SRU_0442 594510 - 593584 - | phosphate transport system protein PhoU TERM 407 594410 - 594378 - GT 71 -13.4 -2.57132 | gap 1, opp_overlap 594378, overlap 594377 GTCGGGTCGTAGAAG CCCGGGCC-CGGTCG TTCC CGACGGCGGCCCGAG TGGCAAGCGGCTCCG SRU_0444 595583 - 594438 - | glycosyl transferase, group 1 family protein TERM 408 595416 - 595397 - GR 81 -7.8 -4.4767 | opp_overlap 595403 CCATCGAGGAGAAAA GAACGACG TCGA CGGCGTTC TGCCGGGCGGCCCGG SRU_0445 597184 - 595679 - | putative sulfolipid synthase TERM 409 597071 - 597045 - G 73 -10.8 -3.73387 | overlap 597041 597046 ACCAGAAGAAAGTAA CGCAGGCCGTCC TCC GGACGCCCTACA CGAGGGACCGGCACC TERM 410 597085 - 597127 + g 74 -7.6 -4.1964 | opp_overlap 597092 CACGAGGGACCGGCA CCAAAAAGGCCCCAGGGA GCAGACG TCCCTGGGGCCTCTGGCG TTTTGGGATGTTGCC TERM 411 597120 - 597092 - G 100 -17.5 -4.72986 | opp_overlap 597085 GACCGGCACCAAAAA GGCCCCAGGGA GCAGACG TCCCTGGGGCC TCTGGCGTTTTGGGA SRU_0446 599802 - 597184 - | hypothetical protein TERM 412 598870 - 598897 + g 89 -3.2 -5.29445 | overlap 598872 598885 CCACGTGATCGGCTC CACCGGCTCGGA GAGC TCGGCGTCGGGG TTTTTCTTCTTCAGG TERM 413 599133 - 599149 + g 75 -4.3 -4.64598 | opp_overlap 599127, overlap 599132 599133 TTTCGAAGACGTAGT CGACGAC CAC GTCGGTG TTTTTCGGATAGTTG TERM 414 599854 - 599883 + r 81 -10.5 -4.18018 | CGGAGGGCTCCGTCG CGGGGACCGGCCG TCGT CGCCCGGGACCCG TTTTAAGTGGGACGG SRU_0447 600382 - 600086 - | hypothetical protein SRU_0448 601148 - 600450 - | hypothetical protein TERM 415 601152 - 601166 + r 78 -2.8 -5.10004 | overlap 601154 GAGCTCGACCACAGC CTGTTT TGC AAACCG TTTTTAGTTATTTTT uvrA 604375 - 601430 - | excinuclease ABC, A subunit SRU_0451 604638 - 605831 + | pyrroloquinoline-quinone glucose dehydrogenase SRU_0450 606867 - 605782 - | translation initiation factor IF-2 SRU_0452 608000 - 606864 - | M23 peptidase domain-containing protein TERM 416 607879 - 607904 + g 83 -12.6 -4.07568 | gap 1 TGGTTTGGGCCTTGT GCCCGACGTCG ATTCC CG-CGTCGGGC TTTTCCCCGCACAAG SRU_0453 608027 - 608647 + | hypothetical protein SRU_0454 608693 - 609934 + | carboxypeptidase G2 SRU_0455 609984 - 611030 + | hypothetical protein TERM 417 613518 - 613477 - g 72 -8.5 -4.15044 | gap 1 TGGGCGTCGAAGAAA GGCGAGCAGAACGGCCCGGC CGG GCAGGGCGGCACGG-TCGCC GCGGCGAAGAAGGAG ileS 611236 - 614478 + | isoleucyl-tRNA synthetase SRU_0457 614557 - 615033 + | putative RNA polymerase-binding protein DksA ruvA 615198 - 615806 + | Holliday junction DNA helicase RuvA prsA 615844 - 616821 + | ribose-phosphate pyrophosphokinase TERM 418 616944 - 616917 - T 72 -12 -3.34192 | gap 1 AAGGGGGCGAACGAA TGGGAAGCCGGCC TCG GGCCG-CGTCCCA GACGAAGGGGACAAC SRU_0460 617587 - 617006 - | hypothetical protein SRU_0461 617656 - 618219 + | deoxycytidine triphosphate deaminase mutM 618307 - 619104 + | formamidopyrimidine-DNA glycosylase SRU_0463 619169 - 619909 + | hypothetical protein SRU_0464 619952 - 620977 + | putative ATPase typA 621390 - 623312 + | GTP-binding protein TypA SRU_0466 623936 - 623361 - | hypothetical protein dnaJ 625394 - 624396 - | dnaJ protein accC 625491 - 627011 + | acetyl-CoA carboxylase, biotin carboxylase SRU_0469 629473 - 628448 - | hypothetical protein TERM 419 629831 - 629819 - R 77 -2.7 -5.06451 | CATGACCGGAAAAAA CTTCT GCT AAAAG TGGAGCAACAAACAT SRU_0470 636421 - 630413 - | sensory histidine protein kinase TERM 420 635431 - 635445 + g 74 -10 -3.78775 | CGGCCAGCTTCACGG GGGCAT CCA ATGCCC TTTCGTCCTGCGAGG TERM 421 635477 - 635465 - G 70 -6.2 -4.25104 | GTCCTGCGAGGAAAA CGGG GGGCG CCCG ATAACCTGTACGGCG SRU_0471 636832 - 636458 - | hypothetical protein TERM 422 638051 - 638029 - R 91 -7 -5.28826 | AAACGCTACAAAAAA CAATCCGG ACTCGTG CCGGATCG TGCGGGCCCCCAGGC SRU_0472 640398 - 638191 - | HTR-like protein TERM 423 639065 - 639039 - G 73 -12.9 -3.28712 | opp_overlap 639028 GGTCCGGGCCGAGAA CCTCCCGGGGC GTCTT GCCCCGGACGG ATTCCGAGTCCAGTC TERM 424 639337 - 639353 + g 86 -9.3 -4.63486 | CGAGGAGCCATCCTT GCGGCGG TGG CGGCCGC TTTTCTTGGCCCGGT TERM 425 639888 - 639920 + g 77 -12.6 -3.69216 | overlap 639886 CGAACTGGTAGCGGC CCGCCCGGTCCTTG ACGTA CACGGCCTGGGCGG TATTTTCGATGAGCG SRU_0473 643777 - 640562 - | AcrB/AcrD/AcrF family multidrug efflux protein SRU_0474 644307 - 643774 - | hypothetical protein SRU_0475 645557 - 644373 - | RND family efflux transporter MFP subunit SRU_0476 647130 - 645682 - | putative outer membrane efflux protein SRU_0477 648127 - 647213 - | transcriptional regulator, TetR family protein SRU_0478 648194 - 648682 + | peptidyl-prolyl cis-trans isomerase, cyclophilin-type TERM 426 648911 - 648864 - f 73 -10.7 -3.64822 | gap 2, opp_overlap 648902 648905 648906, overlap 648904 ACCCCCCGACGGAAA GGTGCC-C-CATCCTGCCTCGAC TGCT GTCGAGGAAAGATGAGTGGGACC CGCGACCCTTTTGGT TERM 427 648933 - 648961 + F 100 -8.8 -5.58522 | opp_overlap 648904, overlap 648905 648902 648928 CCTTTTGGTTGCTGA TCCCCATCTGCT TTCCT GGCGGCTGGGGA TTTTTCTTTTGTCTC TERM 428 649019 - 649066 + F 70 -10.1 -3.6269 | gap 1, overlap 649007 649009 649017 CCTCCGGGCCTGTCC TCGGCTCTTCTGGATGAGCA CTTGCGTCC TCTTCATCCAG-AGAGCCGA TCTTTCTATGAGTGC TERM 429 649379 - 649394 + G 70 -2.5 -4.59773 | gap 1, opp_overlap 649332, overlap 649379 649380 CGTCGCCACCGCCAG C-GGGC AGTCC GCCCAG TTTTTGGCCCTCAAC cysD 649032 - 650444 + | O-acetylhomoserine sulfhydrylase metX 650575 - 651633 + | homoserine O-acetyltransferase TERM 430 651879 - 651866 - g 89 -3.7 -5.26316 | opp_overlap 651866 CGACGGCATAAAAAA CGCGG TCCG CCTCG TTCATGCCGCCACCG lysC 651765 - 652718 + | aspartate kinase SRU_0482 652742 - 653866 + | bifunctional aspartokinase/homoserine dehydrogenase I SRU_0483 658079 - 654039 - | histidine kinase DhkJ TERM 431 654890 - 654903 + g 77 -3.1 -4.89852 | gap 1 TCGCGGAAGACGATC CGGTAG CAA CT-CCG TTTTTGTCGGTCTGC TERM 432 655056 - 655113 + g 79 -3.3 -5.09259 | gap 1, opp_overlap 655035 655032 655092, overlap 655043 655098 GAGCCCGGTGCCCCC GTGCTCCCGGCTCTTCGACGC-ATCG ACCTGAC TGAACGACTCGAAGAGCCGGTCGCGC TTTTCTTTTGGGATG TERM 433 658635 - 658610 - R 100 -18.3 -4.84527 | CGCAGACACGAAAAA GGCCCCCTGCC TGGG GGCAGGAGGCC TCGATGGGGACAGGG TERM 434 658686 - 658665 - R 89 -12.9 -4.2123 | overlap 658661 GAGTCAGGCAAGAAA CGGCCGGGC CGCC GCCTGGCCG AGAGCGGCTAGGCCG sdhB 659425 - 658694 - | succinate dehydrogenase iron-sulfur subunit sdhA 661347 - 659512 - | succinate dehydrogenase flavoprotein subunit SRU_0486 661823 - 661371 - | succinate dehydrogenase, membrane subunit, putative SRU_0487 662370 - 661876 - | putative succinate dehydrogenase membrane subunit TERM 435 662293 - 662316 + g 72 -8.8 -4.04806 | overlap 662302 CTCGGCGGTCGCGTT CGTCTCTTGG GGCG CCGAGGGGCG TTCTTTGGTGTCAAC TERM 436 662520 - 662573 + r 71 -13.8 -2.57344 | gap 1, overlap 662519 CCGCTCCGCGATGGG CGCCACGGTCCGGTCGCGGGCCC CCACATACT GGGCGCGCGGTCGGATCA-GGCG GTTGTCGGCCCACTG citA 663857 - 662502 - | citrate synthase SRU_0489 664474 - 666264 + | ribonuclease SRU_0490 666347 - 666631 + | hypothetical protein SRU_0491 666621 - 667496 + | metallo-beta-lactamase superfamily protein aroQ 667561 - 667989 + | 3-dehydroquinate dehydratase SRU_0493 668158 - 668634 + | metal-dependent hydrolase mviN 668733 - 670430 + | integral membrane protein MviN TERM 437 670981 - 671030 + G 70 -4.2 -4.57073 | gap 3, overlap 671006 671012 CGGTCAGCTCGAAGG CGAGCTCGG-GGAG-GAGGC-CTGG ATT CCGGCGCCCGGCGCCGCCGAGTTCG TTTTTGACACCGATC SRU_0495 670568 - 671134 + | hypothetical protein TERM 438 671905 - 671889 - g 70 -8.7 -3.92963 | overlap 671880 CAAGAAGGAGAACAA CCTCCAC AGC GTGAAGG ACCAGCACTTCCTGG nuoI 671446 - 672054 + | NADH dehydrogenase i, i subunit SRU_0497 672239 - 672724 + | hypothetical protein holA 672803 - 673846 + | DNA polymerase III, delta subunit SRU_0499 674024 - 674740 + | hypothetical protein TERM 439 674899 - 674933 + F 82 -10.7 -4.08064 | gap 1, overlap 674902 674906 AGGGCCCACCGCTTC CTC-TCAAGCCTCCGG ATGA CCGGGGGCTTGGTGCG TTTTGGAGGGCCCTT TERM 440 674902 - 674929 + F 78 -15.6 -2.74605 | overlap 674899 674906 GCCCACCGCTTCCTC TCAAGCCTCCGG ATGA CCGGGGGCTTGG TGCGTTTTGGAGGGC TERM 441 674906 - 674925 + F 74 -12.8 -3.27786 | overlap 674902 674899 ACCGCTTCCTCTCAA GCCTCCGG ATGA CCGGGGGC TTGGTGCGTTTTGGA TERM 442 675566 - 675528 - g 73 -12.3 -3.40403 | GCGCCCCCACGAGAA CTTCACCGGGCCCTCCA TGCCT CGGTGGACCCGGCGACG CTCGGCGACGCCGCC SRU_0501 675099 - 675659 + | hypothetical protein SRU_0502 675722 - 676126 + | low molecular weight protein-tyrosine-phosphatase SRU_0503 676682 - 676215 - | hypothetical protein TERM 443 676661 - 676635 - G 100 -10 -5.36441 | opp_overlap 676635 CCGGCACAGAAAAAA GCCCGGACCCCC ACC AAGAGACCGGGC TTTGGGAGAAATGTG SRU_0504 677710 - 676772 - | putative RNA methyltransferase TERM 444 677650 - 677663 + g 72 -4.5 -4.56775 | GCTTGGAGGGGAACC GTCGG CCGT TCGAC TTTTTGGCGGAGAAT gdhA 677767 - 679071 + | glutamate dehydrogenase SRU_0507 679068 - 681128 + | hypothetical protein SRU_0508 681176 - 682804 + | sugar kinase TERM 445 683074 - 683095 + G 77 -3.7 -4.72272 | gap 1, overlap 683075 GAGGCTCTCGGCGTG C-TTTCGTCG GCG CGGCGGAATG TTTTTCGTCGGGGGG SRU_0509 682856 - 683269 + | hypothetical protein SRU_0510 683629 - 684123 + | TonB TERM 446 684157 - 684186 + T 100 -22.9 -6.23317 | TCTGGTCCGTTTCAG CGCGCACCGTGGG AGCA CCCGCGGTGCGCG TTTTTTTGTTTTTGT rpiA 685058 - 684234 - | ribose 5-phosphate isomerase A SRU_0512 685443 - 685033 - | hypothetical protein uvrd 687702 - 685564 - | ATP-dependent DNA helicase soj 688018 - 688938 + | SpoOJ regulator protein spo0J 689005 - 689985 + | spoOJ protein SRU_0516 690103 - 690813 + | hypothetical protein TERM 447 690976 - 691018 + F 74 -9.1 -3.90112 | gap 1, opp_overlap 690974 690975 CCGGGCCCGAGAACT GTAGCACCCCACGCAGCGGG AAGC CCCGG-GCGTCGCGTGTTAC TTTCGTTCGGAGCGG TERM 448 691679 - 691667 - g 72 -5.5 -4.3739 | CAGGGGCGCAGAAAA GCCTC GCG GAGAC CAAGCGGTACCGTCA bioF 691144 - 692457 + | 8-amino-7-oxononanoate synthase TERM 449 692495 - 692533 + G 100 -17.5 -4.13945 | opp_overlap 692471 692495, overlap 692472 692492 TTCGGCCCGTAATGA CGCCGTCGTTTTCCGAT CTGTC GTCGGGAAGCGGCGGCG TTTTCGCATGGCCCT SRU_0518 692491 - 693741 + | hypothetical protein SRU_0519 693806 - 694504 + | haloacid dehalogenase-like hydrolase, putative SRU_0520 695198 - 694506 - | putative integral membrane protein purQ 695994 - 695287 - | phosphoribosylformylglycinamidine synthase I SRU_0522 697626 - 696091 - | very long chain acyl-CoA dehydrogenase-related protein TERM 450 697915 - 697868 - R 100 -15.7 -4.88736 | gap 1, opp_overlap 697879, overlap 697870 697874 GAGGATGGACAAAAA CACGAAGAGGAGGAAGGCCGAG GCAAT CTCGACCTCCCTCCTCT-CAAG ACGCACGATGGCGGG TERM 451 697913 - 697870 - R 100 -16.9 -4.06182 | gap 1, opp_overlap 697879, overlap 697868 697874 GGATGGACAAAAACA CGAAGAGGAGGAAGGCCGAG GCAAT CTCGACCTCCCTCCTCT-CA AGACGCACGATGGCG TERM 452 697910 - 697874 - R 100 -21 -3.64205 | opp_overlap 697879, overlap 697870 697868 GGACAAAAACACGAA GAGGAGGAAGGCCGAG GCAAT CTCGACCTCCCTCCTC TCAAGACGCACGATG ssb 698461 - 697955 - | single-strand binding protein TERM 453 698682 - 698672 - R 77 -2.4 -4.96996 | overlap 698673 GCCAAACAAAAGAAA TGCC TGG GGCC GTCCCGGCGCTTGCA TERM 454 698779 - 698740 - R 100 -18.7 -5.88565 | gap 1 CTCACAACAAAAAAA GCCGGGCAGATGCG-CTC ACCCA AAGACGCACCTGCCCGGC AAGGATGGAGGCCTC SRU_0524 699793 - 698978 - | beta-D-galactosidase, putative TERM 455 699952 - 699931 - H 75 -13.7 -2.99471 | gap 1 GTACCGTCACAGAGA CGGG-CGGGG AGG CCCCGGCCCG GTCGGTGGGGAACAG TERM 456 700058 - 700075 + H 80 -5.5 -4.77036 | overlap 700059 TAATATTCAAAGCCC TGAGCCC AAAA GGGTTCG TTTTTCGTCCTGCCC SRU_0525 700295 - 700600 + | hypothetical protein SRU_0526 700681 - 701505 + | hypothetical protein udk 701565 - 702236 + | uridine kinase TERM 457 702228 - 702275 + T 82 -6 -4.82901 | gap 1, opp_overlap 702239, overlap 702228 702230 GAACAGGGAACGCTG CAG-GCATAGCACCGGCACGCCG CCC CAGCGGGCGGGGGCTACGCGCGG TTTTTCTCCGCAAGC SRU_0528 703036 - 702266 - | putative transcriptional regulator SRU_0529 703861 - 703064 - | biotin--acetyl-CoA-carboxylase ligase SRU_0530 704761 - 703925 - | hypothetical protein TERM 458 704404 - 704378 - G 95 -10.8 -4.57073 | opp_overlap 704397 GAGGCGTGCCAAAAA TCCGCCGGCC TGGAAGC GGCCGGCCGA GTCGGCCCGTTGAAT TERM 459 704951 - 704979 + G 72 -14.6 -2.70932 | gap 2 GCTCCTCGACACGGC CGTGCAGGCGGCCC GCC GGGCCGCC-GC-CG TCATTCGGGAGCAGG SRU_0531 704901 - 705734 + | inositol-1-monophosphatase fabI 705791 - 706627 + | enoyl-(acyl-carrier-protein) reductase SRU_0533 706637 - 707425 + | phosphoglycolate phosphatase TERM 460 707635 - 707664 + G 72 -7.1 -4.18018 | gap 1, opp_overlap 707657, overlap 707639 GGCGACCTCGCAGGG CAG-GGCGGCGC CCTGGAA GCGACGCCGCTG TTTTACGTGGCCGAA SRU_0534 707401 - 708315 + | hypothetical protein SRU_0535 708611 - 709174 + | hypothetical protein TERM 461 709231 - 709267 + T 100 -21.6 -2.87344 | GCCCAGCGCGCCCTG CACTCGGCCCCTCTGC CCCGC GCGGAGGGGCCGAGCG TATGTGGGGGCGATC SRU_0536 710628 - 709318 - | NupC family protein TERM 462 710792 - 710755 - R 100 -16.4 -4.07568 | gap 1, overlap 710758 710761 GTCGCCCCCGCAAAA CAGCAAGGGCACCCGGC GGACG GCCGAGTGCCCCTG-TG GATGCGTCCCGGAAT TERM 463 710790 - 710758 - R 87 -19.2 -2.78032 | overlap 710755 710761 GCCCCCGCAAAACAG CAAGGGCACCCGGC GGACG GCCGAGTGCCCCTG TGGATGCGTCCCGGA TERM 464 710787 - 710761 - R 100 -17.3 -3.53779 | overlap 710758 710755 CCCGCAAAACAGCAA GGGCACCCGGC GGACG GCCGAGTGCCC CTGTGGATGCGTCCC SRU_0537 712852 - 710822 - | peptidase TERM 465 712515 - 712476 - G 77 -13.4 -3.56366 | opp_overlap 712486, overlap 712466 AAGAAGCCCCCGAAA CGGGCATCGGCGGGCACG GCGG CGTTGCCGCGGCTGCCCG TCTTGAAGTAGTTCT TERM 466 712486 - 712515 + g 78 -15.7 -3.08283 | gap 1, opp_overlap 712466 712476 CGAAACGGGCATCGG CGGGCA-CGGCGGC GTT GCCGCGGCTGCCCG TCTTGAAGTAGTTCT TERM 467 713861 - 713851 - g 74 -2.4 -4.82901 | overlap 713852 CGCCCGCCACAAAAA CCTC TGC GTGG TGGGCGACGACGCGC SRU_0538 713066 - 715426 + | ATP-dependent DNA helicase pcrA SRU_0539 715973 - 715461 - | hypothetical protein SRU_0540 716851 - 716033 - | HNH endonuclease family protein TERM 468 716938 - 716948 + r 74 -2.4 -4.82678 | TGTGCTCTGTAGACG CCGG GTA CCGA TTTTGATTTTTGTCC SRU_0541 717982 - 717083 - | hypothetical protein TERM 469 718151 - 718177 + r 75 -14.4 -2.70932 | GGGACGAGAGGGTTT CCTGTTGGGGGC CGC GCCCCCGACAGC TCATTGAGGAGGCGC SRU_0542 719051 - 718212 - | aminotransferase TERM 470 719163 - 719132 - H 71 -8.6 -3.89346 | gap 1, overlap 719136 GGTTCAGGGGAGAAA CGCAGTGGGGGACGG AGC CCATCCCCC-CAGGG AGAGCAGGCGATCGG SRU_0543 719136 - 719660 + | hypothetical protein pdxH 720445 - 719798 - | pyridoxamine 5'-phosphate oxidase SRU_0545 721405 - 720572 - | hypothetical protein TERM 471 720776 - 720812 + g 75 -14.4 -3.25823 | gap 1, opp_overlap 720762 720761, overlap 720779 720781 CCCGCGGGCGGCGAG GAGCGCCGAC-CGGGCC GCCC GGCCCGCGTCGGTGTGC TTGCTGTCCGCGACG TERM 472 720779 - 720809 + g 82 -16.9 -2.81547 | gap 1, opp_overlap 720762 720761, overlap 720776 720781 GCGGGCGGCGAGGAG CGCCGAC-CGGGCC GCCC GGCCCGCGTCGGTG TGCTTGCTGTCCGCG TERM 473 720781 - 720807 + g 77 -15.9 -2.95521 | gap 1, opp_overlap 720762 720761, overlap 720779 720776 GGGCGGCGAGGAGCG CCGAC-CGGGCC GCCC GGCCCGCGTCGG TGTGCTTGCTGTCCG TERM 474 721787 - 721801 + G 73 -4.2 -4.57837 | overlap 721788 GCAGCGACCTCACCC AGTCGA CGC TCGACC TTTTTGAGGCCGTCT SRU_0546 721429 - 722289 + | proline dehydrogenase superfamily protein SRU_0547 722945 - 722409 - | Appr-1-p processing enzyme family protein TERM 475 722847 - 722825 - G 77 -16.2 -2.52464 | opp_overlap 722813 CGGCGGCCGAATGGA GGGCGCCGGC CAC GCCGCCGCCC GACCGCAGCTGTGCG SRU_0548 723096 - 723953 + | hypothetical protein SRU_0549 723980 - 724603 + | CBS-domain-containing protein TERM 476 724765 - 724754 - f 70 -7.2 -3.97368 | opp_overlap 724755 724757 724760, overlap 724755 GGTCGAATTGATAAA GCCC CACG GGGC CCCCTATCTTGAGGA TERM 477 724755 - 724810 + F 76 -11.1 -3.76402 | gap 1, opp_overlap 724754 724755, overlap 724757 724760 GTCGAATTGATAAAG CCCCACGGGGCCCCCTATCT-TGAGG ACAGA CCTCACGGATCGGGGGTCCCGTCGTC TTTCCTCCCTCCAAT TERM 478 724757 - 724808 + F 95 -18.1 -3.46647 | gap 1, opp_overlap 724754 724755, overlap 724755 724760 CGAATTGATAAAGCC CCACGGGGCCCCCTATCT-TGAGG ACAGA CCTCACGGATCGGGGGTCCCGTCG TCTTTCCTCCCTCCA TERM 479 724760 - 724805 + F 90 -18.4 -2.87769 | gap 1, opp_overlap 724754 724755, overlap 724757 724755 ATTGATAAAGCCCCA CGGGGCCCCCTATCT-TGAGG ACAGA CCTCACGGATCGGGGGTCCCG TCGTCTTTCCTCCCT TERM 480 725679 - 725702 + G 70 -3.8 -4.57073 | gap 1 AAATGCAGCGACACG CCCGACCTCAG CGA CTG-GATTGGG TTTTTGAAGCGCCTG pyrG 724839 - 726536 + | CTP synthetase SRU_0551 727733 - 726717 - | LexA repressor, putative mraZ 727703 - 728179 + | mraZ protein TERM 481 728355 - 728410 + G 82 -16 -3.41051 | gap 1 CTACGTCGATGCGAC CCTCGGGGGGGGCGGGCACGCCCGAGC CCT GCTCGA-TGTGCTCGACCCCGACGGGG TTGTCCTCGGCATCG TERM 482 729190 - 729214 + G 74 -14.9 -3.06696 | opp_overlap 729183 729186 CGACGAGACGACGAC GAGGCGGGGGC TCC GCTCCCGCCGC TCTCTTGAGGCGGAC mraW 728212 - 729222 + | S-adenosyl-methyltransferase MraW SRU_0554 729263 - 729760 + | hypothetical protein TERM 483 729795 - 729768 - f 73 -12.6 -3.16267 | CTGAATGATACCGAA CAGCGCGCCGGG GCGT CCCGACGTGCCG GCGCCCACTCCCACT TERM 484 730066 - 730042 - gf 84 -15.7 -3.33696 | GGGCCTCGCAACGAA CACGGCCCGGT ACG ACCTGGCCGTG GACCCGACGGTGGAG SRU_0555 729827 - 731773 + | penicillin-binding protein 3 TERM 485 731919 - 731890 - g 73 -11.3 -3.72695 | ATTTGCTGGACGAAA CGATAGCGGGGGC GGAA GCCCCCGATCCCG ACACCCTCGCGATCG murE 731748 - 733316 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase mraY 733374 - 734531 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 734603 - 735985 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase SRU_0559 736130 - 737269 + | cell division protein FtsW, putative murG 737331 - 738443 + | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase murC 738524 - 739951 + | UDP-N-acetylmuramate--alanine ligase SRU_0562 740099 - 740878 + | ftsQ protein, putative ftsA 740991 - 742268 + | cell division protein FtsA ftsZ 742476 - 743795 + | cell division protein FtsZ TERM 486 743930 - 743912 - T 81 -6.6 -4.7373 | CGACCGCATCAAAAA GTGGGCCC TCC AGCCCCAC CACAGGCCGTCCGGC TERM 487 744105 - 744149 + T 93 -17.3 -3.53012 | gap 2, overlap 744112 GGCTTCCGTGCCATG CGCG-AGAGCCACGC-CCGGC CCTGC GCCGGCGCGTGGCTTTTCGTG TTTGGGAGGACGGGG TERM 488 744112 - 744141 + T 100 -17.2 -4.49756 | gap 1, overlap 744105 GTGCCATGCGCGAGA GCCACGC-CCGGC CCTGC GCCGGCGCGTGGC TTTTCGTGTTTGGGA SRU_0565 745985 - 744291 - | Serine protease / subtilase peptidase TERM 489 745148 - 745167 + g 76 -2 -4.94902 | overlap 745151 745152 GATTGTAGTTGTATT CGACCTGG CGCT CCAGCTGG TTTTTGTAGTCCTTG SRU_0566 746752 - 746024 - | hypothetical protein TERM 490 746854 - 746880 + H 90 -15.9 -3.72576 | gap 1, opp_overlap 746846 746870, overlap 746857 CACGAGAGTGCGATT GATGCCCCGCCC AGAA GGGCGGGGC-TC TTTACTCCCGCAGCA TERM 491 746857 - 746878 + H 95 -18.7 -3.44848 | opp_overlap 746846 746870, overlap 746854 GAGAGTGCGATTGAT GCCCCGCCC AGAA GGGCGGGGC TCTTTACTCCCGCAG TERM 492 747464 - 747413 - g 74 -7.9 -4.18494 | gap 2, opp_overlap 747421 747423 GACGCTCATCCAAAA CACCATC-G-CGCGGCTCCAGGGGC TCGT GCCGCCGGAGCGGTGTCTGGTGGTG ACCCACGAGCGGTAC manC 747297 - 748367 + | mannose-1-phosphate guanylyltransferase otsB 749201 - 748434 - | trehalose-phosphatase SRU_0569 750865 - 749279 - | trehalose-6-phosphate synthase domain-containing protein TERM 493 749635 - 749645 + g 70 -2.4 -4.63218 | GGTAGCGGTAGTTGA CGGG CAC CCAG TTTTCTTCGGCAAAG SRU_0570 751182 - 750862 - | hypothetical protein glpQ 752197 - 751241 - | glycerophosphoryl diester phosphodiesterase SRU_0572 754534 - 752210 - | dipeptidyl peptidase IV (DPP IV) TERM 494 753708 - 753744 + g 77 -8 -4.36262 | overlap 753688 753709 753726 TGCGGCTGGCCCCGG GCGGTGGT-GTCGACCGC CGC GAGGTCGACCACC-CCGA TTTTGATCTCGCTGT alr 754644 - 755996 + | alanine racemase drrA 756163 - 756876 + | response regulator DrrA SRU_0575 757100 - 758404 + | phosphate regulon sensor protein phoR TERM 495 758458 - 758472 + F 78 -7 -4.62069 | CTGCCTTCGCGACCG GCCGCC ACA GGGGGC TTTTTGGAGTCCCGA SRU_0576 758831 - 760933 + | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit SRU_0577 761710 - 760949 - | hypothetical protein TERM 496 761259 - 761246 - G 70 -5.9 -4.2123 | overlap 761249 GACCCAGTGAATAAA GAGCC CGGC GGCCC GAAGGAGGGCGTACC SRU_0578 762419 - 762315 - | hypothetical protein TERM 497 762660 - 762644 - H 84 -11.5 -4.13767 | opp_overlap 762647 GTGCTCAGGGGAAAA GCGGGCC CAG AGCCCGC GGCCTTCCTCGATGT SRU_0579 763329 - 763508 + | hypothetical protein TERM 498 763594 - 763555 - f 100 -12.3 -5.80364 | gap 2 ATTGCAACAAAAAAA CCCTGCTGGCCTGGTCTCT TGGA AGGGAC-A-GCCAGCAGGG GAGCTTACAGCTACC TERM 499 763614 - 763628 + F 74 -5 -4.60487 | TTACAGCTACCGCCG TAAGCG AGA CGTTTA TTTTTCGAGATACTA cysD 764276 - 765181 + | sulfate adenylyltransferase subunit 2 SRU_0581 765391 - 767310 + | sulfate adenylyltransferase large subunit SRU_0582 767367 - 767855 + | nucleotidyltransferase, putative SRU_0583 767863 - 768261 + | hypothetical protein TERM 500 768458 - 768505 + G 70 -11.2 -3.58533 | overlap 768473 768494 CTTGTGCTGCTGAGC GGCCT-CGCCGCGCTGCTCGTC ACGGGC GTCGTGCCGC-CGGCGGAGGCC TTTGCCGGGTTCTCC SRU_0584 768344 - 770179 + | sodium/sulfate symporter family protein SRU_0585 770288 - 770650 + | hypothetical protein TERM 501 771112 - 771142 + F 78 -6.9 -4.63527 | ACCGACACACTCGAC CGGATG-GCCTCTAC GGA GT-GAGGCACCTCCG TTTTTCCAATCATCG SRU_0586 771168 - 771506 + | nucleotidyltransferase domain-containing protein SRU_0587 771454 - 771894 + | HEPN domain-containing protein TERM 502 771940 - 771952 + G 75 -6.9 -4.4009 | ACACCCTTCTTGTCA CCGGT GGG GCCGG TTTTATCGGCTCGGC TERM 503 772163 - 772208 + G 73 -14 -3.14211 | opp_overlap 772160 TGGGGCAATCCACCT CGCGGCGGAGTCGCACG-TGGA CCGC TCCATCG-GCGGCCCCGCCGCC TTCGTGCAGACGAAT rfbB 771918 - 772946 + | dTDP-glucose 4,6-dehydratase TERM 504 773583 - 773561 - g 89 -11.3 -4.18494 | gap 1 TAGGCTGAGCGAAAA GCTGCGCCGG GCGT CCGG-GCAGC CCTCGGGAGGGACCG rfbA 773169 - 774101 + | glucose-1-phosphate thymidylyltransferase rfbC 774130 - 774690 + | dTDP-4-dehydrorhamnose 3,5-epimerase rfbD 774703 - 775611 + | dTDP-4-dehydrorhamnose reductase TERM 505 775761 - 775782 + F 75 -2.9 -4.88918 | overlap 775769 CCTGTTCGTGTGGCG GTAGTCGGG TAGC CTCTACTGC TTTTCTTTCAACTCG SRU_0592 775936 - 778890 + | capsule polysaccharide export system periplasmic protein TERM 506 779052 - 779016 - T 78 -10 -4.07885 | overlap 779017 GAGCTGTCTTGAAAA GGGTGGACGCTCTCCC GCAGA GGGCGAACGTCCTCCT CGCATGCAAGAAGCT TERM 507 779051 - 779017 - T 75 -13.5 -3.04517 | overlap 779016 AGCTGTCTTGAAAAG GGTGGACGCTCTCCC GCAGA GGGCGAACGTCCTCC TCGCATGCAAGAAGC SRU_0593 779569 - 779468 - | hypothetical protein TERM 508 780002 - 779987 - H 71 -4.6 -4.42386 | overlap 779967 779989 CTTCGACGGAGAAAA TCCCGC CTCA GCGGCA CAAATAGGCATCACC TERM 509 782506 - 782516 + G 79 -3.2 -5.0538 | GGCGGACTGTTTGGG GTGG GTG CTAC TTTTTTCCGATCGGC SRU_0594 781369 - 782676 + | chain length determinant protein TERM 510 783698 - 783721 + G 100 -10.3 -5.30616 | gap 1, opp_overlap 783696 ATCGACGAAGAGAGC CCAGCTGCCG AGGCG CGGC-GCTGG TTTTTGTTTGCGTAC TERM 511 783861 - 783838 - g 77 -11 -3.84271 | gap 1, overlap 783841 CTACAAGATGAAGAA GAC-CGCCGAC ACG GTCGGCGTGCC CCTGATCCCCGAGGC SRU_0595 782822 - 784225 + | Phage integrase family protein SRU_0596 784284 - 785603 + | UDP-glucose dehydrogenase SRU_0597 785762 - 786730 + | UDP-glucuronate decarboxylase TERM 512 787040 - 787064 + G 95 -10.7 -4.46675 | TGGATTGGGAGCATT CGCGGTACTCG TTT TGAGTAACGCG TTTATTGTATTGACT TERM 513 787817 - 787801 - g 73 -3.6 -4.64861 | opp_overlap 787811 TGGGGCTAAAAGAAA CGACAG CATCC CCGCCG CAGGTATATTCAGAC SRU_0598 786780 - 788597 + | multidrug ABC transporter SRU_0599 788880 - 790355 + | NDP-sugar dehydrogenase, putative TERM 514 790370 - 790384 + G 71 -9.2 -3.89346 | AAACGCGTTCTTCTG CTCGGC GGT GCCGGG TTTATCGGGTACCAC SRU_0600 790352 - 791347 + | nucleoside-diphosphate-sugar epimerase SRU_0601 791369 - 792565 + | perosamine synthetase, putative SRU_0602 792693 - 793865 + | UDP-N-acetylglucosamine 2-epimerase SRU_0603 793870 - 794766 + | formyltransferase, putative SRU_0604 794763 - 795434 + | hypothetical protein spsE 795442 - 796512 + | sialic acid synthase TERM 515 796678 - 796666 - g 73 -4.1 -4.67943 | TTGGAAGAGACAAAA TCCTC ACC GAGAA GGATCCGTCCAAGGT pglB 796509 - 797138 + | pilin glycosylation protein PglB SRU_0607 797148 - 798200 + | putative mannose-1-phosphate guanyltransferase SRU_0608 798197 - 798907 + | CMP-N-acetlyneuraminic acid synthetase SRU_0609 800789 - 800022 - | IS5 family transposase TERM 516 800841 - 800854 + H 81 -3.7 -5.00616 | TCATTCCGAAAACGG GGCGG ACTC CCACC TTTTTTGGAAACGAA SRU_0610 800947 - 801414 + | hypothetical protein SRU_0611 801600 - 803027 + | hypothetical protein TERM 517 804545 - 804558 + F 77 -3.8 -4.8622 | TCTCGGTTTGCCCAC CTGG ACGCGA CCAG TTTTTCGTTCCACGG TERM 518 805157 - 805167 + F 73 -8.2 -4.08394 | opp_overlap 805157 805156 GAAGACGCGGAGAAG GCGC TGA GCGC TTTTGAGGAGGATCT TERM 519 805971 - 805957 - f 85 -2.8 -5.30616 | overlap 805958 TTAGGCAAATAAAAA CCCGAT TAG ATCAGA CGTATTTTTTTATTA SRU_0613 806019 - 806651 + | methyltransferase domain-containing protein TERM 520 807701 - 807668 - g 90 -4.1 -5.41746 | gap 1, overlap 807670 807673 AACTTTTTAAAAAAA TACAATTTT-AAGCCC GTA AGGCTTGAAAATTACA AGTGGGATAAGCAAG TERM 521 807768 - 807779 + G 83 -3 -5.14563 | CTCATGGAGCAGGAT TAGT TAAC ACTA TTTTTTGCTCGGACG TERM 522 807924 - 807913 - g 77 -3.6 -4.80396 | overlap 807922 TAAAAGACCGAAAAA GGGC AATG ACCC ACACTATGGCTGGGA SRU_0614 806744 - 807997 + | hypothetical protein SRU_0615 809074 - 809835 + | sulfotransferase domain-containing protein SRU_0616 809851 - 811047 + | glycosyl transferase, group 1 family protein TERM 523 811636 - 811623 - f 83 -5.3 -5.04385 | CATATTGGTAAAAAA GACTT ATAC AAGTC CTATGGGTACGCGGG SRU_0618 813785 - 814927 + | sugar epimerase BlmG TERM 524 815952 - 815935 - g 75 -9.1 -4.06055 | ACCCCGGAAATTAAA CAGCTGC CCGA GCAGCCG GGGGATGTGGAGCGC SRU_0619 815116 - 816099 + | UDP-glucuronate 5'-epimerase TERM 525 817189 - 817170 - g 70 -8.6 -3.9461 | overlap 817173 GGTCTGGAACAAGAA GAATGAGG TCTA CCCCATTC CGGAAGAGGAAAATC SRU_0620 816448 - 817815 + | putative colanic acid biosynthesis glycosyl transferase SRU_0621 818100 - 819926 + | glycosyltransferase TERM 526 820313 - 820346 + F 76 -6.8 -4.50358 | gap 1 GGGACATTTTCGATG GGACGGTTTGCGG AGGCGTGGC CCGT-AACCGTCC TTTTCGTATTTGCGT SRU_0622 820642 - 821394 + | putative glycosyltransferase SRU_0623 821458 - 822045 + | hypothetical protein TERM 527 823653 - 823663 + F 86 -8.2 -4.56597 | overlap 823648 AAAGCAAAGTGGAAC GCGG CTT CCGC TTTTTGAAGGACCCG TERM 528 823668 - 823697 + F 75 -3.5 -4.82901 | gap 1, overlap 823669 823672 GCGGCTTCCGCTTTT TGAAGGAC-CCGCA GTT TGTGGCGTCCTCCC TTTTTCTGGAGAGCG SRU_0625 824152 - 824262 + | hypothetical protein SRU_0626 826538 - 824475 - | phage integrase domain/SAM domain-containing protein TERM 529 825748 - 825730 - G 73 -5.9 -4.35518 | AACCGGAGAGTAAAA CGCAGGG TCGAG CCCCACG AAAGAACCGAACTAT TERM 530 826502 - 826491 - G 75 -4.4 -4.59853 | GGAATCGTCGAAAAA GACA ATAG TGTC AGGTGCTGTCCGATA TERM 531 827006 - 826954 - H 75 -3.3 -4.95758 | gap 1, opp_overlap 826965, overlap 826955 826958 826965 ACTACACGACAAAAA TGATCGAGAAGCGAGAAGCGCCTG AATGCA CCGGCGCAGCTCGTCTCTC-ATCC GGTACCAATTGGTTG TERM 532 827284 - 827247 - H 78 -2.8 -5.00884 | gap 2, overlap 827248 AGGCGCCGCAAAAAA CGCCAGTATCTCCCACCG CTTC CGGT-AGAGAT-CCAGCA TTGAGTCGGGATCGA TERM 533 827917 - 827865 - H 93 -7.7 -5.03145 | gap 2, overlap 827866 GAACTCGGCAAAAAA CCGCTGGAGACGCCGATAGGTCGAG TCGGT CTCGACCT-CAGGCTTCCCC-GCGT GGGCCAACTGGGCAA TERM 534 827916 - 827866 - H 73 -11.2 -3.61164 | gap 2, overlap 827865 AACTCGGCAAAAAAC CGCTGGAGACGCCGATAGGTCGAG TCGGT CTCGACCT-CAGGCTTCCCC-GCG TGGGCCAACTGGGCA SRU_0628 828427 - 828597 + | killer protein, putative higA 828581 - 828898 + | addiction module antidote protein SRU_0630 829698 - 829009 - | putative transcriptional regulator TERM 535 829466 - 829480 + g 77 -2.7 -4.85599 | overlap 829456 829467 ATTCGGCGGTCCTCA AGCCG CTGTT CGGCC TTTTTCTCAGCTCGG TERM 536 830584 - 830596 + G 82 -6.2 -4.77157 | opp_overlap 830571 830564 AACCGACGCCTGAAT CGGC TGAGC GCCG TTTTTGCTCCGTTGG TERM 537 831036 - 831016 - g 77 -3.9 -4.74706 | overlap 831017 GTCAAGAGGGAAAAA GGCCAGAAG ACC CTTCCAGCG GCAGATAAGCTGTTT SRU_0631 830326 - 831219 + | ISSru4, transposase TERM 538 831952 - 831939 - g 73 -3.8 -4.62904 | overlap 831941 AAATATCGTCAAAAA TGGC CACAGC GCCA GCGGCTCCCAGCAGT SRU_0632 831883 - 832161 + | IS1 family transposase insA SRU_0634 832683 - 833666 + | NAD dependent epimerase/dehydratase family protein SRU_0635 833792 - 834139 + | hypothetical protein SRU_0636 834519 - 834190 - | hypothetical protein SRU_0637 834685 - 835239 + | hypothetical protein SRU_0638 835397 - 835564 + | hypothetical protein SRU_0639 835917 - 836162 + | prevent-host-death family protein, putative SRU_0640 836430 - 836831 + | IS605 family transposase orfA SRU_0641 836835 - 837968 + | IS605 family transposase orfB SRU_0642 838610 - 838897 + | nucleotidyltransferase domain-containing protein SRU_0643 839713 - 840459 + | nucleotidyltransferase domain-containing protein TERM 539 841287 - 841275 - f 74 -5.5 -4.4648 | ATGGGCAGGAGAAAA GGTGC CAG ACACC GACCGTCCGTTGCGC SRU_0644 841709 - 841933 + | hypothetical protein TERM 540 843047 - 843090 + G 70 -12.9 -3.05935 | CTGCGCCTTGCTGAT GGGGGCGTCCGCCCGGCCC GCGCAG GGGCAGGGCGGGGGCCCAA TTCAATCGGAGGTGT TERM 541 843168 - 843224 + G 83 -12.8 -4.07568 | GACGCGAACCAGTAC GGGCGGCTAGGCCG-GAGCGGGATCCCC CTC GGGGCGCGC-CTCGCGGCCCGGCGGCCC TTTTCGGGCGCGAAG SRU_0645 843024 - 844457 + | hypothetical protein SRU_0646 844564 - 845070 + | hypothetical protein TERM 542 845283 - 845322 + F 70 -10.1 -3.58801 | gap 3, overlap 845302 CGCCATCCCGTCCGC GGC-CAGCGCCTCTGTCGGC GCG GCCGA-AG-GCCGCTGTGCC TTTGCCCGCTTCTAT TERM 543 845302 - 845331 + F 73 -11.4 -3.59698 | overlap 845283 AGCGCCTCTGTCGGC GCGGCCGAAGGC CGCTGT GCCTTTGCCCGC TTCTATCTGGGCTAC TERM 544 845413 - 845446 + F 76 -8.9 -4.18401 | gap 2 CCTCTTGTTGTTGCA CCCCGCCGG--TCGA TCGCCT TCGGCCCCGGCGGGG TTTTCGCATGTGTGG SRU_0647 845454 - 845933 + | putative chorismate mutase TERM 545 846091 - 846076 - gf 71 -8.2 -3.84406 | overlap 846073 GCCGGAGTATAACAA GCCGGA TGCG CCCGGC CTGCACATGAACTTC SRU_0648 845906 - 846460 + | hypothetical protein SRU_0649 846457 - 846711 + | hypothetical protein TERM 546 846889 - 846856 - T 100 -22.5 -3.04144 | overlap 846861 GGTGCACCCTCAACA CGAAACGCCCGCGCC GGAG GGCACGGGCGTTCCG AGGGACACCGGAATG TERM 547 846884 - 846861 - T 100 -17.4 -3.92592 | overlap 846856 ACCCTCAACACGAAA CGCCCGCGCC GGAG GGCACGGGCG TTCCGAGGGACACCG SRU_0650 847882 - 846923 - | TPR repeat-containing protein graD 848219 - 849394 + | glucose-1-phosphate thymidylyltransferase TERM 548 849580 - 849604 + F 78 -14.2 -3.05384 | CGGCGATGGCCTGCC GGGCCGGCGG GGCAA CGGCCGGCCC TTCCGTGAACGGACA SRU_0652 849703 - 852162 + | MutS2 family protein SRU_0653 852333 - 853298 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain-containing protein TERM 549 853804 - 853815 + G 74 -2.2 -4.72272 | gap 1, overlap 853767 GGGGACGTGATGGAG GC-CG GAA CGAGC TTTTTCGTCCGGGGC SRU_0654 853483 - 853947 + | hypothetical protein TERM 550 855041 - 855073 + G 86 -18.3 -3.01791 | TCGACGTGCCGGCCC GGTGGGCGGCGCCCG GCT CGGGCATCGCCCCCC TCTTCAACCCGACGT TERM 551 857301 - 857352 + G 89 -16.8 -3.53224 | gap 4 GGCCAATGCCCTGGC CCGGCCCATCGCCCA--G-CTCCGGG AGGG CCTGGAGGCCGTGGGCGA-GGGCCGG TTTACGCGCACCCTC TERM 552 857909 - 857874 - g 78 -6 -4.58283 | gap 1, overlap 857876 CAACCTCCTCAAAAA CG-CCCTGCAGGCCCTC CCC GACGACCGGGAGGGACG GGTCCGGGTCACCGC SRU_0655 854074 - 858180 + | sensory transduction histidine kinase SRU_0656 859455 - 858199 - | caax prenyl protease 1 TERM 553 859024 - 858967 - G 73 -9.7 -3.96216 | gap 1, opp_overlap 858972, overlap 858964 858970 858972 GGTGGACTGAAAGAA CCAGAGGATCGCGGCCAGGAGCGGCCCC CCA AGGGCCACCCCGAGC-GCGACGCTCTTC AGCAGGTCCAGCGCG TERM 554 859021 - 858970 - G 77 -15.8 -3.03829 | gap 1, opp_overlap 858972, overlap 858964 858967 858972 GGACTGAAAGAACCA GAGGATCGCGGCCAGGAGCGGCCCC CCA AGGGCCACCCCGAGC-GCGACGCTC TTCAGCAGGTCCAGC SRU_0657 859505 - 859831 + | hypothetical protein TERM 555 860352 - 860335 - T 76 -5.5 -4.57073 | opp_overlap 860318 860337 860340, overlap 860338 GATTCTTCTGAAAAA GAATCGG ATTT CCGAGTC CCTTTACCAGTCTCC TERM 556 860349 - 860338 - T 74 -5.8 -4.40561 | opp_overlap 860318 860337 860340, overlap 860335 TCTTCTGAAAAAGAA TCGG ATTT CCGA GTCCCTTTACCAGTC TERM 557 860601 - 860579 - T 81 -7 -4.7629 | GGAGGAATGGAAAAA GAGCCGAC GCCGGAA GTCAGCTC GACTGAAAGATCACA SRU_0658 861069 - 860716 - | helix-turn-helix domain-containing protein treZ 862838 - 861066 - | malto-oligosyltrehalose trehalohydrolase TERM 558 861744 - 861686 - G 72 -15.1 -2.77523 | gap 2, opp_overlap 861692, overlap 861681 861683 TCTGGATGAAGACGA CGCACTCC-GTGCGGGCCACCGGGC-CCG GAT CGGTGCCCCGCGGCTCGCCCAGGTGTTCG GAGTGCTCGCCGCGG TERM 559 861692 - 861738 + g 72 -14.3 -3.04792 | gap 2, opp_overlap 861681 861683 861686 TGAAGACGACGCACT CC-GTGCGGGCCACCGGGC-CCG GAT CGGTGCCCCGCGGCTCGCCCAGG TGTTCGGAGTGCTCG malQ 864549 - 863029 - | 4-alpha-glucanotransferase SRU_0661 866325 - 864670 - | membrane flanked domain-containing protein TERM 560 865966 - 865993 + g 71 -2.7 -4.66833 | gap 1, overlap 865980 865981 TTCGATCTGGATGTT CTGGACGCGTTC GATGG GGATGC-TCCGG TTTTTCCGGTTGAAC SRU_0662 866930 - 866382 - | putative integral membrane protein TERM 561 866829 - 866811 - G 73 -6.6 -4.33907 | overlap 866812 866813 CAGAAACATCGAAAA GGCGGCCA TCT TGATCGCC CAGACGGCCCGGATT aroK 867639 - 867025 - | shikimate kinase TERM 562 868338 - 868322 - g 70 -11.5 -3.4072 | overlap 868323 GATTGGGCACGAGAA GCGCGCC GCC GACGCGC TCCCGGCCGTGCTGG truA 867693 - 868490 + | tRNA pseudouridine synthase A TERM 563 868528 - 868500 - f 78 -14.5 -3.03124 | opp_overlap 868502 GCGTAGCCGGCAAGA GGCGGCGCCGG GCGGGTG CCGGCGGCGCC GTTGATGCGAGAGCG TERM 564 868502 - 868529 + F 80 -14.8 -3.14132 | gap 1, opp_overlap 868500 GTAGCCGGCAAGAGG CGGCGCCGGGCGG GTG CCGGC-GGCGCCG TTGATGCGAGAGCGA SRU_0665 868612 - 868839 + | hypothetical protein SRU_0666 868908 - 870215 + | amidinotransferase SRU_0667 870386 - 871369 + | pyridine nucleotide-disulphide oxidoreductase class-II TERM 565 871400 - 871426 + F 78 -6.5 -4.54727 | gap 1, overlap 871401 GCATCCCGAGCCATC GCTGGGGCTTCG GATC CGA-GCCCCGGG TTTTCGTTTCCGGAG SRU_0668 871725 - 872309 + | hypothetical protein SRU_0669 873973 - 872435 - | D-3-phosphoglycerate dehydrogenase TERM 566 873023 - 872993 - G 72 -8.2 -4.03234 | opp_overlap 872993 872993 872991 872995, overlap 872994 873014 CGGGTCGTACAGAAA GCCGCGGGCC GCGTTGATGAA GGCCCGCGGG CTGTTGTCCGGCCGG TERM 567 873938 - 873907 - G 100 -19.4 -4.32177 | TGAGGGGACAACAAA GAAGCCGCCGGGCC GGGG GGCGCGGCGGCTCC TCAGTCGTCGCGACG sucD 874861 - 873995 - | succinyl-CoA synthetase, alpha subunit TERM 568 874452 - 874438 - G 72 -4.3 -4.56775 | overlap 874424 874439 874442 AGCCGGGCTCAAAAA TCATG GCCGG CATGA TGCCCACCTTGGCCG SRU_0671 876712 - 875168 - | amidase, putative TERM 569 876667 - 876636 - G 100 -10.2 -5.00884 | gap 1 ATGCGCTCCAAAAAA GAAGAGACCAG-GGC TTC GCAGCTGGTCTCTCC GGCGTCGAGGGCGCG SRU_0672 877210 - 876806 - | putative sec-independent protein transporter add 877367 - 878557 + | adenosine deaminase TERM 570 878745 - 878723 - f 88 -6.9 -5.14477 | opp_overlap 878724, overlap 878724 TAGACATGGAAAAAA GGGACGCAG TGAGG CCGCGTCCT CCGTTCTCCGCGTCC TERM 571 878744 - 878724 - f 70 -10.4 -3.67602 | opp_overlap 878724, overlap 878723 AGACATGGAAAAAAG GGACGCAG TGAGG CCGCGTCC TCCGTTCTCCGCGTC aroA 878852 - 880144 + | 3-phosphoshikimate 1-carboxyvinyltransferase SRU_0675 881084 - 880320 - | hypothetical protein TERM 572 881221 - 881207 - R 74 -12.8 -3.28712 | CGGTCCCCCCGACAA GGCCGG AAG CCGGCC CGCGCTACGCGTCCT SRU_0676 882239 - 881226 - | universal stress protein SRU_0677 882865 - 882212 - | response regulator receiver domain-containing protein TERM 573 882909 - 882899 - R 77 -2.4 -5.093 | GGCAAAAGAAGAAAA CGTG CAT CCCG GCTCCGATCCAGATG TERM 574 882988 - 883010 + r 74 -14.8 -2.63301 | opp_overlap 882974 AGTACCGAGGCGGGC CGGGCGTCTG TAC CGGGCGCCCG TCGTCTCCCCCTGTG SRU_0678 884329 - 883061 - | sensor protein fixL TERM 575 883327 - 883343 + g 73 -13.7 -3.14564 | TGATGTTGTCGGCCT CGCCGTG GCG CACGGCG TTGCTCACGGCCTCC TERM 576 885240 - 885265 + G 76 -14.7 -3.14132 | gap 1 CGACGCTGTTGGAGC GGCGCGGGCGCC GCC GGC-TCCGCGCC TTCCTGCAGGAAGGC SRU_0679 885029 - 885520 + | universal stress protein TERM 577 885953 - 885991 + G 74 -12.3 -3.53444 | gap 1 GTGCGGGCAGAGGGG GCGGACGAGGCCCGGTCC GACT GGAGCGGGCCG-GCCCGC TTTGCGGCCCCGTCC TERM 578 886415 - 886375 - g 83 -8.8 -4.62069 | gap 1 GCCCGAGGGCAAAAA CCCGCGGGCGGCGGCCCGG ATCG CGGGGCCGGC-CACACAGG CACGAACGAGCACGA SRU_0680 885566 - 886507 + | putative DNA-binding protein TERM 579 886493 - 886519 + F 74 -12.2 -3.43676 | overlap 886494 ACCATTGCACTCATC ATCCTCGCCGGG TAG TCCGGCGAGGGA TTCTCGATTCGTCCC TERM 580 886494 - 886518 + F 77 -15.7 -2.65884 | overlap 886493 CCATTGCACTCATCA TCCTCGCCGGG TAG TCCGGCGAGGG ATTCTCGATTCGTCC SRU_0681 886554 - 887504 + | L-lactate dehydrogenase ispG 888941 - 887568 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 581 887856 - 887813 - GT 76 -9.2 -4.03234 | opp_overlap 887834 CCCGTCCCAGAGAAA CGCCGAGGTCGGCCCCTTCG GCCT CGCCGGGGCCGTTGACGGCG CAGCCCATGAGGGCC TERM 582 887834 - 887880 + gT 77 -10.6 -3.7941 | opp_overlap 887813, overlap 887877 GGTCGGCCCCTTCGG CCTCGCCGGGGCCGTTGACGGC GCA GCCCATGAGGGCCACGTCGAGG TTCTTGTCGAAGCTC SRU_0683 889746 - 888898 - | S54 family peptidase putative TERM 583 889012 - 889027 + gr 72 -11.8 -3.25823 | GGTATGCCCGGAGGA CGGGGC CGAG GCCCCG TTCGTGTCGACGGGG TERM 584 889357 - 889344 - GR 73 -3.8 -4.64676 | opp_overlap 889344 CGACCCCGAAGAAAA GCAG TCGGAT CTGC TTGTACGGGTACAGG SRU_0684 890883 - 890155 - | cytoplasmic membrane protein TERM 585 890503 - 890521 + g 70 -6.6 -4.2349 | opp_overlap 890503 890504, overlap 890504 GTAGAAAAACACGAA TCGCTGCG AGC CCCAGCGG TTTTCGATCTGAACC TERM 586 890870 - 890855 - G 88 -10.4 -4.38712 | CGGAGGGGGAGAAAA CCGCAC GGCA GTGCGG ATCCAGTTAACAATC SRU_0685 890971 - 891726 + | serine/threonine protein phosphatase family protein TERM 587 891902 - 891918 + G 73 -9.3 -3.90744 | opp_overlap 891880 891885 GACACGGGCGTCCCA CCACCGG CTT CCGGGGG TTCTTTCACCGCCGG TERM 588 893514 - 893493 - g 71 -2.9 -4.66833 | gap 1, overlap 893495 GGCCAACTCCAAAAA CACGATCACG GCC CG-GCTCGCG CTCGACCTGAACCCG SRU_0686 891778 - 894153 + | transglycosylase domain-containing protein TERM 589 894370 - 894396 + G 72 -5.6 -4.31164 | GAGGCCGTGGTCCAG CGTGCCCTCGAC GCC GACGTGGACGCG TTTCTGTTCTGTGGG SRU_0687 894181 - 895542 + | nuclease SbcCD SRU_0688 895643 - 896308 + | hypothetical protein ispE 897417 - 896446 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 590 896916 - 896893 - GT 88 -3.9 -5.24531 | opp_overlap 896900, overlap 896894 896895 ATCCTGGAGAAAAAA CGGCACG-TCG GCCC CGATCGTGC-G CCCGATTTCCTGGAG thrB 898336 - 897377 - | homoserine kinase TERM 591 897669 - 897653 - GR 74 -9.3 -3.96148 | overlap 897625 GGGCTCCACGATAAA GTCGCGC AGG GCGCGCC CGATGAGCGCGAGGT SRU_0691 900953 - 898488 - | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 592 899570 - 899559 - G 72 -7.2 -4.2349 | overlap 899560 CTTCGAGAGGTAAAA GCCC GCGT GGGC GGCCCGTAGGGCGCG SRU_0692 901919 - 901062 - | purine nucleoside phosphorylase I, inosine and guanosine-specific SRU_0693 903080 - 901974 - | hypothetical protein TERM 593 902043 - 902053 + g 74 -2.4 -4.79451 | overlap 902030 902042 GGCGTCCTGGTCGTC CCCG GAG CGGC TTTTCTGTTTCGACT TERM 594 902928 - 902940 + g 70 -2.6 -4.61231 | overlap 902918 ACGGGCGTTCTGGAG CGTC TCCTC GGCG TTTTTGCGGGTCTGG SRU_0694 904062 - 903361 - | hypothetical protein SRU_0695 904467 - 904237 - | hypothetical protein TERM 595 904311 - 904269 - G 72 -14.8 -2.7314 | gap 1, overlap 904266 904261 CGTCAAACGACACGA CGCGGCCGCCCTGCGCGAC GATGTG GACGCGCAGGG-GGCGGCA ACAGACGCCACAGTC SRU_0696 907055 - 904509 - | permease TERM 596 904757 - 904780 + g 72 -8.8 -4.07568 | gap 1, overlap 904778 TCATGATGGTCTGCA CGGTGCGGCGC GAG GCGCC-CAGCG TTTTCAGAAGGACGC TERM 597 905750 - 905703 - G 75 -4.6 -4.57569 | gap 1, overlap 905705 GGAGGTGGGGAAAAA GCGGCGCACGCCCGCCATGATGC CCC GAGCCACGA-GGGCGAGCACCCC AAACACAGCCCCTAC SRU_0697 907714 - 907202 - | GAF domain-containing protein SRU_0698 908066 - 907782 - | hypothetical protein TERM 598 908305 - 908258 - R 71 -9.6 -3.73756 | gap 1, overlap 908256 908259 TACGTCACGAAAATA CCGCAC-GGGGCCCACCGCTGCC GAT GGTCGCGACGGGCCCGAGAGCGA ACATGGGGGAGACGC SRU_0699 908756 - 908547 - | hypothetical protein TERM 599 908994 - 908959 - R 100 -15.3 -4.18506 | opp_overlap 908964, overlap 908963 GCACTCCCAAAATAA GGAACGGCCCCCGGC GTCTGT GCCGGGGGCCGCACG GCGGACGACGAGCTG TERM 600 908990 - 908963 - R 100 -21.3 -3.68798 | opp_overlap 908964, overlap 908959 TCCCAAAATAAGGAA CGGCCCCCGGC GTCTGT GCCGGGGGCCG CACGGCGGACGACGA TERM 601 908998 - 909028 + r 84 -3.9 -5.14563 | gap 2, overlap 909000 909019 GGGGGCCGCACGGCG GACGACGAGCTGGCG AGT CGAC-GCTCG-CGCC TTTTTTCGTGAAAGC SRU_0700 910060 - 909053 - | ABC transporter, periplasmic binding component TERM 602 910865 - 910851 - g 74 -10 -3.76224 | overlap 910854 CCTCCATCCACGAAA TGACCC CTC GGGTCA AGCAGTTCATCCTTG SRU_0701 910850 - 911512 + | putative phenol hydroxylase TERM 603 912709 - 912752 + G 79 -8.7 -4.36914 | gap 1, opp_overlap 912687 912690 GCAGCCCCCCCGGCA GCTCGTCGTCGGGCCCGCCG GGGAG CGGCGGCTTCGG-GTCGGGC TTTTCTGGGGGCGGA SRU_0702 911811 - 913088 + | hypothetical protein trkA 913164 - 913895 + | TRK potassium uptake system protein SRU_0704 914312 - 913998 - | hypothetical protein SRU_0705 915128 - 914604 - | hypothetical protein SRU_0706 915563 - 915162 - | hypothetical protein SRU_0707 916809 - 915610 - | hypothetical protein TERM 604 916563 - 916580 + g 77 -5.5 -4.63218 | opp_overlap 916565, overlap 916565 TCATTCGGCACGAAG GAGGCGA AGGT TCGCCTA TTTTATTAAAAGAAG TERM 605 916722 - 916697 - G 71 -12.7 -3.28712 | gap 1, opp_overlap 916701, overlap 916704 GGGCGGCGTCTAGAA CAGACGAG-CAG ACC CTGTCTCGTCTG CTGGGGGGACGGTGT SRU_0708 917226 - 916834 - | hypothetical protein SRU_0709 918881 - 920032 + | IMP dehydrogenase/GMP reductase SRU_0710 921140 - 920073 - | alcohol dehydrogenase, zinc-containing TERM 606 921193 - 921166 - R 71 -4.7 -4.41548 | overlap 921168 GGACACGGCAGAAAA CGGGCGATCCC CTATAC GAGAGCGCCGG AGCCGTGATGCAGGC SRU_0711 921780 - 921307 - | hypothetical protein TERM 607 921464 - 921432 - G 100 -10.6 -4.86731 | gap 1, opp_overlap 921437, overlap 921433 921434 921457 921458 CGGTGGGAAAGAAAA GCGGAGCGGTCTCGG CCTG CCGAAACCGCT-CGT TGAGGGCCTCCATCT TERM 608 921463 - 921433 - G 78 -14.1 -3.51557 | gap 1, opp_overlap 921437, overlap 921432 921434 921457 921458 GGTGGGAAAGAAAAG CGGAGCGGTCTCGG CCTG CCGAAACCGCT-CG TTGAGGGCCTCCATC TERM 609 921871 - 921859 - H 71 -4.8 -4.4767 | overlap 921861 GCAGGGACGACAAAA TGCG CCCCT CGCA GTGCCGACACAAAGG SRU_0712 922252 - 922530 + | ISSru3, transposase insA SRU_0713 922494 - 922970 + | ISSru3, transposase insB SRU_0714 923101 - 923817 + | ribosomal protein S10p/S20e, putative SRU_0715 923873 - 924583 + | exonuclease, putative ssb 924748 - 925260 + | single-strand binding protein TERM 610 926607 - 926592 - g 70 -11.8 -3.40403 | opp_overlap 926591 926589 GTCCCCGGACCAGAA CGGCGG GGCC CCGCCG CTGCTTGCCTGGGAG SRU_0717 925441 - 926994 + | phenylalanine and histidine ammonia-lyase TERM 611 928262 - 928282 + G 73 -13.3 -3.28924 | CGCCGCCGCCCGGTC CAGGTGCTG CTC CGGCACCTG TTCTGGGGCACCCTC TERM 612 928950 - 928993 + G 91 -13 -4.18494 | gap 1, opp_overlap 928952 928954 CCGAGGACTCCGACA CAGACGACGCCCCGGCCGCCC GCC GGGAGGA-GGAGCGTCGCCTG TTTTACGTCGCCCTC TERM 613 928991 - 928952 - g 71 -14.2 -2.88861 | gap 1, opp_overlap 928950, overlap 928954 GAGGACTCCGACACA GACGACGCCCCGGCCGCCC GCC GGGAGGA-GGAGCGTCGCC TGTTTTACGTCGCCC TERM 614 928989 - 928954 - g 70 -13.2 -2.99471 | gap 1, opp_overlap 928950, overlap 928952 GGACTCCGACACAGA CGACGCCCCGGCCGCCC GCC GGGAGGA-GGAGCGTCG CCTGTTTTACGTCGC SRU_0718 927059 - 929626 + | ATP-dependent DNA helicase SRU_0719 930305 - 929787 - | hypothetical protein SRU_0720 931841 - 931407 - | hypothetical protein SRU_0721 933105 - 931852 - | oxidoreductase, FAD-binding TERM 615 933675 - 933719 + G 75 -14.2 -3.28712 | gap 1 GCGTCGGGGGACCTC GCGCCGCTGGCCCACCTGGCG CTGC CGCT-GCTGGGCGAGGGGCGC TTCTGGACGGAGGAC hutH 933270 - 934763 + | histidine ammonia-lyase SRU_0723 936284 - 934902 - | hypothetical protein TERM 616 935426 - 935409 - G 71 -9.1 -3.86015 | gap 1, opp_overlap 935412 935418 GACCTCGCCCAGAAA GC-CCGCG TCG CGCGGCGC GCTTTCTTCAGTGAT TERM 617 935418 - 935428 + g 76 -8.2 -4.21974 | opp_overlap 935409, overlap 935412 CAGAAAGCCCGCGTC GCGC GGC GCGC TTTCTTCAGTGATGC TERM 618 936358 - 936382 + H 74 -9.1 -3.91897 | GGTGGGGGCGGTTTC GGGCCGCCGCG AGA CGGTGCGGCTC TTTCTCGCTCCGCGC SRU_0724 936579 - 937691 + | putative HlyD-like secretion protein SRU_0725 937760 - 940984 + | multidrug resistance protein, putative TERM 619 941290 - 941249 - g 77 -13.7 -3.40403 | gap 1 GGCGCTCGACGACAA TCGGC-AGGCCCGCATCGCG CGC CGCGAGACGGACATCGCCGA GAACGACGTCTCGCT SRU_0726 941052 - 942455 + | putative outer membrane protein TolC hisG 943344 - 942493 - | ATP phosphoribosyltransferase TERM 620 943297 - 943317 + g 83 -12.5 -4.15044 | GTCGGCCAGGGTCAC GGCGCCGTC TGC GAGGGCGCC TTTGTTGGGGAGAGC hisE 943732 - 943469 - | phosphoribosyl-ATP pyrophosphatase SRU_0729 944011 - 944610 + | bioY family protein SRU_0730 944854 - 944660 - | prevent-host-death family protein SRU_0731 945540 - 945064 - | ISSru3, transposase insB SRU_0732 945782 - 945504 - | ISSru3, transposase insA TERM 621 946672 - 946682 + G 70 -2.4 -4.62069 | overlap 946662 CCTTAGCCGCGGAGG GAGC GTG GCGC TTTTTGCGATGCAGG SRU_0733 946412 - 946945 + | hypothetical protein TERM 622 947513 - 947467 - g 73 -14.3 -3.12847 | gap 1 AACCCGTAGACTCAA CCGCGGTCGACCCGCCCCCGTC CGAC GAGGAGGGCGGGGCG-CCGTAG CGCCGGAACCGGGGC SRU_0734 947067 - 947513 + | hypothetical protein xseB 947887 - 947618 - | exodeoxyribonuclease VII, small subunit SRU_0736 947999 - 948772 + | short chain dehydrogenase/reductase family oxidoreductase SRU_0737 949921 - 948782 - | hypothetical protein TERM 623 949476 - 949460 - G 79 -3.5 -4.87893 | overlap 949462 AAGGTCAATGAAAAA GACCGGC CGG GCCGGGG TGCTGGGGTACGTGA TERM 624 949474 - 949462 - G 78 -10.5 -4.05402 | overlap 949460 GGTCAATGAAAAAGA CCGGC CGG GCCGG GGTGCTGGGGTACGT xseA 951344 - 950148 - | exodeoxyribonuclease VII, large subunit SRU_0739 951619 - 952158 + | low molecular weight protein-tyrosine-phosphatase TERM 625 952327 - 952357 + G 89 -5.3 -5.24129 | gap 1, opp_overlap 952327 952344 952345, overlap 952330 CGGATGCATTGCAAA CGCGTGCCGCCTCG AAAC CGACGCCGCGC-CG TTTTTTCTGAAGCAC SRU_0740 952175 - 953107 + | phosphotransferase family protein, putative SRU_0741 953748 - 953128 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein brp 954645 - 953761 - | bacteriorhodopsin related protein SRU_0743 956324 - 954849 - | phytoene dehydrogenase and related proteins TERM 626 954980 - 954953 - G 72 -14.8 -2.78384 | gap 1, opp_overlap 954967 954968 CGCCGGTGTAGTAGA GCCC-CGGGGCCG TGT CGGCCCGGTGGGC GGGGCGCAGCGGGCC TERM 627 954967 - 954997 + g 81 -14.6 -3.53563 | opp_overlap 954953, overlap 954968 AGCCCCGGGGCCGTG TCGGCCCGGTGGGC GGG GCGCAGCGGGCCGG TTTGCCACAGCGTGT TERM 628 954968 - 954996 + g 75 -15.9 -2.71924 | opp_overlap 954953, overlap 954967 GCCCCGGGGCCGTGT CGGCCCGGTGGGC GGG GCGCAGCGGGCCG GTTTGCCACAGCGTG TERM 629 955220 - 955209 - G 72 -5.8 -4.35483 | overlap 955211 GGGCACCAGAATAAA CACC GAGT GGTG CCCATCGGGGGCGTA ftsQ 957224 - 956421 - | hypothetical protein hemN 957306 - 958688 + | coproporphyrinogen III oxidase SRU_0747 958737 - 960230 + | hypothetical protein SRU_0748 960190 - 960837 + | rrf2 family protein (putative transcriptional regulator) SRU_0749 961615 - 960869 - | response regulator TERM 630 961043 - 961025 - G 74 -10.2 -3.87994 | ATGGACCCGCATAAA CCGCGTCG GGG CGAGGCGG TCCTCCAGCGCGCCG SRU_0750 962797 - 961658 - | histidine kinase family protein TERM 631 962672 - 962657 - G 90 -6.1 -5.24129 | CTGGGCGATAAAAAA CGCGT AGAGAA ACGCG TAGAGCGTCCAGCCC SRU_0751 963671 - 962841 - | putative integral membrane protein SRU_0752 964664 - 963696 - | ABC transporter, ATP-binding protein SRU_0753 965570 - 964704 - | TPR repeat-containing protein SRU_0754 967838 - 965628 - | outer membrane receptor protein, putative TERM 632 966284 - 966312 + g 93 -10.2 -4.57569 | overlap 966287 GCAGGCCGAGCACGA CGTGCTGGGCGC GTTGG GCGCCGAGCGTG TTTTTGCCGACGTGC TERM 633 967278 - 967257 - G 73 -13.7 -3.11634 | GCGCACAGCACCGAA CGAGCCCCC CGCC GGGGACTCG TAGCGGTACGGATGG TERM 634 968036 - 968009 - R 100 -14.8 -4.91852 | GCCATCAAAAAGAAA GGCCGACCCGCC AACT GGCGAGCCGACC CGAAACAAGTTGAAT SRU_0755 968250 - 968062 - | hypothetical protein TERM 635 968464 - 968476 + r 91 -9.1 -4.45117 | GGACGGTTGTACGTT TCGGC GCC GCCGA TTTATTTAGACTCTG TERM 636 968627 - 968641 + r 82 -11.4 -4.08767 | TGCGGGGGAAAGGGT GCACCC TGG GGGTGC TTTTCGAGACCTCAA bioB 969985 - 968906 - | biotin synthase SRU_0757 971118 - 969982 - | hypothetical protein TERM 637 971154 - 971138 - H 81 -4.3 -5.03145 | opp_overlap 971140 971142 971144, overlap 971140 971141 CAATCGCGCAAAAAA TACGCCG GAT CGGCATC CTGTTCTCCTTCGGT SRU_0758 971226 - 971693 + | hypothetical protein SRU_0759 971923 - 974196 + | sensory transduction histidine kinase TERM 638 974474 - 974518 + G 78 -9.9 -4.07885 | gap 1 GGATCCGCTGACCGA GTGCTGGGGGGCAGTGCGTC CTACCT GACGCTC-GCCGCCCGCCAC TTTTGCGAAGACGTC SRU_0760 974405 - 975343 + | carbohydrate kinase folB 975403 - 975831 + | dihydroneopterin aldolase SRU_0762 976693 - 975839 - | glutamine amidotransferase maf 977521 - 976805 - | septum formation protein Maf TERM 639 977679 - 977653 - g 86 -9.4 -4.62069 | opp_overlap 977671 GGGGCACCGGAAAAA CCACCACGAC CATCCAT GTCGCGGCGG CGCTGGGATTGTCGG SRU_0764 977607 - 978464 + | Soj family protein SRU_0765 978870 - 978544 - | hypothetical protein SRU_0766 980380 - 978923 - | sodium- and chloride-dependent transporter TERM 640 979980 - 979970 - G 72 -8.2 -4.0896 | overlap 979971 AAAGCCCTCCCAAAA CGCC TCC GGCG CGAAGCCCGCCGACG TERM 641 980339 - 980327 - G 74 -2.6 -4.72986 | CATCGCCATCAAAAA CCCG AAGCG CGAG CCCCACTGGGCGCGC SRU_0767 980578 - 981768 + | N-acyl-L-amino acid amidohydrolase, putative SRU_0768 982453 - 981797 - | esterase/lipase, putative SRU_0769 983474 - 982500 - | lysine decarboxylase-like protein SRU_0770 984956 - 983772 - | cupin superfamily protein SRU_0771 985309 - 985121 - | hypothetical protein SRU_0772 985539 - 985351 - | hypothetical protein SRU_0773 985674 - 986375 + | hypothetical protein SRU_0774 986422 - 986748 + | hypothetical protein TERM 642 988027 - 988007 - g 71 -12.5 -3.27475 | overlap 988005 CGTTCGACGACAAGA GCCCGTTCG TCA CGAGCGGGC TGCGCCTGGGAACGC glyA 986911 - 988209 + | serine hydroxymethyltransferase SRU_0776 988413 - 988916 + | orotate phosphoribosyltransferase, putative TERM 643 989191 - 989209 + G 90 -5.9 -5.21709 | TCGACCAGGTCCTGA TCGGGCC CACGC GGCCGGA TTTTTTCATGTACGA TERM 644 989475 - 989486 + G 70 -2.2 -4.57569 | CTCATCCTGACCCCA CTGG CCCT TCAG TTTTTCGCCCAGTAC tatC 989070 - 989834 + | Sec-independent protein translocase TatC prc 989874 - 991529 + | carboxy-terminal peptidase SRU_0778 991585 - 991493 - | hypothetical protein SRU_0780 991910 - 992521 + | hypothetical protein SRU_0781 992609 - 993046 + | MutT/nudix family protein TERM 645 993287 - 993313 + T 100 -15.8 -4.9725 | CCTTGGTGCCCTGAG CCCGCCTCCCGT GTC GCTGGAGGCGGG TTTTTGTGTGGGCGT SRU_0783 994191 - 993415 - | universal stress protein, putative SRU_0784 997616 - 994617 - | hypothetical protein TERM 646 997130 - 997150 + g 88 -14.7 -3.91144 | CCTGTTGCCCCCCGC CCCGCTCGA ACG TCGGGCGGG TTTGTGCGGTGTCGG SRU_0785 998577 - 997594 - | xylose repressor TERM 647 998496 - 998536 + g 72 -13.1 -3.14344 | GACGTTGGGTTTGTT CGAGCAGGCCGTCCTCGCG GGC CACGAGGGCGGCCTTCAGG TTCGTCCCGCCAATG SRU_0786 998958 - 998662 - | septum formation initiator superfamily protein eno 1000263 - 998974 - | phosphopyruvate hydratase TERM 648 999024 - 999052 + g 77 -13.1 -3.50853 | AGTGGGCCGTCGCCC CCAGCTGCTCCTC GAT GCGGAGCAACTGG TTGTACTTGGCCACC TERM 649 1000430 - 1000402 - R 74 -4.6 -4.57341 | gap 2, opp_overlap 1000423, overlap 1000389 1000405 1000406 AAGGGCGTTCAAAAA TGATCGGCCGTGCT CGC AG-ACGGCCGG-CA CACGGATGAGGCCCG TERM 650 1000498 - 1000469 - R 100 -15 -4.48987 | gap 1, opp_overlap 1000468 CCGTGACAACGAAAA GGGCCGACG-GCC TCAAC GGCACGCCGGCCC CTCTGCTCTACCGAA SRU_0788 1001747 - 1000524 - | TPR repeat-containing protein TERM 651 1001654 - 1001664 + g 72 -6.8 -4.16943 | overlap 1001640 CGTCCCCGTCGGGGG TGCC GGG GGCA TTTTCGAGTATCCAG SRU_0789 1003185 - 1002013 - | hypothetical protein SRU_0790 1004796 - 1003402 - | hypothetical protein SRU_0791 1005780 - 1004989 - | glycogen synthase SRU_0792 1006660 - 1007424 + | lipoprotein-releasing system ATP-binding protein lolD TERM 652 1007437 - 1007459 + F 73 -6.8 -4.36903 | opp_overlap 1007415, overlap 1007438 TAGCGCCTGAGGTGT CCGGTGGGGG CGT CCCCCCTCGA TTTCTGTTTCCTCAA TERM 653 1007704 - 1007670 - g 79 -2.1 -5.1101 | gap 2, overlap 1007671 CGAGCAGGTAAAAAA CGGGC-CG-TACACCAG CAT CTGGTTCAACGCGCCCC GGCTGCCGTGGGAGA SRU_0794 1007494 - 1007868 + | hypothetical protein SRU_0793 1008725 - 1007865 - | hypothetical protein TERM 654 1008017 - 1007997 - G 89 -16.9 -3.54459 | opp_overlap 1007995 TGAAGGGGGGCCAAA GGCCTCGTC AAC GACGAGGCC GGTACTATCCAGGTC SRU_0795 1010060 - 1008825 - | hypothetical protein lipA 1011138 - 1010140 - | lipoyl synthase TERM 655 1011332 - 1011322 - R 72 -2.4 -4.7254 | AGGCTTTACCAAAAA GGCG GAA CGAC GGAGGAGGCCGATCG SRU_0797 1011962 - 1011372 - | acetyltransferase TERM 656 1013125 - 1013088 - g 75 -14.2 -3.34398 | gap 1, overlap 1013069 1013086 CGCCTCGCGGAAATA CGCACCGTG-GGCGCTG CCGAC CAGCACCTCACCGTGCG GGCCATCGGGGAGGT SRU_0798 1012179 - 1013894 + | amidohydrolase SRU_0799 1013977 - 1015365 + | L-lysine aminotransferase recN 1017154 - 1015436 - | DNA repair protein RecN secA 1020776 - 1017294 - | preprotein translocase subunit SecA TERM 657 1021581 - 1021596 + G 75 -4.6 -4.57569 | GAATGCTGGACCGCA TCCTCG TGCC CGTGGA TTTTTCGGAGAATGC TERM 658 1021771 - 1021759 - g 79 -4.7 -4.82901 | overlap 1021760 TGGCCCTGAGAAAAA GGCCC GAC GGGCA CTGGCGACGATGGGC SRU_0802 1020794 - 1022029 + | universal stress protein TERM 659 1022051 - 1022094 + T 74 -10.2 -3.75535 | gap 1, overlap 1022032 1022055 CGGTGCATCGGGGGG CCTATTGAGGGCCGGCGCCGC CTC GCGCCGCCC-CCCTCAGTGCG TTTGGCTCTCTATAC SRU_0803 1022997 - 1022104 - | phage integrase family site specific recombinase TERM 660 1022323 - 1022353 + g 73 -11.1 -3.75153 | overlap 1022315 GAGGTAGCCGTTGAT GCGGCTTCGCACC GACCG GGTTTGGAGCCGC TTTCCCTTCGACCGG TERM 661 1022720 - 1022731 + g 72 -7.2 -4.1899 | CGGTTGCCCTTCACG CCCG TGGC CGGG TTTTCGGTCAGCTCG TERM 662 1022920 - 1022948 + g 76 -5.9 -4.4648 | AAACGAGTTCAGGGA GCGGCGGTACG TGCCCAC CGTCTCGTCGC TTTTGTCCTCCAGGT TERM 663 1023677 - 1023662 - g 72 -6.8 -4.25104 | gap 1, opp_overlap 1023662 1023664 1023675, overlap 1023663 GTCCCCGGAGCAAAA GGTGGGG CTG CCCC-CC GGCTCCGTCGTGTTT corA 1023513 - 1024697 + | magnesium and cobalt transport protein CorA SRU_0805 1024815 - 1025387 + | hypothetical protein SRU_0806 1025567 - 1026613 + | phosphate-selective porin O and P superfamily protein SRU_0807 1027448 - 1026708 - | hypothetical protein SRU_0808 1028387 - 1027509 - | small conductance mechanosensitive ion channel (MscS) family protein SRU_0809 1029471 - 1028428 - | hypothetical protein SRU_0810 1029616 - 1031433 + | TrkA domain-containing protein SRU_0811 1033556 - 1031637 - | 2-oxo acid dehydrogenase acyltransferase catalytic subunit hppA 1033546 - 1035945 + | membrane-bound proton-translocating pyrophosphatase TERM 664 1035975 - 1036001 + Tr 100 -23 -5.07652 | CTGTGTCTTCCTGTC CCCCCGGCCGGG CGC CCCGGTCGGGGG TTTTGTTTTGAGGCC SRU_0813 1036601 - 1036035 - | peptidyl-tRNA hydrolase TERM 665 1036656 - 1036635 - R 100 -15.1 -4.84918 | opp_overlap 1036635 GGGAGAAATAGAAAA GGGCGACCG GGGT CGGCCGCCC TTCTGGGGGTCAAAT TERM 666 1036635 - 1036656 + r 74 -12.9 -3.31263 | opp_overlap 1036635 GGGAGAAATAGAAAA GGGCGACCG GGGT CGGCCGCCC TTCTGGGGGTCAAAT SRU_0814 1037454 - 1036702 - | 50S ribosomal protein L25 SRU_0815 1038583 - 1037621 - | ribose-phosphate pyrophosphokinase TERM 667 1037989 - 1038030 + g 70 -12.9 -3.01712 | gap 1 GGCGCTTGTCGATGA GGGCCAG-GTCCACGCCCAG GCG CTGGGCGTAGGCGCGGGCCA TCTTGAGGCCGCCCA TERM 668 1038160 - 1038146 - G 79 -7 -4.59773 | CGGGACGTCGAAAAA GCCCTG GAT CTGGGC GGCGTGAAGCTCCAT SRU_0817 1040177 - 1038837 - | translation initiation factor eIF-2B alpha subunit TERM 669 1040275 - 1040264 - gH 100 -2.2 -5.89827 | overlap 1040266 1040268 AAGTAGTAAAAAAAA CAGA GGCA CCTG CCGCCATGTCGACCC TERM 670 1040279 - 1040266 - gH 73 -3.7 -4.5787 | overlap 1040264 1040268 GTAGTAAAAAAAACA GAGGC ACCT GCCGC CATGTCGACCCTTCA TERM 671 1040380 - 1040425 + GH 73 -13.2 -3.14132 | ACTCGAGAGGCCCGG CCGGGGCCGGTCGACGCGAG GCCCGA CTCGACTCGATCGGTACCGG TTGATCGGGACACGA SRU_0818 1040119 - 1041702 + | TPR-containing protein Mql1, putative TERM 672 1042377 - 1042389 + G 74 -5.5 -4.56597 | CTTTCGGGTCGACGA GACCT ACG GGGTC TTTTTCGAGCCGCGG SRU_0819 1041874 - 1042497 + | hypothetical protein SRU_0820 1042873 - 1042568 - | hypothetical protein TERM 673 1042998 - 1043018 + r 71 -9.6 -3.72027 | GTTCGGTGCCATTCC GGGCCGGC AGCCG GGCGGCCC TTATTCGTAGAGGAT mrp 1044143 - 1043019 - | mrp protein SRU_0822 1045399 - 1044392 - | Ppx/GppA phosphatase family prmA 1046202 - 1045360 - | ribosomal protein L11 methyltransferase TERM 674 1046019 - 1046040 + gr 70 -10.1 -3.64609 | gap 1, opp_overlap 1046005 ACAGCGCATCGGGGT GCCCGTC-GG CGG CCAGGCGGGC TTTCAACTGCTTCTG ubiE 1046962 - 1046228 - | ubiquinone/menaquinone biosynthesis methyltransferase UbiE pfkA 1048354 - 1047272 - | 6-phosphofructokinase TERM 675 1047769 - 1047797 + gr 77 -13.9 -3.35996 | ACAGCCGGTTGTGGG CGTCGGCCGTATC GCG GATGCGGTCGATG TTGTCGATGGCCGTA TERM 676 1048347 - 1048296 - GR 70 -7.9 -4.09656 | gap 2, overlap 1048293 GGGAAAAGAGAAGAA GGCAGCGGCCCGGGCT-GGCCC-TC ACCG GACGGGCCGAGGGCGCGCCACCACC ATACCAATCTGACGA SRU_0826 1049282 - 1048317 - | hypothetical protein aat 1050000 - 1049320 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 677 1049851 - 1049824 - G 72 -6.8 -4.18018 | opp_overlap 1049824 1049839 GGCGGTCACCGAAAA CTCCCGCCGCCG CACC CGCCGACGGAGG TTGTGGGGGATGTGG pycA 1050092 - 1050652 + | pyruvate carboxylase TERM 678 1051262 - 1051238 - g 72 -13.5 -3.19602 | overlap 1051236 GGCCCGAGACCAACA CGCGCCGCATC GTC GACGCGGTGCG CAGCGGCTGGCTGCT dfrA 1050649 - 1051683 + | dihydroflavonol 4-reductase SRU_0830 1052359 - 1052108 - | hypothetical protein SRU_0831 1052717 - 1053358 + | hypothetical protein TERM 679 1053906 - 1053882 - g 78 -15 -3.29043 | AATGTTTGCCCAGAA GGCCATCCGC GCCTG GCGGACGGCC TCCGGGCCCGGACGC SRU_0832 1053418 - 1054071 + | hypothetical protein SRU_0833 1056293 - 1054200 - | chemotaxis transducer, putative TERM 680 1055006 - 1055037 + g 75 -9.2 -4.10161 | overlap 1055025 GGCTGCCGTCCCCGG CGGCCTCGGCGACC TGCT GGACGCTGCGGGCG TTTTCCCCGATCGTC SRU_0834 1060094 - 1056663 - | two component system histidine kinase, putative TERM 681 1056867 - 1056896 + g 74 -12.1 -3.59979 | CGGATCCATGCCAAT GCCGGTGTCTTCG ACGT CGAGGACGGCGGC TTTCCCCTCGCGGGC TERM 682 1057188 - 1057198 + g 70 -2.4 -4.62336 | opp_overlap 1057187 1057188, overlap 1057186 GAGCGTGTTCAAAAG CCGG CGG CCGC TTTTTCCGATGAGGT TERM 683 1057240 - 1057222 - G 72 -11.7 -3.5393 | opp_overlap 1057239 ATGAGGTTCGCGAAA CGGAGGG CGGCC CCCTCCG CGTCCTGCGTCTCCT TERM 684 1057329 - 1057380 + g 77 -15.6 -2.95081 | overlap 1057325 CATGTTCGCGAGCAT GGCGGACTTGGCCCGGCTGGCGGC CTCC GCCTCCGCCCGGGCCGTCTCGGCC TCCTCTTTTGCCTCG TERM 685 1059149 - 1059118 - G 72 -11.4 -3.53224 | opp_overlap 1059106, overlap 1059106 1059103 GAGCCGTCCTCGAAA TGCCGGACGGTCTC CTCT GCGCCCGACCGGCA GCACGCCTGAAACAG TERM 686 1060131 - 1060189 + H 74 -9.6 -3.95435 | gap 3, opp_overlap 1060129 1060131, overlap 1060133 CCCAAGAGATACACA GT-CGTCGCGGCGCGCCCTGCGTC-ATCG CGAA CGATCGGCGCAGGGTAAGCCGCT-CGTAC TTATCTTTTAGACAA TERM 687 1062275 - 1062243 - g 82 -4.9 -4.9218 | gap 2 GACGTACGACAAAAA GACTCGGCGG--CGT CATTC ACGTACCGTCGAGTC AATCCCGTGTACGAG SRU_0835 1061013 - 1063751 + | two-component hybrid sensor and regulator TERM 688 1065560 - 1065549 - g 72 -5.8 -4.33675 | AGTACATCATGAAAA CCAG TGTG CTGG CGGCCTACGTGGCCC SRU_0836 1064027 - 1066117 + | response regulator receiver domain-containing protein SRU_0837 1068737 - 1066209 - | tyrosine decarboxylase, putative TERM 689 1067890 - 1067868 - G 73 -9 -3.9712 | overlap 1067871 GTACTGGAGCAGAAA CGAGGCGAGC CCG GCCCGCCGCA CGCTGGGGAGCGCCT TERM 690 1069432 - 1069420 - g 80 -9.1 -4.25283 | overlap 1069421 AGGCGGTGATCAAAA CCCTC CGC GAGGG GGAGGCCGCGCTCCG SRU_0838 1068969 - 1069454 + | PTS system, IIA component hisS 1069525 - 1070832 + | histidyl-tRNA synthetase SRU_0840 1070963 - 1072123 + | endonuclease/exonuclease/phosphatase family protein SRU_0841 1073986 - 1072622 - | amine oxidase TERM 691 1073170 - 1073117 - G 70 -11 -3.55801 | gap 2, overlap 1073107 ACGAAGGTGGCGAAA CCGCATCGACTCGGCCACCGACCG CACCGCCT CGGGCGGCGGCGG-GTCGA-GCAG ATGAAGCACGCGCGT TERM 692 1073455 - 1073429 - G 85 -6.4 -4.8622 | overlap 1073414 GGCCTCAAGTAAAAA CGTCTTGAGGTC GAG GCCCTCCAGGCG ATCCCCCGCCACGCG SRU_0842 1075565 - 1073970 - | hypothetical protein TERM 693 1075557 - 1075517 - G 100 -23.4 -3.00298 | gap 1, overlap 1075501 TTGGGGAATCAGACA CCGA-CGCCCCTCCCCCGC CGGG GCGGAAGAGGGGCGATCGG TCATGCATCACCGGG SRU_0843 1076864 - 1075605 - | hypothetical protein TERM 694 1076929 - 1076887 - R 70 -10.5 -3.61715 | gap 1, opp_overlap 1076889 1076890, overlap 1076888 TATCTGTGTGAAGAA GGCGCTCCGCCTCCCAGGAT CAGG ATCCGGGG-GGCGGAGCATT TTTCTGTGTGGGGTT TERM 695 1076928 - 1076888 - R 72 -14 -2.76815 | gap 1, opp_overlap 1076889 1076890, overlap 1076887 ATCTGTGTGAAGAAG GCGCTCCGCCTCCCAGGAT CAGG ATCCGGGG-GGCGGAGCAT TTTTCTGTGTGGGGT TERM 696 1076889 - 1076927 + r 100 -17.5 -5.03994 | gap 1, opp_overlap 1076888 1076887, overlap 1076890 TCTGTGTGAAGAAGG CGCTCCGCCTCCCAGGAT CAGG ATCC-GGGGGGCGGAGCA TTTTTCTGTGTGGGG TERM 697 1076890 - 1076926 + r 100 -21 -3.61674 | gap 1, opp_overlap 1076888 1076887, overlap 1076889 CTGTGTGAAGAAGGC GCTCCGCCTCCCAGGAT CAGG ATCC-GGGGGGCGGAGC ATTTTTCTGTGTGGG SRU_0844 1079504 - 1076943 - | putative TonB-dependent outer membrane protein SRU_0845 1079790 - 1079554 - | hypothetical protein glgB 1081834 - 1079966 - | glycogen branching enzyme TERM 698 1080525 - 1080536 + g 77 -5.8 -4.62069 | TCGCCCGGCATTTTG CTCC ACAG GGAG TTTTTGCCGTGCACC SRU_0847 1085338 - 1081880 - | trehalose synthase TERM 699 1083512 - 1083536 + g 81 -12.8 -3.84406 | CAGGCCCTCGGCGAC CGGCAGCACC GGACG GGTGCGGCCG TTCTTGTCCTCGAGG SRU_0848 1087343 - 1085352 - | alpha amylase family protein TERM 700 1087572 - 1087590 + G 72 -5.3 -4.33754 | gap 1, overlap 1087574 1087575 TGGTTCACGTTGAGC GCTGCAGA CTGC TCTGC-GC TTTTGAGTTGTCCTT TERM 701 1089201 - 1089239 + G 72 -14 -3.01924 | gap 1 GGCGCAAGCGCAGCA TCATGGCCACGCTCCTG CTGTCA CAGG-GCGTGCCCATGA TCTTGGGCGGGGATG glgX 1087502 - 1089796 + | glycogen debranching enzyme GlgX gfo 1089816 - 1091213 + | glucose-fructose oxidoreductase TERM 702 1091590 - 1091580 - f 72 -2.4 -4.79352 | opp_overlap 1091580 1091583, overlap 1091575 GGAGGCAGAACAAAA GGCG GAT CGTC TCTTGGTCGAGGCGG TERM 703 1092576 - 1092592 + G 74 -2.1 -4.72986 | overlap 1092577 GAACTGGATCCCGAT GCCCCAA AAG TCGGGGA TTTTTAGTGGGGATG SRU_0851 1091707 - 1093263 + | hypothetical protein SRU_0852 1093356 - 1096190 + | zinc-dependent carboxypeptidase domain-containing protein TERM 704 1096357 - 1096369 + GT 82 -6.2 -4.77157 | opp_overlap 1096344 1096337 AACCGACGCCTGAAT CGGC TGAGC GCCG TTTTTGCTCCGTTGG TERM 705 1096809 - 1096789 - gT 77 -3.9 -4.74706 | overlap 1096790 GTCAAGAGGGAAAAA GGCCAGAAG ACC CTTCCAGCG GCAGATAAGCTGTTT SRU_0853 1096099 - 1096992 + | ISSru4, transposase SRU_0854 1097521 - 1097120 - | mutant NtrC-like activator SRU_0855 1098907 - 1098230 - | TRK potassium uptake system protein TERM 706 1099399 - 1099374 - H 100 -14 -5.0916 | GTGGGAATAGAAAAA CCCGCCTCGG GAGCGA CCAAGGCGGG ATTCGGAAGGGACAG SRU_0857 1099984 - 1101171 + | putative DNA polymerase III, delta' subunit SRU_0858 1101287 - 1102054 + | hypothetical protein TERM 707 1102035 - 1102067 + F 83 -7.6 -4.65895 | opp_overlap 1102021 1102056, overlap 1102036 ACGAGGCCCGCCGGC TGCTCGACGACCTC GACTA GAGGCCATCGGGCG TTTTTACATCGAGCG SRU_0859 1102240 - 1103034 + | hypothetical protein TERM 708 1103646 - 1103606 - g 75 -11.8 -3.64703 | gap 2, opp_overlap 1103601 GCCGTCCGAGTCAAA CGC-CGCC-CACGCCCGAGG CCG CCTCGGGAGAATGGCGCGCG GGCGATACCTTTGTG TERM 709 1103860 - 1103833 - g 77 -15.6 -3.07443 | GCACACGTGACCGAA CCACCGTCTCCA GGCC CGGAGACGGCGG CACCGCCCATGAACC SRU_0860 1103080 - 1103883 + | hypothetical protein SRU_0861 1103901 - 1105730 + | hypothetical protein groS 1106183 - 1105761 - | chaperonin, 10 kDa TERM 710 1106248 - 1106225 - R 84 -3.8 -5.18357 | gap 1, overlap 1106227 GAACGGAGCAAAAAA GACGG-CAGGC CTA ACGTGGCCGTC GACCGCAGGTTCATG SRU_0863 1106427 - 1106335 - | hypothetical protein pgl 1107467 - 1106637 - | 6-phosphogluconolactonase TERM 711 1106820 - 1106786 - G 86 -7.7 -4.91109 | gap 1, overlap 1106788 CGGCCACGAGAAAAA CGGCCCGCCGGGCGCC GTTG AGCG-CCGGCAGGGTG CACGTGAGGCGGCGG SRU_0865 1108451 - 1107483 - | sensor histidine kinase TERM 712 1107564 - 1107534 - G 86 -6.9 -4.87803 | gap 2 CAGGGTGAAATAAAA CGT-G-GAGCCCTCC TCG GGAGCGCTCTCGACG TGAAGTTCGCGATCG TERM 713 1108688 - 1108653 - R 71 -5.2 -4.42851 | gap 1, overlap 1108646 1108654 TTAACAAACCGAAAA CCGTCCCCGGCGAGGCG CTA CGGGGCGCTGGGGA-GG CCCGCCTCGTCGTCG SRU_0866 1109416 - 1108670 - | GlcNAc-PI de-N-acetylase family TERM 714 1109001 - 1108972 - G 73 -12.2 -3.36823 | GGGTGTAAAACGCAA GCCGGCGA-GGGGC GGTG GCCCCGTCGC-GGC GAAGGGCGCACACCG SRU_0867 1109736 - 1109524 - | hypothetical protein SRU_0868 1110708 - 1109764 - | periplasmic binding protein SRU_0869 1111272 - 1110730 - | hypothetical protein SRU_0870 1112524 - 1111328 - | hypothetical protein TERM 715 1111473 - 1111448 - G 71 -9.7 -3.76815 | gap 1, overlap 1111441 ACTGAAAAGTGGAAA CCCACCTGCACC AAC GG-GCAGACGGG TCACGTACAGGTCCT SRU_0871 1114513 - 1112537 - | iron compound TonB-dependent receptor, putative TERM 716 1114100 - 1114156 + g 71 -14.3 -2.91264 | opp_overlap 1114096, overlap 1114102 GGTGGGAAGCAGCGA CAGGTCCACCTGGCCCGTCTGCGGGTT CGC AACGCGCAGGCCGTCGAGCAGGACCTG TGTCTGCGTGCCGCC TERM 717 1114548 - 1114521 - R 100 -10.5 -4.99035 | overlap 1114538 GCAGCCATAGAAAAA GCCCTCACCTC AGTACA GAGGCGCGGGC GGCTGCACGGGGCCC SRU_0872 1115575 - 1115180 - | hypothetical protein TERM 718 1115980 - 1116032 + G 100 -24.8 -2.75481 | gap 1, opp_overlap 1115970 AGAGACCGTGACGGT GGCGGGGC-GGGTCACGGCGGGGCG AGGG CGCCTGGCCGTGTCCCGGCCCCGAC TGGTTGCGGTTCAGG SRU_0873 1115735 - 1117741 + | sensory transduction histidine kinase SRU_0874 1118617 - 1117769 - | haloalkane dehalogenase TERM 719 1118573 - 1118519 - G 78 -15.6 -3.14132 | gap 1, overlap 1118524 GTTGCCGTGGAGGAA GACGACGGGCGGCCCGCT-GCCCGC GTCGGT GTAGGCGAGCGGGCCGGCCGGGGTC TGAACGGTCCGCGTG TERM 720 1118568 - 1118524 - G 80 -17.1 -2.77523 | gap 1, overlap 1118519 CGTGGAGGAAGACGA CGGGCGGCCCGCT-GCCCGC GTCGGT GTAGGCGAGCGGGCCGGCCG GGGTCTGAACGGTCC SRU_0875 1119607 - 1118648 - | DeoR family transcriptional regulator SRU_0876 1120326 - 1119685 - | hypothetical protein SRU_0877 1121309 - 1120608 - | hypothetical protein TERM 721 1120826 - 1120844 + g 79 -11.6 -3.86202 | TGTCCTCCATGCTGT GGACGGGG AGC CCCCGGCC TTTCATCTCGTCGAG SRU_0878 1122161 - 1121475 - | hypothetical protein SRU_0879 1123369 - 1122233 - | extracellular solute-binding protein SRU_0880 1124291 - 1123566 - | NAD-binding domain-containing protein SRU_0881 1125295 - 1124501 - | hypothetical protein TERM 722 1126104 - 1126125 + G 77 -13.7 -3.35679 | gap 1 CCTCAGCGACGAGGC GCGGGCC-CG CCT CGAGGCCCGC TTCTGCCTCCGCAGC SRU_0882 1125454 - 1126197 + | rRNA methylase SRU_0883 1128612 - 1126231 - | TPR repeat-containing protein TERM 723 1127386 - 1127427 + g 77 -10.1 -3.91897 | gap 1, overlap 1127382 1127422 GGGGTACTGCGCGGC GAGGTCCGCCATTGCGTCCT CGT AGG-CGTCGTCGCGGGCCTC TTTGTCCATCGGGGC TERM 724 1127902 - 1127880 - G 76 -2.6 -4.94992 | overlap 1127881 CGAAAGGGAGAAAAA TGATGCATGC ACT GCCTACATCC GCCCTCCGTAAAGGT TERM 725 1130257 - 1130244 - g 71 -3.1 -4.64676 | gap 1, overlap 1130247 1130248 CGAGCCCGAAGAAAA CGA-GC GGC GCGTCG AGGCCTTCCTGGCCC sun 1129132 - 1130415 + | ribosomal RNA small subunit methyltransferase B SRU_0885 1130601 - 1131653 + | hypothetical protein SRU_0886 1132292 - 1131729 - | hypothetical protein TERM 726 1133105 - 1133126 + H 85 -14.5 -3.62046 | AGTCAGGAGCTTCGT GCTTCCGGA GGTG TCCGGAAGC TTGTTGGGCAAATGA TERM 727 1133323 - 1133305 - H 78 -6.6 -4.60073 | opp_overlap 1133304, overlap 1133297 GACATAACGAGAAAA CTCACCTG ACC CGGGCGAG GTATCGTTCGGTCGA TERM 728 1133451 - 1133441 - H 77 -2.4 -5.03314 | CTGAGCCGCAAAAAA GCGG CAG CAGC CCGAAGGTGTAGCGG TERM 729 1134011 - 1134025 + H 71 -5.7 -4.33165 | ACTGCACCAGCCTGA GCTGA CTCCT TCAGC TTTTCCTCAATTTCG TERM 730 1134840 - 1134817 - g 85 -8 -4.7173 | opp_overlap 1134832 TACCACACGGAAAAA GCGTACGTCC GCTG GGCCGAACGC TTCGCCTGCTTCCAC SRU_0887 1134702 - 1135658 + | integron integrase subfamily protein ligA 1137853 - 1135781 - | DNA ligase, NAD-dependent TERM 731 1137194 - 1137218 + g 70 -2.1 -4.63527 | gap 1 GAGCGAGCCGGCGGC GGCGTTGCGC GGGTTG GCG-AACACC TTTTTGCCCTCCTCC SRU_0889 1138111 - 1138953 + | hypothetical protein TERM 732 1139158 - 1139210 + F 100 -12.6 -5.04249 | gap 2, overlap 1139160 TCCCCCACAGTTCCC CTTTGTCC-CACGGC-GGACCGCGCC CCA GGCGCCGCCCCGCCGTGCGGTCGATG TTTGTTTTTTGACGA TERM 733 1139160 - 1139208 + F 93 -13.8 -4.13692 | gap 2, overlap 1139158 CCCCACAGTTCCCCT TTGTCC-CACGGC-GGACCGCGCC CCA GGCGCCGCCCCGCCGTGCGGTCGA TGTTTGTTTTTTGAC TERM 734 1140734 - 1140756 + G 70 -10.6 -3.60627 | CGAACTCCTCGAGGG CCTCGTCG GCAGCTA CGACGAGG TTTCGGATGCCGTGC TERM 735 1142030 - 1142012 - g 79 -3.7 -4.91109 | overlap 1142015 CCTGGAGCAGAAAAA CGAGGCC GCCGT GGCCCTG ACGAAGGTGGAGACC smc 1139241 - 1142801 + | chromosome segregation protein SMC SRU_0891 1142856 - 1143971 + | small conductance mechanosensitive ion channel (MscS) family protein SRU_0892 1145556 - 1144102 - | methyl-accepting chemotaxis protein TERM 736 1146616 - 1146634 + G 74 -2.3 -4.73388 | gap 1, overlap 1146617 GGCGTTGACCGTGGA C-GTGGCC CTCT GGCCCCTG TTTTTGCTGGACATT TERM 737 1146738 - 1146795 + G 85 -10.3 -4.16943 | gap 1, opp_overlap 1146747, overlap 1146738 ATGATCTGGGGGCGT C-CGACACGACTGCGGCGGCGGGCGACG AGT CGCCGCTCGCCGGCATCCCCGTGTCGAG TTTTCGCGTGTCCGG TERM 738 1147831 - 1147802 - g 100 -14.3 -4.53303 | gap 1 CAGCCGCAGATAAAA GGGCAGCT-CGCCG GAA CGGCGGATCTGCCC CGCCTCGCATCCCTC SRU_0893 1146515 - 1149280 + | hypothetical protein SRU_0894 1150462 - 1149314 - | beta-lactamase TERM 739 1149922 - 1149883 - G 72 -12 -3.53012 | opp_overlap 1149883, overlap 1149886 TGCCGGTGCTGTAAA TCATGTCGCCCCCCGGCC GGTC GACCAGGGGGCGCCGCAA TGCATTCGCCACCCA TERM 740 1149919 - 1149886 - G 71 -13.7 -2.90496 | opp_overlap 1149883, overlap 1149883 CGGTGCTGTAAATCA TGTCGCCCCCCGGCC GGTC GACCAGGGGGCGCCG CAATGCATTCGCCAC ggt 1150913 - 1152739 + | gamma-glutamyltransferase SRU_0896 1152965 - 1153267 + | hypothetical protein purF 1155021 - 1153321 - | amidophosphoribosyltransferase SRU_0898 1155402 - 1155106 - | hypothetical protein SRU_0899 1157124 - 1155601 - | sodium- and chloride-dependent transporter SRU_0900 1158633 - 1157131 - | sodium- and chloride-dependent transporter TERM 741 1157960 - 1157920 - G 85 -10.5 -4.18018 | overlap 1157904 GGGCGTCAGGTAAAA TTCGAGCCCGGCACCC-GC ACCGG GCAGGGTGACGG-CCCGAA AGGCGATGAGGCAGA SRU_0901 1158951 - 1158703 - | hypothetical protein TERM 742 1158808 - 1158787 - G 75 -12.9 -3.35679 | overlap 1158768 CTGCGCGAGGTAGAA GGGCGGGCC GGCC GGCACGCCC TCGCCCGAGAGGCGC ald 1160188 - 1158965 - | alanine dehydrogenase SRU_0903 1160448 - 1161368 + | NADP oxidoreductase coenzyme F420-dependent superfamily protein TERM 743 1161966 - 1161952 - g 72 -7 -4.18018 | TCTGTGCACCGAAAA GTCCCC GGT GGGGCC GGCGTCGGCGGCCGA SRU_0904 1161509 - 1162177 + | hypothetical protein lysS 1162313 - 1163857 + | lysyl-tRNA synthetase TERM 744 1164104 - 1164075 - T 100 -19.3 -5.14563 | overlap 1164097 GGCCCCATCAAAAAA CGGGCGGACCCCC GCGA AGGGATCCGCCCG CAGAGGCGGCTCAAA SRU_0906 1165110 - 1164139 - | hypothetical protein TERM 745 1165181 - 1165160 - R 73 -6.5 -4.31164 | gap 1, overlap 1165161 CCGAGAGAAGAGAAA CGGTGGCTCC CCA GG-GCCACCC CCACTGGAGAGTTCA rpsT 1165761 - 1165441 - | ribosomal protein S20 TERM 746 1165636 - 1165648 + g 79 -6.9 -4.67038 | CTTCTGCGACTTGTT GCGCT TCT GGCGC TTTTCATTTTGCCGC SRU_0908 1166105 - 1166887 + | M24/M37 family peptidase SRU_0909 1166938 - 1167438 + | hypothetical protein SRU_0910 1168080 - 1168325 + | hypothetical protein TERM 747 1168528 - 1168504 - g 75 -13.6 -3.39784 | overlap 1168502 GCATCGTCAACAACA CCATCCTCGG GCACG CCGAGGACGG CTACTACCTCAACCT TERM 748 1168778 - 1168803 + G 77 -11.2 -3.88787 | GGCGGTCCGCACCAG TGGGGAGGTC GTCGCG GACCTCTCCA TTTCTCGGCATCTCA SRU_0911 1168377 - 1169615 + | ATP synthase F0, A subunit atpE 1169715 - 1169945 + | ATP synthase F0, C subunit atpF 1170146 - 1170760 + | ATP synthase F0, B subunit atpH 1170818 - 1171390 + | ATP synthase F1, delta subunit atpA 1171450 - 1173105 + | ATP synthase F1, alpha subunit atpG 1173258 - 1174184 + | ATP synthase F1, gamma subunit TERM 749 1174373 - 1174401 + F 100 -10.9 -5.26119 | overlap 1174374 CCTCTCCGCCGTCCG CGCCGGTCCCGAT CCT GTCGGGACGGGCC TTTTCTTTTTCGGGC TERM 750 1174374 - 1174400 + F 88 -14.4 -3.74587 | overlap 1174373 CTCTCCGCCGTCCGC GCCGGTCCCGAT CCT GTCGGGACGGGC CTTTTCTTTTTCGGG SRU_0918 1174474 - 1175940 + | nucleoside-diphosphate-sugar epimerase TERM 751 1175972 - 1175992 + F 76 -8.9 -4.11692 | overlap 1175969 CTCACGAACCCTGTT CCGCCCGAT CCG GTCGGGCCG TTTTGCCCCTCGATG TERM 752 1177057 - 1177075 + G 78 -5.9 -4.59773 | CAAGGCCGAGGACGA CCCGTCC AAGTG GGACCGG TTTTTCGAACTCCGC SRU_0919 1176005 - 1177270 + | putative deoxyribonuclease SRU_0920 1178528 - 1177308 - | Renal dipeptidase superfamily protein TERM 753 1178063 - 1178082 + g 89 -10.6 -4.18018 | CCACGTTGTCGAGTT CGCCGCCG AGGC CGGCGCCG TTTTCCATGCCCAGG TERM 754 1178596 - 1178634 + r 72 -8 -4.13767 | gap 1, overlap 1178597 CCGAAGCGGGGGGTC ACCTGCGCG-GCGCAGG GGTAGG CAGGCGCTCGCGCAGGG TTTTCAGGTACGACG fecB 1179400 - 1178594 - | ABC-type Fe3+-siderophores transport systems TERM 755 1178851 - 1178861 + g 72 -8.2 -4.07568 | GGTACCGGGTCTGAT CGCC GTA GGCG TTTTCGAGGCCGCCC SRU_0922 1179536 - 1180606 + | truncated methionine synthase-like protein mpl 1182083 - 1180608 - | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 756 1182062 - 1182039 - G 85 -13.2 -4.13767 | gap 1 GTCGGGACGCGAAAA CTGCCGGA-GC GAC GCGTCCGGCAG GTCGTCGATGGGACG SRU_0924 1183302 - 1182115 - | hypothetical protein TERM 757 1182745 - 1182769 + g 76 -8.5 -4.25104 | opp_overlap 1182747, overlap 1182748 GGAGTTGAAGCGGAA GAGGTTCCGCA GGA TGCGGGACTCC TTTTCCTCAAAGACG SRU_0925 1187544 - 1183618 - | multidrug resistance protein, putative TERM 758 1187575 - 1187622 + r 70 -11.9 -3.22298 | gap 1, overlap 1187576 TGGTACGAGGCAGAG TGTCTATCGG-GGCGTGGGGCG CGCGC CGCCCCGCGTCACCGTGAGGCG TTCCTGGTCAGTCGG SRU_0926 1188832 - 1187630 - | RND family efflux transporter MFP subunit SRU_0927 1190631 - 1188889 - | outer membrane efflux protein SRU_0928 1191310 - 1190609 - | TetR family transcriptional regulator SRU_0929 1193064 - 1191565 - | ABC1 family protein SRU_0930 1193654 - 1193064 - | hypothetical protein SRU_0931 1195498 - 1193882 - | putative thiosulfate sulfurtransferase, putative TERM 759 1194877 - 1194863 - G 77 -5.6 -4.57569 | overlap 1194865 CCAGTCCTCCAAAAA GCCGTC GTA GACGCC GACCGCCTCAAAGCC TERM 760 1195241 - 1195216 - G 83 -4 -5.1523 | gap 1 GGCATAACAGAAAAA CGCTCGC-CAA CGAAT TTGAGGGAGCG GGCGATAAGACGCAA SRU_0932 1196107 - 1195676 - | CoA-binding domain-containing protein TERM 761 1196753 - 1196736 - g 81 -5.5 -4.72986 | overlap 1196739 CAGCTCTACGAAAAA GGACTCG CCTA CCAGTCC GAGGAGCCGGTGTGG TERM 762 1197377 - 1197351 - g 81 -10.8 -4.15044 | overlap 1197353 GCGTTCGCCAACAAA TACGACCTGCCG ATC CGGGAGGTCGTG GAGGGGGGCGACATC TERM 763 1197375 - 1197353 - g 79 -13.4 -3.6761 | overlap 1197351 GTTCGCCAACAAATA CGACCTGCCG ATC CGGGAGGTCG TGGAGGGGGGCGACA TERM 764 1197849 - 1197833 - g 71 -12.3 -3.31461 | CATCGACCCGGACAA CGACGAG CAG CTCGTCG ACCCGGAGAAAGAAG leuS 1196295 - 1198886 + | leucyl-tRNA synthetase SRU_0934 1199008 - 1199766 + | GlcNAc-PI de-N-acetylase family efp 1199939 - 1200517 + | translation elongation factor P accB 1200563 - 1201192 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 765 1201217 - 1201239 + F 100 -14.8 -4.4261 | overlap 1201218 GTCTTGTCATGCTGA TGGCTCCGGG AAG CCCGGGGCCG TTTTCATGTTGAGCC TERM 766 1201218 - 1201238 + F 86 -16.1 -3.25084 | overlap 1201217 TCTTGTCATGCTGAT GGCTCCGGG AAG CCCGGGGCC GTTTTCATGTTGAGC accC 1201349 - 1202824 + | acetyl-CoA carboxylase, biotin carboxylase TERM 767 1202923 - 1202896 - f 93 -13.4 -4.14739 | gap 1, opp_overlap 1202891 GCAGTCAGGGGAAAA CGTGCCCGTCTCC TTG GG-GCCGGGCACG CCGACATTCTTCTTT SRU_0938 1202963 - 1204177 + | aspartate aminotransferase SRU_0939 1204241 - 1205488 + | peptidase, M50 family protein SRU_0940 1205575 - 1206108 + | hypothetical protein SRU_0941 1206276 - 1207721 + | hypothetical protein SRU_0942 1207859 - 1208836 + | hypothetical protein SRU_0943 1209667 - 1208870 - | hypothetical protein TERM 768 1209131 - 1209118 - G 77 -3.7 -4.82901 | overlap 1209119 1209120 GCGCCTGCACAAAAA TGGCC GACA GGCCG AAGGTCGGCGCGGTG SRU_0944 1212277 - 1209758 - | acylaminoacyl-peptidase TERM 769 1210384 - 1210394 + g 79 -2.4 -4.98255 | TATCGCGGGCAGGAC CGGG GCC CCAG TTTTTGTCGTTAGCG TERM 770 1210987 - 1210972 - G 70 -6 -4.19238 | opp_overlap 1210980 GGGTGAAGCGGAAAA GGGGGC GTCC GCCCTC CGAGGGGGCCGTGGT SRU_0945 1213208 - 1212414 - | hypothetical protein TERM 771 1212640 - 1212621 - G 71 -3.4 -4.57569 | opp_overlap 1212639 GGAGCGGTCGAAAAA CGCGAGGC CGGT GCTTCCCG CGACGAACGGTTGGA TERM 772 1213146 - 1213185 + g 72 -12 -3.50332 | gap 1, opp_overlap 1213152, overlap 1213142 GGGGCGCATCCAGTC CAGCAACACACGGCTCCGG AGT CCGGGGCCGTGCGA-GCAG TTCATTCTCTCACTC TERM 773 1213180 - 1213152 - G 86 -18.1 -3.16881 | opp_overlap 1213146 1213142 CATCCAGTCCAGCAA CACACGGCTCCGG AGT CCGGGGCCGTGCG AGCAGTTCATTCTCT TERM 774 1213715 - 1213696 - g 70 -3.5 -4.56597 | GTTTCTGCTCAAAAA TCTCGAC TACGAC GGCGAGA CCTACACCTGGCGCA SRU_0946 1213214 - 1213990 + | alpha/beta fold family hydrolase SRU_0947 1214066 - 1214869 + | short chain dehydrogenase/reductase family oxidoreductase TERM 775 1214927 - 1214911 - T 100 -10.8 -5.86976 | GGAGAAAATAAAAAA GCCCCG GACCG CGGGGC GGGGAGGGGGAGGGC TERM 776 1214969 - 1214993 + T 74 -13.5 -2.86164 | CAAAAACCCTGGAGC GGACGGCAGCC TGT GGCTGCTGCCC TGTCGTAATTCACCC TERM 777 1215046 - 1215074 + T 100 -14.7 -4.38712 | TTTTGCTCCGCTAAC TTTCGGTGAACCG GGC CGATTCACCGAAA TTTTCTGCCCCTCAC SRU_0948 1216127 - 1215123 - | hydrolase, alpha/beta fold family protein SRU_0950 1217371 - 1216622 - | exonuclease, putative TERM 778 1218058 - 1218024 - gR 76 -9.8 -3.86897 | CCGACGTTCGACAAA GCGCTCCGGGCGCCGA TGC TCGACGCCCCCGGCAC GACATTCCGGTACGG SRU_0951 1217298 - 1218980 + | beta-lactamase, putative SRU_0952 1219537 - 1219067 - | hypothetical protein SRU_0953 1220401 - 1219562 - | ParA family protein SRU_0954 1221769 - 1220450 - | endonuclease/exonuclease/phosphatase family protein TERM 779 1220857 - 1220903 + g 72 -11.5 -3.61398 | opp_overlap 1220846 TAAACCGGATGTCCC CCGGGACGCGTCCGG-GCTGGAC CGA GTCCGGCGCCGGCCG-GTCGGGG TTGTTGAGCAGAAGG folK 1221778 - 1222332 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase dck 1222286 - 1223071 + | deoxyguanosine kinase/deoxyadenosine kinase subunit SRU_0957 1223117 - 1223386 + | hypothetical protein SRU_0958 1224302 - 1223400 - | TonB family protein TERM 780 1224373 - 1224390 + H 100 -12.7 -5.60993 | GATTAGTTCCTCTGC CCTCCCC ATTT GGGGAGG TTTTTTTATGGCCCC carA 1224443 - 1225603 + | carbamoyl-phosphate synthase, small subunit TERM 781 1226214 - 1226196 - g 72 -4.4 -4.44046 | overlap 1226197 1226199 TGGAGGCCAAAGAAA TCACCCAG GAG CTGGGAGG GCTGCCGGTCGTTAT TERM 782 1228005 - 1227966 - g 90 -18.6 -2.96452 | overlap 1227961 ATCCGGACAATGAGA TCCTGCTCGACCGCTTCC TCGA AGACGCGGTCGAGCTGGA CGTGGATGCCATCTG carB 1225724 - 1228552 + | carbamoyl-phosphate synthase, large subunit SRU_0961 1229806 - 1230489 + | phosphatidylserine decarboxylase-like protein TERM 783 1230609 - 1230663 + F 86 -12 -4.1711 | gap 2, overlap 1230611 TCCGGGCCTACCGGA GCGCGCGCCGCGAGCAGCGGGGCGAC CGGCC GCCGCCCCGC-G-TGGCGGTGCCCTC TTTCTTCACGCTGAT TERM 784 1230611 - 1230661 + F 81 -13.2 -3.68324 | gap 2, overlap 1230609 CGGGCCTACCGGAGC GCGCGCCGCGAGCAGCGGGGCGAC CGGCC GCCGCCCCGC-G-TGGCGGTGCCC TCTTTCTTCACGCTG SRU_0962 1230650 - 1231381 + | phosphatidylserine synthase purS 1231437 - 1231715 + | phosphoribosylformylglycinamidine (FGAM) synthase SRU_0964 1231790 - 1232137 + | ATP-dependent Clp protease adaptor protein ClpS, putative SRU_0965 1233299 - 1232154 - | hypothetical protein TERM 785 1232646 - 1232622 - G 70 -8.6 -3.97947 | gap 1 GCCACTCAGGACAAA CGACGAGT-CG GGCA CGTACTCGCCG CGGTCCCGGTCGTAC TERM 786 1233112 - 1233148 + g 71 -9.4 -3.767 | gap 2, opp_overlap 1233083, overlap 1233108 GGCGATACCGCCCGG GCCGG--CTTGGCCGTGG CGC CCGCGGCGAGGGTCCGGC TTTCATCGGTCCGTG SRU_0966 1233640 - 1233849 + | cold-shock DNA-binding domain-containing protein TERM 787 1233871 - 1233897 + T 100 -18.8 -5.63517 | CCCGGTCCACCCGAA TGCCCCTGAGCG TCC TGCTCAGGGGCA TTTTTTGTTTGGGGG TERM 788 1234338 - 1234356 + T 76 -6.7 -4.51777 | gap 1, overlap 1234324 1234338 GGTCACGAGCCTGGG CC-CGGAC TTCC GTCCGCGG TTTTGATTCTACTCT SRU_0967 1234577 - 1234365 - | hypothetical protein SRU_0968 1234767 - 1234967 + | hypothetical protein TERM 789 1235113 - 1235102 - T 76 -5.8 -4.59853 | overlap 1235108 CGAAGGTCCGAAAAA GGGA AAGC TCCC CAGGGCTACCGGAGT dapD 1235961 - 1235119 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 790 1235657 - 1235610 - G 74 -15.4 -2.64933 | gap 1, opp_overlap 1235644 GAGGCATGCAGACCA CGCCGGGCGCCACGTACGCCCCG GTC CGGATCGC-CGAGCCGCCCGGCA CGAGCCGCACGTTGT dnaG 1236378 - 1238345 + | DNA primase SRU_0971 1240220 - 1238379 - | hypothetical protein SRU_0972 1240964 - 1240266 - | glutamine amidotransferase, class I SRU_0973 1241584 - 1241066 - | hypothetical protein SRU_0974 1242311 - 1241850 - | SWIM zinc finger domain-containing protein guaA 1243071 - 1242334 - | GMP synthase TERM 791 1242430 - 1242402 - G 78 -5.9 -4.64657 | gap 1, overlap 1242404 GGAAATTCTCAAAAA CGCGGGTGGCGG TCCCGG CCGCCTCC-ACG TTGGCGTCCGTACAG TERM 792 1243751 - 1243779 + G 70 -11.7 -3.35522 | overlap 1243749 GATTCTCGATGTGCC CCGGGTGGAGATT GCC GACTTCCACCCGG TCTTTGGGGGGCTTG SRU_0976 1243338 - 1244819 + | hypothetical protein TERM 793 1244922 - 1244938 + G 75 -9.3 -4.05033 | GCGGGAGCCCCTCGT CCGCAGC CGC GCAGCGG TTTCTCTCCGATGAC TERM 794 1246097 - 1246129 + G 93 -9.8 -4.62069 | gap 1, opp_overlap 1246060, overlap 1246099 TACATGGTCCGCACC CTCCTCGCCCGACGG GATG CCATCGGGC-AGGCG TTTTTGGACTGGGGA SRU_0977 1244825 - 1246498 + | hypothetical protein SRU_0978 1246611 - 1246934 + | hypothetical protein dnaE 1250712 - 1247212 - | DNA polymerase III, alpha subunit TERM 795 1247712 - 1247748 + g 70 -13.5 -3.0792 | opp_overlap 1247704 1247705, overlap 1247727 CGCAGAAGGTGCGGA CGGGCCCCCGGTTGCGG CCG TCGCCCCCGGCGGCCTG TTCGATGACCTGTTC TERM 796 1250788 - 1250814 + r 71 -13.1 -3.05844 | gap 1, opp_overlap 1250785 1250782 1250781 AACTAAAACGACGCC CGCTCGGGAATC AATG GATTCCCG-GCG TCTTCCCATCAGGGC SRU_0980 1252126 - 1250984 - | xylose isomerase TERM 797 1251833 - 1251779 - G 83 -12.2 -4.07568 | gap 3 GCTGCGCCTGGAAAA CGCCT-CGGCCGCCTCGCGCTCG-TCG GGGT CGAGCGA-CGCGATCCCGCCGTAGGCG TAGTGCAGGTGGGCC SRU_0981 1253745 - 1252129 - | putative carbohydrate kinase SRU_0982 1255340 - 1253742 - | hypothetical protein TERM 798 1256572 - 1256555 - g 75 -6.9 -4.39386 | opp_overlap 1256569 CGGAAATTATGAAAA GCCTTCG ACTG CGACGGC CGGCGGCGCCCCAGC TERM 799 1257005 - 1256981 - g 73 -4.2 -4.65895 | opp_overlap 1256969 CGCCGGAGGTAAAAA TGCTCCGTCA GTTGT TGGCGCAGCA GAAGTACGAGCGGGC SRU_0983 1255447 - 1257435 + | TPR repeat-containing protein lgt 1258266 - 1257439 - | prolipoprotein diacylglyceryl transferase TERM 800 1257512 - 1257492 - G 70 -10.3 -3.70902 | overlap 1257493 GCTGCCACAGCCAAA GGCCCACCG CCA CGGCGGGCA CGCTGAGCAATTGGC TERM 801 1257511 - 1257493 - G 71 -13.8 -2.82327 | overlap 1257492 CTGCCACAGCCAAAG GCCCACCG CCA CGGCGGGC ACGCTGAGCAATTGG TERM 802 1258306 - 1258292 - H 86 -5 -5.15969 | GGGGAAGTGAAAAAA TTGGCA CTG TACCAA GCGATTCCGCCCCGT SRU_0985 1258424 - 1258786 + | citrate synthase family protein argS 1260534 - 1258846 - | arginyl-tRNA synthetase TERM 803 1260576 - 1260626 + H 74 -2.5 -4.82901 | opp_overlap 1260585 1260586, overlap 1260597 GTGATACGACCCCAA CCTATAGAACCGGCGGATGC-TCCG AAA TGGCCGCCT-CGCCGTTTCGATGGG TTTTTGTGGACGCAA TERM 804 1260916 - 1260892 - H 71 -5 -4.52589 | gap 1, overlap 1260893 GGGCTCCAGAGAAAA TCCCCAACTGG GTCT CC-GTCAGGGA CCACGCAGGGGGCGG SRU_0987 1261234 - 1261554 + | pectin degradation protein SRU_0988 1261639 - 1263009 + | recombination factor protein RarA TERM 805 1263276 - 1263288 + F 91 -9.1 -4.63527 | overlap 1263272 GTCGCGGATAACGTC GGCTC CCG GAGCC TTTTTCCGGTCCTGA SRU_0989 1263433 - 1264419 + | rhodanese-like domain-containing protein TERM 806 1264492 - 1264446 - f 74 -15 -2.57132 | opp_overlap 1264449 1264454, overlap 1264445 CCCCGTTCCGAGAAC CGTCAAGGGCCGCTCCGATCCG TCA CGGATCGGGGCGGCTTTTGTTG TTGGGTGTTATTGGG TERM 807 1264449 - 1264489 + F 100 -26.3 -3.75144 | opp_overlap 1264446 1264445, overlap 1264454 CGTTCCGAGAACCGT CAAGGGCCGCTCCGATCCG TCA CGGATCGGGGCGGCTTTTG TTGTTGGGTGTTATT TERM 808 1264454 - 1264484 + F 100 -24.8 -4.91084 | opp_overlap 1264446 1264445, overlap 1264449 CGAGAACCGTCAAGG GCCGCTCCGATCCG TCA CGGATCGGGGCGGC TTTTGTTGTTGGGTG SRU_0990 1264603 - 1265166 + | TRAP transporter, DctQ-like membrane protein TERM 809 1265552 - 1265562 + G 76 -2.4 -4.89233 | overlap 1265519 CGAACTTCATCCTCC TGGC GGT GCCC TTTTTCATCTTCATG SRU_0991 1265353 - 1266699 + | TRAP transporter DctM family protein SRU_0992 1268415 - 1266718 - | hypothetical protein TERM 810 1268729 - 1268695 - H 74 -5.7 -4.48072 | gap 1 ACACGTACGACAAAA TCAATGCGCCGGTGTC TTTC GAG-CCGGCGAATCGA TCCCAATTCATTGAG SRU_0993 1269068 - 1269910 + | hypothetical protein TERM 811 1270132 - 1270152 + F 72 -3.9 -4.57569 | overlap 1270127 1270136 CCTGAATACCGTGTA CGGCGAG CGTCGTA CTCTCCG TTTTTCCACCCCTCC SRU_0995 1270179 - 1270823 + | NAD-dependent epimerase/dehydratase family protein SRU_0994 1271737 - 1270820 - | putative deacetylase sulfotransferase SRU_0996 1272561 - 1271668 - | hypothetical protein TERM 812 1273324 - 1273375 + G 71 -9.3 -3.79419 | gap 1, overlap 1273310 1273322 1273327 GCATGGGGGAGCCTC CTGTTTGCGGGCGCCCTGGCCCTC CAATT GCGGGCCAAG-CACCCGCAGATCG TCTTTTATACGGGAA TERM 813 1274275 - 1274289 + G 73 -3.5 -4.59773 | overlap 1274268 1274274 TTCTCGACGGACGCG CAGCG CACCC TGCTG TTTTTGGCGCTGGCG TERM 814 1274515 - 1274530 + G 70 -8.2 -3.90112 | GAGGCCGGGGGGCTG GGGCGC TTTC GCGTCC TTTCGTTGGCGGAGG SRU_0997 1272622 - 1275306 + | hypothetical protein SRU_0998 1275465 - 1276667 + | hypothetical protein TERM 815 1277177 - 1277199 + G 79 -2.7 -5.00616 | CGGCTGCTCCGGAGC TACCTGTAC CGGCC GTACGAGTA TTTTTTGACCCGAAA TERM 816 1277920 - 1277906 - g 75 -11.4 -3.71848 | CTGCTGGAGGAAGAA CTCGCG CTC CGCGAG GTGAGCTACACCTAT SRU_0999 1276907 - 1278625 + | ATP-binding protein of ABC transporter SRU_1000 1278671 - 1279510 + | putative sulfotransferase protein rfbQ 1280520 - 1279576 - | rhamnosyl transferase SRU_1003 1280800 - 1281858 + | glycosyl transferase, group 1 family protein, putative SRU_1002 1282817 - 1281855 - | sulfotransferase domain-containing protein TERM 817 1282429 - 1282447 + g 73 -6.6 -4.3739 | overlap 1282430 GACAGCCACTCGATG TGCCGCAC GTA GTGAGGCG TTTTGTCGCCCCATC SRU_1004 1283850 - 1282858 - | putative sulfotransferase protein TERM 818 1283942 - 1283956 + H 74 -5.6 -4.46212 | opp_overlap 1283942 CAGAGGATGGGAACA GCTGTG GAC CACCGC TTTTGTCCTACAGAG SRU_1005 1284744 - 1285817 + | DHH domain-containing protein pdxA 1285887 - 1287095 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 819 1287692 - 1287647 - g 75 -13.1 -3.35679 | GGGCCTCAGTCACAA GCACCGCAGCTATCCCCACGA GCTG TCGGGGGGCGAGCAGCAGCGC GTCGTCATCGCGCGG ftsE 1287126 - 1287929 + | cell-division ATP-binding protein SRU_1008 1288224 - 1289063 + | hypothetical protein SRU_1009 1289737 - 1289126 - | hypothetical protein TERM 820 1289503 - 1289531 + g 76 -6.5 -4.55798 | overlap 1289518 TTTTCAGGTGGGTGT GAAGGCGTTGCGC CAG GCGTTCCGCCTCC TTTTCGTTTGGGATG SRU_1010 1290315 - 1290638 + | hypothetical protein SRU_1011 1290888 - 1292258 + | intracellular alkaline serine proteinase SRU_1012 1293117 - 1292599 - | hypothetical protein hemB 1294234 - 1293212 - | delta-aminolevulinic acid dehydratase cysS 1296036 - 1294327 - | cysteinyl-tRNA synthetase SRU_1015 1296393 - 1296037 - | ArsR family transcriptional regulator SRU_1016 1297150 - 1296386 - | hypothetical protein TERM 821 1297015 - 1297001 - G 81 -11.4 -4.02571 | overlap 1296998 GAACTGAGTAAAGAA CCGGAC CTG GTCCGG AGAGCGAGGCGGGCC SRU_1017 1297591 - 1297220 - | hypothetical protein TERM 822 1297862 - 1297879 + G 75 -4.8 -4.62069 | overlap 1297852 AGGCCCGTCTCGACT GCGACG GCGACA CGTTGC TTTTTCGGGTGCACC SRU_1018 1297627 - 1298010 + | phosphoribosyl-AMP cyclohydrolase domain-containing protein SRU_1019 1299449 - 1298013 - | proline permease ^, putative SRU_1020 1300132 - 1299662 - | RNA methylase family protein SRU_1021 1301694 - 1300333 - | amino acid permease family protein TERM 823 1300592 - 1300576 - G 70 -2.2 -4.59773 | gap 1, overlap 1300578 1300585 GGCCAGCCCGAAAAA CAGCCAG AACA CCGGC-G CCGTGTAGTCCACCA SRU_1022 1301960 - 1302454 + | mitochondrial benzodiazepine receptor/sensory transduction protein SRU_1023 1304004 - 1302475 - | NAD-dependent epimerase/dehydratase family protein SRU_1024 1304529 - 1305173 + | hypothetical protein SRU_1025 1305243 - 1306172 + | hypothetical protein SRU_1026 1306357 - 1307532 + | peptidase, M50 family protein pykA 1307678 - 1309108 + | pyruvate kinase TERM 824 1309891 - 1309839 - g 100 -20.5 -3.40403 | overlap 1309885 CGTGCGGCAGGAGAA CTGGGAGGCGGCCGATCAGGCCCTG GCC CAGGGCCTGAACGACAACCTGCCGG ACGAGACGGGCGCCC TERM 825 1310665 - 1310688 + G 74 -12.4 -3.53811 | opp_overlap 1310649 CCCGCCGTCCAGACG CAGGGGGCCG ACGC CGGCTTCCTG TTTCACCGCGATCCG SRU_1028 1309234 - 1312206 + | TPR repeat-containing protein TERM 826 1312701 - 1312671 - g 71 -12.4 -3.32844 | opp_overlap 1312677 1312689 CCTGCGACGCCACAA CGAGGCCGCGACGG GGA CGGGCACGGCCCCG GTCACGTTTGCGGCC ftsH 1312243 - 1314303 + | cell division protein FtsH TERM 827 1314423 - 1314445 + F 86 -6.3 -5.07486 | GCCTTGGAACAGTTA GGCAAGC ACAGTTGCG GCTTGCC TTTTTCTTAGCCCTC TERM 828 1314652 - 1314619 - f 76 -10.4 -3.92373 | GACGGTAGTTAGAAA GTGTGCATACTTGA GAACGG TCAAGTACGCACCC GTGACGTCCCTCCGA rpsL 1314697 - 1315071 + | 30S ribosomal protein S12 TERM 829 1315351 - 1315325 - g 77 -12.2 -3.62522 | GAAGGCCGTGAACAA CGCCGCTCCTCT CGT AGAGGTGCGGAG CCGCCGCGTGGGCGG TERM 830 1315483 - 1315465 - g 72 -4.4 -4.5442 | CCCGGAACGAGAAAA GCATGGTG AAT CGCCTTGC GAGTGAGCTGGTCGA rpsG 1315119 - 1315592 + | 30S ribosomal protein S7 fusA 1315666 - 1317786 + | translation elongation factor G TERM 831 1318245 - 1318273 + G 78 -15.3 -3.13403 | overlap 1318244 GCACATTCTTTTGGC CCGTCAGGTGGGG GTG CCCTACCTGGTGG TGTTCATGAACAAGA tuf 1317874 - 1319064 + | elongation factor Tu rpsJ 1319147 - 1319458 + | ribosomal protein S10 rplC 1319991 - 1320617 + | 50S ribosomal protein L3 rplD 1320691 - 1321338 + | ribosomal protein L4/L1 family protein rplW 1321395 - 1321694 + | ribosomal protein L23 rplB 1321747 - 1322598 + | 50S ribosomal protein L2 rpsS 1322674 - 1322967 + | ribosomal protein S19 rplV 1323056 - 1323421 + | ribosomal protein L22 TERM 832 1323590 - 1323576 - g 77 -10 -3.96892 | AACTTCCAGGACAAA CTCGTC GAG GACGAG GAACTGCGCCGCTAC rpsC 1323483 - 1324193 + | 30S ribosomal protein S3 rplP 1324254 - 1324691 + | 50S ribosomal protein L16 rpmC 1324700 - 1324948 + | ribosomal protein L29 SRU_1044 1325009 - 1325317 + | 30S ribosomal protein S17 TERM 833 1325353 - 1325367 + F 73 -7 -4.27316 | GGCCCGGACCCTTCC GGCCCC CAT GTGGCC TTTTCACTTCGAACA rplN 1325402 - 1325770 + | ribosomal protein L14 rplX 1325860 - 1326195 + | ribosomal protein L24 rplE 1326329 - 1326904 + | 50S ribosomal protein L5 rpS 1326979 - 1327248 + | ribosomal protein S14 rpsH 1327342 - 1327743 + | ribosomal protein S8 rplF 1327811 - 1328365 + | ribosomal protein L6 TERM 834 1328378 - 1328405 + F 72 -13.4 -2.75064 | gap 1, overlap 1328376 TAGTCCCTTCTCTTC GGTCGTGCCCCGC ATT GTGGGGC-CGGCC TGCTTCCATCGAACG rplR 1328441 - 1328800 + | ribosomal protein L18 TERM 835 1328935 - 1328904 - g 76 -8.6 -4.2679 | GAAGCGGCAGGAAAA CTGGGTGGACCGAC TCGT GTCGGTCAACCGGG TCTCGAAGGTCGTGA rpsE 1328851 - 1329378 + | ribosomal protein S5 rplO 1329478 - 1329978 + | ribosomal protein L15 secY 1330035 - 1331366 + | preprotein translocase subunit SecY map 1331439 - 1332263 + | methionine aminopeptidase, type I infA 1332263 - 1332484 + | translation initiation factor IF-1 rpsM 1332573 - 1332956 + | 30S ribosomal protein S13 SRU_1058 1332972 - 1333448 + | 30S ribosomal protein S11 TERM 836 1333641 - 1333589 - g 100 -9.8 -5.26875 | gap 1 GTCCGAAGCAAAAAA TCGC-CCGACGCTTCAAGGAGCCCA TCTT TGGGCCCTCCAAGGCGTTGGAGCGA AAGCCATACCCGCCC rpsD 1333558 - 1334160 + | 30S ribosomal protein S4 rpoA 1334278 - 1335243 + | DNA-directed RNA polymerase subunit alpha TERM 837 1335378 - 1335356 - g 95 -5.4 -5.46129 | overlap 1335359 CAAGAAAGGAAAAAA GATCGGGCGC ACG GCGTCCCACC GCAAGCGCACCCTGC rplQ 1335330 - 1335923 + | 50S ribosomal protein L17 TERM 838 1335960 - 1335984 + F 93 -13.6 -4.16943 | opp_overlap 1335959 1335955 TTCTGGACAACGCAG GGCGTCGTGA GTCGA TCACGGCGCC TTTTGCCATGTGGGG spoT 1336119 - 1338359 + | RelA/SpoT family protein hup 1338399 - 1338779 + | DNA-binding protein HU SRU_1064 1338851 - 1339282 + | hypothetical protein SRU_1065 1340341 - 1339301 - | hypothetical protein SRU_1066 1340906 - 1340367 - | HIT domain-containing protein SRU_1067 1341070 - 1341903 + | hypothetical protein ribE 1341951 - 1342421 + | 6,7-dimethyl-8-ribityllumazine synthase TERM 839 1342771 - 1342794 + T 100 -13.8 -5.19879 | TCTGCTTGTCCTAGG GCCCCGGACG TATG CTTCCGGGGC TTTTTCTGTTTGGAC SRU_1071 1343969 - 1342818 - | hypothetical protein SRU_1072 1344295 - 1344014 - | hypothetical protein comF 1344415 - 1345134 + | competence protein F msrA 1345847 - 1345191 - | methionine-S-sulfoxide reductase TERM 840 1345844 - 1345864 + g 72 -6.7 -4.19238 | opp_overlap 1345835 1345832, overlap 1345835 AGAGCAGTGTGGATG GCACACTCG TTA CGAGCGGGC TTTTGGGATTCACGG ndk 1346023 - 1346451 + | nucleoside diphosphate kinase SRU_1076 1346517 - 1347767 + | hypothetical protein SRU_1077 1348124 - 1347768 - | hypothetical protein dacB 1348178 - 1349611 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase SRU_1079 1349658 - 1350125 + | hypothetical protein dapA 1351076 - 1350168 - | dihydrodipicolinate synthase dapB 1351843 - 1351133 - | dihydrodipicolinate reductase TERM 841 1351226 - 1351177 - G 82 -11.4 -4.11216 | gap 3, opp_overlap 1351216 1351220, overlap 1351178 1351216 CGTCCAGCGTGAAAA GGCCGC-GACGC-CCGCGGAGCCAC TCG GCGGC-CCGCAGAACGCCCGCGGCA AACCCGCGTCGGTTC TERM 842 1351225 - 1351178 - G 74 -14.9 -3.06515 | gap 3, opp_overlap 1351216 1351220, overlap 1351177 1351216 GTCCAGCGTGAAAAG GCCGC-GACGC-CCGCGGAGCCAC TCG GCGGC-CCGCAGAACGCCCGCGGC AAACCCGCGTCGGTT TERM 843 1352186 - 1352237 + H 100 -7.2 -5.626 | gap 1, overlap 1352188 CCGTGGCTCCACTTT TGGGTGCCCT-GAGCCGTGACCC TCCCCCC GCCCCGCGGCTCTGGGGCACCTA TTTTTTTGTCCAATC TERM 844 1352188 - 1352235 + H 81 -7.6 -4.45201 | gap 1, overlap 1352186 GTGGCTCCACTTTTG GGTGCCCT-GAGCCGTGACCC TCCCCCC GCCCCGCGGCTCTGGGGCACC TATTTTTTTGTCCAA phrB 1352336 - 1353727 + | deoxyribodipyrimidine photolyase TERM 845 1354195 - 1354238 + T 100 -8.2 -5.95539 | gap 2, opp_overlap 1354195 GGAACGCCGCTTAAA GCCTGC-TCGACAGC-GCCC TCCCCC GCCCAGCTGTCGATGCAGGC TTTTTTTGTTTGGGG TERM 846 1354330 - 1354348 + T 78 -12.4 -3.71848 | ACACGGGGCCTCCGT TCCCGGCG CCG CGCTGGGA TTCTTCGTGGGGGGC TERM 847 1354949 - 1354965 + T 73 -6.5 -4.3586 | overlap 1354940 AAGATATGCGTCGTC CGCGG AGGCGAC CCGCG TTTTGGTCTGCATGA SRU_1084 1357002 - 1355593 - | hypothetical protein TERM 848 1355815 - 1355826 + g 77 -7.2 -4.53303 | overlap 1355812 1355811 GTTCACAGAGTGGGG CCGG TGGC CCGG TTTTGTCTCCCGCTC TERM 849 1356358 - 1356334 - G 74 -2.1 -4.72272 | gap 1 TCCCGTCAGCAAAAA TGCCCCGGTC CCGCAC GATC-GGGCA AAGTCCTTCCGGATC TERM 850 1356875 - 1356911 + g 77 -7.8 -4.36595 | gap 1 GCCTGTGCCGCATAC GCACCCG-GTGCCCGGC ACTG GCCTGCCGCGCGGGGGC TTTTCGGTTTGAATC SRU_1085 1357778 - 1357116 - | hypothetical protein TERM 851 1357333 - 1357370 + g 77 -13.4 -3.53012 | gap 1, opp_overlap 1357316 1357344 1357346 1357355 AGTCCGGTCTCCGAG GCCGCCCAGAAGAGGGC CAAAA GCCC-CTTCGCGGCGGC TTTCAGCCCGCCCCC TERM 852 1359261 - 1359237 - g 73 -12.8 -3.38812 | overlap 1359222 1359235 GGCCTCGGAAGAAGA CCCCGCCGGC GGAGG ACCGGCGGAG TAGCAGCGCTCCCTC SRU_1086 1357855 - 1359264 + | hypothetical protein TERM 853 1359565 - 1359530 - T 74 -9.6 -3.92542 | gap 1, overlap 1359527 CGGATTGCGAAAGAA CGC-GTGGACGAGTCCG ATT CGGACCAGCCCGCAGCG GAAGAAGTGCGACAA SRU_1087 1361364 - 1360489 - | cupin domain-containing protein TERM 854 1361654 - 1361612 - H 79 -9.7 -4.24002 | opp_overlap 1361612 1361616, overlap 1361604 1361617 CGCGAAAGGGCAAAA GGAAAGCCCCTGAGCCGCC ATGGG GGCGATTCAGGGGCGTACG TTGTGGAGATGCCGG TERM 855 1361616 - 1361650 + H 71 -13.5 -2.59748 | opp_overlap 1361604 1361612 1361617, overlap 1361612 AAAGGGCAAAAGGAA AGCCCCTGAGCCGCC ATGGG GGCGATTCAGGGGCG TACGTTGTGGAGATG TERM 856 1361649 - 1361617 - H 100 -17 -4.21408 | opp_overlap 1361616 1361612, overlap 1361604 1361612 AAGGGCAAAAGGAAA GCCCCTGAGCCGCC ATGGG GGCGATTCAGGGGC GTACGTTGTGGAGAT TERM 857 1362534 - 1362512 - g 79 -2.6 -4.99043 | overlap 1362513 GTCCCAGAAAGAAAA GCTCGACTTC GAG GAGATCGAGG CGCTTGAAGAGGTCG SRU_1088 1361835 - 1363082 + | Phage integrase family protein TERM 858 1363870 - 1363860 - T 76 -6.8 -4.4009 | opp_overlap 1363862, overlap 1363862 GCCCACCTTAGAAAA CACG GCC CGTG CTAAAAAACACTGGA SRU_1089 1369820 - 1369446 - | hypothetical protein SRU_1090 1371702 - 1371436 - | RhoA-specific guanine exchange factor SRU_1091 1372512 - 1371754 - | hypothetical protein SRU_1092 1372850 - 1372623 - | hypothetical protein TERM 859 1373801 - 1373775 - R 100 -12.2 -5.0133 | opp_overlap 1373775 TAGCTTTTGAAAAAA GGAACCCGCCAC TCT GCGGCAGGCCCC TGATCTGGAGTGCTC SRU_1093 1374165 - 1373830 - | hypothetical protein SRU_1094 1374952 - 1374242 - | hypothetical protein SRU_1095 1375487 - 1375077 - | hypothetical protein SRU_1096 1376125 - 1375550 - | antirestriction protein TERM 860 1376193 - 1376173 - H 78 -3.2 -4.99035 | overlap 1376174 TCAGGCATAGAAAAA CCCGCC CTCCGTTTT GGCAGG AGTGGCGGCAACAGG TERM 861 1376932 - 1376955 + H 84 -11 -4.14977 | overlap 1376903 GCGGATAGCGTCGCG GACATGGCCG TATT CGGCCATCTC TTCTTTCTCGTCTTC TERM 862 1379239 - 1379265 + H 91 -15.9 -3.86372 | opp_overlap 1379237 1379235 ATCGATAGATACAGT GGGCCTCGGCT AGATC AGCCGAGGCTC TTCTGTTTGAGTTGA TERM 863 1380078 - 1380067 - H 84 -2.2 -5.31275 | TCCGATGAGAAAAAA GAAG GCCT CTCC ACCGTCAGTCAGGTC SRU_1097 1380283 - 1380549 + | hypothetical protein SRU_1098 1380683 - 1382251 + | putative type i restriction enzyme hindviip m protein SRU_1099 1382294 - 1383520 + | type I restriction-modification system, S subunit, putative SRU_1100 1383558 - 1384331 + | RDD family protein SRU_1101 1384371 - 1385399 + | hypothetical protein TERM 864 1385663 - 1385684 + G 72 -4.3 -4.56597 | GGACACGGAGGTCGT CCACCGG CCCACGCT CCGGCGG TTTTTCCGGGCACAA TERM 865 1386016 - 1386005 - g 77 -5.8 -4.62069 | CTTCGAGCTGAAAAA TCCC TACC GGGA GGACGTAGATGTCGA TERM 866 1387854 - 1387841 - g 73 -3.8 -4.57569 | overlap 1387847 1387848 CGACTTCCTCAAAAA GGAG AAGCGG CTCC GGAAGGCCCACAGCC SRU_1102 1385496 - 1388645 + | hypothetical protein SRU_1103 1389684 - 1390334 + | hypothetical protein TERM 867 1391723 - 1391735 + F 80 -4.8 -4.91109 | overlap 1391711 TCAACAATCGGACTA TGCC TGATT GGCA TTTTTCTACTAACGG TERM 868 1392632 - 1392619 - f 74 -2.3 -4.90525 | opp_overlap 1392620, overlap 1392620 GAAGCTGAAAGAAAA CGGCT CCAG AGCCT TTGGCGGCTCCGACG SRU_1104 1392650 - 1392748 + | hypothetical protein TERM 869 1393117 - 1393143 + G 72 -8.6 -4.0896 | CTCAACCTTGTAGCC GGCCTCGATCCG GGG CCGCTTGAGGCC TTTTCAACCGACTTT SRU_1105 1392772 - 1393353 + | transposase, degenerate TERM 870 1393740 - 1393756 + F 83 -7.3 -4.56597 | opp_overlap 1393739, overlap 1393741 TGATAGCTCATAAGC TTTGGAG TGT CTCCAAG TTTTTGCGGAGACGA TERM 871 1394460 - 1394470 + F 73 -6.8 -4.38712 | CTTCGGAAGCGGCTT CCAG GAA CTGG TTTTCTCCAACTCGC SRU_1107 1394575 - 1394697 + | hypothetical protein SRU_1108 1395142 - 1394840 - | hypothetical protein TERM 872 1395079 - 1395089 + g 85 -5.4 -5.04733 | TATTGGAGCGGGCCT CTTC TGA GAAG TTTTCTTTATACTTA TERM 873 1395455 - 1395435 - R 77 -3.9 -4.82901 | GGCCTGTTAGAAAAA CGGTCGG AGACGGA CAGACCG AACGGTCTACAGGAC TERM 874 1396786 - 1396756 - R 71 -5.5 -4.27584 | gap 1 ACCGCCAAGCCAAAA GCTTCAG-CGACTT CTGG AAGCCCCCTGAAGC GACAGCTTCTCCCAG SRU_1109 1398658 - 1397735 - | ribonuclease H SRU_1110 1401115 - 1399001 - | hypothetical protein TERM 875 1401537 - 1401523 - H 73 -2.8 -4.68908 | overlap 1401525 GGCATTGAAAAGAAA TGCTTC CGG GAAGTA GAGAAGTGGGGCATA TERM 876 1401787 - 1401812 + H 83 -14.7 -3.53012 | opp_overlap 1401787 AAGCCAAAAAGAAAA CCCCGTAAGCC GTTG GGCCTACGGGG TTTAGGGAGAGAGCG TERM 877 1401812 - 1401787 - H 100 -16.9 -5.29885 | opp_overlap 1401787 AAGCCAAAAAGAAAA CCCCGTAAGCC GTTG GGCCTACGGGG TTTAGGGAGAGAGCG SRU_1112 1402396 - 1403241 + | MazG family protein SRU_1113 1403335 - 1403937 + | hypothetical protein SRU_1114 1404029 - 1404433 + | hypothetical protein SRU_1115 1405018 - 1404491 - | hypothetical protein TERM 878 1405125 - 1405154 + H 80 -14.9 -3.1637 | opp_overlap 1405128 GGCGATGATCAATAG GAACGGCACGCGG CCGG CCGCGTGCCGCCC TTCCTCCGCGTGTAT TERM 879 1405151 - 1405128 - H 100 -19.6 -3.40163 | opp_overlap 1405125 GATGATCAATAGGAA CGGCACGCGG CCGG CCGCGTGCCG CCCTTCCTCCGCGTG TERM 880 1406302 - 1406263 - g 88 -16.4 -3.68222 | gap 1 CGCCAAGCGCAACAA CTGCCAGACCGCCCTGGAC GTG GCCC-GGTCGGCCCGGCAG GTGCTGGGGGGGAAC SRU_1116 1405253 - 1406449 + | acyl-CoA dehydrogenase domain-containing protein SRU_1117 1406761 - 1407279 + | starvation induced DNA binding protein TERM 881 1407325 - 1407353 + F 100 -19.6 -4.99035 | opp_overlap 1407314 CGAACACACGCACGA GCCCGGTGTCGG CCTGT CCGGCACCGGGC TTTTTGTGTGCGTGG TERM 882 1407417 - 1407388 - f 85 -15.7 -3.48276 | CGTGTGGGGACACAA CGACCCGGCCGAG GGGG CTCATCCGGGTCG CCGTGCCGGATTCAA topA 1407572 - 1410160 + | DNA topoisomerase I rsgA 1411210 - 1410236 - | ribosome-associated GTPase TERM 883 1411586 - 1411642 + Gr 91 -11.9 -4.18018 | opp_overlap 1411580 CCCGAAGGACGGAGG GGCGTCCGCCGACGCGGACGCCTAGCC CCG GGCAGAGGGCCCGTGGCAGCAGACGCC TTTTCCATCGACACG SRU_1120 1411924 - 1411607 - | hypothetical protein SRU_1121 1411511 - 1411909 + | hypothetical protein SRU_1122 1413906 - 1412101 - | FixL-related histidine kinase SRU_1123 1415648 - 1414131 - | cystathionine beta-synthase SRU_1124 1416929 - 1415697 - | hypothetical protein SRU_1125 1416928 - 1418106 + | succinyl-CoA synthetase beta chain SRU_1126 1419054 - 1418131 - | hypothetical protein TERM 884 1420000 - 1419986 - g 77 -3.4 -4.9218 | GACCGACGATAAAAA GGGGAC CGA GCCGCC CGAGAAGACGAGGGA SRU_1127 1419624 - 1420019 + | IS5 family transposase SRU_1128 1420801 - 1422093 + | amidohydrolase TERM 885 1423150 - 1423140 - g 72 -8.2 -4.08767 | opp_overlap 1423140 1423141, overlap 1423141 CCTACGTGCCGAAAA CGCG CAT CGCG CTTTACGAGGCGGCC SRU_1129 1422086 - 1423375 + | amidohydrolase family protein SRU_1130 1424462 - 1423404 - | 4'-phosphopantetheinyl transferase superfamily protein TERM 886 1424233 - 1424216 - G 70 -8.4 -3.91084 | overlap 1424218 GCAGGTGGAATGAAA GAGGCC CGCGAC GGCCTC GTCGGCGGCCTGCAG SRU_1132 1426104 - 1424689 - | hypothetical protein SRU_1133 1427409 - 1426204 - | lysine 2,3-aminomutase YodO family protein SRU_1134 1427632 - 1427850 + | hypothetical protein SRU_1135 1429104 - 1428220 - | D-alanine--D-alanine ligase superfamily protein TERM 887 1428828 - 1428791 - G 76 -8.5 -4.20042 | gap 2 ACGAACAGGGGAAAA GCGCCCGGAAGGTCGTC TGCGTC GACGG-CTTC-GGGCGC GCTGTAAACCCGATG TERM 888 1429351 - 1429301 - H 74 -11.9 -3.53012 | gap 1 GCGGGCGTCGTGAAA CGTGAAGCGTGATGCGTGA-GGAA TCGT CCCCGTCACGCGTCACGAGTCACG GCTCACCCGAATAGC SRU_1136 1429488 - 1429802 + | hypothetical protein SRU_1137 1429929 - 1431542 + | Na(+)/H(+) antiporter family protein ppsA 1434069 - 1431595 - | phosphoenolpyruvate synthase ahcY 1434546 - 1435823 + | S-adenosyl-L-homocysteine hydrolase TERM 889 1435872 - 1435907 + F 100 -24.1 -5.5604 | opp_overlap 1435828 GTCGCTGATGCCTGC GCCGCTTCGCCCCGA CATTGT TCGGGGCGGAGCGGC TTTTTTATTGGTTGC SRU_1140 1436161 - 1436442 + | hypothetical protein TERM 890 1436520 - 1436502 - f 70 -11.6 -3.23853 | overlap 1436484 1436500 GGCCGCCAACGAACA GCACCGCC GAT GGCGGAGC GGAAGCGCCGGACGT TERM 891 1437019 - 1437002 - g 70 -2.6 -4.59773 | overlap 1437004 1437007 GTCGATGTGCAAAAA GAGCAC GGCGCG GTGCGC CACTACATCGACGAC SRU_1141 1436753 - 1437535 + | alanyl-tRNA synthetase TERM 892 1438322 - 1438308 - g 72 -11.4 -3.56092 | CGATGATCGGGGAAA CGGTCG TCG CGACCG GGGCCGAGGGCGGGC SRU_1142 1437602 - 1438384 + | GHMP kinases putative ATP-binding protein TERM 893 1439311 - 1439285 - g 74 -10 -3.84451 | overlap 1439286 1439288 GGTGCTAAAGGTAAA GCAGCCCGACGG CTC CCTTCGGGCCGA TACGCTAACGGTGCG SRU_1143 1438503 - 1440524 + | penicillin amidase superfamily protein SRU_1144 1440651 - 1441127 + | hypothetical protein SRU_1145 1441514 - 1441170 - | ferredoxin-1 TERM 894 1441665 - 1441709 + r 70 -10.6 -3.65529 | overlap 1441669 TGAGTCTTGTCCGTG TCGTCCGCCTTTCGTCCCGT GCCCG ACGGGACGGATGGCCGTTGG TTTCGATCGAGCTAT TERM 895 1441669 - 1441705 + r 85 -14.4 -3.54408 | overlap 1441665 TCTTGTCCGTGTCGT CCGCCTTTCGTCCCGT GCCCG ACGGGACGGATGGCCG TTGGTTTCGATCGAG ruvB 1442755 - 1441721 - | Holliday junction DNA helicase B TERM 896 1441876 - 1441898 + g 74 -5.4 -4.57073 | overlap 1441876 CGAGCGTGCCGGACT CTTCGCCGAC GGA GACGGCCAGG TTTTTGAGGCCGGTG TERM 897 1442936 - 1442921 - H 75 -3.2 -4.91109 | opp_overlap 1442921, overlap 1442922 GTCTCAGTAGAAAAA GTCCGA ACAA TCGGAA TGAATTTTGCTATGA rpoN 1443048 - 1444562 + | RNA polymerase sigma-54 factor SRU_1148 1445402 - 1444605 - | hypothetical protein SRU_1149 1445566 - 1447080 + | aminotransferase fus 1449218 - 1447095 - | elongation factor G SRU_1151 1449505 - 1449996 + | hypothetical protein SRU_1152 1450000 - 1450635 + | hypothetical protein fabG 1450788 - 1451609 + | 3-ketoacyl-(acyl-carrier-protein) reductase SRU_1154 1451652 - 1452353 + | glycoprotease (M22) metalloprotease accD 1452467 - 1453315 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 898 1453754 - 1453771 + G 70 -11.3 -3.57462 | opp_overlap 1453768 ACGCCCACCGGCTCG GCCGTTC AGAT GAACGGC TTTAGCCGTGCCCTC SRU_1156 1453601 - 1456054 + | hypothetical protein SRU_1157 1456175 - 1457215 + | surface antigen, putative TERM 899 1457713 - 1457737 + G 73 -11.3 -3.63627 | CCGCGCCTACCGGAA CGTCGGCTCGG CCA CGGCGCCGACG TTTGAGCTGTACGCC TERM 900 1458438 - 1458420 - g 85 -6.6 -4.86731 | TCGTGGCAAACAAAA TCGACCCG ACC CAGGGCGA GACTTCTCTGGTGTA SRU_1158 1457246 - 1459105 + | FG-GAP repeat-containing protein SRU_1159 1459599 - 1459132 - | hypothetical protein TERM 901 1459839 - 1459829 - H 71 -8.2 -3.90744 | CTTCCCTGCAAACAA CCGC GAT GCGG ACATGACGGAGGTCC uvrB 1459842 - 1461917 + | excinuclease ABC subunit B SRU_1161 1463219 - 1461993 - | cystathionine beta-lyase MetC TERM 902 1462918 - 1462902 - G 81 -5.7 -4.84311 | GTCGAGACAAGAAAA GAGGCGC TCG GTGCCCC CGTAGCAGTCGTGCG TERM 903 1463271 - 1463227 - H 78 -5 -4.77567 | AGGTCCATAAGAAAA GTCGTCTCGGTGAGTGAA GAAGCGGGG TGGCCTCACCAAGACGAC GACAGAGGACCTCAA rpmE 1463613 - 1463867 + | ribosomal protein L31 TERM 904 1463895 - 1463918 + F 100 -11 -4.77757 | opp_overlap 1463890 1463888 1463895 ATTTCAAACAGTGAA GGTCACCTGT GCAA ACGGGTGGCC TTTTCGTTTTTCAGG pyn 1463913 - 1465382 + | pyrimidine-nucleoside phosphorylase TERM 905 1465575 - 1465545 - g 75 -4.7 -4.63932 | gap 1, overlap 1465547 GATTCTCGAACAAAA CATCCGGGAGCTCA ACGA TCAGGTCCCGGA-G ATGAACGAGAACATC TERM 906 1465574 - 1465547 - g 70 -8.4 -3.93367 | overlap 1465545 TTCTCGAACAAAACA TCCGGGAGCTCA ACGA TCAGGTCCCGGA GATGAACGAGAACAT SRU_1164 1465450 - 1466238 + | hypothetical protein SRU_1165 1467499 - 1466309 - | hypothetical protein SRU_1166 1468412 - 1467810 - | hypothetical protein moaC 1468973 - 1468461 - | molybdenum cofactor biosynthesis protein C SRU_1168 1470696 - 1469092 - | amidohydrolase TERM 907 1470659 - 1470618 - G 79 -16.5 -3.05384 | gap 1 CTGCGGGCGAGCCAA CCGCCGCAATCC-GGCCGTC GCG GACGGCCAGGGCCGAGGCGG GGACGGGCCGGTCAG TERM 908 1470918 - 1470933 + H 75 -11.8 -3.65199 | opp_overlap 1470912 GAAAAATAGGCCATT CCGGGC GGCT GCCCGG TTTGAATAGGCAGTT TERM 909 1471237 - 1471274 + G 83 -2.6 -5.24129 | gap 2, overlap 1471240 ATCAAGATGTTGTGT CGGGCCTCGGCGCCGTGG ACTC CTACGGGGTCG-G-CCAG TTTTTTCTCCCAACC gltB 1471008 - 1475552 + | glutamate synthase, large subunit gltD 1475627 - 1477207 + | glutamate synthase dtd 1477669 - 1477217 - | D-tyrosyl-tRNA deacylase rdgB 1478326 - 1477715 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 910 1478636 - 1478612 - R 73 -11.3 -3.65812 | overlap 1478597 GCGGCTCGAAGAGAA GCGGTCCCGCC GCC GGCGCCACCGC CAACGGAAGCGGGGC TERM 911 1478728 - 1478753 + r 100 -18.3 -5.45802 | CCGGCAACGTTGTTG GGGACGGGCCC GAGC GGGTCCGTCCC TTTTTCTTTTGAGAC TERM 912 1478837 - 1478806 - R 84 -16.7 -3.01791 | opp_overlap 1478811, overlap 1478811 AGGGCCCCGTCAACA CAAAAGCCCCACC GCACTG GGTGGGGCTTTCG CTGTTGACAAGAGAG TERM 913 1478832 - 1478811 - R 100 -13 -4.66537 | opp_overlap 1478811, overlap 1478806 CCCGTCAACACAAAA GCCCCACC GCACTG GGTGGGGC TTTCGCTGTTGACAA TERM 914 1478811 - 1478832 + r 81 -13 -3.76373 | opp_overlap 1478811 1478806 CCCGTCAACACAAAA GCCCCACC GCACTG GGTGGGGC TTTCGCTGTTGACAA kgd 1482600 - 1478869 - | alpha-ketoglutarate decarboxylase SRU_1174 1483735 - 1482716 - | NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein SRU_1175 1484789 - 1484028 - | alkaline phosphatase synthesis transcriptional regulatory protein PhoP recO 1485885 - 1486667 + | DNA repair protein RecO lexA 1486777 - 1487427 + | LexA repressor SRU_1178 1487458 - 1488111 + | methyltransferase, putative phrB 1489779 - 1488328 - | deoxyribodipyrimidine photolyase TERM 915 1489243 - 1489285 + g 100 -13.5 -4.96848 | gap 2 GTCTTCAGGCAGGGG GAGCAGCGAGTCCGGCGCGTC CAG GGTGGGCCGGAC-CG-TGCTC TTTTTCTCTACGGCC TERM 916 1490262 - 1490235 - R 100 -12.6 -4.52589 | opp_overlap 1490234, overlap 1490237 1490238 CCGTGTCATACAAAA GAGGCCAGCGGC AATT GCCGCTGGCTGC CTGTCTGTCTGGGGC TERM 917 1490260 - 1490237 - R 86 -13.8 -3.87627 | opp_overlap 1490234, overlap 1490235 1490238 GTGTCATACAAAAGA GGCCAGCGGC AATT GCCGCTGGCT GCCTGTCTGTCTGGG TERM 918 1490259 - 1490238 - R 87 -17.3 -2.92094 | opp_overlap 1490234, overlap 1490237 1490235 TGTCATACAAAAGAG GCCAGCGGC AATT GCCGCTGGC TGCCTGTCTGTCTGG TERM 919 1490379 - 1490412 + r 88 -16.7 -3.35197 | overlap 1490374 1490380 GGCGCGTCATGCGAG ACCCCCGCTTCTGTC TTCA GGCAGGAGCGGGGGA TTGCTATGTATGAGG TERM 920 1490380 - 1490411 + r 90 -20.2 -2.60797 | overlap 1490374 1490379 GCGCGTCATGCGAGA CCCCCGCTTCTGTC TTCA GGCAGGAGCGGGGG ATTGCTATGTATGAG SRU_1181 1491108 - 1490437 - | hypothetical protein SRU_1182 1494279 - 1491148 - | acriflavine resistance protein (cation efflux system) TERM 921 1492967 - 1492953 - G 85 -5.7 -5.08601 | CGAGCGGAAGAAAAA TCACG GAGGT CGTGA TCGTCGAGGCCAGAA SRU_1183 1495650 - 1494328 - | putative membrane efflux protein SRU_1184 1495976 - 1496587 + | hypothetical protein TERM 922 1496620 - 1496635 + T 100 -9 -5.0133 | TTGAGGATTGGGCGT TGCGCA AGTG TGCGCA TTTTTTCCACCCGTG rnhA 1497271 - 1496687 - | RNase H obgE 1497310 - 1498329 + | GTPase ObgE TERM 923 1498855 - 1498899 + GF 73 -12.8 -3.18239 | gap 1, opp_overlap 1498851 CCGCGCACAAGGGCG CGCTCGACGCCGGCGGCCGCA CGGT TGCGGTCCTCGGA-TCGGGCG TTGGTCACATCTATC TERM 924 1499216 - 1499250 + GF 83 -15.1 -3.23692 | gap 1 GCTGGTGATGGAGGT CGACGACCTGCTGGAG GAGC TTCCGGC-GGTCGTCG TTGATGATCCTGATA dprA 1498326 - 1499492 + | DNA processing protein DprA SRU_1188 1499450 - 1500826 + | aminotransferase rluD 1501033 - 1502082 + | ribosomal large subunit pseudouridine synthase D TERM 925 1502161 - 1502151 - f 71 -4.6 -4.41348 | overlap 1502147 TCGCGGGGAAACAAA GGGC CCC ACCC TTTGATACGGCATCG SRU_1190 1502349 - 1502849 + | HNH endonuclease domain-containing protein SRU_1191 1503043 - 1503492 + | hypothetical protein TERM 926 1503555 - 1503501 - T 100 -26.6 -3.41745 | gap 1, opp_overlap 1503542, overlap 1503514 GCGGTAGAATATGAA CCACGAGACAGAAGCGCCGAGCCCC GCGATA GGGACTCGGCGCCTCTG-CGCGTGG AGGTCGCGACGGATC TERM 927 1503543 - 1503514 - T 100 -18.6 -3.63018 | opp_overlap 1503542, overlap 1503501 AACCACGAGACAGAA GCGCCGAGCCCC GCGATA GGGACTCGGCGC CTCTGCGCGTGGAGG SRU_1192 1505278 - 1503584 - | TonB family protein SRU_1193 1505681 - 1505268 - | BlaI/MecI/CopY family transcriptional regulator SRU_1194 1506495 - 1505782 - | glycosyl transferase-related protein TERM 928 1505971 - 1505960 - G 79 -2.2 -5.00616 | overlap 1505966 GCCGCGTCCAAAAAA CGAA ACCT TCCG TGTCCCTGAAGCCGG SRU_1195 1507543 - 1506650 - | amidinotransferase SRU_1196 1508298 - 1507636 - | hypothetical protein SRU_1197 1509434 - 1508490 - | ABC transporter, ATP-binding protein SRU_1198 1510381 - 1509440 - | small conductance mechanosensitive ion channel (MscS) family protein pgk 1511623 - 1510427 - | phosphoglycerate kinase gap 1512719 - 1511715 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 929 1512456 - 1512479 + g 83 -3.8 -5.14563 | gap 1, opp_overlap 1512419, overlap 1512457 GTCGGTGTCGTGGTC G-CCCCACGGA AGG TTCGTCGGGTC TTTTTTGCTGAAGAC TERM 930 1512457 - 1512477 + g 74 -7.5 -4.20707 | opp_overlap 1512419, overlap 1512456 TCGGTGTCGTGGTCG CCCCACGGA AGG TTCGTCGGG TCTTTTTTGCTGAAG TERM 931 1512906 - 1512892 - H 79 -8.5 -4.2535 | AGATCACATGCAAAA CCGGG CCCGC CCCGG GACGGCCTGGTCGCG SRU_1201 1513190 - 1513765 + | TPR repeat-containing protein dctD 1513914 - 1515293 + | C4-dicarboxylate transport transcriptional regulatory protein TERM 932 1515575 - 1515604 + G 77 -13.6 -3.53012 | gap 1, overlap 1515593 CACCTGCTGGGGGCG CTGGACCG-GCCG ACCGA CGGCACGGTCCGG TTTGCCGGGACGGAC SRU_1203 1515329 - 1516144 + | lipoprotein-releasing system ATP-binding protein lolD SRU_1204 1516391 - 1517032 + | ATP-dependent protease La SRU_1205 1517054 - 1517965 + | metallo-beta-lactamase superfamily protein SRU_1206 1518042 - 1518299 + | MCP domain-containing signal transducer TERM 933 1518324 - 1518356 + F 73 -3.4 -4.79451 | gap 2, overlap 1518330 GGAAAGAAACTCGCG GGCGCCGTTCGGCTAC CAA GTAGCCG--TGGCATC TTTTGTGTTTGGAAT SRU_1207 1518764 - 1519843 + | hypothetical protein SRU_1208 1520060 - 1520683 + | transcriptional regulator, TetR family protein TERM 934 1520700 - 1520716 + F 70 -7.9 -4.06055 | GCGCCCTGAGACGCC CTCGGCG TGG TGCCGGG TTTCCTTTCACCGAT fadD 1520747 - 1522645 + | putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase SRU_1210 1522773 - 1525181 + | 3-hydroxyacyl-CoA dehydrogenase atoB 1525298 - 1526503 + | acetyl-CoA acetyltransferase SRU_1212 1526564 - 1527310 + | NAD-dependent epimerase/dehydratase family protein TERM 935 1528654 - 1528693 + G 77 -12.8 -3.65046 | gap 1 GACCGACACGCCGGG CGTCAAGCTG-GGGCGTCG CCA CGACCCCCTCGGCGTGGCG TTCTTCAACTGCCCC TERM 936 1529440 - 1529452 + G 79 -3.3 -5.0133 | GATGGCGTGGGCGTC GGCCA GCT TCGCC TTTTTTGCCGACCTG fadE 1527737 - 1530307 + | acyl-CoA dehydrogenase TERM 937 1531045 - 1531069 + G 77 -16.5 -2.61582 | overlap 1531048 GTTTGGGGAGCCCGA GGAGCTGGCCA CCC TGGCCAGCTTC CTTCTCAGTGACCTG TERM 938 1531048 - 1531066 + G 80 -14.6 -3.45945 | overlap 1531045 TGGGGAGCCCGAGGA GCTGGCCA CCC TGGCCAGC TTCCTTCTCAGTGAC SRU_1214 1530365 - 1531219 + | short chain dehydrogenase/reductase family oxidoreductase TERM 939 1532028 - 1531995 - g 79 -11.6 -3.78775 | gap 1 TCCCGTACCAGGAAA CGCTCCTGCCGGTCG TGAAG CG-CCGGCTGGTGCG GCAACTGGCCGCCGA SRU_1216 1531268 - 1532074 + | hypothetical protein hemG 1533453 - 1532068 - | protoporphyrinogen oxidase SRU_1217 1533686 - 1533886 + | hypothetical protein TERM 940 1533969 - 1533993 + F 100 -15 -5.41787 | opp_overlap 1533968 1533967 1533982 GTCCCATCCACAAGG GCTCGTCCCC AAACC GGGGACGGGC TTTTTGTATTTTTTG TERM 941 1535114 - 1535086 - g 83 -4.6 -5.07486 | gap 1, overlap 1535087 TACGGCTAAGAAAAA CCTCC-GCGCA CAAAAAAT TGCGCTGGAGA ACCATGTGCCCATCA TERM 942 1535800 - 1535842 + G 73 -9.6 -3.9712 | opp_overlap 1535833 GGGGGAAATTCAGGT GGGGGGCGTCGTGTACGCCG ACG CCGCGGACAAGGCGGCCCGC TTTATCATGAACTGC SRU_1218 1534283 - 1536379 + | propionyl-CoA carboxylase, beta subunit, putative SRU_1219 1536844 - 1536401 - | OsmC-like protein SRU_1220 1536925 - 1537602 + | hypothetical protein SRU_1221 1537686 - 1538378 + | hemolysin, putative SRU_1222 1539186 - 1538386 - | metallo-beta-lactamase superfamily protein SRU_1223 1540311 - 1539244 - | polyprenyl synthetase SRU_1224 1541437 - 1540436 - | hemin ABC transporter, permease protein, putative TERM 943 1540511 - 1540481 - G 77 -3.9 -4.78107 | gap 1, opp_overlap 1540505, overlap 1540482 CAGCACCAGGAAAAA GGGCA-CCCCACAG AGGG CGGTGAGGATGCCT ACGGGCAACTCCTGT TERM 944 1541159 - 1541138 - G 79 -11.5 -3.8211 | GCCGAGGTAGAAGAA CGACGCCCC GGCC GAGGCGCCG CTGGAGATGCCCAAG SRU_1225 1542510 - 1541458 - | periplasmic binding protein, putative rrp 1542510 - 1544081 + | response regulatory protein SRU_1227 1543999 - 1545102 + | deoxyribose-phosphate aldolase TERM 945 1545507 - 1545488 - gf 72 -4.8 -4.46615 | overlap 1545482 1545490 GATGATCAAGGAAAA GTCCCGCG AGTT CGCGGTGC TGGAGTCGATGGACG TERM 946 1546321 - 1546365 + GF 81 -5.5 -4.7373 | opp_overlap 1546331 GGTTCCCGCCCACGT TCTTCACCAACGTGACGCAGT CCC ACCGCATCGCGCAGGAGGAGA TTTTTGGTCCCGTCC TERM 947 1546592 - 1546579 - gf 76 -9.5 -3.9941 | GCGGCTACAAGGAAA GCGGC TTCG GCCGC GAGGGGGGCATGCAC SRU_1228 1545153 - 1546742 + | aldehyde dehydrogenase, mitochondrial precursor SRU_1229 1546643 - 1547533 + | aldehyde dehydrogenase (NAD) family protein SRU_1230 1547566 - 1548156 + | hypothetical protein SRU_1231 1549585 - 1548173 - | pyridoxal-dependent decarboxylase family protein, putative TERM 948 1548895 - 1548881 - G 71 -2.7 -4.60487 | overlap 1548882 CAGCAGCCGGAAAAA GCCGC CGTAC GCGCC ATCGACGTGAACCCG SRU_1232 1550858 - 1549632 - | glycine oxidase, putative TERM 949 1550481 - 1550465 - GH 76 -5.8 -4.56597 | gap 1, opp_overlap 1550437, overlap 1550466 1550467 CGGTGTCGGGAAAAA GCGCCGG GGCA CCGGC-C TCGTCTAGGAGCGTC TERM 950 1550851 - 1550818 - Gg 77 -10.3 -3.90744 | overlap 1550841 CTGCGTTGCAAACAA GGCCGACACTCTTCT GCAC AGAAGAGTCCCGGAC ACTCCACTGGATGCG thiO 1550758 - 1552029 + | glycine oxidase ThiO thiS 1552026 - 1552268 + | thiamine biosynthesis protein ThiS thiG 1552317 - 1553138 + | thiazole synthase TERM 951 1553162 - 1553150 - f 80 -6.2 -4.81212 | opp_overlap 1553157, overlap 1553151 GTGACGAGAAGAAAA GGGG GAGCT CCCC GGCCTCTCCTGGGGG SRU_1236 1553494 - 1554126 + | thiamine-phosphate pyrophosphorylase thiD 1554175 - 1555047 + | phosphomethylpyrimidine kinase TERM 952 1555222 - 1555247 + F 100 -14 -4.99645 | CTCGGTCTATTGTTT CCCCTCGGTC CCATGC GGCCGAGGGG TTTTCTTTGTCGCCT SRU_1239 1555501 - 1556049 + | putative DNA polymerase III gamma subunit SRU_1240 1556234 - 1556584 + | hypothetical protein TERM 953 1557463 - 1557477 + G 82 -11.4 -4.13767 | GGTCCACGAGTTCAT GCCGGA GCG TCCGGC TTTTGAGATCGGCGG TERM 954 1557602 - 1557631 + G 70 -6.3 -4.1899 | gap 1, overlap 1557604 GCCCTTCGCTCGGCG GTCGTCGTGC-CGC TGG GGGAGCACGGCGTC TTTTCGGTGGGCTCG TERM 955 1558494 - 1558469 - g 75 -3.2 -4.78661 | opp_overlap 1558470 ACCGAAAAAGGAAAA GGCAGCCG ATTCGTCGTG CGGCTTCC GTGCTGCGAGAAGAA SRU_1241 1556762 - 1558552 + | histidine kinase PhoR1 SRU_1242 1559141 - 1558614 - | rhodanese-like domain-containing protein SRU_1243 1559475 - 1559182 - | hypothetical protein SRU_1244 1559788 - 1561239 + | peptidase M16 inactive domain-containing protein TERM 956 1562690 - 1562713 + G 77 -13.2 -3.53224 | GACGAGTCGCACATC CTGATCGTCG GGAA CGGCGATCAG TTTAGCGAGGACCTG ymxG 1561424 - 1563511 + | processing protease TERM 957 1563537 - 1563581 + F 80 -16.5 -2.57881 | gap 1, opp_overlap 1563529 1563526, overlap 1563535 1563543 GAAACGACGAACCGC CACG-AGCGCCCGGGGCTCT CTGCAC GGAGGCCCGGGCGTTTCGTG ATTCTGGGGGACTTC TERM 958 1563543 - 1563574 + F 91 -15.1 -3.86944 | opp_overlap 1563529 1563526, overlap 1563535 1563537 ACGAACCGCCACGAG CGCCCGGGGCTCT CTGCAC GGAGGCCCGGGCG TTTCGTGATTCTGGG TERM 959 1563894 - 1563862 - g 79 -11.9 -3.83026 | overlap 1563864 GTCCCCCAGATGAAA GACGCGGAGGCGG TGTGCAG CCGCCTCCCCGAC CGCGCGGACGTGACG TERM 960 1563892 - 1563864 - g 77 -13.1 -3.5032 | overlap 1563862 CCCCCAGATGAAAGA CGCGGAGGCGG TGTGCAG CCGCCTCCCCG ACCGCGCGGACGTGA SRU_1246 1563682 - 1564605 + | 3-hydroxy-3-methylglutaryl-CoA lyase SRU_1247 1565479 - 1564643 - | phosphoesterase SRU_1248 1566626 - 1565613 - | hypothetical protein SRU_1249 1568288 - 1566699 - | hypothetical protein TERM 961 1567539 - 1567518 - G 70 -10.9 -3.59979 | gap 1 CCGGTTGAGCGCAAA GATGGCGGGG CCG CCCCGC-ATC ACGTACTGGTCCAGG SRU_1250 1569216 - 1568428 - | ABC transporter permease SRU_1251 1570471 - 1569266 - | ABC-type multidrug transport system, ATPase component TERM 962 1570893 - 1570883 - gH 76 -6.8 -4.41494 | overlap 1570888 GATCGTGAATGAAAA CGAC ACC GTCG CCACCGAGGAATTGC TERM 963 1571156 - 1571145 - gH 77 -3.6 -4.83615 | overlap 1571146 GAGGCGGCAGAAAAA GCGA CGGA CCGC GGGATCGATACCGTT proB 1570464 - 1571594 + | gamma-glutamyl kinase proA 1571703 - 1573013 + | gamma-glutamyl phosphate reductase SRU_1254 1573816 - 1573046 - | hypothetical protein TERM 964 1573943 - 1573913 - gR 75 -4.6 -4.62984 | opp_overlap 1573916, overlap 1573914 1573916 CGATCAGAGAGAAAA TCATGCAAGAGAGG ACA CCCCGCTTGCATTT GTGCGCCCGGCGCGT TERM 965 1573916 - 1573940 + Gr 71 -8.5 -3.85698 | opp_overlap 1573916 1573914 1573913 TCAGAGAGAAAATCA TGCAAGAGAGG ACA CCCCGCTTGCA TTTGTGCGCCCGGCG TERM 966 1574015 - 1574034 + Gr 71 -13.6 -2.52464 | TGCACGACGACGTTG TGCCTCGG GGCG CCGAGGCA TAGGTTAAGACCGAC SRU_1255 1573781 - 1575784 + | trk active potasium channel SRU_1256 1576884 - 1575808 - | hypothetical protein TERM 967 1576950 - 1576926 - R 100 -21.5 -4.40605 | opp_overlap 1576913 ACCGACAAAGAGAAA GGGCCGCGAGA CGG TCTCGCGGCCC TCCTGCTGAACGTGT gcvP 1579963 - 1577021 - | glycine dehydrogenase TERM 968 1578001 - 1578017 + g 70 -10.1 -3.65351 | opp_overlap 1577995 ACGTAATCATCGCGG CGGCGAG GCG CTCGCTG TTTACCTCGGCCTGC TERM 969 1579167 - 1579127 - G 77 -13.2 -3.60296 | gap 1 CATCGGCACCCCAAA GCGCTGCGTGGAGCCGACG ACCG CGTCGGCCCCCCACT-CGC CCGGGGCCTCCAGGA TERM 970 1580926 - 1580960 + G 72 -14.2 -3.01712 | GATCGACTGGCTGCG GACGCTCTGTGGCCTC CCA GAGGCCGCAGGGGGGC TGTTCACGAGCGGGG SRU_1258 1580417 - 1581973 + | L-2,4-diaminobutyrate decarboxylase TERM 971 1582875 - 1582890 + G 72 -8.2 -4.12902 | overlap 1582874 GGGCTACGGGGAGGC GGGCGC CGGC GCGCTC TTTTCGGCCTACTTC SRU_1259 1582138 - 1583334 + | D-lactate dehydrogenase, putative dehII 1583437 - 1584126 + | haloacid dehalogenase, type II SRU_1261 1589325 - 1584256 - | hypothetical protein SRU_1262 1591612 - 1589489 - | OMP85 family outer membrane protein yihY 1592941 - 1591832 - | YihY family protein SRU_1264 1595092 - 1593056 - | hypothetical protein TERM 972 1593197 - 1593181 - G 95 -4.3 -5.49809 | GAAACGTGAAAAAAA GCGTCGC GCT GCGAAAC TGTACCTCCGCCCGC SRU_1265 1595877 - 1595218 - | deoxynucleoside kinase subfamily protein TERM 973 1595695 - 1595677 - G 75 -3 -4.8048 | overlap 1595679 CTTGGACAGGAAAAA GACCTGCA GGT TGAAGGAC CACCGGCGCATGTCG TERM 974 1596028 - 1596014 - R 86 -7 -5.00616 | CGGCCCCTGAAAAAA CGTCCC GTC GGGCCG GGCGAATGGGGAGGC SRU_1266 1596584 - 1596072 - | hypothetical protein SRU_1267 1597757 - 1596792 - | aldehyde reductase SRU_1268 1599236 - 1597908 - | class-V aminotransferase TERM 975 1599121 - 1599109 - G 81 -5.5 -4.71186 | AGGACGAAGAGAAAA GACGC TTG ACGTC GGGCCGTACGCGTGC metE 1599300 - 1601609 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 976 1601644 - 1601680 + T 100 -18 -3.81755 | gap 2, opp_overlap 1601645, overlap 1601645 ATTGTCTCCGAGCAG AGGGCGGGC-G-CGCCGC GTT GCGGCGTCAGCCCGCCCG TTCTGTTTGGCCCGT TERM 977 1601679 - 1601645 - T 100 -21.5 -2.78384 | gap 2, opp_overlap 1601644 1601645 TTGTCTCCGAGCAGA GGGCGGGC-G-CGCCGC GTT GCGGCGTCAGCCCGCCC GTTCTGTTTGGCCCG TERM 978 1601645 - 1601679 + T 100 -21.5 -2.88571 | gap 2, opp_overlap 1601645, overlap 1601644 TTGTCTCCGAGCAGA GGGCGGGC-G-CGCCGC GTT GCGGCGTCAGCCCGCCC GTTCTGTTTGGCCCG ilvA 1602811 - 1601816 - | serine/threonine dehydratase TERM 979 1603861 - 1603884 + H 100 -18.2 -5.64873 | opp_overlap 1603855 ATAAACGCATTCAGA GGTGGCCCCA TTAC TGGGGCCACC TTTTTTATTGTTGAA SRU_1271 1603943 - 1605463 + | pilin glycosylation enzyme, putative TERM 980 1605780 - 1605748 - f 75 -12.2 -3.55453 | gap 2, overlap 1605744 1605742 AAGTTAAAATAGGAA TGCTCCTCATGCGCAC CAT GTGCGC-TGAGGA-CA CAGCAAGCAAGTTTG SRU_1272 1605875 - 1607164 + | type II secretion system protein F SRU_1273 1607346 - 1609478 + | type IV pilin SRU_1274 1609587 - 1610099 + | hypothetical protein SRU_1275 1610326 - 1610976 + | hypothetical protein TERM 981 1611974 - 1611964 - g 81 -8.2 -4.4773 | GGACATCAAGGAAAA CGGG TAC CCCG ACAACTCCTACTGGA SRU_1276 1611344 - 1612135 + | hypothetical protein TERM 982 1612311 - 1612348 + F 100 -31.5 -3.6018 | opp_overlap 1612311 ACATTCGAGAAAGAA CGGAAGCCGCAGGGCGA GCGC TCGCCCTGCGGCTTCCG TTGTGTAATCTCTTC TERM 983 1612348 - 1612311 - f 100 -31.5 -4.08279 | opp_overlap 1612311 ACATTCGAGAAAGAA CGGAAGCCGCAGGGCGA GCGC TCGCCCTGCGGCTTCCG TTGTGTAATCTCTTC pilT 1612496 - 1613926 + | twitching motility protein PilT TERM 984 1615078 - 1615108 + G 70 -11.1 -3.55203 | gap 1, opp_overlap 1615047, overlap 1615066 1615103 CGTTGGGGCCACCGG CGCGGCG-CTTCGG CTGC TCGACGACGCCGCG TTTGCGCCGCATTTT SRU_1278 1614149 - 1616200 + | fimbrial assembly protein (PilN) SRU_1279 1617484 - 1616234 - | hypothetical protein TERM 985 1618683 - 1618721 + G 74 -10.3 -3.78775 | opp_overlap 1618679 AACGCACAGAAGGCC CTCCGTCG-GCTCGGCGAA CGG TACGCCGAGGACG-CGGAG TTTCCTGCTCCCGAA SRU_1280 1617501 - 1618781 + | general (Type II) secretion pathway (GSP) D protein, putative SRU_1281 1618901 - 1619701 + | AP endonuclease gatC 1619807 - 1620094 + | glutamyl-tRNA(Gln) amidotransferase, C subunit SRU_1283 1620264 - 1620677 + | transcriptional regulator, putative SRU_1284 1620792 - 1621151 + | hypothetical protein TERM 986 1621728 - 1621754 + T 100 -12.2 -5.66338 | opp_overlap 1621728 CCCCCACCAGGAGAA GCCCCAGGGC CGTCTGT GCCCCGGGGC TTTTTTATTGTCTTT TERM 987 1621754 - 1621728 - T 83 -14.4 -3.44051 | opp_overlap 1621728 CCCCCACCAGGAGAA GCCCCAGGGC CGTCTGT GCCCCGGGGC TTTTTTATTGTCTTT galT 1622899 - 1621787 - | galactose-1-phosphate uridylyltransferase TERM 988 1623571 - 1623559 - g 95 -5.5 -5.40072 | opp_overlap 1623566 GGCGTTCCAAAAAAA GAGGA TCG TCCCC CTGGCAATAATCGTG SRU_1286 1623361 - 1625439 + | sodium/alanine symporter TERM 989 1625445 - 1625473 + F 84 -15.9 -3.30243 | overlap 1625447 GGAGACGTGATGGGC CCGGGGGCGGGGC GTC GCCTCGCCTCCTG TTGTCCCACGTCGGT TERM 990 1625447 - 1625471 + F 89 -17.1 -3.21924 | overlap 1625445 AGACGTGATGGGCCC GGGGGCGGGGC GTC GCCTCGCCTCC TGTTGTCCCACGTCG upp 1625518 - 1626150 + | uracil phosphoribosyltransferase SRU_1288 1626560 - 1626198 - | hypothetical protein SRU_1289 1626687 - 1628639 + | integral membrane protein-putative Na+H+ antiporter SRU_1290 1627958 - 1629061 + | mannose-1-phosphate guanylyltransferase TERM 991 1629340 - 1629316 - g 77 -14.2 -3.38768 | opp_overlap 1629331, overlap 1629309 CGAGACGATGCACAA CGCCGCCGGC ATCGG GCTGGCGGCG CCCCAGGTCGGGCGC def 1629197 - 1629784 + | peptide deformylase SRU_1292 1629846 - 1630511 + | hypothetical protein SRU_1293 1630474 - 1631355 + | hemin ABC transporter, ATP-binding protein SRU_1294 1631454 - 1632050 + | ATP:cob(I)alamin adenosyltransferase, putative SRU_1295 1632203 - 1633396 + | M24/M37 family peptidase TERM 992 1633604 - 1633634 + GT 100 -18.2 -3.73224 | GGCGGGCGTCACGAC GGCGACGCGGGCCT TGG AGGCCCACGGCGCC TTTAATGCGGGCTAC TERM 993 1633755 - 1633775 + GT 70 -10.4 -3.61398 | gap 1 CAGCGCCTGGAGCAC CCGGTCGGG GTGG CCCG-CCGG TTGTTAGAGACGGGG TERM 994 1634030 - 1634053 + GT 74 -11.6 -3.53012 | GGGTACGCTCGCGGC GGCGACCTCC ACCG GGGGGACGCC TTTCAAGCCGCCGGG SRU_1296 1633353 - 1634390 + | asparaginase SRU_1297 1636594 - 1634396 - | outer membrane protein, putative TERM 995 1634980 - 1634966 - G 74 -12.8 -3.53811 | CCGAGCCTCCGGAAA GGCGCC CCG GGCGCC GATCTCGAAGCCCCG spoIID 1637828 - 1636584 - | sporulation protein SpoIID TERM 996 1637993 - 1638010 + H 71 -4.7 -4.39828 | overlap 1637995 ATGGGGGCTTCGTTC CCGGTCG TCAT CGGCCCG TTTTGTCCACCTCTT SRU_1299 1638051 - 1638839 + | TatD family hydrolase TERM 997 1638892 - 1638851 - T 83 -5.1 -5.055 | opp_overlap 1638865 GTAACGGCCAAAAAA GCGGGTCCGAAAAACTGCT CAGA AGCTGTTTTTCGGATAGAC ATTCAGCTGAGACAC TERM 998 1639180 - 1639151 - T 100 -22.2 -5.66684 | opp_overlap 1639151 CAAGGCATAAAAAAA CGCCCCGACCGG GACGTG CCGGTCGGGGCG TTTGGAGAGCCGCGG TERM 999 1639151 - 1639180 + T 100 -22.2 -3.53012 | opp_overlap 1639151 CAAGGCATAAAAAAA CGCCCCGACCGG GACGTG CCGGTCGGGGCG TTTGGAGAGCCGCGG dnaK 1641284 - 1639281 - | chaperone protein DnaK pgsA 1641646 - 1642251 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase pyrE 1642295 - 1642972 + | orotate phosphoribosyltransferase TERM 1000 1643019 - 1643029 + F 71 -8.2 -3.9578 | overlap 1642979 CGAACCTGCCGGACT GGGG ACG CCCC TTGTTTCCGCTCTCT cinA 1643066 - 1644304 + | competence/damage-inducible protein CinA SRU_1304 1644439 - 1645422 + | zinc-binding dehydrogenase family oxidoreductase TERM 1001 1645467 - 1645436 - T 95 -20.2 -3.33261 | overlap 1645459 AGACCGACACACGAA CGCCCCGAGTCCTC GGCT GAGAACCCGGGGCG GAGGAAGAGCACCGA osmC 1645966 - 1645499 - | osmotically inducible protein C SRU_1306 1646980 - 1646054 - | small conductance mechanosensitive ion channel (MscS) family protein SRU_1307 1648065 - 1646977 - | integral membrane protein TERM 1002 1648003 - 1647970 - G 85 -15.3 -3.69621 | gap 1, opp_overlap 1647974 AGGCAGAAGTCCAAA GGCCGCGCCCCACAGC GGC GCTTTGAGGC-CGGCC TCGCGGCCCGCCGTG TERM 1003 1648325 - 1648311 - gH 70 -2.1 -4.62069 | gap 1 GGCGGACGGGAAAAA GACTGG CTGA CC-GTC GAACTCGTCCAGTCG SRU_1308 1648083 - 1648664 + | hypothetical protein SRU_1309 1648562 - 1649818 + | hypothetical protein yneN 1650400 - 1649828 - | thioredoxin SRU_1311 1650768 - 1650409 - | general stress protein pepF 1650943 - 1652766 + | oligoendopeptidase F SRU_1313 1652800 - 1653438 + | SAM-dependent methyltransferase, putative TERM 1004 1653474 - 1653446 - f 74 -5.8 -4.4078 | opp_overlap 1653447 1653449, overlap 1653447 CGTCCTGAAGGAAAA GCGGGCGTGGGG GACCG CCCCACGGCTGT CTTCCAAATGGCCGT SRU_1314 1653520 - 1654569 + | universal stress protein TERM 1005 1654827 - 1654883 + G 77 -14.2 -3.4285 | gap 1, opp_overlap 1654812 1654811, overlap 1654852 CGGGGGCGGGGCCGG TGCCGGCCCCACGCGTTCGGGAGCGGG CCGT CGCCCACCCGACCGCGGCGGGC-GGCA TTCTCAATTACGTCG SRU_1315 1654556 - 1655521 + | universal stress protein SRU_1316 1655563 - 1656255 + | domain of unknown function, putative TERM 1006 1656369 - 1656337 - T 100 -27.1 -4.78848 | CCTGCAAACACAAAA CCCCCTCCGTCCGGC ACT GCCGAACGGAGGGGG GAAAGGGTAGCTCTG clpC 1659023 - 1656396 - | ATP-dependent Clp protease, ATPase subunit TERM 1007 1656476 - 1656498 + g 88 -9.8 -4.39166 | CGGCAACCTCTTCGG CGGAGACGCT GTT GGCCTCTCCG TTTTCGTCTGTCGGG TERM 1008 1659062 - 1659048 - R 95 -12.8 -4.3534 | GTTGAACGATCAAAA GCGCCG CGT CGGCGC CCTACACGAACAGGG SRU_1318 1659740 - 1659330 - | iron-sulfur cluster assembly accessory protein, putative SRU_1320 1660099 - 1660614 + | hypothetical protein SRU_1319 1663070 - 1660605 - | dipeptidyl-peptidase TERM 1009 1661307 - 1661297 - G 86 -8.2 -4.71426 | opp_overlap 1661275, overlap 1661298 CGTGGACGAAGAAAA CGGC CGC GCCG TTCGGATTGTCGGGC TERM 1010 1661870 - 1661925 + g 83 -13.2 -3.79113 | overlap 1661873 TGTCGTGCTGCCGAT CGAGCACCGTCAGGTCGCCTGTTTCG GGGT CGAGACGGGCGATCCACCGGTCCTTG TTGTTGTCCGCCCGT TERM 1011 1661873 - 1661922 + g 79 -11.3 -4.02817 | overlap 1661870 CGTGCTGCCGATCGA GCACCGTCAGGTCGCCTGTTTCG GGGT CGAGACGGGCGATCCACCGGTCC TTGTTGTTGTCCGCC TERM 1012 1663230 - 1663247 + r 79 -11.3 -3.82604 | CTGTCATCCTCTCGC TGGGTCC CGGC GGACCCA TTGTTGCTTCGATGC SRU_1321 1664811 - 1663459 - | hypothetical protein TERM 1013 1666113 - 1666091 - g 74 -5.4 -4.46212 | CCTTCTACGAGAAAA CGGCAATCCC GTC GGGCTCTCCG AGGCCAACATTCAGA SRU_1322 1665591 - 1666361 + | hypothetical protein SRU_1323 1667149 - 1666436 - | cytidine deaminase SRU_1324 1667134 - 1668327 + | aspartate aminotransferase SRU_1325 1669244 - 1668363 - | nucleotidyl transferase, putative SRU_1326 1670242 - 1669241 - | 3'(2'),5'-bisphosphate nucleotidase SRU_1327 1670614 - 1670282 - | hypothetical protein SRU_1328 1671970 - 1670801 - | hypothetical protein TERM 1014 1671522 - 1671503 - G 77 -12.8 -3.64103 | GAGCCACACCCGAAA CGGGGACG ATTG CGCCCCCG CGAGCCCGGCGCCGC SRU_1329 1673287 - 1672070 - | putative potassium-efflux system protein TERM 1015 1672505 - 1672490 - G 77 -6.8 -4.57073 | gap 1 GAGCCCGGCGAAAAA GGCC-CC GAT GGCGGCC GAGAATCCGAGCAGC TERM 1016 1673067 - 1673053 - G 77 -5.6 -4.62336 | ACCCGATGCGAAAAA GGAGCG CAA CGATCC CGAGTTGGGCCAGGA SRU_1330 1675941 - 1673398 - | permease SRU_1331 1676884 - 1676036 - | ABC transporter, ATP-binding protein SRU_1332 1678499 - 1677060 - | hypothetical protein SRU_1333 1680646 - 1678565 - | hypothetical protein TERM 1017 1678781 - 1678799 + g 74 -5.8 -4.56597 | opp_overlap 1678780, overlap 1678790 GCCCGACGACGAACT CGCGGCCG CTC CGTCCCCG TTTTTCGCGGCCGGC TERM 1018 1680642 - 1680628 - G 70 -10 -3.72576 | overlap 1680630 GTCCGCGGTAGGAAA GAGGGA GTG TCCCTC CCAAGCGGCCTCGCC pyrB 1682481 - 1681513 - | aspartate carbamoyltransferase SRU_1335 1683151 - 1682537 - | phosphoribosyl transferase domain-containing protein SRU_1336 1683283 - 1684215 + | hypothetical protein SRU_1337 1684890 - 1684222 - | hypothetical protein SRU_1338 1686286 - 1684958 - | transporter, putative TERM 1019 1686923 - 1686908 - g 81 -5.4 -4.7497 | overlap 1686915 TTTACCGATCAAAAA GAGCAA GGCC TCGCTC ACACTGAAGCCCGAA SRU_1339 1686368 - 1687783 + | hypothetical protein TERM 1020 1688075 - 1688032 - g 80 -15.8 -3.32844 | CCGCGTACTCGACAA CGCCCCCCGCCCCGTCCGCG AGGT CGCGGAGGCGGTGGCGGACG CCCTGGAGGACGTAC SRU_1340 1687865 - 1688188 + | CRS1/YhbY domain-containing superfamily TERM 1021 1688202 - 1688183 - T 76 -13.6 -3.14132 | TCGGGGGCCGAGGAA GCGTAGGG GCGC CCCTACGC CGTCTGCGTCGTCCA SRU_1341 1689021 - 1688197 - | metallo-beta-lactamase-related protein TERM 1022 1689152 - 1689135 - R 89 -12.7 -4.18782 | overlap 1689130 AGAAATGAAACGAAA GCGGCGA TCTC TCGCCGC CACGGCGGTGCCGTT SRU_1342 1690034 - 1689207 - | inositol monophosphatase family protein rnc 1690838 - 1690092 - | ribonuclease III TERM 1023 1690208 - 1690222 + g 70 -4.2 -4.4767 | CGTCCCCAACCCGCA CCTCCA CCG TGAAGG TTTTGTCGTGGCTCG TERM 1024 1690463 - 1690485 + g 74 -7.6 -4.23892 | GGATGCTAGGGTTGT CGCGCCCG TCTCCCT CGGCCGCG TTTTCGCTCATTAGG TERM 1025 1691992 - 1692027 + G 77 -3.9 -4.82901 | gap 2, overlap 1691993 GGGGCGGGTGCCGTG GCCGTCGC-C-GGGGGG CACA CCCTCGAGCGCGACGGA TTTTTCTACGCCCCG SRU_1344 1690894 - 1692381 + | aldehyde dehydrogenase-like protein yneI TERM 1026 1692398 - 1692387 - f 88 -7.2 -4.92757 | TGAGGAATAAGAAAA CGGC CCGG GCCG CCACCCGTTGAGCGA SRU_1345 1692672 - 1693568 + | hypothetical protein TERM 1027 1693880 - 1693896 + G 77 -3.6 -4.77036 | overlap 1693867 GGGCGGGGACAGGGG CCGTGC TGATT GCAGGG TTTTTCGTGCTGGCG SRU_1346 1693663 - 1694595 + | integral membrane protein, putative SRU_1347 1694704 - 1695348 + | hypothetical protein TERM 1028 1695718 - 1695754 + G 80 -15.7 -3.24747 | GGCGGACACATGGGT CGACTCCGCCCGGACCG TCA CGGTCTGGGCGTTGCCG TTGATGCTCTGGGGG SRU_1348 1695677 - 1696198 + | hypothetical protein gpm 1696259 - 1696936 + | putative phosphoglycerate mutase SRU_1350 1696917 - 1698455 + | putative isochorismate synthase menD 1698481 - 1700256 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase SRU_1352 1701345 - 1700329 - | cyclase, putative TERM 1029 1700775 - 1700825 + g 74 -5.8 -4.46212 | GAAGCGTGATCGTCT CGTCCCCGAGGGGCTCGGACCACG TGT CCTGGAACGTTTCCGTCGGGTACG TTTTCTCGTCGGCCG TERM 1030 1701723 - 1701755 + G 70 -10.6 -3.52073 | overlap 1701717 TCACGCAGGCCGGGC TCGTGGCCCCTC AGACGATGC GACGGGCCACGA TTCTGGTCTTCGGCC menA 1701392 - 1702360 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 1031 1703120 - 1703077 - g 72 -11.6 -3.52102 | gap 1, overlap 1703107 ATTTCATCGAGAGAA CGAGTCTCCCCGTGGCG-CTC GAC GAGACGACCCGGGAAGTCCCG CCCGCAACCCTCCGA menC 1702374 - 1703474 + | o-succinylbenzoic acid (OSB) synthetase TERM 1032 1704717 - 1704741 + G 72 -13.6 -3.14132 | gap 1 GGCGGTTCCTCACGA GGCCTACGGGC ATCG GCCCGT-GGCC TTCGTCCGGACGCGC menE 1703485 - 1704912 + | O-succinylbenzoate-CoA ligase TERM 1033 1705576 - 1705555 - g 75 -12.9 -3.38316 | TCACGAGGGAAGGAA CGGCGCGGG ACTA CCTGCGCCG AGACGGGCGCTACTG SRU_1356 1704921 - 1705679 + | acetyltransferase SRU_1357 1706682 - 1705741 - | transcriptional regulator, putative SRU_1358 1707284 - 1706835 - | hypothetical protein SRU_1359 1707692 - 1707351 - | anti-sigma B factor antagonist, putative TERM 1034 1707884 - 1707868 - H 73 -11.5 -3.57144 | opp_overlap 1707866 1707877 GGCCGGACTGTGAAA CGACGCC CCA GGCGCCG CCATTGCTGCCTTGA SRU_1360 1708182 - 1708649 + | hypothetical protein TERM 1035 1709292 - 1709324 + G 70 -3.9 -4.56597 | overlap 1709293 ACGTCCGGGCAGACA GCGCGCGATACTTCG CCT CGGAGAAGCGCTCGG TTTTTCCCGACAGCG TERM 1036 1710636 - 1710693 + G 93 -19.7 -2.52464 | gap 1, opp_overlap 1710613 GGGACGCCCGGGTGC GGCGGCGGCTCGGTCA-AGGGCCGGCGC GTC GCGACCGCCCGGTGGCCGGGCCGGTGCC TCCGTTGGGCGCCGA SRU_1361 1708775 - 1710922 + | hypothetical protein TERM 1037 1711428 - 1711443 + G 79 -4.6 -4.72272 | overlap 1711417 TGCGCGGGCCCTTTC GACCCG GCCC CGGTTC TTTTTGCTCGACGAG SRU_1362 1710919 - 1711704 + | ABC transporter, ATP-binding protein TERM 1038 1711787 - 1711770 - g 85 -5.5 -5.00616 | opp_overlap 1711782 TGCGGTCGCAAAAAA GCCGG CTTCGACC CCGGC GCGCGTATGCTTTTC TERM 1039 1712194 - 1712184 - g 70 -2.4 -4.63218 | GCGGCTCGAAGAAAA GGGC TAC GCCT TCCAGAGCGAGACCG glmS 1711732 - 1713675 + | glucosamine--fructose-6-phosphate aminotransferase, isomerizing prfA 1713883 - 1714956 + | peptide chain release factor 1 SRU_1365 1715034 - 1715642 + | 30S ribosomal protein S6 rpsR 1715696 - 1715908 + | ribosomal protein S18 rplI 1715958 - 1716407 + | ribosomal protein L9 TERM 1040 1716428 - 1716470 + T 90 -13.5 -4.03978 | gap 1, opp_overlap 1716424 1716437, overlap 1716429 TGGCCAGCAGACTGC GGCGACAGAGGGGCCTTCAT TGCC GTGAGGGCCCCTTTG-CGCA TTTCTGTAGGCGCTT TERM 1041 1716429 - 1716469 + T 88 -17 -3.01905 | gap 1, opp_overlap 1716424 1716437, overlap 1716428 GGCCAGCAGACTGCG GCGACAGAGGGGCCTTCAT TGCC GTGAGGGCCCCTTTG-CGC ATTTCTGTAGGCGCT SRU_1368 1718011 - 1716863 - | cystathionine beta-lyase MetC TERM 1042 1717213 - 1717253 + g 72 -5.3 -4.4078 | gap 2, overlap 1717219 CCCGTTCGACGCCGT CGTGATCGGCCAGCGCCGC CGCGA GCGCC-CGGGCCG-TCTCG TTTTGCTTGCGCACC dnaA 1719726 - 1718032 - | chromosomal replication initiator protein DnaA hppD 1721165 - 1720011 - | 4-hydroxyphenylpyruvate dioxygenase SRU_1371 1721991 - 1721257 - | TonB, putative SRU_1372 1722145 - 1723158 + | zinc-binding alcohol dehydrogenase TERM 1043 1723228 - 1723217 - f 100 -4.4 -5.42259 | CGAGCCCCAAAAAAA TACG GCGT CGTA GATTCTCCTCTTCGG TERM 1044 1723548 - 1723583 + G 76 -8.2 -4.25104 | gap 1, opp_overlap 1723547, overlap 1723526 TTCACGCGGGAGAAC CGCGACCTTCTCGCGGC GGA GTTGCGGGGAAG-CGCG TTTTCGTGGCGGGCC TERM 1045 1724045 - 1724057 + G 72 -4.7 -4.52589 | overlap 1724042 GGTGCCGGTCTACTC CCACC GCG GGGGG TTTTATGTGCGACAG TERM 1046 1724482 - 1724447 - g 70 -10.4 -3.65351 | gap 1, opp_overlap 1724447 GGACCCGGACGCAAA GCAGG-CAGGAGCGGCC CCG GACCGATCCCGTCCTAC TGATTCCTGACCGGC SRU_1373 1723266 - 1724492 + | FAD dependent oxidoreductase, putative SRU_1374 1724513 - 1725064 + | hypothetical protein SRU_1375 1728243 - 1725067 - | Zn-dependent aminopeptidase, putative TERM 1047 1727587 - 1727577 - G 72 -8.2 -4.07568 | CGGGGTTCTGTAAAA CGCC GGT GGCG CCAATTGTATATTCG SRU_1376 1728316 - 1728420 + | hypothetical protein SRU_1377 1728439 - 1728741 + | DNA-binding protein HU TERM 1048 1729261 - 1729274 + G 76 -2.3 -4.86731 | CGGGGGGGCCCTCGT GCTCG TGGT TGGGC TTTTCTTTGCGACGC TERM 1049 1729634 - 1729675 + G 71 -12.1 -3.31461 | gap 1, opp_overlap 1729626 1729622 1729621, overlap 1729636 1729638 1729639 AACGACATCGCGGAC GCCACCGGCGCCGCGGACGC CCA GCG-CCGCGCCGCCGATCTC TTGTACCGCTGGATG TERM 1050 1729636 - 1729673 + G 73 -13.3 -3.22475 | gap 1, opp_overlap 1729626 1729622 1729621, overlap 1729634 1729638 1729639 CGACATCGCGGACGC CACCGGCGCCGCGGACGC CCA GCG-CCGCGCCGCCGATC TCTTGTACCGCTGGA TERM 1051 1729638 - 1729671 + G 78 -15.9 -3.17622 | gap 1, opp_overlap 1729626 1729622 1729621, overlap 1729636 1729634 1729639 ACATCGCGGACGCCA CCGGCGCCGCGGACGC CCA GCG-CCGCGCCGCCGA TCTCTTGTACCGCTG TERM 1052 1729639 - 1729670 + G 93 -19.4 -2.50252 | gap 1, opp_overlap 1729626 1729622 1729621, overlap 1729638 1729636 1729634 CATCGCGGACGCCAC CGGCGCCGCGGACGC CCA GCG-CCGCGCCGCCG ATCTCTTGTACCGCT SRU_1378 1728782 - 1730095 + | hypothetical protein SRU_1379 1730204 - 1730869 + | hypothetical protein SRU_1380 1731321 - 1730905 - | glyoxalase family protein TERM 1053 1731065 - 1731040 - G 70 -11.8 -3.4285 | GGATGGAAGGGAGAA GCCGAGGTGG TGAATG CCGCCTCGGC CCGGCACCGATGGAT pilR 1732878 - 1731355 - | two-component system regulatory protein SRU_1382 1733437 - 1733027 - | hypothetical protein sufE 1734004 - 1733579 - | Fe-S metabolism associated domain-containing protein sufS 1735340 - 1734084 - | SufS subfamily cysteine desulfurase TERM 1054 1735379 - 1735402 + r 76 -8.2 -4.18018 | gap 1, overlap 1735380 AGTAACGTGTGGGCG TGTGATGAGGG ATG CCCTCA-CACG TTTTCCCTCCGCAGG sufD 1736759 - 1735419 - | FeS assembly protein SufD sufC 1737620 - 1736850 - | FeS assembly ATPase SufC TERM 1055 1737705 - 1737751 + r 71 -11.5 -3.43492 | gap 1, opp_overlap 1737710, overlap 1737706 AGGCCGGGGCAGAAG ACAAACGGGAGCGTG-GACGGA AGTA TCCGTCGCACGCCCCCGTGGGC TTCTGCTCAATGTGC TERM 1056 1737706 - 1737750 + r 74 -15 -2.65774 | gap 1, opp_overlap 1737710, overlap 1737705 GGCCGGGGCAGAAGA CAAACGGGAGCGTG-GACGGA AGTA TCCGTCGCACGCCCCCGTGGG CTTCTGCTCAATGTG TERM 1057 1737746 - 1737710 - R 100 -21 -4.27117 | gap 1, opp_overlap 1737706 1737705 GGGGCAGAAGACAAA CGGGAGCGTG-GACGGA AGTA TCCGTCGCACGCCCCCG TGGGCTTCTGCTCAA sufB 1739277 - 1737766 - | cysteine desulfurase activator complex subunit SufB TERM 1058 1738376 - 1738402 + g 73 -12.2 -3.37796 | TAGACGCCGCCCTCA CCGGTGTCCGGG TCG CCCGGGTACCAG TTCTGGATCGTGGAG TERM 1059 1739798 - 1739779 - g 74 -2 -4.77165 | opp_overlap 1739756 TCTTCGACAAGAAAA CCCGGC TCTATCTT GACGGG TCGGAGCTCGACTTT SRU_1388 1739568 - 1739900 + | hesB family protein SRU_1389 1741054 - 1740509 - | hypothetical protein SRU_1390 1741431 - 1741051 - | hypothetical protein SRU_1391 1742108 - 1741557 - | acetyltransferase SRU_1392 1743231 - 1742110 - | oxygen-independent coproporphyrinogen III oxidase, putative SRU_1393 1744324 - 1743242 - | hypothetical protein TERM 1060 1745235 - 1745250 + G 76 -2.5 -4.87665 | opp_overlap 1745229 GGGCGAATACCCGAC CGGGA CGGACA TCTCG TTTTTCTACGTGAAC SRU_1394 1744369 - 1745544 + | hypothetical protein TERM 1061 1746079 - 1746089 + G 72 -4.6 -4.56597 | ACGTGGTGGCCGTCA GCTG CAC CGGC TTTTTCGCCCCGGGG SRU_1395 1745649 - 1746830 + | chalcone synthase, putative SRU_1396 1749159 - 1746862 - | hypothetical protein TERM 1062 1748209 - 1748185 - G 74 -12.1 -3.56092 | overlap 1748200 CCAGGAGGCGGCAAA CGGCACCGCAT CCA ACGGGGTGCCG GACGGCGCGTGGCGC TERM 1063 1748540 - 1748556 + g 71 -12.3 -3.30214 | opp_overlap 1748539 1748535 TCGGCGACAACGTAG GACAGCG GGG CGCTGTC TTCGTCTCGTACGTT TERM 1064 1749030 - 1749068 + g 73 -12.5 -3.40403 | gap 1 AGACCGTATCCCCGC CGTTGTTGAGCGCCGGCC AGTC GTCCGGCG-TCAAGAACG TTGTGCTCGGGAACG SRU_1397 1749328 - 1749606 + | ISSru3, transposase insA SRU_1398 1749570 - 1750046 + | ISSru3, transposase insB SRU_1399 1751806 - 1750568 - | N-acyl-L-amino acid amidohydrolase TERM 1065 1751438 - 1751423 - G 79 -2.4 -5.00616 | overlap 1751426 GTTGGGCTGAAAAAA GACGCG GGCC CGCCCC TGCAGTTGGTCACGG SRU_1400 1754136 - 1751977 - | hypothetical protein TERM 1066 1752669 - 1752646 - G 74 -10.2 -3.86897 | gap 1, overlap 1752615 CCCACTCCCGAGAAA CGCGGCGGTCC GCA GGCCCGC-GCG GCGTCGGAGAACCAG SRU_1401 1755813 - 1754149 - | subtilisin-like serine proteases SRU_1402 1756759 - 1755806 - | K+-dependent Na+/Ca+ exchanger-like protein SRU_1403 1758262 - 1756967 - | cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein SRU_1404 1758822 - 1758409 - | hypothetical protein SRU_1405 1759109 - 1759489 + | hypothetical protein SRU_1406 1759761 - 1759624 - | hypothetical protein SRU_1407 1761357 - 1759861 - | outer membrane efflux protein TERM 1067 1760664 - 1760677 + g 79 -4.5 -4.72272 | gap 1 CGACCGCCGGAATTT GGC-CG GCC CGCGCC TTTTTCGTGACCAGG TERM 1068 1760824 - 1760848 + g 71 -12.7 -3.28712 | GGCCTGCAGGGCGTC GGCCCGACGGG GCG CCAGCCGGGCC TTATCGAGCGCGGCG SRU_1408 1762612 - 1761407 - | HlyD family secretion protein TERM 1069 1762028 - 1762052 + g 74 -7.7 -4.24002 | overlap 1761994 GGCCAGGTCCGCGGC GGCGGCGACCG AGT CGGTCCGTGCC TTTTGGAATTTGAGG SRU_1409 1765129 - 1762796 - | toxin secretion ABC transporter ATP-binding protein, putative SRU_1410 1767198 - 1765462 - | hypothetical protein TERM 1070 1765963 - 1765945 - GH 74 -12.4 -3.5361 | opp_overlap 1765944 1765942 1765953 1765955, overlap 1765936 GAAGGACGGAGACAA TCCCCGGG CCG CCCGGAGA ATGTGTGCTGTGCGC TERM 1071 1767095 - 1767106 + Gg 86 -7.2 -4.86731 | GGCAGGAGGTGCTGG CCGC CGTA GCGG TTTTCTTTGGCGAGA panC 1766284 - 1767171 + | pantoate--beta-alanine ligase panD 1767213 - 1767653 + | aspartate 1-decarboxylase SRU_1413 1767934 - 1768788 + | 3-hydroxybutyryl-CoA dehydrogenase SRU_1414 1769864 - 1768902 - | PhoH family protein dapF 1769969 - 1770826 + | diaminopimelate epimerase TERM 1072 1770856 - 1770881 + T 73 -8.9 -4.00124 | opp_overlap 1770820, overlap 1770861 GGCGTACTGCGCAGT GCCTACCGCAG CTGG CTGCGGTTGTC TTTGATTGTGGCGTC TERM 1073 1770861 - 1770876 + T 76 -10.4 -3.91905 | opp_overlap 1770820, overlap 1770856 ACTGCGCAGTGCCTA CCGCAG CTGG CTGCGG TTGTCTTTGATTGTG SRU_1416 1772933 - 1770858 - | peptidylprolyl cis-trans isomerase TERM 1074 1772968 - 1772978 + H 79 -8.2 -4.25104 | TGAGGAAGAAGTGTT CCGC GAG GCGG TTTTGATCAGGAGAC TERM 1075 1773449 - 1773426 - g 81 -5.8 -4.72272 | opp_overlap 1773435 1773436, overlap 1773428 CCCCTCTACCAAAAA CTGGACGCGG CGGG CCGGGCCCGG TTTGGGCGCGATGTG SRU_1418 1773108 - 1774094 + | hypothetical protein SRU_1417 1775328 - 1774087 - | hypothetical protein TERM 1076 1774344 - 1774302 - G 76 -14.8 -3.09272 | overlap 1774299 ACACTTCCAAAAGCA CCATCGCGCTCCGCTCGC TGGGGGC GCGAGGGGAGCGCAGCGG GATGTCGAGGGCGTC TERM 1077 1774508 - 1774492 - G 84 -9.4 -4.56597 | opp_overlap 1774478 CGTCCCGCCCAAAAA CCGACG GCGCA CGTCGG GGTGTGGGCTCGGCT TERM 1078 1775392 - 1775374 - R 86 -8 -4.72846 | opp_overlap 1775374, overlap 1775366 CCACATATGCAAAAA GCCCCTGC CGC ACCGGGGC GAGAGGAGCTTCTTG rpmA 1775692 - 1775432 - | 50S ribosomal protein L27 rplU 1776260 - 1775742 - | ribosomal protein L21 SRU_1421 1776285 - 1776947 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase SRU_1422 1777011 - 1777616 + | pyridoxamine 5'-phosphate oxidase family protein ybjU 1778690 - 1777644 - | L-allo-threonine aldolase greA 1779223 - 1778729 - | transcription elongation factor GreA TERM 1079 1779303 - 1779270 - R 100 -14.5 -5.00884 | opp_overlap 1779274 ACCCCTGCCAAAAAA GGAACGCCACGGCCG GAAG CGGCAGCGGCGTTTC GGGTGACACTTTTCT TERM 1080 1779274 - 1779299 + r 75 -11.7 -3.60475 | opp_overlap 1779270 CTGCCAAAAAAGGAA CGCCACGGCCG GAAG CGGCAGCGGCG TTTCGGGTGACACTT SRU_1425 1780328 - 1779399 - | LD-carboxypeptidase family protein TERM 1081 1779819 - 1779865 + g 78 -13.7 -3.59979 | gap 2 GACCGCCGTTCCGGG CGCGAGGGCGGTCGGGGAGGCGT CGA ACGCCTCCACGAA-GCCCG-GCG TTTGGCCTGCGGCCC SRU_1426 1780744 - 1780373 - | hypothetical protein TERM 1082 1780656 - 1780642 - G 73 -3.5 -4.62069 | overlap 1780646 TCTGCAGTGCAAAAA CCACC GCAAA GATGG CGAGAATCAGTGAAA SRU_1427 1781884 - 1780784 - | glycosyl transferase, group 2 family protein SRU_1428 1782577 - 1781915 - | hypothetical protein TERM 1083 1782542 - 1782532 - GR 74 -2.4 -4.73613 | CGAGTACGAAGAAAA CGAC CAT GGCG ACGCTACAGGTAGCG SRU_1429 1783223 - 1782546 - | putative acyltransferase crtB 1784162 - 1783239 - | phytoene synthase TERM 1084 1783896 - 1783918 + g 70 -10.4 -3.72695 | opp_overlap 1783889, overlap 1783897 CCACAGCACCGTCTC GGCGGGCGGG CGG CCCGCCAGCG TTTCGTCCAACCGGT TERM 1085 1783897 - 1783917 + g 71 -13.9 -2.83403 | opp_overlap 1783889, overlap 1783896 CACAGCACCGTCTCG GCGGGCGGG CGG CCCGCCAGC GTTTCGTCCAACCGG SRU_1431 1785116 - 1784202 - | hypothetical protein TERM 1086 1785489 - 1785479 - gH 71 -8.2 -3.84719 | opp_overlap 1785481 AGGTTGAAATTGAAA CCGG CGG CCGG TGGCGCGAAAAACAC SRU_1432 1785067 - 1785948 + | hypothetical protein dcd 1786047 - 1786604 + | deoxycytidine triphosphate deaminase TERM 1087 1786803 - 1786791 - g 83 -4.8 -5.00884 | opp_overlap 1786794, overlap 1786793 AGCGTTTCGAAAAAA TCCC GCACG GGGA CCACGTGCATTACGT TERM 1088 1786882 - 1786870 - g 72 -6.9 -4.18018 | GTTTCCGACTCAAAA GCCGG ACG CCGAC GAGCGAATTACGCCG SRU_1434 1786613 - 1786942 + | hypothetical protein SRU_1435 1787882 - 1786944 - | putative dihydrodipicolinate synthase gufA 1788796 - 1787966 - | gufA protein SRU_1437 1788947 - 1789393 + | hypothetical protein TERM 1089 1789559 - 1789518 - f 72 -3.7 -4.56597 | gap 1, overlap 1789520 TTTTTGTCCGAAAAA GAGAAGGCACTGTCCGTGAG GCG CCCA-GGACACCGACTTCTA ACACTGCCGCTCAGT SRU_1438 1789582 - 1790127 + | hypothetical protein TERM 1090 1790196 - 1790167 - T 100 -17.2 -4.564 | AAGGCCAAACGAAAA GCCCATCCCCGG GGGCGA CCGGAGATGGGC ACTGAATCCGAAGAC clpP 1790962 - 1790222 - | Clp protease lppC 1791188 - 1792120 + | acid phosphatase SRU_1441 1792122 - 1793813 + | hypothetical protein TERM 1091 1795088 - 1795106 + G 100 -10.2 -5.07486 | opp_overlap 1795073, overlap 1795089 GGAGCACGCCCAGCA TGTCGCCG CCA CGGCGACC TTTTTATTCGACGTC TERM 1092 1795089 - 1795105 + G 80 -13.7 -3.63768 | opp_overlap 1795073, overlap 1795088 GAGCACGCCCAGCAT GTCGCCG CCA CGGCGAC CTTTTTATTCGACGT ppx 1794054 - 1795661 + | exopolyphosphatase nuoJ 1795746 - 1796369 + | NADH dehydrogenase i, j subunit nuoK 1796485 - 1796790 + | NADH dehydrogenase i, k subunit nuoL 1796846 - 1798843 + | NADH dehydrogenase I, L subunit TERM 1093 1800577 - 1800591 + G 70 -10 -3.66178 | CCGAAGACGTGTCCA TCGACG TCC CGTCGA TTTCCCCTTGAACCG nuoM 1798965 - 1800602 + | NADH dehydrogenase i, m subunit SRU_1447 1800599 - 1800985 + | putative pterin-4-alpha-carbinolamine dehydratase TERM 1094 1801012 - 1801039 + F 74 -4.7 -4.65895 | opp_overlap 1801014 1801016 1801017, overlap 1801014 TCGGCGCGGGGCGAA AAGATCGCCGC GTGGGG GCGGCGGGCTA TTTTTGCGTAACCAA SRU_1448 1801071 - 1802570 + | proton-translocating NADH-quinone oxidoreductase chain N SRU_1449 1802628 - 1803182 + | hypothetical protein SRU_1450 1804891 - 1803212 - | nitrogen regulatory protein C SRU_1451 1806352 - 1804895 - | response regulator TERM 1095 1805474 - 1805485 + g 81 -5.8 -4.72272 | overlap 1805464 GTGGTGGATCTCGCG GAGG AGAA CCTC TTTTTCCTCCAGGGA TERM 1096 1806347 - 1806333 - G 77 -10 -4.0162 | CCGGGACAGGAGAAA TGGACG CAC CGTCCA TACACCCGAGCGAGG TERM 1097 1806563 - 1806546 - H 71 -11.3 -3.48593 | overlap 1806560 GATCTTGCTATAGAA CGCGCTT GCAA AAGCGCG CTCCACGATTCAGCC SRU_1452 1806594 - 1808201 + | hypothetical protein TERM 1098 1808286 - 1808316 + F 86 -18.3 -2.69151 | opp_overlap 1808282, overlap 1808288 CGCTTCACAGATCCG CACTGCGGGGGTG CAACC CGCCCCCGCGGTG TCCTGTATAGGCCCA TERM 1099 1808288 - 1808314 + F 79 -15.1 -2.88999 | opp_overlap 1808282, overlap 1808286 CTTCACAGATCCGCA CTGCGGGGGTG CAACC CGCCCCCGCGG TGTCCTGTATAGGCC TERM 1100 1808661 - 1808633 - g 71 -12.3 -3.28712 | CCGCCTCGGCCAGAA CGACGAGGCGGCG GCC CGCCGGGCCGTCG AAAGCCTGCTCGACC SRU_1453 1808331 - 1808921 + | hypothetical protein TERM 1101 1809449 - 1809429 - g 73 -14 -3.18264 | CGGTCGATGTAGGAA CGGCCGTC GACGT GACGGCCG ACGTAAGAAGCCTCC SRU_1454 1809113 - 1810978 + | hypothetical protein SRU_1455 1812947 - 1810998 - | protein kinase domain-containing protein TERM 1102 1812783 - 1812841 + g 83 -4.4 -5.00884 | gap 2 GGCCTCCTCCCGGAA CCGGCGCACGAAGGTGTCGTCGTCGGCC AGGTG GGGCG-CGATGAC-CTTGAGGGCGACGG TTTTTTCGAGGGCCT SRU_1456 1814494 - 1813040 - | aldehyde dehydrogenase aldX pncA 1814673 - 1815299 + | pyrazinamidase/nicotinamidase SRU_1458 1816924 - 1815335 - | hypothetical protein yfcX 1819088 - 1816929 - | fatty oxidation complex, alpha subunit hadHB 1820518 - 1819136 - | fatty oxidation complex, beta subunit TERM 1103 1820179 - 1820235 + g 72 -13.8 -3.07043 | overlap 1820165 1820185 TCGTCACCGTGAAGG CGGGCA-CGTGGTTCGGAATGCCGGC GGCGAGG GCCGAC-TCCCGAGCCACGTTGCTCG TGTTGACGTCCTGCA TERM 1104 1821110 - 1821089 - g 70 -10.1 -3.72576 | gap 1, overlap 1821090 1821093 GCCGCCGCGATCAAA GCGAGCGCCG GCA CGGCGCCC-C GGATCCCCATCGCAC SRU_1461 1820639 - 1821400 + | RNA methyltransferase TERM 1105 1821489 - 1821514 + F 100 -14 -5.79595 | CGTGGACTTGGTCAA CGCCCGTTCC ATCTCG GGAGCGGGCG TTTTTTATTTTGGCG TERM 1106 1822591 - 1822577 - g 72 -5.6 -4.33203 | overlap 1822580 CAAGAGAAGAAAGAA GAGGCG ACG CGTCTC GCGGAGTCTGCCGAA SRU_1462 1821854 - 1823803 + | methyl-accepting chemotaxis protein glpA 1825455 - 1823881 - | glycerol-3-phosphate dehydrogenase, anaerobic SRU_1464 1827141 - 1825681 - | hypothetical protein TERM 1107 1826077 - 1826119 + g 100 -11.9 -4.63527 | GGTGATCTTGGCGTC CACCTGCGTGATCCATCCG CCGTT CGGAAGGGCCGCGTGGGTG TTTTTGGACTGGTCA TERM 1108 1827055 - 1827105 + g 87 -18.9 -2.78384 | gap 1, opp_overlap 1827033 GTAATGCCGGAAGGT CCCCGGCCGCAGCGCG-AGCCCGA GGGC TCGGGAGGCGCACTGCGGCCGGAG TCTGGTCCGGCCGGA SRU_1465 1828775 - 1827126 - | sugar ABC transporter, periplasmic sugar-binding protein SRU_1466 1829711 - 1829421 - | hypothetical protein SRU_1467 1830557 - 1829763 - | sugar ABC transporter, permease protein SRU_1468 1831420 - 1830554 - | ABC transporter, permease protein SRU_1469 1832583 - 1831465 - | ABC transporter, ATP-binding protein TERM 1109 1831807 - 1831819 + g 72 -6.9 -4.18018 | overlap 1831801 CCCGATTTGCGCGTG CGGCG CCG CGTCG TTTTCCGTCACGCCG SRU_1470 1833714 - 1832599 - | ABC transporter ATP-binding protein glpK 1835355 - 1833775 - | glycerol kinase SRU_1472 1835926 - 1836711 + | transcriptional regulator, putative SRU_1473 1836791 - 1837816 + | hypothetical protein fbp 1837885 - 1838955 + | fructose-1,6-bisphosphatase SRU_1475 1839019 - 1839783 + | hypothetical protein TERM 1110 1840034 - 1840066 + G 71 -14 -2.82933 | overlap 1840035 CCGTTGTTCTCACAG GGACCGGCTCGGCC TTTTC GGCCGGGGCGGACC TATCCTCGCTTCGGG SRU_1476 1839811 - 1840665 + | enoyl-CoA hydratase/isomerase family protein SRU_1477 1840846 - 1842822 + | aconitate hydratase TERM 1111 1842845 - 1842883 + F 77 -13.2 -3.54424 | gap 1, overlap 1842847 TTGACTTAGCCGTGA GACGG-ACGGGGGAGCC CGCAGT GGCTTCCCCGTTCCGTA TTTGGGGGGCTCCGA TERM 1112 1842847 - 1842881 + F 84 -15.8 -3.35046 | gap 1, overlap 1842845 GACTTAGCCGTGAGA CGG-ACGGGGGAGCC CGCAGT GGCTTCCCCGTTCCG TATTTGGGGGGCTCC SRU_1478 1842935 - 1843744 + | hypothetical protein TERM 1113 1843860 - 1843837 - g 77 -12.4 -3.73072 | AAGCCGGGGAGGAAA CGGTCGACCG CATC CGGTCGAACG TGCAGGAAACCTTTA purM 1843788 - 1844801 + | phosphoribosylaminoimidazole synthetase SRU_1480 1844965 - 1845654 + | hypothetical protein SRU_1481 1845660 - 1846814 + | hypothetical protein SRU_1482 1847065 - 1847580 + | hypothetical protein TERM 1114 1848158 - 1848188 + G 72 -5.3 -4.4078 | overlap 1848161 1848172 CGGCGACAAGGCCAT CTACGACGCCATG GTGCG CATGGCGCAGTCG TTTTCGTTGCGGGCG TERM 1115 1849143 - 1849119 - g 72 -5 -4.44667 | overlap 1849121 GCCTCGAAGAACAAA GC-CGACGCCGC CCA GCGGC-TCATGC ACCGCTTCCAGCTCG SRU_1483 1847913 - 1850246 + | type II DNA topoisomerase, A subunit SRU_1484 1850303 - 1852234 + | type II DNA topoisomerase, B subunit TERM 1116 1852524 - 1852547 + F 100 -11.7 -4.43681 | AGCATGGCGTCGTCG CCGTCTCGG AAGGCC CCGAGGCGG TTTTCGTGTTGACTG SRU_1486 1852762 - 1853130 + | hypothetical protein SRU_1487 1854043 - 1853603 - | hypothetical protein TERM 1117 1853972 - 1853984 + g 93 -6.9 -5.24129 | opp_overlap 1853962, overlap 1853964 TAAGACCGAGTCCGT CGGGG ACG CCTCG TTTTTTGTCCGCGAC SRU_1488 1854656 - 1854270 - | hypothetical protein SRU_1489 1855916 - 1854852 - | hypothetical protein TERM 1118 1855824 - 1855767 - G 70 -10.7 -3.53224 | gap 3, opp_overlap 1855811 1855812 GACGCCGTCGTTAAA CACCGAGC-GAGCAATCTGGC-GGGC CAGGACGAC GCCCTGCC-GTTCGCTCCGCTCGGCG CTGGAGTCTTGGGCG TERM 1119 1856419 - 1856384 - H 90 -2.4 -5.51353 | gap 1, overlap 1856385 TAAAAAGAATAAAAA GCGGAGTCGCAGCGATG CCC CCT-GCTGCGGCTCGGT GGTAGAATGCCTTGC SRU_1490 1856622 - 1857776 + | hypothetical protein TERM 1120 1858649 - 1858671 + T 78 -5.4 -4.79752 | opp_overlap 1858649, overlap 1858655 TTGGTTGCCCAATCA TGCCGTGCGG GAT CTGCCCGCCA TTTTCTGTTATTGCA SRU_1491 1859614 - 1858832 - | protein nagD SRU_1492 1860062 - 1859688 - | hypothetical protein TERM 1121 1860159 - 1860178 + H 74 -4.8 -4.57353 | overlap 1860160 TGGAGGGCGAGGCCG GGGTGCGC GTGG GCGCTCCA TTTTGTGTCGTCCCG SRU_1493 1860181 - 1860852 + | hypothetical protein scpB 1860911 - 1861657 + | segregation and condensation protein B rluB 1861703 - 1862452 + | ribosomal large subunit pseudouridine synthase B guaB 1862465 - 1863991 + | inosine-5'-monophosphate dehydrogenase SRU_1497 1864039 - 1865109 + | aminopeptidase P, putative SRU_1499 1865444 - 1866586 + | hypothetical protein miaA 1867530 - 1866556 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1122 1866862 - 1866885 + g 73 -12.4 -3.40371 | opp_overlap 1866859 1866858 CTCGTCTAGAAGGCC CGCGTCGAGC ATCC GGTCGACGCG TTGGTTGATGCGGTC TERM 1123 1867658 - 1867631 - R 100 -22.8 -5.4492 | opp_overlap 1867627 GACACATATAAAAAA CCCGCCGTCGGA GAAT TCCGACGGCGGG CGAGTCGTTCCAGCC SRU_1500 1868530 - 1867709 - | xanthorhodopsin crtY 1869513 - 1868758 - | licopene beta-cyclase crtO 1871080 - 1869548 - | beta-carotene ketolase TERM 1124 1870069 - 1870082 + g 73 -5.9 -4.30576 | overlap 1870054 GGCACAGCAGCTGCA GGCCT GTTC GGGCC TTTTGGTCGTCGGCG TERM 1125 1871396 - 1871434 + H 70 -7.2 -4.07568 | overlap 1871397 1871399 TCGGGCGGGCCGCCC GGGGGGCCGCGCTGGC ATCCGGC GCCGCCGCCGCCCTCA TTTTCCGGGGACCGC TERM 1126 1871930 - 1871971 + G 84 -17.3 -3.16881 | gap 1 CCATCCATGCCCTCG CGGACGCCGGCGTCAGTCTC GTG GGGACGGACGCCC-CGTCCG TTGATCCGCTCGATA SRU_1503 1871524 - 1872162 + | cyclase superfamily protein TERM 1127 1873389 - 1873370 - g 72 -5.7 -4.30576 | gap 1, opp_overlap 1873378, overlap 1873372 CCTGTATCACGAAAA CG-CCGAG CTCGC CTCGGGCG ATTTCCACGAAATTG SRU_1504 1872459 - 1873673 + | hypothetical protein SRU_1505 1873808 - 1874716 + | phage integrase domain/SAM domain-containing protein TERM 1128 1875833 - 1875807 - g 72 -15.1 -2.73364 | GCGCGACCTGAAGGA CCGCCCGGACC TGAAC GGCCCGGACGG GCGGCCCGGCGGCCA SRU_1506 1875379 - 1876314 + | tyrosine recombinase xerC SRU_1507 1877235 - 1876321 - | hypothetical protein TERM 1129 1877157 - 1877185 + g 70 -2.3 -4.62471 | overlap 1877159 1877171 AACGGGACCACACCC GATGATTGAGGGC GCG GCCGTCAATAGAC TTTTTGGCCGTTAGG SRU_1508 1877635 - 1877264 - | hypothetical protein TERM 1130 1877678 - 1877663 - R 78 -4.6 -4.77165 | GGGGTGAGAAGAAAA CGGTTC AGTC GTACCG GTTCAGTTGTGCTGG SRU_1509 1878709 - 1877681 - | zinc-binding dehydrogenase family oxidoreductase TERM 1131 1878414 - 1878404 - G 77 -6.8 -4.55128 | AGGCTGAAACGAAAA GACG GTG CGTC CCTCCCACTCAGCGT SRU_1510 1880126 - 1878759 - | riboflavin-specific deaminase/GTP cyclohydrolase II TERM 1132 1880198 - 1880159 - H 95 -10 -4.66987 | gap 1, opp_overlap 1880183, overlap 1880163 GAGATCGGAATAAAA GGAACCAC-CACCGGCCGT TGG ACGGCCAGCGTATGGCTGC TTACAAGGGCCAATC TERM 1133 1880194 - 1880163 - H 81 -11.6 -3.82261 | gap 1, opp_overlap 1880183, overlap 1880159 TCGGAATAAAAGGAA CCAC-CACCGGCCGT TGG ACGGCCAGCGTATGG CTGCTTACAAGGGCC TERM 1134 1881233 - 1881223 - g 72 -8.2 -4.13945 | ACCCGCACTCCAAAA GGCC AAG GGCC GGGTCTCCGAAGCCC SRU_1511 1880528 - 1881343 + | hypothetical protein TERM 1135 1881834 - 1881867 + G 73 -13.1 -3.25356 | gap 1, overlap 1881848 GCGGATGCTCGGGGG GCCGGTCGTGCTCGTC GGG GCCGAGC-TGGCCGGC TTCGATTCATTCTAC SRU_1512 1881385 - 1882425 + | HTH-type transcriptional regulator celR purC 1882537 - 1883511 + | phosphoribosylaminoimidazole-succinocarboxamide synthase SRU_1513 1884353 - 1883508 - | carbon-nitrogen family hydrolase SRU_1515 1885079 - 1884579 - | anti-oxidant AhpCTSA family protein SRU_1516 1886490 - 1885132 - | permease TERM 1136 1885226 - 1885215 - G 72 -5.8 -4.39166 | CCCCACACAGGAAAA CGGT CACG ACCG CCACGAGCAAGAAGT TERM 1137 1885433 - 1885457 + g 87 -7.1 -5.02074 | CCCGAGGTGCCCAGC CCCTTGAGAAT GCC AATCTCACGGG TTTTTTCGAGAATCA TERM 1138 1886143 - 1886112 - G 72 -13 -3.16564 | gap 1 CCTTCATTTCATGAA GCTGGCGTCGGAGCG ACG CGCCCCGAT-CCAGC GGCTCGTCCTGAACG TERM 1139 1887213 - 1887225 + G 83 -2.6 -5.18726 | GCCGGCCTCTCGATC CGTG TACTC CGCG TTTTTCTTCTACAAG pruA 1886563 - 1888251 + | 1-pyrroline-5-carboxylate dehydrogenase SRU_1518 1888315 - 1888785 + | hypothetical protein SRU_1519 1888812 - 1889792 + | transcriptional regulator, GntR family protein SRU_1520 1892427 - 1889800 - | hypothetical protein TERM 1140 1891824 - 1891804 - G 78 -14 -3.59979 | TCCGCCCACCTCAAA GGCCGCCT CAAGC AGGCGGCC ATGCAGACGGGACGA TERM 1141 1892518 - 1892546 + r 71 -6 -4.25848 | overlap 1892520 1892523 GACAGCCTGAATGCA TACAGGGAGGGA GAGGA TCCTTCCGTGTG TTTTCCTAACCGCTT SRU_1521 1893735 - 1892560 - | hypothetical protein TERM 1142 1894032 - 1893999 - R 100 -19.6 -5.08255 | ACCTGCAAAAGAAAA GGCCGTTCCGCCGG CAAAAT CCGGGGGAACGGCC TCAGATACCTGGAAG SRU_1523 1895471 - 1894245 - | OsmC-like protein SRU_1524 1896285 - 1895506 - | hypothetical protein SRU_1525 1896928 - 1896350 - | rRNA methylase TERM 1143 1896443 - 1896478 + g 80 -15.4 -3.2614 | gap 1, overlap 1896446 AAACTGCGCCTGCGG GAGGGCCGACGCCCAGG CCT CCACGGCGTCGGCC-TC TTCGTCTCCCCCCTC TERM 1144 1896446 - 1896476 + g 86 -18.2 -3.19602 | overlap 1896443 CTGCGCCTGCGGGAG GGCCGACGCCCAGG CCT CCACGGCGTCGGCC TCTTCGTCTCCCCCC aroB 1897074 - 1898177 + | 3-dehydroquinate synthase SRU_1527 1898388 - 1903112 + | hypothetical protein TERM 1145 1905118 - 1905093 - g 71 -3.2 -4.63527 | overlap 1905110 CGAGTACGTGAAAAA CCACGTCG GCGAAGAATT CGACGGGG TCGTCAGCGGCGTGA TERM 1146 1905300 - 1905255 - g 91 -11.9 -4.17048 | TCGGGGCGAAAACAA CGGCACCTCCTAC-CGGCCCG GCGATT CGGTCCGTGT-GGAGGTGGCG AGCGCCAGCGTCGAG rnr 1903348 - 1905348 + | ribonuclease R SRU_1529 1906748 - 1905414 - | hypothetical protein SRU_1530 1907942 - 1907187 - | PAP2 superfamily protein recA 1909010 - 1907949 - | recA protein TERM 1147 1908501 - 1908539 + g 73 -12.4 -3.35679 | GCTCATGAGGCGGGC CTGCAGGCCGACATGGGT GTC GCCCATGTCCCCCTCCAG TTCTGCCTGCGGCAC TERM 1148 1908968 - 1908978 + g 86 -4.6 -5.19998 | overlap 1908931 TTTGCTCAACGGCGA GGTC GAG GGCC TTTTCTTTTGCTTCT SRU_1532 1909962 - 1909231 - | hypothetical protein TERM 1149 1909861 - 1909827 - G 70 -10.7 -3.53811 | gap 1 GCGAGGTCCCGTAAA TGGGGCGCCGGGTCGT GACG ACGAGCCGG-GCCCGA AACTCGGACAGACTA TERM 1150 1910510 - 1910543 + GH 100 -13.7 -4.56597 | GCACGGCAATCCGGC CGCGGCCGCCCGGCG CTCT CACCGGGTGGTCTCG TTTTTCGCCCGGGAA SRU_1533 1910382 - 1911173 + | hypothetical protein TERM 1151 1912941 - 1912962 + GF 71 -2.8 -4.58943 | opp_overlap 1912941 GTCCCTGCACACAAC CCCGGACG CACGTT CGAACGGG TTCTTTTTGTCTCAG SRU_1534 1911109 - 1913289 + | hypothetical protein TERM 1152 1913823 - 1913798 - g 72 -4.8 -4.57073 | gap 2 GACTTTCTCGAAAAA GGCTT-C-GACG AGTA CGTCAGCAAGCC CTTCACCCGAGACGA SRU_1535 1913339 - 1913878 + | response regulator TERM 1153 1913924 - 1913902 - T 100 -17 -4.96848 | overlap 1913916 CGGGGTACAGAAAAA GCCCAGGGCC AGA AGCCCTGGGC TCGACTGGGCGGCCC SRU_1536 1914512 - 1913970 - | hypothetical protein TERM 1154 1914686 - 1914663 - H 76 -8.1 -4.13767 | opp_overlap 1914681, overlap 1914664 1914666 GTCCCGACTCGAAAA CGAGGCACC AAAATG GGTGCCTCT CGGGCCTTCTCTGCA SRU_1537 1914840 - 1915400 + | hypothetical protein SRU_1538 1915893 - 1916843 + | glycerophosphodiester phosphodiesterase SRU_1539 1917978 - 1916857 - | putative DNA polymerase IV TERM 1155 1918205 - 1918225 + r 93 -7.6 -5.00616 | overlap 1918196 CCACCACGCGTGCCT CGTTTCAG GACCA CTGAGACG TTTTTTGCAACGAGA SRU_1540 1919397 - 1918501 - | hypothetical protein TERM 1156 1920071 - 1920088 + H 84 -8.4 -4.48987 | TTCTTGAGCTCGAAC GGCAGG CCCGTC CCTGCC TTTTGGTTCTCCCAG SRU_1541 1920243 - 1920893 + | hypothetical protein SRU_1542 1922560 - 1921112 - | hypothetical protein TERM 1157 1922906 - 1922883 - R 100 -10.3 -4.93365 | CCCCACAACTAAAAA GCCCCTCAG GCGACG CTGAAGGGC GATGTTCGAAGTGTA alaS 1926036 - 1923136 - | alanyl-tRNA synthetase TERM 1158 1923906 - 1923922 + g 75 -4.3 -4.67982 | overlap 1923860 1923908 TGGGCACGTCGCGCG CCTCCTG CTT CGGGATG TTTTGTTGGATCGCG TERM 1159 1924883 - 1924910 + g 100 -12 -4.42386 | gap 1, overlap 1924885 ATGAACTCCTGCTGC TCGGCGAGCCCGT CGA ACGGGC-CGCCCA TTTTCTCAATCAGCG TERM 1160 1924885 - 1924908 + g 71 -14.6 -2.54745 | gap 1, overlap 1924883 GAACTCCTGCTGCTC GGCGAGCCCGT CGA ACGGGC-CGCC CATTTTCTCAATCAG TERM 1161 1925767 - 1925791 + g 73 -12.1 -3.39327 | CTCCTCCAGGTCGTT GTGCTTGCCGG AGA CCCGCAGGCAC TTCTGCGTGTCGACG SRU_1545 1926918 - 1926298 - | DNA-3-methyladenine glycosylase TERM 1162 1926468 - 1926439 - G 88 -7.7 -5.00616 | opp_overlap 1926446, overlap 1926442 CCCGTCGGCAAAAAA CAGCGGACGGGCC GTCA GGCGCGTCTGGTG AAACTCGCCGTCAAT SRU_1546 1926998 - 1927939 + | hypothetical protein SRU_1547 1929150 - 1927960 - | acetyl-CoA acetyltransferase SRU_1548 1931313 - 1929208 - | hypothetical protein TERM 1163 1929284 - 1929327 + g 77 -16 -3.05384 | gap 1, overlap 1929291 TCACACCGGAACGCC TCGCAGACGTACGCGG-CGGC CCG GCCGTCCACGGGCGTTTGCGA TTCCGTAAACGGGGC TERM 1164 1930004 - 1929984 - G 73 -3.8 -4.59773 | overlap 1929985 1929986 GGGCATCGTCAAAAA CGCGGGCG GCCTT CGCGAGCG CCGCCGTCATAAGGC TERM 1165 1930146 - 1930183 + g 71 -3.4 -4.59773 | gap 3, overlap 1930142 1930143 CCATTCCTCGCTGCT CG-GC--CGCCGCGGCGAG GGA CTGGTCGCGGTGCAGCACG TTTTTGCCGGTCCGC SRU_1549 1934089 - 1931366 - | zinc-dependent carboxypeptidase domain-containing protein SRU_1550 1935508 - 1934090 - | hydroxypyruvate reductase SRU_1551 1935430 - 1936722 + | hypothetical protein TERM 1166 1936909 - 1936881 - g 70 -3.8 -4.56597 | gap 1 GCCCGCGCCGAAAAA TCGATCGGC-CGC CTGC ACGTGCTGACCGA CTTCCACCTTCAGCA thiE 1936836 - 1937519 + | thiamine-phosphate pyrophosphorylase hemD 1938309 - 1937521 - | uroporphyrinogen-III synthase TERM 1167 1937754 - 1937719 - G 78 -6 -4.57569 | opp_overlap 1937739 GGACGGGCTGAAAAA GACGAGCCAGGACG CCCTCCCC CGCGCCGGCACGTC GAGATCAGTGCGGGC TERM 1168 1938076 - 1938040 - G 73 -10.7 -3.64703 | TTCGTGGGACGCAAA CACCTGTTCGAGGGCGA CAG TGGCCCGCGGACTGGTG GCGAGGAGCCCCGCG hemC 1939281 - 1938310 - | porphobilinogen deaminase hemA 1940852 - 1939392 - | glutamyl-tRNA reductase mtnN 1941748 - 1940918 - | MTA/SAH nucleosidase TERM 1169 1941032 - 1941086 + g 72 -13.5 -3.14132 | gap 1, overlap 1941035 CTCGAAGTCGACGTC GGACGTGCCGT-CCGCATGGTCCGAG ATGG CCCGCACCACGAGGTACGGCACGTCG TTCATCGCGCAGACC metG 1944429 - 1942288 - | methionyl-tRNA synthetase TERM 1170 1942748 - 1942728 - G 72 -13.9 -3.02144 | CGATTTTCTGGAAGA GCGGCTCCG GGT CGGGGCCGC TCGGGATCGGGTGTC SRU_1558 1945081 - 1944602 - | hypothetical protein hisB 1945096 - 1945704 + | imidazoleglycerol-phosphate dehydratase proC 1945831 - 1946649 + | pyrroline-5-carboxylate reductase hisH 1946733 - 1947389 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit SRU_1562 1947557 - 1947429 - | hypothetical protein TERM 1171 1947626 - 1947592 - R 76 -6.2 -4.62872 | ACGAATGCCCAAAAA GGGTGCCAACGCGCAC AGT GCGCGGATCCGCCCCC ATTCAGGATTCTCAG TERM 1172 1947746 - 1947725 - R 100 -15.1 -5.7946 | opp_overlap 1947721 1947726 CCCCCAACAAAAAAA GCCCGCCCC GGAA GGGACGGGC TCGGGTCTTCTCGCA SRU_1563 1948268 - 1947777 - | putative cold shock-like protein cspG hisA 1948281 - 1949057 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 1949098 - 1949904 + | imidazoleglycerol phosphate synthase, cyclase subunit SRU_1566 1949954 - 1950211 + | putative ABC transporter permease protein SRU_1567 1950730 - 1950215 - | hypothetical protein SRU_1568 1950792 - 1951331 + | 2'-5' RNA ligase SRU_1569 1951443 - 1952084 + | Outer membrane lipoprotein carrier protein LolA TERM 1173 1952840 - 1952815 - g 81 -12.5 -3.85817 | opp_overlap 1952831 ATGTCGTTCCAGAAA GGGATGGCCAC ACTG GTGGCCTCCCC CCGCCGCGGGGCCAT SRU_1570 1952143 - 1953333 + | hypothetical protein TERM 1174 1953586 - 1953552 - g 78 -13.7 -3.5032 | overlap 1953550 GGTCGACATCAAAGA CG-GCATGCCGCAGGGC AAG GCCCT-CGACATGCGCG AATCGAGCCCCATCC TERM 1175 1953741 - 1953729 - g 72 -4.8 -4.56597 | CCTGCTGGCCAAAAA CACG GAGAT CGTG GGCGGGGTCACGGAG mdh 1953448 - 1954392 + | malate dehydrogenase, NAD-dependent TERM 1176 1954406 - 1954435 + TF 77 -14.3 -2.87564 | opp_overlap 1954397 AGACCAGCGCGGGAT GGACGGGGGGGAT GCCC GTCCTCCTCGTCC TATCTCCGCACCTCG SRU_1572 1955409 - 1954435 - | cation efflux family protein TERM 1177 1956329 - 1956290 - gH 82 -11.5 -4.03234 | gap 2 CGTCCTGCAGACAAA CGCCCAC-TG-GACGGACG ACCA CGCCCGTCGCATGCAGGCG CGGCTCGACCTCGAT SRU_1573 1955355 - 1956674 + | glyoxalase family protein TERM 1178 1957226 - 1957198 - gfH 70 -12.4 -3.16564 | gap 1, opp_overlap 1957189 1957222 CTGGCAGGTGATGAA GGCCCTCGGC-CG GCAG CGCGCCGAGGGCT GGACGCCCTTTCACG SRU_1574 1956716 - 1957717 + | aldo/keto reductase family oxidoreductase SRU_1575 1957677 - 1958258 + | hypothetical protein msrA 1958446 - 1959138 + | methionine-S-sulfoxide reductase TERM 1179 1959536 - 1959570 + F 86 -12.9 -4.0162 | overlap 1959526 AGTGCAGTCCGTCGA CGAC-GCGGGACGGACG TTG CGTCCG-CCGGCTGTCG TTTGTAGTATCAGGA SRU_1577 1959632 - 1961173 + | transporter SRU_1578 1961610 - 1961188 - | PilT domain-containing protein SRU_1579 1961877 - 1961617 - | hypothetical protein TERM 1180 1963071 - 1963054 - g 70 -11.3 -3.61715 | CACGCCCTCGAAGAA CTGCTCC GGCA GGAGCAG GGACACCAGGTCCCG TERM 1181 1963857 - 1963824 - g 81 -16.7 -3.14229 | gap 1, overlap 1963812 1963822 AGAGGCCGACGAAGA GGCCCTGGCCGAGGTC GTG GGCC-CGGCCAAGGCC GAGACCATCACGGAC uvrC 1962016 - 1963917 + | excinuclease ABC, C subunit SRU_1581 1964053 - 1964385 + | hypothetical protein SRU_1582 1966141 - 1965323 - | hypothetical protein SRU_1583 1966394 - 1966158 - | hypothetical protein TERM 1182 1967787 - 1967815 + G 71 -14.6 -2.65298 | gap 1, opp_overlap 1967786, overlap 1967786 GCCGCCACCCAACAG GCCTCGTCG-GCG GGGC CGCGCGGCGAGGC ATTCTACTGGCTCGG TERM 1183 1969394 - 1969360 - g 72 -11.4 -3.57144 | gap 1 CGTCGGATGGGGAAA CCGGCG-CCGAGGCG CTGTAC CGCCTCGGGCGGCAG CTTCGGCGGCAGGGA TERM 1184 1969523 - 1969499 - g 72 -14.2 -3.01712 | GGCGCTGCTCGAACA GGCCCGGGCG TACCG CGCCCGGGGC GAGACCGGCCAGGCC SRU_1584 1966434 - 1969628 + | TPR repeat-containing protein TERM 1185 1970899 - 1970859 - g 77 -13.2 -3.55444 | gap 1 GCCCCACCCTCGAAA CGACCCACGCG-GAGGGGG GCCT CACCCTCACGCGCGGCCCG GTGCGGATGAAGGCC TERM 1186 1971131 - 1971184 + G 70 -3.5 -4.56597 | gap 1 CCCATTCCGAACTTT GCCGCCGTCACC-GCGGACGCCCTCG TCA CGGTCTCATTCGCAGGGGGCGACGGC TTTTTGAAGGCCCAC SRU_1585 1969685 - 1971412 + | hypothetical protein TERM 1187 1971618 - 1971636 + F 73 -6.6 -4.27316 | overlap 1971619 CGGAAACGCCGTAGA GGTGCCGG GCC TCGGCACG TTTTCCGTTGAGCAC SRU_1586 1971844 - 1972602 + | hypothetical protein SRU_1587 1972678 - 1973370 + | putative biopolymer transport protein SRU_1588 1973418 - 1973825 + | ExbD/TolR family protein SRU_1589 1975597 - 1974047 - | Mg chelatase-like protein TERM 1188 1976134 - 1976080 - R 93 -18.7 -3.18239 | gap 3, overlap 1976083 TACATACTGCATGAA CCAGAGG-CGCCGTGGCACGGGGCGC GGGGAT GCGCCCCGTG-C-CGGCGTCCTCAGA GGGGACGTCGACAAC TERM 1189 1976131 - 1976083 - R 91 -21.2 -2.78725 | gap 3, overlap 1976080 ATACTGCATGAACCA GAGG-CGCCGTGGCACGGGGCGC GGGGAT GCGCCCCGTG-C-CGGCGTCCTC AGAGGGGACGTCGAC SRU_1590 1976791 - 1976222 - | auracyanin A precursor SRU_1591 1977161 - 1977979 + | hypothetical protein SRU_1592 1978979 - 1978218 - | menaquinone biosynthesis methyltransferase ubiE SRU_1593 1979687 - 1978995 - | hypothetical protein SRU_1594 1982268 - 1979647 - | cation-transporting ATPase pacS TERM 1190 1980196 - 1980223 + gH 70 -12 -3.16564 | gap 1 GCCCAGGGTGTGCAG GGCGTCGAGCGCC GCG GGCG-TCGACTCC TTAATGGGGTCGGCC SRU_1595 1982392 - 1982880 + | hypothetical protein TERM 1191 1984265 - 1984286 + G 81 -5.7 -4.82901 | overlap 1984270 CCGCAGGAGTCGACT GGACCGGTC GTTG GAACGGCCC TTTTTGTCGGAAAAC SRU_1596 1983798 - 1984955 + | FAD dependent oxidoreductase, putative SRU_1597 1985998 - 1985006 - | SUA5 protein SRU_1598 1986077 - 1986541 + | hypothetical protein SRU_1599 1988890 - 1987073 - | CBS domain-containing protein TERM 1192 1987419 - 1987440 + g 70 -10.1 -3.65542 | overlap 1987408 AGCCGGTGCTCTTCG TCCTCCACG AGGA CGTGGCGGA TCTTTTGCCAGTCCA TERM 1193 1989101 - 1989078 - g 73 -6.6 -4.36914 | TTGTTGGCTACAAAA CGACGCACCC CACC GGACTCGTCG GCCGGAAGGAGTTCC TERM 1194 1989684 - 1989646 - g 70 -10.8 -3.53012 | GGCGCCTCGCCGAAA TGCAGCGGGCTGCTGGGG ACC CGGCCGCAGCCCTCCGCA CCTACCAGCAGCTTC TERM 1195 1990191 - 1990230 + G 72 -14.3 -3.0395 | overlap 1990182 GCAGCGACAGCCTCG TCCCCGCC-CGACACCGCA CAGC TGCGG-GCCGCGGCGGGGG TGTTGCGGGATGTCT SRU_1600 1989045 - 1991042 + | TPR repeat-containing protein TERM 1196 1991148 - 1991167 + G 76 -2 -4.91511 | overlap 1991150 1991151 CTCCCGTGCGCTCCT GCTCACAC TGAC GTGTGCTC TTTTTCTCATCGGAT SRU_1601 1991107 - 1991898 + | hypothetical protein SRU_1602 1991958 - 1993196 + | M23 peptidase domain-containing protein TERM 1197 1993711 - 1993653 - g 93 -9 -4.87665 | gap 4, overlap 1993656 CCTGATGCAGAAAAA CGACATCGACG-TG--CTGCGCGGCCACGG CCG CC-TGACCGCGCCGGACACCGTCGAGATCG AGCCGTCGGTCAACA lpdA 1993285 - 1994754 + | dihydrolipoamide dehydrogenase TERM 1198 1994781 - 1994806 + T 100 -16.9 -5.7946 | opp_overlap 1994781 ATTTCAGCACTCAAA GCCCCGTTCTC TTCG GAGAGCGGGGC TTTTTTTGTTGCGCC TERM 1199 1994806 - 1994781 - T 88 -14.7 -3.68529 | opp_overlap 1994781 ATTTCAGCACTCAAA GCCCCGTTCTC TTCG GAGAGCGGGGC TTTTTTTGTTGCGCC SRU_1604 1997027 - 1995378 - | aminopeptidase M1 family protein TERM 1200 1996235 - 1996218 - G 71 -9.1 -3.86015 | gap 1 CACCTGGTCCAGAAA GCCCG-GC AGG GCGCGGGC GGCCCGGGCCGAGTC SRU_1605 1997635 - 1997084 - | DnaJ-like subfamily B protein TERM 1201 1997550 - 1997580 + g 71 -9 -3.78775 | TGGTCGGGGTGGCAC TCCAGCGCGCGT CGGCGGA ACGCGTGCTTGA TTTCCTCCTGGGACG mutS 2000449 - 1997723 - | DNA mismatch repair protein TERM 1202 1999665 - 1999679 + g 72 -7 -4.23758 | overlap 1999666 TTGATCTTGCGGACG TGGGGC AGC GCCCCC TTTTGCGTCTCGCCT TERM 1203 1999867 - 1999847 - G 70 -11.1 -3.59979 | opp_overlap 1999848 1999849 CTCGGTCACGGTAAA CGGCACCTC CCG GAGGTGCTG CTGGAGGCGCTCTGT SRU_1607 2001965 - 2000664 - | DnaJ domain-containing protein TERM 1204 2001369 - 2001381 + g 73 -4.1 -4.68724 | overlap 2001364 2001362 GTCCACCGGTGAAGG GTTGT GCC ACGAC TTTTCTCTTCGGTAA SRU_1608 2002641 - 2001952 - | hypothetical protein SRU_1609 2003019 - 2003810 + | ATP-NAD kinase, putative TERM 1205 2003949 - 2003985 + F 100 -20.1 -4.86731 | overlap 2003950 CCCCTGACCACCCCG CCCCCGCTTTTCGCCGC CCA GCGGCGCAGAGCGGGGA TTTTATTTGGGACGG TERM 1206 2003950 - 2003984 + F 100 -23.6 -3.51557 | overlap 2003949 CCCTGACCACCCCGC CCCCGCTTTTCGCCGC CCA GCGGCGCAGAGCGGGG ATTTTATTTGGGACG TERM 1207 2004060 - 2004018 - f 74 -6.2 -4.4261 | overlap 2004012 2004019 GCTTCAACACGAAAA CGCGGCCGCCGTCGATC-GC ATTCG GCAGGCCGAGAGCGGC-GCG CTTCCGATTCCGGGT fumC 2004285 - 2005691 + | fumarate hydratase TERM 1208 2005735 - 2005771 + F 81 -12.9 -3.68222 | gap 1 CTGTAGCGTGGGTGC CGC-GGCCGGCCGGGG CACTTC CCCCGGCAGCCCCGCG TTGTTACAATTCCCA htrA 2006031 - 2007482 + | serine protease TERM 1209 2007495 - 2007552 + F 74 -2.7 -4.86902 | gap 4, opp_overlap 2007487, overlap 2007497 2007498 2007499 TAACCCAGGGCCGAT CCTGC-C-CCAC-AG-GCGCCCCATCCTC CCCC GAGGGTGGGGCGTTCACGTGGAGTGCTTG TTTTCTTCTCATTTC TERM 1210 2007498 - 2007549 + F 81 -7.4 -4.5028 | gap 4, opp_overlap 2007487, overlap 2007497 2007495 2007499 CCCAGGGCCGATCCT GC-C-CCAC-AG-GCGCCCCATCCTC CCCC GAGGGTGGGGCGTTCACGTGGAGTGC TTGTTTTCTTCTCAT SRU_1613 2007546 - 2007836 + | hypothetical protein TERM 1211 2007984 - 2007935 - f 74 -5.1 -4.56597 | gap 4, overlap 2007940 2007941 CCGTGGCCGGAAAAA CACAATGGCCTCCGGAGGG-CCGCC GACC GGCCGTCCCGCCGGAGG--AT-GTG CGGTCATACCTCGGG gldA 2008079 - 2009173 + | glycerol dehydrogenase SRU_1615 2009975 - 2009433 - | hypothetical protein TERM 1212 2010768 - 2010782 + G 70 -11.4 -3.42056 | opp_overlap 2010770 CGGGTTCCGCGACAT GACGCG CAT CGCGTC TTCTCCCTTCGACGT tyrA 2010058 - 2011203 + | prephenate dehydrogenase gcvT 2011330 - 2012454 + | glycine cleavage system T protein SRU_1618 2012526 - 2013245 + | hypothetical protein TERM 1213 2014530 - 2014509 - g 77 -13.7 -3.40403 | CCCCGCCGACGAGAA CGCCAGCTC CGAT GAGCCGGCG GCACCCGCCCCCGAC ftsK 2013502 - 2016165 + | ftsk/SpoIIIE family protein TERM 1214 2016570 - 2016597 + G 88 -16.2 -3.68351 | opp_overlap 2016564 2016562 GCAGAAACAGCACCT CGCCGACGCCGG GTGC CCGGTGCCGGCG TTTGCGTGCTGCGAA TERM 1215 2016803 - 2016779 - g 74 -12.1 -3.55444 | overlap 2016780 GCGCGATGGTCGAAA CGTTCGCGGAC TTT GCCCGCGAACT CGCGGTGCAGGTGGC TERM 1216 2016802 - 2016780 - g 75 -15.6 -2.73124 | overlap 2016779 CGCGATGGTCGAAAC GTTCGCGGAC TTT GCCCGCGAAC TCGCGGTGCAGGTGG TERM 1217 2016984 - 2016997 + G 70 -2.3 -4.62069 | overlap 2016987 GGAGGGGGTGGGCCT GATCG CCGT CGAGC TTTTTGAAATGCCCG purK 2016238 - 2017377 + | phosphoribosylaminoimidazole carboxylase, ATPase subunit purE 2017516 - 2018028 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit SRU_1622 2018100 - 2020133 + | lysyl endopeptidase precursor tyrS 2021434 - 2020196 - | tyrosyl-tRNA synthetase TERM 1218 2021399 - 2021377 - G 73 -13.4 -3.28712 | opp_overlap 2021374 2021371 CGTCTTCCGGGACAA TCTCCTCCGC CCC GCGGCGGAGA ACCGTCATCTGCTCG smpB 2021959 - 2021495 - | SsrA-binding protein SRU_1625 2022944 - 2022129 - | hypothetical protein rplS 2023367 - 2023011 - | 50S ribosomal protein L19 trmD 2024154 - 2023429 - | tRNA (guanine-N1)-methyltransferase rimM 2024796 - 2024200 - | 16S rRNA processing protein RimM rpsP 2025443 - 2024826 - | ribosomal protein S16 ffh 2026900 - 2025515 - | signal recognition particle protein TERM 1219 2025699 - 2025716 + g 70 -10.5 -3.63627 | CTCCCCCGGGCGATG CGGCGCC GACG GGTGCCG TTTAGAATGTCCGGG SRU_1631 2027252 - 2027839 + | 5-formyltetrahydrofolate cyclo-ligase TERM 1220 2028122 - 2028140 + G 72 -7.3 -4.17657 | CCTGAGCGAACTCGG GGCCTGG ACCGG CCTGGCC TTTTCCGGTCTCATC SRU_1632 2027883 - 2028554 + | PspC domain-containing protein SRU_1633 2029747 - 2028566 - | peptidase M16 inactive domain-containing protein TERM 1221 2029421 - 2029405 - G 79 -7.9 -4.56597 | opp_overlap 2029405 GCCCCTCGGGAAAAA GGCGCTG CGA CAGGGCC GTGGAGGCCTGCGCC SRU_1634 2031398 - 2029968 - | protease, putative polA 2034184 - 2031404 - | DNA polymerase I SRU_1636 2034444 - 2035121 + | HAD superfamily hydrolase SRU_1637 2037910 - 2035196 - | PAS domain-containing protein TERM 1222 2035388 - 2035378 - G 70 -2.4 -4.59853 | opp_overlap 2035358 GGAAGGGCTCAAAAA GGCC CTC GGCG GTTTCGGGGTCCATG TERM 1223 2035456 - 2035487 + g 75 -13.6 -3.35522 | opp_overlap 2035435, overlap 2035452 2035458 CCTCCTCGCGGTACG TTCGGAGGCGGACG CGCC CGCCCGCCTCCGTG TATTTAACGGCATTG TERM 1224 2035458 - 2035485 + g 93 -18.4 -3.24411 | opp_overlap 2035435, overlap 2035456 2035452 TCCTCGCGGTACGTT CGGAGGCGGACG CGCC CGCCCGCCTCCG TGTATTTAACGGCAT TERM 1225 2038248 - 2038264 + H 78 -2.9 -5.07486 | overlap 2038251 ATGACCGAACCCAAC CAACCGT CTG ATGGCTG TTTTTCTTCCGGGTC purN 2038685 - 2039338 + | phosphoribosylglycinamide formyltransferase TERM 1226 2040256 - 2040207 - g 77 -13.5 -3.57144 | gap 1, opp_overlap 2040251 TGTGCGATCCTCAAA CACACCAACCCCAGCGGCGTCGCC ACC GCCGACACC-CTGGAGGAGGCGTG GCACCAGGCCTTTGC TERM 1227 2040473 - 2040447 - g 81 -14.5 -3.53012 | gap 1 GTCGTCCGGGCCAAA CAGCCGGCTCGG GGCA CCGA-CCGGCTG GACGTCCGCTCCGTG TERM 1228 2040773 - 2040785 + G 71 -3.3 -4.70879 | overlap 2040774 CACCGGCTCCGTGGT AGCGT CCG ACGCA TTTTTCCCGTTTGCC purH 2039358 - 2040944 + | bifunctional purine biosynthesis protein PurH TERM 1229 2041481 - 2041452 - g 78 -10 -4.11692 | CACGGAGGTCGAAAA GCGCGC-CGTGCGG GACT CCGC-CGAGCACGC TGGGGCCCGGAAGGT SRU_1640 2041111 - 2042118 + | regulator of ftsI, penicillin binding protein 3, septation function TERM 1230 2042267 - 2042257 - g 72 -6.8 -4.18494 | GATGCTGACCCAAAA CCAG CCG CTGG TGCGCTCCCTGCGGG SRU_1641 2042243 - 2042995 + | cell shape-determining protein MreC, putative SRU_1642 2043142 - 2043783 + | ATP-dependent protease peptidase subunit TERM 1231 2043940 - 2043959 + G 70 -6.4 -4.21974 | overlap 2043942 ACGACAGGCCGCCAT GTTTGTCG ACTA CGACAATC TTTATTCCATCCTCA SRU_1643 2043890 - 2044999 + | hypothetical protein hslU 2045059 - 2046504 + | ATP-dependent protease ATP-binding subunit SRU_1645 2046526 - 2046891 + | phosphoribosylaminoimidazole carboxylase ATPase subunit, putative SRU_1646 2047829 - 2046927 - | hypothetical protein paaY 2048537 - 2047881 - | carbonic anhydrase SRU_1648 2048509 - 2049567 + | domain of unknown function, putative TERM 1232 2049644 - 2049618 - TR 100 -15.9 -4.80455 | opp_overlap 2049616 2049615 GATTCAAACACAAAA CCCTCGGACGC ACCTG GCGTCCAAGGG GCAATTTTCTGTAGA SRU_1650 2050766 - 2049795 - | DedA family protein, putative TERM 1233 2050109 - 2050098 - GTR 73 -3.6 -4.65895 | GGCCCCACTTAAAAA GCGA TTGG CCGC GATGACGCCGTAGCC ispF 2050966 - 2050493 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase SRU_1652 2051711 - 2050995 - | hypothetical protein SRU_1653 2052850 - 2051801 - | queuosine biosynthesis protein TERM 1234 2052378 - 2052411 + g 70 -3.7 -4.46212 | gap 1, overlap 2052381 ACCTCGCGATCGATG TAGGGCGGCAGCGGGG TCT CCCCGATGTC-CCGGA TTTTCTGGTACAGCG TERM 1235 2052980 - 2052996 + r 80 -5 -4.83169 | overlap 2052981 2052985 TTCGGGCCGAGTTGA TCCCGC TCCAC GCGGGC TTTTTATGCGGGCGT SRU_1654 2053972 - 2053016 - | hypothetical protein SRU_1655 2055828 - 2054038 - | glutamyl-tRNA(Gln) amidotransferase subunit A TERM 1236 2054933 - 2054962 + g 84 -7.1 -4.77036 | GGCCCCGCCGACGAG CCGCTGGAGCC CTGGTCGA GGTTCCAGGGG TTTTTGGTGGTGGCG TERM 1237 2055724 - 2055693 - G 73 -4.2 -4.59773 | gap 1 GGGCACCGGGAAAAA GGCCGCTCAGCCCGA CCG CCGTGCAG-GCGTCC AAAAACTGGCGTCGA TERM 1238 2056283 - 2056267 - R 85 -3.5 -5.26119 | GTCCCAAAAAGAAAA GCCCCTG GGC CTGGCGC GACGGTGCCCGCAAC SRU_1656 2056926 - 2056324 - | hypothetical protein ylnA 2058228 - 2056975 - | anion permease prfC 2060081 - 2058480 - | peptide chain release factor 3 TERM 1239 2059671 - 2059710 + g 75 -13.6 -3.40299 | opp_overlap 2059668 CTTGTTGACGAAGGT GATGATGGGGGTGTCCTG CATC CGGCACACCTCCATCAGC TTCTCCGTCTGCTGC SRU_1659 2062089 - 2060815 - | hypothetical protein TERM 1240 2061263 - 2061249 - G 72 -5.6 -4.32034 | overlap 2061251 GGATCACGACGAAAA CCCCCA GAA TGGGCG CCCAGACGGTCAGGA SRU_1660 2062988 - 2062143 - | hypothetical protein TERM 1241 2063165 - 2063203 + r 70 -10.4 -3.61715 | CGCTCAACGTCGTCC CGAACTCCCTTCCG-CAC GACCG GCGCCGGAAGGG-GTTCG TTGTTGGGAAACCTG SRU_1661 2064609 - 2063371 - | vitamin K epoxide reductase family protein TERM 1242 2064918 - 2064939 + G 100 -13.7 -5.45802 | CTGAATGGCTCTGGA CCCGCTGCC AATT GGTAGCGGG TTTTTGTTTTGCCCC trpE 2064907 - 2066478 + | anthranilate synthase component I SRU_1663 2066587 - 2067066 + | hypothetical protein TERM 1243 2068144 - 2068114 - g 85 -13.3 -4.07568 | gap 1, opp_overlap 2068120 GCCCCTCCTGGAAAA GGTGCGCGACCGGG TCGG CCTGGTC-CGCACC CACTAACGGACGGTG trpS 2067116 - 2068150 + | tryptophanyl-tRNA synthetase SRU_1665 2068274 - 2068876 + | para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II trpD 2068922 - 2069956 + | anthranilate phosphoribosyltransferase TERM 1244 2070094 - 2070081 - g 78 -5.9 -4.57581 | opp_overlap 2070090 AGCGGAAACAAGAAA CCCCG ACCT CGGAG CTCAAGGAGCGTCCG trpC 2070017 - 2070829 + | indole-3-glycerol phosphate synthase trpF 2070900 - 2071565 + | N-(5'phosphoribosyl)anthranilate isomerase TERM 1245 2072786 - 2072805 + G 70 -11.4 -3.42395 | overlap 2072785 CCTGGCCGAGGAGCG CGGGGACG ACGC CGTCCTCG TCTTTAACTGCTCCG trpB 2071644 - 2072864 + | tryptophan synthase subunit beta trpA 2072917 - 2073753 + | tryptophan synthase, alpha subunit SRU_1671 2073878 - 2075026 + | hypothetical protein SRU_1672 2075026 - 2075451 + | hypothetical protein SRU_1673 2077415 - 2075466 - | ATP-dependent DNA helicase RecQ TERM 1246 2078446 - 2078460 + Gr 73 -12.8 -3.11291 | opp_overlap 2078434, overlap 2078455 ACACGCGGCCCGCCC CCGCCG ACC CGGCGG TGTTGCCGTTCTACC SRU_1675 2077395 - 2078570 + | glycosyl transferase, group 2 family protein SRU_1674 2079482 - 2078538 - | hypothetical protein SRU_1676 2079932 - 2079507 - | hypothetical protein TERM 1247 2079810 - 2079764 - G 77 -2.8 -4.96848 | gap 1, overlap 2079765 GCTCGTAGAGAAAAA TGGCGCCGAGTGCGGTCGCGG CGGTCC CCACGACCAG-CCCAGCGACC GACGGGACGAACCAG SRU_1677 2080977 - 2079955 - | putative (NAD+) isocitrate dehydrogenase ^ TERM 1248 2081084 - 2081103 + r 83 -4.9 -5.00616 | opp_overlap 2081084 GGGCCAAACAAAAAA GCCCTGC CGGGAA GCAGAGC TTTTTTGGGGCGAGG TERM 1249 2081103 - 2081084 - R 100 -7.8 -5.63517 | opp_overlap 2081084 GGGCCAAACAAAAAA GCCCTGCC GGGA AGCAGAGC TTTTTTGGGGCGAGG SRU_1678 2081590 - 2081129 - | hypothetical protein SRU_1679 2082263 - 2081655 - | hypothetical protein SRU_1680 2082599 - 2082318 - | hypothetical protein TERM 1250 2082665 - 2082630 - R 91 -9.6 -4.57569 | gap 1, overlap 2082637 2082638 2082653 CTATCGTTGGAAAAA GAGAGAAGGGGACCCGG GAA CCAGG-CCCCTGCGCCC GCGGGGTCGGCGGCA TERM 1251 2082658 - 2082637 - R 76 -10.1 -3.89448 | gap 1, overlap 2082630 2082638 2082653 TGGAAAAAGAGAGAA GGGGACCCGG GAA CCAGG-CCCC TGCGCCCGCGGGGTC TERM 1252 2082658 - 2082638 - R 70 -12.5 -2.92584 | overlap 2082637 2082630 2082653 GGAAAAAGAGAGAAG GGGACCCGG GAA CCAGGCCCC TGCGCCCGCGGGGTC TERM 1253 2082690 - 2082653 - R 78 -15.5 -2.71731 | gap 1, opp_overlap 2082668, overlap 2082637 2082638 2082630 GGGACCCGGGAACCA GGCCCCTGCGC-CCGCGG GGT CGGCGGCACGCAGGGGGC CGTCCGCATCCCTAC SRU_1681 2083430 - 2082702 - | MotA/TolQ/ExbB proton channel family protein SRU_1682 2083984 - 2085714 + | phosphotransferase domain-containing protein TERM 1254 2087255 - 2087267 + G 73 -9.1 -3.90744 | overlap 2087253 CCGTCGCCCAACCCC GACCG ATT CGGTC TTCTTTGCGGGGCCG TERM 1255 2087351 - 2087384 + G 73 -9.5 -3.95378 | gap 1 CACCGACGTGCGACA GTGGCGGTGGGAGCGC GCT GC-CTCCGAGCGCCGC TTCTTTCCCGTATGG SRU_1683 2085753 - 2087720 + | penicillin amidase superfamily protein acs 2089736 - 2087745 - | acetyl-CoA synthase TERM 1256 2088333 - 2088363 + g 74 -10.2 -3.8512 | CACCAAGTTGCCGGC CTGCCCGCTCGCGG CCT CCACGGGCGTGCCG TTGTTGTCGTAGATG TERM 1257 2088404 - 2088420 + g 78 -15.1 -3.31269 | TGCCGGGGCACGGAC GCCCGGC CGA GCCGGGC TTCATGTCCTGTAGG SRU_1685 2091707 - 2089860 - | chorismate binding enzyme SRU_1686 2092868 - 2091846 - | oxidoreductase, zinc-binding dehydrogenase family protein SRU_1687 2093158 - 2094309 + | oxidoreductase, FMN-binding TERM 1258 2094723 - 2094707 - g 73 -12.3 -3.41051 | CCACTCCGAGGAGAA CCACCAC GAC GTGGTGG AGCAAAACTACCAGA SRU_1688 2094354 - 2095127 + | hypothetical protein SRU_1689 2098835 - 2095527 - | methylmalonyll-CoA mutase TERM 1259 2098371 - 2098402 + g 72 -11.8 -3.57971 | gap 1, overlap 2098372 2098374 CCCTGTGATCCCCAG CGTTGGAACGTTGGA ACG TTCAACGTTC-AACG TTTCAACGTCCATCT TERM 1260 2098372 - 2098416 + g 78 -10.2 -4.09685 | gap 1, overlap 2098371 2098374 CCTGTGATCCCCAGC GTTGGAACGTTGGAACGTTCA ACGT TCAACGTTTCAACG-TCCATC TTTTCAGGACTCCCG TERM 1261 2098374 - 2098414 + g 75 -11.4 -3.64716 | gap 1, overlap 2098371 2098372 TGTGATCCCCAGCGT TGGAACGTTGGAACGTTCA ACGT TCAACGTTTCAACG-TCCA TCTTTTCAGGACTCC TERM 1262 2099642 - 2099689 + G 81 -11.9 -3.93742 | overlap 2099661 GCGTGAACGCGGAGT CGGC-CCTCCGTGCGGCCGAGGC GGCG GTCGCGGCCG-ACGTCGGCGCCG TTGTCTTTCTGTCGG SRU_1690 2099074 - 2100138 + | 3-beta hydroxysteroid dehydrogenase/isomerase family protein SRU_1691 2100721 - 2100194 - | Na(+)/H(+) ion antiporter subunit family protein SRU_1692 2102216 - 2100648 - | NADH-ubiquinone/plastoquinone complex I protein SRU_1693 2102616 - 2102260 - | cation transport system protein, putative SRU_1694 2103096 - 2102662 - | putative monovalent cation/H+ antiporter subunit B SRU_1695 2105477 - 2103093 - | putative monovalent cation/H+ antiporter subunit A TERM 1263 2104338 - 2104326 - G 78 -6.2 -4.67904 | overlap 2104327 CACGAACCCGAAAAA CGGC GGAAT GCCG GCCATCGACAGGGCC TERM 1264 2105252 - 2105241 - G 70 -2.2 -4.60487 | gap 1 GAGGAGGGCGAAAAA GAGGC TCA GCC-C ATCGACGTAAAACGA SRU_1696 2105947 - 2105543 - | MnhG/PhaG subunit subfamily monovalent cation/proton antiporter SRU_1697 2106301 - 2105990 - | pH adaptation potassium efflux system phaF, putative SRU_1698 2106513 - 2106875 + | hypothetical protein SRU_1699 2106958 - 2107518 + | hypothetical protein SRU_1700 2107578 - 2107925 + | hypothetical protein SRU_1701 2110675 - 2108315 - | acyl-coenzyme A oxidase I, putative TERM 1265 2108987 - 2109040 + g 78 -15.7 -3.14931 | overlap 2109037 CGTGTCGGCCCGGAG GCGCCCGATTCGGGTGTCGGCCCGG TAGC CCTGGCCGCCGCACGCCTCGCGCGC TTCCTGGAGGGTGGC hemE 2111751 - 2110687 - | uroporphyrinogen decarboxylase SRU_1703 2112855 - 2111842 - | dienelactone hydrolase family protein TERM 1266 2112489 - 2112523 + g 73 -10.7 -3.66784 | gap 2 CCGAGTCCACATCGG CGGGCGCGGCCAGGTAC CCG GT-CCGGGCCGT-CCCG TTCTGTTGCCCGTAG TERM 1267 2113197 - 2113217 + GH 71 -12.5 -3.04144 | CGTGCGTGCTGGTGG GCGCCGCCG TGA TGGTGGCGC TGTTCCCCCTCCGGA TERM 1268 2113311 - 2113351 + GH 76 -14 -3.21099 | gap 2 GGTGGGGCCGCCACA CGTGG-GGGGCCCTCT-CGG CAA CCGTGGAGGGCACCACCGCG TTCATCGTCACGGGC cdsA 2112914 - 2113567 + | phosphatidate cytidylyltransferase SRU_1705 2113509 - 2114519 + | putative secreted lipase SRU_1706 2114594 - 2115907 + | HD domain-containing protein TERM 1269 2116694 - 2116673 - g 74 -2.1 -4.82901 | gap 1 CCGGGGCCACAAAAA GCTG-CGTGC TGA GCTCGACCGC GCCCTCGATCCGGTG SRU_1707 2116164 - 2116718 + | ECF-subfamily sigma factor tnaA 2116819 - 2118234 + | tryptophanase ansA 2119330 - 2118242 - | L-asparaginase TERM 1270 2118707 - 2118671 - G 70 -9.9 -3.695 | opp_overlap 2118673, overlap 2118664 2118662 CGGAAAGAGCCGAAA CGCCGAGACGGTCGCCG CCC CGAGTTCCGTCACGGCG GGGGGACGGGGCGGC hpt 2120074 - 2119475 - | hypoxanthine phosphoribosyltransferase TERM 1271 2119911 - 2119952 + g 77 -3.7 -4.7373 | gap 2 ATGGGGGTGGTGGTG GCGTAGTCGCGGGCGATGG TTTTTC CCATC-TCCGCAACC-CGC TTTTTAATCCGCTCG tilS 2121543 - 2120137 - | tRNA(Ile)-lysidine synthetase mutL 2123518 - 2121575 - | DNA mismatch repair protein MutL TERM 1272 2123417 - 2123435 + g 91 -11.6 -4.1899 | CACCTCGATCGACGA CGCCCCCG CGT CGAGGGCG TTTTCGATCAGCTCC SRU_1713 2123783 - 2123583 - | hypothetical protein cdsA 2124757 - 2123939 - | phosphatidate cytidylyltransferase TERM 1273 2124218 - 2124231 + g 73 -3.8 -4.63218 | CCCCAGGCCCCCAAG CGTG CCCTCC CACG TTTTGTTCGGGGAAA SRU_1715 2125200 - 2124805 - | hypothetical protein SRU_1716 2126124 - 2125216 - | hypothetical protein TERM 1274 2126455 - 2126484 + H 100 -12.2 -4.74285 | AGACAGCTCCCCTCG CCGATTTTGGGC CCTGGC GCCCGAGATCGG TTTTCTGTTGTAGAT SRU_1718 2126682 - 2127203 + | hypothetical protein SRU_1719 2127203 - 2128915 + | HEAT repeat-containing protein SRU_1720 2129720 - 2128956 - | SPFH domain-containing protein SRU_1721 2129911 - 2131467 + | DNA damage-inducible protein SRU_1722 2131508 - 2131783 + | hypothetical protein SRU_1723 2131879 - 2132403 + | protease I TERM 1275 2132487 - 2132462 - T 100 -20.5 -4.3534 | opp_overlap 2132454 2132453 2132451 CCCCAACGACGAAAA GGGATGGCCGG GCAG CCGGCCATCCC TTCAGGGCATCTTTC SRU_1724 2133163 - 2132546 - | Mn-superoxide dismutase TERM 1276 2133393 - 2133374 - R 80 -5.7 -4.8048 | gap 1, overlap 2133376 2133388 GGCCCACAGGAAAAA GACGGCGT AGAGG ACGCCG-C TGGCCCGGTTCCACC TERM 1277 2133392 - 2133376 - R 76 -9.4 -4.02302 | overlap 2133374 2133388 CCCACAGGAAAAAGA CGGCGT AGAGG ACGCCG CTGGCCCGGTTCCAC lys1 2134868 - 2133675 - | saccharopine dehydrogenase SRU_1726 2135829 - 2134771 - | zinc carboxypeptidase superfamily protein TERM 1278 2135607 - 2135587 - GH 74 -9 -3.96148 | CCCGTTGATGAGAAA GGACCGAA GGGTT TCCGGTCC CACGGGCTCGTCCGC SRU_1727 2136067 - 2136282 + | hypothetical protein TERM 1279 2136313 - 2136345 + T 70 -12 -3.25192 | gap 1, overlap 2136309 2136315 2136316 GTCCCATCCCGGAAC GTG-CGCCCCATTCC ATGC GGGATGGGGCGTCTC TCTTGTGGGGTTAGG TERM 1280 2136315 - 2136343 + T 73 -13.2 -3.18832 | gap 1, overlap 2136313 2136309 2136316 CCCATCCCGGAACGT G-CGCCCCATTCC ATGC GGGATGGGGCGTC TCTCTTGTGGGGTTA TERM 1281 2136316 - 2136341 + T 89 -16.9 -3.15013 | overlap 2136315 2136313 2136309 CCATCCCGGAACGTG CGCCCCATTCC ATGC GGGATGGGGCG TCTCTCTTGTGGGGT SRU_1728 2137681 - 2136356 - | hypothetical protein SRU_1729 2139842 - 2137662 - | hypothetical protein TERM 1282 2138637 - 2138602 - G 77 -16.1 -2.78384 | opp_overlap 2138623 TGCCGGGTGACCACA TCGTGGGCCGCCCGC GACACG GCGGGCGCCCGACGA AGATGGGCCGCCCAC SRU_1730 2140997 - 2140038 - | hypothetical protein TERM 1283 2141114 - 2141090 - R 93 -9.3 -4.74103 | opp_overlap 2141090 TCCTCAACGCAAAAA GCCCTTGCC GACAAAA AGCAAGGGC TTCTTCCGCGACGTG SRU_1731 2141404 - 2141213 - | histone H1-like protein argB 2142297 - 2141554 - | acetylglutamate kinase TERM 1284 2142475 - 2142509 + r 74 -5.5 -4.45945 | opp_overlap 2142477, overlap 2142476 2142477 ACGCCCAAAACAAAA AAGCACAGTGCCGGG CCGTC CCCGACACTGCGCAG TTTTGCTTCGTCCGT TERM 1285 2142507 - 2142477 - R 100 -16.9 -5.79595 | opp_overlap 2142477 2142476 2142475 GCCCAAAACAAAAAA GCACAGTGCCGGG CCGTC CCCGACACTGCGC AGTTTTGCTTCGTCC SRU_1733 2144757 - 2142550 - | acyl-CoA dehydrogenase pyrF 2144833 - 2145828 + | orotidine 5'-phosphate decarboxylase SRU_1734 2146183 - 2145797 - | hypothetical protein SRU_1736 2147141 - 2146212 - | universal stress protein SRU_1737 2148068 - 2147157 - | universal stress protein TERM 1286 2147244 - 2147215 - G 71 -12.1 -3.26031 | gap 1, overlap 2147213 2147211 2147219 2147220 GGGACGGTAAACACA GGAACGGGGGC-GC GGC GCAGCACCCGCTCC GCCACACTTCCCAAT SRU_1738 2148281 - 2148553 + | hypothetical protein TERM 1287 2148577 - 2148617 + T 79 -8.8 -4.26003 | overlap 2148580 2148581 CGCTTGCGCCTGAAT GGCCCCCGCTCGGAGCCG TCCCC TGGCTCGGGGCGGGCTTC TTTATTGGGTCTTAT TERM 1288 2148580 - 2148614 + T 84 -11.3 -4.23156 | overlap 2148577 2148581 TTGCGCCTGAATGGC CCCCGCTCGGAGCCG TCCCC TGGCTCGGGGCGGGC TTCTTTATTGGGTCT TERM 1289 2148581 - 2148613 + T 80 -14.8 -3.12809 | overlap 2148580 2148577 TGCGCCTGAATGGCC CCCGCTCGGAGCCG TCCCC TGGCTCGGGGCGGG CTTCTTTATTGGGTC SRU_1739 2149768 - 2148671 - | major facilitator transporter TERM 1290 2149364 - 2149343 - G 79 -11.5 -3.85698 | overlap 2149327 2149344 GCCGGTTCCCAGAAA GGCCGTGGC CGCG GCCACGGCG AACGTCGCCTCGAAC TERM 1291 2149363 - 2149344 - G 73 -15 -2.91276 | overlap 2149327 2149343 CCGGTTCCCAGAAAG GCCGTGGC CGCG GCCACGGC GAACGTCGCCTCGAA hemL 2151324 - 2149984 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 1292 2151189 - 2151174 - G 76 -8.2 -4.25104 | CGCGTTCGATGAAAA GCGGGG TCCC CCCCAC GCTGTCGAAGGCACG hemH 2153353 - 2152010 - | ferrochelatase hemF 2154406 - 2153483 - | coproporphyrinogen III oxidase rluA 2155262 - 2154564 - | ribosomal large subunit pseudouridine synthase A SRU_1744 2156343 - 2155315 - | oxidoreductase TERM 1293 2156118 - 2156093 - G 73 -6.1 -4.37092 | overlap 2156096 ACGCCCTCCAGAAAA GAGGTGGTGGT GTGG AGCACCACGTC GGGCGCAGTGTCGGC lysC 2157351 - 2156419 - | aspartate kinase TERM 1294 2157982 - 2157924 - g 100 -20.8 -3.4252 | opp_overlap 2157975, overlap 2157953 CGCGACGGACGACAA TCCAGCCCTCCGCGGCGCCCTCCAGGGA ACG TCCCGGACGACCGCCGGGGTGGGCCGGA CCGAGACGGCCCTTC SRU_1746 2157409 - 2158578 + | spore maturation protein A SRU_1747 2158628 - 2159173 + | hypothetical protein dacB 2160716 - 2159220 - | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase SRU_1749 2162334 - 2160817 - | hypothetical protein SRU_1750 2163271 - 2162543 - | hypothetical protein SRU_1751 2163291 - 2163524 + | hypothetical protein SRU_1752 2163608 - 2164120 + | hypothetical protein SRU_1753 2164364 - 2164143 - | hypothetical protein phrB 2165770 - 2164382 - | deoxyribodipyrimidine photolyase TERM 1295 2164462 - 2164430 - G 77 -15.6 -3.07013 | gap 1, opp_overlap 2164452 TACCTTCTCAACATA GGCGTCC-GGATCGG CCTT CCGATCCAGGCCGCC CTGGCTCATGTACCG TERM 1296 2165512 - 2165524 + g 79 -3.3 -5.09762 | overlap 2165503 GTTTGAGCCCGCGGT CGGCG AGG CGTTG TTTTGTTTCTTGGAG gltP 2167232 - 2165880 - | proton/glutamate symporter SRU_1756 2168879 - 2167392 - | hypothetical protein TERM 1297 2168962 - 2168928 - R 100 -18.6 -5.07652 | gap 1 CGCCCCAAAACAAAA CCGCCCCGG-CACGC TTGGCG GCGCGACCGGGGCGG AAAGACGCTATACAA rpoC 2173335 - 2168989 - | DNA-directed RNA polymerase subunit beta' TERM 1298 2171778 - 2171827 + g 73 -12.2 -3.35679 | gap 3, overlap 2171779 AGAGGCCCAGAATCA TGTCC-TGGCTCGGCACGGCGAGCG GGC CGC-CGTCG-GCCGGGCTGCGGACG TTGTGGCTCGACAGC rpoB 2177454 - 2173447 - | DNA-directed RNA polymerase subunit beta TERM 1299 2177805 - 2177755 - R 81 -12.1 -3.89435 | gap 3 CCCAAAGAAGCCAAA GGCCAATCCCGAGCACG-TTCGGG ACGGAA CCCGAATCGT-C-CAGGATCGGCC TTCGCGGGCAAGAAG rplL 2178273 - 2177890 - | ribosomal protein L7/L12 rplJ 2178948 - 2178412 - | ribosomal protein L10 rplA 2179713 - 2179000 - | ribosomal protein L1 SRU_1762 2180430 - 2179834 - | ribosomal protein L11, putative TERM 1300 2179981 - 2180028 + gr 72 -14 -2.70298 | gap 1, overlap 2179980 2179993 GTCCCAAGTGACCGT GCCGGCATCG-TCCCGAAGCGGG TCG CCCGCGGCGGTTTCGATGTCGGC CTTCTGCTTCAGAAG TERM 1301 2179993 - 2180015 + gr 74 -10.4 -3.7108 | overlap 2179981 2179980 CGTGCCGGCATCGTC CCGAAGCGGG TCG CCCGCGGCGG TTTCGATGTCGGCCT TERM 1302 2180301 - 2180329 + gr 72 -7.3 -4.15044 | opp_overlap 2180296 CGGTACAAACGTTGC CCGATGGGAGTCG GGC CCACTTCCGCCGG TTTGTTCGAGAAACA TERM 1303 2180363 - 2180352 - GR 72 -7.2 -4.12037 | opp_overlap 2180358, overlap 2180353 GAGAAACACGAGAAA GGGC GACG GCCC CAGTGGCGCCGTCAT nusG 2180950 - 2180393 - | transcription termination/antitermination factor NusG TERM 1304 2180872 - 2180885 + gr 76 -2.3 -4.94902 | CGATCTCACTTTCCA GGTAC CGAC GCACC TTTTTCTCATGGTTC SRU_1764 2181302 - 2181000 - | preprotein translocase, SecE subunit, putative tuf 2182653 - 2181463 - | elongation factor Tu TERM 1305 2182282 - 2182254 - G 78 -15.3 -3.13403 | overlap 2182252 TCTTGTTCATGAACA CCACCAGGTAGGG CAC CCCCACCTGACGG GCCAAAAGAATGTGC SRU_1767 2182969 - 2184885 + | putative sodium-dependent transporter SRU_1768 2185057 - 2185368 + | hypothetical protein TERM 1306 2185459 - 2185505 + T 73 -8.7 -4.07568 | overlap 2185460 2185504 CTACGAGCCCACACG CGTCCCCGGAATGGGGAG-GCGG GGC CCGGGCTGCCTA-TCCGGGGACC TTTTGCCCCACGAGG SRU_1769 2185735 - 2185493 - | hypothetical protein TERM 1307 2187028 - 2187039 + G 73 -3.6 -4.63218 | ATGTCGGTGGGACGT CCGG GCTC TCGG TTTTCTTCCCCCCCA TERM 1308 2187636 - 2187652 + G 85 -5.7 -5.07941 | opp_overlap 2187637, overlap 2187637 CGTGTCGCCGTAGAG ACGGGTC CCC GGCCCGA TTTTTGTGTACTTTT SRU_1771 2185767 - 2187983 + | hypothetical protein scpA 2188781 - 2187960 - | segregation and condensation protein A TERM 1309 2187988 - 2188023 + g 70 -5.9 -4.25104 | GAGTCCCCTGAGCCT CCCCCGACGGCCCCA TCTCCT TGGGGCCGAGAGAGG TTTTGCTGGGCCGGA galE 2190028 - 2189042 - | UDP-glucose 4-epimerase TERM 1310 2190122 - 2190099 - R 100 -16 -4.52589 | opp_overlap 2190099 CGGGCCTATACAAAA GGCGAGAGCC CAGG GGCCCTCGCC TTTTGTGCAATCGCA TERM 1311 2190099 - 2190122 + r 100 -13.8 -4.4009 | opp_overlap 2190099 CGGGCCTATACAAAA GGCGAGAGCC CAGG GGCCCTCGCC TTTTGTGCAATCGCA pnp 2192346 - 2190178 - | polynucleotide phosphorylase/polyadenylase TERM 1312 2192443 - 2192417 - R 100 -19.4 -3.83026 | opp_overlap 2192403 CCCCCGTACAGCAAA CGGCCTCCCGGC GAG GCCGGGACGCCG CATTGCGGAACAGAC rpsO 2192724 - 2192458 - | ribosomal protein S15 TERM 1313 2192795 - 2192771 - R 95 -9.9 -4.57581 | ATGCTAAAGAAGAAA CCGCGACTCCA GCG TGGGTTCGCGG GCGAACGTGCCGAAC ribF 2193785 - 2192850 - | riboflavin biosynthesis protein RibF rbfA 2194450 - 2194052 - | ribosome-binding factor A infB 2197616 - 2194527 - | translation initiation factor IF-2 TERM 1314 2197048 - 2197091 + g 78 -16 -3.18264 | gap 1, overlap 2197037 TGCTCGTCCGCAATC GCCGCGGC-GTCCTTGTCGGC CGC GTCGACAGGGGCCGTCTCGGC TTCGTCCGTGGGCGC TERM 1315 2197682 - 2197652 - R 71 -5.4 -4.48072 | gap 1, opp_overlap 2197653, overlap 2197653 2197656 AGACTCACTACAAAA GC-GACCGCCGAA GTCGTT TTCGGCGGCATGC GCAGCTAAGATCGAA nusA 2199327 - 2197687 - | transcription elongation factor NusA TERM 1316 2198622 - 2198644 + g 71 -9 -3.7732 | CCGCCACCTTGGCGC GGTCGCCAGG AAT CCGGGCCACC TTCTTGATCTCGACG SRU_1779 2200044 - 2199391 - | hypothetical protein TERM 1317 2199929 - 2199901 - G 100 -11.6 -5.05782 | overlap 2199903 ACCTAGTGCAAAAAA GCGCCCGGCCCG ACAGG CGGGACGAACGC CATGTGCGGCCCGGG TERM 1318 2200016 - 2199998 - G 88 -8.8 -4.93296 | opp_overlap 2199987 2199998 GCATCAGTACAAAAA GGTGGCGT CGG AGGCCACC TTCTCGCGCTGTTTT TERM 1319 2200071 - 2200089 + r 71 -8.8 -3.87815 | opp_overlap 2200063 GTCAAAACGGTGTAA CGTTGGGC CCC GCCCGATG TTTCTACGCGTCCGC prfB 2201268 - 2200131 - | peptide chain release factor 2 aspB 2202608 - 2201376 - | aspartate aminotransferase TERM 1320 2201643 - 2201676 + g 71 -12.4 -3.31144 | opp_overlap 2201642 CAGCCCCGACACGAT GGTGCGGCGGCGCT CGTCGT AGCTCTGCCGCATC TTCTCCACGTCGCCC TERM 1321 2204240 - 2204229 - g 79 -3.6 -4.87665 | GGCCAGCTACAAAAA GCCC AGAT GGAC TCGGTGGAAGACTAA SRU_1782 2202666 - 2204255 + | aldehyde dehydrogenase (NAD) family protein TERM 1322 2204298 - 2204326 + T 100 -19 -4.66537 | TCTCGCTCTGCAATG CGGGTGGTGATG GAGCG CATCACCACCCG TTTTGTATTGCAGAA SRU_1783 2204702 - 2204394 - | hypothetical protein SRU_1784 2205231 - 2204881 - | hypothetical protein SRU_1785 2206042 - 2205311 - | hypothetical protein TERM 1323 2205489 - 2205451 - G 82 -16.6 -3.28712 | opp_overlap 2205452 TGTCGCTGTTCACAA CGGGGGCGGATGCCTCCT TCA ATGTGGCGTCCACCCCCG CGTGCGCGTTAAGGG SRU_1786 2207587 - 2206106 - | NAD-dependent malic enzyme TERM 1324 2207649 - 2207623 - R 100 -15.9 -5.29846 | opp_overlap 2207623, overlap 2207643 AACCCCAAAGAAAAA GGACGGCTTCC GACAG GGAAGCCGCCC TTTGTGCGTCAGGAA TERM 1325 2207623 - 2207649 + r 86 -13.7 -3.91897 | opp_overlap 2207623 2207643 AACCCCAAAGAAAAA GGACGGCTTCC GACAG GGAAGCCGCCC TTTGTGCGTCAGGAA SRU_1787 2210303 - 2207688 - | ribosomal protein S1, putative TERM 1326 2208360 - 2208395 + g 71 -14.7 -2.64099 | opp_overlap 2208360, overlap 2208359 ACTGCCCGGGACAAA GGCCTCCACGTCCAG CGGCAA CTGGACGACGAGGCC CTTGTCCTCCACGCG TERM 1327 2208395 - 2208360 - G 90 -15.4 -3.85817 | opp_overlap 2208360 2208359 ACTGCCCGGGACAAA GGCCTCCACGTCCAGC GGCA ACTGGACGACGAGGCC CTTGTCCTCCACGCG cmk 2211209 - 2210526 - | cytidylate kinase SRU_1789 2211985 - 2211257 - | hypothetical protein TERM 1328 2211469 - 2211440 - GH 93 -7.7 -5.00616 | GTTGTCGTCAAAAAA CCGGACGAGGTCG ACCT CCACGTCGACCGG CACGTCCGTGGGCTC TERM 1329 2212223 - 2212192 - gH 74 -5.7 -4.39828 | gap 1, overlap 2212193 2212211 AAGACCTTCACAAAA CCGC-CCTCGGCGC ACAGG ACGCCGTGGAGTGG AGCCAGCACGACGAG SRU_1790 2211984 - 2212547 + | SpoU rRNA methylase family protein TERM 1330 2212842 - 2212797 - g 79 -16.7 -2.87931 | GGGAGGCCCTACACA CCGACCCGGAAGGGGGCCATC CGCC GCTGGCCCACTCCGGGGACGG GCCGGCCAACACGTG TERM 1331 2213521 - 2213537 + G 79 -4.4 -4.82901 | gap 1, overlap 2213517 TGGGGCGTCCCTCAG CGT-GGC CCCC GCCGACG TTTTTGTCCACGCCA SRU_1791 2212682 - 2214628 + | methylmalonyl-CoA mutase superfamily protein mutA 2214693 - 2216846 + | methylmalonyl-CoA mutase TERM 1332 2217404 - 2217442 + G 77 -3.9 -4.78107 | gap 2, overlap 2217431 GTCGAAACAGTGGGG GTCGGCCAGTCGGAGATCA GCG TGCGCTC-GA-TGGTCGAC TTTTTCCTGCTCCTC SRU_1793 2216891 - 2217928 + | arginine/ornithine transport system ATPase SRU_1794 2217973 - 2218518 + | hypothetical protein TERM 1333 2220303 - 2220283 - g 70 -8.9 -3.9941 | overlap 2220284 TCGTGTACAACCAAA TCGTGCCGC TCC GCGACACGT GGGGCGAGGACGAAG TERM 1334 2220449 - 2220409 - g 77 -15.4 -3.05844 | overlap 2220387 2220380 CGCTCGACGGCAAGA CCGACCCCGCCGAGCATC TGGAC GACGCCCAACGGGACCGG TTCGACCGATTCCAC SRU_1795 2218611 - 2220977 + | glutaminyl-tRNA synthetase gltX 2222531 - 2221011 - | glutamyl-tRNA synthetase TERM 1335 2221839 - 2221790 - G 100 -21.6 -2.63913 | gap 1, opp_overlap 2221781 2221786 GAGCATCGTACATGA GCACGTGCTTCGGGGTCGACGAG AGCCA CTCCTCG-CCCCGAATCACGTGC GAGATGTTCATGAGG SRU_1797 2222779 - 2224836 + | peptidyl-prolyl cis-trans isomerase domain-containing protein SRU_1798 2224814 - 2225728 + | hypothetical protein TERM 1336 2225791 - 2225801 + G 75 -4.6 -4.57533 | overlap 2225785 TACTTGCATGCGTCA CGTG TGC CGCG TTTTCTCATCTTCTT SRU_1799 2225783 - 2227177 + | peptidylprolyl cis-trans isomerase moxR 2227252 - 2228247 + | methanol dehydrogenase regulator SRU_1801 2228339 - 2229175 + | ferredoxin NADP+ reductase SRU_1802 2229305 - 2229871 + | FxsA cytoplasmic membrane protein SRU_1803 2230724 - 2229900 - | hypothetical protein TERM 1337 2230578 - 2230590 + g 77 -6.9 -4.56597 | GTCCATCGACTCCCA CGCCT GAA GGGCG TTTTTGAGGACCCGG SRU_1804 2230909 - 2231364 + | hypothetical protein pepP 2231430 - 2232878 + | Xaa-Pro dipeptidase SRU_1806 2236258 - 2232914 - | ATP-dependent DNA helicase TERM 1338 2234747 - 2234733 - G 73 -9.2 -3.90112 | opp_overlap 2234713 GCGCCTTGAATGAAA CGGGCA ATG CGCCCG GCGTCCTGTGCGGCG TERM 1339 2235096 - 2235077 - G 73 -10.6 -3.75024 | CCCGACGATGAACAA GCTGCCCG GAAG CGGGCGGC AGTCGGTCCAGGTCG SRU_1807 2239609 - 2236388 - | hypothetical protein TERM 1340 2237033 - 2236976 - G 77 -6.7 -4.56597 | gap 1, opp_overlap 2236996 2237023 2237024, overlap 2236978 CTCGGCCCGCAAAAA CACGAGCG-CATCCGCCCGGAGCCGGCG AAA CGCCGCCTCTTCGACGACGTCGCTCGGG GGCGCGACCTGTTCG TERM 1341 2236993 - 2236978 - G 70 -8.2 -3.90048 | overlap 2236976 CGGCCCGCAAAAACA CGAGCG CATC CGCCCG GAGCCGGCGAAACGC SRU_1808 2240161 - 2239616 - | protein parB TERM 1342 2239867 - 2239816 - G 75 -7.1 -4.30576 | overlap 2239817 TGCGCACCACGAAAA GGGAGCGGCCGT-CGGGGCCGTCCG TCTC CGCTCGGGCCCGCACGTCCG-TCCG GAAGACGACCCGTCG TERM 1343 2240554 - 2240501 - H 79 -8.2 -4.25104 | gap 3, opp_overlap 2240500 GGGTTGTCAGGAAAA TCGTCGGGACCGGAGGAGCACGGGAGG GGC CCTCTCGC-CTCC-CC-ATCCCAGCGA CGTTATGATCGCATC SRU_1809 2240698 - 2242020 + | hypothetical protein SRU_1810 2242093 - 2242434 + | antibiotic biosynthesis monooxygenase domain-containing protein SRU_1811 2243135 - 2242509 - | hypothetical protein TERM 1344 2243877 - 2243889 + G 77 -10.5 -3.9122 | overlap 2243869 GCCAGCACGGCGGGC CGCCC GGT GGGCG TTGTTTCCGGCCCTG TERM 1345 2245980 - 2245923 - g 81 -7.5 -4.57837 | gap 1, overlap 2245924 2245926 ACAGCTCCGGAAAAA CCAGCTCCGGAAGGCCCGTCAGCAGCAG CGA CGGCTGCAGAAACGCCT-CCAGAGCATG CAGTCGCGGATGTCT TERM 1346 2245977 - 2245926 - g 71 -12.2 -3.23708 | gap 1, overlap 2245923 2245924 GCTCCGGAAAAACCA GCTCCGGAAGGCCCGTCAGCAGCAG CGA CGGCTGCAGAAACGCCT-CCAGAGC ATGCAGTCGCGGATG SRU_1812 2243266 - 2246994 + | hypothetical protein TERM 1347 2247281 - 2247258 - f 100 -18.2 -4.98255 | GTCCAACTACAAAAA CGGCTCCGTC GACT GACGGAGCCG TTCAGGACAGGTGCT nce 2248053 - 2249105 + | Na+/Ca2+-exchanging protein msrB 2249551 - 2249147 - | methionine-R-sulfoxide reductase ftsH 2251651 - 2249600 - | cell division protein FtsH acs 2252046 - 2253920 + | acetyl-CoA synthetase SRU_1821 2254028 - 2255128 + | hypothetical protein SRU_1822 2255510 - 2255142 - | hypothetical protein SRU_1823 2256128 - 2255532 - | hypothetical protein TERM 1348 2256123 - 2256084 - G 81 -10.8 -4.07868 | gap 2, overlap 2256085 CCACAGGGAGACAAA CCGGTCGACCGCGACCCG GGCCTG CGAGCCGCGGTCGA--GG TTCAAGAGATCCAGT SRU_1824 2256155 - 2257225 + | hypothetical protein TERM 1349 2257479 - 2257424 - g 80 -15.5 -3.33696 | gap 3, overlap 2257425 GCCCCCCCGAACGAA CGCCCCGAGG-C-CCCGGAGGA-CTGGC TCG ACCTGCTCCTCCGGGAGGCCCCGGAGCA GGGACAAGCGCCAAG TERM 1350 2257478 - 2257425 - g 80 -16.8 -2.60075 | gap 3, overlap 2257424 CCCCCCCGAACGAAC GCCCCGAGG-C-CCCGGAGGA-CTGGC TCG ACCTGCTCCTCCGGGAGGCCCCGGAGC AGGGACAAGCGCCAA SRU_1825 2257271 - 2258542 + | hypothetical protein vicK 2259784 - 2258546 - | sensor histidine kinase TERM 1351 2258815 - 2258837 + g 100 -12 -4.58283 | TGATGCGGCCCTCCT CGTCCTCGAT CGC GTCGAGGGCG TTTTTGAGAAGGTTC purA 2261356 - 2260037 - | adenylosuccinate synthetase secF 2262321 - 2261410 - | preprotein translocase subunit SecF TERM 1352 2261591 - 2261556 - G 81 -11.9 -3.97022 | CGAAGACAAACAGAA TCGTGACCACGATGA GGGTCG TCAGCGAGGTCACGA CGGTTCGGCTCAGCG TERM 1353 2261779 - 2261767 - G 70 -6.2 -4.18494 | GATCTGGACGGAAAA CGGC GCGAT GCCG GCCAGGACCGAGAAG secD 2264346 - 2262382 - | preprotein translocase subunit SecD TERM 1354 2264884 - 2264896 + H 100 -4.7 -5.57396 | TTGGGGGTTTCACCC GCCGG AGT CCCGC TTTTTTGTTGCTTCT SRU_1831 2264931 - 2265830 + | lysophospholipase SRU_1830 2266554 - 2265811 - | hypothetical protein TERM 1355 2266258 - 2266290 + g 100 -10.6 -4.72272 | gap 1 GTCGTTGTACTCGTA CTGCGGCTGGAG-GC GGAG GCTCTCCATCTGCAG TTTTTCCTCGGGGAC asnS 2268335 - 2266701 - | asparaginyl-tRNA synthetase SRU_1833 2269245 - 2268382 - | hypothetical protein SRU_1834 2269233 - 2269394 + | hypothetical protein TERM 1356 2270340 - 2270329 - g 71 -3 -4.65895 | overlap 2270332 GCTGCTACGCAAAAA TGAT CGAC ATCA CCCCCGAGAGTGAGC pckA 2269506 - 2271113 + | phosphoenolpyruvate carboxykinase TERM 1357 2271443 - 2271484 + T 79 -9.4 -4.17296 | gap 1, opp_overlap 2271450, overlap 2271445 ATGCCGCGATAAAAA TAGAAAACGCCCCGCTCTC GGTGA GAGGGCGGGGCGTTG-CGG TTTGTCTGTATGCGG TERM 1358 2271478 - 2271450 - T 100 -17.4 -5.02287 | opp_overlap 2271445 2271443 GATAAAAATAGAAAA CGCCCCGCTCTC GGTGA GAGGGCGGGGCG TTGCGGTTTGTCTGT SRU_1837 2272052 - 2271618 - | acetyltransferase, putative asd 2273311 - 2272220 - | aspartate-semialdehyde dehydrogenase TERM 1359 2273765 - 2273718 - g 100 -11.8 -4.8622 | overlap 2273753 CGCGGCAAGGAAAAA GACGCCGCGGAGGTGGGCATCG AGAC CGAAACGCACCACCTCGACGCC GACACGTCGCAGAGT SRU_1839 2273541 - 2274434 + | FolD bifunctional protein SRU_1840 2274471 - 2275505 + | small conductance mechanosensitive ion channel (MscS) family protein SRU_1841 2275933 - 2275514 - | hypothetical protein surE 2276785 - 2275967 - | acid phosphatase SurE TERM 1360 2276706 - 2276672 - G 70 -8.6 -3.96148 | overlap 2276674 GGGGGCCACGACAAA CAGCTCGC-CCAGCCC GTCGA GGGCCGACGCGAGC-G ACTGGATGCCGGGGG TERM 1361 2276705 - 2276674 - G 74 -12.3 -3.57406 | gap 1, overlap 2276672 GGGCCACGACAAACA GCTCGC-CCAGCCC GTCGA GGGCCGACGCGAGC GACTGGATGCCGGGG panB 2277656 - 2276859 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase SRU_1844 2278443 - 2277838 - | Outer membrane protein (OmpH-like) SRU_1845 2279115 - 2278507 - | outer membrane protein OmpH, putative SRU_1846 2281707 - 2279173 - | outer membrane protein, putative TERM 1362 2281709 - 2281688 - G 74 -2.1 -4.79955 | gap 1, opp_overlap 2281688 ACAGCGAGAACAAAA GCGGGCAGCC GTA GGC-GCATGC TGATTGGGTGCTCGT uppS 2282803 - 2281877 - | undecaprenyl diphosphate synthase SRU_1848 2284316 - 2282874 - | membrane-associated zinc metalloprotease, putative dxr 2285591 - 2284386 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1363 2285325 - 2285350 + g 78 -5.9 -4.63486 | overlap 2285327 CCCCACGAGGACCCG CACGTCCGGCG CGTC CGCCGGCAGCG TTTTCTTGAACGCCT TERM 1364 2286198 - 2286146 - g 73 -12.6 -3.44051 | gap 1, overlap 2286126 TCTTCAGTACCAGAA GGGCGAGGGGGAGGCCGCCGATGCC ACGT GGGATCGG-GCGCTCGCACTCGCCC CCAACGAGCCCCAGA TERM 1365 2287560 - 2287541 - g 73 -10.6 -3.64703 | opp_overlap 2287551 2287553, overlap 2287542 GCTCCTCGAGGCAAA TGGCCGCC CCGC GGCGGCCG TCGAGACCTACGACC SRU_1850 2285775 - 2287658 + | TPR repeat-containing protein SRU_1851 2287710 - 2288987 + | hypothetical protein TERM 1366 2288986 - 2288976 - f 78 -3.2 -5.05606 | GCCAAGAAAAAGAAA CAGA AGA CCTG ACGTCCGCGGCGCGT SRU_1852 2289039 - 2289593 + | thioesterase domain-containing protein SRU_1853 2289643 - 2290086 + | sigma-54 interacting transcription regulator protein TERM 1367 2290213 - 2290191 - g 85 -9.8 -4.18018 | overlap 2290192 TCGCCTCAGCCAAAA CCGCGAGTAC GAC GTGCTCGCGA CCGCTCGGGACGACG TERM 1368 2290441 - 2290415 - g 72 -8.6 -4.07568 | opp_overlap 2290431, overlap 2290428 CGCGTGCCGTCAAAA CACTGGCGAAGC ACT GCCGCACCAGCG GAGCCCGCCTCGTGC SRU_1854 2290114 - 2291037 + | dTDP-4-dehydrorhamnose reductase TERM 1369 2291568 - 2291584 + G 74 -8 -4.18018 | GGGGCGCCAAGGTGG CGGGAA GCGGG TTCCCG TTTTACCTCGGCAAG TERM 1370 2292320 - 2292289 - g 91 -13 -4.17048 | overlap 2292314 CCTCCTCGAAAACAA CCAGCAGCCCGACG GCTC CATCGAACTGCCGG AGGCGCTCCACCCCT serS 2291084 - 2292370 + | seryl-tRNA synthetase fbp 2293660 - 2292470 - | fructose-1,6-bisphosphatase TERM 1371 2292950 - 2292923 - G 82 -6.2 -4.8048 | opp_overlap 2292941 2292942 GTGCGACAGCAAAAA CTCCCCGATCGA CGGA TCGAGCGTGAAG CCGTTCACGCCATTT SRU_1857 2294381 - 2293671 - | hypothetical protein SRU_1858 2295677 - 2294391 - | cysteine desulfurase murA 2295679 - 2297106 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase SRU_1860 2300652 - 2297164 - | hypothetical protein SRU_1861 2301754 - 2300831 - | hypothetical protein purD 2303061 - 2301769 - | phosphoribosylamine--glycine ligase SRU_1863 2303166 - 2304461 + | hypothetical protein SRU_1864 2304400 - 2305497 + | hypothetical protein SRU_1865 2305545 - 2306192 + | polysaccharide deacetylase acnA 2306332 - 2309064 + | aconitate hydratase 1 SRU_1867 2309511 - 2309107 - | putative transcription regulator protein SRU_1868 2312612 - 2309553 - | exonuclease SbcC, putative TERM 1372 2311167 - 2311194 + g 72 -14.8 -2.76964 | overlap 2311164 2311163 CTGCCCCGCCTGCTC CTGGACGGCCTG GGAC CGGGCCGTCCCG TCGTCTTCGATCTCG SRU_1869 2313227 - 2312703 - | hypothetical protein cvpA 2313803 - 2313243 - | CvpA family protein TERM 1373 2313759 - 2313722 - G 70 -8.4 -3.97622 | gap 2 CCACGGAAAAGAGAA GCG-C-GGCCACGAGCCC AAGG AGGCTCGCCGCCTGACGC ACGGCCCCCACCAAG SRU_1871 2314523 - 2313993 - | GatB/YqeY domain-containing protein ptsI 2316389 - 2314542 - | phosphoenolpyruvate-protein phosphotransferase TERM 1374 2315569 - 2315613 + g 83 -13.3 -3.77831 | AGGGGGCCCTCGGGC GCGCGCTCCCGTTCCGCCGTC GGG GACGGCGCGTCGGCCGCTCGC TTTCGATATTCCTCC TERM 1375 2316136 - 2316116 - G 81 -8.9 -4.56597 | CCTGCGCCTCAAAAA TGGCGTCGG CAT CCGGCACCA GGGCGTCCGGCGCCC SRU_1873 2316704 - 2316435 - | HPr-like protein crh idsA 2317828 - 2316800 - | polyprenyl synthetase adk 2318488 - 2317850 - | adenylate kinase SRU_1876 2319067 - 2318546 - | hypothetical protein TERM 1376 2318736 - 2318750 + g 72 -5.6 -4.37886 | opp_overlap 2318725, overlap 2318737 ACCACGAGGGGGGCG CGCCCT CGC AGGGCC TTTTCTACCGCCTCC SRU_1877 2319562 - 2319125 - | hypothetical protein TERM 1377 2319548 - 2319532 - G 71 -2.9 -4.57569 | GGAGGTCCGCAAAAA GCCCC TGCGTGT GGGAC GCGATGCGACTCACC SRU_1878 2319674 - 2320102 + | hypothetical protein SRU_1879 2321253 - 2320105 - | hypothetical protein TERM 1378 2321110 - 2321145 + g 89 -11 -4.19746 | GTCCGGCTCCCGCCA GTCCGCGGCGGCGTCG GCAA TGGCGTCGATGCGGGC TTGTTTTGAGCTCAC ispH 2321348 - 2322589 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase SRU_1881 2322682 - 2323425 + | methyltransferase, putative SRU_1882 2323603 - 2324973 + | M20/M25/M40 family peptidase TERM 1379 2325288 - 2325322 + F 73 -6.4 -4.38712 | gap 2 TTTTCCCCGAACATC GCCCCTG--AGCGTCG TTTGC CGGCGCACACAGGGGC TTTTCTGCCGCTGAG SRU_1884 2325773 - 2326888 + | hypothetical protein SRU_1885 2327378 - 2326923 - | zinc transporter TERM 1380 2327688 - 2327677 - R 71 -5.8 -4.36554 | overlap 2327678 CATCATGACAAGAAA GGCT GTCC AGCC GATCGCCAGCAGCTT SRU_1886 2329181 - 2327865 - | CobW/P47K family protein SRU_1887 2331603 - 2329201 - | putative outer membrane receptor protein SRU_1888 2332260 - 2332874 + | hydrolase, NUDIX family protein SRU_1889 2333362 - 2332922 - | NUDIX family hydrolase putative SRU_1890 2334137 - 2333355 - | pyridoxal phosphate phosphatase TERM 1381 2334554 - 2334569 + r 71 -6.2 -4.25104 | TGTACAATATTTCCG CGTTTT GAGT AAAACG TTTTAATGGCACGGC SRU_1891 2337683 - 2337183 - | hypothetical protein TERM 1382 2337765 - 2337710 - R 71 -9.7 -3.69094 | gap 3, opp_overlap 2337711, overlap 2337711 AATTGATGAGGGAAA TCGGGCGC-GTC-GG-TCCGACAGTCGG ACT CCGACAGTCGGAACCCGACAGGGCCCCG TCATATGCACGCCCG SRU_1892 2338421 - 2337819 - | hypothetical protein SRU_1893 2339067 - 2338648 - | hypothetical protein SRU_1894 2340829 - 2339177 - | putative metallopeptidase TERM 1383 2339492 - 2339468 - G 100 -11.4 -5.02074 | CCACTGGTCAAAAAA CGCCTCGAGG TCCTG CCCCGAGACG TCCTCCATGACCGCC SRU_1895 2341561 - 2340851 - | hypothetical protein SRU_1896 2342938 - 2341811 - | hypothetical protein TERM 1384 2341871 - 2341841 - G 74 -7.5 -4.21974 | gap 1, overlap 2341846 CCACCACGCAACAAA GACGACCAGCCCCC CCAC GAGGGC-GCTCGCC ACGGCGTGGAGGCGG TERM 1385 2342883 - 2342854 - G 100 -15.8 -4.62168 | ACCCAAACGACAAAA CCCTCGATTCCG GACGAG CGGAACCGAGGG CTGAGCGGTCCGGAC TERM 1386 2343160 - 2343144 - H 83 -6.5 -4.81851 | overlap 2343147 ATCGAAATTCAAAAA GTACCAG GGG CTGGTCC ACTCACGCAAGGGTG SRU_1898 2343173 - 2343472 + | FmdB family regulatory protein fdx 2343903 - 2343520 - | ferredoxin idi 2344117 - 2344746 + | isopentenyl-diphosphate delta-isomerase, type 1 TERM 1387 2345065 - 2345043 - f 72 -12 -3.28924 | GACCGTCTTCGATAA TGGGCCGTCT CCG AGACGCCCCA TCCCGGGCTGGCGGG TERM 1388 2345751 - 2345737 - g 70 -4.2 -4.56597 | CGCGTCGTCCAAAAA CCGC ATTCCCG GCGG CAACGGCACCATTGC SRU_1901 2345162 - 2345977 + | hypothetical protein TERM 1389 2345978 - 2346015 + F 72 -7.6 -4.13767 | overlap 2345979 GCCGCCGACTCGTGA TCCGCGGGTCGGGA CCGAACATTT TCCCGCCCCCCGGG TTTTCACGTCCACGC gatB 2346090 - 2347616 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1390 2347672 - 2347688 + G 72 -5.7 -4.32034 | overlap 2347674 CGCCCTGTCGGGGCG GTGCGTC CTG GGCGCCC TTTTCCTCGTCGTGC SRU_1903 2347625 - 2349043 + | hypothetical protein SRU_1904 2349075 - 2349734 + | hypothetical protein tpiA 2349782 - 2350564 + | triosephosphate isomerase TERM 1391 2351758 - 2351742 - g 71 -12.3 -3.30124 | GGCCAGCGGCGAGAA CGACCTG CAG CAGGTCG TCCGGACGGCCGTGA SRU_1906 2350591 - 2351904 + | fructose-bisphosphate aldolase TERM 1392 2351948 - 2351977 + T 100 -21.5 -5.76633 | GTACCAGGCCCCGTA GCGTGCCTCCACC GCCC GGTGGGGGCACGC TTTTTTTGTGTCTCA TERM 1393 2352117 - 2352101 - T 79 -9.3 -4.19817 | GGCATGCATGGAAAA CGGGCTC TCA GGGCCCG GCGGCTTCGTCGGCC SRU_1907 2353013 - 2352108 - | hypothetical protein SRU_1908 2353176 - 2354993 + | cell division protein, putative TERM 1394 2356022 - 2356037 + G 84 -6.8 -4.84359 | gap 1, overlap 2356000 GTGGACGCCCTTCAG GCGGTCG ACG CG-CCGC TTTTTCTAACGCTCG SRU_1909 2355029 - 2356873 + | amidohydrolase family protein TERM 1395 2357950 - 2357922 - g 73 -13.1 -3.30124 | overlap 2357923 2357943 CTCCACCGCCTACAA CGCCGCCGTCCTC GCG GAGAACGGCGTCA ACGCGTCCATCAACT SRU_1910 2356951 - 2358378 + | putative amidohydrolase SRU_1911 2358428 - 2359771 + | putative amidohydrolase nadA 2360992 - 2359898 - | quinolinate synthetase nadC 2361903 - 2361049 - | nicotinate-nucleotide pyrophosphorylase SRU_1914 2363524 - 2362028 - | FAD binding domain-containing protein SRU_1915 2364170 - 2363745 - | cellulose-binding domain-containing protein SRU_1916 2367968 - 2364216 - | OB-fold nucleic acid binding domain-containing protein TERM 1396 2367243 - 2367216 - G 75 -7 -4.43477 | GCGATTGAAGGAAAA CGACAGCGAC GGTTGCAG GTCGCTCTCG CGAACCGGAATGAAC TERM 1397 2367626 - 2367614 - G 70 -2.6 -4.62069 | TGTTGATCTGAAAAA GCCC GTTGA AGGC CGAGGTGGTTCCGGT TERM 1398 2368158 - 2368131 - R 83 -7.7 -4.58395 | opp_overlap 2368144 2368147 2368148, overlap 2368132 GTCATTCTCGAAAAA GGGACGGC-CCCC ACGC GGGGCACCG-CCC ATTTTCTTCGACGGT TERM 1399 2368147 - 2368159 + r 74 -4.7 -4.63932 | opp_overlap 2368131 2368132, overlap 2368144 2368148 GGACGGCCCCCACGC GGGGC ACC GCCCA TTTTCTTCGACGGTC SRU_1917 2370414 - 2368204 - | hypothetical protein SRU_1918 2371433 - 2370615 - | hypothetical protein SRU_1919 2375016 - 2371666 - | hypothetical protein SRU_1920 2376269 - 2375370 - | hypothetical protein TERM 1400 2376485 - 2376444 - R 100 -17.3 -4.14739 | opp_overlap 2376449, overlap 2376446 2376451 GTAGGCACTCCAAAA CACGAAACGGGTGGCCGTC TTTC GACGACCACCCGTCTCGAC ACTATCGGCTTTCAA TERM 1401 2376483 - 2376446 - R 100 -24.3 -3.67188 | opp_overlap 2376449, overlap 2376444 2376451 AGGCACTCCAAAACA CGAAACGGGTGGCCGTC TTTC GACGACCACCCGTCTCG ACACTATCGGCTTTC TERM 1402 2376478 - 2376451 - R 100 -19.2 -4.07678 | opp_overlap 2376449, overlap 2376446 2376444 CTCCAAAACACGAAA CGGGTGGCCGTC TTTC GACGACCACCCG TCTCGACACTATCGG SRU_1921 2380029 - 2376514 - | hypothetical protein TERM 1403 2380258 - 2380268 + r 74 -5.4 -4.59773 | AATGGTCGGCTACGC CTTG ATA CAAG TTTTTCAAGATCCGC SRU_1922 2381127 - 2380435 - | hypothetical protein SRU_1923 2381849 - 2381142 - | hypothetical protein SRU_1924 2382145 - 2382576 + | hypothetical protein SRU_1925 2382618 - 2383469 + | carbon-nitrogen family hydrolase SRU_1926 2383973 - 2383497 - | hypothetical protein SRU_1927 2384139 - 2384366 + | hypothetical protein TERM 1404 2385832 - 2385864 + G 74 -15.5 -2.59267 | overlap 2385820 2385831 2385826 GAGCAGCATCGGGCA GGGGCTGTTCGTGGT ACA GCCACGGCCGGCCCC CTTCCTGTCGTTCAC TERM 1405 2385982 - 2385964 - g 77 -13.8 -3.41051 | GGAGGTCGAGCACAA GACGCCCG GGG CGGGCGCC TGGGAGCGCCGGAGA TERM 1406 2386319 - 2386351 + G 77 -9.8 -3.89614 | gap 1, overlap 2386322 ATCCACCGATTCCGC GTCCGTGCCGCCCGG CACG CCA-GCGGCACGTAC TTTCTCCGCATTCGG SRU_1928 2384429 - 2386411 + | hypothetical protein glgC 2386559 - 2387842 + | glucose-1-phosphate adenylyltransferase SRU_1930 2387901 - 2389208 + | glycosyl transferase SRU_1931 2389603 - 2389896 + | hypothetical protein SRU_1932 2391004 - 2390741 - | hypothetical protein SRU_1933 2392224 - 2391001 - | T4 family peptidase TERM 1407 2391225 - 2391244 + g 73 -12.1 -3.35679 | overlap 2391205 2391234 AGTCGGGGCGGGGGG CCGCCGC CCCGGT GCGGCGG TTCTGCGTCGAGAAG TERM 1408 2392098 - 2392075 - G 78 -10.2 -4.07568 | overlap 2392078 GCTCCCGGGCGAAAA GAGCCCGGGG GCGA CCCCGAGGTC CCGCAGGCGGACGGA SRU_1934 2392349 - 2392924 + | RNA polymerase sigma-H factor, putative SRU_1935 2393844 - 2393272 - | hypothetical protein SRU_1936 2393896 - 2395650 + | thrombospondin N-terminal-like domain-containing protein SRU_1937 2395766 - 2396446 + | metallo-beta-lactamase superfamily protein SRU_1938 2396567 - 2397091 + | phosphoesterase SRU_1939 2399027 - 2397738 - | hypothetical protein TERM 1409 2398243 - 2398273 + g 72 -8.3 -4.15006 | gap 2, overlap 2398218 ATCTTGCACCAGGTT CCGGTGGCGGTGCCT TCC AGGT-TCGCC-CCGG TTTTGACGTGCGTCT TERM 1410 2399112 - 2399098 - H 73 -3.4 -4.79683 | AATCTAGAAAACAAA CGCGGC GAT GTCACG ACGAAGGACGCCCCC TERM 1411 2399927 - 2399890 - g 75 -13.3 -3.44051 | CTGGGAGGAGTACAA GGACGCCCGCAAGGCCG AGGC CGGCCTCGCGTAGGCCC CACGGCGGCCCCGTC SRU_1940 2399249 - 2399923 + | putative translaldolase TERM 1412 2400398 - 2400386 - g 71 -3.3 -4.63218 | CCGCCTCCAAGAAAA GCGAC GGG ACCGC GGCGAGACCACGCAC SRU_1941 2400066 - 2401460 + | Ysh1p: subunit of polyadenylation factor I, putative TERM 1413 2401549 - 2401520 - f 76 -8.5 -4.16279 | gap 1, overlap 2401523 GACACGATTCTAAAA CAC-CGGGGACCGT GTG ACGGGCCGCGCGTG GACGTAACCTCTTGG TERM 1414 2404613 - 2404663 + G 81 -16.1 -3.14132 | gap 1, opp_overlap 2404583 2404640, overlap 2404599 GGCCCAGCATCCCGC CGGGCTG-CTCTGGAACGCGATCG AACA CGACCGCTCTCCAGAGGCCGCCCG TTCGTCCCGGCCCGC SRU_1942 2402001 - 2404685 + | FAD linked oxidase TERM 1415 2404669 - 2404708 + T 100 -23.6 -3.55563 | gap 1, overlap 2404670 AGGCCGCCCGTTCGT CCCGGCCCGCCCGCTAGCG CAC CGC-AGCGGGCGGGTCGGA TTTCCGGCGTCCGGT TERM 1416 2404670 - 2404707 + T 100 -27.1 -2.73124 | gap 1, overlap 2404669 GGCCGCCCGTTCGTC CCGGCCCGCCCGCTAGCG CAC CGC-AGCGGGCGGGTCGG ATTTCCGGCGTCCGG ctp 2406342 - 2404732 - | carboxyl-terminal protease TERM 1417 2406518 - 2406533 + H 77 -2.6 -5.00846 | gap 1, overlap 2406518 TCTGGGGAGGCCCCT GG-TGAT GAC ATCAACC TTTTTCTCATATTTA SRU_1944 2406700 - 2407230 + | hypothetical protein pcm 2408045 - 2407353 - | protein-L-isoaspartate(D-aspartate) O-methyltransferase SRU_1946 2408911 - 2408111 - | hypothetical protein TERM 1418 2408597 - 2408630 + g 100 -11.7 -4.56597 | gap 1, overlap 2408598 2408599 AATGATCTGACGCTG GTCGGTCGTGCGGACG AAG CG-CCGCACGATCGGG TTTTTGCCCAGCAGC TERM 1419 2408598 - 2408629 + g 78 -15.2 -3.33744 | gap 1, overlap 2408597 2408599 ATGATCTGACGCTGG TCGGTCGTGCGGACG AAG CG-CCGCACGATCGG GTTTTTGCCCAGCAG TERM 1420 2408599 - 2408628 + g 77 -16.5 -2.60032 | gap 1, overlap 2408598 2408597 TGATCTGACGCTGGT CGGTCGTGCGGACG AAG CG-CCGCACGATCG GGTTTTTGCCCAGCA folP 2409835 - 2408972 - | dihydropteroate synthase TERM 1421 2409575 - 2409601 + g 70 -8.6 -3.90744 | CGTGAGGGCGTCGAT GACGGGCACCAC CCG GTCGCGCTCGTC TTCTTTCGAGACGGG TERM 1422 2410931 - 2410942 + G 81 -3.6 -4.98255 | overlap 2410923 GTGGAGACCTACGGC GCCT CCGA GGGC TTTTTCTCCTTCCAG TERM 1423 2411481 - 2411500 + G 100 -12.2 -4.431 | opp_overlap 2411499, overlap 2411467 ACGGCCCGGACGTGT CGTCCCTT CCGG AAGGGACG TTTTATCGCTGGCTC SRU_1948 2410079 - 2411620 + | GH3 auxin-responsive promoter superfamily protein rpoD 2411767 - 2412708 + | RNA polymerase sigma-70 factor TERM 1424 2412755 - 2412788 + F 100 -23.9 -4.4078 | opp_overlap 2412750, overlap 2412752 TTGCGATGAACGGTC CGGGCGCGTCCCGAC TCCT GTCGGGGTGCGCCCG TTTTCGTTGGGGGCC SRU_1950 2412805 - 2413581 + | hypothetical protein TERM 1425 2413716 - 2413728 + G 75 -9.1 -4.09243 | opp_overlap 2413709 CGATCACAGCTGAAT GGGCT GGA AGCCC TTTTCGCGACGTCTG TERM 1426 2413934 - 2413988 + G 75 -6.9 -4.41348 | gap 2, overlap 2413935 GAGCAGGGCTCGTGC GCGATGGCCCGGGCGGGC-GCCG-CCG TCG CGGACGGCTGCGGGGACGGGTCGTCGA TTTATTTCAACCCCG SRU_1951 2413598 - 2415310 + | long-chain fatty acid transport protein precursor, putative TERM 1427 2415891 - 2415846 - g 73 -9 -3.9392 | gap 2 TTGGATTGGAAATAA CGACGTG-C-TCGACCCCGCCC TTCA GGGCACGGCCAACGTCACGCCG CCGAACACTTTCAGA SRU_1952 2415316 - 2416557 + | hypothetical protein SRU_1953 2417551 - 2416565 - | hypothetical protein SRU_1954 2418566 - 2417601 - | cell division ABC transporter, permease protein FtsX, putative TERM 1428 2418749 - 2418726 - R 76 -9.5 -4.0162 | overlap 2418727 2418729 GGTGGAGACGACAAA CGAGGGCGC TGTTTT GCGCCCTCC GCCTCGGGAGGCAGC TERM 1429 2418748 - 2418727 - R 71 -13 -3.00651 | overlap 2418726 2418729 GTGGAGACGACAAAC GAGGGCGC TGTTTT GCGCCCTC CGCCTCGGGAGGCAG pheA 2419757 - 2418897 - | prephenate dehydratase TERM 1430 2419901 - 2419861 - R 100 -13.9 -4.62069 | overlap 2419866 TCCGCACCGGAAAAA GGAAACGCCTGACCGGACC GGT GGCCCGACCAGGCGTCACG ATGCGCTTACAGGTC TERM 1431 2419896 - 2419866 - R 100 -19 -4.32649 | overlap 2419861 ACCGGAAAAAGGAAA CGCCTGACCGGACC GGT GGCCCGACCAGGCG TCACGATGCGCTTAC SRU_1956 2420440 - 2420003 - | heat shock protein TERM 1432 2420120 - 2420165 + g 74 -14.7 -3.05268 | gap 1, opp_overlap 2420144 2420145, overlap 2420123 CGCGTCCGGCAGGGT GAACGTGCG-GTGGAAGGTGCC AAA GGCGCGCTCCACGCGCACGTAC TCTTCGCCGTCCTTC TERM 1433 2420123 - 2420162 + g 72 -15 -2.74523 | gap 1, opp_overlap 2420144 2420145, overlap 2420120 GTCCGGCAGGGTGAA CGTGCG-GTGGAAGGTGCC AAA GGCGCGCTCCACGCGCACG TACTCTTCGCCGTCC SRU_1957 2422111 - 2420657 - | endonuclease/exonuclease/phosphatase family protein SRU_1958 2422310 - 2423035 + | phosphoglycerate mutase family protein SRU_1959 2424168 - 2423095 - | hypothetical protein TERM 1434 2423569 - 2423518 - G 70 -9.8 -3.6502 | overlap 2423523 GAGGTCCGACGGAAA CAGATCGTCGAGGGTCGCCGCCCC TCGC GGCGCGTCGGCCCGGGACGCCCCG CCCCCCTGACCCGCT TERM 1435 2424240 - 2424209 - H 71 -13 -3.10612 | opp_overlap 2424215 CGCAACTGGAAGAGA CGGCGGGCAGAC GTTGCATT GTCTGCCCCCCG ACATCATCCCCAACT TERM 1436 2425125 - 2425107 - g 77 -13.1 -3.53811 | CCCATTCCGCCCAAA CCCCGCG GCCGA CGCGGGG CGCCTGCAGGCCGGG TERM 1437 2425451 - 2425478 + G 70 -8.4 -3.90291 | gap 1, opp_overlap 2425451 GCAACGTCGAGTACA TCGTCG-ACGGCG CCA CGCTGGACGACGA TTTCCTTGACGACCT SRU_1960 2424397 - 2425695 + | hypothetical protein dut 2426180 - 2425728 - | deoxyuridine 5`-triphosphate nucleotidohydrolase SRU_1962 2428077 - 2426242 - | proton/peptide symporter family protein TERM 1438 2426957 - 2426938 - G 77 -12.1 -3.71649 | CTGCGAAAGCGCAAA CGGCCCG AAGTCG CGGGCCG TGAGGTCCCGGGCGA TERM 1439 2429610 - 2429558 - g 70 -11.8 -3.44319 | CGGAATCGAGCAGAA CCTGAGCAGCGACGCCCTGCCC CACGAGTAC GGGCGGGCCGCCGCCGAGCAGG TGGGCGCCGAGGCGG aspS 2428395 - 2430284 + | aspartyl-tRNA synthetase SRU_1964 2430295 - 2430753 + | hypothetical protein SRU_1965 2431121 - 2430771 - | hypothetical protein SRU_1966 2433143 - 2431242 - | pyruvate dehydrogenase beta subunit TERM 1440 2431452 - 2431419 - G 70 -10.9 -3.53224 | opp_overlap 2431430 2431431 CACCTCGGCCCCAAA GCCCGCGGTGCGCGA CGCC TCGTGCAACACGAGC AGGCGGTTTGTTTTG TERM 1441 2431430 - 2431458 + g 75 -2.9 -4.77173 | opp_overlap 2431419, overlap 2431431 CAAAGCCCGCGGTGC GCGACGCCTCGTG CAA CACGAGCAGGCGG TTTGTTTTGTCGAGC SRU_1967 2434050 - 2433337 - | TonB family protein SRU_1968 2434973 - 2434170 - | transcriptional regulator, Icc related protein TERM 1442 2434779 - 2434757 - G 79 -10.6 -3.93695 | GCCACCACGGATAAA CGTCGTGG TTGCCCG CCACGACG AGGGTGGGCGGGCCC TERM 1443 2434813 - 2434844 + g 72 -11.5 -3.50393 | gap 1 GCGTCGAGCAGGTTT CGGGCC-GCCCGGT ACTCC GCCGGACGGGCCCG TTGTGTCAGGTCGCC SRU_1969 2436404 - 2435007 - | dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex TERM 1444 2436479 - 2436451 - R 74 -10.1 -3.75897 | opp_overlap 2436459, overlap 2436452 2436468 AATGTCGAATGTAAA GGGGCACGGGCCC CAA AGGCCCGCGCCGA GCGCCGGGGCTTGCG TERM 1445 2436478 - 2436452 - R 74 -13.6 -2.85056 | opp_overlap 2436459, overlap 2436451 2436468 ATGTCGAATGTAAAG GGGCACGGGCCC CAA AGGCCCGCGCCG AGCGCCGGGGCTTGC SRU_1970 2437483 - 2436500 - | pyruvate dehydrogenase E1 component, beta subunit TERM 1446 2437004 - 2436977 - G 74 -9.8 -3.86897 | gap 1, opp_overlap 2436976 CTCACTCTCGAGAAA GACCA-CCGGGTC GTC GTCCCGGATGGCC GTCTTGAGCAGCCCC TERM 1447 2437164 - 2437193 + g 75 -11.5 -3.7282 | gap 1, opp_overlap 2437147, overlap 2437164 GGGACGTCGAACTGG C-CGCCCGACATGT AGC GCATGTTGGGCGCG TTGTTGATGACCTGG SRU_1971 2438991 - 2437579 - | pyruvate dehydrogenase E1 component, alpha subunit TERM 1448 2438204 - 2438237 + g 75 -2.9 -4.77567 | overlap 2438205 CCCGCGCCGAGCGGC AGGTGGGCGCCGACG ATGG CGTGCCCGCCCATCA TTTTCTTCTCGGCGT SRU_1972 2439217 - 2440098 + | glycosyl transferase, group 2 family protein TERM 1449 2440658 - 2440648 - g 75 -3.2 -4.72272 | CTCGCCGATGAAAAA TCCG GAG CAGA TGGACATGGTCACGT icd 2440244 - 2441479 + | isocitrate dehydrogenase, NADP-dependent TERM 1450 2441544 - 2441518 - f 71 -13.7 -2.64144 | opp_overlap 2441518, overlap 2441517 2441515 CCCTCAGCGAAAGAG CGGCATCGTGG CGGCC CCACGGTGCCG TTTTTCTGTTTGCCC TERM 1451 2441518 - 2441544 + F 100 -15.9 -5.19879 | opp_overlap 2441518 2441517 2441515 CCCTCAGCGAAAGAG CGGCATCGTGG CGGCC CCACGGTGCCG TTTTTCTGTTTGCCC SRU_1974 2441539 - 2442234 + | hydrolase, NUDIX family protein SRU_1975 2443482 - 2442244 - | pyridine nucleotide-disulphide oxidoreductase family protein SRU_1976 2443846 - 2443562 - | hypothetical protein SRU_1977 2443976 - 2444614 + | TetR family transcriptional regulator SRU_1978 2444664 - 2446076 + | outer membrane efflux family protein, putative TERM 1452 2446347 - 2446333 - g 76 -8.6 -4.25104 | CCCTCTCCACCAAAA TGATGG GCA CCATCA CGCGCCTCTCGGTCG SRU_1979 2446098 - 2447219 + | acriflavin resistance protein AcrE, putative SRU_1980 2447266 - 2450511 + | AcrB/AcrD/AcrF family transporter SRU_1981 2450815 - 2451141 + | hypothetical protein SRU_1982 2452082 - 2451468 - | hypothetical protein SRU_1983 2452725 - 2452096 - | SAM-dependent methyltransferase SRU_1984 2453753 - 2452764 - | hypothetical protein TERM 1453 2454123 - 2454107 - g 72 -4.3 -4.56597 | overlap 2454085 CGCCGCCCCGAAAAA TCGGTGC GTG GCGCCAA CTGGCCGGACCTGGA SRU_1985 2453804 - 2454838 + | universal stress protein SRU_1986 2454944 - 2455867 + | metalloenzyme superfamily protein SRU_1987 2458097 - 2455872 - | hypothetical protein SRU_1988 2460096 - 2458153 - | hypothetical protein TERM 1454 2459506 - 2459488 - G 71 -3 -4.67755 | overlap 2459490 AGAGGGATCGAAAAA GTGGTTGG GGG CCAACGGC TGCCCCTCCGACGTG SRU_1990 2461103 - 2460591 - | hypothetical protein TERM 1455 2461131 - 2461115 - H 76 -5.8 -4.57569 | gap 1 CCATCGGTGGAAAAA CGCCTCC TATC GG-GGCG TCGGCTGTGAGGGAT TERM 1456 2461669 - 2461691 + G 72 -14.8 -2.78712 | overlap 2461666 GCCGGCCGCGATGCC GGTCCCCCGC GGC GCGGAGGACC TGATTGCCTTCGCCG TERM 1457 2461742 - 2461720 - g 70 -2.6 -4.6902 | overlap 2461712 2461721 CGAGAAGGCCAAAAA CGGCGGCA ACTACAA TGCGGCCA ACGCGGCCTTCGCCC SRU_1991 2461319 - 2462098 + | hypothetical protein SRU_1992 2462647 - 2462171 - | light- and oxygen-sensing histidine kinase TERM 1458 2462665 - 2462702 + H 74 -10.5 -3.72893 | gap 1, opp_overlap 2462651 2462655 AGAATCGGGGTTCGA CCCT-CGGGAGTTGTCGC CAC GCGGCGCCTCCCGTACGG TTTCCTGCAGCGGTC SRU_1993 2462842 - 2463333 + | hypothetical protein SRU_1994 2463740 - 2463396 - | hypothetical protein TERM 1459 2464354 - 2464378 + G 83 -2.7 -5.16841 | overlap 2464360 CTTTGCCTCCATCCA CGAGCAGGAGG ACA CCTTCTTTCCG TTTTTCTTCCTCTCC TERM 1460 2465844 - 2465833 - g 89 -2.2 -5.36441 | GGTCGAGATAAAAAA CCAG CACA CTGA TTTTCTGGTTACCCC SRU_1995 2464166 - 2467654 + | putative DNA polymerase II TERM 1461 2468811 - 2468841 + G 100 -15.3 -4.62069 | GTCGCAGGGCGTCAC CGCCACGGCCACC ACCGC GGAGGCCGGGGCG TTTTTCCAGTACACC SRU_1996 2467756 - 2469786 + | hypothetical protein SRU_1997 2469993 - 2470184 + | hypothetical protein TERM 1462 2470335 - 2470347 + F 78 -10.5 -3.99324 | TGAGTCCCGGCGTGC CGCCC TGT GGGCG TTTCTCGTCGTGAGC panF 2470577 - 2472079 + | pantothenate permease TERM 1463 2472267 - 2472236 - g 78 -10 -4.11692 | overlap 2472252 GAGCCAGGCCCAAAA TCGGGACACCGACG AACT CGGCGGCGCCCTGA GCAGCATCGGCCAGC SRU_1999 2472096 - 2473160 + | hypothetical protein ppa 2473828 - 2473283 - | inorganic pyrophosphatase SRU_2001 2474769 - 2474101 - | hypothetical protein TERM 1464 2474634 - 2474674 + g 73 -12.5 -3.4268 | overlap 2474632 2474665 CATCGGCGTGGTCTC GGATGCGGTTGAGCCGGTA GGC TGCCGGCTCGTCGGAATCC TCTTTCGACTTCTCG SRU_2002 2475870 - 2474884 - | hypothetical protein TERM 1465 2475968 - 2475958 - R 71 -8.2 -3.9281 | overlap 2475959 ATCAGCCTTAAACAA CGGG GCC CCCG CCGCGAAATCAACTT SRU_2003 2476894 - 2476043 - | NAD-dependent epimerase/dehydratase family protein SRU_2004 2477830 - 2477030 - | Type I restriction enzyme R protein N terminus (HSDR_N) TERM 1466 2477270 - 2477296 + g 74 -12.2 -3.50393 | CGCGACAAACTGGAC CAGCGGCGCGTC GGG GGCGTCCCGCTG TTGTGTGAGGTACGA SRU_2005 2479159 - 2478047 - | esterase superfamily TERM 1467 2478099 - 2478080 - G 79 -3.6 -4.85599 | gap 1, overlap 2478081 2478082 2478085 2478088 2478089 CCGACCCGAGAAAAA CGGAAGAAC GTG GTTCT-CCA CCCGCGCGTCGATCC SRU_2006 2482777 - 2479205 - | hypothetical protein TERM 1468 2482319 - 2482295 - G 70 -10.6 -3.55444 | CGCGTATTCGCCAAA GCCGAGCGCC CCGGC GGCCCCCGGC ACGTCGTACCCGCCC SRU_2007 2484081 - 2482774 - | Ser/Thr protein phosphatase family protein TERM 1469 2484127 - 2484106 - H 72 -4.3 -4.59853 | CGAAGTGGCGAAAAA CGAGAGCGG TATG CGGGTCTCG CAAAACTGCGCGGGG TERM 1470 2484320 - 2484364 + H 100 -12.2 -5.36441 | gap 2 CACGTAGCTGTGGGC GCCCCACGTCGG--TAGTCCCT TCC AGAGACCAATCCGGCGTGGGGC TTTTTTATGTCGACC TERM 1471 2485150 - 2485178 + G 82 -11.5 -4.08706 | opp_overlap 2485100 CGGCGCCGCCATCAC GACGCCCGCGGGC CAT GCGCTCGGGCGGC TTTGTGTGCTCGACC TERM 1472 2485834 - 2485812 - g 91 -12.6 -4.21936 | overlap 2485804 TCCACAACGCCAAAA CGGGCGCCCC GGT GGAGAGCCCG GTCCAGAAAGTCCTG TERM 1473 2486452 - 2486464 + G 76 -2.6 -4.87626 | GCGGTTCGCCGAAAA CGTG CAGGA CGCG TTTTTCCTGTTGCCG TERM 1474 2487140 - 2487152 + G 71 -3.3 -4.65895 | overlap 2487107 GGCCTCCGTGCCTGC TGGTC GGT GCCCA TTTTTGACTCCAACG SRU_2008 2484929 - 2488555 + | sensory box histidine kinase/response regulator SRU_2009 2489155 - 2488784 - | hypothetical protein SRU_2010 2489737 - 2489216 - | putative transposase, orfB SRU_2011 2490267 - 2489797 - | putative transposase, orfA SRU_2012 2491451 - 2490315 - | hypothetical protein TERM 1475 2491735 - 2491750 + H 86 -5.4 -5.20781 | gap 1, overlap 2491735 CTTCCTGCTTCGGAC GGGG-AG ACA CTACCCC TTTTATTTTATGGTA TERM 1476 2491908 - 2491892 - g 74 -2.1 -4.8083 | overlap 2491894 GAACATTATCAAAAA CGGCCAC AGC GCGAGCG GCTCTCAGCAATACC SRU_2013 2491836 - 2492114 + | ISSru2, transposase insA TERM 1477 2492877 - 2492834 - f 72 -13.8 -2.80816 | gap 1 CGCTCAGCGACCAGA GCGGCAAC-GGCCAGCTCAAG CGG CGCGAGTCGGCCGGTCGCCGC CCGCGAACGAGCGTT TERM 1478 2493324 - 2493294 - g 71 -14.1 -2.91144 | gap 1, overlap 2493291 GCAGCTTCCAAAGCA CCCGCTCCGT-CGT GGGC ACGGACGGAGCGGA CTTCGAGCTTCCCGT SRU_2015 2493035 - 2496055 + | hypothetical protein SRU_2016 2497102 - 2496734 - | hypothetical protein SRU_2017 2498404 - 2497106 - | hypothetical protein SRU_2018 2499310 - 2498447 - | hypothetical protein lacD 2500505 - 2499447 - | tagatose 1,6-diphosphate aldolase SRU_2020 2501515 - 2501129 - | membrane flanked domain-containing protein SRU_2021 2502263 - 2502093 - | hypothetical protein TERM 1479 2502367 - 2502385 + r 73 -8.1 -3.98214 | CACCGATCCCAGTCG GAGGGCG CCACT CGTCCTC TTTCTCCTGCATCGT ppa 2503164 - 2502493 - | inorganic pyrophosphatase SRU_2023 2504117 - 2504395 + | ISSru3, transposase insA SRU_2024 2504359 - 2504835 + | ISSru3, transposase insB TERM 1480 2504907 - 2504891 - f 82 -5.7 -4.85782 | overlap 2504893 GTCCGGAAAAACAAA CGCACCG GAG CGGCGAG AGCAGAATCGAATTC TERM 1481 2507894 - 2507914 + G 77 -12.5 -3.65529 | TCCATTATCTCAGCG GCCGCACCG TGT CGGTGGGGC TTTCAATGGAGCTCT SRU_2025 2504947 - 2507931 + | TonB-dependent receptor, putative TERM 1482 2507959 - 2508004 + F 100 -17.6 -5.56673 | overlap 2507962 AGGTTGAGTCGGCCT CGGCACGTCCCCCTTCCTCC CCGCCT GGAGGAGGGGAGGCGTGTTG TTTTTTCTTGTCCCT TERM 1483 2507962 - 2508001 + F 100 -17.9 -4.84921 | overlap 2507959 TTGAGTCGGCCTCGG CACGTCCCCCTTCCTCC CCGCCT GGAGGAGGGGAGGCGTG TTGTTTTTTCTTGTC SRU_2026 2508041 - 2509819 + | Ser/Thr protein phosphatase family protein SRU_2027 2509961 - 2511733 + | hypothetical protein SRU_2028 2512948 - 2511914 - | putative cation transporter TERM 1484 2512281 - 2512302 + g 70 -12.9 -3.04263 | opp_overlap 2512249 TCGGAGAGGCCCGTC CGGGCGGCC ACCT GCCCGCCCG TCTTGGCGATCACGT SRU_2029 2513688 - 2514665 + | hypothetical protein SRU_2030 2514824 - 2515249 + | hypothetical protein TERM 1485 2515724 - 2515738 + G 79 -8.5 -4.40003 | GATACGTTTCATTTT GGGGC CTGGT GCCCC TTTGTCTTTCTGGGA SRU_2031 2515334 - 2516173 + | hypothetical protein SRU_2032 2516747 - 2517133 + | hypothetical protein TERM 1486 2517493 - 2517444 - f 70 -10.2 -3.54424 | gap 3, opp_overlap 2517451, overlap 2517451 GGCGACTGTTCCAAA CAGAAAACGCCCCTTAGATCGCCGG TTA CAGGCG--CTGAGGGGCGTTTT-TG ATGCTGTCGCTATGT TERM 1487 2517451 - 2517487 + F 100 -11.6 -4.79223 | gap 2, opp_overlap 2517451 2517444 GTTCCAAACAGAAAA CGCCCCTTAGATCGCCGG TTA CAGGCG--CTGAGGGGCG TTTTTGATGCTGTCG TERM 1488 2517487 - 2517451 - f 93 -9.4 -4.78848 | gap 2, opp_overlap 2517451, overlap 2517444 GTTCCAAACAGAAAA CGCCCCTTAGATCGCCGG TTA CAGGCG--CTGAGGGGCG TTTTTGATGCTGTCG SRU_2034 2517751 - 2519823 + | acyl-peptide hydrolase, putative TERM 1489 2519846 - 2519824 - f 74 -12.6 -3.36452 | ACGCCTGAACAGTAA GGCGGCGCGA GGC CCGCGGCGCC CACTCGCCAGCCCCC TERM 1490 2519959 - 2519926 - f 73 -6.5 -4.3739 | GAGTCGGGGACAAAA GCCCAGCACCCACCC GGGA GGGTTGGAACCCGGC CCGGCACCATGCCGT TERM 1491 2520106 - 2520130 + F 100 -18.7 -5.45802 | opp_overlap 2520106 CCCGGGGAGCCGAAA GCCCGATTGGA CGG TCCAATCGGGC TTTTTCTTTTGCCAC TERM 1492 2520130 - 2520106 - f 100 -18.7 -3.59979 | opp_overlap 2520106 CCCGGGGAGCCGAAA GCCCGATTGGA CGG TCCAATCGGGC TTTTTCTTTTGCCAC SRU_2036 2520369 - 2520956 + | fasciclin domain-containing protein TERM 1493 2521737 - 2521694 - g 73 -13 -3.32268 | overlap 2521697 GAAGCAGTCCGAGAA GATGCACGCCCTCGGCCGCG TGGG CACGCCCGAGGACGTGGCCC CGGCGGTCACGTGGC TERM 1494 2521734 - 2521697 - g 73 -15.5 -2.53271 | overlap 2521694 GCAGTCCGAGAAGAT GCACGCCCTCGGCCGCG TGGG CACGCCCGAGGACGTGG CCCCGGCGGTCACGT SRU_2037 2521074 - 2521832 + | short chain dehydrogenase/reductase family oxidoreductase SRU_2038 2521943 - 2523487 + | deoxyribodipyrimidine photolyase-like protein protein TERM 1495 2523811 - 2523838 + F 100 -17.8 -4.78848 | gap 1 GTTGCCAGCGCCCGT CGCCTCTC-CGGC CCC GCCGCGAGAGGCG TTTTCTATTTGCCCC SRU_2039 2523867 - 2524820 + | cysteine synthase B SRU_2040 2524966 - 2525403 + | Mov34/MPN/PAD-1 family protein SRU_2041 2525463 - 2525756 + | ThiS family protein SRU_2042 2525937 - 2527154 + | MoeZ/MoeB domain-contain protein TERM 1496 2527232 - 2527189 - T 100 -12.5 -4.46212 | gap 1, opp_overlap 2527196, overlap 2527190 2527192 2527195 2527196 GTCTCCACCACAAAA CCACAAGCGGGACCCGTGGC TCAGC GCCAGGGGTCCCG-TTGTAT GTGTCTCCAATGTGC TERM 1497 2527231 - 2527190 - T 88 -16 -3.27406 | gap 1, opp_overlap 2527196, overlap 2527189 2527192 2527195 2527196 TCTCCACCACAAAAC CACAAGCGGGACCCGTGGC TCAGC GCCAGGGGTCCCG-TTGTA TGTGTCTCCAATGTG TERM 1498 2527229 - 2527192 - T 86 -16.4 -3.20028 | gap 1, opp_overlap 2527196, overlap 2527190 2527189 2527195 2527196 TCCACCACAAAACCA CAAGCGGGACCCGTGGC TCAGC GCCAGGGGTCCCG-TTG TATGTGTCTCCAATG TERM 1499 2527227 - 2527195 - T 88 -14.8 -3.73008 | opp_overlap 2527196, overlap 2527192 2527190 2527189 2527196 ACCACAAAACCACAA GCGGGACCCGTGGC TCAGC GCCAGGGGTCCCGT TGTATGTGTCTCCAA TERM 1500 2527196 - 2527226 + T 100 -18.3 -3.66896 | opp_overlap 2527195 2527192 2527190 2527189 2527196 CCACAAAACCACAAG CGGGACCCGTGGC TCAGC GCCAGGGGTCCCG TTGTATGTGTCTCCA TERM 1501 2527226 - 2527196 - T 90 -18.3 -2.8272 | opp_overlap 2527196, overlap 2527195 2527192 2527190 2527189 CCACAAAACCACAAG CGGGACCCGTGGC TCAGC GCCAGGGGTCCCG TTGTATGTGTCTCCA SRU_2043 2527714 - 2527280 - | hypothetical protein TERM 1502 2527897 - 2527885 - R 83 -9.1 -4.36914 | CGGGCTGTCAGAAAA TGGCC TAA GGCCA CGCTCGCTCCATTGA TERM 1503 2528161 - 2528187 + r 76 -12.9 -3.53444 | opp_overlap 2528148 2528146 2528141 CAGACCCCCACGGAT CCCCGCGCCGG TCCGT CGGGCGTGGGG TTTACGAAACAATCA valS 2530916 - 2528211 - | valyl-tRNA synthetase SRU_2045 2531186 - 2531839 + | iron dependent repressor, putative SRU_2046 2531858 - 2533378 + | hypothetical protein SRU_2047 2533813 - 2533391 - | hypothetical protein TERM 1504 2533767 - 2533736 - G 72 -8.7 -4.1021 | overlap 2533732 GGCGAGAAGCAGAAA CG-CGCGACACGCCG GAGT CGG-GCGCCGCGTCG GCAACGCGCCCGTCG TERM 1505 2533827 - 2533808 - G 72 -5.6 -4.386 | overlap 2533817 CAATTCCGGACAAAA CCCCACAG ACGC CTGCCGGG GATGATCCCCGGGCC SRU_2048 2536675 - 2533847 - | putative two-component system sensory/regulatory protein, putative TERM 1506 2537100 - 2537128 + r 83 -15.9 -3.14132 | CACTTCGATCATGCA GGGGCGATCCAGC CAG GCGGGAACGCCCC TTACTCCAGCAGAAG SRU_2049 2537884 - 2537129 - | hypothetical protein SRU_2050 2538356 - 2538153 - | hypothetical protein SRU_2051 2539006 - 2538506 - | hypothetical protein SRU_2052 2540297 - 2539014 - | hypothetical protein TERM 1507 2539445 - 2539463 + g 95 -5.2 -5.42259 | opp_overlap 2539448 GTGTACCGTCGGAGA GTATGGGA GCA TCCCACGC TTTTTTTCGCCCTCC SRU_2053 2541096 - 2541716 + | hypothetical protein SRU_2054 2542618 - 2541809 - | glyoxalase family protein SRU_2055 2543331 - 2542705 - | hypothetical protein SRU_2056 2543802 - 2543446 - | nitrogen regulatory protein P-II SRU_2057 2546307 - 2543854 - | hypothetical protein TERM 1508 2545441 - 2545457 + g 71 -13.7 -2.82015 | CGGGCGGCCCGCGTC CGACCCC GAC GGGGTCG TCTGCTGCGTCTGCC SRU_2058 2547736 - 2546297 - | NADH dehydrogenase, putative TERM 1509 2547851 - 2547813 - R 100 -18.9 -5.72622 | CCCACAAAGAAAAAA GACCGACACGCAGCGCC ATCAG GGCGCTGAATGTCGGCC TACAGTCGTTGCACC TERM 1510 2548111 - 2548090 - R 78 -2.8 -5.0916 | opp_overlap 2548091, overlap 2548091 GGCTGAACACAAAAA CGCGCTCG CCGGTC CGGGCGCT GATGTCGGTGTGCAT SRU_2059 2549310 - 2548540 - | DnaJ domain-containing protein crtI 2550930 - 2549320 - | phytoene dehydrogenase TERM 1511 2550503 - 2550521 + g 70 -10.2 -3.73968 | opp_overlap 2550481, overlap 2550516 TACCCGTCCACGTCC TCCGGCGC GAA GCGGCGGA TTTCCTCCACCATTT SRU_2061 2551872 - 2551069 - | hypothetical protein SRU_2062 2554819 - 2552102 - | sensory box sensor histidine kianse/response regulator TERM 1512 2553682 - 2553692 + g 72 -8.2 -4.14392 | TGTCGCGGTAGGTGA CGGC CAC GCCG TTTTCCACCTTGACG TERM 1513 2555015 - 2555032 + r 71 -14.1 -2.68015 | overlap 2555014 CCGCATCGCCGCAGG CGGGCCG TCCA CGGCCCG GTTCTACTCGTTCGG aroC 2556250 - 2555036 - | chorismate synthase SRU_2064 2557875 - 2556331 - | protease degQ precursor TERM 1514 2557930 - 2557914 - R 83 -9.4 -4.26344 | AGATCGGGATGAAAA GCCCAC CTTGC GTGGGC AAAATTGTTTCCCCT SRU_2065 2561318 - 2558088 - | two-component system sensor histidine kinase/response regulator, hybrid, putative TERM 1515 2561879 - 2561840 - H 100 -20.8 -3.53224 | opp_overlap 2561841 2561845, overlap 2561841 2561845 GAGGCTGGTTGTAAA TGAAACGCCAGGACGGCC GGAC GGCCCTCCTGGCGTTTCT ATATGTGCCCTGCTT TERM 1516 2561841 - 2561878 + H 100 -24.3 -3.002 | opp_overlap 2561840 2561841 2561845, overlap 2561845 AGGCTGGTTGTAAAT GAAACGCCAGGACGGCC GGAC GGCCCTCCTGGCGTTTC TATATGTGCCCTGCT TERM 1517 2561878 - 2561841 - H 100 -24.3 -2.71791 | opp_overlap 2561841 2561845, overlap 2561840 2561845 AGGCTGGTTGTAAAT GAAACGCCAGGACGGCC GGAC GGCCCTCCTGGCGTTTC TATATGTGCCCTGCT TERM 1518 2561874 - 2561845 - H 100 -19.3 -4.05788 | opp_overlap 2561841 2561845, overlap 2561841 2561840 TGGTTGTAAATGAAA CGCCAGGACGGCC GGAC GGCCCTCCTGGCG TTTCTATATGTGCCC TERM 1519 2561845 - 2561874 + H 100 -19.3 -4.17296 | opp_overlap 2561845 2561841 2561840, overlap 2561841 TGGTTGTAAATGAAA CGCCAGGACGGCC GGAC GGCCCTCCTGGCG TTTCTATATGTGCCC SRU_2067 2562003 - 2562926 + | histone deacetylase/AcuC/AphA family protein hemK 2563830 - 2562919 - | hemK protein SRU_2068 2564156 - 2563869 - | acylphosphatase TERM 1520 2564125 - 2564136 + g 72 -7.2 -4.20531 | CGCCCTGTAATTCGT GCGG ACAC CCGC TTTTCCGTCCCTGTC TERM 1521 2564284 - 2564251 - R 100 -18.2 -3.76373 | gap 2 GTCCCAACACGGAAA CGCCCCG-CC-GCCGG TCGT CCGGCAGGGCGGGGCG CAGCGCTAGCGTCTC phhA 2565157 - 2564321 - | phenylalanine 4-monooxygenase SRU_2070 2565553 - 2565341 - | ABC transporter, permease protein SRU_2071 2566232 - 2565633 - | hypothetical protein TERM 1522 2566116 - 2566088 - G 72 -13.1 -3.19602 | opp_overlap 2566091, overlap 2566086 2566091 GGTTGCACATGAACA CGACGACGAGGGC GTC GGCCTCGTCGTAG TCTGCGAGCGAGCGC nadD 2566963 - 2566376 - | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 1523 2566961 - 2566951 - G 71 -3.2 -4.58663 | AGGACCCCCCAAAAA GACC AAC AGTC ATGGGCACGATGGGC SRU_2073 2567847 - 2566993 - | TPR repeat-containing protein SRU_2074 2569709 - 2568015 - | TPR repeat-containing protein TERM 1524 2568206 - 2568186 - G 86 -8.9 -4.72272 | GGTGGTTAGCAAAAA GCGGGCGAC GTC GTAGCCCAC GTAGGCCAGGCGACG guaA 2571370 - 2569790 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1525 2570279 - 2570298 + g 73 -6.4 -4.30576 | gap 1 GAGCTCTTCGGGCAG CCCGCCGAC GTT GT-GGTGGG TTTTGATGGTGACGG gcvH 2571862 - 2571488 - | glycine cleavage system H protein TERM 1526 2571946 - 2571931 - R 72 -3.9 -4.55128 | overlap 2571908 2571933 AGCGGCAAATCAAAA GACCG CGCGTC CGGCC GTGCACGGCACGTCC coaD 2572517 - 2572023 - | pantetheine-phosphate adenylyltransferase SRU_2078 2573166 - 2572552 - | hypothetical protein TERM 1527 2573280 - 2573292 + r 95 -10.5 -4.49958 | opp_overlap 2573257, overlap 2573267 ACGGCGGTGGCGTCC GGGGC CCC GCCCC TTTCTTTCCTCGCGT SRU_2079 2574283 - 2573315 - | hypothetical protein TERM 1528 2573684 - 2573700 + g 73 -13.7 -3.10715 | CTCGTCTGCATCGTC CGCCGAC ATC GTCGGCG TTCCATCCTCCTCCG TERM 1529 2575340 - 2575313 - g 72 -13.4 -3.09834 | gap 1 GAGGTCACCACGGAA GGCGGGCTCGACG TCA CGGCGAG-CCGCC CCCGCCTCAACGCCG pdxJ 2575007 - 2575738 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 1530 2575935 - 2575919 - g 74 -2.2 -4.72986 | gap 1, overlap 2575921 2575930 GATCGTCACCAAAAA GCCGCAG ACCA CC-CGGC ACCGCGTCCTCGGCA era 2575776 - 2576690 + | GTP-binding protein Era pdxB 2577881 - 2576703 - | erythronate-4-phosphate dehydrogenase TERM 1531 2577100 - 2577153 + g 73 -13.2 -3.29144 | gap 3 GCGTACCCGGCGATG TGGGGCGTCGCCAGGTCCACGGC-CTC GAT GAGCGCCG-GG-TCGGGCGACGGCTCA TTCTCCCACACGTCC SRU_2083 2578228 - 2578959 + | hypothetical protein SRU_2084 2579693 - 2579052 - | hypothetical protein TERM 1532 2580143 - 2580123 - g 70 -13.3 -3.05384 | GTCGTGGCCACCGAA CTCGGCAAG GCC CTCGCCGAG CGCGACCACGAAATC SRU_2085 2580063 - 2581211 + | glycosyl transferase, group 1 family protein SRU_2086 2581872 - 2581222 - | metallo-beta-lactamase family protein TERM 1533 2582079 - 2582093 + G 71 -3.4 -4.62783 | overlap 2582075 2582080 TGGATCGTACTGCGT CGGCTC CCG GGGCCC TTTTTCGGGTGGCTG TERM 1534 2582127 - 2582138 + G 84 -5.8 -4.88407 | ACACTCATGTTTCTG CTGC TGAT GCAG TTTTTGATTCGGTGG SRU_2087 2582046 - 2583467 + | hypothetical protein SRU_2088 2583516 - 2584184 + | tetrapyrrole methylase family protein SRU_2089 2584366 - 2584905 + | hypothetical protein SRU_2090 2584988 - 2587924 + | hypothetical protein cspa 2588205 - 2588537 + | hypothetical protein SRU_2092 2588577 - 2589050 + | hypothetical protein yfiA 2589151 - 2589549 + | ribosomal subunit interface protein TERM 1535 2589576 - 2589614 + T 100 -22.5 -4.77165 | gap 1, opp_overlap 2589566 2589537 2589535 AACGACGTCCCTTTC GACGGGCTCGGC-ACCGG CGTC CCGGCCGCCGAGCCCGTC TTTTGTTCTGGAGGG metF 2590617 - 2589658 - | 5,10-methylenetetrahydrofolate reductase TERM 1536 2590631 - 2590642 + H 72 -4.4 -4.59982 | ATGCGGTCCGTGATA TTCG GTTG CGAA TTTGTTTGATTGTGG TERM 1537 2591237 - 2591279 + G 78 -14.6 -3.33696 | CGACGGGGACACCGG CACGGCCGCGGATCGGCGGG AGG CACACCGGGCCGTGGCCGCG TTCCTTCAACGGCAC SRU_2095 2590710 - 2591321 + | Mta/Sah nucleosidase (P46) [includes: 5'-methylthioadenosine nucleosidase and S-adenosylhomocysteine nucleosidase], putative SRU_2096 2591706 - 2591341 - | hypothetical protein SRU_2097 2592242 - 2591793 - | CAA(3)-type oxidase subunit IV SRU_2098 2593010 - 2592309 - | hypothetical protein coxA1 2594797 - 2593052 - | cytochrome oxidase subunit I TERM 1538 2594882 - 2594841 - R 72 -4.2 -4.58395 | opp_overlap 2594844, overlap 2594843 2594844 2594846 TGCACGGCTGAAAAA CAGCAGCAGGGGCCCGAG CGTCCC CTCGGGCTCTGGCCGTTA CTCCTCGGAGACCTC coxB1 2595827 - 2594880 - | cytochrome oxidase subunit II SRU_2101 2596682 - 2595939 - | hypothetical protein SRU_2102 2597957 - 2596818 - | molybdopterin oxidoreductase membrane subunit, putative TERM 1539 2597851 - 2597835 - G 79 -4.3 -4.8083 | opp_overlap 2597837, overlap 2597837 GAACACGAGGAAAAA GAGCCCC CCC AGGGCTG TGGTCAACAGAAACG SRU_2103 2598882 - 2598178 - | hypothetical protein TERM 1540 2598652 - 2598673 + g 72 -13.7 -3.04144 | gap 1 CACCGTGCCCGAGAC CGGCGCCCGC ATG GCG-GCGCCG TCTTCAAAGTACGGA TERM 1541 2598906 - 2598856 - G 73 -12.6 -3.38966 | gap 1, opp_overlap 2598857 2598859 2598860 2598862 2598905, overlap 2598857 AAAATCGAGGGAGAA TGCGGACGGGACCGATCGATGCG GCATCA CGCATCGACCG-TCCCGTCATCT TTGACGAGCTCAAGG TERM 1542 2598857 - 2598905 + g 78 -13.9 -3.54424 | gap 1, opp_overlap 2598856 2598857, overlap 2598859 2598860 2598862 AAATCGAGGGAGAAT GCGGACGGGACCGATCGATGCG GCATCA CGCATCGACCG-TCCCGTCATC TTTGACGAGCTCAAG TERM 1543 2598905 - 2598857 - G 77 -16.1 -2.62656 | gap 1, opp_overlap 2598857 2598859 2598860 2598862, overlap 2598856 AAATCGAGGGAGAAT GCGGACGGGACCGATCGATGCG GCATCA CGCATCGACCG-TCCCGTCATC TTTGACGAGCTCAAG TERM 1544 2598859 - 2598903 + g 78 -15.1 -3.35046 | gap 1, opp_overlap 2598857 2598856, overlap 2598857 2598860 2598862 ATCGAGGGAGAATGC GGACGGGACCGATCGATGCG GCATCA CGCATCGACCG-TCCCGTCA TCTTTGACGAGCTCA TERM 1545 2598860 - 2598902 + g 87 -18.6 -2.60813 | gap 1, opp_overlap 2598857 2598856, overlap 2598859 2598857 2598862 TCGAGGGAGAATGCG GACGGGACCGATCGATGCG GCATCA CGCATCGACCG-TCCCGTC ATCTTTGACGAGCTC TERM 1546 2598862 - 2598900 + g 76 -15.4 -2.84325 | gap 1, opp_overlap 2598857 2598856, overlap 2598860 2598859 2598857 GAGGGAGAATGCGGA CGGGACCGATCGATGCG GCATCA CGCATCGACCG-TCCCG TCATCTTTGACGAGC SRU_2104 2599487 - 2598882 - | hypothetical protein SRU_2105 2600944 - 2599547 - | polysulfide reductase chain C TERM 1547 2599593 - 2599607 + g 71 -12.8 -3.26471 | TACGCCTCGGCCAGG GCCGGC TCC GCCGGC TTGATGTAGGGCTCG TERM 1548 2600330 - 2600357 + g 72 -5.5 -4.3534 | gap 1 CAGCACGAGCGGCGT GGCGAGGCCTGC GAGCA GCAGG-TACGCC TTTTCGTAGTTGCGC SRU_2106 2604539 - 2601117 - | molybdopterin oxidoreductase, iron-sulfur binding subunit TERM 1549 2603669 - 2603647 - G 72 -12 -3.61398 | CCCGTGGTGGAATAA CGGCTCTCCA CCG TGTAGAGCCG GCTCATGGTGTCCTC TERM 1550 2603927 - 2603901 - G 74 -12.3 -3.54424 | CTGCAGGTTCGGAAA GCGATCCGCCA TGCGC TGGCGCATCGC CTGTACGGTCGGGGA SRU_2107 2605306 - 2604653 - | hypothetical protein TERM 1551 2605244 - 2605223 - G 79 -2.1 -5.01811 | overlap 2605225 2605226 2605228 2605234 2605235 GTACCAAACCAAAAA CACCAGGAG AACG CCCCCGAGG ACCGAAGCCCCTAGG SRU_2108 2608809 - 2606443 - | TonB dependent receptor, putative TERM 1552 2607649 - 2607673 + g 74 -9.9 -3.76482 | CCCCGGAAAGTTCTC CGAGGCGTAGG TCA CCTTCCCCTCG TTGTTCATCGTGTGC msrB 2609519 - 2610076 + | methionine-R-sulfoxide reductase SRU_2110 2610510 - 2610106 - | hypothetical protein TERM 1553 2610574 - 2610590 + H 82 -5.7 -4.82901 | overlap 2610576 GGGCCATCCCCAACG CGCTGGC GGG GCCGGAG TTTTTCTGCGAGCCG TERM 1554 2610665 - 2610684 + H 81 -4.2 -5.09426 | overlap 2610671 GGGACGAAAGCGCTT GCGTTCGT CCGA ACGGACCC TTTTTTCGCATTCCC SRU_2111 2610801 - 2611940 + | phosphofructokinase subfamily protein TERM 1555 2612750 - 2612763 + GF 71 -8.1 -3.86015 | ACCTGGAGGCCCCGA TGCCG CTGT CGGCA TTTCTCGACCGCGTG SRU_2112 2611855 - 2613144 + | hypothetical protein SRU_2113 2613492 - 2614268 + | hypothetical protein TERM 1556 2614298 - 2614271 - T 93 -18.4 -3.31144 | opp_overlap 2614271 2614285 GCTCGACCTCTAGAA GCGCAGCCGCCC GCCG GGGCCGCTGCGC TTTTTTGCATGGGCC TERM 1557 2614271 - 2614298 + T 100 -18.4 -5.08824 | opp_overlap 2614271, overlap 2614285 GCTCGACCTCTAGAA GCGCAGCCGCCC GCCG GGGCCGCTGCGC TTTTTTGCATGGGCC TERM 1558 2614838 - 2614806 - T 71 -13.3 -3.02144 | opp_overlap 2614809, overlap 2614809 CGATCCGCCCGAACA CGAGCGGCAGTCCCG AGT CGGGGCTGCCGCTTT TTTGTGTGTCCCCGT TERM 1559 2614835 - 2614809 - T 87 -19.4 -2.73875 | opp_overlap 2614809, overlap 2614806 TCCGCCCGAACACGA GCGGCAGTCCCG AGT CGGGGCTGCCGC TTTTTTGTGTGTCCC TERM 1560 2614809 - 2614835 + T 100 -21.6 -5.4251 | opp_overlap 2614809 2614806 TCCGCCCGAACACGA GCGGCAGTCCCG AGT CGGGGCTGCCGC TTTTTTGTGTGTCCC TERM 1561 2614894 - 2614866 - T 89 -13.1 -4.1891 | opp_overlap 2614860, overlap 2614867 CGTCCCGAAGAGAAA TGGCGAGATGCCC AAA AGGCACCTCGCCG TCCACGTTGTCCGGC TERM 1562 2614893 - 2614867 - T 84 -16.6 -3.11024 | opp_overlap 2614860, overlap 2614866 GTCCCGAAGAGAAAT GGCGAGATGCCC AAA AGGCACCTCGCC GTCCACGTTGTCCGG SRU_2114 2615322 - 2614939 - | putative protein-export membrane protein SRU_2115 2616022 - 2615393 - | hydrolase, NUDIX family protein SRU_2116 2617491 - 2616772 - | hypothetical protein TERM 1563 2617600 - 2617635 + rH 71 -14.1 -2.52676 | gap 1 CCCGACGGAGAGTCC CAGGTGCACGCGTCCG TTGGC CGGACTC-TGCACCTG TGGGTTGAGGGCATA SRU_2117 2619390 - 2617579 - | OMP85 family outer membrane protein SRU_2118 2619389 - 2619793 + | hypothetical protein mutY 2619971 - 2621035 + | A/G-specific adenine glycosylase TERM 1564 2621386 - 2621362 - T 74 -14.9 -2.5294 | overlap 2621361 2621359 2621349 CAGGGCGGAGAAGAC GGCCCCGGCCG CTC CGGCCGACGCC CCGAGCACCGCCCCG SRU_2120 2622221 - 2621691 - | hypothetical protein TERM 1565 2621865 - 2621828 - G 70 -13.3 -3.05343 | CCCAGAGCTGCAACA GGGGCCCGCCCCAATCG AGCC CGAGCGGGACGAGCGCC CCCAAGAGCACGTAC groS 2622459 - 2622749 + | chaperonin, 10 kDa TERM 1566 2622800 - 2622750 - f 76 -12.5 -3.50853 | gap 2, overlap 2622751 2622753 GTCGTTGAAGGATAA CGACCCGGCCGT-C-CCCGCGGCGC CCG GCGCCGCGGCTGCACGACCGACTCC CACTCCCGAACGAAT TERM 1567 2622799 - 2622751 - f 81 -16 -2.70298 | gap 2, overlap 2622750 2622753 TCGTTGAAGGATAAC GACCCGGCCGT-C-CCCGCGGCGC CCG GCGCCGCGGCTGCACGACCGACTC CCACTCCCGAACGAA TERM 1568 2622797 - 2622753 - f 70 -12.8 -2.89447 | gap 2, overlap 2622751 2622750 GTTGAAGGATAACGA CCCGGCCGT-C-CCCGCGGCGC CCG GCGCCGCGGCTGCACGACCGAC TCCCACTCCCGAACG TERM 1569 2623309 - 2623336 + G 74 -12.8 -3.54424 | gap 1, opp_overlap 2623303 2623306, overlap 2623321 GGCCAACAACGACGA CGCGATTGGCGAT CTC ATCGCCGA-CGCG TTTGAGCGCGTCGGG groEL 2622845 - 2624527 + | chaperonin GroEL TERM 1570 2624585 - 2624616 + T 100 -18.8 -5.72622 | opp_overlap 2624585 AACCGAACACCAAAA GGCTGCTCCTTCCC GCTC GGGAGGGAGTAGCC TTTTTTATTTGTCGC TERM 1571 2624616 - 2624585 - T 100 -14.4 -4.44284 | opp_overlap 2624585 AACCGAACACCAAAA GGCTGCTCCTTCCC GCTC GGGAGGGAGTAGCC TTTTTTATTTGTCGC SRU_2123 2627437 - 2624687 - | acetyltransferase SRU_2124 2627720 - 2627920 + | hypothetical protein SRU_2125 2629552 - 2628029 - | hypothetical protein TERM 1572 2628173 - 2628190 + g 70 -11.3 -3.59979 | overlap 2628159 GGGCACCGCGTGCCC CAGCAGG AGGG CCTGCTG TTTCGCGTCGAGGGA TERM 1573 2628812 - 2628827 + g 70 -2.5 -4.57569 | GAGGGTCGTGAGCCA CCGGT CGCCGT ACTGG TTTTTGAGGAGGTAG TERM 1574 2630193 - 2630140 - R 70 -7.9 -3.97368 | gap 1, overlap 2630143 CGGCCAAGCCACAAA GAGCGCGCGTCTGTCGTCGGGGGGGC AGT GTTCCCCCAACGGC-GACTCTCGGTC CCCCTACGCGTCCTC SRU_2126 2631306 - 2630197 - | radical SAM protein TERM 1575 2632064 - 2632094 + G 71 -12.4 -3.31263 | GGTGCCGATGGAGCG GGCCGGGCTGTACG TGC CGGGCGGCACGGCC TTCTACCCGTCGAGT hisD 2631543 - 2633009 + | histidinol dehydrogenase TERM 1576 2633163 - 2633140 - f 75 -14.6 -2.78463 | gap 1 ACGTGCTCCAGCACA TCCGG-CCCGC CGT GCGGGACCGGA GCGAGTACATCGTGG hisC 2633151 - 2634215 + | histidinol-phosphate aminotransferase TERM 1577 2634758 - 2634707 - g 70 -13 -3.01924 | gap 1, overlap 2634748 CATCGTCGCCGAAGA CGAGTCGGACATCTCCTC-GCTCGC CGA GCAGGCCGAAGAGACGTCCCCCTCG GAGGAGGAAGAGGGC SRU_2129 2634366 - 2634899 + | hypothetical protein TERM 1578 2634925 - 2634961 + F 100 -12.4 -5.56673 | gap 2 CGGACCCTCGATCCT GGCGAAGCCCTGCGGG ACTCGTG CCCGC-G-GCTTCGCC TTTTTTATTGTCCGT SRU_2130 2634976 - 2636703 + | hypothetical protein deoD 2638271 - 2637483 - | purine nucleoside phosphorylase SRU_2132 2636765 - 2637610 + | HD domain-containing protein SRU_2133 2639687 - 2638446 - | domain of unknown function, putative TERM 1579 2639573 - 2639621 + g 81 -12.4 -3.8211 | gap 1, overlap 2639594 GGCCCCGGCGGGATG CCGTGGTCGTCCGGGCGTGGCGT GCCG GCGCCGTCTCCG-ACGACGACGG TTCTTCTGGGTCGGG recX 2640428 - 2639760 - | regulatory protein RecX SRU_2135 2641437 - 2640544 - | hypothetical protein SRU_2136 2644141 - 2641556 - | TonB-dependent receptor domain-containing protein SRU_2137 2645533 - 2644331 - | sigma factor regulatory protein FecR/PupR family TERM 1580 2644840 - 2644827 - G 73 -9.5 -3.98913 | opp_overlap 2644832, overlap 2644828 GTCACATCGAAATAA GCGCG GCCA CGCGC CAGCGTGACGCGTCG TERM 1581 2645082 - 2645114 + g 73 -11.1 -3.67792 | CCAGCCCCCTCCCTG CGAGCACGTCCGGGG CGC CGCGGGGCGCGCTCG TTTCGGTCCGTCTGC SRU_2138 2646226 - 2645672 - | putative RNA polymerase sigma factor SRU_2139 2646526 - 2646810 + | hypothetical protein TERM 1582 2646851 - 2646882 + TF 100 -14.5 -5.29782 | gap 1 CTCTGTGTTCAGCGA GGAGGTCGCGCCCG TTCGC CGGGT-CGACCTCC TTTTTTATCGGTGTC rlpA 2647566 - 2646943 - | rare lipoprotein A TERM 1583 2647621 - 2647605 - gH 74 -2.1 -4.8083 | overlap 2647607 GAACATTATCAAAAA CGGCCAC AGC GCGAGCG GCTCTCAGCAATACC SRU_2141 2647549 - 2647827 + | ISSru2, transposase insA TERM 1584 2649080 - 2649062 - g 72 -7.3 -4.2558 | CATCTTTCAGCAAAA CCCCGGC TTCGT GCCGGCG GACGGGCAGGGGCTC TERM 1585 2650893 - 2650874 - g 70 -10 -3.65522 | gap 1 GATGGACGCGAACAA CGGCG-AGG CGA CCTTCGCCG TGGAGGGCGTCGACG SRU_2143 2648544 - 2651048 + | cytochrome c biogenesis factor SRU_2144 2651240 - 2651674 + | bacterio-opsin linked product TERM 1586 2652099 - 2652138 + F 83 -12.1 -4.09963 | GGGATTGCCGTGACG GGACGCGTGCCGACCGT GCTTCG GCGTTCGGTGCGTGTCC TTCTTCTTATTGCGA ilvB 2652438 - 2654228 + | acetolactate synthase, large subunit, biosynthetic type SRU_2146 2654252 - 2654974 + | acetolactate synthase small subunit TERM 1587 2655389 - 2655419 + GF 76 -11 -3.7574 | opp_overlap 2655383, overlap 2655390 2655396 GCTTCAACATTCACT ACGACCGCATCGAG CCG CCCGAGGCGGTCGA TGTTTTCATGGTCGC TERM 1588 2655390 - 2655418 + GF 77 -14.5 -2.84962 | opp_overlap 2655383, overlap 2655389 2655396 CTTCAACATTCACTA CGACCGCATCGAG CCG CCCGAGGCGGTCG ATGTTTTCATGGTCG TERM 1589 2655396 - 2655421 + GF 100 -14.1 -4.30576 | gap 1, opp_overlap 2655383, overlap 2655390 2655389 CATTCACTACGACCG CATCGAGCCGCC CGA GGCGG-TCGATG TTTTCATGGTCGCGC ilvC 2655058 - 2656104 + | ketol-acid reductoisomerase TERM 1590 2656271 - 2656291 + GF 72 -6.7 -4.18018 | overlap 2656272 CTCCGCGTGCTGGAG GCGGTGGGC TCG GCCCACGGA TTTTCCGTGACGGCC TERM 1591 2657152 - 2657109 - gf 70 -10.4 -3.55801 | gap 3, overlap 2657099 ACGAAGTCGGCGAAA CAGCGGCCGC--CGACGCGGT CCGGC ACGGCGTCGACGCGGCC-CTG GACGCCGGCTTCCGC leuB 2656040 - 2657278 + | 3-isopropylmalate dehydrogenase TERM 1592 2657359 - 2657399 + F 72 -12.4 -3.35679 | ACCCTGCGCCTTATC GAGCGTCCGGACGCGACG ACCGA TGCGGCGTCCGGGCGCCC TTCTGACTCCCAAAC leuA 2657454 - 2659094 + | 2-isopropylmalate synthase leuC 2659227 - 2660645 + | isopropylmalate isomerase large subunit SRU_2151 2661135 - 2660653 - | hypothetical protein leuD 2661190 - 2661807 + | 3-isopropylmalate dehydratase, small subunit TERM 1593 2662326 - 2662314 - g 85 -7.7 -4.82901 | CGGCTGCGACAAAAA CATGC CGG GCATG ATGATGGCGGCGATC ilvD 2661829 - 2663667 + | dihydroxy-acid dehydratase SRU_2154 2663716 - 2665374 + | alpha-isopropylmalate/homocitrate synthase family transferase SRU_2155 2665913 - 2665377 - | hypothetical protein SRU_2156 2666231 - 2665953 - | hypothetical protein SRU_2157 2666312 - 2667235 + | thioredoxin SRU_2158 2667238 - 2667687 + | putative thioesterase SRU_2159 2668813 - 2667689 - | phosphotransferase enzyme family protein mtap 2669608 - 2668817 - | 5'-methylthioadenosine phosphorylase II TERM 1594 2668912 - 2668877 - G 89 -10.3 -4.56597 | GGCCGCCCGCAAAAA CGCCCGCACGACCCG TTCCTG CTCGTCGCGCGAGCG GTCGAGCGTGGCGGA SRU_2161 2672700 - 2669758 - | TonB-dependent receptor domain-containing protein TERM 1595 2669856 - 2669887 + g 86 -7.2 -4.87626 | overlap 2669857 CCTGGATCTGATTGC TCTGCGTGGCATTG TTGG CAAAGCCGCTCAGG TTTTTCGTGTTGAGC SRU_2162 2673667 - 2673062 - | hypothetical protein SRU_2163 2675867 - 2673945 - | ABC transporter ATP-binding protein TERM 1596 2675935 - 2675954 + r 72 -4.2 -4.57073 | overlap 2675932 TACGATTCGTCCGCC GGGCCC ACCGGATC GGGCTC TTTTTCGCGGGGGTC rnz 2676887 - 2675919 - | ribonuclease Z TERM 1597 2676123 - 2676080 - G 75 -13.9 -3.29144 | gap 3 TGAGGTGCCCCAGAA GCAGGC-GCG-TGGCC-CCCGC CTC GCGGGCGACCGTCGCCGCCTGC CGGGCCGTCGAGTGC SRU_2165 2678873 - 2677005 - | ABC transporter ATP-binding protein TERM 1598 2678262 - 2678232 - G 91 -9.7 -4.72272 | gap 1, overlap 2678235 GCGGGCCATGAAAAA CACCGCCACCGCCA GCAC CGGCAGCGGCG-TG AGCGCGTAGAGCGTG SRU_2166 2679753 - 2679061 - | Crp family transcriptional regulator SRU_2167 2682477 - 2679769 - | OMP85 family outer membrane protein TERM 1599 2682473 - 2682487 + g 74 -5.6 -4.46212 | GAGTCGAAGCGAGTG TGCACG GGA CGGGCA TTTTCTCATCACGCA SRU_2168 2683601 - 2682543 - | putative peptidase SRU_2169 2684876 - 2683899 - | HPr kinase/phosphorylase SRU_2170 2685978 - 2684983 - | ATPase fmt 2686947 - 2686024 - | methionyl-tRNA formyltransferase ftsY 2687996 - 2687022 - | signal recognition particle-docking protein FtsY TERM 1600 2687430 - 2687453 + g 77 -3 -4.90266 | gap 1, overlap 2687433 GATGGTGTCGTAGGC CACCGCCGCCG GGT CCGCGCC-GTG TTTTTGCTTGATGAG SRU_2173 2688643 - 2688041 - | putative phosphatidylglycerophosphate synthase SRU_2174 2689801 - 2688890 - | hypothetical protein SRU_2175 2692186 - 2689856 - | TonB dependent receptor domain-containing protein TERM 1601 2691375 - 2691362 - G 70 -2.3 -4.62069 | overlap 2691363 CGCCGAGGCCAAAAA CGGAC CGGT GCCCA CACTGCCCTGATACT TERM 1602 2693158 - 2693116 - R 85 -15.7 -3.53012 | gap 1, overlap 2693118 2693123 CTCCCGCTCCCCAAA CA-GAGAAGCCGACTGCCCC GATC GGGACAATCGGCTTCCCACG TGCAGAGGCCAGAGC TERM 1603 2693155 - 2693118 - R 95 -20.7 -3.34398 | overlap 2693116 2693123 CCCGCTCCCCAAACA GAGAAGCCGACTGCCCC GATC GGGACAATCGGCTTCCC ACGTGCAGAGGCCAG TERM 1604 2693150 - 2693123 - R 90 -15.6 -3.76232 | overlap 2693118 2693116 TCCCCAAACAGAGAA GCCGACTGCCCC GATC GGGACAATCGGC TTCCCACGTGCAGAG SRU_2176 2694422 - 2693199 - | fasciclin domain-containing protein TERM 1605 2694514 - 2694485 - R 73 -6.3 -4.37502 | opp_overlap 2694485, overlap 2694486 AGGACTACAGGAAAA TGCCCCTTCGGAC AGGA ATCCGGAGGGACG TGTGGTGGGCAGGGC SRU_2177 2696170 - 2694533 - | hypothetical protein SRU_2178 2699586 - 2696272 - | hypothetical protein TERM 1606 2696350 - 2696386 + g 72 -11.6 -3.51934 | gap 1, overlap 2696348 ACCCTGAACATTCCC GGCCCCGAGCGT-GACC GAAG GGTCGATGTTGGGGGCC TCTTTGTAGAGGAAC SRU_2179 2700444 - 2700112 - | 6-O-methylguanine DNA methyltransferase SRU_2180 2702675 - 2700480 - | hypothetical protein TERM 1607 2700831 - 2700858 + g 71 -12.8 -3.30124 | CGGCGTTTGGGGGGG GACGGTGTCGTA CGGG TACGGTACCGTC TTCTGAAGGATCGAG TERM 1608 2701302 - 2701290 - G 72 -4.7 -4.56597 | opp_overlap 2701290 TTCCCGGCCCAAAAA CCGTG CAA CGCGG TATTCGACCGGCAGA TERM 1609 2702908 - 2702866 - R 100 -16.6 -4.34402 | gap 1, opp_overlap 2702867 2702871, overlap 2702867 2702869 GTTTTCATATTAAAA GCAGATATGACCGCAGTTG TTAAAT CAACTGCGGTCACATCT-C TGCCTTGAAATACGC TERM 1610 2702867 - 2702908 + r 74 -14.6 -2.53876 | opp_overlap 2702866 2702867 2702869, overlap 2702871 TTTTCATATTAAAAG CAGATATGACCGCAGTTG TTAAAT CAACTGCGGTCACATCTC TGCCTTGAAATACGC TERM 1611 2702908 - 2702867 - R 86 -16.8 -3.2032 | opp_overlap 2702867 2702871, overlap 2702866 2702869 TTTTCATATTAAAAG CAGATATGACCGCAGTTG TTAAAT CAACTGCGGTCACATCTC TGCCTTGAAATACGC TERM 1612 2702906 - 2702869 - R 93 -19.4 -3.16202 | opp_overlap 2702867 2702871, overlap 2702866 2702867 TTCATATTAAAAGCA GATATGACCGCAGTTG TTAAAT CAACTGCGGTCACATC TCTGCCTTGAAATAC TERM 1613 2702871 - 2702904 + r 74 -14 -2.95091 | opp_overlap 2702869 2702866 2702867, overlap 2702867 CATATTAAAAGCAGA TATGACCGCAGTTG TTAAAT CAACTGCGGTCACA TCTCTGCCTTGAAAT SRU_2181 2705173 - 2703590 - | hypothetical protein TERM 1614 2705030 - 2705013 - G 73 -6.3 -4.3208 | GCGGACAAGCCAAAA GCCAGTA TCGC TACTGAC AATACCCCTATGAAG SRU_2182 2708286 - 2705221 - | hypothetical protein TERM 1615 2708375 - 2708338 - R 83 -9.2 -4.3255 | gap 3, overlap 2708339 GTCTCAAGCAAGAAA GCTGG-G-GC-GCAGGGCG TCT CGCCCTGCCGCACTCCAGG TGGCCGCTCAACGGA TERM 1616 2708374 - 2708339 - R 73 -12.7 -3.19048 | gap 3, overlap 2708338 TCTCAAGCAAGAAAG CTGG-G-GC-GCAGGGCG TCT CGCCCTGCCGCACTCCAG GTGGCCGCTCAACGG SRU_2183 2709212 - 2708826 - | putative 6-O-methylguanine DNA methyltransferase family protein TERM 1617 2709150 - 2709135 - G 74 -5.4 -4.56597 | GGCCCGCTCGAAAAA CGACTC GTCC GAATCG GAATGCGCCTGCATC murB 2709327 - 2710484 + | UDP-N-acetylenolpyruvoylglucosamine reductase SRU_2185 2710714 - 2711460 + | putative transposase TERM 1618 2711857 - 2711870 + F 74 -2.3 -4.85782 | overlap 2711854 2711859 TACATGCGCCGACGG GCGTA AGCC TCCGC TTTCTTTTTGGGCCC SRU_2186 2711913 - 2712167 + | hypothetical protein SRU_2187 2713551 - 2712574 - | ADP-ribosylglycohydrolase, putative TERM 1619 2714062 - 2714094 + G 72 -12 -3.53343 | gap 1, overlap 2714063 2714064 GGCGTCTTCCTGCTG CTG-CTCGGCGTCTC CGTC GGGACGCCGAGCCTG TTTGCGGGCACGCTT TERM 1620 2714063 - 2714092 + G 80 -15.7 -3.34398 | overlap 2714062 2714064 GCGTCTTCCTGCTGC TGCTCGGCGTCTC CGTC GGGACGCCGAGCC TGTTTGCGGGCACGC TERM 1621 2714064 - 2714091 + G 93 -19.2 -2.60496 | overlap 2714063 2714062 CGTCTTCCTGCTGCT GCTCGGCGTCTC CGTC GGGACGCCGAGC CTGTTTGCGGGCACG SRU_2188 2713624 - 2714373 + | heme exporter, protein B, putative SRU_2189 2714479 - 2715231 + | heme exporter protein C, putative SRU_2190 2715212 - 2715571 + | hypothetical protein SRU_2191 2715599 - 2716030 + | cytochrome c-type biogenesis protein CcmE, putative SRU_2192 2716041 - 2716478 + | hypothetical protein mgtE 2717941 - 2716523 - | magnesium transporter ksgA 2718902 - 2718012 - | dimethyladenosine transferase TERM 1622 2718803 - 2718775 - G 73 -5.9 -4.36914 | GGGTCGTGCAGAAAA TTTTGGCCGAGGC TCT GCTTCGGGCGAAA CGGAATGCTCATCTT SRU_2195 2720027 - 2718921 - | hypothetical protein SRU_2196 2721391 - 2720162 - | TPR repeat-containing protein SRU_2197 2722844 - 2721540 - | D-alanine--D-alanine ligase SRU_2198 2724209 - 2722917 - | amidohydrolase TERM 1623 2723960 - 2723983 + g 83 -8.8 -4.59944 | gap 1 ACCCGCCCGCGAGGG CCG-CGCGGCT GCC GGTCGCGACGG TTTCTTTGTGCTCGT TERM 1624 2724379 - 2724405 + H 100 -12.2 -4.8622 | ACAAGTTGAAGCTCT GTTGTCTGGGCC GTC GGCCCAGGCCGC TTTTTCGTTACCGCC gyrA 2724446 - 2727178 + | DNA gyrase, A subunit SRU_2200 2730023 - 2727228 - | fibronectin type III domain-containing protein SRU_2201 2730952 - 2730287 - | hypothetical protein TERM 1625 2731965 - 2731929 - g 78 -14.3 -3.53563 | overlap 2731930 2731957 ACACCGTTGCCCAAA GCGACGCCGCGGTTGGC CTC GCCAACGACGGCGACGG CGACCGCATCGGGAT TERM 1626 2731964 - 2731930 - g 85 -17.8 -2.71924 | overlap 2731929 2731957 CACCGTTGCCCAAAG CGACGCCGCGGTTGGC CTC GCCAACGACGGCGACG GCGACCGCATCGGGA SRU_2202 2731208 - 2732626 + | phospho-sugar mutase, putative TERM 1627 2732698 - 2732732 + F 91 -17.1 -3.30124 | opp_overlap 2732691, overlap 2732695 2732713 CACACACAGTCAGCA GGGGCGGCTTCCCTA CGGAC TTGGGGGGCCGCCCC TTGTGGGGCATCCAG SRU_2203 2732735 - 2734462 + | GDSL-like lipase/acylhydrolase domain-containing protein SRU_2204 2735929 - 2734502 - | NAD(P) transhydrogenase beta subunit SRU_2205 2736394 - 2736074 - | hypothetical protein SRU_2206 2737729 - 2736572 - | NAD(P) transhydrogenase subunit alpha TERM 1628 2737471 - 2737445 - G 74 -10.1 -3.86015 | opp_overlap 2737464 GAGCGGGCTGAGAAA CCCGACGAGGA CCTGC CCCTCGCCGAG CCGGTCCACCTCGTC serC 2738934 - 2737825 - | phosphoserine aminotransferase TERM 1629 2737941 - 2737966 + g 82 -16.2 -3.28712 | AGCGGTGCCCGGACA GGCCGAGCAG CCCCTC CTGCTCGGCC TTCTGGAGGAAGACC TERM 1630 2739238 - 2739208 - R 84 -15.5 -3.25823 | TGCCTCCCACAGCAA TGCCCCTGCACAG ATCGA CCATGCAGGGGCA CGGAAAATCCGAAAA SRU_2208 2739777 - 2739292 - | peptidyl-prolyl cis-trans isomerase, FKBP-type TERM 1631 2740284 - 2740300 + G 73 -13.7 -3.08464 | CGCCGCGTTTGAGGC GCTGCCC GAC GGGCAGC TTGAGTCCCTCCTGC TERM 1632 2740339 - 2740329 - g 72 -6.8 -4.18506 | GCAGCCCGAAAACAA GGAG CAG CTCC AGGCCATCCTGCGAT SRU_2209 2740042 - 2740581 + | osteoblast specific factor 2-related protein TERM 1633 2740608 - 2740630 + T 100 -16.3 -5.72622 | TTCTCTCGTCCCCAA GGGCGTGGC CGGGT GCCACGCCC TTTTTTGTTTGTCGG SRU_2210 2741636 - 2740668 - | hypothetical protein ndh 2742074 - 2743429 + | NADH dehydrogenase SRU_2212 2743511 - 2744032 + | hypothetical protein SRU_2213 2744792 - 2744259 - | hypothetical protein TERM 1634 2745453 - 2745478 + H 100 -16.9 -5.56264 | opp_overlap 2745453, overlap 2745437 2745435 2745434 CGCCTTCTCTGCAAA GGCGCTGGTTC TCAC GAGCCAGCGCC TTTTTTGTGTTTCCC TERM 1635 2745478 - 2745453 - H 83 -14.7 -3.53012 | opp_overlap 2745437 2745435 2745434 2745453 CGCCTTCTCTGCAAA GGCGCTGGTTC TCAC GAGCCAGCGCC TTTTTTGTGTTTCCC TERM 1636 2745960 - 2745997 + G 89 -10.6 -4.18018 | gap 2 GCGAGCTCGGCCTAA GCCGGGATGCCTCGACGG CCTA CC-TCGAGGCG-CGCGGC TTTTCGGTGCCGGAC argG 2745512 - 2746753 + | argininosuccinate synthase SRU_2215 2746807 - 2747940 + | hypothetical protein TERM 1637 2748760 - 2748741 - g 73 -13.6 -3.28712 | CGTGCGGCCCTACAA GGTGCTGG GCCA CCAGCACC GCCCCGAAATCCGGC argC 2748091 - 2749152 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1638 2749190 - 2749158 - f 95 -19.1 -3.50393 | opp_overlap 2749156 2749159 2749161, overlap 2749159 2749161 CTCCACTTGACAGAA CGACCGCGGACGGCC GAC GGCGGTCCGCGGTCT CATATCTCTTCCACC TERM 1639 2749159 - 2749189 + F 100 -22.6 -2.75975 | opp_overlap 2749159 2749158 2749161, overlap 2749156 2749161 TCCACTTGACAGAAC GACCGCGGACGGCC GAC GGCGGTCCGCGGTC TCATATCTCTTCCAC TERM 1640 2749189 - 2749159 - f 100 -22.6 -2.70022 | opp_overlap 2749156 2749159 2749161, overlap 2749158 2749161 TCCACTTGACAGAAC GACCGCGGACGGCC GAC GGCGGTCCGCGGTC TCATATCTCTTCCAC TERM 1641 2749161 - 2749187 + F 91 -19.4 -2.92255 | opp_overlap 2749159 2749158 2749161, overlap 2749159 2749156 CACTTGACAGAACGA CCGCGGACGGCC GAC GGCGGTCCGCGG TCTCATATCTCTTCC TERM 1642 2749187 - 2749161 - f 91 -19.4 -2.89298 | opp_overlap 2749161 2749159 2749156, overlap 2749159 2749158 CACTTGACAGAACGA CCGCGGACGGCC GAC GGCGGTCCGCGG TCTCATATCTCTTCC SRU_2217 2749223 - 2750410 + | aminotransferase SRU_2218 2750481 - 2751539 + | N-acetylornithine carbamoyltransferase argB 2751673 - 2752476 + | acetylglutamate kinase SRU_2220 2752611 - 2753696 + | M20A family peptidase TERM 1643 2753798 - 2753788 - g 72 -4.6 -4.56597 | overlap 2753791 CCTCTCTGGCAAAAA GACG CCA CGCC CGCGACCGACGACTG argH 2753764 - 2755077 + | argininosuccinate lyase SRU_2222 2755888 - 2755091 - | TerC family integral membrane protein TERM 1644 2755153 - 2755172 + g 95 -9.2 -5.02323 | GCCGGGGCCGGTGGA GGCGGACG GGCT CGTCCACC TTTTCTTTCTCATCA TERM 1645 2756006 - 2755979 - R 100 -13.4 -4.49337 | gap 1 GCAGAATGTAGAAAA GGGCGCCC-CCGC TTC GCAACGGGCGCCC CCTCGACGGAGCGGA SRU_2223 2756519 - 2756076 - | hypothetical protein SRU_2224 2756874 - 2757344 + | photoactive yellow protein SRU_2225 2760215 - 2757357 - | hypothetical protein TERM 1646 2760410 - 2760448 + H 73 -8.6 -4.03141 | overlap 2760411 TCGGTCGGCCTCAGT GGGACGCGAGGACCGCCT CTC AGGCAGGCCCCCCGTCCA TTCTTTCCTCGTGGT SRU_2226 2760833 - 2761084 + | hypothetical protein TERM 1647 2761152 - 2761182 + F 100 -19.1 -3.75153 | gap 1 ATACGCCCGTCCATC TGGCCGCTGTGGGG ACAA CCCC-CAGCGGCCA TTTGCATTCGGGCGG SRU_2227 2761234 - 2762010 + | hypothetical protein SRU_2228 2763052 - 2762042 - | SPFH domain-containing protein TERM 1648 2762501 - 2762534 + g 82 -5.9 -4.82667 | gap 1 CGTCATCTGCCGCTC CATCG-CCTGCTGCAC CGT GCGCGGCGTGTCGATG TTTTTGATCTCGTAG SRU_2229 2764014 - 2763100 - | SPFH domain-containing protein SRU_2230 2764653 - 2764057 - | nodulation efficiency protein D (NfeD) SRU_2231 2764638 - 2765597 + | YfiH SRU_2232 2765684 - 2766727 + | hydrolase, alpha/beta fold family protein recJ 2768530 - 2766776 - | single-stranded-DNA-specific exonuclease RecJ TERM 1649 2769072 - 2769086 + H 73 -8.5 -4.09685 | CTTCGATAACCCATC GGGCC CGAGC GGCCC TTTTGACCCGTGAGC rho 2769096 - 2770514 + | transcription termination factor Rho TERM 1650 2770721 - 2770735 + G 75 -7.1 -4.34402 | GCCGTGCACCCGGAC GGCGA CCGGA TCGCC TTTTCCTATCAAGGG TERM 1651 2771482 - 2771470 - g 70 -6.2 -4.1899 | overlap 2771471 CTACCTGATTGAAAA CGGC GGCGA GCCG CGCCCGCTGGACGTT TERM 1652 2773733 - 2773723 - g 77 -3.2 -4.89852 | overlap 2773725 2773726 CCAGACCGACAAAAA CATG GAG CACG GCCCCGCCCGGCCCG SRU_2235 2770568 - 2773846 + | MdsD protein, putative SRU_2236 2774011 - 2774757 + | HAD family hydrolase TERM 1653 2774796 - 2774825 + T 100 -19.3 -5.14563 | opp_overlap 2774794 AGGCCCGTACAGATG CGGCAGACCGGGG ATGT CCCGGGTCTGCCG TTTTTTGGTGCCCGG SRU_2237 2775486 - 2774860 - | OmpA domain-containing protein SRU_2238 2776481 - 2775561 - | hydrolase, NUDIX family protein SRU_2239 2776624 - 2778402 + | sulfate transporter SRU_2240 2779115 - 2778444 - | hypothetical protein SRU_2241 2779114 - 2779788 + | hypothetical protein SRU_2242 2780137 - 2779799 - | putative polyhydroxyalkanoic acid system protein SRU_2243 2780252 - 2782795 + | zinc-dependent carboxypeptidase domain-containing protein SRU_2244 2783231 - 2782893 - | AsnC family transcriptional regulator SRU_2245 2783283 - 2783585 + | GIY-YIG catalytic domain-containing protein pccB 2785283 - 2783598 - | putative propionyl-CoA carboxylase beta chain protein TERM 1654 2784223 - 2784182 - G 71 -12.2 -3.28712 | opp_overlap 2784182, overlap 2784184 2784213 2784214 GCTGGTTCGCCACAA TACCCACCGGCCGCCCGC CGATGC GCGAGAAGCCGGTGAGGA GGTTCTCACCGAAGT TERM 1655 2784221 - 2784184 - G 76 -14.8 -3.21276 | opp_overlap 2784182, overlap 2784182 2784213 2784214 TGGTTCGCCACAATA CCCACCGGCCGCCCGC CGATGC GCGAGAAGCCGGTGAG GAGGTTCTCACCGAA TERM 1656 2784287 - 2784258 - G 79 -7.2 -4.59773 | gap 1, opp_overlap 2784278 CTGGATCTCGAAAAA GTCGTCC-GCATC GACGA GATGCCGGATGAC GTCGCGCATGTCATA TERM 1657 2784782 - 2784792 + g 72 -8.2 -4.08692 | overlap 2784753 2784784 CGTTGAGGCCGATCA CGGG CGC CCCG TTTTCGAGCGCCTTC SRU_2247 2785583 - 2786587 + | hypothetical protein TERM 1658 2786615 - 2786673 + G 100 -26.9 -3.86897 | opp_overlap 2786617 2786621 2786629, overlap 2786629 TAGCGTCACGTATCA CACGAACCGGAAAAGGGACCGTCCGAC CACGT GTCGGGGGGTCCCTTTTCCTGCTCGTG TTTCTGCCCCGTACG TERM 1659 2786671 - 2786617 - g 100 -23.7 -2.80816 | opp_overlap 2786615 2786629, overlap 2786621 2786629 GCGTCACGTATCACA CGAACCGGAAAAGGGACCGTCCGAC CACGT GTCGGGGGGTCCCTTTTCCTGCTCG TGTTTCTGCCCCGTA TERM 1660 2786667 - 2786621 - g 100 -19.5 -3.29947 | opp_overlap 2786615 2786629, overlap 2786617 2786629 CACGTATCACACGAA CCGGAAAAGGGACCGTCCGAC CACGT GTCGGGGGGTCCCTTTTCCTG CTCGTGTTTCTGCCC TERM 1661 2786659 - 2786629 - g 91 -12.5 -4.21098 | opp_overlap 2786615 2786629, overlap 2786621 2786617 ACACGAACCGGAAAA GGGACCGTCCGAC CACGT GTCGGGGGGTCCC TTTTCCTGCTCGTGT TERM 1662 2786629 - 2786659 + G 100 -14.7 -4.32436 | opp_overlap 2786629 2786621 2786617, overlap 2786615 ACACGAACCGGAAAA GGGACCGTCCGAC CACGT GTCGGGGGGTCCC TTTTCCTGCTCGTGT TERM 1663 2787535 - 2787513 - g 78 -9.8 -4.10657 | overlap 2787524 CGAGAGTGTCGAAAA CCTCGGCAAC ATT GTCGCCCAGG GCGACATCGGGTCCA SRU_2248 2786587 - 2787990 + | osteoblast specific factor 2-related protein TERM 1664 2788071 - 2788110 + F 100 -21.5 -5.31275 | opp_overlap 2788046, overlap 2788067 AGCAACCCGTGGCCG CGCCGGATCTCCTCCCT CACCCA GGGGGGGAGGTCCGGCG TTTTTTATGATCGAC TERM 1665 2788371 - 2788398 + G 72 -14.8 -2.70932 | gap 1, overlap 2788375 CTGAGGATTCGACGC CCCGGCC-CGGCG CTG CGCCGCGGGCGGG TGCTTCGCCCCCGGA SRU_2249 2788334 - 2788984 + | RNA polymerase ECF-type sigma factor, putative SRU_2250 2789035 - 2790075 + | putative transmembrane sensor SRU_2251 2790121 - 2792934 + | TonB-dependent receptor domain-containing protein SRU_2252 2793118 - 2793630 + | hypothetical protein susB 2795843 - 2793717 - | alpha-glucosidase TERM 1666 2794409 - 2794439 + g 85 -5.4 -5.00616 | gap 1, overlap 2794412 CCATGACCGGCTCGT GCACGTCCAGCAC AATTTC GTGCTCGGCG-GC TTTTTTCACGACCCG TERM 1667 2794719 - 2794704 - G 72 -5.4 -4.4078 | CTCCGTGAACGAAAA GCTATC GCCG GACAGC CACGTCGACCAGCCT TERM 1668 2796206 - 2796185 - R 76 -9.3 -4.07618 | CCCCCAAGAAGTAAA GGCACGACG GACG CGACGCGCC GGTGATGGACGCTCT SRU_2254 2796853 - 2796458 - | hypothetical protein SRU_2255 2798754 - 2797093 - | glutamate dehydrogenase, short peptide TERM 1669 2799879 - 2799927 + G 80 -15.3 -3.29947 | CGTGCGCCCGCTCGC CGTCTTCGTCTCCTCCTTCGGGT CGA ACCTGGAGTGGGAGGAGAAGGCG TTCCTGTCGTGGCTG SRU_2256 2798824 - 2800881 + | monovalent cation:proton antiporter-2 (CPA2) family protein TERM 1670 2800870 - 2800856 - f 71 -9.2 -3.78775 | CGCCCGACGACGAAA CCGCCG ACG CGACGG AGACCGGCTGACGGC SRU_2257 2800999 - 2803446 + | Na-K-Cl cotransporter, putative TERM 1671 2803908 - 2803933 + G 86 -7.4 -4.91109 | overlap 2803909 CGCGCTCACCATCGG GGCCGGCACC ATGATC GGGGCCGGCA TTTTTCTCCTCGCCG TERM 1672 2803909 - 2803932 + G 70 -10.9 -3.54183 | overlap 2803908 GCGCTCACCATCGGG GCCGGCACC ATGATC GGGGCCGGC ATTTTTCTCCTCGCC cat1 2803852 - 2806194 + | cationic amino acid transporter SRU_2259 2806267 - 2808531 + | Na-K-Cl cotransporter, putative cat2 2808610 - 2809956 + | cationic amino acid transporter usp12 2809953 - 2810717 + | universal stress protein trkA1 2811474 - 2810812 - | Trk potassium uptake system protein TERM 1673 2811083 - 2811069 - G 75 -7.1 -4.3739 | CATCCCCGGACAAAA TGGCG TTGAC CGCCA GCAGCGCACTGGCCC cat3 2812864 - 2811503 - | cationic amino acid transporter TERM 1674 2812165 - 2812187 + g 75 -9.1 -4.14472 | opp_overlap 2812150, overlap 2812184 2812186 GGCTGATAAAGATCG CCTTCGGGA TGTTC TCCCGGGGG TTTTCGACCTCTTCG SRU_2264 2813092 - 2813805 + | hypothetical protein trkA2 2815581 - 2813947 - | Trk potassium uptake system protein trkA3 2816651 - 2815779 - | Trk potassium uptake system protein TERM 1675 2815811 - 2815821 + g 72 -6.8 -4.1899 | overlap 2815800 CCGTGGCGCTGGCCA GGTC GGC GACC TTTTCAATCGCCTCG TERM 1676 2816801 - 2816785 - g 74 -2.1 -4.8083 | overlap 2816787 GAACATTATCAAAAA CGGCCAC AGC GCGAGCG GCTCTCAGCAATACC SRU_2267 2816729 - 2817007 + | ISSru2, transposase insA trkH1 2818985 - 2817561 - | TrkH potassium uptake protein TERM 1677 2820476 - 2820420 - g 72 -5.6 -4.42386 | gap 1, overlap 2820423 GGGGCATCGAGAAAA TCACCTTCGTCGAGGGCGACCGCGGGG AGGT CGTCGAGGTGGCCCTC-ACGGCGGAGA GTCCCCTCGTGGGAC trkA 2819321 - 2820661 + | potassium transporter peripheral membrane component trkH2 2820658 - 2822157 + | TrkH potassium uptake protein TERM 1678 2823095 - 2823130 + G 78 -15.4 -3.11732 | gap 1, overlap 2823086 TCCTGGGCGGCCTCA TCGC-GGCGGCAGCCCG CTA CGTGCTGCCGCCGGCCA TTCAGTGGATTTCCC SRU_2272 2822503 - 2824131 + | potassium efflux system protein, putative SRU_2273 2824128 - 2825705 + | potassium-efflux system protein, putative TERM 1679 2826331 - 2826343 + G 83 -3.3 -5.14563 | CGACGTGGACCCGGT GCGCT TCG AGGGC TTTTTTGATGAGGGG cat4 2825819 - 2828029 + | cationic amino acid transporter cat5 2828198 - 2830333 + | cationic amino acid transporter TERM 1680 2830519 - 2830502 - f 74 -4.8 -4.59773 | CGCCACCGCCAAAAA GCCCTC GGCGGA GAAGGC AGGGAAACGTCCACT TERM 1681 2831741 - 2831776 + G 72 -6.8 -4.25104 | gap 1, opp_overlap 2831719 2831722, overlap 2831764 AGCGGCGGCTCCGCG TGCTGTCGGAGGTCGTG GAG CA-GGCCGACGACGGCA TTTTGGTAACGGCCC TERM 1682 2832602 - 2832569 - g 72 -13.7 -3.06492 | TCACCGAGCGCAAGA CGGCCGAGCGCGCCC TCCG GGACGAGCGCGACCG GTTCGAGAGCCTCTT SRU_2276 2830774 - 2834241 + | PAS domain-containing protein aroE 2834406 - 2835263 + | shikimate 5-dehydrogenase SRU_2278 2835396 - 2836034 + | hypothetical protein SRU_2279 2836079 - 2836465 + | hypothetical protein SRU_2280 2836946 - 2836524 - | redox protein SRU_2281 2837509 - 2837048 - | hypothetical protein SRU_2282 2838313 - 2837609 - | 20-beta-hydroxysteroid dehydrogenase TERM 1683 2837655 - 2837642 - G 74 -5.2 -4.56597 | TCGGTCGCGGAAAAA GCCC CCGCTC GGGC CGTCCTCGGGGAGCG TERM 1684 2837697 - 2837683 - G 77 -12.8 -3.64703 | GCGTCGCCAGCCAAA GGGCCG TGT CGGCCC CCTCCTCGGGCGTCC SRU_2283 2838600 - 2839082 + | CBS domain-containing protein SRU_2284 2840996 - 2839155 - | ABC transporter, ATP-binding protein TERM 1685 2840817 - 2840799 - G 74 -8 -4.17516 | overlap 2840802 CCCAAACCACAGAAA CAGCGTGC TGC GCCCGCCG GGGATCACCACGTCG SRU_2285 2842528 - 2841695 - | nitroreductase family protein TERM 1686 2841927 - 2841942 + g 72 -4.7 -4.44046 | ATGCCGGCCATCTGG TGGAC GTAGAG GTCCA TTTCTTTCGCCTGAA TERM 1687 2841986 - 2841959 - G 70 -11.2 -3.53012 | opp_overlap 2841969 2841970 2841976 TTCTTTCGCCTGAAA CGTAAGCGCGGC GGAG GCCGCCCCCACG TCGTGGGGCGCGCAC TERM 1688 2842015 - 2842029 + g 74 -5.7 -4.55295 | ACCGGTTTGGGCGGT CGTTC CCCGA GAACG TTTCTTTATAGAAGG SRU_2286 2843111 - 2842512 - | transcriptional regulator, TetR family protein TERM 1689 2844582 - 2844546 - g 82 -11.6 -4.11216 | gap 1 GGGCCAGGCCGAAAA CACCATCGCGGCCATCG AGGA CGACGGCTACGA-GGTG GAACGGGTCAACTAG ilvA 2843185 - 2844597 + | threonine dehydratase SRU_2288 2844943 - 2845227 + | hypothetical protein TERM 1690 2847132 - 2847105 - g 70 -9.8 -3.71917 | ACCTCAAACGGGAAA TCGTCGAGCGAA ACCA CCCGCTCGGCGA CGAGGACCTGCCGCC SRU_2289 2845247 - 2847598 + | putative helicase SRU_2290 2847602 - 2848471 + | hypothetical protein SRU_2291 2849804 - 2848488 - | MATE efflux family protein TERM 1691 2848815 - 2848800 - G 88 -7.5 -5.00616 | GTCGTCGGTAAAAAA GCCGG GCAGGA CCGGC CGCAGGGCCCAGAAC TERM 1692 2849296 - 2849270 - G 100 -14.5 -5.09762 | opp_overlap 2849286 AGTCGAAGACAAAAA TCAACAGCGGG TCGAG CCCGCCGTTGA CGACGTTGAAGCCGA drrA 2850392 - 2851102 + | response regulator DrrA TERM 1693 2851987 - 2851972 - g 75 -11.8 -3.66772 | overlap 2851963 GGAAACCGTCAAGAA CGGGCG CTAC CGCCCG CTCTCACGCCCGCTC pstS 2851205 - 2852272 + | phosphate ABC transporter, phosphate binding protein pstC 2852315 - 2853280 + | phosphate ABC transporter, permease protein PstC pstA 2853309 - 2854253 + | phosphate ABC transporter, permease protein PstA pstB 2854434 - 2855183 + | phosphate ABC transporter, ATP-binding protein TERM 1694 2855346 - 2855330 - g 73 -13.7 -3.18681 | CGCGAACGCGATGAA CGCCCTG CTT CAGGGCG ACGTGGACCTCGCGG phoU 2855229 - 2855966 + | phosphate transport system regulatory protein PhoU SRU_2298 2857653 - 2855983 - | hypothetical protein TERM 1695 2856553 - 2856535 - G 81 -14.6 -3.54424 | GCGCACCGCCGTAAA GCCGGTCA GGG TGACCGGC AGGGCCGTCGAGGCG TERM 1696 2857737 - 2857707 - R 100 -23.4 -4.07618 | opp_overlap 2857701 2857702 CCCCCAAGAACCAAA GGGGTCCGAGGAGC AGA GCTCCTCGAACCCC TCGGCCGTTTCAGGG SRU_2299 2864852 - 2857782 - | peptidase TERM 1697 2859074 - 2859090 + g 73 -12.3 -3.36749 | AGAAGACCTCCAGGT CGTCGAG ACT CTCGACG TTCATGTTCAGGGTG TERM 1698 2864923 - 2864967 + r 70 -11.9 -3.19255 | opp_overlap 2864951 2864954, overlap 2864909 GCGGCAGCTGTGGGC GCCCCGCGTCGGCCGTCCCTT CCA AAGACCAGCCCGGCGCGGGGC TTCAGTATGTGTTGG TERM 1699 2865689 - 2865661 - R 100 -10.1 -5.39721 | overlap 2865662 GCACGACACAAAAAA GCCCCACGGCGCC GGC GGCCCCGCAGGGA CAAAGAGGTGTGAAC TERM 1700 2865688 - 2865662 - R 86 -13.6 -3.82748 | overlap 2865661 CACGACACAAAAAAG CCCCACGGCGCC GGC GGCCCCGCAGGG ACAAAGAGGTGTGAA SRU_2301 2866743 - 2865826 - | 1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative TERM 1701 2867072 - 2867033 - H 100 -23.6 -4.09685 | opp_overlap 2867025 CTGCACGCGTGAAAA CCGTGCCGCCGAACGGCA GTCG TGACGCCCGGCGGCACGG CGATCGCCTGGTTGC ribD 2867408 - 2868529 + | riboflavin biosynthesis protein RibD ribE 2868590 - 2869243 + | riboflavin synthase subunit alpha SRU_2304 2870439 - 2869570 - | hypothetical protein TERM 1702 2869711 - 2869696 - G 78 -6 -4.60487 | overlap 2869698 CACGACCGGCAAAAA GGCCGC GACG GGGGCC CTCGCCGATCCCTCC SRU_2305 2871075 - 2870503 - | hypothetical protein TERM 1703 2872453 - 2872428 - g 70 -10.4 -3.75024 | CCGCATGATCAACAA TGAGGCCCGC TTCCGC GCGGTCCTCA CGATGGACCATTAGG SRU_2306 2871448 - 2872467 + | zinc-binding dehydrogenase family oxidoreductase TERM 1704 2872501 - 2872536 + T 73 -13.3 -3.21218 | ACGCCACCGCATCGA CGCCCCGGACGAG-GGC CCTG GCCGCCCGTCCGGG-CG TTCCTACTCCGCGCT SRU_2307 2873763 - 2872540 - | major facilitator superfamily protein SRU_2308 2876440 - 2874839 - | alpha-amylase, putative SRU_2309 2877047 - 2876421 - | short chain dehydrogenase TERM 1705 2877605 - 2877633 + H 100 -18.2 -4.54727 | CTCTCTCGGGCACCG CCCCCTGGTTGC CGTTC GCAGCCAGGGGG TTTTCGTTTGGCCGG SRU_2312 2877738 - 2879075 + | amino acid permease family protein SRU_2313 2881814 - 2879106 - | ferric enterobactin receptor TERM 1706 2879152 - 2879139 - G 73 -5.9 -4.4078 | GCGGGCGAAGTAAAA GGCCC CATT GAGCC CTTGCTGCACCGGCG SRU_2314 2882121 - 2883068 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 1707 2883330 - 2883303 - gf 79 -8.2 -4.37092 | opp_overlap 2883323 ACTTCTGCTACAAAA CCCTCCGCGCCC ATTC GGCCCCGGCGGG CGTGCCCGACGACTT SRU_2315 2883011 - 2886265 + | DNA helicase II SRU_2316 2886338 - 2887165 + | hypothetical protein TERM 1708 2887209 - 2887182 - T 100 -20.6 -4.05788 | GCGTCCCAAACGAAA CGGGCCCACCCC GGAA GGGATGGGCCCG CGAGCATTCAATTCC ilvE 2888178 - 2887237 - | branched-chain amino acid aminotransferase TERM 1709 2887969 - 2887944 - G 78 -14.7 -3.29144 | CGATGGTGTCCACAA CGGCCTCGACG AGCT CGTCGAGGTCG AAGGGAATGTCCATC SRU_2318 2889080 - 2888253 - | glycosyl transferase, group 2 family protein TERM 1710 2888369 - 2888407 + g 75 -9.4 -4.07568 | overlap 2888372 TGGTCCAGAGGATCT TGGCGGACGCCTTCACGG TGC CCGAGAGGGTGCCCGTAA TTTTGGAGGGCCCGA TERM 1711 2888372 - 2888404 + g 72 -13.3 -3.08032 | overlap 2888369 TCCAGAGGATCTTGG CGGACGCCTTCACGG TGC CCGAGAGGGTGCCCG TAATTTTGGAGGGCC SRU_2319 2889593 - 2889084 - | diamine acetyltransferase 2 SRU_2320 2891219 - 2889645 - | magnesium chelatase subunit ChlI family protein TERM 1712 2890684 - 2890664 - G 75 -9.7 -4.11216 | CGTTGATGGCGAAAA TGCCGCG GTTGGTG CGCGGCA CGATGCCGAAGTGGA TERM 1713 2891392 - 2891446 + r 70 -12.8 -2.95539 | gap 3, opp_overlap 2891392, overlap 2891411 TCAGTGCGGGCGAAA GGGGCGACGGCCGCGCCGTGGCGTCGG GGCG CCGGGGCTGCCG-GCGGC-G-CGCCCC CTTTGCTTCCGATTA TERM 1714 2891411 - 2891447 + r 76 -10.6 -3.93369 | opp_overlap 2891392, overlap 2891392 CGACGGCCGCGCCGT GGCGTCGGGGCGCCGG GGCTG CCGGCGGCGCGCCCCC TTTGCTTCCGATTAC SRU_2321 2892115 - 2891459 - | hypothetical protein SRU_2322 2895026 - 2892573 - | DNA-binding response regulator/sensor histidine kinase, putative SRU_2323 2895113 - 2895682 + | hypothetical protein SRU_2324 2897135 - 2895747 - | hypothetical protein TERM 1715 2897510 - 2897474 - gH 71 -13 -3.01791 | gap 1 AGCGCCGCCCCAACA CCCA-GCCGGCCCCGTC TCCC GACGAGGCCGACCTCGG CACGATCCGGCTGGG TERM 1716 2898503 - 2898491 - gH 70 -6.3 -4.24342 | overlap 2898495 CTCGGGACCAAGAAA TTGAC GTC GTCAA CGAGGACGAACAGGA SRU_2325 2897095 - 2899605 + | TonB-dependent receptor domain-containing protein SRU_2326 2899813 - 2900922 + | two-component signal transduction histidine kinase SRU_2327 2900944 - 2901780 + | LytTr DNA-binding domain-containing protein SRU_2328 2903008 - 2901956 - | luciferase-like monooxygenase superfamily protein SRU_2329 2904003 - 2903056 - | glutathione synthase TERM 1717 2904066 - 2904045 - R 100 -10.1 -5.38497 | gap 1 AGGGAAACTAAAAAA GCCC-CCGGC CGA ACCGGTGGGC GGAGGCAGTAGTGCC SRU_2330 2905904 - 2904291 - | deoxyribodipyrimidine photolyase, putative hsp 2906156 - 2906590 + | heat shock protein, class I TERM 1718 2906680 - 2906714 + TF 83 -9 -4.32857 | overlap 2906681 2906682 TCGGGTGCGGCTCCG TCCCCCGGTCGGCCCC CTC GGTTCCGGCCGGGGCC TTTCTATTTGGCAGA TERM 1719 2906681 - 2906713 + TF 73 -12.5 -3.19232 | overlap 2906680 2906682 CGGGTGCGGCTCCGT CCCCCGGTCGGCCCC CTC GGTTCCGGCCGGGGC CTTTCTATTTGGCAG TERM 1720 2906682 - 2906712 + TF 79 -16 -2.51057 | overlap 2906681 2906680 GGGTGCGGCTCCGTC CCCCGGTCGGCCCC CTC GGTTCCGGCCGGGG CCTTTCTATTTGGCA SRU_2332 2907462 - 2906791 - | phosphatidylethanolamine N-methyltransferase TERM 1721 2907634 - 2907653 + Gr 78 -6.3 -4.57073 | overlap 2907636 TCGCCTCTGTCCTCG CCGGCCC CAGCGT GGGCCAG TTTTTCGCCGAGCTC TERM 1722 2907742 - 2907695 - gR 76 -8.2 -4.14392 | opp_overlap 2907716 2907738 2907738 GCTCAAGGTCGAAAA CCCCCGGACGGACGGCGACG TGACCCGC CGGTGGCGTGCGCCCGAGGG CGACGGCGACGGGCG TERM 1723 2907716 - 2907773 + Gr 70 -11.7 -3.14962 | gap 1, opp_overlap 2907695, overlap 2907738 2907738 GACGGACGGCGACGT GACCCGCCGGTGGCGTGCGCCCGAGGGC GAC GGCGACGGGCGCG-GCGACCGGTCGGCC TACTTTTGCTGCTGC SRU_2333 2907414 - 2908778 + | L-carnitine dehydratase glyS 2910342 - 2908804 - | glycyl-tRNA synthetase SRU_2335 2910448 - 2910726 + | ISSru3, transposase insA SRU_2336 2910690 - 2911166 + | ISSru3, transposase insB SRU_2337 2911556 - 2911170 - | hypothetical protein TERM 1724 2911623 - 2911610 - R 82 -3.1 -5.1417 | TGACAAAATGAAAAA TGACC CGTC AGTCA ATAACCCCGCGCTCC radC 2912318 - 2911617 - | DNA repair protein RadC SRU_2339 2912457 - 2912341 - | hypothetical protein SRU_2340 2913643 - 2912522 - | transcription termination factor Rho SRU_2341 2914325 - 2915101 + | alpha/beta fold family hydrolase TERM 1725 2915279 - 2915295 + G 91 -9.4 -4.72986 | overlap 2915275 TCGCCGGGTGGCGGG CCGGAC GCCGG GTCCGG TTTTTCCTCCACATC TERM 1726 2915563 - 2915535 - g 85 -6.5 -4.93296 | CGACCAGGAGAAAAA GCCCCTCGCGTTC ACG GACCGCATGGTGC GCCTCGCCATCCCCA SRU_2342 2915221 - 2916852 + | Mur ligase family protein SRU_2343 2917560 - 2916868 - | hypothetical protein TERM 1727 2917679 - 2917658 - R 86 -8.7 -4.6645 | gap 1, opp_overlap 2917653 2917658, overlap 2917660 TAGACACACAGAAAA CG-CGAGACG TAA CGTCCCGACG TGCTCTTTCACACCA SRU_2344 2918373 - 2917837 - | glyoxalase family protein TERM 1728 2918655 - 2918676 + r 71 -5.8 -4.39002 | CAGCGCTATTCTCCC TCGCCCTC CACGCT GATGGCGA TCTTTTTTGTTCATA SRU_2345 2919990 - 2918854 - | acetoin utilization protein acuC TERM 1729 2919596 - 2919583 - G 70 -5.9 -4.2349 | GTTGTACACGCAAAA CCCAG AGGC CCGGG CCCGGTGCGCGTGAT SRU_2346 2920260 - 2921465 + | serpin (serine proteinase inhibitor) SRU_2347 2921916 - 2921500 - | hypothetical protein accA 2922962 - 2921955 - | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 1730 2922890 - 2922927 + g 71 -12.7 -3.31144 | overlap 2922884 2922926 CCGCGTTGAGCTCCC GCATCTCGGTGAGCTTG TCCT CAAGCTCGACGAGGGGC TTCTCGAAGTCGAGC SRU_2350 2924490 - 2923948 - | oxidoreductase, putative dnaJ 2925797 - 2924631 - | chaperone protein DnaJ grpE 2926568 - 2925897 - | co-chaperone GrpE TERM 1731 2926639 - 2926602 - R 78 -15.5 -2.69977 | overlap 2926599 2926604 2926607 ACACGGGACAGACTA CACGAGCGGCCGCCGGC ATTC GCCAGCGACCGCTAACG GCGTTCGGGGCGCGC TERM 1732 2926637 - 2926604 - R 77 -14.5 -2.89177 | overlap 2926602 2926599 2926607 ACGGGACAGACTACA CGAGCGGCCGCCGGC ATTC GCCAGCGACCGCTAA CGGCGTTCGGGGCGC TERM 1733 2926634 - 2926607 - R 86 -18.4 -2.69406 | overlap 2926604 2926602 2926599 GGACAGACTACACGA GCGGCCGCCGGC ATTC GCCAGCGACCGC TAACGGCGTTCGGGG hrcA 2927880 - 2926678 - | heat-inducible transcription repressor HrcA TERM 1734 2928206 - 2928196 - g 79 -6.8 -4.60924 | overlap 2928186 CAAATGCCCGAAAAA CAGG CGA CCTG AGGTTCGTTCGAACC sppA 2927937 - 2930177 + | signal peptide peptidase SppA, 67K type TERM 1735 2930246 - 2930205 - T 83 -14.5 -3.53012 | opp_overlap 2930235 CGCGGCCTCCTCAAA CCGAGCGG-CGGCCGTCCT GCTACG AGG-CGGCGGCCCGCTCGG CGGGCACGAGGACCT gpmI 2931795 - 2930224 - | phosphoglyceromutase TERM 1736 2931164 - 2931221 + g 73 -14 -3.09516 | gap 1, overlap 2931168 AAGGCCGCCCCCGTC CCGTCCGTGAGGAGCCGGTAGGCCCGC TCGGT GCGGGCCCACC-GCTCGTCGCGGTCCA TTGCGTAGTAGCGCC TERM 1737 2931168 - 2931217 + g 100 -22.2 -2.55544 | gap 1, overlap 2931164 CCGCCCCCGTCCCGT CCGTGAGGAGCCGGTAGGCCCGC TCGGT GCGGGCCCACC-GCTCGTCGCGG TCCATTGCGTAGTAG nth 2932879 - 2931905 - | endonuclease III TERM 1738 2932252 - 2932271 + gH 70 -2 -4.60487 | overlap 2932254 CCTTGGGGATGACGC GCTTGAGC TGTT GCTCCACC TTTTTGGGCGTCGTG TERM 1739 2932920 - 2932959 + Gr 70 -10.4 -3.53811 | overlap 2932901 GTCGCGCTGCTGCTC GGCGGGGGGGCCGCCCCG CTTT CGGCCCAGCCGCCCCGGC TTTCGGCGGAGTCGG TERM 1740 2933759 - 2933795 + Gr 72 -7.2 -4.14541 | CGGCGACGCGCTGCT GCTCGCG-GCGGTCGGCG TTA CGG-GACTGCTCGCGTGC TTTCTCTGGTTCGTG SRU_2357 2932860 - 2934092 + | hypothetical protein SRU_2358 2934720 - 2934187 - | hypothetical protein TERM 1741 2934827 - 2934797 - R 100 -24.8 -5.26875 | CCTCCAATGAAAAAA GGCCCCTGCCCGGA GCA TCCGGACAGGGGCC TGCATGGACGCCCCC hsp 2935432 - 2934899 - | heat shock protein, class I TERM 1742 2935518 - 2935475 - R 84 -10.9 -4.20074 | overlap 2935477 AAACACACCCCAAAA CAGCCTGCCACTTCGACGG AGCGCA CGGACGAGGTGGCAGGCCA GACGCAGGGGCCCGC TERM 1743 2935516 - 2935477 - R 84 -13.5 -3.6878 | overlap 2935475 ACACACCCCAAAACA GCCTGCCACTTCGACGG AGCGCA CGGACGAGGTGGCAGGC CAGACGCAGGGGCCC TERM 1744 2935579 - 2935545 - R 84 -15.6 -3.33261 | opp_overlap 2935563 CCGCAATTGTGACAA CGGCTGCGGCGGCGGC TCT GCCACGGCGGCAACCG TCTCGGCTCCGGCCC fahA 2936935 - 2935646 - | fumarylacetoacetase TERM 1745 2936306 - 2936294 - G 75 -3.3 -4.72272 | CTCCCCCACGAAAAA GCCCG TTT CAAGC TCGAAGTCGAGCAGC SRU_2361 2938090 - 2937029 - | hypothetical protein TERM 1746 2938737 - 2938748 + G 72 -7.2 -4.17132 | opp_overlap 2938737 2938736 GACATCAAAAACCAG CGCG AACT CGCG TTTATTCAGGAGTTT TERM 1747 2939465 - 2939453 - g 73 -6.2 -4.323 | CGGAAACACCGAAAA GGCC ATGCA GGCC TACCGGCAGCAAATC SRU_2362 2938206 - 2939951 + | TPR repeat-containing protein TERM 1748 2939986 - 2940026 + F 85 -15.4 -3.53563 | gap 1, opp_overlap 2940011, overlap 2939991 CTCATCTTGGTTCGA C-GCTCGCCCCGGGCCTCT CACG AGAGGCCTGGGGCTTGCTG TTTGCGGGCCCCTCT TERM 1749 2939991 - 2940020 + F 100 -21.5 -3.45571 | opp_overlap 2940011, overlap 2939986 CTTGGTTCGACGCTC GCCCCGGGCCTCT CACG AGAGGCCTGGGGC TTGCTGTTTGCGGGC TERM 1750 2940070 - 2940086 + F 81 -2.1 -5.19879 | overlap 2940030 2940029 CTGAGGTCCCGTCCC GCCGAGT GGC ACACGTC TTTTTCTCTTTCGAA SRU_2363 2940075 - 2941313 + | Cys/Met metabolism PLP-dependent enzyme superfamily protein SRU_2364 2941837 - 2941331 - | hypothetical protein SRU_2365 2943413 - 2941881 - | putative long-chain-fatty-acid-CoA ligase SRU_2366 2943929 - 2943474 - | hypothetical protein pgm 2945600 - 2943954 - | phosphomannomutase TERM 1751 2944902 - 2944952 + gH 81 -15.3 -3.05596 | gap 1 GTTGCGGGAGCGGTA CCCGCCGAGGGCGGCGTGGGTTGC AGGG GCGGCCT-CTCCGGCCTCGGCGCG TTCAATGACGGCCTC SRU_2368 2945588 - 2946580 + | putative cytochrome aa3 oxidase assembly protein, putative CtaA cyoE 2946679 - 2947584 + | protoheme IX farnesyltransferase drrA 2947652 - 2948617 + | daunorubicin resistance ATP-binding protein SRU_2371 2948662 - 2949444 + | ABC transporter rnhB 2950084 - 2949482 - | ribonuclease HII TERM 1752 2951576 - 2951537 - g 81 -4.2 -5.00616 | gap 1, overlap 2951538 2951573 TGCTGGCCGAAAAAA TCCGCGCGCACGACGCC GAGGCGT GGC-TCGTGAACACGGG CATCACCGGCGGCCC pckA 2950300 - 2951892 + | phosphoenolpyruvate carboxykinase SRU_2374 2953378 - 2951933 - | phytoene dehydrogenase, putative ade 2955252 - 2953429 - | adenine deaminase SRU_2376 2955748 - 2955218 - | hypothetical protein thrC 2957330 - 2956014 - | threonine synthase TERM 1753 2957510 - 2957474 - R 100 -21 -3.61715 | opp_overlap 2957478, overlap 2957478 GACGGGTCCCAACAA GAAAGCGGCCGTTGCC ACGGG GGCAAGGGCCGCTTTC CCATCGCGTGCAATG TERM 1754 2957506 - 2957478 - R 100 -16 -4.44667 | opp_overlap 2957478, overlap 2957474 GGTCCCAACAAGAAA GCGGCCGTTGCC ACGGG GGCAAGGGCCGC TTTCCCATCGCGTGC TERM 1755 2957478 - 2957506 + r 91 -16 -3.60627 | opp_overlap 2957478 2957474 GGTCCCAACAAGAAA GCGGCCGTTGCC ACGGG GGCAAGGGCCGC TTTCCCATCGCGTGC TERM 1756 2957556 - 2957588 + r 85 -9.9 -4.29738 | gap 1, overlap 2957535 CCCTGTCGGCGAGCC CCCGACCGTCGCAG CTAGTT CTGCGA-GTTCGGG TTTTGCTGCATCTGC SRU_2378 2958061 - 2957570 - | hypothetical protein TERM 1757 2957788 - 2957800 + g 70 -2.6 -4.66609 | GGCGCTTCATCTCCC GCCG TGCGT TGGC TTTTTGCGTGGAGTC TERM 1758 2958179 - 2958200 + r 85 -10.1 -4.25283 | ATCAGAGTGTTTCGG GGGCCGGAA CGGG TTCCGACCC TTTTCCTGACCGCAT TERM 1759 2958344 - 2958305 - R 83 -15.9 -3.14344 | gap 1, opp_overlap 2958312, overlap 2958312 TAGGGGGCTCAGCAA CGCAAAAGCGGCCTCCAC CAACC GTGAAGGCCGCTTTCG-G AGGGTCGGGGCAGCC TERM 1760 2958312 - 2958338 + r 81 -13.7 -3.54424 | opp_overlap 2958305 2958312 CTCAGCAACGCAAAA GCGGCCTCCAC CAACC GTGAAGGCCGC TTTCGGAGGGTCGGG TERM 1761 2958338 - 2958312 - R 100 -15.9 -4.30014 | opp_overlap 2958312, overlap 2958305 CTCAGCAACGCAAAA GCGGCCTCCAC CAACC GTGAAGGCCGC TTTCGGAGGGTCGGG SRU_2380 2960533 - 2958635 - | AMP-binding enzyme, putative TERM 1762 2958977 - 2958989 + g 82 -4.8 -4.87626 | overlap 2958986 CCCCACCACGACGAT CTGG TTGAT CCAG TTTTTGGTCTTAAAC TERM 1763 2959723 - 2959733 + g 72 -6.8 -4.18018 | TGAGGGTCGGCTGCA CCTC CTG GAGG TTTTGGCTGACCGCC pyrD 2961720 - 2960620 - | dihydroorotate oxidase SRU_2382 2961747 - 2962649 + | PhzF family phenazine biosynthesis protein SRU_2383 2965860 - 2962663 - | hypothetical protein TERM 1764 2967266 - 2967281 + G 79 -4.7 -4.83615 | GGCGAAGGCCCTGGA GGTGT CCTGCA ACACC TTTTTCTACCAGGTA mrdA 2966166 - 2968106 + | penicillin-binding protein 2 rodA 2968103 - 2969365 + | rod shape-determining protein RodA TERM 1765 2969656 - 2969613 - T 95 -21.1 -3.32022 | gap 2 GGCCCCACACACGAA CGGCCGCAGGGGCCAGGCTCC CACC GG-GCCCGACCC-TGCGGCCG TCGCGCTTGCCGTAA amt 2971197 - 2969779 - | ammonium transporter uvrA 2974391 - 2971341 - | excinuclease ABC, A subunit SRU_2388 2975054 - 2974767 - | alkaline phosphatase like protein SRU_2389 2975530 - 2975081 - | hypothetical protein SRU_2390 2976645 - 2975527 - | hypothetical protein SRU_2391 2978659 - 2976692 - | Ig-like domain-containing protein SRU_2392 2980532 - 2978808 - | mercuric reductase TERM 1766 2980585 - 2980597 + H 84 -2.6 -5.38054 | overlap 2980573 GCGCAGCCCCTCGAC CGGG CGGTT CTCG TTTTTCTTTGTCCCG SRU_2393 2980688 - 2982430 + | sensor histidine kinase, pleC SRU_2394 2982441 - 2982668 + | sensor kinase protein rcsC TERM 1767 2983525 - 2983540 + F 70 -10.4 -3.6682 | GAGGGCCTGGTTCTG CGTGGC GGCG GCCACG TTTCGATCCATGGCG SRU_2395 2985809 - 2987086 + | IS605 family transposase TERM 1768 2987131 - 2987110 - f 76 -11.5 -3.79678 | opp_overlap 2987097, overlap 2987097 AAGCCCGCAGAAGAA TCTCCCGGC TTTA GCCGGGGGA GAAGTCAAAGAGGCG SRU_2396 2987750 - 2988490 + | hypothetical protein SRU_2397 2989156 - 2988629 - | hypothetical protein SRU_2398 2990361 - 2989270 - | iron(III) ABC transporter, ATP-binding protein SRU_2399 2991983 - 2990436 - | ABC transporter, permease protein SRU_2400 2993226 - 2992135 - | extracellular solute-binding protein, putative TERM 1769 2993396 - 2993444 + H 75 -3.8 -4.72497 | gap 2, overlap 2993397 TCGCCGTAGCCCCAC G-GATCC-GGCCCCGCAGGCCA CACATGA TTGCCTTCGCGGCCTGGGTCTC TTTTCTTCGTAGGTA TERM 1770 2993397 - 2993442 + H 70 -7.5 -3.97413 | gap 1, overlap 2993396 CGCCGTAGCCCCACG GATCC-GGCCCCGCAGGCCA CACATGA TTGCCTTCGCGGCCTGGGTC TCTTTTCTTCGTAGG SRU_2401 2993419 - 2995530 + | acylaminoacyl-peptidase SRU_2402 2996731 - 2995559 - | glycosyl transferase TERM 1771 2996438 - 2996425 - G 73 -3.7 -4.68593 | overlap 2996426 2996429 TCCAGTACTGAAAAA CCACG GCGT CGGGG GCCGCGTCCCGCAGG SRU_2403 2998069 - 2996888 - | aldo/keto reductase SRU_2404 2998701 - 2998066 - | hypothetical protein TERM 1772 2998693 - 2998654 - G 89 -15.1 -4.13767 | gap 1, opp_overlap 2998663, overlap 2998656 2998661 GGTGCGAGTGCAAAA CACGAAAGAGGGGCGAAC GCGAG GTCCGCCCCTCTT-CGGG CTGTCCATCCGTGAC TERM 1773 2998691 - 2998656 - G 88 -16.3 -3.6692 | gap 1, opp_overlap 2998663, overlap 2998654 2998661 TGCGAGTGCAAAACA CGAAAGAGGGGCGAAC GCGAG GTCCGCCCCTCTT-CG GGCTGTCCATCCGTG TERM 1774 2998687 - 2998661 - G 93 -15.9 -4.07678 | opp_overlap 2998663, overlap 2998656 2998654 GTGCAAAACACGAAA GAGGGGCGAAC GCGAG GTCCGCCCCTC TTCGGGCTGTCCATC katG 3000936 - 2998747 - | catalase/peroxidase HPI TERM 1775 3001351 - 3001324 - g 77 -15.5 -3.03124 | GCCCATCGTGGAAGA GGCCCGGGCGG TGCTCG CCGCCCGGGAC CGGCTTGCAACCACC oxyR 3001124 - 3002032 + | redox-sensitive transcriptional activator OxyR SRU_2407 3003004 - 3002042 - | glycosyl transferase, group 2 family protein gyrB 3005112 - 3003154 - | DNA gyrase, B subunit TERM 1776 3005148 - 3005158 + H 86 -4.6 -5.11937 | AAAGGGTGTGAAGGC GCTC GTG GGGC TTTTTTCGGCTTCTT SRU_2409 3005509 - 3007251 + | glycosy hydrolase family protein SRU_2410 3007791 - 3007273 - | hypothetical protein SRU_2411 3008632 - 3007925 - | acetoin utilization protein, putative TERM 1777 3008105 - 3008132 + g 77 -12.7 -3.68988 | GGTCTCCGGCAGCTC CGAGGCGACGG CCAGCA CCTTCGCCTCG TTCTGTTCGATGACG SRU_2412 3010008 - 3008725 - | GTPase TERM 1778 3010094 - 3010107 + r 72 -3.7 -4.56597 | opp_overlap 3010094 TCAGGGGTAAACAAC GCGGC GGAA GCGGC TTTTTCGAGGGAAGA SRU_2413 3012533 - 3010335 - | hypothetical protein TERM 1779 3011088 - 3011078 - G 70 -2.4 -4.57837 | overlap 3011066 AGACGCCCTCAAAAA GCGG ATG CTGC AGGTCCACCCGACCA TERM 1780 3011528 - 3011484 - G 72 -7 -4.18494 | CACGTGCAGTGAAAA GTGGTGCCGGTCGTCGAC CGGGAGGTC GTCGTCCTCCGTCACCAC CGCCCCGTCCAGCCA TERM 1781 3012571 - 3012541 - R 74 -14 -2.91264 | gap 1 CTCTTCACGTAGACA CGCCGGGCC-GCC TTCGAT GGCCGACCCGGCG CAAACACCCAGAGAC SRU_2414 3013541 - 3012621 - | beta-Ig-H3/fasciclin domain-containing protein TERM 1782 3013513 - 3013490 - G 81 -7.4 -4.6902 | gap 1, overlap 3013493 GGACAAGGGCAAAAA GACCGAGGCCG AGG CGGCCCCA-TC GGCGAAGGGACGTAG TERM 1783 3013588 - 3013627 + r 91 -20.6 -2.52464 | overlap 3013623 GGGTCGGGCCGGCGC GGCGACGGGGCCGGGGGG TAGG CCCCTCTGCCCCGCCGTC TCCGTTAGGAGAAGA bfeA 3016354 - 3013646 - | ferric enterobactin receptor SRU_2416 3017834 - 3017172 - | O-methyltransferase family protein SRU_2417 3018857 - 3018012 - | hypothetical protein TERM 1784 3019684 - 3019712 + GH 72 -4.3 -4.56775 | overlap 3019685 GGAGTACGACCTGGA GCTGACGGACGAC GAG GGCGCCCGGCAGG TTTTTCAGGACCAGT TERM 1785 3019864 - 3019885 + GH 77 -3.6 -4.77036 | overlap 3019863 3019864 GTTCGTGCTGCCGGA GACGGGCG AGGAGC CGGTCGTC TTTTTCGTGATCGAC SRU_2418 3018836 - 3020755 + | response regulator SRU_2419 3020879 - 3021370 + | P-loop hydrolase UPF0079 SRU_2420 3021498 - 3022805 + | dihydrofolate synthetase SRU_2421 3022802 - 3024073 + | arsenite-activated ATPase ArsA TERM 1786 3024405 - 3024427 + G 81 -5.4 -4.82901 | opp_overlap 3024394 3024396 3024393 AATTGACGGCGACAC GGTGCCGCCG GAG CGGGTGCATC TTTTTATGGGCGAGG SRU_2422 3024259 - 3025803 + | hydroxymethylglutaryl-coenzyme A reductase TERM 1787 3026807 - 3026786 - g 70 -10.9 -3.53091 | gap 1 AGGGCGGCGCCGAAA CGGCCC-TCA AGC TGACGGGCCG CCTCTGGCGCTCGGC SRU_2423 3025906 - 3027438 + | putative glucosyltransferase SRU_2424 3027699 - 3028436 + | hypothetical protein anmK 3028512 - 3029705 + | anhydro-N-acetylmuramic acid kinase thiL 3029854 - 3030936 + | thiamine-monophosphate kinase SRU_2427 3031312 - 3030941 - | sensor/response hybrid, putative SRU_2428 3034203 - 3031549 - | hypothetical protein atpD 3034413 - 3035915 + | F0F1 ATP synthase subunit beta atpC 3035993 - 3036442 + | ATP synthase F1, epsilon subunit TERM 1788 3036447 - 3036468 + F 88 -14.5 -3.71848 | opp_overlap 3036464, overlap 3036457 GACAGTCTTGACTTC TCCCCTCGA TGAA TCGAGGGGA TTCTTCCTCACGGAA TERM 1789 3036698 - 3036717 + F 89 -11.4 -4.3739 | AGAGAGTCCGTGTAT CTCCCGGA TAAA TCCGGGGG TTTTCTCAAAGAGTA TERM 1790 3036924 - 3036880 - f 78 -14.4 -3.05384 | overlap 3036922 TGCTCCCGCACGGAA CCGCCTCGTCCGCGA-CGGCTG CAG CAGCCGATCACCGA-GAGACGG CCGTCGGGTCGTGCG TERM 1791 3038292 - 3038311 + G 77 -16.4 -2.62184 | opp_overlap 3038278 ACTCTCCGCCGCCGT GCGCCGGG GCGA CCCGGCGC TGCTCTACCACGGCG SRU_2431 3036949 - 3039069 + | peptidyl-prolyl cis-trans isomerase domain-containing protein TERM 1792 3039082 - 3039072 - T 81 -6.8 -4.72497 | GACGGACGAATAAAA TCCC CTA GGGA CCTGACGTCCCCTCG SRU_2432 3039746 - 3039123 - | SoxW precursor, putative TERM 1793 3040361 - 3040334 - g 70 -13.4 -2.96656 | gap 1, overlap 3040325 3040323 3040331 GAGACAGCGAAAGGA GCCCTGCGCCGCG CCG CGCGGCAC-GAGC GGGACCGAATGCTGT TERM 1794 3040642 - 3040622 - g 74 -2.3 -4.75372 | opp_overlap 3040622, overlap 3040624 AGCACGCAGCAAAAA CCCGACGGC ACC GCCCACGCG TTCGTGGACGCGGGA SRU_2433 3039773 - 3040939 + | metal-activated pyridoxal enzyme SRU_2434 3041125 - 3042195 + | hypothetical protein SRU_2435 3042241 - 3042960 + | hypothetical protein SRU_2436 3042992 - 3044776 + | tRNA nucleotidyltransferase/poly(A) polymerase family protein glpA 3046187 - 3044904 - | anaerobic glycerol-3-phosphate dehydrogenase, subunit A SRU_2438 3046474 - 3047427 + | hypothetical protein TERM 1795 3047455 - 3047513 + G 100 -26.9 -3.87373 | opp_overlap 3047457 3047461 3047469, overlap 3047469 TAGCGTCACGTATCA CACGAACCGGAAAAGGGACCGTCCGAC CACGT GTCGGGGGGTCCCTTTTCCTGCTCGTG TTTCTGCCCCGTATG TERM 1796 3047511 - 3047457 - g 100 -23.7 -2.80816 | opp_overlap 3047455 3047469, overlap 3047461 3047469 GCGTCACGTATCACA CGAACCGGAAAAGGGACCGTCCGAC CACGT GTCGGGGGGTCCCTTTTCCTGCTCG TGTTTCTGCCCCGTA TERM 1797 3047507 - 3047461 - g 100 -19.5 -3.29947 | opp_overlap 3047455 3047469, overlap 3047457 3047469 CACGTATCACACGAA CCGGAAAAGGGACCGTCCGAC CACGT GTCGGGGGGTCCCTTTTCCTG CTCGTGTTTCTGCCC TERM 1798 3047499 - 3047469 - g 91 -12.5 -4.21098 | opp_overlap 3047455 3047469, overlap 3047461 3047457 ACACGAACCGGAAAA GGGACCGTCCGAC CACGT GTCGGGGGGTCCC TTTTCCTGCTCGTGT TERM 1799 3047469 - 3047499 + G 100 -14.7 -4.32436 | opp_overlap 3047469 3047461 3047457, overlap 3047455 ACACGAACCGGAAAA GGGACCGTCCGAC CACGT GTCGGGGGGTCCC TTTTCCTGCTCGTGT SRU_2439 3047408 - 3048097 + | CBS domain-containing protein SRU_2440 3049103 - 3048171 - | daunorubicin C-13 ketoreductase TERM 1800 3048448 - 3048429 - G 70 -10.6 -3.62096 | overlap 3048431 GCCCAGCATCTGAAA CAGGCCCG AGAG CGGGCCGG GCAGGAACCGTCCGA TERM 1801 3048446 - 3048431 - G 70 -11.8 -3.39018 | overlap 3048429 CCAGCATCTGAAACA GGCCCG AGAG CGGGCC GGGCAGGAACCGTCC SRU_2441 3050924 - 3049557 - | hypothetical protein SRU_2442 3052901 - 3050958 - | hypothetical protein TERM 1802 3052898 - 3052881 - G 71 -3.3 -4.66833 | gap 1, overlap 3052882 GCCGAACGCGAAAAA GCCG-CCC AGG GGGTCGGT CATGAGGGCGGCCAT TERM 1803 3053096 - 3053079 - R 83 -7.7 -4.62002 | gap 1 AGGAACTACAGAAAA GCGCGTCG CGA CGA-GCGC CTAGTCGCGGCTGAG SRU_2443 3053702 - 3053097 - | hypothetical protein TERM 1804 3053547 - 3053535 - G 74 -5.5 -4.57073 | overlap 3053539 3053540 3053542 GATGCTCTTGAAAAA GAACC CAG GGCTC AGGACGTCGCTCCGG SRU_2444 3055455 - 3053710 - | FAD binding domain-containing protein TERM 1805 3053964 - 3053950 - G 70 -11.4 -3.36273 | opp_overlap 3053900 CGTGGTGAACATGAA GCGCAG GTT CTGCGC CCGCTCGTAGCGGCG SRU_2445 3056467 - 3055667 - | putative phosphoesterase SRU_2446 3057064 - 3058059 + | hypothetical protein SRU_2447 3058085 - 3059035 + | hypothetical protein SRU_2448 3060528 - 3059074 - | amidohydrolase TERM 1806 3060076 - 3060097 + g 73 -3.5 -4.62783 | overlap 3060079 GTCGCCGCGCGCAAT GGCCCGCCG GACG CGGCGCATC TTTTTCGGCTGCATC TERM 1807 3060611 - 3060577 - R 91 -17.2 -3.34517 | opp_overlap 3060576, overlap 3060582 ACGTTCCCCCAAACA GCAAAGGCCCGCTCCA GAT CGGAGCGAGCCTCTAC GTCTGCTACCAAATG TERM 1808 3060606 - 3060582 - R 95 -15.7 -4.00532 | opp_overlap 3060576, overlap 3060577 CCCCCAAACAGCAAA GGCCCGCTCCA GAT CGGAGCGAGCC TCTACGTCTGCTACC SRU_2449 3060892 - 3060665 - | hypothetical protein SRU_2450 3062675 - 3061098 - | alkaline phosphatase, putative TERM 1809 3061662 - 3061688 + g 72 -13.6 -3.12351 | GCCGGTGTCGTCCTC GTGGGCCGCGTG GTC CACGCGTCCCCC TTCAATCTGAAGGAG SRU_2451 3063500 - 3062694 - | hypothetical protein proV 3064247 - 3063567 - | choline transporter TERM 1810 3064287 - 3064273 - R 71 -8.5 -3.83226 | opp_overlap 3064280, overlap 3064260 AATCAGCGAGAAGAA CGCCG AGCGG CGGCG CCGTGTCGTCTACGT SRU_2453 3064803 - 3064297 - | hypothetical protein crcB 3065245 - 3064844 - | crcB protein SRU_2455 3065333 - 3065611 + | ISSru3, transposase insA SRU_2456 3065575 - 3066051 + | ISSru3, transposase insB SRU_2457 3066245 - 3066081 - | hypothetical protein SRU_2458 3066655 - 3066242 - | low molecular weight phosphotyrosine protein phosphatase SRU_2459 3066985 - 3066689 - | hypothetical protein SRU_2460 3068095 - 3067025 - | hypothetical protein arsM 3069045 - 3068233 - | arsenite S-adenosylmethyltransferase TERM 1811 3068340 - 3068362 + g 70 -6.3 -4.18494 | gap 1 GGTGCTCGGCCAGCA GCTCATC-CG GCAG CGAGATGGGC TTTTCGGTGGCGATG TERM 1812 3068548 - 3068524 - G 89 -10.6 -4.23758 | opp_overlap 3068532 3068534 ATCGGACACCGAAAA CCGGCCGCCG GGCCG CAGCGCCCGG TGCATCTGGGCGAAC SRU_2462 3069389 - 3069051 - | ArsR family regulatory protein TERM 1813 3069488 - 3069514 + H 72 -2.1 -4.7254 | CGCCGCCGAGGGGGA CGGTGGGGAAC TGAAC GATCCACGCTG TTTTTCGTCGCGAGT TERM 1814 3069571 - 3069585 + G 70 -4.2 -4.51174 | GCCCAGCCATGCTTC CGCG CCCCATC CGCG TTTTGCTTCTCCTCG TERM 1815 3069767 - 3069779 + G 74 -10.5 -3.85698 | AACCCTGGAGCTGGC CGCGG GCG CCGCG TTTCTCGCGACCGGG TERM 1816 3070039 - 3070080 + G 77 -16.5 -2.71483 | gap 1, opp_overlap 3070020 3070019 CCCACGAGCTCACGT GGGGGGCCCGGCTCGACTGG TCT CCCCTCGA-CCGGGCCACCC TCATTGGGGAGGTGT SRU_2463 3069528 - 3070262 + | hypothetical protein SRU_2464 3070487 - 3071059 + | hypothetical protein SRU_2465 3071165 - 3071260 + | hypothetical protein SRU_2466 3071324 - 3072217 + | hypothetical protein TERM 1817 3072209 - 3072221 + T 80 -4.8 -4.93365 | overlap 3072198 3072197 ATTAGCGACTCGGAC GACG AGTAG CGTC TTTTTCCTTATCGGA SRU_2467 3073428 - 3072229 - | BNR repeat-containing protein TERM 1818 3072409 - 3072357 - G 100 -19.2 -3.06183 | GCGAGGCGGACGCAA GCGTGGCCATCGGGACGG-CGGGTCG GGA CGCCCCGTCCGTCGCTATGG-CACGC ACGCGAAGGGCGGGC SRU_2468 3073748 - 3073488 - | Ste20-like kinase Don3, putative SRU_2469 3074018 - 3073755 - | hypothetical protein SRU_2470 3074174 - 3074668 + | hypothetical protein SRU_2471 3074675 - 3074920 + | hypothetical protein TERM 1819 3074984 - 3074957 - f 89 -14.9 -3.84185 | CCCATCGAAATAGAA GAGGCCCCGCT GCGCAG AACGGGGCCTC GACGGCAATTCGGTG SRU_2473 3075217 - 3075972 + | ABC transporter, ATP-binding protein, putative SRU_2474 3075988 - 3077511 + | transmembrane protein SRU_2475 3077921 - 3077523 - | CHY zinc finger family protein SRU_2476 3079413 - 3077938 - | hypothetical protein SRU_2477 3080981 - 3079473 - | hypothetical protein SRU_2478 3082589 - 3081096 - | hypothetical protein TERM 1820 3081160 - 3081121 - G 89 -15 -4.08216 | gap 1 TCATTCGCCCGAAAA CCCGCCAGCATCGCGTGCC GGT GGGACGCAA-GCTGTCGGG CGAGTACCCCCGTGG SRU_2479 3083402 - 3082635 - | ABC transporter, ATP-binding protein SRU_2480 3084915 - 3083554 - | hypothetical protein SRU_2481 3086034 - 3085108 - | AbrB family transcriptional regulator SRU_2482 3086762 - 3086112 - | hypothetical protein SRU_2483 3087269 - 3086793 - | ISSru3, transposase insB SRU_2484 3087511 - 3087233 - | ISSru3, transposase insA TERM 1821 3087603 - 3087627 + H 74 -2.1 -4.87133 | gap 1, overlap 3087598 TTTTTCCAAGGGGAA CGGCACCGGA TTCGCC TCCG-TCCCG TTTTCTTTCGCCACT SRU_2485 3087668 - 3089173 + | carboxypeptidase TERM 1822 3089238 - 3089202 - T 83 -16.6 -2.87132 | overlap 3089205 3089207 TGCTCCTCCGACATA GCACAGCCCAGCAGAC GGAGG GCCTGCCGGGCTGTGG CCATTCGACGAAATG TERM 1823 3089235 - 3089205 - T 84 -16.9 -2.69151 | overlap 3089202 3089207 TCCTCCGACATAGCA CAGCCCAGCAGAC GGAGG GCCTGCCGGGCTG TGGCCATTCGACGAA TERM 1824 3089233 - 3089207 - T 74 -13.7 -2.88999 | overlap 3089205 3089202 CTCCGACATAGCACA GCCCAGCAGAC GGAGG GCCTGCCGGGC TGTGGCCATTCGACG SRU_2486 3090765 - 3089266 - | hypothetical protein SRU_2487 3092293 - 3090968 - | two-component sensor histidine kinase TERM 1825 3091094 - 3091128 + g 76 -14.8 -3.21395 | overlap 3091091 CTTGGCGATGGCGAG GCCGAGGCCGGCCCCG CCC CGGTCCCGGTCCCGGC TCTTGTCGACCCGGT drrA 3093333 - 3092596 - | response regulator DrrA SRU_2489 3093531 - 3094889 + | 3-deoxy-7-phosphoheptulonate synthase SRU_2490 3095987 - 3094917 - | endoglucanase, putative TERM 1826 3095562 - 3095601 + g 73 -3.5 -4.5774 | gap 1, overlap 3095586 CTCCTCCTCGTCCTC GG-CCCCGATGTCCACGA ACAGC TCGTGCACCTTGGGCACC TTTTCGTTCTTGGTG drrA 3096262 - 3096942 + | response regulator DrrA SRU_2492 3097711 - 3096971 - | PhoP3 response regulator SRU_2493 3099388 - 3097958 - | hypothetical protein trmU 3100766 - 3099615 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1827 3101331 - 3101317 - g 93 -9.2 -4.87291 | opp_overlap 3101318 TACTTCAACGAAAAA CCGCCG GCC CGGCAG GCCGTGGAGGTTGCC SRU_2495 3100999 - 3101397 + | endoribonuclease L-PSP, putative SRU_2496 3102001 - 3101414 - | hypothetical protein SRU_2497 3103339 - 3102053 - | N-acetylmuramoyl-L-alanine amidase-like protein SRU_2498 3104898 - 3103489 - | hypothetical protein TERM 1828 3104480 - 3104503 + g 74 -14.6 -3.06183 | gap 1 CGCCGGGCGCCGCGG CGTCCG-CGGC CGG GCCGTCGGACG TTCCGTCGCCCTGCC rpoE 3105512 - 3104895 - | ECF subfamily RNA polymerase sigma factor TERM 1829 3105033 - 3105065 + g 82 -12.7 -3.96148 | opp_overlap 3105031 GATCTCCCGAAAGGT GAGGTCCGTTTCCTG GCG CAGGAGCAGGACCTC TTTCTGCTCGGGGGC radA 3107021 - 3105642 - | DNA repair protein RadA TERM 1830 3106232 - 3106245 + g 70 -2.3 -4.59773 | CCCCAATCTCGTTGG CCGCT CCGA ACCGG TTTTTCACACTCCGG TERM 1831 3107138 - 3107165 + H 76 -13.4 -3.14026 | opp_overlap 3107154 AGATCCCTCCGTGCC CCCGACGTAGAG GAAC CTCCGCGTCGGG TTGGATGTGCATATG TERM 1832 3107792 - 3107809 + G 70 -2.6 -4.60487 | AGCGCCAGCGAGTTT CTGGAG GGCGCG CGCCAG TTTTTCAAGCTGCTC SRU_2501 3107258 - 3108010 + | hypothetical protein SRU_2502 3108077 - 3108847 + | ABC transporter, ATP-binding protein SRU_2503 3109019 - 3109837 + | mce related protein SRU_2504 3109886 - 3111094 + | hypothetical protein SRU_2506 3111158 - 3112567 + | hypothetical protein SRU_2505 3113094 - 3112564 - | hypothetical protein SRU_2507 3114795 - 3113332 - | hypothetical protein TERM 1833 3113755 - 3113722 - G 73 -11 -3.62384 | ACAACTCACAGACAA GGCCGGTCCCCA TTCCCCGCTC TGCGGACCGGCC CCACGCCGACCAGCA TERM 1834 3113909 - 3113928 + g 89 -10.6 -4.17048 | GGGCCGTGGTCCCTT CCGGGGAC GGTC GCCCCCGG TTCTTTTCCCCACCA TERM 1835 3114359 - 3114331 - G 80 -9.4 -4.27886 | opp_overlap 3114347, overlap 3114347 3114348 GCTCAAACACAGAAA GGGCCCGCCCTG AAAAG CGAGGCGGGACC GGCTCGTGGGGCTAT TERM 1836 3114453 - 3114464 + g 70 -3.6 -4.56597 | ACAGGCTCGTAGGAC GCGG TAAC TCGC TTTTTAGAGAACCAA TERM 1837 3114644 - 3114654 + g 79 -2.4 -5.09426 | opp_overlap 3114644, overlap 3114620 GTCCGGGCGGACGAA CGGC CTC GCCA TTTTTTGGGATTCGG SRU_2508 3114926 - 3115453 + | CBS domain-containing protein SRU_2509 3115896 - 3118775 + | two-component sensor histidine kinase SRU_2510 3120702 - 3119146 - | sensory rhodopsin transducer (methyl-accepting chemotaxis protein) TERM 1838 3120308 - 3120324 + g 70 -8.7 -3.90729 | overlap 3120294 3120307 CGGTCCACTTCTTCG GAGAGGG CCT CCTTCTC TTTCTCCCGCTTGTT SRU_2511 3121478 - 3120759 - | sensory rhodopsin (SRI) TERM 1839 3121520 - 3121553 + r 74 -5.4 -4.56597 | opp_overlap 3121536, overlap 3121521 AGAACGTTTGGGGCT CCCT-TCCGAGAGAGA AGCT TCTCTC-CGGAGAGCG TTTTTCAGCAAGGCA TERM 1840 3121886 - 3121901 + r 75 -3.2 -4.84492 | gap 1, overlap 3121886 3121887 ACTCATCCACCGACT C-GGTCG GAC CGGCCCG TTTTCTTCTCGTTCG SRU_2512 3124140 - 3121873 - | two component system histidine kinase TERM 1841 3124456 - 3124482 + H 74 -5.6 -4.42653 | opp_overlap 3124453, overlap 3124455 TTCTGTATTGAACCG CGCCCGCCCAGC ATT GCGCGGTGGCCG TTTTCTCCCTCCCGT SRU_2513 3124666 - 3126540 + | sensor/response regulator hybrid protein, putative TERM 1842 3126805 - 3126831 + G 73 -14.4 -3.15544 | opp_overlap 3126803 3126804, overlap 3126813 CACGAAGTTGAAAGC GTCGAGCAGGCG GTA CGCCTTCTCGGC TTCGTCGAGGTGACG SRU_2514 3126625 - 3127428 + | HD domain-containing protein SRU_2515 3128748 - 3127525 - | SPFH domain-containing protein SRU_2516 3130628 - 3128940 - | hypothetical protein SRU_2517 3130946 - 3131224 + | hypothetical protein SRU_2518 3131243 - 3131908 + | putative cytidine and deoxycytidylate deaminase SRU_2519 3133389 - 3132058 - | NifR3 family protein TERM 1843 3132533 - 3132492 - Gf 74 -4.9 -4.56597 | gap 1, overlap 3132493 3132496 TCGCGCGCTCAAAAA TCCACGGGTTGC-CGAGCGC CCC GCGCCCGAGCATCACGCCGT CGACGCCCGTCTCCT SRU_2520 3133388 - 3133675 + | hypothetical protein SRU_2521 3133770 - 3134468 + | hypothetical protein SRU_2522 3134386 - 3135843 + | RB13-6 antigen SRU_2523 3136526 - 3135870 - | ABC transporter, ATP-binding protein SRU_2524 3137761 - 3136580 - | hypothetical protein TERM 1844 3138365 - 3138324 - g 75 -13 -3.45366 | gap 1, overlap 3138325 TGCGGAACGAAGCAA CGCTCGACGCCGACCATCC GGTAT GGACGGACGGCGT-GAGCC GCCCCGACAAGCGTC TERM 1845 3138364 - 3138325 - g 77 -16.5 -2.66899 | gap 1, overlap 3138324 GCGGAACGAAGCAAC GCTCGACGCCGACCATCC GGTAT GGACGGACGGCGT-GAGC CGCCCCGACAAGCGT TERM 1846 3138576 - 3138554 - g 72 -4.7 -4.46854 | overlap 3138555 3138556 CGAGTCAAGAACAAA TTGGCCTCC TGGCT GGAGGCCCC TCCAGCATGAACCTC rfaY 3138041 - 3138586 + | RNA polymerase ECF-type sigma factor SRU_2526 3138583 - 3139188 + | hypothetical protein TERM 1847 3140201 - 3140154 - g 71 -12.6 -3.31144 | gap 1, overlap 3140155 CCCCGACCTCCACAA GCCGACCGACGAGGCCTCCGCCC CGC GGTCGAACTCCTCGTCGGA-GGC CGCCCCCGAAGCCAC SRU_2527 3139207 - 3140670 + | hypothetical protein SRU_2528 3141597 - 3140809 - | Tat pathway signal sequence domain-containing protein TERM 1848 3140936 - 3140926 - GT 74 -2.4 -4.74103 | overlap 3140927 CTTTGAACTGAAAAA CCCC GAG GCGG TCAGGTCGCGGAGGC TERM 1849 3141205 - 3141172 - GT 71 -8.1 -3.86015 | gap 1 GATGTGGTCGATAAA TTCCGGCA-CGCCCGC GTC GGTGGCACTGCCGGAA CGGTCGTCCGCCGGG SRU_2529 3143269 - 3141536 - | GMC oxidoreductase family protein TERM 1850 3142072 - 3142100 + gH 76 -8.7 -4.18494 | CCTTCTTCTTGGTTT CCTCGTCGCCGGG AAA CATGGCGTTGAGG TTTTGGATGCCGCTG SRU_2530 3143296 - 3145491 + | glucosamine-6-phosphate deaminase-like protein TERM 1851 3146155 - 3146123 - gf 73 -6.2 -4.30576 | opp_overlap 3146122 3146123, overlap 3146124 CGCCGAGCAGCAAAA GCGG-GCGGCAGACGG GCT CCGTC-GCCTCACCGA GTTTGCCGCCGAGCG TERM 1852 3146232 - 3146198 - gf 75 -14.3 -2.82623 | opp_overlap 3146183, overlap 3146195 GCTCGTCGAGAACCA CGGCG-GCCTCTCGTCC GAC GG-CGAGTGGCTCGCCG GCGTGATGAACGAGG SRU_2531 3145380 - 3146570 + | AP endonuclease TERM 1853 3147041 - 3147076 + G 75 -13.2 -3.44051 | overlap 3147041 CACCGCTCCGCCGCC GCCCTCGACGGCGAGA TGAA TCTCGTCGCCGGGGCC TTCTCCTCCTCGCCC SRU_2532 3147023 - 3148132 + | Gfo/Idh/MocA family oxidoreductase SRU_2533 3148345 - 3149013 + | secreted glycosyl hydrolase TERM 1854 3149100 - 3149080 - gf 75 -3.1 -4.84527 | CCGATACAGTAAAAA CGCCGACAC GAT GGACCGACG CACGTTTTTGAAAGG TERM 1855 3149327 - 3149269 - gf 77 -15.6 -2.55216 | overlap 3149248 3149266 GACGAGCGAGAACAT CGTCGCCATCTGCGACATCGACT--TCGAC CAC GTCGACCAGTCGCTG-CGC-GACGGCGACG GCAACGTGGCGGACG SRU_2534 3148952 - 3150043 + | oxidoreductase SRU_2535 3149644 - 3150501 + | hypothetical protein SRU_2536 3150548 - 3151552 + | AP endonuclease SRU_2537 3151898 - 3151587 - | ArsR family transcriptional regulator TERM 1856 3151814 - 3151863 + g 86 -16.9 -3.29471 | GCAGTGCGCTGAGCA GCCGGAGCCGTGCCGGTGCGCCG AGCA CGTCGAACCGGCGCGCCACGGGC TTAATGTCGTCGGGC SRU_2538 3154411 - 3151943 - | TonB-dependent receptor domain-containing protein TERM 1857 3153653 - 3153632 - G 88 -7.9 -5.00616 | gap 1, overlap 3153633 CTGCGTTCCAAAAAA CCGGCCGGGC TGC GCCCG-CCGC ATCCCGAACCCCCAC TERM 1858 3153652 - 3153633 - G 72 -11.4 -3.60048 | gap 1, overlap 3153632 TGCGTTCCAAAAAAC CGGCCGGGC TGC GCCCG-CCG CATCCCGAACCCCCA SRU_2539 3155114 - 3154608 - | hypothetical protein TERM 1859 3154775 - 3154727 - G 83 -16 -3.55071 | gap 2, overlap 3154730 GCACACGCGCCCAAA GCACGAGCC-CCGT-CAGGCCCGC CCC GCCGGCCAGCACGGCGGCTCCTGC AGGGCCCGCATCGAG TERM 1860 3154783 - 3154730 - G 71 -13.8 -2.90813 | overlap 3154727 CACGCGCCCAAAGCA CGAGCCCCGTCAGG-CCCGCCCCGCC GGCC AGCACGGCGGCTCCTG-CAGGGCCCG CATCGAGGACCCGCC SRU_2540 3156380 - 3155346 - | hypothetical protein proS 3158294 - 3156711 - | prolyl-tRNA synthetase TERM 1861 3158987 - 3159006 + G 70 -4.2 -4.52589 | gap 1, overlap 3158992 CGTACGTTTCCGTCC GGCCGCGGT ACT ACCG-GTCC TTTTATCTCGACCCA TERM 1862 3159198 - 3159164 - g 73 -14.3 -3.14132 | gap 2, overlap 3159176 GCCCGCGGGGAGGAA CCGTCGGACGAAGCGCC TCG GGCGC--CGACCGACGG GGCACGCGATCACGG SRU_2542 3158599 - 3159990 + | hypothetical protein TERM 1863 3160076 - 3160086 + G 75 -6.8 -4.35116 | ACACCCGATCTATGT CGAC GCG GTCG TTTTGCTCTCGGCTC TERM 1864 3160456 - 3160468 + G 75 -4.8 -4.62336 | opp_overlap 3160456, overlap 3160453 AACGTGGATACGGAA CGAG GATCG CTCG TTTTTGCGCTCGGCT SRU_2543 3160072 - 3161685 + | Outer membrane protein transport protein (OMPP1/FadL/TodX) SRU_2544 3162877 - 3161717 - | hypothetical protein TERM 1865 3162286 - 3162321 + g 71 -14.6 -2.62184 | opp_overlap 3162286, overlap 3162287 GCATGTACCCGAACA GCCGCGCGGGGGTGCT GTCG AGCGCCTCGGCGAGGC TCGTGTCGCGAAGGG gcp 3164075 - 3162879 - | O-sialoglycoprotein endopeptidase SRU_2546 3164074 - 3164583 + | hypothetical protein SRU_2547 3164671 - 3165138 + | hypothetical protein SRU_2548 3165199 - 3165666 + | hypothetical protein SRU_2549 3165696 - 3166067 + | hypothetical protein SRU_2550 3166463 - 3166104 - | hypothetical protein SRU_2552 3166684 - 3167046 + | hypothetical protein lipB 3167782 - 3167012 - | lipoate-protein ligase B SRU_2553 3175639 - 3167846 - | hypothetical protein TERM 1866 3170836 - 3170871 + g 70 -6 -4.21936 | gap 1, overlap 3170830 CCGGCGGGTTCTCCT CGGGGGGCGTC-GCGTG CCG CACGCCGACGACGATCG TTTTCACGTTCTGCA TERM 1867 3171319 - 3171344 + g 72 -5.3 -4.30576 | overlap 3171319 GCGCCAGCTGGTCCA CGTTGAGCAGG AGGG CCTGCTCGCGG TTTTGCTGCTGCACG TERM 1868 3173222 - 3173204 - G 70 -6 -4.18018 | GGCCCCGAGCGAAAA CTGGTC CCGCATC GACCAG TCGGCCCGCGCACCG TERM 1869 3173894 - 3173882 - G 75 -4.7 -4.59773 | opp_overlap 3173886 3173891, overlap 3173885 3173886 GCGGAGCTGCAAAAA CCAGG CGG CCGGG TTGACGGTCCCGTTC TERM 1870 3175073 - 3175100 + g 75 -14.2 -3.29461 | gap 1 GCGTCCGTCCCCCTG CTGGCGC-TGCTC GGT GAGCGTGCGCCAG TTCTCGCGCAGGTTG lys1 3177197 - 3175947 - | saccharopine dehydrogenase recR 3177929 - 3177216 - | recombination protein RecR TERM 1871 3177660 - 3177699 + g 71 -12.1 -3.28712 | opp_overlap 3177684 GATGGCGGTCAGGTC GCTCGACTCCTCCACGA CACAAA TCGTCGAGGCGTCGCGC TTGTCCGAGCCGCAG SRU_2556 3178561 - 3178025 - | hypothetical protein SRU_2557 3180725 - 3178539 - | DNA polymerase III, subunits gamma and tau, putative TERM 1872 3179162 - 3179208 + g 71 -14.2 -2.91144 | overlap 3179159 3179199 GCTCGTCCCCGTCGT CGGGGCCCTGCGCGTCGGCGTC TGG GGCCTCGTCGTTCGGGGCCTCG TCATTTGGGGCGTCG TERM 1873 3179398 - 3179456 + g 73 -14.3 -3.1789 | gap 1, overlap 3179399 3179455 TCGGGCCCGTAGCCG GGGCGGGGCTCGGCGGCCGCGTCGGGGG ACGC CTCTCGTC-CGGCCGCCCCGCCCGTCTC TGTGTTCTCAGACTT TERM 1874 3179399 - 3179454 + g 78 -15.3 -3.14745 | gap 2, overlap 3179398 CGGGCCCGTAGCCGG GGCGGGGCTCGGCGGCCGCGTCGGGGG ACGC CTCTCGTC-CGGCCGCCCCGCC-CGTC TCTGTGTTCTCAGAC SRU_2558 3181371 - 3180895 - | RDD family protein tdk 3182397 - 3181714 - | thymidine kinase TERM 1875 3182477 - 3182497 + r 71 -4.6 -4.52589 | gap 1 AAGGTAACCGCACGT CCGG-GAGG AAGT CCACACCGG TTTTGTATGGAAGCG SRU_2560 3183223 - 3182573 - | hypothetical protein SRU_2561 3184444 - 3183248 - | major facilitator superfamily permease TERM 1876 3184429 - 3184394 - G 100 -11.8 -4.57073 | gap 1, overlap 3184395 CATCGTTGCGAAAAA GGCCAGGGTACACGTCC CGA GGACG-GCCCCCTGGCG TGACCAAAGTGTCAC TERM 1877 3184428 - 3184395 - G 80 -15.3 -3.33922 | gap 1, overlap 3184394 ATCGTTGCGAAAAAG GCCAGGGTACACGTCC CGA GGACG-GCCCCCTGGC GTGACCAAAGTGTCA SRU_2562 3185110 - 3184514 - | hypothetical protein TERM 1878 3185265 - 3185283 + H 71 -8.9 -3.86194 | GTTTTTCGCTCGGAC CGATCGA CGTCA TCGATCG TTTATCACAGGCCTT TERM 1879 3186185 - 3186199 + G 74 -5.6 -4.57073 | CGCGACAACGACTCG CCGCTC CTC GACCGG TTTTTGGAGACGGTA SRU_2563 3185351 - 3186253 + | LysR family transcriptional regulator SRU_2564 3187241 - 3186435 - | hypothetical protein TERM 1880 3186635 - 3186615 - G 70 -11.1 -3.56092 | GCAGTACGTGGCAAA CCCGAGGAG CTT CTCCCCGAG CGGCCCGTCCGGAAT SRU_2565 3188117 - 3187368 - | batD protein, putative SRU_2566 3189951 - 3188152 - | hypothetical protein TERM 1881 3188479 - 3188443 - G 71 -12.2 -3.33162 | gap 1, opp_overlap 3188457 3188474 CACCGCATCGTAGAA GGCCGCGTCGTCCCCCG CTTG CAGGTGGCGACG-GGCC GCCTGAAGGCGGTTT TERM 1882 3188457 - 3188491 + g 100 -15.7 -4.73297 | opp_overlap 3188443, overlap 3188474 AGGCCGCGTCGTCCC CCGCTTGCAGGTGGC GACGG GCCGCCTGAAGGCGG TTTGTTTCTTCATTG TERM 1883 3188474 - 3188495 + g 77 -7.9 -4.3255 | opp_overlap 3188443, overlap 3188457 GCTTGCAGGTGGCGA CGGGCCGCC TGAA GGCGGTTTG TTTCTTCATTGGGGG SRU_2567 3190706 - 3190107 - | hypothetical protein SRU_2568 3191344 - 3190703 - | TPR repeat-containing protein SRU_2569 3192474 - 3191422 - | putative batB protein TERM 1884 3191814 - 3191866 + g 70 -11.2 -3.51924 | gap 2, overlap 3191815 CGGCGGTCAGGAGCG TCACCCCGGCCTCCTCCGCGCGCTGC CGG GCGGCGT-CG-AGGTCGCCGGCGTGG TTCTCTCCGTCCGAG SRU_2570 3193433 - 3192564 - | von Willebrand factor type A domain-containing protein SRU_2571 3194372 - 3193614 - | Sir2 family transcriptional regulator SRU_2572 3195480 - 3194464 - | hypothetical protein SRU_2573 3196634 - 3195519 - | hypothetical protein SRU_2574 3198726 - 3196564 - | sensor histidine kinase TERM 1885 3197305 - 3197331 + gH 74 -7.9 -4.2349 | CAGCATGGTCGACTT GAGCCGGCTGG CCTCT TCGGCCGCCTC TTTTGCGTCTCGAAG miaB 3198996 - 3200714 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 1886 3200982 - 3201005 + G 75 -4.5 -4.60487 | TCCATGGACAATCCC TTCGGCCCG TACTCC TGGGGCGAA TTTTTCCCGATGGTG SRU_2576 3200844 - 3201902 + | putative poly-gamma-glutamate biosynthesis enzyme SRU_2577 3201909 - 3202358 + | hypothetical protein SRU_2578 3202544 - 3203494 + | HD domain-containing protein SRU_2579 3203834 - 3204541 + | sensory rhodopsin (SRI) TERM 1887 3204517 - 3204567 + F 100 -13.1 -4.46233 | gap 1, opp_overlap 3204534 ACCCTCGACCGCCTC CGTCGCCCCGGCACACACGGCGTA GGCG TCCGGCGTGAG-GCCGGGCCGTCG TTTGTTTCCCCTTCC htr1 3204627 - 3206204 + | sensory rhodopsin I transducer (HTR-I) SRU_2581 3207107 - 3206361 - | RNA polymerase sigma-28 factor SRU_2582 3208283 - 3207513 - | putative flagellar biosynthesis protein, putative SRU_2583 3209666 - 3208317 - | hypothetical protein flhA 3211775 - 3209694 - | flagellar biosynthesis protein FlhA SRU_2585 3212954 - 3211893 - | flagellar biosynthetic protein flhB TERM 1888 3212791 - 3212771 - G 76 -2.4 -4.85599 | CCGACCGGAGAAAAA TGCGGGCC GCCAT GTCCTGCA GGGACTGAAACGCCG TERM 1889 3212841 - 3212826 - G 85 -10.4 -4.18018 | GCCCCCCACCGAAAA GACGGC CATC GCCGTC AGCAGGAGCCCCACG fliR 3213839 - 3213063 - | flagellar biosynthetic protein FliR TERM 1890 3213906 - 3213923 + r 71 -14.1 -2.52543 | GTCCGGCGGGGGCGT CCGGCGG CGGG CCGCCGG TCACTTCGACACGCT fliQ 3214193 - 3213924 - | flagellar biosynthetic protein FliQ fliP 3215087 - 3214248 - | flagellar biosynthesis protein FliP SRU_2589 3215761 - 3215099 - | hypothetical protein SRU_2590 3216547 - 3215795 - | flagellar motor switch FliN fliM 3217781 - 3216663 - | flagellar motor switch protein FliM TERM 1891 3217155 - 3217128 - G 79 -12 -3.88787 | gap 1 GCAGATGTTGATAAA CGACG-GCTCGTC GTA GACGCGCACGTCG AACGAGGCCACGAGC TERM 1892 3217622 - 3217659 + g 76 -6.1 -4.48987 | opp_overlap 3217623, overlap 3217623 TCTGCGTCTGCGAGA ACAGGCGCGGCCGCTTA AAAT TGTACGGTTGCGCCTGC TTTTCCTTCTCCGCC fliL 3218455 - 3217841 - | flagellar basal body-associated protein FliL TERM 1893 3217911 - 3217921 + gr 81 -2.4 -5.11033 | ATCCCGTTCGCCTCC TCGC GCA GCGC TTTTTTCAGGTTGTC TERM 1894 3218134 - 3218144 + gr 74 -2.4 -4.74103 | CCTCCAGCTTTGAGA GGGC GCC GACC TTTTTGGATTCCGCG TERM 1895 3218390 - 3218350 - GR 72 -11.8 -3.31144 | overlap 3218353 GCGCCAGGGCCAGAA GCAGGAGGAAGTGCCGCT TGATG AGCGGCTCCTCGTCCTCC GTCAGGGCCCCGTCG SRU_2593 3219117 - 3218392 - | chemotaxis protein motA 3220014 - 3219193 - | chemotaxis motA protein SRU_2595 3222174 - 3220141 - | methyl-accepting chemotaxis protein TERM 1896 3221376 - 3221416 + gr 100 -12.5 -4.82901 | overlap 3221377 CCTCCGCCTCGGTCT TGGCCGCCTTGACGTCTTG GAG CAGGGCGTCCAGTCGGTCG TTTTTCTGGGCCGCC TERM 1897 3221377 - 3221415 + gr 79 -13.8 -3.49419 | overlap 3221376 CTCCGCCTCGGTCTT GGCCGCCTTGACGTCTTG GAG CAGGGCGTCCAGTCGGTC GTTTTTCTGGGCCGC SRU_2596 3222827 - 3222147 - | hypothetical protein TERM 1898 3222845 - 3222814 - GR 100 -16.6 -4.64861 | opp_overlap 3222835 GGCGGGCAAAAGAAA TCCGGCGCACCCAT GATT ATCGGCGCGCCGGA GCGGACCTTAAGTGT SRU_2597 3224752 - 3222953 - | methyl-accepting chemotaxis transducer SRU_2598 3225629 - 3224955 - | hypothetical protein TERM 1899 3225347 - 3225357 + g 70 -2.4 -4.59773 | TCATCTTCTCCTGGT TGGC GGC GCCC TTTTTCCAGATGAGG SRU_2599 3228490 - 3225692 - | methyl-accepting chemotaxis protein TERM 1900 3225771 - 3225781 + g 77 -6.8 -4.57073 | overlap 3225765 CGATCAGCACCCGCA TCCC GGC GGGA TTTTTGGGCGCCGTC SRU_2600 3229297 - 3228614 - | soluble lytic murein transglycosylase precursor TERM 1901 3229391 - 3229409 + r 72 -11.6 -3.36327 | CCGCCACTACGGGCG GGCCGGGG CCC CCGCGGCC TTCTGCATCGCATCG SRU_2601 3230596 - 3229382 - | chemotaxis response regulator protein-glutamate methylesterase TERM 1902 3230112 - 3230122 + gr 75 -3.2 -4.72986 | overlap 3230103 GCGAGGGCTCGTACC TTGC CGA GCAG TTTTTCCTCGACGTC TERM 1903 3230368 - 3230378 + gr 71 -8.2 -3.88787 | overlap 3230374 3230376 GCGCCTTTTCGACCC CGGC CTC GCCG TTTGTGGCCGTGTCC cheA 3232169 - 3230529 - | chemotaxis histidine kinase TERM 1904 3232319 - 3232330 + r 78 -3.6 -5.03314 | TGTCGACGAGCTCTT CGTC CTCG GGCG TTTTTTCGAGCTGGA SRU_2603 3233551 - 3232517 - | hypothetical protein cheY 3233961 - 3233560 - | chemotaxis protein CheY cheR 3234878 - 3234000 - | chemotaxis protein methyltransferase cheW 3235496 - 3234924 - | purine-binding chemotaxis protein CheW SRU_2607 3236930 - 3235632 - | flagellar biosynthesis cell-distal portion of basal-body rod SRU_2608 3237489 - 3237088 - | flagellar operon protein TERM 1905 3237443 - 3237469 + g 83 -14.5 -3.68351 | gap 1 TGTTTGGGCGTCTGC CGGAGCGCGTCC GGCG GGACGCG-TCCG TTTCGCTGGTGGACC SRU_2609 3238320 - 3237538 - | basal-body rod modification protein FlgD SRU_2610 3238647 - 3238342 - | hypothetical protein SRU_2611 3240293 - 3238893 - | hypothetical protein TERM 1906 3239795 - 3239809 + g 70 -8.5 -3.90112 | TCCCCCCTTCCCCGC CGGCC TGACC GGCCG TTTGCTTGCCGGCCC TERM 1907 3240367 - 3240332 - R 73 -3 -4.7497 | gap 1, opp_overlap 3240339, overlap 3240333 CCGATTGAGGAAAAA GGTCAGCGGCC-GGGCG ACG CGCCCCGGCCTTCGTCT CTGTCGGTCTCCTGC TERM 1908 3240339 - 3240360 + r 77 -13.7 -3.35465 | gap 1, opp_overlap 3240333 3240332 AGGAAAAAGGTCAGC GGCC-GGGCG ACG CGCCCCGGCC TTCGTCTCTGTCGGT SRU_2612 3240933 - 3240334 - | kinesin-like protein K39, putative fliJ 3241586 - 3241032 - | flagellar export protein FliJ TERM 1909 3241413 - 3241425 + g 72 -6.9 -4.24948 | CTCGGCGTCGGCGAG GGCCT GGC GGGCC TTTTCGGTCTCGTGC TERM 1910 3241708 - 3241661 - R 71 -8.4 -3.83323 | gap 1 CGTACACAACTCAAA GTTCCTGCCAGCTCCTACTCG GGAATGT CGTCCAGGAGCTGGC-GGAGC TGGGTGGACGGGGCG fliI 3243003 - 3241675 - | flagellar protein export ATPase FliI TERM 1911 3242186 - 3242145 - G 73 -12.1 -3.39018 | gap 1, overlap 3242143 GCAGGAGTGCAAACA CGCTGGGCGGGTAGCCG-CG TCG CGTCGGCGGCTCGCCCACCG CCAGCCCAATCTCGC SRU_2615 3244002 - 3243043 - | hypothetical protein TERM 1912 3243688 - 3243709 + g 76 -15.1 -3.09655 | overlap 3243704 GTCCGGGTCGTCGTC CGCCCCGTC GGCC GGCGGGGCG TCTGTCTCTGTGTCG fliG 3245096 - 3244047 - | flagellar motor switch protein FliG TERM 1913 3245057 - 3245109 + g 89 -16.9 -3.53012 | CCTCCGGGTCGTCGG GGAGGGCGGTGCCCGGGGCCC CCTCCGGGCTC GGGCTCATGGCACCGCCCCCC TTTCCGCCCACCCCG fliF 3246836 - 3245238 - | flagellar M-ring protein FliF TERM 1914 3245267 - 3245295 + g 73 -3.7 -4.64676 | overlap 3245268 CCTCCACGAGCCAGG ACCGGATCAGATC GGC GGTCTGCTCGGGA TTTTCTTCGACCTGG fliE 3247243 - 3246923 - | flagellar hook-basal body complex protein (FliE) SRU_2619 3247643 - 3247323 - | hypothetical protein flgC 3248194 - 3247694 - | flagellar basal-body rod protein FlgC SRU_2621 3248654 - 3248241 - | flagella basal body rod protein SRU_2622 3248700 - 3249659 + | sensor protein, putative ntrC 3249711 - 3251285 + | nitrogen regulation protein NtrC SRU_2624 3251658 - 3251299 - | hypothetical protein SRU_2625 3252189 - 3251782 - | hypothetical protein SRU_2626 3253721 - 3252237 - | flagellar hook-associated protein 2 C-terminus TERM 1915 3253570 - 3253596 + g 95 -8.1 -5.22006 | gap 1, overlap 3253571 GATGAAAGCTTCCCG T-CCAGGTCGCT CACC AGCGACTTGGTA TTTTTCTTCTGCTGG TERM 1916 3253571 - 3253594 + g 91 -13.2 -4.2328 | overlap 3253570 ATGAAAGCTTCCCGT CCAGGTCGCT CACC AGCGACTTGG TATTTTTCTTCTGCT SRU_2627 3254215 - 3253775 - | flagellar protein FliS SRU_2628 3258831 - 3254500 - | sensory box sensor histidine kinase/response regulator TERM 1917 3256881 - 3256852 - G 78 -14.3 -3.53343 | overlap 3256854 AATGTCCTCGGGAAA CAGGTCGTGGAGC GTGC GCCCCACGACCTC GTCGGTCGAGAGCCC TERM 1918 3256879 - 3256854 - G 86 -16.9 -3.34398 | overlap 3256852 TGTCCTCGGGAAACA GGTCGTGGAGC GTGC GCCCCACGACC TCGTCGGTCGAGAGC TERM 1919 3257760 - 3257785 + g 70 -11.8 -3.36327 | GCAGGCGTCGCTGCC GCCGGAGCGC CTGCTC GCGCTCCTGC TTCTCGGTCACGTCC TERM 1920 3258813 - 3258791 - G 76 -6.3 -4.56914 | gap 1, overlap 3258792 3258794 3258796 TTAGGCAAACGAAAA TCACACCCGC CGGT GCGGGT-CGA ATGCCCCGGGTGCGT SRU_2629 3259780 - 3259286 - | hypothetical protein TERM 1921 3260051 - 3260019 - R 100 -19.2 -5.82036 | opp_overlap 3260018 3260012 3260019, overlap 3260020 ACAACAAATAAAAAA GCACAGCCTCCGGC GTTGG GCCGGAGGCTGTGG GCATTGGTGTTGATT TERM 1922 3260050 - 3260020 - R 100 -22.7 -4.05561 | opp_overlap 3260019 3260018 3260012, overlap 3260019 CAACAAATAAAAAAG CACAGCCTCCGGC GTTGG GCCGGAGGCTGTG GGCATTGGTGTTGAT SRU_2630 3261388 - 3260144 - | flagellin SRU_2631 3262749 - 3261487 - | phase 1 flagellin SRU_2632 3262718 - 3263896 + | aryl sulfotransferase SRU_2633 3263999 - 3264862 + | cytosolic phenol sulfotransferaseA1 SRU_2634 3264909 - 3265019 + | hypothetical protein SRU_2635 3266085 - 3265081 - | HDIG domain-containing protein flgL 3267117 - 3266158 - | flagellar hook-associated protein 3 flgK 3268960 - 3267158 - | flagellar hook-associated protein FlgK SRU_2638 3269519 - 3268977 - | hypothetical protein SRU_2639 3269844 - 3269503 - | hypothetical protein flgI 3271157 - 3270057 - | flagellar basal body P-ring protein flgH 3271925 - 3271278 - | flagellar L-ring protein FlgH TERM 1923 3271689 - 3271717 + g 70 -11.1 -3.57144 | gap 1 CCCGCTGCCGTTCAG GCTCG-ACGAGG AGTTGC CCTCGTACGAGC TTTCACGCTGGCCGG SRU_2642 3272701 - 3271973 - | hypothetical protein flgG 3273517 - 3272729 - | flagellar basal-body rod protein FlgG flgG 3274282 - 3273557 - | flagellar basal-body rod protein SRU_2645 3274248 - 3275339 + | hypothetical protein SRU_2646 3275846 - 3278743 + | TonB-dependent receptor domain-containing protein TERM 1924 3279366 - 3279336 - g 71 -12.4 -3.28924 | overlap 3279337 TACCCTTCTCGACAA TGCCCGGGCCGACT TCG AGGCGGCCCTGGCG AGCACGGCATCCGAC TERM 1925 3279365 - 3279337 - g 74 -15.9 -2.57211 | overlap 3279336 ACCCTTCTCGACAAT GCCCGGGCCGACT TCG AGGCGGCCCTGGC GAGCACGGCATCCGA SRU_2647 3278806 - 3280293 + | hypothetical protein TERM 1926 3280323 - 3280353 + F 89 -16.9 -3.15999 | GTTTCCCAGCACCGC CCCGTTTCTCCGC CGGCC GCGGGGGAACGGG TTCGGTGTATCACGG SRU_2648 3280381 - 3283245 + | deacylase/carboxypeptidase superfamily protein SRU_2649 3283249 - 3286062 + | prolyl oligopeptidase family protein, putative TERM 1927 3286637 - 3286615 - g 86 -9 -4.61231 | opp_overlap 3286615 CGAGATGCCGAAAAA CGCGCAGGTG CGC CTCCTTCGCG TGCTCGAGACGGGCC atoC 3286199 - 3287680 + | response regulatory protein TERM 1928 3288261 - 3288236 - g 81 -14.7 -3.50853 | CGCCGCCAACTACAA CCCCGTCGAGG CGGG CCTCGATGGGG AGCGGCAGGCCGCCC SRU_2651 3287853 - 3288335 + | hypothetical protein aspG 3289275 - 3288340 - | asparaginase TERM 1929 3288570 - 3288549 - G 70 -11.6 -3.44487 | overlap 3288547 GACGACAGGCAAACA GACACGCC TCCTCG GGCGTGTC GCCGTCCCGCATCCG TERM 1930 3289345 - 3289372 + r 72 -14 -2.71144 | opp_overlap 3289312 GGCCTGGGGCAGGGC GGCCGCCCCCGC GCCG GCGAGGGCCGCC TGCTTCAGAAAGGTG TERM 1931 3289520 - 3289499 - R 100 -12.9 -4.67038 | CGCTGAAAAGCAAAA CCGTCCGCC CCGC GGCGGCCGG GGCCCCTCAGTACAT SRU_2653 3290807 - 3289527 - | 3-beta hydroxysteroid dehydrogenase/isomerase family protein TERM 1932 3290803 - 3290829 + g 70 -3.8 -4.55887 | TGGAACCAGCACAGC CTCATTGTGT GCAAATG ACACAATAAG TTTATGTTTTTGAAC SRU_2654 3290879 - 3291322 + | hypothetical protein SRU_2655 3291377 - 3291871 + | hypothetical protein purL 3292053 - 3294317 + | phosphoribosylformylglycinamidine synthase II TERM 1933 3294876 - 3294842 - g 70 -9.8 -3.71873 | GGATGGAGAGGCAAA GGAGCAGGTCGTCGGC GCC GCCGGCAAGCAGCCCC TGAAGGAAAACCTGG trx 3294573 - 3294917 + | thioredoxin trxB 3295089 - 3296207 + | thioredoxin-disulfide reductase SRU_2659 3296230 - 3296826 + | N-acetylmuramoyl-L-alanine amidase TERM 1934 3297098 - 3297114 + G 72 -5.1 -4.35926 | opp_overlap 3297092, overlap 3297093 3297088 GCTCAGAGACGCCCC CGGAG GGGTGGG CTCCG TTTTCGCTTTGCGCT TERM 1935 3297404 - 3297432 + G 71 -12.4 -3.28712 | gap 1, opp_overlap 3297383 CAGCGCCGTCGACGC GGCC-ATCGCCGC CAAC GCGGCGCTCGGCC TTATGGAGCCGACCG ggt 3296955 - 3298988 + | gamma-glutamyltransferase SRU_2661 3299420 - 3299070 - | hypothetical protein SRU_2662 3299992 - 3299504 - | hypothetical protein SRU_2663 3302199 - 3299989 - | TPR repeat-containing protein TERM 1936 3303106 - 3303134 + G 71 -12.4 -3.26433 | gap 1, overlap 3303125 CCCCGGGCCTGTCAC GCCCGCTCGTGGC CGTG GCCACG-GCGGCC TTGCTCGTGTCGTTC SRU_2664 3302298 - 3303203 + | CDP-alcohol phosphatidyltransferase SRU_2665 3303262 - 3305046 + | hypothetical protein SRU_2666 3306127 - 3305054 - | glycosyl transferase, group 1 family protein TERM 1937 3305245 - 3305200 - G 73 -13.1 -3.28712 | gap 1, opp_overlap 3305242, overlap 3305204 TCGGGTCGGTGAGAA GCGACCGCAGCGCGGCCCGGAG CGG CTGCGGGCCGTCCGGCGG-CAC GAGGGCGCCCACCGG TERM 1938 3305242 - 3305204 - G 74 -15.8 -2.59431 | overlap 3305200 GTCGGTGAGAAGCGA CCGCAGCGCGGCCCGGAG CGG CTGCGGGCCGTCCGGCGG CACGAGGGCGCCCAC SRU_2667 3306244 - 3307017 + | hypothetical protein TERM 1939 3307412 - 3307400 - g 75 -4.7 -4.64598 | GAAGGAGGTCAAAAA GTCCG TGA CGGGC AACGGCAACGCCTCC ruvC 3307074 - 3307613 + | Holliday junction resolvase SRU_2669 3307947 - 3307672 - | hypothetical protein SRU_2670 3308056 - 3308511 + | hypothetical protein TERM 1940 3308597 - 3308612 + F 74 -2.5 -4.86385 | overlap 3308598 CTCCCGTCCGGCGCC TCGTC AGTCTC GACGG TTTCTTTTTCCCCCT SRU_2671 3308685 - 3309635 + | ABC transporter, ATP-binding protein TERM 1941 3310256 - 3310267 + GF 80 -5.8 -4.67651 | CCATCGGCTACGTGA TGGC GTTC GCCA TTTATTTTGCCGTCT TERM 1942 3310371 - 3310326 - gf 72 -2.3 -4.67982 | opp_overlap 3310333, overlap 3310329 3310331 GGTCATCGAAGAAAA GAGCAGCCGGGTCGTCGAG GTCATCGT CTCGTCGGTCCGTCCGTTC GAGCTGCTGATGGGC SRU_2672 3309559 - 3310992 + | hypothetical protein TERM 1943 3311235 - 3311191 - f 71 -11.4 -3.51232 | gap 2, overlap 3311174 3311187 TTCCCCTTAAAGGAA CGAG-CGCCCG-CTCTCCGGAG CCC CTTCGGAACGCCGGGCGGCCCG CCCTCGCTCTCGCCC TERM 1944 3311480 - 3311444 - g 70 -8.6 -3.90048 | opp_overlap 3311444 3311456 GCCTCGTCAAAAAGA TGCACGGCGAGGCGAT CGGCT ACCGCGTGGCCGAGCA GTTTGTCCAGGAGGC tig 3311275 - 3312663 + | trigger factor SRU_2674 3312685 - 3313503 + | ATP-dependent Clp protease proteolytic subunit TERM 1945 3313537 - 3313564 + F 100 -19.2 -4.94972 | TGCGTTGCACGTCAC GGCGACGGTCCC GGCT GGGATCGTCGCC TTTTTCGTTGTGCTG TERM 1946 3313666 - 3313624 - f 100 -7.7 -5.4505 | GGCCCCAACAAAAAA GAGGCGCTGGCCTGG GGGGAGGGAGGAG GAAGGCCAGCGCCTC AAAAAGACGTCGTGA SRU_2676 3314064 - 3315092 + | peptidyl-prolyl cis-trans isomerase domain-containing protein SRU_2677 3315736 - 3315167 - | acetyltransferase TERM 1947 3315967 - 3315997 + GH 93 -11 -4.36914 | opp_overlap 3315947, overlap 3315968 CCAACCGTGCCGAAG CCGCGCGGCGCG CGGCGGA CGCGGCGCGCGA TTTTCTCGCGGACGA TERM 1948 3315968 - 3315996 + GH 80 -14.5 -3.21934 | opp_overlap 3315947, overlap 3315967 CAACCGTGCCGAAGC CGCGCGGCGCG CGGCGGA CGCGGCGCGCG ATTTTCTCGCGGACG SRU_2678 3315723 - 3316391 + | HD domain-containing protein SRU_2679 3316540 - 3317115 + | hypothetical protein TERM 1949 3317729 - 3317753 + G 73 -12.1 -3.46271 | CCTCACGTTCCTCCT GCCCGTCGTCC TGG GAACGATGGGC TTCTGGGTGTTTCTG SRU_2680 3317190 - 3318377 + | hypothetical protein SRU_2681 3318427 - 3319191 + | NAD-dependent epimerase/dehydratase family protein SRU_2682 3320045 - 3319239 - | 3-oxoadipate enol-lactone hydrolase SRU_2683 3320268 - 3320786 + | putative regulator for granule-associated proteins TERM 1950 3321192 - 3321176 - g 74 -2.2 -4.83615 | overlap 3321177 GACCTGGCAGAAAAA GTGGAC CACCT GTCCAG ACAGGTCGAGGAGCT SRU_2684 3320831 - 3321256 + | PhaF, putative TERM 1951 3321284 - 3321323 + F 89 -17.2 -3.11569 | gap 1, overlap 3321300 CCTGGCCTCGAATTT GCGCCTTCGGGGAC-GAGG GGC CCTCCGTCTCGGAGGGCGC CTTTTCCCTCGCTGA TERM 1952 3321300 - 3321324 + F 100 -17.1 -4.19817 | overlap 3321284 CGCCTTCGGGGACGA GGGGCCCTCCG TCT CGGAGGGCGCC TTTTCCCTCGCTGAG SRU_2685 3321353 - 3322735 + | patatin family phospholipase SRU_2686 3324572 - 3322743 - | ubiquinone biosynthesis protein, putative TERM 1953 3324752 - 3324723 - H 100 -21.5 -5.63517 | GCCCCAAATAAAAAA GGGACGCCGCTGC AGTT GCAACGGCGTCCC TATAGGGGAATCCTG TERM 1954 3326599 - 3326613 + H 76 -5.7 -4.56607 | TAGGCTTGCGGCGAA CACGT TTCCC ACGTG TTTTATCGTTACTCA TERM 1955 3330147 - 3330159 + H 74 -4.7 -4.62069 | opp_overlap 3330141 3330147, overlap 3330148 TCCGTCAAAGAACAT CGCCG CGT CGCCG TTTTTCCGGTGAACG TERM 1956 3330388 - 3330418 + H 75 -12.4 -3.55563 | overlap 3330389 GACTGCATCCCTCCG TGGAGGGCGTCGGC TGC GCCGTCGCCTCCCG TTTCGGGACTCGCAT TERM 1957 3330389 - 3330417 + H 72 -13.7 -2.73124 | overlap 3330388 ACTGCATCCCTCCGT GGAGGGCGTCGGC TGC GCCGTCGCCTCCC GTTTCGGGACTCGCA TERM 1958 3331076 - 3331059 - g 70 -2.6 -4.62069 | GCGGGAGGCCAAAAA CCGGGT CTCCTC ACTCGG CCTTGCCGTGGGTAC TERM 1959 3331358 - 3331370 + G 75 -6.9 -4.37886 | opp_overlap 3331345 AACCGTCCGACACAT CGTCG TCC CGGCG TTTTGTCCAACGTCA SRU_2692 3330613 - 3331506 + | PASTA domain-containing protein TERM 1960 3331599 - 3331621 + T 74 -13.4 -2.94322 | opp_overlap 3331585, overlap 3331596 3331585 ACGGGTTCTGCACTC GCCCGGTAGC GCC GCTACAGGGC TCGTTTGGGTCCCGT SRU_2693 3332317 - 3331691 - | pyrimidine operon regulatory protein TERM 1961 3332402 - 3332436 + r 73 -11.2 -3.57561 | CCGGCATGGCCGCGG CGGCACAGCCCACGAG CCC CTCGGGGGCCGAGACG TTTGGGCCGTTCGCG SRU_2694 3333982 - 3332750 - | hypothetical protein TERM 1962 3333997 - 3334023 + H 70 -7.2 -4.08872 | opp_overlap 3333992, overlap 3333993 TTTGCAACGATCGGG GTGCCCGTTGAG TCT TTCGACCGGCGC TTTCGTTCTGTATTT hemH 3334178 - 3335362 + | ferrochelatase SRU_2696 3336385 - 3335423 - | endonuclease/exonuclease/phosphatase family protein, putative TERM 1963 3335993 - 3335960 - G 84 -9.6 -4.56597 | gap 2, overlap 3335945 3335961 3335962 CGCGTCCCGGAAAAA CGGCTGCGGCGGACGC GGGA GCGTCCTCCGCA-C-G TGCCTCCGGACGGGG SRU_2698 3336517 - 3337113 + | hypothetical protein SRU_2697 3337766 - 3337083 - | OmpA family protein SRU_2699 3338710 - 3337805 - | hypothetical protein TERM 1964 3338324 - 3338285 - G 79 -4.8 -4.72272 | gap 1, overlap 3338286 3338287 GCTGGTCAGGAAAAA CGCCCCGGC-GGCACAGGC GAG GCCGATGCCCACCCGGAGG CCTGTGACCCGCTCG TERM 1965 3338404 - 3338389 - G 70 -11.8 -3.39784 | overlap 3338387 3338362 CGAGGCCGAAGAAGA GCCCCC GCAT GGGGGC CGGGTACGCCTCCAT SRU_2700 3340450 - 3338786 - | TPR repeat-containing protein TERM 1966 3340356 - 3340310 - GH 81 -12.1 -3.77831 | gap 1, overlap 3340312 GGAGGAACATCCAAA GAGAGCGCCTG-CACGGGACGG CCGG CCGTCGCGGGGCGGGCGCCCGC CGGGCACCGAATTGA TERM 1967 3340354 - 3340312 - GH 76 -13.3 -3.46872 | gap 1, overlap 3340310 AGGAACATCCAAAGA GAGCGCCTG-CACGGGACGG CCGG CCGTCGCGGGGCGGGCGCCC GCCGGGCACCGAATT tmk 3340394 - 3341059 + | thymidylate kinase SRU_2702 3341148 - 3341690 + | ferric uptake regulation protein SRU_2703 3342427 - 3341891 - | hypothetical protein SRU_2705 3342582 - 3343406 + | small-conductance mechanosensitive channel, putative SRU_2704 3343879 - 3343403 - | ISSru3, transposase insB SRU_2706 3344121 - 3343843 - | ISSru3, transposase insA SRU_2707 3344199 - 3344504 + | transmembrane protein SRU_2708 3345495 - 3344530 - | UDP-glucuronate decarboxylase TERM 1968 3345537 - 3345527 - R 71 -8.2 -3.95836 | opp_overlap 3345526 3345531 ACGTGGAAAAGAGAA CGCG GGG CGCG CGGTGCTTACGGCTG SRU_2709 3346932 - 3345544 - | nucleotide sugar dehydrogenase TERM 1969 3346705 - 3346693 - G 79 -3.3 -5.09426 | CGGAAGGGCAAAAAA CACGA TCT TCGAG CCCGCGATTCCCTCC TERM 1970 3347582 - 3347553 - R 100 -17.2 -4.60073 | opp_overlap 3347574, overlap 3347573 CACAGAAGCAGAAAA TGCCGACCGGCC TGGAAC GACCGGTCGGCA GAACGGCAGCGTGGG SRU_2710 3348257 - 3347607 - | hypothetical protein SRU_2711 3350647 - 3348338 - | thiol:disulfide interchange protein DsbD, putative TERM 1971 3351609 - 3351587 - H 71 -9 -3.72576 | overlap 3351547 3351590 GCTCCCTCCACGAAA GACGGGACGC GAG GCGCCCCTCC TCGGTGCTGCGGCCT SRU_2712 3351650 - 3351961 + | hypothetical protein TERM 1972 3354313 - 3354324 + G 77 -3.6 -4.7254 | overlap 3354310 3354309 GACGACACCATTCCG GCCT GGCA GGGC TTTTTCGTGGAGCGT SRU_2713 3352306 - 3355503 + | cadherin domain-containing protein SRU_2714 3357107 - 3355701 - | hypothetical protein SRU_2715 3358211 - 3357441 - | succinylglutamate desuccinylase/aspartoacylase family protein SRU_2716 3358559 - 3358239 - | antibiotic biosynthesis monooxygenase domain-containing protein SRU_2717 3360329 - 3358662 - | putative multidrug resistance protein NorM TERM 1973 3360151 - 3360126 - G 70 -2.5 -4.60797 | GGCGGACAGAGAAAA CGCTTGATTGA TCAC TCCATCCAACG CGGGGCCGGAACTGC TERM 1974 3360401 - 3360445 + H 71 -5.5 -4.36903 | opp_overlap 3360418, overlap 3360389 GGACGGGCATATTGT GCCCATACTGTGAACTACTGC GGC GCAGCGGGGCCCGGTATGCGC TTTGTATTTCGTAGA SRU_2718 3360447 - 3361415 + | hypothetical protein TERM 1975 3361446 - 3361491 + T 90 -8.4 -4.87665 | gap 3, opp_overlap 3361437 3361469, overlap 3361448 3361449 AGAGAACCGAGCCAA GCG--GCCTGGCCG-GATGGGGA CAA TGCCCATCCCGGTCAGGCATTGC TTTTTGTCCCTGCGG TERM 1976 3361448 - 3361487 + T 86 -13.6 -3.88603 | gap 1, opp_overlap 3361437 3361469, overlap 3361446 3361449 AGAACCGAGCCAAGC GGCCTGGCCG-GATGGGGA CAA TGCCCATCCCGGTCAGGCA TTGCTTTTTGTCCCT TERM 1977 3361449 - 3361486 + T 87 -17.1 -2.92077 | gap 1, opp_overlap 3361437 3361469, overlap 3361448 3361446 GAACCGAGCCAAGCG GCCTGGCCG-GATGGGGA CAA TGCCCATCCCGGTCAGGC ATTGCTTTTTGTCCC SRU_2719 3362466 - 3361747 - | hypothetical protein TERM 1978 3362331 - 3362353 + gT 73 -7 -4.28994 | overlap 3362332 GTGGGCTGGAGATCC AGTCGGAGAA TGA TTCTTCGACG TTTTCCTCGATCATG SRU_2720 3365276 - 3362397 - | acylaminoacyl-peptidase SRU_2721 3366565 - 3365345 - | beta-lactamase SRU_2722 3367175 - 3366708 - | hypothetical protein SRU_2723 3367743 - 3367213 - | hypothetical protein TERM 1979 3367769 - 3367732 - G 100 -22.1 -3.15579 | opp_overlap 3367734, overlap 3367744 CGAATGCCTTAGGAA GACCGCTGACAACGGAC GGCC GACCGTCGTCAGCGGTC AGTTCACCGCAGTTC TERM 1980 3367734 - 3367767 + g 77 -16.7 -2.52543 | opp_overlap 3367732 3367744 AATGCCTTAGGAAGA CCGCTGACAACGGAC GGCC GACCGTCGTCAGCGG TCAGTTCACCGCAGT SRU_2724 3369252 - 3367768 - | putative lipoprotein TERM 1981 3368118 - 3368130 + g 79 -2.6 -5.03314 | ACTCGGCCTGTGCGT CGGG AAGCC CCTG TTTTTTGAGCATCGA SRU_2725 3369377 - 3370516 + | two-component system sensor protein, putative SRU_2726 3370494 - 3371246 + | LytTr DNA-binding domain-containing protein SRU_2727 3371378 - 3373498 + | outer membrane receptor for transport of vitamin B, putative SRU_2728 3374011 - 3375186 + | hemin-binding periplasmic protein hmut precursor SRU_2729 3375193 - 3376350 + | hemin ABC transporter, permease protein, putative SRU_2730 3376542 - 3377678 + | aminopeptidase SRU_2731 3377782 - 3378603 + | hemin ABC transporter, ATP-binding protein SRU_2732 3378625 - 3379692 + | hemin-degrading family protein SRU_2733 3379751 - 3380173 + | hypothetical protein SRU_2734 3380410 - 3380898 + | hypothetical protein SRU_2735 3383465 - 3380961 - | TonB-dependent receptor domain-containing protein TERM 1982 3381663 - 3381717 + gF 86 -17.7 -2.72344 | overlap 3381665 GTTGTAGGCCACGTA GAGCTGGGGCGTCGGCTCCGCCCCG TACGT CGGGTCGTAGTCGACGCGCGTGCTC TGATTGACCGTGAGG TERM 1983 3381665 - 3381715 + gF 77 -14.5 -2.90723 | overlap 3381663 TGTAGGCCACGTAGA GCTGGGGCGTCGGCTCCGCCCCG TACGT CGGGTCGTAGTCGACGCGCGTGC TCTGATTGACCGTGA SRU_2736 3383464 - 3385869 + | hypothetical protein SRU_2737 3385915 - 3386880 + | hypothetical protein SRU_2738 3387799 - 3386918 - | hypothetical protein fabF 3388051 - 3389475 + | 3-oxoacyl-(acyl-carrier-protein) synthase II SRU_2740 3389563 - 3389973 + | thioesterase family protein SRU_2741 3390010 - 3390960 + | glyoxalase family protein SRU_2742 3390996 - 3391652 + | phospholipase/carboxylesterase SRU_2743 3391669 - 3393111 + | glycosy hydrolase family protein SRU_2744 3395132 - 3393684 - | hypothetical protein TERM 1984 3395218 - 3395165 - R 76 -9.4 -4.07568 | gap 2 TCGTGCGTTGGAAAA GCGACGAGGCGTCCTCC-T-CGTCCG CGTC CGGCCCCACGGGGGCCGCCGCGTCGC AGCCGCCGAGCACAA priA 3398006 - 3395529 - | primosomal protein N' TERM 1985 3396612 - 3396657 + g 71 -12.5 -3.24188 | gap 1 TCCCGAGGCGTCGGG CACGCGCTCCGGC-AGTTCGAG CCG CTCGTACTTGCCCCAGCGCGCG TTCATGGTGCTCTCC SRU_2746 3398954 - 3398112 - | hypothetical protein TERM 1986 3398400 - 3398432 + gr 81 -5.6 -4.72272 | gap 2, overlap 3398374 3398402 GTGCACGCAGCGCAC GAT-GCC-GTTCGTGC GGA GCACGCGCAGGCGATC TTTTTCGTCGACCCG TERM 1987 3398615 - 3398603 - GR 75 -6.9 -4.36914 | opp_overlap 3398602 3398603 CCCGGGTGTAGAAAA CGCGC CAG ACGCG GTTGTCGTCGGGGGA TERM 1988 3398907 - 3398887 - GR 75 -3.2 -4.75174 | overlap 3398890 3398891 GACGGAAGTGAAAAA TGACGGGG TACTT CCCCATTA CGCGTCCGCGTCCAT hrpB 3401442 - 3398905 - | ATP-dependent helicase HrpB SRU_2748 3402330 - 3401680 - | haloacid dehalogenase-like hydrolase, putative TERM 1989 3402641 - 3402653 + G 71 -3.3 -4.60797 | overlap 3402624 GCCGCCACCTCGGAA CGACG GCC CTTCG TTTTCTCTGTACGCC SRU_2749 3402384 - 3405203 + | hypothetical protein SRU_2750 3405797 - 3405279 - | putative periplasmic efflux protein SRU_2751 3407639 - 3406023 - | outer membrane efflux protein SRU_2752 3407668 - 3407958 + | hypothetical protein fabF 3409239 - 3407980 - | 3-oxoacyl-(acyl-carrier-protein) synthase II TERM 1990 3409361 - 3409315 - R 86 -11.6 -4.2074 | gap 3 GTCCCAATATACAAA CG-CCCGGCGAGCCGTCCGGCCC TTCC GGGACGG-CG-CTCACCGGAACG CAGGAGCAGGGGGAC acpP 3409612 - 3409376 - | acyl carrier protein metK 3409999 - 3411159 + | S-adenosylmethionine synthetase TERM 1991 3411208 - 3411234 + F 100 -21.6 -5.60689 | CATTCTGTCCTCCCG GCCCTCGTCGCC TCT GGCGGCGAGGGC TTTTTTGTTGTCTGG SRU_2756 3411374 - 3412057 + | hypothetical protein sigW 3412337 - 3412909 + | RNA polymerase ECF-type sigma factor TERM 1992 3413302 - 3413342 + G 70 -10.9 -3.6053 | overlap 3413305 3413326 CATCGGTCCAGCCCA CCGCGACCGCCTCGTCCCG GGC CGGGACCGTGTTGACGCGG TTCGTTTATACGAAC SRU_2758 3412890 - 3413588 + | isoamylase N-terminal domain-containing protein SRU_2759 3413595 - 3414827 + | hypothetical protein SRU_2760 3414787 - 3415860 + | hypothetical protein asg 3417091 - 3415880 - | asparaginase TERM 1993 3417497 - 3417539 + G 72 -13 -3.14132 | overlap 3417494 CGATCGCTTGATGCA GTACCTC-TACCGCTTCTTG GGCGA CAAGAAGCGGTGCGAGG-AC TTGCTGCAGGAGACG SRU_2762 3417405 - 3417983 + | extracytoplasmic function alternative sigma factor TERM 1994 3418043 - 3418068 + T 100 -18.3 -5.30616 | CACTGGGCGATGCCA CGCCGGATCCC TACA GGGGTCCGGCG TTTTTATTTGGCTCC TERM 1995 3418195 - 3418212 + T 73 -11.3 -3.63627 | ACCGTGGACTGGGCA GACGGAC ACAC GTCCGTC TTTCCCCTCTCGCGC SRU_2763 3418650 - 3418477 - | hypothetical protein SRU_2764 3420533 - 3418701 - | helicase domain-containing protein TERM 1996 3420410 - 3420390 - G 75 -6.7 -4.4078 | overlap 3420392 GTCGCGGAACGAAAA GTCCTCGGC CGG GTCGAGGCC GGGCAGGTCGGCGGC SRU_2765 3423476 - 3420657 - | X-Pro dipeptidyl-peptidase TERM 1997 3421168 - 3421123 - G 81 -3.7 -5.00616 | overlap 3421124 GCCGTCGTTAAAAAA CCGCCGCCGGAGTGCCCGTAG ATGC CCACGCGATCTCCGTCGATGA AGTCGTGGCGGGCCG TERM 1998 3421179 - 3421203 + g 71 -9.2 -3.78934 | GATGAAGTCGTGGCG GGCCGCGAGC TGCTC GATCGTGGCC TTCTTGTCCGCAAGC TERM 1999 3422641 - 3422612 - G 76 -6.3 -4.56775 | overlap 3422615 3422616 AGTTGCGGGCAAAAA CGACCGTCTCGCC GTCC GGGGAGACGTTGG CCCAGTCGGGATGAT menB 3424456 - 3423563 - | naphthoate synthase SRU_2767 3425623 - 3424526 - | hypothetical protein TERM 2000 3425585 - 3425569 - G 80 -9.3 -4.25104 | CCCCGGCGACGAAAA GCACGCC GAG GGCGAGC CCAGTCGCGAGACAC SRU_2768 3425678 - 3427084 + | hypothetical protein SRU_2769 3427193 - 3427753 + | peroxidase-related protein TERM 2001 3428163 - 3428115 - g 79 -8.8 -4.42386 | overlap 3428130 GTCGTACCGAGAAAA GGCCCTCCAAACTGAGGG-CACCA CCG TGCTGGCCCAC-GTCCGGCGGGCC ACAGTCGGCGGCCCG SRU_2770 3427903 - 3428778 + | hypothetical protein SRU_2771 3428832 - 3429590 + | hypothetical protein TERM 2002 3430521 - 3430506 - f 74 -9 -3.87641 | AATAGTCGGGAGAAA TCCGAG GACG CTCGGA CGGGAGGCGGGACCC SRU_2772 3430685 - 3431689 + | IS110 family transposase SRU_2773 3431807 - 3432439 + | TetR family transcriptional regulator TERM 2003 3432732 - 3432763 + G 71 -9.4 -3.80174 | gap 1 GCTCGTGGAGGAGGG CGGCGTGCT-CTCCG CGG CCGAGCAGCAGGCCG TTATTCTCGCCGTCT pcaC 3432574 - 3433098 + | hypothetical protein TERM 2004 3433181 - 3433156 - g 81 -16.1 -3.14564 | overlap 3433158 TGACGCCCCCACCAA GACGGCGGCGA TGAA TCGCCGCCGAC CGAGTGCGCCGGCCT TERM 2005 3433179 - 3433158 - g 84 -17.3 -3.13522 | overlap 3433156 ACGCCCCCACCAAGA CGGCGGCGA TGAA TCGCCGCCG ACCGAGTGCGCCGGC TERM 2006 3433188 - 3433219 + G 100 -20.2 -5.4505 | gap 1 GCCGCCGACCGAGTG CGCCGGCC-TCCCCC CTC GGGGGACGGTCGGCG TTTTTTGTTGGGGCG SRU_2775 3433112 - 3434035 + | putative methionine sulfoxide reductase SRU_2776 3434058 - 3434834 + | peptide methionine sulfoxide reductase SRU_2777 3436291 - 3434858 - | Na+/H+ antiporter, putative SRU_2778 3437065 - 3436379 - | short chain dehydrogenase/reductase family oxidoreductase TERM 2007 3438710 - 3438752 + G 75 -9.7 -4.07568 | overlap 3438711 GTACTTCCTGTCGAG TGCGCTCATCTCGGCGACG ACGGC CGTCGCCACGTTTAGCGCG TTTTCCAAGAAGCCG TERM 2008 3439088 - 3439059 - g 89 -17.9 -3.31188 | gap 1 GAGGAGAAGGAGGAA CG-GGAGGAGGCCG CGG CGGCCCCCTCCGCG TAGGCGTTCGGCGAT SRU_2779 3437463 - 3439091 + | sodium:solute symporter family protein SRU_2780 3439239 - 3439988 + | halorhodopsin (HR) TERM 2009 3440427 - 3440417 - g 72 -6.8 -4.18018 | CTCCCTCATGGAAAA CCTC CAC GAGG GCGAGTGGGAGCAGA SRU_2781 3440115 - 3440864 + | oxidoreductase, putative SRU_2782 3441268 - 3440900 - | hypothetical protein SRU_2783 3441563 - 3443056 + | HAD family hydrolase 5'-nucleotidase nuoH 3444371 - 3443202 - | NADH dehydrogenase i, h subunit TERM 2010 3444355 - 3444370 + g 74 -5.4 -4.57341 | gap 1, opp_overlap 3444330 3444329, overlap 3444355 3444356 CCGCTCCTGGAATGC T-GCGGG GCC CCCGCCA TTTTTGGGGAGAGTT SRU_2785 3445082 - 3444426 - | hypothetical protein TERM 2011 3444726 - 3444716 - G 76 -8.2 -4.19123 | opp_overlap 3444722 CAGAAATGACAGAAA CGGG GTG CCCG GTGGGGTTTTCGGTC SRU_2786 3446002 - 3445313 - | transcriptional regulator, TetR family protein TERM 2012 3445917 - 3445927 + g 79 -2.4 -5.07486 | TCAACGATGGTGCGG CGGC GCT GGCG TTTTTCTTCGCGCTG TERM 2013 3447225 - 3447243 + G 81 -5.8 -4.72272 | GGTCGCTCAGCGCAT CGCCGAGG ACA CCGGGGCG TTTTTGGTGGACCAG SRU_2787 3446368 - 3447768 + | cysteine synthase B SRU_2788 3448643 - 3447954 - | two-component response regulator TERM 2014 3448029 - 3448040 + g 84 -5.8 -4.8622 | overlap 3448025 3448018 CAGGTCCTCCACGGT CTCG TGGC CGAG TTTTTCCTTCGCACG SRU_2789 3450036 - 3449275 - | LuxR family DNA-binding response regulator SRU_2790 3450895 - 3450194 - | response regulator receiver:histidine kinase TERM 2015 3450813 - 3450792 - G 77 -5.1 -4.57569 | overlap 3450794 GTATCGCTGGAAAAA TCCTGGTCG TTCT CGAGCAGAA TGTCGGACAGACGCT coaE 3452003 - 3451404 - | dephospho-CoA kinase SRU_2792 3452492 - 3452100 - | HIT-like protein TERM 2016 3452563 - 3452539 - H 73 -11.3 -3.54029 | opp_overlap 3452539 3452548 GCGGACGAATCACAA GGGCCCTACCG GCC CGGAACGGCCC GTTTCACGACGCCTC SRU_2793 3452703 - 3453116 + | putative 6-pyruvoyl tetrahydropterin synthase folE 3453226 - 3453825 + | GTP cyclohydrolase I TERM 2017 3454250 - 3454265 + G 74 -10.4 -3.86015 | CCTCACGAGCGCCTT CGCCGT GACG ACGGCG TTTCTGCCCGCGATG TERM 2018 3454288 - 3454302 + G 75 -2.7 -4.71828 | CCGCGATGCGCGAAC GGGGC GAGGG GCACC TTTTCTTCATGGGCT SRU_2795 3453909 - 3454607 + | putative oxidoreductase SRU_2796 3455130 - 3454615 - | hypothetical protein SRU_2797 3455382 - 3455933 + | thioesterase domain-containing protein SRU_2798 3456617 - 3455937 - | acetyltransferase, TERM 2019 3456529 - 3456552 + g 72 -5.2 -4.36914 | gap 1, opp_overlap 3456538 GAGGCGGATCGTCGA GCGAGCACAGC GGC GTAG-GCTCGC TTTTGTCGGGGCCAC TERM 2020 3456715 - 3456687 - g 73 -9.5 -3.89822 | overlap 3456709 TATCGACTCCATAAA CCCTGCGCTCG GGGCAGA CGAACGCGGGG CGGGGGAGGCGGAGC SRU_2799 3456667 - 3457785 + | acetylornithine deacetylase nfi 3458464 - 3457796 - | endonuclease V TERM 2021 3458839 - 3458867 + G 100 -10.3 -5.45652 | gap 1 CTTGGACCCACTGCT GCCGCTCTCAGG AGGCTC CCTGGG-GCGGC TTTTTTGTTGGCGGT thrS 3458810 - 3460894 + | threonyl-tRNA synthetase infC 3461133 - 3461594 + | translation initiation factor IF-3 TERM 2022 3461644 - 3461656 + G 77 -3.3 -4.8667 | overlap 3461620 3461645 GTGCGTGGCCCCGCC CGTGC CCG GCACC TTTTTGTGGACTCTG SRU_2804 3461613 - 3461960 + | hypothetical protein TERM 2023 3461988 - 3462019 + F 73 -8.8 -4.08279 | gap 1, opp_overlap 3461973, overlap 3461981 CGCCGGGCGGCCTGC CGGATGGAGG-GC CTTGTTC GCTCCTCCATCTG TTGTTTGTGGAGTCT TERM 2024 3462038 - 3462075 + F 73 -8.4 -3.96506 | gap 1 TTTGTGGAGTCTTTC CCGGAGCGGG-GTTGGC CTGTC GCCAGCACTCGCTTAGG TTGTATTTTCGACTG TERM 2025 3462153 - 3462137 - g 71 -9.3 -3.81146 | GCGCGCAACGAACAA GCCGGCG ACC CGTCGGC GACGGAAGAAAATTC rplT 3462117 - 3462464 + | 50S ribosomal protein L20 TERM 2026 3462671 - 3462700 + F 100 -5.8 -5.4505 | gap 3, overlap 3462683 TTGCTGGTGACCTCG TCCCGCC---CCTGC CCC GCAGGCTCGGCGGGA TTTTTTATTGCCCCC TERM 2027 3462683 - 3462699 + F 74 -9.3 -3.86307 | overlap 3462671 TCGTCCCGCCCCTGC CCCGCAG GCT CGGCGGG ATTTTTTATTGCCCC pheS 3462777 - 3463787 + | phenylalanyl-tRNA synthetase, alpha subunit TERM 2028 3465608 - 3465597 - g 77 -3.6 -4.8048 | overlap 3465598 3465599 CGTGGAGACGAAAAA CCCG ATCT CGGA GGAGATGGCCGCCCT TERM 2029 3465658 - 3465614 - g 75 -15.6 -2.78816 | gap 1, overlap 3465598 3465599 CGATCTCGGAGGAGA TGGCCGCCCTGCGCCCCCGGC TGCT GCCGGGCGCGCTGGA-GGTCA TGCAACACAACCGCA pheT 3463924 - 3466416 + | phenylalanyl-tRNA synthetase, beta subunit TERM 2030 3467056 - 3467038 - g 73 -13.1 -3.31144 | CGCGTACCTCGACAA CGGGGCC GACGG GGCCCCG AACACATCTTCGTCT SRU_2808 3466589 - 3467086 + | dopamine receptor D4 SRU_2809 3467181 - 3467480 + | hypothetical protein SRU_2810 3467544 - 3469553 + | ABC transporter, ATP-binding protein TERM 2031 3470389 - 3470401 + G 83 -4.7 -5.00616 | overlap 3470387 ACCGTATCTGGCCGT GGCGG CCT CCACC TTTTTTGAGCGCGAG SRU_2811 3469661 - 3470914 + | hypothetical protein SRU_2812 3472197 - 3471034 - | chitinase A1 precursor SRU_2813 3473430 - 3472261 - | Tat pathway signal sequence domain-containing protein TERM 2032 3472321 - 3472358 + g 74 -14.9 -2.94924 | gap 1, opp_overlap 3472329, overlap 3472322 GTTCATGCTGCCGGC CGCGAAGAGGGTGATGCC GCT GGCGTCGCCCTCGT-GCG CTTTCTCGATGAGCC TERM 2033 3472322 - 3472359 + g 88 -14.9 -3.91897 | gap 1, opp_overlap 3472329, overlap 3472321 TTCATGCTGCCGGCC GCG-AAGAGGGTGATGCC GCT GGCGTCGCCCTCGTGCGC TTTCTCGATGAGCCG SRU_2814 3475323 - 3473599 - | amidohydrolase family protein TERM 2034 3474565 - 3474622 + g 71 -12.6 -3.31792 | overlap 3474566 GTCCGCCCCGGCCTC AACGGCCGCCCGGGCGGTC-TCCAGCGC GGTG GCG-TGGACGGCCACCCGGGTGCCCGCG TTGTGGGCCTCGTCG TERM 2035 3474566 - 3474621 + g 77 -16.1 -2.58861 | overlap 3474565 TCCGCCCCGGCCTCA ACGGCCGCCCGGGCGGTC-TCCAGCGC GGTG GCG-TGGACGGCCACCCGGGTGCCCGC GTTGTGGGCCTCGTC SRU_2815 3475468 - 3475698 + | putative addiction module antidote SRU_2816 3475717 - 3476094 + | death on curing protein TERM 2036 3476845 - 3476868 + G 76 -8.8 -4.28018 | opp_overlap 3476832 3476844 3476845, overlap 3476844 ATCTGCTGAGGAAAG TCCGCGCAGG CTGA CTTTCGCGGA TTTTGCTGACCTGTT TERM 2037 3479439 - 3479411 - g 89 -2.3 -5.28176 | GTCATGGAGAAAAAA GCTCTATTCTCCA TAC TGGAGGAGAGCAC CAACCTGGCAGACTG TERM 2038 3480145 - 3480133 - g 71 -3.3 -4.66833 | CTCGAACTTTAAAAA CACAC TTC GTGAG ATTACGGACGGCAAC SRU_2817 3476075 - 3480202 + | hypothetical protein ccmG 3480946 - 3480353 - | cytochrome c biogenesis protein, thiol:disulfide interchange protein SRU_2819 3481731 - 3481003 - | thioredoxin, putative SRU_2820 3482183 - 3483292 + | THUMP domain/methyltransferase domain-containing protein TERM 2039 3484462 - 3484486 + G 71 -9.2 -3.85698 | GCCGACGCTCGCACG GGACCTGGCC GAGGA GGCCGTGTCC TTTCTCCGGGAGCGA SRU_2821 3483419 - 3485254 + | X-Pro dipeptidyl-peptidase TERM 2040 3485297 - 3485328 + T 91 -18.6 -2.87931 | opp_overlap 3485297 CCCCCCAACAGAAAA CGCCCCGCCGGCCC GACT GGCCCGACGGGGCG TGTCTCAAACCTAGA TERM 2041 3485328 - 3485297 - T 100 -20.8 -4.66537 | opp_overlap 3485297 CCCCCCAACAGAAAA CGCCCCGCCGGCCC GACT GGCCCGACGGGGCG TGTCTCAAACCTAGA SRU_2822 3485968 - 3485357 - | hypothetical protein TERM 2042 3486895 - 3486906 + G 76 -2.2 -4.9218 | gap 1, overlap 3486882 CCCGACTCCATGGCC G-GCG AGT CGCTC TTTTTCTCCTACGTC TERM 2043 3487484 - 3487434 - g 91 -11.8 -4.21908 | gap 2 GACGATTAGCGAAAA TGC-GCGCAGCGTCCAGCG-GGCC GCCGA GGCCACCCGGGACGCCGCCCAGCA GGCCGAGCGCAGCGG SRU_2823 3486421 - 3488265 + | methyl-accepting chemotaxis protein SRU_2824 3488914 - 3490200 + | cobalt-zinc-cadmium outer membrane resistance protein, putative TERM 2044 3490776 - 3490741 - g 71 -9.6 -3.78934 | gap 1 GGCCGTTGAGAAGAA CGTGCGGGCCGCCGAGC GCA ACT-GGCAGGCCGCCCG GCAGCGCCTCCGCTC SRU_2825 3490298 - 3491407 + | cation efflux system protein CzcB-like protein TERM 2045 3493071 - 3493050 - g 78 -6.5 -4.63486 | gap 1, overlap 3493051 ATCCCCCCAAGAAAA CGGAGCGCCG ACC CGGC-CTGCG GACGGCTCCCCCGGA TERM 2046 3494443 - 3494412 - g 73 -12.3 -3.35996 | gap 1 GAGCTTTATCGACAA CCTCCGCGAGCGGG GGCGT CCC-CTCGCCGAGG CCGTGCGAACGGGCG SRU_2826 3491404 - 3494730 + | cation efflux system protein czcA SRU_2827 3494759 - 3495097 + | nitrogen regulatory protein P-II SRU_2828 3495154 - 3495648 + | hypothetical protein TERM 2047 3495765 - 3495781 + G 79 -7.3 -4.61566 | CCTCGTACACAATCT TGCGGAT TGC ATCTGCA TTTTCTCCTTTCACA TERM 2048 3496003 - 3495966 - g 79 -13.4 -3.71873 | gap 1 GCACCGACAGCGAAA GCGCGACCGCGTCGGCG GACTG CTCCGAC-CTGTCGCGC CTCTCGGACGCCCAA TERM 2049 3496039 - 3496022 - g 70 -2.5 -4.59773 | overlap 3496024 TCGGACGCCCAAAAA CAGCGGC GCAA GCAGCAG GTGAATGCCCTGAAC SRU_2829 3495764 - 3496207 + | high-potential iron-sulfur protein SRU_2830 3496425 - 3497168 + | response regulator receiver domain-containing protein TERM 2050 3497439 - 3497462 + G 70 -6 -4.26344 | gap 1 AGGCCCACCACCGCC TGGCAGTCGAC CGG GTCGACC-CCA TTTTCGTGCAGGTCT SRU_2831 3497168 - 3498673 + | two-component sensor histidine kinase TERM 2051 3499025 - 3498996 - f 100 -15.7 -4.60797 | gap 1, overlap 3499016 CCGCCACATAGAAAA CGCCCGGCACCCCC ACC AGAGG-GCCGGGCG TCGGCGCTTCAGGGC TERM 2052 3499313 - 3499350 + G 73 -6.1 -4.37886 | CCTGCGGGGTCCCAC GACGCGGAGGAGGGCTG GCCG CGCCCCTTCAATGCGTC TTTTATAAACGATGC TERM 2053 3499429 - 3499448 + G 89 -2.2 -5.28561 | gap 1, overlap 3499432 AACTCCATTCATGCC CGATTTTTG TAA CAAAGA-CG TTTTTCTTATGTGTT SRU_2832 3499217 - 3501148 + | GAF domain-containing protein TERM 2054 3501230 - 3501196 - T 100 -21.4 -5.00616 | opp_overlap 3501192 3501227 GCCGGTCCCAAAAAA CGCCGCCGCCCTCCGG ACC CCGGACGACGACGGCG CAGCTGTTCCGCCTC clpB 3503957 - 3501267 - | ATP-dependent chaperone protein ClpB TERM 2055 3504919 - 3504892 - g 72 -14.2 -2.97707 | gap 1, overlap 3504886 3504889 CGACACGAAGAAGGA GGCCGTCAGCACG GCC CGTGCC-ACGGCC AAGGAGCAGGCGCCC SRU_2835 3504347 - 3505006 + | polyhydroxyalkanoate granule-associated protein PhaF, putative TERM 2056 3505044 - 3505069 + F 100 -11.7 -5.1675 | opp_overlap 3505044 CCGTACGGCACGAAA GCGGCCATCCC TCCA GGGTCGGCCGC TTTTTTCGTACATGC TERM 2057 3505069 - 3505044 - f 84 -13.9 -3.74693 | opp_overlap 3505044 CCGTACGGCACGAAA GCGGCCATCCC TCCA GGGTCGGCCGC TTTTTTCGTACATGC SRU_2837 3505487 - 3506080 + | hypothetical protein SRU_2836 3507882 - 3506077 - | ABC transporter, ATP binding/permease protein TERM 2058 3507453 - 3507422 - G 75 -7.2 -4.3739 | overlap 3507423 GACTGGGTCAGAAAA TTGGGGAGCGCG TCCTTCAC CGCGCTCCGCAC CGAGCCTACGTCGTT TERM 2059 3508013 - 3507989 - H 78 -6.4 -4.56597 | CTCGTTTGGGAAAAA GACGCCAAAC CAGTT GCTTAGCGCC GCGAATGGAGGCAGG SRU_2838 3508068 - 3508544 + | hypothetical protein TERM 2060 3508604 - 3508633 + F 73 -7 -4.26903 | overlap 3508606 GCCCAAAGACAATCT TGGCCCCCGGCG AATGCG CGCAGGGGCTCA TTTTCCTCGCGTGCC TERM 2061 3508943 - 3508955 + G 79 -4.7 -4.83615 | overlap 3508940 GGTCATCCTCCCCGC CCCGC ACG GCGAG TTTTTCTCGGAGCTG TERM 2062 3509407 - 3509392 - g 75 -4.6 -4.61199 | overlap 3509393 ACTTCACACAGAAAA GCGGCT ACCA AGCCGG GAAAAAACTTCTCGA TERM 2063 3509430 - 3509415 - g 79 -3.2 -5.03145 | overlap 3509417 CAAGCCGGGAAAAAA CTTCTC GAGG GAGAGG AACTCCCGGACGCGG rbsR 3508737 - 3509732 + | ribose operon repressor TERM 2064 3511120 - 3511143 + G 78 -5.9 -4.60487 | GGCGGGCTCTTTGTC CGTCGCGTG AACCAC CACGCCGCG TTTTTCACCCTCGTG SRU_2840 3509872 - 3511413 + | Na+/solute symporter TERM 2065 3511527 - 3511546 + F 72 -7.9 -4.15222 | opp_overlap 3511543 3511544, overlap 3511543 ACATTTTGATAACCT CCGGTTT ATTATG AAACCGG TTTCTTGAAACCCGT TERM 2066 3514286 - 3514303 + G 73 -4.1 -4.57569 | ACGTCGAGTACAAGG GGGTG AGCCTGAG CACCC TTTTTCAGGGCGTGC SRU_2841 3511699 - 3514743 + | hypothetical protein SRU_2842 3514826 - 3516361 + | hypothetical protein TERM 2067 3516512 - 3516569 + G 71 -13.9 -2.90901 | gap 1, overlap 3516513 TGCTGATTGTCGTCG CCGCCGGCCTCGTGC-TGGCGGGGTGCG ACT CGGGCCCCGCCACGGACACGGCGGACGG TGTGATTGCGCCTGT SRU_2843 3516412 - 3517368 + | hypothetical protein TERM 2068 3517966 - 3517947 - g 74 -5.8 -4.45517 | gap 1, opp_overlap 3517946, overlap 3517951 AAATGACCCAGAAAA TGCACGTTT AGA AAACG-GCA ATCTCGTCATCGAGG SRU_2844 3517423 - 3518538 + | beta-glucanase precursor xloA 3518734 - 3521334 + | xylosidase TERM 2069 3522716 - 3522728 + G 75 -4.8 -4.6902 | ACTGGTGGCCGCGAA CGCA TACAT TGCG TTTTTCGCCTTCTCC SRU_2846 3521487 - 3523016 + | sugar transporter subfamily protein SRU_2847 3525600 - 3523069 - | hypothetical protein TERM 2070 3525593 - 3525576 - G 70 -4.1 -4.43844 | GGACGAGGTAGAAAA GACGC GGGGCAGT GCGTC GGGCCATGGGTCGGC SRU_2848 3526522 - 3525659 - | ATP-binding protein of ABC transporter SRU_2849 3527944 - 3526547 - | membrane fusion efflux protein, putative SRU_2850 3529375 - 3527963 - | outer membrane efflux protein TERM 2071 3528143 - 3528188 + g 83 -15.9 -3.62224 | GGACCCGAGCTCGTA GCGCTCCTGGGCGGCCGTGCG GGCC CGCTCGGCGGCCCGAAGGCGC TTGTTCGCCGCCTCT SRU_2851 3530644 - 3529424 - | ABC transporter permease protein ybjZ 3531940 - 3530696 - | ABC transporter, ATP-binding protein SRU_2853 3532072 - 3533817 + | hypothetical protein SRU_2854 3534543 - 3534178 - | hypothetical protein SRU_2855 3535563 - 3534595 - | two-component system response regulator protein SRU_2856 3536759 - 3535488 - | transmembrane sensor histidine kinase transcription regulator protein SRU_2858 3538612 - 3537092 - | PKD domain-containing protein SRU_2859 3539082 - 3542237 + | hypothetical protein SRU_2860 3542292 - 3543809 + | hypothetical protein SRU_2861 3543994 - 3544806 + | endonuclease/exonuclease/phosphatase family protein SRU_2862 3545013 - 3544894 - | hypothetical protein TERM 2072 3545231 - 3545249 + H 80 -5.2 -4.90381 | overlap 3545221 3545233 CTTTACGCCCGAGGG TTGACGCC CCG GGGGTCGA TTTTCTTATCTTAAA TERM 2073 3545291 - 3545320 + H 83 -7.8 -4.53705 | TGAGCGATACGAACT GGCCTGCCTC ATCTTTTACA GGGGCGGGCC TTTTCTATCCCCGTT TERM 2074 3545387 - 3545433 + G 70 -10.7 -3.53012 | gap 1, opp_overlap 3545368 CATGAGCCTCGAAGT GGGCATG-GTCGGCGCCGGGGC CGGG GCGGCGGCGGCGACGTACGCCC TTTGCACCGCCCGCC SRU_2863 3545373 - 3546410 + | hypothetical protein SRU_2864 3547022 - 3546444 - | hypothetical protein TERM 2075 3547211 - 3547188 - H 86 -8.2 -4.56775 | gap 1, opp_overlap 3547187 3547205, overlap 3547189 ATGCCCCCCGAAAAA CCCGTTTCTGC GAC GC-GAAACGGA CTTCCGTTATTTATA SRU_2865 3547254 - 3548141 + | hypothetical protein SRU_2866 3548159 - 3548656 + | hypothetical protein SRU_2867 3548671 - 3549036 + | hypothetical protein TERM 2076 3550200 - 3550155 - g 70 -11.3 -3.60792 | gap 2 GCGTCAACTTCGAAA TCG-CAACGGACCCGCC-CGG CTTCCT CCACGACGAGTCCGTTGACGA GCTCGGCACCACGTT SRU_2868 3549101 - 3550285 + | ABC transporter substrate-binding protein TERM 2077 3550321 - 3550359 + F 81 -10.2 -4.21922 | overlap 3550316 TCGGTCCCCACCACC GCGCCCGCGGCCCC CGAACAACAGT GAGGTCGTGGGCGC TTTCGTTTTGGATGA SRU_2869 3550378 - 3550788 + | hypothetical protein SRU_2870 3551351 - 3550875 - | hypothetical protein SEQUENCE gi|83816857|ref|NC_007678.1| Salinibacter ruber DSM 13855 plasmid pSR35, complete sequence (length 35505) TERM 1 285 - 272 - g 70 -5.9 -4.20769 | ACATCCGAACACAAA CCGAC GATG GCCGG AGACGGTACAAGGGG repB 1 - 1011 + | initiator replication protein RepB TERM 2 1648 - 1671 + G 77 -5.8 -4.65895 | overlap 1649 AGGAGGTGAAGGAGG CCGGCGTGCC GATG GGCGCTCCGC TTTTTAAGTGGCGGG SRU_p0002 1500 - 2798 + | umuC protein SRU_p0003 3022 - 6297 + | transmembrane protein, putative TERM 3 6297 - 6281 - f 76 -6.6 -4.42386 | CCCGGACCCAGAAAA TTACCG TCGTG CGGTAA GTCGCCAGCAGACCA SRU_p0004 6325 - 7497 + | cellulose 1,4-beta-cellobiosidase-like protein SRU_p0005 7954 - 7538 - | ISSru1, transposase orfB SRU_p0007 9026 - 8790 - | hypothetical protein TERM 4 8935 - 8950 + g 100 -11.8 -4.34402 | TGGAACTGGGTCTCC CCGCCG GGCC CGGCGG TTTTCGTCTCGCCGG TERM 5 9186 - 9198 + r 70 -7.7 -4.00532 | opp_overlap 9177 GAAGAGGCCCTGAGC GCGAA AAG TTCGC TTTCCTCTTTCCCGA xerD 9481 - 9341 - | tyrosine recombinase XerD TERM 6 9581 - 9545 - H 100 -14.4 -6.31682 | gap 1, opp_overlap 9545 9548, overlap 9546 AAAAGCAAAAAAAAA GCACCCGCG-CCAGCGG AGGG CCGCCGATCGCGGGTGG TTGCATGGGACAGCA TERM 7 9580 - 9546 - H 100 -17.9 -4.33519 | gap 1, opp_overlap 9545 9548, overlap 9545 AAAGCAAAAAAAAAG CACCCGCG-CCAGCGG AGGG CCGCCGATCGCGGGTG GTTGCATGGGACAGC SRU_p0009 9991 - 10449 + | hypothetical protein SRU_p0010 10560 - 11018 + | hypothetical protein TERM 8 11095 - 11120 + T 100 -16.2 -4.95547 | opp_overlap 11095 GGGAAGTGCGTAGAA GCCCATCCGG TTAAAT CCGGATGGGC TTTTCTTCTTGTGAG TERM 9 11120 - 11095 - T 88 -16.2 -3.31322 | opp_overlap 11095 GGGAAGTGCGTAGAA GCCCATCCGG TTAAAT CCGGATGGGC TTTTCTTCTTGTGAG SRU_p0011 11738 - 11163 - | phage integrase family site specific recombinase TERM 10 11799 - 11789 - H 86 -8.2 -4.57755 | AGGGATCACAGAAAA CCCG CGC CGGG ACCAATTGTTACGCT TERM 11 13683 - 13664 - g 71 -9.2 -3.7795 | GGAAACGTGATCAAA GGCCTGTC GATA GACCGGCC GAATGCAGAAACAGT SRU_p0012 12254 - 14605 + | GLUG domain-containing protein TERM 12 14817 - 14834 + T 100 -9.8 -5.1675 | opp_overlap 14805 GAATGCGACCGATGC CCCGCC CGTAAA GGCGGG TTTTTTACTGACTGG SRU_p0013 15792 - 14839 - | hypothetical protein SRU_p0014 16826 - 15870 - | hypothetical protein TERM 13 16665 - 16677 + g 79 -3.3 -5.06414 | overlap 16654 GTCTTCGCGGACCTT CCGGT TCG AGCGG TTTTTCTTGAGCCAC SRU_p0015 17715 - 16921 - | hypothetical protein TERM 14 16954 - 16981 + g 72 -14.8 -2.74012 | CGTATTGGGCGTCTG GGCGGTGCCGTC GCGA GACGGCGGCGCC TGGTTGGGCTGCTGC SRU_p0016 17982 - 17749 - | hypothetical protein TERM 15 18010 - 18038 + H 71 -13.9 -2.52543 | CAGCTTTGGGGCGTT GGTGGGGGCTAAA ATT TTTGGCCCCCACA TCGGTTACGCGCCCT TERM 16 18150 - 18102 - g 74 -12.2 -3.54543 | opp_overlap 18102 18124 AGGGAGTGCGTCAAA GCGCCGAGCAGACCGCGGGTAG CATGT CCGCTGGCGGCCTGGCCGGCGC TATTGGCATGTTTGG TERM 17 18518 - 18532 + G 77 -3.5 -4.84359 | gap 1 ATGGAGGGCGGCTCC GCGAGC ATCA GC-CGC TTTTTATCCACCTCC SRU_p0017 18011 - 19828 + | hypothetical protein SRU_p0018 19847 - 20131 + | hypothetical protein TERM 18 20189 - 20166 - T 93 -16 -3.77831 | opp_overlap 20166 GGAGCAATAGCGAAA GCCCGGCCGA GGCT TCGACCGGGC TTTGTGATTCGGTGT TERM 19 20166 - 20189 + T 90 -13.8 -4.07306 | opp_overlap 20166 GGAGCAATAGCGAAA GCCCGGCCGA GGCT TCGACCGGGC TTTGTGATTCGGTGT SRU_p0019 20942 - 20271 - | putative lipoprotein SRU_p0020 21360 - 21091 - | hypothetical protein SRU_p0021 22285 - 21488 - | hypothetical protein SRU_p0022 22661 - 22302 - | hypothetical protein TERM 20 22801 - 22771 - g 100 -13.3 -4.85782 | gap 1 TGCGGCAAAAAGAAA CGCCCGGCACTCCC ACCA AGGAA-GCCGGGCG TCAGTGCTCATGTGG SRU_p0023 22683 - 22955 + | hypothetical protein TERM 21 23025 - 23010 - g 79 -2.5 -5.09895 | gap 1, opp_overlap 23005 23010 TAGTCATGGAAAAAA GCTCGC TTGCC GCG-GC GGGCTTTTCGTATTT TERM 22 23010 - 23029 + G 72 -4.9 -4.49756 | opp_overlap 23010, overlap 23005 TAGTCATGGAAAAAA GCTCGCT TGCCGC GGCGGGC TTTTCGTATTTCGGG TERM 23 23155 - 23178 + G 85 -13.1 -4.04206 | GTGGGGGTGTCGCGT CGCCCGGTC AGAATC GGCCGGGCG TTTCTATGCAACTCA SRU_p0024 22981 - 23487 + | hypothetical protein SRU_p0025 24088 - 23582 - | hypothetical protein SRU_p0026 24951 - 24283 - | nuclease, putative SRU_p0027 28187 - 24981 - | BseRI endonuclease, putative TERM 24 25508 - 25519 + g 75 -4.4 -4.65916 | GGTAGGTTAGCTTTT CAGA TTTG TCTG TTTTATTCGACTCCC TERM 25 27571 - 27554 - G 73 -11.3 -3.65001 | opp_overlap 27553 27552 27552, overlap 27552 GACATGACACAAAGA TCGGCGA ATGC TCGCCGA AGTCTTGCTTCATGC SRU_p0028 28463 - 28239 - | hypothetical protein parA 29091 - 28456 - | plasmid partition protein SRU_p0030 29599 - 29279 - | hypothetical protein TERM 26 29599 - 29611 + g 79 -4.1 -4.96762 | TCGTGTCAGCTTGCA TAACG CGT CGTTG TTTTTGTGATGTCTG SRU_p0031 31028 - 29658 - | hypothetical protein TERM 27 31124 - 31138 + r 75 -2.8 -4.95155 | opp_overlap 31117, overlap 31121 GCAAACTAGCGTGTG TCACGT GTC ACTTGA TTTTTGTCGTATGCA SRU_p0032 33632 - 31188 - | hypothetical protein TERM 28 31260 - 31278 + g 100 -10.3 -4.98255 | ATAGTCGCCTGGTGC CTCACCG ATCGG CGGTGAG TTTTTCTCATTCCAG TERM 29 33757 - 33788 + H 100 -18.1 -5.4492 | CTTCACGCCTTACTC GCGCCCTGCCTGA TAACTC TCAGGTAGGGCGC TTTTTTCTGTGTGTG SRU_p0033 33823 - 34917 + | hypothetical protein