TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.465948 %AT, 4010003 nt, 37521 terms. Intergenic: 0.533337 %AT, H2T: 675553 nt, 5714 terms; T2T: 174090 nt, 3510 terms; H2H: 292039 nt, 4143 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|60115462|ref|NC_006855.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 plasmid pSCV50, complete sequence (length 49558) spvR 1161 - 2054 + | transcriptional activator TERM 1 2525 - 2539 + F 72 -5 -4.65263 | overlap 2504 2503 GACATTATCAGTCTT CAGGAT TTC ATTCTG TTTATTTTCAGGAGT spvA 2566 - 3333 + | virulence protein TERM 2 3503 - 3472 - f 72 -5.8 -4.5442 | opp_overlap 3477, overlap 3474 3476 3477 GCTGTAAGCAGAAAA TATACCTGGCCATC GTCA GACGGCCAGTTTCA GGAGATAGTGTATGT TERM 3 3499 - 3476 - f 72 -8.8 -3.51909 | opp_overlap 3477, overlap 3474 3472 3477 TAAGCAGAAAATATA CCTGGCCATC GTCA GACGGCCAGT TTCAGGAGATAGTGT TERM 4 3498 - 3477 - f 78 -12.3 -2.70061 | opp_overlap 3477, overlap 3476 3474 3472 AAGCAGAAAATATAC CTGGCCATC GTCA GACGGCCAG TTTCAGGAGATAGTG TERM 5 3477 - 3498 + F 75 -10.1 -3.54741 | opp_overlap 3477 3476 3474 3472 AAGCAGAAAATATAC CTGGCCATC GTCA GACGGCCAG TTTCAGGAGATAGTG TERM 6 4805 - 4791 - g 78 -5.7 -4.70515 | opp_overlap 4790 CACAGGCAAAAGAAA CTCTG CTCTC CAGAG ACTATCTTTCCACAA spvB 3515 - 5290 + | 65 kDa virulence protein spvC 5571 - 6296 + | virulence protein TERM 7 6880 - 6890 + G 72 -4 -4.77036 | AGACAGCGCCATTGT TGAT AAA ATCA TTTTTGGTCATGAGC spvD 6557 - 7207 + | virulence protein VsdE TERM 8 7297 - 7276 - T 75 -10.1 -3.54307 | gap 1, overlap 7277 AAGATCCGCTGTAAA CCCTCGCCCA ATG CGGGCG-GGG ATATAAGGCGAAAAG TERM 9 7297 - 7277 - T 71 -10.3 -2.72263 | overlap 7276 AGATCCGCTGTAAAC CCTCGCCCA ATG CGGGCGGGG ATATAAGGCGAAAAG TERM 10 7322 - 7312 - T 79 -8.2 -4.23007 | opp_overlap 7312 GATATAAGGCGAAAA GCCC GAA GGGC TTTAGGGCAGGCTAC SCV07 7759 - 7334 - | transposase vsdF 7816 - 8166 + | virulence protein VsdF SCV09 8792 - 8292 - | hypothetical protein TERM 11 8642 - 8659 + gT 71 -6.9 -4.08216 | GACGCTCTTCGTAGT CCTCCAC ATCC GGGGAGG TTTTCCAGCCGGTCA SCV10 9259 - 8672 - | hypothetical protein TERM 12 9185 - 9173 - GR 79 -10.5 -3.48276 | CCGGTCGGCAGAGAA CGGGC TCT GCCCG ATCCGGGACGCGATG SCV11 9997 - 9512 - | hypothetical protein SCV12 10500 - 9991 - | hypothetical protein TERM 13 10016 - 10038 + g 74 -7.6 -4.16943 | opp_overlap 9994, overlap 10019 GCCTCCCGGACCGGG CAGGCTGCCT GCC AGGCGGCTAG TTTTGCCGTATCACC SCV13 11195 - 10644 - | hypothetical protein rsd 11986 - 11204 - | resolvase TERM 14 11632 - 11669 + g 88 -11.3 -4.08394 | gap 1, opp_overlap 11612 11611, overlap 11634 CCAGGCGGTGGGGCT GGCTGCC-GGACGGCA TCCGTCC TGCCGTTCTGGCCGCC TTTTCCGCCCGCTGT TERM 15 11634 - 11658 + g 74 -11.3 -3.30903 | opp_overlap 11612 11611, overlap 11632 AGGCGGTGGGGCTGG CTGCCGGACGG CAT CCGTCCTGCCG TTCTGGCCGCCTTTT SCV15 12542 - 12021 - | hypothetical protein SCV16 12829 - 12539 - | hypothetical protein ccdB 13136 - 12831 - | plasmid maintenance protein CcdB ccdA 13356 - 13138 - | plasmid maintenance protein CcdA TERM 16 13488 - 13506 + H 70 -4.7 -4.49344 | TTCGCCGCCATTATC TACATAT CTCTT ATATGTA TTTTCTCGTGCATTT SCV19 14032 - 14553 + | hypothetical protein TERM 17 14567 - 14540 - f 79 -12.1 -3.2048 | overlap 14541 TGCAAACTGGATCAA CTACCTGTCCC TGAGAG GGGACAGGTAA ACGTAAATATATAAC TERM 18 14566 - 14541 - f 80 -13.4 -2.51966 | overlap 14540 GCAAACTGGATCAAC TACCTGTCCC TGAGAG GGGACAGGTA AACGTAAATATATAA TERM 19 15069 - 15097 + F 79 -11.1 -3.35679 | gap 1, opp_overlap 15060 15058 GAAACAGGGACTCAC CGGCCTGACAGA AACAGA TCTG-CAGGCCG TTGTAACTCCCGGGG repA/repC 15796 - 16815 + | RepFIB replication protein A TERM 20 17056 - 17095 + T 86 -13 -3.46602 | opp_overlap 17057, overlap 17057 CTTATCTCAGGGAAG ATTTACTCACCACAGCTT ATAT AAGCTGTGGTGAGTGACG TTGTCATGTCAGGAC TERM 21 17094 - 17057 - T 88 -14.3 -3.09327 | opp_overlap 17056 17057 TTATCTCAGGGAAGA TTTACTCACCACAGCTT ATAT AAGCTGTGGTGAGTGAC GTTGTCATGTCAGGA TERM 22 17057 - 17094 + T 95 -16.5 -2.67747 | opp_overlap 17057, overlap 17056 TTATCTCAGGGAAGA TTTACTCACCACAGCTT ATAT AAGCTGTGGTGAGTGAC GTTGTCATGTCAGGA SCV21 17265 - 17104 - | site-specific recombinase SCV22 17704 - 17318 - | protein YgiW precursor TERM 23 18151 - 18179 + H 79 -2.5 -5.5208 | opp_overlap 18157, overlap 18152 18157 ATGTCTTTTCATGTG CAAAAATATTTGC ATT GCAGATATTTTGA TTTTTTGTGTTGTGG TERM 24 18157 - 18173 + H 78 -5.9 -4.90477 | opp_overlap 18157, overlap 18152 18151 TTTCATGTGCAAAAA TATTTGC ATT GCAGATA TTTTGATTTTTTGTG TERM 25 18216 - 18241 + H 100 -3.3 -5.88061 | overlap 18213 TTTATGCTGAATTTT GTATGGCAA ATAGATTC TTGCCCTAC TTTTTTTGATTTTTT TERM 26 18358 - 18370 + H 75 -6.3 -4.52589 | CCGGCATAAAGTTTG TTTCC TTT GGAAA TTTTCTGTCACAACA TERM 27 18571 - 18584 + G 77 -4.5 -4.84527 | GATTATTCAGGCACT CAGGG ACTA CCTTG TTTTTGGTGTGTCCA pefB 18410 - 18712 + | major pilu subunit operon regulatory protein PapB pefA 18987 - 19505 + | F107 fimbrial protein precursor TERM 28 19568 - 19545 - f 73 -10.2 -2.94322 | opp_overlap 19545 19546, overlap 19542 ATTTTATTTAAATGA CGCGGCGTAC GGCG GTGCGCCGCA TTTAATTACCTTGTT TERM 29 19545 - 19568 + F 84 -10.2 -3.97659 | opp_overlap 19545 19542, overlap 19546 ATTTTATTTAAATGA CGCGGCGTAC GGCG GTGCGCCGCA TTTAATTACCTTGTT TERM 30 19546 - 19567 + F 85 -13.7 -2.97511 | opp_overlap 19545 19542, overlap 19545 TTTTATTTAAATGAC GCGGCGTAC GGCG GTGCGCCGC ATTTAATTACCTTGT TERM 31 19835 - 19861 + G 72 -11.6 -3.0634 | TTAACCTGGATTTCC TGCAGGGAATGG GCG CCATTCCCTCCG TATTAAAATCCGGTT TERM 32 19870 - 19880 + G 70 -6.8 -4.07568 | opp_overlap 19870 CCCTCCGTATTAAAA TCCG GTT CGGA TTTTCCGGCCGGACA TERM 33 19893 - 19870 - g 77 -7.4 -4.25104 | gap 1, opp_overlap 19870 CCCTCCGTATTAAAA TCCGGTTCGGA TTT TCCGG-CCGGA CAGTATTATGTCGAC TERM 34 20807 - 20794 - g 77 -3.8 -5.06451 | TATCAGCTGAAAAAA CCGT TCCGGG ACGG TGAAAGCGGCACGTT TERM 35 22065 - 22079 + G 73 -5.6 -4.65895 | overlap 22066 CGTCGAGCGGGGGGA CGGCAG CGT CTGCCA TTTTTCAGTGAAAGG pefC 19732 - 22140 + | outer membrane usher protein PefC precursor TERM 36 22267 - 22252 - g 80 -9 -4.11304 | GGAAGGGAGAAAGAA CACCTC ATTT GAGGTG ACCAACCAGGCGGAT TERM 37 22350 - 22360 + G 74 -8.2 -3.9392 | CGGTGTATATGGTAC CGGC GCC GCCG TTCTTTAAGGTCAGG TERM 38 22399 - 22387 - g 80 -5.5 -4.87803 | CAGGCCCAAAGAAAA GCAGA TTA TCCGC ATCATGAAGACGGAC pefD 22142 - 22825 + | chaperone protein FanE precursor TERM 39 22911 - 22945 + T 79 -8.5 -4.21194 | gap 2, overlap 22903 22913 CATGCTGGCCGCCGG GCTGCTGCTTCCCCTGG TGG CC-GGGGCGGCGGC-GC TTTTCAGTGGTGGGA TERM 40 23428 - 23416 - T 74 -6.9 -4.36914 | overlap 23418 GTTCCGCGCAGAAAA CAGGC GGC GCCCG GCGACAGACGTACAA repA/repB 24364 - 23483 - | replication protein TERM 41 23679 - 23692 + g 74 -9.5 -3.6682 | CTGTCCGCGTCACGC CGCGC CCGG GCGCG TTTCAGTCCGTGCAG TERM 42 24294 - 24305 + g 75 -5.8 -4.64766 | TCTCTCGGCGTGAAT TCCG GATT CGGA TTTTTGACCTGTCGG tap/repC 24422 - 24345 - | hypothetical protein TERM 43 24474 - 24520 + H 100 -8.2 -5.1417 | gap 1 TACAGTTTAAGTAGG CCCCGTTAATCTT-TCGTTCC CGCCAA GAAATGAGAAGATTATCGGGG TTTTTGCTTTTCTGG SCV29 25006 - 25584 + | hypothetical protein TERM 44 25854 - 25865 + T 77 -7.2 -4.43859 | CTGCGCCAGCACCGC GCGG AGTT CCGC TTTTCTGGCGTTCTG fio2 26393 - 25830 - | conjugal transfer fertility inhibition protein FinO SCV31 27188 - 26448 - | conjugal transfer pilus acetylation protein TraX TERM 45 26743 - 26699 - G 72 -11.4 -3.07522 | gap 1, opp_overlap 26719, overlap 26702 ACAGCCGGTAACAGA TGACCAGCACCAGC-ACGCCG GCAA CGCCGTAGCTGGTTCCGGACA GGGGTATCCACGCCG TERM 46 26740 - 26702 - G 72 -11.7 -2.7535 | gap 1, opp_overlap 26719, overlap 26699 GCCGGTAACAGATGA CCAGCACCAGC-ACGCCG GCAA CGCCGTAGCTGGTTCCGG ACAGGGGTATCCACG TERM 47 27213 - 27224 + r 82 -7.2 -4.84918 | TCTTCCCGTATCAGT CCCC GCCC GGGG TTTTCTCTTTCTGCA SCV32 27931 - 27242 - | TraI protein TERM 48 27808 - 27818 + gr 81 -8.2 -4.2558 | overlap 27798 GCTCCAGCACGTCAT GGGC CGT GCCC TTTTGCTCCGCACTG SCV33 29724 - 27889 - | TraI protein TERM 49 28664 - 28650 - GR 78 -12.8 -2.70932 | opp_overlap 28660 GGGCCTTCTCAATCA CGCCGG CTT CCGGCG GCAGCATCCCGACCG TERM 50 29377 - 29403 + gr 84 -10.8 -3.89346 | overlap 29332 GACAGCGATATCCAC CGCCTGGTTGTG TGC CTCAGTCAGGCG TTTATCGCCTGCCAG TERM 51 29566 - 29595 + gr 80 -9.1 -4.07568 | CACCTCCTTATCGAC GGCGCCCTGCAGC CCCA GCTGCTCCGCGCC TTTTCCGGCCCAGCG SCV34 30419 - 29817 - | TrbH protein TERM 52 30080 - 30066 - G 90 -5.6 -5.1471 | ACGATAAAAAACAAA CCTGCC AGC GTCAGG GAGCGTTTTAACCTG TERM 53 30115 - 30141 + g 74 -10.2 -3.59979 | opp_overlap 30110 AGGGGAGAATGTGTA TCAGCTCGGTCA CCC TGATGGAGCTGA TTTACGGTGCCGAAA TERM 54 30271 - 30299 + g 91 -14.5 -3.07291 | opp_overlap 30262 AGATCAGGGCAGAGC TTGCCCGTCAGGG ACG CCCTGTCGGGCCA TTCGATCAGATGATT SCV35 32617 - 30419 - | conjugal transfer protein TraD TERM 55 30655 - 30679 + g 90 -5 -5.28176 | gap 1, overlap 30655 30656 CGCCTGCAGGCGTAT TCA-CGGCGGT ACCC GCCGCTGCTGA TTTTTTATCGCTGAC TERM 56 32109 - 32122 + g 77 -3.8 -5.03715 | overlap 32107 CCAATCAGGATATCG GACG CTTTTC CGTC TTTTTTCAGCATCCT TERM 57 32924 - 32892 - R 76 -12.1 -2.73243 | opp_overlap 32900, overlap 32891 ATTTATTTCGGAAAC GCCGGAGAGAAATGA AAT TTATTTCTTTCCGGC CCTGGACAACGAGCA TERM 58 32950 - 32985 + r 73 -11.2 -2.72227 | gap 1, opp_overlap 32946 GAGCAAAGCGAGGCG TCAGTCAGGAGGCCAGT CAG ACCGGCCTCCTGAA-GA TGATTAAAGAATATT SCV36 33720 - 32989 - | conjugal transfer surface exclusion protein TraT SCV37 35068 - 34262 - | TraG protein TERM 59 34425 - 34436 + g 72 -2.2 -4.85177 | TACTGTTTTTCCAGC TCAG AGTT CTGG TTTTTGATGTCATTT samA 35265 - 35687 + | SamA protein umuC 35687 - 36961 + | DNA polymerase V subunit UmuC parB 38020 - 37043 - | plasmid partition protein B parA 39222 - 38017 - | plasmid partition protein A TERM 60 38312 - 38288 - G 75 -7.1 -4.52857 | opp_overlap 38288 38309 ATTTTGGACATAAAA CCTACATTCCC GAT GAGATTGCAGG TGTGTCCATCCTGTT TERM 61 39552 - 39537 - H 76 -4.6 -5.0917 | overlap 39539 TGATTAAAAAAGAAA GAGGGG ACTG CCCCTG AAGGAATTGCAATTC TERM 62 39550 - 39539 - H 71 -7.2 -4.15047 | overlap 39537 ATTAAAAAAGAAAGA GGGG ACTG CCCC TGAAGGAATTGCAAT TERM 63 39607 - 39617 + H 74 -5.4 -4.57569 | opp_overlap 39607 TTGCCTGTGATACTA TGAC CGG GTCA TTTTTCAGAGCATGG TERM 64 39983 - 39999 + G 80 -10.9 -3.88232 | opp_overlap 39981 GGCATAAAAAACTGC CACTGGT GAT ACCAGTG TTGTTCTATACGGGG ytl2 39637 - 40578 + | hypothetical protein SCV43 41176 - 40610 - | hypothetical protein TERM 65 41046 - 41031 - G 75 -3.9 -4.93898 | ACATCACGAGAAAAA CGCCG TTGCTT CAGCG CAGTCGCCAGCCAGC TERM 66 41215 - 41201 - R 76 -4.3 -4.91712 | CGCAAGTCAGAAAAA TGATG TAATT CATCA GGCATAATCAGCACA SCV44 41568 - 41233 - | hypothetical protein ytl1 42168 - 41752 - | hypothetical protein tlpA 43369 - 42254 - | myosin heavy chain gizzard smooth muscle SCV47 44122 - 43643 - | hypothetical protein TERM 67 44163 - 44118 - G 89 -13.7 -3.74693 | opp_overlap 44119 44129, overlap 44122 GCGCAGGGGATTAAA TGCATGATTAATGCTAATGTA TGCG TACATTAGCATTAATCACATA AGTCAGTGAAAATAA TERM 68 44159 - 44122 - H 100 -18.9 -2.67981 | opp_overlap 44119 44129, overlap 44118 AGGGGATTAAATGCA TGATTAATGCTAATGTA TGCG TACATTAGCATTAATCA CATAAGTCAGTGAAA TERM 69 44129 - 44152 + H 77 -11.2 -3.16881 | opp_overlap 44122 44118, overlap 44119 TAAATGCATGATTAA TGCTAATGTA TGCG TACATTAGCA TTAATCACATAAGTC TERM 70 44528 - 44518 - H 70 -2.4 -4.99134 | ACTGCAAATGAAAAA TGCC ACC GGCT CACATTAAGTGACAA TERM 71 44828 - 44838 + G 70 -6.8 -4.12532 | overlap 44811 CTGAAACAAACTCTT GCAG TAT CTGC TTTGTCTGTCACCGG TERM 72 45424 - 45412 - g 71 -4.8 -4.62904 | AAACATCCGCAAAAA CAGC CCGGT GCTG AAACAACTGGAAGAT mig5 44771 - 45511 + | carbonic anhydrase chloroplast precursor TERM 73 45616 - 45631 + F 72 -3.2 -5.06505 | opp_overlap 45616, overlap 45618 45624 TACACCCAAAACGCA CAGTCT GGTG AGACAG TTTTTCTGTCTCATT TERM 74 45624 - 45644 + F 80 -9.8 -3.95126 | opp_overlap 45616, overlap 45618 45616 AAACGCACAGTCTGG TGAGACAG TTTTT CTGTCTCA TTTGGGTTGTTTTTA TERM 75 45837 - 45823 - g 72 -3.5 -4.83169 | gap 1, overlap 45824 ATTCGTGCAGAAAAA GCCAGC GGAA GC-GGC CGGACCGGAAGGAGC rlgA 45646 - 46278 + | integrase-like protein Y4LS TERM 76 46567 - 46544 - g 95 -10.2 -4.62622 | CGAACCACAAATAAA TCCGGCCGCC ATCT GTCGACCGGA CGGGCAATACAGCTG SCV50 46262 - 47926 + | hypothetical protein TERM 77 48296 - 48285 - g 71 -7.2 -4.05875 | opp_overlap 48284 48285, overlap 48286 GTCAAAAAAGGCAAA CGCC CGGT GGCG CTGTTTGTTGATGAA TERM 78 48459 - 48471 + G 75 -6.3 -4.62069 | GTGGAGGAAATTGGC TATCG TAC CGATA TTTTTACACTGGACG SCV51 47916 - 48884 + | hypothetical protein SEQUENCE gi|60115514|ref|NC_006856.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 plasmid pSC138, complete sequence (length 138742) SC001 466 - 819 + | hypothetical protein SC002 1068 - 1460 + | hypothetical protein TERM 1 1747 - 1792 + G 78 -11.9 -3.21099 | opp_overlap 1764 GGGTTTATTGCTCGT GATGATCGTCCGACAGATTCC AACG GGAATCTGGTGGATGCGCATC TTCATCCTCGGCGCA pecM 1598 - 2482 + | hypothetical protein tetA 3713 - 2514 - | tetracycline efflux protein TERM 2 3444 - 3433 - G 74 -7.2 -4.11275 | overlap 3434 AGAACCCAAAGGAAA GGCG CCGT CGCC ATGATGGCGTAGTCG tetR 3792 - 4469 + | RK2 tetracycline repressor protein tnpA 4743 - 4501 - | relaxase/helicase TERM 3 4554 - 4576 + g 100 -14.9 -4.7373 | TCCACCGCGTCAGAC GCCCGTAGC AGCCC GCTACGGGC TTTTTCATGCCCTGC tnpA 5475 - 4801 - | transposase tnpA 8786 - 5814 - | transposase tnpR 9088 - 8789 - | recombinase TERM 4 8901 - 8914 + gr 75 -6.7 -4.49556 | AACTCGGCAATTTGT TCGCT GTTC AGCGA TTTCTTTCGTCCCCG tnpA 9392 - 9000 - | putative transposase TERM 5 9121 - 9144 + gr 71 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC TERM 6 9604 - 9583 - R 71 -7.9 -3.98172 | gap 1, opp_overlap 9583 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC TERM 7 9992 - 9966 - R 100 -9.5 -6.18768 | gap 1, opp_overlap 9966 AAAATATAAAAAAAA GCCACCA-ATCC TGCC GGATACGGTGGC TTAAATACAGAATTA cat2 10655 - 10014 - | chloramphenicol acetyl transferase II TERM 8 10773 - 10798 + r 100 -10.5 -5.09762 | opp_overlap 10767 10765, overlap 10767 10766 10774 GTAATAATACCCGAT ACGGGCTTAAT CTGT ATTAAGCCCGG TTTTATTTATTCCGG TERM 9 10774 - 10797 + r 93 -14 -3.64772 | opp_overlap 10767 10765, overlap 10767 10766 10773 TAATAATACCCGATA CGGGCTTAAT CTGT ATTAAGCCCG GTTTTATTTATTCCG SC012 11239 - 10805 - | hypothetical protein TERM 10 11668 - 11692 + Gr 82 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 11 11823 - 11802 - gR 71 -7.9 -3.98172 | gap 1, opp_overlap 11802 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC tnpA 12952 - 12035 - | transposase tnpA 11484 - 12089 + | transposase tnpR 13440 - 12955 - | resolvase TERM 12 13408 - 13459 + g 86 -7.2 -4.79752 | overlap 13396 CTTGACATCCTTGCC GGATGCCTTGTCGCTAAAAGGGCA CTGT TGCAAAGTTAGCGATGAGGCAGCC TTTTGTCTTATTCAA tnpA 14085 - 13480 - | transposase TERM 13 13746 - 13767 + Gg 71 -7.9 -3.98172 | gap 1, opp_overlap 13746 GTTTGAGCAGAGCAA GCGCGCGACC ATA GG-CGGGCGC TTTATCCGTGTTGAT TERM 14 13901 - 13877 - Gg 82 -5 -5.05601 | gap 1 GAGGAGAGATAAAAA TCGACAGTGCG GCCC CGG-CTGTCGA CGGCCCGGTACAGAT TERM 15 14228 - 14205 - gH 71 -6 -4.30576 | GCTCCATCAGCAAAA GGGGATGATA AGTT TATCACCACC GACTATTTGCAACAG tnpR 13657 - 14634 + | hypothetical protein tem-1 14817 - 15626 + | beta-lactamase TERM 16 15743 - 15760 + T 78 -5.6 -4.79223 | opp_overlap 15743 ATTTTTAATTTAAAA GGATCT AGGTGA AGATCC TTTTTGATAATCTCA SC019 15810 - 15718 - | hypothetical protein TERM 17 17272 - 17305 + G 76 -11.7 -3.15861 | gap 1, opp_overlap 17270 17269 AACGCTGGACAACGT GCCGCGCGCGCTCG CCAACTT CGA-CACGCGCGGC TTCATCAAACTGGTG merA 15842 - 17536 + | putative mercuric reductase merD 17554 - 17916 + | transcriptional regulator MerD merE 17913 - 18149 + | putative mercury resistance protein urf2 17969 - 18853 + | Urf2 TERM 18 19511 - 19481 - g 93 -17 -2.90797 | overlap 19476 TGCAGATAGACCATA CGGTCATCGACC TGATCGT GGTCGATGACCG CGACCGGCAACCTAT TERM 19 20050 - 20090 + G 75 -11.3 -3.41693 | gap 2, overlap 20032 CGCTGGGCCGAGGCC GTGGCGCGTGTCGGCGTAC CGGCC GT-CGTC-ACACGCGCTAC TTCGTTCCTGGTCGA tniAdelta1 18892 - 20196 + | TniAdelta1 TERM 20 20526 - 20550 + G 82 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 21 20681 - 20660 - g 71 -7.9 -3.98172 | gap 1, opp_overlap 20660 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC tnpA 20225 - 20947 + | hypothetical protein aph 21952 - 21137 - | aminoglycoside 3'-phosphotransferase TERM 22 22386 - 22410 + G 82 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 23 22541 - 22520 - g 71 -7.9 -3.98172 | gap 1, opp_overlap 22520 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC tnpA 22085 - 22822 + | hypothetical protein tnpR 22815 - 23201 + | hypothetical protein int2 24433 - 23420 - | hypothetical protein TERM 24 23773 - 23747 - G 71 -10.1 -3.5616 | gap 1, opp_overlap 23746 CGCAAAAACCCAGAA CCACG-GCCAGG AATG CCCGGCGCGCGG ATACTTCCGCTCAAG TERM 25 24917 - 24931 + G 88 -11.4 -4.13246 | ACTCTGGCACTACCT CACGCC CAC GGCGTG TTTCTATCTGAGGTA tri 24578 - 25075 + | dihydrofolate reductase TERM 26 25095 - 25115 + T 80 -12.7 -3.06796 | TCCGTCAACGGGACG CCAAAATGC TGC GCATTTTGG TTCCCTCCGCTGCGC TERM 27 25215 - 25234 + T 75 -6.4 -4.5366 | overlap 25209 CGGCATTTAGCTTTT CAGGCGTT ATTC AGTGCCTG TTTTGCCTTTTTTCC TERM 28 25339 - 25364 + T 100 -11.1 -5.055 | overlap 25340 CTATCGTTTTTGCAG TGCTGTGCCGC CTCG GTGGCGCAGCG TTTTTTCACGGTTAG TERM 29 25340 - 25363 + T 88 -12.4 -3.62577 | overlap 25339 TATCGTTTTTGCAGT GCTGTGCCGC CTCG GTGGCGCAGC GTTTTTTCACGGTTA SC031 25449 - 25324 - | hypothetical protein TERM 30 25438 - 25461 + g 84 -13.2 -3.06133 | gap 1 TAACATTTCGGTCAA GCCGACCCGCA TTC TGCGG-TCGGC TTACCTCGCCCGTTA aadA2 25483 - 26274 + | aminoglycoside resistance protein TERM 31 26294 - 26317 + F 93 -16 -3.06133 | gap 1, opp_overlap 26286 26285, overlap 26311 TAACAATTCGTTCAA GCCGACCGCGC TAC GCGCGG-CGGC TTAACTCCGGCGTTA ebr 26438 - 26785 + | ORF3-QacEdelta1 fusion protein TERM 32 26856 - 26834 - g 79 -13.4 -2.78384 | CCTTCTTCGATGAGA GCCGGCGG CTAGACC CCGCCGGC GCTGTCACCGCGGCG TERM 33 27285 - 27309 + G 95 -8.5 -5.06414 | overlap 27286 GGTCGCTGCCGACCG GCTCATCCTCG ATC CGGGGATGGGA TTTTTCTTGAGCCCC TERM 34 27286 - 27308 + G 83 -12 -3.63367 | overlap 27285 GTCGCTGCCGACCGG CTCATCCTCG ATC CGGGGATGGG ATTTTTCTTGAGCCC sulI 26779 - 27618 + | dihydropteroate synthase sulI3' 27746 - 28246 + | SulI3' tniBdelta1 29207 - 28215 - | NTP-binding protein tnpA 29912 - 29220 - | putative transposase TERM 35 29341 - 29364 + gH 71 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC TERM 36 29668 - 29692 + Gg 82 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 37 29823 - 29802 - Gg 71 -7.9 -3.98172 | gap 1, opp_overlap 29802 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC SC039 31627 - 30035 - | hypothetical protein tnpA 29367 - 30089 + | hypothetical protein SC040 32112 - 31624 - | hypothetical protein SC041 33058 - 32105 - | hypothetical protein SC042 33997 - 33092 - | hypothetical protein TERM 38 33663 - 33681 + g 74 -4.6 -4.7458 | TCACTGCGGCCATCG TTCCAGAT CGC ATCTTGAA TTTCTTTATTATCCT TERM 39 34443 - 34466 + G 71 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC tem67 34275 - 34475 + | hypothetical protein TERM 40 34770 - 34794 + G 82 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 41 34925 - 34904 - g 71 -7.9 -3.98172 | gap 1, opp_overlap 34904 ATCAATACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC tnpA 34469 - 35191 + | transposase mefE 35250 - 35489 + | macrolide-efflux determinant yusZ 35635 - 36498 + | short chain dehydrogenase TERM 42 36701 - 36711 + G 81 -8.2 -4.26903 | ATAGATATATTTATT GGCG TTT CGCC TTTTGCTGAACTACC yqkA 36536 - 36781 + | hypothetical protein TERM 43 37687 - 37699 + G 84 -6.3 -5.00616 | GGAAGAGGTTTTTAC TTCCA TGA TGGAA TTTTTTAAAGAAAGA TERM 44 37987 - 37967 - g 100 -9 -5.38047 | TATGCATACAAAAAA GGTGCAGA TTATC TCCGCACC CATGATGTTAAGTCT sulII 37250 - 38041 + | dihydropteroate synthase tnpA 38288 - 38974 + | transposase TERM 45 39069 - 39090 + T 79 -4.3 -5.19879 | opp_overlap 39061 GTAGATACGCACTTT CCCAGTACG CCAC CGTAAGGGG TTTTTCTCTTTGGCA TERM 46 39192 - 39169 - T 100 -16 -3.37499 | gap 1, opp_overlap 39159 39169 TAACACCTGAATTAA GCCG-CGCCGC GAA GCGGCGTCGGC TTGAATGAACTGTTA TERM 47 39169 - 39192 + T 93 -16 -3.0792 | gap 1, opp_overlap 39169, overlap 39159 TAACACCTGAATTAA GCCG-CGCCGC GAA GCGGCGTCGGC TTGAATGAACTGTTA qacF 39553 - 39221 - | quaternary ammonium compound resistance protein TERM 48 39672 - 39712 + r 79 -9.8 -3.66429 | gap 2, opp_overlap 39668 39680, overlap 39671 CTGGCATCTAACGCT TGAGTT-AAGCCG-CGCCGC GAA GCGGCGTCGGCTTGAACGAA TTGTTAGACATTATT TERM 49 39703 - 39680 - R 93 -16 -3.06133 | gap 1, opp_overlap 39671 39672, overlap 39668 TAACGCTTGAGTTAA GCCG-CGCCGC GAA GCGGCGTCGGC TTGAACGAATTGTTA aadA2 40514 - 39723 - | aminoglycoside resistance protein TERM 50 40529 - 40577 + r 100 -14 -4.16016 | gap 2, opp_overlap 40547, overlap 40530 40547 TGATGTTTAACGCCT GAGCT-CAGCCGA-CCGAAACCGC GTA GCGGTTTTGGGTCGGCTGCAGCGA TTTGTTGGGCGATAG TERM 51 40530 - 40576 + r 100 -17.5 -3.09288 | gap 2, opp_overlap 40547, overlap 40529 40547 GATGTTTAACGCCTG AGCT-CAGCCGA-CCGAAACCGC GTA GCGGTTTTGGGTCGGCTGCAGCG ATTTGTTGGGCGATA TERM 52 40547 - 40557 + r 76 -8.2 -4.1899 | opp_overlap 40547, overlap 40530 40529 CTCAGCCGACCGAAA CCGC GTA GCGG TTTTGGGTCGGCTGC TERM 53 40557 - 40547 - R 72 -8.2 -3.65902 | opp_overlap 40547 40530 40529 CTCAGCCGACCGAAA CCGC GTA GCGG TTTTGGGTCGGCTGC cmlA 41866 - 40607 - | chloramphenicol resistance protein TERM 54 41964 - 41931 - R 76 -11.8 -2.65476 | opp_overlap 41927 41931, overlap 41930 AGGATTCATGAGAAC GCCGCAACAACC GAAAAATGAA GGTTGCTGCGGC TTACTTGTCTGCGTT TERM 55 41931 - 41964 + r 75 -9.6 -3.50734 | opp_overlap 41931 41930, overlap 41927 AGGATTCATGAGAAC GCCGCAACAACC GAAAAATGAA GGTTGCTGCGGC TTACTTGTCTGCGTT TERM 56 42108 - 42085 - R 93 -16 -3.06133 | gap 1, opp_overlap 42078 42077 CAACGCCGGAGTTAA GCCG-CCGCGC GTA GCGCGGTCGGC TTGAACGAATTGTTA aadA2 42931 - 42128 - | aminoglycoside resistance protein TERM 57 42968 - 42937 - R 100 -15.2 -3.52073 | gap 1, opp_overlap 42934 42941, overlap 42941 TGTCTAACACCAGAA TTAAGCCG-CGCCGC GAA GCGGCGTCGGCTTGA ATGACTTGTTAGCGC TERM 58 42964 - 42941 - R 100 -16 -3.49851 | gap 1, opp_overlap 42934 42941, overlap 42937 TAACACCAGAATTAA GCCG-CGCCGC GAA GCGGCGTCGGC TTGAATGACTTGTTA TERM 59 42941 - 42964 + r 93 -16 -3.11619 | gap 1, opp_overlap 42941 42937, overlap 42934 TAACACCAGAATTAA GCCG-CGCCGC GAA GCGGCGTCGGC TTGAATGACTTGTTA SC054 43585 - 42977 - | hypothetical protein TERM 60 43606 - 43656 + rH 72 -10.7 -2.88118 | gap 2, overlap 43605 GTGGGCGCTAACGCC TTGCT-CACCGG-AAAATTGCGAGC GCA GCGAGTAATTTTTCCGGTGCAGCAA CTTGTTGTACGGTGC sat 44760 - 43681 - | streptothricin acetyl-transferase TERM 61 45350 - 45376 + GH 75 -10.1 -3.5616 | gap 1, opp_overlap 45349 CTTGAGCGGAAGTAT CCGCGCGCCGGG CATT CCTGGC-CGTGG TTCTGGGTTTTTGCG int2 44690 - 45703 + | integrase tnpM 45648 - 46256 + | hypothetical protein TERM 62 46824 - 46848 + G 82 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 63 46979 - 46958 - g 71 -7.9 -3.98172 | gap 1, opp_overlap 46958 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC tnpA 46523 - 47245 + | hypothetical protein SC059 47770 - 47279 - | hypothetical protein TERM 64 47496 - 47518 + g 100 -16.3 -5.78622 | CCGCATGCAGACTTG CCGCCTCGG ACACC CCGAGGCGG TTTTTTTTCGCCTCG paa4 47877 - 48614 + | resolvase SC061 48611 - 48835 + | hypothetical protein insA 49264 - 49539 + | transposition protein insB 49458 - 49961 + | transposition protein SC064 50174 - 50815 + | hypothetical protein TERM 65 50953 - 50925 - f 93 -11.9 -3.81461 | opp_overlap 50926, overlap 50926 AAACAGTAACTTAAA GGCTCGATATATT TAT AATATATCGAGCT TTTTTCATGTCTAAA TERM 66 50952 - 50926 - f 93 -15.4 -2.87792 | opp_overlap 50926, overlap 50925 AACAGTAACTTAAAG GCTCGATATATT TAT AATATATCGAGC TTTTTTCATGTCTAA TERM 67 50926 - 50952 + F 100 -15.4 -5.24989 | opp_overlap 50925 50926 AACAGTAACTTAAAG GCTCGATATATT TAT AATATATCGAGC TTTTTTCATGTCTAA stra 51043 - 51936 + | StrA TERM 68 52256 - 52280 + G 82 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 69 52411 - 52390 - g 71 -7.9 -3.98172 | gap 1, opp_overlap 52390 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC tnpA 51955 - 52677 + | hypothetical protein traQ 53264 - 52737 - | TraQ-like protein TERM 70 53172 - 53148 - G 77 -11.5 -3.53091 | opp_overlap 53147 ACGGGCGCGGGCAAA CAGGGTAATCA TGC TGATCACCCCG ATGAATTCTCCCCAG traP 53968 - 53264 - | TraP-like protein TERM 71 53610 - 53625 + g 79 -3.3 -5.14965 | opp_overlap 53610 CTGTCGTGAAGCATA TTCAG TGTTGC CTGAA TTTTTTCATCCCGGT traO 55257 - 53968 - | TraO-like protein traN 56243 - 55260 - | TraN-like protein TERM 72 56038 - 56072 + g 77 -8.5 -4.14472 | gap 1, overlap 56039 GCCGCATCCTGTACC AGCGGGCTGGCCTGCC CGGG GGCAGGC-AGCTCACC TTTTACCAGTGTTGC TERM 73 56039 - 56071 + g 76 -12 -3.08201 | gap 1, overlap 56038 CCGCATCCTGTACCA GCGGGCTGGCCTGCC CGGG GGCAGGC-AGCTCAC CTTTTACCAGTGTTG TERM 74 56093 - 56103 + g 70 -6.8 -4.08692 | opp_overlap 56095, overlap 56087 CCAGTGTTGCCGGAA CACC TCC GGTG TTTTGGGAGGCATTC traM 56946 - 56254 - | TraM-like protein TERM 75 56832 - 56817 - G 73 -6.1 -4.52589 | TGCCCGTACATAAAA GCGCT TTTATC AGCGC AGGGACATTATTTGC traL 57290 - 56943 - | TraL-like protein sogS 57592 - 57308 - | DNA primase tnpA 58237 - 57632 - | transposase TERM 76 57898 - 57919 + g 71 -7.9 -3.98172 | gap 1, opp_overlap 57898 GTTTGAGCAGAGCAA GCGCGCGACC ATA GG-CGGGCGC TTTATCCGTATTGAT TERM 77 58053 - 58029 - G 82 -5 -5.05601 | gap 1 GAGGAGAGATAAAAA TCGACAGTGCG GCCC CGG-CTGTCGA CGGCCCGGTACAGAT TERM 78 58380 - 58357 - g 71 -6 -4.30576 | GCTCCATCAGCAAAA GGGGATGATA AGTT TATCACCACC GACTATTTGCAACAG TERM 79 59414 - 59427 + G 80 -9.5 -3.96148 | opp_overlap 59413 ACTACCCCATGATAT CCGGG TATA CCCGG TTTATGATCAACCCG TERM 80 59439 - 59452 + G 70 -9.5 -3.39803 | opp_overlap 59439 CCGGTTTATGATCAA CCCGG AAAC CCGGG TTATCGCTGTCGATC TERM 81 59549 - 59513 - g 74 -7.5 -4.11692 | gap 3 CAGGCAGGCTTAAAA CCGGC-ATCATGTACCTG CTTG CAGGT-CA-GATCGCCGG TGGTGACTTCACCCT TERM 82 59928 - 59912 - g 83 -10.1 -4.08064 | opp_overlap 59927 AACGCTTCCTGAAAA TGCCGGA AGG CCCGGCA CCAGATGGTAGTGGT traU 58327 - 60237 + | TraU-like protein TERM 83 60271 - 60290 + GF 74 -7.8 -4.15788 | overlap 60273 CCCCACGCTGCCGGA GACCTGCC AGAG GGCAGGTA TTTCTTAAAAAACTT TERM 84 60273 - 60288 + GF 83 -10.4 -3.6761 | overlap 60271 CCACGCTGCCGGAGA CCTGCC AGAG GGCAGG TATTTCTTAAAAAAC traV 60237 - 60851 + | TraV-like protein TERM 85 61113 - 61089 - gf 74 -8.5 -3.95584 | overlap 61071 61090 61093 TTTTCAGTAATGAAA CTCAGCGCCTC GAG GAGGCACGGAA AAGCTTCACCGTGCC TERM 86 61112 - 61090 - gf 70 -9.8 -2.97029 | overlap 61071 61089 61093 TTTCAGTAATGAAAC TCAGCGCCTC GAG GAGGCACGGA AAAGCTTCACCGTGC traW 60818 - 62020 + | lipoprotein traX 62049 - 62633 + | TraX-like protein TERM 87 63629 - 63605 - g 80 -4.9 -5.04249 | overlap 63606 TCTGGAAAAAAGAAA TTCTGGCAACG GAA CATTGCCGGAT ATCGAGACACGGATT TERM 88 64122 - 64112 - g 81 -4 -5.2197 | GATAAAAATGAAAAA TATC GGA GATA TAACAATGGTAAGTG traY 62661 - 64898 + | integral membrane protein exeAB 64969 - 65631 + | surface exclusion protein TERM 89 65652 - 65671 + T 100 -11.4 -4.78572 | opp_overlap 65652 65650 GCTCCCTCCATAACA GCCGGTTC AAAT GAGCCGGC TTTTGTTCATTACAA SC081 65912 - 65703 - | hypothetical protein SC082 66196 - 66480 + | hypothetical protein TERM 90 66523 - 66498 - T 90 -13.3 -3.53012 | opp_overlap 66498 TCTCTTTTTGTTAAA GGGCAGGAAGC GGTA ACTCCCTGCCC TTAGTTACGTTTCCA TERM 91 66498 - 66523 + T 77 -10.4 -3.43217 | opp_overlap 66498 TCTCTTTTTGTTAAA GGGCAGGAAG CGGTAA CTCCCTGCCC TTAGTTACGTTTCCA SC083 66841 - 66545 - | hypothetical protein TERM 92 66954 - 66990 + H 79 -11.1 -3.38699 | opp_overlap 66953 66964, overlap 66953 66955 66964 ACTCTGTAACGGAAC AGTAAAAAAACCGAC CTCACCA GTCGGTTTTTTTACA TCTGTTGTTTCTCAA TERM 93 66955 - 66989 + H 86 -14.6 -2.62496 | opp_overlap 66953 66964, overlap 66954 66953 66964 CTCTGTAACGGAACA GTAAAAAAACCGAC CTCACCA GTCGGTTTTTTTAC ATCTGTTGTTTCTCA TERM 94 66964 - 66980 + H 86 -5.1 -5.51402 | opp_overlap 66964 66953, overlap 66955 66954 66953 GGAACAGTAAAAAAA CCGAC CTCACCA GTCGG TTTTTTTACATCTGT TERM 95 66980 - 66964 - H 89 -5.8 -5.63374 | opp_overlap 66955 66954 66953 66964, overlap 66953 GGAACAGTAAAAAAA CCGACC TCACC AGTCGG TTTTTTTACATCTGT pndA 67141 - 67392 + | hypothetical protein TERM 96 67455 - 67431 - g 100 -13.5 -4.15222 | opp_overlap 67432, overlap 67432 AGCCTTCGCAACAAA GCGGCGGCAGA AAA CCTGCCGCCGT GTTGCCCGTTAACGT TERM 97 67432 - 67454 + G 100 -16.3 -3.06261 | opp_overlap 67431 67432 GCCTTCGCAACAAAG CGGCGGCAG AAAAC CTGCCGCCG TGTTGCCCGTTAACG TERM 98 67454 - 67432 - g 100 -17 -3.08812 | opp_overlap 67432, overlap 67431 GCCTTCGCAACAAAG CGGCGGCAGA AAA CCTGCCGCCG TGTTGCCCGTTAACG SC085 67389 - 67487 + | hypothetical protein TERM 99 67768 - 67744 - g 70 -5.6 -4.38154 | ATACCGTCCACAAAA CGCTTTCGGC ATACA GCCTCAAGCG CCCGCAGCTATTCTA pnd 67692 - 67784 + | hypothetical protein TERM 100 67931 - 67919 - g 70 -5.5 -4.44914 | TAGTTAATAAAAGAA TCCCC TTA GGAGA TGGAAATGTCGCAGT SC087 67864 - 68007 + | hypothetical protein TERM 101 68371 - 68349 - f 71 -10.6 -2.64155 | overlap 68345 68346 TTCCTTCGAAATTCA GCTTTCACCC ATT GGGTGAAAGA AAAGTGCTCAAAAAT TERM 102 69133 - 69119 - g 79 -2.8 -5.14965 | overlap 69120 ACTTTGATGAAAAAA TTATCG AAA CGATAG AATCTCTTGGATGCA TERM 103 69294 - 69280 - g 70 -2.8 -4.70879 | GTTAAATGGGAAAAA GACAGA AGA TTTGTC GTATCTCGCGTACTG tnpA 68464 - 69726 + | transposase ampC 70050 - 71195 + | beta-lactamase TERM 104 71203 - 71226 + F 93 -8.8 -4.7908 | overlap 71204 TGCAATAACTGACGA TGAGGCCCAG GATA TTGGGCCTCC TTTCTTTCTCTTTTT TERM 105 71204 - 71225 + F 85 -12.3 -3.43788 | overlap 71203 GCAATAACTGACGAT GAGGCCCAG GATA TTGGGCCTC CTTTCTTTCTCTTTT blc 71289 - 71822 + | outer membrane lipoprotein Blc sugE 72259 - 71819 - | SugE protein TERM 106 72201 - 72177 - G 73 -9.4 -3.90744 | gap 1, opp_overlap 72174 72177 TCCCCGGTGAAAGAA GCGTTTGCAGG TCGT CCTGCAAA-GC TAATGTGTGAAATGG TERM 107 73281 - 73257 - g 70 -5.6 -4.38154 | ATACCGTCCACAAAA CGCTTTCGGC ATACA GCCTCAAGCG TCCGCGGCTATTCTA SC094 73205 - 73297 + | hypothetical protein trbA 73421 - 74629 + | TrbA-like protein TERM 108 75202 - 75181 - g 77 -4.3 -4.93968 | opp_overlap 75192 ACTCACAAGCAAAAA TCCGGAAGC CGCA GCTGCCCGA CATAATCTGGCTGCT trbB 74648 - 75718 + | hypothetical protein TERM 109 75810 - 75832 + GT 70 -4.8 -4.52857 | overlap 75806 75805 75825 ATCTATGGCTTTTGC CTGGTGGCAA GTC TTGTGGCCAG TTTTATCTGGCCACT TERM 110 75825 - 75846 + GT 79 -11.6 -3.17194 | overlap 75810 CTGGTGGCAAGTCTT GTGGCCAG TTTTAT CTGGCCAC TTGCATTACCGGCAT TERM 111 77025 - 77004 - gT 79 -3 -5.15969 | opp_overlap 77004 77006, overlap 77006 CTGGAAGTCAAAAAA TATAAGGG GCGTTT CCCTTATC TGTGTTTCCTTGATG TERM 112 77477 - 77467 - gT 77 -6.8 -4.4891 | opp_overlap 77474 CTGACGATGAGAAAA GCTG CAG CAGC GATCCCGTTGTTATA SC098 77916 - 77821 - | hypothetical protein TERM 113 77996 - 77972 - gR 100 -2.1 -5.9873 | gap 1, overlap 77975 TCATCATAAAAAAAA CA-ACCGTCC GGACTG GGACGGAATG TACTGAACAGTGGCC TERM 114 77992 - 77975 - gR 95 -8.4 -5.03409 | overlap 77972 TCATAAAAAAAACAA CCGTCC GGACTG GGACGG AATGTACTGAACAGT trbC 75711 - 78002 + | TrbC-like protein TERM 115 78035 - 78006 - TR 73 -10.5 -3.1085 | opp_overlap 78008 GGAATGTACTGAACA GTGGCCGCGCCGG ATTT CTGGCGCGGCCTT TTTTTTAACCTGGAG TERM 116 78008 - 78033 + Tr 100 -19.7 -5.78622 | opp_overlap 78006 AATGTACTGAACAGT GGCCGCGCCGG ATTT CTGGCGCGGCC TTTTTTTTAACCTGG nikB 80739 - 78040 - | NikB-like protein TERM 117 79789 - 79805 + g 89 -3 -5.54894 | gap 1 AATGTCTTTTGGTAC TGGCGTG TAGT CAC-CCA TTTTTTTCATGAGTT TERM 118 80676 - 80711 + g 70 -6.8 -4.07746 | opp_overlap 80682 80685, overlap 80669 80677 CCCGGACCGAGACGT AGGACACCAGGTCTTC GAAC GAAGACTTGCCGTCCC TTCTCTTTTTCGGAA nikA 81082 - 80750 - | relaxosome component TERM 119 81169 - 81125 - H 74 -11.1 -2.79133 | gap 1, opp_overlap 81125 GAAGCCCTGACCAGA TG-GTAATTGTAATAGCGTC GCGTGT GACGGTATTACAATTACACA TCCTGTCCCGTTTTT TERM 120 81125 - 81169 + H 76 -11.8 -2.66882 | gap 1, opp_overlap 81125 GAAGCCCTGACCAGA TG-GTAATTGTAATAGCGTCG CGTG TGACGGTATTACAATTACACA TCCTGTCCCGTTTTT TERM 121 81185 - 81201 + H 75 -6.5 -4.5448 | TCCTGTCCCGTTTTT CAGGCCA TTA TAGCCTG TTATTTTTGTGCATC mobC 81316 - 81591 + | MobC-like protein TERM 122 81650 - 81670 + T 74 -10.5 -3.25906 | opp_overlap 81649 81650 81653, overlap 81648 81651 GATATGAACTACAAT TGATGTGAC AAT GTCACATCG TGTTCTGAGATTATG TERM 123 81651 - 81669 + T 76 -11.8 -2.55061 | opp_overlap 81650 81649 81653, overlap 81650 81648 ATATGAACTACAATT GATGTGAC AAT GTCACATC GTGTTCTGAGATTAT TERM 124 81726 - 81705 - T 100 -10.1 -6.30182 | opp_overlap 81705 81700 TTACAGAAAAAAAAA GCCCCGGCA TAAA TACCAGGGC TTTTCTGTTTAATCA TERM 125 81705 - 81726 + T 78 -5.7 -4.82128 | opp_overlap 81705, overlap 81700 TTACAGAAAAAAAAA GCCCCGGCA TAAA TACCAGGGC TTTTCTGTTTAATCA ydiA 82590 - 81739 - | YdiA TERM 126 82641 - 82653 + GH 70 -9.1 -3.32963 | overlap 82635 AGGTCATTTCCCGGA GGAGC GAA GCTCC TTCTGCCGTCCGGGT TERM 127 82877 - 82865 - gH 70 -10.5 -2.52623 | overlap 82864 82862 GTCTGCGGAGAACAG GCCGC AGT GCGGC GGCAGACAGGCAGAG TERM 128 82916 - 82894 - gH 70 -9.9 -2.94354 | gap 1, overlap 82886 82896 GCAGACAGGCAGAGA CAGCTGCGCC ATCA GGCGCAG-TG GCCTTACACACCGTA SC104 82592 - 82966 + | hypothetical protein TERM 129 83068 - 83082 + GF 93 -4.3 -5.57054 | opp_overlap 83068 TTACAACCAAAAAAA GTGAA ATTTC TTCAC TTTTTTTCACTTATT TERM 130 83082 - 83068 - gf 100 -5 -5.68023 | opp_overlap 83068 TTACAACCAAAAAAA GTGAAA TTT CTTCAC TTTTTTTCACTTATT SC105 82936 - 83133 + | hypothetical protein ygeA 83167 - 83418 + | YgeA SC107 83655 - 83449 - | hypothetical protein TERM 131 83703 - 83685 - R 73 -10.2 -3.04398 | opp_overlap 83675 83679, overlap 83684 TCCTGCTGGCAAAAG GCCCGGTA TTT TGCCGGGC TGTGAGGTTCTCATC ydgA 84619 - 83717 - | putative YhgA-like transposase TERM 132 84577 - 84602 + g 81 -2.5 -5.31855 | gap 1, opp_overlap 84574, overlap 84582 84584 ACGACCGGAACACGG CATCATG-CGGC GTG GGCGTCGTGGTG TTTTTCTTCTTACTC ccgA2 85080 - 84616 - | CcgAII protein TERM 133 85176 - 85147 - R 78 -12.1 -3.09557 | opp_overlap 85146 85147, overlap 85134 AAGTACCTGAACACA TCCTGCCACCTGC ACAG GCAGACGGCAGGG GTTAATCAGTGACAG ydfB 85448 - 85182 - | YdfB TERM 134 85515 - 85535 + r 100 -10.4 -5.72207 | opp_overlap 85515 GCGCCGGCGGAGAGA GGCAGGGT TTATC GCCCTGCC TTTTTTTCATTTCGG ydfA 85976 - 85542 - | YdfA TERM 135 86032 - 86045 + H 73 -9.5 -3.3334 | overlap 86025 CGGTTGCTCCCCGGA GGGGC GAAA GCCCC TTCTGCCGTCCACTT TERM 136 86285 - 86302 + G 83 -12.7 -3.17075 | overlap 86298 CGGCGGAAGGGTTGG CTGCGCC ATCA GGCGCAG TTGCCTTACACACCG SC113 86081 - 86410 + | hypothetical protein TERM 137 86591 - 86628 + T 100 -17.7 -3.53224 | gap 1, opp_overlap 86599, overlap 86592 CCTCACACCATGACG GGCAGGAAGGGCAGCGCC GCA GGCGCGGCCCT-CCTGCA TTTCAGGCAGGCGTA TERM 138 86592 - 86627 + T 100 -21.2 -2.71791 | gap 1, opp_overlap 86599, overlap 86591 CTCACACCATGACGG GCAGGAAGGGCAGCGCC GCA GGCGCGGCCCT-CCTGC ATTTCAGGCAGGCGT TERM 139 86621 - 86599 - T 100 -16.2 -3.15861 | opp_overlap 86592 86591 CATGACGGGCAGGAA GGGCAGCGCC GCA GGCGCGGCCC TCCTGCATTTCAGGC TERM 140 86630 - 86655 + T 79 -8.9 -4.07885 | overlap 86631 GCGGCCCTCCTGCAT TTCAGGCAGGC GTAA GCCTGCCAGGG TTTTCCGGCGGCCTG TERM 141 86631 - 86654 + T 73 -10.2 -3.04517 | overlap 86630 CGGCCCTCCTGCATT TCAGGCAGGC GTAA GCCTGCCAGG GTTTTCCGGCGGCCT ard 87595 - 86705 - | anti-restriction protein TERM 142 87541 - 87509 - G 70 -6.9 -4.18401 | overlap 87516 CCACAGAGCTGAAAA CCCACAAGGCCATGC CCC GCATGGCCGGGTAAA AGCGGAGCCGCCGGC TERM 143 87534 - 87516 - G 95 -14.6 -3.52113 | overlap 87509 GCTGAAAACCCACAA GGCCATGC CCC GCATGGCC GGGTAAAAGCGGAGC gp43 88263 - 87667 - | hypothetical protein psiA 88979 - 88260 - | plasmid SOS inhibition protein A psiB 89413 - 88976 - | plasmid SOS inhibition protein B TERM 144 89422 - 89455 + r 100 -14.5 -3.71848 | gap 1, overlap 89428 TCATCACGGTATCTC CCTCTGCCGCCCCGTC TCC GGCGGGGCGGT-GTGG TTGTTCATCAGGCGG TERM 145 89428 - 89450 + r 100 -18.4 -3.03203 | overlap 89422 CGGTATCTCCCTCTG CCGCCCCGTC TCC GGCGGGGCGG TGTGGTTGTTCATCA SC118 91421 - 89463 - | ParB-like nuclease TERM 146 89892 - 89906 + g 74 -2.7 -4.85599 | TCCCTCCGGTAACAG GGCCG CAAGA CGGGC TTTTTCTGCCATCAG TERM 147 91449 - 91474 + r 73 -11.1 -2.50699 | overlap 91448 91446 ATAATTGCTTATGTC CTGCCGGACGT TCGC GCGTCCGGCAC CTCTCTTACTTAAGA ykfF 91713 - 91480 - | YkfF TERM 148 91731 - 91751 + r 76 -11.8 -2.58544 | overlap 91730 TCATATCTCCGGTGA TGCCCCGC ACAGG GCGGGGCG GTTGTCACAGTCAGC ssb 92298 - 91771 - | single-stranded DNA-binding protein TERM 149 92341 - 92331 - RH 76 -8.2 -4.06148 | AAGATGTGAGATAAA CCGG ATA CCGG CGACGGGACGTTCAT TERM 150 92485 - 92510 + Gr 77 -7 -4.37886 | opp_overlap 92485 GGGGCGGACGCAAAA TTTTTAGCCG GGTTCA TGGCTAAAAA TTTTGTGGCCGGTGC TERM 151 92627 - 92644 + Gr 93 -12.7 -3.72576 | opp_overlap 92624 CAGGAGGGAAGACTG CTGCGCC ATCA GGCGCAG TTTCCTCACACACCG ychA 92996 - 92682 - | YchA SC121 92419 - 92751 + | hypothetical protein TERM 152 92994 - 92960 - GT 79 -10.7 -3.59979 | gap 2, opp_overlap 92960 92961, overlap 92961 CCTTCTGACCGGAAA GCCGGGCCGGCAGCGCC GCA GGCGCTGC-ACCCCG-C ATTTCCGGCAGGCGT TERM 153 92994 - 92961 - GT 73 -10.9 -2.75844 | gap 1, opp_overlap 92961 92960, overlap 92960 CTTCTGACCGGAAAG CCGGGCCGGCAGCGCC GCA GGCGCTGC-ACCCCGC ATTTCCGGCAGGCGT TERM 154 92997 - 93023 + Tr 76 -8.7 -4.07885 | gap 1, overlap 92998 CGCTGCACCCCGCAT TTCC-GGCAGGC GTCA GCCTGCCAGGGG TTTTCGCGCGGGCTG TERM 155 92998 - 93022 + Tr 70 -10 -3.04517 | gap 1, overlap 92997 GCTGCACCCCGCATT TCC-GGCAGGC GTCA GCCTGCCAGGG GTTTTCGCGCGGGCT ycgB 93203 - 93009 - | YcjB SC124 93258 - 93067 - | hypothetical protein ycgC 93677 - 93255 - | YcgC TERM 156 93695 - 93715 + r 83 -13.9 -2.57244 | overlap 93690 TCTCGTCTCCTTTAC AGGGGCGGC ATT GCCGCCCCG TCCGTTAATCAGTCC klcA 94149 - 93724 - | antirestriction protein KlcA TERM 157 93895 - 93879 - G 73 -10.9 -3.43564 | CAAGGGAAGTCAGAA TGATGCC TGC GGCATCA GCACTCACGGTACGG TERM 158 94486 - 94456 - R 88 -8.2 -4.79756 | overlap 94462 CACATAACTGAAAAA CCACAAGGCCATGC CCT GCATGGCCGGGTAA AGCGGAGCCGGCGGC TERM 159 94480 - 94462 - R 100 -14.6 -3.76107 | overlap 94456 ACTGAAAAACCACAA GGCCATGC CCT GCATGGCC GGGTAAAGCGGAGCC TERM 160 94559 - 94541 - R 100 -13.1 -4.72986 | GACCGGCAGGAAAAA GGCGGGG ATTTA CCCCGCC AACGTCATCATTTCC ycfA 95337 - 94567 - | YcfA SC128 95816 - 95382 - | hypothetical protein SC129 96051 - 95830 - | hypothetical protein TERM 161 96015 - 96027 + g 70 -3.3 -4.8048 | overlap 96008 96015 96012 TGGCCACCTCCGCCA CGTCG GCG CGAAG TTTTTCGTGTCCGGC mboIB 96735 - 96052 - | putative methylase SC131 96842 - 96967 + | hypothetical protein TERM 162 96996 - 96970 - T 89 -11.4 -4.11216 | CCGGGAGCGGTAAAA GCGCCCGTCCCG TGC CCGGCCGGACGC GGGATACTGACCACA TERM 163 97107 - 97092 - T 100 -10.4 -5.79595 | opp_overlap 97092 TCGGAAAAGAAAAAA GGACGC AACA GCGTCC TTTAACAGAGTTCAG TERM 164 97092 - 97107 + T 79 -10.4 -3.55622 | opp_overlap 97092 TCGGAAAAGAAAAAA GGACGC AACA GCGTCC TTTAACAGAGTTCAG parB 97548 - 97126 - | hypothetical protein SC135 98856 - 99203 + | hypothetical protein TERM 165 99288 - 99263 - T 100 -16.9 -4.13767 | overlap 99267 TCCTTTACCGGAAAA GAAACGGGCGG TTGC CCGCCCGTCTC CGTCATACTTCATCC TERM 166 99284 - 99267 - T 100 -14.1 -4.67048 | overlap 99263 TTACCGGAAAAGAAA CGGGCGG TTGC CCGCCCG TCTCCGTCATACTTC SC136 100269 - 99298 - | hypothetical protein TERM 167 100148 - 100131 - G 71 -8.4 -3.85698 | opp_overlap 100138 TGGCGCGGCGATAAA GCGGTG TGACTG CACCGC TGGCCAGTCGTTTAA TERM 168 100416 - 100429 + H 74 -8.1 -3.93367 | overlap 100414 AACGTGCCGGCACGG CCTGG GTAA CCAGG TATTTTATTCACAGA TERM 169 100492 - 100458 - H 73 -7.9 -4.08692 | gap 1 GAACCGTGCGCAAAA TGCTGTGGATAAGCTG GACA CAGCAG-TCCACAGCA GGCATACAGCCACAC impC 100618 - 100866 + | ImpC impA 100863 - 101300 + | ImpA TERM 170 102307 - 102291 - g 79 -3 -5.1675 | CGAGTTATCAAAAAA GTTGCT GGTGA AACAAC TACTTCCAACTTATC SC141 101637 - 103028 + | hypothetical protein SC140 101499 - 103028 + | hypothetical protein SC142 103028 - 104878 + | hypothetical protein TERM 171 105561 - 105537 - g 100 -4.3 -5.84381 | overlap 105539 CGACGAAGAAAAAAA TCGAAAAGACA GAT CGTCTTCTCTA GGCCAGATAAACGAC SC143 104875 - 106866 + | hypothetical protein SC144 106868 - 107308 + | hypothetical protein SC145 108523 - 107564 - | hypothetical protein TERM 172 107776 - 107792 + g 86 -3.7 -5.34555 | TATTGCCGAGCTTTG CAAAGAA GTC TTCATTG TTTTTTATGATCTGG SC146 109706 - 108525 - | hypothetical protein SC147 110061 - 111149 + | hypothetical protein TERM 173 111916 - 111895 - f 82 -7.3 -4.82901 | gap 1, overlap 111906 TCGGCGCCACAAAAA CACTG-GCCA AAT CGGCGCAGTG GGCGTCAAAGGAATG TERM 174 112911 - 112868 - g 100 -11.6 -4.75174 | gap 1, opp_overlap 112865 112893 112896 CAGCGAACTTAAAAA CGATCCGGTGGCCACCGCCAG TGC CCG-CGGCGGCTACCCGGTCG AGATAATTGACCGTA TERM 175 112893 - 112935 + G 87 -2 -5.60689 | gap 2, opp_overlap 112868, overlap 112865 112896 GCCACCGCCAGTGCC CGCGGCGGCTACCCGGTCGA GATAA TTGACCG--TAACCGCCCTG TTTTTTATTGTGTGC SC149 112815 - 113066 + | hypothetical protein SC150 113120 - 113425 + | hypothetical protein SC151 113298 - 113804 + | hypothetical protein SC152 114282 - 113896 - | hypothetical protein sopB 115474 - 114503 - | plasmid-partitioning protein TERM 176 115415 - 115383 - G 80 -12 -3.45366 | opp_overlap 115382 115411 CGCGCAATTAATGAA TCCACCATCGGCGC GGCCG GCGCCGGTGATGAA GTATCTTCAGTCGAT TERM 177 117800 - 117789 - g 100 -5.8 -5.95539 | GTTCAAACAAAAAAA TGCG CGAT CGCA TCAGTAATTCCCTGT repA 117380 - 118390 + | DNA replication protein TERM 178 118436 - 118474 + T 90 -9.7 -4.43576 | opp_overlap 118433, overlap 118438 CCGCTAAGGACATTC CATTGACTGTGATATGC ATCAC GCATACCGCAGTCAATA TTTATTCTCTATCAT TERM 179 118438 - 118472 + T 93 -12.3 -3.8147 | opp_overlap 118433, overlap 118436 GCTAAGGACATTCCA TTGACTGTGATATGC ATCAC GCATACCGCAGTCAA TATTTATTCTCTATC SC155 118924 - 118727 - | hypothetical protein TERM 180 119128 - 119176 + r 79 -10.7 -3.64198 | gap 2, opp_overlap 119144, overlap 119129 119131 GCGCGGGAGTACACC CTATTGCTACAGGTAAGCCTGTT CAAAA AACAGGCTTACC-GTA-CAATAA TTCTCTATATCCAAA TERM 181 119129 - 119175 + r 84 -14.2 -2.78197 | gap 2, opp_overlap 119144, overlap 119128 119131 CGCGGGAGTACACCC TATTGCTACAGGTAAGCCTGTT CAAAA AACAGGCTTACC-GTA-CAATA ATTCTCTATATCCAA TERM 182 119131 - 119173 + r 79 -12.4 -2.93455 | gap 2, opp_overlap 119144, overlap 119129 119128 CGGGAGTACACCCTA TTGCTACAGGTAAGCCTGTT CAAAA AACAGGCTTACC-GTA-CAA TAATTCTCTATATCC TERM 183 119162 - 119144 - R 71 -9.6 -3.12668 | opp_overlap 119131 119129 119128 TATTGCTACAGGTAA GCCTGTTC AAA AAACAGGC TTACCGTACAATAAT blc 119525 - 119181 - | putative lipoprotein TERM 184 119968 - 119929 - g 74 -7.9 -4.15565 | gap 1 TGCAGGACGGCAAAA TCGAGTCCCTGCGTCAGA TGATT TACGACGCAG-GACGCGA GTACCCAAGACCAGA TERM 185 120127 - 120117 - g 78 -2.4 -5.27923 | GAAGGCGATAAAAAA GCGC CGG GCGA CAACATCCTGCTCAG mlrA 119643 - 120368 + | putative transcriptional regulator yedX 120468 - 120878 + | hypothetical protein TERM 186 121270 - 121231 - g 79 -7.2 -4.49939 | gap 1, opp_overlap 121231, overlap 121233 ATATAACGCAGAAAA TGGCCGACTTTACGGCGGA CTA TCTGCCA-AAAATCGGCGA TCTGTCGGGATTTAT ybgA 120981 - 121940 + | putative pathogenicity island protein TERM 187 121996 - 122020 + F 79 -4.3 -5.15969 | overlap 121998 AAGCAGTACCCCGTT TAGACGACA CCCTCAC TGTCGTCTC TTTTTTGCATTCCAC TERM 188 121998 - 122018 + F 74 -6.9 -4.20888 | overlap 121996 GCAGTACCCCGTTTA GACGACA CCCTCAC TGTCGTC TCTTTTTTGCATTCC TERM 189 122317 - 122297 - g 77 -8.2 -4.18018 | overlap 122298 TCTGGGCAGGCAAAA CCCGCAGC GACCA GCTGCGGC GGATGAATTTGGCCG TERM 190 122316 - 122298 - g 76 -11.7 -3.10597 | overlap 122297 CTGGGCAGGCAAAAC CCGCAGC GACCA GCTGCGG CGGATGAATTTGGCC TERM 191 122613 - 122637 + G 73 -6.3 -4.39002 | GGAAGTGTCGCAGAT GCGCGAGTCGC TGC GTAACTGGCGC TTTTATCAGGAGTTT TERM 192 122882 - 122918 + G 91 -10 -4.55287 | gap 1, opp_overlap 122881, overlap 122880 AAGGGCTAAGCAGAC CGCTG-GAGCCGGCGGA ATTC TCCGACGGCACTCTGCG TTTTCTGTGCCTGGC recF 122086 - 123174 + | putative RecF protein tnpA 123959 - 123237 - | hypothetical protein TERM 193 123503 - 123524 + Gg 71 -7.9 -3.98172 | gap 1, opp_overlap 123503 GTTTGAGCAGAGCAA GCGCGCGACC ATA GG-CGGGCGC TTTATCCGTGTTGAT TERM 194 123658 - 123634 - Gg 82 -5 -5.05601 | gap 1 GAGGAGAGATAAAAA TCGACAGTGCG GCCC CGG-CTGTCGA CGGCCCGGTACAGAT TERM 195 123985 - 123962 - gR 71 -6 -4.30576 | GCTCCATCAGCAAAA GGGGATGATA AGTT TATCACCACC GACTATTTGCAACAG SC162 123414 - 124127 + | hypothetical protein SC163 125278 - 124205 - | hypothetical protein SC164 125501 - 125322 - | hypothetical protein relB 125813 - 126052 + | bifunctional antitoxin/transcriptional repressor RelB SC167 126570 - 126223 - | hypothetical protein relE 126052 - 126339 + | hypothetical protein istB 127422 - 126643 - | transposase/IS protein tnpA 128444 - 127422 - | putative transposase TERM 196 128468 - 128447 - H 85 -12.3 -3.46848 | overlap 128437 CAAAAGTGATCATAA GCTCCCCTG TATT CAGAGGAGC AGATTAACCCCTGGA TERM 197 129033 - 129045 + H 70 -9.1 -3.31248 | GCTCATATCACGGAT TCGCG AAA CGCGA TTATAGAAACTGTTG TERM 198 129769 - 129749 - g 70 -3.1 -4.78848 | overlap 129750 GCGTTAAACATAAAA TCGCCTCAG AAA CAGAAGCGT TAGAGGCAGCGTTGC SC170 129244 - 131451 + | hypothetical protein TERM 199 132306 - 132296 - g 70 -6.8 -4.18018 | opp_overlap 132295 132296 TGGGGCTATTGAAAA GCTC AAT GAGC GTTTAGACAGTTTAA SC171 131454 - 134036 + | hypothetical protein TERM 200 134028 - 134040 + T 76 -9.1 -3.83347 | CCAAACTGCGAGTCT CCCGT ATG ACGGG TTCTATTTGGGGTCT tnpA 134294 - 134082 - | hypothetical protein tnpA 135290 - 134457 - | hypothetical protein tnpA 135577 - 135314 - | hypothetical protein mpi 135590 - 135958 + | putative mannose-6-phosphate isomerase TERM 201 135968 - 135988 + T 70 -5.3 -4.40184 | opp_overlap 135969 135971, overlap 135971 TGTTAATGTAAAATT AGAGGGGGT ACA GCCCCCTTG TTTGTGTTTACTTAG TERM 202 135971 - 135985 + T 83 -9.2 -4.28747 | opp_overlap 135971 135969, overlap 135968 TAATGTAAAATTAGA GGGGGT ACA GCCCCC TTGTTTGTGTTTACT int2 136983 - 136006 - | integrase/recombinase insB 137167 - 137544 + | IS1 protein InsB TERM 203 137801 - 137779 - T 77 -6.9 -4.47328 | gap 1 AAGCTCATCATAAAA CCGGCGCCGG TTTG CCGGC-CGGG TGCCCCTCCCCACCA TERM 204 137862 - 137824 - T 100 -15.8 -4.21194 | opp_overlap 137824 CCCCACCACTGAAAA GCGCCGCCGCCCCCGGCC GAA GGCCGGGAGTAGTGTCGC TTTTAATGATGGGTG TERM 205 137824 - 137862 + T 100 -15.8 -4.3129 | opp_overlap 137824 CCCCACCACTGAAAA GCGCCGCCGCCCCCGGCC GAA GGCCGGGAGTAGTGTCGC TTTTAATGATGGGTG tnpA 138729 - 138055 - | transposase SEQUENCE gi|62178570|ref|NC_006905.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome (length 4755700) thrL 190 - 255 + | thr operon leader peptide TERM 1 302 - 280 - f 100 -12.7 -5.51046 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCACC TGAAC AGTGCGGGC TTTTTTTTCGACCAG TERM 2 280 - 302 + F 100 -12 -5.75342 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCAC CTGAACA GTGCGGGC TTTTTTTTCGACCAG TERM 3 1328 - 1351 + G 71 -11 -2.87132 | AAGGGATGATTGGGA TGGCGGCG CGTGTTTT CGCCGCCA TGTCTCGCGCCGGGA TERM 4 1626 - 1646 + G 70 -9.7 -3.36096 | overlap 1623 1619 CAATATCGTGGCGAT CGCTCAGGG ATC TTCTGAGCG TTCCATTTCTGTGGT thrA 337 - 2799 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 2801 - 3730 + | homoserine kinase thrC 3734 - 5020 + | threonine synthase yaaA 5887 - 5114 - | hypothetical protein TERM 5 5252 - 5238 - G 72 -2.1 -4.89477 | gap 1 TTTTCAATAATAAAA CGG-CT CATC AGTCCG CGCGCTTTTTTGGCG yaaJ 7396 - 5966 - | AGCS family, alanine/glycine transport protein talB 7665 - 8618 + | transaldolase B mogA 8729 - 9319 + | molybdenum cofactor biosynthesis protein yaaH 9942 - 9376 - | hypothetical protein TERM 6 9868 - 9854 - G 82 -5.6 -5.03314 | TCCAGGGCGAAAAAA CCGGCA TTG TGCAGG TTAAGCAGAATGGTG TERM 7 10080 - 10057 - R 72 -8.2 -3.69395 | overlap 10066 10074 TCTATGATCTAATAA GGGGGAAA AGAAAATA TTTCCCCC AGTGAGGGCATTCAC htgA 10805 - 10092 - | hypothetical protein yaaI 11245 - 10841 - | hypothetical protein TERM 8 11349 - 11361 + H 82 -2.7 -5.48163 | overlap 11350 ATTACAATTTTTCTG TGAAT AGT ATTCG TTTTTTAATTTATTT TERM 9 11899 - 11871 - g 70 -5.2 -4.37886 | gap 1, opp_overlap 11870 11871 11874, overlap 11872 11875 TCATGCCGTACAAAA TCAT-CGGCGCCG ACAA CGGCGACGCATGG CTTGATGTGAAAGGT TERM 10 12178 - 12143 - g 73 -9 -3.86015 | opp_overlap 12170 TACGGTCTGGATAAA GAGGTCGGCAACCG TACTATCG CGGTTTACGACCTC GGTGGTGGTACTTTC dnaK 11594 - 13510 + | molecular chaperone DnaK TERM 11 13532 - 13508 - f 83 -2.1 -5.63645 | opp_overlap 13514 13531, overlap 13512 GTAAAAGATAAAAAA TAATCGCCCTT TGA ACGGGTAATTA CTGGCACGGGCGAAG TERM 12 13531 - 13573 + F 80 -12.6 -3.01924 | opp_overlap 13508 13533, overlap 13539 CTTTGAACGGGTAAT TACTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATGCA TGTTAAGGGCAGATA TERM 13 13571 - 13533 - f 90 -15.2 -2.73542 | opp_overlap 13531 13539 TTGAACGGGTAATTA CTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATG CATGTTAAGGGCAGA TERM 14 13539 - 13565 + F 100 -18 -2.9518 | opp_overlap 13533, overlap 13531 GGGTAATTACTGGCA CGGGCGAAGAGG TTT CCTCTCCGCCCG TGTATGCATGTTAAG TERM 15 13677 - 13664 - g 82 -5.2 -4.98531 | GCGTGAAATCAAAAA GGCG TATAAG CGCC TGGCCATGAAATATC dnaJ 13596 - 14735 + | chaperone protein DnaJ TERM 16 14761 - 14780 + F 100 -11.4 -5.29782 | TTGTATTTTTCTTCA GCCCGGGT GTAT ATCCGGGC TTTTTTCTGCCTGTA TERM 17 15843 - 15870 + G 83 -10.6 -3.93695 | opp_overlap 15832 TTTATTCAGCCTCCG CCCGAACTGGCT TTGA AGTCAGTTCAGG TTTATGCATCCTGGA ybdO 15015 - 15962 + | LysR family transcriptional regulator SC0015 16089 - 16433 + | hypothetical protein TERM 18 16452 - 16467 + T 79 -9 -4.16146 | TCATTTGTAGTATCA GGCTCA TCCG TGAGCC TTTTACGCGTCTTTT SC0016 17027 - 16494 - | hypothetical protein SC0017 17361 - 17044 - | hypothetical protein TERM 19 17740 - 17751 + H 72 -3 -5.02502 | ACGGTGTTGTTAACC TCAT TTTT ATGA TTTTTATATCATCTA TERM 20 17758 - 17777 + H 74 -5.8 -4.55491 | overlap 17760 TTTTTATGATTTTTA TATCATCT AAAA AGATGATG TTTTGTGATTAGCTA TERM 21 18587 - 18597 + H 72 -8.2 -3.72695 | opp_overlap 18584 CGAACAATGAAGGGG CGGG CAA CCCG TTTGGTCCGGAAGAT TERM 22 20008 - 20025 + H 100 -14.1 -4.36914 | opp_overlap 20008 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG TERM 23 20025 - 20008 - H 85 -14.1 -3.09516 | opp_overlap 20008 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG TERM 24 22843 - 22860 + G 75 -6.3 -4.66163 | gap 1 AGCGCGACTTACGGC GTC-CCGA CCG TCGGCGAC TTTTTACGTAAAGAT hmt 20059 - 23055 + | putative hydroxymethyltransferase TERM 25 23094 - 23123 + F 95 -11.6 -4.25104 | CTGGACTATTAGTTT GAGATTCGAAGG CACGTT CTTTCGAATCTC TTTTCCTGCGCCCCC yaiV 23336 - 24040 + | hypothetical protein TERM 26 24212 - 24200 - f 70 -4.8 -4.44211 | GTTAATATAAAACAA CAGG TTATG CCTG GTCCTATAAAACCAA bcfA 24470 - 25012 + | fimbrial subunit TERM 27 25007 - 25025 + GF 100 -5.3 -5.69473 | overlap 25021 TTTAGCATGGTTTAT TCCTGAT TCCTT ATCGGGA TTTTTTTCTCGTCTG TERM 28 25089 - 25056 - gf 77 -8.8 -3.89346 | TTGGGAGGCGAGAAA GGGGCGTTACGCGC GTCACT GCGCGTAACAAACC GACGGCATCAGGATA TERM 29 25564 - 25547 - gf 80 -6.9 -4.57073 | overlap 25548 TATCCGCCCGAAAAA TCTGGCG GAGG CGCCAGC TCATGCCCCGTCGAC TERM 30 25563 - 25548 - gf 77 -10.4 -3.33922 | overlap 25547 ATCCGCCCGAAAAAT CTGGCG GAGG CGCCAG CTCATGCCCCGTCGA bcfB 24972 - 25799 + | fimbrial chaparone TERM 31 27560 - 27544 - f 82 -8 -4.60292 | TACAACAATAACAAA TCCGCA GGCGA TGCGGA GCGCGATCAAATTTT bcfD 28426 - 29433 + | fimbrial subunit bcfE 29434 - 29979 + | fimbrial subunit bcfF 29995 - 30513 + | fimbrial subunit TERM 32 30734 - 30712 - gf 100 -10.6 -4.8622 | opp_overlap 30716, overlap 30724 GCCTGGAACCAAAAA CGAAGGGAAT ATC ATGCCCTTCG TGGTCACGCCGCCAT bcfG 30479 - 31210 + | fimbrial chaparone TERM 33 31224 - 31243 + F 82 -11.4 -3.58533 | AACTTTTTTTCAGGC GTCTCCCG ATAG CGGGAGGC TTTCCGAACTTATCG TERM 34 31688 - 31699 + G 83 -7.2 -4.64861 | CTGATTAAGGCGAAC CCGG ATAC CCGG TTTATTTTCAAAGAG bcfH 31274 - 32119 + | hypothetical protein SC0027 32158 - 32445 + | hypothetical protein SC0028 32994 - 32545 - | hypothetical protein asl 33693 - 33953 + | putative arylsulfatase TERM 35 34172 - 34182 + G 76 -5.4 -4.82855 | TTTACAGCCCTTTAA TGTC TTT GACA TTTTTACCTTTCGTG TERM 36 34298 - 34312 + G 76 -5.6 -4.75289 | opp_overlap 34297 34299, overlap 34299 ATCAAATTCGACAAT ACGCTG TCC CAGCGG TTTTGTGTTGTAGTG SC0030 33978 - 34325 + | hypothetical protein TERM 37 35411 - 35435 + G 86 -7.2 -4.72863 | GCTGGAATGGCTATG TTATTGGCTG GACTG CAGCCTATAA TTTTAATTTATTTGG yfeN 34909 - 35673 + | hypothetical protein TERM 38 37230 - 37265 + F 85 -6.8 -5.08255 | overlap 37233 CACTTAGGGCTCTGC CCGCCTGATTCAGCGC CCTC GTGCTGAGTCAGGTTC TTTTATTTTAGGGAT TERM 39 37233 - 37262 + F 100 -15.1 -4.6313 | overlap 37230 TTAGGGCTCTGCCCG CCTGATTCAGCGC CCTC GTGCTGAGTCAGG TTCTTTTATTTTAGG TERM 40 37335 - 37323 - g 73 -9.1 -3.84961 | opp_overlap 37323 37319 CAGGTAATGATCAAA CCGAC CGG GTCGG TGTGTAATCTTGATT TERM 41 37817 - 37827 + G 74 -8.2 -3.96531 | opp_overlap 37811 37810, overlap 37809 GAGCAATATGCTGCA CCCG CAG CGGG TTTATGCGTATCTGA aslB 37290 - 38486 + | putative arylsulfatase regulatory protein SC0033 38504 - 39757 + | hypothetical protein TERM 42 40334 - 40317 - f 87 -6.9 -5.15634 | opp_overlap 40313 40317 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 43 40317 - 40334 + F 72 -9.1 -3.56704 | opp_overlap 40317, overlap 40313 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 44 40911 - 40949 + G 93 -13.3 -3.80174 | gap 1, overlap 40912 CGCTGAAAATTTTCC TGATGGCGCTGGCGATCA TCGA TGATC-TCGGCGCCATCG TTATTATCGCACTGT TERM 45 40912 - 40948 + G 86 -14.6 -2.87622 | gap 1, overlap 40911 GCTGAAAATTTTCCT GATGGCGCTGGCGATCA TCGA TGATC-TCGGCGCCATC GTTATTATCGCACTG TERM 46 41198 - 41171 - g 81 -4.1 -5.27335 | gap 1, opp_overlap 41189 41191, overlap 41173 CCGCTGAAAGAAAAA CACGGACGCTCG CCGGC CAAGCGTCTG-G AGCATGTTCTGCACC TERM 47 41197 - 41173 - g 77 -7.8 -4.27026 | opp_overlap 41189 41191, overlap 41171 GCTGAAAGAAAAACA CGGACGCTCG CCGGC CAAGCGTCTG GAGCATGTTCTGCAC nhaA 40445 - 41611 + | pH-dependent sodium/proton antiporter TERM 48 41649 - 41628 - f 70 -10.1 -2.97743 | opp_overlap 41633, overlap 41627 CAGTACGAAGGAAAG GGGGAGCGA TGTA TCGCTCCCT TGCGACATTGAACAG TERM 49 41746 - 41760 + G 74 -4.9 -4.82901 | AAGGTTCTGTCGTGG GTGCC GCAGA GGCGC TTTTTCTGACGCCGC TERM 50 42378 - 42390 + G 70 -3.3 -4.82901 | overlap 42379 AAGGCGTTTGGCGCG ACGCA CGA TGCGA TTTTTGTGGCGCCGA nhaR 41673 - 42572 + | transcriptional activator NhaR TERM 51 42588 - 42624 + T 85 -12.3 -3.33261 | opp_overlap 42590 42609, overlap 42591 ACGTACCTACCGTAA TACTTCCGGCTGCGG TATTAAC CCGCAGCCGGAATCA TTCTACAAGTTCAGC TERM 52 42622 - 42590 - T 88 -14.9 -3.06492 | opp_overlap 42588 42591, overlap 42609 GTACCTACCGTAATA CTTCCGGCTGCGG TATTAAC CCGCAGCCGGAAT CATTCTACAAGTTCA TERM 53 42591 - 42621 + T 100 -18.4 -2.83747 | opp_overlap 42590 42609, overlap 42588 TACCTACCGTAATAC TTCCGGCTGCGG TATTAAC CCGCAGCCGGAA TCATTCTACAAGTTC SC0036 44666 - 42627 - | putative glycosyl hydrolase TERM 54 46488 - 46502 + r 88 -8.5 -4.83169 | opp_overlap 46488 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT TERM 55 46502 - 46488 - R 100 -8.5 -5.64274 | opp_overlap 46488 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT rpsT 46797 - 46534 - | 30S ribosomal protein S20 yaaY 46903 - 47118 + | putative cytoplasmic protein ribF 47126 - 48064 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 56 48275 - 48257 - g 89 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCATATGCGAA TERM 57 49327 - 49304 - g 76 -3 -5.03314 | opp_overlap 49308 49324 49326, overlap 49305 49306 49308 TGCATGTCGAAAAAA TGCAGCACAG CTAT CCGTGCTGTT GGCGTCACAAAACGC ileS 48073 - 50943 + | isoleucyl-tRNA synthetase TERM 58 51307 - 51319 + G 75 -6.3 -4.65895 | GGCACGGCTTTGTTG TCGAT ATG ATCGA TTTTTACGTCGGCAA lspA 50943 - 51443 + | lipoprotein signal peptidase TERM 59 51453 - 51471 + F 70 -5.2 -4.45485 | GCATAAGCGTAAATA CCGGGTGG CGC TTATCCGG TTTTGTAGGTCTGAT slpA 51598 - 52047 + | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) ispH 52050 - 53000 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 60 53139 - 53173 + F 77 -10.2 -3.4252 | opp_overlap 53147, overlap 53147 CTTTTTGCTATTCAT CTGAAAAACCAGCA CAATCGT TGCTGGTTTTTTGG TTGTAATGCCTACAG TERM 61 53147 - 53165 + F 85 -6 -5.33848 | opp_overlap 53147, overlap 53139 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTTGGTTGTAAT TERM 62 53165 - 53147 - f 74 -6 -4.62783 | opp_overlap 53147 53139 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTTGGTTGTAAT TERM 63 54023 - 54005 - g 76 -3.1 -4.98531 | GCTGGAAAGGAAAAA CGATTGA ACTGA TCGATCG CGGTGAAAGCTACTT SC0044 53200 - 54402 + | putative nitrite reductase TERM 64 55109 - 55159 + G 89 -8.9 -4.62336 | gap 1, overlap 55112 GTAGTATGCGCACTG GCGTCCGGATGCACGATCTCTGCG CTAT CGCCTGGCTGGTGCGTCCGGA-GC TTTTTACCCTGCAAT rihC 54418 - 55338 + | ribonucleoside hydrolase RihC citB 56046 - 55360 - | putative transcription regulator sensor for citrate TERM 65 55398 - 55429 + g 79 -7.2 -4.40963 | TCTCCGGCCTGCCCA CTTTCCCGTAGCTG ATCT CCGCTTCGAGAAAG TTATTTTTCACGCCT TERM 66 55573 - 55598 + g 78 -6.8 -4.57581 | gap 1 GTTTTCATCAATTCC CCGCAG-TCCG CTATT CGGTTCTGCGG TTTGTTCTTTGGCCT TERM 67 55994 - 55974 - G 75 -6.1 -4.61527 | opp_overlap 55974 AAAACTGGGGAAAAA TCTTGATGG TGT CCACCAGGA TTTCCGCTAACATCG citA 57706 - 56048 - | putative transcription regulator, histidine kinase for citrate TERM 68 56729 - 56744 + g 73 -10.4 -3.37796 | opp_overlap 56728 56729 GCGAAAGCTAATAAC CCAGCC CTGA GGCTGG TTGTCAATAATGACC TERM 69 56795 - 56809 + g 100 -2.1 -6.12458 | TTTCATTTGGTTAAA GGTGA CGATC TCATC TTTTTTGTTTTTTTG TERM 70 57794 - 57772 - R 95 -12.1 -4.27192 | opp_overlap 57767 AAATTTGGATGAAAA TGGGATACG ACATG CGTATCCCA TCCACTATTACATCG oadB 59103 - 57802 - | putative oxalacetate decarboxylase, subunit beta TERM 71 57937 - 57989 + g 75 -3.9 -4.92757 | gap 1, overlap 57941 57942 CACTTTGTTCGATAC GCGGGCCGC-CATCGGCACCGCCG ACACGC CGGCGGAGCCAATCAGCGGGTTGA TTTTGTTCTTACTGC TERM 72 57942 - 57984 + g 71 -11.2 -2.91144 | gap 1, overlap 57941 57937 TGTTCGATACGCGGG CCGC-CATCGGCACCGCCG ACACGC CGGCGGAGCCAATCAGCGG GTTGATTTTGTTCTT oadA 60891 - 59116 - | pyruvate carboxylase subunit B TERM 73 60423 - 60455 + g 81 -14.1 -2.62184 | opp_overlap 60422 60423 GTTGCTCCGTTAAAT CCAGCCAGGTCTGCA GGG TGTGGGCCGGGCTGG TGGTGTAGGAGAGGG TERM 74 60660 - 60681 + g 85 -4.3 -5.15969 | CGCGCAGCAGCATCT GCAATGGCG TTTT CGGCATGGC TTTTTTCAGTTCGCG oag3 61149 - 60907 - | oxaloacetate decarboxylase subunit gamma TERM 75 61134 - 61108 - G 73 -5 -4.59773 | overlap 61110 61113 CCCCATCCCTAAAAA CATCAGGGTGAA ACC TTCACCCAGTAG TACAGCTTCATTCAT citN 62648 - 61308 - | putative citrate-sodium symport TERM 76 62090 - 62074 - G 72 -11.5 -3.01708 | overlap 62063 TAAATTTCAGACAGA GGCACGG CGC CCGCGCC GTTACCACCGCCCAT TERM 77 62748 - 62762 + H 79 -4.4 -5.12068 | GAATGGTTGTGCTTT TAATTA ATT TAATTA TTTTTATTAACTCTG TERM 78 63352 - 63338 - g 71 -4.2 -4.62471 | overlap 63339 GTCAACCGGGAAAAA CGATCG GCG CCATCG CCATGAACGCCAATC TERM 79 63653 - 63671 + G 73 -5.9 -4.37886 | AACATCTGGCTCCAG CGCTGGG GATTA CCCATCG TTTTGTCGGCAGTGA citC2 62893 - 63936 + | putative citrate lyase synthetase (citrate (pro-3S)-lyase ligase citD2 63966 - 64259 + | citrate lyase subunit gamma TERM 80 64776 - 64812 + G 76 -12.2 -3.03771 | gap 1 CCGAGCTGTTCTACG CCCGCTGCGCAGTGCTG CATG CGGCGC-GCGTTGCGGG TATTGCCGCCTATGA citE2 64256 - 65125 + | putative citrate lyase beta chain (acyl lyase subunit) citF2 65136 - 66656 + | putative citrate lyase alpha chain/citrate-ACP transferase citX2 66707 - 67207 + | putative cytoplasmic protein TERM 81 67523 - 67533 + G 75 -6.8 -4.4267 | opp_overlap 67519, overlap 67530 TGGTGTGAATACCCA TCGC GGG GCGA TTTTCGCTTTTGGCC TERM 82 67530 - 67540 + G 70 -6.8 -4.15565 | overlap 67523 AATACCCATCGCGGG GCGA TTT TCGC TTTTGGCCTACTGAG citG2 67185 - 68093 + | putative modifier of citrate lyase protein TERM 83 68118 - 68149 + F 83 -8.8 -4.35461 | opp_overlap 68122, overlap 68120 68122 CTTTCATTCTCTCCA GCAATGATTCATCC TGCG GGATGAATCATGTC TTTTACTGATATTGC TERM 84 68120 - 68147 + F 79 -10 -3.77413 | opp_overlap 68122, overlap 68118 68122 TTCATTCTCTCCAGC AATGATTCATCC TGCG GGATGAATCATG TCTTTTACTGATATT TERM 85 68145 - 68122 - f 81 -12.6 -3.14344 | opp_overlap 68120 68118 68122 CATTCTCTCCAGCAA TGATTCATCC TGCG GGATGAATCA TGTCTTTTACTGATA TERM 86 68122 - 68145 + F 85 -12.6 -3.45743 | opp_overlap 68122, overlap 68120 68118 CATTCTCTCCAGCAA TGATTCATCC TGCG GGATGAATCA TGTCTTTTACTGATA dapB 68273 - 69094 + | dihydrodipicolinate reductase TERM 87 69145 - 69172 + T 100 -10.8 -5.75342 | gap 1, opp_overlap 69149, overlap 69149 AAGATTAATTGATTA CAAA-GGGCAATA TAT TATTGCCCTTTTG TTTTTTTTGCCCCCC TERM 88 69167 - 69149 - T 95 -11.8 -3.99405 | opp_overlap 69149 69145 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTTTTGC TERM 89 69149 - 69167 + T 100 -11.8 -5.66926 | opp_overlap 69149, overlap 69145 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTTTTGC SC0059 69901 - 69746 - | hypothetical protein TERM 90 70885 - 70867 - g 70 -8.8 -3.6806 | AGATATGGACCGAAA CGTGGTGA TGA TCACCGCG CAGAACCACGGCTTT TERM 91 71034 - 70994 - g 83 -10.4 -3.92373 | gap 1, opp_overlap 71021 71031, overlap 71024 71025 CACCGTACCGACAAA CCGGCGTTCAGCTTCCAGG GACA CCCAGAAGC-GAGCCCCGG CCCGCACGATGCGGC carA 69959 - 71107 + | carbamoyl phosphate synthase small subunit TERM 92 71169 - 71151 - g 74 -2.2 -5.07275 | opp_overlap 71161 71163, overlap 71155 GTACAGATATAAAAA GCATCCTG ATT CTGGGCGC GGGCCCGATTGTTAT carB 71126 - 74353 + | carbamoyl phosphate synthase large subunit TERM 93 74426 - 74407 - f 79 -10.8 -3.63707 | opp_overlap 74407 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG TERM 94 74407 - 74426 + F 100 -10.8 -5.80817 | opp_overlap 74407 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG caiF 74627 - 75022 + | DNA-binding transcriptional activator CaiF caiE 75696 - 75100 - | carnitine operon protein CaiE TERM 95 75126 - 75151 + g 91 -9.7 -4.64676 | gap 1, overlap 75146 ATTTTGGCTTCACGT CCG-TCGTGCCT TTC AGGCGCGGTCGG TTTTCTTCGACCTGC TERM 96 75781 - 75737 - R 73 -10.1 -3.34517 | opp_overlap 75727, overlap 75735 75738 ATGGCGGTGTAAACA CCTTATCCGGCCTACGG TTGCGCATGTG CTGTAGGCCGGATAAGC GAAGCGCCATCCGGC TERM 97 75780 - 75738 - R 83 -13.6 -2.60496 | overlap 75737 75735 TGGCGGTGTAAACAC CTTATCCGGCCTACGG TTGCGCATGTG CTGTAGGCCGGATAAG CGAAGCGCCATCCGG caiD 76591 - 75806 - | carnitinyl-CoA dehydratase TERM 98 76500 - 76482 - G 74 -3.1 -4.84642 | CGGAAATTAAGAAAA GCTTCAC CCATT GCAAAGC TGGTTTTGGCGTCAA TERM 99 76613 - 76643 + r 81 -8.2 -4.48743 | opp_overlap 76613, overlap 76614 76615 TCTCCAGATAAATAG TTTCCCGGCGGGAG GGA TTCCTGCCGGAAGG TTTATTTCAGATTTT TERM 100 76614 - 76642 + r 71 -9.5 -3.27619 | opp_overlap 76613, overlap 76613 76615 CTCCAGATAAATAGT TTCCCGGCGGGAG GGA TTCCTGCCGGAAG GTTTATTTCAGATTT TERM 101 76615 - 76641 + r 70 -10.8 -2.55487 | opp_overlap 76613, overlap 76614 76613 TCCAGATAAATAGTT TCCCGGCGGGAG GGA TTCCTGCCGGAA GGTTTATTTCAGATT caiC 78198 - 76645 - | putative crotonobetaine/carnitine-CoA ligase TERM 102 77925 - 77945 + g 95 -11.1 -4.59773 | opp_overlap 77925 GTAAGCGGGCATTAA TCGGCACCA TAA TGGCGCCGA TTTTTGCCAGTCCAA TERM 103 77945 - 77925 - G 84 -13.3 -3.15579 | opp_overlap 77925 GTAAGCGGGCATTAA TCGGCACCA TAA TGGCGCCGA TTTTTGCCAGTCCAA TERM 104 78223 - 78259 + r 79 -9.5 -3.79519 | gap 1, opp_overlap 78218 78245 TCCACTGAAATCAGG CGTGA-GCGCTAACCG AAAAAC CGATTAGCGCATCGCG TTTAATCCTCAACTT caiB 79478 - 78261 - | crotonobetainyl-CoA:carnitine CoA-transferase TERM 105 79560 - 79521 - R 77 -10.6 -3.30243 | opp_overlap 79553 79554, overlap 79524 79526 ATGTAGGCCGGATAA GCACAGCGCCATCCGGCA TGAT TGCCTGATGGCGACGCCC CGCGTCTTATCAGGC TERM 106 79557 - 79524 - R 82 -13.1 -2.8294 | opp_overlap 79553 79554, overlap 79521 79526 TAGGCCGGATAAGCA CAGCGCCATCCGGCA TGAT TGCCTGATGGCGACG CCCCGCGTCTTATCA TERM 107 79555 - 79526 - R 78 -12.1 -2.96274 | opp_overlap 79553 79554, overlap 79524 79521 GGCCGGATAAGCACA GCGCCATCCGGCA TGAT TGCCTGATGGCGA CGCCCCGCGTCTTAT TERM 108 79554 - 79566 + r 70 -9.1 -3.30124 | opp_overlap 79526 79524 79521, overlap 79553 TGATTGCCTGATGGC GACGC CCC GCGTC TTATCAGGCCTACAA caiA 80732 - 79590 - | crotonobetainyl-CoA dehydrogenase caiT 82284 - 80767 - | L-carnitine/gamma-butyrobetaine antiporter SC0069 82512 - 82697 + | hypothetical protein fixA 82765 - 83535 + | putative electron transfer flavoprotein FixA fixB 83551 - 84492 + | putative electron transfer flavoprotein FixB TERM 109 85773 - 85755 - g 95 -5.2 -5.42259 | overlap 85757 CCATGCGTAAAAAAA TCCTGCGC CAT GCGAAGAA AGTGGGCTTCATTAA fixC 84542 - 85828 + | putative oxidoreductase FixC fixX 85825 - 86112 + | putative ferredoxin, carnitine metabolism TERM 110 86208 - 86150 - f 78 -12.2 -2.52623 | opp_overlap 86150 86159 86198, overlap 86147 TTGGCCGGATAAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGGAAACGC CTTATCCGGCCTACA TERM 111 86150 - 86208 + F 86 -14.4 -2.57931 | opp_overlap 86147 86150, overlap 86159 86198 TTGGCCGGATAAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGGAAACGC CTTATCCGGCCTACA TERM 112 86549 - 86561 + G 70 -5.5 -4.41348 | opp_overlap 86530 TATCGGCGTTATCTC CGTGG CGA CCATG TTTGTTTCCACGCCG yaaU 86259 - 87599 + | MFS family transporter ygdI 87688 - 87918 + | putative outer membrane lipoprotein SC0076 88203 - 88619 + | putative secreted protein SC0077 89132 - 88842 - | putative secreted protein cysB 89342 - 89536 + | putative inner membrane protein TERM 113 89858 - 89848 - f 73 -4 -4.80077 | CTAAAATAAAAACAA TGAA CTT TTCA TCTAAATAATTTTTC TERM 114 90058 - 90047 - g 100 -4.4 -6.13503 | GAGTAATAAAAAAAA TCTG TCCG CAGA AGAGACGGATCTTAC TERM 115 90169 - 90153 - g 72 -3.6 -4.73388 | overlap 90155 AAGGCTGATGAAAAA TGCGCC GTCAA GGCGAA ACCGGCGTGGGATAA TERM 116 91594 - 91540 - g 95 -2.8 -5.76237 | overlap 91559 GAGATAAACAAAAAA CGGTGGCGCAAATCAAGCAGGAAATA TCC CATTTGCATCCTGATTTCAGCCATCG TTCAGGGACGCGGAT SC0079 90030 - 91919 + | putative sulfatase TERM 117 92047 - 92083 + F 72 -9.3 -3.61988 | opp_overlap 92042, overlap 92042 GCTTCAACAATTACG CCTACTGGGCCAGGCTC TAA GTACCTGACCCATTAGG TTAATTTATGCGTCG TERM 118 92475 - 92453 - f 73 -2.1 -5.24129 | gap 1, opp_overlap 92465, overlap 92455 92465 CTTTGTGATAAAAAA CA-GATCATC ACAG GATAATCATG ATCCTCATTATTTAT yabF 92473 - 93003 + | glutathione-regulated potassium-efflux system ancillary protein KefF TERM 119 93957 - 93983 + G 95 -15.2 -3.38812 | opp_overlap 93965, overlap 93955 93964 GGCCGCTGGGCGTAC CGGCAAAACAGC GTC GCTGGTTTGCCG TCTTATTAGGCCAGG TERM 120 93975 - 93965 - g 70 -6.8 -4.11216 | opp_overlap 93964 93957 93955 GGCGTACCGGCAAAA CAGC GTC GCTG GTTTGCCGTCTTATT TERM 121 94100 - 94112 + G 77 -4.7 -4.93296 | overlap 94099 94101 GTCGCGCTGTCGATG GCGGC TAC GCCGA TTTTTCTGGTGCTGC kefC 92996 - 94858 + | glutathione-regulated potassium-efflux system protein KefC folA 95057 - 95536 + | dihydrofolate reductase TERM 122 95541 - 95579 + T 82 -13.3 -3.02263 | gap 2, opp_overlap 95563 95564, overlap 95556 AACGTCGTTAACGCT GTAGTGCCGGATGGCGGCG AAA CGCC-TTATCCGGC-CTAC TCTTGAGCCAGATGT apaH 96490 - 95642 - | diadenosine tetraphosphatase apaG 96878 - 96501 - | ApaG ksgA 97702 - 96881 - | dimethyladenosine transferase pdxA 98688 - 97699 - | 4-hydroxythreonine-4-phosphate dehydrogenase surA 99974 - 98688 - | peptidyl-prolyl cis-trans isomerase SurA TERM 123 99624 - 99581 - G 72 -11.2 -3.14564 | gap 1 TCATCTCTTTACGAA TCTGG-TTACGGTAGGTTGAA TAG TTCAGCCCATCGTAAGCCAGA CGGCTGCGCATCTGA imp 102388 - 100028 - | organic solvent tolerance protein TERM 124 100670 - 100654 - G 71 -5.9 -4.23674 | TTTGACCAACAGAAA CGTTAAA ACG TTCAACG GCGGCATCATCATAA TERM 125 102672 - 102698 + G 77 -8.6 -4.10161 | opp_overlap 102665 AAGATAATTGGCGTC GCCGTAGCCC TGATGAC GGGCGGCGGC TTTTGGGGCGTGGTC TERM 126 102789 - 102800 + G 77 -3.6 -5.00616 | opp_overlap 102782 GCCAACCAGCGGGAA CGGC AGGC GCTG TTTTTTGCCACCACC djlA 102642 - 103454 + | DNA-J like membrane chaperone protein rluA 104208 - 103549 - | 23S rRNA/tRNA pseudouridine synthase A TERM 127 104255 - 104243 - R 70 -9.1 -3.44051 | overlap 104246 GCGTGACGACGATAA GACGC AGC GCGTC CAGACGCCAGCCTGC hepA 107126 - 104220 - | ATP-dependent helicase HepA TERM 128 104567 - 104583 + g 75 -3.6 -4.96848 | overlap 104562 104561 104565 CAAACTCGACCTGGG CGGCCA GATTG TTGCCG TTTTTATCTAACAGC TERM 129 104687 - 104705 + g 85 -6.7 -4.85782 | gap 1 CCAGTTCGACCAGCA GCG-TGCC GACG GGCAGCGC TTTATTTTTCAACAG TERM 130 105075 - 105092 + g 70 -6.9 -4.15106 | overlap 105065 105068 105089 CAGCAGGCGGTCGCG GCCCTGT TCTA ACTGGGC TTTTAGCGCTTCATG TERM 131 105736 - 105751 + g 74 -7.5 -4.07568 | opp_overlap 105730, overlap 105730 105731 TAGAGCATATCGCGG GCGCG ATCTTC CGCGC TTTTACGCGCGCCCA polB 109651 - 107300 - | DNA polymerase II TERM 132 107503 - 107513 + g 81 -6.8 -4.71426 | ACTGCGCCGGACGAC CCTG CTT CAGG TTTTGTTCATCCGCC SC0093 110315 - 109695 - | putative secreted protein TERM 133 110179 - 110144 - G 89 -9 -4.56597 | overlap 110146 GTCTGGCCTGAAAAA CGGGAGAAGGCGTT TTTCCGCT AACGCCTGCTCCTG CGACAATCGCGCAGT TERM 134 110585 - 110604 + H 71 -3.7 -4.78981 | opp_overlap 110585 TATTTCTCGGATTAA CAAAAAA GCGATA TTTTTTG TTTGTTTTACTTAAT TERM 135 111226 - 111245 + G 95 -10.6 -4.58283 | opp_overlap 111226 GACCAGACTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA TERM 136 111245 - 111226 - g 83 -12.8 -3.20858 | opp_overlap 111226 GACCAGACTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA SC0094 110833 - 111252 + | hypothetical protein araD 111953 - 111258 - | L-ribulose-5-phosphate 4-epimerase araA 113596 - 112094 - | L-arabinose isomerase TERM 137 113048 - 113065 + gH 74 -7.7 -4.18197 | gap 1 GACTTCACGCATATT GTC-GCCG AAG CGGCAGAC TTTTAGCTGGCGGGT SC0097 113546 - 113845 + | hypothetical protein TERM 138 114676 - 114651 - fH 71 -7.6 -4.00756 | gap 2, opp_overlap 114651 GAGTTCATCAAAGAA GCTCGCGGGCGG CAGA CCGCCC-C-AGC TTTCATGCCACAGTG araC 115653 - 116498 + | DNA-binding transcriptional regulator AraC yabI 116617 - 117384 + | DedA family, membrane protein thiQ 118130 - 117423 - | thiamine transporter ATP-binding subunit thiP 119724 - 118114 - | thiamine transporter membrane protein TERM 139 118217 - 118179 - G 76 -12.5 -2.73408 | overlap 118176 ACGTAAAGCAGAGCA GCAG-CAGTATCAGCGCGG TCA CCGCGCCG-TCCTGGCTGC GGTAGGAGCCGATCT TERM 140 118343 - 118324 - G 70 -9.2 -3.67564 | opp_overlap 118311 118330, overlap 118314 118311 AAGTACGCAGGCAAA CGCCAGCG CCTG CGCCAGCG GACGTTTCAGCGCCC TERM 141 119137 - 119118 - G 77 -4.2 -4.95758 | gap 1, opp_overlap 119118, overlap 119119 119121 119122 AGCAGAGCATAAAAA TCAGCGCCG CGA CGG-GCGGA ATTTGGCGGCGCAGC tbpA 120683 - 119700 - | thiamine transporter substrate binding subunit TERM 142 120327 - 120342 + g 78 -6.8 -4.56597 | opp_overlap 120315 120327 ATAGCCGTAATCGAA CGGCAC AAAT GTGTCG TTTTTCCAGCCGCCG yabN 122519 - 120861 - | transcriptional regulator SgrR TERM 143 122346 - 122316 - G 70 -9.7 -3.32022 | overlap 122317 TCCGGTATACAGGAA CGTCAGACGCGAA CGCTT TCCGCGTCCGACC TCGGCTTCCCATGTT TERM 144 122345 - 122317 - G 78 -13.2 -2.58999 | overlap 122316 CCGGTATACAGGAAC GTCAGACGCGAA CGCTT TCCGCGTCCGAC CTCGGCTTCCCATGT leuD 122588 - 122734 + | hypothetical protein TERM 145 122796 - 122818 + F 100 -16.4 -5.95539 | opp_overlap 122793 AGCCTAAAATCACCC GCCAGCAGAT AAT ATCTGCTGGC TTTTTTTATTTCGGC TERM 146 123252 - 123240 - g 95 -6.3 -5.43866 | GAAGCGTCAAAAAAA CAGTT GAA AACTG TAGCTGCATCTGACC SC0105 123054 - 123335 + | hypothetical protein TERM 147 123385 - 123336 - T 72 -6.5 -4.25256 | opp_overlap 123341 123342 123344, overlap 123338 123340 123342 123344 123354 CTGGGATTAAAATAA GATAGATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTCGTTTTG GTATCAACGCATAAA TERM 148 123383 - 123338 - T 76 -9.1 -3.72481 | opp_overlap 123341 123342 123344, overlap 123336 123340 123342 123344 123354 GGGATTAAAATAAGA TAGATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTCGTTT TGGTATCAACGCATA TERM 149 123379 - 123340 - T 85 -12.5 -3.43405 | gap 2, opp_overlap 123341 123342 123344, overlap 123338 123336 123342 123344 123354 GATTAAAATAAGATA GATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGT--C GTTTTGGTATCAACG TERM 150 123341 - 123380 + T 100 -15.2 -4.34402 | opp_overlap 123340 123338 123336 123342 123344 123354, overlap 123342 123344 ATTAAAATAAGATAG ATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTCG TTTTGGTATCAACGC TERM 151 123342 - 123379 + T 100 -18.7 -3.2032 | opp_overlap 123340 123338 123336 123342 123344 123354, overlap 123341 123344 TTAAAATAAGATAGA TACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTC GTTTTGGTATCAACG TERM 152 123379 - 123342 - T 100 -18.7 -3.26836 | opp_overlap 123342 123341 123344, overlap 123340 123338 123336 123344 123354 TTAAAATAAGATAGA TACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTC GTTTTGGTATCAACG TERM 153 123344 - 123377 + T 100 -21.3 -3.16202 | opp_overlap 123344 123340 123342 123338 123336 123354, overlap 123342 123341 AAAATAAGATAGATA CCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGG TCGTTTTGGTATCAA TERM 154 123377 - 123344 - T 100 -21.3 -3.17888 | opp_overlap 123342 123341 123344, overlap 123340 123342 123338 123336 123354 AAAATAAGATAGATA CCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGG TCGTTTTGGTATCAA leuD 123994 - 123389 - | isopropylmalate isomerase small subunit TERM 155 123728 - 123704 - G 70 -9.2 -3.62572 | GATCACCACTTTAAA GCCGTAGTCG GTCAG CGCCCACGGC GCGTGCTCGCGTGAC leuC 125405 - 124005 - | isopropylmalate isomerase large subunit TERM 156 124457 - 124435 - G 81 -12 -3.52192 | TGTAAGCCCATATAA GCCAGCGC TTTTTCG GCGCTGGC GCGTTCAACCGGATC TERM 157 124526 - 124557 + g 74 -11.6 -3.27475 | gap 1, overlap 124525 124529 AAATCACCTGGCCCG GATTCGTGCCCCAGG TCA CCTGCGGCGCGA-TC TCTTCTGCTCGCAGG TERM 158 124529 - 124555 + g 95 -14.4 -3.20322 | overlap 124526 124525 TCACCTGGCCCGGAT TCGTGCCCCAGG TCA CCTGCGGCGCGA TCTCTTCTGCTCGCA TERM 159 124813 - 124834 + g 74 -7.9 -4.12188 | AATTCAACCACGTGT CCGGTGCCG CCGG CGCTACCGG TTTTACCGATGATCG TERM 160 124924 - 124936 + g 70 -9.1 -3.6502 | ATGGTTTTAGCGCGC CCCTG TTT CAGGG TTTGCGTCGCCAGTA leuB 126499 - 125408 - | 3-isopropylmalate dehydrogenase TERM 161 126420 - 126402 - G 74 -6.6 -4.36262 | opp_overlap 126402, overlap 126403 ATACGCATATCAAAA CGGCTGCG TAC CGCATCCA TAACTTTCAGGGCTT leuA 128070 - 126499 - | 2-isopropylmalate synthase TERM 162 126536 - 126546 + g 70 -5.4 -4.44355 | TCTTTATTTTGAGCT TTGC GTT GCAA TTCTTTTTCAACTTC TERM 163 128113 - 128140 + r 100 -14.2 -3.75629 | opp_overlap 128118, overlap 128118 TTGCGTCAGGCATAA AAAAACCCGCGC AACG GCGCGGGTTTTG TTTGACTTCGAGCTG TERM 164 128118 - 128135 + r 100 -14.1 -4.94058 | opp_overlap 128118, overlap 128113 TCAGGCATAAAAAAA CCCGCGC AACG GCGCGGG TTTTGTTTGACTTCG TERM 165 128135 - 128118 - R 100 -14.1 -5.64274 | opp_overlap 128113 128118 TCAGGCATAAAAAAA CCCGCGC AACG GCGCGGG TTTTGTTTGACTTCG leuL 128244 - 128158 - | leu operon leader peptide SC0111 128499 - 128597 + | hypothetical protein SC0112 128687 - 128830 + | hypothetical protein TERM 166 129852 - 129888 + F 100 -16.2 -4.65838 | opp_overlap 129850 129858 AAGCGATAAAACCGG GCAGAATAAATCAGAA ACAAA TTCTGGTTTATTCTGC TTTTTAGCGTATATC ilvI 130167 - 131891 + | acetolactate synthase 3 catalytic subunit ilvH 131891 - 132385 + | acetolactate synthase 3 regulatory subunit TERM 167 132509 - 132534 + F 100 -7.6 -5.75945 | CCAACAGGAATTATC GCCCAACC CAATATCACC GGTTGGGC TTTTTTTTGCGAAAT fruR 132669 - 133673 + | DNA-binding transcriptional regulator FruR yabB 134279 - 134737 + | cell division protein MraZ mraW 134742 - 135680 + | S-adenosyl-methyltransferase MraW TERM 168 135757 - 135770 + G 70 -6.7 -4.19238 | TGCCTTGCTTGGCGT GATCG GTGA CGATC TTTTGCGGTTCGGGA TERM 169 136001 - 135988 - g 81 -8.1 -4.2803 | opp_overlap 135987 135985 GATCGCAACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCCC ftsL 135677 - 136042 + | cell division protein FtsL ftsI 136058 - 137824 + | division specific transpeptidase, penicillin-binding protein 3 re TERM 170 138170 - 138134 - g 70 -7.1 -4.14739 | overlap 138136 138164 TGAGCCATCTGAAAA CATGCGTCTGGTGGCGG TGA CCGGCACCAATGGCAAG ACCACCACCACCCAA TERM 171 138938 - 138912 - g 75 -6.4 -4.57073 | opp_overlap 138920 GATGCGCTGGAAAAA GCGTTGCAGGCG GCG CGTCTGCATTGC GCCGGAAAATTGTGG murE 137811 - 139298 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murF 139295 - 140653 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 172 141584 - 141598 + G 71 -5.7 -4.2349 | opp_overlap 141584 141583 TGGGTTCCTTTAAAC TACGC GGACA GCGTA TTTTCCGTATGGCGC mraY 140647 - 141729 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 141732 - 143048 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 173 143829 - 143856 + G 77 -7.8 -4.26076 | gap 1 ATCCGTTCGGCAGCG GTTATCAGCTGAC GCA GTC-GCTGATGGC TTTTGGTCGCGGTGA ftsW 143048 - 144292 + | cell division protein FtsW murG 144289 - 145356 + | N-acetylglucosaminyl transferase TERM 174 146622 - 146597 - g 81 -3.9 -5.24129 | gap 1, overlap 146598 146599 TGGCCGGATAAAAAA CTGGTGATGCTG TTT CAGCCGCACC-G TTACACGCGCACGCG murC 145475 - 146950 + | UDP-N-acetylmuramate--L-alanine ligase TERM 175 147351 - 147336 - g 95 -5.4 -5.30348 | gap 1, opp_overlap 147336 AGCGAAGAACAAAAA GCG-CGA ATT TCGGCGC TGGGTTTACCGCTGA ddl 146943 - 147863 + | D-alanine--D-alanine ligase ftsQ 147865 - 148695 + | cell division protein FtsQ ftsA 148692 - 149954 + | cell division protein FtsA ftsZ 150015 - 151166 + | cell division protein FtsZ TERM 176 151346 - 151336 - g 82 -5.4 -5.04385 | CACACCGGCAAAAAA GTCA CCC TGAC ATTACGCCCTGCGCC TERM 177 152111 - 152101 - g 70 -6.8 -4.08216 | overlap 152108 GCAGTCCTGGCAAAA CAGG AAG CCTG GGAGTTTGTGACCTT lpxC 151267 - 152184 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 178 152209 - 152252 + F 100 -10.3 -5.90981 | opp_overlap 152208 152207 152209, overlap 152196 CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTCG TTTTTTTTACTATCC TERM 179 152252 - 152209 - f 70 -10.3 -2.52946 | opp_overlap 152196 152209, overlap 152208 152207 CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTCG TTTTTTTTACTATCC TERM 180 152320 - 152333 + F 74 -5.9 -4.64334 | opp_overlap 152320 GGTTAAATGGAAACA CGGCG CGTT CGCTG TTTTCTTAGCCGATT yacA 152463 - 152960 + | SecA regulator SecM TERM 181 152990 - 153006 + F 74 -11.5 -2.79175 | overlap 152989 TTTACTTTATTTATA GCTCCGC GGC GCGGGGC ATTTGAGACTTTATT TERM 182 153963 - 153976 + G 70 -9.5 -3.36515 | overlap 153961 CGTCACCGCCGCGCT GCGCG CGCA CGCGC TGTTTACCCGTGACG TERM 183 154138 - 154128 - g 75 -6.8 -4.50661 | opp_overlap 154129 154131, overlap 154129 154131 AATTCAGAATGAAAA CCAG ACG CTGG CGTCTATTACCTTCC secA 153022 - 155727 + | preprotein translocase subunit SecA TERM 184 155864 - 155835 - f 85 -13.7 -3.11072 | opp_overlap 155841, overlap 155841 GGCATTGAACACAGA TAAAAAGGCGCAG GCGA CTGCGCCTTTTTT ATGGATGCAACAAGA TERM 185 155841 - 155858 + F 100 -12.7 -5.28176 | opp_overlap 155841 155835 GAACACAGATAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA TERM 186 155858 - 155841 - f 100 -12.7 -5.09685 | opp_overlap 155841, overlap 155835 GAACACAGATAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA mutT 155879 - 156274 + | nucleoside triphosphate pyrophosphohydrolase akr 157297 - 156308 - | putative aldo/keto reductase TERM 187 157092 - 157070 - G 75 -6.2 -4.56597 | overlap 157072 157073 TTTCGTCGCTAAAAA TACCCGATCG CGA CGATCGGCGA TGGCTCTTCCAACTA TERM 188 157090 - 157072 - G 73 -8.8 -3.90048 | overlap 157070 157073 TCGTCGCTAAAAATA CCCGATCG CGA CGATCGGC GATGGCTCTTCCAAC TERM 189 157089 - 157073 - G 75 -12.3 -2.93708 | overlap 157072 157070 CGTCGCTAAAAATAC CCGATCG CGA CGATCGG CGATGGCTCTTCCAA lysR 157383 - 158324 + | lysR family transcriptional regulator yacG 158512 - 158321 - | zinc-binding protein TERM 190 158461 - 158435 - G 72 -3.7 -4.77165 | GCGTTTAGAACAAAA TGGGCGGAA GGGGCTAAT TTCCCCCCA GACGACCGGTTTACC yacF 159265 - 158522 - | hypothetical protein coaE 159885 - 159265 - | dephospho-CoA kinase TERM 191 159493 - 159516 + g 74 -4.5 -4.7254 | overlap 159514 CGTTTCGGGCGTCAC GTCAACCAC CAGTAC GCGGTTGGC TTTTTGATACAGCCT TERM 192 159677 - 159666 - G 74 -2.2 -5.0538 | overlap 159668 CCGGATGCGAAAAAA TACG CTCA CGCA GCGCCCGGCGACGTA TERM 193 160479 - 160448 - g 74 -2.2 -5.03314 | gap 1, opp_overlap 160457, overlap 160450 CTGATTTCGAAAAAA CCGTGCAG-ATTCTG GCG CTGAATCCTGCGCTG AACTTTGTCTGTATT guaC 160111 - 161154 + | guanosine 5'-monophosphate oxidoreductase TERM 194 161161 - 161184 + T 93 -14.6 -3.32963 | opp_overlap 161157 AGCCTCTAATATTCT GGCTGGCGTA AATG TGCGCCAGCC TTATCCCATCCCGCT hofC 162387 - 161185 - | type IV pilin biogenesis protein TERM 195 161895 - 161905 + g 74 -2.4 -5.0538 | GAATAATGACGGGAT AGCG TAG CGCC TTTTTTACGCTAACC hofB 163762 - 162377 - | hypothetical protein ppdD 164209 - 163772 - | putative major pilin subunit TERM 196 164421 - 164399 - R 100 -17 -2.91582 | CAGGTGATTTATAGA CCCGACGGCG CAG CGCCATCGGG TGGAGAGGATCAGCA nadC 165324 - 164431 - | quinolinate phosphoribosyltransferase ampD 165412 - 165975 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 165972 - 166826 + | regulatory protein AmpE TERM 197 166826 - 166849 + T 73 -9.6 -3.4252 | gap 1 TGGGGCATTAGTGTA GCGTT-GTGCC GAT GGCGCTAACGC TTATGCTGCCTACAA abf2 167868 - 166918 - | putative cytoplasmic protein yicJ 169274 - 167868 - | Na+:galactoside symporter family permease TERM 198 168151 - 168123 - G 72 -3.8 -4.82667 | gap 1, opp_overlap 168131, overlap 168124 CCAGGAGAGCAAAAA GCC-GACCATCGC CCCG GCAATCGCCAGGC CCAGTTTCAGGAAGA TERM 199 168190 - 168208 + g 74 -6.7 -4.27584 | opp_overlap 168172 168190, overlap 168172 CCGGAGAAGCTAATA CCGGTAA TGCGT TTGCCGG TTTTCCATTCGCCGT TERM 200 168366 - 168342 - G 85 -11.3 -4.03815 | opp_overlap 168341 168339, overlap 168337 168356 ATCAAAGAAATAGAA CGCGCAGGAGA AAA TCGCCAGCGCG ATATTGGTCCAGAAA TERM 201 168367 - 168356 - G 73 -5.8 -4.4648 | opp_overlap 168341 168339, overlap 168342 168337 ACGCGCAGGAGAAAA TCGC CAGC GCGA TATTGGTCCAGAAAA TERM 202 169420 - 169397 - R 100 -16 -3.51924 | CTGTGAGGCAGATAA CACCCTCCCC GGAC GGGGAGGGCG GAAAAGTAACGTCAC aroP 170811 - 169438 - | aromatic amino acid transporter TERM 203 170595 - 170579 - G 74 -7.9 -4.11484 | opp_overlap 170582, overlap 170582 GCGAAGTGGCTAAAA GAGCCGG CGA CCGGTTC TTCAACCACCATCTC pdhR 171374 - 172138 + | transcriptional regulator PdhR TERM 204 172261 - 172207 - f 74 -8.1 -3.90112 | gap 1, opp_overlap 172228, overlap 172211 172214 TGCGCGGCAACTAAA CGCAGAACCTGTCTTATTAAGCTTTC TCAC GAAAGTTTAATGGGACAGGTTCCA-G ATAACTCAACGTATT TERM 205 172258 - 172211 - f 86 -14.4 -2.70979 | opp_overlap 172228, overlap 172207 172214 CGGCAACTAAACGCA GAACCTGTCTTATTAAGCTTTC TCAC GAAAGTTTAATGGGACAGGTTC CAGATAACTCAACGT TERM 206 172255 - 172214 - f 79 -10.3 -3.49878 | opp_overlap 172228, overlap 172211 172207 CAACTAAACGCAGAA CCTGTCTTATTAAGCTTTC TCAC GAAAGTTTAATGGGACAGG TTCCAGATAACTCAA TERM 207 174413 - 174389 - g 71 -12.1 -2.50479 | overlap 174388 174385 174393 CTGAACGAAAACTAC CACATGCCGGC CAT GCCAGCAGGTG CCGAGGAAGGTATCC aceE 172298 - 174961 + | pyruvate dehydrogenase subunit E1 TERM 208 175262 - 175240 - g 70 -9 -3.69323 | GCAGCACCAGCGAAA GCGGAAGCCG CTC CGGCTGCGGC TGCTCCAGCAGCAGC TERM 209 176072 - 176062 - g 71 -8.2 -3.78775 | opp_overlap 176062 GTCTTCATCATGAAA GCGG TTG CCGC TGCTCTGGAACAGAT aceF 174976 - 176559 + | dihydrolipoamide acetyltransferase TERM 210 176568 - 176585 + F 100 -14.1 -5.88471 | opp_overlap 176568 GATGTAAGCGAAAAA GCCGGCC CAAC GGCCGGC TTTTTTTTGATAATC TERM 211 176585 - 176568 - f 100 -14.1 -4.75174 | opp_overlap 176568 GATGTAAGCGAAAAA GCCGGCC CAAC GGCCGGC TTTTTTTTGATAATC TERM 212 177542 - 177529 - g 78 -2.3 -5.16572 | ATGGAAGGCAAAAAA GCCCC GGCT GAAGC GCAGCGTTACGACGC TERM 213 177625 - 177597 - g 73 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCGGGC AAA GCTGGCGTGGAAG TTGACGACCGTGGCT lpdA 176758 - 178185 + | dihydrolipoamide dehydrogenase TERM 214 178224 - 178239 + F 100 -10.4 -5.64274 | opp_overlap 178224 ACCCGATACAAAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG TERM 215 178239 - 178224 - f 100 -10.4 -5.37043 | opp_overlap 178224 ACCCGATACAAAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG SC0154 178474 - 178758 + | putative outer membrane protein SC0155 179587 - 178796 - | putative periplasmic protein TERM 216 179076 - 179095 + g 71 -4.9 -4.67234 | opp_overlap 179089, overlap 179078 179089 ACGTCGCCTGCTTTG GTTGGCC AGTACA GGCCATC TTTTTGGCCTTCGCT TERM 217 179447 - 179460 + g 73 -5.9 -4.42765 | GTCATCGCCCAGTAG CGCGG TAAG CTGCG TTTCGTTTTTTCCGG yacH 181219 - 179600 - | hypothetical protein TERM 218 179909 - 179936 + g 70 -3.2 -4.68724 | gap 1, overlap 179911 GGATTTATTCAGTGT CTGCTG-CGCCGC CTC GCGACGACTGCTG TTTTGTGTTCCGTCA TERM 219 180559 - 180574 + g 73 -10.4 -3.39521 | opp_overlap 180559 TCGGCACGTACACCA CCTGCG GATT CGCAGG TTCAATTTTGATGAC TERM 220 182134 - 182104 - g 76 -3.3 -5.00616 | gap 1, opp_overlap 182089 CGCTGGCGGAAAAAA TCACC-GTCACCGT TTTC AAAGTGACCGGCGA AACGAATACCGACGA TERM 221 183336 - 183312 - g 71 -5.7 -4.30987 | ACCGTTGAGAAGAAA GGCAAGAAAAA CAT CTTCTCTGGCC GCATCCTGGAAATCG acnB 181608 - 184205 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 222 184233 - 184212 - T 100 -18.7 -3.09273 | opp_overlap 184227 GCGGTGTAACAGAGA CGGGCCCGG ATTT CCGGGCCCG AATGGCGCTTCTTAT yieI 184709 - 184245 - | putative inner membrane protein ptp 185442 - 185119 - | putative phosphotyrosine protein phosphatase yacL 185713 - 186075 + | hypothetical protein TERM 223 186157 - 186173 + F 100 -13.7 -5.24129 | opp_overlap 186153 TCGCCAAACATTCCA GCCGGGA GTA TCCCGGC TTTTTTATAGCAGAA TERM 224 186456 - 186444 - g 78 -6.9 -4.65895 | opp_overlap 186455 TGCCTTATTTAAAAA CGGCG CGG CACCG CTGATTGGCGCTTTT TERM 225 186988 - 187007 + G 71 -4.2 -4.56883 | ATTCTGCTCGGCGTG CTGACAAC GTTC GTTGGCGG TTTCTTTAATATTCG kdgT 186310 - 187263 + | 2-keto-3-deoxygluconate permease TERM 226 187974 - 187958 - g 84 -13.7 -3.08798 | ACTTTTTATGCAAGA CCGGCAG CGG CTGCCGG TGCTGGTGGTGGCCG ygbK 187260 - 188531 + | putative inner membrane protein pdxA 188521 - 189504 + | 4-hydroxythreonine-4-phosphate dehydrogenase 2 TERM 227 189766 - 189727 - g 100 -15 -4.90869 | overlap 189730 189731 ACCACCAATGAAAAA CAACTGCGATCGCCCGCT GAAA AACGGGCGATCGCACGCG TTGCCGCATCGCTGG TERM 228 189763 - 189730 - g 100 -17.5 -4.54681 | overlap 189727 189731 ACCAATGAAAAACAA CTGCGATCGCCCGCT GAAA AACGGGCGATCGCAC GCGTTGCCGCATCGC TERM 229 189762 - 189731 - g 100 -21 -3.31182 | overlap 189730 189727 CCAATGAAAAACAAC TGCGATCGCCCGCT GAAA AACGGGCGATCGCA CGCGTTGCCGCATCG ygbI 189514 - 190281 + | LysR family transcriptional regulator speD 191105 - 190311 - | S-adenosylmethionine decarboxylase TERM 230 191087 - 191097 + g 72 -2.4 -4.93595 | GATTGTTAAAGCCAT GCAG TTT CAGC TTTTTCAATTTTTAT speE 191986 - 191126 - | spermidine synthase TERM 231 191449 - 191428 - G 74 -2.1 -5.06414 | overlap 191429 TCTGGGCAACAAAAA TGCCGCCCG GATT CAGGCAACG CTTACAGCCTTCATA TERM 232 192068 - 192043 - R 81 -12.7 -3.16154 | opp_overlap 192046, overlap 192046 CAACATCATAGCTAA CAATGACCGTG GATG CACGGTCATTA TTTCAGCAATAGGAT TERM 233 192046 - 192065 + r 95 -12.2 -3.91716 | opp_overlap 192046 192043 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG TERM 234 192065 - 192046 - R 93 -12.2 -3.71487 | opp_overlap 192046, overlap 192043 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG yacC 192440 - 192093 - | hypothetical protein TERM 235 192693 - 192718 + G 70 -6.7 -4.07568 | CTGGGGGTTGCATCA GCGCTGCCGCT GTGG AGCCGCGCCGC TTTTGCCGCCGAACG TERM 236 193115 - 193074 - g 71 -8.5 -3.87994 | opp_overlap 193067, overlap 193076 193084 ATTCATCCGCACAAA CACGGCAAAACCGGGCGCC AGGT GGCGATGGGCCTTGCCGGG CTGGTGCTGATTGAA TERM 237 193113 - 193076 - g 71 -9.7 -3.52906 | opp_overlap 193067, overlap 193074 193084 TCATCCGCACAAACA CGGCAAAACCGGGCGCC AGGT GGCGATGGGCCTTGCCG GGCTGGTGCTGATTG TERM 238 194094 - 194082 - g 76 -10.5 -3.70811 | overlap 194076 194075 TCAGAGAACGGCAAA GCGCC AGC GGCGC ACAGAACGGGCTGGA cueO 192642 - 194252 + | multicopper oxidase TERM 239 194322 - 194303 - T 100 -15 -3.30124 | opp_overlap 194297 194303 CGCCACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG TERM 240 194303 - 194322 + T 100 -15 -3.35358 | opp_overlap 194303, overlap 194297 CGCCACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG gcd 196738 - 194330 - | glucose dehydrogenase TERM 241 195140 - 195154 + g 70 -7.1 -4.07885 | GAACGGCTGAGTTTT GGCGA CGTAA TCGCC TTTTGCCGCGCCCTG TERM 242 195160 - 195178 + g 75 -5.8 -4.56597 | CGTAATCGCCTTTTG CCGCGCCC TGC GGGACCGG TTTTTCCGGGGCGGG TERM 243 196968 - 196948 - g 71 -11.9 -2.53015 | ATACTGTTGAAGTCA TGATCCCCG AAG CGGAGATCA AAGCACGTATTGCCG hpt 196926 - 197462 + | hypoxanthine-guanine phosphoribosyltransferase yadF 198182 - 197520 - | carbonic anhydrase TERM 244 197761 - 197773 + g 73 -5.5 -4.56597 | AGCGCGTCCAGACGT TGCTC TTC GGGCA TTTTTCCCAACAGCG TERM 245 198364 - 198328 - g 100 -5.1 -5.57054 | gap 1, opp_overlap 198328 198329, overlap 198329 AACAACTTAAAAAAA CCTATCCCG-GCGGCG TTCAGG CGCTGCGCGGCATAGA TTTGCAGGTCGAAGC TERM 246 198972 - 198956 - g 76 -5.1 -4.72986 | TACCTCCATGAAAAA TCTGCTT TCA AAGCTGA AATCGGAGACGTTTA yadG 198291 - 199217 + | putative ABC-type multidrug transport system, ATPase component TERM 247 199447 - 199459 + G 76 -3.3 -5.00616 | overlap 199438 TAACTCCTACGCGAA TGTCG CGT CGTCA TTTTTTAGCGCCAAG TERM 248 199760 - 199774 + G 71 -6.4 -4.2828 | overlap 199749 CTGACGCCGCTGACC TACCTC GGC GGGGTA TTTTACTCGCTGACG yadH 199214 - 199984 + | ABC transporter membrane protein stiH 201180 - 200101 - | putative fimbriae TERM 249 200583 - 200597 + g 71 -4.9 -4.58395 | GGGGAATATTATCTC CGCTG CTGCC CGGCG TTTTTGACAAATAGA TERM 250 201076 - 201101 + g 71 -10.4 -3.17723 | opp_overlap 201071 201072 AAAGAAATTATGCGT GCCGCTGGTG GGTTGA CACCAGCCGC TTCCGTTGCCCATCG stiC 203732 - 201189 - | putativie fimbrial usher TERM 251 201354 - 201323 - G 81 -13 -3.13403 | overlap 201321 201346 GGCCGCTGAGGAAGA CCTGGCCTTTATCG CCGA CGATACTGGCCAGG TTCGCATCCTGCCCA TERM 252 201649 - 201659 + g 71 -8.2 -3.91911 | opp_overlap 201641, overlap 201644 ACCGAAACGCCGCTG GCGC CGG GCGC TTTAATTAAAATCGC TERM 253 203003 - 203031 + g 76 -12.5 -2.8294 | overlap 203002 CGGCGGTGAACTGGC TTTTCAGCGCGAT AAT GTCGCGCTGTAAA TAGTTATAAACGCTG TERM 254 203541 - 203554 + g 87 -8.1 -4.58466 | opp_overlap 203538, overlap 203538 AGTGACGTAATAGGT GCCAG GCAG CTGGC TTTTGTCGTTATCAA stiB 204442 - 203759 - | putative fimbrial chaparone TERM 255 204242 - 204230 - G 83 -10.5 -3.96148 | overlap 204211 CGGGGTGACCATAAA CGGCG CAT CGCCG CTCGCCCCTGTTTCG TERM 256 204484 - 204463 - R 95 -11.5 -4.68209 | overlap 204465 ACCTCAATAAACAAA GGGGCCAGC CGAC GCTGGCCAC CAGGATCAGTTATAT TERM 257 204482 - 204465 - R 78 -12.7 -2.63182 | overlap 204463 CTCAATAAACAAAGG GGCCAGC CGAC GCTGGCC ACCAGGATCAGTTAT stiA 205029 - 204490 - | putative fimbrial subunit TERM 258 205369 - 205355 - H 79 -2.8 -5.40072 | TGTCGGCCAAAAAAA CATGCT GAC ATCATG CAGGATTGGAGCTCA yadI 205399 - 205839 + | putative PTS enzyme TERM 259 206021 - 205993 - g 74 -10.4 -3.52909 | gap 1, overlap 205991 GCAAACGACGAAAGA TGCCGCC-ATCTG GTCG CAGATTGGCGACA AAATGGTGACCGTAG yadE 205901 - 207130 + | hypothetical protein panD 207517 - 207137 - | aspartate alpha-decarboxylase TERM 260 207580 - 207597 + r 74 -5.5 -4.59109 | overlap 207565 CTGCTTTGGAAATTC TCAGGCA GTAT TGCCCGA TTTTTAACCCCTGTC panC 208466 - 207612 - | pantoate--beta-alanine ligase TERM 261 208191 - 208214 + g 74 -6.7 -4.24711 | TTCCTCAACGGCTGG CGCAAAGAC ATAATC GACTTTGCG TTTGTTCAGCTTTTC TERM 262 208360 - 208400 + g 76 -9.8 -3.78329 | overlap 208360 ACCAGCTTCATATGG C-CGTCGTGCAGGTTGCCCA TGG TGGG-AACCAGTGCGACGCG TTTACCTTCCTGACG TERM 263 208568 - 208556 - R 70 -9.1 -3.30124 | overlap 208558 CTGTAGGCCGGATAA GACGC GTC GCGTC GCCATCCGGCACGGT panB 209383 - 208592 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase folK 209983 - 209504 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 211398 - 209980 - | poly(A) polymerase I TERM 264 210365 - 210380 + g 80 -4.6 -5.02476 | overlap 210366 TCGTAATAGGCCAGA CCGCTC TCCT GAGCGA TTTTTTGCGCCATCT TERM 265 211132 - 211147 + g 73 -5.4 -4.56597 | TGCGTTGGTAGTCAC GTCGAA ATCC TTCGGC TTTTTGCCGAGCAGG yadB 212435 - 211539 - | glutamyl-Q tRNA(Asp) synthetase TERM 266 212457 - 212474 + r 79 -12.7 -2.80935 | opp_overlap 212457 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT TERM 267 212474 - 212457 - R 95 -12.7 -4.21772 | opp_overlap 212457 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT dksA 212959 - 212504 - | DnaK transcriptional regulator DksA sfsA 213840 - 213136 - | sugar fermentation stimulation protein A TERM 268 213324 - 213281 - G 71 -4.4 -4.56597 | gap 1, overlap 213312 CGTGCGGGTGAAAAA CGTGTAATGGCGGAGTGCAGC ACC GC-GAACACCACCACTGCGCG ATGACCTGCCGCCGC TERM 269 213550 - 213567 + g 83 -9.9 -4.09321 | overlap 213535 213534 CGCCAGCGCCGGCAG GCGATTC TCCT GAATCGC TTCTTTCGTTAGCTG ligT 214387 - 213857 - | 2'-5' RNA ligase TERM 270 214525 - 214515 - g 71 -4.6 -4.61231 | opp_overlap 214515 214515 TGACAGCCCTAAAAA CCGC GCC GCAG GTTTTGTTGTCCGCG TERM 271 215073 - 215054 - g 72 -11.4 -3.14132 | opp_overlap 215064 215066 TTGCGTTTTGATGAA GCCGTCGC GATG GCGACAGC GGAACTGTTGCGCAA hrpB 214415 - 216889 + | ATP-dependent RNA helicase HrpB TERM 272 217104 - 217124 + G 70 -9.7 -3.44527 | ACAAAAGGTGAGCCG TCGTCGGCA GCA TGACGACGA TTATGATGATGACTA TERM 273 218201 - 218233 + G 71 -8.2 -3.90744 | overlap 218216 218220 218224 ATGACATGCTGAGCG CGCGTCCGCTTGGC GTACA GCCGCGCGGCGGCG TTATTTCACCGCAGC TERM 274 218540 - 218562 + G 79 -12.7 -2.87881 | opp_overlap 218555, overlap 218527 CGCGCCGTTCCATCG GGTCGCTGG CGAAA CCGGCGACC TATCTGACCGCGTTA TERM 275 219157 - 219129 - g 77 -8.2 -4.17309 | gap 1, overlap 219123 219130 GACGACAAACAACAA TGTCGATACCTGG TTTG CC-GGTATCGACG GCAGCCAGGTGACTA TERM 276 219156 - 219130 - g 76 -11.7 -3.09301 | gap 1, overlap 219123 219129 ACGACAAACAACAAT GTCGATACCTGG TTTG CC-GGTATCGAC GGCAGCCAGGTGACT mrcB 217030 - 219552 + | penicillin-binding protein 1b TERM 277 220090 - 220080 - g 74 -2.4 -5.09895 | opp_overlap 220080 CACCTATCGAAAAAA CGCC ACA GTCG GTTTCGGTGGTCACT TERM 278 220713 - 220693 - g 70 -9.7 -3.34398 | overlap 220691 CTGGCTGCCGAAAGA GGGAACGGT TGA ACCGTTACC GAATGGTAAACGCTT TERM 279 221758 - 221799 + G 86 -7.2 -4.78572 | opp_overlap 221751, overlap 221729 CGATTACACCTTCAA CGACGGTCCGTTGTCAGG TTTAAC CCTGGGAACAGGCGGTCG TTTTATTGGTTCCAG fhuA 219845 - 222034 + | ferrichrome outer membrane transporter TERM 280 222043 - 222064 + F 100 -13.7 -4.1466 | overlap 222044 TTTCTAATTTCTTTT TGGGCACGG CTTG CCGTGCCCG TTTTACAAGTTGGCT TERM 281 222044 - 222063 + F 93 -15 -3.08314 | overlap 222043 TTCTAATTTCTTTTT GGGCACGG CTTG CCGTGCCC GTTTTACAAGTTGGC fhuC 222083 - 222880 + | iron-hydroxamate transporter ATP-binding subunit TERM 282 223234 - 223216 - g 82 -11.6 -3.85698 | opp_overlap 223207 223226 CCCTCGCCGGAGAAA CTGGCGCG GAT CGCGCCGG GGCACGGGTTCGATT TERM 283 223593 - 223573 - g 71 -8.3 -3.91897 | opp_overlap 223576, overlap 223576 CTGGCGATGTATAAA GAAGCGGAT GTA ATCTGCTTC GATCACGGGAATAGC fhuD 222880 - 223770 + | iron-hydroxamate transporter substrate-binding subunit TERM 284 223807 - 223835 + G 71 -8 -3.86015 | opp_overlap 223807 223808, overlap 223797 ATGGCGGCGCGAAAA GCGCCTTATCCG ACCTA CGGTTTGGGCGC TTTGTAGGCCGGATA TERM 285 223856 - 223807 - g 83 -10.1 -4.07687 | opp_overlap 223797 223807 223843, overlap 223808 223852 223853 ATGGCGGCGCGAAAA GCGCCTTATCCGACCTACG GTTTGGGCGCTT TGTAGGCCGGATAAGGCGA AGCCGCCATCCGGCG TERM 286 223855 - 223808 - g 84 -13.6 -3.04398 | opp_overlap 223797 223807 223843, overlap 223807 223852 223853 TGGCGGCGCGAAAAG CGCCTTATCCGACCTACG GTTTGGGCGCTT TGTAGGCCGGATAAGGCG AAGCCGCCATCCGGC TERM 287 224177 - 224235 + G 73 -10.2 -3.38224 | gap 1, overlap 224177 224179 224219 GCTTTGGGCGATTCC -CGGCGCGCTGACCACGCAGTTTGCCG CCCTGA CGGGAGCCTGCATCGTCGGCGCGCTGG TGTTTGGCGTGGCGT TERM 288 224177 - 224234 + G 89 -16.2 -2.62613 | overlap 224177 224179 224219 GCTTTGGGCGATTCC CGGCGCGCTGACCACGCAGTTTGCCG CCCTGA CGGGAGCCTGCATCGTCGGCGCGCTG GTGTTTGGCGTGGCG TERM 289 224179 - 224232 + G 83 -15.2 -2.85297 | overlap 224177 224177 224219 TTTGGGCGATTCCCG GCGCGCTGACCACGCAGTTTGCCG CCCTGA CGGGAGCCTGCATCGTCGGCGCGC TGGTGTTTGGCGTGG TERM 290 224679 - 224697 + G 77 -7.3 -4.33785 | overlap 224664 GCGCGCCTGATGCTG GCGCCGC TCATT GGGGCGC TTATTTTGTGGCTAT TERM 291 224858 - 224880 + G 71 -7.6 -3.965 | opp_overlap 224846, overlap 224859 224865 224868 GAACGCCAGCGATCG TGTGGCGGCG GAA CGTCGGCACG TTCTTGCTTTTGCCG TERM 292 224901 - 224941 + G 81 -8.2 -4.25104 | gap 1, overlap 224904 224905 GCTTTTGCCGTTGCC GGTGGCGCGCTCC-TGCTG CTGG CAACATGGGGCGCGCTCTC TTTTGGTCGCGACGC TERM 293 224905 - 224937 + G 80 -12 -3.44672 | gap 1, overlap 224904 224901 TTGCCGTTGCCGGTG GCGCGCTCC-TGCTG CTGG CAACATGGGGCGCGC TCTCTTTTGGTCGCG TERM 294 225244 - 225259 + G 86 -11.8 -3.85698 | opp_overlap 225243 TGATTATTATGATAG CCGCCG GGCG CGGCGG TTTCTCACCGCAACG fhuB 223767 - 225824 + | iron-hydroxamate transporter permease subunit TERM 295 226182 - 226198 + F 93 -12.3 -3.7829 | opp_overlap 226182 226176 CTTTTTAAATATTAA GATGCGG ATG CCGCATC TTTAATGCATCTCGT TERM 296 226198 - 226182 - f 85 -12.3 -3.45571 | opp_overlap 226182, overlap 226176 CTTTTTAAATATTAA GATGCGG ATG CCGCATC TTTAATGCATCTCGT TERM 297 226285 - 226253 - f 100 -12.3 -4.4648 | opp_overlap 226259 ATTTTCATTATAAAA CTTCGATAATAAAAT ATT ATTTTTTTATCGAAG TAATAAAAAACAACT TERM 298 226259 - 226271 + F 85 -3.5 -5.61596 | opp_overlap 226253 ATTATAAAACTTCGA TAATA AAA TATTA TTTTTTTATCGAAGT stfA 226764 - 227324 + | putative fimbrial subunit TERM 299 227363 - 227331 - f 100 -15.7 -3.75629 | overlap 227333 TATCTGTAAGTGAAA TATCATCCTGCGGCA GTC TGCCGCAGGATAATG CTCAAAGTAAAAAAA TERM 300 227361 - 227333 - f 100 -18.3 -3.46068 | overlap 227331 TCTGTAAGTGAAATA TCATCCTGCGGCA GTC TGCCGCAGGATAA TGCTCAAAGTAAAAA TERM 301 229740 - 229711 - g 80 -4.3 -5.03314 | gap 1, opp_overlap 229726 229728 CTCAGCGGTAAAAAA GCCATGGC-CAG TATCCGC CTGCGCGATGGC GGCACGCCGCCCTTC stfC 227410 - 230067 + | putative fimbrial outer membrane usher stfD 230085 - 230837 + | putative periplasmic fimbrial chaperone stfE 230856 - 231368 + | putaive minor fimbrial subunit stfF 231365 - 231841 + | putative minor fimbrial subunit TERM 302 231915 - 231929 + G 71 -4.2 -4.63928 | overlap 231916 ATTGCCGGTCTCAGC GGCAGA TAA TCTGCA TTTTTCCGGTAGTCT stfG 231841 - 232371 + | putative minor fimbrial subunit; putative adhesin yadU 232371 - 233216 + | hypothetical protein TERM 303 233298 - 233271 - T 100 -9.9 -5.96521 | gap 2, opp_overlap 233270 233267 ATGAACCAAAAAAAA GCCGGGT--GGCG GCTT CGCCTTACCCGGC CTACGTTGTTTCTGG hemL 234604 - 233324 - | glutamate-1-semialdehyde aminotransferase TERM 304 233473 - 233463 - G 70 -6.8 -4.1711 | overlap 233434 ATCAGGTGGAAGAAA CGCT TAA AGCG TTCAACGTCACATGC TERM 305 234973 - 234998 + G 76 -3.3 -4.98531 | gap 1, opp_overlap 234961 234959, overlap 234962 234981 234982 ACATGCGCATTGGCG CGC-TGGTTC AGGTCGC GGACCATGCG TTTTTGCTTTGGCCG TERM 306 235009 - 235019 + G 77 -8.2 -4.13654 | ATGCGTTTTTGCTTT GGCC GCT GGCC TTTATCCTTTCGGCG yadQ 234774 - 236195 + | chloride channel protein TERM 307 236483 - 236469 - g 76 -5.6 -4.68994 | opp_overlap 236469 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGACCCGATG yadR 236232 - 236621 + | iron-sulfur cluster insertion protein ErpA yadS 237345 - 236722 - | hypothetical protein btuF 238182 - 237382 - | vitamin B12-transporter protein BtuF TERM 308 237986 - 237999 + g 70 -6.7 -4.18465 | AGATTCATTCCCTGC CAGGT AGAG ACCTG TTCTATTTTTTGCGC pfs 238873 - 238175 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 309 238917 - 238936 + H 71 -7.9 -3.85698 | GGGCATAGTTTATCA TGCGCTT ATGGGG AAGCGCA TTTCTCAGGCGGGGA TERM 310 239127 - 239112 - g 78 -2.4 -5.14563 | overlap 239113 GTTTGCAGCAAAAAA CGCAGG TTTT CCCGCT GGAGCGCAATGCCGC dgt 238958 - 240475 + | deoxyguanosinetriphosphate triphosphohydrolase htrA 240596 - 242032 + | serine endoprotease TERM 311 242037 - 242071 + F 70 -5.1 -4.52589 | opp_overlap 242036 242061, overlap 242038 242038 TGATGCAGTAATCAC CT-TTGTCCCCCTTCCG CCA TGGAAGGGGG-CAACAC TTTTCTGTGAAACCC TERM 312 242038 - 242069 + F 71 -10.2 -2.58418 | gap 1, opp_overlap 242036 242061, overlap 242037 242038 GATGCAGTAATCACC TTTGTCCCCCTTCCG CCA TGGAAGGGGG-CAAC ACTTTTCTGTGAAAC cdaR 242185 - 243342 + | carbohydrate diacid transcriptional activator CdaR yaeH 243817 - 243431 - | hypothetical protein TERM 313 244164 - 244184 + G 89 -3.1 -5.47218 | TATATGGCCTGGCAA GCGCGCTGG TAT TTGGCCCGC TTTTTTTCCCTGGCG shiA 244064 - 245365 + | putative inner membrane protein TERM 314 245389 - 245372 - T 72 -8.3 -3.75153 | opp_overlap 245372 245372, overlap 245373 TCGCCGTAATGCAAA GGGGGGC TGTC GCCCCCG CTTTTCACTCGCTTA TERM 315 245372 - 245390 + T 79 -8.1 -4.21275 | gap 1, opp_overlap 245372 245373, overlap 245372 TCGCCGTAATGCAAA G-GGGGGC TGTC GCCCCCGC TTTTCACTCGCTTAA TERM 316 245388 - 245373 - T 77 -11.8 -2.84878 | opp_overlap 245372 245372, overlap 245372 CGCCGTAATGCAAAG GGGGGC TGTC GCCCCC GCTTTTCACTCGCTT dapD 246226 - 245402 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase glnD 248928 - 246256 - | PII uridylyl-transferase TERM 317 248250 - 248267 + g 74 -6.9 -4.3467 | ACGTATGGATATCGC GCAGGCC GCCG GGGCTGC TTTTAATATCCGGCT TERM 318 248565 - 248584 + g 75 -5.7 -4.62471 | gap 1 GCTCGCCGACCTTTT GC-GCCTG TTCAT CAGGCAGC TTTTTGCGGCTTAAA TERM 319 248978 - 248948 - R 84 -7.5 -4.7497 | gap 1, opp_overlap 248958 GCCACCCATTAAAAA GCCGGATGGTGGCG TGAA CGCCTT-ATCCGGC CTACGAAGTAGTACA map 249835 - 249041 - | methionine aminopeptidase TERM 320 249785 - 249795 + g 78 -2.4 -5.15381 | overlap 249782 GGCTGCCAGACGGCC CGCG ACG CGCA TTTTTTCGATGTCTT rpsB 250286 - 251011 + | 30S ribosomal protein S2 TERM 321 251004 - 250992 - f 73 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC CGAGTAATAAGGCTT TERM 322 251185 - 251205 + F 100 -11.1 -4.89729 | overlap 251183 TATCACGTTTGGTTA GGGGGCC TGTATAT GGCCCCC TTTTTCACTTTTATA TERM 323 251441 - 251425 - g 86 -6.5 -5.03747 | AAAGCGGCGAAAAAA GCAGGCA ACG TGGCTGC TGACGGCGTAATCAA TERM 324 251480 - 251465 - g 74 -4.6 -4.72729 | opp_overlap 251465 251466, overlap 251466 TAATCAAAACCAAAA TCGACG GCAA CGTCGC TTTCATTCTGGAAGT TERM 325 251670 - 251692 + G 71 -9.8 -3.47751 | overlap 251679 CATCAACATTCGTCG CGTCGCTTCC CTG GAAGGCGACG TTCTGGGTTCTTACC tsf 251269 - 252120 + | elongation factor Ts TERM 326 252130 - 252151 + F 100 -13.7 -4.61633 | TCCTGATTTTCCTGA GGAGCCGCC TGAG GGCGGCTTC TTTTTGCGCCTCTCT TERM 327 252200 - 252174 - f 76 -8.1 -4.07568 | gap 2, overlap 252177 GCCTCTCTTGTAAAA TCAGC-C-GACGC CTG GCGTCTGCGCTGA AATGCGACGTACAAT TERM 328 252195 - 252177 - f 73 -10.2 -3.08032 | overlap 252174 TCTCTTGTAAAATCA GCCGACGC CTG GCGTCTGC GCTGAAATGCGACGT pyrH 252265 - 252990 + | uridylate kinase frr 253137 - 253694 + | ribosome recycling factor TERM 329 253694 - 253674 - f 76 -8.3 -4.14627 | opp_overlap 253674 253675 253677, overlap 253675 253677 TTGGCAGATAAAGAA GCAGAACTG ATG CAGTTCTGA TTGATCTGTACGCAG TERM 330 253693 - 253675 - f 78 -11.8 -3.08294 | opp_overlap 253674 253675 253677, overlap 253674 253677 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 331 253675 - 253693 + F 76 -11.8 -2.58999 | opp_overlap 253675 253674 253677, overlap 253674 253677 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 332 253753 - 253802 + F 100 -16.5 -5.16151 | opp_overlap 253758 253759, overlap 253754 GCGGATGAGTGGTGT ACAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTGC TTTTTATTCCGTTTC TERM 333 253754 - 253801 + F 100 -20 -3.68064 | opp_overlap 253758 253759, overlap 253753 CGGATGAGTGGTGTA CAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTG CTTTTTATTCCGTTT TERM 334 253797 - 253758 - f 95 -12.8 -3.86346 | opp_overlap 253754 253753, overlap 253759 TGAGTGGTGTACAAA GCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGT TTTGCTTTTTATTCC TERM 335 253796 - 253759 - f 93 -16.3 -2.91593 | opp_overlap 253754 253753, overlap 253758 GAGTGGTGTACAAAG CGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCG TTTTGCTTTTTATTC dxr 253894 - 255033 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 336 255101 - 255112 + F 80 -5.8 -4.95854 | overlap 255093 ATATAGTCTGCGCCA CCTG ATCG CAGG TTTTTGGCTTTTTTC TERM 337 255138 - 255155 + F 100 -8.4 -5.28176 | TTTTCGGTCAGGTTA GCCGTG GTTTTA CACGGC TTTTTTGTGGATACA TERM 338 255245 - 255209 - f 75 -11.4 -3.06162 | overlap 255230 GACGGCAGGCGAATA CGTTCCCGGCGTGCGC AGACA GCGCACGACAGGGGCG ATGACGCGCAGTCAT TERM 339 255496 - 255475 - g 73 -8.7 -3.85698 | gap 1, opp_overlap 255490, overlap 255486 GCCTTTGGGCATAAA GCCGGAGCGA AGT CCG-TCCGGC GAGCGGTCTCTTTTG uppS 255346 - 256104 + | undecaprenyl pyrophosphate synthase cdsA 256117 - 256974 + | CDP-diglyceride synthase TERM 340 257275 - 257263 - g 74 -3.3 -4.89477 | opp_overlap 257272 CCTTCAATAACAAAA CGGTG GGC CAGCG CGCCGCAATTATTGC yaeL 256986 - 258338 + | zinc metallopeptidase TERM 341 260033 - 260048 + G 80 -9 -4.12188 | opp_overlap 260032 260033 260045 AGTCGATGGGACAAT CTGCTG ATAC CAGCAG TTTTGCCGCTGATGA yaeT 258370 - 260787 + | outer membrane protein assembly factor YaeT TERM 342 261124 - 261112 - g 77 -7.7 -4.27584 | ATCTGCAATCTAAAA TGCAG CGT CTGCA ATCCATGAAAGCAGG TERM 343 261372 - 261344 - g 78 -11.8 -3.28924 | overlap 261329 261331 CACCGTTGCTTACAA CAGCAGCGATGT GAAAG ACATCACCGCTG ACGTACTGAAACAGG hlpA 260910 - 261395 + | periplasmic chaperone TERM 344 261477 - 261452 - g 81 -13.3 -2.97245 | opp_overlap 261450, overlap 261447 GGATGCAGAATTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 261399 - 262424 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 345 262453 - 262489 + G 76 -9.4 -4.02005 | gap 1, overlap 262454 AGTTGCCATTCTTTT C-CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCGTG TTATTATTGCCTTTT TERM 346 262454 - 262487 + G 85 -13.1 -3.57992 | overlap 262453 GTTGCCATTCTTTTC CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCG TGTTATTATTGCCTT fabZ 262440 - 262985 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 347 263049 - 263072 + G 72 -3.8 -4.79752 | overlap 263053 GACGGCGCTGTAATT GGCGCTAATG CCCA CATTGGTCCC TTTTGTATTGTTGGG TERM 348 263414 - 263402 - g 70 -9.1 -3.61715 | TATCCTCGCCAACAA CGCCA CGC TGGCG GGGCACGTATCAGTC lpxA 262989 - 263777 + | UDP-N-acetylglucosamine acyltransferase TERM 349 263867 - 263887 + G 71 -8.2 -3.89614 | opp_overlap 263867 263868 263881 ATTCGTGCGCTGAAA GCGCGCGT ACCCA ACGCCCGC TTTGTGGGCGTTGCG TERM 350 264323 - 264313 - g 72 -2.4 -4.84359 | opp_overlap 264318 264319, overlap 264315 GGACCCGGATAAAAA TGCG GCG CGCG ACGTGCTGGGTATCC TERM 351 264816 - 264785 - g 71 -4.4 -4.66833 | gap 1, overlap 264786 TGCGAACCGCAAAAA CTCGCC-GAAGCG CTGTTGC CGCTACTGGCGAA CGGTAAAACCAGCCA lpxB 263777 - 264925 + | lipid-A-disaccharide synthase rnhB 264922 - 265518 + | ribonuclease HII TERM 352 267290 - 267278 - g 74 -4.7 -4.82901 | GCGGCGCGAGAAAAA CGGTG AGC CGCCG CTGGATATCGCCGCC dnaE 265542 - 269024 + | DNA polymerase III subunit alpha TERM 353 269190 - 269176 - g 76 -2.8 -5.00616 | overlap 269188 GCCTGCGCGAAAAAA GCGT AGAACTG ACGC GCAAAATCTTCGCCG accA 269037 - 269996 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 354 270020 - 270040 + F 100 -16.9 -5.86061 | opp_overlap 270022 CTCATTTTTCCCCAA GAGGCCGGA TAA TCCGGCCTC TTTTTTTTGGTCGAG TERM 355 270038 - 270022 - f 85 -13.7 -3.01924 | opp_overlap 270020 CATTTTTCCCCAAGA GGCCGGA TAA TCCGGCC TCTTTTTTTTGGTCG TERM 356 270212 - 270193 - g 84 -6.4 -5.0538 | gap 1, overlap 270195 270196 TGGGATTGCAAAAAA CACTGGCGC TCA GCGCC-GTA GCGGCAGGGATCATG TERM 357 270210 - 270195 - g 70 -6.8 -4.15748 | gap 1, overlap 270193 270196 GGATTGCAAAAAACA CTGGCGC TCA GCGCC-G TAGCGGCAGGGATCA TERM 358 270305 - 270290 - g 71 -10.4 -3.25015 | GCCAATGACCATTAA CGCCAG CGAT CTGGCG GCGAAAGAGAAAGCG chi2 270177 - 271940 + | putative endochitinase TERM 359 271976 - 271950 - f 90 -10.8 -4.34263 | opp_overlap 271950 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 360 271950 - 271976 + F 100 -15.2 -3.79849 | opp_overlap 271950 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 361 272159 - 272181 + G 71 -4.9 -4.66609 | gap 1, opp_overlap 272159 272163, overlap 272163 GAAGTTTATTGAACA TAAC-CCGCG CATC TGCGGCGTTA TTTTTGACTGGGATG TERM 362 273301 - 273316 + G 84 -9 -4.25283 | opp_overlap 273294 TGATTAATCGTTCGG TGGAGC GGGC GCTCCA TTTTCGTAAAGAGGT TERM 363 273737 - 273751 + G 77 -4.2 -4.84761 | overlap 273726 GTTGCCGGATCTGTA TGCGGA AGA TCCGGA TTTTTATCGCAATAT TERM 364 274022 - 274036 + G 79 -7.8 -4.49311 | opp_overlap 274021 GATCACGCAACAGAG TCGGGC CGT GCTCGA TTTTCTGCTGATGCT ldcC 272016 - 274157 + | lysine decarboxylase 2, constitutive yaeR 274213 - 274602 + | hypothetical protein TERM 365 275654 - 275623 - g 80 -10 -3.97088 | overlap 275650 275651 CCGGACAACACGAAA CGACGGTCGCCTGG CCCG CCTGGCAAACGCCG CTGGCGCTGCCTGCC TERM 366 275837 - 275806 - g 77 -3.7 -5.04868 | gap 2, opp_overlap 275832 275834, overlap 275808 GTAAATTAAAGAAAA TCTGGCAGGAGCAGG GGAT CCCGC-CCTGGC-GA CGAGACACCACGCCG tilS 274665 - 275957 + | tRNA(Ile)-lysidine synthetase TERM 367 275967 - 276010 + T 90 -15.4 -2.71011 | opp_overlap 276009 GCCTGATGGCGCAGC GCTTATCAGGCCTGCGTATC GAAT GGAACGTAGGCCTGATAAGG TGCTTGCACCACCAT rof 276301 - 276041 - | Rho-binding antiterminator yaeP 276488 - 276288 - | hypothetical protein TERM 368 276324 - 276339 + g 86 -10.4 -4.18018 | CACCAGTAAGTTCGC GGCAGC ATAA GCTGCC TTTTCCCTGACCGAC TERM 369 276981 - 276968 - g 81 -8.1 -4.24342 | CGCCGTATTAAGAAA GCCTG TACT CAGGC GAGCGATGTCGCGCT yaeQ 276686 - 277231 + | hypothetical protein yaeJ 277228 - 277650 + | hypothetical protein TERM 370 278405 - 278385 - T 100 -16.9 -4.72497 | opp_overlap 278385 CACTCACTAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG TERM 371 278385 - 278405 + T 100 -16.9 -3.74077 | opp_overlap 278385 CACTCACTAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG proS 280171 - 278453 - | prolyl-tRNA synthetase TERM 372 278490 - 278509 + g 80 -4.2 -5.03314 | opp_overlap 278482 278490 278506 AGATAATCAACGATA TCGCCGGT TTTA ATCAGCGA TTTTTTACCGCTACG TERM 373 279314 - 279333 + g 74 -4.9 -4.77925 | AGACTTGCTGTCTTT CGCCGCT TTCACC AGCAGCG TTTTTACCGTTTTTT TERM 374 279428 - 279444 + g 74 -10.8 -3.53444 | overlap 279432 AGTCATTTCCTGCGT CGCCGC TGCGC GCGGCG TTTGCGGCGCGATAG TERM 375 280219 - 280201 - R 83 -13.2 -3.13343 | AGTTGAACGATCGAA CAGGCTCA ATG TGAGCCTG ATACAAAAAAAGTGA yaeB 280989 - 280282 - | hypothetical protein rcsF 281390 - 280986 - | outer membrane lipoprotein TERM 376 281474 - 281451 - R 88 -14.6 -3.01125 | opp_overlap 281449, overlap 281448 281454 AGCTTGCATAAATGA CAAGACGGGC AATA GCCCGTCCTG AATAATATTACAGAT TERM 377 281471 - 281454 - R 88 -12.7 -3.64915 | opp_overlap 281449, overlap 281451 281448 TTGCATAAATGACAA GACGGGC AATA GCCCGTC CTGAATAATATTACA metQ 282324 - 281509 - | DL-methionine transporter substrate-binding subunit yaeE 283016 - 282363 - | DL-methionine transporter permease subunit TERM 378 282722 - 282712 - G 83 -8.2 -4.38154 | overlap 282684 ATACGGGCGATAAAA GGCG CGG CGCC GACGGTCAGCGGTAC metN 284040 - 283009 - | DL-methionine transporter ATP-binding subunit TERM 379 283330 - 283340 + g 77 -8.2 -4.13767 | CTGAATAAACTTCTG CGCC AGC GGCG TTTTAGGATGCGAGA yaeD 284230 - 284811 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 380 284990 - 284978 - f 71 -7.7 -4.00532 | overlap 284988 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACGGTG TERM 381 287104 - 287067 - f 77 -3.4 -5.14563 | opp_overlap 287069 287097, overlap 287069 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 382 287167 - 287143 - f 71 -8 -3.93061 | gap 1, opp_overlap 287143 287150, overlap 287147 287153 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 383 287719 - 287707 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 384 287771 - 287753 - f 70 -8.8 -3.35798 | overlap 287756 ACCGTGTACGTACAA GCAGTGGG AGC CCCACCAC CAAAGCATTCTCTGG TERM 385 290846 - 290821 - f 83 -13.3 -3.18264 | opp_overlap 290823, overlap 290823 TCCGCCACTTATTAA GAGCCCTGAGC ATTA GCTCAGGGCTT TTTCTTTGCCTGTCA TERM 386 290823 - 290844 + F 100 -15.9 -5.31519 | opp_overlap 290821 290823 CGCCACTTATTAAGA GCCCTGAGC ATTA GCTCAGGGC TTTTTCTTTGCCTGT TERM 387 290844 - 290823 - f 100 -15.9 -3.1552 | opp_overlap 290823, overlap 290821 CGCCACTTATTAAGA GCCCTGAGC ATTA GCTCAGGGC TTTTTCTTTGCCTGT dkgB 290977 - 291780 + | 2,5-diketo-D-gluconate reductase B TERM 388 291816 - 291833 + T 77 -9.1 -3.97043 | TTTACCCCTCTTTCA CAGCTCC TGCG GGGGCTG TTCTTATATATTCGC yafC 292716 - 291802 - | LysR family transcriptional regulator ydhP 292821 - 293996 + | putative drug efflux protein (perhaps for chloramphenicol) TERM 389 294098 - 294079 - f 77 -9.3 -4.00486 | opp_overlap 294082 CCTATAACAGAAGAA CCAGTCC GGTTGA GGACTGG TTGACGTTACAGAGG yafD 294128 - 294928 + | hypothetical protein yafE 295006 - 295776 + | putative methyltransferase in menaquinone/biotin biosynthesis TERM 390 295781 - 295813 + T 100 -12.1 -5.14563 | opp_overlap 295787, overlap 295782 AAGCGGTATAGCAAT TTAAAAGGCGCCG GGGGAAG CGGCGCCTTTTGG TTTTTTCGTCGGACA TERM 391 295782 - 295812 + T 95 -13.4 -3.68256 | opp_overlap 295787, overlap 295781 AGCGGTATAGCAATT TAAAAGGCGCCG GGGGAAG CGGCGCCTTTTG GTTTTTTCGTCGGAC TERM 392 295807 - 295787 - T 91 -11.1 -4.31085 | opp_overlap 295782 295781 TATAGCAATTTAAAA GGCGCCG GGGGAAG CGGCGCC TTTTGGTTTTTTCGT dniR 297199 - 295832 - | membrane-bound lytic murein transglycosylase D TERM 393 296409 - 296460 + g 71 -7.2 -3.9318 | gap 1, overlap 296405 296414 296435 296458 TTTAAACGAACTCGT GCCAGCGCT-CGGCTTTCATCTGTT GTT GGCAGACGTACGCCGTAGCGTTTGC TGTTTTTGAGAATTT TERM 394 296414 - 296455 + g 70 -6.5 -4.13748 | gap 1, overlap 296405 296409 296435 ACGAACTCGTGCCAG CGCT-CGGCTTTCATCTGTT GTT GGCAGACGTACGCCGTAGCG TTTGCTGTTTTTGAG TERM 395 296435 - 296462 + g 71 -4.2 -4.64657 | gap 1, overlap 296414 296409 296458 GCTTTCATCTGTTGT TGGCAGACG-TAC GCC GTAGCGTTTGCTG TTTTTGAGAATTTCA gloB 298026 - 297271 - | hydroxyacylglutathione hydrolase TERM 396 297652 - 297640 - G 75 -6.9 -4.38154 | ACAGCCGCCAGAAAA CAGCG TGT CGCCG CAGAATAAGTAAGGG yafS 298061 - 298783 + | hypothetical protein rnhA 299247 - 298780 - | ribonuclease H dnaQ 299302 - 300042 + | DNA polymerase III subunit epsilon TERM 397 300136 - 300117 - T 71 -3.4 -4.90296 | overlap 300119 AAAAGGTGAGAAAAA GCGTTGAC GGGC GACACCGC AAACCGTAATATTCG TERM 398 300300 - 300324 + T 100 -8.6 -6.21477 | opp_overlap 300300 GTGAAGTAAAAAAAA CCGTATCACT GTAAA AGGGATACGG TTTTTTTTTCGTCTT TERM 399 300324 - 300300 - T 100 -8.6 -5.95166 | opp_overlap 300300 GTGAAGTAAAAAAAA CCGTATCACT GTAAA AGGGATACGG TTTTTTTTTCGTCTT SC0261 301629 - 300574 - | putative cytoplasmic protein TERM 400 300973 - 300962 - G 71 -4.4 -4.58395 | CGCAGGCGTGAAAAA TCTG GGGC CAGA TCGCCTAATGTCTCA SC0262 302635 - 301640 - | putative cytoplasmic protein SC0263 304515 - 302632 - | putative cytoplasmic protein SC0264 305025 - 304531 - | putative cytoplasmic protein TERM 401 304832 - 304774 - G 80 -9.4 -4.128 | gap 1, overlap 304775 ATGCTCATACATAAA GCTGCCCGCCAGCGGCGGCAGGCCATA GTTGAG CACTGAC-GCCGCCGCCTGCGGATAGC GCCGGGCGTCGATGT SC0265 305771 - 305022 - | putative cytoplasmic protein SC0266 306735 - 305833 - | putative cytoplasmic protein SC0267 306815 - 306744 - | hypothetical protein TERM 402 306818 - 306838 + H 91 -6.1 -5.4593 | TAACTGAATTCATAG GGAGTCATT ATT GATGACACC TTTTTATTATTTTCG TERM 403 306891 - 306903 + H 70 -4.9 -4.49389 | ATAGATGTCTTTTTT GAAAT ATT ATTTC TTTTAATTCTAAAAT TERM 404 308183 - 308195 + H 74 -6.9 -4.1964 | opp_overlap 308160 308179 TTGAGAAAGATCCGG CGCTG ACC CGGCG TTTTCAGGTGTTGCA TERM 405 309699 - 309673 - H 78 -6.6 -4.68593 | opp_overlap 309672 309673 GCCATGACGGAAAAA GCCGCTATCA GGCAAAT TGATATCGGC GTTAATGGTGATGAG SC0268 309841 - 310383 + | putative cytoplasmic protein sirA 310407 - 311915 + | putative cytoplasmic protein SC0270 311982 - 312368 + | hypothetical protein SC0271 312381 - 312827 + | putative cytoplasmic protein TERM 406 313446 - 313434 - g 70 -9.1 -3.71213 | opp_overlap 313445, overlap 313428 ACAGAGAAGGCGAAA TCGCG TCT CGCGA GCGGATTGAGCTCTC SC0272 313079 - 313564 + | putative cytoplasmic protein TERM 407 313575 - 313600 + F 100 -17.7 -4.71463 | TTTAACGGTTGTTTT TCCGGCCAGAT TTAC ATCTGGCCGGA TTTATTGTTTTGATT TERM 408 313972 - 313958 - g 89 -2.7 -5.47159 | GGCGAAGAGAAAAAA CTGCG TCGCC CGCTG AATGCGCAGACCACG TERM 409 314068 - 314052 - g 75 -6.5 -4.4715 | overlap 314054 GGGTAACCTACAAAA TCCCGGA AGC CCCGGAA AAAGCCTGGTACAGC SC0273 313631 - 314167 + | putative outer membrane lipoprotein SC0274 314171 - 315514 + | putative cytoplasmic protein TERM 410 315543 - 315555 + G 86 -7.7 -4.82901 | overlap 315530 GACGCCGCCAGCGGC GGACA TGA TGTCC TTTTTGTCCACCACG SC0275 315511 - 316815 + | hypothetical protein TERM 411 316914 - 316928 + G 100 -5.7 -5.56568 | opp_overlap 316914 CGACATATCACATAA CACGA TCTGT TCGTG TTTTTTTGATCATCT SC0276 316820 - 317593 + | putative inner membrane protein SC0277 317783 - 318226 + | putative shiga-like toxin A subunit TERM 412 319405 - 319373 - g 100 -13.3 -4.13945 | AGCCGCAGGCGAAAA GCGGGCGACCCGCAG GCG CTGCACGCCGCCTGC GCGCAGGAGCTGGCG TERM 413 319496 - 319485 - g 74 -7.2 -4.15833 | opp_overlap 319485, overlap 319474 319486 AGTACGACCTTAAAA GCCG CCAG CGGC TGTATACCTTCCCGC TERM 414 319713 - 319701 - g 81 -6.9 -4.82901 | opp_overlap 319709, overlap 319702 TCCGGGCGATAAAAA CCGCC CGT GGCGA ATCATCCGCCTCTCT TERM 415 320770 - 320758 - g 80 -4.8 -5.06451 | overlap 320759 GAGTACGCCAAAAAA GCTG ACTGA CAGC CTGCGCAGCCAGATA TERM 416 321278 - 321311 + G 100 -18.1 -3.14132 | CTGACCATTGCTGAT AGCGCGCTGGCGGCG GGGA CGTTGCCAGCGCGCA TTACTGCCGCAGACA TERM 417 321425 - 321412 - g 74 -9.5 -3.68023 | opp_overlap 321411, overlap 321408 AACGCGCAAAATCAA CGCCG GGAC CGGCG ATGTGCTGAACACCC TERM 418 321619 - 321587 - g 83 -10.6 -4.00042 | gap 2, overlap 321588 TTCTGGAGCAAACAA CTGGCTCCGCTGGCGG ACA CCGCCAGC-GACCC-G TGGCGCTACAAACCG SC0278 318260 - 322129 + | putative inner membrane protein SC0279 322129 - 322917 + | putative cytoplasmic protein SC0280 322914 - 323330 + | putative periplasmic protein SC0281 323354 - 323875 + | putative cytoplasmic protein TERM 419 324500 - 324466 - g 74 -10.6 -3.56092 | overlap 324467 TCAGGACTGGTGAAA GCCGCGGTAGCAGC GGCGCAG GCTGCCGCCGCCGC AGGTATGGCGCAGGA TERM 420 324502 - 324467 - g 72 -12.4 -2.73441 | overlap 324466 CAGGACTGGTGAAAG CCGCGGTAGCAGCGGC GCAG GCTGCCGCCGCCGCAG GTATGGCGCAGGATG TERM 421 325793 - 325782 - g 71 -5.8 -4.34771 | CAAAATGGATGAAAA CAGC TCCT GCTG GATACGCGTCAGCTA TERM 422 325902 - 325884 - g 73 -5.3 -4.62069 | gap 1 GGTGGATTTCAAAAA CGGC-GAT CCGG ATCTGCCG ATCATCGTGGGGCGT TERM 423 326239 - 326228 - g 72 -2.2 -4.93877 | CCGGAGGAAATAAAA CCAT TCAG ACGG TAAAAGAGTTATATC TERM 424 326435 - 326425 - g 70 -6.8 -4.09554 | opp_overlap 326422, overlap 326426 ATGAATAAAAGAGAA CCCA AAG TGGG AACATTTGGTGAGTC SC0282 324271 - 326505 + | Rhs-family protein SC0283 326517 - 327023 + | hypothetical protein TERM 425 329922 - 329893 - g 76 -12.1 -3.10344 | gap 1 GGGTGACGGAACAGA CGGAC-CCCGGCGG CAG CCGCCGGGCATACG GGTATAACGCGCTGA TERM 426 330115 - 330088 - g 71 -9.9 -3.53091 | overlap 330089 ACCGTCTGCTGGAAA TCCGCCGCA GGCGGCATGA TGCGGCGGA AGGCGGAGAGCCGGA TERM 427 330524 - 330512 - g 71 -4.7 -4.57569 | opp_overlap 330513 330521, overlap 330513 TGAGCTGCTGAAAAA GCGGC ACA GCCGG CAGGGGGTGACGGAT rhs 327039 - 331820 + | Rhs-family protein SC0285 331839 - 332147 + | hypothetical protein TERM 428 332152 - 332178 + T 85 -7.2 -4.92757 | opp_overlap 332152, overlap 332154 GTGGTCGTTAGTATA TTGGTCCGAGAG ATA TTCTCGGACCTC TTTTATTATTAATCC TERM 429 332154 - 332176 + T 100 -14.2 -4.07486 | opp_overlap 332152, overlap 332152 GGTCGTTAGTATATT GGTCCGAGAG ATA TTCTCGGACC TCTTTTATTATTAAT yjiW 332463 - 332206 - | hypothetical protein SC0287 333900 - 334367 + | hypothetical protein SC0288 334610 - 334963 + | putative cytoplasmic protein TERM 430 334981 - 334966 - T 72 -3.2 -4.9138 | AGGATTGAAATAAAA CATCTG GAGC CGGATG GATAATATGTAAAAG TERM 431 334996 - 335020 + T 75 -2.8 -5.21236 | gap 1 GGATAATATGTAAAA GCCG-GAGGGG TTAT CTTTTCCCGGC TTTTTATTATCAATT SC0289 335344 - 335030 - | putative cytoplasmic protein TERM 432 335478 - 335493 + r 77 -9 -3.85698 | ACTGTTAAAGATGTC TACCGG GAGG CCGGTA TTTCTGAAGCCACCA SC0290 335617 - 335477 - | hypothetical protein SC0291 335820 - 336101 + | integrase core subunit safA 336851 - 337363 + | putative outer membrane protein safB 337447 - 338184 + | putative fimbriae assembly chaparone safC 338208 - 340718 + | putative fimbriae usher TERM 433 340984 - 340970 - g 74 -7 -4.3129 | GAGCGATGAGCAAAA GGCGGG TAA CACGCC TACCGTATTGCTGCT safD 340740 - 341210 + | putative fimbriae subunit TERM 434 341476 - 341492 + F 78 -12.3 -2.66034 | CACTCTTTTGTGAGC GGGGCTT TAT AAGCCCC TGGTATAAGGTTTGT ybeJ 341618 - 342439 + | putative xylanase/chitin deacetylase sinR 343256 - 344203 + | transcriptional regulator SC0298 344487 - 344236 - | hypothetical protein TERM 435 344278 - 344298 + g 74 -7.6 -4.11216 | gap 1, opp_overlap 344265 344261, overlap 344279 GAGGCATCGAGATAT G-CGACTGG TCAG CCAGTCGTC TTTTGACGATGCCCA TERM 436 344279 - 344296 + g 79 -11.3 -3.65542 | opp_overlap 344265 344261, overlap 344278 AGGCATCGAGATATG CGACTGG TCAG CCAGTCG TCTTTTGACGATGCC TERM 437 344604 - 344619 + r 77 -9 -3.85698 | ACTGTTAAAGATGTC TACCGG GAGG CCGGTA TTTCTGAAGCCACCA istB 345128 - 344862 - | hypothetical protein TERM 438 345173 - 345215 + H 70 -4.7 -4.4009 | gap 1, opp_overlap 345166, overlap 345177 AACAACACCCGATGG CCCACATCTGCCGCTTTCAC ACCG GGGGCAGCGGCC-AGGTGGG TTTTCTCCACTCCGG TERM 439 345935 - 345949 + H 72 -5.6 -4.51765 | overlap 345936 AGTCTGAATTGTATC TCCCTC CTG GAGGGC TTTCTTTAGATTCTC TERM 440 345936 - 345948 + H 70 -9.1 -3.29975 | overlap 345935 GTCTGAATTGTATCT CCCTC CTG GAGGG CTTTCTTTAGATTCT tcfA 346343 - 347053 + | putative fimbrial protein TERM 441 347071 - 347057 - f 76 -4.2 -4.98531 | GCCGGAAAGTAAAAA CACACG GAG CGTACG CTATACCCTACATTT TERM 442 347192 - 347209 + G 81 -6.9 -4.80417 | overlap 347194 CTTTTATTGCCGCAG CTGTGGC ATTG GCCACCG TTTATTCTTTTTCTG tcfB 347104 - 347679 + | putative fimbrial subunit TERM 443 349629 - 349646 + F 70 -9.9 -2.94925 | overlap 349631 ATGTGAACCATGTGA GATCCTG GCAG CAGGATC TGTATCGTGAACTGT TERM 444 350871 - 350859 - g 74 -7.7 -4.20516 | GTTTCAGGGAACAAA TCAGC CAT GCTGA AACCACGCTTATACT tcfD 350498 - 351043 + | putative fimbrail protein tcfD 351028 - 351588 + | putative fimbrail protein tinR 351703 - 352176 + | transcriptional regulator TERM 445 352874 - 352887 + G 93 -4.5 -5.63517 | overlap 352875 GGAATGCAATGGCCA TCGTC ATAT GACGG TTTTTTCTTTCGGGA TioA 352316 - 352933 + | hypothetical protein TERM 446 353520 - 353541 + T 71 -10.1 -3.21099 | overlap 353521 TGTGCATTGACATCC TCCACGTCC TGAA GGGCGTGGG TTCCTGCTCCAACGG TERM 447 353521 - 353540 + T 73 -11.4 -2.52516 | overlap 353520 GTGCATTGACATCCT CCACGTCC TGAA GGGCGTGG GTTCCTGCTCCAACG SC0306 353851 - 353699 - | hypothetical protein sapA 354616 - 353897 - | sapA-like protein TERM 448 353973 - 353987 + g 76 -2.8 -5.07053 | TAAGCGGTATGTTCA TCACCA GCA TAGTGA TTTTTTGAAATGCTT TERM 449 354953 - 354930 - R 95 -11.8 -3.85698 | CCTGTCCTGGATAAA GCCCGTTATC CAGG AATAACGGGC AAAAATATTTACTCA virG 355369 - 354962 - | hypothetical protein TERM 450 355677 - 355650 - R 79 -9.9 -3.66999 | gap 1, opp_overlap 355654, overlap 355653 355654 AGTTACGGAGTGAAA CAATCCCGCCGC GCTGA GCGGCAGG-TTG CTTACAAGGTGAATG TERM 451 355675 - 355653 - R 74 -8.3 -3.9693 | opp_overlap 355654, overlap 355650 355654 TACGGAGTGAAACAA TCCCGCCGC GCTGA GCGGCAGGT TGCTTACAAGGTGAA TERM 452 355674 - 355654 - R 78 -11.8 -2.97676 | opp_overlap 355654, overlap 355653 355650 ACGGAGTGAAACAAT CCCGCCGC GCTGA GCGGCAGG TTGCTTACAAGGTGA TERM 453 355654 - 355674 + r 73 -9.6 -3.34344 | opp_overlap 355653 355650 355654 ACGGAGTGAAACAAT CCCGCCGC GCTGA GCGGCAGG TTGCTTACAAGGTGA yafV 356446 - 355679 - | hypothetical protein TERM 454 356535 - 356518 - R 100 -14.1 -5.08088 | AAGCGGCAAGAAAAA GCCCCGC GAAA GCGGGGC AGGAAAGACGCGAGA fadE 358999 - 356555 - | acyl-CoA dehydrogenase TERM 455 358248 - 358228 - G 70 -8.9 -3.64822 | ATTCGCCCATGCAAA CCACGCCGG TAT CCGGAATGG CGCCTGCATCAGAAC TERM 456 358816 - 358786 - G 81 -12.6 -3.03159 | overlap 358775 GGAAGCCGCGGAACA CCGGTGCGGAAATC ATT GATTTTCGCATCGG TGTGAGGTTAAACGG gmhA 359239 - 359817 + | phosphoheptose isomerase TERM 457 359866 - 359899 + F 72 -8.1 -3.794 | opp_overlap 359867, overlap 359867 TGGTTGCGCTCAGAA ACCCCAGTCACATAG TTAT CTATGTTCCTGGGGA TTTCCTCCCTTACCG TERM 458 359867 - 359898 + F 77 -11.6 -2.87319 | opp_overlap 359867, overlap 359866 GGTTGCGCTCAGAAA CCCCAGTCACATAG TTAT CTATGTTCCTGGGG ATTTCCTCCCTTACC TERM 459 359898 - 359867 - f 95 -11.6 -3.85698 | opp_overlap 359867 359866 GGTTGCGCTCAGAAA CCCCAGTCACATAG TTAT CTATGTTCCTGGGG ATTTCCTCCCTTACC TERM 460 360757 - 360736 - g 73 -8.7 -3.91798 | TAACGGGGAATGAAA CCTGGCAAA AGAT TATGCCAGG CGAATGGGCGTTATT yafJ 360030 - 360797 + | hypothetical protein yafK 361391 - 360768 - | hypothetical protein TERM 461 361504 - 361491 - H 85 -3.8 -5.46657 | opp_overlap 361478, overlap 361478 CATCGCAAGAAAAAA TGCG ATTTTA CGCA TACTGCTTGTTCCTT dinP 361755 - 362810 + | DNA polymerase IV TERM 462 363180 - 363205 + G 75 -3.9 -4.85599 | gap 1 CAGATCTGCATCCGG GGC-GCGGCTAT CCT ATTGGCGCAGCC TTTTTCTCGCGTGGA ykfJ 363029 - 364168 + | hypothetical protein TERM 463 364580 - 364544 - g 91 -9.5 -4.66318 | AGCACGTTAATAAAA CCGACTCGGCA-GTGCG GGCCA CGCACCTGGCGAG-CGG GATTAGCGTGAAGGT prfH 364165 - 364779 + | peptide chain release factor-like protein TERM 464 364896 - 364921 + T 79 -8.9 -4.18763 | overlap 364897 ATATTCCATATTGAT AGCCCGTACCA GAAA TGGGACGGGCA TTTTAGCGCTTTCTT TERM 465 364897 - 364920 + T 80 -12.4 -3.10173 | overlap 364896 TATTCCATATTGATA GCCCGTACCA GAAA TGGGACGGGC ATTTTAGCGCTTTCT pepD 366392 - 364935 - | aminoacyl-histidine dipeptidase (peptidase D) TERM 466 366116 - 366141 + g 81 -2.5 -5.40072 | GCTGGATAGGATCTG TAGTGAAGTCG TGAA CGGTGTCGCTA TTTTTTTGCGGCACC TERM 467 366373 - 366350 - G 83 -7.6 -4.57837 | gap 1 AGATTTTGGCAAAAA TATC-CCACAA AGG TTGTGGTGATA ACTGAGACAGTTCAG TERM 468 366986 - 367004 + G 73 -10.2 -3.33003 | opp_overlap 366986, overlap 366978 ACGATTTTCGCTAAA CCGGCGGG CCG TCCGCTGG TTGATGATTATGTTA gpt 366641 - 367099 + | xanthine-guanine phosphoribosyltransferase TERM 469 367114 - 367138 + F 100 -17.1 -4.78572 | overlap 367116 ATCAGCAGCTTTTCA GAGCGCCCGGC AAT GCCGGGCGCTG TTTTATTGGTTACAA TERM 470 367116 - 367136 + F 100 -19.7 -4.00694 | overlap 367114 CAGCAGCTTTTCAGA GCGCCCGGC AAT GCCGGGCGC TGTTTTATTGGTTAC TERM 471 367706 - 367736 + G 70 -3 -4.70659 | overlap 367707 ACGTGAAATGGAATT TGCCGTTCCTGGCG GTT CGCCTGTCACCGCG TTTTTACATATGCCG frsA 367188 - 368432 + | fermentation/respiration switch protein crl 368490 - 368891 + | DNA-binding transcriptional regulator Crl phoE 369994 - 368942 - | outer membrane phosphoporin protein E TERM 472 370528 - 370545 + G 71 -6.3 -4.35926 | CAAAGCCGTCTGATT CAACTGT GGGA GCAGTTG TTTTCAATTTACGGT proB 370276 - 371379 + | gamma-glutamyl kinase proA 371391 - 372641 + | gamma-glutamyl phosphate reductase int 374010 - 372847 - | hypothetical protein eac 374875 - 374240 - | EaC protein TERM 473 374909 - 374896 - R 88 -5.9 -5.45652 | ATCTCCAATAAAAAA CCCGC CGTA GCGAG TTCAGATAAAAGAAA TERM 474 374942 - 374925 - R 93 -9.1 -4.83243 | opp_overlap 374925 TTCAGATAAAAGAAA TCCCCGC GAGC GCGAGGA TTGTTATTGCTGCGG eaa 376121 - 374946 - | Eaa protein SC0327 376579 - 376118 - | hypothetical protein SC0328 377097 - 376576 - | hypothetical protein SC0329 377327 - 377094 - | hypothetical protein eae 377701 - 377324 - | Eae protein exoD 379357 - 378809 - | endodeoxyribonuclease ssb 379872 - 379366 - | ssDNA-binding protein controls activity of RecBCD nuclease SC0333 380580 - 379873 - | hypothetical protein TERM 475 380722 - 380710 - R 72 -6.3 -4.30576 | TCTTCATCATCAAAA TCATG CAA CATGA CGCGCCTCCCATTCT kil 380898 - 380710 - | host septation inhibitor rpc 381052 - 380879 - | C3-like protein TERM 476 381041 - 381051 + g 100 -5.4 -5.47159 | AGCAAATGTCATCGT TGGA TTC TCCA TTTTTATTTATTGGC TERM 477 381133 - 381113 - R 88 -7.5 -5.07567 | GGATATGCGAAAAAA GCCGCCC TGACTGC GAGCGGC AAATAACATCAAGGG SC0336 381444 - 381244 - | hypothetical protein SC0337 381770 - 381513 - | 43L-like protein TERM 478 382163 - 382151 - R 90 -6.9 -5.4505 | TTTGGCAATAAAAAA GCCGC ATT GCGAC CTGATTAGATGAGAG regN 382501 - 382199 - | antitermination protein TERM 479 382843 - 382830 - H 100 -8.1 -5.64274 | opp_overlap 382830 382829 TGAGGCACAAAAAAA CCGAC TTTC GTCGG CTTTAGTGTTGGAGT TERM 480 382902 - 382916 + H 72 -2.8 -5.07275 | overlap 382903 AGATTCTGTGCTCGA CCATAG TTC CTATGA TTTTTATGTCTCTAC TERM 481 383216 - 383228 + H 74 -6.9 -4.21194 | opp_overlap 383216 AAACTCCCATCAAAA GCCTC AAT GGGGC TTTTACATGCTAGAG cro 383603 - 383818 + | regulatory protein Cro (antirepressor) TERM 482 383823 - 383810 - f 74 -3.8 -4.93079 | AAGAAAAGAAACAAA GCAG CTTAGT CTGC ACCGCTCTTTACCAA TERM 483 384189 - 384170 - f 100 -9.2 -5.72622 | opp_overlap 384170 CCGAGAAATAAAAAA CGCCCGGC GGCA ACCGAGCG TTCTGACCAAATCCA TERM 484 384324 - 384352 + F 78 -12.5 -2.61144 | opp_overlap 384327 384330, overlap 384327 384330 GGTAGCCGCAGCAAA TAACAGGGCGTTC GCA GAGCGCCTTGTTG GTGTTTACAGACTAG TERM 485 384349 - 384327 - f 71 -7.6 -4.0031 | opp_overlap 384324 384327 384330, overlap 384330 AGCCGCAGCAAATAA CAGGGCGTTC GCA GAGCGCCTTG TTGGTGTTTACAGAC TERM 486 384327 - 384349 + F 82 -12 -3.45571 | opp_overlap 384327 384330, overlap 384324 384330 AGCCGCAGCAAATAA CAGGGCGTTC GCA GAGCGCCTTG TTGGTGTTTACAGAC TERM 487 384330 - 384346 + F 80 -10.1 -3.8613 | opp_overlap 384330 384327, overlap 384327 384324 CGCAGCAAATAACAG GGCGTTC GCA GAGCGCC TTGTTGGTGTTTACA TERM 488 384755 - 384739 - g 86 -10.9 -4.09685 | overlap 384723 GCGCATCCCTCAAAA TGAGGGA ATA TCCCTCA AAACAGGGGATAAAA TERM 489 384802 - 384759 - g 80 -9 -4.11371 | gap 1, opp_overlap 384762 384771 384773, overlap 384761 384762 384771 384773 GAATATCCCTCAAAA CAGGGGATAAAACATCCCTCA ATT TGAGGGA-GTGTTATCCCTCA AAACAGGGGGACACA TERM 490 384800 - 384761 - g 79 -11.6 -3.64984 | gap 1, opp_overlap 384762 384771 384773, overlap 384759 384762 384771 384773 ATATCCCTCAAAACA GGGGATAAAACATCCCTCA ATT TGAGGGA-GTGTTATCCCT CAAAACAGGGGGACA TERM 491 384799 - 384762 - g 83 -15.1 -2.78508 | gap 1, opp_overlap 384762 384771 384773, overlap 384761 384759 384771 384773 TATCCCTCAAAACAG GGGATAAAACATCCCTCA ATT TGAGGGA-GTGTTATCCC TCAAAACAGGGGGAC TERM 492 384792 - 384771 - g 83 -8.1 -4.43221 | gap 1, opp_overlap 384762 384771 384773, overlap 384762 384761 384759 384773 AAACAGGGGATAAAA CA-TCCCTCA ATT TGAGGGAGTG TTATCCCTCAAAACA TERM 493 384789 - 384773 - g 80 -10.9 -3.81279 | opp_overlap 384762 384771 384773, overlap 384771 384762 384761 384759 ACAGGGGATAAAACA TCCCTCA ATT TGAGGGA GTGTTATCCCTCAAA TERM 494 384885 - 384856 - g 81 -3.5 -5.18995 | overlap 384859 384861 AATACAAGATAAAAA CATTATGTCCGAA AGCG TTCGGACGGAGTG TGAAAAATCATCTGG rpo 384386 - 385234 + | replication protein O SC0341 385342 - 387222 + | hypothetical protein TERM 495 387406 - 387417 + F 79 -4.4 -5.13521 | GGATTTTATGATGAG CAGT GGAA ACTG TTTTTTGAATCATTT TERM 496 387528 - 387549 + F 100 -8.7 -5.27335 | gap 1, opp_overlap 387526 387528 ACTGAGTTAATAACA GGCCTGCTGG TAA TC-GCAGGCC TTTTTATTTGGGGGA TERM 497 388325 - 388312 - g 70 -5.3 -4.45117 | GATATGGTAAAGAAA TATGG CACT CCATA CGTCGGCGGCGCGTT nin 388012 - 388884 + | phosphoadenosine phosphosulfate reductase family protein stx 389278 - 388943 - | hypothetical protein rusA 389632 - 390027 + | endodeoxyribonuclease RUS ninZ 390208 - 390387 + | NinZ SC0346 390384 - 390902 + | gp23-like protein TERM 498 390920 - 390954 + TF 93 -6.5 -5.65927 | gap 1, overlap 390915 ATAATTAGAGGGTAA GCTGCCGTTAGTGACT CTTA AGTTGC-AACGGTGGC TTTTTTATTTGGGTC SC0348 391683 - 391561 - | hypothetical protein SC0347 391363 - 391686 + | holin-like protein lycV 391670 - 392146 + | lysin enpP 392143 - 392580 + | Rz lysis protein TERM 499 392613 - 392629 + F 100 -11.5 -5.50499 | opp_overlap 392593 392610 392613 AAGTCCATTTAATGA GCCTCGC GAT GCGGGGC TTTTTTTACATCTGA SC0352 392786 - 393274 + | hypothetical protein SC0353 393765 - 394007 + | hypothetical protein SC0354 394509 - 396008 + | gp2-like protein SC0355 396009 - 398174 + | putative packaging glycoprotein TERM 500 398871 - 398852 - g 83 -8.6 -4.4017 | gap 1, overlap 398854 CTAATCCTGAGAAAA CA-CGCCAG TTG CTGGCGATG GACGGGCAATCCGCG TERM 501 398868 - 398854 - g 82 -11.4 -3.80535 | overlap 398852 AATCCTGAGAAAACA CGCCAG TTG CTGGCG ATGGACGGGCAATCC SC0356 398188 - 399099 + | scaffolding protein SC0357 399099 - 400394 + | coat protein TERM 502 400418 - 400403 - f 73 -10.4 -2.96274 | opp_overlap 400398 400403 TGCGTGATAACCAGA GGGAGC TTCT GCTCCC TTTTTTATCTGGAGA TERM 503 400403 - 400418 + F 100 -10.4 -5.36441 | opp_overlap 400403, overlap 400398 TGCGTGATAACCAGA GGGAGC TTCT GCTCCC TTTTTTATCTGGAGA SC0358 400653 - 401153 + | DNA stabilization protein SC0359 401154 - 402572 + | DNA stabilization protein SC0360 402576 - 403214 + | packaged DNA stabilization protein gp26 SC0361 403214 - 403669 + | hypothetical protein TERM 504 403843 - 403812 - g 70 -6.6 -4.13014 | CGCAGACCTGCAAAA CCAACAATTCAATC GTGT GATGGAACAGTTGG CACCTTACGCCGCCG SC0362 403672 - 404361 + | DNA transfer protein gp7 precursor SC0363 404404 - 405723 + | DNA transfer protein gp20 TERM 505 406296 - 406306 + G 70 -6.8 -4.11404 | GCCATCAACCTTGGC GCTC AGG GAGC TTTATCTGCTGTAGC TERM 506 407241 - 407227 - g 82 -5.6 -5.02476 | opp_overlap 407226 AGATTGCTGAAAAAA CTGGCG ATT CTCCAG CTAAGTTCATAACCG SC0364 405723 - 407636 + | TPA: injection protein SC0366 407983 - 407654 - | hypothetical protein TERM 507 407691 - 407710 + g 79 -7.2 -4.39426 | overlap 407693 GCTGCAATTATTCCT TTTCCTGA TGTT TCAGGAGA TTTTGTAGCCATATA TERM 508 408143 - 408158 + H 85 -6.1 -5.24129 | opp_overlap 408143 TAACCAATGCAACGA CCCAG CTCAGT CTGGG TTTTTTATGCCCAAA SC0367 408223 - 409983 + | hypothetical protein TERM 509 410044 - 410023 - T 90 -13.7 -3.31501 | opp_overlap 410023 ATTAATTGTGTACAA TGCCCCCAC TATA GCGGGGGCA TATATGGCTTTACTA TERM 510 410023 - 410044 + T 75 -11.5 -2.98802 | opp_overlap 410023 ATTAATTGTGTACAA TGCCCCCAC TATA GCGGGGGCA TATATGGCTTTACTA TERM 511 410254 - 410241 - T 71 -9.5 -3.29364 | opp_overlap 410241 ATGACGAATGATTAA GGCGC TTTC GCGCC TTTTTTACTGGATAG TERM 512 410241 - 410254 + T 100 -9.5 -5.1675 | opp_overlap 410241 ATGACGAATGATTAA GGCGC TTTC GCGCC TTTTTTACTGGATAG SC0368 411713 - 410259 - | hypothetical protein TERM 513 410635 - 410615 - G 83 -7.7 -4.56597 | CGCTTGGGGCAAAAA CAACAATCA ATA TAATTGTTG AAGCAAATGCAAAGA gtrB 412629 - 411703 - | bactoprenol glucosyl transferase gtrA 412997 - 412629 - | bactoprenol-linked glucose translocase insF 414535 - 413672 - | putative IS3 transposase yoaC 415277 - 415600 + | putative cytoplasmic protein TERM 514 415716 - 415742 + F 77 -11.2 -3.22884 | opp_overlap 415713 TCGTCAAATTAATGT CTATATATTTAT TGA ATAAATATATAG TTCATAACTTACTAC ynfM 415842 - 417179 + | putative permease TERM 515 417187 - 417197 + F 72 -3.2 -5.04325 | GTTTCTGATTATAGA CACG AAG TGTG TTTTTATACTTTCCA TERM 516 417466 - 417484 + G 82 -5.3 -5.12971 | gap 1, opp_overlap 417452 AGAACGCGGTCGCGC CGT-TCGG CACC CCGACACG TTTTTATTGAATATT TERM 517 418318 - 418344 + G 70 -3.1 -4.80178 | gap 1, opp_overlap 418325 AACGGCTGGCATGTT GC-TGAAAGATA TTCG TATCTCTCACGC TTTTATTGGTTCATG ledL 417311 - 418732 + | isopropylmalate isomerase large subunit ledS 418734 - 419360 + | putative 3-isopropylmalate isomerase (dehydratase), subunit with LeuC TERM 518 419903 - 419890 - g 74 -2.3 -5.0133 | TACGGCTGGAAAAAA CTGGC CTTC GACAG GATCATTCGGTCCGT faaH 419375 - 420253 + | putative fumarylacetoacetate (FAA) hydrolase deh 420253 - 421167 + | putative hydrolase or acyltransferase TERM 519 421256 - 421228 - g 100 -5.1 -5.52384 | opp_overlap 421231 421232 421243 421253, overlap 421230 421231 421232 CCTGTAGGAAAAAAA CATCGCCAGCCCC TTG AGGGCTGGCCTTC TGTTGAAGATCTTTT TERM 520 421254 - 421230 - g 79 -7.7 -4.40552 | opp_overlap 421231 421232 421243 421253, overlap 421228 421231 421232 TGTAGGAAAAAAACA TCGCCAGCCCC TTG AGGGCTGGCCT TCTGTTGAAGATCTT TERM 521 421253 - 421231 - g 74 -11.2 -3.23247 | opp_overlap 421231 421232 421243, overlap 421230 421228 421232 GTAGGAAAAAAACAT CGCCAGCCCC TTG AGGGCTGGCC TTCTGTTGAAGATCT TERM 522 421231 - 421253 + G 76 -10.5 -3.67052 | opp_overlap 421230 421228 421231 421232, overlap 421232 421243 GTAGGAAAAAAACAT CGCCAGCCC CTTGA GGGCTGGCC TTCTGTTGAAGATCT TERM 523 421252 - 421232 - g 83 -14.7 -2.52863 | opp_overlap 421232 421231 421243, overlap 421231 421230 421228 TAGGAAAAAAACATC GCCAGCCCC TTG AGGGCTGGC CTTCTGTTGAAGATC TERM 524 421232 - 421252 + G 83 -14 -2.79749 | opp_overlap 421231 421230 421228 421232, overlap 421231 421243 TAGGAAAAAAACATC GCCAGCCC CTTGA GGGCTGGC CTTCTGTTGAAGATC ygiP 421201 - 422166 + | LysR family transcriptional regulator TERM 525 422860 - 422848 - f 71 -3.5 -4.83032 | opp_overlap 422848 AGATGAAATAGAAAA TTAAT ATT ATTAA TTAAATGAATATGAA SC0379 423074 - 423472 + | putative outer membrane protein TERM 526 423484 - 423509 + T 77 -10.5 -3.38046 | overlap 423481 423485 CTGAGTCTGGCTTGC CTCAGGGATAC GATC GTATCCCTGAA TATTTCCCATCAAAA TERM 527 423485 - 423508 + T 83 -14 -2.62613 | overlap 423484 423481 TGAGTCTGGCTTGCC TCAGGGATAC GATC GTATCCCTGA ATATTTCCCATCAAA TERM 528 423648 - 423664 + T 73 -8 -4.07568 | TGGCGAGCGTGTTAG CAGCAC ATCAA GTGCTG TTTTCGGCGCAACCA TERM 529 424038 - 424020 - T 77 -10.2 -3.38046 | opp_overlap 424030, overlap 424018 GCTGCATTTTAAATA CCGGCGGC AGC GCCACCAG CGGCGTTTTGCTATT TERM 530 424030 - 424043 + T 70 -5.2 -4.46656 | opp_overlap 424020 424018 AAATACCGGCGGCAG CGCC ACCAGC GGCG TTTTGCTATTATCCG stbD 425569 - 424244 - | putative fimbriae; usher TERM 531 424569 - 424591 + g 84 -12.6 -3.33696 | overlap 424573 GTTAGCCCCAGGCGA CGCGCCGCCG CCA CGGCGGTGGG TTGATTAACGACAAA TERM 532 424573 - 424587 + g 75 -12.8 -2.60244 | overlap 424569 GCCCCAGGCGACGCG CCGCCG CCA CGGCGG TGGGTTGATTAACGA stbC 428135 - 425574 - | putative fimbriae; usher TERM 533 426837 - 426861 + g 100 -17.1 -3.4678 | opp_overlap 426833 GCTGTAACTGAGTTC CGCGCGCCAGC CTT GCTGGCGCTCG TTATGCTCTGCGCGT TERM 534 427665 - 427650 - G 87 -8.2 -4.58395 | opp_overlap 427659 GTTATGGCGTAAAAA CAGCGC CAGC GCGCCG CTATCCCACTCTGAA stbB 428880 - 428119 - | putative fimbriae; chaparone TERM 535 428932 - 428907 - R 95 -13.3 -4.18018 | overlap 428908 CCTGGCGATTGAAAA TGGTCTGGCGT TTCA ACGCCAGACCG TAGCGACAATTATTT TERM 536 428931 - 428908 - R 100 -16.8 -3.10597 | overlap 428907 CTGGCGATTGAAAAT GGTCTGGCGT TTCA ACGCCAGACC GTAGCGACAATTATT stbA 429478 - 428942 - | putative fimbriae; major subunit TERM 537 430484 - 430467 - gH 100 -6.3 -5.97575 | overlap 430471 AACCTATAAAAAAAA TCACCTC CCTA AAGGTGA GTGATGAAAACGTTA TERM 538 430778 - 430805 + GH 72 -2.2 -4.86001 | gap 1, opp_overlap 430785, overlap 430780 AATGGACGCCATCTT TATT-ATATCAGG GAG CCTAATATGAATA TTTTTCTGCAATGCT SC0384 430112 - 430876 + | putative inner membrane protein SC0385 430849 - 431349 + | putative periplasmic protein TERM 539 432322 - 432333 + G 100 -4.4 -5.74684 | CGTTATCGGCATACT GGTT ACAA AACC TTTTTATTTTTATTC TERM 540 432844 - 432825 - g 72 -2.2 -4.83615 | gap 1, overlap 432805 432826 CAGGTCGCAGAAAAA CTTTCAACG CTC CGT-GAAAA AGGCGTGTTAATAGC rtn 431649 - 433223 + | diguanylate cyclase/phosphodiesterase domain-containing protein SC0387 433323 - 434066 + | putative response regulator SC0388 434039 - 434527 + | putative inner membrane protein ail 434928 - 435452 + | hypothetical protein SC0390 435596 - 436237 + | putative response regulator TERM 541 436360 - 436348 - g 74 -3.3 -4.8855 | opp_overlap 436348, overlap 436349 AAAAAACAAAAATAA GGCTC AGA GAGCA TATTGAAAAAACTGA SC0391 436248 - 436472 + | putative inner membrane protein yjeI 436530 - 436889 + | putative outer membrane lipoprotein TERM 542 436960 - 436911 - T 70 -9.7 -3.10344 | opp_overlap 436900 436907 436919 TTTGCAGGCAATATA TGCCTGTTTAGCGCGCGCGCCGC ACTG GCGACGCGGGCGCTATTTGGGCT AACCTTGCTTTTTCT TERM 543 436919 - 436952 + T 100 -18.1 -3.61103 | opp_overlap 436911, overlap 436907 CAATATATGCCTGTT TAGCGCGCGCGCCGC ACTG GCGACGCGGGCGCTA TTTGGGCTAACCTTG oprM 438416 - 436959 - | outer membrane efflux protein-like protein TERM 544 437749 - 437713 - G 74 -11.5 -3.29511 | opp_overlap 437708 437717 TTGATTTCGGCAGAA CGCAGCGCGATCTCCGC CAT ACGCAGATCGAGCTGTG TGGCGTTGCCTGTCC TERM 545 439440 - 439421 - R 72 -9.3 -3.53012 | GCGTTTGTCTGGAAA CTGGCCA GCATAT TGGCCAG TTCGGGCGTCTGCAT TERM 546 440309 - 440321 + r 71 -6.9 -4.13767 | ATCGCCTTCTTTGCC GCCTC TCC GGGGC TTTTGCCCTGCGAGA TERM 547 441528 - 441517 - R 80 -7.2 -4.59773 | CGGCAGTTTTAAAAA GGCG ATAG CGCC AGCCAGCAGCATTAA mtrC 442823 - 441597 - | putative cation efflux pump TERM 548 442053 - 442089 + g 70 -3 -4.82901 | overlap 442038 442054 442057 CTGATAAGGCAGCCC GTTATCGGTGGTTAAC CCCAT GTTGACTACCGGTGGA TTTTTGTCGGAGCGG TERM 549 442361 - 442377 + g 81 -6.5 -4.68593 | GCGCATTACGCGTGG CGGTGAC ATC GTCAGCG TTTTTACGTGATACG TERM 550 443811 - 443829 + H 73 -10.2 -3.01712 | overlap 443813 CGTCTGGTGGGGCTA CAGGCGCG GGT CGCGCATG TGTTACGCGAGGGCC TERM 551 444065 - 444039 - H 71 -3.4 -4.86621 | overlap 444040 444041 ACCGTCAACCAAAAA GGCGCGCTCACG CTG CGGGCGACCGCC GTCGGCGGACAGACC hmrR 445402 - 445866 + | putative transcriptional regulator TERM 552 446125 - 446111 - g 70 -7 -4.07568 | opp_overlap 446098 CGCCGCCCTGCAAAA GGCCGG TTT CCCGCC GCGCGAGAGGTAATC hmb 445944 - 446138 + | putative copper chaperone TERM 553 446346 - 446326 - f 78 -6.1 -4.60678 | opp_overlap 446328 446329, overlap 446329 CAAAAAGATAACAAA TAAGTAGCG CAA CGCTACCTT GTTACGTCGCTTTGA TERM 554 446343 - 446329 - f 87 -10 -4.34559 | opp_overlap 446328 446329, overlap 446326 AAAGATAACAAATAA GTAGCG CAA CGCTAC CTTGTTACGTCGCTT TERM 555 447212 - 447231 + G 75 -7.1 -4.4009 | opp_overlap 447211 447212, overlap 447214 GATTTTTTATAACAT TGCCGCC ATGCTC GGCGGTA TTTTCTACGGTACGC TERM 556 447286 - 447273 - g 86 -6.7 -5.00884 | ATTGGGCGTAAAAAA GCGAT CATG ATCGC CGCCTTTCTTGCGCT jen 446430 - 447683 + | putative inner membrane protein TERM 557 447709 - 447735 + F 73 -7.9 -4.10453 | opp_overlap 447690, overlap 447732 CTTGGCGCATACTGT CGCCGGGAGCA CGCCT TCCTCCCGTCG TTTTCACGCCCTTTC mod 447872 - 449830 + | DNA methylase; restriction system res 449840 - 452812 + | DNA restriction (DNA helicase TERM 558 452890 - 452862 - f 74 -5.8 -4.60143 | opp_overlap 452862, overlap 452852 452864 ATAGACCATATAAAA TGGCCGCCGCGC AGCGA GCGTTGCGGTCA TTCTCCCTGTACTAA TERM 559 452862 - 452890 + F 77 -10.2 -3.40299 | opp_overlap 452852 452862 452864 ATAGACCATATAAAA TGGCCGCCGCGC AGCGA GCGTTGCGGTCA TTCTCCCTGTACTAA TERM 560 453145 - 453126 - g 73 -5.6 -4.56597 | overlap 453128 TTCGCTGTCGAAAAA GACGCCCC CTCC GAAGCGCC AGAGTCGGGCGATAA SC0400 453090 - 453191 + | putative cytoplasmic protein cydA 453308 - 454711 + | cytochrome BD2 subunit I TERM 561 454893 - 454909 + G 75 -5.7 -4.59853 | overlap 454899 CGAAACCTGGCTGGT GCTGGGC GGG GCCGGGC TTTTTGGCGCGTTCC cydB 454708 - 455718 + | cytochrome BD2 subunit II TERM 562 455864 - 455890 + G 100 -18.8 -4.83169 | ACTGATACCCCCGGA CGCGCTTTCGTC GCT GGCGAAAGCGCG TTTTTATCGACAGAT SC0403 455735 - 455959 + | putative inner membrane protein TERM 563 456715 - 456700 - g 70 -3.2 -4.74103 | gap 1, overlap 456701 456702 CCCGCAACGCAAAAA CG-CGGG CTT CCCGTCA CCGGTGAATATCAGC SC0404 456055 - 457059 + | AraC family transcriptional regulator TERM 564 457728 - 457712 - g 74 -7.9 -4.08767 | opp_overlap 457701 CTGACGTCGCGAAAA CCGGCGT TTG ATGCCGG GGGAGAAGTGAAGCT TERM 565 458614 - 458590 - g 91 -7.2 -4.84359 | gap 1, opp_overlap 458590 458601 CGATCTCGATAAAAA CAACGTCAGCA CCCG TGCCG-CGTTG CTTTATCTGTTCGAC foxA 457205 - 459313 + | ferrioxamine receptor yahN 459986 - 459354 - | paral putative transport protein TERM 566 459601 - 459584 - G 76 -2.7 -5.08824 | GCGTTACGGAAAAAA TACTGAT AAAA AACAGTA CGGTTTGCGGATTGG TERM 567 459667 - 459650 - G 74 -2.7 -4.86731 | gap 1 CCCGGCGAAAGAAAA TTGTCCAC GGG GCGG-CAA TTGGCGTCTGGAGCG TERM 568 459851 - 459831 - G 100 -12.5 -4.63932 | opp_overlap 459834 CAGCCCGGAATAAAA GGCGTCTCC CGT GGCGACGCC CAGGCCGGTGATGAC TERM 569 460255 - 460272 + G 71 -8.5 -3.85698 | TGCTTGGCGCATTAG CGTTTGT CGTG ACAAACG TTTATGCCGCAGAAA TERM 570 460317 - 460300 - g 91 -3.5 -5.5943 | gap 1, overlap 460301 460302 460304 AAATCATGAAAAAAA CGGACTTT GAT AAAGTC-G CCTCCGAATACACGA yahO 460218 - 460493 + | hypothetical protein TERM 571 460507 - 460543 + T 90 -13.2 -3.61398 | gap 1, opp_overlap 460513, overlap 460511 460513 AAAAGCGTTGCATCA TAAAAATACCCGCCTGG GTTT CC-GGCGGGTATATTTA TTCTTGGCAACCGGC TERM 572 460511 - 460539 + T 90 -9.6 -4.44667 | gap 1, opp_overlap 460513, overlap 460507 460513 GCGTTGCATCATAAA AATACCCGCCTGG GTTT CC-GGCGGGTATA TTTATTCTTGGCAAC TERM 573 460513 - 460537 + T 93 -12.2 -3.82963 | gap 1, opp_overlap 460513, overlap 460511 460507 GTTGCATCATAAAAA TACCCGCCTGG GTTT CC-GGCGGGTA TATTTATTCTTGGCA TERM 574 460537 - 460513 - T 100 -12.2 -4.91109 | gap 1, opp_overlap 460511 460507 460513 GTTGCATCATAAAAA TACCCGCCTGG GTTT CC-GGCGGGTA TATTTATTCTTGGCA prpR 462254 - 460629 - | prp operon regulator TERM 575 460878 - 460868 - G 100 -8.2 -5.42259 | CGACGCTTAAAAAAA GCGC CAG GCGC TCCATCATATTACGC TERM 576 461057 - 461013 - G 100 -14.3 -4.57569 | overlap 461014 461038 CGACTGTTTTAAAAA GCTTTCCGCGAGCGGCAAAAT ATC AGCCTGCCGCTCGCGCAAAGG AGGAAGCGTCAGACG TERM 577 461056 - 461014 - G 100 -17.8 -3.3422 | overlap 461013 461038 GACTGTTTTAAAAAG CTTTCCGCGAGCGGCAAAAT ATC AGCCTGCCGCTCGCGCAAAG GAGGAAGCGTCAGAC TERM 578 461190 - 461207 + g 74 -4.7 -4.7373 | GATCGGCTGGTGTCC GCCGACG CGAG TGACGGC TTTTTCCTCCAGTAC prpB 462520 - 463407 + | 2-methylisocitrate lyase TERM 579 463426 - 463461 + F 74 -8.2 -3.86897 | gap 1, opp_overlap 463424 463425 463445 GTAGGCCTGATAAGG CGAAGCCGCCATCAGGC AAT GCCGGATGGCA-CTACG TTTATCCCGCCTACG TERM 580 464041 - 464020 - g 71 -10.1 -3.57792 | opp_overlap 464018 GTATTCAGCCGGAAA CCGACGATG ATTC CATCGGCGG CCATTTCCTGCATCT prpC 463530 - 464699 + | methylcitrate synthase TERM 581 465766 - 465742 - g 85 -4.2 -5.28778 | gap 1, opp_overlap 465761, overlap 465756 ATTATCGATAAAAAA GGCCCGCTCAA TAAC CCG-GCGGACC GCGATCACTGTATCC TERM 582 466102 - 466074 - g 76 -10.9 -3.74303 | overlap 466070 466075 AAAATTTAAAATTAA CCTGGCGCGTCAG TTC CCGACTCGCCAGC AGCAACGCATTCTGG TERM 583 466101 - 466075 - g 83 -14.4 -2.82955 | overlap 466074 466070 AAATTTAAAATTAAC CTGGCGCGTCAG TTC CCGACTCGCCAG CAGCAACGCATTCTG prpD 464737 - 466188 + | 2-methylcitrate dehydratase prpE 466229 - 468115 + | propionyl-CoA synthetase TERM 584 468211 - 468190 - T 95 -14.4 -3.5936 | TGTAAAGTCGGGAAA GGGCGGCG GCAGCG CGCCGCCC TGTAACAGAATTAAC hemB 469196 - 468222 - | delta-aminolevulinic acid dehydratase TERM 585 469740 - 469726 - g 73 -5 -4.57569 | GCACTCCTGGAAAAA GAAACT TGT AGTCTC ACAATTAGCATTGGC yaiU 469709 - 472594 + | flagellar protein TERM 586 472638 - 472661 + F 100 -15.4 -3.61715 | opp_overlap 472638 ATTTAAACTGAAAAA TGCCCGTCAA GGAC TTGACGGGCA TTATTGCAAGGAATG TERM 587 472661 - 472638 - f 100 -15.4 -4.81851 | opp_overlap 472638 ATTTAAACTGAAAAA TGCCCGTCAA GGAC TTGACGGGCA TTATTGCAAGGAATG TERM 588 473290 - 473262 - g 70 -5.4 -4.40298 | gap 1 ATTGAAATGAATAAA GGCAAACTGATCA GTAT TAACC-GTTTGCC CTCCGAATATTAACA yaiV 472680 - 473303 + | putative DNA-binding transcriptional regulator TERM 589 473345 - 473310 - T 77 -3.9 -5.19251 | gap 1, overlap 473311 473331 GAATATTAACAAAAA GGTTGCGCCTCGT-CT GATAT AGCGCGAGGCGCGACG ACTCAGGATGCAGGA ampH 474505 - 473348 - | beta-lactamase/D-alanine carboxypeptidase TERM 590 474396 - 474380 - G 70 -5.1 -4.46212 | overlap 474382 GCCGCTACCATAAAA GATATGC TCG GCATAAC GATCAACGATATCAG sbmA 474852 - 476072 + | transport protein TERM 591 477069 - 477051 - g 80 -8.8 -4.13767 | TGGCCGAGGCCAAAA CGGGCAAG ACG CTTGCGCG GGAAATGTTGCCCGG yaiW 476087 - 477181 + | putative outer membrane lipoprotein yaiY 477527 - 477219 - | hypothetical protein yaiZ 477795 - 478010 + | hypothetical protein TERM 592 478030 - 477999 - T 90 -10.2 -4.21908 | gap 1, overlap 478001 GAGGATGAGGTAAAA GACGCCCGATAAACG TTG CGCT-ATCGGGCGTG CGCTATTACATCGTG TERM 593 478028 - 478001 - T 93 -12.8 -3.70674 | gap 1, overlap 477999 GGATGAGGTAAAAGA CGCCCGATAAACG TTG CGCT-ATCGGGCG TGCGCTATTACATCG ddl 479130 - 478036 - | D-alanyl-alanine synthetase A TERM 594 479194 - 479182 - H 75 -6.2 -4.49311 | overlap 479171 ATTACCACGACAAAA CGCG GGTTT CGCG GGGTTCTGCCATAAT SC0422 479208 - 479921 + | hypothetical protein TERM 595 480693 - 480703 + G 80 -4.6 -5.04175 | AAGCGAACGCCTGAG CGGT AAA GCCG TTTTTGTGTCGTTAC TERM 596 480730 - 480740 + G 76 -3.2 -5.04249 | TTACCTTATCCTGCG CTGG TGA TCAG TTTGTTTTTTACCAC yceE 480325 - 481305 + | putative permease TERM 597 481308 - 481343 + F 76 -9 -3.75332 | opp_overlap 481298 481305, overlap 481313 GAAAGGCCAATAGCG GCGCATCGTAACGGCG CTTC TGCCGTTACGATATGG TTTAAATTAAAAGAT TERM 598 481313 - 481338 + F 85 -14.1 -3.03781 | opp_overlap 481305, overlap 481308 GCCAATAGCGGCGCA TCGTAACGGCG CTTC TGCCGTTACGA TATGGTTTAAATTAA yaiB 481602 - 481862 + | hypothetical protein TERM 599 481916 - 481972 + F 100 -21.3 -2.82635 | TATAAAATAGCCCTG GCCGCTTCGTTTTTATTTTGCTCTG TATTAAC CAGAAGAAAATAAAAACGAAGCGGC TATGGTAATAACAGT psiF 482211 - 482531 + | hypothetical protein yaiC 482623 - 483735 + | diguanylate cyclase AdrA proC 484559 - 483750 - | pyrroline-5-carboxylate reductase yaiI 484699 - 485154 + | hypothetical protein aroL 485339 - 485884 + | shikimate kinase II TERM 600 485977 - 485965 - g 74 -4.7 -4.68593 | GTCACCATTGAAAAA GGCAC GCC GGGCC AGACGGTGACGTGGT yaiA 485911 - 486102 + | hypothetical protein aroM 486353 - 487030 + | hypothetical protein yaiE 487101 - 487385 + | hypothetical protein TERM 601 487390 - 487417 + T 72 -10.6 -2.90723 | gap 1 GCTATTTGTAACGGT GAGTCCCCTCTCC GGC GGAGAGGG-ACCC TCTGGTTAGCGCTGC rdgC 488334 - 487423 - | recombination associated protein TERM 602 488060 - 488072 + g 74 -7.7 -4.13767 | overlap 488062 CGTCCCTGATCGGCT TCCAG TTT CTGGA TTTTCGCCTCCAGAG TERM 603 489247 - 489269 + G 77 -4.8 -4.85782 | opp_overlap 489245 489247 AGCGCCTGTACAAGA CGGTTCCGTC GCT GATGAAATCG TTTGTTTTTGGCGGC yajF 488460 - 489368 + | fructokinase araJ 490560 - 489388 - | protein AraJ TERM 604 489600 - 489610 + g 77 -8.2 -4.07568 | overlap 489598 CGCCCAGCAGTTCGC CGCC TTT GGCG TTTTGCAGCAGCAGG TERM 605 490094 - 490084 - G 74 -2.4 -5.1356 | CGCGATCAATAAAAA GGTG TAG CGCC AGCTAAATTCCTGGC TERM 606 490281 - 490240 - G 77 -3.5 -5.0538 | gap 1, overlap 490241 490242 GCCGACGCCAAAAAA GGCGCCGTGCGGAAAGCCGG AAA CCAGTCTGCCG-ACGGCGAG CATCAGATATGACGA TERM 607 490594 - 490580 - R 74 -5.6 -4.64861 | overlap 490581 CCTGCCGAAAATAAA GGCGCA TGT TGCGCG CTGTGGCTGTGAATT TERM 608 490593 - 490581 - R 70 -9.1 -3.38435 | overlap 490580 CTGCCGAAAATAAAG GCGCA TGT TGCGC GCTGTGGCTGTGAAT sbcC 493873 - 490733 - | exonuclease subunit SbcC TERM 609 491048 - 491030 - G 71 -10.2 -3.28712 | TTCGCCGCCTGATAA CGTTCGCG TAT CGCGCACG GCGTCGGCCTGCCAG TERM 610 491965 - 491911 - G 80 -10.6 -3.78329 | opp_overlap 491949 GCGCAGGAAGGGAAA GCGTATACTGCGCCAAATCAGCCGTC AGC GACGCCTGACGCTGCGCAATCTGCGC GGTAAAGCGCGCTAC TERM 611 493015 - 493048 + g 91 -7.3 -4.83615 | gap 1, overlap 493027 ACTGGCGAGCAGGTT GCGCCAGCGTCAGCGC CGC GAGCTGCGGCTG-CGC TTTTTCTCGCGCCTC TERM 612 493152 - 493174 + g 71 -6.3 -4.24075 | gap 1, overlap 493152 AGGTGCTGCTGCTGT C-CTTGCTGG TCGG CCAGCAGGCG TTTCTCTTCGTCAGT sbcD 495072 - 493870 - | exonuclease subunit SbcD TERM 613 494944 - 494928 - G 72 -3.7 -4.73388 | AACCGGTATCAAAAA TATCGCC AGC GACAATA ATGGCATCCACCTGA phoB 495287 - 495976 + | transcriptional regulator PhoB TERM 614 495978 - 496019 + F 100 -15.3 -3.85389 | gap 1 CGACCCGCTTTTAAT GCCTTTTCCGCCAGTAGAAC ACA GGTTT-CTGGCGGAGAAGGC TTTCCATTCTTGAGG TERM 615 496106 - 496122 + G 100 -6.5 -5.69379 | CTCTGTTGCATCCCC GCGCTTA TCC TTAGCGC TTTTTTTGGTTATCT TERM 616 496533 - 496518 - g 74 -4.6 -4.68593 | CCCAGTATTTAAAAA CGCGTG ATTT CACCCG TCCGCTTCATTTGGT phoR 496046 - 497341 + | phosphate regulon sensor protein TERM 617 497368 - 497389 + T 100 -13.1 -4.90525 | opp_overlap 497371 AAGTATAACTTTCCA TAAGCCAGC GGAT GCTGGCTTA TTTTCTTTGCAGTTA TERM 618 497386 - 497371 - T 77 -10.4 -3.31799 | opp_overlap 497368 TATAACTTTCCATAA GCCAGC GGAT GCTGGC TTATTTTCTTTGCAG SC0440 497703 - 497554 - | hypothetical protein TERM 619 498042 - 498067 + GH 75 -9.7 -3.61654 | gap 1 TCGGGCCGTTATTTG CGACGCCG-CGT ACC GCGACGGTGTCG TTTGAGGTCGGTATC brnQ 497750 - 499069 + | LIVCS family branched chain amino acid transporter system II (LIV-II) TERM 620 499091 - 499113 + GF 100 -16.3 -5.64304 | opp_overlap 499094 TGACATATGTGTACA CCACGGGGC TTAAC GCCCCGTGG TTTTTTATTGTGTTG TERM 621 499110 - 499094 - gf 71 -10.8 -2.63301 | opp_overlap 499091 CATATGTGTACACCA CGGGGC TTAAC GCCCCG TGGTTTTTTATTGTG TERM 622 499962 - 499929 - gf 71 -10.3 -2.71364 | overlap 499941 CTATCCGTGGAATCA GGTCGGCACAAACGG CAGC CCATTTGTGCTGACG TTCCAGCATATGGGG proY 498982 - 500514 + | putative proline-specific permease TERM 623 500877 - 500834 - g 75 -11.6 -3.36515 | gap 1, overlap 500832 GGCGATGCGCAAACA GCGCCGCCAGCCGCAGCCG GGCGTGA CGGC-GTGGCGAGCGACGC TCAATATCGCGTTAG malZ 500676 - 502493 + | maltodextrin glucosidase TERM 624 502529 - 502546 + T 100 -12.7 -4.42653 | opp_overlap 502529 CTTACGCATAAAAAA GGCTCGC ATTC GCGAGCC TTTTATCAATGCACT TERM 625 502546 - 502529 - T 100 -12.7 -5.28176 | opp_overlap 502529 CTTACGCATAAAAAA GGCTCGC ATTC GCGAGCC TTTTATCAATGCACT tsaA 503167 - 502565 - | putative thiol - alkyl hydroperoxide reductase TERM 626 503284 - 503311 + r 76 -7.8 -4.36914 | TTTTGCCTATCGATC GGGTCATTATAA ATCG TAATGATGACCC TTTTATGACAGCGAA yajB 503958 - 503377 - | acyl carrier protein phosphodiesterase TERM 627 504596 - 504568 - g 86 -7.9 -4.70659 | opp_overlap 504583 GTCTACAGTGAAAAA CCGGGCGCCGTCG CCG CGCCGACCGCCGG GCTGCACTTTGACGA queA 504052 - 505116 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 628 505333 - 505366 + G 76 -9.6 -3.79251 | gap 1, opp_overlap 505332 ATTTGAGTTAGATAC CACC-GATGGTCGCG CGCGT CGCGGTCGTCTGGTG TTTGATCGTGGCGTA tgt 505313 - 506440 + | queuine tRNA-ribosyltransferase yajC 506463 - 506795 + | preprotein translocase subunit YajC TERM 629 506962 - 506932 - g 89 -13.4 -3.53091 | gap 1 ATCCGGCTGTTCAAA TCACTGGCGTGCG CGGCGT CGC-CGCCAGTGA GCAAACGCTGATCCA secD 506823 - 508670 + | preprotein translocase subunit SecD TERM 630 509644 - 509620 - g 76 -5.6 -4.72486 | opp_overlap 509623 509624 CAGAAAGTCGAAAAA GAAGGGGCGG ATCAG CCGTCCATTC TGCCGTAAACACGTA secF 508681 - 509652 + | preprotein translocase subunit SecF TERM 631 509677 - 509696 + F 100 -10 -6.02914 | TAAGTGTTATCTGAA TCCCGGTC ATAC GATCGGGA TTTTTTTTATGTACC SC0451 509797 - 510162 + | hypothetical protein TERM 632 510588 - 510598 + G 74 -8.2 -3.9749 | overlap 510587 GTACATCTCCACATT CGCG CAG CGCG TTTGATCTTATCCAT SC0452 510188 - 510880 + | putative regulatory protein yajD 511050 - 511397 + | hypothetical protein TERM 633 511409 - 511395 - T 72 -2.8 -5.06961 | ATGAACAAAAAGAAA TAAGCA GAC TGCTGA CAAAGCTGTTGGTGC TERM 634 511496 - 511514 + T 88 -7.4 -5.00616 | overlap 511497 TTATTGGTTTTCGTA GGTCGGAT GCA ATCCGACA TTTTTTCAGCCCCGG TERM 635 511497 - 511513 + T 82 -10.9 -3.60048 | overlap 511496 TATTGGTTTTCGTAG GTCGGAT GCA ATCCGAC ATTTTTTCAGCCCCG TERM 636 511581 - 511600 + T 100 -6.4 -6.20267 | ACATTGTCACTGGAA TCCCGATC GCAA GGTTGGGA TTTTTTTGTTTTTAA TERM 637 511937 - 511912 - T 72 -8.9 -3.5393 | opp_overlap 511914, overlap 511913 AGCATGCGCCCGAAA CGGGCCAGAGG GCGA CCTCTGGCCTT TTTTGCAGGTTTAGA TERM 638 511936 - 511913 - T 78 -12.4 -2.72144 | opp_overlap 511914, overlap 511912 GCATGCGCCCGAAAC GGGCCAGAGG GCGA CCTCTGGCCT TTTTTGCAGGTTTAG TERM 639 511914 - 511935 + T 100 -15.9 -5.07107 | opp_overlap 511913 511912 CATGCGCCCGAAACG GGCCAGAGG GCGA CCTCTGGCC TTTTTTGCAGGTTTA tsx 512916 - 511948 - | nucleoside channel; receptor of phage T6 and colicin K TERM 640 512864 - 512854 - G 70 -6.8 -4.21812 | opp_overlap 512854 CGGGAGTGAAAAGAA CGCA ATT TGCG TTTCTAAATATTTCG yajI 513650 - 513111 - | hypothetical protein ybaD 513802 - 514251 + | transcriptional regulator NrdR TERM 641 514464 - 514441 - g 70 -6.6 -4.07687 | opp_overlap 514447, overlap 514447 514448 ATGGCGGGCGCAAAA GCCAAAGGCG CAAC CGCCTATGTC ACGCTTGAACCCTGT TERM 642 514458 - 514447 - g 71 -7.2 -3.92659 | opp_overlap 514447, overlap 514441 514448 GGCGCAAAAGCCAAA GGCG CAAC CGCC TATGTCACGCTTGAA ribD 514255 - 515358 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 643 515871 - 515855 - g 74 -7.9 -4.17132 | overlap 515856 515864 AAAGCCGGTAATAAA GGCGCAG AAG CTGCGCT GACCGCGCTTGAAAT TERM 644 515870 - 515856 - g 72 -11.4 -3.09556 | overlap 515855 515864 AAGCCGGTAATAAAG GCGCAG AAG CTGCGC TGACCGCGCTTGAAA ribH 515447 - 515917 + | riboflavin synthase subunit beta nusB 515938 - 516357 + | transcription antitermination protein NusB TERM 645 516364 - 516406 + F 88 -5.6 -5.61277 | gap 2, opp_overlap 516373 516377, overlap 516394 AAAAAGTGATTCACA GGCCGGAAAGATAGCGGG CGATCGATA CCCGCCGTCT--CCGGCC TTTTCTTTTTTTCTG TERM 646 517358 - 517376 + G 70 -6.7 -4.18018 | opp_overlap 517369 GGATCGCCTTTGTGC GTGACGG AGAAC CTGTCAC TTTTGACTGGAAAGG thiL 516436 - 517416 + | thiamine monophosphate kinase pgpA 517394 - 517909 + | phosphatidylglycerophosphatase A yajO 518987 - 518013 - | putative oxidoreductase / K + channel protein TERM 647 518450 - 518471 + g 76 -5.2 -4.82901 | gap 1, opp_overlap 518454, overlap 518454 GATCCTGCATGGTGA CAA-ACGGC GCCCA GCCGTGTTG TTTTTGTAGCGCCAG dxs 520906 - 519044 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 648 519217 - 519230 + g 73 -5.2 -4.63932 | CGCCGCTGCCAGCGC CGCC CATAAT GGCG TTTTCTTCCAGCGTC TERM 649 520477 - 520427 - G 71 -9.8 -3.54543 | gap 3, opp_overlap 520427 520426 520424 520474 ATTCATTGCTTCAAA CGCCATACCGGC-G-GTGA-TGGCG CCGT CGCCAATCACACAGACGGTGCGGCG ATCTTTGCCTTCTTT ispA 521829 - 520930 - | geranyltranstransferase TERM 650 521265 - 521284 + g 71 -12.1 -2.53271 | overlap 521264 521263 CGCCAAGTCTAACGG CGGCGCG AATGAG CGCGCCG GTCTTATGGCGATGA xseB 522072 - 521830 - | exodeoxyribonuclease VII small subunit TERM 651 522465 - 522455 - g 75 -6.8 -4.49756 | overlap 522456 CGCCAAAGATGAAAA CCAG CGT CTGG CGATTCGCGACGCGC TERM 652 523390 - 523360 - g 73 -6.2 -4.37711 | opp_overlap 523358 523360 523361, overlap 523353 523361 CCATTAAAGCGAAAA TTGAAGCCGAAG AAGAAAA CTTCGACTTCAG TATTCTCGATAAGGT xseB 522282 - 523730 + | thiamine biosynthesis protein ThiI phnV 524571 - 523774 - | 2-aminoethylphosphonate transporter, memrane component phnU 525434 - 524574 - | 2-aminoethylphosphonate transporter, memrane component phnT 526546 - 525437 - | 2-aminoethylphosphonate transporter,ATPase component phnS 527565 - 526552 - | 2-aminoethylphosphonate transporter, periplasmic-binding component TERM 653 526828 - 526848 + g 93 -12.5 -4.05446 | opp_overlap 526827 526824 AATGACATAAGGGAT GGCCAGCGC GCT GCGCTCGCC TTTGTCGTTGGCCGG phnR 528482 - 527763 - | 2-aminoethylphosphonate transport, repressor TERM 654 528166 - 528181 + g 75 -6 -4.65895 | opp_overlap 528164, overlap 528164 ACGGTGGTTAACACG CCGCTC AGTA GCGCGG TTTTTGGCTCCCGCC phnW 528622 - 529725 + | 2-aminoethylphosphonate--pyruvate transaminase phnX 529732 - 530544 + | phosphonoacetaldehyde hydrolase TERM 655 530566 - 530614 + T 100 -16.1 -3.53444 | opp_overlap 530551, overlap 530558 530568 530569 TGCCGGATGGCGCTG CCGCTTATCCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGGTG TTTACGCCGCCATCC TERM 656 530568 - 530612 + T 100 -17.3 -3.34517 | opp_overlap 530551, overlap 530566 530569 CCGGATGGCGCTGCC GCTTATCCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGG TGTTTACGCCGCCAT TERM 657 530569 - 530611 + T 100 -20.8 -2.60496 | opp_overlap 530551, overlap 530568 530566 CGGATGGCGCTGCCG CTTATCCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAG GTGTTTACGCCGCCA thiJ 531231 - 530641 - | hypothetical protein apbA 532105 - 531194 - | 2-dehydropantoate 2-reductase yajQ 532231 - 532722 + | nucleotide-binding protein yajR 534061 - 532769 - | MFS family transporter TERM 658 534094 - 534117 + r 70 -5.3 -4.51097 | gap 1 TCCCTAAACCCCATG TGGCGCGCAG CTCCC CTG-GCGTCA TTTTATAATCGTTCA tnp 534522 - 534361 - | IS903 transposase TERM 659 535164 - 535174 + G 91 -2.4 -5.76949 | AAATAATAGACCCGA GAGC GAT GCGC TTTTTTTTAGCCGTA TERM 660 535383 - 535369 - g 73 -5.6 -4.56597 | opp_overlap 535356 GCCGCCGCGGAAAAA GGCGTC GTT GAGGCC CAATCTCTCTTGGGG TERM 661 535828 - 535813 - g 93 -4.7 -5.47399 | GTAACCCTAAAAAAA GAGAG TATTTT CTCTC GCGGGATAACGGCTA SC0479 534670 - 536181 + | putative periplasmic protein ybeQ 536193 - 537662 + | hypothetical protein TERM 662 537703 - 537676 - T 100 -13.6 -4.18762 | overlap 537679 AACTGCGAGCGAAAA TAATGGCGTATC AAGC GATACGCCATCA AAAGTCTTACCAGAC TERM 663 537700 - 537679 - T 95 -13.1 -4.21812 | overlap 537676 TGCGAGCGAAAATAA TGGCGTATC AAGC GATACGCCA TCAAAAGTCTTACCA cyoE 538645 - 537710 - | protoheme IX farnesyltransferase TERM 664 538179 - 538156 - GT 70 -9.5 -3.09516 | overlap 538159 CGGCGCAGTAGCCAA TCACCGGCG GCGCTG CGCCGGAGA GAGAACCAATCAGCG TERM 665 538521 - 538501 - GT 71 -9.7 -3.13177 | overlap 538483 ACAGGGGATAGTCAA TGCTGCCCT TTG AGGCCAGCA GAAATCCCCCGATCA cyoD 538941 - 538612 - | cytochrome o ubiquinol oxidase subunit IV TERM 666 538725 - 538696 - GR 75 -10.1 -3.62572 | opp_overlap 538722 GATCAGCACGGTAAA GATGAAGGCCG TCATGTTC CAGCCTTCATC AGATTTGGTGTTCAT cyoC 539555 - 538941 - | cytochrome o ubiquinol oxidase subunit III cyoB 541536 - 539545 - | cytochrome o ubiquinol oxidase subunit I TERM 667 539590 - 539601 + g 75 -5.8 -4.66833 | opp_overlap 539589 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGACTTCCGG TERM 668 541475 - 541434 - G 95 -14.5 -3.46081 | opp_overlap 541434, overlap 541468 TACCGAAGTAAGTAA TCGCTGCCAGTATCGCCAG TCCC CCGACGATAATTGCAGCGA TCGTTACCATGACGA cyoA 542503 - 541547 - | cytochrome o ubiquinol oxidase subunit II TERM 669 542038 - 542023 - G 95 -11.8 -4.42806 | opp_overlap 542032 TCACTTTGAAATAAA CCGGCG TGTT CGCCGG GAAGGCGATCTCGTT TERM 670 542115 - 542128 + g 70 -3.1 -4.77036 | opp_overlap 542110, overlap 542116 TCCATGGAAACCACT TCGAT GGTG ATCGG TTTTTCGTCATGCGC ampG 544437 - 542956 - | muropeptide transporter TERM 671 543025 - 543012 - G 71 -8.1 -3.81755 | ACCCGCCAAAGACAA TGCCG CACA CGGCA ACCGCTACCGCAGTT TERM 672 543475 - 543487 + g 74 -3.4 -4.88736 | AAAGACCGCCGCGCC CATG CTGAA CATG TTTTTATCGGTAATG TERM 673 543797 - 543782 - G 73 -6.1 -4.42806 | opp_overlap 543791 TTACGGCCAAAGAAA TCGCG TAGCGG CGCGA CGACGGCCTGTTCCA TERM 674 544443 - 544462 + r 100 -15 -4.03167 | opp_overlap 544445 ACATAGGCATCTACA GACCCGGC TTCT GCCGGGTC TTGTTGTTGCTATTA TERM 675 544460 - 544445 - R 77 -11.8 -2.92091 | opp_overlap 544443 ATAGGCATCTACAGA CCCGGC TTCT GCCGGG TCTTGTTGTTGCTAT yajG 545053 - 544475 - | hypothetical protein TERM 676 545492 - 545512 + G 86 -7.5 -4.73613 | overlap 545487 GGTCGTGCTGGTGAG CGATCGCTT TAC AGGCGAACG TTTTCTTAATCGTCA bolA 545367 - 545675 + | transcriptional regulator BolA TERM 677 545731 - 545754 + F 93 -9.6 -4.59984 | opp_overlap 545736, overlap 545736 GCTACAGAATTATGT GAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGAATTTT TERM 678 545736 - 545749 + F 100 -9.5 -5.23292 | opp_overlap 545736, overlap 545731 AGAATTATGTGAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGA TERM 679 545749 - 545736 - f 83 -9.5 -4.17425 | opp_overlap 545736 545731 AGAATTATGTGAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGA tig 546022 - 547320 + | trigger factor TERM 680 547356 - 547377 + F 100 -11.6 -6.22802 | opp_overlap 547356 AAATTTGCACAAAAA CCCGTCAC CTTTCA GTGACGGG TTTTTTTTTGTCACG TERM 681 547377 - 547356 - f 100 -12.3 -4.86033 | opp_overlap 547356 AAATTTGCACAAAAA CCCGTCACC TTTC AGTGACGGG TTTTTTTTTGTCACG clpP 547568 - 548191 + | ATP-dependent Clp protease proteolytic subunit clpX 548443 - 549714 + | ATP-dependent protease ATP-binding subunit TERM 682 549742 - 549770 + F 80 -6.7 -4.8048 | opp_overlap 549747, overlap 549747 ACAATCAGTTAGCCA AAAAAGGGGGGAT TTT ATCTCCCCTTTCG TTTTTCCTGTAAACA TERM 683 549765 - 549747 - f 100 -8.8 -5.09895 | opp_overlap 549742 549747 CAGTTAGCCAAAAAA GGGGGGAT TTT ATCTCCCC TTTCGTTTTTCCTGT TERM 684 549747 - 549765 + F 91 -11 -4.3623 | opp_overlap 549747, overlap 549742 CAGTTAGCCAAAAAA GGGGGGAT TTT ATCTCCCC TTTCGTTTTTCCTGT TERM 685 550069 - 550048 - g 89 -2.9 -5.67967 | overlap 550051 ACCATGATAAAAAAA TCATGCTGG TCGC CCAGAAGGA AGCATCAACGGATGA TERM 686 550352 - 550342 - g 100 -5.4 -5.80364 | overlap 550343 AGCTGAACAAAAAAA TTCC GCC GGAA GTGCTGACGTCACTC TERM 687 550846 - 550833 - g 76 -3.1 -5.10029 | gap 1, overlap 550823 550835 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTCGA TERM 688 550851 - 550835 - g 80 -9.4 -4.17355 | overlap 550823 550833 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTCGATACTG TERM 689 551895 - 551883 - g 70 -3.3 -4.72986 | GACTTTTACGAAAAA CGCGA TAT CCACG TTCACGTGCCGGAAG lon 549900 - 552254 + | DNA-binding ATP-dependent protease La TERM 690 552287 - 552316 + F 100 -8.6 -5.72616 | gap 1, opp_overlap 552287 552286 CGCTAATAAAAACAG GGCTGGCAGG-CT ATTTC GGACTTGCCAGCC TTTTTTTGTATAGCT hupB 552463 - 552735 + | transcriptional regulator HU subunit beta TERM 691 552771 - 552790 + F 100 -10 -5.45652 | opp_overlap 552770 552771 GTGACAAAGTACAAG GGCGCATC AACT GATGTGCC TTTTTTATTGGCGAT TERM 692 553925 - 553907 - g 76 -11.8 -3.07947 | overlap 553899 553898 GAACAAGGGCGAAGA TTTCGCCA CGC TGGCGAAA GAGAAATCTACCGAT TERM 693 554046 - 554031 - g 93 -4.6 -5.50723 | opp_overlap 554031, overlap 554032 GGATTAAAAGAAAAA GGCCAG ATAT CTGGCG TGATTAAGTCGTCTG TERM 694 554045 - 554032 - g 71 -8.1 -3.88807 | opp_overlap 554031, overlap 554031 GATTAAAAGAAAAAG GCCAG ATAT CTGGC GTGATTAAGTCGTCT TERM 695 554805 - 554784 - g 90 -5.1 -5.27923 | gap 1 GAAGCGCAGAAAAAA GCGATGGTGC AGG GCATCA-CGC AGAACAATGCGCAAA cypD 553026 - 554897 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 696 554945 - 554960 + F 100 -11.8 -4.39571 | opp_overlap 554945 GTTGTATCCCACAAA GGCCGC TTTC GCGGCC TTTTCCATTTCTGAG TERM 697 554960 - 554945 - f 95 -11.8 -3.89346 | opp_overlap 554945 GTTGTATCCCACAAA GGCCGC TTTC GCGGCC TTTTCCATTTCTGAG ybaV 555047 - 555421 + | hypothetical protein TERM 698 555457 - 555479 + F 73 -10.7 -3.00601 | overlap 555452 555459 ATTTGCCAGACTGTA GAGGTCATA CCAGT TATGACCTC TGTACTTGTCGTTTA TERM 699 555815 - 555839 + G 70 -2.7 -4.69415 | overlap 555816 GGAGCCAGAAGGGCA GGTGGTGGCCG ATG CGCTCATCACG TTTGTTTGTATTGAT ybaW 555525 - 555923 + | hypothetical protein ybaX 556829 - 556029 - | queuosine biosynthesis protein QueC ybaE 558504 - 556789 - | putative ABC transporter periplasmic binding protein TERM 700 558051 - 558039 - GH 76 -3.3 -5.055 | TTAACCCGGAAAAAA CTTGC CCT GCGAG ATGCTGTTCCGCGCG TERM 701 558498 - 558508 + gH 76 -5.4 -4.68545 | GCCTCATAGAAACCC GGAA CAC TTCC TTTTATCTGTTCACT cof 558590 - 559408 + | hypothetical protein TERM 702 559426 - 559444 + T 100 -10.3 -6.11019 | opp_overlap 559426 GATCTCTTCCAGCAA GCCAGAC ATTCA GTCTGGC TTTTTTTTGGTTTTT TERM 703 559444 - 559426 - T 74 -10.3 -3.14344 | opp_overlap 559426 GATCTCTTCCAGCAA GCCAGAC ATTCA GTCTGGC TTTTTTTTGGTTTTT SC0500 560513 - 559458 - | putative cysteine synthase/cystathionine beta-synthase TERM 704 560159 - 560186 + g 86 -10.8 -4.13767 | AATGACAGTGGCCGC CGTAAAATTGAA TCTG TTCGATTTTACG TTTTGCGGTACAGGC ybaO 560625 - 561083 + | putative transcriptional regulator (AsnC familiy) TERM 705 561841 - 561825 - g 86 -6.5 -5.07486 | opp_overlap 561829 561834 561835, overlap 561828 TACCGGCAAGAAAAA TATGCGC GTG GCGCGTA TTGACGCGCGTTTTG TERM 706 561834 - 561851 + G 74 -6.9 -4.25283 | opp_overlap 561828 561825, overlap 561829 561835 GAAAAATATGCGCGT GGCGCGT ATTG ACGCGCG TTTTGATCCAACCAT TERM 707 562361 - 562380 + G 90 -5.7 -5.18726 | gap 1, overlap 562352 GGCGTAGCCGACTGG CGGTCGTC AGCCA GACG-CCG TTTTTGTTCTCGGAC mdlA 561124 - 562896 + | putative multidrug transporter membrane\ATP-binding components TERM 708 563046 - 563061 + G 70 -9 -3.66178 | opp_overlap 563044 563046 ATTTCATTGATAACA TGGTGG CCCG CCACCA TTTACCGTTGGGCAA TERM 709 563390 - 563402 + G 70 -3.3 -4.77757 | overlap 563391 CTTGACTGGCGGATG GCGCT GGT AGCGA TTTTGATTTTTCCGG mdlB 562889 - 564670 + | putative multidrug transporter membrane\ATP-binding components TERM 710 564705 - 564721 + G 95 -6.5 -5.30616 | overlap 564699 564706 AAACCTCGCCCATCA TGCACCG TCA TGGTGCG TTTTTCTTTCCCTGC TERM 711 564767 - 564782 + G 71 -6 -4.2828 | opp_overlap 564766 564767 CGTCAATATAAAGAC GCGCCG CTAA CCGCGC TTTTCCTCGCTCGCC SC0504 564674 - 564832 + | hypothetical protein glnK 564883 - 565221 + | nitrogen regulatory protein P-II 2 amtB 565253 - 566548 + | ammonium transporter TERM 712 566625 - 566643 + T 83 -4.4 -5.33848 | opp_overlap 566605 566627 566628, overlap 566627 566628 CGTCATCAGGCCATT AACGCCGC ATA GCGGCATG TTTTTTAATTGTGAT TERM 713 566627 - 566641 + T 74 -7 -4.29187 | opp_overlap 566605 566627 566628, overlap 566625 566628 TCATCAGGCCATTAA CGCCGC ATA GCGGCA TGTTTTTTAATTGTG TERM 714 566628 - 566640 + T 74 -10.5 -3.15885 | opp_overlap 566605 566627 566628, overlap 566627 566625 CATCAGGCCATTAAC GCCGC ATA GCGGC ATGTTTTTTAATTGT TERM 715 566640 - 566628 - T 70 -10.5 -2.50113 | opp_overlap 566628 566627 566625, overlap 566605 566627 CATCAGGCCATTAAC GCCGC ATA GCGGC ATGTTTTTTAATTGT tesB 567508 - 566648 - | acyl-CoA thioesterase II TERM 716 567127 - 567150 + g 85 -4.4 -5.27779 | overlap 567111 567137 CTGACGGTAGTCCTT CCGGCCCGAC TGCC GTCGGCATGG TTTTTTGATGTTCGA TERM 717 567607 - 567593 - H 72 -5.7 -4.38712 | CCGATGGGTACAAAA GTCTG AATAA CAGAC CAATTCCAGGCAAAA ybaY 567723 - 568292 + | glycoprotein/polysaccharide metabolism TERM 718 568304 - 568324 + T 100 -16.9 -3.14132 | opp_overlap 568294 568293 TTAATCCTGCGCCAA CCCTCTCCG TTA CGGAGAGGG TTAATACACCCAGCG ybaZ 568714 - 568325 - | putative methyltransferase ylaB 570495 - 568945 - | diguanylate cyclase/phosphodiesterase domain-containing protein TERM 719 569488 - 569513 + g 80 -8.9 -4.15044 | GGTGTCGATGATTAG CCGGGTTAGCG GCTC CGTGAGCCCGG TTTGTTCAGCCAGCG TERM 720 569549 - 569538 - G 74 -3 -4.84359 | opp_overlap 569543 CCAGCGCGATAAAAA TTTC CGGC GAAA GGAAAGTGCCGTCCG rpmE2 570720 - 570980 + | 50S ribosomal protein L31 type B rpmJ 570986 - 571126 + | 50S ribosomal protein L36 TERM 721 571151 - 571174 + T 100 -10.3 -5.4505 | opp_overlap 571151 GGTTCAGGGAAAGCA GTGCGTACC AGGGAG GGTGCGCAC TTTTTTATTACCGGC ylaC 571652 - 571182 - | hypothetical protein maa 572321 - 571770 - | maltose O-acetyltransferase TERM 722 572266 - 572299 + g 100 -3.8 -5.95286 | overlap 572269 TCCTGGCATAAAGTT TCATCGGTCGGGCA ATACAG TGCCCCAGCGATCA TTTTTTGTTTTTCGT hha 572718 - 572500 - | hemolysin expression-modulating protein ybaJ 573120 - 572746 - | hypothetical protein TERM 723 573597 - 573582 - R 100 -11.8 -5.00616 | opp_overlap 573582 TTTTTGCGTAAAAAA GGCCGC TTGC GCGGCC TTATCAACAGTGAGC TERM 724 573582 - 573597 + r 82 -11.8 -3.30124 | opp_overlap 573582 TTTTTGCGTAAAAAA GGCCGC TTGC GCGGCC TTATCAACAGTGAGC acrB 576765 - 573616 - | acridine efflux system protein TERM 725 574546 - 574560 + g 76 -5.6 -4.77438 | opp_overlap 574545 GTCGCTAATAGACAC GCCCAG CGC CTGAGC TTTTTCCTGGTCGAT TERM 726 576639 - 576678 + g 74 -10.8 -3.57144 | overlap 576640 TTGCGGAGATCGTCA CTGCTGGTGGCGCAAT CGTCGGAT ATTGCGCTACCGGCAA TTTGAGGATCGCGAG TERM 727 576640 - 576677 + g 83 -14.3 -2.74144 | overlap 576639 TGCGGAGATCGTCAC TGCTGGTGGCGCAAT CGTCGGAT ATTGCGCTACCGGCA ATTTGAGGATCGCGA acrA 577873 - 576788 - | acridine efflux pump TERM 728 577952 - 577970 + H 82 -6 -5.17744 | opp_overlap 577948 CATCAGAACGACCGC CAGAGG CGTTAAC CCTCTG TTTTTGTTCATATGT TERM 729 578782 - 578802 + H 72 -4.8 -4.61868 | gap 1, opp_overlap 578782 578780 578783, overlap 578782 578783 CTCCCCCTGATAATA T-TCCAGGA AAAC TCCTGGACA TTTTCTGTGTCGCTA TERM 730 579711 - 579697 - g 90 -5.6 -5.15969 | opp_overlap 579697 579698, overlap 579698 CGCTAACGGAAAAAA CGGCCC AGG AGGCCA TTTCGCCGGACGAAA TERM 731 580196 - 580179 - g 70 -5.5 -4.47183 | GATCAGCTAAATAAA CAGTTGG GTAA CCAGCTG ATGATGGCGATTAAC TERM 732 580265 - 580278 + G 74 -2.4 -5.08824 | opp_overlap 580260 AAATCTGAAAGCCAT TCTG ACGCAG CAGA TTTTTTGGGTGAACA aefA 578895 - 582257 + | potassium efflux protein KefA SC0520 583222 - 582299 - | putative transposase TERM 733 582415 - 582442 + g 91 -9.8 -4.58283 | overlap 582407 GCGCTTCGGCCTCAC GGCCTTGTGCTA ACCC TTGCTCAAGGCC TTTTTGCAACCCTTC TERM 734 582545 - 582563 + g 71 -8 -3.8901 | opp_overlap 582544 CAGTTGACGAATTAG CGCCCCGG GTT CTGCGGCG TTTCCTGCTTTCAAC ybaM 583459 - 583292 - | hypothetical protein priC 584000 - 583473 - | primosomal replication protein N'' ybaN 584051 - 584446 + | hypothetical protein TERM 735 584451 - 584440 - f 71 -3.6 -4.89562 | TGAAAAGCAACAAAA GCGC TGAA GCAC ACGAATCGCTGTTGC apt 584599 - 585150 + | adenine phosphoribosyltransferase TERM 736 585187 - 585211 + F 100 -16.5 -3.09671 | opp_overlap 585187 585190, overlap 585190 TTTTAGCCAGAGAGA CAACCTCGCTG TAT CGGCGAGGTTG TGTTAGCATTACCCT TERM 737 585211 - 585187 - f 88 -14.3 -3.0094 | opp_overlap 585187 585190, overlap 585190 TTTTAGCCAGAGAGA CAACCTCGCTG TAT CGGCGAGGTTG TGTTAGCATTACCCT TERM 738 585190 - 585208 + F 93 -12.4 -3.69069 | opp_overlap 585187 585190, overlap 585187 TAGCCAGAGAGACAA CCTCGCTG TAT CGGCGAGG TTGTGTTAGCATTAC TERM 739 585208 - 585190 - f 79 -10.2 -3.64912 | opp_overlap 585190 585187, overlap 585187 TAGCCAGAGAGACAA CCTCGCTG TAT CGGCGAGG TTGTGTTAGCATTAC TERM 740 586594 - 586550 - g 100 -6.3 -5.85244 | opp_overlap 586559, overlap 586557 AACCAAAACAAAAAA GAGTGAACCGGCAGCCGCA TCCCGCG CGCGGCCGGTGAATCACTC TGCGCTGGAGCGGCT TERM 741 586584 - 586557 - g 75 -11.2 -3.37016 | gap 1, opp_overlap 586559, overlap 586550 ACAAAAAAGAGTGAA CCGGCAGC-CGCA TCC CGCGCGCGGCCGG TGAATCACTCTGCGC TERM 742 586790 - 586777 - g 90 -5.2 -5.1861 | overlap 586778 TGGAGCATGAAAAAA CGCC GGAGCT GGCG GCTAAACTGGCGGCG TERM 743 586991 - 586973 - g 74 -6.7 -4.25104 | gap 1 CGGCGCGCAGCAAAA GCTG-GCG CAAG CGCTCAGC GATCTGACGGGAACG TERM 744 587108 - 587091 - g 74 -6.9 -4.24075 | opp_overlap 587091 587088 ATTTATGAAGAGAAA CTCGCGC AAGC GCGTGAG TCAATTATTGCGGAT TERM 745 587169 - 587129 - g 73 -9 -3.7941 | gap 1, opp_overlap 587132 TATTGCGGATAATAA CATTCAGACGCTGCGTCGA TTCT TCGACGCCGAG-CTGGATG AAGAGAGTATCCGCC dnaX 585264 - 587192 + | DNA polymerase III subunits gamma and tau TERM 746 587193 - 587211 + F 73 -9.6 -3.30124 | ATCCGCCCCATTTGA TCGTAAGC CTG GCTTGCGA TTGTGAACCATCAAG TERM 747 587311 - 587299 - g 79 -3.4 -5.17353 | AGATGCAGGAAAAAA TGCA GAAAA TGCA GGAAGAGATTGCGCA ybaB 587238 - 587567 + | hypothetical protein TERM 748 587987 - 587976 - g 85 -4.4 -5.24129 | opp_overlap 587976 TGGCGTCAGAAAAAA TCAG TGAG CTGA TCCTTGCAACCAACC recR 587567 - 588172 + | recombination protein RecR TERM 749 588201 - 588178 - f 100 -13.8 -4.1552 | TATTTTCTGAACAAA CGGAGGCGGC ATTC GCGGCCTCCG CTTGAAATCACACCT htpG 588259 - 590157 + | heat shock protein 90 TERM 750 590228 - 590256 + F 84 -5.2 -5.31877 | gap 1, opp_overlap 590195 590239, overlap 590229 590253 CGAGTACTGTTTGTA GGCCGGATAAGCG CCAG CGCC-ATCCGGCA TTTTTTATAATGCCT TERM 751 590229 - 590255 + F 72 -8.7 -3.78042 | gap 1, opp_overlap 590195 590239, overlap 590228 590253 GAGTACTGTTTGTAG GCCGGATAAGCG CCAG CGCC-ATCCGGC ATTTTTTATAATGCC adk 590399 - 591043 + | adenylate kinase TERM 752 591103 - 591061 - g 84 -13.5 -3.05384 | overlap 591064 591101 TTTTCGCGTAGTGAA GCACTTATCAGGCCTGCTG TTATC CCGCAAGCCTGATAAGCGT AACGCCATCAGGCAA TERM 753 591100 - 591064 - g 86 -16 -2.75064 | overlap 591061 TCGCGTAGTGAAGCA CTTATCAGGCCTGCTG TTATC CCGCAAGCCTGATAAG CGTAACGCCATCAGG SC0530 591056 - 591262 + | hypothetical protein TERM 754 592202 - 592157 - g 74 -2.5 -5.00616 | opp_overlap 592163 592166, overlap 592160 GCGGGCGGTAAAAAA TATGCGTACATTCCGGCGCTG AACG CGACGCCGGAACATATTGATA TGATGCTGAAACTCA hemH 591272 - 592234 + | ferrochelatase aes 593202 - 592231 - | acetyl esterase TERM 755 593257 - 593239 - H 70 -2.3 -5.07053 | AACCATTGTAAAAAA CGCGGCT GGAGA AACTGCG ATCTCGTCGTCCGAT gsk 593310 - 594659 + | inosine-guanosine kinase ybaL 596384 - 594708 - | putative cation:proton antiport protein TERM 756 595352 - 595341 - G 77 -7.2 -4.30719 | opp_overlap 595340 TCCGGCGAGAATAAA GGCG AATT CGCC GATTTGCGCCAGGCT TERM 757 595553 - 595533 - G 89 -3.1 -5.65927 | opp_overlap 595547 595548, overlap 595536 595545 595546 GACGGAAACAAAAAA CAGGACGGC AAA GGCGTCGCG CAGCGGCAACGTATC TERM 758 595836 - 595853 + g 73 -5.5 -4.58395 | ATCGACCGTCAGCGA GGCTATG CCGA CATCGCC TTTTTCCACCATGCC fsr 597819 - 596599 - | MFS family transporter TERM 759 596917 - 596905 - G 76 -10.5 -3.75845 | TAAAACAAGGGTAAA CGGCG CGA CGCCG AGAATAGAGCCCCAA TERM 760 597170 - 597180 + g 74 -6.8 -4.30448 | CGCGGCAGCGGGTTA GCGA TTA TCGC TTTTGGCTTGCCTTT TERM 761 599172 - 599190 + G 70 -6.7 -4.15565 | gap 1, overlap 599181 TTCTGGCTGCGCAGA TCGCGCGC ACCG GCGC-CGA TTTTGGCGTGATGAG TERM 762 599364 - 599354 - g 71 -8.2 -3.89956 | GTAGCACAGATGAAA CCGG ACT CCGG CGCCTATCCACAGTT ushA 597992 - 599644 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor ybaK 600240 - 599761 - | hypothetical protein TERM 763 599976 - 599992 + g 75 -5.8 -4.56597 | opp_overlap 599950 GTTGCGCCACCATCG GGTCGG CCATA TCGACC TTTTTCGCGCCCAGA TERM 764 600415 - 600436 + r 100 -7.3 -5.96894 | overlap 600416 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTATTTCAAT TERM 765 600416 - 600435 + r 87 -10.8 -4.15696 | overlap 600415 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTATTTCAA ybaP 601236 - 600442 - | hypothetical protein TERM 766 601295 - 601281 - R 95 -12.8 -4.36914 | opp_overlap 601294 GCGCGTTGGAGAAAA GGGCGC AAT GCGCCC TGACGGGACGTCAAC TERM 767 602189 - 602178 - R 82 -3 -5.48825 | opp_overlap 602178 TATGATTCAAAAAAA CATT ATAA AATG TTGTTTTTTATTTTT TERM 768 602178 - 602189 + r 72 -3 -4.97159 | opp_overlap 602178 TATGATTCAAAAAAA CATT ATAA AATG TTGTTTTTTATTTTT TERM 769 602265 - 602296 + r 71 -10.2 -2.6436 | opp_overlap 602266 602268, overlap 602264 602263 ACTGATGGCTTAATA ATATATCAGGCAGC TGAT GCTGCCTGATAGAG ACTTTTTACGCTTTC TERM 770 602295 - 602266 - R 93 -13.7 -3.62597 | opp_overlap 602265 602264 602263, overlap 602268 CTGATGGCTTAATAA TATATCAGGCAGC TGAT GCTGCCTGATAGA GACTTTTTACGCTTT TERM 771 602293 - 602268 - R 100 -16.3 -3.39288 | opp_overlap 602265 602264 602263, overlap 602266 GATGGCTTAATAATA TATCAGGCAGC TGAT GCTGCCTGATA GAGACTTTTTACGCT copA 604803 - 602302 - | copper exporting ATPase TERM 772 603625 - 603660 + g 74 -4.5 -4.7254 | opp_overlap 603612, overlap 603627 GACGCTGCCGTCCTG GACGACGGTGCCGGC ATGAAC GCTGTCGCCTTCGCC TTTTTGCTGCGGAAT TERM 773 603771 - 603803 + g 76 -3.4 -5.04987 | gap 2, overlap 603786 TAGTGAGCCGCAGCA GCAT-CC-CTGGCTGA ACG TCCGCCAGCGGGACGC TTTTTTCGCCGTCTT TERM 774 604327 - 604338 + g 83 -7.2 -4.57073 | TTCAATCGCCTCTGT GCCG TAGC CGGC TTTTTCCACCGCCTG TERM 775 604953 - 604941 - g 95 -5.5 -5.40474 | ATGTGGCGAAAAAAA CCGGT TTA ACCAG CAAAGCCATTCGGTT cueR 604913 - 605329 + | DNA-binding transcriptional regulator CueR ybbJ 605782 - 605330 - | hypothetical protein ybbK 606696 - 605779 - | hypothetical protein ybbL 606843 - 607520 + | putative ABC transporter ATP-binding protein YbbL ybbM 607507 - 608286 + | YbbM family transport protein metal resistance protein TERM 776 608416 - 608393 - T 73 -9.5 -3.30441 | CAGTAGCGCGTACAA CTGGCGGCG GTATTT CGACGCCAG CGCATCGCCGGTGCC ybbN 609226 - 608372 - | paral putative thioredoxin protein ybbO 610056 - 609286 - | short chain dehydrogenase tesA 610858 - 610211 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 ybbA 610796 - 611482 + | putative ABC transporter ATP-binding protein YbbA TERM 777 611968 - 611978 + G 70 -6.8 -4.13767 | overlap 611959 611958 CAGGAGCCGGATTCC GGGT TTA ACCC TTTTCAGATGGCGCC TERM 778 612046 - 612029 - g 77 -4.1 -5.03314 | gap 1, opp_overlap 612044 CCGATGTGGAAAAAA CCGG-TGC GAT ACAGCCGG GGAGCCGCGTGATGT TERM 779 612198 - 612214 + G 70 -8.7 -3.64049 | overlap 612186 612209 612210 ATCGCTCGAACGTTC GCAGCAG TTT TTGCTGC TTTCGGCGTTATTAA TERM 780 613365 - 613391 + G 77 -8.1 -4.18018 | gap 2, opp_overlap 613379 613380, overlap 613365 TTCCGGGGCTCTGGA C-GGTCAACC-GC AAA GCTGGTTGACCAG TTTTCGCTGGGAGAA ybbP 611479 - 613893 + | hypothetical protein TERM 781 613910 - 613939 + F 85 -6.3 -5.14563 | opp_overlap 613910 613911, overlap 613911 613913 TCATGATGTGAATAA TTTCGCGCCGGTT TTTA AAACGGCGCGTAC TTTTTTAGTCGCACA TERM 782 613911 - 613938 + F 79 -9.8 -3.68256 | opp_overlap 613911 613910, overlap 613910 613913 CATGATGTGAATAAT TTCGCGCCGGTT TTTA AAACGGCGCGTA CTTTTTTAGTCGCAC TERM 783 613913 - 613936 + F 85 -12.4 -3.41701 | opp_overlap 613911 613910, overlap 613911 613910 TGATGTGAATAATTT CGCGCCGGTT TTTA AAACGGCGCG TACTTTTTTAGTCGC SC0550 614079 - 615212 + | putative outer membrane protein TERM 784 616166 - 616148 - g 71 -7.4 -3.95535 | overlap 616146 AGAACCTGAAAAATA TCATTGCG GTA CGCAGTGA AGATGCCGATAAGCC sfbA 615469 - 616299 + | putative ABC-type transport system ATPase component/cell division protein TERM 785 616419 - 616435 + G 70 -2.9 -4.6902 | overlap 616421 TGATGTGAGCCTGCA TATTGCC GCG GGCGAGA TTTTTGGCATTGTCG TERM 786 616487 - 616472 - g 81 -6.8 -4.72272 | GCGGCGCAGGAAAAA GCACGC TGCT GCGTAC CCTGAACGCCTTAAC TERM 787 617306 - 617280 - g 71 -10.2 -3.29043 | gap 1, overlap 617285 AACCGCGCCGCATAA TCCAACGGCGG TGGCCG CCGCCG-TGGA GCATATCCGTCAACG TERM 788 617299 - 617285 - g 83 -12.8 -3.23274 | overlap 617280 CGCCGCATAATCCAA CGGCGG TGG CCGCCG CCGTGGAGCATATCC sfbB 616336 - 617352 + | putative ABC-type transport system ATPase component/cell division protein TERM 789 617426 - 617445 + G 70 -3.4 -4.73912 | overlap 617430 617442 ACGGTGCTGGCGATT CTTGGCGG TCTA CCGCTCGG TTTTCTGATTTTTGT TERM 790 617442 - 617453 + G 72 -2.2 -4.83615 | overlap 617426 TTGGCGGTCTACCGC TCGG TTTT CTGA TTTTTGTCACCGATC TERM 791 617474 - 617490 + G 82 -5.1 -5.06016 | overlap 617476 GTCACCGATCGTCAT CTGTTCT GGC AGAACCG TTTTATTTATCTCGT TERM 792 617605 - 617647 + G 100 -13.3 -4.3739 | overlap 617607 GGGCAATACGATTGG CCCGATTGCAGCCTCCGTC CCGCT GTCGGTGGCCGCAATCGCG TTTTATGCACGCCTG TERM 793 617607 - 617645 + G 81 -14.5 -2.52946 | overlap 617605 GCAATACGATTGGCC CGATTGCAGCCTCCGTC CCGCT GTCGGTGGCCGCAATCG CGTTTTATGCACGCC sfbC 617345 - 618004 + | putative binding-protein-dependent transport systems inner membrane component ybbB 619137 - 618043 - | tRNA 2-selenouridine synthase TERM 794 618082 - 618105 + g 100 -11 -5.27923 | AACGTCTTGCCATGG GCCGCGAAAA ACGA TATTCGCGGC TTTTTTCTCCAGTTG TERM 795 619101 - 619119 + g 76 -3 -5.09685 | TATCGGCAAGGAGGA GCGCGCGA TAG TCCTGTGC TTTTTGTCTGTCTTG ybbS 620133 - 619171 - | DNA-binding transcriptional activator AllS allA 620360 - 620842 + | ureidoglycolate hydrolase TERM 796 620867 - 620881 + F 71 -7.2 -4.12254 | opp_overlap 620865 620867 CCTTCTTGCATAAGA TGAACA TAT TGTTCA TTGTTTATGCTCATA allR 620921 - 621739 + | DNA-binding transcriptional repressor AllR TERM 797 621745 - 621766 + F 100 -10.1 -5.16472 | overlap 621746 TGTAGCCTGAGCCGC ATCCCGCTC GCTG GAGCGGGAC TTTTTTAAAATTTTT TERM 798 621746 - 621765 + F 100 -13.6 -3.67443 | overlap 621745 GTAGCCTGAGCCGCA TCCCGCTC GCTG GAGCGGGA CTTTTTTAAAATTTT gip 623626 - 624402 + | hydroxypyruvate isomerase TERM 799 624986 - 624967 - g 74 -2 -5.09895 | overlap 624969 624970 CATCCAGGGAAAAAA TATCACCC TGGT GGGCGGCA ATGGGGATGGGCAAA glxR 624503 - 625381 + | tartronic semialdehyde reductase TERM 800 625387 - 625412 + F 78 -11.9 -3.01712 | opp_overlap 625385 ATTGTCCTAATTATG TGTATCGCTGC GGCT GCAGCGATACC TGTTCACAAGGAACA TERM 801 626684 - 626668 - g 91 -7.3 -5.01422 | TTATATAAAAAGAAA GCAACAC AAC GTATTGC TTCAGCTTAAAAATA yhjE 625447 - 626694 + | putative permease TERM 802 627154 - 627179 + G 70 -3.3 -4.71463 | gap 1 TTATGTGGTTCGGCT TGC-AGTGTTAC GCG GGAACGCTGGCA TTTCTTATTTTGATT allP 626790 - 628244 + | allantoin permease TERM 803 628426 - 628411 - g 75 -6.1 -4.58395 | TCCAGGGCGGAAAAA TCGCC GCGATT GGCGA GAACCTGGAGGAAGC TERM 804 628681 - 628696 + G 71 -6 -4.24422 | opp_overlap 628672 AATTGACCATCGACG CCGCGC AGTT GGGCGG TTTGGTTTCTTATAA TERM 805 629410 - 629433 + G 70 -3 -4.8048 | opp_overlap 629413 629414, overlap 629413 CGATGTTTGGCAAAT TAATGGCGAC CAAC GCCGCCGATA TTTTTGGTCTGAAAC allB 628323 - 629684 + | allantoinase TERM 806 629700 - 629720 + F 100 -16.9 -3.83378 | opp_overlap 629700, overlap 629693 TCCGGTGTGATTTAA TGCCCGTCG TCA CGACGGGCA TTCTCTATTTTAAGG TERM 807 629720 - 629700 - f 100 -16.9 -3.05384 | opp_overlap 629700 629693 TCCGGTGTGATTTAA TGCCCGTCG TCA CGACGGGCA TTCTCTATTTTAAGG TERM 808 629911 - 629925 + G 83 -10 -4.08767 | ACCACCGCGTTGGCC TGCCTG GTT CAGGCA TTTTGCGGCCATCGC ybbY 629743 - 631041 + | putative purine permease YbbY glxK 631064 - 632212 + | glycerate kinase II TERM 809 632243 - 632224 - T 100 -13.6 -5.71983 | TTAAGCATAAAAAAA GCCACGGT TCTC ACCGTGGC AAAATCCAACATAGC ylbA 633077 - 632292 - | hypothetical protein allC 634323 - 633088 - | allantoate amidohydrolase allD 635394 - 634345 - | ureidoglycolate dehydrogenase TERM 810 636479 - 636467 - g 70 -9.1 -3.73042 | opp_overlap 636467 636466, overlap 636465 GCGCGGATGAAAAGA GCCAG GTG CTGGC CTTTGTCTCCAAACC fdrA 635710 - 637374 + | membrane protein FdrA ylbE 637384 - 638643 + | putative cytoplasmic protein ylbF 638655 - 639464 + | putative cytoplasmic protein arcC 639468 - 640361 + | carbamate kinase purK 641469 - 640402 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 811 641200 - 641217 + g 72 -2 -4.96848 | CGCGGTCGCGAGTCC CAGTTT ATCGAA AAGCTG TTTTTGTGTCAGACG purE 641975 - 641466 - | phosphoribosylaminoimidazole carboxylase catalytic subunit lpxH 642815 - 642093 - | UDP-2,3-diacylglucosamine hydrolase TERM 812 642247 - 642260 + g 74 -4.5 -4.81249 | overlap 642235 TGACCGTGAACCAGC CACTG TACG CGGTG TTTTTCCATTTCGGC TERM 813 642778 - 642745 - G 100 -11.1 -5.03314 | gap 1, opp_overlap 642754, overlap 642747 642754 TCTACGGCTAAAAAA CGCAGAAAACCGGCGA CGA TCGCCGGTTCT-TCCG TTTGCAGATGCAAGT TERM 814 642778 - 642747 - G 83 -14.6 -2.76422 | gap 1, opp_overlap 642754, overlap 642745 642754 TACGGCTAAAAAACG CAGAA-AACCGGCGA CGA TCGCCGGTTCTTCCG TTTGCAGATGCAAGT TERM 815 642770 - 642754 - G 100 -13.7 -4.58242 | opp_overlap 642754, overlap 642745 642747 AAAAAACGCAGAAAA CCGGCGA CGA TCGCCGG TTCTTCCGTTTGCAG TERM 816 642754 - 642770 + g 93 -13.7 -3.77832 | opp_overlap 642754 642745 642747 AAAAAACGCAGAAAA CCGGCGA CGA TCGCCGG TTCTTCCGTTTGCAG ppiB 643312 - 642818 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 817 643069 - 643079 + g 73 -5.4 -4.58283 | GTGCCATTGCCAACG TACC ACG GGTA TTTTTCAGACCATTG cysS 643485 - 644870 + | cysteinyl-tRNA synthetase TERM 818 644880 - 644909 + T 100 -9.3 -6.04324 | AAGTAAGCGCTTTTA CAGGCCGCTCTAT TTGC ATAGAACAGCCTG TTTTTTATTTTTTCG SC0577 645738 - 644914 - | putative outer membrane protein SC0578 646172 - 645735 - | putative inner membrane protein TERM 819 645792 - 645812 + g 82 -5.3 -5.0538 | opp_overlap 645793, overlap 645794 GTCCTGATTTACCAT ATGGGCAAG GAC CTTGCCCTC TTTTTTCAAATAAGC TERM 820 645794 - 645810 + g 91 -12.3 -4.15748 | opp_overlap 645793, overlap 645792 CCTGATTTACCATAT GGGCAAG GAC CTTGCCC TCTTTTTTCAAATAA TERM 821 645827 - 645844 + g 77 -4 -5.02074 | opp_overlap 645827 CTTTTTTCAAATAAG CGCCGG TGCCTT CCTGCG TTTTTTCCAGAGTGA ybcI 646710 - 646165 - | putative membrane-bound metal-dependent hydrolase TERM 822 646830 - 646797 - R 78 -12.5 -2.75307 | gap 1, opp_overlap 646797 646797, overlap 646788 646786 646807 AAGACAGCGTAATCA GGCCGGATAA-GACGC TTT GCGTCGCTATCCGGCA CTTGTATCAGGCCAC TERM 823 646797 - 646830 + r 71 -10.3 -2.68823 | gap 1, opp_overlap 646788 646786 646797 646807, overlap 646797 AAGACAGCGTAATCA GGCCGGATA-AGACGC TTT GCGTCGCTATCCGGCA CTTGTATCAGGCCAC TERM 824 646797 - 646831 + r 75 -10.1 -3.48276 | gap 2, opp_overlap 646788 646786 646797 646807, overlap 646797 AAGACAGCGTAATCA G-GCCGGATA-AGACGC TTT GCGTCGCTATCCGGCAC TTGTATCAGGCCACG TERM 825 646819 - 646807 - R 70 -9.1 -3.30619 | opp_overlap 646797 646797, overlap 646797 646788 646786 AATCAGGCCGGATAA GACGC TTT GCGTC GCTATCCGGCACTTG ybcJ 647049 - 646837 - | hypothetical protein folD 647917 - 647051 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 826 647082 - 647096 + g 70 -7.1 -4.18494 | opp_overlap 647080 647084 TCGTGATATTCAATG CACGC CTGCA GCGTG TTTTCGATAAGCGTG TERM 827 648737 - 648753 + G 74 -7.9 -4.08706 | opp_overlap 648731 648732, overlap 648732 GATCCGAAAGTGGCG GCCACCG CTG CCGTGGC TTTCTCTGGTCAGGC fimA 648395 - 649018 + | major type 1 subunit fimbrin (pilin) TERM 828 649385 - 649403 + G 70 -3 -4.82901 | overlap 649387 TTTGCTGGCGTTACG CCTGCGGA AGA TCCCCATG TTTTTCTGGCCAGCG fimI 649094 - 649627 + | fimbrial protein internal segment TnpR 651166 - 649958 - | transposase of Tn10 TERM 829 651882 - 651892 + G 70 -6.8 -4.11295 | overlap 651877 651888 TCGGCGGATACCGCG TCCG TGG CGGA TTTATCTCGCTTTGA fimD 651732 - 654350 + | outer membrane usher protein fimH 654365 - 655372 + | minor fimbrial subunit fimF 655382 - 655900 + | putative fimbrial protein fimZ 656671 - 655946 - | transcriptional regulator FimZ TERM 830 656060 - 656070 + g 73 -5.4 -4.67607 | opp_overlap 656060 GTTACTCAATAAAAG TTGC TCG GCAA TTTCTTTGTTAGACA fimY 657904 - 657182 - | putative regulatory protein fimW 658993 - 658397 - | putative fimbrial protein TERM 831 658883 - 658912 + gH 90 -13.7 -3.33696 | overlap 658877 ATTATCTATCTCTTC TGGCGGCAGAAAG TCAA TTTTCTGCTGCCA TTGATTCGCCAGACG SC0591 658967 - 659185 + | hypothetical protein rfbI 660997 - 661359 + | putative glycosyl translocase yfdH 661356 - 662282 + | putative glycosyltransferase SC0594 662279 - 663865 + | hypothetical protein TERM 832 665123 - 665144 + T 79 -10.1 -3.74693 | TTTATTATTGAGGTC GGTGACCGC CTGA GCGATCACC TTTAATACAGTGGCA SC0595 666647 - 665193 - | hypothetical protein TERM 833 666551 - 666541 - G 80 -5.4 -4.85782 | GCTTCTAAAAATAAA GATG CTC CATC AGATGTAACTGGGTT yfdH 667563 - 666637 - | putative glycosyltransferase rfbI 667922 - 667560 - | putative glycosyl translocase TERM 834 668102 - 668139 + H 93 -10 -4.58395 | opp_overlap 668106 668110, overlap 668105 GGGACAAAAACGGTA CACACAAAGCTTTGCA TCGGCT TGCAAAGCTTTGCATG TTTTTCGAAGATGGG TERM 835 668105 - 668136 + H 73 -10.3 -2.93975 | opp_overlap 668106 668110, overlap 668102 ACAAAAACGGTACAC ACAAAGCTTTGCA TCGGCT TGCAAAGCTTTGC ATGTTTTTCGAAGAT TERM 836 668135 - 668106 - H 85 -13.8 -2.96009 | opp_overlap 668105 668102, overlap 668110 CAAAAACGGTACACA CAAAGCTTTGCA TCGGCT TGCAAAGCTTTG CATGTTTTTCGAAGA TERM 837 668131 - 668110 - H 79 -8.8 -4.13648 | opp_overlap 668105 668102, overlap 668106 AACGGTACACACAAA GCTTTGCA TCGGCT TGCAAAGC TTTGCATGTTTTTCG SC0598 668351 - 668575 + | hypothetical protein cusS 669119 - 668790 - | sensor protein TERM 838 668834 - 668824 - G 74 -2.4 -5.10163 | AATGTCAAAATAAAA CGAG TAG CGCG CGTATCGGAGGTGAC ykgD 670264 - 669410 - | AraC/XylS family transcription factor TERM 839 669647 - 669628 - G 70 -10 -3.35224 | gap 1, overlap 669626 ACACGTCGCGAAATA GCTGGGCGA AGC TCGCCC-GC GACATGTGTACCCGT TERM 840 671197 - 671186 - g 74 -7.2 -4.1021 | CGGTACAAGTAGAAA CGCC GGAA GGCG CGCATCTTGTGGATG ykgC 670480 - 671805 + | pyridine nucleotide-disulfide oxidoreductase TERM 841 671821 - 671837 + F 100 -9.4 -5.83822 | opp_overlap 671818 671821 AACATAAATAACGTA GCCCTG TTAAT CAGGGC TTTTTTTTGCCTGTC TERM 842 671890 - 671865 - f 71 -3.9 -4.85599 | overlap 671867 GTCAGGCTATAAAAA TACGCCAGGAC AAAT ATGCTGGCGTC TGAAAGAAAAGGCTT TERM 843 672002 - 672012 + G 81 -8.2 -4.2349 | CTTCATTATTGGCTG CGCC GCT GGCG TTTTCCGTCTCCGCC ykgI 671962 - 672198 + | putative periplasmic protein ykgB 672211 - 672771 + | hypothetical protein TERM 844 672795 - 672834 + T 77 -10.9 -3.19463 | gap 2, overlap 672801 TTACCCTCTTTATGC CGCGATTCGTCGGGTGGCG CTTG CGCCATCCGAC-AAT-GTG TTGATGAATGATGGA TERM 845 672801 - 672830 + T 90 -14.3 -3.13867 | overlap 672795 TCTTTATGCCGCGAT TCGTCGGGTGGCG CTTG CGCCATCCGACAA TGTGTTGATGAATGA SC0604 674025 - 672850 - | hypothetical protein TERM 846 673173 - 673194 + g 84 -3 -5.33026 | gap 1, overlap 673175 673176 GCCGCGCCTGATTAA GCTGTACCA TCATC TGGTGC-GC TTTTTCTTTCAATTC TERM 847 674494 - 674528 + G 78 -7.1 -4.66987 | gap 1, opp_overlap 674514, overlap 674496 CGGACTGTTTCTGGG CA-TCGGCCCGGCGAT TCAA ATGGCGGGGCCGGCTG TTTTGTTGGGCTATG TERM 848 674649 - 674662 + G 75 -3.7 -4.84359 | CCTGGAAATATTGGG GGCCG TTTG CGGGC TTTTTGTCGGGCTGG pheP 674351 - 675745 + | phenylalanine transporter TERM 849 675751 - 675782 + T 90 -16 -2.56596 | opp_overlap 675746, overlap 675747 GGCTCATTAACTTTT TTGCCCGATCCCAT GCTC ATGCGATCGGGCAA TCCATTAATGGCGCA ybdG 677034 - 675787 - | hypothetical protein TERM 850 676171 - 676188 + g 72 -4.1 -4.78107 | gap 1, opp_overlap 676156, overlap 676156 676172 CGGCTTTAACAGTTG C-GCGGTT AAC AGCCGCTG TTTTTCATCATCATC TERM 851 676172 - 676186 + g 71 -7.8 -4.00443 | opp_overlap 676156, overlap 676156 676171 GGCTTTAACAGTTGC GCGGTT AAC AGCCGC TGTTTTTCATCATCA TERM 852 677073 - 677052 - H 71 -8 -3.85698 | opp_overlap 677069 TCTCTCCTTTATAAA CAGCAGCC TATGAT GACTGCTG AATGGCATTTATGCA SC0607 677064 - 677246 + | hypothetical protein TERM 853 679006 - 678984 - g 71 -10.6 -3.3071 | overlap 678985 ATACCAGTACATCAA TGCGTTTTGG CGA CCAAAACGCC CATTCGCAGGTGGGT TERM 854 679005 - 678985 - g 81 -14.1 -2.57944 | overlap 678984 TACCAGTACATCAAT GCGTTTTGG CGA CCAAAACGC CCATTCGCAGGTGGG apeE 677345 - 679315 + | outer membrane N-acetyl phenylalanine beta-naphthyl ester-cleaving esterase TERM 855 679373 - 679385 + T 80 -6.9 -4.56607 | opp_overlap 679373 ATCGTAGGCGCAAAC CGGTG TCA CGCCG TTTTCTCCTTCATCC TERM 856 679568 - 679551 - T 100 -12.7 -5.1361 | AGAAAGGTGAAAAAA GCCGGAC GGGC GTCCGGC TTAGGCAGGGGATTA nfnB 680234 - 679581 - | dihydropteridine reductase TERM 857 680037 - 680048 + g 71 -5.8 -4.25104 | GTTGAACGTGTAGTT TCCG GCAG CGGA TTTTGCTACGCGCGC ybdF 680699 - 680331 - | hypothetical protein SC0611 681280 - 680699 - | putative regulatory protein TERM 858 680788 - 680756 - G 76 -12.1 -3.08813 | gap 1, opp_overlap 680755 680749 680772 TCCCAGCGCAATATA TTCGCCA-GCGCGA GCGGGA TCGCGCGCGGCGAA ATCCATTGTTGTTTC TERM 859 680842 - 680821 - G 72 -2.1 -4.84359 | gap 1, overlap 680822 680823 CCAGCGCCAGAAAAA GGCCGTCGCC GAA GGCG-CGGTA CTCATCCGACATAAA TERM 860 681322 - 681308 - H 80 -7.2 -4.57569 | overlap 681318 681321 TTATGTCTGTAAAAA CATGAT TGA ATCATG CCCGTTGTCGCGTCG TERM 861 681459 - 681447 - H 72 -5.5 -4.4017 | TGAAGTGGTAGAAAA GCCTA TTG CAGGC CATGCGATAAGCCGT TERM 862 681678 - 681692 + G 74 -2.7 -4.85599 | CGGGGTATTCCAAGT GGCAC CTGCA GCGCC TTTTTATGCAGTACA ramA 681569 - 681910 + | putative regulatory protein ybdJ 682164 - 681916 - | hypothetical protein ybdK 683349 - 682231 - | carboxylate-amine ligase entD 684065 - 683361 - | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex fepA 686366 - 684111 - | outer membrane receptor FepA TERM 863 685023 - 685053 + g 77 -8.3 -4.07568 | overlap 685019 685016 685026 ACGTAGCCCCGGCGT CAGCATGGTGCTG TCGGT CAGTTCCATGTTG TTTTCAGCAAACAGA TERM 864 685437 - 685451 + g 77 -7.8 -4.24963 | opp_overlap 685439, overlap 685428 GTAGTTCTGCCGATA GAGGCG GTT CGTCTC TTTTCCGTAATTATC TERM 865 686559 - 686532 - H 79 -2.8 -5.36441 | CTTTTATATAAAAAA TTCATAATAAAC AAAT GGTTATAATGAA AGAAGCGCTGGCAAC TERM 866 687331 - 687284 - g 76 -12 -3.1355 | gap 1 GCGATTGATACTCAA CACCG-CAGCCAGGAGTTGCCCT GCA ATGCCGACTTCTGGCTGGCGGTG CAGCAGGAACTGTTG fes 686546 - 687769 + | enterobactin/ferric enterobactin esterase ybdZ 687800 - 688018 + | hypothetical protein TERM 867 688649 - 688681 + G 72 -12 -2.55712 | gap 2, overlap 688648 688647 CGGCGTCAATTTCTG CCGCGC-CGCTG-CCG GGG CGGTCGGCGAGTGCGG GTATTCTGCGTATGA TERM 868 689377 - 689357 - g 75 -11.1 -3.41325 | opp_overlap 689376, overlap 689355 CACACCTTAATAATA CGGCGGTAA CGA TTCCCGCCG CCACGCTTAGCGATT TERM 869 689427 - 689417 - g 74 -2.4 -5.03715 | AGCAGGCGCAAAAAA CGCC AGA GGCT TCCGCGTTGGCAGAT TERM 870 689536 - 689560 + G 75 -4.1 -4.87786 | overlap 689537 689538 689540 CAGCCTGGTGATAGC GTGGCGGTGGC GTT GCCACGGTCGG TTTTTCTGACCTTAG TERM 871 690151 - 690169 + G 75 -6.7 -4.52589 | opp_overlap 690150, overlap 690133 690152 TCGGCTGGGAAAAGC TGCGCTT CCTTA AAGCGCG TTTTCTGTAGCGGCG TERM 872 691461 - 691494 + G 71 -4.5 -4.67904 | gap 1, opp_overlap 691457 GGCGCAAGGGATCGC CGCC-CGGTTGCGC GCGCGCG GCGAAACGGTGGCG TTTTTGGGGTTACTG TERM 873 691563 - 691549 - g 78 -7.1 -4.57341 | AACTGGCGGGAAAAA GAGGC GAATG GCCTC AATCCGGACGTATTG entF 688015 - 691899 + | enterobactin synthase subunit F TERM 874 691939 - 691965 + F 100 -11.1 -5.45652 | opp_overlap 691939 AATTAAATCCTGAAA CCCATAATAAT GACTA ATTATTATGGG TTTTTTATTGCAACT TERM 875 691965 - 691939 - f 82 -11.1 -3.65084 | opp_overlap 691939 AATTAAATCCTGAAA CCCATAATAAT GACTA ATTATTATGGG TTTTTTATTGCAACT TERM 876 692803 - 692789 - g 83 -7.8 -4.55128 | AGCTGGAAATCAAAA CCCGCT ATG AGCAGG AAAAGCTGGCGATGG fepE 692122 - 693285 + | ferric enterobactin transport protein FepE TERM 877 693318 - 693298 - T 89 -11.2 -4.14739 | opp_overlap 693298 TGATTTACCCGAAAA GCCGGATA GCGAT TATCCGGC TTTGTCATCTGTGTG TERM 878 693298 - 693318 + T 95 -11.9 -4.05389 | opp_overlap 693298 TGATTTACCCGAAAA GCCGGATAG CGA TTATCCGGC TTTGTCATCTGTGTG fepC 694133 - 693339 - | iron-enterobactin transporter ATP-binding protein fepG 695122 - 694130 - | iron-enterobactin transporter permease TERM 879 694314 - 694265 - G 70 -9.3 -3.75024 | gap 2, opp_overlap 694266 GGCCAGTAGTAATAA TGCGCCGCACAGCGCCGACTGGG TTAATC CCCAG-CG-CGCTGTGCCGCTAA GACGGCGGGCGATGT TERM 880 694904 - 694888 - G 74 -4.3 -4.7078 | overlap 694877 694890 TCAACGACTGAAAAA TCGCGCC ACT GACGCCA AGCGCAGCGCCAATC fepD 696126 - 695119 - | iron-enterobactin transporter membrane protein TERM 881 695776 - 695766 - G 74 -6.8 -4.29432 | TAAATGCCATGAAAA GCTG TTC CAGC GGCGTGGAGAAACCA ybdA 696237 - 697481 + | enterobactin exporter EntS fepB 698500 - 697544 - | iron-enterobactin transporter periplasmic binding protein TERM 882 698136 - 698107 - G 77 -11.4 -3.60805 | gap 1 AGAGCTGATCGTAAA GCGCCAGC-GCGG AGTCG CCGCCGGTGGCGC TAATCAAAATGAGAT entC 698809 - 699984 + | isochorismate synthase TERM 883 700712 - 700729 + G 74 -4.7 -4.82901 | ACTACGCCATGAGTT CGCCGGG CGCG CTGGGCG TTTTTCTCGCCAAAG TERM 884 701204 - 701219 + G 74 -3.2 -4.87626 | opp_overlap 701197 TACACAATGCCAGCG CCTTTG ACGC CAACGG TTTTTACTGTTCCGG TERM 885 701589 - 701569 - g 76 -5.4 -4.72201 | overlap 701572 GTCGATAAAAAACAA TTACGCCA GCGGT TGGCGTCA CGTTCACCGCTCTGA entE 699994 - 701604 + | enterobactin synthase subunit E entB 701618 - 702475 + | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase TERM 886 702982 - 703034 + G 100 -13.6 -3.92869 | CTGGCGGGCTGTGGG GTGCGCTGTAATGT-GGTGTCGCCCG GTT CGACCGACACCGATAT-GCAGCGCAC TTTATGGGTGAGTGA entA 702475 - 703230 + | 2,3-dihydroxybenzoate-2,3-dehydrogenase ybdB 703233 - 703646 + | hypothetical protein cstA 703828 - 705927 + | carbon starvation protein TERM 887 705943 - 705969 + F 72 -9.4 -3.6502 | opp_overlap 705942 705944, overlap 705944 TCTTTTTACATCAAT AGCCCTCTCC AGAATAA GGAGAGGGCA TTTGGATGACAGGTG TERM 888 705968 - 705944 - f 83 -12.9 -3.19602 | opp_overlap 705944 705943, overlap 705942 CTTTTTACATCAATA GCCCTCTCC AGAATAA GGAGAGGGC ATTTGGATGACAGGT TERM 889 705944 - 705968 + F 82 -12.9 -2.78798 | opp_overlap 705942 705944, overlap 705943 CTTTTTACATCAATA GCCCTCTCC AGAATAA GGAGAGGGC ATTTGGATGACAGGT ybdD 705991 - 706188 + | hypothetical protein ybdH 707312 - 706224 - | hypothetical protein TERM 890 706487 - 706499 + g 70 -3.4 -4.81249 | overlap 706496 CATAAGCTACTTTCG TTCC GTGCA GGAA TTTTTCCGTTTGCGG TERM 891 708272 - 708250 - g 76 -11.9 -3.01712 | opp_overlap 708248 CGTTTTGCGTCAATA CGCCGGCGC AACTG GCGCTGGCG GATATGCTGCGCGCC ybdL 707403 - 708599 + | putative aminotransferase ybdM 709217 - 708600 - | hypothetical protein TERM 892 708627 - 708661 + gT 71 -10.1 -3.24232 | opp_overlap 708608 708627, overlap 708625 708622 708631 CCACGCTCTGGAGAA TCGACGGTCTGCA AAAAGCTCC TGCAGGCCGTTGA TCTGTTTCAGGCGCA TERM 893 708661 - 708627 - GT 71 -10 -3.29144 | opp_overlap 708627 708625 708622 708631, overlap 708608 CCACGCTCTGGAGAA TCGACGGTCTGCAAAA AGC TCCTGCAGGCCGTTGA TCTGTTTCAGGCGCA ybdN 710425 - 709190 - | putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase TERM 894 709395 - 709411 + gr 85 -2.2 -5.55769 | CCATGCTGCGTTTGT GGAATG GTGTG CATGCC TTTTTTCTTATACCA TERM 895 709933 - 709954 + gr 70 -2.8 -4.82901 | opp_overlap 709933 CGTCGGAACGAATAC CGACCAGC ATAGCG GCAGGACG TTTTTCTGAAAACCA TERM 896 710171 - 710160 - GR 74 -2.2 -5.10461 | GCGACCCAATAAAAA CGCT CAAT AACG TCCGCGTAGTATTCA ybdO 711493 - 710591 - | LysR family transcriptional regulator TERM 897 710785 - 710760 - G 74 -2.5 -5.00616 | overlap 710767 GTTTGTGGTAAAAAA CCAATAAGCTC CGTG GAGCTGATAGA GTTGGCGATGGTCAT TERM 898 711505 - 711536 + r 74 -10.3 -3.28684 | opp_overlap 711512, overlap 711512 CCATAGTATGTTCCC GGCATAATCATGG TATCTT CCATGATTATGAC TTAATCTCAATAATT dsbG 712556 - 711810 - | disulfide isomerase/thiol-disulfide oxidase TERM 899 712823 - 712841 + H 100 -16 -5.00138 | opp_overlap 712820 TAGTTCAGGTAATGG GGCCGCCT GTC AGGCGGCC TTTTTACTTTAGATG TERM 900 712886 - 712896 + H 72 -8.2 -3.81414 | GTGTTCACAATGTCG CCCG AAT CGGG TTGTTAGTTAACGCT TERM 901 713072 - 713050 - g 95 -10.6 -4.57569 | CCAGGCGTTCAAAAA CGGTGAATTC ATT GAAGTCACCG AGAAAGATACCGAAG ahpC 712997 - 713560 + | alkyl hydroperoxide reductase subunit C TERM 902 713697 - 713714 + F 95 -12.7 -4.05788 | AAATTGTTTCAGTCA TGGGCGC ACCC GCGCCCA TTTCATTTCAGCACC TERM 903 715093 - 715134 + G 74 -2.9 -4.8543 | gap 1, overlap 715094 GGCTGGAGTATCGTG ACCGTGTCAGCGGCGATATT CAT AGCGTCGC-GCTGGCAGGGA TTTTTGTGCAGATTG ahpF 713802 - 715367 + | alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides TERM 904 715445 - 715482 + F 74 -8.6 -3.86312 | GCTATTCGGGCCTGC GGTGTTTATGCCTGG-GG AACG CCACCGGGTA-AAACACC TTCTTCATTATCAAT TERM 905 715527 - 715507 - f 93 -14.1 -3.61328 | opp_overlap 715507 ATCAATACTCTGAAA CCGTCTGTT AAT AACAGACGG TTTTTTATTTCAACG TERM 906 715507 - 715527 + F 100 -14.1 -5.63517 | opp_overlap 715507 ATCAATACTCTGAAA CCGTCTGTT AAT AACAGACGG TTTTTTATTTCAACG SC0641 715700 - 716260 + | hypothetical protein TERM 907 716276 - 716287 + G 80 -4.4 -5.00884 | TGAGACGGGACATCT GAAC AGAC GTTC TTTTTTAAAGGGGAT TERM 908 717729 - 717700 - g 73 -9.3 -3.90291 | gap 1, overlap 717710 AGTTCTTCAACGAAA CGGTGCAACACGCT GAT ATCGTGCTGC-CCG TTACCACCGCGTTTG TERM 909 718040 - 718005 - g 82 -5.4 -5.0133 | GACGGGCCGAAAAAA GCGATCCTGCCAAG TTCTGCCG CCTGGTACGATCGC AAGTTCAAAACGCCG TERM 910 718107 - 718097 - g 74 -4.6 -4.83169 | overlap 718098 ACTGGCGGAGAAAAA CGGC CAC ACCG CGCTGCCGGAATACA yyaE 716253 - 718532 + | putative oxidoreductase protein dmsB 718529 - 719086 + | putative hydrogenase protein ynfH 719086 - 719853 + | putative hydrogenase protein TERM 911 719864 - 719904 + T 84 -8.2 -4.59773 | opp_overlap 719871, overlap 719865 719868 ACTAACGATGATGCA GTAAAAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTGTCAG TTTTTAGCCATCAGG TERM 912 719865 - 719903 + T 82 -11.7 -3.35542 | opp_overlap 719871, overlap 719864 719868 CTAACGATGATGCAG TAAAAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTGTCA GTTTTTAGCCATCAG TERM 913 719868 - 719900 + T 82 -13.4 -2.84171 | opp_overlap 719871, overlap 719865 719864 ACGATGATGCAGTAA AAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTG TCAGTTTTTAGCCAT TERM 914 719897 - 719871 - T 100 -20.2 -4.75372 | opp_overlap 719868 719865 719864 ATGATGCAGTAAAAA GCCCTGCCAGGC GTG ACCTGGCAGGGC GTGTCAGTTTTTAGC ybdQ 720349 - 719921 - | putative universal stress protein UspA and related nucleotide-binding protein TERM 915 720934 - 720950 + r 71 -7.9 -3.99678 | opp_overlap 720932, overlap 720937 ATAAAAAACAGATCC CACCGCC GGC GGCGCTG TTTGGTTATAGCCAT TERM 916 721129 - 721115 - R 72 -2.8 -5.02074 | GCAGGCGGCAAAAAA TGCTCA GAT TCAGCA AGGTTCCTGCGTGGC TERM 917 721492 - 721507 + r 84 -8.2 -4.64334 | overlap 721470 GCGTGGTCAGCGTGC CCGGCG TGTA TGCCGG TTTTATTCACGGCTT TERM 918 721576 - 721564 - R 73 -7.7 -4.14392 | opp_overlap 721564 GGCTAACTTTTAAAA TGGGT CAA ACCCA TGTTCACGCGTGGCT TERM 919 721861 - 721842 - R 93 -12.2 -3.75897 | opp_overlap 721842 721844 721858 721860 AAGGGCTAACGGAAA GAGGATGC GCAG GCATCCTC TGTGTAAACGCATTA TERM 920 721842 - 721861 + r 79 -12.2 -2.87881 | opp_overlap 721842, overlap 721844 721858 721860 AAGGGCTAACGGAAA GAGGATGC GCAG GCATCCTC TGTGTAAACGCATTA rnk 722304 - 721894 - | nucleoside diphosphate kinase regulator TERM 921 722363 - 722385 + r 86 -11.2 -3.72968 | opp_overlap 722363 GGTCCCAAAAGAAAA CCCTCACCGT CTG GCGGCGAGGG TTTAACTCTCATGAT TERM 922 722385 - 722363 - R 100 -12.7 -5.07652 | opp_overlap 722363 GGTCCCAAAAGAAAA CCCTCACCG TCTGG CGGCGAGGG TTTAACTCTCATGAT TERM 923 723221 - 723210 - R 71 -3.6 -4.82901 | opp_overlap 723194 TGGCTTTGACAAAAA CCGG TTTG CCAG GAAAGCGCCAGCACA TERM 924 723399 - 723430 + r 80 -7.2 -4.63184 | opp_overlap 723402, overlap 723400 723402 CCATTTAATCATAAA AAATGCCGCTCAGG TGAA CCTGAACGGCATCA TTTTTAACCTACGTT TERM 925 723400 - 723429 + r 77 -10.7 -3.37188 | opp_overlap 723402, overlap 723399 723402 CATTTAATCATAAAA AATGCCGCTCAGG TGAA CCTGAACGGCATC ATTTTTAACCTACGT TERM 926 723427 - 723402 - R 100 -15.5 -5.37345 | opp_overlap 723400 723399 723402 TTTAATCATAAAAAA TGCCGCTCAGG TGAA CCTGAACGGCA TCATTTTTAACCTAC TERM 927 723402 - 723427 + r 83 -13.3 -3.25166 | opp_overlap 723402, overlap 723400 723399 TTTAATCATAAAAAA TGCCGCTCAGG TGAA CCTGAACGGCA TCATTTTTAACCTAC citT 724919 - 723456 - | DASS family citrate:succinate transporter TERM 928 724356 - 724345 - G 71 -7.2 -4.05208 | overlap 724346 ATCCACATCAAATAA CCGC CGAT GCGG CGTGCGGAAGGATCG TERM 929 724550 - 724536 - G 70 -3.4 -4.74801 | overlap 724538 GAATTTTACCAAAAA CAGCGC AAT GCGGCG CCCCAGCTCGGTCAC citG 725853 - 724957 - | triphosphoribosyl-dephospho-CoA synthase citX 726376 - 725825 - | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase citF 727909 - 726380 - | citrate lyase alpha chain/citrate-ACP transferase TERM 930 727024 - 727035 + g 75 -5.8 -4.66537 | opp_overlap 727014 727012 727011 AATTAGCCACAATGT TGCG GCTA CGCA TTTTGTCTTCCAGGA TERM 931 727186 - 727200 + g 72 -2.1 -4.90778 | gap 1, overlap 727185 727189 TAGTGGTCATGCGGG TC-GCG CCAG CGCCGA TTTTGTTTGCATCAC citE 728827 - 727919 - | citrate lyase beta chain (acyl lyase subunit) TERM 932 728659 - 728671 + g 78 -6.9 -4.63527 | opp_overlap 728658 728656 CGTGATATACCAGAC GGCGC GCC GCGTC TTTTTCGCGTAATGC citD 729120 - 728824 - | citrate lyase subunit gamma TERM 933 728984 - 728964 - G 73 -8.9 -3.91897 | CGTCGTAGCGAGAAA GCACCTCCA GGA TGGTGGCGC GAATGGCCTCGCCAA citC 730193 - 729117 - | citrate lyase synthetase (citrate (pro-3S)-lyase ligase SC0654 730386 - 730568 + | hypothetical protein dpiB 730578 - 732239 + | sensory histidine kinase in two-component regulatory system with DpiA, regulation of cit operon and plasmid inheritance genes TERM 934 732482 - 732429 - g 72 -11.8 -2.61216 | gap 2, opp_overlap 732406 732431, overlap 732426 GCATGAATTAATGCA GTCGCGCTATC-CTGGCGGC-GTCGT GTTT ACGACCGCCGCCAGTGACATGGAGAC GGTAGCGGAAGCGGT dpiA 732340 - 732888 + | two-component response regulator DpiA TERM 935 732932 - 732902 - T 85 -13.9 -3.02043 | AAGCCCGGGTTAAGA TGCCGGGGCGATG TTTTC CCTCGCCCCGGCT TACCGGCTATCAGCC dcuC 734327 - 732942 - | C4-dicarboxylate transporter DcuC TERM 936 733291 - 733271 - G 71 -10.5 -3.25111 | overlap 733269 733286 TTAAAATCACTAAGA CCAGCATCA GAA TAATGCTGG CGGAGCCAAAAGAAG TERM 937 733857 - 733835 - G 89 -13.4 -3.59262 | CCGGAGAGGCGCAAA TAGCCGCCGC CGC GCCGCGGCTA ATGCCGACGTTGACC TERM 938 734250 - 734240 - G 95 -8.2 -4.99043 | CGCCGACAAATAAAA CGCC AGT GGCG GAATATCCCTTAATG TERM 939 735420 - 735436 + H 71 -7.3 -4.02302 | overlap 735398 GTTGTACTGGTATCC GACACAG CAT TTGTGTC TATTTTTCATGTAAA cspE 735462 - 735671 + | cold shock protein CspE TERM 940 735716 - 735700 - T 90 -10.8 -4.20042 | opp_overlap 735700 AGCAAGATTTCAAAA CCCGCC CTTTC GGCGGG TTTTTTTTGCGCTTA TERM 941 735700 - 735716 + T 100 -10.8 -5.81032 | opp_overlap 735700 AGCAAGATTTCAAAA CCCGCC CTTTC GGCGGG TTTTTTTTGCGCTTA ccrB 736112 - 735729 - | camphor resistance protein CrcB TERM 942 736365 - 736391 + G 76 -10 -3.86194 | overlap 736386 CTTGACCTGCCGATT CGCGCCGCGCAG CCG CTGGATGGCGCG TTTATGACGCGGCTT ybeM 736203 - 736991 + | putative hydrolase TERM 943 737079 - 737098 + F 74 -5.6 -4.72272 | gap 1, overlap 737081 TATTCTCAGGTTAAT CCGGC-GCG TTA CGCAGCCTG TTTTTAGTGAAGAAG tatE 737120 - 737323 + | twin arginine translocase protein E TERM 944 737372 - 737358 - T 100 -11.4 -5.58454 | opp_overlap 737358 CGCAGAGTAAAAAAA CCGGCA AGT TGCCGG TTTTTTTTGCCTGAA TERM 945 737358 - 737372 + T 100 -11.4 -5.81412 | opp_overlap 737358 CGCAGAGTAAAAAAA CCGGCA AGT TGCCGG TTTTTTTTGCCTGAA lipA 738374 - 737409 - | lipoyl synthase ybeF 739533 - 738580 - | putative DNA-binding transcriptional regulator lipB 740410 - 739835 - | lipoyltransferase ybeD 740872 - 740576 - | hypothetical protein TERM 946 740897 - 740867 - G 100 -13.5 -5.82316 | gap 1, opp_overlap 740873, overlap 740873 ATTACGTAAAAAAAA TAACAACTCCCGCC ACAG GGCGGGAGTT-TTA CTGATGCATAGTATA TERM 947 740892 - 740873 - R 100 -15 -4.53495 | opp_overlap 740873, overlap 740867 TAAAAAAAATAACAA CTCCCGCC ACAG GGCGGGAG TTTTACTGATGCATA TERM 948 740873 - 740892 + r 100 -15 -4.3129 | opp_overlap 740873 740867 TAAAAAAAATAACAA CTCCCGCC ACAG GGCGGGAG TTTTACTGATGCATA dacA 742159 - 740948 - | D-alanyl-D-alanine carboxypeptidase fraction A TERM 949 741952 - 741968 + g 71 -4.4 -4.63218 | gap 1, overlap 741950 TCAGACTGGCCGGGT CG-CGAC GTTC GTCGGCG TTTTGTTCCGCCAGA TERM 950 742112 - 742094 - G 74 -8 -4.03234 | overlap 742095 742105 TGCGGTTGAGATAAA CGCGGCAC AAA GCGCCGTG GTGAGCGCCATGCGC SC0667 742179 - 742328 + | hypothetical protein rlpA 743444 - 742299 - | rare lipoprotein A TERM 951 742610 - 742667 + g 100 -17.5 -3.35813 | gap 1, opp_overlap 742640 TCGCAGTCGCTGGAG CCGTCGCTGGAGCCGCCACCGGCG-CGG AAA CCGGCGCTGGCTGTGGTGCCGGCGTCGG TTCATTACCCTCCAG TERM 952 742667 - 742640 - G 71 -9.7 -3.53444 | opp_overlap 742610 CCACCGGCGCGGAAA CCGGCGCTGGC TGTGGT GCCGGCGTCGG TTCATTACCCTCCAG mrdB 744567 - 743455 - | cell wall shape-determining protein mrdA 746471 - 744570 - | penicillin-binding protein 2 TERM 953 745135 - 745148 + g 74 -2.3 -5.03747 | opp_overlap 745146, overlap 745146 ACCGGAATCGTATCG CCCTG ATAC CACGG TTTTTTAAAGCGTTT TERM 954 745871 - 745886 + g 72 -2.5 -4.85653 | gap 1, overlap 745868 745872 CGATGTCATGGGTGG C-GGCG TAGTT CGCCAG TTTGTTTTCTCTGTC TERM 955 745898 - 745914 + g 70 -8.7 -3.63843 | overlap 745899 745904 CCAGTTTGTTTTCTC TGTCGAG ACG CTCGACG TCTTTATCATTGATT TERM 956 746095 - 746108 + g 74 -2.3 -5.00616 | opp_overlap 746089 GAGGTAAAGCGATGG GATCG GGCG CGCTC TTTTTTAAAGGCGGC TERM 957 746412 - 746400 - G 78 -6.2 -4.80396 | CAAAATACCCAAAAA GGCG ACCAG CGCC CGACGCACAAACAGT ybeA 746969 - 746502 - | SPOUT methyltransferase superfamily protein ybeB 747290 - 746973 - | hypothetical protein TERM 958 747223 - 747250 + g 75 -7 -4.42386 | overlap 747224 TGAACATCTAAGGCG ATGATGTCCTGA CCTT TCAGGTCATCAA TTTTGTCGATAACAA TERM 959 747224 - 747249 + g 71 -10.5 -3.2511 | overlap 747223 GAACATCTAAGGCGA TGATGTCCTGA CCTT TCAGGTCATCA ATTTTGTCGATAACA TERM 960 747383 - 747395 + r 72 -10.5 -2.8655 | TTAACGCTAACCTTC CGGCG GGA CGCCG TGTAGTATACCTGAA TERM 961 747436 - 747448 + r 79 -10.5 -3.53761 | TACCGGGACTTATGT CGCCG GAT CGGCG TTTAAAACCAGATTA cobC 748227 - 747619 - | alpha ribazole-5'-P phosphatase in cobalamin synthesis TERM 962 748283 - 748304 + H 70 -2.3 -5.00616 | CCCCTGATTGCGCAA CGTTTTTTT CACT AAAATAGCG TTTTTTGGCCGGAGG TERM 963 749153 - 749173 + G 73 -8.9 -3.89346 | overlap 749143 GGTTACGGGAGGAGG GCGCCCGGT TTT ATCAGGCGC TTTGTCAGCTCCCCC TERM 964 749253 - 749281 + G 84 -8.7 -4.28548 | GCGAGAGGATATTGA TCTGCAGCGACGG TTG CTGACGCAGCGGA TTTTAATCCGTAGCT cobD 748324 - 749418 + | threonine-phosphate decarboxylase nadD 750034 - 749393 - | nicotinic acid mononucleotide adenylyltransferase TERM 965 749736 - 749726 - G 81 -8.2 -4.30719 | opp_overlap 749729, overlap 749728 CTGGCCGATAATAAA CGCC AGC GGCG CTTCGGGCCCCTGTT holA 751067 - 750036 - | DNA polymerase III subunit delta TERM 966 750904 - 750878 - G 73 -5.9 -4.45083 | gap 1, overlap 750879 GGCAGAGTGAGAAAA GCGATCCCCAGT CGGT ACTGG-GATCGA GAGTAAAAGCGTGGT TERM 967 751042 - 751008 - G 76 -12.2 -3.00923 | gap 1, opp_overlap 751008 751009, overlap 751001 GCCCAATAGCAGATA TGCCGCACGCAGCCC TTCATT GAGCTGCGCGCGG-A GTTGTTCAGGATACA rlpB 751657 - 751067 - | LPS-assembly lipoprotein RplB TERM 968 751104 - 751144 + g 76 -10.2 -3.74872 | overlap 751103 ACGCGTGCTGGCGTA GAGGCGGGCGCCGCCGTC TCATT GTCGGCGGTAGCCTCCTC TTTCGTCGCCTGAAT TERM 969 751426 - 751458 + g 75 -11.3 -3.3353 | overlap 751422 751430 AAATAGTCACCGTTC CAAGCCGCAGAGACG GAA CGTCTTTGCGCGTTG TGTCTTTATCAAGCA TERM 970 751430 - 751455 + g 80 -10.5 -3.80279 | gap 1, overlap 751426 751422 AGTCACCGTTCCAAG C-CGCAGAGACG GAA CGTCTTTGCGCG TTGTGTCTTTATCAA TERM 971 751599 - 751566 - G 84 -13.9 -3.05463 | ATCGTTTTCATTGAA GCCGGAACCTGCGTA GTGC TACGCAGATGCCAGC CGCATCCGGCGGTGA leuS 754347 - 751672 - | leucyl-tRNA synthetase TERM 972 753340 - 753351 + g 81 -3.6 -5.28778 | AATCGCTTTATAGCC GGTG TCGA CGCC TTTTTTCTCCATGGT TERM 973 753404 - 753444 + g 73 -5.2 -4.56597 | opp_overlap 753415, overlap 753405 753415 TTGGTGTTACGGCAT TCGTCGATGAACGCCGCC AGCTC GGCGTTGTTCGCCGCCGC TTTTTGCGCCAGCGG TERM 974 753909 - 753925 + g 76 -5.1 -4.8048 | opp_overlap 753909, overlap 753901 753899 AGTCATAGCCAAAAC CCAGC GTTTTGA GCTGG TTTTTCATATACGCG uxaA 754542 - 754832 + | putative hydrolase N-terminus TERM 975 756026 - 756047 + F 75 -10.1 -3.54653 | opp_overlap 756026 756027, overlap 756027 CGTTCTGATACCAAA TCGGGCAGC ACAA GCTGTCCGG TTATCTCCTGGGAAT TERM 976 756027 - 756046 + F 73 -11.4 -2.72471 | opp_overlap 756026 756027, overlap 756026 GTTCTGATACCAAAT CGGGCAGC ACAA GCTGTCCG GTTATCTCCTGGGAA kdg 756068 - 757021 + | 2-keto-3-deoxygluconate permease TERM 977 757069 - 757041 - f 84 -8.2 -4.64861 | gap 1, opp_overlap 757047, overlap 757045 TCGGCGGAAAATAAA TCACGA-CGGGCG GTCT CGCCCGTTCATAA ACCAACAGGATGGTG TERM 978 757047 - 757062 + F 79 -11.8 -3.14132 | opp_overlap 757045 757041 GAAAATAAATCACGA CGGGCG GTCT CGCCCG TTCATAAACCAACAG yqiR 757089 - 759017 + | putative sigma-54 dependent transcriptional regulator ybeL 759110 - 759583 + | hypothetical protein TERM 979 759596 - 759619 + T 82 -13.2 -3.04263 | gap 1 TAAGGTTCATTATCG TGAGCGGACGG TTG CCGTCCGC-CA TGTTAAGCGTGCAGT ybeQ 760617 - 759622 - | TPR repeat-containing protein ybeR 760742 - 761449 + | putative cytoplasmic protein TERM 980 762818 - 762829 + G 76 -3 -5.09762 | overlap 762822 TTGGCCTCTGGCAGG TGAT TAAA ATCA TTTTATTTATTGGCG ybeS 761446 - 762879 + | DnaJ family molecular chaperone ybeU 762891 - 763586 + | putative cytoplasmic protein TERM 981 764450 - 764472 + T 80 -12.7 -3.10512 | overlap 764447 GACGACCTGTTGCTG GGCTGGTGC CGCCA GCACCGGCC TGATTTCTTCCCGCT TERM 982 765062 - 765076 + T 88 -12.8 -3.62275 | opp_overlap 765062 ACAGGGGCAGTGAAA GCGCCG TTA CGGCGC TTTCGGCTCGTCAAT TERM 983 765076 - 765062 - T 88 -12.8 -3.65529 | opp_overlap 765062 ACAGGGGCAGTGAAA GCGCCG TTA CGGCGC TTTCGGCTCGTCAAT SC0687 766747 - 765068 - | HSP70 family molecular chaperone TERM 984 765814 - 765794 - G 70 -8.9 -3.69283 | opp_overlap 765794 765805 CAATTTACCGAATAA GCGCACCGC GAT GCGTTGCAC CAGCGGCATCTGTGA TERM 985 766000 - 766024 + g 91 -12.2 -4.14392 | gap 1, opp_overlap 765991 GATAAAGCCAGCTCA TGCG-CAGCGG GGAG CCGCTGGCGCA TTTTGCGGCTTCAAC SC0688 768061 - 766823 - | putative cytoplasmic protein rihA 769028 - 768093 - | ribonucleoside hydrolase 1 TERM 986 768676 - 768697 + g 71 -4.3 -4.62336 | overlap 768677 GAGACGATGGTGACC GGTTGTGCG CTCT CGCGCAGCG TTTTTGCCATCAGCT TERM 987 769136 - 769115 - R 82 -13 -2.90714 | GTAAAGCGTGAGATA GCGCGCAC TCTGAC GTGCGCGC CGGGAAGATTAGTGC gltL 769870 - 769145 - | glutamate/aspartate ABC transporter ATP-binding protein gltK 770544 - 769870 - | glutamate/aspartate ABC transporter TERM 988 769945 - 769935 - G 72 -2.4 -4.92812 | TGATAACAAAATAAA CGGC GCC GGCG AACAGAATCATTTCG gltJ 771284 - 770544 - | glutamate/aspartate ABC transporter TERM 989 771319 - 771305 - R 100 -10 -5.76949 | TACTCCGAAAAAAAA GGTAGC AGC GCTACC CTCGAAGATTGTTGC gltI 772369 - 771443 - | glutamate and aspartate transporter subunit lnt 774295 - 772706 - | apolipoprotein N-acyltransferase TERM 990 772957 - 772928 - GR 71 -9.9 -3.14931 | GGTACTGCGCAGCAA CGGACGCGCCAGC TCCA GCGAACGCATCCG CGCCATCTGGAAATG ybeX 775142 - 774264 - | CBS domain-containing protein TERM 991 774491 - 774466 - GR 75 -9.9 -3.53343 | gap 1 AAGTGGGTGCCGAAA GCGTC-ATTGAA GTC TTCAATCGACGC CAGCGCGCGAATCGT TERM 992 775082 - 775095 + gr 75 -3.8 -4.946 | GCTGGCTGAGTAGCA GGGA AAAAAA TCCC TTTTTACTGTTTACT ybeY 775773 - 775300 - | putative metalloprotease phoL 776855 - 775770 - | putative phosphate starvation-inducible protein, ATP-binding TERM 993 776969 - 776937 - R 72 -4.8 -4.6955 | gap 1, overlap 776938 776939 GATGAAGAGAGAAAA TTG-CAAGGCCCGTC GGGC GACAGGCCATGACTA GGAAGCCCGACAGGC TERM 994 776974 - 776999 + r 74 -11.1 -2.88404 | gap 1, opp_overlap 776974, overlap 776973 776997 GGCCATGACTAGGAA GCCCGACAGGCG TAG CGCCA-TCGGGC ATTATTGCCTTTTCA TERM 995 776999 - 776974 - R 83 -13.3 -3.23216 | gap 1, opp_overlap 776974 776973 776997 GGCCATGACTAGGAA GCCCGACAGGCG TAG CGCC-ATCGGGC ATTATTGCCTTTTCA miaB 778487 - 777021 - | methylthiolation of isopentenylated A37 derivatives in rRNA TERM 996 778954 - 778921 - g 85 -12.5 -3.51365 | gap 1, overlap 778924 CTATATGGTAGAGAA CAACGTCCTGCAACAG GCG CTGTGGCAGG-CGCTG GAAACGCACCCCGGC TERM 997 778951 - 778924 - g 80 -10.6 -3.88946 | gap 1, overlap 778921 TATGGTAGAGAACAA CGTCCTGCAACAG GCG CTGTGGCAGG-CG CTGGAAACGCACCCC TERM 998 779218 - 779230 + G 71 -4.7 -4.62302 | overlap 779226 GCAGTTTACGCCAAC GGGGC CGC GCGCC TTTTTGCCGCTGTTC ubiF 778589 - 779764 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 999 779890 - 779863 - T 86 -13.6 -3.2362 | opp_overlap 779869, overlap 779869 GAATTGCCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTA AAGGTGGCTGGGGTA TERM 1000 779884 - 779869 - T 100 -10.4 -5.1417 | opp_overlap 779869, overlap 779863 CCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTAAAGGTGGCT TERM 1001 779869 - 779884 + T 93 -10.4 -4.60041 | opp_overlap 779869 779863 CCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTAAAGGTGGCT TERM 1002 780808 - 780793 - T 91 -6.1 -5.60993 | opp_overlap 780793 TTTGCTATAAAAAAA GAGCC ACTAAG GGCTC TTTCGTCATCGTTAA asnB 782489 - 780825 - | asparagine synthetase B TERM 1003 781722 - 781742 + g 91 -6.8 -5.2189 | GGAGCGCTCCTGATC TTCGACGC GACGG GCGGCGAA TTTTTTGGTGATTGC TERM 1004 781845 - 781860 + g 80 -5.4 -4.87665 | gap 1, overlap 781841 781844 CACGGATTCTTCCAG CGC-CTG GCG CAGCGCG TTTTTGTCGGTAACG nagD 783531 - 782779 - | UMP phosphatase TERM 1005 783031 - 783019 - G 73 -6.2 -4.52589 | opp_overlap 783023 TTTGCCGACATAAAA CGGC TTCCG GCCG GAAATTTTTTCAATG TERM 1006 783406 - 783429 + g 87 -8 -4.58395 | TTGCGACGGGTAATT GGTCAGCAGC ACCA GCGGCAGACC TTTTTCCAGAATCCC nagC 784798 - 783578 - | N-acetylglucosamine operon transcriptional repressor nagA 785957 - 784803 - | N-acetylglucosamine-6-phosphate deacetylase TERM 1007 785162 - 785174 + g 70 -9.1 -3.66356 | CCAGACAAAGTTTGT CGCCT TTA AGGCG TTTGGCATTGCGAAT TERM 1008 785604 - 785633 + g 73 -9.4 -3.80114 | gap 1, overlap 785606 GTGCGGATGTTTTTC CA-GGTATTCGCG CATGA CGCGAATGCCCTG TTTCATCAATTCATC TERM 1009 785606 - 785630 + g 72 -12.2 -2.68381 | overlap 785604 GCGGATGTTTTTCCA GGTATTCGCG CATGA CGCGAATGCC CTGTTTCATCAATTC TERM 1010 786011 - 785979 - R 82 -7 -4.8048 | gap 1, overlap 785980 785983 CCCCGATATCAAAAA TTTACCGCCCCGC ATTGACTG GCGGGGCGG-AGA CAACATTACAGACCT TERM 1011 786008 - 785983 - R 87 -14.7 -2.87672 | overlap 785979 785980 GATATCAAAAATTTA CCGCCCCGC ATTGACTG GCGGGGCGG AGACAACATTACAGA nagB 786817 - 786017 - | glucosamine-6-phosphate deaminase TERM 1012 786049 - 786066 + g 74 -7.1 -4.37198 | opp_overlap 786051 TTTCTGCTTCTAATT CATTGAA ATAT TTCAATG TTTTAACTTTAAGTT TERM 1013 786998 - 787018 + H 73 -7.7 -4.08394 | ACAAAAAACACCCAT TTAATTTGC GAG GCGAATTAA TTTTCCACACACTCT TERM 1014 787117 - 787101 - H 100 -8.7 -5.58179 | overlap 787102 787114 CAGCACAATAAAAAA CGGCTTC AAA GAAGCCA TATCGGCGTCTCGTA TERM 1015 787116 - 787102 - H 80 -10 -3.9328 | overlap 787101 787114 AGCACAATAAAAAAC GGCTTC AAA GAAGCC ATATCGGCGTCTCGT nagE 787144 - 789096 + | N-acetyl glucosamine specific PTS system components IIABC TERM 1016 789183 - 789150 - f 74 -5.9 -4.5954 | opp_overlap 789155, overlap 789155 CGATATCACAGAAAA CATAAGCGGCAGAGG GAAA CCTTCGCCGCTTTTT TTTACCGCAATTAGC TERM 1017 789178 - 789155 - f 87 -10.2 -4.05861 | opp_overlap 789155, overlap 789150 TCACAGAAAACATAA GCGGCAGAGG GAAA CCTTCGCCGC TTTTTTTTACCGCAA TERM 1018 789155 - 789178 + F 100 -11 -5.75342 | gap 1, opp_overlap 789155 789150 TCACAGAAAACATAA GCGGCAGAGGG AAA CCTTC-GCCGC TTTTTTTTACCGCAA TERM 1019 790333 - 790323 - g 83 -8.2 -4.42639 | overlap 790324 790325 AGATCTGAACGAAAA CGCG CCG CGCG CAATGGCGGTAATCG glnS 789307 - 790974 + | glutaminyl-tRNA synthetase TERM 1020 791033 - 791017 - f 74 -10.8 -3.19851 | opp_overlap 791017 AAAATACCTTATCAA CGCCGC GTTCT GCGGCG TTTTTTCTCTGCATT TERM 1021 791017 - 791033 + F 100 -11.5 -5.38951 | opp_overlap 791017 AAAATACCTTATCAA CGCCGCG TTC TGCGGCG TTTTTTCTCTGCATT TERM 1022 791506 - 791527 + G 75 -5.7 -4.57569 | overlap 791507 GGGGTGGATCGTTGT TCCGCAGGC GCAA GCCTCCGGC TTTTTCGACGACTCC ybfM 791426 - 792832 + | putative outer membrane protein TERM 1023 792839 - 792865 + F 80 -12.2 -3.01712 | ATTTTCTGATGTCAG ATGCGGCAGGCT GCC GGCCTGCCGCGC TGTTGAGGAACGACC ybfN 792882 - 793214 + | putative lipoprotein TERM 1024 793231 - 793257 + T 100 -13.7 -5.07107 | AACCTGCCTTGCCAC CCACGGGCGAA TGTTT TCCGCCCGTGG TTTTTTCAGGCTTTA citA 794567 - 793263 - | citrate-proton symporter TERM 1025 793837 - 793809 - G 90 -5.3 -5.18371 | gap 1 GGTGATAAAATAAAA CGTTG-TGGTGG TCATCG CCACCAGCAGCG TTCCGGCCGTAATAA TERM 1026 794233 - 794196 - G 89 -13.4 -3.6279 | opp_overlap 794196, overlap 794197 AAATCCTTGTAATAA CCGGCCCAACAGCACC AACGCA GGCGCTGCCAGGCCGA TCGTTTGGTAGCCGG TERM 1027 794232 - 794197 - G 83 -14.7 -2.77192 | opp_overlap 794196, overlap 794196 AATCCTTGTAATAAC CGGCCCAACAGCACC AACGCA GGCGCTGCCAGGCCG ATCGTTTGGTAGCCG TERM 1028 795003 - 794981 - R 78 -4.7 -5.0538 | overlap 794983 CGGCAGGCTAAAAAA CGGGTAGGG CGCTT CCCAACCGG CGACGTAGTGATAGC frdA 797147 - 795744 - | tricarballylate dehydrogenase TERM 1029 795775 - 795788 + g 74 -9.5 -3.65991 | TGCGCCTCCTTGTGC GCCGC GCGG GCGGC TTCTATTCCCGCAAT TERM 1030 796409 - 796393 - G 71 -10.1 -3.57674 | overlap 796391 ACGCGAGTACAAATA CCGCCGT CGT ACAGCGG CGCCCTGGCATCAAT TERM 1031 796520 - 796510 - G 77 -8.2 -4.07687 | ACGCCCTGGTTAAAA CGCG TGC CGCG AATCAGGAAATTATC TERM 1032 796547 - 796557 + g 81 -8.2 -4.36914 | opp_overlap 796534, overlap 796534 796533 TATCCGCGGGCCATT CGCC GCG GGCG TTTTCTCCCCAGGCC TERM 1033 796796 - 796785 - G 90 -5.8 -5.24129 | overlap 796789 GCCGCCCATAAAAAA CGCA TTGG TGCG CGCAACGTGGAGCGC nacR 798171 - 797245 - | LysR family transcriptional regulator TERM 1034 797704 - 797723 + g 82 -5.6 -4.98672 | TTCTTCAAGGATCGG TCTGGCGC TCCA GCGCAGGA TTTTATCTTTTTGAA TERM 1035 798250 - 798267 + r 75 -11.3 -3.03635 | opp_overlap 798250 GGAGGATATAAAAAA GCCAACC GGGC GGTTGGC TCTTCGAAAGATTTA TERM 1036 798267 - 798250 - R 100 -11.3 -5.39721 | opp_overlap 798250 GGAGGATATAAAAAA GCCAACC GGGC GGTTGGC TCTTCGAAAGATTTA fur 798738 - 798286 - | ferric uptake regulator fldA 799550 - 799020 - | flavodoxin FldA ybfE 799994 - 799701 - | LexA regulated protein TERM 1037 800116 - 800078 - R 80 -13.1 -2.57244 | gap 1, opp_overlap 800080 800080 800081 800083, overlap 800074 TCAGCGAGGAAGCGA CGCCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA-G TTTTTAATCAGTTAG TERM 1038 800080 - 800115 + r 77 -10.2 -3.45571 | opp_overlap 800078 800074, overlap 800080 800081 800083 AGCGAGGAAGCGACG CCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA GTTTTTAATCAGTTA TERM 1039 800080 - 800116 + r 100 -10 -4.77157 | gap 1, opp_overlap 800078 800074, overlap 800080 800081 800083 AGCGAGGAAGCGACG C-CAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGAG TTTTTAATCAGTTAG TERM 1040 800081 - 800114 + r 83 -13.7 -2.6662 | opp_overlap 800078 800074, overlap 800080 800080 800083 GCGAGGAAGCGACGC CAACGCCCGCGCGCG TAAT CGCGCACAGGCGATG AGTTTTTAATCAGTT TERM 1041 800083 - 800112 + r 72 -10.5 -2.86601 | opp_overlap 800078 800074, overlap 800081 800080 800080 GAGGAAGCGACGCCA ACGCCCGCGCGCG TAAT CGCGCACAGGCGA TGAGTTTTTAATCAG ybfF 800898 - 800128 - | hypothetical protein TERM 1042 801349 - 801338 - g 100 -7.2 -5.31275 | opp_overlap 801329 801338 GCCGAGCAGAAAAAA GCGG TCAA CCGC TTTATGCTGATTCTG TERM 1043 801338 - 801349 + G 71 -7.2 -4.03093 | opp_overlap 801338, overlap 801329 GCCGAGCAGAAAAAA GCGG TCAA CCGC TTTATGCTGATTCTG seqA 801083 - 801625 + | replication initiation regulator SeqA TERM 1044 802059 - 802049 - g 85 -2.4 -5.55769 | opp_overlap 802050, overlap 802051 GTCCATAACAAAAAA GGCG GCC CGCT GGCTGATGGTATTGT pgm 801650 - 803290 + | phosphoglucomutase TERM 1045 803296 - 803284 - T 78 -6.2 -4.7078 | CGAAGTATTGAAAAA CGCC TGATG GGCG ATATGGAAGAAAAAG TERM 1046 803332 - 803305 - T 77 -11.4 -3.1247 | opp_overlap 803311, overlap 803311 ATGGGCGATATGGAA GAAAAAGGAGCC TTAC GGCTCCTTTTTT GTATTAACGGCGCTG TERM 1047 803311 - 803326 + T 100 -10.4 -5.47159 | opp_overlap 803305 803311 GATATGGAAGAAAAA GGAGCC TTAC GGCTCC TTTTTTGTATTAACG TERM 1048 803326 - 803311 - T 100 -10.4 -5.12068 | opp_overlap 803311, overlap 803305 GATATGGAAGAAAAA GGAGCC TTAC GGCTCC TTTTTTGTATTAACG SC0719 803890 - 803405 - | putative cytoplasmic protein TERM 1049 803949 - 803919 - R 89 -11 -4.17089 | opp_overlap 803948, overlap 803920 TTCAAAGTGTGAAAA TGCCCGGACTACCG TTA CCGCAGCCCGGGCG CGCCATCAGCCGTGT TERM 1050 803948 - 803920 - R 88 -14.5 -3.09772 | overlap 803919 TCAAAGTGTGAAAAT GCCCGGACTACCG TTA CCGCAGCCCGGGC GCGCCATCAGCCGTG TERM 1051 803948 - 803963 + r 70 -2.4 -4.91473 | opp_overlap 803919 TTACCGCAGCCCGGG CGCGCC ATCA GCCGTG TTTATTTTTCAATTC potE 805274 - 803955 - | putrescine transporter TERM 1052 804112 - 804122 + g 74 -6.8 -4.25104 | opp_overlap 804112 AAGGCCACGAAGTTA GCGA CTT TCGC TTTTGATGACGGCAC speF 807469 - 805271 - | ornithine decarboxylase TERM 1053 806351 - 806362 + g 84 -3 -5.29782 | GCGCGATTGCCCTTT GATA TGGC TATC TTTTTTATGGATCTG kdpE 808908 - 808231 - | DNA-binding transcriptional activator KdpE kdpD 811589 - 808905 - | sensor protein KdpD TERM 1054 809071 - 809039 - G 76 -10.4 -3.63068 | opp_overlap 809038, overlap 809032 809029 809040 CGATAGCATGGCAAA TCGCCAGCCCCAGC CCCAC GCCGGGGACGGCGG ACTCTTTGTTGCCGC TERM 1055 809070 - 809040 - G 79 -13.9 -2.7752 | opp_overlap 809038, overlap 809032 809029 809039 GATAGCATGGCAAAT CGCCAGCCCCAGC CCCAC GCCGGGGACGGCG GACTCTTTGTTGCCG TERM 1056 810554 - 810526 - G 95 -14.5 -3.53563 | opp_overlap 810527 AGACGGTCGGCGAAA GCGTCACGTCGCC ACC AGCGTCGCGACGC CGGGCGGCCCATGAC TERM 1057 810871 - 810889 + g 72 -11.7 -2.82516 | TTTTCTTCGCCCGGA TGCGCGC GCCAG GCGCGCA TCTGATCGTCCACGC kdpC 812170 - 811586 - | potassium-transporting ATPase subunit C kdpB 814227 - 812179 - | potassium-transporting ATPase subunit B kdpA 815927 - 814248 - | potassium-transporting ATPase subunit A TERM 1058 814941 - 814954 + g 83 -8.1 -4.44046 | opp_overlap 814928 CAGGCTGCTGGCCAG CACGC CAAA GCGTG TTTCTTTACCCTCCA SC0727 816016 - 815927 - | putative outer membrane protein TERM 1059 816002 - 815978 - G 70 -9.3 -3.72395 | opp_overlap 815983, overlap 815983 ATAACCTAAAAGTAA GAAAACCAGCA CGA TGCCGGTTATC ACGCCTGCACTCACA TERM 1060 815997 - 815983 - G 91 -7.8 -4.89562 | opp_overlap 815983, overlap 815978 CTAAAAGTAAGAAAA CCAGCA CGA TGCCGG TTATCACGCCTGCAC TERM 1061 816130 - 816119 - H 73 -2.2 -5.14894 | AAAAAAGTATAAAAA TGGC AAAG ACCA TTATTTAACTAATGA TERM 1062 816598 - 816577 - H 80 -7.2 -4.60487 | opp_overlap 816584 GACCAGCCTGAAAAA CCGTCAGC CGCCAC GCTGGCGG TTTTTTTATGCGCCA TERM 1063 816584 - 816598 + H 100 -11.4 -5.60993 | opp_overlap 816577 CTGAAAAACCGTCAG CCGCCA CGC TGGCGG TTTTTTTATGCGCCA TERM 1064 817300 - 817288 - g 75 -6.2 -4.63218 | CCCGGTGGAAGAAAA CGCG GTCAT CGCG CAGCTACGTCAGTTT phrB 816668 - 818008 + | deoxyribodipyrimidine photolyase TERM 1065 818120 - 818095 - T 74 -11.1 -2.87463 | opp_overlap 818095 818096, overlap 818083 818082 AAGGGGCGTGATACA GGCCCGGTAGC GCAA ACTACCGGGCA TTCTGCTATCAGGAT TERM 1066 818095 - 818120 + T 77 -10.4 -3.4678 | opp_overlap 818083 818082 818095, overlap 818096 AAGGGGCGTGATACA GGCCCGGTAG CGCAAA CTACCGGGCA TTCTGCTATCAGGAT TERM 1067 818096 - 818119 + T 83 -13.9 -2.67747 | opp_overlap 818083 818082 818095, overlap 818095 AGGGGCGTGATACAG GCCCGGTAG CGCAAA CTACCGGGC ATTCTGCTATCAGGA ybgH 819844 - 818129 - | POT family transport protein TERM 1068 819647 - 819665 + g 75 -6 -4.56969 | opp_overlap 819646, overlap 819633 CTGCGGCAAGAAAGC GGCATTCT CAG ATAATGCC TTTCTTTGTGGGCTT ybgI 819939 - 820682 + | putative hydrolase-oxidase ybgJ 820698 - 821354 + | hypothetical protein ybgK 821348 - 822280 + | hypothetical protein ybgL 822225 - 823004 + | hypothetical protein nei 823126 - 823917 + | endonuclease VIII abrB 825018 - 823972 - | hypothetical protein TERM 1069 824026 - 824009 - G 89 -9.1 -4.53303 | overlap 824010 TAGGTTGATATAAAA CGGGCCA CTGC TGGCCCA GTTAACAGAATGCTG TERM 1070 824025 - 824010 - G 73 -10.4 -3.315 | overlap 824009 AGGTTGATATAAAAC GGGCCA CTGC TGGCCC AGTTAACAGAATGCT TERM 1071 825151 - 825114 - R 72 -5.5 -4.55016 | opp_overlap 825118, overlap 825115 825118 AGAAAAAAGGGAAAA TGTACCGGATGGCGA GGGTTGTG TCGCCATCCGGTTGT CAATTAACGCTTCAG TERM 1072 825150 - 825115 - R 70 -9 -3.30569 | opp_overlap 825118, overlap 825114 825118 GAAAAAAGGGAAAAT GTACCGGATGGCGA GGGTTGTG TCGCCATCCGGTTG TCAATTAACGCTTCA TERM 1073 825118 - 825147 + r 100 -15.1 -3.42056 | opp_overlap 825115 825114 825118 AAAAGGGAAAATGTA CCGGATGGCGA GGGTTGTG TCGCCATCCGG TTGTCAATTAACGCT TERM 1074 825147 - 825118 - R 93 -15.1 -2.79535 | opp_overlap 825118, overlap 825115 825114 AAAAGGGAAAATGTA CCGGATGGCGA GGGTTGTG TCGCCATCCGG TTGTCAATTAACGCT gltA 826438 - 825155 - | type II citrate synthase TERM 1075 826401 - 826416 + g 77 -4.7 -4.85433 | AGTTCAATAGCAGTG TCACC AGTAAG GGTGA TTTTTGCCTTTGTAT TERM 1076 826792 - 826802 + H 80 -5.4 -4.95758 | CCCCATAACTTTTAC GCAT TAT ATGC TTTTTCTGGTGTCGT sdhC 827192 - 827581 + | succinate dehydrogenase cytochrome b556 large membrane subunit TERM 1077 828539 - 828504 - g 74 -10.4 -3.59979 | gap 1, opp_overlap 828530 GTGGTGTACTTCAAA GCCCGCG-CGACGGT GCTGGCG ACCGGCGGCGCAGGC CGTATCTACCAGTCC TERM 1078 828599 - 828563 - g 71 -10.2 -3.21747 | gap 1, overlap 828575 CCAGTCCACCACCAA CGCTCACATCAACACCG GTGA CGGTGTCGGTATG-GCG CTGCGTGCCGGTGTC TERM 1079 828652 - 828706 + G 81 -12.7 -3.09516 | gap 1, opp_overlap 828688 GGCAGTTCCACCCGA CCGGCATCGCCGGGGCGGGCGTGCTG GTGA CAGAAGG-CTGCCGCGGCGAAGGCGG TTACCTGCTGAACAA sdhA 827922 - 829688 + | succinate dehydrogenase flavoprotein subunit sdhB 829702 - 830421 + | succinate dehydrogenase iron-sulfur subunit TERM 1080 830748 - 830770 + F 74 -10.6 -3.25823 | opp_overlap 830738, overlap 830749 830751 AACAAGTGAACCCCG GCACGCATAC AGC GTATGCGTGG TTAGTATCCACGGCG TERM 1081 830749 - 830769 + F 83 -14.1 -2.55351 | opp_overlap 830738, overlap 830748 830751 ACAAGTGAACCCCGG CACGCATAC AGC GTATGCGTG GTTAGTATCCACGGC TERM 1082 830751 - 830767 + F 74 -10.9 -2.81547 | opp_overlap 830738, overlap 830749 830748 AAGTGAACCCCGGCA CGCATAC AGC GTATGCG TGGTTAGTATCCACG TERM 1083 832393 - 832383 - g 79 -3.2 -5.1417 | CCAGAAAATCAAAAA GCAT CCG ACGC CGCGTAAAATCTACG kgd 830947 - 833748 + | alpha-ketoglutarate decarboxylase sucB 833763 - 834971 + | dihydrolipoamide acetyltransferase TERM 1084 835539 - 835518 - g 78 -5.7 -4.72846 | opp_overlap 835520, overlap 835520 GTAGAGATCGAAAAA GTCGCGGAG GAAA CCCCGCATC TGATCCATAAAGTCG TERM 1085 836184 - 836171 - g 74 -9.5 -3.73068 | TCTGGAAGGCAACAA CGCCG AACT CGGCG CGAAGAAACTGGCTG sucC 835113 - 836279 + | succinyl-CoA synthetase subunit beta sucD 836279 - 837148 + | succinyl-CoA synthetase subunit alpha TERM 1086 837167 - 837151 - f 77 -3.5 -5.22137 | overlap 837152 837153 AATTATAAAATAAAA CTCGCTG TTC CTGCGGG AACAGATAAATGTCC TERM 1087 837198 - 837216 + F 100 -11.7 -5.33866 | overlap 837214 GTTTTCGACATGGTT GGCCACC TTTAC GGTGGCC TTTTTTATGGCTTTA TERM 1088 837320 - 837308 - f 70 -4.9 -4.39287 | TGAACTATAGGAAAA TAATG CCT CATTA AAAAAACATGGTGGA TERM 1089 839002 - 839029 + G 73 -9.2 -3.77607 | gap 1, overlap 839003 839018 ACTATGTTGGGGACA TCTTCGGTGCGCC GCT GGC-CATCGAAGG TTTGATGGCCTTCTT TERM 1090 839018 - 839039 + G 76 -10.9 -3.7282 | overlap 839003 839002 CTTCGGTGCGCCGCT GGCCATCGA AGGT TTGATGGCC TTCTTCCTCGAATCC cydA 838731 - 840299 + | cytochrome d terminal oxidase, polypeptide subunit I cydB 840315 - 841454 + | cytochrome d terminal oxidase polypeptide subunit II ybgT 841469 - 841582 + | hypothetical protein TERM 1091 841617 - 841644 + G 78 -12.1 -3.21416 | gap 1, opp_overlap 841623, overlap 841623 ACTGTATGCGGTAAT GGACAAGCGCCC GTTAA GGGCGCTT-TCC TTCGTGATGGCGATA TERM 1092 841623 - 841639 + G 83 -10.8 -3.97042 | opp_overlap 841623, overlap 841617 TGCGGTAATGGACAA GCGCCC GTTAA GGGCGC TTTCCTTCGTGATGG TERM 1093 841639 - 841623 - g 73 -10.8 -3.41878 | opp_overlap 841617 841623 TGCGGTAATGGACAA GCGCCC GTTAA GGGCGC TTTCCTTCGTGATGG ybgE 841582 - 841875 + | hypothetical protein TERM 1094 841921 - 841896 - f 89 -9.1 -4.58685 | opp_overlap 841896 AAACCTCCTTAAAAA TATAGGGGCTT GCAT AAGCCCATATA TTTTTACTCTCCCTT TERM 1095 841896 - 841921 + F 93 -9.1 -4.82154 | opp_overlap 841896 AAACCTCCTTAAAAA TATAGGGGCTT GCAT AAGCCCATATA TTTTTACTCTCCCTT ybgC 842104 - 842508 + | acyl-CoA thioester hydrolase YbgC tolQ 842505 - 843197 + | colicin uptake protein TolQ tolR 843201 - 843629 + | colicin uptake protein TolR TERM 1096 843955 - 843942 - g 87 -8.1 -4.67556 | AGAAGAGCGTAAAAA GCTGC AACA GCAGC AAGCAGAGGAGCTGC TERM 1097 844142 - 844132 - g 85 -2.4 -5.46657 | GACGCGAAGAAAAAA GCGG AGG CCGA GGCGGCGAAAGCGGC TERM 1098 844412 - 844402 - g 83 -8.2 -4.45738 | GAGGCGAAGAAGAAA GCGG ATG CCGC GGCGGCGAAAGCAGC TERM 1099 844460 - 844423 - g 71 -9.7 -3.53012 | overlap 844426 844447 844448 844449 GCCGCGGCGGCGAAA GCAGCGGCGGACGCT AAGAAAAA AGCGGCCGCCGCAGA AGGCGTCGACGATCT TERM 1100 844457 - 844426 - g 86 -14.4 -2.90496 | overlap 844423 844447 844448 844449 GCGGCGGCGAAAGCA GCGGCGGACGCT AAGAAAAA AGCGGCCGCCGC AGAAGGCGTCGACGA TERM 1101 844457 - 844447 - g 100 -8.2 -5.46657 | overlap 844426 844423 844448 844449 GACGCTAAGAAAAAA GCGG CCG CCGC AGAAGGCGTCGACGA tolA 843694 - 844854 + | cell envelope integrity inner membrane protein TolA tolB 844978 - 846270 + | translocation protein TolB pal 846305 - 846829 + | peptidoglycan-associated outer membrane lipoprotein TERM 1102 846893 - 846909 + G 100 -15.1 -4.25104 | TTACTGGTTGGCATA GCGGCCC CTT GGGCCGC TTTTGCTCAGGCGCC TERM 1103 847165 - 847147 - g 83 -10.2 -3.9392 | GGGGAGCTTAAATAA TGGCGGCG CAG CGCAGCCA GCAGCTGGTGACCAG ybgF 846839 - 847627 + | hypothetical protein TERM 1104 847629 - 847676 + F 90 -14.3 -3.15579 | opp_overlap 847628 TTAACGCGATGTAAT GCGTACCATGCGACCAGAAAA CGCCTT TTTTCTGGTCGCGTCGTGCGA TTCCTAAGCAGTTGA TERM 1105 847921 - 847906 - f 72 -9 -3.52941 | overlap 847903 847920 AAACGTGAAGGATAA CGTTGC GTCA GCAACG GCCCGTAGGGCGAGG TERM 1106 848428 - 848413 - f 72 -9 -3.52539 | overlap 848427 GAACGTGAAGGATAA CGTTGC TTTA GCAACG GCCCGAAGGGCGAGG TERM 1107 848617 - 848585 - f 71 -9.9 -3.19463 | opp_overlap 848586 848594, overlap 848586 848594 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATATGGAA TERM 1108 848586 - 848616 + F 87 -14.9 -2.90763 | opp_overlap 848585 848586 848594, overlap 848594 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATATGGA TERM 1109 848616 - 848586 - f 80 -13.4 -2.51464 | opp_overlap 848586 848594, overlap 848585 848594 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATATGGA TERM 1110 848594 - 848608 + F 100 -8.5 -5.24989 | opp_overlap 848594 848586 848585, overlap 848586 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 1111 848608 - 848594 - f 100 -9.2 -5.17576 | opp_overlap 848586 848594, overlap 848586 848585 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 1112 848633 - 848659 + F 73 -10.2 -3.09834 | opp_overlap 848633, overlap 848635 ATCTGCGATATGGAA GATTCGAACCTG CCG TAGGTTCGGGTC TTGCCTGATGCGCTG TERM 1113 849888 - 849841 - g 70 -9.9 -3.44848 | opp_overlap 849857 849885, overlap 849839 849843 GCGGCGCATGAAATA CAGGTTGATGCGGC-GCTACGCG AGGG CGCATTACTGCCGC-TCAACCGG ATGCTGGATTTTGCG TERM 1114 849886 - 849843 - g 74 -11.1 -3.29704 | opp_overlap 849857 849885, overlap 849841 849839 GGCGCATGAAATACA GGTTGATGCGGC-GCTACGCG AGGG CGCATTACTGCCGC-TCAACC GGATGCTGGATTTTG nadA 848878 - 849921 + | quinolinate synthetase TERM 1115 850656 - 850626 - g 82 -11 -3.85698 | opp_overlap 850628 850631, overlap 850628 TCGCCTGTGGATAAA CAGCGCGCGGGAGC GAG GATCGCGCGCGCTT TCCCGTTAATGGTGA TERM 1116 850628 - 850654 + G 89 -13.6 -3.68244 | opp_overlap 850628 850626, overlap 850631 GCCTGTGGATAAACA GCGCGCGGGAGC GAG GATCGCGCGCGC TTTCCCGTTAATGGT TERM 1117 850654 - 850628 - g 89 -13.6 -3.51934 | opp_overlap 850628 850631, overlap 850626 GCCTGTGGATAAACA GCGCGCGGGAGC GAG GATCGCGCGCGC TTTCCCGTTAATGGT pnuC 849946 - 850665 + | NMN family, nucleoside/purine/pyrimidine transporter ybgR 851600 - 850662 - | zinc transporter ZitB TERM 1118 851688 - 851671 - R 100 -11.3 -5.54907 | opp_overlap 851670 851669 CTGACAAAATAAAAA GGAGAGC GAAA GCTCTCC CGTTATCAGACTTTT ybgS 852097 - 851711 - | putative homeobox protein TERM 1119 852278 - 852292 + H 79 -2.1 -5.54894 | gap 1 TTAGATCCCATTTTT CGCTAC ATTT GT-GCG TTTTTTTCCTGAATT aroG 852417 - 853469 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1120 853544 - 853509 - T 100 -15.6 -4.57353 | opp_overlap 853513 853541, overlap 853511 GTGCAGGATAGAAAA CATATCGGTCCGGTAA CAGC CTACCGGACCGATATT GCCAATATTAATGTA TERM 1121 853542 - 853511 - T 100 -18.2 -3.89814 | opp_overlap 853513 853541, overlap 853509 GCAGGATAGAAAACA TATCGGTCCGGTAA CAGC CTACCGGACCGATA TTGCCAATATTAATG TERM 1122 853513 - 853540 + T 93 -15.7 -3.06315 | opp_overlap 853511 853509 AGGATAGAAAACATA TCGGTCCGGTA ACAGCC TACCGGACCGA TATTGCCAATATTAA fumB 854108 - 853563 - | fumarate hydratase class I anaerobic fumA 854968 - 854123 - | fumarate hydratase TERM 1123 855160 - 855171 + G 74 -2.2 -4.99043 | overlap 855158 TAACTTAACCAGAGT TGCT GAGC GGCA TTTTGTTTCTCAACC ymbI 855098 - 855988 + | LysR family transcriptional regulator TERM 1124 858419 - 858446 + G 73 -5.7 -4.49939 | TAGTTGGGTTTGTTT TATCGTTAGTA TGATTT TACTACCGATA TTTTATCCCTTCTAT yfbS 857196 - 858464 + | putative cation transporter oadG 858514 - 858753 + | oxaloacetate decarboxylase subunit gamma TERM 1125 859237 - 859205 - g 81 -14.1 -2.62184 | opp_overlap 859205 859204 CCCTCTCCTACACCA CCAGCCCGGCCCACA CCC TGCAGACCTGGCTGG ATTTAACGGAGCAAC oadA 858769 - 860544 + | pyruvate carboxylase subunit B TERM 1126 861723 - 861671 - g 75 -3.9 -4.92757 | gap 1, overlap 861675 861676 GCAGTAAGAACAAAA TCAACCCGCTGATTGGCTCCGCCG GCGTGT CGGCGGTGCCGATG-GCGGCCCGC GTATCGAACAAAGTG TERM 1127 861718 - 861676 - g 71 -11.2 -2.91144 | gap 1, overlap 861675 861671 AAGAACAAAATCAAC CCGCTGATTGGCTCCGCCG GCGTGT CGGCGGTGCCGATG-GCGG CCCGCGTATCGAACA oadB 860557 - 861858 + | putative oxalacetate decarboxylase, subunit beta TERM 1128 862387 - 862406 + G 81 -12.8 -3.03124 | opp_overlap 862385, overlap 862376 CGTGCGCAGCATATC GCTGCCGG TTTA CCGGCGGC TGTTGCGGGATCAAC SC0767 862028 - 862675 + | putative cytoplasmic protein TERM 1129 862838 - 862855 + F 95 -11.3 -4.65722 | TGTCAGCAGCCTCAA GCGTGGA TGGC TCCACGC TTTCTTTGTCTATGG SC0768 863055 - 864134 + | putative ABC transport protein fhuC 864134 - 864910 + | putative ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component TERM 1130 864930 - 864975 + T 86 -14.2 -3.29511 | gap 1 TATTGCCTGATGGCG CTGCGCTTATCCGGCCTAC CCATTGCTC GTAGGCCGGATACG-GCAG TTATACCGCCATCCG gpmA 865753 - 865001 - | phosphoglyceromutase galM 867017 - 865977 - | aldose 1-epimerase TERM 1131 866349 - 866378 + g 70 -6.5 -4.09685 | gap 1, opp_overlap 866364 AATGACTTTTGGCAT TCGGAAGTCAA-AC GAG GTATTGGCTACCGA TTTTAGCCCCTGGCG galK 868159 - 867011 - | galactokinase galT 869208 - 868162 - | galactose-1-phosphate uridylyltransferase TERM 1132 868613 - 868647 + g 72 -2.6 -4.83615 | opp_overlap 868611, overlap 868614 CGCTGGACATAATCC ACCAGCATTGGCGAGC GCT GCTCGGCGAAGTAGGC TTTTTGTAAACGATC TERM 1133 868909 - 868879 - G 70 -5.3 -4.38712 | gap 1, overlap 868880 868882 868884 868887 GTGATCGGGAGAAAA GCAGATCACGCGGC TGGT GCCGCGCGCGCT-C TGACAGCGCATCAGC TERM 1134 868902 - 868887 - G 72 -11.8 -2.76909 | overlap 868884 868882 868879 868880 GAGAAAAGCAGATCA CGCGGC TGGT GCCGCG CGCGCTCTGACAGCG TERM 1135 869101 - 869118 + g 83 -9.8 -4.09685 | AGACGGCGTTTCCTG CGCCCC CTGCCA GGGGCG TTTTGCGCGATGCGG galE 870235 - 869219 - | UDP-galactose-4-epimerase TERM 1136 870428 - 870414 - R 100 -12.8 -5.44119 | TTTATCCGAAAAAAA GGCGCG TTA CGCGCC TGGGAATGAAACGGA SC0775 871366 - 870458 - | putative inner membrane protein TERM 1137 871495 - 871535 + r 73 -7.5 -4.08689 | opp_overlap 871508, overlap 871508 TCTTAATAAAAGGAG AGTGGTTCCAGAATGGCGC GCG GCGCCATTCTGATAATACA TTTAATTATTGCATC TERM 1138 871508 - 871522 + r 79 -11.4 -3.44794 | opp_overlap 871508, overlap 871495 AGAGTGGTTCCAGAA TGGCGC GCG GCGCCA TTCTGATAATACATT TERM 1139 871522 - 871508 - R 77 -11.4 -3.29263 | opp_overlap 871508 871495 AGAGTGGTTCCAGAA TGGCGC GCG GCGCCA TTCTGATAATACATT modF 873012 - 871537 - | putative molybdenum transport ATP-binding protein ModF TERM 1140 872464 - 872493 + g 95 -14.3 -3.61517 | CAGGGTCATACCCGC CTGGTTCAACGCC GTCA GGCGTTGCGCCAG TTGTTGACGGGCGGT TERM 1141 872885 - 872851 - G 77 -11.4 -3.61398 | gap 1 CTCGCCTGTTAATAA CGGCAGTTCACCCGC CAGCGC GCGGGCGAGC-GCCG ACTTCCCGCTCCCGT modE 873868 - 873080 - | DNA-binding transcriptional regulator ModE TERM 1142 873386 - 873402 + g 74 -7.9 -4.13767 | overlap 873374 GCTTTGCGCCGTCAG CGCGACT TTG AGCCGCG TTTTGCCGTCGGCCA TERM 1143 873917 - 873906 - g 74 -7.2 -4.18494 | overlap 873907 TATTGTGACTGAAAA GCGC GTCA GCGC AAAGCCGACCGCACA ybhT 873895 - 874146 + | hypothetical protein TERM 1144 874174 - 874157 - f 75 -9.8 -3.54424 | opp_overlap 874157 GCTGATTTCCCCAAA CGCCCG CTCAGT CGGGCG TTTTTGTTACTCAAG TERM 1145 874157 - 874174 + F 100 -9.8 -5.1356 | opp_overlap 874157 GCTGATTTCCCCAAA CGCCCG CTCAGT CGGGCG TTTTTGTTACTCAAG TERM 1146 874493 - 874531 + G 78 -12.2 -3.17529 | opp_overlap 874515, overlap 874492 874492 874494 ATTCGCCTCCTCTTC AACGCTGGCGCGCCAGAT AGA AGCGGGCGCGCCGGCGGA TCTGTTCATCTCTGC TERM 1147 874494 - 874530 + G 85 -15.7 -2.50035 | opp_overlap 874515, overlap 874493 874492 874492 TTCGCCTCCTCTTCA ACGCTGGCGCGCCAGAT AGA AGCGGGCGCGCCGGCGG ATCTGTTCATCTCTG TERM 1148 874597 - 874584 - g 85 -4.5 -5.26316 | overlap 874585 874586 GCAGCCGATAAAAAA GCGGT GGAT ACCAC GACGCGCGAAACATT modA 874302 - 875075 + | molybdate transporter periplasmic protein TERM 1149 875462 - 875480 + G 95 -8 -4.89852 | opp_overlap 875446 875457, overlap 875463 GCCGCCAGAACGCTG GGCGCCGG GCG CTGGCGCG TTTTTCTGACTATCA TERM 1150 875463 - 875479 + G 77 -11.5 -3.53188 | opp_overlap 875446 875457, overlap 875462 CCGCCAGAACGCTGG GCGCCGG GCG CTGGCGC GTTTTTCTGACTATC modB 875075 - 875764 + | molybdate ABC transporter permease protein modC 875767 - 876825 + | molybdate transporter ATP-binding protein ybhA 877644 - 876826 - | phosphotransferase TERM 1151 878074 - 878088 + G 83 -6.4 -4.84918 | GACCCATATTTCTAC CGATCA TCA TGGTCG TTTTGTCTTTGTCGG TERM 1152 878768 - 878750 - g 71 -4.5 -4.65895 | opp_overlap 878761 TTGCTGACGGAAAAA GGCCG TTATGCCGT CGGCC AGGGGCCAATGTGGG ybhE 877808 - 878803 + | 6-phosphogluconolactonase TERM 1153 878923 - 878889 - T 95 -13.5 -4.25104 | opp_overlap 878892, overlap 878890 878892 TTGCTTGCAGTAAAA CCACGGGCCGCCACA TCTGC TGCGGCGGCCCGTTT ATAAGCCTGAACCGG TERM 1154 878922 - 878890 - T 100 -17 -3.14848 | opp_overlap 878892, overlap 878889 878892 TGCTTGCAGTAAAAC CACGGGCCGCCACA TCTGC TGCGGCGGCCCGTT TATAAGCCTGAACCG TERM 1155 878920 - 878892 - T 100 -19.6 -3.13504 | opp_overlap 878892, overlap 878890 878889 CTTGCAGTAAAACCA CGGGCCGCCACA TCTGC TGCGGCGGCCCG TTTATAAGCCTGAAC TERM 1156 878892 - 878920 + T 100 -17.4 -3.87815 | opp_overlap 878892 878890 878889 CTTGCAGTAAAACCA CGGGCCGCCACA TCTGC TGCGGCGGCCCG TTTATAAGCCTGAAC ybhC 880230 - 878947 - | putative pectinesterase hutI 880468 - 881691 + | imidazolonepropionase TERM 1157 881777 - 881795 + G 71 -4.4 -4.56597 | overlap 881778 GCGTCTGTTTCAGAC CGTCACGC GCA GCGAGACC TTTTTCCCCGAAAAC TERM 1158 882212 - 882242 + G 85 -11 -4.0127 | overlap 882213 882222 GCCGTTTCGTCAACT GGCGCAGCTATGCG ACG CGCAGAGCCGCGCG TTTCATTATGCCTGT TERM 1159 882213 - 882241 + G 86 -14.5 -3.00039 | overlap 882212 882222 CCGTTTCGTCAACTG GCGCAGCTATGCG ACG CGCAGAGCCGCGC GTTTCATTATGCCTG hutG 881688 - 882629 + | formimidoylglutamase TERM 1160 883319 - 883331 + G 76 -9.1 -4.06419 | CGTCGTACAACCTGG TCCGC GTC GCGGA TTGTTTCTCACGCCC hutC 882722 - 883399 + | histidine utilization repressor hutC 883596 - 885281 + | urocanate hydratase TERM 1161 885893 - 885905 + G 75 -6.9 -4.41348 | overlap 885894 AGGCATCAACGGCCT TCGCG CTG CGCGG TTTGTTTGAGGCACA hutH 885283 - 886803 + | histidine ammonia-lyase TERM 1162 886831 - 886862 + T 90 -13 -3.53444 | GGCGCGGCGCTTATT CGGCTTACCCAACC CGTT GGTAGGGTAAGACG TTTACGCCGCCATCC ybhB 887364 - 886888 - | putative kinase inhibitor protein bioA 888711 - 887422 - | adenosylmethionine--8-amino-7-oxononanoate transaminase bioB 888798 - 889838 + | biotin synthetase TERM 1163 889873 - 889903 + G 71 -11.1 -2.97747 | gap 1, opp_overlap 889851, overlap 889850 CGATGCGCTGACGGC GCGTCGG-GCGACG GATA CGTTGCGCCGCCGC TATGTGGTATCGCAG bioF 889835 - 890992 + | 8-amino-7-oxononanoate synthase TERM 1164 891077 - 891062 - g 71 -10.4 -3.19602 | opp_overlap 891056, overlap 891060 CTCTTTACAGCAACA CAGCGC GGAT GCGCTG CTGACGCTGTTGACA TERM 1165 891444 - 891467 + G 73 -5.2 -4.56597 | opp_overlap 891449, overlap 891446 GCATGGCAGGCCGTC GATAATCGCG CTCA CGCGAATAGC TTTTTGCCGGAAGAG bioC 890976 - 891731 + | biotin biosynthesis protein BioC bioD 891724 - 892410 + | dithiobiotin synthetase TERM 1166 892432 - 892455 + F 71 -7.4 -3.90744 | overlap 892434 TTAAAAACCGCCTTC TTGCAGGATC TGAC GATCCTGCTG TTCTTTCGCCAGACC TERM 1167 892434 - 892453 + F 88 -12.2 -3.54488 | overlap 892432 AAAAACCGCCTTCTT GCAGGATC TGAC GATCCTGC TGTTCTTTCGCCAGA TERM 1168 892888 - 892874 - f 71 -10 -3.28712 | opp_overlap 892873 892872 CTGGTCTGGGGATAA CCAGCA CAC TGCTGG AATTTTACCCCGCGA TERM 1169 893820 - 893800 - g 70 -6.7 -4.14739 | CTATCTATCCCAAAA CGCACTACG TGA CGCCGCGCG AGCGTATTCTGCAGG TERM 1170 893913 - 893897 - g 74 -8 -3.9461 | GCTGGCGAATAATAA GCTGCT TGAAG AGCAGC GATTAAGCCAGCGCA uvrB 893061 - 895082 + | excinuclease ABC subunit B TERM 1171 895100 - 895124 + F 87 -10.7 -4.17089 | ATGTGTCGATCGCCA GCGAGTCATCG TTA CCATGGCTCGC TTTTGAGAATTTCAG TERM 1172 895291 - 895254 - f 100 -16.6 -3.2653 | opp_overlap 895259, overlap 895259 TTAATCACAACTGAA GAAAATTAGCGTTGAG GCTGAA CCCAACGCTAATTTTC CCTCTCTCCTCGGCT TERM 1173 895286 - 895259 - f 100 -10.7 -4.73635 | opp_overlap 895259, overlap 895254 CACAACTGAAGAAAA TTAGCGTTGAG GCTGAA CCCAACGCTAA TTTTCCCTCTCTCCT TERM 1174 895259 - 895286 + F 83 -9.3 -4.26589 | gap 1, opp_overlap 895259 895254 CACAACTGAAGAAAA TTAGCGTTGAGG CTGAA CC-CAACGCTAA TTTTCCCTCTCTCCT SC0797 895391 - 895564 + | putative cytoplasmic protein TERM 1175 897553 - 897529 - g 77 -3.8 -5.05301 | gap 1 AAATAAGGATAAAAA TTGCTGAAAAT AGGG ATTTTCA-CAA ATGGTTTGCGCTGTG slrP 895572 - 897836 + | leucine-rich repeat-containing protein TERM 1176 897897 - 897870 - T 85 -13.6 -2.95894 | gap 1, opp_overlap 897870, overlap 897862 897896 CAGAAGAGGGAGAGA GCCTGTTTAC-CC TTC GGTGTAAACAGGC TTCTGATAAGCGCAG TERM 1177 897870 - 897897 + T 90 -13.6 -3.40403 | gap 1, opp_overlap 897870 897862 897896 CAGAAGAGGGAGAGA GCCTGTTTAC-CC TTC GGTGTAAACAGGC TTCTGATAAGCGCAG ybhK 898839 - 897931 - | hypothetical protein TERM 1178 898879 - 898865 - H 70 -10 -3.049 | GAAGTCAAATAAGCA GCGCTA CAG TAGCGC AAGTCGCGGGTTTTC TERM 1179 899931 - 899941 + G 81 -2.4 -5.31275 | CCAGCGTAGTGATGG CCCG GCG CAGG TTTTTTGTCATCCCG moaA 899203 - 900225 + | molybdenum cofactor biosynthesis protein A moaB 900247 - 900759 + | molybdopterin biosynthesis, protein B TERM 1180 900795 - 900785 - g 77 -8.2 -4.09509 | ATTAACCCATATAAA CGCC GCA GGCG AAGCGCACATGGTGG moaC 900762 - 901247 + | molybdenum cofactor biosynthesis protein C moaD 901240 - 901485 + | molybdopterin synthase small subunit MoaE 901487 - 901939 + | molybdopterin synthase large subunit TERM 1181 902181 - 902194 + G 71 -8.1 -3.79864 | overlap 902179 902180 TGGCTTAATTATTGC CCAGC TTGC GCTGG TGTTTGTTCTGTCGG TERM 1182 902587 - 902559 - g 72 -2.5 -4.84529 | gap 1 GCAGAAACTGAAAAA TATCGGCGAGCA AATAGA TACCCGC-GATA GCGCTAATCTGCGTA ybhL 901987 - 902691 + | putative permease TERM 1183 902729 - 902711 - f 87 -10.3 -4.09864 | opp_overlap 902711 AGCGATCTCTTAAAA TCCTGGC CTTGC GCCAGGA TTTTTTTAGGACTAT TERM 1184 902711 - 902729 + F 100 -10.3 -5.42862 | opp_overlap 902711 AGCGATCTCTTAAAA TCCTGGC CTTGC GCCAGGA TTTTTTTAGGACTAT ybhM 902836 - 903543 + | putative integral membrane protein TERM 1185 903640 - 903670 + G 86 -9.9 -4.2558 | opp_overlap 903639 903638 903660 903661, overlap 903660 GTGAAGCTAAAGACG TCACTCG-CGCCATT AAA AATGGCGGCGAG-GA TTTTAATAAGAAATG SC0807 903567 - 904175 + | putative inner membrane protein TERM 1186 904659 - 904670 + T 73 -2.2 -5.252 | TTTTCCCGCTTACCA GATG AATA CGTC TTTTTTCTCAGCATA TERM 1187 904734 - 904708 - T 77 -7.3 -4.4009 | gap 1, opp_overlap 904708 TTTTACCGGATAAAA CGCGT-TGTGCT GGAA AGCGCAAACGCG TCTGCTTAAATTTAT TERM 1188 904708 - 904734 + T 70 -9.5 -2.9585 | gap 1, opp_overlap 904708 TTTTACCGGATAAAA CGCG-TTGTGCT GGAA AGCGCAAACGCG TCTGCTTAAATTTAT ybhN 905708 - 904746 - | hypothetical protein ybhO 906949 - 905708 - | cardiolipin synthase 2 TERM 1189 906378 - 906392 + g 73 -5.6 -4.64676 | opp_overlap 906368 906365, overlap 906379 AACAGCGCCTGCGCT TCGCCG GGG TGGCGG TTTTCTTCGGCCTGA TERM 1190 906764 - 906778 + g 80 -9.2 -4.07568 | overlap 906768 906770 TACTTCGGCTTTTAC GCCGCG CTG TGCGGC TTTTAGCAGAGCGGC TERM 1191 906768 - 906799 + g 77 -3.6 -5.0133 | overlap 906764 906770 TCGGCTTTTACGCCG CGCTGTGCGGCTTT TAGC AGAGCGGCATGGAG TTTTTTACCCACCTC ybhP 907704 - 906946 - | putative cytoplasmic protein TERM 1192 907131 - 907159 + g 74 -7.4 -4.08216 | gap 2, overlap 907131 907150 TGAATATCTCCTCCA GCCCGGCC-G-CGT TTA ACGGCGGGCCGGCC TTTTGCCGCCAGTCA TERM 1193 907846 - 907834 - H 70 -4.8 -4.46212 | overlap 907842 TGCTTCAGGAGAAAA GCCA TGAAG TGGC AACAACGCGTTCGTG TERM 1194 908147 - 908179 + G 85 -15.5 -2.65264 | overlap 908145 ATGTCTTGCTGGCGC TGGCGGGGCTGGCTA TCC TGGCCGGGCCCGCCG TGGTCTCGCTACTGG ybhQ 907837 - 908247 + | hypothetical protein ybhR 909315 - 908209 - | ABC transporter membrane protein ybhS 910561 - 909431 - | ABC transporter membrane protein ybhF 912290 - 910554 - | putative ABC-type multidrug transport system, ATPase component TERM 1195 911032 - 911020 - G 79 -3.3 -5.24531 | overlap 911021 911024 ACGCCGGAGAAAAAA CGCAG GTT CTGCT CAACCGTCAGGTTGC TERM 1196 911467 - 911477 + g 74 -2.4 -5.03314 | TGACGAATATCTGCT GCGG TCG CCTC TTTTTTCAGGATCAG TERM 1197 911948 - 911929 - G 71 -6.4 -4.23104 | opp_overlap 911929 GTAAATTCCAACAAA CGGGCAAA GGTC TTTTCCCG TATCTCGCCGGTAAC ybhG 913278 - 912283 - | hypothetical protein TERM 1198 912399 - 912413 + g 70 -7 -4.1196 | opp_overlap 912386, overlap 912392 912408 GATCGGTACGCAGAT CCGGCG TTT CGACGG TTTTCGGCGTAAATT ybiH 913952 - 913278 - | putative DNA-binding transcriptional regulator TERM 1199 915478 - 915463 - g 75 -6 -4.564 | AAGGCGAAACCAAAA CCGCGC ACAG GCGAGG GGAAACCCGCTGGCG rhlE 914182 - 915543 + | ATP-dependent RNA helicase RhlE TERM 1200 915587 - 915560 - f 78 -12 -3.03124 | gap 1, opp_overlap 915576 TTTTATCCGGCAACA TGCCCGGT-AGCG CGA CGCTTACCGGGCC TACGGACTATGCAAA TERM 1201 915997 - 915983 - g 78 -2.1 -5.27779 | GGGAAGAGCAAAAAA CACTG GTGGT CAGTA CCGCTAACGTGGCGT TERM 1202 917202 - 917191 - g 85 -2.2 -5.45802 | gap 1, opp_overlap 917192 917195, overlap 917192 GGCTTAAAAGAAAAA GCCGG CGA CCG-C TTTGTGGCGCTGGAT TERM 1203 917364 - 917350 - g 79 -2.8 -5.21709 | opp_overlap 917360 917361 CTGGAGAGCAAAAAA CATCAT GGT ATGCTG GTACTGTTCGCCAGC TERM 1204 917876 - 917866 - g 70 -3.2 -4.71222 | overlap 917872 917874 ATAGTAAAACCAAAA GCAA AAC CTGC ACGCCGCCGACGGCG dinG 915751 - 917895 + | ATP-dependent DNA helicase DinG TERM 1205 917878 - 917891 + F 71 -9.5 -3.24747 | opp_overlap 917874 917872 AAAGCAAAACCTGCA CGCCG CCGA CGGCG TTAATGCTGTGAGCA ybiB 917925 - 918899 + | hypothetical protein TERM 1206 918926 - 918905 - T 100 -13.7 -5.8187 | overlap 918884 TAGCGAATAAAAAAA GCCCGTCCA GTGA CGGACGGGC AAATAAGGGTAACAA ybiJ 919426 - 919055 - | hypothetical protein TERM 1207 919171 - 919206 + g 73 -6 -4.41844 | gap 1, overlap 919172 TAGCTTCCAGGCCAT CCAGCGTGGTGGC-GCC ATC GGCAGACACTACGCCGA TTTTATGCAGGTTTT ybiI 919865 - 919599 - | hypothetical protein TERM 1208 919936 - 919924 - R 88 -7.7 -5.0538 | opp_overlap 919924 919922 CGTCAGGTGAAAAAA TCGCA TCG TGCGA TCTTTTCAGACCATG TERM 1209 920748 - 920762 + r 79 -9.2 -4.15222 | GAGCTATGGTGTGAA GGCGGC GAA GTCGCC TTTATTAAAAAAAAT ybiO 923216 - 920994 - | hypothetical protein TERM 1210 921234 - 921209 - G 95 -14.1 -3.47349 | overlap 921202 TCGTTAAACCGACAA TACCGGCGAAC GTGG GTTCGCCGATA ATCAGCCCGCGAATA TERM 1211 923071 - 923084 + g 100 -3.7 -6.09888 | overlap 923070 923069 AGTACGTCAGCCAGG GCCGC ATAG GCCGC TTTTTTTTGTTCAGG TERM 1212 923212 - 923195 - G 84 -2.7 -5.39721 | gap 1, overlap 923196 CCAGTAGACAAAAAA GGATGAAC AGG GTCCA-CC GCATGACTCCTCCAG TERM 1213 923299 - 923330 + r 79 -12.2 -2.87211 | TGGGACTATTCCATG ATGCCCTTCCTGCC GCAG GGCTGGAAGGGCGA TATCTCAGGAGACGT glnQ 924057 - 923335 - | glutamine ABC transporter ATP-binding protein TERM 1214 923459 - 923471 + g 70 -9.1 -3.76224 | CGTGAGGCGACTTTT TCGGC AAA GCCGA TTTCGTGAGTGACAA glnP 924713 - 924054 - | glutamine ABC transporter permease protein TERM 1215 924841 - 924801 - R 73 -9.9 -3.40597 | gap 3, overlap 924799 924802 TCCGTCACGGAAAGA GCT-GTAGGCCCGGTGAGCG TCCT CACT-ACCGGGCC-ACAAGC CAACATCAGGTCGTT glnH 925603 - 924857 - | glutamine ABC transporter periplasmic protein TERM 1216 925286 - 925306 + g 76 -3.2 -5.06451 | opp_overlap 925286 ACCGCTTTTGTAATA GCCATCGG AAAAG TCGATCGC TTTTTTACGCTCGTC TERM 1217 925943 - 925925 - R 76 -7.4 -4.19953 | opp_overlap 925925 TATTTAAGTGCAAAA CCCCTG TGCCAGG CAGGGG TATAGGGATGACTTA dps 926583 - 926080 - | DNA starvation/stationary phase protection protein Dps SC0827 926872 - 926699 - | hypothetical protein ybiF 927773 - 926886 - | threonine and homoserine efflux system TERM 1218 927431 - 927412 - G 74 -2.8 -4.9138 | gap 1, overlap 927413 927416 ACGACCCAAATAAAA TC-TACCGG CCG CCGGGATGA AAACAGCGCGACCGC ompX 928127 - 928642 + | outer membrane protein X TERM 1219 928665 - 928682 + T 100 -9.1 -5.81412 | opp_overlap 928659 928665 GGTGAAAATGAAAAA TCCGCCT TTCG GGGCGGA TTTTTTTTGCCTGAA TERM 1220 928682 - 928665 - T 91 -8.4 -5.0925 | opp_overlap 928665, overlap 928659 GGTGAAAATGAAAAA TCCGCC TTTCGG GGCGGA TTTTTTTTGCCTGAA ybiP 930284 - 928710 - | hypothetical protein TERM 1221 929770 - 929759 - G 86 -7.2 -4.74103 | TGGCGAAGCGAAAAA CCGG ATAG CCGG TATCAATAACCTTAA TERM 1222 929823 - 929789 - G 76 -5.5 -4.70626 | CAATAACCTTAAAAA CGCCGCCCCAGGCCA GATTT TGTACCGGCGCGACG AAAAATGCCGCGACG TERM 1223 930260 - 930216 - G 75 -6.1 -4.62783 | overlap 930217 930219 930221 CAGCGACTGTAAAAA GTAGAGGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCCAGAAG TGAATCGATAAGGGT TERM 1224 930259 - 930217 - G 70 -9.6 -3.37188 | overlap 930216 930219 930221 AGCGACTGTAAAAAG TAGAGGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCCAGAA GTGAATCGATAAGGG TERM 1225 930257 - 930219 - G 78 -12.2 -3.25166 | overlap 930217 930216 930221 CGACTGTAAAAAGTA GAGGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCCAG AAGTGAATCGATAAG TERM 1226 930255 - 930221 - G 100 -19.2 -3.18433 | overlap 930219 930217 930216 ACTGTAAAAAGTAGA GGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCC AGAAGTGAATCGATA TERM 1227 930512 - 930486 - R 100 -8 -5.77632 | overlap 930489 930490 AAAACCACAAAAAAA CAGGGGAAATGG GCG CCATTTCCGTTG AGGATGCAAAATAAA TERM 1228 930508 - 930490 - R 76 -11.8 -2.54537 | overlap 930489 930486 CCACAAAAAAACAGG GGAAATGG GCG CCATTTCC GTTGAGGATGCAAAA TERM 1229 930547 - 930528 - R 82 -7.8 -4.6951 | opp_overlap 930527 930524 930528 AGGATGCAAAATAAA GCGGCG TACCGCAC CGCCGC GTTATTTCGTGGAAG SC0831 930677 - 930549 - | hypothetical protein mntR 930863 - 931336 + | manganese transport regulator MntR TERM 1230 931952 - 931966 + G 76 -2.8 -5.06414 | overlap 931953 TGGTGTGGAGTTGCC TGGCAT TAT ATGTCG TTTTTCTTACCGCGC ybiR 931333 - 932445 + | hypothetical protein TERM 1231 932474 - 932448 - T 100 -19.6 -3.03243 | opp_overlap 932438 932434, overlap 932451 ACTGATGCCGTAAGA GAAGCCCGATAG TGT CTATCGGGCTTC GCAGGCAGAGTCTGT TERM 1232 932471 - 932451 - T 100 -15.5 -3.66288 | opp_overlap 932438 932434, overlap 932448 GATGCCGTAAGAGAA GCCCGATAG TGT CTATCGGGC TTCGCAGGCAGAGTC ybiS 933409 - 932489 - | hypothetical protein TERM 1233 932669 - 932692 + g 74 -7.4 -4.15106 | gap 1 CACCTCAATGTAACG GCTACCGTCCG GCT CGG-TGGTGGC TTTTACCGGTTCATC TERM 1234 932961 - 932971 + g 85 -4.6 -5.15969 | overlap 932958 GCCGTAGGCGTCCAG GTCG GAC CGGC TTTTTTACGTTCAAC TERM 1235 934793 - 934770 - g 74 -7.4 -4.10453 | overlap 934771 TAAATGGTCGGAAAA CGCGCGTATT GGTT ACTACGCGCA GGACCACGAATATGA ybiT 933628 - 935223 + | ABC transporter ATPase ybiU 936610 - 935345 - | hypothetical protein ybiV(1) 936872 - 937681 + | HAD family hydrolase TERM 1236 937703 - 937686 - T 77 -11.3 -3.14211 | opp_overlap 937688 ATCCCTTCTGATTAA CAGGCCT GCGT AGGCCTG TTAAACGTAGCGCCA pflF 940191 - 937759 - | putative pyruvate formate lyase TERM 1237 938443 - 938457 + g 80 -4.2 -5.00616 | TTGACCGATAACGCC CTGTTC GAA GACCAG TTTTTTCACGGCGGC TERM 1238 938849 - 938861 + g 76 -10.5 -3.64703 | CGATAACCCCATTTC CCGCC GAC GGCGG TTTCGATACAGCCGA pflE 941096 - 940197 - | putative pyruvate formate lyase activating enzyme TERM 1239 941330 - 941348 + r 71 -7.4 -3.98915 | opp_overlap 941330 TTATCTGTTGATACA GCACGG CCATAAA CCGTGC TTTGGTATGTTTATC moeB 942123 - 941374 - | molybdopterin biosynthesis protein MoeB TERM 1240 941829 - 941866 + g 95 -14.9 -3.64703 | gap 1 TAATGGTAATATGCG GGTTGATTCGCGCCAGCG CGT CGCGGGCG-GACTCAACC TTTGGCTGCCCGACC moeA 943358 - 942123 - | molybdopterin biosynthesis protein MoeA ybiK 943562 - 944503 + | L-asparaginase TERM 1241 944541 - 944576 + GF 79 -10.4 -3.53012 | opp_overlap 944572 GATGAACTGGATAGC CGCGATGTTCTGTCCG TCAG TGGCCTGAATATCGCG TTTCACCACGAAGGG TERM 1242 946152 - 946164 + GF 72 -4.7 -4.59773 | overlap 946151 ATTGTTGAGATGGGG CCGCG GCG CGCCG TTTTTGAAAATCCGC yliA 944415 - 946385 + | glutathione transporter ATP-binding protein TERM 1243 946649 - 946636 - g 78 -2.3 -5.17576 | CATGAAGGTAAAAAA CGTCC TGGC GGAAG GCTATACCGTTTCTG TERM 1244 947898 - 947925 + G 70 -9.1 -3.71649 | ACAGTAAAAATTTGA CCGGTTTCTGG ATTATG CCGGATACCGG TTTCAGCTTTGACGA yliB 946418 - 947956 + | putative ABC transporter periplasmic binding protein TERM 1245 948421 - 948434 + G 83 -8.1 -4.42464 | GGTAGGAATGACGCT TGCCG TGAC CGGCA TTTCTTTCCCGGCTT yliC 948083 - 948937 + | putative ABC transporter periplasmic binding protein TERM 1246 949575 - 949609 + G 80 -5.1 -4.88918 | gap 1, opp_overlap 949582 GACGATTTTGTTTAG CCATATATTGCCGGGA ACGG TCTCGTCAAT-TGTGG TTTTCTTTACGATGC yliD 948940 - 949851 + | putative ABC transporter inner membrane component yliG 951267 - 949942 - | Fe-S oxidoreductase family protein 1 TERM 1247 951722 - 951747 + H 70 -5.3 -4.49556 | gap 1 CGCGCTGCGCCGTGC CGAAGGCGCGCT TGC AGC-CGCCGCCG TTTGTTTAATGAGCG etfB 953021 - 953875 + | putative electron transfer flavoprotein beta subunit TERM 1248 954204 - 954188 - g 74 -2.1 -5.00616 | CTCTTTTGGAAAAAA CTGTGCG CCA CGCTTAG CAGCAAAACTTGATG etfA 953886 - 954833 + | putative electron transfer flavoprotein alpha subunit SC0850 954866 - 955078 + | hypothetical protein acdC 955128 - 956291 + | putative acyl-CoA dehydrogenase TERM 1249 956642 - 956654 + F 72 -4.9 -4.59212 | CCATTTCATCTGTTT TATCA CTA TGATA TTTATTTCATTGGTT etfD 956740 - 958425 + | putative dehydrogenase (flavoproteins) TnpR 959824 - 958616 - | transposase of Tn10 ywfK 960575 - 959928 - | LysR family transcriptional regulator TERM 1250 960917 - 960929 + H 80 -5.5 -5.00616 | GGTCATCAGGTTAAC CCGTT TAC AGCGG TTTTTTCAGCCCCGG yliI 961697 - 962377 + | putative dehydrogenase yliJ 963000 - 962374 - | putative glutathione S-transferase TERM 1251 964034 - 964052 + G 77 -7.4 -4.2828 | CTGTCGTGCTGGGGG CGAAAACG GAC CGTATTCG TTTTAATGAGTCAGA dacC 963244 - 964446 + | D-alanyl-D-alanine carboxypeptidase fraction C TERM 1252 964451 - 964490 + T 100 -17.2 -3.18383 | gap 1, opp_overlap 964452 964453, overlap 964452 GGTTCTCGTAAAATA AC-TCCGTAGCCGGGTGCG CGT CGCATCCGGCTACGGGCGG TTAATACATCAGAGT TERM 1253 964452 - 964489 + T 100 -20.7 -2.50816 | gap 1, opp_overlap 964452 964453, overlap 964451 GTTCTCGTAAAATAA C-TCCGTAGCCGGGTGCG CGT CGCATCCGGCTACGGGCG GTTAATACATCAGAG TERM 1254 964487 - 964452 - T 100 -19.8 -4.17048 | gap 1, opp_overlap 964452 964451, overlap 964453 GTTCTCGTAAAATAA CTCCGTAGCCGGGTGCG CGT CGCATCCGGCTACGG-G CGGTTAATACATCAG TERM 1255 964487 - 964453 - T 100 -20 -3.09908 | opp_overlap 964452 964451, overlap 964452 TTCTCGTAAAATAAC TCCGTAGCCGGGTGCG CGT CGCATCCGGCTACGGG CGGTTAATACATCAG deoR 965249 - 964491 - | DNA-binding transcriptional repressor DeoR TERM 1256 965262 - 965307 + r 88 -5.5 -5.54264 | gap 1, opp_overlap 965270 965273, overlap 965270 965273 CATAGTTCCCCTGGA GAGTTAAAT-AAGCGCTCCGCA CCA TACAGAGCGCTTAATATTACTC TTTTTTTCGCTGTTT TERM 1257 965298 - 965270 - R 100 -14.7 -3.70902 | opp_overlap 965270 965262 965273, overlap 965273 CCCTGGAGAGTTAAA TAAGCGCTCCGCA CCA TACAGAGCGCTTA ATATTACTCTTTTTT TERM 1258 965270 - 965298 + r 71 -10.3 -2.62118 | opp_overlap 965270 965273, overlap 965262 965273 CCCTGGAGAGTTAAA TAAGCGCTCCGCA CCA TACAGAGCGCTTA ATATTACTCTTTTTT TERM 1259 965295 - 965273 - R 95 -12 -3.98913 | opp_overlap 965270 965262 965273, overlap 965270 TGGAGAGTTAAATAA GCGCTCCGCA CCA TACAGAGCGC TTAATATTACTCTTT ybjG 965995 - 965321 - | undecaprenyl pyrophosphate phosphatase mdfA 966242 - 967474 + | multidrug translocase ybjI 968343 - 967528 - | hypothetical protein TERM 1260 967921 - 967911 - G 100 -5.4 -5.47399 | opp_overlap 967911 CGAATTTGAAAAAAA CATC GCT GATG TTGTTGAAATTATCC TERM 1261 967964 - 967974 + g 77 -8.2 -4.10161 | opp_overlap 967960 967963 CGATGATAATACATT GCCG CAA CGGC TTTTAACGCATCGTC TERM 1262 967999 - 968014 + g 86 -6.8 -5.00616 | ATCGTCGTAGCGTTT CAGCGT GTAG GCGCTG TTTTTTCCACAGGCG ybjJ 969551 - 968340 - | hypothetical protein TERM 1263 969637 - 969656 + H 91 -8.6 -5.03314 | overlap 969636 TCATACTTCGTTGTG CAGACAGT TTTT GCTGTCTG TTTTTTCAGCGTAAG ybjK 969719 - 970339 + | paral regulator ybjL 972141 - 970456 - | hypothetical protein TERM 1264 971039 - 971027 - G 75 -4.1 -4.90778 | opp_overlap 971027 TGGATCGAAATAAAA CCAAT GCG ATCGG CGATGGTTTTTACTC TERM 1265 971199 - 971209 + g 71 -4.6 -4.57341 | overlap 971183 971182 971184 971204 CGAGGCGGCGACCGA CCGC ATT GTGG TTTTTCACCACAATT TERM 1266 971204 - 971222 + g 74 -7.5 -4.20516 | overlap 971184 971199 CGGCGACCGACCGCA TTGTGGT TTTTC ACCACAA TTTCTTCCGTCACGA ybjM 972412 - 972789 + | hypothetical protein TERM 1267 972817 - 972781 - T 90 -7.1 -5.41143 | overlap 972783 CACCGGCGAAAAAAA CGCCGATAGCGCCCTCC GGT AGAGGGCGTTGCCAGAG CAATCAGGCGAAAAG grxA 973084 - 972821 - | glutaredoxin 1 TERM 1268 973352 - 973391 + G 73 -10.7 -3.38604 | gap 1, opp_overlap 973375, overlap 973365 973369 GCTTAATCATTACCT TACGCT-GCCCGCGCCGT TCAAT ACGCCGCTGGCTGGCGTA TTGATGGTTTTCCTG TERM 1269 973365 - 973398 + G 84 -9 -4.26076 | gap 1, opp_overlap 973375, overlap 973352 973369 CTTACGCTGCCCGCG CCGTTCAATACGCCG CTGGC TGGCGTATTG-ATGG TTTTCCTGGGCGTCG TERM 1270 973369 - 973395 + G 76 -11.7 -3.13504 | opp_overlap 973375, overlap 973352 973365 CGCTGCCCGCGCCGT TCAATACGCCG CTGGC TGGCGTATTGA TGGTTTTCCTGGGCG ybjC 973254 - 973544 + | hypothetical protein TERM 1271 974260 - 974280 + F 73 -7.5 -4.19276 | CGCTAAAACCTGCGG GCCAGTGTA TGA TACGCGGGC TTTTCAGGGTTTTCA rimK 974308 - 975210 + | ribosomal protein S6 modification protein TERM 1272 975455 - 975469 + G 75 -5.7 -4.61482 | ATGCTAAAATCGATT TGGTG GACAA CACCA TTCTTTTTTCCGCGA ybjN 975307 - 975783 + | hypothetical protein TERM 1273 975791 - 975831 + F 88 -3.4 -5.67063 | gap 2, opp_overlap 975797 975800, overlap 975801 975802 TTCACTGATCCCTCC CGATAATCAGGCAGTCGC TGCCAGC GCGGCTG-CTGTTTA-CG TTTTTTTATGCTGCC TERM 1274 976402 - 976420 + G 83 -7.3 -4.57569 | GCCAGTTTTCTTGAG CGCCAGC TCACC GCGGGCG TTTTTCAGCCGCTGG potF 976132 - 977244 + | putrescine ABC transporter periplasmic substrate-binding protein potG 977332 - 978465 + | putrescine transporter ATP-binding subunit TERM 1275 979202 - 979216 + G 74 -4.9 -4.82901 | opp_overlap 979189, overlap 979197 AAGGCGGAATCATCG CCGGC TCGAT GCTGG TTTTTATCCCGGCGG TERM 1276 979291 - 979305 + G 71 -4.2 -4.65895 | overlap 979292 ATCATGATTGGTCGC GTCCTG TGG CAGGAG TTTTTCAATAACCGC potH 978475 - 979428 + | putrescine ABC transporter membrane protein TERM 1277 979718 - 979733 + G 71 -7.6 -3.96148 | TGGACGATTTCGCGG CGCAAA CGGC TTTGCG TTTATGATCACCGCG potI 979425 - 980270 + | putrescine ABC transporter membrane protein TERM 1278 980300 - 980324 + G 70 -7 -4.07568 | overlap 980303 TCCTCTATGGCAATG CGTTGCCGCG CGGGT CGCGGCATCA TTTTCAGGGAAGACA TERM 1279 980303 - 980321 + G 76 -11.7 -3.08032 | overlap 980300 TCTATGGCAATGCGT TGCCGCG CGGGT CGCGGCA TCATTTTCAGGGAAG ybjO 980254 - 980817 + | hypothetical protein rumB 980860 - 981990 + | 23S rRNA methyluridine methyltransferase TERM 1280 982085 - 982036 - f 100 -12 -4.86001 | gap 1, opp_overlap 982036 982037 982039 982043, overlap 982039 ACTATTTCATAAAAA TA-ATAAATACAACCAATTGATT ATTTA ATTCAATTGGTTGTATTTATATA TTATCCTATTTTTGC TERM 1281 982036 - 982085 + F 86 -12 -3.64164 | gap 1, opp_overlap 982036 982039, overlap 982037 982039 982043 ACTATTTCATAAAAA TA-ATAAATACAACCAATTGATT ATTTA ATTCAATTGGTTGTATTTATATA TTATCCTATTTTTGC TERM 1282 982037 - 982083 + F 85 -12.7 -3.38046 | opp_overlap 982036 982039, overlap 982036 982039 982043 CTATTTCATAAAAAT AATAAATACAACCAATTGATT ATTTA ATTCAATTGGTTGTATTTATA TATTATCCTATTTTT TERM 1283 982039 - 982081 + F 100 -15.3 -3.23454 | opp_overlap 982036 982039, overlap 982037 982036 982043 ATTTCATAAAAATAA TAAATACAACCAATTGATT ATTTA ATTCAATTGGTTGTATTTA TATATTATCCTATTT TERM 1284 982081 - 982039 - f 100 -15.3 -4.53475 | opp_overlap 982039 982037 982036 982043, overlap 982036 ATTTCATAAAAATAA TAAATACAACCAATTGATT ATTTA ATTCAATTGGTTGTATTTA TATATTATCCTATTT TERM 1285 982043 - 982077 + F 95 -11.7 -4.25389 | opp_overlap 982039 982036, overlap 982039 982037 982036 CATAAAAATAATAAA TACAACCAATTGATT ATTTA ATTCAATTGGTTGTA TTTATATATTATCCT ulaA 982273 - 983616 + | ascorbate-specific PTS system enzyme IIC SC0877 983646 - 983966 + | putative inner membrane protein TERM 1286 984424 - 984406 - g 77 -4.4 -4.96501 | TTCCACAAAAACAAA CCGGAGGC GGC GTTTCCGG GCTATGGCGTCATGA TERM 1287 985435 - 985415 - g 75 -3.9 -4.93877 | overlap 985418 TTTGATGAAAGAAAA TGATGCTCC GGC GGAGCAGTA TCGCCGTCTGGGTCT TERM 1288 985432 - 985418 - g 70 -10 -3.34291 | overlap 985415 GATGAAAGAAAATGA TGCTCC GGC GGAGCA GTATCGCCGTCTGGG SC0878 983976 - 985463 + | putative sulfatase TERM 1289 985525 - 985542 + T 72 -9.1 -3.58343 | opp_overlap 985514 AGTATTAGTCCGAAT CGCCTGT TGAT GCAGGCG TTTGAGACTGATGAC artJ 986412 - 985681 - | arginine ABC transporter ATP-binding protein TERM 1290 986555 - 986529 - R 100 -10.9 -5.68039 | opp_overlap 986527 986526 AAATGGATAAAAAAA GACGGACAGGT TAACC ACTTGTCCGTC AGATTTATTCAAAAT artM 987316 - 986648 - | arginine transporter permease subunit ArtM TERM 1291 987188 - 987158 - G 74 -8.3 -3.92542 | CGTACCGGTAAACAA CGTGATATAGCCG CGCAC CAGCCACACCACG AACGGCGTTTTTAGC TERM 1292 987252 - 987223 - G 70 -2.7 -4.6902 | overlap 987228 GGATAATGGTAAAAA CTAACGCCAGCAC CAAA GCGACGGCAATAG AAGCCACGGTCAGCG artQ 988032 - 987316 - | arginine transporter permease subunit ArtQ artI 988839 - 988039 - | arginine ABC transporter ATP-binding protein TERM 1293 988244 - 988274 + gr 70 -10.4 -2.54745 | overlap 988243 988242 CATTCGGTCACGACC GCCGTGTCGCCG AAAACAG CGTCGATACGGC CATTTTGTAGATCCA artP 989516 - 988788 - | arginine transporter ATP-binding subunit TERM 1294 989704 - 989674 - R 71 -7.7 -3.97709 | gap 1, opp_overlap 989674 AGTAGGTAAGAAGAA TTGTC-GGCATCCC GGGC AGAATGCCAGACAA TTTACGGGGTTATGG ybjP 990261 - 989746 - | putative lipoprotein SC0885 990389 - 990712 + | hypothetical protein TERM 1295 991296 - 991311 + G 73 -5.4 -4.55287 | gap 1, overlap 991290 TGGCGCCTGGCCTGA CGCC-CA GCG TGTGGCG TTTTATCTGGCTGGA ybjR 990709 - 991539 + | putative aminidase ybjS 992549 - 991536 - | putative nucleoside-diphosphate-sugar epimerase ybjT 994078 - 992645 - | hypothetical protein TERM 1296 993165 - 993178 + g 86 -3.8 -5.40014 | TCGTAGCCCCAGTCG CTGG AGTTCA CCAG TTTTTCTTCTTCTTT ltaA 995090 - 994089 - | L-threonine aldolase TERM 1297 994435 - 994445 + g 71 -8.2 -3.86202 | overlap 994434 ACCATTTTACGCCAG CGCG TCG CGCG TTTAATGTAATCGCG TERM 1298 994771 - 994826 + g 83 -12.6 -3.16039 | GGCAGCGTACCGTCC GC-GGCGGCGTCGATGG-GCTGCGGCTG AATG CTGCCG-AGCACCGCCG-CGCCGCCAGC TTCATAGAGATAATT poxB 996847 - 995129 - | pyruvate dehydrogenase TERM 1299 996243 - 996268 + g 76 -3.2 -5.09173 | overlap 996249 ATCAATGCGATATTG CTGGAGTAGC GCAGCA GTTGCGCCAG TTTTTTCAGCTCTTC TERM 1300 996678 - 996633 - G 83 -12.7 -3.25823 | opp_overlap 996652 996677 CCCGGTCCACATGAA CCGGCGCACACTGC-CAGCTC GCCGGT AAGCTGCGCT-TGTGCGCCGG CGGCGAAAGCGGCGA hcr 997976 - 997005 - | HCP oxidoreductase, NADH-dependent hcp 999637 - 997985 - | hydroxylamine reductase TERM 1301 999443 - 999431 - G 85 -6.9 -4.83615 | overlap 999432 CAGCGTGGAGAAAAA CGCGC GCG GCGCA AAGTTATCAACGTCG ybjE 1000680 - 999781 - | hypothetical protein TERM 1302 1000093 - 1000076 - G 70 -9.1 -3.62572 | opp_overlap 1000081 1000086 GAGTACCAGCCGAAA CCTGACG CCAT CGCCAGG GCGGTTTTTAGCGGT TERM 1303 1000520 - 1000500 - G 84 -6.1 -4.99435 | CGGAATAATGAAAAA TCGCCACCA GAT TACTGGCGA GGTTATCCAAAAACG TERM 1304 1001000 - 1000987 - g 70 -6.7 -4.08064 | AACGCCTGGGGAAAA TCCAG CCTG CTGGA TGCGCTGACTCTGTT TERM 1305 1001243 - 1001267 + G 70 -5 -4.42386 | gap 1, overlap 1001244 GCGAATGCGGCGCCG ATG-GCAGCGT GATG ACGCTGCGCAG TTTTCTCAATAGCGA TERM 1306 1001358 - 1001370 + G 80 -10.5 -3.87641 | overlap 1001366 GCCAGTGCTACGTTT GCGCG ATG CGCGC TTTATGCGACGTATT TERM 1307 1001661 - 1001650 - g 71 -7.2 -3.93695 | CGGATGATCGACAAA CCGG GCAG CCGG TCGCATCGGGTGATC TERM 1308 1001661 - 1001686 + G 70 -5.3 -4.38154 | CAAACCGGGCAGCCG GTCGCATCGGG TGAT CCTGCTGGGAC TTTTCTCCACGCTGT TERM 1309 1001953 - 1001988 + G 70 -9 -3.73224 | gap 1, opp_overlap 1001961, overlap 1001966 CCGGGCGGGTTAAGC GCGGAAGATGGACGGCG CAT CGCCTTTCATAT-CCGC TTTAATCGCGCATCG TERM 1310 1001966 - 1001976 + G 71 -8.2 -3.85114 | opp_overlap 1001961, overlap 1001953 GCGCGGAAGATGGAC GGCG CAT CGCC TTTCATATCCGCTTT ybjD 1000882 - 1002540 + | hypothetical protein ybjX 1003505 - 1002537 - | virK TERM 1311 1004032 - 1004004 - g 76 -10.3 -3.64822 | AGCCGCTGAGTTAAA GCTGGCGCG GGTTACGCTGG CGCGCCAGC AGCAGTTAGCTAAGA ybjY 1003633 - 1004751 + | macrolide transporter subunit MacA TERM 1312 1006583 - 1006598 + G 86 -6.8 -5.0916 | overlap 1006584 CGGTTTTTCACTGAC TGCGCT GGCG AGCGCG TTTTTATGTTCGACG ybjZ 1004748 - 1006694 + | macrolide transporter ATP-binding /permease protein TERM 1313 1006767 - 1006787 + T 95 -12.6 -4.21462 | opp_overlap 1006767 GGCGTTAAATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTCCTGGAT TERM 1314 1006787 - 1006767 - T 100 -12.6 -5.27335 | opp_overlap 1006767 GGCGTTAAATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTCCTGGAT cspD 1007045 - 1006824 - | CspA-like protein TERM 1315 1006898 - 1006916 + g 70 -8.8 -3.63305 | opp_overlap 1006899, overlap 1006899 CCTGGTGGACATCAA ACCGGACA GAC TGTCCGGC TTTAAGCGTTCTGTA TERM 1316 1006899 - 1006915 + g 72 -12.3 -2.77501 | opp_overlap 1006899, overlap 1006898 CTGGTGGACATCAAA CCGGACA GAC TGTCCGG CTTTAAGCGTTCTGT TERM 1317 1006915 - 1006899 - G 86 -12.3 -3.83026 | opp_overlap 1006899 1006898 CTGGTGGACATCAAA CCGGACA GAC TGTCCGG CTTTAAGCGTTCTGT TERM 1318 1007481 - 1007491 + G 75 -6.8 -4.45738 | opp_overlap 1007481 TCAATGATGACTACA CTCC GAT GGAG TTTGTTATTGACGTG TERM 1319 1007610 - 1007579 - g 71 -8 -3.79043 | gap 1, overlap 1007574 CACTATCAAGGCAAA GCCATCTGCGGCG TGTTCAC CGCCG-AGGTGGC GGAAACCAAAGTGGC clpS 1007369 - 1007689 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1320 1008322 - 1008299 - g 73 -5.2 -4.56775 | opp_overlap 1008299 1008302, overlap 1008302 ATTGGTCGTGAAAAA GAACTGGAAC GCGC GATCCAGGTC TTGTGTCGTCGCCGT TERM 1321 1008319 - 1008302 - g 70 -5.5 -4.40561 | opp_overlap 1008299 1008302, overlap 1008299 GGTCGTGAAAAAGAA CTGGAAC GCGC GATCCAG GTCTTGTGTCGTCGC TERM 1322 1008392 - 1008381 - g 74 -7.2 -4.07568 | CCGGCGTCGGCAAAA CGGC GATT GCCG AAGGGCTGGCCTGGC TERM 1323 1008660 - 1008644 - g 73 -9.4 -3.7795 | GCAAATCTGATTAAA CCGCTG CTTTC CAGCGG TAAGATCCGGGTGAT TERM 1324 1009064 - 1009038 - g 70 -8.7 -3.6543 | overlap 1009036 1009054 GAATTCCTGAAAAGA GCGTCTCGCAA AGCGA TCGCGATACGC TGAAGAACCTGGGCG clpA 1007720 - 1009996 + | ATP-dependent Clp protease ATP-binding subunit TERM 1325 1010037 - 1010020 - T 80 -9.8 -3.86346 | opp_overlap 1010020 TCACTGCCGTACAAA CCGGGC CTTAGC GCCCGG TTTTTTTACGCCGGC TERM 1326 1010020 - 1010037 + T 100 -9.8 -5.40072 | opp_overlap 1010020 TCACTGCCGTACAAA CCGGGC CTTAGC GCCCGG TTTTTTTACGCCGGC SC0901 1010406 - 1010209 - | hypothetical protein SC0902 1010945 - 1010568 - | integrase remnant TERM 1327 1011103 - 1011084 - R 93 -10 -4.61199 | opp_overlap 1011082 1011084 AGTTTAGATACAAAA GCCCGTAC TTTC GTACGAGC TCTTTCTTGAATATG SC0903 1011422 - 1011072 - | hypothetical protein TERM 1328 1011261 - 1011271 + g 77 -4.6 -4.96848 | AGCTCTGTTCAAAAA CGCT CCC GGCG TTTTTGTGTCGAACC TERM 1329 1011359 - 1011340 - G 100 -10 -4.9755 | ACATATAAGCAAAAA GCCCGTAC TTCT GTACAGGC TCTCAACTTAAATAT TERM 1330 1011603 - 1011580 - R 95 -13.2 -3.69364 | gap 1 ATGCAATAGACATAA TCCCCGC-CCA AAC TGGCGCGGGGA GGCAAATTAGCGCTG ycaC 1012287 - 1011610 - | slsA in STM SC0905 1013167 - 1012307 - | putative cytoplasmic protein TERM 1331 1012334 - 1012360 + g 74 -7.3 -4.09455 | opp_overlap 1012338 AAAACGGCCGGAGTT GAAATCGCGGA CTGCT TCTGCGATCTC TTGTTTCGTGTTCAT TERM 1332 1012975 - 1013002 + g 100 -9.9 -4.8622 | gap 1, opp_overlap 1012975 1012974 TCACGGTCTCGAAAC CGCGGTG-TGGA TGCTC TCCAACGCCGCG TTTTTCATTACCCGG yafC 1013276 - 1014187 + | LysR family transcriptional regulator TERM 1333 1014225 - 1014241 + T 76 -7.9 -4.36914 | opp_overlap 1014225 AATGGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTATCCAGCCGCC TERM 1334 1014241 - 1014225 - T 100 -10.1 -5.10497 | opp_overlap 1014225 AATGGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTATCCAGCCGCC infA 1014496 - 1014278 - | translation initiation factor IF-1 SC0908 1014807 - 1014424 - | putative inner membrane protein TERM 1335 1014841 - 1014794 - GR 89 -2.8 -5.46657 | gap 1, overlap 1014795 CACCCCAATAAAAAA TGTGCCGAAAACATTCACTTCCG GGG CAAAAAT-AATGTCCGCGGCACC CAAAAACGGGAGGCC aat 1015512 - 1014808 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1336 1015010 - 1014999 - G 74 -2.2 -5.05782 | gap 1, opp_overlap 1015000, overlap 1015000 ATTCAGCGCAAAAAA CCAGC AGT GC-GG TTTTGGAGGCATTCT TERM 1337 1015078 - 1015057 - G 70 -6.5 -4.08216 | overlap 1015059 CGATTCGCCGCAAAA TAGCGCCCC CTGC GAGACGCCA TACATCCCGCCGACC TERM 1338 1015384 - 1015366 - G 80 -8.8 -4.07568 | overlap 1015367 1015369 GTCGCCCGGCGAAAA CCACGGGA AAA TCCCGTGC TGGTAGGCCATTAAC TERM 1339 1015383 - 1015367 - G 76 -12.3 -3.04398 | overlap 1015366 1015369 TCGCCCGGCGAAAAC CACGGGA AAA TCCCGTG CTGGTAGGCCATTAA cydC 1017278 - 1015557 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1340 1016451 - 1016433 - G 86 -9.5 -4.27117 | opp_overlap 1016445, overlap 1016410 CGCGCAGAAGACAAA CAGCGCG ATGAG CGCGCCG GGCTGCGTATTGCCG cydD 1019045 - 1017279 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1341 1017319 - 1017334 + g 71 -11.8 -2.53263 | opp_overlap 1017309 1017319 AATAACGTCGCAAAA GCGCCG TTGG CGGCGC TGAGTTCGGCATAAC TERM 1342 1017334 - 1017319 - G 91 -11.8 -4.12599 | opp_overlap 1017319, overlap 1017309 AATAACGTCGCAAAA GCGCCG TTGG CGGCGC TGAGTTCGGCATAAC TERM 1343 1017890 - 1017914 + g 70 -9.9 -3.41051 | AGCTTTTACCGGAAC CGCTGCGTCCT ACC AGGACGGCGCG TTCTCCTGCCGCTAA TERM 1344 1018299 - 1018284 - G 73 -5.4 -4.63184 | overlap 1018271 AAGCGAGGTGAAAAA TTCCAG CACG CCGGAA GATAAAAAGGCGAGG TERM 1345 1018318 - 1018308 - G 74 -2.4 -5.0916 | GCCGGAAGATAAAAA GGCG AGG CGCA GTACTTCCATCGTGC TERM 1346 1018459 - 1018435 - G 75 -5.8 -4.65078 | gap 2 AGACGGTCAAGAAAA TGGCCGCTTAGC CGG GC-AAGC-GCCA GGAAATTGCGGCGGT TERM 1347 1019112 - 1019128 + r 100 -12.3 -5.52347 | opp_overlap 1019112 CGACGCAAAAATAAA GGCGACT TAT AGTCGCC TTTTTTACTTTTGTT TERM 1348 1019128 - 1019112 - R 100 -12.3 -4.89063 | opp_overlap 1019112 CGACGCAAAAATAAA GGCGACT TAT AGTCGCC TTTTTTACTTTTGTT trxB 1020127 - 1019159 - | thioredoxin reductase lrp 1020673 - 1021167 + | leucine-responsive transcriptional regulator TERM 1349 1021221 - 1021257 + F 95 -11.6 -4.13767 | gap 1, opp_overlap 1021223 1021227, overlap 1021224 1021227 TCCTGTTAATCCATA CAG-CAACAGTGCCGGG GCAA CCCGGTGCTGTTGTCCG TTTTAGCATCGGGCG TERM 1350 1021224 - 1021253 + F 95 -16.5 -2.75577 | opp_overlap 1021223 1021227, overlap 1021221 1021227 TGTTAATCCATACAG CAACAGTGCCGGG GCAA CCCGGTGCTGTTG TCCGTTTTAGCATCG TERM 1351 1021227 - 1021250 + F 88 -12.4 -3.52113 | opp_overlap 1021223 1021227, overlap 1021224 1021221 TAATCCATACAGCAA CAGTGCCGGG GCAA CCCGGTGCTG TTGTCCGTTTTAGCA TERM 1352 1022482 - 1022468 - g 72 -11.4 -3.09492 | overlap 1022476 1022477 TGCTCAACCGCAAGA GGCGCA AAG TGCGCC GTGGCAGCAACCTGT TERM 1353 1022811 - 1022796 - g 77 -8.2 -4.19624 | GAGGTGGAAGAGAAA CGCGCC CGTG AGCGCG AACAACTGGCGGCAT TERM 1354 1022966 - 1022993 + G 90 -12.6 -3.84825 | opp_overlap 1022953, overlap 1022967 GAGTGGCGCCCTGGC AGCAGGCGCCGC GGCC GCTGCGCCTGCA TTTAGTCTGGCTACC TERM 1355 1022967 - 1022992 + G 87 -16.1 -2.90573 | opp_overlap 1022953, overlap 1022966 AGTGGCGCCCTGGCA GCAGGCGCCGC GGCC GCTGCGCCTGC ATTTAGTCTGGCTAC TERM 1356 1023162 - 1023147 - g 91 -6.8 -5.19328 | gap 1, overlap 1023148 1023149 ATTGCAGAAGAAAAA GC-CCGC GAG GCGGAGC GCAATCAGTACGAGA ftsK 1021245 - 1025378 + | DNA translocase FtsK lolA 1025518 - 1026132 + | outer-membrane lipoprotein carrier protein TERM 1357 1026867 - 1026881 + G 74 -7 -4.25104 | overlap 1026870 GACCGAGATCGCCGG CGAGCG CAG CGCGCG TTTTGATAACAAAGG ycaJ 1026142 - 1027485 + | recombination factor protein RarA TERM 1358 1027654 - 1027670 + F 71 -9.5 -3.18582 | AAAACGTCGCTATTA CGTAAAC GCG GTTTACG TTCATCAATACAATC TERM 1359 1028526 - 1028537 + G 71 -7.2 -4.03167 | opp_overlap 1028525 GCCGATTAAAATGAC GGCG CATA CGCC TTGTTTCCGTTCTGA TERM 1360 1028898 - 1028886 - g 77 -4.8 -4.8543 | CAAGTCCGACAAAAA GACC CGTCT GGTC CATACCCTGAATGGT serS 1027744 - 1029036 + | seryl-tRNA synthetase TERM 1361 1029075 - 1029062 - f 93 -9.5 -4.56597 | opp_overlap 1029062 CTCCTCTTCTAAAAA GCGCC TTCG GGCGC TTTTTTTATGCCAGT TERM 1362 1029062 - 1029075 + F 100 -9.5 -5.61596 | opp_overlap 1029062 CTCCTCTTCTAAAAA GCGCC TTCG GGCGC TTTTTTTATGCCAGT TERM 1363 1030019 - 1030006 - g 71 -9.5 -3.54638 | ATAACCCTGGCGAAA CCCGC ATGA GCGGG GGCGGTGTAACCTAT dmsA 1029273 - 1031717 + | anaerobic dimethyl sulfoxide reductase, subunit A dmsB 1031729 - 1032346 + | anaerobic dimethyl sulfoxide reductase, subunit B TERM 1364 1032614 - 1032626 + G 76 -3.3 -5.0538 | opp_overlap 1032611 GAGCAATGAAATTGC CAGCG GCT CGGTG TTTTTTGCGGTCGGC SC0920 1032348 - 1033211 + | anaerobic dimethyl sulfoxide reductase, subunit C TERM 1365 1033265 - 1033212 - f 70 -9.6 -3.07816 | gap 1, opp_overlap 1033220 1033221 GCGGTAGCCAGCTAA CGCGTTGACGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATACGCCTTTA-GCC ACCATCAATCTAAGG TERM 1366 1033220 - 1033258 + F 100 -17.5 -3.53811 | opp_overlap 1033212, overlap 1033221 CAGCTAACGCGTTGA CGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATACGCC TTTAGCCACCATCAA TERM 1367 1033221 - 1033257 + F 100 -21 -2.72144 | opp_overlap 1033212, overlap 1033220 AGCTAACGCGTTGAC GCGCATTCGGCCTGCA GAACG TGCAGGCCGAATACGC CTTTAGCCACCATCA SC0921 1033241 - 1033348 + | hypothetical protein TERM 1368 1034282 - 1034305 + G 80 -8.8 -4.08767 | GCATCGGTTTCTGGA TGGCGGTGCT GGTG AGCGCCGGCA TTTTGGGGCAATGGC ycaD 1033561 - 1034709 + | MFS family transporter TERM 1369 1034722 - 1034751 + F 100 -10.1 -4.77047 | overlap 1034724 TGACTGTTCTCTGAA TCGTATGCAGGAC GTGA GTCTTGCATACTA TTTGTTTATGTTTTA TERM 1370 1034724 - 1034749 + F 95 -12.7 -3.95749 | overlap 1034722 ACTGTTCTCTGAATC GTATGCAGGAC GTGA GTCTTGCATAC TATTTGTTTATGTTT TERM 1371 1034974 - 1034948 - g 70 -3 -4.73388 | gap 1, opp_overlap 1034962 1034965, overlap 1034965 AATGTGCAGGAAAAA CAGTTGCGATG GTACAA CATCGCC-CTG ATGTCGTTTATTACC TERM 1372 1035408 - 1035428 + G 72 -4 -4.71223 | overlap 1035399 GGTCTGTGGCCGGAA TTGCCATG TTTAT CATGTCAA TTTTATATGTTGTGA TERM 1373 1035838 - 1035850 + G 70 -3.3 -4.70583 | TACTCTGGGGCAAAT CGCCG CGC TGGTG TTTTCTATTGATGCG ycaM 1034927 - 1036348 + | amino acid APC transporter TERM 1374 1036365 - 1036387 + T 73 -7.7 -4.19238 | gap 1 GACGCTCTTTTCCAC GGCGCTC-CT GTCA GGCGAGCGCC TTTTAAGGTTACAGG TERM 1375 1036592 - 1036613 + T 86 -11.6 -3.53444 | opp_overlap 1036592 ATCCAGACAGCAAAA CGGCTACC GTCATG GGTAGCCG TTTAAAAGCGGGTAA TERM 1376 1036613 - 1036592 - T 100 -11.6 -4.39568 | opp_overlap 1036592 ATCCAGACAGCAAAA CGGCTACC GTCATG GGTAGCCG TTTAAAAGCGGGTAA pflA 1037438 - 1036641 - | pyruvate formate lyase-activating enzyme 1 SC0925 1037566 - 1037730 + | hypothetical protein sopD 1038014 - 1038973 + | homologous to secreted protein sopD TERM 1377 1039017 - 1038977 - T 74 -3.4 -4.9725 | gap 1, opp_overlap 1038988 1039015, overlap 1038988 ATGCTTATATAAAAA GTCATTAAAAAGGCCCCAC TGAT ATGGAGCCTTTTTTGT-AC GCTTTTTATGGCGTA TERM 1378 1038988 - 1039007 + T 84 -4.9 -5.28826 | opp_overlap 1038977 1038988 AAAAGTCATTAAAAA GGCCCCA CTGATA TGGAGCC TTTTTTGTACGCTTT TERM 1379 1039007 - 1038988 - T 84 -7.8 -4.79667 | opp_overlap 1038988, overlap 1038977 AAAAGTCATTAAAAA GGCCCCAC TGAT ATGGAGCC TTTTTTGTACGCTTT pflB 1041331 - 1039049 - | pyruvate formate lyase I, induced anaerobically TERM 1380 1039468 - 1039482 + g 71 -4.2 -4.65916 | CAGCGCGACGACCAT CCGG GGTGTTA CCGG TTTTCTTGCCATACA focA 1042368 - 1041391 - | formate transporter TERM 1381 1042601 - 1042581 - R 100 -10.4 -5.26247 | gap 1, opp_overlap 1042581 CGAAAATAAATAAAA CGGGGCCGC AAAG GCG-CCCCG TAATATAACGCAGCC TERM 1382 1042581 - 1042601 + r 71 -10.4 -2.62184 | gap 1, opp_overlap 1042581 CGAAAATAAATAAAA CGGGGCCGC AAAG GCG-CCCCG TAATATAACGCAGCC ycaO 1044488 - 1042653 - | hypothetical protein TERM 1383 1042799 - 1042768 - G 83 -5.7 -4.85599 | gap 1 GGTAGTCCATAAAAA GCCG-CTTCACCGC TAAGC GCGGCGCTGGCGGC CTCTACAGCCTCTGC TERM 1384 1044202 - 1044215 + g 81 -3.7 -5.14563 | overlap 1044195 1044209 TATTCGCCCAGCGCC GAGGC CAGC GCCGC TTTTTTGGTCGCGCC ycaP 1044550 - 1045242 + | hypothetical protein serC 1045428 - 1046516 + | phosphoserine aminotransferase TERM 1385 1046529 - 1046549 + F 100 -10.4 -5.48623 | TAATACGTTTTTCAT CCCCACGG CCAGT CTGTGGGG TTTTTATTTCTGTTT TERM 1386 1047029 - 1047048 + G 70 -7 -4.07568 | opp_overlap 1047025 CAGGAAAACTATCCG CCCCTGCG TCTG CGCGGCGG TTTTACCGGCGGCGA aroA 1046582 - 1047865 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1387 1047960 - 1047975 + F 81 -3.3 -5.33785 | opp_overlap 1047960 TTGTTGATGATTTAA CACAT TGATTT ATGTG TTTTTTATAATAGTT ycaL 1048008 - 1048769 + | putative Zn-dependent protease with chaperone function cmk 1048942 - 1049625 + | cytidylate kinase TERM 1388 1049911 - 1049901 - g 87 -8.2 -4.63527 | overlap 1049903 TGAGCAGTTCAAAAA CGCC CAG GGCG AACTGGAAATCCAGG rpsA 1049737 - 1051410 + | 30S ribosomal protein S1 TERM 1389 1051519 - 1051489 - f 85 -12.7 -3.33696 | gap 1, opp_overlap 1051496, overlap 1051492 1051496 TCGGCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATCTCACGGCTGCA TERM 1390 1051517 - 1051492 - f 93 -15.5 -2.84098 | opp_overlap 1051496, overlap 1051489 1051496 GCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATCTCACGGCTG TERM 1391 1051513 - 1051496 - f 90 -14.1 -3.30554 | opp_overlap 1051496, overlap 1051492 1051489 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATCTCACG TERM 1392 1051496 - 1051513 + F 86 -14.1 -3.20382 | opp_overlap 1051496 1051492 1051489 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATCTCACG ihfB 1051566 - 1051850 + | integration host factor subunit beta TERM 1393 1051873 - 1051903 + F 89 -11.3 -4.0371 | opp_overlap 1051881, overlap 1051874 1051881 CGCAAAACTTGAACC CGAAAAAAGCACC GTCAG GGTGCTTTTTTCA TTTATATGACCCGTC TERM 1394 1051874 - 1051902 + F 88 -14.8 -3.01905 | opp_overlap 1051881, overlap 1051873 1051881 GCAAAACTTGAACCC GAAAAAAGCACC GTCAG GGTGCTTTTTTC ATTTATATGACCCGT TERM 1395 1051895 - 1051881 - f 87 -7.1 -5.09426 | opp_overlap 1051874 1051873 1051881 TTGAACCCGAAAAAA GCACC GTCAG GGTGC TTTTTTCATTTATAT TERM 1396 1051881 - 1051895 + F 90 -7.1 -5.4387 | opp_overlap 1051881, overlap 1051874 1051873 TTGAACCCGAAAAAA GCACC GTCAG GGTGC TTTTTTCATTTATAT SC0937 1051963 - 1052364 + | putative cytoplasmic protein TERM 1397 1053186 - 1053150 - g 100 -16.1 -3.54741 | opp_overlap 1053157, overlap 1053152 1053157 CACCAGGCCCTGAAA TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA GACAAAAAACTGTCA TERM 1398 1053184 - 1053152 - g 100 -16.5 -3.35046 | opp_overlap 1053157, overlap 1053150 1053157 CCAGGCCCTGAAATA CAAAACGCCCGATGA TGT TCATCAGGCGTTTTA CAGACAAAAAACTGT TERM 1399 1053179 - 1053157 - g 100 -14.2 -4.78848 | opp_overlap 1053157, overlap 1053152 1053150 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA TERM 1400 1053157 - 1053179 + G 91 -12 -4.07568 | opp_overlap 1053157 1053152 1053150 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA yis 1052535 - 1053218 + | putative integrase protein SC0939 1053493 - 1053822 + | hypothetical protein TERM 1401 1054684 - 1054698 + F 72 -8.5 -3.741 | overlap 1054682 GGTACCTGACCGATC GCGCG TTAGC CGCGC TATTTTACCTGTTGA SC0940 1054751 - 1054951 + | hypothetical protein TERM 1402 1055038 - 1055055 + F 76 -7.7 -4.21194 | opp_overlap 1055037, overlap 1055041 TGCGCTGGCATAATC TGACGCC GGAG GGCGTTA TTTTGAGTCATGAGC TERM 1403 1055041 - 1055052 + F 74 -7.2 -4.22883 | opp_overlap 1055037, overlap 1055038 GCTGGCATAATCTGA CGCC GGAG GGCG TTATTTTGAGTCATG msbA 1055697 - 1057445 + | lipid transporter ATP-binding/permease protein TERM 1404 1057664 - 1057654 - g 70 -6.8 -4.07568 | TTGGCTGGTGGAAAA GCTG CAA CAGC GTGGCGTGCGCGTGG TERM 1405 1058044 - 1058007 - g 80 -9.1 -4.08216 | gap 1 CCAGTCGCCTGAAAA CCGTA-GACGCCGCTATC GTC AATGGCGGCGTCGCCCGG GTGGGCGAAATCCCC lpxK 1057442 - 1058419 + | tetraacyldisaccharide 4'-kinase TERM 1406 1058551 - 1058534 - g 71 -4.7 -4.65895 | opp_overlap 1058546, overlap 1058535 1058536 GGGGCTATTGAAAAA GCCGCGC CGTA GCGCGAT GCCTGGCGATGTTCT ycaQ 1058463 - 1059695 + | putative cytoplasmic protein ycaR 1059702 - 1059929 + | hypothetical protein SC0946 1060687 - 1059986 - | hypothetical protein kdsB 1059926 - 1060672 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 1407 1060714 - 1060678 - Gf 73 -10.9 -2.74371 | opp_overlap 1060675, overlap 1060675 1060712 AATGCGTTAACATGA TCCTGTTCATGATCGTC TTA GACGGTCATGAACAGCG CGGTATGATAGCGCA TERM 1408 1060769 - 1060782 + FH 70 -5.3 -4.45077 | TCAGTGGCGGCTTTC TCGTA CCGT TACGA TTTTCCTCATTTTTC TERM 1409 1060968 - 1060958 - g 74 -8.2 -4.05446 | opp_overlap 1060958 1060957 1060965 TGCGTGAATGAGAAA GCGG ATT CCGC ATTGTGGTCATTATA ycbJ 1060883 - 1061776 + | hypothetical protein ycbC 1062532 - 1061756 - | hypothetical protein TERM 1410 1062091 - 1062069 - G 70 -9.8 -3.40611 | overlap 1062067 TCCAGCGTAATAATA TCGCTACGCG GTA CGCCCAGCGA CTGCGCCACCCGCGC TERM 1411 1062194 - 1062160 - G 71 -4.9 -4.56597 | gap 1 TGCCGCCGGTAAAAA TCAGCC-TGGCTCCCG GATT CGCGCGCCACAGCCGA ATGCCTTCCGCCAGC smtA 1062668 - 1063471 + | putative metallothionein SmtA TERM 1412 1064342 - 1064313 - gf 74 -8.7 -3.87815 | CGTCACGTGCATAAA TTTATCCGTACCG CGAT CGATATGGATAAA AACCGTGTCTTCGCC TERM 1413 1064632 - 1064659 + GF 82 -11.3 -3.49568 | gap 1, opp_overlap 1064630, overlap 1064602 1064630 ATCTGGCGCAATACC CGCGCGCGCGTC ATTTC GACGTG-GCGCG TATTGTTATCGATCA mukF 1063464 - 1064786 + | condesin subunit F mukE 1064740 - 1065471 + | condesin subunit E TERM 1414 1066116 - 1066126 + F 74 -6.8 -4.20367 | AGCGCCATTACCCGA TCGC TAC GCGA TTATTTATTGCCGGA TERM 1415 1066887 - 1066864 - f 83 -4.4 -5.4505 | overlap 1066867 CGTTGGAACAAAAAA TGAGCGTGGC GCAA ACCGCGCACA GCCAGTTTGAGCAGG TERM 1416 1068339 - 1068318 - f 72 -8.7 -3.72893 | gap 1, opp_overlap 1068317, overlap 1068322 CATGGTCGCAGCAAA TGC-AGCGCG ACG CGCGCCAGCA GGCTTTTGCTCTGGC TERM 1417 1068334 - 1068322 - f 71 -10.5 -2.67803 | opp_overlap 1068317, overlap 1068318 GTCGCAGCAAATGCA GCGCG ACG CGCGC CAGCAGGCTTTTGCT TERM 1418 1068458 - 1068436 - f 79 -7.6 -4.42238 | overlap 1068437 CGATCTCAACGAAAA GCTGCGCCAG CGG CTGGAGCAGG CGGAAGCCGAGCGTA TERM 1419 1068457 - 1068437 - f 77 -11.1 -3.2486 | overlap 1068436 GATCTCAACGAAAAG CTGCGCCAG CGG CTGGAGCAG GCGGAAGCCGAGCGT TERM 1420 1068491 - 1068511 + F 80 -12.5 -3.07816 | CGCGCCCGCGAAGCG CTGCGCAGC CAT GCCGCGCAG TTAAGTCAGTACAGC TERM 1421 1069652 - 1069638 - f 73 -11.4 -2.6155 | overlap 1069637 GCTGGGAAGACGAAG CGCGCA GAC TGCGCG GGAAAGATATTTCGC TERM 1422 1070051 - 1070066 + F 100 -11.8 -5.42975 | TTATCATTAGCCTGG GGCGGC GAAA GCCGCC TTTTTCTTTATCTGA ycbB 1070284 - 1072131 + | hypothetical protein ycbK 1072391 - 1072939 + | hypothetical protein ycbL 1072967 - 1073614 + | hypothetical protein TERM 1423 1073644 - 1073628 - T 100 -12.3 -4.87893 | opp_overlap 1073628 AAGCGGAATGAAAAA GCCTGCA CAT TGCAGGC TTTTTTATCGGTCAC TERM 1424 1073628 - 1073644 + T 100 -12.3 -5.28176 | opp_overlap 1073628 AAGCGGAATGAAAAA GCCTGCA CAT TGCAGGC TTTTTTATCGGTCAC aspC 1074866 - 1073676 - | aromatic amino acid aminotransferase TERM 1425 1074383 - 1074344 - G 70 -9.2 -3.66556 | gap 1, opp_overlap 1074351 AACCGTGGAACAGAA CCACATCGCCGGCCTGTGC TTC GCTCAGGCTGGCT-TGTAG CGCTTCAAAATCCAG TERM 1426 1074351 - 1074377 + g 100 -15.8 -3.33261 | opp_overlap 1074344 GAACAGAACCACATC GCCGGCCTGTGC TTC GCTCAGGCTGGC TTGTAGCGCTTCAAA TERM 1427 1074451 - 1074463 + g 71 -4.8 -4.5442 | ACTTCCAGGCCGGCA GCGT TAAAC ACGC TTTTGTGGTTCGGCC TERM 1428 1074551 - 1074568 + g 71 -9.8 -3.55761 | overlap 1074552 1074554 CGGCAATGCGTAACG CGCCGG TACCGC CCGGCG TTTGCGCCGTGCGTG TERM 1429 1075018 - 1075003 - R 100 -9 -5.77988 | opp_overlap 1075003 AGAGAGATAAAAAAA CAGGAC CGAA GTCCTG TTTTTGAGGCATAAA TERM 1430 1075003 - 1075018 + r 89 -9 -4.58395 | opp_overlap 1075003 AGAGAGATAAAAAAA CAGGAC CGAA GTCCTG TTTTTGAGGCATAAA ompF 1076148 - 1075051 - | outer membrane protein 1a (IA;b;f), porin TERM 1431 1076593 - 1076603 + r 72 -2.6 -5.04597 | opp_overlap 1076578 1076577 1076593, overlap 1076578 TAATCCGCAATAAAA TTAA GGA TTAA TTTTTATGTGTAAAT TERM 1432 1076720 - 1076736 + r 86 -13.7 -3.16971 | opp_overlap 1076720 TCAGGCGGAAAAAAA GGCCAGC ATA GCTGGCC TTGAGTGTGTCGTAA TERM 1433 1076736 - 1076720 - R 100 -13.7 -5.42259 | opp_overlap 1076720 TCAGGCGGAAAAAAA GGCCAGC ATA GCTGGCC TTGAGTGTGTCGTAA asnC 1078155 - 1076755 - | asparaginyl-tRNA synthetase TERM 1434 1077265 - 1077251 - G 78 -7.1 -4.60797 | TCGGTAGAGACAAAA CGCTC CAGAC GAGCG ATAGCGTCTTTATCC TERM 1435 1077750 - 1077706 - G 70 -9.3 -3.67597 | CTGCTCATCGAAGAA GCGAT-GCAGCGCCTGCGCCA GAGTA TGGCGGACGCGC-GCTACCGC GCCAATCAGGTTGGT TERM 1436 1078316 - 1078297 - R 74 -5.7 -4.6526 | AGAAACCTGTAAAAA GTTCGCA CCTGCT CGCGAAC CATTGAGAATTTAGG SC0958 1078817 - 1078356 - | putative leucine response regulator TERM 1437 1078458 - 1078445 - G 79 -3.1 -5.13722 | CTGAGGAAAAGAAAA GCTCA CGGG TAAGC GCTTCATATTCCGCC TERM 1438 1080070 - 1080081 + G 77 -4.4 -4.88918 | GCCTATTATTCGGGA CAAC ACCA GTTG TTTTATTTCCGCTGA dpaL 1079231 - 1080331 + | diaminopropionate ammonia-lyase TERM 1439 1080411 - 1080395 - f 75 -2.9 -5.1101 | overlap 1080383 1080396 GCAGCATGTAAAAAA CGCGTTT TTT ATACGCA TAATAAACCTAATGC SC0960 1080423 - 1080581 + | hypothetical protein TERM 1440 1080631 - 1080642 + G 75 -5.8 -4.61353 | CTCTTTGAATTTCTA TGGG GTGG CCCA TTATTTTTGTGTGTC TERM 1441 1080786 - 1080768 - g 81 -2.4 -5.3472 | AAAAAATAAACAAAA CACTAC TGGCGAG GTAGCG TCTAAAAAATCTCTA lrp 1080595 - 1082031 + | Lrp family transcriptional regulator TERM 1442 1082097 - 1082071 - T 81 -12.3 -3.29471 | opp_overlap 1082075, overlap 1082075 TGGTCAGGAGAGTAA CAAAGCGCCCA CTTTC CGGGCGCTTCG TACAGGCATGGTTAA TERM 1443 1082093 - 1082075 - T 87 -9.5 -4.30177 | opp_overlap 1082075, overlap 1082071 CAGGAGAGTAACAAA GCGCCCA CTTTC CGGGCGC TTCGTACAGGCATGG pncB 1083359 - 1082109 - | nicotinate phosphoribosyltransferase intQ 1084794 - 1083517 - | Gifsy-2 prophage integrase TERM 1444 1084556 - 1084599 + g 73 -5.3 -4.60889 | overlap 1084564 1084593 1084594 AGCACAGTAATTTCC TTTCTATCCTGACCGAACC GGGCAA GGTTCGGTGAGTTTGGGAA TTTTTCCACATAGTT TERM 1445 1084564 - 1084591 + g 74 -9.9 -3.68853 | overlap 1084556 AATTTCCTTTCTATC CTGACCGAACC GGGCAA GGTTCGGTGAG TTTGGGAATTTTTCC TERM 1446 1084658 - 1084675 + g 82 -5.5 -5.07567 | opp_overlap 1084649 1084644 ACCGAAGAACGCAGT TCGCCAG CTAT CTTGCGA TTTTTTGCAGTGTCA TERM 1447 1084684 - 1084716 + g 73 -9.1 -3.89215 | overlap 1084685 CTTGCGATTTTTTGC AGTGTCAGGGATACC AAG GTTTTCCCTGACACG TTTACCTTTATACAG TERM 1448 1084685 - 1084715 + g 79 -12.6 -2.93047 | overlap 1084684 TTGCGATTTTTTGCA GTGTCAGGGATACC AAG GTTTTCCCTGACAC GTTTACCTTTATACA SC0964 1085368 - 1085129 - | putative cytoplasmic protein TERM 1449 1085389 - 1085373 - R 70 -5.1 -4.40572 | ATAAGGCGCATAAAA CCTCC TCAGGCG GGAGG GCGTAACCCCTCCCG recT 1086568 - 1085411 - | Gifsy-2 prophage RecT TERM 1450 1087798 - 1087830 + r 82 -11.9 -3.45032 | overlap 1087820 1087821 TGGTACACCTTCATA GCGGCCCGGCTCGAA GTA TTCCGGCCAGGCTGC TTCTGGCTCTTCTTG SC0966 1088206 - 1087793 - | exodeoxyribonuclease VIII TERM 1451 1089560 - 1089577 + r 93 -10.5 -4.72497 | GGACCGGACAGGGCA CGCCCGC TTCG GTGGGCG TTTTCTTAATGGATG SC0967 1089933 - 1089583 - | Gifsy-1 prophage protein SC0968 1090113 - 1089955 - | Gifsy-1 prophage protein TERM 1452 1089997 - 1090009 + g 74 -3.4 -4.86731 | TTCAGCGCACTGCCT GGAA CAATA TTCC TTTTCTTTGCGCGCC SC0969 1090222 - 1090106 - | Gifsy-1 prophage protein SC0970 1090512 - 1090718 + | hypothetical protein TERM 1453 1090740 - 1090723 - T 100 -9.8 -5.4756 | AAGGGCAATAAAAAA CCCGGC GCGAAG GCCGGG AGTCAAAACTTTACT SC0971 1091683 - 1090751 - | hypothetical protein TERM 1454 1091481 - 1091469 - G 70 -6.9 -4.07675 | overlap 1091465 1091464 CCAAAATCAACCAAA GCCCC TCT GAGGC GCAACTCCATGAAGT SC0972 1092153 - 1091680 - | hypothetical protein TERM 1455 1092259 - 1092238 - R 80 -7.3 -4.56775 | ATGCGTCGTGAAAAA TGTGCCTTA CTTG TTAGGCACA CGATAATAAATTTAC SC0973 1092771 - 1092304 - | putative regulator TERM 1456 1092902 - 1092883 - H 82 -7.8 -4.66833 | TTCCAACTGGAAAAA GACCGGGA TTCC CCCCGATC ACATTCGTTCAGTTT SC0974 1092942 - 1093352 + | Gifsy-1 prophage cI TERM 1457 1093403 - 1093379 - f 72 -8.6 -3.81062 | gap 1, opp_overlap 1093379, overlap 1093374 1093372 ACCAAAAAGGCGAAA GCCGC-GGTGA GGGG TCACCAACGGC TTTCTGGTGGAATTA TERM 1458 1093861 - 1093822 - g 100 -2.8 -6.02914 | opp_overlap 1093824, overlap 1093823 1093824 1093836 1093842 1093843 GGTACAGAAAAAAAA CCTTACCTGGAAAAGGTA AATT TACCTGAATCAGGTAAGA AAAGTTTACCCGAAT TERM 1459 1093884 - 1093842 - g 74 -8.6 -3.92659 | overlap 1093836 1093823 1093822 1093843 1093865 CCTGGAAAAGGTAAA TTTACCTGAATCAGGTAA GAAAAGT TTACCCGAATCAGGTAAC GGCTATTACCCAAAT TERM 1460 1093883 - 1093843 - g 75 -12.1 -2.95113 | overlap 1093836 1093823 1093822 1093842 1093865 CTGGAAAAGGTAAAT TTACCTGAATCAGGTAA GAAAAGT TTACCCGAATCAGGTAA CGGCTATTACCCAAA TERM 1461 1093908 - 1093865 - g 100 -11.2 -4.69656 | overlap 1093843 1093842 AATCAGGTAAGAAAA GTTTACCCGAATCAGGTAAC GGCT ATTACCCAAATCAGGTAAAC ACAAAAGACACTATT SC0975 1093444 - 1094280 + | putative replication protein O of prophage CP-933X SC0976 1094277 - 1094972 + | putative replication protein O of prophage CP-933X SC0977 1094986 - 1095783 + | hypothetical protein TERM 1462 1095799 - 1095818 + F 71 -10 -3.27022 | TGTCCCGTATCTACA TGCCGGTC CTGT GATCGGCA TTAGTGTAAAATCAA TERM 1463 1096164 - 1096177 + F 93 -9.5 -4.62336 | opp_overlap 1096164 AGTGTTGCGTCATAA CCCGC TGCG GCGGG TTTTTCGCCTAAAAT TERM 1464 1096177 - 1096164 - f 71 -9.5 -3.28791 | opp_overlap 1096164 AGTGTTGCGTCATAA CCCGC TGCG GCGGG TTTTTCGCCTAAAAT dinI 1096303 - 1096542 + | Gifsy-1 prophage DinI TERM 1465 1096587 - 1096577 - f 72 -5.4 -4.55295 | opp_overlap 1096582 GTTTCCAGAAATAAA GTCA GTG TGAC GGGGGGTTACATGTT TERM 1466 1096699 - 1096725 + F 78 -6.6 -4.68103 | TAGCGGACGCGCTCT GATGTATCGTCG TGG TGACGAGATATC TTTTGTTCCCCTTCA SC0979 1096877 - 1097479 + | Gifsy-2 prophage protein SC0980 1097485 - 1097685 + | hypothetical protein TERM 1467 1097892 - 1097877 - g 78 -6 -4.72201 | overlap 1097878 GCTGAGAAAAAAGAA CGCGCC ACCT GGCGCC AGCGGAAAGCCCCGG TERM 1468 1097891 - 1097878 - g 70 -9.5 -3.42236 | overlap 1097877 CTGAGAAAAAAGAAC GCGCC ACCT GGCGC CAGCGGAAAGCCCCG ninG 1097688 - 1098299 + | Gifsy-1 prophage protein TERM 1469 1098295 - 1098284 - f 70 -2.2 -5.00616 | gap 1 GCGTGCGCTAAAAAA GCTGG AGG CC-GC ATGAAACCAGAACTG SC0982 1098296 - 1098436 + | Gifsy-1 prophage protein regQ 1098433 - 1099113 + | Gifsy-1 prophage RegQ TERM 1470 1099190 - 1099213 + T 100 -13.1 -4.39571 | opp_overlap 1099185 1099190 ACCAAACAAATTCAA GCCCTGCGG ATAACA CCGCGGGGC TTTTGCGTTTCTGGA TERM 1471 1099213 - 1099190 - T 79 -10.9 -3.4241 | opp_overlap 1099190, overlap 1099185 ACCAAACAAATTCAA GCCCTGCGG ATAACA CCGCGGGGC TTTTGCGTTTCTGGA gtgA 1099920 - 1099234 - | Gifsy-2 prophage GtgA SC0985 1100190 - 1100525 + | Gifsy-1 prophage protein lycV 1100512 - 1100961 + | Gifsy-2 prophage lysozyme rzpD 1100979 - 1101458 + | Gifsy-2 prophage RzpD SC0988 1101615 - 1102040 + | Gifsy-2 prophage protein SC0989 1102810 - 1102673 - | hypothetical protein TERM 1472 1104098 - 1104110 + H 71 -10.5 -2.70932 | opp_overlap 1104077 AGAAAAAAATTTTAC CCGCC TGG GGCGG TGGTTCCGGAGGAGG SC0990 1104132 - 1104338 + | hypothetical protein TERM 1473 1105052 - 1105029 - g 81 -14.6 -2.65354 | gap 1, opp_overlap 1105030, overlap 1105026 1105025 TGCATCTTAAATTCA CCCGTCGCCTG AAT CAGGCG-CGGG GCGTCACGCTGCTGG TERM 1474 1105124 - 1105143 + G 70 -7.1 -4.2243 | gap 1, overlap 1105138 GACAGTGAAAGGCTG GCCGCGCG TATTT CG-GCGGC TTTTGCCATGTTTAT vmtV 1104335 - 1105864 + | Gifsy-2 prophage VmtV SC0992 1105910 - 1106308 + | Gifsy-2 prophage minor tail protein SC0993 1106383 - 1106634 + | Gifsy-2 prophage minor tail protein TERM 1475 1108579 - 1108551 - g 74 -2.4 -5.1101 | gap 1, opp_overlap 1108551 CCACGACCGAAAAAA TGACGGAAGC-GC ATAA GCAGCTTTTGTCA TTTCAGCAGCGCATC SC0994 1106648 - 1109701 + | Gifsy-2 prophage minor tail protein vmtM 1109698 - 1110030 + | Gifsy-2 prophage minor tail protein ail 1110129 - 1110626 + | Gifsy-2 prophage attachment and invasion protein-like protein TERM 1476 1110679 - 1110696 + T 100 -8.4 -5.28176 | opp_overlap 1110678 CGATACAGATTTAAT GCCCTC CAGTGA GAGGGC TTTTTTATGGGTAAA sodC 1111276 - 1110743 - | Gifsy-2 prophage superoxide dismutase precursor (Cu-Zn) TERM 1477 1111421 - 1111408 - g 71 -8.1 -3.82218 | opp_overlap 1111400 1111417 AGCGAGACCACCAAA GCGGA GCAG TCCGC GAAGGTGGATTTGTG TERM 1478 1111990 - 1111978 - g 77 -7.7 -4.2687 | CCGAAAAAGGATAAA TGCAG CCA CTGCA TGAAAGGCTGTGAAA TERM 1479 1112016 - 1112031 + G 70 -3.2 -4.75174 | overlap 1112007 TGAAATGCGTAACAA TCTGGT GAAT GCCGGA TTTTTCGCTTCCATC vmtL 1111366 - 1112061 + | Gifsy-2 prophage minor tail protein vtaK 1112071 - 1112808 + | Gifsy-2 prophage tail assembly protein TERM 1480 1113161 - 1113151 - gf 71 -6.8 -4.18494 | overlap 1113153 CACCTGTACCCAAAA CACC GAC GGTG GGTCAGACAGATAAC vtaI 1112745 - 1113410 + | Gifsy-2 prophage tail assembly protein TERM 1481 1113442 - 1113456 + F 91 -8.5 -5.05116 | opp_overlap 1113442 1113439 1113437 AGCTGATACACATGA CCGCC ATTAC GGCGG TTTTGTTATTTATGG TERM 1482 1115268 - 1115256 - f 71 -7.7 -3.90048 | CGTTCCGGAAAAAGA GTCCA TCG TGGAC AACGGGGCGCACTTT TERM 1483 1116574 - 1116560 - f 79 -8.6 -4.26589 | ATCAGATAGGGAAAA CCATCA CGG TGATGG CTAACTGTGAGCGTA TERM 1484 1116898 - 1116918 + G 100 -9 -5.09259 | gap 1, overlap 1116892 1116899 GCGTAATTTCTCTGG CGG-CAGGG CTTT CCCTGTCCG TTTTATTTTCCACTG SC1001 1116870 - 1117112 + | hypothetical protein TERM 1485 1117131 - 1117148 + F 100 -10.5 -5.24129 | GTGAATGAATCTGAA GCCTGCC TGCG GGCGGGC TTTTTTATGGAGGCA TERM 1486 1117557 - 1117502 - g 89 -13.8 -3.62597 | GCGATGGTGGAAGAA GTTGCCCGCCAGGCATCGGAGGCATC GCGG AATGCCACCGCCGCAGGGCAGGCATC TGAACAGGCGCAGAC TERM 1487 1117728 - 1117703 - g 73 -5.9 -4.4648 | ACGGCGACCACAAAA GCCGGGGAGGC ATCA GCCAGCGCGGC GTCGGCTGACACAGC TERM 1488 1117775 - 1117749 - g 95 -15 -3.41125 | overlap 1117742 CTGACACAGCCAGAA CGGCGGCAGCCG CAT CGGCAGCCGCAG CGAAAACATCTGAAG TERM 1489 1118005 - 1117981 - g 95 -12.7 -4.08767 | overlap 1117982 GGCAGCGTCGGAAAA GGCGGCAGCCG CAT CGGCAGCCGCA GCGAAAACATCTGAG TERM 1490 1118004 - 1117982 - g 100 -16.2 -3.05046 | overlap 1117981 GCAGCGTCGGAAAAG GCGGCAGCCG CAT CGGCAGCCGC AGCGAAAACATCTGA stf 1117166 - 1119604 + | Gifsy-2 prophage tail fiber protein TERM 1491 1119991 - 1119958 - g 77 -8.3 -4.08064 | gap 2, overlap 1119965 1119976 AAGGTCTGGGTAAAA GACGAAGC-G-GCTG AAAAAG CAGCGCAGCTTCGTC AGGCGGAAGAAACCA ycdD 1119604 - 1120185 + | Gifsy-2 prophage tail fiber assembly like-protein sseI 1120768 - 1121628 + | Gifsy-2 prophage putative type III secreted protein TERM 1492 1121711 - 1121691 - f 84 -7.5 -4.82128 | overlap 1121692 TCAGGAAAGAGAAAA GCCAGTCGC TGT ACGACTGGA TACAGGCGCAGTTGA TERM 1493 1121710 - 1121692 - f 82 -11 -3.48193 | overlap 1121691 CAGGAAAGAGAAAAG CCAGTCGC TGT ACGACTGG ATACAGGCGCAGTTG SC1005 1121821 - 1122069 + | ISSfl3 orfC,D yedK 1122827 - 1122201 - | hypothetical protein SC1007 1122803 - 1122958 + | hypothetical protein TERM 1494 1123082 - 1123067 - TR 100 -6.8 -5.96219 | opp_overlap 1123067 1123066 GAGCCATAAAAAAAA CAGCCC TGAC AGGCTG GTTTTTAAGGGGAAT SC1008 1123866 - 1123180 - | Gifsy-2 prophage protein msgA 1124402 - 1124136 - | Gifsy-2 prophage MsgA pepN 1124622 - 1127366 + | aminopeptidase N TERM 1495 1127394 - 1127422 + F 100 -9.6 -5.40072 | gap 1, opp_overlap 1127392 1127394, overlap 1127396 TAAAGAGGTAAGACA TGCCCGGTAAGCG TTAG CGCT-GCCGGGTA TTTTTTTGCCGGACG TERM 1496 1127396 - 1127420 + F 87 -10 -4.34482 | gap 1, opp_overlap 1127394 1127392, overlap 1127394 AAGAGGTAAGACATG CCCGGTAAGCG TTAG CGCT-GCCGGG TATTTTTTTGCCGGA pyrD 1127574 - 1128584 + | dihydroorotate dehydrogenase 2 TERM 1497 1128603 - 1128632 + F 78 -5.7 -4.84918 | opp_overlap 1128603 TTACCCTTTATCAGA CAACCAGGGCT TTATTTCC GGCGCTGGTTG TTTTATATTTCTCCA TERM 1498 1128871 - 1128893 + G 86 -6.8 -4.99035 | CGTAAAATGCTTACG CCGGACGCGT TTT GCCCGACCGG TTTTTGTGTGGATGA ycbW 1128751 - 1129293 + | hypothetical protein ycbX 1130399 - 1129290 - | hypothetical protein ycbY 1130498 - 1132606 + | 23S rRNA m(2)G2445 methyltransferase TERM 1499 1133728 - 1133708 - f 79 -9.7 -3.6608 | overlap 1133694 ACCACGCTACTGAAA CTGATGCTG GGA CAGCTTCAG GCTGACAGCGGGCGC TERM 1500 1134388 - 1134403 + F 76 -4.6 -5.00616 | overlap 1134376 AGCGCTACAGGCGCA GGTTGC GGAT GCGGCC TTTTTTAGCCAACCC pqiA 1134541 - 1135794 + | paraquat-inducible protein A TERM 1501 1136937 - 1136919 - g 80 -8.8 -4.07568 | GCGCTTCGCTTAAAA CCGGTAAC CTG GTGACCGG GGCGCTGTATGTCGA TERM 1502 1137146 - 1137124 - g 71 -10.6 -3.25169 | opp_overlap 1137126, overlap 1137116 1137138 1137139 TGAACAAGCGACTAA TACGCTGTCT GAA AGCCAGCGTA CTATGCGTCGGCTGC pqiB 1135799 - 1137439 + | paraquat-inducible protein B TERM 1503 1137517 - 1137506 - g 78 -2.2 -5.18371 | GCGGAGAAAATAAAA GCTA TTAT CAGC TCCCGATAGCGCAAA ymbA 1137436 - 1137999 + | putative outer membrane protein TERM 1504 1138048 - 1138022 - f 70 -9.4 -3.30781 | opp_overlap 1138022 GTAATGTAAATTTAA CCGCTTCAGG TCGTGCG CCTGAGGCGG TTTTTTTATTTTTGA TERM 1505 1138022 - 1138048 + F 100 -12.3 -6.20267 | opp_overlap 1138022 GTAATGTAAATTTAA CCGCTTCAGGT CGTGC GCCTGAGGCGG TTTTTTTATTTTTGA TERM 1506 1138190 - 1138212 + F 71 -7.1 -4.16397 | overlap 1138183 1138189 AGGTATTCGTGTAGT GTGATTGCA CATTT TGTAATCAC TGTTTTCTTTTCCAC rmf 1138255 - 1138422 + | ribosome modulation factor (involved in dimerization of 70S ribosomes) TERM 1507 1138439 - 1138469 + T 79 -8.2 -4.29326 | opp_overlap 1138442 1138446, overlap 1138446 TCTGTCTCTTTAGAA AAAGAAACCTCCGC AGT GCGGAGGTTTCGCC TTTATTGGCTTTGCA TERM 1508 1138466 - 1138442 - T 100 -18.7 -4.82901 | opp_overlap 1138439 1138446, overlap 1138446 GTCTCTTTAGAAAAA GAAACCTCCGC AGT GCGGAGGTTTC GCCTTTATTGGCTTT TERM 1509 1138446 - 1138462 + T 100 -13.7 -3.76534 | opp_overlap 1138446 1138442, overlap 1138439 CTTTAGAAAAAGAAA CCTCCGC AGT GCGGAGG TTTCGCCTTTATTGG TERM 1510 1138462 - 1138446 - T 100 -13.7 -4.96501 | opp_overlap 1138439 1138446, overlap 1138442 CTTTAGAAAAAGAAA CCTCCGC AGT GCGGAGG TTTCGCCTTTATTGG fabA 1139040 - 1138522 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase lonH 1140869 - 1139109 - | hypothetical protein TERM 1511 1139949 - 1139976 + g 72 -12.1 -2.73364 | CGCTTCTGCGCCGCA GGTATCGCCTT CGCATA AAGGCGATGCC TCCTTAAACTGGCGG TERM 1512 1141030 - 1141013 - H 72 -2.7 -5.04385 | overlap 1141028 CAGATGGCTAAAAAA CTGATAT TCTG ATAACAG TTACACGGTAACGTT ycbG 1141055 - 1141507 + | hypothetical protein TERM 1513 1141568 - 1141535 - T 83 -14.1 -2.64616 | gap 1, opp_overlap 1141545, overlap 1141537 1141545 TTGTCACCCAGACCA GAGCAAAAAACCCCGC GAC GCGGGGTTTTTTA-TC AGACGGAAACTTAAG TERM 1514 1141567 - 1141537 - T 82 -13.4 -2.8655 | opp_overlap 1141545, overlap 1141535 1141545 GTCACCCAGACCAGA GCAAAAAACCCCGC GAC GCGGGGTTTTTTAT CAGACGGAAACTTAA TERM 1515 1141545 - 1141559 + T 100 -12.8 -5.24129 | opp_overlap 1141537 1141535 1141545 GACCAGAGCAAAAAA CCCCGC GAC GCGGGG TTTTTTATCAGACGG TERM 1516 1141559 - 1141545 - T 100 -12.8 -5.23316 | opp_overlap 1141545, overlap 1141537 1141535 GACCAGAGCAAAAAA CCCCGC GAC GCGGGG TTTTTTATCAGACGG ompA 1142631 - 1141579 - | outer membrane protein A sulA 1143497 - 1142988 - | SOS cell division inhibitor TERM 1517 1144291 - 1144254 - g 71 -10.6 -3.25823 | gap 2, overlap 1144255 GTCGGCGTACATGAA GCGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCGA CTGGGCTCATTCGAT TERM 1518 1144290 - 1144255 - g 81 -14.1 -2.55351 | gap 2, overlap 1144254 TCGGCGTACATGAAG CGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCG ACTGGGCTCATTCGA yccR 1143714 - 1144319 + | hypothetical protein yccS 1146459 - 1144306 - | efflux (PET) family transporter TERM 1519 1144887 - 1144876 - G 73 -5.8 -4.41348 | GTCTGGCCAAATAAA GCTG ACCG CAGC CCAGGCGATAGCGCA TERM 1520 1145108 - 1145097 - G 75 -5.8 -4.67256 | overlap 1145098 GAACAAACCATAAAA TCGG CAGG CCGA TAGCAACGCCTACCA TERM 1521 1145504 - 1145492 - G 83 -10.5 -3.9281 | AGCAGCTCTAAAGAA GCGCC GCT GGCGC GCATACGTTCAAGCG TERM 1522 1146519 - 1146488 - R 72 -6.5 -4.21194 | gap 1, opp_overlap 1146489 1146504, overlap 1146489 CCCGATCATTCAAAA CGGCGGCGCGCG TTAGCTTCT CGCGCGGCGC-G AGCGGTTTCTACAGA yccF 1146924 - 1146478 - | hypothetical protein TERM 1523 1146504 - 1146524 + g 73 -8.9 -3.85698 | opp_overlap 1146488 1146489 GGCGGCGCGCGTTAG CTTCTCGCG CGG CGCGAGCGG TTTCTACAGAGACGA TERM 1524 1148025 - 1148005 - g 78 -2.3 -5.28176 | overlap 1148006 TGTAGCGAGAAAAAA GCGCAGGCC AAA GGCTGGCGT CAGTGGCTGGAAGAG TERM 1525 1148940 - 1148954 + G 77 -8.6 -4.08216 | GGAAAGTGCGCTTCT TCCTCA GGT TGAGGA TTTTCCGGACGCTGA TERM 1526 1148989 - 1149025 + G 76 -5 -4.72986 | gap 1, overlap 1148992 CGGCGTTTGTTATAT GTGGCGTTGACGCGCGC GCGT GCGCGGGTCTG-GCTGC TTTTTAATAAAGATA helD 1147048 - 1149102 + | DNA helicase IV TERM 1527 1149132 - 1149104 - T 88 -12.3 -3.61764 | opp_overlap 1149100 1149127, overlap 1149096 1149105 CGAGGAAGCCCTAAA GCGCGGGCGGTAC AGC ATCCCGCCCGCGT AGCGGTTATTTCAGG TERM 1528 1149131 - 1149105 - T 93 -15.8 -2.76737 | opp_overlap 1149100 1149127, overlap 1149096 1149104 GAGGAAGCCCTAAAG CGCGGGCGGTAC AGC ATCCCGCCCGCG TAGCGGTTATTTCAG TERM 1529 1149127 - 1149137 + T 74 -8.2 -3.9122 | opp_overlap 1149105 1149104, overlap 1149100 GGTACAGCATCCCGC CCGC GTA GCGG TTATTTCAGGCGCTC mgsA 1149596 - 1149138 - | methylglyoxal synthase yccT 1150353 - 1149691 - | hypothetical protein TERM 1530 1150017 - 1150002 - G 77 -8.2 -4.07568 | opp_overlap 1150008 CGTCGCCGTCCAAAA GCGCCA GACG CGGCGC CGCGTTAAAATGCGA yccU 1150524 - 1150940 + | hypothetical protein TERM 1531 1150980 - 1150943 - T 88 -8.5 -4.86731 | opp_overlap 1150951, overlap 1150944 GCTGGCGAAATAAAA GTTTAAATGGCCGGATA TCGC TTTCCGGCCTTTTAAAT ACAATCAGTTACGTA TERM 1532 1150979 - 1150944 - T 86 -12 -3.51557 | opp_overlap 1150951, overlap 1150943 CTGGCGAAATAAAAG TTTAAATGGCCGGATA TCGC TTTCCGGCCTTTTAAA TACAATCAGTTACGT TERM 1533 1150951 - 1150972 + T 83 -10.1 -4.1899 | opp_overlap 1150944 1150943 AATAAAAGTTTAAAT GGCCGGATA TCGC TTTCCGGCC TTTTAAATACAATCA yccV 1151302 - 1150985 - | hypothetical protein yccW 1152727 - 1151360 - | hypothetical protein ybcL 1152786 - 1153334 + | putative outer membrane protein TERM 1534 1153993 - 1154011 + G 71 -8.1 -3.89524 | opp_overlap 1153992 CAAATTGTTGAAGAG GTGCGCA TGTCC TGCGCGC TTTCTCAACTGCAAT ybcM 1153360 - 1154139 + | AraC family transcription regulator yccX 1154188 - 1154469 + | putative phosphohydrolase yccK 1154795 - 1154466 - | sulfurtransferase TusE TERM 1535 1154530 - 1154561 + g 77 -3.6 -5.06414 | TTTGCCGGGCCTTTC GGGAACAGACGATG TAGA TAGCGGCTGTTGCC TTTTTCTTCGCCGAA TERM 1536 1154866 - 1154841 - R 91 -7.5 -5.15634 | overlap 1154845 CAGTGTAGCAAAAAA TAAAGCCCTGC ATAA GCAGGGCTGGA AGAGGGGAATGTCGA TERM 1537 1154862 - 1154845 - R 100 -12.7 -5.0917 | overlap 1154841 GTAGCAAAAAATAAA GCCCTGC ATAA GCAGGGC TGGAAGAGGGGAATG yccA 1155541 - 1154882 - | hypothetical protein TERM 1538 1156034 - 1156055 + r 100 -12.3 -5.04249 | opp_overlap 1156034 CGCCAGATTAAACAA GGGGTTACC GAAA GGTAGCCCC TTTGTTTTTTGGGCG TERM 1539 1156055 - 1156034 - R 83 -10.1 -4.04806 | opp_overlap 1156034 CGCCAGATTAAACAA GGGGTTACC GAAA GGTAGCCCC TTTGTTTTTTGGGCG pipA 1156840 - 1156160 - | pathogenicity island encoded protein: SPI3 pipB 1157937 - 1157062 - | pathogenicity island encoded protein: SPI3 TERM 1540 1158328 - 1158316 - g 71 -4.8 -4.59109 | TAGATGGCGTAAAAA CCTG ATGAG CAGG AATACTTACACACTA TERM 1541 1158366 - 1158348 - g 72 -2.4 -4.84527 | CTTACACACTAAAAA TGCTCC CGCAAAC AGAGCA AAATGAGAGAGATGA SC1041 1158149 - 1158475 + | putative inner membrane protein pipC 1158826 - 1158485 - | hypothetical protein TERM 1542 1158607 - 1158635 + g 72 -11.7 -2.71731 | opp_overlap 1158584, overlap 1158609 AAGCAGTATTGTCTG CGTCAGCGCCG ATAGTGA CGGCGCTGGTG TAGTTCAGACGTAAA sopB 1160528 - 1158843 - | outer protein pipD 1161624 - 1160620 - | pathogenicity island encoded protein: SPI3 TERM 1543 1161136 - 1161146 + g 72 -2.4 -4.85599 | CTCAATGGCGTCTTC CGTG ATT CCCG TTTTTGTCACGTAAG copS 1163068 - 1161704 - | copper resistance; histidine kinase copR 1163741 - 1163061 - | transcriptional regulatory protein YedW TERM 1544 1164004 - 1163994 - g 71 -8.2 -3.82208 | overlap 1163986 CAGCAAACAGGCAAA CCGG CGC CCGG CGTGGAGGTGGTACT yedX 1163877 - 1164287 + | hypothetical protein TERM 1545 1164545 - 1164513 - T 73 -11.4 -2.50443 | gap 1, overlap 1164512 TTAGATTGTATTAAT CGCCGCGATTTATTG CGAG CAA-ACATCGCGGCG GGAATAAAAATCTTC hpaC 1165132 - 1164620 - | 4-hydroxyphenylacetate catabolism hpaB 1166712 - 1165150 - | 4-hydroxyphenylacetate catabolism TERM 1546 1166431 - 1166447 + g 91 -12.3 -4.07568 | AGCATCACGCTGTTG GCGCAGA TCG TCTGCGC TTTTCGCCACGCGGA TERM 1547 1166634 - 1166648 + g 70 -3.4 -4.70266 | AAATATAAATTTCCC GCCCGT CCT GCAGGC TTTTTAAATACTCTT hpaR 1167370 - 1166930 - | 4-hydroxyphenylacetate catabolism TERM 1548 1166987 - 1167006 + g 76 -2.9 -5.02074 | gap 1, overlap 1166990 AATAAGATCGTCCAG CAGCAGCA TCAAT TGCTG-TG TTTTTTCGGGCGTGA TERM 1549 1167970 - 1167946 - g 72 -11.5 -3.06696 | overlap 1167969 GCCTGCCGGAAGAGA GCTTTTATCGC CCG GCGATTAAAGC GAAATGTCGCGATGG TERM 1550 1168631 - 1168621 - g 87 -8.2 -4.56775 | opp_overlap 1168625 1168628 ATCTGCGGGTAAAAA GCCG CGA CGGC CTGACGCCGATAGGC hpaG 1167645 - 1168934 + | 4-hydroxyphenylacetate catabolism TERM 1551 1169240 - 1169224 - g 72 -3.5 -4.82667 | opp_overlap 1169237 TCACCAGACTAAAAA CGTGCTG ATC CCGCGCG CCTCGCATAACTTCG hpaE 1168931 - 1170397 + | 4-hydroxyphenylacetate catabolism hpaD 1170399 - 1171250 + | 4-hydroxyphenylacetate catabolism hpaF 1171260 - 1171640 + | 4-hydroxyphenylacetate catabolism TERM 1552 1171745 - 1171700 - f 71 -9.8 -3.21806 | gap 2, overlap 1171693 1171695 CGAAGCAATACCGAA CCG-TAGGCCGGGTAA-GACGC ACCC GCGTCGCTACCCGGCGCAGCAG CACCGAATGACGTAA TERM 1553 1171851 - 1171830 - g 71 -4.3 -4.60889 | overlap 1171817 1171832 AATCAGGCTGAAAAA CAGCGTGAA CAGA TTCGCGCAG TGTCGCTGGATTATC hpaH 1171773 - 1172576 + | 4-hydroxyphenylacetate catabolism TERM 1554 1172619 - 1172595 - g 72 -2.1 -4.88129 | overlap 1172588 1172596 1172617 AAAAACGATGAAAAA TGCTTTCAAAG ACA CGTTAAAAGCG GGGCGTCCGCAAATC hpaI 1172587 - 1173378 + | 4-hydroxyphenylacetate catabolism hpaX 1173450 - 1174826 + | 4-hydroxyphenylacetate catabolism TERM 1555 1174942 - 1174976 + G 86 -6.5 -5.0538 | gap 1, overlap 1174943 GTATGGCGGATTTCT TTGGTCGTGAT-ATGC AGGC GCATCGCCACGACCAG TTTTTTCAAATGCAC TERM 1556 1175063 - 1175089 + G 71 -4.2 -4.63932 | GGCGCCGCTATTTGT GCTTACGCCGCC CTC GGTGCCGCATGC TTTTATTACCGAATC hpaA 1174836 - 1175732 + | 4-hydroxyphenylacetate catabolism TERM 1557 1176306 - 1176326 + G 71 -6.2 -4.25104 | gap 1 TTCCCCTTTCCCGGA CGGTGAAGC GTTT GCTT-ACCG TTTTGATACCCAGGG TERM 1558 1176495 - 1176482 - g 72 -3.8 -4.74103 | TTGGCAACGGAAAAA CGCT GGCTGA AGCG ATTGCGTCGCATCAC ars 1175746 - 1176684 + | hypothetical protein TERM 1559 1176734 - 1176704 - T 84 -10.4 -3.94409 | opp_overlap 1176703 1176708 1176723, overlap 1176705 1176708 CAGAGCAGGGATAAA CCCACGGGCTGACA TGA TGTCAGCCCGTTAT GCTTTTGGCGATCAG TERM 1560 1176733 - 1176705 - T 85 -13.9 -2.96164 | opp_overlap 1176703 1176708 1176723, overlap 1176704 1176708 AGAGCAGGGATAAAC CCACGGGCTGACA TGA TGTCAGCCCGTTA TGCTTTTGGCGATCA TERM 1561 1176708 - 1176730 + T 100 -17.8 -3.68359 | opp_overlap 1176708 1176705 1176704, overlap 1176703 1176723 GCAGGGATAAACCCA CGGGCTGACA TGA TGTCAGCCCG TTATGCTTTTGGCGA TERM 1562 1176730 - 1176708 - T 100 -17.8 -2.71325 | opp_overlap 1176703 1176708 1176723, overlap 1176705 1176704 GCAGGGATAAACCCA CGGGCTGACA TGA TGTCAGCCCG TTATGCTTTTGGCGA elbA 1177454 - 1177092 - | hypothetical protein SC1061 1177902 - 1178057 + | hypothetical protein TERM 1563 1178088 - 1178059 - T 82 -11.4 -3.64703 | gap 1, opp_overlap 1178060, overlap 1178060 CCGGGTGCATGTAAA TCCG-GGGTGGGC AGAAA GCCCACCCTCGGT TTATTGCCTTTATCG TERM 1564 1178060 - 1178087 + T 100 -14.9 -4.30933 | gap 1, opp_overlap 1178059 1178060 CGGGTGCATGTAAAT CCG-GGGTGGGC AGAAA GCCCACCCTCGG TTTATTGCCTTTATC TERM 1565 1178087 - 1178060 - T 87 -14.9 -2.78679 | gap 1, opp_overlap 1178060, overlap 1178059 CGGGTGCATGTAAAT CCG-GGGTGGGC AGAAA GCCCACCCTCGG TTTATTGCCTTTATC yccD 1178413 - 1178108 - | chaperone-modulator protein CbpM cbpA 1179333 - 1178413 - | curved DNA-binding protein CbpA TERM 1566 1178924 - 1178942 + g 74 -7.4 -4.1552 | overlap 1178921 GAATAGCTAATCGTA CGCTGG TGCTCTT CCAGCG TTTCTTCCAGGAATA SC1064 1179569 - 1179931 + | suppression of copper sensitivity: putative copper binding protein TERM 1567 1180195 - 1180207 + F 72 -10.5 -2.89564 | CGCGCCGGGGGAAGG GGGCG TGG CGCCC TCTATCGCCTGGAAA TERM 1568 1180326 - 1180359 + F 70 -9.5 -3.11326 | gap 1 TGACCTTTCCGATGA TCGTGCGCGGTACGCC GCC GGCG-ACCTTGCGCGG TGTGTTGACGTTATC TERM 1569 1180786 - 1180762 - f 72 -10.7 -2.81768 | opp_overlap 1180784, overlap 1180761 1180764 1180785 GGAGAGCACGTAAAC CATTGGCGCTG CGC CAGCGCAAACG CCGGACAATGCGGCG TERM 1570 1180784 - 1180764 - f 70 -9.7 -2.95384 | overlap 1180762 1180761 AGAGCACGTAAACCA TTGGCGCTG CGC CAGCGCAAA CGCCGGACAATGCGG TERM 1571 1181106 - 1181117 + F 71 -3.6 -4.74103 | TGTTGTTTAGCGCCA GCCT GTTC GGGC TTTTTGAGTTCAGGC TERM 1572 1181261 - 1181306 + F 83 -10.3 -3.76125 | overlap 1181265 1181267 CTGGGCACGGCGGTC GCGGTGGCGCTCACGGCGTCG CTGC CGACGCTGTGGGGGCTGTTCC TTTCGCTTGGCCTGG TERM 1573 1181265 - 1181302 + F 93 -14.1 -3.57106 | overlap 1181261 1181267 GCACGGCGGTCGCGG TGGCGCTCACGGCGTCG CTGC CGACGCTGTGGGGGCTG TTCCTTTCGCTTGGC TERM 1574 1181267 - 1181300 + F 100 -16.7 -3.3568 | overlap 1181265 1181261 ACGGCGGTCGCGGTG GCGCTCACGGCGTCG CTGC CGACGCTGTGGGGGC TGTTCCTTTCGCTTG SC1065 1181863 - 1182486 + | hypothetical protein TERM 1575 1182476 - 1182463 - f 83 -4.5 -5.27335 | overlap 1182464 GTGGTGAAAGAAAAA CTGGC GGCT GCCAA TGGCGGGTAAACTGC TERM 1576 1182488 - 1182515 + G 77 -4.8 -4.84359 | gap 1 CCAATGGCGGGTAAA CTGCGGCGTTGGC TGC GTGAA-GCCGCGG TTTTTCTGGCGCTCC TERM 1577 1182779 - 1182745 - g 86 -10.6 -4.19238 | GGCTGAAGGGGAAAA CGTCATGACCGTTGCG CTC CGCTCCGGCGATGACG CTGAGGTTGCCCGCT SC1066 1182476 - 1182982 + | hypothetical protein TERM 1578 1183007 - 1182986 - f 82 -12.9 -3.03903 | opp_overlap 1182981 1182980 AAAACGTTCTGAATA TGCGCCGGG GTTT CCCGGCGCT AACGCGTTTACTGTA agp 1183115 - 1184356 + | glucose-1-phosphatase/inositol phosphatase TERM 1579 1184392 - 1184354 - T 76 -8.1 -4.09511 | gap 1, opp_overlap 1184350 1184358 1184362 1184363, overlap 1184357 AACACTGCTGCAAAA TAGC-CATATGCCCCCGC GCAA GCGGGGGCGTTTGTGTTA TACGTTTTTACGTTC TERM 1580 1184358 - 1184387 + T 100 -15.7 -3.34591 | opp_overlap 1184357 1184354, overlap 1184350 1184362 1184363 CTGCTGCAAAATAGC CATATGCCCCCGC GCAA GCGGGGGCGTTTG TGTTATACGTTTTTA TERM 1581 1184362 - 1184383 + T 100 -15.1 -4.28791 | opp_overlap 1184357 1184354, overlap 1184358 1184350 1184363 TGCAAAATAGCCATA TGCCCCCGC GCAA GCGGGGGCG TTTGTGTTATACGTT TERM 1582 1184363 - 1184382 + T 100 -16.4 -3.1619 | opp_overlap 1184357 1184354, overlap 1184362 1184358 1184350 GCAAAATAGCCATAT GCCCCCGC GCAA GCGGGGGC GTTTGTGTTATACGT yccJ 1184617 - 1184390 - | hypothetical protein wraB 1185117 - 1184638 - | trp-repressor binding protein SC1070 1185248 - 1185475 + | hypothetical protein SC1071 1185515 - 1185709 + | hypothetical protein TERM 1583 1185729 - 1185746 + F 100 -14.1 -6.02919 | CGTCATGCGCCACCG CCGCCGG ATTT CCGGCGG TTTTTTTGTTTATAA TERM 1584 1185884 - 1185863 - g 77 -8.1 -4.08767 | gap 1 GCCACCGGTGCAAAA CGGCAGCTTA TCT TAA-CTGCCG CGCTTGCTGTTTTTT TERM 1585 1186246 - 1186229 - g 74 -3.4 -4.84527 | gap 1 TTGATAGATGAAAAA TCCGCGC TGATT GC-CGGA TGGGTGCACAGCGGG ycdC 1185806 - 1186444 + | TetR/AcrR family transcriptional regulator SC1073 1186836 - 1186441 - | putative periplasmic protein TERM 1586 1186878 - 1186861 - R 93 -9.1 -4.7373 | opp_overlap 1186861 TGACGCGAGTAAAAA GGCTCCA TTGA CGGAGCC TTAATTAACCACAGT TERM 1587 1186918 - 1186940 + r 75 -9.8 -3.59979 | TTGTCATCAGGCTGG CATTACCGCC AGC GGCGGCAGTG TTTACGCTCAGCGAA putA 1190857 - 1186895 - | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1588 1190708 - 1190720 + g 74 -7.7 -4.1585 | overlap 1190705 CGCAGGTAGCTCCGG TAGCG TAT CGCTA TTTTCCAGCTTGTCC SC1075 1190918 - 1191049 + | hypothetical protein TERM 1589 1191392 - 1191410 + G 70 -6.6 -4.19371 | overlap 1191407 TGACTATATTCTTGG CGGTCGCA GCC TGGGGCCG TTTGTTACGGCTTTA putP 1191279 - 1192787 + | SSS family major sodium/proline symporter TERM 1590 1192823 - 1192792 - f 86 -14.6 -2.65808 | opp_overlap 1192792 1192794, overlap 1192789 1192788 AGGCGGAATAACCGA CATGTCCGATAGCA TTAT TGCCATCGGACATA TTTTACCAGGCGGCG TERM 1591 1192792 - 1192823 + F 87 -10.2 -4.07568 | opp_overlap 1192789 1192788 1192792, overlap 1192794 AGGCGGAATAACCGA CATGTCCGATAGCA TTAT TGCCATCGGACATA TTTTACCAGGCGGCG TERM 1592 1192794 - 1192821 + F 88 -12.8 -3.63744 | opp_overlap 1192792 1192789 1192788, overlap 1192792 GCGGAATAACCGACA TGTCCGATAGCA TTAT TGCCATCGGACA TATTTTACCAGGCGG TERM 1593 1192829 - 1192854 + F 90 -15.5 -2.66964 | gap 1, opp_overlap 1192824, overlap 1192826 ATCGGACATATTTTA CCAGGC-GGCGT TAT ACGCCTGCCTGG TCCTCTGATAAGTCC TERM 1594 1193593 - 1193578 - f 74 -5.4 -4.56597 | overlap 1193587 GCGTCGTTTCAAAAA GCAAGC TAAG GCTTAC AAGGAAGCCAACCCT TERM 1595 1194426 - 1194436 + G 71 -8.2 -3.85698 | CAAAGACGACTGCGT GCGC TCG GCGC TTTGTCAGCGAACGC phoH 1193614 - 1194468 + | hypothetical protein TERM 1596 1194484 - 1194507 + T 95 -14.6 -3.58905 | opp_overlap 1194476, overlap 1194488 TATAGCATTGACTTT CAGAGCCCGG GAGA CCGGGCTTTG TTGTCTATAAAGCGT TERM 1597 1194488 - 1194503 + T 100 -11.8 -4.42974 | opp_overlap 1194476, overlap 1194484 GCATTGACTTTCAGA GCCCGG GAGA CCGGGC TTTGTTGTCTATAAA hthR 1195455 - 1194574 - | putative transcriptional regulator TERM 1598 1197399 - 1197378 - R 79 -8.7 -4.24948 | TCATGAGATGTAAAA GGCAGAGCA TTTA TGCTCCACC AATGGTGATGCCCAG SC1079 1198253 - 1197573 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 1599 1197791 - 1197754 - G 77 -11.3 -3.58343 | opp_overlap 1197752 GTCACCATTGCCAAA TCTGGCTCAACCGGC GTGATGGG GCCGGTATAGCCAGA CAGTGTTGTACCAAT TERM 1600 1198185 - 1198212 + g 71 -6.3 -4.35518 | gap 1 AGGGCTGCCTGGTAC CGGTTGGCATGA GACAA TCA-GCCCACCG TTTTCGTGTACACTT TERM 1601 1199094 - 1199082 - g 100 -5.5 -5.81412 | CGTAGGGAAAAAAAA CAGTG AAT CACCG TTGCAGGTTTATAGC TERM 1602 1199885 - 1199903 + G 71 -6.1 -4.25056 | CGTCTGTAACCTCCT TTACCAT GCGTG ATGGTAA TTTATTAATAAAATA yjhT 1198759 - 1199919 + | hypothetical protein yiiy 1199965 - 1200657 + | putative outer membrane protein TERM 1603 1204384 - 1204371 - g 81 -2.4 -5.41746 | overlap 1204375 AAGCGGGCAAAAAAA CACA CTTTCT TGTG CATGAAAGCCAGGCG yjhC 1203569 - 1204675 + | putative dehydrogenase and related proteins TERM 1604 1204813 - 1204794 - f 100 -10 -5.47399 | TTAATGCGAAAAAAA GCCCGTAC TTCT GTACAGGC TCTCAACTTAAATAT ycdW 1205151 - 1206089 + | paral putative oxidoreductase TERM 1605 1206096 - 1206111 + F 86 -11.8 -3.64703 | opp_overlap 1206096, overlap 1206110 GGATATTGATATCAA CCCGGC GCGG GCCGGG TTTCGCTAAAAAACG TERM 1606 1206111 - 1206096 - f 79 -11.8 -3.28912 | opp_overlap 1206096 1206110 GGATATTGATATCAA CCCGGC GCGG GCCGGG TTTCGCTAAAAAACG TERM 1607 1206777 - 1206811 + G 80 -8.7 -4.08216 | gap 1, opp_overlap 1206786 TTTACGCTTGGCGAT TTCACCGAATGCCGGA AAAT TCTGG-ATGCGGTGAA TTTTCCGGAAGATCG ycdX 1206174 - 1206911 + | putative hydrolase ycdY 1206935 - 1207489 + | hypothetical protein TERM 1608 1207880 - 1207890 + G 70 -3.2 -4.77173 | GTGTATCCAGGCAAA GCAG CTA TTGC TTTCTTTTGTCCCGG ycdZ 1207542 - 1208072 + | hypothetical protein TERM 1609 1208096 - 1208076 - T 100 -14 -5.54907 | opp_overlap 1208076 GTCACAAAATAAAAA GCGTGGGG TTCTT CCCCACGC TTTGTCGTATTCATC TERM 1610 1208076 - 1208096 + T 100 -14 -4.07455 | opp_overlap 1208076 GTCACAAAATAAAAA GCGTGGGG TTCTT CCCCACGC TTTGTCGTATTCATC csgG 1208943 - 1208110 - | putative transcriptional regulator in curly assembly/transport, 2nd curli operon csgF 1209386 - 1208970 - | curli assembly protein CsgF csgE 1209808 - 1209413 - | curli assembly protein CsgE csgD 1210463 - 1209813 - | DNA-binding transcriptional regulator CsgD TERM 1611 1210206 - 1210227 + g 73 -5.3 -4.62471 | opp_overlap 1210206 GTCAGGGGTATTTAA CAATAATGT TTTT ATATTATTG TTTTTGCGGCTTAAA TERM 1612 1210602 - 1210589 - H 73 -2.5 -5.24799 | opp_overlap 1210589 CCAGAAAGAGAAAAA TATTT ACGA AAATA CTTTTAACTGTTTTC TERM 1613 1210788 - 1210800 + H 72 -4.9 -4.60317 | ATTATAATAATTCAT TGATT TTT AATCA TTTTAATTATTGTGT csgB 1211218 - 1211673 + | curlin minor subunit csgA 1211715 - 1212170 + | cryptic curlin major subunit TERM 1614 1212196 - 1212211 + F 100 -10.4 -5.75342 | opp_overlap 1212196 GCGCTAATAAAAAAA CAGGGC ATAA GCCCTG TTTTTTTTCGGGAGG TERM 1615 1212211 - 1212196 - f 100 -10.4 -5.7946 | opp_overlap 1212196 GCGCTAATAAAAAAA CAGGGC ATAA GCCCTG TTTTTTTTCGGGAGG csgC 1212244 - 1212558 + | putative autoagglutination protein ymdA 1212689 - 1213009 + | hypothetical protein TERM 1616 1213625 - 1213611 - g 77 -7.8 -4.36914 | CCCTGCCTGATAAAA CACGCC TGG AGCGTG CCGTTGAACCGCTAT TERM 1617 1214984 - 1214954 - g 83 -8.2 -4.42464 | opp_overlap 1214957 AAGGTGTTAAAGAAA GAACCCGCTACGCG TTT CTGGCAGCGAGTTC TGGTACGGTTGGCGG ymdC 1213442 - 1215028 + | hypothetical protein mdoC 1216199 - 1215045 - | glucans biosynthesis protein mdoG 1216480 - 1218006 + | glucan biosynthesis protein G TERM 1618 1218106 - 1218069 - gf 77 -8.6 -4.09685 | gap 3, opp_overlap 1218101, overlap 1218073 CGGCATTGCCGAAAA CT-GACATCC-GCGCCGTG CAT CA-GGCGCTGGATGCCGAG CATCGGACTTACTCG TERM 1619 1218101 - 1218073 - gf 71 -10.4 -2.74784 | overlap 1218069 ATTGCCGAAAACTGA CATCC-GCGCCGTG CAT CA-GGCGCTGGATG CCGAGCATCGGACTT TERM 1620 1218411 - 1218386 - gf 72 -3.9 -4.7497 | opp_overlap 1218397, overlap 1218387 GCGAGCGAGCAAAAA TGGCGTACCGT CGGC ACTATACGCCG CTATATTTTGTTAAT TERM 1621 1218997 - 1218972 - gf 75 -6.1 -4.37711 | opp_overlap 1218973 GTATGAAACGCAAAA GCGGCAATATT GACG ATTTTTGCCGC CGCTGGGGCAATCAG mdoH 1217969 - 1220542 + | glucosyltransferase MdoH TERM 1622 1220572 - 1220590 + F 100 -11 -4.91511 | opp_overlap 1220572 GAGTGAGGTGAAAAA TACCGGCG TGA TGCCGGTA TTTTTATAGTGAAAT TERM 1623 1220590 - 1220572 - f 93 -10.3 -4.62783 | opp_overlap 1220572 GAGTGAGGTGAAAAA TACCGGC GTGAT GCCGGTA TTTTTATAGTGAAAT yceK 1220604 - 1220843 + | hypothetical protein msyB 1221218 - 1220844 - | hypothetical protein yceE 1222514 - 1221300 - | drug efflux system protein MdtG TERM 1624 1222644 - 1222663 + r 78 -12.2 -2.64616 | opp_overlap 1222644 AAAAGAGGGGAAAAA TTGCAGCC TGAC GGCTGCAA TCCTGTCAATAGCGC TERM 1625 1222663 - 1222644 - R 100 -12.2 -4.69464 | opp_overlap 1222644 AAAAGAGGGGAAAAA TTGCAGCC TGAC GGCTGCAA TCCTGTCAATAGCGC htrB 1223589 - 1222669 - | lipid A biosynthesis lauroyl acyltransferase yceA 1223809 - 1224861 + | hypothetical protein TERM 1626 1224903 - 1224864 - T 79 -12.1 -3.13403 | opp_overlap 1224867, overlap 1224862 1224886 TCCGGCTGAGTAATA TTTTGCCGGATAGCGGC GTAAAG GCCGCTATCCGGCATTT CGCCAGGCGTTACTT TERM 1627 1224867 - 1224900 + T 100 -22.6 -3.53761 | opp_overlap 1224864 1224862 1224886 GGCTGAGTAATATTT TGCCGGATAGCGGC GTAAAG GCCGCTATCCGGCA TTTCGCCAGGCGTTA yceI 1225488 - 1224913 - | hypothetical protein SC1105 1226057 - 1225485 - | putative inner membrane protein SC1106 1226068 - 1226271 + | hypothetical protein yceO 1226433 - 1226320 - | putative inner membrane protein TERM 1628 1226468 - 1226450 - R 83 -9.5 -4.1822 | GCTTACCTTAATAAA CAGCCCC TTTAC GGGGCCG ACAAATTATTGGCTA TERM 1629 1226504 - 1226494 - R 72 -8.2 -3.76413 | GGCTAAAACGGGAAA GCCG GAA CGGC GTCAGATCAAAGGAG solA 1227592 - 1226474 - | N-methyltryptophan oxidase TERM 1630 1226710 - 1226694 - G 71 -7.9 -3.96216 | opp_overlap 1226694 GCCCCATGTAAACAA CCGCCGA TAC CCGGCAG TACGTTACGCAGGAA TERM 1631 1227681 - 1227666 - R 71 -10.4 -2.73799 | overlap 1227663 1227662 GCCAGAAATAAGTGA GGCACC TTAC GGTGCC TGAGAAAGGGGGAGC bssS 1227959 - 1227705 - | biofilm formation regulatory protein BssS TERM 1632 1228222 - 1228207 - R 100 -11.8 -5.63517 | TGCGCAAATAAAAAA GCCGGG GCGA CCCGGC AAACATACATCACTG dinI 1228551 - 1228249 - | DNA damage-inducible protein I pyrC 1229614 - 1228568 - | dihydroorotase TERM 1633 1229158 - 1229148 - G 83 -8.2 -4.38154 | overlap 1229149 ACAGTGTCGATAAAA CGCG CTT CGCG ATCGAAGATATCAAC TERM 1634 1229710 - 1229695 - R 100 -11.8 -5.47218 | TTGCACGTAAAAAAA GGGCGC GAGC GCGCCC TCCGAAATCAATTGG yceB 1230278 - 1229718 - | hypothetical protein TERM 1635 1230393 - 1230371 - R 100 -10.6 -4.7657 | opp_overlap 1230386 GAAAAAGCTGAAAAA GGCGGCAA GAAAGGG TTGCCGCC TGGCGGGAGTTAGAT grxB 1231050 - 1230403 - | glutaredoxin 2 TERM 1636 1230901 - 1230913 + g 74 -7.7 -4.10161 | ATCATCTTTTTGCAG GATGG GTA CCATC TTTTGACCAATCATC yceL 1232322 - 1231114 - | multidrug resistance protein MdtH rimJ 1232559 - 1233143 + | ribosomal-protein-S5-alanine N-acetyltransferase TERM 1637 1233541 - 1233516 - g 81 -11.8 -3.53012 | opp_overlap 1233500 1233503 TGCGCGGCGCGCAAA CGCCCGGCGA GTTGCG TAGCCGGGCG TCGCGGATGCATGAA yceH 1233179 - 1233826 + | hypothetical protein TERM 1638 1235163 - 1235175 + G 90 -6.2 -5.28826 | overlap 1235172 TTTTGGCGCAGGGAT GGCG ACCGA CGCC TTTTTTGTGGCGTTT mviN 1235098 - 1236591 + | putative virulence factor TERM 1639 1236624 - 1236597 - T 71 -10.7 -2.64472 | gap 1, opp_overlap 1236595, overlap 1236593 GACGGCGTAAATTCA GTGCCTGATAGC GCTGT GCTATCAGGC-C TACAAGGCATTCAGG flgN 1237095 - 1236673 - | flagellar biosynthesis: belived to be export chaperone for FlgK and FlgL TERM 1640 1236830 - 1236842 + g 76 -3.3 -5.1101 | TGCTGGTTGAGGTCG CGAAG ATG CTGCG TTTTTTCGGTAATCG flgM 1237393 - 1237100 - | anti-sigma28 factor FlgM TERM 1641 1237283 - 1237296 + g 81 -3.8 -5.14563 | overlap 1237286 CGTTACGCTGGCGCT CGTC GCGGCG GACG TTTTTTCCTGACGCG TERM 1642 1237286 - 1237311 + g 78 -2.5 -5.24129 | gap 1, overlap 1237283 TACGCTGGCGCTCGT CGCGGC-GGA CGTTTTT TCCTGACGCG TTTTTTGTACCGGCG flgA 1238144 - 1237485 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1643 1238120 - 1238110 - G 74 -8.2 -3.92324 | overlap 1238111 GGGCTGAACAGCAAA GCCG CCA CGGC GAATCCTCGTTTTAA TERM 1644 1238218 - 1238228 + H 71 -6.8 -4.1552 | CGCAATAAATAGCGA CGCA TTT TGCG TTTATTCCGGCGATA flgB 1238301 - 1238717 + | flagellar basal body rod protein FlgB flgC 1238721 - 1239125 + | flagellar basal body rod protein FlgC flgD 1239137 - 1239835 + | flagellar basal body rod modification protein flgE 1239862 - 1241073 + | flagellar hook protein FlgE TERM 1645 1241188 - 1241229 + G 74 -11.5 -3.18507 | gap 1 CTAATGCCTCAACGC CGGGCTTTCGCGCGCAGC TTAACGC GCTACGCGCG-GTGCCCG TTGATGGCCTCTCTT flgF 1241094 - 1241849 + | flagellar basal body rod protein FlgF flgG 1241863 - 1242645 + | flagellar basal body rod protein FlgG TERM 1646 1242648 - 1242679 + F 75 -11.4 -3.09004 | overlap 1242643 GACGCAACTCTAAGG GGCCGCCGGTGGGG GATA CGCCACCGGCTCCC TGATTTTGAAGATGA TERM 1647 1242725 - 1242709 - g 70 -2.9 -4.75776 | overlap 1242711 1242712 AAGGTAATGCAAAAA TACGCGC TTC ACGCTTA CCCAGTTATGGCCCT flgH 1242691 - 1243398 + | flagellar basal body L-ring protein flgI 1243404 - 1244507 + | flagellar basal body P-ring protein TERM 1648 1244957 - 1244925 - g 100 -21.3 -4.24606 | opp_overlap 1244952 AAGCCATACCGAAAA CGCCGGACAGCAGCG ATG CGCCGCTCTCCGGCG ACAGTAAAGACTTTC TERM 1649 1245026 - 1245015 - g 74 -7.2 -4.20516 | opp_overlap 1245014 TGGCCAGCGAACAAA GCGG GGTG CCGC ATCATCTGATTCTGG flgJ 1244507 - 1245457 + | peptidoglycan hydrolase TERM 1650 1245810 - 1245796 - g 81 -8.6 -4.24342 | overlap 1245809 CGCGCTATGAACAAA TGTCGA AAA TCGACA ACCTGCTGGCCGATA flgK 1245522 - 1247183 + | flagellar hook-associated protein FlgK TERM 1651 1247881 - 1247869 - g 85 -4.7 -5.26119 | CGTGGAAAAAGAAAA GGCCG CTG CCGCC ATTGATAAAACCAAT flgL 1247198 - 1248151 + | flagellar hook-associated protein FlgL TERM 1652 1248195 - 1248223 + T 100 -14.6 -5.55664 | TGGATATGTTTTGTC TGCCCGCGCC ATCGACCCC GGCGCGGGCA TTTTTTTAGTCGTCA TERM 1653 1248372 - 1248389 + T 95 -12.7 -4.09542 | opp_overlap 1248372 AAGGGGCATAAAAAA GCCGACC TGGC GGTCGGC TTTGTATCGGTATTT TERM 1654 1248389 - 1248372 - T 100 -12.7 -5.25803 | opp_overlap 1248372 AAGGGGCATAAAAAA GCCGACC TGGC GGTCGGC TTTGTATCGGTATTT rne 1251614 - 1248408 - | ribonuclease E TERM 1655 1249808 - 1249820 + g 76 -3.3 -5.11112 | GCTTGCGACGATCCT GCTGA CGC TCCGC TTTTTCTTCCGCTTT SC1133 1251750 - 1251998 + | hypothetical protein rluC 1252188 - 1253147 + | 23S rRNA pseudouridylate synthase C SC1135 1253285 - 1254046 + | putative inner membrane lipoprotein TERM 1656 1254325 - 1254307 - g 73 -5.9 -4.4009 | CCCTATGGGATAAAA CGCACCG TACAT CGGTTCG TAATGCCAATGCTTT SC1136 1254252 - 1254476 + | hypothetical protein TERM 1657 1254545 - 1254531 - T 83 -10 -4.13945 | opp_overlap 1254530 1254529 AGGGGTATTTGAAAA GCCTAC AGA GTAGGC CGTTTACTGCTGTAG maf 1255133 - 1254549 - | Maf-like protein TERM 1658 1255263 - 1255291 + H 83 -10.3 -3.74077 | opp_overlap 1255269, overlap 1255269 GTGTGCGAATTATTG GCAAAAGGCAACC GCA GGCTGCCTTTTTC TTTGACTATATGACG TERM 1659 1255285 - 1255269 - H 83 -10.1 -4.12902 | opp_overlap 1255263 1255269 GAATTATTGGCAAAA GGCAACC GCA GGCTGCC TTTTTCTTTGACTAT TERM 1660 1255269 - 1255285 + H 95 -7.9 -5.31519 | opp_overlap 1255269, overlap 1255263 GAATTATTGGCAAAA GGCAACC GCA GGCTGCC TTTTTCTTTGACTAT yceD 1255331 - 1255852 + | hypothetical protein rpmF 1255904 - 1256077 + | 50S ribosomal protein L32 TERM 1661 1257048 - 1257037 - g 90 -5.8 -5.24129 | GTTGGTTACAAAAAA GCCT GACG AGGC GATTCAGTCACCTCA plsX 1256211 - 1257290 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 1257370 - 1258323 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1662 1258531 - 1258514 - g 70 -3.3 -4.74539 | gap 1, opp_overlap 1258514, overlap 1258515 AAGAACTGAATAAAA CCTGGCAG ACG CAGCC-GG CGTTATTAACCGCTT TERM 1663 1258551 - 1258564 + G 71 -9.5 -3.53012 | opp_overlap 1258541 ATTAACCGCTTCCGT CGCGC TTTG GCGCG TTTGGCAGCAGCAGG fabD 1258339 - 1259268 + | acyl carrier protein S-malonyltransferase fabG 1259281 - 1260015 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 1260171 - 1260407 + | acyl carrier protein TERM 1664 1260443 - 1260415 - f 71 -9.6 -3.15056 | gap 1, opp_overlap 1260416 1260419, overlap 1260413 AGGCGTAAGTGAACA TCTCCAGGCGGTC GTTC GACCGCCTG-AGT TTTATCTTTTTGTCC TERM 1665 1260416 - 1260442 + F 100 -13.1 -5.02287 | gap 1, opp_overlap 1260415 1260413, overlap 1260419 GGCGTAAGTGAACAT CTCCAGGCGGTC GTTC GACCGCCTG-AG TTTTATCTTTTTGTC TERM 1666 1260419 - 1260440 + F 90 -15.9 -2.72919 | opp_overlap 1260415 1260413, overlap 1260416 GTAAGTGAACATCTC CAGGCGGTC GTTC GACCGCCTG AGTTTTATCTTTTTG TERM 1667 1261162 - 1261137 - g 85 -12.5 -3.51329 | GACCCGCAACGATAA CCCACAGGCGG CGAG CCGTCCGTGGG ATAAAGAACGCGATG fabF 1260493 - 1261734 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1668 1261780 - 1261764 - f 81 -5 -5.17744 | opp_overlap 1261764, overlap 1261758 AGACATTAATAAAAA GGTCCG CTTGT CGGGCC TTTTTTATCAGGCAT TERM 1669 1261764 - 1261780 + F 87 -7.2 -5.24531 | opp_overlap 1261764 1261758 AGACATTAATAAAAA GGTCCG CTTGT CGGGCC TTTTTTATCAGGCAT SC1146 1261848 - 1262249 + | putative cytoplasmic protein TERM 1670 1263071 - 1263035 - g 100 -16.1 -3.54741 | opp_overlap 1263042, overlap 1263037 1263042 CACCAGGCCCTGAAA TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA GACAAAAAACTGTCA TERM 1671 1263069 - 1263037 - g 100 -16.5 -3.35046 | opp_overlap 1263042, overlap 1263035 1263042 CCAGGCCCTGAAATA CAAAACGCCCGATGA TGT TCATCAGGCGTTTTA CAGACAAAAAACTGT TERM 1672 1263064 - 1263042 - g 100 -14.2 -4.78848 | opp_overlap 1263042, overlap 1263037 1263035 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA TERM 1673 1263042 - 1263064 + G 91 -12 -4.07568 | opp_overlap 1263037 1263035 1263042 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA yis2 1262420 - 1263103 + | putative integrase protein pabC 1263173 - 1263982 + | 4-amino-4-deoxychorismate lyase TERM 1674 1264077 - 1264060 - g 77 -11.3 -3.57144 | GTGGGGATGTGGAAA GTTCGCC ATCT GGCGAAC AGCACGTTACTTATT TERM 1675 1264134 - 1264153 + G 80 -10 -3.96148 | gap 1 GGCGGGAACGGGGCG GCTGG-CGC TTG GCGACCAGC TTTATGATGAAAAAA TERM 1676 1264651 - 1264640 - g 75 -3.6 -4.89063 | overlap 1264641 1264642 TTATTGAAAAAGAAA CGGC TGTC GCCA GCGAACGCGATCAGG yceG 1263985 - 1265007 + | hypothetical protein TERM 1677 1265454 - 1265441 - g 83 -9.5 -4.08692 | opp_overlap 1265443 1265450 GAAGTCGGGCTAAAA CGCGC CAGA GCGCG CGGCGATTTGGATCG tdk 1264997 - 1265638 + | thymidylate kinase TERM 1678 1265691 - 1265674 - g 76 -5.6 -4.72272 | CCCGCCTATGAAAAA CTGGTA GAAAGT TACCAG GCGGGACGTGGGCAC TERM 1679 1266259 - 1266291 + G 78 -11.9 -3.16055 | overlap 1266250 CTGTTGCAGTCTGAA CGCTGGGCGCAGCGT GAG GCGCTGTGTCAGGCG TTAATGGACAGTTTG holB 1265635 - 1266639 + | DNA polymerase III subunit delta' TERM 1680 1266971 - 1266982 + G 71 -7.2 -3.98016 | opp_overlap 1266970 1266971 CCTGAGACCAAAATC CGCC AGCA GGCG TCTTTTATTCATCAT ycfH 1266650 - 1267447 + | putative metallodependent hydrolase TERM 1681 1267519 - 1267492 - f 100 -15.6 -3.59627 | opp_overlap 1267489 1267487, overlap 1267483 AGCAAAGCGCGTAAA GTTCACCGCCAC AAAA GGGGCGGTGAAC GAGCTTATGGAAACA TERM 1682 1268586 - 1268569 - g 74 -6.9 -4.24002 | opp_overlap 1268569 TGCTAAACCGGAAAA CCGCGCA AAAG TGGGCGG TATCATGATTTCCGC ptsG 1267742 - 1269175 + | glucose-specific PTS system IIBC components TERM 1683 1269202 - 1269219 + T 100 -12.7 -5.52384 | opp_overlap 1269202 GTTGGGGAGAATTAA GGCAGCC ATTC GGCTGCC TTTTTTTAATGGCGC TERM 1684 1269219 - 1269202 - T 85 -12.7 -3.44146 | opp_overlap 1269202 GTTGGGGAGAATTAA GGCAGCC ATTC GGCTGCC TTTTTTTAATGGCGC fhuE 1271435 - 1269261 - | ferric-rhodotorulic acid outer membrane transporter ycfF 1271759 - 1272136 + | purine nucleoside phosphoramidase ycfL 1272139 - 1272513 + | putative outer membrane lipoprotein TERM 1685 1272553 - 1272537 - g 72 -2.1 -4.91109 | opp_overlap 1272539 1272541, overlap 1272538 1272541 TTTTGATGACAAAAA TGCATCG CTA CGCTGCC ATTGCTGCGCTGGCG ycfM 1272527 - 1273156 + | putative outer membrane lipoprotein TERM 1686 1273166 - 1273187 + G 76 -10.9 -3.64984 | gap 1, overlap 1273164 CAATAATCCCTTAAC GCGCGACGAG ATC CT-GTCGCGC TATTTTCCCCAGTAT TERM 1687 1273362 - 1273374 + G 90 -6.2 -5.24129 | TTGCCGGCCAGTCTT GCGC CGCGA GCGC TTTTTTATACGCCAG thiK 1273137 - 1273961 + | thiamine kinase TERM 1688 1274866 - 1274876 + G 70 -6.8 -4.08706 | opp_overlap 1274865 CCGATCAAAGCAGAG CGTG TTA CACG TTTGTATCATAAAGG nagZ 1273972 - 1274997 + | beta-hexosaminidase ycfP 1275022 - 1275564 + | hypothetical protein TERM 1689 1275602 - 1275617 + F 100 -10.4 -5.67063 | opp_overlap 1275602 TCAGTGACCGGATAA CCAGCC TTGC GGCTGG TTTTTTTATGCTCAA TERM 1690 1275617 - 1275602 - f 77 -10.4 -3.33492 | opp_overlap 1275602 TCAGTGACCGGATAA CCAGCC TTGC GGCTGG TTTTTTTATGCTCAA TERM 1691 1275751 - 1275790 + F 77 -10.4 -3.41982 | opp_overlap 1275747 CATTAACGTAACTTG TTGTTAATTAAAGGCTAT ACCA ATAACTTTTAATTAACAA TTGGTTGATAAATTT TERM 1692 1275927 - 1275917 - g 89 -3.2 -5.4505 | GGGCGCAAGAAAAAA GCGA AAA TCAC GCTGGTAGACAGAAA ndh 1275842 - 1277122 + | respiratory NADH dehydrogenase 2; cupric reductase TERM 1693 1277130 - 1277161 + F 90 -13.8 -3.42583 | gap 1 TGCATTAATTTCTCT GCGCCTCACCGGC TGCTCGC GCCGGTGAG-CGC TTCTCCATCTCTTGC ycfJ 1277301 - 1277840 + | hypothetical protein TERM 1694 1277863 - 1277889 + T 100 -10.1 -5.60993 | opp_overlap 1277863 GTACTCTGCAAGTTA GCCCCTCATTC GCTCA GGCTGAGGGGC TTTTTTTATCCGAAG ycfQ 1278549 - 1277914 - | TetR/AcrR family transcriptional regulator TERM 1695 1278824 - 1278808 - g 81 -2.1 -5.30575 | GAAAAACGTAAAAAA CCTCATC GCT GCTGCGG TACTAAGTTCGCTCT ycfR 1278725 - 1279048 + | putative outer membrane protein TERM 1696 1279125 - 1279092 - T 100 -12.5 -5.18726 | opp_overlap 1279098, overlap 1279098 TTGCCACAATAAAAA GAGAAAGCCTCGCGA TGCA TCGCGAGGCTTTTTT GTCGGTCAGCTATTC TERM 1697 1279119 - 1279098 - T 100 -15.9 -4.64423 | opp_overlap 1279098, overlap 1279092 CAATAAAAAGAGAAA GCCTCGCGA TGCA TCGCGAGGC TTTTTTGTCGGTCAG TERM 1698 1279098 - 1279119 + T 100 -15.9 -5.28176 | opp_overlap 1279098 1279092 CAATAAAAAGAGAAA GCCTCGCGA TGCA TCGCGAGGC TTTTTTGTCGGTCAG ycfS 1280110 - 1279145 - | hypothetical protein TERM 1699 1279896 - 1279924 + g 76 -3.2 -5.03314 | gap 1, opp_overlap 1279903, overlap 1279898 ATGCCGGGGTTGGCC TGTAAC-AGGGCT AAAA AGCCCACGTTATA TTTTTTGGCGATCGC TERM 1700 1280251 - 1280223 - R 72 -10.3 -2.85069 | gap 1, overlap 1280220 1280218 AATTTGTAAAGATTA GGCCGGACG-CA GAGTAA TGACGCCCGGCC TGACGCTTATGCAAT mfd 1283704 - 1280258 - | transcription-repair coupling factor TERM 1701 1281220 - 1281232 + g 83 -10.5 -4.01564 | overlap 1281210 GCACCAGTTCCGCCA GCCGC TCT GCGGC TTTCTGAATATTTTC TERM 1702 1282043 - 1282072 + g 82 -11.4 -3.85698 | gap 1, overlap 1282058 1282058 TTCCGCCGCTTTCTG CCGGGCGCGCGAC CAGGC GTCGC-CGCCCAG TTTATGCAGCGGCGC TERM 1703 1282563 - 1282549 - G 80 -4.2 -5.08824 | TTTCCACCGAAAAAA TCACCG GAC CGCTGA AAGATTCGAGGAACT TERM 1704 1283294 - 1283308 + g 90 -5.6 -5.14563 | opp_overlap 1283259, overlap 1283259 1283258 GCGCAGAGCGTCGCG GGACAG CCG CTGGCC TTTTTTCATCACCAG TERM 1705 1283678 - 1283692 + g 75 -6.4 -4.58395 | GCCCGCTTTTGTCGG CAGCGT GTA ACGTTG TTTTTCAGGCATAAC ycfU 1283931 - 1285241 + | outer membrane-specific lipoprotein transporter subunit LolC lolD 1285234 - 1285935 + | lipoprotein transporter ATP-binding subunit ycfW 1285935 - 1287179 + | outer membrane-specific lipoprotein transporter subunit LolE TERM 1706 1288086 - 1288097 + G 78 -2.2 -5.1615 | gap 1, overlap 1288042 GGATGCAGGTGGGAT GC-GC GGT GCTGC TTTTTTACATCTTAC ycfX 1287208 - 1288119 + | N-acetyl-D-glucosamine kinase cobB 1288138 - 1288959 + | NAD-dependent deacetylase potD 1290087 - 1289041 - | spermidine/putrescine ABC transporter periplasmic substrate-binding protein TERM 1707 1290107 - 1290121 + r 72 -8.5 -3.75115 | opp_overlap 1290106, overlap 1290103 CGTCCCCTGAATTAC GGGCC TTATC GGCCC TTGGTTTTATCACGA potC 1290891 - 1290112 - | spermidine/putrescine ABC transporter membrane protein TERM 1708 1290648 - 1290625 - G 81 -11.7 -3.53012 | TGGCTTCCCGCGAAA GCGGTAGCG ATAAAG CGCCACCGC GGTTAACGAGCCAAT TERM 1709 1291240 - 1291218 - R 73 -2.1 -5.26316 | gap 1 TGATTTTATAAAAAA CAACATAAAC AGCC GCTT-TGTTG TTCTGAGCGAACGTG sifA 1292218 - 1291208 - | secreted effector protein TERM 1710 1291418 - 1291437 + g 74 -2.2 -5.09895 | overlap 1291420 AAACGTCTTATCCGC TAGTAAAA CCTC TTTTACCA TTTTTTCAATAGGTA TERM 1711 1291603 - 1291613 + g 70 -3.2 -4.6971 | GAATTTTCGCTGCCA GGTA GGT TGCC TTTTCTTGCGCTTTC SC1175 1292453 - 1292277 - | hypothetical protein potB 1293410 - 1292547 - | spermidine/putrescine ABC transporter membrane protein TERM 1712 1292595 - 1292583 - G 76 -10.5 -3.67597 | CTTCTTATTCAATAA GCGGG AAG CCCGC CAGTAAATCAACAGC potA 1294530 - 1293394 - | putrescine/spermidine ABC transporter ATPase protein TERM 1713 1294149 - 1294175 + g 84 -5.7 -5.09895 | opp_overlap 1294133, overlap 1294137 GCAGCGCATCGGTCA CGCGAGGCGCT ATCTC GGCGGCTGGCG TTTTTTGCATCCGTA TERM 1714 1294968 - 1294946 - g 72 -4.1 -4.76892 | gap 1 ACATTAAGTGAAAAA GGGA-CGTTG ATGG CGACGCTCCC GGCCAATGTTGAGGG pepT 1294781 - 1296010 + | peptidase T TERM 1715 1296045 - 1296072 + G 74 -3.4 -4.87665 | overlap 1296049 TGAAGCGTTTTATTA TTTATGGAGGGA TATT TTCCGCCATCAA TTTTTCTGCCTGGAG TERM 1716 1296358 - 1296385 + G 70 -3.3 -4.79451 | overlap 1296348 TTATCCGGGCGATCG GGCCGATATGT TTGAAC ACCTGGCGGCC TTTTATGTTTACAGT TERM 1717 1296701 - 1296714 + G 76 -3.1 -5.00616 | gap 1 ACCTGGGATAATCGT GA-GCG CGT CGCCTC TTTTTTGCAGCAGAA TERM 1718 1297058 - 1297043 - g 90 -10.4 -4.34263 | opp_overlap 1297037 CTGGAAGAATATAAA CGTCGG CAGT CCGACG TATCCATGGTGTTGT SC1179 1296014 - 1297348 + | putative periplasmic protein ycfD 1298539 - 1297388 - | hypothetical protein phoQ 1300053 - 1298590 - | sensor protein PhoQ TERM 1719 1298910 - 1298920 + g 74 -6.8 -4.25104 | CGTTGCCCATCACTT CGAC AAA GTCG TTTTGCTCGCCGACA phoP 1300727 - 1300053 - | DNA-binding transcriptional regulator PhoP TERM 1720 1300843 - 1300813 - R 76 -9.1 -3.67724 | overlap 1300811 1300814 TAAACCAGACAAATA GTCACCCTCTTTC TGAAG AAAAGAGGGTGAG GCAGGCATTATTTAA TERM 1721 1300842 - 1300814 - R 79 -12.6 -2.7955 | overlap 1300813 1300811 AAACCAGACAAATAG TCACCCTCTTTC TGAAG AAAAGAGGGTGA GGCAGGCATTATTTA purB 1302221 - 1300851 - | adenylosuccinate lyase TERM 1722 1301894 - 1301912 + g 81 -3.8 -5.27335 | gap 1, overlap 1301894 1301895 CGGAAACGTCATGTA G-CGCCG GGATCG CGGCGAC TTTTTCTTTCAGGAA TERM 1723 1302164 - 1302146 - G 71 -4.4 -4.58395 | opp_overlap 1302146 1302147 1302150, overlap 1302147 CGTATTCGCTAAAAA TTCCGCGC AGC GCGCTGAC TTTATCGCCGTAGCG ycfC 1302872 - 1302225 - | hypothetical protein TERM 1724 1302944 - 1302895 - R 85 -7.2 -4.93877 | opp_overlap 1302895 1302902 TTGTATCAAATAAAA TACACTTCATCTTTTAAGCCGC TTTGAG GCGACTTGAATGATGTTGTGTA TTGAATAATCAGACC trmU 1304059 - 1302953 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase ymfB 1304574 - 1304113 - | putative MutT-like protein TERM 1725 1304358 - 1304332 - G 76 -2.9 -5.12068 | gap 1 GATAGCGAATAAAAA GCGCAGGA-ACG GGGT CTTATCCGGCGC AATCCACTGATGCAT SC1187 1304915 - 1304586 - | putative periplasmic protein ymfC 1305571 - 1304912 - | putative ribosomal large subunit pseudouridine synthase TERM 1726 1305441 - 1305453 + g 76 -2.7 -5.11613 | overlap 1305442 CGCTTAACGTAGTGA TTTCT AAA AGAAG TTTTTTGCATGGTGT TERM 1727 1306479 - 1306468 - g 71 -7.2 -3.965 | GCTGAAAATTAAGAA CCCG AACA CGGG TAAAGAGGTCGTGGT icdA 1305665 - 1306915 + | isocitrate dehydrogenase TERM 1728 1306935 - 1306965 + T 93 -12.7 -3.82084 | opp_overlap 1306935 1306941, overlap 1306941 GATAATTGTTAAAAA CAAAAACGGGGAC TTAAC GTCCCCGTTTTTA TTATTAGTATTCGAA TERM 1729 1306965 - 1306935 - T 100 -14.9 -4.63542 | opp_overlap 1306935 1306941, overlap 1306941 GATAATTGTTAAAAA CAAAAACGGGGAC TTAAC GTCCCCGTTTTTA TTATTAGTATTCGAA TERM 1730 1306941 - 1306959 + T 100 -11.7 -5.31855 | opp_overlap 1306935 1306941, overlap 1306935 TGTTAAAAACAAAAA CGGGGAC TTAAC GTCCCCG TTTTTATTATTAGTA TERM 1731 1306959 - 1306941 - T 100 -11.7 -5.61881 | opp_overlap 1306941 1306935, overlap 1306935 TGTTAAAAACAAAAA CGGGGAC TTAAC GTCCCCG TTTTTATTATTAGTA intE 1308154 - 1307027 - | prophage lambda integrase (Int(lambda)) tnpR 1308400 - 1309608 + | transposase of Tn10 SC1192 1309944 - 1309795 - | hypothetical protein TERM 1732 1309968 - 1309987 + r 72 -5.7 -4.48987 | CTCCTTATAATTTAT TTCGCGC TGCACC GCGTGAA TTTTGGTTGTGCGAA TERM 1733 1310080 - 1310033 - R 83 -10.7 -3.78235 | opp_overlap 1310048, overlap 1310038 1310048 CGATAATTAACAGAA TTACACTTCAATAAATCCCCG CGGCGC CGGGGATTTAATGCAGAGCAA TTACGCTTTAAAGTT TERM 1734 1310075 - 1310038 - R 75 -11.4 -3.02549 | opp_overlap 1310048, overlap 1310033 1310048 ATTAACAGAATTACA CTTCAATAAATCCCCG CGGCGC CGGGGATTTAATGCAG AGCAATTACGCTTTA TERM 1735 1310065 - 1310048 - R 79 -8.4 -4.19678 | opp_overlap 1310048, overlap 1310038 1310033 TTACACTTCAATAAA TCCCCG CGGCGC CGGGGA TTTAATGCAGAGCAA TERM 1736 1310048 - 1310065 + r 72 -8.4 -3.72576 | opp_overlap 1310048 1310038 1310033 TTACACTTCAATAAA TCCCCG CGGCGC CGGGGA TTTAATGCAGAGCAA yfdQ 1310908 - 1310081 - | hypothetical protein TERM 1737 1310961 - 1310977 + r 79 -10.1 -3.72363 | GTGAATTGGTTAGCT GCGGTTC ACT GAGCCGC TTTAAGCTTTCCGTC yfdP 1311322 - 1310966 - | hypothetical protein TERM 1738 1311379 - 1311362 - H 75 -11.3 -3.04322 | opp_overlap 1311361 1311357 1311356 1311362 GTTAACCCCTCAATA TGGCGGT TGCC ACCGCCA GTTGGTTTCTCCACA TERM 1739 1311362 - 1311379 + H 74 -11.3 -2.75997 | opp_overlap 1311362, overlap 1311361 1311357 1311356 GTTAACCCCTCAATA TGGCGGT TGCC ACCGCCA GTTGGTTTCTCCACA SC1195 1311443 - 1311928 + | hypothetical protein TERM 1740 1312359 - 1312322 - T 72 -8.5 -3.75229 | opp_overlap 1312322 CAAATTACATTTAAA TTGCACATTACGCAAGT ATAA AATTGCGATATGTGCAA TTTTGAGTCAAAAAA TERM 1741 1312322 - 1312359 + T 76 -8.5 -4.18018 | opp_overlap 1312322 CAAATTACATTTAAA TTGCACATTACGCAAGT ATAA AATTGCGATATGTGCAA TTTTGAGTCAAAAAA rpc 1313108 - 1312329 - | regulatory protein TERM 1742 1312394 - 1312378 - G 100 -12.3 -6.11644 | opp_overlap 1312377 1312378 TGAGTCAAAAAAAAA GCCACCA TAA TGGTGGC CTTGTCGACGCTTTC TERM 1743 1312378 - 1312394 + g 72 -12.3 -2.59055 | opp_overlap 1312378, overlap 1312377 TGAGTCAAAAAAAAA GCCACCA TAA TGGTGGC CTTGTCGACGCTTTC TERM 1744 1313067 - 1313081 + g 71 -10 -3.48772 | AGCAATTTTCATGTT CTTCGC GCG GCGAAG TTGTCTGACACGGTT TERM 1745 1313514 - 1313491 - g 71 -6 -4.24404 | gap 1, overlap 1313492 ATGGAAAGTTGAAAA GCAGCC-CC GCTGGCT GGTGGCTGC GATTAAAAAGACGAT ymfL 1313459 - 1314013 + | hypothetical protein SC1200 1314656 - 1314348 - | hypothetical protein TERM 1746 1315107 - 1315120 + GH 100 -5.9 -5.58179 | opp_overlap 1315099 1315107 CAATATAGAGCACAA CCGCG CTCA TGCGG TTTTTTCTTGTCATG TERM 1747 1315341 - 1315357 + GH 73 -10.9 -2.51133 | opp_overlap 1315344, overlap 1315344 TGAAATTAGAATTAT TAACGGC CAA GCCGTTA CTTCCTCCCTGGCTG TERM 1748 1315620 - 1315648 + GH 70 -3 -4.72846 | opp_overlap 1315627, overlap 1315627 TGCCTTTAACCAGAT GGAGAAACGCTG CATTA CGGCGTTATCCC TTTTTGACTATCTCC TERM 1749 1315761 - 1315772 + GH 100 -7.2 -5.71712 | opp_overlap 1315753 1315761 CATCACAGCGCACAA CCGC GCCT GCGG TTTTTTTGTGTGCAA TERM 1750 1316392 - 1316380 - gH 89 -9.1 -4.58395 | overlap 1316358 CCCATGCTGGAAAAA GCGGA ATC TCCGC TGGCCGTAAGCCTGT SC1198 1314010 - 1316490 + | putative antirepressor TERM 1751 1316710 - 1316684 - fH 82 -8 -4.56597 | TCGTTCCGGCAAAAA CATGAAGCATCT CGG AGGTGCTGCATG AGCATGGAACTGATG SC1201 1316708 - 1317526 + | putative replication protein TERM 1752 1318506 - 1318493 - g 72 -2.3 -4.93696 | opp_overlap 1318496, overlap 1318496 CCGAAAGATGAAAAA CAGGT GCCT ACCGG CGCTTTCTTTGCGGG TERM 1753 1318496 - 1318509 + G 73 -5.9 -4.41348 | opp_overlap 1318493 1318496 AAAGATGAAAAACAG GTGCC TACC GGCGC TTTCTTTGCGGGGGC fdM 1318010 - 1318663 + | DNA adenine methylase rusA 1318660 - 1319049 + | crossover junction endodeoxyribonuclease SC1204 1319066 - 1319926 + | hypothetical protein TERM 1754 1320007 - 1320028 + G 70 -10.1 -3.32946 | opp_overlap 1320007, overlap 1320005 1320008 CGGGATCGGAACTGA TGCCCCTGT TTAT GCAGGGGCG TGTTCTGCTTGAACC ydfU 1319934 - 1320923 + | putative cytoplasmic protein SC1206 1320938 - 1321516 + | hypothetical protein TERM 1755 1321565 - 1321580 + F 100 -7.5 -5.96219 | opp_overlap 1321565 1321564 AGCAACACACACAAG CCCGC CACTGA GCGGG TTTTTTTTGTACCTG TERM 1756 1321682 - 1321671 - f 73 -4.4 -4.82901 | GTGGTTGGACAAAAA CGTA TATC TACG ATCCAACGAGGGAAT SC1207 1321742 - 1322161 + | hypothetical protein TERM 1757 1322190 - 1322176 - f 79 -9.2 -4.1466 | opp_overlap 1322176 ACGCAACCTGGAAAA CCCGCA TTG CGCGGG TTTTTGTATCCGAAA TERM 1758 1322176 - 1322190 + F 91 -8.5 -4.96848 | opp_overlap 1322176 ACGCAACCTGGAAAA CCCGC ATTGC GCGGG TTTTTGTATCCGAAA SC1208 1322370 - 1322552 + | hypothetical protein TERM 1759 1322989 - 1323005 + G 74 -9.5 -3.65485 | overlap 1322988 1322985 CTTAACAGTCAGGAT CTGAACA GCC TGTTCAG TATTCTTTCTCGTAT SC1209 1322662 - 1323051 + | putative prophage membrane protein SC1210 1323038 - 1323319 + | putative prophage membrane protein TERM 1760 1323791 - 1323801 + G 85 -4.6 -5.28176 | overlap 1323778 GTCATGCCGCCCGAT CCGC AGC GTGG TTTTTTGTGGCTAAA SC1211 1323319 - 1323933 + | Fels-1 prophage putative chitinase TERM 1761 1323968 - 1323994 + G 100 -10.9 -5.60689 | TAAAAAATTCTGGAA GCCATTAGCAG AAATA CTGCTGGTGGC TTTTTTGTTATGTGC VG55 1323930 - 1324472 + | protein gp55 precursor SC1213 1324527 - 1325078 + | hypothetical protein TERM 1762 1325261 - 1325315 + F 76 -11.7 -2.60496 | gap 1, opp_overlap 1325261, overlap 1325260 1325265 1325312 TTTTTTTAGAAAAAA GAAAGGATCTGCTGAATAACGTTTTT AGTT AAAAACGAAGATC-GCAGATCCTTTC CTGTTTCCGGGAGAC TERM 1763 1325315 - 1325261 - f 100 -9.5 -5.24129 | gap 1, opp_overlap 1325261 1325260 1325265 1325312 TTTTTTTAGAAAAAA GAAAGGATCTGCTGAATAACGTTTTT AGTT AAAAACGAAGATC-GCAGATCCTTTC CTGTTTCCGGGAGAC terS 1325337 - 1325882 + | Gifsy-1 prophage DNA packaging protein TERM 1764 1326545 - 1326557 + GF 77 -7.7 -4.35116 | opp_overlap 1326529 CGGCAAATGAATCGG CGCAT TTT ATGCG TTTTCATGTACCGTG TERM 1765 1326981 - 1326970 - gf 71 -4.4 -4.56597 | opp_overlap 1326970 GCGGTGGCCGAAAAA CTCA GCCA TGAG CTTTTGCTGGAAAAA TERM 1766 1327309 - 1327294 - gf 91 -3.9 -5.4477 | AAACGCTCAAAAAAA CACGG CATTTT CCGCG TGCTGCCTGTCAAAG TERM 1767 1327489 - 1327507 + GF 73 -5.2 -4.57569 | overlap 1327491 CCTTATGCGATCCGC TTTCCGGA TAA TCCGGATG TTTTTACGGAGGTGG TERM 1768 1327491 - 1327505 + GF 80 -10 -3.90316 | overlap 1327489 TTATGCGATCCGCTT TCCGGA TAA TCCGGA TGTTTTTACGGAGGT terL 1325854 - 1327785 + | Gifsy-1 prophage terminase large chaing gp2 vhtJ 1327769 - 1327972 + | Gifsy-1 prophage head to tail joining protein TERM 1769 1328367 - 1328410 + G 83 -6 -4.83615 | overlap 1328368 1328380 GCGGACTTTTACAGA GTTCATCCGTGAAGGCGTGG GCGT TCACGCCTTTAATGGTGAAA TTTTTCTCCAGCCTG TERM 1770 1328368 - 1328409 + G 71 -9.5 -3.49687 | overlap 1328367 1328380 CGGACTTTTACAGAG TTCATCCGTGAAGGCGTGG GCGT TCACGCCTTTAATGGTGAA ATTTTTCTCCAGCCT TERM 1771 1328380 - 1328397 + G 73 -9.1 -3.79519 | overlap 1328368 1328367 GAGTTCATCCGTGAA GGCGTGG GCGT TCACGCC TTTAATGGTGAAATT TERM 1772 1329228 - 1329246 + G 73 -5.8 -4.48987 | overlap 1329224 GATACGGGGAGTTAT CCGGGCAC CCC GGGCCAGG TTTTCCTTCTGGGAG vgpW 1327969 - 1329549 + | Gifsy-1 prophage head-tail preconnector gp4 TERM 1773 1329599 - 1329614 + G 91 -7.5 -5.08255 | CCGTTGCTGCTTGAA CCCGC CTATGC GCGGG TTTTCTTTTGCGCGT TERM 1774 1329920 - 1329946 + G 74 -10 -3.727 | overlap 1329921 1329930 CTGCTGGATATTGAC AGTCCCGGCGGT CAG GCTGCCGGGGCG TTTGACTGTGCTGAC TERM 1775 1329921 - 1329945 + G 79 -13.5 -2.83299 | overlap 1329920 1329930 TGCTGGATATTGACA GTCCCGGCGGT CAG GCTGCCGGGGC GTTTGACTGTGCTGA vg05 1329539 - 1331035 + | Gifsy-1 prophage head-tail preconnector gp5 TERM 1776 1331077 - 1331090 + G 77 -8.1 -4.09685 | opp_overlap 1331076 CACTATTGAGAAACG TGCGG ATAA CCGCA TTTTCGCCGGTAACG hdpD 1331048 - 1331395 + | Gifsy-1 prophage head protein gpshp TERM 1777 1331402 - 1331416 + F 95 -12.8 -4.1043 | opp_overlap 1331402 TTACCGTAATAAGAA GGCCGC GAA GCGGCC TTTATCGTATTTAAC TERM 1778 1331416 - 1331402 - f 95 -12.8 -3.96068 | opp_overlap 1331402 TTACCGTAATAAGAA GGCCGC GAA GCGGCC TTTATCGTATTTAAC SC1220 1331450 - 1332478 + | Gifsy-1 prophage head protein gp7 TERM 1779 1332490 - 1332504 + F 95 -11.4 -4.45068 | opp_overlap 1332490 TTAAGCATCCCAAAA GGCCTG ATT CAGGCC TTTATTGTTACAAAT TERM 1780 1332504 - 1332490 - f 89 -11.4 -4.17023 | opp_overlap 1332490 TTAAGCATCCCAAAA GGCCTG ATT CAGGCC TTTATTGTTACAAAT vgp7 1332536 - 1332895 + | Gifsy-1 prophage DNA packaging protein gp9 mcpF 1332906 - 1333289 + | Gifsy-1 prophage minor capsid protein FII gipA 1334452 - 1333322 - | Gifsy-1 prophage GlpA TERM 1781 1333786 - 1333796 + g 72 -2.4 -4.8622 | overlap 1333777 TGGCGCGGTTCTTTG AGCC TTT GGCC TTTTTGCTTAACCGG TERM 1782 1333947 - 1333909 - G 71 -9.7 -3.51976 | overlap 1333905 AATCTTTTAAACCAA CATCAATGCCGACCA TTGAAGAGG TGATCGGCAGTGATG CGGATTCAAATTCGC TERM 1783 1334000 - 1333975 - G 73 -9.1 -3.82097 | gap 1, opp_overlap 1333980, overlap 1333979 CGCAAAGGCACGAAA CAAAG-TACCGC CCT GCGGCATCTTTG GAAATGGTGACGGTA TERM 1784 1334423 - 1334373 - G 73 -9.1 -3.83502 | overlap 1334374 1334377 GAGTTGTAGACGAAA CGCACACAACCGAAC-GTCTGAGCT AAA AGCTCAGCCTGCTCAGTCGTGGG-G TAAAACCGGTATTTA TERM 1785 1334420 - 1334377 - G 81 -14 -2.69601 | gap 1, overlap 1334373 1334374 TGTAGACGAAACGCA CACAACCGAAC-GTCTGAGCT AAA AGCTCAGCCTGCTCAGTCGTG GGGTAAAACCGGTAT TERM 1786 1334520 - 1334539 + H 100 -16.4 -3.53343 | opp_overlap 1334507 1334506 ACCGCCTCCTTTCCT CCCCGGCC TGAA GGCCGGGG TTTCCCGGAGGCATT vmtZ 1334558 - 1335136 + | Gifsy-1 prophagei VmtZ TERM 1787 1335184 - 1335203 + G 71 -7.8 -3.98658 | GAAAAGCTGGAATCC GTGACTGG CGCA CCTGTCAC TCTTTTTGATGGACT vmtU 1335133 - 1335534 + | Gifsy-1 prophage VmtU TERM 1788 1335783 - 1335771 - g 70 -5.5 -4.38712 | overlap 1335772 CGCAGGGGCAGAAAA GCGTC GGT GACAC CACGGCCACGCTGGC vmtV 1335545 - 1336288 + | Gifsy-1 prophage VmtV TERM 1789 1336306 - 1336321 + F 86 -11.8 -3.48924 | CTCTCTTATCAGTCC GCCCCG GTTC CGGGGC TTCTATGGAAAATCA SC1227 1336339 - 1336734 + | Gifsy-1 prophage minor tail protein vmtT 1336755 - 1337069 + | Gifsy-1 prophage VmtT TERM 1790 1337383 - 1337408 + GF 71 -4.6 -4.56775 | TCAGCGGCTGTGGCG GCAGCACAGG ACAGGA CAAGTGCTGC TTTTTACCGCCAGAT TERM 1791 1337659 - 1337636 - gf 71 -10.3 -2.7169 | overlap 1337628 1337626 TGAAAGAGCAGACGA CGGTACAGG GCCTCT CCCGTACCG AGCTGCTGCGGGTGA TERM 1792 1338570 - 1338560 - gf 77 -4.6 -4.96848 | CGCGCGACAGAAAAA CGCC CTG GACG GTGTCTTCCTCCCAG TERM 1793 1338872 - 1338846 - gf 74 -2.9 -4.87786 | overlap 1338848 TGAACGTCATAAAAA GGCGTTGTCAC AACAG GCGAAAAAGCC AAAGACTTACCACAA TERM 1794 1339011 - 1338983 - gf 74 -2.4 -5.1101 | gap 1, opp_overlap 1338983 CCACGACCGAAAAAA TGACGGAAGC-GC ATAA GCAGCTTTTGTCA TTTCAGCAGCGCATC vmtH 1337041 - 1340082 + | Gifsy-1 prophage VmtH vmtM 1340085 - 1340414 + | Gifsy-1 prophage VmtM vmtL 1340424 - 1341122 + | Gifsy-1 prophage VmtL vtaK 1341312 - 1341866 + | Gifsy-1 prophage VtaK vtiI 1341905 - 1342411 + | Gifsy-1 prophage VtiI TERM 1795 1342427 - 1342456 + F 100 -12.9 -4.43189 | opp_overlap 1342422 1342435, overlap 1342428 1342435 CAACAGAACAGATTC AGACAGAACCGCC TCCG GGCGGTTTTGTCG TTTTATGGGGTTAAT TERM 1796 1342428 - 1342455 + F 100 -16.4 -3.25191 | opp_overlap 1342422 1342435, overlap 1342427 1342435 AACAGAACAGATTCA GACAGAACCGCC TCCG GGCGGTTTTGTC GTTTTATGGGGTTAA TERM 1797 1342435 - 1342448 + F 93 -9.5 -4.70046 | opp_overlap 1342422 1342435, overlap 1342428 1342427 CAGATTCAGACAGAA CCGCC TCCG GGCGG TTTTGTCGTTTTATG TERM 1798 1342448 - 1342435 - f 75 -9.5 -3.61239 | opp_overlap 1342435 1342428 1342427, overlap 1342422 CAGATTCAGACAGAA CCGCC TCCG GGCGG TTTTGTCGTTTTATG TERM 1799 1342506 - 1342495 - g 74 -7.2 -4.08064 | AAGGGCGGCGGAAAA GGGC ATAC GCCC CGCGAGGCACCGGAT TERM 1800 1344404 - 1344422 + G 74 -3 -4.86621 | overlap 1344386 GCTGGGACACACCGC GAGTCGTT AAG GGCGTCTC TTTTTCGTTGCGCCT TERM 1801 1345579 - 1345565 - g 81 -8.6 -4.26589 | ATCAGATAGGGAAAA CCATCA CGG TGATGG CTAACTGTGAGCGTA vhsJ 1342474 - 1345836 + | Gifsy-1 prophage VhsJ TERM 1802 1345903 - 1345923 + G 100 -9 -5.09259 | gap 1, overlap 1345897 1345904 GCGTAATTTCTCTGG CGG-CAGGG CTTT CCCTGTCCG TTTTATTTTCCACTG SC1235 1345875 - 1346117 + | hypothetical protein TERM 1803 1346136 - 1346153 + TF 100 -10.5 -5.24129 | GTGAATGAATCTGAA GCCTGCC TGCG GGCGGGC TTTTTTATGGAGGCA TERM 1804 1346562 - 1346507 - gT 93 -13.8 -3.62597 | GCGATGGTGGAAGAA GTTGCCCGCCAGGCATCGGAGGCATC GCGG AATGCCACCGCCGCAGGGCAGGCATC TGAACAGGCGCAGAC TERM 1805 1346632 - 1346602 - gT 72 -10.3 -2.76492 | overlap 1346601 1346620 1346624 TCAGGCATCGGAAAG CGCCACGGCAGCA GTGAA TGCAGCCGGAGCG GCAGAAGCATCAGCC SC1237 1347102 - 1346587 - | hypothetical protein TERM 1806 1346733 - 1346708 - Gg 73 -5.9 -4.4648 | ACGGCGACCACAAAA GCCGGGGAGGC ATCA GCCAGCGCGGC GTCGGCTGACACAGC TERM 1807 1346780 - 1346754 - Gg 95 -15 -3.41125 | overlap 1346747 CTGACACAGCCAGAA CGGCGGCAGCCG CAT CGGCAGCCGCAG CGAAAACATCTGAAG TERM 1808 1347010 - 1346986 - Gg 95 -12.7 -4.08767 | overlap 1346987 GGCAGCGTCGGAAAA GGCGGCAGCCG CAT CGGCAGCCGCA GCGAAAACATCTGAG TERM 1809 1347009 - 1346987 - Gg 100 -16.2 -3.05046 | overlap 1346986 GCAGCGTCGGAAAAG GCGGCAGCCG CAT CGGCAGCCGC AGCGAAAACATCTGA TERM 1810 1347712 - 1347686 - gR 83 -7.2 -4.65895 | overlap 1347688 GGCGCCATGCAAAAA GACCAGAATGGC GGC GACATTCCGGAC AAAAAACAATTTGCG TERM 1811 1347710 - 1347688 - gR 74 -8.4 -3.94812 | overlap 1347686 CGCCATGCAAAAAGA CCAGAATGGC GGC GACATTCCGG ACAAAAAACAATTTG SC1238 1348838 - 1348575 - | hypothetical protein stf 1346171 - 1348849 + | side tail fiber protein TERM 1812 1349370 - 1349357 - g 73 -5.3 -4.64676 | opp_overlap 1349357 CCACCTTTAATAAAA TACAG TGGC CTGTA TTATCACAATAACGA tfaU 1348864 - 1349382 + | hypothetical protein TERM 1813 1349482 - 1349452 - f 85 -6.9 -5.0133 | overlap 1349478 GACGTTGTGAAAAAA CAGGCTGGCAT TAATAAAAT ACACCAGCCTG AAGTAATATTCAGTT TERM 1814 1349595 - 1349606 + F 80 -5.8 -5.07275 | overlap 1349593 ACCACAAATCTGACA CCAC TCTG GTGG TTTTTCTATATCTGG TERM 1815 1349678 - 1349690 + F 71 -3.4 -4.76963 | GTATTGGCGGCCAGC CACT GGAAG AGTG TTTTGTATTATCTGG TERM 1816 1350187 - 1350234 + F 74 -10.8 -3.21924 | opp_overlap 1350201, overlap 1350182 1350201 ACCGTCTTGATCTCC TCATCATCTGATAATACTGTTT GTAT AAACAGTATTATCAGGAGCGGA TATTATGCCCCGTCA SC1240 1350481 - 1350789 + | hypothetical protein TERM 1817 1350801 - 1350818 + TF 86 -4.1 -5.47821 | opp_overlap 1350799 CTGATTGATGTAACG TTGAGAC CACG GTCCCAA TTTTTTTACCTGACT sopB 1351990 - 1350920 - | SopB protein TERM 1818 1351765 - 1351781 + gF 72 -3.6 -4.77165 | opp_overlap 1351754 1351763, overlap 1351767 TAATGCCAGAAATTT TGCGGC CAAAT GCCGGA TTTTGTTGTCCGGAC TERM 1819 1352161 - 1352149 - gR 79 -2.7 -5.24531 | overlap 1352135 AGGGGTTACAAAAAA TGTAA TCC CTACA GGCGGTGGCAAACAG SC1242 1351955 - 1352248 + | hypothetical protein TERM 1820 1352849 - 1352816 - TR 100 -20.5 -2.59431 | opp_overlap 1352820, overlap 1352820 GTTTTTCATAAGTCA TAAAGAGCGGGAACC TATC GGCTCCCGCTCTTTA CAATTCATTGAGTTT TERM 1821 1352845 - 1352820 - TR 100 -16.9 -4.00066 | opp_overlap 1352820, overlap 1352816 TTCATAAGTCATAAA GAGCGGGAACC TATC GGCTCCCGCTC TTTACAATTCATTGA TERM 1822 1352820 - 1352845 + Tr 100 -14.7 -3.69434 | opp_overlap 1352820 1352816 TTCATAAGTCATAAA GAGCGGGAACC TATC GGCTCCCGCTC TTTACAATTCATTGA mppA 1354673 - 1352985 - | periplasmic murein peptide-binding protein precurs SC1244 1355857 - 1354892 - | hypothetical protein TERM 1823 1355526 - 1355536 + g 90 -5.4 -5.23292 | opp_overlap 1355526 GTAATGTCAGAATAG CCAA TAA TTGG TTTTATTTTATCTGG SC1245 1355902 - 1356051 + | hypothetical protein TERM 1824 1356127 - 1356152 + T 71 -9.7 -3.18446 | gap 1, overlap 1356126 1356125 TCTTCTACCGGGGAC TCCCGGAGCCGC CAT GCTG-TCCGGGA TGATTTTGTCGGCTT TERM 1825 1356271 - 1356304 + T 73 -7.5 -4.07568 | overlap 1356274 ATTTCATATCTGACA TTCGTGGAGAATATC CTGA GACATTCTCCGCTAA TTTTAAGACGAACGG TERM 1826 1356434 - 1356447 + T 72 -8.1 -3.75832 | CTTTCTTGTTATTAG GGAGC CGCA GCTCC TTTACGTATCCTTTT SC1246 1356958 - 1356605 - | hypothetical protein TERM 1827 1356675 - 1356689 + g 79 -2.8 -5.13741 | AACTCCGAGATAATT TCTTCA GGT TGTAGA TTTTTGTTGGATTGC icdA 1357089 - 1357265 + | isocitrate dehydrogenase in e14 prophage, specific for NADP+ TERM 1828 1357285 - 1357315 + F 93 -12.7 -3.82084 | opp_overlap 1357285 1357291, overlap 1357291 GATAATTGTTAAAAA CAAAAACGGGGAC TTAAC GTCCCCGTTTTTA TTATTAGTATTCGAA TERM 1829 1357315 - 1357285 - f 100 -14.9 -4.63542 | opp_overlap 1357285 1357291, overlap 1357291 GATAATTGTTAAAAA CAAAAACGGGGAC TTAAC GTCCCCGTTTTTA TTATTAGTATTCGAA TERM 1830 1357291 - 1357309 + F 100 -11.7 -5.31855 | opp_overlap 1357291 1357285, overlap 1357285 TGTTAAAAACAAAAA CGGGGAC TTAAC GTCCCCG TTTTTATTATTAGTA TERM 1831 1357309 - 1357291 - f 100 -11.7 -5.61881 | opp_overlap 1357285 1357291, overlap 1357285 TGTTAAAAACAAAAA CGGGGAC TTAAC GTCCCCG TTTTTATTATTAGTA SC1248 1357713 - 1358798 + | putative cytoplasmic protein TERM 1832 1358852 - 1358866 + F 72 -8.6 -3.69323 | CAAGCTTATTATCAG GCTCTT TAA AAGAGC TTTAAATGATCATGA TERM 1833 1358902 - 1358912 + F 82 -6.8 -4.91194 | TACTTCTTGAGGTAG GCAG TAA CTGC TTTTATATTTATTAT SC1249 1358991 - 1359317 + | hypothetical protein SC1250 1359501 - 1359286 - | hypothetical protein envF 1360611 - 1359823 - | putative envelope lipoprotein TERM 1834 1360587 - 1360601 + g 72 -3.6 -4.75472 | opp_overlap 1360596 GAAGTAAGAGATTTT TATATG TAA CATGTA TTTTATTCATGTGAA TERM 1835 1360667 - 1360642 - R 77 -9.1 -3.87627 | opp_overlap 1360646, overlap 1360640 TTTTTATATAAAATA GATAGTCTTGA CTGG TCGAGACTATC CTGGAAACATAGTAA TERM 1836 1361063 - 1361046 - R 79 -12.7 -2.89191 | opp_overlap 1361046, overlap 1361048 TTATATCGTCACAGA CAGCGCC TCAG GGCGCTG TTTTCGATCGGACAT TERM 1837 1361046 - 1361063 + r 95 -12.7 -4.18197 | opp_overlap 1361046 1361048 TTATATCGTCACAGA CAGCGCC TCAG GGCGCTG TTTTCGATCGGACAT TERM 1838 1361061 - 1361048 - R 70 -9.5 -2.99649 | opp_overlap 1361046, overlap 1361046 ATATCGTCACAGACA GCGCC TCAG GGCGC TGTTTTCGATCGGAC msgA 1361340 - 1361101 - | macrophage survival gene; reduced mouse virulence envE 1362051 - 1361530 - | putative envelope protein cspH 1362678 - 1362466 - | cold shock protein-like protein pagD 1363139 - 1362810 - | PhoP regulated TERM 1839 1364191 - 1364201 + G 75 -4 -4.93365 | GGGCCAGCCTATCGA TTGT CTG ACAA TTTTTCGTTATACGC TERM 1840 1364307 - 1364294 - g 73 -5.3 -4.63218 | CTTTTTCTAACAAAA TTTCC TCAA GGAAA ACGGGATTTGCCTGG pagC 1363885 - 1364442 + | PhoP regulated: reduced macrophage survival TERM 1841 1364481 - 1364452 - T 100 -14.3 -3.68359 | overlap 1364446 1364456 TTCTGAAAAGCATAA GCTATGCGGAAGG TTCG CCTTCCGCACCGC CAGTCACAAAACAGG TERM 1842 1364477 - 1364456 - T 86 -14.5 -2.65876 | overlap 1364446 1364452 GAAAAGCATAAGCTA TGCGGAAGG TTCG CCTTCCGCA CCGCCAGTCACAAAA TERM 1843 1364664 - 1364644 - T 72 -5.4 -4.47217 | AAGCAGGAAGGAAAA TCTGGTGT AAATA ACGCCAGA TCTCACAAGATTCAC TERM 1844 1365394 - 1365362 - T 82 -13.4 -3.05384 | opp_overlap 1365389 GGCCTGGGGATTTAA CCGCGCCAGAGCGT ATGCA AGACCCTGGCGCGG TTGGCCGGTAATCGT TERM 1845 1365653 - 1365633 - T 79 -9.7 -3.66921 | opp_overlap 1365633 1365644 AAGTTGAAGTGGAAA TGCCTGATG AGC CTTCAGGCA TTTCTTAAGGTTAGT TERM 1846 1365633 - 1365653 + T 87 -9.7 -4.21319 | opp_overlap 1365633, overlap 1365644 AAGTTGAAGTGGAAA TGCCTGATG AGC CTTCAGGCA TTTCTTAAGGTTAGT SC1257 1366008 - 1365664 - | lysozyme inhibitor ysdB 1366077 - 1366166 + | protein in the LexA regulon yccB 1366221 - 1366310 + | putative periplasmic protein SC1260 1366386 - 1366511 + | putative lipoprotein TERM 1847 1366551 - 1366577 + T 70 -9.3 -3.41125 | overlap 1366552 GTCATATCTTCAGGT ATGGCGCCCGG AGTAG CCGGGCGCAAA TTGTAGGTGTATAAA TERM 1848 1366552 - 1366576 + T 78 -12.8 -2.64354 | overlap 1366551 TCATATCTTCAGGTA TGGCGCCCGG AGTAG CCGGGCGCAA ATTGTAGGTGTATAA SC1261 1366816 - 1366643 - | hypothetical protein TERM 1849 1366847 - 1366831 - H 79 -9.3 -4.07885 | opp_overlap 1366826 1366831 1366833, overlap 1366832 TATTTCCTCCCAAAA GGCCGCC CGA GGCGGCG CTGGGTTTGATAATG TERM 1850 1366846 - 1366832 - H 80 -12.8 -3.04517 | opp_overlap 1366831 1366826 1366833, overlap 1366831 ATTTCCTCCCAAAAG GCCGCC CGA GGCGGC GCTGGGTTTGATAAT ibp 1367132 - 1367602 + | putative molecular chaperone (small heat shock protein) TERM 1851 1367612 - 1367637 + T 100 -17.7 -3.12351 | opp_overlap 1367603 1367616, overlap 1367616 TTATAATCGCGTTAA TGAAGGCCCGT TTAG ACGGGCCTTCA TTGCCTGTAGCGAAA TERM 1852 1367616 - 1367633 + T 85 -12.7 -3.39142 | opp_overlap 1367603 1367616, overlap 1367612 AATCGCGTTAATGAA GGCCCGT TTAG ACGGGCC TTCATTGCCTGTAGC TERM 1853 1367633 - 1367616 - T 85 -12.7 -3.34192 | opp_overlap 1367616 1367612, overlap 1367603 AATCGCGTTAATGAA GGCCCGT TTAG ACGGGCC TTCATTGCCTGTAGC SC1263 1367860 - 1367711 - | putative inner membrane protein TERM 1854 1368166 - 1368180 + G 74 -7.8 -4.18506 | CGCGAGGGGGAAGCG CACTGG AAT CCGGTG TTATTTTACCCGTCG SC1264 1367941 - 1368984 + | hypothetical protein TERM 1855 1369059 - 1369023 - T 80 -10.1 -3.9461 | gap 1, opp_overlap 1369029, overlap 1369024 GCGCTGGAATAATAA TGCCTTGCCCGGCGTG CTCTGT CACGCCGGG-ATGGCC GAATAGTCATTATTT TERM 1856 1369058 - 1369024 - T 85 -13.6 -2.96444 | gap 1, opp_overlap 1369029, overlap 1369023 CGCTGGAATAATAAT GCCTTGCCCGGCGTG CTCTGT CACGCCGGG-ATGGC CGAATAGTCATTATT SC1265 1369596 - 1369069 - | putative inner membrane protein TERM 1857 1369712 - 1369741 + r 76 -8.5 -4.05607 | opp_overlap 1369718, overlap 1369714 1369718 GCACGTAAAATGGGA TAAAAAGCCGGCG GCAT CGCCGGCTTACTG TTGTTATTGTCCTCT TERM 1858 1369714 - 1369739 + r 72 -8.9 -3.60967 | opp_overlap 1369718, overlap 1369712 1369718 ACGTAAAATGGGATA AAAAGCCGGCG GCAT CGCCGGCTTAC TGTTGTTATTGTCCT TERM 1859 1369735 - 1369718 - R 100 -14.1 -4.90296 | opp_overlap 1369718 1369714 1369712 AAAATGGGATAAAAA GCCGGCG GCAT CGCCGGC TTACTGTTGTTATTG TERM 1860 1369718 - 1369735 + r 93 -14.1 -3.50302 | opp_overlap 1369718, overlap 1369714 1369712 AAAATGGGATAAAAA GCCGGCG GCAT CGCCGGC TTACTGTTGTTATTG SC1266 1370059 - 1369745 - | putative outer membrane lipoprotein TERM 1861 1370119 - 1370090 - H 71 -3.5 -4.76274 | opp_overlap 1370091 1370094, overlap 1370091 1370094 TAAATTAATAGAAAA CTTACCGTCCGAA AATG TCCGGACAGTCAT TTAAAAAGTGGTGTA TERM 1862 1371312 - 1371297 - g 79 -3.2 -5.1861 | overlap 1371298 GTTATGATGAAAAAA CGTTCG CCCG CGAACC GATAGGCGCCGGTCC oxd6A 1370741 - 1372381 + | putative ABC transporter periplasmic binding protein TERM 1863 1372421 - 1372450 + G 73 -6.3 -4.48175 | overlap 1372425 TGCGGCTGATTATTC TGTTGGTGCTGGT GGCT GCCGGCACCTTCA TTTTGCTTAGCTTTT TERM 1864 1372425 - 1372446 + G 74 -10.1 -3.75718 | overlap 1372421 GCTGATTATTCTGTT GGTGCTGGT GGCT GCCGGCACC TTCATTTTGCTTAGC oxd6B 1372378 - 1373355 + | putative ABC transporter TERM 1865 1373575 - 1373594 + G 75 -11.4 -3.31792 | gap 1, opp_overlap 1373566 1373565 ACAAATTGGCGTTGG CGCCGC-GC TGT GCAGCGGCG TTATCGCGCTAGTGA oxd6C 1373345 - 1374157 + | putative ABC transporter oxd6D 1374151 - 1374948 + | ABC transporter ATPase TERM 1866 1375343 - 1375363 + G 71 -4.6 -4.5442 | TATTTCGATACTGCG CGCGCTTG ACCCA CGAACGCG TTTTCTGATTGCCGA SC1271 1374942 - 1375532 + | ABC transporter ATPase TERM 1867 1375573 - 1375598 + T 83 -13.3 -3.29043 | opp_overlap 1375575, overlap 1375561 1375575 GTGTCGCCGTTAACG CACCGGGAACC CATG GGTTCCCGGTA TTGTCGGCAGAGATT TERM 1868 1375596 - 1375575 - T 90 -15.9 -2.52464 | opp_overlap 1375573 1375561 1375575 GTCGCCGTTAACGCA CCGGGAACC CATG GGTTCCCGG TATTGTCGGCAGAGA TERM 1869 1375575 - 1375596 + T 100 -15.9 -3.21276 | opp_overlap 1375575, overlap 1375573 1375561 GTCGCCGTTAACGCA CCGGGAACC CATG GGTTCCCGG TATTGTCGGCAGAGA oxd6E 1376747 - 1375614 - | hypothetical protein TERM 1870 1376888 - 1376867 - H 83 -10.1 -4.02953 | opp_overlap 1376865, overlap 1376865 AAAGTATGAAAAAGA GGGGTAGCC GTTT GGCTATCCC GGCGTTTCTGTGCAG SC1273 1376941 - 1377267 + | hypothetical protein TERM 1871 1377386 - 1377368 - f 100 -11.7 -5.21709 | opp_overlap 1377374 1377378 GTTGATATCAAAAAA GGCCACC TGCGC GGTGGCC GCTGAGTTTCTGTTG TERM 1872 1377450 - 1377430 - f 87 -11.3 -4.00486 | opp_overlap 1377424 GTTATAATATAACAA TCATCTTTC TAA GAAAGATGA GGGTAACGTTTTGGT yodA 1377461 - 1378111 + | hypothetical protein TERM 1873 1378151 - 1378132 - f 73 -7.8 -4.19506 | opp_overlap 1378132 ATTGCAATGTTAAAA GCTCGCTA TGAA TAGCGGGC TTTTTTTCTGCCGTT TERM 1874 1378132 - 1378151 + F 100 -10 -5.63504 | opp_overlap 1378132 ATTGCAATGTTAAAA GCTCGCTA TGAA TAGCGGGC TTTTTTTCTGCCGTT aadA 1378220 - 1379008 + | aminoglycoside resistance protein TERM 1875 1379453 - 1379470 + G 77 -4.1 -5.02074 | CGTGAGTTACTGATT TTGGCCG CTGC TGGTCAA TTTTTTCCCAGGTCA SC1276 1379099 - 1379746 + | response regulator TERM 1876 1379889 - 1379930 + G 80 -4.3 -5.10461 | overlap 1379892 CAGGTCCTGGGAACG CTATGGCCTGCTTCAACCT ACCA AAGATGAAGCTGGCAATCG TTTTTATTGCATAGA ycgE 1379815 - 1380663 + | putative transcriptional regulator TERM 1877 1380710 - 1380685 - T 79 -11.1 -3.41693 | opp_overlap 1380685 1380688, overlap 1380688 TGCATTATTAACGAA CAGGGGAGGAG TAAC CCCCTCCCTTG TTTATACCCTTCATA TERM 1878 1380685 - 1380710 + T 87 -11.1 -3.93236 | opp_overlap 1380685 1380688, overlap 1380688 TGCATTATTAACGAA CAGGGGAGGAG TAAC CCCCTCCCTTG TTTATACCCTTCATA TERM 1879 1380688 - 1380707 + T 79 -9.2 -4.08948 | opp_overlap 1380685 1380688, overlap 1380685 ATTATTAACGAACAG GGGAGGAG TAAC CCCCTCCC TTGTTTATACCCTTC TERM 1880 1380707 - 1380688 - T 73 -11.4 -2.56164 | opp_overlap 1380688 1380685, overlap 1380685 ATTATTAACGAACAG GGGAGGAG TAAC CCCCTCCC TTGTTTATACCCTTC TERM 1881 1380807 - 1380829 + T 73 -11.4 -2.71144 | opp_overlap 1380803 1380811, overlap 1380811 GTCGCAAGCGACGTT CAAATCTGCT CCC GGCAGATTTG TCGTTCACCCCAGTC SC1278 1381166 - 1380918 - | hypothetical protein TERM 1882 1381304 - 1381271 - H 100 -9.1 -5.4756 | opp_overlap 1381271 AACTGTAATAAAAAA TCATAAAAATGTGAT GCTC ATCACATTTCTGTGA TTTGTTGTATATTTT TERM 1883 1381271 - 1381304 + H 86 -9.1 -4.5002 | opp_overlap 1381271 AACTGTAATAAAAAA TCATAAAAATGTGAT GCTC ATCACATTTCTGTGA TTTGTTGTATATTTT SC1279 1381482 - 1382027 + | chorismate mutase TERM 1884 1382339 - 1382325 - g 73 -5.6 -4.56597 | overlap 1382306 1382327 TTTTGTGCTTAAAAA CAGCGT GGG ACGCGG GGTTAAAGGAGGATA yeaS 1382224 - 1382862 + | leucine export protein LeuE TERM 1885 1382869 - 1382892 + F 77 -10.2 -3.35344 | opp_overlap 1382866, overlap 1382870 1382872 CAGTCTTAACCACCT GGACCCGTCG TCAA CGGCGGGTCA TTGCTCTCCTTTCGG TERM 1886 1382870 - 1382891 + F 83 -13.7 -2.60725 | opp_overlap 1382866, overlap 1382869 1382872 AGTCTTAACCACCTG GACCCGTCG TCAA CGGCGGGTC ATTGCTCTCCTTTCG TERM 1887 1382872 - 1382889 + F 72 -10.5 -2.83634 | opp_overlap 1382866, overlap 1382870 1382869 TCTTAACCACCTGGA CCCGTCG TCAA CGGCGGG TCATTGCTCTCCTTT yeaR 1383035 - 1383397 + | hypothetical protein yoaG 1383400 - 1383582 + | putative cytoplasmic protein TERM 1888 1383631 - 1383659 + F 100 -13.9 -4.74706 | opp_overlap 1383630 1383631 TTTTTAAATCAGAAG CCGCATCGCGC GTCGCCA GCGTGATGCGG TTTTTGCGTATTGAA TERM 1889 1383659 - 1383631 - f 76 -11.7 -2.75769 | opp_overlap 1383631, overlap 1383630 TTTTTAAATCAGAAG CCGCATCGCGC GTCGCCA GCGTGATGCGG TTTTTGCGTATTGAA nor 1383812 - 1384453 + | hypothetical protein TERM 1890 1384531 - 1384510 - f 100 -12.3 -5.52384 | gap 1 CGGTTAGCAAAAAAA GCCCGCACTC GGT GAG-GCGGGC AAATAATACTGGAAG SC1284 1384574 - 1384759 + | hypothetical protein yeaQ 1384767 - 1385015 + | hypothetical protein TERM 1891 1385064 - 1385034 - f 87 -14.3 -2.90219 | opp_overlap 1385037 1385041, overlap 1385037 1385041 CAGAACTTTCAGAGA TAATAAAGGCTAC GACAG GTAGCCTTTATTA TTCAAAATGAATTTA TERM 1892 1385037 - 1385061 + F 86 -11.6 -3.63694 | opp_overlap 1385034 1385037 1385041, overlap 1385041 AACTTTCAGAGATAA TAAAGGCTAC GACAG GTAGCCTTTA TTATTCAAAATGAAT TERM 1893 1385061 - 1385037 - f 86 -11.6 -3.5947 | opp_overlap 1385037 1385041, overlap 1385034 1385041 AACTTTCAGAGATAA TAAAGGCTAC GACAG GTAGCCTTTA TTATTCAAAATGAAT TERM 1894 1385057 - 1385041 - f 79 -8 -4.42974 | opp_overlap 1385037 1385041, overlap 1385037 1385034 TTCAGAGATAATAAA GGCTAC GACAG GTAGCC TTTATTATTCAAAAT TERM 1895 1385041 - 1385057 + F 79 -8 -4.45068 | opp_overlap 1385041 1385037 1385034, overlap 1385037 TTCAGAGATAATAAA GGCTAC GACAG GTAGCC TTTATTATTCAAAAT yaoF 1385448 - 1385699 + | putative hemolysin TERM 1896 1385942 - 1385930 - g 80 -10.5 -3.91716 | TTACTGCCGAAAGAA GCGCC TCG GGCGC TGTGGCTGGTCACGG SC1287 1385768 - 1386079 + | hypothetical protein yeaO 1386412 - 1386065 - | putative cytoplasmic protein yeaN 1387715 - 1386531 - | MFS family transporter TERM 1897 1388572 - 1388551 - g 100 -11.5 -5.03715 | opp_overlap 1388549 ACCATGTTTAAAAAA GGCCTGGGG CAGA CGCCAGGCC AGTATCTGACGGGCG yeaM 1387816 - 1388610 + | AraC family helix-turn-helix transcriptional regulator yeaL 1389036 - 1388590 - | hypothetical protein TERM 1898 1388681 - 1388713 + gF 86 -12 -3.60296 | gap 1, opp_overlap 1388659 ACGCCAAGTACCGTA CCGACCAGCAGCCCG GCGA CGAGCTGC-GGTTGG TTTCCCATCAGCGTA SC1292 1389023 - 1389175 + | hypothetical protein SC1293 1389206 - 1389343 + | putative inner membrane protein yeaK 1389867 - 1389340 - | hypothetical protein yeaJ 1391401 - 1389908 - | methyl-accepting chemotaxis protein TERM 1899 1391146 - 1391164 + g 80 -5.2 -4.85599 | opp_overlap 1391145 TAATAGCCTCAAAGG CGTCGC AAAACGC GCGGCG TTTTTCTGCGGTGAC TERM 1900 1392003 - 1392040 + r 84 -10.7 -3.95621 | opp_overlap 1392009, overlap 1392004 1392009 AATCGCCTTGTTAGT GATAAATCAGCCCGTGA CGCA TTACGGGCTGATTTAGG TTTATGCACTTTGAT TERM 1901 1392004 - 1392039 + r 85 -14.2 -2.9665 | opp_overlap 1392009, overlap 1392003 1392009 ATCGCCTTGTTAGTG ATAAATCAGCCCGTGA CGCA TTACGGGCTGATTTAG GTTTATGCACTTTGA TERM 1902 1392034 - 1392009 - R 95 -11.9 -3.91897 | opp_overlap 1392004 1392003 1392009 CTTGTTAGTGATAAA TCAGCCCGTGA CGCA TTACGGGCTGA TTTAGGTTTATGCAC TERM 1903 1392009 - 1392034 + r 100 -14.1 -3.89215 | opp_overlap 1392009, overlap 1392004 1392003 CTTGTTAGTGATAAA TCAGCCCGTGA CGCA TTACGGGCTGA TTTAGGTTTATGCAC yeaH 1393328 - 1392042 - | hypothetical protein TERM 1904 1392419 - 1392408 - G 71 -4.4 -4.63218 | CTCTTGCGAATAAAA GAAC TCAT GTTC GTCCACTTCCTTCGC TERM 1905 1392578 - 1392602 + g 77 -4.2 -4.88129 | gap 1, opp_overlap 1392550 1392578, overlap 1392580 TCAGACAGAACATCA CCGCCTG-GCT GGAG GGCTCAGGCCG TTTTTCATAATTTTT TERM 1906 1392894 - 1392906 + g 95 -3.3 -5.81032 | TTTATACTCGTTAAG CTGGC GAT GCTGG TTTTTTTTCAGATTA yeaG 1395415 - 1393451 - | hypothetical protein TERM 1907 1394422 - 1394435 + g 74 -4.5 -4.72127 | opp_overlap 1394418, overlap 1394418 CAATATAGACACGGT CGAGG AACG CTTCG TTATTTTTATTGTTA mipA 1395812 - 1396558 + | scaffolding protein for murein-synthesizing holoenzyme TERM 1908 1396617 - 1396581 - f 78 -6.6 -4.57341 | opp_overlap 1396591, overlap 1396585 1396591 AATTTGCCGGAAAAA CCATGACAAAGCCTGC GTTAT GCAGGCTTTGTGCTAA CTGAAACGCGAACAT TERM 1909 1396613 - 1396585 - f 76 -11.8 -2.53903 | opp_overlap 1396591, overlap 1396581 1396591 TGCCGGAAAAACCAT GACAAAGCCTGC GTTAT GCAGGCTTTGTG CTAACTGAAACGCGA TERM 1910 1396591 - 1396607 + F 80 -10.1 -3.97947 | opp_overlap 1396591 1396585 1396581 AAAAACCATGACAAA GCCTGCG TTA TGCAGGC TTTGTGCTAACTGAA TERM 1911 1396607 - 1396591 - f 79 -9.4 -4.06719 | opp_overlap 1396591, overlap 1396585 1396581 AAAAACCATGACAAA GCCTGC GTTAT GCAGGC TTTGTGCTAACTGAA TERM 1912 1397042 - 1397055 + G 74 -3.1 -4.85782 | gap 1 GCAGGGGGGAGAGCC GA-CGC TAT GCGGTC TTTCTTTTTACCACA chuR 1396848 - 1398044 + | arylsulfatase regulator yeaE 1398141 - 1398998 + | putative aldehyde reductase yeaD 1399981 - 1399097 - | putative enzyme related to aldose 1-epimerase SC1302 1400295 - 1399981 - | hypothetical protein TERM 1913 1400286 - 1400273 - G 100 -8.1 -5.95166 | opp_overlap 1400273 TTTAAGCAAAAAAAA GCGAC CTGA GTCGC TCTTACCAATGACTG gapA 1401318 - 1400314 - | glyceraldehyde-3-phosphate dehydrogenase TERM 1914 1401381 - 1401365 - H 72 -2.9 -5.09245 | GTAAAATTACAAAAA CCTTACG CAG CGTCAAG CGGAATCGTGTCAAT TERM 1915 1401884 - 1401898 + G 72 -2.1 -4.91511 | CAGCGAAGAGGCGAT TCGTT ACATA GACGA TTTTTCTCATGGAAT TERM 1916 1402013 - 1402025 + G 71 -6.2 -4.36914 | opp_overlap 1401988, overlap 1402011 CTATTGCGTTAACTC GGCC TCGCT GGCC TTTTCTGACGAGAAA yeaA 1401621 - 1402064 + | methionine sulfoxide reductase B yeaC 1402106 - 1402384 + | hypothetical protein TERM 1917 1402406 - 1402419 + T 80 -9.5 -3.91084 | opp_overlap 1402399 1402390 1402402 1402401 CCGGATAAGAGGTAG CCGCC ATCC GGCGG TTTCATTGCCAATGC SC1306 1403002 - 1402772 - | hypothetical protein TERM 1918 1403033 - 1403015 - H 70 -5.2 -4.46775 | overlap 1403017 CATCTAAAACAGAAA CACGCCAC AGA ATGGAGTG ACGAAAAAATAACCG ydjL 1403277 - 1404353 + | hypothetical protein TERM 1919 1404408 - 1404398 - g 95 -8.2 -4.90002 | opp_overlap 1404400, overlap 1404399 1404400 GAACAGATAACAAAA CCGC ACT GCGG CGCCCGGCTGGATCG ydjK 1404380 - 1405759 + | metabolite transport protein TERM 1920 1405781 - 1405771 - g 81 -4 -5.25906 | ATAAAGGAATAAAAA TGAA AAA TTCA AAAGCGATATTAAAA TERM 1921 1406053 - 1406066 + G 70 -9.5 -3.31726 | overlap 1406052 AGCCGGGCGTGCCGT GCGGC CACT GCCGC TATTGTCTGGAAGGA ydiJ 1405770 - 1406813 + | hypothetical protein ydjI 1406835 - 1407671 + | hypothetical protein TERM 1922 1408389 - 1408369 - gf 72 -6.2 -4.19974 | gap 1 AAAACTGGCAAGAAA GGCTGCTTT ATCA AAAGC-GCC GATATAAAAATGGAA ydjH 1407622 - 1408623 + | putative sugar kinase ydjH TERM 1923 1408865 - 1408855 - g 77 -4 -5.0133 | overlap 1408859 CAGGCGCTGAAAAAA TTAC CGC GTAA CGAGATGGTGGTAGA TERM 1924 1409041 - 1409058 + G 76 -3.3 -5.01732 | overlap 1409042 ATCTATATGACCCAC TGGCAGT CAGT ACCGCCG TTTTTTACGCCGATT ydjG 1408639 - 1409616 + | oxidoreductase ydjG ydjF 1409746 - 1410504 + | putative transcriptional regulator YdjF ydjE 1410640 - 1411998 + | metabolite transport protein pncA 1412757 - 1412134 - | nicotinamidase/pyrazinamidase ansA 1413872 - 1412784 - | cytoplasmic asparaginase I TERM 1925 1413081 - 1413095 + g 70 -7 -4.09685 | opp_overlap 1413081 1413079 GCCTACGCCATAAGA GCGCAG AAT CAGCGC TTTTACCGGCTGACG sppA 1415752 - 1413896 - | protease 4 TERM 1926 1415590 - 1415580 - G 71 -8.2 -3.80014 | opp_overlap 1415579 ATATCCAGCAGCAAA GCGC CGC GCGC CGTTTGCTCACTGTT TERM 1927 1416182 - 1416160 - g 86 -7.6 -4.69027 | opp_overlap 1416159 1416177, overlap 1416152 AAAGCGATCGAAAAA GCGCGTAATG CGC CGTTTCGCGC ACCGCTGATCATTAC ydjA 1415926 - 1416477 + | hypothetical protein TERM 1928 1416531 - 1416493 - f 70 -5.3 -4.42386 | gap 1, opp_overlap 1416490 CGCTGAGGGATAAAA CTGTCTGGATT-CTGAGC AAAG GCGCGGTAATTCAGACAG TGATACTTACCACAT TERM 1929 1416865 - 1416855 - gf 71 -6.8 -4.1552 | opp_overlap 1416855 1416854 1416858 CATTGCGGCAACAAA CGCT ATC AGCG ATATTTTTGCGATGG selD 1416595 - 1417638 + | selenophosphate synthetase TERM 1930 1418788 - 1418774 - gT 84 -2.8 -5.31275 | opp_overlap 1418779, overlap 1418776 TGGGATGACAAAAAA GTGG ATGCGCA CCAC GCGATTATCCCGACG TERM 1931 1419031 - 1419019 - gT 74 -6.9 -4.30576 | opp_overlap 1419022 GCGCGACGAGGAAAA CGACG GTA CGCCG CTGCCGGTTGTCGCC TERM 1932 1419547 - 1419525 - gT 74 -6.9 -4.24787 | gap 1, overlap 1419542 GAGACAAGAAAAAGA GCGCGC-CGC GTAA GCGAGCGGGC AAAAAAAGCCCGCCT TERM 1933 1419577 - 1419555 - gT 100 -7.6 -5.41143 | overlap 1419542 1419557 1419571 1419575 GAGCGGGCAAAAAAA GCCCGCCTGC TAA GGAGACAGGC CGTCAGACCGAATAA topB 1417586 - 1419592 + | DNA topoisomerase III TERM 1934 1419652 - 1419627 - T 76 -8.9 -3.75169 | opp_overlap 1419628, overlap 1419628 1419630 GACGACGGGATTAAA TGACGCCCTGC GCCA GCATGGCGTCG GCGACTTTCACGAAA TERM 1935 1419651 - 1419628 - T 79 -12.4 -2.8478 | opp_overlap 1419628, overlap 1419627 1419630 ACGACGGGATTAAAT GACGCCCTGC GCCA GCATGGCGTC GGCGACTTTCACGAA gdhA 1420965 - 1419622 - | glutamate dehydrogenase TERM 1936 1419838 - 1419855 + g 71 -9.8 -3.53012 | CCCCGATGTCGCCAC GCCGCC CGCGTT GGCGGC TTTACCCGGCGCAAA TERM 1937 1420726 - 1420750 + g 77 -4.9 -4.91109 | overlap 1420722 1420721 GTTGAACTGCACGCG CCAGGCGCG ATTTACC TGCACCTGG TTTTTGTCGTCCAGC TERM 1938 1420890 - 1420918 + g 73 -6 -4.44915 | gap 1 CTTCACGGACGGCTT GCGCGAACTCG GTTTGATG CGGGT-CGCGC TTTTGTACATGGTTG ynjH 1421204 - 1421479 + | putative periplasmic protein nudG 1421855 - 1421439 - | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase xthA 1422734 - 1421928 - | exonuclease III SC1325 1422869 - 1423048 + | hypothetical protein TERM 1939 1423221 - 1423244 + G 74 -4.4 -4.75472 | TTTTGATGAATGGAT GGTGCCGGTA TATG TTCCCGCGCC TTTTATTCCTGTACG argD 1423180 - 1424406 + | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 1940 1424959 - 1424971 + G 79 -3.3 -5.26316 | TTTTTTCTATGGATC TCAGC CGG GCGGA TTTTTTATGCGGTAC TERM 1941 1425209 - 1425249 + G 78 -11.7 -3.16881 | opp_overlap 1425192 ACCCGCTCGTTATCC GGCGCGCCAGAGCCGCG AAGCCAG CGAGGCCGTGGCGCGTC TTAATCAGGTGAATC astA 1424397 - 1425923 + | arginine succinyltransferase astE 1425916 - 1426884 + | succinylglutamate desuccinylase spy 1427220 - 1427705 + | periplasmic protein TERM 1942 1427725 - 1427773 + T 100 -11.7 -5.0065 | opp_overlap 1427723 1427725 CCGCATAATTTAAGA CCGCCGGTCTTGTCGACAACA CAATCGT TGAGGTGGACAGGATCGGCGG TTTTCTTTATGACTG cho 1428688 - 1427780 - | nucleotide excision repair endonuclease nadE 1429609 - 1428782 - | NAD synthetase osmE 1429828 - 1430169 + | DNA-binding transcriptional activator OsmE TERM 1943 1430201 - 1430216 + F 100 -7.5 -5.64274 | opp_overlap 1430201 GAACATTCAAGGAAA CCGGC CTGCGA GCCGG TTTTTTTGTGCCTGC TERM 1944 1430216 - 1430201 - f 74 -8.2 -3.95817 | opp_overlap 1430201 GAACATTCAAGGAAA CCGGCC TGCG AGCCGG TTTTTTTGTGCCTGC celA 1430470 - 1430790 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB TERM 1945 1430833 - 1430855 + F 72 -9.2 -3.64192 | opp_overlap 1430835, overlap 1430835 GTTATTTCATACACT AACCGCAATA TTT TATTGCGGTA TTTAAGGGTATTTTT TERM 1946 1430835 - 1430853 + F 82 -11.8 -3.38603 | opp_overlap 1430835, overlap 1430833 TATTTCATACACTAA CCGCAATA TTT TATTGCGG TATTTAAGGGTATTT TERM 1947 1430853 - 1430835 - f 82 -11.8 -3.32498 | opp_overlap 1430835 1430833 TATTTCATACACTAA CCGCAATA TTT TATTGCGG TATTTAAGGGTATTT TERM 1948 1431153 - 1431169 + G 85 -4.3 -5.252 | GCACATTGGGCATTA TGTCGCT CAT GGCGCCA TTTTTTATCGGCATG celB 1430873 - 1432231 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC celC 1432282 - 1432629 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA celD 1432640 - 1433482 + | DNA-binding transcriptional regulator ChbR TERM 1949 1433595 - 1433579 - f 70 -9.5 -3.10513 | ATAGCGTAATACATA TCAGTGT CAT ACACTGA AGGGAGATATTATGA celF 1433607 - 1434962 + | phospho-beta-glucosidase (cellobiose-6-phosphate hydrolase) celG 1434975 - 1435733 + | hypothetical protein TERM 1950 1435744 - 1435765 + T 100 -15.9 -5.1361 | overlap 1435746 TTTAGCTCCTGAGTT TGCGGCGCA GGAA TGCGCCGCA TTTTTTGCCGTTTAT katE 1438029 - 1435777 - | hydroperoxidase II TERM 1951 1437094 - 1437111 + g 74 -3.3 -4.88736 | opp_overlap 1437093, overlap 1437093 1437096 CCGGCGGTGAAAATC CGGATCG CGAC CGGTCAG TTTTTGTGACTCATC cedA 1438394 - 1438636 + | cell division modulator TERM 1952 1438675 - 1438645 - T 100 -9.8 -5.84381 | opp_overlap 1438650 TGACTAAGAAAAAAA CAAAACGCCGGT ACTGGAG ACCGGCGTTTTT AGTGACAGACATTTT TERM 1953 1438650 - 1438670 + T 93 -9.7 -4.72272 | opp_overlap 1438645 AAGAAAAAAACAAAA CGCCGGT ACTGGAG ACCGGCG TTTTTAGTGACAGAC ydjN 1440130 - 1438739 - | hypothetical protein TERM 1954 1439598 - 1439609 + g 75 -5.8 -4.65895 | TTTGCGCCAGTCAGA TCCG CAAA CGGA TTTTTCGGTACAAAA ydjM 1440854 - 1440267 - | hypothetical protein TERM 1955 1440646 - 1440665 + g 70 -9.2 -3.66095 | opp_overlap 1440636 GTAAACCCCCGGTGA CCGAACGC GCGG GCGATCGG TTTCGATACCCATTT TERM 1956 1440845 - 1440833 - G 86 -4.1 -5.36441 | TGGCTATAGAAAAAA GAAGA TGT CCTTC CGCCGTCATGATAAA yniC 1441672 - 1441004 - | 2-deoxyglucose-6-phosphatase TERM 1957 1441124 - 1441109 - G 72 -11.8 -2.64099 | opp_overlap 1441107 1441109, overlap 1441108 TGCTGGCACCACAAT GGCGCG CATT CGCGCC GCCTTTGCCGCGATT TERM 1958 1441230 - 1441243 + g 70 -3.1 -4.82901 | ACCTGCGGGTGCGGT TTGCT GTAG GGCAA TTTTTCTGCAGAAGC yniB 1441821 - 1442357 + | hypothetical protein TERM 1959 1442389 - 1442367 - T 100 -12.1 -4.81851 | ATGTAAACTGAAAAA TGCCGGATA GCCCG TATCCGGCA TGGGCTGTACCTATA yniA 1443260 - 1442400 - | hypothetical protein TERM 1960 1443084 - 1443109 + g 77 -8.3 -4.08144 | gap 1, opp_overlap 1443050 1443101, overlap 1443085 1443101 CAGCTCCAGCTGATC GGCTTCAGCGGT AAA ACCGC-GAAGCA TTTCTCGTTCATCGC TERM 1961 1443085 - 1443108 + g 76 -11.8 -3.04404 | gap 1, opp_overlap 1443050 1443101, overlap 1443084 1443101 AGCTCCAGCTGATCG GCTTCAGCGGT AAA ACCGC-GAAGC ATTTCTCGTTCATCG ydiZ 1443657 - 1443367 - | hypothetical protein TERM 1962 1443431 - 1443459 + g 86 -10.3 -4.10552 | opp_overlap 1443430 1443456 1443457 ACATCCTTATCTAAC GCGCTTTTCGC AAGTCCG GCGACAAGCGC TTTGATTTCATCAGC TERM 1963 1443567 - 1443557 - G 78 -2.4 -5.16237 | AATGTCAGCAAAAAA CCGC TAC GCGT CAGATGGTTATTGAG TERM 1964 1443708 - 1443693 - R 78 -11.8 -3.01791 | ACTGTGTTTTTAACA GCGGCG GATG CGCCGC CCGTTAACCGATTTT TERM 1965 1443725 - 1443753 + r 86 -11.7 -3.61398 | opp_overlap 1443720, overlap 1443726 CGTTAACCGATTTTC CGGTATCCCCCTC GCC GAGGGGGATACGA TTATTGCGCGGAAAG TERM 1966 1443726 - 1443752 + r 93 -15.2 -2.76696 | opp_overlap 1443720, overlap 1443725 GTTAACCGATTTTCC GGTATCCCCCTC GCC GAGGGGGATACG ATTATTGCGCGGAAA pfkB 1444686 - 1443754 - | 6-phosphofructokinase 2 TERM 1967 1444931 - 1444947 + H 89 -6.5 -5.32944 | CCTATGAAAGTTTCC GGGACCG TCG TGGTCTC TTTTTTAGTTGTACG TERM 1968 1445108 - 1445098 - g 82 -5.4 -5.03314 | opp_overlap 1445098 1445107 TCCACCGCGAAAAAA CCTT TTG AAGG TAATCTGAATGCGGG ydiY 1444975 - 1445733 + | putative salt-induced outer membrane protein TERM 1969 1445741 - 1445763 + T 100 -17.8 -3.69395 | opp_overlap 1445736 1445759 AGATGTAATATTGCG CCGGGTTACG TTA CGTAACCCGG TTATTCCGTGGTGAC SC1349 1446741 - 1445782 - | putative outer membrane protein TERM 1970 1446267 - 1446285 + g 80 -5.2 -4.84761 | overlap 1446269 1446270 AACGGTTTTCAATTT GATCCTGC CAG GCAGGGTA TTTTTCTGCGCCTAT TERM 1971 1446269 - 1446283 + g 71 -7.8 -4.04397 | overlap 1446267 1446270 CGGTTTTCAATTTGA TCCTGC CAG GCAGGG TATTTTTCTGCGCCT TERM 1972 1446819 - 1446790 - R 75 -10.1 -3.60798 | gap 1, opp_overlap 1446790 1446793, overlap 1446793 ATTTTTACAAAGTAA TAAGCACAGCCGCA TGA TGCG-CAGTGCTTA TTGAATCTTTAAATA TERM 1973 1446790 - 1446819 + r 71 -10.1 -3.24735 | gap 1, opp_overlap 1446790 1446793, overlap 1446793 ATTTTTACAAAGTAA TAAGCACAGCCGCA TGA TGCG-CAGTGCTTA TTGAATCTTTAAATA TERM 1974 1446816 - 1446793 - R 71 -7.4 -3.93401 | gap 1, opp_overlap 1446793 1446790, overlap 1446790 TTTACAAAGTAATAA GCACAGCCGCA TGA TGCG-CAGTGC TTATTGAATCTTTAA SC1350 1446976 - 1446881 - | hypothetical protein nucA 1447194 - 1448048 + | putative DNA/RNA non-specific endonuclease TERM 1975 1448160 - 1448177 + F 71 -7.1 -4.03978 | CATCGTCATGCCGGA CGAAAAT AGCG ATTTTCG TTTGTGTCGAAGGTT TERM 1976 1448594 - 1448609 + G 70 -3.2 -4.80882 | overlap 1448596 AAATGGCGATCGGCC CGGTTG TCGA CAACGG TTTTTACTATGACGT TERM 1977 1449237 - 1449227 - g 74 -2.4 -5.00616 | TGCTGTGGGAAAAAA CCGG GCA CTGG GACAACTATAAAGAT thrS 1448308 - 1450236 + | threonyl-tRNA synthetase infC 1450348 - 1450782 + | translation initiation factor IF-3 TERM 1978 1450826 - 1450799 - f 72 -8.4 -3.81146 | opp_overlap 1450800 1450801, overlap 1450800 GCCTTCAAGTAACAA TTCTGTGAAGCC TTCG GGCTTCACAGGT TTTGTTCGCCTATGT TERM 1979 1450800 - 1450825 + F 100 -14.1 -4.66987 | opp_overlap 1450800 1450799, overlap 1450801 CCTTCAAGTAACAAT TCTGTGAAGCC TTCG GGCTTCACAGG TTTTGTTCGCCTATG TERM 1980 1450825 - 1450800 - f 77 -11.9 -2.88366 | opp_overlap 1450800 1450801, overlap 1450799 CCTTCAAGTAACAAT TCTGTGAAGCC TTCG GGCTTCACAGG TTTTGTTCGCCTATG TERM 1981 1450801 - 1450824 + F 100 -15.4 -3.39469 | opp_overlap 1450800 1450799, overlap 1450800 CTTCAAGTAACAATT CTGTGAAGCC TTCG GGCTTCACAG GTTTTGTTCGCCTAT rpmI 1450878 - 1451075 + | 50S ribosomal protein L35 rplT 1451126 - 1451482 + | 50S ribosomal protein L20 TERM 1982 1451492 - 1451514 + F 88 -7.7 -4.99568 | opp_overlap 1451494, overlap 1451494 GCATAAGCCAGTGAA AAGAGGGAG GCTGG CTCCCTCTC TTTTATTTACTGTTC TERM 1983 1451512 - 1451494 - f 90 -10.3 -4.21676 | opp_overlap 1451494 1451492 ATAAGCCAGTGAAAA GAGGGAG GCTGG CTCCCTC TCTTTTATTTACTGT TERM 1984 1451494 - 1451512 + F 87 -10.3 -4.09862 | opp_overlap 1451494, overlap 1451492 ATAAGCCAGTGAAAA GAGGGAG GCTGG CTCCCTC TCTTTTATTTACTGT TERM 1985 1451690 - 1451720 + F 77 -12.1 -2.89564 | gap 1, opp_overlap 1451697, overlap 1451697 AAACGAAAAACAGCG CAAAAAA-GCCTCC TGAT GGAGGCTTTTTTTG TATCTGAAATCGAGA TERM 1986 1451712 - 1451697 - f 100 -10.4 -5.10077 | opp_overlap 1451697 1451690 AAACAGCGCAAAAAA GCCTCC TGAT GGAGGC TTTTTTTGTATCTGA TERM 1987 1451697 - 1451712 + F 100 -10.4 -5.76633 | opp_overlap 1451697, overlap 1451690 AAACAGCGCAAAAAA GCCTCC TGAT GGAGGC TTTTTTTGTATCTGA pheS 1451784 - 1452767 + | phenylalanyl-tRNA synthetase subunit alpha pheT 1452783 - 1455170 + | phenylalanyl-tRNA synthetase subunit beta ihfA 1455175 - 1455474 + | integration host factor subunit alpha TERM 1988 1455517 - 1455558 + F 77 -11.7 -2.88544 | opp_overlap 1455519 1455543, overlap 1455519 GTGTATTGCGGCAGA TACGCTGCCATCCCG AAAGTAGATCAG CGGGATGACAGCGTA TCTGTCAGCCTGAAA TERM 1989 1455519 - 1455556 + F 70 -9.9 -2.99471 | opp_overlap 1455519 1455543, overlap 1455517 GTATTGCGGCAGATA CGCTGCCATCCCG AAAGTAGATCAG CGGGATGACAGCG TATCTGTCAGCCTGA TERM 1990 1455556 - 1455519 - f 77 -12.1 -2.87564 | opp_overlap 1455517 1455519, overlap 1455543 GTATTGCGGCAGATA CGCTGCCATCCCG AAAGTAGATCAG CGGGATGACAGCG TATCTGTCAGCCTGA TERM 1991 1455615 - 1455589 - f 83 -13.8 -2.58861 | opp_overlap 1455595, overlap 1455595 GATGACCCGTATAAC TAAAAAGGCCGC ATT GCGGCCTTTTTT CTTTCAAGTAAAGGA TERM 1992 1455609 - 1455595 - f 100 -12.8 -4.93365 | opp_overlap 1455595, overlap 1455589 CCGTATAACTAAAAA GGCCGC ATT GCGGCC TTTTTTCTTTCAAGT TERM 1993 1455595 - 1455609 + F 100 -12.8 -5.64421 | opp_overlap 1455595 1455589 CCGTATAACTAAAAA GGCCGC ATT GCGGCC TTTTTTCTTTCAAGT btuC 1455677 - 1456657 + | vtamin B12-transporter permease btuE 1456749 - 1457300 + | putative glutathione peroxidase TERM 1994 1457295 - 1457284 - f 70 -2.2 -5.04325 | TGGAAAGCATAAAAA TCGC GTTG GCAA AATAATGTCTCAATT TERM 1995 1457693 - 1457717 + G 70 -10 -3.41527 | overlap 1457694 CTTTCCGGTGGCGAG TGGCAGCGAG TTCGC CTTGCTGCCG TTGTACTACAAATTC btuD 1457300 - 1458049 + | vitamin B12-transporter ATPase nlpC 1458126 - 1458590 + | lipoprotein TERM 1996 1458731 - 1458714 - f 80 -6.9 -4.72986 | opp_overlap 1458715, overlap 1458715 TACTTTTATTAAAAA CGGGCGT GTTC ACGCCCT GTTAAAAGTACAAGA TERM 1997 1458715 - 1458730 + F 73 -10.4 -3.04144 | opp_overlap 1458714 1458715 ACTTTTATTAAAAAC GGGCGT GTTC ACGCCC TGTTAAAAGTACAAG TERM 1998 1458730 - 1458715 - f 77 -10.4 -3.4331 | opp_overlap 1458715, overlap 1458714 ACTTTTATTAAAAAC GGGCGT GTTC ACGCCC TGTTAAAAGTACAAG TERM 1999 1458799 - 1458788 - f 71 -7.2 -4.04789 | AGTTAAAAAAAGGAA CCGG TTCA CCGG TAAACAAGAAAAATG ydiV 1458904 - 1459617 + | diguanylate cyclase/phosphodiesterase domain-containing protein TERM 2000 1460374 - 1460408 + G 84 -12.8 -3.35996 | opp_overlap 1460369 1460388, overlap 1460376 TACCGGAAGACTCAT CGCCGAGTGGCAAACC GTC GGTTTTTCGCACGGCG TTATGAATACGGATA TERM 2001 1460584 - 1460570 - g 70 -10 -3.41878 | overlap 1460567 CTGTGGAATTTACAA CGTCTG GCG CAGACG TTAACCCCTTTTATT ydiU 1459679 - 1461121 + | hypothetical protein TERM 2002 1461119 - 1461159 + T 95 -13.4 -3.91084 | gap 1, opp_overlap 1461121 GTCAGTTGTTCAAGT TAGC-CTGACGCCAGCAGA ATCG TCTGCTGGCGGGAGCGCTA TTTGGTTAACAGTAG TERM 2003 1461157 - 1461121 - T 76 -11.6 -2.52676 | gap 1, opp_overlap 1461119 CAGTTGTTCAAGTTA GC-CTGACGCCAGCAGA ATCG TCTGCTGGCGGGAGCGC TATTTGGTTAACAGT ydiE 1461348 - 1461157 - | hypothetical protein TERM 2004 1461499 - 1461477 - R 100 -15.6 -4.21631 | opp_overlap 1461474 AACGCATCGAAGAAA CGCCCATCCC GGC AGGATGGGCG AGCTATTAAAAGCGG TERM 2005 1461528 - 1461511 - R 79 -8.3 -4.2828 | opp_overlap 1461520 GGCGAGCTATTAAAA GCGGCTG TCTA CCGCCGC GGCAAGTTTTTCCAA aroH 1462551 - 1461505 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2006 1461725 - 1461735 + g 71 -4.6 -4.62471 | opp_overlap 1461714 CATACCTCCAGCTGG CGGC GAT GCTG TTTTTGACAGTTGCC ydiA 1463540 - 1462707 - | hypothetical protein TERM 2007 1465320 - 1465294 - g 83 -7.2 -4.62336 | ATTTCAGCGTAAAAA GCTCCAGCGTAG ACA CCATGCCAGAGC TACCGCTGAAGGTCA TERM 2008 1465717 - 1465735 + G 74 -7.4 -4.19746 | GCGCGGGTCGTTACG TCGCAGAA AGT TTCCGCGA TTGTTTTGCGCTGGA pps 1463877 - 1466255 + | phosphoenolpyruvate synthase TERM 2009 1466260 - 1466295 + T 100 -15.4 -3.86524 | opp_overlap 1466256 1466252, overlap 1466261 TGAAGAAGTAATGTG ATACCGGATGGCGGCG TTAA CGTCGCCATCCGGCAA TTTATACCGCGGTGT TERM 2010 1466261 - 1466294 + T 100 -18.9 -2.91593 | opp_overlap 1466256 1466252, overlap 1466260 GAAGAAGTAATGTGA TACCGGATGGCGGCG TTAA CGTCGCCATCCGGCA ATTTATACCGCGGTG ydiD 1467982 - 1466297 - | short chain acyl-CoA synthetase TERM 2011 1467984 - 1468014 + r 70 -9.1 -3.35046 | gap 1, opp_overlap 1467992 1467994, overlap 1467982 1467994 ATCTCTGGGGGCAAG CCGAATAA-GACGC CGTA GCGTCGTTATCCGG TGTTTCAGAGCGTCA TERM 2012 1468005 - 1467992 - R 72 -8.1 -3.68222 | opp_overlap 1467984 1467982 1467994, overlap 1467994 GGGCAAGCCGAATAA GACGC CGTA GCGTC GTTATCCGGTGTTTC ydiT 1468320 - 1468027 - | putative ferredoxin ydiS 1469603 - 1468317 - | hypothetical protein TERM 2013 1468529 - 1468542 + g 70 -3.1 -4.82901 | gap 1, overlap 1468529 1468530 GGAAATGCCGCATAT C-GCGT AAC ACGCCG TTTTTCTCCAGCGCG TERM 2014 1468713 - 1468691 - G 74 -7.6 -4.07868 | opp_overlap 1468695 1468697, overlap 1468693 1468694 CGAGATTCAGACAAA GACCGGCGGC GTC GCCGACAATC ATCACGCCGTCATTT ydiR 1470595 - 1469660 - | electron transfer flavoprotein subunit YdiR ydiQ 1471381 - 1470617 - | putative electron transfer flavoprotein YdiQ TERM 2015 1470780 - 1470790 + g 74 -2.4 -5.00616 | TCGCTCGCCAGCCAC GACG TAA CGGC TTTTTTCCCGGCGCC TERM 2016 1471860 - 1471880 + G 83 -7.5 -4.56597 | overlap 1471862 TGTATCAGCGCTGTT TTGACTCCG CCG CGGAGACGA TTTTTGAACAGGACA TERM 2017 1472121 - 1472137 + G 76 -2.9 -5.08255 | CGGCTACCACCTATA CCTGTGC GCT GTATGGG TTTTGTTTTCCAGGT ydiP 1471844 - 1472734 + | AraC family transcriptional regulator ydiO 1473961 - 1472810 - | putative acyl-CoA dehydrogenase ydiF 1475570 - 1473975 - | putative acetyl-CoA:acetoacetyl-CoA transferase beta subunit TERM 2018 1474233 - 1474244 + g 80 -4.4 -5.00616 | overlap 1474227 CGTAATTTCCGGCAG TTCG CTGA CGAA TTTTTTCACGCGACC aroD 1476483 - 1475725 - | 3-dehydroquinate dehydratase aroE 1477394 - 1476528 - | quinate/shikimate dehydrogenase ydiN 1478696 - 1477461 - | MFS family transporter TERM 2019 1478059 - 1478042 - G 74 -3.4 -4.88918 | overlap 1478043 CGACGCCAAATAAAA CGGAAG CTACGC CTTCCA GCCAGACGAGGGGAG TERM 2020 1478812 - 1478832 + r 72 -6.1 -4.26351 | opp_overlap 1478812 1478814 GTTATATGTACATAA CATGGCGTT TAA AATGCCAGG TTTATTGCATTGATA ydiM 1480271 - 1479060 - | MFS family transporter TERM 2021 1480123 - 1480100 - G 74 -4.6 -4.71426 | opp_overlap 1480087 CGGCGATTAACAAAA CGCTTAGT CGGCCAAT ACCAAGCG AAGAGATCACAATAG TERM 2022 1480254 - 1480239 - G 76 -9 -4.02762 | overlap 1480234 GTAATTAAAATACAA CCCTAC AGCG GTAGGG AAATAACGATTTTTC ydiL 1480771 - 1480412 - | putative cytoplasmic protein TERM 2023 1480817 - 1480796 - R 100 -9.5 -5.21709 | TTTTATATGAAAAAA GTGATGCTA TAAA TAGCACCAC CGACACCGTTTCGAC yis2 1481624 - 1480941 - | putative integrase protein TERM 2024 1480973 - 1481009 + g 100 -16.1 -3.54741 | opp_overlap 1480980, overlap 1480975 1480980 TGACAGTTTTTTGTC TGTAAAACGCCTGATGA ACA TCATCGGGCGTTTTGTA TTTCAGGGCCTGGTG TERM 2025 1480975 - 1481007 + g 100 -16.5 -3.35046 | opp_overlap 1480980, overlap 1480973 1480980 ACAGTTTTTTGTCTG TAAAACGCCTGATGA ACA TCATCGGGCGTTTTG TATTTCAGGGCCTGG TERM 2026 1480980 - 1481002 + g 100 -14.2 -4.78848 | opp_overlap 1480980, overlap 1480975 1480973 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG TERM 2027 1481002 - 1480980 - G 91 -12 -4.07568 | opp_overlap 1480975 1480973 1480980 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG SC1383 1482196 - 1481795 - | putative cytoplasmic protein TERM 2028 1482282 - 1482263 - R 100 -7.1 -5.89947 | CAAAGTTAAAAAAAA GCCCATC GTAGGA GACGGGC AAAGACTACACACAG TERM 2029 1482540 - 1482514 - R 100 -15.8 -3.56862 | opp_overlap 1482513 1482512, overlap 1482504 1482515 1482517 ATAAACGTCGCTAAA GCATCGGGCGGC AAT GCCGCCCGACGG GATTATGACTGCTTG TERM 2030 1482539 - 1482515 - R 100 -19.3 -2.73635 | opp_overlap 1482513 1482512, overlap 1482514 1482504 1482517 TAAACGTCGCTAAAG CATCGGGCGGC AAT GCCGCCCGACG GGATTATGACTGCTT TERM 2031 1482537 - 1482517 - R 100 -18.3 -2.90992 | opp_overlap 1482513 1482512, overlap 1482515 1482514 1482504 AACGTCGCTAAAGCA TCGGGCGGC AAT GCCGCCCGA CGGGATTATGACTGC ydiK 1483661 - 1482543 - | putative inner membrane protein TERM 2032 1484331 - 1484344 + G 81 -2.3 -5.40072 | CTTAATCAGGCGTTA AAGCC GTAT GGCTA TTTTTTTGCGCCGGA TERM 2033 1485516 - 1485501 - g 80 -4.6 -5.07652 | CTGCGCAAAATAAAA GCGGCT TTTG ATCCGC ATAATCGACTTAACC TERM 2034 1486172 - 1486161 - g 76 -3 -5.01732 | AATCTGGCGAAAAAA CATA TCGG TATG GTGGATTTACCTCTG ydiJ 1483926 - 1486982 + | paral putative oxidase ydiI 1486979 - 1487389 + | hypothetical protein ydiH 1487449 - 1487676 + | hypothetical protein TERM 2035 1487907 - 1487937 + T 100 -12.7 -5.45802 | CGGATGGGGCCGGAA CCCTTAAGCCTGT ATTGA ACAGACTTAAGGG TTTTTCTTTTCCGGG ydjN 1489310 - 1487964 - | putative Na+-dicarboxylate symporter sufA 1489737 - 1490105 + | iron-sulfur cluster assembly scaffold protein sufB 1490114 - 1491601 + | cysteine desulfurase activator complex subunit SufB TERM 2036 1491769 - 1491739 - gf 71 -6.9 -4.07687 | gap 2, overlap 1491740 1491742 ACGGTTCCGGGAAAA GCACGCTCTCCGCCA CTC TGGCGG-GA-CGTGA AGATTATGAGGTCAC TERM 2037 1491768 - 1491740 - gf 73 -10.4 -3.04398 | gap 2, overlap 1491739 1491742 CGGTTCCGGGAAAAG CACGCTCTCCGCCA CTC TGGCGG-GA-CGTG AAGATTATGAGGTCA TERM 2038 1491938 - 1491956 + GF 72 -10.2 -2.76456 | opp_overlap 1491920, overlap 1491936 1491954 GCTGAATGCCGTGCG CGCCTACC GCG GGCAGGCG TCGTTGGATCGCTTT sufC 1491618 - 1492364 + | cysteine desulfurase ATPase component TERM 2039 1493233 - 1493215 - gf 75 -6.6 -4.46073 | CTGGAACATAACAAA GGCTACTG TAA CAGCCGCC AGTTGCACAAGACCA TERM 2040 1493593 - 1493562 - gf 77 -10.8 -3.34715 | gap 1, opp_overlap 1493581, overlap 1493560 TAGCGCCCTTAAACA GCAGGTGCTGGCGCG AAT CG-GCCAGCGACTGC CCGGAGGCCTGGTAT sufD 1492339 - 1493610 + | cysteine desulfurase activator complex subunit SufD TERM 2041 1493649 - 1493628 - g 72 -3.7 -4.82901 | TTTCCTGTAGAAAAA GTACGGG CGGATTTT CCCATAC TGCAGCGTGAAGTTA TERM 2042 1494235 - 1494259 + G 77 -4.9 -4.89729 | overlap 1494237 TGATGCACCATGTTG TTGACGTCCAG GCG CTGGACTGCGA TTTTTACGTTTTCTC TERM 2043 1494400 - 1494424 + G 74 -7.8 -4.07568 | gap 1, opp_overlap 1494400 GCCTGACGCAGGGAA CGACATGGGCG AAAG CGCCC-TGGCG TTTTGAGGCGGGAAC sufS 1493607 - 1494827 + | selenocysteine lyase TERM 2044 1495183 - 1495165 - g 74 -2.3 -5.0133 | overlap 1495166 CATGGTTCGAAAAAA TGGCGCT TGCGC AGCACCT CACACCTTCTCGTTC ynhA 1494840 - 1495256 + | cysteine desufuration protein SufE ynhG 1495411 - 1496412 + | LysM domain-containing protein TERM 2045 1496435 - 1496463 + T 87 -14.7 -2.80935 | opp_overlap 1496440, overlap 1496440 GCAAACGACGGACAA AAAAATGGCGCAC GAT GTGCGCCATTTTA TATCGTGCGTCAAAT TERM 2046 1496458 - 1496440 - T 100 -14.6 -5.64274 | opp_overlap 1496435 1496440 CGACGGACAAAAAAA TGGCGCAC GAT GTGCGCCA TTTTATATCGTGCGT TERM 2047 1496440 - 1496458 + T 100 -14.6 -4.57755 | opp_overlap 1496440, overlap 1496435 CGACGGACAAAAAAA TGGCGCAC GAT GTGCGCCA TTTTATATCGTGCGT lppB 1496717 - 1496478 - | putative methyl-accepting chemotaxis protein TERM 2048 1496778 - 1496760 - R 100 -14.6 -4.41616 | opp_overlap 1496760 ATTCGGGTAAAGAAA TGGCGCAC GAT GTGCGCCA TTTTATATCGTGCGT TERM 2049 1496760 - 1496778 + r 100 -14.6 -4.57755 | opp_overlap 1496760 ATTCGGGTAAAGAAA TGGCGCAC GAT GTGCGCCA TTTTATATCGTGCGT lppB 1497040 - 1496798 - | putative methyl-accepting chemotaxis protein TERM 2050 1497067 - 1497119 + r 100 -17.3 -2.54574 | opp_overlap 1497084, overlap 1497069 1497084 1497112 TATACTTTGTGTGGT TATGTGGGTAAAAAAAATGGCGCAC GAT GTGCGCCATTTTTATTACGCAGGTA CTATTACTTACGGTA TERM 2051 1497069 - 1497117 + r 93 -15.5 -2.80699 | opp_overlap 1497084, overlap 1497067 1497084 1497112 TACTTTGTGTGGTTA TGTGGGTAAAAAAAATGGCGCAC GAT GTGCGCCATTTTTATTACGCAGG TACTATTACTTACGG TERM 2052 1497102 - 1497084 - R 100 -14.6 -5.75342 | opp_overlap 1497069 1497067 1497084 TGTGGGTAAAAAAAA TGGCGCAC GAT GTGCGCCA TTTTTATTACGCAGG TERM 2053 1497084 - 1497102 + r 100 -14.6 -5.06414 | opp_overlap 1497084, overlap 1497069 1497067 TGTGGGTAAAAAAAA TGGCGCAC GAT GTGCGCCA TTTTTATTACGCAGG lpp 1497359 - 1497123 - | murein lipoprotein, links outer and inner membranes TERM 2054 1497539 - 1497512 - R 72 -2.6 -5.03747 | AAAGTCCCTAAAAAA CCGAAAGAAAAC AGGG GGCTTCCATCGG ATTCTTCTTAGATAA TERM 2055 1497645 - 1497615 - R 86 -11.3 -3.76224 | opp_overlap 1497623, overlap 1497623 TGGCTATCGATTAAA TAAAAAAAGCGCC GGAAG GGCGCTTTTTTAA ACAAATTAATTCACA TERM 2056 1497637 - 1497623 - R 100 -8.5 -5.99154 | opp_overlap 1497623, overlap 1497615 GATTAAATAAAAAAA GCGCC GGAAG GGCGC TTTTTTAAACAAATT TERM 2057 1497623 - 1497637 + r 91 -8.5 -5.01732 | opp_overlap 1497615 1497623 GATTAAATAAAAAAA GCGCC GGAAG GGCGC TTTTTTAAACAAATT pykF 1499082 - 1497670 - | pyruvate kinase TERM 2058 1498196 - 1498222 + g 72 -3.6 -4.77036 | overlap 1498177 1498206 GCGTTCGCAACGTCG CCTGCTTCTG CGCGGGT CGGACGCGGG TTTTTGATCATAGAA TERM 2059 1499417 - 1499465 + r 71 -10.4 -2.63549 | gap 3, overlap 1499416 1499453 ACGCTGTTTACGATG TCGCTG--GCGATGACGCCGCCC GAACAG GGGCGGCGTTG-CGCAACAGCGG GTGTTGTTGCGCATA TERM 2060 1499453 - 1499478 + r 83 -14.1 -2.64616 | overlap 1499417 1499416 GAACAGGGGCGGCGT TGCGCAACAGC GGGT GTTGTTGCGCA TAATGTCAATCGAGC ycjj 1500827 - 1499484 - | putative amino acid permease pip 1501742 - 1500849 - | putative hydrolase or acyltransferase TERM 2061 1501848 - 1501824 - R 79 -9.4 -4.08216 | opp_overlap 1501826 TTATTGTGTGTAAAA CATTACACCA GAAGG TGGCGTAATG TTCCCATTGCAGAAA SC1402 1502538 - 1501801 - | putative cytoplasmic protein rbsk 1503776 - 1502550 - | DeoR family transcriptional regulator ttrA 1507161 - 1504099 - | tetrathionate reductase complex, subunit A TERM 2062 1505057 - 1505085 + g 70 -8.7 -3.76224 | opp_overlap 1505024 1505064 CGGCGAGTGGCGGGG GCGACAACCGGCC AGC GGGCGGTAGTGGC TTTACTGGCTACGCC TERM 2063 1505401 - 1505414 + g 75 -6.7 -4.39828 | overlap 1505405 GGCTGGATAAGGGGA TTGCC CGCC GGCAA TTTTGTCGCGGTATT ttrC 1508176 - 1507154 - | tetrathionate reductase complex, subunit C TERM 2064 1507661 - 1507649 - G 70 -9.1 -3.63991 | CATCAGCGCGAAGAA CGCCT GTA AGGCG CTAAGAAACATCGCC TERM 2065 1507791 - 1507803 + g 78 -6.3 -4.69053 | AACGCCAACCATTTA GTTAC GTT GTAAC TTTTATTGAATAATC ttrB 1508911 - 1508177 - | tetrathionate reductase complex, subunit B TERM 2066 1508506 - 1508521 + g 71 -6 -4.30719 | opp_overlap 1508489 1508502 1508505 CCTGTACACAATAGG CGCAGC CGAC GCAGCG TTTGTTATCCACCAC TERM 2067 1508695 - 1508706 + g 74 -7.2 -4.21922 | opp_overlap 1508693 1508694 CCGTCGTACGAAACG CGCC TTGC GGCG TTTGGTTTTCAATAG ttrS 1509093 - 1510871 + | tetrathionate reductase complex: sensory transduction histidine kinase TERM 2068 1511176 - 1511152 - gf 87 -8.5 -4.57073 | overlap 1511167 1511168 GATTTTCTGCAAAAA CCGGTATCGGT AAA ACCGCTACAGG CGGCGCTGGAGCGTG TERM 2069 1511440 - 1511423 - gf 91 -7.7 -5.00616 | GGCGTTTCGAAAAAA TGGCCTC GCCA GAGACCA GAATACGAACAACGT ttrR 1510846 - 1511466 + | tetrathionate reductase complex: response regulator TERM 2070 1511487 - 1511502 + F 78 -4.8 -4.99947 | AAACTGCGTTATTTC TTTGAT TTGC ATCAAA TTTTGTTTAATTGAG SC1409 1511513 - 1511776 + | hypothetical protein SC1410 1512831 - 1511872 - | putative inner membrane protein SC1411 1513731 - 1513003 - | MerR family regulatory protein ssrB 1514548 - 1513910 - | secretion system transcriptonal activator ssrA 1517341 - 1514579 - | secretion system regulator:sensor component TERM 2071 1516168 - 1516180 + g 93 -4.7 -5.66868 | TTTTACGTTTGTTAG CTCGC TCA GCGCG TTTTTTTGCTTCATT TERM 2072 1516952 - 1516938 - G 77 -4.2 -4.92757 | opp_overlap 1516938, overlap 1516930 TGATTAAGAATAAAA CTATCG CGA CGAAAG CTTTTTTCATCGATA ssaB 1517742 - 1518143 + | secretion system apparatus SsaB ssaC 1518145 - 1519638 + | secretion system apparatus SsaC TERM 2073 1520653 - 1520665 + G 73 -9.1 -3.86897 | overlap 1520654 CAAGTATCTGCCTGC GCCAG TGG CTGGC TTTGTACAGAGTCGC ssaD 1519619 - 1520830 + | secretion system apparatus SsaD ssaE 1520838 - 1521080 + | secretion system effector SsaE sseA 1521289 - 1521615 + | secretion system effector SseA sseB 1521622 - 1522212 + | secretion system effector SseB TERM 2074 1522365 - 1522377 + G 74 -4.7 -4.7629 | opp_overlap 1522360 GTAAAAGAATTCGCC GGCGC AGC GCGAC TTTTTCAATTGCTGA SC1420 1522209 - 1522682 + | secretion system chaparone SscA TERM 2075 1522698 - 1522686 - g 74 -4.9 -4.69664 | GACAGGAGCTAAAAA TGAAT CGA ATTCA CAGTAATAGCGACAG sseC 1522685 - 1524139 + | secretion system effector SseC sseD 1524155 - 1524742 + | secretion system effector SseD sseE 1524745 - 1525161 + | secretion system effector SseE SC1424 1525213 - 1525647 + | secretion system chaparone SscB TERM 2076 1525680 - 1525657 - f 77 -9 -3.90464 | opp_overlap 1525662, overlap 1525652 1525662 GCTTAAATAACAGAA CGAAATATGA AAAT TCATATTCCG TCAGCGGCAAGTAAT sseF 1525663 - 1526445 + | secretion system effector SseF TERM 2077 1526828 - 1526838 + G 85 -2.4 -5.49569 | GGCTCACGACAGTAT AGGC AAT GCCG TTTTTTATATTGCTA sseG 1526442 - 1527131 + | secretion system effector SseG ssaG 1527174 - 1527440 + | secretion system apparatus SsaG ssaH 1527418 - 1527708 + | secretion system apparatus SsaH ssaI 1527720 - 1527968 + | secretion system apparatus SsaI ssaJ 1527965 - 1528714 + | secretion system apparatus SsaJ TERM 2078 1529139 - 1529129 - g 70 -6.8 -4.21631 | overlap 1529120 AAGTGATGCAACAAA CTGC ATT GCAG ATCGGTACCGCCATT SC1431 1528732 - 1529280 + | putative cytoplasmic protein ssaK 1529277 - 1529951 + | secretion system apparatus SsaK ssaL 1529917 - 1530933 + | secretion system apparatus SsaL ssaM 1530991 - 1531359 + | secretion system apparatus SsaM TERM 2079 1532174 - 1532160 - g 82 -11.4 -3.85698 | overlap 1532168 GTTCCGGGTGAGAAA CGCCAG AAC CTGGCG ACAGAGTTGAGTTCT TERM 2080 1532458 - 1532468 + G 90 -5.4 -5.27938 | TTCGTGATATTGACG CCAT GAG ATGG TTTTTATTTGAGGAT ssaV 1531344 - 1533389 + | secretion system apparatus protein SsaV ssaN 1533379 - 1534680 + | type III secretion system ATPase TERM 2081 1534839 - 1534861 + GF 79 -7.8 -4.46854 | AAAGAATTAATGGGC TGGCAAGGTA CGT TATCTTGTCA TTTATTGTTGGATAA ssaO 1534629 - 1535060 + | secretion system apparatus SsaO ssaP 1535041 - 1535415 + | secretion system apparatus SsaP ssaQ 1535396 - 1536364 + | type III secretion system protein ssaR 1536432 - 1537079 + | type III secretion system protein ssaS 1537076 - 1537342 + | secretion system apparatus SsaS ssaT 1537343 - 1538122 + | secretion system apparatus SsaT TERM 2082 1539045 - 1539060 + G 71 -4.7 -4.63089 | CGTTGTTGAAAATGT TGAGC TGGCCC GCTCA TTATTTTTTGAAGTG ssaU 1538119 - 1539177 + | secretion system apparatus protein SsaU TERM 2083 1539641 - 1539622 - T 90 -10 -4.39828 | opp_overlap 1539624 1539631 1539633 AACATGTCGAGAAAA TAGCCGCC ATGC GACGGCTA TCGTCGTATTATCGC ydhE 1541023 - 1539650 - | multidrug efflux protein TERM 2084 1540335 - 1540348 + g 74 -3.1 -4.86621 | ATGACGACGCTATCA GGTTT GCCA AAGCC TTTTTCATTACGAAT TERM 2085 1540638 - 1540600 - G 100 -10.2 -4.88918 | overlap 1540602 CTACCTGAAAGAAAA GGTATCCTGGCGCGCCCC ACA GCAGCGCGCGAAGATAAC CCACGGCTTTATCGG TERM 2086 1540864 - 1540852 - G 77 -4.8 -4.93877 | CGTGACCAAACAAAA TGGC GGGAA GCCA GATAGAGGTGCCGAT TERM 2087 1541081 - 1541065 - H 85 -7.2 -4.946 | overlap 1541056 ATGAAAGACTAAAAA GCCGCC GTAGT GGCAGC CAAAAGAAATAGCAG TERM 2088 1541199 - 1541213 + H 79 -4.2 -5.18866 | TCCACCTGCTATTGT GCTGAA CAG TTCTGC TTTTATTTATTTCAG ribE 1541240 - 1541881 + | riboflavin synthase subunit alpha TERM 2089 1541925 - 1541889 - T 74 -6.8 -4.27316 | gap 2, opp_overlap 1541893, overlap 1541892 1541894 1541895 TTGGCTAACGGAAAA TAA-GAT-TCCCCCGCAT GAA ATGCGGGGGAGATGATTA GCGAGGAACGCGCAG TERM 2090 1541921 - 1541892 - T 87 -10.1 -4.25859 | gap 1, opp_overlap 1541893, overlap 1541889 1541894 1541895 GCTAACGGAAAATAA GAT-TCCCCCGCAT GAA ATGCGGGGGAGATG ATTAGCGAGGAACGC TERM 2091 1541893 - 1541919 + T 81 -13 -2.70932 | opp_overlap 1541892 1541889 1541894 1541895 CTAACGGAAAATAAG ATTCCCCCGCAT GAA ATGCGGGGGAGA TGATTAGCGAGGAAC TERM 2092 1541918 - 1541894 - T 100 -14.3 -3.72228 | opp_overlap 1541893, overlap 1541892 1541889 1541895 TAACGGAAAATAAGA TTCCCCCGCAT GAA ATGCGGGGGAG ATGATTAGCGAGGAA TERM 2093 1541917 - 1541895 - T 100 -17.8 -2.82253 | opp_overlap 1541893, overlap 1541894 1541892 1541889 AACGGAAAATAAGAT TCCCCCGCAT GAA ATGCGGGGGA GATGATTAGCGAGGA cfa 1543071 - 1541923 - | cyclopropane fatty acyl phospholipid synthase ydhC 1544566 - 1543361 - | inner membrane transport protein YdhC TERM 2094 1543761 - 1543774 + g 70 -3.1 -4.82901 | AGCCACGGAAGCAAT TGGTA GCCC TGCCA TTTTTGTAGCGCCGC TERM 2095 1544266 - 1544289 + g 73 -8.8 -3.85698 | gap 1, opp_overlap 1544246 1544245 1544264 CGGCCTGCACGAAGC GCAGCGTCAGC AGT GCTGCCGC-GC TTTCTACCCACAGCA TERM 2096 1544432 - 1544420 - G 70 -3.3 -4.69027 | opp_overlap 1544428, overlap 1544408 AAAGCCAGCTAAAAA CAGGC TGA GGCTG GCGCTGACCGCGGCG TERM 2097 1544849 - 1544870 + G 75 -5.7 -4.56597 | opp_overlap 1544854, overlap 1544850 1544852 TCACCGTGATGTTGA ACTGACGCC TGCT GGCGTCTGG TTTTTAAAAGAAGGG TERM 2098 1544852 - 1544867 + G 71 -10.4 -3.23708 | opp_overlap 1544854, overlap 1544850 1544849 CCGTGATGTTGAACT GACGCC TGCT GGCGTC TGGTTTTTAAAAGAA ydhB 1544679 - 1545611 + | putative DNA-binding transcriptional regulator purR 1546633 - 1545608 - | DNA-binding transcriptional repressor PurR TERM 2099 1546529 - 1546539 + g 77 -8.2 -4.15044 | overlap 1546536 AATTGCCGCCCAGAC CGCG TTA CGCG TTTCTTCAGCGACAA TERM 2100 1546536 - 1546560 + g 81 -7.1 -4.79174 | overlap 1546529 1546552 GCCCAGACCGCGTTA CGCGTTTCTTC AGC GACAAAACGCG TTTTGTTGATTACGT TERM 2101 1547091 - 1547070 - R 100 -14.5 -4.07885 | opp_overlap 1547063 1547062 TATCCCTCTCTAAAA CGCAGAAGG CGTA CCTTCTGCG TACTCAGACTTATGC sodB 1547682 - 1547101 - | superoxide dismutase TERM 2102 1547776 - 1547806 + r 70 -9.8 -3.05066 | opp_overlap 1547777 1547778 TGGCGCAAAAGAAGA AGTTATCCTGTCGT TAA ACGACAGGATAAAA TATTAGCGAATTGTT TERM 2103 1547805 - 1547777 - R 95 -13.3 -4.20868 | opp_overlap 1547776, overlap 1547778 GGCGCAAAAGAAGAA GTTATCCTGTCGT TAA ACGACAGGATAAA ATATTAGCGAATTGT TERM 2104 1547804 - 1547778 - R 100 -16.8 -3.11798 | opp_overlap 1547776, overlap 1547777 GCGCAAAAGAAGAAG TTATCCTGTCGT TAA ACGACAGGATAA AATATTAGCGAATTG ydhO 1548663 - 1547809 - | putative cell wall-associated hydrolase TERM 2105 1548194 - 1548207 + g 74 -2.3 -5.09245 | ATGAGTTTGGACATC GCGGT TTTC GTCGC TTTTTGTACTTTTGC TERM 2106 1548784 - 1548770 - H 100 -4.3 -5.83822 | CAGATGTAAAAAAAA TAGCA ATTAA TGCTA AACACGAACGCGTTA TERM 2107 1549007 - 1548988 - g 91 -7.9 -5.1101 | CCACTATCGAAAAAA TTCAGCG CCAGAT CGCTGAA AACCCGATTCTCCTG ydhD 1548966 - 1549313 + | hypothetical protein TERM 2108 1549330 - 1549347 + T 100 -11.3 -5.06451 | opp_overlap 1549330 CTGTGCAAGGGGAAA GCGACCT GTAA AGGTCGC TTTTTTACCGTCATC TERM 2109 1549347 - 1549330 - T 86 -11.3 -3.66178 | opp_overlap 1549330 CTGTGCAAGGGGAAA GCGACCT GTAA AGGTCGC TTTTTTACCGTCATC rnt 1550038 - 1549391 - | ribonuclease T TERM 2110 1549470 - 1549460 - G 75 -6.8 -4.40804 | overlap 1549465 GACGATTTCACAAAA CAGC ACC GCTG TCCGCTCGGTATCAT TERM 2111 1550015 - 1550001 - G 75 -7.1 -4.45077 | TAAAAACCACGAAAA CGGTC GCACA GACCG GAAAGTTGAGCGTTA TERM 2112 1550133 - 1550106 - R 100 -14.8 -4.2828 | opp_overlap 1550120, overlap 1550109 CGGGATGCAGTAAAA CAACGGGCGCAG TGAC CTGCGCCCGGCG GGGGATCAGTTACCC TERM 2113 1550130 - 1550109 - R 100 -17.3 -4.26327 | opp_overlap 1550120, overlap 1550106 GATGCAGTAAAACAA CGGGCGCAG TGAC CTGCGCCCG GCGGGGGATCAGTTA gloA 1550546 - 1550139 - | glyoxalase I nemA 1551712 - 1550615 - | N-ethylmaleimide reductase TERM 2114 1551784 - 1551765 - R 89 -6.4 -5.41941 | TAAAGGAAATAAAAA CGCCTG TTACTGCT CAGGCG TTGCAATGATGGTCT ydhM 1552307 - 1551771 - | TetR/AcrR family transcriptional regulator TERM 2115 1552335 - 1552313 - H 73 -7.6 -4.03234 | opp_overlap 1552313, overlap 1552314 CCCGTTGCATACAAA GCTGCTCGCC GGT GGCCAGCAGA TGTTCGCGGGTATCA TERM 2116 1552334 - 1552314 - H 75 -11.1 -3.01726 | opp_overlap 1552313, overlap 1552313 CCGTTGCATACAAAG CTGCTCGCC GGT GGCCAGCAG ATGTTCGCGGGTATC ydhL 1552473 - 1552712 + | putative oxidoreductase TERM 2117 1553121 - 1553110 - g 85 -4.4 -5.17353 | opp_overlap 1553110 ACAGTCATTAAAAAA TCTG GCGA CAGA TTATCTGGATATGTT TERM 2118 1553219 - 1553231 + G 80 -9.1 -4.208 | opp_overlap 1553208 1553209 1553217 CAAAGCGGCAAAGTG CGCCA TTT TGGCG TTTCTAATTTTACGC ydhF 1552763 - 1553659 + | putative aldo/keto reductase sodC 1553739 - 1554260 + | superoxide dismutase ydhK 1556274 - 1554253 - | hypothetical protein TERM 2119 1554958 - 1554948 - G 76 -5.4 -4.77757 | GCGGAAAAAGGAAAA GCAA GAA TTGC CACAGATCGGTGATT ydhJ 1557176 - 1556274 - | putative multidrug resistance efflux pump TERM 2120 1556372 - 1556396 + g 80 -10.7 -3.83026 | CCGGTACGCGTTGCG CCAGACGTACC CAC GGTACGTTGGG TTTGATATCGGGCAC slyA 1557574 - 1558008 + | transcriptional regulator SlyA slyB 1558520 - 1558056 - | putative outer membrane lipoprotein anmK 1558792 - 1559913 + | anhydro-N-acetylmuramic acid kinase ydhA 1560001 - 1560330 + | lysozyme inhibitor pdxH 1560389 - 1561045 + | pyridoxamine 5'-phosphate oxidase TERM 2121 1561756 - 1561736 - g 74 -7.5 -4.15044 | GCTTGTCTGAATAAA CTGCACGGC GTT GCCTTACAG ATTGGCGGTTCTGAC TERM 2122 1562062 - 1562047 - g 81 -3.9 -5.21506 | overlap 1562049 1562057 AGAAGAAGATAAAAA CAGCG GTAAAG CGCCG CGCGCGCAGTATGTG TERM 2123 1562269 - 1562237 - g 72 -4 -4.81249 | overlap 1562238 GTTGAAATGGAAAAA GGCGCCGACCTG ATGCAGGCG CTGGTAGACGCC GAACTCCAGCCGTCG tyrS 1561172 - 1562446 + | tyrosyl-tRNA synthetase TERM 2124 1562458 - 1562483 + F 80 -6.1 -4.87626 | opp_overlap 1562459 1562461, overlap 1562461 ATAAGGCATTAAGTA ACAGGGAGTGA GAAA TCACTCCCTTA TTTTTGATGTTCAGG TERM 2125 1562482 - 1562459 - f 73 -9.6 -3.41581 | opp_overlap 1562458 1562461, overlap 1562461 TAAGGCATTAAGTAA CAGGGAGTGA GAAA TCACTCCCTT ATTTTTGATGTTCAG TERM 2126 1562461 - 1562480 + F 100 -12.2 -4.53398 | opp_overlap 1562461 1562459, overlap 1562458 AGGCATTAAGTAACA GGGAGTGA GAAA TCACTCCC TTATTTTTGATGTTC TERM 2127 1562480 - 1562461 - f 81 -12.2 -3.27297 | opp_overlap 1562458 1562461, overlap 1562459 AGGCATTAAGTAACA GGGAGTGA GAAA TCACTCCC TTATTTTTGATGTTC pdxY 1562506 - 1563366 + | pyridoxamine kinase gst 1564030 - 1563425 - | glutathionine S-transferase TERM 2128 1564112 - 1564090 - R 100 -13.5 -6.17184 | opp_overlap 1564086 ACGAGCAAAAAAAAA GCCGCTAAC GTACA GTTAGCGGC CTGAATGTTGTTTCC TERM 2129 1564147 - 1564158 + r 74 -5.8 -4.59109 | AAATTAAACTGTAGC GGCT TTAG AGCC TTTTTCAGCGGTATC tppB 1565640 - 1564135 - | putative tripeptide transporter permease TERM 2130 1565588 - 1565615 + g 77 -8.6 -4.07772 | gap 1, opp_overlap 1565575 1565572 1565594 1565603, overlap 1565581 1565589 1565599 AACGCCTTCGGTTGT TTGAAAGCGTTCA AAC TGA-CGCTTTCAG TTGGTTTTTTGTTTG TERM 2131 1565599 - 1565619 + g 91 -4 -5.64421 | opp_overlap 1565594 1565603, overlap 1565581 1565589 1565588 TTGTTTGAAAGCGTT CAAACTGA CGCTT TCAGTTGG TTTTTTGTTTGCAGT nth 1566876 - 1566241 - | endonuclease III TERM 2132 1566893 - 1566932 + r 93 -10.7 -4.54301 | gap 1, overlap 1566895 AGACTTTCCCTGTTT CACC-TGCCGGAACTGCG GAAGG CGCGGTTTCGGCGCGGCG TTTCTTCATTTTTTC TERM 2133 1566895 - 1566930 + r 76 -11.9 -2.55644 | gap 1, overlap 1566893 ACTTTCCCTGTTTCA CC-TGCCGGAACTGCG GAAGG CGCGGTTTCGGCGCGG CGTTTCTTCATTTTT ydgQ 1567568 - 1566876 - | SoxR-reducing system protein RsxE ydgP 1568191 - 1567571 - | electron transport complex protein RnfG rnfD 1569253 - 1568195 - | electron transport complex protein RnfD TERM 2134 1568502 - 1568483 - G 74 -11.4 -3.2352 | gap 1, overlap 1568478 GAAAAGCCAACCTAA CGC-GGCGC ATA GCGCCAGCG TGAGCAGAAAACTGA TERM 2135 1569156 - 1569143 - G 90 -5.9 -5.26875 | overlap 1569146 TCCCCAACCAAAAAA CCACG TCTG CGCGG CAATCCCCGGCAGAG TERM 2136 1569274 - 1569286 + r 86 -4.7 -5.47218 | CCTCGTTAACAACCT GCTGC TGT GCTGC TTTTTTTGCCTGAAC rnfC 1571368 - 1569254 - | electron transport complex protein RnfC TERM 2137 1569993 - 1570015 + g 76 -3.2 -5.06816 | TGACGAGCCTCAAAA CGCGCTTTGG CTT CGGCGGCGCG TTTTTCTTCAAGCCT TERM 2138 1571209 - 1571224 + g 70 -6.8 -4.08767 | CGCACAGCTCGCCCT CAGCGC CAAT GTGCTG TTTTAAGGGGATAAC rnfB 1571939 - 1571361 - | electron transport complex protein RnfB rnfA 1572520 - 1571939 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2139 1572043 - 1572024 - G 71 -6.3 -4.30576 | overlap 1572026 GCGTTACCACGAAAA GGGGCGG GCACAT CCGCCAC GGCAAGGCGTTCGCG TERM 2140 1572105 - 1572093 - G 77 -4.7 -4.90869 | overlap 1572094 ATCACTAATGAAAAA CCGAC GGC GGCGG AAAATCCGTACAGCG ydgK 1573037 - 1572597 - | hypothetical protein ydgT 1573410 - 1573126 - | oriC-binding nucleoid-associated protein TERM 2141 1573432 - 1573405 - G 95 -6.2 -5.3472 | AAAAAATAAACAAAA CCGCACCAGTGA GAGG TCAGGGGTGCAG GTAAAAAGGAAATAT TERM 2142 1574343 - 1574357 + r 80 -5.6 -5.03314 | opp_overlap 1574344, overlap 1574344 CGTCTTCCACAACCG ACGCTG GGA CAGCGA TTTTTTGACGCTGAA TERM 2143 1574344 - 1574356 + r 72 -9.1 -3.61506 | opp_overlap 1574344, overlap 1574343 GTCTTCCACAACCGA CGCTG GGA CAGCG ATTTTTTGACGCTGA TERM 2144 1574855 - 1574874 + r 71 -10 -3.21593 | opp_overlap 1574868, overlap 1574854 AGAACTGGCTTACGT TGCCGGGT AACT ATCCGGCA TATTATGCCGCCATC TERM 2145 1575107 - 1575119 + r 72 -4.7 -4.60041 | overlap 1575105 CCGCGGCCACTTTTT CGCGC AGC GCACG TTTTTCGCCATCGCT add 1576100 - 1575087 - | adenosine deaminase TERM 2146 1575577 - 1575601 + g 78 -6.5 -4.64844 | gap 1 GGAAAGCCCAGCTCA TCACCG-GCT AAATCC AGCGCGGTGA TTTTCTCTCTGTGCG TERM 2147 1575963 - 1575973 + g 70 -6.8 -4.07568 | opp_overlap 1575962, overlap 1575953 GACATGCGGAATCAG CGCT TCC AGCG TTTTGGCGGGAAGGG TERM 2148 1576227 - 1576251 + r 77 -11.4 -3.15013 | overlap 1576226 1576223 1576244 TCATTCTCTTTAACG CGCCCCCG GTCAGCTCA CGGGGGCG TCTCTGTTATCGCCT malY 1576700 - 1576305 - | MalY protein malI 1576710 - 1577300 + | maltose regulon regulatory protein malI ydgA 1578866 - 1577358 - | hypothetical protein TERM 2149 1578911 - 1578890 - R 100 -13 -4.38116 | overlap 1578904 TCCATAAAAATGAAA CCAGGCGG ATTAAA CCGCCTGG AGGAGTTTTACGTCT manA 1580048 - 1578969 - | mannose-6-phosphate isomerase TERM 2150 1579911 - 1579899 - G 74 -6.9 -4.33928 | TACTTTAAACAGAAA CGGCA GTT CGCCG AAACGGTTGGCTACC TERM 2151 1579930 - 1579945 + g 77 -3.9 -5.093 | overlap 1579931 CGGTTGGCTACCACT TCGCC CAGCAT GGCGG TTTTATTCTTTTCGA TERM 2152 1580602 - 1580589 - g 70 -6.7 -4.1899 | GCAGGCCAGTGAAAA CGACA AATA TGTCG CGCTGCAATTCCTGC fumA 1580344 - 1581990 + | fumarase A (fumarate hydratase class I), aerobic isozyme TERM 2153 1581991 - 1582016 + F 74 -11.1 -2.81509 | opp_overlap 1581991, overlap 1581988 1581982 CGCTGCGTTAAGTAA TGTCGCCGCCC TGCG GGGCGGTAACA TGATTCGCTATTTTG TERM 2154 1582016 - 1581991 - f 79 -11.1 -3.33696 | opp_overlap 1581991 1581988 1581982 CGCTGCGTTAAGTAA TGTCGCCGCCC TGCG GGGCGGTAACA TGATTCGCTATTTTG TERM 2155 1583475 - 1583451 - g 77 -8.5 -4.07535 | overlap 1583452 1583466 AAGGCGCATAAAGAA GGGCTGACGCT AAA AGCCTCAGCCG TGGCATTAGGATACC TERM 2156 1583474 - 1583452 - g 76 -12 -3.03798 | overlap 1583451 1583466 AGGCGCATAAAGAAG GGCTGACGCT AAA AGCCTCAGCC GTGGCATTAGGATAC fumC 1582158 - 1583561 + | fumarate hydratase tus 1584487 - 1583558 - | DNA replication terminus site-binding protein TERM 2157 1583594 - 1583614 + g 71 -11.1 -2.90813 | opp_overlap 1583594 1583593 1583596, overlap 1583570 1583596 CAGTCGCGGAATAAT CAGTCGCAG CGG CTGCGCCTG TGGTTTAAAACGGTG TERM 2158 1583891 - 1583910 + g 100 -7 -5.44119 | overlap 1583870 1583871 CGTCCACGGCGGGAC GCTGCGCG GCGA CGCGAGGC TTTTTTTCAACTGGC TERM 2159 1584282 - 1584261 - G 71 -4.4 -4.67607 | opp_overlap 1584271 TGTTGAATAAACAAA TGGCGATA GTGACG TAGCGCCA GCGTTTCGGCCTCTT rstB 1585864 - 1584563 - | sensor protein RstB TERM 2160 1585942 - 1585893 - R 93 -14.4 -3.37761 | opp_overlap 1585894 1585895, overlap 1585894 ATCTCAATACATTAA CTCTATC-GCGGCGCTGACGGAAA AGAT TTCCCGTCAGCGCCGCTGGT-GGG TTATAAAAGCAGGCT TERM 2161 1585942 - 1585894 - R 86 -14.6 -2.62175 | gap 1, opp_overlap 1585894 1585895, overlap 1585893 TCTCAATACATTAAC TCTATC-GCGGCGCTGACGGAAA AGAT TTCCCGTCAGCGCCGCTGGTGGG TTATAAAAGCAGGCT TERM 2162 1585894 - 1585942 + r 100 -19 -3.28791 | gap 1, opp_overlap 1585893 1585894, overlap 1585895 TCTCAATACATTAAC TCTATC-GCGGCGCTGACGGAAA AGAT TTCCCGTCAGCGCCGCTGGTGGG TTATAAAAGCAGGCT TERM 2163 1585895 - 1585941 + r 100 -20.3 -2.57132 | gap 1, opp_overlap 1585893 1585894, overlap 1585894 CTCAATACATTAACT CTATC-GCGGCGCTGACGGAAA AGAT TTCCCGTCAGCGCCGCTGGTGG GTTATAAAAGCAGGC SC1489 1587676 - 1585976 - | putative periplasmic protein TERM 2164 1587813 - 1587795 - R 100 -17.4 -5.45813 | GATGAAAAAAGAAAA GCCCGCCG AAA CGGCGGGC TTGAGAAGAATTAAT ompN 1588968 - 1587835 - | outer membrane protein N, non-specific porin SC1491 1589025 - 1589270 + | hypothetical protein SC1492 1589409 - 1589233 - | hypothetical protein rstA 1590179 - 1589448 - | DNA-binding transcriptional regulator RstA ydgC 1590306 - 1590641 + | hypothetical protein TERM 2165 1590660 - 1590699 + T 81 -12.4 -3.28712 | overlap 1590661 TGGCAAAGACCGTGG TTTCCCCATCGTAATA CAGACGGA TATTACGATGGGGAGG TTGTCAACCCACCAG TERM 2166 1590661 - 1590698 + T 83 -13.7 -2.57132 | overlap 1590660 GGCAAAGACCGTGGT TTCCCCATCGTAATA CAGACGGA TATTACGATGGGGAG GTTGTCAACCCACCA ydgI 1592085 - 1590703 - | putative amino acid transporter TERM 2167 1591389 - 1591404 + g 75 -3.9 -4.89063 | CTGCCAGTAGCGTTG CGCGG CCTACA TCGCG TTTATTTTTCGCTCG ydgH 1593328 - 1592384 - | hypothetical protein TERM 2168 1592786 - 1592803 + g 70 -7 -4.09117 | opp_overlap 1592769, overlap 1592769 1592766 GTCCGGGCTCTGGAC GATGCG TTTTTT CGCATC TTGTTTATAGATAAA TERM 2169 1593128 - 1593142 + g 71 -7.8 -4.03234 | opp_overlap 1593128 GTCGACAACATAGAA GGAGGC TGC GCCTTC TTTATCTGCGCGGCG pntA 1593855 - 1595384 + | NAD(P) transhydrogenase subunit alpha TERM 2170 1596404 - 1596391 - g 72 -3.7 -4.72386 | opp_overlap 1596398 GAAATCACCGAAAAA CTGCG TGCG CGCGG TATCAACGTGCGTTT pntB 1595395 - 1596783 + | pyridine nucleotide transhydrogenase TERM 2171 1596800 - 1596817 + F 100 -12.7 -4.87786 | CTTTTAAACGTGCGG CGGCCTC TTCG GAGGCCG TTTTTATAAACTTCA SC1499 1598127 - 1598297 + | hypothetical protein ydgF 1598409 - 1598771 + | multidrug efflux system protein MdtJ ydgE 1598758 - 1599087 + | multidrug efflux system protein MdtI TERM 2172 1599118 - 1599093 - T 86 -14.8 -2.62263 | opp_overlap 1599085 ATTTGCCTGAGACGA TCGCTGCCTG TCGGTT CAGGCAGCGA TTCCCGCATTAATCC ydgD 1599948 - 1599127 - | putative protease TERM 2173 1600202 - 1600184 - R 84 -8.1 -4.57569 | gap 1, opp_overlap 1600186, overlap 1600172 1600185 1600186 TTAGCGCCGTAAAAA CGGGCGCG GGGG CGCGCC-G CAGCATGTTACGATT TERM 2174 1600201 - 1600186 - R 76 -11.8 -2.60211 | opp_overlap 1600186, overlap 1600172 1600184 1600185 AGCGCCGTAAAAACG GGCGCG GGGG CGCGCC GCAGCATGTTACGAT asr 1600465 - 1600217 - | acid shock protein precursor TERM 2175 1600816 - 1600852 + r 89 -9.4 -4.65263 | opp_overlap 1600815 1600818, overlap 1600819 1600820 GTCGTGGCGTGAAAC CAGCCCGGCGATAGCG CATGT TGCTATCGCCGGATTA TTTCTTTTCAGGCGT TERM 2176 1600850 - 1600818 - R 74 -11.3 -2.90496 | opp_overlap 1600816 1600819 1600820, overlap 1600815 CGTGGCGTGAAACCA GCCCGGCGATAGC GCATGTT GCTATCGCCGGAT TATTTCTTTTCAGGC TERM 2177 1600819 - 1600849 + r 100 -13.3 -4.43397 | opp_overlap 1600818 1600815, overlap 1600816 1600820 GTGGCGTGAAACCAG CCCGGCGATAGCG CATGT TGCTATCGCCGGA TTATTTCTTTTCAGG TERM 2178 1600820 - 1600848 + r 100 -16.8 -3.24954 | opp_overlap 1600818 1600815, overlap 1600819 1600816 TGGCGTGAAACCAGC CCGGCGATAGCG CATGT TGCTATCGCCGG ATTATTTCTTTTCAG ynfM 1602113 - 1600860 - | putative MFS familty transport protein TERM 2179 1601393 - 1601374 - G 78 -2.1 -5.1861 | gap 1, overlap 1601375 1601387 1601388 1601390 CCCATCAGTAAAAAA CCTTCCGC AAACA GCAGA-GG CAACCCCCGATCGCG TERM 2180 1602498 - 1602466 - g 100 -17.7 -3.54424 | overlap 1602467 CCTGAGTCTGGTAAA CGACGCCGCCGCTCG CGC CGAGCGGCTGCATCA GGGCGAAGCGGGAGA TERM 2181 1602497 - 1602467 - g 100 -19 -2.72511 | overlap 1602466 CTGAGTCTGGTAAAC GACGCCGCCGCTCG CGC CGAGCGGCTGCATC AGGGCGAAGCGGGAG TERM 2182 1602556 - 1602568 + G 71 -6.3 -4.28254 | GCCTTTTATTCGGGC GGTAT CGC ATACC TTTTCGCTGTTCCGC TERM 2183 1602799 - 1602817 + G 83 -7.4 -4.66163 | opp_overlap 1602775 CAGTCTGACAGAACT GGCGGAAG AAC CTTTCGTC TTTTTCGATCCGCAT ynfL 1602233 - 1603132 + | LysR family transcriptional regulator TERM 2184 1603487 - 1603458 - g 74 -8.5 -4.06502 | gap 1, overlap 1603460 GAGCTTGAAATTAAA GA-GGCGGGCAGTC GTG GACGTCCCGCCGTC GGGCTGATGGTGGAA TERM 2185 1603484 - 1603460 - g 79 -11.3 -3.62354 | overlap 1603458 GCTTGAAATTAAAGA GGCGGGCAGTC GTG GACGTCCCGCC GTCGGGCTGATGGTG mlc 1603260 - 1604480 + | ptsG and ptsHI transcriptional repressor bioD 1604605 - 1605300 + | putative dithiobiotin synthetase TERM 2186 1605341 - 1605371 + T 75 -9.7 -3.56092 | opp_overlap 1605344, overlap 1605342 1605344 ACACAGGCAATCAGC AGACCGGGGAGTA ACTGA TACTCGCCGGTCA TTTCACAAATCATCA TERM 2187 1605342 - 1605370 + T 81 -13.2 -2.73441 | opp_overlap 1605344, overlap 1605341 1605344 CACAGGCAATCAGCA GACCGGGGAGTA ACTGA TACTCGCCGGTC ATTTCACAAATCATC TERM 2188 1605573 - 1605593 + T 71 -6.8 -4.07568 | GCGCGCCAGACCCGC TGCTGGCG AGCAC CGCCAGGA TTTTGCACACAAAAA TERM 2189 1606331 - 1606319 - T 72 -10.5 -2.77862 | overlap 1606312 1606314 1606316 CACAGTAACAGACCA GCGGC CAG GCCGC CAAGCGCTGGCGTAA TERM 2190 1606619 - 1606609 - T 74 -6.8 -4.2349 | GCGTCAGACGCAAAA GCAC TAT GTGC GATATAATATTGCGT opbA 1607829 - 1606681 - | ABC-type proline/glycine betaine transport systems, ATPase component TERM 2191 1607191 - 1607211 + g 80 -8.9 -4.15106 | opp_overlap 1607193 TCGCCCCTGACGGAA CACGGCGAT ACG GTCGCCGAG TTTTAGCGCTTCGTC TERM 2192 1607474 - 1607493 + g 82 -11.4 -3.85698 | TCCATCAACTCTTCG GCGCGTTG CTTG CAGCGCGC TTTGTCCCAACCCAA opcB 1608476 - 1607829 - | putative binding-protein-dependent transport system, inner membrane component TERM 2193 1608217 - 1608203 - G 86 -7 -5.03405 | overlap 1608205 AAGAGTAGAGAAAAA CGGCCG TCA CGGCGG GCAGAACGCCAATAC opcC 1609388 - 1608486 - | putative periplasmic component, ABC transport system TERM 2194 1608947 - 1608973 + g 70 -8.8 -3.65542 | overlap 1608945 1608950 GGACCTGTTCGATTT TTGCCACCATTT GCG AGATGGTGGTGA TATTTTCCGACTCGG yehW 1610127 - 1609417 - | ABC-type transport systems, permease components TERM 2195 1609943 - 1609932 - G 71 -5.8 -4.25104 | overlap 1609933 GTCGGCTGAGTAAAA TCCC GCTC GGGA TACCGACCAGTAAAG TERM 2196 1610354 - 1610366 + r 84 -7.7 -4.87665 | AAACAGAAACGTAGT GTGAC GTT GTCAC TTTTTGTAGATAAAA TERM 2197 1610403 - 1610420 + r 81 -8.4 -4.4017 | opp_overlap 1610403 CGCAATGGGAGAAAA GGCAGG TAAAAT CCTGCC TTTTGTGGGGATTAA TERM 2198 1610420 - 1610403 - R 81 -8.4 -4.42788 | opp_overlap 1610403 CGCAATGGGAGAAAA GGCAGG TAAAAT CCTGCC TTTTGTGGGGATTAA ynfI 1611046 - 1610432 - | twin-argninine leader-binding protein DmsD TERM 2199 1610657 - 1610681 + g 70 -2.8 -4.75309 | opp_overlap 1610639 1610657, overlap 1610647 1610662 CGCCAGCAGCAACAG CGACCCAAAA TGATC TTCTGGCTCG TTTTGTTGCATTTCA TERM 2200 1611009 - 1610987 - G 72 -2.6 -4.89477 | overlap 1610990 CGGCGAATAATAAAA CAACGCGC CAAGAAC ACGCGCCG TTACTGCAAAATCAT TERM 2201 1611082 - 1611063 - R 72 -9.2 -3.6512 | opp_overlap 1611062, overlap 1611056 1611055 1611064 CAAACAATCCCGAAA GGTGCGGG TCGC CCCGCACG CATAAATTAACCTGC TERM 2202 1611081 - 1611064 - R 79 -12.7 -2.78349 | opp_overlap 1611062, overlap 1611056 1611055 1611063 AAACAATCCCGAAAG GTGCGGG TCGC CCCGCAC GCATAAATTAACCTG ynfH 1611946 - 1611089 - | putative dimethylsulfoxide reductase TERM 2203 1611815 - 1611803 - G 95 -5.5 -5.38047 | CAGCCACAGAAAAAA CATGC TAC GCACG ATGCGCTGACGGGCG dmsB 1612370 - 1611948 - | anaerobic dimethyl sulfoxide reductase, subunit B ynfF 1615013 - 1612578 - | putative dimethyl sulphoxide reductase TERM 2204 1612732 - 1612760 + g 74 -7.3 -4.08767 | CCCTGGCCGATAGCG GTGACGCCAGGCA ATA TGCGCGGCGTGAC TTTTGCCAGAATGAG TERM 2205 1613149 - 1613162 + g 93 -4.5 -5.45652 | CGGAAAGCGACGTAG TGCTC CTCC GGGCA TTTTTTCTTGAAACT ynfE 1617553 - 1615112 - | putative dimethyl sulphoxide reductase, chain A1 TERM 2206 1615352 - 1615363 + g 83 -7.2 -4.59773 | opp_overlap 1615333 AACCTTATCGCCATT CGCG ATAC CGCG TTTTTGCGCATCGAG TERM 2207 1617086 - 1617104 + g 73 -5.3 -4.59773 | gap 1, opp_overlap 1617076, overlap 1617087 ATAAACGGCTTCATT G-CCGTAG GTCT CTACGGTC TTTTTCAGGCTGGCG TERM 2208 1617087 - 1617102 + g 73 -9 -3.91506 | opp_overlap 1617076, overlap 1617086 TAAACGGCTTCATTG CCGTAG GTCT CTACGG TCTTTTTCAGGCTGG ynfD 1618015 - 1617707 - | putative outer membrane protein ynfC 1618119 - 1618829 + | hypothetical protein TERM 2209 1618856 - 1618883 + T 71 -10.5 -2.73771 | opp_overlap 1618831 1618832, overlap 1618835 1618860 1618864 TGCGACTCTCCGTGA CTACCGCGCCG CGCTTA CTGCGCGGTGG GTTTCAGGAGTGTAG TERM 2210 1618860 - 1618884 + T 79 -10.6 -3.56643 | opp_overlap 1618831 1618832, overlap 1618835 1618856 1618864 ACTCTCCGTGACTAC CGCGCCGCGC TTACT GCGCGGTGGG TTTCAGGAGTGTAGA TERM 2211 1618864 - 1618880 + T 71 -10.8 -2.64472 | opp_overlap 1618831 1618832, overlap 1618835 1618856 1618860 TCCGTGACTACCGCG CCGCGC TTACT GCGCGG TGGGTTTCAGGAGTG speG 1619430 - 1618870 - | spermidine N1-acetyltransferase TERM 2212 1619119 - 1619139 + g 77 -8.1 -4.21908 | ATCCATCGCCAGTTT GGCCGCGCG TGA CGCCAGGCC TTTTCCCTGGTACTC TERM 2213 1619238 - 1619280 + g 76 -9.4 -3.96624 | overlap 1619223 CGGCGTTTTCACCGT CGCATTCGACGA-CAAAGCG CCGTT CGCTTTGGTCGT-GGATGTG TTTGTCGTAGAGATC ynfB 1619807 - 1619466 - | hypothetical protein ynfA 1619950 - 1620285 + | hypothetical protein TERM 2214 1620293 - 1620325 + F 84 -8.3 -4.67755 | GTACGTAACATTGCC GCGCGACCAGAACAT TTT GTGATCTGGCAGCGC TTTTTACATCAATAT TERM 2215 1620939 - 1620929 - g 81 -8.2 -4.3739 | overlap 1620931 GAGCCCGCGACAAAA GGCC AGT GGCC GGAAGAACAATTGTG rspA 1620407 - 1621621 + | putative dehydratase, starvation sensing protein rspB 1621632 - 1622651 + | putative dehydrogenase TERM 2216 1622885 - 1622926 + G 72 -2.1 -4.91852 | opp_overlap 1622909, overlap 1622866 1622884 CTTATTCTGGCAATG GGCACCTATGGTGCAGGTT ATAT AGCCAGAATTATCGGCGCC TTTGTTTTTGGTAAA TERM 2217 1624087 - 1624141 + G 100 -12.4 -4.9448 | gap 3, overlap 1624090 CAGACGAGTTAAATC GTG-TC-GACGGTATGGCCGGAA-CGC TAAT GCGGTTTCGGCCATGCTGTCCGGTCAC TTTTGTTTAATCAGT TERM 2218 1624090 - 1624137 + G 79 -12.9 -2.8949 | gap 2, overlap 1624087 ACGAGTTAAATCGTG TC-GACGGTATGGCCGGAA-CGC TAAT GCGGTTTCGGCCATGCTGTCCGG TCACTTTTGTTTAAT ydfJ 1622705 - 1624216 + | putative membrane transport protein ydfI 1624227 - 1625693 + | putative mannitol dehydrogenase TERM 2219 1625729 - 1625703 - T 73 -10.8 -3.10901 | opp_overlap 1625718, overlap 1625701 1625705 AAATAGCGTAACAGA GACCCGGTAGCA TTA TGCTACCGGGAA GGCCGGAGCGGTTCT TERM 2220 1625727 - 1625705 - T 100 -17.8 -3.10513 | opp_overlap 1625718, overlap 1625703 1625701 ATAGCGTAACAGAGA CCCGGTAGCA TTA TGCTACCGGG AAGGCCGGAGCGGTT ydfZ 1626026 - 1625760 - | hypothetical protein ydfH 1626830 - 1626144 - | GntR family transcriptional regulator ydfG 1627706 - 1626960 - | 3-hydroxy acid dehydrogenase dcp 1627845 - 1629887 + | dipeptidyl carboxypeptidase II yciF 1630482 - 1630285 - | hypothetical protein TERM 2221 1630387 - 1630369 - Gg 76 -3 -5.03145 | overlap 1630370 1630382 1630383 GAAGCGGGTAAAAAA GGCGGCCA GAA TAGCCACA GTGGCGGACGGAAAT yciG 1630180 - 1630413 + | putative cytoplasmic protein TERM 2222 1630463 - 1630481 + gT 100 -12.4 -5.88565 | opp_overlap 1630460 1630463 ATATTGCACATACGA TGCGGGCC ATA GGCTCGCA TTTTTTTATTCTGAC TERM 2223 1630481 - 1630463 - GT 71 -10.2 -2.69977 | opp_overlap 1630463, overlap 1630460 ATATTGCACATACGA TGCGGGCC ATA GGCTCGCA TTTTTTTATTCTGAC ydeJ 1631060 - 1630533 - | competence damage-inducible protein A TERM 2224 1631589 - 1631568 - g 85 -2.1 -5.52384 | opp_overlap 1631583, overlap 1631571 GGGGGATTAAAAAAA GACGTGGCA CCGC CGCCGCCTC ATGCTATTGAGGATG ydeI 1631487 - 1631879 + | hypothetical protein TERM 2225 1632121 - 1632138 + T 100 -10.5 -6.38039 | opp_overlap 1632117 CCATGCAAGCATTTA CCGCTGG TGAA CCGGCGG TTTTTTTTTTGCCTG TERM 2226 1632202 - 1632168 - T 100 -16.5 -4.55287 | gap 1, opp_overlap 1632157 1632156, overlap 1632169 GCCATCCAGACAAAA GCGGCCCCTTGC-GCA ACGA TGCAGCAAGGGGCCGG CTCTGCGAGGGATTA TERM 2227 1632201 - 1632169 - T 100 -20 -3.3269 | gap 1, opp_overlap 1632157 1632156, overlap 1632168 CCATCCAGACAAAAG CGGCCCCTTGC-GCA ACGA TGCAGCAAGGGGCCG GCTCTGCGAGGGATT ydeE 1633749 - 1632553 - | putative MFS-type transporter YdeE TERM 2228 1632916 - 1632904 - G 79 -3.3 -5.24129 | CCCGGCGATAAAAAA GACGG TGC CGGTC GTCATCATTGGTCGA TERM 2229 1633626 - 1633576 - G 100 -13.5 -3.95456 | gap 1, overlap 1633578 1633579 1633581 AAAGCCAAGACTAAA GACGACGCCGATTGTTAACGCGCT GGTC AGCGCGTTAACAATCAG-ATCCAC GCCTAAACCGTACTG TERM 2230 1633625 - 1633578 - G 95 -15 -3.55486 | overlap 1633576 1633579 1633581 AGCCAAGACTAAAGA CGACGCCGATTGTTAACGCGCT GGTC AGCGCGTTAACAATCAGATCCA CGCCTAAACCGTACT TERM 2231 1633623 - 1633579 - G 95 -18.2 -2.72568 | gap 1, overlap 1633578 1633576 1633581 GCCAAGACTAAAGAC GACGCCGATTGTTAACGCGCT GGTC AGCGCGTTAACAATCAG-ATC CACGCCTAAACCGTA TERM 2232 1633622 - 1633581 - G 86 -15.3 -2.9003 | overlap 1633579 1633578 1633576 CAAGACTAAAGACGA CGCCGATTGTTAACGCGCT GGTC AGCGCGTTAACAATCAGAT CCACGCCTAAACCGT ydeD 1633977 - 1634879 + | O-acetylserine/cysteine export protein TERM 2233 1634991 - 1634973 - T 100 -12.4 -5.52986 | ACGGTACTAAAAAAA TGCCCCGC AAA ACGGGGCA AAGAGGTTAAAGGTG marB 1635255 - 1634998 - | hypothetical protein marA 1635625 - 1635242 - | DNA-binding transcriptional activator MarA marR 1636079 - 1635645 - | DNA-binding transcriptional repressor MarR marC 1636338 - 1637003 + | multiple drug resistance protein MarC TERM 2234 1637012 - 1637045 + T 81 -12.5 -3.13639 | opp_overlap 1637027, overlap 1637010 1637008 CCACTAAGGCGCATT TTCATCTGCCGGAAA CCTG TTCCCGGCAGACGAA TGTCTTAATGCGGTT ydeA 1638240 - 1637050 - | sugar efflux transporter TERM 2235 1637744 - 1637734 - G 74 -2.4 -5.0538 | GCCGATGGCAAAAAA GGTG GTG CGCC AGCCAAAATACTGAC yneI 1639331 - 1640719 + | putative succinate-semialdehyde dehydrogenase yneH 1640792 - 1641718 + | glutaminase TERM 2236 1641752 - 1641773 + G 86 -10.1 -4.3467 | overlap 1641749 TCTTTGCCCGCCTGG CGCGATCGA CATT TCGTTCGCG TTTTCGTCTCGGGAT yneG 1641718 - 1642077 + | hypothetical protein TERM 2237 1642084 - 1642099 + F 76 -9 -3.69094 | CAGCGGTAGAGCAGC GCGTCA TTGC TGACGC TTTCCCTGATAAATT yneE 1642301 - 1643248 + | putative inner membrane protein SC1545 1643846 - 1643304 - | putative outer membrane protein SC1546 1643931 - 1643734 - | hypothetical protein TERM 2238 1645629 - 1645616 - g 70 -6.7 -4.11751 | ATCAATCTGCTAAAA GATGG CAAC CCATC GAATCCTAATACAGA ompC 1644563 - 1645681 + | putative outer membrane protein TERM 2239 1645783 - 1645799 + T 100 -10.1 -5.49234 | TCTTTTATTATTTCA GGACGCT TCT GGCGTCC TTTTTTATTGCCTAT hybF 1646163 - 1645822 - | putative hydrogenase hupK 1646997 - 1646176 - | putative dehydrogenase protein hoxQ 1648112 - 1647051 - | putative hydrogenase hyaE 1648540 - 1648130 - | putative hydrogenase hupF 1648836 - 1648537 - | putative hydrogenase protein hupD 1649444 - 1648836 - | putative hydrogenase maturation protease cybH 1650124 - 1649450 - | putative Ni/Fe-hydrogenase 1 b-type cytochrome subunit TERM 2240 1649810 - 1649790 - G 100 -7.6 -5.14563 | TTTTCGAGGAAAAAA TACCAGCG GATTT CGCTGATA ACGCCTTTGCGCCAG mbhL 1650947 - 1650144 - | putative hydrogenase-1 large subunit mbhS 1651279 - 1650950 - | putative hydrogenase-1 small subunit pqaA 1651686 - 1651177 - | PhoPQ-regulated protein SC1558 1652172 - 1652035 - | putative multidrug efflux protein SC1559 1652603 - 1652136 - | putative monooxygenase TERM 2241 1652876 - 1652862 - R 72 -2.8 -5.0538 | opp_overlap 1652862 GTGTATGTCAAAAAA CTTCTG GCC CATAAG TTTGATCCCTTCCCT TERM 2242 1652996 - 1652980 - R 100 -10.1 -5.64274 | opp_overlap 1652980 GCAGGCATAAAAAAA CCGGCCA CTG TGACCGG TTCGTCGCGCAGGTT treY 1654543 - 1653209 - | putative glycosyl hydrolase TERM 2243 1653684 - 1653702 + g 80 -4.5 -5.02074 | overlap 1653686 CAGTCCTCAGGAAGT TGCTCGC CTTTA GCGAGAA TTTTTTCCACGGTGA TERM 2244 1653852 - 1653864 + g 73 -5.5 -4.66537 | opp_overlap 1653841, overlap 1653853 ATCAGCCGATGTGTA TCGTC GAA GACGG TTTTATCTTCCACCC TERM 2245 1654182 - 1654161 - G 77 -3.5 -5.00616 | overlap 1654165 GTGTCGCCTAAAAAA GGCAGCGTC AGTC GGCGCGACC AGTCAATATCGAAAT TERM 2246 1654239 - 1654250 + g 74 -7.2 -4.07885 | TATTCAAGCACGTCA CGCC ACCA GGCG TTTTCCAGCGAGCTG treZ 1656324 - 1654540 - | putative alpha amylase TERM 2247 1655028 - 1655001 - G 100 -7 -5.77853 | AATCGGTAAAAAAAA GAAAAGGACGGC TTTC GCCATACTCTTC GCCCATAAAAAGCAG SC1562 1657238 - 1656453 - | putative outer membrane or secreted lipoprotein TERM 2248 1656852 - 1656869 + g 95 -6.3 -5.31275 | gap 1, overlap 1656855 GGATTTCACCTCGTA CTGGTGGC TGT GCCAC-AG TTTTTTCTCCTCGGG TERM 2249 1657361 - 1657344 - R 75 -6.2 -4.53036 | opp_overlap 1657344 1657336, overlap 1657339 TCACAAATAGTAAAA CCCGAC ACACAG GCCGGG TTTTGATATCAGTTT hdeB 1657710 - 1657381 - | acid-resistance protein TERM 2250 1657943 - 1657910 - R 89 -8.9 -4.66833 | TTTTAAGGCGAAAAA GTAGACCACGACAAT AGCC ACTGATGTGGTCTAC GGCGCGTTGAGGTGA osmC 1658491 - 1658060 - | putative resistance protein, osmotically inducible yddX 1659003 - 1659218 + | biofilm-dependent modulation protein rpsV 1659313 - 1659456 + | 30S ribosomal subunit S22 TERM 2251 1659483 - 1659504 + F 100 -13.1 -5.38054 | opp_overlap 1659473 1659483 TGAAATGACGTTAAA CACCATTGC ATCT GCAATGGTG TTTTTGTTTATAGGA TERM 2252 1659504 - 1659483 - f 90 -13.1 -3.65353 | opp_overlap 1659483, overlap 1659473 TGAAATGACGTTAAA CACCATTGC ATCT GCAATGGTG TTTTTGTTTATAGGA TERM 2253 1660613 - 1660626 + G 72 -2.3 -4.9218 | opp_overlap 1660610 TTTAAGCGAAGATGC CGCTC GACA GAACG TTTTTATGGTCGATC sfcA 1659597 - 1661330 + | malate dehydrogenase TERM 2254 1661335 - 1661360 + F 74 -11.1 -2.82317 | opp_overlap 1661333, overlap 1661333 CTTCCATTTAATACG TACCCGGCGGT GAAT GCCGCCGGATA TCACTTTCTTCTTTA TERM 2255 1661775 - 1661750 - g 75 -6.1 -4.64766 | TCTACACGTGAAAAA CGGCGATTTCG GTGA CAAAACCGGCG TCATTCTGGGACACG TERM 2256 1661849 - 1661867 + G 85 -8.8 -4.37886 | opp_overlap 1661841 1661842, overlap 1661850 GCTGAAACCCGGCGA TCGCGCGA GTG TCGCGTGG TTTTATGAAGGATGC TERM 2257 1662312 - 1662292 - g 79 -3.2 -5.14563 | gap 1, opp_overlap 1662292 TTGTGCAGGAAAAAA CCGGTGGCG CGCA CGC-AGCGG TGGTTACCGCGGTCG adhP 1661616 - 1662626 + | alcohol dehydrogenase TERM 2258 1662703 - 1662665 - T 87 -14.9 -2.91511 | gap 1, opp_overlap 1662671 1662674, overlap 1662671 TATACAGACAGCAGA TGA-AAACAAGGCGCTAC GAGG ATAGCGCCTTGTTTATCA GATCGCGAAAGAATT TERM 2259 1662696 - 1662671 - T 100 -14.1 -4.38171 | opp_overlap 1662671 1662674, overlap 1662665 GACAGCAGATGAAAA CAAGGCGCTAC GAGG ATAGCGCCTTG TTTATCAGATCGCGA TERM 2260 1662671 - 1662696 + T 95 -13.4 -3.89346 | opp_overlap 1662671 1662665, overlap 1662674 GACAGCAGATGAAAA CAAGGCGCTA CGAGGA TAGCGCCTTG TTTATCAGATCGCGA TERM 2261 1662674 - 1662693 + T 79 -9.3 -4.07877 | opp_overlap 1662671 1662665, overlap 1662671 AGCAGATGAAAACAA GGCGCTA CGAGGA TAGCGCC TTGTTTATCAGATCG fdnI 1663373 - 1662717 - | formate dehydrogenase-N subunit gamma fdnH 1664250 - 1663366 - | formate dehydrogenase-N, Fe-S beta subunit, nitrate-inducible TERM 2262 1663461 - 1663476 + g 90 -10.4 -4.27192 | opp_overlap 1663459 1663460 AAGTGGCGATAAAGC CCGCTG CGGC CAGCGG TTTTAGTGCCCCTTT TERM 2263 1664172 - 1664206 + g 74 -7.9 -4.15222 | gap 1, opp_overlap 1664180, overlap 1664173 TCGCGACTTCGGCTT TGTAATCACG-CGCCT GCGG AGGCGGCGTGATGGCG TTTGTTGCGGACCGT TERM 2264 1666537 - 1666565 + H 80 -6.7 -4.75174 | opp_overlap 1666540 GCGTAAAGCGTGGAT CAACGACGATCAG CGT CGCATCGTTGTTG TTTTTCGCTTCCATC yddG 1667589 - 1668470 + | hypothetical protein TERM 2265 1669536 - 1669523 - g 71 -4.5 -4.63527 | gap 1, overlap 1669524 1669527 GTACCAGGGCAAAAA CGACCG TGA CGG-CG CGTACGAGTCTAACG nmpC 1668993 - 1670081 + | new outer membrane protein; porin TERM 2266 1670125 - 1670105 - f 91 -11.1 -4.19624 | opp_overlap 1670105 TAGTCTGAATACAAA GCCAGTCCT TTC AGGGCTGGC TTTTTCTCTTGATGT TERM 2267 1670105 - 1670125 + F 100 -13.3 -5.13344 | opp_overlap 1670105 TAGTCTGAATACAAA GCCAGTCCT TTC AGGGCTGGC TTTTTCTCTTGATGT SC1573 1670165 - 1670605 + | putative cytoplasmic protein smvA 1672117 - 1670630 - | methyl viologen resistance TERM 2268 1670949 - 1670965 + g 93 -9.3 -4.82901 | GCCATCGTTTCTATC GCGCCGG CCG CCGCCGC TTTTTCTGCCGGCGC SC1575 1672235 - 1672813 + | TetR family transcriptional regulator TERM 2269 1672976 - 1672962 - f 73 -7.8 -4.12599 | opp_overlap 1672960 1672962 1672970 AATAAGTTCTCAAAA GAGCGC GTG ACGCTC TGTCTCTTTTTTGTG TERM 2270 1673099 - 1673086 - g 70 -6.7 -4.13767 | CTGGCGACCCGAAAA TCCAG CCTT CTGGA AGAATAAAGGGAAAG TERM 2271 1674207 - 1674240 + G 73 -5.1 -4.54449 | gap 1, overlap 1674208 ATGAGCAGGCGCAGC GCGA-AGCGGTGACGG ATA CCGCCGCCGCGCTCGG TTTTATCTCCGCTAT narU 1673027 - 1674415 + | major facilitator superfamily nitrate extrusion protein TERM 2272 1674793 - 1674774 - f 100 -16.4 -3.2827 | TTACCGAACCATGAA CCGCGCGG CTGC CCGCGCGG CGCCAGCTACTCCTG TERM 2273 1675013 - 1674999 - f 79 -10 -3.66178 | opp_overlap 1675001 CGTTCGAACTGGAAA GAGCTG AAT CAGCTC ATTGCCGCCGCTAAC TERM 2274 1677555 - 1677526 - f 85 -13.7 -3.08776 | gap 1, overlap 1677523 AACCGCGCAAAATTA TCTCCAGCCC-GAC CTG GTCAGGGCTGGAAA GCGAGCATGTCTCTT TERM 2275 1678341 - 1678327 - g 73 -5.6 -4.59773 | CGTCACCTGTAAAAA CGTCTG GAC CGGACG TGAAGGGATGGAATA TERM 2276 1678420 - 1678408 - g 71 -4.8 -4.62069 | CGGCTATCCCAAAAA CTGG GAAGA CCAG CAGGAGTGGCAAGGC TERM 2277 1678999 - 1679012 + G 77 -8.1 -4.15222 | TCCGCGTATTGAATC CGGTC AGCC GACCG TTTGTTCGGAAACCT TERM 2278 1679210 - 1679200 - g 70 -6.8 -4.09864 | overlap 1679201 AGGCATCCCGCAAAA CGTC ATC GACG CCGCCCAACGGTCGC narY 1678244 - 1679788 + | nitrate reductase 2, beta subunit narV 1679788 - 1681155 + | nitrate reductase 2, gamma subunit TERM 2279 1681834 - 1681844 + G 90 -4.6 -5.37593 | opp_overlap 1681822 TCAGCCAGCAAATTG GCTG TAA CGGC TTTTTTCCTTTCCAG yddE 1681260 - 1682153 + | hypothetical protein nhoA 1682356 - 1682189 - | putative arylamine N-acetyltransferase TERM 2280 1682562 - 1682596 + r 82 -7.8 -4.56775 | opp_overlap 1682583, overlap 1682570 GTTCTGAGAATCTCT TTGCGACACGCCGCCA AAA TAGCGGCGTGTTAAAA TTTTTAACGCCAGCT TERM 2281 1682570 - 1682588 + r 74 -10.2 -3.17553 | opp_overlap 1682583, overlap 1682562 AATCTCTTTGCGACA CGCCGCCA AAA TAGCGGCG TGTTAAAATTTTTAA SC1581 1683289 - 1682657 - | hypothetical protein ansP 1683802 - 1685295 + | L-asparagine APC transporter TERM 2282 1685307 - 1685330 + T 100 -14.6 -3.74747 | gap 1 ATAACATTACCCTTC CCCGGCA-GCC CCA GGCCTGCCGGG TTTAATGCGCGTTGC ygdR 1685593 - 1685372 - | putative outer membrane lipoprotein yncE 1686799 - 1685738 - | putative periplasmic protein TERM 2283 1686775 - 1686762 - G 71 -5.9 -4.33582 | overlap 1686765 CCTAACAATAAAGAA CCACG CAGG CGCGG CGAAAAAAGATGACG TERM 2284 1687752 - 1687737 - g 82 -5.4 -5.00616 | overlap 1687739 CGGCGCGCGAAAAAA TCTGGC TAAT GCCAAA CTGGGCGTGCGCCTT TERM 2285 1687775 - 1687792 + G 78 -6.3 -4.79223 | TGCGCCTTGACGATG TCAGTGA ACTT TCGCTGA TTTTTAATAGTGTGG TERM 2286 1688051 - 1688038 - g 81 -8.1 -4.2349 | GTGGCACAGCTAAAA CCAGC CCAG GCTGG CGGCGTAATTACACT TERM 2287 1688717 - 1688703 - g 77 -4.2 -4.88736 | overlap 1688704 1688714 1688715 CACTACCTACAAAAA CGCG GGCAAAA CGCG CCGCCAGGGCGCAGA TERM 2288 1688730 - 1688714 - g 74 -7.2 -4.10855 | overlap 1688703 1688704 1688715 AAAACGCGGGCAAAA CGCGCC GCCAG GGCGCA GAACTTGCGTTGGAC yncD 1687063 - 1689183 + | paral putative outer membrane receptor TERM 2289 1689195 - 1689213 + T 90 -14.6 -3.19642 | opp_overlap 1689187 1689185 1689197 ATAAATATCCGGCAA TAGCGGGG AAC CCCCGCTA TTGATAAGTCATAGT TERM 2290 1689211 - 1689197 - T 80 -12.8 -3.04515 | opp_overlap 1689195, overlap 1689187 1689185 AAATATCCGGCAATA GCGGGG AAC CCCCGC TATTGATAAGTCATA TERM 2291 1689271 - 1689287 + T 75 -9.5 -3.48924 | TTTTAATCGTCGCTA CGTTTTG TTG CAAAACG TTCTGTAGGCAGTGG TERM 2292 1690211 - 1690229 + T 100 -8.8 -5.63517 | ATTTGCACATTTTTA TGGCGACA TAA TGCCGCCA TTTTTTCTTTACGCA yncB 1691308 - 1690238 - | putative NADP-dependent oxidoreductase TERM 2293 1691794 - 1691784 - g 70 -6.8 -4.08216 | GGACTGGGGCGAAAA CTGC TCA GCAG ACTGATCGACGAAGC yncA 1691487 - 1692002 + | putative acyltransferase TERM 2294 1692222 - 1692244 + G 100 -6.3 -5.56264 | gap 1, overlap 1692226 TTCGCTGGTGGACAT TGATCCCCGG TTTG CTGGGG-TCA TTTTTTGTATTTGCC TERM 2295 1692417 - 1692445 + G 74 -6.6 -4.30978 | overlap 1692418 CGCTGTTGCTGGTCA TTGGCGCATGGC TGATT GCGAAGCGCCAG TTTTAATGGGTTACA ydcZ 1692002 - 1692451 + | hypothetical protein ydcY 1692689 - 1692456 - | hypothetical protein TERM 2296 1693460 - 1693446 - g 73 -5.6 -4.64676 | opp_overlap 1693446 1693448 GGAGCCCGAAGAAAA GCCGCT GGT AGAGGC GGCGTTTAGTCAGGC TERM 2297 1693654 - 1693664 + G 78 -2.4 -5.252 | overlap 1693638 GTGGTTATCGCCGCC GTCG CCA CGCC TTTTTTCTGGCCATC srfA 1692913 - 1694238 + | ssrAB activated gene TERM 2298 1694782 - 1694800 + G 74 -6.6 -4.23213 | CCAGACATGGATTGA CGGCTGGC TGC GCGAGTCG TTTCTTCAGTATGCC TERM 2299 1697025 - 1697010 - g 70 -6.8 -4.11484 | CCGAACTGGCGAAAA CCATCG CTGG CGACGG CGTACTGAATGTGCG srfB 1694243 - 1697224 + | ssrAB activated gene TERM 2300 1697963 - 1697951 - g 86 -10.5 -4.16284 | ATATGTTGCAACAAA CCGGC CAT GCCGG GGAACTGGCGGCGCC TERM 2301 1698091 - 1698115 + G 73 -9.2 -3.82098 | opp_overlap 1698091 CATCCGGTTAAGGAA GGCCGACTGC TCAAT GCGGTCAGCC TTTCGCTTGATTCTC srfC 1697221 - 1699365 + | ssrAB activated gene: coiled-coil structure TERM 2302 1699407 - 1699379 - T 72 -5.2 -4.57073 | overlap 1699380 1699383 GACCTGGCGGAAAAA CCATGCCCGGTA ACCTG TATCGGGCTTGA GGTCAGAAAAGCGAA ydcX 1699673 - 1699410 - | putative inner membrane protein TERM 2303 1699618 - 1699630 + g 79 -3.3 -5.27335 | CAGAGGAAAAAACGC GCGCA ATA TGCTC TTTTTATTTGACACA TERM 2304 1699899 - 1699947 + r 100 -8.8 -5.08011 | gap 1, overlap 1699902 1699903 CAACCTTTGAGTACT TGCTGCGCATGTTGGCGGGGAGG TCCC CCTCTCCGCCGACACCCGCC-TA TTTTTTCACGATTTT TERM 2305 1699902 - 1699945 + r 100 -15.2 -4.15235 | overlap 1699899 1699903 CCTTTGAGTACTTGC TGCGCATGTTGGCGGGGAGG TCCC CCTCTCCGCCGACACCCGCC TATTTTTTCACGATT TERM 2306 1699903 - 1699944 + r 100 -18.7 -3.08056 | overlap 1699902 1699899 CTTTGAGTACTTGCT GCGCATGTTGGCGGGGAGG TCCC CCTCTCCGCCGACACCCGC CTATTTTTTCACGAT ydcW 1701406 - 1699982 - | gamma-aminobutyraldehyde dehydrogenase ydcR 1702966 - 1701542 - | GntR family transcriptional regulator pdgL 1703872 - 1703102 - | periplasmic dipeptidase for D-ala-D-ala digestion in peptidoglycan TERM 2307 1703498 - 1703510 + g 77 -4.1 -5.05577 | ATTTTTCTCTACCTG CGGAT AAA ATTCG TTTTTCATTTGGTTT SC1597 1704361 - 1704131 - | putative inner membrane protein ugtL 1704792 - 1704394 - | hypothetical protein TERM 2308 1705239 - 1705224 - H 76 -4 -5.05505 | gap 1, overlap 1705227 AGGACAAAGCAAAAA TCAGGTG TTT CACC-GA TAGGCAAACCGATGG sifB 1705329 - 1706279 + | secreted effector protein yncJ 1706553 - 1706783 + | hypothetical protein ydcP 1708748 - 1706784 - | putative collagenase TERM 2309 1707918 - 1707904 - G 100 -4.2 -5.8187 | GAGGGAACAAAAAAA TGCTCG GTC CGACCA ACCGATGCACGCGCC TERM 2310 1708689 - 1708679 - G 70 -6.8 -4.18018 | CTGCGCCATGCAAAA TCGC TTC GCGA GCAATTGCGGCGTCA ydcN 1709363 - 1708827 - | putative oxidoreductase/putative repressor TERM 2311 1710144 - 1710134 - g 77 -8.2 -4.14243 | GATGGCATCGCAAAA CGCC CCC GGCG TCGCCACAATGAAGG TERM 2312 1710226 - 1710237 + G 79 -7.2 -4.42974 | overlap 1710211 TGGCGCTGCTGCTTT CGCC ATTT GGCG TTTATTCTATCTGCA TERM 2313 1710329 - 1710339 + G 100 -8.2 -5.72053 | opp_overlap 1710283 CTGGTTAGCGGTCGC CGCC GCA GGCG TTTTTTATTTACTTG ydcO 1709394 - 1710632 + | putative benzoate membrane transport protein ydcL 1711312 - 1710686 - | putative outer membrane lipoprotein TERM 2314 1711304 - 1711265 - G 87 -13.6 -3.30629 | overlap 1711263 1711266 TAAGAATCCAGAATA CTTATCCGGCTGTGTGAC TTTG GACGCACAGCCGGATAAC GCCAGCAAGCCAGTA TERM 2315 1711303 - 1711266 - G 90 -17.1 -2.57654 | overlap 1711265 1711263 AAGAATCCAGAATAC TTATCCGGCTGTGTGAC TTTG GACGCACAGCCGGATAA CGCCAGCAAGCCAGT tehB 1712114 - 1711518 - | tellurite resistance protein TehB tehA 1713114 - 1712101 - | potassium-tellurite ethidium and proflavin transporter TERM 2316 1712338 - 1712327 - G 72 -2.2 -4.86621 | ACGCCGAACGAAAAA CTCC AGAA GGAA GCATTAAACGGTTGT TERM 2317 1713102 - 1713113 + g 74 -2.2 -5.06223 | overlap 1713072 CGCGATCGCTCTGCT TGTG ATTA CGCA TTTTGTTTAATTTAT TERM 2318 1713352 - 1713338 - R 82 -11.4 -3.63895 | opp_overlap 1713347 TTTAACGATGTTAAA GCCGGA ACC TCCGGC GGCTGGGTTGATGCC rimL 1714738 - 1714199 - | ribosomal-protein-L7/L12-serine acetyltransferase sgcX 1714955 - 1716073 + | putative cellulase protein TERM 2319 1716154 - 1716136 - g 74 -3 -4.86001 | overlap 1716138 ATGATTGCACAAAAA CTGCAGGA CTT TCTTGCGG AGCAAGGCATTGCGG sgcB 1716070 - 1716351 + | putative PTS system, enzymeIIB component TERM 2320 1717356 - 1717366 + G 90 -4.6 -5.38047 | CGCTGGCTGATTTAC CGGT TGC GCCG TTTTTTATCTGCATG sgcC 1716362 - 1717675 + | putative PTS system enzyme IIC component TERM 2321 1718435 - 1718418 - g 80 -4.7 -5.03715 | opp_overlap 1718418, overlap 1718420 1718421 ACCACGTTTAAAAAA GACGGCG TCTT CGCCAAC TTTGTCGACCAGGCG sgcQ 1717689 - 1718495 + | putative nucleoside triphosphatase TERM 2322 1718524 - 1718498 - f 100 -11.6 -4.78237 | overlap 1718499 TATCCGACAATAAAA TGGGGATAAGCA AAA CGCTTATCCCCT GCAGAGAGCGATAAC TERM 2323 1718523 - 1718499 - f 100 -15.1 -3.46219 | overlap 1718498 ATCCGACAATAAAAT GGGGATAAGCA AAA CGCTTATCCCC TGCAGAGAGCGATAA sgcA 1718627 - 1719064 + | putative sugar specific PTS enzyme II sgcE 1719076 - 1719708 + | ribulose-phosphate 3-epimerase TERM 2324 1720101 - 1720087 - g 83 -7.2 -4.55798 | GACGCCAAAGTAAAA GTCATT TGC AATGAC ATCAAAATCGCTAAT sgcR 1719724 - 1720515 + | DeoR family transcriptional regulator aac6 1720515 - 1720952 + | cryptic aminoglycoside resistance gene TERM 2325 1720972 - 1720992 + T 100 -15.5 -4.23674 | opp_overlap 1720972 AATCATACAGGAAAA GGTCGGGTA TAG TACCCGACC TTTATATTACTGGGG TERM 2326 1720992 - 1720972 - T 100 -15.5 -4.4084 | opp_overlap 1720972 AATCATACAGGAAAA GGTCGGGTA TAG TACCCGACC TTTATATTACTGGGG gox 1722201 - 1720999 - | putative oxidase yceI 1722788 - 1722213 - | putative periplasmic protein mdoD 1724699 - 1722984 - | glucan biosynthesis protein D TERM 2327 1724438 - 1724460 + g 75 -6.1 -4.65895 | GCGTATCCGGCAAGG GCCCCGGCG CGCCA CCCCAGGGC TTTTTCGCTAACGCC TERM 2328 1724527 - 1724509 - G 72 -3.8 -4.70319 | CCAGCAAAATCAAAA CGGACAAT TTT ACCATCCG CAATATCGGATTCCG TERM 2329 1725374 - 1725391 + r 73 -2.5 -5.22039 | opp_overlap 1725350 1725376, overlap 1725375 1725376 TTAACCCCAGGCCAA CACGCCG CTCC CGGCGCA TTTTTTGAATTTGAC TERM 2330 1725389 - 1725376 - R 70 -9.5 -3.0634 | opp_overlap 1725376 1725375 1725374, overlap 1725350 AACCCCAGGCCAACA CGCCG CTCC CGGCG CATTTTTTGAATTTG TERM 2331 1725649 - 1725659 + r 76 -2.4 -5.40072 | opp_overlap 1725641 CCAAGATGTTCCGCC AGCG CAA CGCC TTTTTTTAGCGCCAC ydcj 1727759 - 1726416 - | putative cytoplasmic protein TERM 2332 1728455 - 1728436 - g 75 -3.5 -4.89233 | overlap 1728437 CATCAACAGCAAAAA TCGACCT CGTTAC AGGTCGC GACCATGAACAATAC TERM 2333 1728688 - 1728673 - g 77 -8.2 -4.07568 | GTCGTCTCGCCAAAA GGCACG GTAC CGCGCC AGAATGCGGAAGCCC ydcI 1727983 - 1728975 + | LysR family transcriptional regulator TERM 2334 1729029 - 1728996 - T 100 -15.3 -3.25823 | gap 1, opp_overlap 1728996 1728995, overlap 1728997 1729016 GCTGTCGGACATTAA CCGCGCCCGC-GGCTA AAA TAGCCCGCTGGCGCGA CGCTTATTAAAGGAA TERM 2335 1729028 - 1728997 - T 95 -16.6 -2.55351 | gap 1, opp_overlap 1728996 1728995, overlap 1728996 1729016 CTGTCGGACATTAAC CGCGCCCGC-GGCTA AAA TAGCCCGCTGGCGCG ACGCTTATTAAAGGA trg 1730661 - 1729036 - | methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor TERM 2336 1730824 - 1730800 - R 100 -15.7 -4.5538 | opp_overlap 1730795, overlap 1730801 1730814 AGAAAATTCAGAAAA GCGCCAGCGGA AAA TCCGCTGGCGG ATGAATCAGTTATCG TERM 2337 1730823 - 1730801 - R 100 -19.2 -3.31601 | opp_overlap 1730795, overlap 1730800 1730814 GAAAATTCAGAAAAG CGCCAGCGGA AAA TCCGCTGGCG GATGAATCAGTTATC adh3 1731948 - 1730830 - | alcohol dehydrogenase class III TERM 2338 1731391 - 1731375 - G 80 -4.3 -4.98531 | opp_overlap 1731390, overlap 1731376 CGCCTAAACCAAAAA CGGCAAC GGT GTCGCCC GCTTTCACTTTAGCG yohL 1732360 - 1731980 - | putative cytoplasmic protein TERM 2339 1732711 - 1732693 - H 75 -3.2 -5.25803 | AATGTGGACAAAAAA TCAAATGA GCG TTATTTGA AAGATTTTTAATACC dpr 1732778 - 1733179 + | putative dipicolinate reductase tfpB 1733969 - 1733607 - | putative inner membrane protein TERM 2340 1734182 - 1734192 + H 75 -3.2 -5.18561 | AGCACACTAAAATCA GGAG TGG CTTC TTTTTTAGATCTTTG TERM 2341 1734536 - 1734521 - g 70 -5.4 -4.42788 | TTTAATGCGATAAAA GAAAGC GCAC GCCTTC CGGAATTAAGTTTAT TERM 2342 1734877 - 1734889 + G 84 -6.3 -5.00616 | TTCTTTGGGTGATAT TACCA GAC TGGTA TTTTTTGGCGACAGC TERM 2343 1735151 - 1735171 + G 77 -3.9 -5.06816 | overlap 1735153 GCATCTTACACCCCT TCTCACCAG GAC CTGGCGATA TTTTTATTGGGGGCT TERM 2344 1735153 - 1735169 + G 70 -6.5 -4.16307 | overlap 1735151 ATCTTACACCCCTTC TCACCAG GAC CTGGCGA TATTTTTATTGGGGG sseJ 1734452 - 1735678 + | translocated effector: regulated by SPI-2 SC1627 1736143 - 1735799 - | putative inner membrane protein SC1628 1737050 - 1737280 + | putative periplasmic binding protein TERM 2345 1737608 - 1737629 + F 80 -7.3 -4.72188 | AATGGCAATCTTGAT CTGGCTTTT ATAG AAGAGCCGG TTTATTTTACCTTCA yckA 1737817 - 1738464 + | putative amino acid ABC transporter permease component gltL 1738489 - 1739220 + | putative ABC-type polar amino acid transport system, ATPase component SC1631 1739217 - 1739897 + | putative ABC-type transport system membrane spanning protein TERM 2346 1740468 - 1740455 - g 71 -5.9 -4.23615 | opp_overlap 1740455 ATTACAGTCAAGAAA CGCGC ATGT ACGCG TTAATGGGAATGCTA SC1632 1740034 - 1740534 + | putative inner membrane protein SC1633 1740813 - 1740962 + | hypothetical protein TERM 2347 1741347 - 1741319 - f 72 -10.3 -2.87211 | overlap 1741343 ACTTTTCTTTATACA CCGCCTAACGCTC ATG GAACATCAGGCAG ACCGAATGCCTATGG TERM 2348 1742663 - 1742678 + G 70 -6.8 -4.09243 | opp_overlap 1742663 1742661, overlap 1742665 GACTTTGGAGCAACA TGGCGC CGTT GCGCTA TTTTCCGCCACTATG ybcY 1742046 - 1742708 + | putative SAM-dependent methyltransferase TERM 2349 1742854 - 1742887 + T 78 -6.7 -4.61199 | AGACCCGTCCTCCTT CGCCTGCGTCA CGGGTCCTGGTT AGACGCAGGCG TTTTCTGTATGGAAT TERM 2350 1743425 - 1743403 - T 79 -11.3 -3.30619 | opp_overlap 1743403, overlap 1743418 AACTAGGGCCGATAA CTACGCGGC GCAAA ACCGCGTAG TTCCATCGCGGCGTA TERM 2351 1743403 - 1743425 + T 73 -10.6 -3.05596 | opp_overlap 1743403 1743418 AACTAGGGCCGATAA CTACGCGG CGCAAAA CCGCGTAG TTCCATCGCGGCGTA TERM 2352 1743595 - 1743622 + T 78 -6.2 -4.62069 | overlap 1743597 AGATGGTGGTCGCAC TTGCCCGTTCAC CCTC GCAAACGGGCGA TTTTTAGCGTAACGC ydcF 1744426 - 1743626 - | hypothetical protein hrpA 1748335 - 1744490 - | ATP-dependent RNA helicase HrpA TERM 2353 1748646 - 1748663 + G 75 -6.3 -4.63932 | overlap 1748648 AGGGTACTCTCAGTC TGGTCAG TTGA CTGACTA TTTTATTGAACAATG acpD 1748593 - 1749198 + | azoreductase TERM 2354 1749204 - 1749231 + T 72 -8.4 -3.74526 | overlap 1749205 1749208 1749224 GGCCGCTTAAATATT TTTGCCTCCCGT TTCG ACGGGAGGTGAC TTCTTAGGTTCGTAG TERM 2355 1749205 - 1749230 + T 77 -11.9 -2.84234 | overlap 1749204 1749208 1749224 GCCGCTTAAATATTT TTGCCTCCCGT TTCG ACGGGAGGTGA CTTCTTAGGTTCGTA TERM 2356 1749208 - 1749227 + T 83 -13.6 -2.67316 | overlap 1749205 1749204 1749224 GCTTAAATATTTTTG CCTCCCGT TTCG ACGGGAGG TGACTTCTTAGGTTC SC1638 1749644 - 1749195 - | putative inner membrane protein ydbL 1750110 - 1749787 - | putative periplasmic protein ynbE 1750309 - 1750118 - | putative outer membrane lipoprotein ydbH 1752945 - 1750309 - | hypothetical protein TERM 2357 1750349 - 1750363 + g 71 -4.2 -4.63486 | overlap 1750351 TTCCGGCAAGGAGGT TGCGGC AAT GCTGTA TTTTGTTCAAGCCAT TERM 2358 1750410 - 1750400 - G 70 -6.8 -4.0896 | overlap 1750406 1750407 AAATTGTCGCCAAAA CGCA AAC TGCG CCACAGCGTAAACAC TERM 2359 1751045 - 1751057 + g 72 -4.1 -4.77165 | overlap 1751040 AATGGCAGAATGAAA TCGAC GCC GTTGA TTTTGTTATCCGGCA TERM 2360 1753338 - 1753324 - g 70 -5.6 -4.4715 | overlap 1753325 TGCTAACCGAGAAAA CGGCGA AAA CCGCCA ATGGATGTGAAGCAG TERM 2361 1753435 - 1753410 - g 74 -2.4 -5.09173 | opp_overlap 1753414, overlap 1753424 GAAGAGCTGAAAAAA CACGGCGTGA AATACA TCGCGCTGCG TTGCGCCGGATTTAA ldhA 1753212 - 1754201 + | D-lactate dehydrogenase TERM 2362 1754208 - 1754231 + F 95 -12.4 -4.13767 | overlap 1754209 CTGTTCTAATCCTGT CGCTCCCCTG CGCT CAGGGGAGCA TTTTCGGATAACCCC TERM 2363 1754209 - 1754230 + F 93 -15.9 -3.08046 | overlap 1754208 TGTTCTAATCCTGTC GCTCCCCTG CGCT CAGGGGAGC ATTTTCGGATAACCC hslJ 1754312 - 1754722 + | heat-inducible protein ydbJ 1755032 - 1754766 - | putative cytoplasmic protein nifJ 1755308 - 1758832 + | putative pyruvate-flavodoxin oxidoreductase TERM 2364 1758887 - 1758868 - f 100 -13.6 -5.95539 | opp_overlap 1758868 1758861 CTGGAAACAAAAAAA GCCCGAAC ATCC GTTCGGGC TTGTCAATTTATACG TERM 2365 1758868 - 1758887 + F 93 -13.6 -3.50047 | opp_overlap 1758868, overlap 1758861 CTGGAAACAAAAAAA GCCCGAAC ATCC GTTCGGGC TTGTCAATTTATACG ynaF 1759314 - 1759748 + | hypothetical protein emrE 1760136 - 1759798 - | putative membrane transporter of cations intR 1760300 - 1760440 + | putative lambdoid prophage Rac integrase ydaO 1760492 - 1761427 + | C32 tRNA thiolase TERM 2366 1761467 - 1761428 - T 80 -10 -4.01381 | gap 1, opp_overlap 1761428 1761433, overlap 1761429 ATCGAAGTGAAATAA TCTGCA-GGCGTCTCAGCA CTC CGCTGAGACGCCATGCTAT CGATCATTTTAATAG TERM 2367 1761466 - 1761429 - T 82 -13.5 -3.00106 | gap 1, opp_overlap 1761428 1761433, overlap 1761428 TCGAAGTGAAATAAT CTGCA-GGCGTCTCAGCA CTC CGCTGAGACGCCATGCTA TCGATCATTTTAATA TERM 2368 1761433 - 1761461 + T 86 -14.6 -2.66008 | opp_overlap 1761429 1761428, overlap 1761428 AGTGAAATAATCTGC AGGCGTCTCAGC ACTCC GCTGAGACGCCA TGCTATCGATCATTT dbpA 1762844 - 1761471 - | ATP-dependent RNA helicase DbpA TERM 2369 1762007 - 1761988 - G 74 -7.2 -4.12188 | gap 1 CTACCATTTGCAAAA CGC-ACCAA CGT TTGGTCGCG GTCGCGTTGTTCCAG TERM 2370 1762034 - 1762045 + g 71 -7.2 -3.96327 | overlap 1762025 CCAGATCGCCGTGGA GCGC CAAC GCGC TTTGTCCTACCGCAT TERM 2371 1762745 - 1762723 - G 75 -12.8 -2.65815 | TGCACACGCACATCA TTACCCGCCA GAA TGACGGGTAA TGCTGCGGCCTGAAC TERM 2372 1763142 - 1763123 - R 100 -7.1 -6.13 | ACAGGCAAAAAAAAA GCCGACT AATCTA AGCCGGC GTCGTACGAATCAAT zntB 1764315 - 1763332 - | zinc transporter TERM 2373 1764443 - 1764425 - R 88 -7.4 -5.03145 | GAACCTGCGAAAAAA GCGCCT TAGCAAC AGGCGC TTACCAAACATGTAT mcp 1765615 - 1764539 - | putative methyl-accepting chemotaxis protein SC1653 1765799 - 1765626 - | hypothetical protein ydaL 1766571 - 1766008 - | Smr domain-containing protein ogt 1766829 - 1767344 + | O-6-alkylguanine-DNA:cysteine-protein methyltransferase TERM 2374 1767705 - 1767689 - g 78 -6.5 -4.62783 | CATCGAGCGCAAAAA GCCCATT CAG AAAGGGC AAACTCTGTTTAAAG TERM 2375 1768256 - 1768244 - g 80 -9.1 -4.21908 | overlap 1768234 1768246 TATTACTATTGAAAA CAGCG ATG CGCTG GCGGCCCTCGCCGGT fnr 1767540 - 1768292 + | fumarate/nitrate reduction transcriptional regulator ydaA 1768443 - 1769390 + | universal stress protein UspE ynaJ 1769831 - 1769445 - | hypothetical protein ynaI 1769938 - 1770969 + | hypothetical protein TERM 2376 1771014 - 1770972 - T 87 -7.1 -5.18371 | gap 2, opp_overlap 1770976, overlap 1770976 1770977 TGCGACAAAATAAAA GATAGC-CGGTG-CCCGATAA GTG TTATCGGGGCACCGAGGCTTC CCTGTCCGGATGGCG TERM 2377 1771009 - 1770976 - T 86 -11.1 -3.67607 | gap 1, opp_overlap 1770976, overlap 1770972 1770977 ACAAAATAAAAGATA GCCGGTG-CCCGATAA GTG TTATCGGGGCACCGAG GCTTCCCTGTCCGGA TERM 2378 1771008 - 1770977 - T 87 -14.6 -2.78124 | gap 1, opp_overlap 1770976, overlap 1770976 1770972 CAAAATAAAAGATAG CCGGTG-CCCGATAA GTG TTATCGGGGCACCGA GGCTTCCCTGTCCGG ydcN 1771654 - 1771052 - | putative transcriptional regulator TERM 2379 1771429 - 1771419 - G 75 -6.8 -4.38712 | overlap 1771421 GCGACGTTGACAAAA TCCG CCA CGGA CACTCCCATTGCCGC TERM 2380 1771629 - 1771642 + g 79 -3.1 -5.2189 | overlap 1771639 TCGGCGCCCGCCGTG GTCGA TAAG TTGAC TTTTTTGGTCATTGG TERM 2381 1771838 - 1771826 - g 70 -9.1 -3.64488 | opp_overlap 1771825, overlap 1771824 AATCGCGCTAAAAGA GGCCT GTC AGGCC GTAATTAACGGCCAA SC1661 1771698 - 1772384 + | hypothetical protein SC1662 1772412 - 1772750 + | hypothetical protein SC1663 1774343 - 1773513 - | hypothetical protein TERM 2382 1774281 - 1774236 - G 79 -7.5 -4.4891 | gap 1, opp_overlap 1774257 CGTAGGAGGAGAAAA CATCCCGACGGTTGCCGCGGAC GTT GTCGACGA-ATCCGCCGAGACG CTTATCGGCACAGCC TERM 2383 1776327 - 1776352 + r 93 -12.7 -3.66646 | gap 1, overlap 1776328 1776329 TATTGTCTCCTGCTA TA-TCCCCCTGC CTG GCAGGGGGAGTA TTTAAATAAGATGTT TERM 2384 1776328 - 1776350 + r 86 -13.4 -3.41073 | overlap 1776327 1776329 ATTGTCTCCTGCTAT ATCCCCCTGC CTG GCAGGGGGAG TATTTAAATAAGATG TERM 2385 1776329 - 1776349 + r 95 -16.9 -2.64322 | overlap 1776328 1776327 TTGTCTCCTGCTATA TCCCCCTGC CTG GCAGGGGGA GTATTTAAATAAGAT SC1664 1777229 - 1776384 - | putative serine/threonine protein kinase TERM 2386 1778167 - 1778151 - g 72 -3.7 -4.7497 | TCGATGGAGGAAAAA TACCC ATGTCGA GGGTA ATAAAATGTGGTAAA cafR 1777523 - 1778380 + | AraC family regulatory protein TERM 2387 1778532 - 1778519 - f 76 -2.3 -5.33985 | TTTAAAAAAAATAAA TTGCG TGCA CGCGA CACCGGGGACAGATT TERM 2388 1779192 - 1779204 + G 84 -6.3 -5.02074 | opp_overlap 1779192 1779191 ATTGCAGAACAAAGT GAGAT TCA ATCTC TTTTTTACCCGCTCG TERM 2389 1779579 - 1779553 - g 73 -5.3 -4.63107 | gap 1, overlap 1779571 AGTAAAGAAGCAAAA GTTAAACGACTG AAAG CAGT-GCTTAAC ACCTTTTCGCGAAAC SC1666 1778827 - 1779882 + | putative cytoplasmic protein SC1667 1780350 - 1780096 - | putative outer membrane lipoprotein TERM 2390 1780429 - 1780443 + r 73 -2.1 -5.15634 | overlap 1780430 CCCTGTTTGTCCGTA TCTGA CTGGC TCAGG TTTTTTGATGCGCTG yjgJ 1781051 - 1780461 - | AraC family regulatory protein TERM 2391 1781597 - 1781579 - g 70 -8.8 -3.72893 | opp_overlap 1781587 1781588, overlap 1781580 1781582 1781591 TACGCCGCCAGTAAA TCAGCCCT ACA AGGGCTGG CGCGCGGCCTGGCCC TERM 2392 1781596 - 1781580 - g 72 -12.3 -2.83522 | opp_overlap 1781587 1781588, overlap 1781579 1781582 1781591 ACGCCGCCAGTAAAT CAGCCCT ACA AGGGCTG GCGCGCGGCCTGGCC yjgI 1781129 - 1781842 + | oxidoreductase TERM 2393 1781893 - 1781857 - T 80 -12.4 -3.05963 | opp_overlap 1781852 1781862, overlap 1781860 ACGGCTAGGCGAATA TCACACGGTTGCCG TCTACGCTC CGGCAACCGTGTTA GAAGCTGTTCATGTG TERM 2394 1781890 - 1781860 - T 83 -14.1 -2.75074 | opp_overlap 1781852 1781862, overlap 1781857 GCTAGGCGAATATCA CACGGTTGCCG TCTACGCTC CGGCAACCGTG TTAGAAGCTGTTCAT TERM 2395 1781862 - 1781888 + T 75 -10.9 -3.04248 | opp_overlap 1781860 1781857, overlap 1781852 TAGGCGAATATCACA CGGTTGCCG TCTACGCTC CGGCAACCG TGTTAGAAGCTGTTC SC1670 1782802 - 1781933 - | aldo/keto reductase family protein yjgC 1783984 - 1783079 - | LysR family transcriptional regulator TERM 2396 1783392 - 1783373 - G 76 -2.7 -5.03314 | opp_overlap 1783388 1783390 CTCACGCGTAAAAAA CCAGTCG GTGGTA CGCCCGG TGCGGTGGTTCAGGT mppA 1786744 - 1784843 - | periplasmic murein tripeptide transport protein, also negative regulator of mulitple antibiotic resistance ycjI 1786934 - 1787662 + | murein peptide amidase A ycjG 1788602 - 1787637 - | putative chloromuconate cycloisomerase (muconate cycloisomerase) TERM 2397 1788280 - 1788251 - G 76 -5 -4.72272 | gap 3, opp_overlap 1788262 GCGCGGTAGTAAAAA CCGGG--GC-CAGCG TCA CGCCGAGCAGCCCGG CAAGGCTTTGCTGCC tpx 1788718 - 1789224 + | thiol peroxidase TERM 2398 1789240 - 1789225 - T 77 -10.4 -3.41878 | opp_overlap 1789226 1789226 1789227 1789229 1789229, overlap 1789229 GTCCTGAAGGCATAA GCCAGC GCCT GCTGGC GCTACGTTTGTCAGT TERM 2399 1789306 - 1789283 - T 81 -12.5 -3.28712 | opp_overlap 1789283, overlap 1789286 GCTCTTTTGTCACAA GAAGGCCTC TATCCG GAGGCCTTC TTTTTTCTACTCTTC TERM 2400 1789283 - 1789306 + T 100 -13.2 -5.36965 | opp_overlap 1789283 1789286 GCTCTTTTGTCACAA GAAGGCCTCT ATCC GGAGGCCTTC TTTTTTCTACTCTTC TERM 2401 1789303 - 1789286 - T 72 -8.4 -3.78934 | opp_overlap 1789283, overlap 1789283 CTTTTGTCACAAGAA GGCCTC TATCCG GAGGCC TTCTTTTTTCTACTC tyrR 1790854 - 1789313 - | DNA-binding transcriptional regulator TyrR ycjF 1792063 - 1791002 - | hypothetical protein ycjX 1793463 - 1792060 - | putative ATPase TERM 2402 1792871 - 1792897 + g 77 -7.2 -4.25283 | gap 1, opp_overlap 1792866 1792865 TGCAAATAATCCGTC CAGGC-GGCGG CAATCT CCGCCAGCCGG TTTTCATCGGCGGGT TERM 2403 1793509 - 1793494 - R 71 -3.3 -4.84921 | GAGAAGAAAAAATAA TAACG AGCCTG CGTTA TAGATATGTGCAAAA TERM 2404 1793574 - 1793558 - R 83 -10.8 -3.80018 | opp_overlap 1793555 CGGAGAGATCAACAA CGGCGC ATTAA GCGCCG CGGTTAGTATGAGTA pspE 1793920 - 1793606 - | thiosulfate:cyanide sulfurtransferase (rhodanese) pspD 1794181 - 1793996 - | peripheral inner membrane phage-shock protein pspC 1794596 - 1794237 - | DNA-binding transcriptional activator PspC pspB 1794820 - 1794596 - | phage shock protein B pspA 1795548 - 1794880 - | phage shock protein PspA TERM 2405 1795473 - 1795485 + g 89 -9.1 -4.56597 | GGCGCACCAGCTTCT GCGGA TCT TCCGC TTTTTCCAACAACGC TERM 2406 1796614 - 1796586 - g 83 -6.1 -4.87626 | gap 1, opp_overlap 1796587, overlap 1796587 CTGCAACAGGAAAAA GCGCTGCTGCAA CGTAGC TTACAGCAG-GC GAAATTTAACCAGAA pspF 1795719 - 1796699 + | phage shock protein operon transcriptional activator sapA 1796787 - 1798460 + | peptide ABC transporter periplasmic-binding protein TERM 2407 1798929 - 1798919 - g 71 -8.2 -3.78329 | opp_overlap 1798919 CTTTATGAAGTTAAA CCGG TTA CCGG TTTCGCCATCATTGA sapB 1798457 - 1799422 + | peptide ABC transporter TERM 2408 1799690 - 1799714 + G 85 -11.3 -3.96624 | CCGCCTGTTAAGCGG CGCGGCGCCCA CGG TCGGCGGCGCG TTTATCGTAACGCTG sapC 1799409 - 1800299 + | peptide ABC transporter sapD 1800299 - 1801291 + | peptide ABC transporter ATP-binding protein TERM 2409 1801760 - 1801788 + G 80 -8.7 -4.09685 | opp_overlap 1801761, overlap 1801761 1801763 1801786 GGCGCCGGGGCAGAA ACAGCGTCTGGGC CTG GCCCGCGCGCTGA TTTTACGCCCTAAAG TERM 2410 1801761 - 1801787 + G 76 -12.2 -3.05597 | opp_overlap 1801761, overlap 1801760 1801763 1801786 GCGCCGGGGCAGAAA CAGCGTCTGGGC CTG GCCCGCGCGCTG ATTTTACGCCCTAAA sapF 1801293 - 1802099 + | peptide ABC transporter ATP-binding protein ydiV 1802822 - 1802115 - | hypothetical protein TERM 2411 1802911 - 1802888 - R 73 -2.4 -5.20534 | ATCAATCAATAAAAA CGATCAATAT ATAA AAAATGATCG AAAAAAACAATATAT SC1691 1804661 - 1803288 - | hypothetical protein SC1692 1804696 - 1804875 + | putative e6 protein ycjE 1804850 - 1805149 + | putative cytoplasmic protein fabI 1805267 - 1806055 + | enoyl-(acyl carrier protein) reductase TERM 2412 1806903 - 1806888 - g 73 -10.4 -3.3247 | opp_overlap 1806887, overlap 1806886 AACCCCCAGACAACA TGGCGG CCCG CCGCCA GTCTGGTAGAATATT yciW 1806255 - 1807175 + | putative cytoplasmic protein TERM 2413 1807260 - 1807270 + F 70 -2.4 -5.03715 | GCGCCCGATCGCTTT AGCG CCG CGCA TTTTTTCCCGCTACT TERM 2414 1807378 - 1807366 - f 72 -4.8 -4.60924 | TAAATCGTTTAAAAA TCGC GTTGG GCGA AACCTATTAACTCAT TERM 2415 1808359 - 1808373 + G 80 -4.2 -5.00616 | overlap 1808361 GCAGACGGCACCATT GACGAT GAT ATCGCC TTTTTTGCGGCCACC rnb 1807477 - 1809411 + | exoribonuclease II TERM 2416 1809431 - 1809457 + F 100 -14.5 -4.96427 | GCTTAGCTCGCTCAA CGGCCTTTGCT GAGAA GGCAAAGGCCG TTTCTTTTCTTCTTC TERM 2417 1810138 - 1810187 + G 100 -10.2 -5.42259 | opp_overlap 1810138 1810141, overlap 1810148 CAAAGCGTCTTTAAA TTATTTATG-AGTCGCCGGGAGGC GGTT GCCTCCCGGC-ACTACATTGAGAA TTTTTTTCGCAATGG TERM 2418 1810148 - 1810176 + G 89 -16.8 -2.54655 | gap 1, opp_overlap 1810141 1810138, overlap 1810138 TTAAATTATTTATGA GTCGCCGGGAGGC GGTT GCCTCCCGGC-AC TACATTGAGAATTTT TERM 2419 1810828 - 1810843 + G 77 -3.9 -5.00616 | GCTAAAGAAGGCGGC CGCGG TCAGTT CTGCG TTTTTTCGCCGGAAA yciR 1809673 - 1811655 + | RNase II stability modulator SC1698 1811744 - 1811956 + | hypothetical protein TERM 2420 1812273 - 1812262 - g 74 -7.2 -4.18058 | AACTACACGCTAAAA CGCC GACT GGCG GAGTTCGCCGCCTCG TERM 2421 1812409 - 1812370 - g 74 -2.3 -5.06414 | gap 2, overlap 1812372 CTGGCGGAACAAAAA GATGTCACGATCATCACCG TGAG CAGTTAT-ATCGCG-CATC TGCTCAAAGAAACCC yciT 1812043 - 1812795 + | DeoR family transcriptional regulator osmB 1813054 - 1813272 + | lipoprotein TERM 2422 1813360 - 1813385 + T 100 -11.9 -4.4078 | CAAAGTTGACTTTTA CGCCACGGT AATTTACA ACCGTGGCG TTTTCATTAGCCGCC yciH 1813718 - 1813392 - | translation initiation factor Sui1 pyrF 1814455 - 1813718 - | orotidine 5'-phosphate decarboxylase TERM 2423 1814136 - 1814108 - G 91 -14.5 -3.06183 | opp_overlap 1814108 1814105 CGCATCTTTACCGAA TGGCGCCAGCGCG TCG CGCGCTGCGGCCA TCATTCTCGCCCCGC TERM 2424 1814108 - 1814136 + g 83 -14.5 -2.82623 | opp_overlap 1814108, overlap 1814105 CGCATCTTTACCGAA TGGCGCCAGCGCG TCG CGCGCTGCGGCCA TCATTCTCGCCCCGC TERM 2425 1814576 - 1814589 + r 73 -4.5 -4.73973 | ATAAGCCCTAGTCGC CGATG CTAG CGTCG TTTCTTGTTTTATGT yciM 1815815 - 1814646 - | hypothetical protein TERM 2426 1815675 - 1815731 + g 76 -3.2 -5.09762 | gap 2 ATCTTGTTGGTTACT CAGCAGGAAGTTAACC-CCTG-CG ACATAATCGCG CGACAGGCGGTTAGCTTCATCCTG TTTTGTTTGTTGCGC yciS 1816130 - 1815822 - | hypothetical protein pgpB 1817044 - 1816280 - | phosphatidylglycerophosphatase B ribA 1817240 - 1817830 + | GTP cyclohydrolase II acnA 1820561 - 1817886 - | aconitate hydratase TERM 2427 1818267 - 1818277 + g 100 -8.2 -5.19212 | opp_overlap 1818266 TTTCCCGGCAATTAC CGCC AGC GGCG TTTTTTCCTGCTGGT TERM 2428 1818668 - 1818631 - G 70 -5.6 -4.49958 | gap 1 ATTTCATCAAAGAAA GGC-GACAGGCGGAT ATAGGTTGA ATCCGACTGCCAGCC GTAGGTATCGGACGA TERM 2429 1820306 - 1820292 - G 71 -10 -3.54543 | AGGCACGCCGGTAAA GTCCTG CAT CAGGAC ACGGGCGGGCCGCCA TERM 2430 1820708 - 1820733 + r 72 -9.1 -3.55622 | opp_overlap 1820708 AACGAAGATGAAAAA GCCCGATAA ATAACGCA TTATCGGGC TTTGACGAGATTAGA TERM 2431 1820733 - 1820708 - R 93 -9.1 -4.90136 | opp_overlap 1820708 AACGAAGATGAAAAA GCCCGATAA ATAACGCA TTATCGGGC TTTGACGAGATTAGA SC1708 1821116 - 1820946 - | hypothetical protein yciX 1821302 - 1821117 - | hypothetical protein cysB 1822512 - 1821538 - | transcriptional regulator CysB TERM 2432 1822895 - 1822878 - R 100 -14.1 -5.37043 | opp_overlap 1822876 AGGGTATATAAAAAA GGGCCGC TTAC GCGGCCC GCTTGACTACAGTGG topA 1825521 - 1822924 - | DNA topoisomerase I TERM 2433 1823939 - 1823957 + g 76 -3.1 -5.03314 | overlap 1823941 TTTTCTTCCAGCCGA TCGGTGA CGATT TCACCCA TTTTTTCCGCATAGA TERM 2434 1824600 - 1824611 + g 71 -4.4 -4.63218 | opp_overlap 1824591 CATACAGACGCTGCG CCAT CATC ATGG TTTTCTTCACGCCAA TERM 2435 1826140 - 1826105 - g 74 -7.7 -4.11692 | gap 1, opp_overlap 1826104, overlap 1826131 TACCGACCCCTAAAA GCACCGCGGTGTTTAA CATGT TTAAACACCT-GGCGC ATGTGCTGTCTGAGA yciN 1825924 - 1826175 + | hypothetical protein TERM 2436 1826208 - 1826180 - T 90 -16.1 -2.56596 | opp_overlap 1826176 1826190, overlap 1826176 TGGTGGATTAATCCA TGCCGGATGGC GCTGAAT GCCATCCGGCA ATAGCGGTTTACATC sohB 1827263 - 1826217 - | putative periplasmic protease TERM 2437 1827662 - 1827645 - g 77 -7.7 -4.2772 | gap 1 CGCAACGAAGAGAAA CTGCGTCG GGT CG-CGCAG CACATTGCTGACGAG yciK 1827501 - 1828262 + | short chain dehydrogenase TERM 2438 1828708 - 1828692 - g 73 -10.8 -3.3676 | TGGAAGAGGTCATAA GCGCGC TAAAC GCGCGC CCTGGTCACCAGACG btuR 1828259 - 1828849 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 2439 1828895 - 1828866 - T 74 -10.8 -3.14931 | gap 1, opp_overlap 1828864 1828867, overlap 1828851 CGTAGGCCGGATTAA GGCGTTTGCGCCG CCATC CGGCACAAAC-CC TCTTGTCTGATGATC TERM 2440 1828867 - 1828895 + T 70 -8.8 -3.35616 | opp_overlap 1828851 1828866, overlap 1828864 GTAGGCCGGATTAAG GCGTTTGCGCCG CCATC CGGCACAAACCC TCTTGTCTGATGATC yciL 1829811 - 1828936 - | 23S rRNA pseudouridylate synthase B TERM 2441 1829123 - 1829145 + g 74 -10.4 -3.53091 | GCGAGGTCGAGCTCA GTCCAGCCGC CGC GCGGCAGGCC TTTCGGCAGCGGGAT TERM 2442 1829693 - 1829708 + g 80 -9 -4.13767 | opp_overlap 1829693 1829690 GTGACTTCAACACGA TCGCCA AGCG TGGCGA TTTTACCGTCAACGC TERM 2443 1829861 - 1829878 + r 76 -8.3 -4.07885 | opp_overlap 1829857 1829861 1829862, overlap 1829862 1829872 GAACAGGAGAATGAA CGGCGCG TTGC CGCGCCA TTTTAAGGCCGCGTA TERM 2444 1829878 - 1829861 - R 79 -10.5 -3.49851 | opp_overlap 1829861 1829862 1829872, overlap 1829857 1829862 GAACAGGAGAATGAA CGGCGCG TTGC CGCGCCA TTTTAAGGCCGCGTA TERM 2445 1829862 - 1829877 + r 78 -11.8 -3.04517 | opp_overlap 1829861 1829857 1829862, overlap 1829861 1829872 AACAGGAGAATGAAC GGCGCG TTGC CGCGCC ATTTTAAGGCCGCGT TERM 2446 1829877 - 1829862 - R 76 -11.8 -2.69188 | opp_overlap 1829862 1829861 1829872, overlap 1829861 1829857 AACAGGAGAATGAAC GGCGCG TTGC CGCGCC ATTTTAAGGCCGCGT yciO 1830532 - 1829912 - | hypothetical protein trpH 1831421 - 1830540 - | trpR controlled transcriptional unit in the 5' upstream region of the trp operon TERM 2447 1831014 - 1830972 - G 74 -8.3 -3.9712 | gap 1, overlap 1830973 GCACTCCACCAGAAA GCGGGCGAAGTGGCCGCGCG TCAC CGCGCCGCCA-TTGGCCAGT CTCAATGCCCCTTCC TERM 2448 1831013 - 1830973 - G 75 -11.8 -2.97951 | gap 1, overlap 1830972 CACTCCACCAGAAAG CGGGCGAAGTGGCCGCGCG TCAC CGCGCCGCCA-TTGGCCAG TCTCAATGCCCCTTC TERM 2449 1831633 - 1831651 + H 100 -10.2 -5.75342 | GCCAAACGATACCCG GCCCGCCT GTT AAGCGGGC TTTTTTTTGAACAAA trpE 1831682 - 1833244 + | anthranilate synthase component I TERM 2450 1834366 - 1834349 - g 70 -2.7 -4.74706 | gap 1, overlap 1834350 1834351 GCCAACAGTTAAAAA CGC-GAAC CCT GTTCAACG TACTCGGCCCGCTGA TERM 2451 1834665 - 1834647 - g 71 -4.4 -4.63932 | opp_overlap 1834647 CACGCCGGAAGAAAA CCGTGACA TTC TGACGCGG TTATTACAAGGTAAA trpD 1833244 - 1834839 + | bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase TERM 2452 1835230 - 1835243 + G 71 -8.1 -3.81287 | CTTGCCCGTTACTAT CAGGC CGAT GCCTG TTTACTGATGCTCTC TERM 2453 1836141 - 1836163 + G 70 -9.8 -3.34236 | opp_overlap 1836127, overlap 1836143 AGGTGTGGAGTCACA GCCGGGCATC AAA GATGCTCGTC TTCTGGCCTCAGTTT TERM 2454 1836143 - 1836161 + G 74 -11 -3.23572 | overlap 1836141 GTGTGGAGTCACAGC CGGGCATC AAA GATGCTCG TCTTCTGGCCTCAGT trpC 1834843 - 1836201 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase trpB 1836211 - 1837404 + | tryptophan synthase subunit beta trpA 1837404 - 1838210 + | tryptophan synthase subunit alpha TERM 2455 1838219 - 1838241 + F 81 -12.7 -3.18912 | opp_overlap 1838193 1838211 CGCATAACGGGTTAA GCCGTCAGC ATAAC GCTGGCGGC TTAATGAGTGGCTGG TERM 2456 1838537 - 1838527 - f 72 -2.6 -5.09259 | opp_overlap 1838527, overlap 1838522 TATTCTAAAAGAAAA TATA GAA TATA TTATCTCTAAACCAT TERM 2457 1838642 - 1838655 + F 70 -2.3 -5.00616 | overlap 1838643 TAATAGGGTGTCGAC ACGGT TAAA ACCGA TTTTTTCAGCAAGCA yciG 1838690 - 1838872 + | putative cytoplasmic protein TERM 2458 1839389 - 1839377 - g 70 -5.5 -4.42464 | overlap 1839378 AACTGCTCAAAGAAA CCCTC GAC GAGGA AAAACAAACTGATTT yciF 1838962 - 1839465 + | hypothetical protein yciE 1839539 - 1840045 + | hypothetical protein ctjC 1840065 - 1840943 + | hypothetical protein TERM 2459 1840982 - 1841000 + T 100 -16 -5.14563 | GTCATGTCCTTTTTT GACCCCGC CTG GCGGGGTC TTTTTTCGTCACAAC ompW 1841663 - 1841025 - | outer membrane protein W TERM 2460 1841741 - 1841723 - H 74 -8.2 -3.86634 | opp_overlap 1841722 1841723 1841734 ACAATGAAGTAATAA GTGATCTA ACA CAGATCAC ATTTGTTCTTATAAT TERM 2461 1842173 - 1842163 - g 74 -3.2 -4.90266 | opp_overlap 1842168 GGTACCAACCAAAAA CAGC CGC ACTG TAAAGCGCTAATTGG ykgJ 1842001 - 1842405 + | hypothetical protein yciC 1842431 - 1843174 + | hypothetical protein TERM 2462 1843205 - 1843176 - f 72 -10.8 -2.77344 | gap 1, opp_overlap 1843193, overlap 1843175 TGATTCGCCAATAAT CCGCAATGCGCCG TTACG CGGCGCATT-CGA CGCTCGTTGATGATG TERM 2463 1843309 - 1843342 + G 85 -11.1 -3.92869 | gap 1, opp_overlap 1843295, overlap 1843298 1843295 1843312 ATCTATGCGGCGACC TCCGCACTGATTGTCG CGA CGGCAATC-GTGCTGA TTTATAGCTGGGTGC TERM 2464 1843312 - 1843339 + G 72 -11.4 -3.02745 | gap 1, opp_overlap 1843295, overlap 1843298 1843295 1843309 TATGCGGCGACCTCC GCACTGATTGTCG CGA CGGCAATC-GTGC TGATTTATAGCTGGG TERM 2465 1843592 - 1843605 + G 85 -2.3 -5.4833 | GGTCAAAGCTGAACC TGGCG TGGG CGCTG TTTTTTATTGCGTGC yciB 1843231 - 1843770 + | intracellular septation protein A TERM 2466 1844260 - 1844272 + G 70 -3.3 -4.68511 | ACAGCGCTACAAGGC CACCG AGG CGCTG TTTATTTATGTTGCC yciA 1843931 - 1844332 + | acyl-CoA thioester hydrolase tonB 1845236 - 1844391 - | transport protein TonB yciI 1845337 - 1845633 + | YciI-like protein TERM 2467 1845649 - 1845668 + F 100 -15 -3.91897 | opp_overlap 1845638 1845640 1845637 AAAGGATGGCCTGTT GGGCACCG CATA CGGTGCCC TTTCTGGCTCACACA cls 1845993 - 1847453 + | cardiolipin synthetase yciU 1847487 - 1847816 + | dsDNA-mimic protein cikL 1848700 - 1847864 - | putative voltage-gated potassium channel TERM 2468 1848741 - 1848721 - R 95 -12.6 -4.21812 | opp_overlap 1848717 1848716 CCTCACCTAAAAGAA GGGCTGAC GAATT GTCAGCCC TTGCGATTATAACGG oppF 1849752 - 1848748 - | oligopeptide ABC transporter ATP-binding protein oppD 1850756 - 1849749 - | oligopeptide transporter ATP-binding component oppC 1851676 - 1850768 - | oligoeptide ABC transporter TERM 2469 1851644 - 1851656 + g 100 -9.1 -5.1963 | TTCACTGAAATTTTC CAGCG TCT CGCTG TTTTTCTTACTTAAC oppB 1852611 - 1851691 - | oligopeptide transporter permease TERM 2470 1852345 - 1852301 - G 78 -2 -5.14965 | gap 2, opp_overlap 1852338, overlap 1852287 1852302 1852303 ACCGCCAGCAAAAAA GCGGCGGCGCCAAGTTTCGCCG AAA CGGGGAAGCT-GGCGGCAAC-C AGATCGTTGACCGTG TERM 2471 1852729 - 1852694 - R 82 -5.4 -5.14965 | opp_overlap 1852699 1852701, overlap 1852696 1852698 1852699 1852701 AGTGCGATGAAAAAA GACACCATGGGACAAC CGCA GTTGTCCCATGTCTTG CCATTAATGTTTGAT TERM 2472 1852727 - 1852696 - R 76 -8 -4.20707 | opp_overlap 1852699 1852701, overlap 1852694 1852698 1852699 1852701 TGCGATGAAAAAAGA CACCATGGGACAAC CGCA GTTGTCCCATGTCT TGCCATTAATGTTTG TERM 2473 1852725 - 1852698 - R 93 -12.8 -3.69447 | opp_overlap 1852699 1852701, overlap 1852696 1852694 1852699 1852701 CGATGAAAAAAGACA CCATGGGACAAC CGCA GTTGTCCCATGT CTTGCCATTAATGTT TERM 2474 1852699 - 1852724 + r 93 -16.3 -3.10732 | opp_overlap 1852698 1852696 1852694 1852699 1852701, overlap 1852701 GATGAAAAAAGACAC CATGGGACAAC CGCA GTTGTCCCATG TCTTGCCATTAATGT TERM 2475 1852724 - 1852699 - R 93 -16.3 -2.80583 | opp_overlap 1852699 1852701, overlap 1852698 1852696 1852694 1852701 GATGAAAAAAGACAC CATGGGACAAC CGCA GTTGTCCCATG TCTTGCCATTAATGT TERM 2476 1852722 - 1852701 - R 82 -13.1 -2.92912 | opp_overlap 1852699 1852701, overlap 1852699 1852698 1852696 1852694 TGAAAAAAGACACCA TGGGACAAC CGCA GTTGTCCCA TGTCTTGCCATTAAT TERM 2477 1852701 - 1852722 + r 82 -13.1 -3.10879 | opp_overlap 1852701 1852699 1852698 1852696 1852694, overlap 1852699 TGAAAAAAGACACCA TGGGACAAC CGCA GTTGTCCCA TGTCTTGCCATTAAT oppA 1854481 - 1852733 - | oligopeptide ABC transporter periplasmic-binding protein TERM 2478 1853881 - 1853899 + g 74 -2.4 -5.00884 | gap 1, overlap 1853881 CATCAAGCGCTTTTA CCC-CCA GATCGG TGGCGGG TTTTTTACCGGCGAT TERM 2479 1855108 - 1855086 - R 100 -16.2 -3.36492 | GTGGGAATGTCACAA GGCGGCCCCC TTA GGGCGCCGCC TGTAAATCAACAGGT ychE 1855777 - 1855130 - | hypothetical protein TERM 2480 1855704 - 1855690 - G 77 -7.8 -4.26076 | overlap 1855691 1855700 TCATGCTGATGAAAA CGGGGA TAA TCCCCA CCGGGTTAACCAGCG TERM 2481 1857136 - 1857120 - g 71 -4.3 -4.59773 | overlap 1857121 CGTTATCCTGAAAAA TGGCGCT CTG AACGCCG CTATCGTCGGCCAGC adhE 1856254 - 1858932 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2482 1858927 - 1858916 - T 83 -2.2 -5.75478 | AAGCAGAGAAAAAAA CGAA AAAA TCCG CTTAATTCGTTATCT TERM 2483 1858978 - 1858961 - T 95 -12.7 -3.85864 | opp_overlap 1858961 TTAGCATGACAATAA CGGCCTC AATT GAGGCCG TTTTTTTGTTTTACC TERM 2484 1858961 - 1858978 + T 100 -12.7 -6.09196 | opp_overlap 1858961 TTAGCATGACAATAA CGGCCTC AATT GAGGCCG TTTTTTTGTTTTACC tdk 1859746 - 1859129 - | thymidine kinase TERM 2485 1860745 - 1860731 - g 78 -7.1 -4.55128 | opp_overlap 1860740 ACGGTGAAACTAAAA CCTGG ACTGG CCAGG GTCGTACACCGGCTG hns 1860409 - 1860822 + | global DNA-binding transcriptional dual regulator H-NS TERM 2486 1860845 - 1860861 + T 100 -13.7 -5.86965 | opp_overlap 1860845 CCTGGATGCTTAAAA TCCCGCC GCT GGCGGGA TTTTTTTTCCTGAGT TERM 2487 1860861 - 1860845 - T 100 -13.7 -4.11216 | opp_overlap 1860845 CCTGGATGCTTAAAA TCCCGCC GCT GGCGGGA TTTTTTTTCCTGAGT TERM 2488 1860925 - 1860907 - T 100 -9.5 -5.64274 | opp_overlap 1860907 CCAGGCATAAAAAAA GCGCCGG ATTTA CCAGCGC TTCTGTTAAAAAATT galU 1861861 - 1860953 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalU hnr 1863077 - 1862064 - | response regulator of RpoS TERM 2489 1862790 - 1862808 + g 71 -4.5 -4.66537 | overlap 1862792 CCCAAGGCGTAACGC TTTGGCG ATATC CGCCATA TTTTCTGTTGCGGAA ychK 1864073 - 1863168 - | hypothetical protein TERM 2490 1864145 - 1864159 + H 100 -7.8 -5.47159 | opp_overlap 1864138 1864137, overlap 1864146 AACATAATGCCACCC TGGCGT TCA ACGCCG TTTTTTATATTCAGG TERM 2491 1864146 - 1864158 + H 77 -9.1 -3.87211 | opp_overlap 1864138 1864137, overlap 1864145 ACATAATGCCACCCT GGCGT TCA ACGCC GTTTTTTATATTCAG ychJ 1864184 - 1864642 + | hypothetical protein purU 1864693 - 1865535 + | formyltetrahydrofolate deformylase TERM 2492 1865646 - 1865675 + TF 70 -10 -3.06261 | gap 1, opp_overlap 1865644 TCATTTGATATGATG C-GCCCCGCTTCC CGAAA GGAAGCGGGCCAG TATTAAGCATTACCC TERM 2493 1865912 - 1865896 - Tf 93 -12.3 -3.80094 | GCGAAAGCAAGAGAA CGTTGCC AAC GGCAACG GCCCGTAGGGTGAGG TERM 2494 1866206 - 1866188 - Tf 77 -8.8 -3.92373 | overlap 1866189 1866204 GAGCGCAGCGAGAAA GCGTTGCC GCA GGCAACGA CCCGAAGGGCGAAGC TERM 2495 1866205 - 1866189 - Tf 80 -12.3 -2.95102 | overlap 1866188 1866204 AGCGCAGCGAGAAAG CGTTGCC GCA GGCAACG ACCCGAAGGGCGAAG TERM 2496 1866381 - 1866363 - Tf 79 -8.8 -4.02534 | overlap 1866364 AGCGAAAGCGAGAAA GCGTTGCC AAC GGCAACGA CCCGAAGGGCGAAGC TERM 2497 1866380 - 1866364 - Tf 80 -12.3 -3.00797 | overlap 1866363 GCGAAAGCGAGAAAG CGTTGCC AAC GGCAACG ACCCGAAGGGCGAAG TERM 2498 1866555 - 1866537 - Tf 77 -8.8 -3.92373 | overlap 1866538 1866553 GAGCGCAGCGAGAAA GCGTTGCC GCA GGCAACGA CCCGAAGGGCGAAGC TERM 2499 1866554 - 1866538 - Tf 80 -12.3 -2.95102 | overlap 1866537 1866553 AGCGCAGCGAGAAAG CGTTGCC GCA GGCAACG ACCCGAAGGGCGAAG ybeQ 1868235 - 1866706 - | TPR repeat-containing protein TERM 2500 1868001 - 1868019 + gF 71 -7.4 -3.96892 | overlap 1868004 GTTTACCCGCTTTCT CCAGCCAT TTT ATGGCTAG TTTATAATCAGGCTT SC1754 1868220 - 1868435 + | hypothetical protein TERM 2501 1868456 - 1868441 - TR 100 -8.2 -5.65177 | opp_overlap 1868441 ACAGCCATAAAAAAA CCCCGC CGAA GCGGAG TTTAGGGCATCGAGA narI 1869154 - 1868477 - | nitrate reductase 1, cytochrome b(NR), gamma subunit narJ 1869864 - 1869154 - | nitrate reductase 1, delta subunit, chaperone required for molybdenum cofactor assembly in nitrate reductase 1 TERM 2502 1869748 - 1869732 - G 86 -10.1 -4.25848 | opp_overlap 1869732 1869727, overlap 1869733 AATCGCGCAGGAAAA CGCCCAG AGT CTGGGCA TCCTCTTTATCCAGG TERM 2503 1869747 - 1869733 - G 72 -11.4 -3.15027 | opp_overlap 1869732 1869727, overlap 1869732 ATCGCGCAGGAAAAC GCCCAG AGT CTGGGC ATCCTCTTTATCCAG narH 1871396 - 1869861 - | nitrate reductase 1, FeS (beta) subunit TERM 2504 1871012 - 1871040 + g 74 -9.6 -3.62354 | gap 1, opp_overlap 1871015, overlap 1871010 TCCGCTGGCCGGTAA TCAG-CGAGCGCG GACG CGCGATCGGCTGA TGTTTGCTTTCCGGC TERM 2505 1871142 - 1871177 + g 79 -11 -3.71108 | AGCAAAGATTTTTCC CAGCAGCAGCGCACGG TTAC CCATGCGCGGTTGCAG TTTACCGTTGATTTT TERM 2506 1871299 - 1871313 + g 73 -5.6 -4.60041 | TATTCCATACCTTCG CGACTG GTC CAGACG TTTTTACAGGTGACT narG 1875136 - 1871393 - | nitrate reductase 1, alpha subunit TERM 2507 1872735 - 1872722 - G 74 -6.7 -4.25056 | opp_overlap 1872726 CAGCGGATGAATAAA CGGAT GCAT ATCCG AGGTATTCATATCGT TERM 2508 1873376 - 1873387 + g 78 -5.8 -4.72272 | opp_overlap 1873355, overlap 1873360 CGGCTGCCAGCCGGT CTGC GGAC GCAG TTTTTCCTGGCCGAC TERM 2509 1873992 - 1874013 + g 84 -8.7 -4.27584 | GGCGCCACCATTTCA CCGTTGCTG TTGA TAGCGACGG TTTTCCATTCCGGGT TERM 2510 1874850 - 1874869 + g 73 -10.6 -3.33037 | overlap 1874843 CAGGAGTAGCTTGCG CCGCGCGG GCAG CCGCGAGG TTCATGGTTTGGCAT TERM 2511 1875117 - 1875086 - G 74 -10.3 -3.57144 | gap 1, opp_overlap 1875080 GTGCCCATCGGCAAA GGTTTCGCC-CTTC TGCTT GAAGTAGCGAAACC GGTCCAGGAATTTAC TERM 2512 1875282 - 1875299 + r 76 -4.1 -5.07523 | opp_overlap 1875271, overlap 1875271 1875280 CAAACCTCCTGCATA CTCCTTT TGGA GGAGGAG TTTTATTTATATATA TERM 2513 1875507 - 1875489 - R 100 -8.8 -6.06723 | GCGGGTAAAAAAAAA GCGCGG TCTAACG CCGCGC AAAGGATAATCAAAA narK 1876957 - 1875524 - | major facilitator superfamily nitrite extrusion protein TERM 2514 1875682 - 1875668 - G 89 -2.7 -5.4505 | overlap 1875669 TTTCGGAATAAAAAA GCCGC CAATC GCGCC AATCGCGGAAATAAA TERM 2515 1876065 - 1876040 - G 70 -3.3 -4.69027 | gap 1, overlap 1876047 AAACGGACCGAAAAA CGCATAATGCAG GAT CTGCA-CATCCG GGAATTGCGTTTTAG TERM 2516 1876420 - 1876436 + g 72 -2.1 -4.86731 | overlap 1876421 1876435 GACCACCGTTCAGAC CCAGCGC GCC GCCCTGC TTTTGTTTAGGAAAG TERM 2517 1877854 - 1877899 + G 70 -9.7 -3.33492 | GTCAGCGCGACTTTA CCCAACGTGCCAATATCAGTG GACG CAATGAGATGGCCGCGTTGGG TTCTGCGCTCAATAA narX 1877262 - 1879058 + | nitrate/nitrite sensor protein NarX narL 1879051 - 1879701 + | transcriptional regulator NarL ychP 1881231 - 1879702 - | hypothetical protein ychN 1881303 - 1881656 + | hypothetical protein chaB 1881966 - 1881736 - | cation transport regulator TERM 2518 1882438 - 1882455 + G 70 -6.9 -4.18908 | overlap 1882445 1882448 TAGCGCACCGACTCG GCGAACC CTAC GGATCGC TTATTTTAAGCCTGT TERM 2519 1882764 - 1882784 + G 81 -3.9 -5.1963 | overlap 1882766 TTGGTCGCGTTAATT TCCGCCG CGATGTA CGGCGTA TTTTTGTTGATTCAA TERM 2520 1882766 - 1882782 + G 70 -6.5 -4.21997 | overlap 1882764 GGTCGCGTTAATTTC CGCCG CGATGTA CGGCG TATTTTTGTTGATTC chaA 1882233 - 1883333 + | calcium/sodium:proton antiporter TERM 2521 1883364 - 1883343 - T 100 -10.2 -5.36441 | GCCTGATATAAAAAA GCCGGATA GTATCT TATCCGGC CTACACAAGCTAAAA kdsA 1884241 - 1883387 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2522 1884110 - 1884094 - G 73 -10.9 -3.406 | TGAACACGTAAGGAA TACCCAG CTT CTGGGTA ACGGTTACGTAGTGC ychA 1885088 - 1884279 - | putative transcriptional regulator TERM 2523 1884797 - 1884809 + g 74 -2.6 -5.03747 | CGCCCAACGATACCG CGCT CCCCT GGCG TTTTTTCAGGACTTT sirC 1885481 - 1885092 - | putative transcriptional regulator TERM 2524 1885190 - 1885174 - G 73 -5.8 -4.51196 | gap 1 GGGAAAGCGATAAAA CGC-GCC TGTT GGCTGCG CGCCTGACGATAATC hemK 1886311 - 1885478 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase prfA 1887393 - 1886311 - | peptide chain release factor 1 TERM 2525 1886557 - 1886592 + g 82 -5.2 -4.98911 | overlap 1886536 TGCCGTTTCGGCGGC GTGAATGCGCGCCCCG AGCA CCGAGAGCGCTTTCGC TTTGTTTTTATGCTG hemA 1888690 - 1887434 - | glutamyl-tRNA reductase lolB 1889004 - 1889627 + | outer membrane lipoprotein LolB TERM 2526 1890012 - 1890055 + G 71 -6.1 -4.24342 | gap 3, opp_overlap 1890014, overlap 1890014 GGCTTTCCATTGATG AACTGGCGACGCTCGGC-CTGA CGC TCGGCGCCGA-CGTC-CCGGTC TTTGTTCGTGGCCAC TERM 2527 1890014 - 1890053 + G 70 -8.7 -3.72374 | gap 3, opp_overlap 1890014, overlap 1890012 CTTTCCATTGATGAA CTGGCGACGCTCGGC-CTGA CGC TCGGCGCCGA-CGTC-CCGG TCTTTGTTCGTGGCC ipk 1889624 - 1890475 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2528 1890610 - 1890624 + F 75 -10 -3.62522 | GGCAAGCTGAGCTTC GGTGAC AAC GTCACC TTGTTCCAGACGTTG prsA 1890675 - 1891688 + | ribose-phosphate pyrophosphokinase TERM 2529 1891707 - 1891720 + F 100 -9.5 -5.76633 | opp_overlap 1891707 AACCCGGATCTGAAA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA TERM 2530 1891720 - 1891707 - f 75 -9.5 -3.60475 | opp_overlap 1891707 AACCCGGATCTGAAA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA TERM 2531 1892643 - 1892657 + G 71 -7.8 -3.92075 | GGATTCACTGCGCGC GCTGCT GCC AGCGGC TTTCTCAATGGCAAT ychM 1891813 - 1893498 + | putative sulfate transporter YchM ychH 1893821 - 1893543 - | hypothetical protein TERM 2532 1893954 - 1893926 - H 77 -9.1 -3.96148 | GGTTGCGATCACAAA TGTAAAGTTTCAT TTA ACAAAACTTTACA AATAACACACTGAAC pth 1894073 - 1894681 + | peptidyl-tRNA hydrolase TERM 2533 1894686 - 1894713 + F 70 -9.8 -2.94099 | opp_overlap 1894685 1894683 AGGCGCAATAACCAG TGATGTGCGGCA TTTT TGCCGCACGCCG TGTATAATAGGCGAA ychF 1894798 - 1895889 + | translation-associated GTPase TERM 2534 1895952 - 1895969 + F 100 -11.3 -5.01811 | opp_overlap 1895952 TAAAACTCTATAAAA TCCACGC AATG GCGTGGA TTTTTCATTTCATAA TERM 2535 1895969 - 1895952 - f 95 -11.3 -4.46581 | opp_overlap 1895952 TAAAACTCTATAAAA TCCACGC AATG GCGTGGA TTTTTCATTTCATAA SC1779 1896582 - 1896923 + | hypothetical protein TERM 2536 1897320 - 1897347 + F 95 -2.7 -5.85244 | overlap 1897324 AAATGTTTCAGAATT CAGGCGAAGTG ATTATG TACTTCGGTTG TTTTTTATTTTCCTT SC1780 1897458 - 1897763 + | hypothetical protein SC1781 1899504 - 1898239 - | putative cytoplasmic protein TERM 2537 1898284 - 1898273 - G 77 -4.4 -4.84359 | opp_overlap 1898273 GTATGGTTATAAAAA GGAT GCTG ATCC TTTAGCGGCGTCTCA TERM 2538 1900451 - 1900437 - g 74 -7 -4.35017 | opp_overlap 1900442, overlap 1900439 GAAAAACTGAAGAAA GCCGCC GCG GGCGCC AGCGCTATTATCGCC mbhS 1900029 - 1901117 + | hydrogenase-1 small subunit TERM 2539 1902184 - 1902207 + F 73 -7.4 -4.09739 | gap 1 CTGGTATCGCTATCC GGACGATCGGC TGG GCCG-TCATCC TTTTGACGGCATTAC TERM 2540 1902567 - 1902551 - f 82 -7.9 -4.67904 | GACCAACCTGAAAAA CGGCGAC CTG GCCACCG CCAATACCGAGAAAT cybH 1902927 - 1903658 + | hydrogenase 1 b-type cytochrome subunit hyaD 1903655 - 1904251 + | hydrogenase 1 maturation protease hyaE 1904241 - 1904645 + | hydrogenase-1 operon protein HyaE TERM 2541 1905220 - 1905242 + G 74 -3.2 -4.84017 | overlap 1905222 CAATTTGACCCAACT GCCGCTCAGC GAG GCCGATCGTC TTTTTCTGGCACGTT hyaF 1904642 - 1905490 + | putative hydrogenase-1 protein TERM 2542 1906197 - 1906221 + F 100 -14.3 -3.83998 | TCTGCTACGTGGCCG CGAGCGTGAGG TGG CCTTGCGCTCG TTTGCTATCGGCTCA SC1787 1908270 - 1908359 + | hypothetical protein TERM 2543 1908366 - 1908397 + F 100 -10.9 -5.36364 | opp_overlap 1908369, overlap 1908369 CAACAATAAAGAGGT AAACCGGGGTCAG CGCCGT CTGACTCCGGTTA TTTTTATCTTTTTAC TERM 2544 1908394 - 1908369 - f 84 -10.4 -3.84931 | opp_overlap 1908366 1908369 CAATAAAGAGGTAAA CCGGGGTCAG CGCCGT CTGACTCCGG TTATTTTTATCTTTT TERM 2545 1908369 - 1908394 + F 100 -12.6 -4.69512 | opp_overlap 1908369, overlap 1908366 CAATAAAGAGGTAAA CCGGGGTCAG CGCCGT CTGACTCCGG TTATTTTTATCTTTT gdh 1908703 - 1910028 + | glutamic dehyrogenase TERM 2546 1910052 - 1910069 + F 95 -7.7 -5.4492 | opp_overlap 1910052 GTTATTGCGCTAAAA TCCACGT CCCG GCGTGGA TTTTTTGTCTGTATA TERM 2547 1910069 - 1910052 - f 71 -7 -4.08767 | opp_overlap 1910052 GTTATTGCGCTAAAA TCCACG TCCCGG CGTGGA TTTTTTGTCTGTATA treA 1910242 - 1911954 + | trehalase TERM 2548 1911945 - 1911932 - T 78 -5.9 -4.8543 | CAACGCCGACAAAAA CGCCG TCTG CAGCG ACGCAGTAACGCGTG TERM 2549 1911997 - 1911970 - T 76 -12 -2.62184 | opp_overlap 1911965 CGCGTGTTTATAGTA GGTTGACCCGGC GCTG ACCGGGTCAACG CTTACACGTTCTGCA ymgE 1912271 - 1912017 - | putative transglycosylase-associated protein ycgR 1912440 - 1913174 + | hypothetical protein emtA 1913799 - 1913188 - | membrane-bound lytic murein transglycosylase E TERM 2550 1914036 - 1914022 - g 75 -12.8 -2.55896 | overlap 1914021 1914019 TGTATTAACCAACAG GCCGCG TTA CGCGGC GTTCAGCGCCTGACT TERM 2551 1914094 - 1914104 + G 70 -6.8 -4.11216 | GAGGTGATTCGTCGC CGCT ATC AGCG TTTTGCCGGTACGGA ldcA 1913971 - 1914879 + | L,D-carboxypeptidase A TERM 2552 1915464 - 1915477 + G 75 -3.7 -4.8543 | opp_overlap 1915453 1915464 CGAATCGGGAAGTAA CGACC CGAT GGCCG TTTTTCTGACCATTA ycgO 1914982 - 1916715 + | potassium/proton antiporter TERM 2553 1916736 - 1916716 - T 74 -8.2 -3.90241 | overlap 1916729 GATGAAGCAGAATAA GGTCGCCG GACAA CGTCGACC CGCCCCCAGGTGGAC TERM 2554 1916760 - 1916729 - T 86 -13.7 -3.29043 | overlap 1916716 AAGGTCGCCGGACAA CGTCGACCCGCCC CCAGGT GGACCGGTCGACG CCTTAGCCTGAGTCA dadX 1917848 - 1916778 - | alanine racemase dadA 1919160 - 1917862 - | D-amino acid dehydrogenase small subunit TERM 2555 1918952 - 1918962 + g 70 -5.4 -4.42788 | AGCGGCGCATGGCGC TGGA ACA TCCA TTTTATCGCCTTCAG TERM 2556 1919397 - 1919407 + H 72 -3.2 -5.06451 | AAAGAAAAGTTTTCA CGAT CAA GTCG TTTTTTAACATGGTG TERM 2557 1920250 - 1920232 - g 75 -3.7 -4.87665 | TTTTATGGAGAAAAA CGCCCCG TTGCT CGAGCCG TGGCAGCGCGAAATT ycgB 1919483 - 1921015 + | hypothetical protein fadR 1921805 - 1921062 - | fatty acid metabolism regulator TERM 2558 1922017 - 1922036 + G 89 -9.2 -4.57569 | TGGAGATCTCATGGG GTCGCGCC ATGT GGCGCAAC TTTTTAGGCCAGTCG TERM 2559 1922331 - 1922342 + G 72 -2.2 -4.86385 | overlap 1922330 ATCTACTTTATGAAG CAGT TATT GCTG TTTATTTTTACCCGT nhaB 1922001 - 1923545 + | sodium/proton antiporter dsbB 1923687 - 1924217 + | disulfide bond formation protein B TERM 2560 1924224 - 1924239 + F 100 -10.4 -5.75342 | opp_overlap 1924224 GGTCGTTGATACACA CGCTCC TTCG GGAGCG TTTTTTTTGCCCGAA TERM 2561 1924239 - 1924224 - f 73 -10.4 -2.98823 | opp_overlap 1924224 GGTCGTTGATACACA CGCTCC TTCG GGAGCG TTTTTTTTGCCCGAA yeaR 1924326 - 1924667 + | putative cytoplasmic protein TERM 2562 1924713 - 1924681 - T 72 -10.5 -2.92171 | opp_overlap 1924678, overlap 1924678 GACATCGGTAAACCA GTCACCACTGGGCGG GTC CCGCCCAGTAGCCAG GTGATTAATGGCGCT rpmF 1924911 - 1924738 - | hypothetical protein TERM 2563 1925083 - 1925055 - R 100 -12.4 -5.17054 | opp_overlap 1925055 AGAAGATGTAAAAAA CCGCCTGGCGCA GACGG TGCATCAGGCGG TTGGTTAATAGCACA TERM 2564 1925055 - 1925083 + r 85 -12.4 -3.39895 | opp_overlap 1925055 AGAAGATGTAAAAAA CCGCCTGGCGCA GACGG TGCATCAGGCGG TTGGTTAATAGCACA SC1803 1925241 - 1925104 - | hypothetical protein ycgN 1926039 - 1925593 - | hypothetical protein ycgM 1926791 - 1926132 - | hypothetical protein TERM 2565 1926442 - 1926453 + g 77 -3.6 -5.10154 | TTGGCTTTTTCCCAG GGCT GTCC GGCC TTTTTCATTTTCCCT ycgL 1927173 - 1926841 - | putative cytoplasmic protein TERM 2566 1927369 - 1927382 + G 87 -8.1 -4.56597 | opp_overlap 1927368 1927366 1927369 TAGAAGACAAAATAG CGCAG GCTC CTGCG TTTTTAAAACACGCC minC 1927260 - 1927967 + | septum formation inhibitor TERM 2567 1928288 - 1928275 - g 71 -9.5 -3.5241 | overlap 1928273 GACCCGGGATAAAGA CGCGC TAAC GCGCG AAGGCGTCGCTAAGG TERM 2568 1928322 - 1928342 + G 74 -10.5 -3.57144 | opp_overlap 1928321 1928322 TGGACTCACTGAAAG CGATGGACT TTG AGTTCATCG TTTGCGACTCGCCGG minD 1927991 - 1928803 + | cell division inhibitor MinD TERM 2569 1929028 - 1929011 - g 76 -5.5 -4.72986 | opp_overlap 1929013 CAGCTTGAGCAAAAA GATGGTG ATAT CTCCATC CTTGAACTTAACGTA minE 1928807 - 1929073 + | cell division topological specificity factor MinE TERM 2570 1929100 - 1929129 + T 100 -15.3 -5.57054 | opp_overlap 1929107, overlap 1929107 GGAAAATTCCTGGAT TAAAAAAGGCAGA AGAA TCTGCCTTTTTTA TTTTTTTACATTATT TERM 2571 1929107 - 1929122 + T 100 -9 -6.12458 | opp_overlap 1929107, overlap 1929100 TCCTGGATTAAAAAA GGCAGA AGAA TCTGCC TTTTTTATTTTTTTA TERM 2572 1929122 - 1929107 - T 100 -9 -5.14563 | opp_overlap 1929107 1929100 TCCTGGATTAAAAAA GGCAGA AGAA TCTGCC TTTTTTATTTTTTTA rnd 1930322 - 1929195 - | ribonuclease D TERM 2573 1930254 - 1930300 + g 83 -12.4 -3.74626 | gap 2, opp_overlap 1930253 1930252 1930250 ATCTAAAGCAATAGC CGGAC-ATGCGC-GGACAGCCT CACAC AGGCTCGCCAGCGCATCGTCCG TTTCAATCATTTGGT TERM 2574 1930354 - 1930370 + r 73 -10.8 -3.0127 | opp_overlap 1930354 TTCGCGCCAAAAAAA CGCCGG CTTAA CCGGCG TCTCTCGTTAGCTGA TERM 2575 1930370 - 1930354 - R 100 -11.5 -5.40072 | opp_overlap 1930354 TTCGCGCCAAAAAAA CGCCGGC TTA ACCGGCG TCTCTCGTTAGCTGA fadD 1931935 - 1930394 - | long-chain-fatty-acid--CoA ligase TERM 2576 1932262 - 1932238 - g 81 -14.4 -2.56596 | opp_overlap 1932238 1932242, overlap 1932242 GTCTCTATGAATGCA GAAACAGCGG ACCAG CCGCTGTTTC TTTTATTGATAAAAC TERM 2577 1932238 - 1932262 + G 100 -14.4 -4.71426 | opp_overlap 1932238 1932242, overlap 1932242 GTCTCTATGAATGCA GAAACAGCGG ACCAG CCGCTGTTTC TTTTATTGATAAAAC TERM 2578 1932242 - 1932258 + G 100 -9.4 -4.90302 | opp_overlap 1932238 1932242, overlap 1932238 CTATGAATGCAGAAA CAGCGG ACCAG CCGCTG TTTCTTTTATTGATA TERM 2579 1932258 - 1932242 - g 76 -9.4 -3.98826 | opp_overlap 1932242 1932238, overlap 1932238 CTATGAATGCAGAAA CAGCGG ACCAG CCGCTG TTTCTTTTATTGATA SC1812 1932099 - 1932305 + | hypothetical protein slp 1932865 - 1932284 - | putative outer membrane protein yeaZ 1933632 - 1932937 - | putative molecular chaperone yoaA 1935600 - 1933690 - | putative DNA helicase yoaB 1935732 - 1936076 + | hypothetical protein TERM 2580 1936138 - 1936104 - T 71 -7.2 -4.11216 | gap 2 TCTTCATCCTCAAAA CGCGCC-ACTAT-CCG TTCGC CGGTATGGTTGGCGCG AAGTTCGCCCGCCAC yoaH 1936261 - 1936082 - | hypothetical protein pabB 1936342 - 1937706 + | para-aminobenzoate synthase component I TERM 2581 1937908 - 1937883 - g 70 -9.7 -3.35046 | gap 1, overlap 1937881 TCATTTGCGCAAACA CGCCGG-ACAGG TCG CCTTTCCCGGCG GGGCCGTGGACAGTA yeaB 1937710 - 1938288 + | hypothetical protein TERM 2582 1938781 - 1938805 + G 89 -9.3 -4.63486 | overlap 1938775 GTAATGAACCCGCTA CCGTGGATATT GAT AGTATCCCCGG TTTTATTCGCGACGT TERM 2583 1939416 - 1939376 - g 74 -9.6 -3.76048 | gap 1, overlap 1939413 GGTGAACGAAGAGAA CGCCGCAGGTGGTCG-CGT CGTG ACGGCGCCAACCAACGGCG CGTGCGGCATCGTGC sdaA 1938570 - 1939916 + | L-serine deaminase I/L-threonine deaminase I TERM 2584 1939933 - 1939961 + F 100 -13.9 -5.10968 | overlap 1939934 CGCCGTTTCCCCTCC CTTCGCCCATCTG CTA CGGATGGGCGAAA TTTTTATCTCTTCCT TERM 2585 1939934 - 1939960 + F 100 -17.4 -3.64954 | overlap 1939933 GCCGTTTCCCCTCCC TTCGCCCATCTG CTA CGGATGGGCGAA ATTTTTATCTCTTCC TERM 2586 1940712 - 1940687 - g 89 -2.7 -5.63103 | gap 1 CCGGAATTAAAAAAA GATGAAGAGC GTTACCA GCT-TTCATC GCGGCATTTCCCTTT yoaD 1939952 - 1941655 + | hypothetical protein yoaE 1943236 - 1941677 - | putative inner membrane protein SC1823 1943559 - 1943224 - | putative cytoplasmic protein TERM 2587 1944145 - 1944117 - g 100 -9.4 -4.86033 | overlap 1944119 AAACCGGTAGAAAAA GCCGCGCCAGCG CCAGT CGCCGCCGCGCC AAAAGCGGCCGCACC TERM 2588 1944594 - 1944584 - g 78 -6.8 -4.59853 | overlap 1944573 1944593 CGAAGCCTTTAAAAA GCTC AAC GAGC GCGGCATCGAGCTTG manX 1943709 - 1944677 + | sugar specific PTS family mannose-specific enzyme IIAB manY 1944730 - 1945530 + | sugar specific PTS family mannose-specific enzyme IIC TERM 2589 1945589 - 1945579 - g 79 -3.2 -5.28778 | overlap 1945580 ACCACCGAGAAAAAA CTCA CTC CGAG CGATATTCGCGGCGT TERM 2590 1945965 - 1945989 + G 72 -4.1 -4.81734 | opp_overlap 1945964, overlap 1945964 AGGTATTGCAATGAG CGGCAGCCTGC TTG GTCCGCTGCTG TTTTTCATCCTGTTT manZ 1945534 - 1946394 + | mannose-specific PTS system protein IID TERM 2591 1946429 - 1946410 - f 71 -10.6 -2.62184 | opp_overlap 1946411 GGCTGTTGTACACTA CCGGGGCC AAAC GGCCCCGT TTTTTTATTTCTCTG TERM 2592 1946411 - 1946428 + F 100 -14.1 -6.04953 | opp_overlap 1946410 GCTGTTGTACACTAC CGGGGCC AAAC GGCCCCG TTTTTTTATTTCTCT yobD 1946453 - 1946911 + | hypothetical protein TERM 2593 1946962 - 1946977 + F 78 -6.2 -4.66537 | opp_overlap 1946962 TATTTCGAATCATAA TATAGC TAAG GCTATA TTTTCTATTGACCAA TERM 2594 1947852 - 1947874 + G 91 -12 -4.14392 | opp_overlap 1947851 1947850, overlap 1947853 GTACTGATAGGAATT GGCGTCCAGA TCC TCTGGACGCA TTTTCACGGTTAACG TERM 2595 1947853 - 1947873 + G 93 -15.5 -3.08314 | opp_overlap 1947851 1947850, overlap 1947852 TACTGATAGGAATTG GCGTCCAGA TCC TCTGGACGC ATTTTCACGGTTAAC yebN 1947267 - 1947887 + | hypothetical protein rrmA 1948693 - 1947884 - | 23S rRNA methyltransferase A ftsI 1950503 - 1948758 - | putative penicillin-binding protein-3 TERM 2596 1950192 - 1950177 - G 71 -10.4 -3.16475 | opp_overlap 1950176 1950178 GAGCGACAGATGTAA GGCGCT GGCC AGCGCC TGCCAGCGCTCATTG TERM 2597 1950178 - 1950201 + g 79 -13.2 -2.82623 | gap 1, opp_overlap 1950177, overlap 1950176 AGCGACAGATGTAAG GCGCTGGCCAG CGC CTG-CCAGCGC TCATTGTAGCCAACG TERM 2598 1950438 - 1950417 - G 71 -7.3 -3.9461 | CCGCCCTAACAACAA TGCCATACT GAGC AGAATGGCA GTGCAAAGTAGTGCA TERM 2599 1950589 - 1950573 - R 85 -3.7 -5.47914 | AAAAACCAGAAAAAA CAATGCT AAT AACATCG CGCCTTTGCAACAAA TERM 2600 1950656 - 1950674 + r 87 -10.2 -4.128 | opp_overlap 1950656 ATATTGAATTAAAAA GCCCCGCT TTT AGCGAGGC TTTATATCTGAGGCT TERM 2601 1950674 - 1950656 - R 100 -12.4 -4.89009 | opp_overlap 1950656 ATATTGAATTAAAAA GCCCCGCT TTT AGCGAGGC TTTATATCTGAGGCT TERM 2602 1950746 - 1950730 - R 70 -9.5 -2.94099 | overlap 1950745 GGTGTCGATCAGATA GCTGTTA CGT TAACAGC AGCCGGACCTTTCTG cspC 1950932 - 1950723 - | cold shock-like protein CspC TERM 2603 1950787 - 1950805 + g 70 -6.7 -4.09739 | overlap 1950788 ATTTCGAACTCAACG TTCTGGC CTTCA GCCAGAG TTTTGAAACCATTGC yobF 1951088 - 1950945 - | putative cytoplasmic protein TERM 2604 1951450 - 1951437 - H 71 -3.9 -4.88288 | overlap 1951442 CAAAATAATAGAAAA GAAAA GCGA TTTTC GACACCGCTTTTTGT TERM 2605 1951458 - 1951442 - H 75 -2.9 -5.26907 | overlap 1951437 TAATAGAAAAGAAAA GCGATTT TCG ACACCGC TTTTTGTGATGTTCT insA 1951664 - 1951939 + | insertion element IS1 1/2/3/5/6 protein insA insB 1951858 - 1952361 + | IS1 transposase yebO 1952800 - 1952513 - | hypothetical protein TERM 2606 1952571 - 1952587 + g 77 -3.5 -5.00765 | overlap 1952574 GGTTCGCTTGCCGCT GTTGCGG GTT CCGCTTC TTTTTCTGGTTCGTT TERM 2607 1952574 - 1952584 + g 87 -8.2 -4.58563 | overlap 1952571 TCGCTTGCCGCTGTT GCGG GTT CCGC TTCTTTTTCTGGTTC TERM 2608 1952610 - 1952644 + g 72 -11.5 -3.14132 | opp_overlap 1952614 1952615, overlap 1952615 GGTTCGTTTGCTTCG CAAAGGCGGCGTAAC AACGC GTTTTGCCGCTTTTG TTGATCCAACAACGC TERM 2609 1952615 - 1952639 + g 86 -7.8 -4.71426 | opp_overlap 1952615 1952614, overlap 1952610 GTTTGCTTCGCAAAG GCGGCGTAAC AACGC GTTTTGCCGC TTTTGTTGATCCAAC yobG 1953014 - 1952871 - | hypothetical protein SC1837 1953172 - 1953411 + | hypothetical protein TERM 2610 1953570 - 1953592 + T 89 -4.8 -5.78622 | opp_overlap 1953570 TATGTTATAAAAAAA GCAGCTAC ATTTTTC GCAGCTGC TTTTTTTTAACGTCA TERM 2611 1953592 - 1953570 - T 100 -7.7 -5.626 | opp_overlap 1953570 TATGTTATAAAAAAA GCAGCTACA TTTTT CGCAGCTGC TTTTTTTTAACGTCA kdgR 1954414 - 1953623 - | IclR family transcriptional regulator TERM 2612 1954618 - 1954600 - g 74 -2.2 -5.09895 | overlap 1954602 1954603 TACTTATGGAAAAAA CACGGGCC GAT GGCCTGCC CCTCCCGCAGAGATA TERM 2613 1954616 - 1954602 - g 70 -7 -4.17608 | overlap 1954600 1954603 CTTATGGAAAAAACA CGGGCC GAT GGCCTG CCCCTCCCGCAGAGA TERM 2614 1955047 - 1955076 + G 73 -6.4 -4.45485 | gap 2, overlap 1955048 TCGTCGCAGTCTCTT CCGCCGCGG-G-TC CGAC GATCGCCGCGGCGA TTTTGTCCATCTCAT yebQ 1954590 - 1955963 + | putative transport protein TERM 2615 1955986 - 1955969 - T 100 -12.7 -5.42259 | opp_overlap 1955969 TCAGGCGTAAAAAAA GCGCGTC ATTC GACGCGC TTTTCATACTTGCCA TERM 2616 1955969 - 1955986 + T 95 -12.7 -4.3534 | opp_overlap 1955969 TCAGGCGTAAAAAAA GCGCGTC ATTC GACGCGC TTTTCATACTTGCCA htpX 1956892 - 1956011 - | heat shock protein HtpX TERM 2617 1956442 - 1956471 + g 70 -8.7 -3.73224 | gap 1, opp_overlap 1956450 GAATCAACGTCATCG TCA-CCATATCGCC ATT GGCAATATGGCTGA TTTCATGCGCAATGA TERM 2618 1957057 - 1957078 + r 95 -13.1 -3.69836 | opp_overlap 1957057, overlap 1957038 CTTGTTAAAAAAAAA CAGGCACAA TTTT TTGTGCCTG TTTAGCGTTACTTAT TERM 2619 1957078 - 1957057 - R 100 -13.1 -6.06723 | opp_overlap 1957038 1957057 CTTGTTAAAAAAAAA CAGGCACAA TTTT TTGTGCCTG TTTAGCGTTACTTAT TERM 2620 1957103 - 1957115 + r 86 -4.7 -5.61881 | ACTTATTGGCTGCCG CCTGC TCC GCTGG TTTTTCTTTTTCAAG prc 1959134 - 1957086 - | carboxy-terminal protease TERM 2621 1957959 - 1957988 + g 75 -5.7 -4.63542 | ACCGCCGTTTGAACG CAGATCGATAACG ATGC TGTTAACGTTCTG TTTTTCCAGCTTCTG TERM 2622 1958783 - 1958766 - G 74 -10.5 -3.60792 | opp_overlap 1958766 1958766 CTGGTAACGTTCAAA CCGGCGC TTTT GCGCCAG GTTATAAAGATCGTA TERM 2623 1959103 - 1959078 - G 83 -14.8 -2.72344 | TTCCACGGCGAAGGA CTGGCCTGCT AATGCA AGCAGGCCAG CTAACGCGGTAAGCC proQ 1959840 - 1959154 - | putative solute/DNA competence effector TERM 2624 1959348 - 1959315 - G 74 -7.3 -4.1043 | gap 1, opp_overlap 1959315 1959316 1959344 1959346, overlap 1959316 CTGAAATATCAGAAA CCGGCGTGTGCTTCTC TTC GCGAGGCGCACG-CGG CGCTTTCGTCGTCGG TERM 2625 1959402 - 1959444 + g 85 -9 -4.40561 | overlap 1959399 CAGCGCCTTCTTTAC GACGCGCTACCGGGCGAG GTTTACG CTCGCGTCGCGGCGCGTC TTCTTTTTCGCCAGC TERM 2626 1959463 - 1959477 + g 85 -4.9 -5.17576 | TTTTTCGCCAGCCGC CGCGG CAGCT TCGCG TTTTTTCGCTTGCTG TERM 2627 1959910 - 1959891 - R 81 -12.2 -3.15996 | overlap 1959889 CAGCAGGCATGAACA GGCGTCAT TATA ATGACGCC ATCAGTAATTGCTAC yebR 1960522 - 1959938 - | GAF domain-containing protein TERM 2628 1961499 - 1961512 + GH 75 -3.7 -4.83615 | opp_overlap 1961496, overlap 1961496 CAGCAGCAATATCGC CGTCG CCGC CGTCG TTTTTATCGCCAGTA yebS 1960564 - 1961847 + | hypothetical protein TERM 2629 1962132 - 1962190 + GF 71 -9.5 -3.14211 | opp_overlap 1962132 1962137, overlap 1962115 1962119 1962162 CGTTGCGCGAAGAGA CGCAATTCTGGCTGGTGACGCCC-AAAGC CTC GCTGGCGGGCGTTTCCGGCCTGGAT-GCG TTGGTCGGCGGGAAT TERM 2630 1963276 - 1963306 + GF 74 -11.1 -2.79796 | overlap 1963278 TATTTTACCCGGTAC GAGCGGGAAGATG AAATC CACCTACCCGCTC TATGCTAACCTAGAA yebT 1961774 - 1964449 + | hypothetical protein TERM 2631 1964456 - 1964481 + F 100 -12.5 -4.46926 | opp_overlap 1964451 1964454 1964453, overlap 1964457 1964470 CCACGTTAAACACCC GGCTCCGGCGT ACTC GCGCCGGAGCG TTTTATGCTACACTG TERM 2632 1964457 - 1964480 + F 100 -16 -3.27674 | opp_overlap 1964451 1964454 1964453, overlap 1964456 1964470 CACGTTAAACACCCG GCTCCGGCGT ACTC GCGCCGGAGC GTTTTATGCTACACT TERM 2633 1965172 - 1965162 - g 86 -6.8 -5.02074 | TGATGCGCTAAAAAA CTGG TCG CCAG AAAGCAATCTGGATA TERM 2634 1965651 - 1965662 + G 75 -5.8 -4.58395 | AATTGAATCACTGAT CGGA AAAG TCCG TTTTTCCCGGCTCGG yebU 1964527 - 1965966 + | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 2635 1966098 - 1966109 + G 74 -7.2 -4.13767 | opp_overlap 1966091 GATGAAAACCAGTGT GCGC ATTG GCGC TTTTGAAATCGACGA TERM 2636 1966180 - 1966190 + G 70 -6.8 -4.128 | opp_overlap 1966180, overlap 1966176 ACAATCCCCTGTAAA TCCG ATC CGGA TTTATGTATGCAACT yebV 1966081 - 1966320 + | hypothetical protein TERM 2637 1966329 - 1966350 + F 78 -6.5 -4.55759 | opp_overlap 1966329 1966332, overlap 1966332 TGCCTGACTCAAAAA GAACCCGTC GCCA GGCGGGTTA TTTATTCTTCCTTTT TERM 2638 1966332 - 1966347 + F 79 -8.2 -4.34486 | opp_overlap 1966332 1966329, overlap 1966329 CTGACTCAAAAAGAA CCCGTC GCCA GGCGGG TTATTTATTCTTCCT TERM 2639 1966347 - 1966332 - f 72 -6 -4.44608 | opp_overlap 1966329 1966332, overlap 1966329 CTGACTCAAAAAGAA CCCGTC GCCA GGCGGG TTATTTATTCTTCCT SC1848 1966430 - 1966621 + | hypothetical protein pphA 1967290 - 1966640 - | serine/threonine protein phosphatase 1 TERM 2640 1966954 - 1966939 - G 84 -3.2 -5.42164 | overlap 1966940 GACAAAGAATAAAAA GCGC TTCAGCTT GCGC AGCGTGTTCAGCCGT TERM 2641 1967109 - 1967094 - G 76 -10.4 -3.767 | opp_overlap 1967107 GACTCACGCAGTAAA GCCTGG CAAC CCAGGC TGTCCGGGCCTCTAT TERM 2642 1967477 - 1967429 - R 84 -8.1 -4.66318 | overlap 1967434 1967435 1967438 ATCATCGCAATAAAA TATAATTGACTGCGCCAGGGAAC GTT ATCCCCTGGCGCAGCGAGCTACT CACTATCACCTGTTC TERM 2643 1967471 - 1967434 - R 95 -13.5 -4.0865 | gap 1, overlap 1967429 1967435 1967438 CGCAATAAAATATAA TTGACTGCGCCAGGGAAC GTT ATCCCCTGGCGCAG-CGA GCTACTCACTATCAC TERM 2644 1967471 - 1967435 - R 93 -15.9 -3.04106 | overlap 1967434 1967429 1967438 GCAATAAAATATAAT TGACTGCGCCAGGGAAC GTT ATCCCCTGGCGCAGCGA GCTACTCACTATCAC TERM 2645 1967468 - 1967438 - R 100 -19.8 -2.71742 | overlap 1967434 1967435 1967429 ATAAAATATAATTGA CTGCGCCAGGGAAC GTT ATCCCCTGGCGCAG CGAGCTACTCACTAT SC1850 1967677 - 1967513 - | putative inner membrane protein SC1851 1967888 - 1967739 - | hypothetical protein TERM 2646 1967889 - 1967858 - G 100 -11 -4.75288 | TTATATTAAAATAAA TATGACGACGTTTT GTTA AAAGCGTCGCCATA AAAATGAATATATAG sopE2 1968684 - 1967962 - | TypeIII-secreted protein effector: invasion-associated protein TERM 2647 1968193 - 1968208 + g 84 -3.2 -5.36441 | CGCCCCTGCCCCACC TGGAGT AAAT ACACCA TTTTTTATCTCCCCA TERM 2648 1969208 - 1969198 - H 76 -2.4 -5.41143 | TAGTGGTCAAAAAAA CGCG CTA CGAG AAATAATCAGTAACA TERM 2649 1969717 - 1969699 - g 86 -3.8 -5.41359 | opp_overlap 1969710, overlap 1969700 1969709 1969710 AATTAAACCAAAAAA CTCGACAA TAC TGGTCGAA AGACAACCAATTATT ycgX 1969368 - 1969763 + | putative cytoplasmic protein TERM 2650 1969932 - 1969916 - f 74 -10.9 -2.80074 | opp_overlap 1969914, overlap 1969911 TGCTCGACAACAGCA TCTCCTG GTG CAGGAGA AATGATATTCAAAGC SC1854 1970091 - 1970567 + | hypothetical protein bls 1971359 - 1970940 - | putative acetyltransferase SC1856 1971682 - 1971488 - | hypothetical protein SC1857 1971905 - 1972051 + | hypothetical protein SC1858 1972164 - 1972304 + | putative cytoplasmic protein TERM 2651 1972476 - 1972455 - T 79 -10.1 -3.76224 | TGCCCAGTTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA TERM 2652 1972509 - 1972493 - T 76 -5.1 -4.78839 | AACTCGATAATAAAA CGGCT CATCGCC AGCCG CCAGTTCTGGATCGG tnp 1972781 - 1972641 - | putative transposase TERM 2653 1973160 - 1973170 + H 79 -8.2 -4.24204 | TGGGGTACAGCGCAT CCGG TTG CCGG TTTTGCCTCTCAGTG int 1973747 - 1974115 + | putative cytoplasmic protein TERM 2654 1974189 - 1974168 - T 89 -4.4 -5.72622 | opp_overlap 1974168, overlap 1974170 GGTATAAAGAAAAAA GACCGAAT ACAGAA ATTCGGAC GTATTTCGGGCCATT TERM 2655 1974187 - 1974170 - T 72 -5.6 -4.49311 | opp_overlap 1974168, overlap 1974168 TATAAAGAAAAAAGA CCGAAT ACAGAA ATTCGG ACGTATTTCGGGCCA TERM 2656 1974459 - 1974402 - T 73 -11.5 -2.59051 | gap 1, opp_overlap 1974454, overlap 1974401 TGAACAAGTAAAATC CGCCGCAA-CTGGCAACCATTCAATACT CGC ACTATCGAACGATCGCCAGCTTGCCGCA GCCCGTTCTTGCATA umuC 1974717 - 1974550 - | error-prone repair: component of DNA polymerase V with UmuD' stbD 1974734 - 1975258 + | putative fimbriae; usher pagO 1976049 - 1976963 + | PhoPQ-activated gene; integral membrane protein SC1864 1977096 - 1977254 + | putative inner membrane protein TERM 2657 1977423 - 1977434 + G 86 -3.6 -5.28942 | GCTGGCCTCATCATC GCCG GTTT TGGC TTTTTATTTAACCTC TERM 2658 1977854 - 1977844 - g 70 -6.8 -4.07568 | opp_overlap 1977852, overlap 1977846 TTGCCTTTCTGAAAA CAGG CCT CCTG ACGAGGACAGTTCTC SC1865 1977264 - 1977878 + | putative inner membrane protein yebW 1978078 - 1978269 + | putative inner membrane lipoprotein TERM 2659 1978282 - 1978253 - T 77 -10.7 -3.34192 | opp_overlap 1978250 1978254, overlap 1978254 AATTGTCTGAAGTAA CTTCCCTGCAGCA TTGA CGCCGCAGGGAAT CTATTTATAGTGTAA TERM 2660 1978254 - 1978281 + T 79 -11.3 -3.37299 | opp_overlap 1978253 1978254, overlap 1978250 ATTGTCTGAAGTAAC TTCCCTGCAGC ATTGAC GCCGCAGGGAA TCTATTTATAGTGTA TERM 2661 1978281 - 1978254 - T 83 -14.2 -2.60194 | opp_overlap 1978254 1978250, overlap 1978253 ATTGTCTGAAGTAAC TTCCCTGCAGCA TTGA CGCCGCAGGGAA TCTATTTATAGTGTA yjcS 1980266 - 1978287 - | putative hydrolase TERM 2662 1978711 - 1978687 - G 75 -12.1 -2.90723 | GGACCTTTAACCACA CCGTTACGCAG CTC CTGCGCACCGG TCAGGTAGAAGTTAC TERM 2663 1980855 - 1980899 + G 90 -4.4 -5.30155 | opp_overlap 1980863, overlap 1980858 1980861 CGATCAGTGCACAGA CTGGAATACTGCCTTTAATA GACGA TATTATGGGCAGTATTATTG TTTTTTCGTTCCTGA TERM 2664 1980858 - 1980896 + G 81 -6.9 -4.72473 | opp_overlap 1980863, overlap 1980855 1980861 TCAGTGCACAGACTG GAATACTGCCTTTAATA GACGA TATTATGGGCAGTATTA TTGTTTTTTCGTTCC TERM 2665 1980861 - 1980893 + G 83 -8.6 -4.42047 | opp_overlap 1980863, overlap 1980858 1980855 GTGCACAGACTGGAA TACTGCCTTTAATA GACGA TATTATGGGCAGTA TTATTGTTTTTTCGT TERM 2666 1981073 - 1981085 + G 73 -6.2 -4.3767 | ATCCTTATGCTTACC GCGC TGGCT GCGC TTTATTATCATCTGC TERM 2667 1981702 - 1981724 + G 71 -9.8 -3.61398 | overlap 1981703 CATCACCCTTTCCAC AGCCGGTGAC ACT GTTACCGGCA TTATTGCCAGAGCGG TERM 2668 1981703 - 1981723 + G 79 -13.3 -2.76696 | overlap 1981702 ATCACCCTTTCCACA GCCGGTGAC ACT GTTACCGGC ATTATTGCCAGAGCG yreP 1980662 - 1981792 + | hypothetical protein SC1869 1982474 - 1982079 - | putative DNA-binding protein recT 1982538 - 1982861 + | RecT protein recT 1982653 - 1982994 + | RecT protein TERM 2669 1983182 - 1983163 - f 71 -3.5 -4.82901 | GCGGTTGTACAAAAA CGAGCAC GGCGAG GTGTTCG CCCAAAAACTCCTGG TERM 2670 1983970 - 1983994 + F 87 -10.7 -4.15565 | CCTTATTGCTGCCTT CGCAGTGACAG TAA CTGTCCCTGTG TTTTCACATCCTAAC TERM 2671 1984583 - 1984559 - g 70 -3 -4.68384 | gap 1, opp_overlap 1984563, overlap 1984564 ATTGATTCAATAAAA TAT-AACACAG GGAA CTGTGCTGATA TGTCGCTAATTTTAG TERM 2672 1984577 - 1984564 - g 70 -6.7 -4.0865 | opp_overlap 1984563, overlap 1984559 TTCAATAAAATATAA CACAG GGAA CTGTG CTGATATGTCGCTAA SC1872 1984202 - 1985002 + | hypothetical protein int 1987865 - 1987290 - | hypothetical protein vtaP 1988135 - 1987953 - | Gifsy-1 prophage VtaP SC1875 1988508 - 1988215 - | hypothetical protein TERM 2673 1988608 - 1988590 - gR 83 -7.4 -4.61648 | overlap 1988604 AAGAATAACAACAAA TCCGGTTG AGT CAACCCGA GCACCTGAAATTAAG TERM 2674 1988674 - 1988688 + Gr 70 -10 -3.07629 | opp_overlap 1988660 CGCCACGCGGACGGC GGCAGA ACA TCTGCC TGTGTGGTTTCCTCT TERM 2675 1988971 - 1988938 - gR 76 -5.1 -4.81685 | overlap 1988940 AGGAATCAGGAAAAA TAGCCCGACCGGG AATATTCA CCCGGATGGGCTG ACAAAGAAATTTGTA TERM 2676 1988969 - 1988940 - gR 73 -7.7 -4.02049 | overlap 1988938 GAATCAGGAAAAATA GCCCGACCGGG AATATTCA CCCGGATGGGC TGACAAAGAAATTTG int 1988441 - 1989181 + | putative phage integrase protein TERM 2677 1989346 - 1989317 - TR 90 -7.3 -5.33026 | gap 1, overlap 1989319 TAATCTAAATAAAAA GAGACCGAATAC GATTCCT GTATTCGGTC-C AGGGAAATGGCTCTT TERM 2678 1989345 - 1989319 - TR 91 -11 -4.2793 | overlap 1989317 ATCTAAATAAAAAGA GACCGAATAC GATTCCT GTATTCGGTC CAGGGAAATGGCTCT prpA 1989494 - 1989378 - | hypothetical protein TERM 2679 1989509 - 1989536 + r 100 -11.4 -5.45652 | opp_overlap 1989509 TCAGAGATAAAAAAA CCGTAAGCCTTT TCGT GAAGGTTTACGG TTTTTTATTAAAAAT TERM 2680 1989536 - 1989509 - R 100 -8.5 -5.76633 | opp_overlap 1989509 TCAGAGATAAAAAAA CCGTAAGCCTT TTCGTG AAGGTTTACGG TTTTTTATTAAAAAT yebY 1989908 - 1989555 - | hypothetical protein yebZ 1990800 - 1989925 - | putative inner membrane protein yobA 1991175 - 1990801 - | hypothetical protein holE 1991313 - 1991543 + | DNA polymerase III subunit theta yobB 1991651 - 1992307 + | hypothetical protein exoX 1992331 - 1993029 + | exodeoxyribonuclease X TERM 2681 1993056 - 1993030 - T 74 -8.7 -3.89291 | gap 1, opp_overlap 1993032, overlap 1993021 GGAACACCACAATAA CCCGCGAC-GCT CACA AGCCGTTGCGGG CGCGCGTCTATGCGC ptrB 1995115 - 1993064 - | protease 2 yebE 1995987 - 1995328 - | hypothetical protein yebF 1996434 - 1996081 - | hypothetical protein TERM 2682 1996227 - 1996243 + g 91 -3.6 -5.56568 | TAACCCACGCGACCG GGTCAG CCTGC CCGACC TTTTTTTGGTCGTCT yebG 1996792 - 1996502 - | DNA damage-inducible protein YebG TERM 2683 1997996 - 1998010 + G 74 -11.4 -3.20345 | overlap 1997993 TGGTAAGCCTGAGAT CGACGG CAC CCGTCG TCTTGGTGTAGCGTT TERM 2684 1998081 - 1998071 - g 74 -4.6 -4.76312 | overlap 1998073 GATAAGAGCGAAAAA GGCC GCC AGCC GCGTGACGGTAAAAG purT 1996923 - 1998101 + | phosphoribosylglycinamide formyltransferase 2 TERM 2685 1998095 - 1998132 + T 80 -6.4 -4.83615 | gap 2, opp_overlap 1998096 1998097, overlap 1998096 1998096 CCGCGTGACGGTAAA AG-GCTAATG-CGCCATC GCCT GATGGCGACGTTAGCGCA TTTTTATCAGACCTG TERM 2686 1998096 - 1998131 + T 75 -9.9 -3.49687 | gap 2, opp_overlap 1998096 1998097, overlap 1998095 1998096 CGCGTGACGGTAAAA G-GCTAATG-CGCCATC GCCT GATGGCGACGTTAGCGC ATTTTTATCAGACCT TERM 2687 1998130 - 1998096 - T 73 -7.9 -4.13767 | gap 1, opp_overlap 1998096 1998096 1998095, overlap 1998097 CGCGTGACGGTAAAA GGCTAATG-CGCCATC GCCT GATGGCGACGTTAGCG CATTTTTATCAGACC TERM 2688 1998129 - 1998097 - T 75 -11.4 -3.08046 | gap 1, opp_overlap 1998096 1998096 1998095, overlap 1998096 GCGTGACGGTAAAAG GCTAATG-CGCCATC GCCT GATGGCGACGTTAGC GCATTTTTATCAGAC eda 1998842 - 1998201 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase edd 2000190 - 1998880 - | phosphogluconate dehydratase TERM 2689 2000410 - 2000392 - RH 71 -9.6 -3.16564 | CTGCGACCTGACCAA CCGCATTC ACG GAATGCAG GGCCTGACGAATAAT TERM 2690 2000847 - 2000822 - RH 89 -5.4 -5.80364 | gap 1 AGTGTAATAAAAAAA GCCTCGCA-GG TGAAT CCACACGAGGC TTAAAAGTGCAAAAA zwf 2002402 - 2000927 - | glucose-6-phosphate 1-dehydrogenase SC1892 2002375 - 2002560 + | hypothetical protein yebK 2002744 - 2003613 + | DNA-binding transcriptional regulator HexR TERM 2691 2003827 - 2003793 - g 71 -12.2 -2.52543 | opp_overlap 2003805, overlap 2003802 2003805 2003815 AGGCCCGGCAACTGA CCGCGATAACAACCTT GAG AAGGTTATCGCCGCGG GCGCAAACGTAGTAC pykA 2003737 - 2005179 + | pyruvate kinase TERM 2692 2005225 - 2005250 + F 100 -14.9 -4.56702 | opp_overlap 2005229, overlap 2005229 CAGGGTTTGTCAGCA TAAAGCCTCTC TTAC GAGAGGCTTTA TTTATTTGATTGACC TERM 2693 2005229 - 2005246 + F 100 -11.3 -4.82091 | opp_overlap 2005229, overlap 2005225 GTTTGTCAGCATAAA GCCTCTC TTAC GAGAGGC TTTATTTATTTGATT TERM 2694 2005246 - 2005229 - f 87 -11.3 -3.96148 | opp_overlap 2005225 2005229 GTTTGTCAGCATAAA GCCTCTC TTAC GAGAGGC TTTATTTATTTGATT SC1895 2005314 - 2005715 + | putative cytoplasmic protein TERM 2695 2006537 - 2006501 - g 100 -16.1 -3.54741 | opp_overlap 2006508, overlap 2006503 2006508 CACCAGGCCCTGAAA TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA GACAAAAAACTGTCA TERM 2696 2006535 - 2006503 - g 100 -16.5 -3.35046 | opp_overlap 2006508, overlap 2006501 2006508 CCAGGCCCTGAAATA CAAAACGCCCGATGA TGT TCATCAGGCGTTTTA CAGACAAAAAACTGT TERM 2697 2006530 - 2006508 - g 100 -14.2 -4.78848 | opp_overlap 2006508, overlap 2006503 2006501 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA TERM 2698 2006508 - 2006530 + G 91 -12 -4.07568 | opp_overlap 2006508 2006503 2006501 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA yis2 2005886 - 2006569 + | putative integrase protein msbB 2007625 - 2006570 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2699 2007191 - 2007207 + g 86 -3.7 -5.40072 | overlap 2007192 TTCCAGACCTTCCCA GTCAACA CGC TGTTGAA TTTTTTTCGGACCGC TERM 2700 2007638 - 2007616 - G 100 -13.4 -5.8901 | opp_overlap 2007616 2007637 ACACAAAACAAAAAA GCCGGCACAC ATC GCGTACCGGC TCTGTCAGCGCATTT yebA 2008974 - 2007655 - | hypothetical protein znuA 2009934 - 2008990 - | high-affinity zinc transporter periplasmic component TERM 2701 2009517 - 2009532 + g 76 -5.4 -4.77036 | TATATTCGCCGTGAT GGTGAT GTAC GTCACC TTTTTCCTCATCGGC TERM 2702 2010387 - 2010373 - g 73 -5.6 -4.65895 | GCGCCCATGCAAAAA CTCTCC GGC GGCGAG ACACAGCGCGTACTG znuC 2010013 - 2010768 + | high-affinity zinc transporter ATPase TERM 2703 2011031 - 2011043 + G 80 -10.5 -3.82202 | CTTACTGGGCATTAT GGCGC ACA GCGCC TTATCTTTAGGACTG znuB 2010765 - 2011550 + | high-affinity zinc transporter membrane component ruvB 2012639 - 2011629 - | Holliday junction DNA helicase B TERM 2704 2012674 - 2012654 - R 90 -13.9 -3.32844 | opp_overlap 2012647 2012646 TCCTTTACCTCATAA CGCGGCGCG TAA CGCGTCGCG AATCAGTGTTTCACT ruvA 2013259 - 2012648 - | Holliday junction DNA helicase motor protein TERM 2705 2013328 - 2013313 - H 79 -7.6 -4.47611 | TATCATAAAAAAAGA CTGGAT GTTT ATCCAG ATGAAAAACACGTTA SC1904 2013625 - 2014575 + | putative cytoplasmic protein SC1905 2015082 - 2014636 - | hypothetical protein ruvC 2016330 - 2015809 - | Holliday junction resolvase yebC 2017107 - 2016367 - | hypothetical protein TERM 2706 2017147 - 2017127 - R 79 -3.2 -5.40474 | gap 1, opp_overlap 2017128, overlap 2017128 ATTTCCTCAAAAAAA GCG-CGCCT TTTC AGGCGACGT TAATGACAAACTCTT ntpA 2017589 - 2017137 - | dATP pyrophosphohydrolase aspS 2019464 - 2017692 - | aspartyl-tRNA synthetase yecD 2019789 - 2020355 + | hypothetical protein TERM 2707 2020515 - 2020527 + G 80 -4.8 -5.01042 | opp_overlap 2020515 GGTATGCGCAAACTA CGGA CGATT TCCG TTTTTGCTTTAAATT TERM 2708 2021014 - 2021037 + G 74 -2.2 -4.98672 | opp_overlap 2021009, overlap 2021014 GTTGCAGAAACTCCC GCAGTGGCGG CAGA CCACCACGCC TTTTCTGTTTTTACA yecE 2020352 - 2021170 + | hypothetical protein TERM 2709 2021306 - 2021329 + G 88 -11 -4.11484 | gap 1, opp_overlap 2021303 CTTGCGAATGCAGTA CCG-TGTCGCC TAT GGCGACGGCGG TTTTAGCGAATTACA yecN 2021223 - 2021618 + | hypothetical protein TERM 2710 2021617 - 2021633 + F 71 -3.6 -4.85782 | overlap 2021618 TTTTCTCCCTGTATT AGCGCA CAATA TGCGCC TTTATTTTTCCCGGA yecO 2021659 - 2022402 + | hypothetical protein yecP 2022399 - 2023370 + | hypothetical protein TERM 2711 2023483 - 2023450 - T 86 -10.9 -3.794 | overlap 2023451 CGGCAACGCAGCAAA TCCCCGGGAACGTAG GTAG CTACGTGACCGGGGT GCGCGAGGCGGCCAA TERM 2712 2023482 - 2023451 - T 87 -14.4 -2.87319 | overlap 2023450 GGCAACGCAGCAAAT CCCCGGGAACGTAG GTAG CTACGTGACCGGGG TGCGCGAGGCGGCCA TERM 2713 2023558 - 2023534 - T 100 -10 -5.71983 | TGAAGGAGAAAAAAA GGCCCCTG TTGAATTGG CAGGGGCC TGGTACGAGCAAGCA TERM 2714 2023888 - 2023898 + T 84 -8.2 -4.56775 | ATTGATAAACCTTGC GCCG CAT CGGC TTTTTGCCCGGAAGT TERM 2715 2024175 - 2024161 - T 84 -7.8 -4.7373 | TCAGTGTAGTAAAAA TCCCCG CCG CGAGGA CGAATAATCGGATGT TERM 2716 2024263 - 2024228 - T 100 -17.7 -3.02144 | opp_overlap 2024218 2024236, overlap 2024236 GTACGCTGCGTAAGA CGCCGAAAGAAGGCG TAAGCC CCCCTTCTTTCGGCG CGGCGCACAGTTCGA yecM 2024940 - 2024371 - | hypothetical protein TERM 2717 2025137 - 2025154 + H 71 -9.8 -3.15544 | opp_overlap 2025133 2025132 AATTCTTAAACTGGC GCGGGC AATACA GCCCGC TTCATAAACGTAAGG argS 2025177 - 2026910 + | arginyl-tRNA synthetase TERM 2718 2026934 - 2026962 + F 100 -14.6 -5.06414 | opp_overlap 2026931 2026928 TCGTTAATATCATCA GGCCTGACTCCG GGTAA CGGACTCAGGCC TTTTTATTGCCACAG TERM 2719 2028241 - 2028256 + G 74 -3.2 -4.9792 | CACTAAAGCGATTGA GGAATC TGCG GATACC TTTTTCTATCAGGTC TERM 2720 2028423 - 2028410 - g 78 -2.3 -5.24129 | opp_overlap 2028413, overlap 2028411 2028412 CGGGTCCATAAAAAA GCCTG GTAT CAGGG CGATACCATCTCTGT TERM 2721 2028893 - 2028868 - g 86 -10.3 -4.09685 | CTTGATTCTGGAAAA CGGCGGAAGCG ACGG CGTTACCGCCG CGCCCATCATGCGAA pbpA 2027099 - 2028970 + | putative penicillin-binding protein SC1918 2030163 - 2029072 - | hypothetical protein flhE 2030792 - 2030400 - | flagellar protein flhA 2032870 - 2030792 - | flagellar biosynthesis protein FlhA TERM 2722 2031280 - 2031264 - G 74 -10.9 -3.5393 | AGGACTTTGTGTAAA GTCGTGA GGG TCACGAC GCCGGGGACCAGATC TERM 2723 2031859 - 2031871 + g 80 -4.7 -5.06414 | TTTTTACCGGCTGCG GCTCC TCT GGCGC TTTTTCTTCGCGCCC TERM 2724 2031957 - 2031935 - G 74 -2.7 -4.93696 | overlap 2031937 GGTAAAGAGTAAAAA TACCAGG TTAGGCATT CCTGGCA CCATGCCAAGCAGCC flhB 2034014 - 2032863 - | flagellar biosynthesis protein FlhB TERM 2725 2032914 - 2032894 - G 74 -6.8 -4.36914 | opp_overlap 2032901 TTCTCGTTCATAAAA TCCAGCGC TTCTG GCACCGGA AGGTTCTCAGGTTGT TERM 2726 2033617 - 2033628 + g 71 -7.2 -4.06055 | AACATGCGCTTAATT CCCG GCAG CGGG TTTAATTTAGAAAAT TERM 2727 2034155 - 2034124 - R 100 -17.5 -3.10493 | GCGTTAATAGAGATA GCCGGATACGATA AGAAAG TATCGTATCCGGC CGGGTTGACGGATTC cheZ 2034852 - 2034208 - | chemotaxis regulator CheZ cheY 2035252 - 2034863 - | chemotaxis regulatory protein CheY cheB 2036319 - 2035270 - | chemotaxis-specific methylesterase cheR 2037182 - 2036316 - | chemotaxis methyltransferase CheR TERM 2728 2036635 - 2036659 + g 74 -7.1 -4.28774 | opp_overlap 2036635 CCGCGCATGAAGTAA CGTTGTAGCTG CTG CGGCGATAACG TTTTCAGTTCGCTGA TERM 2729 2037117 - 2037131 + g 71 -11.4 -2.88999 | opp_overlap 2037107 2037106, overlap 2037119 AAAATGCGCGTCGGA CAGCGC GAG GCGCTG TGTCATCTGTAACAA cheM 2039228 - 2037336 - | methyl accepting chemotaxis protein II, aspartate sensor-receptor TERM 2730 2037904 - 2037922 + g 95 -5.2 -5.42862 | opp_overlap 2037905, overlap 2037905 GCAATACCGTCGATA ACGCTGAT AAT GTCAGCGA TTTTTTTCGAACTGT TERM 2731 2037905 - 2037921 + g 73 -8.7 -3.84633 | opp_overlap 2037905, overlap 2037904 CAATACCGTCGATAA CGCTGAT AAT GTCAGCG ATTTTTTTCGAACTG TERM 2732 2039198 - 2039230 + g 86 -12.7 -3.61715 | opp_overlap 2039163 2039191 2039200, overlap 2039199 AAGCATAACGGTGAA TATTGCCGAATGGCG CGA CGCCATCCGGCAACG TTATTACGCGACGTG TERM 2733 2039199 - 2039229 + g 83 -14 -2.76815 | opp_overlap 2039163 2039191 2039200, overlap 2039198 AGCATAACGGTGAAT ATTGCCGAATGGCG CGA CGCCATCCGGCAAC GTTATTACGCGACGT TERM 2734 2039228 - 2039200 - G 100 -19.7 -3.07233 | opp_overlap 2039199 2039198, overlap 2039163 2039191 GCATAACGGTGAATA TTGCCGAATGGCG CGA CGCCATCCGGCAA CGTTATTACGCGACG cheW 2039737 - 2039234 - | purine-binding chemotaxis protein TERM 2735 2039280 - 2039290 + g 70 -3.2 -4.74706 | AGCGCCATCTCTTCG CTGT TAA GCAG TTTTTCGATATTCAC cheA 2041773 - 2039758 - | chemotaxis protein CheA TERM 2736 2040538 - 2040549 + g 83 -7.2 -4.60924 | GACAGCATTTTTCCC CGCC TCAA GGCG TTTTTCCGGCATTTC TERM 2737 2041032 - 2041046 + g 70 -3.4 -4.6821 | opp_overlap 2041017, overlap 2041022 CTGCCGGAGGCGCTA CCGGCG CTA CCTCGG TTTTCTCTTGCGCTT motB 2042707 - 2041778 - | flagellar motor protein MotB TERM 2738 2042205 - 2042217 + g 70 -6.9 -4.11216 | overlap 2042206 ATATACGGCTCAACT TCGGC GCT GCCGG TTTTAAACATCGGGC TERM 2739 2042644 - 2042671 + g 70 -6.9 -4.07687 | gap 1, overlap 2042639 2042646 AGGAACCGTGCGCCC CGCCGCCGTGCG GTTTG TGC-CTGCGGCG TTTTACGACGACAAT TERM 2740 2042646 - 2042656 + g 71 -8.2 -3.91897 | overlap 2042639 2042644 GAACCGTGCGCCCCG CCGC CGT GCGG TTTGTGCCTGCGGCG motA 2043591 - 2042704 - | flagellar motor protein MotA TERM 2741 2043689 - 2043666 - R 100 -15.4 -5.86332 | opp_overlap 2043662 2043661 GCAAGGCAAAAAAAA GCAGCGGTAA TGAC TTACCGCTGC TGGAGTGTTTGTCCA flhC 2044300 - 2043716 - | transcriptional activator FlhC flhD 2044647 - 2044297 - | transcriptional activator FlhD TERM 2742 2044911 - 2044930 + H 73 -8 -4.08945 | opp_overlap 2044911 GGCGATTTTAGAAAA TATGTGAT GCAG ATCACATA TTTTAACGGGATACT TERM 2743 2044930 - 2044911 - H 79 -8 -4.4009 | opp_overlap 2044911 GGCGATTTTAGAAAA TATGTGAT GCAG ATCACATA TTTTAACGGGATACT SC1933 2045320 - 2045436 + | putative cytoplasmic protein yecG 2045433 - 2045861 + | universal stress protein UspC otsA 2047300 - 2045879 - | trehalose-6-phosphate synthase TERM 2744 2045980 - 2045967 - GT 72 -3.8 -4.71828 | opp_overlap 2045967 AGGTCATGAATAAAA CGCT CCTGCC AGCG GTTAATGTCATTTTT TERM 2745 2047244 - 2047222 - GT 86 -14.8 -2.71364 | opp_overlap 2047222 2047229, overlap 2047193 2047194 TTAGCGCGCCAAGCA CGCCAACGGC GAG GCCGCCGGCG CCGCCTTTATTATCC TERM 2746 2047229 - 2047249 + gT 81 -8.1 -4.30719 | opp_overlap 2047193 2047194 2047222, overlap 2047222 GCCAAGCACGCCAAC GGCGAGGCC GCC GGCGCCGCC TTTATTATCCGGGGG otsB 2048078 - 2047275 - | trehalose-6-phosphate phosphatase TERM 2747 2047513 - 2047499 - G 81 -7.1 -4.82901 | CGTCGCCCACAAAAA CGGGA ATCCG TCCCG CAAAGGGCGCCTCCT TERM 2748 2048206 - 2048172 - R 100 -14.4 -3.91897 | gap 1, overlap 2048174 2048175 CTCGCCATTTAGAAA GACCATCGCCAGCCG GGGTAG CGGCTGGCGATGA-C GTGAAGCTATACTGT TERM 2749 2048205 - 2048174 - R 100 -18.1 -3.5511 | overlap 2048172 2048175 CGCCATTTAGAAAGA CCATCGCCAGCCG GGGTAG CGGCTGGCGATGA CGTGAAGCTATACTG TERM 2750 2048204 - 2048175 - R 100 -19.4 -2.72745 | overlap 2048174 2048172 GCCATTTAGAAAGAC CATCGCCAGCCG GGGTAG CGGCTGGCGATG ACGTGAAGCTATACT araH 2049151 - 2048594 - | hypothetical protein ftnB 2049702 - 2050205 + | ferritin-like protein rpi 2051022 - 2050384 - | hypothetical protein TERM 2751 2051131 - 2051109 - H 72 -10.8 -2.80622 | opp_overlap 2051113, overlap 2051108 AACACCCATTCAAAT TTAATGAAAC TAA GTTTCATTAA GTGAAGAGACGCTCA yecR 2051278 - 2051613 + | putative outer membrane lipoprotein TERM 2752 2051598 - 2051619 + F 73 -10.9 -2.52464 | opp_overlap 2051597 2051614 CGTCCCGCAAATTAT GCCGCTTTA TTAT TAAGGCGGC TGGCTTAACGCCGAC TERM 2753 2051671 - 2051690 + F 95 -12.2 -4.35747 | TGCAGGGTCGCTATT GCCAGCAT GAAG ATGCTGGC TTTCCTTTATTTTTA ftn 2051853 - 2052350 + | ferritin yecH 2052635 - 2052396 - | hypothetical protein TERM 2754 2052445 - 2052433 - G 71 -4.8 -4.57569 | TCATGCGTTGAAAAA CCGT CCTCC ACGG CAATAAACTTTCCTT TERM 2755 2052530 - 2052545 + g 75 -6 -4.63932 | TGTGAAATCGTGCCC GCTCGC CAAA GCGCGC TTTTATTGCCGCCTC TERM 2756 2053823 - 2053833 + G 71 -8.2 -3.786 | overlap 2053821 TGATTACCTTTCTGC CGCC GCT GGCG TTTGCACTTTTCTAC TERM 2757 2053982 - 2054001 + G 85 -11.4 -4.03978 | GTGTGGCAGGCGGCA CGCCAGCG CTGG CGCTGGTG TTTATCTGCGGCATT tyrP 2052862 - 2054073 + | HAAAP family tyrosine-specific transport protein TERM 2758 2054121 - 2054085 - T 100 -18.1 -3.66874 | TTAATGCCAGGCAAA GATTACCGGGCCCGGAC GCC GTCCAGGCTCGATAATC GTCACGCTATGGCCG yecA 2054813 - 2054148 - | hypothetical protein TERM 2759 2055031 - 2055012 - R 75 -6.4 -4.52589 | opp_overlap 2055012 2055010 2055008 TCGCCCCACACAAAA GCGAGAGA TAGG TTTCTCGC TATATTATACTCATG SC1946 2057575 - 2057243 - | hypothetical protein TERM 2760 2057684 - 2057697 + H 79 -2.3 -5.60864 | overlap 2057653 2057652 CTGTACTGGCAGAAA TGCCG CTAC CGGTG TTTTTTTACTGTGTA TERM 2761 2057781 - 2057768 - H 100 -8.1 -5.66684 | opp_overlap 2057768 GAAGGCACAAAAAAA CCACC CGTA GGTGG TTTCACGACACTGCT TERM 2762 2057995 - 2058010 + G 74 -7.6 -4.07885 | CCGCTTTGTTAACGC GCCAAA TTTT TTTGGC TTTTCAGCCAGAATC SC1947 2057804 - 2058154 + | hypothetical protein pgsA 2058825 - 2058277 - | phosphatidylglycerophosphate synthetase TERM 2763 2058725 - 2058714 - G 71 -4.4 -4.67943 | overlap 2058715 2058717 CGGCAATACAGAAAA TCAG CGCG CTGA CCATCGGCGCCCAGG uvrC 2060714 - 2058882 - | excinuclease ABC subunit C TERM 2764 2059295 - 2059307 + g 70 -6.9 -4.09864 | AAACGGCTTTCGCCT GGGCG AGC TGCCC TTTTCCGCCGTCGAT TERM 2765 2059628 - 2059676 + g 78 -6.6 -4.53303 | opp_overlap 2059621 2059657 TGATTAAGGCCGTTG CCGCGTTG-GTCCGCGCCAGCTTG AGA TAA-CGGGCGCGATCGCCACGCGG TTTTGTCTGGACATG sirA 2061367 - 2060711 - | response regulator TERM 2766 2061045 - 2061055 + gH 72 -8.2 -3.74693 | opp_overlap 2061027, overlap 2061027 CTCACCACCTCCTGA GGCG CAG CGCC TTTGCTGAGATAGCC SC1951 2061338 - 2061451 + | hypothetical protein SC1952 2061679 - 2061834 + | hypothetical protein yecF 2061831 - 2062055 + | hypothetical protein TERM 2767 2062063 - 2062089 + T 88 -12.2 -3.63627 | opp_overlap 2062041 2062063 GCCAGTAGTAAAAAA CCGGCTGTTAGC ATC GCTTTCAGCCGG TTTCGCGTCTGGCGC TERM 2768 2062089 - 2062063 - T 100 -12.2 -5.1861 | opp_overlap 2062063, overlap 2062041 GCCAGTAGTAAAAAA CCGGCTGTTAGC ATC GCTTTCAGCCGG TTTCGCGTCTGGCGC sdiA 2062844 - 2062122 - | DNA-binding transcriptional activator SdiA yecC 2063829 - 2063077 - | putative amino-acid ABC transporter ATP-binding protein YecC yecS 2064494 - 2063826 - | putative ABC-type amino acid transporter, permease component yedO 2065501 - 2064515 - | D-cysteine desulfhydrase TERM 2769 2065585 - 2065568 - R 89 -5.5 -5.67283 | gap 1, opp_overlap 2065568 AACGGAAATAAAAAA GGCGC-CG ATT CACGCGCC TCCGTTTGCTGACAT fliY 2066413 - 2065655 - | cystine transporter subunit fliZ 2067153 - 2066602 - | protein FliZ fliA 2067931 - 2067212 - | flagellar biosynthesis sigma factor TERM 2770 2068120 - 2068097 - R 87 -10.2 -4.04318 | GCCAGATAGGATAAA CGGGATGCGC AAAA GCCCACCCCG AACAAAACTATGTCA fliB 2069333 - 2068128 - | N-methylation of lysine residues in flagellin TERM 2771 2068372 - 2068393 + g 73 -5.9 -4.37886 | overlap 2068372 TCGACATTCGGCTGG TTGGGGAAA TTAT TTTCCCAAA TTTTATAGAGAATCA TERM 2772 2069358 - 2069373 + r 79 -10.4 -3.49618 | opp_overlap 2069358 TCCGGAATTAAAAAA GGCAGC TTTC GCTGCC TTGATTGTGTACCAC TERM 2773 2069373 - 2069358 - R 100 -10.4 -5.26875 | opp_overlap 2069358 TCCGGAATTAAAAAA GGCAGC TTTC GCTGCC TTGATTGTGTACCAC fliC+F2048 2070917 - 2069412 - | flagellin TERM 2774 2070495 - 2070509 + g 71 -10 -3.55622 | GATGGTCAGAGTGTT GTCCTG CGC CAGGAC TTTCACGCCGTTGAA SC1963 2071156 - 2070935 - | hypothetical protein TERM 2775 2071048 - 2071063 + g 71 -7.5 -3.95555 | CGATCTTTTTCTTAG GCGGC GAAATA GCCGC TTTATGCATCATTAT fliD 2071174 - 2072577 + | flagellar capping protein fliS 2072592 - 2072999 + | flagellar protein FliS fliT 2072999 - 2073367 + | flagellar biosynthesis protein FliT TERM 2776 2073440 - 2073391 - f 100 -16.6 -4.25104 | opp_overlap 2073409, overlap 2073392 CGTCTCGTATGAAAA TTCTTCCATACTCCAGAGGTCG GCTAAA CGACTTCTGGAGCACGGAAGAT GAAAAACCCCACGTT TERM 2777 2073439 - 2073392 - f 100 -20.1 -3.14848 | opp_overlap 2073409, overlap 2073391 GTCTCGTATGAAAAT TCTTCCATACTCCAGAGGTCG GCTAAA CGACTTCTGGAGCACGGAAGA TGAAAAACCCCACGT TERM 2778 2073693 - 2073679 - g 82 -11.4 -3.88559 | opp_overlap 2073669, overlap 2073669 2073666 AAGTACGGCGATAAA CGCCAG TTA CTGGCG GCGATAGACGCGCTC TERM 2779 2073790 - 2073775 - g 74 -4.7 -4.8048 | GGCGCAGACGAAAAA GAACG TATTCG CGTTC AGCGCGTGAATCAGG amyA 2073439 - 2074923 + | cytoplasmic alpha-amylase TERM 2780 2074975 - 2074988 + T 82 -5.9 -5.24129 | opp_overlap 2074966, overlap 2074934 2074968 AAATTACGGCAGCGG CGTCG GCAG CGGCG TTTTTTCTAACGCGG yedD 2075376 - 2074963 - | hypothetical protein TERM 2781 2075280 - 2075294 + g 70 -7 -4.08945 | AGTACCCTTCCAGAC CGGCCG GCG CGGGCG TTTTCACCACATCAT TERM 2782 2075694 - 2075715 + G 80 -8.7 -4.20883 | opp_overlap 2075698 GCCGTGACGGGCGAA TTTACCCGC TGGG GCGGGCAAA TTTTGCAGCTTTTTG TERM 2783 2075945 - 2075969 + G 77 -4.1 -5.0133 | CTTCGGCGCGCGTCT GGCGATGGGGT GTA ACCTGGCCGCC TTTTTTACCGGAATC yedE 2075502 - 2076767 + | putative inner membrane protein yedF 2076764 - 2076997 + | hypothetical protein TERM 2784 2077003 - 2077031 + F 70 -9.5 -3.05597 | opp_overlap 2077000, overlap 2077002 TCAAAAATAAGCGCA TACTCCCGCTGTA CGT TACGGCGGGAGAC CTTTTACGGCATAAC SC1971 2077295 - 2077648 + | hypothetical protein fliE 2078083 - 2077769 - | flagellar hook-basal body protein FliE SC1973 2078279 - 2078130 - | hypothetical protein TERM 2785 2079360 - 2079330 - g 76 -9 -3.93004 | AGAATACGCCACAAA CCAGCACCAGTACC AAC AGTAACAGTGCTGG CCCGCGCAATACGCA TERM 2786 2079546 - 2079561 + G 72 -2.5 -4.91109 | AGATCGAGGATTTAA CCCGT GAAGCG ATGGG TTTTTCTGATAAACG fliF 2078300 - 2079982 + | flagellar MS-ring protein TERM 2787 2080070 - 2080034 - g 84 -13.8 -3.03441 | gap 1 GACCATTGGCGAAGA CCGGGCGGCAGAGGTGT TTAA ACACCTCT-CCACCCGC GAAGTACAAGCGTTA fliG 2079975 - 2080970 + | flagellar motor switch protein G TERM 2788 2081586 - 2081637 + G 74 -10.3 -3.50393 | gap 3, opp_overlap 2081585, overlap 2081585 CGGCGGGTGTAAAGT CTCT-GCCGATGAG-GGCGAT-CTGG ACG CCAGCGTCGCCACTCGCTGGCAAGAG TTGTGTCGCCTGGCG fliH 2080963 - 2081670 + | flagellar assembly protein H TERM 2789 2081737 - 2081749 + G 73 -10.5 -3.3506 | overlap 2081728 AAATGGCGTTATTGC CGGCG GTG CGCCG TTATGGACGTTTAAC fliI 2081670 - 2083040 + | flagellum-specific ATP synthase fliJ 2083062 - 2083505 + | flagellar biosynthesis chaperone TERM 2790 2084132 - 2084091 - g 70 -5 -4.49644 | gap 2, overlap 2084092 ATGAAAAAGGGAAAA CCGAGGCGTCGCTTGCGCGC GCCA GCG-ACGATCG-CGCCACGG GGCCATCACTGACGC fliK 2083502 - 2084719 + | flagellar hook-length control protein TERM 2791 2084861 - 2084850 - g 84 -5.8 -5.1356 | opp_overlap 2084849 CGCGATTAACAAAAA GAGC AAAC GCTC GATTTGGATACCTTT TERM 2792 2084975 - 2084991 + G 74 -2.1 -5.05782 | opp_overlap 2084962 2084944, overlap 2084977 AAGCGGAACCGGCTC CACCGCC CGC GCCGGTA TTTTTTGCGCTGGAT fliL 2084824 - 2085291 + | flagellar basal body-associated protein FliL TERM 2793 2085690 - 2085703 + G 71 -9.5 -3.53224 | TCGATAACCTGTTCG GCGGC GACG GCCGC TTTCCGACCAAAGTC fliM 2085296 - 2086300 + | flagellar motor switch protein FliM TERM 2794 2086430 - 2086394 - g 86 -7.2 -4.73613 | gap 1, opp_overlap 2086397, overlap 2086395 CGACCACCAATAAAA GCGCCGCCGACGCGGTT TTCC AACAGCTT-GGCGGCGG CGATGTCAGCGGTGC TERM 2795 2086429 - 2086395 - g 73 -10.7 -3.43445 | gap 1, opp_overlap 2086397, overlap 2086394 GACCACCAATAAAAG CGCCGCCGACGCGGTT TTCC AACAGCTT-GGCGGCG GCGATGTCAGCGGTG TERM 2796 2086397 - 2086408 + G 74 -7.2 -4.08692 | opp_overlap 2086395 2086394 CCACCAATAAAAGCG CCGC CGAC GCGG TTTTCCAACAGCTTG fliN 2086297 - 2086710 + | flagellar motor switch protein FliN TERM 2797 2086757 - 2086784 + G 80 -12 -3.38727 | overlap 2086747 2086780 CACCGCGCCAGCCGG TTCGCCGCTCAT GCAG GTGAGCGGCGCA TTAATTGGCATTATT fliO 2086710 - 2087087 + | flagellar biosynthesis protein FliO TERM 2798 2087212 - 2087222 + G 74 -6.8 -4.26903 | opp_overlap 2087197 CTGGTCATTATCCGT CCAG ACG CTGG TTTTCATCACCTCGC TERM 2799 2087506 - 2087462 - g 95 -14.3 -3.18383 | opp_overlap 2087474 2087475 2087501 2087503, overlap 2087474 ATTTCTATGCAGGAA GCGCTGGATAAAGGCGCGCAA CCG TTACGCGCGTTCATGCTGCGC CAAACCCGCGAAGCC fliP 2087087 - 2087824 + | flagellar biosynthesis protein FliP fliQ 2087834 - 2088103 + | flagellar biosynthesis protein FliQ fliR 2088112 - 2088906 + | flagellar biosynthesis protein FliR rcsA 2089188 - 2089811 + | capsular/exo- polysaccharide synthesis transcriptional regulator dsrB 2090044 - 2089850 - | hypothetical protein TERM 2800 2089991 - 2090013 + g 100 -16.2 -4.14392 | TGCCAGTACCACGCC CGGTCGGCGG GGA CCGCCGTCCG TTTTAACGGTTACCC yodD 2090173 - 2090400 + | hypothetical protein TERM 2801 2090437 - 2090417 - f 100 -8.9 -5.41746 | overlap 2090405 2090404 AATGGCCGAAAAAAA TCCCGGCCC TAC GGATCGGGA TCAAACTTGCTTATG yedP 2090710 - 2091525 + | mannosyl-3-phosphoglycerate phosphatase yedQ 2093216 - 2091504 - | hypothetical protein TERM 2802 2092568 - 2092548 - G 70 -8.9 -3.64703 | opp_overlap 2092526 2092538, overlap 2092530 2092526 CTGTGCGGAGGTAAA CCACCGCAC GCC GCGCTGTGG GTTACGCCGTTGGCT TERM 2803 2093356 - 2093375 + r 100 -12.1 -4.4648 | opp_overlap 2093356 TTCTCCACAGCAAAA CGCCCGG CATTAA CCGGGCG TTTTGTCATCGGGCT TERM 2804 2093375 - 2093356 - R 95 -12.8 -4.34402 | opp_overlap 2093356 TTCTCCACAGCAAAA CGCCCGGC ATTA ACCGGGCG TTTTGTCATCGGGCT yodC 2093626 - 2093381 - | hypothetical protein TERM 2805 2094623 - 2094638 + H 72 -3.2 -5.06414 | overlap 2094619 AATGCCGAAACCGGT GGCG CGGGTCAA CGCC TTTTTATTCCAAAAG yedA 2094730 - 2095650 + | hypothetical protein vsr 2096109 - 2095639 - | DNA mismatch endonuclease, patch repair protein TERM 2806 2095666 - 2095702 + g 76 -12.4 -3.02144 | gap 2, opp_overlap 2095657 2095656 ATGAATCCCCTGGGT GTCGATCTGCGCGCTGGC GCC GCC-GC-CGCAGATCCAC TCTTCCAGGCGCTCC dcm 2097520 - 2096090 - | DNA cytosine methylase TERM 2807 2096485 - 2096495 + g 71 -4.6 -4.62069 | overlap 2096482 CAAAACCGTTTCCCC GCGC CTG GTGC TTTTTCGCGTAGCGA TERM 2808 2096920 - 2096942 + g 76 -3.2 -5.06414 | opp_overlap 2096921, overlap 2096921 2096923 GAGTCTCGCAGGCAA AGCCGTGGGC GCG GCCCAGCGCA TTTTTCTTAGAAACG yedJ 2098289 - 2097594 - | hypothetical protein yedR 2098680 - 2098369 - | hypothetical protein TERM 2809 2098407 - 2098423 + g 75 -5.7 -4.56597 | TTTCTGGCTGAGTGT CGGCGGG ATA CCCCCTG TTTTTGCGAGGCCGG TERM 2810 2099007 - 2099022 + H 100 -10.4 -6.25741 | opp_overlap 2099007 TCATTACCCACATTA CCGGCA TTTA TGCCGG TTTTTTTTATTCTTT TERM 2811 2099022 - 2099007 - H 71 -10.4 -2.65264 | opp_overlap 2099007 TCATTACCCACATTA CCGGCA TTTA TGCCGG TTTTTTTTATTCTTT ompS 2099330 - 2100523 + | putative porin TERM 2812 2100540 - 2100564 + T 100 -17.9 -3.78934 | opp_overlap 2100543, overlap 2100543 ACGCTTTATGTTATT CAAGCCCGTGC TTA GCGCGGGCTTG TTATTATAGGGCAAG TERM 2813 2100561 - 2100543 - T 78 -11.6 -3.06796 | opp_overlap 2100540 2100543 CTTTATGTTATTCAA GCCCGTGC TTA GCGCGGGC TTGTTATTATAGGGC TERM 2814 2100543 - 2100561 + T 100 -13.8 -4.02817 | opp_overlap 2100543, overlap 2100540 CTTTATGTTATTCAA GCCCGTGC TTA GCGCGGGC TTGTTATTATAGGGC TERM 2815 2100772 - 2100758 - T 87 -7.1 -5.24129 | opp_overlap 2100758 TCCGGGCATAAAAAA GCTCC TGTAC GGAGC TAATATGAATTATTT cspB 2101192 - 2100782 - | putative cold-shock protein umuC 2102915 - 2101647 - | DNA polymerase V subunit UmuC TERM 2816 2101892 - 2101918 + g 71 -5.9 -4.37658 | gap 1 GCATCACCCCCGCTT TCTGGTAGCGAT GGCC GTCGC-GCCAGA TTTTATCCAGGCATT umuD 2103337 - 2102918 - | DNA polymerase V subunit UmuD SC2002 2103625 - 2103464 - | hypothetical protein yeeI 2104086 - 2104817 + | hypothetical protein TERM 2817 2105067 - 2105096 + F 83 -13.7 -2.73529 | opp_overlap 2105071, overlap 2105063 2105071 AGGAGCCAAATTTAG GGAAGCAGACGTT CACT GACGTCTGCTTTC TGCATTTATATCAAC TERM 2818 2105092 - 2105071 - f 73 -10.2 -3.11732 | opp_overlap 2105067 2105063 2105071 GCCAAATTTAGGGAA GCAGACGT TCACTG ACGTCTGC TTTCTGCATTTATAT TERM 2819 2105071 - 2105092 + F 89 -10.9 -4.04922 | opp_overlap 2105071, overlap 2105067 2105063 GCCAAATTTAGGGAA GCAGACGTT CACT GACGTCTGC TTTCTGCATTTATAT SC2004 2105173 - 2105343 + | hypothetical protein int 2105357 - 2105545 + | putative P4-type integrase SC2006 2105656 - 2105552 - | hypothetical protein TERM 2820 2105855 - 2105867 + H 73 -4.1 -4.82901 | ATTAGATCAAAACTT CAACG CTT TGTTG TTTTTGTCAGCAAAC TERM 2821 2106093 - 2106120 + H 100 -12 -5.05782 | AATAAATTATCTTTA CCCGGTTGACCT GAGA AGGTTTACCGGG TTTTTTGACATCCAT TERM 2822 2106314 - 2106303 - H 80 -7.2 -4.58585 | overlap 2106304 CACCGAAAGAAGAAA CGCC GCCC GGCG CGCCGGAGAAATACG TERM 2823 2106854 - 2106809 - H 78 -12 -3.05384 | gap 1, opp_overlap 2106795, overlap 2106835 GCGCCCGGCACTCAA CCGGTGCGTCACTTTCGTCGC GCAAA GCGAC-AAAGTGACGCACAAC CACTACACCGCGCCA SC2008 2107147 - 2107845 + | putative branched chain amino acid transport protein SC2009 2107730 - 2107978 + | hypothetical protein SC2010 2108324 - 2108166 - | hypothetical protein TERM 2824 2108940 - 2108927 - g 74 -2.3 -5.00027 | ATGAAAAAGACAAAA TAGCG GAAA CGCTG ACGTTTAAAGATGGT TERM 2825 2109364 - 2109354 - g 74 -6.8 -4.2558 | GAGCTGGTATGAAAA TGGG CAT CCCA AAGAAGAATCCTCTT TERM 2826 2109633 - 2109615 - g 74 -2.3 -5.00846 | TAAAGACGATAAAAA GCAGGGA GCCGA TCGCCGC TGGAGCGAACGTACC ybeQ 2108419 - 2110356 + | TPR repeat-containing protein SC2012 2110413 - 2112143 + | putative periplasmic protein TERM 2827 2112199 - 2112148 - Tf 80 -13.1 -2.52896 | gap 2 CCACGCCTTAATCGA TTTACCCGCCCGGCCACCTTTCTCA CATG CGGG-AAGGCGGC-GGGCGGGAAAA ATCAATCGCGGAAGT yajQ 2112305 - 2112201 - | hypothetical protein SC2013 2112174 - 2112308 + | hypothetical protein SC2015 2112353 - 2112526 + | hypothetical protein SC2016 2112931 - 2112677 - | hypothetical protein TERM 2828 2112975 - 2112932 - R 71 -9.6 -3.29461 | opp_overlap 2112936, overlap 2112935 2112936 GAAGCCGCGGCACAA TAAGGCCTTAACGGGATACA GAAC CGCCTCCCGCTAAGGCTTCA TTCAGCCACTTTCCA TERM 2829 2112972 - 2112935 - R 76 -9.1 -3.78934 | opp_overlap 2112936, overlap 2112932 2112936 GCCGCGGCACAATAA GGCCTTAACGGGATACA GAAC CGCCTCCCGCTAAGGCT TCATTCAGCCACTTT TERM 2830 2112971 - 2112936 - R 79 -12.6 -2.87146 | opp_overlap 2112936, overlap 2112935 2112932 CCGCGGCACAATAAG GCCTTAACGGGATACA GAAC CGCCTCCCGCTAAGGC TTCATTCAGCCACTT amn 2114502 - 2113048 - | AMP nucleosidase TERM 2831 2113256 - 2113233 - G 83 -8 -4.40003 | overlap 2113234 2113236 TGTCAGAAACACAAA GCAGCGTGCC GTAA GGCACGCGGA AGCGATAGCCCTGGG TERM 2832 2113255 - 2113234 - G 74 -11.5 -3.23279 | overlap 2113233 2113236 GTCAGAAACACAAAG CAGCGTGCC GTAA GGCACGCGG AAGCGATAGCCCTGG TERM 2833 2113253 - 2113236 - G 83 -12.7 -3.16835 | overlap 2113234 2113233 CAGAAACACAAAGCA GCGTGCC GTAA GGCACGC GGAAGCGATAGCCCT SC2018 2115024 - 2114698 - | putative cytoplasmic protein SC2019 2115404 - 2115018 - | hypothetical protein SC2020 2115481 - 2115401 - | hypothetical protein TERM 2834 2115837 - 2115810 - R 100 -12 -5.05782 | ATGGATGTCAAAAAA CCCGGTAAACCT TCTC AGGTCAACCGGG TAAAGATAATTTATT yeeO 2117574 - 2116117 - | hypothetical protein TERM 2835 2116196 - 2116180 - G 77 -7.9 -4.27617 | overlap 2116182 CAGACGCCAGTAAAA CAGTGCG CCA CGCACGG CCCAGTCAAGAAACA TERM 2836 2116194 - 2116182 - G 70 -9.1 -3.73756 | overlap 2116180 GACGCCAGTAAAACA GTGCG CCA CGCAC GGCCCAGTCAAGAAA SC2022 2117984 - 2117814 - | hypothetical protein TERM 2837 2117873 - 2117900 + g 100 -9.8 -5.00884 | AAGAACTTATCTTTA CCCGGTTGACCT GATA AGGTTTGCCGGG TTTTTTGACGCCCAT erfK 2118964 - 2118035 - | hypothetical protein cobT 2120142 - 2119042 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobS 2120882 - 2120139 - | cobalamin synthase TERM 2838 2120464 - 2120423 - G 100 -10.7 -4.75472 | gap 1 GGTACATCAATAAAA CGGCGCTG-CCGCGTCCGGC CGC ACAGGCCGCCGCCAACGCCG CCAACATTGGCGTTC cobU 2121424 - 2120879 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase cbiP 2122941 - 2121421 - | cobyric acid synthase TERM 2839 2122457 - 2122419 - G 76 -9.7 -3.86346 | gap 2, overlap 2122421 CCAGCGTGCCATAAA TAGCGGCGAATA-CG-CCG CCC CGGTCGATATCCGCCACCA GAATAACCGGACACT TERM 2840 2122436 - 2122421 - G 81 -11.8 -3.52113 | overlap 2122419 AGCGTGCCATAAATA GCGGCG AATA CGCCGC CCCGGTCGATATCCG TERM 2841 2122885 - 2122866 - G 79 -2.7 -5.252 | overlap 2122867 2122877 2122878 CATCCTGATAAAAAA TGCGGCA TAAACC CGCCGCT AGCACACTTTTGCCG cbiO 2123579 - 2122938 - | synthesis of vitamin B12 adenosyl cobalamide precursor cboQ 2124442 - 2123762 - | synthesis of vitamin B12 adenosyl cobalamide precursor TERM 2842 2123916 - 2123904 - G 71 -4.8 -4.56133 | overlap 2123899 CTGCAATAACCAAAA CGCA GCGTT TGCG CACGACGGATTGCCA TERM 2843 2124394 - 2124377 - G 76 -5.5 -4.81551 | opp_overlap 2124380 2124380, overlap 2124378 CAGCCACAGCAAAAA CTTGCGC TGCG GCGCAAC GTGTGCCCAGCGGCT cbiN 2124707 - 2124426 - | cobalt transport protein CbiN cbiM 2125356 - 2124709 - | cobalt transport protein CbiM TERM 2844 2124949 - 2124936 - G 75 -3.7 -4.96848 | overlap 2124938 TCGCGCACAGAAAAA CAGCG ACAT CGCGG CGCAGTCCGGCACGG cbiL 2126156 - 2125443 - | cobalt-precorrin-2 C(20)-methyltransferase TERM 2845 2125844 - 2125832 - G 91 -4.1 -5.52384 | GCTGGAGTAAAAAAA TCCAG GTA CTGAA TAGCATCGCATCGCC TERM 2846 2126098 - 2126084 - G 79 -11.4 -3.68569 | opp_overlap 2126082 CCAGCGAGCCAAGAA TCCGCG CTG CGCGGA CGGTTATCAGGTCAG cbiK 2126947 - 2126153 - | synthesis of vitamin B12 adenosyl cobalamide precursor TERM 2847 2126212 - 2126225 + g 86 -9.5 -4.36914 | opp_overlap 2126197 2126210 GCGCGACAAACATCG CCCGG ATAG CCGGG TTTTCTCCCAGCCCG cbiJ 2127741 - 2126950 - | cobalt-precorrin-6x reductase cbiH 2128463 - 2127738 - | precorrin-3B C17-methyltransferase TERM 2848 2127969 - 2127984 + g 78 -11.8 -3.28924 | opp_overlap 2127945 CAGATGCCCTTCGCG CCCGCG GCTG CGCGGG TTGTAAAAACAGATA cbiG 2129518 - 2128463 - | cobalamin biosynthesis protein CbiG TERM 2849 2128670 - 2128696 + g 76 -2.9 -5.03314 | CACGCGGCAGCAGGA GGCGAGCTG AATAAGCCC CGGCTCCCC TTTTTTGAGCGTGAC cbiF 2130272 - 2129499 - | synthesis of vitamin B12 adenosyl cobalamide precursor cbiT 2130834 - 2130256 - | cobalt-precorrin-6Y C(15)-methyltransferase cbiE 2131429 - 2130824 - | cobalt-precorrin-6Y C(5)-methyltransferase TERM 2850 2131211 - 2131199 - G 75 -6.9 -4.43189 | ACCAATGCCATAAAA CAGCG GAT CGCCG GAGGCCAGCACCACG cbiD 2132562 - 2131423 - | cobalt-precorrin-6A synthase TERM 2851 2131503 - 2131520 + g 71 -6.2 -4.25104 | opp_overlap 2131514 AAGAAAACAGGATGG CGTCGC AGACAG GCGGCG TTTTGGTAAAACGCA cbiC 2133194 - 2132562 - | precorrin-8X methylmutase cobD 2134164 - 2133205 - | cobalamin biosynthesis protein cbiA 2135540 - 2134161 - | cobyrinic acid a,c-diamide synthase TERM 2852 2134432 - 2134450 + g 77 -7.4 -4.34402 | opp_overlap 2134431 2134427 2134426 2134432, overlap 2134433 TCACAGTAACCAAAG CGGGTAAG TCG CTTACCCA TTTTGCTGTGACCGG TERM 2853 2134433 - 2134449 + g 71 -10.9 -3.2032 | opp_overlap 2134432 2134431 2134427 2134426, overlap 2134432 CACAGTAACCAAAGC GGGTAAG TCG CTTACCC ATTTTGCTGTGACCG TERM 2854 2135432 - 2135444 + g 95 -10.5 -4.56775 | opp_overlap 2135424 CTTTAAACGGCTGTA CGCGC AGC GCGCG TTTTTGCAGCAGCCT pocR 2137049 - 2136138 - | propanediol utilization transcriptional regulator TERM 2855 2136440 - 2136461 + g 89 -2.9 -5.48054 | opp_overlap 2136440 2136451 GATCGTCGGACAAAT GCGCATC AATATAGC GAAGCGC TTTTTTCATTTTACT TERM 2856 2137153 - 2137185 + r 80 -13 -2.56596 | gap 1, opp_overlap 2137153 2137159, overlap 2137158 2137159 AGTACAATGACAATA TCAAAA-GTCTCCCA TTGC TGGGAGACGTTTTGA TCAGTTCGTGAAAGC TERM 2857 2137185 - 2137153 - R 86 -13 -3.36046 | gap 1, opp_overlap 2137153 2137158 2137159, overlap 2137159 AGTACAATGACAATA TCAAAA-GTCTCCCA TTGC TGGGAGACGTTTTGA TCAGTTCGTGAAAGC TERM 2858 2137158 - 2137179 + r 79 -8.7 -4.31379 | opp_overlap 2137153 2137159, overlap 2137153 2137159 AATGACAATATCAAA AGTCTCCCA TTGC TGGGAGACG TTTTGATCAGTTCGT TERM 2859 2137178 - 2137159 - R 100 -12.2 -4.47259 | opp_overlap 2137158 2137153 2137159, overlap 2137153 ATGACAATATCAAAA GTCTCCCA TTGC TGGGAGAC GTTTTGATCAGTTCG TERM 2860 2137159 - 2137178 + r 81 -12.2 -3.18105 | opp_overlap 2137159 2137153, overlap 2137158 2137153 ATGACAATATCAAAA GTCTCCCA TTGC TGGGAGAC GTTTTGATCAGTTCG pduF 2138378 - 2137266 - | propanediol utilization: propanediol diffusion facilitator pduA 2138585 - 2138869 + | propanediol utilization: polyhedral bodies pudB 2138866 - 2139678 + | propanediol utilization: polyhedral bodies TERM 2861 2139845 - 2139824 - g 72 -2.3 -4.84017 | gap 1, overlap 2139826 AACCGTCGATAAAAA TCG-TTAACG GCG CGGTAACCGA GCTGGACGGAAAACC TERM 2862 2140126 - 2140091 - g 70 -5.3 -4.42386 | overlap 2140092 TGGCGATGCAGAAAA TGCGCGCCCGCCG CACGCCATCT CAGCAGGCGCACG TCACCAACGTTAAAG pduC 2139697 - 2141361 + | propanediol utilization: dehydratase, large subunit TERM 2863 2142035 - 2142019 - g 83 -7.9 -4.59773 | opp_overlap 2142031, overlap 2142021 2142030 CGTGACGGGCAAAAA CCCGCAG GAA CTGCGCG TGGCGCTTTGATAAA pduD 2141372 - 2142046 + | propanediol utilization: dehydratase, medium subunit TERM 2864 2142031 - 2142041 + F 72 -8.2 -3.73224 | opp_overlap 2142021 2142019 2142030 AAACCCGCAGGAACT GCGC GTG GCGC TTTGATAAAGGATAA TERM 2865 2142172 - 2142114 - g 72 -11 -3.15663 | gap 4, overlap 2142116 ATTGAGCCGCATGAA CAGCCTGCAGGGCGATG-CGCCAGCCGCGG CTT CGGCGGCAGGCGGCA-CGTCCCGCA-GC-G CAAAGGTCAGCGACT TERM 2866 2142173 - 2142116 - g 100 -17 -3.14051 | gap 3, overlap 2142114 TGAGCCGCATGAACA GC-CTGCAGGGCGATG-CGCCAGCCGCGG CTT CGGCGGCAGGCGGCA-CGTCCCGCAGCGC AAAGGTCAGCGACTA TERM 2867 2142219 - 2142205 - g 70 -7.1 -4.15044 | CCGCTGGCGAACAAA CACCC GGAAT GGGTG AAAACCGCCACCAAT pduE 2142061 - 2142582 + | propanediol utilization: dehydratase, small subunit TERM 2868 2143299 - 2143287 - g 86 -7.7 -4.82667 | CGATGAGACGAAAAA CATCG TCC CGATG GCGCGCGCGCTGATT TERM 2869 2143354 - 2143343 - g 74 -7.2 -4.07568 | CCGTGGTGGTTAAAA CGCC ATCC GGCG ACGTCAAAGCGCGCG TERM 2870 2143930 - 2143886 - g 83 -12.3 -3.71917 | gap 1, opp_overlap 2143886, overlap 2143879 ACCCTAAAGGCGAAA TCATCGCCACTCACCTCGCC GGTGCA GGCGACATG-GTGACGATGA TTATTGCCCGCGAGC pduG 2142598 - 2144430 + | propanediol utilization: diol dehydratase reactivation pduH 2144420 - 2144770 + | propanediol utilization: diol dehydratase reactivation pduJ 2144789 - 2145064 + | propanediol utilization: polyhedral bodies TERM 2871 2145273 - 2145228 - g 74 -6.8 -4.26076 | gap 1, overlap 2145229 2145231 GGATGGTGATTAAAA TTACCGGTGATG-TGGCCTCC GTGCA GGCGGCCATCACCACCGATGC GCAATTTGCCGAACA TERM 2872 2145270 - 2145231 - g 81 -12.9 -3.13504 | gap 1, overlap 2145229 2145228 TGGTGATTAAAATTA CCGGTGATG-TGGCCTCC GTGCA GGCGGCCATCACCACCGA TGCGCAATTTGCCGA pduK 2145068 - 2145550 + | propanediol utilization: polyhedral bodies TERM 2873 2145716 - 2145703 - g 95 -3.1 -5.82316 | gap 1, overlap 2145704 2145705 ATCAGCGAAAAAAAA GCGCTG CTG CAGC-C GGGACAATACGCCGC pduL 2145550 - 2146182 + | hypothetical protein pduM 2146179 - 2146670 + | hypothetical protein pduN 2146674 - 2146949 + | propanediol utilization: polyhedral bodies pduO 2146959 - 2147969 + | hypothetical protein TERM 2874 2148046 - 2148021 - g 73 -10.3 -3.40867 | overlap 2148024 2148037 TTAGCGAGCAATTAA CCACGCCGGCG CAAA CGCCGGCCCAG CCTCAGGGCAAAGGG pduP 2147966 - 2149360 + | propanediol utilization: CoA-dependent propionaldehyde dehydrogenase pduQ 2149372 - 2150484 + | propanediol utilization: propanol dehydrogenase TERM 2875 2150540 - 2150556 + G 74 -11.5 -3.28712 | TGAAATTCGCGAGCG CGTCCGC GCA GCGGGCG TTGTCGGCGCGGGCG pduS 2150481 - 2151836 + | propanediol utilization: polyhedral bodies SC2063 2152298 - 2152092 - | hypothetical protein pduT 2151839 - 2152168 + | propanediol utilization: polyhedral bodies pduU 2152149 - 2152292 + | propanediol utilization: polyhedral bodies pduV 2152297 - 2152749 + | propanediol utilization TERM 2876 2153008 - 2153021 + G 74 -2.3 -5.02074 | overlap 2152997 2152998 TGGGCCATCGTGTGG CGCAC GGCG GTGAG TTTTTTAAAGACTCG TERM 2877 2153330 - 2153312 - g 74 -6.6 -4.36914 | CGTTCTGGCAGAAAA GCTGGGCG TAC CACTCAGC GCATTACGGGTGATT pduW 2152734 - 2153948 + | propionate kinase pduX 2154006 - 2154908 + | hypothetical protein TERM 2878 2154934 - 2154900 - T 79 -10.7 -3.53563 | ACAGGCGGGGTCAAA CTGCAGTGAGAGCCT GATAT ACGCTCCCACTGCCG TAGCGCATTATTCGG yeeX 2155277 - 2154942 - | hypothetical protein yeeA 2156580 - 2155522 - | hypothetical protein TERM 2879 2156210 - 2156232 + g 76 -2.8 -5.08824 | gap 1, overlap 2156210 ACGGCGAGCGTTATG CC-TATCAG TAGCGC CTGATACGG TTTTTTCCCTAAGGC TERM 2880 2156647 - 2156675 + r 76 -8.2 -4.07568 | gap 1, overlap 2156648 CAAAAATAGCGCACT G-GCGGACGGA ACACATTA TCCGTCCGCTC TTTTCAGACAGGAAA TERM 2881 2156648 - 2156673 + r 86 -11.9 -3.63744 | overlap 2156647 AAAAATAGCGCACTG GCGGACGGA ACACATTA TCCGTCCGC TCTTTTCAGACAGGA sbmC 2157166 - 2156699 - | DNA gyrase inhibitor TERM 2882 2156842 - 2156831 - G 84 -5.8 -5.06451 | GAGGACGTCAAAAAA CCGT TCCC ACGG CTTCGCAAAGTCACG dacD 2158489 - 2157317 - | D-alanyl-D-alanine carboxypeptidase TERM 2883 2158426 - 2158407 - G 86 -10 -4.25104 | GGTTGGGGAGCAAAA CTTACGGC ATCG GCCGCAAG CGCAGGAGAAAGGTG TERM 2884 2158592 - 2158555 - R 74 -8.5 -4.0056 | opp_overlap 2158561 2158566, overlap 2158556 2158566 ACAAACATGGATAAA TTGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCTG ACATTATTTTATGGA TERM 2885 2158591 - 2158556 - R 78 -12 -2.99251 | opp_overlap 2158561 2158566, overlap 2158555 2158566 CAAACATGGATAAAT TGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCT GACATTATTTTATGG SC2072 2159377 - 2158613 - | hydrogen sulfide production: membrane anchoring protein phsB 2159952 - 2159374 - | hydrogen sulfide production: iron- sulfur subunit; electron transfer phsA 2162243 - 2159967 - | hydrogen sulfide production: membrane anchoring protein TERM 2886 2162186 - 2162176 - G 77 -8.2 -4.07568 | GCCCCGGGCGGAAAA GCGC CCA GCGC GCAGGCAGAGCAGCC SC2075 2162633 - 2162487 - | putative cytoplasmic protein TERM 2887 2163071 - 2163056 - H 79 -2.6 -5.31275 | overlap 2163064 CGTTACCACAAAAAA TAAAAG ACTT CTTTCA GCCGAAAGATAAAAA TERM 2888 2163193 - 2163179 - H 80 -7.2 -4.59511 | AAGATGTCTCAAAAA TGAATG CAG CATTCA TGCGTAAGCATATTG sopA 2163504 - 2165207 + | hypothetical protein TERM 2889 2165253 - 2165234 - f 88 -12.2 -3.56704 | opp_overlap 2165234, overlap 2165230 CCCGCATGAAATTAA GGGACACA GCGT TGTGTCCC TCTGTACATAGACCC TERM 2890 2165234 - 2165253 + F 79 -12.2 -2.91264 | opp_overlap 2165234 2165230 CCCGCATGAAATTAA GGGACACA GCGT TGTGTCCC TCTGTACATAGACCC TERM 2891 2166864 - 2166890 + G 87 -8.6 -4.57837 | overlap 2166866 CAGCGCTGGCTGGAG CATCGCCGTCAG GTG CTGACGCCGGAG TTTTTACAACAGTAT sbcB 2165574 - 2167004 + | exonuclease I TERM 2892 2167094 - 2167112 + T 100 -16 -4.4261 | opp_overlap 2167094 ATGACAAACAAAAAA CCGGAGGC AGT GCCTCCGG TTTTACTATTGCCGA TERM 2893 2167112 - 2167094 - T 100 -16 -5.73978 | opp_overlap 2167094 ATGACAAACAAAAAA CCGGAGGC AGT GCCTCCGG TTTTACTATTGCCGA yeeF 2168504 - 2167140 - | amino acid APC transporter TERM 2894 2168682 - 2168655 - R 100 -9.2 -5.63103 | opp_overlap 2168658 TTTGAAGCAAAAAAA TAACCGACGCGT ATTA AAACGTCGGTTA GTGTCATTTTTTGCA yeeY 2169698 - 2168784 - | LysR family transcriptional regulator TERM 2895 2169639 - 2169650 + g 77 -4.4 -4.83615 | overlap 2169634 TGCCGACGCCGCCGC GAAG CTGC CTTC TTTTTCTAACGCATC yeeZ 2170568 - 2169744 - | hypothetical protein TERM 2896 2170457 - 2170474 + g 81 -8.4 -4.26076 | TCATACGGGCCGCTT CCACCC CGTCAA GGGTGG TTTTGCTGCCGGTAA TERM 2897 2170837 - 2170863 + H 100 -22.4 -5.75342 | opp_overlap 2170837 TGAACGCATGAGAAA GCCCCCGGAAGA TCA TCTTCCGGGGGC TTTTTTTTGGCGCGC TERM 2898 2170863 - 2170837 - H 100 -22.4 -3.99405 | opp_overlap 2170837 TGAACGCATGAGAAA GCCCCCGGAAGA TCA TCTTCCGGGGGC TTTTTTTTGGCGCGC TERM 2899 2171774 - 2171764 - g 71 -8.2 -3.89617 | opp_overlap 2171766 ATGGAGAAACTGAAA GCGC TTG GCGC CAGCTCGATTCTGGT hisG 2170918 - 2171817 + | ATP phosphoribosyltransferase TERM 2900 2172130 - 2172101 - g 93 -11.5 -4.44974 | gap 1 CTAAATTTGATAAAA CAGAAGTGACAGCG CTA CGC-GTCACCCCTG AAGAGATCGCCGCCG hisD 2171920 - 2173224 + | histidinol dehydrogenase SC2083 2173221 - 2174300 + | histidinol-phosphate aminotransferase TERM 2901 2175089 - 2175113 + G 76 -10.7 -3.62096 | opp_overlap 2175089, overlap 2175091 CTACCGATGGATGAA TGTCTGGCGCG CTG CGCGCTGGATA TTTCCGGTCGTCCGC TERM 2902 2175091 - 2175111 + G 75 -11.1 -3.39018 | opp_overlap 2175089, overlap 2175089 ACCGATGGATGAATG TCTGGCGCG CTG CGCGCTGGA TATTTCCGGTCGTCC TERM 2903 2175275 - 2175259 - g 70 -3 -4.82855 | gap 1 GACTAAAGGTAAAAA CGATCAC CACC GTG-TCG AAAGTTTGTTTAAAG hisB 2174297 - 2175364 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 2175361 - 2175954 + | imidazole glycerol phosphate synthase subunit HisH TERM 2904 2176415 - 2176397 - g 84 -8.8 -4.25104 | CGGCTGGCAGGAAAA TTCCGGCG TCT CGCTGGAA CAACTGGTGGAGACC hisA 2175954 - 2176691 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 2176673 - 2177449 + | imidazole glycerol phosphate synthase subunit HisF TERM 2905 2177510 - 2177486 - g 84 -6.3 -5.03314 | overlap 2177487 TGGACTGGGAAAAAA CCGATGGCCTG ATG CCAGCCATCGT GCAACATGCGGTATC TERM 2906 2177509 - 2177487 - g 71 -9.8 -3.61506 | overlap 2177486 GGACTGGGAAAAAAC CGATGGCCTG ATG CCAGCCATCG TGCAACATGCGGTAT hisI 2177443 - 2178054 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 2907 2178090 - 2178056 - T 87 -14.4 -2.83073 | opp_overlap 2178066, overlap 2178066 AGCGCCATCAATAAG CGTAAAAAAACCGGGC AAT GCCCGGTTTTTTAATG AGAAATTTTACCTTT TERM 2908 2178066 - 2178080 + T 100 -12.8 -5.14563 | opp_overlap 2178066 2178056 ATAAGCGTAAAAAAA CCGGGC AAT GCCCGG TTTTTTAATGAGAAA TERM 2909 2178080 - 2178066 - T 100 -12.8 -5.48303 | opp_overlap 2178066, overlap 2178056 ATAAGCGTAAAAAAA CCGGGC AAT GCCCGG TTTTTTAATGAGAAA wzzB 2179172 - 2178135 - | regulator of length of O-antigen component of lipopolysaccharide chains TERM 2910 2178519 - 2178539 + g 80 -4.7 -5.1356 | GCGCAACGCTTCTTC GATTTGCTT AAT ACGCAGATC TTTTTGTTCCTGCGC TERM 2911 2179252 - 2179233 - R 70 -10 -3.10512 | opp_overlap 2179233, overlap 2179230 ATGGTCAATAAATCA TCGGGACT CATC AGCCCCGA TTGCCTTATTAATCA udg 2180427 - 2179261 - | UDP-glucose/GDP-mannose dehydrogenase TERM 2912 2180644 - 2180626 - R 100 -11.7 -6.06529 | opp_overlap 2180621 TAGAGATAAAAAAAA GCCCGGT ATTAA ACCGGGC TTAAACATTTTTGCA gnd 2182070 - 2180664 - | 6-phosphogluconate dehydrogenase SC2092 2183733 - 2182207 - | putative 12 transmembrane segment protein TERM 2913 2183058 - 2183069 + g 70 -3 -4.68456 | TTTTTATTTTTAATT CATT TTTT AATG TTGTTTTTTCATCAT TERM 2914 2183868 - 2183843 - R 83 -9.3 -4.30416 | opp_overlap 2183843 2183847 2183850, overlap 2183847 ACCAGGAAGGTAAAA TAAATAATCAT ATCA ATGATTATTTA TACTGTCCGAAAAGA TERM 2915 2183864 - 2183847 - R 74 -5.7 -4.72188 | opp_overlap 2183843 2183847 2183850, overlap 2183843 GGAAGGTAAAATAAA TAATCAT ATCA ATGATTA TTTATACTGTCCGAA TERM 2916 2183991 - 2184015 + r 70 -2 -4.91712 | opp_overlap 2183994, overlap 2183992 2183994 AGAATATCCGAAAAG TTAGCCCTCC ATAAA GAAGGGCTGC TTTTTATGAATTGAG manB 2185389 - 2184019 - | phosphomannomutase in colanic acid gene cluster manC 2186822 - 2185404 - | phosphomannomutase in colanic acid gene cluster SC2095 2188051 - 2186819 - | hypothetical protein TERM 2917 2187435 - 2187454 + gr 81 -3.6 -5.252 | ACCAAAATGTTATCA TTCCTATT CCCA AAAAGGAA TTTTTTGTCAACCTC SC2096 2189012 - 2188005 - | hypothetical protein SC2097 2189997 - 2188996 - | hypothetical protein SC2098 2191076 - 2189997 - | O-antigen polymerase TERM 2918 2191418 - 2191367 - R 100 -10.1 -4.75518 | opp_overlap 2191367 TATACAAAACTAAAA CGGCAGTCAACACTCGTTTCAGC CAACTT GCCGCTTCGAATGTTCACTGCCG TTATTATGTTTATCA galF 2192483 - 2191461 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalF wcaM 2193935 - 2192532 - | putative colanic acid biosynthesis protein wcaL 2195166 - 2193946 - | putative glycosyl transferase in colanic acid gene cluster TERM 2919 2194554 - 2194538 - G 71 -4.3 -4.64598 | overlap 2194539 GAACGATGGGAAAAA CGCGTCA TGT CGACGCC CATGCGCGAAACAGC wcaK 2196443 - 2195163 - | putative pyruvyl transferase wzxC 2197943 - 2196465 - | colanic acid exporter wcaJ 2199439 - 2198045 - | putative UDP-glucose lipid carrier transferase TERM 2920 2198105 - 2198092 - G 72 -2.4 -4.86033 | overlap 2198080 AAATCGTCAGAAAAA CGAT TTTGAT ATCG AACCAAATACTCCAT cpsG 2200863 - 2199493 - | phosphomannomutase in colanic acid gene cluster manC 2202416 - 2200974 - | mannose-1-phosphate in colanic acid gene cluster TERM 2921 2202170 - 2202198 + g 76 -11.7 -3.01924 | opp_overlap 2202168 GCTCAAGAATAATGT TCTCCGTCAGCTT ATT GAGCTGGCGGAGC TGTTCGGCAACGATA TERM 2922 2202244 - 2202217 - G 73 -5.5 -4.5442 | opp_overlap 2202203 TCGGCAACGATAAAA CGGTGCTGTTC GTTACA GATCACCACCG GGCTTTCGCACTCCA wcaI 2203636 - 2202413 - | putative glycosyl transferase wcaI 2204106 - 2203633 - | putative glycosyl transferase in colanic acid biosynthesis wcaG 2205074 - 2204109 - | GDP fucose synthetase TERM 2923 2204530 - 2204515 - G 72 -11.8 -2.83403 | overlap 2204514 GCGGCCTCATGAAAG CGGCGC AGCA GCGCCG GGATCACATGTGAAT TERM 2924 2204773 - 2204806 + g 74 -11.1 -3.24235 | overlap 2204771 CCGAGAAACAGCAGT TTGTTCACGTTGTGC AGGT GCGCGGCGTGAATAA TGTTGCTCTCTATCA gmd 2206198 - 2205077 - | GDP-D-mannose dehydratase in colanic acid gene cluster TERM 2925 2205157 - 2205189 + g 70 -9.1 -3.71649 | overlap 2205158 2205160 2205166 CCTCCAGATCGTTCG CCACCATCTCGGAGA CCA TCTCCGACAGGGTGA TTTCCGGTTTCCAGC TERM 2926 2205158 - 2205188 + g 76 -12.6 -2.82668 | overlap 2205157 2205160 2205166 CTCCAGATCGTTCGC CACCATCTCGGAGA CCA TCTCCGACAGGGTG ATTTCCGGTTTCCAG wcaF 2206776 - 2206222 - | putative colanic acid biosynthesis acetyltransferase WcaF wcaE 2207538 - 2206792 - | putative glycosyl transferase wcaD 2208765 - 2207551 - | putative colanic acid biosynthesis protein TERM 2927 2207648 - 2207638 - GR 76 -3.2 -5.055 | TGAACCGGTAAAAAA CAGT GAC ACCG GCGTAAAAAGATAGA TERM 2928 2208262 - 2208249 - GR 71 -4.5 -4.64861 | CCGGTTCAAAATAAA GCGCA GTGG TACGC TTACCGCCAAATTTT wcaC 2209957 - 2208740 - | putative glycosyl transferase TERM 2929 2208842 - 2208818 - G 71 -8.5 -3.84825 | GCTACGCATACGAAA GGCGTCCAGCG TTG CGCCAAACACC GCCTGAGCAATCTCT TERM 2930 2209396 - 2209379 - G 73 -6.3 -4.41348 | gap 1 GCTCGGCGAAATAAA CTGGCAGC CCA GCTGC-AG CATGTCCCGAAAGCG TERM 2931 2209570 - 2209585 + g 76 -5.4 -4.70879 | gap 1 CGTGCAGCGTCCAGA CCAG-CG TGA CGTCTGG TTTTTGCGCTTTGAC wcaB 2210442 - 2209954 - | putative colanic acid biosynthesis acetyltransferase WcaB TERM 2932 2210192 - 2210177 - G 80 -9 -4.19238 | opp_overlap 2210151 2210179 TGGCGAATGGTAAAA TCGTCG CCGG CGACGA CATGTTTGTTGATCA wcaA 2211287 - 2210445 - | glycosyl transferase TERM 2933 2211347 - 2211366 + r 76 -4.8 -4.88687 | overlap 2211349 GGCCCACAGTCACAG GCCGCGCC ATCC GGCACGCC TTATTTTTTATTTGG wzc 2213533 - 2211374 - | tyrosine kinase wzb 2213952 - 2213530 - | tyrosine phosphatase wza 2215124 - 2213985 - | putative polysaccharide export protein, outer membrane TERM 2934 2214243 - 2214233 - G 74 -2.4 -4.99861 | GACGAATCACAAAAA TGCC GCT GGCG TTGGAGGTGGTCAGA SC2120 2215198 - 2215443 + | hypothetical protein yegH 2215799 - 2217379 + | putative inner membrane protein TERM 2935 2217410 - 2217452 + T 86 -12 -3.53224 | gap 2, overlap 2217411 CCTGGCCTGCTTACC AGGCAG-GCCGGA-GGCGCG TTAGC CTCGCCATCCGGCTCTGCCC TTTGGCCAAAAACTA TERM 2936 2217411 - 2217451 + T 90 -15.5 -2.71791 | gap 2, overlap 2217410 CTGGCCTGCTTACCA GGCAG-GCCGGA-GGCGCG TTAGC CTCGCCATCCGGCTCTGCC CTTTGGCCAAAAACT asmA 2219321 - 2217465 - | putative assembly protein TERM 2937 2217951 - 2217968 + g 73 -5.5 -4.55128 | TTCGAGGCGCGTATT GCTCATG TCAA CATGCGC TTTTCCTTTCCAGCT TERM 2938 2218875 - 2218850 - G 80 -8.9 -4.09685 | TTTCATGCTGGAAAA CCAGCACGCTG TCGG CAACGCGCAGG CTACGAATATCAAAC dcd 2219941 - 2219360 - | deoxycytidine triphosphate deaminase udk 2220673 - 2220032 - | uridine kinase SC2125 2220919 - 2220749 - | hypothetical protein TERM 2939 2221688 - 2221708 + G 95 -5.4 -5.31158 | gap 1 ATGTGGAGTGCGGTG CGCCTGCCG CGAA TGG-AGGCG TTTTTAATTTTTTTA yegE 2221004 - 2223994 + | PAS/PAC domain/diguanylate cyclase/phosphodiesterase domain-containing protein alkA 2224831 - 2223962 - | 3-methyl-adenine DNA glycosylase II TERM 2940 2225815 - 2225793 - g 74 -4.7 -4.81249 | GGCGAAACCGAAAAA GGCATCGCC CTGCC GGTGCTGCC GTGGTGGAACGCCGT yegD 2224965 - 2226317 + | putative chaperone TERM 2941 2226494 - 2226513 + F 86 -11.4 -3.71649 | overlap 2226504 CCTTTCCTTATTTTG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG yegM 2226805 - 2227998 + | multidrug efflux system subunit MdtA TERM 2942 2229110 - 2229158 + G 72 -2.2 -4.92239 | overlap 2229112 2229113 2229115 2229125 CGCCACAATTATTCC CGGCGTCGCCGTACCGCTGTCG CTTAT CGGCACCTTTGCGGTGATGGTG TTTTTGGATTTTTCC TERM 2943 2229294 - 2229282 - g 84 -6.2 -5.1286 | opp_overlap 2229282 GAAAAAGGAGAAAAA CCGC TGGCG GCGG CGCTCAAAGGCGCGG TERM 2944 2230535 - 2230519 - g 91 -7.9 -5.1287 | TCGATACGGAAAAAA CGCTCGC CCT GCCAGCG GATATTACAACGCAG TERM 2945 2230573 - 2230602 + G 76 -9.9 -3.78934 | overlap 2230574 GCAGTACGCTCGCCT TCCAGGCGGCGCT GGGC AGCACCGTCTGGC TTATTGTCGCCGCCG TERM 2946 2230574 - 2230601 + G 81 -13.4 -2.87146 | overlap 2230573 CAGTACGCTCGCCTT CCAGGCGGCGCT GGGC AGCACCGTCTGG CTTATTGTCGCCGCC TERM 2947 2230705 - 2230747 + G 83 -12.7 -3.23715 | gap 1, overlap 2230703 TGCCTACGGCGGGCG TCG-GCGCGCTGCTGGCGCT GATC ATCGCCGGTAGCGAGCTCGA TATTATCGCCATTAT yegN 2227998 - 2231120 + | multidrug efflux system subunit MdtB TERM 2948 2233896 - 2233880 - g 76 -3 -5.07486 | gap 1, opp_overlap 2233880 2233882, overlap 2233862 2233882 CATTGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTTGAAG yegO 2231121 - 2234201 + | multidrug efflux system subunit MdtC TERM 2949 2235021 - 2235039 + F 95 -12.4 -3.86015 | overlap 2235011 TTTTGCCGGGCGTAT CGGCAGCG GTA TGCTGCCG TTTATGACGCCGGTC TERM 2950 2235519 - 2235539 + F 74 -5.5 -4.57569 | TATGTATGGCGGTTA TTATCGC GCTACCG GCGATAA TTTTTGCCCGCGTGC TERM 2951 2236130 - 2236152 + G 72 -4 -4.7254 | overlap 2236121 2236131 TCGTGGCGTTATCAA CGTTGCTGGC CGC GCTGGCGACA TTTTTGCTGGCGCGT baeS 2235607 - 2237010 + | signal transduction histidine-protein kinase BaeS TERM 2952 2237639 - 2237627 - g 76 -5.5 -4.81551 | CAGCCATATTAAAAA CCTGC GCC GCAAG CTGGAATCGCTGGAT baeR 2237007 - 2237729 + | DNA-binding transcriptional regulator BaeR TERM 2953 2238115 - 2238128 + G 82 -5.3 -4.98857 | GAAAATATCCAGCGC TGGTT AAGC AACCA TTTTTATCGTTGGAT TERM 2954 2238431 - 2238419 - g 79 -3.3 -5.1861 | overlap 2238420 CGGAGCATCAAAAAA TGCAG CGC CTGCG TGAACAAGGTTGGTA SC2134 2237998 - 2239200 + | putative cytoplasmic protein TERM 2955 2239282 - 2239262 - g 100 -4.6 -6.02345 | overlap 2239266 CAACTACAAAAAAAA CAAACCGC TGATT GCGGCCCG TATCGCCGAGGAGAA TERM 2956 2239278 - 2239266 - g 95 -6.2 -5.39407 | overlap 2239262 TACAAAAAAAACAAA CCGC TGATT GCGG CCCGTATCGCCGAGG TERM 2957 2239521 - 2239487 - g 77 -8.4 -4.18018 | overlap 2239497 GGGCTTGAGCGAAAA CCTCAACGGAGCGGCG TTA CGCCACAAGGTCGAGG ATATCTTACGCCGCT SC2135 2239200 - 2239916 + | putative inner membrane protein TERM 2958 2239999 - 2239983 - g 72 -2.1 -4.98255 | overlap 2239984 2239995 GTGCAACCACAAAAA TCCCCTC AAT GACGGGC AACGCGAATGGCATA SC2136 2239927 - 2242038 + | putative inner membrane protein SC2137 2242043 - 2242762 + | hypothetical protein SC2138 2243636 - 2242893 - | hypothetical protein insA 2243874 - 2243740 - | hypothetical protein SC2140 2244460 - 2244086 - | hypothetical protein SC2141 2245155 - 2244778 - | hypothetical protein yibG 2245956 - 2245567 - | hypothetical protein SC2143 2247252 - 2247494 + | hypothetical protein yibG 2248246 - 2247881 - | hypothetical protein yibJ 2249085 - 2248348 - | hypothetical protein SC2146 2249646 - 2249113 - | hypothetical protein TERM 2959 2249299 - 2249287 - G 78 -2.6 -5.22768 | AGAATAAAAAACAAA CGCC TCATC GGCA CCATATGTTTCTATA SC2147 2250691 - 2250248 - | hypothetical protein TERM 2960 2250680 - 2250670 - G 74 -2.6 -5.02439 | opp_overlap 2250670 ATAGAATCACAAAAA TAAT CAC ATTA TTCGCTTTCATATTA TERM 2961 2251179 - 2251165 - R 79 -2.9 -5.28561 | AACATATAACAAAAA TATGT TCACG ACATA TCCAATTAATATTTC SC2148 2251657 - 2251238 - | hypothetical protein TERM 2962 2251829 - 2251814 - R 80 -6.2 -4.77567 | opp_overlap 2251814, overlap 2251828 ATTTTCATAATAAAA TCTACT AATA AGTAGA TTAAATGGATTCCAT SC2149 2252255 - 2252091 - | hypothetical protein TERM 2963 2252166 - 2252177 + g 84 -5.8 -5.0917 | AATGCATGTTGCCGA GGTG ATTT CACC TTTATTTTTTAGTGA SC2150 2252930 - 2252313 - | hypothetical protein TERM 2964 2253735 - 2253718 - g 71 -6.3 -4.34008 | overlap 2253734 CAGGAAGGAAAAGAA GACGTTG TCGG CAACATC GTGCATAAGCATGAA yegQ 2253094 - 2254455 + | putative protease TERM 2965 2254589 - 2254620 + T 100 -9.5 -5.13473 | overlap 2254592 CCAGGAACCACCTCC TTGGCCTGCGTAA TCTCCC TTACGCAGGCTTA TTTTTTGCGTATAAT TERM 2966 2254592 - 2254617 + T 100 -13.4 -4.65666 | overlap 2254589 GGAACCACCTCCTTG GCCTGCGTAA TCTCCC TTACGCAGGC TTATTTTTTGCGTAT cesT 2255512 - 2255096 - | putative cytoplasmic protein SC2153 2255969 - 2255634 - | putative inner membrane protein SC2154 2256447 - 2256331 - | hypothetical protein TERM 2967 2257013 - 2256999 - g 74 -8.5 -3.99805 | opp_overlap 2256998 CCGGAAAAACTTAAA GCCGC ATTGG GCGGC GTCTCCTATCTTATC yegS 2256531 - 2257430 + | lipid kinase TERM 2968 2257446 - 2257467 + T 100 -11.6 -4.78572 | TAACACCTGTCGCTG GCCGGATG CGCTCA CATCCGGC TTTTCTTCGTTGAAC fbaB 2258535 - 2257483 - | fructose-bisphosphate aldolase TERM 2969 2258895 - 2258883 - g 83 -6.2 -4.87803 | TATGGCTAAATAAAA GCGG GTTTT CCGC CGGTGAAATAGGCTG TERM 2970 2258955 - 2258976 + G 90 -5.1 -5.24129 | overlap 2258947 2258956 TCCTGTCGCCGATTC TGGTCGG CTCCGTTA CCGACCG TTTTTTCTCGGCGCA TERM 2971 2259409 - 2259425 + G 77 -3.7 -4.99312 | GCTGGTCCTGCTGCG CGATAAA AAC TTTCTCG TTTTCTTCTTCTGTT TERM 2972 2259639 - 2259649 + G 81 -2.4 -5.4251 | overlap 2259630 TTATTACCGCCGCGA TCCG CTA CGGC TTTTTTGTCTATGGC yegT 2258789 - 2260060 + | MFS family transporter yegU 2260057 - 2261061 + | putative glycohydrolase yegV 2261058 - 2262023 + | putative sugar kinase yegW 2262743 - 2261997 - | GntR family transcriptional regulator thiD 2263579 - 2262779 - | phosphomethylpyrimidine kinase TERM 2973 2263234 - 2263245 + g 74 -7.2 -4.08216 | opp_overlap 2263234, overlap 2263232 CAGAGGGCGAGAGCA GCGG ATCG CCGC TTTTCGCCAGCATCA thiM 2264363 - 2263566 - | hydroxyethylthiazole kinase yohN 2264773 - 2265087 + | hypothetical protein TERM 2974 2265113 - 2265093 - T 100 -8.2 -5.64274 | opp_overlap 2265109, overlap 2265094 TCATCGATAAAAAAA GCCCCCTC ATCCA GAGGGGGA AATACAGCCCCATGT TERM 2975 2265112 - 2265094 - T 95 -11.7 -3.9748 | opp_overlap 2265109, overlap 2265093 CATCGATAAAAAAAG CCCCCTC ATCCA GAGGGGG AAATACAGCCCCATG TERM 2976 2265309 - 2265262 - T 80 -9.9 -3.9009 | opp_overlap 2265269 2265270, overlap 2265265 AATTTATTGCAGAAA GATTGTCATCCCGGTCACTTA TTATTG TAAGTGACCGGGAGTTCATTC ACCTATCGCGCCATA TERM 2977 2265306 - 2265265 - T 71 -10.2 -2.71918 | opp_overlap 2265269 2265270, overlap 2265262 TTATTGCAGAAAGAT TGTCATCCCGGTCACTTA TTATTG TAAGTGACCGGGAGTTCA TTCACCTATCGCGCC TERM 2978 2265269 - 2265302 + T 93 -14.7 -3.36785 | opp_overlap 2265265 2265262, overlap 2265270 TGCAGAAAGATTGTC ATCCCGGTCACTTAT TATT GTAAGTGACCGGGAG TTCATTCACCTATCG TERM 2979 2265270 - 2265301 + T 100 -18.2 -2.6175 | opp_overlap 2265265 2265262, overlap 2265269 GCAGAAAGATTGTCA TCCCGGTCACTTAT TATT GTAAGTGACCGGGA GTTCATTCACCTATC stcD 2266356 - 2265349 - | hypothetical protein TERM 2980 2266354 - 2266344 - G 75 -4 -4.93898 | opp_overlap 2266344 ACATCACGATAAAAA GAAA GAG TTTC ATTTCACCACCTCAC stcC 2268861 - 2266372 - | paral putative outer membrane protein TERM 2981 2267453 - 2267467 + g 76 -5 -4.72127 | overlap 2267454 TCGTATACATCATTC TTATCG CGA CGATAG TTATTTTTATTATTG TERM 2982 2268239 - 2268254 + g 74 -4.6 -4.70169 | TTGCTTTTCCACTCA CCGCTG CTGC CATCGG TTTTATTAAATGTGG stcB 2269627 - 2268875 - | putative periplasmic chaperone protein TERM 2983 2269604 - 2269585 - G 100 -12.8 -5.24129 | opp_overlap 2269585 CTTGCTTATAAAAAA CCGGCGAC GAAC GCCGCCGG TTGAATAAATTAGTC stcA 2270144 - 2269614 - | paral putative fimbrial-like protein TERM 2984 2270404 - 2270375 - R 100 -18.1 -5.82036 | ACAACAAATAAAAAA GCCCATATCATTG ATAT CAATGATATGGGC CTGCGGAATTAATAA yehE 2270704 - 2270423 - | hypothetical protein TERM 2985 2270911 - 2270956 + r 83 -10.7 -3.82946 | opp_overlap 2270914 2270916 2270950, overlap 2270914 2270916 2270918 GGGCTATTATTTTAT TAATACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTCATA TTCTCTTTGGAATAC TERM 2986 2270953 - 2270914 - R 90 -14.6 -3.17212 | opp_overlap 2270911 2270914 2270916 2270918, overlap 2270916 2270950 CTATTATTTTATTAA TACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTC ATATTCTCTTTGGAA TERM 2987 2270914 - 2270954 + r 79 -10.8 -3.49634 | gap 1, opp_overlap 2270914 2270916 2270950, overlap 2270911 2270916 2270918 CTATTATTTTATTAA T-ACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTCA TATTCTCTTTGGAAT TERM 2988 2270951 - 2270916 - R 100 -17.2 -3.1478 | opp_overlap 2270914 2270911 2270916 2270918, overlap 2270914 2270950 ATTATTTTATTAATA CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG TCATATTCTCTTTGG TERM 2989 2270916 - 2270951 + r 93 -15 -2.88134 | opp_overlap 2270916 2270914 2270950, overlap 2270914 2270911 2270918 ATTATTTTATTAATA CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG TCATATTCTCTTTGG TERM 2990 2270918 - 2270949 + r 78 -11.8 -2.97857 | opp_overlap 2270916 2270914, overlap 2270916 2270914 2270911 TATTTTATTAATACA TTCACTGCATCAAT ATAT ATTAATGCAGTGAA TGTCATATTCTCTTT mrp 2272091 - 2270982 - | putative ATPase TERM 2991 2272787 - 2272825 + G 81 -2.2 -5.28942 | GAACCGAAATCCGTG GTGTCCGGCGCGACGC CGGTAAT GCGTGACTCCGAGCAC TTTTTCTTTGACCTG TERM 2992 2274172 - 2274184 + G 70 -9.1 -3.63627 | CGCCAACCTCGCGCC GCGCA AAA TGCGC TTTGGCGTCTCCGAG metG 2272256 - 2274289 + | methionyl-tRNA synthetase TERM 2993 2274297 - 2274314 + F 100 -12.7 -5.03145 | opp_overlap 2274290 2274297 TGAAATAAGCAACAA GCCGGAG CATG CTCCGGC TTTTTTAACCGCTTA TERM 2994 2274314 - 2274297 - f 95 -12.7 -3.93237 | opp_overlap 2274297, overlap 2274290 TGAAATAAGCAACAA GCCGGAG CATG CTCCGGC TTTTTTAACCGCTTA yehR 2274530 - 2274988 + | putative lipoprotein TERM 2995 2275032 - 2275051 + F 100 -11.4 -5.01553 | overlap 2275026 GGTAAAGTCGCTCAG GGCGCTGC TTCG GCAGCGTC TTTTCTTTATGAATT TERM 2996 2275090 - 2275076 - f 76 -4.2 -5.055 | overlap 2275078 TGAATTCCGAAAAAA GACAGC CTC GCTGTA AGTCCCCTCGCCAAA TERM 2997 2275088 - 2275078 - f 71 -6.8 -4.15235 | overlap 2275076 AATTCCGAAAAAAGA CAGC CTC GCTG TAAGTCCCCTCGCCA SC2172 2275458 - 2275688 + | hypothetical protein yehS 2276269 - 2275745 - | hypothetical protein yehT 2276978 - 2276259 - | putative two-component response-regulatory protein YehT yehU 2278615 - 2276975 - | paral putative sensor/kinase in regulatory system TERM 2998 2279483 - 2279500 + G 71 -9.9 -3.53012 | GCGCATTCGCTTAGC CAGTTCC GCCC GGAACTG TTTGACGGCAAGACG TERM 2999 2279549 - 2279539 - g 74 -6.8 -4.37092 | overlap 2279540 2279542 2279544 ATGGTGCGGAGAAAA CCAG ACG CTGG CGCAGCAGCAGCAAC yehV 2278883 - 2279614 + | MerR family transcriptional regulator SC2177 2279674 - 2279781 + | hypothetical protein yehW 2280493 - 2279762 - | putative ABC-type proline/glycine betaine transport systems, permease component yehX 2281424 - 2280477 - | putative ABC-type proline/glycine betaine transport system, ATPase component TERM 3000 2280817 - 2280841 + g 95 -17.9 -2.80816 | opp_overlap 2280814 ATCAGCACCAGATGG TCGGCGAGGCG TAG CGCCTCGTCGA TGTCGTGCGTCACCA yehY 2282586 - 2281417 - | putative ABC-type proline/glycine betaine transport systems, permease component TERM 3001 2282363 - 2282334 - G 81 -3.6 -5.22006 | gap 2 GCATGACAATAAAAA GCGT-CTG-CGCCA TCAT CAGCGTCAGTACGC TACCGCGTTTACCGG yehZ 2283507 - 2282590 - | ABC transporter substrate-binding protein TERM 3002 2282857 - 2282879 + g 83 -9.9 -4.15044 | gap 1 GTCGGTGCCATACGC CATCGCGGCG TTAA CGCCG-GATG TTTGTTGCGCGGCGG TERM 3003 2283267 - 2283244 - G 76 -3 -5.03314 | opp_overlap 2283249 2283250, overlap 2283249 TTCATCTTTAAAAAA GAACGCCCCG TTAC CGGTGTATTC CGGATAGATATCCAG bglX 2285985 - 2283688 - | beta-D-glucoside glucohydrolase, periplasmic TERM 3004 2286374 - 2286396 + G 88 -11.2 -4.18164 | CAAGGGTTTCCGTTC CGGTCAGGGC GAC GCGCTGGCCG TTGTTTTCCCGGGTT TERM 3005 2287018 - 2287035 + G 71 -4.7 -4.66833 | overlap 2287019 TTGAATCTTCCGGCT GCGCCGG GAAA CTGGCGG TTTTTGCCGTTCGCC TERM 3006 2287492 - 2287504 + G 70 -6.9 -4.19678 | opp_overlap 2287492 2287491 ATGAATTTTTTAAAT CCGCT GAG GGCGG TTTCTTCACCTGTAC dld 2286252 - 2287982 + | D-lactate dehydrogenase pbpG 2288987 - 2288040 - | D-alanyl-D-alanine endopeptidase TERM 3007 2288083 - 2288099 + g 91 -6.5 -5.2197 | overlap 2288073 2288078 GCACTGGCGCTGGCT GCCGC CATTTGC GCGGC TTTTTGCTTTTTATA TERM 3008 2289106 - 2289129 + r 71 -6.8 -4.07687 | gap 1, overlap 2289123 2289124 CGCTACAGAAGAATC GTCAGCAAATG CTG CAT-TGCTGGC TTTTGCGCCAGCCCT yohC 2289692 - 2289153 - | hypothetical protein TERM 3009 2289663 - 2289675 + g 73 -6.3 -4.44277 | GTGCGTATAGTGATG CGAAA CGG TTTCG TTTTCGCTTTTGATC yohD 2289899 - 2290468 + | DedA family, membrane protein yohF 2291277 - 2290516 - | acetoin dehydrogenase yohG 2292779 - 2291343 - | multidrug resistance outer membrane protein MdtQ TERM 3010 2291829 - 2291817 - G 73 -6.2 -4.39426 | GATATCGGGATAAAA CGCG GCCTT CGCG GCGTCAATGCTGCTC TERM 3011 2292282 - 2292303 + g 87 -8.6 -4.58395 | TTTGACCGCCCCGAT CCGCGCAG TAACTT CAGCGCGG TTTTTCCCCCATAAA SC2189 2292988 - 2292830 - | hypothetical protein SC2190 2292970 - 2293167 + | hypothetical protein TERM 3012 2293183 - 2293219 + Tr 77 -10.8 -3.30771 | overlap 2293182 GATGATTTTCTGATT CCTGCGCCGGGCAG CGATAGTAT CTGCCCGGCACACG TTCTGGACGCTGTAG yohI 2294176 - 2293238 - | tRNA-dihydrouridine synthase C TERM 3013 2293922 - 2293937 + g 77 -8.2 -4.07568 | ATATGATCCCAACGC CGTCGC CCGC GCGGCG TTTTCCGCCAGCCAC TERM 3014 2294219 - 2294199 - R 100 -11.9 -5.58454 | opp_overlap 2294201 TCCACAGCAAAAAAA GAGGCGCTA TCA TAACGCCTC TCTGCGATGAGCAAA nhg 2295478 - 2294285 - | salicylate hydroxylase maaI 2296137 - 2295493 - | putative glutathione S-transferase fst 2296847 - 2296146 - | putative flutathione S-transferase gdo 2297900 - 2296863 - | putative 1,2-dioxygenase protein pcaK 2299270 - 2297912 - | putative sugar transporter gbpR 2299396 - 2300304 + | LysR family transcriptional regulator TERM 3015 2300492 - 2300511 + G 84 -5.7 -5.10461 | TTTTGTATTGATTTA TGCCTGT TTGTAC GCAGGCA TTTTTCTTGCATCAC yohJ 2300400 - 2300834 + | hypothetical protein TERM 3016 2300856 - 2300875 + G 75 -6.4 -4.56597 | ATATCTGGTGGTCGT TACCGCTG ACGC TGGCGGTA TTTTTCGCCGCCCGC TERM 3017 2300879 - 2300904 + G 86 -10.3 -4.14511 | ACGCTGGCGGTATTT TTCGCCGCCCG CAGA CTGGCGGCGCA TTTTAAAATGCCGTT yohK 2300831 - 2301526 + | hypothetical protein cdd 2301680 - 2302564 + | cytidine deaminase TERM 3018 2303332 - 2303342 + G 95 -8.2 -5.00884 | opp_overlap 2303332 CTCTATATTTTTAAA CGCG AAC CGCG TTTTTTAGGCCCGCT sanA 2302678 - 2303460 + | hypothetical protein yeiS 2303463 - 2303702 + | hypothetical protein TERM 3019 2304388 - 2304372 - g 76 -5 -4.75372 | overlap 2304374 ACCATTTACGAAAAA CAGCCG CAGCC CGGCGG ATGGCTGCGTCACGG TERM 3020 2304399 - 2304374 - g 71 -7.5 -3.99327 | overlap 2304372 CATTTACGAAAAACA GCCGCAGCC CGGCGGAT GGCTGCGTC ACGGCATCCCGGCAT yeiT 2303907 - 2305148 + | putative oxidoreductase TERM 3021 2305630 - 2305616 - g 71 -4.2 -4.58283 | opp_overlap 2305621 GAACTGGTTGAAAAA TACTGC CGC GCCGTA AAACGCGGTTCATCT yeiA 2305142 - 2306377 + | dihydropyrimidine dehydrogenase TERM 3022 2306380 - 2306357 - T 71 -3.9 -4.77925 | gap 2 AAAAAAGGCGAAAAA GAGC-AC-GCG TTAA CGCTGTAGCTC GCGGTATGAAGCCCG TERM 3023 2306419 - 2306391 - T 74 -10.2 -3.14211 | gap 1, opp_overlap 2306392 AGCTCGCGGTATGAA GCCCGGCGC-GCA GTTT CGCTGCGCCGGGT TATCTGATAAGCAAG TERM 3024 2306392 - 2306418 + T 90 -13 -3.54475 | gap 1, opp_overlap 2306391 GCTCGCGGTATGAAG CCCGGCGC-GC AGTTTC GCTGCGCCGGG TTATCTGATAAGCAA mglC 2307462 - 2306452 - | beta-methylgalactoside transporter inner membrane component TERM 3025 2307500 - 2307518 + r 79 -8.2 -4.25052 | opp_overlap 2307494 2307500 2307498, overlap 2307494 2307495 TGCAAAGAAGCAAGA CGCAAAAT TTC GTTTTGCG TTGTTGTTTTAGTAT mglB 2310129 - 2309131 - | galactose ABC transporter permease TERM 3026 2309232 - 2309248 + g 91 -10.1 -4.57569 | TGCCGTCAGCCGCGC CCTTGCC TTC GGCGAGG TTTTTCGCCAGATCG TERM 3027 2310599 - 2310582 - R 72 -6.3 -4.21989 | overlap 2310572 CACAATGTTAATAAA CTGTGAA TTTA CTCACAG ATTGAAAACGGTTAC galS 2311650 - 2310628 - | DNA-binding transcriptional regulator GalS yeiB 2312942 - 2311800 - | hypothetical protein TERM 3028 2312172 - 2312154 - G 90 -12.4 -3.9461 | CGCCTGCAATAAGAA GGCGCACC AGC GGTACGCC CAGTCCAGCCGCCAT folE 2313625 - 2312957 - | GTP cyclohydrolase I SC2210 2313808 - 2313680 - | hypothetical protein SC2211 2315192 - 2314803 - | putative transcriptional regulator sdhL 2316564 - 2315197 - | putative D-serine dehydratase serB 2316781 - 2317668 + | putative phosphoserine phosphatase uhpC 2317701 - 2319023 + | putative regulatory protein TERM 3029 2319064 - 2319024 - T 77 -10.3 -3.30124 | opp_overlap 2319028, overlap 2319026 2319027 CTGCATCGGTTATAA CATTCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGTCTC TGTCAGAAACGGTAA TERM 3030 2319062 - 2319026 - T 83 -12.9 -3.21924 | opp_overlap 2319028, overlap 2319024 2319027 GCATCGGTTATAACA TTCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGTC TCTGTCAGAAACGGT TERM 3031 2319061 - 2319027 - T 95 -16.4 -2.5294 | opp_overlap 2319028, overlap 2319026 2319024 CATCGGTTATAACAT TCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGT CTCTGTCAGAAACGG TERM 3032 2319028 - 2319060 + T 100 -19.2 -2.98823 | opp_overlap 2319027 2319026 2319024 ATCGGTTATAACATT CTGGCGACAGCGGC AAAAC GCGGCTGTCGCCAG TCTCTGTCAGAAACG cirA 2321058 - 2319067 - | colicin I receptor TERM 3033 2320237 - 2320249 + g 76 -5.5 -4.82901 | CAACGCATAGTTTTG CCGTT CCA GACGG TTTTTATCCAGCGAG TERM 3034 2321326 - 2321309 - R 100 -11.3 -6.07374 | AGAAAAAACAAAAAA CCCTCTC GAAT GAGAGGG TTAGAAGGGTCAGGT lysP 2322872 - 2321403 - | lysine transporter TERM 3035 2321838 - 2321828 - G 71 -8.2 -3.85698 | overlap 2321829 CGGTGGTGGCATAAA GCGC ATT GCGC GGTACGCCGCCGCGG TERM 3036 2322730 - 2322717 - G 74 -3.1 -4.92791 | gap 1, overlap 2322719 CAGAATATAAGAAAA CA-GCG CGC CGCCTG GCCCCGCCTGAGAAA TERM 3037 2323040 - 2323027 - R 71 -3.7 -4.80882 | opp_overlap 2323029, overlap 2323028 2323029 AGCGGATACTAAAAA TGGCG ATGC CGCCC GGGCAGCCCTCCTCT yeiE 2323925 - 2323062 - | putative DNA-binding transcriptional regulator TERM 3038 2325012 - 2324997 - g 76 -3.2 -5.09225 | AGCGCATTGAAAAAA GCGG GGGCGAAA CCGC TGCTGATGGCGCTGG yeiH 2324046 - 2325095 + | hypothetical protein TERM 3039 2325469 - 2325432 - g 83 -7.8 -4.58283 | gap 1, overlap 2325458 GAAGCGCTGGAAAAA TCAC-GCGATGCCTTTC TCGAT GAAATGCAGCGCTGTGA ACAACTCGGCTTAAC nfo 2325174 - 2326031 + | endonuclease IV TERM 3040 2326050 - 2326087 + T 95 -12.9 -3.73486 | opp_overlap 2326060, overlap 2326060 TCAATGTTCTTCAGG CAATAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTAGCG TGTTTCTCTTATGCC TERM 3041 2326077 - 2326060 - T 100 -11.3 -5.4833 | opp_overlap 2326050 2326060 TCAGGCAATAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTAGCGTGTTT TERM 3042 2326060 - 2326077 + T 100 -11.3 -5.10077 | opp_overlap 2326060, overlap 2326050 TCAGGCAATAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTAGCGTGTTT fruA 2327784 - 2326096 - | fructose-specific PTS system IIBC component fruK 2328739 - 2327801 - | 1-phosphofructokinase fruF 2329869 - 2328739 - | bifunctional fructose-specific PTS IIA/HPr protein TERM 3043 2329770 - 2329796 + g 71 -10.1 -3.55563 | gap 1, opp_overlap 2329756, overlap 2329790 2329792 AGCCGCCCGCCACAT TCCCCGCCTGCG CTAA CGC-GGCGGCGA TTTGCCGAATGGCCT TERM 3044 2329956 - 2329921 - H 86 -2.7 -5.67967 | gap 2 ACTATGAGAAAAAAA GCGCCAATCTGAGTTAT CAAA AAAAC-CAGATC-GCGC TGAAACGTTTCAAGA TERM 3045 2330069 - 2330091 + H 93 -6.2 -5.64421 | opp_overlap 2330069 AACAGACCCTCAATA GCTGACGCAT AAA AGGCTTCAGC TTTTTTCTTTCAGCT TERM 3046 2331133 - 2331158 + G 74 -11.1 -3.18681 | overlap 2331134 GCTTTTATGCGGGTA TGTTGCTGGCG CACG CGCCGGCGACG TTGCTCGGCTTGCAG TERM 3047 2331134 - 2331157 + G 71 -12.4 -2.50994 | overlap 2331133 CTTTTATGCGGGTAT GTTGCTGGCG CACG CGCCGGCGAC GTTGCTCGGCTTGCA setB 2330238 - 2331419 + | proton efflux pump tnpR 2332913 - 2331705 - | transposase of Tn10 SC2225 2333487 - 2333017 - | hypothetical protein SC2226 2333611 - 2333489 - | putative inner membrane protein TERM 3048 2334328 - 2334310 - H 83 -4.6 -5.27335 | overlap 2334291 TTGTCCAAAGAAAAA TCCAGATT TAA AATGTGGA CGTCATCATGATCAG TERM 3049 2334774 - 2334748 - g 89 -13.8 -3.59247 | overlap 2334739 GAAGAACGTTTCAAA GGCGACGATATC GTT GATACCGTCACC CTGAGCCGTCGCGGC yeiP 2334577 - 2335149 + | elongation factor P TERM 3050 2335177 - 2335191 + F 82 -5.6 -5.10665 | overlap 2335161 2335176 TCGGCTGCGCCCCAG GGCGCA GTC TGCCCC TTTTATTTATTGACT yeiR 2335361 - 2336347 + | hypothetical protein yeiU 2336350 - 2337015 + | hypothetical protein TERM 3051 2337148 - 2337109 - f 70 -8.8 -3.38088 | gap 1, opp_overlap 2337111, overlap 2337111 AACCTATGTAATTAA CATTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAATT TATGATGATATTCCC TERM 3052 2337111 - 2337146 + F 100 -13.6 -4.01853 | gap 1, opp_overlap 2337109 2337111 CCTATGTAATTAACA TTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAA TTTATGATGATATTC TERM 3053 2337146 - 2337111 - f 77 -11.4 -3.25652 | gap 1, opp_overlap 2337111, overlap 2337109 CCTATGTAATTAACA TTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAA TTTATGATGATATTC TERM 3054 2337207 - 2337219 + F 72 -4.7 -4.60924 | opp_overlap 2337208, overlap 2337208 TCCTCTGCAAAATGA ACGGG TTG CCCGA TTTTTAAACGATTTG TERM 3055 2337218 - 2337208 - f 72 -8.2 -3.66908 | opp_overlap 2337208 2337207 CCTCTGCAAAATGAA CGGG TTG CCCG ATTTTTAAACGATTT TERM 3056 2338057 - 2338043 - g 82 -5.6 -5.0538 | CCGTACTGGAAAAAA CGCTAC AAT GAAGCG CGTCGAGTTCTGAGC spr 2337509 - 2338081 + | putative outer membrane lipoprotein TERM 3057 2338128 - 2338155 + F 74 -11.4 -2.90804 | opp_overlap 2338133, overlap 2338133 CTGATGAGACGACAT AAAAAGCACTGC TTCG GCAGTGCTTTTG CTTATTATCCCTTCT TERM 3058 2338133 - 2338150 + F 95 -11.3 -4.59414 | opp_overlap 2338133, overlap 2338128 GAGACGACATAAAAA GCACTGC TTCG GCAGTGC TTTTGCTTATTATCC TERM 3059 2338150 - 2338133 - f 100 -11.3 -5.02502 | opp_overlap 2338133 2338128 GAGACGACATAAAAA GCACTGC TTCG GCAGTGC TTTTGCTTATTATCC rtn 2338406 - 2339962 + | hypothetical protein TERM 3060 2340152 - 2340138 - g 77 -8.6 -4.10552 | GCCCAGGAAATCAAA GAAAGC TAC GCTTTC GCCGTACTCGGCGAA yejA 2340069 - 2341874 + | putative ABC transporter periplasmic binding protein TERM 3061 2342587 - 2342599 + G 70 -6.9 -4.08767 | TACCGGTGTTGGCGA CCGTC ATC GGCGG TTTTGCCGCCCTGAC yejB 2341884 - 2342978 + | putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component TERM 3062 2343959 - 2343979 + G 71 -8.1 -3.80573 | CTGCTGATTTTTATC GGCGAAGCG GTA CGCGACGCC TTTGATCCTGCTAAG yejE 2342978 - 2344003 + | putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component TERM 3063 2344361 - 2344344 - g 73 -5.5 -4.59109 | opp_overlap 2344334 CATACGCTGGAAAAA CAGCTCT ATGA AGTGCTG TCGCTCCACCGGGGA yejF 2344005 - 2345594 + | ABC transporter ATPase yejG 2345942 - 2345598 - | hypothetical protein SC2237 2346336 - 2346238 - | hypothetical protein bcr 2347523 - 2346333 - | bicyclomycin/multidrug efflux system rsuA 2348246 - 2347551 - | 16S rRNA pseudouridylate synthase A TERM 3064 2348294 - 2348278 - H 72 -8.7 -3.81258 | GTAATAATACGGAAA TCGGGCA TTC TACCCGA AAAAAGGGAATTGCT yejH 2348398 - 2350158 + | putative ATP-dependent helicase rplY 2350283 - 2350567 + | 50S ribosomal protein L25 TERM 3065 2350582 - 2350613 + T 78 -12.4 -2.71246 | opp_overlap 2350590, overlap 2350590 ATCGCCTGGAAGTTG AAGAAAAACCCCGC CCCG GCGGGGTTTTTTTA TGCGTTTAATTGAAT TERM 3066 2350605 - 2350590 - T 100 -11.8 -5.10208 | opp_overlap 2350582 2350590 GAAGTTGAAGAAAAA CCCCGC CCCG GCGGGG TTTTTTTATGCGTTT TERM 3067 2350590 - 2350605 + T 100 -11.8 -5.68039 | opp_overlap 2350590, overlap 2350582 GAAGTTGAAGAAAAA CCCCGC CCCG GCGGGG TTTTTTTATGCGTTT SC2242 2351296 - 2350676 - | putative inner membrane protein TERM 3068 2351234 - 2351219 - G 72 -4 -4.8083 | gap 1 CAACATCATCAAAAA TGCG-AC AAT GTGCGCA TACAAAACCTGCCGA yejK 2352331 - 2351324 - | nucleoid-associated protein NdpA yejL 2352511 - 2352738 + | hypothetical protein TERM 3069 2353273 - 2353294 + G 70 -5.1 -4.50988 | overlap 2353275 2353278 2353282 CACGCGCCGTCGCCA TTTCGCAAG GCCG CTTGCGGCA TTCTTTTTCGTCTCC TERM 3070 2353278 - 2353297 + G 72 -2 -4.85177 | overlap 2353275 2353273 2353282 GCCGTCGCCATTTCG CAAGGCCG CTTG CGGCATTC TTTTTCGTCTCCTTT TERM 3071 2353923 - 2353893 - g 71 -7.6 -3.92075 | gap 1, overlap 2353876 AGTCTGATGCACAAA CGGCC-AGCCAGT GGATAG ACTGGCTTGGGCG CTACGCACAGGAAGA yejM 2352770 - 2354530 + | alkaline phosphatase superfamily hydrolase TERM 3072 2354697 - 2354714 + T 100 -9.1 -5.76633 | opp_overlap 2354696 2354697 AATTCCCCTTAAAAG CCAGCCT GCCA GGGCTGG TTTTTTTATATATCC TERM 3073 2357115 - 2357149 + T 71 -10.6 -2.67244 | overlap 2357114 2357114 CCGCGTGTCCTGTGC CCTCCTCACCCTGTGC TGT GTCCAGGGTGAGGCGA TGGGTTTCACTGTAC tfa 2358163 - 2357759 - | bacteriophage tail fiber assembly protein vtf 2358995 - 2358204 - | putative tail fiber protein of phage TERM 3074 2358761 - 2358777 + g 73 -5.8 -4.38927 | opp_overlap 2358758, overlap 2358762 2358767 GCGCGGCAATCAGTT TGCGGA CAAAC TCCGCG TTTGTTGTCTGAAGC TERM 3075 2359137 - 2359149 + GH 71 -10.5 -2.64354 | overlap 2359139 2359147 CGATGCTGATGACGA GGCGG CTG CCGCC GTTCTGGCTGTGTCA TERM 3076 2359171 - 2359196 + GH 73 -5.9 -4.4648 | GCTGTGTCAGCCGAC GCCGCGCTGGC TGAT GCCTCCCCGGC TTTTGTGGTCGCCGT SC2248 2359087 - 2359269 + | hypothetical protein TERM 3077 2359290 - 2359273 - gT 77 -8.4 -4.08064 | opp_overlap 2359273 AATTCCCCTTGAAAA CCAGCC TGTCAG GGCTGG TTTTTTTATGCCTAC TERM 3078 2359273 - 2359290 + GT 100 -9.1 -5.64274 | opp_overlap 2359273 AATTCCCCTTGAAAA CCAGCCT GTCA GGGCTGG TTTTTTTATGCCTAC msgA 2359241 - 2359501 + | homolog of virulence protein MsgA SC2250 2360250 - 2359693 - | putative outer membrane protein TERM 3079 2360856 - 2360866 + H 74 -6.8 -4.3534 | TCAGCTAATTACTCG CCTG TCA CAGG TTTTACTACTTACCC narP 2360986 - 2361633 + | transcriptional regulator NarP TERM 3080 2361670 - 2361637 - T 86 -10.9 -3.75105 | gap 1, opp_overlap 2361641 2361642, overlap 2361641 GGAATGCAGTAACAA GCCAGGCCCGATGGCG CCA CGCCACTGGGCC-GTC AGGGCATTATTTCTC TERM 3081 2361667 - 2361641 - T 90 -15.8 -2.67428 | opp_overlap 2361641 2361642, overlap 2361637 TGCAGTAACAAGCCA GGCCCGATGGCG CCA CGCCACTGGGCC GTCAGGGCATTATTT ccmH 2362720 - 2361677 - | putative heme lyase subunit, cytochrome c-type biogenesis TERM 3082 2361934 - 2361944 + g 87 -8.2 -4.62069 | CCGCGTAGCCCAGCG CCGC ATC GCGG TTTTTCGGGTCCAGG TERM 3083 2362302 - 2362264 - G 74 -10 -3.64703 | overlap 2362265 2362291 CCCCCGGCACGTAAA CGCCCCACCCGGCGCGCG CGC CGCAAACCGGGGGGTCCG CCGGCAGCGGCTCCC TERM 3084 2362337 - 2362291 - G 100 -21.4 -3.53012 | opp_overlap 2362325 2362326, overlap 2362265 2362264 CGCGCGCGCCGCAAA CCGGGGGGTCCGCCGGCAGCGG CTC CCGGCGCAGGCGCACCCGCCGG CGCGTGCGGGCGACG ccmG 2363274 - 2362717 - | heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis ccmF 2365202 - 2363271 - | cytochrome c-type biogenesis protein ccmE 2365678 - 2365199 - | cytochrome c-type biogenesis protein CcmE ccmD 2365887 - 2365675 - | heme exporter protein C, cytochrome c-type biogenesis protein TERM 3085 2365845 - 2365834 - G 100 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TACC CGCC CATGGCGAAAAAATC TERM 3086 2365869 - 2365859 - G 76 -3.2 -5.03314 | CCCATGGCGAAAAAA TCGC TCC ACGA TGAAAATGCCGGACT ccmC 2366630 - 2365884 - | heme ABC exporter TERM 3087 2366037 - 2365998 - G 83 -12.8 -3.25304 | gap 1, opp_overlap 2366005 2366027, overlap 2365988 2365999 AAAGAGCAGCAGGAA GCCGGCGATG-GCCCAGCG CAG CGGCGAGCGCATCGCCGGG TCGATGCTCTGCTGC TERM 3088 2366036 - 2365999 - G 89 -16.3 -2.54459 | gap 1, opp_overlap 2366005 2366027, overlap 2365998 2365988 AAGAGCAGCAGGAAG CCGGCGATG-GCCCAGCG CAG CGGCGAGCGCATCGCCGG GTCGATGCTCTGCTG ccmB 2367332 - 2366673 - | heme ABC exporter TERM 3089 2367202 - 2367179 - G 74 -11 -3.31144 | gap 1 CCGCCACCTGGATAA TGCCCGGCGCG ATA CGCGCCAG-CA GCTGCGGCTGCGGCC ccmA 2367946 - 2367329 - | cytochrome c biogenesis protein CcmA TERM 3090 2367672 - 2367687 + g 78 -6 -4.83169 | opp_overlap 2367659, overlap 2367639 2367674 AAGTGCAGGTTCTCC CGCGCC GTCA GGCGGG TTTTTATCCCCGGCT TERM 3091 2367783 - 2367825 + g 75 -6 -4.56775 | opp_overlap 2367775 CAGTACACCTCCCCG CCGTCCGGGCGCGCCAGC CCGGTCA GCAGGCGCAGCAGGGTGG TTTTTCCGGCGCCGT napC 2368569 - 2367967 - | cytochrome c-type protein NapC napB 2369028 - 2368579 - | diheme cytochrome c550 TERM 3092 2368684 - 2368670 - G 70 -7 -4.09117 | TGCAGGCAGAAATAA CGACGC GGC GCGACG TTGCCCGACACTTTA napH 2370013 - 2369144 - | quinol dehydrogenase membrane component TERM 3093 2369889 - 2369876 - G 73 -5.9 -4.43272 | ATGCAAAACCCAAAA GCCCA GCCA CGGGC CGCTGAGAAACATCC TERM 3094 2369944 - 2369965 + g 86 -6.5 -5.00616 | gap 1, opp_overlap 2369918 2369938 2369941, overlap 2369945 GGCGTAACACCAGCC AGC-GGTGGC TAC GCCACCAGCC TTTTTTCGCCCGCGC TERM 3095 2369945 - 2369964 + g 71 -10 -3.60048 | gap 1, opp_overlap 2369938 2369941, overlap 2369944 GCGTAACACCAGCCA GC-GGTGGC TAC GCCACCAGC CTTTTTTCGCCCGCG napG 2370695 - 2370000 - | quinol dehydrogenase periplasmic component TERM 3096 2370561 - 2370583 + g 83 -10.4 -3.92324 | GCCAGGCGGACGCAG CCGCACGCCC GTT GCGCGCGCGG TTTGCTGTTGCAAGC napA 2373188 - 2370702 - | nitrate reductase TERM 3097 2371568 - 2371592 + g 71 -7.2 -4.06419 | gap 2, overlap 2371566 GCCAGAACTGCGTGC GGCG-TT-CGGC GTT GCCGTAAGCGCC TTCTTTCTCAACCCA napD 2373715 - 2373185 - | periplasmic nitrate reductase eco 2374349 - 2374837 + | ecotin precursor yojI 2376689 - 2375046 - | multidrug transporter membrane component/ATP-binding component TERM 3098 2375312 - 2375322 + g 93 -4.6 -5.49809 | CCAGCGCCAGCAGCA GTGC AAT GCGC TTTTTTTGCCCTTTC TERM 3099 2375646 - 2375634 - G 74 -3.3 -4.8622 | overlap 2375636 GCCGCCAATTAAAAA CAGCA GTT CGCCG CGGTGAATCGTCAGG TERM 3100 2376548 - 2376562 + g 79 -11.4 -3.64822 | overlap 2376533 CCGGCAGCACCATGA CGGTGG TGT CCACCG TTTCAATCAGGCGCT alkB 2377415 - 2376765 - | DNA repair system specific for alkylated DNA ada 2378479 - 2377418 - | O6-methylguanine-DNA methyltransferase/transcription activator/repressor TERM 3101 2378157 - 2378127 - G 73 -6.1 -4.41348 | overlap 2378123 CTCGCTTTAAACAAA CGGTGCAGATGAA ACGGG CTCATCGCCACCG CCTGCGCCAGAGACG TERM 3102 2378345 - 2378321 - G 74 -2.1 -5.00616 | overlap 2378339 CGCGTTGGCAAAAAA GCGAACATT TTTACGT AACGCCCGC TTCGAGTGACAAGAA TERM 3103 2378393 - 2378374 - G 74 -2.1 -5.01732 | gap 1, overlap 2378362 2378375 2378376 AAGGGCGGCAAAAAA CGCCGGTG GTTCG CACCG-CA AAAACGAAACGCCCA apbE 2379612 - 2378560 - | thiamine biosynthesis lipoprotein ApbE TERM 3104 2379692 - 2379705 + r 75 -9.5 -3.55815 | opp_overlap 2379692 TAAGGCATGAAAAAA GGGCC CGCA GGCCC TTTAGCAACATCTTT TERM 3105 2379705 - 2379692 - R 100 -9.5 -5.18357 | opp_overlap 2379692 TAAGGCATGAAAAAA GGGCC CGCA GGCCC TTTAGCAACATCTTT ompC 2380863 - 2379727 - | outer membrane porin protein C TERM 3106 2381263 - 2381281 + H 100 -11 -5.82388 | TTACCCCTATTTCAA CCGGATGC TTC GCATTCGG TTTTTTTTACCCTTT TERM 3107 2381638 - 2381653 + GH 71 -4.6 -4.58786 | GATTCTCCCTTCTAC CGGGAA GCAT TACCCG TTTCTTCTTATTGCT yojN 2381592 - 2384261 + | phosphotransfer intermediate protein in two-component regulatory system with RcsBC TERM 3108 2384737 - 2384699 - gT 77 -7.5 -4.36914 | gap 1, overlap 2384702 GTCTGCTGGAGAAAA TCAGCG-CAGGCGGTTAC GGCG ATAAGCGCCTGTCGCCAA AAGAGAGCGAAGTAT rcsB 2384233 - 2384928 + | transcriptional regulator RcsB TERM 3109 2384997 - 2385025 + T 85 -6.6 -5.24129 | gap 1, overlap 2384998 GACTCATCTTTTGCA GGCCGGACAGGCG ACGC CGCCA-TCCGGCA TTTTTTATGCCCGCG TERM 3110 2384998 - 2385024 + T 79 -10.1 -3.73995 | gap 1, overlap 2384997 ACTCATCTTTTGCAG GCCGGACAGGCG ACGC CGCCA-TCCGGC ATTTTTTATGCCCGC SC2274 2387876 - 2385030 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 3111 2387977 - 2387960 - R 100 -14.1 -5.29846 | AACGGCAAAGAAAAA GGGCCGG ATAT CCGGCCC TCGCACAGCAATAAC gyrA 2390630 - 2387994 - | DNA gyrase subunit A TERM 3112 2389572 - 2389534 - G 71 -7.4 -3.92746 | gap 1 CGCAGTTCAAAAATA GTCCGACGCGTCACCAC TTCACG GCGGTGGCGCA-CGAAC GCTGAAATAATATCT dgoA 2392242 - 2391040 - | putative dehydratase protein tub 2393204 - 2392257 - | putative permease TERM 3113 2394252 - 2394267 + G 72 -2.6 -4.8667 | TACCTCAAACTGGAT CATGAT TTTC ATTATG TTTTTGTGAAATATG TERM 3114 2394432 - 2394422 - g 76 -3.2 -5.07567 | opp_overlap 2394425 2394428, overlap 2394428 GGATATGTTAAAAAA CAAC AAC GTCG AGGGCGTCTGTAATT TERM 3115 2394505 - 2394483 - g 74 -10.6 -3.48395 | overlap 2394484 2394495 2394496 AGCGGTTTTACAGAA CGCGCAAGAA AAC TTCTTGCGCT GAAAGCGTAATAAAG TERM 3116 2394504 - 2394484 - g 81 -14.1 -2.68823 | overlap 2394483 2394495 2394496 GCGGTTTTACAGAAC GCGCAAGAA AAC TTCTTGCGC TGAAAGCGTAATAAA ntrA 2393820 - 2394515 + | GntR family transcriptional regulator ubiG 2394547 - 2395326 + | 3-demethylubiquinone-9 3-methyltransferase TERM 3117 2395349 - 2395375 + F 83 -9.4 -4.21607 | opp_overlap 2395349, overlap 2395340 GAATTTTCCTATAAG GGTTGCGTTAGA TCA TCGGGCGCAACC TTTCTCTTCGATGAA TERM 3118 2395406 - 2395416 + F 100 -4 -6.24157 | GAAATCAGCATTCGA TCAA ATT TTGA TTTTTTTTTATGAAT TERM 3119 2397417 - 2397407 - g 70 -6.8 -4.20084 | ACCACCTATGCAAAA GGCA TTT TGCC GATCGACACCTACAA nrdA 2395682 - 2397967 + | ribonucleotide-diphosphate reductase subunit alpha nrdB 2398080 - 2399210 + | ribonucleotide-diphosphate reductase subunit beta TERM 3120 2399440 - 2399415 - g 93 -16.3 -2.87931 | TCCAGCCGGGAGAGA TTTTGCCCTGC TGCT GCAGGGCAAAA GGCGATATCGAAATC yfaE 2399210 - 2399464 + | 2Fe-2S ferredoxin YfaE SC2283 2400752 - 2399466 - | putative permease yvbU 2400818 - 2401696 + | LysR family transcriptional regulator glpQ 2402882 - 2401812 - | glycerophosphodiester phosphodiesterase TERM 3121 2402663 - 2402682 + g 100 -13.6 -3.97947 | opp_overlap 2402652 GGTAGTGGTCATGGA GGACGACC AGAT GGTCGTCC TTTGTCATCACTAAA glpT 2404245 - 2402887 - | sn-glycerol-3-phosphate transporter TERM 3122 2403092 - 2403108 + g 77 -3.5 -5.00616 | opp_overlap 2403078 2403088, overlap 2403094 AGACCGGTAAAGCCC GCCGCCG TAC CCGCCGC TTTTTTCGGCGCCAG TERM 3123 2403981 - 2403966 - G 78 -6 -4.82901 | opp_overlap 2403979 CTGCCGGCAGAAAAA CGCGCG GATT CGAGCG ATCGGACACCGAACC TERM 3124 2404538 - 2404524 - g 86 -7.8 -4.70739 | overlap 2404515 GAAAAACAATGAAAA CTCGCG ACT CGCAAG CAAGTGACGTGATTA TERM 3125 2404594 - 2404608 + G 70 -9.2 -3.7456 | opp_overlap 2404572 AGGGATCGCCCGCGA CTGCGC GCT GCGCGG TTTACGTGTCATTCT TERM 3126 2404956 - 2404943 - g 77 -8.1 -4.07687 | ATCGGTGCGGTAAAA GTGCC GGAT GGCAC CGTGGACTCTTTCCG glpA 2404517 - 2406145 + | sn-glycerol-3-phosphate dehydrogenase subunit A glpB 2406135 - 2407394 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 2407391 - 2408581 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 3127 2408609 - 2408589 - f 100 -18.3 -4.8622 | opp_overlap 2408589 TCGGCTAAGTAAAAA GCGCCGGAG CCC CTCCGGCGC TATTACCCTACTCAC TERM 3128 2408589 - 2408609 + F 100 -18.3 -3.07043 | opp_overlap 2408589 TCGGCTAAGTAAAAA GCGCCGGAG CCC CTCCGGCGC TATTACCCTACTCAC TERM 3129 2408914 - 2408899 - f 78 -4.7 -5.00467 | opp_overlap 2408899 2408894, overlap 2408894 TGAATAATAATAAAA TCAGG TCTATG CCTGA TTTAATATATCTCCC elaD 2409007 - 2410029 + | deubiquitinase TERM 3130 2410129 - 2410109 - T 93 -15.5 -2.9248 | overlap 2410106 ATAAGTATATAAGGA TGGGAAGGC CAA GCCTTCCCA CTAAAAGTTCTATGC cinA 2410324 - 2410139 - | putative cytoplasmic protein TERM 3131 2410303 - 2410314 + g 83 -5.8 -4.88067 | TGCGTAAGGCATACG TGCC ATCC GGCA TTTTTCTCAATAACT yfaU 2411124 - 2410321 - | putative aldolase TERM 3132 2410506 - 2410484 - G 91 -7.6 -5.03314 | overlap 2410485 2410486 TCGACCGCCAAAAAA CCCGCCGC TTTTCCG GCGGCGCG AATACGATAAATACA TERM 3133 2410502 - 2410485 - G 71 -9.8 -3.61506 | overlap 2410484 2410486 CGACCGCCAAAAAAC CCGCCG CTTTTC CGGCGG CGCGAATACGATAAA yfaV 2412439 - 2411150 - | MFS family transporter yfaW 2413700 - 2412495 - | paral putative galactonate dehydratase yfaX 2414496 - 2413714 - | putative transcriptional regulator cinA 2415942 - 2414746 - | competence damage-inducible protein A TERM 3134 2416050 - 2416029 - H 70 -9.3 -3.37164 | opp_overlap 2416049, overlap 2416027 2416030 GGAAAAAGAGGAATA TGGCGCGAC GATT GCCGCGCCG TTAGCATCAAAAGCT TERM 3135 2416049 - 2416030 - H 78 -12.8 -2.61214 | overlap 2416029 2416027 GAAAAAGAGGAATAT GGCGCGAC GATT GCCGCGCC GTTAGCATCAAAAGC TERM 3136 2416080 - 2416063 - H 83 -9.1 -4.30576 | opp_overlap 2416049 CCGTTAGCATCAAAA GCTGGCG TTTA CGCCAAC ATAAGGGCCGTCAGC TERM 3137 2416797 - 2416787 - H 91 -6.8 -5.5112 | opp_overlap 2416787 TGGATTAACAAAAAA CGCA GTC TGCG TTATCGCTTCCATTT yfaO 2416877 - 2417302 + | hypothetical protein TERM 3138 2417307 - 2417326 + T 76 -9.3 -3.76413 | opp_overlap 2417306 2417303 GGTTATTATAATGAC GACAGCC GCTTCA GGCTGTC TTTACGCTTTTAACA ais 2417952 - 2417347 - | aluminum inducible protein TERM 3139 2418022 - 2418010 - H 76 -7.7 -4.27965 | overlap 2418005 ACAATTAAAATGAAA TTCCG CGA CGGAA GACCAGACCAGAAAC yfbE 2418251 - 2419390 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase pmrF 2419393 - 2420376 + | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 3140 2422621 - 2422605 - g 76 -2.9 -5.00616 | overlap 2422607 2422608 CTGGCCGGGAAAAAA TATCGGC AAC GCCAATG CCGGGATTATTCGTG yfbH 2422351 - 2423250 + | putative cytoplasmic protein TERM 3141 2423443 - 2423433 - g 71 -4.6 -4.59773 | CGTTATTTTGAAAAA CCGA TAG CCGG TTACTGGATAAACCG arnT 2423247 - 2424893 + | 4-amino-4-deoxy-L-arabinose transferase yfbW 2424890 - 2425225 + | putative inner membrane protein yfbJ 2425225 - 2425602 + | hypothetical protein menE 2427319 - 2425952 - | O-succinylbenzoic acid--CoA ligase menC 2428278 - 2427316 - | O-succinylbenzoate synthase TERM 3142 2427697 - 2427676 - G 77 -11.5 -3.57144 | opp_overlap 2427668 2427678 GGTTTCACGGGCAAA GGCGCGGGA ATCA TCCCGCGTC TTACACGGTTCTTCG TERM 3143 2427678 - 2427695 + g 81 -12.7 -3.05066 | opp_overlap 2427676, overlap 2427668 TTTCACGGGCAAAGG CGCGGGA ATCA TCCCGCG TCTTACACGGTTCTT menB 2429135 - 2428278 - | naphthoate synthase yfbB 2429908 - 2429150 - | acyl-CoA thioester hydrolase YfbB TERM 3144 2429590 - 2429608 + g 76 -11.7 -3.08679 | GACCGCCTTCGACCA CCAGGCC GCACA GGCCTGG TATTCCCTGGCAGGC menD 2431575 - 2429905 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 3145 2430895 - 2430915 + g 76 -5.3 -4.82901 | overlap 2430897 2430899 TTCCGCGCTCATACG CCCGGCG ACGACAA CGCCGCG TTTTTGTCGCCAGAA menF 2432956 - 2431661 - | menaquinone-specific isochorismate synthase TERM 3146 2431925 - 2431899 - G 71 -5.8 -4.30995 | gap 1 TGTTCTATAAAACAA CGCGCGGGTTC ACGAGG GATCCCG-GCG ACCGCTGCGGTAGGC TERM 3147 2432098 - 2432117 + g 74 -2.1 -5.00846 | opp_overlap 2432098 AGATGTCTTCGACAA CCAGC ATATTTTCTC GCTGG TTTTTATCGTCTTTC TERM 3148 2432994 - 2432978 - R 78 -6.5 -4.56597 | opp_overlap 2432990 2432991 2432993, overlap 2432979 2432990 CCTCCCTGTTAAAAA CCCCACA TTA TACGGGG TACTGCCCTAAAAAA elaB 2433362 - 2433057 - | hypothetical protein TERM 3149 2433115 - 2433125 + g 81 -6.8 -4.72986 | opp_overlap 2433115 GCGCCTACGCCAATA CCCT GCC AGGG TTTTTCATGAACGTA elaA 2433878 - 2433417 - | hypothetical protein TERM 3150 2433535 - 2433514 - G 72 -2.1 -4.84017 | AACCGCGCATAAAAA GGTTGCAGA TGCG CCTGCGCCC CCAGATATAGCGGCT elaC 2433939 - 2434856 + | ribonuclease Z cheV 2434922 - 2435923 + | putative chemotaxis signal transduction protein TERM 3151 2435925 - 2435963 + T 77 -11 -3.14132 | opp_overlap 2435929 2435931 GCAAAAGCGCCTGAC GTAACAGGGGATGCCT ACAGTAC AGGCATCCCCTGACGC TTAGTGAGACAAGCC TERM 3152 2435959 - 2435929 - T 100 -18.4 -3.05715 | opp_overlap 2435925, overlap 2435931 AAGCGCCTGACGTAA CAGGGGATGCCTAC AGT ACAGGCATCCCCTG ACGCTTAGTGAGACA TERM 3153 2435957 - 2435931 - T 93 -15.2 -3.08679 | opp_overlap 2435925, overlap 2435929 GCGCCTGACGTAACA GGGGATGCCTAC AGT ACAGGCATCCCC TGACGCTTAGTGAGA yfbK 2437745 - 2435964 - | von Willebrand factor type A domain-containing protein TERM 3154 2438536 - 2438569 + r 80 -12.6 -2.95097 | gap 2, opp_overlap 2438532 2438533, overlap 2438538 2438546 2438562 CACTAATACAACGTT GATGCCGGAT--GGCG ACTA CGCCTTATCCGGCATC TGGTTCTGTGTTCGT TERM 3155 2438674 - 2438658 - R 73 -9.5 -3.29829 | opp_overlap 2438657 2438658, overlap 2438669 CACAGGTTTTCATAA GTTGGAT GCA ATCCAAC ATTTAGAGGCTCAGG TERM 3156 2438709 - 2438726 + r 93 -12.7 -3.66018 | GCTCATCAGCCTCAA CCGCCGA TAAA TCGGCGG TTATTGACATCATCA nuoN 2440207 - 2438750 - | NADH dehydrogenase subunit N TERM 3157 2439971 - 2439941 - G 83 -11.8 -3.65351 | CCACGGGTAGGCAAA GGTACAGGTGGCGA GGC TCGCCAGCAGCACC AGCCCGGTGTAGAGC nuoM 2441743 - 2440214 - | NADH dehydrogenase subunit M TERM 3158 2441535 - 2441523 - G 70 -6.9 -4.18802 | ATAGAGATGCCAAAA CGCGG GAT CCACG GCAGGACAAATTCAG nuoL 2443898 - 2442057 - | NADH dehydrogenase subunit L TERM 3159 2442319 - 2442353 + g 71 -9.9 -3.53012 | opp_overlap 2442297 2442313, overlap 2442315 2442320 CCCAGCAGACGGCCC GGCGCGCTGTTGGCG ATCGA CGTCACCAGCGTGCG TTTACCCAGCCACAG TERM 3160 2442320 - 2442352 + g 79 -13.4 -2.71712 | opp_overlap 2442313, overlap 2442315 2442319 CCAGCAGACGGCCCG GCGCGCTGTTGGCG ATCGA CGTCACCAGCGTGC GTTTACCCAGCCACA nuoK 2444197 - 2443895 - | NADH dehydrogenase subunit K nuoJ 2444748 - 2444194 - | NADH dehydrogenase subunit J nuoI 2445301 - 2444759 - | NADH dehydrogenase subunit I nuoH 2446293 - 2445316 - | NADH dehydrogenase subunit H TERM 3161 2446145 - 2446106 - G 76 -12.8 -2.79679 | gap 1, opp_overlap 2446107 AACATCTTGATCATA TCCGCGACCAGCTGGAGCG AGC CGCCCCAGCCAA-CGCGGT TTGGTCCATAACGGT nuoG 2449022 - 2446290 - | NADH dehydrogenase subunit G TERM 3162 2447515 - 2447531 + g 74 -2.1 -5.00616 | CTACCGGCGTTAGTG CCGGAGA TAA TCAGCGG TTTTTTCGCGCCGGC TERM 3163 2448838 - 2448852 + g 70 -5.6 -4.46404 | ATCACCAGGCGACCA CGCGTA TCT TCCGCG TTTTGGTATTGCTTC nuoF 2450384 - 2449047 - | NADH dehydrogenase I subunit F nuoE 2450881 - 2450381 - | NADH dehydrogenase subunit E nuoC 2452686 - 2450884 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 3164 2452406 - 2452395 - G 73 -5.8 -4.37886 | overlap 2452403 2452404 TCAGGTGGTAGAAAA CGGA AAAA TCCG CGGCGGGTAACCCGT TERM 3165 2452427 - 2452403 - G 100 -9.1 -4.89729 | overlap 2452395 2452404 TAGAAAACGGAAAAA TCCGCGGCGGG TAA CCCGTCACGGT GCGTACGCAGGCGTT TERM 3166 2452426 - 2452404 - G 85 -12.6 -3.5221 | overlap 2452395 2452403 AGAAAACGGAAAAAT CCGCGGCGGG TAA CCCGTCACGG TGCGTACGCAGGCGT nuoB 2453435 - 2452773 - | NADH dehydrogenase subunit B TERM 3167 2453349 - 2453372 + g 95 -11 -4.57073 | overlap 2453339 GTTAACTTCCTGCTC CAGGGGGTCG GTTA CGATCTCCTG TTTTTGCAGGGGGTA nuoA 2453894 - 2453451 - | NADH dehydrogenase subunit A TERM 3168 2453596 - 2453582 - G 89 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCAACCCAGCCGC TERM 3169 2453999 - 2453981 - R 95 -2.4 -6.13503 | overlap 2453982 2453983 GAGGAATAAAAAAAA CCCTACAA TTA CTGTAGAA AATGATAAAAACAGC SC2329 2454441 - 2454289 - | putative cytoplasmic protein TERM 3170 2454482 - 2454449 - R 100 -9.6 -5.61596 | gap 1, opp_overlap 2454449 ATGGGCACAAAAAAA GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC TTTTTTACATTTACG TERM 3171 2454449 - 2454482 + r 91 -7.4 -5.22039 | gap 1, opp_overlap 2454449 ATGGGCACAAAAAAA GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC TTTTTTACATTTACG lrhA 2455459 - 2454521 - | LysR family NADH dehydrogenase transcriptional regulator TERM 3172 2455380 - 2455357 - G 71 -11.6 -2.96395 | opp_overlap 2455357 ACTGAGTACGACATA CCGCCGCCGC CGCC GCGGCGAAGG TGTTCAGATCGGCAA SC2331 2456310 - 2456125 - | hypothetical protein yfbQ 2456392 - 2457606 + | aminotransferase AlaT TERM 3173 2457614 - 2457637 + F 86 -14 -3.20348 | opp_overlap 2457614 2457607 ATCAATAATCTTAAA TTCAGGCTAC TTCG GTAGCCTGAA TTGCATCTTCATCCG TERM 3174 2457637 - 2457614 - f 100 -14 -3.72453 | opp_overlap 2457614, overlap 2457607 ATCAATAATCTTAAA TTCAGGCTAC TTCG GTAGCCTGAA TTGCATCTTCATCCG TERM 3175 2458016 - 2457995 - g 80 -4.3 -5.10497 | opp_overlap 2457999, overlap 2457982 AAGCGATCGAAAAAA TCGCCCAGC AAAA GCTGGTTGA TATGGCGCCGGATGA yfbR 2457700 - 2458299 + | hypothetical protein TERM 3176 2458362 - 2458389 + T 93 -10.6 -4.39166 | gap 1 AGCGTGATATCCGTA GGCCTGATAAGCG TAG CGCC-ATCAGGCC TTTTCCTGTCTGGGG yfbS 2460231 - 2458405 - | putative response regulator TERM 3177 2458570 - 2458555 - G 86 -11.8 -3.86194 | overlap 2458542 AACCGGCGTCATAAA GGCGGC GGAT GCCGCC ATCGCCACCGCCATC TERM 3178 2459146 - 2459160 + g 77 -11.4 -3.53012 | CAGCGATCCTTCCAG CGCGAC GCC GTCGCG TTTCAGGCCGACCAC TERM 3179 2459618 - 2459628 + g 77 -8.2 -4.13767 | CCGGCCTGTTGTCCG GGCG CAT CGCC TTTTAGCATGAAGCG TERM 3180 2460301 - 2460277 - R 84 -10.8 -3.86346 | gap 1, opp_overlap 2460278, overlap 2460280 CGATTCTGCCATAAA TAT-GCCCCGC CAAA GCGGGGCGATA TCATGATCAGGTCTT TERM 3181 2460297 - 2460280 - R 83 -14.1 -2.70946 | opp_overlap 2460278, overlap 2460277 TTCTGCCATAAATAT GCCCCGC CAAA GCGGGGC GATATCATGATCAGG yfbT 2460967 - 2460308 - | putative phosphatase yfbU 2461472 - 2460978 - | hypothetical protein TERM 3182 2461510 - 2461529 + r 93 -10.8 -4.55689 | opp_overlap 2461510 TGGCGATGAAAAAAA GAAGGCAT TGGT ATGCCTTC TTTTATATGCGTAAT TERM 3183 2461529 - 2461510 - R 100 -10.8 -5.52384 | opp_overlap 2461510 TGGCGATGAAAAAAA GAAGGCAT TGGT ATGCCTTC TTTTATATGCGTAAT yfbV 2462010 - 2461555 - | hypothetical protein TERM 3184 2461876 - 2461897 + g 80 -8.7 -4.07568 | opp_overlap 2461864 2461890, overlap 2461877 AAATCGTATGGCATA GCGCGTCAT ACGA ATGACGCGG TTTTCGACGAAAACG TERM 3185 2461877 - 2461896 + g 76 -12.2 -3.04398 | opp_overlap 2461864 2461890, overlap 2461876 AATCGTATGGCATAG CGCGTCAT ACGA ATGACGCG GTTTTCGACGAAAAC TERM 3186 2463179 - 2463155 - g 70 -2.7 -4.76075 | overlap 2463146 2463156 ATCAGATCAACAAAA TGCTGACCAAA GAG TCCGGTCTGCT GGGTCTGACTGAAGT ackA 2462350 - 2463552 + | acetate kinase TERM 3187 2463556 - 2463583 + F 100 -16.4 -4.37886 | gap 1, overlap 2463558 CTGACTGCCTGATTT CA-CACCGCCAGC CTC GCTGGCGGTGCTG TTTTGTAACCCGTCC TERM 3188 2463558 - 2463580 + F 100 -19.2 -2.8733 | overlap 2463556 GACTGCCTGATTTCA CACCGCCAGC CTC GCTGGCGGTG CTGTTTTGTAACCCG pta 2463629 - 2465773 + | phosphate acetyltransferase TERM 3189 2466553 - 2466520 - g 79 -13.3 -2.70932 | gap 1, overlap 2466525 TCGCCTTTGCAATTA TCATAGCCCCGC-TGA TGG TCAGGCTGGGCTATGA CAGCATTACCACCGT TERM 3190 2467056 - 2467072 + G 74 -7.2 -4.07687 | AGGATGATGATCGCG CCCGCC TTGCT GGTGGG TTTTGCCAAAGGCAT yfcC 2465991 - 2467511 + | hypothetical protein TERM 3191 2467547 - 2467519 - T 95 -11.8 -4.20084 | gap 1, opp_overlap 2467518 ATCATTGATCCAAAA TGCCGGATGAGCA TCAG CGC-CATCCGGCA ATATCTCCATGATTA tktC 2468513 - 2467560 - | putative transketolase TERM 3192 2467752 - 2467768 + g 84 -5.7 -5.03715 | overlap 2467765 GCTGTGGTTTTCACA CGTGACG ATA CGCCGCG TTTTTTCCGCGTAGT TERM 3193 2468244 - 2468233 - G 71 -5.8 -4.28018 | overlap 2468222 AAGAGCTGATCAAAA CAGC GACG GCTG GCAAAAGCGGTAAAA tktN 2469336 - 2468506 - | putative transketolase TERM 3194 2468698 - 2468712 + g 71 -10 -3.57144 | opp_overlap 2468685, overlap 2468685 CACCGCCAGTAGTCC GGCGAT ATC ATCGCC TTTGACGGTGACGAC TERM 3195 2468991 - 2469017 + g 73 -5.1 -4.58395 | overlap 2468992 2468998 TGCCCTGTCCCAGTG AGC-CGGTCGTGG CGT CCACG-CCGCGCG TTTTTAGCCGATCCG ulaA 2470730 - 2469333 - | ascorbate-specific PTS system enzyme IIC SC2344 2471017 - 2470745 - | putative cytoplasmic protein ptxA 2471541 - 2471098 - | putative phosphotransferase system TERM 3196 2472759 - 2472788 + G 83 -10.1 -4.12532 | gap 1, opp_overlap 2472759 GTTAAATCAGGGAAA CTGGA-GCGATCGA AAA TCCATCGCCTCCAG TTTATGTATGCGGGA TERM 3197 2472788 - 2472759 - g 74 -10.1 -3.74224 | gap 1, opp_overlap 2472759 GTTAAATCAGGGAAA CTGGA-GCGATCGA AAA TCCATCGCCTCCAG TTTATGTATGCGGGA gntR 2471794 - 2472813 + | putative transcriptional regulator yfcD 2473373 - 2472819 - | hypothetical protein TERM 3198 2472844 - 2472858 + g 71 -4.2 -4.66833 | overlap 2472845 TCTTCCGGTTTCTCC TGGAGC GCG GCTTCG TTTTTGGCGTTGCGG yfcE 2473981 - 2473430 - | phosphodiesterase yfcF 2474681 - 2474037 - | putataive glutathione-S-transferase TERM 3199 2474374 - 2474387 + g 100 -9.5 -4.88736 | CACGCCTGAATCTGT CGCGC GCGG GCGCG TTTTTGTAAATCGTG TERM 3200 2474570 - 2474594 + g 81 -3.6 -5.22006 | CCTGGTCCAGATCGC GGGTTTTC AGAGTAAAG GAAAGCCC TTTTTCTTGTAATGC TERM 3201 2474656 - 2474643 - G 74 -2.3 -4.99035 | GTAGGGAGAGAAAAA GTTCG CATC CGACC ACAGCACAATAACAG yfcG 2474824 - 2475471 + | putative glutathione S-transferase TERM 3202 2475531 - 2475521 - f 73 -2.4 -5.14477 | TATACACGGAAAAAA CCTG CGT CCGG CACCCTTATTCGTAT TERM 3203 2476302 - 2476332 + G 83 -12.4 -3.68222 | overlap 2476303 GAGCATTTTGCTCAT GCGCTGGGTCGCGC GCT GCGCCGCCCGGCGA TTATTCGCATTCCGG TERM 3204 2476303 - 2476331 + G 86 -15.9 -2.80612 | overlap 2476302 AGCATTTTGCTCATG CGCTGGGTCGCGC GCT GCGCCGCCCGGCG ATTATTCGCATTCCG TERM 3205 2476431 - 2476419 - g 80 -9.1 -4.07568 | CGGGCGCTGCCAAAA CGGCT TGA AGCCG CCGGATTCGCATTTC yfcH 2475597 - 2476490 + | hypothetical protein TERM 3206 2476508 - 2476539 + T 73 -4.2 -4.86731 | gap 1, overlap 2476511 CCCAAAGCGCCGTAT CCTGCCCGGTGAGCG ATG CGC-CGCCGGGCTTC TTTTATTTCAGCGAG TERM 3207 2476511 - 2476536 + T 100 -14.7 -4.54026 | gap 1, overlap 2476508 AAAGCGCCGTATCCT GCCCGGTGAGCG ATG CGC-CGCCGGGC TTCTTTTATTTCAGC hisP 2477318 - 2476542 - | histidine/lysine/arginine/ornithine transporter subunit hisM 2478036 - 2477329 - | histidine and lysine/arginine/ornithine ABC transporter hisQ 2478719 - 2478033 - | lysine/arginine/ornithine ABC transporter hisJ 2479684 - 2478902 - | histidine ABC transporter ATP-binding protein TERM 3208 2479791 - 2479752 - R 71 -10 -3.14564 | opp_overlap 2479753 2479755, overlap 2479755 2479764 CTATCGTGCCATTAA TCAGGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCCGGT TTATTTTGCATAAAA TERM 3209 2479753 - 2479790 + r 80 -6.9 -4.68908 | opp_overlap 2479752 2479755 2479764, overlap 2479755 TATCGTGCCATTAAT CAGGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCCGG TTTATTTTGCATAAA TERM 3210 2479788 - 2479755 - R 87 -14.7 -2.77899 | opp_overlap 2479755 2479753, overlap 2479752 2479764 TCGTGCCATTAATCA GGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCC GGTTTATTTTGCATA TERM 3211 2479884 - 2479861 - R 90 -10.4 -4.19817 | opp_overlap 2479846 CTTATGCACCCAAAA GGTGCAAAAC ATCT ATTTTGCACC GTGATAGTTCCCCAG argT 2480704 - 2479922 - | lysine/arginine/ornithine ABC transporter ATP-binding protein TERM 3212 2480597 - 2480564 - G 81 -8.1 -4.29929 | opp_overlap 2480566 ATCAAAGCCAATAAA CTCGCCTTTGGCATC TTTT GATGAGAAAGGCGCG TAGGTGGTATCTGTT SC2357 2480976 - 2480824 - | hypothetical protein TERM 3213 2480960 - 2480942 - G 100 -13.2 -4.37092 | ATCGCGGTTACAAAA TTGCCCTG AAA CAGGGCAA CAGGACAATAATGCA ubiX 2481561 - 2480992 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3214 2481121 - 2481110 - G 91 -7.2 -4.98436 | GGAAGATGATAAAAA GCCG GAAC CGGC GGCATAATCACCGCG rocE 2482994 - 2481588 - | putative amino acid transporter TERM 3215 2482267 - 2482241 - G 77 -3.7 -5.07652 | overlap 2482236 GGCCGTAAAACAAAA TGATTCTGAGA CCGAT CCCCAGGATCA CCTTCGGTAAAATAA TERM 3216 2482657 - 2482629 - G 81 -8.1 -4.24342 | gap 1 CTGGTGAGCAATAAA CCCT-GCGGCAG TGAGGT CGGCCGCCAGGG AAAAGACCCAGCTAA TERM 3217 2483052 - 2483026 - R 79 -11.4 -3.38046 | opp_overlap 2483028, overlap 2483024 2483027 2483041 TCGTGAGGTCAAAGA TGCCGCCGCGAC ATA GCCGCGGCGGTT ATGCGTTAACGCGTA TERM 3218 2483051 - 2483027 - R 86 -14.9 -2.62613 | opp_overlap 2483028, overlap 2483026 2483024 2483041 CGTGAGGTCAAAGAT GCCGCCGCGAC ATA GCCGCGGCGGT TATGCGTTAACGCGT TERM 3219 2483028 - 2483050 + r 100 -16.2 -3.41878 | opp_overlap 2483027 2483026 2483024 2483041 GTGAGGTCAAAGATG CCGCCGCGAC ATA GCCGCGGCGG TTATGCGTTAACGCG SC2360 2484161 - 2483058 - | hypothetical protein TERM 3220 2483180 - 2483197 + g 74 -8.4 -3.9712 | AATCTTCAATATCCA CCAGCG TATGAT CGCTGG TTTGTCCTAAGATAG TERM 3221 2483344 - 2483360 + g 100 -13.7 -3.94853 | opp_overlap 2483327 TCGACGCCCAGCTCC CCGACCG GGA CGGTCGG TTTACTGTTCAGTTC TERM 3222 2483618 - 2483576 - G 100 -14.1 -3.85817 | gap 1, overlap 2483594 AGTTTCCCGCAGAAA GCCGCCGGACAGGAATACCG CTGT CGGC-TTCCAGCCGGGCGGC CAGCGCCAGAAAATC SC2361 2485584 - 2484163 - | putative amino acid transporter dcdA 2487072 - 2485675 - | putative diaminopimelate decarboxylase rocR 2487283 - 2488710 + | putative regulatory protein purF 2490263 - 2488746 - | amidophosphoribosyltransferase cvpA 2490789 - 2490301 - | colicin V production protein TERM 3223 2490917 - 2490892 - R 100 -9.8 -5.27938 | ACGCGTAAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCACACTTTTTATCT dedD 2491774 - 2491100 - | hypothetical protein folC 2493032 - 2491764 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 3224 2493008 - 2492984 - G 70 -5.5 -4.38927 | TTTCCAGATAAGAAA GCCACGAGGCC AGG GGCGACGCAGC TTGAGGTATAGATTT TERM 3225 2493094 - 2493062 - R 100 -17.1 -3.06515 | opp_overlap 2493067, overlap 2493067 CTTTACGGTGAAAAG CAAAAGGGCAGAGCC TGC GGCCCTGCCCTTTTC AGTTATCAGGCCTCA TERM 3226 2493067 - 2493089 + r 100 -14.8 -4.3208 | opp_overlap 2493067 2493062 CGGTGAAAAGCAAAA GGGCAGAGCC TGC GGCCCTGCCC TTTTCAGTTATCAGG TERM 3227 2493089 - 2493067 - R 100 -17 -4.67038 | opp_overlap 2493067, overlap 2493062 CGGTGAAAAGCAAAA GGGCAGAGCC TGC GGCCCTGCCC TTTTCAGTTATCAGG accD 2494014 - 2493100 - | acetyl-CoA carboxylase subunit beta TERM 3228 2494152 - 2494140 - R 77 -3.3 -5.24531 | opp_overlap 2494140 ACTTTGGATAAAAAA GTGGT CGA ACCGC TGAGTTACTTTCTAT dedA 2494823 - 2494164 - | hypothetical protein truA 2495684 - 2494872 - | tRNA pseudouridine synthase A usg 2496697 - 2495684 - | putative semialdehyde dehydrogenase TERM 3229 2496752 - 2496723 - R 86 -11.5 -3.80279 | gap 1, opp_overlap 2496723 TCCAGAAATACATAA GCGTCCCTGTCGCA TTA TTCGACAGGGA-GC ATTAAGAGGACATTA pdxB 2498015 - 2496765 - | erythronate-4-phosphate dehydrogenase TERM 3230 2498222 - 2498199 - g 90 -5.9 -5.24129 | overlap 2498203 TCTGGGGATAAAAAA TGACGCGCC GCTACT GTCGCGCCA CTTCCCCGCCGCTGA TERM 3231 2498965 - 2498986 + G 70 -5.1 -4.45517 | GGCCTGTTGTTTATC GCGCTAATA ATTG TACTGGCGC TTTTCTGGCTGGTTT flk 2498089 - 2499006 + | flagella biosynthesis regulator yfcJ 2500181 - 2499003 - | hypothetical protein TERM 3232 2499173 - 2499194 + g 95 -14.5 -3.6682 | opp_overlap 2499187 CGCCGAGCGCCGTAC CGCGTACCT GAGA AGGTACGCG TTTCACTACCTCCAC TERM 3233 2499714 - 2499678 - G 71 -10.7 -3.22298 | GCTATGGATCAGCAA GCCCAACGGCGCACCGG CCG CCAGCGCGCCGTAAATC GCCATTCCGTTCCAC SC2375 2500735 - 2500361 - | putative cytoplasmic protein TERM 3234 2500759 - 2500774 + H 70 -4.8 -4.40561 | overlap 2500756 TTCCTTTCCCCTGAT GAAATA AAAA TATTTC TTCTTTTTCGCGAAA TERM 3235 2500828 - 2500840 + H 80 -6.3 -4.84359 | opp_overlap 2500828, overlap 2500817 TCTCAGAGTGAAAAA GAAAG TAA CTTTC TTTTTCTCGCGCTAA TERM 3236 2500840 - 2500828 - H 78 -6.3 -4.70659 | opp_overlap 2500817 2500828 TCTCAGAGTGAAAAA GAAAG TAA CTTTC TTTTTCTCGCGCTAA TERM 3237 2500884 - 2500871 - H 72 -5.3 -4.62069 | TTTTTACCTTAAAAA TATCG GTGC CGATA ACACATCTTCTTAGG TERM 3238 2500932 - 2500921 - g 83 -5.8 -4.90013 | GAATGGAACCAAAAA GCCA AGAC TGGC ATCGTGCAGATATTA ner 2500908 - 2501156 + | putatiave helix-turn-helix regulatory protein SC2377 2501325 - 2501693 + | hypothetical protein TERM 3239 2502055 - 2502017 - g 76 -5.3 -4.82901 | gap 1, opp_overlap 2502049, overlap 2501993 CTCGGCGGAGAAAAA GTGGATGTTCTGTTGGCT ACAG AGTCAAC-GCCCATCCAC CTGGAAGTTTATACC SC2378 2501693 - 2502211 + | putative periplasmic protein yprA 2502934 - 2502278 - | putative inner membrane protein TERM 3240 2502708 - 2502696 - G 84 -2.7 -5.40474 | AGCGCCGGAAAAAAA CATTC CAC AAATG ATAAGCGGACCAATG TERM 3241 2502997 - 2502978 - R 100 -13.6 -5.26875 | opp_overlap 2502978 CCCTGAATGAAAAAA CAGGTCGC ATTA GCGACCTG TTTCATTATTGATAC TERM 3242 2502978 - 2502997 + r 100 -13.6 -4.09805 | opp_overlap 2502978 CCCTGAATGAAAAAA CAGGTCGC ATTA GCGACCTG TTTCATTATTGATAC fabB 2504246 - 2503032 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 3243 2504510 - 2504526 + G 74 -2.1 -5.06414 | TAATGACAATGGACT CGAAGAG ACA CGCTACG TTTTTCTTGGCGGCA TERM 3244 2506214 - 2506198 - g 72 -3.5 -4.78237 | opp_overlap 2506205 TAGCCGATAACAAAA CGTCGGC GGC GCCTGCG CCTGTGTATCCGGGT mnmC 2504406 - 2506406 + | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 3245 2506448 - 2506421 - T 75 -11.2 -3.08798 | opp_overlap 2506414 2506447 ATGGGTCAGTCAATA GCGGAAGGCGGC AAGC GTCGCCTTCCGG CCCACGGCGTTATTG yfcL 2506733 - 2506458 - | hypothetical protein yfcM 2507314 - 2506766 - | putative cytoplasmic protein yfcA 2508123 - 2507314 - | hypothetical protein TERM 3246 2507638 - 2507614 - G 80 -9.9 -3.94381 | overlap 2507629 2507630 2507632 ACATAAGGTGACAAA CGCCAGAGCGT AAA ACGACCCGGCG GCAGGCCCGAAAAAG mepA 2508947 - 2508123 - | penicillin-insensitive murein endopeptidase TERM 3247 2508924 - 2508937 + g 100 -3.7 -5.77856 | GACAAACCATGCCAG CAGCG CAAT CGCGG TTTTTTTCATTTCTT aroC 2510036 - 2508951 - | chorismate synthase yfcB 2511004 - 2510072 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 3248 2510147 - 2510137 - G 74 -2.4 -5.0916 | TGGTCAACATAAAAA CGCC ATC GCCG CCGTTGTCAAACTCC TERM 3249 2511197 - 2511183 - H 85 -5.6 -5.34655 | overlap 2511185 GAATGAAAAAGAAAA CATCGC TCA GCGAGG AGGACCAGGCGCTGT TERM 3250 2511195 - 2511185 - H 74 -6.8 -4.26857 | overlap 2511183 ATGAAAAAGAAAACA TCGC TCA GCGA GGAGGACCAGGCGCT yfcN 2511224 - 2511721 + | hypothetical protein sixA 2512306 - 2511821 - | phosphohistidine phosphatase fadJ 2514662 - 2512515 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3251 2512865 - 2512877 + g 93 -4.8 -5.46698 | opp_overlap 2512865 TAAGCTTATAAATAG CAGG GTCAA CCTG TTTTTTGCTTTTACG TERM 3252 2513211 - 2513225 + g 91 -7.8 -5.01732 | ATCACTGACGACTAT CGGGGT TTT ACCCTG TTTTTTCGCCAGCTT TERM 3253 2513743 - 2513771 + g 80 -4.3 -5.10029 | overlap 2513746 CCCACGCTGTTCAGC GGGCCGGGCGGCG CAT CGCTACCGGGATC TTTTTTCACCTTGGT TERM 3254 2513815 - 2513801 - G 74 -3.4 -4.87803 | overlap 2513803 TACTGGCAAAGAAAA TAGCGC GCA GCGCCT GCGATTGAGGCGTCA TERM 3255 2513813 - 2513803 - G 74 -8.2 -4.05678 | overlap 2513801 CTGGCAAAGAAAATA GCGC GCA GCGC CTGCGATTGAGGCGT TERM 3256 2513925 - 2513944 + g 76 -3.4 -5.02476 | overlap 2513920 AATGATCCGCTCCGT CGCCGGAT AATT ACCCTGCG TTTTTTGCGCCGTCT fadI 2515972 - 2514662 - | 3-ketoacyl-CoA thiolase TERM 3257 2515142 - 2515129 - G 76 -9.5 -3.84406 | opp_overlap 2515138 CGGTCATCAGAATAA CGGCG GCAG CGCCG TCGGTCAGCGGTGTA TERM 3258 2516139 - 2516103 - R 100 -9.4 -5.75599 | overlap 2516108 GAAACGACAAAAAAA GAAAACGCCTCCGCCA GATGA TGACGGAGGCGTCGTG AATGAACGGATTAAC TERM 3259 2516134 - 2516108 - R 100 -15.9 -5.61277 | overlap 2516103 GACAAAAAAAGAAAA CGCCTCCGCCA GATGA TGACGGAGGCG TCGTGAATGAACGGA yfcZ 2516458 - 2516150 - | hypothetical protein TERM 3260 2517405 - 2517390 - g 72 -11.8 -2.68823 | overlap 2517389 GTCGCGGCACAGAAT CCGGCG CTGG CGCCGG TCGCGGGTCAGATTC fadL 2516799 - 2518112 + | long-chain fatty acid outer membrane transporter TERM 3261 2518131 - 2518161 + T 86 -11.3 -3.78351 | opp_overlap 2518137, overlap 2518137 CTTTCTGAGACGGAT CAAAAAGGTGAGC ATTGC GCTCACCTTTTTA TTTACTACCGTTTAT TERM 3262 2518155 - 2518137 - T 100 -11 -4.76041 | opp_overlap 2518137 2518131 GAGACGGATCAAAAA GGTGAGCA TTG CGCTCACC TTTTTATTTACTACC TERM 3263 2518137 - 2518155 + T 100 -10.3 -5.33405 | opp_overlap 2518137, overlap 2518131 GAGACGGATCAAAAA GGTGAGC ATTGC GCTCACC TTTTTATTTACTACC vacJ 2518928 - 2518173 - | lipoprotein precursor TERM 3264 2518202 - 2518224 + g 71 -6.3 -4.2679 | gap 1 TCTCTTTGAGTTCAT CCTGAATCGC CTGC GCG-TTCGGG TTTTCCTGCGGCTTG yfdC 2519217 - 2520158 + | hypothetical protein TERM 3265 2520226 - 2520214 - T 81 -3.3 -5.4505 | CCGGCGAATAAAAAA CGCTA TAC TGGCG CCGCGTTGTCCCCTT TERM 3266 2520454 - 2520423 - T 84 -8.7 -4.72986 | overlap 2520425 TACGTTCAGCAAAAA GTCGTCATCGGCC GGTTAT GACCGATGACATC CCGATGTGGTCTAGA pgtE 2521403 - 2520465 - | outer membrane protease pgtA 2522759 - 2521671 - | phosphoglycerate transport activator TERM 3267 2522587 - 2522600 + g 73 -5.2 -4.57073 | AATATCAACAGCTTG CCCG GATCGA CGGG TTTTTGCAGAAAATC pgtB 2524914 - 2522908 - | phosphoglycerate transporter TERM 3268 2524001 - 2524032 + g 78 -6.5 -4.56597 | gap 1, opp_overlap 2523988 AAGCGCCCTAGCGTA GCCTCTCTGG-CGC GGCTG GCGTCCAGTAAGGC TTTTTGCGCCGCAAC pgtC 2526221 - 2524911 - | phosphoglycerate transporter TERM 3269 2527044 - 2527066 + G 74 -7.6 -4.1964 | overlap 2527035 GTTGGCGGCGGGATC GTCGCGCCTA TCG TCGGTGCGGC TTTTGCGATATTGGG pgtP 2526540 - 2527931 + | phosphoglycerate transporter TERM 3270 2527958 - 2527976 + T 93 -16 -3.11072 | opp_overlap 2527958 TCCTGGGGAACAGAA GCGCCGAC ATT GTCGGCGC TATCTATTCACTGGC TERM 3271 2527976 - 2527958 - T 100 -16 -3.65812 | opp_overlap 2527958 TCCTGGGGAACAGAA GCGCCGAC ATT GTCGGCGC TATCTATTCACTGGC yfdY 2528449 - 2528207 - | hypothetical protein ddg 2528971 - 2529888 + | lipid A biosynthesis palmitoleoyl acyltransferase yis2 2530572 - 2529889 - | putative integrase protein TERM 3272 2529921 - 2529957 + g 100 -16.1 -3.54741 | opp_overlap 2529928, overlap 2529923 2529928 TGACAGTTTTTTGTC TGTAAAACGCCTGATGA ACA TCATCGGGCGTTTTGTA TTTCAGGGCCTGGTG TERM 3273 2529923 - 2529955 + g 100 -16.5 -3.35046 | opp_overlap 2529928, overlap 2529921 2529928 ACAGTTTTTTGTCTG TAAAACGCCTGATGA ACA TCATCGGGCGTTTTG TATTTCAGGGCCTGG TERM 3274 2529928 - 2529950 + g 100 -14.2 -4.78848 | opp_overlap 2529928, overlap 2529923 2529921 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG TERM 3275 2529950 - 2529928 - G 91 -12 -4.07568 | opp_overlap 2529923 2529921 2529928 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG SC2404 2531144 - 2530743 - | putative cytoplasmic protein TERM 3276 2531206 - 2531227 + r 74 -7.3 -4.24002 | opp_overlap 2531211, overlap 2531211 2531226 CGGGTCATACATCTG AAAAAGGCC GCAA GGCCTTTTA TTTTGGCATTTCGCA TERM 3277 2531222 - 2531211 - R 80 -7.2 -4.65838 | opp_overlap 2531206 2531211 CATACATCTGAAAAA GGCC GCAA GGCC TTTTATTTTGGCATT TERM 3278 2531211 - 2531222 + r 87 -7.2 -5.10163 | opp_overlap 2531211, overlap 2531206 CATACATCTGAAAAA GGCC GCAA GGCC TTTTATTTTGGCATT TERM 3279 2531294 - 2531311 + r 82 -5.5 -5.24989 | opp_overlap 2531294 2531293 GCTTTTAGCGATAAG TCCCCTG TTTA CAGGCGA TTTTTTACTGTGTCG TERM 3280 2531696 - 2531725 + r 86 -9.3 -4.4767 | opp_overlap 2531701, overlap 2531701 AAGTACAATGCAAAG AAAAACAGGAGCC ATGG GGCTCCTGTTTGC TTTTCTACTCCGTGC TERM 3281 2531720 - 2531701 - R 100 -13.6 -5.33026 | opp_overlap 2531696 2531701 CAATGCAAAGAAAAA CAGGAGCC ATGG GGCTCCTG TTTGCTTTTCTACTC TERM 3282 2531701 - 2531720 + r 100 -13.6 -4.28487 | opp_overlap 2531701, overlap 2531696 CAATGCAAAGAAAAA CAGGAGCC ATGG GGCTCCTG TTTGCTTTTCTACTC yfdZ 2532968 - 2531730 - | aminotransferase TERM 3283 2532749 - 2532736 - G 71 -9.5 -3.53091 | overlap 2532722 ATCGCGCGGCGTAAA CGCGG TATG CCGCG GGACGTGGAATAACC TERM 3284 2533582 - 2533566 - R 100 -13.7 -5.64006 | opp_overlap 2533566 AGGCAATGAAAAAAA CCGCGTG AGG CACGCGG TTTGAGACTGACAAG TERM 3285 2533566 - 2533582 + r 93 -13.7 -3.57144 | opp_overlap 2533566 AGGCAATGAAAAAAA CCGCGTG AGG CACGCGG TTTGAGACTGACAAG TERM 3286 2533625 - 2533672 + r 74 -8.5 -3.86524 | gap 1, overlap 2533624 TGCCTGATGACGCTG CGC-TCATCAGGCCTACAGATG ACACA CTTTTGTAGGCCGGATAAGGCG TTTATGCCACCATCT glk 2534656 - 2533691 - | glucokinase TERM 3287 2534611 - 2534561 - G 76 -11.8 -3.03243 | opp_overlap 2534546, overlap 2534551 2534610 ATCCAGGCCGGAATA CGTTTTGGCCTGCGAGATTTCTCC ACT GGCGATATCACACAGGGCAAGACG CGCATTCGTGCCGCC TERM 3288 2535812 - 2535784 - g 71 -9.6 -3.53444 | gap 1, opp_overlap 2535792 TTAGCCGTCGTCAAA CTCGCCG-CGC TGGTCATC GCGGCGGCGAG CGGCTTTCGCGGCGG yfeO 2534860 - 2536095 + | hypothetical protein dciP 2537767 - 2536115 - | putative thiamine pyrophosphate enzyme TERM 3289 2536605 - 2536573 - G 88 -13.4 -3.40403 | overlap 2536591 2536595 GCGGCTGTACCACAA CTTCCGCGCCGTCA GGAAG CGACAGCGCGGCAG CGCCAAAGGCGGCGG TERM 3290 2537411 - 2537394 - G 74 -3.4 -4.85599 | opp_overlap 2537406, overlap 2537395 2537404 CTCATGCGATAAAAA TGACGA AAATCG CCGTCA CCGAGGGTGTGGTGC TERM 3291 2537895 - 2537883 - H 70 -4.7 -4.49756 | CGGCAAACAGTAAAA GCCGG ATA CCGCC TGGCGAGTGTAACCG yghZ 2537947 - 2538945 + | putative oxidoreductase ypeC 2539059 - 2539385 + | hypothetical protein TERM 3292 2539431 - 2539402 - T 72 -9.4 -3.61398 | opp_overlap 2539402 2539399 2539397 2539403, overlap 2539404 CCTCCTGCTGAATAA CA-GCCCGATGACG CCCA CG-CATCGGGCCTG CTATCTTTCTGTCTT TERM 3293 2539428 - 2539404 - T 85 -12.2 -3.38812 | gap 1, opp_overlap 2539403 2539402 2539399 2539397, overlap 2539402 TCCTGCTGAATAACA GCCCGATGACG CCCA CG-CATCGGGC CTGCTATCTTTCTGT mntH 2540687 - 2539446 - | manganese transport protein MntH TERM 3294 2539920 - 2539908 - G 86 -10.5 -4.19735 | GCCGCTAAAATGAAA CGCCG CCG CGGCG GTCGCCATCATTGCC TERM 3295 2540215 - 2540204 - G 72 -3.6 -4.82901 | CGGCGGCGACAAAAA GCAG TAAA CCGC CGATGACTTTTTCAA TERM 3296 2540718 - 2540703 - H 82 -7.6 -4.56597 | opp_overlap 2540703 CTTTTGCCTCAAAAA CATAGC CTTT GCTATG TTTCATGCTATGCTT TERM 3297 2541623 - 2541644 + G 74 -7.3 -4.12397 | TGTGGTCGCAGCGCT GGTTCTGAA CATG TTCAGTACC TTTATCGTTCTGTCG nupC 2541030 - 2542232 + | NUP family nucleoside transport TERM 3298 2542270 - 2542253 - T 95 -12.7 -3.97368 | opp_overlap 2542253 CGTTTAATGTAGAAA CCGGGGA GCTA TCCCCGG TTTTTTTATGCCGCT TERM 3299 2542253 - 2542270 + T 100 -12.7 -5.61596 | opp_overlap 2542253 CGTTTAATGTAGAAA CCGGGGA GCTA TCCCCGG TTTTTTTATGCCGCT yfeA 2544474 - 2542285 - | diguanylate cyclase/phosphodiesterase domain-containing protein TERM 3300 2542504 - 2542515 + g 74 -7.2 -4.15106 | GATTTTAATGATGTC CGCC TTGA GGCG TTTTAGCCGTTCATA TERM 3301 2542987 - 2542962 - G 73 -5.4 -4.60797 | gap 1, overlap 2542963 2542965 GTTGCACATACAAAA CCAGCGCGCCG CGCTC CAGCGC-CTGA CGGATTTTCTGCAAC TERM 3302 2544655 - 2544636 - H 100 -11.4 -5.2197 | opp_overlap 2544636 GACAAAAAGCAAAAA CCCCCGCT TTTC AGCGAGGG TTTGAATGTTGGTGG TERM 3303 2544636 - 2544655 + H 76 -9.2 -3.77831 | opp_overlap 2544636 GACAAAAAGCAAAAA CCCCCGCT TTTC AGCGAGGG TTTGAATGTTGGTGG yfeC 2545080 - 2545442 + | putative negative regulator yfeD 2545444 - 2545836 + | putative negative regulator TERM 3304 2545875 - 2545841 - T 95 -11.6 -4.2461 | opp_overlap 2545844 2545848, overlap 2545844 2545848 AGGCGGACTAACAAA TAATAAACGGCAGG CGTCTGC CCTGCCGTTTATTC TATTTCAGCTGGCGT TERM 3305 2545844 - 2545872 + T 95 -13.3 -3.82946 | opp_overlap 2545841 2545844 2545848, overlap 2545848 CGGACTAACAAATAA TAAACGGCAGG CGTCTGC CCTGCCGTTTA TTCTATTTCAGCTGG TERM 3306 2545872 - 2545844 - T 95 -13.3 -4.24413 | opp_overlap 2545844 2545848, overlap 2545841 2545848 CGGACTAACAAATAA TAAACGGCAGG CGTCTGC CCTGCCGTTTA TTCTATTTCAGCTGG TERM 3307 2545848 - 2545868 + T 90 -9.7 -4.52143 | opp_overlap 2545844 2545841 2545848, overlap 2545844 CTAACAAATAATAAA CGGCAGG CGTCTGC CCTGCCG TTTATTCTATTTCAG TERM 3308 2545868 - 2545848 - T 93 -9.7 -4.67968 | opp_overlap 2545848 2545844, overlap 2545844 2545841 CTAACAAATAATAAA CGGCAGG CGTCTGC CCTGCCG TTTATTCTATTTCAG gltX 2547305 - 2545890 - | glutamyl-tRNA synthetase TERM 3309 2546154 - 2546171 + g 80 -4.7 -5.0133 | TTCCAGCGGCTGACG CGCCACC GGGC GGAGGTG TTTTTTCGCCGCATC TERM 3310 2547843 - 2547873 + r 93 -16.3 -2.94194 | opp_overlap 2547843 2547850, overlap 2547850 GCACGACCCACCAAT GTAAAAAGGCGCC CTAAA GGCGCCTTTTTGC TATCTGCGATTTATA TERM 3311 2547873 - 2547843 - R 86 -14.8 -2.51464 | opp_overlap 2547843 2547850, overlap 2547850 GCACGACCCACCAAT GTAAAAAGGCGCCC TAA AGGCGCCTTTTTGC TATCTGCGATTTATA TERM 3312 2547866 - 2547850 - R 100 -11.5 -4.7629 | opp_overlap 2547850 2547843, overlap 2547843 CCACCAATGTAAAAA GGCGCCC TAA AGGCGCC TTTTTGCTATCTGCG TERM 3313 2547850 - 2547866 + r 100 -10.8 -4.84527 | opp_overlap 2547843 2547850, overlap 2547843 CCACCAATGTAAAAA GGCGCC CTAAA GGCGCC TTTTTGCTATCTGCG TERM 3314 2547916 - 2547890 - R 70 -9.4 -3.35798 | opp_overlap 2547890 2547892 2547903, overlap 2547893 ATCTGCGATTTATAA GATTCGAACCTG CCG CAGGTTCGGGTC TTGCCTGATGCGCTG TERM 3315 2547890 - 2547916 + r 85 -13.8 -3.09834 | opp_overlap 2547890 2547893, overlap 2547892 2547903 ATCTGCGATTTATAA GATTCGAACCTG CCG CAGGTTCGGGTC TTGCCTGATGCGCTG TERM 3316 2547892 - 2547914 + r 73 -10.6 -3.10796 | opp_overlap 2547890 2547893, overlap 2547890 2547903 CTGCGATTTATAAGA TTCGAACCTG CCG CAGGTTCGGG TCTTGCCTGATGCGC xapR 2548879 - 2547995 - | DNA-binding transcriptional activator XapR TERM 3317 2548810 - 2548785 - G 75 -11.9 -2.87564 | opp_overlap 2548778, overlap 2548790 GGAGGTTGTGACATA TTTAACCGGGC AGCA GCCCGGCCAAA ATGCAATTCTTCTGC TERM 3318 2548805 - 2548790 - G 76 -11.8 -3.15999 | opp_overlap 2548778, overlap 2548785 TTGTGACATATTTAA CCGGGC AGCA GCCCGG CCAAAATGCAATTCT SC2418 2549089 - 2548931 - | hypothetical protein TERM 3319 2549141 - 2549112 - R 88 -8.6 -4.82901 | overlap 2549114 CCTTGTTCATAAAAA TGGACTGGCGAA CATCCT CTCGCCAGTCAA ATAAAATTAATGTGC TERM 3320 2549139 - 2549114 - R 73 -11.2 -2.6933 | overlap 2549112 TTGTTCATAAAAATG GACTGGCGAA CATCCT CTCGCCAGTC AAATAAAATTAATGT xapB 2550404 - 2549148 - | major facilitator superfamily xanthosine permease TERM 3321 2550444 - 2550430 - R 79 -9.2 -4.03234 | TTGCCGTGAGATAAA GCCCCA ATA CGGGGC CGTAGTCATTGTGTT xapA 2551292 - 2550459 - | purine nucleoside phosphorylase TERM 3322 2551216 - 2551206 - G 87 -8.2 -4.67048 | GGAGCCTAAAATAAA CGCG ACT CGCG GGGTAAATGCCGGTT yfeN 2551548 - 2552309 + | hypothetical protein TERM 3323 2552339 - 2552314 - T 70 -9.7 -3.06815 | ACCTGTTTTAACACA CTGCCCTGTCA AAAA TGGCAGGGCAA GACCGCACCTCACAC yfeR 2553297 - 2552371 - | LysR family transcriptional regulator TERM 3324 2553502 - 2553521 + G 79 -2.8 -5.28176 | overlap 2553504 TTGAAGGCATTACGA CAGCGG CCATCGCT CTGCTG TTTTTTATGCATGGC TERM 3325 2553777 - 2553807 + G 81 -8.3 -4.34402 | gap 1 GTCGCGGCCGCGGTG TGCTCAGC-GTCTG CGTC CAGTCTGCTGGGCA TTTTCCTGTCGCCGC TERM 3326 2554230 - 2554201 - g 86 -4.1 -5.40072 | opp_overlap 2554203 2554204, overlap 2554202 2554203 GCGGTTCGAAAAAAA GCCTGGCCAACGG GATC CCGATGGCCAATA TTCTGTTTCCGACGT TERM 3327 2554228 - 2554203 - g 71 -11.1 -2.89655 | opp_overlap 2554203 2554204, overlap 2554202 2554201 GGTTCGAAAAAAAGC CTGGCCAACGG GATC CCGATGGCCAA TATTCTGTTTCCGAC TERM 3328 2554204 - 2554227 + G 72 -12.4 -2.69057 | opp_overlap 2554203 2554202 2554201, overlap 2554203 GTTCGAAAAAAAGCC TGGCCAACGG GATC CCGATGGCCA ATATTCTGTTTCCGA yfeH 2553387 - 2554385 + | hypothetical protein ypeB 2554600 - 2554382 - | hypothetical protein ligA 2556617 - 2554602 - | NAD-dependent DNA ligase LigA TERM 3329 2555705 - 2555682 - G 71 -8.1 -3.87551 | gap 1, opp_overlap 2555703 AGCAGGAAATTTAAA CGC-CACCGC CCAGC GCGGCGCGCG GGCCACAAAGCCCAG TERM 3330 2556641 - 2556657 + r 74 -10.8 -3.17901 | opp_overlap 2556641, overlap 2556654 ATCAATGATAAAAAA CCCCCG ACAGG CGGGGG TTACGTTAAAAATGT TERM 3331 2556657 - 2556641 - R 100 -10.8 -5.38249 | opp_overlap 2556641 2556654 ATCAATGATAAAAAA CCCCCG ACAGG CGGGGG TTACGTTAAAAATGT zipA 2557714 - 2556689 - | cell division protein ZipA TERM 3332 2558396 - 2558420 + G 80 -4.9 -5.06414 | opp_overlap 2558402 TATTCCTGGCATTGG CCAAACCATCG CGC CGGTGCTGTGG TTTTTGTTCAGCGCC cysZ 2557908 - 2558669 + | putative sulfate transport protein CysZ cysK 2558981 - 2559952 + | cysteine synthase A TERM 3333 2559981 - 2559996 + F 87 -6.8 -5.26316 | opp_overlap 2559981 2559972 AAAACGCGTAAAAAA GCACCT TTTT GGGTGC TTTTTTGTGGCCTGC TERM 3334 2559996 - 2559981 - f 83 -6.1 -5.08011 | opp_overlap 2559981, overlap 2559972 AAAACGCGTAAAAAA GCACC TTTTTG GGTGC TTTTTTGTGGCCTGC pthP 2560336 - 2560593 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) ptsI 2560642 - 2562369 + | phosphoenolpyruvate-protein phosphotransferase crr 2562410 - 2562919 + | glucose-specific PTS system component TERM 3335 2562956 - 2562939 - T 93 -12.7 -3.67597 | opp_overlap 2562939 TGCCGCAGTGAAGAA TGGCGCC TTTG GGCGCCA TTTTTTTTGCCTGTA TERM 3336 2562939 - 2562956 + T 100 -12.7 -5.83822 | opp_overlap 2562939 TGCCGCAGTGAAGAA TGGCGCC TTTG GGCGCCA TTTTTTTTGCCTGTA SC2432 2563308 - 2563069 - | hypothetical protein pdxK 2564171 - 2563305 - | pyridoxal kinase TERM 3337 2564730 - 2564774 + G 74 -2 -5.02476 | gap 1, overlap 2564733 TGAAAGACTGCTTTG CGCGCATCTGCTGCCG-GGCG ACAG CGTCGCGGTGGAAGATCCCTG TTTTTTAAGCAGTAT ptsJ 2564254 - 2565546 + | GntR family transcriptional regulator yfeJ 2565561 - 2566280 + | glutamine amidotransferase yfeK 2566249 - 2566719 + | hypothetical protein SC2438 2567383 - 2567177 - | hypothetical protein yfeL 2566732 - 2567271 + | putative membrane carboxypeptidase (penicillin-binding protein) cysM 2568313 - 2567402 - | cysteine synthase B TERM 3338 2568274 - 2568294 + g 85 -8.9 -4.38273 | GACGTTGTAATTTGA CCAGCGGCG TAT TGCCGATGG TTTGTTCTAATGTAT TERM 3339 2568358 - 2568333 - R 100 -13.3 -5.02074 | gap 1 TCAGCTCGTAAAAAA GCCCGGTATGCG TAG CGC-CACCGGGC GATAACTATACAAAT cysA 2569478 - 2568381 - | sulfate/thiosulfate transporter subunit TERM 3340 2568495 - 2568475 - G 72 -4 -4.68209 | gap 2 AGTCCAACAAACAAA CGCTCGCCGC GCT GCGG-GA-CG TCGTCACCCGCCATC TERM 3341 2569038 - 2569052 + g 100 -11.4 -4.82901 | overlap 2569031 GGCAAGCGCGCGCGC CAGCGC CAC GCGCTG TTTTTGTCCGCCGGA TERM 3342 2569278 - 2569249 - G 70 -3.4 -4.78848 | TGCTGAAACACAAAA CCGACTTTACGC TCACGC GCGTGCAGACGG CTAACGTCCGTACCG cysW 2570343 - 2569468 - | sulfate/thiosulfate transporter permease subunit cysU 2571176 - 2570343 - | sulfate/thiosulfate transporter subunit cysP 2572192 - 2571176 - | thiosulfate transporter subunit TERM 3343 2572339 - 2572312 - R 100 -14.2 -3.84992 | gap 1, overlap 2572299 2572313 AAGGGAATAAGAGAA TC-CCTCCCCACG CGG CGCGGGGAGGAGA CCGGCATCAATCAGA TERM 3344 2572337 - 2572313 - R 93 -15.7 -2.8991 | overlap 2572299 2572312 AGGGAATAAGAGAAT CCCTCCCCACG CGG CGCGGGGAGGA GACCGGCATCAATCA ucpA 2573141 - 2572350 - | short chain dehydrogenase TERM 3345 2573276 - 2573259 - R 100 -12.7 -5.48825 | opp_overlap 2573255 TATTAGGTAAAAAAA TCCCCGC GGAG GCGGGGA TGGGCATTTTCATGC yfeX 2574288 - 2573389 - | hypothetical protein TERM 3346 2574202 - 2574216 + g 74 -7 -4.29845 | GCTGGCCGCGCGCAG GGCGTC CAG GTCGCC TTTTACATTGGCTTC TERM 3347 2574310 - 2574327 + r 77 -11.3 -3.15427 | opp_overlap 2574310 TCCTGAAAATGAGAA TGCCACG CAGT CGTGGCA TTAATGGAGGCTATT TERM 3348 2574327 - 2574310 - R 86 -11.3 -3.68359 | opp_overlap 2574310 TCCTGAAAATGAGAA TGCCACG CAGT CGTGGCA TTAATGGAGGCTATT yfeY 2574958 - 2574383 - | hypothetical protein TERM 3349 2574798 - 2574826 + g 87 -13.8 -3.19389 | GCCGGCTCTTCCAGC GGCGTGGCGGCG GTCAG CGCTCCCACGCC TTGCTCAGTGACTTC yfeZ 2575469 - 2575020 - | hypothetical protein ypeA 2575881 - 2575456 - | putative acetyltransferase TERM 3350 2576268 - 2576251 - g 91 -2.5 -5.79588 | CCAAAACCAAAAAAA CCGGCAG TAAA CGGCTGG TGATGCTCGACCCCG TERM 3351 2576512 - 2576532 + G 81 -6.8 -4.70879 | opp_overlap 2576510 2576518 ATGGTTTTACCAACC CGAAAGCG GCAGG CGCTTCCG TTTTTGCGCTTTCCA TERM 3352 2576895 - 2576884 - g 71 -5.8 -4.36914 | CGTTTCGCCAGAAAA TCGC TACG GCGA TCGCCAACGGCATCA amiA 2576094 - 2576963 + | N-acetylmuramoyl-l-alanine amidase I TERM 3353 2577324 - 2577314 - g 71 -4.6 -4.58395 | opp_overlap 2577314 TTTATTGCCGAAAAA CCGG GCG CCGA TCCGGTATGGTGGTT hemF 2576966 - 2577865 + | coproporphyrinogen III oxidase ypfK 2577886 - 2578215 + | putative inner membrane protein TERM 3354 2578266 - 2578241 - T 75 -6.2 -4.55295 | opp_overlap 2578227 2578240 GCTCGTAGAAATAAA CGAGTTCATT GTAGAT AAAGAACTCG GTAATTCGCATTCTG SC2452 2578629 - 2578351 - | hypothetical protein eutR 2579715 - 2578663 - | transcriptional regulator EutR eutL 2580929 - 2580270 - | putative carboxysome structural protein, ethanolamine utilization TERM 3355 2581245 - 2581227 - R 77 -8.8 -3.91144 | opp_overlap 2581231 2581231 2581232, overlap 2581230 2581231 GCCATAGCGCACAAA GAACGGCG TGC CGACGTTC AGCCCGGCCTGCTTC eutB 2583214 - 2581853 - | ethanolamine ammonia-lyase, heavy chain TERM 3356 2583582 - 2583550 - R 78 -12.8 -2.55351 | gap 1, overlap 2583549 2583558 2583559 CGGGTCGAGATCAAG CTGGAGAAGCGCCTG CCGC CAGGCG-TTCACCAG ATCGGCGTCATCCTG TERM 3357 2583574 - 2583559 - R 71 -10.4 -2.59921 | overlap 2583558 2583550 2583549 ATCAAGCTGGAGAAG CGCCTG CCGC CAGGCG TTCACCAGATCGGCG TERM 3358 2584294 - 2584282 - R 77 -9.1 -3.96148 | GCTGGCGACCACAAA GTCGC CCA GCGAC TGCGAGAGCGCCATG eutH 2585852 - 2584626 - | hypothetical protein TERM 3359 2585651 - 2585618 - G 71 -8.1 -3.80174 | gap 1, overlap 2585632 ATACCGGGATAATAA CCGGCCCCAGTACATG CGC CA-GCACCGGCGCCAG CGCGGTCATACCGAC TERM 3360 2585835 - 2585817 - G 74 -7.5 -4.12857 | opp_overlap 2585817 2585816 2585819 AATCAGCATAAAGAA CATCATG ATGTA CATGATG ATTTCGTTAATTCCC eutG 2587159 - 2585972 - | paral putative transport protein in ethanolamine utilization TERM 3361 2587063 - 2587092 + g 70 -7.1 -4.11484 | gap 1 CGAGCGCCCCAAGTC CGCACAGCGTGACC GGC GGT-ACGCTGAACG TTTTCACCCGTTGCA eutJ 2587988 - 2587149 - | paral putative heatshock protein (Hsp70) TERM 3362 2587884 - 2587923 + g 76 -12.9 -2.70932 | opp_overlap 2587883 2587882 2587886, overlap 2587886 2587912 GCAGGTGCCCAAATC GACGCCCAGCC-ACAGCGG TGTA TCGCTGGCGGC-GGGCGTC TGGTTACACAGGGCC TERM 3363 2587912 - 2587943 + g 91 -10 -4.66953 | opp_overlap 2587886 2587883 2587882, overlap 2587886 2587884 AGCGGTGTATCGCTG GCGGCGGGCGTCTG GTTA CACAGGGCCGCCGC TTTTTGCAGTCTTGG eutE 2589402 - 2587999 - | putative aldehyde oxidoreductase in ethanolamine utilization TERM 3364 2589100 - 2589121 + g 83 -7.9 -4.60924 | opp_overlap 2589086 2589088 ACACTCGACGCCCGG CGTGCCGCG CGCC TGCGCCACG TTTTTAGCAAATTTA eutN 2589701 - 2589414 - | putative detox protein in ethanolamine utilization eutM 2590104 - 2589814 - | putative detox protein in ethanolamine utilization eutD 2591161 - 2590145 - | phosphotransacetylase TERM 3365 2590379 - 2590405 + g 73 -5.1 -4.56597 | gap 1, overlap 2590382 AATCATCACGTTGGC GCGGCCTTGCAG CGGG CTGTCAGGC-GC TTTTTGCGCGGCGAC TERM 3366 2590876 - 2590887 + g 81 -3.6 -5.24129 | overlap 2590873 TAAGCTTTTCCACTG CGTC CGGC GGCG TTTTTTCTCCGGCAC eutT 2591955 - 2591158 - | putative cobalamin adenosyltransferase, ethanolamine utilization TERM 3367 2591639 - 2591657 + g 75 -6.6 -4.37886 | overlap 2591613 2591640 CGAAAGCCGAGGCGC GGGTCGCT TTT GGCGACCA TTTTGTCCGCCGTCA eutQ 2592641 - 2591952 - | putative ethanolamine utilization protein eutP 2593107 - 2592619 - | putative ethanolamine utilization protein eutS 2593446 - 2593111 - | putative carboxysome structural protein, ethanol utilization TERM 3368 2593840 - 2593823 - R 100 -12.7 -5.60993 | overlap 2593834 CGGCGCATAAAAAAA GCGCAGG AGAA CCTGCGC CAGAAGAGAGAGTAA maeB 2596142 - 2593863 - | malic enzyme TERM 3369 2594297 - 2594277 - G 83 -10.4 -3.92324 | CGGCTCAATACCAAA GCGGCGAA CGGTT TCCGCCGC CATTACGGCGATCTC TERM 3370 2595281 - 2595313 + g 75 -6.2 -4.65078 | gap 1, opp_overlap 2595267 TTTCCGGTTCCGGGT TGGCCAGCGC-CAGA ATCA TTGGCGCGCGGGCCA TTTTCTTCACCATCT TERM 3371 2595486 - 2595504 + g 74 -7.4 -4.18018 | AACGCCCTTAGAGTC GCACACCA CGA TGTTGTGC TTTTGCATCCCCAAC TERM 3372 2595804 - 2595842 + g 74 -2.3 -5.00616 | overlap 2595805 TTTGTCCGGGTCAAG CTCATCGGCTTCAATGT CAAAC ACATCGATGCCGGCGAA TTTTTTAAACAGAAC SC2468 2596144 - 2596344 + | hypothetical protein talA 2596414 - 2597364 + | transaldolase A TERM 3373 2599365 - 2599355 - g 72 -2.4 -4.87273 | AATATTGTAGAAAAA GCCC GCC GGGT GCTGAACATCAAAGG tktB 2597384 - 2599384 + | transketolase TERM 3374 2599406 - 2599446 + T 82 -12 -3.40371 | opp_overlap 2599402 2599400 2599404 2599406, overlap 2599407 CGTTAGCAACACAGA CTTTGCGCAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA TTACTTCGTAGACTC TERM 3375 2599407 - 2599445 + T 90 -15.5 -2.63901 | opp_overlap 2599402 2599400 2599406 2599404, overlap 2599406 GTTAGCAACACAGAC TTTGCGCAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAA ATTACTTCGTAGACT SC2471 2599737 - 2599447 - | hypothetical protein ypfG 2600848 - 2599805 - | hypothetical protein TERM 3376 2600056 - 2600070 + g 100 -7 -5.47218 | opp_overlap 2600053, overlap 2600055 GCTGCAAACGTACGG CGCGCG AGG CGAGCG TTTTTTTGCGTGAAA TERM 3377 2600678 - 2600628 - G 86 -12.5 -3.64703 | gap 2, opp_overlap 2600628 2600627 TCGGGCGGAGCCAAA CCGCCGCGATCGATACGCAGTACCG CAT CGGTAC-GCGCCCCGG-CGCTGCGG CTTAATGTCATCACC TERM 3378 2600954 - 2600965 + r 95 -3 -5.81412 | opp_overlap 2600954 TCTTTTTTGTGTAAA GAAA TATA TTTC TTTTTTTTCAGTCCA yffH 2601548 - 2600973 - | hypothetical protein TERM 3379 2601927 - 2601903 - g 88 -11.5 -4.21922 | opp_overlap 2601903 2601901 GGATTCAAAATCAAA TTGATGCCGGA TAT CCCAGCATCAA TCTTCTGGTGATAAA yfeW 2601752 - 2603050 + | hypothetical protein TERM 3380 2603359 - 2603347 - T 72 -9.1 -3.5393 | ATCAGGCCTGTTAAA CGTCG ACC CGACG GGAAAATGTTTATCG aegA 2605466 - 2603499 - | putative oxidoreductase Fe-S binding subunit TERM 3381 2603839 - 2603829 - G 71 -4.6 -4.65895 | overlap 2603837 CCGCGTACGCAAAAA GCGA ATA CCGC TGGCGCGCCCGTGCG TERM 3382 2603898 - 2603916 + g 74 -4.5 -4.69464 | GTTAAATTCAAAGTT CGCGC CCTCTTCCC GCGCG TTTTTCACCTCTTTT TERM 3383 2605670 - 2605692 + H 91 -6.2 -5.48787 | opp_overlap 2605665 2605664 ACGGTTAAACGCCCG GTCTCGGCCA GTC TGGCTAAGGC TTTTTTCTATATTGT TERM 3384 2606734 - 2606705 - H 82 -7.9 -4.60889 | overlap 2606707 AATCAGGCGCAAAAA CACTTCCAGTAAC TTTT GTTAATGGAAGAG CGCGCGACGATTGCC TERM 3385 2606732 - 2606707 - H 77 -9.1 -3.91506 | overlap 2606705 TCAGGCGCAAAAACA CTTCCAGTAAC TTTT GTTAATGGAAG AGCGCGCGACGATTG TERM 3386 2607153 - 2607120 - H 86 -10.9 -3.66874 | opp_overlap 2607111 CCAACGCGAGCGAAA TCGCCGTGAGCTGCG TCAC CGCGCCTGACGGCGA TCATACCGTTTATAT TERM 3387 2607397 - 2607364 - H 72 -8.7 -3.74238 | opp_overlap 2607374, overlap 2607357 2607365 2607367 GTAAAGAACGGCAAA TCACCGGAAGGCCAG ATGT CAGGCTTTCCGGCGT TGGCACAAAAAGTAT TERM 3388 2607396 - 2607365 - H 79 -12.2 -2.8382 | opp_overlap 2607374, overlap 2607364 2607357 2607367 TAAAGAACGGCAAAT CACCGGAAGGCCAG ATGT CAGGCTTTCCGGCG TTGGCACAAAAAGTA TERM 3389 2607394 - 2607367 - H 75 -11.2 -2.95527 | opp_overlap 2607374, overlap 2607365 2607364 2607357 AAGAACGGCAAATCA CCGGAAGGCCAG ATGT CAGGCTTTCCGG CGTTGGCACAAAAAG TERM 3390 2609357 - 2609345 - g 75 -4.1 -4.9218 | CACCCATGAGAAAAA CAACA TTA TGTCG GTCTTCTCGACGGTC TERM 3391 2609750 - 2609736 - g 70 -5.6 -4.45945 | ATTGACCAACGAAAA GCGCAG GCG CTGGGC GTATCGATTGACGAT acrD 2607537 - 2610650 + | aminoglycoside/multidrug efflux system TERM 3392 2610686 - 2610716 + F 70 -9.1 -3.34962 | opp_overlap 2610691, overlap 2610691 GAGGTGTCGGGCACA AAAAAGGCGACTT TCGTT GAGTCGCCTTTTC TTATCCCCTATGGGA TERM 3393 2610691 - 2610711 + F 93 -9 -4.78237 | opp_overlap 2610691, overlap 2610686 GTCGGGCACAAAAAA GGCGACTT TCGTT GAGTCGCC TTTTCTTATCCCCTA TERM 3394 2610711 - 2610691 - f 100 -8.3 -5.24129 | opp_overlap 2610691 2610686 GTCGGGCACAAAAAA GGCGACT TTCGTTG AGTCGCC TTTTCTTATCCCCTA TERM 3395 2610738 - 2610750 + F 79 -7.7 -4.41348 | CCTATGGGAGCGCGG TGCCT TCC AGGCA TTTATTTACGAAGCA yffB 2611224 - 2611580 + | hypothetical protein TERM 3396 2611716 - 2611732 + G 73 -5.1 -4.59773 | ATTGAGCATATGGAT TTTGGCG ACA CGCAAAA TTTTTGGGCATGGCG TERM 3397 2612554 - 2612566 + G 85 -9.1 -4.38154 | overlap 2612540 TGACGACGGGCGGTA CGTCC GAC GGACG TTTTATCGCCCGTAT dapE 2611584 - 2612711 + | succinyl-diaminopimelate desuccinylase SC2479 2612739 - 2612939 + | hypothetical protein ypfI 2614984 - 2612966 - | hypothetical protein TERM 3398 2613488 - 2613461 - G 71 -7.7 -3.99324 | overlap 2613480 2613481 CCGTACCAGTACAAA GCCGCAGCGTT GCCAGA AACGCCACAGC TCCGGCGTATAGCCG TERM 3399 2614821 - 2614773 - G 81 -14.6 -2.55544 | gap 2, overlap 2614769 GCATGACGGAATTCA CGGCCCAGCAGCGTTTGTAACGCC TGT GGCG-TACAG-CGCAGCTGGGCGG GCGCGTCAGGCGAGA ypfJ 2615863 - 2615000 - | hypothetical protein TERM 3400 2615981 - 2615960 - R 74 -11.5 -2.90054 | overlap 2615955 GAGGAAAGGATGATA CCGGAGAGC GGTT GCCCCCCGG TCAGAAGCGGAATTA purC 2616707 - 2615994 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3401 2616874 - 2616855 - R 100 -11.4 -5.31275 | opp_overlap 2616855 2616853 TCTTATCAGAAAAAA GGGCCGGA TTAC TCCAGCCC TGTTAAATTACTTGT nlpB 2617916 - 2616882 - | lipoprotein dapA 2618811 - 2617933 - | dihydrodipicolinate synthase gcvR 2618958 - 2619530 + | glycine cleavage system transcriptional repressor bcp 2619530 - 2620000 + | thioredoxin-dependent thiol peroxidase grk 2621186 - 2620047 - | hypothetical protein SC2488 2622460 - 2621192 - | putative permease TERM 3402 2621342 - 2621330 - G 71 -4.7 -4.56597 | overlap 2621331 CGTCGCGTGGAAAAA GCTGC CGT GCGGC AGATGGTCCAGCACC TERM 3403 2621505 - 2621485 - G 75 -12.5 -2.64616 | TCGCCATTGACATCA TGGCGCCAG ACA CGGGCGCCA ACAGCCAGGACGGCA TERM 3404 2621793 - 2621767 - G 93 -11.6 -4.40993 | overlap 2621769 GAGAAAGCAGGAAAA TAGCGACCAGCG GCG CGCTAATCGCCA CCAGAAAGCCAGGTC TERM 3405 2621791 - 2621769 - G 86 -12 -3.79533 | overlap 2621767 GAAAGCAGGAAAATA GCGACCAGCG GCG CGCTAATCGC CACCAGAAAGCCAGG cdaR 2623709 - 2622528 - | putative regulatory protein TERM 3406 2623883 - 2623864 - R 100 -9.3 -5.18726 | TTCCGACAATAAAAA TGCCGCA ACACGG TGCGGCA TTAAAAAAAAGAGCG perM 2625059 - 2623992 - | PerM family permease TERM 3407 2625609 - 2625624 + G 78 -6.8 -4.65895 | TTTGGCGGCAATGTG GTGCTG CACT CGGCAC TTTTTCGCTACGCGG TERM 3408 2625738 - 2625728 - g 83 -8.2 -4.43681 | opp_overlap 2625729, overlap 2625729 GATGGAAGATCAAAA GCGC AGC GCGC CGCTTACCTGGGTGG yfgC 2625267 - 2626730 + | hypothetical protein yfgD 2626770 - 2627129 + | putative arsenate reductase TERM 3409 2627153 - 2627138 - T 86 -11.8 -3.60792 | opp_overlap 2627130 2627138 CGGTTAACCGTTAAA CGCCGC CGTC GCGGCG TATTACAGTTTCAGG TERM 3410 2627138 - 2627153 + T 79 -11.8 -3.12668 | opp_overlap 2627138, overlap 2627130 CGGTTAACCGTTAAA CGCCGC CGTC GCGGCG TATTACAGTTTCAGG yfgE 2627881 - 2627156 - | DNA replication initiation factor TERM 3411 2627305 - 2627285 - G 74 -4.6 -4.7254 | ACGTTTGAGCAAAAA CCGCCCGA CATCT TCCGGCAG TTCAAACCCCCGTAA TERM 3412 2627944 - 2627924 - R 100 -18.3 -3.58726 | opp_overlap 2627941 TCCCGTGAGATAGAA CCGGGCAGC ATC GCTGCCCGG CAACCCGTTACTGAT TERM 3413 2627956 - 2627976 + r 93 -11.9 -3.65902 | CCGGCAACCCGTTAC TGATGCGGG GGC TCCGCATCA TTTGCCTCCAGTACC uraA 2629241 - 2627952 - | uracil transporter TERM 3414 2628901 - 2628911 + g 74 -2.4 -5.03314 | ATCACATCCAGCCAG CCGG TGC CCGC TTTTTTAACGATGAA TERM 3415 2628974 - 2628964 - G 72 -2.4 -4.84311 | CCGCACATAATAAAA CCGC CCA GCGC CACTTCATAACCCAG TERM 3416 2629287 - 2629315 + r 74 -10.4 -3.13412 | opp_overlap 2629292, overlap 2629292 GTGGTTTTATTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTTA ATTATTTATTCACTT TERM 3417 2629310 - 2629292 - R 100 -11 -5.81412 | opp_overlap 2629287 2629292 TTTATTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTTAATTATTTATT TERM 3418 2629292 - 2629310 + r 93 -10.3 -4.65969 | opp_overlap 2629292, overlap 2629287 TTTATTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTTAATTATTTATT upp 2629955 - 2629329 - | uracil phosphoribosyltransferase TERM 3419 2630281 - 2630261 - H 100 -4.6 -5.82316 | gap 1, overlap 2630262 2630276 ACCATGCAAAAAAAA TCGCCC-GG ATAA CCAGGGCGC AGACCACGCTCGCAA TERM 3420 2630280 - 2630262 - H 76 -8.1 -4.07763 | gap 1, overlap 2630261 2630276 CCATGCAAAAAAAAT CGCCC-GG ATAA CCAGGGCG CAGACCACGCTCGCA TERM 3421 2630365 - 2630352 - H 83 -2.3 -5.78622 | TTACCGCAAAAAAAA CGTGG GGAA CCAGG CAGTGACCGATAAGA purM 2630368 - 2631405 + | phosphoribosylaminoimidazole synthetase TERM 3422 2631531 - 2631515 - g 70 -9.4 -3.73914 | overlap 2631516 AGTATTCAGCAATAA GGCCGA CGCGT TCGGCC TTGAACGCGCCAGAG TERM 3423 2631562 - 2631549 - g 71 -9.5 -3.494 | GAACGCGCCAGAGAA GCCGG TATT CCGGC GCAAGCGCTGACTGC purN 2631405 - 2632043 + | phosphoribosylglycinamide formyltransferase TERM 3424 2633632 - 2633622 - g 91 -6.8 -5.27477 | ACTTCAACGAAAAAA CAGC GCG GCTG TATACCGATTATTCG ppk 2632232 - 2634298 + | polyphosphate kinase TERM 3425 2634455 - 2634429 - g 83 -10.1 -4.07687 | ATCGGGCGTTTAAAA CAGCGCGTCCA TCTGG CGGACGGGCTG GGCGCAGATAATAAA TERM 3426 2634799 - 2634830 + G 81 -12.4 -3.53343 | gap 1, overlap 2634803 2634805 TGGTTGAAAGCCGTC GTATGGGCTGCGTGA GCT TCGCGCAGCTC-TAC TTTCCCGGCGGCGTT TERM 3427 2634803 - 2634827 + G 86 -14.3 -2.90496 | overlap 2634799 2634805 TGAAAGCCGTCGTAT GGGCTGCGTGA GCT TCGCGCAGCTC TACTTTCCCGGCGGC TERM 3428 2634805 - 2634825 + G 81 -13.3 -3.00525 | overlap 2634803 2634799 AAAGCCGTCGTATGG GCTGCGTGA GCT TCGCGCAGC TCTACTTTCCCGGCG ppx 2634375 - 2635844 + | exopolyphosphatase TERM 3429 2635852 - 2635878 + T 100 -18 -3.78022 | opp_overlap 2635847 2635846, overlap 2635854 CCGCGTAAATTGTGA GCCAGACGCCGC GCC GCGGCGTCTGTC TTTACTGAATCTCAG TERM 3430 2635854 - 2635876 + T 100 -19.2 -3.47361 | opp_overlap 2635847 2635846, overlap 2635852 GCGTAAATTGTGAGC CAGACGCCGC GCC GCGGCGTCTG TCTTTACTGAATCTC yfgF 2638093 - 2635880 - | putative diguanylate cyclase SC2501 2638327 - 2638190 - | putative cytoplasmic protein TERM 3431 2638243 - 2638216 - G 72 -2.1 -4.96388 | opp_overlap 2638211, overlap 2638211 AATTATTAAACAAAA GTAACATTTGA TTTAAG TCAATTATTAC CTTTCTCCTGCAGCC yfgG 2638506 - 2638697 + | putative inner membrane protein SC2503 2639113 - 2638850 - | hypothetical protein SC2504 2639408 - 2639722 + | putative cytoplasmic protein insF 2640087 - 2639743 - | putative IS3-like transposase TERM 3432 2640207 - 2640188 - R 100 -10 -5.42975 | opp_overlap 2640188 GCACATAAATAAAAA CCCTCTGC AAAA ACAGAGGG TTAAATTCACTTTTA SC2506 2642886 - 2640508 - | hypothetical protein int 2643241 - 2642981 - | phage integrase family site specific recombinase TERM 3433 2643496 - 2643479 - R 100 -10.5 -5.98675 | CATAAAAACAAAAAA GCCCGCA GTTA CGCGGGC TTAGAGGTACTTTAC guaA 2645123 - 2643546 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3434 2645186 - 2645163 - RH 100 -13.9 -4.56113 | AACAGATTAAATAAA TCGCCCGAC GCGAAG GTCGGGCGA AGAAAATCAGGAGCC imdH 2646845 - 2645193 - | inositol-5-monophosphate dehydrogenase TERM 3435 2645659 - 2645635 - GH 74 -8.5 -3.86524 | opp_overlap 2645657, overlap 2645657 ATATCGCCGGAGAAA CGGATACCGCC GTC AGCGATAACCG GAATTCCGGTGCCTT TERM 3436 2645951 - 2645964 + gH 71 -9.5 -3.23853 | overlap 2645949 CGCCTGCCGCCACCA GCGCG TCAA CGCGC TCTTCGTTGCCCGCG TERM 3437 2648012 - 2648042 + Gr 86 -11.9 -3.53012 | gap 1 CTGGAAGCGGTCAGC CCGT-TAGCCACGC TGGC GCGCGGCTATACGG TTTCGACGACAACGG xseA 2646821 - 2648170 + | exodeoxyribonuclease VII large subunit TERM 3438 2648298 - 2648320 + Tr 100 -12.7 -4.57474 | gap 1, opp_overlap 2648298 TCATTCGCCTCAAAA CCGGGCAGGG AACA CCC-GCCCGG TTTTGTCTAACTTAC TERM 3439 2648320 - 2648298 - TR 100 -14.1 -4.08216 | opp_overlap 2648298 TCATTCGCCTCAAAA CCGGGCAGG GAACA CCCGCCCGG TTTTGTCTAACTTAC TERM 3440 2651236 - 2651248 + Tr 70 -9.1 -3.31144 | GTTGGCATCCAGCAT CAGCG TAC CGCTG TTGTCGACATCACCG TERM 3441 2652367 - 2652381 + Tr 80 -10 -3.90318 | GCGTGCCCTGGCTCA GCGCAA GCG TTGCGC TTTCTGCAATCGTCA TERM 3442 2652415 - 2652446 + Tr 83 -13.8 -2.67244 | gap 1, overlap 2652397 2652395 2652413 2652426 CGCCAGTGCCGAGCG CGGCGGCGTCTTTGG CGG CCAGA-ATGCCGCCG TCAATTTCAGTATCG TERM 3443 2652896 - 2652923 + Tr 71 -6.9 -4.08939 | GGCTTTGATAATTGG CGCGCTGTTGG CGGTAT CCAGCGTCGCG TTTATCTGGCTGTTA TERM 3444 2654247 - 2654266 + Tr 76 -4.2 -5.05116 | gap 1, opp_overlap 2654251, overlap 2654249 2654250 2654251 GCAGCCACGGCGCAA GCCA-GCGC CGC GCGCGTTGC TTTTATTATTTGTCC TERM 3445 2654278 - 2654291 + Tr 81 -3.8 -5.27335 | TTGCTTTTATTATTT GTCC ATATTC GGAC TTTTTGTTTAGGGAA TERM 3446 2654319 - 2654332 + Tr 74 -8.1 -3.8822 | GAATGGATTTCACTC GCGCA TACT TGCGC TTTAACTTTGCTGTG ratB 2662389 - 2655082 - | putative outer membrane protein TERM 3447 2656174 - 2656188 + g 70 -3.4 -4.74706 | opp_overlap 2656153 2656174 GTATTCCGCATCACA GCCGGT TGC GCCCGC TTTTTCAGTGTTCGC TERM 3448 2658036 - 2658086 + g 81 -11.7 -3.56643 | opp_overlap 2658034 2658035 GCGTAGCGCTAAACT CGCTGGCCAGCAGCGGACGCCTG TACGC CACGCCGCTGCTGTCGGTCAGCG TTTCCGCCATATGGC TERM 3449 2658190 - 2658206 + g 86 -10.8 -4.07568 | overlap 2658201 GCCGTTGTGTTCTAT CGCCGC CGTCA GCGGCG TTTTAAAGCCCGCGC TERM 3450 2659226 - 2659257 + g 91 -12.2 -4.15854 | opp_overlap 2659225 2659226 CGGCTTAACACGAAC GGCGCTTGCGGCAG CGGA TTGCCGCTGGCGTC TTTTACCGTCACTTT TERM 3451 2659279 - 2659291 + g 71 -4.7 -4.66833 | CGTCACTTTAAGCTG GAGCG TAT CGCCC TTTTTCACCTTCACC TERM 3452 2659676 - 2659704 + g 72 -12.3 -2.73124 | overlap 2659675 2659693 TCCTGCTCCTGGGTA CGGGTGGCGGCAG TCG CTTCCGCCGCCAG CTTTGGCCGCTGGAA TERM 3453 2661351 - 2661371 + g 93 -16.9 -2.90763 | opp_overlap 2661338 AGGTGTAGCTTGCGC CGTCCACCG TGG CGGTGGACG TCTCTGCCATATGAC ratA 2668152 - 2662555 - | putative outer membrane protein TERM 3454 2666437 - 2666465 + g 77 -11 -3.56378 | gap 1, overlap 2666418 2666435 2666428 GTCCGGCATCACGAT GCGG-ATGGGCGT TTCG ACGCCCAGGCCGC TGTTATGTTTTAACG TERM 3455 2668227 - 2668193 - R 100 -15.9 -3.17075 | TCTGTCGTAATTCAA CCCACTTTGCTTAGC GCGCG GCTAAGCAAAGTGCG CGGAAAATACCACTC TERM 3456 2668258 - 2668235 - R 100 -15.4 -4.0896 | opp_overlap 2668235 2668237 AAAGTGCGCGGAAAA TACCACTCCC CGCG GGGAGTGGTA TGTTGAGGACAACTT TERM 3457 2668235 - 2668258 + r 93 -15.4 -3.02043 | opp_overlap 2668235, overlap 2668237 AAAGTGCGCGGAAAA TACCACTCCC CGCG GGGAGTGGTA TGTTGAGGACAACTT TERM 3458 2668237 - 2668256 + r 85 -13.6 -3.06696 | opp_overlap 2668235, overlap 2668235 AGTGCGCGGAAAATA CCACTCCC CGCG GGGAGTGG TATGTTGAGGACAAC sinI 2669231 - 2668272 - | putative outer membrane protein sinH 2671481 - 2669289 - | intimin-like protein TERM 3459 2669797 - 2669831 + g 84 -3.4 -5.38249 | overlap 2669801 ATAAACACGCAGGGG GTTTCCGTGGTGCAGG GCG TCTGGGCCAGGGTGAC TTTTTTATCATTGCT TERM 3460 2671310 - 2671326 + g 83 -8.1 -4.50841 | CAGCGCCCTGTTTTT TAAAGGA CTT TCCTTTA TTTTCCTGTTCTTCT TERM 3461 2671797 - 2671824 + r 72 -4.8 -4.71426 | gap 1, opp_overlap 2671784, overlap 2671800 AAGACGTCGGCGCCT CTGCTCTGCGGCG CAA CGTCG-ACAGCGG TTTTATTGATCGGAA yfgJ 2672048 - 2671827 - | hypothetical protein TERM 3462 2672115 - 2672088 - R 79 -10.6 -3.60296 | gap 1, opp_overlap 2672083 CACTTTTACTTGAAA GGCCTGA-TAGCG CAG CGCTTGTCAGGCC TGGAATATTACTGAA engA 2673609 - 2672137 - | GTP-binding protein EngA TERM 3463 2673706 - 2673676 - R 74 -11.2 -2.93708 | opp_overlap 2673681, overlap 2673681 CGTTGTTAAAAACAG GAAAACGGCCCCTA CAC CAGGAGCCGTTTTT TAAAACACACAACCG TERM 3464 2673701 - 2673681 - R 95 -11.1 -4.60746 | opp_overlap 2673681, overlap 2673676 TTAAAAACAGGAAAA CGGCCCCTA CAC CAGGAGCCG TTTTTTAAAACACAC TERM 3465 2673681 - 2673701 + r 91 -8.2 -5.00616 | opp_overlap 2673681 2673676 TTAAAAACAGGAAAA CGGCCCCT ACACC AGGAGCCG TTTTTTAAAACACAC yfgL 2674906 - 2673728 - | outer membrane protein assembly complex subunit YfgL yfgM 2675537 - 2674917 - | hypothetical protein TERM 3466 2674998 - 2675012 + g 79 -2.7 -5.25803 | overlap 2674998 2674999 GACGCCCGCTTCCCA TGCGC TGCGC GCGCC TTTTTTATCACCCTT TERM 3467 2675276 - 2675286 + g 91 -6.8 -5.18726 | CCATAGACGCCAGCG CACC ATA GGTG TTTTTATTCTCAGCC TERM 3468 2675612 - 2675564 - R 76 -8.1 -4.1822 | gap 1, opp_overlap 2675593 2675604 CCTTAGCCCAATAAA GTGCGCAAATGCGCGGCGACGC TGTCCT GCGCCACTGC-CGTTTGCTCAC CGGAGCGCAAATCCT hisS 2676825 - 2675551 - | histidyl-tRNA synthetase TERM 3469 2676717 - 2676733 + g 70 -3 -4.71061 | gap 1 GGATTTCACTGTAAC CGTAGCT GCCG AGC-ACG TTTTTGAGTGTGCCT TERM 3470 2676789 - 2676814 + g 84 -6.1 -5.03747 | opp_overlap 2676789 CGCCAGGCAGATAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3471 2676898 - 2676852 - R 80 -5.8 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAGCGCTTCCCCG AACGAA CCGGG-AGCCATGCGGGTTCA ATCATACACGGGAAG TERM 3472 2676927 - 2676907 - R 82 -13.3 -3.00298 | opp_overlap 2676901 GGGTTCAATCATACA CGGGAAGCG CGC CGCTTCCCA TCACGTTCTTATTTT ispG 2678054 - 2676936 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase yfgA 2679085 - 2678081 - | hypothetical protein TERM 3473 2678474 - 2678496 + g 86 -12.6 -3.64703 | overlap 2678486 2678487 TACCGTATTTTGCGT CGCCGCCGCC GTT GGCGCTGGCG TTTGCGTCGCCGCCG TERM 3474 2678486 - 2678544 + g 95 -14.5 -3.60627 | gap 2, opp_overlap 2678521, overlap 2678474 2678487 2678531 2678534 CGTCGCCGCCGCCGT TGGCGCTGGCGTTTGCGTCGCCGCCGTCG AAT CAAC--CGGCGTCGCAGGCGCCGGAGCCG TTTGCGCTGGCGTCG TERM 3475 2678487 - 2678543 + g 86 -15.8 -2.76162 | gap 2, opp_overlap 2678521, overlap 2678474 2678486 2678531 2678534 GTCGCCGCCGCCGTT GGCGCTGGCGTTTGCGTCGCCGCCGTCG AAT CAAC--CGGCGTCGCAGGCGCCGGAGCC GTTTGCGCTGGCGTC TERM 3476 2678539 - 2678521 - G 75 -11.6 -3.33696 | opp_overlap 2678487 2678486 2678531 2678534 CCGCCGTCGAATCAA CCGGCGTC GCA GGCGCCGG AGCCGTTTGCGCTGG TERM 3477 2678989 - 2678977 - G 70 -9.1 -3.66095 | AAACCTTCAGGCAAA GTCGC TCA GCGAC AGCCTGCTGGCTGAG yfgB 2680543 - 2679377 - | hypothetical protein TERM 3478 2680633 - 2680601 - R 76 -4.1 -5.04249 | gap 2, overlap 2680603 GGTTGAAAAAAGAAA CGCCCC-GG-TAAGC TTACT GCTCGTCCGGGGGCG CTGCATTGTACAAAT ndk 2681181 - 2680750 - | nucleoside diphosphate kinase SC2524 2682165 - 2681302 - | putative polyferredoxin TERM 3479 2682085 - 2682055 - G 100 -13.3 -4.18018 | overlap 2682075 CTGCGCCAGCGAAAA CGCCTGCGCCG GACAAACAT CGGCGCAAGCG CGGCAGGAAGAAAAA TERM 3480 2682141 - 2682106 - G 85 -9.1 -4.43037 | gap 2 GGAAGAAAAACGAAA GCGAC-GACG-GACGCA GGCC TGCGTCACGTCTACCGC CGGATCGATCGTCAG ynfH 2682974 - 2682165 - | putative dimethylsulfoxide reductase TERM 3481 2682856 - 2682834 - G 76 -9.1 -3.9712 | gap 1 GCAGGCCAGTACAAA CGCC-CCCGC CATC GCGGGAAGCG CGCCGTGTGCAGGCC dmsB 2683596 - 2682967 - | putative anaerobic dimethylsulfoxide reductase dmsA 2685998 - 2683593 - | putative anaerobic dimethylsulfoxide reductase TERM 3482 2685482 - 2685459 - G 100 -13.8 -4.08767 | TTTATCGCCGGAAAA GGTGCCGCCG GAAA CGGCGGTACC AACATGAACATAGCG TERM 3483 2685942 - 2685955 + g 86 -3.8 -5.36364 | AATAGCAGGCTGTTC GCCA TTTCCC TGGC TTTTTATATTTTTCA TERM 3484 2686085 - 2686069 - H 72 -5.3 -4.60255 | opp_overlap 2686069 ATAATTCCGGAAAAA TTAATAA TTC TTATTAA CTTTAAATTAAATGA TERM 3485 2687699 - 2687671 - H 72 -5.1 -4.57569 | TCATTCGGGCAAAAA GCGGCGCCAGTTG CGG CATTTGACGCGGC GCCAGCCAGACCGGC TERM 3486 2687900 - 2687851 - H 70 -9.7 -3.01712 | gap 1 GCGCCTGCGGCAATA CGGCCAGCAGCGC-CGCGTCAGCG TAG CTCAGGCGCGCGGGCGGCTTGCCG AAGTAGGCCCAGCTT TERM 3487 2688402 - 2688389 - H 88 -5.9 -5.58179 | opp_overlap 2688392, overlap 2688390 2688391 CAGGAGAATAAAAAA CGGCG CGCC CGCCA GCCACAGCCAGCGGC TERM 3488 2688718 - 2688728 + H 71 -6.8 -4.11216 | overlap 2688698 2688697 TGGCGCTGCTGTCAG CCAG ATT CTGG TTTTCCAGCTCCAGC TERM 3489 2689425 - 2689438 + H 80 -9.5 -3.96148 | CAGATTTCGCGCAGC GCGCC GAGC GGCGC TTTCTGCTGACGCGC TERM 3490 2689735 - 2689747 + H 76 -4.7 -4.76041 | AGATGCCGATATCCA CCGCG GCG CGCCG TTTTTCATCGCTATC TERM 3491 2691411 - 2691421 + H 73 -2.4 -5.252 | opp_overlap 2691411 AGCCGCACCTGTAAA CCGG ACA CCGC TTTTTTCTCGCCCTG TERM 3492 2691905 - 2691915 + H 76 -4.6 -5.02074 | overlap 2691898 CACCTCATCCGCAGG CGCC AGC GGTG TTTTTTGCGCCGTCA TERM 3493 2693221 - 2693231 + H 77 -6.8 -4.45083 | overlap 2693213 CTTTGCCCTGGCTTT GCTG CGC CAGC TTTTGTAGCTGTGCC TERM 3494 2693709 - 2693738 + G 100 -8.5 -5.27779 | opp_overlap 2693691 2693711, overlap 2693698 2693711 2693712 GATATGGCGGGCGAA TATCGCGCCGG ACATATTC CCGGCGCGCTG TTTTTTGATATTGAA TERM 3495 2693711 - 2693736 + G 84 -8.9 -4.26398 | opp_overlap 2693691 2693711, overlap 2693698 2693709 2693712 TATGGCGGGCGAATA TCGCGCCGG ACATATTC CCGGCGCGC TGTTTTTTGATATTG TERM 3496 2693712 - 2693735 + G 76 -12.4 -3.14212 | opp_overlap 2693691 2693711, overlap 2693698 2693711 2693709 ATGGCGGGCGAATAT CGCGCCGG ACATATTC CCGGCGCG CTGTTTTTTGATATT TERM 3497 2694106 - 2694121 + G 86 -10.4 -4.11216 | opp_overlap 2694089 2694098 2694097 CGCAAATCGTTGACG CGCGTC CGGC GACGCG TTTTAACGCTCAGGC sseA 2693586 - 2694428 + | 3-mercaptopyruvate sulfurtransferase SC2529 2694675 - 2695343 + | putative cytoplasmic protein TERM 3498 2695444 - 2695459 + T 100 -10.4 -5.67967 | opp_overlap 2695444 CAGGTTACAAAAAAA CCGCTC AATT GAGCGG TTTTTTTGTGCTGGT TERM 3499 2695459 - 2695444 - T 100 -10.4 -5.626 | opp_overlap 2695444 CAGGTTACAAAAAAA CCGCTC AATT GAGCGG TTTTTTTGTGCTGGT TERM 3500 2695670 - 2695709 + T 76 -12.1 -2.57211 | opp_overlap 2695668 2695665, overlap 2695669 2695697 AGAGGATAACCCATG GCCGTAAGCGCAGGCAC ACCGTA GTGCCTGCTATCACGGC ATTATCACCAGCGGT TERM 3501 2695746 - 2695792 + T 71 -7.4 -3.88137 | opp_overlap 2695765 2695768, overlap 2695722 2695765 GTGATGCGGTCTTCG CAAGGACCGCAACATGAAGGTA CGA TACTTTTGTGTCGTGCTTCTTG TTTCTGGCACGTTGT TERM 3502 2695765 - 2695786 + T 71 -7.3 -4.15703 | opp_overlap 2695765 2695768, overlap 2695722 2695746 GACCGCAACATGAAG GTACGATAC TTTT GTGTCGTGC TTCTTGTTTCTGGCA TERM 3503 2695905 - 2695880 - T 70 -10.3 -2.55722 | opp_overlap 2695880 2695884 AGAGCAGGTAAGCCA GGAGGCCGCCC TGTT GGGCGGCTTTC TTTTCTTCAGATGAT TERM 3504 2695880 - 2695905 + T 100 -14.7 -4.66318 | opp_overlap 2695880, overlap 2695884 AGAGCAGGTAAGCCA GGAGGCCGCCC TGTT GGGCGGCTTTC TTTTCTTCAGATGAT TERM 3505 2695884 - 2695901 + T 100 -14.1 -4.87892 | opp_overlap 2695880, overlap 2695880 CAGGTAAGCCAGGAG GCCGCCC TGTT GGGCGGC TTTCTTTTCTTCAGA sseB 2696697 - 2695912 - | enhanced serine sensitivity protein SseB TERM 3506 2696490 - 2696511 + g 75 -5.9 -4.60487 | gap 1, opp_overlap 2696493, overlap 2696489 2696494 GAGAAGTAAAGAAGG GAATGACGGT CGT GCCGTC-TTC TTTTTCCCAGTGCTG TERM 3507 2696494 - 2696508 + g 79 -7.8 -4.41633 | opp_overlap 2696493, overlap 2696489 2696490 AGTAAAGAAGGGAAT GACGGT CGT GCCGTC TTCTTTTTCCCAGTG TERM 3508 2696741 - 2696729 - R 70 -9.1 -3.30124 | opp_overlap 2696737, overlap 2696732 TTGTAGGCCTGATAA GACGC ACG GCGTC ATCAGGCAAAATGCC TERM 3509 2696737 - 2696765 + r 83 -13.1 -3.17075 | opp_overlap 2696729 2696732 2696753 2696754 CTGATAAGACGCACG GCGTCATCAGGCA AAA TGCCGGGTGGCGC TTCGCTTACCCGGCC TERM 3510 2696780 - 2696753 - R 76 -7.6 -4.21194 | gap 1, opp_overlap 2696737, overlap 2696732 2696754 CGTCATCAGGCAAAA TGCCGGGT-GGCG CTT CGCTTACCCGGCC TACAAAAACACCGTT TERM 3511 2696779 - 2696754 - R 77 -11.1 -3.12395 | gap 1, opp_overlap 2696737, overlap 2696732 2696753 GTCATCAGGCAAAAT GCCGGGT-GGCG CTT CGCTTACCCGGC CTACAAAAACACCGT pepB 2698078 - 2696795 - | aminopeptidase B TERM 3512 2696941 - 2696987 + g 70 -9.2 -3.73068 | opp_overlap 2696943, overlap 2696943 CAAAGTGCGACAAAA AACCCGCGGCGGTGCTTGCCCC GGC GGGATAAGCCGCGCTGCCGGTG TTGTTCAGTTCCGCA TERM 3513 2696943 - 2696985 + g 80 -11.8 -3.44686 | opp_overlap 2696943, overlap 2696941 AAGTGCGACAAAAAA CCCGCGGCGGTGCTTGCCCC GGC GGGATAAGCCGCGCTGCCGG TGTTGTTCAGTTCCG TERM 3514 2696985 - 2696943 - G 100 -9.6 -5.25803 | opp_overlap 2696943 2696941 AAGTGCGACAAAAAA CCCGCGGCGGTGCTTGCCCC GGC GGGATAAGCCGCGCTGCCGG TGTTGTTCAGTTCCG TERM 3515 2697705 - 2697734 + g 71 -10.7 -3.24747 | opp_overlap 2697682, overlap 2697724 GCGCGCTGCGCCAGT TGCTCCGGCCCAA GCTC TTCCGCCGGAGCA TTAATGGTGTCGCGC TERM 3516 2698094 - 2698129 + r 76 -7.4 -4.29396 | opp_overlap 2698101, overlap 2698096 2698097 2698101 TGTTATTTTCCTTAT TAGCAAACGGGCCGCC GTAG GGCAGCCCGTTAGATC TTTTGCTAAATGATT TERM 3517 2698096 - 2698127 + r 79 -10 -3.745 | opp_overlap 2698101, overlap 2698094 2698097 2698101 TTATTTTCCTTATTA GCAAACGGGCCGCC GTAG GGCAGCCCGTTAGA TCTTTTGCTAAATGA TERM 3518 2698097 - 2698126 + r 82 -13.5 -2.84218 | opp_overlap 2698101, overlap 2698096 2698094 2698101 TATTTTCCTTATTAG CAAACGGGCCGCC GTAG GGCAGCCCGTTAG ATCTTTTGCTAAATG TERM 3519 2698101 - 2698122 + r 86 -12.9 -3.29856 | opp_overlap 2698101, overlap 2698097 2698096 2698094 TTCCTTATTAGCAAA CGGGCCGCC GTAG GGCAGCCCG TTAGATCTTTTGCTA TERM 3520 2698122 - 2698101 - R 100 -15.1 -3.78775 | opp_overlap 2698101 2698097 2698096 2698094 TTCCTTATTAGCAAA CGGGCCGCC GTAG GGCAGCCCG TTAGATCTTTTGCTA yfhJ 2698456 - 2698256 - | hypothetical protein fdx 2698803 - 2698468 - | [2FE-2S] ferredoxin, electron carrer protein, believed to be involved in assembly of Fe-S clusters hscB 2701182 - 2700667 - | co-chaperone HscB TERM 3521 2700751 - 2700769 + g 100 -16 -3.33315 | GCGCACCGTATCCGC CGCCGCGT CCC ACGCGGCG TTGTCCAACTGTTCC TERM 3522 2700924 - 2700913 - G 71 -7.2 -3.96148 | opp_overlap 2700915 TTGTTCCATCAGAAA CGCG GTGT CGCG TACCGTATGCTGCTC TERM 3523 2701240 - 2701214 - R 79 -8.7 -4.30719 | gap 1, opp_overlap 2701214 GCCTGTCAGAACAAA CCCCACACGCAG GCGA CCACG-GTGGGG TTATACCTTCTTACT iscA 2701701 - 2701378 - | iron-sulfur cluster assembly protein nifU 2702116 - 2701730 - | scaffold protein nifS 2703358 - 2702144 - | cysteine desulfurase yfhP 2704033 - 2703539 - | DNA-binding transcriptional regulator IscR TERM 3524 2704056 - 2704068 + r 85 -6.2 -5.19328 | TTAACCTCAAACTCG CCCC TGCCC GGGG TTTTTATTGTAAAAT yfhQ 2704923 - 2704192 - | putative rRNA methylase TERM 3525 2704602 - 2704590 - G 70 -3.3 -4.77036 | overlap 2704591 2704593 GCTCACGACCAAAAA CCAGC GCA ACCGG CGTATTTGCCGCTTC TERM 3526 2705060 - 2705088 + G 72 -12.3 -2.69964 | overlap 2705055 CATCCGATGCTGACC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATGTAATTGCCAA suhB 2705042 - 2705845 + | inositol monophosphatase TERM 3527 2705853 - 2705878 + F 95 -16.9 -2.74784 | overlap 2705850 2705849 AGCGCTAAGTCTCTT CGGCGGATGGG GCCA CTCATCCGCCG TGCCTTTTCAGGCGT TERM 3528 2706229 - 2706217 - g 70 -6.9 -4.09685 | opp_overlap 2706217 2706216 2706219 CGGCAGGCCGGAAAA CGCCG TCG CGACG GTGATTCATGTCCAT yfhR 2705990 - 2706868 + | putative hydrolase TERM 3529 2707126 - 2707150 + G 95 -11.3 -4.57569 | GGCGCGTGTTTGCCC CGTCCGCAGAG TTT CGCGGCGGACG TTTTTCCGACACTGA TERM 3530 2707932 - 2707908 - g 71 -4.2 -4.56597 | gap 1, overlap 2707910 GGTTTTCGCGAAAAA CCCGGCGAGCG TCTG CGCT-ACCGCG CCCTGCATAAGGTCA asrA 2707050 - 2708093 + | anaerobic sulfide reductase TERM 3531 2708148 - 2708124 - g 74 -8.6 -3.96148 | gap 1 TCCTGTCATGATAAA CCGCAGCACAG TTTG CTGC-CTGCGG CGTACCGCATCCTCA asrB 2708097 - 2708915 + | anaerobic sulfite reductase subunit B TERM 3532 2709675 - 2709663 - g 93 -9.1 -4.77438 | overlap 2709665 2709666 ACGCACCAGTAAAAA GACGC CGC GCGTC GGCAAGCTCTTCCTC asrC 2708926 - 2709939 + | anaerobic sulfide reductase SC2545 2710926 - 2709940 - | putative inner membrane protein TERM 3533 2710032 - 2710074 + g 73 -6.2 -4.44046 | gap 1 TGACCCCTCCGGCCA GCGCCAGCGTTG-ACCAGC CTACCT GCCGCCATAACGCTGGCGC TTTGTTTCCACTGAG SC2546 2711555 - 2710917 - | hypothetical protein TERM 3534 2712032 - 2712016 - g 100 -10.1 -5.00616 | opp_overlap 2712025, overlap 2712025 2712028 CCCGGCCTTAAAAAA CGCGCTA AAG CAGCGCG GTATCGCGCGTCCGC TERM 3535 2712122 - 2712142 + G 83 -7.5 -4.67556 | overlap 2712125 CCATTTGAACATCGC GACGTGCAG TTC CTGCGCCTC TTTTTACAGTATTGT TERM 3536 2712395 - 2712412 + G 74 -10.5 -3.53012 | CTGCGACTGGAGGTG GCGCGGC TGGT GCTGCGC TTTCGAGAAAAAGGG TERM 3537 2712830 - 2712818 - g 71 -4.7 -4.57073 | opp_overlap 2712829 CAGGCGTTTCAAAAA GAGGG ATG CCCGC GCGGCGTAGCGCTGA csiE 2711681 - 2712958 + | stationary phase inducible protein CsiE hcaT 2714092 - 2712953 - | putative 3-phenylpropionic acid transporter TERM 3538 2713298 - 2713316 + g 70 -3 -4.72272 | CAGCAAGTCGCGGGC GCTAAACC GGC GGAATAGC TTTTTACTCAGGGCA TERM 3539 2714223 - 2714185 - R 93 -12.5 -3.69621 | gap 1, opp_overlap 2714186 2714187, overlap 2714186 AGGGAGAAGTTCAAA CGGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCA-CG TTATGGCGCATAAGT TERM 3540 2714223 - 2714186 - R 79 -12.7 -2.81291 | opp_overlap 2714186 2714187, overlap 2714185 GGGAGAAGTTCAAAC GGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCACG TTATGGCGCATAAGT TERM 3541 2714187 - 2714222 + r 76 -11.8 -2.57931 | opp_overlap 2714185 2714186, overlap 2714186 GGAGAAGTTCAAACG GCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCAC GTTATGGCGCATAAG glyA 2715541 - 2714288 - | serine hydroxymethyltransferase SC2550 2715804 - 2715556 - | hypothetical protein TERM 3542 2717031 - 2717017 - g 73 -5 -4.56133 | CGTGAATAACGAAAA CATTCA TTA CGAATG CTTCGGCCCGCATAA hmpA 2715866 - 2717056 + | nitric oxide dioxygenase TERM 3543 2717080 - 2717107 + F 74 -6.9 -4.2679 | opp_overlap 2717080 AATCCTCTGAAAAAA CGGGCGTTATC GTTAAG GCGAACGCCCG TTTTCCTCCCCGTTC TERM 3544 2717107 - 2717080 - f 85 -6.9 -5.01732 | opp_overlap 2717080 AATCCTCTGAAAAAA CGGGCGTTATC GTTAAG GCGAACGCCCG TTTTCCTCCCCGTTC TERM 3545 2717719 - 2717705 - g 81 -7 -4.7657 | opp_overlap 2717705, overlap 2717698 TAAAAAGGCGAAAAA GCCGCG TAT CGCCGC TTTCTGGACGTGGGT TERM 3546 2718248 - 2718259 + G 72 -3.6 -4.82901 | opp_overlap 2718235, overlap 2718251 AACGCCGCAAAATAC CGCG CTGA TGCG TTTTTATGAGGCGCG cadC 2717238 - 2718782 + | DNA-binding transcriptional activator CadC TERM 3547 2718806 - 2718839 + F 83 -9.1 -4.37092 | opp_overlap 2718806 2718811, overlap 2718811 CTGAACCATGACGAA TAAAAGCGAAAAGAT ATTA AATTTTTCGCTTTTA TTTTGTGAAAAACAT TERM 3548 2718834 - 2718811 - f 71 -3.3 -4.73613 | gap 1, opp_overlap 2718811 2718806, overlap 2718806 CCATGACGAATAAAA GCGAAAAGAT ATTAA AT-TTTTCGC TTTTATTTTGTGAAA TERM 3549 2718811 - 2718834 + F 79 -4.6 -5.18371 | opp_overlap 2718806 2718811, overlap 2718806 CCATGACGAATAAAA GCGAAAAGAT ATTA AATTTTTCGC TTTTATTTTGTGAAA TERM 3550 2719345 - 2719334 - g 83 -5.8 -4.8622 | opp_overlap 2719338 2719341 GCTGGCAACCAAAAA CCCT CAAC AGGG TGGCCCTATCGCTTA cadB 2719143 - 2720474 + | lysine/cadaverine antiporter cadA 2720557 - 2722701 + | lysine decarboxylase 1 TERM 3551 2722710 - 2722731 + F 100 -10.9 -5.00616 | opp_overlap 2722702 2722710 GAAATAAGTACCAAA GGGAAGTGG CTTG CTACTTCCC TTTTTTCACGCAGCA TERM 3552 2722731 - 2722710 - f 74 -8.7 -3.90738 | opp_overlap 2722710, overlap 2722702 GAAATAAGTACCAAA GGGAAGTGG CTTG CTACTTCCC TTTTTTCACGCAGCA yjdL 2722757 - 2724217 + | POT family di-/tripeptide transport protein glnB 2724604 - 2724266 - | nitrogen regulatory protein P-II 1 yfhA 2726018 - 2724681 - | putative transcriptional regulator of two-component regulator protein (EBP familiiy) yfhG 2726845 - 2726015 - | hypothetical protein TERM 3553 2726377 - 2726400 + gr 73 -5.2 -4.65895 | gap 1, overlap 2726380 2726382 CCAGACGGGTCACTA TGGCG-CGCCG CTC CGGCGGCGTAA TTTTTGCATCCGCCA TERM 3554 2726382 - 2726397 + gr 79 -11.8 -3.26405 | overlap 2726380 2726377 CGGGTCACTATGGCG CGCCGC TCCG GCGGCG TAATTTTTGCATCCG yfhK 2728223 - 2726781 - | putative sensory kinase in regulatory system TERM 3555 2728170 - 2728158 - GR 78 -5.5 -4.78107 | CAGGATCAGCAAAAA GGCCA GCA TGACC AATTGTCGTAAAGAA TERM 3556 2728300 - 2728270 - R 100 -17 -2.89742 | opp_overlap 2728273 2728277, overlap 2728273 2728277 GGGAAGCGCCAGATA CAACAAAGCCGGGC TAA ACCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3557 2728273 - 2728297 + r 100 -15.8 -3.32844 | opp_overlap 2728270 2728273 2728277, overlap 2728277 AAGCGCCAGATACAA CAAAGCCGGG CTAAA CCCGGCTTTG TTATGGAATAAGGCG TERM 3558 2728297 - 2728273 - R 100 -16.5 -3.5947 | opp_overlap 2728273 2728277, overlap 2728270 2728277 AAGCGCCAGATACAA CAAAGCCGGGC TAA ACCCGGCTTTG TTATGGAATAAGGCG TERM 3559 2728277 - 2728293 + r 90 -10.8 -4.32177 | opp_overlap 2728273 2728270 2728277, overlap 2728273 GCCAGATACAACAAA GCCGGG CTAAA CCCGGC TTTGTTATGGAATAA TERM 3560 2728293 - 2728277 - R 95 -11.5 -4.42974 | opp_overlap 2728277 2728273, overlap 2728273 2728270 GCCAGATACAACAAA GCCGGGC TAA ACCCGGC TTTGTTATGGAATAA purG 2732603 - 2728716 - | phosphoribosylformylglycinamidine synthase SC2561 2732717 - 2732854 + | hypothetical protein TERM 3561 2732878 - 2732868 - g 78 -2.6 -5.1848 | opp_overlap 2732868 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG TERM 3562 2734132 - 2734122 - g 70 -3.2 -4.74103 | CTGTTAAGCCAAAAA CCGT ATT ACAG TAAGCTAACCTACGG yfhD 2732859 - 2734403 + | putative transglycosylase TERM 3563 2734461 - 2734489 + T 79 -9.4 -4.17132 | overlap 2734488 GCATTGCGCTATACT GCCGGCCCCGCG CCTTC CGCACGGTCGGC TTTCTTCAGAGCTTT yfhC 2735005 - 2734454 - | tRNA-specific adenosine deaminase TERM 3564 2734629 - 2734641 + g 71 -4.7 -4.65895 | opp_overlap 2734624 ACGTCAATTAGCGAT CCGGC CGC GCCAG TTTTTGCATCGCGCG yfhB 2735665 - 2735030 - | hypothetical protein TERM 3565 2735649 - 2735639 - G 81 -2.4 -5.38497 | overlap 2735641 2735642 2735644 ATCCAAATCAAAAAA GACG ACA CGAC GCTCGTGGCTGACCA yfeV 2737030 - 2735669 - | putative phosphotransferase system IIB components TERM 3566 2735928 - 2735914 - G 71 -4.2 -4.62069 | GCGTGACGCCAAAAA TCAGCG GCT CGCCAA TCCCCAGCAGTCCGA murQ 2737934 - 2737041 - | N-acetylmuramic acid-6-phosphate etherase yfhH 2738050 - 2738898 + | putative DNA-binding transcriptional regulator TERM 3567 2738930 - 2738902 - T 100 -15.4 -4.0896 | opp_overlap 2738898 2738922 AAACTGGTTTGAAAA TGGCTCTTCCGC CTCAT GCAGAAGAGCCA TCAAGTTTATTGCGC panE 2739854 - 2738937 - | 2-dehydropantoate 2-reductase yhjX 2741072 - 2739876 - | putative permease TERM 3568 2741407 - 2741365 - g 75 -3.7 -4.85545 | opp_overlap 2741366 2741369, overlap 2741366 2741369 ATTAAATTAACAAAA GCAGGCATTATTTTG-CAACG ACA CGCTAACAAAATAATG-CTGG ATTTAAAAAATGCCG budR 2741188 - 2742114 + | LysR family transcriptional regulator yfhL 2742152 - 2742412 + | putative ferredoxin acpS 2742904 - 2742524 - | 4'-phosphopantetheinyl transferase TERM 3569 2742780 - 2742762 - G 74 -6.6 -4.36914 | CGCTTGGCGAGAAAA CGCACCGG CTG CTGATGCG ACTCCCAGATAGCCC pdxJ 2743635 - 2742904 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 3570 2743103 - 2743125 + g 71 -6.2 -4.28254 | overlap 2743105 GCCGCCAGGGTCGCG GCGCTGGC AATACGC GCCAGCTC TTTTGCCTGTTCCGC recO 2744375 - 2743647 - | DNA repair protein RecO TERM 3571 2743688 - 2743705 + g 78 -6.9 -4.66264 | opp_overlap 2743687 2743686 GTTTGGGCATAAATT GCCGGAA CAGC TCCCGGC TTTTTAACGGTTTTC era 2745292 - 2744387 - | GTP-binding protein Era rnc 2746026 - 2745289 - | ribonuclease III TERM 3572 2746189 - 2746227 + r 75 -11.1 -2.96873 | gap 1, opp_overlap 2746192, overlap 2746186 AATTTATCCAGGAAA TAATTCACGCTGCCG-CT AAAA AGACGGCAGCGTGAACGA TCATTTCGTCACAGT TERM 3573 2746224 - 2746192 - R 100 -17.2 -4.015 | gap 1, opp_overlap 2746189 2746186 TTATCCAGGAAATAA TTCACGCTGCCG-CT AAAA AGACGGCAGCGTGAA CGATCATTTCGTCAC lepB 2747216 - 2746242 - | lsignal peptidase I lepA 2749032 - 2747233 - | GTP-binding protein LepA TERM 3574 2747329 - 2747343 + g 85 -2.1 -5.45652 | TTTCTTACCTTCTTT CTGTT TCTGC AGCAG TTTTTTCTTACGACT TERM 3575 2749314 - 2749257 - H 79 -11.4 -3.45027 | gap 1, opp_overlap 2749308, overlap 2749255 2749260 AGTCCTGACTAAACA GCAGCCGGCCTACCGCAGTCACGTTCT TGCAG ACAACGTGACTGCGGTAATCCATCC-C ACCGGATTGTCTTCA TERM 3576 2749312 - 2749260 - H 100 -16.4 -2.87501 | opp_overlap 2749308, overlap 2749255 2749257 CCTGACTAAACAGCA GCCGGCCTACCGCAGTCACGTTCT TGCAG ACAACGTGACTGCGGTAATCCATC CCACCGGATTGTCTT gogB 2749431 - 2750927 + | leucine-rich repeat-containing prophage SC2580 2751154 - 2751330 + | hypothetical protein TERM 3577 2751707 - 2751737 + T 100 -10.5 -6.06723 | AGCTGAATATTACTT CAGGCTGGCGT GTTTTATTA ACGTCAGCCTG TTTTTTTTTACAACA tfa 2752161 - 2751745 - | Fels-2 prophage Tfa pin 2753580 - 2752168 - | Fels-2 prophage Pin SC2583 2753125 - 2753466 + | hypothetical protein TERM 3578 2753520 - 2753486 - GT 71 -5.7 -4.25104 | gap 2, overlap 2753493 2753496 TTGCCCGCAGTAAAA CCAGAC-AGGA-GCGCC GGC AGCGCCTCCCAGTCAGG CTGCGATGTAACATT SC2584 2754260 - 2753580 - | putative bacteriophage protein SC2585 2755456 - 2754257 - | putative bacteriophage protein SC2586 2755810 - 2755457 - | putative bacteriophage protein SC2587 2756701 - 2755946 - | putative bacteriophage protein TERM 3579 2756739 - 2756724 - R 100 -7.5 -5.76633 | opp_overlap 2756724 2756723 CCAGACATAAAAAAA CCCGC TCATCG GCGGG CTTGGTATTAATTAT SC2588 2757550 - 2756765 - | hypothetical protein TERM 3580 2757582 - 2757601 + r 100 -10.7 -5.77571 | opp_overlap 2757576 GTAAGTTAATGATGG CCGCCAG CAGCAA CTGGCGG TTTTTCTTTTTTGCT SC2589 2758178 - 2757615 - | putative bacteriophage protein TERM 3581 2758206 - 2758248 + r 78 -6.3 -4.72986 | gap 1, opp_overlap 2758210, overlap 2758213 GCATACGGTTTCCGA CATAGAGGCCCAGTTAGTGT TAGC GCACTG-CTGGGCTTCGCTG TTTTTACTGGACATG SC2590 2758410 - 2758252 - | hypothetical protein TERM 3582 2758367 - 2758385 + g 78 -6.7 -4.54681 | overlap 2758368 AACTCTTCTTTCACT TTCTGCG GGTAA CGCAGAG TTGTTTTTGCTTCAT TERM 3583 2758458 - 2758430 - H 77 -11.1 -3.28924 | opp_overlap 2758427 CATTCTCCTTTATAA TGGCATTATGCCT TGA AAGCAGAATGCCA CCATTGAATATAAAT SC2591 2758511 - 2758888 + | putative regulatory protein TERM 3584 2758879 - 2758894 + T 70 -10.4 -2.55074 | opp_overlap 2758879 GCCAAAGAGCAAAAA GCCCAC CTAA GTGGGC TCACTTCACCTTCCG TERM 3585 2758894 - 2758879 - T 100 -10.4 -4.93696 | opp_overlap 2758879 GCCAAAGAGCAAAAA GCCCAC CTAA GTGGGC TCACTTCACCTTCCG SC2592 2759230 - 2758895 - | hypothetical protein SC2593 2760258 - 2759227 - | putative bacteriophage protein TERM 3586 2759977 - 2759966 - G 71 -5.8 -4.34402 | opp_overlap 2759966 CCGGTGACAGTAAAA CGGA TATC TCCG TTGAATATCATACCA SC2594 2760563 - 2760261 - | putative bacteriophage protein SC2595 2761217 - 2760567 - | putative bacteriophage protein TERM 3587 2760997 - 2761009 + g 70 -9.1 -3.65199 | AGCAGCGATCCGCCT CCGGA AAA TCCGG TTTCCATCACAACTT SC2596 2763169 - 2761217 - | putative bacteriophage protein TERM 3588 2762284 - 2762307 + g 71 -4.6 -4.56969 | gap 1, opp_overlap 2762283 2762280, overlap 2762291 CGACAACCAGACCAC CGATAACCTCT ATC AG-GGTTTTCG TTTCTTTATCCAGTT TERM 3589 2762291 - 2762301 + g 70 -3.2 -4.74219 | opp_overlap 2762283 2762280, overlap 2762284 CAGACCACCGATAAC CTCT ATC AGGG TTTTCGTTTCTTTAT TERM 3590 2763332 - 2763302 - R 82 -11.8 -3.36968 | opp_overlap 2763319 2763320, overlap 2763320 TATGGAAGGCGAGAA CCGGGCGAAGAATA AAA TCTTCACCGCCCGG CAGGCTGTTGAAGGT SC2597 2763799 - 2763347 - | putative bacteriophage protein TERM 3591 2763685 - 2763670 - G 73 -10.4 -3.35996 | CATCTGCAGGCAGAA GGGAGC GAAT GCTCCC GAAATCTGACATCAT SC2598 2764246 - 2763803 - | putative bacteriophage protein TERM 3592 2763983 - 2764012 + g 100 -7.1 -5.72622 | gap 1 CCAGGTACCTGAGGA CTGACTCTGTGCGT TAT ACGC-CAGTGACAG TTTTTTGTTTGTCGG SC2599 2765404 - 2764259 - | putative bacteriophage protein TERM 3593 2765443 - 2765428 - R 83 -9 -4.32046 | CTCCGAAAAATGAAA CTGGTG CATC CACCAG CGATTTAATGCCGTA SC2600 2765971 - 2765408 - | putative bacteriophage protein SC2601 2766335 - 2765946 - | putative bacteriophage protein TERM 3594 2766305 - 2766295 - GR 74 -3.2 -4.91712 | TTGAAGTCACAAAAA TCCG GGT CGAA AAGAACATCGGTTAC SC2602 2766876 - 2766322 - | putative bacteriophage protein SC2603 2767280 - 2766873 - | putative bacteriophage protein SC2604 2767614 - 2767246 - | putative bacteriophage protein TERM 3595 2767588 - 2767600 + gr 74 -3.3 -4.88405 | CGGGGTGTGAACATG GATGG TAA CCAGC TTTTCTTTCGCCATT TERM 3596 2767629 - 2767646 + r 79 -10.5 -3.56593 | overlap 2767630 TTTTCAGTTTCCTTC TGGCCCC TTTC GGGGCCG TTCTGGTTATCAGAT TERM 3597 2767630 - 2767645 + r 76 -11.8 -2.73474 | overlap 2767629 TTTCAGTTTCCTTCT GGCCCC TTTC GGGGCC GTTCTGGTTATCAGA SC2605 2768597 - 2767656 - | putative bacteriophage protein SC2606 2769106 - 2768609 - | putative bacteriophage protein SC2607 2770343 - 2769111 - | hypothetical protein TERM 3598 2769759 - 2769772 + g 81 -3.7 -5.22258 | GATGGCCGTGCGCAT GCGGG TCCA CCAGC TTTTCTTTTGATTTG TERM 3599 2770067 - 2770092 + g 74 -6.7 -4.30576 | GCTCTTTCCAGTTCT CGGGATTGACC AGCC GGACGTTCCCG TTTTCATCCTCCGGA SC2608 2770966 - 2770358 - | putative bacteriophage protein SC2609 2772449 - 2770980 - | hypothetical protein TERM 3600 2771615 - 2771646 + g 71 -4.4 -4.56597 | TTAGCGTCATGCCTT CATTGCTCTGAAAC TGGC GGATCAGATCAATG TTTTTCAGCAACGCC SC2610 2774071 - 2772449 - | hypothetical protein SC2611 2774652 - 2774074 - | hypothetical protein TERM 3601 2774657 - 2774694 + r 73 -7.5 -4.18802 | opp_overlap 2774646 CAGAGGGACATCACT CCGGCCCGGTATGCCGT CTCG ATGGCCTCCCAGTCCGG TTTTGCCATATCTGT SC2612 2775290 - 2774766 - | hypothetical protein TERM 3602 2775124 - 2775097 - G 74 -10.6 -3.51924 | opp_overlap 2775096 2775100 TGCTCATCGATATAA TCAGCCGACGCA AAAT TGCGTTGGCTAA ATTCGTTGGAGCAAT TERM 3603 2775100 - 2775121 + g 72 -12.3 -2.60244 | opp_overlap 2775097, overlap 2775096 TCATCGATATAATCA GCCGACGCA AAAT TGCGTTGGC TAAATTCGTTGGAGC TERM 3604 2775466 - 2775448 - R 90 -10.2 -4.36262 | opp_overlap 2775448 2775449, overlap 2775449 ATACCGATACCAAAA CGCCCCGC ATC GCGAGGCA TTTTCATGAAAGTCA TERM 3605 2775465 - 2775449 - R 77 -11.5 -3.21034 | opp_overlap 2775449 2775448, overlap 2775448 TACCGATACCAAAAC GCCCCGC ATC GCGAGGC ATTTTCATGAAAGTC enpP 2775957 - 2775508 - | hypothetical protein lycV 2776427 - 2775975 - | Gifsy-2 prophage lysozyme SC2615 2776746 - 2776411 - | Gifsy-1 prophage protein gtgA 2777016 - 2777702 + | hypothetical protein TERM 3606 2777927 - 2777895 - f 100 -22.3 -3.94634 | opp_overlap 2777895 2777899, overlap 2777899 TATGAGGGGAAATAA TAAATATCCTCCGGC TAT GCCGGAGGATATTTA TTCATAAAGAACACA TERM 3607 2777895 - 2777927 + F 100 -22.3 -3.14132 | opp_overlap 2777895 2777899, overlap 2777899 TATGAGGGGAAATAA TAAATATCCTCCGGC TAT GCCGGAGGATATTTA TTCATAAAGAACACA TERM 3608 2777923 - 2777899 - f 100 -18.7 -4.57581 | opp_overlap 2777899 2777895, overlap 2777895 AGGGGAAATAATAAA TATCCTCCGGC TAT GCCGGAGGATA TTTATTCATAAAGAA TERM 3609 2777899 - 2777923 + F 100 -18.7 -4.24342 | opp_overlap 2777895 2777899, overlap 2777895 AGGGGAAATAATAAA TATCCTCCGGC TAT GCCGGAGGATA TTTATTCATAAAGAA SC2617 2778063 - 2778512 + | Gifsy-2 prophage protein SC2618 2778773 - 2778648 - | Gifsy-2 prophage protein TERM 3610 2778900 - 2778881 - R 93 -9.2 -4.84918 | opp_overlap 2778881 GGCACAAACAGAAAA GCCCCGGC AATC ACCGAGGC TTAAATTGTTGCCGG TERM 3611 2779077 - 2779062 - R 100 -8.2 -5.19275 | opp_overlap 2779062 ATCCATAAAAGAAAA CCCCGC CGAG GCGAGG TTCTTAATTCTTGTA req 2779969 - 2779172 - | Gifsy-2 prophage putative molecular chaperone TERM 3612 2780106 - 2780117 + r 70 -2.2 -5.00616 | gap 1 CAGTTCTGGTTTCAT GC-GG CCT CCAGC TTTTTTAGCGCACGC ninG 2780713 - 2780102 - | Gifsy-1 prophage NinG TERM 3613 2780509 - 2780524 + g 78 -6 -4.72201 | overlap 2780510 CCGGGGCTTTCCGCT GGCGCC AGGT GGCGCG TTCTTTTTTCTCAGC TERM 3614 2780510 - 2780523 + g 70 -9.5 -3.42236 | overlap 2780509 CGGGGCTTTCCGCTG GCGCC AGGT GGCGC GTTCTTTTTTCTCAG SC2621 2780916 - 2780716 - | hypothetical protein SC2622 2781524 - 2780922 - | Gifsy-2 prophage protein SC2623 2781807 - 2781559 - | putative bacteriophage protein dinI 2782157 - 2781924 - | Gifsy-1 prophage DinI TERM 3615 2782296 - 2782283 - R 93 -9.5 -4.62336 | opp_overlap 2782283 ATTTTAGGCGAAAAA CCCGC CGCA GCGGG TTATGACGCAACACT TERM 3616 2782283 - 2782296 + r 71 -9.5 -3.28791 | opp_overlap 2782283 ATTTTAGGCGAAAAA CCCGC CGCA GCGGG TTATGACGCAACACT SC2625 2782578 - 2782312 - | putative bacteriophage protein TERM 3617 2782604 - 2782622 + r 86 -4.6 -5.54079 | CTAAGAAATGTTGAT TACAAATC ACT GATTCGTA TTTTTTGATTTTTCA TERM 3618 2782661 - 2782642 - R 71 -10 -3.14931 | opp_overlap 2782638 TTGATTTTTCATTAA TGCCGATC ACAG GACCGGCA TATAGGTGTTTCACG SC2626 2782953 - 2782672 - | hypothetical protein SC2627 2783221 - 2782964 - | hypothetical protein ead 2783487 - 2783224 - | Ead protein SC2629 2783838 - 2783575 - | hypothetical protein SC2630 2784182 - 2783835 - | putative DNA-binding protein TERM 3619 2784011 - 2783993 - G 72 -3.7 -4.77036 | overlap 2783994 GCTGATCACGAAAAA CGCCGCA CCGCC CGTGGCG GATGAAACCTCCGCG dnaC 2784942 - 2784193 - | putative replication protein prpO 2785928 - 2784945 - | Gifsy-1 prophage PrpO TERM 3620 2785357 - 2785374 + g 88 -11.3 -4.09864 | opp_overlap 2785366 2785369 GCCCTTCCCTCTTTT CGGGGAT AACT ATCCCCG TTTTCAGGGATGGCT TERM 3621 2785428 - 2785403 - G 77 -8.3 -4.11484 | opp_overlap 2785394 2785418, overlap 2785404 2785427 CTGAATGGGGTAAAA CGCTATCCCTG TTTT CAGGGATAACT ATCCCCGTTTTCGGG TERM 3622 2785427 - 2785404 - G 76 -11.8 -3.06569 | opp_overlap 2785394 2785418, overlap 2785403 TGAATGGGGTAAAAC GCTATCCCTG TTTT CAGGGATAAC TATCCCCGTTTTCGG TERM 3623 2785955 - 2785993 + r 72 -3.1 -4.91873 | gap 1, opp_overlap 2785962, overlap 2785957 2785962 CCTACCGTTTTTGCA CCAGAAAGCCGTTGGTGA CCCC TCACC-GCGGCTTTCGCC TTTTTGGTTGCTGTC TERM 3624 2785962 - 2785986 + r 72 -8.6 -3.81062 | gap 1, opp_overlap 2785962, overlap 2785957 2785955 TTTTTGCACCAGAAA GCCGTTGGTGA CCCC TCACC-GCGGC TTTCGCCTTTTTGGT SC2633 2786444 - 2786013 - | Gifsy-1 prophage cI protein TERM 3625 2786469 - 2786481 + H 71 -3.4 -4.85782 | opp_overlap 2786469 CCACTCGAACTACAA GTTC GCCGG GAAC TTTGTTTTTAAACCA SC2634 2786704 - 2787123 + | putative DNA-binding protein TERM 3626 2787144 - 2787159 + F 100 -7.5 -5.75478 | opp_overlap 2787144 CTTTAAAACTACTAA CCGCC TTAACT GGCGG TTTTTTTATGTCATT SC2635 2787413 - 2787529 + | Gifsy-1 prophage protein TERM 3627 2787638 - 2787626 - g 74 -3.4 -4.86731 | GGCGCGCAAAGAAAA GGAA TATTG TTCC AGGCAGTGCGCTGAA SC2636 2787522 - 2787680 + | Gifsy-1 prophage protein SC2637 2787702 - 2788052 + | Gifsy-1 prophage protein TERM 3628 2788075 - 2788058 - f 93 -10.5 -4.72497 | CATCCATTAAGAAAA CGCCCAC CGAA GCGGGCG TGCCCTGTCCGGTCC TERM 3629 2789840 - 2789808 - g 80 -11.9 -3.45032 | overlap 2789801 2789799 CAAGAAGAGCCAGAA GCAGCCTGGCCGGAA TAC TTCGAGCCGGGCCGC TATGAAGGTGTACCA recE 2788179 - 2791106 + | Gifsy-1 prophage RecE SC2639 2791117 - 2792226 + | Gifsy-2 prophage protein TERM 3630 2792248 - 2792264 + F 70 -5.1 -4.40572 | CGGGAGGGGTTACGC CCTCC CGCCTGA GGAGG TTTTATGCGCCTTAT SC2640 2792269 - 2792508 + | putative cytoplasmic protein int 2793713 - 2792811 - | Gifsy-1 prophage Int TERM 3631 2793163 - 2793151 - G 78 -2.6 -5.18371 | opp_overlap 2793160 TTTGAGAAAACAAAA CGGC CTGGC GCCA GCTCAATGGCTCGTT TERM 3632 2794133 - 2794121 - R 76 -4.1 -4.96848 | overlap 2794122 TGGTGGACACAAAAA CCATG ACT CATGA TGTCGTAGGTTGACT rseC 2795017 - 2794538 - | SoxR reducing system protein RseC TERM 3633 2794761 - 2794751 - G 73 -5.4 -4.55295 | overlap 2794753 CGCCGCACAAAGAAA TAGC CCC GCTA AAGGCGACATATAGA rseB 2795970 - 2795014 - | periplasmic negative regulator of sigmaE TERM 3634 2795884 - 2795911 + g 74 -9.7 -3.72576 | opp_overlap 2795884 CATCTGCTGCAATAA CGCCCCGGACG CAGGGT CGGCCGAGGCG TTTGCTGAGAAGAAC TERM 3635 2795911 - 2795884 - G 83 -11.9 -3.61715 | opp_overlap 2795884 CATCTGCTGCAATAA CGCCCCGGACG CAGGGT CGGCCGAGGCG TTTGCTGAGAAGAAC rseA 2796686 - 2795970 - | anti-RNA polymerase sigma factor SigE TERM 3636 2796321 - 2796341 + gr 76 -3.2 -5.00616 | gap 1, overlap 2796322 GCCCATTTGGGTAAG CTGCG-CCG CCCA CGGACGCAC TTTTTTCCAGAACGG rpoE 2797227 - 2796652 - | RNA polymerase sigma factor RpoE TERM 3637 2797325 - 2797345 + rH 73 -2.5 -5.1502 | overlap 2797327 TTAGAGTGTCTATGT TTCGTAAAG TTC CGTTACGCA TTTGTTTTTGTTTGT TERM 3638 2797799 - 2797819 + Gr 76 -8.9 -3.72576 | overlap 2797796 2797802 TCCACGTTTTATGCG CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACCGAC TERM 3639 2799169 - 2799200 + Gr 78 -12.4 -2.59431 | gap 1, opp_overlap 2799178, overlap 2799165 GCGTTGCGCGATGAT GCGTAAAGAG-AGCC GGG GGCTGCACTTTACGC TGGATTATCCGCAAC yfiC 2800068 - 2799205 - | hypothetical protein nadB 2797652 - 2799274 + | L-aspartate oxidase TERM 3640 2800032 - 2800019 - Gf 100 -9.5 -5.03145 | CAACCTTGCAAAAAA CGGCG ACAG CGCCG AGTGAAAACAATACC TERM 3641 2800308 - 2800289 - g 80 -9.2 -4.11692 | CAGGCACCGGTAAAA CGGCGGCA TATC TGCTGCCG GCGTTGCAGCACCTG srmB 2800126 - 2801460 + | ATP-dependent RNA helicase SrmB TERM 3642 2801488 - 2801467 - T 95 -14.5 -3.49756 | opp_overlap 2801467, overlap 2801458 GAAGAATGATGATAA TGCCGGGTT CGTT AACCCGGCA TTTTTTTATCTTCCA TERM 3643 2801467 - 2801488 + T 100 -14.5 -5.80817 | opp_overlap 2801458 2801467 GAAGAATGATGATAA TGCCGGGTT CGTT AACCCGGCA TTTTTTTATCTTCCA yfiE 2802422 - 2801478 - | LysR family transcriptional regulator yfiK 2802480 - 2803067 + | neutral amino-acid efflux protein TERM 3644 2803044 - 2803056 + T 77 -3.3 -5.14563 | overlap 2803043 TTACTGCTGGTGTAC TGCGC GGT GCGGA TTTTTTACTGACCCA TERM 3645 2803084 - 2803108 + T 100 -14.3 -3.94877 | opp_overlap 2803084 CCAAATAAAACAAAA GCGGAAAAGGC CCG GCCTCTTCCGC TTGTTATTACCGGAT TERM 3646 2803108 - 2803084 - T 100 -16.5 -5.34857 | opp_overlap 2803084 CCAAATAAAACAAAA GCGGAAAAGGC CCG GCCTCTTCCGC TTGTTATTACCGGAT yfiD 2803512 - 2803129 - | autonomous glycyl radical cofactor GrcA TERM 3647 2803665 - 2803643 - H 77 -3.5 -5.24551 | gap 1, overlap 2803644 2803646 TTAAATCAATAAAAA CCA-CACCAT AAAA ATGGTGATGA AGGGAATTTATTGTT TERM 3648 2804404 - 2804418 + G 80 -4.2 -5.1287 | CATCCCTCGCCACTC TCTGCG CAC CGTGGA TTTTTTGGCTGTAAC ung 2803831 - 2804520 + | uracil-DNA glycosylase TERM 3649 2804524 - 2804536 + T 74 -6.9 -4.37092 | overlap 2804525 GAGAGTGAATAACGT TGGCG GCT CGCCG TTTTATCGCCCGGAT TERM 3650 2804555 - 2804568 + T 75 -9.5 -3.48276 | opp_overlap 2804554 2804555 2804565 TATCGCCCGGATAAC GGCGC GAAA GCGCC TTGTCTGACCGGGCG yfiF 2805673 - 2804636 - | putative methyltransferase TERM 3651 2805112 - 2805134 + g 100 -10.6 -4.72272 | CCTGCTTTACCCATT GCTTAACGGT CGT ACCGTTACGC TTTTTAATCAGGAAA TERM 3652 2805439 - 2805477 + g 100 -15.3 -4.00934 | gap 1 CTTTCTCAGGCGTTT CATCGCC-TGGCGCACGG GACA CGGTGCGCCACGGCGAAG TTTCATGTTTACGGT TERM 3653 2805850 - 2805830 - H 87 -10.4 -4.13591 | opp_overlap 2805830 2805849 GTAACATTATAGAAA CATCCCGC GCGTA GCGGGACG TCTTCCGACGTATTC trxC 2805877 - 2806296 + | thioredoxin 2 TERM 3654 2806303 - 2806323 + F 100 -14.7 -4.16943 | opp_overlap 2806298 2806299, overlap 2806297 GCGCTGTAAACGCCA CGGGGCGCA TCT TGTGCCCCG TTTTCACCTCTGCCA TERM 3655 2806508 - 2806529 + G 76 -2.9 -5.01497 | overlap 2806515 2806520 TGTGTGATACGTTAA CGCCTTCTC AGGC GAAAAGCCG TTTTTGTCTGGTCAT yfiP 2806369 - 2807049 + | putative cytoplasmic protein TERM 3656 2807824 - 2807806 - g 81 -8 -4.25104 | TTCTGGTGATTAAAA GCGGCCGA AGC CCGGCAGC CCAGCGTTTACTTAA yfiQ 2807103 - 2809763 + | putative acetyl-CoA synthetase TERM 3657 2810019 - 2810008 - g 71 -5.8 -4.3739 | opp_overlap 2810009, overlap 2809995 2810009 CACTGCTGGAGAAAA TCGC CAGC GCGA CGCAGCGTATTTGTA pssA 2809875 - 2811233 + | phosphatidylserine synthase TERM 3658 2811240 - 2811256 + F 89 -9.4 -4.66938 | opp_overlap 2811239 ATCCTGTAATCGAAG CCCCGT CCTGT ACGGGG TTTTCTCTTAGGAGT yfiM 2811278 - 2811601 + | hypothetical protein kgtP 2812899 - 2811598 - | alpha-ketoglutarate transporter TERM 3659 2812700 - 2812682 - G 90 -5.8 -5.14563 | opp_overlap 2812681 2812683 2812684, overlap 2812684 GGCCGCATTAAAAAA CCGGCGGC AAA GACGCCTG CTGTTTGCAAAAGCT TERM 3660 2812919 - 2812931 + r 72 -2.6 -5.08255 | overlap 2812908 TTCTCCTTGTTGCCA GGCT TAATC GGCC TTTTATTTTGGAGAT SC2660 2813458 - 2813003 - | hypothetical protein TERM 3661 2813604 - 2813616 + r 73 -10.5 -3.09635 | opp_overlap 2813597, overlap 2813591 AGGCGAAACTGCCAT CCGGC GGT GCCGG TTGCCTGATGGCGCT TERM 3662 2813678 - 2813697 + r 86 -11.4 -3.69283 | opp_overlap 2813678 CGCACACGCAAAAAA GCCCGTCC TGAC GGATGGGC TTCTTCACTAAATTG TERM 3663 2813697 - 2813678 - R 100 -9.2 -5.1287 | opp_overlap 2813678 CGCACACGCAAAAAA GCCCGTCC TGAC GGATGGGC TTCTTCACTAAATTG TERM 3664 2813780 - 2813794 + r 71 -7.8 -3.99324 | opp_overlap 2813780 TGCGCAACGTTCAAA TCCGCT CCC GGCGGA TTTGTCCTCCTCAGG TERM 3665 2813880 - 2813831 - R 100 -22.5 -2.7035 | opp_overlap 2813835 2813840, overlap 2813835 2813840 2813845 CTCACCGACAGACTA CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTATTTG ATGCCTGGCAGTTCC TERM 3666 2813876 - 2813835 - R 100 -21.9 -2.99545 | opp_overlap 2813835 2813840, overlap 2813831 2813840 2813845 CCGACAGACTACAGA TAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTA TTTGATGCCTGGCAG TERM 3667 2813835 - 2813876 + r 100 -17.5 -3.76224 | opp_overlap 2813835 2813831 2813840 2813845, overlap 2813840 CCGACAGACTACAGA TAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTA TTTGATGCCTGGCAG TERM 3668 2813840 - 2813871 + r 100 -13 -4.9448 | opp_overlap 2813840 2813835 2813831 2813845, overlap 2813835 AGACTACAGATAAAA CAAAAGGCCCTGTC TTCC GACAGGGCCCTTCG TTTTATTTGATGCCT TERM 3669 2813871 - 2813840 - R 100 -17.4 -4.63586 | opp_overlap 2813835 2813840, overlap 2813835 2813831 2813845 AGACTACAGATAAAA CAAAAGGCCCTGTC TTCC GACAGGGCCCTTCG TTTTATTTGATGCCT TERM 3670 2813866 - 2813845 - R 100 -15.9 -5.24647 | opp_overlap 2813840 2813835, overlap 2813840 2813835 2813831 ACAGATAAAACAAAA GGCCCTGTC TTCC GACAGGGCC CTTCGTTTTATTTGA TERM 3671 2816501 - 2816513 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3672 2817053 - 2817078 + r 74 -6.9 -4.21408 | opp_overlap 2817060 AAAATTTGAGAGACT CACGAAACAAC TTTC GTTGTTCTGTG TTTCATTTTCAGCTT TERM 3673 2819072 - 2819097 + r 72 -4.7 -4.65895 | gap 1, overlap 2819066 2819078 TCAGCTCACCGTCGC GAGGTG-GCGTA TAT TACGCTTTCCTC TTTTTGAGTCAAGCC TERM 3674 2819078 - 2819090 + r 73 -7.7 -4.13748 | overlap 2819066 2819072 CACCGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTTTGAG TERM 3675 2819316 - 2819333 + r 84 -8.3 -4.6971 | opp_overlap 2819316 GTTTTTAAACAAAAA CGAGCCC GTCA GGGCCCG TTTTATTCAAATTTG TERM 3676 2819333 - 2819316 - R 100 -10.5 -5.27335 | opp_overlap 2819316 GTTTTTAAACAAAAA CGAGCCC GTCA GGGCCCG TTTTATTCAAATTTG clpB 2821926 - 2819353 - | protein disaggregation chaperone TERM 3677 2821122 - 2821102 - G 74 -7.5 -4.1552 | opp_overlap 2821102 CAGCTCGTCAATAAA CAGGATGAC GTT GCCTTCCTG TTTCGCCAGATCGTT yfiH 2822787 - 2822056 - | hypothetical protein TERM 3678 2822260 - 2822242 - G 71 -4.5 -4.56597 | opp_overlap 2822242 CCCGTGCGGCAAAAA TGCGCTA TCGGC TTGCGCA TCTTTTGCTAAAAAT TERM 3679 2822285 - 2822275 - G 78 -6.8 -4.56775 | ATCTTTTGCTAAAAA TGCG TCA CGCA CTTCCGGCCCCACTT rluD 2823764 - 2822784 - | 23S rRNA pseudouridine synthase D TERM 3680 2823796 - 2823806 + H 74 -8.2 -3.8766 | TAACGTTGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC yfiO 2823896 - 2824633 + | outer membrane protein assembly complex subunit YfiO TERM 3681 2824678 - 2824649 - gf 93 -15.1 -2.8917 | opp_overlap 2824654, overlap 2824654 AGCAATACCAACAAG CAAAACGGCAGCC TTCC GGCTGCCGTTTTT TTATTCGATATCTGA TERM 3682 2824673 - 2824654 - gf 100 -15 -4.5774 | opp_overlap 2824654, overlap 2824649 TACCAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGATA TERM 3683 2824654 - 2824673 + GF 100 -15 -5.8187 | opp_overlap 2824649 2824654 TACCAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGATA SC2667 2824608 - 2824763 + | hypothetical protein TERM 3684 2824841 - 2824826 - f 72 -6.2 -4.35693 | opp_overlap 2824825 AAAGTGACAAAATAA TGTGAT TTAC ATCACA CATTTTGACATTAAG yfiA 2824905 - 2825243 + | translation inhibitor protein RaiA TERM 3685 2825269 - 2825284 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGG TERM 3686 2825443 - 2825463 + F 100 -14 -5.5112 | opp_overlap 2825443 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3687 2825463 - 2825443 - f 100 -14 -4.03167 | opp_overlap 2825443 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3688 2826240 - 2826214 - g 75 -5.7 -4.67353 | gap 1, overlap 2826185 2826215 2826216 GCAGCGATGGAAAAA GTCGCGCAGGCG AACT CTCC-GCGCGTC GCGGCGCTCGGCAGC pheA 2825494 - 2826654 + | bifunctional chorismate mutase/prephenate dehydratase yvrE 2827523 - 2826615 - | hypothetical protein TERM 3689 2826824 - 2826840 + g 76 -12.3 -3.0497 | opp_overlap 2826824 2826823 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3690 2826840 - 2826824 - G 72 -12.3 -2.57564 | opp_overlap 2826824, overlap 2826823 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3691 2826881 - 2826871 - G 71 -8.2 -3.85698 | overlap 2826872 CCTTGCGGTGAGAAA CGCG CCA CGCG CCAGCCGTCAAACAT TERM 3692 2827349 - 2827326 - G 77 -7.4 -4.31433 | overlap 2827328 CATGGCCACAATAAA TCCGCCCTGC TCAC GCAAGGCAAA ACAGCCCACCTCTTC TERM 3693 2827560 - 2827546 - R 100 -11.4 -5.37593 | opp_overlap 2827546 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT TERM 3694 2827546 - 2827560 + r 91 -11.4 -4.36262 | opp_overlap 2827546 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT tyrA 2828702 - 2827581 - | bifunctional chorismate mutase/prephenate dehydrogenase aroF 2829782 - 2828712 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3695 2829471 - 2829489 + g 77 -8.1 -4.11216 | gap 1 AATCAGCCCTTTCCA GCCGACGG TAGT CCG-CGGC TTTTCAAAATAGACG TERM 3696 2829636 - 2829618 - G 71 -10.2 -3.24925 | ACCGCATACCACCAA CAGACGCG GAT CGCGCCCG GCAATAATGTCAGAA TERM 3697 2829992 - 2830006 + H 83 -4.2 -5.43514 | opp_overlap 2829992 2829991 2829994, overlap 2829991 2829994 GAAAAGCGGTAAAAT GAGCGA TGC TCGCTA TTTTTTGATTATTTT TERM 3698 2829994 - 2830004 + H 74 -6.8 -4.30543 | opp_overlap 2829992 2829991 2829994, overlap 2829991 2829992 AAAGCGGTAAAATGA GCGA TGC TCGC TATTTTTTGATTATT yfiR 2830222 - 2830740 + | hypothetical protein TERM 3699 2831071 - 2831096 + T 73 -4 -4.74103 | gap 1, opp_overlap 2831068 2831071, overlap 2831073 2831074 AGCCGCAGACGATAA GCTCATTGGCT TAATT AGCCACTG-GC TTTTTCCATTGCCGG TERM 3700 2832069 - 2832047 - T 90 -6.9 -5.33866 | overlap 2832036 CAAACCCATAAAAAA GGGGCCAGC GTAAT GCCAACCCC TTCTTTTCTACAAGC rplS 2832457 - 2832110 - | 50S ribosomal protein L19 trmD 2833265 - 2832498 - | tRNA (guanine-N(1)-)-methyltransferase rimM 2833858 - 2833310 - | 16S rRNA-processing protein rpsP 2834125 - 2833877 - | 30S ribosomal protein S16 TERM 3701 2834181 - 2834149 - R 84 -8.4 -4.63218 | gap 1, overlap 2834152 CTTGTGTGAATAAAA CAACCGGGCCCCATC GAGG AACGGAGCCCGGC-G TCATATTAAAAGCCC TERM 3702 2834179 - 2834152 - R 100 -13.4 -4.43307 | overlap 2834149 GTGTGAATAAAACAA CCGGGCCCCATC GAGG AACGGAGCCCGG CGTCATATTAAAAGC ffh 2835739 - 2834378 - | signal recognition particle protein corE 2835765 - 2836697 + | putative cytochrome c-type biogenesis protein (heme exporter protein C TERM 3703 2836889 - 2836879 - g 75 -4 -4.86033 | AAACGGGTAGAAAAA TTAC TGC GTAA ACCCGACCGACTGAT TERM 3704 2837782 - 2837751 - g 74 -7.2 -4.09685 | overlap 2837752 2837754 GGTCACGCCGCAAAA CGACGGTTCGGTCA TTAT TGACGGTACCGCCA ACGTCCGGGAAATCA yfjD 2836807 - 2838003 + | hypothetical protein TERM 3705 2838010 - 2838027 + F 100 -11.3 -5.252 | opp_overlap 2838010 2838009 GCGGAGTAACACAAT GGCGAAC TCCG GTTCGCC TTTTTTATCGCCGTC TERM 3706 2838027 - 2838010 - f 74 -11.3 -2.82449 | opp_overlap 2838010, overlap 2838009 GCGGAGTAACACAAT GGCGAAC TCCG GTTCGCC TTTTTTATCGCCGTC SC2681 2838124 - 2838729 + | putative cytoplasmic protein TERM 3707 2838755 - 2838735 - T 100 -9 -5.53288 | opp_overlap 2838731 TTTAAGCTAAAAAAA TGGCCGAC TTTAC ATCGGCCA TTAGACTTTTACTTC grpE 2839354 - 2838764 - | heat shock protein GrpE TERM 3708 2839182 - 2839224 + g 79 -2.7 -5.14563 | gap 1, overlap 2839184 AACACGGTGTCGCGT TCGCGAGTCTGG-GCTTCTG CAAG CTGAACTTCCAGATTCGCAA TTTTTTCATCGCGCG TERM 3709 2839320 - 2839332 + g 72 -2.6 -4.84673 | overlap 2839309 ATTTCTTCCGGGGCT TGCC CCTCA GGCG TTTTCTGTTCTTTAC TERM 3710 2839645 - 2839630 - g 80 -4.6 -5.13473 | overlap 2839631 ATTACAGCTAAAAAA TGTGCC AACC GGCACG CTGGCGAAAATTGGT ppnK 2839478 - 2840356 + | inorganic polyphosphate/ATP-NAD kinase TERM 3711 2841000 - 2840988 - g 71 -10.5 -3.27617 | CAACAAAGCCAGGAA CGCGC CGC GCGCG CGGAACTGCTGCAAT TERM 3712 2841382 - 2841367 - g 79 -7.6 -4.42806 | overlap 2841350 GCATCGCTAAACAAA TTTCGC TAGC GCGAAA ACATCACGTCAGCCC recN 2840442 - 2842103 + | recombination and repair protein smpA 2842252 - 2842590 + | hypothetical protein yfjF 2843046 - 2842756 - | hypothetical protein TERM 3713 2842879 - 2842890 + g 77 -4.4 -4.85782 | TTTTACCGGACGACT GTAG ATAC CTAC TTTATTTTTCGCCAG yfjG 2843512 - 2843036 - | hypothetical protein smpB 2843616 - 2844143 + | SsrA-binding protein TERM 3714 2844156 - 2844186 + F 71 -9.8 -3.23492 | overlap 2844154 2844157 TAATAGACATTTTTT GTGACCAGCTTC TCAGTAT GAAGCTGGTCAA TGTTCATATCTCATG TERM 3715 2844157 - 2844185 + F 80 -13.3 -2.53613 | overlap 2844156 2844154 AATAGACATTTTTTG TGACCAGCTTC TCAGTAT GAAGCTGGTCA ATGTTCATATCTCAT TERM 3716 2844345 - 2844365 + F 72 -2.6 -5.0916 | opp_overlap 2844349, overlap 2844347 AATTTAATATTGCTG AATACCTT CACAA AAGGTATG TTTTTATGTTAAAAA SC2689 2844757 - 2845314 + | large repetitive protein TERM 3717 2845779 - 2845767 - g 74 -7.7 -4.16279 | overlap 2845759 GATAGCAGCGGAAAA TGGCA TTT TGCCA TTACCAGCGCGCTAG TERM 3718 2846532 - 2846522 - g 78 -6.8 -4.56597 | CGGGCTGCTGAAAAA TGGC GAT GCCA CAGATGATAACCGCC TERM 3719 2847038 - 2847022 - g 71 -5.7 -4.37092 | overlap 2847024 ACGCGCCGGATAAAA CTGCGCC TGC GGCACCG GACGGTCTTATCGTG TERM 3720 2847264 - 2847239 - g 71 -4.7 -4.57569 | gap 1, opp_overlap 2847245, overlap 2847197 2847245 CGATGTCGCGAAAAA CGA-AAGCGCCG CCG CGACGGTTATCG CTCCGGACAGTACCG TERM 3721 2847985 - 2847947 - g 74 -11 -3.27774 | opp_overlap 2847954, overlap 2847977 CACGCCAACGATTAA TGGTACAGGTGAACCGGG TTC CACAGTACACCTGTATCA GAATGGCGCCCGGAT TERM 3722 2848719 - 2848694 - g 80 -10.5 -3.84961 | gap 1, overlap 2848686 GAGCGAAGGATTAAA CATCC-TGACGG CCA CCGCCACGGATG CCGCAGACAATAGTA amyH 2845347 - 2850350 + | large repetitive protein TERM 3723 2850862 - 2850848 - g 76 -12.8 -2.73875 | overlap 2850845 CGGCGGGCAATACCA GCGCGG TCT CCGCGC CGTGGACGATCGTGG TERM 3724 2853504 - 2853494 - g 72 -4 -4.77173 | TGCCGACAAAACAAA TTGA AGG TCAA CTCATTAACGTGACG TERM 3725 2853545 - 2853571 + G 71 -10.8 -3.31144 | CTGCGGGTAACGCCT CCGGCGCGTTAG GCA TTACTGCGCCGG TTCTGCCGCTGGCGG TERM 3726 2854153 - 2854125 - g 87 -13.2 -3.21416 | gap 1 CACCGCCATCACCAA CGCCAA-CGGCGT CAGT ACGCCGGTCGGCG CGGGTGGCGTGGATA TERM 3727 2854917 - 2854887 - g 71 -7.4 -3.93288 | CCTCACTGAAGTAAA CGGCGTGGCGATTG CGG CGACCGGCACGACG GAGGTAAACGGGCTG TERM 3728 2854999 - 2854986 - g 74 -9.5 -3.64487 | CTACACGCTGAAGAA CGGCG TCGG CGCCG ACAGCATTAAAACGC amyH 2850508 - 2855163 + | large repetitive protein TERM 3729 2855186 - 2855153 - f 77 -11.7 -2.78816 | gap 1, overlap 2855115 CCACGCTTCAGGATA CCGCTGCCTA-GCTGG ACT CCAGCGTCGGCAGCGC CAGTTGGGGGCTACT TERM 3730 2855902 - 2855889 - g 75 -6.7 -4.46615 | CAGTACCAACCAAAA CGATG TTCT CATCG GCTCCGCCTATGGCG SC2692 2855368 - 2856228 + | large repetitive protein TERM 3731 2856261 - 2856236 - f 100 -16.9 -5.24129 | GCGGTTGATAAAAAA GCCCCGAACGC CACG ACGTTCGGGGC AACAAGCGGTGATAT SC2693 2856293 - 2857702 + | putative outer membrane efflux protein TERM 3732 2858700 - 2858680 - g 100 -7.5 -5.78622 | GCACTGCAAAAAAAA CTGGCTGTC CTC GCCAACCAG GCCGCCCACGAAGCG TERM 3733 2858779 - 2858790 + G 74 -7.2 -4.16016 | opp_overlap 2858770 2858787 ATTAAACTGATGCAG GCGG AGAA CCGC TTTCTTCAGCAGTGG rtxI 2857699 - 2859879 + | putative ABC transporter transmembrane region cyaD 2859860 - 2861050 + | HlyD family secretion protein TERM 3734 2861222 - 2861207 - T 79 -3.2 -5.4477 | overlap 2861209 AAAGCCGCAAAAAAA TAGTCG CAAA CGACGA AAACTACGCTTTAGC SC2696 2861583 - 2861269 - | hypothetical protein TERM 3735 2861520 - 2861492 - G 90 -13.1 -3.86252 | opp_overlap 2861492 CTCCACCAAATATAA CGGCCTGATTCTC TTG GAGTTTCAGGCCG TTTCTCTTTGGGCGT TERM 3736 2861492 - 2861520 + g 100 -13.1 -4.33258 | opp_overlap 2861492 CTCCACCAAATATAA CGGCCTGATTCTC TTG GAGTTTCAGGCCG TTTCTCTTTGGGCGT insN 2861671 - 2862009 + | transposase insN TERM 3737 2862664 - 2862650 - g 71 -8.6 -3.79251 | GAGCCGACGAGGAAA CTGTTG GGA CAACAG CCCGATGGAACGCTT insM 2862036 - 2862875 + | hypothetical protein TERM 3738 2863395 - 2863414 + F 74 -3.6 -4.93365 | gap 1 GTTTACCTTAGTTAT CAGC-GAAG TGA TTTCTGCTG TTTTTCATTCTGAAG SC2699 2863501 - 2864460 + | reverse transcriptase-like protein TERM 3739 2864553 - 2864540 - gT 81 -6.7 -4.68908 | GTTATTGAAAAGAAA CCAGT AAAA ACTGG CAAAGATGGTGCTGA SC2700 2864363 - 2865349 + | hypothetical protein TERM 3740 2865487 - 2865535 + T 88 -14.8 -3.03441 | gap 1, opp_overlap 2865499, overlap 2865499 CCGGATACGTCCGGT GAAGTACAGAAAGCCCGCACAGC ACAA GCTCTGCGGGCTTTTT-TACATC TATTGCCGCCTGGTG TERM 3741 2865524 - 2865499 - T 100 -14.7 -4.1347 | opp_overlap 2865499 2865487 GGTGAAGTACAGAAA GCCCGCACAGC ACAA GCTCTGCGGGC TTTTTTACATCTATT TERM 3742 2865499 - 2865524 + T 100 -14.7 -5.15381 | opp_overlap 2865499, overlap 2865487 GGTGAAGTACAGAAA GCCCGCACAGC ACAA GCTCTGCGGGC TTTTTTACATCTATT TERM 3743 2865691 - 2865669 - T 72 -2.6 -4.92385 | overlap 2865671 2865674 GAGAGTCAAAGAAAA TAGAACACTC ACT GAGAGTCCTG CCTGGCTGGGGCAAA fljA 2866506 - 2865967 - | flagellar synthesis: repressor of fliC TERM 3744 2866555 - 2866538 - R 100 -9.8 -4.99134 | ATGCTAAATGAAAAA GCCCCG AATTCA CGGGGC TGAATAAAACGAAAT TERM 3745 2867672 - 2867686 + r 75 -10 -3.55622 | GATGGTCAGAGTGTT GTCCTG CGC CAGGAC TTTCACGCCGTTGAA hin 2870368 - 2869796 - | H inversion: regulation of flagellar gene expression by site-specific inversion of DNA SC2703 2870772 - 2870954 + | hypothetical protein TERM 3746 2870954 - 2870944 - f 76 -4 -5.08824 | TTTTTACGCAAAAAA TCAT CAC ATGA TCAAGTGTCGTATTA iroB 2871059 - 2872174 + | putative glycosyl transferase, related to UDP-glucuronosyltransferase TERM 3747 2873974 - 2874002 + G 70 -5.2 -4.4017 | overlap 2873976 GCAAGGTGTCCGACG TTTCGCTCGCTG ATGAG CGGCGAGGGGGA TTTTCTCGCCCTTGC iroC 2872255 - 2875911 + | putative ATP binding cassette (ABC) transporter TERM 3748 2875950 - 2875972 + F 95 -13.5 -3.77831 | opp_overlap 2875942 2875944 2875943 AAAGAAAGCCCGCAA GCGGCTGTT CCTGT AACAGCCGC TTTAGCTATTAGTAC iroD 2876021 - 2877265 + | enterochelin esterase TERM 3749 2877321 - 2877341 + G 78 -6.1 -4.79667 | opp_overlap 2877320 2877323, overlap 2877323 2877337 CGCCAGTACCACAAC AAGCGCTAT CGC ATGGCGCTA TTTTTAGTGAGTTTT TERM 3750 2877323 - 2877339 + G 76 -8.7 -3.9993 | opp_overlap 2877320 2877323, overlap 2877321 2877337 CCAGTACCACAACAA GCGCTAT CGC ATGGCGC TATTTTTAGTGAGTT TERM 3751 2878139 - 2878157 + G 95 -14.6 -3.58731 | GCAGCATTACCCGGG CATGGGCC ACG GGCCCATG TTTAACGCCTCTTTT IroE 2877297 - 2878232 + | hypothetical protein TERM 3752 2878268 - 2878246 - T 100 -17.8 -3.29043 | AACCCGTCGCCAGAA TATGCCCGCC AGC GGCGGGCATA ACCCATCAAAACGAG iroN 2880454 - 2878274 - | outer membrane receptor FepA TERM 3753 2878492 - 2878507 + g 74 -3.2 -4.87291 | overlap 2878485 CTTCACTACGCGACT CCGC ATGTGTTC GCGG TTTTTGCTTGCCGTA TERM 3754 2880966 - 2880930 - R 100 -21.9 -4.07687 | opp_overlap 2880936, overlap 2880932 2880936 ATGTTGGCTCCAAAA TACAAAGCGCCTGATAA TAT TTATCAGGCGCTTTGCA GACAGAAAACCATCA TERM 3755 2880964 - 2880932 - R 100 -22.3 -3.63744 | opp_overlap 2880936, overlap 2880930 2880936 GTTGGCTCCAAAATA CAAAGCGCCTGATAA TAT TTATCAGGCGCTTTG CAGACAGAAAACCAT TERM 3756 2880960 - 2880936 - R 100 -17.3 -4.45168 | opp_overlap 2880936, overlap 2880932 2880930 GCTCCAAAATACAAA GCGCCTGATAA TAT TTATCAGGCGC TTTGCAGACAGAAAA TERM 3757 2880936 - 2880960 + r 100 -17.3 -3.53012 | opp_overlap 2880936 2880932 2880930 GCTCCAAAATACAAA GCGCCTGATAA TAT TTATCAGGCGC TTTGCAGACAGAAAA SC2709 2881290 - 2880979 - | putative inner membrane protein TERM 3758 2881418 - 2881439 + r 71 -7.3 -4.10566 | opp_overlap 2881415, overlap 2881433 GTAAATAATTTACTC TCAGCTACT ATTC AGTAGCAGA TTGTTATTCTTACAT pipB 2882538 - 2881486 - | pentapeptide repeat-containing protein TERM 3759 2882196 - 2882171 - G 74 -7.6 -4.09243 | CATATTTTTTCAAAA GAGACAAGCG GAATTT CTCTTGTCTC AGAATGGTCGCCTTT TERM 3760 2882286 - 2882302 + g 71 -5.9 -4.36914 | overlap 2882288 CACGACACCCATCCA TATCATC CAG GATGATG TTTTCTGGCAACGGA SC2711 2882610 - 2882948 + | hypothetical protein TERM 3761 2883414 - 2883395 - g 77 -3.5 -5.13016 | overlap 2883397 AAGTAAAATTAAAAA GATCCTC CTGTCC GAGGAAC AAATCTTACTCGCTC virK 2883057 - 2883986 + | virulence protein VirK TERM 3762 2885014 - 2884998 - g 85 -6.6 -4.8622 | TGGTGCAATTAAAAA TGAGTG CAGGC CACTCA GTCCCGGCAGCATAC mig 2884378 - 2885175 + | putative transcription activator TERM 3763 2885215 - 2885183 - T 88 -8.5 -4.85782 | opp_overlap 2885184 2885185, overlap 2885184 2885185 TTTGCTAAAAAGAAA GCCTGGACGTAAATA TGT TTTTTACGTCCAGAT TTTTCATAAATCCTG TERM 3764 2885214 - 2885184 - T 86 -12 -3.50746 | opp_overlap 2885184 2885185, overlap 2885183 2885185 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGTCCAGA TTTTTCATAAATCCT TERM 3765 2885184 - 2885214 + T 100 -9.8 -4.75372 | opp_overlap 2885183 2885184 2885185, overlap 2885185 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGTCCAGA TTTTTCATAAATCCT TERM 3766 2885185 - 2885213 + T 86 -13.3 -3.445 | opp_overlap 2885184 2885183 2885185, overlap 2885184 TGCTAAAAAGAAAGC CTGGACGTAAATA TGT TTTTTACGTCCAG ATTTTTCATAAATCC TERM 3767 2885213 - 2885185 - T 81 -13.3 -2.69725 | opp_overlap 2885185 2885184, overlap 2885184 2885183 TGCTAAAAAGAAAGC CTGGACGTAAATA TGT TTTTTACGTCCAG ATTTTTCATAAATCC nxiA 2886909 - 2885896 - | putative nickel transporter TERM 3768 2886549 - 2886539 - G 87 -2.4 -5.67063 | GCCAGCAGAAAAAAA GCGG AAA CAGC CGTACCAATCAACGA TERM 3769 2886689 - 2886670 - G 93 -4.2 -5.64006 | opp_overlap 2886678 ACCCAATGAAAAAAA CGCCCCCA CGCC TAAAGGCG TTTTACCCTGCTGCA TERM 3770 2886678 - 2886689 + g 74 -7.2 -4.15565 | opp_overlap 2886670 AAAAAAACGCCCCCA CGCC TAAA GGCG TTTTACCCTGCTGCA tctE 2888508 - 2887042 - | tricarboxylic transport: regulatory protein TERM 3771 2887669 - 2887679 + gr 90 -8.2 -4.68593 | opp_overlap 2887668, overlap 2887647 2887649 CTGCGTTTTTAACAC CGCC AGC GGCG TTTTTAACTGGTGAG TERM 3772 2888058 - 2888048 - GR 72 -8.2 -3.72695 | overlap 2888049 ACCGGCTGTAGCAAA CGCG CCA CGCG GATCGCCTCGCCGCG TERM 3773 2888134 - 2888112 - GR 71 -7.6 -3.86346 | CCAGCGCCGGATAAA GCCGGGTACG GGG CGTAGCGGGC GGCATGACGGGCAGA TERM 3774 2888177 - 2888159 - GR 70 -8.9 -3.32343 | overlap 2888167 2888169 GGCAGATCGTCATAA CCGGAAA TGACC TTTCCGG AAGGGTCGACGACTT tctD 2889118 - 2888444 - | tricarboxylic transport: regulatory protein TERM 3775 2888511 - 2888521 + gH 76 -3.2 -5.02074 | GTAATTCGTACATCG CTTC CCT GGAG TTTTTTACGCAGTCG TERM 3776 2889040 - 2889050 + gH 77 -8.2 -4.07687 | CAAATACGCAGTCCA CGGC AAA GCCG TTTTGCACCAGCGCT SC2717 2889157 - 2889276 + | hypothetical protein TERM 3777 2890148 - 2890130 - g 83 -7.3 -4.63527 | opp_overlap 2890130 2890129 CGACGAGTTTAAAAA GCAGCGC GATCT GCGCGGC CTGTTTGAGTTCGAC tctC 2889273 - 2890250 + | tricarboxylic transport tctB 2890262 - 2890696 + | hypothetical protein TERM 3778 2891109 - 2891166 + G 73 -5.6 -4.62336 | overlap 2891117 ATCATTCTGTTCGCC CCTTTACTGGCGCAATGGT-CGCTGGCC TTTG GGCCGGCGGAATATTTCGCCT-TAATGG TTTTTGCCATCGCCT TERM 3779 2891117 - 2891159 + G 75 -11.3 -3.4158 | gap 1, overlap 2891109 GTTCGCCCCTTTACT GGCGCAATGGT-CGCTGGCC TTTG GGCCGGCGGAATATTTCGCC TTAATGGTTTTTGCC tctA 2890707 - 2892221 + | hypothetical protein TERM 3780 2892818 - 2892780 - g 81 -8 -4.25104 | opp_overlap 2892790 2892792, overlap 2892801 CGCTGTTGATCAAAA CGCTCCTCAACCGTGCAC AAG GCGCGCTGTTGATCAGCG TCGAAGGGATCGATG ygaT 2892524 - 2893501 + | hypothetical protein TERM 3781 2894157 - 2894173 + G 91 -7.2 -4.84311 | CGGCTGGTCAAAATG CTGGGC GTGGA GCCCGG TTTTATTATCTGCCC TERM 3782 2894266 - 2894276 + G 71 -8.2 -3.87994 | ACCCGATCCCCGATC CGGC AAT GCCG TTTCTCGGCGTCCAT ygaF 2893527 - 2894795 + | hypothetical protein gabD 2894817 - 2896265 + | succinate-semialdehyde dehydrogenase I gabT 2896280 - 2897563 + | 4-aminobutyrate aminotransferase TERM 3783 2897647 - 2897596 - f 85 -14 -3.05384 | opp_overlap 2897589 CGGGTGGCGACGTAA CTGTCTTATCCGGCCTACAA AAACCGTTTCGA TTGTAGGCCGAATAAGCCAG GCGCCATCCGGTAAA TERM 3784 2897909 - 2897919 + G 83 -8.2 -4.41633 | overlap 2897906 ATGGCCGTCGCCACA CCGG ATA CCGG TTCTTTTTCCACCTA TERM 3785 2898194 - 2898219 + G 74 -3.1 -4.89852 | overlap 2898195 2898217 ATTCTGGCGTTTATC GCGCTGGGCGC GACG GCGATTAGCGG TTTTTATCCGTATGC gabP 2897693 - 2899093 + | gamma-aminobutyrate transporter TERM 3786 2899095 - 2899118 + F 85 -12.4 -3.30124 | opp_overlap 2899088, overlap 2899096 AAAACCTACGTTAGT TCTTCCCGGC GTCA GCCGGGAAGC TTCTCAGGAGTAAAA TERM 3787 2899096 - 2899117 + F 90 -15.9 -2.57931 | opp_overlap 2899088, overlap 2899095 AAACCTACGTTAGTT CTTCCCGGC GTCA GCCGGGAAG CTTCTCAGGAGTAAA TERM 3788 2899618 - 2899632 + G 71 -4.2 -4.57304 | CGCTTATTTGACCTG GCGG CCCGCTA CCGC TTTATTTGGTTACGT TERM 3789 2899772 - 2899751 - g 70 -10.1 -3.37344 | overlap 2899752 GCGCCAGCGAATTAA TGCGTCAGC ATTT GCTGACGCC GATTCCCATTATTCG TERM 3790 2899771 - 2899752 - g 78 -13.6 -2.62192 | overlap 2899751 CGCCAGCGAATTAAT GCGTCAGC ATTT GCTGACGC CGATTCCCATTATTC ygaE 2899135 - 2899812 + | DNA-binding transcriptional regulator CsiR ygaU 2900283 - 2899834 - | hypothetical protein TERM 3791 2900003 - 2899993 - G 70 -5.4 -4.4009 | overlap 2899995 TTTTACGGTATAAAA CTGA CTT TCAG CCGCCGGCGTCGTGG TERM 3792 2900160 - 2900171 + g 91 -7.2 -4.93288 | TCACTTTGTCAGCGT CGGG TATT CCCG TTTTATTTAAATGTT TERM 3793 2900369 - 2900352 - R 90 -14.1 -3.31263 | AGGTTATCCTGATAA GCGGCGC TTAT GCGCCGC CGGTGGCCGGTAATT yqaE 2900541 - 2900383 - | YqaE family transport protein TERM 3794 2900593 - 2900581 - H 78 -6.3 -4.58395 | GTCATTGTTTAAAAA GAGAT TTT ATCTC TAAGCATAGTCAGTT TERM 3795 2900627 - 2900637 + H 76 -8.2 -4.18094 | overlap 2900626 CTGAGCCTGCCAGTC GCGC GCC GCGC TTTTACCCTCCTTTA TERM 3796 2900668 - 2900680 + H 78 -6.3 -4.68655 | CGCTTTTTACGCTGG CATCA GGT TGATG TTTATTTTAGAATTA ygaV 2900724 - 2901023 + | ArsR family regulatory protein ygaP 2901033 - 2901560 + | hypothetical protein SC2731 2901639 - 2901818 + | hypothetical protein stpA 2902309 - 2901908 - | DNA binding protein, nucleoid-associated TERM 3797 2902787 - 2902768 - H 78 -5.8 -4.86033 | opp_overlap 2902768 AAATCGCCAGAAAAA CAATGCAT TATA ATACATTG ATTTAAAAGTAATTA ygaW 2903008 - 2903457 + | hypothetical protein TERM 3798 2903490 - 2903463 - T 79 -12 -3.2496 | gap 1, opp_overlap 2903465 2903466 2903486, overlap 2903458 TAAGGCATAAGTTAA CGTCGCGACTGGC TTT GCCAGTCGCG-CT TTTAGTCGCTTTTTT TERM 3799 2903465 - 2903489 + T 100 -15.7 -4.35675 | opp_overlap 2903463 2903458, overlap 2903466 2903486 AGGCATAAGTTAACG TCGCGACTGGC TTT GCCAGTCGCGC TTTTAGTCGCTTTTT TERM 3800 2903466 - 2903488 + T 100 -19.2 -3.19778 | opp_overlap 2903463 2903458, overlap 2903465 2903486 GGCATAAGTTAACGT CGCGACTGGC TTT GCCAGTCGCG CTTTTAGTCGCTTTT TERM 3801 2903486 - 2903499 + T 75 -3.1 -5.14563 | gap 1, opp_overlap 2903463 2903458, overlap 2903466 2903465 CTGGCTTTGCCAGTC GCG-CT TTT AGTCGC TTTTTTCGTCGCCAA ygaC 2903842 - 2903492 - | hypothetical protein ygaM 2904004 - 2904330 + | hypothetical protein mocR 2905748 - 2904414 - | GntR family transcriptional regulator ynjA 2905837 - 2906268 + | putative cytoplasmic protein SC2738 2906265 - 2906441 + | hypothetical protein TERM 3802 2906491 - 2906510 + F 78 -6.3 -4.67635 | opp_overlap 2906490 CAACACCCGACAATC CGACGCG TTTCAT CGCGCCG TTTTCTCATTTTAAA nrdH 2906525 - 2906785 + | glutaredoxin-like protein TERM 3803 2906936 - 2906973 + GF 70 -3.4 -4.68593 | overlap 2906939 CGTCATACGGCGGCG GCGGGATGGCCGGT-GCG GTGC CGCGACAGGTGATCC-GC TTTTTAAATGATGAA nrdI 2906782 - 2907192 + | ribonucleotide reductase stimulatory protein TERM 3804 2907771 - 2907788 + GF 100 -10.5 -4.80882 | opp_overlap 2907771 CTGCAACTCTCCAAA CGCGGCG GCGG CGTCGCG TTTTTACTCTCCAAT TERM 3805 2907912 - 2907933 + GF 73 -7.9 -4.0641 | gap 1, overlap 2907913 GCCAACCAGCTTGGC GCGCGCCAGG GGG CC-GGCGCGG TTTATCTCCATGCGC TERM 3806 2907913 - 2907932 + GF 75 -11.4 -3.03525 | gap 1, overlap 2907912 CCAACCAGCTTGGCG CGCGCCAGG GGG CC-GGCGCG GTTTATCTCCATGCG TERM 3807 2908045 - 2908006 - gf 79 -2.9 -5.14965 | gap 1 ACGCTGACGAAAAAA TCC-GGATCAAAACGC TCTCTCTCG GCGTGGTGATCCCGGA TATCACCTTCCGGCT nrdE 2907165 - 2909309 + | ribonucleotide-diphosphate reductase subunit alpha TERM 3808 2909957 - 2909990 + G 84 -8.9 -4.2461 | opp_overlap 2909961 AAAAACTATCGGCAA TCGAGCGTGAAGAGT TAAA GCTTTTCGCGCTGGA TTTGTTGATGGAACT nrdF 2909320 - 2910279 + | ribonucleotide-diphosphate reductase subunit beta TERM 3809 2910287 - 2910318 + F 100 -13.2 -4.41616 | ATTTTTAACCTTACG GGCATGGGAAAT AACGTTAC ATTTCCCATGCC TTTATTTCAAGCAAT TERM 3810 2910392 - 2910420 + F 78 -5.4 -4.83593 | overlap 2910396 ATACGAGTGACATTA TTTACCTGGATT CCCCC AATTCAGGTGGA TTTTTGCTGGTTGTT TERM 3811 2911077 - 2911067 - g 71 -4.6 -4.57073 | overlap 2911068 GAGCGTCGCGAAAAA GCGC TGG ACGC CTTGCGTCAGGTGGG proV 2910635 - 2911837 + | glycine betaine transporter ATP-binding subunit proW 2911830 - 2912894 + | glycine betaine transporter membrane protein TERM 3812 2913341 - 2913331 - g 93 -4.6 -5.64274 | TGATCGATAAAAAAA CCGC CGA GCAG TACAACATCACCAAT proX 2912964 - 2913959 + | glycine betaine transporter periplasmic subunit TERM 3813 2913970 - 2914011 + F 81 -12.4 -3.16971 | gap 1, opp_overlap 2913982 AATAATATCGTTTTT TATGCCGGATA-AGGCGCA GTTCA TGCGCCGCTATCCGGCCTA TTCAATCTCTCCTCA TERM 3814 2913998 - 2913982 - f 70 -9.4 -3.30124 | opp_overlap 2913970 TTTTATGCCGGATAA GGCGCA GTTCA TGCGCC GCTATCCGGCCTATT TERM 3815 2914884 - 2914905 + G 71 -10.1 -3.53444 | gap 1, overlap 2914883 TGATTGGCCTGTTTG GC-CTGGCGG GGG CCGCCGGCGC TTTAGGCGCGCGTCC TERM 3816 2915209 - 2915225 + G 85 -11.5 -4.0371 | opp_overlap 2915209, overlap 2915210 CTCCGCCTGGCAACA TGCCGGC TGG GCCGGCG TTTGTCTGGCGGGTG TERM 3817 2915210 - 2915224 + G 81 -12.8 -3.01905 | opp_overlap 2915209, overlap 2915209 TCCGCCTGGCAACAT GCCGGC TGG GCCGGC GTTTGTCTGGCGGGT ygaY 2914124 - 2915308 + | putative inner membrane protein TERM 3818 2915865 - 2915886 + G 71 -5.9 -4.24326 | opp_overlap 2915865, overlap 2915857 2915868 GCCAGCCGTCACGAA GACTTTCCT TATC AGGAAATTC TTTTGACTCGTCTTT TERM 3819 2915868 - 2915883 + G 71 -6.2 -4.22883 | opp_overlap 2915865, overlap 2915865 2915857 AGCCGTCACGAAGAC TTTCCT TATC AGGAAA TTCTTTTGACTCGTC emrR 2915805 - 2916335 + | transcriptional repressor MprA TERM 3820 2916383 - 2916406 + F 71 -7.4 -3.85817 | opp_overlap 2916377 ACAGGAAAGCGGACA GGCCGGCA CGCATTAC TGCTGGCC TTTCTGACAACAGGT TERM 3821 2916781 - 2916771 - g 71 -4.6 -4.58283 | overlap 2916778 2916779 2916780 CAAGCGTTTGAAAAA GCCA AAA CGGC GCTGGCCTCCAGCGT TERM 3822 2916799 - 2916778 - g 75 -6.5 -4.4874 | gap 1, opp_overlap 2916791, overlap 2916771 2916779 2916780 TTGAAAAAGCCAAAA CG-GCGCTGG CCT CCAGCGTGCG CCAGACGCACCAGTT TERM 3823 2916886 - 2916862 - g 76 -2.8 -5.03314 | gap 1, overlap 2916863 2916884 TCGACGTGCAAAAAA CCGCCCTGGCG CAAG CGC-AAAGCGA CCTTAACCGTCGTGT emrA 2916435 - 2917634 + | multidrug resistance secretion protein TERM 3824 2918409 - 2918434 + G 83 -7.6 -4.56791 | opp_overlap 2918411, overlap 2918402 2918412 GATCGTCTGGGAACT GACCGACGAT CACCCT ATCGTCGATC TTTCTCTTTTTAAAT emrB 2917651 - 2919189 + | MFS superfamily, multidrug transport protein TERM 3825 2919218 - 2919203 - T 86 -9 -4.41206 | opp_overlap 2919203 AACTATCTGATAAAA GGGATC TGCG GATCCC TTTTTTAGTAGACCA TERM 3826 2919203 - 2919218 + T 100 -9 -5.14563 | opp_overlap 2919203 AACTATCTGATAAAA GGGATC TGCG GATCCC TTTTTTAGTAGACCA SC2750 2920608 - 2919238 - | putative glycoporin TERM 3827 2919470 - 2919482 + g 70 -2.7 -4.77567 | TCGATATTGGTAGCA TTGAA GGC TTCGA TTTTGTTATGCGCAT TERM 3828 2919766 - 2919749 - G 75 -6.2 -4.56775 | ATCGCCGTTGAAAAA CGCCCG TTTTGC CAGGCG ATAACCGGACGGACG SC2751 2920753 - 2920896 + | hypothetical protein TERM 3829 2920919 - 2920901 - T 100 -12.4 -5.5604 | opp_overlap 2920897 2920901 TTAAGCAATAAAAAA CCCCGGTC ATA AACCGGGG TTAATTTAAATACTG TERM 3830 2920901 - 2920919 + T 86 -11.7 -3.55122 | opp_overlap 2920901, overlap 2920897 TTAAGCAATAAAAAA CCCCGGT CATAA ACCGGGG TTAATTTAAATACTG luxS 2921469 - 2920954 - | S-ribosylhomocysteinase TERM 3831 2921222 - 2921212 - G 77 -8.2 -4.18494 | overlap 2921199 2921213 CAGGCTCATGTAAAA GCCG GTG CGGC AGCCCATCGGCGAGA TERM 3832 2921367 - 2921399 + g 71 -4.7 -4.56597 | opp_overlap 2921365 AACGCAGATCAAACA CGGTGATTGCGTCGC CAT GCGGGGTGTTCATCG TTTTTGCAACCCGGA TERM 3833 2921587 - 2921605 + r 100 -14.6 -5.48213 | opp_overlap 2921584 CAGCGATGAAATTTT GGCCACTC CGT GAGTGGCC TTTTTCTTTTGGGTC gshA 2923175 - 2921619 - | glutamate--cysteine ligase TERM 3834 2922483 - 2922514 + g 74 -2.2 -5.0133 | gap 1, opp_overlap 2922472, overlap 2922486 2922505 2922512 CAAACGCAGCGACGT CGCA-TACGGCAGGT AGT ACATGCCGCAGTCCG TTTTTTCAAACGGTA yqaA 2923677 - 2923252 - | putative inner membrane protein yqaB 2924240 - 2923674 - | fructose-1-phosphatase TERM 3835 2924180 - 2924153 - G 74 -7.6 -4.09243 | gap 1, opp_overlap 2924154, overlap 2924154 CATAGCGCCCCAAAA CCTCACGCCACGC TTT GCGATGCGTG-GG TTCGGTATCCAGGAG TERM 3836 2924389 - 2924404 + r 72 -9 -3.57783 | overlap 2924395 ATTCACCTTATGGGC CGTTGC TGAC GCAACG TTATCCTTCTGATGC csrA 2925547 - 2925362 - | carbon storage regulator TERM 3837 2925731 - 2925776 + r 72 -9 -3.61089 | gap 2, opp_overlap 2925744 TTATCGTTGTCGATA GCGTTGACGTAAACGCCGCAGC ACGG GCTGCGGCGCCAACG--AACGC TTATAATTATTGCAA TERM 3838 2925765 - 2925744 - R 100 -17.3 -3.6502 | opp_overlap 2925731 TAGCGTTGACGTAAA CGCCGCAGC ACGG GCTGCGGCG CCAACGAACGCTTAT alaS 2928413 - 2925783 - | alanyl-tRNA synthetase recX 2929149 - 2928649 - | recombination regulator RecX TERM 3839 2929199 - 2929180 - R 91 -11.4 -4.26189 | opp_overlap 2929180 2929171 GGAGAAATGCCAAAA GGGCCGCA TAAA TGCAGCCC TTGATGGTAATTTAA recA 2930327 - 2929266 - | recombinase A ygaD 2930909 - 2930412 - | competence damage-inducible protein A TERM 3840 2931379 - 2931354 - R 80 -9.8 -3.88601 | gap 1, overlap 2931344 CAAAAGCCATAATAA TAGCGGAGGGG GTGCT CCCCTCC-CTA AGCGTAAATTAGCGC mltB 2932515 - 2931388 - | murein hydrolase B srlA 2932721 - 2933284 + | PTS family, glucitol/sorbitol-specific enzyme IIC component,one of two IIC components TERM 3841 2933459 - 2933449 - g 71 -8.2 -3.9122 | overlap 2933450 GACGGCTTTAAAGAA GGCG AAC CGCC GGAAGCGGAAATCGG srlE 2933281 - 2934252 + | PTS family, glucitol/sorbitol-specific IIB component, one of two IIC components slrB 2934264 - 2934626 + | glucitol/sorbitol-specific PTS system component IIA srlD 2934638 - 2935417 + | sorbitol-6-phosphate dehydrogenase gutM 2935493 - 2935852 + | DNA-binding transcriptional activator GutM TERM 3842 2936297 - 2936284 - g 84 -3.1 -5.30686 | gap 1, overlap 2936286 AACACCCACAAAAAA GC-GCT GAT AGCCGC AGCCGCTGTGAAATA srlR 2936050 - 2936823 + | DNA-bindng transcriptional repressor SrlR gutQ 2936816 - 2937781 + | D-arabinose 5-phosphate isomerase ygaA 2939300 - 2937786 - | anaerobic nitric oxide reductase transcription regulator TERM 3843 2939585 - 2939571 - g 86 -7.8 -4.68724 | overlap 2939572 GCACTGAATACAAAA CGCTGC GTG GCAGCA GCTATAACAGCTATC TERM 3844 2939876 - 2939862 - g 70 -7 -4.09739 | TTAAGGTGGTGAAAA CCGGCG ATA CGCTGG ATATCGGCAACGGCA norV 2939486 - 2940925 + | anaerobic nitric oxide reductase flavorubredoxin TERM 3845 2941350 - 2941330 - g 71 -11.1 -2.87132 | opp_overlap 2941327 2941330 2941344, overlap 2941333 CGCGCCTGTGAGATA CCACTGCGC GAC GCGCAGCGA GTGCTGATTGTCGGC ygbD 2940922 - 2942055 + | nitric oxide reductase hypF 2944392 - 2942152 - | hydrogenase maturation protein TERM 3846 2942413 - 2942393 - G 71 -6 -4.30844 | overlap 2942395 AGCGCATCATGAAAA GCCCAAGC GCGTT GCGCGGGC GTGGCCTGCCAGTTC TERM 3847 2942595 - 2942559 - G 76 -12.3 -3.12351 | gap 1, overlap 2942580 CGCCCTCATAGCTAA GCGAT-GCTGGCGCGC AGCGAA GCGCGGCAGCCACCGC GTCAAACAACCGCCC TERM 3848 2942739 - 2942725 - G 82 -11.4 -3.86346 | CCAGTCCGGCACAAA GCGCAG GCA CTGCGC CAACAGATTACGCCA TERM 3849 2943895 - 2943875 - G 74 -6.8 -4.25104 | opp_overlap 2943873 2943875 GGCTGGGTATGAAAA CGGCGATC GTACG GATCGCGG TATTCGCTGTCGCAT hydN 2945083 - 2944538 - | electron transport protein HydN TERM 3850 2944568 - 2944582 + g 87 -8.5 -4.58395 | opp_overlap 2944549 2944567 TGCCGTTGAATCCAG CGCCG CACGA CGGCG TTTTTCCGCGCTCAG TERM 3851 2945190 - 2945219 + r 90 -15.1 -2.62616 | opp_overlap 2945206, overlap 2945178 TTTCGTGAGCATTTA CGTGTCATCGTCA CAAG TGTCGATGACACG TAATGTCGCCAGTGG SC2777 2946093 - 2945284 - | putative periplasmic or exported protein hycI 2946590 - 2946120 - | hydrogenase 3 maturation protease hycH 2946993 - 2946583 - | processing of HycE (part of the FHL complex) TERM 3852 2946638 - 2946666 + g 70 -8.9 -3.75024 | opp_overlap 2946647, overlap 2946647 TCCTGATGAATGTCA TGCAGCATACTGA GCA TCAGTTTGCTCCA TTCTTGCTGCTGCGG TERM 3853 2946686 - 2946722 + g 71 -10.1 -3.59315 | gap 1, overlap 2946689 TGCTGCTGCGGGGTC TGCGCGGCGCGCGCCT CATCAA ACGCGCGCGCCA-GCA TTTGCACATGGTTGA TERM 3854 2946689 - 2946721 + g 76 -12.7 -2.75268 | gap 1, overlap 2946686 TGCTGCGGGGTCTGC GC-GGCGCGCGCCT CATCAA ACGCGCGCGCCAGC ATTTGCACATGGTTG hycG 2947757 - 2946990 - | hydrogenase activity hycF 2948299 - 2947757 - | formate hydrogenlyase complex iron-sulfur subunit hycE 2950018 - 2948309 - | formate hydrogenlyase subunit 5 precursor hycD 2950959 - 2950036 - | hydrogenase 3, membrane subunit (part of FHL complex) TERM 3855 2950791 - 2950773 - G 71 -4.5 -4.62069 | gap 1, overlap 2950774 GCGTCAGGCGAAAAA CCCAGCCG GAAT CAGC-GGG CGCAATACTCTGACG hycC 2952788 - 2950971 - | formate hydrogenlyase subunit 3 TERM 3856 2951034 - 2951046 + g 71 -10.5 -3.28712 | opp_overlap 2951030 2951028 ACGACGGAACAGCAC CGCGG CCG CCGCG TTCTGCCAGCCCGGC TERM 3857 2952381 - 2952363 - G 76 -12.4 -3.14211 | opp_overlap 2952363 2952362 2952365 ACCGCCGGTGAGGAA CACGGCGC AGA GCGCCATG ATTTCCGCCATTACC TERM 3858 2952738 - 2952726 - G 75 -6.9 -4.52214 | overlap 2952734 AAACGAAAACAGAAA CGCCA GAA CGGCG GCGGCGGCAAACCAC TERM 3859 2952762 - 2952734 - G 73 -10.2 -3.41528 | gap 1, overlap 2952726 ACAGAAACGCCAGAA CGGCGGCG-GCGG CAAA CCACGCGACGCCG CTAGTAATCAGTGAA hycB 2953396 - 2952788 - | hydrogenase-3, iron-sulfur subunit (part of FHL complex) TERM 3860 2953518 - 2953488 - R 72 -9 -3.65542 | overlap 2953486 2953497 CCCATCCCCAAAACA TTCATGACATGGCG CAA CGCCACATCGCGAA TCAAAGCGGGCAACG hycA 2954003 - 2953542 - | formate hydrogenlyase regulatory protein HycA hypA 2954213 - 2954569 + | hydrogenase nickel incorporation protein TERM 3861 2954601 - 2954570 - f 70 -8.8 -3.40601 | gap 1 GAAACTGAAGATTAA TGCCGGATAGACG CTCGCGT CGCC-ATCCGGCA GAAAGCCTGTAACAA hypB 2954638 - 2955510 + | hydrogenase nickel incorporation protein HypB hypC 2955501 - 2955773 + | hydrogenase isoenzymes formation protein TERM 3862 2955892 - 2955914 + G 86 -7.6 -4.82855 | opp_overlap 2955890, overlap 2955893 GCGCATTATGGAAGT CTGCGGGGGT CAT ACCCACGCAA TTTTTAAATTTGGTC TERM 3863 2955893 - 2955913 + G 77 -11.1 -3.48629 | opp_overlap 2955890, overlap 2955892 CGCATTATGGAAGTC TGCGGGGGT CAT ACCCACGCA ATTTTTAAATTTGGT TERM 3864 2956668 - 2956640 - g 91 -14.6 -3.05384 | opp_overlap 2956631 CTGGGCGTGATTGAA TCCTCCGGCGTC CACCT GACGCCGGAGTA TCAGCGCTTTGACGC hypD 2955773 - 2956894 + | putative hydrogenase expression/formation protein TERM 3865 2957030 - 2957052 + G 70 -5.4 -4.38712 | AGCTGGCGCAGCTGA CGGCGGAGGG CGA CCGTCTGGCG TTTTCTACCGATAGC hypE 2956891 - 2957901 + | putative hydrogenase expression/formation protein fhlA 2958009 - 2960198 + | formate hydrogen-lyase transcriptional activator ygbA 2960604 - 2960260 - | hypothetical protein TERM 3866 2960402 - 2960442 + g 95 -9.6 -4.72272 | opp_overlap 2960416, overlap 2960403 ATCTCCTCGCGTTTA GCCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGGG TTTTTCCTCGCCAAA TERM 3867 2960403 - 2960441 + g 84 -13.1 -3.43042 | opp_overlap 2960416, overlap 2960402 TCTCCTCGCGTTTAG CCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGG GTTTTTCCTCGCCAA TERM 3868 2961370 - 2961336 - g 74 -2.1 -5.09426 | gap 1 CCGAACTGGAAAAAA TTC-CCGCCGATCAGC GCTG GCTGGTCACCAGTGAA GGCGCGTTCTCTTAC sitA 2960786 - 2961703 + | iron transporter: fur regulated sitB 2961700 - 2962521 + | iron transporter: fur regulated sitC 2962518 - 2963378 + | iron transporter: fur regulated sitD 2963369 - 2964217 + | iron transporter: fur regulated sprB 2965249 - 2964494 - | transcriptional regulator TERM 3869 2964669 - 2964685 + g 77 -3.7 -5.03145 | TAAATACTGACGGTT TTTGTTC CCA GACCAAA TTTTTTCGCCAGTTC hilC 2966521 - 2965634 - | AraC family transcription regulator SC2800 2967318 - 2966866 - | putative cytoplasmic protein TERM 3870 2966930 - 2966907 - G 71 -6 -4.36914 | opp_overlap 2966907 2966910, overlap 2966911 CCCCGCCCGATAAAA TAATCTCCTG CATC CAGGAGGTCA TTTGTGACTGTGCGT orgB 2967995 - 2967315 - | putative flagellar biosynthesis/type III secretory pathway protein orgA 2968530 - 2967952 - | putative inner membrane protein TERM 3871 2968315 - 2968344 + gr 100 -16.5 -3.11073 | overlap 2968315 2968318 TTGCGGCAGTCGGCG CCACTGACGCAGC CACA GCTGCGTCAGTGA GTTTTGAATACACTC TERM 3872 2968315 - 2968345 + gr 100 -16.3 -4.1899 | gap 1, overlap 2968315 2968318 TTGCGGCAGTCGGCG C-CACTGACGCAGC CACA GCTGCGTCAGTGAG TTTTGAATACACTCC TERM 3873 2968318 - 2968341 + gr 100 -16.8 -2.76404 | overlap 2968315 2968315 CGGCAGTCGGCGCCA CTGACGCAGC CACA GCTGCGTCAG TGAGTTTTGAATACA prgK 2969281 - 2968523 - | cell invasion protein; lipoprotein, may link inner and outer membranes TERM 3874 2968555 - 2968586 + g 77 -4.5 -4.91109 | opp_overlap 2968584 TCGCCTTATCATCAG CCGTTATGCCT TTCTTATTGC GGGCATAATGG TTTTTGTAATACCAG prgJ 2969583 - 2969278 - | cell invasion protein; cytoplasmic prgI 2969844 - 2969602 - | cell invasion protein; cytoplasmic prgH 2971104 - 2969869 - | cell invasion protein hilD 2971363 - 2972292 + | regulatory protein TERM 3875 2972563 - 2972595 + F 100 -11.3 -4.81163 | overlap 2972565 GATGACACTATCTCC TTCCGGCTTTAACCC TGT GGATTAAGGCCGGCA TTTTATTCATATTTA TERM 3876 2972565 - 2972593 + F 83 -13.9 -2.66616 | overlap 2972563 TGACACTATCTCCTT CCGGCTTTAACCC TGT GGATTAAGGCCGG CATTTTATTCATATT hilA 2973384 - 2975045 + | invasion protein regulator iagB 2975063 - 2975545 + | cell invasion protein TERM 3877 2975601 - 2975546 - T 74 -7.2 -4.32678 | opp_overlap 2975555 2975557, overlap 2975557 GCGTCAAACAAATAA TTATACAGAAATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATGTTTTTATCA GCGTGCCGTCGTCAT TERM 3878 2975555 - 2975592 + T 100 -10.1 -4.84359 | opp_overlap 2975546 2975557, overlap 2975557 AAATAATTATACAGA AATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATG TTTTTATCAGCGTGC TERM 3879 2975590 - 2975557 - T 100 -14.9 -4.18019 | opp_overlap 2975557 2975555, overlap 2975546 ATAATTATACAGAAA TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA TGTTTTTATCAGCGT TERM 3880 2975557 - 2975590 + T 95 -12.7 -4.04397 | opp_overlap 2975546 2975557, overlap 2975555 ATAATTATACAGAAA TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA TGTTTTTATCAGCGT sptP 2977230 - 2975599 - | protein tyrosine phosphate sicP 2977567 - 2977217 - | chaparone, related to virulence SC2812 2977896 - 2977636 - | hypothetical protein iacp 2978188 - 2977940 - | acyl carrier protein sipA 2980264 - 2978207 - | cell invasion protein TERM 3881 2979399 - 2979409 + g 76 -3.2 -5.0133 | TTGATATTAATACCC GTAG GTT CTGC TTTTTTCCCACCATC sipD 2981314 - 2980283 - | cell invasion protein sipC 2982614 - 2981385 - | cell invasion protein TERM 3882 2982369 - 2982389 + g 70 -6.9 -4.07687 | CAAATCCTGATTCAT GTCGGTATT TTG AATACTGGC TTTTAAAAAGGACGT sipB 2984423 - 2982642 - | cell invasion protein TERM 3883 2982684 - 2982670 - G 74 -4.2 -4.77165 | opp_overlap 2982671, overlap 2982671 TGGCGCAGAATAAAA CGCGAA GCA TCCGCA TTTTGCTGTACCGCA TERM 3884 2983965 - 2983977 + g 81 -6.9 -4.77438 | GTCATAAACACTCTT GGCGG TAT CCGTC TTTTTGATACTGGCT TERM 3885 2984373 - 2984356 - G 74 -7.7 -4.09739 | gap 1, opp_overlap 2984362, overlap 2984345 2984357 CGAACGCCTTCAAAA GCCGCCTC AGC GAGGCG-C GGATTTTGGGTATAT sicA 2984923 - 2984426 - | surface presentation of antigens; secretory proteins spaS 2986131 - 2985061 - | surface presentation of antigens protein SpaS spaR 2986909 - 2986118 - | surface presentation of antigens; secretory proteins TERM 3886 2986239 - 2986251 + g 71 -4.7 -4.62783 | opp_overlap 2986240, overlap 2986240 AGCAGCATAATTAAA ACGGC AAT GCCGC TTTTTACCGTCAGTG TERM 3887 2986250 - 2986240 - G 83 -8.2 -4.51174 | opp_overlap 2986239 2986240 GCAGCATAATTAAAA CGGC AAT GCCG CTTTTTACCGTCAGT TERM 3888 2986847 - 2986834 - G 95 -3.1 -5.84381 | gap 1, overlap 2986835 GCAGGAAGAAAAAAA TCGGCG CCA CGC-GA GCAAACCCTAGCGCC spaQ 2987173 - 2986913 - | surface presentation of antigens; secretory proteins TERM 3889 2987124 - 2987072 - G 79 -11.4 -3.61715 | gap 1, overlap 2987073 TACCGTCTGGAATAA CCCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGGA TCAAAACAAGATAGA TERM 3890 2987123 - 2987073 - G 76 -12.7 -2.76815 | gap 1, overlap 2987072 ACCGTCTGGAATAAC CCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGG ATCAAAACAAGATAG spaP 2987873 - 2987199 - | surface presentation of antigens protein SpaP spaO 2988774 - 2987863 - | surface presentation of antigens protein SpaO TERM 3891 2988239 - 2988225 - G 71 -5.7 -4.24342 | TCGCGTAGCAATAAA CTTCC GCACG GGAAG TACGAATCAGGAGTA invJ 2989784 - 2988774 - | surface presentation of antigens; secretory proteins TERM 3892 2989251 - 2989268 + g 74 -6.9 -4.30719 | opp_overlap 2989250 GCCCTCTTTACGAAC GCCTTCG CCCG CGATGGC TTTATTATCCCCAGG TERM 3893 2989602 - 2989612 + g 71 -4.6 -4.59089 | TGCCGCCAGTAATAC CGGT AAA GCCG TTTCTTTATGCATTA invI 2990227 - 2989784 - | surface presentation of antigens; secretory proteins invC 2991500 - 2990205 - | ATP synthase SpaL TERM 3894 2990790 - 2990765 - G 72 -2.4 -4.91712 | overlap 2990766 TGGAATCGATAAAAA GCACGACCCG TTTTCC CTGGTCGCGA AAATATTCCGCTACG TERM 3895 2991431 - 2991451 + g 86 -7.5 -4.73105 | CCACATCGCGCAATT CCGCCTCAA TAA TTGGGCCGG TTATTTTTTGTGGGT invB 2991904 - 2991497 - | surface presentation of antigens; secretory proteins TERM 3896 2991657 - 2991641 - G 78 -12.3 -3.21099 | CTCCCCCAGTAGTAA TTGCCCG CCG CGGGCAA AATGGCATCCTTCCA invA 2993985 - 2991928 - | invasion protein TERM 3897 2993584 - 2993560 - G 73 -5.5 -4.55689 | opp_overlap 2993561, overlap 2993561 ACCATCCAGAGAAAA TCGGGCCGCGA CTT CCGCGACGCGT TCTGAACCTTTGGTA invE 2995128 - 2994010 - | invasion protein invG 2996813 - 2995125 - | invasion protein; outer membrane invF 2997571 - 2996810 - | invasion protein TERM 3898 2997370 - 2997358 - G 73 -5.5 -4.59853 | overlap 2997359 TTAACGGTCGAAAAA CCAGG TCT CCTGA TACTGGTGCGACAAC TERM 3899 2997412 - 2997428 + g 78 -6.5 -4.53034 | opp_overlap 2997385 AAAAAAGCAGCGCGC CTTCCTG AAT CAGGCAG TTTTCATTGTGTCGG TERM 3900 2998203 - 2998192 - g 71 -5.8 -4.29621 | TATAAACAAACCAAA GAGC AGGC GCTC ACCTTCTTCCAGGAA invH 2997916 - 2998359 + | invasion protein TERM 3901 2998511 - 2998529 + F 87 -10.3 -4.19311 | opp_overlap 2998498 2998513, overlap 2998513 ATCTGCTTTTTGATA CAGCAGC ACCTC GCTGCTG CTTTTTTTATTTGTG TERM 3902 2998513 - 2998530 + F 100 -7 -6.02919 | opp_overlap 2998498 2998513, overlap 2998511 CTGCTTTTTGATACA GCAGCA CCTCGC TGCTGC TTTTTTTATTTGTGA TERM 3903 2998804 - 2998791 - f 73 -4.5 -4.81685 | ATCAACCACCAAAAA GCTAC GCAA GCAGC ACACGCCTGAATTTC TERM 3904 2999168 - 2999192 + F 71 -10.1 -3.17274 | opp_overlap 2999162, overlap 2999166 2999164 2999187 ACTATATCAGCCTCA TATGTACGCCT TGA AAGCGTACATA TATGTATTATAATTG SC2833 2999241 - 2999522 + | putative ABC-type transport system TERM 3905 2999587 - 2999559 - g 90 -10.4 -4.2349 | CCGCGATAGGGAAAA CCCACAATCGAA TGAAT TTTGATTGTGGG GATGCCGATCTGAAC SC2834 2999519 - 3000046 + | putative acetyltransferase SC2835 3000295 - 3000119 - | putative cytoplasmic protein TERM 3906 3001299 - 3001309 + G 89 -3.2 -5.44119 | overlap 3001297 GGTTCTTTCTGTTCA GGCA ATC TGTC TTTTTTTAAAATAAA pphB 3000672 - 3001328 + | serine/threonine-specific protein phosphatase 2 SC2837 3002067 - 3001573 - | hypothetical protein SC2838 3002762 - 3002094 - | hypothetical protein TERM 3907 3002921 - 3002901 - R 74 -10.5 -3.25823 | GCTCCCGGAGATTAA TGAGAGACA TCC TGCCTCTCA CCGAAGACCAACCAC tnpA 3003322 - 3003185 - | hypothetical protein SC2840 3003747 - 3003337 - | hypothetical protein TERM 3908 3005115 - 3005100 - g 90 -4.6 -5.40072 | overlap 3005102 CGTTGCGTAAAAAAA TGGGCG ATTT CGCCGA GCTGCGCGACCTCCT mutS 3003905 - 3006472 + | DNA mismatch repair protein TERM 3909 3006513 - 3006474 - T 100 -17.2 -3.5394 | gap 1, opp_overlap 3006479 AAAGTCTGGTGTAAA CGTGTCGGGCCCGATAGCG CCG CGTTATCGGGCCC-ACGCG CCGGAACAGGCTTTT SC2842 3006908 - 3006528 - | hypothetical protein TERM 3910 3006758 - 3006748 - G 95 -8.2 -5.00616 | TGCGCCTGGAAAAAA GCGC CAA GCGC CGGATAATCTAGACA TERM 3911 3008038 - 3008028 - R 74 -6.8 -4.27617 | GACATCGCAGGAAAA GCCA CGC TGGC AATAAACAGATTAAT TERM 3912 3008206 - 3008182 - R 82 -13.1 -2.90075 | overlap 3008184 CGCGCTTCAACGATA TACTGTCAAAA TAA TTTTGACAGTA AAGGAGCTCGCCATG TERM 3913 3008204 - 3008184 - R 75 -11.3 -3.00298 | overlap 3008182 CGCTTCAACGATATA CTGTCAAAA TAA TTTTGACAG TAAAGGAGCTCGCCA TERM 3914 3008286 - 3008265 - R 72 -10.8 -2.87132 | TCGCCGTGGTAGATA GCGGCAGC TTCACG GCCGCCGC CGCCGCATCGGGCCA TERM 3915 3008650 - 3008687 + r 73 -11.1 -2.64107 | overlap 3008624 3008640 3008641 TGATGTGGCGATTCG GCTTGGCTCGCTGGCGG ACTC CCGCTATCGCGCCGCGC TGATATCCCGCTTTA SC2843 3010664 - 3009168 - | putative permease TERM 3916 3010575 - 3010541 - G 81 -12.9 -3.02144 | gap 1, overlap 3010543 CCATTCCCCCCAACA GACCGGCGATGCAGGC CGCC GCCAGCATCGC-GATC AGCGCATGAACACGG SC2844 3011611 - 3010661 - | putative nucleoside-diphosphate-sugar epimerase ygbM 3012427 - 3011651 - | hypothetical protein ygbL 3013070 - 3012432 - | putative aldolase TERM 3917 3012609 - 3012594 - G 78 -6 -4.75372 | ATTAGCCAGTAAAAA GGCCTG ATGC CGGGCC GCCAGCGCAGCCAAA ygbK 3014329 - 3013067 - | paral putative tRNA synthase ygbJ 3015246 - 3014323 - | 3-hydroxyisobutyrate dehydrogenase TERM 3918 3015353 - 3015339 - H 75 -2.9 -5.24129 | opp_overlap 3015339 TTGTTTCACAAAAAA TAACA AAATG TGTTA TTTTTTGTGAAGGCA TERM 3919 3015339 - 3015353 + H 75 -2.9 -5.24129 | opp_overlap 3015339 TTGTTTCACAAAAAA TAACA AAATG TGTTA TTTTTTGTGAAGGCA ygbI 3015443 - 3016207 + | DeoR family transcriptional regulator TERM 3920 3016233 - 3016205 - T 70 -2.4 -5.03314 | gap 1, opp_overlap 3016212, overlap 3016212 CTGATGGCCAAAAAA TAGCA-AAGCGGC GCAA GCCGCTTACGTCA TCATCTTGCGTACCA TERM 3921 3016212 - 3016225 + T 70 -9.5 -3.11459 | opp_overlap 3016212 3016205 CCAAAAAATAGCAAA GCGGC GCAA GCCGC TTACGTCATCATCTT TERM 3922 3016225 - 3016212 - T 83 -9.5 -4.18668 | opp_overlap 3016212, overlap 3016205 CCAAAAAATAGCAAA GCGGC GCAA GCCGC TTACGTCATCATCTT hcrR 3016630 - 3016226 - | putative transcriptional regulator pad 3016801 - 3017394 + | putative flavoprotein vdcC 3017394 - 3018821 + | hypothetical protein SC2853 3018832 - 3019086 + | hypothetical protein int 3019750 - 3019067 - | putative integrase protein TERM 3923 3019099 - 3019135 + g 100 -16.1 -3.54741 | opp_overlap 3019106, overlap 3019101 3019106 TGACAGTTTTTTGTC TGTAAAACGCCTGATGA ACA TCATCGGGCGTTTTGTA TTTCAGGGCCTGGTG TERM 3924 3019101 - 3019133 + g 100 -16.5 -3.35046 | opp_overlap 3019106, overlap 3019099 3019106 ACAGTTTTTTGTCTG TAAAACGCCTGATGA ACA TCATCGGGCGTTTTG TATTTCAGGGCCTGG TERM 3925 3019128 - 3019106 - G 91 -12 -4.07568 | opp_overlap 3019106 3019101 3019099 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG TERM 3926 3019106 - 3019128 + g 100 -14.2 -4.78848 | opp_overlap 3019106, overlap 3019101 3019099 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG SC2855 3020322 - 3019921 - | putative cytoplasmic protein TERM 3927 3020421 - 3020378 - R 95 -14.8 -3.56092 | opp_overlap 3020390, overlap 3020390 TCAGGACGGGTCAAA CGGTAAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTGACAA GGGTACTTACTCGCG TERM 3928 3020409 - 3020390 - R 100 -13.6 -5.82388 | opp_overlap 3020390, overlap 3020378 AAACGGTAAAAAAAA GGCCAGTC TGTC GACTGGCC TTTTTTTGACAAGGG TERM 3929 3020390 - 3020409 + r 100 -13.6 -5.40072 | opp_overlap 3020378 3020390 AAACGGTAAAAAAAA GGCCAGTC TGTC GACTGGCC TTTTTTTGACAAGGG rpoS 3021420 - 3020428 - | RNA polymerase sigma factor RpoS nlpD 3022604 - 3021483 - | lipoprotein NlpD TERM 3930 3021947 - 3021961 + g 73 -5 -4.6635 | overlap 3021938 CCGTCCCAGCAGGCT TGTTGT TTG GCAACA TTTTGTTAGCACTTT TERM 3931 3022414 - 3022429 + g 73 -5.4 -4.57073 | gap 1, overlap 3022417 3022421 ATTTGCGGCGCTTGT TGCGGCG TCG CGCC-CA TTTTTGGCGGCGGTG pcm 3023406 - 3022780 - | protein-L-isoaspartate O-methyltransferase TERM 3932 3022859 - 3022843 - G 77 -7.9 -4.33417 | overlap 3022844 GGTATCGATAATAAA TTCGCCG CCC CGGCGAC GCACGCGTTTCAAAA TERM 3933 3022858 - 3022844 - G 74 -11.4 -3.19568 | overlap 3022843 GTATCGATAATAAAT TCGCCG CCC CGGCGA CGCACGCGTTTCAAA surE 3024161 - 3023400 - | stationary phase survival protein SurE truD 3025191 - 3024142 - | tRNA pseudouridine synthase D TERM 3934 3024222 - 3024209 - G 77 -8.1 -4.07687 | ACGCTGGTGGCAAAA CTGCC TGCG GGCAG CCAGAAACGTAACTC TERM 3935 3024599 - 3024589 - G 74 -8.2 -4.01158 | overlap 3024590 AATTTGATTAAACAA CGCG CTA CGCG CCGCCGACAACCAAA TERM 3936 3024633 - 3024646 + g 71 -9.5 -3.51232 | overlap 3024630 TGCGTTTATTGCGAT CGCGC ACCG GCGCG TTACTTTGCGCCCAG ispF 3025667 - 3025188 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 3026377 - 3025667 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 3937 3025986 - 3026000 + g 70 -7 -4.21194 | opp_overlap 3025986, overlap 3025969 3025988 GGACTGGCGAGGATA CCGCCG ACC CGGCTG TTTTCGCTGATGGCC ftsB 3026707 - 3026396 - | cell division protein FtsB TERM 3938 3026814 - 3026786 - R 74 -10.3 -3.29144 | opp_overlap 3026786 3026787, overlap 3026787 GGATTGCCGCGACAA CGCCGGCAAATGT ACC ACATTTGCCGGAT GTTACGTATACCCGA TERM 3939 3026786 - 3026815 + r 81 -12.3 -3.12351 | gap 1, opp_overlap 3026786 3026787, overlap 3026787 GGATTGCCGCGACAA CG-CCGGCAAATGT ACC ACATTTGCCGGATG TTACGTATACCCGAG TERM 3940 3026787 - 3026813 + r 86 -13.8 -3.12327 | opp_overlap 3026786 3026787, overlap 3026786 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 3941 3026813 - 3026787 - R 83 -13.8 -2.57344 | opp_overlap 3026787 3026786, overlap 3026786 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 3942 3026937 - 3026922 - R 76 -8.2 -4.15698 | TAGCCATATAAATAA CGCGCC GAAT AGCGCG CCTACCGCCAGTAGA ygbE 3027254 - 3026898 - | hypothetical protein SC2865 3027877 - 3027272 - | adenylylsulfate kinase TERM 3943 3027814 - 3027785 - G 79 -12.9 -2.90813 | gap 1, opp_overlap 3027787, overlap 3027782 3027787 GAGTCCGGTAAACCA CAGCACCAC-GCCA CGG TGGCCGTGGAGCTG TTCACGGGCGGCGAC cysN 3029303 - 3027864 - | sulfate adenylyltransferase subunit 1 TERM 3944 3028101 - 3028049 - G 70 -2.8 -4.82901 | gap 2, opp_overlap 3028057, overlap 3028052 3028053 GTCGGTCGATAAAAA TCAGCCCGCCCGTCACCGGATTTT GCTGATA AATATCCAGCG-CGAGC-GGCTCA TCGAATGTCATCTCC TERM 3945 3028439 - 3028423 - G 71 -5.8 -4.26076 | overlap 3028432 TTATCGCCATCAAAA GTGACG ATACG CGCCAC GCTGGATTCCACGCC cysD 3030221 - 3029313 - | sulfate adenylyltransferase subunit 2 iap 3030472 - 3031518 + | alkaline phosphatase isozyme conversion aminopeptidase TERM 3946 3031537 - 3031560 + T 78 -6.6 -4.60255 | overlap 3031539 GCTGGTGAAACGTGT TTATCCCCGC TGAC GCGGGGAACA TTTTTCAGCCCTTGT ygbF 3032195 - 3031902 - | hypothetical protein ygbT 3033115 - 3032195 - | putative cytoplasmic protein TERM 3947 3032490 - 3032479 - G 91 -7.2 -5.00611 | CATAAACAAAAGAAA GCGG CTTA CCGC TATGGATAAAACCGA ygcH 3033762 - 3033112 - | putative cytoplasmic protein ygcI 3034490 - 3033744 - | putative cytoplasmic protein TERM 3948 3034282 - 3034264 - G 74 -11.6 -3.29511 | overlap 3034265 TGCACCGTGTGATAA TCCCGCGC CCA GCGCGGGT TGCCACTGGCGCGCA TERM 3949 3034281 - 3034265 - G 83 -15.1 -2.57564 | overlap 3034264 GCACCGTGTGATAAT CCCGCGC CCA GCGCGGG TTGCCACTGGCGCGC yghJ 3035559 - 3034501 - | putative cytoplasmic protein TERM 3950 3034985 - 3034973 - G 79 -7.7 -4.52345 | opp_overlap 3034973 ACAGCAGTAAAGAAA TCGTC TTC GACGA TCGTTTCGCTGACGC tnpA 3036121 - 3035573 - | putative transposase TERM 3951 3036316 - 3036328 + H 71 -6.9 -4.12188 | ATTCAGCCTTTCGTC CGGCT TGT GGCCG TTTTCCAGATCGTGG TERM 3952 3039642 - 3039663 + H 76 -4.3 -5.02074 | opp_overlap 3039658 TTAGCGAGAGCTTGC TGCCAGTAG GTAT CAACAGGCA TTTTTTCCGCAGTAC SC2875 3040429 - 3040680 + | hypothetical protein sopD 3040796 - 3041749 + | hypothetical protein TERM 3953 3041779 - 3041795 + T 89 -9.4 -4.72272 | opp_overlap 3041779 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTTCATAGCAGCA TERM 3954 3041795 - 3041779 - T 83 -9.4 -4.32804 | opp_overlap 3041779 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTTCATAGCAGCA cysH 3042571 - 3041837 - | phosphoadenosine phosphosulfate reductase cysI 3044358 - 3042619 - | sulfite reductase subunit beta cysJ 3046157 - 3044358 - | sulfite reductase subunit alpha ptpS 3046581 - 3046943 + | putative synthase SC2881 3047830 - 3047033 - | beta-lactamase family hydrolase SC2882 3047938 - 3048339 + | putative cytoplasmic protein TERM 3955 3049161 - 3049125 - g 100 -16.1 -3.54741 | opp_overlap 3049132, overlap 3049127 3049132 CACCAGGCCCTGAAA TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA GACAAAAAACTGTCA TERM 3956 3049159 - 3049127 - g 100 -16.5 -3.35046 | opp_overlap 3049132, overlap 3049125 3049132 CCAGGCCCTGAAATA CAAAACGCCCGATGA TGT TCATCAGGCGTTTTA CAGACAAAAAACTGT TERM 3957 3049132 - 3049154 + G 91 -12 -4.07568 | opp_overlap 3049132 3049127 3049125 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA TERM 3958 3049154 - 3049132 - g 100 -14.2 -4.78848 | opp_overlap 3049132, overlap 3049127 3049125 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA int 3048510 - 3049193 + | putative integrase protein TERM 3959 3049522 - 3049484 - T 78 -5.9 -4.79223 | gap 1, overlap 3049486 GGAGATGATCAAAAA TGGCGGTTTAT-CCCCGC TGGC GCGGGGAACACTGCGCCA CGCCTATACCATCCG TERM 3960 3049818 - 3049828 + T 89 -4 -5.67283 | opp_overlap 3049818 TTGATGCAAAAAAGT TCAT AGA ATGA TTTTTTCTTTAAATT ygcF 3050666 - 3049995 - | hypothetical protein TERM 3961 3050069 - 3050081 + g 80 -9.1 -4.09519 | opp_overlap 3050069 ACGTTTCAATACACA GACGC GTC GCGTC TTCTTTCTGGCTAAT TERM 3962 3050613 - 3050597 - G 78 -2.2 -5.24551 | GTAAACGAATAAAAA TAGCGG GGACG CCGGTA AAATAACCCTCGCCT SC2885 3050799 - 3050650 - | hypothetical protein TERM 3963 3050761 - 3050774 + g 95 -9.5 -4.74103 | opp_overlap 3050761 ACAGATACAAAAAAA CCCGC CGAA GCGGG TTTTTACATTAAGAG TERM 3964 3050774 - 3050761 - G 100 -9.5 -5.77988 | opp_overlap 3050761 ACAGATACAAAAAAA CCCGC CGAA GCGGG TTTTTACATTAAGAG eno 3052100 - 3050802 - | phosphopyruvate hydratase TERM 3965 3052168 - 3052145 - R 100 -13.9 -4.08164 | opp_overlap 3052143 3052142 AAAACTTCAGACAAA CGGTGCACC GCTGAG GGTGCACCG CCGTTCTAACTTTTT pyrG 3053820 - 3052183 - | CTP synthetase mazG 3054848 - 3054048 - | nucleoside triphosphate pyrophosphohydrolase TERM 3966 3054446 - 3054461 + g 87 -8.2 -4.57073 | overlap 3054449 3054455 GCGGAATATCGTCCA GCGCGG AATG CTGCGC TTTTTGCGCGCGCTC TERM 3967 3055204 - 3055224 + H 85 -3.4 -5.60993 | CGCCAGTTTAATATT CAAAAAAG ACCAC TTTTTTTG TTTTTTTCTGGAACA stfA 3055456 - 3056043 + | putative fimbrial subunit steB 3056123 - 3058822 + | outer membrane usher protein TERM 3968 3058855 - 3058871 + GF 73 -10.9 -2.57067 | overlap 3058858 3058861 3058870 CAAGACCAACCATTT TAAGCGC CAG GCGCTTA TCGCTTCGGTATTAC TERM 3969 3058994 - 3058984 - gf 71 -4.6 -4.59773 | overlap 3058985 CGTCACGCTGAAAAA CGGC AAC GCCA CTCTGCCCTACCTCG stfD 3058835 - 3059608 + | putative periplasmic fimbrial chaperone stfE 3059580 - 3060134 + | putaive minor fimbrial subunit stfF 3060134 - 3060619 + | putative minor fimbrial subunit yfcP 3060616 - 3061152 + | fimbrial subunit SC2895 3061207 - 3062031 + | hypothetical protein relA 3064822 - 3062588 - | GDP/GTP pyrophosphokinase TERM 3970 3063728 - 3063745 + g 77 -8.3 -4.1523 | opp_overlap 3063727, overlap 3063726 ATGACCGGAACGCAC GCCGCCG GACG CGGCGCC TTCTTTATACTTCCA TERM 3971 3064867 - 3064841 - R 73 -10.9 -2.52464 | gap 1, opp_overlap 3064838 CCTCTCCTTAAGGGA CCAGGCCTACCG AAGT CGGTAAGCC-GG TAATCATTACATGCG rumA 3066169 - 3064874 - | 23S rRNA 5-methyluridine methyltransferase TERM 3972 3066767 - 3066778 + G 85 -2.2 -5.47159 | AGATTTTTATCTCCA GCGT GATG ATGC TTTTTTGTATTGGCA TERM 3973 3067098 - 3067077 - g 71 -4.3 -4.57569 | opp_overlap 3067078, overlap 3067078 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAGTCGGAGTTC barA 3066226 - 3068982 + | hybrid sensory histidine kinase BarA grk 3070168 - 3069026 - | hypothetical protein TERM 3974 3070241 - 3070216 - R 90 -13.3 -3.54436 | opp_overlap 3070219, overlap 3070219 CATACACCCAGAGAA GCACCGGTTCC TTAC GGAACCGGTTC TGACTTAACGCACCA TERM 3975 3070219 - 3070238 + r 90 -13.6 -3.41878 | opp_overlap 3070216 3070219 ACACCCAGAGAAGCA CCGGTTCC TTAC GGAACCGG TTCTGACTTAACGCA TERM 3976 3070238 - 3070219 - R 84 -13.6 -2.90061 | opp_overlap 3070219, overlap 3070216 ACACCCAGAGAAGCA CCGGTTCC TTAC GGAACCGG TTCTGACTTAACGCA gudD 3071586 - 3070246 - | d-glucarate dehydratase TERM 3977 3071691 - 3071703 + r 76 -4.7 -4.84359 | TGCATCATTACGCGC GCCGC CTG GCAGC TTTTTATACGCGTCA TERM 3978 3071777 - 3071790 + r 91 -8.1 -4.98531 | CTGGCGCATCCGGAA CGGCA ATTT TGCCG TTTTTAATTTCCAGC TERM 3979 3072236 - 3072275 + r 83 -4.1 -5.40072 | CATCCAGTAGCCAGG CGCCGTTCGGATCCACG GTAATA CGTGCGTCCGGGAAGCG TTTTTTTAGCGCGCG TERM 3980 3072885 - 3072908 + r 70 -10.4 -2.56728 | gap 1, opp_overlap 3072883, overlap 3072884 GTTGAGTAGCATACT GTCATGTCCGG CAA CCGGA-ATGAC CTTCATGTCCGTAAT gudT 3074302 - 3072944 - | MFS superfamily, D-glucarate permease TERM 3981 3074007 - 3073995 - G 85 -9.1 -4.46757 | AAGATATCGACAAAA CCCTG CAA CAGGG TGAAGACTGACCAAA TERM 3982 3074468 - 3074456 - g 76 -3.3 -5.01535 | GGAGAAGTATAAAAA GCGCG CCA CACAC ACTCACCGTGCAACA SC2902 3074382 - 3074633 + | hypothetical protein TERM 3983 3074775 - 3074756 - T 72 -10.7 -2.82666 | opp_overlap 3074755 3074756, overlap 3074753 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA TERM 3984 3074756 - 3074775 + T 72 -10.7 -2.78679 | opp_overlap 3074756 3074753, overlap 3074755 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA yqcA 3075232 - 3074783 - | flavodoxin yqcB 3076033 - 3075251 - | tRNA pseudouridine synthase C yqcC 3076419 - 3076033 - | hypothetical protein TERM 3985 3076287 - 3076264 - G 89 -13.2 -3.53012 | gap 1 TTGGGTGCTGGTAAA CAGG-TGCGCC TGC GGCGCATCCTG CCGCCAGTGGCGATG TERM 3986 3076410 - 3076439 + g 74 -10.7 -3.51411 | opp_overlap 3076412, overlap 3076406 3076411 AAGAATAACAAAAAA AAGGGAGCACTGT ATAA ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 3987 3076411 - 3076438 + g 83 -14.2 -2.70525 | opp_overlap 3076412, overlap 3076410 3076406 AGAATAACAAAAAAA AGGGAGCACTGT ATAA ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 3988 3076437 - 3076412 - G 100 -17.7 -6.22691 | opp_overlap 3076411 3076410 3076406 GAATAACAAAAAAAA GGGAGCACTGT ATAA ACAGTGCTCCC GGTTCGTTTCGCAGC TERM 3989 3076909 - 3076894 - R 73 -4 -4.84914 | gap 1, opp_overlap 3076900 ACTTACATAAGAAAA CGGA-AC TCA GTATCCG CTGATATCCTAGCGA syd 3077519 - 3076974 - | SecY interacting protein Syd queF 3077588 - 3078436 + | 7-cyano-7-deazaguanine reductase TERM 3990 3079280 - 3079269 - g 72 -3.6 -4.70659 | CCGGATATCGAAAAA CGCC TGGA AGCG TTCGTCCGTATCGCA TERM 3991 3079582 - 3079565 - g 71 -8.4 -3.86372 | GCAAGTGAAAGAGAA TCGCCG CGATAC CGGCGA CGCCTATAGTTTTAA ygdH 3078549 - 3079913 + | hypothetical protein TERM 3992 3079919 - 3079947 + F 77 -10.2 -3.3858 | overlap 3079920 3079942 CTGCGCTTAGCGCTT ATGCCCGGTTGC CGCCA GCAGCCGGGCGC TTCTCCCATTCCTTT TERM 3993 3079920 - 3079946 + F 83 -13.7 -2.62425 | overlap 3079919 3079942 TGCGCTTAGCGCTTA TGCCCGGTTGC CGCCA GCAGCCGGGCG CTTCTCCCATTCCTT sdaC 3080478 - 3081767 + | HAAAP family, serine transport protein TERM 3994 3081776 - 3081794 + F 90 -13.1 -3.61902 | CAGCTAAGTCCTTTA GCGCCGC TTACC GCGGCGC TTCTCTATGATACAA TERM 3995 3081933 - 3081898 - g 83 -10.4 -3.95584 | opp_overlap 3081897 GTCGGACCAATGAAA GCAGGCAAGCAGTTCA CGGA CGATCTGATTGCCCGC CATATTCTTACAGAT TERM 3996 3082452 - 3082432 - g 86 -11.9 -3.83026 | overlap 3082435 GCTCTGCACAGTAAA GAAGCGCTG GAG CAGCACTTC GCCAGGGTCTGGGAG TERM 3997 3082449 - 3082435 - g 71 -7.8 -4.04806 | overlap 3082432 CTGCACAGTAAAGAA GCGCTG GAG CAGCAC TTCGCCAGGGTCTGG TERM 3998 3082605 - 3082581 - g 95 -14.3 -3.4252 | GGTCAGTCAGGATAA GACCACCACCG ATC CGATGGCGGTC GTCGACTGGATCAAT sdaB 3081826 - 3083193 + | L-serine dehydratase (L-threonine deaminase 2) TERM 3999 3083220 - 3083248 + F 82 -7.5 -4.69053 | gap 2, opp_overlap 3083229, overlap 3083232 3083237 TTTTAGGATCTGTAA GCCGGATAAGGCG CTCGC CGCC--ATCCGGC TTTTGTTGCCTGATG xni 3083304 - 3084119 + | exonuclease IX TERM 4000 3084102 - 3084119 + T 74 -5.5 -4.63932 | opp_overlap 3084096 GGAAACTTACAGCAG CTACGGC TGGC GCGGTAG TTTTGTTGCCGGATG fucO 3085353 - 3084211 - | L-1,2-propanediol oxidoreductase TERM 4001 3084506 - 3084494 - G 77 -7.7 -4.2558 | TACCCGGCATTAAAA CGCAT CAC ATGCG GAAGCAAAATAGCAT fucA 3086017 - 3085370 - | L-fuculose phosphate aldolase TERM 4002 3085553 - 3085573 + g 76 -9.7 -3.8046 | overlap 3085560 3085561 ACAAGCGATAAGCCC GTGATGCTG TAA CAGCGTCGC TTTACGATTTTTAAG SC2914 3086338 - 3086171 - | hypothetical protein TERM 4003 3086763 - 3086779 + G 74 -2.9 -4.94962 | CTAACTTTCAGGCCG GGCTTAT TCA GTCAGCC TTTTATTTCGGTTAT TERM 4004 3086809 - 3086819 + G 74 -6.8 -4.25104 | overlap 3086814 TTTCGTCATTCCAAT TCCC GCT GGGA TTTTGATGAAAAAAC fucP 3086573 - 3087889 + | L-fucose transporter TERM 4005 3087942 - 3087931 - g 85 -2.2 -5.52384 | overlap 3087932 3087934 CTGTCATGAAAAAAA TCAG CTTA CCGA AAATCGGTATCCGCC TERM 4006 3088416 - 3088395 - g 74 -2.2 -5.07486 | gap 1 GACGTCGAAGAAAAA CTG-CTGCG TTTTG CGCGGGCAG GGTTAGCGGTAGCCA TERM 4007 3088647 - 3088631 - g 70 -3 -4.82901 | gap 1 GTGGGCGGATAAAAA CTTCTGC TACG GC-GAAG ATCAGAACGCCTCGC fucI 3087921 - 3089696 + | L-fucose isomerase fucK 3089797 - 3091215 + | L-fuculokinase TERM 4008 3091515 - 3091543 + G 71 -5.9 -4.36914 | TAGAAGCGCCGTGCC CGGATATCGTTCG TAT CGACCGCTATGCG TTTTATGAGCGGGCG fucU 3091217 - 3091639 + | fucose operon protein TERM 4009 3091635 - 3091625 - f 76 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CGCC GTAATCTCTTGCCGG TERM 4010 3091653 - 3091671 + F 83 -13.1 -3.17212 | AATCTCTTGCCGGTG CGCCCGC ATGAC GCGGGCG TTCATCGAATGATGG fucR 3091697 - 3092407 + | DNA-binding transcriptional activator FucR TERM 4011 3092416 - 3092462 + T 100 -10.9 -4.88736 | gap 2, opp_overlap 3092417, overlap 3092417 GTCATAGGCCGGATA AGCG-TGC-GCCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGCG TTTTTATCGCTCGTC TERM 4012 3092461 - 3092417 - T 100 -16.6 -3.30771 | gap 2, opp_overlap 3092416 3092417 TCATAGGCCGGATAA GCG-TGC-GCCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT TERM 4013 3092417 - 3092461 + T 95 -14.4 -3.52519 | gap 2, opp_overlap 3092417, overlap 3092416 TCATAGGCCGGATAA GCG-TGC-GCCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT ygdE 3093566 - 3092466 - | putative RNA 2'-O-ribose methyltransferase ygdD 3093954 - 3093559 - | hypothetical protein TERM 4014 3093926 - 3093914 - G 100 -9.1 -4.94058 | overlap 3093916 GCAACGTAAATAAAA CCGCT GAT AGCGG CGACAATCAGCATAA gcvA 3094890 - 3093973 - | DNA-binding transcriptional activator GcvA TERM 4015 3094330 - 3094346 + g 83 -7.9 -4.67168 | overlap 3094345 CAATAGCGTGTGTTT CGCCAGA TCT TCCGGCG TTTTTAACGGTTTTT TERM 4016 3094864 - 3094854 - G 74 -4.6 -4.77036 | opp_overlap 3094854 CGGCAGCATCAAAAA CGCG TAA CGCA TTTAAAGGAGGTAAT TERM 4017 3094922 - 3094950 + r 100 -7.5 -5.58454 | opp_overlap 3094922 3094926 GTCGAATGAATTTAA CAAATAGGTAACA ACA TGTAACCTATTAG TTTTTTTAATCTGAG TERM 4018 3094946 - 3094926 - R 74 -6.9 -4.26953 | opp_overlap 3094922, overlap 3094922 AATGAATTTAACAAA TAGGTAACA ACA TGTAACCTA TTAGTTTTTTTAATC TERM 4019 3095207 - 3095188 - R 70 -10.7 -2.57423 | opp_overlap 3095188 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC TERM 4020 3095188 - 3095207 + r 100 -10.7 -6.02914 | opp_overlap 3095188 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC ygdI 3095456 - 3095229 - | putative lipoprotein TERM 4021 3095910 - 3095896 - g 78 -2.1 -5.14563 | CGCCCGATGAAAAAA GTATC GTCTG GACAC GCGGCACCACCGAAG TERM 4022 3096579 - 3096599 + G 74 -8.1 -4.00348 | opp_overlap 3096578, overlap 3096586 ACGCTGGCGGAAGAC GCACTGGCG AAA CGCCCGGGC TTTCGTTCGTTCCGC csdA 3095649 - 3096854 + | cysteine sulfinate desulfinase ygdK 3096854 - 3097297 + | hypothetical protein TERM 4023 3097812 - 3097832 + G 76 -3.3 -4.99645 | GATCGCCGGACTTTT GATGATTGT ATC ATGGTCATC TTTTATTTATGCGCT rarD 3097570 - 3098484 + | hypothetical protein ygdL 3099342 - 3098536 - | hypothetical protein TERM 4024 3099039 - 3099052 + g 71 -9.5 -3.51708 | overlap 3099036 CATCGATAACCGTTA CCCGG CACT CCGGG TTAATTTGCCGAATC TERM 4025 3099249 - 3099273 + g 78 -7 -4.59773 | opp_overlap 3099248 CCACGACGCAGATAT GCGCCTCAGC AAACC GCTGCAGCGC TTTTTCACCGTACAG TERM 4026 3099381 - 3099363 - R 100 -10.3 -5.88565 | CTCAGAATAAAAAAA GGTGAGG TTATT CCTCACC CCTGCTCACTATTTT TERM 4027 3099474 - 3099486 + r 78 -6.2 -4.56597 | opp_overlap 3099455 3099466, overlap 3099466 CTAAACACGTTACCG GCGC CCGGA GCGC TTTTTAACACCCAGA mltA 3100549 - 3099452 - | murein transglycosylase A TERM 4028 3100090 - 3100111 + g 77 -8 -4.08945 | gap 1 CTGCGTAGATCTGAG CGCGGGACG GTAAG CGTCC-GCG TTTTGGCGGCATACT TERM 4029 3100460 - 3100477 + g 84 -9.1 -4.25104 | CCCGTCCTTATATTG CTGACCG CGAT CGGTCGG TTTTGATGAACAGGC TERM 4030 3100950 - 3100963 + r 100 -8.1 -5.77988 | opp_overlap 3100950 AACCAATTTAATGAA CACCC TTAC GGGTG TTTTTTTGTATCTGT amiC 3102302 - 3101049 - | N-acetylmuramoyl-L-alanine amidase TERM 4031 3101661 - 3101677 + g 72 -3.7 -4.80455 | GGCTATCTGGAGCAC CACGT CTTTTTC ACGTG TTTTGTATTTGCCTA TERM 4032 3102452 - 3102440 - H 78 -5.5 -4.73613 | GCATTACTAAGAAAA GCGAT CGG ACCGC ATAAAATTTACGCTT argA 3102535 - 3103866 + | N-acetylglutamate synthase TERM 4033 3103947 - 3103935 - T 70 -9.1 -3.30124 | TTGGAGGCCGGATAA GACGC TAC GCGTC GCCATCCGGCGAGAA RecD 3105804 - 3103969 - | exonuclease V subunit alpha TERM 4034 3104948 - 3104928 - G 76 -3.2 -5.07486 | gap 1, overlap 3104931 3104932 GATCGCCAAGAAAAA TGAC-CCGC CCGT GCGGCGGCA GAGCGTCAATCAAAC TERM 4035 3105459 - 3105442 - G 76 -3.3 -5.01732 | opp_overlap 3105442, overlap 3105444 AACCTCGTTAAAAAA GCGCGCA ACCG TACGCTC GTTGCACCACATGCG RecB 3109346 - 3105801 - | exonuclease V subunit beta TERM 4036 3107311 - 3107328 + g 70 -6.9 -4.11371 | AGCCGACGTTCGCCT CCCGCTG TCGC CAGCAGG TTTTCAGCAATATTG TERM 4037 3107772 - 3107799 + g 71 -11.4 -2.87051 | overlap 3107771 CAGCCAGTCGCGAAT TTGTGTGGCGCA CACC TGCGCCATATAA CTTTGATAATCGCCC TERM 4038 3108305 - 3108317 + g 100 -10.5 -4.72272 | opp_overlap 3108297, overlap 3108299 CGTCAAACCCCAGCT CGCCG CGC CGGCG TTTTTCCTGAGCCAC TERM 4039 3108428 - 3108449 + g 83 -12.3 -3.74693 | gap 1 CGACAAACAATGGGT GCTGG-GGCG TCA CGCCGCCAGC TTTGGTGCGCTCAGC TERM 4040 3108493 - 3108472 - G 82 -5.1 -5.08824 | opp_overlap 3108487, overlap 3108484 CGCTCAGCTAAAAAA CGCTGTGAA AATT TTCCCAACG CCTCGGGTAATTGAT TERM 4041 3108826 - 3108798 - G 70 -8.8 -3.63627 | gap 1 CTTCCACACGTCAAA CACCACCTGCGCG ATGT CGCGC-GGCAGCG GATAGCAATGACGCC TERM 4042 3109313 - 3109291 - G 71 -8.4 -3.90588 | GATGCTTCAATCAAA CGCTCGCC TGTAAGG GGCAAGCG CAGAGGATCAAGAGT ptr 3112227 - 3109339 - | protease III TERM 4043 3110045 - 3110061 + g 71 -4.3 -4.62302 | opp_overlap 3110038 3110035, overlap 3110047 CGACACCACGCCGAT CCGTTCG CCG CGAGCTG TTTTTGGACATCTTG TERM 4044 3110886 - 3110896 + g 81 -6.8 -4.72272 | TCTGCGGCGTCATCA TCGC CAG GCGA TTTTTGATAGCGGCA TERM 4045 3111912 - 3111927 + g 100 -7.6 -5.40474 | overlap 3111903 GGTATTCGGCAAGGC TATCCG CCTG CGGATA TTTTTTTGACCCCAT recC 3115776 - 3112405 - | exonuclease V subunit gamma TERM 4046 3113665 - 3113676 + g 72 -3.6 -4.68593 | overlap 3113632 GCGACGGCTACGATC CCCG CGCA TGGG TTTTTGGCTCATCAG TERM 4047 3114498 - 3114474 - G 72 -12.1 -2.60823 | overlap 3114478 AAATGGCATAAGGCA GATAGCGCTCC GTT GGCGCGCTACC AAATACCGCCTGGAT TERM 4048 3114804 - 3114820 + g 70 -6.5 -4.19506 | opp_overlap 3114803 3114804 3114806, overlap 3114807 TAATATCAACAAACG CATCCAG TTC CTGGCTG TTTTCCAGTTCAGAT TERM 4049 3115605 - 3115595 - G 74 -6.8 -4.27316 | GCCGGTAACGGAAAA GCGA TAT TCGC CGCAATACCAAACTT ppdC 3116112 - 3115792 - | hypothetical protein ygdB 3116504 - 3116097 - | hypothetical protein ppdB 3117064 - 3116501 - | hypothetical protein ppdA 3117525 - 3117055 - | hypothetical protein TERM 4050 3117231 - 3117199 - G 83 -14.9 -2.77569 | overlap 3117191 3117190 3117224 AAAGAAGGCTAACGA CGGCGTGATATCGGC AAG GACGACATCACGCCA GTCGGGCGTAAACAC TERM 4051 3117688 - 3117669 - R 93 -7.1 -5.81032 | opp_overlap 3117669 GAAGGGTAAAAAAAA CCGACGC GCAATG ACGTCGG TTATGGCAGGATCGT thyA 3118504 - 3117710 - | thymidylate synthase TERM 4052 3118082 - 3118061 - G 76 -5.1 -4.75063 | gap 1, opp_overlap 3118070 3118071 ATAAAACTGGAAAAA GGCG-TGACA CGG CGCCAACGCC ATCTTATCCAGCTCG lgt 3119386 - 3118511 - | prolipoprotein diacylglyceryl transferase TERM 4053 3119012 - 3119001 - G 71 -4.4 -4.64334 | AACGGCGCAATAAAA TCAG ACAC CTGA AAGAACGAGCGCTTC TERM 4054 3119460 - 3119436 - R 70 -9.2 -3.37354 | overlap 3119425 GATAGCGATTGATAA GCGCGCCTGC GCGTT GCAGACGCTC CAAAGGTGCGAATAA ptsP 3121848 - 3119602 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein TERM 4055 3121160 - 3121128 - G 71 -6.1 -4.26589 | opp_overlap 3121155 3121157 AGTACAGATCGAAAA TGGCCGCCGTCTC TTTTTGC GCGCCGGCGGCAA AGCGTTTGCTGTATC ygdP 3122391 - 3121861 - | dinucleoside polyphosphate hydrolase mutH 3123074 - 3123769 + | DNA mismatch repair protein TERM 4056 3124311 - 3124299 - g 71 -7.7 -3.97139 | opp_overlap 3124298 GAAGGCGAAGAAGAA GGGTT AAA AACCC GGGTTTCTTCTTTCC ygdQ 3123951 - 3124664 + | hypothetical protein TERM 4057 3124669 - 3124697 + F 84 -14 -2.82263 | gap 1, overlap 3124666 ATCCGCTGTAATCCT GT-TTCGCTCCCC CGCC GGGGAGCGAATAC TCACTTTATTTCCTT ygdR 3124834 - 3125052 + | POT family peptide transport protein TERM 4058 3125333 - 3125323 - g 71 -4.6 -4.63486 | overlap 3125325 ATTTGGTGAACAAAA CAGC GAA GCCG ACGCTCACGCACAGC tas 3125243 - 3126283 + | putative aldo-keto reductase ygeD 3127572 - 3126370 - | hypothetical protein TERM 4059 3126883 - 3126866 - G 79 -7.7 -4.49311 | gap 1, overlap 3126870 AGCACCAGCAGAAAA CGCA-GCG TCA CGCCTGCG CCCCAGAATAGCCCG aas 3129724 - 3127565 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 4060 3127966 - 3127976 + g 77 -8.2 -4.07568 | ACCCGCGCTCGGTTT CGCC TCT GGCG TTTTCCGCCGACGGC TERM 4061 3128697 - 3128713 + g 91 -11.5 -4.28254 | ATCCACAGCTTGTCG GCGGGCG TGA CGTCCGC TTTTAAATCTTCCAG TERM 4062 3129823 - 3129840 + H 81 -12.7 -3.14132 | opp_overlap 3129823 AGGTTCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4063 3129840 - 3129823 - H 100 -12.7 -5.75945 | opp_overlap 3129823 AGGTTCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4064 3130043 - 3130024 - H 100 -10 -6.23545 | opp_overlap 3130024 GCGAAACAAAAAAAA CCTGCGCA TCTC TACGCAGG TTGGTGTAATTCGTG TERM 4065 3130419 - 3130397 - gH 89 -11.2 -4.10429 | AACGATTCGCCAAAA GCCAGCGAGG CGT CCCGGCTGGC GGTGACCAGCGCAAT galR 3130316 - 3131344 + | DNA-binding transcriptional regulator GalR TERM 4066 3131478 - 3131449 - gT 74 -4.3 -4.68908 | gap 1 GGCAGGTAAAAGAAA GCACGCGCCAGAAA GTG TTTACGGCG-ATGC AGGCTCTGGACTATC TERM 4067 3131589 - 3131615 + GT 70 -10 -3.05384 | TATTTCGGCAGTTTG TTGCGCCGGGCG TCG CGCCAGGCGGAG TTGCATAACAAGCAG TERM 4068 3132335 - 3132356 + GT 84 -5.7 -5.03314 | CACGCTGATTCTGCG CGAGTCCGT CGCC GCGGGCCCG TTTTTTCAACGTCCG SC2951 3131265 - 3132377 + | putative transcriptional regulator lysA 3133649 - 3132387 - | diaminopimelate decarboxylase lysR 3133767 - 3134702 + | DNA-binding transcriptional regulator LysR ygeA 3135354 - 3134674 - | putative racemase araE 3136912 - 3135494 - | major facilitator superfamily L-arabinose: proton symporter TERM 4069 3136073 - 3136063 - G 78 -6.8 -4.62069 | overlap 3136046 CGGCCATTTTAAAAA TGCG CGG CGCA TAGTACATAATGATG TERM 4070 3137204 - 3137187 - R 93 -7 -5.69473 | opp_overlap 3137186 3137187 GAGATCATAAAAAAA CCCTGT ACCAGG ACAGGG CTTTATCAGCTTTTC kduD 3138026 - 3137265 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 4071 3137876 - 3137854 - G 76 -2.7 -5.03715 | overlap 3137857 ATCAGGCTTAAAAAA CGACGTC-CCA GAG CGGTGACG-CG CGCAATAGTTTCCGT kduI 3138919 - 3138083 - | 5-keto-4-deoxyuronate isomerase TERM 4072 3138959 - 3138975 + r 81 -8.1 -4.41616 | opp_overlap 3138959 CGCAATGGCATAAAA TCAAAAC ACT GTTTTGA TTTATTTAACGGCAT TERM 4073 3138975 - 3138959 - R 81 -8.1 -4.42788 | opp_overlap 3138959 CGCAATGGCATAAAA TCAAAAC ACT GTTTTGA TTTATTTAACGGCAT TERM 4074 3139284 - 3139301 + r 88 -8.4 -4.83169 | TCTGTCACTGGCTTT GCCCTC GTGATA GAGGGC TTTTTATGACGGAAT yqeF 3140527 - 3139349 - | acetyl-CoA acetyltransferase TERM 4075 3139710 - 3139697 - G 71 -9.5 -3.54424 | overlap 3139698 GCCGACGCTGGCAAA CGCGC GGAT GCGCG CCAGCACCGGCAGCC TERM 4076 3139862 - 3139826 - G 71 -8.6 -3.89412 | gap 1, opp_overlap 3139855 ACCTAAACTATCAAA CGCCGGATGCAGCAGGG CTAA CCCCTCCGCA-CTGGCG TCGGCCCGCGGTTGT TERM 4077 3140615 - 3140602 - R 76 -2.4 -5.41143 | GATTGTTTAAAAAAA GTGA ATTTTA TCAC AAAGGAAATGACGCT SC2959 3140997 - 3140650 - | LysR family transcriptional regulator TERM 4078 3140758 - 3140772 + g 73 -5.6 -4.59773 | overlap 3140760 CCAGCCAGGAACATC CAGCTG CGC CAGCGG TTTTTCCGCCTCAAA SC2960 3141045 - 3141281 + | putative inner membrane protein yqeG 3141423 - 3142652 + | putative transport protein TERM 4079 3142687 - 3142660 - T 90 -9.9 -4.54727 | opp_overlap 3142662, overlap 3142662 TCGGCTAAAGTAAAA GATAGCCGGGA TATAAC TCCCGGCTATT TTATATAAGAATCCA TERM 4080 3142662 - 3142685 + T 100 -12.5 -4.53303 | opp_overlap 3142660 3142662 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC TERM 4081 3142685 - 3142662 - T 95 -12.5 -3.88396 | opp_overlap 3142662, overlap 3142660 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC yohL 3142955 - 3142683 - | hypothetical protein SC2963 3144912 - 3144154 - | hypothetical protein TERM 4082 3144507 - 3144493 - G 85 -4.2 -5.24796 | opp_overlap 3144493 CGGAGATAACAAAAA GGCG TCCAGCT CGCC TGTCCTGCGCAGGCG SC2964 3145405 - 3144899 - | hypothetical protein SC2965 3145694 - 3145512 - | putative outer membrane protein SC2966 3146581 - 3145796 - | hypothetical protein TERM 4083 3145925 - 3145905 - G 72 -2.6 -4.83615 | gap 1 TATTCCGTATAAAAA TGCC-CCAT TTTG ATGGTAGCA GAAGGAGAAATAATA stdC 3147321 - 3146578 - | putative fimbrial chaparone protein stdB 3149851 - 3147362 - | putative outer membrane usher protein TERM 4084 3149941 - 3149916 - R 72 -4.7 -4.61868 | opp_overlap 3149916 CAGTCAGATATAAAA GCCGTCC GATCCCCTCCGT GGACGGC TTCTCCCTGTCGTTA stdA 3150681 - 3149971 - | putative fimbrial-like protein TERM 4085 3150783 - 3150767 - R 86 -5.1 -5.4593 | opp_overlap 3150771 3150775 3150781, overlap 3150769 3150771 TTAAAACAATAAAAA TAGATCG ATA CGATCGA TGATTATGATCGTAA TERM 4086 3150781 - 3150769 - R 76 -7.7 -4.32946 | opp_overlap 3150771 3150775, overlap 3150767 3150771 AAAACAATAAAAATA GATCG ATA CGATC GATGATTATGATCGT yfdX 3151906 - 3151274 - | hypothetical protein TERM 4087 3151489 - 3151504 + g 90 -4.6 -5.42131 | CGCCTGCTAGTTTCA GGGCCT CTAT AGTCCC TTTTTTATCTCCTTC pagC 3152489 - 3151953 - | outer membrane protein (associated with virulence) SC2972 3152762 - 3152535 - | hypothetical protein TERM 4088 3153085 - 3153065 - R 100 -11.9 -5.99154 | opp_overlap 3153068 CAGGAAACAAAAAAA GAAGGGAGC GGT ACTCCCTTC GTAAACATGTCAGAA pilT 3153693 - 3153295 - | plasmid maintenance protein TERM 4089 3153590 - 3153564 - G 83 -12.4 -3.62096 | TTTCAGCACCGTAAA TCAGCTCCATTA AGG TGATGGAGCTGA TACACATTCGGGATG yge 3154058 - 3153693 - | putative cytoplasmic protein SC2975 3154129 - 3154380 + | putative periplasmic protein TERM 4090 3154397 - 3154377 - f 86 -11.9 -3.60098 | ATTCTCCATGTCAAA GTGATCGTC AGC GACGACCAC CACACCGAGGTGGAC TERM 4091 3155297 - 3155270 - g 77 -4.1 -5.12617 | GAACCACCTAAAAAA CGGGGATTATA TCGGTG TCTACTCCCCG CTTGACGGGCTGGAC SC2976 3154821 - 3155462 + | hypothetical protein ygeR 3156505 - 3155747 - | putative metalloendopeptidase TERM 4092 3156187 - 3156204 + g 72 -4.1 -4.76123 | opp_overlap 3156173, overlap 3156171 3156186 ATGACGGTCTGACCG CAGCAGT TTTT GTTGCTG TTTTATTGCTGGTTT TERM 4093 3156725 - 3156748 + H 84 -8.1 -4.67038 | opp_overlap 3156725 GATCGTCTGAGTATA TGGCCTGGC CATGCT GCCGGGTCA TTTTAATTTTCAGGA TERM 4094 3156949 - 3156938 - g 71 -5.8 -4.24342 | TCGCTGAGCAAGAAA GCCT GGCC AGGC GTGTGGACGAATTCG idi 3156770 - 3157315 + | isopentenyl-diphosphate delta-isomerase TERM 4095 3157344 - 3157390 + T 74 -8.2 -3.90744 | gap 3, opp_overlap 3157347 3157349 3157351, overlap 3157350 3157351 GCGCTACGTCTGAAC GAAG-AGA-TGCCGGATGGCGGC TAAT GCC-CCATCCGGCAATTTACATC TTATTTCACCGGACG TERM 4096 3157383 - 3157349 - T 74 -10.7 -3.24032 | gap 1, opp_overlap 3157344 3157350 3157351, overlap 3157347 3157351 ACGTCTGAACGAAGA GATGCCGGATGGCGGC TAAT GCC-CCATCCGGCAAT TTACATCTTATTTCA TERM 4097 3157350 - 3157382 + T 100 -14.2 -3.82865 | gap 1, opp_overlap 3157349 3157347 3157351, overlap 3157344 3157351 CGTCTGAACGAAGAG ATGCCGGATGGCGGC TAAT GCC-CCATCCGGCAA TTTACATCTTATTTC TERM 4098 3157351 - 3157381 + T 100 -17.7 -2.88634 | gap 1, opp_overlap 3157349 3157347 3157351, overlap 3157350 3157344 GTCTGAACGAAGAGA TGCCGGATGGCGGC TAAT GCC-CCATCCGGCA ATTTACATCTTATTT TERM 4099 3157381 - 3157351 - T 100 -17.7 -3.18366 | gap 1, opp_overlap 3157351 3157350 3157344, overlap 3157349 3157347 GTCTGAACGAAGAGA TGCCGGATGGCGGC TAAT GCC-CCATCCGGCA ATTTACATCTTATTT lysS 3158908 - 3157391 - | lysyl-tRNA synthetase prfB 3159799 - 3158918 - | peptide chain release factor RF-2 TERM 4100 3158977 - 3159011 + g 80 -12.3 -3.44848 | gap 1, overlap 3158974 3158976 TACCGTCCAGTACCG CCTGTGTATTGCGGGT TTCC ACCC-CAGTACGCAGG TCTTTAATGCGGGAA TERM 4101 3159827 - 3159841 + r 71 -7.1 -4.07885 | overlap 3159808 ATCGACGATCGCTTC GAGCG ATGAA CGCTC TTTTCCCAGCGCCTG TERM 4102 3160009 - 3160023 + r 72 -2.8 -4.96996 | TTCACCGGGTTAATT TCAAAC ATG GTCTGA TTTCTTTTATTTGAC TERM 4103 3160084 - 3160059 - R 70 -9.1 -3.30903 | opp_overlap 3160058 3160059 AAAATGCGGTTATAA GGGCGAAAT ATTAGCGG ATTTCGCCC CTTAATTACAGCGAA recJ 3161854 - 3160121 - | ssDNA exonuclease RecJ dsbC 3162573 - 3161860 - | thiol:disulfide interchange protein DsbC TERM 4104 3162056 - 3162069 + g 77 -3.8 -5.0707 | overlap 3162063 CCCTTACCTGCCATG GCGT CATCAA ACGC TTTGTTTTTGTCTTT TERM 4105 3162063 - 3162073 + g 81 -4 -5.19879 | overlap 3162056 CTGCCATGGCGTCAT CAAA CGC TTTG TTTTTGTCTTTGGCG xerD 3163493 - 3162597 - | site-specific tyrosine recombinase XerD fldB 3163606 - 3164127 + | flavodoxin FldB TERM 4106 3164151 - 3164183 + T 80 -12.8 -3.0752 | gap 1, opp_overlap 3164161, overlap 3164161 TCGCTGTATTTCCCT CTCGACGGAACCGCG TTTA CGCCGTTCCGTC-AG TGTTGGCCTGATATC ygfX 3164593 - 3164180 - | hypothetical protein ygfY 3164840 - 3164574 - | hypothetical protein SC2988 3164839 - 3165075 + | hypothetical protein TERM 4107 3165659 - 3165644 - g 70 -9 -3.73336 | opp_overlap 3165641, overlap 3165646 AGCCGAACTGAATAA CAGCCA ACAG TGGCTG GCATTGGATATTGAA ygfZ 3165090 - 3166070 + | putative global regulator TERM 4108 3166126 - 3166084 - T 83 -9.9 -4.16279 | gap 2, opp_overlap 3166082 3166084 3166086 GATATCACGTTAAAA GC-CG-GATAGCCTGATAGCG CAA CGCCATCAGGCTCGCACGTGC TGTTCTCGTAGGCCG yqfA 3166845 - 3166186 - | hypothetical protein TERM 4109 3166673 - 3166656 - G 80 -4.8 -5.10461 | TTGAGGCAAGAAAAA GCAGGA TCATGC TCCCGC CATATAAACTGTAGC TERM 4110 3166940 - 3166954 + r 72 -5.8 -4.46854 | GCTAAAATAAATTCG CAAAAT TAA ATTTTG TTTATTATTCAATAA yqfB 3167320 - 3167009 - | hypothetical protein bglA 3167478 - 3168911 + | 6-phospho-beta-glucosidase A TERM 4111 3168919 - 3168946 + T 75 -9.8 -3.55548 | overlap 3168920 3168939 AGCTTTAACTCCTGC ACGTTACCCGCC AGTC GGCGGGTAACAC TTTGAACGAGTCTTA TERM 4112 3168920 - 3168945 + T 81 -13.3 -2.73007 | overlap 3168919 3168939 GCTTTAACTCCTGCA CGTTACCCGCC AGTC GGCGGGTAACA CTTTGAACGAGTCTT SC2993 3169852 - 3168959 - | putative outer membrane protein TERM 4113 3169140 - 3169153 + g 78 -2.3 -5.26875 | TGGTTATTAATTACG CTGCC ATTA GACAG TTTTTTCGTTCCAGA TERM 4114 3169530 - 3169546 + g 70 -5.1 -4.5032 | overlap 3169531 CCCTCTATGTGCTCA GGAGACA GAT TGTCTCG TTTGTTATTGATATA TERM 4115 3170089 - 3170073 - R 71 -3.7 -4.76892 | ACAGCAAGGTAAAAA TGATGCA CAA TGAATCA TTAAACTCTAAAAAG TERM 4116 3170282 - 3170269 - R 87 -9.5 -4.24123 | opp_overlap 3170269 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAAACAGTCG TERM 4117 3170269 - 3170282 + r 75 -9.5 -3.53444 | opp_overlap 3170269 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAAACAGTCG gcvP 3173181 - 3170308 - | glycine dehydrogenase gcvH 3173733 - 3173344 - | glycine cleavage system protein H gcvT 3174853 - 3173759 - | glycine cleavage system aminomethyltransferase T TERM 4118 3174820 - 3174795 - G 71 -6.1 -4.28548 | gap 1, opp_overlap 3174796 3174808, overlap 3174796 3174799 ATCCAGCCATGAAAA TCGACCATGCGG GCG CCGCATAG-CGT GTGTTGTTCGTACAA SC2997 3176510 - 3175308 - | hypothetical protein TERM 4119 3176036 - 3176060 + g 77 -8.6 -4.13767 | gap 1, opp_overlap 3176038, overlap 3176054 CCGCGGCAATCACCA GAC-GCGCGGT TAAC ATCGCGCCGTC TTTTAAAGTCAGGAA TERM 4120 3176546 - 3176575 + r 72 -5 -4.72272 | gap 2, opp_overlap 3176556, overlap 3176547 3176556 AACAATCAAACCGTA GGCCGGATAAGGCG AAGC CGCC--ATCCGGCA TTTTTACTGAACACG TERM 4121 3176556 - 3176611 + r 100 -30 -3.30124 | opp_overlap 3176556 3176592, overlap 3176547 3176546 CCGTAGGCCGGATAA GGCGAAGCCGCCATCCGGCATTTT TACTGAAC ACGATGCCGGATGGCGGCTTCGCC TTATCCGGCCTACAG TERM 4122 3176611 - 3176556 - R 100 -27.8 -3.30124 | opp_overlap 3176547 3176546 3176556, overlap 3176592 CCGTAGGCCGGATAA GGCGAAGCCGCCATCCGGCATTTT TACTGAAC ACGATGCCGGATGGCGGCTTCGCC TTATCCGGCCTACAG ubiH 3177811 - 3176633 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 3179124 - 3177808 - | proline aminopeptidase P II TERM 4123 3179073 - 3179053 - G 75 -12.5 -2.60496 | opp_overlap 3179052 3179052 3179055, overlap 3179052 3179050 3179055 CGGCGCGGCAAAGAT CAGCGCGGC GCT GCCGGGCTG CATTTGCGCCAGTAA TERM 4124 3179124 - 3179142 + r 85 -3.8 -5.5353 | overlap 3179125 ATTCCTGCTGAGTCA TGACATGG CCT CCATTTCG TTTTTTCTTAGTGTA ygfB 3179728 - 3179150 - | hypothetical protein TERM 4125 3179408 - 3179396 - G 77 -4.8 -4.87291 | GAGGCCAAGCAAAAA GTGG TTAAC CCAC CCGGCTAAGGCATCT TERM 4126 3179492 - 3179476 - G 70 -2.9 -4.72486 | opp_overlap 3179480, overlap 3179480 3179482 GATAAAGCTGAAAAA GAAAGCC GTC GTCTTCC AGCGCGTCGCTGGTC TERM 4127 3179516 - 3179480 - G 80 -5 -4.88293 | opp_overlap 3179480 3179495, overlap 3179476 3179482 AAGCTGAAAAAGAAA GC-CGTCGTCTTCCAGCG CGT CGCTGGTCGCCG-CGTGC ATTTTGCGCAGCGCC TERM 4128 3180113 - 3180102 - g 72 -3.6 -4.77157 | overlap 3180109 3180110 TTAACTCAGGAAAAA GCGA AGAC CCGC GATTACGCGGCGAGC ygfE 3179895 - 3180224 + | Z-ring-associated protein TERM 4129 3181038 - 3181094 + G 74 -2.1 -5.05782 | overlap 3181083 CCGCTGCCTGCGGTG GTGACGCCGTCAAAAGTTTGGGAATGG TAG CCATGTTTTACCGATTGACAGCGTCGC TTTTTTGACCTAAAT ygfA 3180471 - 3181067 + | putative ligase TERM 4130 3181238 - 3181257 + T 86 -11.4 -3.71649 | overlap 3181253 CCTTTCCTTTTTAGA GCCCCTGC TTCG GTAGGGGC TTTCCCGTTTCAGCG TERM 4131 3181440 - 3181413 - T 72 -5.5 -4.4281 | opp_overlap 3181416, overlap 3181414 3181416 GGAAACCAGAAGAAA GGATGGGCAGG TCATCT CCTGCCCATTT AGAGGAAATTAGTAC TERM 4132 3181437 - 3181416 - T 79 -11.6 -3.16682 | opp_overlap 3181416, overlap 3181414 3181413 AACCAGAAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGAGGAAATTAG TERM 4133 3181416 - 3181437 + T 86 -11.6 -3.54459 | opp_overlap 3181416 3181414 3181413 AACCAGAAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGAGGAAATTAG serA 3182681 - 3181449 - | D-3-phosphoglycerate dehydrogenase rpiA 3183607 - 3182948 - | ribose-5-phosphate isomerase A TERM 4134 3184172 - 3184146 - g 74 -8.1 -3.92592 | gap 2 AGGTGGAAGATGAAA CGCGCACGCAAGA ACG TCT-GCGT-CGCG GCGAGGTGGTGGGCG iciA 3183761 - 3184654 + | chromosome replication initiation inhibitor protein TERM 4135 3184914 - 3184889 - g 100 -12.5 -4.39828 | opp_overlap 3184885, overlap 3184891 AACACCGGGAGAAAA CGCGGCCTGGA AGCG CCCAGGCCGGG TGAGATTACTGCGTG TERM 4136 3184912 - 3184891 - g 78 -13.7 -2.53422 | opp_overlap 3184885, overlap 3184889 CACCGGGAGAAAACG CGGCCTGGA AGCG CCCAGGCCG GGTGAGATTACTGCG SC3006 3184666 - 3184917 + | hypothetical protein yggE 3185666 - 3184920 - | hypothetical protein yggA 3186395 - 3185760 - | arginine exporter protein yggB 3187456 - 3186596 - | mechanosensitive channel MscS TERM 4137 3186718 - 3186729 + g 71 -5.8 -4.25104 | CCCAGTAGACATTTT GCAG GTCG CTGC TTTTACTCCAGACAC TERM 4138 3187669 - 3187650 - R 100 -12.2 -5.73339 | opp_overlap 3187650 ATAACGATAAAAAAA TGGCTTCC CGAG GGAAGCCA TTTCAATCAGCAGAC TERM 4139 3187650 - 3187669 + r 88 -12.2 -3.64703 | opp_overlap 3187650 ATAACGATAAAAAAA TGGCTTCC CGAG GGAAGCCA TTTCAATCAGCAGAC fba 3188768 - 3187689 - | fructose-bisphosphate aldolase TERM 4140 3188819 - 3188806 - R 72 -3.1 -5.00616 | gap 1, overlap 3188809 GGCTTTGGGAAAAAA CACGGG CCG CCC-TG AATGTCAGATCGGCG TERM 4141 3188866 - 3188840 - R 80 -9.5 -3.87373 | gap 1, opp_overlap 3188840 3188863, overlap 3188844 CAGATCGGCGATAAA TCAACGGGCAGG AATC CCTGCCCGT-AA CGATTACTTCTTAGC TERM 4142 3188863 - 3188844 - R 100 -15 -3.6053 | opp_overlap 3188840, overlap 3188840 TCGGCGATAAATCAA CGGGCAGG AATC CCTGCCCG TAACGATTACTTCTT pgk 3190033 - 3188870 - | phosphoglycerate kinase TERM 4143 3189629 - 3189649 + g 76 -3.2 -5.00616 | opp_overlap 3189629 GGCGTCCATCACGAA TACGTCAC ACAGG GCGGCGTA TTTTTTAGACAGCGC TERM 4144 3189657 - 3189673 + g 74 -4.3 -4.69559 | GCGGCGTATTTTTTA GACAGCG CTT CGTCGTC TTTCTTTTCGCCTTT TERM 4145 3189998 - 3189988 - G 72 -2.4 -4.87665 | opp_overlap 3189996 CCGCACGGATAAAAA CGCG TTT CCCG GCCAGATCCAGATCG epd 3191101 - 3190055 - | erythrose 4-phosphate dehydrogenase TERM 4146 3190712 - 3190699 - G 71 -4.5 -4.62069 | overlap 3190700 GGTTCACGCCAAAAA CGACG GTGG CGTCA AGATCGTTGCTGCCC SC3013 3191475 - 3191900 + | hypothetical protein TERM 4147 3192137 - 3192169 + G 83 -12 -3.65656 | GGCTGCTTACCGATC CTATCGCTGCCGCG TTTGC CCCGGTAGCGATGG TTATCTGTCTGGTCG SC3014 3191926 - 3192504 + | hypothetical protein SC3015 3192505 - 3193212 + | hypothetical protein TERM 4148 3193243 - 3193258 + GF 71 -4.6 -4.55798 | TTCCGTCCGATGCGA CACGCC CGCC GGCATG TTTTGATTTCCACTA cbiO 3193200 - 3193877 + | putative ABC-type cobalt transport system, ATPase component TERM 4149 3194420 - 3194471 + GT 90 -15.4 -2.53903 | gap 3, opp_overlap 3194433, overlap 3194430 3194430 3194433 3194452 CTGGCGACATGCCGG GCACGGG-GAAC-CAGCGTCGTGGC GATTA GCCATGACGCTGCGTTTACCCG-GC GTCATTTTTCACGGG TERM 4150 3194430 - 3194461 + GT 90 -13.1 -3.5393 | gap 1, opp_overlap 3194433, overlap 3194420 3194430 3194433 3194452 GCCGGGCACGGGGAA C-CAGCGTCGTGGC GATTA GCCATGACGCTGCG TTTACCCGGCGTCAT TERM 4151 3194430 - 3194460 + GT 81 -13.3 -2.72144 | opp_overlap 3194433, overlap 3194430 3194420 3194433 3194452 GCCGGGCACGGGGAA CCAGCGTCGTGGC GATTA GCCATGACGCTGC GTTTACCCGGCGTCA TERM 4152 3194457 - 3194433 - gT 73 -11.4 -2.72344 | opp_overlap 3194430 3194430 3194420 3194433 3194452 GGGCACGGGGAACCA GCGTCGTGGC GATTA GCCATGACGC TGCGTTTACCCGGCG TERM 4153 3194433 - 3194457 + GT 83 -13.6 -2.64155 | opp_overlap 3194433, overlap 3194430 3194430 3194420 3194452 GGGCACGGGGAACCA GCGTCGTGGC GATTA GCCATGACGC TGCGTTTACCCGGCG TERM 4154 3194452 - 3194475 + GT 89 -8.8 -4.58663 | opp_overlap 3194433, overlap 3194433 3194430 3194430 3194420 CGTGGCGATTAGCCA TGACGCTGCG TTTA CCCGGCGTCA TTTTTCACGGGTGGT cysA 3193826 - 3194527 + | putative ABC-type cobalt transport system, ATPase component TERM 4155 3194532 - 3194551 + T 100 -15 -4.42619 | opp_overlap 3194532 AGGGAGAATAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCATATTA TERM 4156 3194551 - 3194532 - T 100 -15 -5.56673 | opp_overlap 3194532 AGGGAGAATAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCATATTA tktA 3196562 - 3194571 - | transketolase TERM 4157 3195598 - 3195614 + g 76 -8.7 -3.96148 | opp_overlap 3195595 3195591 CGAGTGAATTCAGCA GCCTTCT GCG GGAAGGC TTTCTCATAAGCCGC TERM 4158 3195742 - 3195800 + g 83 -9.5 -4.15044 | gap 2, overlap 3195739 3195743 CAGCCCAACTGTTCG C-GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCCTG TTTGTTCGGCGAACC TERM 4159 3195743 - 3195798 + g 89 -13.2 -3.6761 | gap 1, overlap 3195739 3195742 AGCCCAACTGTTCGC GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCC TGTTTGTTCGGCGAA TERM 4160 3196257 - 3196273 + g 86 -7.9 -4.71061 | overlap 3196258 3196259 AGCGGTGTAGCTCAC TTCCGGG TGA CCCGGGG TTTTTGAATGTAGCT TERM 4161 3197033 - 3197022 - g 73 -5.8 -4.38313 | overlap 3197015 3197023 ACAGCAAAGCGAAAA TCGC GCCG GCGA GCAGCGAATACACTA TERM 4162 3197395 - 3197372 - g 71 -4.6 -4.57073 | gap 1, overlap 3197374 GATCTTGGCGAAAAA CT-GGTGAACT CGC AGTTCTCCCAG CGTCAGGAGTCCGAA yggG 3196838 - 3197596 + | putative Zn-dependent protease with chaperone function speB 3198617 - 3197697 - | agmatinase TERM 4163 3198272 - 3198284 + g 71 -4.8 -4.59773 | AGAGCATACGCTTGC CTGC AGACA GCAG TTTTTCAGCGTGCGC TERM 4164 3198683 - 3198651 - R 100 -12.7 -5.80817 | opp_overlap 3198645 3198651 GTCAATATAAAAAAA CCCTCCCGCGTCG TTAGGCC CGACGAGGAAGGG TTTGAATTTGTTTAC TERM 4165 3198651 - 3198683 + r 84 -10.5 -3.96542 | opp_overlap 3198651, overlap 3198645 GTCAATATAAAAAAA CCCTCCCGCGTCG TTAGGCC CGACGAGGAAGGG TTTGAATTTGTTTAC TERM 4166 3201035 - 3201022 - R 73 -2.5 -5.20333 | TATTGATAATAAAAA TAAAT GCTA ATTTA AAAATATGATTCATA TERM 4167 3201050 - 3201040 - R 73 -4 -4.74504 | ATGCTAATTTAAAAA TATG ATT CATA ACACCTCGCCAATCA TERM 4168 3201217 - 3201185 - R 100 -11.3 -4.79756 | opp_overlap 3201164 TACAGAACGTAAAAA GCCTTTCCGCGATTA GCC TCAACGCGAAAAGGC TCTGAAGTCAGAAAA yhcH 3201802 - 3201329 - | putative mannitol dehydrogenase yjmC 3202848 - 3201841 - | putative malate/L-lactate dehydrogenase TERM 4169 3202394 - 3202384 - G 71 -8.2 -3.86897 | overlap 3202385 GTTAGTCCCCAGAAA GCGC TCC GCGC CGCCATACGGCGCAA TERM 4170 3202680 - 3202659 - G 72 -11.5 -3.14132 | opp_overlap 3202652 TTGCTTTTGGATTAA GCCCGCCTG CGTT CAGGCGGGT ACAATAGTGCTCTAC yjjN 3203878 - 3202862 - | putative zinc-binding dehydrogenase TERM 4171 3204741 - 3204761 + r 72 -6.7 -4.26903 | opp_overlap 3204740 GCGGATCGAGATTAT CGGCAAACG TAA CGATCGCCG TTTTGGTCAAATGAC TERM 4172 3205636 - 3205624 - R 76 -4.9 -4.81734 | AAACACCATGAAAAA CAATA TTT TATTG AATAACGCGCCCGCT TERM 4173 3205927 - 3205917 - R 72 -5.4 -4.42806 | GTACGTTGAAACAAA GCTT TCA AAGC CCCTCTGGCCGAGGT uxuR 3207386 - 3206586 - | GntR family transcriptional regulator TERM 4174 3206614 - 3206641 + g 71 -4.2 -4.58663 | gap 1, opp_overlap 3206614 3206608 AAAAAATCATCAAAA TCTTCCAGC-GAA TCA TCCTGTTGGAAGA TTTTTACCAGCTCAT SC3025 3208271 - 3207540 - | putative outer membrane lipoprotein TERM 4175 3208396 - 3208369 - R 100 -15.8 -4.94487 | TTATAAAATATAAAA GGGTCGATTTAA ATAA TTAAATCGACCC ACAAGCGGAATACTC speA 3210314 - 3208416 - | arginine decarboxylase TERM 4176 3208722 - 3208710 - G 80 -9.1 -4.11183 | opp_overlap 3208708, overlap 3208707 GCCGACCATAAAGAA GCCGA GCA TCGGC GGATTCTCTGGATCA TERM 4177 3209533 - 3209518 - G 77 -8.2 -4.21142 | overlap 3209519 AGCTCAACATAGAAA CGCGCG GACT CGCGCA CGCCGGTCGCGATAT yqgB 3210532 - 3210401 - | hypothetical protein TERM 4178 3210608 - 3210591 - H 75 -6.3 -4.52703 | opp_overlap 3210603, overlap 3210581 GAAACCACGAGAAAA CTCTTGC GTTA ACAAGAG CGCCCTTGTTCAGTC yqgC 3210666 - 3210830 + | putative cytoplasmic protein TERM 4179 3210845 - 3210869 + T 70 -5 -4.52589 | gap 1, overlap 3210849 ACCCGGCTGGAAGTG GCGACACGAAG AAAA CGTCGTGT-GC TTTTGTATGAGCCGC yqgD 3211126 - 3210827 - | putative inner membrane protein TERM 4180 3210882 - 3210892 + g 81 -8.2 -4.36914 | TGCTTTTGTATGAGC CGCG CGT CGCG TTTTATACCCAGAAC TERM 4181 3211658 - 3211646 - g 83 -7.7 -4.59853 | opp_overlap 3211646, overlap 3211648 TGAAGTGCGTAAAAA TGGCA CCC TGCCA TGGTTGCGTCCGGAT TERM 4182 3212315 - 3212301 - g 74 -7.8 -4.11869 | GAAAAAACCGACAAA GCGCAA CTG CTGCGC GATGCTGCCGGTCTG metK 3211182 - 3212336 + | S-adenosylmethionine synthetase TERM 4183 3212409 - 3212391 - f 79 -11.7 -3.18582 | opp_overlap 3212391 TACCGTACTTATCAA GGCCAGC GCTCT GCTGGCC TTTATCATTGCTGAT TERM 4184 3212391 - 3212409 + F 95 -12.4 -4.08546 | opp_overlap 3212391 TACCGTACTTATCAA GGCCAGCG CTC TGCTGGCC TTTATCATTGCTGAT TERM 4185 3213092 - 3213079 - g 84 -3.1 -5.40072 | gap 1 TGGGTCGTAAAAAAA GCCTGA TGA TC-GGC GCTATCCTGTTCGTC TERM 4186 3213424 - 3213436 + G 76 -10.5 -3.69323 | GCCCGCGCTGGTTTG CGGCG AAA CGCCG TTTCCATGATGCTGA galP 3212829 - 3214223 + | major facilitator superfamily galactose:proton symporter TERM 4187 3214232 - 3214258 + F 100 -21 -5.08601 | CGACTAATCCCTCCA CGCTTCCTCCTG CCA CAGGAGGAAGCG TTTTTCTTGCAGTCC TERM 4188 3214747 - 3214733 - g 74 -11.4 -3.28712 | opp_overlap 3214724 3214741 3214743 3214743 CGTCCGCCGTCATAA CCGCGT AGT ACGCGG CGAAGCGGTTTATCG sprT 3214302 - 3214799 + | hypothetical protein endA 3214895 - 3215602 + | DNA-specific endonuclease I TERM 4189 3216095 - 3216059 - g 77 -3.6 -5.06816 | gap 1, overlap 3216060 3216061 ACGTCTGAACAAAAA GC-GCCAGCAGTGGCAA AAGA TCGCCATCGCCGCCTGC GAACAATGCGGGCGT yggJ 3215679 - 3216410 + | hypothetical protein TERM 4190 3216923 - 3216937 + G 74 -7.8 -4.14392 | AACCGCTGGACGGTA TGGGCG GCG CGTCCA TTTTCCGCGTTAAGG gshB 3216430 - 3217377 + | glutathione synthetase TERM 4191 3217490 - 3217512 + F 79 -10.6 -3.51924 | opp_overlap 3217490 3217486 TTGCCCGATAAGGCA GCCGTCCTTT GGC AAAAGACGGC TTATATGAGTGACAA TERM 4192 3217512 - 3217490 - f 78 -12.8 -2.59431 | opp_overlap 3217490, overlap 3217486 TTGCCCGATAAGGCA GCCGTCCTTT GGC AAAAGACGGC TTATATGAGTGACAA yqgE 3217593 - 3218156 + | hypothetical protein TERM 4193 3218208 - 3218196 - g 70 -3.3 -4.83169 | ACTTCGGCACAAAAA GCATC GGC GTTGC AATAGGACAACGCAT TERM 4194 3218344 - 3218306 - g 71 -9.5 -3.53761 | GAACGTTTGCTGAAA GAGTGGCAGCCGGACGA AATTA TTGTCGGGCTACCGCTC AATATGGATGGCACT yqgF 3218156 - 3218572 + | Holliday junction resolvase-like protein SC3038 3219335 - 3218619 - | putative transcriptional regulator yggR 3220417 - 3219437 - | putative protein transport TERM 4195 3220200 - 3220176 - G 78 -13.5 -2.52896 | overlap 3220135 TGATGTGTGAACGCA CTGGCGCGCAG GCG CCGCGTGCCAG ACAGCGAGACGGCGA TERM 4196 3220492 - 3220478 - g 70 -5.6 -4.38154 | opp_overlap 3220480, overlap 3220480 ACATCCGGGACAAAA TCTCCG CCG CGGCGA CGCGTTGCGGCCGCT TERM 4197 3220568 - 3220549 - g 71 -5.7 -4.23781 | overlap 3220550 GTGAGTAAAACCAAA CCTGCGA GCGACA TCGCAGA AGCCATTGCCGCCGG TERM 4198 3220661 - 3220631 - g 74 -2.5 -5.00884 | opp_overlap 3220618, overlap 3220618 3220632 AGGGGGTGGAAAAAA TCCGCCACTTTCA GGAAG CGAAAGTGGAAGG CCTGCACTGGCACTT yggS 3220435 - 3221139 + | hypothetical protein yggT 3221158 - 3221724 + | hypothetical protein yggU 3221721 - 3222011 + | hypothetical protein TERM 4199 3222073 - 3222086 + GF 72 -6.7 -4.21098 | opp_overlap 3222058, overlap 3222058 GTGCGCGAGCTCGCG TCGCT GTTA AGCGA TTTTGGGCTTGATGT TERM 4200 3222579 - 3222551 - gf 91 -3.7 -5.4505 | opp_overlap 3222578, overlap 3222553 3222575 CCCGTGAAGAAAAAA GCGCGATTTCCCA CCG TGGACAAGCGCTC AAGCTGCTGCTGGAT yggV 3222019 - 3222612 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 4201 3222915 - 3222930 + GT 70 -10.4 -2.50443 | opp_overlap 3222907, overlap 3222914 AAGCGAACCCCGGCA CGGTCG AAGC CGACCG CTTCATCGACTATCA TERM 4202 3223679 - 3223702 + GT 73 -5.3 -4.6644 | opp_overlap 3223664 3223686 TGCGAGCAATACTGG CAGATTACC CGGCAC GGTAAACTG TTTTTAAACTATCTT yggW 3222566 - 3223741 + | coproporphyrinogen III oxidase yggM 3224840 - 3223833 - | putative periplasmic protein TERM 4203 3224291 - 3224302 + g 74 -4.4 -4.77165 | CGTCCGCTTCTTTTT TAGC TACC GCTA TTTTCTTATCCAGGG TERM 4204 3224706 - 3224741 + g 70 -7 -4.2142 | gap 1, opp_overlap 3224708 TAAGGTAATGGAATC CAGTTTAAGTATGCCGT GGT ACTGCTTAC-TAAACTG TTCTTTTAAGATGTT TERM 4205 3224966 - 3224942 - R 73 -10 -3.34715 | gap 1, opp_overlap 3224943 3224944, overlap 3224940 3224943 GAGGTCTTCCAAAGA TGGCCCCGGCC TTCC GACCGGGGC-A TTATCTTTAATACTG TERM 4206 3224966 - 3224943 - R 76 -11.6 -2.60615 | opp_overlap 3224943 3224944, overlap 3224942 3224940 AGGTCTTCCAAAGAT GGCCCCGGCC TTCC GACCGGGGCA TTATCTTTAATACTG TERM 4207 3224943 - 3224966 + r 77 -9.4 -3.87323 | opp_overlap 3224942 3224943 3224940, overlap 3224944 AGGTCTTCCAAAGAT GGCCCCGGCC TTCC GACCGGGGCA TTATCTTTAATACTG TERM 4208 3224944 - 3224965 + r 82 -12.9 -2.91671 | opp_overlap 3224942 3224943 3224940, overlap 3224943 GGTCTTCCAAAGATG GCCCCGGCC TTCC GACCGGGGC ATTATCTTTAATACT ansB 3226019 - 3224973 - | L-asparaginase II TERM 4209 3225325 - 3225305 - G 71 -7.5 -3.95073 | TCGCATAGTTATAAA CGATACCGA CTT TCGGCAACG CGGTCAGCTTCGACA SC3047 3226190 - 3226038 - | hypothetical protein TERM 4210 3226167 - 3226189 + g 86 -12 -3.90744 | opp_overlap 3226168, overlap 3226168 AAAAACAGAATAAAA AGGCGCAGAT ACG ATCTGCGCCA TTGTTTAAAAAGAAA TERM 4211 3226188 - 3226168 - G 100 -15.5 -5.35365 | opp_overlap 3226167 3226168 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTGCGCC ATTGTTTAAAAAGAA TERM 4212 3226168 - 3226188 + g 87 -15.5 -2.94232 | opp_overlap 3226168, overlap 3226167 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTGCGCC ATTGTTTAAAAAGAA yggN 3226927 - 3226208 - | hypothetical protein TERM 4213 3226949 - 3226968 + r 73 -10.6 -3.03203 | opp_overlap 3226948 3226947 CCCTCAAGACAAAGC GGGCCGGC ATTT GCCGACCC TGTACTTATTAGTCC yggL 3227303 - 3226977 - | hypothetical protein TERM 4214 3227125 - 3227141 + g 70 -6.5 -4.18488 | CAGGCCAGGTAGCCG CTGCCGT CAA ACGCCAG TTTATTAGGCTCAAT trmB 3228022 - 3227303 - | tRNA (guanine-N(7))-methyltransferase TERM 4215 3227653 - 3227681 + g 83 -9.5 -4.08394 | TTTTATGCAACACTT CTACCGCGTCATG GCA CATGACGCGCAGG TTTTCAACGCCCTCT TERM 4216 3228691 - 3228712 + G 74 -6.5 -4.25283 | gap 1, opp_overlap 3228691 TGAGCGAGCAAGTGA CGCCCGCACG CGG CGTG-GAGCG TTTTAATCAGGCGAT mutY 3228177 - 3229229 + | adenine DNA glycosylase TERM 4217 3229440 - 3229418 - g 77 -4.1 -4.99861 | GATTAACGAGAAAAA GCTCAACAT GATGA ACGCCGAGC ACCGTAAGCTGCTGG yggX 3229257 - 3229532 + | hypothetical protein TERM 4218 3230149 - 3230132 - g 80 -9.1 -4.08945 | overlap 3230133 3230144 ATTACTTGCTGAAAA CGCGGCT CAAA AGCCGCA GTAACGGCCTGAGTA mltC 3229645 - 3230730 + | murein transglycosylase C nupG 3230947 - 3232203 + | major facilitator superfamily nucleoside transporter TERM 4219 3232213 - 3232264 + T 100 -18.3 -3.51708 | gap 2, overlap 3232214 CATTAATTCTTGCCC TGTT-TC-GCAGGCCGGATAAGGCG TAAA TGCCTTATCCGGCCTGCAGGCAACG TTACTTTAAAACATA TERM 4220 3232214 - 3232263 + T 100 -19.6 -2.70704 | gap 2, overlap 3232213 ATTAATTCTTGCCCT GTT-TC-GCAGGCCGGATAAGGCG TAAA TGCCTTATCCGGCCTGCAGGCAAC GTTACTTTAAAACAT speC 3234400 - 3232265 - | ornithine decarboxylase TERM 4221 3233305 - 3233292 - G 73 -5.2 -4.56597 | TTGTGCGGGCAAAAA CGCG CCTGGC CGCG AATATGGTTATCTTT TERM 4222 3233994 - 3233981 - G 90 -5.3 -5.14563 | GTTTTCACCAAAAAA GTCAT AAAA ATGAC GGCCTGCGGGATGTT TERM 4223 3234507 - 3234537 + H 73 -9.9 -3.41602 | opp_overlap 3234506 3234509 3234516 CCGACCGCCAGACAT CAGTAAAAACAGA CTGTT TCTGATTTTACTG TTGTCCTGCAGTGAG TERM 4224 3234528 - 3234516 - H 71 -3.4 -4.79826 | opp_overlap 3234507, overlap 3234509 3234506 AGACATCAGTAAAAA CAGA CTGTT TCTG ATTTTACTGTTGTCC TERM 4225 3235017 - 3235032 + G 72 -2.4 -4.93877 | overlap 3235003 3235019 GGCGACGCTGGTCGG CGCGCT TATC GGCGAG TTTTGTTTGCTGGAA TERM 4226 3235283 - 3235297 + G 77 -11.4 -3.53563 | overlap 3235278 3235289 3235291 CCTGTTCGCTTGGCA TCGCCG TTT CGGCGA TTTGCGCGCCGATGT TERM 4227 3235500 - 3235515 + G 74 -2.4 -5.12617 | overlap 3235500 3235499 3235509 GGCGATGCCGATTTC CGCCGC ATGG GCGATG TTTTTTGCCTGATTC yqgA 3234820 - 3235527 + | hypothetical protein TERM 4228 3235675 - 3235659 - T 73 -10.9 -2.62616 | opp_overlap 3235658 3235657 3235654 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA agl 3236301 - 3235867 - | putative lactoylglutathione lyase ach 3237637 - 3236312 - | putative acetyl-CoA hydrolase maoC 3238189 - 3237662 - | putative monoamine oxidase TERM 4229 3238126 - 3238096 - G 78 -6.8 -4.60487 | overlap 3238098 GACGATGTTCAAAAA CATCACCGGGATGA AAA TCCTCCCAGTAAAG ACCCGAAATTTCTCG TERM 4230 3238124 - 3238098 - G 71 -8 -3.91506 | overlap 3238096 CGATGTTCAAAAACA TCACCGGGATGA AAA TCCTCCCAGTAA AGACCCGAAATTTCT cilB 3239055 - 3238213 - | LysR family transcriptional regulator TERM 4231 3239708 - 3239719 + G 100 -4.4 -5.94597 | ATTGCACTCTCGATT CTCA AAGA TGAG TTTTTTTTACTCTTC stmR 3239147 - 3240025 + | LysR family transcriptional regulator ars 3241812 - 3240073 - | putative arylsulfatase TERM 4232 3240268 - 3240293 + g 77 -11.3 -3.53811 | TATTTTCACTTTATC CGCATAATCTT CTGC GAGATTATGCG TTTCCAGGGGGTCAC TERM 4233 3240650 - 3240662 + g 70 -5.5 -4.46212 | overlap 3240651 GTATTAATTCCCCCC TGACC GCT GGTCG TTTTGTGATAGCGAC TERM 4234 3240789 - 3240779 - G 73 -5.4 -4.57341 | opp_overlap 3240779 AATTGCTTCCAAAAA TCTG GTT CAGA TTCATAGTGAAAGCC arsR 3243065 - 3241881 - | putative arylsulfatase regulator TERM 4235 3242818 - 3242807 - G 74 -7.2 -4.08216 | CGATTCCGGCTAAAA GCGG TTCA CCGC CTTGCCAGACAAAAT TERM 4236 3243158 - 3243182 + H 70 -5 -4.42386 | gap 1, opp_overlap 3243149 3243160, overlap 3243160 GCAGAATGCCGAGAG CAGGCTGTATC TATT GATAC-GCCGG TTTTCTGCATAGCGC TERM 4237 3243321 - 3243306 - H 76 -9 -3.68435 | overlap 3243304 CGTCTCAAAAGAATA TCGTCC TGAA GGACGA GAACTCACGGCATTT TERM 4238 3243377 - 3243389 + H 74 -3.5 -5.00616 | opp_overlap 3243377 AAAAAATTATATTAA TAATT TTA AATTA TTTTTTAGAACAACC TERM 4239 3243655 - 3243667 + G 84 -3.3 -5.36965 | GCGCAACTCATTCCT CTGTC GTC GGCGG TTTTTTATCGTGTTA moaR 3243577 - 3244260 + | response regulator SC3065 3244922 - 3244365 - | hypothetical protein SC3066 3246399 - 3244900 - | putative amino acid transporter TERM 4240 3245610 - 3245581 - G 70 -2.9 -4.7497 | gap 1, overlap 3245583 3245585 CGTATCCAGTAAAAA GATATGGTTTGCCG CAT CGACAA-CCACATT ATTTACTTGCCGGTT SC3067 3246982 - 3246608 - | hypothetical protein ordL 3248298 - 3246997 - | putative oxidoreductase TERM 4241 3248396 - 3248362 - H 70 -5.1 -4.386 | opp_overlap 3248362, overlap 3248380 TAACGTTTTACAAAA TATCGTCCGGAAGAA TGACG TTCTTTGGAACGATA TTCAGTTCCAGGCAA TERM 4242 3248471 - 3248494 + G 74 -2.4 -5.00616 | overlap 3248473 TCTGATGAGCGACGT GACATTACTT GCCG AAGTAACGAC TTTTTTACGCCAACG feaB 3248460 - 3249944 + | putative NAD-dependent aldehyde dehydrogenase yjiD 3250460 - 3250080 - | putative cytoplasmic protein SC3071 3250945 - 3250460 - | putative cytoplasmic protein SC3072 3251238 - 3251393 + | hypothetical protein TERM 4243 3251482 - 3251471 - T 79 -3 -5.27779 | GTGAACACTAAAAAA TGAT TTAA ATCA AAAAAAGCCATTCTC xcd 3252577 - 3251654 - | hypothetical protein yhcX 3253494 - 3252616 - | putative amidohydrolase TERM 4244 3253057 - 3253076 + g 73 -6.4 -4.43189 | opp_overlap 3253057 ACCCACCTTTGCAAA TGGCAGTT GAAA AACAGCCA TTTTATCGCCTTCCT TERM 4245 3253748 - 3253726 - R 74 -10.8 -3.27653 | overlap 3253724 ACCCTTACCACAATA TTATTTTCAG CAT CTGAAAATAA TCAGGCAAACTAAAT TERM 4246 3253767 - 3253793 + r 78 -6.5 -4.59773 | opp_overlap 3253769, overlap 3253769 GGCAAACTAAATGAT AACGCGCTGGT ATAAA ACCAACGCGTA TTTTTACCGATAAGG TERM 4247 3253769 - 3253791 + r 77 -9.1 -3.91506 | opp_overlap 3253769, overlap 3253767 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4248 3253791 - 3253769 - R 86 -11.3 -3.66643 | opp_overlap 3253767 3253769 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4249 3253840 - 3253817 - R 85 -12.4 -3.38326 | overlap 3253819 GATAAGGGTAATGAA GACGGCCACC CGAA GGTGGCCGTT AGAACCCGGTAGCGC TERM 4250 3253838 - 3253819 - R 100 -15 -3.25539 | overlap 3253817 TAAGGGTAATGAAGA CGGCCACC CGAA GGTGGCCG TTAGAACCCGGTAGC exuT 3255193 - 3253889 - | putative permease TERM 4251 3255276 - 3255265 - H 76 -4.4 -5.04325 | opp_overlap 3255269 CTGAAATCACAAAAA TTGG TTGA CCAA TCAATATTTTCTCAT uxuA 3255553 - 3256782 + | mannonate dehydratase TERM 4252 3256790 - 3256814 + F 100 -16.5 -3.62275 | GCAAATAACCTTCTT TCGCATGGCGC GAC GCGTCATGCGA TTTCCCCTACTCAAT uxuB 3256893 - 3258365 + | putative D-mannonate oxidoreductase TERM 4253 3259321 - 3259333 + G 76 -10.5 -3.68619 | GTTCCGCCTGCTGGG GCCGG ATA CCGGC TTTGACTCCATTGGC uxaC 3258377 - 3259789 + | glucuronate isomerase TERM 4254 3259919 - 3259907 - T 71 -3.4 -4.82901 | opp_overlap 3259907, overlap 3259914 GGCCGCCGATAAAAA GCAA AGAGG TTGC TGATTAATCCCGAAT TERM 4255 3259960 - 3259927 - T 100 -16.9 -3.14344 | opp_overlap 3259937, overlap 3259914 GAGGTTGCTGATTAA TCCCGAATCACTTAC TAAG GTAAGTGATTCGGGT AAACAAACACAGCCA mac 3261144 - 3260089 - | hypothetical protein TERM 4256 3261801 - 3261765 - R 100 -13.8 -3.82202 | gap 1, overlap 3261767 CACTGGTAAACACAA CAGGCGGGATATCGGCA CCCA CGCCGATATCCCGAC-G AGAATGACCCCGTTA TERM 4257 3261800 - 3261767 - R 100 -17.5 -3.49232 | overlap 3261765 CTGGTAAACACAACA GGCGGGATATCGGCA CCCA CGCCGATATCCCGAC GAGAATGACCCCGTT gsp 3263670 - 3261814 - | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase TERM 4258 3262955 - 3262968 + g 77 -4.5 -4.83615 | ATAACGTGTCCGTTC GCCTG TACA TAGGC TTTTTGTAACGGATC TERM 4259 3263347 - 3263322 - G 75 -12.5 -2.62184 | gap 1 CCTTTTGCCAGATGA GCAGCGCCCCGG CCT CCGGCGCGC-GC GGCGAACCGTTCGGG TERM 4260 3264226 - 3264239 + G 73 -5.2 -4.65895 | CGATAACTCACACAC CCCG CCGATT CGGG TTTTTGAGTCGGGCG yghU 3263897 - 3264763 + | putative glutathione S-transferase YghU mbp 3265484 - 3264831 - | hypothetical protein TERM 4261 3265386 - 3265336 - G 88 -11.2 -4.07568 | gap 3, overlap 3265321 CGGTTCGTCGTAAAA GGCGCGACCCGCA-GCGCCCGCCCG CTTT CCAGCA-GCGCCTGCGGAT-GCGCC AGGTTCGCCGAAGCA fbp 3266584 - 3265532 - | putative ferrichrome-binding periplasmic protein TERM 4262 3266258 - 3266278 + g 78 -6.7 -4.59773 | opp_overlap 3266255 3266257 CGTGACAAACACCAC CTGCGGGCG CAG CGCCACCAG TTTTTCAGGATCAAC TERM 4263 3266569 - 3266549 - G 80 -9.7 -3.96447 | CCAGCAAAAAAGCAA CGCCAGC AGAGAGA GCTGGCG CAAAAATTTATTCAT hybG 3266908 - 3266660 - | hydrogenase 2 accessory protein HypG hypA 3267277 - 3266936 - | hydrogenase nickel incorporation protein HybF hybE 3267758 - 3267270 - | hydrogenase 2-specific chaperone hybD 3268245 - 3267751 - | hydrogenase 2 maturation endopeptidase hybC 3269948 - 3268245 - | hydrogenase 2 large subunit TERM 4264 3268919 - 3268931 + g 74 -10.5 -3.50335 | TAGTGCCTTCCCACG GCGCC TGC GGCGC TTCATCTTTATACCA TERM 4265 3269474 - 3269490 + g 70 -9.5 -3.40382 | opp_overlap 3269477, overlap 3269477 ACTGACCGCTGGCGA CAAGATC CTT GATCTTG TTCTGAACTTTCGTG TERM 4266 3269967 - 3269978 + r 76 -4.4 -5.07652 | overlap 3269956 3269961 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3271123 - 3269945 - | putative hydrogenase 2 b cytochrome subunit TERM 4267 3270091 - 3270071 - G 74 -8.3 -3.95911 | AATAGAAATCAACAA TTCTTCCCA GGT TGGGAAGTA GTGGTAGCCGCCACC TERM 4268 3271095 - 3271105 + g 77 -8.2 -4.21462 | TTACTGATGATTTTT CCGC CCA GCGG TTTTGGATCATGACT hybA 3272099 - 3271113 - | hydrogenase 2 protein HybA TERM 4269 3271689 - 3271706 + g 76 -2.7 -5.00616 | gap 1, overlap 3271693 TTTGTCATAGTGGAC GATGCCGG TTT TCGG-ATC TTTTTTCAGCGCCGA TERM 4270 3271756 - 3271769 + g 74 -6.7 -4.29106 | CAGTTAGGATCGACG CAGTG CATA CACTG TTTCTTGATGTAGGC hypO 3273220 - 3272102 - | hydrogenase 2 small subunit SC3092 3273413 - 3273228 - | hypothetical protein yghW 3273697 - 3273410 - | hypothetical protein TERM 4271 3273707 - 3273740 + r 80 -12.7 -3.05384 | ATTCATCTGACCTCC TTAGCCACTATATAA TAAA TTATATAGCGGCTAA TTAAATGAAGGCCAG TERM 4272 3273755 - 3273767 + r 89 -6.2 -5.27477 | ATTAAATGAAGGCCA GCGC ATTAC GCGC TTTTTTGCTTCACAT mcp1 3275425 - 3273782 - | putative methyl-accepting chemotaxis protein TERM 4273 3273938 - 3273889 - G 76 -10.7 -3.62096 | gap 1, opp_overlap 3273868 GCTCACTAGCGGAAA GCCGGAACTGCTGTACGGAGCGTT GCA AATCCTCCGT-CTGCCGTTCCAGC GCCGCCGCCGCCGCG TERM 4274 3274098 - 3274075 - G 74 -11 -3.29144 | CGATCTGTTTCATAA TCGTCGTCAC TTCC GTGACGCCGA GCAGGATGGCGTCCA TERM 4275 3275495 - 3275519 + r 79 -2.1 -5.48303 | overlap 3275496 GTTATCGGCAAGGCG CGGAGAATATA TAA TGCATTCTCCA TTTTTTTACAGTTAT yqhA 3276226 - 3275732 - | hypothetical protein TERM 4276 3276107 - 3276094 - G 78 -6.7 -4.62069 | CCGCCAGGGCAAAAA CGTTC GGCA GAACG TGTAGAATTTCCTGG TERM 4277 3276156 - 3276128 - G 71 -4.6 -4.57341 | overlap 3276129 AATTTCCTGGAAAAA TTTTAGCGCTAA AGCGA TCAGCGCCAAAG AGAGGCCAAAATACA SC3096 3277020 - 3276505 - | putative ATP-dependent RNA helicase-like protein TERM 4278 3277203 - 3277189 - g 76 -2.8 -4.99972 | AGAAAACAGTAAAAA TTTGCC TAA GGGAAA GACAAAGCTCAGCGA SC3097 3277112 - 3277522 + | hypothetical protein SC3098 3277509 - 3277913 + | hypothetical protein TERM 4279 3278112 - 3278097 - g 85 -6.8 -4.87291 | gap 1, overlap 3278099 TATCCTAAGCAAAAA CAGCCGG CGC CCGGC-G TCCAGGCGAAAATGA TERM 4280 3278111 - 3278099 - g 83 -10.5 -4.05402 | overlap 3278097 TCCTAAGCAAAAACA GCCGG CGC CCGGC GTCCAGGCGAAAATG yghA 3278037 - 3278921 + | oxidoreductase TERM 4281 3279013 - 3278986 - T 100 -9.9 -5.4833 | gap 2 TTAGGCAATAAAAAA GCCGGGT--GGCG ACTT CGCCTTACCCGGC CTACAGCATCAGCAG exbD 3279459 - 3279034 - | biopolymer transport protein ExbD exbB 3280174 - 3279443 - | biopolymer transport protein ExbB SC3102 3280331 - 3280182 - | hypothetical protein SC3103 3280415 - 3280816 + | putative cytoplasmic protein TERM 4282 3281638 - 3281602 - gf 100 -16.1 -3.54741 | opp_overlap 3281609, overlap 3281604 3281609 CACCAGGCCCTGAAA TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA GACAAAAAACTGTCA TERM 4283 3281636 - 3281604 - gf 100 -16.5 -3.35046 | opp_overlap 3281609, overlap 3281602 3281609 CCAGGCCCTGAAATA CAAAACGCCCGATGA TGT TCATCAGGCGTTTTA CAGACAAAAAACTGT TERM 4284 3281631 - 3281609 - gf 100 -14.2 -4.78848 | opp_overlap 3281609, overlap 3281604 3281602 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA TERM 4285 3281609 - 3281631 + GF 95 -12 -4.07568 | opp_overlap 3281604 3281602 3281609 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA yis2 3280987 - 3281670 + | putative integrase protein TERM 4286 3282590 - 3282573 - gf 74 -7.7 -4.13304 | gap 1 AAAGCAGCCTCAAAA TCGCC-GC ATG GCTGGCGA ACCATCCTCAGGTCG metC 3281615 - 3282943 + | cystathionine beta-lyase yghB 3283083 - 3283742 + | DedA family, membrane protein yqhC 3284726 - 3283806 - | AraC/XylS family transcription factor yqhD 3284898 - 3286061 + | putative alcohol dehydrogenase dkgA 3286167 - 3286994 + | 2,5-diketo-D-gluconate reductase A TERM 4287 3287016 - 3287035 + F 100 -15 -5.72207 | TTTATCGCACGCCAT GCCCGACG ATGT CGTCGGGC TTTTTTTCATTTCGA TERM 4288 3287217 - 3287233 + G 74 -8.1 -4.06611 | AAAATCTCAGGGCGT TAAATGG CTC CCATTTA TTCTTATTCTGGTTA TERM 4289 3288439 - 3288451 + G 73 -10.5 -3.43288 | opp_overlap 3288433 CTGAATATACCGGCA GCGCC GAT GGCGC TTATGCTGGCGTTTA sot 3287191 - 3288645 + | putative cation transporter TERM 4290 3289129 - 3289110 - g 100 -11.4 -4.77036 | opp_overlap 3289108 GCTGATGATGAAAAA CTAGCCGC GCTG GCGGCCAG AATTCGTGAGGCATA hit 3288690 - 3289145 + | hypothetical protein ygiR 3291871 - 3289700 - | hypothetical protein TERM 4291 3292796 - 3292810 + G 78 -7 -4.57569 | overlap 3292798 CTTAACCTGGTACGA CGGCGG TGC CCGCAG TTTTTACGCCAGTAA TERM 4292 3292933 - 3292905 - g 71 -10.1 -3.57263 | overlap 3292879 ATCGCGATGGTGAAA GCGCTCGGCGGCG TGC CGACGCCGATGGC GCAAGGCGAACTCTA yiiZ 3292359 - 3293342 + | putative dicarboxylate-binding periplasmic protein TERM 4293 3293350 - 3293368 + F 88 -12.4 -3.56821 | opp_overlap 3293345 3293344, overlap 3293344 3293361 ATATGTAAATCTGCC GGGCAGGG TTC TCCTGCCC TTTACAGGATGTAAT yiaM 3293384 - 3293866 + | putative inner membrane protein TERM 4294 3294052 - 3294040 - g 76 -3.3 -5.02074 | opp_overlap 3294042 3294043, overlap 3294041 3294043 TTATTTCGCAAAAAA TGACC GTC GGTCT CGATGGCTTTACGCT TERM 4295 3294297 - 3294285 - g 70 -3.3 -4.82667 | CCATTACAGGAAAAA GAGGG CTA CTCTC CGGCGTTCTCTACGG TERM 4296 3294386 - 3294413 + G 71 -4.9 -4.57569 | overlap 3294386 3294387 TGTCTATTCGCTGGC TAGCGGCGGC-AC CTCT GTCGCCGCC-CTG TTTTTGGCGGGCTAC ygiK 3293877 - 3295184 + | putative integral membrane protein, transporter sufI 3296641 - 3295229 - | repressor protein for FtsI SC3117 3297452 - 3296715 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 4297 3297654 - 3297611 - R 90 -13.3 -3.61103 | opp_overlap 3297628 3297637, overlap 3297628 TAATCCGATCTGAAA CCGTAGGCCGGATAA-GACGC TACT GCGTCGTCATCCGGCA-ACGG CAGAGCGCCGGATGG TERM 4298 3297637 - 3297673 + r 75 -10.9 -3.10905 | opp_overlap 3297611 3297628, overlap 3297628 ATAAGACGCTACTGC GTCGTCATCCGGC AACGGCAGAGC GCCGGATGGCGGC TTAGATGCCTTGTCC parC 3299958 - 3297709 - | DNA topoisomerase IV subunit A TERM 4299 3300067 - 3300029 - R 77 -10.3 -3.31726 | overlap 3300027 3300030 TTGCCGCAGATAATA CCCTATCTCACGGTCTG AGTCA CAAACCGTGAGCCAGGT GACGAGGAAGTTAAC TERM 4300 3300066 - 3300030 - R 83 -13.8 -2.58822 | overlap 3300029 3300027 TGCCGCAGATAATAC CCTATCTCACGGTCTG AGTCA CAAACCGTGAGCCAGG TGACGAGGAAGTTAA ygiV 3300944 - 3300078 - | AraC family regulatory protein ygiW 3301408 - 3301016 - | putative outer membrane protein ygiX 3301407 - 3302219 + | DNA-binding transcriptional regulator QseB TERM 4301 3302241 - 3302261 + G 71 -6.1 -4.37527 | opp_overlap 3302231, overlap 3302244 CGCAACGTCTCAGCC TGCGCGTCA GGC TGACGCTTA TTTTCCTGATTCTGG TERM 4302 3302244 - 3302258 + G 86 -10 -4.29049 | opp_overlap 3302231, overlap 3302241 AACGTCTCAGCCTGC GCGTCA GGC TGACGC TTATTTTCCTGATTC TERM 4303 3302593 - 3302604 + G 81 -2.2 -5.37345 | gap 1, opp_overlap 3302593 TCTGAAGGATGACAA CGACC TCT GG-CG TTTTTTGTGGTTGAA ygiY 3302216 - 3303565 + | sensor protein QseC mdaB 3303672 - 3304253 + | NADPH specific quinone oxidoreductase (drug modulator) ygiN 3304285 - 3304599 + | hypothetical protein parE 3306616 - 3304724 - | DNA topoisomerase IV subunit B TERM 4304 3305439 - 3305461 + g 84 -3.3 -5.40072 | overlap 3305440 GGCAACGCCGGACCG CTGGTGAGC TTTTT GCGCACCAC TTTTTTTGCGGCGCG yqiA 3307225 - 3306644 - | esterase YqiA TERM 4305 3307108 - 3307079 - G 71 -10.8 -3.18239 | gap 1, opp_overlap 3307081 GAGAGACTCCAGCAA CT-CCGCCGCATC GGCAG GATACGGCGGTAG TTGAGGGACGATCAT icc 3308052 - 3307225 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase yqiB 3308499 - 3308077 - | hypothetical protein TERM 4306 3308166 - 3308176 + g 95 -5.4 -5.30616 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTTGGATAA nudF 3309128 - 3308496 - | ADP-ribose pyrophosphatase NudF TERM 4307 3308523 - 3308575 + g 74 -7.7 -4.20712 | opp_overlap 3308540, overlap 3308531 CTCGTTTTTTAACTC TTGATGATGCAACTGAAGCCATTGC AAA GCGATGACTGCGGCTGCGTTGTCGA TTTTCCCCTCTTCTA TERM 4308 3309062 - 3309049 - G 100 -3.7 -5.95166 | opp_overlap 3309050 3309055, overlap 3309050 TCCAATGAAAAAAAA CCGCG ATAG CGCGT TTCCCGTGCAATAAT TERM 4309 3309061 - 3309050 - G 74 -7.2 -4.15473 | opp_overlap 3309050 3309055, overlap 3309049 CCAATGAAAAAAAAC CGCG ATAG CGCG TTTCCCGTGCAATAA TERM 4310 3309257 - 3309281 + H 72 -5.7 -4.42235 | opp_overlap 3309241, overlap 3309259 GCCAACTTTTTGCAG TGGCGGATTCT GCT AGAATCAGCAA TTATTTTTACAAATT tolC 3309335 - 3310804 + | outer membrane channel protein TERM 4311 3310815 - 3310872 + F 100 -22.9 -2.78384 | overlap 3310814 ATTGATAAGTTATTC GCTGGCGCTGCGCTTATCAGACCTGTG CCCT TGTAGGTCTGGTAAGCGCGGCGCTACC TGTCATGAAGCCGCG TERM 4312 3311152 - 3311135 - g 76 -2.7 -5.00616 | opp_overlap 3311135, overlap 3311136 CTGGCTGTGAAAAAA GCGAT GAAACCGT ATCGC TGTATCAAAACGCTG TERM 4313 3311181 - 3311163 - g 71 -6 -4.25283 | ATCGCTGTATCAAAA CGCTGA TGACTGT TCAGCG GCGAATCCGGGCAAA TERM 4314 3311543 - 3311517 - g 71 -4.2 -4.65895 | overlap 3311518 3311520 TGCGGCAGGTAAAAA CTACGGCGCGGC GCA ACCGGGCCGGAC AATGACCGTACCGAA TERM 4315 3311540 - 3311520 - g 71 -10.3 -3.26405 | overlap 3311518 3311517 GGCAGGTAAAAACTA CGGCGCGGC GCA ACCGGGCCG GACAATGACCGTACC TERM 4316 3311663 - 3311636 - g 71 -10.6 -3.24232 | gap 1, opp_overlap 3311640, overlap 3311634 3311632 CCGTCGCCAAACAGA GCACCATGCAGCG TAG CGCTGC-CGGTAC TTCAACACGTTCGAT ygiB 3311017 - 3311688 + | hypothetical protein TERM 4317 3312061 - 3312077 + G 77 -3.6 -5.10497 | overlap 3312060 CCGACACGCCAACAT CGCTGT ATGAA GCGGCG TTTTTTCAGTGGATT ygiC 3311694 - 3312857 + | hypothetical protein ygiD 3313749 - 3312919 - | hypothetical protein TERM 4318 3314152 - 3314137 - g 80 -4.6 -5.00884 | overlap 3314141 ATCTGGTGCAAAAAA GGCAGC AGCC GCTTCC CGGCTCGATAAAACG ygiE 3313848 - 3314621 + | zinc transporter ZupT SC3135 3314864 - 3314688 - | hypothetical protein TERM 4319 3315618 - 3315608 - g 80 -4.6 -5.11389 | overlap 3315615 AGAATATAAAGAAAA CGGC AAA GCCA TGAAGGATGACTATG astJ 3315264 - 3317060 + | putative arylsulfate sulfotransferase TERM 4320 3317456 - 3317446 - g 91 -6.8 -5.1925 | opp_overlap 3317445 TCACAATTCAAAAAA GCGA AGT TCGC CTGGTATGCGGCTTA dsbA 3317080 - 3317751 + | putative thiol-disulfide isomerase and thioredoxin dsbI 3317766 - 3318443 + | putative disulfide oxidoreductase TERM 4321 3318493 - 3318458 - f 83 -9 -4.21142 | opp_overlap 3318463, overlap 3318463 ACCTGAATAGATAAA CCAAAGCAGAGGTCTG CATT CAGGCCTCTGCTTTTC TCACAATAATTTTAC TERM 4322 3318488 - 3318463 - f 95 -13.3 -4.20552 | opp_overlap 3318463, overlap 3318458 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4323 3318463 - 3318488 + F 100 -15.5 -4.3898 | opp_overlap 3318463 3318458 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4324 3318570 - 3318589 + F 100 -12.2 -5.02476 | opp_overlap 3318570 AAGGAATACAAAAAA GCCGATGA CATC TCATCGGC TTTTTTCAACCATGT TERM 4325 3318589 - 3318570 - f 100 -12.2 -5.50925 | opp_overlap 3318570 AAGGAATACAAAAAA GCCGATGA CATC TCATCGGC TTTTTTCAACCATGT SC3139 3318657 - 3319058 + | putative cytoplasmic protein TERM 4326 3319880 - 3319844 - g 100 -16.1 -3.54741 | opp_overlap 3319851, overlap 3319846 3319851 CACCAGGCCCTGAAA TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA GACAAAAAACTGTCA TERM 4327 3319878 - 3319846 - g 100 -16.5 -3.35046 | opp_overlap 3319851, overlap 3319844 3319851 CCAGGCCCTGAAATA CAAAACGCCCGATGA TGT TCATCAGGCGTTTTA CAGACAAAAAACTGT TERM 4328 3319873 - 3319851 - g 100 -14.2 -4.78848 | opp_overlap 3319851, overlap 3319846 3319844 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA TERM 4329 3319851 - 3319873 + G 91 -12 -4.07568 | opp_overlap 3319851 3319846 3319844 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA yis2 3319229 - 3319912 + | putative integrase protein ribB 3320582 - 3319929 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4330 3320297 - 3320325 + g 77 -8.1 -4.10429 | opp_overlap 3320302, overlap 3320300 3320302 3320318 CTTCAATGGTCACGG TAAAACCGGTGCC GTA GGCGCTGGTGTTG TTTTCCACCATCATT TERM 4331 3320300 - 3320322 + g 74 -7.6 -4.17762 | opp_overlap 3320302, overlap 3320297 3320302 3320318 CAATGGTCACGGTAA AACCGGTGCC GTA GGCGCTGGTG TTGTTTTCCACCATC TERM 4332 3320302 - 3320320 + g 76 -10.2 -3.68435 | opp_overlap 3320302, overlap 3320300 3320297 3320318 ATGGTCACGGTAAAA CCGGTGCC GTA GGCGCTGG TGTTGTTTTCCACCA TERM 4333 3321237 - 3321214 - g 71 -4.4 -4.58395 | overlap 3321215 3321216 CGCACCCGGGAAAAA CTGGCGCTGC TGGA GCAACGCCTC AGCGAACTGGAAGCT yqiC 3320674 - 3321315 + | putative cytoplasmic protein TERM 4334 3321346 - 3321319 - T 100 -9.8 -4.90906 | opp_overlap 3321324, overlap 3321320 3321321 CCACAAGAGTAAAAA CGTGAACGGGCC TGAC GGCCCGCTCATA TAAGATCTGAATAAT TERM 4335 3321345 - 3321320 - T 82 -11.1 -3.53459 | opp_overlap 3321324, overlap 3321319 3321321 CACAAGAGTAAAAAC GTGAACGGGCC TGAC GGCCCGCTCAT ATAAGATCTGAATAA TERM 4336 3321344 - 3321321 - T 86 -14.6 -2.70991 | opp_overlap 3321324, overlap 3321320 3321319 ACAAGAGTAAAAACG TGAACGGGCC TGAC GGCCCGCTCA TATAAGATCTGAATA glgS 3321593 - 3321390 - | glycogen synthesis protein GlgS SC3144 3321845 - 3321696 - | hypothetical protein TERM 4337 3322311 - 3322275 - g 75 -13 -2.60512 | gap 1, overlap 3322272 GGGAAGAGGAATTTA TCGGCGGCATGGC-GAT TATT ACCGGCCACGCCGCCGT CGCCGGTACACCTTG yqiJ 3321857 - 3322477 + | putative inner membrane protein yqiK 3322496 - 3324175 + | paral putative membrane protein TERM 4338 3324195 - 3324216 + T 100 -13.7 -5.9667 | CCGCTATATCTCCTG TCCCTGGCC ATAA GGCCGGGGA TTTTTTTATCTTTTT TERM 4339 3324396 - 3324377 - T 86 -11.4 -3.71649 | opp_overlap 3324377, overlap 3324360 3324370 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC TTTAATAAGGAAAGG TERM 4340 3324377 - 3324396 + T 79 -10 -3.72576 | gap 1, opp_overlap 3324360 3324370 3324377 GGCTGAAACGGGAAA GCCCC-TCC CGA GGAAGGGGC TTTAATAAGGAAAGG TERM 4341 3324488 - 3324510 + T 77 -9.1 -3.94051 | opp_overlap 3324487 3324485 3324482 AACAGCCAATCAGAG GGGGGAGAG ATCCC CTCTCACCC TTATTCCTTTACTTT TERM 4342 3324553 - 3324540 - T 83 -2.3 -5.76949 | TAGGTCGAAAAAAAA GCAGC GTCA ACCGC GAGATACGCGTCGAA TERM 4343 3324585 - 3324560 - T 72 -10.5 -2.89742 | gap 1 GTCAACCGCGAGATA CGCGTCGAAACA AAA TGTC-CGACGCG CCTTCAAAATCAGCG rfaE 3326067 - 3324634 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 4344 3324912 - 3324924 + g 70 -9.1 -3.72893 | opp_overlap 3324900 TAACCGGACGGCTTT CGCCT TTC AGGCG TTTAGTCGAGGCGTC TERM 4345 3325868 - 3325847 - G 72 -11.5 -3.13403 | opp_overlap 3325845, overlap 3325845 3325865 GCGGCGTCATCAATA CCCGTCAGG CCGA CCAGACGGG CGTTCGCTCCCAGAG glnE 3328958 - 3326115 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 4346 3328542 - 3328494 - G 70 -9.4 -3.67622 | overlap 3328490 3328496 CATGCCTAAAATCAA CAGCGGCTGCGGAACGCCCTGC GGGTT ACAGGGGGTTCCCCATTCGCGG CAACAGGCGGCATAC TERM 4347 3328540 - 3328496 - G 73 -10.6 -3.41359 | overlap 3328490 3328494 TGCCTAAAATCAACA GCGGCTGCGGAACGCCCTGC GGGTT ACAGGGGGTTCCCCATTCGC GGCAACAGGCGGCAT ygiF 3330377 - 3329076 - | hypothetical protein ygiM 3330619 - 3331233 + | putative signal transduction protein TERM 4348 3331482 - 3331467 - g 70 -9 -3.76176 | CAAACTCACGAAGAA TACGCG CTGG CGCGTA CTGAGCGTAAATCCG TERM 4349 3331704 - 3331714 + G 77 -8.2 -4.08692 | overlap 3331703 3331705 CCCTTGCGCGTATTG CGCG TGG CGCG TTTTGCCGCCCGTTA TERM 4350 3332123 - 3332090 - g 73 -5.1 -4.62471 | gap 1, overlap 3332091 3332092 CTTAACGCCGAAAAA CCTCTGGCCGCG-CCA TCA TGGTCACGGCCCGGCG GGCGTGAAACTGGTC cca 3331296 - 3332537 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 4351 3332570 - 3332539 - T 86 -11.6 -3.64703 | opp_overlap 3332533 CCCCCGCCAGCTAAA CGCCATCCGGCA CGATAAAT TGCCTGATGGCG CTGCGCTTATCAGAC TERM 4352 3332623 - 3332610 - T 73 -9.5 -3.30243 | AGTTAGGCCGGACAA GGCGG TACG CCGCC ATCCGGCACGGTCAA uppP 3333466 - 3332642 - | undecaprenyl pyrophosphate phosphatase folB 3333923 - 3333561 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase ygiH 3334027 - 3334638 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 4353 3334854 - 3334876 + T 100 -11.2 -4.7416 | overlap 3334855 TTGCTGTAAACCCGT TGGGGCGGCA TGA TGTCGCCCCC TTTTTCCGCTTTTAC TERM 4354 3334855 - 3334875 + T 93 -14.7 -3.43411 | overlap 3334854 TGCTGTAAACCCGTT GGGGCGGCA TGA TGTCGCCCC CTTTTTCCGCTTTTA gcp 3335901 - 3334888 - | O-sialoglycoprotein endopeptidase TERM 4355 3335311 - 3335279 - G 74 -4.8 -4.77757 | gap 1, overlap 3335283 CCGGAAAAACTAAAA TCCAGCCCCGGACGA TCGG TCATCGGGCGC-GGA AAGACAAAACGCCCC TERM 4356 3336096 - 3336079 - H 74 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3336129 - 3336344 + | 30S ribosomal protein S21 TERM 4357 3336391 - 3336423 + F 80 -7 -4.62475 | gap 1, overlap 3336394 TCGAGTTGTAGTTGT AAGGCCGTGC-TTCC GAAA GGAATGCGCGGCTTG TTTTCGTTTATGCAT TERM 4358 3336394 - 3336420 + F 95 -10.9 -4.40882 | gap 1, overlap 3336391 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTGTTTTCGTTTATG TERM 4359 3336722 - 3336750 + G 70 -5.4 -4.45517 | gap 1, opp_overlap 3336721 3336720 3336738 3336748, overlap 3336738 3336740 ATAATGAGAAAACCC CT-TCTTTCACCG TAAA CGGTGAAAAACAG TTTTATCACTGCTTT TERM 4360 3337026 - 3337043 + G 71 -9.9 -3.61536 | opp_overlap 3337014 AAAGCGCGGTCTGAG CGCTGAA ATTA TTCAGCG TTTCGCCATTGGCTT dnaG 3336580 - 3338325 + | DNA primase TERM 4361 3338442 - 3338420 - g 74 -10.6 -3.53012 | TGCCCTCGCTTTAAA TGTCGACAGC TAT ACCGTCGACA CCAATCAAACGAATA TERM 4362 3339092 - 3339072 - g 80 -10.3 -3.83155 | overlap 3339074 GACGAAGATGAAGAA GACGGCGAC GAT GACGCCGCC GATGACGACAACAGC TERM 4363 3339093 - 3339074 - g 85 -12.8 -3.49169 | overlap 3339072 CGAAGATGAAGAAGA CGGCGACG ATGA CGCCGCCG ATGACGACAACAGCA rpoD 3338340 - 3340316 + | RNA polymerase sigma factor RpoD TERM 4364 3340353 - 3340336 - T 100 -14.1 -3.95073 | opp_overlap 3340336 CCGCACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTATCAGGCCA TERM 4365 3340336 - 3340353 + T 100 -14.1 -5.24129 | opp_overlap 3340336 CCGCACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTATCAGGCCA TERM 4366 3340423 - 3340408 - T 72 -10.4 -2.90219 | opp_overlap 3340406 CAGAATCTCTACACA GCGCGA GTAT TCGCGC CCTCATTCCCCATTG mug 3340945 - 3340439 - | G/U mismatch-specific DNA glycosylase TERM 4367 3341175 - 3341192 + r 100 -11.3 -5.72622 | opp_overlap 3341171 3341175 AAATCATATAATTAA GCCACTC TAAA GAGTGGC TTTTTTGTTTCTGAC TERM 4368 3341192 - 3341175 - R 82 -11.3 -3.5275 | opp_overlap 3341175, overlap 3341171 AAATCATATAATTAA GCCACTC TAAA GAGTGGC TTTTTTGTTTCTGAC yqjH 3341993 - 3341226 - | hypothetical protein TERM 4369 3342636 - 3342622 - g 100 -7.8 -5.40072 | GCGGGCGGAAAAAAA TCGCGA TTA CCGCGA ACGGCGCGCAATGGC TERM 4370 3342783 - 3342731 - g 71 -4.9 -4.67353 | GGAGCTACGTAAAAA TCCGCAGATGAAGC-GGGCGCTGGA TAACT TCAAG-GCCGTGCTGGATCTGCGGA TAAACCACAGCGATA yqjI 3342225 - 3342872 + | putative transcriptional regulator mcp2 3344434 - 3342869 - | putative methyl-accepting chemotaxis protein TERM 4371 3344795 - 3344755 - R 100 -17.1 -2.78384 | gap 2, opp_overlap 3344758 3344760, overlap 3344758 3344760 CCGCCTTCTATCAGA GCACATCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGATGT-C ATTACCGTTGCGACC TERM 4372 3344793 - 3344758 - R 100 -19.9 -2.66316 | gap 1, opp_overlap 3344758 3344760, overlap 3344755 3344760 CCTTCTATCAGAGCA CATCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGATG TCATTACCGTTGCGA TERM 4373 3344758 - 3344793 + r 100 -19.9 -2.75481 | gap 1, opp_overlap 3344755 3344758 3344760, overlap 3344760 CCTTCTATCAGAGCA CATCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGATG TCATTACCGTTGCGA TERM 4374 3344791 - 3344760 - R 100 -16.7 -2.87468 | gap 1, opp_overlap 3344760 3344758, overlap 3344758 3344755 TTCTATCAGAGCACA TCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGA TGTCATTACCGTTGC TERM 4375 3344760 - 3344791 + r 100 -16.7 -2.92246 | gap 1, opp_overlap 3344758 3344755 3344760, overlap 3344758 TTCTATCAGAGCACA TCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGA TGTCATTACCGTTGC aer 3346342 - 3344822 - | aerotaxis sensor receptor, senses cellular redox state or proton motive force SC3164 3346354 - 3346509 + | hypothetical protein TERM 4376 3347613 - 3347595 - g 70 -6.6 -4.08144 | TGGATGAAGTACAAA CCGGCATG GGG CGTACCGG CAAGATGTTTGCCTG TERM 4377 3347868 - 3347858 - g 74 -2.4 -5.07486 | CAGGCGGAACAAAAA GGCG ATA CGCT CCTGGATGGTTTTCG oat 3346745 - 3348151 + | putrescine--2-oxoglutarate aminotransferase TERM 4378 3349472 - 3349446 - g 70 -2.9 -4.70659 | gap 1, opp_overlap 3349430 3349465 3349469, overlap 3349449 3349450 GGCCATACGCAAAAA GAATCTG-GCCG TTGT CGGCGCAGGCCC GGCGGGGCTGGCTTT fadH 3348322 - 3350340 + | 2,4-dieonyl-coa reductase TERM 4379 3350370 - 3350420 + T 83 -13.5 -3.29144 | overlap 3350348 3350370 GGCGCTGCGCTTATC GG-GCTTACGTCGTCATACCGGTTT TAT AGGCCGGTATGACG-CTTGAGCGCC TTATCGACGGCGTCC TERM 4380 3350370 - 3350419 + T 83 -13.7 -2.57344 | gap 1, overlap 3350348 3350370 GGCGCTGCGCTTATC GGGCTTACGTCGTCATACCGGTTT TAT AGGCCGGTATGACG-CTTGAGCGC CTTATCGACGGCGTC ygjO 3351557 - 3350421 - | hypothetical protein ygjP 3351643 - 3352140 + | hypothetical protein TERM 4381 3352642 - 3352658 + G 90 -4.4 -5.39755 | gap 1, overlap 3352645 GCTGATAGCGAAAGG TGTGCCG GAAG CGGC-CA TTTTTTGTGATTATG ygjQ 3352292 - 3352984 + | putative integral membrane protein TERM 4382 3353014 - 3352987 - f 74 -6.9 -4.25104 | TTCTCGCCAGTAAAA TGCCAGAGTGC GTCGCA GCGCACTGGCA AGGGCGGAAAGGCGT ygjR 3353073 - 3354071 + | putative dehydrogenase TERM 4383 3354213 - 3354240 + F 93 -12.2 -3.8211 | opp_overlap 3354217, overlap 3354217 GTCACCGGGCAGCCA TAAAGGAATGCG TCAG CGTATTCCTTTA TTGTTGTAAGTGAGA TERM 4384 3354217 - 3354236 + F 81 -8.6 -4.52415 | opp_overlap 3354217, overlap 3354213 CCGGGCAGCCATAAA GGAATGCG TCAG CGTATTCC TTTATTGTTGTAAGT TERM 4385 3354275 - 3354254 - f 86 -14.5 -2.52676 | opp_overlap 3354256 TATTGTTGTAAGTGA GACCTTGCC GAAT GGCAAGGTC TATGCATAAAAGCAG TERM 4386 3354256 - 3354273 + F 74 -11.3 -2.91264 | opp_overlap 3354254 TTGTTGTAAGTGAGA CCTTGCC GAAT GGCAAGG TCTATGCATAAAAGC TERM 4387 3354317 - 3354290 - f 71 -9.8 -3.18788 | opp_overlap 3354291, overlap 3354288 3354287 3354291 CTATGCATAAAAGCA GCGGCTAATGCC ATTC GGCGTTAGCCGT TTTTTTTGCATAGGG TERM 4388 3354316 - 3354291 - f 80 -13.3 -2.50791 | opp_overlap 3354291, overlap 3354290 3354288 3354287 TATGCATAAAAGCAG CGGCTAATGCC ATTC GGCGTTAGCCG TTTTTTTTGCATAGG TERM 4389 3354291 - 3354316 + F 100 -15.5 -5.81412 | opp_overlap 3354291 3354290 3354288 3354287 TATGCATAAAAGCAG CGGCTAATGCC ATTC GGCGTTAGCCG TTTTTTTTGCATAGG ygjT 3354340 - 3355308 + | putative resistance protein TERM 4390 3355368 - 3355342 - f 93 -10.8 -4.56597 | opp_overlap 3355342 CTGCCCCGTCAAAAA CGCCCGGCAG CGCACAC CTGTCGGGCG TTTTTGTTTAACATG TERM 4391 3355342 - 3355368 + F 100 -13 -5.28942 | opp_overlap 3355342 CTGCCCCGTCAAAAA CGCCCGGCAG CGCACAC CTGTCGGGCG TTTTTGTTTAACATG ygjU 3355563 - 3356807 + | serine/threonine transporter SstT TERM 4392 3357378 - 3357394 + G 73 -5 -4.65895 | TGTTTCTGGAAAATG GGCTGC TCCCT GCCGCC TTTTTGCCTGGCGAC TERM 4393 3357619 - 3357645 + G 85 -8.7 -4.45577 | opp_overlap 3357617 3357619 CCTTTTCCATAAACA CGGCCTGTCGG CACTA TTGATAGGCCG TTTTATCGCGTTTGT yqjA 3357257 - 3357919 + | DedA family, membrane protein TERM 4394 3358275 - 3358257 - g 76 -8.8 -4.0251 | ACGATGACAACGAAA CGGTACAG TGG CTGTCCCG CTTACGGGAAAGCTC yqjB 3357923 - 3358306 + | hypothetical protein TERM 4395 3358392 - 3358374 - f 76 -7.4 -4.27441 | opp_overlap 3358373 3358370 3358374 ACTATGATTAATAAA GCGGTG TTTAACC CACCGC GTTATTATCGGGATC yqjC 3358451 - 3358819 + | hypothetical protein yqjD 3358861 - 3359166 + | hypothetical protein yqjE 3359169 - 3359567 + | hypothetical protein TERM 4396 3359653 - 3359597 - g 71 -7.2 -3.99805 | opp_overlap 3359616, overlap 3359592 3359627 CGCGAAAAACGTAAA GCG-CTGCTTCTCAGTCAGATCCAGCAG CAA CGGCTGGATCTGTCCGCC-AGCCGTCGC GACTGGCTGGAGACC yqjK 3359564 - 3359863 + | hypothetical protein TERM 4397 3359880 - 3359917 + F 100 -20.7 -4.45485 | opp_overlap 3359883, overlap 3359883 ATCTTTTCTTTTATA GCATCGCGCCATCAGGT TATC ACCTGGTGGCGCGATAC TTTTATGCATATCGT TERM 4398 3359883 - 3359914 + F 100 -21 -3.1919 | opp_overlap 3359883, overlap 3359880 TTTTCTTTTATAGCA TCGCGCCATCAGGT TATC ACCTGGTGGCGCGA TACTTTTATGCATAT TERM 4399 3359914 - 3359883 - f 100 -18.8 -2.62184 | opp_overlap 3359883 3359880 TTTTCTTTTATAGCA TCGCGCCATCAGGT TATC ACCTGGTGGCGCGA TACTTTTATGCATAT yqjF 3360008 - 3360493 + | putative membrane-associated protein TERM 4400 3360536 - 3360517 - f 89 -6.4 -5.28481 | opp_overlap 3360512 3360517, overlap 3360526 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTCATCTGAAG TERM 4401 3360517 - 3360536 + F 75 -6.4 -4.50976 | opp_overlap 3360517 3360526, overlap 3360512 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTCATCTGAAG TERM 4402 3361553 - 3361570 + F 93 -12.7 -3.73647 | CTTTGGCTAATTTCA GGCGTCC TCCG GGACGCC TTATTAATAAATACC yhaH 3361671 - 3362036 + | hypothetical protein TERM 4403 3362037 - 3362073 + T 95 -10.9 -4.64861 | gap 1, opp_overlap 3362061, overlap 3362039 3362042 AAACGCTTTTCCTGA TGGCGGCGCGGCGC CGCTTTTAAA GCGCCGCGC-GCTA TTTATTTTCCGGCGA TERM 4404 3362039 - 3362053 + T 95 -12.8 -4.07568 | overlap 3362037 3362042 ACGCTTTTCCTGATG GCGGCG CGG CGCCGC TTTTAAAGCGCCGCG TERM 4405 3362042 - 3362071 + T 100 -14.3 -3.93868 | gap 1, opp_overlap 3362061, overlap 3362039 3362037 CTTTTCCTGATGGCG GCGCGGCGCCGCTT TTA AAGCGCCGC-GCGC TATTTATTTTCCGGC yhaJ 3362971 - 3362075 - | LysR family transcriptional regulator TERM 4406 3363219 - 3363231 + G 76 -10.5 -3.65542 | opp_overlap 3363207, overlap 3363217 GAACCAGGAAGTGCT GGCGC CGG GCGCC TCTTTTCAGCCTCGA yhaK 3363076 - 3363777 + | hypothetical protein yhaL 3363801 - 3363965 + | hypothetical protein yhaN 3365388 - 3364078 - | hypothetical protein yhaO 3366745 - 3365414 - | HAAAP family transport protein TERM 4407 3365756 - 3365743 - G 70 -5.2 -4.46233 | overlap 3365754 GGAATCCTAAATAAA CGCC AAAGAA GGCG GTCATGACGGCAAAG TERM 4408 3366555 - 3366545 - G 74 -3.2 -4.88711 | overlap 3366554 AGAAGAGAGTAAAAA GACC CAA AGTC CCATCAGGCCAACCT TERM 4409 3366603 - 3366586 - G 79 -2.7 -5.16841 | GGACAGGAAGAAAAA CGATC CCTGCGCC GATCG CCATCCCGATACTCA TERM 4410 3366999 - 3366980 - R 100 -9.2 -5.58179 | opp_overlap 3366980 3366981, overlap 3366981 TATCACAACAAAAAA TGGCGCAC TTTG GTGCGCCC TTTTCTCAGCTTCTG TERM 4411 3366980 - 3366999 + r 86 -9.2 -4.43859 | opp_overlap 3366980 3366981, overlap 3366981 TATCACAACAAAAAA TGGCGCAC TTTG GTGCGCCC TTTTCTCAGCTTCTG TERM 4412 3366998 - 3366981 - R 95 -12.7 -3.9328 | opp_overlap 3366980 3366981, overlap 3366980 ATCACAACAAAAAAT GGCGCAC TTTG GTGCGCC CTTTTCTCAGCTTCT TERM 4413 3366981 - 3366998 + r 81 -12.7 -3.25592 | opp_overlap 3366981 3366980, overlap 3366980 ATCACAACAAAAAAT GGCGCAC TTTG GTGCGCC CTTTTCTCAGCTTCT tdcG 3368424 - 3367060 - | L-serine deaminase TERM 4414 3368458 - 3368493 + r 78 -11.9 -3.06915 | gap 1, opp_overlap 3368456 CGTTCAGTGAAGATC CGT-CGCGGGGCGATC CACAC GATCGCCCCGTTCACG TTACATCGCCTGAGT tdcE 3370788 - 3368494 - | pyruvate formate-lyase 4/ 2-ketobutyrate formate-lyase TERM 4415 3370316 - 3370284 - G 91 -14.1 -3.05294 | opp_overlap 3370274, overlap 3370274 3370265 GCAAACCGGTTAATA CGCCGGATTTACGGC AGC GCAGCATATCCGGCG AGTAAACATCGAATA tdcD 3372030 - 3370822 - | propionate/acetate kinase tdcC 3373428 - 3372097 - | threonine/serine transporter TdcC tdcB 3374438 - 3373449 - | threonine dehydratase TERM 4416 3374089 - 3374099 + g 74 -6.8 -4.35524 | opp_overlap 3374083, overlap 3374083 GCCGAATAATCACAG GTGG CCG CCAC TTTTGACTTTGGCGC tdcA 3375474 - 3374536 - | DNA-binding transcriptional activator TdcA SC3192 3376233 - 3376015 - | hypothetical protein TERM 4417 3376182 - 3376156 - GH 70 -10.3 -2.57344 | gap 1, opp_overlap 3376162, overlap 3376162 CACCGGCCTGATAAG CA-AAAACCCGC CGAA GCGGGTTTTATG AAGAAGTGAAGCTGA TERM 4418 3376162 - 3376175 + gH 87 -9.5 -4.3739 | opp_overlap 3376156 3376162 CCTGATAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAAGTG TERM 4419 3376175 - 3376162 - GH 100 -9.5 -4.93365 | opp_overlap 3376162, overlap 3376156 CCTGATAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAAGTG SC3193 3376188 - 3376574 + | hypothetical protein garK 3377738 - 3376593 - | glycerate kinase I TERM 4420 3376989 - 3377013 + g 70 -9.1 -3.65827 | overlap 3376990 CGCCCCCATACCGCC TGCCGCGCCTG CGC CGGGCGCCGCC TTTACGTCGACATTC TERM 4421 3376990 - 3377012 + g 76 -12.6 -2.79175 | overlap 3376989 GCCCCCATACCGCCT GCCGCGCCTG CGC CGGGCGCCGC CTTTACGTCGACATT TERM 4422 3377389 - 3377351 - G 84 -12.5 -3.33261 | CGCCAATGCCGATAA TGATATTGCTTGCGCCG CTTTC CAGCGCCTGCAATATCA GCTCCCCCGTTCCCC TERM 4423 3377827 - 3377799 - R 71 -10.2 -2.64803 | overlap 3377796 3377795 CCAGCCTGAAATTCA GGCCCGGATCGC TACAC GCCATCCGGGCA CAACGTCGTTAGCGA garR 3378726 - 3377836 - | tartronate semialdehyde reductase TERM 4424 3378199 - 3378210 + g 73 -5.8 -4.42788 | CAACGCCACGATCAC CTGG TTAG CCAG TTTTGTGACGTTGCC TERM 4425 3378396 - 3378410 + g 71 -10 -3.57561 | CAACGCCCTTCGCCT TCAGCG CAT CGCTGA TTTCACGGCTTGCCA garL 3379522 - 3378752 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase TERM 4426 3378883 - 3378900 + g 76 -12.7 -2.71712 | opp_overlap 3378881 3378880, overlap 3378868 3378882 CCGGCGCCAGAATGC CGCACGG TTTA CCGTGCG CTTTAGCGCGGGCGA TERM 4427 3379037 - 3379006 - G 90 -8 -4.82901 | TTGGGCCGACAAAAA TGCCATCAACGC CTTCCGTT GCGGCGATGGCA TCAACATTGTCGACA TERM 4428 3380080 - 3380090 + H 81 -8.2 -4.53303 | opp_overlap 3380079 AAATTCGCTAGGAAT CGCC ATC GGCG TTTTATATAAAAATA TERM 4429 3380723 - 3380703 - H 100 -12.5 -4.56597 | overlap 3380705 CTCGGTTGCGAAAAA CTGCAGCCG GAA CGGCTGCTG GAAGGCACCGAGGAT TERM 4430 3380721 - 3380705 - H 83 -13.7 -2.60032 | overlap 3380703 CGGTTGCGAAAAACT GCAGCCG GAA CGGCTGC TGGAAGGCACCGAGG TERM 4431 3380898 - 3380878 - H 79 -10.3 -3.57263 | AGCGCCAGCGCGAAA CCTGCCCGG CCT CCGAGCTGG TCGTCGGGATGCAAT TERM 4432 3381293 - 3381273 - H 72 -8.2 -3.72893 | opp_overlap 3381255 3381253 CAGCGCCCCACCAAA CGCGGCCT GATTT ACGCCGCG ACGCCCGCCAGCGAT TERM 4433 3381671 - 3381699 + H 100 -9.6 -5.055 | gap 1, overlap 3381673 ACCGCATAATCTGTA GACCGGGTAAGCG CCAG CGCT-ACCCGGTA TTTTTTCGCCCTTAG TERM 4434 3381673 - 3381697 + H 95 -12.2 -4.15235 | gap 1, overlap 3381671 CGCATAATCTGTAGA CCGGGTAAGCG CCAG CGCT-ACCCGG TATTTTTTCGCCCTT TERM 4435 3381728 - 3381746 + H 84 -5.3 -5.42259 | opp_overlap 3381731 AGTCTGTAGCCTGAA GTATGTC TGCCC GACATGC TTTTTTTACGCCTAA TERM 4436 3381872 - 3381861 - H 76 -4.4 -4.96996 | TTCAAAGAAAACAAA CGAA AGAT TTCG GAGGAAGGATGTTTA TERM 4437 3382393 - 3382380 - g 78 -2.3 -5.25803 | opp_overlap 3382381, overlap 3382381 AATTTGTAGAAAAAA CGGGT ATCG ACTCG TTAGCCATTGCTATC gatY 3381881 - 3382735 + | tagatose-bisphosphate aldolase gatZ 3382856 - 3384127 + | putative tagatose 6-phosphate kinase 1 ptkA 3384142 - 3384606 + | galactitol-specific PTS system component IIA ptkB 3384637 - 3384921 + | galactitol-specific PTS system component IIB ptkC 3384925 - 3386298 + | PTS family galactitol-specific enzyme IIC gadD 3386342 - 3387385 + | galactitol-1-phosphate dehydrogenase gadR 3387496 - 3388269 + | transcriptional regulator of sugar metabolism yraL 3389290 - 3388427 - | hypothetical protein TERM 4438 3389349 - 3389338 - H 79 -3 -5.41143 | overlap 3389341 CATTGCGTAAAAAAA TATC ACTG GATA CAGTATGGTACCCTC TERM 4439 3390819 - 3390797 - gH 80 -6.2 -4.8048 | GTGTTACAGCAAAAA TTCGGCTCCG TAG CTGAGCTGAA AATGGGCGTGAACGG yraM 3389354 - 3391396 + | paral putative transglycosylase TERM 4440 3391446 - 3391405 - gf 72 -9.3 -3.61268 | gap 1, overlap 3391397 3391408 CAGCTAACGCGTAAA CAGGCTGGCGACGCGTGGGA AGC TGCCGCGCGTCGCTGGC-TG GAAAGCAAAGGACTG TERM 4441 3391444 - 3391408 - gf 76 -12.1 -2.62667 | overlap 3391397 3391405 CTAACGCGTAAACAG GCTGGCGACGCGTGGGA AGC TGCCGCGCGTCGCTGGC TGGAAAGCAAAGGAC yraN 3391354 - 3391749 + | hypothetical protein yraO 3391771 - 3392361 + | DnaA initiator-associating protein DiaA yraP 3392371 - 3392946 + | hypothetical protein yraR 3393681 - 3393013 - | hypothetical protein TERM 4442 3393937 - 3393920 - g 89 -3.3 -5.72207 | GTGAAAGGAAAAAAA GGCGAGG CCAG CGTCACC ATTGATAAGGCTATT yhbO 3393779 - 3394297 + | hypothetical protein yhbP 3394720 - 3394277 - | hypothetical protein yhbQ 3394713 - 3395075 + | GIY-YIG nuclease superfamily protein yhbS 3395565 - 3395062 - | ABC transporter membrane protein yhbT 3396083 - 3395559 - | hypothetical protein TERM 4443 3396356 - 3396369 + G 80 -9.5 -4.06491 | opp_overlap 3396356 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4444 3396369 - 3396356 - g 83 -9.5 -4.18018 | opp_overlap 3396356 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4445 3396478 - 3396438 - g 95 -3.4 -5.81412 | gap 2 TTTACCGAAAAAAAA TTGCAG-GAAGC-GGTGA GTTTTGT TCACCAGCATCGCCGCAA ATTACACATCGCCAT yhbU 3396300 - 3397295 + | putative protease yhbV 3397286 - 3398182 + | hypothetical protein TERM 4446 3398235 - 3398258 + F 72 -8.2 -3.81349 | gap 1, opp_overlap 3398203 3398202 3398200, overlap 3398233 TAGCGATCCCGTAGG CCTGATAAGCG CAG CGCT-ATCGGG TATTGTTTTTACCGT TERM 4447 3399264 - 3399230 - g 71 -8.4 -3.89215 | overlap 3399224 GGTGATAAAGCGAAA GTCCGCCACGGGCTGG AAT CCATCCTGCGGGAGAC CCAGGCGGATGAAAT yhbW 3398360 - 3399367 + | hypothetical protein yafK 3400064 - 3399345 - | putative inner membrane protein TERM 4448 3399375 - 3399411 + g 100 -7.3 -5.42259 | opp_overlap 3399376, overlap 3399376 TGGGCTGATTTTATA ACGCCGATTTTCAAC GGTGATG GTTGGCAATCGGCGA TTTTTTTCGAAGTAA TERM 4449 3399376 - 3399410 + g 80 -10.8 -3.84633 | opp_overlap 3399376, overlap 3399375 GGGCTGATTTTATAA CGCCGATTTTCAAC GGTGATG GTTGGCAATCGGCG ATTTTTTTCGAAGTA TERM 4450 3399475 - 3399487 + g 73 -9.1 -3.77927 | overlap 3399474 TATTCCGGCCATGCT TGCGC CTG GCGCA TATTTTCGTCATTCA TERM 4451 3399721 - 3399734 + g 74 -6.7 -4.25056 | TGATAGCGGCTGTTT GGGTT AAGC AACCC TTTGTTGGTGGCATA TERM 4452 3400014 - 3400002 - G 75 -3.5 -4.88067 | AGTGAGCCAGAAAAA TTTTA AAA TAAAA GCGATAAACAGGCTC SC3219 3400223 - 3400753 + | putative cytoplasmic protein TERM 4453 3400781 - 3400805 + T 74 -11.5 -2.79684 | opp_overlap 3400780 3400779 GACTTGTGAAATATT GCCGGATGA AAACAGC TCATCCGGC TCGTTCAATTACTGG mtr 3402058 - 3400814 - | tryptophan permease TERM 4454 3402140 - 3402174 + r 82 -7.8 -4.55798 | opp_overlap 3402146, overlap 3402142 3402144 3402146 AGTACAAAAGAAATA AAAAAAGCCCCGATTG TGA CGATCGGGGCTGTATA TTTTACTTTACGCTG TERM 4455 3402142 - 3402172 + r 84 -10.4 -3.88396 | opp_overlap 3402146, overlap 3402140 3402144 3402146 TACAAAAGAAATAAA AAAAGCCCCGATTG TGA CGATCGGGGCTGTA TATTTTACTTTACGC TERM 4456 3402144 - 3402170 + r 90 -13 -3.51998 | opp_overlap 3402146, overlap 3402142 3402140 3402146 CAAAAGAAATAAAAA AAGCCCCGATTG TGA CGATCGGGGCTG TATATTTTACTTTAC TERM 4457 3402146 - 3402168 + r 100 -15.6 -3.31476 | opp_overlap 3402146, overlap 3402144 3402142 3402140 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT TERM 4458 3402168 - 3402146 - R 100 -13.4 -6.11392 | opp_overlap 3402144 3402142 3402140 3402146 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT deaD 3404101 - 3402212 - | ATP-dependent RNA helicase DeaD TERM 4459 3402933 - 3402943 + g 73 -5.4 -4.56597 | AGTTGCTGTTGAACT TTCG CGG CGAA TTTTTCCAGACGGCG TERM 4460 3404246 - 3404221 - R 73 -7.5 -4.04023 | overlap 3404222 ATTAACGAACAACAA CGCCCTCACCC GCGA AGGTGATGGCA ATCAAAAAGATTACG nlpI 3405164 - 3404280 - | lipoprotein NlpI TERM 4461 3405235 - 3405269 + r 76 -12 -2.56715 | opp_overlap 3405242, overlap 3405230 AAGGCGTCCAGCCAG GTCTAAAGCCCTCCGC ACT GCGGAGGGCAAAAGGC TACCTTACTCGGCCT TERM 4462 3405262 - 3405242 - R 100 -18.3 -3.57792 | opp_overlap 3405235 3405230 CCAGCCAGGTCTAAA GCCCTCCGC ACT GCGGAGGGC AAAAGGCTACCTTAC pnp 3407439 - 3405274 - | polynucleotide phosphorylase/polyadenylase TERM 4463 3407628 - 3407612 - R 100 -10.8 -5.00884 | opp_overlap 3407611 3407609 3407612 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC TERM 4464 3407612 - 3407628 + r 71 -10.8 -2.71422 | opp_overlap 3407612, overlap 3407611 3407609 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC rpsO 3407920 - 3407651 - | 30S ribosomal protein S15 TERM 4465 3407755 - 3407776 + g 84 -2.9 -5.34555 | opp_overlap 3407748 3407757, overlap 3407757 3407758 AAACCATACGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTATGCTCTGC truB 3409015 - 3408071 - | tRNA pseudouridine synthase B TERM 4466 3408872 - 3408904 + g 75 -12.6 -2.6176 | overlap 3408871 GCCGGTCGCCAGCGG GTCCAGCGCGCCGG TATGC CCGGCGCGGTTGGC ATTGTAGATGCGCTT rbfA 3409416 - 3409015 - | ribosome-binding factor A TERM 4467 3409446 - 3409460 + r 88 -8.5 -4.86939 | opp_overlap 3409446 AATAAAGACAAAAAA GGGGC CATAA GCCCC TTTTTAAATTTCTTG TERM 4468 3409460 - 3409446 - R 100 -9.2 -5.61913 | opp_overlap 3409446 AATAAAGACAAAAAA GGGGCC ATA AGCCCC TTTTTAAATTTCTTG infB 3412315 - 3409637 - | translation initiation factor IF-2 TERM 4469 3411503 - 3411514 + g 84 -5.8 -5.00616 | ATCGGCTTTGGATTC GGCA TGTT TGCC TTTTTTCGCCGGACG TERM 4470 3412166 - 3412156 - G 74 -8.2 -3.96624 | opp_overlap 3412139 TATCGGGACCAGAAA CCGC TTC GCGG TTCAGGTGCGCCAGT nusA 3413842 - 3412340 - | transcription elongation factor NusA TERM 4471 3413783 - 3413794 + g 75 -3.6 -4.8622 | TTCAAAAATTTTTTC GCGT GGCA GCGC TTTTTCGTTGGAGAC yhbC 3414322 - 3413870 - | hypothetical protein TERM 4472 3414359 - 3414347 - H 93 -6.9 -5.80248 | opp_overlap 3414346 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4473 3414388 - 3414403 + H 72 -10.4 -2.79878 | opp_overlap 3414388, overlap 3414387 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA TERM 4474 3414403 - 3414388 - H 100 -10.4 -5.60689 | opp_overlap 3414388 3414387 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA argG 3414950 - 3416293 + | argininosuccinate synthase TERM 4475 3416310 - 3416325 + T 100 -11.8 -5.24129 | CATTTATCATTTTAA GGCCGC GAAA GCGGCC TTTTTTATGCGCGGA TERM 4476 3416485 - 3416450 - T 77 -10.6 -3.39301 | opp_overlap 3416458 3416460, overlap 3416460 ACCACAAATAACAGA CGAAAAAAAAGACGCT TTTC AGCGTCTCTTTTCTGG AATATTGGTACCGAG TERM 4477 3416458 - 3416477 + T 75 -6.4 -4.42619 | opp_overlap 3416450 3416460, overlap 3416460 TAACAGACGAAAAAA AAGACGCT TTTC AGCGTCTC TTTTCTGGAATATTG TERM 4478 3416475 - 3416460 - T 100 -9 -5.92337 | opp_overlap 3416458 3416460, overlap 3416450 ACAGACGAAAAAAAA GACGCT TTTC AGCGTC TCTTTTCTGGAATAT TERM 4479 3416460 - 3416475 + T 76 -9 -3.81279 | opp_overlap 3416460 3416450, overlap 3416458 ACAGACGAAAAAAAA GACGCT TTTC AGCGTC TCTTTTCTGGAATAT secG 3416923 - 3416591 - | preprotein translocase subunit SecG TERM 4480 3417111 - 3417126 + r 100 -11.8 -4.77157 | TTTTGCGGGCCGTAA GGCGGC AACC GCCGCC TTTTTAGTCACTTAA glmM 3418483 - 3417146 - | phosphoglucosamine mutase TERM 4481 3419390 - 3419371 - R 100 -7 -5.86609 | opp_overlap 3419371 TTAAAAAAAGAAAAA CCTCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA hflB 3421373 - 3419430 - | ATP-dependent metalloprotease TERM 4482 3420462 - 3420430 - G 83 -9.7 -4.11394 | opp_overlap 3420421, overlap 3420416 3420447 ACCTGACGGTCAAAA CGGCCTGGACGCAGC AAC GCCGGGTCAAGGACG TCCGGACGGTTGGTT rrmJ 3422094 - 3421468 - | 23S rRNA methyltransferase J TERM 4483 3421996 - 3422008 + g 77 -4.7 -4.84761 | opp_overlap 3421987 3421990, overlap 3421990 TTTAAACCAGGCACG GGAGC GTA GCCCC TTTTTCTGCGCCTGT TERM 4484 3422262 - 3422245 - g 90 -4.9 -5.34309 | gap 1 AGTACTAAACAAAAA CAGCACCT AAA AGGT-CTG GCACATCCGCTCAAG yhbY 3422182 - 3422514 + | RNA-binding protein YhbY TERM 4485 3422600 - 3422627 + T 86 -13.6 -3.25946 | gap 1, opp_overlap 3422607, overlap 3422607 CACGCTCTCTCCGTT GATAAAAGGCCGC TAT GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4486 3422621 - 3422607 - T 95 -12.8 -4.36914 | opp_overlap 3422607 3422600 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA TERM 4487 3422607 - 3422621 + T 100 -12.8 -5.13137 | opp_overlap 3422607, overlap 3422600 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA greA 3423146 - 3422670 - | transcription elongation factor GreA TERM 4488 3422708 - 3422719 + g 77 -7.2 -4.25104 | CTTCGTATTCCACAT CGCC GCCA GGCG TTTTGATCACCACGA TERM 4489 3423865 - 3423835 - g 71 -7.4 -3.97947 | GCCAGCCACGATAAA GCGCCAGGCTGGCC GTG GAACGACCTGACGC AGTGTTTCAGCGCGC TERM 4490 3424376 - 3424408 + G 71 -10.5 -3.28712 | overlap 3424377 TTAACGTGCCTGGCA CCTGGCGGGCGGGAT CGG ATGCCGTTCGCCAGA TTCTGCGCCAACAGG TERM 4491 3424377 - 3424407 + G 81 -14 -2.57132 | overlap 3424376 TAACGTGCCTGGCAC CTGGCGGGCGGGAT CGG ATGCCGTTCGCCAG ATTCTGCGCCAACAG dacB 3423394 - 3424827 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 4492 3424886 - 3424915 + T 76 -7.7 -4.37092 | opp_overlap 3424891, overlap 3424891 CTACAACGAACATAA TAAAACGGGCCGC AAAT GCGGCCCGTTGGC TTTTATAGGCCGGAT TERM 4493 3424891 - 3424910 + T 100 -16.4 -3.41587 | opp_overlap 3424891, overlap 3424886 ACGAACATAATAAAA CGGGCCGC AAAT GCGGCCCG TTGGCTTTTATAGGC TERM 4494 3424910 - 3424891 - T 100 -16.4 -4.91285 | opp_overlap 3424891 3424886 ACGAACATAATAAAA CGGGCCGC AAAT GCGGCCCG TTGGCTTTTATAGGC obgE 3426130 - 3424958 - | GTPase ObgE TERM 4495 3425308 - 3425324 + g 71 -7.9 -3.94933 | opp_overlap 3425297, overlap 3425305 3425310 ACCAGCGCGGTTTAG CCGCCAG ATC CTGGCTG TATTTTTCCAGTTCG rhbE 3427111 - 3426146 - | hypothetical protein TERM 4496 3426922 - 3426935 + g 75 -3.7 -4.91852 | opp_overlap 3426903 3426922 GCTTACGAAAAATAC GCAGC GGCG GCAGC TTTCTTTTTACTGCC TERM 4497 3427212 - 3427192 - R 100 -14 -4.75174 | opp_overlap 3427192 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG TERM 4498 3427192 - 3427212 + r 100 -14 -3.794 | opp_overlap 3427192 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG rpmA 3427498 - 3427241 - | 50S ribosomal protein L27 SC3242 3427563 - 3427880 + | hypothetical protein TERM 4499 3428993 - 3428969 - g 76 -9.3 -3.95051 | opp_overlap 3428975, overlap 3428961 GAAGAAGCCGACAAA GCGATATCCGC GTT GCAGATATTGC CGGATACCCCATGGC ispB 3427913 - 3429058 + | octaprenyl diphosphate synthase nlp 3429291 - 3429578 + | DNA-binding transcriptional regulator Nlp TERM 4500 3429620 - 3429591 - T 100 -14.4 -4.08692 | opp_overlap 3429594, overlap 3429594 TAAGTGCCTGTAAAA TAACCCCCGCAA TCGCGT TCGCGGGGGTTA TTCAGCGTACAGAAG TERM 4501 3429594 - 3429617 + T 75 -9.6 -3.63515 | gap 1, opp_overlap 3429591 3429594 GTGCCTGTAAAATAA CCCCCGC-AAT CGC GTTCGCGGGGG TTATTCAGCGTACAG TERM 4502 3429617 - 3429594 - T 95 -11.7 -4.17048 | opp_overlap 3429594, overlap 3429591 GTGCCTGTAAAATAA CCCCCGCAA TCGCGT TCGCGGGGG TTATTCAGCGTACAG murA 3430896 - 3429637 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase yrbA 3431243 - 3430950 - | BolA family transcriptional regulator TERM 4503 3431368 - 3431386 + r 71 -10.3 -2.62192 | opp_overlap 3431334, overlap 3431367 3431363 TCATGCGAAGTGTAG GCCGGAT AAACC ATCCGGC ATTCATTACATACGG yrbB 3431688 - 3431392 - | STAS domain-containing protein TERM 4504 3431472 - 3431488 + g 74 -2.1 -5.12617 | opp_overlap 3431448, overlap 3431473 TAACGCCAGACAGCG ACACGGC ATT GCCCTGC TTTTTTGCCTGGTTC yrbC 3432323 - 3431688 - | ABC transporter ATP-binding protein yrbD 3432893 - 3432342 - | ABC transporter substrate-binding protein yrbE 3433680 - 3432898 - | ABC transporter membrane protein TERM 4505 3432984 - 3432945 - G 70 -10 -3.3164 | gap 1, opp_overlap 3432957 AATCCAGCCCCAGAA CGGCCAACGATGCGTGAAC CAC GGT-ACGCGTCGTTGCCCG GCTAATCCCGGCAGA TERM 4506 3433552 - 3433539 - G 74 -8.1 -4.0162 | opp_overlap 3433543, overlap 3433524 CGCCCACATTATAAA GCTGG CGCA CCAGC AGCGGCGCATGTTTG yrbF 3434500 - 3433688 - | putative ABC transporter ATP-binding protein YrbF TERM 4507 3435213 - 3435238 + G 74 -11.1 -3.24924 | gap 1, overlap 3435213 ACTGGCGGAGCTACC GCGCGAAGGCGG GCT CC-CCGTCGCGC TCTTATGGCTGGGCA TERM 4508 3435453 - 3435415 - g 74 -7.4 -4.07568 | opp_overlap 3435414 3435413, overlap 3435423 GCCGGCGTGCGAAAA GGCGAAAATGATATTGCC GTT GGTAATCTCATTGGCGCC AATATTTTTAATCTC yrbG 3434713 - 3435690 + | putative calcium/sodium:proton antiporter yrbH 3435680 - 3436690 + | D-arabinose 5-phosphate isomerase TERM 4509 3437038 - 3437016 - g 74 -9.8 -3.66844 | opp_overlap 3437021 GGGACAGTCGAATAA GCTGATCGCC TTT AGCGATCTGC TGGAAAAACTGACCA yrbI 3436711 - 3437277 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase yrbK 3437274 - 3437849 + | hypothetical protein TERM 4510 3438253 - 3438239 - gf 73 -5.7 -4.37886 | TTACCGGCGACAAAA TCACC TACCT GGTGA AAGAGCAGAAAATGC TERM 4511 3438354 - 3438340 - gf 76 -3.4 -5.05037 | overlap 3438341 CAAGACAAAAACAAA GGCCAG ACT CCGGCG CAAAAGAAGAGTAAC yhbN 3437797 - 3438372 + | hypothetical protein yhbG 3438379 - 3439104 + | putative ABC transporter ATP-binding protein YhbG TERM 4512 3440156 - 3440146 - g 70 -3.2 -4.83169 | overlap 3440155 AGTGGCTGATAAAAA GCCT TGA AAGC CGCAACGACACGCTG TERM 4513 3440189 - 3440155 - g 76 -10.7 -3.61889 | gap 1, overlap 3440146 3440167 TAAAAAGCCTTGAAA GCCGCAAC-GACACGC TGCT GCGCGTCAGTCGCTGC ATCGTCGAGCAACAG rpoN 3439152 - 3440585 + | RNA polymerase factor sigma-54 yhbH 3440608 - 3440895 + | putative sigma(54) modulation protein TERM 4514 3440923 - 3440949 + F 95 -13 -3.92522 | overlap 3440918 3440924 TTAGCCAGTGCAGGA CGGCCTGTTGTG TGA CACAACGGGCCA TTTGTACAGTTAGCG TERM 4515 3440924 - 3440948 + F 100 -16.5 -2.95192 | overlap 3440918 3440923 TAGCCAGTGCAGGAC GGCCTGTTGTG TGA CACAACGGGCC ATTTGTACAGTTAGC ptsN 3441013 - 3441504 + | sugar-specific enzyme IIA component of PTS yhbJ 3441550 - 3442404 + | hypothetical protein TERM 4516 3442455 - 3442436 - g 70 -9.2 -3.75105 | overlap 3442429 TGAAGTCACCAATAA GCTGGGCA TGCA TGCCCGGC CTGCCATGAAGCTTT ptsO 3442401 - 3442673 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) yrbL 3442922 - 3443554 + | hypothetical protein mtgA 3444357 - 3443629 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 4517 3444276 - 3444239 - G 87 -8.3 -4.58663 | overlap 3444262 ATCACCGCCGAAAAA GGCACCGGAACCACGCT AAAC AGCGCAATGCCGCCGCC CCAAAAGACGGCGAG TERM 4518 3444334 - 3444348 + g 73 -9.2 -3.84246 | opp_overlap 3444329 GCGCAAAAACGTTAA CGGCGC GAT GCGTCG TTTGCTCATTCCGCC yhbL 3445007 - 3444354 - | isoprenoid biosynthesis protein TERM 4519 3445214 - 3445236 + r 100 -7.6 -5.77853 | overlap 3445215 3445217 TGGCGCAGTATTCGC GCACCCCGGT CAA ACCGGGGTCA TTTTTTTTCCGCGTT TERM 4520 3445215 - 3445235 + r 89 -11.1 -4.05085 | overlap 3445214 3445217 GGCGCAGTATTCGCG CACCCCGGT CAA ACCGGGGTC ATTTTTTTTCCGCGT TERM 4521 3445217 - 3445233 + r 93 -13.7 -3.60685 | overlap 3445215 3445214 CGCAGTATTCGCGCA CCCCGGT CAA ACCGGGG TCATTTTTTTTCCGC arcB 3447570 - 3445234 - | aerobic respiration control sensor protein ArcB TERM 4522 3446377 - 3446367 - G 70 -5.4 -4.44974 | TCAAATTCCATAAAA TCTG GCG CAGA CGCGTTCCGTCGGTA yhcC 3448593 - 3447664 - | hypothetical protein TERM 4523 3450441 - 3450429 - g 80 -10.5 -3.86822 | GAAGTGGTCGAGAAA GGCCG CGT CGGCC CAGGCGAGCTGATGG TERM 4524 3451588 - 3451572 - g 74 -10.8 -3.55622 | CTGAATCTCTCCAAA CGCGCC TGGCT GGCGCG CAAACCCATTAGCCC TERM 4525 3452073 - 3452059 - g 71 -11.4 -2.90573 | overlap 3452058 TGATTCAGATTAAAG TCGCGC AGG GCGCGA AACCGGGCGAAGGCG TERM 4526 3452900 - 3452879 - g 83 -10.1 -4.21812 | CTGCACCGAAAATAA CCCGCCGTT TGAT AACGGCGTG CTGAATGCGCAACTG TERM 4527 3453172 - 3453201 + G 75 -12.9 -2.53911 | opp_overlap 3453169 TCGGTAAAGGTATGG CAGGCGGTTTGAT CGCC ATCAGACCGCCGG TAGGTTCCGCCTTCC gltB 3449265 - 3453725 + | glutamate synthase subunit alpha TERM 4528 3454222 - 3454189 - g 84 -13.1 -3.36175 | gap 1, overlap 3454176 AACGGGTAGCGATAA TCGGCGCAGGTCCGGC AGG GCTGG-CGTGCGCCGA CGTGCTGACCCGCAA gltD 3453735 - 3455153 + | glutamate synthase subunit beta TERM 4529 3455160 - 3455200 + F 73 -11 -2.52519 | gap 1, overlap 3455159 3455157 GAAGTGTAACCCTTC CGGCTCCCC-GCTTACTGC CTTG GCTGATGGCTGGGGAGCCG ATATTCCTCTCCTCA TERM 4530 3455695 - 3455661 - g 100 -14.4 -5.03314 | opp_overlap 3455644 3455663 3455667 3455683, overlap 3455662 3455663 3455665 TTTATTTTCAAAAAA TTGAGATTCTCCAGAC AGT GTCTGGAGAATCTCTC CATTTGGCGCAACTG TERM 4531 3455694 - 3455662 - g 100 -17.9 -3.61506 | opp_overlap 3455644 3455663 3455667 3455683, overlap 3455661 3455663 3455665 TTATTTTCAAAAAAT TGAGATTCTCCAGAC AGT GTCTGGAGAATCTCT CCATTTGGCGCAACT TERM 4532 3455663 - 3455693 + G 100 -21.4 -2.64155 | opp_overlap 3455662 3455661 3455663 3455665, overlap 3455644 3455667 3455683 TATTTTCAAAAAATT GAGATTCTCCAGAC AGT GTCTGGAGAATCTC TCCATTTGGCGCAAC TERM 4533 3455693 - 3455663 - g 100 -21.4 -2.76422 | opp_overlap 3455644 3455663 3455667 3455683, overlap 3455662 3455661 3455665 TATTTTCAAAAAATT GAGATTCTCCAGAC AGT GTCTGGAGAATCTC TCCATTTGGCGCAAC TERM 4534 3455691 - 3455665 - g 95 -18.2 -2.92111 | opp_overlap 3455644 3455663 3455667 3455683, overlap 3455663 3455662 3455661 TTTTCAAAAAATTGA GATTCTCCAGAC AGT GTCTGGAGAATC TCTCCATTTGGCGCA TERM 4535 3455667 - 3455689 + G 86 -15 -2.98088 | opp_overlap 3455665 3455663 3455662 3455661, overlap 3455663 3455683 TTCAAAAAATTGAGA TTCTCCAGAC AGT GTCTGGAGAA TCTCTCCATTTGGCG yhcG 3455360 - 3456463 + | hypothetical protein TERM 4536 3457260 - 3457270 + G 91 -6.8 -5.14563 | AGCGCCGTACTGATT GCGA TGG TCGC TTTTTTCCTCGGCAA codB 3456579 - 3457832 + | cytosine permease codA 3457819 - 3459099 + | cytosine deaminase yhcH 3459649 - 3459182 - | hypothetical protein TERM 4537 3459539 - 3459550 + g 71 -7.2 -3.96327 | opp_overlap 3459537 GCCCTGCAATTCATA GCGC CCCG GCGC TTTCTCCTGCGGCCT nanK 3460521 - 3459646 - | N-acetylmannosamine kinase nanE 3461207 - 3460518 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 4538 3460944 - 3460898 - G 91 -14.5 -3.14344 | gap 1, overlap 3460907 GAGCGGTTCCATCAA CGGCGATAATAGCTGCGCCGGC CTGC GCCAGCGCATCTAC-ATCGTCG AGAAAAGGGGTAATG TERM 4539 3460936 - 3460907 - G 95 -14.3 -3.33737 | overlap 3460898 CATCAACGGCGATAA TAGCTGCGCCGGC CTGC GCCAGCGCATCTA CATCGTCGAGAAAAG TERM 4540 3461250 - 3461224 - R 77 -9.4 -3.86346 | overlap 3461226 CTACTCCCTTACAAA TATTGCCCGGTT TAA AACCGGGCAAGC GGATTAACTTTTCGT TERM 4541 3461248 - 3461226 - R 100 -16.4 -3.52113 | overlap 3461224 ACTCCCTTACAAATA TTGCCCGGTT TAA AACCGGGCAA GCGGATTAACTTTTC nanT 3462744 - 3461254 - | putative sialic acid transporter TERM 4542 3461491 - 3461518 + g 70 -9.7 -3.35679 | CGCTCCCAGGATCGG CGCCAGCGCGC CGCCGA GCGCGCCGACG TTATAAGTAAAGCCC TERM 4543 3461921 - 3461895 - G 71 -11.6 -2.92386 | overlap 3461892 3461890 GGAAAGCAAACAGTA CCACCAGCATCA GCA TGACGCCAGTGG GCCAGCGTTTACCGC nanA 3463753 - 3462860 - | N-acetylneuraminate lyase TERM 4544 3463880 - 3463895 + r 79 -3.2 -5.32608 | overlap 3463874 AACCGGGATCGGAGG TGCGAT CGCT ACCGCA TTTTTTGACTTTTTT yhcK 3464679 - 3463888 - | transcriptional regulator NanR TERM 4545 3464762 - 3464787 + r 76 -7.5 -4.25256 | opp_overlap 3464766, overlap 3464766 GAGAGGAGACCAAAC AAAACAGGCCC TTCA GGGCCTGTTGA TTATTTTACTACACG TERM 4546 3464783 - 3464766 - R 100 -12.7 -4.97158 | opp_overlap 3464762 3464766 GGAGACCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA TERM 4547 3464766 - 3464783 + r 93 -12.7 -3.70405 | opp_overlap 3464766, overlap 3464762 GGAGACCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA sspB 3465288 - 3464788 - | ClpXP protease specificity-enhancing factor sspA 3465932 - 3465294 - | stringent starvation protein A SC3281 3466947 - 3466000 - | putative cytoplasmic protein TERM 4548 3467108 - 3467095 - R 100 -9.5 -5.64274 | opp_overlap 3467095 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCTAACAG TERM 4549 3467095 - 3467108 + r 100 -9.5 -5.08824 | opp_overlap 3467095 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCTAACAG rpsI 3467539 - 3467147 - | 30S ribosomal protein S9 rplM 3467983 - 3467555 - | 50S ribosomal protein L13 yhcM 3469410 - 3468286 - | putative ATPase TERM 4550 3469196 - 3469222 + g 81 -6.6 -4.68994 | CACATATACAGCCCG CGAACCGG TATTTGCGCGT CCGGTTCG TTTTTGCCTAATAAT yhcB 3469597 - 3470001 + | cytochrome d ubiquinol oxidase subunit III TERM 4551 3470026 - 3470044 + F 79 -11.7 -3.13082 | opp_overlap 3470024, overlap 3470024 3470022 GTTAAGAAATTTATC GGGCGCA TCGCT TGCGCCC TCTCTCTATCTTTCC TERM 4552 3471382 - 3471356 - g 77 -3.5 -5.02476 | opp_overlap 3471357, overlap 3471357 3471359 ATAGCGTCGAAAAAA GCAGTCCTGCC GCGCA GGCCGGTTTGC AAAAAGATGATGTTA TERM 4553 3471402 - 3471388 - g 83 -7.2 -4.56597 | GCCGGTTTGCAAAAA GATGAT GTT ATCATC GGCGTTAATCGCGAT degQ 3470158 - 3471525 + | serine endoprotease degS 3471618 - 3472688 + | serine endoprotease TERM 4554 3472713 - 3472691 - T 93 -10.6 -4.4078 | opp_overlap 3472675 3472694 GGCGTCGAACTAAAA CGACGCAG CTTTTGC CTGCGTCG TTCGACGGCTAGTCA SC3288 3473453 - 3472722 - | putative inner membrane protein TERM 4555 3472904 - 3472921 + g 70 -7 -4.07568 | GTTGCGCCTGTTGAC GCGCAT ACTGCG ATGCGC TTTTCCAGGCGACCA TERM 4556 3473438 - 3473462 + g 74 -11.4 -3.20991 | CTGTGTCCTCATTTT GCGGGAGCAG AATCA CTGCTCCCGA TTAGATTGGATTACA oadB 3474774 - 3473473 - | putative oxalacetate decarboxylase, subunit beta oadA 3476562 - 3474787 - | pyruvate carboxylase subunit B TERM 4557 3476094 - 3476126 + g 81 -14.1 -2.62184 | opp_overlap 3476093 3476094 GTTGCTCCGTTAAAT CCAGCCAGGTCTGCA GGG TGTGGGCCGGGCTGG TGGTGTAGGAGAGGG oadG 3476820 - 3476578 - | oxaloacetate decarboxylase subunit gamma ttdB 3477594 - 3476977 - | L(+)-tartrate dehydratase subunit beta ttdA 3478493 - 3477594 - | tartrate dehydratase subunit alpha SC3294 3479866 - 3478526 - | putative cation transporter TERM 4558 3479251 - 3479262 + g 78 -5.8 -4.74706 | TGCCGCAGATGAGCA TCGG GAGA CCGA TTTTTGCGTATTCAA SC3295 3480670 - 3480005 - | GntR family transcriptional regulator SC3296 3481286 - 3480657 - | GntR family transcriptional regulator TERM 4559 3481187 - 3481205 + g 75 -5.9 -4.66537 | CCGCAATACTTTCCT GCGCGAG TTCTT CTCCCGC TTTTATATTGCCGGA TERM 4560 3481389 - 3481370 - R 95 -12.8 -3.98913 | overlap 3481382 TTTACAGTCAAAGAA GCCGGAGC AAAA GCCCCGGC ATCGGGCAGGAACAG mdh 3482344 - 3481406 - | malate dehydrogenase TERM 4561 3481574 - 3481560 - G 70 -5.6 -4.38927 | GGCTGAGAGAAGAAA CGGGCA TAC TGACCG TCGCCTTCCACATAG TERM 4562 3481912 - 3481922 + g 75 -4 -4.95155 | opp_overlap 3481896 CCAGCGTGGTAACGC CAAA CAG TTTG TTTTTGTCGTATACG argR 3482759 - 3483229 + | arginine repressor TERM 4563 3483234 - 3483264 + F 78 -6 -4.85599 | overlap 3483235 3483236 AAGAGCTTTAGTCCC ACTTCCTCCGTCGT CGT ACGGCGGAGGCACC TTTTTGTCCCCTCCC TERM 4564 3483235 - 3483263 + F 75 -9.5 -3.50877 | overlap 3483234 3483236 AGAGCTTTAGTCCCA CTTCCTCCGTCGT CGT ACGGCGGAGGCAC CTTTTTGTCCCCTCC TERM 4565 3483236 - 3483262 + F 81 -13 -2.70044 | overlap 3483235 3483234 GAGCTTTAGTCCCAC TTCCTCCGTCGT CGT ACGGCGGAGGCA CCTTTTTGTCCCCTC TERM 4566 3483468 - 3483458 - f 79 -2.6 -5.27923 | opp_overlap 3483458, overlap 3483463 TAACGTTATAAAAAA TAAA ATT TTTA ATGTCTTTAAAAAGC TERM 4567 3483481 - 3483463 - f 85 -3.3 -5.49579 | opp_overlap 3483458, overlap 3483458 TTATAAAAAATAAAA TTTTTAA TGTCT TTAAAAA GCAGAAACAATTAGC yhcN 3483594 - 3483857 + | putative outer membrane protein SC3300 3483961 - 3484227 + | putative periplasmic protein TERM 4568 3484254 - 3484272 + T 100 -13.1 -5.47914 | CTAACCCGACGACTT GCCCCCG CCTGC CGGGGGC TTTTTTATGCTTTTT yhcO 3484559 - 3484287 - | hypothetical protein TERM 4569 3484503 - 3484516 + g 74 -6.7 -4.3623 | opp_overlap 3484515 CGTCTGCGTAAACTC GCGAT AAAA ATCGC TTTGGTTTTTAATAT TERM 4570 3484579 - 3484592 + r 72 -6.7 -4.30576 | overlap 3484577 AGCCACCATCCCCGA CAGAC AATT GTCTG TTTTACTACTAAGCA TERM 4571 3484649 - 3484666 + r 74 -3.3 -5.03994 | AAACGCTTTTAGCCC CGGAGCA CTCT TGCGCTG TTTTTGTATCTCAAA TERM 4572 3484720 - 3484702 - R 100 -8.1 -5.65177 | opp_overlap 3484702 ATAGTCATAAAAAAA CCGACGC TTTTG GCATCGG TTCTTGTGGGTTAGC yhcP 3486698 - 3484731 - | p-hydroxybenzoic acid efflux subunit AaeB yhcQ 3487636 - 3486704 - | p-hydroxybenzoic acid efflux subunit AaeA TERM 4573 3487283 - 3487324 + g 72 -3.5 -4.72272 | gap 1, overlap 3487284 3487311 CTCTTCCCGGGACAT CGCCTGTACGCCGAGGCG ATTACGG CGAC-CGGCTTCCTGGCG TTTTTCCTGCGCCAG TERM 4574 3487524 - 3487512 - G 86 -10.5 -4.08394 | ACATCGGCGCTAAAA CGCGC GTC GCGCG TCCAGGGAGATTCGG yhcR 3487847 - 3487644 - | hypothetical protein yhcS 3488029 - 3488958 + | putative DNA-binding transcriptional regulator tldD 3490628 - 3489081 - | protease TldD TERM 4575 3489905 - 3489938 + g 70 -8.7 -3.69332 | gap 1, opp_overlap 3489906, overlap 3489906 AATACTCATAACCAA AGCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGCG TTTACCGTCTTCTTC TERM 4576 3489937 - 3489906 - G 90 -12.2 -4.0127 | gap 1, opp_overlap 3489906 3489905 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4577 3489906 - 3489937 + g 72 -12.2 -2.80876 | gap 1, opp_overlap 3489906, overlap 3489905 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4578 3490182 - 3490198 + g 74 -4.4 -4.75776 | gap 1 GTAGAGCGGCTGATG CGCTACG GCGG CG-AGCG TTTTTACCTTGCCTT yhdP 3494471 - 3490671 - | hypothetical protein cafA 3496051 - 3494582 - | ribonuclease G TERM 4579 3494794 - 3494805 + g 75 -5.8 -4.62069 | opp_overlap 3494792 3494794 TGATCTCATAGCAGA CGGT TTCC ACCG TTTTTACCGTCCCGC TERM 4580 3495408 - 3495387 - G 71 -10.1 -3.55444 | TGCGCATCGGCGAAA TCGCGCAGC ACGC GCTGCGCCA GCGCCAGTTCGCCAT TERM 4581 3495436 - 3495449 + g 71 -4.5 -4.62783 | CATACATCTGGTAGC GCGTT TGCG GACGC TTTTTGCGCTCCATG maf 3496634 - 3496041 - | Maf-like protein TERM 4582 3496375 - 3496389 + g 70 -7 -4.08216 | overlap 3496376 ATTTCTGCGGCATGA GCGGCG TCG CGCGGC TTTTCCAGCACCTCG mreD 3497134 - 3496643 - | rod shape-determining protein MreD mreC 3498186 - 3497134 - | cell wall structural complex MreBCD transmembrane component MreC TERM 4583 3497863 - 3497892 + g 71 -7.7 -3.96148 | overlap 3497871 ACGCAGCGGCGACCC CAGCAGCTCGCGC AACC GCGCGTTCTCCTG TTTGTACTGCCCCAG TERM 4584 3497871 - 3497884 + g 71 -9.5 -3.59024 | overlap 3497863 GCGACCCCAGCAGCT CGCGC AACC GCGCG TTCTCCTGTTTGTAC TERM 4585 3497911 - 3497923 + g 80 -4.8 -5.03715 | overlap 3497921 GTACTGCCCCAGCAT CAGC AGGTC GCTG TTTTTTAGCAGTAAT TERM 4586 3497940 - 3497956 + g 80 -9.3 -4.11216 | opp_overlap 3497939 3497938 TTTTTAGCAGTAATT CCTGGCG CAG CGCCCGG TTTTCCAGCTCAAGC mreB 3499369 - 3498251 - | rod shape-determining protein mreB yhdA 3501542 - 3499602 - | regulatory protein CsrD TERM 4587 3499768 - 3499745 - G 74 -10.2 -3.53012 | CGCCCGTCGCGTAAA CCTGCGTAGG CGTG CCCGCGCAGG CCTCTACCAGACTTT TERM 4588 3499787 - 3499797 + g 74 -6.8 -4.29845 | CTACCAGACTTTGAA CCAG AAG CTGG TTTTCCGTTCGCTTC TERM 4589 3502116 - 3502128 + G 70 -6.9 -4.08945 | overlap 3502117 3502123 GTAACGCCATGATCA TCGGC ACC GCCGG TTTTACCGCCATGCT yhdH 3501746 - 3502720 + | putative oxidoreductase TERM 4590 3502871 - 3502881 + G 87 -2.4 -5.60993 | GAAGCCGATGTGACT GCGG AAT CGGC TTTTTTTATGCAGCG TERM 4591 3503133 - 3503123 - g 71 -8.2 -3.85698 | overlap 3503124 TTTGGCCTTGATAAA GCCG ACC CGGC GGCCAATGCCGGAAG yedY 3502832 - 3503836 + | putative sulfite oxidase subunit YedY yedZ 3503837 - 3504436 + | putative sulfite oxidase subunit YedZ accB 3504829 - 3505299 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 4592 3505642 - 3505628 - g 71 -10 -3.53811 | TTTATCGGCCCGAAA GCGGAT ACC ATCCGC CTGATGGGCGATAAA TERM 4593 3505721 - 3505685 - g 91 -7.1 -5.14965 | ACCGCGATGAAAAAA GCGGGCGTTCCGACCGT ACC AGGATCTGACGGCCCGC TGGGCGACGATATGA TERM 4594 3505810 - 3505787 - g 73 -9.4 -3.78775 | opp_overlap 3505807 3505808 CCGGTGATCATCAAA GCGTCCGGCG GCGG CGGCGGCCGC GGTATGCGCGTGGTT accC 3505310 - 3506659 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 4595 3506679 - 3506695 + F 100 -10.8 -5.72622 | opp_overlap 3506679 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG TERM 4596 3506695 - 3506679 - f 87 -10.8 -4.19506 | opp_overlap 3506679 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG yhdT 3506768 - 3507010 + | hypothetical protein TERM 4597 3507079 - 3507091 + G 76 -3.3 -5.0133 | overlap 3507073 ACGCTATGCGCAAGC GTACC GCC GGCAC TTTTTTAAACGAATA TERM 4598 3507823 - 3507843 + G 73 -6.1 -4.4261 | ACCGGGGCATTATTA TCGGTACGA TTG TCGTGGCGA TTTTAATGTTCGGGA panF 3507000 - 3508451 + | sodium/panthothenate symporter TERM 4599 3508525 - 3508555 + G 77 -11.2 -3.57144 | opp_overlap 3508535, overlap 3508530 AGAGCTGAGTGATGC GCTGATGGAAGCGG GCG CCGTTTCCATTACC TTTCAGGATACGCAC TERM 4600 3508530 - 3508550 + G 78 -11.9 -3.28001 | opp_overlap 3508535, overlap 3508525 TGAGTGATGCGCTGA TGGAAGCGG GCG CCGTTTCCA TTACCTTTCAGGATA prmA 3508463 - 3509344 + | ribosomal protein L11 methyltransferase TERM 4601 3509354 - 3509373 + F 91 -11.4 -4.36914 | AAATAATTCTTGTCA GCGTGGTC GCCC GGCCACGC TTTTCTCCACACAAC TERM 4602 3509649 - 3509636 - f 84 -8.1 -4.70583 | TTCATGAACACAAAA GCGCA TCTG TGCGC CCCCTTCCGACTGGC TERM 4603 3509769 - 3509756 - f 86 -4.5 -5.626 | opp_overlap 3509732 3509756, overlap 3509743 TAGCTTATAAAAAAA GCAGA TTAT TCCGC TTATCTTGTTTCTGG TERM 4604 3509971 - 3509957 - f 76 -4.2 -5.00884 | overlap 3509958 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG TERM 4605 3510876 - 3510851 - g 70 -9.8 -3.34894 | gap 1, overlap 3510849 AATCGCGCGTAAACA CGT-CTCCTGG TATCT CCAGGAGCACG CTCCAGACGACCAGT yhdG 3510006 - 3510971 + | tRNA-dihydrouridine synthase B fis 3510997 - 3511293 + | DNA-binding protein Fis TERM 4606 3511348 - 3511323 - f 74 -6 -4.56597 | opp_overlap 3511323 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATC TERM 4607 3511323 - 3511348 + F 100 -8.2 -5.252 | opp_overlap 3511323 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATC TERM 4608 3511547 - 3511557 + G 75 -6.8 -4.40358 | ATGGTGGAATCCTGG GACG AAG CGTC TTTTCTGGCCTGGCT yhdJ 3511373 - 3512263 + | putative methyltransferase yhdU 3512319 - 3512510 + | putative periplasmic protein TERM 4609 3514107 - 3514140 + T 85 -12.5 -3.43492 | GGCGTACTGAATCCT GACCAGTTTTTACCG CTGG CGGAAAAAACGGGTC TTATCGTCACTATCG envR 3515425 - 3514763 - | DNA-binding transcriptional regulator EnvR SC3327 3515498 - 3515656 + | hypothetical protein TERM 4610 3516085 - 3516075 - f 74 -5.4 -4.64861 | CGTGCTTAAAAGAAA CTTC ACC GAAG GTAGCGATGTAGAGG TERM 4611 3516310 - 3516323 + F 70 -9.5 -3.01712 | opp_overlap 3516319 GATGCCGCCGTTGTG GCGGC AAAA GCCGC TGTTGAAAGCGCGCG TERM 4612 3517946 - 3517976 + G 70 -6.8 -4.1021 | overlap 3517936 3517949 AAACTGGCGGAACTG CAGCCTTTCTTCCC CCA GGGAATGAAGGTGG TTTATCCTTATGACA acrF 3517007 - 3520120 + | multidrug transporter acriflavin resistance protein F TERM 4613 3520148 - 3520133 - Tf 77 -10.4 -3.32233 | opp_overlap 3520133, overlap 3520131 3520129 TAACCAGTAAACAGA GGCGTC TTCG GACGCC TTTTAAACGGTACGT TERM 4614 3520133 - 3520148 + TF 87 -10.4 -4.09864 | opp_overlap 3520133 3520131 3520129 TAACCAGTAAACAGA GGCGTC TTCG GACGCC TTTTAAACGGTACGT SC3329 3520380 - 3520216 - | hypothetical protein yhdV 3520356 - 3520577 + | putative outer membrane lipoprotein TERM 4615 3520608 - 3520582 - fH 80 -12.2 -3.05769 | opp_overlap 3520587, overlap 3520575 TTTCTAAATGATACA TGCAGGCGCGGC AAT GCCGCGCTTTCA GTAATAATATAAAGG TERM 4616 3520587 - 3520603 + FH 100 -15.1 -3.6959 | opp_overlap 3520582 3520575 AAATGATACATGCAG GCGCGGC AAT GCCGCGC TTTCAGTAATAATAT TERM 4617 3520935 - 3520921 - fH 71 -3.5 -4.88405 | AACTGGCAAATAAAA TAGCC TAATG GGCCA GATTTTTAGTCCTCA TERM 4618 3521148 - 3521182 + FH 100 -12.3 -4.55209 | gap 1, opp_overlap 3521155, overlap 3521155 CATAGAGAGATAAAT GCAAAAAGGCCCAATC TTTC GATTGGGCCC-TTTGC TTTATTTGATGTCTG TERM 4619 3521176 - 3521155 - fH 100 -14.5 -4.85433 | opp_overlap 3521148 3521155 AGATAAATGCAAAAA GGCCCAATC TTTC GATTGGGCC CTTTGCTTTATTTGA TERM 4620 3521155 - 3521176 + FH 90 -14.5 -3.15242 | opp_overlap 3521155, overlap 3521148 AGATAAATGCAAAAA GGCCCAATC TTTC GATTGGGCC CTTTGCTTTATTTGA TERM 4621 3524058 - 3524070 + FH 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4622 3524610 - 3524634 + FH 71 -8 -3.93061 | gap 1, opp_overlap 3524608 3524616, overlap 3524612 3524613 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 4623 3524709 - 3524674 - fH 77 -9.2 -4.00532 | opp_overlap 3524685 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA CTGATGGCAACGCCT TERM 4624 3526630 - 3526642 + G 71 -7.7 -4.00532 | overlap 3526618 CACCGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4625 3526662 - 3526676 + G 80 -4.2 -5.0916 | opp_overlap 3526662, overlap 3526651 3526663 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTCTCTTGAACC SC3334 3526627 - 3526749 + | hypothetical protein TERM 4626 3527406 - 3527368 - g 77 -8 -4.08767 | GGCAGTCCGGTAAAA CAGATCCGCCCCCTGAGC GAT GCTGAGAGATCGGGCCTG CAGTACTCCGCCAAT yrdA 3526924 - 3527478 + | putative ferripyochelin binding protein yrdB 3527711 - 3527454 - | hypothetical protein aroE 3528526 - 3527708 - | shikimate 5-dehydrogenase yrdC 3529133 - 3528531 - | putative ribosome maturation factor TERM 4627 3528686 - 3528703 + gr 74 -11.3 -2.75963 | opp_overlap 3528701, overlap 3528685 ATCCGCTCAGATTGG CGCTGGT GGAA ACCAGCG GTTTGCCATACGCAT yrdD 3529650 - 3529108 - | hypothetical protein TERM 4628 3529158 - 3529172 + gr 77 -3.4 -5.10933 | opp_overlap 3529153, overlap 3529159 TGGCGCAAAAGCGCT TCACGC CCT GCGCGG TTTTCTTTTCGATGA TERM 4629 3529589 - 3529615 + gr 71 -4.2 -4.56597 | overlap 3529592 3529604 GAACGAATTACCAGT TCGGCCCCGCAC TGC GGGCAGGGCTCA TTTTTACGCACCGAA smg 3530150 - 3529677 - | hypothetical protein smf 3531246 - 3530122 - | hypothetical protein def 3531378 - 3531887 + | peptide deformylase TERM 4630 3532134 - 3532124 - g 74 -6.8 -4.25104 | TCGTCCTCAGGAAAA CCAG CAT CTGG TGGCTGACTTACATG fmt 3531903 - 3532850 + | methionyl-tRNA formyltransferase TERM 4631 3532867 - 3532885 + F 100 -10.2 -5.54907 | overlap 3532868 GATCACGTCTTTATA CGCCCGGT GTT ACCGGGCA TTTTTATTTTATACA TERM 4632 3532868 - 3532884 + F 100 -13.7 -3.91317 | overlap 3532867 ATCACGTCTTTATAC GCCCGGT GTT ACCGGGC ATTTTTATTTTATAC TERM 4633 3533602 - 3533619 + G 91 -7.7 -4.88736 | CTGTCCAGGATGCCT CTGCGCA GGGA TGTGCAG TTTTTCTCGCTCCTC sun 3532902 - 3534191 + | 16S rRNA methyltransferase B TERM 4634 3535435 - 3535422 - g 72 -2.3 -4.9448 | overlap 3535423 ATTGACGAAATAAAA CTGCC GCCA GGCAC CATTATTGGCGCGGT trkA 3534213 - 3535589 + | potassium transporter peripheral membrane component TERM 4635 3535596 - 3535614 + F 100 -11.7 -4.47271 | opp_overlap 3535595 TTCCTCTAATTTAAG GGGCGCT CATTC AGCGCCC TTTTAATTCCCTTTA TERM 4636 3536073 - 3536048 - g 74 -2.5 -5.09426 | gap 1, overlap 3536054 CTCAACCGTAAAAAA GCAGA-AGAGCC GGC AGCTCCACCCGC ACCTTCTAAAGAGGA mscL 3535730 - 3536143 + | large-conductance mechanosensitive channel TERM 4637 3536199 - 3536147 - T 93 -13.6 -3.61894 | overlap 3536150 3536153 AACCGTTCTTAATAA GCAGAAGGCCAGTGGTAAAAAAGT CACTT ACTTTCTTGCCACTGGCCTCCCAG TTCCCCCGGTTACCA TERM 4638 3536196 - 3536150 - T 100 -19.7 -2.93073 | overlap 3536147 3536153 CGTTCTTAATAAGCA GAAGGCCAGTGGTAAAAAAGT CACTT ACTTTCTTGCCACTGGCCTCC CAGTTCCCCCGGTTA TERM 4639 3536193 - 3536153 - T 100 -17.8 -3.61089 | overlap 3536150 3536147 TCTTAATAAGCAGAA GGCCAGTGGTAAAAAAGT CACTT ACTTTCTTGCCACTGGCC TCCCAGTTCCCCCGG zntR 3536831 - 3536406 - | zinc-responsive transcriptional regulator yhdN 3537210 - 3536842 - | hypothetical protein TERM 4640 3537274 - 3537307 + r 79 -11.9 -3.16921 | opp_overlap 3537276 3537284, overlap 3537284 TGGGGTTCAGGAGGA TATAAAAAAACCCGC CGAA GCGGGTTTTTTTACG TTACTACAGATTACT TERM 4641 3537305 - 3537276 - R 100 -16.7 -2.82516 | opp_overlap 3537274 3537284, overlap 3537284 GGGTTCAGGAGGATA TAAAAAAACCCGC CGAA GCGGGTTTTTTTA CGTTACTACAGATTA TERM 4642 3537297 - 3537284 - R 100 -9.5 -5.74122 | opp_overlap 3537284 3537274, overlap 3537276 GAGGATATAAAAAAA CCCGC CGAA GCGGG TTTTTTTACGTTACT TERM 4643 3537284 - 3537297 + r 100 -9.5 -5.54192 | opp_overlap 3537276 3537284, overlap 3537274 GAGGATATAAAAAAA CCCGC CGAA GCGGG TTTTTTTACGTTACT rplQ 3537701 - 3537318 - | 50S ribosomal protein L17 rpoA 3538731 - 3537742 - | DNA-directed RNA polymerase subunit alpha TERM 4644 3537825 - 3537837 + g 76 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC GGTAA GAGA TTTTTTACCCAGGTT TERM 4645 3538772 - 3538754 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3539377 - 3538757 - | 30S ribosomal protein S4 TERM 4646 3538867 - 3538877 + g 70 -6.8 -4.12188 | overlap 3538864 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 4647 3539404 - 3539422 + r 76 -4.4 -5.00616 | opp_overlap 3539404 3539408 AACTAACCTGGAAAA CGAAGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3539800 - 3539411 - | 30S ribosomal protein S11 TERM 4648 3539998 - 3540016 + r 86 -8.8 -4.44667 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTTCTTCAGACA TERM 4649 3540292 - 3540263 - R 100 -12.3 -4.6645 | gap 1 TACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA rpmJ 3540438 - 3540322 - | 50S ribosomal protein L36 secY 3541801 - 3540470 - | preprotein translocase subunit SecY TERM 4650 3541368 - 3541337 - G 80 -10.2 -3.81755 | overlap 3541343 AGCGGTGAAATAGAA TGCAAAGCCTGG ATTCATCA CCAGGCCCTGCA TACCAGGCATATTCG rplO 3542243 - 3541809 - | 50S ribosomal protein L15 TERM 4651 3542189 - 3542202 + g 73 -5.2 -4.59853 | opp_overlap 3542182, overlap 3542182 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3542426 - 3542247 - | 50S ribosomal protein L30 rpsE 3542933 - 3542430 - | 30S ribosomal protein S5 rplR 3543301 - 3542948 - | 50S ribosomal protein L18 rplF 3543844 - 3543311 - | 50S ribosomal protein L6 rpsH 3544249 - 3543857 - | 30S ribosomal protein S8 rpsN 3544588 - 3544283 - | 30S ribosomal protein S14 rplE 3545142 - 3544603 - | 50S ribosomal protein L5 TERM 4652 3544980 - 3544998 + g 71 -6 -4.30987 | TTGCTGTCAGGTCTG CTGCTG CGTTATC CAGCAG TTTCTTGTCAGCGAT rplX 3545471 - 3545157 - | 50S ribosomal protein L24 rplN 3545853 - 3545482 - | 50S ribosomal protein L14 TERM 4653 3545925 - 3545913 - R 81 -3.3 -5.40474 | AGGTCGTTAAAAAAA CCCCA TAT CGAGG GCGCGGCATTATAAC TERM 4654 3545994 - 3545969 - R 100 -12.7 -5.252 | opp_overlap 3545969 3545973 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGCG TERM 4655 3545969 - 3545994 + r 77 -10.5 -3.34895 | opp_overlap 3545969, overlap 3545973 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGCG TERM 4656 3545973 - 3545990 + r 74 -6.9 -4.3255 | opp_overlap 3545969, overlap 3545969 GGTAGAAAAAATAAA CGGCCCA TCGC TGAGCCG TTTATTCGTTGAGAA rpsQ 3546271 - 3546017 - | 30S ribosomal protein S17 rpmC 3546462 - 3546271 - | 50S ribosomal protein L29 rplP 3546872 - 3546462 - | 50S ribosomal protein L16 rpsC 3547586 - 3546885 - | 30S ribosomal protein S3 TERM 4657 3546914 - 3546929 + gH 70 -3.2 -4.70626 | overlap 3546915 3546926 TACGCTGCTGCTTTT TCGGTT GAGC AGCCGG TTTTTCCGGTTGTTC SC3369 3547586 - 3547993 + | hypothetical protein rpsS 3548229 - 3547951 - | 30S ribosomal protein S19 rplB 3549067 - 3548246 - | 50S ribosomal protein L2 TERM 4658 3549103 - 3549123 + r 75 -9.7 -3.57462 | opp_overlap 3549106, overlap 3549106 CTCAGCGCCGCCGAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3549387 - 3549085 - | 50S ribosomal protein L23 rplD 3549989 - 3549384 - | 50S ribosomal protein L4 TERM 4659 3549957 - 3549969 + g 73 -10.5 -3.42663 | opp_overlap 3549952, overlap 3549956 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3550629 - 3550000 - | 50S ribosomal protein L3 TERM 4660 3550591 - 3550605 + g 82 -5.6 -5.02074 | opp_overlap 3550572 3550590, overlap 3550593 ATCTTCAGTGAAGAT GCGGGT CAT ACCCAC TTTTTTACCGACTAA rpsJ 3550973 - 3550662 - | 30S ribosomal protein S10 TERM 4661 3551229 - 3551255 + G 72 -2.1 -4.86731 | AGCATGATTCCAGAT GGTACGCATGG GATGG CAACGCGCACC TTTTCTTTGGAAGGC TERM 4662 3551426 - 3551445 + G 70 -9.2 -3.72588 | TATACGACGCGCGTA CCGGTCTG CTGC CTGACCGG TTTACCTGTCCATTA hopD 3551227 - 3551820 + | leader peptidase HopD bfr 3552293 - 3551817 - | bacterioferritin, iron storage and detoxification protein TERM 4663 3552367 - 3552357 - R 89 -5.4 -5.78622 | GGATGTCAAAAAAAA GAGT GTG ACTC AGGCGATCTCTTTAA bfd 3552560 - 3552366 - | bacterioferritin-associated ferredoxin TERM 4664 3552700 - 3552715 + r 79 -11.8 -3.14878 | opp_overlap 3552700, overlap 3552698 AGCAGGCAACAAAAA GGGCGC CGAA GCGCCC TCTTCAATTCAAAAC TERM 4665 3552715 - 3552700 - R 100 -11.8 -5.11063 | opp_overlap 3552700 3552698 AGCAGGCAACAAAAA GGGCGC CGAA GCGCCC TCTTCAATTCAAAAC tuf 3553929 - 3552745 - | elongation factor Tu TERM 4666 3553974 - 3553949 - R 82 -13.3 -2.78935 | opp_overlap 3553947 ATATTCCTTACTATA GCGCTCTCCCC TTCA GGAGAGAGCAC GGGATTTTGGTTTTT fusA 3556115 - 3554001 - | elongation factor G TERM 4667 3556186 - 3556163 - R 83 -8.9 -4.21275 | gap 1 TTAAGTTATCCAAAA CGGGCGACTT ACCTG AAG-CGCCCG CCTGGTGACTATGAC rpsG 3556682 - 3556212 - | 30S ribosomal protein S7 rpsL 3557152 - 3556778 - | 30S ribosomal protein S12 TERM 4668 3557222 - 3557200 - R 93 -10.6 -4.7268 | AAACACGTAATAAAA CGCCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG yheL 3557565 - 3557278 - | tRNA 2-thiouridine synthesizing protein B yheM 3557929 - 3557573 - | hypothetical protein TERM 4669 3557758 - 3557773 + g 75 -4 -4.93296 | gap 1 CAATATAGTCACGCG CCAGCAC AGC GT-CTGG TTTTTGTCCTGGTAA TERM 4670 3557849 - 3557819 - G 100 -9.8 -5.24129 | gap 1, opp_overlap 3557820 GTCGCTGATAAAAAA GACGCCCAGCGCT TCCGTT AGCGCT-GACGTC GCCAGCAGCGCATCC yheN 3558315 - 3557929 - | hypothetical protein TERM 4671 3558004 - 3558044 + g 86 -12 -3.77196 | TAGCGTAAAGCCCGG CTGAAGATTGGCGGAC-GGC AAC GCCAGTCTGCCGG-CTTCAG TTTCATCAATAATAC yheO 3559049 - 3558315 - | hypothetical protein TERM 4672 3558832 - 3558863 + g 70 -6.7 -4.21194 | gap 1 ATTTTACGGCCCGTA TGTTC-GCCATTGG CAATA CGAATGGCTGAACA TTTTAGATCCTGCAA TERM 4673 3559062 - 3559049 - R 78 -6.7 -4.59226 | opp_overlap 3559059 3559060 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTATGTTT TERM 4674 3559303 - 3559282 - R 100 -13 -6.09888 | opp_overlap 3559279 CCTGAATAAAAAAAA CCGCCGCT ATTACA AGCGGCGG CTCTCAGTTTTTATT fkpA 3560132 - 3559314 - | FKBP-type peptidyl-prolyl cis-trans isomerase slyX 3560352 - 3560570 + | hypothetical protein TERM 4675 3560585 - 3560599 + T 100 -8.5 -5.60993 | opp_overlap 3560585 AGACGAAAAAAAAAA GCGGG GTTAA CCCGC TTTTTTTGTGCCCGA TERM 4676 3560599 - 3560585 - T 100 -8.5 -6.43839 | opp_overlap 3560585 AGACGAAAAAAAAAA GCGGG GTTAA CCCGC TTTTTTTGTGCCCGA slyD 3561355 - 3560765 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4677 3561329 - 3561340 + g 73 -5.8 -4.39989 | overlap 3561313 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT yheV 3561650 - 3561450 - | hypothetical protein kefB 3563465 - 3561660 - | glutathione-regulated potassium-efflux system protein KefB TERM 4678 3562248 - 3562237 - G 77 -7.2 -4.2717 | ATCACCTGACCAAAA CGGC CAAA GCCG ACGACAATTACCTGG yheR 3564016 - 3563465 - | glutathione-regulated potassium-efflux system ancillary protein KefG TERM 4679 3565799 - 3565783 - g 80 -5.1 -4.91109 | overlap 3565784 GGTTCACGACAAAAA GGTCGAA CCG TTCGACG GCGACCTGGAAGATT yheS 3564272 - 3566179 + | putative ABC transporter ATP-binding protein mauR 3566342 - 3566563 + | ABC transporter ATPase TERM 4680 3566566 - 3566586 + T 78 -6.1 -4.72007 | overlap 3566569 CTGCGTTATGTGATT TAGCGGCAA AGG TTGCCGTGA TTTATTTTCGTCAGC TERM 4681 3566569 - 3566583 + T 71 -10 -3.27205 | overlap 3566566 CGTTATGTGATTTAG CGGCAA AGG TTGCCG TGATTTATTTTCGTC ydhR 3566876 - 3566565 - | hypothetical protein TERM 4682 3566722 - 3566733 + g 83 -5.8 -4.95896 | AACAAGTAAATGCCG CCAG CTTG CTGG TTTTTCTCGCTTTCT yheT 3567064 - 3568140 + | putative hydrolase TERM 4683 3568275 - 3568251 - g 76 -2.7 -5.06414 | overlap 3568253 3568266 TCGCTTGAACAAAAA GTCGCTGACGT AAA ACGCCAACTGC AATCCGGCGAGGCCG yheU 3568137 - 3568355 + | hypothetical protein prkB 3568407 - 3569276 + | putative phosphoribulokinase yhfA 3569776 - 3569372 - | hypothetical protein crp 3570084 - 3570716 + | cAMP-regulatory protein TERM 4684 3570728 - 3570749 + F 95 -8 -5.30616 | opp_overlap 3570728, overlap 3570720 3570718 TTAATCCCGTCAGAA TGGCGCGT TTTATC ATGCGCCA TTTTTGTTTGCATCG TERM 4685 3571553 - 3571611 + G 88 -11.6 -4.12254 | opp_overlap 3571553 3571576, overlap 3571554 3571594 CAGCCATGCGGAAGA GGTGATTCGCTGGAATGCGCAAACGGTC GCC GCCCGTCTGCGCGTGCTGGCGGATGACA TTCTTTATCATCGTC TERM 4686 3571554 - 3571610 + G 91 -15.1 -3.0663 | opp_overlap 3571553 3571576, overlap 3571553 3571594 AGCCATGCGGAAGAG GTGATTCGCTGGAATGCGCAAACGGTC GCC GCCCGTCTGCGCGTGCTGGCGGATGAC ATTCTTTATCATCGT TERM 4687 3571685 - 3571653 - g 95 -10.6 -4.65895 | overlap 3571655 TTCTCCATGGAAAAA CAGATTGGCGCTCT GGAGA AGATCGCCAATCAG CATCCTGAAAATCCG TERM 4688 3571683 - 3571655 - g 90 -11.8 -3.94812 | overlap 3571653 CTCCATGGAAAAACA GATTGGCGCTCT GGAGA AGATCGCCAATC AGCATCCTGAAAATC yhfK 3570753 - 3572852 + | putative inner membrane protein TERM 4689 3572891 - 3572855 - T 77 -11.5 -3.16437 | overlap 3572848 3572847 TACAAAAGGTTAAGA CCGACTGCCGGATGCGC TAC GCTTATCCGGCAATCCG CCATCAGGCCACCAC argD 3574112 - 3572895 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein pabA 3574761 - 3574198 - | para-aminobenzoate synthase component II TERM 4690 3574526 - 3574499 - G 75 -12 -2.85699 | overlap 3574498 ACCGACGCACCAAAG GCCTGCGCCATC GCCT GATGACCCAGGC AAACGCCCAGCATCG TERM 4691 3574574 - 3574559 - G 71 -10.4 -3.29263 | overlap 3574547 ATACGTCCGGCATAA TGGCGG ATGA CCGCCA GTGAAATGCCAGCGT TERM 4692 3574675 - 3574640 - G 71 -9.9 -3.53012 | opp_overlap 3574649 TTTTGCGGGTTCAAA GCGTCAATG-TGCGCCA GCGT TAGCGCATCATTG-CGC CGGACCTGCACTTCC fic 3575395 - 3574793 - | cell filamentation protein Fic TERM 4693 3574853 - 3574834 - G 71 -4.2 -4.56597 | gap 1, opp_overlap 3574845, overlap 3574845 TCGCTTTCTGAAAAA TCGC-CCGC AAA GCGGAGAGA TCGCCCATCGCGCCG TERM 4694 3575092 - 3575104 + g 70 -3.3 -4.70659 | CCAGATCCTGCATCA GAGCG TTG CCCTC TTTTTCGATATAGGC TERM 4695 3575650 - 3575630 - R 100 -11.8 -4.46155 | GAGACAGGGAGAAAA CGCGGGCG GCTCG CACCCGCG CAGGCATGTTTTATG ppiA 3576233 - 3575661 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 4696 3576214 - 3576200 - G 77 -7.8 -4.33907 | opp_overlap 3576213 CAGAAAGAGCGAAAA CAGCTG CGA CAGCCG CCAGAGTCGATTTGA TERM 4697 3576760 - 3576800 + G 71 -8.2 -3.78934 | gap 1, overlap 3576761 3576799 GTTTTATCCTGATGG TGCT-GGCGGTGGCCGGGC TGAT GTTCGGCCATAGCCTGGCG TTGTTCTCAGCGGCG yhfC 3576510 - 3577691 + | hypothetical protein TERM 4698 3577698 - 3577727 + TF 82 -13.5 -2.88861 | opp_overlap 3577696 3577695 ACGCATTGATAATCC TTGCCGGATGGCG ACGT CGCCCTCCGGCAC TCTATCCCCCTCCTG SC3407 3578000 - 3577824 - | hypothetical protein TERM 4699 3578711 - 3578742 + GH 71 -10.8 -2.71011 | gap 1 GCTGGCTACCCAGTG CGGTCTGGCCGTCGC GCA GCG-CGGCGGGATCG TGATTAACGACACCT TERM 4700 3579263 - 3579249 - gH 79 -10 -3.74693 | TTCGATGTGACTAAA GGCGAT CTG ATCGCC GCTATCAATAAAGGC TERM 4701 3579326 - 3579315 - gH 74 -7.2 -4.08919 | overlap 3579310 AAAGCGGAAACCAAA GCCG GAAC CGGC TGCGGCGGCTGCATC nirB 3577953 - 3580496 + | nitrite reductase, large subunit nirD 3580493 - 3580819 + | nitrite reductase small subunit TERM 4702 3580827 - 3580847 + F 100 -12.5 -5.07053 | overlap 3580828 GCGGTTAATTATTTT TGGGAGGCG CAA CGCCTCCCC TTTTTTGACGTACTT TERM 4703 3580828 - 3580846 + F 100 -16 -3.63148 | overlap 3580827 CGGTTAATTATTTTT GGGAGGCG CAA CGCCTCCC CTTTTTTGACGTACT nirC 3581003 - 3581812 + | nitrite transporter NirC cysG 3581824 - 3583197 + | siroheme synthase TERM 4704 3583234 - 3583198 - f 86 -14 -3.27298 | opp_overlap 3583204 3583208, overlap 3583199 3583204 3583208 TTCTCTAATTATTAA TTAAAATAAAGCCCTG AATAA CAGGGCTTTATTTTAC AACTACTCGTAATCT TERM 4705 3583233 - 3583199 - f 100 -17.5 -2.56164 | opp_overlap 3583204 3583208, overlap 3583198 3583204 3583208 TCTCTAATTATTAAT TAAAATAAAGCCCTG AATAA CAGGGCTTTATTTTA CAACTACTCGTAATC TERM 4706 3583228 - 3583204 - f 100 -13 -4.47217 | opp_overlap 3583204 3583208, overlap 3583199 3583198 3583208 AATTATTAATTAAAA TAAAGCCCTG AATAA CAGGGCTTTA TTTTACAACTACTCG TERM 4707 3583204 - 3583228 + F 95 -13 -4.12188 | opp_overlap 3583199 3583198 3583204 3583208, overlap 3583208 AATTATTAATTAAAA TAAAGCCCTG AATAA CAGGGCTTTA TTTTACAACTACTCG TERM 4708 3583208 - 3583224 + F 89 -9.4 -4.65933 | opp_overlap 3583204 3583199 3583198 3583208, overlap 3583204 ATTAATTAAAATAAA GCCCTG AATAA CAGGGC TTTATTTTACAACTA TERM 4709 3583224 - 3583208 - f 93 -9.4 -4.78981 | opp_overlap 3583208 3583204, overlap 3583204 3583199 3583198 ATTAATTAAAATAAA GCCCTG AATAA CAGGGC TTTATTTTACAACTA TERM 4710 3584419 - 3584404 - f 77 -6.8 -4.46212 | TTGCCGACGATAAAA CCACCG TTAT CAGTGG CAATGACCAGGCGCA TERM 4711 3585105 - 3585083 - f 70 -9 -3.33737 | opp_overlap 3585082, overlap 3585075 TATCAACGGCGACAA CGGCAGCCTG ACC CAGGCGGGCG ATCTGCTGGTCACCG TERM 4712 3588224 - 3588173 - f 76 -5.1 -4.78107 | CACCATGACCAAAAA CGCCTATGCCGATGTGGC-GACCGA CAGC TCGGTAAGCGACGT-GGCGCAGGCG CTGGACGCCGGTTAC TERM 4713 3589283 - 3589254 - f 70 -9.3 -3.44844 | opp_overlap 3589258, overlap 3589248 3589256 3589258 ATTATATAACACTAA TACAGGCCGCTTA TTAT TAAGCGGCCTTTT TAAATCATATCCCCT TERM 4714 3589281 - 3589256 - f 79 -11.9 -3.28842 | opp_overlap 3589258, overlap 3589254 3589248 3589258 TATATAACACTAATA CAGGCCGCTTA TTAT TAAGCGGCCTT TTTAAATCATATCCC TERM 4715 3589258 - 3589279 + F 100 -14.5 -4.69664 | opp_overlap 3589256 3589254 3589248 3589258 TATAACACTAATACA GGCCGCTTA TTAT TAAGCGGCC TTTTTAAATCATATC TERM 4716 3589279 - 3589258 - f 90 -14.5 -3.1984 | opp_overlap 3589258, overlap 3589256 3589254 3589248 TATAACACTAATACA GGCCGCTTA TTAT TAAGCGGCC TTTTTAAATCATATC yhfL 3589344 - 3589592 + | putative outer membrane lipoprotein TERM 4717 3589635 - 3589621 - T 100 -11.4 -5.76633 | opp_overlap 3589621 GCAGATACAAAAAAA CCGGGA TTT TCCCGG TTTTTTTACAGGTCT TERM 4718 3589621 - 3589635 + T 100 -11.4 -5.42862 | opp_overlap 3589621 GCAGATACAAAAAAA CCGGGA TTT TCCCGG TTTTTTTACAGGTCT trpS 3590741 - 3589737 - | tryptophanyl-tRNA synthetase gph 3591492 - 3590734 - | phosphoglycolate phosphatase rpe 3592162 - 3591485 - | ribulose-phosphate 3-epimerase TERM 4719 3592167 - 3592179 + r 75 -6.3 -4.43307 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTCTTGCAGG dam 3593016 - 3592180 - | DNA adenine methylase TERM 4720 3592542 - 3592554 + g 74 -3.3 -4.83615 | opp_overlap 3592540 3592543, overlap 3592543 ACTCACAGTAAAAGA ACGCA TTC TGCGC TTTTTCTGCAAAGTG TERM 4721 3592553 - 3592543 - G 74 -6.8 -4.29302 | opp_overlap 3592542 3592543, overlap 3592540 CTCACAGTAAAAGAA CGCA TTC TGCG CTTTTTCTGCAAAGT TERM 4722 3592900 - 3592879 - G 83 -7.3 -4.60073 | overlap 3592880 3592894 GATATAACGAGAAAA GTCGGTGTT AAGA AACACCGAT CCGGCACCCACAAAA TERM 4723 3592899 - 3592880 - G 73 -10.8 -3.34959 | overlap 3592879 3592894 ATATAACGAGAAAAG TCGGTGTT AAGA AACACCGA TCCGGCACCCACAAA damX 3594474 - 3593197 - | hypothetical protein TERM 4724 3593658 - 3593688 + g 71 -6.1 -4.29929 | gap 1 CCGGTTTCTTCGGTT CCGCAG-TCGTGGT TTTC GCCGTGGTCTGCGG TTTCTTAGGTTTAAT TERM 4725 3594197 - 3594213 + g 74 -2.2 -5.09426 | gap 1, overlap 3594199 3594200 ATGTACTGACGAGAG GCTGGCT TATG GGCC-GC TTTTTTACGCTTACG aroB 3595660 - 3594572 - | 3-dehydroquinate synthase TERM 4726 3595606 - 3595584 - G 85 -12.8 -3.53712 | overlap 3595580 3595602 AGCGGCAAGAATGAA GCTGGTTCGT TAA ACAAACCAGC CGCGATGGTGATCGG aroK 3596238 - 3595717 - | shikimate kinase I hofQ 3597941 - 3596703 - | outer membrane porin HofQ TERM 4727 3596869 - 3596855 - GR 74 -2 -5.00616 | opp_overlap 3596868, overlap 3596857 TTTTTCGCGAAAAAA TACCGC CCA GCGCCA GCGTCTCGCCGCTTT TERM 4728 3597551 - 3597564 + gr 70 -9.5 -3.06737 | overlap 3597542 CCGCTTTCGCCAGTT CGCCG GCAT CGGCG TATTGCAGGTTAATG yrfA 3598257 - 3597856 - | hypothetical protein TERM 4729 3597978 - 3597961 - GR 73 -10.5 -3.05384 | opp_overlap 3597970 CGCTCCCTGACGTAA CCACCGC CACT GCGGCGG CGCACAATTTTTACC yrfB 3598690 - 3598247 - | hypothetical protein yrfC 3599243 - 3598704 - | hypothetical protein TERM 4730 3598776 - 3598794 + g 74 -10.2 -3.53224 | CCCTTGCGCATCCTG CCGCGTGG CGC CCGTGCGG TTTAGCGGAAAACTG TERM 4731 3599143 - 3599117 - G 76 -2.8 -5.00616 | opp_overlap 3599121, overlap 3599121 CCTCCTGCCAAAAAA CCAACCGGGCGA TCG TCGCGAGGCTTG CTATCAGCAGCAGGG yrfD 3600022 - 3599243 - | hypothetical protein TERM 4732 3599329 - 3599285 - G 70 -9.4 -3.66654 | gap 2, overlap 3599289 CAGCGCAATCGCAAA GCGATAACCGTCCGGCGGAACC GGC GGTT--GGCGGACGGTTACGGC GCGCCAGGGGTCGAA TERM 4733 3601532 - 3601504 - g 70 -9.5 -3.32159 | TCAGAGTAAATTTAA CCGCGCGACGCAA GCT TTGCGTCAGGTGG GGTCGAACATCAAAC TERM 4734 3602158 - 3602137 - g 83 -10.1 -4.07568 | GCTGGTCGCGCAAAA CGGCACGCA GGAG TACGCGCCG CATGTGATCAATACG TERM 4735 3602172 - 3602182 + G 74 -8.2 -4.05446 | opp_overlap 3602172 3602170 CGCATGTGATCAATA CGCC GCT GGCG TTTCTGATTAAAAGC mrcA 3600119 - 3602695 + | peptidoglycan synthetase TERM 4736 3602697 - 3602724 + T 86 -11.4 -3.81755 | opp_overlap 3602704, overlap 3602704 ACGAACTGTTCTGAT CAAAAAAGGCGC TCCG GCGCCTTTTTTA TTGTGTTTAGCGGAT TERM 4737 3602717 - 3602704 - T 100 -9.5 -5.14563 | opp_overlap 3602697 3602704 GTTCTGATCAAAAAA GGCGC TCCG GCGCC TTTTTTATTGTGTTT TERM 4738 3602704 - 3602717 + T 100 -9.5 -5.66338 | opp_overlap 3602704, overlap 3602697 GTTCTGATCAAAAAA GGCGC TCCG GCGCC TTTTTTATTGTGTTT nudE 3603354 - 3602791 - | ADP-ribose diphosphatase NudE TERM 4739 3603410 - 3603427 + H 90 -9.9 -4.54343 | opp_overlap 3603399 CATACCGCACGGTTT CGGCAAT GCGA ATTGCCG TTTATTTACATTTAT TERM 4740 3604331 - 3604349 + G 72 -2.4 -4.85599 | overlap 3604332 TTGTTATTCTTTTTC TGTCTG ATAACGC CAGACG TTTTTGTACCGTGGA yrfF 3603677 - 3605809 + | hypothetical protein TERM 4741 3606130 - 3606150 + G 77 -8.1 -4.07885 | TTTGCGCCATGACGA CGGCGCAAG GGC CGCGCGCCG TTTTGCGCGACGATA yrfG 3605874 - 3606542 + | putative hydrolase TERM 4742 3606579 - 3606564 - g 77 -4.6 -4.93877 | overlap 3606566 CGCCATGAAAGAAAA GTCCTC CGTT GAGGTC AGACTGGATAAATGG TERM 4743 3606639 - 3606620 - g 74 -7 -4.36914 | CGCGTTTTTATAAAA CCCGCGCG CTGG CCCGCGAG ATGATTGAAGGCGGT TERM 4744 3606860 - 3606845 - g 85 -4.6 -5.16472 | overlap 3606847 AAAAACGCGAAAAAA TGGCGC AGGC GCGCAA GCTTAACTCCCTGAC yrfH 3606553 - 3606954 + | ribosome-associated heat shock protein Hsp15 hslO 3606979 - 3607857 + | Hsp33-like chaperonin TERM 4745 3607895 - 3607942 + T 87 -11.5 -3.86346 | gap 1, opp_overlap 3607939, overlap 3607871 3607871 3607940 ATTGCCTGATGGCGC TGCGCTTATCTGGCCTACAG CATCCCGCT CCGTAGGCCGGATAAG-GCA TTTATGCCGCCATCC yhgE 3609677 - 3607968 - | hypothetical protein TERM 4746 3608104 - 3608088 - G 71 -5.7 -4.36914 | opp_overlap 3608090, overlap 3608089 3608090 TTGCGTCTTAGAAAA CCCGTCC GGC AGTCGGG CGAACGCTTTCTGCG TERM 4747 3609904 - 3609892 - H 71 -3.3 -4.77165 | TTTTCCACAACAAAA GTAGG TTT CCTGC CATAATAACCGCCGC TERM 4748 3611594 - 3611581 - g 72 -3.8 -4.74801 | overlap 3611583 3611585 CAATGGCAGGAAAAA GCCA CCGCGC TGGC GAAACTGTTCATTGA pckA 3610057 - 3611676 + | phosphoenolpyruvate carboxykinase TERM 4749 3611725 - 3611750 + T 90 -13.4 -3.4799 | opp_overlap 3611725 3611729, overlap 3611717 3611729 ATCCGGCGTTGAGAA GAAAGGGAGG GTAATA CCTCCCTTTC TTATGCCTCTTTTGT TERM 4750 3611750 - 3611725 - T 83 -13.4 -3.28791 | opp_overlap 3611725 3611717 3611729, overlap 3611729 ATCCGGCGTTGAGAA GAAAGGGAGG GTAATA CCTCCCTTTC TTATGCCTCTTTTGT TERM 4751 3611729 - 3611746 + T 79 -8.4 -4.35091 | opp_overlap 3611725 3611729, overlap 3611725 3611717 GGCGTTGAGAAGAAA GGGAGG GTAATA CCTCCC TTTCTTATGCCTCTT TERM 4752 3611746 - 3611729 - T 79 -8.4 -4.30719 | opp_overlap 3611729 3611725 3611717, overlap 3611725 GGCGTTGAGAAGAAA GGGAGG GTAATA CCTCCC TTTCTTATGCCTCTT envZ 3613103 - 3611751 - | osmolarity sensor protein ompR 3613834 - 3613100 - | osmolarity response regulator TERM 4753 3614227 - 3614203 - g 90 -5.7 -5.22006 | gap 1 TCAGTATAATAAAAA GCGCCTG-CG TGAGAT CGACAGACGC GTCAGATATCTGACC greB 3614045 - 3614518 + | transcription elongation factor GreB TERM 4754 3616192 - 3616173 - g 77 -8.6 -4.10161 | gap 1 CATGATGGCGCAAAA CATCGTCGC CTG GCG-CGATG AGAACGGTCAGTTTC TERM 4755 3616511 - 3616489 - g 78 -6.8 -4.62904 | opp_overlap 3616488 3616489 3616492, overlap 3616490 AAAGAGCTGGAAAAA CCGGGCCGCG ACC CGCGTCCTGA ATTTAAAACCGCGCA TERM 4756 3616828 - 3616788 - g 93 -16 -3.13403 | overlap 3616799 GCGTCTGGATGAACA GCCCGGCGAAACCGCCGC TCGCC GCGGCGGCGCCGCCGATC GCGCGCAGGGCAACC TERM 4757 3616817 - 3616799 - g 85 -13.1 -3.54307 | overlap 3616788 AACAGCCCGGCGAAA CCGCCGC TCGCC GCGGCGG CGCCGCCGATCGCGC TERM 4758 3616870 - 3616858 - g 70 -6.9 -4.07568 | CGCCCGGCGTCAAAA GCGGC GAA ACCGC GCGGTCGTGACGCCC yhgF 3614617 - 3616947 + | paral putative RNase R TERM 4759 3616957 - 3616990 + F 95 -13.1 -4.14739 | opp_overlap 3616958, overlap 3616958 CGCTAATCGGGTAAT ACGCAGGCCGGGTTA CTTC TTATCCGGCCTGCGA TTTTGCAATACGTCC TERM 4760 3616989 - 3616958 - f 88 -14.4 -3.04322 | opp_overlap 3616957 3616958 GCTAATCGGGTAATA CGCAGGCCGGGTTA CTTC TTATCCGGCCTGCG ATTTTGCAATACGTC TERM 4761 3616958 - 3616989 + F 100 -16.6 -3.08522 | opp_overlap 3616958, overlap 3616957 GCTAATCGGGTAATA CGCAGGCCGGGTTA CTTC TTATCCGGCCTGCG ATTTTGCAATACGTC TERM 4762 3617212 - 3617195 - f 73 -4.2 -4.7908 | AAAAAGACAAATAAA TGTTGA GCCATA TCAACA TCGGCGCAAATTATC feoA 3617401 - 3617628 + | ferrous iron transport protein A TERM 4763 3617670 - 3617656 - g 89 -2.8 -5.56112 | opp_overlap 3617656 ATAAAAATGAAAAAA TTAACC ATT GGTTTA ATTGGTAATCCTAAT TERM 4764 3618494 - 3618505 + G 100 -5.8 -5.84381 | TCCTGAACCGCTTCC TCGG CTTA CCGA TTTTTTTGTTCGTGA feoB 3617647 - 3619965 + | ferrous iron transport protein B yhgG 3619978 - 3620214 + | hypothetical protein TERM 4765 3620220 - 3620251 + F 72 -10.2 -2.92668 | gap 1, overlap 3620219 CTTGCGTTAGCCTTC GCCGGGTAGCGACGT AAC GCGTC-TTATCCGGC CTTTATCCCGCCTTT TERM 4766 3620280 - 3620309 + F 100 -15.1 -4.21462 | gap 1 TTATCCCGCGTTATG TTGCCCGGTACGCG TCA CGC-TGCCGGGCAA TTTTGCGTCATGCCT TERM 4767 3620888 - 3620918 + G 71 -8.2 -3.8647 | TGAATTTGCCGACCC GGTGATGGCGCGTA AGC TATACGCCACCGCC TTTCCTCTGGTCGAT yfcI 3620460 - 3621374 + | putative cytoplasmic protein bioH 3622180 - 3621410 - | carboxylesterase BioH TERM 4768 3621670 - 3621693 + g 75 -6 -4.62069 | gap 1 GCACCTCTACATCCG GCATAG-GCTG CGC CAGCACTACGC TTTTTAAGGTGCGGG TERM 4769 3622403 - 3622389 - g 71 -4.9 -4.56597 | opp_overlap 3622390, overlap 3622390 CGCTGCCTGCAAAAA CCGCC GCCCT GGCAG CGTCTGGTGAGCGTC yhgH 3622218 - 3622901 + | gluconate periplasmic binding protein yhgI 3622960 - 3623535 + | putative DNA uptake protein TERM 4770 3623553 - 3623581 + F 72 -8.8 -3.48276 | gap 1, overlap 3623554 TTTTCCCCGCATCCA TGCCCGAT-GGCG CTTG CGCCTGTCGGGCC TTATCTGCCCCACCG TERM 4771 3623554 - 3623580 + F 78 -12.3 -2.68823 | gap 1, overlap 3623553 TTTCCCCGCATCCAT GCCCGAT-GGCG CTTG CGCCTGTCGGGC CTTATCTGCCCCACC gntT 3623912 - 3625228 + | GntP family, high-affinity gluconate permease in GNT I system TERM 4772 3625317 - 3625350 + T 100 -16.9 -3.9461 | opp_overlap 3625321 3625325, overlap 3625318 3625321 3625325 CTACGTGCTCTCACC ATAATAAAGCCGGGG AAAT CCCCGGCTTTATTAC TTCTTCTTCGCGGCC TERM 4773 3625318 - 3625349 + T 100 -20.4 -2.96444 | opp_overlap 3625321 3625325, overlap 3625317 3625321 3625325 TACGTGCTCTCACCA TAATAAAGCCGGGG AAAT CCCCGGCTTTATTA CTTCTTCTTCGCGGC TERM 4774 3625321 - 3625346 + T 100 -17.7 -3.62255 | opp_overlap 3625321 3625325, overlap 3625318 3625317 3625325 GTGCTCTCACCATAA TAAAGCCGGGG AAAT CCCCGGCTTTA TTACTTCTTCTTCGC TERM 4775 3625346 - 3625321 - T 100 -17.7 -3.40403 | opp_overlap 3625321 3625318 3625317 3625325, overlap 3625325 GTGCTCTCACCATAA TAAAGCCGGGG AAAT CCCCGGCTTTA TTACTTCTTCTTCGC TERM 4776 3625325 - 3625342 + T 100 -14.1 -4.4078 | opp_overlap 3625325 3625321, overlap 3625321 3625318 3625317 TCTCACCATAATAAA GCCGGGG AAAT CCCCGGC TTTATTACTTCTTCT TERM 4777 3625342 - 3625325 - T 100 -14.1 -4.35483 | opp_overlap 3625321 3625318 3625317 3625325, overlap 3625321 TCTCACCATAATAAA GCCGGGG AAAT CCCCGGC TTTATTACTTCTTCT malQ 3627425 - 3625347 - | 4-alpha-glucanotransferase TERM 4778 3625435 - 3625458 + g 83 -5.9 -4.93296 | overlap 3625436 AACATCTGCTCCAGC GTGGCGGTG AGCTTC CGCCGCCAG TTTTTATACTGATCG TERM 4779 3626896 - 3626864 - G 73 -9.1 -3.86015 | overlap 3626892 3626893 GATTCGCCGGATAAA GCGCGTGGATCGG ATTCAGG CCGATAAACGCGC CGCCGCGTGTCGCCA TERM 4780 3627225 - 3627235 + g 81 -2.4 -5.40072 | ACCGCGCCCCTCTAC CGGC AAC GCCA TTTTTTTACCCGCGG malP 3629828 - 3627435 - | maltodextrin phosphorylase TERM 4781 3628330 - 3628361 + g 71 -4.4 -4.62872 | gap 1, overlap 3628333 3628334 CGCTTGATGTCGCGA TACTGCTGACGGAAC TTC GCATCGTCAGC-GTA TTTTTCGAGGTTGAT TERM 4782 3629013 - 3629027 + g 80 -4.2 -5.00884 | GCACTGGAAGTATTG CTGCAT CAG ACGCAG TTTTTTACCCGCCGT TERM 4783 3630840 - 3630850 + G 74 -2.4 -5.06816 | ATCCGGTGATTCACG ACGC GAT GCGC TTTTTCTTACGGCAT TERM 4784 3631213 - 3631227 + G 85 -4.2 -5.26875 | ACTGGATAACGTGGA TGTCAG CAC CCGACA TTTTTTACTTAAAAG TERM 4785 3632669 - 3632656 - g 71 -4.5 -4.56775 | gap 1, opp_overlap 3632656 ATCCGGGCGGAAAAA CGACGC CCA GCG-CG TATTGCTTGATGCCT malT 3630422 - 3633127 + | transcriptional regulator MalT SC3448 3633829 - 3633269 - | hypothetical protein TERM 4786 3633556 - 3633542 - G 71 -6.4 -4.29829 | ATAATCATCAAGAAA CAGGCT CTT AACCTG ATGTGAATCCGTATC TERM 4787 3633768 - 3633755 - G 70 -6.7 -4.09739 | overlap 3633763 TGAAGGGCCGGAAAA GGGAT TAAC ATCCC TCTCCGGGATGGCGT rtcA 3634782 - 3633826 - | RNA 3'-terminal-phosphate cyclase TERM 4788 3634479 - 3634463 - G 75 -3.5 -4.87133 | opp_overlap 3634465 3634470, overlap 3634464 ACGCGGCAAATAAAA TCGGCGC TGG GCGCGGC CTGATTATGCGTCCC TERM 4789 3634582 - 3634534 - G 71 -11 -2.91873 | gap 2, overlap 3634531 3634536 ACCATCGGCAAACCA CAGCGCGGGCAGGACGGTTTGCAG CAC CAGCATACAA-C-TGCCCGCGCTG CCAATCGCGAAACGG TERM 4790 3634643 - 3634631 - G 74 -7.7 -4.07568 | GGCCCCGGCGTAAAA CGCAA CTG TTGCG AGCCCAGCTCGTCGC rtcB 3636081 - 3634864 - | putative cytoplasmic protein TERM 4791 3635298 - 3635320 + g 80 -9 -4.21194 | overlap 3635299 TCGGTTTTTCCACGC AGCGCTGGAG CGC CGCCAGCGCG TTTTCCATCATCGCC TERM 4792 3635299 - 3635319 + g 81 -12.5 -3.12395 | overlap 3635298 CGGTTTTTCCACGCA GCGCTGGAG CGC CGCCAGCGC GTTTTCCATCATCGC TERM 4793 3635981 - 3635968 - G 75 -5.9 -4.65263 | opp_overlap 3635966 3635968 ATGTTTGAAAATAAA CGGCA TTTT CGCCG TATTGATCAGCTGCT SC3451 3637978 - 3636425 - | putative ribonucleoprotein related-protein TERM 4794 3636596 - 3636614 + g 74 -4.5 -4.75174 | gap 1, opp_overlap 3636592 ATCGATACACACCAG GCGC-GCC TGCG GGTTGCGC TTTTTCAGTTCGATC TERM 4795 3637355 - 3637371 + g 77 -3.5 -5.01732 | opp_overlap 3637355 GTCGCCTTCACGAAA CGCCAGC AGC GCGCGCG TTTTTTCCGGCAGTT SC3452 3638123 - 3637971 - | hypothetical protein rtcR 3638168 - 3639751 + | sigma N (sigma 54)-dependent regulator of rtcBA expression (EBP familiy) glpR 3640506 - 3639748 - | DNA-binding transcriptional repressor GlpR TERM 4796 3640260 - 3640272 + g 100 -9.1 -5.16151 | GGGCCGCGACTTTGC GAGCG ATG CGCTC TTTTTCTTCCGTTTG TERM 4797 3640595 - 3640574 - R 74 -5.9 -4.56597 | gap 1 CCCGGCCTGGAAAAA TATCTCGACC ACA GGCCG-GATA CGCCTCACGTTCGTT glpG 3641430 - 3640600 - | intramembrane serine protease GlpG glpE 3641832 - 3641506 - | thiosulfate sulfurtransferase TERM 4798 3641723 - 3641713 - G 71 -8.2 -3.76952 | GTTAGTCAAGTGAAA CGCC TGC GGCG CATGACCCATGGCAT TERM 4799 3641981 - 3641996 + H 82 -7.6 -4.70879 | GTTTCTTTGCTATTA TGTTCG ATAA CGAACA TTTTTGAACTTTAAC TERM 4800 3643068 - 3643056 - g 74 -6.9 -4.3129 | opp_overlap 3643055 3643054 3643056, overlap 3643058 TATTCATGATGAAAA CGGCA AAG CGCCG CTGCTTTCCGTGTTT glpD 3642031 - 3643539 + | glycerol-3-phosphate dehydrogenase TERM 4801 3643549 - 3643566 + T 95 -12.7 -4.08767 | opp_overlap 3643545 3643547 3643546 TCGTAATAAAATCCG GGGCGGT TTAT ACCGCCC TTTTCGCCACATACC SC3458 3644131 - 3643586 - | hypothetical protein SC3459 3645694 - 3644141 - | putative periplasmic phosphate-binding protein TERM 4802 3645742 - 3645773 + r 93 -7.2 -5.63517 | opp_overlap 3645741 AAACATTCACGATAG CGGCAGACAGAAGT TGAA AGTTCCGGCTGCCG TTTTTTATTTACAGG gldA 3646904 - 3645795 - | glycerol dehydrogenase TERM 4803 3646433 - 3646416 - G 77 -4.1 -4.98531 | gap 1, overlap 3646417 3646418 CCCGGAAACCAAAAA GCGTACCG GCG CGGCA-GC AATAATACTGCTGTC tub 3647244 - 3648578 + | hypothetical protein TERM 4804 3648780 - 3648798 + F 82 -13.2 -2.87344 | opp_overlap 3648766 3648765 GCGGCGGTCGCGCGG TCCGTCAC CAT GTGACGGA TATCTGCGACGGCTG TERM 4805 3650296 - 3650317 + F 79 -9.3 -4.11692 | opp_overlap 3650291, overlap 3650298 GCTTAAATAATATCC CTGGCGGGC TACG GCTCGCCTG TTTTAAGGATCAATA TERM 4806 3650298 - 3650315 + F 79 -10.5 -3.65542 | opp_overlap 3650291, overlap 3650296 TTAAATAATATCCCT GGCGGGC TACG GCTCGCC TGTTTTAAGGATCAA yagE 3650334 - 3651239 + | putative dihydrodipicolinate synthetase TERM 4807 3651245 - 3651274 + T 100 -8.6 -5.27335 | gap 1, opp_overlap 3651252, overlap 3651252 GGGACTTTAAGCTAT GACGAAAGCGGGC TTCTT GCCCGCTGT-GTC TTTTTATTTCAGCAC TERM 4808 3651252 - 3651268 + T 77 -10.8 -3.40971 | opp_overlap 3651252, overlap 3651245 TAAGCTATGACGAAA GCGGGC TTCTT GCCCGC TGTGTCTTTTTATTT TERM 4809 3651268 - 3651252 - T 83 -10.8 -3.80461 | opp_overlap 3651252 3651245 TAAGCTATGACGAAA GCGGGC TTCTT GCCCGC TGTGTCTTTTTATTT yfaX 3652038 - 3651283 - | putative transcriptional regulator TERM 4810 3651722 - 3651705 - G 77 -7.7 -4.27117 | gap 1, opp_overlap 3651714 CTTTCAGAAGATAAA TGG-GGGC ATC GCCCTCCA GAACGCCAAGATGGC TERM 4811 3651846 - 3651858 + g 70 -2.7 -4.7373 | ACAGGCGTAGCCCCA GATAA TAC TTGTC TTTTTCCTGGCGTAA TERM 4812 3652197 - 3652180 - R 100 -14.1 -5.32882 | opp_overlap 3652180 TACCACGATAAAAAA CGGGGCC GTTT GGCCCCG TTCTCAAGCGTTAAA TERM 4813 3652180 - 3652197 + r 90 -14.1 -3.31322 | opp_overlap 3652180 TACCACGATAAAAAA CGGGGCC GTTT GGCCCCG TTCTCAAGCGTTAAA glgP 3654663 - 3652216 - | glycogen phosphorylase TERM 4814 3653254 - 3653266 + g 71 -10.5 -3.18681 | CGCCAGCCAGCGGCG CGGCG TAA CGCCG TTAGTGACGTTACAA TERM 4815 3653789 - 3653762 - G 70 -9.8 -3.33492 | overlap 3653763 3653765 TTATGCAGTTGATAA TGACGGTGCAGG ATAT CCTGCACTGTCG CCGAGACCAGAAAAT TERM 4816 3653788 - 3653763 - G 78 -13.3 -2.59881 | overlap 3653762 3653765 TATGCAGTTGATAAT GACGGTGCAGG ATAT CCTGCACTGTC GCCGAGACCAGAAAA TERM 4817 3653822 - 3653804 - G 79 -7.4 -4.50976 | GCCGAGACCAGAAAA TACTCCTG GCG CAGGCGTA GCTCTCGTCCGGAAT glgA 3656116 - 3654683 - | glycogen synthase TERM 4818 3654824 - 3654804 - G 72 -4 -4.75289 | gap 2, overlap 3654805 3654807 3654808 GACCACAACACAAAA GC-ACGC-CG AAT CGCGCGTAGC AACGACCAGGCATTA glgC 3657411 - 3656116 - | glucose-1-phosphate adenylyltransferase glgX 3659402 - 3657426 - | glycogen debranching enzyme TERM 4819 3659259 - 3659227 - G 71 -10 -3.48276 | overlap 3659230 3659239 GCGCCTGCCAGATAA CCATGCCAG-ACATCG CCG CGACGTCCTGGCA-GG TCATAGCGACGCTCA TERM 4820 3659257 - 3659230 - G 71 -11.4 -2.88822 | gap 1, overlap 3659227 3659239 CCTGCCAGATAACCA TGCCAG-ACATCG CCG CGACGTCCTGGCA GGTCATAGCGACGCT TERM 4821 3659309 - 3659294 - G 74 -3.2 -4.8622 | overlap 3659295 CTCGGGAATCAAAAA CGCACA GCTC TACGCG CTCCGCATGGGCGGA TERM 4822 3659344 - 3659330 - G 74 -10 -3.6422 | overlap 3659328 CATGGGCGGAAAAGA GCGTGA AAT TCACGC CATGACCGTCATACG glgB 3661585 - 3659399 - | glycogen branching enzyme TERM 4823 3661834 - 3661819 - R 91 -6.1 -5.48825 | opp_overlap 3661818 TATTACGCAAAAAAA GGGTG ACGATG CACCC CTGGTTTAACACAAA TERM 4824 3661867 - 3661880 + r 73 -9.5 -3.30124 | TCCCCGCCGGATGGC GGCGC TGAC GCGCC TTATCCGGCCTACAG TERM 4825 3661975 - 3661917 - R 70 -8.8 -3.30243 | gap 1 ACGCAGGCCCGATAA GCGCTGCAATAGCCACTACGCCAACTG GCGCAG CATTCGACGCAGCGGCT-CGGCGGCGC CCCATAACAACTGGT asd 3663038 - 3661932 - | aspartate-semialdehyde dehydrogenase SC3470 3663089 - 3663232 + | hypothetical protein TERM 4826 3663397 - 3663372 - T 93 -6.2 -5.80364 | gap 2 ACCTCAATAAAAAAA CCGGGT-A-GCG ATTA CGCCTTACCCGG CTTACGGTGTCGATA gntU 3664802 - 3663462 - | low affinity gluconate transporter TERM 4827 3664353 - 3664335 - G 95 -8 -5.10461 | overlap 3664336 CCCAGGCAACAAAAA CGCCGCGG CTG CCGCCACG CCCGCAAACAGCGGA TERM 4828 3664743 - 3664710 - G 95 -15.3 -3.24188 | opp_overlap 3664719 TGAGACGACCATTAA CGCGACGAAGGCGTG CATA CGCGCCTTCATCACG AGAAACAGCAGCAGT gntK 3665332 - 3664799 - | gluconate kinase 1 gntR 3666532 - 3665471 - | transcriptional repressor gnt-I, gntUKR (GalR/LacI familiy) TERM 4829 3665958 - 3665925 - G 75 -12.5 -2.64422 | gap 1, opp_overlap 3665931, overlap 3665915 AGATAGGCGATATGA CGATGACCACGCGCGA TAA TCGCG-GCGGTCATCT GACGGGCGGCCTCGA TERM 4830 3666575 - 3666543 - R 70 -4.8 -4.40993 | gap 1, opp_overlap 3666553 GACAAACGATGAAAA GCCGGATGGCAACGC TTTC GCGTCTT-ATCCGGC CTACAAAAGGTTACA yhhW 3667291 - 3666596 - | hypothetical protein TERM 4831 3666880 - 3666898 + g 76 -12.4 -3.14211 | opp_overlap 3666894 GTTGCTTGCCCTGCG CGGCGTCG AAG CGACGCTG TTCGTAGCGCGGCGT yhhX 3668452 - 3667415 - | putative dehydrogenase TERM 4832 3668728 - 3668715 - H 100 -8.1 -6.40073 | AACCCAAAAAAAAAA CCAGC AAAA GCTGG CCAAAATAATACTGG yhhY 3668920 - 3669408 + | putative acetyltransferase YhhY TERM 4833 3670425 - 3670412 - g 87 -2.4 -5.60993 | TCTCGCACAAAAAAA TGAC ATACCG GTCA TCATCAATCCAGCGC rbsK 3669672 - 3670886 + | putative transcriptional regulator of sugar metabolism TERM 4834 3671217 - 3671205 - g 81 -4.1 -5.2853 | CAGCTAAAAATAAAA CCAAA CGC TCTGG AGTCCATTAAAGAGT SC3478 3670902 - 3671663 + | putative cytoplasmic protein TERM 4835 3671695 - 3671668 - f 100 -5.6 -5.86976 | opp_overlap 3671672 3671689, overlap 3671671 3671672 CCAGAAAATAAAAAA CAATGGAGTAAC GAAA GTTACTCCTTTT ATAAAATATAAGGAT TERM 4836 3671692 - 3671671 - f 85 -7.3 -4.94109 | opp_overlap 3671672 3671689, overlap 3671668 3671672 GAAAATAAAAAACAA TGGAGTAAC GAAA GTTACTCCT TTTATAAAATATAAG TERM 4837 3671672 - 3671691 + F 93 -10.8 -4.41548 | opp_overlap 3671671 3671668 3671672, overlap 3671689 AAAATAAAAAACAAT GGAGTAAC GAAA GTTACTCC TTTTATAAAATATAA TERM 4838 3671691 - 3671672 - f 79 -10.8 -3.52805 | opp_overlap 3671672 3671689, overlap 3671671 3671668 AAAATAAAAAACAAT GGAGTAAC GAAA GTTACTCC TTTTATAAAATATAA SC3479 3671717 - 3672688 + | putative inner membrane protein TERM 4839 3673752 - 3673728 - T 86 -12.1 -3.62591 | overlap 3673730 GGCATAATCTGCAAA TAGCCCGGTGT CTG ACACCGGGCCT GGAATTAAAAATCAG TERM 4840 3673750 - 3673730 - T 100 -16.9 -3.39028 | overlap 3673728 CATAATCTGCAAATA GCCCGGTGT CTG ACACCGGGC CTGGAATTAAAAATC ggt 3675506 - 3673764 - | gamma-glutamyltranspeptidase periplasmic precursor TERM 4841 3673915 - 3673926 + g 77 -7.2 -4.37092 | AACTTTAGCGTATCG GGGC TGAA GCCC TTTTCTACCCGCAGT TERM 4842 3674352 - 3674369 + g 71 -4.7 -4.55287 | overlap 3674354 CTGGTTGCTTTCATA CGGGGCG AGCT TGCCCGG TTTTATCTGGCTGGA yhhA 3675632 - 3676048 + | hypothetical protein ugpQ 3676801 - 3676061 - | cytoplasmic glycerophosphodiester phosphodiesterase TERM 4843 3676157 - 3676110 - G 86 -15.1 -2.99471 | gap 3, opp_overlap 3676118, overlap 3676113 3676117 CGATCGGTACAGATA CAATCCACGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC-T-GATTG ACGGTATACACCAGA TERM 4844 3676155 - 3676113 - G 79 -11.3 -3.64198 | gap 2, opp_overlap 3676118, overlap 3676110 3676117 TCGGTACAGATACAA TCCACGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC-TGAT TGACGGTATACACCA TERM 4845 3676152 - 3676117 - G 83 -15.4 -2.65591 | gap 1, opp_overlap 3676118, overlap 3676113 3676110 TACAGATACAATCCA CGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGCT GATTGACGGTATACA TERM 4846 3676118 - 3676151 + g 83 -14.5 -2.72991 | gap 1, opp_overlap 3676117 3676113 3676110 ACAGATACAATCCAC GCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC TGATTGACGGTATAC ugpC 3677868 - 3676798 - | glycerol-3-phosphate transporter ATP-binding subunit ugpE 3678716 - 3677871 - | glycerol-3-phosphate transporter membrane protein TERM 4847 3678175 - 3678159 - G 91 -10.1 -4.57073 | overlap 3678143 GATGTCGCGGAAAAA GCGCATC GGC GACGCGC CGTCAATACGGGCCG ugpA 3679600 - 3678713 - | glycerol-3-phosphate transporter permease TERM 4848 3679679 - 3679643 - R 81 -13.1 -2.71011 | opp_overlap 3679633 ATGGCGGTGCAAGCA CCTTATCCGGCCTACAA ACG CTGTAGGCCTGATAAGC GCAGCGCCACCAGGC ugpB 3681021 - 3679705 - | glycerol-3-phosphate transporter periplasmic binding protein TERM 4849 3679914 - 3679924 + g 72 -2.4 -4.93296 | overlap 3679913 GGCGAGTGGCGATAT CCGC ACC GGGG TTTTTATCGTAATAA TERM 4850 3679977 - 3679991 + g 85 -4.9 -5.16237 | overlap 3679978 AGGCGGCGGTGGTAA TCGGC AGGTA GCCGG TTTTTTGATGCCATT TERM 4851 3681050 - 3681063 + r 72 -5.2 -4.66537 | opp_overlap 3681060, overlap 3681049 TTTTGTGCCGGGATG CGCG ATATCA CGCG TTTTATGTTCGCGGG TERM 4852 3681136 - 3681110 - R 70 -2.4 -5.04175 | overlap 3681113 CGAATGACAGAAAAA TAACTTTTTTAT TAC AAAAAAAAGATA GTAAGGCGACAGAGA doc 3681648 - 3681280 - | hypothetical protein yhhV 3681866 - 3681645 - | putative cytoplasmic protein TERM 4853 3681920 - 3681933 + r 76 -8.1 -4.14013 | opp_overlap 3681873 3681872 3681920 ACACGTACAAAAAAA GAGCC ATCA GGCTC TTTTGAAAAATTTTA TERM 4854 3681933 - 3681920 - R 100 -8.1 -5.65177 | opp_overlap 3681920, overlap 3681873 3681872 ACACGTACAAAAAAA GAGCC ATCA GGCTC TTTTGAAAAATTTTA livF 3682710 - 3681997 - | leucine/isoleucine/valine transporter ATP-binding subunit livG 3683479 - 3682712 - | leucine/isoleucine/valine transporter ATP-binding subunit TERM 4855 3683090 - 3683121 + g 88 -11.6 -4.07568 | gap 1, opp_overlap 3683116, overlap 3683079 CGCCGCGCGGTCCAG CGCTTCGCTTTGCGC GCG GCGGAAAGCGG-GCG TTTTCAACAGGCCGG livM 3684753 - 3683476 - | leucine/isoleucine/valine transporter permease subunit livH 3685676 - 3684750 - | branched-chain amino acid transporter permease subunit LivH TERM 4856 3685714 - 3685694 - H 75 -9.6 -3.55622 | overlap 3685695 GGTAACCTTTTTAAA CCCGCCCG GCGTG CGGGCGGT GGGATAACTTATCTT TERM 4857 3685713 - 3685695 - H 81 -13.1 -2.73159 | overlap 3685694 GTAACCTTTTTAAAC CCGCCCG GCGTG CGGGCGG TGGGATAACTTATCT TERM 4858 3686142 - 3686160 + H 72 -8.8 -3.58343 | CCATTAGCCCGTGCC TGGCGCAG CAT CTGCCCCA TTTCCGGGTAGTAGC TERM 4859 3686284 - 3686267 - H 75 -2.7 -5.2112 | opp_overlap 3686275, overlap 3686235 3686275 AATACCATCAAAAAA GACAATA TTGG CATTGCC CTGCTTCAGACCATC yhhK 3687267 - 3687650 + | hypothetical protein SC3494 3688165 - 3687647 - | hypothetical protein TERM 4860 3687748 - 3687722 - G 95 -9.5 -4.83246 | gap 1, opp_overlap 3687722 GGATAAAGAAATAAA GCCCA-GCCTCT GATA AAAGGCCTGGGC TTTTTCGTTTAACGC TERM 4861 3687722 - 3687748 + g 91 -7.3 -4.98531 | gap 1, opp_overlap 3687722 GGATAAAGAAATAAA GCCCA-GCCTCT GATA AAAGGCCTGGGC TTTTTCGTTTAACGC SC3495 3688438 - 3688169 - | hypothetical protein TERM 4862 3688478 - 3688458 - R 77 -10.5 -3.29829 | opp_overlap 3688455 3688468, overlap 3688470 3688472 GAGACTCCTGGATAA TGTACGGTA ATA CACCGTACA TACAGTGTATTTCGT TERM 4863 3688563 - 3688538 - R 80 -5.4 -5.04385 | gap 1 TACAGGCGCAAAAAA GCCGGAT-GGC GCTTT GCTTATCCGGC CTACGAAGTGCTCGT livJ 3689776 - 3688616 - | Leu/Ile/Val/Thr-binding protein precursor TERM 4864 3689204 - 3689239 + g 71 -6 -4.3208 | opp_overlap 3689224 3689225 CAGCCCTTCGCCGTA CTGCTGCTTATCGTGG ATAA TCGCGATGCGCTGCGG TTTTACCTTCTCCAG TERM 4865 3689336 - 3689358 + g 70 -9.8 -3.41051 | overlap 3689354 GCCGCGCGCGGTCAG CTCCGGCG CGGTCGC CGCCGGGG TTATCATCAGGATAC TERM 4866 3689920 - 3689907 - R 71 -9.5 -3.25823 | opp_overlap 3689912 GGTGGGGGAGAGGAA GGGCC CGTA GGCCC GATAAGCGAAGCGCC TERM 4867 3690019 - 3689998 - R 100 -10.9 -5.49579 | opp_overlap 3689998 CTACAAAAAACAAAA CCCCCGAAT TCAC ATTCGAGGG TTCATTGGCAATTCG TERM 4868 3690045 - 3690065 + r 76 -5.3 -4.74801 | opp_overlap 3690044, overlap 3690034 ATTCGCGAAGATTAC GCTTCGATC GCA GCGCGAAGC TTTTTCATGGCGTTC rpoH 3690895 - 3690041 - | RNA polymerase factor sigma-32 TERM 4869 3691088 - 3691124 + r 93 -14.5 -3.30903 | opp_overlap 3691081 3691084 AGAGACAACAGGGAC TCTTTCCCTGCGAACGG AAG CCCATTGCAGGGAAAGA TTATACCACGATTTT ftsX 3692196 - 3691141 - | cell division protein FtsX ftsE 3692785 - 3692189 - | cell division protein FtsE TERM 4870 3692402 - 3692428 + g 89 -13.6 -3.65046 | overlap 3692405 CGCTGGCTTATTGAC CACCGCGCGGGC GAT GCCCACGCGCTG TTGTTCGCCTCCGGA TERM 4871 3692405 - 3692425 + g 78 -13.9 -2.64045 | overlap 3692402 TGGCTTATTGACCAC CGCGCGGGC GAT GCCCACGCG CTGTTGTTCGCCTCC ftsY 3694335 - 3692860 - | cell division protein FtsY TERM 4872 3692914 - 3692894 - G 73 -5.3 -4.63486 | overlap 3692895 3692909 AGTGCCTCAATAAAA TCGTCCGCC TTA AACGGACGC AAATCCTCGATACGT TERM 4873 3693290 - 3693264 - G 75 -6.4 -4.61231 | opp_overlap 3693267, overlap 3693265 3693267 GGATAGCGTCAAAAA TCACCGAGGCGG AGT CCGCGCCGGTAT GCTGGGCGATAACCG TERM 4874 3693289 - 3693265 - G 70 -9.9 -3.36256 | opp_overlap 3693267, overlap 3693264 3693267 GATAGCGTCAAAAAT CACCGAGGCGG AGT CCGCGCCGGTA TGCTGGGCGATAACC TERM 4875 3693287 - 3693267 - G 71 -10.3 -3.24422 | opp_overlap 3693267, overlap 3693265 3693264 TAGCGTCAAAAATCA CCGAGGCGG AGT CCGCGCCGG TATGCTGGGCGATAA yhhF 3694461 - 3695057 + | 16S rRNA m(2)G966-methyltransferase yhhL 3695047 - 3695316 + | hypothetical protein yhhM 3695709 - 3695338 - | hypothetical protein TERM 4876 3695603 - 3695619 + g 78 -6.5 -4.58283 | overlap 3695616 TTTTGCTGTAACGGC GCCGC CTCATTA GCGGC TTTTTCCCGCCGTTG TERM 4877 3695921 - 3695935 + G 73 -5.6 -4.57569 | overlap 3695912 3695917 CCTATCGCGGGCCAG CCTGGC AAC GCTGGG TTTTTAAGCCCGTCA yhhN 3695851 - 3696477 + | hypothetical protein TERM 4878 3696492 - 3696511 + F 80 -12.2 -2.95223 | opp_overlap 3696484 3696485, overlap 3696506 AATAATAGCGCTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTCCGGTTA TERM 4879 3696514 - 3696555 + F 75 -9.5 -3.48593 | opp_overlap 3696484 3696485, overlap 3696506 3696515 GTCGACTCCAGAGTG TATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGACG TTATGTCGACCCCTG TERM 4880 3696515 - 3696554 + F 71 -10.8 -2.68942 | opp_overlap 3696484 3696485, overlap 3696506 3696514 TCGACTCCAGAGTGT ATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGAC GTTATGTCGACCCCT TERM 4881 3697011 - 3697022 + G 71 -7.2 -3.96327 | opp_overlap 3697004 TTTAACCACCCGTTC GGCC AACT GGCC TTTATCGTCACCACT TERM 4882 3697164 - 3697182 + G 78 -11.8 -3.17051 | overlap 3697162 GGCGCGACGGCGGAG GCAGCAAT GGT ATTGCTGC TGTTCCTCATCGGCG TERM 4883 3697447 - 3697411 - g 95 -15.3 -3.73224 | opp_overlap 3697412 CCAGCTTTGATGAAA GCGCGCT-CACCGGCGA GTCTA TC-CCGGTGGAGCGCGC AACGGGCGACAAAGT zntA 3696558 - 3698756 + | zinc/cadmium/mercury/lead-transporting ATPase TERM 4884 3698767 - 3698789 + F 93 -14.8 -3.30007 | overlap 3698765 3698780 3698782 3698787 ACTAATCTTCTCCCG CCCGGCGGCG TCG TGTCGCCGGG TTATCCCGCGATATT TERM 4885 3699214 - 3699183 - g 77 -3.6 -5.05782 | gap 1, overlap 3699184 ACGCATGTTAAAAAA TCAGCGCGATCCCGC CTC GCTGGA-CGCCATGA ACACGCTGTTAACCA TERM 4886 3699662 - 3699644 - g 70 -8.8 -3.70902 | opp_overlap 3699647, overlap 3699645 3699647 TGGCGCACATTCAAA CGATCGCC GAC GGCGATCT TACCCATGAGATAGA TERM 4887 3699661 - 3699645 - g 72 -12.3 -2.82327 | opp_overlap 3699647, overlap 3699644 3699647 GGCGCACATTCAAAC GATCGCC GAC GGCGATC TTACCCATGAGATAG tcp 3698956 - 3700599 + | methyl-accepting transmembrane citrate/phenol chemoreceptor yhhP 3700868 - 3700623 - | cell developmental protein SirA yhhQ 3701038 - 3701703 + | hypothetical protein TERM 4888 3701876 - 3701854 - g 87 -8.3 -4.6391 | AACAACGATACAAAA GCGTCGGCA GAAAG CGCCGCCGC GGAAAGCCAGGCCTC dcrB 3701776 - 3702333 + | hypothetical protein TERM 4889 3702351 - 3702378 + T 100 -14.1 -5.40072 | TTTACGACGATGATG CGGCCTCCGGC AGTGCA GACGGAGGCCG TTTTTTTAAGCGCCA yhhS 3703554 - 3702337 - | hypothetical protein TERM 4890 3703058 - 3703041 - G 71 -10.5 -3.18945 | overlap 3703039 CCCAGGCATAACACA GCACGCC CAGC GGCGCGC CCATCGCCATTGCGC TERM 4891 3704463 - 3704486 + G 72 -3.8 -4.77438 | TTTAACGGTTTTTAC GAGTGCGT ACTGGTCG GCGCGCTC TTTTTGGTGGTCCAT yhhT 3703686 - 3704735 + | PerM family permease acpT 3704787 - 3705365 + | holo-(acyl carrier protein) synthase 2 nikR 3705421 - 3705858 + | nickel responsive regulator yhhJ 3707085 - 3705961 - | ABC transporter ATP-binding protein yhiH 3709826 - 3707085 - | mtultidrug ABC transporter permease/ATPase TERM 4892 3708930 - 3708917 - G 70 -3.1 -4.7629 | gap 1 CGAGGAAGCCAAAAA TCTCGC CGC GCG-GA ATACGGAAATTAACA TERM 4893 3709894 - 3709905 + r 74 -7.2 -4.1964 | GAACCTAGGCCATTC CCGG CAAA CCGG TTTTGACATATTCCA yhiI 3710815 - 3709883 - | paral putative membrane protein TERM 4894 3709986 - 3710001 + g 70 -6.8 -4.11394 | overlap 3709987 AGCTTCAGCCGTTCA TCGTGG GTTT CCACGG TTTTGGGCGTGAACT TERM 4895 3710535 - 3710547 + g 70 -9.1 -3.71645 | TGTTTGACGACCGAC TGCGC GGC GCGCA TTTCACTCTGGCGTT yhiN 3712392 - 3711196 - | hypothetical protein TERM 4896 3711685 - 3711675 - G 77 -8.2 -4.17089 | TGGAAATCTGTAAAA CGGC GGG GCCG GACAGCCCACGATGG TERM 4897 3712102 - 3712092 - G 86 -6.8 -5.07053 | opp_overlap 3712092 3712091 AATCATCGCAAAAAA GCTG TCC CAGC GTTTTCTCATGCCAG TERM 4898 3712642 - 3712662 + G 75 -4 -4.95167 | gap 1 TACATTTGTTTGCTG GCCTGG-AT TTAC ATACCGGGC TTTTATTATTGCTTG TERM 4899 3713242 - 3713223 - g 74 -4.2 -4.68655 | overlap 3713219 GAACGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC GTTCTGGACGCGTAT pitA 3712623 - 3714119 + | PiT family, low-affinity phosphate transporter TERM 4900 3714158 - 3714126 - T 72 -8.4 -3.77219 | gap 1, overlap 3714127 ATTATTTAAGCCAAA TGGGCCGGA-TAGCG CTGT CGCTAATCCGGCCTG TCAGGATGAAACGAC TERM 4901 3714157 - 3714127 - T 77 -11.9 -2.8585 | gap 1, overlap 3714126 TTATTTAAGCCAAAT GGGCCGGA-TAGCG CTGT CGCTAATCCGGCCT GTCAGGATGAAACGA TERM 4902 3714229 - 3714250 + T 100 -13.7 -5.8187 | opp_overlap 3714229 GCTTATCTAACACAA GCGGGTCAG GAAA CTGGCCCGC TTTTTTTATTCAGTG TERM 4903 3714250 - 3714229 - T 86 -11.5 -3.68988 | opp_overlap 3714229 GCTTATCTAACACAA GCGGGTCAG GAAA CTGGCCCGC TTTTTTTATTCAGTG uspB 3714595 - 3714260 - | universal stress protein UspB uspA 3714983 - 3715417 + | universal stress protein A TERM 4904 3715530 - 3715513 - f 74 -8.3 -3.9461 | opp_overlap 3715513 GGCTCTCAACAACAA CGCCCGC TTAT GTGGGCG TTTTGTTTATCCCCC TERM 4905 3715513 - 3715530 + F 100 -10.5 -4.99043 | opp_overlap 3715513 GGCTCTCAACAACAA CGCCCGC TTAT GTGGGCG TTTTGTTTATCCCCC TERM 4906 3715835 - 3715858 + G 77 -4.4 -4.8622 | overlap 3715837 CGATTTGGCTATTAC GGCGTCCAGG GCAT CCTGGCGGTC TTTTTCGTTAAACAA yhiP 3715742 - 3717214 + | inner membrane transporter YhiP yhiQ 3718064 - 3717306 - | putative methyltransferase TERM 4907 3718037 - 3718020 - G 74 -9.8 -3.7319 | opp_overlap 3718019 3718018 AGCCAGAACAGATAA GGCGCC GTCTGT GGCGCC CGTTTCATCCATTAA opdA 3720113 - 3718071 - | oligopeptidase A TERM 4908 3719166 - 3719180 + g 71 -4.2 -4.59773 | overlap 3719168 TTTGGCGAAGGCGCG CAGCTG GGC CAGCTC TTTTTCCCCCTGCGG TERM 4909 3720289 - 3720258 - R 73 -10.3 -3.01712 | gap 1, opp_overlap 3720283 GCCGCCCCTTTAACA TCATCCCGGCTTAC GTTTT ATAAGCCGGG-TGA CAACGTCAGCGCGTT SC3524 3721566 - 3720295 - | putative phosphatase TERM 4910 3720426 - 3720450 + g 71 -11.4 -2.98823 | opp_overlap 3720415, overlap 3720443 TTAACGCCTGACGCT GCGCTGGCGA CAGGT TCGGCAGCGC TGTCTGTAGCAGAAC TERM 4911 3721450 - 3721438 - G 70 -9.1 -3.76492 | opp_overlap 3721438 3721438, overlap 3721439 CTCAAGGTCATTAAA GGCGA CGC TCGCC GAGTCGGGCGTCACG TERM 4912 3722309 - 3722288 - g 95 -10.9 -4.58773 | overlap 3722282 CTTATGAAATGAAAA CCGACTACC AGGC GGTAGTCAG CGGCATCAGCGAGGG yhiR 3721777 - 3722619 + | hypothetical protein TERM 4913 3723444 - 3723434 - g 71 -4.6 -4.66163 | overlap 3723436 AGCGGTAGTGAAAAA CGCC GAC GGCA GTCTGACTCTGGAAC gor 3722724 - 3724076 + | glutathione reductase csbX 3725291 - 3724176 - | Alpha-ketoglutarate permease TERM 4914 3724358 - 3724341 - GT 71 -6.9 -4.15044 | TGCGGGGGCAATAAA GGCGCCA AGCC CAGCGCC CAGATTAAGAACCGA TERM 4915 3724674 - 3724619 - GT 78 -6.5 -4.61633 | overlap 3724621 3724634 AGAGATTCGCAAAAA TAGCTACCAGAAAAACAGA-TGACCAC ATAT GTAGCCACTCTGTTTTACT-ATAGCCA TAACTAATAAGGTAT TERM 4916 3724660 - 3724634 - GT 77 -4.5 -4.9218 | gap 1, overlap 3724621 3724619 TAGCTACCAGAAAAA CAGA-TGACCAC ATAT GTAGCCACTCTG TTTTACTATAGCCAT SC3528 3725428 - 3725264 - | alpha-ketoglutarate permease SC3529 3726424 - 3725471 - | hypothetical protein TERM 4917 3725664 - 3725653 - G 70 -3 -4.74518 | AAGTATCAAAATAAA TCAA TCCA TTGA AATTAACGCGTTTAG TERM 4918 3726558 - 3726542 - H 78 -6.7 -4.60487 | TATTAGTCTTAAAAA TTTTACT GCG AGTAAAA TGCAAAAATAAAACA TERM 4919 3726744 - 3726725 - g 84 -6.4 -5.03145 | opp_overlap 3726728, overlap 3726728 GAACTGGGTAAAAAA GAACGAGC AATC GCTCGTTT CATTCATGATAATCC TERM 4920 3726741 - 3726728 - g 87 -8.1 -4.61482 | opp_overlap 3726728, overlap 3726725 CTGGGTAAAAAAGAA CGAGC AATC GCTCG TTTCATTCATGATAA TERM 4921 3726728 - 3726741 + G 74 -8.1 -3.97042 | opp_overlap 3726725 3726728 CTGGGTAAAAAAGAA CGAGC AATC GCTCG TTTCATTCATGATAA rpiR 3726653 - 3727534 + | protein rpiR rbsK 3727648 - 3728466 + | ribokinase TERM 4922 3728502 - 3728553 + T 70 -10.3 -2.51464 | gap 2, overlap 3728501 3728504 AAGGCCACCGACCTG CATTCATCGCTCTGTGCGCCCATCT TCAA GGGTGGGCGCACA-AGCC-TGCATG ATTAATACGTACTGA aspG 3729598 - 3728555 - | putative L-asparaginase TERM 4923 3729441 - 3729462 + g 74 -6.5 -4.28067 | overlap 3729442 GTTTGCACGCCAAGT TCACCGGAT TTAT ATCCGGCGG TTTGTGTATTATTGG TERM 4924 3729580 - 3729597 + g 70 -2.8 -4.75472 | opp_overlap 3729569 GCAACACGGCGGCCA TGAAAA CTCTGA TTTTCA TTTTCTTCCTCTGAA dcuB 3730976 - 3729657 - | anaerobic C4-dicarboxylate transporter TERM 4925 3729842 - 3729831 - G 71 -7.2 -3.94772 | overlap 3729829 CGGAATAAAGAAATA GCCG TTAA CGGC AGGCCAGGAGCCGAT yurL 3731875 - 3731030 - | ribokinase family sugar kinase TERM 4926 3731114 - 3731124 + g 78 -6.8 -4.56969 | overlap 3731113 GCCCTGCCGCATGGC GCGT AAC ACGC TTTCTTTATCGGGTT psi 3732913 - 3731939 - | putative phosphosugar isomerase TERM 4927 3733058 - 3733034 - R 100 -11.5 -6.02546 | GGAAACCAAAAAAAA TCGGGATCC GCGATCT GGATCCCGA TTCAGCCTGCTCTTC yurK 3733811 - 3733092 - | GntR family transcriptional regulator TERM 4928 3733143 - 3733154 + g 71 -5.8 -4.33819 | opp_overlap 3733128 3733143 3733139 CTGTTGCGAAACGCA GGAG AGTT CTCC TTTGTTATCAATCAT treF 3734137 - 3735786 + | trehalase TERM 4929 3735819 - 3735840 + T 88 -5.9 -5.60689 | opp_overlap 3735819 GAATCGCATCATAAA TGGCTGA CTGAATTT TCAGCCA TTTTTTATTGTCTGC SC3538 3737388 - 3735799 - | hypothetical protein TERM 4930 3737426 - 3737404 - H 84 -8.4 -4.57073 | opp_overlap 3737407 3737417, overlap 3737407 TATCTTCCCTAAAAA GACGATCCCG CGA CGAGATCTTC GTTTTCTTTTAATTA TERM 4931 3737417 - 3737427 + H 75 -3.2 -5.19998 | opp_overlap 3737407 3737404, overlap 3737407 AAGACGATCCCGCGA CGAG ATC TTCG TTTTCTTTTAATTAT TERM 4932 3737934 - 3737961 + G 100 -12.1 -5.38249 | overlap 3737914 GCGAAACGCTTATTG CGCTGATGTTC AGCATC GGACATCAGCG TTTTTTATCATTAAT SC3539 3737669 - 3738025 + | putative phage endolysin yhjB 3738588 - 3738031 - | putative transcriptional regulator (LuxR/UhpA familiy) TERM 4933 3738489 - 3738503 + g 71 -4.2 -4.64992 | overlap 3738489 3738488 TATCCAGCATGACCA GCGC ATCCGGC GCGC TTTCTATTTTTTGCC TnpR 3739842 - 3738634 - | transposase of Tn10 yhjD 3741574 - 3742602 + | hypothetical protein TERM 4934 3743321 - 3743347 + G 74 -10 -3.64822 | GACGATAGGTATTTT CGCGCCGCTGCT GCT GGCGCTGGCGCG TTTCGGTCAGGGACT yhjE 3742953 - 3744275 + | MFS family transporter TERM 4935 3744277 - 3744307 + T 79 -9.7 -3.68244 | gap 1, opp_overlap 3744278, overlap 3744278 3744280 ATCAGGCGTTGTAAT AG-GGCGCCGGATG GCAT CATCCGGCGCTACG TTTCACGTTACTGCT TERM 4936 3744278 - 3744306 + T 82 -13.2 -2.80464 | gap 1, opp_overlap 3744278, overlap 3744277 3744280 TCAGGCGTTGTAATA G-GGCGCCGGATG GCAT CATCCGGCGCTAC GTTTCACGTTACTGC TERM 4937 3744305 - 3744278 - T 75 -11.2 -3.02144 | opp_overlap 3744278 3744277 3744280 TCAGGCGTTGTAATA GGGCGCCGGATG GCAT CATCCGGCGCTA CGTTTCACGTTACTG TERM 4938 3744280 - 3744303 + T 100 -18.2 -2.66326 | opp_overlap 3744278, overlap 3744278 3744277 AGGCGTTGTAATAGG GCGCCGGATG GCAT CATCCGGCGC TACGTTTCACGTTAC yhjG 3746375 - 3744315 - | hypothetical protein TERM 4939 3744446 - 3744477 + g 95 -10.1 -4.70659 | gap 1, opp_overlap 3744449 CCGCGCCGCGCGCAA TCAGCGGGCCGGGC TTGAC GCCC-GCCTGCGGA TTTTTAAATGTCCCG yhjH 3747252 - 3746485 - | EAL domain-containing protein TERM 4940 3747553 - 3747535 - g 73 -8.8 -3.86015 | opp_overlap 3747537 3747541, overlap 3747536 GAGCTGTCGCAGAAA GGCGCTGA TGT TCAGCGCG GCTTCGGCGGCGACA TERM 4941 3747552 - 3747536 - g 75 -12.3 -2.91395 | opp_overlap 3747537 3747541, overlap 3747535 AGCTGTCGCAGAAAG GCGCTGA TGT TCAGCGC GGCTTCGGCGGCGAC kdgK 3747481 - 3748410 + | ketodeoxygluconokinase TERM 4942 3748434 - 3748463 + T 74 -10.7 -3.25823 | gap 1, overlap 3748449 CTCTTGCCCGGTGGC GCTG-CGCTTACCG GGC CGGCAGGCGGCAGC TTACTGTGCCGCCGG yhjJ 3749951 - 3748464 - | putative Zn-dependent peptidase TERM 4943 3750006 - 3749986 - R 78 -5.3 -5.06414 | TCCTGGTAATAAAAA GACAGCCCC GGC AGGGATGCC TGAATATGACGTAAA TERM 4944 3750158 - 3750129 - R 75 -10 -3.59315 | overlap 3750131 TCAATTATGCGCAAA CACCCGCAGTCC TGGAAG GGACTACGGGCA TAAGTGGCGAGATTA TERM 4945 3750156 - 3750131 - R 85 -12.6 -3.37259 | overlap 3750129 AATTATGCGCAAACA CCCGCAGTCC TGGAAG GGACTACGGG CATAAGTGGCGAGAT dctA 3751457 - 3750171 - | C4-dicarboxylate transporter DctA TERM 4946 3751593 - 3751610 + r 79 -2.6 -5.28315 | overlap 3751592 3751595 AAAAAGTTTGAGCTG GCTCGC ACAAGC GCGACC TTTTTTAACTTTTGT yhjK 3753588 - 3751615 - | putative phosphodiesterase TERM 4947 3752884 - 3752906 + g 86 -12 -3.79519 | opp_overlap 3752883 3752884 GGGCAACTCGGAAAC CGGAAAACGC ATC GCGTTGTCCG TTTGCTCCTCGCGTT TERM 4948 3752906 - 3752884 - G 72 -12 -2.76261 | opp_overlap 3752884, overlap 3752883 GGGCAACTCGGAAAC CGGAAAACGC ATC GCGTTGTCCG TTTGCTCCTCGCGTT TERM 4949 3753595 - 3753555 - G 81 -2 -5.28983 | gap 1, overlap 3753561 3753564 TGCAAAAGACAAAAA CAAACACCATGACAACGGC CGCA ACCATTGCCATC-TGTTTA ATTGTTAACGAGCGG yhjL 3757337 - 3753795 - | cellulose synthase subunit BcsC TERM 4950 3755411 - 3755395 - G 71 -10.8 -3.30338 | opp_overlap 3755394 3755395 AGAACGGCGTCATAA GCGGCG CGGGC CGCCGC ATTATCGCCACGCTG TERM 4951 3756607 - 3756653 + g 77 -8.1 -4.07568 | gap 2 TTTATCTGCTGGTAC CAGATGGCGGAGGCCGCGCTGCG TCC CGTA-C-TGGATTTCGCCATCTG TTTTAGCACCGCGAA SC3551 3757615 - 3757319 - | endo-1,4-D-glucanase TERM 4952 3757580 - 3757592 + g 81 -6.9 -4.81083 | opp_overlap 3757569 GACATCCACTTTCTC CGGTG GAA CGCCG TTTTTCATCGTTAAC TERM 4953 3758291 - 3758242 - g 88 -11.3 -4.10007 | opp_overlap 3758242 3758286, overlap 3758243 AGAAGTTCGCGAAAA CGGCGGTATGCAGAGCGAACTGA TGAA CCAGTCCGGCCTGCCAACCGCCC TGCTGTCATTCGACG TERM 4954 3758290 - 3758243 - g 91 -14.8 -3.05522 | opp_overlap 3758242 3758286, overlap 3758242 GAAGTTCGCGAAAAC GGCGGTATGCAGAGCGAACTGA TGAA CCAGTCCGGCCTGCCAACCGCC CTGCTGTCATTCGAC TERM 4955 3758467 - 3758445 - g 81 -8.5 -4.25104 | gap 1, opp_overlap 3758430, overlap 3758460 CCGGCGTCAGCAAAA CG-GCGGATT ATAA AATCCGCGCG CAGAAACTGTTCGAT yhjU 3757646 - 3758905 + | hypothetical protein TERM 4956 3758946 - 3758907 - T 100 -18.6 -3.73775 | opp_overlap 3758915 3758932, overlap 3758915 CTTACCCGCAGTAAA CCGAAAAAGGCCGCAAGG TTTC CCCTGCGGCCTGGTTCGG GCGCATGTTGCCATT TERM 4957 3758915 - 3758938 + T 83 -13.8 -2.71144 | opp_overlap 3758907 3758915, overlap 3758932 CAGTAAACCGAAAAA GGCCGCAAGG TTTC CCCTGCGGCC TGGTTCGGGCGCATG TERM 4958 3758938 - 3758915 - T 100 -16 -4.82855 | opp_overlap 3758915 3758932, overlap 3758907 CAGTAAACCGAAAAA GGCCGCAAGG TTTC CCCTGCGGCC TGGTTCGGGCGCATG SC3553 3759118 - 3758987 - | hypothetical protein TERM 4959 3759159 - 3759201 + H 100 -12.7 -4.60797 | gap 1, opp_overlap 3759158 TGAGGTTCAAGTTAG CCCCCGTCAGGTTGCCAGGT TTAT ACCAGTCAACGTG-CGGGGG TTTTCTCTATCCAGC SC3554 3759222 - 3759377 + | hypothetical protein SC3555 3759468 - 3759608 + | cystathionine gamma-synthase TERM 4960 3759673 - 3759707 + F 71 -7.2 -4.07568 | opp_overlap 3759661 3759666 GCACTATAGCCTGGT TATAGGCAGCATTCTT TAT GAGAGAGCTGCGTATA TTTTGGGCAGGGGGC TERM 4961 3760132 - 3760150 + G 75 -11 -3.37755 | opp_overlap 3760131 3760130, overlap 3760130 CCTATATCAAAACCT TCGGCCTT ACT GAGGCCGA TCTTTCACAGTCTAT yhjV 3759690 - 3761024 + | HAAAP family transport protein dppF 3762138 - 3761125 - | dipeptide transporter ATP-binding subunit dppD 3763118 - 3762135 - | dipeptide transporter ATP-binding subunit dppC 3764031 - 3763129 - | dipeptide transporter TERM 4962 3763549 - 3763525 - G 71 -8.5 -3.87815 | CGGCAGCGCCACAAA CGTCAACGCCA GCG CAGCGTTGCCG ATGGAGGGGCCGAAG dppB 3765060 - 3764041 - | dipeptide transporter permease DppB TERM 4963 3765198 - 3765210 + r 80 -6.9 -4.56133 | GCCTACACAACACCG GGGCG CAG CGCTC TTTTAATTATTCGAC dppA 3766824 - 3765217 - | peptide ABC transporter permease TERM 4964 3765970 - 3765982 + g 90 -6.3 -5.23765 | overlap 3765963 3765960 3765959 CAGGCCAGCCTGCTC CATCA GGT TGATG TTTTTATCTTCTTTC TERM 4965 3766432 - 3766444 + g 74 -3.3 -4.84359 | AGACACTTTATGGTA CGGGT TCT GCTCG TTTTTCTGCCGGTCA TERM 4966 3766596 - 3766619 + g 84 -8.8 -4.27316 | opp_overlap 3766593 3766595 ACTTCTCAGCAAGAC CCGGGATCAC TTCC GTGGTGCCGG TTTTGAATTCAACCA TERM 4967 3767365 - 3767345 - R 95 -12.6 -4.00411 | CAAAATTGTAAATAA GTAGGCCG TCGTG CGGCCTAC CGCGATCACAAAAAC pucJ 3768705 - 3767380 - | putative xanthine permease TERM 4968 3768008 - 3767997 - G 83 -5.8 -4.84527 | CGGAGAGATCAAAAA TCGG CCAG CCGA ACGGCAAAAGCTGTG TERM 4969 3768734 - 3768760 + r 75 -9.5 -3.54488 | gap 1, opp_overlap 3768734 3768737, overlap 3768732 3768735 3768737 AAAACATCAAAAAAA TA-ACCGCCAGC GCGG GCTGGCGGTCTG TATTATTTCAACCAA TERM 4970 3768759 - 3768734 - R 100 -11.1 -5.69023 | opp_overlap 3768734 3768732 3768735 3768737, overlap 3768737 AAAACATCAAAAAAA TAACCGCCAGC GCGG GCTGGCGGTCT GTATTATTTCAACCA TERM 4971 3768735 - 3768758 + r 85 -12.4 -3.34652 | opp_overlap 3768734 3768737, overlap 3768734 3768732 3768737 AAACATCAAAAAAAT AACCGCCAGC GCGG GCTGGCGGTC TGTATTATTTCAACC TERM 4972 3768756 - 3768737 - R 100 -15 -4.86226 | opp_overlap 3768737 3768735 3768734 3768732, overlap 3768734 ACATCAAAAAAATAA CCGCCAGC GCGG GCTGGCGG TCTGTATTATTTCAA TERM 4973 3768737 - 3768756 + r 100 -15 -3.23555 | opp_overlap 3768734 3768737, overlap 3768735 3768734 3768732 ACATCAAAAAAATAA CCGCCAGC GCGG GCTGGCGG TCTGTATTATTTCAA SC3563 3769887 - 3768763 - | PQQ repeat-containing protein TERM 4974 3769762 - 3769775 + g 71 -9.5 -3.53012 | opp_overlap 3769761 3769762 GTCCACCAGGTAAAC CCGCC CTTC GGCGG TTTGCGGCGCAAAAA SC3564 3770087 - 3769875 - | hypothetical protein SC3565 3769909 - 3770070 + | hypothetical protein TERM 4975 3770357 - 3770346 - gTR 75 -5.8 -4.56775 | opp_overlap 3770346 3770345 ATGGCGCTGGAAAAA CAGC ATGC GCTG ATTCTGGTGCCGCCG TERM 4976 3770803 - 3770815 + GTr 87 -10.5 -4.07568 | ACACCTTTGCCAGCG GCGCG GTA CGCGC TTTTCAGGAACAAGA TERM 4977 3770868 - 3770851 - gTR 74 -6.9 -4.19678 | opp_overlap 3770852, overlap 3770852 CCATACCTGAACAAA TGCGGGT GGTC ACCCGCT ATGATGGTATCCGCG TERM 4978 3770867 - 3770852 - gTR 73 -10.4 -3.11325 | opp_overlap 3770852, overlap 3770851 CATACCTGAACAAAT GCGGGT GGTC ACCCGC TATGATGGTATCCGC TERM 4979 3770852 - 3770867 + GTr 72 -10.4 -2.84634 | opp_overlap 3770851 3770852 CATACCTGAACAAAT GCGGGT GGTC ACCCGC TATGATGGTATCCGC TERM 4980 3770916 - 3770892 - gTR 79 -12.1 -3.14211 | ATCCGCGCGCACGAA TCGCTGCCGCC GCT GACGGCAGTGA ATATGCATCTTGATG celR 3770037 - 3771044 + | LacI family regulatory protein TERM 4981 3771070 - 3771085 + Tr 72 -9 -3.55368 | CTTGCCACTGCGGGC CGTTGC TGAC GCAACG TTCTCTCGCTTCGCT TERM 4982 3771161 - 3771179 + Tr 79 -8.8 -4.03204 | opp_overlap 3771162, overlap 3771162 TCAGATACAAAAAAA ACCTGCTC GCT GAGCAGGG TTTCTGAATTTGGTC TERM 4983 3771162 - 3771178 + Tr 80 -12.3 -3.01199 | opp_overlap 3771162, overlap 3771161 CAGATACAAAAAAAA CCTGCTC GCT GAGCAGG GTTTCTGAATTTGGT TERM 4984 3771178 - 3771162 - TR 100 -12.3 -6.06529 | opp_overlap 3771162 3771161 CAGATACAAAAAAAA CCTGCTC GCT GAGCAGG GTTTCTGAATTTGGT yhjW 3773048 - 3771357 - | phosphoethanolamine transferase TERM 4985 3773258 - 3773241 - R 100 -12.7 -4.49644 | opp_overlap 3773252 ACTAAAAATGGAAAA GGGCCAG CGAA CTGGCCC TCAGTGATTATTCGT lpfE 3773793 - 3773266 - | long polar fimbrial minor protein lpfD 3774878 - 3773799 - | long polar fimbrial operon protein lpfB 3778145 - 3777447 - | long polar fimbrial chaperone TERM 4986 3777566 - 3777580 + g 80 -4.2 -5.1287 | overlap 3777568 TCAATGAGCCTTTTG CCGGAA CCA TTCCCG TTTTTTCAATATCAC TERM 4987 3777754 - 3777774 + g 86 -7.5 -4.74103 | AGTTTTAAGCGGGTA CGTACGGCG ATC TGCAGTACG TTTTTAGCTTCCGCG TERM 4988 3778177 - 3778199 + r 93 -14.2 -3.60094 | opp_overlap 3778177, overlap 3778171 CTCCGCTGGAAAAAA TGGCAACGGG ATT TCCGTTGCCA TTATGATTGTCTGTA TERM 4989 3778199 - 3778177 - R 100 -13.5 -5.00616 | opp_overlap 3778171 3778177 CTCCGCTGGAAAAAA TGGCAACGG GATTT CCGTTGCCA TTATGATTGTCTGTA lpfA 3778766 - 3778230 - | long polar fimbria TERM 4990 3778263 - 3778289 + g 87 -8 -4.63932 | overlap 3778259 3778265 GAAGTCCACTTCTGC GTTACCGTAACC AGT GGTTACAGTATC TTTTGTTGCAACGTA TERM 4991 3778265 - 3778287 + g 76 -9.2 -3.93367 | overlap 3778259 3778263 AGTCCACTTCTGCGT TACCGTAACC AGT GGTTACAGTA TCTTTTGTTGCAACG TERM 4992 3779091 - 3779073 - R 100 -5.9 -6.23545 | overlap 3779075 GCTAAATAAAAAAAA GGGCACC AAATG GGTGCGC TGTACGCCTGGTGTT yhjX 3779218 - 3779114 - | hypothetical protein yhjY 3779976 - 3779272 - | hypothetical protein TERM 4993 3779934 - 3779911 - G 100 -8 -5.28176 | overlap 3779914 3779925 3779926 GGTATTGATAAAAAA CGAGCAGGCC ATAA GGCCCGCCAG ACAACGCAATGTCCG TERM 4994 3779931 - 3779914 - G 73 -10.5 -3.45403 | overlap 3779911 3779925 3779926 ATTGATAAAAAACGA GCAGGCC ATAA GGCCCGC CAGACAACGCAATGT TERM 4995 3780455 - 3780473 + G 78 -6.6 -4.59027 | opp_overlap 3780456, overlap 3780456 TTGCGATGGAGCAAA ACGGCGAG TCT TTCGCCGA TTTTGTCTGGTCATT TERM 4996 3780472 - 3780456 - g 84 -9.4 -4.2828 | opp_overlap 3780455 3780456 TGCGATGGAGCAAAA CGGCGA GTCTT TCGCCG ATTTTGTCTGGTCAT TERM 4997 3780456 - 3780472 + G 70 -10.1 -3.34332 | opp_overlap 3780456, overlap 3780455 TGCGATGGAGCAAAA CGGCGAG TCT TTCGCCG ATTTTGTCTGGTCAT tag 3780133 - 3780714 + | 3-methyl-adenine DNA glycosylase I yiaC 3780692 - 3781132 + | hypothetical protein SC3576 3783434 - 3781101 - | biotin sulfoxide reductase yiaD 3783587 - 3784249 + | putative outer membrane lipoprotein TERM 4998 3784424 - 3784446 + F 77 -6.9 -4.54727 | TAATAAGCCTGTTCC GGTTGGCGC ATGCC GCGCTTACC TTTTGATTTACGGAG TERM 4999 3784677 - 3784658 - g 82 -5.6 -5.00616 | gap 1, overlap 3784659 CGCTGCTGGAAAAAA TGCCG-GCG CTA CGCGCGGCG TCAACCATCTCGGTG yiaE 3784468 - 3785442 + | 2-hydroxyacid dehydrogenase yiaF 3786202 - 3785492 - | hypothetical protein TERM 5000 3785714 - 3785686 - G 70 -9.6 -3.34517 | gap 1, opp_overlap 3785691, overlap 3785684 ACTGCTGCGTAAAGA TCTGC-GCCGCCG GGAT CAGCGGCTGCAAA GCATCTGCCGGCACG TERM 5001 3786416 - 3786394 - H 79 -4.1 -5.252 | gap 1 CACTGCGATAAAAAA CGC-GGCAAG AAAG CTTTCCAGCG GGGGATGTAATATTT yiaG 3786641 - 3786931 + | putative transcriptional regulator TERM 5002 3786925 - 3786941 + F 70 -5.1 -4.45168 | opp_overlap 3786924 AAGTAAGCAATTGAT GGAGTAA TTT TTACCCC TTTCTGTTTTAACGG TERM 5003 3786954 - 3786972 + F 87 -10.3 -4.07687 | CCCTTTCTGTTTTAA CGGTCCT GCGTA AGGACCG TTTTCCCCGCCCGAT cspA 3787219 - 3787431 + | major cold shock protein TERM 5004 3787456 - 3787475 + F 100 -11.4 -6.09888 | GCTCAGAATTTTGAA TCCCTGCC TGAT GGCGGGGA TTTTTTTTATTCCAA SC3582 3787605 - 3788144 + | hypothetical protein TERM 5005 3788178 - 3788150 - f 100 -8.9 -5.44721 | opp_overlap 3788152, overlap 3788151 ATTACGTTAAAAAAA TGCCCGATAAC ATAATGG GTTATCGGGCC TATAAAACGCCAACA TERM 5006 3788177 - 3788151 - f 95 -12.4 -3.85748 | opp_overlap 3788152, overlap 3788150 TTACGTTAAAAAAAT GCCCGATAAC ATAATGG GTTATCGGGC CTATAAAACGCCAAC TERM 5007 3788307 - 3788329 + F 93 -7 -5.76237 | opp_overlap 3788307 GAGGCATCAGCGAAA GAGTCCATTT AAT ACATGGGCTC TTTTTTGTTTCTGTG SC3583 3788396 - 3788797 + | putative cytoplasmic protein TERM 5008 3789619 - 3789583 - g 100 -16.1 -3.54741 | opp_overlap 3789590, overlap 3789585 3789590 CACCAGGCCCTGAAA TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA GACAAAAAACTGTCA TERM 5009 3789617 - 3789585 - g 100 -16.5 -3.35046 | opp_overlap 3789590, overlap 3789583 3789590 CCAGGCCCTGAAATA CAAAACGCCCGATGA TGT TCATCAGGCGTTTTA CAGACAAAAAACTGT TERM 5010 3789590 - 3789612 + G 91 -12 -4.07568 | opp_overlap 3789585 3789583 3789590 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA TERM 5011 3789612 - 3789590 - g 100 -14.2 -4.78848 | opp_overlap 3789590, overlap 3789585 3789583 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA yis2 3788968 - 3789651 + | putative integrase protein SC3585 3790315 - 3789830 - | putative acetyltransferase SC3586 3790590 - 3790303 - | putative cytoplasmic protein yafP 3791235 - 3790768 - | putative acetyltransferase insK 3791598 - 3791407 - | putative transposase insK for insertion sequence e TERM 5012 3791802 - 3791812 + r 80 -6.8 -4.63479 | AGAGATCAATAATGG GTGC AAT GCAC TTTTGATTTATAGTC tnp 3793239 - 3792031 - | transposase of Tn10 TERM 5013 3793363 - 3793390 + r 77 -7.1 -4.46112 | opp_overlap 3793369, overlap 3793369 ACTATTTATGTTATA AAAAAACCTGC CCGAGA GCAGGTTTTTG TTTATTTAACTGAAC TERM 5014 3793384 - 3793369 - R 91 -6.8 -5.626 | opp_overlap 3793363 3793369 TATGTTATAAAAAAA CCTGCC CGAG AGCAGG TTTTTGTTTATTTAA TERM 5015 3793369 - 3793384 + r 91 -6.1 -5.5454 | opp_overlap 3793369, overlap 3793363 TATGTTATAAAAAAA CCTGC CCGAGA GCAGG TTTTTGTTTATTTAA glyS 3795477 - 3793408 - | glycyl-tRNA synthetase subunit beta TERM 5016 3794918 - 3794908 - G 71 -8.2 -3.91897 | CGGCTCACCCATAAA GCGG TGG CCGC GAATGACGCGGTCAG glyQ 3796398 - 3795487 - | glycyl-tRNA synthetase subunit alpha TERM 5017 3795664 - 3795714 + g 74 -4.5 -4.78107 | gap 1, overlap 3795693 3795696 TTTCAGAATACGCTC GTAGGCCGGCAGCGGCAGCGGGTT TTCC AGCGC-CAGCAGCTGCTGGGCTTC TTTTTCATACTGCTC TERM 5018 3795693 - 3795711 + g 75 -6.7 -4.49314 | gap 1, overlap 3795664 3795696 GCAGCGGGTTTTCCA GCGCCAGC AGCT GCTGG-GC TTCTTTTTCATACTG TERM 5019 3796585 - 3796561 - R 82 -7.1 -4.7889 | AGAAAGATGTAAAAA CTGCCCATCTG CAT CAAAAGAGCAG ACAAAACTCTCTTTA SC3592 3796839 - 3796537 - | putative outer membrane lipoprotein TERM 5020 3797212 - 3797228 + G 80 -4.4 -5.1287 | gap 1, overlap 3797210 TTTTTTGGCGAGCGC TG-CGCG CAAC CGCGGCA TTTTTTACGTATCGC yiaH 3797005 - 3798000 + | putative inner membrane protein TERM 5021 3798025 - 3798008 - T 75 -9.9 -3.61609 | opp_overlap 3798008, overlap 3798002 TTAGCTAAACGACAA TGATGGC TCCG GCCATCA TTCATCATCACTGTA TERM 5022 3798008 - 3798025 + T 71 -9.9 -3.22774 | opp_overlap 3798008 3798002 TTAGCTAAACGACAA TGATGGC TCCG GCCATCA TTCATCATCACTGTA yiaB 3798376 - 3798023 - | hypothetical protein TERM 5023 3798518 - 3798543 + r 82 -12 -3.45054 | opp_overlap 3798518 AATATTTACGGGAAA TGCCTTTCAG CCAAAA CTGAAAGGCA TTCTGACTTATGACA TERM 5024 3798543 - 3798518 - R 88 -12.7 -3.61922 | opp_overlap 3798518 AATATTTACGGGAAA TGCCTTTCAGC CAAA ACTGAAAGGCA TTCTGACTTATGACA xylB 3800005 - 3798551 - | xylulokinase TERM 5025 3799225 - 3799211 - G 82 -11.4 -3.91897 | CGGTTTACTCAGAAA GCCGTC GCT GACGGC AAAATAGACGCCCGA xylA 3801427 - 3800105 - | xylose isomerase TERM 5026 3800312 - 3800322 + g 70 -6.8 -4.07568 | opp_overlap 3800311 GCCGTCTTCAACCAT TCGC GCG GCGA TTTTCAGCGACAACG xylR 3801790 - 3802968 + | xylose operon regulatory protein bax 3803853 - 3803029 - | hypothetical protein TERM 5027 3804404 - 3804416 + GH 77 -6.9 -4.42806 | CCTGCGAAGGCGCGC CGCCG CAA TGGCG TTTGTTTAAAGATGG malS 3804169 - 3804891 + | alpha-amylase lyxK 3804768 - 3804989 + | L-xylulose kinase, cryptic sgbH 3804986 - 3805648 + | 3-keto-L-gulonate-6-phosphate decarboxylase sgbU 3805641 - 3806501 + | putative L-xylulose 5-phosphate 3-epimerase yisR 3808166 - 3807351 - | AraC family regulatory protein TERM 5028 3807686 - 3807702 + g 71 -4.4 -4.53034 | gap 1 TCCAGGCCAGCGACA CGCC-AG CGAC CTCGGCG TTTTCATTCTGTCGG TERM 5029 3807758 - 3807783 + g 71 -6 -4.33105 | opp_overlap 3807759, overlap 3807759 3807761 TCAGCAGCACGATGA ACTCCAGCGC CGGGCT GCGCTGGTGC TTTTCCTGCTCGTTC TERM 5030 3807827 - 3807815 - G 75 -6.2 -4.60924 | overlap 3807816 TAAACTGGCGAAAAA GCGC AATCA GCGC CTGCGGATCGGCAAC TERM 5031 3807869 - 3807899 + g 74 -10.3 -3.60296 | opp_overlap 3807868 3807866 3807869 GCGGCACGGAAAGAT GCGTCAGCCAGCG CGGGT CGCTGTCCGGCGC TTTGACCTCAAAATG TERM 5032 3809131 - 3809117 - R 71 -3.4 -4.8083 | GAAGAGTACGAAAAA CGCGGC CAG ACCTCG TACTGGCATACCTAC aldB 3812097 - 3810559 - | aldehyde dehydrogenase B (lactaldehyde dehydrogenase) SC3605 3812266 - 3813147 + | putative transcriptional regulator TERM 5033 3813368 - 3813348 - T 89 -4.7 -5.69262 | opp_overlap 3813353, overlap 3813352 3813353 CCAGAAAAATAAAAA GCAACGCAA TAA TTGTATTGC TTCATTTGTTATTTA selB 3815245 - 3813395 - | selenocysteinyl-tRNA-specific translation factor TERM 5034 3813598 - 3813619 + g 74 -7.3 -4.13945 | CGAAAGCGACAATCC GATCGTTAC GATA GTACCGATC TTTTACGATCGCGGT selA 3816633 - 3815242 - | selenocysteine synthase yibF 3817340 - 3816732 - | putative glutathione S-transferase TERM 5035 3817554 - 3817539 - H 86 -4 -5.50723 | GCACCAAAATAAAAA TGTGAA ATAT CTCACA TAAAATGGCCTTTTA mtlA 3817816 - 3819732 + | PTS family, mannitol-specific enzyme IIABC components TERM 5036 3820334 - 3820320 - g 74 -10 -3.63744 | overlap 3820318 TCGCCTGTGAAAATA TGGTGC GCG GCACCA CGCAGCTGAAAGGCC TERM 5037 3821020 - 3821009 - g 86 -7.2 -4.68593 | overlap 3821010 CTGATTACCGAAAAA GGCC CGCA GGCC GCGCTGGCGCAAATT mtlD 3819938 - 3821101 + | mannitol-1-phosphate 5-dehydrogenase mtlR 3821098 - 3821688 + | mannitol repressor protein SC3612 3821907 - 3821698 - | hypothetical protein yibL 3822198 - 3822560 + | hypothetical protein TERM 5038 3823291 - 3823272 - g 76 -3.4 -4.99056 | opp_overlap 3823282, overlap 3823282 CAACACAACCAAAAA GGTCACCG AAGT CGTTGGCC GCGTTGAACGCAAAC TERM 5039 3823536 - 3823507 - g 81 -3.5 -5.14563 | gap 1, overlap 3823508 TGGGGTACGAAAAAA CCTTCCGAGGCAAA AGA TCTGCCTCGCT-GG AAACAACTCCTGCTC TERM 5040 3823631 - 3823621 - g 83 -8.2 -4.43012 | ACGCTAACATTAAAA GGCG TAT CGCC CAATAATCTTAAGTA SC3614 3823048 - 3823731 + | putative inner membrane lipoprotein dspP 3823775 - 3828115 + | putative inner membrane protein TERM 5041 3828143 - 3828165 + F 100 -16.4 -4.30448 | opp_overlap 3828143 ACTCCCGACATCAAA GGCAATGGCA TAA TGCCATTGCC TTTTCACTTCCCTTT TERM 5042 3828165 - 3828143 - f 100 -16.4 -3.83205 | opp_overlap 3828143 ACTCCCGACATCAAA GGCAATGGCA TAA TGCCATTGCC TTTTCACTTCCCTTT lldP 3828414 - 3830069 + | L-lactate permease lldR 3830066 - 3830773 + | DNA-binding transcriptional repressor LldR lldD 3830839 - 3832029 + | L-lactate dehydrogenase yibK 3832094 - 3832567 + | putative tRNA/rRNA methyltransferase YibK lacI 3833690 - 3832635 - | putative transcriptional regulator TERM 5043 3833116 - 3833129 + g 72 -3.8 -4.72272 | AGAAGATACTCCCCC GTCG CCTGCC CGAC TTTTTCATGGGAAAA yin 3833958 - 3835154 + | mandelate racemase/muconate lactonizing family protein TERM 5044 3835162 - 3835180 + T 79 -11.7 -3.1352 | overlap 3835158 GCCCTTAACCCGACT GGCGGGA ATCCG TCCCGCC TCTCTTACCTTACAG TERM 5045 3836565 - 3836598 + T 100 -8.3 -5.32944 | gap 2 GCGAATTCTTCGCTC CGCTGTTCCG--GGA TTGCAC TCCATCGGAACAGCG TTTTTTAGTTGTACC cysE 3837442 - 3836621 - | serine acetyltransferase TERM 5046 3837467 - 3837496 + r 84 -10.8 -3.86194 | gap 1, opp_overlap 3837467 3837470 CAGACGGGCAGAAAA CGA-CCAACCCGT TCTGT GCGGGTTGGGTCG TTTATGCAAACAGTT TERM 5047 3837496 - 3837467 - R 90 -10.1 -4.39426 | gap 1, opp_overlap 3837467, overlap 3837470 CAGACGGGCAGAAAA CGA-CCAACCCG TTCTGTG CGGGTTGGGTCG TTTATGCAAACAGTT TERM 5048 3837492 - 3837470 - R 74 -10.6 -3.17598 | opp_overlap 3837467, overlap 3837467 ACGGGCAGAAAACGA CCAACCCG TTCTGTG CGGGTTGG GTCGTTTATGCAAAC gpsA 3838539 - 3837520 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 5049 3838537 - 3838553 + g 76 -10.9 -3.69283 | overlap 3838548 CGCATTACTTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 3839006 - 3838539 - | preprotein translocase subunit SecB grxC 3839301 - 3839050 - | glutaredoxin 3 yibN 3839818 - 3839387 - | putative rhodanese-related sulfurtransferase TERM 5050 3839558 - 3839572 + g 83 -10 -4.08485 | GTGCTTTTCCAGTTC GCCAAC ATT GTTGGC TTTGATTTCGCTCGG TERM 5051 3840584 - 3840611 + G 71 -11.2 -2.95476 | gap 1, opp_overlap 3840572 3840582 3840583 3840601, overlap 3840601 ATTCGAAGACAAATT CGCCGCGCAGGGC AAA GGCC-GCGTGGCG TCTATCGTCGGTCGT pmgI 3840066 - 3841610 + | phosphoglyceromutase TERM 5052 3841692 - 3841718 + G 100 -14.5 -3.81022 | overlap 3841713 GTCAGGCCTTTGTTC TACGCCAGCGT ACTTA GCGCTGGCGTA TTGTTGTGCGCCTTT TERM 5053 3842818 - 3842841 + G 73 -5.9 -4.43877 | opp_overlap 3842796 CCCTTGTGGGCAGTA GCGGCGGTC AGGGCA GACCCTCGC TTTATTTCGAAATTC yibP 3841620 - 3842903 + | hypothetical protein TERM 5054 3843039 - 3843029 - g 74 -6.8 -4.2349 | overlap 3843032 CCCGCATACGGAAAA CCAG GTT CTGG CGCTGCCGCCAAACA TERM 5055 3843735 - 3843723 - g 76 -3.3 -5.09426 | TGCAAGCCGAAAAAA CCGCT GCA ACCGG TCTACGCTACGCGCT yigQ 3842907 - 3843869 + | hypothetical protein yibD 3844818 - 3843856 - | putative glycosyl transferase TERM 5056 3844635 - 3844621 - G 71 -7.8 -3.92075 | opp_overlap 3844622 ATCGGCATCGACAAA GGCGAC ATA ATCGCC GGTCGCTGCTTGCAG TERM 5057 3845108 - 3845128 + r 71 -6.8 -4.13767 | opp_overlap 3845108 TTCCCTAACAAACAA GGTTGGCG AATGA CACCAACC TTTTACGATGACACG TERM 5058 3845128 - 3845108 - R 83 -9 -4.20367 | opp_overlap 3845108 TTCCCTAACAAACAA GGTTGGCG AATGA CACCAACC TTTTACGATGACACG TERM 5059 3845172 - 3845151 - R 81 -13.1 -2.65993 | opp_overlap 3845142 3845140 3845151 3845153, overlap 3845153 ATGACACGTATATCA GACCCGATA AAAT TATCGGGTC TCTATACATATTAAT TERM 5060 3845151 - 3845172 + r 82 -13.1 -2.95448 | opp_overlap 3845151 3845153, overlap 3845142 3845140 3845153 ATGACACGTATATCA GACCCGATA AAAT TATCGGGTC TCTATACATATTAAT TERM 5061 3845153 - 3845170 + r 70 -9.9 -3.02626 | opp_overlap 3845153 3845151, overlap 3845151 3845142 3845140 GACACGTATATCAGA CCCGATA AAAT TATCGGG TCTCTATACATATTA tdh 3846208 - 3845183 - | L-threonine 3-dehydrogenase TERM 5062 3846031 - 3846048 + g 76 -2.7 -5.00884 | ATTCATGCCCCACGA CCATC GGAACCGG GATGG TTTTTTGCGACCAGT kbl 3847414 - 3846218 - | 2-amino-3-ketobutyrate coenzyme A ligase rfaD 3847617 - 3848549 + | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 5063 3848650 - 3848683 + G 70 -9.6 -3.34962 | gap 1, opp_overlap 3848653, overlap 3848653 TCCCCAGGCGATAAT CGACGTGATGGCGCC TGCCT GGTGCCGTC-CGTTG TTATCGCGTATGCCG TERM 5064 3849041 - 3849081 + G 100 -17.8 -3.3197 | opp_overlap 3849052, overlap 3849045 3849052 CAGCTCCAGGTTAGC GAGGGTGAAAAGTCGCTG ATGTG CAGCGACTTTTCACTATC TTCTGAACGTCCTCT TERM 5065 3849045 - 3849077 + G 100 -19.4 -3.17622 | opp_overlap 3849052, overlap 3849041 3849052 TCCAGGTTAGCGAGG GTGAAAAGTCGCTG ATGTG CAGCGACTTTTCAC TATCTTCTGAACGTC TERM 5066 3849070 - 3849052 - g 86 -10.3 -4.11692 | opp_overlap 3849045 3849041 3849052 TAGCGAGGGTGAAAA GTCGCTG ATGTG CAGCGAC TTTTCACTATCTTCT TERM 5067 3849052 - 3849070 + G 90 -10.3 -4.28977 | opp_overlap 3849052, overlap 3849045 3849041 TAGCGAGGGTGAAAA GTCGCTG ATGTG CAGCGAC TTTTCACTATCTTCT rfaF 3848552 - 3849598 + | ADP-heptose:LPS heptosyltransferase II rfaC 3849598 - 3850551 + | ADP-heptose:LPS heptosyl transferase I WaaL 3850591 - 3851805 + | hypothetical protein TERM 5068 3851841 - 3851812 - T 100 -13.7 -6.08563 | opp_overlap 3851812 AATAGATAAAAAAAA CGCGCTGATAC TTATTACG GTATCAGCGCG TTTTCCATCATCCGG TERM 5069 3851812 - 3851841 + T 100 -14.4 -4.21194 | opp_overlap 3851812 AATAGATAAAAAAAA CGCGCTGATACT TATTAC GGTATCAGCGCG TTTTCCATCATCCGG rfaK 3853008 - 3851863 - | putative hexose transferase, lipopolysaccharide core biosynthesis TERM 5070 3853086 - 3853068 - R 78 -5.3 -5.01422 | gap 1 TTATAGAAAAAGAAA TGCG-TGC CGAA GCAACGCA AAATAATGATTTATC rfaZ 3853917 - 3853108 - | lipopolysaccharide core biosynthesis protein TERM 5071 3853568 - 3853540 - G 75 -6 -4.57341 | AATTTTCTTTAAAAA GCCCCCTTTTTC TCGGC GATAAAAGGAGC GAATAATTAAACAGT rfaY 3854765 - 3854067 - | lipopolysaccharide core biosynthesis protein TERM 5072 3854535 - 3854562 + g 91 -3.6 -5.46698 | gap 1, opp_overlap 3854541 GTAGTAATCCCCTTT TACT-AACGATTT AAA AAAGCGTTCAGTA TTTTTTACTTTTGGG TERM 5073 3854708 - 3854739 + g 74 -2.3 -5.04265 | overlap 3854709 3854711 3854713 ATATCCCAATGTATT TTTCACCGTCTTT TTTGAC AAAGACGGTATAG TTTTTAATCTTTTTT rfaJ 3855798 - 3854788 - | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase TERM 5074 3855226 - 3855208 - G 77 -4.6 -4.93365 | opp_overlap 3855208 TGCCAGAAGTAAAAA TGCCTT TTCAGTT AAGGCA TTCTCTTTCCATAAT rfaI 3856829 - 3855816 - | UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase rfaB 3857914 - 3856835 - | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltrans ferase yibR 3858217 - 3857984 - | putative inner membrane protein rfaP 3859046 - 3858249 - | lipopolysaccharide core biosynthesis; phosphorylation of core heptose TERM 5075 3858353 - 3858335 - G 74 -7.4 -4.07687 | ATTCTTTTTGCAAAA TCTCTCGC AGG GGGAGAGA GAAATACTCACGCAT rfaG 3860163 - 3859039 - | glucosyltransferase I TERM 5076 3859410 - 3859397 - G 78 -2.3 -5.24129 | opp_overlap 3859408, overlap 3859398 CGTCCGGAGAAAAAA TGCAC ATTC GTGCC GACGCCGCTTCTTTC rfaQ 3861230 - 3860160 - | lipopolysaccharide core biosynthesis protein TERM 5077 3860186 - 3860206 + g 76 -3.3 -5.08824 | gap 1 TGTCCAAATCTATGG TGCGTGCC TCATGC GGCA-GCA TTTTTTCCGTCGCGG kdtA 3861639 - 3862916 + | 3-deoxy-D-manno-octulosonic-acid transferase coaD 3862925 - 3863404 + | phosphopantetheine adenylyltransferase mutM 3864240 - 3863431 - | formamidopyrimidine-DNA glycosylase TERM 5078 3863463 - 3863475 + g 73 -9.1 -3.91352 | opp_overlap 3863455 3863458, overlap 3863461 GGCAATAGAACGTCG CACGC TGT GCGTG TTTCGTTGCGACTAT TERM 5079 3864320 - 3864292 - R 86 -9 -4.38712 | gap 1, opp_overlap 3864293 3864299, overlap 3864299 GGGACGGCCAGAAAA CAAAAAACCCCGC CGAA GCGAGG-TTTTTG TTACATCAAAGCGAG TERM 5080 3864299 - 3864314 + r 82 -6 -5.10461 | opp_overlap 3864292 3864299, overlap 3864293 CCAGAAAACAAAAAA CCCCGC CGAA GCGAGG TTTTTGTTACATCAA TERM 5081 3864314 - 3864299 - R 100 -8.2 -5.86976 | opp_overlap 3864299 3864293, overlap 3864292 CCAGAAAACAAAAAA CCCCGC CGAA GCGAGG TTTTTGTTACATCAA rpmG 3864505 - 3864338 - | 50S ribosomal protein L33 rpmB 3864762 - 3864526 - | 50S ribosomal protein L28 TERM 5082 3864967 - 3864954 - R 72 -6.7 -4.2074 | overlap 3864957 TCCCGAACAGACAAA GATCC CGAT GGATC GCGCAAAGAATCTTA radC 3865645 - 3864980 - | DNA repair protein RadC TERM 5083 3866759 - 3866741 - g 71 -4.5 -4.67168 | gap 1, overlap 3866732 AAAAATGGTCAAAAA CCCGGACA TTGT CG-CCGGG GTGGCCGCACTCAGT dfp 3865821 - 3867041 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase dut 3867019 - 3867477 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 5084 3867510 - 3867530 + F 70 -9 -3.33492 | AACGTCATAATACTG CCGCAAGC GCTGA GTTTGCGG TTATAGCGTGGGTGC TERM 5085 3867860 - 3867833 - g 91 -4 -5.69023 | opp_overlap 3867833 3867839 AAAAGATGAAAAAAA CACCAGCACGCG TTTG CGCCTGATTGTG TTGCTGATTCTGGGT slmA 3867585 - 3868181 + | nucleoid occlusion protein TERM 5086 3868251 - 3868230 - T 80 -10.1 -3.93742 | overlap 3868241 GCGACAGAAACATAA GCCCGGTAA AGCG CCACCGGGC AATTCGCTTACACGC pyrE 3868900 - 3868259 - | orotate phosphoribosyltransferase TERM 5087 3868972 - 3868955 - R 100 -11.3 -5.96219 | TACGGACAAAAAAAA GGCGACT TTTC AGTCGCC TTAAAATCAATTTTC rph 3869695 - 3868979 - | ribonuclease PH TERM 5088 3870544 - 3870526 - g 85 -2.4 -5.45652 | gap 1, overlap 3870528 ATTCTGAAGAAAAAA GA-GGCG GTAGGT CGCCGTC TGGACTTCATGATGC yicC 3869821 - 3870684 + | hypothetical protein TERM 5089 3870703 - 3870732 + T 80 -10 -3.93695 | gap 1, opp_overlap 3870700 3870709 TGGCGCTCAATATGT CAC-AGAGCCCGC CTTAT GCGGGCTCTCGCG TTTATCCGTAGTACG TERM 5090 3870725 - 3870709 - T 72 -10.8 -2.91735 | opp_overlap 3870703, overlap 3870700 TCAATATGTCACAGA GCCCGC CTTAT GCGGGC TCTCGCGTTTATCCG nahR 3871636 - 3870734 - | LysR family transcriptional regulator TERM 5091 3871440 - 3871409 - G 70 -5.1 -4.50761 | ATTAAGCGAAACAAA CACAGGCGCCA ATTTGTCACG CAGCGCCTGCG CATAAGGCGTAGCAA SC3660 3871710 - 3872591 + | putative Zn-dependent hydrolase, including glyoxylases TERM 5092 3872608 - 3872626 + F 83 -8.8 -4.27465 | opp_overlap 3872598 3872597 3872600, overlap 3872606 GAAATGACTCACCGG CGGCGC GTCCGGG GCGCCG TTCTTTTAAATTATC yigC 3872842 - 3873459 + | hypothetical protein TERM 5093 3873478 - 3873505 + GT 84 -9.2 -4.3467 | opp_overlap 3873478, overlap 3873479 CCAAATCCGGGAATA TGCTGAGCAG CCAGCCAT CTGCTCAGCG TTTTGATCTGCGGAT TERM 5094 3873479 - 3873504 + GT 74 -10.5 -3.2032 | opp_overlap 3873478, overlap 3873478 CAAATCCGGGAATAT GCTGAGCAG CCAGCCAT CTGCTCAGC GTTTTGATCTGCGGA ligB 3875141 - 3873456 - | NAD-dependent DNA ligase LigB SC3663 3873477 - 3873602 + | hypothetical protein TERM 5095 3875453 - 3875465 + G 80 -9.1 -4.15044 | opp_overlap 3875449 3875453 GCGCGGGTAAATCCA GCCTG ATT CAGGC TTTATTAAAAACCCA TERM 5096 3875741 - 3875758 + G 85 -2.6 -5.45802 | opp_overlap 3875741 3875739 AAATTCGCGAAAAGA TGCCGC AAGCAC GCAGCA TTTTTATTTTGCCGC gmk 3875311 - 3876021 + | guanylate kinase TERM 5097 3876241 - 3876212 - g 72 -3.5 -4.71401 | gap 1, overlap 3876204 3876215 3876216 AAGAAAACGATAAAA CTACCGTTATCGCG CTG CGCGAAATCGA-AG AAGGTCTGATTAACA rpoZ 3876076 - 3876351 + | DNA-directed RNA polymerase subunit omega TERM 5098 3877570 - 3877592 + G 84 -9 -4.23758 | overlap 3877571 CGCATTGTCGAACTG CCCGCTGGCG CTA CGCCGGTGGA TTTTGCCTATGCAGT TERM 5099 3877571 - 3877591 + G 81 -12.5 -3.13773 | overlap 3877570 GCATTGTCGAACTGC CCGCTGGCG CTA CGCCGGTGG ATTTTGCCTATGCAG TERM 5100 3878017 - 3877989 - g 83 -7.3 -4.56775 | AGTGGTCGCGAAAAA TCTGCAGCAAGGC GAA GCCGTGGTGCCGA CCGTTGCGCAATCGA spoT 3876370 - 3878481 + | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 5101 3879046 - 3879032 - g 70 -10 -3.36273 | opp_overlap 3879032 TTGCCGGAAGATGAA CAGCAG CGC CTGCTG TTTGAGGGTGGTTAT TERM 5102 3879032 - 3879046 + G 71 -10 -3.59583 | opp_overlap 3879032 TTGCCGGAAGATGAA CAGCAG CGC CTGCTG TTTGAGGGTGGTTAT spoU 3878486 - 3879175 + | tRNA guanosine-2'-O-methyltransferase TERM 5103 3880010 - 3879985 - g 74 -10.3 -3.53012 | overlap 3879986 TCGTTGCCGTTTAAA CCCACCAGCGC GCAG GCGCGGGTGGT GGCAGAGATCGAACG TERM 5104 3880009 - 3879986 - g 79 -13.8 -2.71712 | overlap 3879985 CGTTGCCGTTTAAAC CCACCAGCGC GCAG GCGCGGGTGG TGGCAGAGATCGAAC recG 3879181 - 3881262 + | ATP-dependent DNA helicase RecG SC3669 3882116 - 3881265 - | putative cytoplasmic protein TERM 5105 3881576 - 3881554 - G 70 -6.9 -4.14397 | ACCGGATAAATTAAA TGCGCGGCG TACTG CAACGCGCA TACCGCTTTACCCGG gltS 3883324 - 3882119 - | GltS family glutamate transport protein TERM 5106 3882206 - 3882188 - G 70 -6.6 -4.10188 | overlap 3882189 GATATCGATAAAGAA CGCGCCGA CCA TCGGCACC ACCAGGAACGCCATA TERM 5107 3883973 - 3883987 + G 71 -7.8 -3.9398 | TGATGCTGGCAAGCT GCACCG AGA TGGTGC TTTCTCGCATTCTAC yicE 3883552 - 3884943 + | NCS2 family, purine/xanthine transport protein TERM 5108 3884980 - 3884947 - f 78 -5.8 -4.7657 | opp_overlap 3884954, overlap 3884948 3884949 GAAAAACCGTAAAAA CCCTGCGGCGGCGA CACGAT TCGCCGCTGCTGTA ACGCTCTTTCACCAT TERM 5109 3884978 - 3884949 - f 71 -10.6 -2.64962 | opp_overlap 3884954, overlap 3884948 3884947 AAAACCGTAAAAACC CTGCGGCGGCGA CACGAT TCGCCGCTGCTG TAACGCTCTTTCACC TERM 5110 3884954 - 3884973 + F 71 -10.7 -2.63479 | opp_overlap 3884949 3884948 3884947 CGTAAAAACCCTGCG GCGGCGA CACGAT TCGCCGC TGCTGTAACGCTCTT TERM 5111 3886234 - 3886205 - g 81 -12.9 -3.02511 | overlap 3886224 CCGACTGGTTGAACA GCCTGACGCTGAA AAAA TTCAGCGCCAGCC GCAATCTGGTGATCG yicH 3885064 - 3886773 + | hypothetical protein yicI 3889194 - 3886876 - | alpha-xylosidase YicI yicJ 3890591 - 3889206 - | putative transporter SC3675 3891348 - 3890842 - | putative transposase TERM 5112 3891825 - 3891806 - g 75 -6.4 -4.58395 | opp_overlap 3891806 GCGAGCGGTTAAAAA TATCTGCC AGGA GGCGGATA TTTCTGAAGTGACTG TERM 5113 3891806 - 3891825 + G 71 -8.6 -3.89822 | opp_overlap 3891806 GCGAGCGGTTAAAAA TATCTGCC AGGA GGCGGATA TTTCTGAAGTGACTG tnpA 3891729 - 3891887 + | transposase rmbA 3892596 - 3893213 + | putative cytoplasmic protein TERM 5114 3893961 - 3893939 - g 71 -4.8 -4.58395 | overlap 3893941 GTCACGTGCCAAAAA TACGATTGTC GTC GGCAATCGTG CACATATTGTTACTA TERM 5115 3894955 - 3894941 - g 83 -5.7 -4.84529 | opp_overlap 3894940 GCAGAAAGGTAAAAA CTGGT ATCTG ACCAG CTACATTGAGCCGGA misL 3893274 - 3896141 + | putative autotransported protein TERM 5116 3896180 - 3896154 - T 76 -9.4 -3.68569 | opp_overlap 3896158, overlap 3896156 3896158 TGATTCAGGTAACAA CAGAGCCGCTGA TCT TCAGCGGCTTTT ACCCGGAAGCGCTTT TERM 5117 3896178 - 3896156 - T 82 -12 -3.42256 | opp_overlap 3896158, overlap 3896154 3896158 ATTCAGGTAACAACA GAGCCGCTGA TCT TCAGCGGCTT TTACCCGGAAGCGCT TERM 5118 3896158 - 3896176 + T 100 -14.6 -4.07568 | opp_overlap 3896156 3896154 3896158 TCAGGTAACAACAGA GCCGCTGA TCT TCAGCGGC TTTTACCCGGAAGCG TERM 5119 3896176 - 3896158 - T 90 -14.6 -3.27902 | opp_overlap 3896158, overlap 3896156 3896154 TCAGGTAACAACAGA GCCGCTGA TCT TCAGCGGC TTTTACCCGGAAGCG TERM 5120 3896272 - 3896254 - T 100 -8.9 -4.9725 | ATGTGTACAGAAAAA TATCGGG CGTTT CCCGATA GTGAACATAAAACCA fidL 3896718 - 3896236 - | putative inner membrane protein marT 3897568 - 3896711 - | putative transcriptional regulatory protein TERM 5121 3896894 - 3896904 + g 71 -8.2 -3.77177 | opp_overlap 3896894 CTTATAGCTTGCAAA GCGG CTG CCGC TTTCGATATCTTCAT SC3681 3897734 - 3897621 - | putative cytoplasmic protein TERM 5122 3898053 - 3898025 - H 73 -10.6 -2.94912 | opp_overlap 3898024 3898032, overlap 3898032 CTCTTAATTGATATA TTTCAAACTTAT ACTAA ATAAGTTTGAAA CTATCTATCAGAAAC slsA 3898353 - 3899033 + | putative inner membrane protein TERM 5123 3899076 - 3899056 - T 93 -14.1 -3.57561 | opp_overlap 3899056 CCTGAAGCGGCTAAA TAGCCCCAT TTA ATGGGGCTA TTTTACTTGCCATTT TERM 5124 3899056 - 3899076 + T 100 -14.1 -4.43911 | opp_overlap 3899056 CCTGAAGCGGCTAAA TAGCCCCAT TTA ATGGGGCTA TTTTACTTGCCATTT cigR 3899741 - 3899262 - | putative inner membrane protein mgtB 3902782 - 3900056 - | Mg2+ transport protein TERM 5125 3902324 - 3902339 + g 73 -5.4 -4.57837 | opp_overlap 3902315, overlap 3902307 ACGCAACACCGTGGC GGTGGT GCGA ACCATC TTTTTCAGCGCCTGT TERM 5126 3902905 - 3902922 + r 77 -3.4 -5.18371 | AAAGGTTATTGCTTA CTCACT ATTTTG AGTGGG TTTTATTTTATCGAC mgtC 3903697 - 3903002 - | Mg2+ transport protein TERM 5127 3903573 - 3903553 - G 100 -8.2 -5.19328 | opp_overlap 3903558, overlap 3903554 AGCTCAGAATAAAAA CGGCGGCG CCTGT CGCCACCA GCGCATTAGTGCGTA TERM 5128 3903572 - 3903554 - G 74 -9.5 -3.70512 | opp_overlap 3903558, overlap 3903553 GCTCAGAATAAAAAC GGCGGCG CCTGT CGCCACC AGCGCATTAGTGCGT yicL 3904305 - 3905108 + | putative permease, integral membrane protein yfcI 3906080 - 3905151 - | putative cytoplasmic protein SC3688 3907059 - 3906316 - | putative cytoplasmic protein TERM 5129 3906812 - 3906828 + g 71 -7.9 -3.99324 | GCCGGGTGAGTATGG GCGGCAA TCA TCGCCGC TTTGTAGTACTGCGC TERM 5130 3907977 - 3907967 - R 72 -8.2 -3.74747 | overlap 3907968 TCAATCTCGACGAAA GCGG AAG CCGC GCGCGCGGTGGCCTG TERM 5131 3908029 - 3908056 + r 74 -5.6 -4.56775 | gap 1, opp_overlap 3908029, overlap 3908020 TGAGACGCCCAGAAT GGTCATT-TTGCC GCA GGCGTTAATGACC TTTTTCAACCCCAGT ptnD 3908958 - 3908098 - | putative phosphotransferase system enzyme II TERM 5132 3908644 - 3908654 + g 87 -2.4 -5.64873 | opp_overlap 3908629, overlap 3908643 CGAGTCGTTAATCGG CTCG CCG CGCG TTTTTTGTTCTTCCA ptpC 3909704 - 3908955 - | putative phosphotransferase system enzyme IIC ptfB 3910335 - 3909850 - | putative phosphotransferase system enzyme IIB TERM 5133 3909997 - 3909987 - G 87 -8.2 -4.62302 | opp_overlap 3909987 TAATATTCTGAAAAA CCGC CTT GCGG TTTGGCCCGCCGCCG SC3692 3910771 - 3910346 - | putative phosphotransferase system enzyme IIA TERM 5134 3910832 - 3910876 + r 72 -9.3 -3.55071 | gap 1, opp_overlap 3910873 3910874, overlap 3910831 TGCCCGGTGGCACTG CG-CTTACCGGGCCTACAGG ACACTC CCGGTAGGCCGGATAAGGCG TTTACGCCGCTATCC TERM 5135 3910977 - 3910957 - R 70 -5.3 -4.48713 | overlap 3910959 GCGAGGAAGAAGAAA GGTTTGGCG AGG CGCGAAGCC CCGCCAGTAAAAGGA levR 3913791 - 3910993 - | transcriptional regulator TERM 5136 3911348 - 3911338 - G 71 -8.2 -3.86015 | overlap 3911339 TAGCGCGCTGATAAA GCGC ATG GCGC TGCGCTCCATCTCCA TERM 5137 3911465 - 3911455 - G 75 -6.8 -4.46112 | overlap 3911462 3911463 TTCCAGCGAAATAAA CGGA ATA TCCG GCAGCCCCGGCTGGA TERM 5138 3912615 - 3912636 + g 71 -10.1 -3.59979 | overlap 3912602 3912601 3912599 ATGCGGGCAGCGTGC GCGCGTCTA TATT TAGCCGCGC TTTACCGTCAAACAG SC3694 3913988 - 3914281 + | putative inner membrane protein TERM 5139 3915741 - 3915723 - g 84 -3 -5.42259 | GCACGGTGAAAAAAA GCGGAGAA TGG TTTGCCGC CACCGCAGAGCATAA bglA 3914387 - 3915769 + | glycosyl hydrolase family protein TERM 5140 3917201 - 3917181 - f 72 -4.7 -4.67038 | opp_overlap 3917192, overlap 3917192 CGTGCAAAACCAAAA GGTAAGACA TAG TGTATCACC TGGTGCTATACTTTA SC3696 3917192 - 3917596 + | putative cytoplasmic protein TERM 5141 3917618 - 3917598 - g 84 -9.1 -4.35327 | TCAGCAAAAACTAAA TTCAAAAGC CCT GCCTTTGAA GCGATTCATAGCGCG SC3697 3917580 - 3917903 + | putative helix-turn-helix protein SC3698 3918088 - 3918867 + | hypothetical protein SC3699 3919218 - 3918895 - | hypothetical protein TERM 5142 3919068 - 3919099 + g 83 -14.6 -2.7186 | opp_overlap 3919059 CTATAATTTGCCTGT CCCGTTGTTGAAAT GAGC ACTTCAACAACGGG TAATTAAACAAATTT ptfA 3919487 - 3919218 - | putative phosphotransferase system, HPr-related protein TERM 5143 3919453 - 3919472 + g 74 -2.2 -5.01497 | gap 1 CGCGCATGAAGCCCC GTAC-TGTT CAT AACGCGTAC TTTTTGTCTAATCAT gatY 3920357 - 3919497 - | putative fructose-1,6-bisphosphate aldolase TERM 5144 3919881 - 3919900 + g 86 -10.8 -4.13945 | opp_overlap 3919879 CTCCTCAACAAAGCG CTGAACCT TCTC AGGTTCAG TTTTGCAGTCAGCCT xylB 3921904 - 3920420 - | putative sugar (pentulose and hexulose) kinase TERM 5145 3920858 - 3920812 - G 70 -3.4 -4.8048 | opp_overlap 3920816 CCGTCAGACCAAAAA GCAGGCCACGAGTGTGCCGATT TTT ATTTGGCGAACCCGAGCCCCGC AAATGAGGAATAAAT ptkC 3923255 - 3921897 - | putative PTS system galactitol-specific enzyme IIC component TERM 5146 3923201 - 3923174 - G 93 -4.7 -5.52986 | ATGCCAGGAAAAAAA GGACCAGCGGC AATAAA ACCGTTGGGCC AAACCCCAGGACATA ptkB 3923618 - 3923331 - | putative periplasmic protein SC3705 3924088 - 3923615 - | phosphotransferase system mannitol/fructose-specific IIA component farR 3924849 - 3924106 - | GntR family transcriptional regulator TERM 5147 3925007 - 3924969 - R 83 -9.8 -4.17762 | gap 1, opp_overlap 3924971, overlap 3924971 3924974 TAGTGTTCAAAACAA GATCA-CATTTCCGTGA TATATG TCACGGAAATGATGAGC TACAAGTCTCTGACG TERM 5148 3925005 - 3924971 - R 86 -11 -3.68435 | gap 1, opp_overlap 3924971, overlap 3924969 3924974 GTGTTCAAAACAAGA TCA-CATTTCCGTGA TATATG TCACGGAAATGATGA GCTACAAGTCTCTGA TERM 5149 3925001 - 3924974 - R 82 -12.9 -2.94356 | opp_overlap 3924971, overlap 3924971 3924969 TTCAAAACAAGATCA CATTTCCGTGA TATATG TCACGGAAATG ATGAGCTACAAGTCT yicN 3925660 - 3925202 - | hypothetical protein TERM 5150 3925339 - 3925354 + g 83 -7.5 -4.56597 | GTGTGTCGGTGATCG GCGCG GCTAAA CGCGC TTTTTGCAGCAAGCG TERM 5151 3925823 - 3925805 - R 100 -13.1 -5.31456 | overlap 3925794 3925789 GCAAGGCATAAAAAA GCCCGGC GTTAA GCCGGGC AAAACGTTACCAAAT uhpT 3927238 - 3925847 - | sugar phosphate antiporter TERM 5152 3926072 - 3926092 + g 76 -3.1 -5.08824 | opp_overlap 3926055, overlap 3926073 GAAGGTTCCTTTGAT ACCGTCCGC AGC GCCGATGGC TTTTTTCGGTACGAA TERM 5153 3927671 - 3927661 - R 71 -6.8 -4.15044 | CCGGTGGTGAAGAAA CAGG CCG CCTG CATCACGTAGCTGGC TERM 5154 3928293 - 3928239 - R 77 -11.3 -3.28712 | gap 1 CGCGGTGTTCCATAA CGCCCACCAGCCGCCGCGCTCGGTAC GCGA GTACCAGGCG-GTCAGCAAACGGGCG CAAACCGGCGATCCA TERM 5155 3928335 - 3928323 - R 71 -3.3 -4.86033 | AAACCCCTAGAAAAA GGCGT TCA ATGCC CATAGCAGCGCAAAG TERM 5156 3928446 - 3928423 - R 75 -6.7 -4.38712 | CCGATGCCCATAAAA TAGCGAGCG TTAGAG CGATCGCTA ACGATGCCGGAGACA uhpB 3930260 - 3928719 - | sensory histidine kinase UhpB uhpA 3930873 - 3930220 - | DNA-binding transcriptional activator UhpA TERM 5157 3930862 - 3930838 - GR 100 -12.2 -5.96219 | GATGGATAAAAAAAA CGCGCTTACC TTAAC GATAAGCGCG CGGCTGTTCAAGCCT vaaS 3931898 - 3930885 - | hypothetical protein TERM 5158 3931913 - 3931945 + r 73 -7.6 -4.05788 | TGGTTGATCTCCTCA GGACGCGGCGACTT CAGCC AGGTTGCCGCGCAC TTTGCTTTCGCGCCA fucP 3933226 - 3931910 - | putative L-fucose permease TERM 5159 3932968 - 3932982 + g 89 -2.8 -5.52384 | GGCCGATAAGTATCG CCACTT TAT AACTGG TTTTTTTAATGACCA TERM 5160 3933179 - 3933212 + g 77 -3.9 -4.99861 | gap 1, opp_overlap 3933174, overlap 3933180 3933199 3933208 CTGGAACAGAGGTGT C-TTATTCAGATACCC GTC GGGCATCTGAACGATG TTTTTATCGTTCATA TERM 5161 3933180 - 3933210 + g 74 -7.6 -4.11322 | opp_overlap 3933174, overlap 3933179 3933199 3933208 TGGAACAGAGGTGTC TTATTCAGATACCC GTC GGGCATCTGAACGA TGTTTTTATCGTTCA rbsK 3934177 - 3933257 - | ribokinase family sugar kinase TERM 5162 3933906 - 3933892 - G 74 -7 -4.25104 | overlap 3933893 TGGCGTTGACGAAAA TCGGCG CTA CGCCGC TGCTGGTACACGGTA TERM 5163 3933912 - 3933922 + g 80 -5.4 -4.88067 | GCTACGCCGCTGCTG GTAC ACG GTAC TTTTTCTACATACGT TERM 5164 3934236 - 3934221 - H 70 -4.8 -4.39889 | ACAATGATATTAAAA TAACAT TACC ATGTTA CTTCCGTATCATTTG TERM 5165 3935005 - 3935035 + G 74 -7.6 -4.14243 | opp_overlap 3935005 TCAATCCGCGCAAAG TGTTTATTTCCGCC AGC GGCGTACATGAACA TTTTGGCGTGAGCTG deoR 3934491 - 3935276 + | DeoR family transcriptional regulator ilvN 3935568 - 3935278 - | acetolactate synthase 1 regulatory subunit ilvB 3937260 - 3935572 - | acetolactate synthase catalytic subunit TERM 5166 3936672 - 3936690 + g 73 -5.2 -4.56597 | GGATACTCTCCGCGC TCAACTCC GGC GGGGGTGA TTTTTCCGCCGGCGA TERM 5167 3937316 - 3937340 + r 89 -11.4 -4.16279 | gap 1, opp_overlap 3937316 GTCTTAAACAAAAAA CCCCGCCCGGT TTGC GCCG-GCGGGG TTTTGGAATCGTGTG TERM 5168 3937340 - 3937316 - R 100 -10.7 -5.63517 | gap 1, opp_overlap 3937316 GTCTTAAACAAAAAA CCCCGCCCGG TTTGCG CCG-GCGGGG TTTTGGAATCGTGTG ivbL 3937465 - 3937367 - | ilvB operon leader peptide TERM 5169 3937694 - 3937679 - H 100 -10.4 -5.79595 | opp_overlap 3937679 CCTGAAAACAAAAAA CCTCGC CGAA GCGAGG TTCTTACAGCGTAAT TERM 5170 3937679 - 3937694 + H 79 -10.4 -3.62775 | opp_overlap 3937679 CCTGAAAACAAAAAA CCTCGC CGAA GCGAGG TTCTTACAGCGTAAT TERM 5171 3937779 - 3937760 - H 80 -12.2 -2.99188 | opp_overlap 3937758 3937757 3937775 3937776, overlap 3937755 3937749 3937776 AACAGCAGAAGTATA CGCGTTCT GTGC AGAACGCG CAATTTCGGCGCGAA SC3718 3938099 - 3938188 + | hypothetical protein TERM 5172 3938211 - 3938232 + F 100 -17.3 -3.69354 | opp_overlap 3938200 3938211 TCAAGCCGCACCGAA GGGGAGCGG GCAA CCGCTCCCC TTTCACCTTATCCGC TERM 5173 3938232 - 3938211 - f 100 -17.3 -3.06831 | opp_overlap 3938211, overlap 3938200 TCAAGCCGCACCGAA GGGGAGCGG GCAA CCGCTCCCC TTTCACCTTATCCGC TERM 5174 3939107 - 3939121 + G 77 -7.8 -4.3014 | TGGCGGCAGGCGGGA TTGCCC TCG GGGCGA TTTTACTCCGTCTGT SC3719 3938281 - 3939141 + | integral membrane protein TERM 5175 3939175 - 3939194 + TF 88 -7.8 -4.92385 | overlap 3939176 AGACGTAACACATTC TCGGCAAC ATTT GTTGCCGC TTTTGTTTACATATC TERM 5176 3939176 - 3939193 + TF 82 -11.3 -3.54346 | overlap 3939175 GACGTAACACATTCT CGGCAAC ATTT GTTGCCG CTTTTGTTTACATAT TERM 5177 3939965 - 3939948 - gT 72 -5.5 -4.42386 | opp_overlap 3939947 TCGCCAGCTATAAAA CGCTGTT TGGT AACGGCG CATTTAACTGTTACC TERM 5178 3940257 - 3940267 + GT 74 -2.4 -5.06414 | GGACGCTACTCATCC CCGC TGC GCTG TTTTTCTTCGGCGCC SC3721 3941489 - 3940455 - | hypothetical protein emrD 3939344 - 3940528 + | multidrug resistance protein D TERM 5179 3940538 - 3940558 + gT 100 -15.4 -3.66178 | GTTTAACGTTCCCCT CGCCCGGC TTTTT GCCGGGCG TTTCACATTCCGGCG TERM 5180 3940648 - 3940673 + gT 77 -3.9 -5.0538 | overlap 3940656 TAAAACTGAGTATCC GCGTTTATCGC ATAC GGGATATGCGC TTTTTTCAGCTCGCA TERM 5181 3940716 - 3940732 + gT 72 -2.2 -4.8667 | GGCAAACGCGAACTG TGAAGC GACCG GCGTCA TTTTTATCGACTCTC TERM 5182 3940912 - 3940930 + gT 72 -8.8 -3.53343 | overlap 3940924 AAGATGTGCCACTCC GCCAGTAC ATA GTTCTGGC TTTGCGCCGGCAGTT dsdC 3942542 - 3941604 - | DNA-binding transcriptional regulator DsdC TERM 5183 3941848 - 3941831 - G 74 -11.3 -3.19936 | opp_overlap 3941830 3941829 AACGATCGAAGCCAA TGCCGGA TGAA TCCGGCA AATTTACTGCAAAAT TERM 5184 3942191 - 3942156 - G 77 -11 -3.57971 | overlap 3942157 ATAGCGACGGGTAAA GTCCCCCAGCGCAGGC ACCA GCCAGCACTGGGCGAT AGAGGGACGTGAATA TERM 5185 3942190 - 3942157 - G 83 -14.5 -2.74461 | overlap 3942156 TAGCGACGGGTAAAG TCCCCCAGCGCAGGC ACCA GCCAGCACTGGGCGA TAGAGGGACGTGAAT TERM 5186 3942843 - 3942862 + G 75 -6.4 -4.55295 | AAATTCCACCCCTTC CTGGCG TTACTGCT CGCCAG TTTCTTTGTCGGCGC TERM 5187 3943440 - 3943421 - g 70 -7 -4.07687 | opp_overlap 3943429 AGTGCGCGCCGAAAA CACCCTGC CGTC GCTGGGCG CAACGCTGTTTACCG dsdX 3942753 - 3944090 + | permease DsdX TERM 5188 3944273 - 3944299 + G 71 -9.5 -3.53091 | gap 1, opp_overlap 3944297, overlap 3944254 3944268 CATGACCGTCTGGCG CGCTTTGCGCCG TATC TGGCG-AAAGCG TTTCCGCAAACCGCT TERM 5189 3944436 - 3944423 - g 81 -2.3 -5.40474 | ATGCTGTTAAAAAAA GACAG TCAC CTGGC AATCTCTGGTTCCAT dsdA 3944108 - 3945430 + | D-serine dehydratase TERM 5190 3945493 - 3945453 - T 82 -11.9 -3.35046 | gap 1, opp_overlap 3945454 3945454, overlap 3945451 3945454 TCAGTGCCGGAAAGA CGGCAGCGCCATCCGGCA CGCCAT CGCCTGATGGCGCTAC-G CTTATCAGGCCTGTG TERM 5191 3945493 - 3945454 - T 76 -12.1 -2.60813 | opp_overlap 3945454 3945454, overlap 3945451 3945453 CAGTGCCGGAAAGAC GGCAGCGCCATCCGGCA CGCCAT CGCCTGATGGCGCTACG CTTATCAGGCCTGTG TERM 5192 3945454 - 3945494 + T 70 -9 -3.30771 | gap 1, opp_overlap 3945451 3945453 3945454, overlap 3945454 CAGTGCCGGAAAGAC G-GCAGCGCCATCCGGC ACGCCATC GCCTGATGGCGCTACGC TTATCAGGCCTGTGA yidF 3946042 - 3945512 - | hypothetical protein TERM 5193 3945617 - 3945605 - G 76 -3.3 -5.1101 | GGAGTAGTTAAAAAA GGTCT GGT AGCCC TCGCAAAGCTGATTT yidG 3946401 - 3946039 - | hypothetical protein TERM 5194 3946175 - 3946163 - G 71 -4.8 -4.57569 | TGAGTTTCGGAAAAA TCGC TATGC GCGA CATCCATCAAATTAC yidH 3946738 - 3946391 - | putative inner membrane protein TERM 5195 3947223 - 3947200 - R 72 -3.2 -5.02074 | gap 1, overlap 3947204 CCATTCCCCAAAAAA TCACCGCCA GCAGTTG TGGC-GTGA TAATACGCAGGAACA yidE 3948841 - 3947180 - | hypothetical protein TERM 5196 3947559 - 3947524 - G 80 -4.6 -4.99043 | gap 1, overlap 3947527 3947528 3947538 CCGCCAGAAACAAAA CGA-TGCCTAACTCACG CAG CGCGAGGTTGGCGCTCG GCGGCATAAACCAGT TERM 5197 3947720 - 3947746 + g 70 -2.9 -4.73388 | overlap 3947722 TCCGATGCCGATAAA CACCGGCAG CATCTGCAC CTGCTGGAG TTTTTGCTGCGCGTT yis2 3949668 - 3948985 - | putative integrase protein TERM 5198 3949017 - 3949053 + g 100 -16.1 -3.54741 | opp_overlap 3949024, overlap 3949019 3949024 TGACAGTTTTTTGTC TGTAAAACGCCTGATGA ACA TCATCGGGCGTTTTGTA TTTCAGGGCCTGGTG TERM 5199 3949019 - 3949051 + g 100 -16.5 -3.35046 | opp_overlap 3949024, overlap 3949017 3949024 ACAGTTTTTTGTCTG TAAAACGCCTGATGA ACA TCATCGGGCGTTTTG TATTTCAGGGCCTGG TERM 5200 3949046 - 3949024 - G 91 -12 -4.07568 | opp_overlap 3949019 3949017 3949024 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG TERM 5201 3949024 - 3949046 + g 100 -14.2 -4.78848 | opp_overlap 3949024, overlap 3949019 3949017 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG SC3730 3950240 - 3949839 - | putative cytoplasmic protein TERM 5202 3950329 - 3950308 - R 100 -17.3 -5.24531 | ACGTGGCACAAAAAA GCCCCGCCA TCTC TGGCGGGGC AAGGCAAGGAGCTTA ibpB 3950773 - 3950345 - | heat shock chaperone IbpB TERM 5203 3950636 - 3950655 + g 79 -2.8 -5.17054 | overlap 3950635 3950637 TAACGCTAAGGTAAT GCGATAAT GGTT ATCGTCGC TTTTTTCGATGTTAT TERM 5204 3950782 - 3950799 + r 76 -4.9 -4.74103 | gap 1 TACGCATAATCATTT CTC-CTTC TAA GAAGCGAG TTTTTACCTTCACAC TERM 5205 3950874 - 3950858 - R 74 -11.5 -2.80113 | GAGCATGGGATGACA GGCCGCG CAA CGCGACC CGACGGAATCAGTTA ibpA 3951296 - 3950883 - | heat shock protein IbpA yidQ 3951603 - 3951938 + | hypothetical protein TERM 5206 3951949 - 3951978 + T 83 -10.7 -3.6707 | CCTGATTTATCGCCC GGTTTCCGTCACC CATA GCTGACGGAACCC TTTCACCTCTTCCAT yidR 3953166 - 3951940 - | putative cytoplasmic protein TERM 5207 3952040 - 3952026 - G 76 -3.4 -5.0133 | opp_overlap 3952034 3952035, overlap 3952029 CATCCGGTGAAAAAA CGACGG CGT CCGCAG ACGGCGGGTTGTCGT TERM 5208 3952381 - 3952353 - G 71 -10.9 -3.30701 | overlap 3952355 GGTGAGTAAAGGTAA GACGCCGCTGAAC TAC GCCCAACGGCGGC GATGGCATCGTTGAT TERM 5209 3952379 - 3952355 - G 78 -12.1 -3.21807 | overlap 3952353 TGAGTAAAGGTAAGA CGCCGCTGAAC TAC GCCCAACGGCG GCGATGGCATCGTTG TERM 5210 3953280 - 3953249 - R 93 -14.4 -3.31792 | gap 1, opp_overlap 3953249 3953248 3953252, overlap 3953252 GTATCATTGGGATAA CCAGGCCCGATGGCG CCT CGCCACCGGGCC-GT CAGGGTCTTATTTCT TERM 5211 3953278 - 3953252 - R 100 -21.6 -2.83271 | opp_overlap 3953249 3953248 3953252, overlap 3953249 TCATTGGGATAACCA GGCCCGATGGCG CCT CGCCACCGGGCC GTCAGGGTCTTATTT TERM 5212 3953545 - 3953555 + r 84 -8.2 -4.62069 | CCGCGTAGCCCAGCG CCGC ATC GCGG TTTTTCGGGTCCAGG ccmG 3954662 - 3954105 - | heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis ccmF 3956590 - 3954659 - | cytochrome c-type biogenesis protein ccmA 3957510 - 3956587 - | heme ABC exporter ATP-binding protein TERM 5213 3957323 - 3957338 + g 78 -6 -4.83169 | opp_overlap 3957310, overlap 3957290 3957325 AAGTGCAGGTTCTCC CGCGCC GTCA GGCGGG TTTTTATCCCCGGCT TERM 5214 3957434 - 3957476 + g 75 -6 -4.56775 | opp_overlap 3957426 CAGTACACCTCCCCA CCGTCCGGGCGCGCCAGC CCGGTCA GCAGGCGCAGCAGGGTGG TTTTTCCGGCGCCGT yhjA 3959003 - 3957603 - | putative cytochrome c peroxidase TERM 5215 3957991 - 3958005 + g 74 -7.1 -4.3467 | TAACCGTGTTTCTGT TGCGC GGTCA GCGCA TTTTCATCTCCACGT TERM 5216 3958047 - 3958057 + g 82 -5.4 -5.09426 | AAAGGCGGAATCCGG CGTT ATC AACG TTTTTTCGAATTCGG torD 3959825 - 3959193 - | chaperone protein TorD TERM 5217 3959301 - 3959281 - G 72 -2.5 -4.92783 | opp_overlap 3959293, overlap 3959282 AACGCAGCATAAAAA CCATAAGGA TCA TGCTTAAGG CAATTATTTGTAAAT TERM 5218 3959698 - 3959720 + g 86 -14.9 -2.94293 | overlap 3959695 3959700 TTTAACAGCGCCAGC CAGTCCGCG ATCTC CGCGGACTG TAATTGTATTAACCC TERM 5219 3959700 - 3959718 + g 76 -11.7 -3.02147 | overlap 3959698 3959695 TAACAGCGCCAGCCA GTCCGCG ATCTC CGCGGAC TGTAATTGTATTAAC torA 3962370 - 3959818 - | trimethylamine N-oxide reductase subunit TERM 5220 3960144 - 3960193 + g 91 -14.3 -3.14132 | gap 1, opp_overlap 3960144 CGCGTGCATTGAATA CCCGCACGATGTCACCGT-TGCGG ATC CCGCGCGCGCTGGCATCCTGTGGG TTAATAAAGACCGGC TERM 5221 3961648 - 3961666 + g 71 -4.5 -4.61231 | ATCGTGATCCGGGCA CCACCAG TTTGC CTGCTGG TTTTTCACCATATCA torC 3963544 - 3962360 - | trimethylamine N-oxide reductase, cytochrome c-type subunit, also has activity as negativer regulator of tor operon torR 3963674 - 3964366 + | DNA-binding transcriptional regulator TorR TERM 5222 3964740 - 3964774 + F 71 -10 -3.15663 | overlap 3964760 AGTTTCGCTGCACTT CAATGTCGTTATCGCC CCA GGCGATATCCACAATG TTGATGGCGCTGCCT TERM 5223 3966278 - 3966262 - g 76 -5.1 -4.77173 | overlap 3966265 GCTGGAGAAAATAAA CCAGTAC ACC ACACTGG TTACCCTGTTTCGTA TERM 5224 3967187 - 3967210 + G 74 -7.4 -4.08767 | gap 1, opp_overlap 3967199 GCGAAATTTACCGAT CGCG-GCAGCA TAG TGCTGCGCACG TTTTGCGACGATCAG TERM 5225 3968078 - 3968046 - g 84 -6.1 -5.04601 | overlap 3968047 3968048 CGCATAAATTAAAAA GCGGCTGCGCCAGCC TGG GGATGACGCAGGCAA CCGAAGCCTGTCGGG TERM 5226 3968077 - 3968047 - g 74 -9.6 -3.61676 | overlap 3968046 3968048 GCATAAATTAAAAAG CGGCTGCGCCAGCC TGG GGATGACGCAGGCA ACCGAAGCCTGTCGG torS 3965459 - 3968194 + | hybrid sensory histidine kinase TorS dgoT 3969557 - 3968220 - | major facilitator superfamily D-galactonate transporter TERM 5227 3968563 - 3968594 + g 77 -3.6 -5.03747 | gap 1, opp_overlap 3968546 3968562 AAACCGCAAATAATC GGCGTTTTGC-GCGC CAC GCCCAGCGAGAAGCC TTTTTTCACCAGTTT TERM 5228 3969600 - 3969616 + r 70 -10.1 -3.09784 | opp_overlap 3969597, overlap 3969599 TTATATTTAAATTGG GTTGCCC GGA GGGCGAC GTTTGTTGAGCCTAC dgoA 3970790 - 3969642 - | galactonate dehydratase dgoA 3971404 - 3970787 - | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase TERM 5229 3970978 - 3970954 - G 70 -9.9 -3.41222 | opp_overlap 3970954, overlap 3970913 3970952 3970975 CGCCAACGGCAAATA GCGGAACATCC GGC GGAAGTACCGC TTTCAGCGCGCTGAT TERM 5230 3970954 - 3970978 + g 71 -9.9 -3.5393 | opp_overlap 3970913 3970954 3970952 3970975 CGCCAACGGCAAATA GCGGAACATCC GGC GGAAGTACCGC TTTCAGCGCGCTGAT dgoK 3972266 - 3971388 - | 2-oxo-3-deoxygalactonate kinase TERM 5231 3972153 - 3972169 + g 72 -12.3 -2.7127 | overlap 3972152 3972155 AGGAGATTTACCGTT CAGGCGT GTA ACGCCTG CTTCTGATTGCCTGC TERM 5232 3972178 - 3972194 + g 71 -8 -3.88291 | overlap 3972181 ACGCCTGCTTCTGAT TGCCTG CTCTC CAGGCA TTTGTCGCCCTGGTA dgoR 3972952 - 3972263 - | galactonate operon transcriptional repressor TERM 5233 3972435 - 3972455 + g 74 -9.8 -3.76373 | opp_overlap 3972427 3972425 TCAAATACCGCTCGC TGTAGCGA GCTGA TCGCTACA TTTAACTGTTGCAAC TERM 5234 3973061 - 3973092 + r 72 -8.9 -3.64703 | opp_overlap 3973062, overlap 3973062 GTTATCATGTCATTA ATGTAGTACAACA CAATTA TGTTGTACTACAA TTTAGATCACAAAAA TERM 5235 3973091 - 3973062 - R 83 -13.1 -3.17212 | opp_overlap 3973061 3973062 TTATCATGTCATTAA TGTAGTACAACAC AATT ATGTTGTACTACA ATTTAGATCACAAAA TERM 5236 3973062 - 3973091 + r 79 -12.4 -2.78679 | opp_overlap 3973062, overlap 3973061 TTATCATGTCATTAA TGTAGTACAACA CAATTA TGTTGTACTACA ATTTAGATCACAAAA TERM 5237 3973176 - 3973160 - R 100 -9.4 -5.82281 | opp_overlap 3973160 AAAGACATAAAAAAA CCCGCA GCAAG TGCGGG TCGTTAAGCGCGTAT yidA 3974058 - 3973213 - | sugar phosphatase TERM 5238 3974376 - 3974402 + G 81 -6.6 -4.68209 | opp_overlap 3974384 TACCGCCCCGCCTGG CAGGAAAAGATT TTT AATCGTTGCCTG TTTATTTATTGGAAT gudP 3974347 - 3975609 + | putative permease dgoA 3975623 - 3976816 + | mandelate racemase/muconate lactonizing family protein TERM 5239 3976848 - 3976822 - f 77 -10.8 -3.37556 | opp_overlap 3976821 3976819, overlap 3976817 3976824 CGTAAAATAAGCCAA CAGTCTGCCTGC GCC GCAGGCAGACAC CCTGTATTTGCGAGT TERM 5240 3976846 - 3976824 - f 100 -17.8 -3.24545 | opp_overlap 3976821 3976819, overlap 3976822 3976817 TAAAATAAGCCAACA GTCTGCCTGC GCC GCAGGCAGAC ACCCTGTATTTGCGA TERM 5241 3977425 - 3977412 - g 71 -4.5 -4.59993 | AAATCGACAAACAAA CGCTG TTCA CAACG GAAATCGCCCTGTAC SC3752 3977063 - 3977851 + | LysR family transcriptional regulator gyrB 3980262 - 3977848 - | DNA gyrase subunit B TERM 5242 3978135 - 3978151 + g 72 -12.3 -2.75992 | overlap 3978117 3978132 GCTGGCGACGCTCGC CGCGTTC GAT GAACGCG TCCTCTTCAATCAGA TERM 5243 3979336 - 3979347 + g 78 -2.2 -5.21709 | overlap 3979322 ATCATCGCCGGTAGC GCTG ACTT TAGC TTTTTTGCTGTAACC TERM 5244 3980064 - 3980089 + g 73 -10.5 -3.38046 | overlap 3980062 TTACGGACACGGAGT TATCGGCGTGA ATAG TCACGACGATA TCTTTACAGTGACCC recF 3981364 - 3980291 - | recombination protein F dnaN 3982612 - 3981512 - | DNA polymerase III subunit beta TERM 5245 3982545 - 3982576 + g 81 -8.6 -4.30809 | gap 1, opp_overlap 3982528 GGCAGCGTAGGACGA CCGC-CCAGCGGGCC GCT GACCTGCTGAAGCGG TTTTAATAAATGTTC dnaA 3984017 - 3982617 - | chromosomal replication initiation protein TERM 5246 3983069 - 3983093 + g 91 -7.1 -5.14965 | overlap 3983061 ACGCTACTTCGCCTG GCAGACGAATA TCA TTTTCGTCCGC TTTTTTCATCAGGAT TERM 5247 3983703 - 3983752 + g 74 -4.2 -4.70879 | opp_overlap 3983738, overlap 3983700 3983703 3983715 3983751 AGGCGCTACGCGCTG CGGCTGCGC-CGTCGTTGTCTGCG TAGG CGC-GACAACGTTATGCACAGGCG TTTTTAGCGTTTGCG TERM 5248 3983715 - 3983739 + g 71 -10.8 -3.29043 | gap 1, opp_overlap 3983738, overlap 3983700 3983703 CTGCGGCTGCGCCGT CGTTGTCTGCG TAGG CGC-GACAACG TTATGCACAGGCGTT rpmH 3984678 - 3984818 + | 50S ribosomal protein L34 rnpA 3984868 - 3985284 + | ribonuclease P TERM 5249 3985767 - 3985751 - g 89 -13.7 -3.58343 | TCTATCAGGCGCAAA GCGGCCT GAC AGGCCGC GACGGCCCGGATAAC yidC 3985417 - 3987063 + | putative inner membrane protein translocase component YidC TERM 5250 3987178 - 3987151 - f 78 -12.8 -2.58861 | opp_overlap 3987156, overlap 3987156 TATCAGGCCTACAAT CAAAAGGCGGTC ATAT GACCGCCTTTTT TTATTGCAACAAAGT TERM 5251 3987156 - 3987173 + F 100 -12.7 -5.7946 | opp_overlap 3987151 3987156 GGCCTACAATCAAAA GGCGGTC ATAT GACCGCC TTTTTTTATTGCAAC TERM 5252 3987173 - 3987156 - f 100 -12.7 -4.48987 | opp_overlap 3987156, overlap 3987151 GGCCTACAATCAAAA GGCGGTC ATAT GACCGCC TTTTTTTATTGCAAC trmE 3987205 - 3988569 + | tRNA modification GTPase TrmE TERM 5253 3988717 - 3988759 + F 75 -6.4 -4.53163 | overlap 3988754 CGCGCAACGTCGCCC CGTATTCTTAGC-GCCACAC TTTTC GTGAGGCCGCTATGAA-ACG TTTTCTACTGTGTAG yidY 3988752 - 3989939 + | multidrug efflux system protein MdtL yieE 3990997 - 3991752 + | hypothetical protein yieF 3991770 - 3992336 + | hypothetical protein TERM 5254 3992385 - 3992356 - T 100 -13.8 -3.75169 | opp_overlap 3992351 TATCACCGTAGTAAA TATGCGTGCTTT TTTAGT AAAGCACGCATA TCCGATGTGATGTAA SC3764 3992663 - 3992343 - | hypothetical protein TERM 5255 3992802 - 3992784 - R 93 -14.6 -3.32022 | opp_overlap 3992784 GTTTCTATACATTAA TGGGCGGT TTT ACCGCCCA TTTCGTTGTTCTTAG TERM 5256 3992784 - 3992802 + r 100 -14.6 -4.14945 | opp_overlap 3992784 GTTTCTATACATTAA TGGGCGGT TTT ACCGCCCA TTTCGTTGTTCTTAG yieG 3994277 - 3992814 - | xanthine/uracil permease family protein TERM 5257 3993287 - 3993267 - G 74 -6.7 -4.28111 | overlap 3993269 GATACTATCAACAAA CAGCGCCTG CTT CATGCGCGG GAATTTGCCTTTCTC TERM 5258 3994030 - 3994016 - G 74 -2.1 -5.06414 | GCGGGTTAACAAAAA CGATA TAAAC CATCG TCAGGAAAGTGGTAA yieH 3994320 - 3994985 + | 6-phosphogluconate phosphatase phoU 3995805 - 3995080 - | transcriptional regulator PhoU pstB 3996593 - 3995820 - | phosphate transporter subunit pstA 3997570 - 3996680 - | phosphate transporter permease subunit TERM 5259 3997339 - 3997365 + g 93 -17.3 -2.94144 | gap 1, overlap 3997336 GGGCGTTCGCCAGCC CGCCGCCCGCCG TATT CGGCGG-CGGCG TAATTTCGGTAAACA pstC 3998529 - 3997570 - | phosphate transporter permease subunit TERM 5260 3998474 - 3998445 - G 89 -13.7 -3.53933 | gap 1, overlap 3998439 ACATCAATAGCACAA TCAGCGCAGCCAGT TTT ACTAGC-GCGCTGA AAATCATGTCGCCTT pstS 3999705 - 3998665 - | phosphate transporter subunit TERM 5261 3999418 - 3999441 + g 86 -7.4 -4.72272 | opp_overlap 3999418 GATCACCGTCGGAAA CTGGAACAGG CCTT CCTGATTCAG TTTTTCGTCAGACAG TERM 5262 3999854 - 3999828 - R 100 -12.2 -5.96894 | ATGGAAATAAAAAAA GCTGGCCCGGGG AGA CACCAGACCAGC CTGCAGGGGGAGATG aroE 4002090 - 4001272 - | shikimate 5-dehydrogenase TERM 5263 4002509 - 4002487 - g 73 -6.2 -4.40561 | opp_overlap 4002491 GCTGGGTAAAAATAA GCACCAGGTG GCG CAACTGTTGC GTTCAAAGCTGGGCT TERM 5264 4003046 - 4003015 - g 70 -6.6 -4.08216 | opp_overlap 4003019, overlap 4003018 4003039 TGAGGTGGTGGAAAA CAATGGCTTTCATC TGCA AATGAAGGCCTTTG ACCACTATTTCGGTC yabN 4002278 - 4003942 + | putative dipeptide/oligopeptide/nickel ABC-type transport systems, periplasmic component TERM 5265 4004051 - 4004068 + T 85 -12.7 -3.38272 | opp_overlap 4004051 CGGCGCACAAAAAAA GGCCGTC TATC GACGGCC TTCTGCCTGGTACTA TERM 5266 4004068 - 4004051 - T 100 -12.7 -5.60993 | opp_overlap 4004051 CGGCGCACAAAAAAA GGCCGTC TATC GACGGCC TTCTGCCTGGTACTA glmS 4005922 - 4004093 - | D-fructose-6-phosphate amidotransferase TERM 5267 4005111 - 4005125 + g 74 -4.9 -4.74801 | opp_overlap 4005094, overlap 4005094 TGACCGTGGCTGATG CGCCC GGTAA GGGTG TTTTTGATCGCGTTC glmU 4007481 - 4006111 - | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 5268 4007757 - 4007776 + r 83 -9.2 -4.27584 | opp_overlap 4007757 TCAGAAAAGCAAAAA CCAGCGAC AGAG GCCGCTGG TTTTCCGTTGCGCGT TERM 5269 4007776 - 4007757 - R 100 -11.4 -5.1417 | opp_overlap 4007757 TCAGAAAAGCAAAAA CCAGCGAC AGAG GCCGCTGG TTTTCCGTTGCGCGT TERM 5270 4008409 - 4008394 - R 72 -6 -4.55023 | overlap 4008386 CTCAATACGATAAAA CCGACG ATGG CGACGG CGAGATGAAGATAAG TERM 5271 4008610 - 4008597 - R 81 -8.1 -4.43879 | opp_overlap 4008604, overlap 4008599 AGGATTTAATGAAAA CAGCG CTGT CGCTG AAAACGCGTCGCCTT TERM 5272 4008686 - 4008705 + r 82 -7.8 -4.61566 | opp_overlap 4008686, overlap 4008681 GAGGATAAAAAAAAA CCAGTCCG CAAT CAGACTGG TTTTATGCTTTCAAG TERM 5273 4008705 - 4008686 - R 100 -10 -6.26417 | opp_overlap 4008686 4008681 GAGGATAAAAAAAAA CCAGTCCG CAAT CAGACTGG TTTTATGCTTTCAAG atpC 4009146 - 4008727 - | F0F1 ATP synthase subunit epsilon atpD 4010549 - 4009167 - | F0F1 ATP synthase subunit beta atpG 4011439 - 4010576 - | F0F1 ATP synthase subunit gamma TERM 5274 4011264 - 4011297 + g 79 -12.5 -2.91264 | opp_overlap 4011264, overlap 4011275 TTATATTCCAGATTA CCGTTCGCAAGGTGA CCAA TCACTTTGCGCATGG TCTCTGCATAAGGAC atpA 4013031 - 4011490 - | F0F1 ATP synthase subunit alpha TERM 5275 4012469 - 4012505 + g 83 -10.1 -4.13014 | overlap 4012463 4012470 CATTTGATGCCGGAG TCGCGCTGGTTGATGAT GGC GTCGATAGCCAGCGCGG TTTTACCGGTCTGAC TERM 5276 4012470 - 4012504 + g 72 -11.4 -3.07487 | overlap 4012463 4012469 ATTTGATGCCGGAGT CGCGCTGGTTGATGAT GGC GTCGATAGCCAGCGCG GTTTTACCGGTCTGA atpH 4013577 - 4013044 - | F0F1 ATP synthase subunit delta atpF 4014062 - 4013592 - | F0F1 ATP synthase subunit B TERM 5277 4013936 - 4013957 + g 71 -7.3 -3.92869 | opp_overlap 4013930 4013929 CAGCAGAAGCGAGAC CGTCAGCAA TTTC TTTCTGACG TTTCTCGATAGCTGC atpL 4014361 - 4014122 - | F0F1 ATP synthase subunit C atpB 4015223 - 4014408 - | F0F1 ATP synthase subunit A TERM 5278 4014910 - 4014890 - G 74 -11.1 -3.29325 | overlap 4014888 GGTTCATAAGGAATA CCCAGACGA AAA TCGTCAGGG CCAGCGGCGCAATCA atpI 4015612 - 4015232 - | F0F1 ATP synthase subunit I SC3785 4015870 - 4015727 - | hypothetical protein gidB 4016850 - 4016227 - | glucose-inhibited division protein B gidA 4018842 - 4016953 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 5279 4017133 - 4017159 + g 70 -3 -4.7173 | overlap 4017124 ATCCAGCGTGGCAGG CAGCAACGTA TTCTCGT TACGTAGTTG TTTTTCAATCTCATC mioC 4019664 - 4019221 - | flavodoxin TERM 5280 4019781 - 4019749 - R 79 -4.2 -5.14563 | gap 1, opp_overlap 4019749 4019750, overlap 4019750 TGTGGGATTAAAAAA GCCGATCATG-GC TTGATGGT GCGCATGATCGGG TTCTGCAAGACGATC asnC 4020212 - 4019754 - | DNA-binding transcriptional regulator AsnC TERM 5281 4020672 - 4020617 - g 91 -17.1 -2.73875 | gap 2 CCTGGGGCAACATGA CTTCAGCGCGGGCGAAGGGCTGTACAC GCAC ATGAA-AGCCCTTCGCCC-CGATGAAG ACCGACTCTCTCCGC TERM 5282 4020925 - 4020948 + G 74 -3.1 -4.91109 | gap 1, opp_overlap 4020913, overlap 4020928 AAGGGCGCGAACGCG CGATCGCCAA AGAAC TTGGCGC-CG TTTTTCTGGTGGGGA asnA 4020363 - 4021355 + | asparagine synthetase AsnA yieM 4022811 - 4021360 - | hypothetical protein TERM 5283 4022190 - 4022206 + g 74 -10.1 -3.67188 | overlap 4022188 TTAGCTCCGGCTGGG CGGCGAG AAA TTCGCCG TATTTTACGATCAGT TERM 5284 4022667 - 4022680 + g 77 -3.7 -5.00616 | overlap 4022672 GCCAGCGCGGGAGAT CGGCG GTCA CGGCG TTTTTTAAACGCGGA yieN 4024334 - 4022805 - | regulatory ATPase RavA TERM 5285 4023274 - 4023301 + g 70 -5.6 -4.51799 | opp_overlap 4023274, overlap 4023298 CGACGGCTGAACATA CCGCCTTC TTTAATGACGGT GAAGGCGG TTTTATCGCTTTGCT TERM 5286 4023634 - 4023650 + g 73 -5.1 -4.62302 | ACCGGATCAGGCAGT GAAATCG CGC CGATATC TTTTTGCCACTGTTG TERM 5287 4023817 - 4023833 + g 70 -10.1 -3.33696 | AAGGCTTCCAGGCTG CTGTCCG CTT CGGGCAG TTCGTTAGAGGCCGC TERM 5288 4024110 - 4024099 - G 77 -7.2 -4.26589 | ATCAGATATTCAAAA GCGC GGGC GCGC TGGAAAGCAAACTTC TERM 5289 4024452 - 4024466 + H 79 -4.2 -5.24129 | overlap 4024451 ATTTTATGATTAATC GTGCAT ACT GTGCGC TTTTTTGTGGGCCAA TERM 5290 4025541 - 4025561 + G 81 -11.9 -3.58731 | overlap 4025532 4025530 CCGCGCTGGCGACGG TGATCGCCT CCC AGGCGGTCA TTTCCGGCGTCTTTT trkD 4024649 - 4026517 + | potassium transport protein Kup TERM 5291 4026606 - 4026583 - f 90 -14 -3.32343 | opp_overlap 4026585 4026588 4026594, overlap 4026588 CGTAGATTCCCACAA GATAATCGCC ATCG GGCGATTATC TTCACCTGATTTCCG TERM 5292 4026585 - 4026604 + F 73 -10.8 -3.0873 | opp_overlap 4026583 4026588, overlap 4026588 4026594 TAGATTCCCACAAGA TAATCGCC ATCG GGCGATTA TCTTCACCTGATTTC TERM 5293 4026601 - 4026588 - f 72 -8.1 -3.75378 | opp_overlap 4026588 4026585 4026594, overlap 4026583 ATTCCCACAAGATAA TCGCC ATCG GGCGA TTATCTTCACCTGAT TERM 5294 4026588 - 4026601 + F 72 -8.1 -3.67878 | opp_overlap 4026583 4026588, overlap 4026585 4026594 ATTCCCACAAGATAA TCGCC ATCG GGCGA TTATCTTCACCTGAT TERM 5295 4027083 - 4027066 - gf 81 -4.1 -5.2166 | overlap 4027054 4027058 4027067 GAACAATTCAAAAAA TTGACTG CAGA CAGTCAG GCGGTGATTCGCAGC rbsD 4026733 - 4027152 + | D-ribose pyranase rbsA 4027115 - 4028665 + | D-ribose transporter ATP binding protein TERM 5296 4028775 - 4028787 + G 76 -3.4 -5.10029 | CGCGATTGTTTCGAC GTTG AGCCC CAAC TTTTTTACCGTTAAT rbsC 4028671 - 4029663 + | ribose ABC transporter permease protein TERM 5297 4030109 - 4030092 - g 76 -3.3 -5.04385 | overlap 4030093 4030094 TATATCGCGAAAAAA GCTGGCG AAGG CGCCAAA GTGATTGAGTTGCAA TERM 5298 4030532 - 4030503 - g 70 -2.9 -4.70879 | overlap 4030504 4030518 CTGAAAGGCGAAAAA GTTCAGGCCAA ATATCCGG TTGACCTGAAA CTGGTCATCAAGCAG rbsB 4029660 - 4030550 + | D-ribose transporter subunit RbsB rbsK 4030683 - 4031612 + | ribokinase TERM 5299 4032376 - 4032390 + G 71 -11.4 -2.87132 | overlap 4032388 ATGCGATGGCTGTCG GCGCCT ATC AGGCGC TATATCAGGCGGGGC rbsR 4031625 - 4032614 + | transcriptional repressor RbsR yieO 4034007 - 4032580 - | MFS family tranport protein TERM 5300 4033721 - 4033701 - G 73 -6.2 -4.42748 | CGACGCGAAAAATAA CCAATTCA GATAG TGAACTGG AGAGCGCGCAGGCCA TERM 5301 4033977 - 4033951 - G 71 -7.3 -4.06419 | gap 2, opp_overlap 4033975 CGCCTGCATAAAGAA GGCCATTGCCGCG ATC CACGGC-A-GGCC AGCCATGCTGCGCGC yieP 4034723 - 4034019 - | GntR family transcriptional regulator TERM 5302 4034651 - 4034661 + g 70 -6.8 -4.07568 | CACCCTTTAATATCC GCTG CGC CAGC TTTTCAGCCAGAACA TERM 5303 4037135 - 4037098 - R 77 -3.4 -5.14563 | opp_overlap 4037100 4037128, overlap 4037100 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 5304 4037198 - 4037174 - R 71 -8 -3.93061 | gap 1, opp_overlap 4037174 4037181, overlap 4037178 4037184 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5305 4037750 - 4037738 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5306 4040598 - 4040617 + r 100 -10.8 -5.81412 | opp_overlap 4040598 CCCTGCCAGAAATAA TCCTTAGC ATCT GCTAAGGA TTTTTTTTGCCTAAA TERM 5307 4040617 - 4040598 - R 87 -10.8 -4.06419 | opp_overlap 4040598 CCCTGCCAGAAATAA TCCTTAGC ATCT GCTAAGGA TTTTTTTTGCCTAAA TERM 5308 4040657 - 4040634 - R 76 -8.3 -4.07568 | opp_overlap 4040639 TTTTTTTGCCTAAAA TTACCTGAT TATCTG ATCAGGTAA TCGTGAGTTCCCTTC yifA 4041539 - 4040691 - | transcriptional regulator HdfR yifE 4041646 - 4041984 + | hypothetical protein TERM 5309 4041991 - 4042003 + T 90 -6.9 -5.40072 | opp_overlap 4041985 4041991 4041992 GATGATTAATAAAAA GGGCG TAA TGCCC TTTTTTTACGCCAAC TERM 5310 4042003 - 4041991 - T 85 -6.2 -5.15167 | opp_overlap 4041991, overlap 4041985 4041992 GATGATTAATAAAAA GGGC GTAAT GCCC TTTTTTTACGCCAAC yifB 4043529 - 4042009 - | putative ATP-dependent protease TERM 5311 4042292 - 4042306 + g 80 -4.2 -5.0538 | TACTGCCGTTCATGG GCGG CGATGAC CCGC TTTTTTACCGTAGCG TERM 5312 4042739 - 4042752 + g 72 -2.3 -4.8667 | opp_overlap 4042739 GGTGAGCGAAAGGGA CGTTG CTGC CATCG TTTTTGTACCGTATC TERM 5313 4044014 - 4043987 - H 79 -11.2 -3.45366 | opp_overlap 4043989, overlap 4043972 4043989 GCCTTAACGAACTAA GACCCCCGCACC GAAA GGTCCGGGGGTT TTTTTTGGCCTGAAA TERM 5314 4044012 - 4043989 - H 86 -13.8 -3.29727 | opp_overlap 4043989, overlap 4043987 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGGCCTGA TERM 5315 4043989 - 4044012 + H 100 -13.8 -5.78622 | opp_overlap 4043989 4043987 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGGCCTGA TERM 5316 4044265 - 4044299 + H 73 -7.8 -4.03978 | overlap 4044249 4044245 4044267 4044268 TGCCGCAATGGCGGC AATCGGTTATGCCCGT TCT ACCGGCAAAACCGGTG TTTGTATCGCCACTT TERM 5317 4044267 - 4044297 + H 79 -10.4 -3.61232 | overlap 4044245 4044265 4044268 CCGCAATGGCGGCAA TCGGTTATGCCCGT TCT ACCGGCAAAACCGG TGTTTGTATCGCCAC TERM 5318 4044268 - 4044296 + H 77 -11.7 -2.76418 | overlap 4044245 4044267 4044265 CGCAATGGCGGCAAT CGGTTATGCCCGT TCT ACCGGCAAAACCG GTGTTTGTATCGCCA ilvM 4045746 - 4046009 + | acetolactate synthase 2 regulatory subunit TERM 5319 4046016 - 4045999 - f 72 -5.5 -4.3767 | overlap 4046001 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAAGAAAAATGAC ilvE 4046027 - 4046956 + | branched-chain amino acid aminotransferase TERM 5320 4048641 - 4048659 + G 95 -11 -4.56597 | TGGGCAAAGCCTGCG CGCTCATC ACC GATGGGCG TTTTTCCGGCGGGAC ilvD 4047116 - 4048966 + | dihydroxy-acid dehydratase TERM 5321 4049247 - 4049203 - g 95 -5.6 -5.30348 | gap 1, opp_overlap 4049202 ACCGAAGAACAAAAA GCCCACGGCGTGATTA-CCGC GTCG GCGGGCAATCATGCGCAGGGC GTGGCGTTCTCCTCC ilvA 4048969 - 4050513 + | threonine dehydratase TERM 5322 4050740 - 4050723 - f 72 -5.7 -4.40963 | ACCTGTTAAAAACAA TGTATAA AATT TTATACA CAAGGATGTTATGTT SC3811 4050796 - 4051113 + | putative cytoplasmic protein SC3812 4051110 - 4051451 + | putative cytoplasmic protein ilvY 4052341 - 4051454 - | DNA-binding transcriptional regulator IlvY TERM 5323 4051489 - 4051505 + g 100 -9.4 -5.40072 | opp_overlap 4051489 4051478 AGAACGCATCAATTA GCGGCT CATGC AGCCGC TTTTTTTGCGCGCAG TERM 5324 4052233 - 4052201 - G 93 -13.4 -3.86897 | GTTATCGCGCACAAA CAGCGGCTGGCCGA GATCT TCTTCCAGCCGCTG AATCTGCCGGGAAAG ilvC 4052506 - 4053981 + | ketol-acid reductoisomerase TERM 5325 4054057 - 4054069 + T 89 -6.2 -5.28942 | GCCGGGTAAGGCGTA GCCG CCAAC CGGC TTTTTATTTGCGATA ppiC 4054354 - 4054073 - | peptidyl-prolyl cis-trans isomerase C (rotamase C) SC3816 4054359 - 4054706 + | hypothetical protein punC 4054682 - 4054792 + | putative inner membrane protein TERM 5326 4054803 - 4054828 + G 88 -13.3 -3.32202 | overlap 4054801 GCTGATTGACCTTTT CCAGGCTGCCT GAAA AAGCAGCCTGG TCTTCTCTGGGCCTC rep 4054793 - 4056916 + | ATP-dependent DNA helicase Rep gppA 4058437 - 4056956 - | guanosine pentaphosphate phosphohydrolase TERM 5327 4058319 - 4058329 + g 78 -6.8 -4.65916 | AGACCCGCGGCCAGA CGCA CCT TGCG TTTTATTCGGGTCAG rhlB 4059821 - 4058556 - | ATP-dependent RNA helicase RhlB TERM 5328 4059073 - 4059091 + g 72 -3.8 -4.73864 | overlap 4059074 CACTCTTCTTCGATC AGCGTTTG CAG TAAACGCA TTTTCTCTTCATTAG trxA 4059887 - 4060294 + | thioredoxin TERM 5329 4060304 - 4060354 + F 71 -10.6 -2.74563 | gap 1 GCGTAATACCTTTTA TACGTCGAATGACAAAGGCGCTG TATAGT CAG-GCGTCTGTCATTCGACGAA TGATTAAGGTATCAG rho 4060641 - 4061972 + | transcription termination factor Rho TERM 5330 4061986 - 4062017 + F 100 -14.6 -4.65446 | opp_overlap 4061974 4061992, overlap 4061992 AACCTGGTCTTTACC TGAAAACGCCACGT TTTT ACGTGGCGTTTTTG TTTTATATCTGTAAT TERM 5331 4062011 - 4061992 - f 100 -13.6 -4.13767 | opp_overlap 4061992 4061986 GTCTTTACCTGAAAA CGCCACGT TTTT ACGTGGCG TTTTTGTTTTATATC TERM 5332 4061992 - 4062011 + F 100 -13.6 -5.58522 | opp_overlap 4061992, overlap 4061986 GTCTTTACCTGAAAA CGCCACGT TTTT ACGTGGCG TTTTTGTTTTATATC TERM 5333 4062232 - 4062248 + G 100 -8.1 -5.7946 | TTTACTGACCGTGAG TACTGAT CTC ATCAGTA TTTTTTTATTCACGA TERM 5334 4062323 - 4062303 - g 91 -2.6 -5.77853 | overlap 4062305 AAGTTGCAAAAAAAA TCGGTTTA GTGGA TAAACCCA ACTTTCGTAAACGCC wecA 4062212 - 4063315 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyl wzzE 4063327 - 4064373 + | lipopolysaccharide biosynthesis protein WzzE wecB 4064552 - 4065559 + | UDP-N-acetyl glucosamine -2-epimerase TERM 5335 4066625 - 4066598 - g 74 -10.6 -3.55444 | gap 1, overlap 4066601 TGGGGATCGCCCAAA GTATCGCCCGCTG GCA CAGCGG-CGAAAC CCTGGTCGTCGAACC wecC 4065556 - 4066818 + | UDP-N-acetyl-D-mannosamine dehydrogenase rffG 4066818 - 4067885 + | dTDP-glucose 4,6-dehydratase TERM 5336 4068229 - 4068247 + G 81 -3.9 -5.14563 | TGAACCCTCATGCCT GGTATTG GGCGA CAATATC TTTTTTGGTCAGGGC TERM 5337 4068407 - 4068397 - g 71 -4.6 -4.63218 | CTCGCTGGAAGAAAA GCCG AAA CAGC CTAAATCTAACTGGG TERM 5338 4068757 - 4068744 - g 74 -2.3 -5.03314 | overlap 4068745 GTCAGCTTGAAAAAA CCGGC TATG GCCAA TATTTACTGGAGTTG rffH 4067918 - 4068799 + | glucose-1-phosphate thymidylyltransferase wecD 4068777 - 4069454 + | TDP-fucosamine acetyltransferase TERM 5339 4070333 - 4070313 - g 74 -7.5 -4.09685 | opp_overlap 4070313 4070314, overlap 4070314 TTCTATTCCGGAAAA CTGCGGGCA TAA TGCCCACAT GTTTTACATCAAACT TERM 5340 4070332 - 4070314 - g 72 -11 -3.05597 | opp_overlap 4070313 4070314, overlap 4070313 TCTATTCCGGAAAAC TGCGGGCA TAA TGCCCACA TGTTTTACATCAAAC TERM 5341 4070314 - 4070332 + G 70 -8.8 -3.69216 | opp_overlap 4070314 4070313, overlap 4070313 TCTATTCCGGAAAAC TGCGGGCA TAA TGCCCACA TGTTTTACATCAAAC wecE 4069459 - 4070589 + | TDP-4-oxo-6-deoxy-D-glucose transaminase wzxE 4070591 - 4071841 + | O-antigen translocase in LPS biosyntesis TERM 5342 4071890 - 4071900 + G 74 -4.6 -4.68593 | opp_overlap 4071885 CTCACCATAACCACA CCGT GCT GCGG TTTTTCAATGATACG TERM 5343 4071989 - 4072004 + G 72 -2.4 -4.84359 | TCACGGAAAGCTGTC CGGCGC TCTC GCTTCG TTTTTATGGCAGTAA TERM 5344 4072114 - 4072100 - g 72 -11.4 -3.05963 | opp_overlap 4072097 4072111, overlap 4072103 ACGGTCAGTTCAACA CCAGCC TGT GGCTGG CGCTGTTAAGCGGCG TERM 5345 4072193 - 4072207 + G 70 -5.6 -4.386 | ACGAAGTGTCCCACG GGCTGA AAT TCCGCC TTTTCTACCCGCTTC SC3832 4071838 - 4072917 + | 4-alpha-L-fucosyltransferase TERM 5346 4073202 - 4073185 - g 88 -9.9 -4.42653 | opp_overlap 4073185, overlap 4073199 4073200 ACGTGACCTATAAAA CGCGTTT ACGC AAACGCG TTGTGGATGTACCAC TERM 5347 4073185 - 4073202 + G 70 -9.9 -3.39327 | opp_overlap 4073185 4073199 4073200 ACGTGACCTATAAAA CGCGTTT ACGC AAACGCG TTGTGGATGTACCAC wecF 4072914 - 4074272 + | putative entero common antigen polymerase TERM 5348 4074661 - 4074650 - g 73 -5.8 -4.44548 | CAGACGGAAGCAAAA CTGC GGAC GCAG TGGAACGTCAATATT wecG 4074269 - 4075009 + | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 5349 4075187 - 4075175 - f 79 -9.1 -4.03888 | TACCCATAACAATAA CCGGT ACT ACCGG AACCGTTGCAAACAC TERM 5350 4076188 - 4076163 - g 87 -8.3 -4.56597 | gap 1, overlap 4076164 CGCGCTGGCGAAAAA CCGTCAACTGCC GGC GGCAGTCG-CGA AAGTCTCTCGCCACG TERM 5351 4076187 - 4076164 - g 70 -9.6 -3.33744 | gap 1, overlap 4076163 GCGCTGGCGAAAAAC CGTCAACTGCC GGC GGCAGTCG-CG AAAGTCTCTCGCCAC TERM 5352 4076213 - 4076233 + G 70 -3.1 -4.70319 | overlap 4076197 4076196 4076215 4076217 GCCACGGCGTGCCGG TCGCGGGCG TGG CGCTCTCTA TTTTGATTTTGCTGG yifK 4075216 - 4076601 + | putative transport protein YifK TERM 5353 4077145 - 4077160 + T 100 -11.8 -5.8901 | CCGACCAATTTTGAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT TERM 5354 4077348 - 4077332 - T 79 -9.3 -4.16943 | GGCGACACGCTAAAA CCTCGCC AGC GGCGGGG GGATGACAATCGCGT TERM 5355 4077619 - 4077643 + T 100 -14.3 -5.65177 | ACAGACCTGTTTTGA CGCCTGCCC CTTAACC GGGCAGGCG TTTTTTTATGCATCT hemY 4078917 - 4077718 - | putative protoheme IX biogenesis protein TERM 5356 4078386 - 4078408 + g 70 -5.4 -4.4078 | overlap 4078377 4078387 CCTCCAGCAGTTTGT CCACGCCGTG ACG CGCTGCGTGA TTTTCATTGCGCGCC hemX 4080086 - 4078917 - | putative uroporphyrinogen III C-methyltransferase TERM 5357 4079870 - 4079884 + g 82 -11.4 -3.84451 | overlap 4079864 CGGTCAGTTGCGTCG CCAGCG CAT CGCTGG TTTCCGTTTGCGCGG TERM 5358 4079958 - 4079988 + g 83 -9.6 -4.11105 | opp_overlap 4079975 CAGGGCAATCGCAAT CGCCACCGCGCT TAATACC AGCGCGGCGCCG TTCTTACTTTTTTTC hemD 4080848 - 4080108 - | uroporphyrinogen-III synthase TERM 5359 4080416 - 4080391 - G 75 -3.9 -4.91459 | gap 1 TAACATTCACAAAAA CTGACTTCG-GC TCC GCGCGCTGTCAG GGTTTCGCCCAGCAG hemC 4081807 - 4080845 - | porphobilinogen deaminase TERM 5360 4081062 - 4081082 + g 72 -11.1 -3.15579 | opp_overlap 4081065 CCAATCGGCACCTGA CAACCGCCT TCC AGGCGGGTG TTCATAGCGCGTTCC TERM 5361 4081079 - 4081065 - G 75 -11.4 -3.32963 | opp_overlap 4081062 ATCGGCACCTGACAA CCGCCT TCC AGGCGG GTGTTCATAGCGCGT TERM 5362 4081476 - 4081466 - G 74 -8.2 -4.05033 | overlap 4081467 TTTATTCGAGACAAA CGCG TCG CGCG GATCTTCGCGCTCGC TERM 5363 4083416 - 4083436 + G 70 -6.8 -4.11484 | GGATATCGGCGTACT GACGCGTA AGCTG TACGCGGC TTTTGAAGCGTTGCC cyaA 4082163 - 4084709 + | adenylate cyclase TERM 5364 4084779 - 4084755 - T 79 -12.1 -3.25823 | CCGGGCCTACAGTAA GCCGGATAAGC AAA GCGCATCCGGC AAATAAATCAACGAA cyaY 4085107 - 4084787 - | frataxin-like protein SC3842 4085566 - 4085177 - | putative inner membrane protein TERM 5365 4085497 - 4085510 + g 95 -9.5 -4.6856 | opp_overlap 4085491, overlap 4085492 ATGAACCGATCCCCA CGCCC CGAA GGGCG TTTTTCAGATGTTTA SC3843 4085784 - 4085554 - | hypothetical protein SC3844 4086074 - 4085823 - | hypothetical protein TERM 5366 4086378 - 4086361 - g 74 -3.3 -4.85599 | overlap 4086363 GCCAGCCGATAAAAA TGCGCCG CCGC CGACGAA AAAAGTCGATTCGCA yifL 4086260 - 4086463 + | putative outer membrane lipoprotein dapF 4086500 - 4087324 + | diaminopimelate epimerase yigA 4087321 - 4088028 + | hypothetical protein xerC 4088025 - 4088927 + | site-specific tyrosine recombinase XerC TERM 5367 4089339 - 4089311 - g 82 -5.2 -5.0133 | overlap 4089313 4089334 CAGCTTGCGAAAAAA TGGCCGCTGGTG GCGAT CACTAACGGCAA CGCCCAGCCGGAACT yigB 4088927 - 4089643 + | flavin mononucleotide phosphatase TERM 5368 4089733 - 4089744 + F 87 -7.2 -5.1166 | opp_overlap 4089717 4089732, overlap 4089719 4089718 CCCCGGTAAGCGAAG CGCC ACCG GGCG TTTTTAGTTTTCATG TERM 5369 4091148 - 4091123 - g 100 -11.8 -4.8048 | opp_overlap 4091134 TTGTTACAGGAAAAA GCCCTGGCCG GGCGTG CGGCCAGCGC GCTGCAACGCTTTAT uvrD 4089779 - 4091941 + | DNA-dependent helicase II TERM 5370 4092454 - 4092442 - g 85 -2.6 -5.47399 | TCAACTGGAAAAAAA CCGA CTGAC CCGG CTGGAAGTCGAGGAG corA 4092413 - 4093363 + | magnesium/nickel/cobalt transporter CorA TERM 5371 4093399 - 4093366 - T 89 -11.1 -4.08692 | gap 1, opp_overlap 4093365 4093374, overlap 4093368 4093370 GAACTGGCTGTAAAA TATACGGACTGGCGAT TTA ACCGCCAGTCCGT-TG GAAGTTCTTCATCAT TERM 5372 4093398 - 4093368 - T 100 -16.2 -3.63922 | opp_overlap 4093365 4093374, overlap 4093366 4093370 ACTGGCTGTAAAATA TACGGACTGGCGAT TTA ACCGCCAGTCCGTT GGAAGTTCTTCATCA TERM 5373 4093396 - 4093370 - T 100 -18.8 -3.39908 | opp_overlap 4093365 4093374, overlap 4093368 4093366 TGGCTGTAAAATATA CGGACTGGCGAT TTA ACCGCCAGTCCG TTGGAAGTTCTTCAT SC3852 4093791 - 4093411 - | hypothetical protein TERM 5374 4093785 - 4093795 + g 78 -2.6 -5.1615 | TATCTTTAATAATCC TAAT CAT ATTA TTTTTTCCATATTGA SC3853 4093948 - 4094262 + | hypothetical protein TERM 5375 4094299 - 4094263 - T 95 -11.8 -4.34486 | opp_overlap 4094265 4094270, overlap 4094265 4094270 ACTAAGAAGAAATAA CATAAAATGGCAGCCA GATAA TAGCTGCCATTTTATT ATTTAATGCTTACGC TERM 5376 4094265 - 4094297 + T 95 -12.2 -4.04927 | opp_overlap 4094263 4094265 4094270, overlap 4094270 TAAGAAGAAATAACA TAAAATGGCAGCCA GATAA TAGCTGCCATTTTA TTATTTAATGCTTAC TERM 5377 4094297 - 4094265 - T 100 -14.4 -3.75532 | opp_overlap 4094265 4094270, overlap 4094263 4094270 TAAGAAGAAATAACA TAAAATGGCAGCCA GATAA TAGCTGCCATTTTA TTATTTAATGCTTAC TERM 5378 4094270 - 4094292 + T 88 -7.7 -5.02606 | opp_overlap 4094265 4094263 4094270, overlap 4094265 AGAAATAACATAAAA TGGCAGCCA GATAA TAGCTGCCA TTTTATTATTTAATG TERM 5379 4094292 - 4094270 - T 100 -9.9 -4.86029 | opp_overlap 4094270 4094265, overlap 4094265 4094263 AGAAATAACATAAAA TGGCAGCCA GATAA TAGCTGCCA TTTTATTATTTAATG rarD 4095189 - 4094302 - | chloramphenicol resistance TERM 5380 4094357 - 4094346 - G 71 -5.8 -4.3129 | CATCCATCACGAAAA TCGC CAGC GCGA CCCAGATAAACGCAA TERM 5381 4094449 - 4094431 - G 70 -3.1 -4.72986 | overlap 4094433 CACCGCCAGTAAAAA CATCAGC GTTGG GCCGATA TACTGGAAAAAGCCC yigI 4095700 - 4095233 - | hypothetical protein pldA 4095865 - 4096734 + | phospholipase A TERM 5382 4096769 - 4096790 + F 100 -12.3 -4.63479 | TTGCAGTTTCTCTCG CAGGCGCTG AAAA TAGCGCCTG TTTTGATTTATGGTG TERM 5383 4097691 - 4097701 + G 70 -6.8 -4.13945 | overlap 4097686 CTGCAAATCGTGGTG GCGA CCG TCGC TTTTGGAATGGGCAT TERM 5384 4098540 - 4098514 - g 71 -7.3 -4.04206 | gap 1, opp_overlap 4098517, overlap 4098497 CCACGTTGATAGAAA TGGCGG-AACAG ATGC CGGTTTCCGCCA GCGAGATGTTAAGCG recQ 4096800 - 4098647 + | ATP-dependent DNA helicase RecQ rhtC 4098711 - 4099331 + | threonine efflux system rhtB 4099991 - 4099371 - | homoserine/homoserine lactone efflux protein TERM 5385 4100555 - 4100596 + G 100 -13.8 -3.98159 | gap 2, overlap 4100591 CTGTTCCTGCAACGC CATCGTGTGCGGTGCGACGC TATT GCG-CTCACCGCGC-CGATG TTTGGTATTGTGATA pldB 4100006 - 4101118 + | lysophospholipase L2 yigL 4101134 - 4101934 + | putative sugar phosphatase TERM 5386 4102204 - 4102181 - gT 76 -5.2 -4.78149 | GGCACAACCTAAAAA CCATCAGCCT GTAT ATGCTGGTGG GGGCGATGCAGCTTG metR 4103755 - 4102802 - | metE/metH transcriptional regulator yigM 4102015 - 4102914 + | paral putative transport protein TERM 5387 4103201 - 4103189 - Gf 72 -9.1 -3.51708 | opp_overlap 4103197, overlap 4103185 CACCGGGTAAATCAA CAGCG TTT CGCTG GCTAAATCTTCCGGC TERM 5388 4105197 - 4105186 - g 86 -7.2 -4.82901 | overlap 4105187 4105188 GCCGCGGTAGAAAAA CGCC TGGC GGCG ATCACCGCGCAGGAC metE 4104004 - 4106268 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 5389 4106304 - 4106332 + T 79 -12.5 -2.90688 | gap 1, opp_overlap 4106302 TATCCGGCAGCAATG C-GGCGCTACCC TTTGAC GGGTAGCGCCCG TGTCTGACCTGATTA TERM 5390 4106482 - 4106494 + T 72 -4.7 -4.67982 | opp_overlap 4106485 ATAGCGTCCCCGGAA GCAGC GCG GCGGC TTTTATTGCCTCGCA TERM 5391 4107942 - 4107928 - T 86 -2.8 -5.72118 | AAAAAATATAAAAAA TGCTGT GGT AAAGCA TAGCTAACGTGGCGA dlhH 4108837 - 4108025 - | dienelactone hydrolase family protein TERM 5392 4108421 - 4108404 - G 76 -2.7 -5.06414 | gap 1, overlap 4108405 CCTCCCCAACAAAAA CCGG-TGA TCA TCAGCCGA TGCGCATCCCCGCCG TERM 5393 4108672 - 4108687 + g 71 -6 -4.35116 | opp_overlap 4108668 4108661, overlap 4108669 CAATGACCACAGGCA GCGCGC CGTC GCTCGC TTTTGGTCTGGCGTA TERM 5394 4108956 - 4108969 + H 76 -5.3 -4.78107 | TATTGATTATTTATT GTGAT GTGC ATCAC TTTTTAATGGTAATC udp 4109096 - 4109857 + | uridine phosphorylase TERM 5395 4109872 - 4109898 + F 95 -10.9 -4.65895 | opp_overlap 4109877, overlap 4109877 ATTCTCCTCTCTTTT GCAAAGGCCGA CGCGT TCGGCCTTTTC TTTTTGCGTGGCGCC TERM 5396 4109893 - 4109877 - f 72 -9.4 -3.53012 | opp_overlap 4109872 4109877 CCTCTCTTTTGCAAA GGCCGA CGCGT TCGGCC TTTTCTTTTTGCGTG TERM 5397 4109877 - 4109893 + F 100 -9.4 -5.2853 | opp_overlap 4109877, overlap 4109872 CCTCTCTTTTGCAAA GGCCGA CGCGT TCGGCC TTTTCTTTTTGCGTG yigN 4109997 - 4111427 + | DNA recombination protein RmuC TERM 5398 4111591 - 4111604 + G 72 -2.3 -4.96646 | AGAGCAGAAAGCTGA CATGG TGGC CCACG TTTTTCATTCTGTGG ubiE 4111523 - 4112278 + | ubiquinone/menaquinone biosynthesis methyltransferase yigP 4112288 - 4112893 + | hypothetical protein TERM 5399 4114182 - 4114172 - g 77 -8.2 -4.08767 | opp_overlap 4114172 TTGATTTGTGGAAAA CGGC GAA GCCG TTTCTTGAGTCCTGG TERM 5400 4114172 - 4114182 + G 77 -8.2 -4.21974 | opp_overlap 4114172 TTGATTTGTGGAAAA CGGC GAA GCCG TTTCTTGAGTCCTGG ubiB 4112890 - 4114530 + | putative ubiquinone biosynthesis protein UbiB tatA 4114736 - 4114990 + | twin argininte translocase protein A tatB 4114994 - 4115542 + | sec-independent translocase TERM 5401 4115735 - 4115745 + G 80 -4.6 -5.04385 | overlap 4115725 4115724 TGATTGCGACGGATG TGGC GTC GCCG TTTTTTACGCCTATC tatC 4115545 - 4116324 + | TatABCE protein translocation system subunit TERM 5402 4116351 - 4116326 - f 95 -13.3 -3.94184 | opp_overlap 4116328 4116331, overlap 4116328 ACACTGAAGACTAAA CACAACCGCCC GCCA GGGCGGTTGTC ATATGGGGGCAAGCA TERM 5403 4116328 - 4116349 + F 90 -15.9 -2.62184 | opp_overlap 4116328 4116326, overlap 4116331 ACTGAAGACTAAACA CAACCGCCC GCCA GGGCGGTTG TCATATGGGGGCAAG TERM 5404 4116349 - 4116328 - f 100 -15.9 -3.55486 | opp_overlap 4116328 4116331, overlap 4116326 ACTGAAGACTAAACA CAACCGCCC GCCA GGGCGGTTG TCATATGGGGGCAAG TERM 5405 4116331 - 4116346 + F 82 -11.8 -3.46602 | opp_overlap 4116328 4116326, overlap 4116328 GAAGACTAAACACAA CCGCCC GCCA GGGCGG TTGTCATATGGGGGC yigW 4116366 - 4117148 + | DNase TatD rfaH 4117644 - 4117156 - | transcriptional activator RfaH TERM 5406 4117512 - 4117532 + g 76 -3.2 -5.02074 | overlap 4117513 GCGGTTCGCTGACGG AGGTACGT TTTCC GCGTACCA TTTTTTCCAGGGTGA TERM 5407 4117802 - 4117776 - H 75 -3 -5.13741 | overlap 4117781 CTAATTTAACAAAAA TACAGCATCC CGATGAT GAACGCCGTA TAATGATGCGCTTAC yigC 4117830 - 4119308 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 5408 4119376 - 4119358 - f 74 -6 -4.56775 | opp_overlap 4119322 ACTCGGCTTGAAAAA TGTCGG TATTGAC CCGACA CCCGACAGAGGGAGC TERM 5409 4119464 - 4119477 + G 73 -5.9 -4.41047 | overlap 4119465 ATCGGGTTCGTTTAG TGCCG GACG CGGCG TTTTCATTCCGCGCT fre 4119394 - 4120095 + | FMN reductase TERM 5410 4120105 - 4120122 + F 100 -12.7 -4.74504 | ATTTAACTATTTTAT GGGACGC AGTA GCGTCCC TTTTTACGTTAGCCT TERM 5411 4120511 - 4120546 + G 72 -11.2 -3.06915 | overlap 4120509 4120515 CCCTATGATATCGCG CCGCTAACCGCCGTTA TTCG TAATGGCGGTTACCAG TTACGTGACGTGCAT TERM 5412 4121080 - 4121059 - g 74 -2.9 -4.86731 | GGGCTTTAAACAAAA CCAGGATGG CGCA CTATCGTGG GGCTACGGTCAGCGT TERM 5413 4121706 - 4121682 - g 74 -2.1 -5.12707 | gap 1 GCAAAGGCCAAAAAA TCGCCTGCCA GGACAG TGGCTG-CGA GGGTGACTTCGACTG SC3878 4120349 - 4122172 + | putative cytoplasmic protein TERM 5414 4122213 - 4122195 - T 100 -13.1 -5.04385 | CATACGGTGAAAAAA CCCGCCC CTGAC GGGCGGG AAAAACGGCAACTAA TERM 5415 4122279 - 4122312 + T 100 -21.1 -3.09933 | TGGCTGCCTTTGCTC ACCCCGGGCACATAG TTAT CTATGTGCCCGGGGA TTCGCTCAGTTGCCG fadA 4123532 - 4122369 - | 3-ketoacyl-CoA thiolase TERM 5416 4123213 - 4123199 - G 70 -7 -4.1347 | CGCCAACCAGACAAA CCTGCG CAT CGCCGG TCATGATCATTCGCG fadB 4125731 - 4123542 - | multifunctional fatty acid oxidation complex subunit alpha TERM 5417 4124112 - 4124144 + g 72 -4 -4.69027 | gap 1, opp_overlap 4124116 4124118 ACCCACCACGTCGAG CAGATAGGCCGGGCC CATC GGCCAG-CCGAACTG TTTTTCCATCACTTT pepQ 4125921 - 4127252 + | proline dipeptidase yigZ 4127252 - 4127866 + | hypothetical protein TERM 5418 4128144 - 4128165 + F 84 -7.9 -4.77173 | overlap 4128145 GTTCTGGACCGTGCT GGGCAGCGT GGGT GCGCTGCCG TTTATTTTCTCGGAA TERM 5419 4128145 - 4128164 + F 79 -11.4 -3.45581 | overlap 4128144 TTCTGGACCGTGCTG GGCAGCGT GGGT GCGCTGCC GTTTATTTTCTCGGA hemG 4129368 - 4129913 + | protoporphyrinogen oxidase TERM 5420 4132224 - 4132187 - T 77 -3.4 -5.14563 | opp_overlap 4132189 4132217, overlap 4132189 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TGCTCTTTAAAAATC TERM 5421 4132286 - 4132262 - T 71 -8 -3.92659 | gap 1, opp_overlap 4132262 4132269, overlap 4132266 4132272 TGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5422 4132838 - 4132826 - T 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5423 4135462 - 4135511 + T 100 -22.5 -2.7035 | opp_overlap 4135466 4135471, overlap 4135466 4135471 4135476 GGAACTGCCAGGCAT CAAATAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTATCTG TAGTCTGTCGGTGAG TERM 5424 4135466 - 4135507 + T 100 -21.9 -2.99545 | opp_overlap 4135466 4135471, overlap 4135462 4135471 4135476 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTAGTCTGTCGG TERM 5425 4135507 - 4135466 - T 100 -17.5 -3.76224 | opp_overlap 4135466 4135462 4135471 4135476, overlap 4135471 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTAGTCTGTCGG TERM 5426 4135471 - 4135502 + T 100 -17.4 -4.63586 | opp_overlap 4135466 4135471, overlap 4135466 4135462 4135476 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTAGTCT TERM 5427 4135502 - 4135471 - T 100 -13 -4.9448 | opp_overlap 4135471 4135466 4135462 4135476, overlap 4135466 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTAGTCT TERM 5428 4135476 - 4135497 + T 100 -15.9 -5.24647 | opp_overlap 4135471 4135466, overlap 4135471 4135466 4135462 TCAAATAAAACGAAG GGCCCTGTC GGAA GACAGGGCC TTTTGTTTTATCTGT TERM 5429 4135562 - 4135548 - T 71 -7.8 -3.99324 | opp_overlap 4135548 CCTGAGGAGGACAAA TCCGCC GGG AGCGGA TTTGAACGTTGCGCA TERM 5430 4135645 - 4135664 + T 100 -9.2 -5.1287 | opp_overlap 4135645 CAATTTAGTGAAGAA GCCCATCC GTCA GGACGGGC TTTTTTGCGTGTGCG TERM 5431 4135664 - 4135645 - T 86 -11.4 -3.69283 | opp_overlap 4135645 CAATTTAGTGAAGAA GCCCATCC GTCA GGACGGGC TTTTTTGCGTGTGCG TERM 5432 4135751 - 4135707 - T 79 -11.4 -3.30243 | gap 1, opp_overlap 4135707 4135741, overlap 4135697 4135694 ATGTAGGCCTGATAA GCGCAG-CGCCATCAGGCAAC CGGC ACCGCCGGATGGCGGCTCCGC CTTATTCGGCCTACA mobB 4136292 - 4135762 - | molybdopterin-guanine dinucleotide biosynthesis protein B mobA 4136858 - 4136274 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 5433 4136471 - 4136451 - G 70 -9.7 -3.41693 | overlap 4136448 4136447 GGCACGATTAATCAA CGCGATCGT TGG ATGATCGCG CTCTCCATCATGAAC yihD 4136928 - 4137197 + | hypothetical protein TERM 5434 4137806 - 4137787 - g 87 -8.6 -4.56597 | CCCTCCGGGCAAAAA GCGGCTTT CCTG AAAGCCAC TGATACTCTACTGTC TERM 5435 4138174 - 4138152 - g 91 -7.7 -5.00616 | opp_overlap 4138151 TGCGTTTCCAAAAAA CTTTCCCTG GTTAA CAGGGGAAG ATTACTGGCAGCGAC yihE 4137274 - 4138260 + | serine/threonine protein kinase TERM 5436 4138391 - 4138405 + G 82 -5.6 -5.01535 | overlap 4138393 4138402 CCGGTCGCTGGCGAA CCCCAG GTA CTGGAG TTTTTCTCCTTCTAC TERM 5437 4138495 - 4138480 - g 80 -4.6 -5.10208 | overlap 4138482 CAATGTGAAGAAAAA GCTGCC GGAA GGCACC AAAATGACCAAGTAC dsbA 4138277 - 4138900 + | periplasmic protein disulfide isomerase I TERM 5438 4138928 - 4138904 - f 100 -14.3 -5.8096 | opp_overlap 4138907, overlap 4138907 GATAAAAAATAAAAA GAACGCCGGTC ACT GACCGGCGTTT TTATAAGATGTTTTA TERM 5439 4138907 - 4138925 + F 100 -16 -4.87273 | opp_overlap 4138907 4138904 AAAAAATAAAAAGAA CGCCGGTC ACT GACCGGCG TTTTTATAAGATGTT TERM 5440 4138925 - 4138907 - f 100 -16 -4.8855 | opp_overlap 4138907, overlap 4138904 AAAAAATAAAAAGAA CGCCGGTC ACT GACCGGCG TTTTTATAAGATGTT TERM 5441 4142022 - 4142011 - g 83 -7.2 -4.63486 | overlap 4142012 AGCCGCTGAAGAAAA CGCC TGGC GGCG CGCCGTCAACGTCGG TERM 5442 4142735 - 4142702 - g 74 -11.5 -3.25802 | overlap 4142698 4142695 4142694 TATTAAATCCAGCAA CGCGGCGCGGCGCGC GGGG GCGGAACGCGCGGCG ATCAATGCTCCCATG polA 4140207 - 4142993 + | DNA polymerase I TERM 5443 4143218 - 4143244 + G 100 -18.1 -5.55769 | opp_overlap 4143211 GCTGAATATTTTAGC CGCCCCAGTCA GTTTA TGACTGGGGCG TTTTTTATTGTGCGC SC3892 4143200 - 4143343 + | hypothetical protein yihA 4143960 - 4143328 - | GTPase EngB TERM 5444 4143645 - 4143621 - G 71 -6.3 -4.29738 | opp_overlap 4143621 GGATATCCATTAAAA CGACTAAGCCC TGT AGGCTTTGACG TTTCTCCAGATATTC TERM 5445 4143781 - 4143809 + g 81 -2.3 -5.30155 | overlap 4143771 AATCAGTTGGGTACG GCCCGGCGT TTTAGAGGTGC GCGCCAGGC TTTTTTGGTTGGTCA TERM 5446 4144331 - 4144320 - g 71 -5.8 -4.23674 | opp_overlap 4144320, overlap 4144316 TGTCAGGAAGACAAA CGTC CGGA GACG TTAGTAAAAGGAAAT SC3894 4144200 - 4144424 + | putative cytoplasmic protein TERM 5447 4144430 - 4144483 + F 100 -19.9 -3.99405 | opp_overlap 4144446, overlap 4144446 AACCCGTTAAGGGTC GTGAGTCAAGAAAAAAGGCGGCAGA TTAC TCTGTCGCCTTTTTTCTTTGCTTGC TTTCTGCTAGATTCC TERM 5448 4144467 - 4144446 - f 100 -10.1 -5.4833 | opp_overlap 4144430 4144446 TGAGTCAAGAAAAAA GGCGGCAGA TTAC TCTGTCGCC TTTTTTCTTTGCTTG TERM 5449 4144446 - 4144467 + F 100 -12.3 -5.72053 | opp_overlap 4144446, overlap 4144430 TGAGTCAAGAAAAAA GGCGGCAGA TTAC TCTGTCGCC TTTTTTCTTTGCTTG yihI 4144543 - 4145058 + | hypothetical protein hemN 4145247 - 4146620 + | coproporphyrinogen III oxidase glnG 4148342 - 4146933 - | nitrogen regulation protein NR(I) TERM 5450 4147390 - 4147372 - G 80 -4.4 -5.03314 | opp_overlap 4147372, overlap 4147374 GCGACCTGCAAAAAA TGGCGCGC CAG GCGCGGAA TATCCTCACGGCGTT glnL 4149400 - 4148351 - | nitrogen regulation protein NR(II) TERM 5451 4148759 - 4148743 - G 70 -10.1 -3.31322 | opp_overlap 4148741 CGTAATCGCGGATAA GCCGGAC ATT ATCCGGC AGTTCCATCGACACC TERM 5452 4148946 - 4148972 + g 80 -4.9 -5.01811 | overlap 4148947 TTGCTGAGTAGCTGC GCCGCGCCGCG CAGGC CGCCGAGCGGA TTTTTGATTTCGTGC TERM 5453 4149513 - 4149496 - R 100 -11.3 -5.24129 | TTGGTGGAGAAAAAA GCCCATC CAGG GATGGGC TGAAAGTTTCCACGG glnA 4151084 - 4149675 - | glutamine synthetase TERM 5454 4150297 - 4150307 + g 70 -6.8 -4.13945 | CCGGAACCGTTATCG CCGA ACA TCGG TTTTGGCATAAAGGT TERM 5455 4151298 - 4151270 - H 72 -6.2 -4.2558 | gap 1, opp_overlap 4151254 4151261, overlap 4151272 4151293 TATGTTGCACCAAAA TAGTGCTTCAATG TGAA CATT-AAGCACCA CATTGGTGCAATAGA TERM 5456 4151307 - 4151293 - H 73 -10 -3.37959 | overlap 4151272 4151270 CAATGTGAACATTAA GCACCA CAT TGGTGC AATAGAACGCAAGCC typA 4151460 - 4153283 + | GTP-binding protein TERM 5457 4153332 - 4153306 - T 88 -8.6 -4.87665 | opp_overlap 4153306 TCTTACGGATAAAAA CCCTGCCGAAAT GAA AACTCGGCGGGG TTTTTTTATTCACAT TERM 5458 4153306 - 4153332 + T 100 -8.7 -5.80364 | opp_overlap 4153306 TCTTACGGATAAAAA CCCTGCCGA AATGAAAAC TCGGCGGGG TTTTTTTATTCACAT ybhA 4154072 - 4153338 - | putative hydrolase TERM 5459 4153388 - 4153375 - G 74 -2.3 -5.01732 | overlap 4153376 AAGGTTGCCAAAAAA TCAGC AATC GCTGG CGTATTATGCCGACC SC3902 4154935 - 4154057 - | putative inner membrane protein TERM 5460 4154261 - 4154245 - G 75 -3.6 -4.94972 | overlap 4154238 TATGACAAGCAAAAA GATCGC CTTCT GCGTTC ATAAAAATACTTTTT TERM 5461 4154804 - 4154818 + g 100 -9.2 -5.37345 | opp_overlap 4154794, overlap 4154793 AACCATGCGCCATAG CGCGGC TTC GTCGCG TTTTTTATCGTTACG hemN 4156173 - 4154932 - | coproporphyrinogen III oxidase SC3904 4157050 - 4156175 - | putative membrane-associated, metal-dependent hydrolase TERM 5462 4156644 - 4156668 + g 72 -2.1 -4.91459 | opp_overlap 4156638 CCGCCAATACAGATG GTCTGGTAG CCTTTAT TTTCCAGAC TTTTTATCCATGTTG SC3905 4158068 - 4157043 - | putative periplasmic protein TERM 5463 4157731 - 4157741 + g 91 -6.8 -5.24129 | opp_overlap 4157727, overlap 4157721 TGTTCCAGTAAGCGC CGCT TGC AGCG TTTTTTATCCAACAG TERM 5464 4157836 - 4157824 - G 76 -3.4 -5.00884 | ATGTTCTGCAAAAAA TGGA TATAG TCCA GACCGATCGCGTTTA SC3906 4158929 - 4158081 - | putative cytoplasmic protein TERM 5465 4159051 - 4159031 - R 72 -10.4 -2.80195 | opp_overlap 4159031, overlap 4159028 ATTCAGGATGAATGA GCGGGCAG AACAA CTACCCGC TGTGATGCAGATTCG yshA 4159838 - 4159086 - | outer membrane porin L TERM 5466 4159319 - 4159302 - G 70 -2.8 -4.81863 | AAAGGTATAAGAAAA TTTATC GGTAAT GATAAA ATTCCAATAGTTACC yihO 4161267 - 4159846 - | GPH family transport protein TERM 5467 4161278 - 4161301 + r 78 -5.2 -5.00467 | opp_overlap 4161283, overlap 4161283 GACATAATCGCCTCT CAAAACGCCC CGCA GGGCGTTATA TTTTATTGTTGTTAA TERM 5468 4161283 - 4161296 + r 83 -9.5 -4.12416 | opp_overlap 4161283, overlap 4161278 AATCGCCTCTCAAAA CGCCC CGCA GGGCG TTATATTTTATTGTT TERM 5469 4161296 - 4161283 - R 83 -9.5 -4.08064 | opp_overlap 4161283 4161278 AATCGCCTCTCAAAA CGCCC CGCA GGGCG TTATATTTTATTGTT yihP 4162695 - 4161313 - | GPH family transport protein TERM 5470 4162329 - 4162343 + g 71 -4.2 -4.62336 | opp_overlap 4162327 4162324 4162329, overlap 4162330 ACAGCATAAACAGCA TCGTTG CGA CGACGG TTTTTCCCGTCACCT TERM 5471 4162706 - 4162738 + r 71 -9.8 -3.1577 | gap 1, overlap 4162704 4162708 CTCATTATTCTTCTC CATCT-GCCCGCAGG TTTC CCTGCGGGCGAGCCG TATTAGATATTCCGT yihQ 4164777 - 4162741 - | alpha-glucosidase TERM 5472 4162777 - 4162767 - G 76 -3.2 -5.04356 | GTAAAGAAGCAAAAA GTGA AGC CCAC TCGCTCTTCGCGCGA TERM 5473 4163511 - 4163524 + g 70 -9.5 -3.31461 | CGTTATGCATGATCT CGGCG CTGA CGCCG TTGTGCAGATACGTG TERM 5474 4164252 - 4164262 + g 95 -8.2 -4.89521 | overlap 4164250 AGGTCCAGTAATAGT CGCC GCC GGCG TTTTCTTTACAGTCT yihR 4165678 - 4164821 - | hypothetical protein TERM 5475 4165150 - 4165113 - G 95 -10.5 -4.60487 | opp_overlap 4165114 4165116, overlap 4165114 CATGATGCGGAAAAA TCCCTGCCTGCGAGCAA TTCT TCGCTTGCAGGCAGTGT TAATACACAGCTATC TERM 5476 4165114 - 4165149 + g 91 -14 -3.14683 | opp_overlap 4165114 4165113, overlap 4165116 ATGATGCGGAAAAAT CCCTGCCTGCGAGCAA TTCT TCGCTTGCAGGCAGTG TTAATACACAGCTAT TERM 5477 4165149 - 4165114 - G 95 -14 -3.3581 | opp_overlap 4165114 4165116, overlap 4165113 ATGATGCGGAAAAAT CCCTGCCTGCGAGCAA TTCT TCGCTTGCAGGCAGTG TTAATACACAGCTAT TERM 5478 4165116 - 4165147 + g 91 -15.2 -3.13522 | opp_overlap 4165114 4165113, overlap 4165114 GATGCGGAAAAATCC CTGCCTGCGAGCAA TTCT TCGCTTGCAGGCAG TGTTAATACACAGCT TERM 5479 4165367 - 4165339 - G 78 -6 -4.83169 | gap 1, opp_overlap 4165339, overlap 4165325 4165341 AGGGCGGCAGAAAAA TC-GTTAGCGACG CTTC CGTCGCCGACTGA TAATTAATCTGCCAG yihT 4167642 - 4166767 - | putative aldolase TERM 5480 4167456 - 4167442 - G 74 -10 -3.7511 | CTGGCGATAACAGAA CTGCTG ATC CAGCAG AACGGCAGAGGCATA yihU 4168560 - 4167685 - | putative oxidoreductase TERM 5481 4169408 - 4169394 - g 89 -9.2 -4.57341 | AACTGGTTGGAAAAA GCGGCG GTA CGCCAC CAACCGGGTTTTACC yihV 4168725 - 4169621 + | putative sugar kinase TERM 5482 4169926 - 4169907 - g 89 -3.4 -5.48063 | ACGCAAGAGAAAAAA GCCATTGC GGAA GCCGTGGC TGACTATATTCCGGA yihW 4169655 - 4170458 + | glycerol-3-phosphate regulon repressor TERM 5483 4170522 - 4170548 + F 79 -8 -4.3821 | overlap 4170523 AAAACGGCGCTGTGA TGCAGGCGATAT TGA ACATCGTCTGCG TTTCTATTGTCTTTT yihX 4170649 - 4171248 + | phosphatase rbn 4171242 - 4172114 + | ribonuclease BN TERM 5484 4172396 - 4172423 + G 71 -7.6 -4.01564 | gap 1, opp_overlap 4172385 CCAAGCTTTTCCGGC GGGGCTGCGC-CG GAT CGCGCGCAGGCGC TTTATGAATATTTTG yihZ 4172111 - 4172548 + | D-tyrosyl-tRNA deacylase yiiD 4172545 - 4173534 + | putative acetyltransferase bah 4174463 - 4173786 - | putative acetyl esterase SC3921 4174881 - 4174657 - | hypothetical protein TERM 5485 4174838 - 4174823 - GH 74 -4.6 -4.82901 | overlap 4174824 GCGGCCTGAGAAAAA TGCGCT GGGG AGCGCG AGGCAAAGGAAAGCG SC3922 4174861 - 4174992 + | hypothetical protein SC3923 4174993 - 4175283 + | MerR family regulatory protein fdhE 4176259 - 4175330 - | formate dehydrogenase accessory protein FdhE TERM 5486 4176207 - 4176188 - G 83 -10.7 -3.9461 | opp_overlap 4176188 4176185 TCGGGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG fdoI 4176891 - 4176256 - | formate dehydrogenase-O subunit gamma fdoH 4177790 - 4176888 - | formate dehydrogenase-O, Fe-S subunit TERM 5487 4177581 - 4177605 + g 74 -9.9 -3.63569 | TTTCGCGGTTAAGTC CGCCGGGTTGT CAT ACACCCCGACG TTATTGCCCACTTCA TERM 5488 4177873 - 4177898 + H 74 -3.9 -5.00616 | opp_overlap 4177873 4177885 GCATCACCGACGAAA GGCGTTAACGT ATTG GCGATAAAGCC TTTTTTCGCCACGCC TERM 5489 4178654 - 4178639 - H 79 -9 -4.09864 | overlap 4178643 AGCTACCGGCGAAAA TCCAGC AGCC GCTGGA CGTCGTACCGTCATC TERM 5490 4180055 - 4180045 - H 82 -6.8 -4.83169 | overlap 4180046 ATTGGCGCATAAAAA TCGG CCA CCGA CGCGGTACGCGTGAA TERM 5491 4181388 - 4181375 - g 71 -9.5 -3.53811 | TTTATGGGGCTGAAA GCGCG TCGT CGCGC GTTGGCCGGACGCAC fdhD 4181048 - 4181884 + | formate dehydrogenase accessory protein TERM 5492 4182059 - 4182077 + T 79 -10.2 -3.55761 | opp_overlap 4182061, overlap 4182061 TACTTCGAGCGAAAA AAGCGCCC TTG GGGCGCTC TTTCGACAGTCGCTA TERM 5493 4182075 - 4182061 - T 100 -12.8 -5.08824 | opp_overlap 4182059 4182061 CTTCGAGCGAAAAAA GCGCCC TTG GGGCGC TCTTTCGACAGTCGC TERM 5494 4182061 - 4182075 + T 85 -12.8 -3.35597 | opp_overlap 4182061, overlap 4182059 CTTCGAGCGAAAAAA GCGCCC TTG GGGCGC TCTTTCGACAGTCGC SC3928 4183180 - 4182149 - | putative inner membrane lipoprotein TERM 5495 4182371 - 4182357 - G 70 -2.8 -4.71828 | opp_overlap 4182357 AGGCGATCAATAAAA CCAG GGAAATG CTGG TGTTTATCCATATCA TERM 5496 4184383 - 4184362 - g 71 -4.3 -4.65933 | overlap 4184363 4184364 GATTTTGAAAAGAAA CGGGTGCAG GACC CTGCAACAG GATGGATGGTTGCGG yiiG 4183363 - 4184463 + | putative cytoplasmic protein TERM 5497 4184548 - 4184534 - T 100 -8.5 -5.10208 | opp_overlap 4184534 TAACGCCAATAAAAA GCGCC GATCA GGCGC TTTTTTCGTTCATGT TERM 5498 4184534 - 4184548 + T 100 -8.5 -5.31059 | opp_overlap 4184534 TAACGCCAATAAAAA GCGCC GATCA GGCGC TTTTTTCGTTCATGT TERM 5499 4184644 - 4184633 - T 70 -2.2 -4.9218 | GAGCTATTAGAAAAA CCAG TAAT CTGA AGCTATCACAAGATG SC3930 4185141 - 4184818 - | hypothetical protein SC3931 4185800 - 4185141 - | hypothetical protein TERM 5500 4186138 - 4186121 - g 79 -3.3 -5.28176 | gap 1 CGCAGGTACAAAAAA CGCAGGTG ATT CGCC-GCG GAGAAGGCACCAAAG SC3932 4185835 - 4186449 + | hypothetical protein TERM 5501 4186536 - 4186500 - T 100 -9.4 -5.49579 | gap 1, overlap 4186501 CGACAAAAAATAAAA CCGTAGGCCCGGTAAGC TTGC GCC-ACCGGGCACACGA CTTACTGCAGATAGA TERM 5502 4186535 - 4186501 - T 84 -10.7 -3.87307 | gap 1, overlap 4186500 GACAAAAAATAAAAC CGTAGGCCCGGTAAGC TTGC GCC-ACCGGGCACACG ACTTACTGCAGATAG yiiL 4186852 - 4186538 - | hypothetical protein adh2 4187997 - 4186849 - | putative iron-containing alcohol dehydrogenase TERM 5503 4187569 - 4187617 + g 70 -3.1 -4.81249 | overlap 4187568 4187566 4187570 4187601 GTTGCTGGTCATCTC TGCCGCGGTACCTGC-CGTAGTG TTAAT CGCTACCAGC-GGTACGCCGGCG TTTTTCACTTTGCCG rhaD 4188951 - 4188124 - | rhamnulose-1-phosphate aldolase TERM 5504 4189058 - 4189009 - R 73 -11.5 -2.57931 | opp_overlap 4188994 4188992 4189008 4189053, overlap 4189008 CGTAGGCCGGATAAG CGCAGCGCCATCCGGCAAT CGTGTTTCATTT ATTGCCGGATGGTGACGCG GGCGTCTTATCCGGC rhaA 4190353 - 4189094 - | L-rhamnose isomerase TERM 5505 4189301 - 4189312 + g 100 -7.2 -5.27779 | opp_overlap 4189299, overlap 4189299 GGGTTCCAGCAGAGC GCGC AGCA GCGC TTTTTTCATGTTGCG TERM 5506 4189978 - 4189950 - G 91 -7.3 -4.91511 | opp_overlap 4189950, overlap 4189965 4189966 AGTGGATGAGAAAAA CAGGTGGGGTTGA AAT CCAGCCCCAGCCG GTTCGCTTTCGCCCA rhaB 4191819 - 4190350 - | rhamnulokinase rhaS 4192107 - 4192943 + | transcriptional activator RhaS TERM 5507 4193171 - 4193183 + G 75 -6.3 -4.57073 | ACGGTTGCCGATCGC TATCC ACA GGATA TTTTTGCGGAACATA TERM 5508 4193928 - 4193895 - g 74 -10.3 -3.55444 | opp_overlap 4193904 TGTTCACGCGGGAAA CCGGGATGACGCC GAGCCAAT GGCGTCATCTCAG TAATCAAAGCGATTA rhaR 4193096 - 4193944 + | transcriptional activator RhaR rhaT 4194975 - 4193941 - | rhamnose-proton symporter TERM 5509 4194566 - 4194555 - Gf 75 -3.6 -4.84359 | TCAGCGCGACAAAAA CGCC AAGT AGCG TCATGCGTCCCCCTT SC3941 4194940 - 4195110 + | hypothetical protein TERM 5510 4195407 - 4195390 - fH 70 -4.9 -4.40184 | TCAATGAAATATAAA TATAAGG AAAT CCCTATA TTGGCGTTGTTGATG TERM 5511 4195608 - 4195618 + G 76 -5.4 -4.78753 | overlap 4195610 AATGGATTCTGTTAT GAGA AAA TCTC TTTTCTTACTATTAC TERM 5512 4195871 - 4195883 + G 75 -6.9 -4.46212 | AAACCGGTGATGTCG CCTGG CAA CCGGG TTTTGTGCTGGAAAC yiiY 4195594 - 4196277 + | hypothetical protein TERM 5513 4196310 - 4196332 + T 100 -14.2 -5.82316 | TATTTATTCCCTTTT CCGGCTACTT TAT AGGTAGCCGG TTTTTTTTACCTGGT ygiK 4197743 - 4196436 - | putative C4-dicarboxylate transport system SC3944 4198251 - 4197736 - | putative C4-dicarboxylate transport system yiiZ 4199253 - 4198270 - | putative dicarboxylate-binding periplasmic protein TERM 5514 4199814 - 4199790 - g 87 -2 -5.626 | gap 1, overlap 4199806 4199807 CAGCGGACAAAAAAA CCGTACTGCGT AACA ACGCGGG-CGG CCACGCTAACCACAG sodA 4199582 - 4200202 + | superoxide dismutase TERM 5515 4200242 - 4200225 - f 77 -11.3 -3.29511 | opp_overlap 4200225 TGCACGTCTGTAGAA GCGAGTC TGAT GACTCGC TTTTTTTGTATCCGC TERM 5516 4200225 - 4200242 + F 100 -11.3 -5.71712 | opp_overlap 4200225 TGCACGTCTGTAGAA GCGAGTC TGAT GACTCGC TTTTTTTGTATCCGC yiiM 4200272 - 4200961 + | hypothetical protein SC3948 4200973 - 4201368 + | putative inner membrane protein TERM 5517 4201388 - 4201415 + T 100 -9.8 -4.75776 | opp_overlap 4201391, overlap 4201389 4201391 TGACGGCGAGATAAA AAATCGGCCTGC ATTC GCAGGCCGATGG TTTTTAGGTTCGCTT TERM 5518 4201389 - 4201414 + T 86 -13.3 -3.44381 | opp_overlap 4201391, overlap 4201388 4201391 GACGGCGAGATAAAA AATCGGCCTGC ATTC GCAGGCCGATG GTTTTTAGGTTCGCT TERM 5519 4201391 - 4201412 + T 100 -15.9 -3.28592 | opp_overlap 4201391, overlap 4201389 4201388 CGGCGAGATAAAAAA TCGGCCTGC ATTC GCAGGCCGA TGGTTTTTAGGTTCG TERM 5520 4201412 - 4201391 - T 100 -15.9 -5.36441 | opp_overlap 4201391 4201389 4201388 CGGCGAGATAAAAAA TCGGCCTGC ATTC GCAGGCCGA TGGTTTTTAGGTTCG cpxA 4202792 - 4201419 - | two-component sensor protein TERM 5521 4201734 - 4201749 + g 76 -10.4 -3.76125 | AACAATATTTTCCAG CGCGCT TTCC AGCGCG TTTGGGTTGCCATAG cpxR 4203487 - 4202789 - | DNA-binding transcriptional regulator CpxR TERM 5522 4203674 - 4203684 + G 76 -3.2 -5.00616 | GTTATGGCCTCAACG CTGG CAT TCAG TTTTTTAAGCCACGC TERM 5523 4203925 - 4203915 - g 71 -8.2 -3.79623 | AAAAATTTGATGAAA GCGC TGT GCGC GCTCAGGCAGAAAAA cpxP 4203638 - 4204138 + | periplasmic repressor CpxP TERM 5524 4204179 - 4204195 + F 100 -12.3 -6.02914 | ACCATCCCTGTCTTC CCCCACA TGA TGTGGGG TTTTTTTTATCTCCA fieF 4204285 - 4205187 + | ferrous iron efflux protein F pfkA 4205372 - 4206334 + | 6-phosphofructokinase sbp 4206538 - 4207527 + | sulfate transporter subunit TERM 5525 4207564 - 4207540 - gf 95 -12.9 -3.88583 | opp_overlap 4207540 TAAACCGTTTATAAA CCCGGTAACGT ATT ATGTTACCGGG TTTTTTCTTTGCCAC TERM 5526 4207540 - 4207564 + GF 100 -15.1 -5.63517 | opp_overlap 4207540 TAAACCGTTTATAAA CCCGGTAACGT ATT ATGTTACCGGG TTTTTTCTTTGCCAC ushB 4207493 - 4208383 + | CDP-diacylglycerol pyrophosphatase TERM 5527 4208415 - 4208450 + F 80 -12.8 -2.99649 | gap 1, overlap 4208419 TGTTCATTATCTTAT TGATTCTTATCCCGGTT TAA AACCGGGGTAAGA-TCG TGTCTATAAAAATAT TERM 5528 4208419 - 4208447 + F 95 -16.9 -2.72799 | overlap 4208415 CATTATCTTATTGAT TCTTATCCCGGTT TAA AACCGGGGTAAGA TCGTGTCTATAAAAA TERM 5529 4208515 - 4208472 - f 100 -14.2 -3.73294 | opp_overlap 4208473 4208476 4208482, overlap 4208473 4208476 4208482 TAAAAATATGTGAAA TCGATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGGT TAGTTACACTCTCTT TERM 5530 4208473 - 4208514 + F 100 -17.7 -3.37053 | opp_overlap 4208472 4208473 4208476 4208482, overlap 4208476 4208482 AAAAATATGTGAAAT CGATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGG TTAGTTACACTCTCT TERM 5531 4208514 - 4208473 - f 100 -17.7 -2.82892 | opp_overlap 4208473 4208476 4208482, overlap 4208472 4208476 4208482 AAAAATATGTGAAAT CGATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGG TTAGTTACACTCTCT TERM 5532 4208476 - 4208511 + F 100 -18 -2.84574 | opp_overlap 4208473 4208472 4208476 4208482, overlap 4208473 4208482 AATATGTGAAATCGA TCAAAAGATATAAAGG TATA CCTTTATATCTTTTGA TGGTTAGTTACACTC TERM 5533 4208511 - 4208476 - f 100 -18 -2.66098 | opp_overlap 4208476 4208473 4208482, overlap 4208473 4208472 4208482 AATATGTGAAATCGA TCAAAAGATATAAAGG TATA CCTTTATATCTTTTGA TGGTTAGTTACACTC TERM 5534 4208482 - 4208505 + F 91 -11.2 -4.37013 | opp_overlap 4208476 4208473 4208472 4208482, overlap 4208476 4208473 TGAAATCGATCAAAA GATATAAAGG TATA CCTTTATATC TTTTGATGGTTAGTT TERM 5535 4208505 - 4208482 - f 91 -11.2 -4.33165 | opp_overlap 4208482 4208476 4208473, overlap 4208476 4208473 4208472 TGAAATCGATCAAAA GATATAAAGG TATA CCTTTATATC TTTTGATGGTTAGTT yicJ 4208646 - 4209980 + | Na+:galactoside symporter family permease TERM 5536 4210173 - 4210183 + G 78 -6.8 -4.59773 | overlap 4210158 TGACGCCGGCCGCTT CCTG CGC CAGG TTTTTCAGGATAACG SC3957 4209991 - 4210950 + | aminoimidazole riboside kinase yegU 4210960 - 4212000 + | putative ADP-ribosylglycohydrolase TERM 5537 4212045 - 4212005 - f 70 -9.7 -3.06796 | gap 1, overlap 4211991 4212029 TCGCAGGGTAGCGAA TTCACCCTGCCGGGGACG GTAAAA CGTCCCCTGCTGG-CGAA GACGTGAGGTGCGCA TERM 5538 4212406 - 4212385 - g 81 -12.3 -3.55563 | gap 1 ACCGTATTCTGGAAA TCGCGC-CGC GCC GCGCGCGCGA CGCTCAGGCAGACGG farR 4212063 - 4212785 + | GntR family transcriptional regulator cdh 4212883 - 4213194 + | putative periplasmic protein SC3961 4213634 - 4213284 - | putative mannose-6-phosphate isomerase ydeV 4215240 - 4213648 - | autoinducer-2 (AI-2) kinase TERM 5539 4215037 - 4215055 + g 89 -8.9 -4.57569 | opp_overlap 4215037 4215048 TGCCTGACGGATACA CTGGCAA GCCAG TTGCCAG TTTTTGGCAAGATCA TERM 5540 4215113 - 4215086 - G 76 -12.8 -2.7556 | gap 1, overlap 4215083 4215074 AACTCCATCGAACCA GGCA-CATCCGGC ACG GCCAGATGCTGCC ATTCCGCTTGACCGA ydeW 4216286 - 4215327 - | putative transcriptional repressor TERM 5541 4217006 - 4217024 + H 72 -8.8 -3.56142 | overlap 4217020 AATTATGCGCGGCTT GATGCGCG ACT CGCGAATC TTAATTCTTGATGAG TERM 5542 4217881 - 4217911 + H 75 -6.2 -4.49958 | gap 1 TTATCAGCTGTTGCG CAGTATCGCG-CA ACAAAA TGTCGCGGTGCTG TTTATTTCCTCCGAT ydeY 4218070 - 4219113 + | sugar ABC transporter membrane subunit ydeZ 4219113 - 4220111 + | sugar ABC transporter membrane subunit TERM 5543 4220612 - 4220590 - g 73 -9.2 -3.88291 | opp_overlap 4220592 4220596, overlap 4220592 4220596 CATCAGGTGGACAAA GAGAAAGCGA AAG TCGCTTTCTT CTATTCCAGCCCAAC TERM 5544 4220592 - 4220610 + G 83 -11.8 -3.65812 | opp_overlap 4220590 4220592 4220596, overlap 4220596 TCAGGTGGACAAAGA GAAAGCGA AAG TCGCTTTC TTCTATTCCAGCCCA TERM 5545 4220610 - 4220592 - g 81 -11.8 -3.52906 | opp_overlap 4220592 4220596, overlap 4220590 4220596 TCAGGTGGACAAAGA GAAAGCGA AAG TCGCTTTC TTCTATTCCAGCCCA TERM 5546 4220606 - 4220596 - g 75 -6.8 -4.40003 | opp_overlap 4220592 4220596, overlap 4220592 4220590 GTGGACAAAGAGAAA GCGA AAG TCGC TTTCTTCTATTCCAG TERM 5547 4220596 - 4220606 + G 75 -6.8 -4.46073 | opp_overlap 4220596 4220592 4220590, overlap 4220592 GTGGACAAAGAGAAA GCGA AAG TCGC TTTCTTCTATTCCAG yneA 4220140 - 4221162 + | sugar ABC transporter periplasmic subunit yneB 4221191 - 4222066 + | aldolase yneC 4222110 - 4222439 + | autoinducer-2 (AI-2) modifying protein LsrG rpe 4222449 - 4223213 + | ribulose-phosphate 3-epimerase tpiA 4224072 - 4223305 - | triosephosphate isomerase yiiQ 4224784 - 4224185 - | hypothetical protein yiiR 4224882 - 4225310 + | hypothetical protein TERM 5548 4225437 - 4225463 + T 95 -12.3 -3.8381 | overlap 4225458 4225460 GTAATGTTCAGCCGT CATCTGCCCCG GTCGG CGGCGCAGATG TTTAGTCATCTGTCT fpr 4226162 - 4225416 - | ferredoxin-NADP reductase TERM 5549 4226238 - 4226217 - R 73 -10.9 -2.74122 | overlap 4226216 4226214 CGTCAGGAGAAAGAT TTCCAGCCC CGCG AGGCTGGAA GGCTCTAACTAACAA glpX 4227269 - 4226259 - | fructose 1,6-bisphosphatase II TERM 5550 4226521 - 4226535 + g 74 -4.9 -4.70169 | overlap 4226522 4226529 CGCGCCAGTTCCTGT TCGCC AATGC GGCGG TTTTCTTCGCTGTCG TERM 5551 4227333 - 4227362 + r 79 -9.3 -4.09685 | opp_overlap 4227333 4227330, overlap 4227345 GGAGGGAATAATTGA TGTGTGTGCGGAG TTGC CTCCGCACAAAGA TTTTGCCGGATGGCG glpK 4228889 - 4227381 - | glycerol kinase glpF 4229755 - 4228910 - | MIP channel, glycerol diffusion yiiU 4230154 - 4230393 + | hypothetical protein TERM 5552 4230613 - 4230584 - T 83 -13.7 -2.60808 | opp_overlap 4230591, overlap 4230591 ATCAGCGACAACGCA TAAAAAAGGCGCC TTAC GGCGCCTTTTTTG ATCACTCGATATCAA TERM 5553 4230606 - 4230591 - T 100 -11.8 -5.3236 | opp_overlap 4230591, overlap 4230584 ACAACGCATAAAAAA GGCGCC TTAC GGCGCC TTTTTTGATCACTCG TERM 5554 4230591 - 4230606 + T 100 -11.8 -5.1675 | opp_overlap 4230584 4230591 ACAACGCATAAAAAA GGCGCC TTAC GGCGCC TTTTTTGATCACTCG menG 4231100 - 4230615 - | ribonuclease activity regulator protein RraA menA 4232122 - 4231193 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 5555 4232158 - 4232141 - R 100 -11.3 -5.07486 | opp_overlap 4232128 TAGCGCCAATAAAAA TGGGGCT TTTC AGCCCCA TCAACAGTGATGAAA hslU 4233520 - 4232189 - | ATP-dependent protease ATP-binding subunit TERM 5556 4233020 - 4233034 + g 74 -2.1 -5.00884 | gap 1 CTCTTTATCGTCGAG CTG-GC CTTC GCGCAG TTTTTTGCGGAACGT TERM 5557 4233151 - 4233164 + g 80 -5.2 -4.87665 | CTTCCGCCAACTCTT CCGC ACGATA GCGG TTTTTCTCGATAGCC hslV 4234060 - 4233530 - | ATP-dependent protease peptidase subunit ftsN 4235147 - 4234152 - | essential cell division protein TERM 5558 4234214 - 4234224 + g 74 -3.2 -4.90525 | TCAGACGGTTAATGG TGCT GTC GGCA TTTTCTTTACCCTTA TERM 5559 4234654 - 4234684 + g 82 -11 -3.77607 | overlap 4234645 4234655 TGCTGCTGCTGCTGC TGCTGCTGCGCCTG ACG CTGGCGCTGTAGCG TTTGCTGGCGTTGTT TERM 5560 4234655 - 4234683 + g 75 -12.3 -2.85841 | overlap 4234654 4234645 GCTGCTGCTGCTGCT GCTGCTGCGCCTG ACG CTGGCGCTGTAGC GTTTGCTGGCGTTGT cytR 4236266 - 4235241 - | DNA-binding transcriptional regulator CytR TERM 5561 4235382 - 4235368 - G 80 -9.2 -4.20696 | opp_overlap 4235368 4235367 CGACCAATGTCAAAA CGCGGC TGC GCCACG GTTGTCAACGGAGGG priA 4238619 - 4236421 - | primosome assembly protein PriA TERM 5562 4237726 - 4237738 + g 74 -4.7 -4.81249 | opp_overlap 4237699 4237726 CGTGCCGATGACAAT CGCCG CTT CGCCG TTTTTCGCTTTCAGC TERM 5563 4238908 - 4238893 - g 71 -6.1 -4.28361 | GTAATGTTATCAAAA CCCAC TCTACC GTGGG TCACGACCTGAACCT rpmE 4238823 - 4239035 + | 50S ribosomal protein L31 TERM 5564 4239047 - 4239076 + F 100 -12.3 -4.52857 | opp_overlap 4239055, overlap 4239055 ATAAGTTACCGCCAG AAAAAAAAGCGCC GCAG GGCGCTTTTTTTG TTTTCTATGACCCGT TERM 5565 4239068 - 4239055 - f 100 -9.5 -5.93809 | opp_overlap 4239047 4239055 CCGCCAGAAAAAAAA GCGCC GCAG GGCGC TTTTTTTGTTTTCTA TERM 5566 4239055 - 4239068 + F 100 -9.5 -6.14618 | opp_overlap 4239055, overlap 4239047 CCGCCAGAAAAAAAA GCGCC GCAG GGCGC TTTTTTTGTTTTCTA SC3986 4239137 - 4239538 + | putative cytoplasmic protein TERM 5567 4240360 - 4240324 - g 100 -16.1 -3.54741 | opp_overlap 4240331, overlap 4240326 4240331 CACCAGGCCCTGAAA TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA GACAAAAAACTGTCA TERM 5568 4240358 - 4240326 - g 100 -16.5 -3.35046 | opp_overlap 4240331, overlap 4240324 4240331 CCAGGCCCTGAAATA CAAAACGCCCGATGA TGT TCATCAGGCGTTTTA CAGACAAAAAACTGT TERM 5569 4240331 - 4240353 + G 91 -12 -4.07568 | opp_overlap 4240331 4240326 4240324 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA TERM 5570 4240353 - 4240331 - g 100 -14.2 -4.78848 | opp_overlap 4240331, overlap 4240326 4240324 CCCTGAAATACAAAA CGCCCGATGA TGT TCATCAGGCG TTTTACAGACAAAAA yis2 4239709 - 4240392 + | putative integrase protein SC3988 4241058 - 4240396 - | putative outer membrane lipoprotein TERM 5571 4241214 - 4241237 + r 100 -16.8 -4.71222 | opp_overlap 4241212 TACGTTTTAACCATT CAGGCGGAAG TTGG CTTCCGCCTG TTTTACTTTTACTCT SC3989 4243049 - 4241259 - | putative arylsulfate sulfotransferase TERM 5572 4242169 - 4242186 + g 74 -2.1 -5.07652 | gap 1, overlap 4242161 4242172 GTATTGATGGTGTAT TTA-CCAT TTA ATGGATAA TTTTCTTTTGCGACA TERM 5573 4242897 - 4242881 - G 80 -9.3 -4.19238 | CTGTTAATGGGAAAA CGCCGCC GTA GGGGGCG ACATCGACCATACCT TERM 5574 4243497 - 4243471 - R 83 -6.5 -5.055 | opp_overlap 4243471 4243472, overlap 4243472 4243473 GGAATCGTTAAAAAA GCGCGGCCAGA GGCGT TCTGACCGCAT GCTTTGCTATCAGTA TERM 5575 4243496 - 4243472 - R 75 -10 -3.62577 | opp_overlap 4243472 4243471, overlap 4243471 4243473 GAATCGTTAAAAAAG CGCGGCCAGA GGCGT TCTGACCGCA TGCTTTGCTATCAGT TERM 5576 4243495 - 4243473 - R 74 -11.3 -2.76823 | opp_overlap 4243472 4243471, overlap 4243472 4243471 AATCGTTAAAAAAGC GCGGCCAGA GGCGT TCTGACCGC ATGCTTTGCTATCAG metJ 4243824 - 4243507 - | transcriptional repressor protein MetJ TERM 5577 4244940 - 4244911 - g 74 -2.1 -5.00616 | gap 1 CCGTTGGTGAAAAAA CTGTATCATCCGTC GCT GCCGGAAAAT-CAG GGGCATGAAATTGCC metB 4244089 - 4245249 + | cystathionine gamma-synthase TERM 5578 4246295 - 4246278 - g 81 -8.3 -4.25074 | GACCAAATTTTAAAA CGGGCGC AGGC GCGTCCG CTGGCAGTGGGCGTG TERM 5579 4246781 - 4246805 + G 86 -12.2 -3.78775 | opp_overlap 4246777 4246776, overlap 4246784 GAATTATGAAGGGCT GGATGCCAGC CGCGC GCTGGCATTC TTTGATGATGAAGCC TERM 5580 4246784 - 4246802 + G 83 -10.3 -4.0274 | opp_overlap 4246777 4246776, overlap 4246781 TTATGAAGGGCTGGA TGCCAGC CGCGC GCTGGCA TTCTTTGATGATGAA metL 4245252 - 4247684 + | bifunctional aspartate kinase II/homoserine dehydrogenase II SC3993 4248657 - 4247800 - | putative inner membrane protein SC3994 4249358 - 4248660 - | hypothetical protein SC3995 4249657 - 4249367 - | hypothetical protein SC3996 4251016 - 4249892 - | hypothetical protein TERM 5581 4250029 - 4250015 - G 77 -8.5 -4.2123 | TAGCCAGGTAACAAA GCGGC GACTA GCCGC CAGATTAACGGCGAC TERM 5582 4251321 - 4251294 - H 71 -10.7 -2.75844 | overlap 4251293 4251318 TTGCTGACGGTAAAC GCGATATTGGC GGTTGG GCCAATATCAC CACGCTGGTGAAGCA TERM 5583 4252126 - 4252110 - H 74 -3.6 -5.06414 | CGGCTGGAACAAAAA GCTCGA TAAAG TCGTGC AGCAAACGGTGGCCC TERM 5584 4252198 - 4252213 + H 84 -8.2 -4.56597 | overlap 4252172 TCGCTGGGGAATCTG GCGGCG GATG CGCTGC TTTTTACGGCGGGGA metF 4252902 - 4253792 + | 5,10-methylenetetrahydrofolate reductase TERM 5585 4253799 - 4253814 + F 87 -10.4 -4.1711 | opp_overlap 4253793 GGTTTATAACCTCCA GCTCCC TGCC GGGAGC TTTATTACACCTCAT TERM 5586 4254228 - 4254249 + G 70 -3 -4.71791 | gap 1 AACCGTGGTGGCCCG CCGAC-TGG GGCAG CTATGTCGG TTTGTTTATTCGTAT TERM 5587 4254612 - 4254599 - g 83 -9.5 -4.08692 | opp_overlap 4254608 GAAGCGCTGGCAAAA GCGCC GCTG GGCGC GACCGAGATGGGCCT katG 4253957 - 4256137 + | catalase; hydroperoxidase HPI(I) TERM 5588 4256153 - 4256184 + T 100 -15.2 -4.17491 | overlap 4256177 TCTGATGGGTTAATT CGTCAGCGGCTGCT ATTC GGTAGTCGCTGACG TTTTCCGCGTTTAAT yijF 4256818 - 4256195 - | putative periplasmic protein TERM 5589 4256911 - 4256889 - R 73 -2 -5.24129 | opp_overlap 4256889, overlap 4256907 4256909 GTGCGTGATAAAAAA GTCTATTTCA GGA CAAAATGGAC TGATTCCAGGCTATG TERM 5590 4257042 - 4257065 + r 86 -14 -3.15758 | opp_overlap 4257042, overlap 4257034 GTCAGCAAGCTGAAA TACTCCTGAC TATT GTCAGGAGTA TTGCTCAGACCTTAT TERM 5591 4257065 - 4257042 - R 100 -14 -3.67976 | opp_overlap 4257034 4257042 GTCAGCAAGCTGAAA TACTCCTGAC TATT GTCAGGAGTA TTGCTCAGACCTTAT gldA 4258174 - 4257077 - | glycerol dehydrogenase TERM 5592 4257522 - 4257532 + g 81 -6.8 -4.70626 | overlap 4257513 ACGTGCTGTTCGGCG GCCA ACA TGGC TTTTTCGCCTTCTTC talC 4258848 - 4258186 - | fructose-6-phosphate aldolase TERM 5593 4258695 - 4258705 + g 77 -8.2 -4.09685 | opp_overlap 4258687, overlap 4258687 ATAAAGTGCCTTCTT CGCC GAT GGCG TTTTGCAGCCTGGGC ptsA 4261360 - 4258859 - | general PTS family protein I TERM 5594 4260194 - 4260244 + g 87 -13.8 -3.18264 | overlap 4260179 4260239 4260241 TTGCGCCTCGACGGA GTGCGCGATGTTGGCGGCGACCTC CAT GCGGATGCCGTCAGCGGTGCGCGC TTCCTGGGTCAGCCA TERM 5595 4260492 - 4260504 + g 73 -6.3 -4.42788 | opp_overlap 4260492 CTTTTTAACAGCAGA CCTTT GAG AAAGG TTTTATCCAGTTCGA TERM 5596 4261204 - 4261215 + g 74 -7.2 -4.1196 | opp_overlap 4261204, overlap 4261187 4261194 4261190 TGTCGGTGCCAATCA GCGC CAGC GCGC TTTTGGCGCTGCCTT TERM 5597 4261530 - 4261540 + H 70 -2.4 -4.93898 | TTTCAGAAGTTATGA AGCG GAT CGCA TTTTTATACTGATAT frwC 4261669 - 4262748 + | putative fructose-like permease EIIC subunit 2 frwB 4262763 - 4263083 + | putative fructose-like phosphotransferase EIIB subunit 2 TERM 5598 4263106 - 4263139 + F 72 -10.3 -2.91593 | overlap 4263105 ATGCCCAATGGCGCA AGTTTATCGGGCCTG CTCG CAGGCCCGATAAGAG ATTTATGCCGCCATC TERM 5599 4263304 - 4263324 + F 73 -10.4 -3.00476 | gap 1 CGAACCGGTCATTTG CGCCG-CGC CAAA GCGACGGCG TATATCCTTGAACAT TERM 5600 4265925 - 4265901 - g 83 -12.2 -3.64703 | gap 1, opp_overlap 4265901 CTTGTGCTATTGAAA CGGCTGG-CGA TACG TCGGCCAGCCG TCTACTGCCGTTGGC TERM 5601 4265901 - 4265925 + G 72 -12.2 -2.80994 | gap 1, opp_overlap 4265901 CTTGTGCTATTGAAA CGGCTGG-CGA TACG TCGGCCAGCCG TCTACTGCCGTTGGC TERM 5602 4266055 - 4266078 + G 76 -10.4 -3.69434 | gap 1, overlap 4266059 ACGGTTACTGGTTAG CGAGGGAATCA CGG TGA-TCCCTCG TTTGCCGTTGATTCC TERM 5603 4266173 - 4266160 - g 81 -8.1 -4.27441 | ATCATTAGGAATAAA GCAGG TTCA CCTGC TACCGTTTCATCAGT pflC 4265444 - 4266322 + | pyruvate formate lyase II activase frwD 4266324 - 4266677 + | putative fructose-like phosphotransferase EIIB subunit 3 yijO 4267515 - 4266664 - | paral regulator TERM 5604 4267595 - 4267607 + r 77 -10.5 -3.30124 | opp_overlap 4267580, overlap 4267584 TTATTGCCGGATAGC GGCGC TTT GCGCC TTATCCGGACTACGG yijP 4269409 - 4267676 - | hypothetical protein TERM 5605 4269578 - 4269607 + r 100 -12.1 -4.68655 | opp_overlap 4269566 ACAGCAGTATTTCAT GCCGCCCCCAC ATAACTGC GTGAGGGCGGC TTTCTTTTGGCGTTA ppc 4272271 - 4269620 - | phosphoenolpyruvate carboxylase TERM 5606 4270993 - 4271013 + g 82 -11.1 -3.78775 | overlap 4270981 GGATCAGGAGGGCCT GCTTGTCGG CTT CCGACCAGC TTTCGTAGTCGCCAA TERM 5607 4271978 - 4271989 + g 74 -7.2 -4.08945 | overlap 4271979 4271980 4271983 CACTTCCGGGTTGCT GGCG GCTT CGCC TTTTGGCGAAATGCT TERM 5608 4272454 - 4272436 - R 71 -7.4 -3.85698 | opp_overlap 4272435 GCCGTCTTTTATAAA GCCACG TAAAACC CGTGGC GTCAATTACTGCGAA argE 4273791 - 4272640 - | acetylornithine deacetylase argC 4273880 - 4274884 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 5609 4275105 - 4275078 - g 75 -4 -4.85782 | gap 1, opp_overlap 4275098, overlap 4275080 CCCGTGAAAAAGAAA GA-CGGCCTGCGC GTG ACGCCTGCCGATC AGATTGGCATCATTA argB 4274895 - 4275668 + | acetylglutamate kinase TERM 5610 4276109 - 4276091 - g 87 -8.1 -4.57569 | TCAGTTGGGTAAAAA GCTGCAC ACCGG GCGCAGC CGTAACGATCAGGTG argH 4275786 - 4277162 + | argininosuccinate lyase TERM 5611 4277195 - 4277222 + F 91 -8.2 -5.00616 | opp_overlap 4277193 CTATCAGGTAATACT GCCCGGCCGAGC ATCA GCGACGCCGGGC TTTTTTACGCAAAAA TERM 5612 4277260 - 4277244 - f 100 -13.7 -6.60575 | ACGCAAAAAAAAAAA GCGGACC AGA GGTCCGC AAAAGTTCACGTTGG oxyR 4277449 - 4278366 + | DNA-binding transcriptional regulator OxyR udhA 4279749 - 4278349 - | soluble pyridine nucleotide transhydrogenase TERM 5613 4279409 - 4279397 - G 71 -4.7 -4.63218 | opp_overlap 4279403, overlap 4279398 TGTTCGTCAATAAAA TGGGC GTT GCCCT GCAATATTTCACAGT yijC 4279948 - 4280583 + | DNA-binding transcriptional repressor FabR yijD 4280599 - 4280958 + | hypothetical protein TERM 5614 4280963 - 4281002 + T 76 -7.8 -4.2803 | gap 1, opp_overlap 4280985, overlap 4280964 4280967 CCGCGGAATAGTGTG CGAATGCCGGATGG-CGGT ATA ACCGGCCATCCGACGTACA TTTTACCTTGCGGTG TERM 5615 4280964 - 4281001 + T 77 -11.3 -3.16336 | gap 1, opp_overlap 4280985, overlap 4280963 4280967 CGCGGAATAGTGTGC GAATGCCGGATGG-CGGT ATA ACCGGCCATCCGACGTAC ATTTTACCTTGCGGT TERM 5616 4280967 - 4280998 + T 77 -11.6 -2.77861 | gap 1, opp_overlap 4280985, overlap 4280964 4280963 GGAATAGTGTGCGAA TGCCGGATGG-CGGT ATA ACCGGCCATCCGACG TACATTTTACCTTGC trmA 4282105 - 4281005 - | tRNA (uracil-5-)-methyltransferase TERM 5617 4281169 - 4281222 + g 74 -10.3 -3.58343 | GTGGATAAGCCTGCA CCATTTTTTCCGTTTCGCTGTCCAG ACCG CTGCGCGGCGGATCGACAAAAATGG TTTCGCACTGATAGC TERM 5618 4281452 - 4281438 - G 85 -4.2 -5.27938 | AGCGCTAAAGAAAAA TTGCCG TTG CCGCAA TACAACTCAAGCAGA TERM 5619 4282590 - 4282602 + GH 74 -10.5 -3.29461 | AACCGTTTTCAGCAG CCGCG CAG CGCGG TTCTGGCGCCCGTTA btuB 4282437 - 4284323 + | vitamin B12/cobalamin outer membrane transporter TERM 5620 4284332 - 4284365 + GF 71 -10.3 -2.64354 | gap 1, overlap 4284331 CTTCTGAACCACGTC CCACCG-TGCTGGTAT TTG ATTCCGGCGTCGGTGG ATTGTCGGTCTATGA TERM 5621 4284379 - 4284411 + GF 73 -10.5 -3.09349 | opp_overlap 4284386 GGATTGTCGGTCTAT GATGAGATTCGGCGG CTC CTGCCGGATCTCCAC TATATATATGCTTTC murI 4284268 - 4285119 + | glutamate racemase TERM 5622 4287235 - 4287270 + F 77 -9.2 -4.00532 | opp_overlap 4287246 AGGCGTTGCCATCAG TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA TTTGCTCTTTAAAAA TERM 5623 4287334 - 4287310 - f 71 -8 -3.93061 | gap 1, opp_overlap 4287310 4287317, overlap 4287314 4287320 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5624 4287886 - 4287874 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5625 4290510 - 4290559 + F 100 -22.5 -2.62616 | opp_overlap 4290514 4290519, overlap 4290514 4290519 4290524 GGAACTGCCAGGCAT CAAATAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTATCTG TAGTCTGCCGGATGG TERM 5626 4290555 - 4290514 - f 100 -17.5 -3.76224 | opp_overlap 4290510 4290514 4290519 4290524, overlap 4290519 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTAGTCTGCCGG TERM 5627 4290514 - 4290555 + F 100 -21.9 -2.97747 | opp_overlap 4290514 4290519, overlap 4290510 4290519 4290524 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTAGTCTGCCGG TERM 5628 4290550 - 4290519 - f 100 -13 -4.9448 | opp_overlap 4290514 4290510 4290519 4290524, overlap 4290514 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTAGTCT TERM 5629 4290519 - 4290550 + F 100 -17.4 -4.63586 | opp_overlap 4290519 4290514, overlap 4290514 4290510 4290524 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTAGTCT TERM 5630 4290524 - 4290545 + F 100 -15.9 -5.24647 | opp_overlap 4290519 4290514, overlap 4290519 4290514 4290510 TCAAATAAAACGAAG GGCCCTGTC GGAA GACAGGGCC TTTTGTTTTATCTGT murB 4290689 - 4291717 + | UDP-N-acetylenolpyruvoylglucosamine reductase birA 4291714 - 4292676 + | biotin--protein ligase TERM 5631 4292674 - 4292710 + T 84 -10.4 -3.91984 | gap 1, opp_overlap 4292676 4292684, overlap 4292684 CTGCGAAGCGCCGAA TAGTAAAAAAGGGGAGT CGGT GCTCCCCTTTTTT-CTG TTATTTCCGCAATCT TERM 5632 4292708 - 4292676 - T 70 -10.1 -3.04322 | gap 1, opp_overlap 4292674 4292684, overlap 4292684 GCGAAGCGCCGAATA GTAAAAAAGGGGAG TCGGTG CTCCCCTTTTTT-C TGTTATTTCCGCAAT TERM 5633 4292701 - 4292684 - T 100 -8.4 -5.27779 | opp_overlap 4292674 4292684, overlap 4292676 CCGAATAGTAAAAAA GGGGAG TCGGTG CTCCCC TTTTTTCTGTTATTT TERM 5634 4292684 - 4292701 + T 100 -9.1 -5.57729 | opp_overlap 4292684 4292676, overlap 4292674 CCGAATAGTAAAAAA GGGGAGT CGGT GCTCCCC TTTTTTCTGTTATTT coaA 4293667 - 4292711 - | pantothenate kinase TERM 5635 4292841 - 4292854 + g 70 -6.7 -4.10744 | opp_overlap 4292838 4292834, overlap 4292831 TTCCAAAGCGAAGTC GCTGT ATTA ACAGC TTCTTCTTTAGATAA TERM 5636 4293217 - 4293227 + g 78 -2.4 -5.1963 | GCATATCATACGATT CGGG GAA CCCC TTTTTCTTCATTAAC gns 4294043 - 4293870 - | putative cytoplasmic protein TERM 5637 4294303 - 4294291 - g 74 -7.7 -4.15222 | opp_overlap 4294287 ACCGGCTCGAATAAA GAGAG TTT CTCTC GATATTCAGTGCAGA SC4029 4294246 - 4294362 + | hypothetical protein tuf 4294620 - 4295804 + | elongation factor Tu TERM 5638 4295839 - 4295856 + F 95 -11.3 -4.60924 | opp_overlap 4295839 CAATGCGCAATAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5639 4295856 - 4295839 - f 95 -11.3 -4.65747 | opp_overlap 4295839 CAATGCGCAATAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5640 4296326 - 4296340 + G 77 -11.4 -3.52896 | CCACGCTGATCGTCG CTGCGG TTA CCGCAG TTATGTCACTGATCC secE 4296034 - 4296417 + | preprotein translocase subunit SecE nusG 4296419 - 4296964 + | transcription antitermination protein NusG TERM 5641 4296999 - 4296981 - f 91 -7.4 -5.14563 | opp_overlap 4296985 GCTGCGATCAAAAAA GCAGCGAT CTA ATCGTTGC ATAGGGCGCGAAATT TERM 5642 4297004 - 4297032 + F 100 -17.6 -5.35224 | CTAATCGTTGCATAG GGCGCGAAATTG ACATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 5643 4297446 - 4297423 - g 81 -8.2 -4.26681 | gap 1 ACAAAGTAGGTAAAA TTTCCCGC-GC TCA GCTGCAGGAAA TCGCGCAGACCAAAG rplK 4297122 - 4297550 + | 50S ribosomal protein L11 TERM 5644 4298097 - 4298057 - g 74 -3.1 -4.98255 | opp_overlap 4298065 CCGTAACGACAAAAA CGGCATCATCCACACCACC ATC GGTAAAGTGGACTTTGACG CTGACAAACTGAAAG rplA 4297554 - 4298258 + | 50S ribosomal protein L1 rplJ 4298678 - 4299175 + | 50S ribosomal protein L10 TERM 5645 4299168 - 4299181 + F 74 -8.1 -3.89695 | opp_overlap 4299168 4299167 GCGATGCAAAAGAAG CTGCG TAAT CGCAG TTGTCTTTATCAAGC rplL 4299242 - 4299607 + | 50S ribosomal protein L7/L12 TERM 5646 4299647 - 4299672 + F 100 -17.7 -4.64766 | opp_overlap 4299640 4299638 4299637, overlap 4299618 AGAAATCAGGCTGAT GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGCTGTAAG TERM 5647 4302967 - 4302951 - g 76 -2.9 -5.10033 | overlap 4302952 CGAAGAGAAACAAAA TCAGCTG GAG CAACTGG CTGAGCAGTATGACG TERM 5648 4303560 - 4303525 - g 74 -10.4 -3.55815 | gap 1, opp_overlap 4303527, overlap 4303556 AAAGAGCTGCTGAAA CTGGGCGACCTG-CCGA CCT CCGGTCAGATCACCCTG TTCGATGGCCGTACG rpoB 4299811 - 4303953 + | DNA-directed RNA polymerase subunit beta TERM 5649 4303972 - 4304001 + F 90 -13.6 -3.4252 | opp_overlap 4303968 4303966, overlap 4303973 TCGCTCAAACAGGTC ACTGGTGTCGGG GTAAAA CCCGACACCAGA TTGTGCTAACTCCGA TERM 5650 4303973 - 4304000 + F 100 -17.1 -2.65298 | opp_overlap 4303968 4303966, overlap 4303972 CGCTCAAACAGGTCA CTGGTGTCGGG GTAAAA CCCGACACCAG ATTGTGCTAACTCCG TERM 5651 4305760 - 4305740 - g 77 -11.1 -3.5882 | opp_overlap 4305739 4305740 CACACCAGCCTGAAA GACACGACC GTT GGTCGCGCC ATTCTGTGGATGATC TERM 5652 4305995 - 4305980 - g 78 -2.6 -5.24531 | gap 1, overlap 4305983 ATCCCGGAGAAAAAA CACGAGA TCA TCTC-TG AGGCGGAAGCCGAAG rpoC 4304030 - 4308253 + | DNA-directed RNA polymerase subunit beta' TERM 5653 4308261 - 4308290 + F 80 -12.9 -2.53164 | opp_overlap 4308262, overlap 4308260 ACGAGTAATCGTTAA ATGGTGGAGGGGT ATTT ATCCCTCCACCAG CTTCATGCTGGATAC TERM 5654 4308289 - 4308262 - f 93 -14.2 -3.61764 | opp_overlap 4308261 4308260 CGAGTAATCGTTAAA TGGTGGAGGGGT ATTT ATCCCTCCACCA GCTTCATGCTGGATA SC4039 4308295 - 4308621 + | putative inner membrane protein SC4040 4309366 - 4310376 + | putative cytoplasmic protein TERM 5655 4310544 - 4310521 - T 100 -8.8 -5.72616 | opp_overlap 4310521 ACGGACATAAAAAAA CGGGAGGTCG ATAA CAATCTCCCG TTTTTCGCATTACGT TERM 5656 4310521 - 4310544 + T 89 -8.8 -4.67234 | opp_overlap 4310521 ACGGACATAAAAAAA CGGGAGGTCG ATAA CAATCTCCCG TTTTTCGCATTACGT thiH 4311730 - 4310597 - | thiamine biosynthesis protein ThiH TERM 5657 4310743 - 4310760 + g 89 -9.1 -4.56597 | CCGGATGATCGTCAG CGTAGCC GCCG GGCTGCG TTTTTGAGAAGGCGC TERM 5658 4311409 - 4311437 + g 78 -11.7 -3.21099 | overlap 4311423 CGCGGGCAATTTCAG CCTCATCCAGCGT CTT ACGCTTGATGCGG TTGCTCATCGAGAAG thiG 4312497 - 4311727 - | thiazole synthase thiF 4313438 - 4312680 - | thiamine biosynthesis protein ThiF thiE 4314066 - 4313431 - | thiamine-phosphate pyrophosphorylase TERM 5659 4313763 - 4313792 + g 74 -10.8 -3.61328 | gap 1 CGCCCAGGCGTAAGC CCGCCG-CCTGAA TCGCT TTCAGGTCGGTGG TTTCAAGGTCTTCCT thiC 4315961 - 4314066 - | thiamine biosynthesis protein ThiC rsd 4316813 - 4316325 - | anti-RNA polymerase sigma 70 factor nudC 4316906 - 4317679 + | NADH pyrophosphatase hemE 4317720 - 4318784 + | uroporphyrinogen decarboxylase TERM 5660 4319203 - 4319193 - g 74 -2.4 -5.08824 | opp_overlap 4319193 GGCGTAGCGAAAAAA CGGC TAT GCGG TAAATTTGAGCCACT nfi 4318794 - 4319465 + | endonuclease V yjaG 4319507 - 4320097 + | hypothetical protein TERM 5661 4320499 - 4320517 + G 89 -8.8 -4.59342 | opp_overlap 4320496 AGAAATCAAAATCGC CGCCGCTA ACG TACCGGCG TTTGTTTCTGGTAAA hupA 4320284 - 4320556 + | transcriptional regulator HU subunit alpha TERM 5662 4320586 - 4320601 + G 95 -10.4 -4.64844 | opp_overlap 4320586 AACAGTTTTATCGAA GGGGCT CATC AGCCCC TTTTGTCTGTCTGGC yjaH 4320568 - 4321260 + | hypothetical protein TERM 5663 4321291 - 4321268 - Tf 100 -16.8 -3.08679 | opp_overlap 4321262, overlap 4321273 CCTTTTGATGGAATA CCGAATGGCG AAGC CGCCATTCGG CAAACATGCTTTACC zraP 4321757 - 4321302 - | zinc resistance protein TERM 5664 4321861 - 4321910 + GH 71 -10.8 -2.62184 | opp_overlap 4321872, overlap 4321881 TTCAGGCGGCAAAAA GCGAGTAAAAATGACTCGCATG ACCCGC CTGGCGAGTCATTTTTACCCAC TAGTATCCGAAAGGG TERM 5665 4321899 - 4321872 - gH 80 -6.2 -4.79667 | opp_overlap 4321861 4321881 AAAAGCGAGTAAAAA TGACTCGCATGA CCCG CCTGGCGAGTCA TTTTTACCCACTAGT TERM 5666 4321881 - 4321899 + GH 89 -8.8 -4.58663 | opp_overlap 4321872, overlap 4321861 TAAAAATGACTCGCA TGACCCGC CTG GCGAGTCA TTTTTACCCACTAGT TERM 5667 4322636 - 4322670 + GH 89 -3.4 -5.44119 | overlap 4322645 TGATTGTTTTGTCTG CGTTAGCGGCGGTGCT GTT GGCAACGTTACTGGCG TTTTTTTGGCATCAG TERM 5668 4323218 - 4323241 + GH 78 -6.7 -4.64144 | gap 1, opp_overlap 4323214 4323218, overlap 4323237 ATAGCGGGAAAGGGA TCGCC-CCGG ATCAG CTGGAGGCGA TTTTTACGCCTTATT hydH 4321744 - 4323408 + | sensor protein ZraS TERM 5669 4324690 - 4324663 - g 100 -9.7 -5.00616 | opp_overlap 4324663 CGGCGCTGGAAAAAA CGGGCGGCAAC AAAACG GAAGCCGCCCG TCAGTTAGGCATTAC hydG 4323414 - 4324739 + | transcriptional regulatory protein ZraR purD 4326026 - 4324776 - | phosphoribosylamine--glycine ligase TERM 5670 4327704 - 4327663 - H 85 -13.9 -2.96216 | opp_overlap 4327662 4327663, overlap 4327665 4327700 TTTGACGATTACAGA GAGCGTTAGCTGATTCCTT CGTG AAAAACTCAGCTAACGCCC CTTATGGGGCATCCT TERM 5671 4327702 - 4327665 - H 82 -12.9 -3.03443 | opp_overlap 4327663 4327662, overlap 4327663 4327700 TGACGATTACAGAGA GCGTTAGCTGATTCCTT CGTG AAAAACTCAGCTAACGC CCCTTATGGGGCATC TERM 5672 4327749 - 4327767 + H 83 -2.4 -5.63236 | opp_overlap 4327747, overlap 4327753 ATTGTAACGAAAACG TTTGCG CAACGCT CGCGAA TTTTTCTTTTTAAAT TERM 5673 4328043 - 4328029 - H 76 -4.2 -5.0916 | opp_overlap 4328029, overlap 4328030 4328037 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 5674 4328075 - 4328063 - H 71 -7.7 -4.00532 | overlap 4328073 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACGGTG TERM 5675 4329992 - 4330027 + H 77 -9.2 -4.00532 | opp_overlap 4330003 AGGCGTTGCCATCAG TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA TTTGCTCTTTAAAAA TERM 5676 4330091 - 4330067 - H 71 -8 -3.93061 | gap 1, opp_overlap 4330067 4330074, overlap 4330071 4330077 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5677 4330643 - 4330631 - H 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5678 4333266 - 4333315 + H 100 -22.5 -2.7035 | opp_overlap 4333270 4333275, overlap 4333270 4333275 4333280 GGAACTGCCAGGCAT CAAATAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTATCTG TAGTCTGTCGGTGAG TERM 5679 4333311 - 4333270 - H 100 -17.5 -3.76224 | opp_overlap 4333270 4333266 4333275 4333280, overlap 4333275 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTAGTCTGTCGG TERM 5680 4333270 - 4333311 + H 100 -21.9 -2.99545 | opp_overlap 4333270 4333275, overlap 4333266 4333275 4333280 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTAGTCTGTCGG TERM 5681 4333306 - 4333275 - H 100 -13 -4.9448 | opp_overlap 4333270 4333266 4333275 4333280, overlap 4333270 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTAGTCT TERM 5682 4333275 - 4333306 + H 100 -17.4 -4.63586 | opp_overlap 4333275 4333270, overlap 4333270 4333266 4333280 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTAGTCT TERM 5683 4333280 - 4333301 + H 100 -15.9 -5.24647 | opp_overlap 4333275 4333270, overlap 4333275 4333270 4333266 TCAAATAAAACGAAG GGCCCTGTC GGAA GACAGGGCC TTTTGTTTTATCTGT TERM 5684 4333366 - 4333352 - H 71 -7.8 -3.99324 | opp_overlap 4333352 CCTGAGGAGGACAAA TCCGCC GGG AGCGGA TTTGAACGTTGCGCA TERM 5685 4333468 - 4333449 - g 89 -13.6 -3.69283 | opp_overlap 4333449 CAATTTAGTGAAGAA GCCCATCC GTCA GGATGGGC TTTTTTGCGTGTGCG TERM 5686 4333449 - 4333468 + G 100 -13.6 -5.1287 | opp_overlap 4333449 CAATTTAGTGAAGAA GCCCATCC GTCA GGATGGGC TTTTTTGCGTGTGCG SC4059 4333375 - 4333605 + | hypothetical protein yjaB 4334033 - 4333596 - | hypothetical protein metA 4334190 - 4335119 + | homoserine O-succinyltransferase TERM 5687 4335180 - 4335165 - f 71 -10.4 -2.72661 | opp_overlap 4335165 CAGCATGTTGAATCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA TERM 5688 4335165 - 4335180 + F 100 -10.4 -5.63517 | opp_overlap 4335165 CAGCATGTTGAATCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA aceB 4335388 - 4336989 + | malate synthase TERM 5689 4337225 - 4337210 - g 90 -5.4 -5.15969 | GGTGAAGCGAAAAAA GGCTAT ATCA ACAGCC TTGGCGCGCTGACCG aceA 4337021 - 4338325 + | isocitrate lyase TERM 5690 4338762 - 4338789 + G 90 -8.4 -4.72188 | overlap 4338765 TTGCCGGTTATTTGA CCACCGCTCG TTAACACC CGAGCGGTTG TTTATTTTCAGTTCG TERM 5691 4338765 - 4338786 + G 85 -8.7 -4.44301 | overlap 4338762 CCGGTTATTTGACCA CCGCTCG TTAACACC CGAGCGG TTGTTTATTTTCAGT TERM 5692 4339077 - 4339089 + G 82 -5.5 -5.08088 | opp_overlap 4339070 4339068 ATTAACCACACCTGA CGGTA CGC TGCCG TTTTTATTGCCGATT aceK 4338427 - 4340178 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein SC4065 4340576 - 4340142 - | putative cytoplasmic protein TERM 5693 4340235 - 4340223 - G 80 -4.7 -5.00616 | CTCGCGCTCAAAAAA GGCCC GGT GTGCC GCTTGCCAGTACGCC TERM 5694 4340361 - 4340308 - G 83 -9.6 -4.08767 | gap 3, opp_overlap 4340360 CTCATCTCGTTAAAA CGGATCAGCCTGAGCGCCAGCGTGCGT ATG ACGCACAC-GGCG-TC-GCCTGTGCCG TTGAGCACAATGTGA iclR 4341384 - 4340560 - | transcriptional repressor IclR TERM 5695 4340914 - 4340893 - G 80 -5.1 -4.83615 | gap 1, overlap 4340895 GAGCTGTGATAAAAA CGCCT-TGCC CGC GCCAGAGGCG TGCATGGGCAGCTTG TERM 5696 4342084 - 4342069 - g 74 -7.5 -4.16842 | opp_overlap 4342068 CGTACGCCGAACAAA CCGCG CTACGT CGCGG GTGTGCTCGGCCCAA TERM 5697 4342847 - 4342831 - g 75 -6.5 -4.41237 | overlap 4342833 ATCAAAGAAGAGAAA TACAGCG AAG CGCTGGA TGTCGCTCGTCAGCA TERM 5698 4342845 - 4342833 - g 73 -9.1 -3.79177 | overlap 4342831 CAAAGAAGAGAAATA CAGCG AAG CGCTG GATGTCGCTCGTCAG TERM 5699 4342899 - 4342948 + G 72 -12.1 -2.72344 | gap 1, opp_overlap 4342899, overlap 4342910 4342911 TATTGATATCAATAT GGATGAGGGGATGCTCGA-CGCCG AAG CGGCGATGGTGCGTTTCCTCAGCC TGATTGCCGGTGAGC TERM 5700 4344425 - 4344388 - g 82 -5.4 -5.0133 | gap 1, overlap 4344389 CACGCCCGCAAAAAA CCGCGCA-CGCCGCCGG TCACG CTGGAAGCGGCGCGCGA TAACGATCTGGCGTT metH 4341694 - 4345377 + | B12-dependent methionine synthase TERM 5701 4345406 - 4345436 + F 83 -9 -4.20918 | opp_overlap 4345408 4345410 4345413, overlap 4345408 4345410 4345413 CACTTTTCCTTACAA CATACAAGGCACTC ATT GGGTGCCTTGTCTC TTTCTTACAATTAAC TERM 5702 4345408 - 4345434 + F 93 -11.6 -3.70139 | opp_overlap 4345408 4345410 4345413, overlap 4345406 4345410 4345413 CTTTTCCTTACAACA TACAAGGCACTC ATT GGGTGCCTTGTC TCTTTCTTACAATTA TERM 5703 4345410 - 4345432 + F 90 -14.2 -3.4214 | opp_overlap 4345408 4345410 4345413, overlap 4345408 4345406 4345413 TTTCCTTACAACATA CAAGGCACTC ATT GGGTGCCTTG TCTCTTTCTTACAAT TERM 5704 4345432 - 4345410 - f 79 -12 -3.17146 | opp_overlap 4345410 4345408 4345406 4345413, overlap 4345408 4345413 TTTCCTTACAACATA CAAGGCACTC ATT GGGTGCCTTG TCTCTTTCTTACAAT TERM 5705 4345413 - 4345429 + F 79 -10.1 -3.83559 | opp_overlap 4345410 4345408 4345413, overlap 4345410 4345408 4345406 CCTTACAACATACAA GGCACTC ATT GGGTGCC TTGTCTCTTTCTTAC TnpR 4345931 - 4347139 + | transposase of Tn10 TERM 5706 4347676 - 4347707 + T 70 -9.3 -3.42069 | opp_overlap 4347666 4347667 4347664, overlap 4347674 4347677 TAACAGCGCCGCCAA TGCTGCCGCGCGT CGCGTA GCGCTCGGCAGCC TATTGTTCAAATTGA TERM 5707 4347677 - 4347706 + T 78 -12.8 -2.64759 | opp_overlap 4347666 4347667 4347664, overlap 4347676 4347674 AACAGCGCCGCCAAT GCTGCCGCGCGT CGCGTA GCGCTCGGCAGC CTATTGTTCAAATTG TERM 5708 4347850 - 4347876 + T 76 -5 -4.83169 | overlap 4347843 4347851 GCGCTGCCTGGCGAT GGTGCCATTTGC CGA GCTGATGGCGCG TTTTTGTAAACGAAT TERM 5709 4348670 - 4348619 - T 100 -13.9 -3.79043 | gap 1, opp_overlap 4348619 GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTAC GGAGAACATGCGT GTAGG-CCCGCCATTCGGCA TTCAATGTGGCCAGG TERM 5710 4348619 - 4348670 + T 100 -16.8 -3.12351 | gap 1, opp_overlap 4348619 GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTACG GAGAACATGCG TGTAGGC-CCGCCATTCGGCA TTCAATGTGGCCAGG pepE 4349377 - 4348688 - | peptidase E TERM 5711 4348739 - 4348778 + g 71 -10.6 -3.16881 | opp_overlap 4348739 4348742 TTCGCCCGCTTTAAA CACCCAGGTGGTATTCGG GCCG CCGAGAACCGCCTGGCCG TTGCTCACCTGAATC SC4070 4349449 - 4349550 + | putative cytoplasmic protein TERM 5712 4349658 - 4349646 - g 89 -3.3 -5.55664 | TGACCAGCAAAAAAA TGGCC AAA GTCCA ACGCACGGCTAAAAA TERM 5713 4349694 - 4349675 - g 77 -3.5 -5.03314 | CGCACGGCTAAAAAA TCACGCG TTCAGG CTCGTGA GGCCAGAGAAGCGGT yaiL 4349585 - 4350124 + | hypothetical protein yjbC 4350171 - 4351040 + | 23S rRNA pseudouridine synthase F TERM 5714 4351045 - 4351032 - T 83 -2.3 -5.68438 | overlap 4351033 GGACGAAAGAAAAAA GGACG TTAA CGTCT GCCGCGCGTCGGCGT yjbD 4351336 - 4351037 - | hypothetical protein ybaS 4352348 - 4351407 - | putative Na+-dependent transporter TERM 5715 4351525 - 4351506 - G 70 -10 -3.39327 | gap 1 GTGCCACACTGAGAA CAGCGC-GC CAG GCAGCGCTG CGAGCGGGCCAAAGT SC4075 4352466 - 4352621 + | hypothetical protein SC4076 4353338 - 4352610 - | putative cytoplasmic protein TERM 5716 4352932 - 4352943 + g 74 -4.4 -4.77157 | CTTATGGCATTGATT TCCT TTTC AGGA TTTTTCATAAATTCA TERM 5717 4353041 - 4353052 + g 74 -3 -4.8487 | opp_overlap 4353041 CATGCTGAGAAAAGT CATT AAGT AATG TTATTTTTTTCATAG TERM 5718 4353438 - 4353468 + r 95 -11.5 -4.61852 | opp_overlap 4353436 4353445 TATGGTTATTGAAGT TTAATTACATTCA AGATG TGAATGTAATTAA TTTGTTTATAATGTT SC4077 4353885 - 4353535 - | putative inner membrane protein TERM 5719 4353795 - 4353778 - G 79 -2.7 -5.24796 | opp_overlap 4353779, overlap 4353779 TCGATATAATAAAAA TTCATTC CTGC GAATGAT CTCATGCCGCCAGTA SC4078 4354531 - 4354076 - | putative cytoplasmic protein SC4079 4355142 - 4354528 - | putative cytoplasmic protein vph 4356807 - 4355149 - | putative phage tail fiber protein H TERM 5720 4356452 - 4356474 + g 83 -10.4 -3.92522 | opp_overlap 4356432 4356430 4356444 ATACAGACCTGCTTG CCGCAGCCGC CCG GCAGCAGCGG TTTGTAGGATTCCGG vpi 4357442 - 4356810 - | putative phage tail protein vbp 4358550 - 4357435 - | putative phage baseplate protein vbp 4358900 - 4358541 - | putative phage baseplate protein TERM 5721 4359667 - 4359649 - R 79 -4.6 -5.10154 | overlap 4359651 4359655 4359659 AGCTAAAAGGAAAAA CATAAACG TAC CGTTCATA ACCCGATCGGGGTAG TERM 5722 4360565 - 4360551 - R 81 -3.5 -5.30348 | ATTCAATAAGAAAAA TGGCC AAAAA AGCCA GTAGTATCATCGCCG gtrB 4361540 - 4360611 - | putative phage glycosyltransferase gtrA 4361911 - 4361537 - | putative phage glucose translocase TERM 5723 4361602 - 4361579 - G 95 -8.2 -5.0916 | TCTGGAATATAAAAA TCCGCAAATA AGGC TAATTGCGGA AAATACAATGAGCGT TERM 5724 4361772 - 4361760 - G 74 -3.3 -4.86862 | GCGAAAAAACTAAAA CTGAC AGC GACAG CAAAGCCCGCTACGT SC4086 4362948 - 4362226 - | putative phage baseplate component SC4087 4364001 - 4362958 - | putative cytoplasmic protein SC4088 4364198 - 4363989 - | putative inner membrane protein mac 4365151 - 4364198 - | putative methyl-accepting chemotaxis protein TERM 5725 4365354 - 4365395 + r 71 -10.1 -3.14602 | gap 1, opp_overlap 4365336, overlap 4365352 4365375 TCCCGCCGGATTTGC CGGGAAGCGCGGCTGGCGTC GGC GGCGT-GGCGGCGCTTTTCG TCTTCATAGGCTGCG TERM 5726 4365375 - 4365389 + r 77 -7 -4.44797 | overlap 4365354 4365352 GCGCGGCTGGCGTCG GCGGCG TGG CGGCGC TTTTCGTCTTCATAG TERM 5727 4365457 - 4365475 + r 73 -10.2 -3.02043 | overlap 4365464 CGCTTTCGCTCCCGA TGCCAGCG GCG CGCTGGCC TGTTGCGCGACCATT TERM 5728 4365551 - 4365579 + r 76 -5.2 -4.74285 | gap 1, overlap 4365544 GTGCTGATGCCCTGC GCGCTTTTCGCCC AATC GGG-GATCAGCGC TTTTATCTTCTCAAT TERM 5729 4365782 - 4365794 + r 74 -6.9 -4.26903 | ACGCCTGCAATGCCT CCGTC AAA GGCGG TTTTGATGCGCTCCC TERM 5730 4366692 - 4366714 + r 70 -9.1 -3.34398 | overlap 4366690 4366709 GAAGATCCACGCCCT GGCGGGCAG ACCAA CTGTCCGTC TCTTTCGAGAAGGCG TERM 5731 4366762 - 4366780 + r 93 -10.2 -4.7254 | opp_overlap 4366752 GAAATTCGCTGCCGC CGCGCCTG CGT CAGGGGCG TTTTTCATGGCGACT TERM 5732 4366985 - 4367028 + r 75 -9.5 -3.59262 | gap 2, overlap 4366962 4366987 CGAGTGGCCAGAGCC GCCTGCGCCCAGCTTTGCGCG CTGT CGCGGGAGGC-GGTCGC-GGC TTTGGCGATATCGGG TERM 5733 4367058 - 4367115 + r 100 -12.1 -4.7871 | gap 1, opp_overlap 4367060, overlap 4367062 GCATGTAGCGGCTAA GATCCTGCAATGCGCTGACGCCGC CTTCGATCATC GTGGCGGCGGCGCTTTGCAG-ATC TTTTTGATCCTGGTT TERM 5734 4367062 - 4367112 + r 85 -14 -2.99543 | opp_overlap 4367060, overlap 4367058 GTAGCGGCTAAGATC CTGCAATGCGCTGACGCCGC CTTCGATCATC GTGGCGGCGGCGCTTTGCAG ATCTTTTTGATCCTG TERM 5735 4367614 - 4367592 - R 93 -12.7 -3.72576 | opp_overlap 4367589 4367592 4367609 4367611 GCTTGGGTCAGGAAA CCCGCAGGC ATTAA GCCTGCGAG TCGTATTCGTGTTTA TERM 5736 4367592 - 4367614 + r 72 -10.5 -2.8185 | opp_overlap 4367592, overlap 4367589 4367609 4367611 GCTTGGGTCAGGAAA CCCGCAGGC ATTAA GCCTGCGAG TCGTATTCGTGTTTA SC4090 4368007 - 4367690 - | hypothetical protein TERM 5737 4368054 - 4368035 - R 93 -13.6 -3.53091 | opp_overlap 4368034 ATTCGTCGTGTTAAA TTCGGGGC CGTA GCCCCGAA GTAATTAACCGCCAA vtc 4368583 - 4368059 - | putative phage tail core protein vts 4370010 - 4368583 - | putative phage tail sheath protein SC4093 4370197 - 4370000 - | putative cytoplasmic protein SC4094 4370649 - 4370194 - | putative cytoplasmic protein TERM 5738 4370810 - 4370772 - R 93 -12.7 -3.74303 | gap 1, opp_overlap 4370779, overlap 4370779 AAAAGTTAAAACGAA TAAA-AAATCCCCGGCGT ATAA ACGGCGGGGATTTGTTTA ATGGTTACCTCGTTG TERM 5739 4370779 - 4370802 + r 100 -12.4 -4.53349 | opp_overlap 4370772 4370779 AAAACGAATAAAAAA TCCCCGGCGT ATAA ACGGCGGGGA TTTGTTTAATGGTTA TERM 5740 4370802 - 4370779 - R 100 -12.4 -5.61689 | opp_overlap 4370779, overlap 4370772 AAAACGAATAAAAAA TCCCCGGCGT ATAA ACGGCGGGGA TTTGTTTAATGGTTA SC4095 4371122 - 4370808 - | putative inner membrane protein lmt 4371740 - 4371135 - | putative soluble lytic murein transglycosylase TERM 5741 4371295 - 4371306 + g 74 -2.2 -5.09685 | gap 1, opp_overlap 4371288 GCATCCAACCCCTTT GC-GG CGG CCAGC TTTTTATCTCTGTTC TERM 5742 4371620 - 4371602 - G 70 -9.5 -3.37533 | opp_overlap 4371602 4371601, overlap 4371603 CGGCAAAATTAGCAA CGGGGGC GTTAA GCCCCCA GATTTCGCGCGCGGT SC4097 4372030 - 4371743 - | putative inner membrane protein TERM 5743 4371813 - 4371772 - G 70 -8.7 -3.76125 | gap 1, opp_overlap 4371806, overlap 4371773 4371784 4371802 CGACGGCAAGGCAAA TTGCCGCAACGATGA-TCGC GCG ACGAATCATCGCCGCGGCGC AGCACAGCGATTCTT TERM 5744 4371812 - 4371773 - G 72 -12.2 -2.85354 | gap 1, opp_overlap 4371806, overlap 4371772 4371784 4371802 GACGGCAAGGCAAAT TGCCGCAACGATGA-TCGC GCG ACGAATCATCGCCGCGGCG CAGCACAGCGATTCT SC4098 4372626 - 4372952 + | putative cytoplasmic protein SC4099 4374433 - 4373084 - | aspartate kinase III pgi 4374778 - 4376427 + | glucose-6-phosphate isomerase TERM 5745 4376436 - 4376484 + F 72 -9 -3.53811 | overlap 4376435 CGCCTGATGGCACTG CG-CTTATCCGGTCTACGTAATGC ATA GCGTC-TGTAGGCCGGGTAAGGCG TTTCGCCGCCATCCG TERM 5746 4376545 - 4376526 - f 83 -4.2 -5.31072 | opp_overlap 4376527, overlap 4376527 ATAAGATAATAAAAA GGCCGATA TTCA CATCGGCT TTTTTTATAAGATAA TERM 5747 4376527 - 4376544 + F 91 -7 -5.626 | opp_overlap 4376526 4376527 TAAGATAATAAAAAG GCCGAT ATTCAC ATCGGC TTTTTTTATAAGATA yjbE 4376871 - 4377113 + | hypothetical protein TERM 5748 4377132 - 4377153 + F 95 -11.7 -4.13014 | opp_overlap 4377132 4377135, overlap 4377135 CGGTATGTTTAACCA TAACCACAC TCCG GTGTGGTTA TTTTGCCCCTCTGGA TERM 5749 4377153 - 4377132 - f 76 -11.7 -2.72344 | opp_overlap 4377132 4377135, overlap 4377135 CGGTATGTTTAACCA TAACCACAC TCCG GTGTGGTTA TTTTGCCCCTCTGGA TERM 5750 4377135 - 4377150 + F 79 -9 -4.18908 | opp_overlap 4377132 4377135, overlap 4377132 TATGTTTAACCATAA CCACAC TCCG GTGTGG TTATTTTGCCCCTCT TERM 5751 4377150 - 4377135 - f 72 -9 -3.51329 | opp_overlap 4377135 4377132, overlap 4377132 TATGTTTAACCATAA CCACAC TCCG GTGTGG TTATTTTGCCCCTCT yjbF 4377147 - 4377815 + | putative outer membrane lipoprotein yjbG 4377812 - 4378549 + | hypothetical protein yjbH 4378549 - 4380645 + | putative outer membrane lipoprotein TERM 5752 4380868 - 4380884 + G 72 -2.1 -4.87665 | GGGGCTGCTTACCCT CGGTCTG ATC CTGGTCG TTTTTCTCGGTAAAG yjbA 4380788 - 4381198 + | phosphate-starvation-inducible protein PsiE TERM 5753 4381283 - 4381268 - T 100 -10.4 -5.66684 | TAACGCATAAAAAAA GCGCTC CGAA GAGCGC CAAAATACGACCATA malG 4382254 - 4381364 - | maltose transporter permease malF 4383813 - 4382269 - | maltose transporter membrane protein TERM 5754 4382839 - 4382827 - G 71 -4.7 -4.55849 | CAAAATTGAAATAAA CGACG GTA CGGCG TAGGGCAGAATCAGC TERM 5755 4383870 - 4383912 + r 95 -12.9 -3.86346 | gap 1, opp_overlap 4383909 TGTGCCTGATGGCGT TGCGCTTATCAGGCCTACGG TGTG TTGTAGGCCGGATAAG-GCA TTTATGCCGCCATCC malE 4385135 - 4383945 - | maltose ABC transporter periplasmic protein TERM 5756 4385932 - 4385958 + G 74 -4.4 -4.7497 | gap 1, overlap 4385941 CGCGTAGCGATTGGC CGCACGCTGGT GGCGGA GCC-GCGTGTG TTTTTGCTGGATGAA malK 4385497 - 4386606 + | maltose/maltodextrin transporter ATP-binding protein lamB 4386695 - 4388053 + | maltoporin TERM 5757 4388961 - 4388923 - g 76 -12.2 -3.09803 | TAACGGTAGGCAATA CCGCCGCGCCGGTCGCTG CGC CAGCGCCAGTCGCGCCGA AGAAAAGCGAACCGA malM 4388217 - 4389134 + | maltose regulon periplasmic protein TERM 5758 4389168 - 4389187 + F 100 -11.4 -5.75599 | opp_overlap 4389166 GATTTTGCAGCAACT GGTGCGTC TCCT GGCGCACC TTTTTTTGTCATTTC TERM 5759 4389773 - 4389783 + G 89 -3.2 -5.47821 | CGGAAAACCGCTGTT GCTT ACC GAGC TTTTTTTACCTGCAT ubiC 4389315 - 4389812 + | chorismate pyruvate lyase ubiA 4389826 - 4390698 + | 4-hydroxybenzoate octaprenyltransferase plsB 4393217 - 4390797 - | glycerol-3-phosphate acyltransferase TERM 5760 4392086 - 4392073 - G 73 -5.3 -4.63218 | overlap 4392075 4392076 CCTCCTTCAACAAAA TACTC AACC GAGTA GCCGCGGCTGAACAG TERM 5761 4393633 - 4393619 - g 72 -11.4 -3.06679 | opp_overlap 4393615 4393614 AACAGCGCTATTGAA GCGGTC GTG GACCGC ATCGGTTCTGAATAC dgkA 4393388 - 4393756 + | diacylglycerol kinase TERM 5762 4393995 - 4393956 - g 95 -14.4 -3.53444 | gap 1, opp_overlap 4393944 CGACGCGTGCGGAAA TCGCGCAGCGTTTGGGG TTCCGTT CCCCAAACGCGGCG-GA AGAACACCTTAAAGC lexA 4393865 - 4394473 + | LexA repressor TERM 5763 4394788 - 4394819 + G 86 -7.2 -4.73614 | gap 1 GCCCGGTTTTCCTGG GCGGCGTGGCGGTGG GCG CGACTGCCAC-CAGC TTTCTTTTCATGCTG TERM 5764 4395331 - 4395351 + G 70 -6.7 -4.11692 | TGCTAAAACAGGCCT GGCGCGGCA ACG TGCGCCGCC TTTTGGCGCTCAATC dinF 4394652 - 4395977 + | DNA-damage-inducible SOS response protein SC4118 4395959 - 4396087 + | putative cytoplasmic protein yjbJ 4396106 - 4396318 + | putative stress-response protein zur 4396933 - 4396418 - | zinc uptake transcriptional repressor TERM 5765 4396870 - 4396888 + g 78 -6.6 -4.66833 | overlap 4396872 GAGGCGTCAGGCGCA CGTTGCGC TGC GCGCAGAG TTTTTCAGCTTGCGC TERM 5766 4397620 - 4397592 - g 74 -4.4 -4.74504 | gap 1, overlap 4397593 4397594 ATCTCAACGGAAAAA CCGCCCG-CGCCA ATGC CGGCGCCGGGTTG GCGGTAAGTATTCCA SC4121 4397180 - 4398490 + | hypothetical protein TERM 5767 4398501 - 4398521 + F 100 -18.3 -3.70068 | TCTGAGGTGCTTTCA CCGGAGGCG CTA CGCCTCCGG TTTAGCGTTATGCTA yjbN 4398578 - 4399576 + | tRNA-dihydrouridine synthase A TERM 5768 4399607 - 4399630 + F 76 -4.5 -5.07523 | TAGTCAATCTCACCA CGCTCTGTG CAGTCT TGCAGGGCG TTTTCTTTATATATC pspG 4399744 - 4399986 + | phage shock protein G TERM 5769 4400148 - 4400118 - T 89 -5.6 -5.80364 | gap 2, opp_overlap 4400118 4400120 4400121 4400122, overlap 4400122 AGCCGAACAAAAAAA GAAA--GGGCTTCC CGGGT GGAAGCCCAATTTC TTTGCAGAGCTATTA TERM 5770 4400120 - 4400144 + T 72 -5.6 -4.41616 | opp_overlap 4400118 4400122, overlap 4400118 4400121 4400122 CCGAACAAAAAAAGA AAGGGCTTCC CGGGT GGAAGCCCAA TTTCTTTGCAGAGCT TERM 5771 4400142 - 4400122 - T 100 -12.6 -5.33131 | opp_overlap 4400121 4400120 4400118 4400122, overlap 4400118 GAACAAAAAAAGAAA GGGCTTCC CGGGT GGAAGCCC AATTTCTTTGCAGAG TERM 5772 4400122 - 4400142 + T 78 -12.6 -2.54371 | opp_overlap 4400122 4400118, overlap 4400121 4400120 4400118 GAACAAAAAAAGAAA GGGCTTCC CGGGT GGAAGCCC AATTTCTTTGCAGAG qor 4401144 - 4400161 - | quinone oxidoreductase, NADPH-dependent TERM 5773 4400601 - 4400613 + g 75 -6.2 -4.58395 | opp_overlap 4400580, overlap 4400588 AGGCGCCGGCGTCCA GCGC CCGCT GCGC TTTTTGCGCGCTACC TERM 5774 4401295 - 4401284 - g 71 -5.8 -4.36914 | opp_overlap 4401284 GTTGCCGGGATAAAA GTGC CGCC GCAC TCGATTGAAGCGGAA TERM 5775 4401556 - 4401544 - g 78 -6.9 -4.57569 | overlap 4401546 GGAGCTGTCTAAAAA CACGC CAA GCGCG GCGAATATCAGTGCT dnaB 4401209 - 4402624 + | replicative DNA helicase alr 4402656 - 4403735 + | alanine racemase tyrB 4403921 - 4405114 + | aromatic amino acid aminotransferase TERM 5776 4405111 - 4405161 + F 71 -9.6 -3.29541 | opp_overlap 4405117 4405137, overlap 4405108 ATTTGCCGCTGTCAT GTAATATTCAGGCCGGACGGCGAT AAC AGTGCCTTCCGGCCTGACAATAGC TGTTGTGATCATCCT TERM 5777 4405155 - 4405117 - f 78 -11.7 -3.08679 | opp_overlap 4405111 4405108, overlap 4405137 CGCTGTCATGTAATA TTCAGGCCGGACGGC GATAACAGT GCCTTCCGGCCTGAC AATAGCTGTTGTGAT TERM 5778 4405479 - 4405501 + G 83 -10.4 -3.92324 | opp_overlap 4405470 4405468 AAAACAGCCTCACCG GACGCCCGCC GAT GGCGGTCGGC TTTGATATTGACGAC aphA 4405301 - 4406014 + | acid phosphatase/phosphotransferase TERM 5779 4406042 - 4406018 - f 73 -4.2 -4.77036 | opp_overlap 4406021, overlap 4406019 4406021 TCGGAGTACTAAAAA TCAGGAGAGC GTCAG GCTCTCCTTT TTTGCATGATTTTTG TERM 5780 4406021 - 4406039 + F 100 -10.3 -5.13521 | opp_overlap 4406019 4406018 4406021 GAGTACTAAAAATCA GGAGAGC GTCAG GCTCTCC TTTTTTGCATGATTT TERM 5781 4406039 - 4406021 - f 74 -10.3 -3.29543 | opp_overlap 4406021, overlap 4406019 4406018 GAGTACTAAAAATCA GGAGAGC GTCAG GCTCTCC TTTTTTGCATGATTT TERM 5782 4406188 - 4406209 + G 73 -10.3 -3.38118 | GAGAAGCCGCGCGGG TTTCATCTG ATAA CAGATGAAA TTATCGATAAATTGT yjbQ 4406143 - 4406559 + | hypothetical protein yjbR 4406562 - 4406918 + | hypothetical protein SC4131 4407257 - 4406919 - | hypothetical protein SC4132 4407699 - 4407244 - | putative outer membrane lipoprotein TERM 5783 4407827 - 4407792 - R 100 -9.7 -4.77036 | opp_overlap 4407790, overlap 4407795 4407796 TGGGATGAGGAAAAA TGATGCCGCTTCCCG GCGAAT CGGAAAGCGGCGTGA AGGTTATTTGAGCAT TERM 5784 4407824 - 4407795 - R 77 -11.4 -3.29543 | opp_overlap 4407790, overlap 4407792 4407796 GATGAGGAAAAATGA TGCCGCTTCCCG GCGAAT CGGAAAGCGGCG TGAAGGTTATTTGAG TERM 5785 4407823 - 4407796 - R 86 -14.9 -2.57003 | opp_overlap 4407790, overlap 4407795 4407792 ATGAGGAAAAATGAT GCCGCTTCCCG GCGAAT CGGAAAGCGGC GTGAAGGTTATTTGA uvrA 4410656 - 4407831 - | excinuclease ABC subunit A TERM 5786 4409730 - 4409716 - G 74 -2.8 -4.84363 | overlap 4409718 TGAAAGTAGTAAAAA TTGCGA CGA TCCCAA CCACGAATCGCGCCG TERM 5787 4410486 - 4410468 - G 72 -2.4 -4.88736 | gap 1 CATGAGCGACAAAAA CTGCCGC GCGTAA GCGG-AG AGCGATTCAACGTAA ssb 4410904 - 4411434 + | single-strand DNA-binding protein TERM 5788 4411495 - 4411514 + F 100 -12.2 -4.69053 | opp_overlap 4411495 4411508, overlap 4411508 TCTCGTCTGCTGAAA TGCCTGGT GTAA ACCAGGCA TTTTCTTACCTGGTA TERM 5789 4411514 - 4411495 - f 88 -12.2 -3.53012 | opp_overlap 4411495 4411508, overlap 4411508 TCTCGTCTGCTGAAA TGCCTGGT GTAA ACCAGGCA TTTTCTTACCTGGTA SC4135 4411902 - 4412066 + | hypothetical protein TERM 5790 4412248 - 4412276 + F 74 -6.8 -4.30719 | opp_overlap 4412251, overlap 4412251 ACCTAATTAAAAAAT GAAGAGTGTTTT TAATT AAAGCACTCATC TTTGTTGTGGGCGCA TERM 5791 4412292 - 4412314 + F 72 -2.8 -4.98255 | TTTGTTGTGGGCGCA TAAAAATGGC GTC GTTGTTTTTA TTTTTCTGATTACGA TERM 5792 4412909 - 4412892 - g 70 -2.8 -4.73682 | GGTTAGAAGACAAAA TCAATA GTAATT TATTGA TAGAAATGGTTATTC SC4136 4412474 - 4413106 + | hypothetical protein mac 4413103 - 4414491 + | putative methyl-accepting chemotaxis protein SC4138 4414481 - 4415800 + | ABC transporter outer membrane protein SC4139 4415797 - 4417074 + | membrane permease, cation efflux pump TERM 5793 4417745 - 4417732 - g 79 -3.1 -5.14163 | ACCTATTAATAAAAA TACCA GTAC TGGCA AAAGTAATAGCAGTA TERM 5794 4418235 - 4418225 - g 75 -6.8 -4.39998 | opp_overlap 4418224 TATGTAGATAATAAA CTGG TTG CCAG CGTTGATGTCGATAA TERM 5795 4418647 - 4418658 + G 73 -5.8 -4.44797 | GCATACATCAGCGAC GGCA AATC TGCC TTTTACTATTGATAC TERM 5796 4419878 - 4419863 - g 74 -4.7 -4.81851 | ACGCAAACGCAAAAA CCAAC AATAGA GTTGG TCAACGATACGGGGG TERM 5797 4423739 - 4423721 - g 74 -3 -4.8622 | overlap 4423723 4423724 GCGGGGAACGAAAAA CACTCAGC GTC GCTGACGG TCACTGTTGATACCC TERM 5798 4426622 - 4426608 - g 70 -7.1 -4.11394 | ACGGCACGTTTAAAA CGGTG GTACT CACCG AATCAGCCGACGGCT TERM 5799 4428807 - 4428821 + G 71 -7.2 -3.96624 | opp_overlap 4428796 AAGAGGTATCATTCA CAATAG ACA CTATTG TTTCTGATCCCAGTA TERM 5800 4432742 - 4432732 - g 81 -2.4 -5.43866 | opp_overlap 4432732 TAATGCTGAAAAAAA TGCC GAT GGCG TTTGGTTCTTTACGC SC4140 4417091 - 4433770 + | putative inner membrane protein TERM 5801 4433779 - 4433802 + F 95 -12.4 -4.00868 | opp_overlap 4433778 4433775 4433771, overlap 4433780 CGCATAATAACGGAG GCCCCTCACC TTTG GGTGAGGGGG TTTACTTATGGATAA TERM 5802 4433780 - 4433801 + F 93 -15.9 -3.00039 | opp_overlap 4433778 4433775 4433771, overlap 4433779 GCATAATAACGGAGG CCCCTCACC TTTG GGTGAGGGG GTTTACTTATGGATA SC4141 4433810 - 4435876 + | bacteriocin/lantibiotic ABC transporter TERM 5803 4435916 - 4435956 + T 93 -13.6 -3.55444 | opp_overlap 4435926, overlap 4435926 TCAGGTGGTACTGCT TAATAAAAAAGACCCGTT GCACA AACGGGTCTTTTTTGTCA TTTAACGAGTCGGCA TERM 5804 4435946 - 4435926 - T 100 -11.2 -5.4505 | opp_overlap 4435916 4435926 CTGCTTAATAAAAAA GACCCGTT GCACA AACGGGTC TTTTTTGTCATTTAA TERM 5805 4435926 - 4435946 + T 100 -11.2 -5.42265 | opp_overlap 4435926, overlap 4435916 CTGCTTAATAAAAAA GACCCGTT GCACA AACGGGTC TTTTTTGTCATTTAA yjcB 4436525 - 4436154 - | hypothetical protein TERM 5806 4437534 - 4437546 + G 77 -4.8 -4.88067 | GGGAATGTATGATAC GGTG ACCAA CACC TTTTTCTCCCTGAGT TERM 5807 4437918 - 4437957 + G 70 -6.6 -4.1822 | gap 2 CGAAGCGCTATTGCG TTGGC-CGGGCT-ATCAC GGTCCG GTGATGAGCCCGTGCGAA TTTATTCCGCTGGCG TERM 5808 4438580 - 4438553 - g 91 -11.2 -4.30719 | overlap 4438554 CCTGGCTACAACAAA CGCCCGCGCCTC TGAC GATACGCGGGCA GACGCCCTACAGGCG TERM 5809 4438579 - 4438554 - g 83 -12.5 -3.1811 | overlap 4438553 CTGGCTACAACAAAC GCCCGCGCCTC TGAC GATACGCGGGC AGACGCCCTACAGGC yjcC 4436977 - 4438599 + | putative diguanylate cyclase/phosphodiesterase soxS 4438910 - 4438587 - | DNA-binding transcriptional regulator SoxS soxR 4438997 - 4439455 + | redox-sensing transcriptional activator SoxR TERM 5810 4439516 - 4439491 - f 95 -13.4 -4.1899 | opp_overlap 4439491, overlap 4439496 TGAGTTCACCTAAAA CTAAAGCGCC GCTAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5811 4439491 - 4439516 + F 100 -13.4 -4.4572 | opp_overlap 4439491 4439496 TGAGTTCACCTAAAA CTAAAGCGCC GCTAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5812 4439511 - 4439496 - f 76 -7.5 -4.21922 | opp_overlap 4439491, overlap 4439491 TCACCTAAAACTAAA GCGCC GCTAAG GGCGC TTTAGTTTGTTTCCG TERM 5813 4440012 - 4439997 - g 74 -10.4 -3.55563 | ATCGGACGCTTTAAA CCTGCG GATG CGCAGG GGAAACAACACTATC gth 4439748 - 4440416 + | putative glutathione S-transferase TERM 5814 4441282 - 4441263 - g 74 -4.8 -4.72272 | CCTGGTCATTAAAAA CCCGCTGG ATGG CCTGCCGG TCGCGCTGGGCGATT TERM 5815 4442068 - 4442084 + G 74 -4.3 -4.82901 | GGAACTGTCGTCATT GCGGTCG CGC TGGTCGC TTTTTATGCCGGCGG yjcD 4440763 - 4442112 + | xanthine/uracil permease family TERM 5816 4442127 - 4442159 + F 100 -13.6 -4.07885 | gap 1, opp_overlap 4442134, overlap 4442134 GTTCTGCCTTCATTC TGAAAAACGGGCGGC GTTG GTCGCCCGTTTT-CA TTTTCAGGACACATC TERM 5817 4442153 - 4442134 - f 93 -10.6 -4.59773 | opp_overlap 4442127 4442134 CTTCATTCTGAAAAA CGGGCGGC GTTG GTCGCCCG TTTTCATTTTCAGGA TERM 5818 4442134 - 4442153 + F 100 -12.8 -4.67038 | opp_overlap 4442134, overlap 4442127 CTTCATTCTGAAAAA CGGGCGGC GTTG GTCGCCCG TTTTCATTTTCAGGA TERM 5819 4442380 - 4442396 + G 70 -6.5 -4.09556 | overlap 4442381 4442391 TCGCCATTGGCGCGC TGTTGGC GTG GCCGACG TTTGGTTTGCATGTG TERM 5820 4442754 - 4442812 + G 70 -9.4 -3.62746 | opp_overlap 4442754 4442755 CTGGTATCGCTGAAA TTCGCCGTCGCGGTGGCGATGGGGACGA TGG TCTTTACCGTCGGCGGCGCGACGCTGGA ATTTTTTAAGGTCGC yjcE 4442217 - 4443908 + | CPA1 family, Na:H transport protein TERM 5821 4443932 - 4443963 + T 71 -10.2 -2.71011 | opp_overlap 4443952 GCCCGGTGGCGCCAT GCTTATCGGGCCTA CAAG TAGGCCGGATAAGG TGCTTGCGCCGCCAT ywbI 4444890 - 4444003 - | LysR family transcriptional regulator ywbH 4444994 - 4445404 + | hypothetical protein TERM 5822 4445878 - 4445897 + G 76 -5 -4.73448 | gap 1, overlap 4445880 4445889 4445893 CTGGCGTGTTTGGCA TGGCG-GTC GGC GACGCGCTA TTTTTGCGTCTCTCT ywgG 4445397 - 4446086 + | hypothetical protein actP 4447774 - 4446125 - | acetate permease yjcH 4448088 - 4447771 - | hypothetical protein TERM 5823 4448007 - 4448022 + g 73 -5.4 -4.64598 | overlap 4448008 TAACCGACAGAATCG TGGCAA ACCG TTGCCG TTTTTCAACTAATTC TERM 5824 4448146 - 4448188 + r 73 -11.3 -2.53213 | gap 1, overlap 4448151 GCGTTGGCCGCACTC GCGCGCCC-CAGCCACATAG TGAA CTATGCTGCTGAGGGTGTGC TCGCTTGCCGCCTTC acs 4450283 - 4448325 - | acetyl-CoA synthetase TERM 5825 4450001 - 4450017 + g 84 -8.7 -4.26076 | opp_overlap 4450001 CGCCTTCCCAGATAA TGGCGGT GCG ATCGCCA TTTTCCTGCAAATGG ecnB 4450470 - 4450616 + | putative entericidin B precursor TERM 5826 4450696 - 4450675 - f 91 -7.3 -5.4588 | overlap 4450665 4450676 GAAAACGATAAAAAA TCGCCATTA AAGA TAATGGCGC AATCTGGATGAGAGC TERM 5827 4450695 - 4450676 - f 84 -10.8 -3.85088 | overlap 4450665 4450675 AAAACGATAAAAAAT CGCCATTA AAGA TAATGGCG CAATCTGGATGAGAG TERM 5828 4450857 - 4450840 - g 72 -4.1 -4.74103 | TGTGGAAGCGAAAAA TGAAACG TTCG CGCCTCA ACACCCCGACCAATA TERM 5829 4452106 - 4452096 - g 70 -6.8 -4.08945 | AGGACTTCCTGAAAA CGGT CGT ACCG CAGTGGGAAGATCAG nrfA 4450715 - 4452151 + | cytochrome c nitrite reductase nrfB 4452196 - 4452762 + | cytochrome c-type protein NrfB TERM 5830 4453258 - 4453242 - g 76 -10.8 -3.71108 | opp_overlap 4453241 4453237, overlap 4453231 4453251 AAAATCAACCTGAAA GCGGGC AAACA GCCCGC CTGCGTTGAGTCATG nrfC 4452759 - 4453430 + | putative nitrite reductase; formate-dependent, Fe-S centers TERM 5831 4453782 - 4453770 - g 71 -4.9 -4.56597 | TGTGGCTGGCAAAAA TCTTT GAA AAAGA GGTGATTGCCCTGCA TERM 5832 4454330 - 4454344 + G 76 -3.4 -5.05712 | GCCAGTTTGACCGGC GTGCTG CTG CTGCGC TTTTTCATTCTTTAT nrfD 4453427 - 4454383 + | putative nitrate reductase, formate dependent TERM 5833 4456442 - 4456421 - g 72 -3.6 -4.74103 | overlap 4456425 4456432 GGCCGAAGGTAAAAA CGAAGCGG AAATCA CCGCCTGG ATGACCGACCGTTAT nrfE 4454376 - 4456598 + | formate-dependent nitrite reductase; involved in attachment of haem c to cytochrome c552 TERM 5834 4456833 - 4456815 - g 85 -2.4 -5.4505 | gap 1, overlap 4456816 GGCTGCAAGAAAAAA TCC-GCG CCAATC CGCAGGA TAGAGAGCAATGGGC nrfG 4456595 - 4457215 + | formate-dependent nitrite reductase complex subunit NrfG SC4162 4457483 - 4457355 - | hypothetical protein TERM 5835 4458179 - 4458190 + G 83 -7.2 -4.63527 | overlap 4458178 TGGTGATGCGCTATG CGCC AGTG GGCG TTTTTGCGCTGATCG TERM 5836 4458834 - 4458817 - g 86 -6.9 -5.0538 | TTTGACCGCAAAAAA GCGCTGG CCTA CGAGCGC GACGTGCTGGGCAAA gltP 4457560 - 4458870 + | glutamate/aspartate:proton symporter yjcO 4459717 - 4459028 - | TPR repeat-containing protein TERM 5837 4459520 - 4459537 + g 75 -6.2 -4.57073 | overlap 4459519 CGCGCAGGCGTCGGC GTCGCC ACTGTC GGCGGC TTTTTGCGCCCAGTA TERM 5838 4459713 - 4459723 + g 75 -4 -4.88918 | AATGCAAGAAGTAGT TTCA TTT TGAA TTTTATTTAGGGTAC TERM 5839 4459777 - 4459796 + r 86 -13.6 -3.29144 | opp_overlap 4459777 GTATGGATAAAAAAA CAGCCTCC GGGC GGAGGCTG TTATAGGGAAAATGC TERM 5840 4459796 - 4459777 - R 100 -13.6 -5.64274 | opp_overlap 4459777 GTATGGATAAAAAAA CAGCCTCC GGGC GGAGGCTG TTATAGGGAAAATGC TERM 5841 4460180 - 4460213 + r 82 -11.1 -3.57144 | gap 1 ACCAGCGCTTCATCT TCAATGCC-CAGACGC GCG GCGTCGGCGGTATTGA TTTGCGCATAGCCCG TERM 5842 4460727 - 4460738 + r 74 -7.2 -4.30576 | opp_overlap 4460719 GTAAAATCACATCCG CCGC CGAC GCGG TTTTGGTCATGAAGA TERM 5843 4462392 - 4462359 - R 95 -14.6 -3.55219 | gap 1, overlap 4462346 4462347 AACGCCAGGATAGAA CAGGCCGCGGCA-GG CAGTT CCATACCGCGGCCCG GCTTCAGAGGAGGCT lpxO 4463304 - 4462396 - | putative dioxygenase for synthesis of lipid phnO 4464026 - 4463562 - | aminoalkylphosphonic acid N-acetyltransferase phnB 4464591 - 4464148 - | hypothetical protein phnA 4465046 - 4464711 - | hypothetical protein TERM 5844 4465749 - 4465761 + G 70 -6.9 -4.1421 | overlap 4465750 TCCCTTCCTGATTCG TCCGC TCG GCGGG TTATTCTTTGGTATG TERM 5845 4466864 - 4466854 - g 77 -8.2 -4.08064 | overlap 4466855 AATCGTCCGCTAAAA GGCG CAA CGCC AGCGGCGTCGGACAT proP 4465513 - 4467015 + | proline/glycine betaine transporter TERM 5846 4467127 - 4467143 + T 72 -5.1 -4.6645 | overlap 4467128 ACGACCCTGTGTAGT GTGCTGA TTG TCAGCAG TTTTATCTATGTGTG TERM 5847 4467204 - 4467219 + T 77 -9 -3.96483 | opp_overlap 4467199, overlap 4467199 TTTTTCAACAGCACC CAGGCA CGGG TGCCTG TTCTTTCCGTACGGT basS 4468261 - 4467182 - | sensor protein BasS/PmrB TERM 5848 4467900 - 4467952 + g 73 -5.5 -4.66833 | gap 1 TCAATCTCAAGCGTG GAGCTGTGAATGGCGATCGGCG CCAGATTATC CGCCGTCCGCGCTTC-CAGCTC TTTTTGCAGTTCGGC basR 4468930 - 4468262 - | DNA-binding transcriptional regulator BasR yjdB 4470570 - 4468927 - | putative cell division protein TERM 5849 4469852 - 4469822 - G 80 -9.1 -4.2074 | gap 1, opp_overlap 4469823, overlap 4469818 CCGCCAAGAGAGAAA TCATCGCCGCGCGA GGTT TCGC-CAACGATGA GAATCGTCAGGTTTT TERM 5850 4470323 - 4470299 - G 77 -4.1 -5.13343 | overlap 4470301 4470302 TAAGTCAAAATAAAA TACTGCGCGGC AGC GCCGACCAGAA TAAAAACGCAGGCCA TERM 5851 4470311 - 4470301 - G 70 -6.8 -4.17301 | overlap 4470299 4470302 AGTCAAAATAAAATA CTGC GCG GCAG CGCCGACCAGAATAA TERM 5852 4470651 - 4470676 + r 82 -13.3 -3.0634 | CTTAATGTTGGTGGC GGCCGGATAAC CTGC GCTATCCGGCC TGTTGCGATAACATT yjdE 4472041 - 4470704 - | arginine:agmatin antiporter adiY 4472942 - 4472181 - | transcriptional activator of AdiA TERM 5853 4473152 - 4473133 - R 100 -12.1 -5.60993 | TTTTGTATAAAAAAA GCGCGGG ATGGGG CCCGCGC AAAAAGGTATGACAG adi 4475501 - 4473231 - | arginine decarboxylase, catabolic; inducible by acid TERM 5854 4474586 - 4474603 + g 89 -3.4 -5.60993 | CGGCTTTAGTTTTGG TCAGTG GGCTGG CGCTGA TTTTTTTCTGCAAGG TERM 5855 4475198 - 4475210 + g 76 -5.5 -4.70659 | overlap 4475196 GCAGGTCGCGGTCCA GCGAT GCC GTCGC TTTTTCCCTGTCGCC TERM 5856 4475673 - 4475699 + r 80 -6.5 -4.8236 | TTGATAGCGAGCGAT TTCACCCGCCG TTTAT CGACAGGTGAA TTATTTTTTTGGCTG melR 4476807 - 4475731 - | DNA-binding transcriptional regulator MelR melA 4476932 - 4478287 + | alpha-galactosidase TERM 5857 4479153 - 4479169 + G 93 -8.7 -4.74706 | CTACTTCACCTATGT GATTGGC GAT GCCGATC TTTTTCCCTATTACC TERM 5858 4479589 - 4479603 + G 73 -5.7 -4.41137 | opp_overlap 4479588, overlap 4479582 CAGTCTGCGCAAACC CTGCA GGGGA TGCAG TTTATTATGATTGTC melB 4478371 - 4479801 + | melibiose:sodium symporter TERM 5859 4479854 - 4479829 - T 82 -11.9 -3.30124 | gap 1 GTGCAGGCCGGATAA GCCGGATAAGCG TAG CGC-CATCCGGC AATTAACCGATAACG fumB 4481545 - 4479899 - | fumarase B (fumarate hydratase class I), anaerobic isozyme dcuB 4482981 - 4481641 - | anaerobic C4-dicarboxylate transporter TERM 5860 4482077 - 4482088 + g 80 -4.4 -5.0538 | GCAATCATACCGGAA CGAA AAAC TTCG TTTTTTGAGATAGAC TERM 5861 4483221 - 4483241 + r 80 -6.9 -4.64024 | overlap 4483222 CAGTAAATTATGATT TGTCTGTTT TAA AAACAGGCG TTTATTCTTTAATTT TERM 5862 4483555 - 4483541 - R 100 -11.4 -4.98531 | opp_overlap 4483543 TTTTGAAATTAAAAA CAGCGC AGA GCGCTG TAATAATAGAAAATA dcuR 4484430 - 4483711 - | DNA-binding transcriptional activator DcuR dcuS 4486058 - 4484427 - | sensory histidine kinase DcuS TERM 5863 4484565 - 4484585 + g 71 -4.6 -4.58395 | opp_overlap 4484551 4484555 4484552, overlap 4484553 4484559 ACCGACGCCGCGTTC GGCGCCTT TCGAC GAGACGCC TTTTTCAAAAATCGC TERM 5864 4484880 - 4484862 - G 70 -3 -4.7497 | CTTACTGAGCAAAAA GCCAGCGA TAA TCGGCGAC TTTATTTTACCCAGC TERM 5865 4485818 - 4485777 - G 93 -4.3 -5.50774 | gap 1, opp_overlap 4485794, overlap 4485779 CACAATAAACAAAAA GCCATTATGCTGGCTCACCG CTT CGGCGAGCG-GCTGAATGCC GCTTTCCGCAGGCGG TERM 5866 4485794 - 4485833 + g 100 -14.3 -5.0133 | gap 1, opp_overlap 4485779 4485777 CATTATGCTGGCTCA CCGCTT-CGGCGAGCGGC TGAAT GCCGCTTTCCGCAGGCGG TTTTTTCAGCCCCTC TERM 5867 4486008 - 4485977 - G 100 -10.2 -5.10933 | gap 1, opp_overlap 4485976 4485975, overlap 4485962 GCACCGAAAACAAAA CGGCGCTGACCATCA GAA TGACGGT-AGTGCCG AGTTTCATGGGGCGT TERM 5868 4486463 - 4486448 - g 100 -5.4 -5.96894 | ATGGAAATAAAAAAA TGGCTG AACA CAACCA TAACCCGACGTGATG TERM 5869 4488429 - 4488445 + G 74 -6.5 -4.36914 | opp_overlap 4488420 4488429 CAGAAGGCGAGCGAA TTCCCGC ATT GCCGGAA TTTTGTCCGGCGAAA TERM 5870 4488714 - 4488758 + G 95 -14.2 -3.25942 | gap 1, overlap 4488739 TTTTACCCGGCGTGG CGGCGATGCCG-CAGGGCGCG TGGA CGCGGCTTGACGGCAACGGCG TTGATGTCGGCGGCT dmsA 4486433 - 4488862 + | putative anaerobic dimethyl sulfoxide reductase, subunit A dmsB 4488876 - 4489502 + | putative anaerobic dimethyl sulfoxide reductase, subunit B TERM 5871 4489539 - 4489551 + G 71 -6.2 -4.36554 | overlap 4489538 GGTCTTTACCCAGAG CGCG GTCGG CGCG TTTATTCTGCTGCTG SC4185 4489495 - 4490268 + | putative anaerobic dimethyl sulfoxide reductase, subunit C TERM 5872 4490257 - 4490268 + F 70 -2.2 -5.01732 | TACAATCTGTGGACG CTGC CAAT GTAG TTTTTTGCCCGGCTT TERM 5873 4490632 - 4490645 + G 76 -3.1 -5.0538 | gap 1 ATGGGGGAAACTACC GC-CGA TTA TCGAGC TTTTTTACAGTCGCA ynfI 4490284 - 4490937 + | hypothetical protein TERM 5874 4490985 - 4491012 + T 80 -12.7 -2.95073 | overlap 4490977 4490982 4490985 TACTTGTGCCGCCAT CGTGCCCGCTG TTGCGT CAGCGGGCACA GTTTACTATTACAGC TERM 5875 4490985 - 4491013 + T 95 -12.5 -3.92592 | gap 1, overlap 4490977 4490982 4490985 TACTTGTGCCGCCAT C-GTGCCCGCTG TTGCGT CAGCGGGCACAG TTTACTATTACAGCT SC4187 4492421 - 4491021 - | hypothetical protein TERM 5876 4492751 - 4492726 - g 74 -7.5 -4.16842 | opp_overlap 4492725, overlap 4492727 TTTATTTTTAAGAAA TGCGTTACGAC ATCA GTCGTGACGCG ATCTGCTATGGATTT TERM 5877 4492750 - 4492727 - g 72 -11 -3.09784 | opp_overlap 4492725, overlap 4492726 TTATTTTTAAGAAAT GCGTTACGAC ATCA GTCGTGACGC GATCTGCTATGGATT TERM 5878 4493343 - 4493333 - g 76 -5.4 -4.79826 | AGAGATGAGCAAAAA TGGT ATC ACCA GAGCGTTGCCTTCTG yjiK 4492725 - 4493630 + | hypothetical protein TERM 5879 4493799 - 4493818 + T 100 -10.7 -6.24157 | GTCCTCCTCATATTT GCGGCAG CGTAGT CTGCCGC TTTTTTTTTATAAAT SC4189 4494533 - 4494144 - | putative cytoplasmic protein SC4190 4494843 - 4494556 - | LuxR family regulatory protein hilD 4495715 - 4494840 - | DNA-binding domain-containing protein TERM 5880 4495780 - 4495755 - R 72 -2.7 -4.98531 | overlap 4495748 4495758 4495770 CGTGTAAATCAAAAA TTATTCTGAAA AATA TTTCAAAAGAA AACTAATATATAGCT SC4192 4496202 - 4495981 - | putative cytoplasmic protein insF 4496512 - 4496820 + | transposase insF SC4194 4497385 - 4497585 + | hypothetical protein yggM 4497554 - 4498540 + | putative periplasmic protein TERM 5881 4498568 - 4498586 + T 79 -3.1 -5.42862 | ATGAGTGATAAAAAA GAGACTG AAATC TGGTCTC TTTTTTTGAGCCTGT TnpA 4498808 - 4498629 - | hypothetical protein TERM 5882 4498682 - 4498671 - G 71 -5.8 -4.33248 | GAACTCGATAATAAA GCGA CTCA TCGC CAGCCGCCAGTTCTG TERM 5883 4499212 - 4499188 - R 83 -10.1 -4.05747 | opp_overlap 4499188 4499184 4499192 4499193, overlap 4499192 TACAGTCCATATAAA CAAAGGGATAC AGC GTATCCATTTG TCGGTTTTGCCACTC TERM 5884 4499208 - 4499192 - R 72 -5.1 -4.62441 | opp_overlap 4499192 4499188 4499184 4499193, overlap 4499188 GTCCATATAAACAAA GGGATAC AGC GTATCCA TTTGTCGGTTTTGCC TERM 5885 4499452 - 4499472 + r 80 -6.9 -4.58395 | overlap 4499432 TGTTCAGTTCGATCT CGCTGTTAT TGC ATAACACCG TTTTTGACGAGTAGC phoN 4500569 - 4499817 - | non-specific acid phosphatase ompX 4500746 - 4500612 - | ail and ompX-like protein TERM 5886 4500668 - 4500657 - G 90 -5.8 -5.14477 | CATACAGGTAAAAAA GCAG GACG CTGC ACTGGTATTATTGTC TERM 5887 4500982 - 4500969 - g 87 -2.3 -5.72622 | overlap 4500970 CCGACAAAGAAAAAA TGCCA AAAC TGGCG AAGGGATTATTGTTT SC4199 4500968 - 4501111 + | hypothetical protein TERM 5888 4501273 - 4501244 - T 90 -14.5 -3.22906 | gap 1, opp_overlap 4501250, overlap 4501250 CCATTCCCAGAAAAG CA-AAAACCCAGCC ATA GGCTGGGTTTTCTG AATAAGTGGTGCCCG TERM 5889 4501250 - 4501266 + T 100 -13.7 -4.431 | opp_overlap 4501244 4501250 CCAGAAAAGCAAAAA CCCAGCC ATA GGCTGGG TTTTCTGAATAAGTG TERM 5890 4501266 - 4501250 - T 100 -13.7 -5.1417 | opp_overlap 4501250, overlap 4501244 CCAGAAAAGCAAAAA CCCAGCC ATA GGCTGGG TTTTCTGAATAAGTG TERM 5891 4501313 - 4501329 + T 73 -10.9 -2.62616 | opp_overlap 4501312 4501310 4501307 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yjdC 4502046 - 4501471 - | putative transcriptional regulator dipZ 4503786 - 4502083 - | thiol:disulfide interchange protein precursor TERM 5892 4502921 - 4502910 - G 81 -3.6 -5.18726 | opp_overlap 4502918, overlap 4502912 CCCCCATAACAAAAA CACC GCCG GGCG AACCGCCTTGCTGAC TERM 5893 4503691 - 4503679 - G 74 -2.6 -5.02421 | overlap 4503681 AAAATCAAAAACAAA CGCC CGGTC GGCA GGGACGAACTGCGAG cutA 4504109 - 4503762 - | divalent-cation tolerance protein CutA TERM 5894 4504219 - 4504197 - R 93 -14.8 -3.30635 | overlap 4504198 CAAAGGGCGGGAGAA TGCGGGGCGT GAT ACGCCCCGCG GGTGAAACACTTACA TERM 5895 4504218 - 4504198 - R 100 -18.3 -2.5806 | overlap 4504197 AAAGGGCGGGAGAAT GCGGGGCGT GAT ACGCCCCGC GGGTGAAACACTTAC dcuA 4505531 - 4504230 - | anaerobic C4-dicarboxylate transporter TERM 5896 4505601 - 4505625 + r 95 -12.9 -3.79251 | opp_overlap 4505603, overlap 4505603 CTTCTTGTAAGAAAA AAGGCACGTCA TCG TGACGTGCCTC TTTGGTACTACCCTG TERM 5897 4505603 - 4505623 + r 100 -15.5 -3.48024 | opp_overlap 4505603, overlap 4505601 TCTTGTAAGAAAAAA GGCACGTCA TCG TGACGTGCC TCTTTGGTACTACCC TERM 5898 4505623 - 4505603 - R 100 -15.5 -5.4505 | opp_overlap 4505603 4505601 TCTTGTAAGAAAAAA GGCACGTCA TCG TGACGTGCC TCTTTGGTACTACCC aspA 4507082 - 4505646 - | aspartate ammonia-lyase TERM 5899 4506511 - 4506523 + g 74 -7.7 -4.13282 | overlap 4506502 ACGGCGTCCTGCAAC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 5900 4506946 - 4506961 + g 74 -3.2 -4.92757 | opp_overlap 4506946, overlap 4506941 ATGCCACGCACAAAT TCAGGG ATGT CGCTGA TTTTGTTATTGCTAA SC4205 4507237 - 4507115 - | hypothetical protein TERM 5901 4507385 - 4507403 + H 73 -11 -2.52464 | opp_overlap 4507385 GCAACCCCATTCAAA TGGTCGTC GCA GACGGCCA TGACTTACAGGAGAG TERM 5902 4507403 - 4507385 - H 76 -8.8 -3.66874 | opp_overlap 4507385 GCAACCCCATTCAAA TGGTCGTC GCA GACGGCCA TGACTTACAGGAGAG TERM 5903 4507574 - 4507584 + G 72 -4 -4.77036 | TGGTACGTAACCAGG GTTT TAA AAAC TTTTTGCTGATGCAA TERM 5904 4507606 - 4507584 - g 75 -6.4 -4.57569 | overlap 4507585 CCAGGGTTTTAAAAA CTTTTTGCTG ATG CAACAAAAAA TGGCGGCCGGTGAGA TERM 5905 4507632 - 4507607 - g 85 -2.5 -5.4833 | gap 1, overlap 4507608 4507609 TGATGCAACAAAAAA TGGCGGCCGG TGAGAGC CCGGCGGC-A GAAATGATTAAGAGT TERM 5906 4507676 - 4507689 + G 71 -4.5 -4.61527 | overlap 4507685 TCGCTGGCTTACTGC TCCTG TTGC CGGGA TTTTTCACCGATTTT fxsA 4507423 - 4507899 + | FxsA yjeH 4509199 - 4507958 - | inner membrane protein YjeH TERM 5907 4509317 - 4509329 + H 74 -3.3 -5.08824 | opp_overlap 4509317 AACGTGAGATAAGTA GCGTT TTT ACCGC TTTTTTCGCTCAGAA groES 4509475 - 4509768 + | co-chaperonin GroES TERM 5908 4510823 - 4510795 - g 74 -9.5 -3.72374 | overlap 4510793 TGTGATCAACAAAGA CACCACCACCATC ATC GATGGCGTGGGTG AAGAAGCTGCCATCC groEL 4509812 - 4511458 + | chaperonin GroEL TERM 5909 4511595 - 4511630 + F 100 -18.4 -4.37971 | opp_overlap 4511601, overlap 4511601 TTATCTCCCAGAATT GAGAAACCCCCGGGCA GAAA TGACCGGGGGTTTTTC TTTTAGTCATCTTTT TERM 5910 4511601 - 4511624 + F 100 -13.8 -5.50723 | opp_overlap 4511601, overlap 4511595 CCCAGAATTGAGAAA CCCCCGGGCA GAAA TGACCGGGGG TTTTTCTTTTAGTCA TERM 5911 4511624 - 4511601 - f 100 -13.8 -4.00066 | opp_overlap 4511601 4511595 CCCAGAATTGAGAAA CCCCCGGGCA GAAA TGACCGGGGG TTTTTCTTTTAGTCA yjeI 4511684 - 4512055 + | hypothetical protein TERM 5912 4512058 - 4512108 + T 100 -10.7 -4.7373 | gap 2, overlap 4512060 4512069 4512071 ATGTCCGAATTGATA TGTCTGAATCGTAACGCCCTCTGAA AGA TTCAGAGGGCGATATGGTT-AG-CG TTTTTCCTGCGATGA TERM 5913 4512060 - 4512107 + T 85 -12.2 -3.43756 | gap 1, overlap 4512058 4512069 4512071 GTCCGAATTGATATG TCTGAATCGTAACGCCCTCTGAA AGA TTCAGAGGGCGATATGGTT-AGC GTTTTTCCTGCGATG TERM 5914 4512069 - 4512099 + T 100 -17 -2.79809 | overlap 4512060 4512058 4512071 GATATGTCTGAATCG TAACGCCCTCTGAA AGA TTCAGAGGGCGATA TGGTTAGCGTTTTTC TERM 5915 4512071 - 4512097 + T 93 -15.2 -2.93361 | overlap 4512069 4512060 4512058 TATGTCTGAATCGTA ACGCCCTCTGAA AGA TTCAGAGGGCGA TATGGTTAGCGTTTT yjeJ 4512960 - 4512103 - | hypothetical protein TERM 5916 4513196 - 4513210 + r 71 -3.6 -4.77438 | overlap 4513188 GGAGTCTCCTCGTAA TATTGC GCG GTAATA TTTTTCGTCGTCCCT yjeK 4514270 - 4513242 - | hypothetical protein TERM 5917 4513829 - 4513848 + g 74 -10 -3.75598 | CGGCGATATACTCCA GCGCGACT CTCC AGTTGCGC TTATTGCCTTGATTC TERM 5918 4514110 - 4514098 - G 78 -6.9 -4.63486 | overlap 4514099 4514100 ATGCGCGCAATAAAA GCGCG CGG CACGC GGAGGGCAAACAAGC efp 4514311 - 4514877 + | elongation factor P TERM 5919 4514894 - 4514921 + G 95 -6.2 -5.41143 | opp_overlap 4514897, overlap 4514895 4514897 TTATGTTATCGGGAA AAATGGTGCAGC GTAT GCTGCGCCATCC TTTTTTTCGCGCCTC TERM 5920 4514895 - 4514920 + G 76 -9.7 -3.83963 | opp_overlap 4514897, overlap 4514894 4514897 TATGTTATCGGGAAA AATGGTGCAGC GTAT GCTGCGCCATC CTTTTTTTCGCGCCT TERM 5921 4514918 - 4514897 - g 91 -10.1 -4.59773 | opp_overlap 4514895 4514894 4514897 TGTTATCGGGAAAAA TGGTGCAGC GTAT GCTGCGCCA TCCTTTTTTTCGCGC TERM 5922 4514897 - 4514918 + G 81 -12.3 -3.49966 | opp_overlap 4514897, overlap 4514895 4514894 TGTTATCGGGAAAAA TGGTGCAGC GTAT GCTGCGCCA TCCTTTTTTTCGCGC ecnA 4514881 - 4515072 + | putative entericidin A precursor TERM 5923 4515264 - 4515250 - g 72 -11.4 -3.02461 | overlap 4515253 TAACTGCTTGTAATA CCACGC GCG GCGTGG GCGAGGACATCTCGG SC4215 4515180 - 4515326 + | entericidin B membrane lipoprotein TERM 5924 4515327 - 4515364 + T 79 -8.6 -4.36914 | gap 1, opp_overlap 4515330 4515334, overlap 4515334 AGAGCTCAGCAGTAA TC-ATCAACGGTACGGC ATGGC GTCGTACCGTTAATCGA TTTTCTCCGGAAGCA TERM 5925 4515360 - 4515330 - T 74 -11.2 -2.80016 | opp_overlap 4515327 4515334, overlap 4515334 GCTCAGCAGTAATCA TCAACGGTACGGCA TGG CGTCGTACCGTTAA TCGATTTTCTCCGGA TERM 5926 4515334 - 4515356 + T 77 -11.3 -3.28857 | opp_overlap 4515334 4515330, overlap 4515327 AGCAGTAATCATCAA CGGTACGGC ATGGC GTCGTACCG TTAATCGATTTTCTC TERM 5927 4515356 - 4515334 - T 71 -9.8 -3.29364 | opp_overlap 4515327 4515334, overlap 4515330 AGCAGTAATCATCAA CGGTACGGCA TGG CGTCGTACCG TTAATCGATTTTCTC ecnR 4516001 - 4515357 - | LuxR family regulatory protein sugE 4516200 - 4516517 + | quaternary ammonium compound-resistance protein SugE blc 4517067 - 4516534 - | outer membrane lipoprotein Blc TERM 5928 4516600 - 4516611 + g 83 -5.8 -4.93877 | overlap 4516585 CCGGGTCGCGACGGC CAGC ATTT GCTG TTTTATTTCCTCAGA TERM 5929 4517047 - 4517029 - G 100 -8.8 -4.93365 | overlap 4517040 GGCGACAACCAAAAA TGCCGCAG TAA CCGCAGCA ACGACGGGCAGCAAG TERM 5930 4517168 - 4517140 - R 100 -17.6 -5.83211 | CAGGAAAAGAAAAAA CGCCCTCTTATC GGGTA GATAAGAGGGCG TCGTGGCAACTTAGA frdD 4517538 - 4517179 - | fumarate reductase subunit D TERM 5931 4517405 - 4517387 - G 70 -6.6 -4.08945 | overlap 4517388 4517391 AGTACGCGCTCAAAA CTCAGGGC ATC GCCCGGAA ATAGCCCCAGCGGCA TERM 5932 4517468 - 4517436 - G 76 -12.7 -2.74012 | GCATGATGCTAACCA GTAGCACGATCACCG GCG CGATGATCGCGCCCC ACATACCGCCTGCGC frdC 4517944 - 4517549 - | fumarate reductase subunit C frdB 4518689 - 4517955 - | fumarate reductase iron-sulfur subunit frdA 4520556 - 4518682 - | fumarate reductase flavoprotein subunit yjeA 4520795 - 4521772 + | lysyl-tRNA synthetase TERM 5933 4521803 - 4521819 + F 86 -9.4 -4.43221 | opp_overlap 4521803 TTTCGCGAGATAAAA TGGCGC AATAA GCGCCA TTTTGTAGCATATTT TERM 5934 4521819 - 4521803 - f 86 -9.4 -4.52589 | opp_overlap 4521803 TTTCGCGAGATAAAA TGGCGC AATAA GCGCCA TTTTGTAGCATATTT TERM 5935 4522039 - 4522018 - g 90 -4.4 -5.34555 | opp_overlap 4522023 CCACACGATAAAAAA GATGAGCC TTATTG GGCTTATC CTGATGATTTTTACT TERM 5936 4522131 - 4522141 + G 85 -2.4 -5.5074 | CGTGGTATATATTTT CTGC CTT GCTG TTTTTTATTCCATTC TERM 5937 4522524 - 4522538 + G 80 -5 -4.91084 | ATTTAGTTTTATTGT TAGTGA GTG TCGCTA TTTTGTTATTAAATG TERM 5938 4523404 - 4523419 + G 73 -9 -3.90241 | CAGCGCTTTGTGGAT GATCGG CGGC CCGATC TTCTTCTCGTTGCTG yjeM 4521998 - 4523500 + | amino acid APC transporter yjeO 4523552 - 4523866 + | putative inner membrane protein yjeP 4527259 - 4523933 - | hypothetical protein TERM 5939 4524449 - 4524464 + g 80 -9 -4.07885 | AATGGTCACCGTATC GCCGAT ACGA ATCGGC TTTTCAAACAAAATA TERM 5940 4525297 - 4525309 + g 100 -10.5 -5.03314 | opp_overlap 4525295 4525293 4525291 4525297 CTTTATCAAGATAGA GCGGG ATG CCCGC TTTTTTCAGACTCAG TERM 5941 4526776 - 4526822 + g 93 -10.9 -4.4261 | CGGCACTTCCGCCTG CGGCGCCGAGCCGTC-GCTCAAT CTC ATTAAGCTGGCGGCG-GGCGTCG TTTTGCTGTTGGGGA psd 4528246 - 4527278 - | phosphatidylserine decarboxylase yjeQ 4529390 - 4528338 - | ribosome-associated GTPase orn 4529497 - 4530042 + | oligoribonuclease artJ 4530823 - 4530104 - | putative arginine-binding periplasmic protein TERM 5942 4531161 - 4531145 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5943 4531393 - 4531377 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5944 4531451 - 4531437 - RH 72 -8.6 -3.76413 | CTCCAAAATTTGAAA GTGCTT GTT AAGCAC AGACCACCAATCGCA TERM 5945 4531625 - 4531609 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA yjeS 4533115 - 4531928 - | putative Fe-S protein TERM 5946 4533410 - 4533432 + GH 73 -11.3 -2.58822 | overlap 4533393 4533409 4533407 TGCCTGGCTGAATGC CGGCGGCAT TATCC ATGCTGCCG ATATTATCTGGCCGG TERM 5947 4533748 - 4533760 + GH 87 -10.5 -4.07568 | TGGCGAGCCAGACGC CGCCG CTC CGGCG TTTTGACGCGACGCA yjeF 4533066 - 4534613 + | hypothetical protein TERM 5948 4534786 - 4534763 - gf 72 -3.8 -4.74504 | ACGGTAATGTAAAAA GCCCCACC TATACGCT GGTAGAGC CTTATGCGCTTGATA yjeE 4534585 - 4535046 + | putative ATPase TERM 5949 4535329 - 4535313 - g 74 -7.9 -4.10007 | ACAATCTGGTGAAAA CGATCCG TGC CGGAACG CCGAAAGATGCGCAA amiB 4535063 - 4536385 + | N-acetylmuramoyl-l-alanine amidase II TERM 5950 4536447 - 4536435 - g 73 -9.1 -3.90291 | opp_overlap 4536441 AGCTTGCGAACCAAA TCGCC GCT GGCGA AGTGGTGGAACGCCC TERM 5951 4536617 - 4536590 - g 79 -3.2 -5.14563 | overlap 4536593 TGCGGCATTAAAAAA GAGGAGCTGGCG CTGG CGCTGGCCCGTC ATGCCACCAGTAAAA TERM 5952 4537036 - 4537019 - g 71 -4.8 -4.60889 | gap 1, overlap 4537021 AAGGACGGGCAAAAA GAGCGCC GGTTA GGCGC-C ATCTGCGGCACGCCG TERM 5953 4537035 - 4537021 - g 71 -8.5 -3.91506 | overlap 4537019 GGACGGGCAAAAAGA GCGCC GGTTA GGCGC CATCTGCGGCACGCC TERM 5954 4537907 - 4537895 - g 70 -3.3 -4.7254 | overlap 4537881 AGCGCCGATGAAAAA GCCGC GCT GCAAC AAGCCCAATCTTTGT mutL 4536395 - 4538251 + | DNA mismatch repair protein miaA 4538244 - 4539194 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 5955 4539305 - 4539332 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4539304 4539301, overlap 4539298 AATCTTTACAAGATC CGTTCCTGAACGC ATT GCGT-CGGGAACG TGTTCCAGTTTCTAT hfq 4539277 - 4539585 + | RNA-binding protein Hfq TERM 5956 4540402 - 4540429 + G 74 -10.6 -3.53563 | TCGGTGAAACCGTTC TGGCGGATACGG TAGG CTTTATCCGCCA TTTACCGCACGATCT TERM 5957 4540702 - 4540665 - g 70 -5 -4.4768 | gap 3, opp_overlap 4540696 GATGAAGAGAATAAA CCCA-TCCGCGTTTG-GCT TTC AGCGCAAA-GCGGCGTGGG AATACCACAGCTTTT TERM 5958 4540753 - 4540768 + G 74 -10.4 -3.53012 | opp_overlap 4540762, overlap 4540752 TTTCCGGCGAGGTGG CGCAGC ATAC GCTGCG TTTGCCGCCGCAGGA hflX 4539657 - 4540937 + | putative GTPase HflX TERM 5959 4541469 - 4541458 - g 71 -7.2 -4.03811 | opp_overlap 4541457 4541458 4541464 4541468 TATACCATTAAAGAA GCCG AGCG CGGC GTTGTGACGCGTTTT TERM 5960 4541464 - 4541480 + G 71 -5.7 -4.30978 | opp_overlap 4541458, overlap 4541458 4541457 4541468 ATTAAAGAAGCCGAG CGCGGCG TTG TGACGCG TTTTGGTAAATTCAG TERM 5961 4542383 - 4542364 - g 83 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC GAAT GCGCAGCG TAACGACTACCAGCG hflK 4541152 - 4542411 + | FtsH protease regulator HflK TERM 5962 4542495 - 4542511 + G 77 -7.2 -4.28762 | GTCAAAGAGGGCGAG CGCGGC ATTAC GCTGCG TTTTGGTAAAGTTCT hflC 4542414 - 4543418 + | FtsH protease regulator HflC TERM 5963 4543444 - 4543479 + F 100 -14.2 -4.37092 | gap 1, opp_overlap 4543449, overlap 4543449 GCGGTTTTAGACCAG CAAAACCACCG-CATCC AAA GGATGCCGGTGGTTTTC TTTTATAAGGGCGAT TERM 5964 4543474 - 4543449 - f 100 -14.1 -4.33274 | gap 1, opp_overlap 4543449 4543444 TTTAGACCAGCAAAA CCACCG-CATCC AAA GGATGCCGGTGG TTTTCTTTTATAAGG TERM 5965 4543449 - 4543474 + F 100 -14.1 -5.18371 | gap 1, opp_overlap 4543449, overlap 4543444 TTTAGACCAGCAAAA CCACCG-CATCC AAA GGATGCCGGTGG TTTTCTTTTATAAGG yjeT 4543497 - 4543694 + | putative inner membrane protein TERM 5966 4544167 - 4544157 - g 71 -8.2 -3.86194 | overlap 4544158 AACGCGTGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 5967 4544312 - 4544280 - g 73 -5.6 -4.56775 | opp_overlap 4544280 4544302, overlap 4544303 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4543797 - 4545095 + | adenylosuccinate synthetase TERM 5968 4545150 - 4545184 + F 78 -11.6 -3.10975 | gap 1 CAGTGTGATACATTG CTGTGTCGGGTAAGC CATTAC GCT-ATCCGACACAG TGTTAAATCCTCGCT TERM 5969 4545501 - 4545487 - g 86 -7 -5.00616 | overlap 4545488 CGTTCGGGGAAAAAA TGGCGG TAT CCGCCT GGGTAAACCGGCTAA TERM 5970 4545500 - 4545488 - g 74 -10.5 -3.60048 | overlap 4545487 GTTCGGGGAAAAAAT GGCGG TAT CCGCC TGGGTAAACCGGCTA yjeB 4545302 - 4545727 + | transcriptional repressor NsrR TERM 5971 4545889 - 4545864 - g 81 -6.8 -4.71482 | overlap 4545865 ACGAAACGTGAAAAA CCGGCCAGTC GCGAAG AACTGGCCGT AGAATTGAATATTGA TERM 5972 4545888 - 4545865 - g 73 -10.3 -3.41804 | overlap 4545864 CGAAACGTGAAAAAC CGGCCAGTC GCGAAG AACTGGCCG TAGAATTGAATATTG TERM 5973 4546027 - 4546054 + G 77 -7.8 -4.23213 | gap 1, opp_overlap 4546024 4546027 ACCTGCTGAAAGGCA CCGTGATCGGTCA TCG TGA-CGGTTACGG TTTCTTACGTGTCGA TERM 5974 4548025 - 4548011 - g 76 -2.7 -4.99134 | AGGTGAAAGTAAAAA CGCCG GTAAA CGTCG TCAGGTAGGTAAAAA TERM 5975 4548165 - 4548151 - g 71 -4.2 -4.54477 | overlap 4548153 CTAAAACGCAGAAAA TAGCCG CAG CGACCA AAGCGAAGCGTGCGG vacB 4545765 - 4548203 + | exoribonuclease R TERM 5976 4548210 - 4548230 + F 73 -11.2 -2.64877 | opp_overlap 4548208 4548210, overlap 4548207 4548206 GCAGAGTGAGCAATA CCCTCTTC AAACA GAAGAGGG TGAATTATCTGTAGG TERM 5977 4548230 - 4548210 - f 77 -11.2 -3.16492 | opp_overlap 4548210 4548207 4548206, overlap 4548208 GCAGAGTGAGCAATA CCCTCTTC AAACA GAAGAGGG TGAATTATCTGTAGG TERM 5978 4548416 - 4548435 + G 73 -9.2 -3.79906 | GTTGCCGCTGATTCA CGCCCTTG AGTC CCAGGGCG TTGTTATCCAGCTGG yjfH 4548294 - 4549025 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 5979 4549042 - 4549079 + F 90 -13.8 -3.42663 | opp_overlap 4549037 4549052, overlap 4549052 GCTGATAGTATTTTT TAAGAAAAAACCATCC ATAATC GGATGGTTTTTTTTTA TCTTTGACTGGTAAT TERM 5980 4549052 - 4549069 + F 100 -7 -6.38655 | opp_overlap 4549052, overlap 4549042 TTTTTTAAGAAAAAA CCATCC ATAATC GGATGG TTTTTTTTTATCTTT TERM 5981 4549069 - 4549052 - f 95 -7.7 -5.4505 | opp_overlap 4549042 4549052 TTTTTTAAGAAAAAA CCATCCA TAAT CGGATGG TTTTTTTTTATCTTT TERM 5982 4549243 - 4549228 - g 71 -4.8 -4.61868 | TATTGATATAGAAAA TAATGA ATCT TCATTA ATAATAAAAATGAAT yjfI 4549157 - 4549561 + | putative cytoplasmic protein TERM 5983 4550332 - 4550353 + GF 83 -7.9 -4.6038 | gap 1, overlap 4550334 TTTGTCCAGACTGAC CTGGCCC-GC TTT GCTGGGCCTG TTTTGCTTTGCTATC TERM 5984 4550334 - 4550351 + GF 77 -9.1 -3.90002 | gap 1, overlap 4550332 TGTCCAGACTGACCT GGCCC-GC TTT GCTGGGCC TGTTTTGCTTTGCTA SC4247 4550233 - 4551336 + | resembles potassium channels TERM 5985 4551381 - 4551370 - gf 74 -7.2 -4.17048 | TGCTCGGTAAAACAA GCGC GCCA GCGC CGATTCGCGGACCAT TERM 5986 4551728 - 4551740 + GF 100 -9.1 -5.03314 | opp_overlap 4551727 4551726 CAACTGGCAAGAACG GCGCT GGC AGCGC TTTTTTAACCATGAA yjfK 4551309 - 4551992 + | putative cytoplasmic protein yjfL 4552010 - 4552408 + | putative inner membrane protein TERM 5987 4552552 - 4552564 + G 90 -4.7 -5.31275 | GACGCTGGCGATTAT GGGCG GAG CGGCC TTTTTTCTCCTGAAA yjfM 4552418 - 4553056 + | putative inner membrane protein TERM 5988 4553958 - 4553968 + F 76 -8.2 -4.1822 | opp_overlap 4553951 4553954 AGGTGAAAGCAGCGT GCGG AAG CCGC TTTATTCACGTGAAG TERM 5989 4554651 - 4554665 + G 72 -3.5 -4.68724 | gap 1, opp_overlap 4554635, overlap 4554650 4554651 GGCGGGAAGTTTTGT CGC-CC GGGC GGCGCG TTTTGTATTACATGC TERM 5990 4555235 - 4555245 + G 70 -6.8 -4.18762 | GGAGTCATGGCTTAA TGCG GCG CGCA TTTTCAGTCGCAATT aidB 4554289 - 4555929 + | isovaleryl CoA dehydrogenase yjfN 4556249 - 4555974 - | hypothetical protein yjfO 4556709 - 4556380 - | hypothetical protein yjfP 4556893 - 4557642 + | esterase yjfQ 4558394 - 4557639 - | transcriptional repressor UlaR TERM 5991 4558226 - 4558241 + g 85 -4.6 -5.22039 | overlap 4558227 GTTGGGTAATGGCCT CTGCGC CGTT GCGCAC TTTTTTAAGTTTCCC TERM 5992 4558471 - 4558488 + r 78 -12.7 -2.63596 | opp_overlap 4558471 AGTAAATGGAAAAAA TGCCGGG TAAT CCCGGCA TGATATCGACTCACA TERM 5993 4558488 - 4558471 - R 100 -12.7 -5.22943 | opp_overlap 4558471 AGTAAATGGAAAAAA TGCCGGG TAAT CCCGGCA TGATATCGACTCACA yjfR 4559563 - 4558499 - | putative L-ascorbate 6-phosphate lactonase TERM 5994 4559714 - 4559739 + H 74 -5.5 -4.63107 | overlap 4559709 TAATCTTGCCTGGCG TCATGGGGATG TAGC CATCTTTATGA TTTTACTTATTTAAT ulaA 4559925 - 4561322 + | ascorbate-specific PTS system enzyme IIC sgaB 4561338 - 4561643 + | L-ascorbate-specific enzyme IIB component of PTS ptxA 4561653 - 4562117 + | L-ascorbate-specific enzyme IIA component of PTS TERM 5995 4562787 - 4562755 - g 81 -11.9 -3.60627 | opp_overlap 4562753 GCACGGCAGTTCAAA CGCTCCATTGCCCAA CTG TGGGGCTAAGGAGCG GCTATGCTGTCGAAA ulaD 4562131 - 4562781 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 5996 4562850 - 4562830 - g 90 -8.2 -4.7497 | GGCATCTATGAAAAA GCGCTCCC TGCCG GGGAGTGC TGGCTGGAGCGCCTG sgaU 4562791 - 4563645 + | L-xylulose 5-phosphate 3-epimerase sgaE 4563645 - 4564331 + | L-ribulose-5-phosphate 4-epimerase TERM 5997 4564423 - 4564406 - T 100 -12.7 -5.00616 | CTTTCCGCGAAAAAA GCCCCCT GCTC AGGGGGC AAATCAACTATGGCT yjfY 4564735 - 4564460 - | hypothetical protein SC4264 4564929 - 4565135 + | hypothetical protein rpsF 4565206 - 4565601 + | 30S ribosomal protein S6 priB 4565608 - 4565922 + | primosomal replication protein N rpsR 4565927 - 4566154 + | 30S ribosomal protein S18 rplI 4566196 - 4566645 + | 50S ribosomal protein L9 TERM 5998 4566671 - 4566701 + F 100 -9.7 -5.0133 | opp_overlap 4566672 4566677, overlap 4566672 TCGTTTTTGCTAGCA ACGAAACGTCGGC CCAGC GCCGGCGTTTTGC TTTTTTAACCCCATC TERM 5999 4566672 - 4566700 + F 90 -13.2 -3.60316 | opp_overlap 4566672 4566677, overlap 4566671 CGTTTTTGCTAGCAA CGAAACGTCGGC CCAGC GCCGGCGTTTTG CTTTTTTAACCCCAT TERM 6000 4566776 - 4566762 - f 70 -2.2 -4.93365 | CGCGATAATTAAAAA TAAAAC ATT ATTTTA ATTTCTTGGTGAAAG TERM 6001 4566845 - 4566855 + G 70 -3.2 -4.69053 | AAAACGTCGTTTATG TGTG TGC CGCA TTTTGTTGCCTGCTA yifZ 4566793 - 4567719 + | hypothetical protein TERM 6002 4567728 - 4567707 - T 79 -10.2 -3.61398 | TTGGTGGGTGAATAA GGTGAAGC GGTAAT GCTTCACC TGAACGAATAGGGTA ytfB 4568404 - 4567769 - | hypothetical protein TERM 6003 4568568 - 4568595 + H 79 -4 -5.21709 | gap 1, opp_overlap 4568571, overlap 4568571 CAAGTTTTACCAGAA GAAGCGTGGCTGT TAT GCTGCC-CGCTAC TTTTTTGATATCCGA fklB 4568624 - 4569244 + | peptidyl-prolyl cis-trans isomerase TERM 6004 4569253 - 4569293 + F 95 -17 -2.52676 | gap 1, overlap 4569268 TCTCTAAGCGCCCCG GGTTTGCCGGATGATGGCG TAAA CGCC-TTATCCGGCAACCC TGACTTCAGCAGATG TERM 6005 4569569 - 4569558 - g 71 -5.8 -4.22652 | GTAGATCAGGTAAAA GTCG CAGC CGAC GAACAGGCTCCGGCT TERM 6006 4570284 - 4570269 - g 73 -5.4 -4.62904 | gap 1, opp_overlap 4570269 AAAGATCCGGAAAAA TCGCTGC CGC GC-GCGA TTAACTCAATACCGA cycA 4569540 - 4570943 + | D-alanine/D-serine/glycine permease TERM 6007 4572383 - 4572357 - g 71 -10.8 -3.16071 | overlap 4572355 4572353 CCCGATATTAACAGA GTGGACGACGGT ATC ACCAGCGCCCAC TGACGTTATCTCTTT SC4273 4571281 - 4572420 + | hypothetical protein TERM 6008 4572826 - 4572803 - g 73 -6 -4.46581 | GAAAATCGTACAAAA TCCACCGG GTAAGCCG CCAGTGGA TGCAGCGACTTTTCG TERM 6009 4573150 - 4573161 + G 78 -2.2 -5.15167 | gap 1, overlap 4573150 ACACTATTCTACGTA CC-GC CAC GCAGG TTTTTGTTAATGGTG SC4274 4572435 - 4573823 + | hypothetical protein TERM 6010 4573878 - 4573845 - T 73 -9.8 -3.36327 | opp_overlap 4573849, overlap 4573849 TTAGTCGATTCAGAA TAAACGATCCTG TCTATACGTT CAGGATCGTTTA TTGGCGGTGGATTAT TERM 6011 4573874 - 4573849 - T 72 -6.2 -4.33417 | opp_overlap 4573849, overlap 4573845 TCGATTCAGAATAAA CGATCCTG TCTATACGTT CAGGATCG TTTATTGGCGGTGGA ytfE 4574552 - 4573890 - | cell morphogenesis/cell wall metabolism regulator TERM 6012 4574139 - 4574153 + g 74 -8.6 -4.03811 | overlap 4574130 CTGTTTGATCATGGG GAACAG GAT CTGTTC TTCTTTCATCATATG TERM 6013 4574423 - 4574448 + g 79 -11.2 -3.63744 | gap 1, overlap 4574420 CAATATCGACGTCGT GACGCGTGGCG GCGCG CGCCA-GCGTC TGTTTTCCGCCGCAG TERM 6014 4574665 - 4574684 + r 80 -7.1 -4.70879 | opp_overlap 4574658, overlap 4574669 TGAAATTAGCGTTCC GTGACCG GAACGA CGGTCGC TTTTTCCGGTTTCGC ytfF 4575620 - 4574655 - | hypothetical protein TERM 6015 4576409 - 4576437 + H 77 -3.6 -5.09426 | overlap 4576415 TCCGCCTGGCGAACG GCAATCCCGCGC TGACT GAGCGGGGCGGC TTTTTTCGGGTTACG ytfH 4576636 - 4577022 + | hypothetical protein TERM 6016 4577066 - 4577013 - T 100 -19.3 -2.78816 | gap 3 GGACCGTTTATCAGA TGGCGGCTAGCGCTTTATTCGGCCTG CCAGT CAGGCCGAATAAA-CGC-AGC-GCCA TACGGGACTCACGTT cpdB 4579023 - 4577080 - | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein cysQ 4579291 - 4580031 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase ytfJ 4580578 - 4580021 - | hypothetical protein ytfK 4580839 - 4581111 + | hypothetical protein TERM 6017 4581145 - 4581177 + T 77 -9.1 -3.85698 | opp_overlap 4581151, overlap 4581147 4581151 AGGTTAAAAAAGTAA AAAAAACGGCTCCTG AAT CAGGAGCCGTTGATG TTTCTGGCAAACGGA TERM 6018 4581147 - 4581175 + T 86 -11.7 -3.51934 | opp_overlap 4581151, overlap 4581145 4581151 GTTAAAAAAGTAAAA AAAACGGCTCCTG AAT CAGGAGCCGTTGA TGTTTCTGGCAAACG TERM 6019 4581151 - 4581171 + T 100 -16.9 -3.50335 | opp_overlap 4581151, overlap 4581147 4581145 AAAAAGTAAAAAAAA CGGCTCCTG AAT CAGGAGCCG TTGATGTTTCTGGCA TERM 6020 4581171 - 4581151 - T 100 -16.9 -6.11019 | opp_overlap 4581151 4581147 4581145 AAAAAGTAAAAAAAA CGGCTCCTG AAT CAGGAGCCG TTGATGTTTCTGGCA ytfL 4582538 - 4581195 - | hypothetical protein TERM 6021 4581239 - 4581253 + g 70 -3.4 -4.77165 | overlap 4581222 CATCGGGCAGTTTCG GCGCCG GTA CGTTGC TTTTATTGTCGAGAC TERM 6022 4582631 - 4582610 - R 70 -5.1 -4.41895 | opp_overlap 4582610, overlap 4582611 AACGTTTAATGAAAA CCGGCTC GTAGCAGT GAGCCGA TAAGTTCAGGGCTAG msrA 4583359 - 4582721 - | methionine sulfoxide reductase A TERM 6023 4583317 - 4583338 + g 90 -5.9 -5.26316 | opp_overlap 4583319, overlap 4583302 4583308 TGCGTCCTGGTAACG CATCTGCTT GAGT AACCAGATG TTTTTTATCAAATAA TERM 6024 4584091 - 4584102 + G 74 -7.2 -4.20042 | GGAATTGCTCTGGGC CGCC ATCA GGCG TTTTGGGATATTGAT ytfM 4583572 - 4585305 + | hypothetical protein TERM 6025 4585836 - 4585802 - g 77 -4.8 -4.91511 | opp_overlap 4585806 4585807, overlap 4585803 ATGGCAGGAGAAAAA CCTGACCCTGAAACCG ACG CGGCTTCAGGGATTGC TGATCGCGCTGCCGA TERM 6026 4585806 - 4585832 + G 71 -10.8 -3.21416 | opp_overlap 4585803 4585802, overlap 4585807 CAGGAGAAAAACCTG ACCCTGAAACCG ACG CGGCTTCAGGGA TTGCTGATCGCGCTG TERM 6027 4585807 - 4585831 + G 81 -14.3 -2.52635 | opp_overlap 4585803 4585802, overlap 4585806 AGGAGAAAAACCTGA CCCTGAAACCG ACG CGGCTTCAGGG ATTGCTGATCGCGCT ytfN 4585302 - 4589081 + | hypothetical protein ytfP 4589084 - 4589428 + | putative cytoplasmic protein TERM 6028 4589456 - 4589435 - T 71 -10.1 -3.17392 | opp_overlap 4589435 4589437, overlap 4589437 CAGCCCTGAACTGAA CACGCCACC CTCG GGTGGCGTT GTTTTTTACATTCTG TERM 6029 4589435 - 4589457 + T 100 -9.9 -5.1925 | gap 1, opp_overlap 4589435 4589437, overlap 4589437 CAGCCCTGAACTGAA CA-CGCCACC CTCG GGTGGCGTTG TTTTTTACATTCTGG TERM 6030 4589454 - 4589437 - T 81 -12.7 -3.14878 | opp_overlap 4589435 4589437, overlap 4589435 GCCCTGAACTGAACA CGCCACC CTCG GGTGGCG TTGTTTTTTACATTC TERM 6031 4589437 - 4589454 + T 100 -12.7 -4.67173 | opp_overlap 4589437 4589435, overlap 4589435 GCCCTGAACTGAACA CGCCACC CTCG GGTGGCG TTGTTTTTTACATTC gudP 4590690 - 4589482 - | putative pemease TERM 6032 4589624 - 4589603 - G 71 -4.3 -4.56597 | overlap 4589605 GTTGTCCGGTAAAAA TAGCCGACC ATAA GGCCTGCCA ACGTACCGCCGCCGC TERM 6033 4590326 - 4590316 - G 70 -6.8 -4.07568 | TTCTTTGTCTGAAAA CCAG TCG CTGG CGAAGCGGGACTGCT TERM 6034 4590441 - 4590426 - G 85 -6.8 -4.89393 | overlap 4590427 TAAATCCGACAAAAA CGGTCG CAAT CGACCA GATTAGCACCATCAG TERM 6035 4592208 - 4592229 + r 79 -8.7 -4.20025 | opp_overlap 4592208 ATTAGCCAATAAAAA GGCCCTCAT TACT ATGAGAGCC TTTATCTTGACGCTT TERM 6036 4592229 - 4592208 - R 100 -10.9 -5.11063 | opp_overlap 4592208 ATTAGCCAATAAAAA GGCCCTCAT TACT ATGAGAGCC TTTATCTTGACGCTT ppa 4592789 - 4592259 - | inorganic pyrophosphatase TERM 6037 4592986 - 4592951 - R 100 -15.5 -3.23274 | opp_overlap 4592946 4592952, overlap 4592946 TGTCTGATAAGGCAA CGCCGCCATTGGACA TGTTAT TGCCCAATGGCGGCT TCATGCGTTATTCCG TERM 6038 4592952 - 4592985 + r 100 -16.8 -3.25169 | opp_overlap 4592951 4592946, overlap 4592946 GTCTGATAAGGCAAC GCCGCCATTGGACA TGTTAT TGCCCAATGGCGGC TTCATGCGTTATTCC fbp 4594014 - 4593016 - | fructose-1,6-bisphosphatase TERM 6039 4593086 - 4593044 - G 71 -11.3 -2.91593 | overlap 4593043 4593085 TATTCGCGGATAAAG CGTTCCACATCGTCAACCA TATGG CGGTTGCCGACGAAGAACG AGCGGCGCTGGTGCA TERM 6040 4593914 - 4593924 + g 73 -5.4 -4.63218 | TCGCGGTGGATGATC TTGG CGC CCAA TTTTATTGCCGACAG TERM 6041 4594634 - 4594647 + G 71 -5.9 -4.27512 | overlap 4594635 AGGTTTCCGCGCGCC TGGGC GAGA GCCCG TTCTTTGTTATCGAA mpl 4594189 - 4595562 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase yjgA 4596220 - 4595669 - | hypothetical protein pmbA 4596316 - 4597668 + | peptidase PmbA TERM 6042 4597727 - 4597671 - f 86 -11.6 -3.4811 | gap 1, opp_overlap 4597681 CGCCGGACAATAATA CCCGTCATACTTCAGGCTGCAGGC-GC GTTG GCTGCCTGCAACCCGAATTATTCAGGG TATTACACTTATCGT TERM 6043 4597681 - 4597717 + F 86 -11.6 -3.65201 | gap 1, opp_overlap 4597671 TAATACCCGTCATAC TTCAGGCTGCAGGC-GC GTTG GCTGCCTGCAACCCGAA TTATTCAGGGTATTA TERM 6044 4597945 - 4597930 - g 73 -6 -4.45544 | overlap 4597914 4597931 CGGCATTAACCAAAA TGCGCG CGGC CGCGCT GGATGCTCAAAAAGC cybC 4597767 - 4598153 + | cytochrome b(562) TERM 6045 4598155 - 4598204 + F 74 -10.9 -2.79183 | gap 1 AGAAGTATCGTTAAT TTTTGTGGGATGGCGGCTTCGC TTTATCC GC-AGGTCGCCATCCGGCAAAA TGTAATACCCATCAC SC4294 4598157 - 4598312 + | hypothetical protein SC4295 4598450 - 4598779 + | hypothetical protein SC4296 4598790 - 4599152 + | putative cytoplasmic protein TERM 6046 4599223 - 4599191 - g 81 -8.4 -4.3467 | gap 1 ACGGTGAGAGTAAAA GGCAAGGGCG-ACGC CAAA GCACGCGCCTTTGCC GATGCGCTGAACCAT SC4297 4599128 - 4599454 + | hypothetical protein TERM 6047 4599441 - 4599454 + F 72 -3.1 -5.06414 | gap 1 ACAGGGTGGATTTCG TC-GCG AAA CGCTGA TTTTTATTAAAAAGG TERM 6048 4600120 - 4600134 + G 75 -6.4 -4.5394 | opp_overlap 4600120, overlap 4600121 ATGTCACCAAAGTGA TGATGG TCG CCATCG TTTTGCTGTTTGTGT SC4298 4599477 - 4600253 + | putative inner membrane protein TERM 6049 4600442 - 4600465 + G 100 -9.4 -5.27335 | overlap 4600438 ACCGGCGTCTACGGC GCGGTCGCCG CTTT CGGCGCCAGC TTTTTATTTGCCCGC SC4299 4600265 - 4600909 + | putative inner membrane protein TERM 6050 4601371 - 4601398 + G 83 -8.3 -4.4648 | TTGACGCCGATGCGG TCCGGCAGGCG GTAAAA CGCCACCCGGA TTTTATCGTCGGCCT TERM 6051 4601507 - 4601495 - g 76 -5.5 -4.72497 | overlap 4601496 CATGCAGCAAGAAAA CGGCA ACC TGCCA CTGATGGTACATATT dho 4600968 - 4602101 + | dihydroorotase mlr 4602085 - 4603203 + | putative selenocysteine synthase [L-seryl-tRNA(Ser) selenium transferase SC4302 4603200 - 4603940 + | hypothetical protein TERM 6052 4604233 - 4604194 - g 83 -12.8 -3.25088 | gap 1, opp_overlap 4604218, overlap 4604186 4604195 CTGCAAACGCAGCAA TCTCCCGCCCTGGCGCGCG GTC CGCGCACCAGC-CAGGAGC GGATACACTATTTGC TERM 6053 4604232 - 4604195 - g 89 -16.3 -2.54732 | gap 1, opp_overlap 4604218, overlap 4604194 4604186 TGCAAACGCAGCAAT CTCCCGCCCTGGCGCGCG GTC CGCGCACCAGC-CAGGAG CGGATACACTATTTG TERM 6054 4604218 - 4604255 + G 84 -6.1 -5.0538 | opp_overlap 4604195 4604194 4604186 CTGGCGCGCGGTCCG CGCACCAGCCAGGAGCG GATA CACTATTTGCTGGCGCG TTTTTTAACCTCCGC licR 4603996 - 4605846 + | phosphotransferase system mannitol/fructose-specific IIA component TERM 6055 4606118 - 4606100 - g 74 -7.4 -4.1899 | opp_overlap 4606093 GCATGCCAGTGAAAA CCGTCACT CTT AGCGACAG TGAAGATGCATTGAT relB 4605958 - 4606200 + | bifunctional antitoxin/transcriptional repressor RelB relE 4606190 - 4606474 + | putative inner membrane protein nrdG 4606942 - 4606478 - | anaerobic ribonucleotide reductase-activating protein nrdD 4609297 - 4607159 - | anaerobic ribonucleoside triphosphate reductase TERM 6056 4607289 - 4607256 - G 76 -10.1 -3.90744 | opp_overlap 4607261 4607266 4607267, overlap 4607232 GGGCTGCCTAAATAA CCGCACACGCGGCGG GTGA CCGAGACGCGCGCGG CGTCGTGGTTGCCGC SC4308 4609502 - 4609672 + | hypothetical protein treC 4611354 - 4609747 - | trehalose-6-phosphate hydrolase TERM 6057 4611223 - 4611196 - G 87 -8.5 -4.60797 | gap 2 CGGCGAGATATAAAA CGGCGT-GA-GCC AGAT GGCATCTACGCCG AGTCGCTGTAGATAG pttB 4612723 - 4611404 - | trehalose(maltose)-specific PTS system components IIBC TERM 6058 4612264 - 4612278 + g 95 -5.6 -5.40072 | opp_overlap 4612257 4612237 4612264, overlap 4612266 GCACGATACCAAGAA TCGGCG TGC CGCCCA TTTTTTTCACCGCCG TERM 6059 4612690 - 4612705 + g 75 -6.8 -4.39375 | opp_overlap 4612690, overlap 4612688 CGACCAGGTCAATCA GCCGGT CGAT ATCGGC TTGTTTTACTTTGCT treR 4613808 - 4612861 - | trehalose repressor TERM 6060 4613860 - 4613847 - H 76 -5.3 -4.84359 | TGATGGTGATAAAAA GAGTA ACTT TACTC AAGCGAAGGGCAATG TERM 6061 4614045 - 4614074 + H 77 -12.1 -2.87564 | overlap 4614047 GAGAATTTTCCTTTT CCGGTAAGCCTGC CTCT GCTGTCTTACCGG TGTGTAAGACAGTGA TERM 6062 4614123 - 4614155 + H 81 -8.3 -4.38712 | opp_overlap 4614120 4614118, overlap 4614118 4614124 TTTATTTAAACATTG CTCATCGGGCAAGGC TTT GCCGTGCCTGAAGAA TTTTCTGCGCCTGAC TERM 6063 4614124 - 4614154 + H 79 -11.8 -3.22906 | opp_overlap 4614120 4614118, overlap 4614118 4614123 TTATTTAAACATTGC TCATCGGGCAAGGC TTT GCCGTGCCTGAAGA ATTTTCTGCGCCTGA TERM 6064 4616003 - 4616042 + G 89 -13.4 -3.59262 | opp_overlap 4616006, overlap 4616006 TATTGAGGGGTTAAG CGACGACGCGCTGGCGGC GCTG GCCGCCCGTACGACGTTG TTTGCGCGTCTGACG TERM 6065 4616006 - 4616039 + G 85 -11.5 -3.93256 | opp_overlap 4616006, overlap 4616003 TGAGGGGTTAAGCGA CGACGCGCTGGCGGC GCTG GCCGCCCGTACGACG TTGTTTGCGCGTCTG mgtA 4614192 - 4616900 + | magnesium-transporting ATPase MgtA yjgF 4617372 - 4616986 - | hypothetical protein pyrI 4617910 - 4617449 - | aspartate carbamoyltransferase regulatory subunit pyrB 4618858 - 4617923 - | aspartate carbamoyltransferase catalytic subunit TERM 6066 4617982 - 4618017 + g 73 -6 -4.38712 | overlap 4617967 GGCGAGCGAAAATAC CGTTGCCCGCCTGTTG GAAG TACCAGGCGTGTGGCG TTTTATCCACATCCG TERM 6067 4618906 - 4618889 - H 100 -12.7 -5.75342 | opp_overlap 4618879 4618889 CCTGGGCAAAAAAAA GCCCCTC AATT GAGGGGC TTGGTATTGGTTTTC TERM 6068 4618889 - 4618906 + H 85 -12.7 -3.4594 | opp_overlap 4618889, overlap 4618879 CCTGGGCAAAAAAAA GCCCCTC AATT GAGGGGC TTGGTATTGGTTTTC yjgG 4618975 - 4619115 + | putative cytoplasmic protein agrR 4619573 - 4619085 - | putative arginine repressor TERM 6069 4619702 - 4619756 + r 79 -12.2 -2.76263 | gap 1, opp_overlap 4619739, overlap 4619700 AAAAGGTGACGACGT GCCTGATGGCGCTGTG-CTTATCAG TCCTGT CGGATAAGACGCGTCGCCATCTGGC TCGTTACATCATCGC yfcC 4621163 - 4619760 - | hypothetical protein TERM 6070 4621049 - 4621063 + g 70 -7.1 -4.07678 | CCTCTTTTCCCAGCG TGGCG TTCAT CGCCA TTTGGTATTTTCCCG TERM 6071 4621179 - 4621218 + r 81 -12.3 -3.14211 | gap 1, opp_overlap 4621184 GATGTTCTCTCCTGA TATCAC-GGATATGCGCC GCGAG GGCGCATATCCTGTGGGA TTAGTCGCCGAGCGT TERM 6072 4621212 - 4621184 - R 81 -13.2 -2.62184 | opp_overlap 4621179 TCTCTCCTGATATCA CGGATATGCGCC GCGAG GGCGCATATCCT GTGGGATTAGTCGCC otcC 4622223 - 4621219 - | ornithine carbamoyltransferase TERM 6073 4622319 - 4622307 - R 79 -10.5 -3.63515 | CTGTAGGCCGAATAA GGCGG AAG CCGCC ATCCGGTAAAAAGCC arcC 4623267 - 4622335 - | carbamate kinase TERM 6074 4623060 - 4623073 + g 74 -6.7 -4.36914 | GGTAGGGCGTAACGT TAGCG TAGG CGCTA TTTTGTAGCGCCAGC adi 4624501 - 4623278 - | arginine deiminase SC4322 4624599 - 4624790 + | hypothetical protein TERM 6075 4625159 - 4625145 - f 82 -5.8 -5.24799 | GTATAAAGAGAAAAA TAAAAC GCT GTTTTA ACTAAGGGGATGCGA TERM 6076 4625523 - 4625505 - g 70 -5.2 -4.46212 | opp_overlap 4625507 4625518, overlap 4625507 GCGTCGACGAGAAAA CCGTCGTC CTG AACGAAGG CGACTTTGTGGTGTT yjgK 4625174 - 4625626 + | putative cytoplasmic protein argI 4626704 - 4625700 - | ornithine carbamoyltransferase subunit I yjgD 4626870 - 4627286 + | hypothetical protein TERM 6077 4627305 - 4627326 + G 100 -10.9 -5.41746 | opp_overlap 4627299, overlap 4627300 TGCATAGTATGACGG TACGGCAGC GTCT GCTGTCGTA TTTTTTTAACAGGTT TERM 6078 4627649 - 4627673 + G 71 -10.7 -3.30771 | opp_overlap 4627650, overlap 4627636 4627650 AGCGCCATGCCGCAA ACTGATGACCC CTG GGGTCGTCAGC TTATCGACCGTATGG TERM 6079 4627650 - 4627672 + G 81 -14.2 -2.58249 | opp_overlap 4627650, overlap 4627649 4627636 GCGCCATGCCGCAAA CTGATGACCC CTG GGGTCGTCAG CTTATCGACCGTATG TERM 6080 4627672 - 4627650 - g 81 -12 -3.55444 | opp_overlap 4627650 4627649 4627636 GCGCCATGCCGCAAA CTGATGACCC CTG GGGTCGTCAG CTTATCGACCGTATG miaE 4627298 - 4628110 + | hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA SC4327 4628265 - 4628143 - | hypothetical protein TERM 6081 4628252 - 4628235 - G 86 -12.7 -3.72576 | TCTGTCCTGAGTAAA GCCTGCC CTGC GGCAGGC AAAAAGAACTCATTC ytgA 4628832 - 4628344 - | putative inner membrane protein TERM 6082 4628860 - 4628885 + r 82 -11.3 -3.49618 | gap 1, opp_overlap 4628855 4628852 TGAATAATAAGTGAT TCCCGGATAACA GGA TGTT-TCCGGGA TTACTTATATCAGCA yjgM 4629454 - 4628939 - | putative acetyltransferase TERM 6083 4629218 - 4629206 - G 74 -10.5 -3.46602 | TTCGCTACAGGATAA CGGCG CCA CGCCG CCGCCGCCCACCACA TERM 6084 4629574 - 4629591 + H 84 -4.9 -5.3321 | opp_overlap 4629574 4629575 4629577, overlap 4629575 AGTATCGTAGTCAAA TCAGTAA CAAT TTACTGG TTTTTATTATTAATT yjgN 4629637 - 4630824 + | putative inner membrane protein TERM 6085 4630852 - 4630833 - T 100 -15 -4.66609 | opp_overlap 4630831 TATCTGATGTAAAAA GGCCGACG TTTA CGTCGGCC CATAATTCATGTTGT valS 4633821 - 4630966 - | valyl-tRNA synthetase TERM 6086 4631221 - 4631238 + g 71 -7.7 -3.9712 | gap 1 GCCGTCGATGATTTT GGTCACGG AAA CCG-GACC TTTGTCATCGGCTGG TERM 6087 4632326 - 4632346 + g 74 -7.5 -4.07568 | opp_overlap 4632306, overlap 4632328 ACGCTGGTCGGGTGG AACTGACGC AGC GCGTCGGTG TTTTCCGGCCAGCCG TERM 6088 4632328 - 4632344 + g 74 -10.1 -3.63744 | opp_overlap 4632306, overlap 4632326 GCTGGTCGGGTGGAA CTGACGC AGC GCGTCGG TGTTTTCCGGCCAGC TERM 6089 4633590 - 4633606 + g 71 -4.3 -4.62783 | overlap 4633593 CAGCGTGGTCGGTGC CGACCTG CCA CAGGGTG TTTTTACCCTGCATA holC 4634264 - 4633821 - | DNA polymerase III subunit chi TERM 6090 4634319 - 4634373 + r 73 -10 -3.30124 | gap 2, opp_overlap 4634328 4634329 4634349 4634350 TGATGCCTCCCGTAG GCCGGATAAGCGCAGCGCCATCCGGC AAAAC GCCTGATGGCG--GCGCTAATGCGCC TTATCAGGCCTACGG TERM 6091 4634364 - 4634328 - R 82 -11.6 -3.30124 | gap 2, opp_overlap 4634319, overlap 4634329 4634349 4634350 CCGTAGGCCGGATAA GCGCAGCGCCATCCGGCA AAA CGCCTGATGGCG--GCGC TAATGCGCCTTATCA TERM 6092 4634365 - 4634329 - R 70 -10.7 -2.57931 | opp_overlap 4634319, overlap 4634328 4634349 4634350 CGTAGGCCGGATAAG CGCAGCGCCATCCGGCA AAA CGCCTGATGGCGGCGCT AATGCGCCTTATCAG TERM 6093 4634360 - 4634349 - R 71 -7.2 -4.09685 | opp_overlap 4634319, overlap 4634328 4634329 4634350 CGCCATCCGGCAAAA CGCC TGAT GGCG GCGCTAATGCGCCTT pepA 4635913 - 4634402 - | leucyl aminopeptidase SC4334 4636076 - 4635957 - | hypothetical protein yjgP 4636308 - 4637408 + | putative permease TERM 6094 4637584 - 4637531 - g 95 -8.2 -5.06451 | gap 3, opp_overlap 4637549 GATCAGCTGAAAAAA GCGGGGCAGGGTA-AC-TACGACGCGC TGG GCGCGG-GTATGTACACCCTGCTCAGC GTACCTAAGGATATC TERM 6095 4638425 - 4638447 + G 81 -8.4 -4.29227 | ATTCCGCCGATTGTC GGCGCGCT GCTGCCG AGCGCGTC TTTCTTCCTGATTAG yjgQ 4637408 - 4638490 + | putative permease TERM 6096 4638544 - 4638521 - T 100 -13.8 -3.794 | opp_overlap 4638521 4638541, overlap 4638496 4638494 CGGCAATGCAGTAAA GCGCAGTGCC TGAT GGCGCTGCGC TTATCAGGCCTACCA TERM 6097 4638521 - 4638544 + T 100 -16 -3.30124 | opp_overlap 4638496 4638494 4638521, overlap 4638541 CGGCAATGCAGTAAA GCGCAGTGCC TGAT GGCGCTGCGC TTATCAGGCCTACCA TERM 6098 4638541 - 4638582 + T 93 -13.9 -3.53444 | opp_overlap 4638521, overlap 4638521 4638544 GTGCCTGATGGCGCT GCGCTTATCAGGCCTAC CATGACCC GTAGGCCTGATAAGTCC TTTCCGCCGCCATCC TERM 6099 4638544 - 4638579 + T 100 -16.4 -2.90496 | overlap 4638541 CCTGATGGCGCTGCG CTTATCAGGCCTAC CATGACCC GTAGGCCTGATAAG TCCTTTCCGCCGCCA TERM 6100 4638729 - 4638706 - T 73 -2.5 -5.2422 | opp_overlap 4638706 AAGTAGATCAAAAAA TTTATAACG TGCTGC CGTGATAAA TCTGATAACCCAAAT idnR 4639705 - 4638707 - | L-idonate regulator TERM 6101 4639161 - 4639171 + g 71 -8.2 -3.87075 | AGATAGAGAATTTTC CGCC GCT GGCG TTTATCCAGCATGGT TERM 6102 4639592 - 4639612 + g 80 -4.6 -5.00616 | overlap 4639593 GATCTGCGCAATACG CTCGCCGG TTTCC CTGGCGAC TTTTTTCGGCGAGCG TERM 6103 4639632 - 4639647 + g 74 -3.2 -4.83615 | overlap 4639619 TTCGGCGAGCGGATG TAACGG CTCA CCGTCA TTTTTGTCACGCCTG idnT 4641202 - 4639769 - | GntP family, L-idonate transport protein TERM 6104 4639970 - 4639958 - GR 74 -10.5 -3.23216 | opp_overlap 4639958 4639954 4639969 CGCCAGTACCATTAA CGCCG GAT CGGCG TGGGTTACGTTAATA TERM 6105 4639958 - 4639970 + gr 70 -10.5 -2.57489 | opp_overlap 4639958, overlap 4639954 4639969 CGCCAGTACCATTAA CGCCG GAT CGGCG TGGGTTACGTTAATA TERM 6106 4641134 - 4641117 - GR 93 -12.7 -3.6581 | opp_overlap 4641116 4641125, overlap 4641115 ATTAGCGCCAAAATA GCAGCGC TTAC GCGCTGC GTCGTATTTCCCTGG idnO 4641914 - 4641150 - | gluconate 5-dehydrogenase TERM 6107 4641622 - 4641636 + gr 79 -9.2 -4.06419 | overlap 4641627 GTAAACGGATGACGG CGCTGG ATA CCGGCG TTATTTATCAGGACG TERM 6108 4641627 - 4641668 + gr 76 -5.2 -4.72846 | overlap 4641622 CGGATGACGGCGCTG GATACCGGCGTTATTTAT CAGGAC GTCAATGGCGCCGATATC TTTTTCGATATGTCC idnD 4642970 - 4641939 - | L-idonate 5-dehydrogenase idnK 4643187 - 4643717 + | D-gluconate kinase yjgB 4644764 - 4643745 - | putative alcohol dehydrogenase TERM 6109 4644719 - 4644748 + g 79 -2.8 -5.22006 | gap 1, overlap 4644722 ATTCATAGAGTTCGA GCT-CGCCGCC CGCCTCTTT GGCGGCATAGC TTTTTATTATCGTCA TERM 6110 4646527 - 4646556 + H 100 -8.8 -5.95539 | gap 1, opp_overlap 4646527 TTTTTATAAATATAA TGGCGTATTCAAT AACCA ATTGAA-ACGCCA TTTTTTTATTTGCGA TERM 6111 4646556 - 4646527 - H 77 -8.8 -3.89695 | gap 1, opp_overlap 4646527 TTTTTATAAATATAA TGGCGTATTCAAT AACCA ATTGAA-ACGCCA TTTTTTTATTTGCGA TERM 6112 4646825 - 4646836 + G 74 -4.4 -4.77165 | CTATATGCAGATATT GGAT GGTG ATCC TTTTCTTATCAAAGA SC4343 4646619 - 4647488 + | hypothetical protein SC4344 4648534 - 4648704 + | hypothetical protein SC4345 4649364 - 4648993 - | replication protein TERM 6113 4649597 - 4649609 + H 72 -2.7 -5.00895 | overlap 4649588 4649582 TCATAGTTGCATACT GTAAT ATG ATTGC TTTTTATCTGGTAAA SC4346 4649947 - 4650324 + | hypothetical protein TERM 6114 4650329 - 4650313 - T 79 -2.3 -5.52347 | AATAAAAGGAAAAAA TATGGTT TAT AACAATA TAAAAACTTCCGTGA SC4347 4651313 - 4650642 - | hypothetical protein SC4348 4651851 - 4651600 - | hypothetical protein SC4349 4652868 - 4652038 - | hypothetical protein TERM 6115 4653400 - 4653451 + r 71 -8 -3.91716 | gap 1, opp_overlap 4653401, overlap 4653401 TGTAAGGCGAAAAAA ACAAGGGAGAACTCGAAGAAGCAGC GTA GC-GCTTCGTAGAGTTAGCCCTTGC TTGTTTACAAAATAA TERM 6116 4653450 - 4653401 - R 100 -11.5 -5.47399 | gap 1, opp_overlap 4653400 4653401 GTAAGGCGAAAAAAA CAAGGGAGAACTCGAAGAAGCAGC GTA GC-GCTTCGTAGAGTTAGCCCTTG CTTGTTTACAAAATA TERM 6117 4653401 - 4653450 + r 75 -11.5 -2.94708 | gap 1, opp_overlap 4653401, overlap 4653400 GTAAGGCGAAAAAAA CAAGGGAGAACTCGAAGAAGCAGC GTA GC-GCTTCGTAGAGTTAGCCCTTG CTTGTTTACAAAATA SC4350 4654170 - 4653805 - | hypothetical protein TERM 6118 4655458 - 4655448 - g 75 -4 -4.98436 | TCAACATTAGAAAAA TTAG ATG CTAA AGTTAAACTGCTTTG mta 4654491 - 4655762 + | hypothetical protein TERM 6119 4656307 - 4656322 + G 83 -6.2 -4.85918 | opp_overlap 4656299 4656307, overlap 4656320 GATGAAAGAGCACAA TTCGAA ATGC TTCGAA TTTTATTCTATGATG SC4352 4655773 - 4657860 + | hypothetical protein TERM 6120 4658227 - 4658239 + F 76 -4.1 -5.07107 | AGAAAACTATTCTTT CTTTC TGC GAGAG TTTTTTGGAGCTTTA TERM 6121 4659383 - 4659407 + G 70 -8.7 -3.73212 | overlap 4659380 AGCAAGAGACTATGC TTTAGATATGG ATG CCAAATCTAAA TATCTTTTTTCATTT SC4353 4658481 - 4659503 + | hypothetical protein TERM 6122 4659647 - 4659608 - f 95 -11.7 -3.9009 | opp_overlap 4659609, overlap 4659609 4659611 4659617 AAGGTATGTTAGAAA GTAGAACAAGCTTTACA TCCCAT TGTAAAGCCTGTTCTAT TTTACTATCATATGT TERM 6123 4659609 - 4659646 + F 100 -13 -4.38171 | opp_overlap 4659608 4659609 4659611 4659617 AGGTATGTTAGAAAG TAGAACAAGCTTTACA TCCCAT TGTAAAGCCTGTTCTA TTTTACTATCATATG TERM 6124 4659646 - 4659609 - f 93 -15.2 -2.93572 | opp_overlap 4659609, overlap 4659608 4659611 4659617 AGGTATGTTAGAAAG TAGAACAAGCTTTACA TCCCAT TGTAAAGCCTGTTCTA TTTTACTATCATATG TERM 6125 4659644 - 4659611 - f 82 -13.4 -3.01918 | opp_overlap 4659609, overlap 4659609 4659608 4659617 GTATGTTAGAAAGTA GAACAAGCTTTACA TCCCAT TGTAAAGCCTGTTC TATTTTACTATCATA TERM 6126 4659638 - 4659617 - f 71 -7.4 -3.94823 | opp_overlap 4659609, overlap 4659611 4659609 4659608 TAGAAAGTAGAACAA GCTTTACA TCCCAT TGTAAAGC CTGTTCTATTTTACT TERM 6127 4659957 - 4659972 + F 79 -3.2 -5.4251 | opp_overlap 4659959 AGGAGCATGTAAATG GACCTC AACT GAGATC TTTTTTATGTCTAAA TERM 6128 4660140 - 4660109 - f 70 -10.3 -2.52795 | opp_overlap 4660101 4660113 4660115, overlap 4660113 4660115 AATGTCTTGAATGTA CATATAGTTGCGA GCATCA TCGCAACTATGTG CTCATGAATTCTTCA TERM 6129 4660136 - 4660113 - f 70 -9.7 -2.94912 | opp_overlap 4660113 4660101 4660115, overlap 4660109 4660115 TCTTGAATGTACATA TAGTTGCGA GCATCA TCGCAACTA TGTGCTCATGAATTC SC4354 4660161 - 4661036 + | hypothetical protein TERM 6130 4661234 - 4661218 - T 73 -10.9 -2.55074 | overlap 4661221 CGCAAGCGGAATTTA TAAGGCG CGG CGCCTTA AAGAGCACAGGGAGA TERM 6131 4661468 - 4661510 + T 90 -15.3 -2.74514 | opp_overlap 4661472 4661477 4661481, overlap 4661472 4661477 4661481 TTTATAACAGCTTTA TAAATTAAACAAATCTGCC ATAGA GACAGATTTGTTTAATTTA TAATTAGAGGTTTGC TERM 6132 4661472 - 4661506 + T 95 -11.7 -4.05714 | opp_overlap 4661472 4661477 4661481, overlap 4661468 4661477 4661481 TAACAGCTTTATAAA TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA TTTATAATTAGAGGT TERM 6133 4661506 - 4661472 - T 100 -13.9 -3.89501 | opp_overlap 4661472 4661468 4661477 4661481, overlap 4661477 4661481 TAACAGCTTTATAAA TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA TTTATAATTAGAGGT TERM 6134 4661477 - 4661501 + T 71 -7.2 -4.17789 | opp_overlap 4661472 4661477 4661481, overlap 4661472 4661468 4661481 GCTTTATAAATTAAA CAAATCTGCC ATAGA GACAGATTTG TTTAATTTATAATTA TERM 6135 4661501 - 4661477 - T 79 -9.4 -4.13995 | opp_overlap 4661477 4661472 4661468 4661481, overlap 4661472 4661481 GCTTTATAAATTAAA CAAATCTGCC ATAGA GACAGATTTG TTTAATTTATAATTA yeeN 4662230 - 4661514 - | hypothetical protein TERM 6136 4662265 - 4662286 + r 73 -4.5 -4.87273 | gap 1, opp_overlap 4662250 4662265 4662266, overlap 4662266 4662267 CATTATTTACATTAA TG-GCAGGTT AAT AACCTGCATA TTTTTCTACCGTATT TERM 6137 4662266 - 4662284 + r 73 -7.4 -4.05067 | opp_overlap 4662265 4662266, overlap 4662265 4662267 ATTATTTACATTAAT GGCAGGTT AAT AACCTGCA TATTTTTCTACCGTA TERM 6138 4662267 - 4662283 + r 75 -10.9 -3.02317 | opp_overlap 4662265 4662266, overlap 4662266 4662265 TTATTTACATTAATG GCAGGTT AAT AACCTGC ATATTTTTCTACCGT TERM 6139 4662780 - 4662749 - R 82 -11 -3.59262 | gap 1, opp_overlap 4662747 4662750 4662751, overlap 4662750 TTGCATACTTTTAAA TGGAGGTATACCTCT TGT AG-GGTATACCTCCT GCTTTACGTTATCGC TERM 6140 4662750 - 4662779 + r 88 -14.5 -2.98778 | gap 1, opp_overlap 4662750 4662749, overlap 4662747 4662751 TGCATACTTTTAAAT GGAGGTATACCTCT TGT AG-GGTATACCTCC TGCTTTACGTTATCG TERM 6141 4662779 - 4662750 - R 86 -14.5 -2.75343 | gap 1, opp_overlap 4662747 4662750 4662751, overlap 4662749 TGCATACTTTTAAAT GGAGGTATACCTCT TGT AG-GGTATACCTCC TGCTTTACGTTATCG yjhP 4664420 - 4662789 - | putative SAM-dependent methyltransferase TERM 6142 4663873 - 4663855 - G 71 -10.2 -3.28791 | opp_overlap 4663872, overlap 4663839 4663842 AGGCCGTGCGGACAA CGCTGCCA GCC TGGCTGCG CCATGCCCTGGCGTT SC4357 4664682 - 4664425 - | hypothetical protein SC4358 4665170 - 4665778 + | putative cytoplasmic protein TERM 6143 4666083 - 4666102 + F 82 -2.8 -5.47159 | overlap 4666086 TGAATTAGAGTAATG TGGCGCTA TTCA TAGCGTAA TTTTTTCTGTTGCGG iicA 4666132 - 4667043 + | hypothetical protein TERM 6144 4667097 - 4667127 + F 100 -8.3 -5.55664 | TTATTTAAATTTGTT CAGACGTCGGAAT TTTTT GTTCTGCCGTCTG TTTTTTTAGTGATGA SC4360 4667248 - 4667709 + | hypothetical protein yczH 4668380 - 4667706 - | hypothetical protein uxuR 4668730 - 4669503 + | DNA-binding transcriptional repressor UxuR TERM 6145 4669519 - 4669539 + T 86 -8.9 -4.4773 | opp_overlap 4669518 TTATACCTGGAATAG CGTGGGCAG GCC CAGTCCACG TTTTACTTCCTGTAG trpS2 4670517 - 4669504 - | tryptophanyl-tRNA synthetase II TERM 6146 4670165 - 4670176 + g 74 -2.2 -5.0538 | CGGGTAAAGCCTTTT TGGG CAAT CTCA TTTTTTACCGTAGGA TERM 6147 4670592 - 4670564 - H 79 -10.4 -3.55815 | gap 1, opp_overlap 4670571, overlap 4670545 4670555 4670566 4670568 AAAGACGTCCCGAAA CACAGTAGCCGCC TTTC GGCGGCTACT-TA AAGAGGGATAGTGAT TERM 6148 4670591 - 4670566 - H 86 -13.3 -3.35224 | opp_overlap 4670571, overlap 4670545 4670555 4670564 4670568 AGACGTCCCGAAACA CAGTAGCCGCC TTTC GGCGGCTACTT AAAGAGGGATAGTGA TERM 6149 4670589 - 4670568 - H 100 -15.9 -3.24411 | opp_overlap 4670571, overlap 4670545 4670555 4670566 4670564 ACGTCCCGAAACACA GTAGCCGCC TTTC GGCGGCTAC TTAAAGAGGGATAGT TERM 6150 4670571 - 4670586 + H 76 -11.8 -2.71011 | opp_overlap 4670545 4670555 4670568 4670566 4670564 TCCCGAAACACAGTA GCCGCC TTTC GGCGGC TACTTAAAGAGGGAT SC4364 4670814 - 4670966 + | hypothetical protein TERM 6151 4671661 - 4671635 - f 78 -12.2 -2.53164 | opp_overlap 4671656 4671657, overlap 4671634 4671637 TCACGCATGAGCAAT CATGGCGACGCC GAA GGCAGCGCCACG GAGACTGTGGATTTG TERM 6152 4671659 - 4671637 - f 74 -11.2 -2.80195 | opp_overlap 4671656 4671657, overlap 4671635 4671634 ACGCATGAGCAATCA TGGCGACGCC GAA GGCAGCGCCA CGGAGACTGTGGATT TERM 6153 4672535 - 4672507 - g 81 -8.2 -4.37658 | opp_overlap 4672526, overlap 4672508 AACGTGGCGATAAAA CTGCGGC-GCAAGC GCT GCT-GCTGCCGCAA ATCGATAGCCTTATT pnl 4672005 - 4672739 + | putative aspartate racemase yjiE 4673653 - 4672745 - | putative DNA-binding transcriptional regulator TERM 6154 4673663 - 4673717 + r 70 -9.3 -3.34787 | gap 2, overlap 4673664 4673673 ATCCATTTACTGTTA TC--CTGTCAGCCGCCCGAAGGGGCAT TCT ACGTCCATTCGGGCGGCTGACAACCGC TTATCCCGTCCTCTT TERM 6155 4673664 - 4673716 + r 78 -12.8 -2.6039 | gap 2, overlap 4673663 4673673 TCCATTTACTGTTAT C--CTGTCAGCCGCCCGAAGGGGCAT TCT ACGTCCATTCGGGCGGCTGACAACCG CTTATCCCGTCCTCT iadA 4674944 - 4673772 - | isoaspartyl dipeptidase TERM 6156 4674399 - 4674350 - G 70 -3.3 -4.8048 | gap 1, opp_overlap 4674359 4674367 4674368 TGCCCATATGAAAAA CGCTGACAC-CGGGTTTGCCGCCC AGC AGGCCGCCAACGCGTGATTCGGCG GCCATGCTGGCGAGT yjiG 4675418 - 4674957 - | hypothetical protein yjiH 4676086 - 4675415 - | hypothetical protein TERM 6157 4676734 - 4676702 - R 74 -10.6 -3.14344 | gap 2 GACTGGGGTGAGCAA CGGCCCGT-CA-GGGC GAG GCCCATGGATGGGCCG AGTAATCCCGTAGCC TERM 6158 4676801 - 4676845 + r 79 -10.3 -3.60627 | opp_overlap 4676806 4676815, overlap 4676815 AATAATAGGCAGATT GATAACACTAAAAACCATA GAATAAG TATGGTTTTTAGTGGCATC TTTACCGTGAAATAA TERM 6159 4676840 - 4676806 - R 86 -13.2 -3.39803 | opp_overlap 4676801 4676815, overlap 4676815 TAGGCAGATTGATAA CACTAAAAACCATA GAATAAG TATGGTTTTTAGTG GCATCTTTACCGTGA yjiJ 4678142 - 4676958 - | hypothetical protein TERM 6160 4677038 - 4677024 - G 77 -3.5 -5.0133 | gap 1, opp_overlap 4677035, overlap 4677026 4677027 CAGCGCGGCAAAAAA GAGCGC CGCG GCGC-C GCAAAGCGTGGCGTT TERM 6161 4677037 - 4677026 - G 74 -7.2 -4.13561 | opp_overlap 4677035, overlap 4677024 4677027 GCGCGGCAAAAAAGA GCGC CGCG GCGC CGCAAAGCGTGGCGT yjiN 4679633 - 4678362 - | hypothetical protein TERM 6162 4679687 - 4679716 + r 79 -10.8 -3.5891 | opp_overlap 4679678 4679682 4679685, overlap 4679686 AAACATCAGATTATC CTGTGCCGGATA AGCCTC TATCCGGCAGAG TGTTTACTTCTCAGC yjiO 4680961 - 4679720 - | MFS family transporter TERM 6163 4681462 - 4681478 + G 83 -12.3 -3.61889 | opp_overlap 4681464 AATCGACGACCTCAA CACCGCA TGA TGCGGTG TTTAAAACCTTTTTG yfcI 4681440 - 4682270 + | hypothetical protein yis2 4682950 - 4682267 - | putative integrase protein TERM 6164 4682299 - 4682335 + g 100 -16.1 -3.54741 | opp_overlap 4682306, overlap 4682301 4682306 TGACAGTTTTTTGTC TGTAAAACGCCTGATGA ACA TCATCGGGCGTTTTGTA TTTCAGGGCCTGGTG TERM 6165 4682301 - 4682333 + g 100 -16.5 -3.35046 | opp_overlap 4682306, overlap 4682299 4682306 ACAGTTTTTTGTCTG TAAAACGCCTGATGA ACA TCATCGGGCGTTTTG TATTTCAGGGCCTGG TERM 6166 4682306 - 4682328 + g 100 -14.2 -4.78848 | opp_overlap 4682306, overlap 4682301 4682299 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG TERM 6167 4682328 - 4682306 - G 91 -12 -4.07568 | opp_overlap 4682306 4682301 4682299 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG SC4375 4683522 - 4683121 - | putative cytoplasmic protein TERM 6168 4683746 - 4683770 + rH 75 -11.3 -3.04589 | overlap 4683740 GTCTGAATGTTGCAG GCACGGTGCCC GCT GGGCAACGCGC TCTATAATTATCGTT TERM 6169 4685111 - 4685134 + rH 73 -7.4 -4.05033 | gap 1, overlap 4685113 GTGCTAAACGCATGG CC-TCCCGGAT TGA AACCGGGATGG TTTATATCAACTGGC SC4376 4685510 - 4685367 - | putative cytoplasmic protein TERM 6170 4685395 - 4685407 + gH 77 -4.8 -4.84761 | TTATTTATCCACGTT GCAC TAACC GTGC TTTTTATCCCGATAT yjiS 4685477 - 4685641 + | putative cytoplasmic protein SC4378 4686417 - 4685716 - | putative inner membrane protein TERM 6171 4686452 - 4686480 + r 100 -12.5 -4.51799 | opp_overlap 4686455, overlap 4686455 ATATGAATTATAATT AAAGCTGGCAAGG GTT CTTTGCCAGCTTA TTTTATGCGTTTACT TERM 6172 4686455 - 4686477 + r 100 -14.2 -4.35693 | opp_overlap 4686455, overlap 4686452 TGAATTATAATTAAA GCTGGCAAGG GTT CTTTGCCAGC TTATTTTATGCGTTT TERM 6173 4686477 - 4686455 - R 95 -12 -4.04295 | opp_overlap 4686452 4686455 TGAATTATAATTAAA GCTGGCAAGG GTT CTTTGCCAGC TTATTTTATGCGTTT yjiW 4686823 - 4686491 - | endoribonuclease SymE TERM 6174 4686997 - 4687020 + r 79 -10.4 -3.6053 | opp_overlap 4686997 4687001, overlap 4687001 ATTTGGTGATGAGAA TAAAGCGGCT ATTT AGTCGCTTTA TTGGTTTCTGGGGCA TERM 6175 4687001 - 4687016 + r 77 -6.8 -4.42976 | opp_overlap 4687001 4686997, overlap 4686997 GGTGATGAGAATAAA GCGGCT ATTT AGTCGC TTTATTGGTTTCTGG lysE 4687789 - 4687148 - | amino acid transporter LysE SC4381 4688652 - 4687837 - | hypothetical protein TERM 6176 4688223 - 4688240 + g 71 -8.3 -3.79747 | opp_overlap 4688223 4688224, overlap 4688224 ACAGGTGGATAATAA GCGCCGG AAGT CCGGCGG TTTGCTGCTGAGTAA TERM 6177 4688240 - 4688223 - G 71 -8.3 -3.80174 | opp_overlap 4688223 4688224, overlap 4688224 ACAGGTGGATAATAA GCGCCGG AAGT CCGGCGG TTTGCTGCTGAGTAA TERM 6178 4688224 - 4688239 + g 75 -11.8 -2.87527 | opp_overlap 4688223 4688224, overlap 4688223 CAGGTGGATAATAAG CGCCGG AAGT CCGGCG GTTTGCTGCTGAGTA TERM 6179 4688239 - 4688224 - G 75 -11.8 -2.87622 | opp_overlap 4688224 4688223, overlap 4688223 CAGGTGGATAATAAG CGCCGG AAGT CCGGCG GTTTGCTGCTGAGTA yjiA 4689646 - 4688690 - | putative GTP-binding protein YjiA yjiX 4689860 - 4689657 - | hypothetical protein TERM 6180 4689913 - 4689885 - R 76 -7.5 -4.3255 | gap 2, opp_overlap 4689892 CTGTTAATGAATAAA GCCGGAT--GGCG GCTTG CGCCTTATCCGGC CTACACTAGCCGGGA TERM 6181 4689947 - 4689922 - R 73 -11.1 -2.62263 | gap 1, opp_overlap 4689921 4689919 ATCCGGCCTACACTA GCCGGG-ATCGC TGT GCGCTACCCGGC ATCAGTTTTAGTGGT yjiY 4692105 - 4689955 - | putative carbon starvation protein TERM 6182 4693571 - 4693553 - g 70 -5.2 -4.37886 | overlap 4693554 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATCGACGGTATTGC tsr 4692472 - 4694133 + | methyl-accepting chemotaxis protein I, serine sensor receptor SC4386 4694463 - 4694245 - | hypothetical protein TERM 6183 4694536 - 4694556 + H 74 -6.8 -4.34402 | gap 1 CAGTGAGGTGTTTAC CGC-GCGCT ATCT GGCGCAGCG TTTTAATATGCAGCG TERM 6184 4694926 - 4694949 + H 73 -10.2 -3.02984 | overlap 4694925 ATATGCCATCGCCCA GGCGCTTCTG TCGC CGGATGCGCC ATTTATCAGTTTTAA TERM 6185 4696635 - 4696668 + H 78 -12.5 -2.66272 | overlap 4696614 4696631 CGTACTGGCGATAGT CGGCACGCTGG ACCCGCACATCG CCAGCGTGCCG TGGATTTCGCTCGAC TERM 6186 4697174 - 4697200 + H 71 -10.8 -2.67662 | overlap 4697173 4697193 ACCCGCATCTTTTTT CGGCGCGCCA CTTTTTC TGGCACGCCG CTTGCTCTCTTTTAT SC4387 4697202 - 4697666 + | putative PTS permease ptrB 4697681 - 4698142 + | putative PTS permease TERM 6187 4698664 - 4698683 + G 70 -6.5 -4.16842 | ATATGGTTAAAGGTT TTCTGGA TGCCAT TCCAGAA TTTATTAAACATGGA ptnC 4698168 - 4698947 + | putative PTS permease TERM 6188 4698967 - 4698954 - g 71 -9.5 -3.5241 | opp_overlap 4698964, overlap 4698952 GATTTCTGATAAAGA CCGCC AGCA GGCGG AAACCACTGGTCTGG ptnD 4698925 - 4699773 + | putative PTS permease glmS 4699786 - 4700847 + | putative glucosamine-fructose-6-phosphate aminotransferase TERM 6189 4701235 - 4701221 - g 76 -5.6 -4.77036 | overlap 4701222 CGCTATTACCAAAAA TGCGGA CTC TCCGCT GGCGCAGGCGGCGAC SC4392 4700865 - 4701875 + | putative glucosamine-fructose-6-phosphate aminotransferase mdoB 4704300 - 4702009 - | phosphoglycerol transferase I TERM 6190 4703340 - 4703327 - G 72 -3.8 -4.77986 | overlap 4703317 GTAAACAGCGAAAAA CGCT GGCCTG AGCG GGAAAGCGCTTCAAA TERM 6191 4703531 - 4703545 + g 71 -4.2 -4.61231 | overlap 4703532 CCCTGCACGAAATAG TTCTGG TAG CCGGAG TTTTTCAGAATATCG yjjA 4705044 - 4704583 - | hypothetical protein TERM 6192 4704774 - 4704784 + g 76 -5.4 -4.7416 | CCAACCCCAACTTGT TCAG AAT CTGA TTTTTAACGTTTTCC dnaC 4705839 - 4705102 - | DNA replication protein DnaC dnaT 4706381 - 4705842 - | primosomal protein I TERM 6193 4706358 - 4706336 - G 80 -9.2 -4.10161 | GATGATCGTGTAAAA GGACGTCA ATACCGA TGACGTCC GACGTTAAAATTCTG yjjB 4706947 - 4706474 - | hypothetical protein yjjP 4707882 - 4706938 - | hypothetical protein TERM 6194 4707749 - 4707765 + g 75 -3.6 -4.85782 | GACATTCTATGCGCC GCCACT ATGAC AGAGGC TTTCTTTTTAACACG TERM 6195 4707846 - 4707831 - G 74 -4.6 -4.82901 | TCTTGTTGATAAAAA CGTCAG CCGC CAGACG CAACGCATAAGCTTC SC4399 4708051 - 4707896 - | hypothetical protein TERM 6196 4709015 - 4708998 - H 81 -3.3 -5.41143 | opp_overlap 4709000, overlap 4709000 TAGCGCCCAAAAAAA TAGCGCC ATGC GACGCTT ATCAATACACAGTAA bglJ 4709163 - 4709786 + | DNA-binding transcriptional activator BglJ SC4401 4710295 - 4709837 - | hypothetical protein fhuF 4711234 - 4710446 - | ferric iron reductase involved in ferric hydroximate transport TERM 6197 4710545 - 4710523 - G 75 -11.3 -3.40403 | opp_overlap 4710544 TTCTGCGTACCAGAA GACCGTCGC GCATT ACGACGGTC CGCCACAGCGGGTTA TERM 6198 4710612 - 4710594 - G 90 -4.5 -5.40072 | opp_overlap 4710594, overlap 4710596 4710597 4710598 TGCTTTTCAAAAAAA CAGCGCT GGCGT AGCGTTG CCAGCAGGGCTTCGC yhcK 4712419 - 4711355 - | diguanylate cyclase/phosphodiesterase domain-containing protein yjjZ 4712631 - 4712906 + | hypothetical protein TERM 6199 4713400 - 4713388 - T 70 -9.1 -3.30243 | opp_overlap 4713394 4713395 ACGTAGGTTGGATAA GACGC TTT GCGTC GCCATCCGGCACATG rsmC 4714475 - 4713447 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 6200 4714551 - 4714570 + H 76 -9.2 -3.71378 | GATTTGCTATATTTG CGCCCCTG ATTA CAGGAGCG TTTCGCTATGACATC rimI 4714960 - 4715406 + | ribosomal-protein-alanine N-acetyltransferase yjjG 4715425 - 4716105 + | nucleotidase TERM 6201 4716701 - 4716687 - g 70 -7.1 -4.17425 | opp_overlap 4716687, overlap 4716679 AGAACGAGCTGAAAA TCGGC TGCGC GCCGA TCACCTGGCCGATTG TERM 6202 4717513 - 4717523 + G 81 -8.2 -4.24002 | overlap 4717512 CGATCTGATTGTCGG CGCC GTG GGCG TTTTGCAGTTTGACG prfC 4716197 - 4717786 + | peptide chain release factor 3 TERM 6203 4717797 - 4717816 + F 100 -16.4 -3.33483 | opp_overlap 4717773, overlap 4717792 ACTGATCCCTTTCCG GGCGCGGC ATCC GCCGCGCC TTCGTACTTTCCCTG TERM 6204 4718495 - 4718483 - g 73 -9.1 -3.85698 | overlap 4718455 GCGGCTTTGTAGAAA GCCTG GCG CAGGC TGAAGCCGCCGTGAA osmY 4718188 - 4718805 + | periplasmic protein TERM 6205 4718818 - 4718844 + F 86 -14.5 -2.62184 | gap 1, overlap 4718818 TAATTCGTCGTAATT CGTCCTCCCGAC GTTT GTCGGGAGG-CG TAATGTGCACCACAC SC4410 4718934 - 4719095 + | hypothetical protein TERM 6206 4719144 - 4719126 - f 90 -14.6 -3.1637 | opp_overlap 4719126 ATATATTGCTATCAA GCCAGTCC AGC GGACTGGC TTTTACGGTTTTAGC TERM 6207 4719126 - 4719144 + F 100 -14.6 -4.28049 | opp_overlap 4719126 ATATATTGCTATCAA GCCAGTCC AGC GGACTGGC TTTTACGGTTTTAGC yjjU 4719219 - 4720292 + | hypothetical protein TERM 6208 4720445 - 4720463 + G 74 -8 -3.9712 | overlap 4720439 4720432 CGCGTGCTGGCGCTG GCGGCGCG TTT CCCGTCGC TTTATGCTGCGCTGG yjjV 4720289 - 4721062 + | putative deoxyribonuclease YjjV yjjW 4721958 - 4721095 - | pyruvate formate lyase activating enzyme TERM 6209 4721903 - 4721884 - GT 77 -9.2 -3.9461 | overlap 4721885 GCCCTGTAAGAATAA TGCCAGGC GGCT GCCTGGCC CATCGACGCAGGAAA TERM 6210 4721902 - 4721885 - GT 80 -12.7 -2.96444 | overlap 4721884 CCCTGTAAGAATAAT GCCAGGC GGCT GCCTGGC CCATCGACGCAGGAA yjjI 4723480 - 4721930 - | hypothetical protein TERM 6211 4722176 - 4722166 - GH 71 -6.8 -4.19177 | ACGCGCCAAGACAAA GCTG AAC CAGC GCCTGCGGATTACGC TERM 6212 4723385 - 4723399 + gH 86 -7.1 -5.06816 | GTTTTCAGCTTCCAG CGCCA GAAAA TGGCG TTTTTGTTCAGGCGT TERM 6213 4723771 - 4723755 - g 70 -6.5 -4.20084 | overlap 4723760 ATGACTGATTTAAAA GCAAGCA GCC TGCGTGC GCTCAAACTGATGGA TERM 6214 4724268 - 4724242 - g 71 -5.8 -4.26903 | overlap 4724221 4724267 CGGATTTCATCAAAA CCTCTACCGGTA AAG TGCCGGTAAACG CTACGCCGGAAAGCG deoC 4723722 - 4724519 + | deoxyribose-phosphate aldolase TERM 6215 4724689 - 4724675 - g 71 -4.2 -4.60889 | opp_overlap 4724674 AATTATTCGTAAAAA GCGTGA TGG TCATGC GTTGAGTGACGAAGA TERM 6216 4724699 - 4724710 + G 71 -4.4 -4.57482 | opp_overlap 4724703, overlap 4724703 TCATGCGTTGAGTGA CGAA GAAA TTCG TTTCTTTATCAATGG deoA 4724643 - 4725965 + | thymidine phosphorylase TERM 6217 4726252 - 4726231 - g 77 -8 -4.11216 | GCTCTACCGGTAAAA TTGCCGCC GGCATG GACGGCAA CGCGGACGTTATTGG TERM 6218 4726412 - 4726382 - g 77 -7.7 -4.3129 | gap 2, overlap 4726409 CAGCGACCACGAAAA CAGCTT-CCC-GCAG GAA CTGCTGGATAAGCTG GTGAAACGCGCCAAC deoB 4726017 - 4727240 + | phosphopentomutase deoD 4727450 - 4728169 + | purine nucleoside phosphorylase TERM 6219 4728216 - 4728178 - f 77 -9 -3.85704 | gap 1, overlap 4728179 4728182 GGAGTAAGCAGCAAA TCGACCCGGACCAGG TGCGTCAAGG CCTGGTCCGGGT-AA TGCCAGCGTTATATC TERM 6220 4728216 - 4728179 - f 72 -10.6 -2.90941 | overlap 4728178 4728182 GAGTAAGCAGCAAAT CGACCCGGACCAGG TGCGTCAAGG CCTGGTCCGGGTAA TGCCAGCGTTATATC TERM 6221 4728213 - 4728182 - f 86 -14.5 -2.69489 | overlap 4728178 4728179 TAAGCAGCAAATCGA CCCGGACCAGG TGCGTCAAGG CCTGGTCCGGG TAATGCCAGCGTTAT TERM 6222 4729629 - 4729590 - g 76 -9.3 -3.96148 | gap 2, opp_overlap 4729571, overlap 4729591 4729594 GTCGCTGATGATAAA CGCATCAGCGCGGGCTTTC AGGA GATTGCCCGCGC-GATG-G TGGGAAAATTGAAGT yjjJ 4728366 - 4729676 + | hypothetical protein lplA 4730697 - 4729681 - | lipoate-protein ligase A TERM 6223 4730304 - 4730315 + g 83 -7.2 -4.56775 | CGGAGACTTTGCGAT CGCC GTCC GGCG TTTTTACGACCAGAT smp 4731375 - 4730731 - | hypothetical protein smp 4731343 - 4731492 + | phosphoserine phosphatase serB 4731492 - 4732460 + | phosphoserine phosphatase radA 4732544 - 4733926 + | DNA repair protein RadA TERM 6224 4734955 - 4734936 - g 70 -5 -4.4891 | gap 1, opp_overlap 4734936, overlap 4734938 CCGACTACGATAAAA TCGCGC-TG GGT CATGCGCAA TATATTGATTTCGCA nadR 4734077 - 4735309 + | nicotinamide-nucleotide adenylyltransferase TERM 6225 4735350 - 4735318 - T 76 -12 -2.74443 | opp_overlap 4735327, overlap 4735317 4735313 GGGATAAGAACCAAT GCCTGATGCGACGC TTACC GCGTCTTATCAGGC CTACAGTTTCACAAC TERM 6226 4735381 - 4735425 + T 72 -5.6 -4.42806 | gap 1, overlap 4735382 GTACTGGAATCGCTG GGTTTGTAGGCCGGGTAAGCG CAAG CGCC-ACCCGGCATTCAGACA TTTATTTGGCAATAC yjjK 4737094 - 4735427 - | putative ABC transporter ATP-binding protein TERM 6227 4736604 - 4736567 - G 91 -14.1 -3.14132 | gap 1, opp_overlap 4736579 4736580 4736581, overlap 4736569 TGGCTTTTCTAGCAA CAGACGGCACAGCGCCAC GCG GCGGCGCT-CGCCGCCGG ACAGTTTTTCGACTT TERM 6228 4736602 - 4736569 - G 91 -15.3 -3.13403 | gap 1, opp_overlap 4736579 4736580 4736581, overlap 4736567 GCTTTTCTAGCAACA GACGGCACAGCGCCAC GCG GCGGCGCT-CGCCGCC GGACAGTTTTTCGAC TERM 6229 4737957 - 4737940 - g 71 -7.7 -3.92324 | opp_overlap 4737943, overlap 4737941 CGGCGGAATATCAAA CGATCGC CTCA GCGATCA TTACCCTGGCTAATG TERM 6230 4738147 - 4738135 - g 84 -9.1 -4.29227 | opp_overlap 4738140, overlap 4738139 TTAATGAGGAACAAA CGCAG GCG CTGCG CGATATCGTTGCCTG slt 4737303 - 4739240 + | lytic murein transglycosylase TERM 6231 4739381 - 4739407 + G 100 -13.8 -4.1711 | GGAGTTACTCCGTCA GGCATATGCAGA GGA TCTGCATCTGCC TTTATTACAACTGAT trpR 4739298 - 4739624 + | Trp operon repressor TERM 6232 4739672 - 4739645 - T 70 -9 -3.30124 | opp_overlap 4739646 TCGTAGGCCGGATAA GGCGAAGCGGCC ATCC GGCAACATCGCC GCGAAATGCCTGATG yjjX 4740241 - 4739726 - | NTPase TERM 6233 4740500 - 4740470 - g 73 -6 -4.37886 | TTAGGCCGCACAAAA CGCACGGCGGAG ATTATCG CCCAGGCGTGCG GGTGTGATATTACCT gpmB 4740290 - 4740937 + | phosphoglycerate mutase rob 4741803 - 4740934 - | AraC/XylS family transcriptional regulator creA 4742015 - 4742488 + | hypothetical protein TERM 6234 4742695 - 4742735 + G 71 -6.1 -4.2828 | gap 1, overlap 4742693 4742698 CAGCGGCTTTGAGCT GTGTCGGCAGTTGCTGGA ACGCCA TCCTGCG-CTGCCGATTC TTTTCCTGACTGCCC TERM 6235 4742698 - 4742732 + G 81 -8.6 -4.26327 | gap 1, overlap 4742693 4742695 CGGCTTTGAGCTGTG TCGGCAGTTGCTGGA ACGCCA TCCTGCG-CTGCCGA TTCTTTTCCTGACTG creB 4742501 - 4743190 + | DNA-binding response regulator CreB TERM 6236 4743644 - 4743676 + G 72 -12.1 -2.73275 | overlap 4743642 TGATGTACGTAGCCG CGCCGATAATCAG CGATGGA CGGATTATCGGCG TCCTGTCTGTCGGTA TERM 6237 4744142 - 4744118 - g 73 -9.1 -3.85817 | opp_overlap 4744129, overlap 4744104 4744119 AGGCGCTGGTAGAAA CCCTGCTGCGC CAG GCGCGGCTGGA AAACCGACAGGATAT TERM 6238 4744431 - 4744444 + G 77 -8.1 -4.10007 | TGGTATTCCTGATTT TGCGC TGCC GCGCA TTTTCGACCGATTCT creC 4743190 - 4744614 + | sensory histidine kinase CreC TERM 6239 4744849 - 4744817 - g 75 -12.8 -2.62616 | gap 1 CTATTTGTCAGAGTA CCAGCG-GCCCACAA AAGG TTGTCGGCCCGCTGG TGGCGGTTCCGGTGA creD 4744672 - 4746021 + | hypothetical protein sthE 4747164 - 4746079 - | putative major fimbrial subunit TERM 6240 4746123 - 4746143 + g 70 -5.3 -4.46212 | overlap 4746115 4746125 TGGCATTCGCTTGCC CGGCCGTTA CCG TGGCGGCGG TTTTATAGTAGCGCG TERM 6241 4746300 - 4746290 - G 83 -8.2 -4.41348 | overlap 4746291 4746292 CTGTCGGTAAAGAAA CCGG CGT CCGG CGCCTGAATACCCAA sthD 4747762 - 4747205 - | putative fimbrial subunit sthB 4750317 - 4747780 - | putative fimbrial usher protein TERM 6242 4749137 - 4749149 + g 71 -10.5 -3.30441 | AGCGTACTCTCTATT CCGCC ATA GGCGG TTATGCCGCCTGCTA sthA 4751046 - 4750363 - | putative fimbrial chaparone protein fimF 4751662 - 4751117 - | putative fimbrial chaparone protein TERM 6243 4751731 - 4751715 - R 72 -5.3 -4.56358 | opp_overlap 4751704, overlap 4751700 GATAGCCATATAAAA TAAAATA TTA TATTTTA CTCTGTATGCGCTTC SC4441 4752672 - 4752001 - | putative inner membrane protein TERM 6244 4753029 - 4752985 - R 78 -6.4 -4.70046 | overlap 4752986 4752989 4753015 4753016 GAGAAAAGTACAAAA TGCAGGCGGGCGGCGTTTT-AC TGA GCGAAATCGCCGCCTGCCGG-A GCTCCTCCCGGCGGG TERM 6245 4753026 - 4752989 - R 79 -12.7 -2.83208 | gap 1, overlap 4752985 4752986 4753015 4753016 AAAGTACAAAATGCA GGCGGGCGGCGTTTT-AC TGA GCGAAATCGCCGCCTGCC GGAGCTCCTCCCGGC SC4442 4753371 - 4753057 - | putative periplasmic protein TERM 6246 4753610 - 4753584 - R 100 -13.1 -4.38927 | opp_overlap 4753584 GGGGGACATAAGAAA CAGCCAGTAAG AATAA CTTACCGGCTG TTTTTACGGTTTGGC TERM 6247 4753584 - 4753610 + r 95 -10.9 -4.70879 | opp_overlap 4753584 GGGGGACATAAGAAA CAGCCAGTAAG AATAA CTTACCGGCTG TTTTTACGGTTTGGC arcA 4754354 - 4753638 - | two-component response regulator yjjY 4754450 - 4754590 + | putative inner membrane protein TERM 6248 4755192 - 4755204 + G 74 -7.7 -4.13767 | CCCTTGCCGACGCGC TCCAC GAT GTGGA TTTTACCGTCGCGAC lasT 4754990 - 4755676 + | putative RNA methyltransferase