TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.464368 %AT, 3682023 nt, 35673 terms. Intergenic: 0.535369 %AT, H2T: 584415 nt, 5637 terms; T2T: 160914 nt, 3587 terms; H2H: 228784 nt, 3616 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|56412276|ref|NC_006511.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, complete genome (length 4585229) thrL 190 - 255 + | thr operon leader peptide TERM 1 302 - 280 - f 100 -12.7 -5.51046 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCACC TGAAC AGTGCGGGC TTTTTTTTCGACCAG TERM 2 280 - 302 + F 100 -12 -5.75342 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCAC CTGAACA GTGCGGGC TTTTTTTTCGACCAG TERM 3 1328 - 1351 + G 71 -11 -2.87132 | AAGGGATGATTGGGA TGGCGGCG CGTGTTTT CGCCGCCA TGTCTCGCGCCGGGA TERM 4 1626 - 1646 + G 70 -9.7 -3.36096 | overlap 1623 1619 CAATATCGTGGCGAT CGCTCAGGG ATC TTCTGAGCG TTCCATTTCTGTGGT thrA 337 - 2799 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 2801 - 3730 + | homoserine kinase thrC 3734 - 5020 + | threonine synthase yaaA 5887 - 5114 - | hypothetical protein TERM 5 6789 - 6801 + H 72 -6.2 -4.37092 | TCAGCCATTGCATCA GGCG GGCGA CGCC TTTTATGCCGCGGAT talB 7664 - 8617 + | transaldolase B mogA 8728 - 9318 + | molybdenum cofactor biosynthesis protein yaaH 9941 - 9375 - | hypothetical protein TERM 6 9867 - 9853 - G 82 -5.6 -5.03314 | TCCAGGGCGAAAAAA CCGGCA TTG TGCAGG TTAAGCAGAATGGTG TERM 7 10079 - 10056 - R 72 -8.2 -3.69395 | overlap 10065 10073 TCTATGATCTAATAA GGGGGAAA AGAAAATA TTTCCCCC TGTGAGGGCATTCAC htgA 10804 - 10091 - | hypothetical protein yaaI 11244 - 10840 - | hypothetical protein TERM 8 11899 - 11871 - g 70 -5.2 -4.37886 | gap 1, opp_overlap 11870 11871 11874, overlap 11872 11875 TCATGCCGTACAAAA TCAT-CGGCGCCG ACAA CGGCGACGCATGG CTTGATGTGAAAGGT dnaK 11594 - 13510 + | molecular chaperone DnaK TERM 9 13532 - 13508 - f 83 -2.1 -5.63645 | opp_overlap 13514 13531, overlap 13512 GTAAAAGATAAAAAA TAATCGCCCTT TGA ACGGGTAATTA CTGGCACGGGCGAAG TERM 10 13531 - 13573 + F 80 -12.6 -3.01924 | opp_overlap 13508 13533, overlap 13539 CTTTGAACGGGTAAT TACTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATGCA TGTTAAGGGCAGATA TERM 11 13571 - 13533 - f 90 -15.2 -2.73542 | opp_overlap 13531 13539 TTGAACGGGTAATTA CTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATG CATGTTAAGGGCAGA TERM 12 13539 - 13565 + F 100 -18 -2.9518 | opp_overlap 13533, overlap 13531 GGGTAATTACTGGCA CGGGCGAAGAGG TTT CCTCTCCGCCCG TGTATGCATGTTAAG TERM 13 13677 - 13664 - g 82 -5.2 -4.98531 | GCGTGAAATCAAAAA GGCG TATAAG CGCC TGGCCATGAAATATC dnaJ 13596 - 14723 + | chaperone protein DnaJ TERM 14 14750 - 14773 + F 100 -11 -5.29782 | TTGTATTTTTCTTCA GCCCGGGTGT ATGT ATATCCGGGC TTTTTTCTGCCTGTA SPA0014 15007 - 15954 + | putative regulatory protein SPA0015 16081 - 16425 + | hypothetical protein TERM 15 16444 - 16459 + T 79 -9 -4.16146 | TCATTCGCAGTATCA GGCTCA TCCG TGAGCC TTTTACGCGTCTTTT SPA0016 17019 - 16486 - | hypothetical protein SPA0017 17479 - 17036 - | hypothetical protein TERM 16 17731 - 17742 + H 72 -3 -5.02502 | ACGGTGTTGTTAACC TCAT TTTT ATGA TTTTTATATCATCTA TERM 17 17749 - 17768 + H 74 -5.8 -4.55491 | overlap 17751 TTTTTATGATTTTTA TATCATCT AAAA AGATGATG TTTTGTGATTAGCTA TERM 18 20017 - 20000 - g 91 -14.1 -3.09516 | opp_overlap 20000 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG TERM 19 20000 - 20017 + G 100 -14.1 -4.36914 | opp_overlap 20000 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG SPA0019 19991 - 23047 + | putative hydroxymethyltransferase TERM 20 23086 - 23115 + F 95 -11.6 -4.25104 | CTGGACTATTAGTTT GAGATTCGAAGG CGCGTT CTTTCGAATCTC TTTTCCTGCGCCCCC SPA0020 23328 - 24032 + | hypothetical protein TERM 21 24145 - 24135 - f 80 -5.4 -5.06451 | GATTATTTTAAAAAA GTCA ATA TGAC TAAAGGGGATAGGCC bcfA 24462 - 25004 + | fimbrial subunit TERM 22 24999 - 25017 + F 89 -5.3 -5.69473 | overlap 25013 TTTAGCATGGTTTAT TCCTGAT TCCTT ATCGGGA TTTTTTTCTCGTCTG TERM 23 25081 - 25048 - f 77 -8.8 -3.89346 | TTGGGAGGCGAGAAA GGGGCGTTACGCGC GTCACT GCGCGTAACAAACC GACGGCATCAGGATA TERM 24 25417 - 25428 + G 75 -3.6 -4.87133 | TCATTACCGACCGAT CGCG AAAG CGTG TTTTATTTAAACAGT TERM 25 25556 - 25539 - g 78 -6.9 -4.57073 | overlap 25540 TATCCGCCCGAAAAA TCTGGCG GAGG CGCCAGC CCATGCCCCGGTAAC TERM 26 25555 - 25540 - g 73 -10.4 -3.33922 | overlap 25539 ATCCGCCCGAAAAAT CTGGCG GAGG CGCCAG CCCATGCCCCGGTAA bcfB 25105 - 25791 + | fimbrial chaperone TERM 27 27552 - 27536 - g 87 -8 -4.60292 | TACAACAATAACAAA TCCGCA GGCGA TGCGGA GCGCGATCAAATTTT bcfC 25796 - 28417 + | fimbrial usher bcfD 28418 - 29425 + | fimbrial subunit bcfE 29426 - 29971 + | fimbrial subunit TERM 28 30726 - 30704 - g 95 -8.4 -4.8622 | overlap 30716 GCCTGGAACCAAAAA CGAAGGGAAT ATC ACGCCCTTCG TGGTCACGCCGCCAT bcfG 30498 - 31202 + | fimbrial chaperone TERM 29 31217 - 31236 + F 86 -11.4 -3.68261 | overlap 31229 ACCTATTTTTCAGGC GTCTCCCG ATAG CGGGAGGC TTTCCGATCTTATCG bcfH 31267 - 32112 + | hypothetical protein SPA0029 32151 - 32438 + | hypothetical protein SPA0030 32987 - 32538 - | hypothetical protein TERM 30 33623 - 33613 - g 70 -6.8 -4.09108 | overlap 33614 TTGAATCTATAGAAA GCAC ACT GTGC GATAAAACAGATGCG TERM 31 33988 - 34006 + G 86 -10.4 -4.15044 | opp_overlap 34003 ATATGTTCTCTTCTT TCAATGCT GAT AGCATTGA TTTATTCAAGAGCAG TERM 32 34280 - 34263 - g 79 -2.7 -5.16472 | AAAAATGCCAAAAAA CTGATAT CAAC ATTTCAG TCGACCTTTCTTTTT SPA0031 33357 - 34352 + | LysR family transcriptional regulator SPA0032 34806 - 34369 - | putative transcription regulator TERM 33 34435 - 34465 + g 100 -6.2 -5.54338 | overlap 34436 34437 TAATGCTATATATTT ATTCCCTTCTTTTT TTA AAGAAGAGGGGAGG TTTTTGTTTTCATTG TERM 34 34436 - 34464 + g 76 -9.7 -3.90163 | overlap 34435 34437 AATGCTATATATTTA TTCCCTTCTTTTT TTA AAGAAGAGGGGAG GTTTTTGTTTTCATT TERM 35 34437 - 34463 + g 71 -11 -2.91657 | overlap 34436 34435 ATGCTATATATTTAT TCCCTTCTTTTT TTA AAGAAGAGGGGA GGTTTTTGTTTTCAT TERM 36 34550 - 34537 - G 90 -4.5 -5.41143 | overlap 34538 34539 CACCGTGGAAAAAAA CTGGC TCAA GCCAA AGCCTTTAAGGTCGC TERM 37 34936 - 34952 + H 81 -3.8 -5.3104 | opp_overlap 34931 34947, overlap 34947 ACAAAAATGATGGTT TTTTAG AAAAA CTAAAA TTTTATTTTTAGTCG TERM 38 34987 - 34947 - H 82 -7.2 -4.82901 | opp_overlap 34936 34947, overlap 34931 34953 GGTTTTTTAGAAAAA CTAAAATTTTATTTTTAG TCGTT CTAAAAATAAAATGATAG TAGTGTTAATTTTTA TERM 39 34981 - 34953 - H 93 -9.2 -4.82678 | opp_overlap 34947, overlap 34947 TTAGAAAAACTAAAA TTTTATTTTTAG TCGTT CTAAAAATAAAA TGATAGTAGTGTTAA SPA0033 35329 - 37047 + | sulfatase TERM 40 37088 - 37052 - T 77 -10.2 -3.44146 | opp_overlap 37036 37047 37045 37055, overlap 37055 TGTTTGCATAACTAA GTATGTTATGCGGCCG GTTAT CGACCGCATAACATTA TGGCTTATTTGCTAA TERM 41 37085 - 37055 - T 93 -16.3 -2.87274 | opp_overlap 37036 37047 37045 37055, overlap 37052 TTGCATAACTAAGTA TGTTATGCGGCCG GTTAT CGACCGCATAACA TTATGGCTTATTTGC TERM 42 37055 - 37085 + T 95 -14.8 -3.49938 | opp_overlap 37055 37052, overlap 37036 37047 37045 TTGCATAACTAAGTA TGTTATGCGGCCGG TTA TCGACCGCATAACA TTATGGCTTATTTGC SPA0034 38664 - 37093 - | putative secreted 5'-nucleotidase TERM 43 38728 - 38690 - R 83 -4.5 -5.35815 | overlap 38693 38694 TACATTAAAGAAAAA CAATGCCTGTAGTCGTG TCATT CACGACTACAAACCGGG GAAATTAAGTAATAT TERM 44 38725 - 38693 - R 93 -9.2 -4.74052 | overlap 38690 38694 ATTAAAGAAAAACAA TGCCTGTAGTCGTG TCATT CACGACTACAAACC GGGGAAATTAAGTAA TERM 45 38724 - 38694 - R 85 -12.7 -3.41991 | overlap 38693 38690 TTAAAGAAAAACAAT GCCTGTAGTCGTG TCATT CACGACTACAAAC CGGGGAAATTAAGTA SPA0035 39524 - 38763 - | hypothetical protein TERM 46 41634 - 41669 + H 100 -11.2 -4.86731 | gap 1, overlap 41637 CACTTAGGGCGATGC CCACCTGATCCGGTCAC TCT GTG-CCGGATCAGGTTC TTTTATTTCAGGGAA TERM 47 41637 - 41666 + H 100 -17.3 -4.54026 | gap 1, overlap 41634 TTAGGGCGATGCCCA CCTGATCCGGTCAC TCT GTG-CCGGATCAGG TTCTTTTATTTCAGG TERM 48 42468 - 42481 + G 74 -8.1 -4.01411 | opp_overlap 42447 42449, overlap 42462 42476 GGCGGCCTGGTGCGG CCTGC CGCC GCAGG TTTGCGTTTTTGCTC TERM 49 42476 - 42487 + G 78 -5.8 -4.7254 | opp_overlap 42449, overlap 42462 42468 GGTGCGGCCTGCCGC CGCA GGTT TGCG TTTTTGCTCCCACCT SPA0037 41692 - 42879 + | sulfatase regulatory protein TERM 50 43336 - 43364 + G 70 -3 -4.78848 | GAATTACAAAAACTG TCCCGTCGCGCT AATCA AGCGGAACGCGA TTTTGTGTTTCCCGC SPA0038 42904 - 44151 + | hypothetical protein TERM 51 44269 - 44214 - f 72 -4.9 -4.58395 | gap 2, opp_overlap 44213 44228 CGGACGGCTTAAAAA TCCAGAGTATTAATTTTCGTGGTCCCC ATGA GGGG-CGATGAG-ATTAATACACTGGA GATTTATCATGAATA TERM 52 44550 - 44540 - g 87 -8.2 -4.58663 | AGGATGCGGCAAAAA CGGC GAT GCCG GTAGAACATCTTTAC TERM 53 45775 - 45765 - g 74 -6.8 -4.2558 | opp_overlap 45765 CACGTTTGATGAAAA TGGC CGC GCCA TCTCTTGCCAGCCTG SPA0039 44278 - 45993 + | sulfatase TERM 54 46045 - 46028 - f 87 -6.9 -5.15634 | opp_overlap 46024 46028 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 55 46028 - 46045 + F 72 -9.1 -3.56704 | opp_overlap 46028, overlap 46024 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 56 46622 - 46660 + G 82 -11.1 -3.80174 | gap 1 CGCTGAAAATTTTCC TGATGGCGCTGGCGATCA TCGA TGACC-TCGGCGCCATCA TTATTATCGCACTGT TERM 57 46909 - 46882 - g 81 -4.1 -5.27335 | gap 1, overlap 46884 CCGCTGAAAGAAAAA CACGGACGCTCG CCGGC CAAGCGTCTG-G AGCATGTTCTGCACC TERM 58 46908 - 46884 - g 77 -7.8 -4.27026 | overlap 46882 GCTGAAAGAAAAACA CGGACGCTCG CCGGC CAAGCGTCTG GAGCATGTTCTGCAC nhaA 46156 - 47322 + | pH-dependent sodium/proton antiporter TERM 59 47457 - 47471 + G 90 -8.5 -4.82901 | AAGGTTCTGTCGTGG GCGCC GCAGA GGCGC TTTTTCTGACGCCGC TERM 60 48089 - 48101 + G 70 -3.3 -4.82901 | overlap 48090 AAGGCGTTTGGCGCG ACGCA TGA TGCGA TTTTTGTGGCGCCGA nhaR 47384 - 48283 + | transcriptional activator NhaR TERM 61 48299 - 48335 + T 85 -12.3 -3.3344 | opp_overlap 48301 48320, overlap 48302 ACATACCTACCGTAA TACTTCCGGCTGCGG AACTAAC CCGCAGCCGGAATCA TTCTACAAGTTCAGT TERM 62 48333 - 48301 - T 93 -15.6 -3.06671 | opp_overlap 48299 48302, overlap 48320 ATACCTACCGTAATA CTTCCGGCTGCGGA ACTAA CCCGCAGCCGGAAT CATTCTACAAGTTCA TERM 63 48302 - 48332 + T 100 -18.4 -2.83747 | opp_overlap 48301 48320, overlap 48299 TACCTACCGTAATAC TTCCGGCTGCGG AACTAAC CCGCAGCCGGAA TCATTCTACAAGTTC SPA0042 50377 - 48362 - | putative glycosyl hydrolase TERM 64 50090 - 50104 + g 71 -7.8 -4.0641 | opp_overlap 50090 CCGCAGGCGCCAAAA CTCCTG CAA CAGGGG TTTGTGTGGATGGCG SPA0043 51790 - 50417 - | putative transport protein TERM 65 52200 - 52214 + r 88 -8.5 -4.83169 | opp_overlap 52200 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT TERM 66 52214 - 52200 - R 100 -8.5 -5.64274 | opp_overlap 52200 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT rpsT 52509 - 52246 - | 30S ribosomal protein S20 yaaY 52615 - 52830 + | hypothetical protein ribF 52838 - 53776 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 67 53987 - 53969 - g 89 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCATATGCGAA TERM 68 55039 - 55016 - g 76 -3 -5.03314 | opp_overlap 55020 55036 55038, overlap 55017 55018 55020 TGCATGTCGAAAAAA TGCAGCACAG CTAT CCGTGCTGTT GGCGTCACAAAACGC ileS 53821 - 56655 + | isoleucyl-tRNA synthetase TERM 69 57019 - 57031 + G 75 -6.3 -4.65895 | GGCACGGCTTCGTTG TCGAT ATG ATCGA TTTTTACGTCGGCGA TERM 70 57070 - 57084 + G 80 -10 -4.07124 | TCGCGACGTTCAACC TTGCCG ATA CGGCAA TTTGTATCGGTGCTG lspA 56655 - 57155 + | lipoprotein signal peptidase TERM 71 57220 - 57263 + F 72 -5.3 -4.64157 | gap 2, opp_overlap 57202 57201 57221, overlap 57221 57261 AGCGCCATCAGGCAA ACGTGGTGCCGGATGGCGGTG AAAA CGCC-TTATCCGGC-CTACGG TTTTATCGTTCTTTG TERM 72 57221 - 57262 + F 70 -8.8 -3.36867 | gap 2, opp_overlap 57202 57201 57221, overlap 57220 57261 GCGCCATCAGGCAAA CGTGGTGCCGGATGGCGGTG AAAA CGCC-TTATCCGGC-CTACG GTTTTATCGTTCTTT fkpB 57310 - 57759 + | FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase TERM 73 58553 - 58533 - g 85 -12.5 -3.53224 | overlap 58536 GAGGCGTGGGTGAAA GACGCCGCC TGC GTCGGCGTC ACCGCAGGCGCTTCC ispH 57762 - 58712 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 74 58877 - 58859 - f 74 -6 -4.62783 | opp_overlap 58851 58859 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTGGGTTGTAAT TERM 75 58859 - 58877 + F 78 -6 -4.78752 | opp_overlap 58859, overlap 58851 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTGGGTTGTAAT TERM 76 59735 - 59717 - g 76 -3.1 -4.98531 | GCTGGAAAGGAAAAA CGATTGA ACTGA TCGATCG CGGTGAAAGCTACTT SPA0051 58912 - 60114 + | hypothetical protein TERM 77 60821 - 60871 + G 89 -8.9 -4.62336 | gap 1, overlap 60824 GTAGTATGCGCACTG GCGTCCGGATGCACGATCTCTGCG CTAT CGCCTGGCTGGTGCGTCCGGA-GC TTTTTACCCTGCAAT yaaF 60130 - 61044 + | ribonucleoside hydrolase RihC citB 61752 - 61066 - | transcriptional regulatory protein citb TERM 78 61104 - 61135 + g 79 -7.2 -4.40963 | TCTCCGGCCTGCCCA CTTTCCCGTAGCTG ATCT CCGCTTCGAGAAAG TTATTTTTCACGCCT TERM 79 61279 - 61304 + g 78 -6.8 -4.57581 | gap 1 GTTTTCATCAATTCC CCGCAG-TCCG CTATT CGGTTCTGCGG TTTGTTCTTTGGCCT SPA0054 63373 - 61754 - | putative transcriptional regulator TERM 80 62435 - 62450 + g 73 -10.4 -3.37796 | opp_overlap 62435 62434 GCGAAAGCTAATAAC CCAGCC CTGA GGCTGG TTGTCAATAATGACC TERM 81 62501 - 62515 + g 100 -2.1 -6.12458 | TTTCATTTGGTTAAA GGTGA CGATC TCATC TTTTTTGTTTTTTTG TERM 82 63500 - 63478 - R 95 -12.1 -4.27192 | opp_overlap 63473 AAATTTGGATGAAAA TGGGATACG ACATG CGTATCCCA TCCACTATTACATCG oadB 64791 - 63508 - | oxaloacetate decarboxylase beta chain TERM 83 63666 - 63695 + g 74 -2.8 -4.92757 | gap 1, overlap 63671 CCATCGGCACTGCCG ACACCCCGGCTGA ACCTA TCAGC-GGGTTGA TTTTGTTCTTACTGC oadA 66570 - 64804 - | pyruvate carboxylase subunit B TERM 84 65211 - 65227 + g 74 -7.2 -4.10453 | opp_overlap 65210, overlap 65190 GCAGTGGCTCAAACG CCGCCG GGTTA TGGCGG TTTTCGAGGAATTTC TERM 85 66147 - 66195 + g 71 -7.6 -3.92324 | gap 5, opp_overlap 66147, overlap 66180 TGGTGGTGTACGAGA GCGTGCCCTG--GGC-GTGCGC-GC CGTG GCTGCGCACCGCCTGCAGGGCG-GC TTTCATATTGCGCGG oadG 66825 - 66586 - | oxaloacetate decarboxylase subunit gamma SPA0058 68324 - 66984 - | citrate-sodium symporter TERM 86 67766 - 67750 - G 72 -11.5 -3.01708 | opp_overlap 67754 TAAATTTCAGACAGA GGCACGG CGC CCGCGCC GTTACTACCGCCCAT TERM 87 68424 - 68438 + H 79 -4.4 -5.12068 | GAATGGTTGTGTTTT TAATTA ATT TAATTA TTTTTATTAACTCTG TERM 88 69028 - 69014 - g 71 -4.2 -4.62471 | overlap 69015 GTCAACCGGGAAAAA CGATCG GCG CCATCG TCATGAACGCCAATC TERM 89 69080 - 69108 + G 76 -8.7 -3.96148 | opp_overlap 69079 69082, overlap 69085 69102 ATCTGGTGGAGCAAG CAGCGGCAGCCTG TGA CTGGCTGCATCTG TTTGTGCTCAAAGAA TERM 90 69329 - 69347 + G 73 -5.9 -4.37886 | AACATCTGGCTCCAG CGCTGGG AATTA CCCATCG TTTTGTCGGCAGTGA citC 68569 - 69612 + | [citrate (Pro-3S)-lyase] ligase citD 69642 - 69935 + | citrate lyase subunit gamma citE 69932 - 70801 + | citrate lyase beta chain citF 70812 - 72332 + | citrate lyase alpha chain SPA0063 72332 - 72883 + | hypothetical protein TERM 91 73199 - 73209 + G 75 -6.8 -4.4267 | overlap 73206 TGGTGTGAATACCCA TCGC AGG GCGA TTTTCGCTTTTGGCC TERM 92 73206 - 73216 + G 70 -6.8 -4.15565 | overlap 73199 AATACCCATCGCAGG GCGA TTT TCGC TTTTGGCCTGCTGAG citG 72861 - 73769 + | CitG protein TERM 93 73794 - 73825 + F 83 -8.8 -4.33274 | opp_overlap 73798, overlap 73796 73798 CTTTCATTCTCTCCA GCAATGATTCATCC TGCG GGATGAATCATGTC TTTTACTGATATCGC TERM 94 73796 - 73823 + F 79 -10 -3.76811 | opp_overlap 73798, overlap 73794 73798 TTCATTCTCTCCAGC AATGATTCATCC TGCG GGATGAATCATG TCTTTTACTGATATC TERM 95 73798 - 73821 + F 85 -12.6 -3.45743 | opp_overlap 73798, overlap 73796 73794 CATTCTCTCCAGCAA TGATTCATCC TGCG GGATGAATCA TGTCTTTTACTGATA TERM 96 73821 - 73798 - f 81 -12.6 -3.14344 | opp_overlap 73798 73796 73794 CATTCTCTCCAGCAA TGATTCATCC TGCG GGATGAATCA TGTCTTTTACTGATA dapB 73949 - 74770 + | dihydrodipicolinate reductase TERM 97 74825 - 74843 + F 100 -11.8 -5.26119 | opp_overlap 74825 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTGCCCC TERM 98 74843 - 74825 - f 95 -11.8 -3.99405 | opp_overlap 74825 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTGCCCC TERM 99 76557 - 76539 - g 80 -8.8 -4.0827 | AGATATGGACAGAAA CGTGGTGA TGA TCACCGCG CAGAACCACGGCTTT carA 75631 - 76779 + | carbamoyl phosphate synthase small subunit carB 76798 - 80025 + | carbamoyl phosphate synthase large subunit TERM 100 80079 - 80098 + F 100 -10.8 -5.80817 | opp_overlap 80079 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG TERM 101 80098 - 80079 - f 79 -10.8 -3.63707 | opp_overlap 80079 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG caiF 80299 - 80694 + | DNA-binding transcriptional activator CaiF caiE 81368 - 80772 - | carnitine operon protein CaiE TERM 102 80798 - 80822 + g 70 -9.9 -3.38324 | overlap 80798 ATTTTGGCTTCACGT CCGTCGTGCCT TTC AGGCGCGGCCG GTTTTCTTCGACCTG TERM 103 80798 - 80823 + g 91 -9.7 -4.64676 | gap 1, overlap 80798 ATTTTGGCTTCACGT CC-GTCGTGCCT TTC AGGCGCGGCCGG TTTTCTTCGACCTGC caiD 82264 - 81479 - | carnitinyl-CoA dehydratase TERM 104 81956 - 81980 + g 70 -9.9 -3.31263 | opp_overlap 81954 81950 GCCGCCAAACGCATA GCCGTTCACCG CGG CGATGACCGGC TTATCGAGGTCAAAT TERM 105 82286 - 82316 + r 81 -8.2 -4.48743 | opp_overlap 82286, overlap 82287 82288 TCTCCAGATAAATAG TTTCCCGGCGGGAG GGA TTCCTGCCGGAAGG TTTATTTCAGATTTT TERM 106 82287 - 82315 + r 71 -9.5 -3.27619 | opp_overlap 82286, overlap 82286 82288 CTCCAGATAAATAGT TTCCCGGCGGGAG GGA TTCCTGCCGGAAG GTTTATTTCAGATTT TERM 107 82288 - 82314 + r 70 -10.8 -2.55487 | opp_overlap 82286, overlap 82287 82286 TCCAGATAAATAGTT TCCCGGCGGGAG GGA TTCCTGCCGGAA GGTTTATTTCAGATT caiC 83871 - 82318 - | putative crotonobetaine/carnitine-CoA ligase TERM 108 83598 - 83618 + g 73 -5.3 -4.59773 | opp_overlap 83598 83610 GTAAGCGGGCATTAA TCGGCACCA TAA TGGCACCGA TTTTTGCCAGTCCAA TERM 109 83896 - 83932 + r 100 -13.8 -3.79519 | gap 1, opp_overlap 83891 TCCACTGAAATCAGG CGTGA-GCGCTAACCGG AAAA CCGATTAGCGCATCGCG TTTAATCCTCAACTT caiB 85151 - 83934 - | crotonobetainyl-CoA:carnitine CoA-transferase TERM 110 85233 - 85194 - R 77 -10.6 -3.30243 | opp_overlap 85226 85227, overlap 85197 85199 ATGTAGGCCGGATAA GCACAGCGCCATCCGGCA TGAT TGCCTGATGGCGACGCCC CGCGTCTTATCAGGC TERM 111 85230 - 85197 - R 82 -13.1 -2.8294 | opp_overlap 85226 85227, overlap 85194 85199 TAGGCCGGATAAGCA CAGCGCCATCCGGCA TGAT TGCCTGATGGCGACG CCCCGCGTCTTATCA TERM 112 85228 - 85199 - R 78 -12.1 -2.96274 | opp_overlap 85226 85227, overlap 85197 85194 GGCCGGATAAGCACA GCGCCATCCGGCA TGAT TGCCTGATGGCGA CGCCCCGCGTCTTAT TERM 113 85227 - 85239 + r 70 -9.1 -3.30124 | opp_overlap 85199 85197 85194, overlap 85226 TGATTGCCTGATGGC GACGC CCC GCGTC TTATCAGGCCTACAA caiA 86405 - 85263 - | crotonobetainyl-CoA dehydrogenase caiT 87957 - 86440 - | L-carnitine/gamma-butyrobetaine antiporter fixA 88447 - 89217 + | putative electron transfer flavoprotein FixA fixB 89233 - 90174 + | putative electron transfer flavoprotein FixB TERM 114 90492 - 90524 + G 70 -5.5 -4.49364 | overlap 90493 CGATGACTATCGACT ACTGCAATGGTGAAG ATG CTTCAGCGTCGCAGG TTTCTTATTCCGTTT TERM 115 90746 - 90730 - g 74 -7.9 -4.07568 | opp_overlap 90729 TCTGCTGGCTGAAAA GCTGGGC ATG GCCAAGC GTGTTGAGGCATCGC TERM 116 91455 - 91437 - g 95 -5.2 -5.42259 | overlap 91439 CCATGCGTAAAAAAA TCCTGCGC CAT GCGAAGAA AGTGGGCTTCATCAA fixC 90224 - 91510 + | putative oxidoreductase FixC TERM 117 91758 - 91747 - g 75 -5.8 -4.56775 | overlap 91755 ACGGCGCTGGAAAAA TGGG AATA CCCA CGCGGGACGTTTGGC fixX 91507 - 91794 + | ferredoxin like protein FixX TERM 118 91832 - 91890 + F 95 -16.6 -2.57931 | overlap 91841 91880 TAGGCCGGATTAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGTAAACGC CTTATCCGGCCTACA TERM 119 92232 - 92244 + G 70 -5.5 -4.41348 | opp_overlap 92213 TATCGGCGTTATCTC CGTGG CGA CCATG TTTGTTTCCACGCCG yaaU 91942 - 93282 + | putative metabolite transport protein SPA0081 93371 - 93601 + | putative lipoprotein SPA0082 93873 - 94295 + | hypothetical protein SPA0083 94809 - 94519 - | hypothetical protein SPA0084 95019 - 95213 + | hypothetical protein TERM 120 95535 - 95525 - f 100 -4 -6.09196 | TCTAAAATAAAAAAA TGAA CTT TTCA TCTAAATAATTTTTC TERM 121 95735 - 95724 - g 100 -4.4 -6.13503 | GAGTAATAAAAAAAA TCTG TCCG CAGA AGAGACGGATCTTAC TERM 122 95846 - 95830 - g 72 -3.6 -4.73388 | overlap 95832 AAGGCTGATGAAAAA TGCGCC GTCAA GGCGAA ACCGGCGTGGGATAA TERM 123 97271 - 97217 - g 95 -2.8 -5.76237 | overlap 97236 GAGATAAACAAAAAA CGGTGGCGCAAATCAAGCAGGAAATA TCC CATTTGCATCCTGATTTTAGCCATCG TTCAGGGACGCGGAT SPA0085 95707 - 97596 + | putative sulfatase TERM 124 97724 - 97760 + F 72 -9.3 -3.61988 | opp_overlap 97719, overlap 97719 GCTTCAACAATTACG CCTACTGGGCCAGGCTC TAA GTACCTGACCCATTAGG TTAATTTATGCGTCG TERM 125 99635 - 99661 + G 95 -15.2 -3.38812 | opp_overlap 99643, overlap 99633 99642 GGCCGCTGGGCGTAC CGGCAAAACAGC GTC GCTGGTTTGCCG TCTTATTAGGCCAGG TERM 126 99653 - 99643 - g 70 -6.8 -4.11216 | opp_overlap 99642 99635 99633 GGCGTACCGGCAAAA CAGC GTC GCTG GTTTGCCGTCTTATT TERM 127 99778 - 99790 + G 77 -4.7 -4.93296 | overlap 99777 99779 GTCGCGCTGTCGATG GCGGC TAC GCCGA TTTTTCTGGTGCTGC kefC 98674 - 100536 + | glutathione-regulated potassium-efflux system protein KefC folA 100735 - 101214 + | dihydrofolate reductase TERM 128 101219 - 101257 + T 82 -13.3 -3.02263 | gap 2, overlap 101234 AACGTCGTTAACGCT GTAGTGCCGGATGGCGGCG AAA CGCC-TTATCCGGC-CTAC TCTTGAGCCAGATGT apaH 102168 - 101320 - | diadenosine tetraphosphatase apaG 102556 - 102179 - | ApaG ksgA 103380 - 102559 - | dimethyladenosine transferase pdxA 104366 - 103377 - | 4-hydroxythreonine-4-phosphate dehydrogenase surA 105652 - 104366 - | peptidyl-prolyl cis-trans isomerase SurA TERM 129 105302 - 105259 - G 72 -11.2 -3.14564 | gap 1 TCATCTCTTTACGAA TCTGG-TTACGGTAGGTTGAA TAG TTCAGCCCATCGTAAGCCAGA CGGCTGCGCATCTGA imp 108060 - 105706 - | organic solvent tolerance protein TERM 130 106348 - 106332 - G 71 -5.9 -4.23674 | TTTGACCAACAGAAA CGTTAAA ACG TTCAACG GCGGCATCATCATAA TERM 131 108344 - 108370 + G 77 -8.6 -4.10161 | opp_overlap 108337 AAGATAATTGGCGTC GCCGTAGCCC TGATGAT GGGCGGCGGC TTTTGGGGCGTGGTC TERM 132 108461 - 108472 + G 77 -3.6 -5.00616 | opp_overlap 108454 GCCAACCAGCGGGAA CGGC AGGC GCTG TTTTTTGCCACCACC djlA 108314 - 109126 + | DNA-J like membrane chaperone protein rluA 109880 - 109221 - | 23S rRNA/tRNA pseudouridine synthase A hepA 112798 - 109892 - | ATP-dependent helicase HepA TERM 133 110239 - 110255 + g 75 -3.6 -4.96848 | overlap 110234 110233 110237 CAAACTCGACCTGGG CGGCCA GATTG TTGCCG TTTTTATCTAACAGC TERM 134 110359 - 110377 + g 85 -6.7 -4.85782 | gap 1 CCAGTTCGACCAGCA GCG-TGCC GACG GGCAGCGC TTTATTTTTCAACAG TERM 135 110747 - 110764 + g 70 -6.9 -4.15106 | overlap 110737 110740 110761 CAGCAGGCGGTCGCG GCCCTGT TCTA ACTGGGC TTTTAGCGCTTCATG TERM 136 111408 - 111423 + g 74 -7.5 -4.07568 | opp_overlap 111402, overlap 111402 111403 TAGAGCATATCGCGG GCGCG ATCTTC CGCGC TTTTACGCGCGCCCA polB 115323 - 112972 - | DNA polymerase II TERM 137 113175 - 113185 + g 81 -6.8 -4.71426 | ACTGCGCCGGACGAC CCTG CTT CAGG TTTTGTTCATCCGCC TERM 138 115661 - 115677 + r 77 -10.9 -3.2029 | opp_overlap 115660 AAAAGCCCGAAGGAT CATCAGC CAC GCTGATG TTGAATGTATTGCTT SPA0099 116103 - 115663 - | putative IS element transposase SPA0100 116123 - 117331 + | putative IS element transposase SPA0101 117898 - 117401 - | hypothetical protein TERM 139 117669 - 117634 - G 89 -9 -4.56597 | overlap 117636 GTCTGGCCTGAAAAA CGGGAGAAGGCGTT TTTCCGCT AACGCCTGCTCCTG CGACAATCGCGCAGT TERM 140 118075 - 118094 + H 71 -3.7 -4.78981 | opp_overlap 118075 TATTTCTCGGATTAA CAAAAAA GCGATA TTTTTTG TTTGTTTTAATTAAT TERM 141 118735 - 118716 - g 83 -12.8 -3.20858 | opp_overlap 118716 GACCAGATTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA TERM 142 118716 - 118735 + G 95 -10.6 -4.58283 | opp_overlap 118716 GACCAGATTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA SPA0102 118323 - 118742 + | hypothetical protein araD 119443 - 118748 - | L-ribulose-5-phosphate 4-epimerase araA 121086 - 119584 - | L-arabinose isomerase TERM 143 120538 - 120555 + g 74 -7.7 -4.18197 | gap 1 GACTTCACGCATATT GTC-GCCG AAG CGGCAGAC TTTTAGCTGGCGGGT TERM 144 120697 - 120686 - G 71 -5.8 -4.36914 | CGCGCGCCGATAAAA CCGA ACTC TCGG CCGCCATGCGCAGTC araB 122806 - 121097 - | ribulokinase TERM 145 122169 - 122144 - G 71 -7.6 -4.00756 | gap 2, opp_overlap 122144 GAGTTCATCAAAGAA GCTCGCGGGCGG CAGA CCGCCC-C-AGC TTTCATGCCACAGTG araC 123147 - 123992 + | DNA-binding transcriptional regulator AraC yabI 124111 - 124878 + | DedA family integral membrane protein thiQ 125624 - 124917 - | thiamine transporter ATP-binding subunit thiP 127215 - 125608 - | thiamine transporter membrane protein TERM 146 125837 - 125818 - G 70 -9.2 -3.67564 | opp_overlap 125805 125824, overlap 125808 125805 AAGTACGCAGGCAAA CGCCAGCG CCTG CGCCAGCG GACGTTTCAGCGCCC TERM 147 126628 - 126609 - G 77 -4.2 -4.95758 | gap 1, opp_overlap 126609, overlap 126610 126612 126613 AGCAGAGCATAAAAA TCAGCGCCG CGA CGG-GCGGA ATTTGGCGGCGCAGC tbpA 128174 - 127191 - | thiamine transporter substrate binding subunit TERM 148 127818 - 127833 + g 78 -6.8 -4.56597 | opp_overlap 127806 127818 ATAGCCGTAATCGAA CGGCAC AAAT GTGTCG TTTTTCCAGCCGCCG yabN 130010 - 128352 - | transcriptional regulator SgrR TERM 149 128804 - 128816 + g 71 -4.7 -4.56597 | TCAGCGTGAGGGTTT CCAGC CCG GCGGG TTTTTCGCCCGGGCC TERM 150 129837 - 129807 - G 70 -9.7 -3.32022 | overlap 129808 TCCGGTATACAGGAA CGTCAGACGCGAA CGCTT TCCGCGTCCGACC TCGGCTTCCCATGTT TERM 151 129836 - 129808 - G 78 -13.2 -2.58999 | overlap 129807 CCGGTATACAGGAAC GTCAGACGCGAA CGCTT TCCGCGTCCGAC CTCGGCTTCCCATGT TERM 152 130287 - 130309 + r 100 -16.4 -5.95539 | opp_overlap 130284 AGCCTAAAATCACCC GCCAGCAGAT AAT ATCTGCTGGC TTTTTTTATTTCGGC TERM 153 130446 - 130428 - R 100 -8.8 -5.30686 | AAGACGTATAAAAAA TGCCGGAA TAT CCCCGGCA TGAGCGACTGATGAG leuD 131166 - 130561 - | isopropylmalate isomerase small subunit leuC 132577 - 131177 - | isopropylmalate isomerase large subunit TERM 154 131629 - 131607 - G 81 -12 -3.52192 | TGTAAGCCCATATAA GCCAGCGC TTTTTCG GCGCTGGC GCGCTCAACCGGATC TERM 155 131985 - 132006 + g 74 -7.9 -4.12188 | AATTCAACCACGTGT CCGGTGCCG CCGG CGCTACCGG TTTTACCGATGATCG TERM 156 132096 - 132108 + g 70 -9.1 -3.6502 | ATGGTTTTAGCGCGC CCCTG TTT CAGGG TTTGCGTCGCCAGTA leuB 133671 - 132580 - | 3-isopropylmalate dehydrogenase TERM 157 133592 - 133574 - G 74 -6.6 -4.36262 | opp_overlap 133574, overlap 133575 ATACGCATATCAAAA CGGCTGCG TAC CGCATCCA TAACTTTCAGGGCTT leuA 135242 - 133671 - | 2-isopropylmalate synthase TERM 158 133708 - 133718 + g 70 -5.4 -4.44355 | TCTTTATTTTGAGCT TTGC GTT GCAA TTCTTTTTCAACTTC TERM 159 135285 - 135312 + r 100 -14.2 -3.75629 | opp_overlap 135290, overlap 135290 TTGCGTCAGGCATAA AAAAACCCGCGC AACG GCGCGGGTTTTG TTTGACTTCGAGCTG TERM 160 135290 - 135307 + r 100 -14.1 -4.94058 | opp_overlap 135290, overlap 135285 TCAGGCATAAAAAAA CCCGCGC AACG GCGCGGG TTTTGTTTGACTTCG TERM 161 135307 - 135290 - R 100 -14.1 -5.64274 | opp_overlap 135290 135285 TCAGGCATAAAAAAA CCCGCGC AACG GCGCGGG TTTTGTTTGACTTCG leuL 135416 - 135330 - | leu operon leader peptide leuO 136073 - 137017 + | leucine transcriptional activator TERM 162 137024 - 137060 + F 100 -16.2 -4.65838 | opp_overlap 137022 137030 AAGCGATAAAACCGG GCAGAATAAATCAGAA ACAAA TTCTGGTTTATTCTGC TTTTTAGCGTATATC ilvI 137339 - 139063 + | acetolactate synthase 3 catalytic subunit ilvH 139063 - 139557 + | acetolactate synthase 3 regulatory subunit TERM 163 139681 - 139706 + F 100 -7.6 -5.75945 | CCAACAGGAATTATC GCCCAACC CAATATCACC GGTTGGGC TTTTTTTTGCGAAAT fruR 139841 - 140845 + | DNA-binding transcriptional regulator FruR yabB 141451 - 141909 + | cell division protein MraZ mraW 141911 - 142852 + | S-adenosyl-methyltransferase MraW TERM 164 142929 - 142942 + G 70 -6.7 -4.19238 | TGCCTTGCCTGGCGT GATCG GTGA CGATC TTTTGCGGTTCGGGA TERM 165 143173 - 143160 - g 81 -8.1 -4.2803 | opp_overlap 143159 143157 GATCGCAACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCTC ftsL 142849 - 143214 + | cell division protein FtsL ftsI 143230 - 144996 + | penicillin-binding protein 3 precursor TERM 166 145342 - 145306 - g 70 -7.1 -4.14739 | overlap 145308 145336 TGAGCCATCTGAAAA CATGCGTCTGGTGGCGG TGA CCGGCACCAATGGCAAG ACCACCACCACCCAA TERM 167 146110 - 146084 - g 100 -12.2 -4.57073 | GATGCGCTGGAAAAA GCGTTGCAGGCG GCG CGCCTGCACTGC GCCGGAAAATTGTGG murE 144983 - 146470 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murF 146467 - 147825 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 168 148756 - 148770 + G 71 -5.7 -4.2349 | opp_overlap 148755 148756 TGGGTTCCTTTAAAC TACGC GGACA GCGTA TTTTCCGTATGGCGC mraY 147819 - 148901 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 148904 - 150220 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 169 151001 - 151028 + G 77 -7.8 -4.26076 | gap 1 ATCCGTTCGGCAGCG GTTATCAGCTGAC GCA GTC-GCTGATGGC TTTTGGTCGCGGTGA ftsW 150220 - 151464 + | cell division protein FtsW murG 151461 - 152528 + | N-acetylglucosaminyl transferase murC 152647 - 154122 + | UDP-N-acetylmuramate--L-alanine ligase TERM 170 154523 - 154508 - g 95 -5.4 -5.30348 | gap 1, opp_overlap 154508 AGCGAAGAACAAAAA GCG-CGA ATT TCGGCGC TGGGTTTACCGCTGA ddl 154115 - 155035 + | D-alanine--D-alanine ligase ftsQ 155037 - 155867 + | cell division protein FtsQ ftsA 155864 - 157126 + | cell division protein FtsA ftsZ 157187 - 158338 + | cell division protein FtsZ TERM 171 158518 - 158508 - g 82 -5.4 -5.04385 | CACACCGGCAAAAAA GTCA CCC TGAC ATTACGCCCTGCGCC TERM 172 159283 - 159273 - g 70 -6.8 -4.08216 | GCAGTCCTGGCAAAA CAGG AAG CCTG GGAATTTGTGACCTT lpxC 158439 - 159356 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 173 159381 - 159424 + F 100 -10.3 -5.90981 | opp_overlap 159380 159379 159381, overlap 159368 CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTCG TTTTTTTTACTATCC TERM 174 159424 - 159381 - f 70 -10.3 -2.52946 | opp_overlap 159368 159381, overlap 159380 159379 CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTCG TTTTTTTTACTATCC TERM 175 159492 - 159505 + F 74 -5.9 -4.64334 | opp_overlap 159492 GGTTAAATGGAAACA CGGCG CGTT CGCTG TTTTCTTAGCCGATT yacA 159635 - 160132 + | SecA regulator SecM TERM 176 160162 - 160178 + F 74 -11.5 -2.79175 | overlap 160161 TTTACTTTATTTGTA GCTCCGC GGC GCGGGGC ATTTGAGACTTTATT TERM 177 161135 - 161148 + G 70 -9.5 -3.36515 | overlap 161133 CGTCACCGCCGCGCT GCGCG CGCA CGCGC TGTTTACCCGTGACG TERM 178 161310 - 161300 - g 75 -6.8 -4.50661 | opp_overlap 161301 161303, overlap 161301 161303 AATTCAGAATGAAAA CCAG ACG CTGG CGTCTATTACCTTCC secA 160194 - 162899 + | preprotein translocase subunit SecA TERM 179 163030 - 163013 - f 100 -12.7 -4.74453 | opp_overlap 163013 GAACACAGGTAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA TERM 180 163013 - 163030 + F 100 -12.7 -5.28176 | opp_overlap 163013 GAACACAGGTAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA mutT 163051 - 163446 + | nucleoside triphosphate pyrophosphohydrolase SPA0140 164469 - 163480 - | putative aldo/keto reductase TERM 181 164264 - 164242 - G 75 -6.2 -4.56597 | opp_overlap 164242 164246, overlap 164244 164245 TTTCGTCGCTAAAAA TACCCGATCG CGA CGATCGGCGA TGGCTTTTCCGACTA TERM 182 164262 - 164244 - G 73 -8.8 -3.90048 | opp_overlap 164242 164246, overlap 164242 164245 TCGTCGCTAAAAATA CCCGATCG CGA CGATCGGC GATGGCTTTTCCGAC TERM 183 164261 - 164245 - G 75 -12.3 -2.93708 | opp_overlap 164242 164246, overlap 164244 164242 CGTCGCTAAAAATAC CCGATCG CGA CGATCGG CGATGGCTTTTCCGA SPA0141 164555 - 165496 + | LysR family transcriptional regulator TERM 184 165515 - 165545 + T 72 -8.3 -3.69341 | gap 1, opp_overlap 165526, overlap 165526 TCTTCGCTCCAGTCG TCGCTATCAGACGG GTCG CCG-CTGCTGGCGA TTCGTTTCTCTTCGG yacG 165684 - 165493 - | zinc-binding protein TERM 185 165526 - 165549 + g 80 -8.8 -4.1891 | opp_overlap 165526, overlap 165515 GTCGTCGCTATCAGA CGGGTCGCCG CTGC TGGCGATTCG TTTCTCTTCGGCGGC TERM 186 165633 - 165607 - G 72 -3.7 -4.77165 | GCGTTTAGAACAAAA TGGGCGGAA GGGGCTAAT TTCCCCCCA GACGACCGGTTTACC yacF 166437 - 165694 - | hypothetical protein coaE 167057 - 166437 - | dephospho-CoA kinase TERM 187 166665 - 166688 + g 74 -4.5 -4.7254 | overlap 166686 CGTTTCGGGCATCAC GTCAACCAC CAGTAC GCGGTTGGC TTTTTGATACAGCCT TERM 188 166849 - 166838 - G 74 -2.2 -5.0538 | overlap 166840 CCGGATGCGAAAAAA TACG CTCA CGCA GCGCCCGGCGACGTA TERM 189 167651 - 167620 - g 74 -2.2 -5.03314 | gap 1, opp_overlap 167629, overlap 167622 CTGATTTCGAAAAAA CCGTGCAG-ATTCTG GCG CTGAATCCTGCGCTG AACTTTGTCTGTATT guaC 167283 - 168326 + | guanosine 5'-monophosphate oxidoreductase TERM 190 168333 - 168356 + T 93 -14.6 -3.32963 | opp_overlap 168329 AGCCTCTAATATTCT GGCTGGCGTA CATG TGCGCCAGCC TTATCCCATCCCGCT hofC 169559 - 168357 - | type IV pilin biogenesis protein hofB 170934 - 169549 - | hypothetical protein ppdD 171381 - 170944 - | putative major pilin subunit TERM 191 171593 - 171571 - R 100 -17 -2.91582 | CAGGTGATTTATAGA CCCGACGGCG CAG CGCCATCGGG CGGAGAGGATCAGCG nadC 172496 - 171603 - | quinolinate phosphoribosyltransferase ampD 172584 - 173147 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 173144 - 173998 + | regulatory protein AmpE SPA0152 175040 - 174090 - | putatuve glycosysl hydrolase TERM 192 174843 - 174859 + g 71 -5.7 -4.35524 | opp_overlap 174843, overlap 174832 174845 CGGTGCCCAGATAAG CTGGCTC ATC GGGCCTG TTTTCGGTTTGCGCC SPA0153 176446 - 175040 - | putative symporter TERM 193 175323 - 175295 - G 72 -3.8 -4.82667 | gap 1, opp_overlap 175303, overlap 175296 CCAGGAGAGCAAAAA GCC-GACCATCGC CCCG GCAATCGCCAGGC CCAGTTTCAGGAAGA TERM 194 175538 - 175514 - G 85 -11.3 -4.03815 | opp_overlap 175513 175511, overlap 175509 175528 ATCAAAGAAATAGAA CGCGCAGGAGA AAA TCGCCAGCGCG ATATTGGTCCAGAAA TERM 195 175539 - 175528 - G 73 -5.8 -4.4648 | opp_overlap 175513 175511, overlap 175514 175509 ACGCGCAGGAGAAAA TCGC CAGC GCGA TATTGGTCCAGAAAA TERM 196 176592 - 176569 - R 100 -16 -3.51924 | CTGTGAGGCAGATAA CACCCTCCCC GGAC GGGGAGGGCG GAAAAGTAACGCCAC aroP 177980 - 176610 - | aromatic amino acid transporter TERM 197 176964 - 176949 - G 73 -10.4 -3.38272 | GAGCAGCACGCACAA CGCCGT CACG ACGGCG GAAACCAAAATGGAG TERM 198 177767 - 177751 - G 74 -7.9 -4.11484 | opp_overlap 177754, overlap 177754 GCGAAGTGGCTAAAA GAGCCGG CGA CCGGTTC TTCAACCACCATCTC pdhR 178546 - 179310 + | transcriptional regulator PdhR TERM 199 179433 - 179379 - f 74 -8.1 -3.90112 | gap 1, opp_overlap 179400, overlap 179383 179386 TGCGCGGCAACTAAA CGCAGAACCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGGTTCCA-G ATAACTCAACGTATT TERM 200 179430 - 179383 - f 86 -14.4 -2.70979 | opp_overlap 179400, overlap 179379 179386 CGGCAACTAAACGCA GAACCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGGTTC CAGATAACTCAACGT TERM 201 179427 - 179386 - f 79 -10.3 -3.49878 | opp_overlap 179400, overlap 179383 179379 CAACTAAACGCAGAA CCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGG TTCCAGATAACTCAA TERM 202 181585 - 181561 - g 71 -12.1 -2.50479 | overlap 181560 181557 181565 CTGAACGAAAACTAC CACATGCCGGC CAT GCCAGCAGGTG CCGAGGAAGGTATCC aceE 179470 - 182133 + | pyruvate dehydrogenase subunit E1 TERM 203 182461 - 182427 - g 100 -14.2 -4.33203 | overlap 182424 GAAGAGAAGAAAGAA GCGGCTCCGGCAGCAG CAC CTGCTGCGGCAGCGGC GAAAGACGTTCACGT TERM 204 182740 - 182718 - g 70 -9 -3.69323 | overlap 182697 GCAGCACCAGCGAAA GCGGAAGCCG CTC CGGCTGCGGC TGCTCCAGCAGCAGC TERM 205 183550 - 183540 - g 71 -8.2 -3.78775 | opp_overlap 183540 GTCTTCATCATGAAA GCGG TTG CCGC TGCTCTGGAACAGAT aceF 182148 - 184037 + | dihydrolipoamide acetyltransferase TERM 206 184046 - 184063 + F 100 -14.1 -5.88471 | opp_overlap 184046 GATGTAAGCGAAAAA GCCGGCC CGAC GGCCGGC TTTTTTTTGATAATC TERM 207 184063 - 184046 - f 100 -14.1 -4.75174 | opp_overlap 184046 GATGTAAGCGAAAAA GCCGGCC CGAC GGCCGGC TTTTTTTTGATAATC TERM 208 185020 - 185007 - g 78 -2.3 -5.16572 | opp_overlap 185013 ATGGAAGGCAAAAAA GCCCC GGCT GAAGC GCAGCGTTATGATGC TERM 209 185103 - 185075 - g 73 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCGGGC AAA GCAGGCGTGGAAG TTGACGACCGTGGCT lpdA 184239 - 185663 + | dihydrolipoamide dehydrogenase TERM 210 185722 - 185697 - f 72 -10.5 -2.89564 | opp_overlap 185702, overlap 185702 GCGCCACCCGATACA GAAAAGCGGCT TTAC AGCCGCTTTTT TTATGCATGGCAAAT TERM 211 185717 - 185702 - f 93 -10.4 -4.61199 | opp_overlap 185702, overlap 185697 ACCCGATACAGAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG TERM 212 185702 - 185717 + F 100 -10.4 -5.64274 | opp_overlap 185697 185702 ACCCGATACAGAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG SPA0159 185952 - 186236 + | hypothetical protein SPA0160 187065 - 186274 - | hypothetical protein TERM 213 186554 - 186573 + g 71 -4.9 -4.67234 | opp_overlap 186567, overlap 186556 186567 ACGTCGCCTGCTTTG GTTGGCC AGTACA GGCCATC TTTTTGGCCTTCGCT TERM 214 186925 - 186938 + g 73 -5.9 -4.42765 | GTCATCGCCCAGTAG CGCGG TAAG CTGCG TTTCGTTTTTTCCGG yacH 188706 - 187078 - | hypothetical protein TERM 215 187387 - 187414 + g 70 -3.2 -4.68724 | gap 1, overlap 187389 GGATTTATTCAGTGT CTGCTG-CGCCGC CTC GCGACGACTGCTG TTTTGTGTTCCGTCA TERM 216 189621 - 189591 - g 76 -3.3 -5.00616 | gap 1, opp_overlap 189576 CGCTGGCGGAAAAAA TCACC-GTCACCGT TTTC AAAGTGACCGGCGA AACGAATACCGACGA TERM 217 190823 - 190799 - g 71 -5.7 -4.30987 | ACCGTTGAGAAGAAA GGCAAGAAAAA CAT CTTCTCTGGCC GCATCCTGGAAATCG TERM 218 191622 - 191601 - g 70 -5.1 -4.38712 | opp_overlap 191604, overlap 191603 191604 CGCAGGTGGATAAAA CAGCGGTAG ATAC CTACCGTTA TCTGAACTTTGACCA acnB 189095 - 191692 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 219 191790 - 191771 - f 83 -9.2 -4.37092 | opp_overlap 191771 ACCGGGCCTACAAAA CCCATCGC AACT GCGGTGGG TTTTTATTTTCATTC TERM 220 191771 - 191790 + F 100 -11.4 -5.54338 | opp_overlap 191771 ACCGGGCCTACAAAA CCCATCGC AACT GCGGTGGG TTTTTATTTTCATTC TERM 221 191811 - 191821 + F 91 -2.4 -5.88565 | ATTTTCATTCCGCCT GCTG TTC CCGC TTTTTTTCTTCTCCG yacL 191880 - 192242 + | hypothetical protein TERM 222 192324 - 192340 + F 100 -13.7 -5.24129 | TCACCACACATTCCA GCCGGGA GTA TCCCGGC TTTTTTATAGCAGAA TERM 223 192582 - 192599 + G 71 -8.4 -3.90744 | CAGGCGCTTGAGATC GGCGGT TTTACC ACCGCC TTATTTAAAAACGGC TERM 224 192623 - 192611 - g 95 -10.5 -4.65895 | opp_overlap 192610 192618 CGCCTTATTTAAAAA CGGCG CGG CGCCG CTAATTGGCGCTTTT TERM 225 192618 - 192634 + G 83 -7.2 -4.53765 | opp_overlap 192611, overlap 192610 TTTAAAAACGGCGCG GCGCCG CTAAT TGGCGC TTTTCTGCTGTGTAT TERM 226 193155 - 193174 + G 71 -4.2 -4.56883 | ATTCTGCTCGGCGTG CTGACAAC GTTC GTTGGCGG TTTCTTTAATATTCG kdgT 192477 - 193430 + | 2-keto-3-deoxygluconate permease ygbK 193427 - 194698 + | hypothetical protein pdxA 194688 - 195671 + | 4-hydroxythreonine-4-phosphate dehydrogenase 2 TERM 227 195933 - 195894 - g 100 -15 -4.90869 | overlap 195897 195898 ACCACCAATGAAAAA CAACTGCGATCGCCCGCT GAAA AACGGGCGATCGCACGCG TTGCCGCATCGCTGG TERM 228 195930 - 195897 - g 100 -17.5 -4.54681 | overlap 195894 195898 ACCAATGAAAAACAA CTGCGATCGCCCGCT GAAA AACGGGCGATCGCAC GCGTTGCCGCATCGC TERM 229 195929 - 195898 - g 100 -21 -3.31182 | overlap 195897 195894 CCAATGAAAAACAAC TGCGATCGCCCGCT GAAA AACGGGCGATCGCA CGCGTTGCCGCATCG SPA0167 195681 - 196448 + | putative transcriptional regulator speD 197272 - 196478 - | S-adenosylmethionine decarboxylase TERM 230 197254 - 197264 + g 72 -2.4 -4.93595 | GATTGTTAAAGCCAT GCAG TTT CAGC TTTTTCAATTTTTAT speE 198153 - 197293 - | spermidine synthase TERM 231 197823 - 197854 + g 72 -2.2 -4.83615 | gap 1, opp_overlap 197814 197810, overlap 197829 197835 ACGAGACTACGCCAG CGTCGATCTCCACCA TGG TGATGGTT-TCGACG TTTTTATGCCGGGTA TERM 232 198235 - 198210 - R 81 -12.7 -3.16154 | opp_overlap 198213, overlap 198213 CAACATCATAGCTAA CAATGACCGTG GATG CACGGTCATTA TTTCAGCAATAGGAT TERM 233 198213 - 198232 + r 95 -12.2 -3.91716 | opp_overlap 198210 198213 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG TERM 234 198232 - 198213 - R 93 -12.2 -3.71487 | opp_overlap 198213, overlap 198210 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG yacC 198607 - 198260 - | hypothetical protein TERM 235 198860 - 198885 + G 70 -6.7 -4.07568 | CTGGGGGTTGCATCA GCGCTGCCGCT GTGG AGCCGCGCCGC TTTTGCCGCCGAACG TERM 236 199280 - 199243 - g 71 -9.7 -3.52906 | opp_overlap 199255, overlap 199241 199251 TCATCCGCACAAACA CGGCAAAACCGGGCGCC AGGT GGCGATGGGCCTTGCCG GACTGGTGCTGATTG TERM 237 200261 - 200249 - g 76 -10.5 -3.70811 | overlap 200242 TCAGAGAATGGCAAA GCGCC AGC GGCGC ACAGAACGGGCTGGA yacK 198809 - 200419 + | multicopper oxidase TERM 238 200470 - 200489 + T 100 -15 -3.35358 | opp_overlap 200470, overlap 200464 CGCCACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG TERM 239 200489 - 200470 - T 100 -15 -3.30124 | opp_overlap 200470 200464 CGCCACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG gcd 202887 - 200497 - | glucose dehydrogenase TERM 240 201307 - 201321 + g 70 -7.1 -4.07885 | GAACGGCTGAGTTTT GGCGA CATAA TCGCC TTTTGCCGCGCCCTG TERM 241 201327 - 201345 + g 75 -5.8 -4.56597 | CATAATCGCCTTTTG CCGCGCCC TGC GGGACCGG TTTTTCCGGAGCGGG TERM 242 203135 - 203115 - g 71 -11.9 -2.53015 | ATACTGTTGAAGTCA TGATCCCCG AAG CGGAGATCA AAGCACGTATTGCCG hpt 203093 - 203629 + | hypoxanthine-guanine phosphoribosyltransferase yadF 204349 - 203687 - | carbonic anhydrase TERM 243 203740 - 203751 + g 91 -2.2 -5.84381 | opp_overlap 203738 TACCCTTATGATAGC CGTT CTCC AGCG TTTTTTTGTTGGTGG TERM 244 203928 - 203940 + g 73 -5.5 -4.56597 | AGCGCGTCCAGACGT TGCTC TTC GGGCA TTTTTCCCAACAGCG TERM 245 204531 - 204495 - g 100 -5.1 -5.57054 | gap 1, opp_overlap 204495 204496, overlap 204496 AACAACTTAAAAAAA CCTATCCCG-GCGGCG TTCAGG CGCTGCGCGGCATAGA TTTGCAGGTCGAAGC TERM 246 205139 - 205123 - g 76 -5.1 -4.72986 | TACCTCCATGAAAAA TCTGCTT TCA AAGCTGA AATCGGAGACGTTTA yadG 204458 - 205384 + | ABC transporter ATP-binding protein TERM 247 205927 - 205941 + G 71 -6.4 -4.2828 | overlap 205916 CTGACGCCGCTGACC TACCTC GGC GGGGTA TTTTACTCGCTGACG yadH 205381 - 206151 + | ABC transporter integral membrane protein TERM 248 206157 - 206187 + F 87 -10.5 -4.10657 | opp_overlap 206157, overlap 206158 GCGTAGCTGATACGA TTCTCCTCTTCTC CTGGA GGGAAGAGGAGAC TTTTGACGGCTGTCA TERM 249 206158 - 206186 + F 85 -14 -3.06073 | opp_overlap 206157, overlap 206157 CGTAGCTGATACGAT TCTCCTCTTCTC CTGGA GGGAAGAGGAGA CTTTTGACGGCTGTC TERM 250 206460 - 206470 + G 71 -8.2 -3.88946 | TTAACCGACATTTCC GGCG CGA CGCC TTATTGTGTAGCGTC yadI 206256 - 206696 + | putative PTS system IIA component TERM 251 206710 - 206734 + F 72 -2.7 -5.05782 | opp_overlap 206731, overlap 206731 GATCAATACCATTGA CGACGCTTTTG CTA CAATAACGGCG TTTTTTCGCCTCGGT TERM 252 206878 - 206850 - g 74 -10.4 -3.52909 | gap 1, overlap 206848 GCAAACGACGAAAGA TGCCGCC-ATCTG GTCG CAGATTGGCGACA AAATGGTGACCGTAG yadE 206764 - 207987 + | hypothetical protein stkG 209050 - 207989 - | putative fimbrial protein stkF 209661 - 209062 - | putative fimbrial protein TERM 253 209415 - 209405 - G 77 -8.2 -4.15006 | opp_overlap 209408 209409, overlap 209406 AGACGCACGTTAAAA GGCG TGC CGCC CGCCTCGTCGGTAGG stkE 210237 - 209680 - | putative fimbrial protein TERM 254 209935 - 209955 + g 75 -6.7 -4.52781 | opp_overlap 209927 TAAATTATCACCGGA GCAGGTGCC GCC GGTGCCCGC TTTTGCTTCTACTTC stkD 210836 - 210264 - | putative fimbrial protein stkC 213468 - 210871 - | putative outer membrane usher protein TERM 255 210945 - 210959 + g 75 -7.1 -4.42806 | CAGCTAATTGGTAAC GCACC GTACA GGTGC TTTCTTTACCACTGC TERM 256 211177 - 211202 + g 75 -6.1 -4.55128 | gap 1, opp_overlap 211158 211167, overlap 211180 CACAACGGCGCCGCT GCG-CGGTACGG TAA CCGTGCTGGTGC TTTTGATTTCAACAT TERM 257 212109 - 212123 + g 71 -6.4 -4.3586 | CGTTAAATGAGGTAT TGGTCG CCT CGATCA TTTTGCTATAGGTCA TERM 258 213507 - 213489 - R 73 -11 -2.71745 | opp_overlap 213489, overlap 213488 TTCCGAATAATTAAC GTGGACCA GAA TGGCCCAC TACATTGGTACGTAA stkB 214288 - 213536 - | putative chaperone protein EcpD TERM 259 214347 - 214324 - R 95 -11 -4.67641 | opp_overlap 214324 214346 ACTTTAAAATTAAAA TCCCCCAGCA CAGC CGCTGAGGGA TTGGCTAATCTTTTT stkA 214980 - 214375 - | major fimbrial subunit TERM 260 215243 - 215204 - R 100 -10.2 -5.47218 | gap 1, opp_overlap 215203 215204 215206 GGTGATTTAAAAAAA GACAACCCGTCCCAAAATA TGT TTTTCTGGAA-GGGTTGTC CTATTATTGAAAATC TERM 261 215269 - 215257 - R 76 -7.7 -4.21194 | TCCTATTATTGAAAA TCAGG CAA CCTGA ACCGGAATGGCTTTC panD 215637 - 215257 - | aspartate alpha-decarboxylase TERM 262 215700 - 215717 + r 74 -5.5 -4.59109 | overlap 215685 CTGCTTTGGAAATTC TCAGGCA GTAT TGCCCGA TTTTTAACCCCTGTC panC 216586 - 215732 - | pantoate--beta-alanine ligase TERM 263 216311 - 216334 + g 74 -6.7 -4.24711 | TTCCTCAACGGCTGG CGCAAAGAC ATAATC GACTTTGCG TTTGTTCAGCTTTTC TERM 264 216480 - 216520 + g 76 -9.8 -3.78329 | overlap 216480 ACCAGCTTCATATGG C-CGTCGTGCAGGTTGCCCA TGG TGGG-AACCAGTGCGACGCG TTTACCTTCCTGACG TERM 265 216688 - 216676 - R 70 -9.1 -3.30124 | overlap 216678 CTGTAGGCCGGATAA GACGC GTC GCGTC GCCATCCGGCACGGT panB 217503 - 216712 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase folK 218103 - 217624 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 219518 - 218100 - | poly(A) polymerase I TERM 266 218485 - 218500 + g 80 -4.6 -5.02476 | overlap 218486 TCGTAATAGGCAAGG CCGCTC TCCT GAGCGA TTTTTTGCGCCATCT TERM 267 219252 - 219267 + g 73 -5.4 -4.56597 | TGCGTTGGTGGTCAC GTCGAA ATCC TTCGGC TTTTTACCGAGCAGG yadB 220555 - 219659 - | glutamyl-Q tRNA(Asp) synthetase TERM 268 220594 - 220577 - R 95 -12.7 -4.21772 | opp_overlap 220577 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT TERM 269 220577 - 220594 + r 79 -12.7 -2.80935 | opp_overlap 220577 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT dksA 221079 - 220624 - | DnaK transcriptional regulator DksA sfsA 221960 - 221256 - | sugar fermentation stimulation protein A ligT 222507 - 221977 - | 2'-5' RNA ligase TERM 270 222645 - 222635 - g 71 -4.6 -4.61231 | opp_overlap 222635 222635 TGACAGCCCTAAAAA CCGC GCC GCAG GTTTTGTTGTCCGCG TERM 271 223712 - 223751 + G 73 -6.3 -4.51224 | gap 1, overlap 223714 CATCGCTTTTCTGGC TGGACAGGCCGCCGGAAG TGAAT CTTCAGGCCGCCCG-CCG TTTATTATTGGTGTT hrpB 222535 - 225009 + | ATP-dependent RNA helicase HrpB TERM 272 225224 - 225244 + G 70 -9.7 -3.44527 | ACAAAAGGTGAGCCG TCGTCGGCA GCA TGACGACGA TTATGATGATGACTA TERM 273 225783 - 225793 + G 71 -8.2 -3.7829 | CAGCGTTTATTCGTC CCGC GCA GCGG TTTCCTGGATCTGCT TERM 274 226321 - 226353 + G 71 -8.2 -3.90744 | overlap 226336 226340 226344 ATGACATGCTGAGCG CGCGTCCGCTTGGC GTACA GCCGCGCGGCGGCG TTATTTCACCGCAGC TERM 275 226660 - 226682 + G 79 -12.7 -2.87881 | opp_overlap 226675, overlap 226647 CGCGCCGTTCCATCG GGTCGCTGG CGAAA CCGGCGACC TATCTGACCGCGTTA TERM 276 227277 - 227249 - g 77 -8.2 -4.17309 | gap 1, overlap 227243 227250 GACGACAAACAACAA TGTCGATACCTGG TTTG CC-GGTATCGACG GCAGCCAGGTGACTA TERM 277 227276 - 227250 - g 76 -11.7 -3.09301 | gap 1, overlap 227243 227249 ACGACAAACAACAAT GTCGATACCTGG TTTG CC-GGTATCGAC GGCAGCCAGGTGACT mrcB 225150 - 227672 + | penicillin-binding protein 1b TERM 278 230201 - 230222 + F 100 -13.7 -4.1466 | overlap 230202 TTTCTAATTTCTTTT TGGGCACGG CTTG CCGTGCCCG TTTTACAAGTTGGCT TERM 279 230202 - 230221 + F 93 -15 -3.08314 | overlap 230201 TTCTAATTTCTTTTT GGGCACGG CTTG CCGTGCCC GTTTTACAAGTTGGC fhuC 230241 - 231038 + | iron-hydroxamate transporter ATP-binding subunit TERM 280 231392 - 231374 - g 82 -11.6 -3.85698 | opp_overlap 231379 231380 231383 CCCTCGCCGGAGAAA CTGGCGCG GAT CGCGCCGG GGCGCGGGTTCGATT TERM 281 231751 - 231731 - g 71 -8.3 -3.91897 | opp_overlap 231734, overlap 231734 CTGGCGATGTATAAA GAAGCGGAT GTA ATCTGCTTC GATCACGGGAATAAC fhuD 231038 - 231928 + | iron-hydroxamate transporter substrate-binding subunit TERM 282 232013 - 231966 - g 89 -9.2 -4.56597 | opp_overlap 231966 231965 232001, overlap 232010 232011 TGGCGGCGCGAAAAA CGCCTTAACCGACCTACG GTTCGGGCGCTT TGTAGGCCGGATAAGGCG AAGCCGCCATCCGGC TERM 283 232337 - 232390 + G 83 -15.2 -2.74523 | overlap 232335 TTTGGGCGATTCCCG GCGCGCTGACCACGCAGTTTGCCG CCCTGA CGGGAGCCTGCATCGTCGGCGCGC TGGTGTTCGGCGTGG TERM 284 232602 - 232614 + G 74 -7.7 -4.09963 | GCAGTTGCTGGGCGG CGTGA TGC TCACG TTATTGTTGTTACGC TERM 285 232837 - 232855 + G 77 -7.3 -4.33785 | overlap 232822 GCGCGCCTGATGCTG GCGCCGC TCATT GGGGCGC TTATTTTATGGCTAT TERM 286 233402 - 233417 + G 86 -11.8 -3.85698 | opp_overlap 233401, overlap 233403 TGATTATTATGATAG CCGCCG GGCG CGGCGG TTTCTCGCCGCAACG fhuB 231925 - 233982 + | iron-hydroxamate transporter permease subunit TERM 287 234341 - 234357 + F 72 -8.7 -3.7829 | opp_overlap 234341 CTTTTTAAATATTAA GATGTGG ATG CCGCATC TTTAATGCATCTCGT stfA 234923 - 235483 + | putative fimbrial subunit TERM 288 235522 - 235490 - f 86 -11.3 -3.75629 | overlap 235492 TATCTGTAAGTGAAA TATCATCCTGCGGCA GTC TGCCGCAGGATAAGG CTCAAAATAAAAAAA TERM 289 235520 - 235492 - f 100 -18.3 -3.46068 | overlap 235490 TCTGTAAGTGAAATA TCATCCTGCGGCA GTC TGCCGCAGGATAA GGCTCAAAATAAAAA TERM 290 236062 - 236030 - f 70 -10 -3.04144 | gap 2, opp_overlap 236058, overlap 236032 236040 236042 GGCCTATCTGGAATA CAGCGATGAAGAGTGG GAT CCAC-CTTC-CCGCTG GGATGAAGGGATTCC TERM 291 236530 - 236540 + F 72 -8.2 -3.66356 | overlap 236492 ATGAGTCGCAAGTCC CGGC TGG GCCG TTTCGCATTCAGGAT TERM 292 237899 - 237870 - f 79 -4.3 -5.1861 | gap 1, opp_overlap 237897 CTCAGCAGTAAAAAA GCCATGGC-CAG TATCCGC CTGCGCGATGGC GGCACACCCCCCTTC stfD 238244 - 238996 + | putative periplasmic fimbrial chaperone stfE 239015 - 239527 + | putaive minor fimbrial subunit TERM 293 240074 - 240088 + G 71 -4.2 -4.63928 | overlap 240075 ATTGCCGGTCTCAGC GGCAGA TAA TCTGCA TTTTTCCGGTAGTCT stfG 240000 - 240530 + | putative minor fimbrial subunit; putative adhesin SPA0207 240530 - 241375 + | hypothetical protein TERM 294 241457 - 241430 - T 100 -9.9 -5.96521 | gap 2, opp_overlap 241429 241426 ATGAACCAAAAAAAA GCCGGGT--GGCG GCTT CGCCTTACCCGGC CTACGTTGTTTCTGG hemL 242763 - 241483 - | glutamate-1-semialdehyde aminotransferase TERM 295 241632 - 241622 - G 70 -6.8 -4.1711 | overlap 241593 ATCAGGTGGAAGAAA CGCT TAA AGCG TTCCACGTCACACGC TERM 296 243132 - 243157 + G 76 -3.3 -4.98531 | gap 1, opp_overlap 243120 243118, overlap 243121 243140 243141 ACATGCGCATTGGCG CGC-TGGTTC AGGTCGC GGACCATGCG TTTTTGCTTTGGCCG TERM 297 243168 - 243178 + G 77 -8.2 -4.13654 | ATGCGTTTTTGCTTT GGCC GCT GGCC TTTATCCTTTCGGCG yadQ 242933 - 244354 + | chloride channel protein TERM 298 244642 - 244628 - g 76 -5.6 -4.68994 | opp_overlap 244628 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGATCCGATG yadR 244391 - 244780 + | iron-sulfur cluster insertion protein ErpA yadS 245504 - 244881 - | hypothetical protein btuF 246341 - 245541 - | vitamin B12-transporter protein BtuF TERM 299 246145 - 246158 + g 70 -6.7 -4.18465 | AGATTCATTCCCTGC CAGGT AGAG ACCTG TTCTATTTTTTGCGC mtn 247032 - 246334 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 300 247076 - 247095 + H 71 -7.9 -3.85698 | GGGCATAGTTTATCA TGCGCTT ATGGGG AAGCGCA TTTCTCAGGCGGGGA TERM 301 247286 - 247271 - g 78 -2.4 -5.14563 | overlap 247272 GTTTGCAGCAAAAAA CGCAGG TTTT CCCGCT GGAGCGCAATGCCGC dgt 247117 - 248634 + | deoxyguanosinetriphosphate triphosphohydrolase TERM 302 250101 - 250054 - g 77 -3.5 -5.00884 | gap 2, overlap 250080 ATTGGCCTCAAAAAA GGCGATGTCATT-ATCGGC-GCT AACC AGCAGCCGGTGAAAAATATCGCC GAGCTGCGTAAGATT htrA 248764 - 250191 + | serine endoprotease TERM 303 250196 - 250230 + F 77 -7.3 -4.52589 | opp_overlap 250195 250220, overlap 250197 250197 TGATGCAGTAATCAC CT-TTGTCCCCCTTCCA TCA TGGAAGGGGG-CAACAC TTTTCTGTGAAACCC TERM 304 250197 - 250229 + F 77 -10.8 -3.31232 | opp_overlap 250195 250220, overlap 250196 250197 GATGCAGTAATCACC T-TTGTCCCCCTTCCA TCA TGGAAGGGGG-CAACA CTTTTCTGTGAAACC TERM 305 250197 - 250228 + F 78 -12.4 -2.58418 | gap 1, opp_overlap 250195 250220, overlap 250197 250196 GATGCAGTAATCACC TTTGTCCCCCTTCCA TCA TGGAAGGGGG-CAAC ACTTTTCTGTGAAAC yaeG 250344 - 251501 + | carbohydrate diacid transcriptional activator CdaR yaeH 251976 - 251590 - | hypothetical protein TERM 306 252323 - 252343 + G 95 -3.1 -5.86061 | TATACGGCCTGGCAA GCGCGCTGG TAT TTGGCCCGC TTTTTTTTCCTGGCG SPA0218 252223 - 253524 + | putative inner membrane protein TERM 307 253531 - 253549 + T 79 -8.1 -4.21275 | gap 1, opp_overlap 253531 253532, overlap 253531 TCGCCGTAATGCAAA G-GGGGGC TGTC GCCCCCGC TTTTCACTCGCTTAA TERM 308 253548 - 253531 - T 72 -8.3 -3.75153 | opp_overlap 253531 253531, overlap 253532 TCGCCGTAATGCAAA GGGGGGC TGTC GCCCCCG CTTTTCACTCGCTTA TERM 309 253547 - 253532 - T 77 -11.8 -2.84878 | opp_overlap 253531 253531, overlap 253531 CGCCGTAATGCAAAG GGGGGC TGTC GCCCCC GCTTTTCACTCGCTT dapD 254385 - 253561 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase glnD 257087 - 254415 - | PII uridylyl-transferase TERM 310 256409 - 256426 + g 74 -6.9 -4.3467 | ATGTATGGATATCGC GCAGGCC GCCG GGGCTGC TTTTAATATCCGGCT TERM 311 257137 - 257107 - R 84 -7.5 -4.7497 | gap 1, opp_overlap 257117 GCCACCCATTAAAAA GCCGGATGGTGGCG TGAA CGCCTT-ATCCGGC CTACGAAGTAGTACA map 257994 - 257200 - | methionine aminopeptidase TERM 312 257944 - 257954 + g 78 -2.4 -5.15381 | overlap 257941 GGCTGCCAGACGGCC CGCG ACG CGCA TTTTTTCGATGTCTT rpsB 258445 - 259170 + | 30S ribosomal protein S2 TERM 313 259163 - 259151 - f 73 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC CGAGTAATAAGGCTT TERM 314 259344 - 259364 + F 100 -11.1 -4.89729 | overlap 259342 TATCACGTTTGGTTA GGGGGCC TGTATAT GGCCCCC TTTTTCACTTTTATA TERM 315 259600 - 259584 - g 86 -6.5 -5.13521 | AAAGCAGCGAAAAAA GCAGGCA ACG TGGCTGC TGACGGCGTAATCAA TERM 316 259639 - 259624 - g 74 -4.6 -4.72729 | opp_overlap 259624 259625, overlap 259625 TAATCAAAACCAAAA TCGACG GCAA CGTCGC TTTCATTCTGGAAGT tsf 259428 - 260279 + | elongation factor Ts TERM 317 260289 - 260310 + F 100 -13.7 -4.10925 | overlap 260290 260292 260299 TCCTGATTTTCCTGA GGAGCCGCC TGAG GGCGGCTTC TTTTGGCGCCTCTCT TERM 318 260292 - 260307 + F 95 -11.8 -4.17762 | overlap 260289 260290 260299 TGATTTTCCTGAGGA GCCGCC TGAG GGCGGC TTCTTTTGGCGCCTC TERM 319 260359 - 260333 - f 76 -8.1 -4.07568 | gap 2, overlap 260336 GCCTCTCTTGTAAAA TCAGC-C-GACGC CTG GCGTCTGCGCTGA AATGCGACGTACAAT TERM 320 260354 - 260336 - f 73 -10.2 -3.08032 | overlap 260333 TCTCTTGTAAAATCA GCCGACGC CTG GCGTCTGC GCTGAAATGCGACGT pyrH 260424 - 261149 + | uridylate kinase frr 261296 - 261853 + | ribosome recycling factor TERM 321 261853 - 261833 - f 76 -8.3 -4.14627 | opp_overlap 261833 261834 261836, overlap 261834 261836 TTGGCAGATAAAGAA GCAGAACTG ATG CAGTTCTGA TTGATCTGTACGCAG TERM 322 261852 - 261834 - f 78 -11.8 -3.08294 | opp_overlap 261833 261834 261836, overlap 261833 261836 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 323 261834 - 261852 + F 76 -11.8 -2.58999 | opp_overlap 261834 261833 261836, overlap 261833 261836 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 324 261912 - 261961 + F 100 -10.7 -5.16151 | opp_overlap 261917 261918, overlap 261913 GCGGATGAGTGGTGT ACAAAGCGCCGCGCAAAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTGC TTTTTATTCCGTTTC TERM 325 261913 - 261960 + F 100 -14.2 -3.68064 | opp_overlap 261917 261918, overlap 261912 CGGATGAGTGGTGTA CAAAGCGCCGCGCAAAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTG CTTTTTATTCCGTTT TERM 326 261956 - 261917 - f 77 -9.2 -3.86346 | opp_overlap 261913 261912, overlap 261918 TGAGTGGTGTACAAA GCGCCGCGCAAAAGACAT TATC AGGTCTCCTGTGCGGCGT TTTGCTTTTTATTCC TERM 327 261955 - 261918 - f 79 -12.7 -2.91593 | opp_overlap 261913 261912, overlap 261917 GAGTGGTGTACAAAG CGCCGCGCAAAAGACAT TATC AGGTCTCCTGTGCGGCG TTTTGCTTTTTATTC dxr 261995 - 263191 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 328 263259 - 263270 + F 80 -5.8 -4.95854 | overlap 263251 ATATAGTCTGCGCCA CCTG ATCG CAGG TTTTTGGCTTTTTTC TERM 329 263296 - 263313 + F 100 -8.4 -5.28176 | TTTTCGGTCAGGTTA GCCGTG GTTTTA CACGGC TTTTTTGTGGATACA uppS 263504 - 264262 + | undecaprenyl pyrophosphate synthase cdsA 264275 - 265132 + | CDP-diglyceride synthase TERM 330 265433 - 265421 - g 74 -3.3 -4.89477 | opp_overlap 265430 CCTTCAATAACAAAA CGGTG GGC CAGCG TGCCGCAATTATTGC yaeL 265144 - 266496 + | zinc metallopeptidase TERM 331 267734 - 267764 + G 72 -11.8 -2.58822 | overlap 267732 267737 GTCGACACCGACACG CAGCGTGTTCCGGG TAG CCCGGATCAGGTTG ATGTTGTGTACAAGG TERM 332 267737 - 267761 + G 70 -9.9 -3.44443 | overlap 267734 267732 GACACCGACACGCAG CGTGTTCCGGG TAG CCCGGATCAGG TTGATGTTGTGTACA yaeT 266528 - 268939 + | outer membrane protein assembly factor YaeT TERM 333 269276 - 269264 - g 77 -7.7 -4.27584 | ATCTGCAATCTAAAA TGCAG CGT CTGCA ATCCATGAAAGCAGG TERM 334 269378 - 269353 - g 72 -3.9 -4.83169 | overlap 269371 269373 ACTTTCGCACAAAAA GCGCAGGCTTT TGAG AAAGATCGCGC TCGTCGTTCCAACGA TERM 335 269524 - 269496 - g 78 -11.8 -3.28924 | overlap 269481 269483 CACCGTTGCTTACAA CAGCAGCGATGT GAAAG ACATCACCGCTG ACGTACTGAAACAGG ompH 269062 - 269547 + | periplasmic chaperone TERM 336 269629 - 269604 - g 81 -13.3 -2.97245 | opp_overlap 269602, overlap 269599 GGATGCAGAATTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 269551 - 270576 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 337 270605 - 270641 + F 79 -9.4 -4.02005 | gap 1, overlap 270606 AGTTGCCATTCTTTT C-CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCGTG TTATTATTGCCTTTT TERM 338 270606 - 270639 + F 90 -13.1 -3.57992 | overlap 270605 GTTGCCATTCTTTTC CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCG TGTTATTATTGCCTT fabZ 270682 - 271137 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 339 271201 - 271224 + G 72 -3.8 -4.79752 | overlap 271205 GACGGCGCTGTAATT GGCGCTAATG CCCA CATTGGTCCC TTTTGTATTGTTGGG TERM 340 271566 - 271554 - g 70 -9.1 -3.61715 | TATCCTCGCCAACAA CGCCA CGC TGGCG GGGCACGTATCAGTC lpxA 271141 - 271929 + | UDP-N-acetylglucosamine acyltransferase TERM 341 272020 - 272038 + G 73 -5.9 -4.4017 | opp_overlap 272019 272020 272033 TTCGTGCGCTGAAAG CGCGCGT ACCCA ACGCCCG TTTTGTGGGCGTTGC TERM 342 272475 - 272465 - g 72 -2.4 -4.84359 | opp_overlap 272470 272471, overlap 272467 GGACCCGGATAAAAA TGCG GCG CGCG ACGTGCTGGGTATCC TERM 343 272968 - 272937 - g 71 -4.4 -4.66833 | gap 1, overlap 272938 TGCGAACCGCAAAAA CTCGCC-GAAGCG CTGTTGC CGCTACTGGCGAA CGGTAAAACCAGCCA lpxB 271929 - 273077 + | lipid-A-disaccharide synthase rnhB 273074 - 273670 + | ribonuclease HII dnaE 273694 - 277176 + | DNA polymerase III subunit alpha TERM 344 277342 - 277328 - g 76 -2.8 -5.00616 | overlap 277340 GCCTGCGCGAAAAAA GCGT AGAACTG ACGC GCAAAATCTTCGCCG accA 277189 - 278148 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 345 278171 - 278191 + F 100 -16.9 -5.40072 | CCTCATTTTTCCCAG GAGGCCGGA TAA TCCGGCCTC TTTTTTTGGACGAGG TERM 346 278362 - 278343 - g 84 -6.4 -5.0538 | gap 1, overlap 278345 278346 TGGGATTGCAAAAAA CACTGGCGC TCA GCGCC-GTA GCGGCAGGGATCATG TERM 347 278360 - 278345 - g 70 -6.8 -4.15748 | gap 1, overlap 278343 278346 GGATTGCAAAAAACA CTGGCGC TCA GCGCC-G TAGCGGCAGGGATCA TERM 348 278455 - 278440 - g 71 -10.4 -3.25015 | GCCAATGACCATTAA CGCCAG CGAT CTGGCG GTGAAAGAGAAAGCG SPA0240 278327 - 280090 + | putative secreted chitinase TERM 349 280100 - 280126 + F 100 -15.2 -3.79849 | opp_overlap 280100 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 350 280126 - 280100 - f 90 -10.8 -4.34263 | opp_overlap 280100 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 351 280309 - 280331 + G 71 -4.9 -4.66609 | gap 1, opp_overlap 280309 280313, overlap 280313 GAAGTTTATTGAACA TAAC-CCGCG CATC TGCGGCGTTA TTTTTGACTGGGATG TERM 352 280653 - 280663 + G 78 -6.8 -4.58242 | opp_overlap 280647 280649 ATCAGAAAAGCCCGC CAGG CTG CCTG TTTTATGACTTTTTT TERM 353 280954 - 280975 + G 72 -12.3 -2.58427 | gap 1, overlap 280953 280955 GCCTCTCTGGTTGAA GCCGACGCGC AAT GCGC-TCGGC ATTCTCGGCGGTATT TERM 354 281887 - 281901 + G 77 -4.2 -4.84761 | overlap 281876 GTTGCCGGATCTGTA TGCGGA AGA TCCGGA TTTTTATCGCAATAT TERM 355 282172 - 282186 + G 79 -7.8 -4.49311 | opp_overlap 282171 GATCACGCAACAGAG TCGGGC CGT GCTCGA TTTTCTGCTGATGCT ldcC 280166 - 282307 + | lysine decarboxylase yaeR 282363 - 282752 + | hypothetical protein TERM 356 283413 - 283428 + G 71 -6 -4.25283 | overlap 283414 CGCTTCCGCTCTTAC AGCGGC GCTG GCCGCA TTTTCCTGCGGCGGT TERM 357 283987 - 283956 - g 75 -3.7 -4.94058 | gap 2, opp_overlap 283985, overlap 283958 GTAAGTTAAAGAAAA TCTGGCAGGAGCAGG GGAT CCCGC-CCTGGC-GA CGAGATACCACGCCG tilS 282815 - 284107 + | tRNA(Ile)-lysidine synthetase TERM 358 284117 - 284160 + T 73 -11 -2.71011 | opp_overlap 284149 284159 GCCTGATGGCGCTGC GCTTATCAGGCCTGCGTATC GCAT GGAACGTAGGCCGGATAAGG TGCTTGCACCACCAT rof 284445 - 284191 - | Rho-binding antiterminator yaeP 284656 - 284438 - | hypothetical protein TERM 359 284474 - 284489 + g 86 -10.4 -4.18018 | CACCAGTAAGTTCGC GGCAGC ATAA GCTGCC TTTTCCCTGACCGAC TERM 360 285131 - 285118 - g 81 -8.1 -4.24342 | CGCCGTATTAAGAAA GCCTG TACT CAGGC GAGCGACGTCGCGCT yaeQ 284836 - 285381 + | hypothetical protein yaeJ 285378 - 285800 + | hypothetical protein cutF 285832 - 286533 + | lipoprotein involved with copper homeostasis and adhesion TERM 361 286539 - 286559 + T 100 -16.9 -3.74077 | opp_overlap 286539 CACTCACTAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG TERM 362 286559 - 286539 - T 100 -16.9 -4.72497 | opp_overlap 286539 CACTCACTAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG proS 288325 - 286607 - | prolyl-tRNA synthetase TERM 363 286644 - 286663 + g 71 -4.2 -4.58395 | opp_overlap 286636 286644 286660 AGATAATCAACGATA TCGCCGGT TTTA ATCAGCGA TTTTTCACCGCTACG TERM 364 287582 - 287598 + g 74 -10.8 -3.53444 | overlap 287586 AGTCATTTCCTGCGT CGCCGC TGCGC GCGGCG TTTGCGGCGCGATAG TERM 365 288373 - 288355 - R 83 -13.2 -3.13343 | AGTTGAACGATCGAA CAGGCTCA ATG TGAGCCTG ATACAAAAAAAGTGA yaeB 289143 - 288436 - | hypothetical protein TERM 366 288914 - 288882 - G 91 -9.8 -4.56775 | gap 1, overlap 288908 AGCGCGTGGCAAAAA CGCCCATTC-TGGCG TTAC CGCCAAGACGGGGCG GGCGAACTGTTGGCC rcsF 289544 - 289140 - | outer membrane lipoprotein TERM 367 289628 - 289605 - R 88 -14.6 -3.01125 | opp_overlap 289603, overlap 289602 289608 AGCTTGCATAAATGA CAAGACGGGC AATA GCCCGTCCTG AATAATATTACAGAT TERM 368 289625 - 289608 - R 88 -12.7 -3.64915 | opp_overlap 289603, overlap 289605 289602 TTGCATAAATGACAA GACGGGC AATA GCCCGTC CTGAATAATATTACA metQ 290478 - 289663 - | DL-methionine transporter substrate-binding subunit yaeE 291155 - 290517 - | DL-methionine transporter permease subunit TERM 369 290876 - 290866 - G 83 -8.2 -4.38154 | overlap 290838 ATACGGGCGATAAAA GGCG CGG CGCC GACGGTCAGCGGTAC metN 292194 - 291163 - | DL-methionine transporter ATP-binding subunit TERM 370 291484 - 291494 + g 77 -8.2 -4.13767 | CTGAATAAACTTCTG CGCC AGC GGCG TTTTAGGATGCGAGA yaeD 292384 - 292950 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 371 293108 - 293094 - f 76 -4.2 -5.0916 | opp_overlap 293094, overlap 293095 293102 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 372 293140 - 293128 - f 71 -7.7 -4.00532 | overlap 293138 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACGATG TERM 373 295254 - 295217 - f 77 -3.4 -5.14563 | opp_overlap 295219 295247, overlap 295219 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 374 295317 - 295293 - f 71 -8 -3.93061 | gap 1, opp_overlap 295293 295300, overlap 295297 295303 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 375 295871 - 295859 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 376 298495 - 298544 + F 100 -22.5 -2.7035 | opp_overlap 298499 298504, overlap 298499 298504 298509 GGAACTGCCAGGCAT CAAATAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTATCTG TGGTCTGTCGGTGAG TERM 377 298540 - 298499 - f 100 -17.5 -3.76224 | opp_overlap 298495 298499 298504 298509, overlap 298504 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTGGTCTGTCGG TERM 378 298499 - 298540 + F 100 -21.9 -2.99545 | opp_overlap 298499 298504, overlap 298495 298504 298509 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTGGTCTGTCGG TERM 379 298535 - 298504 - f 100 -13 -4.9448 | opp_overlap 298504 298499 298495 298509, overlap 298499 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTGGTCT TERM 380 298504 - 298535 + F 100 -17.4 -4.63586 | opp_overlap 298499 298504, overlap 298499 298495 298509 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTGGTCT TERM 381 298509 - 298530 + F 100 -15.9 -5.24647 | opp_overlap 298504 298499, overlap 298504 298499 298495 TCAAATAAAACGAAG GGCCCTGTC GGAA GACAGGGCC TTTTGTTTTATCTGT TERM 382 298595 - 298581 - f 71 -7.8 -3.99324 | opp_overlap 298581 CCTGAGGAGGAGAAA TCCGCC GGG AGCGGA TTTGAACGTTGCGCA TERM 383 298667 - 298708 + F 100 -16.7 -2.82015 | opp_overlap 298670 298675 298678, overlap 298675 298678 CTGCCAGGCATCAGA CAAGTGAAGAAGCCCGTTC TGAC GGACGGGCTTCTTTGCGTG TGTGGTAACTGTAAA TERM 384 298705 - 298670 - f 79 -10.4 -3.55447 | opp_overlap 298667 298675 298678, overlap 298675 298678 CCAGGCATCAGACAA GTGAAGAAGCCCGTTC TGAC GGACGGGCTTCTTTGC GTGTGTGGTAACTGT TERM 385 298700 - 298675 - f 83 -13.3 -3.27164 | opp_overlap 298667 298675 298678, overlap 298670 298678 CATCAGACAAGTGAA GAAGCCCGTTC TGAC GGACGGGCTTC TTTGCGTGTGTGGTA TERM 386 298675 - 298700 + F 100 -15.5 -3.74792 | opp_overlap 298675 298670 298678, overlap 298667 298678 CATCAGACAAGTGAA GAAGCCCGTTC TGAC GGACGGGCTTC TTTGCGTGTGTGGTA TERM 387 298697 - 298678 - f 76 -9.2 -3.76837 | opp_overlap 298675 298667 298678, overlap 298675 298670 CAGACAAGTGAAGAA GCCCGTTC TGAC GGACGGGC TTCTTTGCGTGTGTG TERM 388 298678 - 298697 + F 87 -11.4 -3.99985 | opp_overlap 298678 298675 298670, overlap 298675 298667 CAGACAAGTGAAGAA GCCCGTTC TGAC GGACGGGC TTCTTTGCGTGTGTG TERM 389 298784 - 298740 - f 79 -11.4 -3.30243 | gap 1, opp_overlap 298740 298739, overlap 298730 298727 ATGTAGGCCTGATAA GCGCAGC-GCCATCAGGCAAC CTGC ACCGCCGGATGGCAGCTTCGC CTTATCCGGCCTACA SPA0262 298917 - 299372 + | hypothetical protein TERM 390 299456 - 299444 - f 72 -2.6 -5.08255 | overlap 299455 ATCTCCAAAATAAAA GGCC GATTA AGCC TGGCAACAAGGAGAA TERM 391 299675 - 299693 + G 90 -5.8 -5.14563 | opp_overlap 299672, overlap 299672 299677 AGCTTTTGCAAACGG CAGGCGTC TTT GCCGCCGG TTTTTTAATGCGGCC kgtP 299476 - 300777 + | alpha-ketoglutarate transporter yfiM 301097 - 300774 - | hypothetical protein TERM 392 301135 - 301119 - R 89 -9.4 -4.66938 | opp_overlap 301118 ACTCCTAAGAGAAAA CCCCGT ACAGG ACGGGG CTTCGATTACAGGAT pssA 302497 - 301142 - | phosphatidylserine synthase TERM 393 302356 - 302367 + g 71 -5.8 -4.3739 | opp_overlap 302349, overlap 302349 302359 TACAAATACGCTGCG TCGC GCTG GCGA TTTTCTCCAGCAGTG yfiQ 305272 - 302612 - | putative acyl-CoA synthetase TERM 394 304551 - 304569 + g 81 -8 -4.25104 | TTAAGTAAACGCTGG GCTGCCGG GCT TCGGCCGC TTTTAATCACCAGAA yfiP 306006 - 305326 - | hypothetical protein TERM 395 305867 - 305846 - G 76 -2.9 -5.01497 | overlap 305840 305835 ATGACCAGACAAAAA CGGCTTTTC GCCT GAGAAGGCG TTAACGTATCACACA TERM 396 306072 - 306052 - R 100 -14.7 -4.16943 | opp_overlap 306048 306066, overlap 306065 TGGCAGAGGTGAAAA CGGGGCACA AGA TGCGCCCCG TGGCGTTTACAGCGC yfiG 306498 - 306079 - | thioredoxin 2 TERM 397 306525 - 306545 + H 87 -10.4 -4.13591 | opp_overlap 306515 306525 GAATACGTCGGAAGA CGTCCCGC TACGC GCGGGATG TTTCTATAATGTTAC TERM 398 306943 - 306905 - g 93 -13.1 -4.00934 | gap 1 ACCGTAAACATGAAA CTTCGCCGTGGCGCACCG TGTC CCGCGCGCCA-GGCGATG AAACGCCTGAGAAAG TERM 399 307270 - 307248 - g 100 -10.6 -4.72272 | TTTCCTGATTAAAAA GCGTAACGGT ACG ACCGTTAAGC AATGGGTAAAGCAGG yfiF 306709 - 307746 + | putative methyltransferase TERM 400 307827 - 307814 - T 75 -9.5 -3.48276 | opp_overlap 307799 307814 307813 CGCCCGGTCAGACAA GGCGC TTTC GCGCC GTTATCCGGGCGATA TERM 401 307858 - 307846 - T 74 -6.9 -4.37092 | overlap 307847 ATCCGGGCGATAAAA CGGCG AGC CGCCA ACGTTATTCACTCTC ung 308551 - 307862 - | uracil-DNA glycosylase TERM 402 307978 - 307964 - G 91 -7.8 -5.1287 | GTTACAGCCAAAAAA TCCGCG GTG CGCAGA GAGTGGCGAGGGATG yfiD 308870 - 309253 + | autonomous glycyl radical cofactor GrcA TERM 403 309298 - 309274 - T 100 -14.3 -3.94877 | opp_overlap 309274 ATCCGGTAATAACAA GCGGAAGAGGC CGG GCCTTTTCCGC TTTTGTTTTATTTGG TERM 404 309274 - 309298 + T 100 -16.5 -5.34857 | opp_overlap 309274 ATCCGGTAATAACAA GCGGAAGAGGC CGG GCCTTTTCCGC TTTTGTTTTATTTGG TERM 405 309338 - 309326 - T 77 -3.3 -5.14563 | overlap 309327 TGGGTCAGTAAAAAA TCCGC ACC GCGCA GTACACCAGCAGTAA yfiK 309902 - 309315 - | neutral amino-acid efflux protein yfiE 309960 - 310904 + | LysR family transcriptional regulator TERM 406 310915 - 310894 - T 100 -14.5 -5.80817 | opp_overlap 310894 TGGAAGATAAAAAAA TGCCGGGTT AACG AACCCGGCA TTATTATTACTCTTC TERM 407 310894 - 310915 + T 100 -14.5 -4.03167 | opp_overlap 310894 TGGAAGATAAAAAAA TGCCGGGTT AACG AACCCGGCA TTATTATTACTCTTC srmB 312256 - 310922 - | ATP-dependent RNA helicase SrmB TERM 408 312074 - 312093 + g 80 -9.2 -4.11692 | CAGGTGCTGCAACGC CGGCAGCA GATA TGCCGCCG TTTTACCGGTGCCTG TERM 409 312350 - 312363 + H 100 -9.5 -5.03145 | GGTATTGTTTTCACC CGGCG CTGT CGCCG TTTTTTGCAAGGTTG TERM 410 313012 - 313030 + G 75 -11.7 -2.90496 | overlap 313007 GGTTTTGCTCGCATT CTCCCCG CAAGC CGGGGAG TGCTTTAGCGACAGA yfiC 312386 - 313123 + | hypothetical protein nadB 314730 - 313108 - | L-aspartate oxidase TERM 411 313213 - 313182 - G 72 -12.4 -2.59431 | gap 1, opp_overlap 313192, overlap 313178 GTTGCGGATAATCCA GCGTAAAGTGCAGCC CCC GGCT-CTCTTTACGC ATCATCGCGCAACGC TERM 412 313862 - 313881 + g 76 -12.1 -3.15544 | opp_overlap 313844 313857 313859 313860 CGGGCGACAATATCG CGCGGCG CCAGCT CGCCGCG TTCGTCAACGTCCGG TERM 413 314583 - 314563 - G 70 -8.9 -3.72576 | overlap 314566 314576 GTCGGTTTCATCAAA CACGGCGGC AAT ACCGCCCTG CGCATAAAACGTGGA TERM 414 315057 - 315037 - H 73 -2.5 -5.1502 | overlap 315039 ACAAACAAAAACAAA TGCGTAACG GAA CTTTACGAA ACATAGACACTCTAA rpoE 315155 - 315730 + | RNA polymerase sigma factor RpoE TERM 415 316061 - 316041 - g 76 -3.2 -5.00616 | gap 1, overlap 316042 CCGTTCTGGAAAAAA GTGCGTCCG TGGG CGG-CGCAG CTTACCCAAATGGGC rseA 315762 - 316412 + | anti-RNA polymerase sigma factor SigE TERM 416 316471 - 316498 + G 83 -11.9 -3.61715 | opp_overlap 316471 GTTCTTCTCAGTAAA CGCCTCGGCCG ACCCTG CGTCCGGGGCG TTATTGCAGCAGATG TERM 417 316498 - 316471 - g 74 -9.7 -3.72576 | opp_overlap 316471 GTTCTTCTCAGTAAA CGCCTCGGCCG ACCCTG CGTCCGGGGCG TTATTGCAGCAGATG rseB 316412 - 317368 + | periplasmic negative regulator of sigmaE TERM 418 317621 - 317631 + G 73 -5.4 -4.55295 | overlap 317616 TCTATATGTCGCCTT TAGC GGG GCTA TTTCTTTGTGCGGCG rseC 317365 - 317844 + | SoxR reducing system protein RseC TERM 419 317853 - 317878 + F 76 -8.9 -3.79906 | opp_overlap 317846 CCAGTAAACGTTTTG CCCAACGGTGC ACCT GCCGCGTTGGG TTGTTGTCCCGATAA TERM 420 319799 - 319785 - g 85 -2.1 -5.45652 | AGTCGTAAGAAAAAA CTGCT GCAGA AACAG AAAGAAGGTAAGAAA lepA 318096 - 319895 + | GTP-binding protein LepA lepB 319912 - 320886 + | lsignal peptidase I TERM 421 320939 - 320901 - f 75 -11.1 -2.96873 | gap 1, opp_overlap 320904, overlap 320898 ACTGTGACGAAATGA TCGTTCACGCTGCCGTCT TTTT AG-CGGCAGCGTGAATTA TTTCCTGGATAAATT TERM 422 320904 - 320936 + F 100 -17.2 -4.015 | gap 1, opp_overlap 320901 320898 GTGACGAAATGATCG TTCACGCTGCCGTCT TTTT AG-CGGCAGCGTGAA TTATTTCCTGGATAA rnc 321160 - 321840 + | ribonuclease III era 321837 - 322742 + | GTP-binding protein Era TERM 423 323441 - 323424 - g 78 -6.9 -4.66264 | opp_overlap 323423 323422 GAAAACCGTTAAAAA GCCGGGA GCTG TTCCGGC AATTTATGCCCAAAC recO 322754 - 323482 + | DNA repair protein RecO TERM 424 324026 - 324004 - g 71 -6.2 -4.28254 | overlap 324006 GCGGAACAGGCAAAA GAGCTGGC GCGTATT GCCAGCGC CGCGACCCTGGCGGC pdxJ 323494 - 324225 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 425 324349 - 324367 + G 74 -6.6 -4.36914 | GGGCTATCTGGGAGA CGCATCAG CAG CCGGTGCG TTTTCTCGCCAAGCG acpS 324225 - 324605 + | 4'-phosphopantetheinyl transferase yfhL 324977 - 324717 - | putative ferredoxin SPA0290 325941 - 325015 - | putative transcriptional regulator TERM 426 325722 - 325764 + g 75 -3.7 -4.85545 | opp_overlap 325722 325725, overlap 325707 325705 325723 325725 CTGCATTTTTTAAAT CCAG-CATTATTTTGTTAGCG TGT CGTTG-CAAAATAATGCCTGC TTTTGTTAATTTAAT SPA0291 326055 - 327251 + | putative transmembrane transport protein SPA0292 327273 - 328190 + | 2-dehydropantoate 2-reductase TERM 427 328197 - 328225 + T 100 -15.4 -4.27192 | opp_overlap 328179 328193 GCGCAATAAACTTGA TGGCTCTTCTGC ATGAG GCGGAAGAGCCA TTTTCATACCAGTTT yfhH 329077 - 328229 - | putative DNA-binding transcriptional regulator murQ 329193 - 330086 + | N-acetylmuramic acid-6-phosphate etherase SPA0295 330097 - 331458 + | putative PTS system IIBC component TERM 428 331478 - 331488 + F 76 -2.4 -5.38497 | overlap 331471 331469 331468 TGGTCAGCCACGAGC GTCG TGT CGTC TTTTTTGATTTGGAT TERM 429 332498 - 332486 - g 95 -10.5 -4.65895 | opp_overlap 332491 CGCGCGATGCAAAAA CCGGC GCG GCCGG ATCGCTAATTGATGT yfhC 332122 - 332673 + | tRNA-specific adenosine deaminase yfhD 334268 - 332724 - | putative transglycosylase TERM 430 332995 - 333005 + g 70 -3.2 -4.7629 | CCGTAGGTTAGCTTA CTGT AAT ACGG TTTTTGGCTTAATAG TERM 431 334249 - 334259 + g 78 -2.6 -5.1848 | opp_overlap 334249 CCGATGAACAGATAA TTAA TCT TTAA TTTTTTCAATTAGTT SPA0299 334499 - 334269 - | putative periplasmic protein purL 334524 - 338411 + | phosphoribosylformylglycinamidine synthase TERM 432 338431 - 338449 + F 100 -11.7 -5.24129 | opp_overlap 338431 CCCGATAGCCATTAA GCCCCTC TTCAC GAGGGGC TTTTTTGTAGACGGC TERM 433 338449 - 338431 - f 79 -11.7 -3.20382 | opp_overlap 338431 CCCGATAGCCATTAA GCCCCTC TTCAC GAGGGGC TTTTTTGTAGACGGC TERM 434 338605 - 338586 - f 71 -7.8 -3.92324 | overlap 338587 338598 TGCCGCAAGATTAAA GTGTCGGG AAAT CCCGACAT GAGTGGGGGATAGGT TERM 435 338604 - 338587 - f 75 -11.3 -2.95073 | overlap 338586 338598 GCCGCAAGATTAAAG TGTCGGG AAAT CCCGACA TGAGTGGGGGATAGG TERM 436 338972 - 339002 + F 100 -17 -2.89742 | opp_overlap 338975 338979, overlap 338975 338979 CACCGCCTTATTCCA TAACAAAGCCGGGT TTA GCCCGGCTTTGTTG TATCTGGCGCTTCCC TERM 437 338999 - 338975 - f 100 -15.8 -3.32844 | opp_overlap 338972 338975 338979, overlap 338979 CGCCTTATTCCATAA CAAAGCCGGG TTTAG CCCGGCTTTG TTGTATCTGGCGCTT TERM 438 338975 - 338999 + F 100 -16.5 -3.5947 | opp_overlap 338975 338979, overlap 338972 338979 CGCCTTATTCCATAA CAAAGCCGGGT TTA GCCCGGCTTTG TTGTATCTGGCGCTT TERM 439 338995 - 338979 - f 90 -10.8 -4.32177 | opp_overlap 338975 338972 338979, overlap 338975 TTATTCCATAACAAA GCCGGG TTTAG CCCGGC TTTGTTGTATCTGGC TERM 440 338979 - 338995 + F 95 -11.5 -4.42974 | opp_overlap 338979 338975, overlap 338975 338972 TTATTCCATAACAAA GCCGGGT TTA GCCCGGC TTTGTTGTATCTGGC TERM 441 339103 - 339113 + F 75 -3.2 -5.19212 | TCTTTACGACAATTG GTCA TGC TGGC TTTTTTGCTGATCCT yfhK 339106 - 340491 + | putative sensor kinase protein TERM 442 340511 - 340523 + G 77 -7.7 -4.2558 | AATTTAAGCCTGGTG CGTGT GTC ACACG TTTTCGTCCAAACTA TERM 443 340895 - 340872 - g 73 -5.2 -4.65895 | gap 1, overlap 340873 340875 TGGCGGATGCAAAAA TTACGCCGCCG GAG CGGCG-CGCCA TAGTGACCCGTCTGG TERM 444 340890 - 340875 - g 78 -11.8 -3.26405 | overlap 340873 340872 CGGATGCAAAAATTA CGCCGC CGGA GCGGCG CGCCATAGTGACCCG yfhG 340493 - 341257 + | hypothetical protein yfhA 341254 - 342591 + | putative transcriptional regulator glnB 342668 - 343006 + | nitrogen regulatory protein P-II 1 yjdL 344515 - 343055 - | putative transmembrane transport protein TERM 445 344532 - 344570 + r 76 -8.3 -4.14543 | gap 1, opp_overlap 344541, overlap 344529 344541 AAGTCTCCTTGCTGC GTGAAAAAAGGGAAGTGG CAAG CCACTTCCCTTTGGT-AC TTATTTCGTATTTTC TERM 446 344541 - 344562 + r 100 -14.5 -3.90738 | opp_overlap 344541, overlap 344532 344529 TGCTGCGTGAAAAAA GGGAAGTGG CAAG CCACTTCCC TTTGGTACTTATTTC TERM 447 344562 - 344541 - R 100 -14.5 -5.00616 | opp_overlap 344541 344532 344529 TGCTGCGTGAAAAAA GGGAAGTGG CAAG CCACTTCCC TTTGGTACTTATTTC cadA 346715 - 344571 - | lysine decarboxylase cadB 348129 - 346798 - | lysine/cadaverine antiporter TERM 448 347928 - 347938 + g 77 -4.6 -4.8622 | opp_overlap 347915, overlap 347914 347913 AAGCGATAGGGCCAC CCTG TTG CGGG TTTTTGGTTGCCAGC TERM 449 348381 - 348420 + r 78 -6.6 -4.57569 | opp_overlap 348381 348419 TTTCTTTGCGATGAA TATGTTGCCAAAATTAAC ATAA GCTATTTTTTGCAACATA TTTTTCACAAAATAA TERM 450 348466 - 348433 - R 86 -9.1 -4.38154 | opp_overlap 348433 348438, overlap 348419 348438 ATATTTTTCACAAAA TAAAAGCGAAAAATT TAAT ATCTTTTCGCTTTTA TTTGTCATGGTTCAG TERM 451 348433 - 348466 + r 73 -7.8 -4.02022 | gap 1, opp_overlap 348419 348433 348438, overlap 348438 ATATTTTTCACAAAA TAAAAGCGAAAA-AT TTAAT ATCTTTTCGCTTTTA TTTGTCATGGTTCAG TERM 452 348438 - 348461 + r 74 -3.3 -5.02323 | gap 1, opp_overlap 348433 348438, overlap 348433 TTTCACAAAATAAAA GCGAAAA-AT TTAAT ATCTTTTCGC TTTTATTTGTCATGG TERM 453 348461 - 348438 - R 79 -4.6 -5.18371 | opp_overlap 348438 348433, overlap 348433 TTTCACAAAATAAAA GCGAAAAATT TAAT ATCTTTTCGC TTTTATTTGTCATGG TERM 454 349023 - 349012 - R 71 -3.6 -4.82901 | opp_overlap 349020, overlap 348992 CGCGCCTCATAAAAA CGCA TCAG CGCG GTATTTTGCGGCGTT TERM 455 349552 - 349566 + r 82 -7 -4.7657 | opp_overlap 349552, overlap 349545 ACCCACGTCCAGAAA GCGGCG ATA CGCGGC TTTTTCGCCTTTTTA TERM 456 350191 - 350164 - R 74 -6.9 -4.2679 | opp_overlap 350164 350189 GAACGGGGAGGAAAA CGGGCGTTCGC CTTAAC GATAACGCCCG TTTTTTCAGCGGATT TERM 457 350164 - 350191 + r 85 -6.9 -5.01732 | opp_overlap 350164, overlap 350189 GAACGGGGAGGAAAA CGGGCGTTCGC CTTAAC GATAACGCCCG TTTTTTCAGCGGATT TERM 458 350240 - 350254 + r 72 -5 -4.56133 | TTATGCGGGCCGAAG CATTCG TAA TGAATG TTTTCGTTATTCACG hmpA 351405 - 350215 - | nitric oxide dioxygenase glyA 351730 - 352983 + | serine hydroxymethyltransferase TERM 459 353048 - 353086 + F 93 -12.5 -3.69621 | gap 1, opp_overlap 353048 353049, overlap 353048 ACTTATGCGCCATAA CG-TGACGCCGCCGGA AGTCATTA TCCGGCGGCGTTGCCG TTTGAACTTCTCCCT TERM 460 353048 - 353085 + F 79 -12.7 -2.81291 | opp_overlap 353048 353049, overlap 353048 ACTTATGCGCCATAA CGTGACGCCGCCGGA AGTCATTA TCCGGCGGCGTTGCC GTTTGAACTTCTCCC TERM 461 353084 - 353049 - f 76 -11.8 -2.57931 | opp_overlap 353048 353048, overlap 353048 CTTATGCGCCATAAC GTGACGCCGCCGGA AGTCATTA TCCGGCGGCGTTGC CGTTTGAACTTCTCC TERM 462 353973 - 353955 - g 70 -3 -4.72272 | TGCCCTGAGTAAAAA GCTATTCC GCC GGTTTAGC GCCCGCGACTTGCTG hcaT 353179 - 354318 + | putative 3-phenylpropionic acid transporter csiE 355590 - 354313 - | stationary phase inducible protein CsiE TERM 463 354441 - 354453 + g 71 -4.7 -4.58283 | opp_overlap 354429 TCAGCGCTACGCCGC GCGGG CAT CCCTC TTTTTGAAACGCTTG TERM 464 354876 - 354859 - G 74 -10.5 -3.53012 | CCCTTTTTCTCGAAA GCGCAGC ACCA GCCGCGC CACCTCCAGTCGCAG TERM 465 355230 - 355243 + g 74 -9.5 -3.65832 | overlap 355229 355239 CATCATACAGCGGAC GCGCG ATAC CGCGC TGTTTTAGCGCGTTT TERM 466 355239 - 355255 + g 100 -10.1 -5.00616 | overlap 355230 355229 GCGGACGCGCGATAC CGCGCTG TTT TAGCGCG TTTTTTAAGGCCGGG SPA0314 355716 - 356354 + | hypothetical protein SPA0315 356345 - 357331 + | putative inner membrane protein asrC 358345 - 357332 - | anaerobic sulfite reductase subunit C TERM 467 357596 - 357608 + g 93 -9.1 -4.77438 | overlap 357593 357592 GAGGAAGAGCTTGCC GACGC GCG GCGTC TTTTTACTGGTGCGT asrB 359174 - 358356 - | anaerobic sulfite reductase subunit B TERM 468 359123 - 359147 + g 74 -8.6 -3.96148 | gap 1 TGAGGATGCGGTACG CCGCAG-GCAG CAAA CTGTGCTGCGG TTTATCATGACAGGA asrA 360221 - 359178 - | anaerobic sulfite reductase subunit A TERM 469 359339 - 359363 + g 71 -4.2 -4.56597 | gap 1, overlap 359341 TGACCTTATGCAGGG CGCGGT-AGCG CAGA CGCTCGCCGGG TTTTTCGCGAAAACC TERM 470 360145 - 360121 - G 95 -11.3 -4.57569 | TCAGTGTCGGAAAAA CGTCCGCCGCG AAA CTCTGCGGACG GGGCAAACACGCGCC SPA0319 361281 - 360403 - | hypothetical protein TERM 471 361042 - 361054 + g 70 -6.9 -4.09685 | opp_overlap 361041 361039 361038 ATGGACATGAATCAC CGTCG CGA CGGCG TTTTCCGGCCTGCCG TERM 472 361418 - 361393 - R 83 -14.1 -2.74784 | gap 1, overlap 361390 361389 ACGCCTGAAAAGGCA CGGCGGAT-GAG TGG CTCCATCCGCCG AAGAGACTTAGCGCT suhB 362229 - 361426 - | inositol monophosphatase TERM 473 362211 - 362183 - G 72 -12.3 -2.69964 | overlap 362180 TTGGCAATTACATTA CCCGCCTTGCGCG CTG CGCGCACGGCGAT GGTCAGCATCGGATG SPA0321 362348 - 363079 + | putative RNA methyltransferase TERM 474 363234 - 363222 - f 91 -6.2 -5.55769 | TTTTACAATAAAAAA CCCC GGGCA GGGG CGAGTTTGAGGTTAA yfhP 363257 - 363751 + | DNA-binding transcriptional regulator IscR nifS 363932 - 365146 + | cysteine desulfurase nifU 365174 - 365560 + | scaffold protein iscA 365589 - 365912 + | iron-sulfur cluster assembly protein TERM 475 366004 - 365971 - f 70 -9.5 -3.09933 | CGGCAAGCGAGTGAA TCCCCAGACGCTTAC TTGA GTAAGTGACTGGGGG AACCCGCGCAGACAA TERM 476 366051 - 366077 + F 79 -8.7 -4.30719 | gap 1, opp_overlap 366051 AGTAAGAAGGTATAA CCCCAC-CGTGG TCGC CTGCGTGTGGGG TTTGTTCTGACAGGC TERM 477 366367 - 366378 + G 71 -7.2 -3.96148 | opp_overlap 366362 GAGCAGCATACGGTA CGCG ACAC CGCG TTTCTGATGGAACAA TERM 478 366540 - 366522 - g 100 -16 -3.33315 | GGAACAGTTGGACAA CGCCGCGT GGG ACGCGGCG GCGGATACGGTGCGC hscB 366109 - 366624 + | co-chaperone HscB hscA 366637 - 368487 + | chaperone protein HscA fdx 368489 - 368824 + | ferredoxin yfhJ 368836 - 369036 + | hypothetical protein TERM 479 369046 - 369067 + F 100 -15.1 -3.78775 | opp_overlap 369046 GAGTAAGTCAAATAA CGGGCTGCC CTAC GGCGGCCCG TTTGCTAATAAGGAA TERM 480 369067 - 369046 - f 95 -12.9 -4.02051 | opp_overlap 369046 GAGTAAGTCAAATAA CGGGCTGCC CTAC GGCGGCCCG TTTGCTAATAAGGAA TERM 481 369463 - 369434 - g 71 -10.7 -3.24747 | opp_overlap 369459, overlap 369395 GCGCGACACCATTAA TGCTCCGGCGGAA GAGC TTGGGCCGGAGCA ACTGGCGCAGCGCGC TERM 482 370200 - 370225 + G 83 -7.4 -4.53705 | opp_overlap 370183 370181 GGCAGCGCGGCGTAT CCCGCCGGGG CAAGCA CCGCCGCGGG TTTTCTGTCGCACTT yfhI 369090 - 370373 + | aminopeptidase B TERM 483 370389 - 370414 + F 74 -11.1 -2.77043 | gap 1, opp_overlap 370403, overlap 370388 ACGGTGTTTTTGTAG GCCGGGTAAGCG AAG CGCC-ACCCGGC ATTTCGCCTGATGGC TERM 484 370430 - 370442 + F 70 -9.1 -3.30124 | opp_overlap 370403 ATTTCGCCTGATGGC GACGC CGT GCGTC TTATCAGGCCTACAA TERM 485 370681 - 370660 - g 75 -5.9 -4.60487 | gap 1, opp_overlap 370662, overlap 370663 370666 CAGCACTGGGAAAAA GAA-GACGGC ACG ACCGTCATTC CCTTCTTTACTTCTC TERM 486 370677 - 370663 - g 79 -7.8 -4.41633 | opp_overlap 370662, overlap 370660 370666 CACTGGGAAAAAGAA GACGGC ACG ACCGTC ATTCCCTTCTTTACT sseB 370474 - 371259 + | enhanced serine sensitivity protein SseB TERM 487 371291 - 371266 - T 100 -14.7 -4.66318 | opp_overlap 371266, overlap 371270 ATCATCTGAAGAAAA GAAAGCCGCCC AACA GGGCGGCCTCC TGGCTTACCTGCTCT TERM 488 371266 - 371291 + T 70 -10.3 -2.55722 | opp_overlap 371266 371270 ATCATCTGAAGAAAA GAAAGCCGCCC AACA GGGCGGCCTCC TGGCTTACCTGCTCT TERM 489 371287 - 371270 - T 100 -14.1 -4.87892 | opp_overlap 371266, overlap 371266 TCTGAAGAAAAGAAA GCCGCCC AACA GGGCGGC CTCCTGGCTTACCTG TERM 490 371501 - 371462 - T 76 -12.1 -2.57211 | overlap 371432 371461 ACCGCTGGCGATAAT GCCGTGATAGCAGGCAC TGTGGT GTGCCTGCGCTTACGGC CATGGAACATCCTCT TERM 491 371700 - 371740 + T 90 -15 -2.72227 | gap 1, opp_overlap 371712, overlap 371712 GCCGCGAACCGGACC AG-CACAAAAAAACCGCTC AACT GAGCGGTTTTTTTGTGGCC TGCTTAAACAGTATT TERM 492 371712 - 371727 + T 100 -10.4 -5.626 | opp_overlap 371712, overlap 371700 ACCAGCACAAAAAAA CCGCTC AACT GAGCGG TTTTTTTGTGGCCTG TERM 493 371727 - 371712 - T 100 -10.4 -5.67967 | opp_overlap 371712 371700 ACCAGCACAAAAAAA CCGCTC AACT GAGCGG TTTTTTTGTGGCCTG SPA0333 372496 - 371828 - | hypothetical protein sseA 373584 - 372742 - | 3-mercaptopyruvate sulfurtransferase TERM 494 373064 - 373049 - G 77 -8.2 -4.11216 | opp_overlap 373041 373063 GCCTGAGCGTTAAAA CGCGCC GCCG GACGCG CGTCAACGATTTGCG TERM 495 373461 - 373432 - G 100 -8.5 -5.27779 | opp_overlap 373434 373440, overlap 373434 373435 373448 TTCAATATCAAAAAA CAGCGCGCCGG GAATATGT CCGGCGCGATA TTCGCCCGCCATATC TERM 496 373459 - 373434 - G 84 -8.9 -4.26398 | opp_overlap 373434 373440, overlap 373432 373435 373448 CAATATCAAAAAACA GCGCGCCGG GAATATGT CCGGCGCGA TATTCGCCCGCCATA TERM 497 373458 - 373435 - G 76 -12.4 -3.14212 | opp_overlap 373434 373440, overlap 373434 373432 373448 AATATCAAAAAACAG CGCGCCGG GAATATGT CCGGCGCG ATATTCGCCCGCCAT TERM 498 373949 - 373939 - g 75 -6.8 -4.45083 | overlap 373940 GGCACAGCTACAAAA GCTG GCG CAGC AAAGCCAGGGCAAAG TERM 499 374109 - 374091 - g 74 -4.4 -4.77165 | opp_overlap 374103 TGGTTGATAAGAAAA GCGGCAGC GTT GATGGCGC ATGGGAGCTGGCGCC TERM 500 375265 - 375255 - g 95 -8.2 -5.02074 | overlap 375256 375257 TGACGGCGCAAAAAA CGCC GCT GGCG CCTGCGGATGAGGTG TERM 501 375759 - 375749 - g 78 -2.4 -5.252 | opp_overlap 375749 CAGGGCGAGAAAAAA GCGG TGT CCGG TTTACAGGTGCGGCT TERM 502 377435 - 377423 - g 74 -4.7 -4.76041 | GATAGCGATGAAAAA CGGCG CGC CGCGG TGGATATCGGCATCT TERM 503 377745 - 377732 - g 80 -9.5 -3.96148 | GCGCGTCAGCAGAAA GCGCC GCTC GGCGC GCTGCGCGAAATCTG TERM 504 378452 - 378442 - g 70 -6.8 -4.11216 | overlap 378448 378449 GCTGGAGCTGGAAAA CCAG AAT CTGG CTGACAGCAGCGCCA SPA0335 373793 - 378727 + | putative lipoprotein TERM 505 378770 - 378782 + G 100 -6.2 -5.50723 | opp_overlap 378749, overlap 378769 378768 CGCTGGCTGTGGCTG GCGG GCGCG CCGC TTTTTATTTTCCTGG TERM 506 379471 - 379499 + G 73 -5.1 -4.57569 | GCCGGTCTGGCTGGC GCCGCGTCAAATG CCG CAACTGGCGCCGC TTTTTGCCCGAATGA TERM 507 380933 - 380948 + G 78 -6.1 -4.70887 | GGCAAACCTGTTAAT GGCGA AAATAA TCGCC TTTCTTTATTACTCA pbpC 378728 - 381043 + | penicillin-binding protein 1C TERM 508 381085 - 381101 + F 72 -3.1 -5.03145 | TCATTTAATTTAAAG TTAATGA GAA TTATTAA TTTTTTCCAGAATTA TERM 509 381229 - 381216 - f 81 -3.8 -5.36364 | overlap 381220 TGAAAAATATAAAAA GCCA GGGAAA TGGC GAACAGCCCGCTATT TERM 510 381689 - 381712 + F 79 -9.4 -4.08767 | overlap 381688 CGCTATGTTCATGTT GGCACCGCCG TTTC CGGCGGCACC TTTTCCGGCGATAAA TERM 511 383402 - 383371 - f 70 -8.8 -3.35679 | gap 1, overlap 383375 383391 383392 GGTGCGTATTCATAA CTCACG-CGGGATTT GCG AAATCCCGGCGGAAG TGACGCCGCGCATTA TERM 512 383398 - 383375 - f 71 -10.4 -2.6063 | gap 1, overlap 383371 383391 383392 CGTATTCATAACTCA CG-CGGGATTT GCG AAATCCCGGCG GAAGTGACGCCGCGC SPA0338 383575 - 384204 + | putative anaerobic reductase component TERM 513 384315 - 384337 + G 76 -9.1 -3.9712 | gap 1 TGCCTGCACGTGGCG CGCTTCCCGC GATG GCGGG-GGCG TTTGTACTGGCCTGC SPA0339 384197 - 385006 + | putative anaerobic reductase component TERM 514 385031 - 385064 + G 85 -6.8 -4.86293 | gap 2, overlap 385035 385036 TGACGATCGATCCGG CGGTAGACGTGACGCA GGCC TGCGTC-CGTC-GTCG TTTTCGTTTTTCTTC TERM 515 385086 - 385116 + G 100 -13.3 -4.18018 | overlap 385083 TTTTTCTTCCTGCCG CGCTTGCGCCG ATGTTTGTC CGGCGCAGGCG TTTTCGCTGGCGCAG SPA0340 385006 - 385869 + | putative polyferredoxin ndk 385990 - 386421 + | nucleoside diphosphate kinase TERM 516 386538 - 386570 + F 76 -4.1 -5.04249 | gap 2, overlap 386541 ATTTGTACAATGCAG CGCCCCCGGACGAGC AGTAA GCTTA-CC-GGGGCG TTTCTTTTTTCAACC yfgB 386628 - 387794 + | hypothetical protein TERM 517 388182 - 388194 + G 70 -9.1 -3.66095 | CTCAGCCAGCAGGCT GTCGC TGA GCGAC TTTGCCTGAAGGTTT TERM 518 388697 - 388675 - g 86 -12.6 -3.6682 | overlap 388628 388627 CGGCAGCGACGCAAA CGCCAGCGCC AAC GGCGGCGGCG ACGCAAAATACGGTA yfgA 388086 - 389090 + | hypothetical protein ispG 389117 - 390235 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 519 390244 - 390264 + F 82 -13.3 -3.00298 | opp_overlap 390239 AAAATAAGAACGTGA TGGGAAGCG GCG CGCTTCCCG TGTATGATTGAACCC TERM 520 390273 - 390319 + F 80 -5.8 -5.0916 | gap 1 CTTCCCGTGTATGAT TGAACCCGCATGGCT-CCCGG TTCGTT CGGGGAAGCGCTGAGGGTTCA TTTTTATATTCAGAA TERM 521 390382 - 390357 - g 84 -6.1 -5.03747 | opp_overlap 390357 AAACGTGGCAAAAAA CATTCAAGCCA TTCG CGGCATGAACG ATTATCTGCCTGGCG TERM 522 390454 - 390438 - g 70 -3 -4.71061 | gap 1 AGGCACACTCAAAAA CGT-GCT CGGC AGCTACG GTTACAGTGAAATCC TERM 523 391559 - 391607 + G 77 -8.1 -4.1822 | gap 1, opp_overlap 391548 391568 AGGATTTGCGCTCCG GTGAGCAAACG-GCAGTGGCGC AGGACA GCGTCGCCGCGCATTTGCGCAC TTTATTGGGCTAAGG hisS 390346 - 391620 + | histidyl-tRNA synthetase TERM 524 391895 - 391885 - g 91 -6.8 -5.18726 | opp_overlap 391891 GGCTGAGAATAAAAA CACC TAT GGTG CGCTGGCGTCTATGG TERM 525 392173 - 392159 - g 79 -2.7 -5.25803 | overlap 392160 392161 AAGGGTGATAAAAAA GGCGC GCGCA GCGCA TGGGAAGCGGGCGTC yfgM 391634 - 392254 + | hypothetical protein TERM 526 393013 - 393033 + G 71 -7.5 -3.94 | opp_overlap 393013, overlap 392999 GCGACGTTGATACCA CGCCGGTTG TGG TAAACGGCG TTGTTTACGCGTTGG yfgL 392265 - 393443 + | outer membrane protein assembly complex subunit YfgL TERM 527 393465 - 393495 + F 75 -11.2 -2.94422 | opp_overlap 393470, overlap 393470 CGGTTGTGCGTTTTA AAAAACGGCTCCTG GTG TAGGGGCCGTTTTC CTGTTTTTAACAATG TERM 528 393490 - 393470 - f 91 -8.2 -5.00616 | opp_overlap 393465 393470 GTGCGTTTTAAAAAA CGGCTCCT GGTGT AGGGGCCG TTTTCCTGTTTTTAA TERM 529 393470 - 393490 + F 95 -11.1 -4.60746 | opp_overlap 393470, overlap 393465 GTGCGTTTTAAAAAA CGGCTCCTG GTG TAGGGGCCG TTTTCCTGTTTTTAA engA 393560 - 395032 + | GTP-binding protein EngA TERM 530 395054 - 395081 + F 100 -15 -3.59979 | gap 1, opp_overlap 395049 TTCAGTAATATTCCA GGCCTGATAAGCG CAG CGCT-ATCAGGCC TTTCAAGTAAAAGCG TERM 531 395106 - 395094 - f 70 -4.7 -4.4078 | GCCTTTCAAGTAAAA GCGAG TCA CGCGC CTGAGGAGAATGTTA yfgJ 395121 - 395342 + | hypothetical protein TERM 532 395372 - 395345 - f 72 -4.8 -4.71426 | gap 1, opp_overlap 395353, overlap 395346 TTCCGATCAATAAAA CCGCTGT-CGACG TTG CGCCGCAGAGCAG AGGCGCCGACGTCTT TERM 533 395692 - 395706 + F 72 -8.6 -3.71148 | AGGGATATCATATGG TGCGAA GGA TTCGCA TTCTGGTTTTGCTAT TERM 534 395859 - 395843 - f 81 -8.1 -4.50841 | overlap 395852 AGAAGAACAGGAAAA TAAAGGA AAG TCCTTTA AAGAACAGGGCGCTG TERM 535 396601 - 396588 - f 73 -9.5 -3.34088 | ACTACCAGATAGGAA CGCCG CTGG CGGCG CAACTCGATCCGGAA TERM 536 397335 - 397301 - f 81 -3.4 -5.38249 | overlap 397305 AGCAATGATAAAAAA GTCACCCTGGCCCAGA CGC CCTGCACCACGGAAAC CCCCTGCGTGTTTAT sinI 397901 - 398866 + | hypothetical protein TERM 537 398903 - 398880 - f 93 -15.4 -3.02043 | opp_overlap 398880, overlap 398882 AAGTTGTCCTCAACA TACCACTCCC CGCG GGGAGTGGTA TTTTCCGCGCACTTT TERM 538 398880 - 398903 + F 100 -15.4 -4.0896 | opp_overlap 398880 398882 AAGTTGTCCTCAACA TACCACTCCC CGCG GGGAGTGGTA TTTTCCGCGCACTTT TERM 539 398901 - 398882 - f 85 -13.6 -3.06696 | opp_overlap 398880, overlap 398880 GTTGTCCTCAACATA CCACTCCC CGCG GGGAGTGG TATTTTCCGCGCACT TERM 540 398911 - 398945 + F 100 -15.9 -3.17075 | GAGTGGTATTTTCCG CGCACTTTGCTTAGC CGCGC GCTAAGCAAAGTGGG TTGAATTACGACAGA TERM 541 399141 - 399157 + G 70 -9.3 -3.67558 | opp_overlap 399129, overlap 399142 399153 TAACGGCACCGTGCC CCGCGCC GAC GGCGCGA TTATTCCCGTGTATC TERM 542 399142 - 399156 + G 76 -12.8 -2.80053 | opp_overlap 399129, overlap 399141 399153 AACGGCACCGTGCCC CGCGCC GAC GGCGCG ATTATTCCCGTGTAT TERM 543 400334 - 400354 + G 74 -11.1 -3.16475 | opp_overlap 400311 CGGTCGTCAGGGCGC CCAACAGCG ATA CGCTGCTGG TTAGCTGTGTAGATA TERM 544 401401 - 401413 + G 73 -9.1 -3.86346 | GACGGCGTGGGCTAC CCTGC CGG GCAGG TTTATCACGGGATCA TERM 545 402073 - 402063 - g 74 -4.6 -4.81249 | GCTGAAAGTGAAAAA GGGC GAT ACCC TACAGTTGAAGGTGA TERM 546 402113 - 402129 + G 71 -7.2 -3.96148 | opp_overlap 402099 402113 402112 ACGCCAGCGGCAAAC CGGTGC CGGAA GCGCCG TTTGTGCTCACCCGC TERM 547 402695 - 402683 - g 77 -4.7 -4.88067 | overlap 402673 402684 ACGGAGCGATAAAAA CCGCC CAG GGCTG GCCGATCATCCGTTC TERM 548 402751 - 402729 - g 76 -9.8 -3.87815 | CTGGAGCGGCACAAA CGCCGGGA CAATCAC CCCCGGCG CGCCACCCTATGACT TERM 549 402954 - 402936 - g 81 -3.8 -5.15969 | GGTGAAGGCAAAAAA CAGCGA CTCGATT CCGCTG GTGATCACCACCACC TERM 550 404896 - 404876 - g 73 -5.3 -4.56597 | overlap 404877 GTGTGGGGCTAAAAA CCGAGCTGA CGG CCAGCGCGA CGGGGGATGTCACGC TERM 551 405065 - 405052 - g 83 -9.5 -4.0825 | TTGTTAATGAAAGAA GCGCC TGCT GGCGC GACGGATAGCCGGAA TERM 552 405105 - 405090 - g 83 -7.6 -4.54026 | opp_overlap 405090 405089 CCGGAAAGAAAATAA CGAAAC CTGG GTTTCG GTTTATACGAAAGCC TERM 553 405209 - 405197 - g 76 -3.3 -5.00616 | GCGTGCTGGAAAAAA TGCGC GAT GAGCA GATAGCAGTCGCTAA ratA 398986 - 405378 + | hypothetical protein TERM 554 406363 - 406395 + T 74 -5.4 -4.57569 | overlap 406364 TGGTGCACCCGTCGA ACGCGCCTGCGCTG AAAGC CAGCGCGGATGTGA TTTTTACCACCCTCA TERM 555 406364 - 406394 + T 70 -8.9 -3.3422 | overlap 406363 GGTGCACCCGTCGAA CGCGCCTGCGCTG AAAGC CAGCGCGGATGTG ATTTTTACCACCCTC TERM 556 408551 - 408539 - T 72 -4.7 -4.66833 | GGTGAAGGTGAAAAA GGGCG ATA CGCTC CAGCTCAAAGTGACG TERM 557 408604 - 408573 - T 95 -12.2 -4.15854 | opp_overlap 408572 408573, overlap 408565 AAAGTGACGGTAAAA GACGCCAGCGGCAA TCCT CTGCCGCAAGCGCC GTTTGTGCTCAGCCG TERM 558 408670 - 408655 - T 79 -10.4 -3.54256 | opp_overlap 408659, overlap 408653 AGGGGGAAAAACATA TCGCCG GCAG CGGCGA CGGCATCGTCTCGGC TERM 559 409637 - 409624 - T 83 -9.5 -4.07568 | overlap 409606 GCGCGGGCTTTAAAA CGCCG CTGA CGGCG GTGATAGAGCACAAC TERM 560 410270 - 410253 - T 81 -4.7 -5.2696 | overlap 410261 GCAAAAGCGAAAAAA GGCGAAC AGAT GGCCGCC ACCGTCACGGTGAAA TERM 561 411109 - 411093 - T 74 -5.8 -4.62872 | overlap 411095 ATGAATGCCGAAAAA TCCGCC GCGCT GGCGAA AAAAGGGGATAAAAT TERM 562 411128 - 411114 - T 76 -4.2 -5.00616 | overlap 411115 411124 411125 411126 GCGCTGGCGAAAAAA GGGGAT AAA ATCCCG CTGACGGTGACCGTC TERM 563 411149 - 411124 - T 75 -6.1 -4.47485 | gap 1, overlap 411115 411114 411125 411126 AAAAAGGGGATAAAA TCCCGCTGACGG TGA CCGTCA-CGGAC GGCGCCGGCACGCCG TERM 564 411148 - 411125 - T 71 -9.6 -3.26864 | gap 1, overlap 411115 411114 411124 411126 AAAAGGGGATAAAAT CCCGCTGACGG TGA CCGTCA-CGGA CGGCGCCGGCACGCC TERM 565 411147 - 411126 - T 73 -10.9 -2.55034 | gap 1, overlap 411115 411114 411125 411124 AAAGGGGATAAAATC CCGCTGACGG TGA CCGTCA-CGG ACGGCGCCGGCACGC TERM 566 411570 - 411520 - T 100 -16.1 -3.56643 | gap 1, overlap 411546 411547 GCCATATGCCGGAAA CGGCGGCCAACAGCGCGGGGGTGA AATT CCACCGCC-CGCTGCTGGCGGCGG AGATGACGTCGAATA TERM 567 411572 - 411546 - T 75 -10 -3.53091 | overlap 411520 411547 AGCGCGGGGGTGAAA TTCCACCGCCCG CTG CTGGCGGCGGAG ATGACGTCGAATAGC TERM 568 411571 - 411547 - T 81 -13.5 -2.71712 | overlap 411520 411546 GCGCGGGGGTGAAAT TCCACCGCCCG CTG CTGGCGGCGGA GATGACGTCGAATAG TERM 569 411661 - 411648 - T 76 -5.2 -4.74706 | opp_overlap 411651, overlap 411640 411649 GCGAACACCCAAAAA GCGG GCGCGA CCGC CTGTGATGCGGCATA TERM 570 412308 - 412320 + T 74 -3.4 -4.94902 | ACGGCTCTTCACGCC TCAC TGGAT GTGA TTTTTATGGTACTTA TERM 571 414275 - 414257 - T 72 -6.6 -4.26076 | opp_overlap 414257, overlap 414258 GCATCGGTATTAAAA TCCTCGCC TCC AGCGTGGA TATTAACGGCGCCAC TERM 572 418654 - 418632 - T 100 -12.7 -4.57474 | gap 1, opp_overlap 418632 GTAAGTTAGACAAAA CCGGGC-GGG TATT CCCTGCCCGG TTTTGAGGCGAATGA TERM 573 418632 - 418654 + T 100 -14.1 -4.08216 | opp_overlap 418632 GTAAGTTAGACAAAA CCGGGCGGG TATTC CCTGCCCGG TTTTGAGGCGAATGA xseA 420131 - 418782 - | exodeoxyribonuclease VII large subunit TERM 574 418940 - 418910 - G 71 -9.7 -3.53012 | gap 1 CCGTTGTCGTCGAAA CCGTATAGCCGCGC GCCA GCGTGGCCA-ACGG GCTGACCGCTTCCAG TERM 575 421292 - 421316 + G 71 -8.5 -3.85817 | opp_overlap 421283, overlap 421283 AAGGCACCGGAATTC CGGTTATCGCT GAC GGCGGTATCCG TTTCTCCGGCGACAT guaB 420292 - 421758 + | inositol-5-monophosphate dehydrogenase TERM 576 421765 - 421788 + F 100 -13.9 -4.56113 | GGCTCCTGATTTTCT TCGCCCGAC CTTCGC GTCGGGCGA TTTATTTAATCTGTT guaA 421828 - 423405 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 577 423454 - 423473 + F 100 -10 -5.42975 | opp_overlap 423454 TAAAAGTGAATTTAA CCCTCTGT TTTT GCAGAGGG TTTTTATTTATGTGC SPA0358 423493 - 423651 + | hypothetical protein SPA0360 425183 - 424644 - | hypothetical protein TERM 578 424828 - 424841 + g 100 -8.1 -5.38958 | ACCCGGTCCTCTTCC CTGGC CAGT GCCAG TTTTTGTTTCTGAAT SPA0361 425714 - 425199 - | putative outer membrane lipoprotein TERM 579 425852 - 425826 - H 95 -3 -5.90981 | opp_overlap 425799 425826 TTACACTAAAAAAAA CAAAGCATTAGA TAA TACGATGCTTTG TTTTTATCGGTTCAT TERM 580 425826 - 425852 + H 72 -3.1 -4.92314 | opp_overlap 425826, overlap 425799 TTACACTAAAAAAAA CAAAGCATT AGATAATAC GATGCTTTG TTTTTATCGGTTCAT SPA0362 425997 - 426257 + | hypothetical protein SPA0363 426328 - 426465 + | hypothetical protein SPA0364 426562 - 428775 + | hypothetical protein TERM 581 428803 - 428777 - T 100 -18 -3.78022 | opp_overlap 428771 428770 CTGAGATTCAGTAAA GGCAGACGCCGC GGC GCGGCGTCTGGC TCACAATTTACGCGG ppx 430352 - 428811 - | exopolyphosphatase TERM 582 429856 - 429825 - G 81 -12.4 -3.53343 | gap 1, overlap 429828 429830 AACGCCGCCGGGAAA GTA-GAGCTGCGCGA AGC TCACGCAGCCCATAC GACGGCTTTCAACCA TERM 583 429852 - 429828 - G 86 -14.3 -2.90496 | overlap 429825 429830 GCCGCCGGGAAAGTA GAGCTGCGCGA AGC TCACGCAGCCC ATACGACGGCTTTCA TERM 584 429850 - 429830 - G 81 -13.3 -3.00525 | overlap 429828 429825 CGCCGGGAAAGTAGA GCTGCGCGA AGC TCACGCAGC CCATACGACGGCTTT TERM 585 430200 - 430226 + g 70 -6.5 -4.07687 | overlap 430202 TTTATTATCTGCGCC TAGCCCGTCCG CCAGA TGGACGCGCTG TTTTAAGCGCCCGAT ppk 432423 - 430357 - | polyphosphate kinase purN 433250 - 432612 - | phosphoribosylglycinamide formyltransferase TERM 586 433093 - 433106 + g 71 -9.5 -3.494 | opp_overlap 433075 GCAGTCAGCGCTTGC GCCGG AATG CCGGC TTCTCTGGCGCGTTC TERM 587 433124 - 433140 + g 70 -9.4 -3.73914 | overlap 433110 CTCTGGCGCGTTCAA GGCCGA ACGCG TCGGCC TTATTGCTGAATACT purM 434287 - 433250 - | phosphoribosylaminoimidazole synthetase TERM 588 434290 - 434303 + H 79 -2.3 -5.46657 | TCTTATCGGTCACTG CCTGG TTCC CCACG TTTTTTCTTGCGGTA upp 434700 - 435326 + | uracil phosphoribosyltransferase TERM 589 435368 - 435340 - f 74 -10.4 -3.13412 | opp_overlap 435345, overlap 435345 AAGTGAATAAATAAT TAAAAGCCGACT TTAAG AGTCGGCTTTTT TTTGAATAAAACAAC TERM 590 435345 - 435363 + F 100 -11 -5.81412 | opp_overlap 435340 435345 AATAAATAATTAAAA GCCGACTT TAA GAGTCGGC TTTTTTTTGAATAAA TERM 591 435363 - 435345 - f 93 -10.3 -4.65969 | opp_overlap 435345, overlap 435340 AATAAATAATTAAAA GCCGACT TTAAG AGTCGGC TTTTTTTTGAATAAA TERM 592 435681 - 435691 + G 72 -2.4 -4.84311 | CTGGGTTATGAAGTG GCGC TGG GCGG TTTTATTATGTGCGG TERM 593 435754 - 435744 - g 74 -2.4 -5.03314 | TTCATCGTTAAAAAA GCGG GCA CCGG CTGGCTGGATGTGAT uraA 435414 - 436703 + | uracil transporter TERM 594 436699 - 436679 - f 100 -14.1 -3.65902 | GGTACTGGAGGCAAA TGATGCGGA GTC TCCGCATCA GTAACGGGTTGCCGG TERM 595 436711 - 436731 + F 100 -18.3 -3.58726 | opp_overlap 436704 ATCAGTAACGGGTTG CCGGGCAGC GAT GCTGCCCGG TTCTATCTCACGGGA yfgE 436774 - 437499 + | DNA replication initiation factor TERM 596 437517 - 437502 - T 79 -11.8 -3.12668 | opp_overlap 437502, overlap 437494 CCTGAAACTGTAATA CGCCGC GACG GCGGCG TTTAACGGTTAACCG TERM 597 437502 - 437517 + T 86 -11.8 -3.60792 | opp_overlap 437502 437494 CCTGAAACTGTAATA CGCCGC GACG GCGGCG TTTAACGGTTAACCG yfgD 437885 - 437526 - | putative arsenate reductase SPA0373 439388 - 437925 - | hypothetical protein TERM 598 438917 - 438927 + g 83 -8.2 -4.43681 | opp_overlap 438892, overlap 438892 CCACCCAGGTAAGCG GCGC GCT GCGC TTTTGATCTTCCATC TERM 599 439046 - 439031 - G 71 -4.6 -4.65895 | CCGCGTAGCGAAAAA GCGCCG AGTG CAGCAC CACATTGCCGCCAAA TERM 600 440773 - 440792 + H 100 -9.3 -5.18726 | CGCTCTTTTTTTTAA TGCCGCA CCGTGT TGCGGCA TTTTTATTGTCGGAA SPA0375 441004 - 442128 + | hypothetical protein TERM 601 442863 - 442889 + G 93 -11.6 -4.40993 | overlap 442865 GACCCGGCTTTCTGG TGGCGATTAGCG CGC CGCTGGTCGCTA TTTTCCTGCTTTCTC TERM 602 442865 - 442887 + G 86 -12 -3.79533 | overlap 442863 CCCGGCTTTCTGGTG GCGATTAGCG CGC CGCTGGTCGC TATTTTCCTGCTTTC TERM 603 443151 - 443171 + G 75 -12.5 -2.64616 | TGCCGTCCTGGCTGT TGGCGCCCG TGT CTGGCGCCA TGATGTCAATGGCGA TERM 604 443314 - 443326 + G 71 -4.7 -4.56597 | overlap 443312 GGTGCTGGACCATCT GCCGC ACG GCAGC TTTTTCCACGCGACG SPA0376 442196 - 443464 + | putative permease SPA0377 443470 - 444609 + | hypothetical protein bcp 445126 - 444656 - | thioredoxin-dependent thiol peroxidase gcvR 445698 - 445126 - | glycine cleavage system transcriptional repressor dapA 445844 - 446722 + | dihydrodipicolinate synthase nlpB 446739 - 447773 + | lipoprotein TERM 605 447781 - 447800 + F 100 -11.4 -5.31275 | opp_overlap 447781 447779 ACAAGTAATTTAACA GGGCTGGA GTAA TCCGGCCC TTTTTTCTGATAAGA purC 447948 - 448661 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 606 448674 - 448695 + F 74 -11.5 -2.90054 | overlap 448671 TAATTCCGCTTCTGA CCGGGGGGC AACC GCTCTCCGG TATCATCCTTTCCTC SPA0383 448792 - 449655 + | hypothetical protein TERM 607 451168 - 451193 + G 70 -5.4 -4.4891 | overlap 451141 451140 GGCTATACGCCGGAG CTGTGGCGTT TCTGGC AACGCTGCGG TTTTGTGCTGGTACG ypfI 449671 - 451689 + | hypothetical protein TERM 608 451671 - 451714 + T 72 -10.3 -2.88433 | overlap 451670 451680 CGTAATGCCCGGCGG TGGGGAGCATGCCGGATAG CGATAC CTGTCCGGCATGATATCCG GTTACTTTTTCGGCT TERM 609 451680 - 451705 + T 73 -11.2 -2.64973 | overlap 451671 451670 CGGCGGTGGGGAGCA TGCCGGATAG CGATAC CTGTCCGGCA TGATATCCGGTTACT SPA0385 451916 - 451716 - | hypothetical protein dapE 453071 - 451944 - | succinyl-diaminopimelate desuccinylase TERM 610 452101 - 452089 - G 85 -9.1 -4.38154 | overlap 452091 ATACGGGCGATAAAA CGTCC GTC GGACG TACCGCCCGTCGTCA TERM 611 452939 - 452923 - G 73 -5.1 -4.59773 | CGCCATGCCCAAAAA TTTTGCG TGT CGCCAAA ATCCATATGCTCAAT yffB 453431 - 453075 - | hypothetical protein TERM 612 453969 - 453939 - R 72 -9.1 -3.49777 | opp_overlap 453944, overlap 453944 TCCCATAGAGGATAA GAAAAGGCGACTC AACGA AAGTCGCCTTTTT TGTGCCCGATGACCC TERM 613 453944 - 453964 + r 100 -8.3 -5.24531 | opp_overlap 453944 453939 TAGAGGATAAGAAAA GGCGACT CAACGAA AGTCGCC TTTTTTGTGCCCGAT TERM 614 453964 - 453944 - R 93 -9 -4.82819 | opp_overlap 453944, overlap 453939 TAGAGGATAAGAAAA GGCGACTC AACGA AAGTCGCC TTTTTTGTGCCCGAT acrD 457118 - 454005 - | aminoglycoside/multidrug efflux system TERM 615 454905 - 454919 + g 70 -5.6 -4.45945 | ATCGTCAATCGATAC GCCCAG CGC CTGCGC TTTTCGTTGGTCAAT TERM 616 457258 - 457291 + H 72 -8.7 -3.74238 | opp_overlap 457268, overlap 457251 457259 457261 ATACTTTTTGTGCCA ACGCCGGAAAGCCTG ACAT CTGGCCTTCCGGTGA TTTGCCGTTCTTTAC TERM 617 457259 - 457290 + H 79 -12.2 -2.8382 | opp_overlap 457268, overlap 457258 457251 457261 TACTTTTTGTGCCAA CGCCGGAAAGCCTG ACAT CTGGCCTTCCGGTG ATTTGCCGTTCTTTA TERM 618 457261 - 457288 + H 75 -11.2 -2.95527 | opp_overlap 457268, overlap 457259 457258 457251 CTTTTTGTGCCAACG CCGGAAAGCCTG ACAT CTGGCCTTCCGG TGATTTGCCGTTCTT TERM 619 457502 - 457537 + H 76 -8.9 -3.66874 | ATATAAACGGTATGA TCGCCGTCAGGCGCG GTGTGA CGCAGCTCACGGCGA TTTCGCTCGCGTTGG TERM 620 457923 - 457952 + H 74 -5.7 -4.60889 | overlap 457925 GGCAATCGTCGCGCG CTCTTCCATTAAC AAAA GTTGCTGGAAGTG TTTTTGCGCCTGATT TERM 621 458987 - 458965 - H 91 -6.2 -5.48787 | opp_overlap 458978 458979 ACAATATAGAAAAAA GCCTTAGCCA GAC TGGCCGAGAC CGGGCGTTTAACCGT TERM 622 460753 - 460735 - g 74 -4.5 -4.69464 | AAAAGAGGTGAAAAA CGCGC GGGAAGAGG GCGCG AACTTTGAATTTAAC TERM 623 460812 - 460822 + G 71 -4.6 -4.65895 | overlap 460788 CGCACGGGCGCGCCA GCGG TAT TCGC TTTTTGCGTACGCGG aegA 459191 - 461152 + | putative oxidoreductase Fe-S binding subunit TERM 624 461292 - 461304 + T 72 -9.1 -3.5393 | CGATAAACATTTTCC CGTCG GGT CGACG TTTAACAGGCCTGAT TERM 625 461532 - 461508 - T 100 -14.4 -3.6682 | opp_overlap 461508 GCGTAGCGAGTCAAA CCTCACGTAC TACGT GTACGTGAGG TTTTTGCGCGCTGTC TERM 626 461508 - 461532 + T 100 -14.4 -4.59109 | opp_overlap 461508 GCGTAGCGAGTCAAA CCTCACGTAC TACGT GTACGTGAGG TTTTTGCGCGCTGTC SPA0391 462898 - 461600 - | hypothetical protein TERM 627 462723 - 462747 + g 88 -11.5 -4.21922 | opp_overlap 462723 462721 TTTATCACCAGAAGA TTGATGCTGGG ATA TCCGGCATCAA TTTGATTTTGAATCC yffH 463102 - 463677 + | hypothetical protein TERM 628 463696 - 463685 - f 95 -3 -5.81412 | opp_overlap 463685 TGGACTGAAAAAAAA GAAA TATA TTTC TTTACACAAAAAAGA TERM 629 464594 - 464580 - g 100 -7 -5.47218 | opp_overlap 464589 TTTCACGCAAAAAAA CGCTCG TCT CGCGCG CCGTACATTTGCGGC ypfG 463802 - 464845 + | hypothetical protein SPA0394 464973 - 465203 + | hypothetical protein TERM 630 465244 - 465204 - T 82 -12 -3.40371 | opp_overlap 465204 465202 465229 465231, overlap 465205 GAGTCTACGAAGTAA TTTTGCACAGCCTACAGA ACAGG TCTGCAGACTGCGCAAAG TCTGTGTTGCTAACG TERM 631 465243 - 465205 - T 90 -15.5 -2.63901 | opp_overlap 465204 465202 465229 465231, overlap 465204 AGTCTACGAAGTAAT TTTGCACAGCCTACAGA ACAGG TCTGCAGACTGCGCAAA GTCTGTGTTGCTAAC tktB 467266 - 465266 - | transketolase talA 468236 - 467286 - | transaldolase A TERM 632 469164 - 469146 - g 74 -7.4 -4.18018 | GTTGGGGATGCAAAA GCACAACA TCG TGGTGTGC GACTCTAAAGGCGTT TERM 633 470353 - 470373 + G 83 -10.4 -3.92324 | GAGATCGCCGTAATG GCGGCGGA AACCG TTCGCCGC TTTGGTATTGAGCCG maeB 468508 - 470787 + | malic enzyme TERM 634 470810 - 470827 + F 100 -12.7 -5.60993 | overlap 470806 TTACTCTCTCTTCTG GCGCAGG TTCT CCTGCGC TTTTTTTATGCGCCG eutS 471205 - 471540 + | putative ethanolamine utilization protein EutS eutP 471553 - 472032 + | putative ethanolamine utilization protein eutQ 472010 - 472699 + | putative ethanolamine utilization protein TERM 635 473018 - 473000 - g 75 -6.6 -4.37886 | overlap 473001 473013 TGACGGCGGACAAAA TGGTCGCC AAA AGCGACCC GCGCCTCGGCTTTCG TERM 636 473092 - 473106 + G 70 -3.4 -4.70659 | ATCGAACTGGCGGAA CCCTGG CAG CCGTGG TTTTTCGATATCCGC eutT 472696 - 473499 + | putative cobalamin adenosyltransferase TERM 637 473781 - 473770 - g 81 -3.6 -5.24129 | overlap 473772 GCGCCGGAGAAAAAA CGCC GCCG GACG CAGTGGAAAAGCTTA TERM 638 474278 - 474252 - g 73 -5.1 -4.56597 | gap 1, overlap 474254 GTCGCCGCGCAAAAA GC-GCCTGACAG CCCG CTGCAAGGCCGC GCCAACGTGATGATT eutD 473496 - 474512 + | phosphotransacetylase eutN 474553 - 474843 + | putative ethanolamine utilization protein EutN TERM 639 474871 - 474859 - f 70 -9.1 -3.30124 | overlap 474861 TGGTAGGCCGGATAA GACGC GCA GCGTC GCCATCCGGCATGAA eutM 474896 - 475243 + | putative ethanolamine utilization protein EutN TERM 640 475557 - 475536 - g 83 -7.9 -4.60924 | opp_overlap 475541 475541 TAAATTTGCTAAAAA CGTGGCGCA GGCG CGCGGCACG CCGGGCGTCGAGTGT eutE 475255 - 476658 + | putative aldehyde dehydrogenase TERM 641 476745 - 476714 - g 91 -10 -4.66953 | opp_overlap 476732 476733 476736, overlap 476734 476736 CCAAGACTGCAAAAA GCGGCGGCCCTGTG TAAC CAGACGCCCGCCGC CAGCGACGCGCCGCT TERM 642 476773 - 476734 - g 76 -12.9 -2.70932 | opp_overlap 476733 476732 476736, overlap 476714 476736 GGCCCTGTGTAACCA GACGCCC-GCCGCCAGCGA CGCG CCGCTGT-GGCTGGGCGTC GATTTGGGCACCTGC eutJ 476669 - 477508 + | putative ethanolamine utilization protein EutJ TERM 643 477594 - 477565 - g 70 -7.1 -4.11484 | gap 1 TGCAACGGGTGAAAA CGTTCAGCGT-ACC GCC GGTCACGCTGTGCG GACTTGGGGCGCTCG eutG 477498 - 478685 + | putative alchohol dehydrogenase TERM 644 478822 - 478840 + G 74 -7.5 -4.12857 | opp_overlap 478821 478822 478824 GGGAATTAACGAAAT CATCATG TACAT CATGATG TTCTTTATGCTGATT TERM 645 479006 - 479039 + G 71 -8.1 -3.80174 | gap 1, overlap 478972 GTCGGTATGACCGCG CTGGCGCCGGTGC-TG GCG CATGTACTGGGGCCGG TTATTATCCCGGTAT eutH 478805 - 480031 + | hypothetical protein TERM 646 480363 - 480375 + G 76 -9.1 -3.96148 | TATGACGCTCTCGCA GTCGC TGG GCGAC TTTGTGGTCGCCAGC eutA 480028 - 481251 + | putative ethanolamine utilization protein EutA eutB 481263 - 482624 + | ethanolamine ammonia-lyase heavy chain TERM 647 483233 - 483251 + G 73 -8.8 -3.91144 | opp_overlap 483224, overlap 483225 483236 GAAGCAGGCCGGGCT GAACGTCG GCA CGCCGTTC TTTGTGCGCTATGGC eutC 482643 - 483539 + | ethanolamine ammonia-lyase small subunit eutL 483549 - 484208 + | ethanolamine utilization protein EutL eutK 484221 - 484715 + | ethanolamine utilization protein EutK TERM 648 485797 - 485774 - g 71 -4.5 -4.57569 | overlap 485775 485776 TTATTTGCCGAAAAA CCGTCGTTG ACGCTG CATCAACGG ATGCGGCAATGGGCT yfeG 484763 - 485815 + | transcriptional regulator EutR TERM 649 485992 - 486004 + T 70 -9.1 -3.30124 | opp_overlap 485975, overlap 485947 CCCATGCCGGATGGT GACGC GTT GCGTC TTATCCGGCCTACGA hemF 486940 - 486014 - | coproporphyrinogen III oxidase TERM 650 486582 - 486592 + g 71 -4.6 -4.58395 | opp_overlap 486557 AACCACCACACCGGA TCGG CGC CCGG TTTTTCGGCAATAAA amiA 487812 - 486943 - | N-acetylmuramoyl-l-alanine amidase I TERM 651 487011 - 487022 + g 71 -5.8 -4.36914 | TGATGCCGTTGGCGA TCGC CGTA GCGA TTTTCTGGCGAAACG TERM 652 487394 - 487374 - G 81 -6.8 -4.70879 | TGGAAAGCGCAAAAA CGGAAGCG CCCGC CGCTTTCG GATTGGTAAAACCAT TERM 653 487638 - 487655 + g 91 -2.5 -5.79588 | CGGGGTCGAGCATCA CCAGCCG TTTA CTGCCGG TTTTTTTGGTTTTGG SPA0417 488025 - 488450 + | putative acetyltransferase yfeZ 488437 - 488886 + | hypothetical protein TERM 654 489108 - 489080 - g 87 -13.8 -3.19389 | GAAGTCACTGAGCAA GGCGTGGGAGCG CTGAC CGCCGCCACGCC GCTGGAAGAACCGGC SPA0419 488948 - 489523 + | hypothetical protein TERM 655 489596 - 489579 - f 77 -11.3 -3.15427 | opp_overlap 489579 AATAGCCTCCATTAA TGCCACG ACTG CGTGGCA TTCTCATTTTCAGGA TERM 656 489579 - 489596 + F 86 -11.3 -3.68359 | opp_overlap 489579 AATAGCCTCCATTAA TGCCACG ACTG CGTGGCA TTCTCATTTTCAGGA SPA0420 489618 - 490517 + | hypothetical protein TERM 657 490620 - 490637 + F 100 -12.7 -5.48825 | opp_overlap 490616 GCATAAAAATGCCCA TCCCCGC CTCC GCGGGGA TTTTTTTACCTAATA yfeF 490755 - 491546 + | short chain dehydrogenase TERM 658 491557 - 491584 + F 100 -14.2 -3.84992 | gap 1, overlap 491559 491581 TCTGATTGATGCCGG TCTCCTCCCCGCG CCG CGTGGGGAGG-GA TTCTCTTATTCCCTT TERM 659 491559 - 491583 + F 93 -15.7 -2.8991 | overlap 491557 491581 TGATTGATGCCGGTC TCCTCCCCGCG CCG CGTGGGGAGGG ATTCTCTTATTCCCT cysP 491704 - 492720 + | thiosulfate transporter subunit cysU 492720 - 493553 + | sulfate/thiosulfate transporter subunit cysW 493553 - 494428 + | sulfate/thiosulfate transporter permease subunit TERM 660 494618 - 494647 + G 70 -3.4 -4.78848 | CGGTACGGACGTTAG CCGCCTGCACGC GCGTGA GCGTAAAGTCGG TTTTGTGTTTCAGCA TERM 661 494858 - 494844 - g 100 -11.4 -4.82901 | overlap 494847 TCCGGCGGACAAAAA CAGCGC GTG GCGCTG GCGCGCGCGCTTGCC cysA 494418 - 495512 + | sulfate/thiosulfate transporter subunit TERM 662 495586 - 495613 + F 74 -3.3 -5.08601 | gap 1, overlap 495587 TATCGTGATTTTGTA GGCCGGGTAAGC ACAGC GCC-ACCCGGCA TTTTTATTGAGCTGA TERM 663 495672 - 495652 - g 85 -8.9 -4.38273 | ATACATTAGAACAAA CCATCGGCA ATA CGCCGCTGG TCAAATTACAACGGC TERM 664 496472 - 496486 + G 71 -10 -3.50332 | GGTGGCGATTATCTG CGATCG CGG CGATCG TTACTTGTCTACCTG cysM 495633 - 496544 + | cysteine synthase B TERM 665 496572 - 496546 - T 76 -8.8 -3.6682 | gap 1, opp_overlap 496546 496544 496542 496560, overlap 496549 GGGCAGGGATTTAAA CGAGGTGCCAT CGTCGT ATGGCACC-CG TGTGTTATAGCGTTT TERM 666 496570 - 496549 - T 73 -10.2 -2.9462 | opp_overlap 496546 496544 496542 496560, overlap 496546 CAGGGATTTAAACGA GGTGCCAT CGTCGT ATGGCACC CGTGTGTTATAGCGT yfeK 496954 - 496577 - | hypothetical protein yfeJ 497654 - 497013 - | glutamine amidotransferase ptsJ 498961 - 497669 - | putative transcriptional regulator TERM 667 498485 - 498441 - G 74 -2 -5.02476 | gap 1, overlap 498444 ATACTGCTTAAAAAA CAGGGATCTTCCACCGCGACG CTGT CGCC-CGGCAGCAGATGCGCG CAAAGCAGTCTTTCG TERM 668 498632 - 498598 - G 74 -10.7 -3.60627 | gap 1 GTAGTTCAGGGGAAA CGGGCGCATCGCCGTA GAGA TACGGCG-TGCGGCTG AGACGGGCAAAATAA pdxK 499044 - 499910 + | pyridoxal kinase SPA0431 499907 - 500146 + | hypothetical protein TERM 669 500272 - 500289 + T 93 -12.7 -3.67597 | opp_overlap 500272 CTACAGGCAAAAAAA TGGCGCC CAAA GGCGCCA TTCTTCACTGCGGCA TERM 670 500289 - 500272 - T 100 -12.7 -5.50499 | opp_overlap 500272 CTACAGGCAAAAAAA TGGCGCC CAAA GGCGCCA TTCTTCACTGCGGCA crr 500818 - 500309 - | glucose-specific PTS system component TERM 671 500409 - 500425 + g 74 -2.2 -5.06414 | opp_overlap 500404 GAGATAACAACCGGA GTCAGG GTAGA CTTGGC TTTTTCTTCCAGCAA ptsI 502586 - 500859 - | phosphoenolpyruvate-protein phosphotransferase ptsH 502892 - 502635 - | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 672 503247 - 503232 - R 87 -6.8 -5.26316 | opp_overlap 503223 503232 GCAGGCCACAAAAAA GCACCC AAAA AGGTGC TTTTTTACGCGTTTT TERM 673 503232 - 503247 + r 83 -6.1 -5.08011 | opp_overlap 503232, overlap 503223 GCAGGCCACAAAAAA GCACC CAAAAA GGTGC TTTTTTACGCGTTTT cysK 504247 - 503276 - | cysteine synthase A TERM 674 504586 - 504572 - R 73 -11.4 -2.58544 | overlap 504571 CGTTATTTCCATAAC GCGTGC TTA GCACGC CAGCAATCAACCCAC cysZ 505320 - 504559 - | putative sulfate transport protein CysZ TERM 675 504832 - 504808 - G 80 -4.9 -5.06414 | opp_overlap 504814 GGCGCTGAACAAAAA CCACAGCACCG GCG CGATGGTTTGG CCAATGCCAGGAATA zipA 505552 - 506538 + | cell division protein ZipA TERM 676 506586 - 506570 - f 74 -10.8 -3.17901 | opp_overlap 506570, overlap 506549 ACATTTTTAACGTAA CCCCCG CCTGT CGGGGG TTTTTTATCATTGAT TERM 677 506570 - 506586 + F 100 -10.8 -5.38249 | opp_overlap 506549 506570 ACATTTTTAACGTAA CCCCCG CCTGT CGGGGG TTTTTTATCATTGAT TERM 678 507522 - 507545 + G 71 -8.1 -3.77219 | gap 1, opp_overlap 507506 CTGGGCTTTGTGGCC CGCGCGCCGC GCTGG GCGGTG-GCG TTTAAATTCCCTGCT ligA 506610 - 508625 + | NAD-dependent DNA ligase LigA ypeB 508618 - 508845 + | hypothetical protein yfeH 509840 - 508842 - | hypothetical protein TERM 679 509450 - 509420 - G 81 -8.3 -4.34402 | gap 1 GCGGCGACAGGAAAA TGCCCAGCAGACTG GACG CAGAC-GCTGAGCA CACCGCGGCCGCGAC TERM 680 509725 - 509706 - G 79 -2.8 -5.28176 | overlap 509713 GCCATGCATAAAAAA CAGCAG AGCGATGG CCGCTG TCGTAATGCCTTCAA TERM 681 509846 - 509834 - G 74 -2.7 -4.84274 | overlap 509827 509825 CAAGGATACGAAAAA GTTTC ATA AAAAC TCCTGAAAGTCGGTG yfeR 509930 - 510856 + | putative transcriptional regulator TERM 682 510998 - 510972 - f 85 -13.8 -3.09834 | opp_overlap 510972, overlap 510955 510974 CAGCGCATCAGGCAA GACCCGAACCTG CTG CAGGTTCGAATC TTCCATATCGCAGAT TERM 683 510996 - 510974 - f 73 -10.6 -3.10796 | opp_overlap 510972, overlap 510955 510972 GCGCATCAGGCAAGA CCCGAACCTG CTG CAGGTTCGAA TCTTCCATATCGCAG TERM 684 511014 - 511046 + F 71 -9.9 -3.19463 | opp_overlap 511015 511023, overlap 511015 511023 TTCCATATCGCAGAT AGCAAAAAAGCGCCT TTA GGGCGCTTTTTTACA TTGGTGGGTCGTGCA TERM 685 511015 - 511045 + F 80 -13.4 -2.51464 | opp_overlap 511015 511023, overlap 511014 511023 TCCATATCGCAGATA GCAAAAAAGCGCCT TTA GGGCGCTTTTTTAC ATTGGTGGGTCGTGC TERM 686 511045 - 511015 - f 87 -14.9 -2.90763 | opp_overlap 511015 511014 511023, overlap 511023 TCCATATCGCAGATA GCAAAAAAGCGCC TTTAG GGCGCTTTTTTAC ATTGGTGGGTCGTGC TERM 687 511023 - 511037 + F 100 -9.2 -5.17576 | opp_overlap 511015 511023, overlap 511015 511014 GCAGATAGCAAAAAA GCGCCT TTA GGGCGC TTTTTTACATTGGTG TERM 688 511037 - 511023 - f 100 -8.5 -5.24989 | opp_overlap 511023 511015 511014, overlap 511015 GCAGATAGCAAAAAA GCGCC TTTAG GGCGC TTTTTTACATTGGTG TERM 689 512851 - 512834 - g 80 -4.7 -5.0133 | GATGCGGCGAAAAAA CACCTCC GCCC GGTGGCG CGTCAGCCGCTGGAA gltX 511700 - 513115 + | glutamyl-tRNA synthetase TERM 690 513130 - 513164 + T 95 -11.6 -4.2461 | opp_overlap 513133 513137, overlap 513133 513137 ACGCCAGCTGAAACA GAATAAACGGCAGG GCAGACG CCTGCCGTTTATTA TTTGTTAGTCCGCCT TERM 691 513161 - 513133 - T 95 -13.3 -3.82946 | opp_overlap 513133 513130 513137, overlap 513137 CCAGCTGAAACAGAA TAAACGGCAGG GCAGACG CCTGCCGTTTA TTATTTGTTAGTCCG TERM 692 513133 - 513161 + T 95 -13.3 -4.24413 | opp_overlap 513133 513137, overlap 513130 513137 CCAGCTGAAACAGAA TAAACGGCAGG GCAGACG CCTGCCGTTTA TTATTTGTTAGTCCG TERM 693 513137 - 513157 + T 93 -9.7 -4.67968 | opp_overlap 513137 513133, overlap 513133 513130 CTGAAACAGAATAAA CGGCAGG GCAGACG CCTGCCG TTTATTATTTGTTAG TERM 694 513157 - 513137 - T 90 -9.7 -4.52143 | opp_overlap 513133 513130 513137, overlap 513133 CTGAAACAGAATAAA CGGCAGG GCAGACG CCTGCCG TTTATTATTTGTTAG yfeD 513561 - 513169 - | hypothetical protein yfeC 513925 - 513563 - | hypothetical protein TERM 695 514251 - 514232 - H 76 -9.2 -3.77831 | opp_overlap 514232 CCACCAACATTCAAA CCCTCGCT GAAA AGCGGGGG TTTTTGCTTTTTGTC TERM 696 514232 - 514251 + H 100 -11.4 -5.2197 | opp_overlap 514232 CCACCAACATTCAAA CCCTCGCT GAAA AGCGGGGG TTTTTGCTTTTTGTC TERM 697 516104 - 516133 + G 81 -7 -4.788 | CCTGCAATGGCTGTC CGCGCATCCTTC GGCGGA GCAGGGGGCGCG TTTTTCGGTTAATTT TERM 698 516383 - 516372 - g 74 -7.2 -4.15106 | TATGAACGGCTAAAA CGCC TCAA GGCG GACATCATTAAAATC yfeA 514413 - 516602 + | hypothetical protein TERM 699 516634 - 516617 - f 100 -12.7 -5.61596 | opp_overlap 516617 AGCGGCATAAAAAAA CCGGGGA TAGC TCCCCGG TTTCTACATTAAACG TERM 700 516617 - 516634 + F 95 -12.7 -3.97368 | opp_overlap 516617 AGCGGCATAAAAAAA CCGGGGA TAGC TCCCCGG TTTCTACATTAAACG TERM 701 517086 - 517065 - f 71 -7.3 -4.12397 | CGACAGAACGATAAA GGTGCTGAA CATG TTCAGAACC AGCGCTGCGACCACA TERM 702 517991 - 518006 + F 82 -7.6 -4.56597 | opp_overlap 517991 AAACATAGCATGAAA CATAGC AAAG GCTATG TTTTTGAGGCAAAAG TERM 703 518006 - 517991 - f 71 -7.6 -3.85082 | opp_overlap 517991 AAACATAGCATGAAA CATAGC AAAG GCTATG TTTTTGAGGCAAAAG TERM 704 518494 - 518505 + G 75 -3.6 -4.83615 | TTGAAAAAGTCATCG GCGG TTTA CTGC TTTTTGTCGCCGCTG TERM 705 518789 - 518801 + G 86 -10.5 -4.19735 | GGCAATGATGGCGAC CGCCG CGG CGGCG TTTCATTTTAGCGGC mntH 518022 - 519263 + | manganese transport protein MntH TERM 706 519281 - 519305 + T 85 -12.2 -3.38812 | gap 1, opp_overlap 519280 519275, overlap 519279 ACAGAAAGATAGCAG GCCCGATG-CG TGAA CGTCATCGGGC TATTATTCAGCAGGA ypeC 519650 - 519324 - | hypothetical protein SPA0454 520762 - 519764 - | putative ion-channel protein TERM 707 520814 - 520826 + H 70 -4.7 -4.49756 | CGGTTACACTCGCCA GGCGG TAT CCGGC TTTTACTGTTTGCCG TERM 708 521298 - 521315 + G 74 -3.4 -4.85599 | opp_overlap 521291, overlap 521302 GCACCATACCCTCGG TGACGG CGATTT TCGTCA TTTTTATCGCATGAG TERM 709 522104 - 522136 + G 89 -13.4 -3.50853 | overlap 522099 522101 CCGCCGCCTTTGGCG CTGCCGCGCTGTCG CTTCC TGACGGCGCGGAAG TTGTGGTTCAGCCGC SPA0455 520942 - 522594 + | putative decarboxylase SPA0456 523849 - 522614 - | hypothetical protein TERM 710 522897 - 522925 + g 71 -9.6 -3.53444 | gap 1, opp_overlap 522893 CCGCCGCGAAAGCCG CTCGCCGCCGC GATGACCA GCG-CGGCGAG TTTGACGACGGCTAA TERM 711 523396 - 523345 - G 76 -2.9 -5.00616 | gap 2, overlap 523348 523349 523375 GCGTTTGCGAAAAAA TCAGCGCCGCAGCGACGGGCGTGCC GAAC AGCGCGCCGATGG-TGCC-CGCTGA GGCCAGAATCGTCCA TERM 712 523767 - 523744 - G 73 -5.2 -4.60924 | overlap 523745 GAAATTGCTGAAAAA CCGACGCGAT TTTC ATCGCAGCGA TTAAAACCAGGCTTG TERM 713 524098 - 524148 + G 76 -11.8 -3.03243 | opp_overlap 524133, overlap 524085 524139 GGCGGCACGAATGCG CGTCTTGCCCTGTGTGATATCGCC AGT GGAGAAATCTCGCAGGCCAAAACG TATTCCGGCCTGGAT glk 524053 - 525018 + | glucokinase TERM 714 525084 - 525037 - f 95 -12.9 -3.86524 | gap 1, opp_overlap 525026, overlap 525038 AGACGGCGGCATAAA CGCCTTATCCGGCCTACAAAAG TGTGT CATCTGTAGGCCTGATAAG-CG CAGCGTCATCAGGCA TERM 715 525085 - 525038 - f 82 -12.9 -2.91593 | gap 1, opp_overlap 525026, overlap 525037 GACGGCGGCATAAAC GC-CTTATCCGGCCTACAAAAG TGTGT CATCTGTAGGCCTGATAAGCGC AGCGTCATCAGGCAA TERM 716 525127 - 525143 + F 100 -13.7 -5.95166 | opp_overlap 525127 CTTGTCAGTCTCAAA CCGCGTG CCT CACGCGG TTTTTTTTCATTGCC TERM 717 525143 - 525127 - f 93 -13.7 -3.57144 | opp_overlap 525127 CTTGTCAGTCTCAAA CCGCGTG CCT CACGCGG TTTTTTTTCATTGCC TERM 718 525847 - 525826 - g 71 -5.7 -4.27316 | CCGCTGAACTCAAAA TGGCTGCGC GTCG GCGCGGCGA AGATATTATTGATTT TERM 719 525960 - 525973 + G 71 -9.5 -3.53091 | overlap 525957 GGTTATTCCACGTCC CGCGG CATA CCGCG TTTACGCCGCGCGAT yfdZ 525741 - 526979 + | aminotransferase TERM 720 527013 - 526984 - T 86 -9.3 -4.4767 | opp_overlap 526989, overlap 526989 GCACGGAGTAGAAAA GCAAACAGGAGCC CTAT GGCTCCTGTTTTT CTTTGCATTGTACTT TERM 721 526989 - 527008 + T 100 -13.6 -5.33026 | opp_overlap 526984 526989 GAGTAGAAAAGCAAA CAGGAGCC CTAT GGCTCCTG TTTTTCTTTGCATTG TERM 722 527008 - 526989 - T 100 -13.6 -4.28487 | opp_overlap 526989, overlap 526984 GAGTAGAAAAGCAAA CAGGAGCC CTAT GGCTCCTG TTTTTCTTTGCATTG TERM 723 527415 - 527398 - T 82 -5.5 -5.24989 | opp_overlap 527398 527397 CGACACAGTAAAAAA TCGCCTG TAAA CAGGAGA CTTATCGCTAAAAGC TERM 724 527503 - 527482 - T 80 -7.3 -4.61566 | opp_overlap 527487, overlap 527487 TGTGAAATGACAAAA TAAAAGGCC TTGC GGCCTTTTT CAGATGTAGAGTGAC TERM 725 527487 - 527498 + T 80 -7.2 -4.64766 | opp_overlap 527487 527482 AATGACAAAATAAAA GGCC TTGC GGCC TTTTTCAGATGTAGA TERM 726 527498 - 527487 - T 87 -7.2 -5.22137 | opp_overlap 527487, overlap 527482 AATGACAAAATAAAA GGCC TTGC GGCC TTTTTCAGATGTAGA ddg 528423 - 527503 - | lipid A biosynthesis palmitoleoyl acyltransferase TERM 727 527679 - 527690 + g 71 -5.8 -4.2679 | opp_overlap 527672 527679 527678, overlap 527672 TATACAGACGATAAC CCGA GTTA TCGG TTTTCCTGACCATTG SPA0460 528944 - 529186 + | hypothetical protein TERM 728 529397 - 529379 - T 93 -16 -3.11072 | opp_overlap 529379 GTCAGCGAATAGATA GCGCCGAC AAT GTCGGCGC TTCTGTTCCCCGGGA TERM 729 529379 - 529397 + T 100 -16 -3.65812 | opp_overlap 529379 GTCAGCGAATAGATA GCGCCGAC AAT GTCGGCGC TTCTGTTCCCCGGGA pgtP 530815 - 529424 - | phosphoglycerate transporter protein TERM 730 530311 - 530289 - G 74 -7.6 -4.1964 | overlap 530304 CCCAATATCGCAAAA GCCGCACCGA CGA TAGGCGCGAC GATCCCGCCGCCAAC pgtC 531251 - 532444 + | phosphoglycerate transport regulatory protein PgtC precursor TERM 731 533355 - 533324 - f 78 -6.5 -4.56597 | gap 1, opp_overlap 533343 GTTGCGGCGCAAAAA GCCTTACTGGACGC CAGCC GCG-CCAGAGAGGC TACGCTAGGGCGCTT TERM 732 534769 - 534756 - g 73 -5.2 -4.57073 | opp_overlap 534766 GATTTTCTGCAAAAA CCCG TCGATC CGGG CAACCTGTTGATATT pgtA 534438 - 535685 + | phosphoglycerate transport system transcriptional regulatory protein PgtA pgtE 535953 - 536891 + | outer membrane protease TERM 733 536902 - 536933 + T 84 -8.7 -4.72986 | overlap 536904 TCTAGACCACATCGG GATGTCATCGGTC ATAACC GGCCGATGACGAC TTTTTGCTGAACGTG TERM 734 538275 - 538298 + T 81 -12.4 -3.29471 | CTTTATTATCGAGTT CGGTGACCGC CTGA GCGATCACCG TTAATATAGTGGCAG SPA0467 540294 - 538372 - | putative lipopolysaccharide modification acyltransferase TERM 735 538712 - 538722 + g 71 -4.6 -4.53225 | opp_overlap 538702 ATAATCCTTGAGTCA GGGG ATG CCTC TTTAATTTTTTTAAT gtrB2 540565 - 540311 - | bactoprenol glucosyl transferase gtrA 540923 - 540534 - | bactoprenol-linked glucose transferase TERM 736 541060 - 541040 - R 75 -11.3 -3.07895 | opp_overlap 541040 TTGAGTTTTAATATA TTGATCGAT ATT ATCGATCAA TTGGTATTGCTGATT TERM 737 541040 - 541060 + r 79 -11.3 -3.40565 | opp_overlap 541040 TTGAGTTTTAATATA TTGATCGAT ATT ATCGATCAA TTGGTATTGCTGATT TERM 738 541103 - 541140 + r 91 -8.6 -5.00616 | GGAATAAAAACGGGA CATGTAAAGCTTTGCA TCGTCT TACAAGGCTTTGCATG TTTTTTCAGAGAGAG TERM 739 541254 - 541235 - R 95 -2.8 -5.8901 | ACATAAAATAAAAAA GAATGGCA CATG TCCCATCC CTTCGATTTCGACAA TERM 740 542098 - 542110 + r 81 -3.3 -5.4505 | AAGGGGACAACGCGG CGCCA GTA TAGCG TTTTTTATTCGCCGG yfdC 543107 - 542166 - | hypothetical protein TERM 741 544122 - 544100 - g 71 -6.3 -4.2679 | gap 1 CAAGCCGCAGGAAAA CCCGAA-CGC ACAG GCGATTCAGG ACGAACTCAAAGAGA vacJ 543396 - 544151 + | VacJ lipoprotein precursor TERM 742 544193 - 544163 - T 86 -11.3 -3.78351 | opp_overlap 544169, overlap 544169 ATAAACGGCAGTAAA TAAAAAGGTGAGC GCAAT GCTCACCTTTTTG ATCCGTTTCAGAAAG TERM 743 544187 - 544169 - T 100 -10.3 -5.33405 | opp_overlap 544169, overlap 544163 GGCAGTAAATAAAAA GGTGAGC GCAAT GCTCACC TTTTTGATCCGTTTC TERM 744 544169 - 544187 + T 100 -11 -4.78764 | opp_overlap 544169 544163 GGCAGTAAATAAAAA GGTGAGCG CAA TGCTCACC TTTTTGATCCGTTTC fadL 545525 - 544212 - | long-chain fatty acid outer membrane transporter TERM 745 544919 - 544934 + g 72 -11.8 -2.68823 | overlap 544918 GAATCCGACCCGCGA CCGGCG CCAG CGCCGG ATTCTGTGCCGCGAC TERM 746 544991 - 544975 - G 70 -6.5 -4.0896 | AAATCGCCCGCAAAA CGTTCGA TTT TCGCACG TGCGTATACCGCATC yfcZ 545890 - 546174 + | hypothetical protein TERM 747 546190 - 546216 + F 100 -15.9 -5.49579 | TCCGTTCATTCACGA CGCCTCCGTCA TCATC TGGCGGAGGCG TTTTCTTTTTTGTCG TERM 748 547181 - 547194 + G 76 -9.5 -3.84406 | opp_overlap 547168 TACACCGCTGACCGA CGGCG CTGC CGCCG TTATTCTGATGACCG fadI 546351 - 547661 + | 3-ketoacyl-CoA thiolase TERM 749 548398 - 548379 - g 76 -3.4 -5.02476 | overlap 548392 AGACGGCGCAAAAAA CGCAGGGT AATT ATCCGGCG ACGGAGCGGATCATT TERM 750 548507 - 548522 + G 100 -5.4 -5.76949 | gap 1, overlap 548504 548510 ATGACGCCGCAATCG CAGGCGC TGC GCG-CTG TTTTTTTTGCCAGTA TERM 751 548510 - 548520 + G 87 -8.2 -4.52949 | overlap 548504 548507 ACGCCGCAATCGCAG GCGC TGC GCGC TGTTTTTTTTGCCAG TERM 752 548580 - 548552 - g 80 -4.3 -5.05782 | overlap 548555 ACCGAGGTGAAAAAA GATCCCGGTAGCG ATG CGCCGCCCGGCCC GCTGAACAGCGTGGG TERM 753 549112 - 549098 - g 91 -7.8 -5.01732 | AAGCTGGCGAAAAAA CAGGGT AAA ACCCCG ATAGTCGTCAGTGAT TERM 754 549458 - 549446 - g 93 -4.8 -5.46698 | opp_overlap 549446 CGTAAAAGCAAAAAA CAGG TTGAC CCTG CTATTTATAAGCTTA fadJ 547661 - 549808 + | multifunctional fatty acid oxidation complex subunit alpha sixA 550017 - 550502 + | phosphohistidine phosphatase yfcN 551153 - 550602 - | hypothetical protein TERM 755 551126 - 551140 + g 95 -5.6 -5.34655 | overlap 551128 ACAGCGCCTGGTCCT CCTCGC TGA GCGATG TTTTCTTTTTCATTC TERM 756 551128 - 551138 + g 74 -6.8 -4.26857 | overlap 551126 AGCGCCTGGTCCTCC TCGC TGA GCGA TGTTTTCTTTTTCAT yfcB 551319 - 552251 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase aroC 552287 - 553372 + | chorismate synthase TERM 757 553399 - 553386 - g 100 -3.7 -5.77856 | AAGAAATGAAAAAAA CCGCG ATTG CGCTG CTGGCATGGTTTGTC mepA 553376 - 554200 + | penicillin-insensitive murein endopeptidase TERM 758 554685 - 554709 + G 80 -9.9 -3.94381 | overlap 554680 554678 554676 CTTTTTCGGGCCTGC CGCCGGGTCGT TTT ACGCTCTGGCG TTTGTCACCTTATGT yfcA 554200 - 555009 + | hypothetical protein yfcM 555009 - 555557 + | putative cytoplasmic protein TERM 759 555814 - 555779 - g 78 -6.9 -4.60924 | gap 2, overlap 555780 555781 CAAAGTCTGGAAAAA GCGATCGGCGCCGGCGA ACTG TCGCCG-CGC-GATCAG GCGTTAGTCAAAGCG TERM 760 555813 - 555780 - g 73 -10.4 -3.35832 | gap 2, overlap 555779 555781 AAAGTCTGGAAAAAG CGATCGGCGCCGGCGA ACTG TCGCCG-CGC-GATCA GGCGTTAGTCAAAGC TERM 761 555812 - 555781 - g 72 -11.7 -2.60776 | gap 2, overlap 555780 555779 AAGTCTGGAAAAAGC GATCGGCGCCGGCGA ACTG TCGCCG-CGC-GATC AGGCGTTAGTCAAAG yfcL 555590 - 555865 + | hypothetical protein TERM 762 555876 - 555901 + T 95 -14.7 -3.63569 | AATAACGCCGTGGGC CGGAAGGCGAC GCTT GCCGCCTTCCG TTATTGACCCATTAC mnmC 557913 - 555913 - | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 763 556105 - 556121 + g 72 -3.5 -4.78237 | opp_overlap 556103 ACCCGGATACACAGG CGCAGGC GCC GCCGACG TTTTGTTATCGGCTA TERM 764 557809 - 557793 - G 74 -2.1 -5.06414 | TGCCGCCAAGAAAAA CGTAGCG TGT CTCTTCG AGTCCATTGTCATTA fabB 558073 - 559287 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 765 559341 - 559322 - f 100 -13.6 -4.09805 | opp_overlap 559322 GTATCAATAATGAAA CAGGTCGC TAAT GCGACCTG TTTTTTCATTCAGGG TERM 766 559322 - 559341 + F 100 -13.6 -5.26875 | opp_overlap 559322 GTATCAATAATGAAA CAGGTCGC TAAT GCGACCTG TTTTTTCATTCAGGG TERM 767 559611 - 559623 + G 84 -2.7 -5.40474 | CATTGGGCCGCTTAT CATTT GTG GAATG TTTTTTTCCGGCGCT SPA0487 559385 - 560041 + | hypothetical protein SPA0488 560626 - 560108 - | putative lipoprotein TERM 768 560264 - 560302 + g 76 -5.3 -4.82901 | gap 1, opp_overlap 560257, overlap 560300 GGTATAAACTTCCAG GTGGATGGGC-GTTGACT CTGT AGCCAACAGAACATCCAC TTTTTCTCCGCCGAG SPA0489 560994 - 560626 - | hypothetical protein SPA0490 561411 - 561163 - | putative DNA-binding protein TERM 769 561387 - 561398 + g 83 -5.8 -4.90013 | TAATATCTGCACGAT GCCA GTCT TGGC TTTTTGGTTCCATTC TERM 770 561435 - 561448 + H 72 -5.3 -4.62069 | CCTAAGAAGATGTGT TATCG GCAC CGATA TTTTTAAGGTAAAAA TERM 771 561479 - 561491 + H 78 -6.3 -4.70659 | opp_overlap 561468 561479 TTAGCGCGAGAAAAA GAAAG TTA CTTTC TTTTTCACTCTGAGA TERM 772 561491 - 561479 - H 80 -6.3 -4.84359 | opp_overlap 561479, overlap 561468 TTAGCGCGAGAAAAA GAAAG TTA CTTTC TTTTTCACTCTGAGA TERM 773 561560 - 561545 - H 70 -4.8 -4.40561 | overlap 561542 TTTCGCGAAAAAGAA GAAATA TTTT TATTTC ATCAGGGGAAAGGAA SPA0491 561584 - 561958 + | putative bacteriophage protein TERM 774 562605 - 562641 + G 71 -10.7 -3.22298 | GTGGAACGGAATGGC GATTTACGGCGCGCTGG CGG CCGGTGCGCCGTTGGGC TTGCTGATCCATAGC TERM 775 563146 - 563125 - g 95 -14.5 -3.54424 | GTGGAGGTTGTGAAA CGCGTACCT GCAC AGGTACGCG GTACGGCGCTCGGCG SPA0492 562138 - 563316 + | hypothetical protein TERM 776 563354 - 563333 - T 70 -5.1 -4.45517 | AAACCAGCCAGAAAA GCGCCAGTA CAAT TATTAGCGC GATAAACAACAGGCC div 564314 - 563313 - | flagella biosynthesis regulator TERM 777 564097 - 564120 + g 90 -5.9 -5.24129 | overlap 564096 TCAGCGGCGGGGAAG TGGCGCGAC AGTAGC GGCGCGTCA TTTTTTATCCCCAGA pdxB 564418 - 565554 + | erythronate-4-phosphate dehydrogenase TERM 778 565567 - 565596 + F 86 -11.5 -3.80279 | gap 1, opp_overlap 565584, overlap 565559 TAATGTCTTCTTAAT GC-TCCCTGTCGAA TAA TGCGACAGGGACGC TTATGTATTTCTGGA usg 565622 - 566635 + | putative semialdehyde dehydrogenase truA 566635 - 567447 + | tRNA pseudouridine synthase A dedA 567496 - 568155 + | hypothetical protein TERM 779 568167 - 568179 + F 77 -3.3 -5.24531 | opp_overlap 568167 ATAGAAAGTAACTCA GCGGT TCG ACCAC TTTTTTATCCAAAGT accD 568305 - 569219 + | acetyl-CoA carboxylase subunit beta TERM 780 569225 - 569257 + F 100 -17.1 -3.06515 | opp_overlap 569230, overlap 569230 TGAGGTCTGATAACT GAAAAGGGCAGGGCC GCA GGCTCTGCCCTTTTG CTTTTCACCGTAAAG TERM 781 569230 - 569252 + F 100 -17 -4.67038 | opp_overlap 569230, overlap 569225 TCTGATAACTGAAAA GGGCAGGGCC GCA GGCTCTGCCC TTTTGCTTTTCACCG TERM 782 569252 - 569230 - f 100 -14.8 -4.3208 | opp_overlap 569230 569225 TCTGATAACTGAAAA GGGCAGGGCC GCA GGCTCTGCCC TTTTGCTTTTCACCG TERM 783 569311 - 569335 + G 70 -5.5 -4.38927 | AAATCTATACCTCAA GCTGCGTCGCC CCT GGCCTCGTGGC TTTCTTATCTGGAAA folC 569287 - 570555 + | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase dedD 570545 - 571219 + | hypothetical protein TERM 784 571402 - 571427 + F 100 -9.8 -5.27938 | AGATAAAAAGTGTGA TGGCGTTGAA TATTTT TTCAGCGCCA TTTTTATTTACGCGT cvpA 571530 - 572018 + | colicin V production protein purF 572056 - 573573 + | amidophosphoribosyltransferase SPA0503 575036 - 573609 - | putative transcriptional regulator SPA0504 575247 - 576644 + | putative amino acid decarboxylase SPA0505 576735 - 578156 + | putative amino acid transporter TERM 785 578701 - 578743 + G 100 -14.1 -3.85817 | gap 1, overlap 578696 GATTTTCTGGCGCTG GCCGCCCGGCTGGAA-GCCG ACAG CGGTATTCCTGTCCGGCGGC TTTCTGCGGGAAACT TERM 786 578975 - 578959 - g 100 -13.7 -3.94853 | opp_overlap 578940 GAACTGAACAGTAAA CCGACCG TCC CGGTCGG GGAGCTGGGCGTCGA TERM 787 579139 - 579122 - g 74 -8.4 -3.9712 | CTATCTTAGGACAAA CCAGCG ATCATA CGCTGG TGGATATTGAAGATT SPA0506 578158 - 579261 + | hypothetical protein TERM 788 579267 - 579293 + F 79 -11.4 -3.38046 | opp_overlap 579269, overlap 579241 579264 579268 TACGCGTTAACGCAT AACCGCCGCGGC TAT GTCGCGGCGGCA TCTTTGACCTCACGA TERM 789 579268 - 579292 + F 86 -14.9 -2.62613 | opp_overlap 579269, overlap 579241 579267 579264 ACGCGTTAACGCATA ACCGCCGCGGC TAT GTCGCGGCGGC ATCTTTGACCTCACG TERM 790 579291 - 579269 - f 100 -16.2 -3.41878 | opp_overlap 579241 579268 579267 579264 CGCGTTAACGCATAA CCGCCGCGGC TAT GTCGCGGCGG CATCTTTGACCTCAC TERM 791 580052 - 580078 + G 77 -3.7 -5.07652 | TTATTTTACCGAAGG TGATCCTGGGG ATCGG TCTCAGAATCA TTTTATTTTACGGCC SPA0507 579325 - 580731 + | putative amino acid permease TERM 792 581198 - 581209 + G 91 -7.2 -4.87786 | CGCGGTGATTATGCC GCCG GTTC CGGC TTTTTATCACCTTCC ubiX 580758 - 581327 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 793 581360 - 581378 + F 95 -13.2 -4.37092 | GCATTATTGTCCCTG TTGCCCTG TTT CAGGGCAA TTTTGTAACCGCGAT argT 581616 - 582398 + | lysine-arginine-ornithine-binding periplasmic protein precursor TERM 794 582436 - 582459 + F 100 -10.4 -4.7497 | opp_overlap 582413 582450 CTGGGGAACTATCAC GGTGCAAAAT AGAT GTTTTGCACC TTTTTGGTGCATAAG TERM 795 582529 - 582568 + F 71 -10 -3.14564 | opp_overlap 582530 582532, overlap 582532 582536 TTTTATGCAAAATAA ACCGGCTGACAAGGTAGA ATAC TTTGCCTTGTCGGCCTGA TTAATGGCACGATAG TERM 796 582567 - 582530 - f 80 -6.9 -4.68908 | opp_overlap 582529 582532 582536, overlap 582532 TTTATGCAAAATAAA CCGGCTGACAAGGTAGA ATAC TTTGCCTTGTCGGCCTG ATTAATGGCACGATA TERM 797 582532 - 582565 + F 87 -14.7 -2.77899 | opp_overlap 582532 582530, overlap 582529 582536 TATGCAAAATAAACC GGCTGACAAGGTAGA ATAC TTTGCCTTGTCGGCC TGATTAATGGCACGA hisJ 582636 - 583418 + | histidine-binding periplasmic protein TERM 798 584108 - 584090 - g 70 -8.8 -3.71378 | overlap 584094 CAGGTGATACTCAAA GCGACAGC GCT GGTGTCGC TGCTGGGCCTGGAAG hisQ 583601 - 584287 + | histidine transport system permease protein hisM 584284 - 584991 + | histidine transport system permease TERM 799 585283 - 585259 - g 78 -6.4 -4.83169 | overlap 585245 AGTGGCGGATAAAAA TCAGCTACGC TTGTT GCGTACCCGA CTGACGATGGTGTTT hisP 585005 - 585778 + | histidine/lysine/arginine/ornithine transporter subunit TERM 800 585809 - 585784 - T 86 -8.9 -4.54026 | gap 1 GCTGAAATAAAAGAA GCCCGGC-GGCG CAT CGCTTACCGGGC AGGATACGGCGCTTT yfcH 586723 - 585830 - | hypothetical protein TERM 801 585889 - 585901 + g 80 -9.1 -4.07568 | GAAATGCGAATCCGG CGGCT TCA AGCCG TTTTGGCAGCGCCCG TERM 802 586018 - 585988 - G 83 -12.4 -3.68222 | overlap 585989 CCGGAATGCGAATAA TCGCCGGGCGGCGC AGC GCGCGACCCAGCGC ATGAGCAAAATGCTC TERM 803 586017 - 585989 - G 86 -15.9 -2.80612 | overlap 585988 CGGAATGCGAATAAT CGCCGGGCGGCGC AGC GCGCGACCCAGCG CATGAGCAAAATGCT TERM 804 586789 - 586799 + r 73 -2.4 -5.14477 | ATACGAATAAGGGTG CCGG ACG CAGG TTTTTTCCGTGTATA yfcG 587496 - 586849 - | putative glutathione-S transferase TERM 805 587664 - 587677 + G 74 -2.3 -4.99035 | CTGTTATTGTGCTGT GGTCG GATG CGAAC TTTTTCTCTCCCTAC TERM 806 587946 - 587933 - g 100 -9.5 -4.88736 | CACGATTTACAAAAA CGCGC CCGC GCGCG ACAGATTCAGGCGTG yfcF 587639 - 588283 + | putative glutathione-S transferase yfcE 588339 - 588890 + | phosphodiesterase TERM 807 589476 - 589462 - g 71 -4.2 -4.66833 | overlap 589463 CCGCAACGCCAAAAA CGAAGC CGC GCTCCA GGAGAAACCGGAAGA SPA0518 588947 - 589501 + | hypothetical protein SPA0519 590526 - 589507 - | putative transcriptional regulator TERM 808 589561 - 589532 - G 77 -8 -4.12532 | opp_overlap 589532 TCCCGCATACATAAA CTGGAGGCGAT-GG ATTT CCGATCGC-TCCAG TTTCCCTGATTTAAC SPA0520 590779 - 591222 + | putative sugar phosphotransferase component II A TERM 809 591421 - 591447 + G 72 -2.3 -4.91109 | gap 2, overlap 591423 AACACTCCGATCTCT CATCGGCCACGCC CGG GGC-TG-CCGATC TTTTTGTAATGGCCA SPA0521 591303 - 591575 + | putative sugar phosphotransferase component II B ulaA 591590 - 592987 + | ascorbate-specific PTS system enzyme IIC TERM 810 593329 - 593303 - g 73 -5.1 -4.58395 | overlap 593304 593307 CGGATCGGCTAAAAA CGCACGG-CGTGG ACG CCACGACCG-GCT CACTGGGACAAGGCA TERM 811 593622 - 593608 - g 71 -10 -3.57144 | opp_overlap 593618, overlap 593618 GTCGTCACCGTCAAA GGCGAT GAT ATCGCC GGACTACTGGCGGTG SPA0523 592984 - 593814 + | putative transketolase N-terminal section TERM 812 594076 - 594087 + G 71 -5.8 -4.28018 | overlap 594084 CTTTACCGCTTTTGC CAGC CGTC GCTG TTTTGATCAGCTCTT TERM 813 594568 - 594552 - g 84 -5.7 -5.03715 | overlap 594541 ACTACGCGGAAAAAA CGCGGCG TAT CGTCACG TGTGAAAACCACAGT SPA0524 593807 - 594760 + | putative transketolase C-terminal section TERM 814 594773 - 594801 + T 95 -11.8 -4.20084 | gap 1, opp_overlap 594772 TAATCATTGAGATAT TGCCGGATG-GCG CTGA TGCTCATCCGGCA TTTTGGATCAATGAT yfcC 596329 - 594809 - | hypothetical protein TERM 815 595264 - 595248 - G 74 -7.2 -4.07687 | ATGCCTTTGGCAAAA CCCACC AGCAA GGCGGG CGCGATCATCATCCT pta 598691 - 596547 - | phosphate acetyltransferase TERM 816 598764 - 598737 - R 100 -16.4 -4.37886 | gap 1, overlap 598740 GGACGGGTTACAAAA CAGCACCGCCAGC GAG GCTGGCGGTG-TG AAATCAGGCAGTCAG TERM 817 598762 - 598740 - R 100 -19.2 -2.8733 | overlap 598737 CGGGTTACAAAACAG CACCGCCAGC GAG GCTGGCGGTG TGAAATCAGGCAGTC ackA 599970 - 598768 - | acetate kinase TERM 818 599141 - 599165 + g 70 -2.7 -4.76075 | overlap 599142 599160 ACTTCAGTCAGACCC AGCAGACCGGA CTC TTTGGTCAGCA TTTTGTTGATCTGAT TERM 819 599517 - 599536 + g 79 -3.4 -5.19879 | opp_overlap 599515 TGGTCTGATGGAAGG CGGTGTCG AACA CGGCGACG TTTTTATCTTTCAGC TERM 820 600444 - 600423 - g 80 -8.7 -4.07568 | opp_overlap 600401 600432, overlap 600424 CGTTTTCGTCGAAAA CCGCGTCAT TCGT ATGACGCGC TATGCCATACGATTT TERM 821 600443 - 600424 - g 76 -12.2 -3.04398 | opp_overlap 600401 600432, overlap 600423 GTTTTCGTCGAAAAC CGCGTCAT TCGT ATGACGCG CTATGCCATACGATT SPA0528 600310 - 600765 + | hypothetical protein TERM 822 600791 - 600810 + F 100 -10.8 -5.52384 | opp_overlap 600791 ATTACGCATATAAAA GAAGGCAT ACCA ATGCCTTC TTTTTTTCATCGCCA TERM 823 600810 - 600791 - f 93 -10.8 -4.55689 | opp_overlap 600791 ATTACGCATATAAAA GAAGGCAT ACCA ATGCCTTC TTTTTTTCATCGCCA yfbU 600848 - 601342 + | hypothetical protein yfbT 601353 - 602012 + | putative phosphatase TERM 824 602019 - 602042 + F 100 -16.8 -3.86346 | opp_overlap 602008 602006 602021 AAGACCTGATCATGA TATGCCCCGC CCTG GCGGGGCATA TTTATGGCAGAATCA TERM 825 602040 - 602021 - f 93 -15 -2.82834 | opp_overlap 602019, overlap 602008 602006 GACCTGATCATGATA TGCCCCGC CCTG GCGGGGCA TATTTATGGCAGAAT TERM 826 602701 - 602691 - g 77 -8.2 -4.13767 | overlap 602692 CGCTTCATGCTAAAA GGCG ATG CGCC CGGACAACAGGCCGG TERM 827 603173 - 603159 - g 77 -11.4 -3.53012 | GTGGTCGGCCTGAAA CGCGAC GGC GTCGCG CTGGAAGGGTCGCTG TERM 828 603749 - 603764 + G 86 -11.8 -3.86194 | overlap 603757 GATGGCGGTGGCGAT GGCGGC ATCC GCCGCC TTTATGACGCCGGTT yfbS 602088 - 603914 + | putative sodium/sulphate transporter TERM 829 603957 - 603930 - T 93 -10.6 -4.39166 | gap 1 CCCCAGACAGGAAAA GGCCTGAT-GGCG CTA CGCTTATCAGGCC TACGGATATCACGCT SPA0532 604619 - 604020 - | hypothetical protein TERM 830 604303 - 604324 + g 80 -4.3 -5.10497 | opp_overlap 604307, overlap 604321 TCATCCGGCGCCATA TCAACCAGC TTTT GCTGGGCGA TTTTTTCGATCGCTT TERM 831 604682 - 604705 + r 100 -14 -3.72453 | opp_overlap 604682 604675, overlap 604675 GAGATGAAGATGCAA TTCAGGCTAC CGAA GTAGCCTGAA TTTAAGATTATTGAT TERM 832 604705 - 604682 - R 86 -14 -3.21062 | opp_overlap 604675 604682, overlap 604675 GAGATGAAGATGCAA TTCAGGCTAC CGAA GTAGCCTGAA TTTAAGATTATTGAT yfbQ 605927 - 604713 - | aminotransferase AlaT TERM 833 606088 - 606102 + H 74 -3.6 -5.08178 | ATAAAATCATTTGTT TAGAAG TAT TTTCTA TTTTTGTCTGTATGT lrhA 606859 - 607794 + | NADH dehydrogenase operon transcriptional regulator TERM 834 607867 - 607834 - f 100 -7.4 -5.58209 | gap 1, opp_overlap 607834 GTAAATGTAAAAAAA GAGCCGCTG-GCGAT GAAAA AACGCTCAGTGGCTC TTTTTTGTGCCCATC TERM 835 607834 - 607867 + F 100 -9.6 -5.252 | gap 1, opp_overlap 607834 GTAAATGTAAAAAAA GAGCCGCTG-GCGAT GAAAA AACGCTCAGTGGCTC TTTTTTGTGCCCATC SPA0535 607874 - 608026 + | hypothetical protein TERM 836 608316 - 608334 + F 95 -2.4 -6.13503 | overlap 608317 608318 GCTGTTTTTATCATT TTCTACAG TAA TTGTAGGG TTTTTTTTATTCCTC TERM 837 608719 - 608733 + G 89 -2.8 -5.71295 | GCGGCTGGGTTGGCT TTGTGG AAG CTGCAA TTTTTATTTTTGTGT nuoA 608421 - 608864 + | NADH dehydrogenase subunit A TERM 838 608966 - 608943 - g 95 -11 -4.57073 | overlap 608960 TACCCCCTGCAAAAA CAGGAGATCG TAAC CGACCCCCTG GAGCAGGAAGTTAAC nuoB 608880 - 609542 + | NADH dehydrogenase subunit B TERM 839 609888 - 609912 + G 100 -9.1 -4.89729 | overlap 609889 609909 AACGCCTGCGTACGC ACCGTGACGGG TTA CCCGCCGCGGA TTTTTCCGTTTTCTA TERM 840 609889 - 609911 + G 85 -12.6 -3.5221 | overlap 609888 609909 ACGCCTGCGTACGCA CCGTGACGGG TTA CCCGCCGCGG ATTTTTCCGTTTTCT TERM 841 609909 - 609920 + G 73 -5.8 -4.37886 | overlap 609889 609888 ACGGGTTACCCGCCG CGGA TTTT TCCG TTTTCTACCACCTGA nuoC 609629 - 611431 + | bifunctional NADH:ubiquinone oxidoreductase subunit C/D nuoE 611434 - 611934 + | NADH dehydrogenase subunit E nuoF 611931 - 613268 + | NADH dehydrogenase I subunit F TERM 842 613477 - 613463 - g 70 -5.6 -4.46404 | GAAGCAATACCAAAA CGCGGA AGA TACGCG TGGTCGCCTGGTGAT TERM 843 614800 - 614784 - g 74 -2.1 -5.00616 | GCCGGCGCGAAAAAA CCGCTGA TTA TCTCCGG CACTAACGCCGGTAG nuoG 613293 - 616025 + | NADH dehydrogenase subunit G nuoH 616022 - 616999 + | NADH dehydrogenase subunit H nuoI 617014 - 617556 + | NADH dehydrogenase subunit I nuoJ 617567 - 618121 + | NADH dehydrogenase subunit J nuoK 618118 - 618420 + | NADH dehydrogenase subunit K TERM 844 619996 - 619962 - g 71 -9.9 -3.53012 | opp_overlap 619991, overlap 619963 619990 CTGTGGCTGGGTAAA CGCACGCTGGTGACG TCGAT CGCCAACAGCGCGCC GGGCCGTCTGCTGGG TERM 845 619995 - 619963 - g 79 -13.4 -2.71712 | opp_overlap 619991, overlap 619962 619990 TGTGGCTGGGTAAAC GCACGCTGGTGACG TCGAT CGCCAACAGCGCGC CGGGCCGTCTGCTGG nuoL 618417 - 620258 + | NADH dehydrogenase subunit L TERM 846 620718 - 620730 + G 70 -6.9 -4.18802 | CTGAATTTGTCCTGC CGTGG ATC CCGCG TTTTGGCATCTCTAT nuoM 620510 - 622039 + | NADH dehydrogenase subunit M TERM 847 622282 - 622312 + G 83 -11.8 -3.65351 | GCTCTACACCGGGCT GGTGCTGCTGGCGA GCC TCGCCACCTGTACC TTTGCCTACCCGTGG nuoN 622046 - 623503 + | NADH dehydrogenase subunit N TERM 848 623548 - 623519 - T 88 -12.3 -3.58577 | opp_overlap 623525, overlap 623525 GCAATAAGTAAAAAC GAAAAACCCGCTT CACG AAGCGGGTTTTTT ATTACCTGATGTCAT TERM 849 623542 - 623525 - T 100 -11.3 -5.1971 | opp_overlap 623525, overlap 623519 AGTAAAAACGAAAAA CCCGCTT CACG AAGCGGG TTTTTTATTACCTGA TERM 850 623525 - 623542 + T 100 -11.3 -5.4833 | opp_overlap 623519 623525 AGTAAAAACGAAAAA CCCGCTT CACG AAGCGGG TTTTTTATTACCTGA SPA0549 624648 - 623644 - | putative receptor/regulator protein elaC 625631 - 624714 - | ribonuclease Z TERM 851 626035 - 626056 + G 72 -2.1 -4.84017 | AGCCGCTATATCTGG GGGCGCAGG CGCA TCTGCAACC TTTTTATGCGCGGTT elaA 625692 - 626153 + | hypothetical protein TERM 852 626455 - 626445 - g 81 -6.8 -4.72986 | opp_overlap 626445 TACGTTCATGAAAAA CCCT GGC AGGG TATTGGCGTAGGCGC elaB 626202 - 626513 + | hypothetical protein TERM 853 626576 - 626592 + F 78 -6.5 -4.56597 | opp_overlap 626553 626551 626550, overlap 626550 626539 TTTTTTAGGGCAGTA CCCCGTA TAA TGTGGGG TTTTTAACAGGGAGG TERM 854 627472 - 627453 - g 74 -2.1 -5.00846 | opp_overlap 627453 GAAAGACGATAAAAA CCAGC GAGAAAATAT GCTGG TTGTCGAAGACATCT TERM 855 627645 - 627671 + G 71 -5.8 -4.30995 | gap 1 GCCTACCGCAGCGGT CGC-CGGGATC CCTCGT GAACCCGCGCG TTGTTTTATAGAACA menF 626614 - 627909 + | menaquinone-specific isochorismate synthase menD 627995 - 629665 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase yfbB 629662 - 630420 + | acyl-CoA thioester hydrolase YfbB menB 630435 - 631292 + | naphthoate synthase TERM 856 631873 - 631894 + G 77 -11.5 -3.57144 | opp_overlap 631865 631875 CGAAGAACCGTGTAA GACGCGGGA TGAT TCCCGCGCC TTTGCCCGTGAAACC TERM 857 631892 - 631875 - g 81 -12.7 -3.05066 | opp_overlap 631873, overlap 631865 AAGAACCGTGTAAGA CGCGGGA TGAT TCCCGCG CCTTTGCCCGTGAAA menC 631292 - 632254 + | O-succinylbenzoate synthase menE 632251 - 633618 + | O-succinylbenzoic acid--CoA ligase pmrD 633716 - 633973 + | polymyxin B resistance protein SPA0560 634345 - 633968 - | hypothetical protein SPA0561 634680 - 634345 - | hypothetical protein arnT 636323 - 634677 - | 4-amino-4-deoxy-L-arabinose transferase TERM 858 636127 - 636137 + g 71 -4.6 -4.59773 | CTGTTTATCCAGTAA CCGG CTA TCGG TTTTTCAAAATAACG SPA0563 637219 - 636320 - | hypothetical protein yfbG 639198 - 637216 - | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase pmrF 640178 - 639195 - | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase yfbE 641320 - 640181 - | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase TERM 859 640810 - 640828 + g 83 -10.2 -3.95153 | opp_overlap 640799 640800, overlap 640823 AAATCGCGGTGCCCC GGGCGCCA ATG TGGCGACC TTTGTAGCTGGTTCC ais 641619 - 642224 + | Ais protein TERM 860 642264 - 642245 - T 76 -9.3 -3.76413 | opp_overlap 642244 642241 TGTTAAAAGCGTAAA GACAGCC TGAAGC GGCTGTC GTCATTATAATAACC yfaO 642694 - 642269 - | hypothetical protein TERM 861 642774 - 642784 + H 91 -6.8 -5.61689 | opp_overlap 642774 AAATGGAAGCGATAA CGCA GAC TGCG TTTTTTGTTAATTTT yfaZ 642868 - 643515 + | hypothetical protein TERM 862 643493 - 643508 + F 82 -6.8 -4.77036 | overlap 643494 CTGACGGCCTTTATG TTGGCG TAAA CGCCAG TTTTTGATGCTAACG TERM 863 643523 - 643542 + F 78 -12.8 -2.54344 | overlap 643522 643520 GTTTTTGATGCTAAC GGCGCGGC AATC GTCGCGCC ATATTCCTCCTTTTC TERM 864 644129 - 644144 + G 74 -3.2 -4.96848 | gap 1, overlap 644129 AGAAGGAAATCTTAC CGCG-GT TAC GCGCGCG TTTTTCTCTGCCGGA TERM 865 644422 - 644391 - g 74 -7.2 -4.21275 | gap 1, opp_overlap 644416, overlap 644384 TGAAGGTACGGAAAA CCTGCCGGC-GCAAA TAG CCCGCCGCCTGCAGG AAAGGCAGTTGAGTC SPA0570 643630 - 644826 + | competence damage-inducible protein A yfaX 645076 - 645858 + | putative transcriptional regulator yfaW 645860 - 647077 + | putative MR-MLE-family protein yfaV 647133 - 648422 + | putative transport protein TERM 866 649066 - 649088 + G 91 -7.6 -5.03314 | overlap 649068 649070 TGTATTTATCGTATT CGCGCCGC CGGAAAA GCGGCGGG TTTTTTGGCGGTCGA TERM 867 649070 - 649087 + G 71 -9.8 -3.61506 | overlap 649068 649066 TTTATCGTATTCGCG CCGCCG GAAAAG CGGCGG GTTTTTTGGCGGTCG SPA0574 648448 - 649251 + | putative aldolase TERM 868 649269 - 649258 - g 83 -5.8 -4.88067 | opp_overlap 649267 AGTTATTGAGAAAAA TGCC GGAT GGCA CGTATGCCTTACGCG SPA0575 649257 - 649433 + | hypothetical protein TERM 869 649443 - 649463 + T 93 -15.5 -2.9248 | overlap 649441 GCATAGAACTTTTAG TGGGAAGGC CTG GCCTTCCCA TCCTTATATACTTAT SPA0576 650473 - 649520 - | deubiquitinase SPA0577 650666 - 650463 - | hypothetical protein TERM 870 650635 - 650650 + g 80 -4.7 -5.00467 | opp_overlap 650630 650635, overlap 650630 GGGAAATATATTAAA TCAGG CATAGA CCTGA TTTTATTATTATTCA TERM 871 650962 - 650938 - R 77 -11.3 -3.29471 | opp_overlap 650940, overlap 650939 TGGTGAGTAGAGTAA TGGCGCCGGAG GGG CTCCGGCGCTT TTTACTTAGCCGAGC TERM 872 650961 - 650939 - R 86 -14.8 -2.57468 | opp_overlap 650940, overlap 650938 GGTGAGTAGAGTAAT GGCGCCGGAG GGG CTCCGGCGCT TTTTACTTAGCCGAG TERM 873 650940 - 650960 + r 100 -18.3 -4.8622 | opp_overlap 650939 650938 GTGAGTAGAGTAATG GCGCCGGAG GGG CTCCGGCGC TTTTTACTTAGCCGA glpC 652158 - 650968 - | sn-glycerol-3-phosphate dehydrogenase subunit C glpB 653414 - 652155 - | anaerobic glycerol-3-phosphate dehydrogenase subunit B TERM 874 652775 - 652814 + g 78 -2.1 -5.2204 | gap 1, overlap 652777 TGATCATGTCGCAGT TTGTCGCTATTG-GCGAC AGCGC GTCGTACAGCAGCGGCCA TTTTTCTTCGTTATC glpA 655032 - 653404 - | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 875 654955 - 654941 - G 70 -9.2 -3.7456 | opp_overlap 654953 AGAATGACACGTAAA CCGCGC AGC GCGCAG TCGCGGGCGATCCCT TERM 876 655011 - 655025 + g 86 -7.8 -4.70739 | overlap 654990 TAATCACGTCACTTG CTTGCG AGT CGCGAG TTTTCATTGTTTTTC TERM 877 655569 - 655584 + G 71 -6 -4.25104 | opp_overlap 655553 GGTTCGGTGTCCGAT CGCTCG AATC CGCGCG TTTTCCTGCCGGCAG TERM 878 656458 - 656442 - g 77 -3.5 -5.00616 | opp_overlap 656414 656444, overlap 656443 CTGGCGCCGAAAAAA GCGGCGG GTA CGGCGGC GGGCTTTACCGGTCT glpT 655305 - 656663 + | sn-glycerol-3-phosphate transporter TERM 879 656887 - 656868 - g 100 -13.6 -3.97947 | opp_overlap 656857 TTTAGTGATGACAAA GGACGACC ATCT GGTCGTCC TCCATGACCACTACC glpQ 656668 - 657738 + | glycerophosphodiester phosphodiesterase TERM 880 657753 - 657805 + T 72 -9 -3.54543 | opp_overlap 657761 AAGGTTTGCCATAGT CGAAGTGACGCGCCGGATGAGG GCATAAACG CCTCATCCGGCCTGGCGCAACG TTTGCCAGCGTAAGT SPA0583 658732 - 657854 - | putative transcriptional regulator SPA0584 658894 - 660084 + | putative transmembrane transport protein TERM 881 660110 - 660135 + T 93 -16.3 -2.87931 | GATTTCGATATCGCC TTTTGCCCTGC AGCA GCAGGGCAAAA TCTCTCCCGGCTGGA yfaE 660340 - 660086 - | 2Fe-2S ferredoxin YfaE nrdB 661470 - 660340 - | ribonucleotide-diphosphate reductase subunit beta TERM 882 661546 - 661578 + r 86 -13.6 -3.18735 | gap 2, opp_overlap 661543 661544 CAAACCGTACAATCG TAG-GCCGGGTAG-GC ATA GCACTACCCGGCACTA TTCATCAGATCTTAC nrdA 663868 - 661583 - | ribonucleotide-diphosphate reductase subunit alpha TERM 883 662133 - 662143 + g 70 -6.8 -4.20084 | TTGTAGGTGTCGATC GGCA AAA TGCC TTTTGCATAGGTGGT TERM 884 664144 - 664134 - R 100 -4 -6.24157 | ATTCATAAAAAAAAA TCAA AAC TTGA TCGAATGCTGATTTC TERM 885 664201 - 664175 - R 83 -9.4 -4.21607 | opp_overlap 664175, overlap 664200 TTCATCGAAGAGAAA GGTTGCGCCCGA TGA TCTAACGCAACC CTTATAGGAAAATTC ubiG 664952 - 664224 - | 3-demethylubiquinone-9 3-methyltransferase TERM 886 665045 - 665067 + r 79 -10.6 -3.48395 | overlap 665032 665031 665046 CTTTATTACGCTTTC AGCGCAAGAA GTT TTCTTGCGCG TTCTGTAAAACCGCT TERM 887 665046 - 665066 + r 83 -14.1 -2.68823 | overlap 665032 665031 665045 TTTATTACGCTTTCA GCGCAAGAA GTT TTCTTGCGC GTTCTGTAAAACCGC SPA0589 665730 - 665035 - | hypothetical protein TERM 888 665118 - 665128 + g 76 -3.2 -5.07567 | opp_overlap 665112 665108, overlap 665112 AATTACAGACGCCCT CGAC GTT GTTG TTTTTTAACATATCC TERM 889 665298 - 665283 - G 72 -2.6 -4.8667 | CATATTTCACAAAAA CATAAT GAAA ATCATG ATCCAGTTTGAGGTA TERM 890 665700 - 665720 + g 70 -6.9 -4.17748 | overlap 665703 TTTCAATTGATATGT GACTAAAGC CAC GCTTTAATC TATTTTTCATTTTCT SPA0590 665969 - 667294 + | hypothetical protein SPA0591 667309 - 668511 + | putative MR-MLE-family protein gyrA 668921 - 671557 + | DNA gyrase subunit A TERM 891 671574 - 671591 + F 100 -14.1 -5.29846 | GTTATTGCTGTGCGA GGGCCGG ATAT CCGGCCC TTTTTCTTTGCCGTT TERM 892 672973 - 672992 + G 71 -8.6 -3.77831 | CGTCCATTCCCGCTA TCGCAATG AAAA CGTTGCGA TTTGCGTGTTGGTAG rcsC 671675 - 674521 + | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 893 674540 - 674526 - T 75 -2.7 -5.24129 | opp_overlap 674526, overlap 674527 CGCGGGCATAAAAAA TGCCG GATGG CGGCG TTGCCTGTCCGGCTT rcsB 675274 - 674624 - | transcriptional regulator RcsB TERM 894 674815 - 674853 + g 77 -7.5 -4.36914 | gap 1, overlap 674818 ATACTTCGCTCTCTT TTGGCGACAGGCGCTTAT CGCC GTAACCGCCTG-CGCTGA TTTTCTCCAGCAGAC yojN 677960 - 675291 - | phosphotransfer intermediate protein in two-component regulatory system with RcsBC TERM 895 677914 - 677899 - G 71 -4.6 -4.58786 | AGCAATAAGAAGAAA CGGGTA ATGC TTCCCG GTAGAAGGGAGAATC TERM 896 678289 - 678271 - H 100 -13.2 -5.82388 | AAAGGGTAAAAAAAA CCGAATGC GAA GCATTCGG TTGAAATAGGGGTAA TERM 897 678374 - 678385 + H 79 -3 -5.37345 | CACTATTTTAGTTGC GAAT GAAG ATTC TTTTTTATCATTCAG ompC 678689 - 679825 + | outer membrane porin protein C TERM 898 679847 - 679860 + F 100 -9.5 -5.18357 | opp_overlap 679847 AAAGATGTTGCTAAA GGGCC TGCG GGCCC TTTTTTCATGCCTTA TERM 899 679860 - 679847 - f 75 -9.5 -3.55815 | opp_overlap 679847 AAAGATGTTGCTAAA GGGCC TGCG GGCCC TTTTTTCATGCCTTA TERM 900 680407 - 680423 + G 71 -10.9 -3.28924 | opp_overlap 680406 680405 AAAAGCGAAAACAGG CCTGCAA CAT TTGCAGG TTATCGACAGGGCTG yojL 679940 - 680992 + | thiamine biosynthesis lipoprotein ApbE TERM 901 681159 - 681178 + G 74 -2.1 -5.01732 | gap 1, overlap 681160 681160 681175 TGGGCGTTTCGTTTT TG-CGGTG CGAAC CACCGGCG TTTTTTGCCGCCCTT TERM 902 681395 - 681425 + G 73 -6.1 -4.41348 | overlap 681391 CGTCTCTGGCGCAGG CGGTGGCGATGAG CCCGT TTCATCTGCACCG TTTGTTTAAAGCGAG ada 681073 - 682134 + | ADA regulatory protein alkB 682137 - 682787 + | AlkB protein TERM 903 683004 - 682990 - g 79 -11.4 -3.64822 | overlap 683002 AGCGCCTGATTGAAA CGGTGG ACA CCACCG TCATGGTGCTGCCGG TERM 904 683906 - 683918 + G 74 -3.3 -4.8622 | overlap 683905 CCTGACGATTCACCG CGGCG AAC TGCTG TTTTTAATTGGCGGC TERM 905 684240 - 684230 - g 100 -8.2 -5.49809 | opp_overlap 684235 GAAAGGGCAAAAAAA GCGC ATT GCGC TGCTGCTGGCGCTGG yojI 682863 - 684506 + | multidrug transporter membrane component/ATP-binding component eco 685209 - 684715 - | ecotin precursor napF 685623 - 686114 + | ferredoxin-type protein yojF 686104 - 686367 + | assembly protein for periplasmic nitrate reductase TERM 906 687984 - 687960 - g 71 -7.2 -4.06419 | gap 2, overlap 687961 TGGGTTGAGAAAGAA GGCGCTTACGGC AAC GCCG-AA-CGCC GCACGCAGTTCTGGC napA 686364 - 688850 + | nitrate reductase napG 688857 - 689552 + | quinol dehydrogenase periplasmic component TERM 907 689663 - 689676 + G 73 -5.9 -4.43272 | GGATGTTTCTCAGCG GCCCG TGGC TGGGC TTTTGGGTTTTGCAT napH 689539 - 690408 + | quinol dehydrogenase membrane component TERM 908 690868 - 690882 + G 70 -7 -4.09117 | TAAAGTGTCGGGCAA CGTCGC GCC GCGTCG TTATTTCTGCCTGCA napB 690524 - 690973 + | diheme cytochrome c550 napC 690983 - 691585 + | cytochrome c-type protein NapC TERM 909 691769 - 691727 - g 75 -6 -4.56775 | opp_overlap 691735 ACGGCGCCGGAAAAA CCACCCTGCTGCGCCTGC TGACCGG GCTGGCGCGCCCGGACGG CGGCGAGGTGTACTG TERM 910 691735 - 691777 + G 76 -12.6 -2.78384 | gap 1, opp_overlap 691727 GGAAAAACCACCCTG CTGCGCCTGCTGACCGGGC TGGCGC GCCCGGACGGC-GGCGAGG TGTACTGGCAGGGCG TERM 911 691880 - 691865 - g 78 -6 -4.83169 | opp_overlap 691876 691878, overlap 691867 AGCCGGGGATAAAAA CCCGCC TGAC GGCGCG GGAGAACCTGCACTT TERM 912 691876 - 691893 + G 71 -4.7 -4.56597 | opp_overlap 691867 691865, overlap 691878 AAAACCCGCCTGACG GCGCGGG AGAA CCTGCAC TTTTTCCACCCCGGC ccmA 691606 - 692223 + | cytochrome c biogenesis protein CcmA ccmB 692223 - 692879 + | heme exporter protein B1 TERM 913 693515 - 693554 + G 83 -12.8 -3.25304 | gap 1, opp_overlap 693511, overlap 693506 693516 GCAGCAGAGTATCGA CCCGGCGATGCGCTCGCCG CTG CGCTGGGC-CATCGCCGGC TTCCTGCTGCTCTTT TERM 914 693516 - 693553 + G 89 -16.3 -2.54459 | gap 1, opp_overlap 693511, overlap 693515 693506 CAGCAGAGTATCGAC CCGGCGATGCGCTCGCCG CTG CGCTGGGC-CATCGCCGG CTTCCTGCTGCTCTT ccmC 692931 - 693668 + | heme exporter protein C1 TERM 915 693683 - 693693 + G 76 -3.2 -5.03314 | AGTCCGGCATTTTCA TCGT GGA GCGA TTTTTTCGCCATGGG TERM 916 693707 - 693718 + G 100 -7.2 -5.38047 | GATTTTTTCGCCATG GGCG GGTA CGCC TTTTTTGTCTGGCTG ccmD 693665 - 693877 + | heme exporter protein D1 ccmE 693874 - 694353 + | cytochrome c-type biogenesis protein CcmE ccmF 694350 - 696281 + | cytochrome c-type biogenesis protein F1 dsbE 696278 - 696835 + | thiol:disulfide interchange protein TERM 917 697215 - 697261 + G 100 -15.6 -3.53012 | overlap 697239 CGTCGCCCGGACGCG CCGGCGGGTGCGCCTGCGCCGG GAG CCGCTGCCGGCGGACACCCCGG TTTGCGGCGCGCGCG TERM 918 697618 - 697608 - g 87 -8.2 -4.62069 | TCTGGACCCGAAAAA CCGC GAT GCGG CGCTGGGCTACGCGG ccmH 696832 - 697875 + | cytochrome c-type biogenesis protein H1 TERM 919 697921 - 697876 - T 83 -9.5 -4.11183 | gap 1, opp_overlap 697882 697885, overlap 697878 697879 GCGCAGGAGAAATAA GACCCTGAC-GGCCCGGTGGCG TGG CGCCACCGGGCCTGGCTTGTTA CTGCATTCCGCGTGT TERM 920 697919 - 697878 - T 86 -12.1 -3.64882 | gap 1, opp_overlap 697882 697885, overlap 697876 697879 GCAGGAGAAATAAGA CCCTGAC-GGCCCGGTGGCG TGG CGCCACCGGGCCTGGCTTGT TACTGCATTCCGCGT TERM 921 697918 - 697879 - T 93 -15.6 -2.78206 | gap 1, opp_overlap 697882 697885, overlap 697878 697876 CAGGAGAAATAAGAC CCTGAC-GGCCCGGTGGCG TGG CGCCACCGGGCCTGGCTTG TTACTGCATTCCGCG TERM 922 697882 - 697915 + T 100 -20.3 -3.75105 | gap 1, opp_overlap 697879 697878 697876, overlap 697885 GAGAAATAAGACCCT GAC-GGCCCGGTGGCG TGG CGCCACCGGGCCTGGC TTGTTACTGCATTCC TERM 923 697885 - 697911 + T 100 -25.2 -2.67428 | opp_overlap 697879 697878 697876, overlap 697882 AAATAAGACCCTGAC GGCCCGGTGGCG TGG CGCCACCGGGCC TGGCTTGTTACTGCA narP 698566 - 697919 - | transcriptional regulator NarP TERM 924 698696 - 698686 - H 74 -6.8 -4.3534 | opp_overlap 698690 GGGTAAGTAGTAAAA CCTG TGA CAGG CGAGTCATTAGCTGA SPA0619 699599 - 699859 + | hypothetical protein SPA0620 700255 - 700052 - | homolog of virulence protein msgA TERM 925 700280 - 700263 - R 100 -9.1 -5.64274 | opp_overlap 700263 GCAGGCATAAAAAAA CCAGCCC TGAG AGGCTGG TTTTTAAGGGGAATT TERM 926 700263 - 700280 + r 84 -8.4 -4.57341 | opp_overlap 700263 GCAGGCATAAAAAAA CCAGCC CTGAGA GGCTGG TTTTTAAGGGGAATT yejM 702200 - 700440 - | putative sulphatase TERM 927 701692 - 701673 - G 72 -2 -4.85177 | overlap 701676 701677 701678 AAAGGAGACGAAAAA GAATGCCG CAAG CGGCCTTG CGAAATGGCGGCGGC TERM 928 701697 - 701676 - G 70 -5.1 -4.50988 | overlap 701673 701677 701678 GGAGACGAAAAAGAA TGCCGCAAG CGGC CTTGCGAAA TGGCGGCGGCGCGTG TERM 929 701703 - 701724 + g 70 -6.5 -4.09864 | gap 1 CCTTGCGAAATGGCG GCGGCGC-GT GAG ACTGCGCAGC TTTTGCCAACTCCAT yejL 702459 - 702232 - | hypothetical protein yejK 702639 - 703646 + | nucleoid-associated protein NdpA TERM 930 703736 - 703751 + G 72 -4 -4.8083 | gap 1 TCGGCAGGTTTTGTA TGCGCAC ATT GT-CGCA TTTTTGATGATGTTG SPA0625 703674 - 704294 + | hypothetical protein TERM 931 704388 - 704357 - T 78 -12.4 -2.71246 | opp_overlap 704365, overlap 704365 ATTCAATTAAACGCA TAAAAAAACCCCGC CGGG GCGGGGTTTTTCTT CAACTTCCAGGCGAT TERM 932 704365 - 704380 + T 100 -11.8 -5.10208 | opp_overlap 704365 704357 AAACGCATAAAAAAA CCCCGC CGGG GCGGGG TTTTTCTTCAACTTC TERM 933 704380 - 704365 - T 100 -11.8 -5.68039 | opp_overlap 704365, overlap 704357 AAACGCATAAAAAAA CCCCGC CGGG GCGGGG TTTTTCTTCAACTTC rplY 704687 - 704403 - | 50S ribosomal protein L25 yejH 706572 - 704812 - | putative helicase TERM 934 706676 - 706692 + H 72 -8.7 -3.81258 | AGCAATTCCCTTTTT TCGGGTA GAA TGCCCGA TTTCCGTATTATTAC yejD 706724 - 707419 + | 16S rRNA pseudouridylate synthase A TERM 935 708029 - 708007 - g 75 -11.2 -3.44848 | opp_overlap 708005 708005, overlap 708005 TGCTCTGATTAAAGA GACGCTGCCC GTT GAGCGGCGTC AGCCTTTTCATATTC bcr 707447 - 708637 + | bicyclomycin/multidrug efflux system SPA0630 708634 - 708732 + | hypothetical protein yejG 709028 - 709372 + | hypothetical protein yejF 710965 - 709376 - | putative ABC-transporter ATP-binding protein TERM 936 709972 - 709989 + g 71 -4.8 -4.60487 | opp_overlap 709963 709972 GGATAAGCCGTAACA GCGCCA GACCGG TGGTGC TTTTTCCCGATCCTG TERM 937 710609 - 710626 + g 73 -5.5 -4.59109 | opp_overlap 710623 TCCCCGATGGAGCGA CAGCACT TCAT AGAGCTG TTTTTCCAGCGTATG TERM 938 711011 - 710991 - R 72 -8.1 -3.80573 | CTTAGCAGGATCAAA GGCGTCGCG TAC CGCTTCGCC GATAAAAATCAGCAG yejE 711992 - 710967 - | putative binding-protein-dependent transporter yejB 713086 - 711992 - | putative binding-protein-dependent transporter TERM 939 712399 - 712371 - G 86 -10.9 -4.08767 | opp_overlap 712375 GTCAGGGCGGCAAAA CCGCCGATGACGG TCG CCAACACCGGCAG CGTAATATGCCACAA yejA 714901 - 713096 - | putative transport system periplasmic binding protein TERM 940 714818 - 714832 + g 77 -8.6 -4.10552 | TTCGCCGAGTACGGC GAAAGC GTA GCTTTC TTTGATTTCCTGGGC rtn 716564 - 715008 - | hypothetical protein TERM 941 716649 - 716675 + r 74 -10.2 -3.22475 | overlap 716647 716650 TACCCCGGATAGTCA TGCTTTTCTGTG ATG CGCAGGAAAGCG TATTGTCGCAGTAGC TERM 942 716650 - 716674 + r 73 -11.5 -2.53271 | overlap 716649 716647 ACCCCGGATAGTCAT GCTTTTCTGTG ATG CGCAGGAAAGC GTATTGTCGCAGTAG TERM 943 716822 - 716837 + r 100 -9 -5.40625 | opp_overlap 716822 716816 GATAATAAGCAAAAA CACTGC CGAA GCAGTG TTTTTTATGTCGTCT TERM 944 716837 - 716822 - R 100 -9 -5.01845 | opp_overlap 716822, overlap 716816 GATAATAAGCAAAAA CACTGC CGAA GCAGTG TTTTTTATGTCGTCT TERM 945 716914 - 716928 + r 72 -2.8 -5.0538 | GCTCAGAACTCGACG CGCT TCATTAT AGCG TTTTTTCCAGTACGG spr 717462 - 716890 - | putative outer membrane lipoprotein TERM 946 717860 - 717825 - R 89 -11.4 -4.01853 | opp_overlap 717823 717825 GAATATCATCATAAA TTACCTTCAACGAT GTAAAATT ATCGCTGAAGGTAA TGTTAATGGCATGGG TERM 947 717825 - 717860 + r 71 -9.9 -3.14602 | opp_overlap 717825, overlap 717823 GAATATCATCATAAA TTACCTTCAACGATG TAAAAT TATCGCTGAAGGTAA TGTTAATGGCATGGG yeiU 718589 - 717876 - | hypothetical protein yeiR 719611 - 718625 - | hypothetical protein TERM 948 719099 - 719151 + g 71 -4.6 -4.64676 | gap 1, overlap 719132 ACGATCGCCGTCGTA CTGTCGCCACCACTGTTGCAGGGCG GCAT CGCTCTGCGCC-GTGGCGCGGTCGG TTTTATTGGCGATGA TERM 949 719795 - 719781 - R 82 -5.6 -5.10665 | overlap 719782 719783 AGTCAATAAATAAAA GGGGCA GAC TGCGCC CTGGGGCGCAGCCGA yeiP 720395 - 719823 - | elongation factor P TERM 950 720198 - 720224 + g 89 -13.8 -3.59247 | overlap 720190 GCCGCGACGGCTCAG GGTGACGGTATC AAC GATATCGTCGCC TTTGAAACGTTCTTC SPA0641 720934 - 720530 - | hypothetical protein TERM 951 720644 - 720662 + g 85 -4.6 -5.27335 | overlap 720660 CTGATCATGATGACG TCCACATT TTA AATCTGGA TTTTTCTTTGGACAA SPA0642 721513 - 721635 + | hypothetical protein TERM 952 722094 - 722074 - g 72 -2.6 -4.83615 | TAGTGTGCATAAAAA TATGTTAC AAACG GAAACATA TGCAAAGCTATCATT SPA0643 721637 - 722302 + | hypothetical protein yeiO 723548 - 722367 - | sugar efflux transporter TERM 953 722653 - 722628 - G 87 -13.3 -3.18681 | overlap 722629 CTGCAAGCCGAGCAA CGTTGCCGGCG TGTG CGCCAGCAACA TCCCCGCATAAAAGC TERM 954 722652 - 722629 - G 81 -14.6 -2.50994 | overlap 722628 TGCAAGCCGAGCAAC GTTGCCGGCG TGTG CGCCAGCAAC ATCCCCGCATAAAAG TERM 955 723717 - 723695 - H 93 -6.2 -5.64421 | opp_overlap 723695 AGCTGAAAGAAAAAA GCTGAAGCCT TTT ATGCGTCAGC TATTGAGGGGCTGTT TERM 956 723830 - 723865 + H 86 -2.7 -5.67967 | gap 2 TCTTGAAACGTTTCA GCGC-GATCTG-GTTTT TTTG ACAACTCAGATTGGCGC TTTTTTTCTCATAGT TERM 957 724016 - 723990 - g 71 -10.1 -3.55563 | gap 1, opp_overlap 723977, overlap 723977 723976 AGGCCATCCGGCAAA TCGCCGCC-GCG TTAG CGCAGGCGGGGA ATGTGGCGGGCGGCT fruB 723917 - 725047 + | bifunctional fructose-specific PTS IIA/HPr protein fruK 725047 - 725985 + | 1-phosphofructokinase fruA 726002 - 727690 + | fructose-specific PTS system IIBC component TERM 958 727736 - 727699 - T 95 -12.9 -3.6944 | opp_overlap 727709 727734, overlap 727709 GGCGTAAGAGAAACA CGCTAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTATTG CCTGAGCGTCAGGCC TERM 959 727709 - 727726 + T 100 -11.3 -5.4833 | opp_overlap 727699 727709 AAACACGCTAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTATTGCCTGA TERM 960 727726 - 727709 - T 100 -11.3 -5.10077 | opp_overlap 727709, overlap 727699 AAACACGCTAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTATTGCCTGA nfo 728602 - 727745 - | endonuclease IV TERM 961 728182 - 728210 + g 71 -10.3 -3.21912 | overlap 728185 TTTCGATAACCGCCG TAACGCCCTCG GTCTGCG CGAGGGCGATA TTGATAGATTCCGCG TERM 962 728185 - 728207 + g 71 -12 -2.5007 | overlap 728182 CGATAACCGCCGTAA CGCCCTCG GTCTGCG CGAGGGCG ATATTGATAGATTCC TERM 963 728307 - 728344 + g 83 -7.8 -4.58283 | gap 1, overlap 728297 GTTAAGCCGAGTTGT TCACAGCGCTGCATTTC ATCGA GAAAGGCATCGC-GTGA TTTTTCCAGCGCTTC TERM 964 728529 - 728512 - G 70 -7 -4.07568 | overlap 728520 GGTTTTTTGTGAAAA GCGCAA AGGCCG TTGCGC CAATTTCAGCCGCGC yeiH 729730 - 728681 - | hypothetical protein TERM 965 728764 - 728779 + g 76 -3.2 -5.09225 | CCAGCGCCATCAGCA GCGG TTTCGCCC CCGC TTTTTTCAATGCGCT yeiE 729851 - 730714 + | putative DNA-binding transcriptional regulator TERM 966 730736 - 730749 + F 71 -3.7 -4.80882 | opp_overlap 730727, overlap 730727 730737 AGAGGAGGGCTGCCC GGGCG GCAT CGCCA TTTTTAGTATCCGCT TERM 967 731046 - 731059 + G 74 -3.1 -4.92791 | gap 1, overlap 731039 TTTCTCAGGCGGGGC CAGGCG GCG CGC-TG TTTTCTTATATTCTG TERM 968 731938 - 731948 + G 71 -8.2 -3.85698 | overlap 731937 CCGCGGCGGCGTACC GCGC AAT GCGC TTTATGCCACCACCG lysP 730904 - 732373 + | lysine transporter TERM 969 732450 - 732467 + F 100 -11.3 -6.07374 | ACCTGACCCTTCTAA CCCTCTC ATTC GAGAGGG TTTTTTGTTTTTTCT cirA 732718 - 734709 + | colicin I receptor TERM 970 734712 - 734752 + T 77 -10.3 -3.30124 | opp_overlap 734716, overlap 734714 734715 TTACCGTTTCTGACA GAGACTGGCGACAGCCGCG TTT TGCCGCTGTCGCCAGAATG TTATAACCGATGCAG TERM 971 734714 - 734750 + T 83 -12.9 -3.21924 | opp_overlap 734716, overlap 734712 734715 ACCGTTTCTGACAGA GACTGGCGACAGCCGCG TTT TGCCGCTGTCGCCAGAA TGTTATAACCGATGC TERM 972 734715 - 734749 + T 95 -16.4 -2.5294 | opp_overlap 734716, overlap 734714 734712 CCGTTTCTGACAGAG ACTGGCGACAGCCGCG TTT TGCCGCTGTCGCCAGA ATGTTATAACCGATG TERM 973 734748 - 734716 - T 100 -19.2 -2.98823 | opp_overlap 734715 734714 734712 CGTTTCTGACAGAGA CTGGCGACAGCCGC GTTTT GCCGCTGTCGCCAG AATGTTATAACCGAT SPA0653 736075 - 734753 - | hypothetical protein SPA0654 736995 - 736108 - | putative hydrolase SPA0656 738584 - 738973 + | putative DNA-binding protein yeiG 739819 - 738962 - | putative esterase folE 740149 - 740817 + | GTP cyclohydrolase I TERM 974 741602 - 741620 + G 90 -12.4 -3.9461 | ATGGCGGCTGGACTG GGCGTACC GCT GGTGCGCC TTCTTATTGCAGGCG yeiB 740832 - 741974 + | hypothetical protein galS 742124 - 743146 + | DNA-binding transcriptional regulator GalS TERM 975 743175 - 743192 + F 72 -6.3 -4.21989 | overlap 743176 GTAACCGTTTTCAAT CTGTGAG TAAA TTCACAG TTTATTAACATTGTG TERM 976 744542 - 744526 - g 91 -10.1 -4.57569 | CGATCTGGCGAAAAA CCTCGCC GAA GGCAAGG GCGCGGCTGACGGCA mglB 743645 - 744643 + | D-galactose-binding periplasmic protein precursor TERM 977 746275 - 746257 - f 79 -8.2 -4.25052 | opp_overlap 746255 746257 746258, overlap 746251 746258 ATACTAAAACAACAA CGCAAAAC GAA ATTTTGCG TCTTGCTTCTTTGCA mglC 746313 - 747323 + | beta-methylgalactoside transporter inner membrane component TERM 978 747356 - 747384 + T 74 -10.2 -3.14211 | gap 1, opp_overlap 747357 TTTGCTTATCAGATA ACCCGGCGCAGCG AAAC TGC-GCGCCGGGC TTCATACCGCGAGCT TERM 979 747383 - 747357 - T 90 -13 -3.54475 | gap 1, opp_overlap 747356 TTGCTTATCAGATAA CCCGGCGCAGC GAAACT GC-GCGCCGGG CTTCATACCGCGAGC TERM 980 747395 - 747418 + T 71 -3.9 -4.77925 | gap 2 CGGGCTTCATACCGC GAGCTACAGCG TTAA CGC-GT-GCTC TTTTTCGCCTTTTTT yeiA 748633 - 747398 - | dihydropyrimidine dehydrogenase TERM 981 748145 - 748159 + g 71 -4.2 -4.58283 | opp_overlap 748137 AGATGAACCGCGTTT TACGGC GCG GCAGTA TTTTTCAACCAGTTC SPA0665 749868 - 748627 - | putative oxidoreductase TERM 982 749376 - 749401 + g 71 -7.5 -3.99327 | overlap 749387 ATGCCGGGATGCCGT GACGCAGCC ATCCGCCG GGCTGCGGC TGTTTTTCGTAAATG TERM 983 749387 - 749403 + g 76 -5 -4.75372 | overlap 749376 CCGTGACGCAGCCAT CCGCCG GGCTG CGGCTG TTTTTCGTAAATGGT SPA0666 750318 - 750073 - | hypothetical protein sanA 751034 - 750315 - | hypothetical protein TERM 984 750443 - 750433 - G 95 -8.2 -5.00884 | opp_overlap 750433 AGCGGGCCTAAAAAA CGCG GTT CGCG TTTAAAAATATAGAG cdd 752095 - 751211 - | cytidine deaminase yohK 752944 - 752249 - | hypothetical protein TERM 985 752896 - 752871 - G 86 -10.3 -4.14511 | AACGGCATTTTAAAA TGCGCCGCCAG TCGG CGGGCGGCGAA AAATACCGCCAGCGT TERM 986 752919 - 752900 - G 75 -6.4 -4.56597 | GCGGGCGGCGAAAAA TACCGCCA GCGT CAGCGGTA ACGACCACCAGATAT yohJ 753339 - 752941 - | hypothetical protein TERM 987 753283 - 753264 - G 84 -5.7 -5.10461 | GTGATGCAAGAAAAA TGCCTGC GTACAA ACAGGCA TAAATCAATACAAAA SPA0671 754379 - 753471 - | putative transcriptional regulator SPA0672 754505 - 755863 + | putative n-hydroxybenzoate transporter SPA0673 755875 - 756912 + | putative gentisate 1,2-dioxygenase SPA0674 756928 - 757629 + | FAA-hydrolase-family protein SPA0675 757638 - 758282 + | glutathione-S-transferase-family protein SPA0676 758297 - 759490 + | salicylate hydroxylase TERM 988 759556 - 759576 + F 100 -11.9 -5.58454 | opp_overlap 759558 TTTGCTCATCGCAGA GAGGCGTTA TGA TAGCGCCTC TTTTTTTGCTGTGGA TERM 989 759853 - 759838 - g 77 -8.2 -4.07568 | GTGGCTGGCGGAAAA CGCCGC GCGG GCGACG GCGTTGGGATCGTAT yohI 759599 - 760537 + | tRNA-dihydrouridine synthase C TERM 990 760592 - 760556 - T 77 -10.8 -3.30771 | overlap 760576 CTACAGCGTCCAGAA CGTGTGCCGGGCAG ATACTATCG CTGCCCGGCGCAGG AATCAGAAAATCATC SPA0678 760805 - 760608 - | hypothetical protein TERM 991 761494 - 761473 - g 87 -8.6 -4.58395 | TTTATGGGGGAAAAA CCGCGCTG AAGTTA CTGCGCGG ATCGGGGCGGTCAAA TERM 992 761947 - 761959 + G 73 -6.2 -4.39426 | GAGCAGCATTGACGC CGCG AAGGC CGCG TTTTATCCCGATATC yohG 760997 - 762433 + | multidrug resistance outer membrane protein MdtQ yohF 762499 - 763260 + | acetoin dehydrogenase TERM 993 763305 - 763262 - T 74 -5.8 -4.72188 | opp_overlap 763264 763269 763270 763293, overlap 763264 TCAACGCAAAATAAA CGCCGGGTGCCGGATGGC GGCGTTAT GCCATCCGGATACCATCG GGTTTAACGGGCCTC yohD 763905 - 763309 - | hypothetical protein TERM 994 763926 - 763941 + H 71 -6.8 -4.07885 | gap 1, opp_overlap 763936 CTGGCAAGAGGCGTG CG-CGGC AAA GCCGACG TTTTGCCGGAGACTA TERM 995 764114 - 764102 - g 73 -6.3 -4.44277 | GATCAAAAGCGAAAA CGAAA CCG TTTCG CATCACTATACGCAC yohC 764037 - 764624 + | hypothetical protein TERM 996 764671 - 764648 - f 71 -6.8 -4.07687 | gap 1, overlap 764636 764635 AGGGCTGGCGCAAAA GCCAGCA-ATG CAG CATTTGCTGAC GATTCTTCTGTAGCG TERM 997 765694 - 765678 - g 91 -6.5 -5.2197 | overlap 765688 765689 TATAAAAAGCAAAAA GCCGC GCAAATG GCGGC AGCCAGCGCCAGTGC pbpG 764790 - 765737 + | D-alanyl-D-alanine endopeptidase TERM 998 765749 - 765772 + T 78 -11.7 -3.04144 | gap 1, opp_overlap 765738 TTAAGTCGCCGCAGG CCCGGCAGGC ATCGC GCC-GCCGGG TATTCACGGTAAACC dld 767526 - 765796 - | D-lactate dehydrogenase TERM 999 766223 - 766203 - G 70 -9.7 -3.44146 | CGGCCTGATAACGAA TCGCCGC GCCAGCA GCGGCGA AGCGGTGCAGGAAGG TERM 1000 766286 - 766274 - G 75 -6.9 -4.48299 | opp_overlap 766273 766274 GTACAGGTAAAGAAA CCGCC CTC AGCGG ATTTAAAAAATTCAT TERM 1001 766760 - 766743 - G 71 -4.7 -4.66833 | overlap 766744 GGCGAACGGCAAAAA CCGCCAG TTTT CCGGCGC AGCCGGAAGATTCAA TERM 1002 767404 - 767382 - G 88 -11.2 -4.18164 | AACCCGGGAAAACAA CGGCCAGCGC GTC GCCCTGACCG GAACGGAAACCCTTG bglX 767793 - 770099 + | periplasmic beta-glucosidase precursor TERM 1003 770520 - 770543 + G 76 -3 -5.03314 | opp_overlap 770525 770527, overlap 770525 CTGGATATCTATCCG GAATACACCG GTAA CGGGGCGTTC TTTTTTAAAGATGAA TERM 1004 770930 - 770908 - g 83 -9.9 -4.15044 | gap 1, opp_overlap 770921 CCGCCGCGCAACAAA CATC-CGGCG TTAA CGCCGCGATG GCGTATGGTACCGAC yehZ 770280 - 771197 + | putative periplasmic protein TERM 1005 771424 - 771453 + G 81 -3.6 -5.22006 | gap 2 CCGGTAAACGCGGTA GCGTACTGACGCTG ATGA TGGCG-CAG-ACGC TTTTTATTGTCATGC yehY 771201 - 772370 + | putative permease transmembrane component TERM 1006 772970 - 772946 - g 72 -12.1 -2.80816 | TGGTGACGCATGACA TTGACGAGGCG TTA CGCCTCGCCGA CCATCTGGTGCTGAT yehX 772363 - 773310 + | ABC transporter ATP-binding protein yehW 773294 - 774025 + | putative permease transmembrane component SPA0690 774113 - 774006 - | hypothetical protein yehV 774904 - 774173 - | putative transcriptional regulator TERM 1007 774238 - 774248 + g 74 -6.8 -4.37092 | overlap 774231 774229 774227 GTTGCTGCTGCTGCG CCAG CGT CTGG TTTTCTCCGCACCAT TERM 1008 774304 - 774287 - G 71 -9.9 -3.53012 | CGTCTTGCCGTCAAA CAGTTCC GGGC GGAACTG GCTAAGCGAATGCGC TERM 1009 774960 - 774975 + H 79 -3.2 -5.31456 | CGCTCTTTTAGGAAC CAGGAA GTTT TGCCTG TTTTTTATGCATTAA yehU 775127 - 776812 + | putative two-component system sensor kinase yehT 776809 - 777528 + | putative two-component response-regulatory protein YehT yehS 777575 - 778042 + | hypothetical protein SPA0695 778629 - 778099 - | putative lipoprotein TERM 1010 778699 - 778713 + r 76 -4.2 -5.055 | overlap 778701 TTTGGCGAGGGGACT TACAGC GAG GCTGTC TTTTTTCGGAATTCA TERM 1011 778701 - 778711 + r 71 -6.8 -4.15235 | overlap 778699 TGGCGAGGGGACTTA CAGC GAG GCTG TCTTTTTTCGGAATT TERM 1012 778757 - 778738 - R 100 -11.4 -5.01553 | overlap 778753 AATTCATAAAGAAAA GACGCTGC CGAA GCAGCGCC CTGAGCGACTTTACC yehR 779259 - 778801 - | putative lipoprotein TERM 1013 779475 - 779492 + r 95 -12.7 -3.95647 | opp_overlap 779475, overlap 779468 TAAGCGGTTAAAAAA GCCGGAG CATG CTCCGGC TTGTTGCTTATTTTA TERM 1014 779492 - 779475 - R 100 -12.7 -5.03145 | opp_overlap 779475 779468 TAAGCGGTTAAAAAA GCCGGAG CATG CTCCGGC TTGTTGCTTATTTTA metG 781533 - 779500 - | methionyl-tRNA synthetase TERM 1015 779617 - 779605 - G 70 -9.1 -3.63627 | CTCGGAGACGCCAAA GCGCA TTT TGCGC GGCGCGAGGTTGGCG TERM 1016 781002 - 780964 - G 81 -2.2 -5.28942 | CAGGTCAAAGAAAAA GTGCTCGGAGTCACGC ATTACCG GCGTCGCGCCGGACAC CACGGATTTCGGTTC mrp 781698 - 782807 + | putative ATPase TERM 1017 782878 - 782833 - f 83 -10.7 -3.82946 | opp_overlap 782814 782836 782838, overlap 782835 782838 782840 GTATTCCAAAGAGAA TATGACATTCACTGCATTAAT ATAT ATTGATGCAGTGAATGTATTA ATAAAATAATAGCCC TERM 1018 782875 - 782835 - f 79 -10.8 -3.49634 | gap 1, opp_overlap 782814 782836 782838, overlap 782833 782838 782840 ATTCCAAAGAGAATA TGACATTCACTGCATTAAT ATAT ATTGATGCAGTGAATGT-A TTAATAAAATAATAG TERM 1019 782836 - 782875 + F 90 -14.6 -3.17212 | opp_overlap 782835 782833 782838 782840, overlap 782814 782838 TTCCAAAGAGAATAT GACATTCACTGCATTAAT ATAT ATTGATGCAGTGAATGTA TTAATAAAATAATAG TERM 1020 782873 - 782838 - f 93 -15 -2.88134 | opp_overlap 782814 782838 782836, overlap 782835 782833 782840 CCAAAGAGAATATGA CATTCACTGCATTAAT ATAT ATTGATGCAGTGAATG TATTAATAAAATAAT TERM 1021 782838 - 782873 + F 100 -17.2 -3.1478 | opp_overlap 782835 782833 782838 782840, overlap 782814 782836 CCAAAGAGAATATGA CATTCACTGCATTAAT ATAT ATTGATGCAGTGAATG TATTAATAAAATAAT TERM 1022 782871 - 782840 - f 78 -11.8 -2.97857 | opp_overlap 782838 782836, overlap 782838 782835 782833 AAAGAGAATATGACA TTCACTGCATTAAT ATAT ATTGATGCAGTGAA TGTATTAATAAAATA yehE 783085 - 783366 + | hypothetical protein TERM 1023 783385 - 783414 + F 100 -18.1 -5.69793 | opp_overlap 783377 TTATTAATTCCGCAA GCCCATATCATTG ATAT CAATGATATGGGC TTTTTTATTTGCTGT stcA 783645 - 784178 + | putative fimbrial subunit protein TERM 1024 784172 - 784184 + F 72 -2.7 -5.02074 | overlap 784173 GATGACGGTATTAAC TGATT AAC AATCG TTTTTTGGCGGCTAA TERM 1025 784192 - 784211 + F 93 -12.2 -3.77193 | AACAATCGTTTTTTG GCGGCTAA GCTT TTAGCCGC TTGTATCTCTTTTAT TERM 1026 784272 - 784297 + G 74 -7.5 -4.13246 | ATTATGCCTGGCTTG TGCCGCTATGC CTGC GTGGAGCGGCA TTTATATATACGGTA stcB 784240 - 784920 + | putative fimbrial chaperone protein stcC 784949 - 787435 + | putative outer membrane usher protein stcD 787451 - 788473 + | hypothetical protein TERM 1027 788479 - 788516 + T 77 -10.7 -3.37796 | opp_overlap 788479 788476 788475, overlap 788478 788484 788486 TTATAATTAAATTTA TGCGGTACGCACTCTTT ATAG AAAGAGTGCGTATATCA TTATCGATGATAAAA TERM 1028 788484 - 788511 + T 93 -15.8 -2.97245 | opp_overlap 788479 788476 788475, overlap 788478 788479 788486 ATTAAATTTATGCGG TACGCACTCTTT ATAG AAAGAGTGCGTA TATCATTATCGATGA TERM 1029 788486 - 788509 + T 85 -14 -3.03741 | opp_overlap 788479 788476 788475, overlap 788478 788484 788479 TAAATTTATGCGGTA CGCACTCTTT ATAG AAAGAGTGCG TATATCATTATCGAT yohN 788831 - 788517 - | hypothetical protein TERM 1030 789496 - 789464 - g 75 -11.1 -3.36452 | opp_overlap 789493 ATGTCGGAACATTAA CCGCCTCACGCGCTG ACG CGATGCGTGCGGCGG TAGAAAGCGCTTATG thiM 789241 - 790038 + | hydroxyethylthiazole kinase TERM 1031 790370 - 790359 - g 74 -7.2 -4.08216 | opp_overlap 790359, overlap 790360 TGATGCTGGCGAAAA GCGG CGAT CCGC TGCTCTCGCCCTCTG TERM 1032 790664 - 790645 - g 74 -2.8 -4.87626 | gap 1, overlap 790648 TGTGAACACCAAAAA TAC-GCACG GGA CGGGCTGTA CGCTGTCGGCGGCGC thiD 790025 - 790825 + | phosphomethylpyrimidine kinase yegW 790861 - 791607 + | GntR family transcriptional regulator yegV 792546 - 791581 - | putative sugar kinase yegU 793547 - 792543 - | putative hydrolase yegT 794815 - 793544 - | putative nucleoside permease TERM 1033 793965 - 793955 - G 81 -2.4 -5.4251 | overlap 793956 GCCATAGACAAAAAA GCCG TAG CGGA TCGCAGCGGTAACAA TERM 1034 794195 - 794179 - G 77 -3.7 -4.99312 | AACAGAAGAAGAAAA CGAGAAA GTT TTTATCG CGCAGCAGGATCAGC TERM 1035 794649 - 794628 - G 90 -5.1 -5.24129 | overlap 794629 794642 TGCGCCGAGAAAAAA CGGTCGG TAACGGAG CCGACCA GAATCGGCGACAGGA TERM 1036 794709 - 794721 + g 83 -6.2 -4.87803 | CAGCCTATTTCACCG GCGG AAAAC CCGC TTTTATTTAGCCATA fbaB 795069 - 796121 + | fructose-bisphosphate aldolase TERM 1037 796158 - 796137 - T 100 -11.6 -4.78572 | opp_overlap 796151 796154, overlap 796153 GTTCAACGAAGAAAA GCCGGATG TGAACG CATCCGGC CAGCGGCAGGTGTTA yegS 797073 - 796174 - | lipid kinase SPA0713 797638 - 797973 + | hypothetical protein SPA0714 798095 - 798511 + | hypothetical protein SPA0715 798661 - 798470 - | hypothetical protein TERM 1038 799016 - 798985 - R 100 -9.5 -5.13473 | overlap 798988 ATTATACGCAAAAAA TAAGCCTGCGTAA GGGAGA TTACGCAGGCCAA GGAGGTTATGGGTTA TERM 1039 799013 - 798988 - R 100 -13.4 -4.65666 | overlap 798985 ATACGCAAAAAATAA GCCTGCGTAA GGGAGA TTACGCAGGC CAAGGAGGTTATGGG yegQ 800489 - 799128 - | putative protease TERM 1040 799848 - 799865 + g 71 -6.3 -4.34008 | overlap 799834 TTCGTGCTTATGCAC GATGTTG CCGA CAACGTC TTCTTTTCCTTCCTG SPA0717 800653 - 801270 + | hypothetical protein TERM 1041 801416 - 801405 - f 80 -5.8 -5.0917 | TCACTAAAAAATAAA GGTG AAAT CACC TCGGCAACATGCATT SPA0718 801588 - 801686 + | hypothetical protein SPA0719 801926 - 802345 + | hypothetical protein TERM 1042 802404 - 802418 + F 79 -2.9 -5.28561 | GAAATATTAATTGGA TATGT CGTGA ACATA TTTTTGTTATATGTT SPA0720 802782 - 803144 + | hypothetical protein SPA0721 803154 - 803456 + | hypothetical protein SPA0722 803586 - 804086 + | hypothetical protein SPA0723 804157 - 804696 + | hypothetical protein SPA0724 804914 - 805192 + | hypothetical protein SPA0725 805261 - 805863 + | hypothetical protein TERM 1043 806339 - 806313 - g 85 -8.9 -4.44046 | opp_overlap 806318 806319, overlap 806318 CTGACTTTAAAGAAA TAAAACCATCG TGTGG CGATGATTTTA TAAATCTAAATCTGA TERM 1044 806334 - 806318 - g 85 -4.4 -5.18866 | opp_overlap 806318 806319, overlap 806313 TTTAAAGAAATAAAA CCATCG TGTGG CGATGA TTTTATAAATCTAAA SPA0726 805973 - 806452 + | hypothetical protein TERM 1045 806690 - 806701 + G 84 -3 -5.40072 | opp_overlap 806693 806699 CACAGATGTGGCAAC GAAT AAAA ATTC TTTTTTTACAAAGAA TERM 1046 806716 - 806699 - g 79 -2.8 -5.1963 | opp_overlap 806690, overlap 806693 GGCAACGAATAAAAA TTCTTT TTTTAC AAAGAA TGATGATGGAGAATG SPA0727 806520 - 806984 + | hypothetical protein TERM 1047 807351 - 807339 - g 71 -4.8 -4.64861 | opp_overlap 807342, overlap 807341 GCTTGTCAAAAGAAA GCCA GCCCT TGGC GATTATGTTGTTGAT TERM 1048 807454 - 807484 + G 77 -8.4 -4.15006 | opp_overlap 807462, overlap 807460 807462 GATAGTAAAGATCTA TGTAAGAAGCTGCA CGA TGCAGCTGTTTATA TTTTACCGTACATGT TERM 1049 807460 - 807478 + G 79 -7.4 -4.45771 | opp_overlap 807462, overlap 807454 807462 AAAGATCTATGTAAG AAGCTGCA CGA TGCAGCTG TTTATATTTTACCGT TERM 1050 807476 - 807462 - g 74 -10 -3.68836 | opp_overlap 807460 807454 807462 AGATCTATGTAAGAA GCTGCA CGA TGCAGC TGTTTATATTTTACC TERM 1051 807462 - 807476 + G 76 -10 -3.82656 | opp_overlap 807462, overlap 807460 807454 AGATCTATGTAAGAA GCTGCA CGA TGCAGC TGTTTATATTTTACC SPA0728 807085 - 807528 + | hypothetical protein SPA0729 807631 - 808368 + | hypothetical protein SPA0730 809182 - 808499 - | hypothetical protein SPA0731 811333 - 809222 - | hypothetical protein TERM 1052 811020 - 811046 + g 74 -4.4 -4.7254 | gap 1 GCAAGCCAGGCGTGA GTGG-AGCGGG GACGAG CGCGCTGCCAC TTTTTGATCAGCGCT TERM 1053 811261 - 811277 + g 72 -2.1 -4.98255 | overlap 811255 811262 TATGCCATTCGCGTT GCCCGTC ATT GAGGGGA TTTTTGTGGTTGCAC SPA0732 812039 - 811344 - | hypothetical protein TERM 1054 811739 - 811773 + g 77 -8.4 -4.18018 | opp_overlap 811738 AGCGGCGTAAGATAT CCTCAACCTTGTGGCG TAA CGCCGCGCCGTCGAGG TTTTCGCTCAAGCCC TERM 1055 811978 - 811998 + g 100 -4.6 -6.2845 | overlap 811982 TTCTCCTCGGCGATA CGGGCCGC AATCA GCGGTTTG TTTTTTTTTGTAGTT TERM 1056 811982 - 811994 + g 100 -6.2 -5.48106 | overlap 811978 CCTCGGCGATACGGG CCGC AATCA GCGG TTTGTTTTTTTTTGT SPA0733 812945 - 812061 - | hypothetical protein TERM 1057 812830 - 812842 + g 79 -3.3 -5.1861 | overlap 812831 TACCAACCTTGTTCA CGCAG GCG CTGCA TTTTTTGATGCTCCG TERM 1058 813146 - 813133 - R 78 -5.3 -4.98857 | opp_overlap 813140 ATCCAACGATAAAAA TGGTT GCTT AACCA GCGCTGGATAATTTC baeR 814254 - 813532 - | DNA-binding transcriptional regulator BaeR baeS 815654 - 814251 - | signal transduction histidine-protein kinase BaeS yegB 817066 - 815654 - | multidrug efflux system protein MdtE TERM 1059 815742 - 815722 - G 73 -5.5 -4.57569 | GCACGCGGGCAAAAA TTATCGC CGGTAGC GCGATAA TAACCGCCATACATA TERM 1060 816242 - 816224 - G 86 -12.4 -3.86015 | overlap 816211 GACCGGCGTCATAAA CGGCAGCA TAC CGCTGCCG ATACGCCCGGCAAAA yegO 820143 - 817063 - | multidrug efflux system subunit MdtC TERM 1061 817368 - 817384 + g 76 -3 -5.07486 | gap 1, opp_overlap 817368 817371, overlap 817371 817380 CTTCAAGCGCAAAAT CGACCAT CATA ATGG-CG TTTTTCTTCACAATG yegN 823266 - 820144 - | multidrug efflux system subunit MdtB TERM 1062 820691 - 820662 - G 76 -9.9 -3.78934 | overlap 820663 CGGCGGCGACAATAA GCCAGACGGTGCT GCCC AGCGCCGCCTGGA AGGCGAGCGTACTGC TERM 1063 820690 - 820663 - G 81 -13.4 -2.87146 | overlap 820662 GGCGGCGACAATAAG CCAGACGGTGCT GCCC AGCGCCGCCTGG AAGGCGAGCGTACTG TERM 1064 820729 - 820745 + g 91 -7.9 -5.1287 | CTGCGTTGTAATATC CGCTGGC AGG GCGAGCG TTTTTTCCGTATCGA TERM 1065 821970 - 821982 + g 84 -6.2 -5.1286 | opp_overlap 821945 CCGCGCCTTTGAGCG CCGC CGCCA GCGG TTTTTCTCCTTTTTC TERM 1066 822154 - 822106 - G 72 -2.2 -4.92239 | overlap 822109 822111 822121 822132 GGAAAAATCCAAAAA CACCATCACCGCAAAGGTGCCG ATAAG CGACAGCGGTACGGCGACGCCG GGAATAATTGTGGCG TERM 1067 824746 - 824727 - R 86 -11.4 -3.71649 | overlap 824720 CGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CAAAATAAGGAAAGG yegD 826275 - 824923 - | putative chaperone alkA 826409 - 827278 + | 3-methyl-adenine DNA glycosylase II yegE 830236 - 827246 - | hypothetical protein TERM 1068 829552 - 829532 - G 95 -5.4 -5.31158 | gap 1 TAAAAAAATTAAAAA CGCCT-CCA TTCG CGGCAGGCG CACCGCACTCCACAT udk 830567 - 831208 + | uridine kinase dcd 831299 - 831880 + | deoxycytidine triphosphate deaminase TERM 1069 833289 - 833272 - g 73 -5.5 -4.55128 | AGCTGGAAAGGAAAA GCGCATG TTGA CATGAGC AATACGCGCCTCGAA asmA 831919 - 833775 + | putative assembly protein yegH 835429 - 833870 - | hypothetical protein TERM 1070 836985 - 836995 + G 74 -2.4 -4.99861 | TCTGACCACCTCCAA CGCC AGC GGCA TTTTTGTGATTCGTC wza 836104 - 837243 + | putative polysaccharide export protein wzb 837249 - 837698 + | tyrosine phosphatase wzc 837695 - 839854 + | tyrosine kinase TERM 1071 839881 - 839862 - f 76 -4.8 -4.88687 | overlap 839864 CCAAATAAAAAATAA GGCGTGCC GGAT GGCGCGGC CTGTGACTGTAGGCC wcaA 839941 - 840783 + | glycosyl transferase TERM 1072 841036 - 841051 + G 80 -9 -4.19238 | opp_overlap 841035 841034 TGATCAACAAACATG TCGTCG CCGG CGACGA TTTTACCATTCGCCA wcaB 840786 - 841274 + | putative colanic acid biosynthesis acetyltransferase WcaB TERM 1073 841658 - 841643 - gf 76 -5.4 -4.70879 | gap 1 GTCAAAGCGCAAAAA CCAGACG TCA CG-CTGG TCTGGACGCTGCACG TERM 1074 841838 - 841849 + GF 73 -5.8 -4.41348 | overlap 841833 CGGGACATGCTGCGG CTGG GCTG CCAG TTTATTTCGCCGAGC TERM 1075 842393 - 842410 + GF 71 -7.7 -3.84825 | gap 1 GCTCAGGCGGTATTT GGCG-CCA CGC TGGACGCC TTTCGTATGCGTAGC wcaC 841271 - 842488 + | glycosyl transferase TERM 1076 842966 - 842979 + G 71 -4.5 -4.64861 | AAAATTTGGCGGTAA GCGTA CCAC TGCGC TTTATTTTGAACCGG wcaD 842463 - 843677 + | putative colanic acid biosynthesis protein wcaE 843690 - 844436 + | glycosyl transferase wcaF 844452 - 845006 + | putative colanic acid biosynthesis acetyltransferase WcaF TERM 1077 846071 - 846039 - g 70 -9.1 -3.71649 | overlap 846033 846040 846042 GCTGGAAACCGGAAA TCACCCTGTCGGAGA TGG TCTCCGAGATGGTGG CGAACGATCTGGAAG TERM 1078 846070 - 846040 - g 76 -12.6 -2.82668 | overlap 846033 846039 846042 CTGGAAACCGGAAAT CACCCTGTCGGAGA TGG TCTCCGAGATGGTG GCGAACGATCTGGAA gmd 845030 - 846151 + | GDP-mannose 4,6-dehydratase TERM 1079 846455 - 846422 - g 74 -11.1 -3.24235 | overlap 846420 TGATAGAGAGCAACA TTATTCACGCCGCGC ACCT GCACAACGTGAACAA ACTGCTGTTTCTCGG TERM 1080 846698 - 846713 + G 72 -11.8 -2.84051 | overlap 846697 ATTCACATGTGATCC CGGCGC TGCT GCGCCG CTTTCATGAGGCTGC fcl 846154 - 847119 + | GDP-fucose synthetase TERM 1081 847334 - 847361 + G 83 -8.5 -4.41548 | gap 2 GCAGGCGGAACTGGG CGTGCGCCTGCCG CTGG CGGCAGG-G-ACG TTTTATGGCGTCTGG wcaH 847122 - 847595 + | putative O-antigen biosynthesis protein wcaI 847592 - 848815 + | glycosyl transferase manC 848812 - 850254 + | mannose-1-phosphate guanylyltransferase manB 850365 - 851735 + | phosphomannomutase wzxC 853285 - 854763 + | colanic acid exporter wcaL 856062 - 857201 + | putative glycosyl transferase in colanic acid gene cluster wcaM 857212 - 858615 + | putative colanic acid biosynthesis protein TERM 1082 859729 - 859780 + F 100 -10.1 -4.75518 | opp_overlap 859729 TGATAAACATAATAA CGGCAGTGAACATTCGAAGCGGC AAGTTG GCTGAAACGAGTGTTGACTGCCG TTTTAGTTTTGTATA TERM 1083 859908 - 859927 + F 71 -7.8 -3.86897 | TTAAGTTTTAGTGAG CTTTGCCC TGCT GGGCGAGG TTTGTAACAAGTCGA TERM 1084 860743 - 860719 - g 71 -8.6 -3.91911 | overlap 860720 CGCACTGGAAGGAAA GCCTTTGCCA ATTTA TGGCAAAGGG GATCAGATTCGCGAT TERM 1085 860742 - 860720 - g 75 -12.1 -2.94825 | overlap 860719 GCACTGGAAGGAAAG CCTTTGCCA ATTTA TGGCAAAGG GGATCAGATTCGCGA rfbB 860063 - 861148 + | dTDP-glucose 4,6 dehydratase rfbD 861148 - 862047 + | dTDP-4-dehydrorhamnose reductase TERM 1086 862071 - 862058 - f 74 -8.1 -3.89215 | opp_overlap 862058 TCTGATAAATTTAAA TGCCC ATAA GGGCA TTTTCTATGAATGAG TERM 1087 862058 - 862071 + F 81 -8.1 -4.55287 | opp_overlap 862058 TCTGATAAATTTAAA TGCCC ATAA GGGCA TTTTCTATGAATGAG rfbA 862095 - 862973 + | TDP-glucose pyrophosphorylase rfbC 862983 - 863525 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1088 864027 - 864038 + G 71 -4.4 -4.59853 | TTCCCAATGGTCAGA TGAG CTCG CTCA TTTTTGGGGAGTTAC TERM 1089 864345 - 864369 + G 78 -6.5 -4.53034 | overlap 864348 GGGGAAGAAAGGGAT TTGTCCATCAT GCT GTGATGGATGA TTTTGATTCTCTAGA rfbI 863531 - 864505 + | CDP-6-deoxy-delta-3,4-glucoseen reductase rfbF 864521 - 865294 + | glucose-1-phosphate cytidylyltransferase rfbG 865299 - 866378 + | CDP-glucose 4,6-dehydratase TERM 1090 866898 - 866885 - g 78 -6.7 -4.62475 | ACTGAGAAATCAAAA GCGAT AATG ATCGC TCATACACTCGGTAA rfbH 866405 - 867718 + | putative dehydratase RfbH TERM 1091 868130 - 868117 - g 84 -3.1 -5.35815 | TATACTAAACAAAAA GCAAA TGAG TTCGC CGCCGCCATTATAGA rfbS 867754 - 868593 + | paratose synthase rfbE 868574 - 869605 + | CDP-tyvelose-2-epimerase TERM 1092 869635 - 869606 - f 71 -10.7 -2.63102 | opp_overlap 869634 ACTAGTTCTATATGA TGTTTCTGCCCGC GAAA GCGGGCAGAATTA AAGAATGAAATATTT TERM 1093 870292 - 870316 + G 70 -9.5 -3.38812 | opp_overlap 870294 870296, overlap 870290 CAATACTGCCCATTA TATATATATCG TTT CGGTATATATA TGTTCTTAAAGCGAA TERM 1094 870372 - 870384 + G 81 -4.1 -5.22794 | TTACTATCACGTTCA TCAGG GTT TCTGA TTTTTTCGTCCTTAT rfbX 869676 - 870974 + | putative O-antigen transporter rfbV 870976 - 871977 + | putative glycosyl transferase TERM 1095 872231 - 872244 + F 73 -2.3 -5.26247 | TGGCAATTAGAGCTT GTCGG AAAC CCTAC TTTTCTTTCTTTTGC rfbU 872552 - 873859 + | putative glycosyltransferase rfbV 873861 - 874862 + | putative glycosyl transferase TERM 1096 875116 - 875129 + F 73 -2.3 -5.26247 | TGGCAATTAGAGCTT GTCGG AAAC CCTAC TTTTCTTTCTTTTGC rfbU 875437 - 876744 + | putative glycosyltransferase rfbV 876746 - 877747 + | putative glycosyl transferase TERM 1097 878001 - 878014 + F 73 -2.3 -5.26247 | TGGCAATTAGAGCTT GTCGG AAAC CCTAC TTTTCTTTCTTTTGC rfbU 878322 - 879383 + | putative glycosyltransferase rfbN 879384 - 880328 + | putative rhamnosyltransferase rfbM 880329 - 881768 + | mannose-1-phosphate guanylyltransferase rfbK 881755 - 883188 + | phosphomannomutase TERM 1098 884408 - 884418 + G 76 -5.4 -4.82667 | AACTAGCCTTGATGA GTTG CCA CAAC TTTTTAATGTACTAA rfbP 883260 - 884690 + | undecaprenyl-phosphate galactosephosphotransferase gnd 884854 - 886260 + | 6-phosphogluconate dehydrogenase TERM 1099 886280 - 886298 + F 100 -11.7 -6.06529 | TGCAAGCTTGTTTAA GCCCGGT TTAAT ACCGGGC TTTTTTTTATCTCTA ugd 886497 - 887663 + | UDP-glucose 6-dehydrogenase TERM 1100 888405 - 888385 - g 74 -4.7 -4.77036 | GCGCAGGAGCAAAAA GATCTGCGT ATT AAGCAAATC GAAGAAGCGTTGCGC cld 887812 - 888789 + | polysaccharide chain length regulator TERM 1101 888834 - 888868 + T 87 -14.4 -2.83073 | opp_overlap 888844, overlap 888844 AAAGGTAAAATTTCT CATTAAAAAACCGGGC ATT GCCCGGTTTTTTTACG CTTATTGATGACGCT TERM 1102 888858 - 888844 - T 100 -12.8 -5.14563 | opp_overlap 888834 888844 TTTCTCATTAAAAAA CCGGGC ATT GCCCGG TTTTTTTACGCTTAT TERM 1103 888844 - 888858 + T 100 -12.8 -5.48303 | opp_overlap 888844, overlap 888834 TTTCTCATTAAAAAA CCGGGC ATT GCCCGG TTTTTTTACGCTTAT hisI 889481 - 888870 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 1104 889414 - 889438 + g 84 -6.3 -5.03314 | overlap 889415 GATACCGCATGTTGC ACGATGGCTGG CAT CAGGCCATCGG TTTTTTCCCAGTCCA TERM 1105 889415 - 889437 + g 71 -9.8 -3.61506 | overlap 889414 ATACCGCATGTTGCA CGATGGCTGG CAT CAGGCCATCG GTTTTTTCCCAGTCC hisF 890251 - 889475 - | imidazole glycerol phosphate synthase subunit HisF hisA 890970 - 890233 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 1106 890509 - 890527 + g 84 -8.8 -4.25104 | GGTCTCCACCAGTTG TTCCAGCG AGA CGCCGGAA TTTTCCTGCCAGCCG hisH 891560 - 890970 - | imidazole glycerol phosphate synthase subunit HisH hisB 892627 - 891560 - | imidazole glycerol-phosphate dehydratase/histidinol phosphatase TERM 1107 891835 - 891811 - G 76 -10.7 -3.62096 | opp_overlap 891811, overlap 891813 GCGGACGACCGGAAA TATCCAGCGCG CAG CGCGCCAGACA TTCATCCATCGGCAG TERM 1108 891833 - 891813 - G 75 -11.1 -3.39018 | opp_overlap 891811, overlap 891811 GGACGACCGGAAATA TCCAGCGCG CAG CGCGCCAGA CATTCATCCATCGGC hisC 893703 - 892624 - | histidinol-phosphate aminotransferase hisD 895004 - 893700 - | histidinol dehydrogenase TERM 1109 894794 - 894823 + g 93 -11.5 -4.44974 | gap 1 CGGCGGCGATCTCTT CAGGGGTGAC-GCG TAG CGCTGTCACTTCTG TTTTATCAAATTTAG TERM 1110 894848 - 894871 + g 70 -3 -4.78149 | gap 1, opp_overlap 894838, overlap 894850 ATTTAGCGCTGTATT CACGCAG-GAC ATC GTCACCGCGCG TTTTTACATTATACA hisG 896006 - 895107 - | ATP phosphoribosyltransferase TERM 1111 895150 - 895160 + g 71 -8.2 -3.89617 | opp_overlap 895146 ACCAGAATCGAGCTG GCGC CAA GCGC TTTCAGTTTCTCCAT TERM 1112 896061 - 896087 + H 100 -22.4 -3.99405 | opp_overlap 896061 GCGCGCCAAAAAAAA GCCCCCGGAAGA TGA TCTTCCGGGGGC TTTCTCATGCGTTCA TERM 1113 896087 - 896061 - H 100 -22.4 -5.75342 | opp_overlap 896061 GCGCGCCAAAAAAAA GCCCCCGGAAGA TGA TCTTCCGGGGGC TTTCTCATGCGTTCA TERM 1114 896476 - 896459 - g 81 -8.4 -4.26076 | TTACCGGCAGCAAAA CCACCC TTGATG GGGTGG AAGCGGCCCGTATGA yeeZ 896365 - 897189 + | hypothetical protein TERM 1115 897294 - 897283 - g 77 -4.4 -4.83615 | overlap 897287 GATGCGTTAGAAAAA GAAG GCAG CTTC GCGGCGGCGTCGGCA yeeY 897235 - 898149 + | putative transcriptional regulator TERM 1116 898251 - 898278 + F 100 -9.2 -5.63103 | opp_overlap 898254 TGCAAAAAATGACAC TAACCGACGTTT TAAT ACGCGTCGGTTA TTTTTTTGCTTCAAA yeeF 898429 - 899793 + | putative amino acid transporter protein TERM 1117 899839 - 899821 - T 100 -16 -4.4261 | opp_overlap 899821 TCGGCAATAGTAAAA CCGGAGGC AGT GCCTCCGG TTTTTTGTCTGCCAT TERM 1118 899821 - 899839 + T 100 -16 -5.37043 | opp_overlap 899821 TCGGCAATAGTAAAA CCGGAGGC AGT GCCTCCGG TTTTTTGTCTGCCAT TERM 1119 899923 - 899905 - T 71 -9.6 -3.14132 | opp_overlap 899904 899908, overlap 899908 TCCGCTCTGGATTAA CAATGCCC GTC AGGCATTG GTCAATTACACAATC sbcB 901359 - 899929 - | exonuclease I TERM 1120 901680 - 901699 + H 88 -12.2 -3.56704 | opp_overlap 901680, overlap 901676 GGGTCTATGTACAGA GGGACACA ACGC TGTGTCCC TTAATTTCATGCGGG TERM 1121 901699 - 901680 - H 79 -12.2 -2.91264 | opp_overlap 901680 901676 GGGTCTATGTACAGA GGGACACA ACGC TGTGTCCC TTAATTTCATGCGGG TERM 1122 903848 - 903865 + H 82 -7.1 -4.75934 | overlap 903858 TGTTTAAGGTATTTT TTCTTTC GGCT GAAAGAA TTCTTTTATTTTTTG TERM 1123 903858 - 903873 + H 79 -2.6 -5.31275 | overlap 903848 ATTTTTTCTTTCGGC TGAAAG AATT CTTTTA TTTTTTGTGGTAGCG TERM 1124 904745 - 904755 + H 76 -8.2 -4.07568 | GGCTGCTCTGCCTGC GCGC TGG GCGC TTTTCCGCCCGGGGC TERM 1125 905923 - 905907 - H 70 -10.8 -2.55297 | overlap 905906 905904 GCAGTTTAAATATAT CGCCGC TGGCG GCGGCG TGGTGCAAAGCATTA phsB 906978 - 907556 + | thiosulfate reductase electron transport protein PhsB phsC 907553 - 908317 + | thiosulfate reductase cytochrome b subunit TERM 1126 908379 - 908332 - f 75 -6.7 -4.45485 | gap 2, opp_overlap 908338 908339 908349, overlap 908336 908337 908340 908344 AGCATATCCATAAAA TAAAGTCAGCAAGAAAATGTGCC TTGT GTCACATTTTCTTGC-AA-TTTA TCCATGTTTGTTTAA TERM 1127 908376 - 908336 - f 78 -5.6 -4.7878 | gap 1, opp_overlap 908338 908339 908349, overlap 908332 908337 908340 908344 TATCCATAAAATAAA GTCAGCAAGAAAATGTGCC TTGT GTCACATTTTCTTGC-AAT TTATCCATGTTTGTT TERM 1128 908375 - 908337 - f 70 -9.1 -3.46183 | gap 1, opp_overlap 908338 908339 908349, overlap 908336 908332 908340 908344 ATCCATAAAATAAAG TCAGCAAGAAAATGTGCC TTGT GTCACATTTTCTTGC-AA TTTATCCATGTTTGT TERM 1129 908338 - 908375 + F 74 -8.5 -4.0056 | opp_overlap 908337 908336 908332 908340 908344, overlap 908339 908349 TCCATAAAATAAAGT CAGCAAGAAAATGTGCC TTGT GTCACATTTTCTTGCAA TTTATCCATGTTTGT TERM 1130 908339 - 908374 + F 78 -12 -2.99251 | opp_overlap 908337 908336 908332 908340 908344, overlap 908338 908349 CCATAAAATAAAGTC AGCAAGAAAATGTGCC TTGT GTCACATTTTCTTGCA ATTTATCCATGTTTG TERM 1131 908373 - 908340 - f 93 -15.5 -2.86242 | opp_overlap 908339 908338 908349, overlap 908337 908336 908332 908344 CATAAAATAAAGTCA GCAAGAAAATGTGCC TTGT GTCACATTTTCTTGC AATTTATCCATGTTT TERM 1132 908504 - 908523 + F 87 -10 -4.25104 | CACCTTTCTCCTGCG CTTGCGGC CGAT GCCGTAAG TTTTGCTCCCCAACC TERM 1133 909421 - 909409 - f 72 -9.1 -3.53091 | ATGGCGCTGCCTAAA GCGGA AAT TCCGC ATATCAAAGCAAAAT TERM 1134 910087 - 910098 + G 84 -5.8 -5.06451 | CGTGACTTTGCGAAG CCGT GGGA ACGG TTTTTTGACGTCCTG sbmC 909763 - 910230 + | DNA gyrase inhibitor TERM 1135 910282 - 910254 - f 76 -8.2 -4.07568 | gap 1, overlap 910256 TTTCCTGGCTGAAAA GAGCGGACGGA TAATGTGT TCCGTCCGC-C AGTGCGCTATTTTTG TERM 1136 910281 - 910256 - f 86 -11.9 -3.63744 | overlap 910254 TCCTGGCTGAAAAGA GCGGACGGA TAATGTGT TCCGTCCGC CAGTGCGCTATTTTT TERM 1137 910719 - 910697 - g 76 -2.8 -5.08824 | gap 1, overlap 910698 GCCTTAGGGAAAAAA CCGTATCAG GCGCTA CTGATA-GG CATAACGCTCGCCGT yeeA 910349 - 911407 + | hypothetical protein yeeX 911652 - 911987 + | hypothetical protein TERM 1138 911995 - 912029 + T 79 -10.7 -3.53091 | CCGAATAATGCGCTA CGGCAGTGGGAGCGT ATATC AGGCTCTCACTGCAG TTTGACCCCGCCAGT pduX 912923 - 912021 - | hypothetical protein pduW 914195 - 912981 - | propionate kinase TERM 1139 913599 - 913617 + g 70 -6.6 -4.07568 | AATCACCCGTAATGC GCTGAGTG GTA CGCCCAGC TTTTCAGCCAGAACG TERM 1140 913921 - 913908 - G 74 -2.3 -5.02074 | overlap 913909 CGAGTCTTTAAAAAA CTCAC CGCC GTGCG CCACACGATGACCCA pduV 914632 - 914180 - | putative propanediol utilization protein PduV SPA0816 914987 - 914637 - | putative propanediol utilization protein PduU pduT 915541 - 914987 - | putative propanediol utilization protein PduT pduS 916872 - 915544 - | putative ferredoxin TERM 1141 916838 - 916802 - G 83 -9.9 -4.11394 | overlap 916803 916824 ACGTGAGCGGGAAAA CCCGCGCCGCCCGCGCC GAC AACGCCCGCTGCGCGGA CGCGCTCGCGAATTT TERM 1142 916837 - 916803 - G 72 -11.2 -3.06515 | overlap 916802 916824 CGTGAGCGGGAAAAC CCGCGCCGCCCGCGCC GAC AACGCCCGCTGCGCGG ACGCGCTCGCGAATT TERM 1143 916840 - 916824 - G 74 -11.5 -3.28712 | overlap 916803 916802 CGCCCGCGCCGACAA CGCCCGC TGC GCGGACG CGCTCGCGAATTTCA pduQ 918008 - 916896 - | putative propanol dehydrogenase pduP 919408 - 918020 - | putative CoA-dependent proprionaldehyde dehydrogenase pduO 920415 - 919405 - | hypothetical protein pduN 920700 - 920425 - | propanediol utilization: polyhedral bodies pduM 921195 - 920704 - | hypothetical protein pduL 921824 - 921192 - | hypothetical protein pduK 922306 - 921824 - | putative propanediol utilization protein PduK TERM 1144 922101 - 922146 + g 90 -10.4 -4.26076 | gap 1, overlap 922102 922104 TGTTCGGCAAATTGC GCACCGGTGGTGATGGCCGCC TGCAC GGAGGCCA-CATCACCGGTAA TTTTAATCACCATCC TERM 1145 922102 - 922145 + g 84 -13.9 -3.15324 | gap 1, overlap 922101 922104 GTTCGGCAAATTGCG CACCGGTGGTGATGGCCGCC TGCAC GGAGGCCA-CATCACCGGTA ATTTTAATCACCATC TERM 1146 922104 - 922143 + g 100 -16.5 -3.13504 | gap 1, overlap 922102 922101 TCGGCAAATTGCGCA CCGGTGGTGATGGCCGCC TGCAC GGAGGCCA-CATCACCGG TAATTTTAATCACCA pduJ 922585 - 922310 - | putative propanediol utilization protein PduJ pduH 922954 - 922604 - | PduH protein pduG 924776 - 922944 - | PduG protein TERM 1147 923488 - 923444 - G 81 -12.3 -3.61398 | gap 1, opp_overlap 923444 923481 GCTCGCGGGCAATAA TCATCGTCAC-CATGTCGCC TGCACC GGCGAGATGGGTGGCGATGA TTTCGCCTTTAGGGT TERM 1148 923444 - 923488 + g 95 -14.5 -3.71917 | gap 1, opp_overlap 923444, overlap 923481 GCTCGCGGGCAATAA TCATCGTCAC-CATGTCGCC TGCACC GGCGAGATGGGTGGCGATGA TTTCGCCTTTAGGGT TERM 1149 924020 - 924031 + g 74 -7.2 -4.07568 | CGCGCGCTTTGACGT CGCC GGAT GGCG TTTTAACCACCACGG TERM 1150 924075 - 924087 + g 86 -7.7 -4.82667 | AATCAGCGCGCGCGC CATCG GGA CGATG TTTTTCGTCTCATCG pduE 925504 - 924983 - | diol dehydratase small subunit TERM 1151 925346 - 925360 + g 70 -7.1 -4.15044 | ATTGGTGGCGGTTTT CACCC ATTCC GGGTG TTTGTTCGCCAGCGG TERM 1152 925392 - 925449 + g 72 -11.2 -3.14051 | gap 3, overlap 925393 TAGTCGCTGACCTTT GCGCTGCGGGACG-TGCCGCCTGCCGCAG GAG CCGCTGCTGGC-GCATCGCCCTGCAG-GC TGTTCATGCGGCTCA TERM 1153 925534 - 925524 - R 72 -8.2 -3.73224 | opp_overlap 925523 925530 925532 TTATCCTTTATCAAA GCGC CAC GCGC AGTTCCTGCGGGTTT TERM 1154 925530 - 925546 + r 82 -7.9 -4.59773 | opp_overlap 925524, overlap 925523 925532 TTTATCAAAGCGCCA CGCGCAG TTC CTGCGGG TTTTTGCCCGTCACG pduD 926193 - 925519 - | diol dehydratase medium subunit TERM 1155 925659 - 925681 + g 74 -3.2 -4.89852 | overlap 925650 925649 CCGGCTGCGGTGATT CGCGTTTCGC ATA GCGGGCGGCG TTTTTATCAATCTGA pduC 927868 - 926204 - | glycerol dehydratase large subunit pduB 928588 - 927887 - | putative propanediol utilization protein PduB pduA 928980 - 928696 - | putative propanediol utilization protein PduA TERM 1156 930387 - 930419 + H 86 -13 -3.36046 | gap 1, opp_overlap 930387 930393 930394, overlap 930394 GCGTTCACGAACTGA TCAAAACGTCTCCCA GCAA TGGGAGAC-TTTTGA TATTGTCATTGTACT TERM 1157 930419 - 930387 - H 80 -13 -2.56596 | gap 1, opp_overlap 930387 930394, overlap 930393 930394 GCGTTCACGAACTGA TCAAAACGTCTCCCA GCAA TGGGAGAC-TTTTGA TATTGTCATTGTACT TERM 1158 930414 - 930393 - H 79 -8.7 -4.31379 | opp_overlap 930387 930394, overlap 930387 930394 ACGAACTGATCAAAA CGTCTCCCA GCAA TGGGAGACT TTTGATATTGTCATT TERM 1159 930394 - 930413 + H 100 -12.2 -4.47259 | opp_overlap 930393 930387 930394, overlap 930387 CGAACTGATCAAAAC GTCTCCCA GCAA TGGGAGAC TTTTGATATTGTCAT TERM 1160 930413 - 930394 - H 81 -12.2 -3.18105 | opp_overlap 930394 930387, overlap 930393 930387 CGAACTGATCAAAAC GTCTCCCA GCAA TGGGAGAC TTTTGATATTGTCAT TERM 1161 931125 - 931104 - g 89 -2.9 -5.48054 | opp_overlap 931102 931104 AGTAAAATGAAAAAA GCGCTTC GCTATATT GATGCGC ATTTGTCCGACGATC pocR 930480 - 931427 + | pdu/cob regulatory protein PocR TERM 1162 932133 - 932121 - f 93 -10.5 -4.56775 | opp_overlap 932123 AGGCTGCTGCAAAAA CGCGC GCT GCGCG TACAGCCGTTTAAAG TERM 1163 932574 - 932588 + F 70 -10 -3.05384 | GGGTATGTCCCTCCT TGCGAC GGC GTCGCA TTACCTGAACGCCAC TERM 1164 933110 - 933138 + F 73 -11.1 -2.55351 | opp_overlap 933115 933116, overlap 933109 933114 933115 TATCCCCGGTCACAG CAAAATGGGTAAG CGA CTTACCCGCTTTG GTTACTGTGAGGCGC TERM 1165 933115 - 933133 + F 70 -9.6 -2.98487 | opp_overlap 933115 933116, overlap 933114 933110 933109 CCGGTCACAGCAAAA TGGGTAAG CGA CTTACCCG CTTTGGTTACTGTGA TERM 1166 933133 - 933115 - f 76 -7.4 -4.34402 | opp_overlap 933115 933114 933110 933109, overlap 933116 CCGGTCACAGCAAAA TGGGTAAG CGA CTTACCCG CTTTGGTTACTGTGA TERM 1167 933132 - 933116 - f 77 -10.9 -3.2032 | opp_overlap 933115 933114 933110 933109, overlap 933115 CGGTCACAGCAAAAT GGGTAAG CGA CTTACCC GCTTTGGTTACTGTG cobD 933401 - 934360 + | cobalamin biosynthesis protein cbiC 934371 - 935003 + | precorrin-8X methylmutase TERM 1168 936027 - 936051 + G 79 -12.9 -2.87211 | opp_overlap 936045, overlap 936012 TGCGAGTCATGCAGA TGCGGCGTTTT ACC AAAACGCCGCC TGTCTGCGACGCCAT TERM 1169 936062 - 936045 - g 71 -6.2 -4.25104 | opp_overlap 936027 936012 GGCGTTTTACCAAAA CGCCGC CTGTCT GCGACG CCATCCTGTTTTCTT cbiD 935003 - 936142 + | cobalt-precorrin-6A synthase TERM 1170 936354 - 936366 + G 75 -6.9 -4.40358 | CGTGGTGCTGGCCTC CGGCG ATC CGCTG TTTTATGGCATCGGT cbiE 936136 - 936741 + | cobalt-precorrin-6Y C(5)-methyltransferase cbiT 936731 - 937309 + | cobalt-precorrin-6Y C(15)-methyltransferase cbiF 937293 - 938066 + | precorrin-4 C11-methyltransferase TERM 1171 938895 - 938869 - g 76 -2.9 -5.03314 | GTCACGCTCAAAAAA GGGGAGCCG GGGCTTATT CAGCTCGCC TCCTGCTGCCGCGTG cbiG 938047 - 939102 + | cobalamin biosynthesis protein CbiG TERM 1172 939596 - 939581 - g 78 -11.8 -3.28924 | opp_overlap 939591 TATCTGTTTTTACAA CCCGCG CAGC CGCGGG CGCGAAGGGCATCTG cbiH 939102 - 939827 + | precorrin-3B C17-methyltransferase cbiJ 939824 - 940615 + | cobalt-precorrin-6x reductase TERM 1173 941350 - 941337 - g 86 -9.5 -4.36914 | opp_overlap 941335 941348 CGGGCTGGGAGAAAA CCCGG CTAT CCGGG CGATGTTTGTCGCGC cbiK 940618 - 941409 + | synthesis of vitamin B12 adenosyl cobalamide precursor TERM 1174 941464 - 941478 + G 79 -11.4 -3.68569 | opp_overlap 941462 CCGACCTGATAACCG TCCGCG CAG CGCGGA TTCTTGGCTCGCTGG TERM 1175 941718 - 941730 + G 91 -4.1 -5.52384 | GGCGATGCGATGCTA TTCAG TAC CTGGA TTTTTTTACTCCAGA TERM 1176 941842 - 941821 - g 77 -8 -4.07568 | opp_overlap 941823 CCGCCCGCGCGAAAA TGCCGCTC GCCATA GAACGGCA ATCGCTGGCGGTTAT cbiL 941406 - 942119 + | cobalt-precorrin-2 C(20)-methyltransferase TERM 1177 942340 - 942355 + G 74 -2.4 -4.98911 | overlap 942341 TCAGAAGGTACTGCT GGCGCT GTGC GGCGCG TTTATTTTTGTCCTG TERM 1178 942613 - 942626 + G 75 -3.7 -4.96848 | overlap 942610 CCGTGCCGGACTGCG CCGCG ATGT CGCCG TTTTTCTGTGCGCGA cbiM 942206 - 942853 + | cobalt transport protein CbiM cbiN 942855 - 943136 + | cobalt transport protein CbiN TERM 1179 943168 - 943185 + G 76 -5.5 -4.81551 | opp_overlap 943154 943155, overlap 943169 AGCCGCTGGGCACAC GTTGCGC CGCA GCGCAAG TTTTTGCTGTGGCTG TERM 1180 943646 - 943658 + G 71 -4.8 -4.56133 | overlap 943648 TGGCAATCCGTCGTG CGCA AACGC TGCG TTTTGGTTATTGCAG cbiQ 943123 - 943800 + | putative cobalt transport protein CbiQ cbiO 943809 - 944624 + | cobalt transporter ATP-binding subunit TERM 1181 945105 - 945143 + G 76 -9.7 -3.86346 | gap 2, overlap 945126 AGTGTCCGGTTATTC TGGTGGCGGATATCGACCG GGG CGG-CG-TATTCGCCGCTA TTTATGGCACGCTGG TERM 1182 945126 - 945141 + G 81 -11.8 -3.52113 | overlap 945105 CGGATATCGACCGGG GCGGCG TATT CGCCGC TATTTATGGCACGCT cbiP 944621 - 946141 + | cobyric acid synthase cobU 946138 - 946683 + | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase TERM 1183 947098 - 947139 + G 100 -12.9 -4.75472 | gap 1 GAACGCCAATGTTGG CGGCGCTGGCGGTGGCCTGT GCG GCCGGACAC-GGCAGCGCCG TTTTATTGATGTACC cobS 946680 - 947423 + | cobalamin synthase cobT 947450 - 948520 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase erfK 948598 - 949527 + | hypothetical protein TERM 1184 949690 - 949661 - g 75 -6.3 -4.62783 | overlap 949662 TATGGATGCCAAAAA GCCCGGCAAACCT TATC AGGTCAACCGGGT AAAGATAAGTTCTTA TERM 1185 949689 - 949662 - g 70 -9.8 -3.37188 | overlap 949661 ATGGATGCCAAAAAG CCCGGCAAACCT TATC AGGTCAACCGGG TAAAGATAAGTTCTT SPA0857 949578 - 949748 + | hypothetical protein TERM 1186 951367 - 951383 + F 76 -7.9 -4.27617 | overlap 951369 TGTTTCTTGACTGGG CCGTGCG TGG CGCACTG TTTTACTGGCGTCTG TERM 1187 951369 - 951381 + F 76 -9.1 -3.73756 | overlap 951367 TTTCTTGACTGGGCC GTGCG TGG CGCAC TGTTTTACTGGCGTC TERM 1188 951726 - 951753 + F 91 -7.6 -5.22312 | AAGAACTTATCTTTA CCCGGTTGGCCT GAGA AGGTTTGCCGGG TTTTTTGATATCCAT SPA0861 952160 - 952546 + | hypothetical protein SPA0862 952540 - 952866 + | hypothetical protein SPA0863 953016 - 952855 - | hypothetical protein TERM 1189 954308 - 954331 + G 83 -8 -4.40003 | overlap 954309 954311 CCCAGGGCTATCGCT TCCGCGTGCC TTAC GGCACGCTGC TTTGTGTTTCTGACA TERM 1190 954309 - 954330 + G 74 -11.5 -3.23279 | overlap 954308 954311 CCAGGGCTATCGCTT CCGCGTGCC TTAC GGCACGCTG CTTTGTGTTTCTGAC TERM 1191 954311 - 954328 + G 83 -12.7 -3.16835 | overlap 954309 954308 AGGGCTATCGCTTCC GCGTGCC TTAC GGCACGC TGCTTTGTGTTTCTG amn 953062 - 954516 + | AMP nucleosidase TERM 1192 954589 - 954632 + F 83 -13.2 -3.29461 | opp_overlap 954593, overlap 954592 954593 TGGAAAGTGGTTGAA TGAAGCCTTAGCGGGAGGTG ATTC TGCATCCCGCTAAGGCCTTA TTGTGCCGCGGCTTC TERM 1193 954592 - 954629 + F 93 -12.7 -3.78934 | opp_overlap 954593, overlap 954589 954593 AAAGTGGTTGAATGA AGCCTTAGCGGGAGGTG ATTC TGCATCCCGCTAAGGCC TTATTGTGCCGCGGC TERM 1194 954628 - 954593 - f 93 -14.8 -3.34192 | opp_overlap 954592 954589 954593 AAGTGGTTGAATGAA GCCTTAGCGGGAGG TGATTCTG CATCCCGCTAAGGC CTTATTGTGCCGCGG TERM 1195 954593 - 954628 + F 93 -16.2 -2.87146 | opp_overlap 954593, overlap 954592 954589 AAGTGGTTGAATGAA GCCTTAGCGGGAGGTG ATTC TGCATCCCGCTAAGGC CTTATTGTGCCGCGG TERM 1196 955193 - 955181 - f 73 -4.1 -4.82901 | GTTTGCTGACAAAAA CAACA AAG CGTTG AAGTTTTGATCTAAT SPA0866 955216 - 955389 + | hypothetical protein SPA0867 955392 - 955568 + | hypothetical protein TERM 1197 955638 - 955601 - T 76 -8.5 -4.06678 | opp_overlap 955604 955605 955609, overlap 955605 955609 ATCGATTGATATAAA TGCAGAAAGCAGACGTC AGTG AACGTCTGCTTTCCTTA ATTTGGCTCCTCTGA TERM 1198 955604 - 955635 + T 86 -11.7 -3.55122 | opp_overlap 955601 955605 955609, overlap 955605 955609 GATTGATATAAATGC AGAAAGCAGACGT CAGTGA ACGTCTGCTTTCC TTAATTTGGCTCCTC TERM 1199 955605 - 955634 + T 90 -15.2 -2.72591 | opp_overlap 955601 955605 955609, overlap 955604 955609 ATTGATATAAATGCA GAAAGCAGACGT CAGTGA ACGTCTGCTTTC CTTAATTTGGCTCCT TERM 1200 955634 - 955605 - T 90 -15.9 -2.73797 | opp_overlap 955605 955604 955609, overlap 955601 955609 ATTGATATAAATGCA GAAAGCAGACGTC AGTG AACGTCTGCTTTC CTTAATTTGGCTCCT TERM 1201 955609 - 955630 + T 87 -10.2 -4.04394 | opp_overlap 955605 955601 955609, overlap 955605 955604 ATATAAATGCAGAAA GCAGACGT CAGTGA ACGTCTGC TTTCCTTAATTTGGC TERM 1202 955630 - 955609 - T 89 -10.9 -4.04922 | opp_overlap 955609 955605 955604, overlap 955605 955601 ATATAAATGCAGAAA GCAGACGTC AGTG AACGTCTGC TTTCCTTAATTTGGC yeeI 956615 - 955818 - | hypothetical protein TERM 1203 955918 - 955906 - G 71 -4.8 -4.63542 | overlap 955897 TAGAACTGGCAAAAA CGCT GCCAT AGCG CCGGGAAACGTGGAG SPA0871 957096 - 957257 + | hypothetical protein umuD 957384 - 957803 + | DNA polymerase V subunit UmuD TERM 1204 958829 - 958803 - g 71 -5.9 -4.37658 | gap 1 AATGTCTGGATAAAA TCTGGC-GCGAC GGCC ATCGCTACCAGA AAGCGGGGGTGATGC umuC 957806 - 959074 + | DNA polymerase V subunit UmuC cspB 959520 - 959732 + | cold shock protein TERM 1205 959818 - 959793 - T 71 -9.9 -3.21924 | gap 1, opp_overlap 959798, overlap 959798 CCATGGTTCACAATA CAG-AACATCGA CAT TCGATGTTACTG AGCAAAACCCGTTTG TERM 1206 959812 - 959798 - T 72 -8.6 -3.72788 | opp_overlap 959798, overlap 959793 GTTCACAATACAGAA CATCGA CAT TCGATG TTACTGAGCAAAACC TERM 1207 959941 - 959955 + T 91 -7.1 -5.60993 | opp_overlap 959941 AAATAATTCATATTA GCTCC GTACA GGAGC TTTTTTTATGCCCGG TERM 1208 960175 - 960151 - T 100 -17.9 -3.78934 | opp_overlap 960154, overlap 960154 CTTGCCCTATAATAA CAAGCCCGCGC TAA GCACGGGCTTG AATAACATAAAGCGT TERM 1209 960154 - 960172 + T 78 -11.6 -3.06796 | opp_overlap 960151 960154 GCCCTATAATAACAA GCCCGCGC TAA GCACGGGC TTGAATAACATAAAG TERM 1210 960172 - 960154 - T 100 -13.8 -4.02817 | opp_overlap 960154, overlap 960151 GCCCTATAATAACAA GCCCGCGC TAA GCACGGGC TTGAATAACATAAAG ompS 961370 - 960192 - | outer membrane protein S1 TERM 1211 961693 - 961678 - H 100 -10.4 -6.04378 | opp_overlap 961678 AAAGCATAAAAAAAA CCGGCA TAAA TGCCGG TAATGTGGGTAATGA TERM 1212 961678 - 961693 + H 71 -10.4 -2.65264 | opp_overlap 961678 AAAGCATAAAAAAAA CCGGCA TAAA TGCCGG TAATGTGGGTAATGA TERM 1213 962293 - 962277 - H 74 -5.7 -4.56597 | CCGGCCTCGCAAAAA CAGGGGG TAT CCCGCCG ACACTCAGCCAGAAA yedJ 962411 - 963106 + | hypothetical protein TERM 1214 963780 - 963758 - g 76 -3.2 -5.06414 | opp_overlap 963759, overlap 963759 963760 CGTTTCCAAGAAAAA TGCGCTGGGC CGC GCCCACGGCT TTGCCTGCGAGACTC TERM 1215 964215 - 964205 - g 71 -4.6 -4.62069 | overlap 964208 TCGCTACGCGAAAAA GCAC CAG GCGC GGGGAAACGGTTTTG dcm 963180 - 964610 + | DNA cytosine methylase TERM 1216 965034 - 964998 - g 76 -12.4 -3.02144 | gap 2, opp_overlap 964987 964986 GGAGCGCCTGGAAGA GTGGATCTGCG-GC-GGC GGC GCCAGCGCGCAGATCGAC ACCCAGGGGATTCAT vsr 964591 - 965061 + | patch repair protein yedA 965970 - 965050 - | hypothetical protein TERM 1217 966077 - 966062 - H 72 -3.2 -5.06414 | opp_overlap 966070 CTTTTGGAATAAAAA GGCG TTGACCCG CGCC GCCGGTTTCGGCATT yedI 966146 - 967057 + | hypothetical protein SPA0882 967074 - 967319 + | hypothetical protein TERM 1218 967344 - 967325 - f 100 -12.1 -4.4648 | opp_overlap 967325 AGCCCGATGACAAAA CGCCCGG TTAATG CCGGGCG TTTTGCTGTGGAGAA TERM 1219 967325 - 967344 + F 95 -12.8 -4.34402 | opp_overlap 967325 AGCCCGATGACAAAA CGCCCGGT TAAT GCCGGGCG TTTTGCTGTGGAGAA TERM 1220 968132 - 968152 + G 70 -8.9 -3.64703 | opp_overlap 968123 968135, overlap 968135 968140 AGCCAACGGCGTAAC CCACAGCGC GGC GTGCGGTGG TTTACCTCCGCACAG SPA0883 967484 - 969196 + | hypothetical protein yedP 969990 - 969175 - | mannosyl-3-phosphoglycerate phosphatase TERM 1221 970263 - 970283 + r 100 -12.5 -5.41746 | overlap 970275 970276 CATAAGCAAGTTTGA TCCCGACCC GTA GGGCCGGGA TTTTTTTCGGCCATT yodD 970527 - 970300 - | hypothetical protein TERM 1222 970709 - 970687 - g 100 -16.2 -4.14392 | GGGTAACCGTTAAAA CGGACGGCGG TCC CCGCCGACCG GGCGTGGTACTGGCA dsrB 970653 - 970850 + | hypothetical protein rcsA 971512 - 970889 - | colanic acid capsullar biosynthesis activation protein A fliR 972588 - 971794 - | flagellar biosynthesis protein FliR fliQ 972866 - 972597 - | flagellar biosynthesis protein FliQ fliP 973613 - 972876 - | flagellar biosynthesis protein FliP TERM 1223 973488 - 973478 - G 74 -6.8 -4.26903 | opp_overlap 973485 GCGAGGTGATGAAAA CCAG CGT CTGG ACGGATAATGACCAG fliO 973990 - 973613 - | flagellar biosynthesis protein FliO TERM 1224 973942 - 973916 - G 70 -9.5 -3.38727 | gap 1, overlap 973897 973917 AATAATGCCAATTAA TGCGCCGCTCAC CTGC ATGAGCGGCG-A TCCGGCTGGCGCGGT fliN 974403 - 973990 - | flagellar motor switch protein FliN TERM 1225 974270 - 974306 + g 86 -7.2 -4.73613 | gap 1, opp_overlap 974292, overlap 974271 GCACCGCTGACATCG CCGCCGCC-AAGCTGTT GGAA AACCGCGTCGGCGGCGC TTTTATTGGTGGTCG TERM 1226 974271 - 974305 + g 73 -10.7 -3.43445 | gap 1, opp_overlap 974292, overlap 974270 CACCGCTGACATCGC CGCCGCC-AAGCTGTT GGAA AACCGCGTCGGCGGCG CTTTTATTGGTGGTC TERM 1227 974303 - 974292 - G 74 -7.2 -4.08692 | opp_overlap 974271 974270 CAAGCTGTTGGAAAA CCGC GTCG GCGG CGCTTTTATTGGTGG fliM 975404 - 974400 - | flagellar motor switch protein FliM TERM 1228 975009 - 974998 - G 74 -7.2 -4.07687 | overlap 974999 ACTTTGGTCGGAAAA CGGC CGTC GCCG CCGAACAGGTTATCG fliL 975876 - 975409 - | flagellar basal body-associated protein FliL TERM 1229 975734 - 975709 - G 80 -4.5 -5.05782 | opp_overlap 975723, overlap 975711 ATCCAGCGCAAAAAA TACCGGCGCGG GCGG CGGAGCCGGTT CCGCTTTAGCGTTCG TERM 1230 975732 - 975711 - G 70 -7.1 -4.15748 | opp_overlap 975723, overlap 975709 CCAGCGCAAAAAATA CCGGCGCGG GCGG CGGAGCCGG TTCCGCTTTAGCGTT TERM 1231 975839 - 975850 + g 84 -5.8 -5.1356 | opp_overlap 975838 AAAGGTATCCAAATC GAGC GTTT GCTC TTTTTGTTAATCGCG fliK 977204 - 975981 - | flagellar hook-length control protein TERM 1232 976574 - 976615 + g 70 -5 -4.49644 | gap 2, overlap 976582 GCGTCAGTGCTGGAC CCGTGGCG-CGATCGT-CGC TGGC GCGCGCAAGCGACGCCTCGG TTTTCCCTTTTTCAT fliJ 977644 - 977201 - | flagellar biosynthesis chaperone fliI 979036 - 977666 - | flagellum-specific ATP synthase fliH 979743 - 979036 - | flagellar assembly protein H fliG 980731 - 979736 - | flagellar motor switch protein G fliF 982415 - 980724 - | flagellar MS-ring protein TERM 1233 981160 - 981145 - G 72 -2.5 -4.91109 | CGTTTATCAGAAAAA CCCAT CGCTTC ACGGG TTAAATCCTCGATCT fliE 982632 - 982946 + | flagellar hook-basal body protein FliE SPA0903 983420 - 983067 - | hypothetical protein TERM 1234 983714 - 983684 - R 74 -6 -4.58395 | opp_overlap 983684, overlap 983685 983686 GTTATGCCGTAAAAA GGTCTCCCGCCGTA ACG TACAGCGGGAGTAT GCGCTTATTTTTGAA TERM 1235 983713 - 983685 - R 73 -9.5 -3.34716 | opp_overlap 983684, overlap 983684 983686 TTATGCCGTAAAAAG GTCTCCCGCCGTA ACG TACAGCGGGAGTA TGCGCTTATTTTTGA TERM 1236 983712 - 983686 - R 81 -13 -2.60508 | opp_overlap 983684, overlap 983685 983684 TATGCCGTAAAAAGG TCTCCCGCCGTA ACG TACAGCGGGAGT ATGCGCTTATTTTTG yedF 983952 - 983719 - | hypothetical protein yedE 985214 - 983949 - | putative inner membrane protein TERM 1237 984771 - 984747 - G 77 -4.1 -5.0133 | GATTCCGGTAAAAAA GGCGGCCAGGT TAC ACCCCATCGCC AGACGCGCGCCGAAG TERM 1238 985022 - 985001 - G 80 -8.7 -4.20883 | opp_overlap 985005 CAAAAAGCTGCAAAA TTTGCCCGC CCCA GCGGGTAAA TTCGCCCGTCACGGC TERM 1239 985436 - 985422 - g 70 -7 -4.08945 | ATGATGTGGTGAAAA CGCCCG CGC CGGCCG GTCTGGAAGGGTACT yedD 985340 - 985741 + | hypothetical protein TERM 1240 985738 - 985728 - T 73 -2.4 -5.24129 | opp_overlap 985708, overlap 985729 985730 CCGCGTTAGAAAAAA CGCC GCT GCCG TAATTTCGCTTCCCG amyA 987265 - 985781 - | cytoplasmic alpha-amylase TERM 1241 986914 - 986929 + g 74 -4.7 -4.8048 | CCTGATTCACGCGCT GAACG CGAATA CGTTC TTTTTCGTCTGCGCC TERM 1242 987011 - 987025 + g 82 -11.4 -3.88559 | opp_overlap 987020, overlap 986998 987021 GAGCGCGTCTATCGC CGCCAG TAA CTGGCG TTTATCGCCGTACTT TERM 1243 987264 - 987313 + g 100 -16.6 -4.25104 | opp_overlap 987282, overlap 987265 AACGTGGGGTTTTTC ATCTTCCGTGCTCCAGAAGTCG TTTAGC CGACCTCTGGAGTATGGAAGAA TTTTCATACGAGACG TERM 1244 987265 - 987312 + r 100 -20.1 -3.14848 | opp_overlap 987282, overlap 987264 ACGTGGGGTTTTTCA TCTTCCGTGCTCCAGAAGTCG TTTAGC CGACCTCTGGAGTATGGAAGA ATTTTCATACGAGAC TERM 1245 987363 - 987344 - R 73 -10 -3.32807 | GGAAAATATTATGAA GCGCCAGA TGCG TCTGGCAC GAGTAACATACCGGA fliT 987705 - 987337 - | flagellar biosynthesis protein FliT fliS 988112 - 987705 - | flagellar protein FliS fliD 989530 - 988127 - | flagellar capping protein TERM 1246 989656 - 989641 - H 71 -7.5 -3.95555 | ATAATGATGCATAAA GCGGC TATTTC GCCGC CTAAGAAAAAGATCG TERM 1247 990209 - 990195 - g 71 -10 -3.55622 | TTCAACGGCGTGAAA GTCCTG GCG CAGGAC AACACCCTGACCATC fliC 989787 - 991274 + | flagellin TERM 1248 991328 - 991313 - f 79 -10.4 -3.49618 | opp_overlap 991313 GTGGTACACAATCAA GGCAGC GAAA GCTGCC TTTTTTAATTCCGGA TERM 1249 991313 - 991328 + F 100 -10.4 -5.26875 | opp_overlap 991313 GTGGTACACAATCAA GGCAGC GAAA GCTGCC TTTTTTAATTCCGGA TERM 1250 992313 - 992292 - f 72 -5.9 -4.386 | overlap 992293 TAATTCTCTATAAAA TTTGGGAAA ATAA TTTCCCCAA CCAGCCGAATGTCGA TERM 1251 992565 - 992588 + F 87 -10.2 -4.04318 | TGACATAGTTTTGTT CGGGGTGGGC TTTT GCGCATCCCG TTTATCCTATCTGGC fliA 992754 - 993473 + | flagellar biosynthesis sigma factor fliZ 993532 - 994083 + | protein FliZ fliY 994230 - 995030 + | cystine transporter subunit TERM 1252 995100 - 995117 + F 89 -5.5 -5.67283 | gap 1, opp_overlap 995100 ATGTCAGCAAACGGA GGCGCGTG AAT CG-GCGCC TTTTTTATTTCCGTT yedO 995184 - 996170 + | D-cysteine desulfhydrase yecS 996191 - 996859 + | putative ABC transporter membrane protein yecC 996856 - 997608 + | putative amino-acid ABC transporter ATP-binding protein YecC sdiA 997841 - 998563 + | DNA-binding transcriptional activator SdiA TERM 1253 998622 - 998596 - T 88 -12.2 -3.63627 | opp_overlap 998596 998611 GCGCCAGACGCGAAA CCGGCTGAAAGC GAT GCTAACAGCCGG TTTTTTACTACTGGC TERM 1254 998596 - 998622 + T 100 -12.2 -5.1861 | opp_overlap 998596, overlap 998611 GCGCCAGACGCGAAA CCGGCTGAAAGC GAT GCTAACAGCCGG TTTTTTACTACTGGC yecF 998854 - 998630 - | hypothetical protein SPA0921 999006 - 998851 - | hypothetical protein sirA 999318 - 999974 + | response regulator TERM 1255 1001019 - 1001009 - g 71 -4.6 -4.53303 | opp_overlap 1001012, overlap 1001010 1001011 CATGTTCAGACAAAA CCGC GCG GCGA TCGCGCCCGTTATCT TERM 1256 1001390 - 1001378 - g 70 -6.9 -4.09864 | ATCGACGGCGGAAAA GGGCA GCT CGCCC AGGCGAAAGCCGTTT uvrC 999971 - 1001803 + | excinuclease ABC subunit C TERM 1257 1001960 - 1001971 + G 71 -4.4 -4.67943 | overlap 1001948 1001946 CCTGGGCGCCGATGG TCAG CGCG CTGA TTTTCTGTATTGCCG pgsA 1001860 - 1002408 + | phosphatidylglycerophosphate synthetase TERM 1258 1002602 - 1002586 - f 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 1259 1002690 - 1002675 - f 73 -7.6 -4.07885 | GATGCTGGCTGAAAA GCCAAA AAAA TTTGGC GCGTTAACAAAGCGG TERM 1260 1002818 - 1002798 - f 72 -10.5 -2.89742 | overlap 1002801 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG GCGTTCGCGCTGTGC TERM 1261 1002904 - 1002917 + F 100 -8.1 -5.75599 | opp_overlap 1002904 AGCAGTGTCGTGAAA CCACC TACG GGTGG TTTTTTTGTGCTTTC SPA0928 1003109 - 1003441 + | putative inner membrane protein TERM 1262 1004825 - 1004812 - g 72 -2.3 -4.87665 | opp_overlap 1004812 TCTTAGTCATAAAAA TCCCC AAAT GCGGA TCGATTATCTCACCA SPA0929 1003661 - 1005094 + | hypothetical protein SPA0930 1005307 - 1005633 + | putative glucose-6-phosphate dehydrogenase yecA 1005872 - 1006537 + | hypothetical protein TERM 1263 1006564 - 1006600 + T 100 -18.1 -3.66874 | CGGCCATAGCGTGAT GATTATCGAGCCTGGAC GGC GTCCGGGCCCGGTAATC TTTGCCTGGCGTTAA tyrP 1007823 - 1006612 - | tyrosine-specific transport protein TERM 1264 1006703 - 1006684 - G 85 -11.4 -4.03978 | AATGCCGCAGATAAA CACCAGCG CCAG CGCTGGCG TGCCGCCTGCCACAC TERM 1265 1006862 - 1006852 - G 71 -8.2 -3.786 | overlap 1006853 GTAGAAAAGCGCAAA CGCC AGC GGCG GCAGAAAGGTAATCA yecH 1008050 - 1008289 + | hypothetical protein ftnA 1008832 - 1008335 - | ferritin TERM 1266 1009014 - 1008995 - R 87 -10 -4.35747 | TAAAAATAAAGGAAA GCCAGCAC CTTC ATGCTGGC AATAGCGACCCTGCA TERM 1267 1009087 - 1009066 - R 73 -10.9 -2.52464 | opp_overlap 1009048 1009065 1009064 1009063 GTCGGCGTTAAGCCA GCCGCCTTA ATAA TAAAGCGGC ATGATTTGCGGGACG SPA0935 1009407 - 1009072 - | putative lipoprotein TERM 1268 1009553 - 1009577 + r 93 -11.7 -3.76607 | opp_overlap 1009558, overlap 1009548 1009547 GTGAGCGTCTTTTCA TTTAATGAAAC TTT GTTTCATTAAA TTTGAATGTGTGTTC yecI 1010241 - 1009738 - | ferritin-like protein araH 1010791 - 1011348 + | putative intracellular protease/amidase SPA0938 1011460 - 1011642 + | hypothetical protein TERM 1269 1011737 - 1011771 + F 100 -14.4 -3.91897 | gap 1, overlap 1011738 1011739 ACAGTATAGCTTCAC G-TCATCGCCAGCCG CTACCC CGGCTGGCGATGGTC TTTCTAAATGGCGAG TERM 1270 1011738 - 1011769 + F 100 -18.1 -3.5511 | overlap 1011737 1011739 CAGTATAGCTTCACG TCATCGCCAGCCG CTACCC CGGCTGGCGATGG TCTTTCTAAATGGCG TERM 1271 1011739 - 1011768 + F 100 -19.4 -2.72745 | overlap 1011738 1011737 AGTATAGCTTCACGT CATCGCCAGCCG CTACCC CGGCTGGCGATG GTCTTTCTAAATGGC TERM 1272 1012430 - 1012444 + GF 82 -7.1 -4.82901 | AGGAGGCGCCCTTTG CGGGA CGGAT TCCCG TTTTTGTGGGCGACG otsB 1011865 - 1012668 + | trehalose-6-phosphate phosphatase TERM 1273 1012714 - 1012694 - gT 81 -8.1 -4.30719 | opp_overlap 1012699 1012701 1012701, overlap 1012696 CCCCCGGATAATAAA GGCGGCGCC GGC GGCCTCGCC GTTGGCGTGCTTGGC TERM 1274 1012699 - 1012721 + GT 86 -14.8 -2.71364 | opp_overlap 1012694 1012696, overlap 1012701 1012701 GGATAATAAAGGCGG CGCCGGCGGC CTC GCCGTTGGCG TGCTTGGCGCGCTAA TERM 1275 1013963 - 1013976 + GT 72 -3.8 -4.71828 | opp_overlap 1013963 AAAAATGACATTAAC CGCT GGCAGG AGCG TTTTATTCATGACCT otsA 1012643 - 1014064 + | trehalose-6-phosphate synthase yecG 1014510 - 1014082 - | universal stress protein UspC SPA0942 1014623 - 1014507 - | hypothetical protein TERM 1276 1015013 - 1015032 + H 79 -8 -4.4009 | opp_overlap 1015012 1015013 1015015 AGTATTCTGTTAAAT TATGTGAT CTAC ATCACATA TTTTCTAAAATCGCC flhD 1015297 - 1015647 + | transcriptional activator FlhD flhC 1015644 - 1016228 + | transcriptional activator FlhC TERM 1277 1016255 - 1016278 + F 100 -15.4 -6.15259 | opp_overlap 1016251 1016250 TGGACAAACACTCCA GCAGCGGTAA GTTA TTACCGCTGC TTTTTTTTTGCCTTG motA 1016354 - 1017241 + | flagellar motor protein MotA TERM 1278 1017301 - 1017274 - g 70 -6.9 -4.07687 | gap 1, overlap 1017289 1017290 ATTGTCGTCGTAAAA CGCCGCAG-GCA CAAAC CGCACGGCGGCG GGGCGCACGGTTCCT TERM 1279 1017299 - 1017289 - g 71 -8.2 -3.91897 | overlap 1017274 1017290 CGCCGCAGGCACAAA CCGC ACG GCGG CGGGGCGCACGGTTC TERM 1280 1017740 - 1017728 - g 70 -6.9 -4.11216 | overlap 1017729 GCCCGATGTTTAAAA CCGGC AGC GCCGA AGTTGAGCCGTATAT motB 1017238 - 1018167 + | flagellar motor protein MotB TERM 1281 1018913 - 1018899 - g 70 -3.4 -4.6821 | opp_overlap 1018908, overlap 1018903 AAGCGCAAGAGAAAA CCGAGG TAG CGCCGG TAGCGCCTCCGGCAG TERM 1282 1019407 - 1019396 - g 83 -7.2 -4.60924 | GAAATGCCGGAAAAA CGCC TTGA GGCG GGGAAAAATGTTGTC cheA 1018172 - 1020187 + | chemotaxis protein CheA TERM 1283 1020665 - 1020655 - g 70 -3.2 -4.74706 | GTGAATATCGAAAAA CTGC TTA ACAG CGAAGAGATGGCGCT cheW 1020208 - 1020711 + | purine-binding chemotaxis protein TERM 1284 1020747 - 1020715 - f 100 -18.5 -3.61715 | opp_overlap 1020707 1020717, overlap 1020716 CACGTCGCGTAATAA CGTTGCCGGATGGCG TCG CGCCATCCGGCAATA TTCACCGTTATGCTT TERM 1285 1020746 - 1020716 - f 100 -19.8 -2.76815 | opp_overlap 1020707 1020717, overlap 1020715 ACGTCGCGTAATAAC GTTGCCGGATGGCG TCG CGCCATCCGGCAAT ATTCACCGTTATGCT TERM 1286 1020717 - 1020745 + F 100 -23.3 -3.07233 | opp_overlap 1020716 1020715, overlap 1020707 CGTCGCGTAATAACG TTGCCGGATGGCG TCG CGCCATCCGGCAA TATTCACCGTTATGC TERM 1287 1022038 - 1022020 - f 84 -5.2 -5.42862 | opp_overlap 1022021, overlap 1022021 ACAGTTCGAAAAAAA TCGCTGAC ATT ATCAGCGT TATCGACGGTATTGC TERM 1288 1022037 - 1022021 - f 74 -8.7 -3.84633 | opp_overlap 1022021, overlap 1022020 CAGTTCGAAAAAAAT CGCTGAC ATT ATCAGCG TTATCGACGGTATTG TERM 1289 1022538 - 1022524 - g 71 -11.4 -2.88999 | opp_overlap 1022525 1022526, overlap 1022526 TTGTTACAGATGACA CAGCGC CTC GCGCTG TCCGACGCGCATTTT TERM 1290 1023020 - 1022996 - g 74 -7.1 -4.28774 | opp_overlap 1022996 TCAGCGAACTGAAAA CGTTATCGCCG CAG CAGCTACAACG TTACTTCATGCGCGG cheR 1022473 - 1023339 + | chemotaxis methyltransferase CheR cheB 1023336 - 1024385 + | chemotaxis-specific methylesterase cheY 1024403 - 1024792 + | chemotaxis regulatory protein CheY cheZ 1024803 - 1025447 + | chemotaxis regulator CheZ TERM 1291 1025500 - 1025531 + F 82 -13.1 -3.10493 | opp_overlap 1025499, overlap 1025481 GAATCCGTCAACCAG GCCGGATACGAGA CTTTCT TATCGTATCCGGC TATCTCTATTAACGC TERM 1292 1026038 - 1026027 - g 71 -7.2 -4.06055 | ATTTTCTAAATTAAA CCCG CTGC CGGG AATTAAGCGCATGTT TERM 1293 1026741 - 1026761 + G 74 -6.8 -4.36914 | opp_overlap 1026739 ACAACCTGAGAACCT TCCGGTGC CAGAA GCGCTGGA TTTTATGAACGAGAA flhB 1025641 - 1026792 + | flagellar biosynthesis protein FlhB TERM 1294 1027698 - 1027720 + G 79 -2.7 -5.18355 | overlap 1027700 GGCTGCTTGGCATGG TGCCAGG AATGCCTAA CCTGGTA TTTTTACTTTTTACC TERM 1295 1027796 - 1027784 - g 80 -4.7 -5.06414 | GGGCGTGAAGAAAAA GCGCC AGA GGAGC CGCAGCCGGTAAAAA flhA 1026785 - 1028863 + | flagellar biosynthesis protein FlhA flhE 1028863 - 1029255 + | flagellar protein FlhE precursor TERM 1296 1029329 - 1029305 - T 83 -9.9 -4.15044 | opp_overlap 1029308, overlap 1029307 1029308 CTCTTTTTGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAGATGCGCCTGT TERM 1297 1029327 - 1029307 - T 93 -12.5 -3.6761 | opp_overlap 1029308, overlap 1029305 1029308 CTTTTTGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAGATGCGCCT TERM 1298 1029308 - 1029326 + T 100 -16 -4.62069 | opp_overlap 1029307 1029305 1029308 TTTTTGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC TERM 1299 1029326 - 1029308 - T 93 -16 -2.80244 | opp_overlap 1029308, overlap 1029307 1029305 TTTTTGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC tnpA 1029866 - 1029408 - | transposase for insertion sequence element IS200 TERM 1300 1029979 - 1029997 + H 100 -16 -4.18197 | opp_overlap 1029969 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAT TERM 1301 1030041 - 1030022 - H 70 -5 -4.48483 | GACAATAAATAGAAA CACCGTTT TATA AAATGGTG AGGTAGGTTGCCGGA SPA0958 1030206 - 1031342 + | hypothetical protein SPA0959 1033267 - 1031396 - | hypothetical protein TERM 1302 1031473 - 1031498 + g 86 -10.3 -4.09685 | TTCGCATGATGGGCG CGGCGGTAACG CCGT CGCTTCCGCCG TTTTCCAGAATCAAG TERM 1303 1031943 - 1031956 + g 78 -2.3 -5.24129 | opp_overlap 1031935, overlap 1031934 1031944 ACAGAGATGGTATCG CCCTG ATAC CAGGC TTTTTTATGGACCCG TERM 1304 1032125 - 1032110 - G 74 -3.2 -4.9792 | GACCTGATAGAAAAA GGTATC CGCA GATTCC TCAATCGCTTTAGTG TERM 1305 1033432 - 1033404 - R 100 -14.6 -5.06414 | opp_overlap 1033401 1033398 CTGTGGCAATAAAAA GGCCTGAGTCCG TTACC CGGAGTCAGGCC TGATGATGTTAACGA argS 1035189 - 1033456 - | arginyl-tRNA synthetase yecM 1035426 - 1035995 + | hypothetical protein TERM 1306 1036103 - 1036138 + G 76 -11.9 -3.02144 | opp_overlap 1036074 1036111, overlap 1036115 TCGAACTGTGCGCCG CGCCGAAAGAAGGAG GGCTTA CGCCTTCTTTCGGCA TCTTACGCAGCGTAC TERM 1307 1036365 - 1036343 - g 71 -4.6 -4.67173 | overlap 1036344 1036346 GAATGGAAAAAATAA TGACGGCGGC CGG GCCGCTGGCG GTGACATTCCACCGC TERM 1308 1036478 - 1036468 - g 87 -8.2 -4.56775 | ACTTCCGGGCAAAAA GCCG ATG CGGC GCAAGGTTTATCAAT cutC 1036015 - 1036761 + | copper homeostasis protein CutC TERM 1309 1036810 - 1036832 + T 100 -7.7 -5.71983 | GCTTGCTCGTACCAG GCCCCTG CCAATTCAA CAGGGGC TTTTTTTCTCCTTCA TERM 1310 1036883 - 1036916 + T 86 -10.9 -3.794 | overlap 1036884 TTGGCCGCCTCGCGC ACCCCGGTCACGTAG CTAC CTACGTTCCCGGGGA TTTGCTGCGTTGCCG TERM 1311 1036884 - 1036915 + T 87 -14.4 -2.87319 | overlap 1036883 TGGCCGCCTCGCGCA CCCCGGTCACGTAG CTAC CTACGTTCCCGGGG ATTTGCTGCGTTGCC yecP 1037967 - 1036996 - | hypothetical protein yecO 1038707 - 1037964 - | hypothetical protein TERM 1312 1038042 - 1038062 + g 74 -6.7 -4.27886 | opp_overlap 1038043, overlap 1038043 TTCGCTGTGTTCGAA ACCCGCCTG ACG CAGGCGCGC TTTATGTGTTTCCAC TERM 1313 1038061 - 1038043 - G 74 -10.2 -3.53012 | opp_overlap 1038042 1038043 TCGCTGTGTTCGAAA CCCGCCTG ACG CAGGCGCG CTTTATGTGTTTCCA TERM 1314 1038749 - 1038733 - R 71 -3.6 -4.85782 | overlap 1038734 TCCGGGAAAAATAAA GGCGCA TATTG TGCGCT AATACAGGGAGAAAA yecN 1039143 - 1038748 - | hypothetical protein TERM 1315 1039060 - 1039037 - G 88 -11 -4.11484 | gap 1, opp_overlap 1039034 TGCAATTCGCTAAAA CCGCCGTCGCC ATA GGCGACA-CGG TACTGCATTCGCAAG yecE 1040014 - 1039196 - | hypothetical protein TERM 1316 1039352 - 1039329 - G 74 -2.2 -4.98672 | opp_overlap 1039340, overlap 1039330 TGTAAAAACAGAAAA GGCGTGGTGG TCTG CCGCCACTGC GGGAGTTTCTGCAAC TERM 1317 1039851 - 1039839 - G 80 -4.8 -5.01042 | opp_overlap 1039839 AATTTAAAGCAAAAA CGGA AATCG TCCG TAGTTTGCGCATACC yecD 1040577 - 1040011 - | hypothetical protein aspS 1040902 - 1042674 + | aspartyl-tRNA synthetase ntpA 1042777 - 1043229 + | dATP pyrophosphohydrolase TERM 1318 1043219 - 1043239 + F 79 -3.2 -5.40474 | gap 1, opp_overlap 1043220, overlap 1043220 AAGAGTTTGTCATTA ACGTCGCCT GAAA AGGCG-CGC TTTTTTTGAGGAAAT yebC 1043259 - 1043999 + | hypothetical protein ruvC 1044036 - 1044557 + | Holliday junction resolvase TERM 1319 1044566 - 1044586 + T 83 -9 -4.27316 | GCGCTAAATTATTCT CCCTCAGC CTCGC GTTGAGGG TTTTCAATTCCACAG yebB 1045158 - 1044559 - | hypothetical protein SPA0973 1045386 - 1046060 + | hypothetical protein TERM 1320 1046351 - 1046366 + F 79 -7.6 -4.47611 | opp_overlap 1046341 ATAAGTGTTTTTCAT CTGGAT AAAC ATCCAG TCTTTTTTTATGATA ruvA 1046420 - 1047031 + | Holliday junction DNA helicase motor protein ruvB 1047040 - 1048050 + | Holliday junction DNA helicase B znuB 1048914 - 1048129 - | high-affinity zinc transporter membrane component TERM 1321 1048648 - 1048636 - G 80 -10.5 -3.82202 | CAGTCCTAAAGATAA GGCGC TGT GCGCC ATAATGCCCAGTAAG znuC 1049666 - 1048911 - | high-affinity zinc transporter ATPase TERM 1322 1049292 - 1049306 + g 73 -5.6 -4.65895 | CAGTACGCGCTGTGT CTCGCC GCC GGAGAG TTTTTGCATGGGCGC TERM 1323 1050162 - 1050147 - g 76 -5.4 -4.77036 | GCCGATGAGGAAAAA GGTGAC GTAC ATCACC ATCACGGCGAATATA znuA 1049745 - 1050689 + | high-affinity zinc transporter periplasmic component yebA 1050705 - 1052024 + | hypothetical protein TERM 1324 1052041 - 1052063 + F 100 -13.4 -5.8901 | opp_overlap 1052030 1052041 AAATGCGCTGACAGA GCCGGTACGC GAT GTGTGCCGGC TTTTTTGTTTTGTGT TERM 1325 1052488 - 1052472 - g 86 -3.7 -5.40072 | overlap 1052473 GCGGTCCGAAAAAAA TTCAACA GCG TGTTGAC TGGGAAGGTCTGGAG msbB 1052141 - 1053112 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 1326 1053139 - 1053114 - T 100 -14.9 -4.49958 | opp_overlap 1053118, overlap 1053118 ATCCCATCAAATAAA TAAAGCCTCTC GTAA GAGAGGCTTTA TGCTGACAAACCCTG TERM 1327 1053135 - 1053118 - T 100 -11.3 -4.80736 | opp_overlap 1053118, overlap 1053114 CATCAAATAAATAAA GCCTCTC GTAA GAGAGGC TTTATGCTGACAAAC TERM 1328 1053118 - 1053135 + T 87 -11.3 -3.96148 | opp_overlap 1053118 1053114 CATCAAATAAATAAA GCCTCTC GTAA GAGAGGC TTTATGCTGACAAAC pykA 1054627 - 1053185 - | pyruvate kinase hexR 1055620 - 1054751 - | DNA-binding transcriptional regulator HexR zwf 1055962 - 1057437 + | glucose-6-phosphate 1-dehydrogenase TERM 1329 1057517 - 1057542 + F 89 -5.4 -5.80364 | gap 1 TTTTTGCACTTTTAA GCCTCGTGTGG ATTCA CC-TGCGAGGC TTTTTTTATTACACT edd 1057672 - 1059483 + | phosphogluconate dehydratase eda 1059521 - 1060162 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 1330 1060268 - 1060231 - T 80 -6.4 -4.83615 | gap 2, opp_overlap 1060233 1060234, overlap 1060232 1060233 CAGGCCTGATAAAAA TGCGCTAACGTCGCCATC AGGC GATGGCG-CATTAGC-CT TTTACCGTCACGCGG TERM 1331 1060267 - 1060232 - T 75 -9.9 -3.49687 | gap 2, opp_overlap 1060233 1060234, overlap 1060231 1060233 AGGCCTGATAAAAAT GCGCTAACGTCGCCATC AGGC GATGGCG-CATTAGC-C TTTTACCGTCACGCG TERM 1332 1060233 - 1060267 + T 73 -7.9 -4.13767 | gap 1, opp_overlap 1060232 1060231 1060233, overlap 1060234 GGCCTGATAAAAATG CGCTAACGTCGCCATC AGGC GATGGCG-CATTAGCC TTTTACCGTCACGCG TERM 1333 1060234 - 1060266 + T 75 -11.4 -3.08046 | gap 1, opp_overlap 1060232 1060233 1060231, overlap 1060233 GCCTGATAAAAATGC GCTAACGTCGCCATC AGGC GATGGCG-CATTAGC CTTTTACCGTCACGC TERM 1334 1060282 - 1060292 + T 73 -4.6 -4.76312 | overlap 1060273 CTTTTACCGTCACGC GGCT GGC GGCC TTTTTCGCTCTTATC purT 1061440 - 1060262 - | phosphoribosylglycinamide formyltransferase 2 TERM 1335 1060367 - 1060353 - G 74 -11.4 -3.20345 | overlap 1060351 AACGCTACACCAAGA CGACGG GTG CCGTCG ATCTCAGGCTTACCA TERM 1336 1062136 - 1062120 - g 91 -3.6 -5.56568 | AGACGACCAAAAAAA GGTCGG GCAGG CTGACC CGGTCGCGTGGGTTA yebF 1061929 - 1062282 + | hypothetical protein yebE 1062376 - 1063035 + | hypothetical protein opdB 1063249 - 1065300 + | protease 2 TERM 1337 1065310 - 1065336 + T 74 -8.7 -3.89291 | gap 1, opp_overlap 1065302, overlap 1065311 GCATAGACGCGCGCG CCCGCAACGGCT TGTG AGC-GTCGCGGG TTATTGTGGTGTTCC exoX 1066035 - 1065337 - | exodeoxyribonuclease X SPA0992 1066715 - 1066059 - | hypothetical protein holE 1067053 - 1066823 - | DNA polymerase III subunit theta yobA 1067191 - 1067565 + | hypothetical protein TERM 1338 1068122 - 1068153 + G 78 -2.3 -5.24129 | gap 1, overlap 1068125 GTCAACATGCCATTA GCG-CCATGATGAG TTTTT CTCGTTATGGTCAC TTTTTTGTGGCGGGC SPA0995 1067566 - 1068441 + | putative cation transporter SPA0996 1068458 - 1068811 + | hypothetical protein TERM 1339 1068857 - 1068830 - f 100 -11.4 -5.45652 | opp_overlap 1068830 ATTTTTAATAAAAAA CCGTAAACCTTC ACGA AAAGGCTTACGG TTTTTTTATCTCTGA TERM 1340 1068830 - 1068857 + F 100 -8.5 -5.76633 | opp_overlap 1068830 ATTTTTAATAAAAAA CCGTAAACCTT CACGAA AAGGCTTACGG TTTTTTTATCTCTGA SPA0997 1068872 - 1068988 + | hypothetical protein TERM 1341 1069020 - 1069049 + F 91 -7.3 -5.54338 | gap 1, overlap 1069021 AAGAGCCATTTCCCT G-GACCGAATAC AGGAATC GTATTCGGTCTC TTTTTATTTTCCTTA TERM 1342 1069021 - 1069047 + F 95 -11 -4.37486 | overlap 1069020 AGAGCCATTTCCCTG GACCGAATAC AGGAATC GTATTCGGTC TCTTTTTATTTTCCT TERM 1343 1069404 - 1069437 + F 76 -5.1 -4.81685 | overlap 1069406 TACAAATTTCTTTGT CAGCCCATCCGGG TGAATATT CCCGGTCGGGCTA TTTTTCCTGATTCCT TERM 1344 1069406 - 1069435 + F 73 -7.7 -4.02049 | overlap 1069404 CAAATTTCTTTGTCA GCCCATCCGGG TGAATATT CCCGGTCGGGC TATTTTTCCTGATTC TERM 1345 1069700 - 1069686 - f 70 -10 -3.07227 | opp_overlap 1069698 GGAGGAAACCACACA GGCAGA TGT TCTGCC GCCGTCCGCGTGGCG SPA0999 1071090 - 1071422 + | hypothetical protein SPA1000 1073062 - 1072292 - | hypothetical protein SPA1001 1074459 - 1073710 - | hypothetical protein TERM 1346 1074129 - 1074153 + g 70 -3 -4.68384 | gap 1, opp_overlap 1074134, overlap 1074135 CTAAAATTAGCGACA TATCAGCACAG TTCC CTGTGTT-ATA TTTTATTGAATCAAT TERM 1347 1074135 - 1074148 + g 70 -6.7 -4.0865 | opp_overlap 1074134, overlap 1074129 TTAGCGACATATCAG CACAG TTCC CTGTG TTATATTTTATTGAA TERM 1348 1074742 - 1074718 - R 87 -10.7 -4.15565 | GTTAGGATGTGAAAA CACAGGGACAG TTA CTGTCACTGCG AAGGCAGCAATAAGG TERM 1349 1075296 - 1075325 + r 81 -5.1 -5.20333 | opp_overlap 1075303, overlap 1075302 GATCAATTGTTGCCG TAAACAGGAATCG TATT CGGTTTCTTTTTA TTTTTCTTATAAATA TERM 1350 1075302 - 1075319 + r 89 -4.1 -5.74684 | opp_overlap 1075303, overlap 1075296 TTGTTGCCGTAAACA GGAATCG TATT CGGTTTC TTTTTATTTTTCTTA SPA1002 1075773 - 1075444 - | putative phage integrase protein SPA1003 1076236 - 1076631 + | hypothetical protein SPA1004 1076759 - 1076607 - | hypothetical protein SPA1005 1078048 - 1076918 - | hypothetical protein TERM 1351 1077008 - 1076986 - G 71 -9.8 -3.61398 | overlap 1076987 CCGCTCTGGCAATAA TGCCGGTAAC AGT GTCACCGGCT GTGGAAAGGGTGATG TERM 1352 1077007 - 1076987 - G 79 -13.3 -2.76696 | overlap 1076986 CGCTCTGGCAATAAT GCCGGTAAC AGT GTCACCGGC TGTGGAAAGGGTGAT TERM 1353 1077637 - 1077625 - G 73 -6.2 -4.3767 | GCAGATGATAATAAA GCGC AGCCA GCGC GGTAAGCATAAGGAT TERM 1354 1077855 - 1077811 - G 90 -4.4 -5.30155 | opp_overlap 1077819, overlap 1077814 1077817 TCAGGAACGAAAAAA CAATAATACTGCCCATAATA TCGTC TATTAAAGGCAGTATTCCAG TCTGTGCACTGATCG TERM 1355 1077852 - 1077814 - G 81 -6.9 -4.72473 | opp_overlap 1077819, overlap 1077811 1077817 GGAACGAAAAAACAA TAATACTGCCCATAATA TCGTC TATTAAAGGCAGTATTC CAGTCTGTGCACTGA TERM 1356 1077849 - 1077817 - G 83 -8.6 -4.42047 | opp_overlap 1077819, overlap 1077814 1077811 ACGAAAAAACAATAA TACTGCCCATAATA TCGTC TATTAAAGGCAGTA TTCCAGTCTGTGCAC TERM 1357 1079999 - 1080023 + G 75 -12.1 -2.90723 | GTAACTTCTACCTGA CCGGTGCGCAG GAG CTGCGTAACGG TGTGGTTAAAGGTCC yjcS 1078444 - 1080423 + | putative hydrolase TERM 1358 1080428 - 1080457 + T 77 -10.7 -3.34192 | opp_overlap 1080425 1080429, overlap 1080429 TTACACCATAAATAG ATTCCCTGCGGCG TCAA TGCTGCAGGGAAG TTACTTCAGACAATT TERM 1359 1080429 - 1080456 + T 83 -14.2 -2.60194 | opp_overlap 1080425 1080429, overlap 1080428 TACACCATAAATAGA TTCCCTGCGGCG TCAA TGCTGCAGGGAA GTTACTTCAGACAAT TERM 1360 1080456 - 1080429 - T 79 -11.3 -3.37299 | opp_overlap 1080429 1080428, overlap 1080425 TACACCATAAATAGA TTCCCTGCGGC GTCAAT GCTGCAGGGAA GTTACTTCAGACAAT SPA1007 1080632 - 1080441 - | hypothetical protein TERM 1361 1080856 - 1080866 + r 71 -6.8 -4.07568 | opp_overlap 1080846, overlap 1080848 GAGAACTGTCCTCGT CAGG AGG CCTG TTTTCAGAAAGGCAA SPA1008 1081446 - 1080832 - | hypothetical protein TERM 1362 1081287 - 1081276 - G 86 -3.6 -5.28942 | GAGGTTAAATAAAAA GCCA AAAC CGGC GATGATGAGGCCAGC SPA1009 1081614 - 1081456 - | hypothetical protein pagO 1082661 - 1081747 - | hypothetical protein TERM 1363 1083401 - 1083458 + r 73 -11.5 -2.59051 | gap 1, opp_overlap 1083372, overlap 1083401 TATGCAAGAACGGGC TGCGGCAAGCTGGCGATCGTTCGATAGT GCG AGTATTGAATGGTTGCCAG-TTGCGGCG GATTTTACTTGTTCA TERM 1364 1083876 - 1083897 + r 89 -4.4 -5.72622 | overlap 1083869 1083867 1083878 TCTTGTCCGAAATTT GTCCGAAT TTCTGT ATTCGGTC TTTTTTCTTTATACC TERM 1365 1083878 - 1083895 + r 72 -5.6 -4.49311 | overlap 1083869 1083867 1083876 TTGTCCGAAATTTGT CCGAAT TTCTGT ATTCGG TCTTTTTTCTTTATA SPA1011 1084318 - 1083950 - | putative cytoplasmic protein TERM 1366 1084911 - 1084901 - R 79 -8.2 -4.24204 | CACTGAGAGGCAAAA CCGG CAA CCGG ATGCGCTGTACCCCA TERM 1367 1085578 - 1085594 + r 76 -5.1 -4.78839 | CCGATCCAGAACTGG CGGCT GGCGATG AGCCG TTTTATTATCGAGTT TERM 1368 1085611 - 1085632 + r 79 -10.1 -3.76224 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATAACTGGGCA SPA1013 1085923 - 1085783 - | hypothetical protein SPA1014 1086358 - 1086089 - | hypothetical protein SPA1015 1086729 - 1087148 + | putative acetyltransferase SPA1016 1088000 - 1087524 - | hypothetical protein TERM 1369 1088002 - 1088013 + r 79 -4.4 -5.15969 | TCATCCTTGCTCATA CATC TCCA GATG TTTTTTCGATTACGC TERM 1370 1088159 - 1088175 + r 74 -10.9 -2.80074 | opp_overlap 1088157, overlap 1088155 GCTTTGAAAATCATT TCTCCTG CAC CAGGAGA TGCTGTTGTCGAGCA SPA1017 1088723 - 1088316 - | hypothetical protein TERM 1371 1088374 - 1088392 + g 86 -3.8 -5.41359 | opp_overlap 1088365, overlap 1088365 1088364 1088375 AATAATTGGTTGTCT TTCGACCA GTA TTGTCGAG TTTTTTGGTTTAATT TERM 1372 1088991 - 1088976 - H 85 -6.2 -5.12474 | opp_overlap 1088976 CATAATATATAAAAA TCAGTT AATT AACTGA TGTCTCGACAATGAT TERM 1373 1089067 - 1089055 - H 78 -6.2 -4.57837 | ATAGGTTTTGAAAAA GCGG CTAAC CCGC AGGCAGGATAATTGA sopE2 1089406 - 1090128 + | Type III-secreted protein effector: invasion-associated protein TERM 1374 1090174 - 1090146 - f 75 -9.8 -3.52021 | opp_overlap 1090145 1090146, overlap 1090144 1090172 ATAGTAAATACAATA CTGCTATTAACT ATATG AATTAATAGCAG ATTTTCTGAAACTAT TERM 1375 1090201 - 1090232 + F 80 -6.6 -4.75288 | overlap 1090203 CTATATATTCATTTT TATGGCGACGCTTT TAAC AAAACGTCGTCATC TTTATTTTAATATAA TERM 1376 1090203 - 1090230 + F 77 -9.2 -3.98052 | overlap 1090201 ATATATTCATTTTTA TGGCGACGCTTT TAAC AAAACGTCGTCA TCTTTATTTTAATAT SPA1019 1090413 - 1090577 + | hypothetical protein TERM 1377 1090613 - 1090662 + F 100 -19.4 -4.66318 | opp_overlap 1090603 1090640, overlap 1090615 1090618 GAACAGGCGATAGTG AGTAGCTCGCTGCGCCAGGGGA TAACAC TCCCCTGGCGCAGCCAGTTATA TTTTATTGCGATAAT TERM 1378 1090615 - 1090660 + F 100 -24.2 -3.94438 | opp_overlap 1090603 1090640, overlap 1090613 1090618 ACAGGCGATAGTGAG TAGCTCGCTGCGCCAGGGGA TAACAC TCCCCTGGCGCAGCCAGTTA TATTTTATTGCGATA TERM 1379 1090618 - 1090657 + F 100 -23.7 -4.0865 | opp_overlap 1090603 1090640, overlap 1090615 1090613 GGCGATAGTGAGTAG CTCGCTGCGCCAGGGGA TAACAC TCCCCTGGCGCAGCCAG TTATATTTTATTGCG TERM 1380 1091137 - 1091152 + G 76 -3.2 -5.06735 | overlap 1091133 ACCGCTGAACACGCT GCGC AAGCTGAA GCGC TTTTTATCCTTTGTC pphA 1090804 - 1091451 + | serine/threonine protein phosphatase 1 yebW 1091661 - 1091470 - | putative secreted protein TERM 1381 1091763 - 1091742 - R 78 -6.5 -4.55759 | opp_overlap 1091742 1091745, overlap 1091745 AAAAGGAAGAATAAA TAACCCGCC TGGC GACGGGTTC TTTTTGAGTCAGGCA TERM 1382 1091745 - 1091760 + r 72 -6 -4.44608 | opp_overlap 1091745 1091742, overlap 1091742 AGGAAGAATAAATAA CCCGCC TGGC GACGGG TTCTTTTTGAGTCAG TERM 1383 1091760 - 1091745 - R 79 -8.2 -4.34486 | opp_overlap 1091742 1091745, overlap 1091742 AGGAAGAATAAATAA CCCGCC TGGC GACGGG TTCTTTTTGAGTCAG SPA1022 1092011 - 1091772 - | hypothetical protein TERM 1384 1091912 - 1091902 - G 70 -6.8 -4.128 | opp_overlap 1091902, overlap 1091898 AGTTGCATACATAAA TCCG GAT CGGA TTTACAGGGGATAGT TERM 1385 1091994 - 1091983 - G 74 -7.2 -4.13767 | opp_overlap 1091986 TCGTCGATTTCAAAA GCGC CAAT GCGC ACACTGGTTTTCATC yebU 1093564 - 1092125 - | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 1386 1092440 - 1092429 - G 75 -5.8 -4.58395 | overlap 1092431 1092433 CCGAGCCGGGAAAAA CGGA CTTT TCCG ATCAGTGATTCAATC TERM 1387 1092919 - 1092929 + g 86 -6.8 -5.02074 | TATCCAGATTGCTTT CTGG CGA CCAG TTTTTTAGCGCATCA TERM 1388 1093635 - 1093610 - R 100 -12.5 -4.46926 | opp_overlap 1093607 1093610 1093626, overlap 1093591 1093611 CAGTGTAGCATAAAA CGCTCCGGCGC GAGT ACGCCGGAGCC TGGTGTTTAACGTGG TERM 1389 1093610 - 1093635 + r 77 -11.8 -2.85297 | opp_overlap 1093591 1093610 1093611, overlap 1093607 1093626 CAGTGTAGCATAAAA CGCTCCGGCG CGAGTA CGCCGGAGCC TGGTGTTTAACGTGG TERM 1390 1093634 - 1093611 - R 100 -16 -3.27674 | opp_overlap 1093610 1093607 1093626, overlap 1093591 1093610 AGTGTAGCATAAAAC GCTCCGGCGC GAGT ACGCCGGAGC CTGGTGTTTAACGTG SPA1024 1096281 - 1093642 - | hypothetical protein TERM 1391 1094815 - 1094785 - GR 74 -11.1 -2.79796 | overlap 1094787 TTCCAGGTTAGCATA GAGCGGGTAGGTG GATTT CATCTTCCCGCTC GTACCGGGTAAAATA TERM 1392 1095959 - 1095901 - GR 71 -9.5 -3.14211 | opp_overlap 1095901 1095905, overlap 1095918 1095955 1095956 ATTCCCGCCGACCAA CGC-ATCCAGGCCGGAAACGCCCGCCAGC GAG GCTTT-GGGCGTCACCAGCCAGAATTGCG TCTCTTCGCGCAACG yebS 1097527 - 1096244 - | hypothetical protein TERM 1393 1096592 - 1096579 - GH 75 -3.7 -4.83615 | opp_overlap 1096582, overlap 1096582 TACTGGCGATAAAAA CGACG GCGG CGACG GCGATATTGCTGCTG TERM 1394 1097156 - 1097131 - GH 78 -2.5 -5.1848 | gap 1, overlap 1097137 AAGCAATTGAAAAAA CGAGAATAAGCG GCG CGCCCAT-CACG CAAAAGAGCACCATT yebR 1097569 - 1098153 + | hypothetical protein TERM 1395 1098181 - 1098200 + F 81 -12.2 -3.15996 | overlap 1098179 GTAGCAATTACTGAT GGCGTCAT TATA ATGACGCC TGTTCATGCCTGCTG TERM 1396 1098682 - 1098640 - f 86 -9 -4.40561 | overlap 1098637 GCTGGCGAAAAAGAA GACGCGCCGCGACGCGAG CGTAAAC CTCGCCCGGTAGCGCGTC GTAAAGAAGGCGCTG TERM 1397 1098736 - 1098769 + F 71 -7.3 -4.1043 | gap 1, opp_overlap 1098725 1098722 1098734 1098733, overlap 1098736 CCGACGACGAAAGCG CCG-CGTGCGCCTCGC GAA GAGAAGCACACGCCGG TTTCTGATATTTCAG TERM 1398 1098981 - 1099006 + G 83 -14.8 -2.72344 | GGCTTACCGCGTTAG CTGGCCTGCT TGCATT AGCAGGCCAG TCCTTCGCCGTGGAA TERM 1399 1099301 - 1099318 + G 74 -10.5 -3.60792 | opp_overlap 1099300 1099301 TACGATCTTTATAAC CTGGCGC AAAA GCGCCGG TTTGAACGTTACCAG TERM 1400 1100819 - 1100807 - g 73 -9.1 -3.91564 | opp_overlap 1100814 GAGAACAATGAAGAA GACGC TCT GCGTC TGGCGCGTATTAACG TERM 1401 1100981 - 1100969 - g 93 -4.7 -5.61881 | CTTGAAAAAGAAAAA CCAGC GGA GCAGG CGGCAGCCGATAAGT prc 1098950 - 1100998 + | carboxy-terminal protease TERM 1402 1101006 - 1101027 + F 100 -13.1 -6.06723 | opp_overlap 1101006 1101020 ATAAGTAACGCTAAA CAGGCACAA AAAA TTGTGCCTG TTTTTTTTTAACAAG TERM 1403 1101027 - 1101006 - f 95 -13.1 -3.69836 | opp_overlap 1101006, overlap 1101020 ATAAGTAACGCTAAA CAGGCACAA AAAA TTGTGCCTG TTTTTTTTTAACAAG TERM 1404 1101642 - 1101613 - g 70 -8.7 -3.73224 | gap 1, opp_overlap 1101622 TCATTGCGCATGAAA TCAGCCATATTGCC AAT GGCGATATGG-TGA CGATGACGTTGATTC htpX 1101192 - 1102073 + | heat shock protein HtpX TERM 1405 1102124 - 1102089 - T 86 -13.4 -3.36803 | opp_overlap 1102098, overlap 1102098 TAAGCCCACTGACAA GTATGAAAAGCGCGTC GAAT GACGCGCTTTTTTTAC GCCTGAACGCGTGGT TERM 1406 1102115 - 1102098 - T 100 -12.7 -4.37527 | opp_overlap 1102098, overlap 1102089 TGACAAGTATGAAAA GCGCGTC GAAT GACGCGC TTTTTTTACGCCTGA TERM 1407 1102098 - 1102115 + T 100 -12.7 -5.42259 | opp_overlap 1102089 1102098 TGACAAGTATGAAAA GCGCGTC GAAT GACGCGC TTTTTTTACGCCTGA SPA1030 1103494 - 1102121 - | putative transport protein TERM 1408 1103037 - 1103008 - G 73 -6.4 -4.45485 | gap 2, overlap 1103009 ATGAGATGGACAAAA TCGCCGCGGCGATC GTCG GA-C-CCGCGGCGG AAGAGACTGCGACGA TERM 1409 1103466 - 1103484 + g 74 -2.2 -5.09895 | overlap 1103465 1103468 TATCTCTGCGGGAGG GGCAGGCC ATC GGCCCGTG TTTTTTCCATAAGTA TERM 1410 1103468 - 1103482 + g 70 -7 -4.17608 | overlap 1103465 1103466 TCTCTGCGGGAGGGG CAGGCC ATC GGCCCG TGTTTTTTCCATAAG kdgR 1103670 - 1104461 + | transcriptional regulator KdgR TERM 1411 1104514 - 1104492 - T 89 -4.8 -5.78622 | opp_overlap 1104492 TGACGTTAAAAAAAA GCAGCTGC GAAAAAT GTAGCTGC TTTTTTTATAACATC TERM 1412 1104492 - 1104514 + T 100 -7.7 -5.626 | opp_overlap 1104492 TGACGTTAAAAAAAA GCAGCTGCG AAAAA TGTAGCTGC TTTTTTTATAACATC SPA1032 1104912 - 1104673 - | hypothetical protein yobG 1105070 - 1105213 + | hypothetical protein TERM 1413 1105510 - 1105500 - g 71 -4.6 -4.58563 | GAACCAGAAAAAGAA GCGG AAC CCAC AACAGCGGCAAGCGA SPA1034 1105284 - 1105571 + | hypothetical protein yobF 1106220 - 1106363 + | hypothetical protein TERM 1414 1106521 - 1106503 - g 70 -6.7 -4.09739 | overlap 1106504 GCAATGGTTTCAAAA CTCTGGC TGAAG GCCAGAA CGTTGAGTTCGAAAT cspC 1106376 - 1106585 + | cold shock-like protein CspC TERM 1415 1106562 - 1106578 + F 70 -9.5 -2.94099 | overlap 1106542 CAGAAAGGTCCGGCT GCTGTTA ACG TAACAGC TATCTGATCGACACC TERM 1416 1106652 - 1106634 - f 87 -10.2 -4.128 | opp_overlap 1106634 AGCCTCAGATATAAA GCCTCGCT AAA AGCGGGGC TTTTTAATTCAATAT TERM 1417 1106634 - 1106652 + F 100 -12.4 -4.89009 | opp_overlap 1106634 AGCCTCAGATATAAA GCCTCGCT AAA AGCGGGGC TTTTTAATTCAATAT TERM 1418 1106719 - 1106735 + F 85 -3.7 -5.47914 | TTTGTTGCAAAGGCG CGATGTT ATT AGCATTG TTTTTTCTGGTTTTT TERM 1419 1106870 - 1106891 + G 71 -7.3 -3.9461 | TGCACTACTTTGCAC TGCCATTCT GCTC AGTATGGCA TTGTTGTTAGGGGGG TERM 1420 1107130 - 1107107 - g 79 -13.2 -2.82623 | gap 1, opp_overlap 1107116, overlap 1107104 CGTTGGCTACAATGA GCGCTGG-CAG GCG CTGGCCAGCGC CTTACATCTGTCTCT TERM 1421 1107116 - 1107131 + G 71 -10.4 -3.18511 | opp_overlap 1107107 1107104 CAATGAGCGCTGGCA GGCGCT GGCC AGCGCC TTACATCTGTCTCTC ftsI 1106805 - 1108550 + | penicillin-binding protein rrmA 1108616 - 1109425 + | 23S rRNA methyltransferase A TERM 1422 1109435 - 1109458 + T 70 -10.4 -2.5655 | gap 1, opp_overlap 1109435 1109436, overlap 1109434 CGTTAACCGTGAAAA T-GCGTCCAGA GGA TCTGGACGCCA ATTCCTATCAGTACG TERM 1423 1109457 - 1109435 - T 95 -12 -4.14392 | opp_overlap 1109434 1109435, overlap 1109436 CGTTAACCGTGAAAA TGCGTCCAGA GGA TCTGGACGCC AATTCCTATCAGTAC TERM 1424 1109456 - 1109436 - T 93 -15.5 -3.08314 | opp_overlap 1109435 1109434, overlap 1109435 GTTAACCGTGAAAAT GCGTCCAGA GGA TCTGGACGC CAATTCCTATCAGTA yebN 1110042 - 1109422 - | hypothetical protein TERM 1425 1110255 - 1110281 + r 79 -8.2 -4.258 | AAATATTATTTGCCT TCTAATTGAAAA CGA TTTTCATTTAGA TTTATTCATCAATAA TERM 1426 1110347 - 1110332 - R 78 -6.2 -4.66537 | opp_overlap 1110332 TTGGTCAATAGAAAA TATAGC CTTA GCTATA TTATGATTCGAAATA SPA1040 1110856 - 1110398 - | hypothetical protein TERM 1427 1110879 - 1110898 + r 71 -10.6 -2.62184 | opp_overlap 1110880 CCAGAGAAATAAAAA ACGGGGCC GTTT GGCCCCGG TAGTGTACAACAGCC TERM 1428 1110897 - 1110880 - R 100 -14.1 -5.76237 | opp_overlap 1110879 CAGAGAAATAAAAAA CGGGGCC GTTT GGCCCCG GTAGTGTACAACAGC manZ 1111774 - 1110914 - | mannose-specific PTS system protein IID TERM 1429 1111343 - 1111319 - G 72 -4.1 -4.81734 | overlap 1111333 AAACAGGATGAAAAA CAGCAGCGGAC CAA GCAGGCTGCCG CTCATCGCAATACCT TERM 1430 1111719 - 1111729 + g 79 -3.2 -5.28778 | overlap 1111716 ACGCCGCGAATATCG CTCG GAG TGAG TTTTTTCTCGGTGGT manY 1112578 - 1111778 - | phosphotransferase enzyme II, C component manX 1113599 - 1112631 - | PTS system, mannose-specific IIAB component TERM 1431 1112714 - 1112724 + g 78 -6.8 -4.59853 | overlap 1112702 1112723 CAAGCTCGATGCCGC GCTC GTT GAGC TTTTTAAAGGCTTCG TERM 1432 1113163 - 1113191 + g 100 -9.4 -4.86033 | overlap 1113165 GGTGCGGCCGCTTTT GGCGCGGCGGCG ACTGG CGCTGGCGCGGC TTTTTCTACCGGTTT SPA1044 1113752 - 1114084 + | putative cytoplasmic protein yoaE 1114072 - 1115631 + | hypothetical protein SPA1046 1117356 - 1115653 - | hypothetical protein TERM 1433 1115681 - 1115733 + g 81 -12.5 -3.09635 | opp_overlap 1115660 1115680, overlap 1115670 ATCGCGGACATAATC TGTCCGTTATGCCGGGCGGGCGGCG GCG CGCTGCCCGCCAGCCACTGTGGAAA TTCGCTAATGGGCAT TERM 1434 1116596 - 1116621 + g 89 -2.7 -5.63103 | gap 1 AAAGGGAAATGTCGC GATGAA-AGC TGGTAAC GCTCTTCATC TTTTTTTAATTCCGG TERM 1435 1117375 - 1117347 - G 100 -13.9 -5.10968 | overlap 1117348 AGGAAGAGATAAAAA TTTCGCCCATCCG TAG CAGATGGGCGAAG GGAGGGGAAACGGCG TERM 1436 1117374 - 1117348 - G 100 -17.4 -3.64954 | overlap 1117347 GGAAGAGATAAAAAT TTCGCCCATCCG TAG CAGATGGGCGAA GGGAGGGGAAACGGC sdaA 1118738 - 1117392 - | L-serine deaminase 1 TERM 1437 1117892 - 1117932 + g 74 -9.6 -3.76048 | gap 1, overlap 1117876 GCACGATGCCGCACG CGCCGTTGGTTGGCGCCGT CACG ACG-CGACCACCTGCGGCG TTCTCTTCGTTCACC TERM 1438 1118527 - 1118503 - G 89 -9.3 -4.63486 | overlap 1118522 ACGTCGCGAATAAAA CCGGGGATACT ATC AATATCCACGG TAGCGGGTTCATTAC yeaB 1119598 - 1119020 - | hypothetical protein TERM 1439 1119400 - 1119425 + g 70 -9.7 -3.35046 | gap 1, overlap 1119398 TACTATCCACGGCCC CGCCGGGAAAGG CGA CCTGT-CCGGCG TGTTTGCGCAAATGA pabB 1120966 - 1119602 - | para-aminobenzoate synthase component I yoaH 1121047 - 1121226 + | hypothetical protein yoaB 1121576 - 1121232 - | hypothetical protein TERM 1440 1122284 - 1122305 + G 74 -2.3 -5.07486 | gap 1, overlap 1122285 GCGATGGACGCGGAT G-TGGTGATT GTA AACCACCATC TTTTTCTTGCGGATA yoaA 1121708 - 1123618 + | putative ATP-dependent helicase yeaZ 1123676 - 1124371 + | hypothetical protein slp 1124443 - 1125024 + | putative lipoprotein TERM 1441 1125046 - 1125070 + F 86 -14.4 -2.56596 | opp_overlap 1125046 1125050, overlap 1125050 GTTTTATCAATAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCATAGAGAC TERM 1442 1125070 - 1125046 - f 100 -14.4 -4.71426 | opp_overlap 1125046 1125050, overlap 1125050 GTTTTATCAATAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCATAGAGAC TERM 1443 1125050 - 1125066 + F 77 -9.4 -3.98826 | opp_overlap 1125050 1125046, overlap 1125046 TATCAATAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCATAG TERM 1444 1125066 - 1125050 - f 93 -9.4 -4.90302 | opp_overlap 1125046 1125050, overlap 1125046 TATCAATAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCATAG fadD 1125229 - 1126914 + | long-chain-fatty-acid--CoA ligase TERM 1445 1126938 - 1126954 + F 100 -11.5 -5.75342 | opp_overlap 1126938 TCAGCTAACGAGAGA CGCCGGT TAA GCCGGCG TTTTTTTTGGCGCGA TERM 1446 1126954 - 1126938 - f 73 -10.8 -3.0127 | opp_overlap 1126938 TCAGCTAACGAGAGA CGCCGG TTAAG CCGGCG TTTTTTTTGGCGCGA rnd 1126999 - 1128114 + | ribonuclease D TERM 1447 1128209 - 1128180 - T 100 -15.3 -5.57054 | opp_overlap 1128187, overlap 1128187 AATAATGTAAAAAAA TAAAAAAGGCAGA TTCT TCTGCCTTTTTTA ATCCAGGAATTTTCC TERM 1448 1128202 - 1128187 - T 100 -9 -6.12458 | opp_overlap 1128187, overlap 1128180 TAAAAAAATAAAAAA GGCAGA TTCT TCTGCC TTTTTTAATCCAGGA TERM 1449 1128187 - 1128202 + T 100 -9 -5.14563 | opp_overlap 1128187 1128180 TAAAAAAATAAAAAA GGCAGA TTCT TCTGCC TTTTTTAATCCAGGA minE 1128502 - 1128236 - | cell division topological specificity factor MinE TERM 1450 1128281 - 1128298 + g 76 -5.5 -4.72986 | opp_overlap 1128283 TACGTTAAGTTCAAG GATGGAG ATAT CACCATC TTTTTGCTCAAGCTG minD 1129318 - 1128506 - | cell division inhibitor MinD TERM 1451 1128987 - 1128967 - G 74 -10.5 -3.57144 | opp_overlap 1128966 1128967 CCGGCGAGTCGCAAA CGATGAACT CAA AGTCCATCG CTTTCAGTGAGTCCA TERM 1452 1129021 - 1129034 + g 71 -9.5 -3.5241 | overlap 1129022 CCTTAGCGACGCCTT CGCGC GTTA GCGCG TCTTTATCCCGGGTC minC 1130049 - 1129342 - | septum formation inhibitor TERM 1453 1129940 - 1129927 - G 87 -8.1 -4.56597 | opp_overlap 1129926 1129924 1129927 GGCGTGTTTTAAAAA CGCAG GAGC CTGCG CTATTTTGTCTTCTA ycgL 1130136 - 1130468 + | hypothetical protein TERM 1454 1130867 - 1130856 - g 77 -3.6 -5.10154 | AGGGAAAATGAAAAA GGCC GGAC AGCC CTGGGAAAAAGCCAA ycgM 1130518 - 1131177 + | hypothetical protein ycgN 1131270 - 1131716 + | hypothetical protein SPA1063 1132068 - 1132205 + | hypothetical protein TERM 1455 1132238 - 1132254 + F 100 -10.1 -5.54264 | opp_overlap 1132226 CAACCGCCTGATGCA CCGTCTG TGC CAGGCGG TTTTTTTGCATCTTT SPA1064 1132398 - 1132571 + | hypothetical protein SPA1065 1132984 - 1132643 - | hypothetical protein TERM 1456 1133086 - 1133071 - R 100 -10.4 -5.75342 | opp_overlap 1133071 TTCGGGCAAAAAAAA CGCTCC CGAA GGAGCG TGTGTATCAACGACC TERM 1457 1133071 - 1133086 + r 73 -10.4 -2.98823 | opp_overlap 1133071 TTCGGGCAAAAAAAA CGCTCC CGAA GGAGCG TGTGTATCAACGACC dsbB 1133623 - 1133093 - | disulfide bond formation protein B nhaB 1135309 - 1133765 - | sodium/proton antiporter TERM 1458 1134979 - 1134968 - G 72 -2.2 -4.86385 | overlap 1134970 ACGGGTAAAAATAAA CAGC AATA ACTG CTTCATAAAGTAGAT TERM 1459 1135293 - 1135274 - G 89 -9.2 -4.57569 | CGACTGGCCTAAAAA GTTGCGCC ACAT GGCGCGAC CCCATGAGATCTCCA fadR 1135529 - 1136248 + | fatty acid metabolism regulator ycgB 1137827 - 1136295 - | hypothetical protein TERM 1460 1137060 - 1137078 + g 75 -3.7 -4.87665 | AATTTCGCGCTGCCA CGGCTCG AGCAA CGGGGCG TTTTTCTCCATAAAA TERM 1461 1137913 - 1137903 - H 72 -3.2 -5.06451 | CACCATGTTAAAAAA CGAC TTG ATCG TGAAAACTTTTCTTT TERM 1462 1138358 - 1138348 - g 70 -5.4 -4.42788 | CTGAAGGCGATAAAA TGGA TGT TCCA GCGCCATGCGCCGCT dadA 1138150 - 1139448 + | D-amino acid dehydrogenase small subunit dadX 1139462 - 1140532 + | alanine racemase TERM 1463 1140550 - 1140581 + T 71 -10.1 -3.29043 | overlap 1140574 TAATGCAGGCTAAGG CGTCGACTGGTCC ACCTGG GGGCGGGTCGACG TTGTCAGGCGACCTT ycgO 1142328 - 1140595 - | potassium/proton antiporter TERM 1464 1141313 - 1141290 - G 76 -9.6 -3.81022 | gap 1 AAACGGCGAGAATAA TCGGCACCGCG CCG CGCAGT-CCGA CCCAACTGATGAAAA ldcA 1143339 - 1142425 - | L,D-carboxypeptidase A TERM 1465 1143216 - 1143206 - G 70 -6.8 -4.11216 | TCCGTACCGGCAAAA CGCT GAT AGCG GCGACGAATCACCTC TERM 1466 1143274 - 1143288 + g 75 -12.8 -2.55896 | opp_overlap 1143228, overlap 1143273 1143271 AGTCAGGCGCTGAAC GCCGCG TAA CGCGGC CTGTTGGTTAATACA TERM 1467 1143655 - 1143645 - g 90 -8.2 -4.68593 | CCCATCAGTGAAAAA GCCG GGG CGGC ATGGGGGGTTGATCC mltE 1143510 - 1144121 + | membrane-bound lytic murein transglycosylase E TERM 1468 1144202 - 1144259 + F 74 -10.7 -3.14257 | gap 3 ATAATCCGCTGCAAC TC-CCGCTCCACCGCC-GGGCTAACGTT AAGGA AACGAAAGCTCAGGCGG-GGAGTGGTGA TCGTTTCATTTTTCC ymgE 1145037 - 1145291 + | hypothetical protein TERM 1469 1145363 - 1145376 + T 78 -5.9 -4.8543 | CACGCGTTACTGCGT CGCTG CAGA CGGCG TTTTTGTCGGCGTTG treA 1147066 - 1145354 - | trehalase TERM 1470 1145971 - 1146006 + g 75 -6.6 -4.3898 | gap 1 ATTGCGAGGCTTTGG CCCGATCGCCCGCC-GC AGC GCTGGCGCGCGCGAGGG TTTTCTCCAGCTGAT TERM 1471 1147256 - 1147239 - R 95 -7.7 -5.4492 | opp_overlap 1147239 TATACAGACAAAAAA TCCACGC CGGG ACGTGGA TTTTAGCGCAATGAC TERM 1472 1147239 - 1147256 + r 71 -7 -4.08767 | opp_overlap 1147239 TATACAGACAAAAAA TCCACG CCGGGA CGTGGA TTTTAGCGCAATGAC SPA1078 1148605 - 1147280 - | glutamate dehydrogenase-like protein TERM 1473 1148942 - 1148911 - R 89 -6.5 -5.36364 | opp_overlap 1148914, overlap 1148914 GTAAAAAGATAAAAA TAACCGGAGTCAG ACGGCG CTGGCCCCGGTTT ACCTCTTTATTGTTG TERM 1474 1148914 - 1148939 + r 74 -8.2 -3.84931 | opp_overlap 1148911 1148914 AAAAGATAAAAATAA CCGGAGTCAG ACGGCG CTGGCCCCGG TTTACCTCTTTATTG TERM 1475 1148939 - 1148914 - R 84 -8.2 -4.69512 | opp_overlap 1148914, overlap 1148911 AAAAGATAAAAATAA CCGGAGTCAG ACGGCG CTGGCCCCGG TTTACCTCTTTATTG SPA1079 1149038 - 1148949 - | putative periplasmic protein appB 1150187 - 1149051 - | cytochrome oxidase subunit II appC 1151743 - 1150199 - | third cytochrome oxidase, subunit I TERM 1476 1151111 - 1151087 - G 100 -14.3 -3.83998 | TGAGCCGATAGCAAA CGAGCGCAAGG CCA CCTCACGCTCG CGGCCACGTAGCAGA hyaF 1152666 - 1151818 - | hydrogenase-1 operon protein HyaF hyaE 1153067 - 1152663 - | hydrogenase-1 operon protein HyaE TERM 1477 1152808 - 1152779 - G 71 -4.3 -4.56597 | gap 1, opp_overlap 1152786, overlap 1152780 1152783 1152784 CGCCGTCTGTAAAAA CCAACGT-CGCCGG AAA CCGACGTACATTAA AGCGATCGCCGATAG hyaD 1153653 - 1153057 - | hydrogenase 1 maturation protease hyaC 1154381 - 1153650 - | hydrogenase 1 b-type cytochrome subunit hyaB 1156193 - 1154400 - | hydrogenase 1 large subunit TERM 1478 1154741 - 1154757 + g 83 -7.9 -4.67904 | ATTTCTCGGTATTGG CGGTGGC CAG GTCGCCG TTTTTCAGGTTGGTC TERM 1479 1155123 - 1155100 - G 74 -7.4 -4.09739 | gap 1 GTAATGCCGTCAAAA GGATGA-CGGC CCA GCCGATCGTCC GGATAGCGGTACCAG TERM 1480 1159012 - 1159023 + G 77 -4.4 -4.93296 | opp_overlap 1159012 TGAGACGCCGCTAAA GGAT CAGC ATCC TTTTTATAATCATAC SPA1088 1157792 - 1159057 + | hypothetical protein TERM 1481 1159131 - 1159158 + T 74 -11.4 -2.80991 | opp_overlap 1159136, overlap 1159136 AGATATTATGAAATA AAAAATCCACGC GGCT GCGTGGATTTTA TGAGTTTCTTTGCCT TERM 1482 1159136 - 1159153 + T 95 -11.3 -4.53707 | opp_overlap 1159136, overlap 1159131 TTATGAAATAAAAAA TCCACGC GGCT GCGTGGA TTTTATGAGTTTCTT TERM 1483 1159153 - 1159136 - T 100 -11.3 -5.68438 | opp_overlap 1159136 1159131 TTATGAAATAAAAAA TCCACGC GGCT GCGTGGA TTTTATGAGTTTCTT ychF 1160307 - 1159216 - | translation-associated GTPase TERM 1484 1160419 - 1160392 - R 70 -9.8 -2.94099 | opp_overlap 1160391 1160390 TTCGCCTATTATACA CGGCGTGCGGCA AAAA TGCCGCACATCA CTGGTTATTGCGCCT pth 1161032 - 1160424 - | peptidyl-tRNA hydrolase TERM 1485 1161151 - 1161179 + H 77 -9.1 -3.96148 | overlap 1161175 GTTCAGAGTGTTATT TGTAAAGTTTTGT TAA ATGAAACTTTACA TTTGTGATCGCACCC ychH 1161284 - 1161562 + | hypothetical protein ychM 1163292 - 1161607 - | putative sulfate transporter YchM TERM 1486 1162462 - 1162448 - G 71 -7.8 -3.92075 | ATTGCCATCGAGAAA GCCGCT GGC AGCAGC GCGCGCAGTGAATCC TERM 1487 1163398 - 1163385 - R 100 -9.5 -5.76633 | opp_overlap 1163385 TTACAGACAAAAAAA CCCGC CGCA GCGGG TTTCAGATCCGGGTT TERM 1488 1163385 - 1163398 + r 75 -9.5 -3.60475 | opp_overlap 1163385 TTACAGACAAAAAAA CCCGC CGCA GCGGG TTTCAGATCCGGGTT prsA 1164364 - 1163417 - | ribose-phosphate pyrophosphokinase TERM 1489 1164495 - 1164481 - R 75 -10 -3.62522 | CAACGTCTGGAACAA GGTGAC GTT GTCACC GAAGCTCAGCTTGCC ipk 1165478 - 1164630 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 1490 1165093 - 1165050 - G 71 -6.1 -4.24342 | gap 3, opp_overlap 1165052, overlap 1165052 GTGGCCACGAACAAA GACCGG-GACG-TCGGCGCCGA GCG TCAG-GCCGAGCGTCGCCAGTT CATCAATGGAAAGCC TERM 1491 1165091 - 1165052 - G 70 -8.7 -3.72374 | gap 3, opp_overlap 1165052, overlap 1165050 GGCCACGAACAAAGA CCGG-GACG-TCGGCGCCGA GCG TCAG-GCCGAGCGTCGCCAG TTCATCAATGGAAAG lolB 1166101 - 1165478 - | outer membrane lipoprotein LolB hemA 1166415 - 1167671 + | glutamyl-tRNA reductase TERM 1492 1168548 - 1168513 - g 82 -5.2 -4.98911 | overlap 1168519 CAGCATAAAAACAAA GCGAAAGCGCTCTCGG TGCT CGGGGCGCGCATTCAC GCCGCCGAAACGGCA TERM 1493 1168609 - 1168567 - g 93 -12 -4.24002 | gap 1, opp_overlap 1168575, overlap 1168519 1168560 1168559 1168568 GCCGAAACGGCAAAA CGCCA-GCAGGCCGAGGCG TCAACG CGCCGCAACCTGCTTGGCA GCGGCGATCGCAGCG TERM 1494 1168608 - 1168568 - g 84 -13.3 -3.13919 | gap 1, opp_overlap 1168575, overlap 1168519 1168560 1168559 1168567 CCGAAACGGCAAAAC GCCA-GCAGGCCGAGGCG TCAACG CGCCGCAACCTGCTTGGC AGCGGCGATCGCAGC prfA 1167712 - 1168794 + | peptide chain release factor 1 hemK 1168794 - 1169627 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 1495 1169915 - 1169931 + G 73 -5.8 -4.51196 | gap 1 GATTATCGTCAGGCG CGCAGCC AGCA GGC-GCG TTTTATCGCTTTCCC sirC 1169624 - 1170013 + | putative transcriptional regulator TERM 1496 1170308 - 1170296 - g 74 -2.6 -5.03747 | AAAGTCCTGAAAAAA CGCC AGGGG AGCG CGGTATCGTTGGGCG ychA 1170017 - 1170826 + | putative transcriptional regulator TERM 1497 1170995 - 1171011 + G 73 -10.9 -3.406 | GCACTACGTAACCGT TACCCAG AAG CTGGGTA TTCCTTACGTGTTCA TERM 1498 1171432 - 1171452 + G 77 -8.2 -4.14392 | opp_overlap 1171431 1171432, overlap 1171435 GCGTGATGAAAAAGG TCTCCGGC AACTC GCCGGTGA TTTTCGACGTTACCC kdsA 1170864 - 1171718 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1499 1171741 - 1171762 + T 100 -10.2 -5.36441 | TTTTAGCTTGTGTAG GCCGGATA AGATAC TATCCGGC TTTTTTATATCAGGC chaA 1172872 - 1171772 - | calcium/sodium:proton antiporter TERM 1500 1172341 - 1172321 - G 81 -3.9 -5.1963 | overlap 1172323 TTGAATCAACAAAAA TACGCCG TACATCG CGGCGGA AATTAACGCGACCAA TERM 1501 1172339 - 1172323 - G 70 -6.5 -4.21997 | overlap 1172321 GAATCAACAAAAATA CGCCG TACATCG CGGCG GAAATTAACGCGACC TERM 1502 1172667 - 1172650 - G 70 -6.9 -4.18908 | overlap 1172632 1172629 ACAGGCTTAAAATAA GCGATCC GTAG GGTTCGC CGAGTCGGTGCGCTA ychN 1173802 - 1173449 - | hypothetical protein ychP 1173979 - 1175403 + | hypothetical protein narL 1176054 - 1175404 - | transcriptional regulator NarL narX 1177843 - 1176047 - | nitrate/nitrite sensor protein NarX TERM 1503 1177251 - 1177206 - G 70 -9.7 -3.33492 | TTATTGAGCGCAGAA CCCAACGCGGCCATCTCATTG CGTC CACTGATATTGGCACGTTGGG TAAAGTCGCGCTGAC TERM 1504 1178685 - 1178669 - g 72 -2.1 -4.86731 | overlap 1178647 1178670 CTTTCCTAAACAAAA GCAGGGC GGC GCGCTGG GTCTGAACGGTGGTC TERM 1505 1179040 - 1179065 + G 70 -3.3 -4.69027 | gap 1, overlap 1179046 CTAAAACGCAATTCC CGGATG-TGCAG ATC CTGCATTATGCG TTTTTCGGTCCGTTT TERM 1506 1179423 - 1179437 + G 89 -2.7 -5.4505 | overlap 1179415 TTTATTTCCGCGATT GGCGC GATTG GCGGC TTTTTTATTCCGAAA narK 1178184 - 1179581 + | nitrite extrusion protein (nitrite facilitator) TERM 1507 1179598 - 1179616 + F 100 -13.1 -6.32216 | TTTTGATTATCCTTT GCGCGGC GTTAG GCCGCGC TTTTTTTTTATCTGT TERM 1508 1179828 - 1179806 - f 89 -9.2 -4.66625 | AGATATACAAATAAA CACACTCCTC CTA AAGGAGTATG CAGAAGGTTTGCGCG TERM 1509 1179989 - 1180020 + G 74 -10.3 -3.57144 | gap 1, opp_overlap 1180012 GTAAATTCCTGGACC GGTTTCGCTACTTC AAGCA GAAG-GGCGAAACC TTTGCCGATGGGCAC TERM 1510 1180256 - 1180237 - g 73 -10.6 -3.33037 | opp_overlap 1180231, overlap 1180230 ATGCCAAACCATGAA CCTCGCGG CTGC CCGCGCGG GGCAAGTTACTCCTG TERM 1511 1181114 - 1181093 - g 84 -8.7 -4.27584 | ACCCGGAATGGAAAA CCGTCGCTA TCAA CAGCAACGG TGAAATGGTGGCGCC TERM 1512 1181730 - 1181719 - g 84 -5.8 -5.06414 | opp_overlap 1181726, overlap 1181721 GTCGGCCAAGAAAAA CTGC GTCC GCAG ACCGGCTGGCAGCCG TERM 1513 1182011 - 1181995 - g 71 -4.3 -4.66833 | opp_overlap 1181996, overlap 1181996 1182007 CGTGAAGCGGAAAAA GCCGGTA TGA CACCGGT AGATTATACCGTCAA TERM 1514 1182371 - 1182384 + G 74 -6.7 -4.25056 | opp_overlap 1182362 ACGATATGAATACCT CGGAT ATGC ATCCG TTTATTCATCCGCTG narG 1179970 - 1183713 + | respiratory nitrate reductase 1 alpha chain TERM 1515 1183807 - 1183793 - g 73 -5.6 -4.60041 | AGTCACCTGTAAAAA CGTCTG GAC CAGTCG CGAAGGTATGGAATA TERM 1516 1184094 - 1184066 - g 74 -9.6 -3.62354 | gap 1, opp_overlap 1184070, overlap 1184064 GCCGGAAAGCAAACA TCAGCCGATCGCG CGTC CGCGCTCG-CTGA TTACCGGCCAGCGGA narH 1183710 - 1185245 + | respiratory nitrate reductase 1 beta chain TERM 1517 1185358 - 1185374 + G 86 -10.1 -4.25848 | opp_overlap 1185353 1185358, overlap 1185359 CCTGGATAAAGAGGA TGCCCAG ACT CTGGGCG TTTTCCTGCGCGATT TERM 1518 1185359 - 1185373 + G 72 -11.4 -3.15027 | opp_overlap 1185358 1185353, overlap 1185358 CTGGATAAAGAGGAT GCCCAG ACT CTGGGC GTTTTCCTGCGCGAT narJ 1185242 - 1185952 + | respiratory nitrate reductase 1 delta chain TERM 1519 1186302 - 1186330 + G 78 -6.7 -4.53034 | overlap 1186304 TCTGTTTAGCCCACG TGTCCGCGCCA CCACTAC TGGCGCAGATA TTTTGATTCTCTCGC narI 1185952 - 1186629 + | respiratory nitrate reductase 1 gamma chain TERM 1520 1186665 - 1186650 - f 79 -10.4 -3.55444 | opp_overlap 1186650 TCTCGATGCCCTAAA CTCCGC TTCG GCGGAG TTTTTTTATGGCTGT TERM 1521 1186650 - 1186665 + F 100 -10.4 -5.65177 | opp_overlap 1186650 TCTCGATGCCCTAAA CTCCGC TTCG GCGGAG TTTTTTTATGGCTGT TERM 1522 1187039 - 1187025 - g 71 -8.5 -3.90574 | AACAAGGAGATGAAA GCGCG CAGTT CGCGC TTGGAAGCTGGTATG TERM 1523 1187105 - 1187087 - g 71 -7.4 -3.96892 | overlap 1187090 AAGCCTGATTATAAA CTAGCCAT AAA ATGGCTGG AGAAAGCGGGTAAAC SPA1113 1186871 - 1188400 + | putative secreted protein TERM 1524 1188551 - 1188569 + F 77 -8.8 -3.92373 | overlap 1188540 1188552 GCTTCGCCCTTCGGG CCGTTGCC TAC GGCAACGC TTTCTCGCTGCGCTC TERM 1525 1188552 - 1188568 + F 80 -12.3 -2.95102 | overlap 1188540 1188551 CTTCGCCCTTCGGGC CGTTGCC TAC GGCAACG CTTTCTCGCTGCGCT TERM 1526 1188726 - 1188744 + F 77 -8.8 -3.92373 | overlap 1188715 1188727 GCTTCGCCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTGCGCTC TERM 1527 1188727 - 1188743 + F 80 -12.3 -2.95102 | overlap 1188715 1188726 CTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTGCGCT TERM 1528 1188901 - 1188919 + F 77 -8.8 -3.92373 | overlap 1188890 1188902 GCTTCGCCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTGCGCTC TERM 1529 1188902 - 1188918 + F 80 -12.3 -2.95102 | overlap 1188890 1188901 CTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTGCGCT TERM 1530 1189076 - 1189094 + F 77 -8.8 -3.92373 | overlap 1189065 1189077 GCTTCGCCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTGCGCTC TERM 1531 1189077 - 1189093 + F 80 -12.3 -2.95102 | overlap 1189065 1189076 CTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTGCGCT TERM 1532 1189251 - 1189269 + F 77 -8.8 -3.92373 | overlap 1189240 1189252 GCTTCGCCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTGCGCTC TERM 1533 1189252 - 1189268 + F 80 -12.3 -2.95102 | overlap 1189240 1189251 CTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTGCGCT TERM 1534 1189660 - 1189676 + G 81 -12.3 -3.5518 | CCTCACCCTTCGGGC CGTTGCC TGC GGCAACG TTCTCTCACTATTGC SPA1121 1189532 - 1189861 + | hypothetical protein purU 1190764 - 1189922 - | formyltetrahydrofolate deformylase ychJ 1191273 - 1190815 - | hypothetical protein TERM 1535 1191312 - 1191298 - H 100 -7.8 -5.47159 | opp_overlap 1191308 1191309, overlap 1191299 CCTGAATATAAAAAA CGGCGT TGA ACGCCA GGGTGGCATTATGTT TERM 1536 1191311 - 1191299 - H 77 -9.1 -3.87211 | opp_overlap 1191308 1191309, overlap 1191298 CTGAATATAAAAAAC GGCGT TGA ACGCC AGGGTGGCATTATGT ychK 1191384 - 1192289 + | hypothetical protein TERM 1537 1192667 - 1192649 - g 71 -4.5 -4.66537 | overlap 1192651 TTCCGCAACAGAAAA TATGGCG GATAT CGCCAAA GCGTTACGCCTTGGG hnr 1192380 - 1193393 + | response regulator of RpoS galU 1193596 - 1194504 + | UTP--glucose-1-phosphate uridylyltransferase subunit GalU TERM 1538 1194532 - 1194550 + T 100 -9.5 -5.28176 | opp_overlap 1194532 1194544 AATTTTTTAACAGAA GCGCTGG TAAAT CCGGCGC TTTTTTATGCCTGGG TERM 1539 1194612 - 1194596 - T 100 -13.7 -5.81412 | opp_overlap 1194596, overlap 1194544 CTCAGGCAAAAAAAA TCCCGCC AGC GGCGGGA TTTTAAGCATCCAGG TERM 1540 1194596 - 1194612 + T 100 -13.7 -4.11216 | opp_overlap 1194544 1194596 CTCAGGCAAAAAAAA TCCCGCC AGC GGCGGGA TTTTAAGCATCCAGG hns 1195048 - 1194635 - | global DNA-binding transcriptional dual regulator H-NS TERM 1541 1194712 - 1194726 + g 78 -7.1 -4.55128 | opp_overlap 1194699 CAGCCGGTGTACGAC CCTGG CCAGT CCAGG TTTTAGTTTCACCGT tdk 1195711 - 1196328 + | thymidine kinase TERM 1542 1196496 - 1196479 - T 100 -12.7 -6.09196 | opp_overlap 1196479 GGTAAAACAAAAAAA CGGCCTC AATT GAGGCCG TTATTGTCATGCTAA TERM 1543 1196479 - 1196496 + T 95 -12.7 -3.85864 | opp_overlap 1196479 GGTAAAACAAAAAAA CGGCCTC AATT GAGGCCG TTATTGTCATGCTAA TERM 1544 1196529 - 1196542 + T 83 -4.5 -5.43487 | opp_overlap 1196529 CAGATAACGAATTAA GCGGA TTTT TTCGC TTTTTTCTCTGCTTT adh 1199203 - 1196525 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 1545 1198321 - 1198337 + g 71 -4.3 -4.59773 | overlap 1198322 GCTGACCGACGATAG CGGCGTT CAG AGCGCCA TTTTTCAGAATAACG ychE 1199680 - 1200327 + | hypothetical protein TERM 1546 1200349 - 1200371 + F 85 -12.6 -3.36492 | ACCTGTTGATTTACA GGCGGCGCCC TAA GGGGGCCGTC TTGTGACATTCCCAG TERM 1547 1201587 - 1201569 - g 74 -2.4 -5.00884 | gap 1, overlap 1201570 ATCGCCGGTAAAAAA CCCGCCA CCGATC TGG-GGG TAAAAGCGCTTGATG oppA 1200987 - 1202735 + | periplasmic oligopeptide-binding protein precursor TERM 1548 1202739 - 1202774 + F 82 -5.4 -5.14965 | opp_overlap 1202744 1202746, overlap 1202741 1202743 1202744 1202746 ATCAAACATTAATGG CAAGACATGGGACAAC TGCG GTTGTCCCATGGTGTC TTTTTTCATCGCACT TERM 1549 1202741 - 1202772 + F 76 -8 -4.20707 | opp_overlap 1202744 1202746, overlap 1202739 1202743 1202744 1202746 CAAACATTAATGGCA AGACATGGGACAAC TGCG GTTGTCCCATGGTG TCTTTTTTCATCGCA TERM 1550 1202743 - 1202770 + F 93 -12.8 -3.69447 | opp_overlap 1202744 1202746, overlap 1202741 1202739 1202744 1202746 AACATTAATGGCAAG ACATGGGACAAC TGCG GTTGTCCCATGG TGTCTTTTTTCATCG TERM 1551 1202744 - 1202769 + F 93 -16.3 -2.80583 | opp_overlap 1202744 1202746, overlap 1202743 1202741 1202739 1202746 ACATTAATGGCAAGA CATGGGACAAC TGCG GTTGTCCCATG GTGTCTTTTTTCATC TERM 1552 1202769 - 1202744 - f 93 -16.3 -3.10732 | opp_overlap 1202744 1202743 1202741 1202739 1202746, overlap 1202746 ACATTAATGGCAAGA CATGGGACAAC TGCG GTTGTCCCATG GTGTCTTTTTTCATC TERM 1553 1202746 - 1202767 + F 82 -13.1 -2.92912 | opp_overlap 1202744 1202746, overlap 1202744 1202743 1202741 1202739 ATTAATGGCAAGACA TGGGACAAC TGCG GTTGTCCCA TGGTGTCTTTTTTCA TERM 1554 1202767 - 1202746 - f 82 -13.1 -3.10879 | opp_overlap 1202746 1202744 1202743 1202741 1202739, overlap 1202744 ATTAATGGCAAGACA TGGGACAAC TGCG GTTGTCCCA TGGTGTCTTTTTTCA TERM 1555 1203123 - 1203167 + G 78 -2 -5.14965 | gap 2, opp_overlap 1203110, overlap 1203124 1203156 1203161 CACGGTCAACGATCT G-GTTGCCGCC-AGCTTCCCCG TTT CGGCGAAACTTGGCGCCGCCGC TTTTTTGCTGGCGGT oppB 1202857 - 1203777 + | oligopeptide transporter permease TERM 1556 1203824 - 1203812 - g 100 -9.1 -5.1963 | GTTAAGTAAGAAAAA CAGCG AGA CGCTG GAAAATTTCAGTGAA oppC 1203792 - 1204700 + | oligoeptide ABC transporter oppD 1204712 - 1205719 + | oligopeptide transporter ATP-binding component TERM 1557 1206639 - 1206594 - g 76 -11.8 -3.14211 | gap 1 ACCTTCGCCCATTAA CCCGCCTTCCGG-CTGCGTGT TCCGT ACACGCTGTCCGATAGCCGGG CCAGAATGCGCGCAA oppF 1205716 - 1206720 + | oligopeptide transport ATP-binding protein OppF TERM 1558 1206727 - 1206747 + F 95 -12.6 -4.21812 | opp_overlap 1206722 1206721 CCGTTATAATCGCAA GGGCTGAC AATTC GTCAGCCC TTCTTTTAGGTGAGG SPA1136 1206768 - 1207604 + | membrane transporter yciU 1207981 - 1207652 - | dsDNA-mimic protein cls 1209475 - 1208015 - | cardiolipin synthetase TERM 1559 1209819 - 1209800 - R 100 -15 -3.91897 | opp_overlap 1209789 1209786 1209813 TGTGTGAGCCAGAAA GGGCACCG TATG CGGTGCCC AACAGGCCATCCTTT yciI 1210131 - 1209835 - | YciI-like protein tonB 1210355 - 1211083 + | transport protein TonB yciA 1211543 - 1211142 - | acyl-CoA thioester hydrolase TERM 1560 1211214 - 1211202 - G 70 -3.3 -4.68511 | GGCAACATAAATAAA CAGCG CCT CGGTG GCCTTGTAGCGCTGT ispZ 1212243 - 1211704 - | intracellular septation protein A TERM 1561 1211882 - 1211869 - G 85 -2.3 -5.4833 | GCACGCAATAAAAAA CAGCG CCCA CGCCA GGTTCAGCTTTGACC TERM 1562 1212165 - 1212132 - G 85 -11.1 -3.92869 | gap 1, opp_overlap 1212156, overlap 1212135 1212156 1212159 GCACCCAGCTATAAA TCAGCAC-GATTGCCG TCG CGACAATCAGTGCGGA GGTCGCCGCATAGAT TERM 1563 1212162 - 1212135 - G 72 -11.4 -3.02745 | gap 1, opp_overlap 1212156, overlap 1212132 1212156 1212159 CCCAGCTATAAATCA GCAC-GATTGCCG TCG CGACAATCAGTGC GGAGGTCGCCGCATA TERM 1564 1212269 - 1212298 + r 72 -10.8 -2.77344 | gap 1, opp_overlap 1212266, overlap 1212268 CATCATCAACGAGCG TCG-AATGCGCCG CGTAA CGGCGCATTGCGG ATTATTGGCGAATCA yciC 1213043 - 1212300 - | hypothetical protein SPA1144 1213473 - 1213069 - | hypothetical protein TERM 1565 1213301 - 1213311 + g 74 -3.2 -4.90266 | opp_overlap 1213293 CCAATTAGCGCTTTA CAGT GCG GCTG TTTTTGGTTGGTACC TERM 1566 1213733 - 1213751 + H 74 -8.2 -3.86634 | opp_overlap 1213728 1213733 1213732 ATTATAAGAACAAAT GTGATCTG TGT TAGATCAC TTATTACTTCATTGT ompW 1213811 - 1214449 + | outer membrane protein W TERM 1567 1214492 - 1214474 - T 100 -16 -5.14563 | GTTGTGACGAAAAAA GACCCCGC CAG GCGGGGTC AAAAAAGGACATGAC SPA1146 1215409 - 1214531 - | hypothetical protein yciE 1215935 - 1215429 - | hypothetical protein yciF 1216512 - 1216009 - | hypothetical protein TERM 1568 1216085 - 1216097 + g 70 -5.5 -4.42464 | overlap 1216086 AAATCAGTTTGTTTT TCCTC GTC GAGGG TTTCTTTGAGCAGTT TERM 1569 1216560 - 1216536 - R 71 -7.2 -4.07568 | gap 1, opp_overlap 1216537 1216538, overlap 1216538 TTCTCCTGGGCAAAA TACTGCGAGCC AGAA GACTCGCAG-A TTGCTTGATAAAAGC TERM 1570 1216559 - 1216538 - R 88 -12.3 -3.63744 | opp_overlap 1216538 1216537, overlap 1216536 CTCCTGGGCAAAATA CTGCGAGCC AGAA GACTCGCAG ATTGCTTGATAAAAG yciG 1216784 - 1216602 - | hypothetical protein TERM 1571 1216832 - 1216819 - R 70 -2.3 -5.00616 | overlap 1216820 TGCTTGCTGAAAAAA TCGGT TTTA ACCGT GTCGACACCCTATTA TERM 1572 1216937 - 1216947 + r 72 -2.6 -5.09259 | opp_overlap 1216937, overlap 1216932 ATGGTTTAGAGATAA TATA TTC TATA TTTTCTTTTAGAATA TERM 1573 1217255 - 1217233 - R 81 -12.7 -3.15579 | opp_overlap 1217225 1217233 CCAACCTCTCATTAA GCCGCCAGC GTTAT GCTGACGGC TTAACCCGTTATGCG trpA 1218070 - 1217264 - | tryptophan synthase subunit alpha trpB 1219263 - 1218070 - | tryptophan synthase subunit beta TERM 1574 1218551 - 1218536 - G 70 -3.2 -4.73613 | overlap 1218546 GTATCATTAATAAAA TCGGCA AACA TCCCGA TAGCGTTTGAGCCGC trpC 1220631 - 1219273 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 1575 1219333 - 1219311 - G 70 -9.8 -3.34236 | opp_overlap 1219332, overlap 1219313 AAACCGAGGCCAGAA GACGAGCATC TTT GATGCCCGGC TGTGACTCCACACCT TERM 1576 1219331 - 1219313 - G 74 -11 -3.23572 | overlap 1219311 ACCGAGGCCAGAAGA CGAGCATC TTT GATGCCCG GCTGTGACTCCACAC TERM 1577 1220244 - 1220231 - G 71 -8.1 -3.81287 | GAGAGCATCAGTAAA CAGGC ATCG GCCTG ATAGTAACGGGCAAG trpD 1222230 - 1220635 - | bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase TERM 1578 1220809 - 1220827 + g 71 -4.4 -4.63932 | opp_overlap 1220809 TTTACCTTGTAATAA CCGCGTCA GAA TGTCACGG TTTTCTTCCGGCGTG TERM 1579 1221098 - 1221057 - G 75 -11.7 -2.87132 | gap 1, opp_overlap 1221071 1221096, overlap 1221067 GTTCCGGGCTATAGA CGCCAATCAACGCCAGCG GCGGATG CGCCGG-GTTGATCAGCG GGCCGAGTACGTTGA TERM 1580 1221108 - 1221125 + g 70 -2.7 -4.74706 | gap 1, overlap 1221096 1221111 TCAGCGGGCCGAGTA CGTTGAAC AGG GTTC-GCG TTTTTAACTGTTGGC TERM 1581 1221998 - 1221984 - G 80 -10 -4.0371 | GATGCCCCAGACAAA TGCCGA TGA TCGGCA ACTTGCCGCGTAGTC trpE 1223792 - 1222230 - | anthranilate synthase component I TERM 1582 1223003 - 1222986 - G 75 -6.9 -4.42238 | GCAGGGCAATGAAAA GCGGCGC GACG GCACCAC CTGAAATATCTCGCC TERM 1583 1223841 - 1223823 - H 100 -10.2 -5.75342 | TTTGTTCAAAAAAAA GCCCGCTT AAC AGGCGGGC CGGGTATCGTTTGGC TERM 1584 1224460 - 1224502 + G 74 -8.3 -3.9712 | gap 1, overlap 1224461 GGAAGGGGCATTGAG ACTGGCCAA-TGGCGGCGCG GTGA CGCGCGGCCACTTCGCCCGC TTTCTGGTGGAGTGC TERM 1585 1224461 - 1224501 + G 75 -11.8 -2.97951 | gap 1, overlap 1224460 GAAGGGGCATTGAGA CTGGCCAA-TGGCGGCGCG GTGA CGCGCGGCCACTTCGCCCG CTTTCTGGTGGAGTG trpH 1224053 - 1224934 + | hypothetical protein TERM 1586 1225156 - 1225196 + G 71 -8.4 -3.86202 | gap 1 TGATGTGCCGCGATT TGTCCGAGTTGTCGACCTA CTCC TACGTCGACAACGTGG-CA TTTCGTCTGATGAAA yciO 1224942 - 1225562 + | hypothetical protein TERM 1587 1225596 - 1225613 + F 79 -10.5 -3.49851 | opp_overlap 1225583 1225596 1225597, overlap 1225592 1225597 TACGCGGCCTTAAAA TGGCGCG GCAA CGCGCCG TTCATTCTCCTGTTC TERM 1588 1225613 - 1225596 - f 76 -8.3 -4.07885 | opp_overlap 1225596 1225592 1225597, overlap 1225583 1225597 TACGCGGCCTTAAAA TGGCGCG GCAA CGCGCCG TTCATTCTCCTGTTC TERM 1589 1225612 - 1225597 - f 78 -11.8 -3.04517 | opp_overlap 1225597 1225596 1225592, overlap 1225583 1225596 ACGCGGCCTTAAAAT GGCGCG GCAA CGCGCC GTTCATTCTCCTGTT TERM 1590 1225597 - 1225612 + F 76 -11.8 -2.69188 | opp_overlap 1225583 1225596 1225597, overlap 1225596 1225592 ACGCGGCCTTAAAAT GGCGCG GCAA CGCGCC GTTCATTCTCCTGTT TERM 1591 1225781 - 1225766 - g 80 -9 -4.13767 | opp_overlap 1225766 1225763 GCGTTGACGGTAAAA TCGCCA CGCT TGGCGA TCGTGTTGAAGTCAC TERM 1592 1226351 - 1226329 - g 74 -10.4 -3.53091 | ATCCCGCTGCCGAAA GGCCTGCCGC GCG GCGGCTGGAC TGAGCTCGACCTCGC yciL 1225663 - 1226538 + | 23S rRNA pseudouridylate synthase B TERM 1593 1226607 - 1226579 - T 70 -8.8 -3.36018 | opp_overlap 1226579 1226582, overlap 1226577 AATCATCAGACAAGA GGGTTTGTGCCG GATGG CGGCGCAAACGC CTTAATCCGGCCTAC TERM 1594 1226579 - 1226608 + T 74 -10.8 -3.14931 | gap 1, opp_overlap 1226579 1226577, overlap 1226582 AATCATCAGACAAGA GG-GTTTGTGCCG GATGG CGGCGCAAACGCC TTAATCCGGCCTACG btuR 1227215 - 1226625 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 1595 1226766 - 1226782 + g 73 -10.8 -3.3676 | CGTCTGGTGACTAGG GCGCGC GTTTA GCGCGC TTATGACCTCTTCCA yciK 1227973 - 1227212 - | short chain dehydrogenase TERM 1596 1227812 - 1227829 + g 77 -7.7 -4.2772 | gap 1 CTCGTCAGCAATGTG CTGCG-CG ACC CGACGCAG TTTCTCTTCGTTGCG sohB 1228210 - 1229256 + | putative periplasmic protease TERM 1597 1229265 - 1229293 + T 90 -16.1 -2.56596 | opp_overlap 1229259 1229258, overlap 1229260 GATGTAAACCGCTAT TGCCGGATGGC ATTCAGC GCCATCCGGCA TGGATTAATCAACCA yciN 1229549 - 1229298 - | hypothetical protein TERM 1598 1229333 - 1229368 + g 74 -7.7 -4.11692 | gap 1, opp_overlap 1229332, overlap 1229328 TCTCAGACAGCACAT GCGCC-AGGTGTTTAA ACATG TTAAACACCGCGGTGC TTTTAGGGGTCGGTA TERM 1599 1230873 - 1230862 - g 71 -4.4 -4.63218 | opp_overlap 1230872 TTGGCGTGAAGAAAA CCAT GATG ATGG CGCAGCGTCTGTATG TERM 1600 1231534 - 1231516 - g 76 -3.1 -5.03314 | overlap 1231518 TCTATGCGGAAAAAA TGGGTGA AATCG TCACCGA TCGGCTGGAAGAAAA topA 1229952 - 1232549 + | DNA topoisomerase I TERM 1601 1232578 - 1232595 + F 100 -14.1 -5.37043 | opp_overlap 1232576 CCACTGTAGTCAAGC GGGCCGC GTAA GCGGCCC TTTTTTATATCCCCT cysB 1232960 - 1233934 + | transcriptional regulator CysB TERM 1602 1234739 - 1234764 + F 78 -5.5 -4.88228 | opp_overlap 1234739 TCTAATCTCGTCAAA GTCCGATAA TGCGTTAT TTATCGGGC TTTTTCATCTTCGCT TERM 1603 1235166 - 1235180 + G 71 -10 -3.5944 | TGGCGGCCCGCCTGT GTCCTG ATG CAGGAC TTTACCGGTGTGCCT TERM 1604 1236804 - 1236841 + G 70 -5.6 -4.49958 | gap 1 TCGTCCGATACCTAC GGCTGGCAGTCGGAT TCAACCTAT ATCCGCCTGTC-GCC TTTCTTTGATGAAAT TERM 1605 1236872 - 1236856 - g 83 -12.3 -3.72576 | CTTTCTTTGATGAAA TGCAGGC CCA GCCTGCA CCCGTCAAAGATATC TERM 1606 1237205 - 1237195 - g 100 -8.2 -5.19212 | opp_overlap 1237194 ACCAGCAGGAAAAAA CGCC GCT GGCG GTAATTGCCGGGAAA acnA 1234911 - 1237586 + | aconitate hydratase ribA 1238232 - 1237642 - | GTP cyclohydrolase II pgpB 1238428 - 1239192 + | phosphatidylglycerophosphatase B yciS 1239342 - 1239650 + | hypothetical protein TERM 1607 1239797 - 1239741 - g 76 -3.2 -5.09762 | gap 2 GCGCAACAAACAAAA CAGGATGAAGCTAACCGCCTGTCG CGCGATTATGT CG-CAGG-GGTTAACTTCCTGCTG AGTAACCAACAAGAT yciM 1239657 - 1240826 + | hypothetical protein TERM 1608 1241364 - 1241336 - g 83 -14.5 -2.82623 | opp_overlap 1241336, overlap 1241333 GCGGGGCGAGAATGA TGGCCGCAGCGCG CGA CGCGCTGGCGCCA TTCGGTAAAGATGCG TERM 1609 1241336 - 1241364 + G 91 -14.5 -3.06183 | opp_overlap 1241336 1241333 GCGGGGCGAGAATGA TGGCCGCAGCGCG CGA CGCGCTGGCGCCA TTCGGTAAAGATGCG pyrF 1241017 - 1241754 + | orotidine 5'-phosphate decarboxylase yciH 1241754 - 1242080 + | translation initiation factor Sui1 TERM 1610 1242112 - 1242087 - T 100 -11.9 -4.4078 | GGCGGCTAATGAAAA CGCCACGGT TGTAAATT ACCGTGGCG TAAAAGTCAACTTTG osmB 1242418 - 1242200 - | lipoprotein yciT 1243429 - 1242677 - | putative regulatory protein TERM 1611 1243199 - 1243210 + g 74 -7.2 -4.18058 | CGAGGCGGCGAACTC CGCC AGTC GGCG TTTTAACATGTAGTT SPA1173 1243704 - 1243516 - | hypothetical protein yciR 1245799 - 1243817 - | RNase II stability modulator TERM 1612 1244644 - 1244629 - G 77 -3.9 -5.00616 | TTTCCGGCGAAAAAA CGCAG AACTGA CCGCG GCCGCTTTCTTTGGC TERM 1613 1245334 - 1245285 - G 90 -4.4 -5.42259 | opp_overlap 1245271 1245285 1245288, overlap 1245296 1245310 CCATTGCGAAAAAAA TTCTCAATGTAGT-GTCGGGAGGC AACC GCCTCCCGGCGACT-CATAAATAA TTTAAAGACGCTTTG TERM 1614 1246041 - 1246015 - R 100 -14.5 -4.96427 | GAAGAAGAAAAGAAA CGGCCTTTGCC TTCTC AGCAAAGGCCG TTGAGCGAGCTAAGC rnb 1247995 - 1246061 - | exoribonuclease II TERM 1615 1248094 - 1248106 + r 72 -4.8 -4.60924 | ATGAGTTAATAGGTT TCGC CCAAC GCGA TTTTTAAACGATTTA yciW 1249217 - 1248084 - | hypothetical protein TERM 1616 1248212 - 1248202 - G 74 -2.4 -5.03715 | AGTAGCGGGAAAAAA TGCG CGG CGCT AAAGTGATCGGGCGC fabI 1250205 - 1249417 - | enoyl-(acyl carrier protein) reductase TERM 1617 1252570 - 1252593 + H 73 -2.4 -5.20534 | ATATATTGTTTTTTT CGATCATTTT TTAG ATATTGATCG TTTTTATTGATTGAT SPA1179 1252659 - 1253366 + | hypothetical protein sapF 1254188 - 1253382 - | peptide transport system ATP-binding protein SapF sapD 1255182 - 1254190 - | peptide transport system ATP-binding protein SapD sapC 1256072 - 1255182 - | peptide transport system permease protein SapC TERM 1618 1256010 - 1256043 + g 90 -10.9 -4.2349 | gap 1, opp_overlap 1256009 GTCGCTATAAAATTT GCGCCAGGCAGTGCGC AGG GTGC-CTGGCGGGCGC TTTTCGCTGTAGACG SPA1183 1256195 - 1256596 + | integrase SPA1186 1257780 - 1256896 - | hypothetical protein TERM 1619 1257292 - 1257279 - G 78 -2.3 -5.24129 | overlap 1257284 GTTTTGCAGAAAAAA CAGAG TCGC CACTG GCTAGAACATTAGTG TERM 1620 1257360 - 1257376 + g 70 -3 -4.71828 | overlap 1257361 ACGCACTTAATGTGA TCTCAT CTAGT ATGAGG TTTTCTTGCTGCCGT TERM 1621 1258420 - 1258399 - g 93 -9.4 -4.77567 | opp_overlap 1258399 AGTGGCATAACAAAA CGGCTCCC TGTAGG GGAAGCCG TTATAGTGCCGCAGT TERM 1622 1258470 - 1258490 + G 74 -2.4 -5.00267 | overlap 1258472 1258478 GATTACGGGGATTTT CGTGCCCG TAAAC CGGGGAGG TTTGTTTTTCTAATT SPA1187 1258090 - 1258503 + | hypothetical protein TERM 1623 1258478 - 1258494 + F 75 -3 -5.10601 | overlap 1258472 1258470 GGATTTTCGTGCCCG TAAACC GGGGA GGTTTG TTTTTCTAATTTTAT SPA1188 1259094 - 1259519 + | putative periplasmic protein TERM 1624 1259809 - 1259828 + F 76 -4.9 -4.87626 | GAACTCCACCATAAA GGCTGCG CATTTA CGTGGCC TTTTTCGTATTCAGG TERM 1625 1260384 - 1260347 - g 77 -7.2 -4.3277 | gap 1, overlap 1260338 GATAGAGAAGATAAA TCTCCGGCAAT-CAT CATCGAAGC ATGGACTGCCGGAGA AAATAGAAAACAATA SPA1190 1260314 - 1260451 + | hypothetical protein sapB 1261448 - 1260483 - | peptide transport system permease protein SapB TERM 1626 1260976 - 1260986 + g 71 -8.2 -3.78329 | opp_overlap 1260976 TCAATAATGGCGAAA CCGG TAA CCGG TTTAACTTCATAAAG sapA 1263094 - 1261445 - | peptide transport periplasmic protein SapA precursor pspF 1264186 - 1263206 - | phage shock protein operon transcriptional activator TERM 1627 1263291 - 1263319 + g 83 -6.1 -4.87626 | gap 1, opp_overlap 1263306, overlap 1263290 TTCTGGTTAAATTTC GC-CTGCTGTAA GCTACG TTGCAGCAGCGC TTTTTCCTGTTGCAG TERM 1628 1264432 - 1264420 - g 89 -9.1 -4.56597 | GCGTTGTTGGAAAAA GCGGA AGA TCCGC AGAAGCTGGTGCGCC pspA 1264357 - 1265025 + | phage shock protein PspA pspB 1265085 - 1265309 + | phage shock protein B pspC 1265309 - 1265668 + | DNA-binding transcriptional activator PspC pspD 1265691 - 1265909 + | peripheral inner membrane phage-shock protein pspE 1265985 - 1266299 + | thiosulfate:cyanide sulfurtransferase (rhodanese) TERM 1629 1266307 - 1266297 - f 89 -4 -5.72207 | opp_overlap 1266297 CCGAAAGTAAAAAAA TAGA TAA TCTA TTGCTCAATACTCAT TERM 1630 1266331 - 1266347 + F 83 -10.8 -3.80018 | opp_overlap 1266328 TACTCATACTAACCG CGGCGC TTAAT GCGCCG TTGTTGATCTCTCCG TERM 1631 1266396 - 1266411 + F 71 -3.3 -4.84921 | TTTTGCACATATCTA TAACG CAGGCT CGTTA TTATTTTTTCTTCTC ycjX 1266448 - 1267845 + | putative ATP-binding protein ycjF 1267842 - 1268903 + | hypothetical protein tyrR 1269051 - 1270592 + | DNA-binding transcriptional regulator TyrR TERM 1632 1270623 - 1270600 - T 100 -13.2 -5.70829 | opp_overlap 1270600 1270603 AAGAGTAGAAAAAAA GAAGGCCTCC GGAT AGAGGCCTTC TTGTGACAAAAGAGC TERM 1633 1270600 - 1270623 + T 81 -12.5 -3.28712 | opp_overlap 1270600, overlap 1270603 AAGAGTAGAAAAAAA GAAGGCCTC CGGATA GAGGCCTTC TTGTGACAAAAGAGC TERM 1634 1270603 - 1270620 + T 72 -8.4 -3.78934 | opp_overlap 1270600, overlap 1270600 AGTAGAAAAAAAGAA GGCCTC CGGATA GAGGCC TTCTTGTGACAAAAG TERM 1635 1270666 - 1270681 + T 77 -10.4 -3.41878 | opp_overlap 1270640 1270664 1270638 1270637 1270660, overlap 1270664 ACTGACAAACGTAGC GCCAGC AGGC GCTGGC TTATGCCTTCAGGCC tpx 1271188 - 1270682 - | thiol peroxidase TERM 1636 1271626 - 1271655 + G 76 -5 -4.72272 | gap 3, opp_overlap 1271620 GGCAGCAAAGCCTTG CCGGGCTGCTCGGCG TGA CGCTG-GC--CCCGG TTTTTACTACCGCGC ycjG 1271304 - 1272269 + | putative mandelate racemase ycjI 1272972 - 1272244 - | murein peptide amidase A mppA 1273162 - 1274775 + | periplasmic murein peptide-binding protein MppA TERM 1637 1274841 - 1274807 - f 82 -12 -3.30701 | TTTGATGAAAGGTAA CCACGCCCGCCGCCTG GTG CTGGCAGAAGGCATGG GGATTAAGCGAGCGC TERM 1638 1276511 - 1276530 + G 76 -2.7 -5.03314 | opp_overlap 1276482 1276480 ACCTGAACCACCGCA CCGGGCG TACCAC CGACTGG TTTTTTACGCGTGAG SPA1207 1275919 - 1276824 + | putative transcriptional regulator SPA1208 1277100 - 1277969 + | putative oxidoreductase TERM 1639 1278009 - 1278045 + T 80 -12.4 -3.05963 | opp_overlap 1278004 1278014, overlap 1278012 CGCATGAACAGCTTC TAACACGGTTGCCG GAGCGTAGA CGGCAACCGTGTGA TATTCGCCTGGCCGT TERM 1640 1278012 - 1278042 + T 83 -14.1 -2.75074 | opp_overlap 1278004 1278014, overlap 1278009 ATGAACAGCTTCTAA CACGGTTGCCG GAGCGTAGA CGGCAACCGTG TGATATTCGCCTGGC TERM 1641 1278040 - 1278014 - T 75 -10.9 -3.04248 | opp_overlap 1278012 1278009, overlap 1278004 GAACAGCTTCTAACA CGGTTGCCG GAGCGTAGA CGGCAACCG TGTGATATTCGCCTG yjgI 1278773 - 1278060 - | oxidoreductase TERM 1642 1278305 - 1278323 + g 70 -8.8 -3.72893 | opp_overlap 1278287 1278286, overlap 1278306 1278308 GGGCCAGGCCGCGCG CCAGCCCT TGC AGGGCTGA TTTACTGGCGGCGTA TERM 1643 1278306 - 1278322 + g 72 -12.3 -2.83522 | opp_overlap 1278287 1278286, overlap 1278305 1278308 GGCCAGGCCGCGCGC CAGCCCT TGC AGGGCTG ATTTACTGGCGGCGT SPA1210 1278851 - 1279441 + | putative transcriptional regulator TERM 1644 1279473 - 1279459 - f 73 -2.1 -5.15634 | overlap 1279460 CAGCGCATCAAAAAA CCTGA GCCAA TCAGA TACGGGCAAACAGGG SPA1211 1279570 - 1279806 + | putative lipoprotein TERM 1645 1280322 - 1280348 + T 72 -5.3 -4.63107 | gap 1, overlap 1280320 GCTTCGCGAAAAGGT GTTAAGC-ACTG CCTT CAGTCGTTTAAC TTTTGCTTCTTTACT TERM 1646 1280709 - 1280697 - T 83 -6.3 -5.02074 | opp_overlap 1280697 1280696 CGAGCGGGTAAAAAA GAGAT TGA ATCTC ACTTTGTTCTGCAAT SPA1213 1282367 - 1281516 - | putative transcriptional regulator SPA1214 1282665 - 1283510 + | putative lipoprotein TERM 1647 1283565 - 1283545 - f 73 -11.1 -2.64322 | overlap 1283544 1283542 ATCTTATTTAAATAC TCCCTCTGC CAG GCAGGGGGA TATAGCAGGAGACAA TERM 1648 1284240 - 1284230 - f 80 -6.8 -4.63932 | GATCTGCGAACAAAA GGCA CGC TGCC CGATTTTCCCTGGTT SPA1216 1285595 - 1286422 + | hypothetical protein SPA1217 1286521 - 1287078 + | putative thiol peroxidase SPA1218 1287523 - 1287185 - | hypothetical protein SPA1219 1288237 - 1287551 - | hypothetical protein TERM 1649 1288097 - 1288109 + g 70 -9.1 -3.64488 | opp_overlap 1288096, overlap 1288077 1288074 TTGGCCGTTAATTAC GGCCT GAC AGGCC TCTTTTAGCGCGATT TERM 1650 1288306 - 1288293 - g 79 -3.1 -5.2189 | overlap 1288282 1288294 1288298 CCAATGACCAAAAAA GTCAA CTTA TCGAC CGCGGCGGGCGCCGA TERM 1651 1288506 - 1288516 + G 75 -6.8 -4.38712 | overlap 1288487 GCGGCAATGGGAGTG TCCG TGG CGGA TTTTGTCAACGTCGC SPA1220 1288281 - 1288883 + | DNA-binding protein TERM 1652 1288925 - 1288966 + T 100 -13.1 -5.18371 | gap 1, opp_overlap 1288928, overlap 1288930 1288931 CGTCATTCGGACAGG GAAGCCTCGGTGCCCGATAA GCG TTATCGGGCACCG-GCTATC TTTTATTTTATCGCA TERM 1653 1288962 - 1288928 - T 90 -14.5 -3.12668 | gap 2, opp_overlap 1288925 1288930 1288931 CATTCGGACAGGGAA GCCTCGGTGCCCGATAA GCG TTATCGGGCACC--GGC TATCTTTTATTTTAT TERM 1654 1288930 - 1288962 + T 100 -17.1 -3.67607 | opp_overlap 1288928, overlap 1288925 1288931 TTCGGACAGGGAAGC CTCGGTGCCCGATAA GCG TTATCGGGCACCGGC TATCTTTTATTTTAT TERM 1655 1288931 - 1288961 + T 100 -20.6 -2.78124 | opp_overlap 1288928, overlap 1288930 1288925 TCGGACAGGGAAGCC TCGGTGCCCGATAA GCG TTATCGGGCACCGG CTATCTTTTATTTTA ynaI 1290000 - 1288969 - | hypothetical protein ynaJ 1290239 - 1290493 + | hypothetical protein ydaA 1291495 - 1290548 - | universal stress protein UspE fnr 1292398 - 1291646 - | fumarate/nitrate reduction transcriptional regulator TERM 1656 1291682 - 1291694 + g 80 -9.1 -4.21908 | overlap 1291671 1291692 ACCGGCGAGGGCCGC CAGCG CAT CGCTG TTTTCAATAGTAATA TERM 1657 1291936 - 1291922 - G 71 -8.6 -3.78934 | overlap 1291925 TTTCTTCGACAATAA CAGGAT CAT ATCCTG ATCGCCTTTAATTTC TERM 1658 1292233 - 1292249 + g 78 -6.5 -4.62783 | CTTTAAACAGAGTTT GCCCTTT CTG AATGGGC TTTTTGCGCTCGATG ogt 1293109 - 1292594 - | O-6-alkylguanine-DNA:cysteine-protein methyltransferase ydaL 1293374 - 1293937 + | hypothetical protein TERM 1659 1295520 - 1295538 + F 95 -7.4 -5.27923 | overlap 1295484 ATACATGTTTGGTAA GCGCCT GTTGCTA AGGCGC TTTTTTCTCACGTTC zntB 1295648 - 1296631 + | zinc transporter TERM 1660 1296821 - 1296840 + F 100 -9.3 -5.83822 | ATTGATTCGTACGAC GCCGACT TAGATT AGTCGGC TTTTTTTTGCCTGTA TERM 1661 1297154 - 1297183 + G 91 -15.1 -3.08813 | AATGTTTTGCCCGCC GCCCAGCTCAATA ACCT TACTGAGCTGGGC TATCTTGAGATGACG TERM 1662 1298394 - 1298370 - g 83 -10.1 -4.13014 | opp_overlap 1298374, overlap 1298374 CGGATATCGGCAAAA TTAACGTGCAT CCA ATGCACGTTTA CGTCGCCGTACGTCA TERM 1663 1298390 - 1298374 - g 76 -10.9 -3.67622 | opp_overlap 1298374, overlap 1298370 TATCGGCAAAATTAA CGTGCAT CCA ATGCACG TTTACGTCGCCGTAC TERM 1664 1298374 - 1298390 + G 76 -10.9 -3.65351 | opp_overlap 1298374 1298370 TATCGGCAAAATTAA CGTGCAT CCA ATGCACG TTTACGTCGCCGTAC dbpA 1297118 - 1298491 + | ATP-dependent RNA helicase DbpA TERM 1665 1298496 - 1298533 + T 70 -9.9 -3.00106 | gap 1, opp_overlap 1298501, overlap 1298495 TATTAAAATGATCGA TAGTATGGCGTCTCAGCG GAG TGCTGAGACGCC-TGCAG ATTATTTCACTTCGA TERM 1666 1298529 - 1298501 - T 86 -14.6 -2.66008 | opp_overlap 1298496 1298495 AAATGATCGATAGTA TGGCGTCTCAGC GGAGT GCTGAGACGCCT GCAGATTATTTCACT ydaO 1299470 - 1298535 - | C32 tRNA thiolase TERM 1667 1300417 - 1300432 + G 95 -6.2 -5.29445 | opp_overlap 1300417 TTATATGTGAAGAAA TCCAAT CAAC ATTGGA TTTTTATTATTCAAA TERM 1668 1301373 - 1301387 + G 70 -5 -4.37886 | ATAACATTTTACCGA TCTTCT GAT GGAAGA TTTTATCAGGCGTCA SPA1232 1300158 - 1301990 + | hypothetical protein SPA1233 1302265 - 1302603 + | putative multidrug transporter ynaF 1303090 - 1302656 - | hypothetical protein TERM 1669 1303517 - 1303536 + r 100 -13.6 -5.95539 | opp_overlap 1303510 1303517 CGTATAAATTGACAA GCCCGAAC GGAT GTTCGGGC TTTTTTTATTTCCAG TERM 1670 1303536 - 1303517 - R 93 -13.6 -3.50047 | opp_overlap 1303517, overlap 1303510 CGTATAAATTGACAA GCCCGAAC GGAT GTTCGGGC TTTTTTTATTTCCAG nifJ 1307096 - 1303572 - | pyruvate-flavodoxin oxidoreductase TERM 1671 1305203 - 1305187 - G 77 -7.9 -4.37092 | overlap 1305188 ACGGTTTTCACAAAA TCCGGCG CGG CGTCGGA GACGACCGGCGGGCG SPA1237 1307483 - 1307638 + | hypothetical protein hslJ 1308092 - 1307682 - | heat-inducible protein TERM 1672 1308196 - 1308173 - R 95 -12.4 -4.13767 | overlap 1308174 GGGGTTATCCGAAAA TGCTCCCCTG AGCG CAGGGGAGCG ATAGGATTAGAACAG TERM 1673 1308195 - 1308174 - R 93 -15.9 -3.08046 | overlap 1308173 GGGTTATCCGAAAAT GCTCCCCTG AGCG CAGGGGAGC GATAGGATTAGAACA ldhA 1309192 - 1308203 - | D-lactate dehydrogenase TERM 1674 1308969 - 1308994 + g 74 -2.4 -5.09173 | opp_overlap 1308973, overlap 1308966 TTAAATCCGGCGCAA CGCAGCGCGA TGTATT TCACGCCGTG TTTTTTCAGCTCTTC TERM 1675 1311332 - 1311320 - g 72 -4.1 -4.77165 | overlap 1311315 TGCCGGATAACAAAA TCAAC GGC GTCGA TTTCATTCTGCCATT TERM 1676 1311967 - 1311977 + G 70 -6.8 -4.0896 | overlap 1311957 1311961 GTGTTTACGCTGTGG CGCA GTT TGCG TTTTGGCGACAATTT TERM 1677 1312028 - 1312014 - g 71 -4.2 -4.63486 | overlap 1312016 ATGGCTTGAACAAAA TACAGC GTT GCCGCA ACCTCCTTGCCGGAA ydbH 1309432 - 1312068 + | hypothetical protein ynbE 1312068 - 1312259 + | putative lipoprotein ydbL 1312267 - 1312590 + | putative secreted protein TERM 1678 1313020 - 1313043 + G 71 -4.6 -4.55798 | gap 1 ATATGGGGTCAATGT GGCG-TGCATT GAA AATGTGTCGCC TTTTGATTTCGCCTG TERM 1679 1313169 - 1313144 - g 72 -11.9 -2.84234 | overlap 1313140 1313143 1313147 TACGAACCTAAGAAG TCACCTCCCGT CGAA ACGGGAGGCAA AAATATTTAAGCGGC TERM 1680 1313166 - 1313147 - g 78 -13.6 -2.67316 | overlap 1313140 1313144 1313143 GAACCTAAGAAGTCA CCTCCCGT CGAA ACGGGAGG CAAAAATATTTAAGC SPA1243 1312730 - 1313179 + | hypothetical protein acpD 1313781 - 1313176 - | azoreductase TERM 1681 1313728 - 1313711 - G 75 -6.3 -4.63932 | overlap 1313713 CATTGTTCAATAAAA TAGTCAG TCAA CTGACCA GACTGAGAGTACCCT hrpA 1314039 - 1317884 + | ATP-dependent RNA helicase HrpA TERM 1682 1318723 - 1318740 + G 71 -10.5 -3.27994 | opp_overlap 1318711 CTACGCTGCGCAGTG CGCGCCG TGAG CGGCGTG TTGGTCTGGGGTTAA ydcF 1317948 - 1319255 + | putative inner membrane protein TERM 1683 1319587 - 1319605 + G 72 -3.8 -4.70319 | CGGAATCCGATATTG CGGATGGT AAA ATTGTCCG TTTTGATTTTGCTGG TERM 1684 1319676 - 1319654 - g 78 -6.8 -4.65895 | GGCGTTAGCGAAAAA GCCCTGGGGC GGC GCGCCGGGAC CCTTGCCGGATACGC mdoD 1319475 - 1321130 + | glucan biosynthesis protein D SPA1248 1321335 - 1321901 + | hypothetical protein SPA1249 1321913 - 1323115 + | putative glycolate oxidase TERM 1685 1323130 - 1323150 + T 90 -9.7 -4.4084 | opp_overlap 1323130 ATACTGTAATATAGA GGTCGGATA TTA TACCCGACC TTTTCCTGTGTGATT TERM 1686 1323150 - 1323130 - T 78 -11.9 -3.10513 | opp_overlap 1323130 ATACTGTAATATAGA GGTCGGATA TTA TACCCGACC TTTTCCTGTGTGATT aac 1323607 - 1323170 - | aminoglycoside 6'-N-acetyltransferase sgcR 1324398 - 1323607 - | putative regulatory protein TERM 1687 1324021 - 1324035 + g 83 -7.2 -4.55798 | GTTAGCGATTTTGAT GTCATT GCA AATGAC TTTTACTTTGGCGTC SPA1252 1325046 - 1324414 - | ribulose-phosphate 3-epimerase sgcA 1325495 - 1325058 - | putative phosphotransferase enzyme TERM 1688 1325598 - 1325624 + r 100 -11.6 -4.78237 | overlap 1325599 GTTATCGCTCTCTGC AGGGGATAAGCG TTT TGCTTATCCCCA TTTTATTGTCGGATA TERM 1689 1325599 - 1325623 + r 100 -15.1 -3.46219 | overlap 1325598 TTATCGCTCTCTGCA GGGGATAAGCG TTT TGCTTATCCCC ATTTTATTGTCGGAT sgcQ 1326433 - 1325627 - | hypothetical protein TERM 1690 1325687 - 1325704 + g 80 -4.7 -5.03715 | opp_overlap 1325687, overlap 1325689 1325690 CGCCTGGTCGACAAA GTTGGCG AAGA CGCCGTC TTTTTTAAACGTGGT sgcC 1327760 - 1326447 - | putative phosphotransferase enzyme SPA1256 1328052 - 1327771 - | putative phosphotransferase enzyme TERM 1691 1327968 - 1327986 + g 74 -3 -4.86001 | overlap 1327970 CCGCAATGCCTTGCT CCGCAAGA AAG TCCTGCAG TTTTTGTGCAATCAT SPA1257 1329167 - 1328049 - | hypothetical protein TERM 1692 1328517 - 1328504 - G 77 -8.1 -4.08216 | GCACGCGTCGTAAAA CGGGA ACAA TCCCG CGAATATTGAACTCT rimL 1329384 - 1329923 + | ribosomal-protein-L7/L12-serine acetyltransferase ydcK 1330900 - 1329920 - | putative transferase TERM 1693 1330769 - 1330783 + g 79 -11.4 -3.63895 | opp_overlap 1330762 GGCATCAACCCAGCC GCCGGA GGT TCCGGC TTTAACATCGTTAAA TERM 1694 1331019 - 1331008 - g 74 -2.2 -5.06223 | overlap 1331018 ATAAATTAAACAAAA TGCG TAAT CACA AGCAGAGCGATCGCG TERM 1695 1331783 - 1331794 + G 72 -2.2 -4.86621 | ACAACCGTTTAATGC TTCC TTCT GGAG TTTTTCGTTCGGCGT tehA 1331007 - 1332020 + | potassium-tellurite ethidium and proflavin transporter tehB 1332007 - 1332603 + | tellurite resistance protein TehB TERM 1696 1332809 - 1332848 + G 87 -13.6 -3.30629 | overlap 1332806 1332810 TACTGGCTTGCTGGC GTTATCCGGCTGTGCGTC TAAA GTCACACAGCCGGATAAG TATTCTGGATTCTTA TERM 1697 1332810 - 1332847 + G 90 -17.1 -2.57654 | overlap 1332809 1332806 ACTGGCTTGCTGGCG TTATCCGGCTGTGCGTC TAAA GTCACACAGCCGGATAA GTATTCTGGATTCTT SPA1262 1332759 - 1333427 + | putative lipoprotein TERM 1698 1333784 - 1333774 - f 100 -8.2 -5.72053 | opp_overlap 1333775, overlap 1333775 CAAGTAAATAAAAAA CGCC TGC GGCG GCGGCCGCTAACCAG TERM 1699 1333887 - 1333876 - f 77 -7.2 -4.42974 | overlap 1333883 TGCAGATAGAATAAA CGCC AAAT GGCG AAAGCAGCAGCGCCA TERM 1700 1333969 - 1333979 + F 76 -8.2 -4.14243 | CCTTCATTGTGGCGA CGCC GGG GGCG TTTTGCGATGCCATC TERM 1701 1334696 - 1334706 + G 70 -6.8 -4.18018 | TGACGCCGCAATTGC TCGC GAA GCGA TTTTGCATGGCGCAG TERM 1702 1335467 - 1335481 + G 100 -4.2 -5.8187 | GGCGCGTGCATCGGT TGGTCG GAC CGAGCA TTTTTTTGTTCCCTC ydcP 1334637 - 1336601 + | putative peptidase yncJ 1336832 - 1336602 - | hypothetical protein TERM 1703 1338145 - 1338160 + H 76 -4 -5.05505 | gap 1, overlap 1338147 CCATCGGTTTGCCTA TC-GGTG AAA CACCTGA TTTTTGCTTTGTCCT ugtL 1338584 - 1338982 + | hypothetical protein SPA1268 1339015 - 1339245 + | hypothetical protein TERM 1704 1339881 - 1339869 - g 77 -4.1 -5.05577 | AAACCAAATGAAAAA CGAAT TTT ATCCG CAGGTAGAGAAAAAT pcgL 1339507 - 1340277 + | D-alanyl-D-alanine dipeptidase ydcR 1340413 - 1341837 + | putative regulatory protein ydcW 1341973 - 1343397 + | gamma-aminobutyraldehyde dehydrogenase TERM 1705 1343480 - 1343432 - f 81 -5.2 -5.25656 | gap 1, overlap 1343434 1343435 AAAATCATGAAAAAA TA-GGCGGGTATCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCAGCA AGTACTCAAAGGTTG TERM 1706 1343477 - 1343434 - f 95 -11.6 -4.23218 | overlap 1343432 1343435 AATCATGAAAAAATA GGCGGGTATCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCA GCAAGTACTCAAAGG TERM 1707 1343476 - 1343435 - f 100 -15.1 -3.12304 | overlap 1343434 1343432 ATCATGAAAAAATAG GCGGGTATCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGC AGCAAGTACTCAAAG TERM 1708 1343761 - 1343749 - f 81 -3.3 -5.27335 | TGTGTCAAATAAAAA GAGCA TAT TGCGC GCGTTTTTTCCTCTG ydcX 1343796 - 1343969 + | putative inner membrane protein TERM 1709 1343972 - 1344000 + T 72 -5.2 -4.57073 | overlap 1343973 1343976 TTCGCTTTTCTGACC TCAAGCCCGATA CAGGT TACCGGGCATGG TTTTTCCGCCAGGTC srfC 1346158 - 1344014 - | putative virulence effector protein TERM 1710 1345288 - 1345264 - G 73 -9.2 -3.82098 | opp_overlap 1345264 GAGAATCAAGCGAAA GGCTGACCGC ATTGA GCAGTCGGCC TTCCTTAACCGGATG TERM 1711 1345416 - 1345428 + g 70 -6.9 -4.16284 | overlap 1345417 GGCGCCGCCAGTTCC TCGGC ATG GCCGG TTTGTTGCAACATAT srfB 1349136 - 1346155 - | putative virulence effector protein TERM 1712 1346354 - 1346369 + g 70 -6.8 -4.11484 | CGGACATTCAGTACG CCGTCG CCAG CGATGG TTTTCGCCAGTTCGG TERM 1713 1348597 - 1348579 - G 74 -6.6 -4.23213 | GGCATACTGAAGAAA CGACTCGC GCA GCCAGCCG TCAATCCATGTCTGG srfA 1350340 - 1349141 - | putative virulence effector protein TERM 1714 1349567 - 1349547 - G 73 -10.3 -3.32946 | opp_overlap 1349546 1349548, overlap 1349545 GCGGCAATGATAACA GGCGCCTCC GGC AGCGGCGCC GCTTTGGGGGCGGGC TERM 1715 1349725 - 1349715 - G 78 -2.4 -5.252 | overlap 1349717 GATGGCCAGAAAAAA GGCG TGG CGAC GGCGGCGATAACCAC TERM 1716 1349919 - 1349933 + g 73 -5.6 -4.64676 | opp_overlap 1349915 1349916 GCCTGACTAAACGCC GCCTCT ACC AGCGGC TTTTCTTCGGGCTCC ydcY 1350690 - 1350923 + | hypothetical protein TERM 1717 1350962 - 1350934 - T 72 -6.6 -4.30978 | overlap 1350935 TGTAACCCATTAAAA CTGGCGCTTCGC AATCA GCCATGCGCCAA TGACCAGCAACAGCG ydcZ 1351377 - 1350928 - | hypothetical protein TERM 1718 1351157 - 1351135 - G 100 -6.3 -5.56264 | gap 1, overlap 1351138 GGCAAATACAAAAAA TGA-CCCCAG CAAA CCGGGGATCA ATGTCCACCAGCGCA yncA 1351892 - 1351377 - | putative acetyltransferase TERM 1719 1351585 - 1351595 + g 70 -6.8 -4.08216 | GCTTCGTCGATCAGT CTGC TGA GCAG TTTTCGCCCCAGTCC TERM 1720 1352297 - 1352320 + G 71 -9.5 -3.51329 | ATGAACCCTCTTATG CGCCGCCAG TTGAAC CTGGCTGCG TTATGGTTGGCGGTA yncB 1352071 - 1353141 + | putative NADP-dependent oxidoreductase TERM 1721 1353168 - 1353150 - f 100 -8.8 -5.63517 | TGCGTAAAGAAAAAA TGGCGGCA TTA TGTCGCCA TAAAAATGTGCAAAT TERM 1722 1354108 - 1354092 - g 71 -9.5 -3.48924 | CCACTGCCTACAGAA CGTTTTG CAA CAAAACG TAGCGACGATTAAAA yncC 1353475 - 1354140 + | putative DNA-binding transcriptional regulator TERM 1723 1354188 - 1354162 - T 100 -15.2 -3.26473 | opp_overlap 1354158 1354155 1354168, overlap 1354163 1354166 TGAAACTATGACTAA TCAATAGCGGGG ATG CCCCGCTATTGC CGGATATTTATTCAA TERM 1724 1354187 - 1354163 - T 100 -18.7 -2.55402 | opp_overlap 1354158 1354155 1354168, overlap 1354162 1354166 GAAACTATGACTAAT CAATAGCGGGG ATG CCCCGCTATTG CCGGATATTTATTCA TERM 1725 1354184 - 1354166 - T 93 -14.6 -3.41961 | opp_overlap 1354158 1354155 1354168, overlap 1354163 1354162 ACTATGACTAATCAA TAGCGGGG ATG CCCCGCTA TTGCCGGATATTTAT TERM 1726 1354168 - 1354182 + T 80 -12.8 -3.04515 | opp_overlap 1354166 1354163 1354162, overlap 1354158 1354155 TATGACTAATCAATA GCGGGG ATG CCCCGC TATTGCCGGATATTT yncD 1356316 - 1354196 - | TonB-dependent receptor TERM 1727 1354649 - 1354665 + g 74 -7.2 -4.10855 | overlap 1354650 1354658 1354662 GTCCAACGCGAGCTC TGCGCC CTGGC GGCGCG TTTTGCCCGCGTTTT TERM 1728 1354662 - 1354676 + g 77 -4.2 -4.88736 | overlap 1354650 1354649 1354658 TCTGCGCCCTGGCGG CGCG TTTTGCC CGCG TTTTTGTAGGTAGTG TERM 1729 1355328 - 1355341 + g 81 -8.1 -4.2349 | AGTGTAATTACGCCG CCAGC CTGG GCTGG TTTTAGCTGTGCCAC TERM 1730 1355627 - 1355642 + g 82 -5.4 -5.00616 | overlap 1355629 AAGGCGCACGCCCAG TTTGGC ATTA GCCAGA TTTTTTCGCGCGCCG TERM 1731 1356604 - 1356617 + G 71 -5.9 -4.33582 | overlap 1356602 CGTCATCTTTTTTCG CCGCG CCTG CGTGG TTCTTTATTGTTAGG SPA1282 1356580 - 1357641 + | ATP-binding protein SPA1283 1357786 - 1358007 + | putative lipoprotein TERM 1732 1358072 - 1358049 - T 76 -8.8 -3.74747 | gap 1, overlap 1358050 GCAACGCGCATTAAA TCCGGCAGGCC TGG GGC-TGCCGGG GAAGGGTAATGTTAT TERM 1733 1358071 - 1358050 - T 79 -12.3 -2.84527 | gap 1, overlap 1358049 CAACGCGCATTAAAT CCGGCAGGCC TGG GGC-TGCCGG GGAAGGGTAATGTTA ansP 1359577 - 1358084 - | L-asparagine permease SPA1285 1360090 - 1360722 + | hypothetical protein TERM 1734 1360817 - 1360783 - f 82 -7.8 -4.56775 | opp_overlap 1360769, overlap 1360791 AGCTGGCGTTAAAAA TTTTAACACGCCGCTA TTT TGGCGGCGTGTCGCAA AGAGATTCTCAGAAC TERM 1735 1360809 - 1360791 - f 74 -10.2 -3.17553 | opp_overlap 1360769, overlap 1360783 TTAAAAATTTTAACA CGCCGCTA TTT TGGCGGCG TGTCGCAAAGAGATT nhoA 1361005 - 1361850 + | N-hydroxyarylamine O-acetyltransferase yddE 1362779 - 1361886 - | hypothetical protein TERM 1736 1362205 - 1362195 - G 90 -4.6 -5.37593 | opp_overlap 1362204 CTGGAAAGGAAAAAA GCCG TTA CAGC CAATTTGCTGGCTGA TERM 1737 1362811 - 1362844 + r 100 -8.7 -5.27335 | opp_overlap 1362812, overlap 1362812 CTGAAGAATCATCAT AGCCTGTGCGTTGCC GAAT GACGACGCCCAGGCG TTTTTCTTTGCCCGG TERM 1738 1362812 - 1362843 + r 93 -12.2 -3.75678 | opp_overlap 1362812, overlap 1362811 TGAAGAATCATCATA GCCTGTGCGTTGCC GAAT GACGACGCCCAGGC GTTTTTCTTTGCCCG TERM 1739 1362843 - 1362812 - R 79 -12.2 -2.89421 | opp_overlap 1362812 1362811 TGAAGAATCATCATA GCCTGTGCGTTGCC GAAT GACGACGCCCAGGC GTTTTTCTTTGCCCG narV 1363565 - 1362885 - | nitrate reductase 2, gamma subunit narY 1365787 - 1364243 - | respiratory nitrate reductase 2 beta chain TERM 1740 1364821 - 1364831 + g 70 -6.8 -4.09685 | overlap 1364798 GCGACCGTTGGGCGG CGTC GAT GACG TTTTGCGGGATGCCC TERM 1741 1365611 - 1365623 + g 71 -4.8 -4.62069 | GCCTTGCCACTCCTG CTGG TCTTC CCAG TTTTTGGGATAGCCG TERM 1742 1365690 - 1365704 + g 73 -5.6 -4.59773 | TATTCCATCCCTTCA CGTCCG GTC CAGACG TTTTTACAGGTGACG narZ 1369524 - 1365784 - | respiratory nitrate reductase 2 alpha chain TERM 1743 1366476 - 1366505 + g 84 -13.7 -3.08776 | gap 1, overlap 1366472 AAGAGATATGCTCGC TTTCCAGCCCTGAC CAG GTC-GGGCTGGAGA TAATTTTGCGCGGTT TERM 1744 1369018 - 1369032 + g 71 -10 -3.57144 | opp_overlap 1369020 GTTAGCGGCGGCAAT GAGCTG ATT CAGCTC TTTCCAGCTCGAACG TERM 1745 1369238 - 1369257 + g 100 -16.4 -3.2827 | CAGGAGTAGCTGGCG CCGCGCGG GCAG CCGCGCGG TTCATGGTTCGGTAA narU 1371004 - 1369616 - | nitrite extrusion protein TERM 1746 1369824 - 1369791 - G 73 -5.1 -4.54449 | gap 1, overlap 1369792 ATAGCGGAGATAAAA CCGAGTGCGGCGGCGG TAT CCGTCACCGCT-TCGC GCTGCGCCTGCTCAT TERM 1747 1371055 - 1371069 + r 73 -7.8 -4.12599 | opp_overlap 1371051 1371055 1371053 CACAAAAAAGAGACA GAGCGT CAC GCGCTC TTTTGAGAACTTATT SPA1293 1371796 - 1371218 - | putative regulatory protein TERM 1748 1373082 - 1373066 - g 93 -9.3 -4.82901 | GCGCCGGCAGAAAAA GCGGCGG CGG CCGGCGC GATAGAAACGATGGC smvA 1371914 - 1373401 + | methyl viologen resistance protein SmvA SPA1295 1373746 - 1373426 - | putative cytoplasmic protein TERM 1749 1373906 - 1373926 + r 91 -11.1 -4.19624 | opp_overlap 1373906 ACATCAAGAGAAAAA GCCAGCCCT GAA AGGACTGGC TTTGTATTCAGACTA TERM 1750 1373926 - 1373906 - R 100 -13.3 -5.13344 | opp_overlap 1373906 ACATCAAGAGAAAAA GCCAGCCCT GAA AGGACTGGC TTTGTATTCAGACTA nmpC 1375038 - 1373950 - | new outer membrane protein; porin TERM 1751 1374495 - 1374508 + g 71 -4.5 -4.63527 | gap 1, overlap 1374489 1374485 CGTTAGACTCGTACG CG-CCG TCA CGGTCG TTTTTGCCCTGGTAC yddG 1376442 - 1375561 - | hypothetical protein fdnG 1376720 - 1379767 + | putative molybdopterin oxidoreductase TERM 1752 1379859 - 1379825 - g 74 -7.9 -4.15222 | gap 1, opp_overlap 1379833, overlap 1379826 ACGGTCCGCAACAAA CGCCATCACGCCGCCT CCGC AGGCG-CGTGATTACA AAGCCGAAGTCGCGA TERM 1753 1380583 - 1380543 - g 77 -11.2 -3.55801 | gap 1, opp_overlap 1380543 1380534 1380560, overlap 1380555 ATCAATCTGTGGAAA GGGGCGCTAAAA-CCGCTG GCCG CAGCGGGCTTTATCGCCAC TTTCGCCGGTCTGAT TERM 1754 1380570 - 1380555 - g 86 -10.4 -4.0896 | opp_overlap 1380543 1380534 1380560, overlap 1380543 AAAGGGGCGCTAAAA CCGCTG GCCG CAGCGG GCTTTATCGCCACTT fdnH 1379781 - 1380665 + | formate dehydrogenase-N, Fe-S beta subunit, nitrate-inducible fdnI 1380658 - 1381314 + | formate dehydrogenase-N subunit gamma TERM 1755 1381328 - 1381366 + T 87 -14.9 -2.91511 | gap 1, opp_overlap 1381335 1381338, overlap 1381335 AATTCTTTCGCAATC TGATAAACAAGGCGCTAT CCTG GTAGCGCCTTGTTT-TCA TCTGCTGTCTGTATA TERM 1756 1381335 - 1381360 + T 100 -14.1 -4.38171 | opp_overlap 1381335 1381338, overlap 1381328 TCGCAATCTGATAAA CAAGGCGCTAT CCTG GTAGCGCCTTG TTTTCATCTGCTGTC TERM 1757 1381360 - 1381335 - T 95 -13.4 -3.92522 | opp_overlap 1381328 1381335, overlap 1381338 TCGCAATCTGATAAA CAAGGCGCTA TCCTGG TAGCGCCTTG TTTTCATCTGCTGTC TERM 1758 1381357 - 1381338 - T 79 -9.3 -4.08948 | opp_overlap 1381335 1381328, overlap 1381335 CAATCTGATAAACAA GGCGCTA TCCTGG TAGCGCC TTGTTTTCATCTGCT adhP 1382415 - 1381405 - | alcohol dehydrogenase TERM 1759 1381719 - 1381739 + g 79 -3.2 -5.14563 | gap 1, opp_overlap 1381719 CGACCGCGGTAACCA CCGCT-GCG TGCG CGCCACCGG TTTTTTCCTGCACAA TERM 1760 1382182 - 1382164 - G 85 -8.8 -4.37886 | opp_overlap 1382174 1382174, overlap 1382165 GCATCCTTCATAAAA CCACGCGA CAC TCGCGCGA TCGCCGGGTTTCAGC TERM 1761 1382472 - 1382498 + r 73 -9.6 -3.41936 | opp_overlap 1382472 1382469 1382467, overlap 1382470 TAGCAGGTAATAGCA GGTAATAGCA GGTAAGG TGCTATTACC TCTTTAGGATTAATA TERM 1762 1382712 - 1382687 - R 74 -11.1 -2.82317 | opp_overlap 1382684, overlap 1382684 TAAAGAAGAAAGTGA TATCCGGCGGC ATTC ACCGCCGGGTA CGTATTAAATGGAAG sfcA 1384450 - 1382717 - | malate dehydrogenase TERM 1763 1383434 - 1383421 - G 72 -2.3 -4.9218 | opp_overlap 1383426 GATCGACCATAAAAA CGTTC TGTC GAGCG GCATCTTCGCTTAAA TERM 1764 1384543 - 1384564 + r 90 -13.1 -3.65353 | opp_overlap 1384543, overlap 1384560 TCCTATAAACAAAAA CACCATTGC AGAT GCAATGGTG TTTAACGTCATTTCA TERM 1765 1384564 - 1384543 - R 100 -13.1 -5.38054 | opp_overlap 1384543 1384560 TCCTATAAACAAAAA CACCATTGC AGAT GCAATGGTG TTTAACGTCATTTCA rpsV 1384734 - 1384591 - | 30S ribosomal subunit S22 yddX 1385044 - 1384829 - | biofilm-dependent modulation protein osmC 1385556 - 1385987 + | osmotically inducible protein C TERM 1766 1385997 - 1386028 + T 77 -11 -3.15638 | gap 1 GCATGATAACCTCGC CAGCCCGGTA-ACGA CTC TTGTTTATCGGGCTG TTGAATATCGCTTTT hlyE 1387025 - 1386108 - | hemolysin E hdeB 1388562 - 1388891 + | acid-resistance protein TERM 1767 1388911 - 1388928 + F 75 -6.2 -4.53036 | opp_overlap 1388911 1388903, overlap 1388906 AAACTGATATCAAAA CCCGGC CTGTGT GTCGGG TTTTACTATTTGTGA TERM 1768 1389420 - 1389403 - g 95 -6.3 -5.31275 | gap 1, overlap 1389405 CCCGAGGAGAAAAAA CT-GTGGC ACA GCCACCAG TACGAGGTGAAATCC SPA1309 1389034 - 1389819 + | putative secreted protein TERM 1769 1391244 - 1391271 + G 100 -7 -5.77853 | CTGCTTTTTATGGGC GAAGAGTATGGC GAAA GCCGTCCTTTTC TTTTTTTTACCGATT SPA1310 1389948 - 1391732 + | putative hydrolase TERM 1770 1392033 - 1392022 - g 74 -7.2 -4.07885 | opp_overlap 1392031 CAGCTCGCTGGAAAA CGCC TGGT GGCG CGACGTGCTTGAATA TERM 1771 1392090 - 1392111 + G 77 -3.5 -5.00616 | overlap 1392094 ATTTCGATATTGACT GGTCGCGCC GACT GACGCTGCC TTTTTTAGGCGACAC TERM 1772 1392420 - 1392408 - g 83 -7.7 -4.66537 | opp_overlap 1392416 GGGTGGAAGATAAAA TCGTC TTC GACGA TACACATCGGCTGAT TERM 1773 1392588 - 1392570 - g 80 -4.5 -5.02074 | opp_overlap 1392570, overlap 1392572 TCACCGTGGAAAAAA TTCTCGC TAAAG GCGAGCA ACTTCCTGATGACTG SPA1311 1391729 - 1394257 + | putative hydrolase SPA1312 1394314 - 1396389 + | putative glycogen debranching protein TERM 1774 1396431 - 1396415 - T 73 -10.8 -3.05384 | opp_overlap 1396415 GCGCTCCGGACCCAA CCGGCC TTGAT GGCCGG TTTTTTTACTGGCGC TERM 1775 1396415 - 1396431 + T 100 -10.8 -5.52384 | opp_overlap 1396415 GCGCTCCGGACCCAA CCGGCC TTGAT GGCCGG TTTTTTTACTGGCGC SPA1313 1397705 - 1396503 - | putative aminotransferase TERM 1776 1397579 - 1397556 - G 76 -11.8 -3.05596 | gap 1 GATTCGCTGATGCAA TG-CCGCCTGA ACC TCAGGCGGGCA GGCAAAATCGAAATC TERM 1777 1398468 - 1398493 + r 73 -11.1 -2.53345 | gap 1, overlap 1398467 1398465 1398461 TGATGTCCGTAACGC GCTGCGGCGTGG CCA CCTCGCC-CAGC ATATTACTGTGTCCG SPA1315 1401087 - 1400194 - | hypothetical protein TERM 1778 1400236 - 1400250 + g 76 -2.8 -5.0538 | opp_overlap 1400236 AGGGAAGGGATCAAA CTTATG GGC CAGAAG TTTTTTGACATGCAC TERM 1779 1400930 - 1400900 - G 74 -7.8 -4.08216 | opp_overlap 1400900, overlap 1400888 GTACTGTCGTTAAAA CAGATTACATCA CCTTCTT TGATATAATCTG TTACTTTACTAAAGT TERM 1780 1401247 - 1401268 + r 73 -2.1 -5.19998 | TACCGATATTAAGCT GGACGATCG GATT TGACCGCCC TTTTCTTTTGCTTAT SPA1316 1401510 - 1401280 - | putative regulatory protein TERM 1781 1402229 - 1402243 + G 73 -5.7 -4.45517 | GCTCTGTGCACCCGT TGGCA AAAGA TGCCA TTTTGTCGCTCATTT TERM 1782 1402449 - 1402438 - g 77 -7.2 -4.3208 | opp_overlap 1402438, overlap 1402439 CTGGAGAAGTTAAAA CGCG TCAG CGCG GATGCTAAAGCGATT hyaA2 1402003 - 1403106 + | uptake hydrogenase small subunit TERM 1783 1403925 - 1403907 - gf 72 -3.8 -4.68593 | TCCATCATCCAAAAA GCTCGC CAGTTCT GCGAAC AAGTTTATCTTCCGG hyaB2 1403109 - 1404911 + | hydrogenase-1 large subunit TERM 1784 1405245 - 1405265 + GF 100 -7.6 -5.14563 | CTGGCGCAAAGGCGT TATCAGCG AAATC CGCTGGTA TTTTTTCCTCGAAAA hyaC2 1404862 - 1405605 + | Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC2 hyaD2 1405611 - 1406219 + | hydrogenase 1 maturation protease hyaE2 1406522 - 1406932 + | hydrogenase-1 operon protein HyaE2 hyaF2 1406950 - 1408011 + | hydrogenase-1 operon protein HyaF2 SPA1324 1407999 - 1408886 + | putative ATP/GTP-binding protein SPA1325 1408899 - 1409240 + | putative hydrogenase TERM 1785 1409279 - 1409263 - T 100 -10.1 -5.49234 | ATAGTCAATAAAAAA GGACGCC AGA AGCGTCC TGAAATAATAAAAGA SPA1326 1410499 - 1409381 - | putative outer membrane protein TERM 1786 1409433 - 1409446 + g 70 -6.7 -4.11751 | TCTGTATTAGGATTC GATGG GTTG CCATC TTTTAGCAGATTGAT TERM 1787 1411149 - 1411159 + H 74 -6.8 -4.3467 | overlap 1411146 TTTTTTATTGTTCGT GAGC CAT GCTC TTTTAGTATAAAGGT SPA1327 1411216 - 1411758 + | hypothetical protein SPA1328 1412761 - 1411814 - | hypothetical protein yneG 1413337 - 1412978 - | hypothetical protein TERM 1788 1413303 - 1413282 - G 86 -10.1 -4.3467 | overlap 1413293 ATCCCGAGACGAAAA CGCGAACGA AATG TCGATCGCG CCAGGCGGGCAAAGA yneH 1414251 - 1413337 - | glutaminase yneI 1415724 - 1414336 - | putative aldehyde-dehydrogenase yneJ 1415827 - 1416699 + | putative regulatory protein TERM 1789 1417311 - 1417321 + G 74 -2.4 -5.0538 | GTCAGTATTTTGGCT GGCG CAC CACC TTTTTTGCCATCGGC ydeA 1416815 - 1418005 + | sugar efflux transporter TERM 1790 1418047 - 1418006 - T 77 -10.9 -3.20367 | opp_overlap 1418006 1418018, overlap 1418008 1418010 GAACAACCGCATTAA GACATTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAAAATG CGCCTTAGTGGTACG TERM 1791 1418045 - 1418008 - T 83 -13.5 -3.15841 | opp_overlap 1418006 1418018, overlap 1418006 1418010 ACAACCGCATTAAGA CATTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAAAA TGCGCCTTAGTGGTA TERM 1792 1418043 - 1418010 - T 100 -18.3 -3.13639 | opp_overlap 1418006 1418018, overlap 1418008 1418006 AACCGCATTAAGACA TTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAA AATGCGCCTTAGTGG marC 1418717 - 1418052 - | multiple drug resistance protein MarC marR 1418976 - 1419410 + | DNA-binding transcriptional repressor MarR marA 1419430 - 1419813 + | DNA-binding transcriptional activator MarA marB 1419842 - 1419952 + | multiple antibiotic resistance protein MarB TERM 1793 1420047 - 1420059 + G 79 -3.3 -5.24129 | TCGACCAATGATGAC GACCG GCA CCGTC TTTTTTATCGCCGGG ydeE 1419946 - 1420401 + | hypothetical protein SPA1339 1420622 - 1420744 + | hypothetical protein TERM 1794 1420770 - 1420804 + T 100 -16.5 -4.55287 | gap 1, opp_overlap 1420759 1420758, overlap 1420771 TAATCCCTCGCAGAG CCGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCGC TTTTGTCTGGATGGC TERM 1795 1420771 - 1420803 + T 100 -20 -3.3269 | gap 1, opp_overlap 1420759 1420758, overlap 1420770 AATCCCTCGCAGAGC CGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCG CTTTTGTCTGGATGG TERM 1796 1420850 - 1420833 - T 100 -10.5 -6.11644 | opp_overlap 1420840 GCAGGCAAAAAAAAA CCGCCGG TTCA CCAGCGG TAAATGCTTGCATGG ydeI 1421485 - 1421093 - | hypothetical protein TERM 1797 1421383 - 1421404 + g 85 -2.1 -5.52384 | opp_overlap 1421367, overlap 1421389 CATCCTCAATAGCAT GAGGCGGCG GCGG TGCCACGTC TTTTTTTAATCCCCC ydeJ 1421912 - 1422439 + | competence damage-inducible protein A TERM 1798 1422491 - 1422509 + T 71 -10.2 -2.69977 | opp_overlap 1422491, overlap 1422488 GTCAGAATAAAAAAA TGCGAGCC TAT GGCCCGCA TCGTATGTGCAATAT TERM 1799 1422509 - 1422491 - T 100 -12.4 -5.88565 | opp_overlap 1422491 1422488 GTCAGAATAAAAAAA TGCGAGCC TAT GGCCCGCA TCGTATGTGCAATAT SPA1342 1422741 - 1422559 - | hypothetical protein TERM 1800 1422585 - 1422603 + g 82 -5.2 -5.03145 | overlap 1422578 1422580 1422586 ATTTCCGTCCGCCAC TGTGGCTA TTC TGGCCACC TTTTTTACCCGCTTC dcp 1425128 - 1423086 - | dipeptidyl carboxypeptidase II TERM 1801 1424959 - 1424909 - G 90 -4.7 -5.42259 | TCATCGCGAAAAAAA CGCTGGTGACGCGTGA-CAGAAGCG CCC CGCTT-TGCTCCAGCGCCAGAAGCG TATTCGTAAAGTCAG ydfG 1425267 - 1426013 + | 3-hydroxy acid dehydrogenase ydfH 1426142 - 1426828 + | putative regulatory protein ydfZ 1427009 - 1427212 + | hypothetical protein TERM 1802 1427243 - 1427269 + T 73 -10.8 -3.10901 | opp_overlap 1427233, overlap 1427241 1427245 AGAACCGCTCCGGCC TTCCCGGTAGCA TAA TGCTACCGGGTC TCTGTTACGCTATTT TERM 1803 1427245 - 1427267 + T 100 -17.8 -3.10513 | opp_overlap 1427233, overlap 1427243 1427241 AACCGCTCCGGCCTT CCCGGTAGCA TAA TGCTACCGGG TCTCTGTTACGCTAT ydfI 1428745 - 1427279 - | putative mannitol dehydrogenase TERM 1804 1428885 - 1428831 - R 78 -5.2 -4.9448 | gap 3, overlap 1428843 1428845 1428847 ACTGATTAAACAAAA GTGACCGGACAACATAGCCGAAACCGC ATTA GCG-TTCCGGCCATACCGTC-GA-CAC GATTTAACTCGTCTG ydfJ 1430268 - 1428889 - | putative membrane transport protein TERM 1805 1430088 - 1430047 - G 72 -2.1 -4.91852 | opp_overlap 1430050, overlap 1430073 1430083 TTTACCAAAAACAAA GGCGCCGATAATTCTGGCT ATAT AACCTGCACCATAGGTGCC CATTGCCAGAATAAG rspB 1431341 - 1430322 - | putative dehydrogenase rspA 1432566 - 1431352 - | starvation sensing protein RspA TERM 1806 1431974 - 1431956 - G 74 -6.6 -4.26344 | overlap 1431961 1431965 AGATGTTCATTAAAA CCGAACGT ATT ACGCACGG CGTCAAACAGCTTTG TERM 1807 1432034 - 1432044 + g 81 -8.2 -4.3739 | overlap 1432032 CACAATTGTTCTTCC GGCC ACT GGCC TTTTGTCGCGGGCTC TERM 1808 1432680 - 1432648 - R 84 -8.3 -4.67755 | opp_overlap 1432675 ATATTGATGTAAAAA GCGCTGCCAGATCAC AAA ATGTTCTGGTTGCGC GGCAATGTTACGTAC ynfA 1433014 - 1432688 - | hypothetical protein ynfB 1433167 - 1433508 + | hypothetical protein TERM 1809 1433736 - 1433694 - g 76 -9.4 -3.96624 | overlap 1433715 GATCTCTACGACAAA CACATCC-ACGACCAAAGCG AACGG CGCTTTG-TCGTCGAATGCG ATGGTGAAAACGCCG TERM 1810 1433855 - 1433835 - g 77 -8.1 -4.21908 | GAGTACCAGGGAAAA GGCCTGGCG TCA CGCGCGGCC AAACTGGCGATGGAT speG 1433544 - 1434104 + | spermidine N1-acetyltransferase TERM 1811 1434118 - 1434091 - T 71 -10.5 -2.72144 | opp_overlap 1434106, overlap 1434090 1434105 CTACGCTCCTGAAAC CCACCGCGCAG TAAGCC CGGCGCGGTAG TCACGGAGAGTCGCA TERM 1812 1434106 - 1434143 + T 79 -9.8 -3.80573 | gap 1, opp_overlap 1434091 1434090 1434105 CCACCGCGCAGTAAG CCCGGCGCGGTAGTCAC GGAGA GTCGC-ACCGCGCCCGG TTTAGTAGTAATCGA ynfC 1434855 - 1434145 - | hypothetical protein ynfD 1434962 - 1435267 + | putative outer membrane protein TERM 1813 1435887 - 1435872 - g 84 -3.2 -5.42259 | opp_overlap 1435885, overlap 1435873 CCAGCCTGAAAAAAA TCGTAG AGAC CTACGG CAATGAAGCCGTCTA TERM 1814 1437708 - 1437680 - g 74 -7.3 -4.08767 | CTCATTCCGGCAAAA GTCACGCCGCGCA TAT TGCCTGGCGTCAC CGCTATCGGCCAGGG SPA1356 1435424 - 1437862 + | putative anaerobic dimethyl sulfoxide reductase chain A dmsB 1437873 - 1438490 + | anaerobic dimethyl sulfoxide reductase chain B TERM 1815 1438623 - 1438635 + G 95 -5.5 -5.38047 | overlap 1438614 1438614 CGCCCGTCAGCGCAT CGTGC GCA GCATG TTTTTTCTGTGGCTG SPA1358 1438492 - 1439349 + | putative dimethyl sulphoxide reductase subunit TERM 1816 1439356 - 1439375 + F 72 -9.2 -3.6512 | opp_overlap 1439354, overlap 1439357 1439367 1439368 GCAGGTTAATTTATG CGTGCGGG GCGA CCCGCACC TTTCGGGATTGTTTG TERM 1817 1439357 - 1439374 + F 79 -12.7 -2.78349 | opp_overlap 1439354, overlap 1439356 1439367 1439368 CAGGTTAATTTATGC GTGCGGG GCGA CCCGCAC CTTTCGGGATTGTTT TERM 1818 1439429 - 1439451 + G 72 -2.6 -4.89477 | overlap 1439432 ATGATTTTGCAGTAA CGGCGCGT GTTCTTG GCGCGTTG TTTTATTATTCGCCG ynfI 1439392 - 1440006 + | twin-argninine leader-binding protein DmsD TERM 1819 1440018 - 1440035 + F 81 -8.4 -4.43859 | opp_overlap 1440018 TTAATCCCCACAAAA GGCAGG ATTTTA CCTGCC TTTTCTCCCATTGTG TERM 1820 1440035 - 1440018 - f 81 -8.4 -4.4017 | opp_overlap 1440018 TTAATCCCCACAAAA GGCAGG ATTTTA CCTGCC TTTTCTCCCATTGTG TERM 1821 1440188 - 1440166 - f 80 -12.2 -3.07501 | overlap 1440168 ACATAATTGTTAATA GATGTTTAAC AGT GTTAAACATC ACGCTCCGCTGGAAT TERM 1822 1440495 - 1440506 + G 71 -5.8 -4.2558 | CTTTACTGGTCGGTA TCCC GAGT GGGA TTTTACTCAGCCGTC SPA1360 1440311 - 1441021 + | putative ABC transporter membrane protein TERM 1823 1441493 - 1441463 - g 83 -9.8 -4.11216 | overlap 1441465 1441468 CGCCGAGTCGGAAAA TATCACCACCATCT CGC AGATGGTGGCAAAA ATCGAACAAGTCCGG TERM 1824 1441491 - 1441465 - g 83 -12.4 -3.65542 | overlap 1441463 1441468 CCGAGTCGGAAAATA TCACCACCATCT CGC AGATGGTGGCAA AAATCGAACAAGTCC TERM 1825 1441488 - 1441468 - g 86 -14.1 -2.93891 | overlap 1441465 1441463 AGTCGGAAAATATCA CCACCATCT CGC AGATGGTGG CAAAAATCGAACAAG SPA1361 1441050 - 1441952 + | putative ABC transporter periplasmic binding protein TERM 1826 1442221 - 1442235 + G 86 -7 -5.03405 | overlap 1442223 GTATTGGCGTTCTGC CCGCCG TGA CGGCCG TTTTTCTCTACTCTT SPA1362 1441962 - 1442609 + | putative ABC transporter membrane protein TERM 1827 1442964 - 1442945 - g 82 -11.4 -3.85698 | TTGGGTTGGGACAAA GCGCGCTG CAAG CAACGCGC CGAAGAATTGATGGA TERM 1828 1443247 - 1443227 - g 80 -8.9 -4.15106 | opp_overlap 1443229 GACGAAGCGCTAAAA CTCGGCGAC CGT ATCGCCGTG TTCCGTCAGGGGCGA SPA1363 1442609 - 1443757 + | putative ABC transporter ATP/GTP-binding protein TERM 1829 1443755 - 1443799 + T 73 -10 -3.31248 | opp_overlap 1443750 1443758, overlap 1443758 1443763 1443798 ATTCACGAAAGCAGC TAACGTTGCCGCCGGATGGC CTCTC GCTATCCGGCAGTATCATTA TTGTACGCAATATTA TERM 1830 1443763 - 1443791 + T 80 -12.4 -3.04443 | opp_overlap 1443750 1443758, overlap 1443758 1443755 AAGCAGCTAACGTTG CCGCCGGATGGC CTCTC GCTATCCGGCAG TATCATTATTGTACG TERM 1831 1443819 - 1443829 + T 74 -6.8 -4.2349 | ACGCAATATTATATC GCAC ATA GTGC TTTTGCGTCTGACGC TERM 1832 1444107 - 1444119 + T 72 -10.5 -2.77862 | overlap 1444104 1444102 1444112 TTACGCCGGCGCTTG GCGGC CTG GCCGC TGGTCTGTTGCTGTG TERM 1833 1444640 - 1444667 + T 74 -7 -4.20918 | CTGTGCGGCCCGTTG CTGATGTGGCTG ATGA CAGCCATAATAG TTTCTTACGCTTAAA TERM 1834 1444861 - 1444841 - T 71 -6.8 -4.07568 | TTTTTGCGTGCAAAA TCCTGGCG GTGCT CGCCAGCA GCGGGTCTGGCGCGC TERM 1835 1445093 - 1445063 - T 75 -9.7 -3.56092 | opp_overlap 1445066, overlap 1445064 1445066 TGATGATTTGTGAAA TGACCGGCGAGTA TCAGT TACTCCCCGGTCT GCTGATTGCCTGTGT TERM 1836 1445092 - 1445064 - T 81 -13.2 -2.73441 | opp_overlap 1445066, overlap 1445063 1445066 GATGATTTGTGAAAT GACCGGCGAGTA TCAGT TACTCCCCGGTC TGCTGATTGCCTGTG bioD 1445829 - 1445134 - | putative dithiobiotin synthetase mlc 1447175 - 1445955 - | putative regulatory protein TERM 1837 1446948 - 1446977 + g 77 -8.5 -4.08317 | gap 1, overlap 1446951 TTCCACCATCAGCCC GACGGCGGGACGTC CAC GACTGCCCGCC-TC TTTAATTTCAAGTTC TERM 1838 1446951 - 1446975 + g 79 -11.3 -3.62756 | overlap 1446948 CACCATCAGCCCGAC GGCGGGACGTC CAC GACTGCCCGCC TCTTTAATTTCAAGT ynfL 1448202 - 1447303 - | putative regulatory protein TERM 1839 1447636 - 1447618 - G 83 -7.4 -4.66163 | opp_overlap 1447634 ATGCGGATCGAAAAA GACGAAAG GTT CTTCCGCC AGTTCTGTCAGACTG TERM 1840 1447879 - 1447867 - G 71 -6.3 -4.28254 | GCGGAACAGCGAAAA GGTAT GCG ATACC GCCCGAATAAAAGGC TERM 1841 1447937 - 1447969 + g 100 -17.7 -3.54424 | overlap 1447938 TCTCCCGCTTCGCCC TGATGCAGCCGCTCG GCG CGAGCGGCGGCGTCG TTTACCAGACTCAGG TERM 1842 1447938 - 1447968 + g 100 -19 -2.72511 | overlap 1447937 CTCCCGCTTCGCCCT GATGCAGCCGCTCG GCG CGAGCGGCGGCGTC GTTTACCAGACTCAG ynfM 1448322 - 1449575 + | putative membrane transport protein TERM 1843 1449619 - 1449583 - f 89 -9.4 -4.65263 | opp_overlap 1449582 1449585, overlap 1449586 1449587 ACGCCTGAAAAGAAA TAATCCGGCGATAGCA ACGTG CGCTATCGCCGGGCTG GTTTCACGCCACGAC TERM 1844 1449585 - 1449617 + F 74 -11.3 -2.90496 | opp_overlap 1449583 1449586 1449587, overlap 1449582 GCCTGAAAAGAAATA ATCCGGCGATAGC AACGTGC GCTATCGCCGGGC TGGTTTCACGCCACG TERM 1845 1449616 - 1449586 - f 100 -13.3 -4.43397 | opp_overlap 1449585 1449582, overlap 1449583 1449587 CCTGAAAAGAAATAA TCCGGCGATAGCA ACGTG CGCTATCGCCGGG CTGGTTTCACGCCAC TERM 1846 1449615 - 1449587 - f 100 -16.8 -3.24954 | opp_overlap 1449585 1449582, overlap 1449586 1449583 CTGAAAAGAAATAAT CCGGCGATAGCA ACGTG CGCTATCGCCGG GCTGGTTTCACGCCA asr 1449970 - 1450221 + | acid shock protein precursor TERM 1847 1450225 - 1450199 - f 84 -8.1 -4.63184 | gap 1 AATCTACGTCAAAAA CAACTT-CGCAG CCGG CTGCGTAAGTCG TAACATGCTGCGGCG TERM 1848 1450236 - 1450254 + F 84 -8.1 -4.57569 | gap 1, opp_overlap 1450231, overlap 1450236 1450237 1450248 AGTCGTAACATGCTG C-GGCGCG CCCC CGCGCCCG TTTTTACGGCGCTAA TERM 1849 1450237 - 1450252 + F 76 -11.8 -2.60211 | opp_overlap 1450231, overlap 1450236 1450236 1450248 GTCGTAACATGCTGC GGCGCG CCCC CGCGCC CGTTTTTACGGCGCT SPA1370 1450490 - 1451311 + | putative secreted protein TERM 1850 1451352 - 1451312 - T 74 -10.4 -3.21099 | opp_overlap 1451320 CTGGCGCAGGATTAA TGCGGGAATCGCTGCCTG ACCGG CAGGCAGCGATCGTCTCA GGCAAATTTGATCAT TERM 1851 1451320 - 1451344 + T 90 -15.8 -2.62263 | opp_overlap 1451312 GGATTAATGCGGGAA TCGCTGCCTG ACCGG CAGGCAGCGA TCGTCTCAGGCAAAT ydgF 1452027 - 1451665 - | multidrug efflux system protein MdtJ SPA1373 1452309 - 1452139 - | hypothetical protein tqsA 1452444 - 1453478 + | putative transport protein TERM 1852 1453636 - 1453619 - T 100 -12.7 -4.87786 | TGAAGTTTATAAAAA CGGCCTC CGAA GAGGCCG CCGCACGTTTAAAAG pntB 1455041 - 1453653 - | pyridine nucleotide transhydrogenase TERM 1853 1454032 - 1454045 + g 72 -3.7 -4.72386 | opp_overlap 1454020 AAACGCACGTTGATC CCGCG CGCA CGCAG TTTTTCGGTGATTTC pntA 1456581 - 1455052 - | NAD(P) transhydrogenase subunit alpha TERM 1854 1456077 - 1456112 + g 71 -9.7 -3.55444 | gap 1, opp_overlap 1456074, overlap 1456083 CCGCGCCAATCACCA TCACCTTCGCCGGCGG CACTT TC-CCGGCGGCGGTGA TTTGGCCGGTAAAGA TERM 1855 1457308 - 1457294 - g 71 -7.8 -4.03234 | opp_overlap 1457294 CGCCGCGCAGATAAA GAAGGC GCA GCCTCC TTCTATGTTGTCGAC TERM 1856 1457650 - 1457633 - g 70 -7 -4.09117 | opp_overlap 1457649, overlap 1457646 1457649 TTTATCTATAAACAA GATGCG AAAAAA CGCATC GTCCAGAGCCCGGAC ydgH 1457108 - 1458052 + | hypothetical protein TERM 1857 1459047 - 1459032 - g 75 -3.9 -4.89063 | CGAGCGAAAAATAAA CGCGA TGTAGG CCGCG CCACGCTACTGGCAG ydgI 1458351 - 1459733 + | putative amino acid permease TERM 1858 1459776 - 1459737 - T 78 -12.4 -2.70932 | CTGGTGGGTTAACCA CCTCCCCATCGTAATA TCCGTCTG TATTACGATGGGGAAA CCACGGTCTTTGCCA ydgC 1460130 - 1459795 - | hypothetical protein rstA 1460256 - 1460987 + | DNA-binding transcriptional regulator RstA TERM 1859 1461047 - 1461027 - f 70 -9 -3.43676 | opp_overlap 1461026 TTTATCAAGTCATAA TGGCGATG CTCAT CACCGCCA CTGTTCAAAAAACAA ompN 1461466 - 1462617 + | outer membrane protein TERM 1860 1462634 - 1462662 + F 100 -8.7 -5.7946 | overlap 1462639 TATTCATTAATTCTT CTCAAGCCCGCCG TTT CGGCGGGCTTTTC TTTTTTTATTACCAC TERM 1861 1462639 - 1462657 + F 100 -17.4 -5.64328 | overlap 1462634 ATTAATTCTTCTCAA GCCCGCCG TTT CGGCGGGC TTTTCTTTTTTTATT SPA1383 1462771 - 1464477 + | hypothetical protein TERM 1862 1464531 - 1464511 - f 77 -11.1 -3.28791 | opp_overlap 1464512, overlap 1464515 AGCCTGCTTTTATAA CCCACCAGC GGC GCTGACGGG AAATCTTTTCCGTCA TERM 1863 1464557 - 1464515 - f 81 -13.5 -2.59431 | gap 1, opp_overlap 1464512, overlap 1464511 TGCTTTTATAACCCA CCAGCG-GCGCTGACGGGAA ATCT TTTCCGTCAGCGCGCGATAG AGCTAATGTATTGAG rstB 1464585 - 1465889 + | sensor protein RstB TERM 1864 1466170 - 1466191 + G 71 -4.4 -4.67607 | opp_overlap 1466160 1466159 AAGAGGCCGAAGCGC TGGCGCTA CGTCAC TATCGCCA TTTGTTTATTCAACA TERM 1865 1466561 - 1466542 - g 100 -7 -5.44119 | overlap 1466543 1466544 GCCAGTTGAAAAAAA GCCTCGCG TCGC CGCGCAGC GTCCCGCCGTGGACG TERM 1866 1466858 - 1466838 - g 71 -11.1 -2.90813 | opp_overlap 1466838 1466837 1466840, overlap 1466835 1466840 CACCGTTTTAAACCA CAGGCGCAG CCG CTGCGACTG ATTATTCCGCGACTG tus 1465965 - 1466894 + | DNA replication terminus site-binding protein fumC 1468294 - 1466891 - | fumarate hydratase TERM 1867 1466977 - 1467001 + g 77 -8.5 -4.07535 | overlap 1466973 1466978 GGTATCCTAATGCCA CGGCTGAGGCT TTG AGCGTCAGCCC TTCTTTATGCGCCTT TERM 1868 1466978 - 1467000 + g 76 -12 -3.03798 | overlap 1466973 1466977 GTATCCTAATGCCAC GGCTGAGGCT TTG AGCGTCAGCC CTTCTTTATGCGCCT TERM 1869 1467372 - 1467423 + g 77 -7.8 -4.25104 | gap 1, opp_overlap 1467371 1467370 TCCGGGATAGCAATC TCGCCAATGCCGCAGCGCGGGCCGG ACG CCAGCCAGCGAA-CATCATTGGCGA TTTTCATCAGCGAGG TERM 1870 1468461 - 1468436 - R 74 -11.1 -2.81509 | opp_overlap 1468436, overlap 1468433 1468428 CAAAATAGCGAATCA TGTTACCGCCC CGCA GGGCGGCGACA TTACTTAACGCAGCG TERM 1871 1468436 - 1468461 + r 79 -11.1 -3.33696 | opp_overlap 1468436 1468433 1468428 CAAAATAGCGAATCA TGTTACCGCCC CGCA GGGCGGCGACA TTACTTAACGCAGCG fumA 1470108 - 1468462 - | fumarate hydratase class I, aerobic TERM 1872 1469850 - 1469863 + g 70 -6.7 -4.1899 | GCAGGAATTGCAGCG CGACA TATT TGTCG TTTTCACTGGCCTGC TERM 1873 1470527 - 1470507 - g 80 -4.5 -5.093 | opp_overlap 1470525, overlap 1470508 TCGAAAAGAATAAAA CCGCCATGC TGG GCGAAGCGG TAGCCAACCGTTTCG TERM 1874 1470541 - 1470553 + G 74 -6.9 -4.33928 | GGTAGCCAACCGTTT CGGCG AAC TGCCG TTTCTGTTTAAAGTA manA 1470308 - 1471483 + | mannose-6-phosphate isomerase TERM 1875 1471541 - 1471562 + F 100 -13 -4.38116 | overlap 1471538 AGACGTAAAACTCCT CCAGGCGG TTTAAT CCGCCTGG TTTCATTTTTATGGA ydgA 1471586 - 1473094 + | hypothetical protein TERM 1876 1474311 - 1474287 - T 78 -6.5 -4.64844 | gap 1 CGCACAGAGAGAAAA TCACCGCGCT GGATTT AGC-CGGTGA TGAGCTGGGCTTTCC TERM 1877 1474869 - 1474822 - T 81 -12.8 -3.2794 | gap 1 CTTTATTGACACTAA CGCTCTTCTCCGCCTGCGGTT TAATGCT ATCC-CAGGCGGAGAAATGCG ACATCTCAGGCAAGA ydgJ 1475915 - 1474875 - | putative oxidoreductase TERM 1878 1475544 - 1475530 - G 82 -5.6 -5.03314 | opp_overlap 1475531, overlap 1475531 TTCAGCGTCAAAAAA TCGCTG TCC CAGCGT CGGTTGTGGAAGACG TERM 1879 1476402 - 1476423 + H 73 -11.5 -2.61695 | overlap 1476401 1476399 CGTTAACCTTTCGCC CCAGGCGCC ATGT GGCGCCTGA CTCTTTACCGGTAAG TERM 1880 1476455 - 1476482 + H 79 -2.6 -5.3472 | overlap 1476456 ATATTCCCTTTTTAC CTGCACCCCTGA CCTC TCACTGGTGCAA TTTTGTTTATTTTTT ydgT 1476547 - 1476762 + | oriC-binding nucleoid-associated protein ydgK 1476851 - 1477291 + | hypothetical protein TERM 1881 1477785 - 1477796 + G 79 -7.2 -4.46615 | overlap 1477783 CTATACGGATTTTCC GCCG CCGT CGGC TTTTCATTAGTGATG TERM 1882 1477845 - 1477864 + G 71 -6.3 -4.30576 | overlap 1477847 CGCGAACGCCTTGCC GTGGCGG ATGTGC CCGCCCC TTTTCGTGGTAACGC SPA1394 1477368 - 1477949 + | Na(+)-translocating NADH-quinone reductase subunit E ydgM 1477949 - 1478527 + | electron transport complex protein RnfB TERM 1883 1478616 - 1478645 + G 77 -7.7 -4.37211 | opp_overlap 1478609 1478610, overlap 1478610 1478617 CAGTCAAACGGCACG CCGCTGCGCCAGG TGCC TTTGGCGCCGCGC TTTGTTATCCCTTTA TERM 1884 1478617 - 1478644 + G 74 -11.2 -3.21242 | opp_overlap 1478609 1478610, overlap 1478610 1478616 AGTCAAACGGCACGC CGCTGCGCCAGG TGCC TTTGGCGCCGCG CTTTGTTATCCCTTT TERM 1885 1478679 - 1478664 - g 70 -6.8 -4.08767 | GTTATCCCTTTAAAA CAGCAC ATTG GCGCTG AGGGCGAGCTGTGCG TERM 1886 1479895 - 1479873 - g 76 -3.2 -5.06816 | AGGCTTGAAGAAAAA CGCGCCGCCG AAG CCAAAGCGCG TTTTGAGGCTCGTCA TERM 1887 1480707 - 1480695 - g 93 -4.7 -5.47218 | GTTCAGGCAAAAAAA GCAGC ACA GCAGC AGGTTGTTAACGAGG SPA1396 1478520 - 1480727 + | electron transport complex protein RnfC TERM 1888 1480825 - 1480838 + G 90 -5.9 -5.26875 | overlap 1480808 CTCTGCCGGGGATTG CCGCG CAGA CGTGG TTTTTTGGTTGGGGA TERM 1889 1481454 - 1481442 - g 71 -4.8 -4.56597 | CTGCTGTGGCAAAAA GCCA TCCGC TGGC ATATCCCGGTCAGTT TERM 1890 1481479 - 1481498 + G 74 -11.4 -3.2352 | gap 1, overlap 1481474 TCAGTTTTCTGCTCA CGCTGGCGC TAT GCGCC-GCG TTAGGTTGGCTTTTC rnfD 1480728 - 1481786 + | electron transport complex protein RnfD ydgP 1481790 - 1482410 + | electron transport complex protein RnfG TERM 1891 1483088 - 1483049 - g 100 -12.1 -4.54301 | gap 1, overlap 1483051 GAAAAAATGAAGAAA CGCCGCGCCGAAACCGCG CCTTC CGCTGTTCCGGC-CGGTG AAACAGGGAAAGTCT TERM 1892 1483086 - 1483051 - g 78 -13.3 -2.55644 | gap 1, overlap 1483049 AAAAATGAAGAAACG CCGCGCCGAAACCGCG CCTTC CGCTGTTCCGGC-CGG TGAAACAGGGAAAGT ydgQ 1482413 - 1483105 + | SoxR-reducing system protein RsxE TERM 1893 1483163 - 1483121 - g 77 -4.1 -5.09521 | gap 1, overlap 1483130 TGAACAAAGCAAAAA GGCTGGAAATT-CTGACGCG CCTG CGCGACAGCAATCCGCACCC CACAACGGAACTCAA nth 1483105 - 1483740 + | endonuclease III TERM 1894 1484383 - 1484363 - g 91 -4 -5.64421 | opp_overlap 1484367 1484373, overlap 1484367 1484368 1484374 ACTGCAAACAAAAAA CCAACTGA AAGCG TCAGTTTG AACGCTTTCAAACAA TERM 1895 1484394 - 1484367 - g 77 -8.6 -4.07772 | gap 1, opp_overlap 1484367 1484373 1484383 1484386, overlap 1484363 1484368 1484374 CAAACAAAAAACCAA CTGAAAGCG-TCA GTT TGAACGCTTTCAA ACAACCGAAGGCGTT tppB 1484342 - 1485847 + | putative tripeptide transporter permease TERM 1896 1485835 - 1485824 - f 74 -5.8 -4.59109 | GATACCGCTGAAAAA GGCT CTAA AGCC GCTACAGTTTAATTT TERM 1897 1485870 - 1485892 + F 100 -13.5 -6.17184 | opp_overlap 1485866 GGAAACAACATTCAG GCCGCTAAC TGTGC GTTAGCGGC TTTTTTTTTGCTCGT gst 1485952 - 1486557 + | glutathionine S-transferase pdxY 1487476 - 1486616 - | pyridoxamine kinase TERM 1898 1487524 - 1487499 - R 80 -6.1 -4.87626 | opp_overlap 1487500 1487502, overlap 1487502 CCTGAACATCAAAAA TAAGGGAGTGA TTTC TCACTCCCTGT TACTTAATGCCTTAT TERM 1899 1487500 - 1487523 + r 73 -9.6 -3.41581 | opp_overlap 1487499 1487502, overlap 1487502 CTGAACATCAAAAAT AAGGGAGTGA TTTC TCACTCCCTG TTACTTAATGCCTTA TERM 1900 1487521 - 1487502 - R 100 -12.2 -4.53398 | opp_overlap 1487502 1487500, overlap 1487499 GAACATCAAAAATAA GGGAGTGA TTTC TCACTCCC TGTTACTTAATGCCT TERM 1901 1487502 - 1487521 + r 81 -12.2 -3.27297 | opp_overlap 1487499 1487502, overlap 1487500 GAACATCAAAAATAA GGGAGTGA TTTC TCACTCCC TGTTACTTAATGCCT tyrS 1488810 - 1487536 - | tyrosyl-tRNA synthetase TERM 1902 1487713 - 1487745 + g 72 -4 -4.81249 | overlap 1487724 TGACGGCTGGAGTTC GGCGTCTACCAG CGCCTGCAT CAGGTCGGCGCC TTTTTCCATTTCAAC TERM 1903 1487920 - 1487935 + g 81 -3.9 -5.21506 | overlap 1487915 1487919 TACATACTGCGCGCG CGGCG CTTTAC CGCTG TTTTTATCTTCTTCT TERM 1904 1488226 - 1488246 + g 74 -7.5 -4.15044 | GTCAGAACCGCCAAT CTGTAAGGC AAC GCCGTGCAG TTTATTCAGACAAGC pdxH 1489593 - 1488937 - | pyridoxamine 5'-phosphate oxidase ydhA 1489981 - 1489652 - | lysozyme inhibitor anmK 1491190 - 1490069 - | anhydro-N-acetylmuramic acid kinase TERM 1905 1491007 - 1490977 - G 75 -6.1 -4.56597 | gap 1, overlap 1490962 1490978 1490979 CCGCCTGTGCAAAAA GCCGGCCTAACTGG GTAT CCAGCT-GGCCGAG TTGCGAGAGCGTAAG TERM 1906 1491006 - 1490978 - G 70 -9.6 -3.33744 | gap 1, overlap 1490962 1490977 1490979 CGCCTGTGCAAAAAG CCGGCCTAACTGG GTAT CCAGCT-GGCCGA GTTGCGAGAGCGTAA slyB 1491462 - 1491929 + | outer membrane lipoprotein SlyB precursor slyA 1492411 - 1491977 - | transcriptional regulator SlyA ydhI 1492612 - 1492848 + | hypothetical protein TERM 1907 1493330 - 1493318 - gf 70 -10.5 -2.55282 | opp_overlap 1493328, overlap 1493317 1493316 AACGGAAGTAAAAGC GCCGG TAT CCGGC TGGGTGACCAACCTT TERM 1908 1493613 - 1493589 - gf 83 -10.7 -3.83026 | GTGCCCGATATCAAA CCCAACGTACC GTG GGTACGTCTGG CGCAACGCGTACCGG ydhJ 1492815 - 1493711 + | putative HlyD-family protein TERM 1909 1495027 - 1495037 + G 76 -5.4 -4.77757 | AATCACCGATCTGTG GCAA TTC TTGC TTTTCCTTTTTCCGC SPA1412 1493711 - 1495750 + | hypothetical protein sodC 1496247 - 1495726 - | superoxide dismutase ydhF 1497223 - 1496327 - | putative oxidoreductase TERM 1910 1496767 - 1496755 - G 80 -9.1 -4.208 | opp_overlap 1496753 1496755 1496765 GCGTAAAATTAGAAA CGCCA AAA TGGCG CACTTTGCCGCTTTG TERM 1911 1496865 - 1496876 + g 85 -4.4 -5.17353 | opp_overlap 1496865 AACATATCCAGATAA TCTG TCGC CAGA TTTTTTAATGACTGT ydhL 1497513 - 1497274 - | hypothetical protein TERM 1912 1497651 - 1497673 + G 71 -7.6 -4.03234 | opp_overlap 1497651, overlap 1497652 CGATACCCGCGAACA TCTGCTGGCC ACC GGCGAGCAGC TTTGTATGCAACGGG TERM 1913 1497652 - 1497672 + G 72 -11.1 -3.01726 | opp_overlap 1497651, overlap 1497651 GATACCCGCGAACAT CTGCTGGCC ACC GGCGAGCAG CTTTGTATGCAACGG ydhM 1497616 - 1498215 + | TetR family transcriptional regulator TERM 1914 1498202 - 1498221 + F 83 -4.2 -5.41941 | AGACCATCATTGCAA CGCCTG AGCAGTAA CGGGCG TTTTTATTTCCTTTA nemA 1498274 - 1499371 + | N-ethylmaleimide reductase gloA 1499440 - 1499847 + | glyoxalase I TERM 1915 1499853 - 1499880 + F 100 -14.8 -4.2828 | opp_overlap 1499848, overlap 1499856 GGGTAACTGATCCCC CGCCGGGCGCAG GTCA CTGCGCCCGTTG TTTTACTGCATCCCG TERM 1916 1499856 - 1499877 + F 100 -17.3 -4.26327 | opp_overlap 1499848, overlap 1499853 TAACTGATCCCCCGC CGGGCGCAG GTCA CTGCGCCCG TTGTTTTACTGCATC TERM 1917 1499971 - 1499985 + G 75 -7.1 -4.45077 | TAACGCTCAACTTTC CGGTC TGTGC GACCG TTTTCGTGGTTTTTA TERM 1918 1500516 - 1500526 + G 75 -6.8 -4.40804 | overlap 1500486 ATGATACCGAGCGGA CAGC GGT GCTG TTTTGTGAAATCGTC rnt 1499948 - 1500595 + | ribonuclease T TERM 1919 1500639 - 1500656 + T 86 -11.3 -3.71649 | opp_overlap 1500639 GATGACGGTAAAAAA GCGACCT TTAC AGGTCGC TTTCCCCTTTCACAG TERM 1920 1500656 - 1500639 - T 100 -11.3 -5.06451 | opp_overlap 1500639 GATGACGGTAAAAAA GCGACCT TTAC AGGTCGC TTTCCCCTTTCACAG ydhD 1501020 - 1500673 - | hypothetical protein TERM 1921 1500979 - 1500998 + g 91 -7.9 -5.1101 | CAGGAGAATCGGGTT TTCAGCG ATCTGG CGCTGAA TTTTTTCGATAGTGG TERM 1922 1501202 - 1501216 + H 100 -4.3 -5.83822 | TAACGCATTCGTGTT TAGCA TTAAT TGCTA TTTTTTTTACATCTG TERM 1923 1501792 - 1501779 - g 74 -2.3 -5.09245 | GCAAAAGTACAAAAA GCGAC GAAG ACCGC GATGTCCAAACTCAT ydhO 1501323 - 1502177 + | putative secreted protein TERM 1924 1502210 - 1502180 - f 70 -9.8 -3.05066 | opp_overlap 1502181 1502182 AACAATTCGCTAATA TTTTATCCTGTCGT TTA ACGACAGGATAACT TCTTCTTTTGCGCCA TERM 1925 1502181 - 1502209 + F 95 -13.3 -4.20868 | opp_overlap 1502180, overlap 1502182 ACAATTCGCTAATAT TTTATCCTGTCGT TTA ACGACAGGATAAC TTCTTCTTTTGCGCC TERM 1926 1502182 - 1502208 + F 100 -16.8 -3.11798 | opp_overlap 1502180, overlap 1502181 CAATTCGCTAATATT TTATCCTGTCGT TTA ACGACAGGATAA CTTCTTCTTTTGCGC sodB 1502304 - 1502885 + | superoxide dismutase TERM 1927 1502895 - 1502916 + F 100 -14.5 -4.07885 | opp_overlap 1502887 1502886 GCATAAGTCTGAGTA CGCAGAAGG TACG CCTTCTGCG TTTTAGAGAGGGATA TERM 1928 1503450 - 1503426 - g 81 -7.1 -4.79174 | overlap 1503421 1503447 ACGTAATCAACAAAA CGCGTTTTGTC GCT GAAGAAACGCG TAACGCGGTCTGGAC TERM 1929 1503457 - 1503447 - g 77 -8.2 -4.15044 | overlap 1503426 TTGTCGCTGAAGAAA CGCG TAA CGCG GTCTGGACAGCAATT purR 1503353 - 1504378 + | DNA-binding transcriptional repressor PurR ydhB 1505307 - 1504375 - | putative DNA-binding transcriptional regulator TERM 1930 1505554 - 1505566 + G 70 -3.3 -4.69027 | opp_overlap 1505533 1505532, overlap 1505562 CGCCGCTGTCAGCGC CAGCC TAA GCCTG TTTTTAGCTGGCTTT TERM 1931 1505720 - 1505697 - g 73 -8.8 -3.85698 | gap 1, opp_overlap 1505696 1505697 1505709 1505710 TGCTGTGGGTAGAAA GC-GCGGCAGC ACT GCTGACGCTGC GCTTTGTGCAGGCCG TERM 1932 1506225 - 1506212 - g 70 -3.1 -4.82901 | GCGGCGCTACAAAAA TGGCA GGGC TACCA ATTGCTTCCGTGGCT ydhC 1505420 - 1506625 + | inner membrane transport protein YdhC cfa 1506915 - 1508063 + | cyclopropane fatty acyl phospholipid synthase TERM 1933 1508061 - 1508097 + T 74 -6.8 -4.27316 | gap 2, opp_overlap 1508067, overlap 1508065 1508068 1508069 CTGCGCGTTCCTCGC TAATCATCTCCCCCGCAT TTC ATGCGGGGGA-ATC-TTA TTTTCCGTTAGCCAA TERM 1934 1508065 - 1508094 + T 87 -10.1 -4.25859 | gap 1, opp_overlap 1508067, overlap 1508061 1508068 1508069 GCGTTCCTCGCTAAT CATCTCCCCCGCAT TTC ATGCGGGGGA-ATC TTATTTTCCGTTAGC TERM 1935 1508093 - 1508067 - T 81 -13 -2.70932 | opp_overlap 1508065 1508061 1508068 1508069 GTTCCTCGCTAATCA TCTCCCCCGCAT TTC ATGCGGGGGAAT CTTATTTTCCGTTAG TERM 1936 1508068 - 1508092 + T 100 -14.3 -3.72228 | opp_overlap 1508067, overlap 1508065 1508061 1508069 TTCCTCGCTAATCAT CTCCCCCGCAT TTC ATGCGGGGGAA TCTTATTTTCCGTTA TERM 1937 1508069 - 1508091 + T 100 -17.8 -2.82253 | opp_overlap 1508067, overlap 1508068 1508065 1508061 TCCTCGCTAATCATC TCCCCCGCAT TTC ATGCGGGGGA ATCTTATTTTCCGTT ribE 1508746 - 1508105 - | riboflavin synthase subunit alpha TERM 1938 1508787 - 1508773 - H 79 -4.2 -5.18866 | CTGAAATAAATAAAA GCAGAA CTG TTCAGC ACAATAGCAGGTGGA TERM 1939 1508905 - 1508921 + H 85 -7.2 -4.946 | overlap 1508919 CTGCTATTTCTTTTG GCTGCC ACTAC GGCGGC TTTTTAGTCTTTCAT TERM 1940 1509122 - 1509134 + G 77 -4.8 -4.93877 | ATCGGCACCTCTATC TGGC TTCCC GCCA TTTTGTTTGGTCACG TERM 1941 1509348 - 1509386 + G 100 -10.2 -4.88918 | overlap 1509350 CCGATAAAGCCGTGG GTTATCTTCGCGCGCTGC TGT GGGGCGCGCCAGGATACC TTTTCTTTCAGGTAG TERM 1942 1509651 - 1509638 - g 74 -3.1 -4.86621 | ATTCGTAATGAAAAA GGCTT TGGC AAACC TGATAGCGTCGTCAT ydhE 1508963 - 1510336 + | multidrug efflux protein TERM 1943 1510345 - 1510364 + T 90 -10 -4.39828 | opp_overlap 1510339 1510337 1510347 GCGATAATACGACGA TAGCCGTC GCAT GGCGGCTA TTTTCTCGACATGTT ssaU 1511867 - 1510809 - | secretion system apparatus protein SsaU TERM 1944 1510941 - 1510926 - G 71 -4.7 -4.63089 | CACTTCAAAAAATAA TGAGC GGGCCA GCTCA ACATTTTCAACAACG ssaT 1512643 - 1511864 - | putative type III secretion protein TERM 1945 1512270 - 1512251 - G 81 -3.6 -5.1383 | AATAACACACAAAAA TTGGCT GAAAAGCA AGCCAA AAAGTGAGGTTTCAG ssaS 1512910 - 1512644 - | putative type III secretion protein yscR 1513554 - 1512907 - | type III secretion system protein ssaQ 1514590 - 1513622 - | type III secretion system protein ssaP 1514945 - 1514571 - | putative type III secretion protein ssaO 1515303 - 1514926 - | putative type III secretion protein TERM 1946 1515147 - 1515125 - G 79 -7.8 -4.46854 | TTATCCAACAATAAA TGACAAGATA ACG TACCTTGCCA GCCCATTAATTCTTT ssaN 1516607 - 1515306 - | type III secretion system ATPase TERM 1947 1515705 - 1515716 + g 72 -2.2 -4.87786 | opp_overlap 1515703, overlap 1515703 TACCGTATAAAATGC GGTA ATAC TGCC TTTTTCTCCCATTCC ssaV 1518642 - 1516597 - | secretion system apparatus protein SsaV TERM 1948 1517528 - 1517518 - G 90 -5.4 -5.27938 | overlap 1517521 ATCCTCAAATAAAAA CCAT CGC ATGG CGTCAATATCACGAA TERM 1949 1517812 - 1517826 + g 82 -11.4 -3.85698 | overlap 1517807 AGAACTCAACTCTGT CGCCAG GTT CTGGCG TTTCTCACCCGGAAC ssaM 1518995 - 1518627 - | putative pathogenicity island protein ssaL 1520045 - 1519053 - | putative secretion system protein TERM 1950 1519639 - 1519655 + g 100 -7.3 -6.04324 | overlap 1519640 GTAAGCGTATCCAGT TGCGATT GCA AATCGCG TTTTTTCTTTTTTGA TERM 1951 1519640 - 1519654 + g 77 -8.6 -4.18934 | overlap 1519639 TAAGCGTATCCAGTT GCGATT GCA AATCGC GTTTTTTCTTTTTTG ssaK 1520709 - 1520035 - | putative pathogenicity island protein SPA1443 1521254 - 1520706 - | putative pathogenicity island protein TERM 1952 1520847 - 1520857 + g 70 -6.8 -4.21631 | overlap 1520853 AATAGCGGTACCGAT CTGC AAT GCAG TTTGTTGCATCACTT ssaJ 1522021 - 1521272 - | putative pathogenicity island lipoprotein ssaI 1522266 - 1522018 - | putative pathogenicity island protein ssaH 1522505 - 1522278 - | putative pathogenicity island protein ssaG 1522761 - 1522546 - | putative pathogenicity island protein sseG 1523544 - 1522855 - | putative pathogenicity island effector protein TERM 1953 1523158 - 1523148 - G 85 -2.4 -5.49569 | TAGCAATATAAAAAA CGGC ATT GCCT ATACTGTCGTGAGCC sseF 1524323 - 1523541 - | putative pathogenicity island effector protein TERM 1954 1524306 - 1524329 + g 73 -9 -3.90464 | opp_overlap 1524311, overlap 1524302 1524311 ATTGCTTGCCGCTGA CGGAATATGA ATTT TCATATTTCG TTCTGTTATTTAAGC sscB 1524767 - 1524339 - | putative pathogenicity island protein sseE 1525241 - 1524825 - | putative pathogenicity island effector protein sseD 1525831 - 1525244 - | putative pathogenicity island effector protein TERM 1955 1525658 - 1525679 + g 91 -9.5 -4.57569 | gap 1, overlap 1525678 TTTTTCTACGTTATA GCTGCGC-AT GAT ATCGCGCAGC TTTTTGGCAAGCTCC sseC 1527301 - 1525847 - | putative pathogenicity island effector protein TERM 1956 1527288 - 1527300 + g 74 -4.9 -4.69664 | CTATCGCTATTACTG TGAAT TCG ATTCA TTTTTAGCTCCTGTC sscA 1527777 - 1527304 - | putative Type III secretion system chaperone protein TERM 1957 1527621 - 1527609 - G 74 -4.7 -4.7629 | opp_overlap 1527612 TCAGCAATTGAAAAA GTCGC GCT GCGCC GGCGAATTCTTTTAC SPA1455 1528364 - 1527774 - | putative pathogenicity island effector effector protein TERM 1958 1528027 - 1528003 - G 81 -12.3 -3.524 | TATTTAGCCATATAA TCATCAATGGT CAT ACCATCGATGA GAATACCATTATCAC SPA1456 1528697 - 1528371 - | putative pathogenicity island protein ssaE 1529202 - 1528960 - | putative secretion system protein ssaD 1530421 - 1529210 - | putative pathogenicity island protein TERM 1959 1529387 - 1529375 - G 73 -9.1 -3.86897 | overlap 1529355 GCGACTCTGTACAAA GCCAG CCA CTGGC GCAGGCAGATACTTG spiA 1531895 - 1530402 - | putative outer membrane secretory protein spiC 1532298 - 1531897 - | putative pathogenicity island secreted effector protein TERM 1960 1533088 - 1533102 + G 77 -4.2 -4.89477 | opp_overlap 1533088 TATCGATGAAAAAAG CTTTCG TCG CGATAG TTTTATTCTTAACCA ssrA 1532699 - 1535461 + | putative two-component sensor kinase ssrB 1535492 - 1536130 + | putative two-component response regulator SPA1463 1536309 - 1537037 + | putative transcriptional regulator SPA1464 1537209 - 1538168 + | putative pathogenicity island protein ydhZ 1538476 - 1538264 - | hypothetical protein TERM 1961 1538553 - 1538538 - R 78 -4.8 -4.99947 | CTCAATTAAACAAAA TTTGAT GCAA ATCAAA GAAATAACGCAGTTT ttrR 1539194 - 1538574 - | putative two-component response regulator TERM 1962 1538600 - 1538617 + gr 91 -7.7 -5.00616 | ACGTTGTTCGTATTC TGGTCTC TGGC GAGGCCA TTTTTTCGAAACGCC TERM 1963 1538864 - 1538888 + gr 87 -8.5 -4.57073 | overlap 1538851 1538861 CACGCTCCAGCGCCG CCTGTAGCGGT TTT ACCGATACCGG TTTTTGCAGAAAATC ttrS 1540917 - 1539169 - | hypothetical protein TERM 1964 1539603 - 1539583 - G 74 -10.5 -3.54543 | AGTCACTGTCGGAAA TTGTTGCGC CAT ACGCAACAA TTGCCAGACATGATC TERM 1965 1541345 - 1541334 - H 74 -7.2 -4.21922 | opp_overlap 1541333 1541334 CTATTGAAAACCAAA CGCC GCAG GGCG CGTTTCGTACGACGG TERM 1966 1542380 - 1542392 + G 70 -9.1 -3.63991 | GGCGATGTTTCTTAG CGCCT TAC AGGCG TTCTTCGCGCTGATG ttrC 1541865 - 1542887 + | tetrathionate reductase subunit C membrane protein TERM 1967 1544640 - 1544627 - g 75 -6.7 -4.39828 | overlap 1544616 AATACCGCGACAAAA TTGCC CGCG GGCAA TCCCCTTATCCAGCC TERM 1968 1544984 - 1544956 - g 70 -8.7 -3.76224 | opp_overlap 1544963 1544976 GGCGTAGCCAGTAAA GCCACTACCGCCC GCT GGCCGGTTGTCGC CCCCGCCACTCACCG ttrA 1542880 - 1545942 + | tetrathionate reductase subunit A TERM 1969 1547741 - 1547763 + G 73 -5.7 -4.50976 | gap 1, opp_overlap 1547739 1547741, overlap 1547742 ATATCGGTAGCAATA CGTTCCTGTT ACAA AACAG-AACG TTTTATAATATGGAC TERM 1970 1548193 - 1548217 + G 80 -9.4 -4.08216 | opp_overlap 1548195 TTTCTGCAATGGGAA CATTACGCCA CCTTC TGGTGTAATG TTTTACGCACAATAA SPA1472 1547503 - 1548285 + | hypothetical protein SPA1473 1548298 - 1549191 + | putative hydrolase/acyltransferase SPA1474 1549213 - 1550556 + | putative amino acid permease TERM 1971 1550587 - 1550562 - f 83 -14.1 -2.64616 | overlap 1550572 1550574 1550575 GCTCGATTGACATTA TGCGCAACAAC ACCC GCTGTTGCGCA ACGCCGCCCCTGTTC TERM 1972 1550624 - 1550574 - f 70 -9.1 -3.39784 | gap 3, opp_overlap 1550589, overlap 1550562 1550572 1550575 TTATGCGCAACAACA CCCGCTGTTGCG-CAACGCCGCCC CTGTTC GGGCGGCGTTATCGC--CAGCGAC ATCGTAAACAGCGTA TERM 1973 1550623 - 1550575 - f 78 -12.6 -2.63549 | gap 3, opp_overlap 1550589, overlap 1550562 1550574 1550572 TATGCGCAACAACAC CCGCTGTTGCG-CAACGCCGCCC CTGTTC GGGCGGCGTTATCGC--CAGCGA CATCGTAAACAGCGT TERM 1974 1550589 - 1550610 + F 90 -14.4 -3.28712 | opp_overlap 1550575 1550574 1550572 CCCGCTGTTGCGCAA CGCCGCCC CTGTTC GGGCGGCG TTATCGCCAGCGACA TERM 1975 1551844 - 1551818 - g 72 -3.6 -4.77036 | overlap 1551820 1551843 TTCTATGATCAAAAA CCCGCGTCCG ACCCGCG CAGAAGCAGG CGACGTTGCGAACGC pykF 1550958 - 1552370 + | pyruvate kinase TERM 1976 1552395 - 1552425 + F 86 -11.3 -3.76224 | opp_overlap 1552403, overlap 1552403 TGTGAATTAATTTGT TTAAAAAAGCGCC CTTCC GGCGCTTTTTTTA TTTAATCGATAGCCA TERM 1977 1552403 - 1552417 + F 100 -8.5 -5.99154 | opp_overlap 1552403, overlap 1552395 AATTTGTTTAAAAAA GCGCC CTTCC GGCGC TTTTTTTATTTAATC TERM 1978 1552417 - 1552403 - f 91 -8.5 -5.01732 | opp_overlap 1552403 1552395 AATTTGTTTAAAAAA GCGCC CTTCC GGCGC TTTTTTTATTTAATC TERM 1979 1552501 - 1552528 + F 72 -2.6 -5.03747 | TTATCTAAGAAGAAT CCGATGGAAGCC CCCT GTTTTCTTTCGG TTTTTTAGGGACTTT lppA 1552681 - 1552917 + | major outer membrane lipoprotein TERM 1980 1552972 - 1552921 - f 95 -17 -2.54574 | gap 1, opp_overlap 1552938, overlap 1552909 1552923 1552938 1552971 TACCGTAAGTAATAG TACCTGCGTAATAAAAATGGCGCAC ATT GTGCGCCATTTTT-TTACACATATA ACCACACAAAATGCA TERM 1981 1552970 - 1552923 - f 93 -15.2 -2.80699 | gap 1, opp_overlap 1552938, overlap 1552909 1552921 1552938 CCGTAAGTAATAGTA CCTGCGTAATAAAAATGGCGCAC ATT GTGCGCCATTTTT-TTACACATA TAACCACACAAAATG TERM 1982 1552956 - 1552938 - f 100 -14.6 -5.06414 | opp_overlap 1552938, overlap 1552923 1552921 CCTGCGTAATAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTACACATAT TERM 1983 1552938 - 1552956 + F 100 -14.6 -5.42862 | opp_overlap 1552938 1552923 1552921 CCTGCGTAATAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTACACATAT lppB 1552999 - 1553238 + | major outer membrane lipoprotein TERM 1984 1553276 - 1553258 - f 100 -14.6 -4.57755 | opp_overlap 1553258 ACGCACGATATAAAA TGGCGCAC ATC GTGCGCCA TTTCTTTACATACAT TERM 1985 1553258 - 1553276 + F 100 -14.6 -4.46514 | opp_overlap 1553258 ACGCACGATATAAAA TGGCGCAC ATC GTGCGCCA TTTCTTTACATACAT lppB 1553316 - 1553555 + | major outer membrane lipoprotein TERM 1986 1553598 - 1553570 - T 87 -14.7 -2.83112 | opp_overlap 1553575, overlap 1553575 ATTTAACGCACGATA TAAAATGGCGCAC ATC GTGCGCCATTTTT TGTCCGTCGTTTGCT TERM 1987 1553593 - 1553575 - T 100 -14.6 -4.57755 | opp_overlap 1553575, overlap 1553570 ACGCACGATATAAAA TGGCGCAC ATC GTGCGCCA TTTTTTGTCCGTCGT TERM 1988 1553575 - 1553593 + T 100 -14.6 -5.28778 | opp_overlap 1553570 1553575 ACGCACGATATAAAA TGGCGCAC ATC GTGCGCCA TTTTTTGTCCGTCGT ynhG 1554622 - 1553621 - | LysM domain-containing protein TERM 1989 1554723 - 1554699 - R 72 -9.3 -3.60952 | overlap 1554697 1554721 1554722 GAACAACAAAATATA CGCTCTCTCCA CTC TGGATAAAGCG ACGTCGCCGTCCGAC ynhA 1555193 - 1554777 - | cysteine desufuration protein SufE TERM 1990 1554855 - 1554868 + g 74 -2.3 -5.0133 | overlap 1554851 AGAAGGTGTGAGGTG TTGCG TAAG CGCCA TTTTTTCGAACCATG TERM 1991 1555797 - 1555773 - R 76 -4.9 -4.89729 | overlap 1555775 GAGAAAACGTAAAAA TCGCAGTCCAG CGC CTGGACGTCAA CAGCATGGTGCATCA TERM 1992 1556383 - 1556404 + r 71 -3.7 -4.82901 | TAACTTCACGCTGCA GTATGGG AAAATCCG CCCGTAC TTTTTCTACAGGAAA TERM 1993 1556799 - 1556817 + r 75 -6.6 -4.46073 | TGGTCTTGTGCAACT GGCGGCTG TTA CAGTAGCC TTTGTTATGTTCCAG sufC 1558414 - 1557668 - | cysteine desulfurase ATPase component sufB 1559918 - 1558431 - | cysteine desulfurase activator complex subunit SufB sufA 1560295 - 1559927 - | iron-sulfur cluster assembly scaffold protein SPA1486 1560722 - 1562068 + | putative transporter TERM 1994 1562125 - 1562095 - T 100 -12.7 -5.45802 | CCCGGAAAAGAAAAA CCCTTAAGTCTGT TCAAT ACAGGCTTAAGGG TTCCGGCCCCATCCG TERM 1995 1562341 - 1562313 - T 70 -9.6 -3.06696 | gap 1, overlap 1562311 TTGCCTGGTAACATA GCCGGATGACGGC TAAC GCCTT-ATCCGGC CTACACAGACTTTAT ydiH 1562583 - 1562356 - | hypothetical protein SPA1489 1562996 - 1562643 - | hypothetical protein ydiJ 1566106 - 1563050 - | FAD-binding protein TERM 1996 1563860 - 1563871 + g 76 -3 -5.01732 | CAGAGGTAAATCCAC CATA CCGA TATG TTTTTTCGCCAGATT TERM 1997 1564516 - 1564531 + g 80 -4.6 -5.07652 | GGTTAAGTCGATTAT GCGGAT CAAA AGCCGC TTTTATTTTGCGCAG TERM 1998 1565701 - 1565688 - G 81 -2.3 -5.40072 | TCCGGCGCAAAAAAA TAGCC ATAC GGCTT TAATGCCTGATTAAG ydiK 1566371 - 1567489 + | putative inner membrane protein TERM 1999 1567492 - 1567518 + F 100 -15.8 -3.56862 | opp_overlap 1567491 1567490, overlap 1567482 1567493 1567495 CAAGCAGTCATAATC CCGTCGGGCGGC ATT GCCGCCCGATGC TTTAGCGACGTTTAT TERM 2000 1567493 - 1567517 + F 100 -19.3 -2.73635 | opp_overlap 1567491 1567490, overlap 1567492 1567482 1567495 AAGCAGTCATAATCC CGTCGGGCGGC ATT GCCGCCCGATG CTTTAGCGACGTTTA TERM 2001 1567495 - 1567515 + F 100 -18.3 -2.90992 | opp_overlap 1567491 1567490, overlap 1567493 1567492 1567482 GCAGTCATAATCCCG TCGGGCGGC ATT GCCGCCCGA TGCTTTAGCGACGTT TERM 2002 1567750 - 1567769 + F 100 -7.1 -6.23209 | CTGTGTGTAGTCTTT GCCCGTC TCCTAC GATGGGC TTTTTTTTTACTTCA aroD 1567841 - 1568599 + | 3-dehydroquinate dehydratase TERM 2003 1568678 - 1568630 - T 86 -14.8 -2.52464 | gap 1, opp_overlap 1568626 1568626 1568662 GCGTCGGGCAACTTA CGCCCTATCCGGCCTACACAACA TGTT TCTTGTGCAGGCCGGATAA-GCA TAGCGTTATCTGGTC ppsA 1571077 - 1568699 - | phosphoenolpyruvate synthase TERM 2004 1569237 - 1569219 - G 74 -7.4 -4.19746 | TCCAGCGCAAAACAA TCGCGGAA ACT TTCTGCGA CGTAACGACCCGCGC TERM 2005 1569634 - 1569660 + g 83 -7.2 -4.62336 | TGACCTTCAGCGGTA GCTCTGGCATGG TGT CTACGCTGGAGC TTTTTACGCTGAAAT ydiA 1571406 - 1572239 + | hypothetical protein TERM 2006 1573221 - 1573211 - g 71 -4.6 -4.62471 | GGCAACTGTCAAAAA CAGC ATC GCCG CCAGTTGGACGTATG aroH 1572395 - 1573441 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2007 1573418 - 1573435 + F 79 -8.3 -4.2828 | opp_overlap 1573414 TTGGAAAAACTTGCC GCGGCGG TAGA CAGCCGC TTTTAATAGCTCGCC TERM 2008 1573447 - 1573469 + F 100 -15.6 -4.21631 | opp_overlap 1573444 CCGCTTTTAATAGCT CGCCCATCCT GCC GGGATGGGCG TTTCTTCGATGCGTT ydiE 1573598 - 1573789 + | hypothetical protein ydiU 1575267 - 1573825 - | hypothetical protein TERM 2009 1574362 - 1574376 + g 70 -10 -3.41878 | overlap 1574359 AATAAAAGGGGTTAA CGTCTG CGC CAGACG TTGTAAATTCCACAG ydiV 1576042 - 1575329 - | hypothetical protein TERM 2010 1576147 - 1576158 + r 71 -7.2 -4.04789 | CATTTTTCTTGTTTA CCGG TGAA CCGG TTCCTTTTTTTAACT TERM 2011 1576215 - 1576232 + r 80 -6.9 -4.72986 | opp_overlap 1576216, overlap 1576216 TCTTGTACTTTTAAC AGGGCGT GAAC ACGCCCG TTTTTAATAAAAGTA TERM 2012 1576231 - 1576216 - R 73 -10.4 -3.04144 | opp_overlap 1576215 1576216 CTTGTACTTTTAACA GGGCGT GAAC ACGCCC GTTTTTAATAAAAGT TERM 2013 1576216 - 1576231 + r 77 -10.4 -3.4331 | opp_overlap 1576216, overlap 1576215 CTTGTACTTTTAACA GGGCGT GAAC ACGCCC GTTTTTAATAAAAGT nlpC 1576820 - 1576356 - | putative lipoprotein btuD 1577646 - 1576897 - | vitamin B12-transporter ATPase TERM 2014 1577651 - 1577662 + r 70 -2.2 -5.04325 | AATTGAGACATTATT TTGC CAAC GCGA TTTTTATGCTTTCCA btuE 1578197 - 1577646 - | putative glutathione peroxidase btuC 1579269 - 1578289 - | vtamin B12-transporter permease TERM 2015 1579331 - 1579357 + r 83 -13.8 -2.58861 | opp_overlap 1579337, overlap 1579337 TCCTTTACTTGAAAG AAAAAAGGCCGC AAT GCGGCCTTTTTA GTTATACGGGTCATC TERM 2016 1579351 - 1579337 - R 100 -12.8 -5.64421 | opp_overlap 1579337 1579331 ACTTGAAAGAAAAAA GGCCGC AAT GCGGCC TTTTTAGTTATACGG TERM 2017 1579337 - 1579351 + r 100 -12.8 -4.93365 | opp_overlap 1579337, overlap 1579331 ACTTGAAAGAAAAAA GGCCGC AAT GCGGCC TTTTTAGTTATACGG ihfA 1579771 - 1579472 - | integration host factor subunit alpha pheT 1582163 - 1579776 - | phenylalanyl-tRNA synthetase subunit beta TERM 2018 1581584 - 1581611 + g 83 -9.8 -4.20516 | overlap 1581569 TGGTTGCCGTAACCG GCGCCATTTCAG GCTC CTGGAGCGGCGC TTTGTTCAGTACCGC pheS 1583162 - 1582179 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2019 1583256 - 1583226 - R 77 -12.1 -2.89564 | gap 1, opp_overlap 1583234, overlap 1583234 TCTCGATTTCAGATA CAAAAAAAGCCTCC ATCA GGAGGC-TTTTTTG CGCTGTTTTTCGTTT TERM 2020 1583234 - 1583249 + r 100 -10.4 -5.10077 | opp_overlap 1583226 1583234 TCAGATACAAAAAAA GCCTCC ATCA GGAGGC TTTTTTGCGCTGTTT TERM 2021 1583249 - 1583234 - R 100 -10.4 -5.76633 | opp_overlap 1583234, overlap 1583226 TCAGATACAAAAAAA GCCTCC ATCA GGAGGC TTTTTTGCGCTGTTT TERM 2022 1583454 - 1583432 - R 100 -12 -4.99568 | opp_overlap 1583434, overlap 1583434 GAACAGTAAATAAAA GAGAGGGAGC CAG GCTCCCTCTT TTCACTGGCTTATGC TERM 2023 1583452 - 1583434 - R 100 -14.6 -4.09862 | opp_overlap 1583434, overlap 1583432 ACAGTAAATAAAAGA GAGGGAGC CAG GCTCCCTC TTTTCACTGGCTTAT TERM 2024 1583434 - 1583452 + r 100 -14.6 -4.21676 | opp_overlap 1583432 1583434 ACAGTAAATAAAAGA GAGGGAGC CAG GCTCCCTC TTTTCACTGGCTTAT rplT 1583820 - 1583464 - | 50S ribosomal protein L20 rpmI 1584068 - 1583871 - | 50S ribosomal protein L35 rpmI 1583940 - 1584110 + | 50S ribosomal subunit protein A TERM 2025 1584120 - 1584147 + Tr 72 -8.4 -3.81146 | opp_overlap 1584121 1584122, overlap 1584121 ACATAGGCGAACAAA ACCTGTGAAGCC CGAA GGCTTCACAGAA TTGTTACTTGAAGGC TERM 2026 1584121 - 1584146 + Tr 77 -11.9 -2.88366 | opp_overlap 1584121 1584122, overlap 1584120 CATAGGCGAACAAAA CCTGTGAAGCC CGAA GGCTTCACAGA ATTGTTACTTGAAGG TERM 2027 1584146 - 1584121 - TR 100 -14.1 -4.66987 | opp_overlap 1584121 1584120, overlap 1584122 CATAGGCGAACAAAA CCTGTGAAGCC CGAA GGCTTCACAGA ATTGTTACTTGAAGG TERM 2028 1584145 - 1584122 - TR 100 -15.4 -3.39469 | opp_overlap 1584121 1584120, overlap 1584121 ATAGGCGAACAAAAC CTGTGAAGCC CGAA GGCTTCACAG AATTGTTACTTGAAG infC 1584706 - 1584164 - | translation initiation factor IF-3 thrS 1586638 - 1584710 - | threonyl-tRNA synthetase TERM 2029 1585709 - 1585719 + g 74 -2.4 -5.00616 | ATCTTTATAGTTGTC CCAG TGC CCGG TTTTTTCCCACAGCA TERM 2030 1586352 - 1586337 - G 70 -3.2 -4.80882 | overlap 1586339 ACGTCATAGTAAAAA CCGTTG TCGA CAACCG GACCGATCGCCATTT TERM 2031 1586788 - 1586767 - H 72 -10.3 -2.88758 | overlap 1586757 1586769 ACAACCTTCGACACA GACGAAAAT CGCT ATTTTCGTC CGGCATGATGATGGT rfc 1587530 - 1588753 + | O-antigen polymerase TERM 2032 1588760 - 1588776 + T 100 -9.3 -4.92385 | opp_overlap 1588758 1588755 AATAAATAAGTTATA CGGCGTC AAT GCCGCCG TTTTATTTGGCTCTG SPA1513 1589282 - 1589076 - | hypothetical protein TERM 2033 1589345 - 1589324 - R 72 -10.3 -2.88758 | overlap 1589314 1589326 ACAACCTTCGACACA GACGAAAAT CGCT ATTTTCGTC CGGCATGATGATGGT SPA1514 1590309 - 1589455 - | putative DNA/RNA non-specific endonuclease SPA1515 1590620 - 1590306 - | hypothetical protein TERM 2034 1590495 - 1590477 - G 76 -10.4 -3.69506 | opp_overlap 1590480, overlap 1590475 1590480 GAGCTCAAAAGAATA CAACATGA TAT TCATGTTG ATACCAAAAAACATC TERM 2035 1590681 - 1590718 + H 77 -9.3 -3.87815 | gap 1, opp_overlap 1590688, overlap 1590682 1590685 1590688 GTTATATTTAAAGGT TTAATAAGCACTGC-GCA TCA TGCTGCTGTGCTTATTAC TTTGTAAAAATAAGA TERM 2036 1590682 - 1590717 + H 79 -12.8 -2.92475 | gap 1, opp_overlap 1590688, overlap 1590681 1590685 1590688 TTATATTTAAAGGTT TAATAAGCACTGC-GCA TCA TGCTGCTGTGCTTATTA CTTTGTAAAAATAAG TERM 2037 1590685 - 1590714 + H 75 -10.1 -3.60798 | gap 1, opp_overlap 1590688, overlap 1590682 1590681 1590688 TATTTAAAGGTTTAA TAAGCACTGC-GCA TCA TGCTGCTGTGCTTA TTACTTTGTAAAAAT TERM 2038 1590688 - 1590711 + H 71 -7.4 -3.93401 | gap 1, opp_overlap 1590688, overlap 1590685 1590682 1590681 TTAAAGGTTTAATAA GCACTGC-GCA TCA TGCTGCTGTGC TTATTACTTTGTAAA TERM 2039 1591237 - 1591219 - g 80 -5.2 -4.84761 | overlap 1591221 1591222 ATAGGCGCAGAAAAA TACCCTGC CTG GCAGGATC AAATTGAAAACCGTT TERM 2040 1591235 - 1591221 - g 71 -7.8 -4.04397 | overlap 1591219 1591222 AGGCGCAGAAAAATA CCCTGC CTG GCAGGA TCAAATTGAAAACCG SPA1516 1590790 - 1591722 + | putative outer membrane protein TERM 2041 1591763 - 1591741 - T 100 -17.8 -3.69395 | opp_overlap 1591731 1591737 GTCACCACGGAATAA CCGGGTTACG TAA CGTAACCCGG CGCAATATTACATCT ydiY 1592529 - 1591771 - | putative outer membrane protein TERM 2042 1592396 - 1592406 + g 82 -5.4 -5.03314 | opp_overlap 1592376 1592396 CCCGCATTCAGATTA CCTT CAA AAGG TTTTTTCGCGGTGGA TERM 2043 1592573 - 1592557 - H 89 -6.5 -5.32944 | CGTACAACTAAAAAA GAGACCA CGA CGGTCCC GGAAACTTTCATAGG pfkB 1592818 - 1593750 + | 6-phosphofructokinase 2 TERM 2044 1593778 - 1593752 - f 72 -10.8 -2.76696 | overlap 1593751 TTTCCGCGCAATAAT CGTTTCCCCCTC GCC GAGGGGGATACC GGAAAATCGGTTAAC TERM 2045 1593796 - 1593811 + F 78 -11.8 -3.01791 | AAAATCGGTTAACGG GCGGCG CATC CGCCGC TGTTAAAAACACAGT TERM 2046 1593937 - 1593947 + G 78 -2.4 -5.16237 | CTCAATAACCATCTG ACGC GCA GCGG TTTTTTGCTGACATT TERM 2047 1594073 - 1594045 - g 86 -10.3 -4.10552 | opp_overlap 1594004 1594003 1594044 GCTGATGAAATCAAA GCGCTTGTCGC CGGACTT GCGAAAAGCGC GTTAGATAAGGATGT ydiZ 1593847 - 1594137 + | hypothetical protein TERM 2048 1594420 - 1594395 - g 77 -8.3 -4.08144 | gap 1, opp_overlap 1594388 1594402, overlap 1594388 1594396 GCGATGAACGAGAAA TGCTTC-GCGGT TTT ACCGCTGAAGCC GATCAGCTGGAGCTG TERM 2049 1594419 - 1594396 - g 76 -11.8 -3.04404 | gap 1, opp_overlap 1594388 1594402, overlap 1594388 1594395 CGATGAACGAGAAAT GCTTC-GCGGT TTT ACCGCTGAAGC CGATCAGCTGGAGCT SPA1520 1594244 - 1595104 + | hypothetical protein TERM 2050 1595115 - 1595137 + T 84 -7.7 -4.81851 | overlap 1595116 TATAGGTACAGCCCA CGCCGGATA CGGGC TATCCGGCA TTTTTCAGTTTACAT TERM 2051 1595116 - 1595136 + T 82 -11.2 -3.48026 | overlap 1595115 ATAGGTACAGCCCAC GCCGGATA CGGGC TATCCGGC ATTTTTCAGTTTACA yniB 1595683 - 1595147 - | hypothetical protein TERM 2052 1596274 - 1596261 - g 70 -3.1 -4.82901 | GCTTCTGCAGAAAAA TTGCC CTAC AGCAA ACCGCACCCGCAGGT TERM 2053 1596380 - 1596395 + G 72 -11.8 -2.64099 | opp_overlap 1596377 1596378, overlap 1596379 AATCGCGGCAAAGGC GGCGCG AATG CGCGCC ATTGTGGTGCCAGCA yniC 1595832 - 1596500 + | 2-deoxyglucose-6-phosphatase TERM 2054 1596659 - 1596671 + G 86 -4.1 -5.36441 | TTTATCATGACGGCG GAAGG ACA TCTTC TTTTTTCTATAGCCA ydjM 1596650 - 1597237 + | hypothetical protein TERM 2055 1597906 - 1597895 - g 75 -5.8 -4.65895 | TTTTGTACCGAAAAA TCCG TTTG CGGA TCTGACTGGCGCAAA ydjN 1597374 - 1598765 + | putative sodium:dicarboxylate symporter TERM 2056 1598829 - 1598859 + T 100 -9.8 -5.84381 | opp_overlap 1598834 AAAATGTCTGTCACT AAAAACGCCGGT CTCCAGT ACCGGCGTTTTG TTTTTTTCTTAGTCA TERM 2057 1598854 - 1598834 - T 93 -9.7 -4.72272 | opp_overlap 1598829 GTCTGTCACTAAAAA CGCCGGT CTCCAGT ACCGGCG TTTTGTTTTTTTCTT cedA 1599110 - 1598868 - | cell division modulator TERM 2058 1600410 - 1600393 - g 74 -3.3 -4.88736 | opp_overlap 1600397, overlap 1600395 1600397 GATGAGTCACAAAAA CTGACCG GTCG CGATCCG GATTTTCACCGCCGG TERM 2059 1600891 - 1600869 - g 77 -11.2 -3.54029 | overlap 1600883 1600884 CTCCATTAATGACAA CTGGCCGCGC GAA ACGCCGCCAG CACCAAAACGCGGCG katE 1599475 - 1601727 + | hydroperoxidase II TERM 2060 1601758 - 1601729 - T 74 -8.7 -3.86346 | gap 1, overlap 1601739 CGATTCCTGCATAAA CGGCA-AAAAATGC GGC GCATTCTTGCGCCG CAAACTCAGGAGCTA TERM 2061 1601760 - 1601739 - T 100 -15.9 -5.1361 | overlap 1601729 ATAAACGGCAAAAAA TGCGGCGCA TTCT TGCGCCGCA AACTCAGGAGCTAAA celG 1602529 - 1601771 - | hypothetical protein celF 1603897 - 1602542 - | phospho-beta-glucosidase B TERM 2062 1603909 - 1603925 + r 70 -9.5 -3.10513 | TCATAATATCTCCCT TCAGTGT ATG ACACTGA TATGTATTACGCTAT celD 1604861 - 1604022 - | DNA-binding transcriptional regulator ChbR celC 1605221 - 1604874 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA celB 1606630 - 1605272 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC TERM 2063 1606350 - 1606334 - G 85 -4.3 -5.252 | CATGCCGATAAAAAA TGGCGCC ATG AGCGACA TAATGCCCAATGTGC TERM 2064 1606670 - 1606648 - R 72 -9.2 -3.64192 | opp_overlap 1606650, overlap 1606650 AAAAATACCCTTAAA TACCGCAATA AAA TATTGCGGTT AGTGTATGAAATAAC TERM 2065 1606668 - 1606650 - R 82 -11.8 -3.38603 | opp_overlap 1606650, overlap 1606648 AAATACCCTTAAATA CCGCAATA AAA TATTGCGG TTAGTGTATGAAATA TERM 2066 1606650 - 1606668 + r 82 -11.8 -3.32498 | opp_overlap 1606648 1606650 AAATACCCTTAAATA CCGCAATA AAA TATTGCGG TTAGTGTATGAAATA celA 1607033 - 1606713 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB TERM 2067 1607287 - 1607302 + r 74 -8.2 -3.95817 | opp_overlap 1607287 GCAGGCACAAAAAAA CCGGCT CGCA GGCCGG TTTCCTTGAATGTTC TERM 2068 1607302 - 1607287 - R 100 -7.5 -5.64274 | opp_overlap 1607287 GCAGGCACAAAAAAA CCGGC TCGCAG GCCGG TTTCCTTGAATGTTC osmE 1607675 - 1607334 - | DNA-binding transcriptional activator OsmE nadE 1607894 - 1608721 + | NAD synthetase SPA1535 1608842 - 1609723 + | nucleotide excision repair endonuclease TERM 2069 1609778 - 1609730 - T 80 -5.9 -5.0065 | opp_overlap 1609730 1609770, overlap 1609770 CAGTCATAAAGAAAA CCGCCGATTCTGTCCACCTCA ACGATTG TGTTGTCGACAAGACCGGCGG TCTTAAATTATGCGG spy 1610283 - 1609798 - | periplasmic protein astE 1611587 - 1610619 - | succinylglutamate desuccinylase astB 1612923 - 1611580 - | succinylarginine dihydrolase TERM 2070 1612294 - 1612254 - G 78 -11.7 -3.16881 | opp_overlap 1612263 GATTCACCTGATTAA GACGCGCCACGGCCTCG CTGGCTT CGCGGCTCTGGCGCGCC GGATAACGAGCGGGT TERM 2071 1612736 - 1612721 - G 75 -6 -4.64334 | overlap 1612722 AACGCCGGAATAAAA GGCCGC TCAT GCGGCG GGATCACCGCCTGGG TERM 2072 1612735 - 1612722 - G 70 -9.5 -3.37877 | overlap 1612721 ACGCCGGAATAAAAG GCCGC TCAT GCGGC GGGATCACCGCCTGG astD 1614398 - 1612920 - | succinylglutamic semialdehyde dehydrogenase TERM 2073 1613668 - 1613648 - G 70 -9 -3.64487 | opp_overlap 1613648 CCACATCCTCAATAA TGAGCGGA TTGTT TCCGCCCA TTTCAAGGGCCAGGA astA 1615429 - 1614395 - | arginine succinyltransferase TERM 2074 1614867 - 1614855 - G 79 -3.3 -5.26316 | GTACCGCATAAAAAA TCCGC CCG GCTGA AATCCATAGAAAAAA argD 1616646 - 1615420 - | bifunctional succinylornithine transaminase/acetylornithine transaminase xthA 1617092 - 1617898 + | exonuclease III SPA1543 1617971 - 1618387 + | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase SPA1544 1618622 - 1618347 - | hypothetical protein TERM 2075 1618936 - 1618908 - g 73 -6 -4.44915 | gap 1 CAACCATGTACAAAA GCGCG-ACCCG CATCAAAC CGAGTTCGCGC AAGCCGTCCGTGAAG TERM 2076 1619100 - 1619076 - g 77 -4.9 -4.91109 | overlap 1619091 1619092 GCTGGACGACAAAAA CCAGGTGCA GGTAAAT CGCGCCTGG CGCGTGCAGTTCAAC TERM 2077 1619988 - 1619971 - g 71 -9.8 -3.53012 | TTTGCGCCGGGTAAA GCCGCC AACGCG GGCGGC GTGGCGACATCAGGT TERM 2078 1620174 - 1620199 + G 70 -8.9 -3.75169 | opp_overlap 1620169, overlap 1620175 1620177 TTTCGTGAAAGTCGC CGACGCCATGC TGGC GCAGGGCGTCA TTTAATCCCGTCGTC TERM 2079 1620175 - 1620198 + G 72 -12.4 -2.8478 | opp_overlap 1620169, overlap 1620174 1620177 TTCGTGAAAGTCGCC GACGCCATGC TGGC GCAGGGCGTC ATTTAATCCCGTCGT gdhA 1618861 - 1620204 + | glutamate dehydrogenase TERM 2080 1620249 - 1620271 + T 95 -7.6 -5.41143 | overlap 1620208 1620247 1620266 TTATTCGGTCTGACG GCCTGTCTCC TCA GCAGGCGGGC TTTTTTTGCCCGCTC topB 1622183 - 1620234 - | DNA topoisomerase III TERM 2081 1620279 - 1620301 + g 74 -6.9 -4.24787 | gap 1, overlap 1620266 AGGCGGGCTTTTTTT GCCCGCTCGC TTAC GCG-GCGCGC TCTTTTTCTTGTCTC TERM 2082 1620795 - 1620807 + g 74 -6.9 -4.30576 | opp_overlap 1620789 GGCGACAACCGGCAG CGGCG TAC CGTCG TTTTCCTCGTCGCGC TERM 2083 1621038 - 1621052 + g 84 -2.8 -5.31275 | opp_overlap 1621016, overlap 1621012 CGTCGGGATAATCGC GTGG TGCGCAT CCAC TTTTTTGTCATCCCA selD 1623231 - 1622188 - | selenophosphate synthetase TERM 2084 1623295 - 1623333 + r 70 -5.3 -4.42386 | gap 1, opp_overlap 1623292 ATGTGGTAAGTATCA CTGTCTGAATTACCGCGC CTTT GCTCAG-AATCCAGACAG TTTTATCCCTCAGCG ydjA 1623900 - 1623349 - | hypothetical protein TERM 2085 1623644 - 1623666 + g 91 -7.6 -5.01546 | opp_overlap 1623636 1623653 GTAATGATCAGCGGC GCGCGAAACG GCG CATTACGCGC TTTTTCTATCGCTTT sppA 1624074 - 1625930 + | protease 4 TERM 2086 1626745 - 1626731 - g 70 -7 -4.09685 | opp_overlap 1626729 1626731 CGTCAGCCGGTAAAA GCGCTG ATT CTGCGC TCTTATGGCGTAGGC ansA 1626026 - 1627042 + | cytoplasmic asparaginase I pncA 1627069 - 1627725 + | nicotinamidase/pyrazinamidase TERM 2087 1627888 - 1627871 - T 88 -8.3 -4.90217 | opp_overlap 1627870 GAAACAGATTAAAAA GCGCGGG CTGG CCGGCGC AATGTTCTGGGAATA yeaC 1628354 - 1628076 - | hypothetical protein yeaA 1628824 - 1628396 - | methionine sulfoxide reductase B TERM 2088 1628447 - 1628435 - G 71 -6.2 -4.36914 | opp_overlap 1628446, overlap 1628437 TTTCTCGTCAGAAAA GGCC AGCGA GGCC GAGTTAACGCAATAG TERM 2089 1628576 - 1628562 - G 72 -2.1 -4.91511 | ATGCCATGAGAAAAA TCGTC TATGT AACGA ATCGCCTCTTCGCTG TERM 2090 1629079 - 1629095 + H 72 -2.9 -5.09245 | ATTGACACGATTCCG CTTGACG CTG CGTAAGG TTTTTGTAATTTTAC gapA 1629151 - 1630146 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2091 1630172 - 1630189 + F 100 -11.3 -5.95166 | opp_overlap 1630174 CACAGTCATTGGTAA GAGCGAC TCAG GTCGCTC TTTTTTTTGCTTAAA yeaD 1630475 - 1631359 + | putative enzyme related to aldose 1-epimerase SPA1556 1632315 - 1631458 - | putative oxidoreductase SPA1557 1633608 - 1632412 - | arylsulfatase regulator TERM 2092 1633028 - 1633007 - G 74 -8 -3.97689 | gap 1, overlap 1632997 GATAACGTCAAAGAA CGCT-GCGC TTTTT GCGCGAGCG GCTCAACAATGGGAA TERM 2093 1633414 - 1633401 - G 74 -3.1 -4.96501 | gap 1 TTTGATAAAAAGAAA GACCGC ATA GCG-TC GGCTCTCCCCCCTGC TERM 2094 1633869 - 1633845 - R 81 -12.9 -2.69151 | opp_overlap 1633843 1633840 1633839 1633849, overlap 1633842 1633849 GCGTTTCAGACAGCA CAAAGCCCGCA TAA CGCAGGCTTTG TCATGGTTTTTCCGG TERM 2095 1633865 - 1633849 - R 73 -7.9 -4.04318 | opp_overlap 1633843 1633840 1633839 1633849, overlap 1633845 1633842 TTCAGACAGCACAAA GCCCGCA TAA CGCAGGC TTTGTCATGGTTTTT mipA 1634644 - 1633898 - | putative outer membrane protein TERM 2096 1637560 - 1637548 - g 76 -3.3 -5.10208 | TAATCTGAAGAAAAA CCAGC ATC GCCAG CTTAACGAGTATAAA TERM 2097 1638035 - 1638046 + G 71 -4.4 -4.63218 | GCGAAGGAAGTGGAT GAAC ATGA GTTC TTTTATTCGCAAGAG yeaH 1637126 - 1638412 + | hypothetical protein TERM 2098 1638444 - 1638420 - f 95 -12.9 -3.69354 | opp_overlap 1638420 GTGCATAACCCTAAA CCTGCCCGT TGTTATT ACGGGCAGG TTTATTAGCAACTTA TERM 2099 1638420 - 1638444 + F 95 -12.9 -4.1673 | opp_overlap 1638420 GTGCATAACCCTAAA CCTGCCCGT TGTTATT ACGGGCAGG TTTATTAGCAACTTA TERM 2100 1639338 - 1639320 - g 80 -5.2 -4.85599 | opp_overlap 1639326 GTCACCGCAGAAAAA CGCCGC GCGTTTT GCGACG CCTTTGAGGCTATTA yeaJ 1639083 - 1640576 + | methyl-accepting chemotaxis protein yeaK 1640617 - 1641144 + | hypothetical protein SPA1563 1641248 - 1641141 - | putative inner membrane protein TERM 2101 1641809 - 1641777 - g 81 -12 -3.60296 | gap 1, opp_overlap 1641784 TACGCTGATGGGAAA CCAACC-GCAGCTCG TCGC CGGGCTGCTGGTCGG TACGGTACTTGGCGT yeaL 1641454 - 1641900 + | hypothetical protein yeaM 1642674 - 1641880 - | putative transcriptional regulator TERM 2102 1641918 - 1641939 + g 100 -11.5 -5.03715 | opp_overlap 1641916 CGCCCGTCAGATACT GGCCTGGCG TCTG CCCCAGGCC TTTTTTAAACATGGT yeaN 1642775 - 1643959 + | hypothetical protein yeaO 1644078 - 1644425 + | putative bacteriophage protein SPA1568 1644722 - 1644411 - | hypothetical protein TERM 2103 1644548 - 1644560 + g 80 -10.5 -3.91716 | CCGTGACCAGCCACA GCGCC CGA GGCGC TTCTTTCGGCAGTAA TERM 2104 1644657 - 1644670 + g 74 -9.5 -3.65812 | opp_overlap 1644655 CGATTTACCAATATT CCGCC GTCC GGCGG TTGTCTTAGCGCCAA yaoF 1645042 - 1644791 - | hypothetical protein TERM 2105 1645426 - 1645456 + r 87 -14.3 -2.90219 | opp_overlap 1645429 1645433, overlap 1645429 1645433 TAAATTCATTTTGAA TAATAAAGGCTAC CTGTC GTAGCCTTTATTA TCTCTGAAAGTTCTG TERM 2106 1645453 - 1645429 - R 86 -11.6 -3.63694 | opp_overlap 1645426 1645429 1645433, overlap 1645433 ATTCATTTTGAATAA TAAAGGCTAC CTGTC GTAGCCTTTA TTATCTCTGAAAGTT TERM 2107 1645429 - 1645453 + r 86 -11.6 -3.5947 | opp_overlap 1645429 1645433, overlap 1645426 1645433 ATTCATTTTGAATAA TAAAGGCTAC CTGTC GTAGCCTTTA TTATCTCTGAAAGTT TERM 2108 1645449 - 1645433 - R 79 -8 -4.45068 | opp_overlap 1645433 1645429 1645426, overlap 1645429 ATTTTGAATAATAAA GGCTAC CTGTC GTAGCC TTTATTATCTCTGAA TERM 2109 1645433 - 1645449 + r 79 -8 -4.42974 | opp_overlap 1645429 1645433, overlap 1645429 1645426 ATTTTGAATAATAAA GGCTAC CTGTC GTAGCC TTTATTATCTCTGAA yeaQ 1645723 - 1645475 - | hypothetical protein SPA1571 1645916 - 1645731 - | hypothetical protein TERM 2110 1645959 - 1645980 + r 100 -12.3 -5.52384 | gap 1 CTTCCAGTATTATTT GCCCGC-CTC ACC GAGTGCGGGC TTTTTTTGCTAACCG SPA1573 1646678 - 1646037 - | hypothetical protein TERM 2111 1646831 - 1646859 + r 76 -11.7 -2.75769 | opp_overlap 1646831, overlap 1646830 TTCAATACGCAAAAA CCGCATCACGC TGGCGAC GCGCGATGCGG CTTCTGATTTAAAAA TERM 2112 1646859 - 1646831 - R 100 -13.9 -4.74706 | opp_overlap 1646831 1646830 TTCAATACGCAAAAA CCGCATCACGC TGGCGAC GCGCGATGCGG CTTCTGATTTAAAAA yoaG 1647090 - 1646908 - | hypothetical protein yeaR 1647455 - 1647093 - | hypothetical protein TERM 2113 1647621 - 1647598 - R 77 -10.2 -3.35344 | overlap 1647599 1647601 CCGAAAGGAGAGCAA TGACCCGCCG TTGA CGACGGGTCC GGGAGGGTTAAGACT TERM 2114 1647620 - 1647599 - R 83 -13.7 -2.60725 | overlap 1647598 1647601 CGAAAGGAGAGCAAT GACCCGCCG TTGA CGACGGGTC CGGGAGGGTTAAGAC TERM 2115 1647618 - 1647601 - R 72 -10.5 -2.83634 | overlap 1647599 1647598 AAAGGAGAGCAATGA CCCGCCG TTGA CGACGGG TCCGGGAGGGTTAAG yeaS 1648267 - 1647629 - | leucine export protein LeuE aroQ 1649008 - 1648463 - | chorismate mutase TERM 2116 1649187 - 1649220 + G 93 -4.7 -5.4756 | opp_overlap 1649187 1649197, overlap 1649197 AAAATATACAACAAA TCACACAAATGTGAT GCGC ATCACGTTTTTATGA TTTTTTATTACAGTT TERM 2117 1649200 - 1649187 - g 70 -5.3 -4.5002 | opp_overlap 1649187 1649197, overlap 1649197 AAAATATACAACAAA TCACA CAAA TGTGA TGCGCATCACGTTTT SPA1578 1649091 - 1649246 + | hypothetical protein SPA1579 1649325 - 1649573 + | hypothetical protein TERM 2118 1649684 - 1649662 - T 73 -11.4 -2.71144 | opp_overlap 1649666, overlap 1649666 GACTGGGGTGAACGA CAAATCTGCC GGG AGCAGATTTG AACGTCGCGTGCGAC TERM 2119 1649806 - 1649781 - T 89 -11.1 -4.07455 | opp_overlap 1649781 1649784, overlap 1649784 TATGAAGAGTATAAA CAAGGGAGGGG TTTA CTCCTCCCCTG TTCGTTAATAATGCA TERM 2120 1649781 - 1649806 + T 79 -11.1 -3.41693 | opp_overlap 1649781 1649784, overlap 1649784 TATGAAGAGTATAAA CAAGGGAGGGG TTTA CTCCTCCCCTG TTCGTTAATAATGCA TERM 2121 1649784 - 1649803 + T 73 -11.4 -2.56164 | opp_overlap 1649781 1649784, overlap 1649781 GAAGAGTATAAACAA GGGAGGGG TTTA CTCCTCCC CTGTTCGTTAATAAT TERM 2122 1649803 - 1649784 - T 79 -9.2 -4.14977 | opp_overlap 1649784 1649781, overlap 1649781 GAAGAGTATAAACAA GGGAGGGG TTTA CTCCTCCC CTGTTCGTTAATAAT SPA1580 1650676 - 1649828 - | putative transcriptional regulator TERM 2123 1650602 - 1650561 - G 80 -4.3 -5.10461 | overlap 1650564 TCTATGCAATAAAAA CGATTGCCAGCTTCATCTT TGGT AGGTTGAAGCAGGCCATAG CGTTCCCAGGACCTG SPA1581 1651338 - 1650745 - | putative regulatory protein TERM 2124 1651038 - 1651021 - G 77 -4.1 -5.02074 | TGACCTGGGAAAAAA TTGACCA GCAG CGGCCAA AATCAGTAACTCACG aadA 1652271 - 1651483 - | aminoglycoside resistance protein TERM 2125 1652340 - 1652359 + r 95 -12.2 -4.19506 | opp_overlap 1652340 AACGGCAGAAAAAAA GCTCGCTA TTCA TAGCGAGC TTTTAACATTGCAAT TERM 2126 1652359 - 1652340 - R 100 -12.2 -5.63504 | opp_overlap 1652340 AACGGCAGAAAAAAA GCTCGCTA TTCA TAGCGAGC TTTTAACATTGCAAT SPA1583 1653030 - 1652380 - | hypothetical protein TERM 2127 1653041 - 1653061 + r 87 -11.3 -4.00486 | ACCAAAACGTTCCCC TCATCTTTC TTA GAAAGATGA TTGTTATATTATAAC TERM 2128 1653105 - 1653123 + r 100 -11.7 -5.21709 | opp_overlap 1653103 1653099 CAACAGAAACTCAGC GGCCACC GCGCA GGTGGCC TTTTTTGATATCAAC SPA1585 1653550 - 1653224 - | hypothetical protein TERM 2129 1653603 - 1653624 + H 83 -10.1 -4.02953 | opp_overlap 1653600, overlap 1653601 CTGCACAGAAACGCC GGGATAGCC AAAC GGCTACCCC TCTTTTTCATACTTT SPA1586 1653744 - 1654877 + | hypothetical protein TERM 2130 1654915 - 1654896 - T 100 -13.6 -3.78934 | opp_overlap 1654895 CTCTGCCGACAATAA CGGGAACC CATG GGTTCCCG GTGCGTTAACGGCGA SPA1587 1655549 - 1654959 - | putative ABC transport ATP-binding subunit TERM 2131 1655148 - 1655128 - G 71 -4.6 -4.5442 | TCGGCAATCAGAAAA CGCGTTCG TGGGT CAAGCGCG CGCAGTATCGCAATA SPA1588 1656340 - 1655543 - | putative ABC transport ATP-binding protein SPA1589 1657146 - 1656334 - | putative inner membrane transport protein TERM 2132 1656923 - 1656890 - G 75 -13.1 -2.52516 | gap 1, opp_overlap 1656912, overlap 1656897 GCCGCCATCACTAAC GCGATAACGCCGCTGC ACA GC-GCGGCGCCAACGC CAATTTGTAAACTGG TERM 2133 1656916 - 1656897 - G 75 -11.4 -3.37464 | gap 1, opp_overlap 1656912, overlap 1656890 TCACTAACGCGATAA CGCCGCTGC ACA GC-GCGGCG CCAACGCCAATTTGT SPA1590 1658113 - 1657136 - | putative inner membrane transport protein SPA1591 1659744 - 1658110 - | putative substrate-binding transport protein TERM 2134 1660366 - 1660395 + H 71 -3.5 -4.76274 | opp_overlap 1660367 1660370, overlap 1660367 1660370 TACACCACTTTTTAA ATGACTGTCCGGA CATT TTCGGACGGTAAG TTTTCTATTAATTTA SPA1592 1660426 - 1660740 + | putative lipoprotein TERM 2135 1660773 - 1660744 - f 76 -8.5 -4.05607 | opp_overlap 1660750, overlap 1660746 1660750 AGAGGACAATAACAA CAGTAAGCCGGCG ATGC CGCCGGCTTTTTA TCCCATTTTACGTGC TERM 2136 1660771 - 1660746 - f 72 -8.9 -3.60967 | opp_overlap 1660750, overlap 1660744 1660750 AGGACAATAACAACA GTAAGCCGGCG ATGC CGCCGGCTTTT TATCCCATTTTACGT TERM 2137 1660750 - 1660767 + F 100 -14.1 -4.90296 | opp_overlap 1660746 1660744 1660750 CAATAACAACAGTAA GCCGGCG ATGC CGCCGGC TTTTTATCCCATTTT TERM 2138 1660767 - 1660750 - f 93 -14.1 -3.50302 | opp_overlap 1660750, overlap 1660746 1660744 CAATAACAACAGTAA GCCGGCG ATGC CGCCGGC TTTTTATCCCATTTT SPA1593 1660889 - 1661419 + | putative cytochrome TERM 2139 1661427 - 1661463 + T 80 -10.1 -3.94877 | gap 1, opp_overlap 1661417, overlap 1661428 AATCATGACTATTTC GGCCAT-CCCGGCGTG AGAGAG CACGCCGGGCAAGGCA TTATTATTCAGCGCT TERM 2140 1661428 - 1661462 + T 85 -13.6 -2.96444 | gap 1, opp_overlap 1661417, overlap 1661427 ATCATGACTATTTCG GCCAT-CCCGGCGTG AGAGAG CACGCCGGGCAAGGC ATTATTATTCAGCGC SPA1594 1662463 - 1661501 - | hypothetical protein TERM 2141 1662319 - 1662305 - G 74 -7.8 -4.18506 | CGACGGGTAAAATAA CACCGG ATT CCAGTG CGCTTCCCCCTCGCG TERM 2142 1662659 - 1662639 - R 80 -9.7 -3.89881 | opp_overlap 1662639, overlap 1662629 ACTAACCTTCAGAAA TGCCTGAAG GCT CATCAGGCA TTTCCACTTCAACCT TERM 2143 1662639 - 1662659 + r 79 -9.7 -3.66356 | opp_overlap 1662629 1662639 ACTAACCTTCAGAAA TGCCTGAAG GCT CATCAGGCA TTTCCACTTCAACCT TERM 2144 1662893 - 1662925 + r 82 -13.4 -3.05384 | ACAATCATCGGCCAA CCGCGCCAGGGTCT TGCAT ACGCTCTGGCGCGG TTAAATCCCCAGGCC SPA1596 1663124 - 1662951 - | hypothetical protein TERM 2145 1663621 - 1663641 + r 72 -5.4 -4.47217 | GTGAATCCTGTGAGA TCTGGCGT TATTT ACACCAGA TTTTCCTTCCTGCTT TERM 2146 1663804 - 1663833 + r 100 -14.3 -3.68359 | overlap 1663808 1663827 CCTGTTTTGTAACTG GCGGTGCGGAAGG CGAA CCTTCCGCATAGC TTATGCTTTTCAGAA TERM 2147 1663808 - 1663829 + r 86 -14.5 -2.65876 | overlap 1663804 1663827 TTTTGTAACTGGCGG TGCGGAAGG CGAA CCTTCCGCA TAGCTTATGCTTTTC pagC 1664400 - 1663843 - | outer membrane invasion protein TERM 2148 1663978 - 1663991 + g 73 -5.3 -4.63218 | CCAGGCAAATCCCGT TTTCC TTGA GGAAA TTTTGTTAGAAAAAG TERM 2149 1664094 - 1664084 - G 75 -4 -4.93365 | GCGTATAACGAAAAA TTGT CAG ACAA TCGATAGGCTGGCCC SPA1600 1664906 - 1664778 - | hypothetical protein SPA1601 1665156 - 1664992 - | hypothetical protein TERM 2150 1665404 - 1665366 - g 72 -2.3 -4.92363 | gap 1, overlap 1665370 AAATACCGATAAAAA GCAAGCCAGGCAGATTAG TTCA CCATCCTGCCCGACA-GC AAAACCCATGATGTC pagD 1665205 - 1665468 + | putative outer membrane virulence protein cspH 1665600 - 1665812 + | putative cold shock protein envE 1666214 - 1666735 + | putative lipoprotein msgA 1666916 - 1667155 + | putative virulence protein TERM 2151 1667193 - 1667210 + F 79 -12.7 -2.89191 | opp_overlap 1667193, overlap 1667195 ATGTCCGATCGAAAA CAGCGCC CTGA GGCGCTG TCTGTGACGATATAA TERM 2152 1667210 - 1667193 - f 95 -12.7 -4.18197 | opp_overlap 1667193 1667195 ATGTCCGATCGAAAA CAGCGCC CTGA GGCGCTG TCTGTGACGATATAA TERM 2153 1667195 - 1667208 + F 70 -9.5 -2.99649 | opp_overlap 1667193, overlap 1667193 GTCCGATCGAAAACA GCGCC CTGA GGCGC TGTCTGTGACGATAT cdtB 1668029 - 1668838 + | putative toxin-like protein SPA1607 1668911 - 1669288 + | hypothetical protein SPA1608 1669978 - 1669436 - | hypothetical protein SPA1609 1670898 - 1670170 - | toxin subunit TERM 2154 1670876 - 1670890 + g 76 -2.9 -5.05712 | opp_overlap 1670876, overlap 1670870 CTAACTATAGATAAG GTTAA GAATA TTAAC TTTTTCATTATTTCT SPA1610 1671328 - 1670915 - | toxin subunit TERM 2155 1672084 - 1672072 - R 72 -4.8 -4.59109 | TAGATGGCGTAAAAA CCTG ATGAG CAGG AATATCGATAGCCAG TERM 2156 1672209 - 1672199 - R 82 -6.8 -4.91194 | opp_overlap 1672179 ATAATAAATATAAAA GCAG TTA CTGC CTACCTCAAGAAGTA SPA1611 1673399 - 1672275 - | putative bacteriophage protein TERM 2157 1672301 - 1672315 + g 74 -4.3 -4.6951 | TTATGCAGTCTCTAT TAAGC GCCTG GCTTA TTTGTTTTGCATAAT TERM 2158 1673799 - 1673847 + r 93 -15.6 -2.76171 | opp_overlap 1673808 1673814, overlap 1673808 1673814 TGATAACCGTTCGAA TGCTAATAATAAAAACGGGGAC GTTAA GTCCCCGTTTTTGTTTTTAACA ATTATCGTTATTACA TERM 2159 1673838 - 1673808 - R 93 -12.7 -3.68222 | opp_overlap 1673808 1673799 1673814, overlap 1673814 TTCGAATGCTAATAA TAAAAACGGGGAC GTTAA GTCCCCGTTTTTG TTTTTAACAATTATC TERM 2160 1673808 - 1673838 + r 100 -14.9 -4.63542 | opp_overlap 1673808 1673814, overlap 1673799 1673814 TTCGAATGCTAATAA TAAAAACGGGGAC GTTAA GTCCCCGTTTTTG TTTTTAACAATTATC TERM 2161 1673814 - 1673832 + r 100 -11.7 -5.61881 | opp_overlap 1673814 1673808, overlap 1673808 1673799 TGCTAATAATAAAAA CGGGGAC GTTAA GTCCCCG TTTTTGTTTTTAACA TERM 2162 1673832 - 1673814 - R 100 -11.7 -5.29445 | opp_overlap 1673808 1673799 1673814, overlap 1673808 TGCTAATAATAAAAA CGGGGAC GTTAA GTCCCCG TTTTTGTTTTTAACA icdA 1675108 - 1673858 - | isocitrate dehydrogenase TERM 2163 1674294 - 1674305 + g 71 -7.2 -3.965 | ACCACAATCTCTTTA CCCG TGTT CGGG TTCTTAATTTTCAGC TERM 2164 1675332 - 1675320 - g 76 -2.7 -5.11613 | overlap 1675321 ACACCATGCAAAAAA CTTCT TTT AGAAA TCACTACGTTAAGCG TERM 2165 1675574 - 1675549 - g 72 -11.2 -3.14132 | gap 1 TTTGGTGCTGACTAA TGACGGCGCGC TGCAG GCGCGCC-TCA CGCAACCGGGCAAAC rluB 1675280 - 1675945 + | putative ribosomal large subunit pseudouridine synthase B SPA1614 1675942 - 1676271 + | putative secreted protein TERM 2166 1676499 - 1676525 + G 76 -2.9 -5.12068 | gap 1 ATGCATCAGTGGATT GCGCCGGATAAG ACCC CGT-TCCTGCGC TTTTTATTCGCTATC ymfB 1676283 - 1676744 + | putative MutT-family protein trmU 1676798 - 1677904 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2167 1677913 - 1677962 + F 85 -7.2 -4.93877 | opp_overlap 1677913 1677920 GGTCTGATTATTCAA TACACAACATCATTCAAGTCGC CTCAAA GCGGCTTAAAAGATGAAGTGTA TTTTATTTGATACAA ycfC 1677991 - 1678632 + | hypothetical protein TERM 2168 1678693 - 1678711 + G 71 -4.4 -4.58395 | opp_overlap 1678693 1678694 1678697, overlap 1678694 CGCTACGGCGATAAA GTCAGCGC GCT GCGCGGAA TTTTTAGCGAATACG purB 1678636 - 1680006 + | adenylosuccinate lyase TERM 2169 1680014 - 1680044 + F 76 -9.1 -3.67724 | overlap 1680011 1680015 TTAAATAATATGTGC CTCACCCTCTTTT CTTCA GAAAGAGGGTGAC TATTTGTCTGGTTTA TERM 2170 1680015 - 1680043 + F 79 -12.6 -2.7955 | overlap 1680014 1680011 TAAATAATATGTGCC TCACCCTCTTTT CTTCA GAAAGAGGGTGA CTATTTGTCTGGTTT phoP 1680130 - 1680804 + | DNA-binding transcriptional regulator PhoP TERM 2171 1681947 - 1681937 - g 74 -6.8 -4.25104 | TGTCGGCGAGCAAAA CGAC TTT GTCG AAGTTATGGGCAACG phoQ 1680804 - 1682267 + | sensor protein PhoQ ycfD 1682348 - 1683469 + | hypothetical protein SPA1622 1684843 - 1683509 - | hypothetical protein TERM 2172 1684156 - 1684143 - G 76 -3.1 -5.00616 | gap 1 TTCTGCTGCAAAAAA GAGGCG ACG CGC-TC ACGATTATCCCAGGT TERM 2173 1684812 - 1684785 - G 100 -9.2 -4.87665 | overlap 1684789 CTCCAGGCAGAAAAA TTGATGGCGGAA AATA TCCCGCCATAAA TAATAAAACACTTCA pepT 1686076 - 1684847 - | peptidase T TERM 2174 1685889 - 1685911 + g 72 -4.1 -4.76892 | gap 1 CCCTCAACATTGGCC GGGAGCGTCG CCAT CAACG-TCCC TTTTTCACTTAATGT TERM 2175 1686717 - 1686682 - g 78 -2.5 -5.17576 | gap 1, opp_overlap 1686700, overlap 1686699 TACGAATGCAAAAAA CACCAGCCGC-CGAGA TAGCG CCTCGCGTGACCGATG CGCTGCGTATGGTGC potA 1686327 - 1687463 + | putrescine/spermidine ABC transporter ATPase protein TERM 2176 1688262 - 1688274 + G 76 -10.5 -3.67597 | GCTGTTGATTTACTG GCGGG CTT CCCGC TTATTGAATAAGAAG potB 1687447 - 1688310 + | spermidine/putrescine ABC transporter membrane protein TERM 2177 1689254 - 1689244 - g 76 -5.4 -4.77719 | GAAAACGCAAGAAAA GGTA ACC TACC TGGCAGCGAAAATTC TERM 2178 1689617 - 1689639 + G 78 -2.1 -5.26316 | gap 1 CACGTTCGCTCAGAA CAACA-AAGC GGCT GTTTATGTTG TTTTTTGTAAAATCA sifA 1688639 - 1689649 + | secreted effector protein TERM 2179 1690208 - 1690231 + G 81 -11.7 -3.53012 | ATTGGCTCGTTAACC GCGGTGGCG CTTTAT CGCTACCGC TTTCGCGGGAAGCCA potC 1689965 - 1690744 + | spermidine/putrescine ABC transporter membrane protein TERM 2180 1690749 - 1690735 - f 72 -8.5 -3.75115 | opp_overlap 1690734, overlap 1690731 TCGTGATAAAACCAA GGGCC GATAA GGCCC GTAATTCAGGGGACG potD 1690769 - 1691815 + | spermidine/putrescine ABC transporter periplasmic substrate-binding protein cobB 1692718 - 1691897 - | NAD-dependent deacetylase TERM 2181 1692768 - 1692757 - R 73 -2.2 -5.1615 | gap 1, overlap 1692760 GTAAGATGTAAAAAA GCAGC ACC GC-GC ATCCCACCTGCATCC ycfX 1693646 - 1692735 - | N-acetyl-D-glucosamine kinase ycfW 1694919 - 1693675 - | outer membrane-specific lipoprotein transporter subunit LolE lolD 1695620 - 1694919 - | lipoprotein transporter ATP-binding subunit ycfU 1696923 - 1695613 - | outer membrane-specific lipoprotein transporter subunit LolC TERM 2182 1697176 - 1697162 - g 75 -6.4 -4.58395 | GTTATGCCTGAAAAA CAACGT TAC ACGCTG CCGACAAAAGCGGGC TERM 2183 1697560 - 1697546 - g 90 -5.6 -5.14563 | opp_overlap 1697548, overlap 1697547 1697548 CTGGTGATGAAAAAA GGCCAG CGG CTGTCC CGCGACGCTCTGCGC TERM 2184 1698291 - 1698305 + G 80 -4.2 -5.08824 | AGTTCCTCGAATCTT TCAGCG GTC CGGTGA TTTTTTCGGTGGAAA TERM 2185 1698811 - 1698782 - g 82 -11.4 -3.85698 | gap 1, overlap 1698765 1698766 GCGCCGCTGCATAAA CTGGGCG-GCGAC GCCTG GTCGCGCGCCCGG CAGAAAGCGGCGGAA TERM 2186 1699634 - 1699622 - g 83 -10.5 -4.01564 | overlap 1699612 GAAAATATTCAGAAA GCCGC AGA GCGGC TGGCGGAACTGGTGC mfd 1697150 - 1700596 + | transcription-repair coupling factor TERM 2187 1700958 - 1700930 - g 76 -3.2 -5.03314 | gap 1, opp_overlap 1700938, overlap 1700932 GCGATCGCCAAAAAA TATAACGTGGGCT TTTT AGCCCT-GTTACA GGCCAACCCCGGCAT ycfS 1700744 - 1701709 + | hypothetical protein TERM 2188 1701759 - 1701735 - T 87 -9.9 -4.33417 | opp_overlap 1701738, overlap 1701737 1701738 CTGACCGACAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAGATGCGCCTGT TERM 2189 1701757 - 1701737 - T 93 -12.5 -3.76888 | opp_overlap 1701738, overlap 1701735 1701738 GACCGACAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAGATGCGCCT TERM 2190 1701738 - 1701756 + T 100 -16 -4.62069 | opp_overlap 1701737 1701735 1701738 ACCGACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC TERM 2191 1701756 - 1701738 - T 93 -16 -2.8541 | opp_overlap 1701738, overlap 1701737 1701735 ACCGACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC tnpA 1702296 - 1701838 - | transposase for insertion sequence element IS200 TERM 2192 1702409 - 1702427 + r 100 -16 -4.18018 | opp_overlap 1702399 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA ycfR 1702764 - 1702507 - | putative secreted protein TERM 2193 1703542 - 1703530 - g 71 -6.3 -4.24786 | CGCAGAATATATAAA CTGTA TTT TACAG GGAATGTCGATCAGC ycfQ 1703006 - 1703641 + | TetR family regulatory protein TERM 2194 1703693 - 1703667 - T 100 -10.1 -5.93809 | opp_overlap 1703667 TTCGGATAAAAAAAA GCCCCTCAGCC TGAGC GAATGAGGGGC TAACTTGCAGAGTAC ycfJ 1704243 - 1703716 - | hypothetical protein TERM 2195 1704426 - 1704395 - R 90 -13.8 -3.42583 | gap 1 GCAAGAGATGGAGAA GCG-CTCACCGGC GCGAGCA GCCGGTGAGGCGC AGAGAAATTAATGCA ndh 1705714 - 1704434 - | NADH dehydrogenase TERM 2196 1705629 - 1705639 + g 89 -3.2 -5.4505 | TTTCTGTCTACCAGC GTGA TTT TCGC TTTTTTCTTGCGCCC TERM 2197 1705805 - 1705766 - R 77 -10.4 -3.41982 | opp_overlap 1705762, overlap 1705754 AAATTTATTAACCAA TTGTTAATTAAAAGTTAT TAGT ATAGCCTTTAATTAACAA CAAGTTACGTTAATG TERM 2198 1705954 - 1705939 - R 100 -10.4 -5.67063 | opp_overlap 1705939 TTGAGCATAAAAAAA CCAGCC GCAA GGCTGG TTATCCGGTCACTGA TERM 2199 1705939 - 1705954 + r 77 -10.4 -3.33492 | opp_overlap 1705939 TTGAGCATAAAAAAA CCAGCC GCAA GGCTGG TTATCCGGTCACTGA ycfP 1706534 - 1705992 - | hypothetical protein ycfO 1707572 - 1706559 - | beta-hexosaminidase TERM 2200 1706690 - 1706680 - G 70 -6.8 -4.08706 | opp_overlap 1706680 1706675 CCTTTATGATACAAA CGTG TAA CACG TTCTGCTTTGATCGG thiK 1708419 - 1707595 - | thiamine kinase TERM 2201 1708194 - 1708182 - G 90 -6.2 -5.24129 | CCGGCGTATAAAAAA GCGC TCGCG GCGC CAGACTGGCTGGCAA TERM 2202 1708390 - 1708369 - G 76 -10.9 -3.64984 | gap 1, overlap 1708367 ATACTGGGGAAAATA GCGCGAC-AG GAT CTCGTCGCGC GTTAAGGGATTATTG ycfM 1709038 - 1708400 - | putative lipoprotein TERM 2203 1709012 - 1709028 + g 72 -2.1 -4.91109 | opp_overlap 1708996 1708994, overlap 1708996 1709013 CGCCAGCGCAGCGAT GGCAGCG TAG CGATGCA TTTTTGTCATCAAAA ycfL 1709426 - 1709052 - | putative lipoprotein ycfF 1709788 - 1709429 - | purine nucleoside phosphoramidase TERM 2204 1712362 - 1712345 - R 100 -12.7 -5.14965 | opp_overlap 1712345, overlap 1712332 1712331 AGCGCCATTAAAAAA GGCAGCC GAAT GGCTGCC TTAATTCTCCCCAAC TERM 2205 1712345 - 1712362 + r 85 -12.7 -3.44146 | opp_overlap 1712332 1712331 1712345 AGCGCCATTAAAAAA GGCAGCC GAAT GGCTGCC TTAATTCTCCCCAAC ptsG 1713822 - 1712389 - | glucose-specific PTS system IIBC components TERM 2206 1712978 - 1712995 + g 74 -6.9 -4.24002 | opp_overlap 1712978 GCGGAAATCATGATA CCGCCCA CTTT TGCGCGG TTTTCCGGTTTAGCA TERM 2207 1714045 - 1714072 + r 82 -11.2 -3.59627 | opp_overlap 1714042, overlap 1714064 TGTTTCCATAAGCTC GCTCACCGCCCC TTTT GTGGCGGTGAAC TTTACGCGCTTTGCT ycfH 1714914 - 1714117 - | putative metallodependent hydrolase TERM 2208 1714593 - 1714582 - G 71 -7.2 -3.98016 | opp_overlap 1714582 1714581 ATGATGAATAAAAGA CGCC TGCT GGCG GATTTTGGTCTCAGG holB 1715929 - 1714925 - | DNA polymerase III subunit delta' TERM 2209 1715873 - 1715890 + g 76 -5.6 -4.72272 | GTGCCCACGTCCCGC CTGGTA ACTTTC TACCAG TTTTTCATAGGCGGG tdk 1716567 - 1715926 - | thymidylate kinase TERM 2210 1716110 - 1716123 + g 83 -9.5 -4.08692 | opp_overlap 1716104 1716105 CGATCCAAATCGCCG CGCGC TCTG GCGCG TTTTAGCCCGACTTC yceG 1717513 - 1716557 - | hypothetical protein TERM 2211 1717430 - 1717411 - G 80 -10 -3.96148 | gap 1 TTTTTTCATCATAAA GCTGGTCGC CAA GCG-CCAGC CGCCCCGTTCCCGCC TERM 2212 1717487 - 1717504 + g 77 -11.3 -3.57144 | AATAAGTAACGTGCT GTTCGCC AGAT GGCGAAC TTTCCACATCCCCAC pabC 1718391 - 1717582 - | 4-amino-4-deoxychorismate lyase TERM 2213 1718469 - 1718485 + r 81 -5 -5.17744 | opp_overlap 1718469, overlap 1718463 ATGCCTGATAAAAAA GGCCCG ACAAG CGGACC TTTTTATTAATGTCT TERM 2214 1718485 - 1718469 - R 87 -7.2 -5.24531 | opp_overlap 1718469 1718463 ATGCCTGATAAAAAA GGCCCG ACAAG CGGACC TTTTTATTAATGTCT fabF 1719756 - 1718515 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 2215 1719087 - 1719112 + g 85 -12.5 -3.51329 | CATCGCGTTCTTTAT CCCACGGACGG CTCG CCGCCTGTGGG TTATCGTTGCGGGTC TERM 2216 1719806 - 1719834 + r 71 -9.6 -3.15056 | gap 1, opp_overlap 1719807 1719809, overlap 1719804 GGACAAAAAGATAAA ACT-CAGGCGGTC GAAC GACCGCCTGGAGA TGTTCACTTACGCCT TERM 2217 1719833 - 1719807 - R 100 -13.1 -5.02287 | gap 1, opp_overlap 1719806 1719804, overlap 1719809 GACAAAAAGATAAAA CT-CAGGCGGTC GAAC GACCGCCTGGAG ATGTTCACTTACGCC TERM 2218 1719830 - 1719809 - R 90 -15.9 -2.72919 | opp_overlap 1719806 1719804, overlap 1719807 CAAAAAGATAAAACT CAGGCGGTC GAAC GACCGCCTG GAGATGTTCACTTAC acpP 1720078 - 1719842 - | acyl carrier protein fabG 1720968 - 1720234 - | 3-ketoacyl-(acyl-carrier-protein) reductase fabD 1721910 - 1720981 - | acyl carrier protein S-malonyltransferase TERM 2219 1721718 - 1721735 + g 70 -3.3 -4.74539 | gap 1, opp_overlap 1721717, overlap 1721718 AAGCGGTTAATAACG CC-GGCTG CGT CTGCCAGG TTTTATTCAGTTCTT fabH 1722879 - 1721926 - | 3-oxoacyl-(acyl carrier protein) synthase III plsX 1724038 - 1722959 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 2220 1723201 - 1723212 + g 90 -5.8 -5.24129 | TGAGGTGACTGAATC GCCT CGTC AGGC TTTTTTGTAACCAAC rpmF 1724345 - 1724172 - | 50S ribosomal protein L32 yceD 1724918 - 1724397 - | hypothetical protein TERM 2221 1724986 - 1724958 - H 83 -10.3 -3.74077 | opp_overlap 1724964, overlap 1724964 CGTCATATAGTCAAA GAAAAAGGCAGCC TGC GGTTGCCTTTTGC CAATAATTCGCACAC TERM 2222 1724964 - 1724980 + H 83 -10.1 -4.12902 | opp_overlap 1724958 1724964 ATAGTCAAAGAAAAA GGCAGCC TGC GGTTGCC TTTTGCCAATAATTC TERM 2223 1724980 - 1724964 - H 95 -7.9 -5.31519 | opp_overlap 1724964, overlap 1724958 ATAGTCAAAGAAAAA GGCAGCC TGC GGTTGCC TTTTGCCAATAATTC maf 1725116 - 1725700 + | Maf-like protein TERM 2224 1725718 - 1725730 + T 70 -9.1 -3.30124 | opp_overlap 1725705 AATCTGCCTGATGGC GACGC GAT GCGTC TTATCAGGCCTACGG TERM 2225 1725764 - 1725788 + T 72 -8.5 -3.77196 | opp_overlap 1725758 ATCACACGATTGTAG GCCTGATAAGC AAC GCGCATCAGGC TTTACTACGTAATAC rluC 1726742 - 1725783 - | 23S rRNA pseudouridylate synthase C SPA1665 1727180 - 1726932 - | hypothetical protein TERM 2226 1728414 - 1728398 - g 71 -5.8 -4.36914 | GCGCGCGGTAGAAAA CCGCCT GCGTG AAGCGG TGCGTCAGGACCGGG TERM 2227 1729122 - 1729110 - g 76 -3.3 -5.11112 | AAAGCGGAAGAAAAA GCGGA GCG TCAGC AGGATCGTCGCAAGC rne 1727316 - 1730519 + | ribonuclease E TERM 2228 1730538 - 1730555 + T 100 -12.7 -5.96219 | opp_overlap 1730538 AAATGCTGATACAAA GCCGACC GCCA GGTCGGC TTTTTTTTATGCCTC TERM 2229 1730555 - 1730538 - T 95 -12.7 -4.05322 | opp_overlap 1730538 AAATGCTGATACAAA GCCGACC GCCA GGTCGGC TTTTTTTTATGCCTC TERM 2230 1730734 - 1730706 - T 100 -14.6 -5.55664 | TGACGACTAAAAAAA TGCCCGCGCC GGGGTGGAT GGCGCGGGCA GACAAAACATATCCA flgL 1731731 - 1730778 - | flagellar hook-associated protein FlgL TERM 2231 1731049 - 1731059 + g 87 -2.4 -5.61881 | TTGGTTTTATCAATG GCGG CAG CGGC TTTTTCTTTTTCCAC flgK 1733407 - 1731746 - | flagellar hook-associated protein FlgK TERM 2232 1733119 - 1733133 + g 81 -8.6 -4.24342 | overlap 1733107 TATCGGCCAGCAGGT TGTCGA TTT TCGACA TTTGTTCATAGCGCG flgJ 1734422 - 1733472 - | peptidoglycan hydrolase TERM 2233 1733903 - 1733914 + g 74 -7.2 -4.20516 | opp_overlap 1733902 CCAGAATCAGATGAT GCGG CACC CCGC TTTGTTCGCTGGCCA TERM 2234 1733972 - 1734004 + g 100 -21.3 -4.24606 | opp_overlap 1733949 GAAAGTCTTTACTGT CGCCGGAGAGCGGCG CAT CGCTGCTGTCCGGCG TTTTCGGTATGGCTT flgI 1735519 - 1734422 - | flagellar basal body P-ring protein flgH 1736229 - 1735531 - | flagellar basal body L-ring protein TERM 2235 1736204 - 1736220 + g 70 -2.9 -4.75776 | overlap 1736207 1736208 AGGGCCATAACTGGG TAAGCGT GAA GCGCGTA TTTTTGCATTACCTT TERM 2236 1736281 - 1736250 - R 75 -11.4 -3.09004 | overlap 1736247 TCATCTTCAAAATCA GGGAGCCGGTGGCG TATC CCCCACCGGCGGCC CCTTAGAGTTGCGTC flgG 1737066 - 1736284 - | flagellar basal body rod protein FlgG flgF 1737835 - 1737080 - | flagellar basal body rod protein FlgF TERM 2237 1737741 - 1737700 - G 74 -11.5 -3.18507 | gap 1 AAGAGAGGCCATCAA CGGGCAC-CGCGCGTAGC GCGTTAA GCTGCGCGCGAAAGCCCG GCGTTGAGGCATTAG flgE 1739067 - 1737856 - | flagellar hook protein FlgE TERM 2238 1738210 - 1738222 + g 85 -9.1 -4.45544 | overlap 1738200 GCTCACCAGGTCGCC CGGCT TAT AGCCG TTTTGATTGGTGGCG flgD 1739792 - 1739094 - | flagellar basal body rod modification protein flgC 1740208 - 1739804 - | flagellar basal body rod protein FlgC flgB 1740628 - 1740212 - | flagellar basal body rod protein FlgB TERM 2239 1740711 - 1740701 - H 71 -6.8 -4.1552 | TATCGCCGGAATAAA CGCA AAA TGCG TCGCTATTTATTGCG TERM 2240 1740809 - 1740819 + G 74 -8.2 -3.92324 | overlap 1740807 TTAAAACGAGGATTC GCCG TGG CGGC TTTGCTGTTCAGCCC TERM 2241 1741379 - 1741366 - g 77 -8.1 -4.07568 | overlap 1741348 CGCCGTCGCGCAAAA TGCGC GCGT GCGCA TGACATCGGGTCAAA flgA 1740785 - 1741444 + | flagellar basal body P-ring biosynthesis protein FlgA TERM 2242 1741643 - 1741618 - g 78 -2.5 -5.24129 | gap 1, overlap 1741633 CGCCGGTACAAAAAA CGCGTCAGGA AAAAACG TCC-GCCGCG ACGAGCGCCAGCGTA TERM 2243 1741646 - 1741633 - g 81 -3.8 -5.14563 | overlap 1741618 CGCGTCAGGAAAAAA CGTC CGCCGC GACG AGCGCCAGCGTAACG flgM 1741536 - 1741829 + | anti-sigma28 factor FlgM TERM 2244 1742099 - 1742087 - g 76 -3.3 -5.1101 | CGATTACCGAAAAAA CGCAG CAT CTTCG CGACCTCAACCAGCA flgN 1741834 - 1742256 + | flagella synthesis protein FlgN TERM 2245 1742305 - 1742332 + T 71 -10.7 -2.64472 | gap 1, opp_overlap 1742317, overlap 1742301 CCTGAATGCCTTGTA G-GCCTGATAGC ACAGC GCTATCAGGCAC TGAATTTACGCCGTC mviN 1743912 - 1742338 - | virulence factor MviN TERM 2246 1743766 - 1743754 - G 90 -6.2 -5.28826 | overlap 1743742 AAACGCCACAAAAAA GGCG TCGGT CGCC ATCCCTGCGCCAAAA mviM 1745100 - 1744177 - | putative virulence factor MviM yceH 1745749 - 1745102 - | hypothetical protein TERM 2247 1745387 - 1745412 + g 81 -11.8 -3.53012 | opp_overlap 1745376 1745402 TTCATGCATCCGCGA CGCCCGGCTA CGCAAC TCGCCGGGCG TTTGCGCGCCGCGCA rimJ 1746369 - 1745785 - | ribosomal-protein-S5-alanine N-acetyltransferase yceL 1746606 - 1747814 + | multidrug resistance protein MdtH TERM 2248 1748027 - 1748015 - g 74 -7.7 -4.10161 | GATGATTGGTCAAAA GATGG TGC CCATC CTGCAAAAAGATGAT grxB 1747878 - 1748525 + | glutaredoxin 2 TERM 2249 1748535 - 1748557 + F 100 -10.6 -4.77925 | opp_overlap 1748526 ATCTAACGCCCGCCA GGCGGCAA CCCTTTC TTGCCGCC TTTTTCAGCTTTTTT TERM 2250 1749218 - 1749233 + F 100 -11.8 -5.47218 | CCAATTGATTTCGGA GGGCGC GCTC GCGCCC TTTTTTTACGTGCAA TERM 2251 1749770 - 1749780 + G 81 -8.2 -4.37092 | overlap 1749769 GTTGATATCTTCGAT CGCG AAG CGCG TTTTATCGACACCGT pyrC 1749314 - 1750360 + | dihydroorotase dinI 1750434 - 1750679 + | DNA damage-inducible protein I TERM 2252 1750706 - 1750721 + F 100 -11.8 -5.63517 | CAGTGATGTATGTTT GCCGGG TCGC CCCGGC TTTTTTATTTGCGCA bssS 1750969 - 1751223 + | biofilm formation regulatory protein BssS TERM 2253 1751247 - 1751262 + F 71 -10.4 -2.73799 | overlap 1751244 1751243 GCTCCCCCTCTCTCA GGCACC GTAA GGTGCC TCACTTATTTCTGGC TERM 2254 1751725 - 1751744 + G 80 -12.2 -3.36694 | overlap 1751722 GCCGGAAATTCGCGT GCCCGATA ATTA TATCGGGC TGTTTGAAGCTGACT TERM 2255 1752218 - 1752234 + G 71 -7.9 -3.96216 | opp_overlap 1752218 TTCCTGCGTAACGTA CTGCCGG GTA TCGGCGG TTGTTTACATGGGGC solA 1751336 - 1752454 + | N-methyltryptophan oxidase TERM 2256 1752460 - 1752478 + F 83 -9.5 -4.1822 | TAGCCAATAATTTGT CGGCCCC GTAAA GGGGCTG TTTATTAAGGTAAGC yceO 1752495 - 1752608 + | hypothetical protein yceJ 1752871 - 1753443 + | putative cytochrome TERM 2257 1753645 - 1753634 - g 85 -2.2 -5.52384 | overlap 1753636 TTTTGACGAAAAAAA TCCG TCGG CAGA CAAAGTGAACGTGAC yceI 1753440 - 1754015 + | hypothetical protein TERM 2258 1754025 - 1754064 + T 79 -12.1 -3.13403 | opp_overlap 1754028, overlap 1754023 1754028 AAGTAACGCCTGGCG AAATGCCGGATAGCGGC CTTTAC GCCGCTATCCGGCAAAA TATTACTCAGCCGGA TERM 2259 1754061 - 1754028 - T 100 -22.6 -3.53761 | opp_overlap 1754028 1754025 1754023 TAACGCCTGGCGAAA TGCCGGATAGCGGC CTTTAC GCCGCTATCCGGCA AAATATTACTCAGCC yceA 1755119 - 1754067 - | hypothetical protein htrB 1755339 - 1756259 + | lipid A biosynthesis lauroyl acyltransferase TERM 2260 1756284 - 1756265 - f 78 -12.2 -2.64616 | opp_overlap 1756265 GCGCTATTGACAGGA TTGCAGCC GTCA GGCTGCAA TTTTTCCCCTCTTTT TERM 2261 1756265 - 1756284 + F 100 -12.2 -4.69464 | opp_overlap 1756265 GCGCTATTGACAGGA TTGCAGCC GTCA GGCTGCAA TTTTTCCCCTCTTTT yceE 1756414 - 1757628 + | drug efflux system protein MdtG msyB 1757710 - 1758084 + | hypothetical protein yceK 1758312 - 1758085 - | hypothetical protein TERM 2262 1758338 - 1758356 + r 93 -10.3 -4.62783 | opp_overlap 1758338 ATTTCACTATAAAAA TACCGGC ATCAC GCCGGTA TTTTTCACCTCACTC TERM 2263 1758356 - 1758338 - R 100 -11 -4.91511 | opp_overlap 1758338 ATTTCACTATAAAAA TACCGGCA TCA CGCCGGTA TTTTTCACCTCACTC mdoH 1760929 - 1758386 - | glucosyltransferase MdoH TERM 2264 1759931 - 1759956 + g 73 -6.1 -4.37711 | opp_overlap 1759942 CTGATTGCCCCAGCG GCGGCAAAAAT CGTC AATATTGCCGC TTTTGCGTTTCATAC TERM 2265 1760517 - 1760542 + g 72 -3.9 -4.7497 | opp_overlap 1760517, overlap 1760518 ATTAACAAAATATAG CGGCGTATAGT GCCG ACGGTACGCCA TTTTTGCTCGCTCGC TERM 2266 1760822 - 1760859 + g 77 -8.6 -4.09685 | gap 3, opp_overlap 1760814, overlap 1760827 CGAGTAAGTCCGATG CTCGGCATCCAGCGCC-TG ATG CACGGCGC-GGATGTC-AG TTTTCGGCAATGCCG mdoG 1762457 - 1760922 - | glucan biosynthesis protein G TERM 2267 1762739 - 1762757 + G 70 -3 -4.70772 | overlap 1762742 CTTATATGAGCTCTG TACCCGCG CCG CGCGAATA TTTTCTTGACTCTAT mdoC 1762729 - 1763883 + | glucans biosynthesis protein ymdC 1765387 - 1763900 - | hypothetical protein TERM 2268 1763944 - 1763974 + gT 83 -8.2 -4.42464 | opp_overlap 1763961 CCGCCAACCGTACCA GAACTCGCTGCCAG AAA CGCGTAGCGGGTTC TTTCTTTAACACCTT TERM 2269 1764096 - 1764081 - GT 74 -7.6 -4.07568 | opp_overlap 1764073 TGGCTCTGCGTAAAA CGCTTA TGAA TAAGCG TCGCCAGCGTTTCAC TERM 2270 1764635 - 1764647 + gT 70 -9.1 -3.31144 | opp_overlap 1764632 1764633 1764619, overlap 1764624 1764622 ATCCGCCATAAACTG GCTGG TTT CCAGC TTATGCAGATAACGG TERM 2271 1765303 - 1765317 + gT 77 -7.8 -4.36914 | ATAGCGGTTCAACGG CACGCT CCA GGCGTG TTTTATCAGGCAGGG SPA1704 1765862 - 1765323 - | hypothetical protein ymdA 1766271 - 1765951 - | hypothetical protein csgC 1766729 - 1766403 - | putative autoagglutination protein TERM 2272 1766749 - 1766766 + r 90 -6.9 -5.4505 | opp_overlap 1766750, overlap 1766750 TCCTCCCGAAAAAAA ACAGGGC TTAC GCCCTGC TTTTTTATTAGCGCA TERM 2273 1766765 - 1766750 - R 100 -10.4 -5.75342 | opp_overlap 1766749 1766750 CCTCCCGAAAAAAAA CAGGGC TTAC GCCCTG CTTTTTTATTAGCGC TERM 2274 1766750 - 1766765 + r 84 -10.4 -3.86307 | opp_overlap 1766750, overlap 1766749 CCTCCCGAAAAAAAA CAGGGC TTAC GCCCTG CTTTTTTATTAGCGC csgA 1767246 - 1766791 - | cryptic curlin major subunit csgB 1767743 - 1767288 - | curlin minor subunit TERM 2275 1768173 - 1768161 - H 72 -4.9 -4.60317 | ATATAATAATTAAAA TGATT AAA AATCA ATGAATTATTATAAT TERM 2276 1768359 - 1768372 + H 73 -2.5 -5.24799 | opp_overlap 1768359 AAAAACAGTTAAAAG TATTT TCGT AAATA TTTTTCTCTTTCTGG TERM 2277 1768755 - 1768734 - g 73 -5.3 -4.62471 | opp_overlap 1768734 TTTAAGCCGCAAAAA CAATAATAT AAAA ACATTATTG TTAAATACCCCTGAC csgD 1768498 - 1769148 + | DNA-binding transcriptional regulator CsgD csgE 1769153 - 1769548 + | curli assembly protein CsgE csgG 1770018 - 1770851 + | assembly/transport component in curli production TERM 2278 1770865 - 1770885 + T 100 -14 -5.86976 | opp_overlap 1770865 GATGAATACGACAAA GCGTGGGG AAGAA CCCCACGC TTTTTTATTTTGTGA TERM 2279 1770885 - 1770865 - T 100 -14 -4.07455 | opp_overlap 1770865 GATGAATACGACAAA GCGTGGGG AAGAA CCCCACGC TTTTTTATTTTGTGA ycdZ 1771420 - 1770890 - | hypothetical protein TERM 2280 1771082 - 1771072 - G 74 -3.2 -4.87892 | CCGGAACAAAAGAAA GCAA TAG CTGC TTTGCCTGGATACAC ycdY 1772027 - 1771473 - | hypothetical protein ycdX 1772788 - 1772051 - | putative hydrolase TERM 2281 1772185 - 1772151 - G 80 -8.7 -4.08216 | gap 1, opp_overlap 1772141 CGATCTTCCGGAAAA TTCACCGCAT-CCAGA ATTT TCCGGCATTCGGTGAA ATCGCCAAGCGTAAA TERM 2282 1772866 - 1772851 - R 86 -11.8 -3.64703 | opp_overlap 1772851, overlap 1772825 CGTTTTTTAGCGAAA CCCGGC CCGC GCCGGG TTGATGTCAATATCC TERM 2283 1772851 - 1772866 + r 79 -11.8 -3.28912 | opp_overlap 1772825 1772851 CGTTTTTTAGCGAAA CCCGGC CCGC GCCGGG TTGATGTCAATATCC ycdW 1773811 - 1772873 - | putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region TERM 2284 1774140 - 1774178 + r 74 -11.3 -2.87931 | gap 1, opp_overlap 1774147 1774149, overlap 1774149 CCTCACCGCCATATT TAAG-AAAGAGCTCGTAC GAAA GTACGGGCTTTTTGCTTA TATGTGACCCGTCCA TERM 2285 1774149 - 1774168 + r 100 -10 -4.9755 | opp_overlap 1774149 1774147, overlap 1774140 CATATTTAAGAAAGA GCTCGTAC GAAA GTACGGGC TTTTTGCTTATATGT yjhC 1775389 - 1774286 - | putative oxidoreductase TERM 2286 1774577 - 1774590 + g 81 -2.4 -5.41746 | overlap 1774569 CGCCTGGCTTTCATG CACA AGAAAG TGTG TTTTTTTGCCCGCTT SPA1719 1776683 - 1775403 - | putative sialic acid transporter SPA1720 1777658 - 1776966 - | putative secreted protein TERM 2287 1777738 - 1777720 - H 72 -6.1 -4.25056 | TATTTTATTAATAAA TTACCAT CACAC ATGGTAA AGGAGGTTACAGACG TERM 2288 1778529 - 1778541 + H 88 -5.5 -5.47218 | GCTATAAACCTGCAA CGGTG ATT CACTG TTTTTTTCCCTACGC TERM 2289 1779437 - 1779410 - g 71 -6.3 -4.35518 | gap 1 AAGTGTACACGAAAA CGGTGGGC-TGA TTGTC TCATGCCAACCG GTACCAGGCAGCCCT TERM 2290 1779831 - 1779868 + G 77 -11.3 -3.58343 | opp_overlap 1779829 ATTGGTACAACACTG TCTGGCTATACCGGC CCCATCAC GCCGGTTGAGCCAGA TTTGGCAATGGTGAC SPA1722 1779369 - 1780049 + | N-acetylmannosamine-6-phosphate 2-epimerase TERM 2291 1780223 - 1780244 + F 79 -8.7 -4.24948 | CTGGGCATCACCATT GGTGGAGCA TAAA TGCTCTGCC TTTTACATCTCATGA TERM 2292 1781647 - 1781661 + G 74 -2.8 -4.86731 | GGCCAATGACCGGTC TGTTCA TGC TGGGCA TTTTCTTTAAACGAG SPA1723 1780386 - 1781882 + | putative sodium/glucose cotransporter SPA1724 1782168 - 1783049 + | putative transcriptional regulator TERM 2293 1783139 - 1783116 - T 95 -14.6 -3.58905 | opp_overlap 1783109, overlap 1783120 ACGCTTTATAGACAA CAAAGCCCGG TCTC CCGGGCTCTG AAAGTCAATGCTATA TERM 2294 1783135 - 1783120 - T 100 -11.8 -4.42974 | opp_overlap 1783109, overlap 1783116 TTTATAGACAACAAA GCCCGG TCTC CCGGGC TCTGAAAGTCAATGC phoH 1784009 - 1783155 - | hypothetical protein TERM 2295 1783197 - 1783187 - G 71 -8.2 -3.85698 | GCGTTCGCTGACAAA GCGC CGA GCGC ACGCAGTCGTCTTTG TERM 2296 1784030 - 1784045 + r 74 -5.4 -4.56597 | overlap 1784021 AGGGTTGGCTTCCTT GTAAGC CTTA GCTTGC TTTTTGAAACGACGC TERM 2297 1784793 - 1784768 - R 90 -15.5 -2.66964 | gap 1, opp_overlap 1784763, overlap 1784765 GGACTTATCAGAGGA CCAGGCAGGCGT ATA ACGCC-GCCTGG TAAAATATGTCCGAT TERM 2298 1784830 - 1784799 - R 87 -10.2 -4.07568 | opp_overlap 1784796 1784795 1784799, overlap 1784801 CGCCGCCTGGTAAAA TATGTCCGATGGCA ATAA TGCTATCGGACATG TCGGTTATTCCGCCT TERM 2299 1784799 - 1784830 + r 86 -14.6 -2.65808 | opp_overlap 1784799 1784801, overlap 1784796 1784795 CGCCGCCTGGTAAAA TATGTCCGATGGCA ATAA TGCTATCGGACATG TCGGTTATTCCGCCT TERM 2300 1784828 - 1784801 - R 88 -12.8 -3.63744 | opp_overlap 1784799 1784796 1784795, overlap 1784799 CCGCCTGGTAAAATA TGTCCGATGGCA ATAA TGCTATCGGACA TGTCGGTTATTCCGC putP 1786343 - 1784835 - | sodium/proline symporter (proline permease) TERM 2301 1786230 - 1786212 - G 70 -6.6 -4.19371 | overlap 1786201 TAAAGCCGTAACAAA CGGCCCCA GAC TGCGACCG CCAAGAATATAGTCA TERM 2302 1786914 - 1786902 - g 74 -7.7 -4.1585 | overlap 1786905 GGACAAGCTGGAAAA TAGCG ATA CGCTA CCGGAGCTACCTGCG TERM 2303 1789154 - 1789130 - g 71 -10 -3.55444 | gap 1, opp_overlap 1789139 TTTTTACCGGCCAAA TCGCC-GCCGC GCTG GCGGCAGGCAA CAGCGTTCTGGCGAA TERM 2304 1790704 - 1790682 - g 71 -9.8 -3.59979 | TTCGCTGAGCGTAAA CACTGCCGCC GCT GGCGGTAATG CCAGCCTGATGACAA putA 1786765 - 1790727 + | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 2305 1790744 - 1790761 + F 93 -9.1 -4.7373 | opp_overlap 1790744 ACTGTGGTTAATTAA GGCTCCG TCAA TGGAGCC TTTTTACTCGCGTCA SPA1728 1790786 - 1791181 + | putative secreted protein ycdC 1791816 - 1791178 - | putative transcriptional regulator TERM 2306 1791376 - 1791393 + g 74 -3.4 -4.84527 | gap 1 CCCGCTGTGCACCCA TCCG-GC AATCA GCGCGGA TTTTTCATCTATCAA TERM 2307 1791892 - 1791875 - R 100 -14.1 -5.72622 | opp_overlap 1791891 CTTATAAACAAAAAA CCGCCGG AAAT CCGGCGG CGGTGGCGCATGACG ymdF 1792119 - 1791952 - | hypothetical protein wrbA 1792504 - 1793100 + | TrpR binding protein WrbA yccJ 1793121 - 1793348 + | hypothetical protein TERM 2308 1793376 - 1793355 - T 100 -15.1 -4.28791 | opp_overlap 1793350 1793346, overlap 1793356 AACGTATAACACAAA CGCCCCCGC CTGC GCGGGGGCA TACGGCTATTTTGCG TERM 2309 1793375 - 1793356 - T 100 -16.4 -3.1619 | opp_overlap 1793350 1793346, overlap 1793355 ACGTATAACACAAAC GCCCCCGC CTGC GCGGGGGC ATACGGCTATTTTGC agp 1794623 - 1793382 - | glucose-1-phosphatase/inositol phosphatase TERM 2310 1794731 - 1794752 + r 82 -12.9 -3.03903 | opp_overlap 1794726 1794725 TACAGTAAACGCGTT AGCGCCGGG AAAC CCCGGCGCA TATTCAGAACGTTTT scsD 1795262 - 1794756 - | secreted protein, suppressor for copper-sensitivity D TERM 2311 1795250 - 1795223 - G 77 -4.8 -4.84359 | gap 1 GGAGCGCCAGAAAAA CCGCGGC-TTCAC GCA GCCAACGCCGCAG TTTACCCGCCATTGG TERM 2312 1795262 - 1795275 + r 83 -4.5 -5.27335 | overlap 1795263 GCAGTTTACCCGCCA TTGGC AGCC GCCAG TTTTTCTTTCACCAC scsC 1795875 - 1795252 - | secreted protein, suppressor for copper-sensitivity C precursor TERM 2313 1796473 - 1796436 - R 90 -14.1 -3.35813 | overlap 1796438 1796460 GCCTAGCGCAAGGAA CAGCCCCCACAGCGTCG GCAA CGACGCCGTGAGCGCCA CGGCGACCGCCGTGC TERM 2314 1796471 - 1796438 - R 100 -16.7 -3.24825 | overlap 1796436 1796460 CTAGCGCAAGGAACA GCCCCCACAGCGTCG GCAA CGACGCCGTGAGCGC CACGGCGACCGCCGT TERM 2315 1796478 - 1796460 - R 78 -12.4 -2.71144 | overlap 1796438 1796436 CAGCGTCGGCAACGA CGCCGTGA GCG CCACGGCG ACCGCCGTGCCCAGA TERM 2316 1796632 - 1796621 - R 71 -3.6 -4.74103 | GCCTGAACTCAAAAA GCCC GAAC AGGC TGGCGCTAAACAACA TERM 2317 1796937 - 1796953 + r 71 -7.9 -3.96148 | opp_overlap 1796936, overlap 1796951 1796952 TTGCCAGAAAGGTAG CGCCGCA TTG TCCGGCG TTTGTGCTGGCGCAG TERM 2318 1797412 - 1797379 - R 70 -9.5 -3.11326 | gap 1 GATAACGTCAACACA CCGCGCAAGGT-CGCC GGC GGCGTACCGCGCACGA TCATCGGAAAGGTCA TERM 2319 1797543 - 1797531 - R 72 -10.5 -2.89564 | TTTTCAGGCGATAGA GGGCG CCA CGCCC CCTTCCCCCGGCGCG scsA 1798169 - 1797807 - | membrane protein, suppressor for copper-sensitivity A TERM 2320 1798814 - 1798796 - g 74 -7.4 -4.1552 | overlap 1798806 TATTCCTGGAAGAAA CGCTGG AAGAGCA CCAGCG TACGATTAGCTATTC cbpA 1798405 - 1799325 + | curved DNA-binding protein CbpA yccD 1799325 - 1799630 + | chaperone-modulator protein CbpM TERM 2321 1799650 - 1799679 + F 82 -11.4 -3.64703 | gap 1, opp_overlap 1799651, overlap 1799651 CGATAAAGGCAATAA ACCGAGGGTGGGC TTTCT GCCCACCC-CGGA TTTACATGCACCCGG TERM 2322 1799651 - 1799678 + F 87 -14.9 -2.78679 | gap 1, opp_overlap 1799651, overlap 1799650 GATAAAGGCAATAAA CCGAGGGTGGGC TTTCT GCCCACCC-CGG ATTTACATGCACCCG TERM 2323 1799678 - 1799651 - f 100 -14.9 -4.30933 | gap 1, opp_overlap 1799651 1799650 GATAAAGGCAATAAA CCGAGGGTGGGC TTTCT GCCCACCC-CGG ATTTACATGCACCCG SPA1740 1800284 - 1800646 + | hypothetical protein TERM 2324 1801004 - 1801034 + T 79 -10.4 -3.57462 | opp_overlap 1800976 1800974 1800975 1801002 1801008, overlap 1801005 1801008 CTGATCGCCAAAAGC ATAACGGGCTGACA TCA TGTCAGCCCGTGGG TTTACCCCTGCCCTG TERM 2325 1801005 - 1801033 + T 83 -13.9 -2.74263 | opp_overlap 1800976 1800974 1800975 1801002 1801008, overlap 1801004 1801008 TGATCGCCAAAAGCA TAACGGGCTGACA TCA TGTCAGCCCGTGG GTTTACCCCTGCCCT TERM 2326 1801008 - 1801030 + T 100 -17.8 -2.64803 | opp_overlap 1800976 1800974 1800975 1801008 1801002, overlap 1801005 1801004 TCGCCAAAAGCATAA CGGGCTGACA TCA TGTCAGCCCG TGGGTTTACCCCTGC TERM 2327 1801030 - 1801008 - T 100 -17.8 -3.68359 | opp_overlap 1801005 1801004 1801008, overlap 1800976 1800974 1800975 1801002 TCGCCAAAAGCATAA CGGGCTGACA TCA TGTCAGCCCG TGGGTTTACCCCTGC SPA1741 1801992 - 1801054 - | hypothetical protein TERM 2328 1801243 - 1801256 + g 72 -3.8 -4.74103 | GTGATGCGACGCAAT CGCT TCAGCC AGCG TTTTTCCGTTGCCAA TERM 2329 1801432 - 1801412 - G 71 -6.2 -4.25104 | gap 1 CCCTGGGTATCAAAA CGGT-AAGC AAAC GCTTCACCG TCCGGAAAAGGGGAA hpaA 1802902 - 1802006 - | 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein TERM 2330 1802796 - 1802762 - G 86 -6.5 -5.0538 | gap 1, overlap 1802763 GTGCATTTGAAAAAA CTGGTCGTGGCGATGC GCCT GCAT-ATCACGACCAA AGAAATCCGCCATAC hpaX 1804288 - 1802912 - | putative 4-hydroxyphenylacetate permease TERM 2331 1803694 - 1803673 - G 73 -5.1 -4.65747 | overlap 1803683 TAATGCCTAACAAAA CTGACGGAA ATCC TTCCAACAG GAATAACCACTGCCA hpcH 1805152 - 1804361 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 2332 1804435 - 1804406 - G 77 -11.4 -3.53012 | gap 1, opp_overlap 1804418 TTTTTCTGCGCCAAA GCGCGCCGC-CAG CGCCT CTGCGCCGCGCGC CAGCAGCGTGGTGTC TERM 2333 1805110 - 1805122 + g 86 -10.5 -4.11773 | overlap 1805120 1805120 1805121 GCCACAAACCGATTT GCGGG CGC CCCGC TTTTAACGCGTCTTT TERM 2334 1805120 - 1805144 + g 72 -2.1 -4.88129 | overlap 1805110 1805120 1805121 1805137 GATTTGCGGGCGCCC CGCTTTTAACG CGT CTTTGAAAGCA TTTTTCATCGTTTTT hpcG 1805966 - 1805163 - | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase TERM 2335 1805888 - 1805909 + g 91 -10.1 -4.60889 | opp_overlap 1805882, overlap 1805890 1805902 GATAATCCAGCGACA CTGCGCGAA TCTG TTCGCGCTG TTTTTCAGCCTGATT TERM 2336 1805890 - 1805907 + g 82 -11.3 -3.91506 | opp_overlap 1805882, overlap 1805888 1805902 TAATCCAGCGACACT GCGCGAA TCTG TTCGCGC TGTTTTTCAGCCTGA hpcD 1806489 - 1806109 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase hpcB 1807350 - 1806499 - | 3,4-dihydroxyphenylacetate 2,3-dioxygenase hpaE 1808818 - 1807352 - | 4-hydroxyphenylacetate catabolism TERM 2337 1808509 - 1808525 + g 72 -3.5 -4.82667 | opp_overlap 1808502 CGAAGTTATGCGAGG CGCGCGG GAT CAGCACG TTTTTAGTCTGGTGA TERM 2338 1809118 - 1809128 + H 84 -8.2 -4.56775 | opp_overlap 1809100 1809097 GCCTATCGGCGTCAG GCCG TCG CGGC TTTTTACCCGCAGAT TERM 2339 1809778 - 1809802 + H 75 -11.5 -3.06696 | overlap 1809768 CCATCGCGACATTTC GCTTTAATCGC CGG GCGATAAAAGC TCTCTTCCGGCAGGC TERM 2340 1810761 - 1810742 - g 76 -2.9 -5.02074 | gap 1, overlap 1810744 TCACGCCCGAAAAAA CA-CAGCA ATTGA TGCTGCTG CTGGACGATCTTATT hpcR 1810378 - 1810818 + | homoprotocatechuate degradative operon repressor TERM 2341 1811317 - 1811301 - g 91 -12.3 -4.07568 | TCCGCGTGGCGAAAA GCGCAGA CGA TCTGCGC CAACAGCGTGATGCT hpaB 1811291 - 1812598 + | 4-hydroxyphenylacetate 3-monooxygenase hpaC 1812616 - 1813128 + | 4-hydroxyphenylacetate 3-monooxygenase coupling protein SPA1753 1813871 - 1813461 - | hypothetical protein copR 1814007 - 1814687 + | transcriptional regulatory protein YedW copS 1814680 - 1816044 + | histidine kinase TERM 2342 1817126 - 1817116 - f 79 -4.6 -5.14563 | GGCGGCAGTAAAAAA CGCG TTA CGCA ATCACTATCAGGGAA SPA1757 1817795 - 1817905 + | hypothetical protein SPA1758 1818076 - 1817906 - | hypothetical protein TERM 2343 1818042 - 1818030 - G 74 -3.4 -4.88228 | ATGGAATAGGAAAAA CGAA TGTTC TTCG TCACGGTCTTACTTG TERM 2344 1819715 - 1819695 - g 70 -5.4 -4.41633 | TATCTGGAAAAATAA CCAACATC ATAAA GATGGTGG CGAACCCTATAAACT TERM 2345 1820015 - 1819995 - g 72 -2.5 -4.95957 | opp_overlap 1819995, overlap 1819989 1819988 CAAAGTAATGAAAAA TTTATCACC AGA GGTGCTCAA TCTTTCCTATCAAAA sigD 1818409 - 1820094 + | cell invasion protein TERM 2346 1820330 - 1820302 - g 72 -11.7 -2.71731 | opp_overlap 1820320, overlap 1820304 TTTACGTCTTAACTA CACCAGCGCCG TCACTAT CGGCGCTGACG CAGACAATACTGCTT sigE 1820111 - 1820452 + | cell invasion protein SPA1761 1820782 - 1820462 - | putative inner membrane protein TERM 2347 1820571 - 1820589 + g 72 -2.4 -4.84527 | TCCTCTTTCTCATTT TGCTCT GTTTGCG GGAGCA TTTTTAGTGTGTAAG TERM 2348 1820609 - 1820621 + g 71 -4.8 -4.59109 | TAGTGTGTAAGTATT CCTG CTCAT CAGG TTTTTACGCCATCTA pipB 1821000 - 1821875 + | hypothetical protein pipA 1822098 - 1822778 + | hypothetical protein TERM 2349 1822907 - 1822879 - f 100 -9 -5.03145 | gap 1, opp_overlap 1822883 1822884, overlap 1822883 1822884 TAAGCGCCCAAAAAA CAAATGGGTTACC TTTC GGTAACCC-CTTG TTTAATCTGGCGGAA TERM 2350 1822904 - 1822883 - f 91 -8.7 -5.04249 | opp_overlap 1822883 1822884, overlap 1822879 1822884 CGCCCAAAAAACAAA TGGGTTACC TTTC GGTAACCCC TTGTTTAATCTGGCG TERM 2351 1822883 - 1822904 + F 76 -8.7 -4.04806 | opp_overlap 1822879 1822883 1822884, overlap 1822884 CGCCCAAAAAACAAA TGGGTTACC TTTC GGTAACCCC TTGTTTAATCTGGCG TERM 2352 1822884 - 1822903 + F 80 -12.2 -3.02402 | opp_overlap 1822883 1822879 1822884, overlap 1822883 GCCCAAAAAACAAAT GGGTTACC TTTC GGTAACCC CTTGTTTAATCTGGC TERM 2353 1822903 - 1822884 - f 88 -12.2 -3.61465 | opp_overlap 1822884 1822883, overlap 1822883 1822879 GCCCAAAAAACAAAT GGGTTACC TTTC GGTAACCC CTTGTTTAATCTGGC yccA 1823397 - 1824056 + | hypothetical protein TERM 2354 1824072 - 1824097 + F 91 -7.5 -5.15634 | overlap 1824076 TCGACATTCCCCTCT TCCAGCCCTGC TTAT GCAGGGCTTTA TTTTTTGCTACACTG TERM 2355 1824076 - 1824093 + F 100 -12.7 -5.0917 | overlap 1824072 CATTCCCCTCTTCCA GCCCTGC TTAT GCAGGGC TTTATTTTTTGCTAC TERM 2356 1824408 - 1824377 - g 84 -5.8 -5.06414 | TTCGGCGAAGAAAAA GGCAACAGCCGCTA TCTG TATCGTCTGTTCCC GAAAGGCCCGGCAAA yccK 1824143 - 1824472 + | sulfurtransferase TusE yccX 1824750 - 1824469 - | putative acylphosphatase SPA1768 1825578 - 1824799 - | AraC family transcription regulator yccW 1826366 - 1827577 + | hypothetical protein yccV 1827635 - 1827952 + | hypothetical protein TERM 2357 1827957 - 1827994 + T 73 -4.1 -4.86731 | opp_overlap 1827965, overlap 1827958 1827964 1827965 TACGTAACTGATTGT ATGTAAAAGGCCGGAGA GCGA TATCCGGCCATTTAAAC TTTTATTTCGCCAGC TERM 2358 1827986 - 1827965 - T 83 -10.1 -4.1899 | opp_overlap 1827965 1827964 1827958 1827957 TGATTGTATGTAAAA GGCCGGAGA GCGA TATCCGGCC ATTTAAACTTTTATT SPA1772 1828410 - 1827997 - | hypothetical protein TERM 2359 1828680 - 1828708 + G 70 -6.6 -4.15044 | overlap 1828682 GAGGTTGATCTGCTG GTGCTGGACGGC AAAAA GGTGTCCAGCTC TTTATTACGCGGCGC TERM 2360 1828920 - 1828935 + G 77 -8.2 -4.07568 | opp_overlap 1828893 TCGCATTTTAACGCG GCGCCG CGTC TGGCGC TTTTGGACGGCGACG yccT 1828584 - 1829246 + | hypothetical protein mgsA 1829341 - 1829799 + | methylglyoxal synthase TERM 2361 1829810 - 1829800 - T 74 -8.2 -3.9122 | opp_overlap 1829805 1829806, overlap 1829801 GAGCGCCTGAAATAA CCGC TAC GCGG GCGGGATGCTATACC TERM 2362 1829805 - 1829833 + T 95 -14.5 -3.61764 | opp_overlap 1829800 1829801, overlap 1829806 1829826 CCTGAAATAACCGCT ACGCGGGCGGGAT GCT ATACCGCCCGCGC TTTAGGGCTTCCTCG TERM 2363 1829806 - 1829832 + T 100 -18 -2.76737 | opp_overlap 1829800 1829801, overlap 1829805 1829826 CTGAAATAACCGCTA CGCGGGCGGGAT GCT ATACCGCCCGCG CTTTAGGGCTTCCTC helD 1831889 - 1829835 - | DNA helicase IV TERM 2364 1829997 - 1829983 - G 77 -8.6 -4.08216 | TCAGCGTCCGGAAAA TCCTCA ACC TGAGGA AGAAGCGCACTTTCC TERM 2365 1830912 - 1830932 + g 78 -2.3 -5.28176 | overlap 1830913 CTCTTCCAGCCACTG ACGCCAGCC TTT GGCCTGCGC TTTTTTCTCGCTACA TERM 2366 1832433 - 1832413 - g 73 -8.9 -3.85698 | opp_overlap 1832418 1832418 TCGTCTCTGTAGAAA CCGCTCGCG CCG CGCGAGAAG CTAACGCGCGCCGCC TERM 2367 1832418 - 1832449 + G 70 -6.5 -4.21194 | gap 1, opp_overlap 1832413 1832438, overlap 1832418 TCTGTAGAAACCGCT C-GCGCCGCGCG AGAAGCTAA CGCGCGCCGCCG TTTTGAATGATCGGG yccF 1832013 - 1832459 + | hypothetical protein TERM 2368 1833433 - 1833445 + G 83 -10.5 -3.9281 | CGCTTGAACGTATGC GCGCC AGC GGCGC TTCTTTAGAGCTGCT TERM 2369 1833829 - 1833840 + G 75 -5.8 -4.64846 | overlap 1833815 1833814 TGGTAGGCGTTGCGA TCGG CCTG CCGA TTTTATGGTTTGTCC TERM 2370 1834050 - 1834061 + G 73 -5.8 -4.41348 | TGCGCTATCGCCTGG GCTG CGGT CAGC TTTATTTGGCCGGAC yccS 1832478 - 1834631 + | hypothetical protein yccR 1835223 - 1834618 - | hypothetical protein TERM 2371 1834646 - 1834683 + g 71 -10.6 -3.25823 | gap 2, overlap 1834647 AGCGAATGAGCCCAG TCGGCAAGCTCCTGGCGA CGAC TCGCCGGGAGC--GCCGC TTCATGTACGCCGAC TERM 2372 1834647 - 1834682 + g 81 -14.1 -2.55351 | gap 2, overlap 1834646 GCGAATGAGCCCAGT CGGCAAGCTCCTGGCGA CGAC TCGCCGGGAGC--GCCG CTTCATGTACGCCGA sulA 1835440 - 1835949 + | SOS cell division inhibitor TERM 2373 1836018 - 1836051 + F 78 -5.4 -4.80882 | gap 1, opp_overlap 1836027 1836039, overlap 1836027 1836039 GTGCTAACTTTTTTT TTGCG-AGAACGCTT GCCAG AAGCGGTTTCCGCAA TTTTTGCTGTACGAT ompA 1836306 - 1837358 + | outer membrane protein A TERM 2374 1837369 - 1837402 + T 83 -14.1 -2.64616 | gap 1, opp_overlap 1837378, overlap 1837370 1837378 CTTAAGTTTCCGTCT GA-TAAAAAACCCCGC GTC GCGGGGTTTTTTGCTC TGGTCTGGGTGACAA TERM 2375 1837370 - 1837400 + T 82 -13.4 -2.8655 | opp_overlap 1837378, overlap 1837369 1837378 TTAAGTTTCCGTCTG ATAAAAAACCCCGC GTC GCGGGGTTTTTTGC TCTGGTCTGGGTGAC TERM 2376 1837378 - 1837392 + T 100 -12.8 -5.23316 | opp_overlap 1837378, overlap 1837370 1837369 CCGTCTGATAAAAAA CCCCGC GTC GCGGGG TTTTTTGCTCTGGTC TERM 2377 1837392 - 1837378 - T 100 -12.8 -5.24129 | opp_overlap 1837378 1837370 1837369 CCGTCTGATAAAAAA CCCCGC GTC GCGGGG TTTTTTGCTCTGGTC ycbG 1837882 - 1837430 - | hypothetical protein TERM 2378 1837907 - 1837924 + H 72 -2.7 -5.04385 | AATGTTACCGTGTAA CTGTTAT CAGA ATATCAG TTTTTTAGCCATCTG lonH 1838068 - 1839828 + | hypothetical protein fabA 1839897 - 1840415 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 2379 1840498 - 1840468 - T 74 -8.2 -3.95219 | opp_overlap 1840471 1840475, overlap 1840459 1840475 TGCAAAGCCCATAAA GGCGAAACCTCCGC ACT GCGGAGGTTTCTTT TTCTAAAGAGACAGA TERM 2380 1840471 - 1840495 + T 100 -18.7 -4.82901 | opp_overlap 1840468 1840475, overlap 1840475 AAAGCCCATAAAGGC GAAACCTCCGC ACT GCGGAGGTTTC TTTTTCTAAAGAGAC TERM 2381 1840475 - 1840491 + T 100 -13.7 -4.96501 | opp_overlap 1840468 1840475, overlap 1840471 CCCATAAAGGCGAAA CCTCCGC ACT GCGGAGG TTTCTTTTTCTAAAG TERM 2382 1840491 - 1840475 - T 100 -13.7 -3.74347 | opp_overlap 1840475 1840471, overlap 1840468 CCCATAAAGGCGAAA CCTCCGC ACT GCGGAGG TTTCTTTTTCTAAAG rmf 1840682 - 1840515 - | ribosome modulation factor (protein E) TERM 2383 1840747 - 1840725 - R 71 -7.1 -4.16397 | overlap 1840737 1840738 GTGGAAAAGAAAACA GTGATTACA AAATG TGCAATCAC ACTACACGAATACCT TERM 2384 1840915 - 1840889 - R 100 -15.9 -4.94811 | opp_overlap 1840889 1840884 TCAAAAATAAAGAAA CCGCCTCAGGC GCACG GCCTGAAGCGG TTAAATTTACATTAC TERM 2385 1840889 - 1840915 + r 90 -13.7 -3.30781 | opp_overlap 1840889, overlap 1840884 TCAAAAATAAAGAAA CCGCCTCAGGC GCACG GCCTGAAGCGG TTAAATTTACATTAC ymbA 1841501 - 1840938 - | putative lipoprotein TERM 2386 1841420 - 1841431 + g 72 -2.2 -4.84311 | TTTGCGCTATCGGGA GCTG ATAA TAGC TTTTATTCTCTCCGC pqiB 1843138 - 1841498 - | paraquat-inducible protein B TERM 2387 1842000 - 1842018 + g 80 -8.8 -4.07568 | TCGACATACAGCGCC CCGGTCAC CAG GTTACCGG TTTTAAGCGAAGCGC pqiA 1844396 - 1843143 - | putative inner membrane protein uup 1846318 - 1844411 - | ABC transporter ATPase component TERM 2388 1844549 - 1844534 - G 80 -4.6 -5.00616 | overlap 1844535 GGGTTGGCTAAAAAA GGCCGC ATCC GCAACC TGCGCCTGTAGCGCT TERM 2389 1845007 - 1845022 + g 81 -11.8 -3.59979 | opp_overlap 1844998 1844999 CGGAAAGCGCGCGGA CGGGCG TCAT CGCCCG TTTGGGGTGAAACAG TERM 2390 1845209 - 1845229 + g 74 -9.7 -3.6608 | GCGCCCACTGTCAGC CTGAAGCTG TCC CAGCATCAG TTTCAGTAGCGTGGT ycbY 1848439 - 1846331 - | 23S rRNA m(2)G2445 methyltransferase TERM 2391 1847066 - 1847077 + g 83 -7.2 -4.59773 | opp_overlap 1847063 1847066 1847065 AATAATATCGAACAG GCGC TGCC GCGC TTTTTGCGCATCCAC SPA1790 1848538 - 1849647 + | hypothetical protein ycbW 1850186 - 1849644 - | hypothetical protein TERM 2392 1850066 - 1850044 - G 86 -6.8 -4.99035 | TCATCCACACAAAAA CCGGTCGGGC AAA ACGCGTCCGG CGTAAGCATTTTACG TERM 2393 1850333 - 1850304 - R 78 -5.7 -4.84918 | opp_overlap 1850304 TGGAGAAATATAAAA CAACCAGCGCC GGAAATAA AGCCCTGGTTG TCTGATAAAGGCTAA pyrD 1851362 - 1850352 - | dihydroorotate dehydrogenase 2 TERM 2394 1851542 - 1851514 - R 100 -9.6 -5.40072 | gap 1, opp_overlap 1851512 1851514, overlap 1851516 CGTCCGGCAAAAAAA TACCCGGC-AGCG CTAA CGCTTACCGGGCA TGTCTTACCTCTTTA TERM 2395 1851540 - 1851516 - R 87 -10 -4.34482 | gap 1, opp_overlap 1851514 1851512, overlap 1851514 TCCGGCAAAAAAATA CCCGGC-AGCG CTAA CGCTTACCGGG CATGTCTTACCTCTT pepN 1854182 - 1851570 - | aminopeptidase N pncB 1854449 - 1855651 + | nicotinate phosphoribosyltransferase TERM 2396 1855663 - 1855689 + T 85 -12.3 -3.41745 | overlap 1855667 TTAACCATGCCTGTG CGAAGCGCCCG GAAAG TGGGCGCTTTG TTACTCTTCTGACCA TERM 2397 1855667 - 1855685 + T 87 -9.5 -4.34759 | overlap 1855663 CCATGCCTGTGCGAA GCGCCCG GAAAG TGGGCGC TTTGTTACTCTTCTG SPA1795 1857165 - 1855729 - | putative ion:amino acid symporter TERM 2398 1857129 - 1857118 - G 75 -5.8 -4.61353 | GACACACAAAAATAA TGGG CCAC CCCA TAGAAATTCAAAGAG TERM 2399 1857349 - 1857365 + r 75 -2.9 -5.1101 | overlap 1857350 1857350 GCATTAGGTTTATTA TGCGTAT AAA AAACGCG TTTTTTACATGCTGC SPA1796 1858625 - 1857411 - | diaminopropionate ammonia-lyase TERM 2400 1857690 - 1857679 - G 77 -4.4 -4.88918 | TCAGCGGAAATAAAA CAAC TGGT GTTG TCCCGAATAATAGGC TERM 2401 1859302 - 1859315 + G 79 -3.1 -5.13722 | overlap 1859297 GGCGGAATATGAAAC GCTTA CCCG TGAGC TTTTCTTTTCCTCAG SPA1797 1858943 - 1859404 + | putative transcriptional regulator TERM 2402 1859444 - 1859463 + F 74 -5.7 -4.6526 | CCTAAATTCTCAATT GTTCGCG AGCAGG TGCGAAC TTTTTACAGGTTTCT TERM 2403 1860010 - 1860054 + G 70 -9.3 -3.67597 | ACCAACCTGATTGGC GCGGTAGC-GCGCGTCCGCCA TACTC TGGCGCAGGCGCTGC-ATCGC TTCTTCGATGAGCAG TERM 2404 1860495 - 1860509 + G 75 -7.1 -4.52589 | GGATAAAGACGCTAT CGCTC GTCTG GAGCG TTTTGTCTCCACCGA asnC 1859605 - 1861005 + | asparaginyl-tRNA synthetase TERM 2405 1861024 - 1861040 + F 100 -13.7 -5.78622 | TTACGTCACACTCAG GGCCAGC TAT GCTGGCC TTTTTTTTCGCCTGA TERM 2406 1861052 - 1861062 + F 78 -5.4 -4.79352 | GGCCTTTTTTTTCGC CTGA ATG TCAG TTTTATTCTCAATAA TERM 2407 1861167 - 1861157 - f 72 -2.6 -5.04597 | opp_overlap 1861157 1861157 1861158, overlap 1861158 ATTTACACATAAAAA TTAA TCC TTAA TTTTATTGCGGATTA ompF 1861612 - 1862703 + | outer membrane protein F precursor TERM 2408 1862751 - 1862736 - f 89 -9 -4.58395 | opp_overlap 1862736 TTTATGCCTCAAAAA CAGGAC TTCG GTCCTG TTTTTTTATCTCTCT TERM 2409 1862736 - 1862751 + F 100 -9 -5.77988 | opp_overlap 1862736 TTTATGCCTCAAAAA CAGGAC TTCG GTCCTG TTTTTTTATCTCTCT TERM 2410 1863203 - 1863186 - g 71 -9.8 -3.55761 | overlap 1863167 1863166 CACGCACGGCGCAAA CGCCGG GCGGTA CCGGCG CGTTACGCATTGCCG TERM 2411 1863303 - 1863291 - g 71 -4.8 -4.5442 | GGCCGAACCACAAAA GCGT GTTTA ACGC TGCCGGCCTGGAAGT TERM 2412 1863371 - 1863410 + G 70 -9.2 -3.66556 | gap 1, opp_overlap 1863377 CTGGATTTTGAAGCG CTACA-AGCCAGCCTGAGC GAA GCACAGGCCGGCGATGTGG TTCTGTTCCACGGTT TERM 2413 1863403 - 1863377 - g 100 -15.8 -3.33261 | opp_overlap 1863371 TTTGAAGCGCTACAA GCCAGCCTGAGC GAA GCACAGGCCGGC GATGTGGTTCTGTTC aspC 1862888 - 1864078 + | aromatic amino acid aminotransferase TERM 2414 1864103 - 1864133 + T 93 -14.2 -3.50853 | opp_overlap 1864110, overlap 1864110 GACTGGCGTGACCGA TAAAAAAGCCTGCA CAT TGCAGGCTTTTTCA TTCTGCTTACCAGAC TERM 2415 1864110 - 1864126 + T 100 -12.3 -4.95876 | opp_overlap 1864110, overlap 1864103 GTGACCGATAAAAAA GCCTGCA CAT TGCAGGC TTTTTCATTCTGCTT TERM 2416 1864126 - 1864110 - T 100 -12.3 -5.28176 | opp_overlap 1864103 1864110 GTGACCGATAAAAAA GCCTGCA CAT TGCAGGC TTTTTCATTCTGCTT ycbL 1864787 - 1864140 - | hypothetical protein ycbK 1865363 - 1864815 - | hypothetical protein ycbB 1867470 - 1865623 - | hypothetical protein TERM 2417 1867703 - 1867688 - R 100 -11.8 -5.42975 | TCAGATAAAGAAAAA GGCGGC TTTC GCCGCC CCAGGCTAATGATAA TERM 2418 1867777 - 1867755 - R 70 -10.6 -2.52464 | opp_overlap 1867733 1867767 TGGCGGCGTAACCGA CTTATCCGGC CTT GCCTGATAAG CGAGGCGCCATCGGG mukB 1872281 - 1867815 - | cell division protein MukB TERM 2419 1869263 - 1869243 - G 81 -12.5 -3.07816 | GCTGTACTGACTTAA CTGCGCGGC ATG GCTGCGCAG CGCTTCGCGGGCGCG TERM 2420 1869296 - 1869318 + g 79 -7.6 -4.42238 | overlap 1869297 TACGCTCGGCTTCCG CCTGCTCCAG CCG CTGGCGCAGC TTTTCGTTGAGATCG TERM 2421 1869297 - 1869317 + g 74 -11.1 -3.2486 | overlap 1869296 ACGCTCGGCTTCCGC CTGCTCCAG CCG CTGGCGCAG CTTTTCGTTGAGATC TERM 2422 1869415 - 1869436 + g 70 -8.7 -3.72893 | gap 1, opp_overlap 1869414, overlap 1869420 GCCAGAGCAAAAGCC TGCTGGCGCG CGT CGCGCT-GCA TTTGCTGCGACCATG TERM 2423 1870865 - 1870888 + g 93 -4.4 -5.4505 | opp_overlap 1870864, overlap 1870868 CCTGCTCAAACTGAC TGTGCGCGGT TTGC GCCACGCTCA TTTTTTGTTCCAACG TERM 2424 1871636 - 1871626 - G 70 -6.8 -4.20367 | TCCGGCAATAAATAA TCGC GTA GCGA TCGGGTAATGGCGCT mukE 1872958 - 1872281 - | condesin subunit E mukF 1874288 - 1872966 - | condesin subunit F TERM 2425 1873120 - 1873093 - G 77 -11.3 -3.49568 | gap 1, opp_overlap 1873091, overlap 1873091 1873108 TGATCGATAACAATA CGCGC-CACGTC GAAAT GACGCGCGCGCG GGTATTGCGCCAGAT TERM 2426 1873410 - 1873439 + g 73 -8.7 -3.87815 | GGCGAAGACACGGTT TTTATCCATATCG ATCG CGGTACGGATAAA TTTATGCACGTGACG smtA 1875084 - 1874281 - | putative metallothionein SmtA TERM 2427 1875661 - 1875683 + G 70 -9.8 -3.44686 | overlap 1875659 GCGCGGGTGGCGCAG TCGCTGGGCG TAC CGCGTAGCGA TATTATTACGTTGGA TERM 2428 1875748 - 1875758 + G 71 -8.2 -3.80573 | opp_overlap 1875724 1875741 GTTAAGCAGGCCATC GGCG ACG CGCC TTTCCTGCTGGTAAC ycbC 1875220 - 1875996 + | hypothetical protein SPA1809 1876869 - 1875976 - | hypothetical protein TERM 2429 1876784 - 1876794 + g 74 -8.2 -4.05446 | opp_overlap 1876777 1876783 1876784 TATAATGACCACAAT GCGG AAT CCGC TTTCTCATTCACGCA TERM 2430 1876983 - 1876970 - R 70 -5.3 -4.45077 | GAAAAATGAGGAAAA TCGTA ACGG TACGA GAAAGCCGCCACTGA TERM 2431 1877038 - 1877074 + r 73 -10.9 -2.74371 | opp_overlap 1877035, overlap 1877024 1877036 TGCGCTATCATACCG CGCTGTTCATGACCGTC TAA GACGATCATGAACAGGA TCATGTTAACGCATT kdsB 1877826 - 1877080 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 2432 1877466 - 1877482 + g 74 -7.9 -4.08216 | overlap 1877467 GCGTCGCCATGCCAA CCTGGCG CTG CGCCAGA TTTTCCGCGACCTGG TERM 2433 1877467 - 1877481 + g 72 -11.4 -3.04715 | overlap 1877466 CGTCGCCATGCCAAC CTGGCG CTG CGCCAG ATTTTCCGCGACCTG ycaR 1878005 - 1877823 - | hypothetical protein ycaQ 1879289 - 1878057 - | putative cytoplasmic protein TERM 2434 1878434 - 1878380 - G 81 -12.8 -3.09671 | overlap 1878422 AGTCGAATGCGAAGA GCTGCGCTGCCCGCTTGCGATCCCAT ACC ACAGGATCGAAAGGCGACAGCACTGC GCTATGGGTCGCCTT TERM 2435 1878444 - 1878456 + g 73 -9.1 -3.90922 | CACTGCGCTATGGGT CGCCT TTA AGGCG TTATTTAGCGCCGGT TERM 2436 1879199 - 1879218 + g 78 -6.3 -4.68593 | opp_overlap 1879193 CAAGAACATCGCCAG GCAGCGC GTTACG GCGCGGC TTTTTCAATAGTCCC lpxK 1880310 - 1879333 - | tetraacyldisaccharide 4'-kinase TERM 2437 1879708 - 1879745 + g 80 -9.1 -4.08216 | gap 1 GGGGATTTCGCCCGC CCGGGCGACGCCGCCATT CAC GATAGCGGCGTC-TACGG TTTTCAGGCGACTGG TERM 2438 1880088 - 1880098 + g 70 -6.8 -4.07568 | CCACGCGCACGCCAC GCTG TTG CAGC TTTTCCACCAGCCAA msbA 1882055 - 1880307 - | lipid transporter ATP-binding/permease protein TERM 2439 1882714 - 1882697 - R 76 -7.7 -4.21194 | opp_overlap 1882696, overlap 1882700 GCTCATGACTCAAAA TAACGCC CTCC GGCGTCA GATTATGCCAGCGCA TERM 2440 1882711 - 1882700 - R 74 -7.2 -4.22883 | opp_overlap 1882696, overlap 1882697 CATGACTCAAAATAA CGCC CTCC GGCG TCAGATTATGCCAGC TERM 2441 1883068 - 1883054 - R 72 -8.5 -3.741 | overlap 1883052 TCAACAGGTAAAATA GCGCG GCTAA CGCGC GATCGGTCAGGTACC TERM 2442 1884563 - 1884533 - R 87 -11.3 -3.86897 | opp_overlap 1884541, overlap 1884534 1884541 CTGACGGCGTATAAA TGAAAAAAGCACC CTGAC GGTGCTTTTTTCG GGTTCAAGTTTTGCG TERM 2443 1884562 - 1884534 - R 87 -14.8 -2.91924 | opp_overlap 1884541, overlap 1884533 1884541 TGACGGCGTATAAAT GAAAAAAGCACC CTGAC GGTGCTTTTTTC GGGTTCAAGTTTTGC TERM 2444 1884555 - 1884541 - R 90 -7.1 -5.42514 | opp_overlap 1884541, overlap 1884534 1884533 GTATAAATGAAAAAA GCACC CTGAC GGTGC TTTTTTCGGGTTCAA TERM 2445 1884541 - 1884555 + r 87 -7.1 -5.09426 | opp_overlap 1884541 1884534 1884533 GTATAAATGAAAAAA GCACC CTGAC GGTGC TTTTTTCGGGTTCAA ihfB 1884870 - 1884586 - | integration host factor subunit beta TERM 2446 1884917 - 1884947 + r 85 -12.7 -3.33696 | gap 1, opp_overlap 1884923, overlap 1884919 1884923 TGCAGCCGTGAGATT G-ATTAAGGGCGGC CGTA GCCGCCCTTAGTGC TTGATTACAGGCCGA TERM 2447 1884919 - 1884944 + r 93 -15.5 -2.84098 | opp_overlap 1884923, overlap 1884917 1884923 CAGCCGTGAGATTGA TTAAGGGCGGC CGTA GCCGCCCTTAG TGCTTGATTACAGGC TERM 2448 1884923 - 1884940 + r 90 -14.1 -3.30554 | opp_overlap 1884923, overlap 1884919 1884917 CGTGAGATTGATTAA GGGCGGC CGTA GCCGCCC TTAGTGCTTGATTAC TERM 2449 1884940 - 1884923 - R 86 -14.1 -3.20382 | opp_overlap 1884923 1884919 1884917 CGTGAGATTGATTAA GGGCGGC CGTA GCCGCCC TTAGTGCTTGATTAC rpsA 1886699 - 1885026 - | 30S ribosomal protein S1 TERM 2450 1886525 - 1886535 + g 87 -8.2 -4.63527 | overlap 1886518 CCTGGATTTCCAGTT CGCC CTG GGCG TTTTTGAACTGCTCA cmk 1887496 - 1886813 - | cytidylate kinase ycaL 1888430 - 1887669 - | putative lipoprotein TERM 2451 1888331 - 1888365 + g 72 -3.7 -4.68593 | CTTTGTAGGCTGACA TGCCG-GAACTGGCGAT TAA ATTGCCA-TTCACGCCA TTTTTACATCCTGCC TERM 2452 1888478 - 1888463 - R 81 -3.3 -5.33785 | opp_overlap 1888463 AACTATTATAAAAAA CACAT AAATCA ATGTG TTAAATCATCAACAA aroA 1889856 - 1888573 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2453 1889409 - 1889390 - G 74 -7 -4.36914 | opp_overlap 1889389 TCGCCGCCGATAAAA CCGCCGCG CAGA CGCAGGGG CGGATAATTTTCCTG TERM 2454 1889909 - 1889889 - R 100 -10.4 -5.48623 | AAACAGAAATAAAAA CCCCACAG ACTGG CCGTGGGG ATGAAAAAAGAAACG serC 1891015 - 1889927 - | phosphoserine aminotransferase ycaP 1891893 - 1891201 - | hypothetical protein TERM 2455 1892241 - 1892228 - g 81 -3.7 -5.14563 | overlap 1892214 1892229 GGCGCGACCAAAAAA GCGGC GCTG GCCTC GGCGCTGGGCGAATA TERM 2456 1893644 - 1893675 + G 83 -5.7 -4.85599 | gap 1, opp_overlap 1893625 1893644 1893645 GCAGAGGCTGTAGAA GCCGCCAGCGCCGC GCTTA GCGGTGAAG-CGGC TTTTTATGGACTACC ycaO 1892030 - 1893790 + | hypothetical protein TERM 2457 1893862 - 1893842 - f 71 -10.4 -2.62184 | gap 1, opp_overlap 1893842 GGCTGCGTTATATTA CGGGG-CGC CTTT GCGGCCCCG TTTTATTTATTTTCA TERM 2458 1893842 - 1893862 + F 100 -10.4 -5.26247 | gap 1, opp_overlap 1893842 GGCTGCGTTATATTA CGGGG-CGC CTTT GCGGCCCCG TTTTATTTATTTTCA focA 1894195 - 1895052 + | formate transporter TERM 2459 1897052 - 1897041 - g 71 -7.2 -3.96148 | opp_overlap 1897041 GGTCGTGACCAGAAA GGCG CTGT CGCC TCTCTGACCTCCGTT pflB 1895112 - 1897394 + | formate acetyltransferase 1 TERM 2460 1897426 - 1897467 + F 72 -3.2 -4.9725 | opp_overlap 1897411 1897437, overlap 1897437 TACGCCATAAAAAGC GTACA-AAAAAAGGCTCCAT GTCA GTGGGGCCTTTTTAATG-AC TTTTTATATAAGCAT TERM 2461 1897437 - 1897456 + F 84 -7.8 -4.79667 | opp_overlap 1897437, overlap 1897426 AAGCGTACAAAAAAA GGCTCCAT GTCA GTGGGGCC TTTTTAATGACTTTT TERM 2462 1897456 - 1897437 - f 89 -4.9 -5.63504 | opp_overlap 1897437 1897426 AAGCGTACAAAAAAA GGCTCCA TGTCAG TGGGGCC TTTTTAATGACTTTT SPA1827 1898560 - 1898886 + | putative cytoplasmic protein pflA 1899005 - 1899802 + | pyruvate formate lyase-activating enzyme 1 TERM 2463 1899851 - 1899830 - T 86 -11.6 -3.53444 | opp_overlap 1899830 TTATCCGCTTTTAAA CGGCTACC CATGAC GGTAGCCG TTTTGCTGTCTGGGT TERM 2464 1899830 - 1899851 + T 100 -11.6 -4.39568 | opp_overlap 1899830 TTATCCGCTTTTAAA CGGCTACC CATGAC GGTAGCCG TTTTGCTGTCTGGGT TERM 2465 1900078 - 1900056 - T 73 -7.7 -4.19238 | gap 1 CCTGTAACCTTAAAA GGCGCTCGCC TGAC AG-GAGCGCC GTGGAAAAGAGCGTC ycaM 1901516 - 1900095 - | transport protein TERM 2466 1900605 - 1900593 - G 70 -3.3 -4.70583 | CGCATCAATAGAAAA CACCA GCG CGGCG ATTTGCCCCAGAGTA TERM 2467 1901035 - 1901015 - G 72 -4 -4.71223 | overlap 1901030 TCACAACATATAAAA TTGACATG ATAAA CATGGCAA TCCCGGCCACAGACC TERM 2468 1901721 - 1901692 - R 78 -5.7 -4.77047 | overlap 1901694 TAAAACATAAACAAA GAGTATGCAAGAC TCAC GTCCTGCATACGA TTCAGAGAACAGTTA TERM 2469 1901719 - 1901694 - R 95 -12.7 -3.95749 | overlap 1901692 AAACATAAACAAAGA GTATGCAAGAC TCAC GTCCTGCATAC GATTCAGAGAACAGT ycaD 1902882 - 1901734 - | MFS family transporter SPA1831 1903202 - 1903095 - | hypothetical protein TERM 2470 1903223 - 1903185 - G 100 -17.5 -3.53811 | opp_overlap 1903177, overlap 1903186 TTGATGGCGGCTAAA GGCGCATTCGGCCTGCA CGTTC TGCAGGCCGAATTCGCG TCAACGCGTTAGCTG TERM 2471 1903222 - 1903186 - G 100 -21 -2.72144 | opp_overlap 1903177, overlap 1903185 TGATGGCGGCTAAAG GCGCATTCGGCCTGCA CGTTC TGCAGGCCGAATTCGC GTCAACGCGTTAGCT TERM 2472 1903829 - 1903817 - R 74 -3.3 -5.0538 | opp_overlap 1903822 GCCGACCGCAAAAAA CACCG AGC CGCTG GCAATTTCATTGCTC dmsB 1904714 - 1904097 - | anaerobic dimethyl sulfoxide reductase chain B dmsA 1907169 - 1904725 - | anaerobic dimethyl sulfoxide reductase chain A TERM 2473 1907379 - 1907366 - R 100 -9.5 -5.61596 | opp_overlap 1907366 ACTGGCATAAAAAAA GCGCC CGAA GGCGC TTTTTAGAAGAGGAG TERM 2474 1907366 - 1907379 + r 93 -9.5 -4.56597 | opp_overlap 1907366 ACTGGCATAAAAAAA GCGCC CGAA GGCGC TTTTTAGAAGAGGAG serS 1908697 - 1907405 - | seryl-tRNA synthetase TERM 2475 1907543 - 1907555 + g 77 -4.8 -4.8543 | ACCATTCAGGGTATG GACC AGACG GGTC TTTTTGTCGGACTTG TERM 2476 1907915 - 1907904 - G 71 -7.2 -4.03167 | opp_overlap 1907903 TCAGAACGGAAACAA GGCG TATG CGCC GTCATTTTAATCGGC TERM 2477 1908787 - 1908771 - R 71 -9.5 -3.18582 | GATTGTATTGATGAA CGTAAAC CGC GTTTACG TAATAGCGACGTTTT ycaJ 1910299 - 1908956 - | recombination factor protein RarA TERM 2478 1909574 - 1909560 - G 74 -7 -4.25104 | overlap 1909561 CCTTTGTTATCAAAA CGCGCG CTG CGCTCG CCGGCGATCTCGGTC lolA 1910911 - 1910309 - | outer-membrane lipoprotein carrier protein TERM 2479 1910768 - 1910788 + g 73 -5.3 -4.66163 | overlap 1910770 TCCCTCCTGCACCGC GGCACCGCT GCC ATCGGTGAC TTTTTGAGTAAAGGT ftsK 1915163 - 1911063 - | DNA translocase FtsK TERM 2480 1913321 - 1913336 + g 91 -6.8 -5.19328 | gap 1, overlap 1913323 1913324 TCTCGTACTGATTGC GCTCCGC CTC GCGG-GC TTTTTCTTCTGCAAT TERM 2481 1913517 - 1913490 - G 95 -12.6 -4.08485 | opp_overlap 1913490 1913506, overlap 1913491 GGTAGCCAAACTAAA GGCAGGCGCAGC GGCC GCGGCGCCTGCT GCCAGGGCGCCACTC TERM 2482 1913516 - 1913491 - G 93 -16.1 -3.04609 | opp_overlap 1913490 1913506, overlap 1913490 GTAGCCAAACTAAAG GCAGGCGCAGC GGCC GCGGCGCCTGC TGCCAGGGCGCCACT TERM 2483 1913983 - 1913997 + g 72 -11.4 -3.09492 | overlap 1913947 1913946 ACAGGTTGCTGCCAC GGCGCA CTT TGCGCC TCTTGCGGTTGAGCA TERM 2484 1915244 - 1915208 - R 95 -11.6 -4.13767 | gap 1, opp_overlap 1915211 1915215, overlap 1915212 1915215 CGCCCGATGCTAAAA CGGACAACAGCACCGGG TTGC CCCGGCACTGTTG-CTG TATGGATTAACAGGA TERM 2485 1915241 - 1915212 - R 95 -16.5 -2.75577 | opp_overlap 1915211 1915215, overlap 1915208 1915215 CGATGCTAAAACGGA CAACAGCACCGGG TTGC CCCGGCACTGTTG CTGTATGGATTAACA TERM 2486 1915238 - 1915215 - R 88 -12.4 -3.52113 | opp_overlap 1915211 1915215, overlap 1915212 1915208 TGCTAAAACGGACAA CAGCACCGGG TTGC CCCGGCACTG TTGCTGTATGGATTA lrp 1915792 - 1915298 - | leucine-responsive transcriptional regulator TERM 2487 1916557 - 1916540 - g 72 -11.3 -3.05384 | CCGCTGCTGATGGAA CGCATGC ATGA GCATGCG GCAAAATTTGAAACT trxB 1916339 - 1917307 + | thioredoxin reductase TERM 2488 1917338 - 1917354 + F 100 -12.3 -4.89063 | opp_overlap 1917338 AACAAAAGTAAAAAA GGCGACT ATA AGTCGCC TTTATTTTTGCGTCG TERM 2489 1917354 - 1917338 - f 100 -12.3 -5.52347 | opp_overlap 1917338 AACAAAAGTAAAAAA GGCGACT ATA AGTCGCC TTTATTTTTGCGTCG TERM 2490 1918007 - 1918031 + G 75 -5.8 -4.65078 | gap 2 ACCGCCGCAATTTCC TGGC-GCTT-GC CCG GCTAAGCGGCCA TTTTCTTGACCGTCT TERM 2491 1918148 - 1918158 + G 74 -2.4 -5.0916 | GCACGATGGAAGTAC TGCG CCT CGCC TTTTTATCTTCCGGC TERM 2492 1918576 - 1918552 - g 70 -9.9 -3.41051 | TTAGCGGCAGGAGAA CGCGCCGTCCT GGT AGGACGCAGCG GTTCCGGTAAAAGCT TERM 2493 1919132 - 1919147 + G 91 -11.8 -4.12599 | opp_overlap 1919132, overlap 1919142 GTTATGCCGAACTCA GCGCCG CCAA CGGCGC TTTTGCGACGTTATT TERM 2494 1919147 - 1919132 - g 71 -11.8 -2.53263 | opp_overlap 1919132 1919142 GTTATGCCGAACTCA GCGCCG CCAA CGGCGC TTTTGCGACGTTATT cydD 1917490 - 1919187 + | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 2495 1920015 - 1920033 + G 86 -9.5 -4.27117 | opp_overlap 1920008, overlap 1920017 CGGCAATACGCAGCC CGGCGCG CTCAT CGCGCTG TTTGTCTTCTGCGCG cydC 1919188 - 1920909 + | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 2496 1921082 - 1921100 + G 80 -8.8 -4.07568 | overlap 1921083 1921085 GTTAATGGCCTACCA GCACGGGA TTT TCCCGTGG TTTTCGCCGGGCGAC TERM 2497 1921083 - 1921099 + G 76 -12.3 -3.04398 | overlap 1921082 1921085 TTAATGGCCTACCAG CACGGGA TTT TCCCGTG GTTTTCGCCGGGCGA TERM 2498 1921456 - 1921467 + G 74 -2.2 -5.05782 | gap 1, opp_overlap 1921456, overlap 1921456 AGAATGCCTCTAAAA CC-GC ACT GCTGG TTTTTTGCGCTGAAT TERM 2499 1921625 - 1921672 + G 100 -5 -5.46657 | gap 1, overlap 1921626 GGCCTCCCGTTTTTG GGTGCCGCGGACATT-ATTTTTG CCC CGAAAGTGAATGTTTTCGGCACA TTTTTTATTGGGGTG TERM 2500 1921626 - 1921671 + G 71 -8.5 -3.86909 | gap 1, overlap 1921625 GCCTCCCGTTTTTGG GTGCCGCGGACATT-ATTTTTG CCC CGAAAGTGAATGTTTTCGGCAC ATTTTTTATTGGGGT aat 1920954 - 1921658 + | leucyl/phenylalanyl-tRNA--protein transferase SPA1844 1921659 - 1922042 + | putative inner membrane protein infA 1921970 - 1922188 + | translation initiation factor IF-1 TERM 2501 1922241 - 1922225 - T 76 -7.9 -4.36914 | opp_overlap 1922225 GGCGGCTGGATAAAA GGTCGGT TTA ACCGGCC TTTTTTGCGTCCATT TERM 2502 1922225 - 1922241 + T 100 -10.1 -5.10497 | opp_overlap 1922225 GGCGGCTGGATAAAA GGTCGGT TTA ACCGGCC TTTTTTGCGTCCATT SPA1846 1923190 - 1922279 - | transcriptional activator TERM 2503 1923491 - 1923464 - g 85 -7 -4.8622 | gap 1, opp_overlap 1923464 1923466, overlap 1923466 CCGGGTAATGAAAAA CGCGGCGTTGG GGAGCAT CCA-CACCGCG GTTTCGAGACCGTGA TERM 2504 1924132 - 1924106 - g 74 -7.3 -4.09455 | opp_overlap 1924110 ATGAACACGAAACAA GAGATCGCAGA AGCAG TCCGCGATTTC AACTCCGGCCGTTTT SPA1847 1923299 - 1924159 + | putative pirin-related protein SPA1848 1924179 - 1924856 + | hypothetical protein TERM 2505 1924863 - 1924886 + F 95 -13.2 -3.69364 | gap 1 CAGCGCTAATTTGCC TCCCCGCGCCA GTT TGG-GCGGGGA TTATGTCTATTGCAT TERM 2506 1925108 - 1925127 + F 100 -10 -4.96646 | ATATTCAAGTTGAGA GCCTGTAC AGAA GTACGGGC TTTTTGCTTATATGC TERM 2507 1925206 - 1925196 - f 76 -4.6 -4.96848 | GGTTCGACACAAAAA CGCC GGG AGCG TTTTTGAACAGAGCT TERM 2508 1925368 - 1925387 + G 100 -10 -5.50499 | opp_overlap 1925368 1925366 CATATTCAAGAAAGA GCTCGTAC GAAA GTACGGGC TTTTTTTGCATCTAA SPA1850 1925210 - 1925422 + | hypothetical protein SPA1851 1925530 - 1925907 + | integrase remnant SPA1852 1926069 - 1926266 + | hypothetical protein TERM 2509 1927287 - 1927273 - T 79 -9.2 -4.1043 | opp_overlap 1927274 TGGAAAGACTACAAA GCCGCC ACC AGCGGC CTGAAGACGGTCTAT TERM 2510 1928672 - 1928655 - T 100 -9.8 -5.24531 | opp_overlap 1928655 AGCCGGCATAAAAAA CCGGGC GCTAAG GCCCGG TTTGTACGGCAGTGA TERM 2511 1928655 - 1928672 + T 80 -9.8 -3.86346 | opp_overlap 1928655 AGCCGGCATAAAAAA CCGGGC GCTAAG GCCCGG TTTGTACGGCAGTGA clpA 1930972 - 1928696 - | ATP-dependent Clp protease ATP-binding subunit TERM 2512 1930032 - 1930048 + g 73 -9.4 -3.7795 | ATCACCCGGATCTTG CCGCTG GAAAG CAGCGG TTTAATCAGATTTGC TERM 2513 1930300 - 1930311 + g 74 -7.2 -4.07568 | GCCAGGCCAGCCCTT CGGC AATC GCCG TTTTACCGACGCCGG TERM 2514 1930370 - 1930393 + g 73 -5.2 -4.56775 | opp_overlap 1930370 1930373, overlap 1930373 ACGGCGACGACACAA GACCTGGATC GCGC GTTCCAGTTC TTTTTCACGACCAAT TERM 2515 1930373 - 1930390 + g 70 -5.5 -4.40561 | opp_overlap 1930370 1930373, overlap 1930370 GCGACGACACAAGAC CTGGATC GCGC GTTCCAG TTCTTTTTCACGACC clpS 1931323 - 1931003 - | ATP-dependent Clp protease adaptor protein ClpS TERM 2516 1931211 - 1931201 - G 75 -6.8 -4.45738 | opp_overlap 1931201 CACGTCAATAACAAA CTCC ATC GGAG TGTAGTCATCATTGA TERM 2517 1931794 - 1931776 - g 70 -8.8 -3.63305 | opp_overlap 1931777, overlap 1931777 TACAGAACGCTTAAA GCCGGACA GTC TGTCCGGT TTGATGTCCACCAGG TERM 2518 1931777 - 1931793 + G 86 -12.3 -3.83026 | opp_overlap 1931776 1931777 ACAGAACGCTTAAAG CCGGACA GTC TGTCCGG TTTGATGTCCACCAG TERM 2519 1931793 - 1931777 - g 72 -12.3 -2.77501 | opp_overlap 1931777, overlap 1931776 ACAGAACGCTTAAAG CCGGACA GTC TGTCCGG TTTGATGTCCACCAG cspD 1931647 - 1931868 + | cold shock-like protein CspD TERM 2520 1931905 - 1931925 + T 100 -12.6 -5.27335 | opp_overlap 1931898 1931905 ATCCAGAAGGCAAAA TGCCAGCC CGATC GGCTGGCA TTTTTATTTAACGCC TERM 2521 1931925 - 1931905 - T 95 -12.6 -4.32482 | opp_overlap 1931905, overlap 1931898 ATCCAGAAGGCAAAA TGCCAGCC CGATC GGCTGGCA TTTTTATTTAACGCC ybjZ 1933944 - 1931998 - | macrolide transporter ATP-binding /permease protein TERM 2522 1932109 - 1932094 - G 80 -4.6 -5.0916 | overlap 1932095 CGTCGAACATAAAAA CGCGCT CGCC AGCGCT GTCAGTGAAAAACCG ybjY 1935059 - 1933941 - | macrolide transporter subunit MacA TERM 2523 1934660 - 1934688 + g 76 -10.3 -3.64822 | TCTTAGCTAACTGCT GCTGGCGCG CCAGCGTAACC CGCGCCAGC TTTAACTCAGCGGCT TERM 2524 1936100 - 1936081 - g 85 -4.2 -5.14965 | gap 1 ATCGCCAGTAAAAAA CGG-GCCGA GTA TCGCCGCCG CTATGCGTTACTCGA ybjX 1935205 - 1936155 + | putative virK protein ybjD 1937810 - 1936152 - | hypothetical protein TERM 2525 1936739 - 1936704 - G 70 -9 -3.73224 | gap 1, opp_overlap 1936711, overlap 1936716 CGACGCGCGATTAAA GCGG-ATATGAAAGGCG ATG CGCCGTCCATCTTCCGC GCTTAACCCGCCCGG TERM 2526 1936726 - 1936716 - G 71 -8.2 -3.85114 | opp_overlap 1936711, overlap 1936704 AAAGCGGATATGAAA GGCG ATG CGCC GTCCATCTTCCGCGC TERM 2527 1937031 - 1937042 + g 71 -7.2 -3.93695 | GATCACCCGATGCGA CCGG CTGC CCGG TTTGTCGATCATCCG TERM 2528 1937334 - 1937322 - G 80 -10.5 -3.87641 | overlap 1937311 AATACGTCGCATAAA GCGCG CAT CGCGC AAACGTAGCACTGGC TERM 2529 1937449 - 1937425 - G 70 -5 -4.42386 | gap 1, overlap 1937426 TCGCTATTGAGAAAA CTGCGCAGCGT CATC ACGCTGC-CAT CGGCGCCGCATTCGC TERM 2530 1937692 - 1937705 + g 70 -6.7 -4.08064 | AACAGAGTCAGCGCA TCCAG CAGG CTGGA TTTTCCCCAGGCGTT TERM 2531 1938172 - 1938192 + G 84 -6.1 -4.99435 | CGTTTTTGGATAACC TCGCCAGTA ATC TGGTGGCGA TTTTTCATTATTCCG TERM 2532 1938599 - 1938616 + G 70 -9.1 -3.62572 | opp_overlap 1938595 1938596 ACCGCTAAAAACCGC CCTGGCG ATGG CGTCAGG TTTCGGCTGGTACTC ybjE 1938012 - 1938911 + | hypothetical protein TERM 2533 1939249 - 1939261 + G 85 -6.9 -4.83615 | overlap 1939250 CGACGTTGATAACTT TGCGC CGC GCGCG TTTTTCTCCACGCTG hcp 1939055 - 1940707 + | hydroxylamine reductase hcr 1940719 - 1941687 + | HCP oxidoreductase, NADH-dependent TERM 2534 1942449 - 1942424 - g 76 -3.2 -5.09173 | overlap 1942425 GAAGAGCTGAAAAAA CTGGCGCAAC TGCTGC GCTACTCCAG CAATATCGCATTGAT poxB 1941845 - 1943563 + | pyruvate dehydrogenase TERM 2535 1944257 - 1944247 - g 71 -8.2 -3.86202 | overlap 1944248 CGCGATTACATTAAA CGCG CGA CGCG CTGGCGTAAAATGGT TERM 2536 1944568 - 1944588 + G 71 -4.6 -4.57569 | gap 1, overlap 1944570 GAACAGCTTGCCGAC GTCGTCGCC CACT GGCG-CGCC TTTTTAGCCCGCTAA ybjU 1943602 - 1944603 + | L-threonine aldolase TERM 2537 1945412 - 1945391 - g 77 -8.1 -4.15565 | gap 1 CCGACTACCGCAAAA GCCTTAATCC AGG GG-TTAAGGC ACGATTTGCTGGCCG TERM 2538 1945527 - 1945514 - g 86 -3.8 -5.40014 | AAAGAAGAAGAAAAA CTGG TGAACT CCAG CGACTGGGGCTACGA ybjT 1944614 - 1946047 + | hypothetical protein SPA1867 1946143 - 1947156 + | putative oxidoreductase ybjR 1947983 - 1947153 - | putative N-acetylmuramoyl-L-alanine amidase TERM 2539 1947396 - 1947381 - G 73 -5.4 -4.55287 | gap 1, overlap 1947382 TCCAGCCAGATAAAA CGCCACA CGC TG-GGCG TCAGGCCAGGCGCCA SPA1869 1948303 - 1947980 - | hypothetical protein ybjP 1948431 - 1948946 + | putative lipoprotein TERM 2540 1948987 - 1949017 + F 71 -7.7 -3.97709 | gap 1, opp_overlap 1948987 TCATAACCCCGTAAA TTGTCTGGCATTCT GCCC GGGATGCC-GACAA TTCTTCTTACCTACT artP 1949175 - 1949903 + | arginine transporter ATP-binding subunit artI 1949921 - 1950652 + | arginine-binding periplasmic protein 1 precursor artQ 1950659 - 1951375 + | arginine transporter permease subunit ArtQ TERM 2541 1951503 - 1951533 + G 74 -8.3 -3.92542 | GCTAAAAACGCCGTT CGTGGTGTGGCTG GTGCG CGGCTATATCACG TTGTTTACCGGTACG artM 1951375 - 1952043 + | arginine transporter permease subunit ArtM TERM 2542 1952136 - 1952162 + F 100 -15.3 -5.68039 | opp_overlap 1952134 1952133 ATATTGAATAAACCC GACGGACAAGT GGTTA ACTTGTCCGTC TTTTTTTATCCATTT artJ 1952280 - 1953011 + | arginine-binding periplasmic protein TERM 2543 1953167 - 1953150 - T 72 -9.1 -3.58343 | opp_overlap 1953139 GTCATCAGTCTCAAA CGCCTGC ATCA ACAGGCG ATTCGGACTAATACT SPA1876 1954716 - 1953229 - | sulfatase TERM 2544 1953257 - 1953277 + g 75 -3.9 -4.93877 | overlap 1953260 AGACCCAGACGGCGA TACTGCTCC GCC GGAGCATCA TTTTCTTTCATCAAA TERM 2545 1953260 - 1953274 + g 70 -10 -3.34291 | overlap 1953257 CCCAGACGGCGATAC TGCTCC GCC GGAGCA TCATTTTCTTTCATC TERM 2546 1954268 - 1954286 + g 77 -4.4 -4.96501 | TCATGACGCCATAGC CCGGAAAC GCC GCCTCCGG TTTGTTTTTGTGGAA SPA1877 1955046 - 1954726 - | putative phosphotransferase enzyme II, B component ulaA 1956419 - 1955076 - | ascorbate-specific PTS system enzyme IIC TERM 2547 1955409 - 1955393 - G 76 -2.9 -5.08824 | overlap 1955395 TGCCCATGGAAAAAA TCGTGCC GAA GGTACAA AAGACGAATCCCAGC SPA1879 1956637 - 1956428 - | hypothetical protein TERM 2548 1956655 - 1956609 - G 84 -13.9 -3.12892 | opp_overlap 1956611 1956614, overlap 1956611 1956614 AAAAATAGGGTAATA TATAACCATGATCGATCGGAG TTTTT CATCGATCGATCATGGTTATT ATTATTTATGGATAA TERM 2549 1956611 - 1956653 + g 100 -18.7 -4.16305 | opp_overlap 1956609 1956611 1956614, overlap 1956614 AAATAGGGTAATATA TAACCATGATCGATCGGAG TTTTT CATCGATCGATCATGGTTA TTATTATTTATGGAT TERM 2550 1956653 - 1956611 - G 100 -16.5 -3.10901 | opp_overlap 1956611 1956614, overlap 1956609 1956614 AAATAGGGTAATATA TAACCATGATCGATCGGAG TTTTT CATCGATCGATCATGGTTA TTATTATTTATGGAT TERM 2551 1956614 - 1956650 + g 100 -16 -4.18443 | opp_overlap 1956614 1956611 1956609, overlap 1956611 TAGGGTAATATATAA CCATGATCGATCGGAG TTTTT CATCGATCGATCATGG TTATTATTATTTATG TERM 2552 1956650 - 1956614 - G 89 -13.8 -3.68738 | opp_overlap 1956611 1956614, overlap 1956611 1956609 TAGGGTAATATATAA CCATGATCGATCGGAG TTTTT CATCGATCGATCATGG TTATTATTATTTATG rumB 1957841 - 1956714 - | 23S rRNA methyluridine methyltransferase ybjO 1958357 - 1957884 - | hypothetical protein TERM 2553 1958163 - 1958145 - G 81 -8.1 -4.23707 | overlap 1958157 1958158 ATAAATTTCAACAAA GACCAGC ACTAA GCTGGCC AGAAAGACCAGGGTT TERM 2554 1958401 - 1958377 - R 71 -7 -4.07568 | overlap 1958380 TGTCTTCCCTGAAAA TGATGCCGCG ACCCG CGCGGCAACG CATTGCCATAGTGGA TERM 2555 1958398 - 1958380 - R 78 -11.7 -3.08032 | overlap 1958377 CTTCCCTGAAAATGA TGCCGCG ACCCG CGCGGCA ACGCATTGCCATAGT potI 1959276 - 1958431 - | putrescine ABC transporter membrane protein TERM 2556 1958983 - 1958968 - G 71 -7.6 -3.96148 | CGCGGTGATCATAAA CGCAAA GCCG TTTGCG CCGCGAAATCGTCCA potH 1960226 - 1959273 - | putrescine ABC transporter membrane protein TERM 2557 1959410 - 1959396 - G 71 -4.2 -4.65895 | overlap 1959397 GCGGTTATTGAAAAA CTCCTG CCA CAGGAC GCGACCAATCATGAT TERM 2558 1959499 - 1959485 - G 74 -4.9 -4.82901 | opp_overlap 1959498, overlap 1959489 CCGCCGGGATAAAAA CCAGC ATCGA GCCGG CGATGATTCCGCCTT potG 1961369 - 1960236 - | putrescine transporter ATP-binding subunit potF 1962569 - 1961457 - | putrescine ABC transporter periplasmic substrate-binding protein TERM 2559 1962299 - 1962281 - G 83 -7.3 -4.57569 | CCAGCGGCTGAAAAA CGCCCGC GGTGA GCTGGCG CTCAAGAAAACTGGC TERM 2560 1962686 - 1962671 - R 77 -9 -3.95007 | overlap 1962664 GATACAAATGAAGAA GAGAGG TCGC CCTCTC TGCCATCAAGCTCGC TERM 2561 1962910 - 1962870 - R 88 -3.4 -5.67967 | gap 2, opp_overlap 1962886 1962889, overlap 1962876 1962878 AGCAGCATAAAAAAA CG-TAAACAG-CAGCCGC GCTGGCA GCGACTGCCTGATTATCG GGAGGGATCAGTGAA ybjN 1963394 - 1962918 - | hypothetical protein rimK 1964393 - 1963491 - | ribosomal protein S6 modification protein TERM 2562 1964441 - 1964421 - R 73 -7.5 -4.19276 | TGAAAACCCTGAAAA GCCCGCGTA TCA TACACTGGC CCGCAGGTTTTAGCG nfsA 1965173 - 1964451 - | nitroreductase A ybjC 1965453 - 1965157 - | hypothetical protein TERM 2563 1965349 - 1965310 - G 73 -10.7 -3.38604 | gap 1, overlap 1965306 1965303 CAGGAAAACCATCAA TACGCCAGCCAGCGACGT ATTGA ACGGCGCGGGC-AGCGTA AGGTAATGATTAAGC grxA 1965623 - 1965886 + | glutaredoxin 1 TERM 2564 1965890 - 1965926 + T 90 -7.1 -5.41143 | overlap 1965892 CTTTTCGCCTGATTG CTCTGGCAACGCCCTCT ACC GGAGGGCGCTATCGGCG TTTTTTTCGCCGGTG ybjM 1966295 - 1965918 - | hypothetical protein TERM 2565 1966153 - 1966138 - G 78 -2.5 -5.18726 | CGGTGAGAACAAAAA CTGGC CACCGC ACCAG GCAACGTAAAAAATA TERM 2566 1967503 - 1967485 - g 74 -7.5 -4.20516 | overlap 1967498 1967501 TCGTGACGGAAGAAA TTGTGGT GAAAA ACCACAA TGCGGTCGGTCGCCG TERM 2567 1967508 - 1967498 - g 71 -4.6 -4.57341 | overlap 1967485 1967501 1967504 1967505 AATTGTGGTGAAAAA CCAC AAT GCGG TCGGTCGCCGCCTCG TERM 2568 1967680 - 1967662 - g 71 -4.5 -4.61231 | opp_overlap 1967662 1967657 CCAGACGCGTAAAAA CCATTGC CGATC GCATTGG TTTTATTTCGATTCA TERM 2569 1967662 - 1967680 + G 77 -4.5 -4.94058 | opp_overlap 1967662, overlap 1967657 CCAGACGCGTAAAAA CCATTGC CGATC GCATTGG TTTTATTTCGATTCA SPA1892 1966566 - 1968251 + | hypothetical protein SPA1893 1968988 - 1968368 - | TetR family transcriptional regulator TERM 2570 1968918 - 1968933 + g 71 -4.7 -4.63089 | TAGGTCTTTACCGCT TCCAG TGTGGC CTGGA TTATTTTTTCCCGTC TERM 2571 1969070 - 1969051 - H 100 -10.8 -5.03314 | TTTACGCTGAAAAAA CAGACAGT AAAA ACTGTCTG CACAATGAAGTATGA SPA1894 1969210 - 1970367 + | hypothetical protein TERM 2572 1970708 - 1970693 - g 86 -6.8 -5.00616 | CGCCTGTGGAAAAAA CAGCGC CTAC ACGCTG AAACGCTACGACGAT TERM 2573 1970743 - 1970733 - g 77 -8.2 -4.10161 | opp_overlap 1970732 1970735 GACGATGCGTTAAAA GCCG TTG CGGC AATGTATTATCATCG SPA1895 1970364 - 1971179 + | hypothetical protein mdfA 1972465 - 1971233 - | multidrug translocase MdfA TERM 2574 1971795 - 1971812 + g 81 -4 -5.24129 | overlap 1971799 CCCAGCGCTAACGCC CCTGCG ACGAAC CGCCGG TTTTTTATCACCAGC TERM 2575 1972443 - 1972417 - G 74 -2.9 -4.86133 | gap 1, opp_overlap 1972433 GACAGAGAGGAAAAA GCAGC-GCCTGA CGTC CCAGCCTGCCGC CTGATTGTAAACGAT ybjG 1972778 - 1973386 + | undecaprenyl pyrophosphate phosphatase TERM 2576 1973445 - 1973400 - f 88 -5.5 -5.54264 | gap 1, opp_overlap 1973409 1973412, overlap 1973409 1973412 AAATAGCGAAAAAAA GAGTAATATTAAGCGCTCTGTA TGG TGCGGAGCGCTT-ATTTAACTC TCCAGGGGAACTATG TERM 2577 1973409 - 1973437 + F 100 -14.7 -3.70902 | opp_overlap 1973400 1973409 1973412, overlap 1973412 AAAAAAGAGTAATAT TAAGCGCTCTGTA TGG TGCGGAGCGCTTA TTTAACTCTCCAGGG TERM 2578 1973437 - 1973409 - f 71 -10.3 -2.62118 | opp_overlap 1973409 1973412, overlap 1973400 1973412 AAAAAAGAGTAATAT TAAGCGCTCTGTA TGG TGCGGAGCGCTTA TTTAACTCTCCAGGG TERM 2579 1973412 - 1973434 + F 95 -12 -3.98913 | opp_overlap 1973412 1973409 1973400, overlap 1973409 AAAGAGTAATATTAA GCGCTCTGTA TGG TGCGGAGCGC TTATTTAACTCTCCA deoR 1973458 - 1974216 + | DNA-binding transcriptional repressor DeoR TERM 2580 1974256 - 1974217 - T 81 -12.8 -3.18383 | gap 1, opp_overlap 1974220 1974220, overlap 1974218 ACTCTGATGTATTAA CCGCCCGTAGCCGGATGCG ACG CGCACCCGGCAACGGA-GT TATTTTACGAGAACC TERM 2581 1974255 - 1974218 - T 90 -16.3 -2.50816 | gap 1, opp_overlap 1974220 1974220, overlap 1974217 CTCTGATGTATTAAC CGCCCGTAGCCGGATGCG ACG CGCACCCGGCAACGGA-G TTATTTTACGAGAAC TERM 2582 1974220 - 1974255 + T 100 -15.4 -4.17048 | gap 1, opp_overlap 1974218 1974217, overlap 1974220 CTGATGTATTAACCG C-CCGTAGCCGGATGCG ACG CGCACCCGGCAACGGAG TTATTTTACGAGAAC TERM 2583 1974220 - 1974254 + T 93 -15.6 -3.09908 | opp_overlap 1974218 1974217, overlap 1974220 CTGATGTATTAACCG CCCGTAGCCGGATGCG ACG CGCACCCGGCAACGGA GTTATTTTACGAGAA dacC 1975463 - 1974261 - | D-alanyl-D-alanine carboxypeptidase fraction C TERM 2584 1974673 - 1974655 - G 77 -7.4 -4.2828 | TCTGACTCATTAAAA CGAATACG GTC CGTTTTCG CCCCCAGCACGACAG yliJ 1975707 - 1976333 + | glutathione s-transferase family protein yliI 1977463 - 1976330 - | putative oxidoreductase TERM 2585 1976941 - 1976960 + g 86 -10.6 -4.17048 | opp_overlap 1976940 1976941 GTAATTTATCCAAAT CCTGCGCG GTAG CGCGCTGG TTATTTTCACCCAGG TERM 2586 1977576 - 1977559 - R 100 -12.7 -4.56597 | opp_overlap 1977559 GCGGTCCGGTAAAAA GGGGGAG TCGC CTCCCCC TTATTCAGACCTGTG TERM 2587 1977559 - 1977576 + r 88 -12.7 -3.63073 | opp_overlap 1977559 GCGGTCCGGTAAAAA GGGGGAG TCGC CTCCCCC TTATTCAGACCTGTG bssR 1977964 - 1977581 - | biofilm formation regulatory protein BssR TERM 2588 1977740 - 1977715 - G 70 -5.3 -4.49556 | gap 1 CGCTCATTAAACAAA CGGCGGCG-GCT GCA AGCGCGCCTTCG GCACGGCGCAGCGCG yliG 1978195 - 1979520 + | hypothetical protein yliD 1980522 - 1979611 - | ABC transporter permease yliC 1981445 - 1980525 - | ABC transporter permease TERM 2589 1981041 - 1981028 - G 87 -8.1 -4.66535 | overlap 1981016 1981030 AAGCCGGAAAAGAAA TGCCG GTCA CGGCA AGCGTCATTCCTAAC yliB 1983044 - 1981506 - | putative ABC transporter periplasmic binding protein TERM 2590 1981564 - 1981537 - G 70 -9.1 -3.71649 | TCGTCAAAGCTGAAA CCGGTATCCGG CATAAT CCAGAAACCGG TCAAATTTTTACTGT TERM 2591 1982813 - 1982826 + g 78 -2.3 -5.17576 | CAGAAACGGTATAGC CTTCC GCCA GGACG TTTTTTACCTTCATG yliA 1984948 - 1983077 - | glutathione transporter ATP-binding protein TERM 2592 1983310 - 1983298 - G 71 -4.7 -4.59773 | overlap 1983299 GCGGATTTTCAAAAA CGGCG CGC CGCGG CCCCATCTCAACAAT TERM 2593 1984921 - 1984886 - G 74 -10.4 -3.53012 | opp_overlap 1984875 CCCTTCGTGGTGAAA CGCGATATTCAGGCCA CTGA CGGACAGAACATCGCG GCTATCCAGTTCATC ybiK 1985843 - 1984959 - | L-asparaginase moeA 1986104 - 1987339 + | molybdopterin biosynthesis protein MoeA TERM 2594 1987633 - 1987596 - g 95 -14.9 -3.64703 | gap 1 GGTCGGGCAGCCAAA GGTTGAGTC-CGCCCGCG ACG CGCTGGCGCGAATCAACC CGCATATTACCATTA moeB 1987363 - 1988088 + | molybdopterin biosynthesis protein MoeB ybiY 1988366 - 1989265 + | putative pyruvate formate-lyase 3 activating enzyme TERM 2595 1990613 - 1990601 - g 76 -10.5 -3.64703 | TCGGCTGTATCGAAA CCGCC GTC GGCGG GAAATGGGGTTATCG TERM 2596 1991019 - 1991005 - g 80 -4.2 -5.00616 | GCCGCCGTGAAAAAA CTGGTC TTC GAACAG GGCGTTATCGGTCAA ybiW 1989271 - 1991703 + | putative formate acetyltransferase 3 TERM 2597 1991759 - 1991776 + T 77 -11.3 -3.14211 | opp_overlap 1991761 TGGCGCTACGCTTAA CAGGCCT ACGC AGGCCTG TTAATCAGAAGGGAT ybiV(1) 1992590 - 1991781 - | HAD family hydrolase ybiU 1992852 - 1994117 + | hypothetical protein ybiT 1995810 - 1994239 - | ABC transporter ATP-binding protein TERM 2598 1994669 - 1994692 + g 74 -7.4 -4.10453 | overlap 1994670 TCATATTCGTGGTCC TGCGCGTAGT AACC AATACGCGCG TTTTCCGACCATTTA TERM 2599 1996502 - 1996492 - g 85 -4.6 -5.15969 | overlap 1996493 GTTGAACGTAAAAAA GCCG GTC CGAC CTGGACGCCTACGGC TERM 2600 1996794 - 1996771 - g 74 -7.4 -4.15106 | gap 1 GATGAACCGGTAAAA GCCACCA-CCG AGC CGGACGGTAGC CGTTACATTGAGGTG ybiS 1996054 - 1996974 + | hypothetical protein TERM 2601 1996989 - 1997015 + T 100 -19.6 -3.03243 | opp_overlap 1996979 1996975, overlap 1996992 ACAGACTCTGCCTGC GAAGCCCGATAG ACA CTATCGGGCTTC TCTTACGGCATCAGT TERM 2602 1996992 - 1997012 + T 100 -15.5 -3.66288 | opp_overlap 1996979 1996975, overlap 1996989 GACTCTGCCTGCGAA GCCCGATAG ACA CTATCGGGC TTCTCTTACGGCATC ybiR 1998130 - 1997018 - | hypothetical protein SPA1918 1998600 - 1998127 - | manganese transport regulator MntR TERM 2603 1998912 - 1998939 + H 83 -9.2 -4.21194 | opp_overlap 1998912 1998915 1998916, overlap 1998916 AACCCTTCCACGAAA TAAGGCGGCG GTGCGGTA CGCCGCTTTA TTTTGCATCCTCAAC TERM 2604 1998916 - 1998935 + H 82 -7.8 -4.6951 | opp_overlap 1998916 1998915 1998912, overlap 1998912 CTTCCACGAAATAAG GCGGCG GTGCGGTA CGCCGC TTTATTTTGCATCCT TERM 2605 1998951 - 1998977 + H 100 -8 -5.77632 | overlap 1998954 1998955 TTTATTTTGCATCCT CAACGGAAATGG CGC CCATTTCCCCTG TTTTTTTGTGGTTTT TERM 2606 1998955 - 1998973 + H 76 -11.8 -2.54537 | overlap 1998954 1998951 TTTTGCATCCTCAAC GGAAATGG CGC CCATTTCC CCTGTTTTTTTGTGG TERM 2607 1999203 - 1999247 + G 75 -6.1 -4.62783 | overlap 1999204 1999206 1999208 ACCCTTATCGATTCA CTTCTGGCCCGTCGTCGGGCT GTA AGCCCGTGGGCGGGCCTCTAC TTTTTACAGTCGCTG TERM 2608 1999204 - 1999246 + G 70 -9.6 -3.37188 | overlap 1999203 1999206 1999208 CCCTTATCGATTCAC TTCTGGCCCGTCGTCGGGCT GTA AGCCCGTGGGCGGGCCTCTA CTTTTTACAGTCGCT TERM 2609 1999206 - 1999244 + G 78 -12.2 -3.25166 | overlap 1999204 1999203 1999208 CTTATCGATTCACTT CTGGCCCGTCGTCGGGCT GTA AGCCCGTGGGCGGGCCTC TACTTTTTACAGTCG TERM 2610 1999208 - 1999242 + G 100 -19.2 -3.18433 | overlap 1999206 1999204 1999203 TATCGATTCACTTCT GGCCCGTCGTCGGGCT GTA AGCCCGTGGGCGGGCC TCTACTTTTTACAGT TERM 2611 1999693 - 1999704 + G 86 -7.2 -4.74103 | TTAAGGTTATTGATA CCGG CTAT CCGG TTTTTCGCTTCGCCA ybiP 1999179 - 2000759 + | hypothetical protein TERM 2612 2000799 - 2000782 - T 100 -9.1 -5.81412 | opp_overlap 2000776 2000782 TTCAGGCAAAAAAAA TCCGCCC CGAA AGGCGGA TTTTTCATTTTCACC TERM 2613 2000782 - 2000799 + T 91 -8.4 -5.0925 | opp_overlap 2000782, overlap 2000776 TTCAGGCAAAAAAAA TCCGCC CCGAAA GGCGGA TTTTTCATTTTCACC ompX 2001337 - 2000822 - | outer membrane protein X TERM 2614 2002032 - 2002051 + H 72 -2.8 -4.9138 | gap 1, overlap 2002037 GCGGTCGCGCTGTTT TCATCCCGG CGT CCGGTA-GA TTTTATTTGGGTCGT dps 2002880 - 2003383 + | DNA starvation/stationary phase protection protein Dps TERM 2615 2003520 - 2003538 + F 76 -7.4 -4.19953 | opp_overlap 2003512 TAAGTCATCCCTATA CCCCTG CCTGGCA CAGGGG TTTTGCACTTAAATA TERM 2616 2004177 - 2004157 - g 79 -3.2 -5.17576 | opp_overlap 2004157 GACGAACGTAAAAAA GCGATCGA CTTTT CCGATGGC TATTACAAAAGCGGT glnH 2003860 - 2004606 + | glutamine ABC transporter periplasmic protein glnP 2004752 - 2005411 + | glutamine ABC transporter permease protein TERM 2617 2006006 - 2005994 - g 70 -9.1 -3.76224 | TTGTCACTCACGAAA TCGGC TTT GCCGA AAAAGTCGCCTCACG glnQ 2005408 - 2006130 + | glutamine ABC transporter ATP-binding protein TERM 2618 2006166 - 2006135 - f 100 -16.6 -2.87211 | ACGTCTCCTGAGATA TCGCCCTTCCTGCC CTGC GGCAGGAAGGGCAT CATGGAATAGTCCCA TERM 2619 2006253 - 2006270 + G 84 -2.7 -5.39721 | gap 1, overlap 2006253 CTGGAGGAGTCATGC GG-TGGAC CCT GTTCATCC TTTTTTGTCTACTGG TERM 2620 2006394 - 2006381 - g 100 -3.7 -6.09888 | overlap 2006382 2006383 CCTGAACAAAAAAAA GCGGC CTAT GCGGC CCTGGCTGACGTACT TERM 2621 2006789 - 2006812 + G 84 -8.8 -4.31433 | gap 1, overlap 2006788 2006791 AGCAACTGGTTACAG CTC-CCGGCGA TGA TCGCCGGCGCG TTTATTATCGACCTG TERM 2622 2007209 - 2007197 - g 74 -3.3 -4.86385 | ATCTTTAAAAACAAA GCGGA GAT TACGC AACATTTATTAAGTC TERM 2623 2008231 - 2008256 + G 95 -14.1 -3.47349 | overlap 2008226 TATTCGCGGGCTGAT TATCGGCGAAC CCAC GTTCGCCGGTA TTGTCGGTTTAACGA ybiO 2006249 - 2008471 + | hypothetical protein ybiN 2009394 - 2008468 - | putative SAM-dependent methyltransferase TERM 2624 2008716 - 2008702 - G 80 -9.2 -4.1552 | CATTTTTTTAATAAA GGCGAC TTC GCCGCC TTCGCACCATAGCTC TERM 2625 2009528 - 2009540 + H 80 -5.5 -5.0538 | opp_overlap 2009528 2009526 CATGGTCTGAAAAGA TCGCG CGA TGCGA TTTTTTCACCTGACG ybiI 2009599 - 2009865 + | hypothetical protein SPA1929 2010023 - 2010163 + | hypothetical protein TERM 2626 2010294 - 2010259 - g 73 -6 -4.41844 | gap 1, overlap 2010260 AAAACCTGCATAAAA TCGGCGTAGTGTCTGCC GAT GGC-GCCACCACGCTGG ATGGCCTGGAAGCTA ybiJ 2010150 - 2010410 + | hypothetical protein TERM 2627 2010539 - 2010560 + T 100 -13.7 -5.8187 | overlap 2010558 TTGTTACCCTTATTT GCCCGTCCG TCAC TGGACGGGC TTTTTTTATTCGCTA ybiB 2011540 - 2010566 - | hypothetical protein TERM 2628 2011587 - 2011574 - R 71 -9.5 -3.24747 | opp_overlap 2011570 2011568 TGCTCACAGCATTAA CGCCG TCGG CGGCG TGCAGGTTTTGCTTT dinG 2013714 - 2011570 - | ATP-dependent DNA helicase DinG TERM 2629 2012101 - 2012115 + g 79 -2.8 -5.21709 | GCTGGCAAACAGTAC CAGCAT ACC ATGATG TTTTTTGCTCTCCAG TERM 2630 2012263 - 2012274 + g 85 -2.2 -5.45802 | gap 1, opp_overlap 2012253 2012263, overlap 2012250 ATCCAGCGCCACAAA G-CGG TCG CCGGC TTTTTCTTTTAAGCC TERM 2631 2013468 - 2013482 + g 78 -2.1 -5.27779 | ACGCCACGTTAGCAG TACTG ACCAC CAGTG TTTTTTGCTCTTCCC rhlE 2015282 - 2013921 - | ATP-dependent RNA helicase RhlE TERM 2632 2013986 - 2014001 + g 75 -6 -4.564 | CGCCAGCGGGTTTCC CCTCGC CTGT GCGCGG TTTTGGTTTCGCCTT ybiH 2015512 - 2016186 + | putative DNA-binding transcriptional regulator TERM 2633 2017065 - 2017051 - g 70 -7 -4.1196 | opp_overlap 2017054, overlap 2017042 2017060 AATTTACGCCGAAAA CCGTCG AAA CGCCGG ATCTGCGTACCGATC SPA1935 2016186 - 2017181 + | hypothetical protein TERM 2634 2017516 - 2017535 + G 71 -6.4 -4.23104 | opp_overlap 2017516 GTTACCGGCGAGATA CGGGAAAA GACC TTTGCCCG TTTGTTGGAGTTTAC TERM 2635 2017997 - 2017987 - g 74 -2.4 -5.03314 | CTGATCCTGAAAAAA GAGG CGA CCGC AGCAGATATTCGTCA TERM 2636 2018432 - 2018444 + G 79 -3.3 -5.24531 | overlap 2018427 2018433 GCAACCTGACGGTTG AGCAG AAC CTGCG TTTTTTCTCCGGCGT ybhF 2017174 - 2018910 + | ABC transporter ATP-binding protein ybhS 2018903 - 2020033 + | putative inner membrane protein TERM 2637 2020083 - 2020108 + F 74 -8.3 -3.9941 | gap 1, overlap 2020062 2020061 2020082 TAAGGCGCTTGCGCC GC-CATCCGGCA TTA TGCCTGATGCGC TTTGCTTATCAGGCC ybhR 2020149 - 2021255 + | putative inner membrane protein ybhQ 2021627 - 2021217 - | hypothetical protein TERM 2638 2021317 - 2021285 - G 85 -15.5 -2.65264 | overlap 2021305 CCAGTAGCGAGACCA CGGCGGGCCCGGCCA GGA TAGCCAGCCCCGCCA GCGCCAGCAAGACAT TERM 2639 2022333 - 2022305 - g 74 -7.4 -4.08216 | gap 2, overlap 2022293 2022306 TGACTGGCGGCAAAA GGCCGGCCCGCCGT TAA ACG-C-GGCCGGGC TGGAGGAGATATTCA ybhP 2021760 - 2022518 + | hypothetical protein TERM 2640 2022696 - 2022665 - g 77 -3.6 -5.0133 | overlap 2022667 2022686 GAGGTGGGTAAAAAA CTCCATGCCGCTCT GCTA AAAGCCGCACAGCG CGGCGTAAAAGCCGA TERM 2641 2022700 - 2022686 - g 80 -9.2 -4.07568 | overlap 2022667 2022665 GCCGCTCTGCTAAAA GCCGCA CAG CGCGGC GTAAAAGCCGAAGTA TERM 2642 2023086 - 2023072 - g 83 -7.8 -4.64676 | opp_overlap 2023076 2023078 TCAGGCTGAAGAAAA TCGCCA CCC CGGCGA AGCGCAGGCGCTGTT ybhO 2022515 - 2023756 + | cardiolipin synthase 2 ybhN 2023756 - 2024718 + | hypothetical protein TERM 2643 2024730 - 2024756 + T 72 -5.9 -4.4009 | gap 1, opp_overlap 2024730 ATAAATTTAAGCAGA CGCGTTTTCGCT TTCC AGC-ACAACGCG TTTTATCCGGTAAAA SPA1943 2024963 - 2024721 - | hypothetical protein TERM 2644 2024805 - 2024794 - G 78 -2.2 -5.252 | TATGCTGAGAAAAAA GACG TATT CATC TGTAAGCGGGAAAAA TERM 2645 2025056 - 2025026 - R 72 -6.3 -4.2558 | CATTTCTTATTAAAA TC-CTCACCGCCATT TTT AATGGCG-CGAGTGA CGTCTTTAGCTTCAC ybhM 2025860 - 2025153 - | hypothetical protein TERM 2646 2025969 - 2025987 + r 87 -10.3 -4.09864 | opp_overlap 2025969 TAGTCCTAAAAAAAA TCCTGGC GCAGG GCCAGGA TTTTAAGAGATCAAT TERM 2647 2025987 - 2025969 - R 100 -10.3 -5.76949 | opp_overlap 2025969 TAGTCCTAAAAAAAA TCCTGGC GCAGG GCCAGGA TTTTAAGAGATCAAT ybhL 2026711 - 2026007 - | putative permease TERM 2648 2026111 - 2026139 + g 72 -2.5 -4.84529 | gap 1 TACGCAGATTAGCGC TATC-GCGGGTA TCTATT TGCTCGCCGATA TTTTTCAGTTTCTGC MoaE 2027211 - 2026759 - | molybdopterin synthase large subunit moaD 2027458 - 2027213 - | molybdopterin synthase small subunit moaC 2027936 - 2027451 - | molybdenum cofactor biosynthesis protein C TERM 2649 2027903 - 2027913 + g 77 -8.2 -4.09509 | CCACCATGTGCGCTT CGCC TGC GGCG TTTATATGGGTTAAT moaB 2028451 - 2027939 - | molybdenum cofactor biosynthesis protein B moaA 2029462 - 2028473 - | molybdenum cofactor biosynthesis protein A TERM 2650 2028791 - 2028757 - G 79 -2.7 -5.24129 | gap 2 CGGGGTGACAAAAAA CCTGCGCCGGACCATCG CTA CGCTGG--CGGAGCTGG TGGATCCAACCGCGC TERM 2651 2029819 - 2029833 + H 70 -10 -3.049 | GAAAACCCGCGACTT GCGCTA CTG TAGCGC TGCTTATTTGACTTC ybhK 2029859 - 2030767 + | hypothetical protein TERM 2652 2030828 - 2030801 - T 90 -13.6 -3.40403 | gap 1, opp_overlap 2030790 2030794 2030801 CTGCGCTTATCAGAA GCCTGTTTACACC GAA GG-GTAAACAGGC TCTCTCCCTCTTCTG TERM 2653 2030801 - 2030828 + T 85 -13.6 -2.95894 | gap 1, opp_overlap 2030801, overlap 2030790 2030794 CTGCGCTTATCAGAA GCCTGTTTACACC GAA GG-GTAAACAGGC TCTCTCCCTCTTCTG TERM 2654 2031145 - 2031169 + T 74 -3.8 -5.05301 | gap 1 CACAGCGCAAACCAT TTG-TGAAAAT CCCT ATTTTCAGCAA TTTTTATCCTTATTT TERM 2655 2032572 - 2032591 + T 75 -6.4 -4.40561 | overlap 2032575 TAAGTCCTAATATTT TCAGACGG AGTT CCGTCTTA TTATTTTTCAGGCAG TERM 2656 2032575 - 2032588 + T 79 -8.1 -4.31587 | overlap 2032572 GTCCTAATATTTTCA GACGG AGTT CCGTC TTATTATTTTTCAGG SPA1953 2033308 - 2033135 - | hypothetical protein TERM 2657 2033407 - 2033444 + r 100 -16.6 -3.2653 | opp_overlap 2033412, overlap 2033412 AGCCAAGGAGAGAGG GAAAATTAGCGTTGGG TTCAGC CTCAACGCTAATTTTC TTCAGTTGTGATTAA TERM 2658 2033412 - 2033439 + r 100 -10.7 -4.73635 | opp_overlap 2033412, overlap 2033407 AGGAGAGAGGGAAAA TTAGCGTTGGG TTCAGC CTCAACGCTAA TTTTCTTCAGTTGTG TERM 2659 2033439 - 2033412 - R 83 -9.3 -4.26589 | gap 1, opp_overlap 2033412 2033407 AGGAGAGAGGGAAAA TTAGCGTTG-GG TTCAG CCTCAACGCTAA TTTTCTTCAGTTGTG uvrB 2035637 - 2033616 - | excinuclease ABC subunit B TERM 2660 2034785 - 2034801 + g 77 -8 -4.08557 | TGCGCTGGCTTAATC GCTGCT CTTCA AGCAGC TTATTATTTGCCAGC TERM 2661 2034878 - 2034898 + g 70 -6.7 -4.14739 | CCTGCAGAATACGCT CGCGCGGCG TCA CGTAGTGCG TTTTGGGATAGATAG TERM 2662 2035810 - 2035824 + r 71 -10 -3.28712 | opp_overlap 2035809 2035808 TCGCGGGGTAAAATT CCAGCA GTG TGCTGG TTATCCCCAGACCAG TERM 2663 2036264 - 2036245 - R 79 -12.2 -2.84325 | overlap 2036242 GCTGGCGAAAGAGCA GCAGGATC GTCT GATCCTGC AAGAAGGCGGTTTTT bioD 2036974 - 2036288 - | dithiobiotin synthetase bioC 2037722 - 2036967 - | biotin biosynthesis protein BioC TERM 2664 2037254 - 2037231 - G 73 -5.2 -4.56597 | opp_overlap 2037236, overlap 2037233 CTCTTCCGGCAAAAA GCTATTCGCG TGAG CGCGATTATC GACGGCCTGCCATGC TERM 2665 2037621 - 2037636 + g 71 -10.4 -3.19602 | opp_overlap 2037614, overlap 2037618 TGTCAACAGCGTCAG CAGCGC ATCC GCGCTG TGTTGCTGTAAAGAG bioF 2038863 - 2037706 - | 8-amino-7-oxononanoate synthase TERM 2666 2038825 - 2038795 - G 71 -11.1 -2.97747 | gap 1, opp_overlap 2038812, overlap 2038811 CTGCGACACCACATA GCGGCGGCGCAACG TATC CGTCGC-CCGACGC GCCGTCAGCGCATCG bioB 2039900 - 2038860 - | biotin synthetase bioA 2039987 - 2041276 + | adenosylmethionine--8-amino-7-oxononanoate transaminase ybhB 2041334 - 2041810 + | putative kinase inhibitor protein hutH 2043415 - 2041895 - | histidine ammonia-lyase TERM 2667 2042805 - 2042793 - G 75 -6.9 -4.41348 | overlap 2042794 TGTGCCTCAAACAAA CCGCG CAG CGCGA AGGCCGTCGACGCCT TERM 2668 2042989 - 2042947 - G 79 -13.5 -2.70932 | overlap 2042961 TTCCTTCGCCAAGTA GCGTCAG-CGACAGATGCGCC AGA GGCGC-TAAGTCGCCTGACGC GCCAACCGACCCTTT TERM 2669 2044111 - 2044126 + r 70 -9 -3.40878 | overlap 2044110 TCCACCCCCATCTCT TTCGCC ATCT GGCGAA TATTGTTGCCATAGT TERM 2670 2044372 - 2044403 + r 75 -10.1 -3.60098 | gap 1, opp_overlap 2044369 TCCGGCAGGATATCC GCCGCGTTCG-CGC ACAGG GCGACGGACACGGC TTTCCCCTCGCGGGT hutC 2046024 - 2045299 - | histidine utilization repressor TERM 2671 2045379 - 2045367 - G 76 -9.1 -4.06419 | GGGCGTGAGAAACAA TCCGC GAC GCGGA CCAGGTCGTACGACG hutG 2047010 - 2046069 - | formimidoylglutamase TERM 2672 2046486 - 2046456 - G 85 -11 -4.0127 | overlap 2046451 2046457 ACAGGCATAATGAAA CGCGCGGCTCTGCG CGT CGCATAGCTGCGCC AGTTGACGAAACGGC TERM 2673 2046485 - 2046457 - G 86 -14.5 -3.00039 | overlap 2046451 2046456 CAGGCATAATGAAAC GCGCGGCTCTGCG CGT CGCATAGCTGCGC CAGTTGACGAAACGG hutI 2048230 - 2047007 - | imidazolonepropionase ybhC 2048468 - 2049751 + | putative pectinesterase TERM 2674 2049775 - 2049809 + T 95 -13.5 -4.25104 | opp_overlap 2049778, overlap 2049776 2049778 CCGGTTCAGGCTTAT AAACGGGCCGCCGCA GCAGA TGTGGCGGCCCGTGG TTTTACTGCAAGCGA TERM 2675 2049776 - 2049808 + T 100 -17 -3.14848 | opp_overlap 2049778, overlap 2049775 2049778 CGGTTCAGGCTTATA AACGGGCCGCCGCA GCAGA TGTGGCGGCCCGTG GTTTTACTGCAAGCG TERM 2676 2049806 - 2049778 - T 100 -17.4 -3.87815 | opp_overlap 2049776 2049775 2049778 GTTCAGGCTTATAAA CGGGCCGCCGCA GCAGA TGTGGCGGCCCG TGGTTTTACTGCAAG TERM 2677 2049778 - 2049806 + T 100 -19.6 -3.13504 | opp_overlap 2049778, overlap 2049776 2049775 GTTCAGGCTTATAAA CGGGCCGCCGCA GCAGA TGTGGCGGCCCG TGGTTTTACTGCAAG ybhE 2050890 - 2049895 - | 6-phosphogluconolactonase TERM 2678 2049930 - 2049948 + g 71 -4.5 -4.65895 | opp_overlap 2049919 CCCACATTGGCCCCT GGCCG ACGGCATAA CGGCC TTTTTCCGTCAGCAA TERM 2679 2050624 - 2050610 - G 83 -6.4 -4.84918 | CCGACAAAGACAAAA CGACCA TGA TGATCG GTAGAAATATGGGTC ybhA 2051054 - 2051872 + | phosphotransferase modC 2052931 - 2051873 - | molybdate transporter ATP-binding protein TERM 2680 2052515 - 2052529 + g 72 -2 -4.91109 | overlap 2052517 GAGCAATGCCCGGCC TATCGC TAC GCGCTG TTTTTCTCCTCCGGA modB 2053623 - 2052934 - | molybdate ABC transporter permease protein TERM 2681 2053236 - 2053218 - G 95 -8 -4.89852 | opp_overlap 2053220 2053231, overlap 2053219 TGATAGTCAGAAAAA CGCGCCAG CGC CCGGCGCC CAGCGTTCTGGCGGC TERM 2682 2053235 - 2053219 - G 77 -11.5 -3.53188 | opp_overlap 2053220 2053231, overlap 2053218 GATAGTCAGAAAAAC GCGCCAG CGC CCGGCGC CCAGCGTTCTGGCGG modA 2054396 - 2053623 - | molybdate transporter periplasmic protein TERM 2683 2054101 - 2054114 + g 85 -4.5 -5.26316 | overlap 2054100 2054100 AATGTTTCGCGCGTC GTGGT ATCC ACCGC TTTTTTATCGGCTGC TERM 2684 2054535 - 2054552 + r 75 -9.8 -3.54424 | opp_overlap 2054535 CTTGAGTAACAAAAA CGCCCG ACTGAG CGGGCG TTTGGGGAAATCAGC TERM 2685 2054552 - 2054535 - R 100 -9.8 -5.1356 | opp_overlap 2054535 CTTGAGTAACAAAAA CGCCCG ACTGAG CGGGCG TTTGGGGAAATCAGC ybhT 2054712 - 2054563 - | hypothetical protein TERM 2686 2054778 - 2054803 + H 73 -7.6 -4.18494 | gap 1 AAGCACTCCCCTTTT GTGCGGTCGGC TTTGC GCTGAC-GCAC TTTTCAGTCACAATA TERM 2687 2055323 - 2055307 - g 74 -7.9 -4.13767 | overlap 2055319 TGGCCGACGGCAAAA CGCGGCT CAA AGTCGCG CTGACGGCGCAAAGC modE 2054841 - 2055629 + | DNA-binding transcriptional regulator ModE TERM 2688 2055824 - 2055858 + G 77 -11.4 -3.61398 | gap 1 ACGGGAGCGGGAAGT CGGC-GCTCGCCCGC GCGCTG GCGGGTGAACTGCCG TTATTAACAGGCGAG TERM 2689 2056245 - 2056216 - g 91 -14.3 -3.14132 | opp_overlap 2056209 GCCGCCCGTCACCAA CTGGCGCAACGCC TGAC GGCGTTGAACCAG GCGGGCATTACCTTG modF 2055697 - 2057172 + | putative molybdenum transport ATP-binding protein ModF TERM 2690 2057214 - 2057174 - f 73 -7.5 -4.08689 | opp_overlap 2057187, overlap 2057187 GATGCAATAATTAAA TGTATTATCAGAATGGCGC CGC GCGCCATTCTGGAACCACT CTCCTTTTATTAAGA TERM 2691 2057201 - 2057187 - f 79 -11.4 -3.44794 | opp_overlap 2057187, overlap 2057174 AATGTATTATCAGAA TGGCGC CGC GCGCCA TTCTGGAACCACTCT TERM 2692 2057187 - 2057201 + F 77 -11.4 -3.29263 | opp_overlap 2057187 2057174 AATGTATTATCAGAA TGGCGC CGC GCGCCA TTCTGGAACCACTCT SPA1975 2057343 - 2058251 + | hypothetical protein TERM 2693 2058256 - 2058246 - f 72 -3.2 -5.00616 | CTCTCGCGTAAAAAA GACT GAC AGCC CCTGCCCCGTCCGTT TERM 2694 2058279 - 2058297 + F 74 -5.9 -4.62069 | overlap 2058281 CGTCCGTTTCATTCC CAGGCGC GTAAA GCGCCTC TTTTTCGGATAAAAA TERM 2695 2058281 - 2058295 + F 74 -8.5 -3.92746 | overlap 2058279 TCCGTTTCATTCCCA GGCGC GTAAA GCGCC TCTTTTTCGGATAAA galE 2058474 - 2059490 + | UDP-galactose-4-epimerase TERM 2696 2059608 - 2059591 - g 83 -9.8 -4.09685 | CCGCATCGCGCAAAA CGCCCC TGGCAG GGGGCG CAGGAAACGCCGTCT TERM 2697 2059800 - 2059830 + G 70 -5.3 -4.38712 | gap 1, overlap 2059798 2059802 2059804 2059807 GCTGATGCGCTGTCA G-AGCGCGCGCGGC ACCA GCCGCGTGATCTGC TTTTCTCCCGATCAC TERM 2698 2059807 - 2059822 + G 72 -11.8 -2.76909 | overlap 2059804 2059802 2059798 2059800 CGCTGTCAGAGCGCG CGCGGC ACCA GCCGCG TGATCTGCTTTTCTC TERM 2699 2060096 - 2060062 - g 72 -2.6 -4.83615 | opp_overlap 2060083, overlap 2060063 GATCGTTTACAAAAA GCCTACTTCGCCGAGC AGC GCTCGCCAATGCTGGT GGATTATGTCCAGCG galT 2059501 - 2060547 + | galactose-1-phosphate uridylyltransferase galK 2060550 - 2061698 + | galactokinase galM 2061692 - 2062732 + | aldose 1-epimerase gpmA 2062956 - 2063708 + | phosphoglyceromutase TERM 2700 2063779 - 2063734 - T 100 -18.6 -3.29511 | gap 1, opp_overlap 2063724 CGGATGGCGGTATAA CTGC-CTTATCCGGCCTAC GAGCAATGG GTAGGCCGGATAAGCGCAG CGCCATCAGGCAATA SPA1981 2064575 - 2063799 - | ABC transporter ATP-binding protein SPA1982 2065654 - 2064575 - | ABC transporter permease TERM 2701 2065788 - 2065772 - R 100 -10.8 -5.14563 | opp_overlap 2065772 GTCTCCAGTAAAAAA CCGGCC TTGCG GGCCGG TTTAAGACGTAATGA TERM 2702 2065772 - 2065788 + r 82 -11.5 -3.56092 | opp_overlap 2065772 GTCTCCAGTAAAAAA CCGGCCT TGC GGGCCGG TTTAAGACGTAATGA aroG 2066859 - 2065807 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2703 2066998 - 2066984 - H 83 -2.1 -5.66868 | gap 1 AATTAAGGAAAAAAA CGC-AC AAAT GTAGCG AAAAATGGGATCTAA ybgS 2067179 - 2067565 + | hypothetical protein TERM 2704 2067588 - 2067605 + F 100 -11.3 -5.54907 | opp_overlap 2067587 2067586 AAAAGTCTGATAACG GGAGAGC TTTC GCTCTCC TTTTTATTTTGTCAG ybgR 2067676 - 2068614 + | zinc transporter ZitB TERM 2705 2068620 - 2068650 + T 87 -11 -3.85698 | opp_overlap 2068615 2068622, overlap 2068622 TCACCATTAACGGGA AAGCGCGCGCGATC CTC GCTCCCGCGCGCTG TTTATCCACAGGCGG TERM 2706 2068648 - 2068622 - T 100 -13.6 -3.68244 | opp_overlap 2068620 2068622, overlap 2068615 ACCATTAACGGGAAA GCGCGCGCGATC CTC GCTCCCGCGCGC TGTTTATCCACAGGC TERM 2707 2068622 - 2068648 + T 93 -13.6 -3.51934 | opp_overlap 2068615 2068622, overlap 2068620 ACCATTAACGGGAAA GCGCGCGCGATC CTC GCTCCCGCGCGC TGTTTATCCACAGGC pnuC 2069330 - 2068611 - | pnuC protein nadA 2070398 - 2069355 - | quinolinate synthetase TERM 2708 2070643 - 2070617 - R 85 -13.8 -3.09834 | opp_overlap 2070617, overlap 2070600 2070619 CAGCGCATCAGGCAA GACCCGAACCTG CGG CAGGTTCGAATC TTCCATATTGCAGAT TERM 2709 2070641 - 2070619 - R 73 -10.6 -3.10796 | opp_overlap 2070617, overlap 2070600 2070617 GCGCATCAGGCAAGA CCCGAACCTG CGG CAGGTTCGAA TCTTCCATATTGCAG TERM 2710 2070690 - 2070660 - R 100 -19.2 -2.90763 | opp_overlap 2070667, overlap 2070667 TCCATATTGCAGATA GCAAAAAGGCGCCT TTA AGGCGCCTTTTTAC ACTGGTGGGTCGTGC TERM 2711 2070667 - 2070683 + r 100 -13.7 -4.63527 | opp_overlap 2070660 2070667 TGCAGATAGCAAAAA GGCGCCT TTA AGGCGCC TTTTTACACTGGTGG TERM 2712 2070683 - 2070667 - R 100 -13.7 -4.84527 | opp_overlap 2070667, overlap 2070660 TGCAGATAGCAAAAA GGCGCCT TTA AGGCGCC TTTTTACACTGGTGG TERM 2713 2070814 - 2070846 + r 71 -9.9 -3.19463 | opp_overlap 2070815 2070823, overlap 2070815 2070823 TTCCATATCGCAGAT AGCAAAAAAGCGCCT TTA GGGCGCTTTTTTACA TTGGTGGGTCGTGCA TERM 2714 2070845 - 2070815 - R 87 -14.9 -2.90763 | opp_overlap 2070814 2070815 2070823, overlap 2070823 TCCATATCGCAGATA GCAAAAAAGCGCC TTTAG GGCGCTTTTTTAC ATTGGTGGGTCGTGC TERM 2715 2070815 - 2070845 + r 80 -13.4 -2.51464 | opp_overlap 2070815 2070823, overlap 2070814 2070823 TCCATATCGCAGATA GCAAAAAAGCGCCT TTA GGGCGCTTTTTTAC ATTGGTGGGTCGTGC TERM 2716 2070837 - 2070823 - R 100 -8.5 -5.24989 | opp_overlap 2070815 2070814 2070823, overlap 2070815 GCAGATAGCAAAAAA GCGCC TTTAG GGCGC TTTTTTACATTGGTG TERM 2717 2070823 - 2070837 + r 100 -9.2 -5.17576 | opp_overlap 2070823 2070815, overlap 2070815 2070814 GCAGATAGCAAAAAA GCGCCT TTA GGGCGC TTTTTTACATTGGTG TERM 2718 2070893 - 2070908 + r 72 -9 -3.52539 | overlap 2070881 2070899 CCTCGCCCTACGGGC CGTTGC TGAC GCAACG TTATCCTTCACGTTC TERM 2719 2071103 - 2071118 + r 72 -9 -3.52539 | overlap 2071091 CCTCGCCCTTCGGGC CGTTGC TAAA GCAACG TTATCCTTCACGTTC TERM 2720 2071322 - 2071337 + r 72 -9 -3.52539 | overlap 2071305 2071328 CCTTGCCATGCGGGC CGTTGC TGAC GCAACG TTATCCTTCACGTTC TERM 2721 2071613 - 2071628 + r 72 -9 -3.52941 | overlap 2071601 2071619 CCTCGCCCTACGGGC CGTTGC TGAC GCAACG TTATCCTTCACGTTT TERM 2722 2071905 - 2071858 - R 90 -14.3 -3.15579 | opp_overlap 2071858 TCAACTGCTTAGGAA TCGCACGACGCGACCAGAAAA AAGGCG TTTTCTGGTCGCATGGTACGC ATTACATCGCGTTAA ybgF 2072695 - 2071907 - | hypothetical protein TERM 2723 2072369 - 2072387 + g 76 -10.2 -3.63515 | CTGGTCACCAGCTGC TGGCTGCG CTG CGCCGCCA TTATTCAAGCTCCCC TERM 2724 2072641 - 2072625 - G 100 -15.1 -4.25104 | GGCGCCTGAGCAAAA GCGGCCC AGG GGGCCGC TATGCCAACCAGTAA pal 2073229 - 2072705 - | peptidoglycan-associated outer membrane lipoprotein tolB 2074556 - 2073264 - | translocation protein TolB TERM 2725 2073661 - 2073649 - G 84 -9.1 -4.2349 | TGGTCAGAGGTAAAA GCCAG AGT CTGGC TGTCCGGGAACCAGG tolA 2075849 - 2074680 - | cell envelope integrity inner membrane protein TolA TERM 2726 2075077 - 2075087 + g 87 -8.2 -4.56597 | overlap 2075063 2075063 2075077 TCGTCGACGCCTTCT GCGG CGG CCGC TTTTTCGGCAGCCGC TERM 2727 2075077 - 2075102 + g 100 -13.2 -4.45738 | overlap 2075063 2075063 2075077 TCGTCGACGCCTTCT GCGGCGGCCG CTTTTT CGGCAGCCGC TTTCTTCTTAGCGTC TERM 2728 2075137 - 2075147 + g 83 -8.2 -4.45738 | GCTGCTTTCGCCGCC GCGG CAT CCGC TTTCTTCTTCGCCTC TERM 2729 2075407 - 2075417 + g 85 -2.4 -5.46657 | GCCGCTTTCGCCGCC TCGG CCT CCGC TTTTTTCTTCGCGTC TERM 2730 2075588 - 2075601 + g 87 -8.1 -4.67556 | GCAGCTCCTCTGCTT GCTGC TGTT GCAGC TTTTTACGCTCTTCT tolR 2076342 - 2075914 - | colicin uptake protein TolR tolQ 2077038 - 2076346 - | colicin uptake protein TolQ TERM 2731 2076855 - 2076815 - G 71 -11.2 -2.88544 | gap 1, opp_overlap 2076815 TCCGAGCCCGACAGA CTATCGCGTCT-CCCCTGG CTTT CCTGGTACAGACGCGATAG TTCGATTCCGGACCA ybgC 2077439 - 2077035 - | acyl-CoA thioester hydrolase YbgC TERM 2732 2077647 - 2077622 - R 93 -9.1 -4.82154 | opp_overlap 2077622 AAGGGAGAGTAAAAA TATATGGGCTT ATGC AAGCCCCTATA TTTTTAAGGAGGTTT TERM 2733 2077622 - 2077647 + r 89 -9.1 -4.58685 | opp_overlap 2077622 AAGGGAGAGTAAAAA TATATGGGCTT ATGC AAGCCCCTATA TTTTTAAGGAGGTTT ybgE 2077949 - 2077668 - | hypothetical protein TERM 2734 2077926 - 2077899 - G 78 -12.1 -3.21416 | gap 1, opp_overlap 2077904, overlap 2077904 TATCGCCATCACGAA GGA-AAGCGCCC TTAAG GGGCGCTTGTCC ATTACCGCATAAATA TERM 2735 2077904 - 2077920 + g 75 -11.5 -3.41878 | opp_overlap 2077904 2077899 CCATCACGAAGGAAA GCGCCCT TAA GGGGCGC TTGTCCATTACCGCA TERM 2736 2077920 - 2077904 - G 83 -10.8 -3.97042 | opp_overlap 2077904, overlap 2077899 CCATCACGAAGGAAA GCGCCC TTAAG GGGCGC TTGTCCATTACCGCA ybgT 2078274 - 2078161 - | hypothetical protein cydB 2079428 - 2078289 - | cytochrome d ubiquinol oxidase subunit II cydA 2081012 - 2079444 - | cytochrome d ubiquinol oxidase subunit I TERM 2737 2080725 - 2080704 - G 76 -10.9 -3.7282 | overlap 2080714 2080715 GGATTCGAGGAAGAA GGCCATCAA ACCT TCGATGGCC AGCGGCGCACCGAAG TERM 2738 2080741 - 2080714 - G 73 -9.2 -3.77607 | gap 1, overlap 2080704 2080715 AAGAAGGCCATCAAA CCTTCGATG-GCC AGC GGCGCACCGAAGA TGTCCCCAACATAGT TERM 2739 2082548 - 2082530 - R 100 -11.7 -5.33866 | overlap 2082519 TAAAGCCATAAAAAA GGCCACC GTAAA GGTGGCC AACCATGTCGAAAAC TERM 2740 2082570 - 2082595 + r 87 -6.9 -5.22137 | overlap 2082571 GTCGAAAACGGACAT TTATCTGTTCC CGCA GGAACAGAGAG TTTTATTTTATAATT TERM 2741 2082571 - 2082594 + r 72 -8.2 -3.70842 | overlap 2082570 TCGAAAACGGACATT TATCTGTTCC CGCA GGAACAGAGA GTTTTATTTTATAAT sucD 2083467 - 2082598 - | succinyl-CoA synthetase subunit alpha sucC 2084633 - 2083467 - | succinyl-CoA synthetase subunit beta TERM 2742 2083562 - 2083575 + g 74 -9.5 -3.73068 | CAGCCAGTTTCTTCG CGCCG AGTT CGGCG TTGTTGCCTTCCAGA TERM 2743 2084207 - 2084228 + g 78 -5.7 -4.70659 | opp_overlap 2084209, overlap 2084209 CGACTTTATGGATCA GATGCGGGG TTTC CTCCGCGAC TTTTTCGATCTCCAC TERM 2744 2084416 - 2084440 + g 74 -4.9 -4.77157 | overlap 2084412 CCCAGCCAGTTTTCC GCAAAGGCGCG AAT CTCTTCTTTGC TTTTTACTACCTTCA sucB 2085983 - 2084775 - | dihydrolipoamide acetyltransferase kgd 2088799 - 2085998 - | alpha-ketoglutarate decarboxylase TERM 2745 2087353 - 2087363 + g 79 -3.2 -5.1417 | CGTAGATTTTACGCG GCGT CGG ATGC TTTTTGATTTTCTGG TERM 2746 2088998 - 2088976 - R 74 -10.6 -3.25823 | opp_overlap 2088972, overlap 2088977 2088979 CGCCGTGGATACTAA CCACGCATAC GCT GTATGCGTGC CGGGGTTCATTTGTT TERM 2747 2088997 - 2088977 - R 83 -14.1 -2.55351 | opp_overlap 2088972, overlap 2088976 2088979 GCCGTGGATACTAAC CACGCATAC GCT GTATGCGTG CCGGGGTTCATTTGT TERM 2748 2088995 - 2088979 - R 74 -10.9 -2.81547 | opp_overlap 2088972, overlap 2088977 2088976 CGTGGATACTAACCA CGCATAC GCT GTATGCG TGCCGGGGTTCATTT sdhB 2090044 - 2089325 - | succinate dehydrogenase iron-sulfur subunit sdhA 2091824 - 2090058 - | succinate dehydrogenase flavoprotein subunit TERM 2749 2091094 - 2091040 - G 81 -12.7 -3.09516 | gap 1, opp_overlap 2091048 TTGTTCAGCAGGTAA CCGCCTTCGCCGCGGCAG-CCTTCTG TCAC CAGCACGCCCGCCCCGGCGATGCCGG TCGGGTGGAACTGCC sdhD 2092171 - 2091824 - | succinate dehydrogenase cytochrome b556 small membrane subunit sdhC 2092554 - 2092165 - | succinate dehydrogenase cytochrome b556 large membrane subunit TERM 2750 2092955 - 2092945 - R 80 -5.4 -4.95758 | ACGACACCAGAAAAA GCAT ATA ATGC GTAAAAGTTATGGGG SPA2012 2093208 - 2092963 - | hypothetical protein TERM 2751 2093346 - 2093331 - g 77 -4.7 -4.85433 | ATACAAAGGCAAAAA TCACC CTTACT GGTGA TACTGCTATTGAACT gltA 2093309 - 2094592 + | type II citrate synthase TERM 2752 2094596 - 2094633 + F 81 -8.3 -4.55016 | opp_overlap 2094600, overlap 2094597 2094600 CTGAAGCGTTAATTG ACAACCGGATGGCGACG CAAC CCTCGCCATCCGGTACA TTTTCCCTTTTTTCT TERM 2753 2094597 - 2094632 + F 82 -11.8 -3.30569 | opp_overlap 2094600, overlap 2094596 2094600 TGAAGCGTTAATTGA CAACCGGATGGCGACG CAAC CCTCGCCATCCGGTAC ATTTTCCCTTTTTTC TERM 2754 2094600 - 2094629 + F 100 -17.9 -2.79535 | opp_overlap 2094600, overlap 2094597 2094596 AGCGTTAATTGACAA CCGGATGGCGACG CAAC CCTCGCCATCCGG TACATTTTCCCTTTT TERM 2755 2094629 - 2094600 - f 100 -17.9 -3.42056 | opp_overlap 2094600 2094597 2094596 AGCGTTAATTGACAA CCGGATGGCGACG CAAC CCTCGCCATCCGG TACATTTTCCCTTTT TERM 2756 2095721 - 2095738 + G 100 -9.1 -4.87803 | overlap 2095722 CAGCATTCTTTTAAC TGGGCCA GCAG TGGCCCG TTTTATTTCAACCTA TERM 2757 2095722 - 2095737 + G 74 -10.4 -3.51958 | overlap 2095721 AGCATTCTTTTAACT GGGCCA GCAG TGGCCC GTTTTATTTCAACCT abrB 2094729 - 2095775 + | hypothetical protein nei 2096621 - 2095830 - | endonuclease VIII SPA2016 2096807 - 2096670 - | hypothetical protein SPA2017 2098824 - 2096875 - | putative glycosyl transferase TERM 2758 2097817 - 2097798 - G 72 -3.6 -4.77036 | gap 1 TCTTACCACCAAAAA GATGC-CAA ATC CTGTGCATC GGCCAATCAGTCATC SPA2018 2099661 - 2098828 - | hypothetical protein SPA2019 2101632 - 2099854 - | putative glycosyltransferase, cell wall biogenesis TERM 2759 2101104 - 2101121 + g 70 -3.4 -4.82756 | AACGATCTTTAAATT CGCTCT GGGTTA AGAGTG TTTTATTAATTCTAT SPA2020 2102436 - 2101726 - | putative polysaccharide export ABC transporter ATP-binding protein TERM 2760 2102867 - 2102855 - R 72 -4.9 -4.58466 | GGTATAATGATAAAA TTATG CAA CATAA TCATAAACTGCCGAT SPA2021 2104472 - 2103339 - | galactosyltransferase SPA2022 2106555 - 2105377 - | UDP-galactopyranose mutase TERM 2761 2106360 - 2106348 - G 70 -2.7 -4.78107 | TATCAGTATGAAAAA TATGA GGA CCATA AACGTGCACCATAAT SPA2023 2107554 - 2106814 - | hypothetical protein TERM 2762 2107320 - 2107308 - G 74 -2.6 -5.0133 | TACTGCTGCAAAAAA CCAC TGTCC GCGG ATAACGCTGAAAAAC SPA2025 2108916 - 2108350 - | DNA recombinase TERM 2763 2108858 - 2108877 + g 70 -2.8 -4.74453 | gap 1, overlap 2108856 TCCGGGAAGGGCATT CTGTCGGTC GCT GACAG-CAG TTTTTCAATCTCTTC SPA2026 2109107 - 2108976 - | hypothetical protein ybgL 2110164 - 2109430 - | hypothetical protein ybgK 2111086 - 2110154 - | hypothetical protein ybgJ 2111736 - 2111080 - | hypothetical protein ybgI 2112495 - 2111752 - | putative hydrolase-oxidase TERM 2764 2112787 - 2112769 - H 74 -6 -4.56969 | overlap 2112784 2112785 AAGCCCACAAAGAAA GGCATTAT CTG AGAATGCC GCGTTCTTGCCGCAG ybgH 2112824 - 2114305 + | PTR2-family transport protein TERM 2765 2114314 - 2114339 + T 100 -16.9 -2.87463 | opp_overlap 2114314, overlap 2114334 2114335 ATCCTGATAGCAGAA GGCCCGGTAGT TTGC GCTACCGGGCC TGTATCACGCCCCTT TERM 2766 2114339 - 2114314 - T 100 -16.2 -3.4678 | opp_overlap 2114314 2114334 2114335 ATCCTGATAGCAGAA GGCCCGGTAG TTTGCG CTACCGGGCC TGTATCACGCCCCTT phrB 2115765 - 2114344 - | deoxyribodipyrimidine photolyase TERM 2767 2115133 - 2115145 + g 75 -6.2 -4.63218 | opp_overlap 2115080 AAAATGACGTAGCTG CGCG ATGAC CGCG TTTTCTTCCACCGGG TERM 2768 2115849 - 2115835 - R 100 -11.4 -5.60993 | opp_overlap 2115835 TGGCGCATAAAAAAA CCGCCA GCG TGGCGG CTGACGGTTTTTCAG TERM 2769 2115835 - 2115856 + r 80 -7.2 -4.60487 | opp_overlap 2115835 TGGCGCATAAAAAAA CCGCCAGC GTGGCG GCTGACGG TTTTTCAGGCTGGTC ybfA 2116082 - 2115876 - | hypothetical protein TERM 2770 2116305 - 2116316 + H 73 -2.2 -5.14894 | TCATTGGTTAAATAA TGGT CTTT GCCA TTTTTATACTTTTTT TERM 2771 2116433 - 2116457 + G 70 -9.3 -3.72395 | opp_overlap 2116438, overlap 2116438 TGTGAGTGCAGGCGT GATAACCGGCA TCG TGCTGGTTTTC TTACTTTTAGGTTAT TERM 2772 2116438 - 2116452 + G 91 -7.8 -4.89562 | opp_overlap 2116438, overlap 2116433 GTGCAGGCGTGATAA CCGGCA TCG TGCTGG TTTTCTTACTTTTAG SPA2034 2116311 - 2116508 + | hypothetical protein TERM 2773 2117494 - 2117481 - g 83 -8.1 -4.44046 | opp_overlap 2117489 TGGAGGGTAAAGAAA CACGC TTTG GCGTG CTGGCCAGCAGCCTG kdpA 2116508 - 2118187 + | potassium-transporting ATPase subunit A TERM 2774 2119664 - 2119629 - g 74 -11.1 -3.30441 | gap 1, opp_overlap 2119621 2119620 GATCACTGGCGATAA CCGCCTGACGGCGGCA GCGAT TGCCGCCGA-AGCCGG TGTGGACGATTTTCT kdpB 2118208 - 2120256 + | potassium-transporting ATPase subunit B kdpC 2120262 - 2120849 + | potassium-transporting ATPase subunit C TERM 2775 2121564 - 2121546 - g 72 -11.7 -2.82516 | GCGTGGACGATCAGA TGCGCGC CTGGC GCGCGCA TCCGGGCGAAGAAAA TERM 2776 2121881 - 2121909 + G 95 -14.5 -3.53563 | opp_overlap 2121865 GTCATGGGCCGCCCG GCGTCGCGACGCT GGT GGCGACGTGACGC TTTCGCCGACCGTCT TERM 2777 2123364 - 2123396 + G 76 -10.4 -3.63068 | opp_overlap 2123363, overlap 2123365 2123389 2123391 GCGGCAACAAAGAGT CCGCCGTCCCCGGC GTGGG GCTGGGGCTGGCGA TTTGCCATGCTATCG TERM 2778 2123365 - 2123395 + G 79 -13.9 -2.7752 | opp_overlap 2123363, overlap 2123364 2123389 2123391 CGGCAACAAAGAGTC CGCCGTCCCCGGC GTGGG GCTGGGGCTGGCG ATTTGCCATGCTATC kdpD 2120846 - 2123530 + | sensor protein KdpD kdpE 2123527 - 2124204 + | DNA-binding transcriptional activator KdpE TERM 2779 2126085 - 2126074 - g 84 -3 -5.29782 | CAGATCCATAAAAAA GATA GCCA TATC AAAGGGCAATCGCGC speF 2124967 - 2127165 + | ornithine decarboxylase TERM 2780 2128324 - 2128314 - g 74 -6.8 -4.25104 | opp_overlap 2128314 2128315 GTGCCGTCATCAAAA GCGA AAG TCGC TAACTTCGTGGCCTT potE 2127162 - 2128481 + | putrescine transporter TERM 2781 2128488 - 2128473 - f 70 -2.4 -4.91473 | opp_overlap 2128487 GAATTGAAAAATAAA CACGGC TGAT GGCGCG CCCGGGCTGCGGTAA TERM 2782 2128487 - 2128517 + F 89 -11 -4.17089 | opp_overlap 2128473, overlap 2128488 ACACGGCTGATGGCG CGCCCGGGCTGCGG TAA CGGTAGTCCGGGCA TTTTCACACTTTGAA TERM 2783 2128488 - 2128516 + F 88 -14.5 -3.09772 | overlap 2128487 CACGGCTGATGGCGC GCCCGGGCTGCGG TAA CGGTAGTCCGGGC ATTTTCACACTTTGA SPA2042 2128546 - 2129031 + | 5-nitroimidazole antibiotic resistance TERM 2784 2129089 - 2129046 - T 79 -10.4 -3.50045 | gap 1 AGTCAGATATCACAA GCGCCTTATCCGGCCTGGA GGCGATT TACAGGCCTGATAA-GCGC AGCGCCGTTAATACA TERM 2785 2129104 - 2129131 + T 77 -11.4 -3.1247 | opp_overlap 2129110, overlap 2129110 CAGCGCCGTTAATAC AAAAAAGGAGCC GTAA GGCTCCTTTTTC TTCCATATCGCCCAT TERM 2786 2129110 - 2129125 + T 100 -10.4 -5.12068 | opp_overlap 2129110, overlap 2129104 CGTTAATACAAAAAA GGAGCC GTAA GGCTCC TTTTTCTTCCATATC TERM 2787 2129125 - 2129110 - T 100 -10.4 -5.47159 | opp_overlap 2129110 2129104 CGTTAATACAAAAAA GGAGCC GTAA GGCTCC TTTTTCTTCCATATC TERM 2788 2129140 - 2129152 + T 78 -6.2 -4.7078 | CTTTTTCTTCCATAT CGCC CATCA GGCG TTTTTCAATACTTCG pgm 2130786 - 2129146 - | phosphoglucomutase TERM 2789 2130370 - 2130387 + g 85 -2.5 -5.55769 | opp_overlap 2130368, overlap 2130372 CGTAATGACAATACC GTCTGCC AGCG GGCCGCC TTTTTTGTTATGGAC seqA 2131353 - 2130811 - | replication initiation regulator SeqA TERM 2790 2131098 - 2131087 - G 71 -7.2 -4.03093 | opp_overlap 2131087, overlap 2131078 CAGAATCAGCATAAA GCGG TTGA CCGC TTTTTTCTGCTCGGC TERM 2791 2131087 - 2131098 + g 100 -7.2 -5.31275 | opp_overlap 2131078 2131087 CAGAATCAGCATAAA GCGG TTGA CCGC TTTTTTCTGCTCGGC ybfF 2131538 - 2132308 + | hypothetical protein TERM 2792 2132320 - 2132358 + F 80 -13.1 -2.57244 | gap 1, opp_overlap 2132320 2132321 2132322 2132324, overlap 2132316 CTAACTGATTAAAAA C-TCATCGCCTGTGCGCG ATTA CGCGCGCGGGCGTTGGCG TCGCTTCCTCGCTGA TERM 2793 2132356 - 2132320 - f 100 -10 -4.77157 | gap 1, opp_overlap 2132320 2132316, overlap 2132321 2132322 2132324 CTAACTGATTAAAAA CTCATCGCCTGTGCGCG ATTA CGCGCGCGGGCGTTG-G CGTCGCTTCCTCGCT TERM 2794 2132356 - 2132321 - f 77 -10.2 -3.45571 | opp_overlap 2132320 2132316, overlap 2132320 2132322 2132324 TAACTGATTAAAAAC TCATCGCCTGTGCGCG ATTA CGCGCGCGGGCGTTGG CGTCGCTTCCTCGCT TERM 2795 2132355 - 2132322 - f 83 -13.7 -2.6662 | opp_overlap 2132320 2132316, overlap 2132320 2132321 2132324 AACTGATTAAAAACT CATCGCCTGTGCGCG ATTA CGCGCGCGGGCGTTG GCGTCGCTTCCTCGC TERM 2796 2132353 - 2132324 - f 72 -10.5 -2.86601 | opp_overlap 2132320 2132316, overlap 2132322 2132320 2132321 CTGATTAAAAACTCA TCGCCTGTGCGCG ATTA CGCGCGCGGGCGT TGGCGTCGCTTCCTC ybfE 2132442 - 2132735 + | LexA regulated protein fldA 2132886 - 2133416 + | flavodoxin FldA TERM 2797 2133576 - 2133592 + F 75 -6.5 -4.55128 | CAGTTTTATTAACAT CTGCGAG AGA CTTGCGG TTTTCATTTCGGCAT fur 2133698 - 2134150 + | ferric uptake regulator TERM 2798 2134186 - 2134169 - f 75 -11.3 -3.03635 | opp_overlap 2134169 TAAATCTTTCGAAGA GCCAACC GCCC GGTTGGC TTTTTTATATCCTCC TERM 2799 2134169 - 2134186 + F 100 -11.3 -5.39721 | opp_overlap 2134169 TAAATCTTTCGAAGA GCCAACC GCCC GGTTGGC TTTTTTATATCCTCC TERM 2800 2134732 - 2134713 - g 82 -5.6 -4.98672 | TTCAAAAAGATAAAA TCCTGCGC TGGA GCGCCAGA CCGATCCTTGAAGAA SPA2049 2134265 - 2135191 + | LysR family transcriptional regulator TERM 2801 2135640 - 2135651 + G 90 -5.8 -5.24129 | GCGCTCCACGTTGCG CGCA CCAA TGCG TTTTTTATGGGCGGC TERM 2802 2135889 - 2135879 - g 81 -8.2 -4.36914 | opp_overlap 2135881, overlap 2135880 2135881 GGCCTGGGGAGAAAA CGCC CGC GGCG AATGGCCCGCGGATA TERM 2803 2135916 - 2135926 + G 77 -8.2 -4.07687 | GATAATTTCCTGATT CGCG GCA CGCG TTTTAACCAGGGCGT TERM 2804 2136027 - 2136043 + G 71 -10.1 -3.57674 | overlap 2136025 ATTGATGCCAGGGCG CCGCTGT ACG ACGGCGG TATTTGTACTCGCGT TERM 2805 2136661 - 2136648 - g 71 -9.5 -3.48395 | ATTGCGGGGATAGAA GCCGC CCGC GCGGC ACACAAGGAGGCGCA SPA2050 2135289 - 2136692 + | tricarballylate dehydrogenase SPA2051 2136679 - 2137818 + | citB-like protein TERM 2806 2138203 - 2138240 + G 89 -13.4 -3.6279 | opp_overlap 2138203, overlap 2138204 CCGGCTACCAAACGA TCGGCCTGGCAGCGCC TGCGTT GGTGCTGTTGGGCCGG TTATTACAAGGATTT TERM 2807 2138204 - 2138239 + G 83 -14.7 -2.77192 | opp_overlap 2138203, overlap 2138203 CGGCTACCAAACGAT CGGCCTGGCAGCGCC TGCGTT GGTGCTGTTGGGCCG GTTATTACAAGGATT TERM 2808 2138599 - 2138627 + G 90 -5.3 -5.18371 | gap 1 TTATTACGGCCGGAA CGCTGCTGGTGG CGATGA CCACCA-CAACG TTTTATTTTATCACC citA 2137869 - 2139173 + | citrate-proton symporter TERM 2809 2139205 - 2139179 - T 100 -13.7 -5.07107 | TAAAGCCTGAAAAAA CCACGGGCGGA AAACA TTCGCCCGTGG GTGGCAAGGCAGGTT ybfN 2139554 - 2139222 - | putative lipoprotein TERM 2810 2139597 - 2139571 - R 80 -12.2 -3.01712 | GGTCGTTCCTCAACA GCGCGGCAGGCC GGC AGCCTGCCGCAT CTGACATCAGAAAAT ybfM 2141010 - 2139604 - | putative outer membrane protein TERM 2811 2140930 - 2140909 - G 75 -5.7 -4.57569 | overlap 2140910 GGAGTCGTCGAAAAA GCCGGAGGC TTGC GCCTGCGGA ACAACGATCCACCCC TERM 2812 2141628 - 2141612 - R 100 -11.5 -5.38951 | opp_overlap 2141612 AATGCAGAGAAAAAA CGCCGCA GAA CGCGGCG TTGATAAGGTATTTT TERM 2813 2141612 - 2141628 + r 74 -10.8 -3.19851 | opp_overlap 2141612 AATGCAGAGAAAAAA CGCCGC AGAAC GCGGCG TTGATAAGGTATTTT glnS 2143338 - 2141671 - | glutaminyl-tRNA synthetase TERM 2814 2142310 - 2142322 + g 93 -10.5 -4.42639 | ATCGATTACCGCCAT CGCGC GCG GCGCG TTTTCGTTCAGATCT TERM 2815 2142443 - 2142425 - G 74 -9.5 -3.66556 | AACTCCCGAATAGAA GCCGCGG TGTAG CCGCGAC GGCGCAGACCGGAAA TERM 2816 2143490 - 2143467 - R 100 -7.4 -5.75342 | gap 1, opp_overlap 2143467 TTGCGGTAAAAAAAA GCGGC-GAAAG TTC CCCTCTGCCGC TTATGTTTCCTGTGA nagE 2145501 - 2143549 - | N-acetyl glucosamine specific PTS system components IIABC TERM 2817 2145528 - 2145544 + H 100 -8.7 -5.58179 | overlap 2145521 2145529 TACGAGACGCCGATA TGGCTTC TTT GAAGCCG TTTTTTATTGTGCTG TERM 2818 2145529 - 2145543 + H 80 -10 -3.9328 | overlap 2145521 2145528 ACGAGACGCCGATAT GGCTTC TTT GAAGCC GTTTTTTATTGTGCT TERM 2819 2145647 - 2145627 - H 73 -7.7 -4.08394 | AGAGTGTGTGGAAAA TTAATTCGC CTC GCAAATTAA ACGGGTGTTTTTTGT TERM 2820 2146596 - 2146579 - g 74 -7.1 -4.37198 | opp_overlap 2146581 AACTTAAAGTTAAAA CATTGAA ATAT TTCAATG AATTAGAAGCAGAAA nagB 2145828 - 2146628 + | glucosamine-6-phosphate deaminase TERM 2821 2146634 - 2146666 + F 82 -7 -4.8048 | gap 1, overlap 2146634 2146637 AGGTCTGTAATGTTG TCT-CCGCCCCGC CAGTCAAT GCGGGGCGGTAAA TTTTTGATATCGGGG TERM 2822 2146637 - 2146662 + F 87 -14.7 -2.87672 | overlap 2146634 2146634 TCTGTAATGTTGTCT CCGCCCCGC CAGTCAAT GCGGGGCGG TAAATTTTTGATATC TERM 2823 2147041 - 2147012 - g 73 -9.4 -3.80114 | gap 1, overlap 2147015 GATGAATTGATGAAA CAGGGCATTCGCG TCATG CGCGAATACC-TG GAAAAACATCCGCAC TERM 2824 2147039 - 2147015 - g 72 -12.2 -2.68381 | overlap 2147012 GAATTGATGAAACAG GGCATTCGCG TCATG CGCGAATACC TGGAAAAACATCCGC TERM 2825 2147483 - 2147471 - g 70 -9.1 -3.66356 | ATTCGCAATGCCAAA CGCCT GAA AGGCG ACAAACTTTGTCTGG nagA 2146688 - 2147842 + | N-acetylglucosamine-6-phosphate deacetylase nagC 2147847 - 2149067 + | N-acetylglucosamine repressor TERM 2826 2149239 - 2149216 - g 87 -8 -4.58395 | GGGATTCTGGAAAAA GGTCTGCCGC TGGT GCTGCTGACC AATTACCCGTCGCAA TERM 2827 2149614 - 2149626 + G 73 -6.2 -4.52589 | opp_overlap 2149611 CATTGAAAAAATTTC CGGC CGGAA GCCG TTTTATGTCGGCAAA nagD 2149114 - 2149866 + | UMP phosphatase TERM 2828 2150800 - 2150785 - T 78 -5.4 -4.87665 | gap 1, overlap 2150786 CGTCACCGACAAAAA CGCGCTG CGT CAG-GCG CTGGAAGAATCCGTG TERM 2829 2150923 - 2150903 - T 87 -6.8 -5.2189 | GCAATCACCAAAAAA TTCGCCGC CCGTC GCGTCGAA GATCAGGAGCGCTCC TERM 2830 2151836 - 2151851 + T 100 -10.4 -5.60993 | opp_overlap 2151836 TTAACGATGACGAAA GAGCCC TTAG GGGCTC TTTTTTTATAGCAAA TERM 2831 2151851 - 2151836 - T 83 -10.4 -3.82031 | opp_overlap 2151836 TTAACGATGACGAAA GAGCCC TTAG GGGCTC TTTTTTTATAGCAAA TERM 2832 2152660 - 2152644 - T 72 -5.1 -4.60041 | AGCCAGTTTTAAAAA CGCTC TGCTAAT GAGCG CAAGAAGTACGACAA TERM 2833 2152756 - 2152783 + T 86 -13.6 -3.2362 | opp_overlap 2152762, overlap 2152762 TACCCCAGCCACCTT TAAAAAGCTCGC TTCG GCGAGCTTTTTG CTTTTCTGGCAATTC TERM 2834 2152777 - 2152762 - T 93 -10.4 -4.60041 | opp_overlap 2152756 2152762 AGCCACCTTTAAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTTCTGG TERM 2835 2152762 - 2152777 + T 100 -10.4 -5.1417 | opp_overlap 2152762, overlap 2152756 AGCCACCTTTAAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTTCTGG ubiF 2154057 - 2152882 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 2836 2153428 - 2153416 - G 71 -4.7 -4.62302 | overlap 2153406 GAACAGCGGCAAAAA GGCGC GCG GCCCC GTTGGCGTAAACTGC TERM 2837 2153441 - 2153467 + g 86 -10.9 -4.14392 | gap 1, opp_overlap 2153440 2153441 CCCGTTGGCGTAAAC TGCTGCCAGGTG CTGT CGCCTGGC-GCA TTTTCACACTTGACG miaB 2154159 - 2155625 + | MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase)) TERM 2838 2155648 - 2155671 + F 73 -11 -2.53715 | gap 1, opp_overlap 2155638 2155646 2155648, overlap 2155647 GGAAAGGCAATAATA CCCGAT-GGCG CTA CGCCTGTCGGG CTTCCTGGTCATGGC TERM 2839 2155671 - 2155648 - f 70 -8.8 -3.46873 | gap 1, opp_overlap 2155648 2155647, overlap 2155638 2155646 GGAAAGGCAATAATA CCCGA-TGGCG CTA CGCCTGTCGGG CTTCCTGGTCATGGC TERM 2840 2155677 - 2155709 + F 72 -4.8 -4.6955 | gap 1, overlap 2155680 2155680 GCCTGTCGGGCTTCC TGGTCATGGCCTGTC GCCC GACGGGCCTTG-CAA TTTTCTCTCTTCATC ybeZ 2155791 - 2156876 + | PhoH-like ATP-binding protein ybeY 2156873 - 2157346 + | putative metalloprotease TERM 2841 2157564 - 2157551 - g 75 -3.8 -4.946 | AGTAAACAGTAAAAA GGGA TTTTTT TCCC TGCTACTCAGCCAGC TERM 2842 2158155 - 2158180 + G 71 -9.9 -3.53343 | gap 1 ACGATTCGCGCGCTG GCGTCGATTGAA GAC TTCAAT-GACGC TTTCGGCACCCACTT ybeX 2157504 - 2158382 + | haemolysin-related protein TERM 2843 2158465 - 2158481 + G 80 -9.3 -4.07868 | overlap 2158439 GCGTTATTATTCGGC GCCTGCG GAA CGCTGGC TTTCTCTCCGTATGA TERM 2844 2158797 - 2158757 - g 75 -6 -4.56597 | gap 1 GCCTGTGGCCAAAAA CCA-ACTGGCTGCGCGTCG CTAT CGCCGCGCCTGCAGTATGG CAAATCACCGAATTT lnt 2158402 - 2159940 + | apolipoprotein N-acyltransferase ybeJ 2160277 - 2161203 + | glutamate and aspartate transporter subunit TERM 2845 2161326 - 2161342 + F 100 -12.3 -5.76949 | GGCAACAATCTTCGA GGGTAGC GCT GCTACCC TTTTTTTTCGGAGTA gltJ 2161363 - 2162103 + | glutamate/aspartate transport system permease protein GltJ TERM 2846 2162702 - 2162712 + G 72 -2.4 -4.92812 | CGAAATGATTCTGTT CGCC GGC GCCG TTTATTTTGTTATCA gltK 2162103 - 2162777 + | glutamate/aspartate transport system permease protein GltK gltL 2162777 - 2163502 + | glutamate/aspartate transport ATP-binding protein GltL TERM 2847 2163511 - 2163532 + F 82 -13 -2.90714 | GCACTAATCTTCCCG GCGCGCAC GTCAGA GTGCGCGC TATCTCACGCTTTAC rihA 2163619 - 2164554 + | ribonucleoside hydrolase 1 SPA2080 2164586 - 2165137 + | putative cytoplasmic protein TERM 2848 2165412 - 2165389 - T 82 -13.2 -3.04263 | gap 1 ACTGCACGCTTAACA TG-GCGGACGG CAA CCGTCCGCTCA CGATAATGAACCTTA ybeL 2165898 - 2165425 - | hypothetical protein SPA2082 2167919 - 2165991 - | putative sigma-54 dependent transcriptional regulator TERM 2849 2167939 - 2167967 + r 84 -8.2 -4.64861 | gap 1, opp_overlap 2167946, overlap 2167944 CACCATCCTGTTGGT TTATGAACGGGCG AAAC CGCCCG-TCGTGA TTTATTTTCCGCCGA TERM 2850 2167961 - 2167946 - R 79 -11.8 -3.14132 | opp_overlap 2167944 2167939 CTGTTGGTTTATGAA CGGGCG AAAC CGCCCG TCGTGATTTATTTTC SPA2083 2168940 - 2167987 - | 2-keto-3-deoxygluconate permease TERM 2851 2168982 - 2168961 - R 75 -10.1 -3.54653 | opp_overlap 2168961 2168962, overlap 2168962 ATTCCCAGGAGATAA CCGGACAGC TTGT GCTGCCCGA TTTGGTATCAGAACG TERM 2852 2168981 - 2168962 - R 73 -11.4 -2.72471 | opp_overlap 2168962 2168961, overlap 2168961 TTCCCAGGAGATAAC CGGACAGC TTGT GCTGCCCG ATTTGGTATCAGAAC SPA2084 2170162 - 2168990 - | putative hydrolase C-terminus SPA2085 2170520 - 2170179 - | putative hydrolase N-terminus TERM 2853 2171102 - 2171086 - g 76 -5.1 -4.8048 | opp_overlap 2171086, overlap 2171087 2171089 CGCGTACATGAAAAA CCAGC TCAAAAC GCTGG GTTTTGGCTATGACT TERM 2854 2171671 - 2171660 - g 81 -3.6 -5.28778 | ACCATGGAGAAAAAA GGCG TCGA CACC GGCTATAAAGCGATT leuS 2170757 - 2173339 + | leucyl-tRNA synthetase TERM 2855 2173412 - 2173445 + G 84 -13.9 -3.05463 | TCACCGCCGGATGCG GCTGGCATCTGCGTA GCAC TACGCAGGTTCCGGC TTCAATGAAAACGAT TERM 2856 2173585 - 2173553 - g 75 -11.3 -3.3353 | overlap 2173549 2173556 TGCTTGATAAAGACA CAACGCGCAAAGACG TTC CGTCTCTGCGGCTTG GAACGGTGACTATTT TERM 2857 2173581 - 2173556 - g 80 -10.5 -3.80279 | gap 1, overlap 2173553 2173549 TTGATAAAGACACAA CGCGCAAAGACG TTC CGTCTCTGCG-G CTTGGAACGGTGACT TERM 2858 2173839 - 2173804 - g 74 -8.2 -3.98661 | opp_overlap 2173838 GAGATGTACGACAAA GCCGCTGAACAGCTGA TTCG TAAGCTGACCAGCGTC CGCGCGGCGGATATT TERM 2859 2173907 - 2173867 - g 76 -10.2 -3.74872 | overlap 2173887 ATTCAGGCGACGAAA GAGGAGGCTACCGCCGAC AATGA GACGGCGGCGCCCGCCTC TACGCCAGCACGCGT rlpB 2173354 - 2173944 + | LPS-assembly lipoprotein RplB TERM 2860 2173969 - 2174003 + G 76 -12.2 -3.00923 | gap 1, opp_overlap 2173968 2173969, overlap 2173998 TGTATCCTGAACAAC T-CCGCGCGCAGCTC AACGAA GGGCTGCGTGCGGCA TATCTGCTATTGGGC TERM 2861 2174107 - 2174133 + G 73 -5.9 -4.45083 | gap 1, overlap 2174108 ACCACGCTTTTACTC TCGATC-CCAGT ACCG ACTGGGGATCGC TTTTCTCACTCTGCC holA 2173944 - 2174975 + | DNA polymerase III subunit delta TERM 2862 2175275 - 2175285 + G 81 -8.2 -4.30719 | AACAGGGTCCCGAAG CGCC GCT GGCG TTTATTATCGGCCAG nadD 2174977 - 2175618 + | nicotinic acid mononucleotide adenylyltransferase cobD 2176687 - 2175593 - | threonine-phosphate decarboxylase TERM 2863 2175858 - 2175838 - G 73 -8.9 -3.89346 | overlap 2175852 GGGGGAGCTGACAAA GCGCCTGAT AAA ACCGGGCGC CCTCCTCCCGTAACC TERM 2864 2176204 - 2176190 - G 79 -11.4 -3.61894 | AATGGCCTGTAATAA CTGCCG CTC CGGCAG CAGACCGGTAGGATT TERM 2865 2176728 - 2176707 - H 70 -2.3 -5.00616 | CCTCCGGCCAAAAAA CGCTATTTT AGTG AAAAAAACG TTGCGCAATCAGGGG cobC 2176784 - 2177392 + | alpha-ribazole-5'-phosphate phosphatase TERM 2866 2177575 - 2177563 - f 79 -10.5 -3.61103 | opp_overlap 2177562 TAATCTGATTTTAAA CGCCG ATC CGGCG ACATAAGTCCCGGTA TERM 2867 2177628 - 2177616 - f 72 -10.5 -2.8655 | TTCAGGTATACTACA CGGCG TCC CGCCG GAAGGTTAGCGTTAA TERM 2868 2177787 - 2177760 - g 75 -7 -4.42386 | overlap 2177761 TTGTTATCGACAAAA TTGATGACCTGA AAGG TCAGGACATCAT CGCCTTAGATGTTCA TERM 2869 2177786 - 2177761 - g 71 -10.5 -3.2511 | overlap 2177760 TGTTATCGACAAAAT TGATGACCTGA AAGG TCAGGACATCA TCGCCTTAGATGTTC ybeB 2177720 - 2178037 + | hypothetical protein ybeA 2178041 - 2178508 + | SPOUT methyltransferase superfamily protein TERM 2870 2178598 - 2178610 + G 78 -6.2 -4.80396 | ACTGTTTGTGCGTCG GGCG CTGGT CGCC TTTTTGGGTATTTTG TERM 2871 2178915 - 2178902 - g 74 -2.3 -5.00616 | opp_overlap 2178911 GCCGCCTTTAAAAAA GAGCG CGCC CGATC CCATCGCTTTACTTC TERM 2872 2179112 - 2179096 - g 70 -8.7 -3.63843 | overlap 2179094 2179097 AATCAATGATAAAGA CGTCGAG CGT CTCGACA GAGAAAACAAACTGG TERM 2873 2179139 - 2179124 - g 72 -2.5 -4.85653 | gap 1, overlap 2179125 2179126 GACAGAGAAAACAAA CTGGCG AACTA CGCC-G CCACCCATGACATCG TERM 2874 2179875 - 2179862 - g 74 -2.3 -5.03747 | opp_overlap 2179850, overlap 2179850 AAACGCTTTAAAAAA CCGTG GTAT CAGGG CGATACGATTCCGGT pbpA 2178539 - 2180440 + | penicillin-binding protein 2 mrdB 2180443 - 2181555 + | cell wall shape-determining protein rlpA 2181566 - 2182699 + | rare lipoprotein A TERM 2875 2183046 - 2183030 - g 71 -4.4 -4.63218 | gap 1, opp_overlap 2183041, overlap 2183031 TCTGGCGGAACAAAA CGCCGAC GAAC GTCG-CG ACCCGGCTAGTCTGA dacA 2182839 - 2184050 + | D-alanyl-D-alanine carboxypeptidase fraction A TERM 2876 2184101 - 2184131 + F 100 -13.5 -5.48825 | gap 1, opp_overlap 2184106, overlap 2184106 TATACTATGCATCAG TAA-AACTCCCGCC CTGT GGCGGGAGTTGTTA TTTTTTTACGTAATG TERM 2877 2184125 - 2184106 - f 100 -15 -4.3129 | opp_overlap 2184101 2184106 TATGCATCAGTAAAA CTCCCGCC CTGT GGCGGGAG TTGTTATTTTTTTAC TERM 2878 2184106 - 2184125 + F 100 -15 -4.48073 | opp_overlap 2184106, overlap 2184101 TATGCATCAGTAAAA CTCCCGCC CTGT GGCGGGAG TTGTTATTTTTTTAC ybeD 2184158 - 2184421 + | hypothetical protein lipB 2184521 - 2185162 + | lipoyltransferase ybeF 2185464 - 2186417 + | putative DNA-binding transcriptional regulator lipA 2186623 - 2187588 + | lipoyl synthase TERM 2879 2187639 - 2187625 - T 100 -9.2 -5.81412 | opp_overlap 2187625 TTCAGGCAAAAAAAA CCGGCA ACT CGCCGG TTTTTTTACTCTGCG TERM 2880 2187625 - 2187639 + T 100 -8.5 -5.58454 | opp_overlap 2187625 TTCAGGCAAAAAAAA CCGGC AACTC GCCGG TTTTTTTACTCTGCG tatE 2187877 - 2187674 - | twin arginine translocase protein E TERM 2881 2187918 - 2187899 - R 74 -5.6 -4.72272 | gap 1, overlap 2187901 CTTCTTCACTAAAAA CAGGCTGCG TAA CGC-GCCGG ATTAACCTGAGAATA ybeM 2188794 - 2188006 - | putative hydrolase TERM 2882 2188632 - 2188606 - G 76 -10 -3.86194 | opp_overlap 2188623 AAGCCGCGTCATAAA CGCGCCATCCAG CGG CTGCGCGGCGCG AATCGGCAGGTCAAG ccrB 2188885 - 2189268 + | camphor resistance protein CrcB TERM 2883 2189297 - 2189281 - T 93 -7.2 -5.81032 | opp_overlap 2189281 TAAGCGCAAAAAAAA CCCGCC GAAAG GACGGG TTTTGAAATCTTGCT cspE 2189535 - 2189326 - | cold shock protein CspE TERM 2884 2189577 - 2189561 - R 71 -7.3 -4.02302 | overlap 2189563 TTTACATGAAAAATA GACACAA ATG CTGTGTC GGATACCAGTACAAC pagP 2190295 - 2189723 - | palmitoyl transferase for Lipid A TERM 2885 2190751 - 2190761 + G 95 -8.2 -4.99043 | CATTAAGGGATATTC CGCC ACT GGCG TTTTATTTGTCGGCG TERM 2886 2191144 - 2191166 + G 89 -13.4 -3.59262 | GGTCAACGTCGGCAT TAGCCGCGGC GCG GCGGCGGCTA TTTGCGCCTCTCCGG TERM 2887 2191710 - 2191730 + G 71 -10.5 -3.25111 | overlap 2191699 2191709 CTTCTTTTGGCTCCG CCAGCATTA TTC TGATGCTGG TCTTAGTGATTTTAA dcuC 2190674 - 2192059 + | C4-dicarboxylate transporter DcuC TERM 2888 2192069 - 2192099 + T 73 -10.3 -3.02043 | GGCTGATAGCCGGTA AGCCGGGGCGAGG GAAAA CATCGCTCCGGCA TCTTAAAGCGGGCTT dpiA 2192793 - 2192113 - | two-component response regulator DpiA citC 2194859 - 2195884 + | [citrate (pro-3S)-lyase] ligase TERM 2889 2196017 - 2196037 + G 73 -8.9 -3.91897 | TTGGCGAGGCCATTC GCGCCACCA TCC TGGAGGTGC TTTCTCGCTACGACG citD 2195881 - 2196177 + | citrate lyase subunit gamma TERM 2890 2196342 - 2196330 - g 78 -6.9 -4.63527 | opp_overlap 2196330 2196332 GCATTACGCGAAAAA GACGC GGC GCGCC GTCTGGTATATCACG citE 2196174 - 2197082 + | citrate lyase beta chain TERM 2891 2197815 - 2197801 - g 72 -2.1 -4.90778 | gap 1, overlap 2197802 2197803 GTGATGCAAACAAAA TCGGCG CTGG CGC-GA CCCGCATGACCACTA TERM 2892 2197977 - 2197966 - g 75 -5.8 -4.66537 | opp_overlap 2197969 2197970 2197972 TCCTGGAAGACAAAA TGCG TAGC CGCA ACATTGTGGCTAATT citF 2197092 - 2198621 + | citrate lyase alpha chain citX 2198757 - 2199176 + | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase TERM 2893 2199856 - 2199831 - gf 77 -11.1 -3.26947 | gap 1, opp_overlap 2199831 TAACGGCGATACCAA CGT-CGCGTCGC GCG GCGGCGCGGACG GTCTGCGCTGGCTAC TERM 2894 2199831 - 2199885 + GF 71 -7.2 -3.97307 | gap 4, opp_overlap 2199831 2199876, overlap 2199876 TAACGGCGATACCAA CGTCGCGT-C-GC-GCGG-CGGCGCGGA CGG TCTGCGCTGGCTACAGCAGCACGCGGCG TTCTTATTACATCAG citG 2199148 - 2200044 + | triphosphoribosyl-dephospho-CoA synthase TERM 2895 2200645 - 2200656 + G 71 -7.2 -4.05208 | overlap 2200643 CGATCCTTCCGCACG CCGC ATCG GCGG TTATTTGATGTGGAT TERM 2896 2201229 - 2201284 + G 100 -15 -3.81488 | overlap 2201239 ATGCAACCGTCATTG TACTGGTACTGGTACTGGTACTGGTA CTGG TACTGGTACTGGTACTGGTACTGGTA TTCTATTTCGCGCAC citT 2200082 - 2201587 + | citrate carrier TERM 2897 2201644 - 2201613 - f 80 -7.2 -4.63184 | opp_overlap 2201616, overlap 2201614 2201616 AACGTAGGTTAAAAA TGATGCCGTTCAGG TTCA CCTGAGCGGCATTT TTTATGATTAAATGA TERM 2898 2201643 - 2201614 - f 77 -10.7 -3.37188 | opp_overlap 2201616, overlap 2201613 2201616 ACGTAGGTTAAAAAT GATGCCGTTCAGG TTCA CCTGAGCGGCATT TTTTATGATTAAATG TERM 2899 2201616 - 2201641 + F 100 -15.5 -5.37345 | opp_overlap 2201614 2201613 2201616 GTAGGTTAAAAATGA TGCCGTTCAGG TTCA CCTGAGCGGCA TTTTTTATGATTAAA TERM 2900 2201641 - 2201616 - f 83 -13.3 -3.25166 | opp_overlap 2201616, overlap 2201614 2201613 GTAGGTTAAAAATGA TGCCGTTCAGG TTCA CCTGAGCGGCA TTTTTTATGATTAAA TERM 2901 2201822 - 2201833 + G 72 -3.6 -4.82901 | opp_overlap 2201830 TGTGCTGGCGCTTTC CTGG CAAA CCGG TTTTTGTCAAAGCCA rna 2201697 - 2202503 + | ribonuclease I TERM 2902 2202657 - 2202679 + F 100 -12.7 -5.07652 | opp_overlap 2202657 ATCATGAGAGTTAAA CCCTCGCCG CCAGA CGGTGAGGG TTTTCTTTTGGGACC TERM 2903 2202679 - 2202657 - f 86 -11.2 -3.72968 | opp_overlap 2202657 ATCATGAGAGTTAAA CCCTCGCCGC CAG ACGGTGAGGG TTTTCTTTTGGGACC rnk 2202738 - 2203148 + | nucleoside diphosphate kinase regulator TERM 2904 2203200 - 2203181 - f 79 -12.2 -2.87881 | opp_overlap 2203181, overlap 2203153 2203150 2203183 TAATGCGTTTACACA GAGGATGC CTGC GCATCCTC TTTCCGTTAGCTCTT TERM 2905 2203181 - 2203200 + F 93 -12.2 -3.78067 | opp_overlap 2203153 2203150 2203181 2203183 TAATGCGTTTACACA GAGGATGC CTGC GCATCCTC TTTCCGTTAGCTCTT TERM 2906 2203466 - 2203478 + F 73 -7.7 -4.14392 | opp_overlap 2203466 AGCCACGCGTGAACA TGGGT TTG ACCCA TTTTAAAAGTTAGCC TERM 2907 2203550 - 2203535 - f 84 -8.2 -4.64334 | overlap 2203545 AAGCTGTGAATAAAA CCGGCA TACA CGCCGG GCACGCTGACCACGC TERM 2908 2204092 - 2204115 + F 75 -3 -5.1356 | gap 1, opp_overlap 2204092 2204094 2204095, overlap 2204095 2204096 ATGGCTATAACCAAA CAG-CGCCGCC GGC GGCGGGATCTG TTTTTATTCATCGCC ybdQ 2204691 - 2205119 + | hypothetical protein TERM 2909 2205176 - 2205136 - T 84 -8.2 -4.56597 | opp_overlap 2205143, overlap 2205137 2205140 CCTGGTGGCTAAAAA CTGACACGCCCTGCCAGG TCACG CCTGGCAGGGCTTTTTAC TGCATCATCGTTAGT TERM 2910 2205175 - 2205137 - T 82 -11.7 -3.33744 | opp_overlap 2205143, overlap 2205136 2205140 CTGGTGGCTAAAAAC TGACACGCCCTGCCAGG TCACG CCTGGCAGGGCTTTTTA CTGCATCATCGTTAG TERM 2911 2205172 - 2205140 - T 82 -13.4 -2.83903 | opp_overlap 2205143, overlap 2205137 2205136 GTGGCTAAAAACTGA CACGCCCTGCCAGG TCACG CCTGGCAGGGCTTT TTACTGCATCATCGT TERM 2912 2205143 - 2205169 + T 100 -20.2 -4.75372 | opp_overlap 2205140 2205137 2205136 GCTAAAAACTGACAC GCCCTGCCAGGT CAC GCCTGGCAGGGC TTTTTACTGCATCAT SPA2121 2205954 - 2205187 - | molybdopterin-containing oxidoreductase membrane anchor subunit SPA2122 2206511 - 2205954 - | molybdopterin-containing oxidoreductase iron-sulfur subunit SPA2123 2208787 - 2206508 - | molybdopterin-containing oxidoreductase catalytic subunit TERM 2913 2206933 - 2206943 + g 74 -4.6 -4.83169 | overlap 2206926 TGTATTCCGGCAGCG CGGT GTG GCCG TTTTTCTCCGCCAGT TERM 2914 2207000 - 2207035 + g 100 -9.7 -5.41143 | CGGCGTTTTGAACTT GCGATCGTACCAGGC GGCAGA GCTTGGCAGGATCGC TTTTTTTGGCCCGTC TERM 2915 2207311 - 2207340 + g 73 -9.3 -3.90291 | gap 1, overlap 2207302 CAAACGCGGTGGTAA CGG-GCAGCACGAT ATC AGCGTGTTGCACCG TTTCGTTGAAGAACT TERM 2916 2208764 - 2208753 - G 80 -4.4 -5.00884 | ATCCCCTTTAAAAAA GAAC GTCT GTTC AGATGTCCCGTCTCA SPA2124 2209340 - 2208780 - | hypothetical protein TERM 2917 2209513 - 2209533 + r 93 -14.1 -3.61328 | opp_overlap 2209513 CGTTGAAATAAAAAA CCGTCTGTT ATT AACAGACGG TTTCAGAGTATTGAT TERM 2918 2209533 - 2209513 - R 100 -14.1 -5.63517 | opp_overlap 2209513 CGTTGAAATAAAAAA CCGTCTGTT ATT AACAGACGG TTTCAGAGTATTGAT ahpF 2211238 - 2209673 - | alkyl hydroperoxide reductase F52A protein (subunit F) TERM 2919 2209947 - 2209906 - G 74 -2.9 -4.8543 | gap 1, overlap 2209907 CAATCTGCACAAAAA TCCCTGCCAGC-GCGACGCT ATG AATATCGCCGCTGACACGGT CACGATACTCCAGTC TERM 2920 2211343 - 2211326 - R 95 -12.7 -4.05788 | GGTGCTGAAATGAAA TGGGCGC GGGT GCGCCCA TGACTGAAACAATTT ahpC 2212043 - 2211480 - | alkyl hydroperoxide reductase subunit C TERM 2921 2211968 - 2211990 + g 95 -10.6 -4.57569 | CTTCGGTATCTTTCT CGGTGACTTC AAT GAATTCACCG TTTTTGAACGCCTGG TERM 2922 2212154 - 2212144 - H 72 -8.2 -3.81414 | AGCGTTAACTAACAA CCCG ATT CGGG CGACATTGTGAACAC TERM 2923 2212217 - 2212199 - H 100 -16 -5.00138 | opp_overlap 2212196 CATCTAAAGTAAAAA GGCCGCCT GAC AGGCGGCC CCATTACCTGAACTA TERM 2924 2212294 - 2212274 - H 88 -12.6 -3.53224 | opp_overlap 2212263 GACTCGTCTTGCAAA TGGCAGGC GTATT GCCTGCCA CTCGAAATCCATAGC TERM 2925 2212588 - 2212571 - g 72 -4.1 -4.69027 | AAAGCCATCGAAAAA CAGGGTA TAAC TATCCTG AAATCCTTCGAGGCG dsbG 2212484 - 2213230 + | disulfide isomerase/thiol-disulfide oxidase TERM 2926 2214256 - 2214280 + G 77 -3.6 -5.00616 | gap 1, overlap 2214262 TGACTATCGCCAACT CC-ATCAGCTC CACG GAGCTTATTGG TTTTTTACCACAAAC ybdO 2213547 - 2214449 + | lysR family transcriptional regulator TERM 2927 2214491 - 2214507 + F 74 -8.1 -3.90588 | opp_overlap 2214486 2214483 2214482 TATAAATTAAGTGTA TACATTC GTA GAATGTA TTTACTTAGAGAATA TERM 2928 2214869 - 2214880 + GF 74 -2.2 -5.10461 | TGAATACTACGCGGA CGTT ATTG AGCG TTTTTATTGGGTCGC TERM 2929 2215645 - 2215629 - gf 89 -2.9 -5.55769 | TGGTATAAGAAAAAA GGCATGA ACA CCATTCC ACAGACGCAGCAGGG ybdN 2214615 - 2215850 + | hypothetical protein TERM 2930 2216238 - 2216219 - gT 71 -10 -3.19921 | overlap 2216210 AGAGAACGTCACGAA CGGATGGC GGCA ACCATCCG GCATAACCGCGCGCG TERM 2931 2216379 - 2216413 + GT 71 -10 -3.29144 | opp_overlap 2216377 2216375 2216379 2216383, overlap 2216407 TGCGCCTGAAACAGA TCAACGGACTGCAGGA ACT TTTTGCAGACCGTCGA TTCTCCAGAGCGTGG ybdM 2215823 - 2216440 + | hypothetical protein ybdL 2217601 - 2216441 - | putative aminotransferase TERM 2932 2216768 - 2216790 + g 76 -11.9 -3.01712 | opp_overlap 2216766 GGCGCGCAGCATATC CGCCAGCGC CAGTT GCGCCGGCG TATTGACGCAAAACG TERM 2933 2218553 - 2218541 - g 70 -3.4 -4.81249 | overlap 2218534 CCGCAAACGGAAAAA TTCC TGCAC GGAA CGAAAGTGGCTTATG ybdH 2217728 - 2218816 + | hypothetical protein ybdD 2219049 - 2218852 - | hypothetical protein TERM 2934 2219097 - 2219071 - R 72 -9.4 -3.6502 | opp_overlap 2219070 2219072, overlap 2219072 CACCTGTCATCCAAA CGCCCTCTCC TTATTCT GGAGAGGGCT ATTGATGAAAAAAGA TERM 2935 2219096 - 2219072 - R 82 -12.9 -2.78798 | opp_overlap 2219070 2219072, overlap 2219071 ACCTGTCATCCAAAC GCCCTCTCC TTATTCT GGAGAGGGC TATTGATGAAAAAAG TERM 2936 2219072 - 2219096 + r 83 -12.9 -3.13403 | opp_overlap 2219072 2219071, overlap 2219070 ACCTGTCATCCAAAC GCCCTCTCC TTATTCT GGAGAGGGC TATTGATGAAAAAAG cstA 2221218 - 2219113 - | carbon starvation protein A TERM 2937 2220007 - 2220035 + g 76 -11.7 -3.13522 | opp_overlap 2219994, overlap 2220006 TACGACATCCGCTGT CCCCGATGGCG CCAGTAC CGCCATCGGGC TATTCATCGCAAAGT ybdB 2221813 - 2221400 - | hypothetical protein entA 2222571 - 2221816 - | 2,3-dihydroxybenzoate-2,3-dehydrogenase TERM 2938 2222065 - 2222011 - G 70 -10.1 -3.36878 | overlap 2222012 TTCACTTACCCATAA CGTGCGCTGC-ATATCGGTGTCGGTCG AAC CGGGCGACACC-ACATTACAGCGCACC CCACAGCCCGCCAGC TERM 2939 2222064 - 2222012 - G 78 -13.6 -2.61912 | overlap 2222011 TCACTTACCCATAAC GTGCGCTGC-ATATCGGTGTCGGTCG AAC CGGGCGACACC-ACATTACAGCGCAC CCCACAGCCCGCCAG entB 2223428 - 2222571 - | isochorismatase TERM 2940 2223457 - 2223477 + r 74 -5.4 -4.72201 | overlap 2223460 TCAGAGCGGTGAACG TGACGCCA ACCGC TGGCGTAA TTGTTTTTTATCGAC entE 2225055 - 2223442 - | enterobactin synthase subunit E TERM 2941 2223842 - 2223827 - G 74 -3.2 -4.87626 | opp_overlap 2223829 CCGGAACAGTAAAAA CCGTTG GCGT CAAAGG CGCTGGCATTGTGTT TERM 2942 2224334 - 2224317 - G 74 -4.7 -4.82901 | CTTTGGCGAGAAAAA CGCCCAG CGCG CCCGGCG AACTCATGGCGTAGT entC 2226237 - 2225062 - | isochorismate synthase TERM 2943 2226910 - 2226939 + G 77 -11.4 -3.60805 | gap 1 ATCTCATTTTGATTA GCGCCACCGGCGG CGACT CCGC-GCTGGCGC TTTACGATCAGCTCT fepB 2226546 - 2227502 + | iron-enterobactin transporter periplasmic binding protein TERM 2944 2227510 - 2227558 + T 100 -17 -3.13403 | gap 1, overlap 2227511 TGTTTTAGCCTTATC GGAGTCTTATCCGACTGACCAGA CAGA TTTGGTCGGTCGGATAA-ACGCC TCTTCATCAGCCAGC TERM 2945 2227511 - 2227560 + T 77 -11 -3.14211 | gap 2, overlap 2227510 GTTTTAGCCTTATCG GAGTC--TTATCCGACTGACCAGA CAGA TTTGGTCGGTCGGATAAACGCCTC TTCATCAGCCAGCAT ybdA 2228809 - 2227565 - | enterobactin exporter EntS TERM 2946 2229270 - 2229280 + G 74 -6.8 -4.29432 | TGGTTTCTCCACGCC GCTG GAA CAGC TTTTCATGGCATTTA fepD 2228920 - 2229927 + | iron-enterobactin transporter membrane protein TERM 2947 2230142 - 2230158 + G 74 -4.3 -4.7078 | overlap 2230144 2230156 GATTGGCGCTGCGCT TGGCGTC AGT GGCGCGA TTTTTCAGTCGTTGA fepG 2229927 - 2230916 + | iron-enterobactin transporter permease TERM 2948 2231506 - 2231492 - g 75 -5.7 -4.62471 | CTCAACCGCGAAAAA GGCTA TACGC TAGCC GCCGTCCTGCACGAC fepC 2230913 - 2231707 + | iron-enterobactin transporter ATP-binding protein TERM 2949 2231747 - 2231728 - T 95 -12.2 -4.05389 | opp_overlap 2231728 CACACAGATGACAAA GCCGGATA TCGC TATCCGGC TTTTCGGGTAAATCA TERM 2950 2231728 - 2231747 + T 95 -12.2 -4.14739 | opp_overlap 2231728 CACACAGATGACAAA GCCGGATA TCGC TATCCGGC TTTTCGGGTAAATCA fepE 2232896 - 2231760 - | ferric enterobactin transport protein FepE TERM 2951 2231880 - 2231900 + g 82 -5.4 -5.08824 | opp_overlap 2231880 CGCCAGGATAATAAT GATGGCTT TACCC GGGCCATC TTTTTTCACTGGCAG TERM 2952 2232242 - 2232256 + g 83 -7.8 -4.55128 | CCATCGCCAGCTTTT CCTGCT CAT AGCGGG TTTTGATTTCCAGCT TERM 2953 2233106 - 2233080 - R 100 -11.1 -5.45652 | opp_overlap 2233080 AGTTGCAATAAAAAA CCCATAATAAT TAGTC ATTATTATGGG TTTCAGGATTTAATT TERM 2954 2233080 - 2233106 + r 82 -11.1 -3.65084 | opp_overlap 2233080 AGTTGCAATAAAAAA CCCATAATAAT TAGTC ATTATTATGGG TTTCAGGATTTAATT entF 2237030 - 2233146 - | enterobactin synthase subunit F TERM 2955 2233482 - 2233496 + g 78 -7.1 -4.57341 | CAATACGTCCGGATT GAGGC CATTC GCCTC TTTTTCCCGCCAGTT TERM 2956 2233584 - 2233551 - G 76 -10.3 -3.68936 | gap 1, opp_overlap 2233561 CAGTAATCCCAAGAA CGCCACGGTTTCGC CGTGCGC GCGCAACCG-GGCG GCGATCCCTTGCGCC TERM 2957 2234894 - 2234876 - G 75 -6.7 -4.52589 | opp_overlap 2234876, overlap 2234877 CGCCGCTACAGAAAA CGCGCTT TAAGG AAGCGCA GCTTTTCCCCGCCGA TERM 2958 2235618 - 2235628 + g 74 -2.4 -5.03715 | ATCTGCCAACGCGGA AGCC TCT GGCG TTTTTTGCGCCTGCT TERM 2959 2235668 - 2235688 + g 75 -11.1 -3.41325 | opp_overlap 2235656, overlap 2235666 AATCGCTAAGCGTGG CGGCGGGAA TCG TTACCGCCG TATTATTAAGGTGTG TERM 2960 2236397 - 2236363 - G 78 -12.1 -3.26722 | gap 2, overlap 2236361 2236364 TTCATACGCAGAATA CCCGCGCTCGCCGACCG CCC CGG-CAGCG-GCGCGGC AGAAATTGACGCCGG TERM 2961 2236396 - 2236364 - G 85 -15.6 -2.55712 | gap 2, overlap 2236363 2236361 TCATACGCAGAATAC CCGCGCTCGCCGACCG CCC CGG-CAGCG-GCGCGG CAGAAATTGACGCCG ybdZ 2237245 - 2237027 - | hypothetical protein fes 2238490 - 2237276 - | enterobactin/ferric enterobactin esterase TERM 2962 2237714 - 2237761 + g 76 -12 -3.1355 | gap 1 CAACAGTTCCTGCTG CACCGCCAGCCAGAAGTCGGCAT TGC AGGGCAACTCCTGGCTG-CGGTG TTGAGTATCAATCGC TERM 2963 2239608 - 2239594 - g 77 -7.8 -4.24963 | opp_overlap 2239596, overlap 2239602 GATAATTACGGAAAA GAGACG AAC CGCCTC TATCGGCAGAACTAC TERM 2964 2240022 - 2239992 - g 77 -8.3 -4.07568 | overlap 2239995 2240002 2240006 TCTGTTTGCTGAAAA CAACATGGAACTG ACCGA CAGCACCATGCTG ACGCCGGGGCTACGT fepA 2238679 - 2240934 + | outer membrane receptor FepA entD 2240981 - 2241685 + | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex ybdK 2241697 - 2242815 + | carboxylate-amine ligase ybdJ 2242882 - 2243130 + | hypothetical protein ramA 2243477 - 2243136 - | transcriptional activator RamA TERM 2965 2243262 - 2243294 + g 86 -9.9 -4.29845 | gap 2 AATATCATACACCTT CTGGTCGGTGTCGCG CAGGT CGCG-CGCCG-CCAG TTTTAGCTTCCGTTC TERM 2966 2243368 - 2243354 - G 74 -2.7 -4.85599 | TGTACTGCATAAAAA GGCGC TGCAG GTGCC ACTTGGAATACCCCG TERM 2967 2243724 - 2243738 + H 80 -7.2 -4.57569 | overlap 2243700 2243696 CGACGCGACAACGGG CATGAT TCA ATCATG TTTTTCCAGACATAA TERM 2968 2244204 - 2244225 + G 72 -2.1 -4.84359 | gap 1, overlap 2244205 2244206 TTTATGTCGGATGAG TACCG-CGCC TTC GGCGACGGCC TTTTTCTGGCGCTGG TERM 2969 2244258 - 2244290 + G 76 -12.1 -3.08813 | gap 1, opp_overlap 2244254 2244257 2244250 GAAACAACAATGGAT TTCGCCGCGCGCGA TCCCGC TCGCGC-TGGCGAA TATATTGCGCTGGGA SPA2154 2243766 - 2244347 + | TetR family transcriptional regulator ybdF 2244347 - 2244715 + | hypothetical protein TERM 2970 2245009 - 2244998 - g 71 -5.8 -4.25104 | GCGCGCGTAGCAAAA TCCG CTGC CGGA AACTACACGTTCAAC nfnB 2244812 - 2245465 + | dihydropteridine reductase TERM 2971 2245478 - 2245495 + T 100 -12.7 -5.1361 | TAATCCCCTGCCTAA GCCGGAC GCCC GTCCGGC TTTTTTCACCTTTCT TERM 2972 2245674 - 2245662 - T 80 -6.9 -4.56607 | opp_overlap 2245662 GGATGAAGGAGAAAA CGGCG TGA CACCG GTTTGCGCCTACGAT apeE 2247702 - 2245732 - | outer membrane esterase TERM 2973 2246041 - 2246063 + g 71 -10.6 -3.3071 | overlap 2246042 ACCCACCTGCGAATG GGCGTTTTGG TCG CCAAAACGCA TTGATGTACTGGTAT TERM 2974 2246042 - 2246062 + g 81 -14.1 -2.57944 | overlap 2246041 CCCACCTGCGAATGG GCGTTTTGG TCG CCAAAACGC ATTGATGTACTGGTA TERM 2975 2247144 - 2247164 + g 76 -12.5 -2.71731 | TTAGCGCCGGGGGCG CCGCTGCGC CCA GCCCAGCGG TGATTACCGCCTCCA TERM 2976 2247974 - 2247995 + H 71 -8 -3.85698 | TGCATAAATGTCATT CAGCAGTC ATCATA GGCTGCTG TTTATAAAGGAGAGA TERM 2977 2248876 - 2248859 - g 72 -4.1 -4.78107 | gap 1, opp_overlap 2248862, overlap 2248861 2248862 GATGATGATGAAAAA CAGCGGCT GTT AACCGC-G CAACTGTTAAAGCCG TERM 2978 2248875 - 2248861 - g 71 -7.8 -4.00443 | opp_overlap 2248862, overlap 2248859 2248862 TGATGATGAAAAACA GCGGCT GTT AACCGC GCAACTGTTAAAGCC ybdG 2248013 - 2249260 + | hypothetical protein TERM 2979 2249296 - 2249265 - T 90 -16 -2.56596 | opp_overlap 2249260, overlap 2249261 TGCGCCATTAATGGA TTGCCCGATCGCAT GAGC ATGGGATCGGGCAA AAAAGTTAATGAGCC pheP 2250696 - 2249302 - | phenylalanine transporter TERM 2980 2250398 - 2250385 - G 75 -3.7 -4.84359 | CCAGCCCGACAAAAA GCCCG CAAA CGGCC CCCAATATTTCCAGG TERM 2981 2250553 - 2250519 - G 78 -7.1 -4.66987 | gap 1, opp_overlap 2250523, overlap 2250522 CATAGCCCAACAAAA CAGCCGGCCCCGCCAT TTGA ATCGCCGGGCCGA-TG CCCAGAAACAGTCCG SPA2160 2251022 - 2252197 + | putative ATPase involved in DNA repair TERM 2982 2252252 - 2252213 - T 77 -10.9 -3.19463 | gap 2, overlap 2252217 TCCATCATTCATCAA CAC-ATT-GTCGGATGGCG CAAG CGCCACCCGACGAATCGCG GCATAAAGAGGGTAA TERM 2983 2252246 - 2252217 - T 90 -14.3 -3.13867 | overlap 2252213 TCATTCATCAACACA TTGTCGGATGGCG CAAG CGCCACCCGACGA ATCGCGGCATAAAGA ykgB 2252836 - 2252276 - | hypothetical protein SPA2162 2253085 - 2252849 - | hypothetical protein TERM 2984 2253045 - 2253035 - G 77 -8.2 -4.11216 | GGCGGAGGCGGAAAA CGCC AGC GGCG CAGCCAATAATGAAG TERM 2985 2253157 - 2253182 + r 71 -3.9 -4.85599 | overlap 2253159 AAGCCTTTTCTTTCA GACGCCAGCAT ATTT GTCCTGGCGTA TTTTTATAGCCTGAC TERM 2986 2253226 - 2253210 - R 100 -9.4 -5.45726 | opp_overlap 2253210 2253207 GACAGGCCAAAAAAA GCCCTG ATTAA CAGGGC TACGTTATTTATGTT ykgC 2254567 - 2253242 - | pyridine nucleotide-disulfide oxidoreductase TERM 2987 2253850 - 2253861 + g 74 -7.2 -4.1021 | CATCCACAAGATGCG CGCC TTCC GGCG TTTCTACTTGTACCG TERM 2988 2255400 - 2255419 + G 70 -10 -3.35224 | gap 1, overlap 2255398 ACGGGTACACATGTC GC-GGGCGA GCT TCGCCCAGC TATTTCGCGACGTGT ykgD 2254783 - 2255637 + | araC family transcriptional regulator TERM 2989 2255659 - 2255639 - T 71 -7.5 -3.96148 | opp_overlap 2255639 2255639, overlap 2255640 CGCTCGGACGATAAA CGTAGGCTG AAC CCGCCTACA GTTTGACGCCGCAGG silA 2255899 - 2255618 - | putative inner membrane proton/cation antiporter TERM 2990 2255954 - 2255964 + H 73 -2.4 -5.10163 | CTGTCACCTCCGATA CGCG CTA CTCG TTTTATTTTGACATT SPA2166 2256198 - 2256443 + | copper-binding protein TERM 2991 2256729 - 2256709 - f 87 -6.9 -5.16071 | AATCAGCAATAAAAA TTGATCGGT AAC AACGATCAA TTAACGCGCAAACAA gtrA 2256846 - 2257208 + | bactoprenol-linked glucose translocase gtrB 2257205 - 2258131 + | bactoprenol glucosyltransferase SPA2170 2260150 - 2260368 + | putative transposase TERM 2992 2260433 - 2260404 - f 82 -2.9 -5.60864 | gap 1 GACATATTAAAAAAA GCCGCAGTAGAC TCAATTG GTC-ACTGCAAC CATGAATGACAAAAG TERM 2993 2261374 - 2261345 - g 88 -13.7 -3.33696 | overlap 2261362 CGTCTGGCGAATCAA TGGCAGCAGAAAA TTGA CTTTCTGCCGCCA GAAGAGATAGATAAT fimW 2261264 - 2261860 + | fimbriae w protein TERM 2994 2262252 - 2262266 + G 71 -4.2 -4.63527 | opp_overlap 2262252 CATTGAAACATCAGA GCAACG AAG CATTGC TTTTTACGCTGGTGC SPA2174 2262025 - 2262333 + | hypothetical protein fimY 2262352 - 2263074 + | fimbriae Y protein TERM 2995 2264196 - 2264186 - g 73 -5.4 -4.67607 | opp_overlap 2264186 TGTCTAACAAAGAAA TTGC CGA GCAA CTTTTATTGAGTAAC fimZ 2263678 - 2264310 + | transcriptional regulator FimZ TERM 2996 2264340 - 2264316 - T 71 -10.8 -2.65532 | gap 1, overlap 2264312 2264313 ATTATTGTAAAGGTA CTCCCG-ACGA ATTA TCGTTCGGGAG CCACAATAACGGACA fimF 2264874 - 2264356 - | putative fimbrial protein fimH 2265891 - 2264884 - | FimH protein precursor fimD 2268518 - 2265906 - | outer membrane usher protein FimD precursor TERM 2997 2268368 - 2268358 - G 70 -6.8 -4.11295 | overlap 2268348 2268359 TCAAAGCGAGATAAA TCCG CCA CGGA CGCGGTATCCGCCGA fimC 2269241 - 2268549 - | fimbrial chaperone protein fimI 2269818 - 2269285 - | hypothetical protein TERM 2998 2269527 - 2269509 - G 70 -3 -4.82901 | overlap 2269511 CGCTGGCCAGAAAAA CATGGGGA TCT TCCGCAGG CGTAACGCCAGCAAA fimA 2270450 - 2269893 - | type-1 fimbrial protein, a chain precursor TERM 2999 2270177 - 2270161 - G 74 -7.9 -4.08706 | opp_overlap 2270165 2270173, overlap 2270165 GCCTGACCAGAGAAA GCCACGG CAG CGGTGGC TGCCACTTTCGGATC TERM 3000 2271820 - 2271806 - g 70 -7.1 -4.18494 | opp_overlap 2271808 2271811 CACGCTTATCGAAAA CACGC TGCAG GCGTG CATTGAATATCACGA folD 2270985 - 2271851 + | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase ybcJ 2271853 - 2272065 + | hypothetical protein TERM 3001 2272106 - 2272072 - f 70 -10.1 -2.98823 | gap 2, opp_overlap 2272073 2272084 GTGGCCTGATACAGA GTGCCGGATAGCGACGC AAA GCGTCT-TATCCGGC-C TGATTACGCTGTCTT TERM 3002 2272073 - 2272106 + F 78 -12.5 -2.75307 | gap 1, opp_overlap 2272072, overlap 2272084 TGGCCTGATACAGAG TGCCGGATAGCGACGC AAA GCGTC-TTATCCGGCC TGATTACGCTGTCTT TERM 3003 2272084 - 2272096 + F 70 -9.1 -3.30619 | opp_overlap 2272072, overlap 2272073 AGAGTGCCGGATAGC GACGC AAA GCGTC TTATCCGGCCTGATT ybcI 2272193 - 2272741 + | hypothetical protein TERM 3004 2272812 - 2272800 - T 70 -9.1 -3.30243 | opp_overlap 2272800 2272783 2272782 AGGTAGGCCGGATAA GACGC CCT GCGTC TTATCCGGCAATACG cysS 2274217 - 2272832 - | cysteinyl-tRNA synthetase TERM 3005 2274633 - 2274623 - g 73 -5.4 -4.58283 | CAATGGTCTGAAAAA TACC CGT GGTA CGCTGGCGATGGCGC ppiB 2274390 - 2274884 + | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 3006 2274924 - 2274957 + G 100 -11.1 -5.03314 | gap 1, opp_overlap 2274932, overlap 2274924 2274932 ACTTGCATCTGCAAA CGGA-AGAACCGGCGA TCG TCGCCGGTTTTCTGCG TTTTTTAGCCGTAGA TERM 3007 2274924 - 2274955 + G 83 -14.6 -2.76422 | gap 1, opp_overlap 2274932, overlap 2274924 2274932 ACTTGCATCTGCAAA CGGAAGAACCGGCGA TCG TCGCCGGTT-TTCTG CGTTTTTTAGCCGTA TERM 3008 2274932 - 2274948 + G 100 -13.7 -4.58242 | opp_overlap 2274932, overlap 2274924 2274924 CTGCAAACGGAAGAA CCGGCGA TCG TCGCCGG TTTTCTGCGTTTTTT TERM 3009 2274948 - 2274932 - g 93 -13.7 -3.77832 | opp_overlap 2274924 2274924 2274932 CTGCAAACGGAAGAA CCGGCGA TCG TCGCCGG TTTTCTGCGTTTTTT TERM 3010 2275455 - 2275442 - g 74 -4.5 -4.81249 | overlap 2275444 GCCGAAATGGAAAAA CACCG CGTA CAGTG GCTGATTCACGGTCA ybbF 2274887 - 2275609 + | UDP-2,3-diacylglucosamine hydrolase purE 2275727 - 2276236 + | phosphoribosylaminoimidazole carboxylase catalytic subunit TERM 3011 2276502 - 2276485 - g 72 -2 -4.96848 | CGTCTGACACAAAAA CAGCTT TTCGAT AAACTG GGACTCGCGACCGCG purK 2276233 - 2277300 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 3012 2277339 - 2277302 - T 75 -6.3 -4.46233 | gap 3, opp_overlap 2277304, overlap 2277304 GTAAGCTTAAATAAA CAGCG-TGGGCGGCG-CA TTCTC TGTCGCCGCCCGTCGC-G ATCACAGACAGATGC TERM 3013 2277338 - 2277304 - T 79 -10 -3.8323 | gap 2, opp_overlap 2277304, overlap 2277302 AAGCTTAAATAAACA GCG-TGGGCGGCG-CA TTCTC TGTCGCCGCCCGTCGC GATCACAGACAGATG arcC 2278234 - 2277341 - | carbamate kinase TERM 3014 2277833 - 2277819 - G 70 -10 -3.36505 | opp_overlap 2277818 2277819 ATATGCCAGCCATAA GTCGCT TCC AGCGAC ATTTGCTCTTCTGGC ylbF 2279047 - 2278238 - | hypothetical protein ylbE 2280318 - 2279059 - | hypothetical protein TERM 3015 2281132 - 2281096 - H 70 -10.1 -2.94144 | overlap 2281093 2281098 CGTCGAGGCAAACCA GACGTTTTCCTCACGCG CAA CGGGAGAGGAAAACCCC AAGAACAGCGCTACA TERM 3016 2281223 - 2281235 + H 76 -9.1 -3.73042 | opp_overlap 2281222 2281223, overlap 2281222 GGTTTGGAGACAAAG GCCAG CAC CTGGC TCTTTTCATCCGCGC allD 2282217 - 2283266 + | ureidoglycolate dehydrogenase allC 2283288 - 2284523 + | allantoate amidohydrolase ylbA 2284534 - 2285319 + | hypothetical protein TERM 3017 2285368 - 2285387 + T 100 -13.6 -5.71983 | GCTATGTTGGATTTT GCCACGGT GAGA ACCGTGGC TTTTTTTATACTTAA glxK 2286547 - 2285399 - | glycerate kinase II ybbY 2287868 - 2286570 - | putative purine permease YbbY TERM 3018 2287700 - 2287686 - G 83 -10 -4.08767 | GCGATGGCCGCAAAA TGCCTG AAC CAGGCA GGCCAACGCGGTGGT TERM 3019 2287911 - 2287891 - R 100 -16.9 -3.83378 | opp_overlap 2287891, overlap 2287884 CCTTAAAATAGAGAA TGCCCGTCG TGA CGACGGGCA TTAAATCACACCGGA TERM 3020 2287891 - 2287911 + r 100 -16.9 -3.05384 | opp_overlap 2287891 2287884 CCTTAAAATAGAGAA TGCCCGTCG TGA CGACGGGCA TTAAATCACACCGGA allB 2289288 - 2287927 - | allantoinase TERM 3021 2288201 - 2288178 - G 70 -3 -4.8048 | opp_overlap 2288181 2288182, overlap 2288181 GTTTCAGACCAAAAA TATCGGCGGC GTTG GTCGCCATTA ATTTGCCAAACATCG TERM 3022 2288673 - 2288685 + g 73 -9.1 -3.85389 | AATCATGCGCCGTTA CGCGA CCT TCGCG TTTAGCTTCTTCGCC TERM 3023 2288930 - 2288915 - G 71 -6 -4.24422 | TTATAAGAAACCAAA CCGCCC AACT GCGCGG CGTCGATAGTCAATT TERM 3024 2289185 - 2289200 + g 75 -6.1 -4.58395 | GCTTCCCCCAGGTTT TCGCC AATCGC GGCGA TTTTTCCGCCCTGGA TERM 3025 2290927 - 2290943 + r 72 -2.9 -5.01422 | overlap 2290927 TATTTTTAAGCTGAA GCAATAC GTT GCGTTGC TTTCTTTTTATATAA SPA2202 2292164 - 2290917 - | metabolite transport protein TERM 3026 2292224 - 2292199 - R 78 -11.9 -3.01712 | opp_overlap 2292198 TGTTCCTTGTGAACA GGTATCGCTGC AGCC GCAGCGATACA CATAATTAGGACAAT SPA2203 2293108 - 2292230 - | 2-hydroxy-3-oxopropionate reductase-like protein TERM 3027 2292625 - 2292644 + g 74 -2 -5.0133 | overlap 2292627 2292628 TTTGCCCATCCCCAT TGCCGCCC ACCA GGGTGATA TTTTTTCCCAGGATG hyi 2293984 - 2293208 - | hydroxypyruvate isomerase gcl 2295778 - 2293997 - | glyoxylate carboligase TERM 3028 2295857 - 2295836 - R 100 -10.1 -5.16472 | overlap 2295837 AAAAATTTTAAAAAA GTCCCGCTC CAGC GAGCGGGAT GCGGCTCAGGCTACA TERM 3029 2295856 - 2295837 - R 100 -13.6 -3.67443 | overlap 2295836 AAAATTTTAAAAAAG TCCCGCTC CAGC GAGCGGGA TGCGGCTCAGGCTAC allR 2296681 - 2295863 - | DNA-binding transcriptional repressor AllR TERM 3030 2296735 - 2296721 - R 71 -7.2 -4.12254 | opp_overlap 2296719 2296721 TATGAGCATAAACAA TGAACA ATA TGTTCA TCTTATGCAAGAAGG allA 2297242 - 2296760 - | ureidoglycolate hydrolase TERM 3031 2298251 - 2298227 - g 74 -2.8 -4.87665 | overlap 2298232 GCTGATCGACAAAAA CGAACTGGTA AGCTG TACCATCCCG ACGATGCGTCCGCCC ybbS 2297469 - 2298395 + | DNA-binding transcriptional activator AllS TERM 3032 2298501 - 2298483 - g 76 -3 -5.09685 | CAAGACAGACAAAAA GCACAGGA CTA TCGCGCGC TCCTCCTTGCCGATA TERM 3033 2299520 - 2299497 - g 100 -11 -5.27923 | CAACTGGAGAAAAAA GCCGCGAATA TCGT TTTTCGCGGC ACATGGCAAGACGTT ybbB 2298465 - 2299559 + | tRNA 2-selenouridine synthase sfbC 2300257 - 2299598 - | ABC transporter integral membrane protein TERM 3034 2299953 - 2299999 + g 75 -12.1 -2.9155 | opp_overlap 2299955 2299957, overlap 2299948 ACCAGGCGTGCATAA AACGCGATTGCGGCCACCGAC AGCGG GACGGAGGCCGCAATCGGGCC TATCGTATTGCCCAG TERM 3035 2299997 - 2299955 - G 100 -19.1 -4.3739 | opp_overlap 2299953 2299948, overlap 2299957 CAGGCGTGCATAAAA CGCGATTGCGGCCACCGAC AGCGG GACGGAGGCCGCAATCGGG CCTATCGTATTGCCC TERM 3036 2299995 - 2299957 - G 100 -20.3 -2.52946 | opp_overlap 2299953 2299948, overlap 2299955 GGCGTGCATAAAACG CGATTGCGGCCACCGAC AGCGG GACGGAGGCCGCAATCG GGCCTATCGTATTGC TERM 3037 2300128 - 2300112 - G 82 -5.1 -5.06016 | overlap 2300114 ACGAGATAAATAAAA CGGTTCT GCC AGAACAG ATGACGATCGGTGAC TERM 3038 2300160 - 2300149 - G 72 -2.2 -4.83615 | overlap 2300157 GATCGGTGACAAAAA TCAG AAAA CCGA GCGGTAGACCGCCAA TERM 3039 2300176 - 2300157 - G 70 -3.4 -4.73912 | overlap 2300149 2300161 ACAAAAATCAGAAAA CCGAGCGG TAGA CCGCCAAG AATCGCCAGCACCGT sfbB 2301266 - 2300250 - | ABC transporter ATP-binding protein TERM 3040 2300296 - 2300322 + g 71 -10.2 -3.29043 | gap 1, overlap 2300303 CGTTGACGGATATGC TCCA-CGGCGG CGGCCA CCGCCGTTGGA TTATGCGGCGCGGTT TERM 3041 2300303 - 2300317 + g 83 -12.8 -3.23274 | overlap 2300296 GGATATGCTCCACGG CGGCGG CCA CCGCCG TTGGATTATGCGGCG TERM 3042 2301183 - 2301167 - G 81 -6.5 -4.6902 | overlap 2301169 CGACAATGCCAAAAA TCTCGCC CGC GGCGATA TGCAGACTCACATTA sfbA 2302133 - 2301303 - | lipoprotein TERM 3043 2301436 - 2301454 + g 71 -7.4 -3.95535 | overlap 2301435 GGCTTATCGGCATCT TCACTGCG TAC CGCAATGA TATTTTTCAGGTTCT SPA2213 2303523 - 2302390 - | outer membrane protein TERM 3044 2303692 - 2303663 - R 85 -6.3 -5.14563 | opp_overlap 2303663 2303664, overlap 2303664 2303666 TGTGCGACTAAAAAA GTACGCGCCGTTT TAAA AACCGGCGCGAAA TTATTCACATAATGA TERM 3045 2303691 - 2303664 - R 79 -9.8 -3.68256 | opp_overlap 2303664 2303663, overlap 2303663 2303666 GTGCGACTAAAAAAG TACGCGCCGTTT TAAA AACCGGCGCGAA ATTATTCACATAATG TERM 3046 2303689 - 2303666 - R 85 -12.4 -3.41701 | opp_overlap 2303664 2303663, overlap 2303664 2303663 GCGACTAAAAAAGTA CGCGCCGTTT TAAA AACCGGCGCG AAATTATTCACATAA ybbP 2306123 - 2303709 - | hypothetical protein TERM 3047 2305404 - 2305388 - G 70 -8.7 -3.64049 | overlap 2305381 2305380 2305400 TTAATAACGCCGAAA GCAGCAA AAA CTGCTGC GAACGTTCGAGCGAT ybbA 2306806 - 2306120 - | putative ABC transporter ATP-binding protein YbbA tesA 2306777 - 2307391 + | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 3048 2307638 - 2307615 - g 70 -8.8 -3.75153 | GCGCTTGAACTTAAA CGCCAGGGCT TTCA AATCCTGGCG GGCTGCCGCAAACCT ybbO 2307546 - 2308316 + | short chain dehydrogenase ybbN 2308376 - 2309230 + | thioredoxin-like protein ybbM 2310095 - 2309316 - | hypothetical protein ybbL 2310759 - 2310082 - | putative ABC transporter ATP-binding protein YbbL ybbJ 2311640 - 2312092 + | hypothetical protein cueR 2312509 - 2312093 - | DNA-binding transcriptional regulator CueR TERM 3049 2312469 - 2312481 + g 95 -5.5 -5.40474 | AACCGAATGGCTTTG CTGGT TAA ACCGG TTTTTTTCGCCACAT TERM 3050 2313095 - 2313084 - g 83 -7.2 -4.57073 | overlap 2313086 CAGGCGGTGGAAAAA GCCG GCTA CGGC GCAGAAGCGATTGAA TERM 3051 2313651 - 2313619 - g 80 -4.8 -5.04987 | gap 2, overlap 2313620 AAGACGGCGAAAAAA GCGTCCCGCTGGCGGA CGT TCAGCC-G-GGGATGC TGCTGCGGCTCACTA TERM 3052 2313797 - 2313762 - g 74 -4.5 -4.7254 | opp_overlap 2313788, overlap 2313764 ATTCCGCAGCAAAAA GGCGAAGGCGACAGC GTTCAT GCCGGCACCGTCGTC CAGGACGGCAGCGTC ybaR 2312619 - 2315120 + | copper exporting ATPase TERM 3053 2315159 - 2315124 - f 93 -9.8 -4.70879 | opp_overlap 2315115 2315127, overlap 2315115 2315125 2315126 CCGAAAGCGTAAAAA CGCTATATCAGGCAGC ATCA GCTGCCTGATATATTA TTAAGCCATCAGTAA TERM 3054 2315158 - 2315125 - f 79 -11.1 -3.41804 | opp_overlap 2315115 2315127, overlap 2315115 2315124 2315126 CGAAAGCGTAAAAAC GCTATATCAGGCAGC ATCA GCTGCCTGATATATT ATTAAGCCATCAGTA TERM 3055 2315157 - 2315126 - f 86 -14.6 -2.6436 | opp_overlap 2315127, overlap 2315125 2315124 GAAAGCGTAAAAACG CTATATCAGGCAGC ATCA GCTGCCTGATATAT TATTAAGCCATCAGT TERM 3056 2315127 - 2315156 + F 100 -18.1 -3.62597 | opp_overlap 2315126 2315125 2315124 AAAGCGTAAAAACGC TATATCAGGCAGC ATCA GCTGCCTGATATA TTATTAAGCCATCAG TERM 3057 2315244 - 2315233 - f 72 -3 -4.97159 | opp_overlap 2315233 AAAAATAAAAAACAA CATT TTAT AATG TTTTTTTGAATCATA TERM 3058 2315233 - 2315244 + F 82 -3 -5.48825 | opp_overlap 2315233 AAAAATAAAAAACAA CATT TTAT AATG TTTTTTTGAATCATA SPA2225 2315274 - 2316053 + | hypothetical protein TERM 3059 2316128 - 2316142 + F 95 -12.8 -4.36914 | opp_overlap 2316102 GTTGACGTCCCGTCA GGGCGC ATT GCGCCC TTTTCTCCAACGCGC TERM 3060 2316385 - 2316358 - g 76 -2.7 -5.01732 | gap 2, opp_overlap 2316363, overlap 2316361 AAGCTGGTGAAAAAA CTACG-CCAG-GC CGAC GCGCTGGTCGTTG AAGCGGATATTTCTG ybaP 2316187 - 2316981 + | hypothetical protein TERM 3061 2317008 - 2316987 - f 100 -7.3 -5.96894 | overlap 2316988 ATTGAAATAAAAAAA TGGCCAATA TCGC TATTGGCCC GTCAAAGAGGAATTT TERM 3062 2317007 - 2316988 - f 87 -10.8 -4.15696 | overlap 2316987 TTGAAATAAAAAAAT GGCCAATA TCGC TATTGGCC CGTCAAAGAGGAATT TERM 3063 2317447 - 2317431 - g 75 -5.8 -4.56597 | opp_overlap 2317445 TCTGGGCGCGAAAAA GGTCGA TATGG CCGACC CGATGGTGGCGCAAC ybaK 2317183 - 2317662 + | hypothetical protein ushA 2319431 - 2317779 - | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 3064 2318059 - 2318069 + g 71 -8.2 -3.89956 | AACTGTGGATAGGCG CCGG AGT CCGG TTTCATCTGTGCTAC TERM 3065 2318251 - 2318233 - G 70 -6.7 -4.15565 | gap 1, overlap 2318209 CTCATCACGCCAAAA TCG-GCGC CGGT GCGCGCGA TCTGCGCAGCCAGAA TERM 3066 2320252 - 2320242 - g 74 -6.8 -4.30448 | AAAGGCAAGCCAAAA GCGA TAA TCGC TAACCCGCTGCCGCG TERM 3067 2320505 - 2320517 + G 76 -10.5 -3.75845 | TTGGGGCTCTATTCT CGGCG TCG CGCCG TTTACCCTTGTTTTA fsr 2319603 - 2320823 + | fosmidomycin resistance protein TERM 3068 2320830 - 2320856 + F 93 -15.3 -2.99471 | opp_overlap 2320809 2320819 2320818 AAAGCGTGATTTTAT GGCGGTTAAAG GTACG CTTTAACCGCC TGTATATCCCGATGC TERM 3069 2321297 - 2321353 + G 71 -10 -3.56092 | gap 1, overlap 2321298 TGGCGGTAAAGTCTA TCGCCATTCCCGGCGCTGTCGCT-CAG ATAG CGGTGGCGACGCTGCTGGGTATGGCGC TTTCCGCCGTGCTGG TERM 3070 2321298 - 2321352 + G 79 -13.5 -2.73441 | gap 1, overlap 2321297 GGCGGTAAAGTCTAT CGCCATTCCCGGCGCTGTCGCT-CAG ATAG CGGTGGCGACGCTGCTGGGTATGGCG CTTTCCGCCGTGCTG TERM 3071 2321586 - 2321569 - g 73 -5.5 -4.58395 | GGCATGGTGGAAAAA GGCGATG TCGG CATAGCC TCGCTGGCAGTCGAT TERM 3072 2321869 - 2321889 + G 89 -3.1 -5.65927 | opp_overlap 2321858, overlap 2321867 2321872 GATACGTTGCCACTG CGCGACGCC TTT GCCGTCCTG TTTTTTGTTTCCGTC ybaL 2321038 - 2322714 + | putative cation:proton antiport protein gsk 2324067 - 2322763 - | inosine-guanosine kinase TERM 3073 2324165 - 2324183 + H 70 -2.3 -5.07053 | ATCGGACGACGAGAT CGCAGTT TCTCC AGCCGCG TTTTTTACAATGGTT aes 2324220 - 2325191 + | acetyl esterase hemH 2326150 - 2325188 - | ferrochelatase TERM 3074 2325220 - 2325265 + g 74 -2.5 -5.00616 | opp_overlap 2325226 2325229, overlap 2325235 TGAGTTTCAGCATCA TATCAATATGTTCCGGCGTCG CGTT CAGCGCCGGAATGTACGCATA TTTTTTACCGCCCAC TERM 3075 2326319 - 2326361 + r 100 -17.9 -3.05384 | TTGCCTGATGGCGCT ACGCTTATCAGGCCTGC GGGATAATG GCAGGCCTGATAAGCGG TTCACTACGCGAAAA adk 2327024 - 2326380 - | adenylate kinase TERM 3076 2327195 - 2327167 - R 84 -5.2 -5.31877 | gap 1, opp_overlap 2327167 2327184, overlap 2327153 2327168 AGGCATTATAAAAAA TGCCGGAT-GGCG CTGG CGCTTATCCGGCC TACAAACAGTACTCG TERM 3077 2327194 - 2327168 - R 72 -8.7 -3.78042 | gap 1, opp_overlap 2327167 2327184, overlap 2327153 2327167 GGCATTATAAAAAAT GCCGGAT-GGCG CTGG CGCTTATCCGGC CTACAAACAGTACTC TERM 3078 2327184 - 2327228 + r 73 -11.5 -2.73364 | opp_overlap 2327168 2327167 2327207 2327227 CCGGATGGCGCTGGC GCTTATCCGGCCTACAAAC AGTACTC GTCCGTAGGCCGGATAAGA TGCTTCGCGTCGCCA TERM 3079 2327297 - 2327285 - R 70 -9.1 -3.30124 | overlap 2327288 CCGTAGGCCGGATAA GACGC TTC GCGTC GCCATCCGGCAGTCA TERM 3080 2327528 - 2327516 - R 70 -9.1 -3.30124 | overlap 2327519 CCGTAGGCCGGATAA GACGC TTC GCGTC GCCATCCGGCAGTCA htpG 2329569 - 2327671 - | heat shock protein 90 TERM 3081 2327955 - 2327971 + g 80 -12.3 -3.35046 | opp_overlap 2327954 2327955, overlap 2327953 GCGTGTCGGTTAAAC GGTGCGT CAG ACGCACC TCTTTCACGCGATCG TERM 3082 2327971 - 2327955 - G 72 -12.3 -2.71712 | opp_overlap 2327955 2327953, overlap 2327954 GCGTGTCGGTTAAAC GGTGCGT CAG ACGCACC TCTTTCACGCGATCG TERM 3083 2329627 - 2329650 + r 100 -13.8 -4.1552 | GGGTGTGATTTCAAG CGGAGGCCGC GAAT GCCGCCTCCG TTTGTTCAGAAAATA recR 2330261 - 2329656 - | recombination protein RecR TERM 3084 2329841 - 2329852 + g 85 -4.4 -5.24129 | GGTTGGTCGCGAGGA TCAG CTCA CTGA TTTTTTCTGACGCCA ybaB 2330590 - 2330261 - | hypothetical protein TERM 3085 2330517 - 2330529 + g 89 -3.4 -5.65177 | TGCGCAATCTCTTCC TGCA TTTTC TGCA TTTTTTTCTGCATCT TERM 3086 2330635 - 2330617 - R 73 -9.6 -3.30124 | CTTGATGGTTCACAA TCGCAAGC CGG GCTTACGA TCAAATGGGGCGGAT dnaX 2332564 - 2330636 - | DNA polymerase III subunits gamma and tau TERM 3087 2330720 - 2330737 + g 74 -6.9 -4.24075 | opp_overlap 2330720 ATCCGCGATAATTGA CTCACGC GCTT GCGCGAG TTTCTCTTCATAAAT TERM 3088 2331038 - 2331051 + g 90 -5.2 -5.1861 | overlap 2331036 CGCCGCCAGTTTAGC CGCC AGCTCC GGCG TTTTTTCATGCTCCA TERM 3089 2331244 - 2331271 + g 75 -11.2 -3.37016 | gap 1, opp_overlap 2331215, overlap 2331239 GCGCAGAGTTATTCA CCGGCCGCGCGCG GGA TGCG-GCTGCCGG TTCACTCTTTTTTGT TERM 3090 2332617 - 2332641 + r 88 -14.3 -3.0094 | opp_overlap 2332617 2332620, overlap 2332620 AGGGTAATGCTAACA CAACCTCGCCG ATA CAGCGAGGTTG TCTCTCTGGCTAAAA TERM 3091 2332641 - 2332617 - R 100 -16.5 -3.09671 | opp_overlap 2332617 2332620, overlap 2332620 AGGGTAATGCTAACA CAACCTCGCCG ATA CAGCGAGGTTG TCTCTCTGGCTAAAA TERM 3092 2332620 - 2332638 + r 79 -10.2 -3.64912 | opp_overlap 2332617 2332620, overlap 2332617 GTAATGCTAACACAA CCTCGCCG ATA CAGCGAGG TTGTCTCTCTGGCTA TERM 3093 2332638 - 2332620 - R 93 -12.4 -3.69069 | opp_overlap 2332620 2332617, overlap 2332617 GTAATGCTAACACAA CCTCGCCG ATA CAGCGAGG TTGTCTCTCTGGCTA apt 2333229 - 2332678 - | adenine phosphoribosyltransferase TERM 3094 2333377 - 2333388 + r 71 -3.6 -4.89562 | GCAACAGCGATTCGT GTGC TTCA GCGC TTTTGTTGCTTTTCA ybaN 2333759 - 2333382 - | hypothetical protein priC 2333828 - 2334355 + | primosomal replication protein N'' ybaM 2334369 - 2334536 + | hypothetical protein TERM 3095 2335283 - 2335265 - g 71 -8 -3.8901 | opp_overlap 2335264 GTTGAAAGCAGGAAA CGCCGCAG AAC CCGGGGCG CTAATTCGTCAACTG SPA2243 2334606 - 2335529 + | hypothetical protein aefA 2338933 - 2335571 - | potassium efflux protein KefA TERM 3096 2337102 - 2337090 - G 84 -9.1 -4.34402 | opp_overlap 2337090 2337091, overlap 2337092 GCCGGCATACCAAAA TGGCG TAT CGCCA CGCCCTCTTTTTCCA TERM 3097 2337563 - 2337550 - G 74 -2.4 -5.08824 | opp_overlap 2337558 TGTTCACCCAAAAAA TCTG CTGCGT CAGA ATGGCTTTCAGATTT TERM 3098 2337632 - 2337649 + g 70 -5.5 -4.47183 | GTTAATCGCCATCAT CAGCTGG TTAC CCAACTG TTTATTTAGCTGATC TERM 3099 2338117 - 2338131 + g 90 -5.6 -5.15969 | opp_overlap 2338117 2338118, overlap 2338118 TTTCGTCCGGCGAAA TGGCCT CCT GGGCCG TTTTTTCCGTTAGCG TERM 3100 2338658 - 2338671 + g 70 -6.7 -4.07678 | CTGCGCCACCTTCTG CCGTA GCTG TACGG TTTCCTCTTTTACCC TERM 3101 2339046 - 2339026 - R 72 -4.8 -4.61868 | gap 1, opp_overlap 2339026 2339027 2339028, overlap 2339027 2339028 TAGCGACACAGAAAA TGTCCAGGA GTTT TCCTGGA-A TATTATCAGGGGGAG acrR 2339705 - 2339052 - | DNA-binding transcriptional repressor AcrR TERM 3102 2339115 - 2339135 + g 70 -3.1 -4.8236 | overlap 2339117 ATACATCTCCAGCAG GATCGTGAC GTA GGCGCGAGC TTCTTTTTTTAAATC TERM 3103 2339876 - 2339858 - g 90 -6 -5.17744 | opp_overlap 2339868 ACATATGAACAAAAA CAGAGG GTTAACG CCTCTG GCGGTCGTTCTGATG acrA 2339847 - 2341040 + | acriflavin resistance protein A precursor TERM 3104 2341189 - 2341150 - g 85 -13 -3.57144 | overlap 2341151 CTCGCGATCTTCAAA TTGCCGGTAGCGCAAT ATCCGACG ATTGCGCTACCAGCAG TGACGATCTCCGCAA TERM 3105 2341188 - 2341151 - g 90 -16.5 -2.74144 | overlap 2341150 TCGCGATCTTCAAAT TGCCGGTAGCGCAAT ATCCGACG ATTGCGCTACCAGCA GTGACGATCTCCGCA TERM 3106 2343282 - 2343268 - g 76 -5.6 -4.77438 | opp_overlap 2343267 ATCGACCAGGAAAAA GCTCAG GCG CTGGGC GTGTCTATTAGCGAC acrB 2341063 - 2344212 + | acriflavin resistance protein B TERM 3107 2344231 - 2344246 + F 100 -11.8 -5.00616 | opp_overlap 2344231 GCTCACTGTTGATAA GGCCGC GCAA GCGGCC TTTTTTACACAAAAA TERM 3108 2344246 - 2344231 - f 82 -11.8 -3.30124 | opp_overlap 2344231 GCTCACTGTTGATAA GGCCGC GCAA GCGGCC TTTTTTACACAAAAA ybaJ 2344708 - 2345082 + | hypothetical protein hha 2345110 - 2345328 + | hemolysin expression-modulating protein TERM 3109 2345562 - 2345529 - g 100 -3.8 -5.95286 | overlap 2345532 ACGAAAAACAAAAAA TGATCGCTGGGGCA CTGTAT TGCCCGACCGATGA AACTTTATGCCAGGA maA 2345507 - 2346058 + | maltose O-acetyltransferase ylaC 2346174 - 2346644 + | hypothetical protein TERM 3110 2346675 - 2346652 - T 100 -10.3 -5.4505 | opp_overlap 2346652 GCCGGTAATAAAAAA GTGCGCACC CTCCCT GGTACGCAC TGCTTTCCCTGAACC rpmJ 2346840 - 2346700 - | 50S ribosomal protein L36 rpmE2 2347106 - 2346846 - | 50S ribosomal protein L31 type B TERM 3111 2348277 - 2348288 + G 74 -3 -4.84359 | opp_overlap 2348260 CGGACGGCACCTTCC TTTC GCCG GAAA TTTTTATCGCGCTGG TERM 3112 2348338 - 2348313 - g 80 -8.9 -4.15044 | CGCTGGCTGAACAAA CCGGGCTCACG GAGC CGCTAACCCGG CTAATCATCGAAACC ylaB 2347331 - 2348881 + | hypothetical protein ybaZ 2349112 - 2349501 + | putative methylated-DNA methyltransferase TERM 3113 2349522 - 2349502 - Tf 100 -16.9 -3.14132 | opp_overlap 2349492 2349491 CGCTGGGTGTATTAA CCCTCTCCG TAA CGGAGAGGG TTGGCGCAGGATTAA ybaY 2350103 - 2349534 - | lipoprotein TERM 3114 2350347 - 2350324 - gR 85 -4.4 -5.27779 | overlap 2350327 2350328 TTGAACATCAAAAAA CCATGCCGAC GGCA GTCGGGCCGG AAGGACTACCGTCAG tesB 2350089 - 2350826 + | acyl-CoA thioesterase II TERM 3115 2350849 - 2350831 - TR 83 -4.4 -5.33848 | opp_overlap 2350833 2350834 2350841, overlap 2350833 2350834 ATCACAATTAAAAAA CATGCCGC TAT GCGGCGTT AATGGCCTGATGACG TERM 3116 2350847 - 2350833 - TR 74 -7 -4.29187 | opp_overlap 2350833 2350834 2350841, overlap 2350831 2350834 CACAATTAAAAAACA TGCCGC TAT GCGGCG TTAATGGCCTGATGA TERM 3117 2350846 - 2350834 - TR 74 -10.5 -3.15885 | opp_overlap 2350833 2350834 2350841, overlap 2350833 2350831 ACAATTAAAAAACAT GCCGC TAT GCGGC GTTAATGGCCTGATG TERM 3118 2350834 - 2350846 + Tr 70 -10.5 -2.50113 | opp_overlap 2350834 2350833 2350831, overlap 2350833 2350841 ACAATTAAAAAACAT GCCGC TAT GCGGC GTTAATGGCCTGATG amtB 2352212 - 2350926 - | ammonium transporter glnK 2352582 - 2352244 - | nitrogen regulatory protein P-II 2 TERM 3119 2352760 - 2352744 - R 89 -6.5 -5.30616 | overlap 2352745 GCAGGGAAAGAAAAA CGCACCA CGA CGGTGCA TAATGGGCGAGGTTT mdlB 2354576 - 2352795 - | putative multidrug transporter membrane\ATP-binding components TERM 3120 2354419 - 2354404 - G 70 -9 -3.66178 | opp_overlap 2354404 2354402 TTGCCCAACGGTAAA TGGTGG CGGG CCACCA TGTTATCAATGAAAT mdlA 2356341 - 2354569 - | putative multidrug transporter membrane\ATP-binding components TERM 3121 2355104 - 2355085 - G 90 -5.7 -5.18726 | gap 1, overlap 2355086 GTCCGAGAACAAAAA CGG-CGTC TGGCT GACGACCG CCAGTCGGCTACGCC TERM 3122 2355631 - 2355614 - G 74 -6.9 -4.25283 | opp_overlap 2355624 2355627, overlap 2355615 2355626 ATGGTTGGATCAAAA CGCGCGT CAAT ACGCGCC ACGCGCATATTTTTC TERM 3123 2355624 - 2355640 + g 86 -6.5 -5.07486 | opp_overlap 2355615 2355614 2355626, overlap 2355627 CAAAACGCGCGTCAA TACGCGC CAC GCGCATA TTTTTCTTGCCGGTA ybaO 2356840 - 2356382 - | transcriptional regulator TERM 3124 2357307 - 2357280 - g 74 -7.9 -4.13767 | GCCTGTACCGCAAAA CGTAAAATCGA GCAGAT TCAATTTTACG GCGGCCACTGTCATT SPA2264 2356953 - 2358008 + | putative lyase TERM 3125 2358022 - 2358040 + T 74 -10.3 -3.14344 | opp_overlap 2358022 AAAAACCAAAAAAAA GCCAGAC TGAAT GTCTGGC TTGCTGGAAGAGCTC TERM 3126 2358040 - 2358022 - T 100 -10.3 -6.11019 | opp_overlap 2358022 AAAAACCAAAAAAAA GCCAGAC TGAAT GTCTGGC TTGCTGGAAGAGCTC cof 2358876 - 2358058 - | hypothetical protein TERM 3127 2358968 - 2358958 - H 74 -5.4 -4.68545 | AGTGAACAGATAAAA GGAA GTG TTCC GGGTTTCTATGAGGC TERM 3128 2359415 - 2359427 + G 76 -3.3 -5.055 | CGCGCGGAACAGCAT CTCGC AGG GCAAG TTTTTTCCGGGTTAA ybaE 2358977 - 2360677 + | putative solute-binding protein ybaX 2360742 - 2361437 + | queuosine biosynthesis protein QueC TERM 3129 2361470 - 2361513 + T 100 -27 -2.52543 | GGCGCACGCGCCTTG TCCGGCCTGGCGATATTCAC TATG GTCAATATCGCCAGGCCGGA TCAGTTCAACGCCAT ybaW 2361941 - 2361543 - | hypothetical protein TERM 3130 2361651 - 2361627 - G 70 -2.7 -4.69415 | overlap 2361628 ATCAATACAAACAAA CGTGATGAGCG CAT CGGCCACCACC TGCCCTTCTGGCTCC ybaV 2362419 - 2362045 - | hypothetical protein TERM 3131 2362521 - 2362506 - R 100 -11.8 -4.39571 | opp_overlap 2362506 CTCAGAAATGGAAAA GGCCGC GAAA GCGGCC TTTGTGGGATACAAC TERM 3132 2362506 - 2362521 + r 95 -11.8 -3.89346 | opp_overlap 2362506 CTCAGAAATGGAAAA GGCCGC GAAA GCGGCC TTTGTGGGATACAAC ppiD 2364440 - 2362569 - | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 3133 2362661 - 2362682 + g 90 -5.1 -5.27923 | gap 1 TTTGCGCATTGTTCT GCG-TGATGC CCT GCACCATCGC TTTTTTCTGCGCTTC TERM 3134 2363541 - 2363559 + g 76 -11.8 -3.07947 | overlap 2363552 2363553 GTCGGTAGATTTCTC TTTCGCCA GCG TGGCGAAA TCTTCGCCCTTGTTC TERM 3135 2364695 - 2364676 - R 100 -10 -5.45652 | opp_overlap 2364675 2364676 ATCGCCAATAAAAAA GGCACATC AGTT GATGCGCC CTTGTACTTTGTCAC hupB 2365003 - 2364731 - | transcriptional regulator HU subunit beta TERM 3136 2365179 - 2365150 - R 100 -8.6 -5.72616 | gap 1, opp_overlap 2365149 2365150 AGCTATACAAAAAAA GGCTGGCAAGTCC GAAAT AG-CCTGCCAGCC CTGTTTTTATTAGCG lon 2367566 - 2365212 - | DNA-binding ATP-dependent protease La TERM 3137 2365571 - 2365583 + g 70 -3.3 -4.72986 | CTTCCGGCACGTGAA CGTGG ATA TCGCG TTTTTCGTAAAAGTC TERM 3138 2366620 - 2366633 + g 76 -3.1 -5.10029 | gap 1, overlap 2366616 2366621 2366630 TCGAGGATTTCCTGT G-CCTG ACG CAGGTC TTTTTTGACCTTGCT TERM 3139 2366621 - 2366631 + g 70 -6.8 -4.17355 | overlap 2366616 2366620 2366630 CGAGGATTTCCTGTG CCTG ACG CAGG TCTTTTTTGACCTTG TERM 3140 2367114 - 2367124 + g 100 -5.4 -5.80364 | overlap 2367067 GAGTGACGTCAGCAC TTCC GGC GGAA TTTTTTTGTTCAGCT TERM 3141 2367397 - 2367418 + g 89 -2.9 -5.67967 | overlap 2367400 TCATCCGTTGATGCT TCCTTCTGG GCGA CCAGCATGA TTTTTTTATCATGGT TERM 3142 2367724 - 2367696 - R 80 -6.7 -4.8048 | opp_overlap 2367701, overlap 2367701 TGTTTACAGGAAAAA CGAAAGGGGAGAT AAA ATCCCCCCTTTTT TGGCTAACTGATTGT TERM 3143 2367701 - 2367719 + r 100 -8.8 -5.09895 | opp_overlap 2367701 2367696 ACAGGAAAAACGAAA GGGGAGAT AAA ATCCCCCC TTTTTTGGCTAACTG TERM 3144 2367719 - 2367701 - R 91 -11 -4.3623 | opp_overlap 2367701, overlap 2367696 ACAGGAAAAACGAAA GGGGAGAT AAA ATCCCCCC TTTTTTGGCTAACTG clpX 2369023 - 2367752 - | ATP-dependent protease ATP-binding subunit clpP 2369898 - 2369275 - | ATP-dependent Clp protease proteolytic subunit TERM 3145 2370109 - 2370088 - R 100 -11.6 -5.93809 | opp_overlap 2370088 GCGTGACAAAAAAAA CCCGTCAC TGAAAG GTGACGGG TTTTTGTGCAAATTT TERM 3146 2370088 - 2370109 + r 100 -12.3 -4.86033 | opp_overlap 2370088 GCGTGACAAAAAAAA CCCGTCACT GAAA GGTGACGGG TTTTTGTGCAAATTT tig 2371443 - 2370145 - | trigger factor TERM 3147 2371734 - 2371711 - R 93 -9.6 -4.59984 | opp_overlap 2371716, overlap 2371716 AAAATTCAGACAAAA CAAAACGGCC CGTA GGCCGTTTTC ACATAATTCTGTAGC TERM 3148 2371716 - 2371729 + r 83 -9.5 -4.17425 | opp_overlap 2371716 2371711 TCAGACAAAACAAAA CGGCC CGTA GGCCG TTTTCACATAATTCT TERM 3149 2371729 - 2371716 - R 100 -9.5 -5.23292 | opp_overlap 2371716, overlap 2371711 TCAGACAAAACAAAA CGGCC CGTA GGCCG TTTTCACATAATTCT bolA 2372107 - 2371790 - | transcriptional regulator BolA TERM 3150 2371973 - 2371953 - G 86 -7.5 -4.73613 | overlap 2371967 TGACGATTAAGAAAA CGTTCGCCT GTA AAGCGATCG CTCACCAGCACGACC yajG 2372411 - 2372989 + | hypothetical protein TERM 3151 2373021 - 2373002 - f 100 -15 -4.03167 | opp_overlap 2373004 TAATAGCAACAACAA GACCCGGC AGAA GCCGGGTC TGTAGATGCCTATGT TERM 3152 2373004 - 2373019 + F 77 -11.8 -2.92091 | opp_overlap 2373002 ATAGCAACAACAAGA CCCGGC AGAA GCCGGG TCTGTAGATGCCTAT TERM 3153 2373667 - 2373682 + G 73 -6.1 -4.42806 | opp_overlap 2373661 TGGAACAAGCCGTCG TCGCG CCGCTA CGCGA TTTCTTTGGCCGTAA TERM 3154 2373989 - 2373977 - g 74 -3.4 -4.88736 | CATTACCGATAAAAA CATG TTCAG CATG GGCGCGGCGGTCTTT TERM 3155 2374439 - 2374452 + G 71 -8.1 -3.81755 | GACTGCGGTAGCGGT TGCCG TGTG CGGCA TTGTCTTTGGCGGGT ampG 2373033 - 2374508 + | muropeptide transporter TERM 3156 2374705 - 2374721 + F 76 -2.3 -5.29885 | opp_overlap 2374704 CCTTTTATTGATAAT TAATTGT TAA GCAATTG TTTTATTTTTACATT TERM 3157 2375349 - 2375336 - g 70 -3.1 -4.77036 | opp_overlap 2375343, overlap 2375337 GCGCATGACGAAAAA CCGAT CACC ATCGA AGTGGTTTCCATGGA TERM 3158 2375426 - 2375441 + G 95 -11.8 -4.42806 | opp_overlap 2375418 AACGAGATCGCCTTC CCGGCG AACA CGCCGG TTTATTTCAAAGTGA cyoA 2374961 - 2375917 + | cytochrome o ubiquinol oxidase subunit II TERM 3159 2375989 - 2376030 + G 95 -14.5 -3.46081 | opp_overlap 2375989, overlap 2375951 TCGTCATGGTAACGA TCGCTGCAATTATCGTCGG GGGA CTGGCGATACTGGCAGCGA TTACTTACTTCGGTA TERM 3160 2377874 - 2377863 - g 75 -5.8 -4.66833 | opp_overlap 2377862 CCGGAAGTCGAAAAA CTGG AAAG CCAG CATTTCGATGAGATT cyoB 2375928 - 2377919 + | cytochrome o ubiquinol oxidase subunit I cyoC 2377909 - 2378523 + | cytochrome o ubiquinol oxidase subunit III TERM 3161 2378739 - 2378768 + G 74 -10.1 -3.62572 | opp_overlap 2378729 ATGAACACCAAATCT GATGAAGGCTG GAACATGA CGGCCTTCATC TTTACCGTGCTGATC cyoD 2378523 - 2378852 + | cytochrome o ubiquinol oxidase subunit IV TERM 3162 2379285 - 2379308 + G 70 -9.5 -3.39895 | overlap 2379288 CGCTGATTGGTTCTC TCTCCGGCG CAGCGC CGCCGGTGA TTGGTTACTGCGCCG cyoE 2378864 - 2379754 + | protoheme IX farnesyltransferase TERM 3163 2379763 - 2379788 + T 100 -16.3 -4.69559 | opp_overlap 2379759 2379758 CTGGTAAAGACTTTA GATGGCGTATC GCTT GATACGCCATC TTTCTTTTCGCGTTT SPA2284 2380956 - 2379802 - | hypothetical protein SPA2285 2382794 - 2381283 - | putative periplasmic protein TERM 3164 2381634 - 2381651 + g 91 -4.1 -5.47399 | CTTAGCCGTTATCCC GCGAG AGAAAATA CTCGC TTTTTTTAGGGTTAC TERM 3165 2382081 - 2382095 + g 73 -5.6 -4.65895 | opp_overlap 2382092 CCCCAAGAGAGATTG GGCCTC AAC GACGCC TTTTTCCGTGGCGGC TERM 3166 2382300 - 2382290 - G 91 -2.4 -5.88471 | TACGACTAAAAAAAA GCGC ATC GCTC TCTGGCCTATTATTT SPA2286 2382969 - 2383103 + | transposase TERM 3167 2383370 - 2383347 - g 70 -5.3 -4.51097 | gap 1 TGAACGATTATAAAA TGACGC-CAG GGGAG CTGCGCGCCA CATGGAGTTTAGGGA yajR 2383331 - 2384695 + | major facilitator transporter yajQ 2385233 - 2384742 - | nucleotide-binding protein apbA 2385359 - 2386270 + | 2-dehydropantoate 2-reductase thiJ 2386233 - 2386823 + | hypothetical protein TERM 3168 2386897 - 2386850 - T 100 -15.8 -3.53444 | gap 1, opp_overlap 2386885, overlap 2386852 2386853 GGATGGCGGCGTAAA CACCTTATCCGGCCTACAAAACG GTA CAGTCTGTAGGCCGGATAA-GCG ACAGCGCCATCCGGC TERM 3169 2386896 - 2386852 - T 100 -17.3 -3.34517 | opp_overlap 2386885, overlap 2386850 2386853 ATGGCGGCGTAAACA CCTTATCCGGCCTACAAAACG GTA CAGTCTGTAGGCCGGATAAGC GACAGCGCCATCCGG TERM 3170 2386895 - 2386853 - T 100 -20.8 -2.60496 | opp_overlap 2386885, overlap 2386852 2386850 TGGCGGCGTAAACAC CTTATCCGGCCTACAAAACG GTA CAGTCTGTAGGCCGGATAAG CGACAGCGCCATCCG phnX 2387729 - 2386920 - | phosphonoacetaldehyde hydrolase phnW 2388842 - 2387739 - | 2-aminoethylphosphonate--pyruvate transaminase TERM 3171 2389298 - 2389283 - g 75 -6 -4.65895 | opp_overlap 2389284, overlap 2389284 GGCGGGAGCCAAAAA CCGCGC TACT GAGCGG CGTGTTAACCACCGT phnR 2388982 - 2389701 + | regulator of 2-aminoethylphosphonate uptake and metabolism operon TERM 3172 2390636 - 2390616 - g 93 -12.5 -4.05446 | opp_overlap 2390615 2390612 CCGGCCAACGACAAA GGCGAGCGC AGC GCGCTGGCC ATCCCTTATGTCATT phnS 2389899 - 2390912 + | periplasmic binding component of 2-aminoethylphosphonate transporter phnT 2390918 - 2392027 + | 2-aminoethylphosphonate ABC transporter ATP-binding protein phnU 2392030 - 2392899 + | membrane component of 2-aminoethylphosphonate transporter phnV 2392893 - 2393690 + | membrane component of 2-aminoethylphosphonate transporter thiI 2395182 - 2393734 - | thiamine biosynthesis protein ThiI TERM 3173 2394999 - 2395009 + g 75 -6.8 -4.49756 | overlap 2394982 GCGCGTCGCGAATCG CCAG ACG CTGG TTTTCATCTTTGGCG xseB 2395392 - 2395634 + | exodeoxyribonuclease VII small subunit TERM 3174 2396199 - 2396180 - g 71 -12.1 -2.53271 | overlap 2396179 2396177 TCATCGCCATAAGAC CGGCGCG CTCATT CGCGCCG CCGTTAGACTTGGCG ispA 2395635 - 2396534 + | geranyltranstransferase TERM 3175 2397040 - 2396984 - g 71 -8.1 -3.91042 | gap 3, opp_overlap 2396987, overlap 2396978 2396986 2396987 GAGAAAGAAGGCAAA GATCGCCACACCGTCTGTGTGATTGGCG ACGG CGCCA-TCAC-C-GCCGGTATGGCGTTT GAAGCAATGAATCAC TERM 3176 2397038 - 2396986 - g 74 -10.7 -3.5256 | gap 3, opp_overlap 2396987, overlap 2396978 2396984 2396987 GAAAGAAGGCAAAGA TCGCCACACCGTCTGTGTGATTGGCG ACGG CGCCA-TCAC-C-GCCGGTATGGCGT TTGAAGCAATGAATC TERM 3177 2396987 - 2397037 + G 81 -12 -3.54543 | gap 3, opp_overlap 2396978 2396987 2396986 2396984 AAAGAAGGCAAAGAT CGCCACACCGTCTGTGTGATTGGCG ACGG CGCCA-TCAC-C-GCCGGTATGGCG TTTGAAGCAATGAAT TERM 3178 2397037 - 2396987 - g 83 -14.2 -2.70451 | gap 3, opp_overlap 2396987, overlap 2396978 2396986 2396984 AAAGAAGGCAAAGAT CGCCACACCGTCTGTGTGATTGGCG ACGG CGCCA-TCAC-C-GCCGGTATGGCG TTTGAAGCAATGAAT TERM 3179 2398247 - 2398234 - g 73 -5.2 -4.63932 | GACGCTGGAAGAAAA CGCC ATTATG GGCG GCGCTGGCAGCGGCG dxs 2396558 - 2398420 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 3180 2399014 - 2398993 - g 76 -5.2 -4.82901 | gap 1, opp_overlap 2398998, overlap 2398998 CTGGCGCTACAAAAA CAACACGGC TGGGC GCCGT-TTG TCACCATGCAGGATC TERM 3181 2399211 - 2399190 - g 73 -5.3 -4.57569 | gap 1 TGACGTGGGCAAAAA TTTATACGCT GAA AGCG-ATAAA AATGATGCGCAAATA yajO 2398477 - 2399451 + | putative oxidoreductase pgpA 2400070 - 2399555 - | phosphatidylglycerophosphatase A thiL 2401025 - 2400048 - | thiamine monophosphate kinase TERM 3182 2401097 - 2401055 - R 88 -5.6 -5.61277 | gap 2, opp_overlap 2401062 2401066, overlap 2401056 CAGAAAAAAAGAAAA GGCCGG--AGACGGCGGG TATCGAGCG CCCGCTATCTTTCCGGCC TGTGAATCACTTTTT nusB 2401523 - 2401104 - | transcription antitermination protein NusB ribH 2402014 - 2401544 - | riboflavin synthase subunit beta TERM 3183 2401590 - 2401606 + g 74 -7.9 -4.17132 | overlap 2401582 2401591 ATTTCAAGCGCGGTC AGCGCAG CTT CTGCGCC TTTATTACCGGCTTT TERM 3184 2401591 - 2401605 + g 72 -11.4 -3.09556 | overlap 2401582 2401590 TTTCAAGCGCGGTCA GCGCAG CTT CTGCGC CTTTATTACCGGCTT ribD 2403206 - 2402103 - | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 3185 2402997 - 2403020 + g 70 -6.6 -4.07687 | opp_overlap 2403003, overlap 2402993 2403003 ACAGGGTTCAAGCGT GACATAGGCG GTTG CGCCTTTGGC TTTTGCGCCCGCCAT TERM 3186 2403003 - 2403014 + g 71 -7.2 -3.92659 | opp_overlap 2403003, overlap 2402993 2402997 TTCAAGCGTGACATA GGCG GTTG CGCC TTTGGCTTTTGCGCC ybaD 2403659 - 2403210 - | transcriptional regulator NrdR yajI 2403811 - 2404350 + | hypothetical protein TERM 3187 2404597 - 2404607 + F 74 -6.8 -4.21812 | opp_overlap 2404597 CGAAATATTTAGAAA CGCA AAT TGCG TTCTTTTCACTCCCG tsx 2404650 - 2405513 + | nucleoside-specific channel-forming protein tsx precursor TERM 3188 2405524 - 2405549 + F 72 -8.9 -3.5393 | opp_overlap 2405526, overlap 2405525 TCTAAACCTGCAAAA AAGGCCAGAGG TCGC CCTCTGGCCCG TTTCGGGCGCATGCT TERM 3189 2405525 - 2405548 + F 78 -12.4 -2.72144 | opp_overlap 2405526, overlap 2405524 CTAAACCTGCAAAAA AGGCCAGAGG TCGC CCTCTGGCCC GTTTCGGGCGCATGC TERM 3190 2405547 - 2405526 - f 100 -15.9 -5.07107 | opp_overlap 2405525 2405524 TAAACCTGCAAAAAA GGCCAGAGG TCGC CCTCTGGCC CGTTTCGGGCGCATG TERM 3191 2405770 - 2405811 + G 100 -11 -4.78848 | opp_overlap 2405794 CTAGGGTCAAGTTAG CCCCCGTAATGTTGC-CGGT GAAT ACCGAGCAATG-TGCGGGGG TTTTCTCTTTCCAGC SPA2311 2405568 - 2405894 + | hypothetical protein TERM 3192 2405959 - 2405940 - T 100 -6.4 -6.20267 | TTAAAAACAAAAAAA TCCCAACC TTGC GATCGGGA TTCCAGTGACAATGT TERM 3193 2406043 - 2406025 - T 74 -3.8 -5.00616 | overlap 2406026 CCGGGGCTGAAAAAA TGTCAGAT TGC ATCCGACC TACGAAAACCAATAG TERM 3194 2406130 - 2406144 + T 72 -2.8 -5.06961 | GCACCAACAACTTTG TCAGCA GCC TGCTTA TTTCTTTTTGTTCAT yajD 2406489 - 2406142 - | hypothetical protein SPA2313 2407351 - 2406659 - | DeoR family transcriptional regulator TERM 3195 2406951 - 2406941 - G 74 -8.2 -3.9749 | overlap 2406942 ATGGATAAGATCAAA CGCG CTG CGCG AATGTGGAGATGTAC SPA2314 2407742 - 2407377 - | hypothetical protein TERM 3196 2407862 - 2407843 - R 100 -10 -6.02914 | GGTACATAAAAAAAA TCCCGATC GCAT GACCGGGA TTCAGATAACACTTA TERM 3197 2407895 - 2407919 + r 74 -5.6 -4.72486 | opp_overlap 2407898 2407899 TACGCGTTTACGGCA GAATGGACGG CTGAT CCGCCCCTTC TTTTTCGACTTTCTG secF 2408858 - 2407887 - | preprotein translocase subunit SecF secD 2410716 - 2408869 - | preprotein translocase subunit SecD TERM 3198 2410577 - 2410607 + g 89 -13.4 -3.53091 | gap 1 TGGATCAGCGTTTGC TCACTGGCG-GCG ACGCCG CGCACGCCAGTGA TTTGAACAGCCGGAT yajC 2411076 - 2410744 - | preprotein translocase subunit YajC tgt 2412226 - 2411099 - | queuine tRNA-ribosyltransferase queA 2413487 - 2412423 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 3199 2412943 - 2412971 + g 86 -7.9 -4.70659 | opp_overlap 2412936 TCGTCAAAGTGCAGC CCGGCGGTCGGCG CGG CGACGGCGCCCGG TTTTTCACTGTAGAC yajB 2413581 - 2414162 + | acyl carrier protein phosphodiesterase TERM 3200 2414255 - 2414228 - f 76 -7.8 -4.36914 | TTCGCTGTCATAAAA GGGTCATCATTA CGAT TTATAATGACCC GATCGATAGGCAAAA SPA2321 2414372 - 2414974 + | peroxidase TERM 3201 2415010 - 2414993 - T 100 -12.7 -4.42653 | opp_overlap 2414993 AGTGCATTGATAAAA GGCTCGC AATC GCGAGCC TTTTTTATGCGTGAG TERM 3202 2414993 - 2415010 + T 100 -12.7 -5.28176 | opp_overlap 2414993 AGTGCATTGATAAAA GGCTCGC AATC GCGAGCC TTTTTTATGCGTGAG malZ 2416863 - 2415046 - | maltodextrin glucosidase TERM 3203 2416662 - 2416705 + g 75 -11.6 -3.36515 | gap 1, overlap 2416660 CTAACGCGATATTGA GCGTCGCTCGCCAC-GCCG TCACGCC CGGCTGCGGCTGGCGGCGC TGTTTGCGCATCGCC proY 2418395 - 2417025 - | putative proline-specific permease TERM 3204 2418448 - 2418426 - R 100 -16.3 -5.64304 | opp_overlap 2418429 CAACACAATAAAAAA CCACGGGGC GTTAA GCCCCGTGG TGTACACATATGTCA TERM 3205 2418429 - 2418445 + r 71 -10.8 -2.63301 | opp_overlap 2418426 CACAATAAAAAACCA CGGGGC GTTAA GCCCCG TGGTGTACACATATG brnQ 2419789 - 2418470 - | branched chain amino acid transport system II carrier protein TERM 3206 2420125 - 2420109 - R 80 -9.5 -3.98747 | CAAAAAATCACCAAA CGTTGAA TGT TTCAACG AGCCCGTCTTAACTG TERM 3207 2420171 - 2420150 - R 100 -13.1 -4.90525 | opp_overlap 2420153 TAACTGCAAAGAAAA TAAGCCAGC ATCC GCTGGCTTA TGGAAAGTTATACTT TERM 3208 2420153 - 2420168 + r 77 -10.4 -3.31799 | opp_overlap 2420150 CTGCAAAGAAAATAA GCCAGC ATCC GCTGGC TTATGGAAAGTTATA phoR 2421493 - 2420198 - | phosphate regulon sensor protein TERM 3209 2421006 - 2421021 + g 74 -4.6 -4.68593 | ACCAAATGAAGCGGA CGGGTG AAAT CACGCG TTTTTAAATACTGGG TERM 3210 2421433 - 2421417 - G 100 -6.5 -5.69379 | AGATAACCAAAAAAA GCGCTAA GGA TAAGCGC GGGGATGCAACAGAG TERM 3211 2421561 - 2421520 - R 95 -13.1 -3.85389 | gap 1 CCTCAAGAATGGAAA GCCTTCTCCGCCAG-AAACC TGT GATCAACTGGCGGAAAAGGC ATTAAAAGCGGGTCG phoB 2422204 - 2421563 - | phosphate regulon transcriptional regulatory protein PhoB TERM 3212 2422594 - 2422610 + G 72 -3.7 -4.73388 | TCAGGTGGATGCCAT TATTGTC GCT GGCGATA TTTTTGATACCGGTT sbcD 2422466 - 2423668 + | exonuclease subunit SbcD TERM 3213 2424386 - 2424364 - g 86 -9.9 -4.24075 | gap 1, overlap 2424365 ACTGACGAAGAGAAA CGCCTGCTGG CCGA CCAGCAGG-G ACAGCAGCAGCACCT TERM 3214 2424506 - 2424490 - g 77 -4.4 -4.83615 | gap 1, overlap 2424491 GAGGCGCGAGAAAAA GCGCAGC CGCA GCT-CGC GGCGTTGACACTGGC TERM 3215 2425573 - 2425627 + G 76 -10.6 -3.75153 | opp_overlap 2425539 GTAGCGCGCTTTACC GCGCAGATTGCGCAGCGTCAGGCGTC GCT GACGGCTGATTTGGCGCAGTATACGC TTTCCCTTCCAGCGC TERM 3216 2426490 - 2426508 + G 71 -10.2 -3.28712 | CTGGCAGGCCGACGC CGTGCGCG ATA CGCGAACG TTATCAGGCGGCGAA sbcC 2423665 - 2426805 + | exonuclease subunit SbcC TERM 3217 2426944 - 2426958 + F 74 -5.6 -4.64861 | overlap 2426945 AATTCACAGCCACAG CGCGCA ACA TGCGCC TTTATTTTCGGCAGG TERM 3218 2426945 - 2426957 + F 70 -9.1 -3.38435 | overlap 2426944 ATTCACAGCCACAGC GCGCA ACA TGCGC CTTTATTTTCGGCAG TERM 3219 2427257 - 2427298 + G 77 -3.5 -5.0538 | gap 1, overlap 2427258 2427259 TCGTCATATCTGATG CTCGCCGT-CGGCAGACTGG TTT CCGGCTTTCCGCACGGCGCC TTTTTTGGCGTCGGC TERM 3220 2427444 - 2427454 + G 74 -2.4 -5.1356 | GCCAGGAATTTAGCT GGCG CTA CACC TTTTTATTGATCGCG TERM 3221 2427480 - 2427497 + G 76 -5.5 -4.79352 | opp_overlap 2427480 TCGCGGTTTTCAACA TCGCCGT GCTC ACCGCGA TTTTCTTCTGGGTGC TERM 3222 2427938 - 2427928 - g 77 -8.2 -4.07568 | overlap 2427929 CCTGCTGCTGCAAAA CGCC AAA GGCG GCGAACTGCTGGGCG araJ 2426978 - 2428150 + | protein AraJ yajF 2429078 - 2428170 - | fructokinase TERM 3223 2428291 - 2428269 - G 77 -4.8 -4.85782 | opp_overlap 2428269 2428282 GCCGCCAAAAACAAA CGATTTCATC AGC GACGGAACCG TCTTGTACAGGCGCT TERM 3224 2429478 - 2429466 - g 74 -7.7 -4.13767 | overlap 2429447 CTCTGGAGGCGAAAA TCCAG AAA CTGGA AGCCGATCAGGGACG rdgC 2429204 - 2430115 + | recombination associated protein TERM 3225 2430117 - 2430152 + T 74 -10.4 -3.17723 | gap 1, opp_overlap 2430121 AAGCGCAGCGCTAAC CAGAGGGT-CCCTCTCC GCC GGAGAGGGGACTCACCG TTCCGTTACAAATAG TERM 3226 2430148 - 2430121 - T 72 -10.6 -2.90723 | gap 1, opp_overlap 2430117 GCAGCGCTAACCAGA GGGT-CCCTCTCC GCC GGAGAGGGGACTC ACCGTTCCGTTACAA yaiE 2430442 - 2430158 - | hypothetical protein aroM 2431190 - 2430513 - | hypothetical protein yaiA 2431632 - 2431441 - | hypothetical protein TERM 3227 2431566 - 2431578 + g 74 -4.7 -4.68593 | ACCACGTCACCGTCT GGCCC GGC GTGCC TTTTTCAATGGTGAC aroL 2432204 - 2431659 - | shikimate kinase II yaiI 2432844 - 2432389 - | hypothetical protein proC 2432984 - 2433793 + | pyrroline-5-carboxylate reductase adrA 2434920 - 2433808 - | diguanylate cyclase AdrA psiF 2435332 - 2435012 - | hypothetical protein TERM 3228 2435627 - 2435571 - R 100 -21.3 -2.82635 | ACTGTTATTACCATA GCCGCTTCGTTTTTATTTTCTTCTG GTTAATA CAGAGCAAAATAAAAACGAAGCGGC CAGGGCTATTTTATA yaiB 2435941 - 2435681 - | hypothetical protein TERM 3229 2436230 - 2436205 - R 85 -14.1 -3.03781 | overlap 2436200 TTAATTTAAACCATA TCGTAACGGCA GAAG CGCCGTTACGA TGCACCGCTATTGGC SPA2341 2437449 - 2436238 - | efflux pump TERM 3230 2436813 - 2436803 - G 76 -3.2 -5.04249 | GTGGTAAAAAACAAA CTGA TCA CCAG CGCAGGATAAGGTAA TERM 3231 2436850 - 2436840 - G 74 -4.6 -4.7078 | overlap 2436824 GTAACGACGCAAAAA CGGC TTT ACCG CTCAGGCGTTCGCTT SPA2342 2438331 - 2437618 - | hypothetical protein TERM 3232 2438345 - 2438357 + r 75 -6.2 -4.49311 | overlap 2438353 ATTATGGCAGAACCC CGCG AAACC CGCG TTTTGTCGTGGTAAT TERM 3233 2439503 - 2439534 + r 90 -10.2 -4.21908 | gap 1, overlap 2439505 CACGATGTAATAGCG CACGCCCGAT-AGCG CAA CGTTTATCGGGCGTC TTTTACCTCATCCTC TERM 3234 2439505 - 2439532 + r 93 -12.8 -3.70674 | gap 1, overlap 2439503 CGATGTAATAGCGCA CGCCCGAT-AGCG CAA CGTTTATCGGGCG TCTTTTACCTCATCC yaiZ 2439738 - 2439523 - | hypothetical protein TERM 3235 2440269 - 2440284 + G 71 -4.6 -4.62336 | GGGCTGCCTCATTTT CGCCGT TATC ACCGCG TTTTTACGCTGGCGT yaiY 2440006 - 2440314 + | hypothetical protein yaiW 2441446 - 2440352 - | putative lipoprotein sbmA 2442681 - 2441461 - | transport protein TERM 3236 2443137 - 2443153 + G 70 -5.1 -4.46212 | overlap 2443139 CTGATATCGTTGATC GTTATGC CGA GCATATC TTTTATGGTAGCGGC ampH 2443028 - 2444185 + | beta-lactamase/D-alanine carboxypeptidase TERM 3237 2444188 - 2444223 + T 77 -3.9 -5.19251 | gap 1, overlap 2444189 2444192 TCCTGCATCCTGAGT CGTCGCGCCTCGCGCT ATATC AG-ACGAGGCGCAACC TTTTTGTTAATATTC TERM 3238 2444243 - 2444271 + T 72 -5.4 -4.40298 | gap 1 TGTTAATATTCGGAG GGCAAAC-GGTTA ATAC TGATCAGTTTGCC TTTATTCATTTCAAT yaiV 2444853 - 2444230 - | putative DNA-binding transcriptional regulator TERM 3239 2444895 - 2444872 - R 100 -15.4 -3.61715 | opp_overlap 2444872 CATTCCTTGCAATAA TGCCCGTCAA GTCC TTGACGGGCA TTTTTCAGTTTAAAT TERM 3240 2444872 - 2444895 + r 100 -15.4 -4.81851 | opp_overlap 2444872 CATTCCTTGCAATAA TGCCCGTCAA GTCC TTGACGGGCA TTTTTCAGTTTAAAT yaiU 2447884 - 2444939 - | putative flagellin structural protein TERM 3241 2447853 - 2447867 + g 73 -5 -4.57569 | GCCAATGCTAATTGT GAGACT ACA AGTTTC TTTTTCCAGGAGTGC hemB 2448397 - 2449371 + | delta-aminolevulinic acid dehydratase TERM 3242 2449382 - 2449400 + T 93 -13.8 -3.5936 | GTTAATTCTGTTACA GGGCGGCG CGC TGCCGCCC TTTCCCGACTTTACA prpE 2451361 - 2449475 - | propionyl-CoA synthetase prpD 2452853 - 2451402 - | 2-methylcitrate dehydratase TERM 3243 2451488 - 2451516 + g 76 -10.9 -3.74303 | overlap 2451483 2451489 CCAGAATGCGTTGCT GCTGGCGAGTCGG GAA CTGACGCGCCAGG TTAATTTTAAATTTT TERM 3244 2451489 - 2451515 + g 83 -14.4 -2.82955 | overlap 2451488 2451483 CAGAATGCGTTGCTG CTGGCGAGTCGG GAA CTGACGCGCCAG GTTAATTTTAAATTT TERM 3245 2451824 - 2451848 + g 85 -4.2 -5.28778 | gap 1, opp_overlap 2451789, overlap 2451821 GGATACAGTGATCGC GGTCCGC-CGG GTTA TTGAGCGGGCC TTTTTTATCGATAAT prpC 2454062 - 2452893 - | methylcitrate synthase TERM 3246 2453551 - 2453572 + g 71 -10.1 -3.57792 | opp_overlap 2453549 AGATGCAGGAAATGG CCGCCGATG GAAT CATCGTCGG TTTCCGGCTGAATAC TERM 3247 2454161 - 2454135 - R 78 -12.2 -2.64155 | opp_overlap 2454130 2454136 2454157, overlap 2454131 GGCGGGTTAAACGTA GTGCCATCCGGC ATT GCCTGATGGCGC CTTCGCCTTATCAGG prpB 2455072 - 2454185 - | 2-methylisocitrate lyase TERM 3248 2456402 - 2456385 - g 74 -4.7 -4.7373 | GTACTGGAGGAAAAA GCCGTCA CTCG CGTCGGC GGACACCAGCCGATC TERM 3249 2456535 - 2456579 + G 87 -8.5 -4.57569 | overlap 2456521 2456518 2456536 CGCCTGACGCTTCCT CCTTTGCGCGAGCGGCAGGCT GAT ATTTTGCCGCTGGCGGAAAGC TTTTTAAAACAGTCG TERM 3250 2456536 - 2456578 + G 80 -12 -3.3422 | overlap 2456521 2456518 2456535 GCCTGACGCTTCCTC CTTTGCGCGAGCGGCAGGCT GAT ATTTTGCCGCTGGCGGAAAG CTTTTTAAAACAGTC TERM 3251 2456714 - 2456724 + G 100 -8.2 -5.42259 | GCGTAATATGATGGA GCGC CTG GCGC TTTTTTTAAGCGTCG prpR 2455338 - 2456963 + | propionate catabolism operon regulatory protein TERM 3252 2457085 - 2457049 - T 83 -13.2 -3.14344 | gap 1, opp_overlap 2457055, overlap 2457053 2457055 GACGGTTGCCAGGAA TAAATATACCCGCC-GG AAAC CCAGGCGGGTATTTTTA TGATGCAACGCTTTT TERM 3253 2457081 - 2457053 - T 87 -9.6 -4.24342 | gap 1, opp_overlap 2457055, overlap 2457049 2457055 GTTGCCAGGAATAAA TATACCCGCC-GG AAAC CCAGGCGGGTATT TTTATGATGCAACGC TERM 3254 2457055 - 2457079 + T 100 -12.2 -4.91109 | gap 1, opp_overlap 2457055 2457053 2457049 TGCCAGGAATAAATA TACCCGCC-GG AAAC CCAGGCGGGTA TTTTTATGATGCAAC TERM 3255 2457079 - 2457055 - T 93 -12.2 -3.72374 | gap 1, opp_overlap 2457055, overlap 2457053 2457049 TGCCAGGAATAAATA TACCCGCC-GG AAAC CCAGGCGGGTA TTTTTATGATGCAAC yahO 2457374 - 2457099 - | hypothetical protein TERM 3256 2457275 - 2457292 + g 91 -3.5 -5.5943 | gap 1, overlap 2457275 2457276 2457278 TCGTGTATTCGGAGG C-GACTTT ATC AAAGTCCG TTTTTTTCATGATTT TERM 3257 2457337 - 2457320 - G 71 -8.5 -3.85698 | TTTCTGCGGCATAAA CGTTTGT CACG ACAAACG CTAATGCGCCAAGCA TERM 3258 2457741 - 2457761 + G 100 -12.5 -4.63932 | opp_overlap 2457700 GTCATCACCGGCCTG GGCGTCGCC ACG GGAGACGCC TTTTATTCCGGGCTG TERM 3259 2457991 - 2458008 + G 76 -2.7 -5.08824 | CCAATCCGCAAACCG TACTGTT TTTT ATCAGTA TTTTTTCCGTAACGC yahN 2457606 - 2458238 + | RhtC-like transporter foxA 2460369 - 2458279 - | ferrioxamine B receptor precursor TERM 3260 2458978 - 2459002 + g 100 -9.4 -4.84359 | gap 1, opp_overlap 2458978 2458977 GTCGAACAGATAAAG CAACG-CAGCA CGGG TGCTGACGTTG TTTTTATCGAGATCG TERM 3261 2459864 - 2459880 + g 74 -7.9 -4.08767 | opp_overlap 2459875 AGCTTCACTTCTCCT CCGGCAT CAA ACGCCGG TTTTCGCGACGTCAA SPA2360 2461537 - 2460533 - | AraC family transcription regulator TERM 3262 2461728 - 2461702 - R 100 -15.2 -4.83169 | ATCTGTCGACAAAAA CGCACTTTCGCC AGC GACGAAAGCGCG TCCGGGGGGGTATCA SPA2362 2462886 - 2461876 - | terminal oxidase subunit II TERM 3263 2462701 - 2462685 - G 75 -5.7 -4.59853 | overlap 2462668 GGAACGCGCCAAAAA GCCCGGC CCC GCCCAGC ACCAGCCAGGTTTCG SPA2363 2464286 - 2462883 - | terminal oxidase subunit I SPA2364 2464504 - 2464403 - | hypothetical protein TERM 3264 2464731 - 2464703 - R 77 -10.2 -3.40299 | opp_overlap 2464703 2464717 TTAGCACAGGGATAA TGACCGCAACGC TCGCT GCGCGGCGGCCA TTTTATATAGTCTAT TERM 3265 2464703 - 2464731 + r 74 -5.8 -4.60143 | opp_overlap 2464703, overlap 2464717 TTAGCACAGGGATAA TGACCGCAACGC TCGCT GCGCGGCGGCCA TTTTATATAGTCTAT res 2467750 - 2464781 - | DNA restriction (DNA helicase mod 2469721 - 2467763 - | type III restriction-modification system StyLTI enzyme mod TERM 3266 2469904 - 2469873 - R 82 -13 -2.80988 | gap 1, opp_overlap 2469871 2469874 2469886, overlap 2469866 2469870 CCACAGGAGGAAGGA GCGCTCCCGGCGACA GTA TG-CGCCAGGAGCGT AGTGTTTACGTGCGA TERM 3267 2469874 - 2469903 + r 87 -14.3 -2.86124 | gap 1, opp_overlap 2469866 2469873 2469870, overlap 2469871 2469886 CACAGGAGGAAGGAG CGCTCCCGGCGACA GTA TG-CGCCAGGAGCG TAGTGTTTACGTGCG SPA2367 2471163 - 2469910 - | putative metabolite transport protein TERM 3268 2470307 - 2470320 + g 86 -6.7 -5.00884 | AGCGCAAGAAAGGCG GCGAT CATG ATCGC TTTTTTACGCCCAAT TERM 3269 2470381 - 2470362 - G 75 -7.1 -4.4009 | opp_overlap 2470361 2470362, overlap 2470364 GCGTACCGTAGAAAA TACCGCC GAGCAT GGCGGCA ATGTTATAAAAAATT TERM 3270 2471247 - 2471267 + H 78 -6.1 -4.60678 | opp_overlap 2471249 2471250, overlap 2471250 TCAAAGCGACGTAAC AAGGTAGCG TTG CGCTACTTA TTTGTTATCTTTTTG TERM 3271 2471250 - 2471264 + H 87 -10 -4.34559 | opp_overlap 2471250 2471249, overlap 2471247 AAGCGACGTAACAAG GTAGCG TTG CGCTAC TTATTTGTTATCTTT TERM 3272 2471468 - 2471482 + G 70 -7 -4.07568 | opp_overlap 2471477 GATTACCTTTCGCGC GGCGGG AAA CCGGCC TTTTGCAGGGCGGCG SPA2369 2471357 - 2471824 + | hypothetical protein TERM 3273 2472388 - 2472331 - T 74 -8.09999 -3.88603 | opp_overlap 2472335, overlap 2472343 2472379 AGCGAGAAAAAGCAA GGTTAGCCCAAATAGCGCGCGCGTCGC CAGT GCGGCGCGCGCGCTAAACAGGCATATA TTGCCTGCAAAATAA TERM 3274 2472335 - 2472384 + T 93 -15.5 -3.10344 | opp_overlap 2472331 2472343 2472379 AGAAAAAGCAAGGTT AGCCCAAATAGCGCGCGCGTCGC CAGT GCGGCGCGCGCGCTAAACAGGCA TATATTGCCTGCAAA TERM 3275 2472376 - 2472343 - T 100 -23.9 -3.61103 | opp_overlap 2472335, overlap 2472331 CAAGGTTAGCCCAAA TAGCGCGCGCGTCGC CAGT GCGGCGCGCGCGCTA AACAGGCATATATTG SPA2370 2472765 - 2472406 - | lipoprotein SPA2371 2473047 - 2472823 - | hypothetical protein SPA2372 2473585 - 2473058 - | transcriptionl regulator SPA2373 2474367 - 2473843 - | outer membrane protein SPA2375 2475972 - 2475289 - | transmembrane regulator SPA2376 2477622 - 2476072 - | putative rtn protein TERM 3276 2476973 - 2476962 - G 100 -4.4 -5.74684 | GAACAAAAATAAAAA GGTT TTGT AACC AGTATGCCGATAACG SPA2377 2478448 - 2477948 - | hypothetical protein SPA2378 2479155 - 2478421 - | transmembrane regulator TERM 3277 2478813 - 2478830 + gH 100 -6.3 -5.97575 | overlap 2478812 TAACGTTTTCATCAC TCACCTT TAGG GAGGTGA TTTTTTTTATAGGTT stbA 2479819 - 2480355 + | fimbrial protein TERM 3278 2480365 - 2480390 + F 95 -13.3 -4.18018 | overlap 2480366 AAATAATTGTCGCTA CGGTCTGGCGT TGAA ACGCCAGACCA TTTTCAATCGCCAGG TERM 3279 2480366 - 2480389 + F 100 -16.8 -3.10597 | overlap 2480365 AATAATTGTCGCTAC GGTCTGGCGT TGAA ACGCCAGACC ATTTTCAATCGCCAG stbB 2480417 - 2481178 + | fimbrial chaperone protein TERM 3280 2481632 - 2481647 + G 87 -8.2 -4.58395 | opp_overlap 2481598 TTCAGAGTGGGATAG CGGCGC GCTG GCGCTG TTTTTACGCCATAAC TERM 3281 2482460 - 2482436 - g 71 -9.9 -3.46602 | overlap 2482439 GCGCGCAGAGCATAA CGAGCGCCAAC AAG GCTGGCGCGCA GAACTCAGTTACAGC TERM 3282 2482457 - 2482439 - g 75 -12.4 -2.88069 | overlap 2482436 CGCAGAGCATAACGA GCGCCAAC AAG GCTGGCGC GCAGAACTCAGTTAC stbC 2481162 - 2483723 + | outer membrane fimbrial usher protein TERM 3283 2484728 - 2484706 - gf 85 -12.6 -3.33696 | overlap 2484710 TTTGTCGTTAATCAA CCCACCGCCG TGG CGGCGGCGCG TCGCCTGGGGCTAAC TERM 3284 2484724 - 2484710 - gf 78 -12.8 -2.60244 | overlap 2484706 TCGTTAATCAACCCA CCGCCG TGG CGGCGG CGCGTCGCCTGGGGC stbD 2483728 - 2485053 + | putative fimbrial protein TERM 3285 2485267 - 2485254 - gT 70 -5.2 -4.46656 | opp_overlap 2485257 2485259 CGGATAATAGCAAAA CGCC GCTGGT GGCG CTGCCGCCGGTATTT TERM 3286 2485259 - 2485277 + GT 77 -10.2 -3.38046 | opp_overlap 2485254, overlap 2485257 AATAGCAAAACGCCG CTGGTGGC GCT GCCGCCGG TATTTAAAATGCAGC TERM 3287 2485648 - 2485632 - gT 77 -8 -4.07568 | TGGTTGCGCCGAAAA CAGCAC TTGAT GTGCTG CTAACACGCTCGCCA stbE 2485019 - 2485777 + | fimbrial chaperone protein TERM 3288 2485812 - 2485787 - T 77 -10.5 -3.38046 | overlap 2485785 2485788 TTTTGATGGGAAATA TTCAGGGATAC AATC GTATCCCTGAG GCAAGCCAGACTCAG TERM 3289 2485811 - 2485788 - T 83 -14 -2.62613 | overlap 2485787 2485785 TTTGATGGGAAATAT TCAGGGATAC AATC GTATCCCTGA GGCAAGCCAGACTCA SPA2384 2486222 - 2485824 - | hypothetical protein TERM 3290 2486600 - 2486563 - H 82 -7.8 -4.58395 | opp_overlap 2486567 2486571, overlap 2486566 CCCATCTTCGAAAAA CATGCAAAGCCTTGCA AGCCGA TGCAAAGCTTTGTGTG TCCCGTTTTTGTCCC TERM 3291 2486663 - 2486643 - H 87 -6.9 -5.16071 | AATCAGCAATAAAAA TTGATCGGT AAC AACGATCAA TTAACGCGCAAACAA SPA2385 2486780 - 2487142 + | O-antigen conversion: glucosyl transferase SPA2386 2487139 - 2488071 + | O-antigen conversion: bactoprenyl transferase TERM 3292 2488977 - 2488991 + G 91 -7.2 -4.85599 | opp_overlap 2488989 CATCAATGTTTTTCA TCATTG GAC CAATGA TTTTTCTAAAATCAC SPA2387 2488061 - 2489518 + | O-antigen conversion: translocase TERM 3293 2489568 - 2489541 - T 100 -14.4 -4.48072 | opp_overlap 2489541 2489547, overlap 2489547 ACATTTACCATAAAA TAAAAATGGGTG TTTA CACCCATTTTTA TTACATATCTAAAGT TERM 3294 2489541 - 2489568 + T 90 -14.4 -3.16177 | opp_overlap 2489541 2489547, overlap 2489547 ACATTTACCATAAAA TAAAAATGGGTG TTTA CACCCATTTTTA TTACATATCTAAAGT TERM 3295 2489547 - 2489562 + T 100 -9 -5.12068 | opp_overlap 2489541 2489547, overlap 2489541 ACCATAAAATAAAAA TGGGTG TTTA CACCCA TTTTTATTACATATC TERM 3296 2489562 - 2489547 - T 100 -9 -5.56263 | opp_overlap 2489547 2489541, overlap 2489541 ACCATAAAATAAAAA TGGGTG TTTA CACCCA TTTTTATTACATATC gp9 2491580 - 2489577 - | tailspike TERM 3297 2491016 - 2491001 - G 72 -3.9 -4.82901 | opp_overlap 2491005, overlap 2491002 TGCTTTCCATAAAAA CCCCG GCAATG CGGGA ACCTTTGCCTAATTT TERM 3298 2491627 - 2491605 - H 82 -12 -3.39142 | opp_overlap 2491601 TCCAGATGCAAGGAA TCGCCGCAGC GTG GCTACGGCAA TGCGTCATTAAGACC TERM 3299 2491636 - 2491654 + H 77 -10.4 -3.35679 | opp_overlap 2491639, overlap 2491639 ACGGCAATGCGTCAT TAAGACCA CGG TGGTCTTA TTGTGGATACAACCA mnt 2491716 - 2491964 + | regulatory TERM 3300 2491981 - 2491962 - T 100 -9.2 -5.47218 | opp_overlap 2491964, overlap 2491964 TTCTATCGAAAAAAA TAGCCCGG CGAA CCGGGCTT TACTCATTTTTTGCA TERM 3301 2491964 - 2491979 + T 95 -11.8 -3.98747 | opp_overlap 2491962 2491964 CTATCGAAAAAAATA GCCCGG CGAA CCGGGC TTTACTCATTTTTTG TERM 3302 2491979 - 2491964 - T 100 -11.8 -4.37763 | opp_overlap 2491964, overlap 2491962 CTATCGAAAAAAATA GCCCGG CGAA CCGGGC TTTACTCATTTTTTG gp16 2494348 - 2492417 - | DNA transfer protein gp20 2495685 - 2494348 - | DNA transfer protein gp7 2496417 - 2495728 - | DNA transfer protein TERM 3303 2496246 - 2496277 + g 70 -6.6 -4.13014 | CGGCGGCGTAAGGTG CCAACTGTTCCATC ACGC GATTGAATTGTTGG TTTTGCAGGTCTGCG gp14 2496875 - 2496420 - | hypothetical protein TERM 3304 2499960 - 2499973 + r 71 -9.5 -3.24032 | opp_overlap 2499960, overlap 2499958 ACCTCAAATAAGAAA GGGGC CGAA GCCCC TGTTAGTTACGCAGT TERM 3305 2499973 - 2499960 - R 93 -9.5 -4.57581 | opp_overlap 2499958 2499960 ACCTCAAATAAGAAA GGGGC CGAA GCCCC TGTTAGTTACGCAGT TERM 3306 2500213 - 2500177 - R 77 -11 -3.21099 | gap 1, overlap 2500194 CGTGGTTAGCAGGAA TGGGCTGA-GACACAAT ACGG ATGGCGTCATCAGCCCA GAACACGTTGGTGCG gp1 2504200 - 2502197 - | portal protein SPA2395 2507837 - 2507316 - | hypothetical protein TERM 3307 2507625 - 2507656 + g 95 -12.5 -4.19817 | opp_overlap 2507634 TCGTGCCTTGCTTGT TTTTACATACCCG GAATCA CGGGTATGTAGAA TTTTCGATGGCTCAC TERM 3308 2508007 - 2507990 - R 100 -10.5 -5.1287 | opp_overlap 2507990 2507989 TGCAGATGTAAAAAA GCCCCGC AAAT GCGAGGC ATTTTCCTGAAAGTC SPA2396 2508499 - 2508050 - | hypothetical protein gp19 2508954 - 2508517 - | lysozyme gp13 2509264 - 2508938 - | lysis (holin) TERM 3309 2509434 - 2509451 + r 100 -8.4 -5.23292 | opp_overlap 2509433 CCCATTTTCACGAAT CCCAGC CATAGC GCTGGG TTTTCTTTTGTGTAA TERM 3310 2509568 - 2509591 + r 70 -5.2 -4.42062 | opp_overlap 2509567 2509568 CTTAAAACGCAAAAT GCCCCGAG CGGTTAAA CTCAGGGC TTTATTTAACGAGTG SPA2399 2510322 - 2509699 - | antitermination TERM 3311 2510255 - 2510282 + g 100 -12.8 -4.58395 | gap 1 GAGTCAGAAGCCGTA GCCCG-TGGTGAG TCG CTCATCATCGGGC TTTTTGGCGAATGAA ninH 2510507 - 2510319 - | hypothetical protein rus 2510866 - 2510504 - | hypothetical protein SPA2402 2511153 - 2510863 - | hypothetical protein TERM 3312 2511180 - 2511190 + r 75 -3.2 -5.17353 | CGCAATTGAAGAATT GACT GAA GGTC TTTTTTAATAAATAT ninF 2511527 - 2511351 - | hypothetical protein ninX 2511861 - 2511520 - | hypothetical protein ninE 2512040 - 2511864 - | hypothetical protein ninD 2512180 - 2512007 - | hypothetical protein ninB 2512623 - 2512177 - | hypothetical protein SPA2408 2512876 - 2512580 - | hypothetical protein TERM 3313 2513546 - 2513525 - R 86 -2.9 -5.68489 | overlap 2513536 2513537 2513545 CAGAACAATAAAAAA CGTCAGAAG AATC CATCCAACG CCAATGCATTTGATG SPA2409 2513660 - 2513577 - | hypothetical protein TERM 3314 2513630 - 2513609 - G 100 -8.7 -5.27335 | gap 1, opp_overlap 2513609 TCCCCCAAATAAAAA GGCCTGC-GA TTA CCAGCAGGCC TGTTACAAGCTCAGT gp12 2515096 - 2513660 - | DNA replication (helicase) gp18 2515985 - 2515086 - | DNA replication TERM 3315 2515448 - 2515476 + g 74 -7 -4.27463 | gap 1, overlap 2515451 TTTCGTCTGCTGCGG TACTCTCTAATAC GTTA GTATTAGAGA-TA TTATTTATATTATTG TERM 3316 2515451 - 2515474 + g 79 -11.2 -3.70926 | overlap 2515448 CGTCTGCTGCGGTAC TCTCTAATAC GTTA GTATTAGAGA TATTATTTATATTAT SPA2412 2516124 - 2515978 - | hypothetical protein TERM 3317 2516163 - 2516191 + r 100 -11.8 -5.54907 | opp_overlap 2516162 GTCTTTCTACATCAG GCCTCGAAGAAT TCGCC GTTCTTCGGGGC TTTTTCTTTTGTCAG SPA2413 2516440 - 2516159 - | transcriptional activator-regulatory protein SPA2414 2516877 - 2517566 + | transcriptional activator-regulatory protein TERM 3318 2517642 - 2517659 + F 100 -9.1 -5.10461 | opp_overlap 2517640 2517642 TGATTGTGTGAAACA GGTCGCA GAAA TGCGGCC TTTTTATTGGATGGA TERM 3319 2517709 - 2517693 - f 79 -2.9 -5.42862 | opp_overlap 2517694, overlap 2517694 ACAGGTGTAAAAAAA CTCAGCT ATA AGCCGAT CAATTTGTTGAAGTT TERM 3320 2517815 - 2517788 - f 100 -17.8 -3.85389 | CGCCAACAACGGAAA GGCCCAGAAGGC GGCA ACCTTCTGGGCC CACAAAAACACTGGC TERM 3321 2518179 - 2518196 + F 100 -9.8 -4.88918 | opp_overlap 2518174 2518179 GCTTAACTAACCCAA CCCGGC CACAGT GCCGGG TTTTCTTTGCCCTAC TERM 3322 2518196 - 2518179 - f 71 -9.8 -3.23899 | opp_overlap 2518179, overlap 2518174 GCTTAACTAACCCAA CCCGGC CACAGT GCCGGG TTTTCTTTGCCCTAC SPA2415 2518781 - 2519083 + | hypothetical protein sieB 2519683 - 2519096 - | superinfection exclusion SPA2417 2519827 - 2519913 + | hypothetical protein TERM 3323 2519898 - 2519934 + G 85 -9 -4.4009 | gap 1, opp_overlap 2519901, overlap 2519899 CCAGGACTACCCATA TGACTACGACTATTGAT ACAA ATCAATGGT-GTAGTCG TTTTGTGAAATGCAA TERM 3324 2519899 - 2519933 + G 71 -10.3 -3.23733 | gap 1, opp_overlap 2519901, overlap 2519898 CAGGACTACCCATAT GACTACGACTATTGAT ACAA ATCAATGGT-GTAGTC GTTTTGTGAAATGCA ral 2519897 - 2520091 + | antirestriction protein SPA2419 2520128 - 2520421 + | hypothetical protein TERM 3325 2520647 - 2520667 + F 88 -7.5 -5.0538 | CCCTTGATGTTATTT GCCGCTC GCAGTCA GGGCGGC TTTTTTCGCATACCA SPA2420 2520736 - 2520888 + | hypothetical protein kil 2520869 - 2521057 + | hypothetical protein TERM 3326 2521045 - 2521057 + F 72 -6.3 -4.30576 | AGACTGGGAGAAGCG TCATG TTG CATGA TTTTGATGATGACGA SPA2422 2521047 - 2521190 + | hypothetical protein SPA2423 2521316 - 2521894 + | hypothetical protein abc1 2521894 - 2522178 + | hypothetical protein abc2 2522225 - 2522518 + | hypothetical protein SPA2426 2522529 - 2522699 + | hypothetical protein SPA2427 2523352 - 2523852 + | hypothetical protein eaa1 2524618 - 2525703 + | hypothetical protein SPA2429 2525624 - 2525980 + | hypothetical protein TERM 3327 2525984 - 2526001 + F 86 -4.7 -5.58454 | opp_overlap 2525985, overlap 2525985 GGCAATGAATAACAA ACCTCGC ACTC GCGGGGA TTTTTTTCATATGAA TERM 3328 2526000 - 2525985 - f 72 -6 -4.51994 | opp_overlap 2525985 2525984 GCAATGAATAACAAA CCTCGC ACTC GCGGGG ATTTTTTTCATATGA TERM 3329 2525985 - 2526000 + F 74 -8.2 -3.93988 | opp_overlap 2525985, overlap 2525984 GCAATGAATAACAAA CCTCGC ACTC GCGGGG ATTTTTTTCATATGA TERM 3330 2526017 - 2526030 + F 82 -5.9 -5.18371 | opp_overlap 2526017 TTTTTTTCATATGAA CTCGC TACG GCGGG TTTTGTTTTATGGAG xis 2526192 - 2526542 + | excisionase int 2526419 - 2527582 + | integrase proA 2529038 - 2527788 - | gamma-glutamyl phosphate reductase proB 2530153 - 2529050 - | gamma-glutamyl kinase TERM 3331 2529901 - 2529884 - G 71 -6.3 -4.35926 | ACCGTAAATTGAAAA CAACTGC TCCC ACAGTTG AATCAGGCGGCTTTG phoE 2530436 - 2531488 + | outer membrane phosphoporin protein E crl 2531940 - 2531539 - | DNA-binding transcriptional regulator Crl frsA 2533242 - 2531998 - | fermentation/respiration switch protein TERM 3332 2532724 - 2532694 - G 70 -3 -4.70659 | overlap 2532695 CGGCATATGTAAAAA CGCGGTGACAGGCG AAC CGCCAGGAACGGCA AATTCCATTTCACGT TERM 3333 2533316 - 2533292 - R 100 -17.1 -4.78572 | overlap 2533294 TTGTAACCAATAAAA CAGCGCCCGGC ATT GCCGGGCGCTC TGAAAAGCTGCTGAT TERM 3334 2533314 - 2533294 - R 100 -19.7 -4.00694 | overlap 2533292 GTAACCAATAAAACA GCGCCCGGC ATT GCCGGGCGC TCTGAAAAGCTGCTG gpt 2533789 - 2533331 - | xanthine-guanine phosphoribosyltransferase TERM 3335 2533444 - 2533426 - G 73 -10.2 -3.33003 | opp_overlap 2533426, overlap 2533419 TAACATAATCATCAA CCAGCGGA CGG CCCGCCGG TTTAGCGAAAATCGT TERM 3336 2534057 - 2534080 + G 83 -7.6 -4.57837 | gap 1 CTGAACTGTCTCAGT TATCACCACAA CCT TTGTGG-GATA TTTTTGCCAAAATCT TERM 3337 2534314 - 2534289 - g 81 -2.5 -5.40072 | GGTGCCGCAAAAAAA TAGCGACACCG TTCA CGACTTCACTA CAGATCCCATCCGGC pepD 2534038 - 2535495 + | aminoacyl-histidine dipeptidase precursor TERM 3338 2535533 - 2535509 - T 76 -8.5 -4.18763 | overlap 2535510 AAGAAAGCGCTAAAA TGCCCGTCC CATTTCT GGACGGGCT ATCAATATGGAATAT TERM 3339 2535532 - 2535510 - T 78 -12 -3.10173 | overlap 2535509 AGAAAGCGCTAAAAT GCCCGTCC CATTTCT GGACGGGC TATCAATATGGAATA prfH 2536264 - 2535650 - | peptide chain release factor-like protein SPA2441 2537400 - 2536261 - | hypothetical protein TERM 3340 2536904 - 2536919 + g 79 -3.2 -5.24129 | overlap 2536905 GAACCACTGTGTACC AGCAGT AATA ACTGCG TTTTTTGTAACCCCG TERM 3341 2537244 - 2537224 - G 74 -3.2 -4.85599 | gap 1 TCCACGTGAGAAAAA GGCTGCGCC AATA GG-GTAGCC GCGCCCCGGATGCAG dinP 2538674 - 2537619 - | DNA polymerase IV TERM 3342 2538925 - 2538938 + G 91 -3.8 -5.46657 | opp_overlap 2538934, overlap 2538934 AAGGAACAAGCAGTA TGCG TAAAAT CGCA TTTTTTCTTGCGATG yafK 2538924 - 2539664 + | hypothetical protein yafJ 2540402 - 2539635 - | hypothetical protein TERM 3343 2539675 - 2539696 + g 73 -8.7 -3.91798 | AATAACGCCCATTCG CCTGGCATA ATCT TTTGCCAGG TTTCATTCCCCGTTA gmhA 2541144 - 2540566 - | phosphoheptose isomerase TERM 3344 2541567 - 2541597 + G 81 -12.6 -3.03159 | overlap 2541591 CCGTTTAACCTCACA CCGATGCGAAAATC AAT GATTTCCGCACCGG TGTTCCGCGGCTTCC TERM 3345 2542135 - 2542155 + G 70 -8.9 -3.64822 | GTTCTGATGCAGGCG CCATTCCGG ATA CCGGCGTGG TTTGCATGGGCGAAT fadE 2541384 - 2543828 + | acyl-CoA dehydrogenase TERM 3346 2543848 - 2543865 + F 100 -14.1 -5.08088 | TCTCGCCTCTTTCCT GCCCCGC TTTC GCGGGGC TTTTTCTTGCCGCTT yafV 2543937 - 2544704 + | hypothetical protein TERM 3347 2544706 - 2544733 + F 79 -9.9 -3.66999 | gap 1, opp_overlap 2544709, overlap 2544708 2544709 CATTCACCTTGTAAG CAA-CCTGCCGC TCACC GCGGCGGGATTG TTTCACTCCGTAACT TERM 3348 2544708 - 2544730 + F 74 -8.3 -3.9693 | opp_overlap 2544709, overlap 2544706 2544709 TTCACCTTGTAAGCA ACCTGCCGC TCACC GCGGCGGGA TTGTTTCACTCCGTA TERM 3349 2544729 - 2544709 - f 73 -9.6 -3.34344 | opp_overlap 2544709 2544708 2544706 TCACCTTGTAAGCAA CCTGCCGC TCACC GCGGCGGG ATTGTTTCACTCCGT TERM 3350 2544709 - 2544729 + F 78 -11.8 -2.97676 | opp_overlap 2544709, overlap 2544708 2544706 TCACCTTGTAAGCAA CCTGCCGC TCACC GCGGCGGG ATTGTTTCACTCCGT SPA2448 2545075 - 2545482 + | hypothetical protein TERM 3351 2545491 - 2545514 + F 95 -11.8 -3.87815 | TGAGTAAATATTTTT GCCCGTTATT CCTG GATAACGGGC TTTATCCAGGTCGGG TERM 3352 2546456 - 2546442 - g 76 -2.8 -5.06451 | GAGCATTTCAAAAAA TCACTA TGC TGGTGA TGAACATACCGCTTA SPA2449 2545813 - 2546532 + | outer membrane adhesin TERM 3353 2546909 - 2546888 - T 71 -10.1 -3.21099 | overlap 2546889 CCGTTGGAGCAGGAA CCCACGCCC TTCA GGACGTGGA GGATGTCAATGCACA TERM 3354 2546908 - 2546889 - T 73 -11.4 -2.52516 | overlap 2546888 CGTTGGAGCAGGAAC CCACGCCC TTCA GGACGTGG AGGATGTCAATGCAC TERM 3355 2547213 - 2547175 - T 76 -7.6 -4.20868 | overlap 2547176 TGCGTAAAACAAGAA CCACACTCATATTAATAA TGA TTAGTAATGTGAGTGTGC GTATAACGAGATACA TERM 3356 2547212 - 2547176 - T 75 -11.1 -3.11798 | overlap 2547175 GCGTAAAACAAGAAC CACACTCATATTAATAA TGA TTAGTAATGTGAGTGTG CGTATAACGAGATAC TERM 3357 2547395 - 2547408 + T 70 -5.3 -4.37506 | GCCTCCCCACCGCAC GAACA ATGA TGTTC TTTATATTTAATCGT TERM 3358 2547554 - 2547541 - T 89 -4.5 -5.63517 | overlap 2547542 TCCCGAAAGAAAAAA CCGTC ATAT GACGA TGGCCATTGCATTCC tinR 2548707 - 2548252 - | transcriptional regulator tcfD 2549919 - 2548840 - | putative fimbrail protein TERM 3359 2549558 - 2549570 + g 79 -7.7 -4.38927 | AGTATGAGCGTGATT TCAGC ATG GCTGA TTTGTTCTCTGAAAC tcfC 2552629 - 2549942 - | outermembrane fimbrial usher protein tcfB 2553313 - 2552738 - | putative fimbrial subunit TERM 3360 2553225 - 2553208 - G 81 -6.9 -4.80417 | overlap 2553210 CAGAAAAAGAATAAA CGGTGGC CAAT GCCACAG CTGCGGCAATAAAAG TERM 3361 2553346 - 2553360 + r 76 -4.2 -4.98531 | AAATGTAGGGTATAG CGTACG CTC CGTGTG TTTTTACTTTCCGGC tcfA 2554074 - 2553364 - | putative fimbrial protein TERM 3362 2554481 - 2554467 - H 72 -5.6 -4.51765 | overlap 2554468 GAGAATCTAAAGAAA GCCCTC CAG GAGGGA GATACAATTCAGACT TERM 3363 2554480 - 2554468 - H 70 -9.1 -3.29975 | overlap 2554467 AGAATCTAAAGAAAG CCCTC CAG GAGGG AGATACAATTCAGAC TERM 3364 2555244 - 2555202 - H 70 -4.7 -4.4009 | gap 1, opp_overlap 2555235, overlap 2555204 CCGGAGTGGAGAAAA CCCACCT-AGCCGCTGCCCC CGGT GTGAAAGCGGCAGATGTGGG CCATCGGGTGTTGTT SPA2456 2555289 - 2555666 + | hypothetical protein SPA2457 2555892 - 2555725 - | hypothetical protein TERM 3365 2555811 - 2555796 - G 73 -9 -3.85698 | TGGTGGCTTCAGAAA TACCGG CCTC CCGGTA GACATCTTTAACAAT SPA2458 2556092 - 2555967 - | hypothetical protein TERM 3366 2556137 - 2556117 - R 73 -7.6 -4.11216 | gap 1, opp_overlap 2556104 2556101, overlap 2556119 TGGGCATCGTCAAAA GACGACTGG CTGA CCAGTCG-C ATATCTCGATGCCTC TERM 3367 2556136 - 2556119 - R 82 -11.3 -3.65542 | opp_overlap 2556104 2556101, overlap 2556117 GGCATCGTCAAAAGA CGACTGG CTGA CCAGTCG CATATCTCGATGCCT sinR 2557156 - 2556212 - | LysR family transcriptional regulator SinR SPA2460 2558797 - 2557976 - | ybeJ-like protein TERM 3368 2558925 - 2558913 - R 78 -6.3 -4.65722 | opp_overlap 2558912, overlap 2558924 TGACAGATAAACAAA CCTTA TAC TAAGG GCTTATAAAGCCCCG TERM 3369 2558938 - 2558924 - R 71 -10 -3.28708 | opp_overlap 2558912, overlap 2558913 CAAACCTTATACTAA GGGCTT ATA AAGCCC CGCTCACAAAAGAGT safC 2562207 - 2559697 - | outer-membrane fimbrial usher protein safB 2562971 - 2562231 - | periplasmic fimbrial chaperone protein TERM 3370 2563003 - 2563035 + r 95 -12.9 -4.08853 | overlap 2563004 AAATGTATGACTTGA TATTTATTGCGCCTT AAT AAGGCGCAATAAAAG TTGTTTACTATTAAG TERM 3371 2563004 - 2563034 + r 85 -14.2 -3.04589 | overlap 2563003 AATGTATGACTTGAT ATTTATTGCGCCTT AAT AAGGCGCAATAAAA GTTGTTTACTATTAA safA 2564166 - 2563672 - | lipoprotein SPA2465 2565227 - 2564946 - | hypothetical protein SPA2466 2565650 - 2565453 - | hypothetical protein TERM 3372 2565569 - 2565554 - G 73 -9 -3.85698 | TGGTGGCTTCAGAAA TACCGG CCTC CCGGTA GACATCTTTAACAGT SPA2467 2565703 - 2566017 + | hypothetical protein TERM 3373 2566051 - 2566027 - T 79 -4.2 -5.21236 | AATTGATAATAAAAA GCCGGAAAAA GATAA CCCCTCCGGC TTTTACATATTATCC TERM 3374 2566066 - 2566081 + T 72 -3.2 -4.9138 | CTTTTACATATTATC CATCCG GCTC CAGATG TTTTATTTCAATCCT TERM 3375 2567112 - 2567087 - T 89 -5.5 -5.7946 | gap 1, opp_overlap 2567086 2567087 GGGTTAATAAAAAAA CCGGG-AAGA GTTAATT TCTTTCCCGG CTTTATATTACTACT SPA2469 2569097 - 2568786 - | hypothetical protein SPA2470 2571960 - 2569117 - | Rhs-family protein TERM 3376 2570344 - 2570356 + g 71 -4.7 -4.57569 | opp_overlap 2570331 2570332, overlap 2570345 ATCCGTCACCCCCTG CCGGC TGT GCCGC TTTTTCAGCAACTCG TERM 3377 2570753 - 2570780 + g 71 -9.9 -3.53091 | overlap 2570767 TCCGGCTCTCCGCCT TCCGCCGCA TCATGCCGCC TGCGGCGGA TTTCCAGCAGACGGT TERM 3378 2570946 - 2570975 + g 76 -12.1 -3.10344 | gap 1 TCAGCGCGTTATACC CGTATGCCCGGCGG CTG CCGCCGGG-GTCCG TCTGTTCCGTCAACC SPA2471 2576609 - 2574363 - | hypothetical protein TERM 3379 2574629 - 2574640 + g 72 -2.2 -4.93877 | GATATAACTCTTTTA CCGT CTGA ATGG TTTTATTTCCTCCGG TERM 3380 2574966 - 2574984 + g 73 -5.3 -4.62069 | gap 1 ACGCCCCACGATGAT CGGCAGAT CCGG ATC-GCCG TTTTTGAAATCCACC TERM 3381 2575075 - 2575086 + g 71 -5.8 -4.34771 | TAGCTGACGCGTATC CAGC AGGA GCTG TTTTCATCCATTTTG SPA2472 2577102 - 2576641 - | hypothetical protein TERM 3382 2577137 - 2577125 - R 89 -6.3 -5.42198 | opp_overlap 2577125 GGGTAAAAAAGAAAA TGATG TTC CATCA TTAGTTATGATTCTT SPA2473 2577847 - 2577104 - | hypothetical protein TERM 3383 2577415 - 2577400 - G 81 -4 -5.2197 | GATAAAAACCAAAAA GATCTG AAAC CAAATC TTCACCACTAAATCC SPA2474 2578393 - 2577932 - | hypothetical protein TERM 3384 2577975 - 2577993 + g 89 -3.1 -5.73672 | CGTTGCACCACTTCA CTGGC AAATGTCGC GCCAG TTTTTTTCATTATTT TERM 3385 2578224 - 2578213 - G 77 -3.6 -5.07486 | CACCGTCAACAAAAA CGCC ATCC AGCG ATAAATCATATTTTT SPA2475 2578848 - 2578378 - | hypothetical protein SPA2476 2579425 - 2578952 - | hypothetical protein TERM 3386 2578995 - 2579013 + g 89 -3.1 -5.73672 | CGCTGTACCACTTCA CTGGC AAATGTCGC GCCAG TTTTTTTCATTATTT TERM 3387 2579640 - 2579615 - R 100 -10.5 -5.15969 | opp_overlap 2579614 GCGCAATTTAAAAAA GACGTATAGGT GGCA ACCCACACGTC GTGACTTCCCTGAGG SPA2478 2580689 - 2579922 - | hypothetical protein SPA2479 2584549 - 2580689 - | putative inner membrane protein TERM 3388 2581199 - 2581231 + g 83 -10.6 -4.00042 | gap 2, overlap 2581199 CGGTTTGTAGCGCCA C-GGGTC-GCTGGCGG TGT CCGCCAGCGGAGCCAG TTGTTTGCTCCAGAA TERM 3389 2581393 - 2581406 + g 74 -9.5 -3.68023 | opp_overlap 2581392, overlap 2581389 GGGTGTTCAGCACAT CGCCG GTCC CGGCG TTGATTTTGCGCGTT TERM 3390 2581540 - 2581507 - G 100 -18.1 -3.14132 | TGTCTGCGGCAGTAA TGCGCGCTGGCAACG TCCC CGCCGCCAGCGCGCT ATCAGCAATGGTCAG TERM 3391 2582048 - 2582060 + g 80 -4.8 -5.06451 | overlap 2582036 TATCTGGCTGCGCAG GCTG TCAGT CAGC TTTTTTGGCGTACTC TERM 3392 2583105 - 2583117 + g 81 -6.9 -4.82901 | opp_overlap 2583095, overlap 2583106 AGAGAGGCGGATGAT TCGCC ACG GGCGG TTTTTATCGCCCGGA TERM 3393 2583322 - 2583333 + g 74 -7.2 -4.15833 | opp_overlap 2583322, overlap 2583320 2583330 GCGGGAAGGTATACA GCCG CTGG CGGC TTTTAAGGTCGTACT TERM 3394 2583413 - 2583445 + g 100 -13.3 -4.13945 | CGCCAGCTCCTGCGC GCAGGCGGCGTGCAG CGC CTGCGGGTCGCCCGC TTTTCGCCTGCGGCT SPA2480 2585014 - 2584583 - | putative shiga-like toxin A subunit SPA2481 2585989 - 2585216 - | hypothetical protein TERM 3395 2585534 - 2585552 + g 70 -3 -4.68994 | overlap 2585535 2585536 TTTTACGGAGGGTTC AGTCCCCT GAC AGGGGAAA TTTTTAACTAATGCT SPA2482 2587298 - 2585994 - | hypothetical protein TERM 3396 2586240 - 2586260 + g 71 -6.1 -4.258 | gap 1, overlap 2586233 2586232 2586236 GACTGCGCCGCCCAC GCGG-GCG ATTTCC CGCGCCGC TTTGTTAATCACTGG TERM 3397 2587266 - 2587254 - G 86 -7.7 -4.82901 | overlap 2587262 CGTGGTGGACAAAAA GGACA TCA TGTCC GCCGCTGGCGGCGTC SPA2483 2588638 - 2587295 - | hypothetical protein SPA2484 2589178 - 2588642 - | lipoprotein TERM 3398 2588741 - 2588757 + g 75 -6.5 -4.4715 | overlap 2588743 GCTGTACCAGGCTTT TTCCGGG GCT TCCGGGA TTTTGTAGGTTACCC TERM 3399 2588837 - 2588851 + g 89 -2.7 -5.47159 | CGTGGTCTGCGCATT CAGCG GGCGA CGCAG TTTTTTCTCTTCGCC TERM 3400 2589234 - 2589210 - R 100 -10.7 -5.10656 | ATCAAAACAATAAAA CCAGCCAGACA TAA CATCTGGCCGG AAAAATAGCCGTTAA SPA2485 2589731 - 2589246 - | hypothetical protein TERM 3401 2589730 - 2589719 - G 77 -4.4 -4.8543 | opp_overlap 2589719 CAATTTTCAGAAAAA TGTC ATAA GACA TATCTACTATCCTTT SPA2486 2590257 - 2589874 - | putative periplasmic protein SPA2487 2590727 - 2590242 - | putative cytoplasmic protein SPA2488 2590954 - 2590838 - | hypothetical protein TERM 3402 2591010 - 2590985 - R 100 -17.7 -4.71463 | AATCAAAACAATAAA TCCGGCCAGAT ATAA ATCTGGCCGGA AAAACAACCGTTAAA SPA2489 2591506 - 2591021 - | hypothetical protein TERM 3403 2591139 - 2591151 + g 70 -9.1 -3.71213 | opp_overlap 2591126, overlap 2591141 GAGAGCTCAATCCGC TCGCG AGA CGCGA TTTCGCCTTCTCTGT SPA2490 2592090 - 2591758 - | putative cytoplasmic protein SPA2491 2592342 - 2592217 - | hypothetical protein SPA2492 2594178 - 2592670 - | hypothetical protein SPA2493 2594744 - 2594202 - | hypothetical protein TERM 3404 2594820 - 2594845 + r 72 -2.6 -5.06089 | TTTAAAAATCATACT CAGAGAGTTT TTTTAT AATCTCTTTG TTTTGTTTGTACTTT SPA2494 2595096 - 2594806 - | hypothetical protein TERM 3405 2594902 - 2594913 + g 74 -2.2 -5.1104 | CGCCGGAGGACACCA GGTA TTAA TGCC TTTTTCTATGTCTTT SPA2495 2595197 - 2595099 - | hypothetical protein SPA2496 2597845 - 2595182 - | ClpB-like protein TERM 3406 2598056 - 2598044 - H 72 -4.9 -4.56736 | ATTTAAGAATTAAAA GAAAT AAT ATTTC AAAAAAGACATCTAT TERM 3407 2598131 - 2598109 - H 100 -8.4 -5.4593 | opp_overlap 2598107 CGAAAATAATAAAAA GGGTGTCATC AAT AATGACCCCC TATGAATTTAGTTAA SPA2497 2598133 - 2598204 + | hypothetical protein SPA2499 2599102 - 2599926 + | hypothetical protein TERM 3408 2600116 - 2600174 + G 80 -9.4 -4.12532 | gap 1, opp_overlap 2600098, overlap 2600154 ACATCGACGCCCGGC GCTATCCGCAGGCGGCGGC-GTCAGTG CTCAAC TATGGCCTGCCGCCGCTGGCGGGCAGC TTTATGTATGAGCAC SPA2500 2599923 - 2600417 + | hypothetical protein SPA2501 2600433 - 2602316 + | hypothetical protein SPA2502 2602313 - 2603308 + | hypothetical protein TERM 3409 2603963 - 2603974 + G 71 -4.4 -4.58395 | TGAGACATTAGGCGA TCTG GCTC CAGA TTTTTCACGCCTGCG SPA2503 2603319 - 2604362 + | putative cytoplasmic protein TERM 3410 2604611 - 2604635 + T 100 -8.6 -5.95166 | opp_overlap 2604611 GAAGACGAAAAAAAA CCGTATCCCT TTTAC AGTGATACGG TTTTTTTTACTTCAC TERM 3411 2604635 - 2604611 - T 100 -8.6 -5.94597 | opp_overlap 2604611 GAAGACGAAAAAAAA CCGTATCCCT TTTAC AGTGATACGG TTTTTTTTACTTCAC TERM 3412 2604799 - 2604818 + T 71 -3.4 -4.90296 | overlap 2604795 CGAATATTACGGTTT GCGGTGTC GCCC GTCAACGC TTTTTCTCACCTTTT dnaQ 2605624 - 2604893 - | DNA polymerase III subunit epsilon rnhA 2605688 - 2606155 + | ribonuclease H yafS 2606874 - 2606152 - | hypothetical protein TERM 3413 2607283 - 2607295 + G 75 -6.9 -4.38154 | CCCTTACTTATTCTG CGGCG ACA CGCTG TTTTCTGGCGGCTGT gloB 2606909 - 2607664 + | hydroxyacylglutathione hydrolase TERM 3414 2608500 - 2608473 - g 71 -4.2 -4.64657 | gap 1, overlap 2608445 2608475 2608480 TGAAATTCTCAAAAA CAGCAAACGCTAC GGC GTA-CGTCTGCCA ACAACAGATGAAAGC TERM 3415 2608526 - 2608475 - g 71 -7.2 -3.9318 | gap 1, overlap 2608445 2608473 2608480 2608515 AAATTCTCAAAAACA GCAAACGCTACGGCGTACGTCTGCC AAC AACAGATGAAAGCCG-AGCGCTGGC ACGAGTTCGTTTAAA TERM 3416 2608521 - 2608480 - g 70 -6.5 -4.13748 | gap 1, overlap 2608473 2608475 2608515 CTCAAAAACAGCAAA CGCTACGGCGTACGTCTGCC AAC AACAGATGAAAGCCG-AGCG CTGGCACGAGTTCGT mltD 2607736 - 2609103 + | membrane-bound lytic murein transglycosylase D TERM 3417 2609155 - 2609121 - T 84 -8.6 -4.72272 | opp_overlap 2609128, overlap 2609122 2609123 2609128 TTGTCCGACGAAAAA GCCAAAAGGCGCCG CTTCCCC CGGCGCCTTTTAAA TTGCTATACCGCTTT TERM 3418 2609154 - 2609122 - T 82 -12.1 -3.43042 | opp_overlap 2609128, overlap 2609121 2609123 2609128 TGTCCGACGAAAAAG CCAAAAGGCGCCG CTTCCCC CGGCGCCTTTTAA ATTGCTATACCGCTT TERM 3419 2609153 - 2609123 - T 81 -13.4 -2.65504 | opp_overlap 2609128, overlap 2609122 2609121 2609128 GTCCGACGAAAAAGC CAAAAGGCGCCG CTTCCCC CGGCGCCTTTTA AATTGCTATACCGCT TERM 3420 2609128 - 2609148 + T 91 -11.1 -4.31085 | opp_overlap 2609123 2609122 2609121 2609128 ACGAAAAAGCCAAAA GGCGCCG CTTCCCC CGGCGCC TTTTAAATTGCTATA TERM 3421 2609148 - 2609128 - T 95 -11.1 -4.49644 | opp_overlap 2609128, overlap 2609123 2609122 2609121 ACGAAAAAGCCAAAA GGCGCCG CTTCCCC CGGCGCC TTTTAAATTGCTATA yafE 2609929 - 2609159 - | putative methyltransferase TERM 3422 2609985 - 2609961 - R 76 -7.7 -4.28487 | opp_overlap 2609984 TATGAGAAAAGTAAA GGGCAGCACCC GCA GAGGCCTGCCC CACGGCAGACCTGAC yafD 2610786 - 2610007 - | hypothetical protein TERM 3423 2610837 - 2610856 + r 77 -9.3 -4.00486 | opp_overlap 2610840 CCTCTGTAACGTCAA CCAGTCC TCAACC GGACTGG TTCTTCTGTTATAGG SPA2512 2612114 - 2610939 - | putative drug efflux protein TERM 3424 2613119 - 2613102 - g 76 -9.1 -3.97043 | GCGAATATATAAGAA CAGCCCC CGCA GGAGCTG TGAAAGAGGGGTAAA yafC 2612219 - 2613133 + | transcriptional regulator dkgB 2613958 - 2613155 - | 2,5-diketo-D-gluconate reductase B TERM 3425 2614089 - 2614114 + r 83 -13.3 -3.18264 | opp_overlap 2614091, overlap 2614091 TGACATGCAAAGAAA AAGCCCTGAGC TAAT GCTCAGGGCTC TTAATAAGTGGCGGA TERM 3426 2614091 - 2614112 + r 100 -15.9 -3.1552 | opp_overlap 2614091, overlap 2614089 ACATGCAAAGAAAAA GCCCTGAGC TAAT GCTCAGGGC TCTTAATAAGTGGCG TERM 3427 2614112 - 2614091 - R 100 -15.9 -5.31519 | opp_overlap 2614091 2614089 ACATGCAAAGAAAAA GCCCTGAGC TAAT GCTCAGGGC TCTTAATAAGTGGCG TERM 3428 2617115 - 2617127 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3429 2617669 - 2617693 + r 71 -8 -3.93061 | gap 1, opp_overlap 2617667 2617675, overlap 2617671 2617672 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT SPA2518 2617788 - 2617696 - | hypothetical protein TERM 3430 2617768 - 2617733 - G 76 -9.2 -4.00532 | opp_overlap 2617735 2617744 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA TTAAAGCAGGTGACT TERM 3431 2619680 - 2619705 + r 72 -4.7 -4.65895 | gap 1, overlap 2619674 2619686 TCAGCTCACCGTCGC GAGGTG-GCGTA TAT TACGCTTTCCTC TTTTTGAGTCAAGCC TERM 3432 2619686 - 2619698 + r 73 -7.7 -4.13748 | overlap 2619674 2619680 CACCGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTTTGAG TERM 3433 2619924 - 2619941 + r 84 -8.3 -4.6971 | opp_overlap 2619924 GTTTTTAAACAAAAA CGAGCCC GTCA GGGCCCG TTTTATTCAAATTTG TERM 3434 2619941 - 2619924 - R 100 -10.5 -5.27335 | opp_overlap 2619924 GTTTTTAAACAAAAA CGAGCCC GTCA GGGCCCG TTTTATTCAAATTTG clpB 2622534 - 2619961 - | protein disaggregation chaperone yfiH 2623395 - 2622664 - | hypothetical protein TERM 3435 2622868 - 2622850 - G 71 -4.5 -4.56597 | opp_overlap 2622850 CCCGTGCGGCAAAAA TGCGCTA TCGGC TTGCGCA TCTTTTGCTAAAAAT TERM 3436 2622893 - 2622883 - G 78 -6.8 -4.56775 | ATCTTTTGCTAAAAA TGCG TCA CGCA CTTCCGGCCCCACTT rluD 2624372 - 2623392 - | 23S rRNA pseudouridine synthase D TERM 3437 2624404 - 2624414 + H 74 -8.2 -3.8766 | TAACGTTGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC yfiO 2624504 - 2625241 + | outer membrane protein assembly complex subunit YfiO TERM 3438 2625286 - 2625257 - f 93 -15.1 -2.8917 | opp_overlap 2625262, overlap 2625262 AGCAATACCAACAAG CAAAACGGCAGCC TTCC GGCTGCCGTTTTT TTATTCGATATCTGA TERM 3439 2625262 - 2625281 + F 100 -15 -5.8187 | opp_overlap 2625257 2625262 TACCAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGATA TERM 3440 2625281 - 2625262 - f 100 -15 -4.5774 | opp_overlap 2625262, overlap 2625257 TACCAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGATA TERM 3441 2625449 - 2625434 - f 72 -6.2 -4.35693 | opp_overlap 2625433 AAAGTGACAAAATAA TGTGAT TTAC ATCACA CATTTTGACATTAAG yfiA 2625513 - 2625851 + | translation inhibitor protein RaiA TERM 3442 2625877 - 2625892 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGG TERM 3443 2626051 - 2626071 + F 100 -14 -5.5112 | opp_overlap 2626051 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3444 2626071 - 2626051 - f 100 -14 -4.03167 | opp_overlap 2626051 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3445 2626848 - 2626822 - g 71 -4.3 -4.67353 | overlap 2626824 2626836 2626837 GCAGCGATGGAAAAA GTCGCGCAG GCAAACTCT CCGCGCGTC GCGGCGCTCGGCAGC pheA 2626102 - 2627262 + | bifunctional chorismate mutase/prephenate dehydratase SPA2527 2628131 - 2627223 - | hypothetical protein TERM 3446 2627432 - 2627448 + g 76 -12.3 -3.0497 | opp_overlap 2627431 2627432 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3447 2627448 - 2627432 - G 72 -12.3 -2.57564 | opp_overlap 2627432, overlap 2627431 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3448 2627489 - 2627479 - G 71 -8.2 -3.85698 | overlap 2627480 CCTTGCGGTGAGAAA CGCG CCA CGCG CCAGCCGTCAAACAT TERM 3449 2627814 - 2627803 - G 72 -3.6 -4.82901 | GTTCCGGCATAAAAA CGGC CATC GCCA TCAGTGCCGCCATCG TERM 3450 2627957 - 2627934 - G 77 -7.4 -4.31433 | overlap 2627936 CATGGCCACAATAAA TCCGCCCTGC TCAC GCAAGGCAAA ACAGCCTACCTCTTC TERM 3451 2628154 - 2628168 + r 91 -11.4 -4.36262 | opp_overlap 2628154 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT TERM 3452 2628168 - 2628154 - R 100 -11.4 -5.37593 | opp_overlap 2628154 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT tyrA 2629310 - 2628189 - | bifunctional chorismate mutase/prephenate dehydrogenase aroF 2630390 - 2629320 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3453 2630079 - 2630097 + g 77 -8.1 -4.11216 | gap 1 AATCAGCCCTTTCCA GCCGACGG TAGT CCG-CGGC TTTTCAAAATAGACG TERM 3454 2630244 - 2630226 - G 71 -10.2 -3.24925 | ACCGCATACCACCAA CAGACGCG GAT CGCGCCCG GCAATAATGTCAGAA TERM 3455 2630600 - 2630614 + H 83 -4.2 -5.43514 | opp_overlap 2630599 2630600 2630602, overlap 2630599 2630602 GAAAAGCGGTAAAAT GAGCGA TGC TCGCTA TTTTTTGATTATTTT TERM 3456 2630602 - 2630612 + H 74 -6.8 -4.30543 | opp_overlap 2630600 2630599 2630602, overlap 2630599 2630600 AAAGCGGTAAAATGA GCGA TGC TCGC TATTTTTTGATTATT yfiR 2630830 - 2631348 + | hypothetical protein yfiN 2631341 - 2632561 + | hypothetical protein TERM 3457 2632685 - 2632647 - T 73 -11.1 -2.56596 | opp_overlap 2632652 2632655, overlap 2632655 GCGTGGAGCAACCCA TAAAAAAAGGGGCCAGC GTAAT GCCAGCCCCTTCTTTTC TACAAGCTTTCGGAT TERM 3458 2632652 - 2632680 + T 70 -5.1 -4.39002 | opp_overlap 2632647 2632655, overlap 2632655 GAGCAACCCATAAAA AAAGGGGCCAGCG TAA TGCCAGCCCCTTC TTTTCTACAAGCTTT TERM 3459 2632677 - 2632655 - T 100 -10.5 -5.66684 | opp_overlap 2632655 2632652, overlap 2632647 CAACCCATAAAAAAA GGGGCCAGC GTAAT GCCAGCCCC TTCTTTTCTACAAGC TERM 3460 2632655 - 2632677 + T 74 -6.8 -4.30995 | opp_overlap 2632647 2632655, overlap 2632652 CAACCCATAAAAAAA GGGGCCAGCG TAA TGCCAGCCCC TTCTTTTCTACAAGC rplS 2633065 - 2632718 - | 50S ribosomal protein L19 trmD 2633873 - 2633106 - | tRNA (guanine-N(1)-)-methyltransferase rimM 2634466 - 2633918 - | 16S rRNA-processing protein rpsP 2634733 - 2634485 - | 30S ribosomal protein S16 TERM 3461 2634789 - 2634757 - R 84 -8.4 -4.63218 | gap 1, overlap 2634760 CTTGTGTGAATAAAA CAACCGGGCCCCATC GAGG AACGGAGCCCGGC-G TCATATTAAAAGCCC TERM 3462 2634787 - 2634760 - R 100 -13.4 -4.43307 | overlap 2634757 GTGTGAATAAAACAA CCGGGCCCCATC GAGG AACGGAGCCCGG CGTCATATTAAAAGC TERM 3463 2635009 - 2634988 - R 74 -11.5 -2.90813 | opp_overlap 2634979 2634980, overlap 2634971 2634985 CAGGCCGGGAAATTA GCGGCCAGG GAAG CCTGGCGGC ATCATCCCCTTCATA ffh 2636346 - 2634985 - | signal recognition particle protein TERM 3464 2636129 - 2636147 + g 74 -4.4 -4.72631 | opp_overlap 2636129, overlap 2636130 ACAATCTTGACGAAC TCCTGCCC TGG GGTCAGGC TTTTGTTAACTTCAT corE 2636512 - 2637303 + | hypothetical protein TERM 3465 2637495 - 2637485 - g 75 -4 -4.86033 | AAACGGGTAGAAAAA TTAC TGC GTAA ACCCGACCGACTGAT TERM 3466 2638388 - 2638357 - g 74 -7.2 -4.09685 | overlap 2638358 2638360 GGTCACGCCGCAAAA CGACGGTTCGGTCA TTAT TGACGGTACCGCCA ACGTCCGGGAAATCA corB 2637413 - 2638609 + | hypothetical protein SPA2539 2638739 - 2639344 + | hypothetical protein TERM 3467 2639347 - 2639384 + T 89 -11.1 -4.05026 | opp_overlap 2639355 TTTTTTAAGTTAGAC GTCAAGCAGGCCGCCCG AAAG CGGCCTGCCAGCATGAC TTATTTCGCTTTGGC TERM 3468 2639372 - 2639355 - T 71 -10.5 -2.74563 | opp_overlap 2639347 GTTAGACGTCAAGCA GGCCGCC CGAA AGCGGCC TGCCAGCATGACTTA grpE 2639975 - 2639385 - | heat shock protein GrpE TERM 3469 2639803 - 2639845 + g 79 -2.7 -5.14563 | gap 1, overlap 2639805 AACACGGTGTCGCGT TCGCGAGTCTGG-GCTTCTG CAAG CTGAACTTCCAGATTCGCAA TTTTTTCATCGCGCG TERM 3470 2639941 - 2639953 + g 72 -2.6 -4.84673 | overlap 2639930 ATTTCTTCCGGGGCT TGCC CCTCA GGCG TTTTCTGTTCTTTAC SPA2541 2640166 - 2639972 - | hypothetical protein TERM 3471 2640265 - 2640250 - gH 80 -4.6 -5.13473 | overlap 2640251 ATTACAGCTAAAAAA TGTGCC AACC GGCACG CTGGCGGAAATTGGT TERM 3472 2640264 - 2640251 - gH 72 -8.1 -3.66999 | overlap 2640250 TTACAGCTAAAAAAT GTGCC AACC GGCAC GCTGGCGGAAATTGG ppnK 2640098 - 2640976 + | inorganic polyphosphate/ATP-NAD kinase TERM 3473 2641620 - 2641608 - g 71 -10.5 -3.27617 | CAACAAAGCCAGGAA CGCGC CGC GCGCG CGGAACTGCTGCAAT TERM 3474 2642002 - 2641987 - g 79 -7.6 -4.42806 | GCATCGCTAAACAAA TTTCGC TGGC GCGAAA ACATCACGTCAGCCC recN 2641062 - 2642723 + | recombination and repair protein smpA 2642872 - 2643210 + | hypothetical protein yfjF 2643666 - 2643376 - | hypothetical protein TERM 3475 2643499 - 2643510 + g 77 -4.4 -4.85782 | TTTTACCGGACGACT GTAG ATAC CTAC TTTATTTTTCGCCAG yfjG 2644093 - 2643656 - | hypothetical protein smpB 2644281 - 2644763 + | SsrA-binding protein TERM 3476 2644776 - 2644806 + F 71 -9.8 -3.23492 | overlap 2644774 2644777 TAATAGACATTTTTT GTGACCAGCTTC TCAGTAT GAAGCTGGTCAA TATTCATATCTCATG TERM 3477 2644777 - 2644805 + F 80 -13.3 -2.53613 | overlap 2644776 2644774 AATAGACATTTTTTG TGACCAGCTTC TCAGTAT GAAGCTGGTCA ATATTCATATCTCAT TERM 3478 2645759 - 2645792 + G 72 -11 -3.01712 | overlap 2645771 GTGGGTACTGGCTGG CGCGGTGGCGGC TGGCGGCATT GCCGCTATCGCG TCTTCCGGCGGCGGC TERM 3479 2647158 - 2647148 - g 78 -6.8 -4.56597 | CGGGCTGTTGAAAAA TGGC GAT GCCA CAGATGATAACCGCC TERM 3480 2647664 - 2647648 - g 71 -5.7 -4.37092 | overlap 2647650 ACGCGCCGGATAAAA CTGCGCC TGC GGCACCG AACGGTCTTATCGTG TERM 3481 2647898 - 2647870 - g 80 -8.8 -4.08689 | gap 1, overlap 2647823 2647871 TAGCGAACAACGAAA GCGCCGCCGCGAC GGTC GTCGCGCCGG-AC AGTACCGCGCCAGAA TERM 3482 2649345 - 2649320 - g 74 -10.5 -3.61268 | gap 1, overlap 2649323 GAGCGAAGGGTTAAA CATCC-TGACGG CCA CCGCCACGGATG CCGCAGGCAATAGTA TERM 3483 2649482 - 2649440 - g 73 -10.7 -3.39595 | gap 1, opp_overlap 2649416, overlap 2649433 GCTAATCAGCGATAA CGTCGCGCCGATTATCGGCA ACAT CGGCAATAAT-GGCGCAACG AACGATACCACGCCG TERM 3484 2651490 - 2651476 - g 76 -12.8 -2.73875 | overlap 2651473 CGGCGGGCAATACCA GCGCGG TCT CCGCGC CGTGGACGATCGTAG TERM 3485 2654132 - 2654122 - g 72 -4 -4.77173 | TGCCGACAAAACAAA TTGA AGG TCAA CTCATTAACGTGACG TERM 3486 2654781 - 2654753 - g 87 -13.2 -3.21416 | gap 1, opp_overlap 2654776 CACCGCCATCACCAA CGCCAA-CGGCGT CAGT ACGCCGGTCGGCG CGGGCAGCGTGGATA TERM 3487 2655545 - 2655515 - g 71 -7.4 -3.93288 | CCTCACTGAAGTAAA CGGCGTGGCGATTG CGG CGACCGGCACGACG GAGGTAAACGGGCTG TERM 3488 2655627 - 2655614 - g 74 -9.5 -3.64487 | CTACACGCTGAAGAA CGGCG TCGG CGCCG ACAGCATTAAAACGC TERM 3489 2656530 - 2656517 - g 75 -6.7 -4.46615 | CAGTACCAACCAAAA CGATG TTCT CATCG GCTCCGCCTATGGCG SPA2548 2645382 - 2656856 + | large repetitive protein TERM 3490 2656889 - 2656864 - f 100 -16.9 -5.24129 | GCGGTTGATAAAAAA GCCCCGAACGC CACG ACGTTCGGGGC AACAAGCGGTGATAT SPA2549 2656921 - 2658330 + | putative type I secretion protein TERM 3491 2659328 - 2659308 - g 100 -7.5 -5.78622 | GCACTGCAAAAAAAA CTGGCTGTC CTC GCCAACCAG GCCGCCCACGAAGCG SPA2550 2658327 - 2660507 + | putative type I secretion protein, ATP-binding protein SPA2551 2660515 - 2661678 + | putative type I secretion protein TERM 3492 2661850 - 2661835 - f 79 -3.2 -5.4477 | overlap 2661837 AAAGCCGCAAAAAAA TAGTCG CAAA CGACGA AAACTACGCTTTAGC TERM 3493 2662149 - 2662120 - f 74 -3.5 -4.93877 | opp_overlap 2662123 2662124, overlap 2662123 2662124 CTCCACCAAATAAAA CAATGGGTTACGT GAAA ACGTAGCCCCTTT TTCTTTGGTAGTGGC TERM 3494 2662146 - 2662123 - f 72 -5.2 -4.56436 | opp_overlap 2662123 2662124, overlap 2662120 2662124 CACCAAATAAAACAA TGGGTTACGT GAAA ACGTAGCCCC TTTTTCTTTGGTAGT TERM 3495 2662123 - 2662146 + F 95 -7.4 -5.34309 | opp_overlap 2662123 2662120 2662124, overlap 2662124 CACCAAATAAAACAA TGGGTTACGT GAAA ACGTAGCCCC TTTTTCTTTGGTAGT TERM 3496 2662124 - 2662145 + F 86 -10.9 -3.78958 | opp_overlap 2662124 2662123 2662120, overlap 2662123 ACCAAATAAAACAAT GGGTTACGT GAAA ACGTAGCCC CTTTTTCTTTGGTAG SPA2554 2662208 - 2662585 + | hypothetical protein SPA2555 2662890 - 2662672 - | putative positive regulator of late gene transcription TERM 3497 2662912 - 2662956 + r 95 -11.2 -4.54553 | opp_overlap 2662915 TTTCTCCGCCGCCAT TAAGTTCTCAATAATGAT ACACAAGAA ATTATTATTGAGAACTTA TTTATTCTATTTCTA SPA2556 2664058 - 2662958 - | putative regulator of late gene expression TERM 3498 2663429 - 2663415 - G 71 -6.4 -4.28774 | TCAGCCAAGGTAAAA CGATGA CCG TCACCG GCTTTGCGCGTGATA TERM 3499 2663453 - 2663475 + g 79 -11.3 -3.7104 | gap 1, opp_overlap 2663452 2663453 CGTGATAGTGATAAC CGGC-AGCGG CTTG CCGCTCGCCG TTCTTCCCTGTCCCT SPA2557 2664540 - 2664055 - | putative phage tail protein SPA2558 2667320 - 2664540 - | hypothetical protein TERM 3500 2667026 - 2667041 + g 100 -5.4 -5.60993 | CACGCCACTGAGCTT CAAGCG CCTG CGTTTG TTTTTTTGTCGGGGA TERM 3501 2667293 - 2667306 + g 71 -8.1 -3.82824 | opp_overlap 2667293 2667290 CCGCCCCCAGAACTA CCTGC AGTC GCAGG TTATTATCACTCATC SPA2559 2667432 - 2667313 - | hypothetical protein TERM 3502 2667434 - 2667414 - G 80 -11.9 -3.42395 | overlap 2667412 GCGACCAGTGAAAGA TGGTGGCAA TGT CTGCCACCA GATCATCAACCGTCA SPA2560 2667749 - 2667447 - | putative phage tail protein TERM 3503 2667796 - 2667771 - R 77 -8.9 -3.90112 | overlap 2667773 2667774 TTCCTGTTAATGAAA TACTGGCGCGG CTGC CCGCGCCGTTA AGGTTAATCAGAGGC TERM 3504 2667793 - 2667773 - R 79 -10.4 -3.54146 | gap 1, overlap 2667771 2667774 CCTGTTAATGAAATA CTGGCGCGG CTGC CCGCGCC-G TTAAGGTTAATCAGA TERM 3505 2667793 - 2667774 - R 71 -10.6 -2.72166 | overlap 2667773 2667771 CTGTTAATGAAATAC TGGCGCGG CTGC CCGCGCCG TTAAGGTTAATCAGA SPA2561 2668319 - 2667804 - | major tail tube protein SPA2562 2669501 - 2668329 - | major tail sheath protein TERM 3506 2669551 - 2669563 + r 70 -9.1 -3.37755 | overlap 2669549 GTTCTGGTTGCCAGG CGTGC GGC GCACG TATTTCACGATGTGT pin 2669822 - 2669604 - | inversion of adjacent DNA; at locus of e14 element TERM 3507 2670527 - 2670512 - g 82 -5.4 -4.99435 | CGGAACAACCAAAAA TGACGT TTTT ACGCCA AGCGGCGCAGGGGCC sopE 2670036 - 2670758 + | invasion-associated secreted protein TERM 3508 2670939 - 2670901 - T 100 -9 -5.89827 | opp_overlap 2670907, overlap 2670927 AACCATCAAAAAAAA TAGCCATTGCTGCTATAT AAC ATATAGCAGCAGTCTCTA CTACATATCTATATT TERM 3509 2670907 - 2670933 + T 82 -13.2 -2.95774 | opp_overlap 2670901 2670927 CAAAAAAAATAGCCA TTGCTGCTATAT AAC ATATAGCAGCAG TCTCTACTACATATC SPA2565 2671363 - 2670956 - | putative phage tail fibre protein SPA2566 2672989 - 2671370 - | phage tail fiber protein SPA2567 2673591 - 2672986 - | putative phage tail protein SPA2568 2674492 - 2673584 - | phage baseplate assembly protein SPA2569 2674838 - 2674479 - | phage baseplate assembly protein SPA2570 2675413 - 2674835 - | putative phage baseplate assembly protein SPA2571 2675928 - 2675482 - | putative phage tail completion protein SPA2572 2676352 - 2675921 - | putative phage tail protein SPA2573 2676873 - 2676448 - | putative regulatory protein SPA2574 2677250 - 2676873 - | hypothetical protein nucD 2677725 - 2677255 - | putative lysozyme TERM 3510 2677733 - 2677696 - G 86 -12.8 -3.68886 | gap 1 ATGAAGCGACTGAAA TCCGGGCAGCG-TGGCT GCGAT AGCCAGCACTGCCCCGA CAAGGCAGCACTTAA nucE 2677960 - 2677745 - | secretion protein SPA2577 2678167 - 2677964 - | putative phage tail protein SPA2578 2678631 - 2678167 - | putative capsid completion protein TERM 3511 2678740 - 2678764 + r 79 -2.9 -5.42198 | overlap 2678742 TTAGCGGCTGTCATT GC-GCAGTCTG CGCTC CAG-CTGCTGC TTTTCTTTTTTCACA SPA2579 2679375 - 2678725 - | putative phage terminase SPA2580 2680443 - 2679379 - | putative major capsid protein TERM 3512 2680333 - 2680295 - G 100 -16.9 -3.73953 | gap 1, opp_overlap 2680303 ATCAGCGTCAGGAAA GCAGCAGACTGCTGGATG TGGT CTTCCAG-AGTCTGCTGC ACGGACGGCTCCACG SPA2581 2681293 - 2680460 - | putative capsid protein TERM 3513 2681860 - 2681840 - g 71 -6.2 -4.28375 | gap 1 CGAACAGATCGAAAA GC-TGGAAG AAGT CTTCCACGC CTCAATGTTCGACTA TERM 3514 2681929 - 2681951 + G 91 -7.6 -5.08255 | overlap 2681930 TCCGTAATCTGCTCA AGTCGCGCCA GAT TGGCGCCACG TTTTATTTTGCCCGT TERM 3515 2681930 - 2681950 + G 79 -11.1 -3.63868 | overlap 2681929 CCGTAATCTGCTCAA GTCGCGCCA GAT TGGCGCCAC GTTTTATTTTGCCCG TERM 3516 2682828 - 2682818 - g 81 -6.8 -4.7373 | TGACGCCATTAAAAA GCTG ACA CAGC AGTACAACGTGACCT TERM 3517 2682965 - 2682947 - g 87 -8.1 -4.66833 | CCCCAACGTCAAAAA CGCCCTG GTGCT CAAGGCG TACGACATTATCAGC SPA2582 2681436 - 2683202 + | terminase subunit TERM 3518 2683479 - 2683497 + G 86 -10.3 -4.17491 | overlap 2683493 CGTACATCCCGCACC GCCTGCT CAGCC AGCAGGC TTTTGCCCGTTTCGT SPA2583 2683202 - 2684245 + | capsid portal protein TERM 3519 2684289 - 2684259 - T 100 -15.6 -4.47328 | overlap 2684277 AATTTTATTATAAAA GATGGTGCCATCAT ATA ACGATGACACCATC GCCCCTAAAATTTAT SPA2584 2684989 - 2684294 - | hypothetical protein SPA2585 2686073 - 2685009 - | hypothetical protein TERM 3520 2685072 - 2685086 + g 73 -5 -4.62872 | overlap 2685073 ATTGAATCGCTCAGT TTCTCT ACC AGAGAG TTTTTGCGGCTTACT TERM 3521 2685836 - 2685847 + g 76 -3 -5.12617 | TACCAGTCTCAATTC TTAC ACAT GTAA TTTTTTCGGTCCTTG TERM 3522 2685939 - 2685952 + g 89 -3.1 -5.50499 | overlap 2685940 ATAGTTTCTTGCCAA TTCCT TTCG AGGAG TTTTTTTACATATAA SPA2586 2687134 - 2686070 - | hypothetical protein SPA2587 2687362 - 2687144 - | hypothetical protein TERM 3523 2687323 - 2687304 - G 100 -15 -4.53636 | ATGACATAAGCAAAA GCCCGCCA GTTC TGGCGGGC CTGAGCAAAAACGAT TERM 3524 2687415 - 2687453 + r 93 -15.5 -3.11634 | TGGCTCGTTGTTCAA CCTTGCGGACGGTAAAA ACCAG TTTTATCGTCCGCAACG TTCGCTAATGTAACC SPA2588 2687691 - 2687458 - | hypothetical protein SPA2589 2687891 - 2687703 - | hypothetical protein TERM 3525 2688048 - 2688070 + r 87 -10.6 -4.07455 | overlap 2688063 GAATTGTTAAAGCCT TGCCGTCAGT ATC ACTGACGCCA TTTGTCATCTTCCTG SPA2590 2690461 - 2688059 - | hypothetical protein TERM 3526 2689675 - 2689694 + g 71 -4.8 -4.56597 | opp_overlap 2689674 2689675 GGATCAGTTCATAAG GCACCGGC TTAC GGCGGCGC TTTTTGCGGCGCAAC SPA2591 2691312 - 2690452 - | DNA adenine methylase TERM 3527 2691264 - 2691278 + g 80 -5.6 -4.86731 | GATGCTTAATCAGTT CCGGCA TGA TGGCGG TTTTATTTCCCGCCC SPA2592 2691893 - 2691309 - | putative exonuclease SPA2593 2692117 - 2691890 - | hypothetical protein SPA2594 2692350 - 2692117 - | hypothetical protein SPA2595 2692759 - 2692418 - | hypothetical protein SPA2596 2692923 - 2692723 - | hypothetical protein cII 2693440 - 2692931 - | phage regulatory protein apl 2693715 - 2693473 - | phage regulatory protein TERM 3528 2694108 - 2694098 - g 70 -3.2 -4.7339 | overlap 2694105 AAGAAATCTCAAAAA CGAA ACC TCCG TCACGGTAAGACCAC cI 2693832 - 2694464 + | phage repressor protein cI TERM 3529 2694934 - 2694917 - g 86 -7.7 -4.70659 | gap 1 TGGCACACTGAAAAA GCTGGGCC ACT GGC-CAGC ACCCAACCCGCTCGC SPA2600 2694468 - 2695493 + | phage integrase TERM 3530 2695692 - 2695663 - f 74 -3.5 -4.93877 | opp_overlap 2695666, overlap 2695666 CTCCACCAAATAAAA CAAGGGGTTACGT GAAA ACGTAGTCCCTTT TTGTTGTCCATGTCC TERM 3531 2695666 - 2695689 + F 100 -9.6 -5.20333 | opp_overlap 2695666 2695663 CACCAAATAAAACAA GGGGTTACGT GAAA ACGTAGTCCC TTTTTGTTGTCCATG TERM 3532 2695689 - 2695666 - f 72 -5.2 -4.56436 | opp_overlap 2695666, overlap 2695663 CACCAAATAAAACAA GGGGTTACGT GAAA ACGTAGTCCC TTTTTGTTGTCCATG TERM 3533 2695876 - 2695864 - f 84 -4.9 -5.27779 | TGCAACAGGAAAAAA TCTTT GTG AAAGA GGATTCATACAGGGA TERM 3534 2696000 - 2696021 + F 87 -7.3 -5.1861 | opp_overlap 2695999 2696000 ACCAGCGACTAAAAC CCATCTGCT TCTA AGCAAATGG TTTTTTGATAGTAGA TERM 3535 2696021 - 2696000 - f 71 -9.5 -3.16914 | opp_overlap 2696000, overlap 2695999 ACCAGCGACTAAAAC CCATCTGCT TCTA AGCAAATGG TTTTTTGATAGTAGA SPA2601 2696026 - 2696784 + | bacteriophage integrase TERM 3536 2696800 - 2696825 + T 86 -13.3 -3.43217 | opp_overlap 2696800 CGACCAAATATTAAA GGCCGCTGG AGGTGAAC CCAGCGGCC TTACTTACGTTTCCA TERM 3537 2696825 - 2696800 - T 100 -14 -4.02719 | opp_overlap 2696800 CGACCAAATATTAAA GGCCGCTGGA GGTGAA CCCAGCGGCC TTACTTACGTTTCCA TERM 3538 2697250 - 2697230 - T 100 -8.3 -5.1287 | opp_overlap 2697230 TTCAGACGTAAAAAA GCCCAAC TGGTGAG GTTGGGC TTTTTTACAATCCTA TERM 3539 2697230 - 2697250 + T 100 -9 -5.06451 | opp_overlap 2697230 TTCAGACGTAAAAAA GCCCAACT GGTGA GGTTGGGC TTTTTTACAATCCTA TERM 3540 2697488 - 2697501 + T 100 -3.9 -6.11243 | TTGTTTTTCAAAACC CATTT ACAT AAATG TTTTTTTTGTTGCCT TERM 3541 2698515 - 2698503 - T 100 -3.3 -5.86061 | opp_overlap 2698503 2698514 TTCCATCAAAAAAAA GGTGG TCG CCAGC TTCTTCGAAAGCTTT TERM 3542 2699217 - 2699202 - T 78 -6.1 -4.67353 | opp_overlap 2699215 TTATCGATCCAAAAA CCGCA GGCGGG TGCGG TGTAGCGCCGTTTTT TERM 3543 2699215 - 2699227 + T 85 -6.9 -4.96848 | opp_overlap 2699202 AACCGCAGGCGGGTG CGGTG TAG CGCCG TTTTTGTCTGCGAAA TERM 3544 2699393 - 2699379 - T 95 -7.8 -5.41746 | overlap 2699366 AAGGGTGTAAAAAAA CCCACA TTA TGCGGG CTGAAAAGAGAGAAT SPA2602 2701108 - 2699408 - | putative phage gene TERM 3545 2700377 - 2700391 + g 70 -9.2 -3.64716 | overlap 2700381 GTAATGGCTTTCTAT CTGGCG CTG CGCCGG TGTTTTCAGCAATGG SPA2603 2701602 - 2701111 - | putative phage gene SPA2604 2702353 - 2701628 - | putative phage gene TERM 3546 2702365 - 2702379 + r 79 -10 -3.82946 | ACATCCGGTACCTCC GGCCAT TTA ATGGCC TTATATTTCGCCTCA SPA2605 2702870 - 2702343 - | putative phage gene TERM 3547 2704435 - 2704394 - R 78 -5 -5.00616 | opp_overlap 2704424 GCCGTCCCCAAAAAA CGCCGCCGCCCCGAAGAT GTCGAT ATTTTCCAGGCGCTGGCG CTCGTCCATTCCGGC TERM 3548 2704613 - 2704631 + r 83 -10.2 -3.71848 | opp_overlap 2704612 2704609 2704606, overlap 2704614 CGCATGAACAATCAT TGCCAGCG TAC CGCTGGCC TTATTAATCAGACCA TERM 3549 2704614 - 2704630 + r 84 -13.7 -2.82895 | opp_overlap 2704612 2704609 2704606, overlap 2704613 GCATGAACAATCATT GCCAGCG TAC CGCTGGC CTTATTAATCAGACC SPA2607 2705500 - 2704925 - | putative phage gene SPA2608 2706638 - 2705505 - | putative phage gene TERM 3550 2705907 - 2705889 - G 83 -10.2 -3.92373 | CACGGCATCCACAAA CGGCGCAG AAG CCACGCCG CTGTCCAGCAATAAA TERM 3551 2706016 - 2705972 - G 100 -10.8 -4.86731 | gap 2, opp_overlap 2705988, overlap 2705973 CGTGCTCAAAGAAAA TCCGGTCAATGCTCAGTCCGGC AAC GCCGG-CT-ATCATCGACCGGT ACACCGCGTCCGTGT TERM 3552 2706015 - 2705973 - G 95 -14.3 -3.51557 | gap 2, opp_overlap 2705988, overlap 2705972 GTGCTCAAAGAAAAT CCGGTCAATGCTCAGTCCGGC AAC GCCGG-CT-ATCATCGACCGG TACACCGCGTCCGTG SPA2609 2707015 - 2706686 - | putative phage gene SPA2610 2708982 - 2707012 - | putative phage gene SPA2611 2709427 - 2709170 - | putative phage gene TERM 3553 2709562 - 2709572 + r 74 -6.8 -4.21408 | TTCAGGCGTGGCAGC TGCG TGA CGCA TTTAGTTTTCAGGTT SPA2612 2710537 - 2710244 - | putative phage gene SPA2613 2711002 - 2710547 - | putative phage gene SPA2614 2712126 - 2710999 - | putative phage gene SPA2615 2712830 - 2712123 - | putative phage gene TERM 3554 2712336 - 2712348 + g 89 -9.1 -4.61527 | CGTCCGCGTGATATC GCCCA GCG TGGGC TTTTTCCAGCGTTTT SPA2616 2713333 - 2712827 - | putative phage gene SPA2617 2713782 - 2713330 - | putative phage gene SPA2618 2714538 - 2713879 - | putative phage gene SPA2619 2715555 - 2714584 - | putative phage gene TERM 3555 2715563 - 2715521 - G 85 -9.1 -4.44608 | gap 1 TTCAGGGAAAAATAA CGGCTGGCATCACGC-GC CCCAAACT GCTGCGCCATGCCCGCCG AATATCCGTCCAGTA TERM 3556 2716204 - 2716192 - H 71 -3.4 -4.79352 | opp_overlap 2716192 CTATGGAGAAGAAAA GAAG CTGGT CTTC TTCGTTAGCGTATAT TERM 3557 2717022 - 2717041 + G 74 -7.2 -4.09685 | gap 1 AAGAAAAACGATATT TCCTCGCTG ACG CAG-GAGGA TTTTGACACCTGGGC TERM 3558 2718153 - 2718140 - g 89 -3.1 -5.47159 | CCTGAACACAAAAAA TCAGC TGGT ACTGA AGGCGGCTGGCGTGG SPA2620 2716629 - 2718404 + | putative phage gene TERM 3559 2718429 - 2718416 - g 74 -3.1 -4.92756 | ATGAGTAAAAAGAAA CACTT CGTT AAGCG CGACCAGCGCGGCGA SPA2621 2718401 - 2719462 + | putative phage gene SPA2622 2719513 - 2719782 + | putative phage gene SPA2623 2721619 - 2720087 - | putative phage gene TERM 3560 2720681 - 2720666 - G 74 -10.4 -3.55622 | GCCAATCTGCTGAAA CTGGCG AATG CGCCAG CGTGAAGCCCATGCA TERM 3561 2721710 - 2721721 + r 82 -5.8 -5.15969 | opp_overlap 2721709 GATCCAGCCAGATAT CTGG CCAG CCAG TTTTTTAAGTTCCGG SPA2624 2722961 - 2722149 - | putative phage gene TERM 3562 2724232 - 2724263 + r 74 -3.7 -5.05782 | TCTATCCAACCGGTT GAACCACTGGGTA ACTGCA TAGCCGGTGATTC TTTTTTCAGGTAAGT SPA2625 2724833 - 2724303 - | putative phage gene TERM 3563 2725945 - 2725929 - R 72 -8.1 -3.68366 | CTAGGTGAAAAGCAA GATAATC GAC GATTATC AGAACTGATTGAGCT TERM 3564 2726881 - 2726865 - R 93 -9.5 -4.68724 | TTATTCAAGATAAAA GCATTCA AGA TGAATGC TGAACCTCTTACGCA TERM 3565 2727984 - 2727959 - R 90 -14.7 -3.19425 | opp_overlap 2727959, overlap 2727950 AATGAAGTCTACTAA GCCCGCACAGC ACAA GCTCTGCGGGC TTTTTTACATCTATT TERM 3566 2727959 - 2727984 + r 100 -14.7 -5.15381 | opp_overlap 2727959 2727950 AATGAAGTCTACTAA GCCCGCACAGC ACAA GCTCTGCGGGC TTTTTTACATCTATT fljA 2728985 - 2728446 - | flagellar synthesis: repressor of fliC TERM 3567 2729034 - 2729017 - R 100 -9.8 -4.86621 | ATGCTGAATGAAAAA GCCCCG AATTCA CGGGGC TGAATAAAACGAAAT fljB 2730573 - 2729053 - | flagellin TERM 3568 2730151 - 2730165 + g 71 -10 -3.55622 | GATGGTCAGGGTGTT GTCCTG CGC CAGGAC TTTCACGCCGTTGAA TERM 3569 2732094 - 2732084 - H 76 -4 -5.08824 | TTTTTACGCAAAAAA TCAT CGC ATGA TCAAGTGTCGTATTA iroB 2732199 - 2733314 + | putative glycosyltransferase TERM 3570 2733485 - 2733471 - g 74 -2.8 -4.8622 | GTTGGGAACGAAAAA CACTGA GCA TCATTG TCATCGTAGCATCAG TERM 3571 2735114 - 2735142 + G 70 -5.2 -4.4017 | overlap 2735116 GCAAGGTGTTCGACG TTTCGCTCGCTG ATGAG CGGCGAGGGGGA TTTTCTCGCCCTTGC iroC 2733395 - 2737051 + | putative ABC transporter protein TERM 3572 2737118 - 2737082 - f 82 -7.5 -4.68908 | gap 2, opp_overlap 2737090, overlap 2737090 TTTACGCAAAAGAAA GCCCACAAGCGGCTGTT CCTGT AACAGCCGCTT-TAG-C TATTAGTACTGACCG TERM 3573 2737090 - 2737112 + F 95 -13.5 -3.77831 | opp_overlap 2737090 2737082 AAAGAAAGCCCACAA GCGGCTGTT CCTGT AACAGCCGC TTTAGCTATTAGTAC TERM 3574 2737112 - 2737090 - f 86 -13.5 -3.428 | opp_overlap 2737090, overlap 2737082 AAAGAAAGCCCACAA GCGGCTGTT CCTGT AACAGCCGC TTTAGCTATTAGTAC iroD 2737161 - 2738405 + | putative ferric enterochelin esterase TERM 3575 2738461 - 2738481 + G 78 -6.1 -4.79667 | opp_overlap 2738460 2738463, overlap 2738463 2738477 CGCCAGTACCACAAC AAGCGCTAT CGC ATGGCGCTA TTTTTAGTGAGTTTT TERM 3576 2738463 - 2738479 + G 76 -8.7 -3.9993 | opp_overlap 2738460 2738463, overlap 2738461 2738477 CCAGTACCACAACAA GCGCTAT CGC ATGGCGC TATTTTTAGTGAGTT TERM 3577 2739279 - 2739297 + G 74 -10.2 -3.58329 | overlap 2739281 GCAGCATTACCCGGG CCTGGGCC ACG GGCCCATG TTTAACGCCTCTTTC TERM 3578 2739281 - 2739295 + G 75 -11.4 -3.36341 | overlap 2739279 AGCATTACCCGGGCC TGGGCC ACG GGCCCA TGTTTAACGCCTCTT iroE 2738437 - 2739372 + | hypothetical protein TERM 3579 2739408 - 2739386 - T 100 -17.8 -3.29043 | AACCCGTCGCCAGAA TATGCCCGCC AGC GGCGGGCATA ACCTATCAAAACGAG iroN 2741588 - 2739414 - | outer membrane receptor FepA TERM 3580 2739632 - 2739647 + g 74 -3.2 -4.87291 | overlap 2739625 CTTCACTACGCGACT CCGC ATGTGTTC GCGG TTTTTGCTTGCCGTA TERM 3581 2741954 - 2741989 + r 83 -10.4 -3.71873 | opp_overlap 2741966 CACCGGCGCTTCCCT GTCGACGGCAAACCGT TCTT ACAGTTTGCCAGCGAC TTTCCGTCTGGGTAA TERM 3582 2742106 - 2742070 - R 100 -17.5 -4.07687 | opp_overlap 2742076, overlap 2742072 2742076 ATGTTGGCGCCAAAA TACAAAGCGCCTGGTAA TAA TTATCAGGCGCTTTGCA GACAGAAAACCATCA TERM 3583 2742104 - 2742072 - R 100 -17.9 -3.63744 | opp_overlap 2742076, overlap 2742070 2742076 GTTGGCGCCAAAATA CAAAGCGCCTGGTAA TAA TTATCAGGCGCTTTG CAGACAGAAAACCAT TERM 3584 2742076 - 2742100 + r 100 -15.1 -3.53012 | opp_overlap 2742072 2742070 2742076 GCGCCAAAATACAAA GCGCCTGGTAA TAA TTATCAGGCGC TTTGCAGACAGAAAA TERM 3585 2742100 - 2742076 - R 100 -12.9 -4.45168 | opp_overlap 2742076, overlap 2742072 2742070 GCGCCAAAATACAAA GCGCCTGGTAA TAA TTATCAGGCGC TTTGCAGACAGAAAA SPA2635 2742451 - 2742119 - | putative inner membrane protein TERM 3586 2742558 - 2742579 + r 71 -7.3 -4.10566 | opp_overlap 2742555, overlap 2742573 GTAAATAATTTACTC TCAGCTACT ATTC AGTAGCAGA TTGTTATTCTTACAT SPA2636 2743678 - 2742626 - | hypothetical protein TERM 3587 2743336 - 2743311 - G 74 -7.6 -4.09243 | CATATTTTTTCAAAA GAGACAAGCG GAATTT CTCTTGTCTC AGAATGGTCGCCTTT TERM 3588 2743426 - 2743442 + g 71 -5.9 -4.36914 | overlap 2743428 CACGACACCCATCCA TATCATC CAG GATGATG TTTTCTGGCAACGGA TERM 3589 2744555 - 2744536 - g 77 -3.5 -5.13016 | overlap 2744538 AAGTAAAATTAAAAA GATCCTC CTGCCC GAGGAAC AAATCTTACTCGCTC virK 2744198 - 2745127 + | virulence protein TERM 3590 2746156 - 2746140 - g 85 -6.6 -4.8622 | TGGTGCAATTAAAAA TGAGTG CAGGC CACTCA GTCCCGGCAGCATAC mig-14 2745421 - 2746317 + | putative transcriptional regulator TERM 3591 2746357 - 2746325 - T 100 -9.9 -4.85782 | opp_overlap 2746326, overlap 2746326 TTTGCTAAAAAGAAA GCCTGGACGTAAATA TGT TTTTTACGCCCAGGT TTTTCATAAATCCTG TERM 3592 2746356 - 2746326 - T 90 -13.4 -3.50746 | opp_overlap 2746326, overlap 2746325 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGCCCAGG TTTTTCATAAATCCT TERM 3593 2746326 - 2746356 + T 100 -11.2 -4.75372 | opp_overlap 2746325 2746326 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGCCCAGG TTTTTCATAAATCCT TERM 3594 2746410 - 2746395 - T 71 -3.4 -4.90477 | GATAAAAAACGAAAA TTTAAT CAGA ATTAAA AAAAATAAGTTAACC TERM 3595 2747020 - 2746986 - T 78 -6.4 -4.57353 | opp_overlap 2746987 2746988, overlap 2746987 2746988 TCTCAGGAGATAAAA TGCTTCGGCAATGATG TGA CACCACTGCCGAAATG CTATTTTTACAGAAA TERM 3596 2747019 - 2746987 - T 73 -9.9 -3.3393 | opp_overlap 2746987 2746988, overlap 2746986 2746988 CTCAGGAGATAAAAT GCTTCGGCAATGATG TGA CACCACTGCCGAAAT GCTATTTTTACAGAA TERM 3597 2747018 - 2746988 - T 81 -13.4 -2.59876 | opp_overlap 2746988 2746987, overlap 2746987 2746986 TCAGGAGATAAAATG CTTCGGCAATGATG TGA CACCACTGCCGAAA TGCTATTTTTACAGA nxiA 2748053 - 2747040 - | putative nickel transporter TERM 3598 2747693 - 2747683 - G 87 -2.4 -5.67063 | GCCAGCAGAAAAAAA GCGG AAA CAGC CGTACCGATCAATGA TERM 3599 2747833 - 2747814 - G 93 -4.2 -5.64006 | opp_overlap 2747822 ACCCAATGAAAAAAA CGCCCCCA CGCC TAAAGGCG TTTTACCCTGCTGCA TERM 3600 2747822 - 2747833 + g 74 -7.2 -4.15565 | opp_overlap 2747814 AAAAAAACGCCCCCA CGCC TAAA GGCG TTTTACCCTGCTGCA tctE 2749601 - 2748186 - | putative two-component system sensor kinase TERM 3601 2748813 - 2748823 + g 90 -8.2 -4.68593 | opp_overlap 2748812, overlap 2748791 2748793 CTGCGTTTTTAACAC CGCC AGC GGCG TTTTTAACTGGTGAG tctD 2750262 - 2749588 - | transcriptional regulator TERM 3602 2749655 - 2749665 + g 76 -3.2 -5.02074 | GTAATTCGTACATCG CTTC CCT GGAG TTTTTTACGCAGTCG TERM 3603 2750184 - 2750194 + g 77 -8.2 -4.07687 | CAAATACGCAGTCCA CGGC AAA GCCG TTTTGCACCAGCGCT SPA2642 2750301 - 2750420 + | hypothetical protein TERM 3604 2751292 - 2751274 - g 83 -7.3 -4.63527 | opp_overlap 2751274 2751273 CGACGAGTTTAAAAA GCAGCGC GATCT GCGCGGC CTGTTTGAATTCGAC SPA2643 2750615 - 2751394 + | hypothetical protein SPA2644 2751409 - 2751840 + | hypothetical protein TERM 3605 2752253 - 2752310 + G 73 -5.6 -4.62336 | overlap 2752261 ATCATTCTATTCGCC CCTTTACTGGCGCAATGGT-CGCTGGCC TTTG GGCCGGCGGAATATTTCGCCT-TAATGG TTTTTGCCATCGCCT TERM 3606 2752261 - 2752303 + G 75 -11.3 -3.4158 | gap 1, overlap 2752253 ATTCGCCCCTTTACT GGCGCAATGGT-CGCTGGCC TTTG GGCCGGCGGAATATTTCGCC TTAATGGTTTTTGCC SPA2645 2751851 - 2753365 + | hypothetical protein TERM 3607 2753962 - 2753924 - g 81 -8 -4.25104 | opp_overlap 2753934 2753936, overlap 2753944 2753945 CGCTGTTGATCAAAA CGCTCCTCAACCGTGCAC AAG GCGCGCTGTTGATCAGCG CCGAAGGGATCGATG SPA2646 2753668 - 2754645 + | hypothetical protein TERM 3608 2755301 - 2755317 + G 91 -7.2 -4.84311 | CGGCTGGTCAAAATG CTGGGC GTGGA GCCCGG TTTTATTATCTGCCC TERM 3609 2755410 - 2755420 + G 71 -8.2 -3.87994 | ACCCGATCCCCGATC CGGC AAT GCCG TTTCTCGGCGTCCAT ygaF 2754671 - 2755939 + | hypothetical protein TERM 3610 2756158 - 2756125 - g 71 -10.9 -3.16564 | gap 1 GCGCGACGCCATCAA CGC-CGCCAATCGCGC CCT GCCCGCCTGGCGCGCG CTCACCGCCAAAGAG gabD 2755961 - 2757409 + | succinate-semialdehyde dehydrogenase I gabT 2757424 - 2758707 + | 4-aminobutyrate aminotransferase TERM 3611 2758791 - 2758740 - f 85 -14 -3.05384 | opp_overlap 2758733 CGGGTGGCGACGTAA CTGTCTTATCCGGCCTACAA AAACCGTTTCGA TTGTAGGCCGAATAAGCCAG GCGCCATCCGGTAAA TERM 3612 2759053 - 2759063 + G 83 -8.2 -4.41633 | opp_overlap 2759040 ATGGCCGTCGCCACG CCGG ATA CCGG TTCTTTTTCCACCTA TERM 3613 2759338 - 2759363 + G 74 -3.1 -4.89852 | overlap 2759339 ATCCTGGCGTTTATC GCGCTGGGCGC GACG GCGATTAGCGG TTTTTATCCGTATGC gabP 2758837 - 2760237 + | gamma-aminobutyrate transporter TERM 3614 2760762 - 2760776 + G 71 -4.2 -4.57304 | CGCTTATTTGACCTG GCGG CCCGCTA CCGC TTTATTTGGTTACGT TERM 3615 2760916 - 2760895 - g 70 -10.1 -3.37344 | overlap 2760896 GCGCCAGCGAATTAA TGCGTCAGC ATTT GCTGACGCC GATTCCCATTATTCG TERM 3616 2760915 - 2760896 - g 78 -13.6 -2.62192 | overlap 2760895 CGCCAGCGAATTAAT GCGTCAGC ATTT GCTGACGC CGATTCCCATTATTC ygaE 2760279 - 2760956 + | DNA-binding transcriptional regulator CsiR ygaU 2761457 - 2760978 - | hypothetical protein TERM 3617 2761147 - 2761137 - G 70 -5.4 -4.4009 | overlap 2761139 TTTTACGGTATAAAA CTGA CTT TCAG CCGCCGGCGTCGTGG TERM 3618 2761304 - 2761315 + g 91 -7.2 -4.93288 | TCACTTTGTCAGTGT CGGG TATT CCCG TTTTATTTAAATGTT TERM 3619 2761513 - 2761496 - R 90 -14.1 -3.31263 | AGGTTATCCTGATAA GCGGCGC TTAT GCGCCGC CGGTGGCCGGTAATT yqaE 2761685 - 2761527 - | hypothetical protein TERM 3620 2761737 - 2761725 - H 78 -6.3 -4.58395 | GTCATTGTTTAAAAA GAGAT TTT ATCTC TAAGCATAGTCAGTT TERM 3621 2761771 - 2761781 + H 76 -8.2 -4.18094 | overlap 2761770 CTGAGCCTGCCAGTC GCGC GCC GCGC TTTTACCCTCCTTTA SPA2654 2761868 - 2762167 + | putative transcriptional regulator ygaP 2762177 - 2762704 + | hypothetical protein SPA2656 2762837 - 2762962 + | hypothetical protein stpA 2763453 - 2763052 - | DNA binding protein, nucleoid-associated TERM 3622 2763718 - 2763698 - H 71 -9.7 -3.16564 | opp_overlap 2763694 TGCGTATCTCAGTAA CCACGGTGA CCC TCACGGTGG CTGACCTTATACAGA TERM 3623 2763930 - 2763911 - H 93 -9.4 -4.86033 | opp_overlap 2763911 2763910 AAATCGCCAGAAAAA CAATGCAT TATA ATGCATTG ATTTAAAAGTAATTA SPA2658 2764151 - 2764600 + | hypothetical protein TERM 3624 2764608 - 2764632 + T 100 -20.1 -4.35675 | opp_overlap 2764605, overlap 2764610 AGGCGTAAGTTAGCG TCGCGACTGGC ATT GCCAGTCGCGA TTTTAGTCGCTTTTT TERM 3625 2764610 - 2764642 + T 87 -7 -5.14563 | opp_overlap 2764605, overlap 2764608 GCGTAAGTTAGCGTC GCGACTGGCATTGC CAGTC GCGATTTTAGTCGC TTTTTTCGTCGCCAA ygaC 2764986 - 2764585 - | hypothetical protein SPA2660 2766892 - 2765558 - | hypothetical protein SPA2661 2766981 - 2767412 + | hypothetical protein SPA2662 2767409 - 2767585 + | hypothetical protein TERM 3626 2767635 - 2767654 + F 78 -6.3 -4.67635 | opp_overlap 2767625 2767634 CAACACACGACAATC CGACGCG TTTCAT CGCGCCG TTTTCTCATTTTAAA nrdH 2767684 - 2767929 + | glutaredoxin-like protein TERM 3627 2768080 - 2768117 + GF 70 -3.4 -4.68593 | overlap 2768083 CGTCATACGGCGGCG GCGGGATGGCCGGT-GCG GTGC CGCGACAGGTGATCC-GC TTTTTAAATGATGAA nrdI 2767926 - 2768336 + | ribonucleotide reductase stimulatory protein TERM 3628 2768915 - 2768932 + GF 76 -4.7 -4.80882 | opp_overlap 2768915 2768916, overlap 2768916 CTGCAACTCTCCAAA CGCGGCG GCGG CGTCGCA TTTTTACTCTCCAAT TERM 3629 2769056 - 2769077 + GF 73 -7.9 -4.0641 | gap 1, overlap 2769057 GCCAACCAGCTTGGC GCGCGCCAGG GGG CC-GGCGCGG TTTATCTCCATGCGC TERM 3630 2769057 - 2769076 + GF 75 -11.4 -3.03525 | gap 1, overlap 2769056 CCAACCAGCTTGGCG CGCGCCAGG GGG CC-GGCGCG GTTTATCTCCATGCG TERM 3631 2769189 - 2769150 - gf 79 -2.9 -5.14965 | gap 1 ATGCCGACGAAAAAA TCC-GGATCAAAACGC TCTCTCTCG GCGTGGTGATCCCGGA CATCACCTTCCGGCT TERM 3632 2769231 - 2769217 - gf 74 -2.7 -4.86731 | opp_overlap 2769218, overlap 2769218 2769226 GCTGGCGAAAGAAAA CGCGC AAATG GCGCT CTTTTCGCCCTATGA nrdE 2768309 - 2770453 + | ribonucleotide-diphosphate reductase subunit alpha TERM 3633 2771101 - 2771134 + F 83 -8.9 -4.2461 | opp_overlap 2771105 AAAAACTATCGGCAA TCGAGCGTGAAGAGT TAAA GCTTTTCGCGCTGGA TTTGTTGATGGAACT TERM 3634 2771400 - 2771389 - f 74 -5.8 -4.62336 | ATGTGATGGGAAAAA CGGT CGAA ACCG AAGACGAAGACTGGA TERM 3635 2771431 - 2771462 + F 90 -9.6 -4.41616 | ACTTTTAACCTTACG GGCATGGGAAAT AACGTTAC ATTTTCCATGCC TTTATTTCAAGCAAT TERM 3636 2771536 - 2771564 + F 93 -9 -4.8269 | opp_overlap 2771527 2771536, overlap 2771538 ATACGAGTGACATTA TTCACCTGGATT CCTCC AATTCAGGTGGA TTTTTGCTGGTTGTC TERM 3637 2772220 - 2772210 - g 71 -4.6 -4.57073 | overlap 2772211 GAGCGTCGCGAAAAA GCGC TGG ACGC CTTGCGTCAGGTGGG proV 2771778 - 2772980 + | glycine betaine transporter ATP-binding subunit proW 2772973 - 2774037 + | glycine betaine transporter membrane protein TERM 3638 2774484 - 2774474 - g 93 -4.6 -5.64274 | TGATCGATAAAAAAA CCGC CGA GCAG TACAACATCACCAAT proX 2774107 - 2775102 + | glycine betaine transporter periplasmic subunit TERM 3639 2775113 - 2775154 + F 81 -12.4 -3.16971 | gap 1, opp_overlap 2775125 AATAATATCGTTTTT TATGCCGGATA-AGGCGCA GTTCA TGCGCCGCTATCCGGCCTA TTCAATCTCTCCTCA TERM 3640 2775141 - 2775125 - f 70 -9.4 -3.30124 | opp_overlap 2775113 TTTTATGCCGGATAA GGCGCA GTTCA TGCGCC GCTATCCGGCCTATT TERM 3641 2776027 - 2776048 + G 71 -10.1 -3.53444 | gap 1, overlap 2776026 TGATTGGCCTGTTTG GC-CTGGCGG GGG CCGCCGGCGC TTTAGGCGCGCGTCC TERM 3642 2776352 - 2776368 + G 85 -11.5 -4.0371 | opp_overlap 2776352, overlap 2776353 CTCCGCCTGGCAACA TGCCGGC TGG GCCGGCG TTTGTCTGGCGGGTG TERM 3643 2776353 - 2776367 + G 81 -12.8 -3.01905 | opp_overlap 2776352, overlap 2776352 TCCGCCTGGCAACAT GCCGGC TGG GCCGGC GTTTGTCTGGCGGGT SPA2670 2775267 - 2776451 + | putative transmembrane transport protein TERM 3644 2777008 - 2777029 + G 71 -5.9 -4.24326 | opp_overlap 2777008, overlap 2777000 2777011 GCCAGCCGTCACGAA GACTTTCCT TATC AGGAAATTC TTTTGACTCGTCTTT TERM 3645 2777011 - 2777026 + G 71 -6.2 -4.22883 | opp_overlap 2777008, overlap 2777008 2777000 AGCCGTCACGAAGAC TTTCCT TATC AGGAAA TTCTTTTGACTCGTC emrR 2776948 - 2777478 + | transcriptional repressor MprA TERM 3646 2777526 - 2777549 + F 71 -7.4 -3.85817 | opp_overlap 2777520 ACAGGAAAGCGGACA GGCCGGCA CGCATTAC TGCTGGCC TTTCTGACAACAGGT TERM 3647 2777942 - 2777921 - g 74 -6.5 -4.323 | gap 1, opp_overlap 2777934, overlap 2777914 2777912 2777922 2777923 TTGAAAGAGCCAAAA CG-GCGCTGG CCT CCAGCGTGCG CCAGACGCACCAGTT TERM 3648 2778029 - 2778005 - g 76 -2.8 -5.03314 | gap 1, overlap 2778006 2778027 TCGACGTGCAAAAAA CCGCCCTGGCG CAAG CGC-AAAGCGA CCTTAACCGTCGTGT emrA 2777605 - 2778777 + | multidrug resistance protein A TERM 3649 2779552 - 2779577 + G 83 -7.6 -4.56791 | opp_overlap 2779554, overlap 2779545 2779555 GATCGTCTGGGAACT GACCGACGAT CACCCT ATCGTCGATC TTTCTCTTTTTAAAT emrB 2778794 - 2780332 + | multidrug resistance protein B TERM 3650 2780361 - 2780346 - T 86 -9 -4.41206 | opp_overlap 2780346 AACTATCTGATAAAA GGGATC TACG GATCCC TTTTTTAGTAGACCA TERM 3651 2780346 - 2780361 + T 100 -9 -5.14563 | opp_overlap 2780346 AACTATCTGATAAAA GGGATC TACG GATCCC TTTTTTAGTAGACCA TERM 3652 2780920 - 2780892 - T 74 -5.4 -4.56775 | gap 2 ATCGCCGTTGAAAAA CGCCC-GTT-TTGC CAG GCAATAACCGGACG GACGTAAGCCACGTT TERM 3653 2782062 - 2782044 - T 100 -10.2 -5.5604 | opp_overlap 2782044 2782040 TTAAGCAATAAAAAA CCCCGGCC ATA AACCGGGG TTAATTTAAATACTG TERM 3654 2782044 - 2782062 + T 72 -8.8 -3.55122 | opp_overlap 2782044, overlap 2782040 TTAAGCAATAAAAAA CCCCGG CCATAAA CCGGGG TTAATTTAAATACTG luxS 2782612 - 2782097 - | S-ribosylhomocysteinase TERM 3655 2782365 - 2782355 - G 77 -8.2 -4.18494 | overlap 2782342 2782356 CAGGCTCATGTAAAA GCCG GTG CGGC AGCCCATCGGCGAGA TERM 3656 2782510 - 2782542 + g 71 -4.7 -4.56597 | opp_overlap 2782508 AACGCAGATCAAACA CGGTGATTGCGTCGC CAT GCGGGGTGTTCATCG TTTTTGCAACCCGGA TERM 3657 2782730 - 2782748 + r 100 -14.6 -5.48213 | opp_overlap 2782727 CAGCGATGAAATTTT GGCCACTC CGT GAGTGGCC TTTTTCTTTTGGGTC gshA 2784318 - 2782762 - | glutamate--cysteine ligase TERM 3658 2783626 - 2783657 + g 74 -2.2 -5.0133 | gap 1, opp_overlap 2783615, overlap 2783629 2783648 2783655 CAAACGCAGCGACGT CGCA-TACGGCAGGT AGT ACATGCCGCAGTCCG TTTTTTCAAACGGTA yqaA 2784820 - 2784395 - | hypothetical protein yqaB 2785383 - 2784817 - | fructose-1-phosphatase TERM 3659 2785323 - 2785296 - G 74 -7.6 -4.09243 | gap 1, opp_overlap 2785297, overlap 2785297 CATAGCGCCCCAAAA CCTCACGCCACGC TTT GCGATGCGTG-GG TTCGGTATCCAGGAG TERM 3660 2785533 - 2785548 + r 72 -9 -3.57783 | overlap 2785521 ACTCGCCCTTCGGGC CGTTGC TGAT GCAACG TTATCCTTCTGATGC csrA 2786557 - 2786372 - | carbon storage regulator TERM 3661 2786740 - 2786785 + r 72 -9 -3.61089 | gap 2, opp_overlap 2786753 TTATCGTTGTCGATA GCGTTGACGTAAACGCCGCAGC ATGG GCTGCGGCGCCAACG--AACGC TTATAATTATTGCAA TERM 3662 2786774 - 2786753 - R 100 -17.3 -3.6502 | opp_overlap 2786740 TAGCGTTGACGTAAA CGCCGCAGC ATGG GCTGCGGCG CCAACGAACGCTTAT alaS 2789422 - 2786792 - | alanyl-tRNA synthetase recX 2790158 - 2789658 - | recombination regulator RecX TERM 3663 2790208 - 2790189 - R 91 -11.4 -4.24002 | opp_overlap 2790189 2790180 GGGTAAATGCCAAAA GGGCCGCA TAAA TGCAGCCC TTGATGGTAATTTAA recA 2791336 - 2790275 - | recombinase A ygaD 2791918 - 2791421 - | competence damage-inducible protein A TERM 3664 2792388 - 2792363 - R 80 -9.8 -3.89505 | gap 1, overlap 2792353 AAAAAGCCATAATAA TAGCGGAGGGG GTGCT CCCCTCC-CTA AGCGTAAATTAGCGC mltB 2793476 - 2792397 - | membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan srlA 2793730 - 2794293 + | PTS system, glucitol/sorbitol-specific IIBC component TERM 3665 2794468 - 2794458 - g 71 -8.2 -3.9122 | overlap 2794459 GACGGCTTTAAAGAA GGCG AAC CGCC GGAAGCGGAGATCGG srlE 2794290 - 2795261 + | PTS system, glucitol/sorbitol-specific IIBC component srlB 2795273 - 2795635 + | glucitol/sorbitol-specific PTS system component IIA srlD 2795647 - 2796426 + | sorbitol-6-phosphate dehydrogenase srlM 2796503 - 2796862 + | DNA-binding transcriptional activator GutM TERM 3666 2797307 - 2797294 - g 84 -3.1 -5.30686 | gap 1, overlap 2797296 AACACCCACAAAAAA GC-GCT GAT AGCCGC AGCCGCTGTGAAATA srlR 2797060 - 2797833 + | DNA-bindng transcriptional repressor SrlR gutQ 2797826 - 2798791 + | D-arabinose 5-phosphate isomerase ygaA 2800296 - 2798788 - | anaerobic nitric oxide reductase transcription regulator TERM 3667 2800409 - 2800387 - H 78 -5.8 -4.82667 | TGACTATACCAAAAA TACAAAATTA TTA TAATTTTATA TAAATCAATAAGATG TERM 3668 2800592 - 2800578 - g 86 -7.8 -4.68724 | overlap 2800579 GCACTGAATACAAAA CGCTGC GTG GCAGCA GCTATAACAGCTATC TERM 3669 2800883 - 2800869 - g 70 -7 -4.09739 | TTAAGGTGGTGAAAA CCGGCG ATA CGCTGG ATATCGGCAACGGCA SPA2698 2800493 - 2801932 + | anaerobic nitric oxide reductase flavorubredoxin TERM 3670 2802357 - 2802337 - g 86 -14.7 -2.87132 | opp_overlap 2802334 2802330 2802337 CGCGCCTGTGAGACA CCACTGCGC GAC GCGCAGCGG GTGCTGATTGTCGGC ygbD 2801929 - 2803062 + | nitric oxide reductase hypf 2805399 - 2803159 - | hydrogenase maturation protein TERM 3671 2803420 - 2803400 - G 71 -6 -4.30844 | overlap 2803402 AGCGCATCATGAAAA GCCCAGGC GCGTT GCGCGGGC GTGGCCTGCCAGTTC TERM 3672 2803602 - 2803566 - G 76 -12.3 -3.12351 | gap 1, overlap 2803587 CGCCCTCATAGCTAA GCGAT-GCTGGCGCGC AGCGAA GCGCGGCAGCCACCGC GTCAAACAACCGCCC TERM 3673 2803666 - 2803678 + g 74 -3.3 -4.89477 | CTCAATGGCGCGCGC CAGGA CAC TCCAG TTTTGTTGTTGCAGC TERM 3674 2803746 - 2803732 - G 82 -11.4 -3.86346 | CCAGTCCGGCACAAA GCGCAG GCA CTGCGC TAACAGATTACGCCA TERM 3675 2804902 - 2804882 - G 74 -6.8 -4.25104 | opp_overlap 2804882 2804880 GGCTGGGCATGAAAA CGGCGATC GTACG GATCGCGG TATTCGCTGTCGCAT hydN 2806090 - 2805545 - | electron transport protein HydN TERM 3676 2805575 - 2805589 + g 87 -8.5 -4.58395 | opp_overlap 2805556 2805574 TGCCGTTGAATCCAG CGCCG CACGA CGGCG TTTTTCCGCGCTCAG TERM 3677 2806197 - 2806226 + r 90 -15.1 -2.62616 | opp_overlap 2806213, overlap 2806185 TTTCGTGAGCATTTA CGTGTCATCGTCA CAAG TGTCGATGACACG TAATGTCGCCAGTGG SPA2702 2807100 - 2806291 - | hypothetical protein hycI 2807597 - 2807127 - | hydrogenase 3 maturation protease hycH 2808000 - 2807590 - | formate hydrogenlyase maturation protein TERM 3678 2807645 - 2807673 + g 70 -8.9 -3.75024 | opp_overlap 2807654, overlap 2807654 TCCTGATGAATGTCA TGCAGCATACTGA GCA TCAGTTTGCTCCA TTCTTGCTGCTGCGG TERM 3679 2807693 - 2807729 + g 71 -10.1 -3.59315 | gap 1, overlap 2807696 TGCTGCTGCGGGGTC TGCGCGGCGCGCGCCT CATCAA ACGCGCGCGCCA-GCA TTTGCACATGGTTGA TERM 3680 2807696 - 2807728 + g 76 -12.7 -2.75268 | gap 1, overlap 2807693 TGCTGCGGGGTCTGC GC-GGCGCGCGCCT CATCAA ACGCGCGCGCCAGC ATTTGCACATGGTTG hycG 2808764 - 2807997 - | formate hydrogenlyase subunit 7 hycF 2809306 - 2808764 - | formate hydrogenlyase complex iron-sulfur subunit hycE 2811025 - 2809316 - | formate hydrogenlyase subunit 5 hycD 2811966 - 2811043 - | formate hydrogenlyase subunit 4 TERM 3681 2811798 - 2811780 - G 71 -4.5 -4.62069 | gap 1, overlap 2811781 GCGTCAGGCGAAAAA CCCAGCCG GAAT CAGC-GGG CGCAATACTCTGACG hycC 2813795 - 2811969 - | formate hydrogenlyase subunit 3 TERM 3682 2812041 - 2812053 + g 71 -10.5 -3.28712 | opp_overlap 2812037 2812035 ACGACGGAACAGCAC CGCGG CCG CCGCG TTCTGCCAGCCCGGC TERM 3683 2813388 - 2813370 - G 80 -12.4 -3.33815 | opp_overlap 2813369 2813370 2813372 ACCGCCGGTAAGGAA CACGGCGC AGA GCGCCATG ATTTCAGCCATCACC TERM 3684 2813745 - 2813733 - G 75 -6.9 -4.52214 | overlap 2813741 AAACGAAAACAGAAA CGCCA GAA CGGCG GCGGCGGCAAACCAC TERM 3685 2813769 - 2813741 - G 73 -10.2 -3.41528 | gap 1, overlap 2813733 ACAGAAACGCCAGAA CGGCGGCG-GCGG CAAA CCACGCGACGCCG CTAGTAATCAGTGAA hycB 2814403 - 2813795 - | formate hydrogenlyase subunit 2 TERM 3686 2814254 - 2814271 + g 74 -2.7 -4.86621 | gap 1, opp_overlap 2814256, overlap 2814256 2814257 TTCACAGTGGTGACA GAG-CTGC GGC GCAGATTC TTTTTCATTCAGCAT TERM 3687 2814527 - 2814493 - R 76 -8.6 -4.11216 | overlap 2814495 CGCCCATCCCCAAAA CATTCATGACATGGCG CAA CGCCATATCGCGAATC AAAGCGGGCAACGCC TERM 3688 2814525 - 2814495 - R 82 -11.2 -3.65542 | overlap 2814493 CCCATCCCCAAAACA TTCATGACATGGCG CAA CGCCATATCGCGAA TCAAAGCGGGCAACG hycA 2815010 - 2814549 - | formate hydrogenlyase regulatory protein HycA hypA 2815220 - 2815576 + | hydrogenase nickel incorporation protein TERM 3689 2815609 - 2815577 - f 79 -11.4 -3.40601 | gap 1 GAAACTGAAGATTAA TGCCGGATAA-GACG CTCG CGTCGCCATCCGGCA GAAAGCCTGTAACAA hypB 2815646 - 2816518 + | hydrogenase nickel incorporation protein HypB hypC 2816509 - 2816781 + | hydrogenase isoenzymes formation protein TERM 3690 2816899 - 2816922 + G 86 -7.4 -4.82855 | gap 1, opp_overlap 2816898, overlap 2816901 2816902 TGCGCATTATGGAAG TCTGCGGGGGT CAT ACCCACGC-GA TTTTTAAATTTGGTC TERM 3691 2817676 - 2817648 - g 91 -14.6 -3.05384 | opp_overlap 2817639 CTGGGCGTGATTGAA TCCTCCGGCGTC CACCT GACGCCGGAGTA TCAGCGCTTTGACGC hypD 2816781 - 2817902 + | hydrogenase isoenzyme formation protein HypD TERM 3692 2818038 - 2818060 + G 70 -5.4 -4.38712 | opp_overlap 2818038 AGCTGGCGCAACTGA CGGCGGAGGG CGA CCGTCTGGCG TTTTCTACCGATAGC hypE 2817941 - 2818909 + | hydrogenase isoenzyme formation protein HypE fhlA 2819128 - 2821206 + | transcriptional activator of the formate hydrogenlyase system ygbA 2821612 - 2821268 - | hypothetical protein TERM 3693 2821410 - 2821450 + g 95 -9.6 -4.72272 | opp_overlap 2821424, overlap 2821411 ATCTCCTCGCGTTTA GCCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGGG TTTTTCCTCGCCAAA TERM 3694 2821411 - 2821449 + g 84 -13.1 -3.43042 | opp_overlap 2821424, overlap 2821410 TCTCCTCGCGTTTAG CCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGG GTTTTTCCTCGCCAA TERM 3695 2822378 - 2822344 - g 74 -2.1 -5.03314 | gap 1 CCGAGCTGGAAAAAA TTC-CCGCCGATCAGC GCTG GCTGGTCACCAGTGAA GGCGCGTTCTCTTAC sitA 2821794 - 2822711 + | Iron transport protein, periplasmic-binding protein sitB 2822708 - 2823529 + | Iron transport protein, ATP-binding component sitC 2823526 - 2824386 + | Iron transport protein, inner membrane component sitD 2824377 - 2825225 + | Iron transport protein, inner membrane component SPA2723 2825197 - 2825406 + | hypothetical protein sprB 2826257 - 2825502 - | AraC family transcription regulator TERM 3696 2825677 - 2825693 + g 77 -3.7 -5.03145 | TAAATACTGACGGTT TTTGTTC CCA GACCAAA TTTTTTCGCCAGTTC sprA 2827529 - 2826642 - | AraC family transcription regulator SPA2726 2828327 - 2827875 - | hypothetical protein TERM 3697 2827939 - 2827916 - G 71 -6 -4.36914 | opp_overlap 2827916 2827919, overlap 2827920 CCCCGCCCGATAAAA TAATCTCCTG CATC CAGGAGGTCA TTTGTGACTGTGCAT orgB 2829014 - 2828343 - | oxygen-regulated invasion protein orgA 2829549 - 2828971 - | oxygen-regulated invasion protein TERM 3698 2829334 - 2829363 + gr 100 -16.5 -3.11073 | overlap 2829334 2829337 TTGCGGCAGTCGGCG CCACTGACGCAGC CACA GCTGCGTCAGTGA GTTTTGAATACACTC TERM 3699 2829334 - 2829364 + gr 100 -16.3 -4.1899 | gap 1, overlap 2829334 2829337 TTGCGGCAGTCGGCG C-CACTGACGCAGC CACA GCTGCGTCAGTGAG TTTTGAATACACTCC TERM 3700 2829337 - 2829360 + gr 100 -16.8 -2.76404 | overlap 2829334 2829334 CGGCAGTCGGCGCCA CTGACGCAGC CACA GCTGCGTCAG TGAGTTTTGAATACA prgK 2830300 - 2829542 - | pathogenicity 1 island effector protein TERM 3701 2829574 - 2829605 + g 77 -4.5 -4.91109 | opp_overlap 2829603 TCGCCTTATCATCAG CCGTTATGCCT TTCTTATTGC GGGCATAATGG TTTTTGTAATACCAG prgJ 2830602 - 2830297 - | pathogenicity 1 island effector protein prgI 2830863 - 2830621 - | pathogenicity 1 island effector protein prgH 2832066 - 2830888 - | pathogenicity 1 island effector protein hilD 2832382 - 2833311 + | AraC family transcription regulator TERM 3702 2833582 - 2833614 + F 100 -11.3 -4.81163 | overlap 2833584 GATGACACTATCTCC TTCCGGCTTTAACCC TGT GGATTAAGGCCGGCA TTTTATTCATATTTA TERM 3703 2833584 - 2833612 + F 83 -13.9 -2.66616 | overlap 2833582 TGACACTATCTCCTT CCGGCTTTAACCC TGT GGATTAAGGCCGG CATTTTATTCATATT iagA 2834402 - 2836063 + | invasion protein regulator iagB 2836081 - 2836563 + | cell invasion protein TERM 3704 2836619 - 2836564 - T 74 -7.2 -4.32678 | opp_overlap 2836573 2836575, overlap 2836575 GCGGTAAACAAATAA TTATACAGAAATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATGTTTTTATCA GCTTGCCGTCGTCAT TERM 3705 2836573 - 2836610 + T 100 -10.1 -4.87786 | opp_overlap 2836564 2836575, overlap 2836575 AAATAATTATACAGA AATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATG TTTTTATCAGCTTGC TERM 3706 2836575 - 2836608 + T 95 -12.7 -4.05669 | opp_overlap 2836575 2836564, overlap 2836573 ATAATTATACAGAAA TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA TGTTTTTATCAGCTT TERM 3707 2836608 - 2836575 - T 100 -14.9 -4.18019 | opp_overlap 2836573 2836575, overlap 2836564 ATAATTATACAGAAA TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA TGTTTTTATCAGCTT SPA2736 2838248 - 2836617 - | stpA-like protein sicP 2838585 - 2838235 - | chaperone (associated with virulence) SPA2738 2838914 - 2838654 - | hypothetical protein sipF 2839206 - 2838958 - | acyl carrier protein sipA 2841282 - 2839225 - | pathogenicity island 1 effector protein (function unknown) TERM 3708 2839660 - 2839648 - G 78 -6.2 -4.7173 | TATCACACCCAAAAA CGCC TCACG GGCG TTGAAATGTATTGAA TERM 3709 2840417 - 2840427 + g 76 -3.2 -5.0133 | TTGATATTAATACCC GTAG GTT CTGC TTTTTTCCCACCATC sipD 2842323 - 2841301 - | pathogenicity island 1 effector protein TERM 3710 2842383 - 2842328 - R 77 -10.4 -3.34806 | gap 1, opp_overlap 2842332 2842337, overlap 2842326 ATATTAAGCATAATA TCCCCAGTTCGCCATCAGGAGGGCGAT TAA ATC-CCCCCCTGATGGCGTATAGTTGA TCTGTCAGATTAAGC TERM 3711 2842332 - 2842379 + r 90 -14.2 -3.32765 | gap 1, opp_overlap 2842328 2842326, overlap 2842337 TAAGCATAATATCCC CAGTTCGCCATCAGGAGGGCGAT TAA ATCCCCC-CCTGATGGCGTATAG TTGATCTGTCAGATT TERM 3712 2842337 - 2842374 + r 100 -19.3 -2.96235 | gap 1, opp_overlap 2842328 2842326, overlap 2842332 ATAATATCCCCAGTT CGCCATCAGGAGGGCGAT TAA ATCCCCC-CCTGATGGCG TATAGTTGATCTGTC sipC 2843622 - 2842393 - | pathogenicity island 1 effector protein TERM 3713 2843377 - 2843397 + g 70 -6.9 -4.07687 | CAAATCCTGATTCAT GTCGGTATT TTG AATACTGGC TTTTAAAAAGGACGT sipB 2845431 - 2843650 - | pathogenicity island 1 effector protein TERM 3714 2843692 - 2843678 - G 74 -4.2 -4.77165 | opp_overlap 2843679, overlap 2843679 TGGCGCAGAATAAAA CGCGAA GCA TCCGCA TTTTGCTGTACCGCA TERM 3715 2843840 - 2843822 - G 70 -5.2 -4.46212 | opp_overlap 2843824 2843825, overlap 2843823 2843825 2843830 CGGGCGAGCATAAAA TCAGCAAG CGC CTCGCTGG CATTTTTAATAAATA TERM 3716 2843824 - 2843842 + g 74 -4.4 -4.7497 | opp_overlap 2843823 2843822 2843825 2843830, overlap 2843825 GGCGAGCATAAAATC AGCAAGCG CCT CGCTGGCA TTTTTAATAAATACC TERM 3717 2844448 - 2844432 - G 73 -5.1 -4.59773 | overlap 2844444 CCCCACCGGTAAAAA CAGCG GCCACAA CGCTG ACAATGGTTAGCAGC TERM 3718 2844973 - 2844985 + g 81 -6.9 -4.77438 | GTCATAAACACTCTT GGCGG TAT CCGTC TTTTTGATGCTGGCT TERM 3719 2845381 - 2845364 - G 74 -7.7 -4.09739 | gap 1, opp_overlap 2845370, overlap 2845353 2845365 CGAACGCCTTCAAAA GCCGCCTC AGC GAGGCG-C GGATTTTGGGTATAT spaT 2845931 - 2845434 - | hypothetical protein spaS 2847139 - 2846069 - | surface presentation of antigens protein SpaS spaR 2847917 - 2847126 - | secretory protein (associated with virulence) TERM 3720 2847247 - 2847259 + g 71 -4.7 -4.62783 | opp_overlap 2847248, overlap 2847248 AGCAGCATAATTAAA ACGGC AAT GCCGC TTTTTACCGTCAGTG TERM 3721 2847258 - 2847248 - G 83 -8.2 -4.51174 | opp_overlap 2847247 2847248 GCAGCATAATTAAAA CGGC AAT GCCG CTTTTTACCGTCAGT TERM 3722 2847736 - 2847726 - G 72 -2.4 -4.87665 | CGCCACCGATAAAAA CGGC GGC GCCT CGTTCAATGCATGCG TERM 3723 2847855 - 2847842 - G 95 -3.1 -5.84381 | gap 1 GCAGGAAGAAAAAAA TCGGCG CTA CGC-GA GCAAACCCTAGTGCC spaQ 2848181 - 2847921 - | secretory protein (associated with virulence) TERM 3724 2848132 - 2848080 - G 79 -11.4 -3.61715 | gap 1, overlap 2848081 TACCGTCTGGAATAA CCCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGGA TCAAAACAAGATAGA TERM 3725 2848131 - 2848081 - G 76 -12.7 -2.76815 | gap 1, overlap 2848080 ACCGTCTGGAATAAC CCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGG ATCAAAACAAGATAG spaP 2848881 - 2848207 - | surface presentation of antigens protein SpaP spaO 2849782 - 2848871 - | surface presentation of antigens protein SpaO TERM 3726 2849247 - 2849233 - G 71 -5.7 -4.24342 | TCGCGTAGCAATAAA CTTCC GCACG GGAAG TACGAATCAGGAGTA spaN 2850792 - 2849782 - | antigen presentation protein SpaN TERM 3727 2850259 - 2850276 + g 74 -6.9 -4.30719 | opp_overlap 2850258 GCCCTCTTTACGAAC GCCTTCG CCCG CGATGGC TTTATTATCCCCAGG TERM 3728 2850610 - 2850620 + g 71 -4.6 -4.59089 | TGCCGCCAGTAATAC CGGT AAA GCCG TTTCTTTATGCATTA spaM 2851235 - 2850792 - | virulence-associated secretory protein spaI 2852508 - 2851213 - | ATP synthase SpaL TERM 3729 2851798 - 2851773 - G 72 -2.4 -4.91712 | overlap 2851774 TGGAATCGATAAAAA GCACGACCCG TTTTCC CTGGTCGCGA AAATATTCCGCTACG TERM 3730 2852439 - 2852459 + g 86 -7.5 -4.73105 | CCACATCGCGCAATT CCGCCTCAA TAA TTGGGCCGG TTATTTTTTGTGGGT spak 2852912 - 2852505 - | virulence-associated secretory protein TERM 3731 2852665 - 2852649 - G 78 -12.3 -3.21099 | CTCCCCCAGTAGTAA TTGCCCG CCG CGGGCAA AATGGCATCCTTCCA invA 2854993 - 2852936 - | secretory protein (associated with virulence) TERM 3732 2854592 - 2854568 - G 73 -5.5 -4.55689 | opp_overlap 2854569, overlap 2854569 ACCATCCAGAGAAAA TCGGGCCGCGA CTT CCGCGACGCGT TCTGAACCTTTGGTA invE 2856136 - 2855018 - | cell invasion protein invG 2857821 - 2856133 - | secretory protein (associated with virulence) invF 2858468 - 2857818 - | AraC family transcription regulator TERM 3733 2858378 - 2858366 - G 73 -5.5 -4.59853 | overlap 2858367 TTAACGGTCGAAAAA CCAGG TCT CCTGA TACTGGTGCGACAAC TERM 3734 2858420 - 2858436 + g 78 -6.5 -4.53034 | opp_overlap 2858393 AAAAAAGCAGCGCGC CTTCCTG AAT CAGGCAG TTTTCATTGTGTCGG TERM 3735 2858517 - 2858529 + H 76 -9.1 -3.66438 | overlap 2858509 CCATGCTTCCGGGCT GCGGA TTT TCCGC TTCTCTCCTTCTTTA TERM 3736 2859299 - 2859287 - g 79 -3.4 -5.16572 | opp_overlap 2859275 ACCGAATTTAAAAAA GTTC TACTT GAAC CCGGAAGTAAGAATT invH 2858924 - 2859367 + | cell adherance/invasion protein TERM 3737 2859519 - 2859537 + F 87 -10.3 -4.19311 | opp_overlap 2859506 2859521, overlap 2859521 ATCTGCTTTTTGATA CAGCAGC ACCTC GCTGCTG CTTTTTTTATTTGTG TERM 3738 2859521 - 2859538 + F 100 -7 -6.02919 | opp_overlap 2859506 2859521, overlap 2859519 CTGCTTTTTGATACA GCAGCA CCTCGC TGCTGC TTTTTTTATTTGTGA SPA2759 2859762 - 2859980 + | hypothetical protein SPA2760 2860250 - 2860531 + | hypothetical protein SPA2761 2860531 - 2861055 + | hypothetical protein TERM 3739 2862409 - 2862419 + T 79 -3.2 -5.44119 | overlap 2862407 GGTTCTTTCTGTTCA GGCA ATC TGTC TTTTTTTAAAATAAA SPA2764 2862793 - 2862608 - | hypothetical protein SPA2765 2863128 - 2862802 - | hypothetical protein TERM 3740 2864497 - 2864482 - g 90 -4.6 -5.40072 | overlap 2864484 CGTTGCGTAAAAAAA TGGGCG ATTT CGCCGA ACTGCGCGACCTCCT mutS 2863287 - 2865854 + | DNA mismatch repair protein TERM 3741 2865895 - 2865856 - T 100 -17.2 -3.5394 | gap 1, opp_overlap 2865847 2865861 2865894 AAAGTCTGGTGTAAA CGTGTCGGGCCCGATAGCG CCG CGTTATCGGGCCC-ACGCG CCAGCACAGGCTTTT SPA2767 2866224 - 2865910 - | hypothetical protein TERM 3742 2866140 - 2866130 - G 95 -8.2 -5.00616 | TGCGCCTGGAAAAAA GCGC CGA GCGC CGGATAATCCAGACA SPA2768 2867495 - 2866287 - | membrane transporter TERM 3743 2866418 - 2866431 + g 71 -9.5 -3.53224 | opp_overlap 2866404 2866418 CCTCAAGCGACATAA CGCGC TGGA GCGCG TTTAACAGCAGCGTC TERM 3744 2866431 - 2866418 - G 71 -9.5 -3.551 | opp_overlap 2866418, overlap 2866404 CCTCAAGCGACATAA CGCGC TGGA GCGCG TTTAACAGCAGCGTC TERM 3745 2866576 - 2866540 - G 73 -9.4 -3.7948 | GCAATAGTCAGGAAA GCGCCACTCTGCGCAG TACTG CTGCACAAACTGCCGC CAGCGCCCATTAAGG TERM 3746 2867591 - 2867567 - H 82 -13.1 -2.90075 | overlap 2867569 CGCGCTTCAACGATA TACTGTCAAAA TAA TTTTGACAGTA AAGGAGCTCGCCATG TERM 3747 2867589 - 2867569 - H 75 -11.3 -3.00298 | overlap 2867567 CGCTTCAACGATATA CTGTCAAAA TAA TTTTGACAG TAAAGGAGCTCGCCA TERM 3748 2867828 - 2867808 - g 72 -4 -4.72272 | gap 1 CTCTTTTACCAAAAA GGCG-TGAA TTTA CTCAACGCC GCGAAAAATTTGCAG SPA2769 2867604 - 2868515 + | LysR family transcriptional regulator SPA2770 2870053 - 2868557 - | permease TERM 3749 2869964 - 2869930 - G 81 -12.9 -3.02144 | gap 1, overlap 2869932 CCATTCCCCCCAACA GACCGGCGATGCAGGC CGCC GCCAGCATCGC-GATC AGCGCATGAACACGG SPA2771 2871000 - 2870050 - | hypothetical protein SPA2772 2871765 - 2871040 - | hypothetical protein ygbL 2872408 - 2871770 - | putative aldolase TERM 3750 2871947 - 2871932 - G 78 -6 -4.75372 | ATTAGCCAGTAAAAA GGCCTG ATGC CGGGCC GCCAGCGCTGCCAAA SPA2774 2873667 - 2872405 - | hypothetical protein ygbJ 2874584 - 2873661 - | 3-hydroxyisobutyrate dehydrogenase TERM 3751 2874677 - 2874691 + H 75 -2.9 -5.24129 | opp_overlap 2874677 2874680 TTGTTTCACAAAAAA TAACA AAATA TGTTA TTTTTTGTGAAGGCA TERM 3752 2874691 - 2874677 - H 75 -2.9 -5.24129 | opp_overlap 2874677, overlap 2874680 TTGTTTCACAAAAAA TAACA AAATA TGTTA TTTTTTGTGAAGGCA ygbI 2874781 - 2875545 + | DeoR family transcriptional regulator TERM 3753 2875550 - 2875563 + T 70 -9.5 -3.11459 | opp_overlap 2875550 2875546 2875545 2875543 CCAAACAATAGCGAA GCGGC GCAA GCCGC TTACGTCATCATCTT TERM 3754 2875563 - 2875550 - T 71 -9.5 -3.2661 | opp_overlap 2875550, overlap 2875546 2875545 2875543 CCAAACAATAGCGAA GCGGC GCAA GCCGC TTACGTCATCATCTT SPA2777 2875968 - 2875564 - | slyA-like protein SPA2778 2876139 - 2878160 + | hypothetical protein SPA2779 2878171 - 2878407 + | hypothetical protein TERM 3755 2878445 - 2878402 - T 100 -14.8 -4.27117 | opp_overlap 2878414, overlap 2878414 CTGGCAGAAGACAAA CGGTAAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTGACAA GGGTACTTACTCGCG TERM 3756 2878414 - 2878433 + T 100 -13.6 -5.40072 | opp_overlap 2878414 2878402 AAACGGTAAAAAAAA GGCCAGTC TGTC GACTGGCC TTTTTTTGACAAGGG TERM 3757 2878433 - 2878414 - T 100 -13.6 -5.82388 | opp_overlap 2878414, overlap 2878402 AAACGGTAAAAAAAA GGCCAGTC TGTC GACTGGCC TTTTTTTGACAAGGG rpoS 2879444 - 2878452 - | RNA polymerase sigma factor RpoS nlpD 2880640 - 2879507 - | lipoprotein NlpD TERM 3758 2879971 - 2879985 + g 73 -5 -4.6635 | overlap 2879962 CCGTCCCAGCAGGCT TGTTGT TTG GCAACA TTTTGTTAGCACTTT pcm 2881442 - 2880816 - | protein-L-isoaspartate O-methyltransferase TERM 3759 2880895 - 2880879 - G 77 -7.9 -4.33417 | overlap 2880880 GGTATCGATAATAAA TTCGCCG CCC CGGCGAC GCACGCGTTTCAAAA TERM 3760 2880894 - 2880880 - G 74 -11.4 -3.19568 | overlap 2880879 GTATCGATAATAAAT TCGCCG CCC CGGCGA CGCACGCGTTTCAAA surE 2882197 - 2881436 - | stationary phase survival protein SurE truD 2883227 - 2882178 - | tRNA pseudouridine synthase D TERM 3761 2882258 - 2882245 - G 77 -8.1 -4.07687 | ACGCTGGTGGCAAAA CTGCC TGCG GGCAG CCAGAAACGTAACTC TERM 3762 2882669 - 2882682 + g 71 -9.5 -3.51232 | overlap 2882666 TGCGTTTATTGCGAT CGCGC ACCG GCGCG TTACTTTGCGCCCAG ispF 2883703 - 2883224 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 2884413 - 2883703 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 3763 2884022 - 2884036 + g 70 -7 -4.21194 | opp_overlap 2884022, overlap 2884005 2884024 GGACTGGCGAGGATA CCGCCG ACC CGGCTG TTTTCGCTGATGGCC ftsB 2884743 - 2884432 - | cell division protein FtsB TERM 3764 2884822 - 2884851 + r 81 -12.3 -3.12351 | gap 1, opp_overlap 2884822 2884823, overlap 2884823 GGATTGCCGCGACAA CG-CCGGCAAATGT ACC ACATTTGCCGGATG TTACGTATACCCGAG TERM 3765 2884850 - 2884822 - R 74 -10.3 -3.29144 | opp_overlap 2884822 2884823, overlap 2884823 GGATTGCCGCGACAA CGCCGGCAAATGT ACC ACATTTGCCGGAT GTTACGTATACCCGA TERM 3766 2884823 - 2884849 + r 86 -13.8 -3.12327 | opp_overlap 2884822 2884823, overlap 2884822 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 3767 2884849 - 2884823 - R 83 -13.8 -2.57344 | opp_overlap 2884823 2884822, overlap 2884822 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 3768 2884973 - 2884958 - R 72 -8.2 -3.78034 | TAGCCATATGAATAA CGCGCC GAAC AGCGCG CCTACGGCCAGTAGA ygbE 2885257 - 2884934 - | hypothetical protein cysC 2885913 - 2885308 - | adenylylsulfate kinase cysN 2887339 - 2885900 - | sulfate adenylyltransferase subunit 1 TERM 3769 2886137 - 2886085 - G 70 -2.8 -4.82901 | gap 2, opp_overlap 2886093, overlap 2886088 2886089 GTCGGTCGATAAAAA TCAGCCCGCCCGTCACCGGATTTT GCTGATA AATATCCAGCG-CGAGC-GGCTCA TCGAATGTCATCTCT TERM 3770 2886475 - 2886459 - G 71 -5.8 -4.25104 | overlap 2886468 TTGTCGCCATCAAAA GTGACG ATACG CGCCAC GCTGGATTCCACGCC cysD 2888257 - 2887349 - | sulfate adenylyltransferase subunit 2 TERM 3771 2889750 - 2889784 + r 74 -3.5 -4.93877 | gap 1, opp_overlap 2889780, overlap 2889752 CGCAATACCGTGCTG TCCGGTTTATCCCCGC TGGC GCGGGGA-ACACAGCA TTTTCTTTGCTGGCC ygbF 2890280 - 2889987 - | hypothetical protein SPA2794 2891200 - 2890310 - | hypothetical protein SPA2795 2891904 - 2891200 - | hypothetical protein TERM 3772 2891755 - 2891743 - G 90 -4.7 -5.34555 | opp_overlap 2891743 CGAGAGCATAAAAAA GCCGC CAT GCGCC TCTTCGCGAAACAGA SPA2796 2892629 - 2891904 - | hypothetical protein TERM 3773 2892060 - 2892044 - G 75 -6.6 -4.45738 | CATCCCAATAACAAA TACCCT TACGC AGGGTA AATCCACTTAATTCC SPA2797 2893697 - 2892639 - | hypothetical protein SPA2798 2894322 - 2893720 - | hypothetical protein TERM 3774 2893852 - 2893842 - G 74 -6.8 -4.3586 | CCATCCACAGGAAAA TGCC ATC GGCA AGTGAAAGAACATTC TERM 3775 2893919 - 2893935 + g 71 -4.3 -4.58283 | opp_overlap 2893910 2893909 AACAACTGGCAAAAT GTTTCCG GGT CGGACGC TTTTTGCAAACGTTC TERM 3776 2894158 - 2894168 + g 70 -6.8 -4.19746 | TATCATTACGCCATA TGGC GGC GCCA TTCTTTTCAACTCAG TERM 3777 2894873 - 2894883 + H 74 -5.4 -4.68705 | GGCACGAACGACCTT TGCA GGC TGCA TTTTGTTGAACTTAT TERM 3778 2897373 - 2897355 - H 77 -8.9 -3.85817 | ACGGTGGGCGAGAAA TGTCGGA CTCTT TCCGACA ATCCATCTGGCAGCC TERM 3779 2898814 - 2898790 - H 76 -2.2 -5.40474 | gap 1, overlap 2898791 ATGGTGGCAAAAAAA TTCTGGTACAT TCCA ATGT-CCAGAT GAGGAAACATTAGCC sopD 2899311 - 2900264 + | hypothetical protein TERM 3780 2900294 - 2900310 + T 89 -9.4 -4.72272 | opp_overlap 2900294 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTTCATAGCAGCA TERM 3781 2900310 - 2900294 - T 83 -9.4 -4.32804 | opp_overlap 2900294 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTTCATAGCAGCA cysH 2901086 - 2900352 - | phosphoadenosine phosphosulfate reductase TERM 3782 2900614 - 2900643 + g 76 -10 -3.81137 | gap 1, opp_overlap 2900590, overlap 2900637 CTACCGGACTGCTCG CGACGCAGACCCG CAAAC CAGGTCTGCG-CG TTTAACTCTTTGAGC cysI 2902874 - 2901162 - | sulfite reductase subunit beta TERM 3783 2901913 - 2901946 + g 73 -10.3 -3.41795 | overlap 2901912 2901910 2901914 CGACGCTCAACTTCT TCTTTGAACGTGTCG ACAC CGACGCGCTCAAGGG TATATTTGGTTTTGG cysJ 2904673 - 2902874 - | sulfite reductase subunit alpha ptpS 2905109 - 2905471 + | putative 6-pyruvoyl tetrahydrobiopterin synthase TERM 3784 2906784 - 2906794 + T 89 -4 -5.67283 | opp_overlap 2906784 TTGATGCAAAAAAGT TCAT AGA ATGA TTTTTTCTTTAAATT ygcF 2907632 - 2906961 - | hypothetical protein TERM 3785 2907035 - 2907047 + g 80 -9.1 -4.09519 | opp_overlap 2907035 ACGTTTCAATACACA GACGC GTC GCGTC TTCTTTCTGGCTAAT TERM 3786 2907579 - 2907563 - G 78 -2.2 -5.24551 | GTAAACGAATAAAAA TAGCGG GGACG CCGGTA AAGTAACCCTCGCCT TERM 3787 2907727 - 2907740 + r 100 -9.5 -4.74103 | opp_overlap 2907727 ACCGATACAAAAAAA CCCGC CGAA GCGGG TTTTTACGTTAAGAG TERM 3788 2907740 - 2907727 - R 100 -9.5 -5.72616 | opp_overlap 2907727 ACCGATACAAAAAAA CCCGC CGAA GCGGG TTTTTACGTTAAGAG eno 2909066 - 2907768 - | phosphopyruvate hydratase TERM 3789 2909134 - 2909111 - R 100 -13.9 -4.08164 | opp_overlap 2909109 2909108 AAAACTTCAGACAAA CGGTGCACC GCTGAG GGTGCACCG CCGTTCTAACTTTTT pyrG 2910786 - 2909149 - | CTP synthetase mazG 2911814 - 2911014 - | nucleoside triphosphate pyrophosphohydrolase TERM 3790 2911412 - 2911427 + g 87 -8.2 -4.57073 | opp_overlap 2911396, overlap 2911415 2911421 GCGGAATATCGTCCA GCGCGG AATG CTGCGC TTTTTGCGCGCGCTC TERM 3791 2912172 - 2912191 + H 91 -8 -5.24129 | CGCCAGTTTAATATT CAAAAAAG ACCG CTTTTTTG TTTTTTCTGAAACAC steA 2912423 - 2913010 + | putative fimbrial subunit TERM 3792 2913026 - 2913071 + F 74 -5.4 -4.63932 | opp_overlap 2913037, overlap 2913037 TTCAGTTAACAGAGT CACGACGATAATACCCTGCC GCTTTA GGTAGGGTATTCCTGTTGAG TTTTATTGCGGAATA TERM 3793 2913037 - 2913060 + F 70 -8.9 -3.41203 | opp_overlap 2913037, overlap 2913026 GAGTCACGACGATAA TACCCTGCC GCTTTA GGTAGGGTA TTCCTGTTGAGTTTT steB 2913144 - 2915789 + | outer membrane usher protein TERM 3794 2915961 - 2915951 - g 71 -4.6 -4.59773 | overlap 2915952 CGTCACGCTGAAAAA CGGC AAC GCCA CTCTGCCCTATCTCG steC 2915802 - 2916575 + | periplasmic fimbrial chaperone steD 2916601 - 2917101 + | fimbrial subunit steE 2917116 - 2917586 + | fimbrial subunit steF 2917583 - 2918119 + | fimbrial subunit SPA2818 2918178 - 2919296 + | hypothetical protein SPA2819 2919903 - 2920733 + | hypothetical protein SPA2820 2921729 - 2921442 - | hypothetical protein relA 2924116 - 2921882 - | GDP/GTP pyrophosphokinase TERM 3795 2923022 - 2923039 + g 77 -8.3 -4.1523 | opp_overlap 2923021, overlap 2923020 ATGGCCGGAACGCAC GCCGCCG GACG CGGCGCC TTCTTTATACTTCCA TERM 3796 2924161 - 2924135 - R 73 -10.9 -2.52464 | gap 1, opp_overlap 2924132 CCTCTCCTTAAGGGA CCAGGCCTACCG AAGT CGGTAAGCC-GG TAATCATTACATGCG rumA 2925463 - 2924168 - | 23S rRNA 5-methyluridine methyltransferase TERM 3797 2926062 - 2926073 + G 85 -2.2 -5.47159 | AGATTTTTATCTCCA GCGT GATG ATGC TTTTTTGTATTGGCA TERM 3798 2926393 - 2926372 - g 71 -4.3 -4.57569 | opp_overlap 2926373, overlap 2926373 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAGTCGGAGTTC barA 2925521 - 2928277 + | hybrid sensory histidine kinase BarA SPA2824 2929463 - 2928321 - | hypothetical protein TERM 3799 2929511 - 2929536 + r 80 -13.3 -2.52464 | opp_overlap 2929511 2929514 CATACACCCAGAGAA GAACCGGTTCC TTAC GGAACCGGCTC TGACTTAACGCACCA TERM 3800 2929536 - 2929511 - R 100 -15.5 -3.54436 | opp_overlap 2929511, overlap 2929514 CATACACCCAGAGAA GAACCGGTTCC TTAC GGAACCGGCTC TGACTTAACGCACCA TERM 3801 2929533 - 2929514 - R 100 -13.6 -3.90092 | opp_overlap 2929511, overlap 2929511 ACACCCAGAGAAGAA CCGGTTCC TTAC GGAACCGG CTCTGACTTAACGCA ygcX 2930878 - 2929541 - | glucarate dehydratase 1 TERM 3802 2931938 - 2931926 - R 86 -9.1 -4.46757 | AAGATATCGACAAAA CCCTG CAA CAGGG TGAAGACTGACCAAA TERM 3803 2932400 - 2932386 - R 80 -5.6 -5.01535 | GGAGAAGTATAAAAA GCGCGC CAC ACACGC TCACCGTGCAACAAC TERM 3804 2932514 - 2932499 - R 72 -10.4 -2.78901 | overlap 2932498 AAATGAAATCAGAAG GCGTCG GCGT CGACGC AGGAGGAGTAAAAAG TERM 3805 2932686 - 2932705 + r 72 -10.7 -2.78679 | opp_overlap 2932686 2932683, overlap 2932685 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA TERM 3806 2932705 - 2932686 - R 72 -10.7 -2.82666 | opp_overlap 2932685 2932686, overlap 2932683 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA SPA2827 2933162 - 2932713 - | flavodoxin yqcB 2933963 - 2933181 - | tRNA pseudouridine synthase C yqcC 2934292 - 2933963 - | hypothetical protein TERM 3807 2934212 - 2934198 - G 93 -11.4 -4.41348 | GTGCTGGTAAACAAA TGCGCC TGC GGCGCA TCCAGCCGCCAGTGG TERM 3808 2934339 - 2934368 + r 79 -10.7 -3.51411 | opp_overlap 2934341, overlap 2934335 2934340 AAGAATAACAAAAAA AAGGGAGCACTGT ATAA ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 3809 2934340 - 2934367 + r 83 -14.2 -2.70525 | opp_overlap 2934341, overlap 2934339 2934335 AGAATAACAAAAAAA AGGGAGCACTGT ATAA ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 3810 2934366 - 2934341 - R 100 -17.7 -6.22691 | opp_overlap 2934340 2934339 2934335 GAATAACAAAAAAAA GGGAGCACTGT ATAA ACAGTGCTCCC GGTTCGTTTCGCAGC syd 2935448 - 2934903 - | SecY interacting protein Syd queF 2935517 - 2936365 + | 7-cyano-7-deazaguanine reductase TERM 3811 2937209 - 2937198 - g 72 -3.6 -4.70659 | CCGGATATCGAAAAA CGCC TAGA AGCG TTCGTCCGTATCGCA TERM 3812 2937511 - 2937494 - g 71 -8.4 -3.86372 | GCAAGTGAAAGAGAA TCGCCG CGATAC CGGCGA CGCCTATAGTTTTAA ygdH 2936508 - 2937842 + | hypothetical protein TERM 3813 2937848 - 2937876 + F 77 -10.2 -3.3858 | overlap 2937849 2937871 CTGCGCTTAACGCTT ATGCCCGGTTGC CGCCA GCAGCCGGGCGC TTCTCCCATTCCTTT TERM 3814 2937849 - 2937875 + F 83 -13.7 -2.62425 | overlap 2937848 2937871 TGCGCTTAACGCTTA TGCCCGGTTGC CGCCA GCAGCCGGGCG CTTCTCCCATTCCTT sdaC 2938407 - 2939696 + | putative serine transporter TERM 3815 2939705 - 2939723 + F 90 -13.1 -3.61902 | CAGCTAAGTCCTTTA GCGCCGC TTACC GCGGCGC TTCTCTATGATACAA TERM 3816 2939862 - 2939827 - g 83 -10.4 -3.95584 | GTCGGACCAATGAAA GCAGGCAAGCAGTTCA CGGA CGATCTGATTGCCCGC CATATCCTTACAGAT TERM 3817 2940381 - 2940361 - g 86 -11.9 -3.83026 | overlap 2940364 GCTCTGCACAGTAAA GAAGCGCTG GAG CAGCACTTC GCCAGGGTCTGGGAG TERM 3818 2940378 - 2940364 - g 71 -7.8 -4.04806 | overlap 2940361 CTGCACAGTAAAGAA GCGCTG GAG CAGCAC TTCGCCAGGGTCTGG TERM 3819 2940534 - 2940510 - g 95 -14.3 -3.4252 | GGTCAGTCAGGATAA GACCACCACCG ATC CGATGGCGGTC GTCGACTGGATCAAT sdaB 2939755 - 2941122 + | L-serine dehydratase 2 (L-serine deaminase 2) TERM 3820 2941149 - 2941177 + F 82 -7.5 -4.69053 | gap 2, opp_overlap 2941158, overlap 2941166 TTTTAGGATCTGTAG GCCGGATAAGGCG CTCGC CGCC--ATCCGGC TTTTGTTGCCTGATA xni 2941293 - 2942048 + | exonuclease IX TERM 3821 2942031 - 2942048 + T 74 -5.5 -4.63932 | opp_overlap 2942025 GGAAACTTACAGCAG CTACGGC TGGT GCGGTAG TTTTGTTGCCGGATG fucO 2943288 - 2942140 - | L-1,2-propanediol oxidoreductase fucA 2943952 - 2943305 - | L-fuculose phosphate aldolase TERM 3822 2944318 - 2944305 - H 70 -5.3 -4.38116 | overlap 2944316 TTTATAAAAATTAAA GTGAT GATA ATCAC AGAACGCTATGCTCT TERM 3823 2944692 - 2944708 + G 74 -2.9 -4.94962 | CTAACTTTCAGGCCG GGCTTAT TCA GTCAGCC TTTTATTTCGGTTAT TERM 3824 2944737 - 2944748 + G 71 -5.8 -4.25104 | overlap 2944743 ATTTCGTCATTCCAA TCCC CGCT GGGA TTTTGATGAAAAAAC fucP 2944508 - 2945818 + | L-fucose transporter TERM 3825 2945871 - 2945860 - g 85 -2.2 -5.52384 | overlap 2945861 2945863 CTGTCATGAAAAAAA TCAG CTTA CCGA AAATCGGTATCCGCC TERM 3826 2946345 - 2946324 - g 74 -2.2 -5.07486 | gap 1 GACGTCGAAGAAAAA CTG-CTGCG TTTTG CGCGGGCAG GGTTAGCGGTTGCCA TERM 3827 2946576 - 2946560 - g 70 -3 -4.82901 | gap 1, overlap 2946562 GTGGGCGGATAAAAA CTTCCGC TACG GCG-AAG ATCAAAACGCCTCGC fucI 2945850 - 2947625 + | L-fucose isomerase fucK 2947726 - 2949144 + | L-fuculokinase TERM 3828 2949444 - 2949472 + G 71 -5.9 -4.36914 | TAGAAGCGCCGTGCC CGGATATCGTTCG TAT CGACCGCTATGCG TTTTATGAGCGGGCG fucU 2949146 - 2949568 + | fuscose operon fucU protein TERM 3829 2949564 - 2949554 - f 76 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CGCC GTAATCTCTTGCCGG TERM 3830 2949582 - 2949600 + F 83 -13.1 -3.17212 | AATCTCTTGCCGGTG CGCCCGC ATGAC GCGGGCG TTCATCGAATGATGG fucR 2949626 - 2950336 + | DNA-binding transcriptional activator FucR TERM 3831 2950345 - 2950391 + T 100 -10.9 -4.88736 | gap 2, opp_overlap 2950346, overlap 2950346 GTCATAGGCCGGACA AGCG-TGC-GCCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGCG TTTTTATCGCTCGTC TERM 3832 2950390 - 2950346 - T 100 -16.6 -3.30771 | gap 2, opp_overlap 2950346 2950345 TCATAGGCCGGACAA GCG-TGC-GCCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT TERM 3833 2950346 - 2950390 + T 95 -14.4 -3.52519 | gap 2, opp_overlap 2950346, overlap 2950345 TCATAGGCCGGACAA GCG-TGC-GCCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT ygdE 2951495 - 2950395 - | putative RNA 2'-O-ribose methyltransferase ygdD 2951883 - 2951488 - | hypothetical protein TERM 3834 2951855 - 2951843 - G 100 -9.1 -4.94058 | overlap 2951845 GCAACGTAAATAAAA CCGCT GAT AGCGG CGACAATCAGCATAA gcvA 2952819 - 2951902 - | DNA-binding transcriptional activator GcvA TERM 3835 2952259 - 2952275 + g 83 -7.9 -4.67168 | overlap 2952274 CAATAACGTGTGTTT CGCCAGA TCT TCCGGCG TTTTTAACGGTTTTT TERM 3836 2952793 - 2952783 - G 74 -4.6 -4.77036 | opp_overlap 2952783 CGGCAGCATCAAAAA CGCG TAA CGCA TTTAAAGGAGGTAAT TERM 3837 2952851 - 2952879 + r 100 -7.5 -5.58454 | opp_overlap 2952851 2952855 GTCGAATGAATTTAA CAAATAGGTAACA ATA TGTAACCTATTAG TTTTTTTAATCTGAG TERM 3838 2952875 - 2952855 - R 74 -6.9 -4.26953 | opp_overlap 2952851, overlap 2952851 AATGAATTTAACAAA TAGGTAACA ATA TGTAACCTA TTAGTTTTTTTAATC TERM 3839 2953144 - 2953125 - R 70 -10.7 -2.57423 | opp_overlap 2953125 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC TERM 3840 2953125 - 2953144 + r 100 -10.7 -6.02914 | opp_overlap 2953125 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC ygdI 2953393 - 2953166 - | lipoprotein TERM 3841 2953847 - 2953833 - g 78 -2.1 -5.14563 | CGCCCGATGAAAAAA GTATC GTCTG GACAC GCGGCACCACCGAAG csdA 2953586 - 2954791 + | cysteine sulfinate desulfinase ygdK 2954791 - 2955234 + | hypothetical protein TERM 3842 2955749 - 2955769 + G 76 -3.3 -4.99645 | GATCGCCGGACTTTT GATGATTGT CTC ATGGTCATC TTTTATTTATGCGCT SPA2851 2955507 - 2956421 + | hypothetical protein ygdL 2957279 - 2956473 - | hypothetical protein TERM 3843 2956976 - 2956989 + g 71 -9.5 -3.51708 | overlap 2956973 CATCGATAACGGTTA CCCGG CACT CCGGG TTAATTTGACGAATC TERM 3844 2957186 - 2957210 + g 78 -7 -4.59773 | opp_overlap 2957185 CCACGACGCAGATAT GCGCCTCAGC AAACC GCTGCAGCGC TTTTTCACCGTACAG TERM 3845 2957318 - 2957300 - R 100 -10.3 -5.88565 | CTCAGAATAAAAAAA GGTGAGG TTATT CCTCACC CCTACTCACTATTTT TERM 3846 2957411 - 2957423 + r 78 -6.2 -4.56597 | opp_overlap 2957392, overlap 2957411 2957410 CTAAACACGTTACCG GCGC CCGGC GCGC TTTTTAACACCCAGA mltA 2958486 - 2957389 - | murein transglycosylase A TERM 3847 2958027 - 2958048 + g 77 -8 -4.08945 | gap 1 CTGCGTAGATCTGAG CGCGGGACG GTAAA CGTCC-GCG TTTTGGCGGCATACT TERM 3848 2958397 - 2958414 + g 84 -9.1 -4.25104 | CCCGTCCTTATATTG CTGACCG CGAT CGGTCGG TTTTGATGAACAGGC TERM 3849 2958887 - 2958900 + r 100 -8.1 -5.77988 | opp_overlap 2958887 AACCAACTTAATGAA CACCC TTAC GGGTG TTTTTTTGTATCTGT amiC 2960242 - 2958989 - | N-acetylmuramoyl-L-alanine amidase TERM 3850 2960392 - 2960380 - H 78 -5.5 -4.73613 | GCATTACTAAGAAAA GCGAT CGG ACCGC ATAAAATTTACGCTT argA 2960475 - 2961806 + | N-acetylglutamate synthase TERM 3851 2961886 - 2961874 - T 70 -9.1 -3.30124 | TTGGAGGCCGGATAA GACGC TGC GCGTC GCCATCCGGCGAGAA RecD 2963743 - 2961908 - | exonuclease V subunit alpha TERM 3852 2962655 - 2962671 + g 74 -10.1 -3.6692 | opp_overlap 2962654, overlap 2962653 GCCGATGCCAGAATC GCTGCCG AAA CGGTAGC TCTTTTGCAATAAAC TERM 3853 2962887 - 2962867 - G 76 -3.2 -5.07486 | gap 1, overlap 2962870 2962871 GATCGCCAAGAAAAA TGAC-CCGC CCGT GCGGCGGCA GAGCGTCAATCAAAC TERM 3854 2963398 - 2963381 - G 76 -3.3 -5.01732 | opp_overlap 2963381, overlap 2963383 AACCTCGTTAAAAAA GCGCGCA ACCG TACGCTC GTTGCACCACATGCG RecB 2967285 - 2963740 - | exonuclease V subunit beta TERM 3855 2963985 - 2963968 - G 72 -11.3 -3.01497 | GTACTGCAAATCATA GCGATGC GCCT GCATCGC CGCAGCCATCGCCGT TERM 3856 2966244 - 2966256 + g 74 -4.7 -4.72272 | CGTCAAACCCCAGCT CGCCG CGC CGTCG TTTTTCCTGAGCCAC TERM 3857 2966367 - 2966388 + g 83 -12.3 -3.74693 | gap 1 CGACAAACAATGGGT GCTGG-GGCG TCA CGCCGCCAGC TTTGGTGCGCTCAGC TERM 3858 2966432 - 2966411 - G 82 -5.1 -5.08824 | opp_overlap 2966426, overlap 2966423 CGCTCAGCTAAAAAA CGCTGTGAA AATT TTCCCAACG CCTCGGGTAATTGAT ptr 2970166 - 2967278 - | protease III precursor (pitrilysin) TERM 3859 2968825 - 2968835 + g 81 -6.8 -4.72272 | TCTGCGGCGTCATCA TCGC CAG GCGA TTTTTGATAGCGGCA TERM 3860 2969851 - 2969866 + g 100 -7.6 -5.40474 | overlap 2969842 GGTATTCGGCAAGGC TATCCG CCTG CGGATA TTTTTTTGACCCCAT TERM 3861 2970251 - 2970267 + r 88 -3.7 -5.64274 | AACGGGATATTATTG TGCTG AACCAGG CAGCA TTTTTTTATCAGTAA recC 2973715 - 2970344 - | exonuclease V subunit gamma TERM 3862 2970736 - 2970724 - G 73 -9.1 -3.90048 | overlap 2970722 CTTTGCGCAAAAACA GGCGA CTT TCGCC ACTCCCGCCGCTGGC TERM 3863 2970796 - 2970778 - G 74 -9.6 -3.64703 | overlap 2970760 GGTGTTCCAGCCAAA GTTGCACA CCT TGCGCAAC GCTGATTAAAGCGGG TERM 3864 2972437 - 2972413 - G 72 -12.1 -2.60823 | overlap 2972417 AAATGGCATAAGGCA GATAGCGCTCC GTT GGCGCGCTACC AAATACCGCCTGGAT TERM 3865 2972743 - 2972759 + g 70 -6.5 -4.19506 | opp_overlap 2972742 2972743 2972745, overlap 2972746 TAATATCAACAAACG CATCCAG CTC CTGGCTG TTTTCCAGTTCAGAT TERM 3866 2973544 - 2973534 - G 74 -6.8 -4.27316 | GCCGGTAACGGAAAA GCGA TAT TCGC CGCAATACCAAACTT ppdC 2974051 - 2973731 - | hypothetical protein ygdB 2974443 - 2974036 - | hypothetical protein TERM 3867 2974321 - 2974296 - G 80 -11.8 -3.32844 | opp_overlap 2974282 GCGCCGACTGCACAA GCGCCTGGCG TTGTAT CGCCAGGCTC TGCGTCGTCACGCGG ppdB 2975003 - 2974440 - | hypothetical protein ppdA 2975464 - 2974994 - | hypothetical protein TERM 3868 2975170 - 2975138 - G 83 -14.9 -2.77569 | overlap 2975130 2975129 2975163 AAAGAAGGCTAACGA CGGCGTGATATCGGC AAG GACGACATCACGCCA GTCGGGCGTAAACAC TERM 3869 2975627 - 2975608 - R 93 -7.1 -5.81032 | opp_overlap 2975608 GAAGGGTAAAAAAAA CCGACGC GCGATG ACGTCGG TTATGGCAGGATCGT thyA 2976443 - 2975649 - | thymidylate synthase TERM 3870 2976021 - 2976000 - G 76 -5.1 -4.75063 | gap 1, opp_overlap 2976009 2976010 ATAAAACTGGAAAAA GGCG-TGACA CGG CGCCAGCGCC ATCTTATCCAGCTCG lgt 2977325 - 2976450 - | prolipoprotein diacylglyceryl transferase TERM 3871 2976951 - 2976940 - G 71 -4.4 -4.64334 | AACGGCGCAATAAAA TCAG ACAC CTGA AAGAACGAGCGCTTC TERM 3872 2977397 - 2977377 - R 73 -10.4 -2.954 | overlap 2977376 TAGCGATCGATAAAC GCGCCTGC GCGTT GCAGACGC TCCAAAGGTGCGAAT ptsP 2979988 - 2977742 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein TERM 3873 2979300 - 2979268 - G 71 -6.1 -4.26589 | opp_overlap 2979295 2979297 AGTACAGATCGAAAA TGGCCGCCGTCTC TTTTTGC GCGCCGGCGGCAA AGCGTTTGCTGTATC ygdP 2980531 - 2980001 - | dinucleoside polyphosphate hydrolase mutH 2981214 - 2981909 + | DNA mismatch repair protein TERM 3874 2982451 - 2982439 - g 71 -7.7 -3.97139 | opp_overlap 2982438 GAAGGCGAAGAAGAA GGGTT AAA AACCC GGGTTTCTTCTTTCC ygdQ 2982091 - 2982804 + | hypothetical protein ygdR 2982974 - 2983192 + | lipoprotein TERM 3875 2983473 - 2983463 - g 71 -4.6 -4.63486 | overlap 2983465 ATTTGGTGAACAAAA CAGC GAA GCCG ACGCTCACGCACAGC TERM 3876 2984209 - 2984199 - g 72 -2.4 -4.91459 | overlap 2984201 GAACAGGCACAAAAA GCCG TTG CCGC CTACGTCGATATCGC tas 2983383 - 2984423 + | putative aldo-keto reductase ygeD 2985712 - 2984510 - | hypothetical protein TERM 3877 2985023 - 2985006 - G 79 -7.7 -4.49311 | gap 1, overlap 2985010 AGCACCAGCAGAAAA CGCA-GCG TCA CGCCTGCG CCCCAGAATAGCCCG aas 2987864 - 2985705 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 3878 2986106 - 2986116 + g 77 -8.2 -4.07568 | AGCCGCGCTCAGTTT CGCC TCT GGCG TTTTCCGCCGACGGC TERM 3879 2987980 - 2987963 - H 100 -12.7 -5.75945 | opp_overlap 2987963 AGGTTCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3880 2987963 - 2987980 + H 81 -12.7 -3.14132 | opp_overlap 2987963 AGGTTCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3881 2988360 - 2988338 - g 74 -7.6 -4.10429 | overlap 2988325 AACGATTCGCCAAAA GCCAGCGAAG CGT CCCGGCTGGC GGTGACCAGCGCAAT galR 2988257 - 2989285 + | DNA-binding transcriptional regulator GalR TERM 3882 2989419 - 2989390 - g 74 -4.3 -4.68908 | gap 1 GGCAGGTAAAAGAAA GCACGCGCCAGAAA GTG TTTACGGCG-ATGC AGGCTCTGGACTATC TERM 3883 2990276 - 2990297 + G 74 -2.1 -5.03314 | overlap 2990277 CACGCTCATTCTGCG TGAGTCCGT CTCC GCGGGCCCG TTTTTTCAACGTCCG SPA2879 2989299 - 2990318 + | regulatory protein lysA 2991590 - 2990328 - | diaminopimelate decarboxylase lysR 2991708 - 2992643 + | DNA-binding transcriptional regulator LysR ygeA 2993295 - 2992615 - | putative racemase araE 2994850 - 2993435 - | L-arabinose isomerase TERM 3884 2994014 - 2994004 - G 78 -6.8 -4.62069 | overlap 2993987 CGGCCATTTTAAAAA TGCG CGG CGCA TAATACATAATGATG TERM 3885 2995142 - 2995125 - R 93 -7 -5.69473 | opp_overlap 2995124 2995125 GAGATCATAAAAAAA CCCTGT ACGAGG ACAGGG CTTTATCAGTTTTTT kduD 2995965 - 2995204 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 3886 2995310 - 2995279 - G 71 -10.9 -3.16564 | GCTGGATGCCAGGAA GACTACCGGGC CCATTAAATC GCCCGGTAGCC CCCAACGTCCAGCCG TERM 3887 2995815 - 2995793 - G 76 -2.7 -5.03314 | overlap 2995796 GTCAGGCTTAAAAAA CGACGTC-CCA GAG CGGTGACG-CG CGCAATAGTTTCCGT kduI 2996858 - 2996022 - | 5-keto-4-deoxyuronate isomerase TERM 3888 2996914 - 2996898 - R 81 -8.1 -4.42788 | opp_overlap 2996898 CGCAATGGCATAAAA TCAAAAC ACC GTTTTGA TTTATTTAACGGCAT TERM 3889 2996898 - 2996914 + r 81 -8.1 -4.41616 | opp_overlap 2996898 CGCAATGGCATAAAA TCAAAAC ACC GTTTTGA TTTATTTAACGGCAT TERM 3890 2997223 - 2997240 + r 88 -8.4 -4.83169 | TCTGTCACTGGCTTT GCCCTC GTGATA GAGGGC TTTTTATGACGGAAT yqeF 2998466 - 2997288 - | acetyl-CoA acetyltransferase TERM 3891 2997649 - 2997636 - G 71 -9.5 -3.54424 | overlap 2997637 GCCGACGCTGGCAAA CGCGC GGAT GCGCG CCAGCACCGGCAACC TERM 3892 2997801 - 2997765 - G 71 -8.6 -3.89412 | gap 1, opp_overlap 2997794 ACCTAAACTATCAAA CGCCGGATGCAGCAGGG CTAA CCCCTCCGCA-CTGGCG TCGGCCCGCGGTTGT TERM 3893 2998554 - 2998541 - R 76 -2.4 -5.41143 | GATTGTTTAAAAAAA GTGA GTTTTA TCAC AAAGGAAATGACGCT SPA2887 2999452 - 2998589 - | regulatory protein TERM 3894 2998697 - 2998711 + g 73 -5.6 -4.56597 | overlap 2998699 CCAGCCAGGAACATC CAGCTG CGC CAGCGG TTTTTCCGCCGCAAA SPA2888 2999529 - 3000011 + | hypothetical protein SPA2889 3000153 - 3001382 + | amino acid ABC transporter TERM 3895 3001417 - 3001390 - T 90 -9.9 -4.54727 | opp_overlap 3001392, overlap 3001392 TCGGCTAAAGTAAAA GATAGCCGGGA TATAAC TCCCGGCTATT TTATATAAGAATCCA TERM 3896 3001392 - 3001415 + T 100 -12.5 -4.53303 | opp_overlap 3001390 3001392 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC TERM 3897 3001415 - 3001392 - T 95 -12.5 -3.88396 | opp_overlap 3001392, overlap 3001390 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC yohL 3001685 - 3001413 - | hypothetical protein TERM 3898 3002422 - 3002446 + G 74 -8.5 -3.93038 | GCTTAAAGCGTTTAC GCTGGGCGCCA CGA TGGTGCTGAGC TTTAGTCTTAGCCTG yohM 3001811 - 3002635 + | nickel/cobalt efflux protein RcnA SPA2892 3003608 - 3002850 - | hypothetical protein SPA2893 3004107 - 3003595 - | hypothetical protein SPA2894 3005319 - 3004252 - | hypothetical protein TERM 3899 3004312 - 3004325 + g 74 -9.5 -3.73088 | TGTCTTTACACTTCC CCCCG GGGT CGGGG TTATTACTGCAGTAT stdC 3006059 - 3005316 - | fimbrial chaperone protein stdB 3008589 - 3006100 - | outer membrane fimbrial usher protein TERM 3900 3008679 - 3008654 - R 72 -4.7 -4.60797 | opp_overlap 3008654 TGGTCAGATATAAAA GCCGTCC GAACCCCTCTGT GGACGGC TTCTCCCTGTCGTTA stdA 3009293 - 3008709 - | fimbrial protein SPA2898 3010643 - 3010011 - | hypothetical protein TERM 3901 3011826 - 3011802 - R 93 -9.9 -4.60258 | opp_overlap 3011805, overlap 3011804 3011805 CCAGGAAACAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 3902 3011824 - 3011804 - R 95 -12.5 -3.89937 | opp_overlap 3011805, overlap 3011802 3011805 AGGAAACAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 3903 3011823 - 3011805 - R 93 -16 -2.92335 | opp_overlap 3011805, overlap 3011804 3011802 GGAAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 3904 3011805 - 3011823 + r 100 -16 -4.91109 | opp_overlap 3011804 3011802 3011805 GGAAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 3012363 - 3011905 - | transposase for insertion sequence element IS200 TERM 3905 3012476 - 3012494 + r 100 -16 -4.18018 | opp_overlap 3012466 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 3906 3012534 - 3012514 - R 100 -11.9 -5.76633 | opp_overlap 3012517 CCATAGACAAAAAAA GAAGGGAGC GGT ACTCCCTTC GTAAACATGTCAGAA SPA2901 3013142 - 3012744 - | plasmid maintenance protein TERM 3907 3013039 - 3013013 - G 83 -12.4 -3.62096 | TTTCAGCACCGTAAA TCAGCTCCATTA AGG TGATGGAGCTGA TACACATTCGGGATG SPA2902 3013369 - 3013142 - | hypothetical protein SPA2903 3013578 - 3013829 + | endonuclease fragment TERM 3908 3014745 - 3014718 - g 77 -4.1 -5.12617 | GAACCACCTAAAAAA CGGGGATTATA TCGGTG TCTACTCCCCG CTTGACGGGCTGGAC SPA2904 3014110 - 3014910 + | hypothetical protein SPA2906 3015947 - 3015195 - | lipoprotein TERM 3909 3015628 - 3015640 + g 79 -3.3 -5.20606 | opp_overlap 3015624, overlap 3015634 ACCGAAGATGACGGT CTGAC CGC GGCAG TTTTTGTTGCTGTTT TERM 3910 3016173 - 3016196 + H 84 -8.1 -4.67038 | opp_overlap 3016173 GATCGTCTGAGTATA TGGCCTGGC CATGCT GCCGGGTCA TTTTAATTTTCAGGA TERM 3911 3016397 - 3016386 - g 71 -5.8 -4.24342 | TCGCTGAGCAAGAAA GCCT GGCC AGGC GTGTGGACGAATTCG idi 3016218 - 3016763 + | isopentenyl-diphosphate delta-isomerase TERM 3912 3016792 - 3016838 + T 74 -8.2 -3.90744 | gap 3, opp_overlap 3016795 3016797 3016799, overlap 3016798 3016799 GCGCTACGTCAGAAC GAAG-AGA-TGCCGGATGGCGGC TGAT GCC-CCATCCGGCAATTTACATC TTATTTCACCGGACG TERM 3913 3016831 - 3016797 - T 74 -10.7 -3.29593 | gap 1, opp_overlap 3016792 3016798 3016799, overlap 3016795 3016799 ACGTCAGAACGAAGA GATGCCGGATGGCGGC TGAT GCC-CCATCCGGCAAT TTACATCTTATTTCA TERM 3914 3016798 - 3016830 + T 100 -14.2 -3.82865 | gap 1, opp_overlap 3016797 3016795 3016799, overlap 3016792 3016799 CGTCAGAACGAAGAG ATGCCGGATGGCGGC TGAT GCC-CCATCCGGCAA TTTACATCTTATTTC TERM 3915 3016829 - 3016799 - T 100 -17.7 -3.21064 | gap 1, opp_overlap 3016799 3016798 3016792, overlap 3016797 3016795 GTCAGAACGAAGAGA TGCCGGATGGCGGC TGAT GCC-CCATCCGGCA ATTTACATCTTATTT TERM 3916 3016799 - 3016829 + T 100 -17.7 -2.88634 | gap 1, opp_overlap 3016797 3016795 3016799, overlap 3016798 3016792 GTCAGAACGAAGAGA TGCCGGATGGCGGC TGAT GCC-CCATCCGGCA ATTTACATCTTATTT lysS 3018356 - 3016839 - | lysyl-tRNA synthetase prfB 3019464 - 3018366 - | peptide chain release factor 2 TERM 3917 3018425 - 3018459 + g 80 -12.3 -3.44848 | gap 1, overlap 3018422 3018424 TACCGTCCAGTACCG CCTGTGTATTGCGGGT TTCC ACCC-CAGTACGCAGG TCTTTAATGCGGGAA TERM 3918 3019275 - 3019289 + g 70 -7.1 -4.07885 | overlap 3019256 ATCGACGATCGCTTC GAGCG ATGAA CGCTC TTTTCCCAGCGCCTG TERM 3919 3019457 - 3019471 + g 74 -2.8 -4.96996 | TTCACCGGGTTAATT TCAAAC ATG GTCTGA TTTCTTTTATTTGAC TERM 3920 3019532 - 3019507 - R 70 -9.1 -3.30903 | opp_overlap 3019507 3019506 AAAATGCGGTTATAA GGGCGAAAT ATTAGCGG ATTTCGCCC CTTAATTACAGCGAA recJ 3021302 - 3019569 - | ssDNA exonuclease RecJ dsbC 3022021 - 3021308 - | thiol:disulfide interchange protein DsbC TERM 3921 3021504 - 3021517 + g 77 -3.8 -5.0707 | overlap 3021511 CCCTTACCTGCCATG GCGT CATCAA ACGC TTTGTTTTTGTCTTT TERM 3922 3021511 - 3021521 + g 81 -4 -5.19879 | overlap 3021504 CTGCCATGGCGTCAT CAAA CGC TTTG TTTTTGTCTTTGGCG xerD 3022941 - 3022045 - | site-specific tyrosine recombinase XerD fldB 3023054 - 3023575 + | flavodoxin FldB TERM 3923 3023599 - 3023631 + T 80 -12.8 -3.0752 | gap 1, opp_overlap 3023609, overlap 3023609 TCGCTGTATTTCCCT CTCGACGGAACCGCG TTTA CGCCGTTCCGTC-AG TGTTGGCCTGATATC ygfX 3023987 - 3023628 - | hypothetical protein ygfY 3024288 - 3024022 - | hypothetical protein ygfZ 3024538 - 3025518 + | putative global regulator TERM 3924 3025574 - 3025532 - T 83 -9.9 -4.16279 | gap 2, opp_overlap 3025532 3025530 3025534 GATATCACGTTAAAA GC-CG-GATAGCCTGATAGCG CAA CGCCATCAGGCTCGCACGTGC TGTTCTCGTAGGCCG yqfA 3026293 - 3025634 - | hypothetical protein TERM 3925 3026121 - 3026104 - G 80 -4.8 -5.10461 | TTGAGGCAAGAAAAA GCAGGA TCATGC TCCCGC CATATAAACTGTAGC yqfB 3026769 - 3026458 - | hypothetical protein bglA 3026928 - 3028361 + | 6-phospho-beta-glucosidase TERM 3926 3028369 - 3028396 + T 75 -9.8 -3.55548 | overlap 3028370 3028387 AGCTTTAACTCCTGC ACGTTACCCGCC AGTC GGCGGGTAACAC TTTGAACGAGTCTTA TERM 3927 3028370 - 3028395 + T 81 -13.3 -2.73007 | overlap 3028369 3028387 GCTTTAACTCCTGCA CGTTACCCGCC AGTC GGCGGGTAACA CTTTGAACGAGTCTT SPA2920 3029302 - 3028409 - | hypothetical protein TERM 3928 3028590 - 3028603 + g 78 -2.3 -5.26875 | TGGTTATTAATTACG CTGCC ATTA GACAG TTTTTTCGTTCCAGA TERM 3929 3028980 - 3028996 + g 70 -5.1 -4.5032 | overlap 3028981 CCCTCTATGTGCTCA GGAGACA GAT TGTCTCG TTTGTTATTGATATA TERM 3930 3029539 - 3029523 - R 71 -3.7 -4.76892 | overlap 3029534 ACAGCAAGGTAAAAA TGATGCA CAA TGAATCA TTAGACTCTAAAAAA TERM 3931 3029732 - 3029719 - R 87 -9.5 -4.24123 | opp_overlap 3029719 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAGACAGTCG TERM 3932 3029719 - 3029732 + r 75 -9.5 -3.53444 | opp_overlap 3029719 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAGACAGTCG gcvP 3032631 - 3029758 - | glycine dehydrogenase gcvH 3033183 - 3032794 - | glycine cleavage system protein H gcvT 3034303 - 3033209 - | glycine cleavage system aminomethyltransferase T TERM 3933 3034270 - 3034245 - G 71 -6.1 -4.28548 | gap 1, opp_overlap 3034246 3034258, overlap 3034246 3034249 ATCCAGCCATGAAAA TCGACCATGCGG GCG CCGCATAG-CGT GTGTTGTTCGTACAA visC 3035960 - 3034758 - | hypothetical protein TERM 3934 3035486 - 3035510 + g 77 -8.6 -4.13767 | gap 1, opp_overlap 3035488, overlap 3035504 CCGCGGCAATCACCA GAC-GCGCGGT TAAC ATCGCGCCGTC TTTTAAAGTCAGGAA TERM 3935 3035996 - 3036025 + r 72 -5 -4.56597 | gap 2, opp_overlap 3036006 3036007, overlap 3035997 3036006 3036007 AACAATCAAACCGTA GGCCGGATAAGGCG AAGC CGCC--ATCCGGCA TTTTTACGAACACGA visB 3037263 - 3036085 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 3038576 - 3037260 - | proline aminopeptidase P II TERM 3936 3038525 - 3038505 - G 75 -12.5 -2.60496 | opp_overlap 3038504 3038504 3038507, overlap 3038504 3038502 3038507 TGGCGCGGCAAAGAT CAGCGCGGC GCT GCCGGGCTG CATTTGCGCCAGTAA TERM 3937 3038576 - 3038594 + r 85 -3.8 -5.5353 | overlap 3038577 ATTCCTGCTGAGTCA TGACATGG CCT CCATTTCG TTTTTTCTTAGTGTA ygfB 3039180 - 3038602 - | hypothetical protein TERM 3938 3038860 - 3038848 - G 77 -4.8 -4.87291 | GAGGCCAAGCAAAAA GTGG TTAAC CCAC CCGGCTAATGCATCT TERM 3939 3038944 - 3038928 - G 70 -2.9 -4.72486 | opp_overlap 3038932, overlap 3038932 3038934 GATAAAGCTGAAAAA GAAAGCC GTC GTCTTCC AGCGCGTCGCTGGTC TERM 3940 3038968 - 3038932 - G 80 -5 -4.88293 | opp_overlap 3038932 3038947, overlap 3038928 3038934 AAGCTGAAAAAGAAA GC-CGTCGTCTTCCAGCG CGT CGCTGGTCGCCG-CGTGC ATTTTGCGCAGCGCC TERM 3941 3039565 - 3039554 - g 72 -3.6 -4.77157 | overlap 3039561 3039562 TTAACTCAGGAAAAA GCGA AGAC CCGC GATTACGCGGCGAGC ygfE 3039347 - 3039676 + | Z-ring-associated protein ygfA 3039970 - 3040518 + | putative ligase TERM 3942 3040689 - 3040708 + T 86 -11.4 -3.71649 | overlap 3040704 CCTTTCCTTTTTAGA GCCCCTGC CTCG GTAGGGGC TTTCCCGTTTCAGCG TERM 3943 3040866 - 3040887 + T 86 -11.6 -3.54459 | opp_overlap 3040866 3040864 3040863 AAACCAGAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGAGGAAATTAG TERM 3944 3040887 - 3040866 - T 78 -11.6 -3.0955 | opp_overlap 3040866, overlap 3040864 3040863 AAACCAGAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGAGGAAATTAG serA 3042131 - 3040899 - | D-3-phosphoglycerate dehydrogenase TERM 3945 3041786 - 3041806 + g 72 -11.1 -3.03124 | opp_overlap 3041772 3041786 ACAGCTCGCCAATCA CCAGTTCCG CCA CGGAACGGG TATTCGAGAATGGCG rpiA 3043057 - 3042398 - | ribose-5-phosphate isomerase A TERM 3946 3043622 - 3043596 - g 74 -8.1 -3.92592 | gap 2 AGGTGGAAGATGAAA CGCGCACGCAAGA ACG TCT-GCGT-CGCG GCGAGGTGGTGGGCG iciA 3043211 - 3044104 + | chromosome replication initiation inhibitor protein TERM 3947 3044364 - 3044339 - T 75 -6.7 -4.39828 | overlap 3044340 3044341 AACACCGGGAGAAAA TGCGGCCTGGA AGCG CCCAGGCCGGG CGAGATTACTGCGTG TERM 3948 3044363 - 3044340 - T 74 -10.2 -3.23174 | overlap 3044339 3044341 ACACCGGGAGAAAAT GCGGCCTGGA AGCG CCCAGGCCGG GCGAGATTACTGCGT TERM 3949 3044362 - 3044341 - T 83 -13.7 -2.53422 | overlap 3044340 3044339 CACCGGGAGAAAATG CGGCCTGGA AGCG CCCAGGCCG GGCGAGATTACTGCG yggE 3045116 - 3044370 - | hypothetical protein yggA 3045845 - 3045210 - | arginine exporter protein yggB 3046906 - 3046046 - | mechanosensitive channel MscS TERM 3950 3046168 - 3046179 + g 71 -5.8 -4.25104 | CCCAGTAGACATTTT GCAG GTCG CTGC TTTTACTCCAGACAC TERM 3951 3047090 - 3047109 + r 88 -12.2 -3.64703 | opp_overlap 3047090 ATAACGATAAAAAAA TGGCTTCC CGAG GGAAGCCA TTTCAATCAGCAGAC TERM 3952 3047109 - 3047090 - R 100 -12.2 -5.73339 | opp_overlap 3047090 ATAACGATAAAAAAA TGGCTTCC CGAG GGAAGCCA TTTCAATCAGCAGAC fba 3048208 - 3047129 - | fructose-bisphosphate aldolase TERM 3953 3048259 - 3048246 - R 72 -3.1 -5.00616 | gap 1, overlap 3048249 GGCTTTGGGAAAAAA CACGGG CCG CCC-TG AATGTCAGATCGGCG TERM 3954 3048306 - 3048280 - R 80 -9.5 -3.87373 | gap 1, opp_overlap 3048280 3048303, overlap 3048284 CAGATCGGCGATAAA TCAACGGGCAGG AATC CCTGCCCGT-AA CGATTACTTCTTAGC TERM 3955 3048303 - 3048284 - R 100 -15 -3.6053 | opp_overlap 3048280, overlap 3048280 TCGGCGATAAATCAA CGGGCAGG AATC CCTGCCCG TAACGATTACTTCTT pgk 3049473 - 3048310 - | phosphoglycerate kinase TERM 3956 3049069 - 3049089 + g 76 -3.2 -5.00616 | opp_overlap 3049069 GGCGTCCATCACGAA TACGTCAC ACAGG GCGGCGTA TTTTTTAGACAGCGC TERM 3957 3049097 - 3049113 + g 74 -4.3 -4.69559 | GCGGCGTATTTTTTA GACAGCG CTT CGTCGTC TTTCTTTTCGCCTTT TERM 3958 3049438 - 3049428 - G 72 -2.4 -4.87665 | opp_overlap 3049436 CCGCACGGATAAAAA CGCG TTT CCCG GCCAGATCCAGATCG epd 3050541 - 3049495 - | erythrose 4-phosphate dehydrogenase TERM 3959 3050152 - 3050139 - G 71 -4.5 -4.62069 | overlap 3050140 GGTTCACGCCAAAAA CGACG GTGG CGTCA AGATCGTTGCTGCCC SPA2942 3050915 - 3051340 + | hypothetical protein TERM 3960 3051577 - 3051609 + G 80 -12 -3.40299 | GGCTGCTTACCGACC CTATCGCTGCCGCG TTTGC CCCGGTAGCGATGG TTATCGGTCTGGTCG SPA2943 3051366 - 3051944 + | hypothetical protein SPA2944 3051978 - 3052652 + | hypothetical protein TERM 3961 3052683 - 3052698 + G 71 -4.6 -4.55798 | TTCCGTCCGATGCGA CACGCC CGCC GGCATG TTTTGATTTCCACTA SPA2945 3052634 - 3053317 + | ABC transporter ATP-binding protein TERM 3962 3053860 - 3053911 + G 83 -15.4 -2.53903 | gap 3, opp_overlap 3053873, overlap 3053870 3053870 3053873 3053892 CTGGCGACATGCCGG GCACGGG-GAAC-CAGCGTCGTGGC GATTA GCCATGACGCTGCGTTTACCCG-GC GTCATTTTTCACGGG TERM 3963 3053870 - 3053900 + G 79 -13.3 -2.72144 | opp_overlap 3053873, overlap 3053860 3053870 3053873 3053892 GCCGGGCACGGGGAA CCAGCGTCGTGGC GATTA GCCATGACGCTGC GTTTACCCGGCGTCA TERM 3964 3053870 - 3053901 + G 85 -13.1 -3.5393 | gap 1, opp_overlap 3053873, overlap 3053870 3053860 3053873 3053892 GCCGGGCACGGGGAA C-CAGCGTCGTGGC GATTA GCCATGACGCTGCG TTTACCCGGCGTCAT TERM 3965 3053873 - 3053897 + G 78 -13.6 -2.64155 | opp_overlap 3053873, overlap 3053870 3053870 3053860 3053892 GGGCACGGGGAACCA GCGTCGTGGC GATTA GCCATGACGC TGCGTTTACCCGGCG TERM 3966 3053892 - 3053915 + G 89 -8.8 -4.58663 | opp_overlap 3053873, overlap 3053873 3053870 3053870 3053860 CGTGGCGATTAGCCA TGACGCTGCG TTTA CCCGGCGTCA TTTTTCACGGGTGGT SPA2946 3053311 - 3053967 + | ABC transporter ATP-binding protein TERM 3967 3053972 - 3053991 + T 100 -15 -4.42619 | opp_overlap 3053972 AGGGGGAATAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCGTATTA TERM 3968 3053991 - 3053972 - T 100 -15 -5.45652 | opp_overlap 3053972 AGGGGGAATAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCGTATTA tktA 3056002 - 3054011 - | transketolase TERM 3969 3055182 - 3055240 + g 83 -9.5 -4.15044 | gap 2, overlap 3055179 3055183 CAGCCCAACTGTTCG C-GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCCTG TTTGTTCGGCGAACC TERM 3970 3055183 - 3055238 + g 89 -13.2 -3.6761 | gap 1, overlap 3055179 3055182 AGCCCAACTGTTCGC GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCC TGTTTGTTCGGCGAA TERM 3971 3056473 - 3056462 - g 73 -5.8 -4.38313 | overlap 3056455 3056463 ACAGCAAAGCGAAAA TCGC GCCG GCGA GCAGCGAATACACTA TERM 3972 3056512 - 3056491 - g 71 -7.3 -3.93664 | gap 1 AGCGAATACACTAAA CGACTGGCAA AAA TTGCC-GCCG CGCTGGGGGATAACA TERM 3973 3056835 - 3056812 - g 71 -4.6 -4.57073 | gap 1, overlap 3056814 GATCTTGGCGAAAAA CT-GGTGAACT CGC AGTTCTCCCAG CGTCAGGAGTCCGAA yggG 3056278 - 3057036 + | hypothetical protein speB 3058057 - 3057137 - | agmatinase TERM 3974 3057712 - 3057724 + g 71 -4.8 -4.59773 | AGAGCATACGCTTGC CTGC AGACA GCAG TTTTTCAGCGTGCGC TERM 3975 3058104 - 3058138 + r 82 -11.4 -3.61988 | opp_overlap 3058104, overlap 3058100 AACAGATGAAAAAAA TCCCCTCCGCGTCG TTAAACC CGACGAGGAAGGGA TTGATTTGTAAATCG TERM 3976 3058138 - 3058104 - R 100 -13.6 -5.62219 | opp_overlap 3058104 3058100 AACAGATGAAAAAAA TCCCCTCCGCGTCG TTAAACC CGACGAGGAAGGGA TTGATTTGTAAATCG TERM 3977 3058160 - 3058175 + r 77 -10.4 -3.40073 | opp_overlap 3058151, overlap 3058151 TGTAAATCGCTATTG CGGCGA ATTA TCGCCG TTAATTCATACGGGT speA 3060261 - 3058285 - | arginine decarboxylase TERM 3978 3058591 - 3058579 - G 80 -9.1 -4.11183 | opp_overlap 3058577, overlap 3058576 GCCGACCATAAAGAA GCCGA GCA TCGGC GGATTCTCTGGATCG TERM 3979 3059402 - 3059387 - G 77 -8.2 -4.21142 | overlap 3059388 AGCTCAACATAGAAA CGCGCG GACT CGCGCA CGCCGGTCGCGATAT yqgB 3060401 - 3060270 - | hypothetical protein TERM 3980 3060477 - 3060460 - H 75 -6.3 -4.52703 | opp_overlap 3060472, overlap 3060450 GAAACCACGAGAAAA CTCTTGC GTTA ACAAGAG CGCCCTTGTTCAGTC TERM 3981 3060714 - 3060738 + G 70 -5 -4.52589 | gap 1, overlap 3060718 ACCCGGCTGGAAGTG GCGACACGAAG AAAA CGTCGTGT-GC TTTTGTATGAGCCGC TERM 3982 3060751 - 3060761 + G 81 -8.2 -4.36914 | TGCTTTTGTATGAGC CGCG CGT CGCG TTTTATACCCAGAAC yqgD 3060711 - 3060902 + | hypothetical protein TERM 3983 3061527 - 3061515 - g 83 -7.7 -4.59853 | opp_overlap 3061515, overlap 3061517 TGAAGTGCGTAAAAA TGGCA CCC TGCCA TGGTTGCGTCCAGAT TERM 3984 3062184 - 3062170 - g 74 -7.8 -4.11869 | GAAAAAACCGACAAA GCGCAA CTG CTGCGC GATGCTGCCGGTCTG metK 3061051 - 3062205 + | S-adenosylmethionine synthetase TERM 3985 3062253 - 3062285 + F 90 -14.3 -3.21099 | opp_overlap 3062260, overlap 3062256 3062260 TAAACCATACCGTAC TTATAAAGGCCAGCG CCC TGCTGGCCTTTATCA TTGCTGATACACGCA TERM 3986 3062256 - 3062282 + F 93 -16 -2.80016 | opp_overlap 3062260, overlap 3062253 3062260 ACCATACCGTACTTA TAAAGGCCAGCG CCC TGCTGGCCTTTA TCATTGCTGATACAC TERM 3987 3062260 - 3062278 + F 95 -12.4 -4.08546 | opp_overlap 3062260, overlap 3062256 3062253 TACCGTACTTATAAA GGCCAGCG CCC TGCTGGCC TTTATCATTGCTGAT TERM 3988 3062278 - 3062260 - f 95 -11.7 -3.92373 | opp_overlap 3062256 3062253 3062260 TACCGTACTTATAAA GGCCAGC GCCCT GCTGGCC TTTATCATTGCTGAT TERM 3989 3062961 - 3062948 - g 84 -3.1 -5.40072 | gap 1 TGGGTCGTAAAAAAA GCCTGA TGA TC-GGC GCTATCCTGTTCGTC TERM 3990 3063293 - 3063305 + G 76 -10.5 -3.69323 | GCCCGCGCTGGTTTG CGGCG AAA CGCCG TTTCCATGATGCTGA galP 3062698 - 3064092 + | galactose-proton symport (galactose transporter) TERM 3991 3064101 - 3064127 + F 100 -21 -5.08601 | CGACTAATCCCTCCA CGCTTCCTCCTG CCA CAGGAGGAAGCG TTTTTCTTGCAGTCC sprT 3064171 - 3064668 + | hypothetical protein TERM 3992 3064668 - 3064688 + F 79 -9.7 -3.72695 | opp_overlap 3064678 ACTGGTCGCCGGGTA GTTCCCGAA ACG TCCGGGAAC TTTCCTGAGCGGACT endA 3064763 - 3065470 + | endonuclease I TERM 3993 3065963 - 3065927 - g 77 -3.6 -5.06816 | gap 1, overlap 3065928 3065929 ACGTCTGAACAAAAA GC-GCCAGCAGTGGCAA AAGA TCGCCATCGCCGCCTGC GAACAATGCGGGCGT yggJ 3065547 - 3066278 + | hypothetical protein TERM 3994 3066791 - 3066805 + G 74 -7.8 -4.14392 | AACCGCTGGACGGTA TGGGCG GCG CGTCCA TTTTCCGCGTTAAGG gshB 3066298 - 3067245 + | glutathione synthetase yqgE 3067461 - 3068024 + | hypothetical protein TERM 3995 3068076 - 3068064 - g 70 -3.3 -4.83169 | ACTTCGGCACAAAAA GCATC GGC GTTGC AATAGGACAACGCAT TERM 3996 3068212 - 3068174 - g 71 -9.5 -3.53761 | GAACGTTTGCTGAAA GAGTGGCAGCCGGACGA AATTA TTGTCGGGCTACCGCTC AACATGGATGGCACT yqgF 3068024 - 3068440 + | Holliday junction resolvase-like protein SPA2961 3069173 - 3068487 - | global regulatory protein pilT 3070285 - 3069305 - | Type II secretion, ATP-binding, protein TERM 3997 3069737 - 3069719 - G 72 -11.6 -3.06183 | GGGATCTTCACGCAA CGCCGCGC GCA GCCCGGCG GCAAAAGTGGCGCAA TERM 3998 3070068 - 3070044 - G 78 -13.5 -2.52896 | overlap 3070003 TGATGTTTGAACGCA CTGGCGCGCAG GCG CCGCGTGCCAG ACAGCGAGACGGCGA TERM 3999 3070360 - 3070346 - g 70 -5.6 -4.38154 | opp_overlap 3070348, overlap 3070348 ACATCCGGGACAAAA TCTCCG CCG CGGCGA CGCGTTGCGGCCGCT TERM 4000 3070436 - 3070417 - g 71 -5.7 -4.23781 | overlap 3070418 GTGAGTAAAACCAAA CCTGCGA GCGACA TCGCAGA AGCCATTGCCGCCGG TERM 4001 3070529 - 3070499 - g 74 -2.5 -5.00884 | opp_overlap 3070486, overlap 3070486 3070500 AGGGGGTGGAAAAAA TCCGCCACTTTCA GGAAG CGAAAGTGGAAGG CCTGCACTGGCACTT yggS 3070303 - 3071007 + | hypothetical protein yggT 3071026 - 3071592 + | hypothetical protein yggU 3071589 - 3071879 + | hypothetical protein TERM 4002 3071941 - 3071954 + G 70 -6.7 -4.21098 | opp_overlap 3071926, overlap 3071926 GTGCGCGAGCTCGCG TCGCT GTTA AGCGA TTTTGGGCTTGATGT TERM 4003 3072447 - 3072419 - g 91 -3.7 -5.4505 | opp_overlap 3072446, overlap 3072421 3072443 CCCGTGAAGAAAAAA GCGCGATTTCCCA CCG TGGACAAGCGCTC AAGCTGCTGCTGGAT yggV 3071887 - 3072480 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 4004 3073547 - 3073570 + G 73 -5.3 -4.6644 | opp_overlap 3073532 3073554 TGCGAGCAATACTGG CAGATTACC CGGCAC GGTAAACTG TTTTTAAACTCTCTT yggW 3072473 - 3073609 + | coproporphyrinogen III oxidase TERM 4005 3073664 - 3073613 - T 95 -12.5 -3.9461 | gap 3, opp_overlap 3073663, overlap 3073614 3073616 CTCGCGGAATAACAA GGATAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTA-CC GACCTGTGGCGGTTA TERM 4006 3073664 - 3073614 - T 88 -14.9 -2.96444 | gap 2, opp_overlap 3073663, overlap 3073613 3073616 TCGCGGAATAACAAG GATAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTACC GACCTGTGGCGGTTA TERM 4007 3073662 - 3073616 - T 85 -13.9 -3.03309 | gap 2, overlap 3073613 3073614 GCGGAATAACAAGGA TAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTA CCGACCTGTGGCGGT yggM 3074707 - 3073700 - | hypothetical protein TERM 4008 3074158 - 3074169 + g 74 -4.4 -4.77165 | CGTCCGCTTCTTTTT TAGC TACC GCTA TTTTCTTATCCAGGG TERM 4009 3074573 - 3074608 + g 70 -7 -4.2142 | gap 1, opp_overlap 3074575 TAAGGTAATGGAATC CAGTTTAAGTATGCCGT GGT ACTGCTTAC-TAAACTG TTCTTTTAAGATGTT TERM 4010 3074833 - 3074809 - R 73 -10 -3.34715 | gap 1, opp_overlap 3074810 3074811, overlap 3074807 3074811 GAGGTCTTCCAAAGA TAGCCCCGGCC TTCC GACCGGGGC-A TTATCTTTAATACTG TERM 4011 3074810 - 3074833 + r 77 -9.4 -3.87323 | opp_overlap 3074809 3074807 3074811, overlap 3074811 AGGTCTTCCAAAGAT AGCCCCGGCC TTCC GACCGGGGCA TTATCTTTAATACTG TERM 4012 3074811 - 3074832 + r 82 -12.9 -2.91671 | opp_overlap 3074809 3074807 3074811, overlap 3074810 GGTCTTCCAAAGATA GCCCCGGCC TTCC GACCGGGGC ATTATCTTTAATACT TERM 4013 3074832 - 3074811 - R 100 -15.1 -3.24232 | opp_overlap 3074811 3074810, overlap 3074809 3074807 GGTCTTCCAAAGATA GCCCCGGCC TTCC GACCGGGGC ATTATCTTTAATACT ansB 3075886 - 3074840 - | L-asparaginase II TERM 4014 3075192 - 3075172 - G 71 -7.5 -3.95073 | TCGCATAGTTATAAA CGATACCGA CTT TCGGCAACG CGGTCAGCTTCGACA TERM 4015 3076035 - 3076055 + r 70 -9.7 -2.94232 | opp_overlap 3076035, overlap 3076034 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTACGCC ATTGTTTAAAAAGGA TERM 4016 3076055 - 3076035 - R 100 -11.9 -5.35365 | opp_overlap 3076035 3076034 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTACGCC ATTGTTTAAAAAGGA yggN 3076791 - 3076075 - | hypothetical protein TERM 4017 3076816 - 3076835 + r 73 -10.6 -3.03203 | opp_overlap 3076815 3076814 CCCTCAAGACAAAGC GGGCCGGC ATTT GCCGACCC TGTACTTATTAGTCC yggL 3077170 - 3076844 - | hypothetical protein TERM 4018 3076992 - 3077008 + g 70 -6.5 -4.18488 | CAGGCTAGGTAGCCG CTGCCGT CAA ACGCCAG TTTATTAGGCTCAAT trmB 3077889 - 3077170 - | tRNA (guanine-N(7))-methyltransferase TERM 4019 3077519 - 3077548 + g 74 -7.9 -4.08394 | gap 1, overlap 3077520 ATTTTATGCAACACT TCTACTGCGTCATG GCA CATGACGC-GCAGG TTTTCAACGCCCTCT TERM 4020 3078558 - 3078579 + G 74 -6.5 -4.25283 | gap 1, opp_overlap 3078558 TGAGCGAGCAAGTGA CGCCCGCACG CGG CGTG-GAGCG TTTTAATCAGGCGAT mutY 3078044 - 3079096 + | adenine DNA glycosylase TERM 4021 3079307 - 3079285 - g 77 -4.1 -4.99861 | GATTAACGAGAAAAA GCTCAACAT GATGA ACGCCGAGC ACCGTAAGCTGCTGG yggX 3079124 - 3079399 + | hypothetical protein TERM 4022 3080016 - 3079999 - g 80 -9.1 -4.08945 | opp_overlap 3080013, overlap 3080000 3080011 ATTACTTGCTGAAAA CGCGGCT CAAA AGCCGCA GTAACGGCCTGCGTA mltC 3079512 - 3080597 + | murein transglycosylase C nupG 3080814 - 3082070 + | nucleoside permease TERM 4023 3082080 - 3082131 + T 100 -18.3 -3.51708 | gap 2, overlap 3082081 CATTAATCCTTGCCC TGTT-TC-GCAGGCCGGATAAGGCG TAAA TGCCTTATCCGGCCTGCAGGCAACG TTACTTTAAAACATA TERM 4024 3082081 - 3082130 + T 100 -19.6 -2.70704 | gap 2, overlap 3082080 ATTAATCCTTGCCCT GTT-TC-GCAGGCCGGATAAGGCG TAAA TGCCTTATCCGGCCTGCAGGCAAC GTTACTTTAAAACAT speC 3084267 - 3082132 - | ornithine decarboxylase TERM 4025 3082441 - 3082452 + g 75 -5.8 -4.60889 | CGGCAGGCTTTCTTT GCGA AACA TCGC TTTTTGCAGATCCTT TERM 4026 3083172 - 3083159 - G 73 -5.2 -4.56597 | TTGTGCGGGCAAAAA CGCG CCTGGC CGCG AATATGGTTATCTTT TERM 4027 3084373 - 3084403 + H 73 -9.9 -3.41602 | opp_overlap 3084372 3084375 3084382 CCGACCGCCAGACAT CAGTAAAAACAGA CTGTT TCTGATTTTACTG TTGTCCTGCAGTGAG TERM 4028 3084394 - 3084382 - H 71 -3.4 -4.79826 | opp_overlap 3084373, overlap 3084375 3084372 AGACATCAGTAAAAA CAGA CTGTT TCTG ATTTTACTGTTGTCC TERM 4029 3084889 - 3084904 + G 72 -2.4 -4.93877 | overlap 3084875 3084891 GGCGACGCTGGTCGG CGCGCT TATC GGCGAG TTTTGTTTGCTGGAA TERM 4030 3085155 - 3085169 + G 77 -11.4 -3.53563 | overlap 3085150 CCTGTTCGCTTGGCA TCGCCG TTT CGGCGA TTTGCGCACCGATGT TERM 4031 3085372 - 3085387 + G 74 -2.4 -5.09895 | overlap 3085371 3085372 GGCGATGCCGATCTC CGCCGC ATGG GCGATG TTTTTTGCCTGACTC yqgA 3084692 - 3085399 + | hypothetical protein TERM 4032 3085547 - 3085531 - f 73 -10.9 -2.62616 | opp_overlap 3085530 3085529 3085526 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 4033 3085772 - 3085762 - f 71 -6.8 -4.11304 | TTAACCGACAAACAA GCAC GTA GTGC AAAGCCTTCTGATAA TERM 4034 3086417 - 3086405 - f 72 -10.5 -2.89659 | overlap 3086404 GACACCTACAACAAG GCCGG ATA CCGGC TATCAACACTTTCCG TERM 4035 3086587 - 3086615 + F 100 -13.2 -4.82901 | opp_overlap 3086587 3086584 ATAAGAGTAAATCCA CAGCATTCCGCC TTAAT GGTGGGATGCTG TTTTTGTCCGGGAAC SPA2980 3086803 - 3086922 + | hypothetical protein TERM 4036 3086960 - 3086940 - f 78 -4.7 -4.946 | overlap 3086945 ATGAAAGACTAAAAA CACCAGATG ATG CATCCAATG ATAGCATTAAATCAG SPA2981 3087131 - 3087319 + | hypothetical protein SPA2982 3087309 - 3087605 + | hypothetical protein TERM 4037 3088223 - 3088236 + G 70 -6.7 -4.08216 | opp_overlap 3088211 GAATGGAGAGAATCT CAAGG ATTG CCTTG TTTTAAGAAAAGTAA SPA2983 3087989 - 3088255 + | bacteriocin immunity protein TERM 4038 3088526 - 3088512 - g 86 -3.6 -5.29385 | AATGGAACTAAAAAA TAACCT TGA AGATTA TACAGAAGATGAGTT SPA2984 3088498 - 3088776 + | bacteriocin immunity protein SPA2985 3089179 - 3089682 + | hypothetical protein SPA2986 3089941 - 3090126 + | hypothetical protein SPA2987 3090323 - 3090853 + | hypothetical protein SPA2988 3090855 - 3091481 + | hypothetical protein SPA2989 3091787 - 3091617 - | hypothetical protein TERM 4039 3091700 - 3091714 + g 74 -2.9 -4.85599 | TTTTTCTGTTCCACT TGATA ATATG TATCA TTTTTATCAGGTCAG TERM 4040 3091997 - 3091974 - g 86 -3.8 -5.42862 | opp_overlap 3091977, overlap 3091977 ATATGCTCAAAAAAA TCATTGGCGC TCTC GCGTCAATTA TTGGCGGGCTACTTG TERM 4041 3092001 - 3092013 + G 89 -3.3 -5.4492 | TCGCGTCAATTATTG GCGGG CTA CTTGC TTTTTTATGTGTCTA SPA2990 3091931 - 3092137 + | hypothetical protein SPA2991 3092389 - 3092162 - | hypothetical protein TERM 4042 3092401 - 3092420 + H 100 -15 -5.38054 | CCAACCATTCAGATG CGGACGCC CTAT GGCGTCCG TTTTTATTTATAAAA TERM 4043 3092659 - 3092644 - H 76 -9 -3.68435 | overlap 3092642 CGTCTCAAAAGAATA TCGTCC TGAA GGACGA GAACTCACGGCATTT TERM 4044 3092716 - 3092728 + H 77 -3.5 -5.24129 | opp_overlap 3092716 AAAAAATCATATTAA TAATT TTA AATTA TTTTTTATAAAACCA TERM 4045 3092993 - 3093005 + G 84 -3.3 -5.36965 | GCGCAACTCATTCCT CTGTC GTC GGCGG TTTTTTATCGTGTTA SPA2992 3092915 - 3093598 + | LysR family transcriptional regulator SPA2993 3094227 - 3093703 - | hypothetical protein SPA2994 3095737 - 3094238 - | amino acid ABC transporter SPA2995 3096212 - 3095946 - | hypothetical protein ordL 3097636 - 3096335 - | putative oxidoreductase TERM 4046 3097734 - 3097700 - H 70 -5.1 -4.386 | opp_overlap 3097700, overlap 3097718 TAACGTTTTACAAAA TATCGTCCGGAAGAA TGACG TTCTTTGGAACGATA TTCAGTTCCAGGCAA TERM 4047 3097809 - 3097832 + G 74 -2.4 -5.00616 | overlap 3097811 TCTGATGAGCGATGT GACATTACTT GCCG AAGTAACGAC TTTTTTACGCCAACG TERM 4048 3098875 - 3098851 - g 75 -5.8 -4.59773 | gap 2 GTTCAGCTTGAAAAA GTGCTGCGTCTG ATT CA-ACGC-GCAC GGGAAGAAGGGGATA SPA2997 3097798 - 3099282 + | aldehyde dehydrogenase SPA2998 3099801 - 3099418 - | putative cytoplasmic protein SPA2999 3100283 - 3099798 - | hypothetical protein TERM 4049 3100834 - 3100823 - R 79 -3 -5.27779 | GTGAACACTAAAAAA TGAT TTAA ATCA AAAAACAAACCATTC SPA3000 3101931 - 3101008 - | hypothetical protein SPA3001 3102689 - 3101970 - | hydrolase TERM 4050 3102411 - 3102430 + g 73 -6.4 -4.43189 | opp_overlap 3102411 ACCCACCTTTGCAAA TGGCAGTT GAAA AACAGCCA TTTTATCGCCTTCCT TERM 4051 3103103 - 3103081 - R 74 -10.8 -3.27653 | overlap 3103079 ACCCTTACCACAATA TTATTTTCAG CAT CTGAAAATAA TCAGGCAAACTAAAT TERM 4052 3103122 - 3103148 + r 78 -6.5 -4.59773 | opp_overlap 3103124, overlap 3103124 GGCAAACTAAATGAT AACGCGCTGGT ATAAA ACCAACGCGTA TTTTTACCGATAAGG TERM 4053 3103146 - 3103124 - R 86 -11.3 -3.66643 | opp_overlap 3103124 3103122 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4054 3103124 - 3103146 + r 77 -9.1 -3.91506 | opp_overlap 3103124, overlap 3103122 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4055 3103195 - 3103172 - R 85 -12.4 -3.38326 | overlap 3103174 GATAAGGGTAATGAA GACGGCCACC CGAA GGTGGCCGTT AGAACCCGGTAGCGC TERM 4056 3103193 - 3103174 - R 100 -15 -3.25539 | overlap 3103172 TAAGGGTAATGAAGA CGGCCACC CGAA GGTGGCCG TTAGAACCCGGTAGC exuT 3104548 - 3103244 - | hexuronate transporter TERM 4057 3104631 - 3104620 - H 76 -4.4 -5.04325 | CTGAAATCACAAAAA TTGG TTGA CCAA TAAATATTTTCTCAT uxuA 3104953 - 3106137 + | mannonate dehydratase TERM 4058 3106145 - 3106169 + F 100 -16.5 -3.62275 | GCAAATAACCTTCTT TCGCATGGCGC GAC GCGTCATGCGA TTTCCCCTACTCAAT TERM 4059 3106686 - 3106641 - g 87 -8.3 -4.66163 | gap 1, opp_overlap 3106655 3106656 ACCGTGACCGAAAAA GGCTACTG-CACCGACCCCGCC AGC GGCGAGCTTGATGTCAATAACC CGCTGATCCAAAACG uxuB 3106248 - 3107720 + | D-mannonate oxidoreductase TERM 4060 3108676 - 3108688 + G 76 -10.5 -3.68619 | GTTCCGCCTGCTGGG GCCGG ATA CCGGC TTTGACTCCATTGGC uxaC 3107732 - 3109144 + | glucuronate isomerase TERM 4061 3109326 - 3109269 - T 76 -8.8 -3.7798 | gap 2, opp_overlap 3109292, overlap 3109282 GATAAAAAGCAAAGA TGTCGCTGATTAATCCCGAATCACTTAC TAAG GTAAGTGATTCGGG-TAAACAAAC-ACA GCCATCTTCTGCGTC TERM 4062 3109315 - 3109282 - T 100 -16.9 -3.14344 | opp_overlap 3109292, overlap 3109269 GATGTCGCTGATTAA TCCCGAATCACTTAC TAAG GTAAGTGATTCGGGT AAACAAACACAGCCA SPA3006 3110499 - 3109444 - | hypothetical protein TERM 4063 3111156 - 3111120 - R 100 -17.4 -3.81488 | gap 1, overlap 3111122 CGTTGGTAAACACAA CAGGCGGGATATCGGCG CCAA CGCCGATATCCCGAC-G AGAATGACCCCGTTA TERM 4064 3111155 - 3111122 - R 100 -21.1 -3.49232 | overlap 3111120 TTGGTAAACACAACA GGCGGGATATCGGCG CCAA CGCCGATATCCCGAC GAGAATGACCCCGTT gsp 3113025 - 3111169 - | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase TERM 4065 3112310 - 3112323 + g 77 -4.5 -4.83615 | ATAACGTGTCCGTTC GCCTG TACA TAGGC TTTTTGTAACGGATC TERM 4066 3112699 - 3112681 - G 74 -11.6 -3.24747 | TTGCCAGATGAGCAA CGCCCCGG CCT CCGGCGCG CGCGGCGAACCGTTC TERM 4067 3113581 - 3113594 + G 73 -5.2 -4.65895 | opp_overlap 3113555 3113581 CGATAACTCACACAA CCCG CCGATT CGGG TTTTTGAGTCGGGCG yghU 3113252 - 3114118 + | putative glutathione S-transferase YghU SPA3009 3114896 - 3114186 - | hypothetical protein TERM 4068 3114780 - 3114762 - G 78 -2.2 -5.26875 | overlap 3114764 CGCCGAAGCAAAAAA GTCGCACG CTT CGCCCGCC TCGATGCGTTCACGT TERM 4069 3115190 - 3115166 - R 84 -10.7 -3.86897 | GCGATTCTGGACAAA GATCACCTGTG GAT CCCAGGCGATC ACCTGCTCCATTGTC TERM 4070 3115622 - 3115642 + r 78 -6.7 -4.59773 | opp_overlap 3115619 3115621 CGTGACAAACACCAC CTGCGGGCG CAG CGCCACCAG TTTTTCAGGATCAAC TERM 4071 3115933 - 3115913 - R 80 -9.7 -3.96447 | CCAGCAAAAAAGCAA CGCCAGC AGAGAGA GCTGGCG CAAAAATTTATTCAT hybG 3116272 - 3116024 - | hydrogenase 2 accessory protein HypG hypA 3116641 - 3116300 - | hydrogenase nickel incorporation protein HybF hybE 3117122 - 3116634 - | hydrogenase 2-specific chaperone hybD 3117609 - 3117115 - | hydrogenase 2 maturation endopeptidase TERM 4072 3117195 - 3117174 - G 71 -10.2 -3.16564 | opp_overlap 3117177, overlap 3117177 CTCGCAGCGCAGCAA GAACCTGC TCAAGC GCAGGTTC AATCATCGCCTCGAC hybC 3119312 - 3117609 - | hydrogenase 2 large subunit TERM 4073 3118283 - 3118295 + g 74 -10.5 -3.50335 | TAGTGCCTTCCCACG GCGCC TGC GGCGC TTCATCTTTATACCA TERM 4074 3118838 - 3118854 + g 70 -9.5 -3.40382 | opp_overlap 3118841, overlap 3118841 ACTGACCGCTGGCGA CAAGATC CTT GATCTTG TTCTGAACTTTCGTG TERM 4075 3119331 - 3119342 + r 76 -4.4 -5.07652 | overlap 3119320 3119325 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3120487 - 3119309 - | putative hydrogenase 2 b cytochrome subunit TERM 4076 3119455 - 3119435 - G 74 -8.3 -3.95911 | AATAGAAATCAACAA TTCTTCCCA GGT TGGGAAGTA GTGGTAGCCGCCACC TERM 4077 3120459 - 3120469 + g 77 -8.2 -4.21462 | TTACTGATGATTTTT CCGC CCA GCGG TTTTGGATCATGACT hybA 3121463 - 3120477 - | hydrogenase 2 protein HybA TERM 4078 3121053 - 3121070 + g 76 -2.7 -5.00616 | gap 1, overlap 3121057 TTTGTCATAGTGGAC GATGCCGG TTT TCGG-ATC TTTTTTCAGCGCCGA TERM 4079 3121120 - 3121133 + g 74 -6.7 -4.29106 | opp_overlap 3121119 CAGTTAGGATCAACG CAGTG CATA CACTG TTTCTTGATGTAGGC hyb0 3122584 - 3121466 - | hydrogenase 2 small subunit yghW 3123061 - 3122774 - | hypothetical protein TERM 4080 3123071 - 3123104 + r 80 -12.7 -3.05384 | overlap 3123074 ATTCATCTGACCTCC TTAGTCGCTATATAA TAAA TTATATAGCGACTGG TTAAATGAAGGCCAG TERM 4081 3123074 - 3123101 + r 86 -14.4 -2.75064 | overlap 3123071 CATCTGACCTCCTTA GTCGCTATATAA TAAA TTATATAGCGAC TGGTTAAATGAAGGC TERM 4082 3123119 - 3123131 + r 89 -6.2 -5.27477 | GTTAAATGAAGGCCA GCGC ATTAC GCGC TTTTTTGCTTCACAT SPA3020 3124789 - 3123146 - | hypothetical protein TERM 4083 3123302 - 3123253 - G 76 -10.7 -3.62096 | gap 1, opp_overlap 3123232 GCTCACTAGCGGAAA GCCGGAACTGCTGTACGGAGCGTT GCA AATCCTCCGT-CTGCCGTTCCAGC GCCGCTGCCGCCGCG TERM 4084 3124859 - 3124883 + r 79 -2.1 -5.48303 | overlap 3124860 GTTATCGGCAAGGCG CGGAGAATATA TAA TGCATTCTCCA TTTTTTTACAGTTAT yqhA 3125590 - 3125096 - | hypothetical protein TERM 4085 3125471 - 3125458 - G 78 -6.7 -4.62069 | CCGCCAGGGCAAAAA CGTTC GGCA GAACG TGTAGAATTTCCTGG TERM 4086 3125520 - 3125492 - G 71 -4.6 -4.57341 | overlap 3125493 AATTTCCTGGAAAAA TTTTAGCGCTAA AGCGA TCAGCGCCAAAG AGAGGCCAAAATACA SPA3022 3126323 - 3125808 - | putative ATP-dependent RNA helicase-like protein TERM 4087 3126512 - 3126492 - g 80 -4.8 -4.99972 | AGAAAACAGTAAAAA TTTGTCTC AGGGA AAGACAAA ACTCAGCGATTACGA SPA3023 3126415 - 3126825 + | hypothetical protein SPA3024 3126842 - 3127216 + | hypothetical protein TERM 4088 3127415 - 3127400 - g 85 -6.8 -4.87291 | gap 1, overlap 3127402 TATCCTAAGCAAAAA CAGCCGG CGC CCGGC-G TCCAGGCGAAAATGA TERM 4089 3127414 - 3127402 - g 83 -10.5 -4.05402 | overlap 3127400 TCCTAAGCAAAAACA GCCGG CGC CCGGC GTCCAGGCGAAAATG yghA 3127340 - 3128224 + | oxidoreductase TERM 4090 3128316 - 3128289 - T 100 -9.9 -5.4833 | gap 2 TTAGGCAATAAAAAA GCCGGGT--GGCG ACTT CGCCTTACCCGGC CTACAGCATCAGCAG exbD 3128762 - 3128337 - | biopolymer transport protein ExbD exbB 3129503 - 3128769 - | biopolymer transport protein ExbB SPA3028 3129645 - 3129496 - | hypothetical protein TERM 4091 3130589 - 3130572 - g 74 -7.7 -4.13304 | gap 1, opp_overlap 3130573 AAAGCAGCCTCAAAA TCGCC-GC GTG GCTGGCGA ACCATTCTCAGGTCG metC 3129755 - 3130942 + | cystathionine beta-lyase yghB 3131082 - 3131741 + | DedA family integral membrane protein yqhC 3132722 - 3131805 - | AraC family transcription regulator yqhD 3132897 - 3134060 + | alcohol dehydrogenase dkgA 3134166 - 3134993 + | 2,5-diketo-D-gluconate reductase A TERM 4092 3135015 - 3135034 + F 100 -15 -5.15969 | TTTATCGCACGCCAT GCCCGACG ATGT CGTCGGGC TTTTTTGCATTCCGA TERM 4093 3135123 - 3135140 + F 74 -7.1 -4.37211 | overlap 3135135 GAATTATTCTGATTT TGTGAAT ATTT ATTCACA TTTATTGTGAATTTA SPA3034 3135181 - 3136644 + | membrane transporter TERM 4094 3137128 - 3137109 - g 100 -15 -4.00782 | opp_overlap 3137107 GCAGATGATGAGAAA CTGGCCGC GCTG GCGGCCAG AATTCGTGAGGCATA SPA3035 3136689 - 3137144 + | hypothetical protein ygiR 3139451 - 3137280 - | hypothetical protein SPA3037 3141006 - 3139585 - | hypothetical protein TERM 4095 3139696 - 3139706 + g 70 -3.2 -4.70169 | overlap 3139693 3139691 AATCATGACTTTCCC TCGC AGG GTGA TTTTCTTCCCTATAA TERM 4096 3140922 - 3140940 + g 79 -7.4 -4.41895 | overlap 3140934 AATAGATTTTTTTAT TTTCGCTC TCA GGGCGGAA TTTTAGTTCCGCATT SPA3038 3142495 - 3141071 - | hypothetical protein SPA3039 3143494 - 3142511 - | hypothetical protein TERM 4097 3142953 - 3142966 + g 70 -6.7 -4.21922 | GGATTATGGGTTACC TCGCT TATT AGCGA TTTCGTTTTGGCTAA TERM 4098 3143289 - 3143273 - G 74 -2.2 -5.00616 | opp_overlap 3143274, overlap 3143274 TTGCTGGCTAAAAAA GCGTAC TATCG GTACGT TATGTTGGCGAAGAG sufI 3146459 - 3145047 - | repressor protein for FtsI plsC 3147270 - 3146533 - | 1-acyl-glycerol-3-phosphate acyltransferase TERM 4099 3147472 - 3147429 - R 90 -13.3 -3.61103 | opp_overlap 3147446 3147455, overlap 3147446 TAATCCGATCTGAAA CCGTAGGCCGGATAA-GACGC TACT GCGTCGTCATCCGGCA-ACGG CAGAGCGCCGGATGG TERM 4100 3147455 - 3147491 + r 75 -10.9 -3.10905 | opp_overlap 3147429 3147446, overlap 3147446 ATAAGACGCTACTGC GTCGTCATCCGGC AACGGCAGAGC GCCGGATGGCGGC TTAGATGCCTTGTCC parC 3149785 - 3147527 - | DNA topoisomerase IV subunit A TERM 4101 3149013 - 3149041 + g 74 -8 -4.015 | CCAGAGACCTGATGC GGCAGCGCGGTG ATCAC CACGGCGCCGTC TTCTTTGGTCCATAC TERM 4102 3149885 - 3149847 - R 77 -10.3 -3.31726 | overlap 3149845 3149848 TTGCCGCAGATAATA CCCTATCTCACGGTCTG AGTCA CAAACCGTGAGCCAGGT GACGAGGAAGTTAAC TERM 4103 3149884 - 3149848 - R 83 -13.8 -2.58822 | overlap 3149847 3149845 TGCCGCAGATAATAC CCTATCTCACGGTCTG AGTCA CAAACCGTGAGCCAGG TGACGAGGAAGTTAA SPA3044 3150762 - 3149896 - | AraC family transcription regulator ygiW 3151226 - 3150834 - | hypothetical protein ygiX 3151378 - 3152037 + | DNA-binding transcriptional regulator QseB TERM 4104 3152059 - 3152079 + G 81 -8.3 -4.37527 | overlap 3152062 CGCAACGTCTCAGCC TACGCGTCA GGC TGACGCTTA TTTTCCTGATTCTGG TERM 4105 3152062 - 3152076 + G 86 -10 -4.29049 | overlap 3152059 AACGTCTCAGCCTAC GCGTCA GGC TGACGC TTATTTTCCTGATTC TERM 4106 3152411 - 3152422 + G 81 -2.2 -5.37345 | gap 1, opp_overlap 3152411 TCTGAAGGATGACAA CGACC TCT GG-CG TTTTTTGTGGTTGAA ygiY 3152034 - 3153383 + | sensor protein QseC mdaB 3153490 - 3154071 + | NADPH specific quinone oxidoreductase (drug modulator) ygiN 3154103 - 3154417 + | hypothetical protein parE 3156434 - 3154542 - | DNA topoisomerase IV subunit B TERM 4107 3155257 - 3155279 + g 84 -3.3 -5.40072 | overlap 3155258 GGCAACGCCGGACCG CTGGTGAGC TTTTT GCGCACCAC TTTTTTTGCGGCGCG yqiA 3157043 - 3156462 - | esterase YqiA TERM 4108 3156926 - 3156897 - G 71 -10.8 -3.18239 | gap 1, opp_overlap 3156899 GAGAGATTCCAGCAA CT-CCGCCGCATC GGCAG GATACGGCGGTAG TTGAGGGACGATCAT icc 3157870 - 3157043 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase yqiB 3158317 - 3157895 - | hypothetical protein TERM 4109 3157984 - 3157994 + g 95 -5.4 -5.30616 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTTGGATAA nudF 3158946 - 3158314 - | ADP-ribose pyrophosphatase NudF TERM 4110 3158341 - 3158393 + g 74 -7.7 -4.20712 | opp_overlap 3158358, overlap 3158349 CTCGTTTTTTAACTC TTGATGATGCAACTGAAGCCATTGC AAA GCGATGACTGCGGCTGCGTTGTCGA TTTTCCCCTCTTCTA TERM 4111 3158880 - 3158867 - G 100 -3.7 -5.95166 | opp_overlap 3158868 3158873, overlap 3158868 TCCAATGAAAAAAAA CCGCG ATAG CGCGT TTCCCGTGCAATAAT TERM 4112 3158879 - 3158868 - G 74 -7.2 -4.15473 | opp_overlap 3158868 3158873, overlap 3158867 CCAATGAAAAAAAAC CGCG ATAG CGCG TTTCCCGTGCAATAA TERM 4113 3159075 - 3159099 + H 72 -5.7 -4.42235 | opp_overlap 3159059, overlap 3159077 GCCAACTTTTTGCAG TGGCGGATTCT GCT AGAATCAGCAA TTATTTTTACAAATT tolC 3159153 - 3160622 + | outer membrane channel protein TERM 4114 3160633 - 3160690 + F 100 -22.9 -2.78384 | overlap 3160632 ATTGATAAGTTATTC GCTGGCGCTGCGCTTATCAGACCTGTG CCCT TGTAGGTCTGGTAAGCGCGGCGCTACC TGTCATAAAGCCGCG TERM 4115 3160970 - 3160953 - g 76 -2.7 -5.00616 | opp_overlap 3160953, overlap 3160954 CTGGCTGTGAAAAAA GCGAT GAAACCGT ATCGC TGTATCAAAACGCTG TERM 4116 3160999 - 3160981 - g 71 -6 -4.25283 | ATCGCTGTATCAAAA CGCTGA TGACTGT TCAGCG GCGAATCCGGGCAAA TERM 4117 3161361 - 3161335 - g 71 -4.2 -4.65895 | overlap 3161336 3161338 TGCGGCAGGTAAAAA CTACGGCGCGGC GCA ACCGGGCCGGAC AATGACCGTACCGAA TERM 4118 3161358 - 3161338 - g 71 -10.3 -3.26405 | overlap 3161336 3161335 GGCAGGTAAAAACTA CGGCGCGGC GCA ACCGGGCCG GACAATGACCGTACC TERM 4119 3161481 - 3161454 - g 71 -10.6 -3.24232 | gap 1, opp_overlap 3161458, overlap 3161452 3161450 CCGTCGCCAAACAGA GCACCATGCAGCG TAG CGCTGC-CGGTAC TTCAACACGTTCGAT ygiB 3160835 - 3161506 + | hypothetical protein TERM 4120 3161876 - 3161895 + G 78 -7.1 -4.63184 | ATGCCGACACGCCAA CGTCGCT GTATGA AGCGGCG TTTTTCCAGTGGATT ygiC 3161512 - 3162675 + | hypothetical protein ygiD 3163567 - 3162737 - | hypothetical protein TERM 4121 3163970 - 3163955 - g 80 -4.6 -5.00884 | overlap 3163959 ATCTGGTGCAAAAAA GGCAGC AGCC GCTTCC CGGCTCGATAAAACG ygiE 3163666 - 3164439 + | zinc transporter ZupT TERM 4122 3165316 - 3165306 - g 80 -4.6 -5.11389 | overlap 3165313 AGAATATAAAGAAAA CGGC AAA GCCA TGAAGGATGACTATG TERM 4123 3165532 - 3165510 - g 84 -3.3 -5.36364 | opp_overlap 3165526 3165530, overlap 3165511 CGAAAAAGATAAAAA TGCGGGCAT TCTTG ATGCCGGCC CGGCGGGCGGGGCTT assT 3164962 - 3166758 + | arylsulfate sulfotransferase TERM 4124 3167154 - 3167144 - g 91 -6.8 -5.1925 | opp_overlap 3167143 TCACAATTCAAAAAA GCGA AGT TCGC CTGGTATACGGCTTA SPA3061 3166778 - 3167449 + | dsbA-like protein SPA3062 3167464 - 3168141 + | putative disulfide oxidoreductase TERM 4125 3168191 - 3168156 - T 83 -9 -4.21142 | opp_overlap 3168161, overlap 3168161 ACCTGAATAGATAAA CCAAAGCAGAGGTCTG CATT CAGGCCTCTGCTTTTC TCACAATAATTTTAC TERM 4126 3168186 - 3168161 - T 95 -13.3 -4.20552 | opp_overlap 3168161, overlap 3168156 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4127 3168161 - 3168186 + T 100 -15.5 -4.3898 | opp_overlap 3168161 3168156 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4128 3168268 - 3168287 + T 100 -12.2 -5.02074 | opp_overlap 3168268 AAGGAATACAAAAAA GCCGATGA CATC TCATCGGC TTTTTTCAACCATGA TERM 4129 3168287 - 3168268 - T 100 -12.2 -5.50925 | opp_overlap 3168268 AAGGAATACAAAAAA GCCGATGA CATC TCATCGGC TTTTTTCAACCATGA ribB 3168965 - 3168312 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4130 3168680 - 3168708 + g 77 -8.1 -4.10429 | opp_overlap 3168685, overlap 3168683 3168685 3168701 CTTCAATGGTCACGG TAAAACCGGTGCC GTA GGCGCTGGTGTTG TTTTCCACCATCATT TERM 4131 3168683 - 3168705 + g 74 -7.6 -4.17762 | opp_overlap 3168685, overlap 3168680 3168685 3168701 CAATGGTCACGGTAA AACCGGTGCC GTA GGCGCTGGTG TTGTTTTCCACCATC TERM 4132 3168685 - 3168703 + g 76 -10.2 -3.68435 | opp_overlap 3168685, overlap 3168683 3168680 3168701 ATGGTCACGGTAAAA CCGGTGCC GTA GGCGCTGG TGTTGTTTTCCACCA TERM 4133 3169620 - 3169597 - g 71 -4.4 -4.58395 | overlap 3169598 3169599 CGCACCCGGGAAAAA CTGGCGCTGC TGGA GCAACGCCTC AGCGAACTGGAAGCT yqiC 3169342 - 3169698 + | hypothetical protein TERM 4134 3169729 - 3169702 - T 100 -9.8 -4.90906 | opp_overlap 3169707, overlap 3169703 3169704 CCACAAGAGTAAAAA CGTGAACGGGCC TGAC GGCCCGCTCATA TAAGATCTGAATAAT TERM 4135 3169728 - 3169703 - T 82 -11.1 -3.53459 | opp_overlap 3169707, overlap 3169702 3169704 CACAAGAGTAAAAAC GTGAACGGGCC TGAC GGCCCGCTCAT ATAAGATCTGAATAA TERM 4136 3169727 - 3169704 - T 86 -14.6 -2.70991 | opp_overlap 3169707, overlap 3169703 3169702 ACAAGAGTAAAAACG TGAACGGGCC TGAC GGCCCGCTCA TATAAGATCTGAATA glgS 3169976 - 3169773 - | glycogen synthesis protein GlgS TERM 4137 3170694 - 3170658 - g 75 -13 -2.60512 | gap 1, overlap 3170655 GGGAAGAGGAATTTA TCGGCGGCATGGC-GAT TATT ACCGGCCACGCCGCCGT CGCCGGAACACCTTG SPA3066 3170240 - 3170860 + | hypothetical protein TERM 4138 3170919 - 3170933 + G 77 -11.4 -3.53531 | CATCATGGATGTTTA CCGCCA TCG TGGCGG TTATCGTCTTACTAA yqiK 3170879 - 3172558 + | hypothetical protein TERM 4139 3172579 - 3172600 + T 100 -13.7 -5.9667 | opp_overlap 3172560 CCGCCATATCTCCTG TCCCTGGCC ATAA GGCCGGGGA TTTTTTTATCTTTTT TERM 4140 3172780 - 3172761 - T 86 -11.4 -3.71649 | opp_overlap 3172761, overlap 3172744 3172754 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC TTTAATAAGGAAAGG TERM 4141 3172761 - 3172780 + T 79 -10 -3.72576 | gap 1, opp_overlap 3172744 3172754 3172761 GGCTGAAACGGGAAA GCCCC-TCC CGA GGAAGGGGC TTTAATAAGGAAAGG TERM 4142 3172937 - 3172924 - T 83 -2.3 -5.76949 | TAGGTCGAAAAAAAA GCAGC GTCA ACCGC GAGATACGCGTCGAA rfaE 3174451 - 3173018 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 4143 3174252 - 3174231 - G 72 -11.5 -3.13403 | opp_overlap 3174229, overlap 3174229 3174249 GCGGCGTCATCAATA CCCGTCAGG CCGA CCAGACGGG CGTTCGCTCCCAGAG glnE 3177342 - 3174499 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 4144 3176890 - 3176874 - G 70 -6.5 -4.11216 | overlap 3176877 TGCCCATGCCTAAAA TCAGCAG CGG CTGCGGA ACGCCCTGCGGGTTA TERM 4145 3176927 - 3176877 - G 76 -11.7 -3.09004 | overlap 3176874 CCATGCCTAAAATCA GCAGCGGCTGCGGAACGCCCTGC GGGTT ACAGGGGGTTCCCCATTCGCGGC AACAGGCGGCATACA ygiF 3178761 - 3177460 - | hypothetical protein ygiM 3179003 - 3179617 + | putative signal transduction protein TERM 4146 3179866 - 3179851 - g 70 -9 -3.76176 | CAAACTCACGAAGAA TACGCG CTGG CGCGTA CTGAGCGTAAATCCG TERM 4147 3180088 - 3180098 + G 77 -8.2 -4.08692 | overlap 3180087 3180089 CCCTTGCGCGTATTG CGCG TGG CGCG TTTTGCCGCCCGTTA TERM 4148 3180507 - 3180474 - g 73 -5.1 -4.62471 | gap 1, overlap 3180475 3180476 CTTAACGCCGAAAAA CCTCTGGCCGC-GCCA TCA TGGCCACGGCCCGGCG GGCGTGAAACTGGTC cca 3179680 - 3180921 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 4149 3180954 - 3180923 - T 86 -11.6 -3.64822 | ACCCCGCCAGCTAAA CGCCATCCGGCA CGATAAAT TGCCTGATGGCG CTGCACTTATCAGAC TERM 4150 3181007 - 3180994 - T 73 -9.5 -3.30243 | AGTTAGGCCGGACAA GGCGG TACT CCGCC ATCCGGCACGGTCAA uppP 3181847 - 3181026 - | undecaprenyl pyrophosphate phosphatase TERM 4151 3181404 - 3181378 - G 71 -4.4 -4.55491 | opp_overlap 3181381 3181401 3181403 CAGCCAATCATAAAA GCCTGACGATAC GTC ATATCATCCAGC CCCGGCGCGCGCGGC folB 3182307 - 3181945 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase ygiH 3182411 - 3183022 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 4152 3183238 - 3183260 + T 100 -11.2 -4.7416 | overlap 3183239 TTGCTGTAAATCCGT TGGGGCGGCA TGA TGTCGCCCCC TTTTTCCGCTTTTAC TERM 4153 3183239 - 3183259 + T 93 -14.7 -3.43411 | overlap 3183238 TGCTGTAAATCCGTT GGGGCGGCA TGA TGTCGCCCC CTTTTTCCGCTTTTA gcp 3184285 - 3183272 - | O-sialoglycoprotein endopeptidase TERM 4154 3183695 - 3183663 - G 74 -4.8 -4.77757 | gap 1, overlap 3183667 CCGGAAAAACTAAAA TCCAGCCCCGGACGA TCGG TCATCGGGCGC-GGA AAGACAAAACGTCCC TERM 4155 3184204 - 3184219 + g 84 -3.2 -5.32882 | CCTGACTATACAATT GGTTGG CTAA CAAACC TTTTTTGTCGTCGTA TERM 4156 3184480 - 3184463 - H 74 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3184513 - 3184728 + | 30S ribosomal protein S21 TERM 4157 3184775 - 3184807 + F 80 -7 -4.62475 | gap 1, overlap 3184778 TCGAGTTGTAGTTGT AAGGCCGTGC-TTCC GAAA GGAATGCGCGGCTTG TTTTCGTTTATGCAT TERM 4158 3184778 - 3184804 + F 95 -10.9 -4.40882 | gap 1, overlap 3184775 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTGTTTTCGTTTATG TERM 4159 3185106 - 3185134 + G 70 -5.4 -4.45517 | gap 1, opp_overlap 3185105 3185104 3185122 3185132, overlap 3185122 3185124 ATAATGAGAAAACCC CT-TCTTTCACCG TAAA CGGTGAAAAACAG TTTTATCACTGCTTT TERM 4160 3185410 - 3185427 + G 71 -9.9 -3.61536 | opp_overlap 3185398 AAAGCGCGGTCTGAG CGCTGAA ATTA TTCAGCG TTTCGCCATTGGCTT TERM 4161 3186289 - 3186263 - g 86 -10.8 -4.11216 | CGTTTAGTGCCAAAA CAGGCGGAAAGC GGC GTTTCCCGCCCG GCTCCGCAGCTAAAA dnaG 3184964 - 3186709 + | DNA primase TERM 4162 3186826 - 3186804 - g 74 -10.6 -3.53012 | TGCCCTCGCTTTAAA TGTCGACAGC TAT ACCGTCGACA CCAATCAAACGAATA TERM 4163 3187482 - 3187462 - g 80 -10.3 -3.83155 | overlap 3187464 GACGAAGATGAAGAA GACGGCGAC GAT GACGCCGCC GATGACGACAACAGC TERM 4164 3187483 - 3187464 - g 85 -12.8 -3.49169 | overlap 3187462 CGAAGATGAAGAAGA CGGCGACG ATGA CGCCGCCG ATGACGACAACAGCA rpoD 3186724 - 3188706 + | RNA polymerase sigma factor RpoD TERM 4165 3188743 - 3188726 - T 100 -14.1 -3.95073 | opp_overlap 3188726 CCGCACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTTATCAAGTC TERM 4166 3188726 - 3188743 + T 100 -14.1 -5.626 | opp_overlap 3188726 CCGCACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTTATCAAGTC mug 3189336 - 3188830 - | G/U mismatch-specific DNA glycosylase TERM 4167 3189565 - 3189584 + r 95 -7.8 -5.38054 | opp_overlap 3189562 3189566, overlap 3189566 AAAATCATATAATTA AGCCACTC TAAA GAGTGGCC TTTTTGTTTCTGACA TERM 4168 3189583 - 3189566 - R 82 -11.3 -3.5275 | opp_overlap 3189565 3189566, overlap 3189562 AAATCATATAATTAA GCCACTC TAAA GAGTGGC CTTTTTGTTTCTGAC TERM 4169 3189566 - 3189583 + r 86 -11.3 -3.81748 | opp_overlap 3189566 3189562, overlap 3189565 AAATCATATAATTAA GCCACTC TAAA GAGTGGC CTTTTTGTTTCTGAC yqjH 3190384 - 3189617 - | hypothetical protein TERM 4170 3191027 - 3191013 - g 100 -7.8 -5.40072 | GCGGGCGGAAAAAAA TCGCGA TTA CCGCGA ACGGCGCGCAATGGC TERM 4171 3191174 - 3191122 - g 71 -4.9 -4.67353 | GGAGTTACGTAAAAA TCCGCAGATGAAGC-GGGCGCTGGA TAACT TCAAG-GCCGTGCTGGATCTGCGGA TAAACCACAGCGATA yqjI 3190619 - 3191263 + | hypothetical protein cheM 3192825 - 3191260 - | methyl-accepting chemotaxis protein II TERM 4172 3193186 - 3193146 - R 100 -17.1 -2.78384 | gap 2, opp_overlap 3193142 3193149 3193151, overlap 3193149 3193151 CCGCCTTCTATCAGA GCACATCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGATGT-C ATTACCGTTGCTACC TERM 4173 3193184 - 3193149 - R 100 -19.9 -2.66316 | gap 1, opp_overlap 3193142 3193149 3193151, overlap 3193146 3193151 CCTTCTATCAGAGCA CATCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGATG TCATTACCGTTGCTA TERM 4174 3193149 - 3193184 + r 100 -19.9 -2.75957 | gap 1, opp_overlap 3193149 3193146 3193151, overlap 3193142 3193151 CCTTCTATCAGAGCA CATCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGATG TCATTACCGTTGCTA TERM 4175 3193151 - 3193182 + r 100 -16.7 -2.92246 | gap 1, opp_overlap 3193149 3193146 3193151, overlap 3193149 3193142 TTCTATCAGAGCACA TCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGA TGTCATTACCGTTGC TERM 4176 3193182 - 3193151 - R 100 -16.7 -2.87468 | gap 1, opp_overlap 3193151 3193149 3193142, overlap 3193149 3193146 TTCTATCAGAGCACA TCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGA TGTCATTACCGTTGC air 3194733 - 3193213 - | aerotaxis receptor protein TERM 4177 3196004 - 3195986 - g 70 -6.6 -4.08144 | TGGATGAAGTACAAA CCGGCATG GGG CGTACCGG CAAGATGTTTGCCTG TERM 4178 3196240 - 3196224 - g 75 -5.7 -4.63218 | overlap 3196226 CCTGCTGGAACAAAA CCTCCCG GCC CAGGCGG AACAAAAAGGCGATA TERM 4179 3196259 - 3196249 - g 74 -2.4 -5.07486 | CAGGCGGAACAAAAA GGCG ATA CGCT CCTGGATAGTTTTCG oat 3195136 - 3196542 + | putrescine--2-oxoglutarate aminotransferase TERM 4180 3197863 - 3197837 - g 70 -2.9 -4.70659 | gap 1, opp_overlap 3197821 3197856 3197860, overlap 3197840 3197841 GGCCATACGCAAAAA GAATCTG-GCCG TTGT CGGCGCAGGCCC GGCGGGGCTGGCTTT fadH 3196713 - 3198731 + | 2,4-dieonyl-coa reductase ygjO 3199948 - 3198812 - | hypothetical protein ygjP 3200034 - 3200531 + | hypothetical protein TERM 4181 3201033 - 3201049 + G 90 -4.4 -5.39755 | gap 1, overlap 3201036 GCTGATAGCGAAAGG TGTGCCG GAAG CGGC-CA TTTTTTGTGATTATG ygjQ 3200683 - 3201375 + | hypothetical protein TERM 4182 3201405 - 3201378 - f 74 -6.9 -4.25104 | TTCTCGCCAGTAAAA TGCCAGAGTGC GTCGCA GCGCACTGGCA AGGGCGGAAAGGCGT TERM 4183 3202348 - 3202338 - g 70 -6.8 -4.1899 | opp_overlap 3202343 CCAGCTTATTGAAAA CCAC GCC GTGG AACATCCGGGGTTGT ygjR 3201427 - 3202461 + | oxidoreductase TERM 4184 3202603 - 3202630 + F 93 -12.2 -3.8211 | opp_overlap 3202607, overlap 3202607 GTCACCGGGCAGCCA TAAAGGAATGCG TCAG CGTATTCCTTTA TTGTTGTAAGTGAGA TERM 4185 3202607 - 3202626 + F 81 -8.6 -4.52415 | opp_overlap 3202607, overlap 3202603 CCGGGCAGCCATAAA GGAATGCG TCAG CGTATTCC TTTATTGTTGTAAGT TERM 4186 3202665 - 3202644 - f 86 -14.5 -2.52676 | opp_overlap 3202646 TATTGTTGTAAGTGA GACCTTGCC GAAT GGCAAGGTC TATGCATAAAAGCAG TERM 4187 3202646 - 3202663 + F 74 -11.3 -2.91264 | opp_overlap 3202644 TTGTTGTAAGTGAGA CCTTGCC GAAT GGCAAGG TCTATGCATAAAAGC TERM 4188 3202707 - 3202680 - f 71 -9.8 -3.18788 | opp_overlap 3202681, overlap 3202678 3202677 3202681 CTATGCATAAAAGCA GCGGCTAATGCC ATTC GGCGTTAGCCGT TTTTTTTTGCATGGG TERM 4189 3202706 - 3202681 - f 80 -13.3 -2.50791 | opp_overlap 3202681, overlap 3202680 3202678 3202677 TATGCATAAAAGCAG CGGCTAATGCC ATTC GGCGTTAGCCG TTTTTTTTTGCATGG TERM 4190 3202681 - 3202706 + F 100 -15.5 -6.11644 | opp_overlap 3202681 3202680 3202678 3202677 TATGCATAAAAGCAG CGGCTAATGCC ATTC GGCGTTAGCCG TTTTTTTTTGCATGG ygjT 3202731 - 3203699 + | drug efflux protein TERM 4191 3203733 - 3203759 + F 100 -16.6 -5.28942 | opp_overlap 3203733 CTGCCCCATCAAAAA CGCCCGGCAG CGCACAC CTGCCGGGCG TTTTTGTTTAACATG TERM 4192 3203759 - 3203733 - f 100 -16.6 -4.72272 | opp_overlap 3203733 CTGCCCCATCAAAAA CGCCCGGCAG CGCACAC CTGCCGGGCG TTTTTGTTTAACATG ygjU 3203954 - 3205198 + | serine/threonine transporter SstT TERM 4193 3205244 - 3205203 - f 76 -11.8 -2.54896 | gap 2, overlap 3205199 TGCGTAGCTAAGTGA TTATCG--ATGCCGGATGGC GCGT GCCATCCGGCGTGACGATAA ATCTGAATCTCCCAA TERM 4194 3205769 - 3205785 + G 73 -5 -4.65895 | TGTTTCTGGAAAATG GGCTGC TCCCT GCCGCC TTTTTGCCTGGCGAC TERM 4195 3206010 - 3206036 + G 85 -8.7 -4.45577 | opp_overlap 3206010 3206008 CCTTTTCCATAAACA CGGCCTGTCGG CATTA TTGATAGGCCG TTTTATCGCGTTTGT yqjA 3205648 - 3206310 + | hypothetical protein yqjB 3206314 - 3206697 + | hypothetical protein TERM 4196 3206783 - 3206765 - f 76 -7.4 -4.27441 | opp_overlap 3206764 3206761 3206765 ACTATGATTAATAAA GCGGTG CTTAACC CACCGC GTTATTATCGGGATC yqjC 3206842 - 3207210 + | hypothetical protein yqjD 3207252 - 3207557 + | hypothetical protein yqjE 3207560 - 3207958 + | hypothetical protein TERM 4197 3208044 - 3207988 - g 71 -7.2 -3.99805 | opp_overlap 3208007, overlap 3207983 3208018 CGCGAAAAACGTAAA GCG-CTGCTTCTCAGTCAGATCCAGCAG CAA CGGCTGGATCTGTCCGCC-AGCCGTCGC GACTGGCTGGAGACC yqjK 3207955 - 3208254 + | hypothetical protein TERM 4198 3208271 - 3208308 + F 100 -14.9 -4.45485 | opp_overlap 3208274, overlap 3208274 ATCTTTTCTTTTATA GCATCGCGCCATCAGGT TATC ACCTGGTAGCGCGATAC TTTTATGCATATCGT TERM 4199 3208305 - 3208274 - f 90 -15.2 -2.62184 | opp_overlap 3208274 3208271 TTTTCTTTTATAGCA TCGCGCCATCAGGT TATC ACCTGGTAGCGCGA TACTTTTATGCATAT TERM 4200 3208274 - 3208305 + F 100 -15.2 -3.1919 | opp_overlap 3208274, overlap 3208271 TTTTCTTTTATAGCA TCGCGCCATCAGGT TATC ACCTGGTAGCGCGA TACTTTTATGCATAT TERM 4201 3208444 - 3208419 - g 100 -17.7 -3.35679 | opp_overlap 3208422, overlap 3208422 TCTCTCCAGCGATAA CAATGACGCGC TAAA GCGCGTCATTG CTCATGAAAATAGCA TERM 4202 3208422 - 3208441 + G 87 -13.6 -3.21416 | opp_overlap 3208419 3208422 CTCCAGCGATAACAA TGACGCGC TAAA GCGCGTCA TTGCTCATGAAAATA TERM 4203 3208441 - 3208422 - g 93 -13.6 -3.8211 | opp_overlap 3208422, overlap 3208419 CTCCAGCGATAACAA TGACGCGC TAAA GCGCGTCA TTGCTCATGAAAATA yqjF 3208399 - 3208884 + | hypothetical protein TERM 4204 3208927 - 3208908 - f 89 -6.4 -5.28481 | opp_overlap 3208903 3208908, overlap 3208917 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTTATCTGAAG TERM 4205 3208908 - 3208927 + F 80 -6.4 -4.84311 | opp_overlap 3208908 3208917, overlap 3208903 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTTATCTGAAG yqjG 3208952 - 3209938 + | hypothetical protein TERM 4206 3209944 - 3209961 + F 93 -12.7 -3.73647 | CTTTGGCTAATTTCA GGCGTCC TCCG GGACGCC TTATTAATAAATGCC TERM 4207 3210395 - 3210417 + G 74 -4.8 -4.72272 | opp_overlap 3210395 3210394 ACACCGGGCGACAAC CGCTTCGG CCCCGAT CCGAAACG TTTTTCCTGAGGGCG yhaH 3210062 - 3210427 + | hypothetical protein TERM 4208 3210430 - 3210444 + T 95 -12.8 -4.07568 | overlap 3210431 3210433 ACGTTTTTCCTGAGG GCGGCG CGG CGCCGC TTTTAAAGCGCCGCG TERM 4209 3210431 - 3210464 + T 93 -9.5 -4.64861 | gap 1, opp_overlap 3210452, overlap 3210430 3210433 CGTTTTTCCTGAGGG CGGCGCGGCGCCGCTT TTA AAGCGCCGC-GCGCTA TTTATTTTCCGGCGA TERM 4210 3210433 - 3210462 + T 100 -14.3 -3.93868 | gap 1, opp_overlap 3210452, overlap 3210430 3210431 TTTTTCCTGAGGGCG GCGCGGCGCCGCTT TTA AAGCGCCGC-GCGC TATTTATTTTCCGGC yhaJ 3211362 - 3210466 - | LysR family transcriptional regulator TERM 4211 3210646 - 3210628 - G 72 -11 -3.10796 | TTCCACCATCGAATA TGGCATCG TCG CGACGCCA AGCCCGGCCAGCAGC TERM 4212 3211610 - 3211622 + G 76 -10.5 -3.65542 | opp_overlap 3211598, overlap 3211608 GAACCAGGAAGTGCT GGCGC CGG GCGCC TCTTTTCAGCCTCGA yhaK 3211467 - 3212168 + | hypothetical protein TERM 4213 3212388 - 3212351 - T 82 -11.4 -3.57144 | gap 2 GGCCGCAGCCTGAAA TCATGCCGGATGGCGGCG CAAG CGCC-CGATCCGGC-TGA TAACGGGTAGACCCG TERM 4214 3212432 - 3212454 + T 77 -9 -3.99374 | overlap 3212433 3212450 CATCGGGCAACACGC TGCCCCGACG TCA TGCCGGGGCG TTATTATTAATGCGC TERM 4215 3212433 - 3212453 + T 73 -10.3 -2.99142 | overlap 3212432 3212450 ATCGGGCAACACGCT GCCCCGACG TCA TGCCGGGGC GTTATTATTAATGCG yhaN 3213771 - 3212461 - | hypothetical protein TERM 4216 3214139 - 3214126 - R 70 -5.2 -4.46233 | overlap 3214137 GGAATCCTAAATAAA CGCC AAAGAA GGCG GTCATGACGGCAAAG TERM 4217 3214344 - 3214354 + r 74 -8.2 -3.89346 | opp_overlap 3214331 AACGCGATATTCATG GCGC GCA GCGC TTTATGGCGTGCGAC TERM 4218 3215382 - 3215363 - R 100 -15 -5.58179 | opp_overlap 3215363 TATCACAACAAAAAA GGGCGCAC TTTG GTGCGCCC TTTTCTCAGCTTCTG TERM 4219 3215363 - 3215382 + r 100 -15 -4.43859 | opp_overlap 3215363 TATCACAACAAAAAA GGGCGCAC TTTG GTGCGCCC TTTTCTCAGCTTCTG tdcG 3216807 - 3215443 - | L-serine dehydratase TERM 4220 3216841 - 3216876 + r 78 -11.9 -3.06915 | gap 1, opp_overlap 3216839 CGTTCAGTGAAGATC CGT-CGCGGGGCGATC CACAC GATCGCCCCGTTCACG TTACATCGCCTGAGT tdcE 3219171 - 3216877 - | formate acetyltransferase TERM 4221 3217494 - 3217504 + g 74 -6.8 -4.2558 | opp_overlap 3217484 CAATAGCGAAGTCGA TGGC AAG GCCA TTTTCGTCGCGAATC TERM 4222 3218699 - 3218667 - G 91 -14.1 -3.05294 | opp_overlap 3218657, overlap 3218657 3218648 GCAAACCGGTTAATA CGCCGGATTTACGGC AGC GCAGCATATCCGGCG AGTAAACATCGAATA tdcD 3220413 - 3219205 - | propionate/acetate kinase tdcC 3221811 - 3220480 - | threonine/serine transporter TdcC tdcB 3222821 - 3221832 - | threonine dehydratase TERM 4223 3222472 - 3222482 + g 74 -6.8 -4.35524 | opp_overlap 3222466, overlap 3222466 GCCGAATAATCACAG GTGG CCG CCAC TTTTGACTTTGGCGC tdcA 3223857 - 3222919 - | DNA-binding transcriptional activator TdcA TERM 4224 3224558 - 3224545 - R 80 -5.9 -4.93365 | opp_overlap 3224545 3224546, overlap 3224546 CCTGATAAGCAAAAA CCCGC CGAA GCGGA TTTTATGAAGAGGTG TERM 4225 3224674 - 3224653 - R 100 -10.1 -5.0925 | opp_overlap 3224652 3224653 CTGTAAAAGCAAAAA CCCGCCAGC TTAC ACTGACGGG GTTTATGAAGAGGTG TERM 4226 3224797 - 3224763 - R 75 -10.9 -3.04398 | gap 1, opp_overlap 3224769, overlap 3224769 GCCGCCCTGTAAAAG CA-AAAACCCGCCAGC TTAC ACTGACGGGTTTTATG AAGAGGTGAAACTGA TERM 4227 3224790 - 3224769 - R 100 -10.1 -5.0925 | opp_overlap 3224769, overlap 3224763 CTGTAAAAGCAAAAA CCCGCCAGC TTAC ACTGACGGG TTTTATGAAGAGGTG TERM 4228 3224769 - 3224790 + r 74 -7.2 -4.3739 | opp_overlap 3224769 3224763 CTGTAAAAGCAAAAA CCCGCCAG CTTACA CTGACGGG TTTTATGAAGAGGTG TERM 4229 3224905 - 3224879 - R 73 -10.3 -3.05597 | gap 1, opp_overlap 3224885, overlap 3224885 GCCACCCTGTAAAAG CA-AAAACCCGC CGAA GCGGGTTTTATG AAGAAGTGAAACTGA TERM 4230 3224898 - 3224885 - R 100 -9.5 -5.0925 | opp_overlap 3224885, overlap 3224879 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAAGTG TERM 4231 3224885 - 3224898 + r 87 -9.5 -4.3739 | opp_overlap 3224885 3224879 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAAGTG garK 3226461 - 3225316 - | glycerate kinase I TERM 4232 3225712 - 3225736 + g 70 -9.1 -3.65827 | overlap 3225713 CGCCCCCATACCGCC TGCAGCGCCTG CGC CGGGCGCCGCC TTTACGTCGACATTC TERM 4233 3225713 - 3225735 + g 76 -12.6 -2.79175 | overlap 3225712 GCCCCCATACCGCCT GCAGCGCCTG CGC CGGGCGCCGC CTTTACGTCGACATT TERM 4234 3226550 - 3226522 - R 71 -10.2 -2.64803 | overlap 3226519 3226518 CCAGCCTGAAATTCA GGCCCGGATCGC TACAC GCCATCCGGGCA CAACGTCGTTAGCGA garR 3227449 - 3226559 - | tartronate semialdehyde reductase TERM 4235 3226922 - 3226933 + g 73 -5.8 -4.42788 | CAACGCCACGATCAC CTGG TTAG CCAG TTTTGTGACGTTGCC TERM 4236 3227119 - 3227133 + g 71 -10 -3.57561 | CAACGCCCTTCGCCT TCAGCG CAT CGCTGA TTTCACGGCTTGCCA garL 3228245 - 3227475 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase TERM 4237 3227606 - 3227623 + g 76 -12.7 -2.71712 | opp_overlap 3227604 3227603, overlap 3227591 3227605 CCGGCGCCAGAATGC CGCACGG TTTA CCGTGCG CTTTAGCGCGGGCGA TERM 4238 3227760 - 3227729 - G 90 -8 -4.82901 | TGGGGCCGACAAAAA TGCCATCAACGC CTTCCGTT GCGGCGATGGCA TCAACATTGTCGACA TERM 4239 3227897 - 3227930 + g 84 -13.1 -3.40601 | gap 1, overlap 3227900 3227911 3227921 CGCGAATGCCTTCCG GCGGGTAGCG-CGTCG AGG CGACGGCGCGAGCCGC TTCCTCTTGCGTTTC TERM 4240 3228804 - 3228814 + r 81 -8.2 -4.53303 | opp_overlap 3228803 AAATTCGCCAGGAAT CGCC ATC GGCG TTTTATATAAAAGTA TERM 4241 3229443 - 3229423 - R 89 -8.9 -4.56597 | overlap 3229425 CTCGGTTGCGAAAAA CTGCAGCCG GAA CGACTGCTG GAAGGCACCGAGGAT TERM 4242 3229618 - 3229598 - R 79 -10.3 -3.57263 | AGCGCCAGCGCGAAA CCTGCCCGG CCT CCGAGCTGG TCGTCGGGATGCAAT TERM 4243 3230013 - 3229993 - R 72 -8.2 -3.72893 | opp_overlap 3229975 3229973 CAGCGCCCCACCAAA CGCGGCCT GATTT ACGCCGCG ACGCCCGCCAGCGAT TERM 4244 3230370 - 3230387 + r 79 -7.7 -4.46493 | opp_overlap 3230370, overlap 3230365 AAGCGCCTCGCAAAA CATGGCT TAAG GGCCATG TTTTCATATGTTTGA TERM 4245 3230387 - 3230370 - R 71 -7 -4.08064 | opp_overlap 3230370 3230365 AAGCGCCTCGCAAAA CATGGC TTAAGG GCCATG TTTTCATATGTTTGA SPA3120 3231530 - 3230583 - | carbohydrate kinase agaR 3232374 - 3231541 - | hypothetical protein gatY 3232708 - 3233562 + | tagatose-bisphosphate aldolase TERM 4246 3233815 - 3233799 - g 100 -5.1 -5.52384 | opp_overlap 3233811, overlap 3233813 TGCGTACCAAAAAAA TGCCAGT CAC ACCAGCA TGGGTAGAAGAACCC SPA3123 3233573 - 3234487 + | carbohydrate kinase SPA3124 3234514 - 3235941 + | PTS system, sugar phosphotransferase enzyme IIBC component SPA3125 3235928 - 3236734 + | PTS-transport family phosphoryl transfer protein TERM 4247 3236750 - 3236773 + F 100 -16 -4.72272 | CCTTCATTTGTTCCT CCGTGCCCGC TCCG GCGGGTACGG TTTTTCATGACAAAG TERM 4248 3236922 - 3236911 - f 76 -2.2 -5.29445 | TTCGAAGAAGAAAAA CGAA AGAA CTCG GAGATAAAAGTGAAA TERM 4249 3237355 - 3237373 + G 80 -10.2 -3.85698 | GATCCGATGGTCGTT GCACGCCG TGC CGCCGTGC TTTGTAAAGCAGCAG gatZ 3236932 - 3238203 + | putative tagatose 6-phosphate kinase 1 gatA 3238218 - 3238682 + | galactitol-specific PTS system component IIA gatB 3238713 - 3238997 + | galactitol-specific PTS system component IIB gatC 3239001 - 3240374 + | PTS system, galactitol-specific IIC component gatD 3240418 - 3241461 + | galactitol-1-phosphate dehydrogenase gatR 3241572 - 3242345 + | galactitol utilization operon repressor yraL 3243366 - 3242503 - | hypothetical protein TERM 4250 3243425 - 3243414 - H 79 -3 -5.41143 | overlap 3243417 CATTGCGTAAAAAAA TATC ACTG GATA CAGTATGGTACCCTC TERM 4251 3244506 - 3244466 - gH 80 -9.6 -3.86346 | gap 1, opp_overlap 3244501, overlap 3244467 TCAGCGCGCCACAAA CTCCCCCTGCGCAGCCTGC TACA GCAAGC-GCGCCGGCGGAT CCCTCCGCTGAATTA TERM 4252 3244505 - 3244467 - gH 82 -13.1 -2.91593 | gap 1, opp_overlap 3244501, overlap 3244466 CAGCGCGCCACAAAC TCCCCCTGCGCAGCCTGC TACA GCAAGC-GCGCCGGCGGA TCCCTCCGCTGAATT TERM 4253 3244904 - 3244882 - gH 80 -6.2 -4.8048 | overlap 3244883 GTGTTACAGCAAAAA TTCGGCTCCG TAG CCGAGCTGAA AATGGGCGTGAACGG TERM 4254 3244898 - 3244883 - gH 72 -9 -3.47806 | overlap 3244882 TGTTACAGCAAAAAT TCGGCT CCGT AGCCGA GCTGAAAATGGGCGT yraM 3243430 - 3245481 + | hypothetical protein TERM 4255 3245531 - 3245490 - gf 72 -9.3 -3.61268 | gap 1, overlap 3245482 3245493 CAGCTAACGCGTAAA CAGGCTGGCGACGCGTGGGA AGC TGCCGCGCGTCGCTGGC-TG GAAAGCAAAGGACTG TERM 4256 3245529 - 3245493 - gf 76 -12.1 -2.62667 | overlap 3245482 3245490 CTAACGCGTAAACAG GCTGGCGACGCGTGGGA AGC TGCCGCGCGTCGCTGGC TGGAAAGCAAAGGAC yraN 3245439 - 3245834 + | hypothetical protein yraO 3245856 - 3246446 + | DnaA initiator-associating protein DiaA yraP 3246456 - 3247031 + | hypothetical protein yraR 3247733 - 3247098 - | hypothetical protein TERM 4257 3248022 - 3248005 - g 89 -3.3 -5.72207 | GTGAAAGGAAAAAAA GGCGAGG CCAG CGTCACC ATTGATAAGGCTATT yhbO 3247864 - 3248382 + | hypothetical protein yhbP 3248805 - 3248362 - | hypothetical protein yhbQ 3248843 - 3249160 + | GIY-YIG nuclease superfamily protein yhbS 3249650 - 3249147 - | putative acetyltransferase yhbT 3250168 - 3249644 - | hypothetical protein TERM 4258 3250454 - 3250441 - g 83 -9.5 -4.18018 | opp_overlap 3250441 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4259 3250441 - 3250454 + G 80 -9.5 -4.06491 | opp_overlap 3250441 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4260 3250563 - 3250523 - g 95 -3.4 -5.81412 | gap 2 TTTACCGAAAAAAAA TTGCAG-GAAGC-GGTGA GTTTTGT TCACCAGCATCGCCGCAA ATTACACATCGCCAT yhbU 3250385 - 3251380 + | putative protease TERM 4261 3252195 - 3252183 - g 75 -6.9 -4.4078 | overlap 3252184 3252185 TCGCGCTAACGAAAA CGGCG GCG CGCCA TTACCGCTTGCCGCC yhbV 3251389 - 3252267 + | hypothetical protein TERM 4262 3252331 - 3252348 + T 74 -3.3 -4.9218 | overlap 3252320 3252319 TAGACCCGATAAGCG CAGCGCC ATCG GGCATTG TTTTTGTCGTCAGTC mtr 3254786 - 3253542 - | tryptophan permease TERM 4263 3254868 - 3254902 + r 82 -7.8 -4.55798 | opp_overlap 3254874, overlap 3254870 3254872 3254874 AGTACAAAAGAAATA AAAAAAGCCCCGATTG TGA CGATCGGGGCTGTATA TTTTACTTTACGCTG TERM 4264 3254870 - 3254900 + r 84 -10.4 -3.88396 | opp_overlap 3254874, overlap 3254868 3254872 3254874 TACAAAAGAAATAAA AAAAGCCCCGATTG TGA CGATCGGGGCTGTA TATTTTACTTTACGC TERM 4265 3254872 - 3254898 + r 90 -13 -3.51998 | opp_overlap 3254874, overlap 3254870 3254868 3254874 CAAAAGAAATAAAAA AAGCCCCGATTG TGA CGATCGGGGCTG TATATTTTACTTTAC TERM 4266 3254896 - 3254874 - R 100 -13.4 -6.11392 | opp_overlap 3254872 3254870 3254868 3254874 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT TERM 4267 3254874 - 3254896 + r 100 -15.6 -3.31476 | opp_overlap 3254874, overlap 3254872 3254870 3254868 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT deaD 3256829 - 3254940 - | ATP-dependent RNA helicase DeaD TERM 4268 3255661 - 3255671 + g 73 -5.4 -4.56597 | overlap 3255648 AGTTGCTGCTGAACT TTCG CGG CGAA TTTTTCCAGACGGCG TERM 4269 3256974 - 3256949 - R 73 -7.5 -4.04023 | overlap 3256950 ATTAACGAACAACAA CGCCCTCACCC GCGA AGGTGATGGCA ATCAAAAAGATTACG nlpI 3257892 - 3257008 - | lipoprotein NlpI TERM 4270 3257990 - 3257970 - R 100 -16.1 -3.57792 | opp_overlap 3257963 CCAGCCAGGTCTAAA GCCCCCCGC ACT GCGGAGGGC AAAAGGCTACCTTAC pnp 3260137 - 3258002 - | polynucleotide phosphorylase/polyadenylase TERM 4271 3260356 - 3260340 - R 100 -10.8 -5.00884 | opp_overlap 3260339 3260337 3260340 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC TERM 4272 3260340 - 3260356 + r 71 -10.8 -2.71422 | opp_overlap 3260340, overlap 3260339 3260337 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC rpsO 3260648 - 3260379 - | 30S ribosomal protein S15 TERM 4273 3260483 - 3260504 + g 84 -2.9 -5.34555 | opp_overlap 3260476 3260485, overlap 3260485 3260486 AAACCATACGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTATGCTCTGC truB 3261743 - 3260799 - | tRNA pseudouridine synthase B TERM 4274 3261014 - 3260987 - G 71 -8.4 -3.77588 | opp_overlap 3260992, overlap 3260989 ACGGCAGATTAACAA CAGGATAGTCCG AAGC CGGACTATCCAT TGGCATCAATAATGG TERM 4275 3261012 - 3260989 - G 95 -15.4 -3.46982 | opp_overlap 3260992, overlap 3260987 GGCAGATTAACAACA GGATAGTCCG AAGC CGGACTATCC ATTGGCATCAATAAT TERM 4276 3261600 - 3261632 + g 75 -12.6 -2.6176 | overlap 3261599 GCCGGTCGCCAGCGG GTCCAGCGCGCCGG TATGC CCGGCGCGGTTGGC ATTGTAGATGCGCTT rbfA 3262144 - 3261743 - | ribosome-binding factor A TERM 4277 3262174 - 3262188 + r 88 -8.5 -4.86939 | opp_overlap 3262174 AATAAAGACAAAAAA GGGGC CATAA GCCCC TTTTTAAATTTCTTG TERM 4278 3262188 - 3262174 - R 100 -9.2 -5.61913 | opp_overlap 3262174 AATAAAGACAAAAAA GGGGCC ATA AGCCCC TTTTTAAATTTCTTG infB 3265043 - 3262365 - | translation initiation factor IF-2 TERM 4279 3264231 - 3264242 + g 84 -5.8 -5.00616 | ATCGGCTTTGGATTC GGCA TGTT TGCC TTTTTTCGCCGGACG TERM 4280 3264894 - 3264884 - G 71 -8.2 -3.86015 | TATCGGGGCCAGAAA CCGC TTC GCGG TTCAGGTGCGCCAGT nusA 3266570 - 3265068 - | transcription elongation factor NusA TERM 4281 3266511 - 3266522 + g 75 -3.6 -4.8622 | TTCAAAAATTTTTTC GCGT GGCA GCGC TTTTTCGTTGGAGAC yhbC 3267050 - 3266598 - | hypothetical protein TERM 4282 3267087 - 3267075 - H 93 -6.9 -5.80248 | opp_overlap 3267074 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4283 3267116 - 3267131 + H 72 -10.4 -2.79878 | opp_overlap 3267116, overlap 3267115 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA TERM 4284 3267131 - 3267116 - H 100 -10.4 -5.60689 | opp_overlap 3267116 3267115 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA argG 3267678 - 3269021 + | argininosuccinate synthase TERM 4285 3269038 - 3269053 + T 100 -11.8 -5.24129 | CATTTATCATTCTAA GGCCGC GAAA GCGGCC TTTTTTATGCGCGGA TERM 4286 3269212 - 3269178 - T 82 -11.7 -3.39301 | gap 1, opp_overlap 3269188, overlap 3269188 ATCACAAATAACAGA CGAAAAAAAAGACGCT TTTC AGCGTC-TTTCTTTCG GAATATTGGTACCGA TERM 4287 3269188 - 3269203 + T 86 -9 -4.43208 | opp_overlap 3269178 3269188 ACAGACGAAAAAAAA GACGCT TTTC AGCGTC TTTCTTTCGGAATAT TERM 4288 3269203 - 3269188 - T 100 -9 -5.92337 | opp_overlap 3269188, overlap 3269178 ACAGACGAAAAAAAA GACGCT TTTC AGCGTC TTTCTTTCGGAATAT secG 3269651 - 3269319 - | preprotein translocase subunit SecG TERM 4289 3269854 - 3269839 - R 79 -11.8 -3.14132 | opp_overlap 3269839 TTTTGCGGGCAGTAA GGCGGC AACC GCCGCC TTTTTAGTCACTTAA TERM 4290 3269839 - 3269854 + r 100 -11.8 -4.77157 | opp_overlap 3269839 TTTTGCGGGCAGTAA GGCGGC AACC GCCGCC TTTTTAGTCACTTAA glmM 3271211 - 3269874 - | phosphoglucosamine mutase folP 3272052 - 3271204 - | dihydropteroate synthase TERM 4291 3272117 - 3272098 - R 100 -12.8 -5.86609 | opp_overlap 3272098 TTAAAAAAAGAAAAA CCCCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA TERM 4292 3272098 - 3272117 + r 79 -10.6 -3.6502 | opp_overlap 3272098 TTAAAAAAAGAAAAA CCCCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA hflB 3274091 - 3272157 - | ATP-dependent metalloprotease TERM 4293 3273189 - 3273157 - G 74 -7.5 -4.11394 | opp_overlap 3273179 ACCTGACGGTCAAAA CGGCCAGGACGCAGC AGC GCCGGGTCCAGAACG TCCGGACGGTTAGTT rrmJ 3274821 - 3274195 - | 23S rRNA methyltransferase J TERM 4294 3274723 - 3274735 + g 77 -4.7 -4.84761 | opp_overlap 3274714 3274717, overlap 3274717 TTTAAACCAGGCACG GGAGC GTA GCCCC TTTTTCTGCGCCTGT TERM 4295 3274989 - 3274972 - g 90 -4.9 -5.34309 | gap 1 AGTACTAAACAAAAA CAGCACCT AAA AGGT-CTG GCACATCCGCTCAAG yhbY 3274909 - 3275241 + | RNA-binding protein YhbY TERM 4296 3275327 - 3275354 + T 86 -13.6 -3.25946 | gap 1, opp_overlap 3275334, overlap 3275334 CACGCTCTCTCCGTT GATAAAAGGCCGC TAT GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4297 3275334 - 3275348 + T 100 -12.8 -5.13137 | opp_overlap 3275334, overlap 3275327 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA TERM 4298 3275348 - 3275334 - T 95 -12.8 -4.36914 | opp_overlap 3275334 3275327 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA greA 3275873 - 3275397 - | transcription elongation factor GreA TERM 4299 3275435 - 3275446 + g 77 -7.2 -4.25104 | CTTCGTATTCCACAT CGCC GCCA GGCG TTTTAATCACCACGA TERM 4300 3276003 - 3275976 - H 70 -4.8 -4.46828 | AGAAGCAAAAAAACA CCAACCCGGG CGCGCAGT CCCAGGTCAG CTACAATTTCCTCTT TERM 4301 3276592 - 3276562 - g 71 -7.4 -3.97947 | GCCAGCCACGATAAA GCGCCAGGCTGGCC GTG GAACGACCTGACGC AGTGTTTCAGCGCGC dacB 3276121 - 3277554 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 4302 3277613 - 3277642 + T 76 -7.7 -4.37092 | opp_overlap 3277618, overlap 3277618 3277636 CTACAAAGAACATAA TAAAACGGGCCGC AAAT GCGGCCCGTTGGC TTTTGTAGGCCGGAT TERM 4303 3277637 - 3277618 - T 100 -16.4 -4.94147 | opp_overlap 3277618 3277613 3277636 AAGAACATAATAAAA CGGGCCGC AAAT GCGGCCCG TTGGCTTTTGTAGGC TERM 4304 3277618 - 3277637 + T 100 -16.4 -3.41587 | opp_overlap 3277618, overlap 3277613 3277636 AAGAACATAATAAAA CGGGCCGC AAAT GCGGCCCG TTGGCTTTTGTAGGC obgE 3278857 - 3277685 - | GTPase ObgE TERM 4305 3278035 - 3278051 + g 71 -7.9 -3.94933 | opp_overlap 3278024, overlap 3278032 3278037 ACCAGCGCGGTTTAG CCGCCAG ATC CTGGCTG TATTTTTCCAGTTCG yhbE 3279838 - 3278873 - | hypothetical protein TERM 4306 3279649 - 3279662 + g 75 -3.7 -4.91852 | opp_overlap 3279649 GCTTACGAAAAATAC GCAGC GGCG GCAGC TTTCTTTTTACTGCC TERM 4307 3279919 - 3279939 + r 100 -14 -3.794 | opp_overlap 3279919 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG TERM 4308 3279939 - 3279919 - R 100 -14 -4.75174 | opp_overlap 3279919 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG rpmA 3280225 - 3279968 - | 50S ribosomal protein L27 rplU 3280556 - 3280245 - | 50S ribosomal protein L21 TERM 4309 3281720 - 3281696 - g 76 -9.3 -3.95051 | opp_overlap 3281702, overlap 3281688 GAAGAAGCCGACAAA GCGATATCCGC GTT GCAGATATTGC CGGATACCCCATGGC ispB 3280814 - 3281785 + | octaprenyl diphosphate synthase nlp 3282017 - 3282304 + | DNA-binding transcriptional regulator Nlp TERM 4310 3282345 - 3282317 - T 87 -10.3 -4.08692 | opp_overlap 3282320, overlap 3282320 TAAGTGCCTGTAAAA CAACCCCCGCA TCGCGTT CGCGGGGGTTA TTCAGCGTACAGAAG TERM 4311 3282342 - 3282320 - T 83 -9.8 -4.17048 | opp_overlap 3282320, overlap 3282317 GTGCCTGTAAAACAA CCCCCGCA TCGCGTT CGCGGGGG TTATTCAGCGTACAG TERM 4312 3282320 - 3282342 + T 72 -9.1 -3.63515 | opp_overlap 3282320 3282317 GTGCCTGTAAAACAA CCCCCGC ATCGCGTTC GCGGGGG TTATTCAGCGTACAG murA 3283621 - 3282362 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase yrbA 3283968 - 3283675 - | hypothetical protein TERM 4313 3284093 - 3284111 + r 71 -10.3 -2.62192 | overlap 3284092 3284088 TCATGCGAAGTGTAG GCCGGAT AAACC ATCCGGC ATTCATTACATACGG yrbB 3284413 - 3284117 - | anti-sigma factor antagonist TERM 4314 3284197 - 3284213 + g 74 -2.1 -5.12617 | opp_overlap 3284173, overlap 3284198 TAACGCCAGACAGCG ACACGGC ATT GCCCTGC TTTTTTGCCTGGTTC yrbC 3285048 - 3284413 - | hypothetical protein yrbD 3285618 - 3285067 - | hypothetical protein yrbE 3286405 - 3285623 - | hypothetical protein TERM 4315 3285709 - 3285670 - G 70 -10 -3.3164 | gap 1, opp_overlap 3285682 AATCCAGCCCCAGAA CGGCCAACGATGCGTGAAC CAC GGT-ACGCGTCGTTGCCCG GCTAATCCCGGCAGA TERM 4316 3286277 - 3286264 - G 74 -8.1 -4.0162 | opp_overlap 3286268, overlap 3286249 CGCCCACATTATAAA GCTGG CGCA CCAGC AGCGGCGCATGTTTG yrbF 3287225 - 3286413 - | putative ABC transporter ATP-binding protein YrbF TERM 4317 3287939 - 3287962 + G 73 -8.8 -3.8211 | gap 1, opp_overlap 3287907 CTGGCGGAGCTGCCG CGCGAAGGCGG GCT CC-CCGTCGCG TTCTTATGGCTGGGC TERM 4318 3288178 - 3288140 - g 74 -7.4 -4.07568 | opp_overlap 3288139 3288138, overlap 3288148 GCCGGCGTGCGAAAA GGCGAAAATGATATTGCC GTT GGTAATCTCATTGGCGCC AATATTTTTAATCTC yrbG 3287438 - 3288415 + | putative calcium/sodium:proton antiporter yrbH 3288429 - 3289415 + | D-arabinose 5-phosphate isomerase TERM 4319 3289763 - 3289741 - g 74 -9.8 -3.66844 | opp_overlap 3289746 GGGACAGTCGAATAA GCTGATCGCC TTT AGCGATCTGC TGGAAAAACTGGCCA yrbI 3289436 - 3290002 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase yrbK 3289999 - 3290574 + | hypothetical protein TERM 4320 3290978 - 3290964 - g 73 -5.7 -4.37886 | TTACCGGCGACAAAA TCACC TACCT GGTGA AAGAGCAGAAAATGC TERM 4321 3291079 - 3291065 - g 76 -3.4 -5.05037 | overlap 3291066 CAAGACAAAAACAAA GGCCAG ACT CCGGCG CAAAAGAAGAGTAAC yhbN 3290579 - 3291097 + | hypothetical protein yhbG 3291104 - 3291829 + | putative ABC transporter ATP-binding protein YhbG TERM 4322 3292881 - 3292871 - g 70 -3.2 -4.83169 | overlap 3292880 AGTGGCTGATAAAAA GCCT TGA AAGC CGCAACGACACGCTG TERM 4323 3292914 - 3292880 - g 76 -10.7 -3.61889 | gap 1, overlap 3292871 3292892 TAAAAAGCCTTGAAA GCCGCAAC-GACACGC TGCT GCGCGTCAGTCGCTGC ATCGTCGAGCAACAG rpoN 3291877 - 3293310 + | RNA polymerase factor sigma-54 yhbH 3293333 - 3293620 + | putative sigma(54) modulation protein TERM 4324 3293648 - 3293674 + F 95 -13 -3.92522 | overlap 3293643 3293649 TTAGCCAGTGCAGGA CGGCCTGTTGTG TGA CACAACGGGCCA TTTGTACAGTTAGCG TERM 4325 3293649 - 3293673 + F 100 -16.5 -2.95192 | overlap 3293643 3293648 TAGCCAGTGCAGGAC GGCCTGTTGTG TGA CACAACGGGCC ATTTGTACAGTTAGC ptsN 3293738 - 3294229 + | sugar-specific enzyme IIA component of PTS yhbJ 3294275 - 3295129 + | hypothetical protein TERM 4326 3295180 - 3295161 - g 70 -9.2 -3.75105 | overlap 3295154 TGAAGTCACCAATAA GCTGGGCA TGCA TGCCCGGC CTGCCATGAAGCTTT ptsO 3295126 - 3295398 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) yrbL 3295643 - 3296275 + | hypothetical protein mtgA 3297078 - 3296350 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 4327 3296447 - 3296416 - G 75 -13 -2.59431 | opp_overlap 3296444, overlap 3296412 3296437 3296444 CTGGCGCATAATCCA CGCCTGCCGGCTAC GCAC ATAGCCAGAAGGCG CATTCGCCTTATAGC TERM 4328 3296997 - 3296960 - G 87 -8.3 -4.58663 | overlap 3296983 ATCACCGCCGAAAAA GGCACCGGAACCACGCT AAAC AGCGCAATGCCGCCGCC CCAAAAGACGGCGAG TERM 4329 3297055 - 3297069 + g 73 -9.2 -3.84246 | opp_overlap 3297050 GCGCAAAAACGTTAA CGGCGC GAT GCGTCG TTTGCTCATTCCGCC yhbL 3297728 - 3297075 - | isoprenoid biosynthesis protein TERM 4330 3297935 - 3297957 + r 100 -7.6 -5.77853 | overlap 3297936 3297938 TGGCGCAGTATTCGC GCACCCCGGT CAA ACCGGGGTCA TTTTTTTTCCGCGTT TERM 4331 3297936 - 3297956 + r 89 -11.1 -4.05085 | overlap 3297935 3297938 GGCGCAGTATTCGCG CACCCCGGT CAA ACCGGGGTC ATTTTTTTTCCGCGT TERM 4332 3297938 - 3297954 + r 93 -13.7 -3.60685 | overlap 3297936 3297935 CGCAGTATTCGCGCA CCCCGGT CAA ACCGGGG TCATTTTTTTTCCGC arcB 3300291 - 3297955 - | aerobic respiration control sensor protein ArcB TERM 4333 3299098 - 3299088 - G 70 -5.4 -4.44974 | TCAAATTCCATAAAA TCTG GCG CAGA CGCGTTCCGTCGGTA yhcC 3301314 - 3300385 - | hypothetical protein TERM 4334 3302495 - 3302483 - g 71 -4.8 -4.67353 | CGACGCATTGAAAAA CGTC TGCAG GACG ACAAAGATTTCTACA TERM 4335 3303161 - 3303149 - g 80 -10.5 -3.86822 | GAAGTGGTCGAGAAA GGCCG CGT CGGCC CAGGCGAGCTGATGG TERM 4336 3304308 - 3304292 - g 74 -10.8 -3.55622 | CTGAATCTCTCCAAA CGCGCC TGGCT GGCGCG CAAACCCATTAGCCC TERM 4337 3304793 - 3304779 - g 71 -11.4 -2.90573 | overlap 3304778 TGATTCAGATTAAAG TCGCGC AGG GCGCGA AACCGGGCGAAGGCG gltB 3301985 - 3306445 + | glutamate synthase subunit alpha gltD 3306455 - 3307873 + | glutamate synthase subunit beta TERM 4338 3308309 - 3308325 + G 83 -7.9 -4.56597 | opp_overlap 3308311, overlap 3308311 TCGGTAGATTTAAGT CAGCGCT ATA AGCGCGG TTTTTCCACCAGAAA TERM 4339 3308417 - 3308382 - g 100 -17.2 -3.06696 | gap 1, opp_overlap 3308388, overlap 3308388 TTTGTTTTCAACACA TTGAA-ATTCCGCAGAC ACT GTCTGCGGAATCTTCAA ATCTCATACCGCTCG TERM 4340 3308410 - 3308388 - g 100 -16.4 -3.76775 | opp_overlap 3308388, overlap 3308382 TTCAACACATTGAAA TTCCGCAGAC ACT GTCTGCGGAA TCTTCAAATCTCATA TERM 4341 3308388 - 3308410 + G 100 -16.4 -3.08438 | opp_overlap 3308388 3308382 TTCAACACATTGAAA TTCCGCAGAC ACT GTCTGCGGAA TCTTCAAATCTCATA yhcG 3308081 - 3309184 + | hypothetical protein TERM 4342 3309982 - 3309992 + G 91 -6.8 -5.1675 | AGCGCCGTACTGATT GCGA TGG TCGC TTTTTTCCTCGGTAA codB 3309301 - 3310554 + | cytosine permease codA 3310541 - 3311821 + | cytosine deaminase yhcH 3312370 - 3311903 - | hypothetical protein TERM 4343 3312260 - 3312271 + g 71 -7.2 -3.96327 | opp_overlap 3312258 GCCCTGCAATTCATA GCGC CCCG GCGC TTTCTCCTGCGGCCT nanK 3313242 - 3312367 - | N-acetylmannosamine kinase nanE 3313928 - 3313239 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 4344 3313657 - 3313628 - G 73 -10.7 -3.33737 | overlap 3313619 CATCAACGGCGATAA TAGCTGCGCCAGC CTGC GCCAGCGCATCTA CATCGTCGAGAAAAG TERM 4345 3313971 - 3313945 - R 77 -9.4 -3.86346 | overlap 3313947 CTACTCCCTTACAAA TATTGCCCGGTT GAA AACCGGGCAAGC GGATTAACTTTTCGT TERM 4346 3313969 - 3313947 - R 100 -16.4 -3.52113 | overlap 3313945 ACTCCCTTACAAATA TTGCCCGGTT GAA AACCGGGCAA GCGGATTAACTTTTC nanT 3315465 - 3313975 - | putative sialic acid transporter TERM 4347 3314212 - 3314239 + g 70 -9.7 -3.35679 | CGCTCCCAGGATCGG CGCCAGCGCGC CGCCGA GCGCGCCGACG TTATAAGTAAAGCCC TERM 4348 3314642 - 3314616 - G 71 -11.6 -2.92386 | overlap 3314613 3314611 GGAAAGCAAACAGTA CCACCAGCATCA GCA TGACGCCAGTGG GCCAGCGTTTACCGC nanA 3316474 - 3315581 - | N-acetylneuraminate lyase TERM 4349 3316601 - 3316616 + r 79 -3.2 -5.32608 | overlap 3316595 AACCGGGATCGGAGG TGCGAT CGCT ACCGCA TTTTTTGACTTTTTT yhcK 3317400 - 3316609 - | transcriptional regulator NanR TERM 4350 3317483 - 3317508 + r 76 -7.5 -4.25256 | opp_overlap 3317487, overlap 3317487 GCGAGGAGACCAAAC AAAACAGGCCC TTCA GGGCCTGTTGA TTATTTTACTACGCG TERM 4351 3317504 - 3317487 - R 100 -12.7 -4.97158 | opp_overlap 3317483 3317487 GGAGACCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA TERM 4352 3317487 - 3317504 + r 93 -12.7 -3.70405 | opp_overlap 3317487, overlap 3317483 GGAGACCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA sspB 3318009 - 3317509 - | ClpXP protease specificity-enhancing factor sspA 3318653 - 3318015 - | stringent starvation protein A TERM 4353 3318914 - 3318927 + r 100 -9.5 -5.08824 | opp_overlap 3318914 TTGCCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCTAACAG TERM 4354 3318927 - 3318914 - R 100 -9.5 -5.60993 | opp_overlap 3318914 TTGCCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCTAACAG rpsI 3319358 - 3318966 - | 30S ribosomal protein S9 rplM 3319802 - 3319374 - | 50S ribosomal protein L13 yhcM 3321227 - 3320103 - | putative ATP/GTP-binding protein TERM 4355 3321013 - 3321039 + g 81 -6.6 -4.68994 | CACATATACAGCCCG CGAACCGG TATTTGCGCGT CCGGTTCG TTTTTGCCTAATAAT yhcB 3321414 - 3321818 + | cytochrome d ubiquinol oxidase subunit III TERM 4356 3321843 - 3321861 + F 79 -11.7 -3.13082 | opp_overlap 3321841, overlap 3321841 3321839 GTTAAGAAATTTATC GGGCGCA TCGCT TGCGCCC TCTCTCTATCTTTCC TERM 4357 3322460 - 3322485 + G 78 -11.7 -3.23984 | opp_overlap 3322459 3322458, overlap 3322441 3322483 CGATTCCGACAAACT CCGCGTCGGCG ATTT CGCCGTGGCGG TTGGTAATCCGTTTG TERM 4358 3323199 - 3323173 - g 77 -3.5 -5.02476 | opp_overlap 3323174, overlap 3323174 3323176 ATAGCGTCGAAAAAA GCAGTCCTGCC GCGCA GGCCGGTTTGC AAAAAGATGATGTTA TERM 4359 3323219 - 3323205 - g 83 -7.2 -4.56597 | GCCGGTTTGCAAAAA GATGAT GTT ATCATC GGCGTTAATCGCGAT degQ 3321975 - 3323342 + | serine endoprotease degS 3323435 - 3324505 + | serine endoprotease TERM 4360 3324530 - 3324508 - T 93 -10.6 -4.4078 | opp_overlap 3324492 3324511 GGCGTCGAACTAAAA CGACGCAG CTTTTGC CTGCGTCG TTCGACGGCTAGTCA SPA3217 3325270 - 3324539 - | putative inner membrane protein TERM 4361 3324721 - 3324738 + g 70 -7 -4.07568 | GTTGCGCCTGTTGAC GCGCAT ACTGCG ATGCGC TTTTCCAGGCGACCA TERM 4362 3325255 - 3325279 + g 74 -11.4 -3.20991 | CTGTGTCCTCATTTT GCGGGAGCAG AATCA CTGCTCCCGA TTAGATTGGATTACA oadB 3326573 - 3325290 - | oxaloacetate decarboxylase beta chain TERM 4363 3325448 - 3325477 + g 74 -2.8 -4.92757 | gap 1, overlap 3325453 CCATCGGCACTGCCG ACACCCCGGCTGA ACCTA TCAGC-GGGTTGA TTTTGTTCTTACTGC oadA 3328352 - 3326586 - | pyruvate carboxylase subunit B TERM 4364 3326993 - 3327009 + g 74 -7.2 -4.10453 | opp_overlap 3326992, overlap 3326972 GCAGTGGCTCAAACG CCGCCG GGTTA TGGCGG TTTTCGAGGAATTTC TERM 4365 3327929 - 3327977 + g 71 -7.6 -3.92324 | gap 5, opp_overlap 3327929, overlap 3327962 TGGTGGTGTACGAGA GCGTGCCCTG--GGC-GTGCGC-GC CGTG GCTGCGCACCGCCTGCAGGGCG-GC TTTCATATTGCGCGG oadG 3328610 - 3328368 - | oxaloacetate decarboxylase subunit gamma ttdB 3329383 - 3328766 - | L(+)-tartrate dehydratase subunit beta ttdA 3330282 - 3329383 - | tartrate dehydratase subunit alpha TERM 4366 3331040 - 3331051 + r 78 -5.8 -4.74706 | TGCCGCAGATGAGCA TCGG GAGA CCGA TTTTTGCGTATTCAA SPA3224 3332399 - 3331794 - | transcriptional regulator SPA3225 3333075 - 3332446 - | GntR family transcriptional regulator TERM 4367 3332976 - 3332994 + g 75 -5.9 -4.66537 | CCGCAATACTTTCCT GCGCGAG TTCTT CTCCCGC TTTTATATTGCCGGA TERM 4368 3333178 - 3333159 - R 95 -12.8 -3.98913 | overlap 3333171 TTTACAGTCAAAGAA GCCGGAGC AAAA GCCCCGGC ATCGGGCAGGAACAG mdh 3334133 - 3333195 - | malate dehydrogenase TERM 4369 3333363 - 3333349 - G 70 -5.6 -4.38927 | GGCTGAGAGAAGAAA CGGGCA TAC TGACCG TCGCCTTCCACATAG TERM 4370 3333701 - 3333711 + g 75 -4 -4.95155 | opp_overlap 3333685 CCAGCGTGGTAACGC CAAA CAG TTTG TTTTTGTCGTATACG argR 3334547 - 3335017 + | arginine repressor TERM 4371 3335022 - 3335052 + F 80 -6 -4.95155 | overlap 3335023 3335024 AAGAGCTCTAGTCCC ACTTCCTCCGTCGT CGT ACGGCGGAGGCACC TTTTTGTCCTCTCCC TERM 4372 3335023 - 3335051 + F 75 -9.5 -3.5637 | overlap 3335022 3335024 AGAGCTCTAGTCCCA CTTCCTCCGTCGT CGT ACGGCGGAGGCAC CTTTTTGTCCTCTCC TERM 4373 3335024 - 3335050 + F 81 -13 -2.73099 | overlap 3335023 3335022 GAGCTCTAGTCCCAC TTCCTCCGTCGT CGT ACGGCGGAGGCA CCTTTTTGTCCTCTC TERM 4374 3335256 - 3335246 - f 79 -2.6 -5.27923 | opp_overlap 3335246, overlap 3335251 TAACGTTATAAAAAA TAAA ATT TTTA ATGTCTTTAAAAAGC TERM 4375 3335269 - 3335251 - f 85 -3.3 -5.49579 | opp_overlap 3335246, overlap 3335246 TTATAAAAAATAAAA TTTTTAA TGTCT TTAAAAA GCAGAAACAATTAGC yhcN 3335382 - 3335645 + | hypothetical protein SPA3229 3335749 - 3336015 + | hypothetical protein TERM 4376 3336042 - 3336060 + T 100 -13.1 -5.47914 | CTAACCCGACGACTT GCCCCCG CCTGC CGGGGGC TTTTTTATGCTTTTT yhcO 3336347 - 3336075 - | hypothetical protein TERM 4377 3336291 - 3336304 + g 74 -6.7 -4.3623 | opp_overlap 3336303 CGTCTGCGTAAACTC GCGAT AAAA ATCGC TTTGGTTTTTAATAT TERM 4378 3336367 - 3336380 + r 72 -6.7 -4.30576 | overlap 3336365 AGCCACCATCCCCGA CAGAC AATT GTCTG TTTTACTACTAAGCA TERM 4379 3336437 - 3336454 + r 74 -3.3 -5.03994 | AAACGCTTTTAGCCC CGGAGCA CTCT TGCGCTG TTTTTGTATCTCAAA TERM 4380 3336508 - 3336490 - R 100 -8.1 -5.65177 | opp_overlap 3336490 ATAGTCATAAAAAAA CCGACGC TTTTG GCATCGG TTCTTGTGGGTTAGC yhcP 3338486 - 3336519 - | p-hydroxybenzoic acid efflux subunit AaeB yhcQ 3339424 - 3338492 - | p-hydroxybenzoic acid efflux subunit AaeA TERM 4381 3339071 - 3339112 + g 72 -3.5 -4.72272 | gap 1, overlap 3339072 3339099 CTCTTCCCGGGACAT CGCCTGTACGCCGAGGCG ATTACGG CGAC-CGGCTTCCTGGCG TTTTTCCTGCGCCAG yhcR 3339635 - 3339432 - | hypothetical protein yhcS 3339817 - 3340746 + | putative DNA-binding transcriptional regulator tldD 3342314 - 3340869 - | protease TldD TERM 4382 3341693 - 3341726 + g 70 -8.7 -3.69332 | gap 1, opp_overlap 3341694, overlap 3341694 AATACTCATAACCAA AGCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGCG TTTACCGTCTTCTTC TERM 4383 3341694 - 3341725 + g 72 -12.2 -2.80876 | gap 1, opp_overlap 3341694, overlap 3341693 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4384 3341725 - 3341694 - G 90 -12.2 -4.0127 | gap 1, opp_overlap 3341694 3341693 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4385 3341970 - 3341986 + g 74 -4.4 -4.75776 | gap 1 GTAGAGCGGCTGATG CGCTACG GCGG CG-AGCG TTTTTACCTTGCCTT yhdP 3346259 - 3342459 - | hypothetical protein rnG 3347840 - 3346371 - | ribonuclease G TERM 4386 3346583 - 3346594 + g 75 -5.8 -4.62069 | opp_overlap 3346581 3346583 TGATCTCATAGCAGA CGGT TTCC ACCG TTTTTACCGTCCCGC TERM 4387 3346999 - 3347014 + g 80 -9 -4.20136 | AGTTCAACCTTACGC TCCAGC GCGC GCTGGA TTTCATTTTCCACGT TERM 4388 3347197 - 3347176 - G 71 -10.1 -3.55444 | overlap 3347188 TGCGCATCGGCGAAA TCGCGCAGC ACAC GCTGCGCCA GCGCCAGTTCGCCAT TERM 4389 3347225 - 3347238 + g 71 -4.5 -4.62783 | CATACATCTGGTAGC GCGTT TGCG GACGC TTTTTGCGCTCCATG maf 3348423 - 3347830 - | Maf-like protein TERM 4390 3348164 - 3348178 + g 70 -7 -4.08216 | overlap 3348165 ATTTCTGCGGCATGA GCGGCG TCG CGCGGC TTTTCCAGCACCTCG mreD 3348923 - 3348432 - | rod shape-determining protein MreD mreC 3349975 - 3348923 - | cell wall structural complex MreBCD transmembrane component MreC TERM 4391 3349652 - 3349681 + g 71 -7.7 -3.96148 | overlap 3349660 ACGCAGCGGCGACCC CAGCAGCTCGCGC AACC GCGCGTTCTCCTG TTTGTACTGCCCCAG TERM 4392 3349660 - 3349673 + g 71 -9.5 -3.59024 | overlap 3349652 GCGACCCCAGCAGCT CGCGC AACC GCGCG TTCTCCTGTTTGTAC TERM 4393 3349700 - 3349712 + g 80 -4.8 -5.03715 | overlap 3349710 GTACTGCCCCAGCAT CAGC AGGTC GCTG TTTTTTAGCAGTAAT TERM 4394 3349729 - 3349745 + g 80 -9.3 -4.11216 | opp_overlap 3349728 3349727 TTTTTAGCAGTAATT CCTGGCG CAG CGCCCGG TTTTCCAGCTCAAGC mreB 3351083 - 3350040 - | rod shape-determining protein yhdA 3353331 - 3351391 - | regulatory protein CsrD TERM 4395 3351557 - 3351534 - G 74 -10.2 -3.53012 | CGCCCGTCGCGTAAA CCTGCGTAGG CGTG CCCGCGCAGG CCTCTACCAGACTTT TERM 4396 3351576 - 3351586 + g 74 -6.8 -4.29845 | CTACCAGACTTTGAA CCAG AAG CTGG TTTTCCGTTCGCTTC TERM 4397 3353905 - 3353917 + G 70 -6.9 -4.08945 | overlap 3353906 3353912 GTAACGCCATGATCA TCGGC ACC GCCGG TTTTACCGCCATGCT yhdH 3353535 - 3354509 + | oxidoreductase TERM 4398 3354661 - 3354671 + G 87 -2.4 -5.60993 | GAAGCCGATGTGACT GCGG AAT CGGC TTTTTTTATGCAGCG TERM 4399 3354923 - 3354913 - g 71 -8.2 -3.85698 | overlap 3354914 TTTGGCCTTGATAAA GCCG ACC CGGC GGCCAATGCCGGAAG SPA3244 3354622 - 3355626 + | putative sulfite oxidase subunit YedY SPA3245 3355627 - 3356226 + | putative sulfite oxidase subunit YedZ accB 3356619 - 3357089 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 4400 3357491 - 3357475 - g 81 -3.5 -5.14965 | overlap 3357476 ACCGCGATGAAAAAA GCGGGCG TGC CGACCGT ACCAGGATCTGACGG TERM 4401 3357600 - 3357577 - g 73 -9.4 -3.78775 | opp_overlap 3357597 3357598 CCGGTGATCATCAAA GCGTCCGGCG GCGG CGGCGGCCGC GGTATGCGCGTGGTT accC 3357100 - 3358449 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 4402 3358485 - 3358469 - f 87 -10.8 -4.19506 | opp_overlap 3358469 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG TERM 4403 3358469 - 3358485 + F 100 -10.8 -5.72622 | opp_overlap 3358469 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG yhdT 3358558 - 3358800 + | hypothetical protein TERM 4404 3359613 - 3359633 + G 73 -6.1 -4.4261 | ACCGGGGCATTATTA TCGGTACGA TTG TCGTGGCGA TTTTAATGTTCGGGA panF 3358790 - 3360241 + | sodium/panthothenate symporter TERM 4405 3360315 - 3360345 + G 77 -11.2 -3.57144 | opp_overlap 3360325, overlap 3360320 AGAGCTAAGTGATGC GCTGATGGAAGCGG GCG CCGTTTCCATTACC TTTCAGGATACACAC TERM 4406 3360320 - 3360340 + G 78 -11.9 -3.28001 | opp_overlap 3360325, overlap 3360315 TAAGTGATGCGCTGA TGGAAGCGG GCG CCGTTTCCA TTACCTTTCAGGATA prmA 3360253 - 3361134 + | ribosomal protein L11 methyltransferase TERM 4407 3361144 - 3361163 + F 91 -11.4 -4.36914 | AAATAATTCTTGTCA GCGTGGTC GCCC GGCCACGC TTTTCTCCACACAAC TERM 4408 3361479 - 3361465 - f 80 -5.6 -4.91712 | GGCAATGGAGAAAAA TCACGC GCA GCGGGA AGTGATCTTGTCCTG TERM 4409 3361557 - 3361544 - f 86 -4.5 -5.626 | opp_overlap 3361520 3361544, overlap 3361531 TAGCTTATAAAAAAA GCAGA TTAT TCCGC TTATCTTGTTTCTGG TERM 4410 3361759 - 3361745 - f 76 -4.2 -5.00884 | overlap 3361746 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG yhdG 3361914 - 3362759 + | hypothetical protein fis 3362785 - 3363081 + | DNA-binding protein Fis TERM 4411 3363111 - 3363136 + F 100 -8.2 -5.25803 | opp_overlap 3363111 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATT TERM 4412 3363136 - 3363111 - f 74 -6 -4.56597 | opp_overlap 3363111 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATT TERM 4413 3363335 - 3363345 + F 77 -6.8 -4.40358 | ATGGTGGAATCCTGG GACG AAG CGTC TTTTCTGGCCTGGCT yhdU 3364106 - 3364297 + | putative periplasmic protein TERM 4414 3365894 - 3365927 + G 84 -12.5 -3.43492 | GGCGTACTGAATCCT GACCAGTTTTTACCG CTGG CGGAAAAAACGGGTC TTATCGTCACTATCG SPA3255 3364448 - 3366547 + | diguanylate cyclase/phosphodiesterase domain-containing protein envR 3367212 - 3366550 - | DNA-binding transcriptional regulator EnvR TERM 4415 3367872 - 3367862 - g 76 -5.4 -4.68908 | CGTACTTAAAAGAAA CTTC ACC GAAG GTAGCGATGTAGAGG acrE 3367626 - 3368783 + | transmembrane protein affecting septum formation and cell membrane permeability TERM 4416 3369734 - 3369764 + G 70 -6.8 -4.1021 | overlap 3369724 3369737 AAACTGGCGGAACTG CAGCCTTTCTTCCC TCA GGGAATGAAGGTGG TTTATCCTTATGACA acrF 3368795 - 3371908 + | multidrug transporter acriflavin resistance protein F TERM 4417 3371921 - 3371936 + F 93 -10.4 -4.58395 | opp_overlap 3371919 3371917 3371921 TAACCGGTAAACAGA GGCGTC TTCG GACGCC TTTTTAAACGGTACG TERM 4418 3371936 - 3371921 - f 74 -10.4 -3.25918 | opp_overlap 3371921, overlap 3371919 3371917 TAACCGGTAAACAGA GGCGTC TTCG GACGCC TTTTTAAACGGTACG yhdV 3372145 - 3372366 + | lipoprotein TERM 4419 3372377 - 3372391 + F 95 -12.8 -4.21908 | opp_overlap 3372371 AATGATACATGCAGG CGCGGC AAT GCCGCG TTTTCAGTAATCGTA TERM 4420 3372924 - 3372958 + F 100 -12.3 -4.53602 | gap 1, opp_overlap 3372931, overlap 3372931 CATAGAGAGATAAAC GCAAAAAGGCCCAATC TTTC GATTGGGCCC-TTTGC TTTATTTGATGTACG TERM 4421 3372931 - 3372952 + F 90 -14.5 -3.15242 | opp_overlap 3372931, overlap 3372924 AGATAAACGCAAAAA GGCCCAATC TTTC GATTGGGCC CTTTGCTTTATTTGA TERM 4422 3372952 - 3372931 - f 100 -14.5 -4.85433 | opp_overlap 3372931 3372924 AGATAAACGCAAAAA GGCCCAATC TTTC GATTGGGCC CTTTGCTTTATTTGA TERM 4423 3373034 - 3373048 + F 71 -7.8 -3.99324 | opp_overlap 3373034 TGCGCAACGTTCAAA TCCGCT CCC GGCGGA TTTCTCCTCCTCAGG TERM 4424 3373134 - 3373085 - f 100 -22.5 -2.7035 | opp_overlap 3373089 3373094, overlap 3373089 3373094 3373099 CTCACCGACAGACCA CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTATTTG ATGCCTGGCAGTTCC TERM 4425 3373130 - 3373089 - f 100 -21.9 -2.99545 | opp_overlap 3373089 3373094, overlap 3373085 3373094 3373099 CCGACAGACCACAGA TAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTA TTTGATGCCTGGCAG TERM 4426 3373089 - 3373130 + F 100 -17.5 -3.76224 | opp_overlap 3373085 3373089 3373094 3373099, overlap 3373094 CCGACAGACCACAGA TAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTA TTTGATGCCTGGCAG TERM 4427 3373094 - 3373125 + F 100 -13 -4.9448 | opp_overlap 3373089 3373085 3373094 3373099, overlap 3373089 AGACCACAGATAAAA CAAAAGGCCCTGTC TTCC GACAGGGCCCTTCG TTTTATTTGATGCCT TERM 4428 3373125 - 3373094 - f 100 -17.4 -4.63586 | opp_overlap 3373094 3373089, overlap 3373089 3373085 3373099 AGACCACAGATAAAA CAAAAGGCCCTGTC TTCC GACAGGGCCCTTCG TTTTATTTGATGCCT TERM 4429 3373120 - 3373099 - f 100 -15.9 -5.24647 | opp_overlap 3373094 3373089, overlap 3373094 3373089 3373085 ACAGATAAAACAAAA GGCCCTGTC TTCC GACAGGGCC CTTCGTTTTATTTGA TERM 4430 3376003 - 3376015 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4431 3376557 - 3376581 + F 71 -8 -3.93061 | gap 1, opp_overlap 3376555 3376563, overlap 3376559 3376560 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 4432 3376656 - 3376621 - f 77 -9.2 -4.00532 | opp_overlap 3376623 3376632 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA TTAAGGCAGGTGACT TERM 4433 3378575 - 3378587 + F 71 -7.7 -4.00532 | overlap 3378563 CACCGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4434 3378607 - 3378621 + F 76 -4.2 -5.0916 | opp_overlap 3378607, overlap 3378597 3378608 CTCTTTCAGAGTCAA CCCTGA TTT TCAGGA TTTTTCTCTTCAACC yrdA 3378869 - 3379423 + | putative transferase yrdB 3379656 - 3379399 - | hypothetical protein aroE 3380471 - 3379653 - | shikimate 5-dehydrogenase yrdC 3381048 - 3380476 - | putative ribosome maturation factor yrdD 3381595 - 3381053 - | hypothetical protein TERM 4435 3381103 - 3381117 + g 76 -3.4 -5.10933 | opp_overlap 3381098, overlap 3381104 TGGCGCAAAAGCGCT TCACGC CCT GCGCGG TTTTCTTTTCAATGA TERM 4436 3381469 - 3381433 - G 79 -13.2 -2.76453 | gap 1, overlap 3381435 CCAGAATTTTAACGA TATGCCCGTCCGCCTGA CTTT TCAG-CGGACGAACATA ATCGCATTCCGGATA TERM 4437 3381467 - 3381435 - G 71 -11.4 -2.92513 | gap 1, overlap 3381433 AGAATTTTAACGATA TGCCCGTCCGCCTGA CTTT TCAG-CGGACGAACA TAATCGCATTCCGGA TERM 4438 3381534 - 3381560 + g 71 -4.2 -4.56597 | overlap 3381537 3381549 GAGCGAATTACCAGT TCGGCCCCGCAC TGC GGGCAGGGCTCA TTTTTACGCACCGAA smg 3382095 - 3381622 - | hypothetical protein smf 3383191 - 3382067 - | hypothetical protein def 3383323 - 3383832 + | peptide deformylase TERM 4439 3383894 - 3383916 + G 95 -14.9 -3.23452 | overlap 3383889 GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTAACTTCTGGACAT TERM 4440 3384079 - 3384069 - g 74 -6.8 -4.25104 | TCGTCCTCAGGAAAA CCAG CAT CTGG TGGCTGACTTACATG fmt 3383848 - 3384795 + | methionyl-tRNA formyltransferase TERM 4441 3384812 - 3384830 + F 100 -10.2 -5.54907 | overlap 3384813 GATCACGTCTTTATA CGCCCGGT GTT ACCGGGCA TTTTTATTTTATACA TERM 4442 3384813 - 3384829 + F 100 -13.7 -3.91317 | overlap 3384812 ATCACGTCTTTATAC GCCCGGT GTT ACCGGGC ATTTTTATTTTATAC TERM 4443 3385547 - 3385564 + G 90 -5.5 -5.15167 | CTGTCCAGGATGCCT CTGCGCA GGGA TGTGCGG TTTTTCTTGCTCCTC sun 3384847 - 3386136 + | 16S rRNA methyltransferase B trkA 3386158 - 3387534 + | potassium transporter peripheral membrane component TERM 4444 3387541 - 3387559 + F 100 -11.7 -4.90917 | opp_overlap 3387540 TTCCTCTAATTTAAG GGGCGCT CATTC AGCGCCC TTTTTAATTCCCTTT TERM 4445 3388028 - 3387994 - g 74 -2.1 -5.09426 | gap 1, opp_overlap 3388000 3388005 3388022, overlap 3388000 3388002 CTCAACCGTAAAAAA GCAGAAGA-GCCGGCA GCTC CGCCAGCGCCTTCTAA AGAGGAAGTGTTATT mscL 3387676 - 3388089 + | large-conductance mechanosensitive channel TERM 4446 3388145 - 3388093 - T 93 -13.6 -3.61894 | opp_overlap 3388094, overlap 3388096 3388099 AACCGTTCTTAATAA GCAGAAGGCCAGTGGTAAAAAAGT CACTT ACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG TERM 4447 3388094 - 3388145 + T 73 -10.3 -3.09933 | gap 1, opp_overlap 3388093 3388096 3388099 ACCGTTCTTAATAAG CAG-AAGGCCAGTGGTAAAAAAGT CACTT ACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG TERM 4448 3388142 - 3388096 - T 100 -19.7 -2.93073 | opp_overlap 3388094, overlap 3388093 3388099 CGTTCTTAATAAGCA GAAGGCCAGTGGTAAAAAAGT CACTT ACTTTCTTGCCACTGGCCTCC CAGTTCCCTCGATTA TERM 4449 3388139 - 3388099 - T 100 -17.8 -3.61089 | opp_overlap 3388094, overlap 3388096 3388093 TCTTAATAAGCAGAA GGCCAGTGGTAAAAAAGT CACTT ACTTTCTTGCCACTGGCC TCCCAGTTCCCTCGA zntR 3388777 - 3388352 - | zinc-responsive transcriptional regulator yhdN 3389156 - 3388788 - | hypothetical protein TERM 4450 3389220 - 3389253 + r 79 -11.9 -3.16921 | opp_overlap 3389222 3389230, overlap 3389230 TGGGGTTCAGGAGGA TATAAAAAAACCCGC CGAA GCGGGTTTTTTTACG TTACTACAGATTACT TERM 4451 3389251 - 3389222 - R 100 -16.7 -2.82516 | opp_overlap 3389220 3389230, overlap 3389230 GGGTTCAGGAGGATA TAAAAAAACCCGC CGAA GCGGGTTTTTTTA CGTTACTACAGATTA TERM 4452 3389243 - 3389230 - R 100 -9.5 -5.74122 | opp_overlap 3389230 3389220, overlap 3389222 GAGGATATAAAAAAA CCCGC CGAA GCGGG TTTTTTTACGTTACT TERM 4453 3389230 - 3389243 + r 100 -9.5 -5.54192 | opp_overlap 3389222 3389230, overlap 3389220 GAGGATATAAAAAAA CCCGC CGAA GCGGG TTTTTTTACGTTACT rplQ 3389647 - 3389264 - | 50S ribosomal protein L17 rpoA 3390677 - 3389688 - | DNA-directed RNA polymerase subunit alpha TERM 4454 3389771 - 3389783 + g 76 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC GGTAA GAGA TTTTTTACCCAAGTT TERM 4455 3390718 - 3390700 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3391323 - 3390703 - | 30S ribosomal protein S4 TERM 4456 3390813 - 3390823 + g 70 -6.8 -4.12188 | overlap 3390810 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 4457 3391350 - 3391368 + r 76 -4.4 -5.00616 | opp_overlap 3391350 3391354 AACTAACCTGGAAAA CGAAGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3391746 - 3391357 - | 30S ribosomal protein S11 rpsM 3392119 - 3391763 - | 30S ribosomal protein S13 TERM 4458 3391944 - 3391962 + g 85 -8.8 -4.44667 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTTCTTCAGACA TERM 4459 3392236 - 3392207 - R 100 -12.3 -4.6645 | gap 1 TACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA rpmJ 3392382 - 3392266 - | 50S ribosomal protein L36 secY 3393745 - 3392414 - | preprotein translocase subunit SecY TERM 4460 3393312 - 3393281 - G 80 -10.2 -3.81755 | overlap 3393287 AGCGGTGAAATAGAA TGCAAAGCCTGG ATTCATCA CCAGGCCCTGCA TACCAGGCATATTCG rplO 3394187 - 3393753 - | 50S ribosomal protein L15 TERM 4461 3394133 - 3394146 + g 73 -5.2 -4.59853 | opp_overlap 3394126, overlap 3394126 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3394370 - 3394191 - | 50S ribosomal protein L30 rpsE 3394877 - 3394374 - | 30S ribosomal protein S5 rplR 3395245 - 3394892 - | 50S ribosomal protein L18 rplF 3395788 - 3395255 - | 50S ribosomal protein L6 rpsH 3396193 - 3395801 - | 30S ribosomal protein S8 rpsN 3396532 - 3396227 - | 30S ribosomal protein S14 rplE 3397086 - 3396547 - | 50S ribosomal protein L5 TERM 4462 3396924 - 3396942 + g 71 -6 -4.30987 | TTGCTGTCAGGTCTG CTGCTG CGTTATC CAGCAG TTTCTTGTCAGCGAT rplX 3397415 - 3397101 - | 50S ribosomal protein L24 rplN 3397797 - 3397426 - | 50S ribosomal protein L14 TERM 4463 3397869 - 3397857 - R 81 -3.3 -5.40474 | AGGTCGTTAAAAAAA CCCCA TAT CGAGG GCGCGGCATTATAAC TERM 4464 3397938 - 3397913 - R 100 -12.7 -5.252 | opp_overlap 3397913 3397917 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGCG TERM 4465 3397913 - 3397938 + r 77 -10.5 -3.34895 | opp_overlap 3397913, overlap 3397917 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGCG TERM 4466 3397917 - 3397934 + r 74 -6.9 -4.3255 | opp_overlap 3397913, overlap 3397913 GGTAGAAAAAATAAA CGGCCCA TCGC TGAGCCG TTTATTCGTTGAGAA rpsQ 3398215 - 3397961 - | 30S ribosomal protein S17 rpmC 3398406 - 3398215 - | 50S ribosomal protein L29 rplP 3398816 - 3398406 - | 50S ribosomal protein L16 rpsC 3399530 - 3398829 - | 30S ribosomal protein S3 TERM 4467 3398858 - 3398873 + g 70 -3.2 -4.70626 | overlap 3398859 3398870 TACGCTGCTGCTTTT TCGGTT GAGC AGCCGG TTTTTCCGGTTGTTC rplV 3399880 - 3399548 - | 50S ribosomal protein L22 rpsS 3400173 - 3399895 - | 30S ribosomal protein S19 rplB 3401011 - 3400190 - | 50S ribosomal protein L2 TERM 4468 3401047 - 3401067 + r 75 -9.7 -3.57462 | opp_overlap 3401050, overlap 3401050 CTCAGCGCCGCCGAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3401331 - 3401029 - | 50S ribosomal protein L23 rplD 3401933 - 3401328 - | 50S ribosomal protein L4 TERM 4469 3401901 - 3401913 + g 73 -10.5 -3.42663 | opp_overlap 3401896, overlap 3401900 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3402573 - 3401944 - | 50S ribosomal protein L3 TERM 4470 3402535 - 3402549 + g 82 -5.6 -5.02074 | opp_overlap 3402516 3402534, overlap 3402537 ATCTTCAGTGAAGAT GCGGGT CAT ACCCAC TTTTTTACCGACTAA rpsJ 3402917 - 3402606 - | 30S ribosomal protein S10 TERM 4471 3403184 - 3403199 + H 73 -4 -4.86731 | gap 1 AGATGGTACGCATGG GATGGCG ACG CGC-ATC TTTTCTTTGGAAGGC TERM 4472 3403370 - 3403389 + G 70 -9.2 -3.72588 | TATACGACGCGCGTA CCGGTCTG CTGC CTGACCGG TTTACCTGTCCATTA hopD 3403297 - 3403764 + | Type III leader peptidase bfr 3404237 - 3403761 - | bacterioferritin, iron storage and detoxification protein TERM 4473 3404311 - 3404301 - R 89 -5.4 -5.78622 | GGATGTCAAAAAAAA GAGT GTG ACTC AGGCGATCTCTTTAA yheA 3404504 - 3404310 - | bacterioferritin-associated ferredoxin TERM 4474 3404644 - 3404659 + r 79 -11.8 -3.14878 | opp_overlap 3404644, overlap 3404642 AGCAGGCAACAAAAA GGGCGC CGAA GCGCCC TCTTCAATTCAAAAC TERM 4475 3404659 - 3404644 - R 100 -11.8 -5.11063 | opp_overlap 3404644 3404642 AGCAGGCAACAAAAA GGGCGC CGAA GCGCCC TCTTCAATTCAAAAC tuf 3405873 - 3404689 - | elongation factor Tu TERM 4476 3405918 - 3405893 - R 82 -13.3 -2.78935 | opp_overlap 3405891 ATATTCCTTACTATA GCGCTCTCCCC TTCA GGAGAGAGCAC GGGATTTTGGTTTTT fusA 3408059 - 3405945 - | elongation factor G TERM 4477 3408130 - 3408107 - R 83 -8.9 -4.21275 | gap 1 TTAAGTTATCCAAAA CGGGCGACTT ACCTG AAG-CGCCCG CCTGGTGACTATGAC rpsG 3408626 - 3408156 - | 30S ribosomal protein S7 rpsL 3409096 - 3408722 - | 30S ribosomal protein S12 TERM 4478 3409166 - 3409144 - R 93 -10.6 -4.7268 | AAACACGTAATAAAA CGCCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG yheL 3409509 - 3409222 - | tRNA 2-thiouridine synthesizing protein B yheM 3409873 - 3409517 - | hypothetical protein TERM 4479 3409793 - 3409763 - G 100 -9.8 -5.24129 | gap 1, opp_overlap 3409764 GTCGCTGATAAAAAA GACGCCCAGCGCT TCCGTT AGCGCT-GACGTC GCCAGCAGCGCATCC yheN 3410259 - 3409873 - | hypothetical protein TERM 4480 3409948 - 3409988 + g 71 -8.4 -3.77196 | TAGCGTAAAGCCCGG CTGAAGATTGGCGGAC-GGC AAC GCTAGTCTGCCGG-CTTCAG TTTCATCAATAATAC yheO 3410981 - 3410259 - | hypothetical protein TERM 4481 3410776 - 3410807 + g 70 -6.7 -4.21194 | gap 1 ATTTTACGGCCCGTA TGTTC-GCCATTGG CAATA CGAATGGCTGAACA TTTTAGATCCTGCAA TERM 4482 3411006 - 3410993 - R 78 -6.7 -4.59226 | opp_overlap 3411003 3411004 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTATGTTT TERM 4483 3411247 - 3411226 - R 100 -13 -5.93809 | opp_overlap 3411223 CCTGCATAAAAAAAA CCGCCGCT ATTACA AGCGGCGG CTCTCAGTTTTTATT fkpA 3412076 - 3411258 - | FKBP-type peptidyl-prolyl cis-trans isomerase slyX 3412296 - 3412514 + | hypothetical protein TERM 4484 3412542 - 3412528 - T 100 -8.5 -6.19443 | opp_overlap 3412528 GAGACGAAAAAAAAA GCGGG GTTAA CCCGC TTTTTTTGTGCCCGA TERM 4485 3412528 - 3412542 + T 100 -8.5 -5.60993 | opp_overlap 3412528 GAGACGAAAAAAAAA GCGGG GTTAA CCCGC TTTTTTTGTGCCCGA TERM 4486 3412658 - 3412625 - T 70 -9.5 -3.08314 | opp_overlap 3412626, overlap 3412624 GGCAAGCTTGAAAAT TCCCCGGGAACATAG ATAA CTATGTGACCGGGGT TTGAAAGCGTAGCCA TERM 4487 3412626 - 3412657 + T 90 -13 -3.54424 | opp_overlap 3412625 3412624 GCAAGCTTGAAAATT CCCCGGGAACATAG ATAA CTATGTGACCGGGG TTTGAAAGCGTAGCC slyD 3413294 - 3412704 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4488 3413268 - 3413279 + g 73 -5.8 -4.39989 | overlap 3413252 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT yheV 3413589 - 3413389 - | hypothetical protein kefB 3415405 - 3413600 - | glutathione-regulated potassium-efflux system protein KefB TERM 4489 3414188 - 3414177 - G 77 -7.2 -4.2717 | ATCACCTGACCAAAA CGGC CAAA GCCG ACGACAATTACCTGG yheR 3415956 - 3415405 - | glutathione-regulated potassium-efflux system ancillary protein KefG TERM 4490 3417749 - 3417733 - g 80 -5.1 -4.91109 | overlap 3417734 GGTTCACGACAAAAA GGTCGAA CCG TTCGACG GCGACCTGGAAGATT yheS 3416222 - 3418129 + | putative ABC transporter ATP-binding protein TERM 4491 3418516 - 3418536 + T 78 -6.1 -4.72007 | overlap 3418519 CTGCGTTATGTGATT TAGCGGCAA AGG TTGCCGTGA TTTATTTTCGTCAGC TERM 4492 3418519 - 3418533 + T 71 -10 -3.27205 | overlap 3418516 CGTTATGTGATTTAG CGGCAA AGG TTGCCG TGATTTATTTTCGTC SPA3327 3418826 - 3418515 - | hypothetical protein TERM 4493 3418672 - 3418683 + g 83 -5.8 -4.95896 | AACAAGTAAATGCCG CCAG CTTG CTGG TTTTTCTCGCTTTCT yheT 3419015 - 3420091 + | putative hydrolase TERM 4494 3420226 - 3420202 - g 76 -2.7 -5.06414 | overlap 3420204 3420217 TCGCTTGAACAAAAA GTCGCTGACGT AAA ACGCCAACTGC AATCCGGCGAGGCCG yheU 3420088 - 3420306 + | hypothetical protein TERM 4495 3421186 - 3421200 + G 72 -11.4 -3.14132 | GAGCTGATTATGTTG CCGCTG GTG CAGCGG TTAATGGAAGGCAAA prkB 3420358 - 3421227 + | phosphoribulokinase TERM 4496 3421320 - 3421280 - T 80 -5.4 -5.00895 | CCTACGAGATAAAAA CGGGTAGGCCGGATAA-GGC CAC GCCGCCATCCGGCAT-CACG TGTTACGCCGCAATC yhfA 3421727 - 3421323 - | hypothetical protein crp 3422035 - 3422667 + | cAMP-regulatory protein TERM 4497 3422679 - 3422700 + F 95 -8 -5.30616 | opp_overlap 3422679, overlap 3422671 TTAATTCCGTCAGAA TGGCGCGT TTTATC ATGCGCCA TTTTTGTTTGCATCG TERM 4498 3423504 - 3423562 + G 88 -11.6 -4.12254 | opp_overlap 3423504 3423527, overlap 3423505 3423545 CAGCCATGCGGAAGA GGTGATTCGCTGGAATGCGCAAACGGTC GCC GCCCGTCTGCGCGTGCTGGCGGATGACA TTCTTTATCATCGTC TERM 4499 3423505 - 3423561 + G 91 -15.1 -3.0663 | opp_overlap 3423504 3423527, overlap 3423504 3423545 AGCCATGCGGAAGAG GTGATTCGCTGGAATGCGCAAACGGTC GCC GCCCGTCTGCGCGTGCTGGCGGATGAC ATTCTTTATCATCGT TERM 4500 3423636 - 3423604 - g 95 -10.6 -4.65895 | overlap 3423606 TTCTCCATGGAAAAA CAGATTGGCGCTCT GGAGA AGATCGCCAATCAG CATCCTGAAAATCCG TERM 4501 3423634 - 3423606 - g 90 -11.8 -3.94812 | overlap 3423604 CTCCATGGAAAAACA GATTGGCGCTCT GGAGA AGATCGCCAATC AGCATCCTGAAAATC yhfK 3422716 - 3424803 + | putative inner membrane protein TERM 4502 3424842 - 3424806 - T 77 -11.5 -3.16437 | overlap 3424799 3424798 TACAAAAGGTTAAGA CCGACTGCCGGATGCGC TAC GCTTATCCGGCAATCCG CCATCAGGCAACCAC argD 3426063 - 3424846 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein pabA 3426712 - 3426149 - | para-aminobenzoate synthase component II TERM 4503 3426477 - 3426450 - G 72 -12 -2.73243 | overlap 3426449 ACCGACGCGCCAAAG GCCTGCGCCATC GCCT GATGACCCAGGC AAACGCCCAGCATCG TERM 4504 3426525 - 3426510 - G 71 -10.4 -3.29263 | overlap 3426498 ATACGTCCGGCATAA TGGCGG ATGA CCGCCA GTGAAATGCCAGCGT fic 3427346 - 3426744 - | cell filamentation protein Fic TERM 4505 3427043 - 3427055 + g 70 -3.3 -4.70659 | CCAGATCCTGCATCA GAGCG TTG CCCTC TTTTTCGATATAGGC TERM 4506 3427211 - 3427231 + g 73 -8.9 -3.8377 | GCCCCAGTTCAATCG TGGCGGCGC GGA GCGCGGTCA TTTCATATGCCGCTT yhfG 3427503 - 3427336 - | hypothetical protein TERM 4507 3427601 - 3427581 - R 100 -11.8 -4.46155 | GAGACAGGGAGAAAA CGCGGGCG GCTCG CACCCGCG CAGGCATGTTTTATG ppiA 3428184 - 3427612 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 4508 3428165 - 3428151 - G 77 -7.8 -4.33907 | opp_overlap 3428164 CAGAAAGAGCGAAAA CAGCTG CGA CAGCCG CCAGAGTCGATTTGA yhfC 3428461 - 3429642 + | hypothetical protein TERM 4509 3429681 - 3429646 - f 86 -13.2 -3.35679 | opp_overlap 3429649, overlap 3429647 3429649 GCGGCGCATTGATAA TGATTGCCGGATGGCG ACAT CGCCCTCCGGCACTCT ATCCCCCTCCTGACG TERM 4510 3429680 - 3429647 - f 95 -16.7 -2.61264 | opp_overlap 3429649, overlap 3429646 3429649 CGGCGCATTGATAAT GATTGCCGGATGGCG ACAT CGCCCTCCGGCACTC TATCCCCCTCCTGAC TERM 4511 3429649 - 3429678 + F 82 -13.5 -2.88861 | opp_overlap 3429647 3429646 3429649 GCGCATTGATAATGA TTGCCGGATGGCG ACAT CGCCCTCCGGCAC TCTATCCCCCTCCTG TERM 4512 3429678 - 3429649 - f 82 -13.5 -2.8474 | opp_overlap 3429649, overlap 3429647 3429646 GCGCATTGATAATGA TTGCCGGATGGCG ACAT CGCCCTCCGGCAC TCTATCCCCCTCCTG TERM 4513 3431214 - 3431200 - g 74 -10 -3.74693 | TTCGATGTGACTAAA GGCGAT CTG ATCGCC GCTATCAATAAAGGC TERM 4514 3431277 - 3431266 - g 74 -7.2 -4.08919 | overlap 3431261 AAAGCGGAAACCAAA GCCG GAAC CGGC TGCGGCGGCTGCATC nirB 3429904 - 3432447 + | nitrite reductase large subunit TERM 4515 3432493 - 3432531 + G 77 -7.2 -4.23892 | overlap 3432494 ACATCCTGCCGGGAA CCGGCGTCTGCGCGCTGT CAG GCGGCGAGCAGGTGGCGA TTTTCCGTCCTTACC nirD 3432444 - 3432770 + | nitrite reductase small subunit TERM 4516 3432778 - 3432798 + F 100 -12.5 -5.72118 | overlap 3432779 GCGGTTAATTATTTT TGGGAGGCG CAA CGCCTCCCC TTTTTTGTATTTTTT TERM 4517 3432779 - 3432797 + F 100 -16 -3.9778 | overlap 3432778 CGGTTAATTATTTTT GGGAGGCG CAA CGCCTCCC CTTTTTTGTATTTTT TERM 4518 3432906 - 3432873 - f 72 -8.1 -3.794 | overlap 3432874 CGGCAACTGAGCAAA TCCCCAGGAACATAG TTCA CTATGTGACTGGGGT GAGCGAGGGCAGCCA TERM 4519 3432905 - 3432874 - f 77 -11.6 -2.87319 | overlap 3432873 GGCAACTGAGCAAAT CCCCAGGAACATAG TTCA CTATGTGACTGGGG TGAGCGAGGGCAGCC nirC 3432966 - 3433775 + | nitrite transporter NirC cysG 3433787 - 3435160 + | siroheme synthase TERM 4520 3435197 - 3435161 - f 71 -9.6 -3.27298 | opp_overlap 3435171, overlap 3435162 3435167 TTCTCTAATCATTAA TTAAAATAACGCCCTG TTATT CAGGGCTTTATTTTAC AACTACTCGTAATCT TERM 4521 3435196 - 3435162 - f 80 -13.1 -2.56164 | opp_overlap 3435171, overlap 3435161 3435167 TCTCTAATCATTAAT TAAAATAACGCCCTG TTATT CAGGGCTTTATTTTA CAACTACTCGTAATC TERM 4522 3435191 - 3435167 - f 81 -8.6 -4.47217 | opp_overlap 3435171, overlap 3435162 3435161 AATCATTAATTAAAA TAACGCCCTG TTATT CAGGGCTTTA TTTTACAACTACTCG TERM 4523 3435171 - 3435187 + F 89 -9.4 -4.65933 | opp_overlap 3435167 3435162 3435161 ATTAATTAAAATAAC GCCCTG TTATT CAGGGC TTTATTTTACAACTA TERM 4524 3437197 - 3437148 - f 73 -11.3 -2.53876 | opp_overlap 3437189, overlap 3437157 3437174 TGGTACGCGAATTGA CGGCAACGACGCCCGTATCGCCA ATAC CGGCGATATCGCCGTCGATGGCG CAGGCTCTGCGGCGG TERM 4525 3437189 - 3437215 + F 72 -8.6 -3.71848 | opp_overlap 3437148 CCGGCGATATCGCCG TCGATGGCGCAG GCT CTGCGGCGGCGA TTATTAATGGCGACA bigA 3439234 - 3441453 + | putative surface-exposed virulence protein TERM 4526 3441503 - 3441482 - T 100 -14.5 -4.34759 | opp_overlap 3441482 TATAACACTAATAAA GGCCGCTTA TTAT TAAGCGGCC TTTTTAAATCATATC TERM 4527 3441482 - 3441503 + T 100 -14.5 -4.69664 | opp_overlap 3441482 TATAACACTAATAAA GGCCGCTTA TTAT TAAGCGGCC TTTTTAAATCATATC TERM 4528 3441858 - 3441844 - T 100 -11.4 -5.76633 | opp_overlap 3441844 GCAGATACAAAAAAA CCGGGA TTT TCCCGG TTTTTTTACAGGTCT TERM 4529 3441844 - 3441858 + T 100 -11.4 -5.42862 | opp_overlap 3441844 GCAGATACAAAAAAA CCGGGA TTT TCCCGG TTTTTTTACAGGTCT trpS 3442965 - 3441961 - | tryptophanyl-tRNA synthetase gph 3443716 - 3442958 - | phosphoglycolate phosphatase rpe 3444386 - 3443709 - | ribulose-phosphate 3-epimerase TERM 4530 3444391 - 3444403 + r 75 -6.3 -4.43307 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTCTTGCAGG dam 3445240 - 3444404 - | DNA adenine methylase TERM 4531 3444766 - 3444778 + g 74 -3.3 -4.83615 | opp_overlap 3444764 3444767, overlap 3444767 ACTCACAGTAAAAGA ACGCA TTC TGCGC TTTTTCTGCAAAGTG TERM 4532 3444777 - 3444767 - G 74 -6.8 -4.29302 | opp_overlap 3444767 3444766, overlap 3444764 CTCACAGTAAAAGAA CGCA TTC TGCG CTTTTTCTGCAAAGT TERM 4533 3445124 - 3445103 - G 83 -7.3 -4.60073 | overlap 3445104 3445118 GATATAACGAGAAAA GTCGGTGTT AAGA AACACCGAT CCGGCACCCACAAAA TERM 4534 3445123 - 3445104 - G 73 -10.8 -3.34959 | overlap 3445103 3445118 ATATAACGAGAAAAG TCGGTGTT AAGA AACACCGA TCCGGCACCCACAAA damX 3446695 - 3445421 - | hypothetical protein TERM 4535 3445882 - 3445912 + g 71 -6.1 -4.25681 | gap 1, overlap 3445877 CCGGTTTCTTCGGCT CCGCAG-TCGTGGT TTTC GCCGTGGTCTGCGG TTTCTTAGGTTCAAT TERM 4536 3446418 - 3446434 + g 74 -2.2 -5.09426 | gap 1, overlap 3446420 3446421 ATGTACTGACGAGAG GCTGGCT TATG GGCC-GC TTTTTTACGCTTACG TERM 4537 3446775 - 3446755 - R 75 -2.6 -5.15969 | CCTGAAGCTAAAAAA CTGACATC TACGC AATATCAG TCTGACCTTTCTTGT aroB 3447881 - 3446793 - | 3-dehydroquinate synthase TERM 4538 3447827 - 3447805 - G 85 -12.8 -3.53712 | overlap 3447801 3447823 AGCGGCAAGAATGAA GCTGGTTCGT TAA ACAAACCAGC CGCGATGGTGATCGG aroK 3448459 - 3447938 - | shikimate kinase I hofQ 3450162 - 3448924 - | outer membrane porin HofQ TERM 4539 3449090 - 3449076 - GR 82 -5.6 -5.00616 | opp_overlap 3449089 TTTTTCGCGAAAAAA TGCCGC CCA GCGCCA GCGTCTCGCCGCTTT yrfA 3450478 - 3450077 - | hypothetical protein yrfB 3450941 - 3450468 - | hypothetical protein yrfC 3451464 - 3450925 - | hypothetical protein TERM 4540 3450997 - 3451015 + g 74 -10.2 -3.53224 | CCCTTGCGCATCCTG CCGCGTGG CGC CCGTGCGG TTTAGCGGAAAACTG TERM 4541 3451364 - 3451338 - G 76 -2.8 -5.00616 | opp_overlap 3451342, overlap 3451342 CCTCCTGCCAAAAAA CCAACCGGGCGA TCG TCGCGAGGCTTG CTATCAGCAGCAGGG TERM 4542 3451781 - 3451746 - H 74 -10.5 -3.21194 | gap 1, overlap 3451747 TATAAACGGCAGCAA GC-GCTGTAACGCGCA GGCAT CGGGCGTTACAGCAGC GATGCGCACATTGAG TERM 4543 3451779 - 3451747 - H 70 -10.6 -2.52234 | overlap 3451746 ATAAACGGCAGCAAG CGCTGTAACGCGCA GGCAT CGGGCGTTACAGCA GCGATGCGCACATTG TERM 4544 3453752 - 3453724 - g 70 -9.5 -3.32159 | TCAGAGTAAATTTAA CCGCGCGACGCAA GCT TTGCGTCAGGTGG GGTCGAACATCAAAC TERM 4545 3454378 - 3454357 - g 70 -6.5 -4.07568 | GCTGGTCGCGCAAAA CGGCACGCA AGAG TACGCACCG CATGTGATTAATACG TERM 4546 3454392 - 3454402 + G 74 -8.2 -3.96148 | opp_overlap 3454392 3454390 CGCATGTGATTAATA CGCC GCT GGCG TTTCTGATCAAAAGC mrcA 3452339 - 3454915 + | peptidoglycan synthetase TERM 4547 3454917 - 3454944 + T 86 -11.4 -3.81755 | opp_overlap 3454924, overlap 3454924 AGGAACTGTTCTGAT CAAAAAAGGCGC TCCG GCGCCTTTTTTA TTGTGTTTGCCGGAT TERM 4548 3454924 - 3454937 + T 100 -9.5 -5.66338 | opp_overlap 3454924, overlap 3454917 GTTCTGATCAAAAAA GGCGC TCCG GCGCC TTTTTTATTGTGTTT TERM 4549 3454937 - 3454924 - T 100 -9.5 -5.14563 | opp_overlap 3454924 3454917 GTTCTGATCAAAAAA GGCGC TCCG GCGCC TTTTTTATTGTGTTT nudE 3455574 - 3455011 - | ADP-ribose diphosphatase NudE TERM 4550 3455630 - 3455647 + H 90 -9.9 -4.54343 | opp_overlap 3455619 CATACCGCACGGTTT CGGCAAT GCGA ATTGCCG TTTATTTACATTTAT TERM 4551 3456551 - 3456569 + G 72 -2.4 -4.85599 | overlap 3456552 TTGTTATTCTTTTTC TGTCTG ATAACGC CAGACG TTTTTGTACCGTGGA TERM 4552 3456844 - 3456858 + G 81 -3.5 -5.28176 | gap 1, overlap 3456844 3456845 CCTTGATCGCCATGT C-GCCC GCCA GGGCCG TTTTTTATCCCTGCA yrfF 3455897 - 3458029 + | hypothetical protein TERM 4553 3458350 - 3458370 + G 77 -8.1 -4.07885 | TTTGCGCCATGACGA CGGCGCAAG GGC CGCGCGCCG TTTTGCGCGACGATA yrfG 3458052 - 3458762 + | putative hydrolase TERM 4554 3458799 - 3458784 - g 77 -4.6 -4.93877 | overlap 3458786 CGCCATGAAAGAAAA GTCCTC CGTT GAGGTC AGACTGGATAAATGG TERM 4555 3458859 - 3458840 - g 74 -7 -4.36914 | CGCGTTTTTATAAAA CCCGCGCG CTGG CCCGCGAG ATGATTGAAGGCGGT TERM 4556 3459080 - 3459065 - g 85 -4.6 -5.16472 | overlap 3459067 AAAAACGCGAAAAAA TGGCGC AGGC GCGCAA GCTTAACGCCCTGAC hslR 3458773 - 3459174 + | ribosome-associated heat shock protein Hsp15 hslO 3459199 - 3460077 + | Hsp33-like chaperonin TERM 4557 3460115 - 3460162 + T 87 -11.5 -3.86346 | gap 1, opp_overlap 3460159, overlap 3460160 ATTGCCTGATGGCGC TGCGCTTATCTGGCCTACAG CATCCCGCT CCGTAGGCCGGATAAG-GCA TTTATGCCGCCATCC yhgE 3461897 - 3460188 - | hypothetical protein TERM 4558 3462124 - 3462112 - H 71 -3.3 -4.77165 | TTTTCCACAACAAAA GTAGG TTT CCTGC CATAATAACCGCCGC TERM 4559 3463814 - 3463801 - g 72 -3.8 -4.74801 | overlap 3463803 3463805 CAATGGCAGGAAAAA GCCA CCGCGC TGGC GAAACTGTTCATTGA pckA 3462277 - 3463896 + | phosphoenolpyruvate carboxykinase TERM 4560 3463970 - 3463945 - T 90 -13.4 -3.61517 | opp_overlap 3463935 3463945 3463949, overlap 3463949 ATCCGGCGTTAAGAA GAAAGGGAGG GTAATA CCTCCCTTTC TTATGCCTCTTTTGT TERM 4561 3463945 - 3463970 + T 90 -13.4 -3.4799 | opp_overlap 3463945 3463949, overlap 3463935 3463949 ATCCGGCGTTAAGAA GAAAGGGAGG GTAATA CCTCCCTTTC TTATGCCTCTTTTGT TERM 4562 3463966 - 3463949 - T 81 -8.4 -4.44667 | opp_overlap 3463949 3463945 3463935, overlap 3463945 GGCGTTAAGAAGAAA GGGAGG GTAATA CCTCCC TTTCTTATGCCTCTT TERM 4563 3463949 - 3463966 + T 79 -8.4 -4.35091 | opp_overlap 3463945 3463949, overlap 3463945 3463935 GGCGTTAAGAAGAAA GGGAGG GTAATA CCTCCC TTTCTTATGCCTCTT envZ 3465323 - 3463971 - | osmolarity sensor protein ompR 3466039 - 3465320 - | osmolarity response regulator TERM 4564 3466447 - 3466423 - g 90 -5.7 -5.22006 | gap 1 TCAGTATAATAAAAA GCGCCTG-CG TGAGAT CGACAGACGC GTCAGATATCTGACC greB 3466265 - 3466738 + | transcription elongation factor GreB TERM 4565 3468412 - 3468393 - g 77 -8.6 -4.10161 | gap 1 CATGATGGCGCAAAA CATCGTCGC CTG GCG-CGATG AGAACGGTCAGTTCC TERM 4566 3468731 - 3468709 - g 78 -6.8 -4.62904 | opp_overlap 3468708 3468709 3468712, overlap 3468710 AAAGAGCTGGAAAAA CCGGGCCGCG ACC CGCGTCCTGA ATTTAAAACCGCGCA TERM 4567 3469040 - 3469019 - g 89 -13.7 -3.54307 | gap 1 AACAGCCCGGCGAAA CCGCCGCTCG TCG CG-GCGGCGG TGCCGATCGCGCTCA TERM 4568 3469090 - 3469078 - g 70 -6.9 -4.07568 | CGCCCGGCGTCAAAA GCGGC GAA ACCGC GCGGTCGTGACGCCC yhgF 3466837 - 3469167 + | putative transcription accessory protein TERM 4569 3469177 - 3469210 + F 95 -13.1 -4.14739 | opp_overlap 3469178, overlap 3469178 CGCTAATCGGGTAAT ACGCAGGCCGGGTTA CTTC TTATCCGGCCTGCGA TTTTGCAATACGTCC TERM 4570 3469209 - 3469178 - f 88 -14.4 -3.04322 | opp_overlap 3469177 3469178 GCTAATCGGGTAATA CGCAGGCCGGGTTA CTTC TTATCCGGCCTGCG ATTTTGCAATACGTC TERM 4571 3469178 - 3469209 + F 100 -16.6 -3.08522 | opp_overlap 3469178, overlap 3469177 GCTAATCGGGTAATA CGCAGGCCGGGTTA CTTC TTATCCGGCCTGCG ATTTTGCAATACGTC TERM 4572 3469415 - 3469398 - f 73 -4.2 -4.7908 | AAAAAGACAAATAAA TGTTGA GCCATA TCAACA TCGGCGCAAATTATC feoA 3469604 - 3469831 + | ferrous iron transport protein A TERM 4573 3469873 - 3469859 - g 89 -2.8 -5.56112 | opp_overlap 3469859 ATAAAAATGAAAAAA TTAACC ATT GGTTTA ATTGGTAATCCTAAT TERM 4574 3470697 - 3470708 + G 100 -5.8 -5.84381 | TCCTGAACCGCTTCC TCGG CTTA CCGA TTTTTTTGTTCGTGA feoB 3469850 - 3472168 + | ferrous iron transport protein B yhgG 3472181 - 3472417 + | hypothetical protein TERM 4575 3472423 - 3472454 + F 72 -10.2 -2.924 | gap 1, overlap 3472422 CTTGCGTTGACCTTT GCCGGGTAGCGACGT AAC GCGTC-TTATCCGGC CTTTATCCCGCGTTA TERM 4576 3472472 - 3472501 + F 100 -15.1 -4.57755 | gap 1 TTATCCCGCGTTATA TTGCCCGGTACGCG TCA CGC-TGCCGGGCAA TTTTGTGTCATGCCT TERM 4577 3473080 - 3473110 + G 71 -8.2 -3.8647 | TGAATTTGCCGACCC GGTGATGGCGCGTA AGC TATACGCCACCGCC TTTCCTCTGGTCGAT SPA3373 3472652 - 3473578 + | hypothetical protein bioH 3474384 - 3473614 - | carboxylesterase BioH TERM 4578 3473874 - 3473897 + g 75 -6 -4.62069 | gap 1 GCACCTCTACATCCG GCATAG-GCTG CGC CAGCACTACGC TTTTTAAGGTGCGGG TERM 4579 3474607 - 3474593 - g 71 -4.9 -4.56597 | opp_overlap 3474594, overlap 3474594 CGCTGCCTGCAAAAA CCGCC GCCCT GGCAG CGTCTGGTGAGCGTC yhgH 3474422 - 3475105 + | gluconate periplasmic binding protein yhgI 3475164 - 3475739 + | putative DNA uptake protein TERM 4580 3475757 - 3475785 + F 72 -8.8 -3.48276 | gap 1, overlap 3475758 TTTTCCCCGCATCCA TGCCCGAT-GGCG CTTG CGCCTGTCGGGCC TTGTCTGCCCCACCG TERM 4581 3475758 - 3475784 + F 78 -12.3 -2.68823 | gap 1, overlap 3475757 TTTCCCCGCATCCAT GCCCGAT-GGCG CTTG CGCCTGTCGGGC CTTGTCTGCCCCACC gntT 3476116 - 3477432 + | high-affinity gluconate transporter TERM 4582 3477525 - 3477550 + T 100 -17.7 -3.62255 | opp_overlap 3477529, overlap 3477529 GTGCTCTCACCATCA TAAAGCCGGGG AAAT CCCCGGCTTTA TTACTTCTTCTTCGC TERM 4583 3477546 - 3477529 - T 100 -14.1 -3.99324 | opp_overlap 3477529 3477525 TCTCACCATCATAAA GCCGGGG AAAT CCCCGGC TTTATTACTTCTTCT TERM 4584 3477529 - 3477546 + T 100 -14.1 -4.4078 | opp_overlap 3477529, overlap 3477525 TCTCACCATCATAAA GCCGGGG AAAT CCCCGGC TTTATTACTTCTTCT malQ 3479629 - 3477551 - | 4-alpha-glucanotransferase TERM 4585 3479100 - 3479068 - G 73 -9.1 -3.89822 | overlap 3479096 3479097 GATTCACCGGATAAA GCGCGTGGATCGG GTTCAGG CCGATAAACGCGC CGCCGCGTGTCGCCA TERM 4586 3479429 - 3479439 + g 81 -2.4 -5.40072 | ACCGCGCCCCTCTAC CGGC AAC GCCA TTTTTTTACCCGCGG malP 3482032 - 3479639 - | maltodextrin phosphorylase TERM 4587 3481217 - 3481231 + g 76 -2.8 -5.00884 | GCACTGGAAGTATTG CTGC ATCAGGC GCAG TTTTTTGCCCGCCGT TERM 4588 3483044 - 3483054 + G 74 -2.4 -5.06816 | ATCCGGTGATTCACG ACGC GAT GCGC TTTTTCTTACGGCAT TERM 4589 3483417 - 3483431 + G 85 -4.2 -5.26875 | ACTGGATAACGTGGA TGTCAG CAC CCGACA TTTTTTACTTAAAAG TERM 4590 3484873 - 3484860 - g 71 -4.5 -4.56775 | gap 1, opp_overlap 3484860 ATCCGGGCGGAAAAA CGACGC CCA GCG-CG TATTGCTTGATGCCT malT 3482626 - 3485331 + | transcriptional regulator MalT TERM 4591 3485347 - 3485401 + T 72 -5 -4.57073 | overlap 3485335 3485350 3485351 CGTGTGCCTGATGGC GCTTCGCTTATCAGGCCTACCATC GCGCGCA GAGTGTAGGCCTGATAAGACAGTC TTTTTAGCACAGCTC glpR 3486163 - 3485405 - | DNA-binding transcriptional repressor GlpR TERM 4592 3485917 - 3485929 + g 100 -9.1 -5.16151 | GGGCCGCGACTTTGC GAGCG ATG CGCTC TTTTTCTTCCGTTTG glpG 3487086 - 3486256 - | intramembrane serine protease GlpG glpE 3487488 - 3487162 - | thiosulfate sulfurtransferase TERM 4593 3487379 - 3487369 - G 71 -8.2 -3.76952 | GTTAGTCAAGTGAAA CGCC TGC GGCG CATGACCCATGGCAT TERM 4594 3488724 - 3488712 - g 74 -6.9 -4.3129 | opp_overlap 3488711 3488712 3488710, overlap 3488714 TATTCATGATGAAAA CGGCA AAG CGCCG CTGCTTTCCGTGTTT glpD 3487687 - 3489195 + | glycerol-3-phosphate dehydrogenase TERM 4595 3489232 - 3489202 - T 73 -4 -4.82901 | gap 2, overlap 3489203 GCGTCCTGAGAAAAA TGCCGGAT--GGCG GCTAA CGCCTGATCCGGCC TACAAGGATACATAA glgP 3491734 - 3489287 - | glycogen phosphorylase TERM 4596 3490325 - 3490337 + g 71 -10.5 -3.18681 | CGCCAGCCAGCGGCG CGGCG TAA CGCCG TTAGTGACGTTACAA TERM 4597 3490860 - 3490833 - G 100 -15.6 -3.33492 | overlap 3490834 3490836 TTATGCAGTTGATAA TGACGGTGCAGG ATAT CCTGCACCGTCG CCGAGACCAGAAAAT TERM 4598 3490859 - 3490834 - G 100 -19.1 -2.59881 | overlap 3490833 3490836 TATGCAGTTGATAAT GACGGTGCAGG ATAT CCTGCACCGTC GCCGAGACCAGAAAA TERM 4599 3490857 - 3490836 - G 86 -15.9 -2.83822 | overlap 3490834 3490833 TGCAGTTGATAATGA CGGTGCAGG ATAT CCTGCACCG TCGCCGAGACCAGAA TERM 4600 3490893 - 3490875 - G 79 -7.4 -4.50976 | GCCGAGACCAGAAAA TACTCCTG GCG CAGGCGTA GCTCTCGTCCGGAAT glgA 3493187 - 3491754 - | glycogen synthase TERM 4601 3491895 - 3491875 - G 72 -4 -4.75289 | gap 2, overlap 3491876 3491878 3491879 GACCACAACACAAAA GC-ACGC-CG AAT CGCGCGTAGC AACGACCAGGCATTA glgC 3494482 - 3493187 - | glucose-1-phosphate adenylyltransferase glgX 3496473 - 3494497 - | glycogen debranching enzyme TERM 4602 3496330 - 3496298 - G 71 -10 -3.48276 | overlap 3496301 3496310 GCGCCTGCCAGATAA CCATGCCAG-ACATCG CCG CGACGTCCTGGCA-GG TCATAGCGACGCTCA TERM 4603 3496328 - 3496301 - G 71 -11.4 -2.88822 | gap 1, overlap 3496298 3496310 CCTGCCAGATAACCA TGCCAG-ACATCG CCG CGACGTCCTGGCA GGTCATAGCGACGCT TERM 4604 3496380 - 3496365 - G 74 -3.2 -4.8622 | overlap 3496366 CTCGGGAATCAAAAA CGCACA GCTC TACGCG CTCCGCATGGGCGGA TERM 4605 3496415 - 3496401 - G 74 -10 -3.6422 | overlap 3496399 CATGGGCGGAAAAGA GCGTGA AAT TCACGC CATGACCGTCATACG glgB 3498656 - 3496470 - | glycogen branching enzyme TERM 4606 3498906 - 3498891 - R 100 -6.1 -5.82316 | ATTACGCAAAAAAAA GGGTG ACGATG CACCC TACATATCAATCTGA TERM 4607 3498969 - 3498982 + r 73 -9.5 -3.30124 | ATATTGCTGAATGGC GGCGC TGAC GCGCC TTATCGGGCCTACAG TERM 4608 3499077 - 3499019 - R 70 -8.8 -3.30243 | gap 1 ACGCAGGCCCGATAA GCGCTGCAATAGCCACTACGCCAACTG GCGCAG CATTCGACGCAGCGGCT-CGGCGGCGC CCCATAACAACTGGT asd 3500140 - 3499034 - | aspartate-semialdehyde dehydrogenase TERM 4609 3500501 - 3500477 - R 93 -9.9 -4.67968 | opp_overlap 3500480, overlap 3500479 3500480 TCAATAAATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 4610 3500499 - 3500479 - R 95 -12.5 -3.92799 | opp_overlap 3500480, overlap 3500477 3500480 AATAAATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 4611 3500498 - 3500480 - R 93 -16 -2.93239 | opp_overlap 3500480, overlap 3500479 3500477 ATAAATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 4612 3500480 - 3500498 + r 100 -16 -4.91109 | opp_overlap 3500479 3500477 3500480 ATAAATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 3501038 - 3500580 - | transposase for insertion sequence element IS200 TERM 4613 3501151 - 3501169 + r 100 -16 -4.18018 | opp_overlap 3501141 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 4614 3501213 - 3501188 - R 89 -6.2 -5.4251 | gap 2 TCCATAGACAAAAAA CCGGGT-A-GCG ATTA CGCCTTACCCGG CTTACGGTATCGATA gntU 3502618 - 3501278 - | low affinity gluconate transporter TERM 4615 3501961 - 3501945 - G 76 -10.9 -3.66356 | overlap 3501948 AGGCTGAAGCCGAAA GAAGGCA TTT TGCCTTC GCCCAGATGCGGCTC TERM 4616 3502169 - 3502151 - G 95 -8 -5.10461 | overlap 3502152 CCCAGGCAACAAAAA CGCCGCGG CTG CCGCCACG CCCGCAAACAGCGGA TERM 4617 3502559 - 3502526 - G 95 -15.3 -3.24188 | opp_overlap 3502535 TGAGACGACCATTAA CGCGACGAAGGCGTG CATA CGCGCCTTCATCACG AGAAACAGCAGCAGT gntK 3503148 - 3502615 - | gluconate kinase 1 gntR 3504282 - 3503287 - | gluconate utilization operon repressor TERM 4618 3503774 - 3503741 - G 75 -12.5 -2.64422 | gap 1, opp_overlap 3503747, overlap 3503731 AGATAGGCGATATGA CGATGACCACGCGCGA TAA TCGCG-GCGGTCATCT GACGGGCGGCCTCAA TERM 4619 3504391 - 3504359 - R 70 -4.8 -4.40993 | gap 1, opp_overlap 3504369 GACAAACGATGAAAA GCCGGATGGCAACGC TTTC GCGTCTT-ATCCGGC CTACAAAAGGTTACA yhhW 3505107 - 3504412 - | hypothetical protein TERM 4620 3505910 - 3505892 - H 70 -5.3 -4.50241 | gap 1, overlap 3505883 AAACAGGAATCAAAA CGCCG-AT TCTG ATACGGCG TGACGGTCAGTCCTT TERM 4621 3506545 - 3506530 - H 100 -10.4 -6.17292 | AAACCCAAAAAAAAA GCCAGC AAAA GCTGGC CAAAATAATACTGGA yhhY 3506736 - 3507224 + | putative acetyltransferase YhhY TERM 4622 3507255 - 3507226 - f 72 -5.7 -4.41348 | gap 1, overlap 3507228 CGCGCGTGAAATAAA GTTTCCCCGCCCCA CCC TGTGG-GGCGAAAC GTCACAAACCTTCAC TERM 4623 3508242 - 3508229 - g 87 -2.4 -5.60993 | opp_overlap 3508229 TCTCGCACAAAAAAA TGAC ATACCG GTCA TTATCAATCCAGCGC SPA3399 3507489 - 3508703 + | putative ribokinase SPA3400 3508719 - 3509480 + | hypothetical protein TERM 4624 3509512 - 3509485 - f 100 -5.6 -5.86976 | opp_overlap 3509489 3509506, overlap 3509488 3509489 CCAGAAAATAAAAAA CAATGGAGTAAC GAAA GTTACTCCTTTT ATAAAATATAAGGAT TERM 4625 3509509 - 3509488 - f 85 -7.3 -4.94109 | opp_overlap 3509489 3509506, overlap 3509485 3509489 GAAAATAAAAAACAA TGGAGTAAC GAAA GTTACTCCT TTTATAAAATATAAG TERM 4626 3509489 - 3509508 + F 93 -10.8 -4.41548 | opp_overlap 3509488 3509485 3509489, overlap 3509506 AAAATAAAAAACAAT GGAGTAAC GAAA GTTACTCC TTTTATAAAATATAA TERM 4627 3509508 - 3509489 - f 79 -10.8 -3.52805 | opp_overlap 3509489 3509506, overlap 3509488 3509485 AAAATAAAAAACAAT GGAGTAAC GAAA GTTACTCC TTTTATAAAATATAA SPA3401 3509534 - 3510505 + | hypothetical protein SPA3402 3510502 - 3511536 + | puative phophotriesterase TERM 4628 3511569 - 3511545 - T 86 -12.1 -3.62591 | opp_overlap 3511544 3511546, overlap 3511547 GGCATAATCTGCAAA TAGCCCGGTGT CTG ACACCGGGCCT GGTATTAAAAATCAG TERM 4629 3511546 - 3511568 + T 81 -13.4 -2.74523 | opp_overlap 3511545 3511547, overlap 3511544 GCATAATCTGCAAAT AGCCCGGTGT CTG ACACCGGGCC TGGTATTAAAAATCA TERM 4630 3511567 - 3511547 - T 100 -16.9 -3.39028 | opp_overlap 3511546 3511544, overlap 3511545 CATAATCTGCAAATA GCCCGGTGT CTG ACACCGGGC CTGGTATTAAAAATC ggt 3513323 - 3511581 - | gamma-glutamyltranspeptidase periplasmic precursor yhhA 3513449 - 3513865 + | hypothetical protein ugpQ 3514602 - 3513862 - | cytoplasmic glycerophosphodiester phosphodiesterase TERM 4631 3513958 - 3513911 - G 86 -15.1 -2.87564 | gap 3, opp_overlap 3513919, overlap 3513914 3513918 CGATCGGTGCAGATA CAATCCACGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC-T-GATTG ACGGTATACACCAGA TERM 4632 3513956 - 3513914 - G 77 -11.3 -3.58726 | gap 2, opp_overlap 3513919, overlap 3513911 3513918 TCGGTGCAGATACAA TCCACGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC-TGAT TGACGGTATACACCA TERM 4633 3513953 - 3513918 - G 83 -15.4 -2.64877 | gap 1, opp_overlap 3513919, overlap 3513914 3513911 TGCAGATACAATCCA CGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGCT GATTGACGGTATACA TERM 4634 3513919 - 3513952 + g 83 -14.5 -2.72991 | gap 1, opp_overlap 3513918 3513914 3513911 GCAGATACAATCCAC GCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC TGATTGACGGTATAC ugpC 3515669 - 3514599 - | glycerol-3-phosphate transporter ATP-binding subunit ugpE 3516517 - 3515672 - | glycerol-3-phosphate transporter membrane protein TERM 4635 3515976 - 3515960 - G 91 -10.1 -4.57073 | overlap 3515944 GATGTCGCGGAAAAA GCGCATC GGC GACGCGC CGTCAATACGGGCCG ugpA 3517401 - 3516514 - | glycerol-3-phosphate transporter permease TERM 4636 3517480 - 3517444 - R 81 -13.1 -2.71011 | opp_overlap 3517434 ATGGCGGTGCAAGCA CCTTATCCGGCCTACAA ACG CTGTAGGCCTGATAAGC GCAGCGCCACCAGGC ugpB 3518822 - 3517506 - | glycerol-3-phosphate transporter periplasmic binding protein TERM 4637 3517715 - 3517725 + g 72 -2.4 -4.93296 | overlap 3517714 GGCGAGTGGCGATAT CCGC ACC GGGG TTTTTATCGTAATAA TERM 4638 3517782 - 3517792 + g 78 -2.4 -5.16237 | GGCGGTGGTAATCGG CAGG TAG CCAG TTTTTTGATGCCATT TERM 4639 3518851 - 3518864 + r 72 -5.2 -4.66537 | opp_overlap 3518861, overlap 3518850 TTTTGTGCCGGGATG CGCG ATATCA CGCG TTTTATGTTCGCGGG TERM 4640 3518937 - 3518911 - R 70 -2.4 -5.04175 | overlap 3518914 CGAATGACAGAAAAA TAACTTTTTTAT TAC AAAAAAAAGATA GTAAGGCGACAGAGA SPA3410 3519333 - 3519055 - | hypothetical protein livF 3520210 - 3519497 - | leucine/isoleucine/valine transporter ATP-binding subunit livG 3520979 - 3520212 - | leucine/isoleucine/valine transporter ATP-binding subunit livM 3522241 - 3520976 - | leucine/isoleucine/valine transporter permease subunit livH 3523164 - 3522238 - | branched-chain amino acid transporter permease subunit LivH TERM 4641 3523202 - 3523182 - R 75 -9.6 -3.55622 | overlap 3523183 GGTAACCTTTTTAAA CCCGCCCG GCGTG CGGGCGGT GGGATAACTTATCTT TERM 4642 3523201 - 3523183 - R 81 -13.1 -2.73159 | overlap 3523182 GTAACCTTTTTAAAC CCGCCCG GCGTG CGGGCGG TGGGATAACTTATCT livK 3524333 - 3523224 - | leucine-specific binding protein TERM 4643 3523772 - 3523755 - G 79 -2.7 -5.2112 | opp_overlap 3523763, overlap 3523763 AATACCATCAAAAAA GACAATA TTGG CATTGCC CTGCTTCAGGCCATC yhhK 3524754 - 3525137 + | hypothetical protein TERM 4644 3525168 - 3525142 - g 100 -8.7 -5.72118 | gap 1 AAAAAAGATAAAAAA GCCGGAT-GGCG CTGA CGCTTATCCGGC CTACATGCCGGGAGA SPA3417 3525122 - 3525247 + | hypothetical protein TERM 4645 3525251 - 3525282 + T 73 -10.8 -3.06796 | opp_overlap 3525250 3525251 GGCAAGTTATGAAAT CCCCGGGAGCTTAC ATAA GTAAGTGACCGGGG TTGAATAACGTAGCC livJ 3526434 - 3525331 - | branched chain amino acid ABC transporter ATP-binding protein TERM 4646 3525919 - 3525954 + g 71 -6 -4.3208 | opp_overlap 3525939 3525940 CAGCCCTTCGCCGTA CTGCTGCTTATCGTGG ATAA TCGCGATGCGCTGCGG TTTTACCTTCTCCAG TERM 4647 3526051 - 3526073 + g 70 -9.8 -3.41051 | GCCGCGCGCGGTCAG CTCCGGCG CGGTCGC CGCCGGGG TTATCATCAGGATGC TERM 4648 3526635 - 3526622 - R 71 -9.5 -3.25823 | opp_overlap 3526627 GGTGGGGGAGAGGAA GGGCC CGTA GGCCC GATAAGCGAAGCGAC TERM 4649 3526734 - 3526713 - R 100 -10.9 -5.49579 | opp_overlap 3526713 CTACAAAAAACAAAA CCCCCGAAT TCAC ATTCGAGGG TTCATTGGCAATTCG TERM 4650 3526760 - 3526780 + r 76 -5.3 -4.74801 | opp_overlap 3526759, overlap 3526749 ATTCGCGAAGATTAC GCTTCGATC GCA GCGCGAAGC TTTTTCATGGCGTTC rpoH 3527610 - 3526756 - | RNA polymerase factor sigma-32 TERM 4651 3527803 - 3527839 + r 93 -14.5 -3.30903 | opp_overlap 3527796 3527780 3527799 AGAGACAACAGGGAC TCTTTCCCTGCGAACGG AAG CCCATTGCAGGGAAAGA TTATACCACGATTTT ftsX 3528911 - 3527856 - | cell division protein FtsX ftsE 3529572 - 3528904 - | cell division protein FtsE TERM 4652 3529117 - 3529143 + g 89 -13.6 -3.65046 | overlap 3529120 CGCTGGCTTATTGAC CACCGCGCGGGC GAT GCCCACGCGCTG TTGTTCGCCTCCGGA TERM 4653 3529120 - 3529140 + g 78 -13.9 -2.64045 | overlap 3529117 TGGCTTATTGACCAC CGCGCGGGC GAT GCCCACGCG CTGTTGTTCGCCTCC ftsY 3531050 - 3529575 - | cell division protein FtsY TERM 4654 3530005 - 3529979 - G 75 -6.4 -4.61231 | opp_overlap 3529982, overlap 3529980 3529982 GGATAGCGTCAAAAA TCACCGAGGCGG AGT CCGCGCCGGTAT GCTGGGCGATAACCG TERM 4655 3530004 - 3529980 - G 70 -9.9 -3.36256 | opp_overlap 3529982, overlap 3529979 3529982 GATAGCGTCAAAAAT CACCGAGGCGG AGT CCGCGCCGGTA TGCTGGGCGATAACC TERM 4656 3530002 - 3529982 - G 71 -10.3 -3.24422 | opp_overlap 3529982, overlap 3529980 3529979 TAGCGTCAAAAATCA CCGAGGCGG AGT CCGCGCCGG TATGCTGGGCGATAA yhhF 3531176 - 3531772 + | 16S rRNA m(2)G966-methyltransferase yhhL 3531759 - 3532031 + | hypothetical protein yhhM 3532424 - 3532053 - | hypothetical protein TERM 4657 3532318 - 3532334 + g 78 -6.5 -4.58283 | overlap 3532331 TTTTGCTGTAACGGC GCCGC CTCATTA GCGGC TTTTTCCCGCCGTTG TERM 4658 3532636 - 3532650 + G 73 -5.6 -4.57569 | overlap 3532627 3532632 CCTATCGCGGGCCAG CCTGGC AAC GCTGGG TTTTTAAGCCCGTCA yhhN 3532566 - 3533192 + | hypothetical protein TERM 4659 3533207 - 3533226 + F 80 -12.2 -2.95223 | opp_overlap 3533199 3533200, overlap 3533221 AATAATAGCGCTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTCCGGTTA TERM 4660 3533229 - 3533270 + F 75 -9.5 -3.48593 | opp_overlap 3533199 3533200, overlap 3533221 3533230 GTCGACTCCAGAGTG TATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGACG TTATGTCGACCCCTG TERM 4661 3533230 - 3533269 + F 71 -10.8 -2.68942 | opp_overlap 3533199 3533200, overlap 3533221 3533229 TCGACTCCAGAGTGT ATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGAC GTTATGTCGACCCCT TERM 4662 3533726 - 3533737 + G 71 -7.2 -3.96327 | opp_overlap 3533719 TTTAACCACCCGTTC GGCC AACT GGCC TTTATCGTCACCACT TERM 4663 3533879 - 3533897 + G 78 -11.8 -3.17051 | overlap 3533877 GGCGCGACGGCGGAG GCAGCAAT GGT ATTGCTGC TGTTCCTCATCGGCG TERM 4664 3534162 - 3534126 - g 74 -9.5 -3.73224 | opp_overlap 3534127 CCAGCTTTGATGAAA GCGCGCT-CACCGGCGA GTCTA TC-CCTGTGGAGCGCGC AACGGGCGACAAAGT zntA 3533273 - 3535471 + | zinc/cadmium/mercury/lead-transporting ATPase TERM 4665 3535482 - 3535501 + F 85 -12.8 -3.30007 | overlap 3535488 ACTAATCTTCTCCCA CCCGGCGG CATG TCGCCGGG TTATCCCGCGATATT TERM 4666 3535488 - 3535518 + F 84 -8.3 -4.58085 | gap 1, overlap 3535482 CTTCTCCCACCCGGC GGCATGTCGCCGGG TTAT CCCG-CGATATTCC TTTCTTTGTACATAT TERM 4667 3535926 - 3535895 - g 77 -3.6 -5.05782 | gap 1, overlap 3535896 ACGCATGTTAAAAAA TCAGCGCGATCCCGC CTC GCTGGA-CGCCATGA ACACGCTGTTAACCA TERM 4668 3536374 - 3536356 - g 70 -8.8 -3.70902 | opp_overlap 3536359, overlap 3536357 3536359 TGGCGCACATTCAAA CGATCGCC GAC GGCGATCT TACCCATGAGATAGA TERM 4669 3536373 - 3536357 - g 72 -12.3 -2.82327 | opp_overlap 3536359, overlap 3536356 3536359 GGCGCACATTCAAAC GATCGCC GAC GGCGATC TTACCCATGAGATAG tcp 3535668 - 3537311 + | methyl-accepting chemotaxis citrate transducer yhhP 3537580 - 3537335 - | cell developmental protein SirA yhhQ 3537750 - 3538415 + | hypothetical protein TERM 4670 3538588 - 3538566 - g 87 -8.3 -4.6391 | AACAACGATACAAAA GCGTCGGCA GAAAG CGCCGCCGC AGAAAGCCAGGCCTC SPA3431 3538488 - 3539045 + | hypothetical protein TERM 4671 3539063 - 3539090 + T 100 -14.1 -5.40072 | TTCACGACGATGATG CGGCCTCCGGC AGTGCA GACGGAGGCCG TTTTTTTAAGCGCCA yhhS 3540266 - 3539049 - | hypothetical protein TERM 4672 3539770 - 3539753 - G 71 -10.5 -3.18945 | overlap 3539751 CCCAGGCATAACACA GCACGCC CAGC GGCGCGC CCATCGCCATTGCGC TERM 4673 3539979 - 3539929 - G 71 -6.1 -4.2704 | gap 2, overlap 3539933 CCCAGTAGCAACAAA CTGATCATCGGCCAGGCGCTGGCGA TAT CCGCCAGCAGGTAGCCGA-G-TCCG CTTAAAAAACAGCCG TERM 4674 3541175 - 3541198 + G 72 -3.8 -4.77438 | TTTAACGGTTTTTAC GAGTGCGT ACTGGTCG GCGCGCTC TTTTTGGTGGTCCAT yhhT 3540398 - 3541447 + | hypothetical protein yhhU 3541499 - 3542077 + | holo-(acyl carrier protein) synthase 2 nikR 3542169 - 3542570 + | nickel responsive regulator yhhJ 3543796 - 3542672 - | ABC transporter ATP-binding protein yhiH 3546537 - 3543796 - | ABC transporter ATP-binding protein TERM 4675 3545641 - 3545628 - G 70 -3.1 -4.7629 | gap 1 CGAGGAAGCCAAAAA TCTCGC CGC GCG-GA ATACGGAAATTAACA TERM 4676 3546454 - 3546464 + g 81 -6.8 -4.68994 | CAGCGTGATATTGTT CAGC GCG GCTG TTTTTCCGTAATGCT yhiI 3547592 - 3546534 - | HlyD family secretion protein TERM 4677 3546605 - 3546616 + g 74 -7.2 -4.1964 | opp_overlap 3546594 GAACCCAGGCCATTC CCGG CAAA CCGG TTTTGACATATTCCA TERM 4678 3546697 - 3546712 + g 74 -6.8 -4.23758 | overlap 3546698 AGCTTCAGCCGTTCA TCGTGG GTTT CCACGG TTTTGGGTGTGAACT TERM 4679 3547246 - 3547258 + g 70 -9.1 -3.71645 | TGTTTGACGACCGAC TGCGC GGC GCGCA TTTCACTCTGGCGTT TERM 4680 3547716 - 3547705 - H 72 -3 -4.9445 | AGAAGGAATGAAAAA CAAT GGCC ATTG AGCGAGCGTTAAGGC TERM 4681 3548016 - 3548000 - H 70 -2.2 -5.00616 | GGCCCGGCTAAAAAA CATGGA TACAG CCCACG GCATCAAATATTCGT TERM 4682 3548174 - 3548158 - H 81 -5.3 -5.19879 | opp_overlap 3548150, overlap 3548150 3548159 TCTGAAATATAAAAA TTTATAA TTT TTATAAA ATTACAACCGTAAAT TERM 4683 3548264 - 3548277 + H 74 -3.9 -5.02476 | opp_overlap 3548264 TATCAAATTAGAAGA GATAA TTTT TTATC TTTTTTACCCACTCT TERM 4684 3548410 - 3548442 + G 83 -7.7 -4.67755 | TTCAAAAATGGTTGA TGGTCATTCTTCTGG CAA TCGGAGGAGGGACCA TTTTTAAATCGATGT SPA3439 3548379 - 3549671 + | hypothetical protein TERM 4685 3550274 - 3550261 - g 75 -6.7 -4.386 | opp_overlap 3550261 3550260 CAATTGCCCAGAAAA CAGGA ACAA TCCTG ATTTCTGACGAAATT SPA3440 3549687 - 3550853 + | putative aminotransferase SPA3441 3550863 - 3551243 + | putative regulatory protein TERM 4686 3551275 - 3551248 - f 81 -8.4 -4.44667 | overlap 3551249 3551250 TTCGTCAATAACAAA GGTGGTTGCCAC TGAG GTGGCAACCAGA TTAACCATGAAAAAC TERM 4687 3551274 - 3551249 - f 79 -11.9 -3.26318 | overlap 3551248 3551250 TCGTCAATAACAAAG GTGGTTGCCAC TGAG GTGGCAACCAG ATTAACCATGAAAAA TERM 4688 3551273 - 3551250 - f 90 -15.4 -2.55309 | overlap 3551249 3551248 CGTCAATAACAAAGG TGGTTGCCAC TGAG GTGGCAACCA GATTAACCATGAAAA SPA3442 3551282 - 3551929 + | putative DNA-binding protein TERM 4689 3552492 - 3552510 + G 100 -9.6 -5.10163 | TTGGTCTGCATGGCT CCAGTGCT GTC AGCATTGG TTTTATTTTACGATT TERM 4690 3552878 - 3552897 + G 74 -2.8 -4.89838 | AGCTTCTTTATTCTC GGTGCATT GATA ACTGCATC TTTTATATTTATTCC SPA3443 3551984 - 3553225 + | hypothetical protein TERM 4691 3553271 - 3553286 + T 74 -8.2 -3.95183 | opp_overlap 3553271 TACATACTACCAGAA GGCCCT GTCA GGGGCC TTATTCTGTATCTGG SPA3444 3553627 - 3553511 - | hypothetical protein yhiN 3554929 - 3553727 - | hypothetical protein TERM 4692 3554222 - 3554212 - G 77 -8.2 -4.17089 | TGGAAATCTGTAAAA CGGC GGG GCCG GACAGCCCACGATGG TERM 4693 3554639 - 3554629 - G 86 -6.8 -5.07053 | opp_overlap 3554629 3554628 AATCATCGCAAAAAA GCTG TCC CAGC GTTTTCTCATGCCAG TERM 4694 3555179 - 3555199 + G 75 -4 -4.95167 | gap 1 TACATTTGTTTGCTG GCCTGG-AT TTAC ATACCGGGC TTTTATTATTGCTTG TERM 4695 3555779 - 3555760 - g 74 -4.2 -4.68655 | overlap 3555756 3555774 3555776 GAACGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC ATTCTGGACGCGTAT TERM 4696 3555790 - 3555774 - g 74 -2.1 -5.09204 | overlap 3555760 3555756 3555776 AGACGGCAAGAAAAA GCCGCCA TTC TGGACGC GTATCGCGCTGATCC pitA 3555160 - 3556656 + | putative low-affinity inorganic phosphate transporter TERM 4697 3556695 - 3556663 - T 72 -8.4 -3.77219 | gap 1, overlap 3556664 ATTATTTAAGCCAAA TGGGCCGGA-TAGCG CTGT CGCTAATCCGGCCTG TCAGGATGAAACGAC TERM 4698 3556694 - 3556664 - T 77 -11.9 -2.8585 | gap 1, overlap 3556663 TTATTTAAGCCAAAT GGGCCGGA-TAGCG CTGT CGCTAATCCGGCCT GTCAGGATGAAACGA TERM 4699 3556786 - 3556765 - T 74 -11.5 -2.75992 | opp_overlap 3556765, overlap 3556762 GCTTATCTAATACGA GCGGGTCAG GAAA CTGGCCCGC TTTTTTTATTCAGTG TERM 4700 3556765 - 3556786 + T 100 -13.7 -5.8187 | opp_overlap 3556765 3556762 GCTTATCTAATACGA GCGGGTCAG GAAA CTGGCCCGC TTTTTTTATTCAGTG uspB 3557131 - 3556796 - | universal stress protein UspB uspA 3557519 - 3557953 + | universal stress protein A TERM 4701 3558071 - 3558054 - f 74 -8.3 -3.99374 | opp_overlap 3558054 GGCTATCAACAACAA CGCCCGC TTAT GTGGGCG TTTTGTTTATCCCCC TERM 4702 3558054 - 3558071 + F 100 -10.5 -4.99043 | opp_overlap 3558054 GGCTATCAACAACAA CGCCCGC TTAT GTGGGCG TTTTGTTTATCCCCC TERM 4703 3558376 - 3558399 + G 77 -4.4 -4.8622 | overlap 3558378 CGATTTGGCTATTAC GGCGTCCAGG GCAT CCTGGCGGTC TTTTTCGTTAAACAA TERM 4704 3558546 - 3558526 - g 76 -10.3 -3.76224 | opp_overlap 3558525 3558526 CTGTTAGGGACTAAA CGCACCCTG GTC CTGGGCGCG ATTGTGCTGGCGATT yhiP 3558283 - 3559755 + | inner membrane transporter YhiP yhiQ 3560605 - 3559847 - | putative methyltransferase TERM 4705 3560578 - 3560561 - G 74 -9.8 -3.7319 | opp_overlap 3560560 3560559 AGCCAGAACAGATAA GGCGCC GTCTGT GGCGCC CGTTTCATCCATTAA prlC 3562654 - 3560612 - | oligopeptidase A TERM 4706 3561560 - 3561571 + g 83 -7.2 -4.64861 | opp_overlap 3561560 3561559 CACCACTTCAAACAG GCCG TTCA CGGC TTTGTTTTCCGGGAA TERM 4707 3561707 - 3561721 + g 71 -4.2 -4.59773 | overlap 3561709 TTTGGCGAAGGCGCG CAGCTG GGC CAGCTC TTTTTCCCCCTGCGG SPA3452 3563470 - 3562817 - | hypothetical protein SPA3453 3563700 - 3564191 + | hypothetical protein TERM 4708 3564747 - 3564711 - g 75 -5.7 -4.59773 | overlap 3564717 GCGGAGTTTCAAAAA GACAACCGCGCCCGCGT GGA ACGCGCTGACGGCTATC AGCAACTGAAAGCCA TERM 4709 3564844 - 3564823 - g 73 -5.1 -4.58773 | CTTATGAAATGAAAA CCGATTACC AGGC GGTAGTCAG CGGCATCAGCGAGGG yhiR 3564312 - 3565154 + | hypothetical protein TERM 4710 3565979 - 3565969 - g 71 -4.6 -4.56775 | overlap 3565971 AGCGGTGGTGAAAAA CGCC GAC GGCA GTCTGACTCTGGAAC gor 3565259 - 3566611 + | glutathione reductase TERM 4711 3566613 - 3566650 + T 74 -10.5 -3.29096 | opp_overlap 3566614, overlap 3566614 TGACCATGCGTTAAT ATCTTGTGCGCCCATCT TCGA GGGTGGGCGCACAGGCC TTCATGATTAATACG TERM 4712 3566614 - 3566649 + T 83 -14 -2.57136 | opp_overlap 3566614, overlap 3566613 GACCATGCGTTAATA TCTTGTGCGCCCATCT TCGA GGGTGGGCGCACAGGC CTTCATGATTAATAC TERM 4713 3566780 - 3566792 + T 71 -10.5 -2.70932 | GCCCTGGCTGTCCTT GCGCC ATC GGCGC TGATTGCCGACGCGG SPA3456 3566982 - 3566755 - | hypothetical protein SPA3457 3567772 - 3566921 - | putative phosphosugar-binding protein TERM 4714 3567917 - 3567893 - R 100 -11.5 -6.02546 | GGAAACCAAAAAAAA TCGGGATCC GCGATCT GGATCCCGA TTCAGCCTGCTCTTC TERM 4715 3567954 - 3567967 + r 72 -6.7 -4.36914 | opp_overlap 3567954 GTAATGCTGACATCA TACGG TAAA CCGTA TTTTATCGCCGACAA SPA3458 3568670 - 3567951 - | gntR family regulatory protein TERM 4716 3568002 - 3568013 + g 71 -5.8 -4.33819 | opp_overlap 3567987 3567998 3568002 CTGTTGCGAAACGCA GGAG AGTT CTCC TTTGTTATCAATCAT treF 3568996 - 3570645 + | trehalase TERM 4717 3570678 - 3570699 + T 88 -5.9 -5.60689 | opp_overlap 3570678 GAATCGCATCATAAA TGGCTGA CTGAATTT TCAGCCA TTTTTTATTGTCTGC SPA3460 3572247 - 3570658 - | hypothetical protein TERM 4718 3572285 - 3572263 - H 84 -8.4 -4.57073 | opp_overlap 3572266 3572276, overlap 3572266 TATCTTCCCTAAAAA GACGATCCCG CGA CGAGATCTTC GTTTTCTTTTAATTA TERM 4719 3572276 - 3572286 + H 75 -3.2 -5.19998 | opp_overlap 3572266 3572263, overlap 3572266 AAGACGATCCCGCGA CGAG ATC TTCG TTTTCTTTTAATTAT TERM 4720 3572793 - 3572820 + G 100 -12.1 -5.38249 | overlap 3572773 GCGAAACGCTTATTG CGCTGATGTTC AGCATC GGACATCAGCG TTTTTTATCATTAAT SPA3461 3572528 - 3572884 + | phage-like lysozyme yhjB 3573492 - 3572890 - | LuxR family transcriptional regulator TERM 4721 3573348 - 3573362 + g 71 -4.2 -4.64992 | overlap 3573348 3573347 TATCCAGCATGACCA GCGC ATCCGGC GCGC TTTCTATTTTTTGCC yhjD 3575096 - 3576124 + | hypothetical protein TERM 4722 3576843 - 3576869 + G 71 -10 -3.53091 | GACGATAGGTATTTT CGCGCCGCTGCT GCT GGCGCTGGCGCG TTTCGGACAGGGACT yhjE 3576475 - 3577797 + | metabolite transport protein TERM 4723 3577799 - 3577829 + T 79 -9.7 -3.68244 | gap 1, opp_overlap 3577800, overlap 3577800 3577802 ATCAGGCGTTGTAAT AG-GGCGCCGGATG GCGT CATCCGGCGCTACG TTTCACATTACTGCT TERM 4724 3577827 - 3577800 - T 75 -11.2 -3.02144 | opp_overlap 3577799 3577800 3577802 TCAGGCGTTGTAATA GGGCGCCGGATG GCGT CATCCGGCGCTA CGTTTCACATTACTG TERM 4725 3577800 - 3577828 + T 82 -13.2 -2.80464 | gap 1, opp_overlap 3577800, overlap 3577799 3577802 TCAGGCGTTGTAATA G-GGCGCCGGATG GCGT CATCCGGCGCTAC GTTTCACATTACTGC TERM 4726 3577802 - 3577825 + T 100 -18.2 -2.66326 | opp_overlap 3577800, overlap 3577800 3577799 AGGCGTTGTAATAGG GCGCCGGATG GCGT CATCCGGCGC TACGTTTCACATTAC TERM 4727 3577968 - 3577998 + T 93 -10.3 -4.70659 | opp_overlap 3577933 3577971 CCGCGCCGCGCGCAA TCAGCGGCCGGGC TTGAC GCCCGCCTGCGGA TTTTTAAATGTCCCA yhjH 3580772 - 3580005 - | EAL domain-containing protein TERM 4728 3581073 - 3581055 - g 73 -8.8 -3.86015 | opp_overlap 3581057 3581061, overlap 3581056 GAGCTGTCGCAGAAA GGCGCTGA TGT TCAGCGCG GCTTCGGCGGCGACA TERM 4729 3581072 - 3581056 - g 75 -12.3 -2.91395 | opp_overlap 3581057 3581061, overlap 3581055 AGCTGTCGCAGAAAG GCGCTGA TGT TCAGCGC GGCTTCGGCGGCGAC kdgK 3581001 - 3581930 + | 2-dehydro-3-deoxygluconokinase TERM 4730 3581954 - 3581983 + T 74 -10.7 -3.25823 | gap 1, overlap 3581969 CTCTTGCCCGGTGGC GCTG-CGCTTACCG GGC CGGCAGGCGGCAGC TTACTGTGCCGCCGG yhjJ 3583471 - 3581984 - | putative zinc-protease precursor TERM 4731 3583526 - 3583506 - R 78 -5.3 -5.06414 | TCCTGGTAATAAAAA GACAGCCCC GGC AGGGATGCC TGAATATGACGTAAA TERM 4732 3583678 - 3583649 - R 75 -10 -3.59315 | overlap 3583651 TCAATTATGCGCAAA CACCCGCAGTCC TGGAAG GGACTACGGGCA TAAGTGGCGAGAGTA TERM 4733 3583676 - 3583651 - R 85 -12.6 -3.37259 | overlap 3583649 AATTATGCGCAAACA CCCGCAGTCC TGGAAG GGACTACGGG CATAAGTGGCGAGAG dctA 3584977 - 3583670 - | C4-dicarboxylate transporter DctA TERM 4734 3585113 - 3585130 + r 79 -2.6 -5.28315 | overlap 3585112 3585115 AAAAAGTTTGAGCTG GCTCGC ACAAGC GCGACC TTTTTTAACTTTTGT yhjK 3587108 - 3585135 - | putative phosphodiesterase TERM 4735 3586404 - 3586426 + g 86 -12 -3.79519 | opp_overlap 3586403 3586404 GGGCAGCTCGGAAAC CGGAAAACGC ATC GCGTTGTCCG TTTGCTCCTCGCGTT TERM 4736 3586426 - 3586404 - G 72 -12 -2.73124 | opp_overlap 3586404, overlap 3586403 GGGCAGCTCGGAAAC CGGAAAACGC ATC GCGTTGTCCG TTTGCTCCTCGCGTT TERM 4737 3587115 - 3587075 - G 81 -2 -5.28983 | gap 1, overlap 3587081 3587084 TGCAAAAGACAAAAA CAAACACCATGACAACGGC CGCA ACCATTGCCATC-TGTTTA ATTGTTAACGAGCGG yhjL 3590857 - 3587315 - | cellulose synthase subunit BcsC TERM 4738 3588931 - 3588915 - G 71 -10.8 -3.30338 | opp_overlap 3588915 3588914 AGAACGGCGTCATAA GCGGCG CGGGC CGCCGC ATTATCGCCACGCTG TERM 4739 3590127 - 3590173 + g 77 -8.1 -4.07568 | gap 2 TTTATCTGCTGGTAC CAGATGGCGGAGGCCGCGCTGCG TCC CGTA-C-TGGATTTCGCCATCTG TTTTAGCACCGCGAA yhjM 3591948 - 3590839 - | endo-1,4-D-glucanase TERM 4740 3591100 - 3591112 + g 81 -6.9 -4.81083 | opp_overlap 3591089 GACATCCACTTTCTC CGGTG GAA CGCCG TTTTTCATCGTTAAC TERM 4741 3591431 - 3591443 + g 80 -9.1 -4.09685 | CGCCAGCTATTCGCC TCGGC AAA GCCGA TTTTGCCAGGTAGCA yhjN 3594252 - 3591952 - | cellulose synthase regulator protein TERM 4742 3595613 - 3595602 - R 74 -5.8 -4.65933 | opp_overlap 3595601 GATCCGCAAAAGAAA GTGG CGTC CCAC ATATCGTTACCATCC TERM 4743 3595734 - 3595716 - R 76 -7.4 -4.30719 | TCCGGGGAGAAGAAA TGATGCGG CGT CTGCATCA TCGCCAGCTGTTTTT TERM 4744 3596807 - 3596795 - R 79 -10.5 -3.53224 | opp_overlap 3596787 GAGCGCTGCGCTAAA CGGCG ACG CGCCG TGGCGGCGGTAACCC yhjQ 3597636 - 3596884 - | cell division protein yhjR 3597840 - 3597637 - | hypothetical protein TERM 4745 3598372 - 3598355 - g 72 -2.6 -4.87665 | CCGGATTCAGAAAAA GGGCTA TACTCT TTGCCC CACGATTTGCTTTGT TERM 4746 3598672 - 3598661 - g 91 -7.2 -4.8622 | overlap 3598662 3598663 TGGTGTAACGAAAAA GGCG TCAG CGCC CGACAGCAGTTATTG TERM 4747 3599353 - 3599371 + G 76 -3.1 -5.09245 | gap 1, opp_overlap 3599331, overlap 3599347 TATTATGACCATCGG CGGCAACC GTCT GGT-GCTG TTTTTATCATTTTGC yhjS 3598085 - 3599656 + | hypothetical protein yhjT 3599653 - 3599844 + | hypothetical protein TERM 4748 3600906 - 3600857 - g 88 -11.3 -4.10007 | opp_overlap 3600857 3600858, overlap 3600858 AGAAGTTCGCGAAAA CGGCGGTATGCAGAGCGAACTGA TGAA CCAGTCCGGCCTGCCAACCGCCC TTCTGTCATTCGACG TERM 4749 3600905 - 3600858 - g 91 -14.8 -3.05522 | opp_overlap 3600857 3600858, overlap 3600857 GAAGTTCGCGAAAAC GGCGGTATGCAGAGCGAACTGA TGAA CCAGTCCGGCCTGCCAACCGCC CTTCTGTCATTCGAC yhjU 3599841 - 3601520 + | hypothetical protein TERM 4750 3601561 - 3601522 - T 100 -18.6 -3.73775 | opp_overlap 3601530 3601547, overlap 3601530 CTTACCCGCAGTAAA CCGAAAAAGGCCGCAAGG TTTC CCCTGCGGCCTGGTTCGG GCGCATGTTGCCATT TERM 4751 3601553 - 3601530 - T 100 -16 -4.82855 | opp_overlap 3601530 3601547, overlap 3601522 CAGTAAACCGAAAAA GGCCGCAAGG TTTC CCCTGCGGCC TGGTTCGGGCGCATG TERM 4752 3601530 - 3601553 + T 83 -13.8 -2.71144 | opp_overlap 3601522 3601530, overlap 3601547 CAGTAAACCGAAAAA GGCCGCAAGG TTTC CCCTGCGGCC TGGTTCGGGCGCATG SPA3481 3601733 - 3601602 - | hypothetical protein TERM 4753 3601774 - 3601816 + H 100 -12.7 -4.60797 | gap 1, opp_overlap 3601773 TGAGGTTCAAGTTAG CCCCCGTCAGGTTGCCAGGT TTAT ACCAGTCAACGTG-CGGGGG TTTTCTCTATCCAGC TERM 4754 3602288 - 3602322 + H 71 -7.2 -4.07568 | opp_overlap 3602276 3602281 GCACTATAGCCTGGT TATAGGCAGCATTCTT TAT GAGAGAGCTGCGTATA TTTTGGGCAGGGGGC TERM 4755 3602747 - 3602765 + G 75 -11 -3.37755 | opp_overlap 3602746 3602745, overlap 3602745 CCTATATCAAAACCT TCGGCCTT ACT GAGGCCGA TCTTTCGCAGTCTAT yhjV 3602341 - 3603639 + | putative amino acid permease dppF 3604962 - 3603949 - | dipeptide transporter ATP-binding subunit dppD 3605942 - 3604959 - | dipeptide transporter ATP-binding subunit TERM 4756 3605552 - 3605566 + g 74 -2.8 -4.89477 | overlap 3605549 TCAACAGGTCAATCG CTCG CTGACGA CGAG TTTTCTTGTTCCCGC dppC 3606855 - 3605953 - | dipeptide transporter TERM 4757 3606153 - 3606142 - G 74 -7.2 -4.1822 | GCCCATGCCAAGAAA GCCG AGGG CGGC CATATCGAGAATGGC TERM 4758 3606373 - 3606349 - G 71 -8.5 -3.87815 | CGGCAGCGCCACAAA CGTCAACGCCA GCG CAGCGTTGCCG ATGGAGGGGCCGAAG dppB 3607884 - 3606865 - | dipeptide transporter permease DppB TERM 4759 3608022 - 3608034 + r 80 -6.9 -4.56133 | GCCTACACAACACCG GGGCG CAG CGCTC TTTTAATTATTCGAC dppA 3609648 - 3608041 - | periplasmic dipeptide transport protein precursor TERM 4760 3608794 - 3608806 + g 90 -6.3 -5.23765 | overlap 3608787 CAGACCGGCCTGCTC CATCA GGT TGATG TTTTTATCTTCTTTC TERM 4761 3609256 - 3609268 + g 74 -3.3 -4.84359 | AGACACTTTATGGTA CGGGT TCT GCTCG TTTTTCTGCCGGTCA TERM 4762 3609420 - 3609443 + g 84 -8.8 -4.27316 | opp_overlap 3609417 3609419 ACTTCTCAGCAAGAC CCGGGATCAC TTCC GTGGTGCCGG TTTTGAATTCAACCA TERM 4763 3610190 - 3610170 - R 95 -12.6 -4.00411 | CAAAATTGTAAATAA GTAGGCCG TCGTG CGGCCTAC CGCGATCACAAAAAC SPA3488 3611530 - 3610205 - | putative xanthine permease TERM 4764 3610833 - 3610822 - G 83 -5.8 -4.84527 | CGGAGAGATCAAAAA TCGG CCAG CCGA ACGGCAAAAGCTGTG TERM 4765 3611584 - 3611559 - R 100 -11.1 -5.69023 | opp_overlap 3611558 3611557 3611560, overlap 3611562 AAAACATCAAAAAAA TAACCGCCAGC GCGG GCTGGCGGTCT GCATTATTTCAACCA TERM 4766 3611560 - 3611583 + r 78 -12.4 -2.71101 | opp_overlap 3611559 3611562, overlap 3611558 3611557 AAACATCAAAAAAAT AACCGCCAGC GCGG GCTGGCGGTC TGCATTATTTCAACC TERM 4767 3611581 - 3611562 - R 100 -15 -4.86226 | opp_overlap 3611560 3611558 3611557, overlap 3611559 ACATCAAAAAAATAA CCGCCAGC GCGG GCTGGCGG TCTGCATTATTTCAA SPA3489 3612712 - 3611588 - | hypothetical protein TERM 4768 3612587 - 3612600 + g 71 -9.5 -3.53012 | opp_overlap 3612587 3612586 GTCCACCAGGTAAAC CCGCC CTTC GGCGG TTTGCGGCGCAAAAA TERM 4769 3613182 - 3613171 - g 75 -5.8 -4.56775 | opp_overlap 3613171 3613170 ATGGCGCTGGAAAAA CAGC ATGC GCTG ATTCTGGTGCCGCCG TERM 4770 3613628 - 3613640 + G 86 -10.5 -4.07568 | ACACCTTTGCCAGCG GCGCG GTA CGCGC TTTTCAGGAACAGGC SPA3490 3612862 - 3613869 + | LacI family transcriptional regulator TERM 4771 3613892 - 3613910 + T 74 -10.2 -3.14211 | overlap 3613909 TGACTCGCCACTGCG TGGCTCGC CCT GCGGGCCG TTGCTGACGCAACGT TERM 4772 3613909 - 3613924 + T 72 -9 -3.55368 | overlap 3613892 GCTCGCCCTGCGGGC CGTTGC TGAC GCAACG TTCTCTCGCTTCGCT TERM 4773 3614022 - 3613996 - T 100 -19.6 -4.13246 | opp_overlap 3613996 3614000, overlap 3614000 GACTTCAGATACAAA GAAACCCTGCTC ATT GAGCAGGGTTTC TGAATTTGGTCGGTG TERM 4774 3613996 - 3614022 + T 100 -19.6 -2.68279 | opp_overlap 3613996 3614000, overlap 3614000 GACTTCAGATACAAA GAAACCCTGCTC ATT GAGCAGGGTTTC TGAATTTGGTCGGTG TERM 4775 3614000 - 3614018 + T 100 -14.6 -4.03204 | opp_overlap 3613996 3614000, overlap 3613996 TCAGATACAAAGAAA CCCTGCTC ATT GAGCAGGG TTTCTGAATTTGGTC TERM 4776 3614018 - 3614000 - T 100 -14.6 -4.65722 | opp_overlap 3614000 3613996, overlap 3613996 TCAGATACAAAGAAA CCCTGCTC ATT GAGCAGGG TTTCTGAATTTGGTC yhjY 3616822 - 3616118 - | hypothetical protein TERM 4777 3616780 - 3616757 - G 78 -2.2 -5.28176 | overlap 3616760 3616771 3616775 GGTATTGATAAAAAA CGAGCAGGCC ATAA GGCACGCCAG ACAACGCAATGTCCG TERM 4778 3617301 - 3617319 + G 78 -6.6 -4.59027 | opp_overlap 3617302, overlap 3617302 TTGCGATGGAGCAAA ACGGCGAG TCT TTCGCCGA TTTTGTCTGGTCATT TERM 4779 3617302 - 3617318 + G 70 -10.1 -3.34332 | opp_overlap 3617302, overlap 3617301 TGCGATGGAGCAAAA CGGCGAG TCT TTCGCCG ATTTTGTCTGGTCAT TERM 4780 3617318 - 3617302 - g 84 -9.4 -4.2828 | opp_overlap 3617302 3617301 TGCGATGGAGCAAAA CGGCGA GTCTT TCGCCG ATTTTGTCTGGTCAT tag 3616979 - 3617560 + | 3-methyl-adenine DNA glycosylase I yiaC 3617538 - 3617978 + | hypothetical protein bisC 3620280 - 3617947 - | biotin sulfoxide reductase yiaD 3620433 - 3621083 + | putative outer membrane lipoprotein TERM 4781 3621258 - 3621280 + F 77 -6.9 -4.54727 | TAATAAGCCTGTTCC GGTTGGCGC ATGCC GCGCTTACC TTTTGATTTACGGAG TERM 4782 3621511 - 3621492 - g 82 -5.6 -5.00616 | gap 1, overlap 3621493 CGCTGCTGGAAAAAA TGCCG-GCG CTA CGCGCGGCG TCAACCATCTCGGTG yiaE 3621302 - 3622276 + | 2-hydroxyacid dehydrogenase yiaF 3623036 - 3622326 - | hypothetical protein TERM 4783 3622548 - 3622520 - G 70 -9.6 -3.34517 | gap 1, opp_overlap 3622525, overlap 3622518 ACTGCTGCGTAAAGA TCTGC-GCCGCCG GGAT CAGCGGCTGCAAA GCATCTGCCGGCACG TERM 4784 3623250 - 3623228 - H 79 -4.1 -5.252 | gap 1 CACTGCGATAAAAAA CGC-GGCAAG AAAG CTTTCCAGCG GGGGATGTAATATTT cspA 3624053 - 3624265 + | major cold shock protein TERM 4785 3624290 - 3624309 + F 100 -11.4 -6.09888 | GCTCAGAATTTTGAA TCCCTGCC TGAT GGCGGGGA TTTTTTTTATTCCAA SPA3502 3624443 - 3624982 + | hypothetical protein TERM 4786 3625016 - 3624988 - T 100 -8.9 -5.44721 | opp_overlap 3624990, overlap 3624989 ATTACGTTAAAAAAA TGCCCGATAAC ATAATGG GTTATCGGGCC TACAAAGCGCCAACA TERM 4787 3625015 - 3624989 - T 95 -12.4 -3.85748 | opp_overlap 3624990, overlap 3624988 TTACGTTAAAAAAAT GCCCGATAAC ATAATGG GTTATCGGGC CTACAAAGCGCCAAC SPA3503 3625841 - 3625356 - | putative acetyltransferase SPA3504 3626116 - 3625829 - | hypothetical protein yafP 3626761 - 3626294 - | putative acetyltransferase TERM 4788 3627676 - 3627703 + r 77 -7.1 -4.46112 | opp_overlap 3627682, overlap 3627682 GCTCTTTACGTTATA AAAAAACCTGC CCGAAA GCAGGTTTTTA TTTATTTAACTGAAC TERM 4789 3627682 - 3627697 + r 91 -6.1 -5.5454 | opp_overlap 3627682, overlap 3627676 TACGTTATAAAAAAA CCTGC CCGAAA GCAGG TTTTTATTTATTTAA TERM 4790 3627697 - 3627682 - R 91 -6.8 -5.626 | opp_overlap 3627676 3627682 TACGTTATAAAAAAA CCTGCC CGAA AGCAGG TTTTTATTTATTTAA glyS 3629790 - 3627721 - | glycyl-tRNA synthetase subunit beta TERM 4791 3629231 - 3629221 - G 71 -8.2 -3.91897 | CGGCTCACCCATAAA GCGG TGG CCGC GAATGACGCGGTCAG glyQ 3630711 - 3629800 - | glycyl-tRNA synthetase subunit alpha TERM 4792 3630006 - 3630024 + g 70 -6.7 -4.12254 | gap 1 GCAGCGGGTTTTCCA GCGCCAGC AGCT GCTGG-GC TTCTTTCTCATACTG TERM 4793 3630898 - 3630874 - R 82 -7.1 -4.7889 | AGAAAGATGTAAAAA CTGCCCATCTG CAT CAAAAGAGCAG ACAAAACTCTCTTTA SPA3508 3631152 - 3630850 - | putative lipoprotein TERM 4794 3631525 - 3631541 + G 80 -4.4 -5.1287 | gap 1, overlap 3631523 TTTTTTGGCGAGCGC TG-CGCG CAAC CGCGGCA TTTTTTACGTATCGC yiaH 3631318 - 3632313 + | putative inner membrane protein TERM 4795 3632338 - 3632321 - T 75 -9.9 -3.61609 | opp_overlap 3632321, overlap 3632315 TTAGCTAAACGACAA TGATGGC TCCG GCCATCA TTCATCATCACTGTA TERM 4796 3632321 - 3632338 + T 71 -9.9 -3.22774 | opp_overlap 3632321 3632315 TTAGCTAAACGACAA TGATGGC TCCG GCCATCA TTCATCATCACTGTA yiaB 3632689 - 3632336 - | hypothetical protein TERM 4797 3632856 - 3632831 - R 88 -12.7 -3.61922 | opp_overlap 3632831 AATATTTACGGTAAA TGCCTTTCAGC CAAA ACTGAAAGGCA TTCTGACTTATGACA TERM 4798 3632831 - 3632856 + r 82 -12 -3.45054 | opp_overlap 3632831 AATATTTACGGTAAA TGCCTTTCAG CCAAAA CTGAAAGGCA TTCTGACTTATGACA xylB 3634318 - 3632864 - | xylulose kinase TERM 4799 3633538 - 3633524 - G 82 -11.4 -3.91897 | CGGTTTACTCAGAAA GCCGTC GCT GACGGC AAAATAGACGCCCGA xylA 3635695 - 3634418 - | xylose isomerase xylR 3636058 - 3637236 + | xylose operon regulatory protein bax 3638121 - 3637297 - | hypothetical protein TERM 4800 3638922 - 3638912 - g 74 -3.2 -4.87318 | overlap 3638916 TCCAAAACGGAAAAA TCAC GCT GCGA CCTGCCGACAGCCAC malS 3638437 - 3640464 + | periplasmic alpha-amylase precursor TERM 4801 3640828 - 3640816 - g 80 -10.5 -3.91858 | opp_overlap 3640820 CAGATATGGTAGAAA GCGGC AAA GCCGC TGATGCGCTTTGTAA avtA 3640638 - 3641888 + | valine--pyruvate transaminase ysaA 3642398 - 3641925 - | putative electron-transport protein yiaJ 3643315 - 3642515 - | putative transcriptional regulator TERM 4802 3644515 - 3644486 - g 75 -11.5 -3.40522 | gap 1 ACTGCTGGATGACAA CCGCCGTC-ACGGT ATC ACCGTTGACGACAG CGTCTGGGCTAAAAT yiaK 3643545 - 3644543 + | 2,3-diketo-L-gulonate reductase yiaL 3644555 - 3645019 + | hypothetical protein TERM 4803 3645164 - 3645176 + F 76 -9.1 -3.67052 | CTCCGGATATCCGGG GGCTG GAG CAGCC TTGTCTTGAACATCT TERM 4804 3645196 - 3645213 + F 72 -9.1 -3.62597 | opp_overlap 3645189 CTTGAACATCTTCAC CCGCTCG GCGA CGAGTGG TTATTGCGCCATACA TERM 4805 3645276 - 3645296 + F 72 -6.1 -4.2803 | overlap 3645277 AATGGAAACCATGCG TCGCCGT AGCGAAA ACGGCGG TTTTGGATTAGCGTC yiaM 3646114 - 3646587 + | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM TERM 4806 3647312 - 3647324 + G 86 -10.5 -4.11773 | GCCAACGGAGGCAGG GGCGG TTG CCGCC TTTTACGCCCTCTTT yiaN 3646590 - 3647867 + | hypothetical protein yiaO 3647879 - 3648865 + | putative dicarboxylate-binding periplasmic protein TERM 4807 3649315 - 3649363 + G 91 -17 -2.71144 | opp_overlap 3649328, overlap 3649328 GAATGAGCCGCAGCG CTACGCGCAGATAGGCA-GCGTCA TGA TGACGCATGACTATCTGCGC-TGG TGCTTAACCGGCGTG TERM 4808 3649846 - 3649877 + G 100 -2.9 -5.94713 | gap 1, opp_overlap 3649843 3649841 3649840 3649836 3649865 CGAGATCAATCAGGC GGTCGCCAGCCTGT CGAAA GCCGG-TAGCGACC TTTTTTTTCTGCCGT lyxK 3648869 - 3650335 + | putative L-xylulose kinase sgbH 3650332 - 3650994 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 4809 3651330 - 3651284 - g 76 -10.1 -3.83102 | gap 1, overlap 3651276 GAAATCATGACCAAA GCCATCCGTCTGGCGCGCGATC TGGG GATC-CGCACCATCCAGCTGGC GGGTTACGACGTCTA yiaR 3650987 - 3651847 + | putative L-xylulose 5-phosphate 3-epimerase sgbE 3651841 - 3652536 + | L-ribulose-5-phosphate 4-epimerase SPA3529 3653512 - 3652697 - | putative transcriptional regulator TERM 4810 3653104 - 3653129 + g 71 -6 -4.33105 | opp_overlap 3653105, overlap 3653105 3653107 TCAGCAGCACGATGA ACTCCAGCGC CGGGCT GCGCTGGTGC TTTTCCTGCTCGTTC TERM 4811 3653173 - 3653161 - G 75 -6.2 -4.60924 | overlap 3653162 TAAACTGGCGAAAAA GCGC AATCA GCGC CTGCGGATCGGCAAC TERM 4812 3653215 - 3653245 + g 74 -10.3 -3.60296 | opp_overlap 3653214 3653212 3653215 GCGGCACGGAAAGAT GCGTCAGCCAGCG CGGGT CGCTGTCCGGCGC TTTGACCTCAAAATG SPA3530 3653776 - 3655731 + | hypothetical protein aldB 3657555 - 3656017 - | aldehyde dehydrogenase B SPA3532 3657724 - 3658605 + | putative sugar kinase TERM 4813 3658826 - 3658806 - T 89 -4.7 -5.69262 | opp_overlap 3658811, overlap 3658810 3658811 TCAGAAAAATAAAAA GCAACGCAA TAA TTGTATTGC TTCATTTCTGATTTA selB 3660703 - 3658853 - | selenocysteinyl-tRNA-specific translation factor TERM 4814 3659056 - 3659077 + g 74 -7.3 -4.13945 | CGAAAGCGACAATCC GATCGTTAC GATA GTACCGATC TTTTACGATCGCGGT selA 3662091 - 3660700 - | selenocysteine synthase TERM 4815 3661116 - 3661128 + g 74 -10.5 -3.54543 | GCGTCATTTTATCCG CGCGC AGA GCGCG TTTCAGCGGATGGCT yibF 3662798 - 3662190 - | glutathione S-transferase TERM 4816 3663012 - 3662997 - H 86 -4 -5.50723 | GCACCAAAATAAAAA TGTGAA ATAT CTCACA TAAAATGGCCTTTTA mtlA 3663274 - 3665190 + | mannitol-specific enzyme II of phosphotransferase system TERM 4817 3666478 - 3666467 - g 86 -7.2 -4.68593 | overlap 3666468 CTGATTACCGAAAAA GGCC CGCA GGCC GCGCTGGCGCAAATT mtlD 3665411 - 3666559 + | mannitol-1-phosphate 5-dehydrogenase TERM 4818 3666592 - 3666567 - T 79 -11.1 -3.41053 | overlap 3666560 CCAAATGACGCAGAA TCCGGCGCAGG TTAG CCTGCGCCCAA ATAACAGATTGTCAG SPA3540 3667364 - 3667155 - | hypothetical protein yibL 3667655 - 3668017 + | hypothetical protein TERM 4819 3668992 - 3668963 - g 81 -3.5 -5.14563 | gap 1, overlap 3668964 TGGGGTACGAAAAAA CCTTCCGAGGCAAA AGA TCTGCCTCGCT-GG CGACAACTCCTGCTC TERM 4820 3669087 - 3669077 - g 83 -8.2 -4.43012 | ACGCTAACATTAAAA GGCG TAT CGCC CAATAATCTTAAGTA SPA3542 3668504 - 3669187 + | putative lipoprotein TERM 4821 3670394 - 3670363 - f 79 -7.4 -4.46615 | overlap 3670342 3670365 CAGCATCAACCAAAA CACTGCCGATATTA CCGC TAATACCGACAGCA TTAACCAGAACACAA TERM 4822 3670392 - 3670365 - f 79 -10 -3.83437 | overlap 3670342 3670363 GCATCAACCAAAACA CTGCCGATATTA CCGC TAATACCGACAG CATTAACCAGAACAC TERM 4823 3670751 - 3670720 - f 79 -7.4 -4.46615 | overlap 3670699 3670722 CAGCATCAACCAAAA CACTGCCGATATTA CCGC TAATACCGACAGCA TTAACCAGAACACAA TERM 4824 3670749 - 3670722 - f 79 -10 -3.83437 | overlap 3670699 3670720 GCATCAACCAAAACA CTGCCGATATTA CCGC TAATACCGACAG CATTAACCAGAACAC TERM 4825 3673586 - 3673608 + F 100 -16.4 -4.30448 | opp_overlap 3673586 ACTCCCGACATCAAA GGCAATGGCA TAA TGCCATTGCC TTTTCACTTCCCTTT TERM 4826 3673608 - 3673586 - f 100 -16.4 -3.83205 | opp_overlap 3673586 ACTCCCGACATCAAA GGCAATGGCA TAA TGCCATTGCC TTTTCACTTCCCTTT TERM 4827 3674375 - 3674348 - g 74 -10.6 -3.59979 | opp_overlap 3674374 GTGCCTGATTGTAAA CACCGCGCCA GTCGCCTT TGGCGCGATG GGGATCCCGATTCTG lldP 3673857 - 3675512 + | L-lactate permease lctR 3675509 - 3676285 + | DNA-binding transcriptional repressor LldR lldD 3676282 - 3677472 + | L-lactate dehydrogenase yibK 3677537 - 3678010 + | putative tRNA/rRNA methyltransferase YibK SPA3548 3679133 - 3678078 - | LacI family transcriptional regulator TERM 4828 3678559 - 3678572 + g 72 -3.8 -4.72272 | AGAAGATACTCCCCC GTCG CCTGCC CGAC TTTTTCATGGGAAAA SPA3549 3679401 - 3680597 + | putative racemase TERM 4829 3680605 - 3680623 + F 79 -11.7 -3.1352 | overlap 3680601 GCCCTTAACCCGACT GGCGGGA ATCCG TCCCGCC TCTCTTACCTTACAG TERM 4830 3680703 - 3680688 - g 71 -4.6 -4.57503 | overlap 3680689 GAACACAATAATAAA GCGCAC AAAA GTGCGT CATACCATTCTTATA SPA3550 3680671 - 3681981 + | hypothetical protein TERM 4831 3682008 - 3682041 + T 100 -8.3 -5.32944 | gap 2 GCGAATTCTTCGCTC CGCTGTTCCG--GGA TTGCAC TCCATCGGAACAGCG TTTTTTAGTTGTACC cysE 3682885 - 3682064 - | serine acetyltransferase TERM 4832 3682910 - 3682939 + r 84 -10.8 -3.86194 | gap 1, opp_overlap 3682910 3682913 CAGACGGGCAGAAAA CGA-CCAACCCGT TCTGT GCGGGTTGGGTCG TTTATGCAAACAGTT TERM 4833 3682939 - 3682910 - R 90 -10.1 -4.39426 | gap 1, opp_overlap 3682910, overlap 3682913 CAGACGGGCAGAAAA CGA-CCAACCCG TTCTGTG CGGGTTGGGTCG TTTATGCAAACAGTT TERM 4834 3682935 - 3682913 - R 74 -10.6 -3.17598 | opp_overlap 3682910, overlap 3682910 ACGGGCAGAAAACGA CCAACCCG TTCTGTG CGGGTTGG GTCGTTTATGCAAAC gpsA 3683982 - 3682963 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 4835 3683274 - 3683249 - G 71 -9.7 -3.56821 | gap 1, opp_overlap 3683267 3683268, overlap 3683266 3683267 ACCAGATCGCCTAAA CCCGCCATCCCC ATA AAGG-TGGCGGG ATCGGCGCCAAGCGC TERM 4836 3683980 - 3683996 + g 76 -10.9 -3.69283 | overlap 3683991 CGCATTACTTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 3684449 - 3683982 - | preprotein translocase subunit SecB grxC 3684744 - 3684493 - | glutaredoxin 3 yibN 3685261 - 3684830 - | putative secreted protein TERM 4837 3685001 - 3685015 + g 83 -10 -4.08485 | GTGCTTTTCCAGTTC GCCAAC ATT GTTGGC TTTGATTTCGCTCGG TERM 4838 3686027 - 3686054 + G 71 -11.2 -2.95476 | gap 1, opp_overlap 3686015 3686025 3686026 3686044, overlap 3686044 ATTCGAAGACAAATT CGCCGCGCTGGGC AAA GGCC-GCGTGGCG TCTATCGTCGGTCGT pmgI 3685509 - 3687053 + | phosphoglyceromutase TERM 4839 3687135 - 3687161 + G 100 -14.5 -3.81022 | overlap 3687156 GTCAGGCCTTTGTTC TACGCCAGCGT ACTTA GCGCTGGCGTA TTGTTGTGCGCCTTT TERM 4840 3688261 - 3688284 + G 73 -5.9 -4.43877 | opp_overlap 3688239 CCCTTGTGGGCAGTA GCGGCGGTC AGGGTA GACCCTCGC TTTATTTCGAAATTC yibP 3687063 - 3688346 + | hypothetical protein TERM 4841 3688482 - 3688472 - g 74 -6.8 -4.2349 | overlap 3688475 CCCGCACACGGAAAA CCAG GTT CTGG CGCTGCCGCCAAACA TERM 4842 3689178 - 3689166 - g 76 -3.3 -5.09426 | TGCAAGCCGAAAAAA CCGCT GCA ACCGG TCTACGCTACGCGCT yigQ 3688350 - 3689312 + | hypothetical protein yibD 3690333 - 3689299 - | glycosyl transferase TERM 4843 3690078 - 3690064 - G 71 -7.8 -3.92075 | ATCCGCATCGACAAA GGCGAC GTA ATCGCC GGTCGCCGCTTGCAG TERM 4844 3690551 - 3690571 + r 89 -11.2 -4.13767 | opp_overlap 3690551 TTCCCTAACAAAAAA GGTTGGTG AATGA CACCAACC TTTTACGATGAAACG TERM 4845 3690571 - 3690551 - R 100 -11.2 -5.4505 | opp_overlap 3690551 TTCCCTAACAAAAAA GGTTGGTG AATGA CACCAACC TTTTACGATGAAACG TERM 4846 3690616 - 3690594 - R 78 -12.8 -2.68799 | opp_overlap 3690594 3690596 3690612, overlap 3690586 3690585 3690596 ATGAAACGTATATCA GACCCGATAA ATA TCATCGGGTC TCTATACCCTTCATA TERM 4847 3690594 - 3690616 + r 72 -10.6 -2.92157 | opp_overlap 3690594 3690586 3690585 3690596, overlap 3690596 3690612 ATGAAACGTATATCA GACCCGATAA ATA TCATCGGGTC TCTATACCCTTCATA TERM 4848 3690713 - 3690735 + r 73 -11.4 -2.71144 | opp_overlap 3690709 3690717, overlap 3690717 GTCGCAAGCGACGTT CAAATCTGCT CCC GGCAGATTTG TCGTTCACCCCAGTC tdh 3691853 - 3690828 - | L-threonine 3-dehydrogenase TERM 4849 3691676 - 3691693 + g 76 -2.7 -5.00884 | ATTCATGCCCCACGA CCATC GGAACCGG GATGG TTTTTTGCGACCAGT kbl 3693059 - 3691863 - | 2-amino-3-ketobutyrate coenzyme A ligase rfaD 3693262 - 3694194 + | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 4850 3694295 - 3694328 + G 84 -12.5 -3.34962 | gap 1, opp_overlap 3694294 3694298, overlap 3694298 TCCCCAGGCGATAAT CGACGTGATGGCGCCA GCC TGGTGCCGTC-CGTTG TTATCGCGTATGCCG TERM 4851 3694298 - 3694325 + G 80 -10.6 -3.81447 | gap 1, opp_overlap 3694298 3694294, overlap 3694295 CCAGGCGATAATCGA CGTGATGGCGCCA GCC TGGTGCCGTC-CG TTGTTATCGCGTATG TERM 4852 3694686 - 3694726 + G 95 -14.2 -3.3197 | opp_overlap 3694698, overlap 3694690 3694698 CAGCTCCAGGTTAGC GAGGGTGAAAAATCGCTG ATGTG CAGCGATTTTTCGCTATC TTCTGAACGTCCTCT TERM 4853 3694690 - 3694722 + G 100 -15.8 -3.17622 | opp_overlap 3694698, overlap 3694686 3694698 TCCAGGTTAGCGAGG GTGAAAAATCGCTG ATGTG CAGCGATTTTTCGC TATCTTCTGAACGTC TERM 4854 3694698 - 3694714 + G 90 -8 -4.74453 | opp_overlap 3694698, overlap 3694690 3694686 AGCGAGGGTGAAAAA TCGCTG ATGTG CAGCGA TTTTTCGCTATCTTC TERM 4855 3694714 - 3694698 - g 87 -8 -4.60041 | opp_overlap 3694698 3694690 3694686 AGCGAGGGTGAAAAA TCGCTG ATGTG CAGCGA TTTTTCGCTATCTTC waaF 3694197 - 3695243 + | ADP-heptose:LPS heptosyltransferase II waaC 3695243 - 3696196 + | ADP-heptose:LPS heptosyl transferase I waaL 3696236 - 3697450 + | O-antigen ligase TERM 4856 3697493 - 3697446 - T 100 -18.8 -3.6761 | opp_overlap 3697455, overlap 3697455 TGGCGCTAAGAAATA GATAAAAAACGCGCTGATAC TTATTACG GTATCAGCGCGTTTTCCATC ATCAGGACTCAATCA TERM 4857 3697455 - 3697484 + T 100 -14.4 -4.21194 | opp_overlap 3697446 3697455 GAAATAGATAAAAAA CGCGCTGATACT TATTAC GGTATCAGCGCG TTTTCCATCATCAGG TERM 4858 3697484 - 3697455 - T 100 -13.7 -5.51046 | opp_overlap 3697455, overlap 3697446 GAAATAGATAAAAAA CGCGCTGATAC TTATTACG GTATCAGCGCG TTTTCCATCATCAGG waaK 3698651 - 3697506 - | lipopolysaccharide 1,2-N-acetylglucosaminetransferase TERM 4859 3698729 - 3698711 - R 78 -5.3 -5.01422 | gap 1 TTATACAAAAAGAAA TGCG-TGC CGAA GCAACGCA AAATAATGATTTATC waaZ 3699560 - 3698751 - | lipopolysaccharide core biosynthesis protein TERM 4860 3699211 - 3699183 - G 75 -6 -4.57341 | AATTTTCTTTAAAAA GCCCCCTTTTTC TCGGC GATAAAAGGAGC GAATAATTAAACAGT TERM 4861 3699336 - 3699322 - G 77 -4.2 -4.94992 | CTAAAGTTATAAAAA TCTTCG CGC CGACGA TGGAGGAAGCGAACA waaY 3700408 - 3699710 - | lipopolysaccharide core biosynthesis protein TERM 4862 3700178 - 3700205 + g 91 -3.6 -5.46698 | gap 1, opp_overlap 3700184 GTAGTAATCTCCTTT TACT-AACGATTT GAA AAAGCGTTCAGTA TTTTTTACTTTTGGA TERM 4863 3700351 - 3700382 + g 74 -2.3 -5.04265 | overlap 3700352 3700354 3700356 ATATCTCAATGTATT TTTCACCGTCTTT TTTGAC AAAGACGGTATAG TTTTTAATCTTTTTT waaJ 3701441 - 3700431 - | lipopolysaccharide 1,2-glucosyltransferase TERM 4864 3700869 - 3700851 - G 77 -4.6 -4.93365 | opp_overlap 3700851 TGCCAGAAGTAAAAA TGCCTT TTCAGTT AAGGCA TTCTCTTTCCATAGT waaI 3702472 - 3701459 - | lipopolysaccharide 1,3-galactosyltransferase waaB 3703557 - 3702478 - | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase wabA 3704551 - 3703571 - | hypothetical protein waaP 3705404 - 3704607 - | lipopolysaccharide core biosynthesis protein TERM 4865 3704711 - 3704693 - G 74 -7.4 -4.07687 | ATTCTTTTTGCAAAA TCTCTCGC AGG GGGAGAGA GAAATACTCACGCAT waaG 3706521 - 3705397 - | lipopolysaccharide core biosynthesis protein TERM 4866 3705768 - 3705755 - G 78 -2.3 -5.24129 | opp_overlap 3705766, overlap 3705756 CGTCCGGAGAAAAAA TGCAC ATTC GTGCC GACGCCGCTTCTTTC waaQ 3707552 - 3706518 - | lipopolysaccharide core biosynthesis protein TERM 4867 3706544 - 3706564 + g 76 -3.3 -5.08824 | gap 1 TGTCCAAATCTATGG TGCGTGCC TCATGC GGCA-GCA TTTTTTCCGTCGCGG kdtA 3707997 - 3709274 + | 3-deoxy-D-manno-octulosonic-acid transferase coaD 3709283 - 3709762 + | phosphopantetheine adenylyltransferase mutM 3710599 - 3709790 - | formamidopyrimidine-DNA glycosylase TERM 4868 3710679 - 3710651 - R 86 -9 -4.38712 | gap 1, opp_overlap 3710652 3710658, overlap 3710658 GGGACGGCCAGAAAA CAAAAAACCCCGC CGAA GCGAGG-TTTTTG TTACATCAAAGCGAG TERM 4869 3710673 - 3710658 - R 100 -8.2 -5.86976 | opp_overlap 3710652 3710658, overlap 3710651 CCAGAAAACAAAAAA CCCCGC CGAA GCGAGG TTTTTGTTACATCAA TERM 4870 3710658 - 3710673 + r 82 -6 -5.10461 | opp_overlap 3710658 3710651, overlap 3710652 CCAGAAAACAAAAAA CCCCGC CGAA GCGAGG TTTTTGTTACATCAA rpmG 3710864 - 3710697 - | 50S ribosomal protein L33 rpmB 3711121 - 3710885 - | 50S ribosomal protein L28 TERM 4871 3711326 - 3711313 - R 72 -6.7 -4.2074 | overlap 3711316 TCCCGAACAGACAAA GATCC CGAT GGATC GCGCAAAGAATCTTA radC 3712004 - 3711339 - | DNA repair protein RadC TERM 4872 3713118 - 3713100 - g 71 -4.5 -4.67168 | gap 1, opp_overlap 3713116, overlap 3713091 AAAAATGGTCAAAAA CCCGGACA TTGT CG-CCGGG GTGGCCGCACTCAGT dfp 3712180 - 3713400 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase dut 3713381 - 3713836 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 4873 3713869 - 3713889 + F 70 -9 -3.33492 | AACGTCATAATACTG CCGCAAGC GCTGA GTTTGCGG TTATAGCGTGGGTGC slmA 3713944 - 3714540 + | nucleoid occlusion protein pyrE 3715259 - 3714618 - | orotate phosphoribosyltransferase TERM 4874 3715128 - 3715108 - G 76 -5.3 -4.82901 | opp_overlap 3715121 GCTTCGGCATAAAAA CGGCCTAAC AAC GCCAGGTCG CGCCCGGTATTAAAC TERM 4875 3715331 - 3715314 - R 100 -11.3 -5.96219 | TACGGACAAAAAAAA GGCGACT TTTC AGTCGCC TTAAAATCAATTTTC rph 3716054 - 3715338 - | ribonuclease PH TERM 4876 3716903 - 3716885 - g 85 -2.4 -5.45652 | gap 1, overlap 3716887 ATTCTGAAGAAAAAA GA-GGCG GTAGGT CGCCGTC TGGACTTCATGATGC yicC 3716180 - 3717043 + | hypothetical protein TERM 4877 3717062 - 3717091 + T 80 -10 -3.93695 | gap 1, opp_overlap 3717059 3717068 TGGCGCTCAATATGT CAC-AGAGCCCGC CTTAT GCGGGCTCTCGCG TTTATCGGTAGTACG TERM 4878 3717084 - 3717068 - T 72 -10.8 -2.91735 | opp_overlap 3717062, overlap 3717059 TCAATATGTCACAGA GCCCGC CTTAT GCGGGC TCTCGCGTTTATCGG SPA3588 3717995 - 3717093 - | putative regulatory protein TERM 4879 3717220 - 3717182 - G 75 -3.8 -4.8667 | gap 1, overlap 3717184 3717185 GATACTGCATAAAAA TAGCGCCTTCCGCCTGC TCCCCG GCAAGCGGCAGG-ACAA AAAGACCGCGCTTAT SPA3589 3718069 - 3718953 + | putative beta-lactamase yicG 3719201 - 3719818 + | hypothetical protein ligB 3721500 - 3719815 - | NAD-dependent DNA ligase LigB TERM 4880 3720613 - 3720639 + g 74 -8.6 -3.92542 | CAGCCAGTCGCCCTG CCCGGGTCGCCA GTA TTGTGACGCGGG TTCTTTAGCCATGCG TERM 4881 3721812 - 3721824 + G 80 -9.1 -4.15044 | opp_overlap 3721808 3721812 GCGCGGGTAAATCCA GCCTG ATT CAGGC TTTATTAAAAACCCA TERM 4882 3722100 - 3722117 + G 85 -2.6 -5.45802 | opp_overlap 3722100 3722098 AAATTCGCGAAAAGA TGCCGC AAGCAC GCAGCA TTTTTATTTTGCCGC gmk 3721757 - 3722380 + | guanylate kinase TERM 4883 3722600 - 3722571 - g 72 -3.5 -4.71401 | gap 1, overlap 3722563 3722574 3722575 AAGAAAACGATAAAA CTACCGTTATCGCG CTG CGCGAAATCGA-AG AAGGTCTGATTAACA rpoZ 3722435 - 3722710 + | DNA-directed RNA polymerase subunit omega TERM 4884 3723929 - 3723951 + G 84 -9 -4.23758 | overlap 3723930 CGCATTGTCGAACTG CCCGCTGGCG CTA CGCCGGTGGA TTTTGCCTATGCAGT TERM 4885 3723930 - 3723950 + G 81 -12.5 -3.13773 | overlap 3723929 GCATTGTCGAACTGC CCGCTGGCG CTA CGCCGGTGG ATTTTGCCTATGCAG TERM 4886 3724376 - 3724348 - g 83 -7.3 -4.56775 | AGTGGTCGCGAAAAA TCTGCAGCAAGGC GAA GCCGTGGTGCCGA CCGTTGCGCAATCGA spoT 3722729 - 3724840 + | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 4887 3725405 - 3725391 - g 70 -10 -3.36273 | opp_overlap 3725391 TTGCCGGAAGATGAA CAGCAG CGC CTGCTG TTTGAGGGTGGTTAT TERM 4888 3725391 - 3725405 + G 71 -10 -3.59583 | opp_overlap 3725391 TTGCCGGAAGATGAA CAGCAG CGC CTGCTG TTTGAGGGTGGTTAT trmH 3724845 - 3725534 + | tRNA guanosine-2'-O-methyltransferase recG 3725540 - 3727621 + | ATP-dependent DNA helicase RecG gltS 3728862 - 3727657 - | glutamate permease TERM 4889 3729511 - 3729525 + G 71 -7.8 -3.9398 | TGATGCTGGCAAGCT GCACCG AGA TGGTGC TTTCTCGCATTCTAC yicE 3729090 - 3730481 + | putative purine permease TERM 4890 3730518 - 3730485 - f 78 -5.8 -4.7657 | opp_overlap 3730492, overlap 3730486 3730487 GAAAAACCGTAAAAA CCCTGCGGCGGCGA CACGAT TCGCCGCTGCTGTA ACGCTCTTTCACCAT TERM 4891 3730516 - 3730487 - f 71 -10.6 -2.64962 | opp_overlap 3730492, overlap 3730486 3730485 AAAACCGTAAAAACC CTGCGGCGGCGA CACGAT TCGCCGCTGCTG TAACGCTCTTTCACC TERM 4892 3730492 - 3730511 + F 71 -10.7 -2.63479 | opp_overlap 3730487 3730486 3730485 CGTAAAAACCCTGCG GCGGCGA CACGAT TCGCCGC TGCTGTAACGCTCTT TERM 4893 3731772 - 3731743 - g 81 -12.9 -3.02511 | opp_overlap 3731765 3731767, overlap 3731762 CCGACTGGCTGAACA GCCTGACGCTGAA AAAA TTCAGCGCCAGCC GCAATCTGGTGATTG yicH 3730602 - 3732311 + | hypothetical protein yicJ 3736126 - 3734744 - | putative transporter SPA3603 3737169 - 3736825 - | hypothetical protein TERM 4894 3737377 - 3737390 + H 78 -6.7 -4.65916 | AAGAGATTATTTACA GCGAT GATT ATCGC TTTTATTACCGTCAC TERM 4895 3738148 - 3738158 + G 78 -6.8 -4.57073 | opp_overlap 3738148 TAATCATTGGGAAGA GCTG GAA CAGC TTTTTGAAGAACATA SPA3604 3737729 - 3738325 + | hypothetical protein TERM 4896 3738418 - 3738454 + F 100 -15.3 -4.52589 | gap 1, opp_overlap 3738424 3738425, overlap 3738425 CACCTTTATTTCACC GCATAATGCGCCTGCC ACTCCC GGCAGGCGCGTT-TGC TTTTATATGGACCAA TERM 4897 3738449 - 3738424 - f 85 -12.5 -3.33162 | opp_overlap 3738418 3738425, overlap 3738425 TATTTCACCGCATAA TGCGCCTGCCA CTCC CGGCAGGCGCG TTTGCTTTTATATGG TERM 4898 3738448 - 3738425 - f 90 -16 -2.59683 | opp_overlap 3738418 3738425, overlap 3738424 ATTTCACCGCATAAT GCGCCTGCCA CTCC CGGCAGGCGC GTTTGCTTTTATATG TERM 4899 3738425 - 3738448 + F 100 -15.3 -3.17012 | opp_overlap 3738425 3738424, overlap 3738418 ATTTCACCGCATAAT GCGCCTGCC ACTCCC GGCAGGCGC GTTTGCTTTTATATG TERM 4900 3739632 - 3739602 - g 95 -11.2 -4.64676 | overlap 3739603 3739604 3739606 CGAGCTTGAAGAAAA TTCAGTTGTTCGGT TTT ACCGAACAACTGCC AGTGATGGGAAAAAT TERM 4901 3739631 - 3739603 - g 95 -14.7 -3.38324 | overlap 3739602 3739604 3739606 GAGCTTGAAGAAAAT TCAGTTGTTCGGT TTT ACCGAACAACTGC CAGTGATGGGAAAAA TERM 4902 3739630 - 3739604 - g 95 -18.2 -2.62512 | overlap 3739603 3739602 3739606 AGCTTGAAGAAAATT CAGTTGTTCGGT TTT ACCGAACAACTG CCAGTGATGGGAAAA TERM 4903 3739628 - 3739606 - g 83 -15 -2.84841 | overlap 3739604 3739603 3739602 CTTGAAGAAAATTCA GTTGTTCGGT TTT ACCGAACAAC TGCCAGTGATGGGAA rhuM 3739441 - 3740424 + | putative DNA-binding protein TERM 4904 3741022 - 3741033 + F 76 -4.4 -5.01845 | ACACTGAATAGTTTC TCAG TTAC CTGA TTTTTCATTGTTATC rmbA 3742142 - 3742750 + | hypothetical protein TERM 4905 3743497 - 3743475 - g 71 -4.8 -4.58395 | overlap 3743477 GTCACGTGCCAAAAA TACGATTGTC GTC GGCAATCGTG CACATATTGTTACTA TERM 4906 3744491 - 3744477 - g 83 -5.7 -4.84529 | opp_overlap 3744476 GCAGAAAGGTAAAAA CTGGT ATCTG ACCAG CTACATTGAGCCGGA misL 3742825 - 3745677 + | putative autotransported protein TERM 4907 3745716 - 3745690 - T 76 -9.4 -3.68569 | opp_overlap 3745694, overlap 3745692 3745694 TGATTCAGGTAACAA CAGAGCCGCTGA TCT TCAGCGGCTTTT ACCCGGAAGCGCTTT TERM 4908 3745714 - 3745692 - T 82 -12 -3.42256 | opp_overlap 3745694, overlap 3745690 3745694 ATTCAGGTAACAACA GAGCCGCTGA TCT TCAGCGGCTT TTACCCGGAAGCGCT TERM 4909 3745694 - 3745712 + T 100 -14.6 -4.07568 | opp_overlap 3745692 3745690 3745694 TCAGGTAACAACAGA GCCGCTGA TCT TCAGCGGC TTTTACCCGGAAGCG TERM 4910 3745712 - 3745694 - T 90 -14.6 -3.27902 | opp_overlap 3745694, overlap 3745692 3745690 TCAGGTAACAACAGA GCCGCTGA TCT TCAGCGGC TTTTACCCGGAAGCG TERM 4911 3745808 - 3745790 - T 76 -4.5 -4.9725 | overlap 3745792 ATGTGTACAGAAAAA TATCGGG CGTTT CCCGATG GTGAACATAAAGCCA TERM 4912 3745806 - 3745792 - T 71 -7.1 -4.11141 | overlap 3745790 GTGTACAGAAAAATA TCGGG CGTTT CCCGA TGGTGAACATAAAGC fidL 3746236 - 3745772 - | hypothetical protein TERM 4913 3745830 - 3745820 - G 70 -6.8 -4.19624 | GATGGTGAACATAAA GCCA CGA TGGC CCTGAGTCAGGATGG marT 3747104 - 3746247 - | putative transcriptional regulatory protein TERM 4914 3746430 - 3746440 + g 71 -8.2 -3.77177 | opp_overlap 3746430 CTTATAGCTTGCAAA GCGG CTA CCGC TTTCGATATCTTCAT TERM 4915 3746526 - 3746515 - G 71 -4.4 -4.62783 | TAGCGATCGTAAAAA TCCT TATC AGGA ACGGTTTGCCAGCTT slsA 3747889 - 3748569 + | hypothetical protein TERM 4916 3748592 - 3748612 + T 100 -14.1 -4.61199 | opp_overlap 3748592, overlap 3748583 CCTGAAGCGGCTAAA TAGCCCCAT TTA ATGGGGCTA TTTTATCTATCGCCT TERM 4917 3748612 - 3748592 - T 93 -14.1 -3.57561 | opp_overlap 3748583 3748592 CCTGAAGCGGCTAAA TAGCCCCAT TTA ATGGGGCTA TTTTATCTATCGCCT cigR 3749371 - 3748892 - | putative inner membrane protein mgtB 3752412 - 3749686 - | magnesium transport ATPase, P-type 2 TERM 4918 3751954 - 3751969 + g 73 -5.4 -4.57837 | opp_overlap 3751945 ACGCAACACCGTGGC GGTGGT GCGC ACCATC TTTTTCAGCGCCTGT TERM 4919 3752535 - 3752552 + r 77 -3.4 -5.18371 | AAAGGTTATTGCTTA CTCACT ATTTTG AGTGGG TTTTATTTTATCGAC mgtC 3753327 - 3752632 - | hypothetical protein TERM 4920 3753203 - 3753183 - G 100 -8.2 -5.19328 | opp_overlap 3753188, overlap 3753184 AGCTCAGAATAAAAA CGGCGGCG CCTGT CGCCACCA GCGCATTAGTGCGTA TERM 4921 3753202 - 3753184 - G 74 -9.5 -3.70512 | opp_overlap 3753188, overlap 3753183 GCTCAGAATAAAAAC GGCGGCG CCTGT CGCCACC AGCGCATTAGTGCGT TERM 4922 3753723 - 3753708 - H 85 -3.3 -5.60993 | CCCGTGACAAAAAAA TGACA ATATTA TGTCA ATAACAGGCTCGTCT yicL 3753833 - 3754735 + | hypothetical protein SPA3616 3755719 - 3754778 - | hypothetical protein TERM 4923 3755880 - 3755938 + r 75 -11 -3.03243 | opp_overlap 3755931 CATTATCGCCCGGTA GCGTAACGCTAACCGGGCCTACAAAT ACACGTC ATCTGTAGGCCAGGTAAACGTAGCGC TCTTCGGCGATAAAT SPA3617 3756698 - 3755955 - | hypothetical protein TERM 4924 3756067 - 3756082 + g 74 -10.4 -3.56092 | opp_overlap 3756047 3756046 ATGACGCGCGGCACG CCTGCC TCCA GGCAGG TTTGCAGGATAATAC TERM 4925 3756451 - 3756467 + g 71 -7.9 -3.99324 | GCCGGGTGAGTATGG GCGGCAA TCA TCGCCGC TTTGTAGTACTGCGC SPA3618 3757794 - 3756685 - | putative transferase TERM 4926 3757729 - 3757756 + g 73 -5.6 -4.56775 | gap 1, opp_overlap 3757729, overlap 3757720 TGAGACGCCCAGAAT GGTCATT-TTGCC GCA GGCGTTAATGACC TTTTTCAACCCCAGT SPA3619 3758655 - 3757798 - | putative PTS system protein TERM 4927 3758344 - 3758354 + g 87 -2.4 -5.64873 | opp_overlap 3758329, overlap 3758343 CGAGTCGTTAATCGG CTCG CCG CGCG TTTTTTGTTCTTCCA TERM 4928 3758446 - 3758475 + g 81 -3.6 -5.1861 | overlap 3758447 GTGGCGTTTTAGCGC TTCTACCTGC TCCTCTTTTT GCGGGTAGAG TTTTTTGATGATCGG SPA3620 3759404 - 3758655 - | putative PTS system protein SPA3621 3760035 - 3759550 - | putative PTS system protein TERM 4929 3759697 - 3759687 - G 87 -8.2 -4.62302 | opp_overlap 3759687 TAATATTCTGAAAAA CCGC CTT GCGG TTTGGCCCGCCGCCG SPA3622 3760471 - 3760046 - | putative PTS system protein TERM 4930 3760602 - 3760549 - R 72 -9 -3.48395 | overlap 3760551 3760552 ACCGGGCCTACAGAA CACTCCCGTTAGGCCGGATAA-GGCG TTTA CGCCGCTATCCGGCCTAACGC-ATCA TCAGAAGAGCAAAGG TERM 4931 3760601 - 3760551 - R 82 -11.9 -3.31726 | gap 1, overlap 3760549 3760552 CGGGCCTACAGAACA CTCCCGTTAGGCCGGATAA-GGCG TTTA CGCCGCTATCCGGCCTAACGCATC ATCAGAAGAGCAAAG TERM 4932 3760600 - 3760552 - R 90 -15.4 -2.58822 | gap 1, overlap 3760551 3760549 GGGCCTACAGAACAC TCCCGTTAGGCCGGATAA-GGCG TTTA CGCCGCTATCCGGCCTAACGCAT CATCAGAAGAGCAAA TERM 4933 3760682 - 3760656 - R 73 -11.5 -2.5638 | overlap 3760655 3760654 GAGGAAGAAGAAAGG TCTGGCGAGGC GCGAA GCCCCGCCAGT AAAAGGATTAGCTAT SPA3623 3763488 - 3760690 - | transcriptional regulator TERM 4934 3761045 - 3761035 - G 71 -8.2 -3.86015 | overlap 3761036 TAGCGCGCTGATAAA GCGC ATG GCGC TGCGCTCCATCTCCA TERM 4935 3761162 - 3761152 - G 75 -6.8 -4.46112 | overlap 3761159 3761160 TTCCAGCGAAATAAA CGGA ATA TCCG GCAGCCCCGGCTGGA TERM 4936 3761779 - 3761766 - G 86 -9.5 -4.26327 | overlap 3761763 GAGCGATCAAAATAA CCCCG CAGT CGGGG CTGGCATCGATGCGC TERM 4937 3762312 - 3762333 + g 71 -10.1 -3.59979 | overlap 3762299 3762298 3762296 ATGCGGGCAGCGTGC GCGCGTCTA TATT TAGCCGCGC TTTACCGTCAAACAG SPA3624 3763685 - 3763978 + | putative secreted protein TERM 4938 3765429 - 3765411 - g 84 -3 -5.42259 | GCACGGTGAAAAAAA GCGGAGAA TGG TTTGCCGC CACCGCAGAGCATAA SPA3625 3764084 - 3765457 + | putative glycosyl hydrolase nepI 3766710 - 3765517 - | ribonucleoside transporter TERM 4939 3766228 - 3766216 - G 71 -4.7 -4.59511 | AATACCGCCCAAAAA GCTGC CCA GCGGC GCGGCGATCACTAAC TERM 4940 3766890 - 3766870 - H 84 -8.3 -4.67038 | opp_overlap 3766867 3766881, overlap 3766881 CGTGCAAAACCAAAA GGTGAGACA TAG TGTATCACC TGGTGCTATACTTTA TERM 4941 3767307 - 3767287 - g 84 -9.1 -4.35327 | TCAGCAAAAACTAAA TTCAAAAGC CCT GCCTTTGAA GCGATTCATAGCGCG SPA3628 3767269 - 3767592 + | putative DNA-binding protein SPA3629 3767952 - 3767683 - | putative PTS system phosphocarrier protein gatY 3768822 - 3767962 - | putative fructose-1,6-bisphosphate aldolase TERM 4942 3768346 - 3768365 + g 86 -10.8 -4.13945 | opp_overlap 3768344 CTCCTCAACAAAGCG CTGAACCT TCTC AGGTTCAG TTTTGCAGTCAGCCT SPA3631 3770369 - 3768885 - | putative carbohydrate kinase SPA3632 3771720 - 3770362 - | putative PTS system IIC component TERM 4943 3771666 - 3771639 - G 93 -4.7 -5.52986 | ATGCCAGGAAAAAAA GGACCAGCGGC AATAAA ACCGTTGGGCC AAATCCCAGGACATA SPA3633 3772083 - 3771796 - | putative PTS system IIB component SPA3634 3772553 - 3772080 - | hypothetical protein SPA3635 3773314 - 3772571 - | GntR family transcriptional regulator yicN 3774119 - 3773667 - | hypothetical protein TERM 4944 3773804 - 3773819 + g 83 -7.5 -4.56597 | GTGTGTCGGTGATCG GCGCG GCTAAA CGCGC TTTTTGCAGCAAGCG TERM 4945 3774288 - 3774270 - R 100 -13.1 -5.31456 | overlap 3774259 3774254 GCAAGGCATAAAAAA GCCCGGC GTTAA GCCGGGC AAAACGTTACCAAAT TERM 4946 3774537 - 3774557 + r 72 -3.1 -5.08824 | opp_overlap 3774520, overlap 3774538 GAAGGTGCCCTTGAT ACCGTCCGC AGC GCCGATGGC TTTTTTCGGTACAAA TERM 4947 3776136 - 3776126 - R 71 -6.8 -4.15044 | CCGGTGGTGAAGAAA CAGG CCG CCTG CATCACGTAGCTGGC TERM 4948 3776758 - 3776704 - R 79 -11.3 -3.32844 | gap 1 CGCGGTATTCCATAA CGCCCACCAGCCGCCGCGCTCGGTAC GCGA GTACCAGGCG-GTCAGCAAACGGGCG CAAACCGGCGATCCA TERM 4949 3776800 - 3776788 - R 78 -6.2 -4.58685 | AAACCCCTGGAAAAA GGCG TTCAG CGCC TATAGCAGAGCAAAG TERM 4950 3776911 - 3776888 - R 75 -6.7 -4.38712 | CCGATGCCCATAAAA TAGCGAGCG TTAGAG CGATCGCTA ACGATGCCGGAGACA uhpA 3779275 - 3778685 - | DNA-binding transcriptional activator UhpA TERM 4951 3779405 - 3779383 - R 76 -8.5 -4.09685 | CGCCATCCGGCAAAA GCACTTACC TTAAC GATAAGTGC CTGGGTGTTCAAGCC SPA3641 3780442 - 3779429 - | hypothetical protein TERM 4952 3780457 - 3780489 + r 73 -7.6 -4.05788 | TGGTTGATCTCCTCA GGACGCGGCGACTT CAGCC AGGTTGCCGCGCAC TTTGCTTTCGCGCCA SPA3642 3781770 - 3780454 - | permease TERM 4953 3781512 - 3781526 + g 89 -2.8 -5.52384 | GGCCGATAAGTATCG CCACTT TAT AACTGG TTTTTTTAATGACCA TERM 4954 3781723 - 3781756 + g 77 -3.9 -4.99861 | gap 1, opp_overlap 3781718, overlap 3781724 3781743 3781752 CTGGAACAGAGGTGT C-TTATTCAGATACCC GTC GGGCATCTGAACGATG TTTTTATCGTTCATA TERM 4955 3781724 - 3781754 + g 74 -7.6 -4.11322 | opp_overlap 3781718, overlap 3781723 3781743 3781752 TGGAACAGAGGTGTC TTATTCAGATACCC GTC GGGCATCTGAACGA TGTTTTTATCGTTCA SPA3643 3782721 - 3781801 - | putative carbohydrate kinase TERM 4956 3781861 - 3781899 + g 81 -3.6 -5.14563 | opp_overlap 3781852 ATAAGAGGATTGGGT GCCTTTCCCGGTGACGCT GAA AGCGGCAAAGAGGACGGC TTTTTTCATGGCGGC TERM 4957 3782456 - 3782466 + g 80 -5.4 -4.88067 | GCTACGCCACTGCTG GTAC ACG GTAC TTTTTCTACATACGT TERM 4958 3782780 - 3782765 - H 70 -4.8 -4.39889 | opp_overlap 3782742 ACAATGATATTAAAA TAACAT TATC ATGTTA CTTCCGTATCATTTG TERM 4959 3783549 - 3783579 + G 74 -7.6 -4.14243 | opp_overlap 3783549 TCAATCCGCGCAAAG TGTTTATTTCCGCC AGC GGCGTACATGAACA TTTTGGCGTGAGCTG SPA3644 3783035 - 3783820 + | DeoR family transcriptional regulator ilvN 3784112 - 3783822 - | acetolactate synthase 1 regulatory subunit ilvB 3785804 - 3784116 - | acetolactate synthase catalytic subunit TERM 4960 3785885 - 3785859 - R 90 -7.2 -5.27335 | gap 1, opp_overlap 3785860, overlap 3785860 TGTCTTAAACAAAAA GCCCCGCCCGG TTTGCG CCG-GCGGGGT TTTGGAATCGTGTGT TERM 4961 3785860 - 3785884 + r 89 -11.4 -4.16279 | gap 1, opp_overlap 3785859 3785860 GTCTTAAACAAAAAG CCCCGCCCGGT TTGC GCCG-GCGGGG TTTTGGAATCGTGTG TERM 4962 3785884 - 3785860 - R 83 -10.7 -3.75678 | gap 1, opp_overlap 3785860, overlap 3785859 GTCTTAAACAAAAAG CCCCGCCCGG TTTGCG CCG-GCGGGG TTTTGGAATCGTGTG ivbL 3786009 - 3785911 - | ilvB operon leader peptide TERM 4963 3786238 - 3786223 - H 100 -10.4 -5.79595 | opp_overlap 3786223 CCGGAAAACAAAAAA CCTCGC CGAA GCGAGG TTCTTACAGCGTAAT TERM 4964 3786223 - 3786238 + H 79 -10.4 -3.62775 | opp_overlap 3786223 CCGGAAAACAAAAAA CCTCGC CGAA GCGAGG TTCTTACAGCGTAAT TERM 4965 3786323 - 3786304 - H 80 -12.2 -2.99188 | opp_overlap 3786302 3786301, overlap 3786299 3786293 3786320 3786321 AACAGCAGAAGTATA CGCGTTCT GTGC AGAACGCG CAATTTCGGCGCAAA TERM 4966 3786755 - 3786776 + H 100 -17.3 -3.69354 | opp_overlap 3786744 3786755 TCAAGCCGCACCGAA GGGGAGCGG GCAA CCGCTCCCC TTTCACCTTATCCGC TERM 4967 3786776 - 3786755 - H 100 -17.3 -3.06831 | opp_overlap 3786755, overlap 3786744 TCAAGCCGCACCGAA GGGGAGCGG GCAA CCGCTCCCC TTTCACCTTATCCGC TERM 4968 3787651 - 3787665 + G 77 -7.8 -4.3014 | TGGCGGCGGGCGGGA TTGCCC TCG GGGCGA TTTTACTCCGTCTGT SPA3648 3786825 - 3787685 + | hypothetical protein TERM 4969 3787719 - 3787738 + TF 88 -7.8 -4.92385 | overlap 3787720 AGACGTAACACATTC TCGGCAAC ATTT GTTGCCGC TTTTGTTTACATATC TERM 4970 3787720 - 3787737 + TF 82 -11.3 -3.54346 | overlap 3787719 GACGTAACACATTCT CGGCAAC ATTT GTTGCCG CTTTTGTTTACATAT TERM 4971 3788801 - 3788811 + GT 74 -2.4 -5.06414 | GGACACTACTCATCC CCGC TGC GCTG TTTTTCTTCGGCGCC SPA3650 3790045 - 3788960 - | hypothetical protein emrD 3787888 - 3789033 + | multidrug resistance protein D TERM 4972 3789043 - 3789063 + gT 100 -15.4 -3.66178 | GTTTAACATTCCCCT CGCCCGGC TTTTT GCCGGGCG TTTCACATTCCGGCG TERM 4973 3789160 - 3789178 + gT 76 -3.1 -5.0538 | overlap 3789161 GAGTGTCCGCGTTTA TCGCATA CGGAA TATGCGC TTTTTTCAGCTCGCA TERM 4974 3789221 - 3789237 + gT 72 -2.2 -4.8667 | GGCAAACGCGAACTG TGAAGC GACCG GCGTCA TTTTTATCGACTCTC TERM 4975 3789417 - 3789435 + gT 72 -8.8 -3.53343 | overlap 3789429 AAGATGTGCCACTCC GCCAGTAC ATA GTTCTGGC TTTGCGCCGGCAGTT dsdC 3791032 - 3790109 - | DNA-binding transcriptional regulator DsdC TERM 4976 3790353 - 3790336 - G 74 -11.3 -3.19936 | opp_overlap 3790335 3790334 AACGATCGAAGCCAA TGCCGGA TGAA TCCGGCA AATTTACTGCAAAAT TERM 4977 3791945 - 3791926 - g 70 -7 -4.07687 | opp_overlap 3791937 AGTGCGCGCCGAAAA CACCCTGC CATC GCTGGGCG CAACGCTGTTTACCG dsdX 3791258 - 3792595 + | permease DsdX TERM 4978 3792941 - 3792928 - g 81 -2.3 -5.40474 | ATGCTGTTAAAAAAA GACAG TCAC CTGGC AATATCTGGTTCCAT dsdA 3792613 - 3793935 + | D-serine dehydratase yidF 3794547 - 3794017 - | hypothetical protein TERM 4979 3794122 - 3794110 - G 76 -3.3 -5.1101 | GGAGTAGTTAAAAAA GGTCT GGT AGCCC TCGCAAAGCCGGTTT yidG 3794906 - 3794544 - | hypothetical protein TERM 4980 3794680 - 3794668 - G 71 -4.8 -4.57569 | TGAGTTTCGGAAAAA TCGC TATGC GCGA CATCCATCAAATTAC yidH 3795243 - 3794896 - | putative inner membrane protein TERM 4981 3795729 - 3795706 - R 72 -3.2 -5.02074 | gap 1, overlap 3795710 CCATTCCCCAAAAAA TCACCGCCA GCAGTTG TGGC-GTGA TAATACGCAGGAACA yidE 3797347 - 3795686 - | hypothetical protein TERM 4982 3796065 - 3796030 - G 80 -4.6 -4.99043 | gap 1, overlap 3796033 3796034 3796044 CCGCCAGAAACAAAA CGA-TGCCTAACTCACG CAG CGCGAGGTTGGCGCTCG GCGGCATAAACCAGT TERM 4983 3796226 - 3796252 + g 70 -2.9 -4.73388 | overlap 3796228 TCCGATGCCGATAAA CACCGGCAG CATCTGCAC CTGCTGGAG TTTTTGCTGCGCGTT TERM 4984 3797520 - 3797499 - R 100 -17.3 -5.24129 | TCGTGGCATAAAAAA GCCCCGCCA TCTC TGGCGGGGC AAGGCAAGGAGCTCA hslS 3797964 - 3797536 - | heat shock chaperone IbpB TERM 4985 3797827 - 3797846 + g 79 -2.8 -5.17054 | overlap 3797826 3797828 TAACGCTAAGGTAAT GCGATAAT GGTT ATCGTCGC TTTTTTCGATGTTAT TERM 4986 3797973 - 3797990 + r 76 -4.9 -4.74103 | gap 1 TACGCATAATCATTT CTC-CTTC TAA GAAGCGAG TTTTTACCTTCACAC TERM 4987 3798065 - 3798049 - R 74 -11.5 -2.80113 | GAGCATGGGATGACA GGCCGCG CAA CGCGACC CGACGGAATCAGTTA hslT 3798487 - 3798074 - | heat shock protein IbpA yidQ 3798794 - 3799129 + | hypothetical protein TERM 4988 3799140 - 3799169 + T 83 -10.7 -3.6707 | CCTGATTTATCGCCC GGTTTCCGTCACC CATA GCTGACGGAACCC TTTCACCTCTTCCAT yidR 3800357 - 3799131 - | putative ATP/GTP-binding protein TERM 4989 3799231 - 3799217 - G 76 -3.4 -5.0133 | opp_overlap 3799225 3799226, overlap 3799220 CATCCGGTGAAAAAA CGACGG CGT CCGCAG ACGGCGGGTTGTCGT TERM 4990 3799470 - 3799455 - G 78 -6.1 -4.72272 | GTCCCGCATCAAAAA GGCGA TCGCCG TCGCC TGCGGATTACTGCGG TERM 4991 3799572 - 3799544 - G 71 -10.9 -3.19192 | overlap 3799546 GGTGAGTGAAGGTAA GACGCCGCTGAAC TAC GCCCAACGGCGGC GATGGCATCGTTGAT TERM 4992 3799570 - 3799546 - G 76 -12.1 -3.1585 | overlap 3799544 TGAGTGAAGGTAAGA CGCCGCTGAAC TAC GCCCAACGGCG GCGATGGCATCGTTG TERM 4993 3800433 - 3800478 + r 83 -9.5 -4.11183 | gap 1, overlap 3800440 CTTTAGCGTATCGTT GGGATAGCCAGGCCCGGTGGCG CCA CGCCACCGGGCC-GTCAGGGTC TTATTTCTCCTGCGC TERM 4994 3800440 - 3800475 + r 79 -12.7 -2.78206 | gap 3, overlap 3800433 GTATCGTTGGGATAG CC--A-GGCCCGGTGGCG CCA CGCCACCGGGCCGTCAGG GTCTTATTTCTCCTG TERM 4995 3800736 - 3800746 + r 84 -8.2 -4.62069 | CCGCGTAGCCCAGCG CCGC ATC GCGG TTTTTCGGGTCCAGA ccmG 3801981 - 3801424 - | heme lyase/disulfide oxidoreductase, cytochrome c-type biogenesis ccmF 3803909 - 3801978 - | cytochrome c-type biogenesis protein F1 ccmE 3804385 - 3803906 - | cytochrome c-type biogenesis protein CcmE ccmD 3804594 - 3804382 - | heme exporter protein D1 TERM 4996 3804552 - 3804541 - G 100 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TACC CGCC CATGGCGAAAAAATC TERM 4997 3804576 - 3804566 - G 76 -3.2 -5.03314 | CCCATGGCGAAAAAA TCGC TCC ACGA TGAAAATGCCGGACT ccmC 3805328 - 3804591 - | heme exporter protein C1 TERM 4998 3804744 - 3804705 - G 83 -12.8 -3.25304 | gap 1, opp_overlap 3804712, overlap 3804695 3804706 AAAGAGCAGCAGGAA GCCGGCGATG-GCCCAGCG CAG CGGCGAGCGCATCGCCGGG TCGATACTCTGCTGC TERM 4999 3804743 - 3804706 - G 89 -16.3 -2.54459 | gap 1, opp_overlap 3804712, overlap 3804705 3804695 AAGAGCAGCAGGAAG CCGGCGATG-GCCCAGCG CAG CGGCGAGCGCATCGCCGG GTCGATACTCTGCTG ccmB 3806039 - 3805380 - | heme exporter protein B1 ccmA 3806653 - 3806036 - | cytochrome c biogenesis protein CcmA TERM 5000 3806383 - 3806366 - G 71 -4.7 -4.56597 | opp_overlap 3806379 3806381, overlap 3806368 GCCGGGGTGGAAAAA GTGCAGG TTCT CCCGCGC CGTCAGGCGGGTTTT TERM 5001 3806379 - 3806394 + g 78 -6 -4.83169 | opp_overlap 3806368 3806366, overlap 3806381 AAGTGCAGGTTCTCC CGCGCC GTCA GGCGGG TTTTTATCCCCGGCT TERM 5002 3806524 - 3806482 - G 76 -12.6 -2.78384 | gap 1, opp_overlap 3806490 CGCCCTGCCAGTACA CCTCGCC-GCCGTCCGGGC GCGCCA GCCCGGTCAGCAGGCGCAG CAGGGTGGTTTTTCC TERM 5003 3806490 - 3806532 + g 75 -6 -4.56775 | opp_overlap 3806482 CAGTACACCTCGCCG CCGTCCGGGCGCGCCAGC CCGGTCA GCAGGCGCAGCAGGGTGG TTTTTCCGGCGCCGT yhjA 3808059 - 3806659 - | cytochrome c peroxidase TERM 5004 3807103 - 3807113 + g 82 -5.4 -5.09426 | AAAGGCGGAGTCCGG CGTT ATC AACG TTTTTTCAAATTCGG torD 3808881 - 3808249 - | chaperone protein TorD TERM 5005 3808754 - 3808776 + g 86 -14.9 -2.94293 | overlap 3808751 3808756 TTTAACAGCGCCAGC CAGTCCGCG ATCTC CGCGGACTG TAATTGTATTAACCC TERM 5006 3808756 - 3808774 + g 76 -11.7 -3.02147 | overlap 3808754 3808751 TAACAGCGCCAGCCA GTCCGCG ATCTC CGCGGAC TGTAATTGTATTAAC torA 3811426 - 3808874 - | trimethylamine-N-oxide reductase precursor TERM 5007 3809200 - 3809249 + g 91 -14.3 -3.14132 | gap 1, opp_overlap 3809200 CGCGTGCATTGAATA CCCGCACGATGTCACCGT-TGCGG ATC CCGCGCGCGCTGGCATCCTGTGGG TTAATAAAGACCGGC TERM 5008 3810704 - 3810722 + g 71 -4.5 -4.61231 | ATCGTGATCCGGGCA CCACCAG TTTGC CTGCTGG TTTTTCACCATATCA torC 3812600 - 3811416 - | hypothetical protein torR 3812730 - 3813422 + | DNA-binding transcriptional regulator TorR torT 3814435 - 3813395 - | periplasmic sensory protein associated with the TorRS two-component regulatory system TERM 5009 3814369 - 3814380 + g 71 -7.2 -3.97368 | GTAGCAGTCCGGTTT CGGC TGAC GCCG TTTCTACATTCGAGA TERM 5010 3815334 - 3815318 - g 82 -5.1 -5.04249 | overlap 3815321 GCTGGAAAAAATAAA CCAGTAC ACC ACACTGG TTACCCTGTTTCGTA TERM 5011 3816243 - 3816266 + G 74 -7.4 -4.08767 | gap 1, opp_overlap 3816255 GCGAAATTTACCGAT CGCG-GCAGCA TAG TGCTGCGCACG TTTTGCGACGATCAG TERM 5012 3817134 - 3817102 - g 84 -6.1 -5.04601 | overlap 3817103 3817104 CGCATAAATTAAAAA GCGGCTGCGCCAGCC TGG GGATGACGCAGGCAA CCGAAGCCTGTCGGG TERM 5013 3817133 - 3817103 - g 74 -9.6 -3.61676 | overlap 3817102 3817104 GCATAAATTAAAAAG CGGCTGCGCCAGCC TGG GGATGACGCAGGCA ACCGAAGCCTGTCGG torS 3814515 - 3817250 + | hybrid sensory histidine kinase TorS dgoT 3818613 - 3817276 - | major facilitator superfamily D-galactonate transporter TERM 5014 3817619 - 3817650 + g 77 -3.6 -5.03747 | gap 1, opp_overlap 3817602 3817618 AAACCGCAAATAATC GGCGTTTTGC-GCGC CAC GCCCAGCGAGAAGCC TTTTTTCACCAGTTT TERM 5015 3817884 - 3817899 + g 74 -2.4 -5.08824 | overlap 3817886 AGTCAGCTTTCGTCA GCGGCT GGCG GGCCTC TTTTTTCGCTGGCGC TERM 5016 3818656 - 3818672 + r 70 -10.1 -3.09784 | opp_overlap 3818653, overlap 3818655 TTATATTTAAATTGG GTTGCCC GGA GGGCGAC GTTTGTTGAGCCTAC TERM 5017 3820034 - 3820010 - R 73 -9.9 -3.38046 | opp_overlap 3820010, overlap 3819969 3820008 3820031 CGCCGACGGCAAATA GCGGAACATCC GGC GGAAGTACCGC TTTCAGCGCGCTGAT TERM 5018 3820010 - 3820034 + r 75 -9.9 -3.5393 | opp_overlap 3819969 3820010 3820008 3820031 CGCCGACGGCAAATA GCGGAACATCC GGC GGAAGTACCGC TTTCAGCGCGCTGAT TERM 5019 3820688 - 3820724 + r 95 -14.4 -3.60074 | gap 1, opp_overlap 3820689 3820708, overlap 3820689 GCAAGATGTCCCAAC ACG-TGCGTGGCGCGCG CAAA CGCCCGCCACGCAGCGC TTTAAAGAGTTTCTA TERM 5020 3820723 - 3820689 - R 100 -17.9 -3.04248 | gap 1, opp_overlap 3820688 3820689, overlap 3820708 CAAGATGTCCCAACA CG-TGCGTGGCGCGCG CAAA CGCCCGCCACGCAGCG CTTTAAAGAGTTTCT TERM 5021 3820689 - 3820723 + r 100 -17.9 -2.75562 | gap 1, opp_overlap 3820689 3820708, overlap 3820688 CAAGATGTCCCAACA CG-TGCGTGGCGCGCG CAAA CGCCCGCCACGCAGCG CTTTAAAGAGTTTCT TERM 5022 3820798 - 3820763 - R 84 -14 -2.77999 | gap 1, opp_overlap 3820758, overlap 3820760 3820758 TATGGATGAACATCA TGATGCCCCGGCCAGCC AGC GGCGGGCCGGGG-ATTA AGGCAGGTTAAATAT gyrB 3823220 - 3820806 - | DNA gyrase subunit B TERM 5023 3823022 - 3823047 + g 73 -10.5 -3.38046 | overlap 3823020 TTACGGACACGGAGT TATCGGCGTGA ATAG TCACGACGATA TCTTTACAGTGACCC recF 3824322 - 3823249 - | recombination protein F dnaN 3825570 - 3824470 - | DNA polymerase III subunit beta TERM 5024 3825503 - 3825534 + g 81 -8.6 -4.30809 | gap 1, opp_overlap 3825486 GGCAGCGTAGGACGA CCGC-CCAGCGGGCC GCT GACCTGCTGAAGCGG TTTTAATAAATGTTC dnaA 3826975 - 3825575 - | chromosomal replication initiation protein TERM 5025 3826027 - 3826051 + g 91 -7.1 -5.14965 | overlap 3826019 ACGCTACTTCGCCTG GCAGACGAATA TCA TTTTCGTCCGC TTTTTTCATCAGGAT TERM 5026 3826661 - 3826671 + g 71 -8.2 -3.88232 | overlap 3826641 AGGCGCTACGCGCTG CGGC TGC GCCG TTGTTGTCTGCGCAG rpmH 3827636 - 3827776 + | 50S ribosomal protein L34 rnpA 3827793 - 3828152 + | ribonuclease P SPA3685 3828116 - 3828373 + | hypothetical protein TERM 5027 3828726 - 3828710 - g 89 -13.7 -3.58343 | TCTATCAGGCGCAAA GCGGCCT GAC AGGCCGC GACGGTCCGGATAAC yidC 3828376 - 3830022 + | putative inner membrane protein translocase component YidC TERM 5028 3830137 - 3830110 - f 78 -12.8 -2.58861 | opp_overlap 3830115, overlap 3830115 TATCAGGCCTACAAT CAAAAGGCGGTC ATAT GACCGCCTTTTT TTATTGCAACAAAGT TERM 5029 3830132 - 3830115 - f 100 -12.7 -4.48987 | opp_overlap 3830115, overlap 3830110 GGCCTACAATCAAAA GGCGGTC ATAT GACCGCC TTTTTTTATTGCAAC TERM 5030 3830115 - 3830132 + F 100 -12.7 -5.7946 | opp_overlap 3830115 3830110 GGCCTACAATCAAAA GGCGGTC ATAT GACCGCC TTTTTTTATTGCAAC trmE 3830164 - 3831528 + | tRNA modification GTPase TrmE TERM 5031 3831676 - 3831718 + F 75 -6.4 -4.53163 | overlap 3831713 CGCGCAACGTCGCCC CGTATTCTTAGC-GCCACAC TTTTC GTGAGGCCGCTATGAA-ACG TTTTCTACTGTGTAG yidY 3831711 - 3832898 + | multidrug efflux system protein MdtL yidZ 3832867 - 3833826 + | DNA-binding transcriptional regulator YidZ yieE 3833984 - 3834739 + | hypothetical protein yieF 3834757 - 3835323 + | hypothetical protein TERM 5032 3835332 - 3835362 + T 79 -9.6 -3.78022 | opp_overlap 3835336, overlap 3835336 AGCGTAAGTTCGTTA AAAACCCTCCCCCC GAT GGGGCGAGGGTTCA TTTCATCAGTGTGCG TERM 5033 3835336 - 3835358 + T 95 -14.8 -3.57418 | opp_overlap 3835336, overlap 3835332 TAAGTTCGTTAAAAA CCCTCCCCCC GAT GGGGCGAGGG TTCATTTCATCAGTG TERM 5034 3835358 - 3835336 - T 100 -14.8 -4.58283 | opp_overlap 3835336 3835332 TAAGTTCGTTAAAAA CCCTCCCCCC GAT GGGGCGAGGG TTCATTTCATCAGTG yieG 3836831 - 3835368 - | putative membrane transport protein TERM 5035 3835841 - 3835821 - G 74 -6.7 -4.28111 | overlap 3835823 GATACTATCAACAAA CAGCGCCTG CTT CATGCGCGG GAATTTGCCTTTCTC TERM 5036 3836584 - 3836570 - G 74 -2.1 -5.06414 | GCGGGTTAACAAAAA CGATA TAAAC CATCG TCAGGAAAGTGGTAA yieH 3836874 - 3837524 + | 6-phosphogluconate phosphatase TERM 5037 3837574 - 3837546 - T 86 -11 -3.75332 | gap 1, overlap 3837547 ACGCGTTAACTGAAA TGCCGGATG-GCG CTAA CGCTCATCCGGCC TACAGCATCTGTACC TERM 5038 3837573 - 3837547 - T 87 -14.5 -2.84878 | gap 1, overlap 3837546 CGCGTTAACTGAAAT GCCGGATG-GCG CTAA CGCTCATCCGGC CTACAGCATCTGTAC phoU 3838359 - 3837634 - | transcriptional regulator PhoU pstB 3839147 - 3838374 - | phosphate transporter subunit pstA 3840124 - 3839234 - | phosphate transporter permease subunit TERM 5039 3839893 - 3839919 + g 93 -17.3 -2.94144 | gap 1, overlap 3839890 GGGCGTTCGCCAGCC CGCCGCCCGCCG TGTT CGGCGG-CGGCG TCATTTCGGTAAACA pstC 3841083 - 3840124 - | phosphate transporter permease subunit TERM 5040 3841028 - 3840999 - G 77 -11.5 -3.53933 | gap 1, overlap 3840993 ACATCAATAGCACAA TCAGCGCAGCCAGT TTT ACCAGC-GCGCTGA AAATCATGTCGCCTT pstS 3842259 - 3841219 - | phosphate transporter subunit TERM 5041 3841972 - 3841995 + g 72 -3.8 -4.72272 | GATCACCGTCGGAAA CTGGAATAGG CCTT CCTGATTCAG TTTTTCGTCAGACAG TERM 5042 3842407 - 3842381 - H 100 -12.2 -5.67283 | AATGGAAATAAAAAA GCTGGCCCGGGG AGA CACCAGACCAGC CTGCAGGGGGAGATG TERM 5043 3843008 - 3842977 - g 70 -6.6 -4.08216 | opp_overlap 3842981, overlap 3842980 3843001 TGAGGTGGTGGAAAA CAATGGCTTTCATC TGCA AATGAAGGCCTTTG ACCACTACTTTGGTC SPA3699 3842594 - 3843904 + | hypothetical protein TERM 5044 3844030 - 3844013 - T 100 -12.7 -5.626 | opp_overlap 3844013 CAGCGCACAAAAAAA GGCCGTC TGTC GACGGCC TTCTGCCTGGTACTA TERM 5045 3844013 - 3844030 + T 85 -12.7 -3.38272 | opp_overlap 3844013 CAGCGCACAAAAAAA GGCCGTC TGTC GACGGCC TTCTGCCTGGTACTA glmS 3845883 - 3844054 - | D-fructose-6-phosphate amidotransferase TERM 5046 3845072 - 3845086 + g 74 -4.9 -4.74801 | opp_overlap 3845055, overlap 3845055 TGACCGTGGCTGATG CGCCC GGTAA GGGTG TTTTTGATCGCGTTC glmU 3847442 - 3846072 - | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 5047 3847737 - 3847718 - R 100 -11.4 -5.1417 | opp_overlap 3847718 TCAGAAAAGCAAAAA CCAGCGAC AGAG GCCGCTGG TTTTCCGTTGCGCGT TERM 5048 3847718 - 3847737 + r 83 -9.2 -4.27584 | opp_overlap 3847718 TCAGAAAAGCAAAAA CCAGCGAC AGAG GCCGCTGG TTTTCCGTTGCGCGT SPA3702 3848460 - 3847762 - | hypothetical protein TERM 5049 3848372 - 3848357 - G 75 -6 -4.55023 | overlap 3848349 CTCAACACGATAAAA CCGACG ATGG CGACGG CGAGATGAAGATAAG TERM 5050 3848573 - 3848560 - R 81 -8.1 -4.43879 | opp_overlap 3848567, overlap 3848562 AGGATTTAATGAAAA CAGCG CTGT CGCTG AAAACGCATCGCCTT TERM 5051 3848649 - 3848668 + r 82 -7.8 -4.61566 | opp_overlap 3848649, overlap 3848644 GAGGATAAAAAAAAA CCAGTCCG CAAT CAGACTGG TTTTATGCTTTCAAG TERM 5052 3848668 - 3848649 - R 100 -10 -6.26417 | opp_overlap 3848649 3848644 GAGGATAAAAAAAAA CCAGTCCG CAAT CAGACTGG TTTTATGCTTTCAAG atpC 3849109 - 3848690 - | F0F1 ATP synthase subunit epsilon atpD 3850512 - 3849130 - | F0F1 ATP synthase subunit beta atpG 3851402 - 3850539 - | F0F1 ATP synthase subunit gamma TERM 5053 3851227 - 3851260 + g 79 -12.5 -2.91264 | opp_overlap 3851227, overlap 3851238 TTATATTCCAGATTA CCGTTCGCAAGGTGA CCAA TCACTTTGCGCATGG TCTCTGCATAAGGAC atpA 3852994 - 3851453 - | F0F1 ATP synthase subunit alpha TERM 5054 3852432 - 3852468 + g 83 -10.1 -4.13014 | overlap 3852426 3852433 CATTTGATGCCGGAG TCGCGCTGGTTGATGAT GGC GTCGATAGCCAGCGCGG TTTTACCGGTCTGAC TERM 5055 3852433 - 3852467 + g 72 -11.4 -3.07487 | overlap 3852426 3852432 ATTTGATGCCGGAGT CGCGCTGGTTGATGAT GGC GTCGATAGCCAGCGCG GTTTTACCGGTCTGA atpH 3853540 - 3853007 - | F0F1 ATP synthase subunit delta atpF 3854025 - 3853555 - | F0F1 ATP synthase subunit B TERM 5056 3853899 - 3853920 + g 71 -7.3 -3.92869 | opp_overlap 3853893 3853892 CAGCAGAAGCGAGAC CGTCAGCAA TTTC TTTCTGACG TTTCTCGATGGCTGC atpE 3854324 - 3854085 - | F0F1 ATP synthase subunit C atpB 3855186 - 3854371 - | F0F1 ATP synthase subunit A TERM 5057 3854873 - 3854853 - G 74 -11.1 -3.29325 | overlap 3854851 GGTTCATAAGGAATA CCCAGACGA AAA TCGTCAGGG CCAGCGGCGCAATCA atpI 3855575 - 3855195 - | F0F1 ATP synthase subunit I gidB 3856814 - 3856191 - | glucose-inhibited division protein B gidA 3858806 - 3856917 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 5058 3857097 - 3857123 + g 70 -3 -4.7173 | overlap 3857088 ATCCAGCGTGGCAGG CAGCAACGTA TTCTCGT TACGTAGTTG TTTTTCAATCTCATC mioC 3859628 - 3859185 - | flavodoxin TERM 5059 3859745 - 3859713 - R 79 -4.2 -5.14563 | gap 1, opp_overlap 3859713 3859714, overlap 3859714 TGTGGGATTAAAAAA GCCGATCATG-GC TTGATGGT GCGCATGATCGGG TTCTGCAAGACGATC asnC 3860176 - 3859718 - | DNA-binding transcriptional regulator AsnC TERM 5060 3860636 - 3860581 - g 79 -13.5 -2.73875 | gap 2 CCTGGGGCAACATGA CTTCAGCGCGGGCGAAGGACTGTACAC GCAC ATGAA-AGCCCTTCGCCC-CGATGAAG ACCGACTCTCTCCGC TERM 5061 3860889 - 3860912 + G 74 -3.1 -4.91109 | gap 1, opp_overlap 3860877, overlap 3860892 AAGGGCGCGAACGCG CGATCGCCAA AGAAC TTGGCGC-CG TTTTTCTGGTGGGGA asnA 3860327 - 3861319 + | asparagine synthetase AsnA yieM 3862775 - 3861324 - | hypothetical protein TERM 5062 3861725 - 3861702 - G 83 -8 -4.40181 | overlap 3861705 AAACAGCATAATAAA GCAGCGGCGG TTAT CCGCCAGCGC AACGCGCATCAACGC TERM 5063 3862154 - 3862170 + g 74 -10.1 -3.67188 | overlap 3862152 TTAGCTCCGGCTGGG CGGCGAG AAA TTCGCCG TATTTTACGATCAGT TERM 5064 3862631 - 3862644 + g 77 -3.7 -5.00616 | overlap 3862636 GCCAGCGCGTGAGAT CGGCG GTCA CGGCG TTTTTTAAACGCGGA yieN 3864265 - 3862769 - | regulatory ATPase RavA TERM 5065 3863238 - 3863265 + g 70 -5.6 -4.51799 | opp_overlap 3863238, overlap 3863224 3863262 CGGCGGCTGAACATA CCGCCTTC TTTAATGACGGT GAAGGCGG TTTTATCGCTTTGCT TERM 5066 3863781 - 3863797 + g 70 -10.1 -3.33696 | AAGGCTTCCAGGCTG CTGTCCG CTT CGGGCAG TTCGTTAGAGGCCGC TERM 5067 3864074 - 3864063 - G 77 -7.2 -4.26589 | ATCAGATATTCAAAA GCGC GGGC GCGC TGGAAAGCAAACTTC TERM 5068 3864416 - 3864430 + H 79 -4.2 -5.24129 | overlap 3864415 ATTTTATGATTAATC GTGCAT ACT GTGCGC TTTTTTGTGGGCCAA TERM 5069 3865505 - 3865525 + G 81 -11.9 -3.58731 | overlap 3865496 3865494 CCGCGCTGGCGACGG TGATCGCCT CCC AGGCGGTCA TTTCCGGCGTCTTTT trkD 3864613 - 3866481 + | potassium transport protein Kup TERM 5070 3867030 - 3867013 - g 81 -4.1 -5.2166 | overlap 3867001 3867005 3867014 GAACAATTCAAAAAA TTGACTG CAGA CAGTCAG GCGGTGATTCGCAGC TERM 5071 3867038 - 3867068 + G 81 -12.7 -3.06509 | gap 1, overlap 3867033 3867066 ACAGTCAGGCGGTGA TTCGCA-GCGGGGA GTGT TCCCCGTATGCGAA TGTCATTCTTTGCGC rbsD 3866680 - 3867099 + | D-ribose pyranase rbsA 3867107 - 3868612 + | D-ribose transporter ATP binding protein TERM 5072 3868722 - 3868734 + F 77 -3.4 -5.10029 | CGCGATTGTTTCGAC GTTG AGCCC CAAC TTTTTTACCGTTAAT TERM 5073 3870058 - 3870041 - g 76 -3.3 -5.04385 | overlap 3870042 3870043 TATATCGCGAAAAAA GCTGGCG AAGG CGCCAAA GTGATTGAGCTGCAA TERM 5074 3870481 - 3870452 - g 70 -2.9 -4.70879 | overlap 3870453 3870467 CTGAAAGGCGAAAAA GTTCAGGCCAA ATATCCGG TTGACCTGAAA CTGGTCATCAAGCAG rbsB 3869609 - 3870499 + | D-ribose transporter subunit RbsB TERM 5075 3871347 - 3871333 - g 77 -11.4 -3.59979 | opp_overlap 3871332 3871331 3871323 3871322 CTGGGCCAGCGTAAA CGGCGA GGG TCGCCG CGTTCCTGGATTTAG rbsK 3870632 - 3871561 + | ribokinase TERM 5076 3872326 - 3872340 + T 74 -11.4 -2.87132 | ATGCGATGGCTGTCG GCGCCT ATC AGGCGC TATATCAGGCGGGGC yieO 3873957 - 3872530 - | MFS family tranport protein TERM 5077 3873671 - 3873651 - G 73 -6.2 -4.42748 | CGACGCGAAAAATAA CCAATTCA GATAG TGAACTGG AGAGCGCGCAGGCCA TERM 5078 3873927 - 3873901 - G 71 -7.3 -4.06419 | gap 2 CGCCTGCATAAAGAA GGCCATCGCCGCG ATC CACGGC-A-GGCC AGCCATACTGCGCGC yieP 3874673 - 3873969 - | hypothetical protein TERM 5079 3874601 - 3874611 + g 70 -6.8 -4.07568 | CACCCTTTAATATCC GCTG CGC CAGC TTTTCAGCCAGAACA TERM 5080 3874958 - 3874942 - R 76 -5.1 -4.75954 | AAAAGCGAAAATAAA CGCTTGA CTC TGAAGCG GGAAAGCGTAATATA TERM 5081 3876893 - 3876928 + r 77 -9.2 -4.00532 | opp_overlap 3876895 3876904 AGTCACCTGCCTTAA TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA TTTGCTCTTTAAAAA TERM 5082 3876992 - 3876968 - R 71 -8 -3.93061 | gap 1, opp_overlap 3876968 3876975, overlap 3876972 3876978 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5083 3877546 - 3877534 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5084 3880391 - 3880410 + r 100 -10.8 -6.11644 | opp_overlap 3880391 CCCTGCCAGAAATAA TCCTTAGC ATCT GCTAAGGA TTTTTTTTTGCCTGA TERM 5085 3880410 - 3880391 - R 87 -10.8 -4.06419 | opp_overlap 3880391 CCCTGCCAGAAATAA TCCTTAGC ATCT GCTAAGGA TTTTTTTTTGCCTGA yifA 3881321 - 3880485 - | transcriptional regulator HdfR yifE 3881440 - 3881778 + | hypothetical protein TERM 5086 3881807 - 3881783 - T 87 -9.9 -4.2704 | opp_overlap 3881786, overlap 3881785 3881786 CTGATGATTAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 5087 3881805 - 3881785 - T 93 -12.5 -3.73445 | opp_overlap 3881786, overlap 3881783 3881786 GATGATTAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 5088 3881804 - 3881786 - T 93 -16 -2.83344 | opp_overlap 3881786, overlap 3881785 3881783 ATGATTAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 5089 3881786 - 3881804 + T 100 -16 -4.91109 | opp_overlap 3881786 3881785 3881783 ATGATTAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 3882344 - 3881886 - | transposase for insertion sequence element IS200 TERM 5090 3882457 - 3882475 + r 100 -16 -4.18197 | opp_overlap 3882447 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAT TERM 5091 3882508 - 3882496 - R 85 -6.2 -5.27206 | opp_overlap 3882496, overlap 3882490 3882497 CATAGACAATAAAAA GGGC GTAAT GCCC TTTTTTTACGCCAAC TERM 5092 3882496 - 3882508 + r 90 -6.9 -5.40072 | opp_overlap 3882490 3882496 3882497 CATAGACAATAAAAA GGGCG TAA TGCCC TTTTTTTACGCCAAC yifB 3884034 - 3882598 - | putative magnesium chelatase, subunit ChlI TERM 5093 3882797 - 3882811 + g 80 -4.2 -5.0538 | TACTGCCGTTCATGG GCGG CGATGAC CCGC TTTTTTACCGTAGCG TERM 5094 3883244 - 3883257 + g 72 -2.3 -4.8667 | opp_overlap 3883244 GGTGAGCGAAAGGGA CGTTG CTGC CATCG TTTTTGTACCGTATC TERM 5095 3884276 - 3884265 - H 77 -3.6 -5.13354 | CTTATAAAAAACAAA GCCC TTTT AGGC ATTCACCTGCATTAT ilvL 3884386 - 3884484 + | ilvG operon leader peptide TERM 5096 3884510 - 3884531 + F 100 -11.5 -6.09133 | opp_overlap 3884509 3884507 3884510 TTAACGAACTAAGAC CCCCGCACC GAAA GGTCCGGGG TTTTTTTTTGGCCTG TERM 5097 3884531 - 3884510 - f 73 -11.5 -2.57354 | opp_overlap 3884510, overlap 3884509 3884507 TTAACGAACTAAGAC CCCCGCACC GAAA GGTCCGGGG TTTTTTTTTGGCCTG TERM 5098 3884785 - 3884819 + G 71 -7.8 -4.03413 | overlap 3884769 3884765 3884787 3884788 TGCCGCAATGGCGGC AATCGGTTATGCCCGT TCT ACTGGCAAAACCGGTG TTTGTATCGCCACCT TERM 5099 3884787 - 3884817 + G 74 -10.4 -3.61232 | overlap 3884765 3884785 3884788 CCGCAATGGCGGCAA TCGGTTATGCCCGT TCT ACTGGCAAAACCGG TGTTTGTATCGCCAC TERM 5100 3884788 - 3884816 + G 72 -11.7 -2.76418 | overlap 3884765 3884787 3884785 CGCAATGGCGGCAAT CGGTTATGCCCGT TCT ACTGGCAAAACCG GTGTTTGTATCGCCA ilvG 3884624 - 3886270 + | acetolactate synthase 2 catalytic subunit ilvM 3886270 - 3886530 + | acetolactate synthase 2 regulatory subunit TERM 5101 3886537 - 3886520 - f 72 -5.5 -4.3767 | overlap 3886522 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAAGAAAAATGAC ilvE 3886548 - 3887477 + | branched-chain amino acid aminotransferase TERM 5102 3889159 - 3889177 + G 82 -11 -3.86346 | TGGGCAAAGCCTGCG CGCTCATC ACC GATGGGCG TTTCTCCGGCGGTAC ilvD 3887634 - 3889484 + | dihydroxy-acid dehydratase TERM 5103 3889746 - 3889721 - g 84 -3.1 -5.30348 | opp_overlap 3889720, overlap 3889723 ACCGAAGAACAAAAA GCCCACGGCGT GATT ACCGCGTCGGC GGGGAACCATGCACA TERM 5104 3891002 - 3891013 + G 71 -7.2 -4.06687 | opp_overlap 3891001 3891002 GATGAGAGCAATAAC CCGG CGTT CCGG TTCTTTCTGGCGGGT ilvA 3889487 - 3891031 + | threonine dehydratase TERM 5105 3891258 - 3891241 - f 72 -5.7 -4.40963 | ACCTGCTAAAAACAA TGTATAA AATT TTATACA AAAAGATGTTATGTT SPA3745 3891269 - 3891631 + | hypothetical protein SPA3746 3891628 - 3891969 + | hypothetical protein ilvY 3892859 - 3891972 - | DNA-binding transcriptional regulator IlvY TERM 5106 3892007 - 3892023 + g 100 -9.4 -5.40072 | opp_overlap 3892007 3891996 AGAACGCATCAATTA GCGGCT CATGC AGCCGC TTTTTTTGCGCGCAG TERM 5107 3892751 - 3892719 - G 93 -13.4 -3.86897 | opp_overlap 3892717 GTTATCGCGCACAAA CAGCGGCTGGCCGA GGTCT TCTTCCAGCCGCTG AATCTGTCGGGAAAG TERM 5108 3892825 - 3892810 - G 86 -10.4 -4.07568 | opp_overlap 3892800 3892816 3892816 GCGCTGCGGCCAAAA TGGCGG CTTT CCGCCA GATGCAGGAAGGTTT TERM 5109 3893072 - 3893050 - g 87 -13.4 -3.19175 | CTTTAATACACTGAA TCTGCGCCAG CAG CTGGCGCAGC TGGGTAAATGTCGCT ilvC 3893024 - 3894499 + | ketol-acid reductoisomerase TERM 5110 3894560 - 3894587 + T 89 -6.3 -5.28942 | gap 2 AAGCAGACGATGTAG GTCGGGTAAGGCG TAGC CGCC--ACCCGGC TTTTTATTTACGATA ppiC 3894872 - 3894591 - | peptidyl-prolyl cis-trans isomerase C TERM 5111 3895021 - 3895042 + H 80 -10.1 -3.85698 | GGGCGTATTTCGGAT GGGCGGGAC GACG GTCCTGTCC TTTCTGACAAGGGGC TERM 5112 3895440 - 3895485 + G 71 -4.6 -4.56597 | gap 1 GCAAGCACATTTTTG CCGCTGGCTGGCGCTGGATAA CCACT TTAACCAGCGAATGCT-GCGG TTTTTCAGCCAACAG SPA3750 3895339 - 3895767 + | hypothetical protein TERM 5113 3895863 - 3895886 + G 78 -5.9 -4.71426 | TTTGCCCGGCGATCC CGGGCGGGT GGATAG AATCGCCCG TTTTCTTGATAAGGC TERM 5114 3896449 - 3896430 - g 84 -13.6 -3.10464 | opp_overlap 3896422 3896444, overlap 3896422 CCAGCAAGGTGAAGA GCGCCAGA TTTC TCTGGCGC TTCAGGCCATTTATT SPA3751 3895795 - 3896490 + | uridine phosphorylase SPA3752 3896490 - 3897218 + | putative membrane transport protein TERM 5115 3897229 - 3897254 + F 86 -13.3 -3.32202 | overlap 3897227 GCTGATTGACCTTTT CCAGGCTGCCT GAAA AAGCAGCCTGG TCTTCTCTGGGCCTC rep 3897318 - 3899342 + | ATP-dependent DNA helicase Rep gppA 3900863 - 3899382 - | guanosine pentaphosphate phosphohydrolase TERM 5116 3901499 - 3901517 + H 71 -3.8 -4.73864 | overlap 3901500 CACTCTTCTTCGATC AGCGTTTG CAG TAAACGCA TTTTCTCTTCATTAG trxA 3902393 - 3902722 + | thioredoxin TERM 5117 3902732 - 3902782 + F 71 -10.6 -2.74563 | gap 1 GCGTAATACCTTTTA TACGTCGAATGACAAAGGCGCTG TATGGT CAG-GCGTCTGTCATTCGACGAA TGATTAAGGTATCAG rho 3903141 - 3904400 + | transcription termination factor Rho TERM 5118 3904414 - 3904445 + F 100 -14.6 -4.20696 | opp_overlap 3904402 3904420, overlap 3904420 AACCTGGTCTTTACC TGAAAACGCCACGT TTTT ACGTGGCGTTTTTG TTTTGCGATTCATCC TERM 5119 3904439 - 3904420 - f 100 -13.6 -4.13767 | opp_overlap 3904414 3904420 GTCTTTACCTGAAAA CGCCACGT TTTT ACGTGGCG TTTTTGTTTTGCGAT TERM 5120 3904420 - 3904439 + F 100 -13.6 -5.46706 | opp_overlap 3904420, overlap 3904414 GTCTTTACCTGAAAA CGCCACGT TTTT ACGTGGCG TTTTTGTTTTGCGAT TERM 5121 3904741 - 3904721 - g 85 -7 -4.89339 | opp_overlap 3904720 AAGTAGCCATAAAAA TTGGTTTA GTGGA TAAACCAA ACTTTCGTAAACGAC TERM 5122 3904798 - 3904809 + G 71 -5.8 -4.33928 | overlap 3904785 GGGATTTCTGTGTTT GCAG GAAT CTGC TTTATGTTTGGCCTC rfe 3904630 - 3905733 + | putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase wzzE 3905745 - 3906791 + | lipopolysaccharide biosynthesis protein WzzE TERM 5123 3906803 - 3906826 + F 80 -12.5 -3.06696 | overlap 3906805 TTAGCAACACCTCTG CAGTAGGGG GCTGGG CCCCTACTG TCTATTCGAAGAGAA wecB 3906847 - 3907977 + | UDP-N-acetyl-D-glucosamine 2-epimerase TERM 5124 3909043 - 3909016 - g 74 -10.6 -3.55444 | gap 1, overlap 3909019 TGGGGATCGCGCAAA GTATCGCCCGCTG GCA CAGCGG-CGAAAC CCTGGTCGTCGAACC wecC 3907974 - 3909236 + | UDP-N-acetyl-D-mannosamine dehydrogenase rffG 3909236 - 3910303 + | dTDP-glucose 4,6-dehydratase TERM 5125 3910647 - 3910665 + G 81 -3.9 -5.14965 | TGAACCCTCATGCCT GGTATTG GGCGA CAATATC TTTTTTGGTCAGGGT TERM 5126 3910825 - 3910815 - g 71 -4.6 -4.63218 | CTCGTTGGAAGAAAA GCCG AAA CAGC CTAAATCTAACTGGG TERM 5127 3911175 - 3911162 - g 74 -2.3 -5.03314 | overlap 3911163 GTCAGCTTGAAAAAA CCGGC TATG GCCAA TATTTACTGGAGTTG rffH 3910336 - 3911217 + | glucose-1-phosphate thymidylyltransferase TERM 5128 3911329 - 3911306 - f 73 -11 -2.54794 | overlap 3911295 3911305 3911303 TTAACGCCAGAAGAG CTGCAGGCGT GGCA ACGCGTGCAG GTAAAAGTGCCGGCT TERM 5129 3911544 - 3911559 + G 71 -4.6 -4.57073 | overlap 3911546 CGCCGTGGTATGCGC CCGACG CCAG CGTCCG TTTTTACGCCCAGTG rffC 3911324 - 3911872 + | TDP-fucosamine acetyltransferase TERM 5130 3912751 - 3912731 - g 74 -7.5 -4.09685 | opp_overlap 3912731 3912732, overlap 3912732 TTCTATTCCGGAAAA CTGCGGGCA TAA TGCCCACAT GTTTTACATCAAACT TERM 5131 3912732 - 3912750 + G 70 -8.8 -3.69216 | opp_overlap 3912731 3912732, overlap 3912731 TCTATTCCGGAAAAC TGCGGGCA TAA TGCCCACA TGTTTTACATCAAAC TERM 5132 3912750 - 3912732 - g 72 -11 -3.05597 | opp_overlap 3912732 3912731, overlap 3912731 TCTATTCCGGAAAAC TGCGGGCA TAA TGCCCACA TGTTTTACATCAAAC rffA 3911877 - 3913007 + | TDP-4-oxo-6-deoxy-D-glucose transaminase wzxE 3913009 - 3914259 + | putative lipopolysaccharide biosynthesis protein TERM 5133 3914308 - 3914318 + G 74 -4.6 -4.68593 | opp_overlap 3914303 CTCACCATAACCACA CCGT GCT GCGG TTTTTCAATGATACG TERM 5134 3914407 - 3914422 + G 72 -2.4 -4.84359 | TCACGGAAAGCTGTC CGGCGC TCTC GCTTCG TTTTTATGGCAGTAA TERM 5135 3914611 - 3914625 + G 70 -5.6 -4.386 | ACGAAGTGTCCAACG GGCTGA AAT TCCGCC TTTTCTACCCGCTTC SPA3767 3914256 - 3915335 + | 4-alpha-L-fucosyltransferase TERM 5136 3915620 - 3915603 - g 88 -9.9 -4.42653 | opp_overlap 3915603, overlap 3915617 3915618 ACGTGACCTATAAAA CGCGTTT ACGC AAACGCG TTGTGGATGTACCAC TERM 5137 3915603 - 3915620 + G 70 -9.9 -3.39327 | opp_overlap 3915603 3915617 3915618 ACGTGACCTATAAAA CGCGTTT ACGC AAACGCG TTGTGGATGTACCAC rffT 3915332 - 3916690 + | putative entero common antigen polymerase TERM 5138 3917079 - 3917068 - g 73 -5.8 -4.44548 | CAGACGGAAGCAAAA CTGC GGAC GCAG TGGAACGTCAATATT rffM 3916687 - 3917427 + | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 5139 3917605 - 3917593 - f 79 -9.1 -4.03888 | TACCCATAACAATAA CCGGT ACT ACCGG AACCGTTGCAAACAC TERM 5140 3918606 - 3918581 - g 87 -8.3 -4.56597 | gap 1, overlap 3918582 CGCGCTGGCGAAAAA CCGTCAACTGCC GGC GGCAGTCG-CGA AAGTCTCTCGCCACG TERM 5141 3918605 - 3918582 - g 70 -9.6 -3.33744 | gap 1, overlap 3918581 GCGCTGGCGAAAAAC CGTCAACTGCC GGC GGCAGTCG-CG AAAGTCTCTCGCCAC TERM 5142 3918631 - 3918651 + G 70 -3.1 -4.70319 | overlap 3918615 3918614 3918633 3918635 GCCACGGCGTGCCGG TCGCGGGCG TGG CGCTCTCTA TTTTGATTTTGCTGG yifK 3917634 - 3919019 + | putative transport protein YifK TERM 5143 3919578 - 3919563 - T 93 -11.8 -3.67976 | opp_overlap 3919563 CCGACCAATTTTAAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT TERM 5144 3919563 - 3919578 + T 100 -11.8 -5.8901 | opp_overlap 3919563 CCGACCAATTTTAAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT TERM 5145 3920037 - 3920061 + T 100 -14.3 -5.64274 | ACAGACCTGTTTTGA CGCCTGCCC CTTAACC GGGCAGGCG TTTTTTTATGCATCC hemY 3921332 - 3920136 - | putative protoheme IX biogenesis protein TERM 5146 3920804 - 3920826 + g 70 -5.4 -4.4078 | overlap 3920805 CCTCCAGCAGTTTGT CCACGCCGTG ACG CGCCGCGTGA TTTTCATTGCGCGCC hemX 3922504 - 3921335 - | putative uroporphyrinogen III C-methyltransferase TERM 5147 3922118 - 3922141 + g 79 -3 -5.24416 | overlap 3922119 CAGCCAGGTTTTAGC ATCGCTGCCG GAAA TGGTGGCGAC TTTTTGTTGTACTTC TERM 5148 3922288 - 3922302 + g 82 -11.4 -3.84451 | overlap 3922282 CGGTCAGTTGCGTCG CCAGCG CAT CGCTGG TTTCCGTTTGCGCGG TERM 5149 3922376 - 3922406 + g 83 -9.6 -4.11105 | opp_overlap 3922393 CAGGGCAATCGCGAT CGCCACCGCGCT TAATACC AGCGCGGCGCCG TTCTTACTTTTTTTC hemD 3923266 - 3922526 - | uroporphyrinogen-III synthase hemC 3924204 - 3923263 - | porphobilinogen deaminase TERM 5150 3923480 - 3923500 + g 84 -13.3 -3.15579 | CCAATCGGCACCTGA CATCCGCCT TCC AGGCGGGTG TTCATAGCGCGTTCC TERM 5151 3923894 - 3923884 - G 74 -8.2 -4.05033 | overlap 3923885 TTTATTCGAGACAAA CGCG TCG CGCG GATCTTCGCGCTCGC cyaA 3924581 - 3927127 + | adenylate cyclase SPA3781 3927235 - 3927588 + | hypothetical protein TERM 5152 3927581 - 3927594 + F 73 -9.5 -3.30243 | ACTGTGCCGGATGGC GGCGC TAAC GCGCC TTATCCAGCCTACAT SPA3782 3927774 - 3928316 + | hypothetical protein TERM 5153 3928549 - 3928535 - g 80 -5.6 -4.95957 | opp_overlap 3928535 GAAATCAAGGAAAAA CGTTGG TCA CCAGCG TTACGTCAACTTTTT SPA3783 3928328 - 3928690 + | hypothetical protein cyaY 3929081 - 3928761 - | frataxin-like protein SPA3785 3929504 - 3929151 - | hypothetical protein TERM 5154 3929471 - 3929484 + g 95 -9.5 -4.6856 | opp_overlap 3929465, overlap 3929466 ATGAACCGATCCCCA CGCCC CGAA GGGCG TTTTTCAGATGTTTA TERM 5155 3930355 - 3930338 - g 74 -3.3 -4.85599 | overlap 3930340 GCCAGCCGATAAAAA TGCGCCG CCGC CGACGAA AAAAGTCGATTCGCA yifL 3930237 - 3930440 + | putative lipoprotein dapF 3930477 - 3931301 + | diaminopimelate epimerase yigA 3931298 - 3932005 + | hypothetical protein xerC 3932002 - 3932904 + | site-specific tyrosine recombinase XerC TERM 5156 3933316 - 3933288 - g 82 -5.2 -5.0133 | overlap 3933290 3933311 CAGCTTGCGAAAAAA TGGCCGCTGGTG GCGAT CACTAACGGCAA TGCCCAGCCGGAACT yigB 3932904 - 3933620 + | flavin mononucleotide phosphatase TERM 5157 3933710 - 3933721 + F 87 -7.2 -5.1166 | opp_overlap 3933694 3933709, overlap 3933696 3933695 CCCCGGTAAGCGAAG CGCC ACCG GGCG TTTTTAGTTTTCATG TERM 5158 3935125 - 3935100 - g 100 -11.8 -4.8048 | opp_overlap 3935111 TTGTTACAGGAAAAA GCCCTGGCCG GGCGTG CGGCCAGCGC GCTGCAACGCTTTAT uvrD 3933756 - 3935918 + | DNA-dependent helicase II TERM 5159 3936431 - 3936419 - g 85 -2.6 -5.47399 | TCAACTGGAAAAAAA CCGA CTGAC CCGG CTGGAAGTCGAGGAG corA 3936390 - 3937340 + | magnesium/nickel/cobalt transporter CorA TERM 5160 3937376 - 3937343 - T 89 -11.1 -4.08692 | gap 1, opp_overlap 3937342 3937351, overlap 3937345 3937347 GAACTGGCTGTAAAA TATACGGACTGGCGAT TTA ACCGCCAGTCCGT-TG GAAGTTCTTCATCAT TERM 5161 3937375 - 3937345 - T 100 -16.2 -3.63922 | opp_overlap 3937342 3937351, overlap 3937343 3937347 ACTGGCTGTAAAATA TACGGACTGGCGAT TTA ACCGCCAGTCCGTT GGAAGTTCTTCATCA TERM 5162 3937373 - 3937347 - T 100 -18.8 -3.39908 | opp_overlap 3937342 3937351, overlap 3937345 3937343 TGGCTGTAAAATATA CGGACTGGCGAT TTA ACCGCCAGTCCG TTGGAAGTTCTTCAT SPA3794 3937768 - 3937388 - | hypothetical protein TERM 5163 3937762 - 3937772 + g 78 -2.6 -5.1615 | TATCTTTAATAATCC TAAT CAT ATTA TTTTTTCCATATTGA SPA3795 3937943 - 3938239 + | hypothetical protein TERM 5164 3938276 - 3938240 - T 95 -11.8 -4.34486 | opp_overlap 3938242 3938247, overlap 3938242 3938247 ACTAAGAAGAAATAA CATAAAATGGCAGCCA GATAA TAGCTGCCATTTTATT ATTTAATGCTTACGC TERM 5165 3938242 - 3938274 + T 95 -12.2 -4.04927 | opp_overlap 3938240 3938242 3938247, overlap 3938247 TAAGAAGAAATAACA TAAAATGGCAGCCA GATAA TAGCTGCCATTTTA TTATTTAATGCTTAC TERM 5166 3938274 - 3938242 - T 100 -14.4 -3.75532 | opp_overlap 3938242 3938247, overlap 3938240 3938247 TAAGAAGAAATAACA TAAAATGGCAGCCA GATAA TAGCTGCCATTTTA TTATTTAATGCTTAC TERM 5167 3938269 - 3938247 - T 100 -9.9 -4.86029 | opp_overlap 3938242 3938247, overlap 3938242 3938240 AGAAATAACATAAAA TGGCAGCCA GATAA TAGCTGCCA TTTTATTATTTAATG TERM 5168 3938247 - 3938269 + T 88 -7.7 -5.02606 | opp_overlap 3938247 3938242 3938240, overlap 3938242 AGAAATAACATAAAA TGGCAGCCA GATAA TAGCTGCCA TTTTATTATTTAATG rarD 3939166 - 3938279 - | chloramphenicol-sensitive protein RarD TERM 5169 3938334 - 3938323 - G 71 -5.8 -4.3129 | CATCCATCACGAAAA TCGC CAGC GCGA CCCAGATAAACGCAA TERM 5170 3938426 - 3938408 - G 70 -3.1 -4.72986 | overlap 3938410 CACCGCCAGTAAAAA CATCAGC GTTGG GCCGATA TACTGGAAAAAGCCC yigI 3939677 - 3939210 - | hypothetical protein pldA 3939842 - 3940711 + | phospholipase A TERM 5171 3940746 - 3940767 + F 100 -12.3 -4.63479 | TTGCAGTTTCTCTCG CAGGCGCTG AAAA TAGCGCCTG TTTTGATTTATGGTG TERM 5172 3941668 - 3941678 + G 70 -6.8 -4.13945 | overlap 3941663 CTGCAAATCGTGGTG GCGA CCG TCGC TTTTGGAATGGGCAT TERM 5173 3942517 - 3942491 - g 71 -7.3 -4.04206 | gap 1, opp_overlap 3942494, overlap 3942474 CCACGTTGATAGAAA TGGCGG-AACAG ATGC CGGTTTCCGCCA GCGAGATGTTAAGCG recQ 3940780 - 3942624 + | ATP-dependent DNA helicase RecQ rhtC 3942688 - 3943308 + | threonine efflux system rhtB 3943968 - 3943348 - | homoserine/homoserine lactone efflux protein TERM 5174 3944532 - 3944573 + G 100 -13.8 -3.98159 | gap 2, overlap 3944568 CTGTTCCTGCAACGC CATCGTGTGCGGTGCGACGC TATT GCG-CTCACCGCGC-CGATG TTTGGTATTGTGATA pldB 3944079 - 3945095 + | lysophospholipase L2 yigL 3945111 - 3945911 + | putative sugar phosphatase TERM 5175 3946181 - 3946158 - gT 76 -5.2 -4.78149 | GGCACAACCTAAAAA CCATCAGCCT GTAT ATGCTGGTGG GGGCGATGCAGCTTG metR 3947732 - 3946779 - | trans-activator of metE and metH yigM 3945992 - 3946891 + | hypothetical protein TERM 5176 3947178 - 3947166 - Gf 72 -9.1 -3.51708 | opp_overlap 3947174, overlap 3947162 CACCGGGTAAATCAA CAGCG TTT CGCTG GCTAAATCTTCCGGC TERM 5177 3949174 - 3949163 - g 86 -7.2 -4.82901 | overlap 3949164 3949165 GCCGCGGTAGAAAAA CGCC TGGC GGCG ATCACCGCGCAGGAC metE 3947981 - 3950245 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase SPA3807 3950589 - 3951932 + | putative regulatory protein TERM 5178 3951929 - 3951915 - T 86 -2.8 -5.72118 | AAAAAATATAAAAAA TGCTGT GGT AAAGCA TAGCTAACGTGGCGA ysgA 3952824 - 3952012 - | putative hydrolase TERM 5179 3952408 - 3952391 - G 76 -2.7 -5.06414 | gap 1, overlap 3952392 CCTCCCCAACAAAAA CCGG-TGA TCA TCAGCCGA TGCGCATCCCCGCCG TERM 5180 3952943 - 3952956 + H 76 -5.3 -4.77036 | overlap 3952942 TATTGATTATTTATT GTGAT GCGC ATCAC TTTTTAATGGTAAAC udp 3953083 - 3953844 + | uridine phosphorylase TERM 5181 3953859 - 3953885 + F 95 -10.9 -4.65895 | opp_overlap 3953864, overlap 3953864 ATTCTCCTCTCTTTT GCAAAGGCCGA CGCGT TCGGCCTTTTC TTTTTGCGTGGCGCC TERM 5182 3953864 - 3953880 + F 100 -9.4 -5.2853 | opp_overlap 3953864, overlap 3953859 CCTCTCTTTTGCAAA GGCCGA CGCGT TCGGCC TTTTCTTTTTGCGTG TERM 5183 3953880 - 3953864 - f 72 -9.4 -3.53012 | opp_overlap 3953864 3953859 CCTCTCTTTTGCAAA GGCCGA CGCGT TCGGCC TTTTCTTTTTGCGTG yigN 3953984 - 3955414 + | DNA recombination protein RmuC TERM 5184 3955578 - 3955591 + G 72 -2.3 -4.96646 | AGAGCAGAAAGCTGA CATGG TGGC CCACG TTTTTCATTCTGTGG ubiE 3955510 - 3956265 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 5185 3956833 - 3956817 - g 71 -4.4 -4.63218 | gap 1, opp_overlap 3956806, overlap 3956818 GTTTGCCGAAGAAAA CGCGGCT GTTG AGC-GCG CCGTAGATTCTCTGA yigP 3956275 - 3956880 + | hypothetical protein TERM 5186 3958159 - 3958169 + G 81 -8.2 -4.254 | opp_overlap 3958159 TTGATTTGTGGAAAA CGGC GAA GCCG TTTCTTGAGTCTTGG TERM 5187 3958169 - 3958159 - g 77 -8.2 -4.08767 | opp_overlap 3958159 TTGATTTGTGGAAAA CGGC GAA GCCG TTTCTTGAGTCTTGG ubiB 3956877 - 3958517 + | putative ubiquinone biosynthesis protein UbiB tatA 3958723 - 3958977 + | twin argininte translocase protein A tatB 3958981 - 3959529 + | sec-independent translocase TERM 5188 3959722 - 3959732 + G 80 -4.6 -5.04385 | overlap 3959712 3959711 TGATTGCGACGGATG TGGC GTC GCCG TTTTTTACGCCTATC tatC 3959532 - 3960311 + | TatABCE protein translocation system subunit TERM 5189 3960338 - 3960313 - f 95 -13.3 -3.94184 | opp_overlap 3960315 3960318, overlap 3960315 ACACTGAAGACTAAA CACAACCGCCC GCCA GGGCGGTTGTC ATATGGGGGCAAGCA TERM 5190 3960336 - 3960315 - f 100 -15.9 -3.55486 | opp_overlap 3960315 3960318, overlap 3960313 ACTGAAGACTAAACA CAACCGCCC GCCA GGGCGGTTG TCATATGGGGGCAAG TERM 5191 3960315 - 3960336 + F 90 -15.9 -2.62184 | opp_overlap 3960315 3960313, overlap 3960318 ACTGAAGACTAAACA CAACCGCCC GCCA GGGCGGTTG TCATATGGGGGCAAG TERM 5192 3960318 - 3960333 + F 82 -11.8 -3.46602 | opp_overlap 3960315 3960313, overlap 3960315 GAAGACTAAACACAA CCGCCC GCCA GGGCGG TTGTCATATGGGGGC tatD 3960353 - 3961135 + | DNase TatD rfaH 3961631 - 3961143 - | transcriptional activator RfaH TERM 5193 3961499 - 3961519 + g 76 -3.2 -5.02074 | overlap 3961500 GCGGTTCGCTGACGG AGGTACGT TTTCC GCGTACCA TTTTTTCCAGGGTGA TERM 5194 3961789 - 3961763 - H 75 -3 -5.13741 | overlap 3961768 CTAATTTAACAAAAA TACAGCATCC CGATGAT GAACGCCGTA TAATGATGCGCTTAC yigC 3961817 - 3963295 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 5195 3963363 - 3963345 - f 74 -6 -4.56775 | opp_overlap 3963309 ACTCGGCTTGAAAAA TGTCGG TATTGAC CCGACA CCCGACAGAGGGAGC fre 3963381 - 3964082 + | FMN reductase TERM 5196 3964092 - 3964109 + T 100 -12.7 -4.74504 | ATTTAACTATTTTAT GGGACGC AGTA GCGTCCC TTTTTACGTTAGCCT TERM 5197 3964508 - 3964543 + T 75 -11.2 -3.06915 | opp_overlap 3964493, overlap 3964494 TCGCGCCGTTAACCG CCGTTAACCGCCGTTA TTCG TAATGGCGGTTACCAG TTACGTGACGTGCAT TERM 5198 3965367 - 3965355 - T 70 -4.8 -4.49389 | ATGTGATAATGAAAA CCCT CGATC AGGG CGCAGTGTGCCTGAA TERM 5199 3965693 - 3965679 - T 87 -7.2 -5.12707 | GCAAAGGCCAAAAAA TTTCCT GCC AGGAAA GTGGCTGTGAGGGTG TERM 5200 3966210 - 3966192 - T 100 -13.1 -5.04385 | CACACGGTGAAAAAA CCCGCCC CTGAC GGGCGGG AAAAACGGCAACTAA TERM 5201 3966276 - 3966309 + T 100 -21.1 -3.09933 | TGGCTGCCTTTGTTC ACCCCGGGCACATAG TTAT CTATGTGCCCGGGGA TTCGCTCAGTTGCCG fadA 3967529 - 3966366 - | 3-ketoacyl-CoA thiolase TERM 5202 3966630 - 3966647 + g 74 -2.5 -5.00616 | opp_overlap 3966620 AAACACATCGATATC GCTGGCC GACA GTCCCGC TTTTTTCAACGCCAG TERM 5203 3967210 - 3967196 - G 70 -7 -4.1347 | CGCCAACCAGACAAA CCTGCG CAT CGCCGG TCATGATCATTCGCG fadB 3969727 - 3967550 - | multifunctional fatty acid oxidation complex subunit alpha TERM 5204 3968108 - 3968140 + g 72 -4 -4.69027 | gap 1, opp_overlap 3968104 3968101 GCCGACAACATCCAG CAGATAGGCCGGGCC CATC GGCCAG-CCGAACTG TTTTTCCATCACTTT pepQ 3969917 - 3971248 + | proline dipeptidase yigZ 3971248 - 3971862 + | hypothetical protein TERM 5205 3972140 - 3972161 + G 86 -7.9 -4.77173 | overlap 3972141 GTTCTGGACCGTGCT GGGCAGCGT GGGT GCGCTGCCG TTTATTTTCTCGGAA TERM 5206 3972141 - 3972160 + G 75 -11.4 -3.45581 | overlap 3972140 TTCTGGACCGTGCTG GGCAGCGT GGGT GCGCTGCC GTTTATTTTCTCGGA trkH 3971901 - 3973352 + | potassium transporter hemG 3973364 - 3973909 + | protoporphyrinogen oxidase TERM 5207 3974091 - 3974075 - T 76 -5.1 -4.75954 | AAAAGCGAAAATAAA CGCTTGA CTC TGAAGCG GGAAAGCGTAATATA TERM 5208 3976221 - 3976184 - T 77 -3.4 -5.14563 | opp_overlap 3976186 3976214, overlap 3976186 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 5209 3976284 - 3976260 - T 71 -8 -3.93061 | gap 1, opp_overlap 3976260 3976267, overlap 3976264 3976270 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5210 3976838 - 3976826 - T 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5211 3979463 - 3979512 + T 100 -21.1 -2.62983 | opp_overlap 3979467 3979472 3979477, overlap 3979467 3979472 3979477 GGAACTGCCAGGCAT CAAATAAAACAAAAGACCCTGTC GGAA GACAGGGCCTTTTGTTTTATCTG TGGTCTGCCGATGAG TERM 5212 3979508 - 3979467 - T 100 -22.7 -3.76224 | opp_overlap 3979463 3979467 3979472 3979477, overlap 3979472 3979477 CTGCCAGGCATCAAA TAAAACAAAAGACCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTGGTCTGCCGA TERM 5213 3979467 - 3979508 + T 100 -20.5 -2.97747 | opp_overlap 3979467 3979472 3979477, overlap 3979463 3979472 3979477 CTGCCAGGCATCAAA TAAAACAAAAGACCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTGGTCTGCCGA TERM 5214 3979503 - 3979472 - T 100 -18.2 -4.9448 | opp_overlap 3979467 3979463 3979472 3979477, overlap 3979467 3979477 AGGCATCAAATAAAA CAAAAGACCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTGGTCT TERM 5215 3979472 - 3979503 + T 100 -16 -4.63586 | opp_overlap 3979472 3979467 3979477, overlap 3979467 3979463 3979477 AGGCATCAAATAAAA CAAAAGACCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTGGTCT TERM 5216 3979498 - 3979477 - T 100 -12.3 -5.34857 | opp_overlap 3979472 3979467 3979463 3979477, overlap 3979472 3979467 TCAAATAAAACAAAA GACCCTGTC GGAA GACAGGGCC TTTTGTTTTATCTGT TERM 5217 3979477 - 3979498 + T 100 -10.1 -5.24647 | opp_overlap 3979477 3979472 3979467, overlap 3979472 3979467 3979463 TCAAATAAAACAAAA GACCCTGTC GGAA GACAGGGCC TTTTGTTTTATCTGT TERM 5218 3979563 - 3979549 - T 71 -7.8 -3.99324 | opp_overlap 3979549 CCTGAGGAGGACAAA TCCGCC GGG AGCGGA TTTGAACGTTGCGCA TERM 5219 3979646 - 3979665 + T 100 -9.2 -5.1287 | opp_overlap 3979646 CAGACAAGTGAAGAA GCCCATCC TGAC GGACGGGC TTTTTTGCGTGTGCG TERM 5220 3979665 - 3979646 - T 86 -11.4 -3.76837 | opp_overlap 3979646 CAGACAAGTGAAGAA GCCCATCC TGAC GGACGGGC TTTTTTGCGTGTGCG TERM 5221 3979730 - 3979693 - T 71 -6.9 -4.19238 | gap 1, opp_overlap 3979707 3979708, overlap 3979708 GCGGTAACTGTAAAA CCGTAGGCCTGATAAGCG CAG CGC-CATCAGGCAACCGG CACCGCCGGATGGCA TERM 5222 3979752 - 3979708 - T 79 -11.4 -3.30124 | gap 1, opp_overlap 3979707 3979708, overlap 3979693 CCGTAGGCCTGATAA GCGCAGC-GCCATCAGGCAAC CGGC ACCGCCGGATGGCAGCTTCGC CTTATCCGGCCTACA mobB 3980278 - 3979763 - | molybdopterin-guanine dinucleotide biosynthesis protein B mobA 3980859 - 3980275 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 5223 3980452 - 3980472 + g 80 -11.9 -3.37796 | opp_overlap 3980452 GGCACGATTAATCAA CGCGATCGT TGG ATGATCGCG TTCTCCATCATGAAC TERM 5224 3980472 - 3980452 - G 70 -9.7 -3.41693 | opp_overlap 3980452 GGCACGATTAATCAA CGCGATCGT TGG ATGATCGCG TTCTCCATCATGAAC yihD 3980929 - 3981198 + | hypothetical protein TERM 5225 3981807 - 3981788 - g 87 -8.6 -4.56597 | CCCTCCGGGCAAAAA GCGGCTTT CCTG AAAGCCAC TGATACTCTACTGTC yihE 3981275 - 3982261 + | serine/threonine protein kinase TERM 5226 3982392 - 3982406 + G 82 -5.6 -5.01535 | overlap 3982394 CCGGTCGCTGGCGAA CCCCAG GTA CTGGAG TTTTTCTCATTCTAC TERM 5227 3982496 - 3982481 - g 80 -4.6 -5.10208 | overlap 3982483 CAATGTGAAGAAAAA GCTGCC GGAA GGCACC AAAATGACCAAGTAC dsbA 3982278 - 3982901 + | periplasmic protein disulfide isomerase I TERM 5228 3982929 - 3982905 - T 100 -14.3 -5.8096 | opp_overlap 3982908, overlap 3982908 GATAAAAAATAAAAA GAACGCCGGTC ACT GACCGGCGTTT TTATAAGATGTTTTA TERM 5229 3982908 - 3982926 + T 100 -16 -4.87273 | opp_overlap 3982905 3982908 AAAAAATAAAAAGAA CGCCGGTC ACT GACCGGCG TTTTTATAAGATGTT TERM 5230 3982926 - 3982908 - T 100 -16 -4.8855 | opp_overlap 3982908, overlap 3982905 AAAAAATAAAAAGAA CGCCGGTC ACT GACCGGCG TTTTTATAAGATGTT yihG 3983822 - 3982914 - | putative acyltransferase TERM 5231 3986025 - 3986014 - g 83 -7.2 -4.63486 | overlap 3986015 AGCCGCTGAAGAAAA CGCC TGGC GGCG CGCCGTCAACGTCGG TERM 5232 3986738 - 3986705 - g 74 -11.5 -3.25802 | overlap 3986701 3986698 3986697 TATTAAATCCAGCAA CGCGGCGCGGCGCGC GGGG GCGGAACGCGCGGCG ATCAATGCTCCCATG polA 3984210 - 3986996 + | DNA polymerase I TERM 5233 3987220 - 3987246 + T 100 -18.1 -5.55769 | opp_overlap 3987213 GCTGAATATTTTAGC CGCCCCAGTCA GTTTA TGACTGGGGCG TTTTTTATTGTGCGC yihA 3987962 - 3987330 - | GTPase EngB TERM 5234 3987647 - 3987623 - G 71 -6.3 -4.29738 | opp_overlap 3987623 GGATATCCATTAAAA CGACTAAGCCC TGT AGGCTTTGACG TTTCTCCAGATATTC TERM 5235 3987783 - 3987811 + g 81 -2.3 -5.30155 | AATCAATTGGGTACG GCCCGGCGT TTTAGAGGTGC GCGCCAGGC TTTTTTGGTTGGTCA TERM 5236 3988333 - 3988322 - g 71 -5.8 -4.23674 | opp_overlap 3988322, overlap 3988318 TGTCAGGAAGACAAA CGTC CGGA GACG TTAGTAAAAGGAAAT SPA3843 3988202 - 3988426 + | hypothetical protein TERM 5237 3988432 - 3988485 + F 100 -19.9 -3.99405 | opp_overlap 3988448, overlap 3988448 AACCCGTTAAGGGTC GTGAGTCAAGAAAAAAGGCGGCAGA TTAC TCTGTCGCCTTTTTTCTTTGCTTGC TTTCTGCTAGATTCC TERM 5238 3988469 - 3988448 - f 100 -10.1 -5.4833 | opp_overlap 3988432 3988448 TGAGTCAAGAAAAAA GGCGGCAGA TTAC TCTGTCGCC TTTTTTCTTTGCTTG TERM 5239 3988448 - 3988469 + F 100 -12.3 -5.72053 | opp_overlap 3988448, overlap 3988432 TGAGTCAAGAAAAAA GGCGGCAGA TTAC TCTGTCGCC TTTTTTCTTTGCTTG yihI 3988545 - 3989048 + | hypothetical protein hemN 3989237 - 3990610 + | coproporphyrinogen III oxidase glnG 3992331 - 3990922 - | nitrogen regulation protein NR(I) TERM 5240 3991379 - 3991361 - G 80 -4.4 -5.03314 | opp_overlap 3991361, overlap 3991363 GCGACCTGCAAAAAA TGGCGCGC CAG GCGCGGAA TATCCTCACGGCGCT glnL 3993389 - 3992340 - | nitrogen regulation protein NR(II) TERM 5241 3992748 - 3992732 - G 70 -10.1 -3.31322 | opp_overlap 3992730 CGTAATCGCGGATAA GCCGGAC ATT ATCCGGC AGTTCCATCGACACC TERM 5242 3992935 - 3992961 + g 80 -4.9 -5.01811 | overlap 3992936 TTGCTGAGTAGCTGC GCCGCGCCGCG CAGGC CGCCGAGCGGA TTTTTGATTTCGTGC TERM 5243 3993502 - 3993485 - R 100 -11.3 -5.24129 | TTGGTGGAGAAAAAA GCCCATC CTGG GATGGGC TGAAAGTTTCCACGG glnA 3995073 - 3993664 - | glutamine synthetase TERM 5244 3994286 - 3994296 + g 70 -6.8 -4.13945 | CCGGAACCGTTATCG CCGA ACA TCGG TTTTGGCATAAAGGT SPA3849 3995477 - 3995052 - | putative cytoplasmic protein TERM 5245 3995287 - 3995259 - GH 72 -6.2 -4.2558 | gap 1, opp_overlap 3995243 3995250, overlap 3995261 3995282 TATGTTGCACCAAAA TAGTGCTTCAATG TGAA CATT-AAGCACCA CATTGGTGCAATAGA TERM 5246 3995296 - 3995282 - GH 73 -10 -3.37959 | overlap 3995261 3995259 CAATGTGAACATTAA GCACCA CAT TGGTGC AATAGAACGCAAGCC typA 3995449 - 3997272 + | GTP-binding protein TERM 5247 3997321 - 3997295 - TR 88 -8.6 -4.87665 | opp_overlap 3997295 TCTTACGGATAAAAA CCCTGCCGAAAT GAA AACTCGGCGGGG TTTTTTTATTCACGT TERM 5248 3997295 - 3997321 + Tr 100 -8.7 -5.80364 | opp_overlap 3997295 TCTTACGGATAAAAA CCCTGCCGA AATGAAAAC TCGGCGGGG TTTTTTTATTCACGT SPA3851 3998061 - 3997327 - | hypothetical protein SPA3852 3998924 - 3998046 - | hypothetical protein TERM 5249 3998250 - 3998234 - G 75 -3.6 -4.94972 | overlap 3998227 TATGACAAGCAAAAA GATCGC CTTCT GCGTTC ATAAAAATACTTTTT TERM 5250 3998793 - 3998807 + g 100 -9.2 -5.37345 | opp_overlap 3998783, overlap 3998782 AACCATGCGCCATAG CGCGGC TTC GTCGCG TTTTTTATCGTTGCG SPA3853 4000162 - 3998921 - | coproporphyrinogen III oxidase SPA3854 4001039 - 4000164 - | hypothetical protein TERM 5251 4000448 - 4000483 + g 70 -5.4 -4.45485 | gap 1, opp_overlap 4000448 CGATATTGATATACA TCATGACCGGTTG-GCT GCC AGCACGCTCGGCCATGA TTTTCTGGATATAAT TERM 5252 4000633 - 4000657 + g 72 -2.1 -4.91459 | opp_overlap 4000627 CCGCCAATACAGATG GTCTGGTAG CCTTTAT TTTCCAGAC TTTTTATCCATGTTG SPA3855 4001640 - 4001032 - | hypothetical protein TERM 5253 4001720 - 4001730 + r 87 -6.8 -5.24129 | opp_overlap 4001716, overlap 4001710 TGTTCCAGTAAGCGC CGCT TGC AGCG TTTTTTATCCAACAG TERM 5254 4001825 - 4001813 - R 74 -3.4 -5.00884 | ATGTTCTGCAAAAAA TGGA TATAG TCCA GACCGATCGCGTTTA SPA3856 4002918 - 4002070 - | hypothetical protein TERM 5255 4003040 - 4003020 - R 72 -10.4 -2.80195 | opp_overlap 4003020, overlap 4003017 ATTCAGGATGAATGA GCGGGCAG AACAA CTACCCGC TGTGATGCAGATTCG yshA 4003767 - 4003075 - | outer membrane porin L yihO 4005256 - 4003835 - | putative membrane permease TERM 5256 4005267 - 4005290 + r 78 -5.2 -5.00467 | opp_overlap 4005272, overlap 4005272 GACATAATCGCCTCT CAAAACGCCC CGCA GGGCGTTATA TTTTATTGTTGTTAA TERM 5257 4005285 - 4005272 - R 83 -9.5 -4.08064 | opp_overlap 4005267 4005272 AATCGCCTCTCAAAA CGCCC CGCA GGGCG TTATATTTTATTGTT TERM 5258 4005272 - 4005285 + r 83 -9.5 -4.12416 | opp_overlap 4005272, overlap 4005267 AATCGCCTCTCAAAA CGCCC CGCA GGGCG TTATATTTTATTGTT yihP 4006684 - 4005302 - | putative membrane permease TERM 5259 4006318 - 4006332 + g 71 -4.2 -4.62336 | opp_overlap 4006316 4006318 4006313, overlap 4006319 ACAGCATAAACAGCA TCGTTG CGA CGACGG TTTTTCCCGTCACCT TERM 5260 4006695 - 4006727 + r 71 -9.8 -3.1577 | gap 1, overlap 4006693 4006697 CTCATTATTCTTCTC CATCT-GCCCGCAGG TTTC CCTGCGGGCGAGCCG TATTAGATATTCCGT yihQ 4008766 - 4006730 - | alpha-glucosidase TERM 5261 4006766 - 4006756 - G 76 -3.2 -5.04356 | GTAAAGAAGCAAAAA GTGA AGC CCAC TCGCTCTTCGCGCGA TERM 5262 4007500 - 4007513 + g 70 -9.5 -3.31461 | CGTTATGCATGATCT CGGCG CTGA CGCCG TTGTGCAGATACGTG TERM 5263 4008241 - 4008251 + g 95 -8.2 -4.89521 | overlap 4008239 AGGTCCAGTAATAGT CGCC GCC GGCG TTTTCTTTACAGTCT yihR 4009667 - 4008810 - | hypothetical protein TERM 5264 4009356 - 4009328 - G 72 -3.8 -4.83169 | gap 1, overlap 4009314 4009330 AGGGCGGCAGAAAAA TC-GTTAGCGACG CTTC CGCCGCCGACTGA TAATTAATCTGCCAG yihS 4010912 - 4009671 - | putative isomerase yihT 4011806 - 4010928 - | putative aldolase TERM 5265 4011617 - 4011603 - G 74 -10 -3.7511 | CTGGCGATAACAGAA CTGCTG ATC CAGCAG AACGGCAGAGGCATA yihU 4012725 - 4011829 - | putative oxidoreductase yihV 4012880 - 4013776 + | putative sugar kinase TERM 5266 4014081 - 4014062 - g 89 -3.4 -5.48063 | ACGCAAGAGAAAAAA GCCATTGC GGAA GCCGTGGC TGACTATATTCCGGA yihW 4013810 - 4014613 + | DeoR family transcriptional regulator TERM 5267 4014677 - 4014703 + F 79 -8 -4.3821 | overlap 4014678 AAAACGGCGCTGTGA TGCAGGCGATAT TGA ACATCGTCTGCG TTTCTATTGTCTTTT yihX 4014804 - 4015403 + | phosphatase TERM 5268 4016547 - 4016574 + G 71 -7.6 -4.01564 | gap 1 CCAAGCTTTTCCGGC GGGGCTGCGC-CG GAT CGCGCGCAGGCGC TTTATGAATATTTTG yihZ 4016262 - 4016699 + | D-tyrosyl-tRNA deacylase yiiD 4016696 - 4017685 + | putative acetyltransferase ygjM 4018146 - 4017700 - | hypothetical protein TERM 5269 4017879 - 4017890 + gT 79 -7.2 -4.39828 | opp_overlap 4017873 4017879, overlap 4017879 TTCGCAATACTGAAA CGCC AGGG GGCG TTTTCTCCAGGTGTT TERM 5270 4018059 - 4018073 + gT 75 -5.7 -4.58395 | overlap 4018058 4018055 CATTTCGGTCTTCCC CCATC AGTGG GATGG TTTTTACCGCATCGC ygjN 4018453 - 4018097 - | hypothetical protein TERM 5271 4018527 - 4018473 - R 84 -10.2 -3.96624 | opp_overlap 4018472 TAGTTCCATTACAAA GTTTTCAACCTGAAAACAATTTAGCG CAA CGTTATCCAGTTTTCAAGTTGAAAAC AAAATTGAATTTTAG SPA3873 4019468 - 4018539 - | putative lipase TERM 5272 4019485 - 4019500 + H 75 -6.2 -4.43501 | TTTCATTGCCTTTAT CTGTAT GGAT ATACAG TTTTATAACTCGATT yiiF 4019673 - 4019915 + | CopG family DNA-binding protein SPA3875 4019915 - 4020289 + | hypothetical protein fdhE 4021256 - 4020327 - | formate dehydrogenase accessory protein FdhE TERM 5273 4021204 - 4021185 - G 83 -10.7 -3.9461 | opp_overlap 4021182 4021185 TCGGGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG fdoI 4021888 - 4021253 - | formate dehydrogenase-O subunit gamma fdoH 4022787 - 4021885 - | formate dehydrogenase-O beta subunit TERM 5274 4022578 - 4022602 + g 74 -9.9 -3.63569 | TTTCGCAGTTAAGTC CGCCGGGTTGT CAT ACACCCCGACG TTATTGCCCACTTCA TERM 5275 4023646 - 4023631 - H 79 -9 -4.09864 | overlap 4023635 AGCTACCGGCGAAAA TCCAGC AGCC GCTGGA CGTCGTACCGTCATC TERM 5276 4025047 - 4025037 - H 71 -6.8 -4.03413 | overlap 4025038 ATTGGCGCATAGAAA TCGG CCA CCGA CGCGGTACGCGTGAA TERM 5277 4026380 - 4026367 - g 71 -9.5 -3.53811 | opp_overlap 4026376 TTTATGGGGCTGAAA GCGCG TCGT CGCGC GCTGGCCGGACGCAC fdhD 4026040 - 4026876 + | formate dehydrogenase accessory protein TERM 5278 4027056 - 4027070 + T 70 -9.2 -3.35597 | opp_overlap 4027056, overlap 4027054 CTTCGAACGAAAAAA GCGCCT CTG GGGCGC TCTTTCGACAGTCGC TERM 5279 4027070 - 4027056 - T 100 -8.5 -5.26875 | opp_overlap 4027056 4027054 CTTCGAACGAAAAAA GCGCC TCTGG GGCGC TCTTTCGACAGTCGC SPA3881 4028175 - 4027144 - | putative lipoprotein TERM 5280 4028494 - 4028442 - g 84 -9.1 -4.24726 | gap 2, opp_overlap 4028442 4028449, overlap 4028446 ACAATAATGTTAAAA CCGAGGCGACGCCGGCCGCCAGCAG TCAGC CTGC-GACG-CCAGCGCCTTCTCAG ACGCCGGAAACGCAA TERM 5281 4028481 - 4028446 - g 79 -13.8 -2.76291 | opp_overlap 4028442 4028449, overlap 4028442 TAATGTTAAAACCGA GGCGACGCCGGCCGCC AGCA GTCAGCCTGCGACGCC AGCGCCTTCTCAGAC TERM 5282 4029377 - 4029356 - g 71 -4.3 -4.65933 | overlap 4029357 4029358 GATTTTGAAAAGAAA CGGGTGCAG GACC CTGCAACAG GATGGATGGTTGCGG yiiG 4028357 - 4029457 + | putative lipoprotein TERM 5283 4029542 - 4029528 - T 100 -8.5 -5.10208 | opp_overlap 4029528 TAACGCCAATAAAAA GCGCC GATCA GGCGC TTTTTTCGTTCATGT TERM 5284 4029528 - 4029542 + T 100 -8.5 -5.31059 | opp_overlap 4029528 TAACGCCAATAAAAA GCGCC GATCA GGCGC TTTTTTCGTTCATGT TERM 5285 4029638 - 4029627 - T 70 -2.2 -4.9218 | GAGCTATTAGAAAAA CCAG TAAT CTGA AGCTATCACAAGATG SPA3883 4030136 - 4029813 - | putative inner membrane protein SPA3884 4030795 - 4030136 - | hypothetical protein TERM 5286 4031133 - 4031116 - g 79 -3.3 -5.28176 | gap 1 CGCAGGTACAAAAAA CGCAGGTG ATT CGCC-GCG GAGAAGGCACCAAAG SPA3885 4030878 - 4031444 + | putative DNA-binding protein TERM 5287 4031531 - 4031495 - T 100 -9.4 -5.49579 | gap 1, overlap 4031496 CGACAAAAAATAAAA CCGTAGGCCCGGTAAGC TTGC GCC-ACCGGGCACACGA CTTACTGCAGATAGA TERM 5288 4031530 - 4031496 - T 84 -10.7 -3.87307 | gap 1, overlap 4031495 GACAAAAAATAAAAC CGTAGGCCCGGTAAGC TTGC GCC-ACCGGGCACACG ACTTACTGCAGATAG yiiL 4031847 - 4031533 - | hypothetical protein SPA3887 4032992 - 4031844 - | alcohol dehydrogenase rhaD 4033946 - 4033119 - | rhamnulose-1-phosphate aldolase TERM 5289 4034054 - 4034003 - R 90 -13.8 -3.30243 | opp_overlap 4033989 4033987 4034003 4034000 4034048, overlap 4034004 ACGTAGGCCGGATAA GCGCAGCGCCATCCGGCAAT CGTGTTTCATTT ATTGCCGGATGGCGACGCGG GCGTCTTATCCGGCC TERM 5290 4034053 - 4034004 - R 100 -17.3 -2.57931 | opp_overlap 4033989 4033987 4034003 4034000 4034048, overlap 4034003 CGTAGGCCGGATAAG CGCAGCGCCATCCGGCAAT CGTGTTTCATTT ATTGCCGGATGGCGACGCG GGCGTCTTATCCGGC rhaA 4035348 - 4034089 - | L-rhamnose isomerase TERM 5291 4034296 - 4034307 + g 100 -7.2 -5.27779 | opp_overlap 4034294, overlap 4034294 GGGTTCCAGCAGAGC GCGC AGCA GCGC TTTTTTCATGTTGCG TERM 5292 4034973 - 4034945 - G 91 -7.3 -4.91511 | opp_overlap 4034945, overlap 4034960 4034961 AGTGGATGAGAAAAA CAGGTGGGGTTGA AAT CCAGCCCCAGCCG GTTCGCTTTCGCCCA rhaB 4036814 - 4035345 - | rhamnulokinase rhaS 4037102 - 4037938 + | transcriptional activator RhaS rhaR 4038091 - 4038939 + | transcriptional activator RhaR rhaT 4039970 - 4038936 - | rhamnose-proton symporter TERM 5293 4039561 - 4039550 - G 75 -3.6 -4.84359 | TCAGCGCGACAAAAA CGCC AAGT AGCG TCATGCGTCCCCCTT TERM 5294 4040603 - 4040613 + G 76 -5.4 -4.78753 | overlap 4040605 AATGGATTCTGTTAT GAGA AAA TCTC TTTTCTTACTATTAC SPA3894 4040601 - 4041272 + | hypothetical protein TERM 5295 4041305 - 4041327 + T 100 -14.2 -5.82316 | TATTTATTCCCTTTT CCGGCTACTT TAT AGGTAGCCGG TTTTTTTTACCTGGT SPA3895 4042736 - 4041429 - | integral membrane transport protein SPA3896 4043244 - 4042729 - | membrane transporter SPA3897 4044246 - 4043263 - | putative dicarboxylate-binding periplasmic protein TERM 5296 4043293 - 4043314 + g 75 -5.8 -4.57569 | opp_overlap 4043295 CTGGATACGTTGATA CAGGCCGT AAAGCC GCGGCTTG TTTTTCAGGCCGTCG sodA 4044575 - 4045195 + | superoxide dismutase TERM 5297 4045218 - 4045235 + F 100 -11.3 -5.71712 | opp_overlap 4045218 TGCACGTCTGTAGAA GCGAGTC TGAT GACTCGC TTTTTTTGTATCCGC TERM 5298 4045235 - 4045218 - f 77 -11.3 -3.29511 | opp_overlap 4045218 TGCACGTCTGTAGAA GCGAGTC TGAT GACTCGC TTTTTTTGTATCCGC yiiM 4045265 - 4045954 + | hypothetical protein SPA3900 4045966 - 4046361 + | hypothetical protein TERM 5299 4046381 - 4046408 + T 100 -9.8 -4.75776 | opp_overlap 4046384, overlap 4046382 4046384 CGACGGCGAGATAAA AAATCGGCCTGC ATTC GCAGGCCGATGG TTTTTAGGTTCGCTT TERM 5300 4046382 - 4046407 + T 86 -13.3 -3.44381 | opp_overlap 4046384, overlap 4046381 4046384 GACGGCGAGATAAAA AATCGGCCTGC ATTC GCAGGCCGATG GTTTTTAGGTTCGCT TERM 5301 4046384 - 4046405 + T 100 -15.9 -3.28592 | opp_overlap 4046384, overlap 4046382 4046381 CGGCGAGATAAAAAA TCGGCCTGC ATTC GCAGGCCGA TGGTTTTTAGGTTCG TERM 5302 4046405 - 4046384 - T 100 -15.9 -5.36441 | opp_overlap 4046384 4046382 4046381 CGGCGAGATAAAAAA TCGGCCTGC ATTC GCAGGCCGA TGGTTTTTAGGTTCG cpxA 4047785 - 4046412 - | two-component sensor protein TERM 5303 4046727 - 4046742 + g 76 -10.4 -3.76125 | AACAATATTTTCCAG CGCGCT TTCC AGCGCG TTTGGGTTGCCATAG TERM 5304 4046868 - 4046883 + g 79 -3.2 -5.1485 | overlap 4046870 ATTGGCTTTCATCGT TTCGCT GACC AGCGCA TTTTTCTGTTGGTTA cpxR 4048480 - 4047782 - | DNA-binding transcriptional regulator CpxR TERM 5305 4048667 - 4048677 + G 76 -3.2 -5.00616 | GTTATGGCCTCAACG CTGG CAT TCAG TTTTTTAAGCCACGC TERM 5306 4048918 - 4048908 - g 71 -8.2 -3.79623 | AAAAATTTGATGAAA GCGC TGT GCGC GCTCAGGCAGAAAAA cpxP 4048631 - 4049131 + | periplasmic repressor CpxP TERM 5307 4049171 - 4049189 + F 100 -14.6 -6.30182 | CACCATCCCTGTCTT CCCCCACA TGA TGTGGGGG TTTTTTTTTATCTCC fieF 4049280 - 4050182 + | ferrous iron efflux protein F pfkA 4050367 - 4051329 + | 6-phosphofructokinase sbp 4051533 - 4052522 + | sulfate transporter subunit TERM 5308 4052535 - 4052559 + F 100 -15.1 -5.63517 | opp_overlap 4052535 TAAACCGTTTATAAA CCCGGTAACGT ATT ATGTTACCGGG TTTTTTCTTTGCCAC TERM 5309 4052559 - 4052535 - f 95 -12.9 -3.88583 | opp_overlap 4052535 TAAACCGTTTATAAA CCCGGTAACGT ATT ATGTTACCGGG TTTTTTCTTTGCCAC cdh 4052623 - 4053378 + | CDP-diacylglycerol pyrophosphatase TERM 5310 4053414 - 4053442 + F 81 -13.3 -2.72799 | overlap 4053410 CATTATCTTATTGAT TCTTATCCCGGTT TAA AACTGGGGTAAGA TCGTGTCTATAAAAA TERM 5311 4053516 - 4053458 - f 73 -4.4 -4.82901 | gap 3, opp_overlap 4053468 4053471 4053477, overlap 4053467 4053468 4053471 4053477 TCGTGTCTATAAAAA TATGTGAAACCGATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGAT-GGTT-CGT-TA CACTCTCTTCATAGC TERM 5312 4053509 - 4053467 - f 100 -17.5 -3.73294 | gap 1, opp_overlap 4053468 4053471 4053477, overlap 4053458 4053468 4053471 4053477 TAAAAATATGTGAAA CCGATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGAT-GG TTCGTTACACTCTCT TERM 5313 4053509 - 4053468 - f 100 -17.7 -2.82892 | opp_overlap 4053468 4053471 4053477, overlap 4053467 4053458 4053471 4053477 AAAAATATGTGAAAC CGATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGG TTCGTTACACTCTCT TERM 5314 4053468 - 4053509 + F 100 -17.7 -3.37053 | opp_overlap 4053467 4053468 4053458 4053471 4053477, overlap 4053471 4053477 AAAAATATGTGAAAC CGATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGG TTCGTTACACTCTCT TERM 5315 4053471 - 4053506 + F 100 -18 -2.84574 | opp_overlap 4053471 4053467 4053468 4053458 4053477, overlap 4053468 4053477 AATATGTGAAACCGA TCAAAAGATATAAAGG TATA CCTTTATATCTTTTGA TGGTTCGTTACACTC TERM 5316 4053506 - 4053471 - f 100 -18 -2.66098 | opp_overlap 4053468 4053471 4053477, overlap 4053467 4053468 4053458 4053477 AATATGTGAAACCGA TCAAAAGATATAAAGG TATA CCTTTATATCTTTTGA TGGTTCGTTACACTC TERM 5317 4053500 - 4053477 - f 91 -11.2 -4.33165 | opp_overlap 4053471 4053468 4053477, overlap 4053471 4053467 4053468 4053458 TGAAACCGATCAAAA GATATAAAGG TATA CCTTTATATC TTTTGATGGTTCGTT TERM 5318 4053477 - 4053500 + F 91 -11.2 -4.37013 | opp_overlap 4053477 4053471 4053467 4053468 4053458, overlap 4053471 4053468 TGAAACCGATCAAAA GATATAAAGG TATA CCTTTATATC TTTTGATGGTTCGTT TERM 5319 4055170 - 4055180 + G 70 -6.8 -4.09685 | TGACGCCGGTCGCTT CCTG CGC CAGG TTTTCCAGGATAACG SPA3909 4054988 - 4055947 + | aminoimidazole riboside kinase SPA3910 4055957 - 4056997 + | hypothetical protein TERM 5320 4057403 - 4057382 - g 81 -12.3 -3.55563 | gap 1 ACCGTATTCTGGAAA TCGCGC-CGC GCC GCGCGCGCGA CGCTCAGGCAGACGG SPA3911 4057051 - 4057782 + | GntR family regulatory protein SPA3912 4057880 - 4058050 + | hypothetical protein SPA3913 4058066 - 4058197 + | CDP-diacylglycerol phosphotidylhydrolase paralog SPA3914 4058637 - 4058287 - | hypothetical protein ydeV 4060243 - 4058651 - | autoinducer-2 (AI-2) kinase TERM 5321 4060040 - 4060058 + g 89 -8.9 -4.57569 | opp_overlap 4060040 4060051 TGCCTGACGGATACA CTGGCAA GCCAG TTGCCAG TTTTTGGCAAGATCA TERM 5322 4060116 - 4060089 - G 76 -12.8 -2.7556 | gap 1, overlap 4060086 4060077 AACTCCATCGAACCA GGCA-CATCCGGC ACG GCCAGATGCTGCC ATTCCGCTTGATCGA ydeW 4061291 - 4060332 - | putative regulatory protein ego 4061547 - 4063082 + | putative ABC transporter ATP-binding protein ydeY 4063076 - 4064119 + | putative ABC transporter permease protein ydeZ 4064119 - 4065117 + | putative ABC transporter, membrane component TERM 5323 4065244 - 4065265 + G 74 -2.1 -5.00616 | overlap 4065245 GCGGATTGCTTTTAT TCCCAAGCT GGTT GGCGTGGGC TTTTTTACCAGCGGC TERM 5324 4065618 - 4065596 - g 73 -9.2 -3.88291 | opp_overlap 4065598 4065602, overlap 4065598 4065602 CATCAGGTGGACAAA GAGAAAGCGA AAG TCGCTTTCTT CTATTCCAGCCCAAC TERM 5325 4065598 - 4065616 + G 83 -11.8 -3.65812 | opp_overlap 4065598 4065596 4065602, overlap 4065602 TCAGGTGGACAAAGA GAAAGCGA AAG TCGCTTTC TTCTATTCCAGCCCA TERM 5326 4065616 - 4065598 - g 81 -11.8 -3.52906 | opp_overlap 4065598 4065602, overlap 4065596 4065602 TCAGGTGGACAAAGA GAAAGCGA AAG TCGCTTTC TTCTATTCCAGCCCA TERM 5327 4065602 - 4065612 + G 75 -6.8 -4.46073 | opp_overlap 4065598 4065596 4065602, overlap 4065598 GTGGACAAAGAGAAA GCGA AAG TCGC TTTCTTCTATTCCAG TERM 5328 4065612 - 4065602 - g 75 -6.8 -4.40003 | opp_overlap 4065602 4065598, overlap 4065598 4065596 GTGGACAAAGAGAAA GCGA AAG TCGC TTTCTTCTATTCCAG yneA 4065146 - 4066168 + | putative ABC transport protein, solute-binding component yneB 4066197 - 4067072 + | aldolase yneC 4067116 - 4067445 + | autoinducer-2 (AI-2) modifying protein LsrG SPA3923 4067455 - 4068219 + | ribulose-phosphate 3-epimerase tpiA 4069078 - 4068311 - | triosephosphate isomerase yiiQ 4069787 - 4069191 - | hypothetical protein fpr 4071171 - 4070425 - | ferredoxin-NADP reductase TERM 5329 4071247 - 4071226 - R 73 -10.9 -2.74122 | overlap 4071225 4071223 CGTCAGGAGAAAGAT TTCCAGCCC CGCG AGGCTGGAA GGCTCTAACTAACAA glpX 4072278 - 4071268 - | fructose 1,6-bisphosphatase II TERM 5330 4071530 - 4071544 + g 74 -4.9 -4.70169 | overlap 4071531 4071538 CGCGCCAGTTCCTGT TCGCC AATGC GGCGG TTTTCTTCGCTGTCG TERM 5331 4072171 - 4072189 + g 72 -3.7 -4.83169 | opp_overlap 4072157, overlap 4072173 ACGCATGGCGTTGAC CGCCGCG CCGTC CGCGGTA TTTTTATCGCCGCGT TERM 5332 4072173 - 4072187 + g 74 -8.5 -4.03995 | opp_overlap 4072157, overlap 4072171 GCATGGCGTTGACCG CCGCG CCGTC CGCGG TATTTTTATCGCCGC TERM 5333 4072342 - 4072371 + r 79 -9.3 -4.09685 | opp_overlap 4072339 4072342, overlap 4072354 GGAGGGAATAATTGA TGTGTGTGCGGAG TTGC CTCCGCACAAAGA TTTTGCCGGATGGCG glpK 4073898 - 4072390 - | glycerol kinase glpF 4074764 - 4073919 - | glycerol uptake facilitator protein TERM 5334 4074924 - 4074937 + H 70 -9.5 -3.04398 | opp_overlap 4074914, overlap 4074923 AAAATGAGCGTTATC GCGCC ATGA GGCGC ATTTTGAGACAGCAG yiiU 4075163 - 4075402 + | hypothetical protein TERM 5335 4075622 - 4075593 - T 83 -13.7 -2.60808 | opp_overlap 4075600, overlap 4075600 ATCAGCGACAACGCA TAAAAAAGGCGCC TTAC GGCGCCTTTTTTG ATCACTCGATATCAA TERM 5336 4075615 - 4075600 - T 100 -11.8 -5.3236 | opp_overlap 4075600, overlap 4075593 ACAACGCATAAAAAA GGCGCC TTAC GGCGCC TTTTTTGATCACTCG TERM 5337 4075600 - 4075615 + T 100 -11.8 -5.1675 | opp_overlap 4075600 4075593 ACAACGCATAAAAAA GGCGCC TTAC GGCGCC TTTTTTGATCACTCG menG 4076109 - 4075624 - | ribonuclease activity regulator protein RraA menA 4077131 - 4076202 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 5338 4077167 - 4077150 - R 100 -11.3 -5.07486 | opp_overlap 4077137 TAGCGCCAATAAAAA TGGGGCT TTTC AGCCCCA TCAACAGTGATGAAA hslU 4078529 - 4077198 - | ATP-dependent protease ATP-binding subunit TERM 5339 4078028 - 4078044 + g 71 -4.4 -4.57341 | gap 1 TCTCTTTATCGTCGA GCTG-GC CTTC GCGCAGC TTTTTGCGGAACGTT TERM 5340 4078160 - 4078173 + g 80 -5.2 -4.87665 | CTTCCGCCAACTCTT CCGC ACGATA GCGG TTTTTCTCGATAGCC hslV 4079069 - 4078539 - | ATP-dependent protease peptidase subunit ftsN 4080132 - 4079161 - | essential cell division protein TERM 5341 4079223 - 4079233 + g 74 -3.2 -4.96468 | TCAGACGGTTAATGG TGCT GTC GGCA TTTTCTTTACCTTTC TERM 5342 4079423 - 4079445 + g 70 -6.8 -4.11216 | overlap 4079439 GCCTTCGGCGCTTCA GGCGCGCGCG TAA TGGGCGCGGC TTTTGGCGCTGCCGC TERM 5343 4079639 - 4079669 + g 82 -11 -3.77607 | overlap 4079640 TGCGTTTGAGCCCAC TGCTGCTGCGCCTG ACG CTGGCGCTGTAGCG TTTGCTGGCGTTGTT TERM 5344 4079640 - 4079668 + g 75 -12.3 -2.85841 | overlap 4079639 GCGTTTGAGCCCACT GCTGCTGCGCCTG ACG CTGGCGCTGTAGC GTTTGCTGGCGTTGT cytR 4081251 - 4080226 - | DNA-binding transcriptional regulator CytR TERM 5345 4080367 - 4080353 - G 80 -9.2 -4.20696 | opp_overlap 4080352 4080353 CGACCAATGTCAAAA CGCGGC TGC GCCACG GTTGTCAACGGAGGG priA 4083604 - 4081406 - | primosome assembly protein PriA TERM 5346 4082711 - 4082723 + g 74 -4.7 -4.81249 | opp_overlap 4082684 4082711 CGTGCCGATGACAAT CGCCG CTT CGCCG TTTTTCGCTTTCAGC TERM 5347 4083893 - 4083878 - g 71 -6.1 -4.28361 | GTAATGTTATCAAAA CCCAC TCTACC GTGGG TCACGACCTGAACCT rpmE 4083808 - 4084020 + | 50S ribosomal protein L31 TERM 5348 4084031 - 4084060 + T 100 -12.3 -4.38712 | opp_overlap 4084039, overlap 4084039 4084059 AATAAGTTACCGCCA GAAAAAAAGCGCC GCAG GGCGCTTTTTTTG TTTTCTAGGGATAAC TERM 5349 4084039 - 4084052 + T 100 -9.5 -6.14618 | opp_overlap 4084039, overlap 4084031 ACCGCCAGAAAAAAA GCGCC GCAG GGCGC TTTTTTTGTTTTCTA TERM 5350 4084052 - 4084039 - T 100 -9.5 -5.61596 | opp_overlap 4084039 4084031 ACCGCCAGAAAAAAA GCGCC GCAG GGCGC TTTTTTTGTTTTCTA SPA3940 4084727 - 4084065 - | hypothetical protein TERM 5351 4084883 - 4084906 + r 100 -16.8 -4.71222 | opp_overlap 4084881 TACGTTTTAACCATT CAGGCGGAAG TTGG CTTCCGCCTG TTTTACTTTTACTCT SPA3941 4086718 - 4084928 - | hypothetical protein TERM 5352 4085838 - 4085855 + g 74 -2.1 -5.07652 | gap 1, overlap 4085830 4085841 GTATTGATGGTGTAT TTA-CCAT TTA ATGGATAA TTTTCTTTTGCGACA TERM 5353 4086566 - 4086550 - G 80 -9.3 -4.19238 | CTGTTAATGGGAAAA CGCCGCC GTA GGGGGCG ACATCGACCATACCT TERM 5354 4087164 - 4087138 - R 83 -6.5 -5.07107 | opp_overlap 4087138 4087139, overlap 4087139 4087140 GAAATCGTTAAAAAA GCGCGGCCAGA GGCGT TCTGACCGCAT GCTTTGTTATCAGTA TERM 5355 4087163 - 4087139 - R 75 -10 -3.6318 | opp_overlap 4087139 4087138, overlap 4087138 4087140 AAATCGTTAAAAAAG CGCGGCCAGA GGCGT TCTGACCGCA TGCTTTGTTATCAGT TERM 5356 4087162 - 4087140 - R 74 -11.3 -2.76823 | opp_overlap 4087139 4087138, overlap 4087139 4087138 AATCGTTAAAAAAGC GCGGCCAGA GGCGT TCTGACCGC ATGCTTTGTTATCAG metJ 4087491 - 4087174 - | transcriptional repressor protein MetJ metB 4087756 - 4088916 + | cystathionine gamma-synthase TERM 5357 4089962 - 4089945 - g 81 -8.3 -4.25074 | GACCAAATTTTAAAA CGGGCGC AGGC GCGTCCG CTGGCGGTGGGCGTG metL 4088919 - 4091351 + | bifunctional aspartate kinase II/homoserine dehydrogenase II SPA3945 4092324 - 4091467 - | putative inner membrane protein SPA3946 4094684 - 4093560 - | hypothetical protein TERM 5358 4093697 - 4093683 - G 77 -8.5 -4.2123 | TAGCCAGGTAACAAA GCGGC GACTG GCCGC CAGATTAACGGCGAC TERM 5359 4094990 - 4094961 - g 74 -10.8 -3.60098 | overlap 4094962 ATTGCTGACGGTAAA CGCGATATTGGC GGTTGG GCCAATATCGCT ACGCTGGTGAAGCAG TERM 5360 4094989 - 4094962 - g 83 -14.3 -2.75844 | overlap 4094961 TTGCTGACGGTAAAC GCGATATTGGC GGTTGG GCCAATATCGC TACGCTGGTGAAGCA TERM 5361 4095795 - 4095779 - g 77 -3.6 -5.06414 | CGGCTGGAACAAAAA GCTCGA TAAAG TCGTGC AGCAAACGGTGGCGC TERM 5362 4095867 - 4095882 + G 87 -8.2 -4.56597 | overlap 4095841 TCGCTGGGGAATCTG GCGGCG GATG CGCTGC TTTTTACGGCGGGGA SPA3947 4094820 - 4096376 + | hypothetical protein TERM 5363 4096413 - 4096444 + TF 74 -10.9 -2.77899 | overlap 4096410 ATGGCCTTTAGCGCA TTCAGGCCGGACG GCGGTA TGTCTGGCCTGGA TCATTCGTGGACCGC TERM 5364 4096857 - 4096882 + TF 74 -10.3 -3.18274 | opp_overlap 4096856 4096855, overlap 4096841 ATGCTGGCGATAACC CGCGCGCAGCA ACTT TTCGGCGCGCG TTACGTTAACGTGCA TERM 5365 4097388 - 4097406 + TF 74 -10.2 -3.17219 | CAGCGCCATCTTTCC CGGCTTGC AGG GCGGGCCG TTGATGCACGTTATC TERM 5366 4097458 - 4097431 - Tf 75 -9.8 -3.53811 | opp_overlap 4097430 4097427 4097426 GTTATCGCGGCTAAA GCGGTGGCGCTT GGCG AAGCGCTACAGC CTGAATTTAAACGTT TERM 5367 4097981 - 4097956 - gT 71 -7.4 -3.86944 | TTGACAATTATCAAA CGCTGGCGCG CCATGT CGCCCCCGCG CAATGCGGCGCAGTA TERM 5368 4098148 - 4098171 + GT 74 -7.4 -4.15044 | gap 1, opp_overlap 4098113 TGGTGTTGCTTAATG GCGTCAT-GCC GCA GGCGATGCCGC TTTGTTGCGCGCAAC TERM 5369 4098324 - 4098339 + GT 75 -6 -4.57073 | opp_overlap 4098321, overlap 4098325 ACGCCGGAGCAACTG GCGCGG CTGG CCGCGA TTTTTCGCCAGCGTG TERM 5370 4098325 - 4098338 + GT 73 -9.5 -3.33922 | opp_overlap 4098321, overlap 4098324 CGCCGGAGCAACTGG CGCGG CTGG CCGCG ATTTTTCGCCAGCGT SPA3950 4100409 - 4098928 - | GntR family regulatory protein SPA3949 4097877 - 4098983 + | alanine racemase TERM 5371 4099041 - 4099079 + gF 79 -11 -3.34398 | gap 1, opp_overlap 4099029, overlap 4099036 4099042 ACAGCCAGCCCGTGG GCG-CGGGGTGCGTCAG CCAGAA CTGGCGCATCCCGGCGA TGTTTAACCCGGCCC TERM 5372 4099042 - 4099078 + gF 86 -14.5 -2.60496 | gap 1, opp_overlap 4099029, overlap 4099041 4099036 CAGCCAGCCCGTGGG CG-CGGGGTGCGTCAG CCAGAA CTGGCGCATCCCGGCG ATGTTTAACCCGGCC metF 4100688 - 4101578 + | 5,10-methylenetetrahydrofolate reductase TERM 5373 4101585 - 4101600 + F 87 -10.4 -4.1711 | opp_overlap 4101579 GGTTTATAACCTCCA GCTCCC TGCC GGGAGC TTTATTACACCTCAT TERM 5374 4102014 - 4102035 + G 70 -3 -4.71791 | gap 1 AACCGTGGTGGCCCG CCGAC-TGG GGCAG CTATGTCGG TTTGTTTATTCGTAT TERM 5375 4102398 - 4102385 - g 83 -9.5 -4.08692 | opp_overlap 4102394 GAAGCGCTGGCAAAA GCGCC GCTG GGCGC GACCGAGATGGGCCT katG 4101743 - 4103923 + | catalase (hydroperoxidase I) TERM 5376 4104009 - 4103990 - T 100 -10.7 -5.41143 | opp_overlap 4103990 CACCGGGCAAAAAAA TCCCCGC GCAATT GCGGGGA TTTTTCATTGCAAGC TERM 5377 4103990 - 4104009 + T 100 -11.4 -4.8622 | opp_overlap 4103990 CACCGGGCAAAAAAA TCCCCGCG CAAT TGCGGGGA TTTTTCATTGCAAGC gldA 4105133 - 4104030 - | glycerol dehydrogenase TERM 5378 4104475 - 4104485 + g 81 -6.8 -4.70626 | overlap 4104466 ACGTGCTGTTCGGCG GCCA ACA TGGC TTTTTCGCCTTCTTC talC 4105807 - 4105145 - | fructose-6-phosphate aldolase TERM 5379 4105654 - 4105664 + g 77 -8.2 -4.09685 | opp_overlap 4105646, overlap 4105646 ATAAAGTGCCTTCTT CGCC GAT GGCG TTTTGCAGCCTGGGC yijO 4106898 - 4106062 - | AraC family transcriptional regulator TERM 5380 4106978 - 4106990 + r 77 -10.5 -3.30124 | opp_overlap 4106966 4106963, overlap 4106967 TTATTGCCGGATAGC GGCGC TTT GCGCC TTATCCGGACTACGG yijP 4108792 - 4107059 - | hypothetical protein TERM 5381 4108961 - 4108990 + r 100 -12.1 -4.68655 | opp_overlap 4108949 ACAGCAGTATTTCAT GCCGCCCCCAC ATAACTGC GTGAGGGCGGC TTTCTTTTGGCGTTA ppc 4111654 - 4109003 - | phosphoenolpyruvate carboxylase TERM 5382 4109994 - 4110016 + g 70 -7 -4.09685 | gap 1 TGATACTGCGCCCAT GACGC-GGC CATGAC GCCGGCGTC TTTTGCCGAGTCGGA TERM 5383 4110376 - 4110396 + g 82 -11.1 -3.78775 | opp_overlap 4110372, overlap 4110364 GGATCAGGAAGGCCT GCTTGTCGG CTT CCGACCAGC TTTCGTAGTCGCCAA TERM 5384 4111361 - 4111372 + g 74 -7.2 -4.08945 | overlap 4111362 4111363 4111366 CACTTCCGGGTTGCT GGCG GCTT CGCC TTTTGGCGAAATGCT TERM 5385 4111554 - 4111590 + g 73 -8.8 -3.85817 | opp_overlap 4111561 4111564, overlap 4111557 CGGATTGTTTCTACG CGATCAAGAATGTGCT CTCCC AGCGCATCCTTGATGG TTTCTCCCAGCACCT TERM 5386 4111837 - 4111819 - R 71 -7.4 -3.85698 | opp_overlap 4111818 GCCGTCTTTTATAAA GCCACG TAAAACC CGTGGC GTCAATTACTGCGAA argE 4113174 - 4112023 - | acetylornithine deacetylase argC 4113263 - 4114267 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 5387 4114488 - 4114461 - g 75 -4 -4.89063 | gap 1, opp_overlap 4114481, overlap 4114463 CCAGTGAAAAAGAAA GA-CGGCCTGCGC GTG ACGCCTGCCGATC AGATTGGCATCATTA TERM 5388 4114638 - 4114607 - g 70 -8.7 -3.63627 | opp_overlap 4114626 TGGCGACAGCGTAAA CGTGACCCAACTC GATGAA GCGTTAGGCCACG TCGGGCTGGCGCAGC argB 4114278 - 4115051 + | acetylglutamate kinase TERM 5389 4115492 - 4115474 - g 87 -8.1 -4.57569 | CCAGTTGGGTAAAAA GCTGCAC ACCGG GCGCAGC CGTAACGATCAGGTG argH 4115169 - 4116545 + | argininosuccinate lyase TERM 5390 4116578 - 4116605 + F 91 -8.2 -5.00616 | opp_overlap 4116576 CCATCAGGTAATACT GCCCGGCCGAGC ATCA GCGACGCCGGGC TTTTTTACGCAAAAA TERM 5391 4116641 - 4116625 - f 100 -13.7 -6.11644 | TTACGCAAAAAAAAA GCGGACC AGA GGTCCGC AAAAGTTCACGTTGG oxyR 4116830 - 4117747 + | DNA-binding transcriptional regulator OxyR udhA 4119130 - 4117730 - | soluble pyridine nucleotide transhydrogenase TERM 5392 4118790 - 4118778 - G 71 -4.7 -4.63218 | overlap 4118779 TGTTCGTCAATAAAA TGGGC GTT GCCCT GCAAGATTTCACAGT yijC 4119332 - 4119964 + | DNA-binding transcriptional repressor FabR yijD 4119980 - 4120339 + | hypothetical protein trmA 4121486 - 4120386 - | tRNA (uracil-5-)-methyltransferase TERM 5393 4120833 - 4120819 - G 85 -4.2 -5.27938 | AGCGCTAAAGAAAAA TTGCCG TTG CCGCAA TACAACTCAAGCAGA TERM 5394 4121971 - 4121983 + GH 74 -10.5 -3.29461 | AACCGTTTTCAGCAG CCGCG CAG CGCGG TTCTGGCGCCCGTTA btuB 4121860 - 4123704 + | vitamin B12/cobalamin outer membrane transporter TERM 5395 4123713 - 4123746 + GF 71 -10.3 -2.64354 | gap 1, overlap 4123712 CTTCTGAACCACGTC CCACCG-TGCTGGTAT TTG ATTCCGGCGTCGGTGG ATTGTCGGTCTATGA TERM 5396 4123760 - 4123792 + GF 73 -10.5 -3.09349 | opp_overlap 4123767 GGATTGTCGGTCTAT GATGAGATTCGGCGG CTC CTGCCGGATCTCCAC TATATATATGCTTTC murI 4123649 - 4124500 + | glutamate racemase TERM 5397 4124684 - 4124668 - f 78 -5.1 -5.02421 | AAAAGCAAAAATAAA CGCTTGA CTC TGAAGCG GGAAAGCGTAATATG TERM 5398 4126812 - 4126775 - f 77 -3.4 -5.14563 | opp_overlap 4126777 4126805, overlap 4126777 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 5399 4126875 - 4126851 - f 71 -8 -3.93061 | gap 1, opp_overlap 4126851 4126858, overlap 4126855 4126861 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5400 4127429 - 4127417 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5401 4130070 - 4130089 + F 91 -7.8 -5.14477 | opp_overlap 4130062 4130070 CAAATAAGTGAAGAA GCCCATCC TGAC GGATGAGC TTTTTTGCGTGTGTG TERM 5402 4130089 - 4130070 - f 79 -10 -3.7956 | opp_overlap 4130070, overlap 4130062 CAAATAAGTGAAGAA GCCCATCC TGAC GGATGAGC TTTTTTGCGTGTGTG TERM 5403 4130177 - 4130133 - f 79 -11.4 -3.30243 | gap 1, opp_overlap 4130133 4130132, overlap 4130123 4130120 ATGTAGGCCTGATAA GCGCAGC-GCCATCAGGCAAC CTGC ACCGCCGGATGGCAGCTTCGC CTTATCCGGCCTACG murB 4130301 - 4131329 + | UDP-N-acetylenolpyruvoylglucosamine reductase birA 4131326 - 4132288 + | biotin--protein ligase TERM 5404 4132286 - 4132322 + T 95 -12.6 -3.91984 | gap 1, opp_overlap 4132288 4132296, overlap 4132296 CTGCGAAGCGCCGAA TAGTAAAAAAGGGGAGT CGGT ACTCCCCTTTTTT-CTG TTATTTCCGCAATCT TERM 5405 4132320 - 4132288 - T 82 -13 -3.04322 | gap 1, opp_overlap 4132286 4132296, overlap 4132296 GCGAAGCGCCGAATA GTAAAAAAGGGGAGT CGGT ACTCCCCTTTTTT-C TGTTATTTCCGCAAT TERM 5406 4132313 - 4132296 - T 100 -11.3 -5.27779 | opp_overlap 4132296 4132286, overlap 4132288 CCGAATAGTAAAAAA GGGGAGT CGGT ACTCCCC TTTTTTCTGTTATTT TERM 5407 4132296 - 4132313 + T 100 -11.3 -5.57729 | opp_overlap 4132288 4132296, overlap 4132286 CCGAATAGTAAAAAA GGGGAGT CGGT ACTCCCC TTTTTTCTGTTATTT coaA 4133273 - 4132323 - | pantothenate kinase TERM 5408 4132453 - 4132466 + g 70 -6.7 -4.10744 | opp_overlap 4132450 4132446, overlap 4132447 TTCCAAAGCGAAGCT GCTGT ATTA ACAGC TTCTTCTTTAGATAA TERM 5409 4132829 - 4132839 + g 78 -2.4 -5.1963 | GCATATCATACGATT CGGG GAA CCCC TTTTTCTTCATTAAC SPA3979 4133655 - 4133482 - | hypothetical protein TERM 5410 4133915 - 4133903 - H 73 -7.7 -4.15222 | opp_overlap 4133899 ACCGGCTCGAATAAA GAGAG TTT CTCTC GATATTCAGTGCAGA tuf 4134232 - 4135416 + | elongation factor Tu TERM 5411 4135468 - 4135451 - f 95 -11.3 -4.65747 | opp_overlap 4135451 CAATGCGCAATAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5412 4135451 - 4135468 + F 95 -11.3 -4.60924 | opp_overlap 4135451 CAATGCGCAATAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5413 4135938 - 4135952 + G 77 -11.4 -3.52896 | CCACGCTGATCGTCG CTGCGG TTA CCGCAG TTATGTCACTGATCC secE 4135646 - 4136029 + | preprotein translocase subunit SecE nusG 4136031 - 4136576 + | transcription antitermination protein NusG TERM 5414 4136611 - 4136593 - f 91 -7.4 -5.14563 | opp_overlap 4136597 GCTGCGATCAAAAAA GCAGCGAT CTA ATCGTTGC ATAGGGCGCGAAATT TERM 5415 4136616 - 4136644 + F 100 -17.6 -5.35224 | CTAATCGTTGCATAG GGCGCGAAATTG ACATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 5416 4137058 - 4137035 - g 81 -8.2 -4.26681 | gap 1 ACAAAGTAGGTAAAA TTTCCCGC-GC TCA GCTGCAGGAAA TCGCGCAGACCAAAG rplK 4136734 - 4137162 + | 50S ribosomal protein L11 TERM 5417 4137709 - 4137669 - g 74 -3.1 -4.98255 | opp_overlap 4137677 CCGTAACGACAAAAA CGGCATCATCCACACCACC ATC GGTAAAGTGGACTTTGACG CTGACAAACTGAAAG rplA 4137166 - 4137870 + | 50S ribosomal protein L1 rplJ 4138286 - 4138783 + | 50S ribosomal protein L10 TERM 5418 4138776 - 4138789 + F 74 -8.1 -3.89695 | opp_overlap 4138776 4138775 GCGATGCAAAAGAAG CTGCG TAAT CGCAG TTGTCTTTATCAAGC rplL 4138850 - 4139215 + | 50S ribosomal protein L7/L12 TERM 5419 4139255 - 4139280 + F 100 -17.7 -4.64766 | opp_overlap 4139248 4139246 4139245, overlap 4139226 AGAAATCAGGCTGAT GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGCTGTAAG TERM 5420 4139499 - 4139482 - f 71 -7.7 -3.86524 | ATAGTGTTGCACAAA CTGTCCC CCGC AGGACAG ATGGGTCGACTTGTC TERM 5421 4142575 - 4142559 - g 76 -2.9 -5.10033 | overlap 4142560 CGAAGAGAAACAAAA TCAGCTG GAA CAACTGG CTGAGCAGTATGACG rpoB 4139533 - 4143561 + | DNA-directed RNA polymerase subunit beta TERM 5422 4143580 - 4143609 + F 90 -13.6 -3.4252 | opp_overlap 4143576 4143574, overlap 4143581 TCGCTCAAACAGGTC ACTGGTGTCGGG GTAAAA CCCGACACCAGA TTGTGCTAACTCCGA TERM 5423 4143581 - 4143608 + F 100 -17.1 -2.65298 | opp_overlap 4143576 4143574, overlap 4143580 CGCTCAAACAGGTCA CTGGTGTCGGG GTAAAA CCCGACACCAG ATTGTGCTAACTCCG TERM 5424 4145368 - 4145348 - g 77 -11.1 -3.5882 | opp_overlap 4145347 4145348 CACACCAGCCTGAAA GACACGACC GTT GGTCGCGCC ATTCTGTGGATGATC TERM 5425 4145603 - 4145588 - g 78 -2.6 -5.24531 | gap 1, overlap 4145591 ATCCCGGAGAAAAAA CACGAGA TCA TCTC-TG AAGCGGAAGCCGAAG rpoC 4143638 - 4147861 + | DNA-directed RNA polymerase subunit beta' TERM 5426 4147869 - 4147898 + F 80 -12.9 -2.53164 | opp_overlap 4147870, overlap 4147868 ACGAGTAATCGTTAA ATGGTGGAGGGGT ATTT ATCCCTCCACCAG CTTCATGCTGGATAC TERM 5427 4147897 - 4147870 - f 93 -14.2 -3.61764 | opp_overlap 4147869 4147868 CGAGTAATCGTTAAA TGGTGGAGGGGT ATTT ATCCCTCCACCA GCTTCATGCTGGATA SPA3993 4147948 - 4148229 + | putative inner membrane protein SPA3994 4148668 - 4148231 - | hypothetical protein SPA3995 4148989 - 4149177 + | putative cytoplasmic protein TERM 5428 4149275 - 4149252 - T 100 -13.2 -6.14618 | opp_overlap 4149252 GACAAAATAAAAAAA CGGGAGATCG ATAA CAATCTCCCG TTTTTCACATTACGT TERM 5429 4149252 - 4149275 + T 95 -11 -4.67234 | opp_overlap 4149252 GACAAAATAAAAAAA CGGGAGATCG ATAA CAATCTCCCG TTTTTCACATTACGT thiH 4150461 - 4149328 - | thiamine biosynthesis protein ThiH thiG 4151228 - 4150458 - | thiazole synthase TERM 5430 4150631 - 4150573 - G 83 -12 -3.7108 | opp_overlap 4150589 ACCGCCAGACGGAAA GCGGTTGCC-ATCATCACCG-GATTGTCCG CCA CGG-CAATCGCGGTGTTGACCAGC-ACCGC ATCAGCGCCCATTTC TERM 5431 4150708 - 4150736 + g 74 -8.2 -4.05788 | gap 1 ACCACCGGCACGGTG GCC-TGCTGGATA ATAA TCTCCAGCATGGC TTTGGTTTCCAGCCC thiS 4151430 - 4151230 - | sulfur carrier protein ThiS thiF 4152169 - 4151411 - | thiamine biosynthesis protein ThiF thiE 4152797 - 4152162 - | thiamine-phosphate pyrophosphorylase thiC 4154692 - 4152797 - | thiamine biosynthesis protein ThiC TERM 5432 4153797 - 4153833 + g 84 -13.2 -3.02144 | gap 2 TTGACCTTTTCCAGC GCCTGGTA--GATCGGCA CGG TGCCGATCGGTACCGGGC TGTTACGCAGGATCC rsD 4155544 - 4155056 - | anti-RNA polymerase sigma 70 factor nudC 4155637 - 4156410 + | NADH pyrophosphatase hemE 4156451 - 4157515 + | uroporphyrinogen decarboxylase TERM 5433 4157934 - 4157924 - g 74 -2.4 -5.08824 | opp_overlap 4157924 GGCGTAGCGAAAAAA CGGC TAT GCGG TAAATTTGAGCCACT nfi 4157525 - 4158196 + | endonuclease V yjaG 4158238 - 4158828 + | hypothetical protein TERM 5434 4159230 - 4159248 + G 89 -8.8 -4.59342 | opp_overlap 4159227 AGAAATCAAAATCGC CGCCGCTA ACG TACCGGCG TTTGTTTCTGGTAAA hupA 4159015 - 4159287 + | transcriptional regulator HU subunit alpha TERM 5435 4159317 - 4159332 + G 95 -10.4 -4.64844 | opp_overlap 4159317 AACAGTTTTATCGAA GGGGCT CGTC AGCCCC TTTTGTCTGTCTGGC yjaH 4159299 - 4159991 + | hypothetical protein TERM 5436 4160022 - 4159999 - T 100 -16.8 -3.08679 | opp_overlap 4159993, overlap 4160004 GCTTTTGATGGAATA CCGAATGGCG AAGC CGCCATTCGG CAAACATGCTTTACC zraP 4160488 - 4160033 - | zinc resistance protein TERM 5437 4160592 - 4160641 + H 71 -10.2 -2.62184 | gap 1, opp_overlap 4160572 4160592 4160603, overlap 4160612 TTCAGGCGGCAAAAA GCGAGTAAAAATGACTCGC-ATG ACCCG CTTGGCGAGTCATTTTTACCCAC TAGTATCCGAAAGGG TERM 5438 4160641 - 4160592 - H 100 -14.6 -4.58395 | gap 1, opp_overlap 4160592 4160612, overlap 4160572 4160603 TTCAGGCGGCAAAAA GCGAGTAAAAATGACTCGC-ATG ACCCG CTTGGCGAGTCATTTTTACCCAC TAGTATCCGAAAGGG TERM 5439 4160630 - 4160603 - H 76 -4.9 -4.79667 | gap 1, opp_overlap 4160592 4160612, overlap 4160592 AAAAGCGAGTAAAAA TGACTCGC-ATG ACCCG CTTGGCGAGTCA TTTTTACCCACTAGT TERM 5440 4160612 - 4160630 + H 89 -8.8 -4.58663 | opp_overlap 4160603 4160592, overlap 4160592 TAAAAATGACTCGCA TGACCCGC TTG GCGAGTCA TTTTTACCCACTAGT TERM 5441 4161367 - 4161401 + G 89 -3.4 -5.44119 | overlap 4161376 TGATTGTTTTGTCTG CGTTAGCGGCGGTGCT GTT GGCAACGTTACTGGCG TTTTTTTGGCATCAG TERM 5442 4161949 - 4161972 + G 78 -6.7 -4.64144 | gap 1, opp_overlap 4161945 4161949, overlap 4161968 ATAGCGGGAAAGGGA TCGCC-CCGG ATCAG CTGGAGGCGA TTTTTACGCCTTATT hydH 4160742 - 4162139 + | sensor protein ZraS TERM 5443 4163421 - 4163394 - g 100 -9.7 -5.00616 | CGGCGCTGGAAAAAA CGGGCGGCAAC AAAACG GAAGCCGCCCG CCAATTGGGCATTAC hydG 4162145 - 4163470 + | transcriptional regulatory protein ZraR purD 4164756 - 4163467 - | phosphoribosylamine--glycine ligase purH 4166357 - 4164768 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 5444 4166105 - 4166135 + g 74 -7.4 -4.18197 | opp_overlap 4166094 4166093 TAATGGCATCGTCCT GGCCGCGGCGAC CGAGGAT GCCGCCGTGGAC TTTTGGATGCAGGGT TERM 5445 4166387 - 4166430 + r 85 -12.6 -3.31799 | opp_overlap 4166388 4166390 4166425, overlap 4166388 4166425 4166426 ATTTGACGATTACAG AGAGCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGCCCC TTATGGGGCATTCTC TERM 5446 4166429 - 4166388 - R 100 -20.5 -2.96216 | opp_overlap 4166387 4166388 4166425 4166426, overlap 4166390 4166425 TTTGACGATTACAGA GAGCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGCCC CTTATGGGGCATTCT TERM 5447 4166388 - 4166429 + r 90 -16.1 -2.58758 | opp_overlap 4166388 4166390 4166425, overlap 4166387 4166425 4166426 TTTGACGATTACAGA GAGCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGCCC CTTATGGGGCATTCT TERM 5448 4166427 - 4166390 - R 100 -19.5 -3.03443 | opp_overlap 4166388 4166387 4166425 4166426, overlap 4166388 4166425 TGACGATTACAGAGA GCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGC CCCTTATGGGGCATT TERM 5449 4166474 - 4166492 + r 83 -2.4 -5.63236 | opp_overlap 4166472, overlap 4166478 ATTGTAACGAAAACG TTTGCG CAACGCT CGCGAA TTTTTCTTTTTAAAT TERM 5450 4166770 - 4166756 - R 76 -4.2 -5.0916 | opp_overlap 4166756, overlap 4166757 4166765 GGTTGAAGAGAAAAA TCCTGA AAA TCAGGG TTGACTCTGAAAGAG TERM 5451 4166802 - 4166790 - R 71 -7.7 -4.00532 | overlap 4166800 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACGGTG TERM 5452 4168721 - 4168756 + r 77 -9.2 -4.00532 | opp_overlap 4168723 4168732 AGTCACCTGCCTTAA TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA TTTGCTCTTTAAAAA TERM 5453 4168820 - 4168796 - R 71 -8 -3.93061 | gap 1, opp_overlap 4168796 4168803, overlap 4168800 4168806 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5454 4169374 - 4169362 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5455 4171999 - 4172048 + r 100 -22.5 -2.7035 | opp_overlap 4172003 4172008, overlap 4172003 4172008 4172013 GGAACTGCCAGGCAT CAAATAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTATCTG TGGTCTGTCGGTGAG TERM 5456 4172044 - 4172003 - R 100 -17.5 -3.76224 | opp_overlap 4171999 4172003 4172008 4172013, overlap 4172008 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTGGTCTGTCGG TERM 5457 4172003 - 4172044 + r 100 -21.9 -2.99545 | opp_overlap 4172003 4172008, overlap 4171999 4172008 4172013 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTGGTCTGTCGG TERM 5458 4172008 - 4172039 + r 100 -17.4 -4.63586 | opp_overlap 4172008 4172003, overlap 4172003 4171999 4172013 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTGGTCT TERM 5459 4172039 - 4172008 - R 100 -13 -4.9448 | opp_overlap 4172003 4171999 4172008 4172013, overlap 4172003 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTGGTCT TERM 5460 4172013 - 4172034 + r 100 -15.9 -5.24647 | opp_overlap 4172008 4172003, overlap 4172008 4172003 4171999 TCAAATAAAACGAAG GGCCCTGTC GGAA GACAGGGCC TTTTGTTTTATCTGT TERM 5461 4172099 - 4172085 - R 71 -7.8 -3.99324 | opp_overlap 4172085 CCTGAGGAGGAGAAA TCCGCC GGG AGCGGA TTTGAACGTTGCGCA TERM 5462 4172171 - 4172212 + r 100 -16.7 -2.82015 | opp_overlap 4172174 4172179 4172182, overlap 4172179 4172182 CTGCCAGGCATCAGA CAAGTGAAGAAGCCCGTTC TGAC GGACGGGCTTCTTTGCGTG TGTGGTAACTGTAAA TERM 5463 4172209 - 4172174 - R 79 -10.4 -3.55447 | opp_overlap 4172171 4172179 4172182, overlap 4172179 4172182 CCAGGCATCAGACAA GTGAAGAAGCCCGTTC TGAC GGACGGGCTTCTTTGC GTGTGTGGTAACTGT TERM 5464 4172204 - 4172179 - R 83 -13.3 -3.27164 | opp_overlap 4172171 4172179 4172182, overlap 4172174 4172182 CATCAGACAAGTGAA GAAGCCCGTTC TGAC GGACGGGCTTC TTTGCGTGTGTGGTA TERM 5465 4172179 - 4172204 + r 100 -15.5 -3.74792 | opp_overlap 4172179 4172174 4172182, overlap 4172171 4172182 CATCAGACAAGTGAA GAAGCCCGTTC TGAC GGACGGGCTTC TTTGCGTGTGTGGTA TERM 5466 4172201 - 4172182 - R 76 -9.2 -3.76837 | opp_overlap 4172179 4172171 4172182, overlap 4172179 4172174 CAGACAAGTGAAGAA GCCCGTTC TGAC GGACGGGC TTCTTTGCGTGTGTG TERM 5467 4172182 - 4172201 + r 87 -11.4 -3.99985 | opp_overlap 4172182 4172179 4172174, overlap 4172179 4172171 CAGACAAGTGAAGAA GCCCGTTC TGAC GGACGGGC TTCTTTGCGTGTGTG TERM 5468 4172288 - 4172244 - R 79 -11.4 -3.30243 | gap 1, opp_overlap 4172243 4172244, overlap 4172234 4172231 ATGTAGGCCTGATAA GCGCAGC-GCCATCAGGCAAC CTGC ACCGCCGGATGGCAGCTTCGC CTTATCCGGCCTGCA yjaB 4172766 - 4172329 - | hypothetical protein metA 4172923 - 4173852 + | homoserine O-succinyltransferase TERM 5469 4173898 - 4173913 + F 93 -6.8 -5.63517 | opp_overlap 4173898 CAGCATGTTGAATCA GGCACC TTCG GGTGTC TTTTTTATTTCCGAA aceB 4174121 - 4175722 + | malate synthase TERM 5470 4175958 - 4175943 - g 90 -5.4 -5.15969 | overlap 4175954 4175956 GGTGAAGCGAAAAAA GGCTAT ATCA ACAGCC TGGGCGCGCTGACTG aceA 4175754 - 4177058 + | isocitrate lyase TERM 5471 4177495 - 4177522 + T 84 -8.4 -4.72188 | overlap 4177498 TTGCCGGTTATTTGA CCACCGCTCG TTAACACC CGAGCGGTTG TTTATTTTCAGTTCG TERM 5472 4177498 - 4177519 + T 81 -8.7 -4.44301 | overlap 4177495 CCGGTTATTTGACCA CCGCTCG TTAACACC CGAGCGG TTGTTTATTTTCAGT TERM 5473 4177810 - 4177822 + T 80 -5.5 -5.08088 | opp_overlap 4177803 4177801 ATTAACCACACCTGA CGGTA CGC TGCCG TTTTTATTGCCGATT SPA4024 4179282 - 4178875 - | putative cytoplasmic protein TERM 5474 4178968 - 4178956 - G 80 -4.7 -5.00616 | overlap 4178957 CTCGCGCTCAAAAAA GGCCC GGT GTGCC GCTTGCCAGTACGCC TERM 5475 4179094 - 4179041 - G 83 -9.6 -4.08767 | gap 3, opp_overlap 4179093 CTCATCTCGTTAAAA CGGATCAGCCTGAGCGCCAGCGTGCGT ATG ACGCACAC-GGCG-TC-GCCTGTGCCG TTGAGCACAATGTGA iclR 4180117 - 4179293 - | transcriptional repressor IclR TERM 5476 4179647 - 4179626 - G 80 -5.1 -4.83615 | gap 1, overlap 4179628 GAGCTGTGATAAAAA CGCCT-TGCC CGC GCCAGAGGCG TGCATGGGCAGCTTG TERM 5477 4181575 - 4181559 - g 75 -6.5 -4.41237 | overlap 4181561 ATCAAAGAAGAGAAA TACAGCG AAG CGCTGGA TGTCGCCCGTCAGCA TERM 5478 4181573 - 4181561 - g 73 -9.1 -3.79177 | overlap 4181559 CAAAGAAGAGAAATA CAGCG AAG CGCTG GATGTCGCCCGTCAG TERM 5479 4181627 - 4181676 + G 72 -12.1 -2.72344 | gap 1, opp_overlap 4181627, overlap 4181638 4181639 TATTGATATCAATAT GGATGAGGGGATGCTCGA-CGCCG AAG CGGCGATGGTGCGTTTCCTCAGCC TGATTGCCGGTGAGC TERM 5480 4183130 - 4183116 - g 76 -2.7 -5.0133 | overlap 4183117 CACGCCCGCAAAAAA CCGCG TACGC CGCCG GTCACGCTGGAAGCG metH 4180422 - 4184105 + | B12-dependent methionine synthase TERM 5481 4184134 - 4184164 + F 83 -9 -4.20918 | opp_overlap 4184136 4184138 4184141, overlap 4184136 4184138 4184141 CACTTTTCCTTACAA CATACAAGGCACTC ATT GGGTGCCTTGTCTC TTTCTTACAATTAAA TERM 5482 4184136 - 4184162 + F 93 -11.6 -3.70139 | opp_overlap 4184136 4184138 4184141, overlap 4184134 4184138 4184141 CTTTTCCTTACAACA TACAAGGCACTC ATT GGGTGCCTTGTC TCTTTCTTACAATTA TERM 5483 4184160 - 4184138 - f 79 -12 -3.17146 | opp_overlap 4184136 4184134 4184138 4184141, overlap 4184136 4184141 TTTCCTTACAACATA CAAGGCACTC ATT GGGTGCCTTG TCTCTTTCTTACAAT TERM 5484 4184138 - 4184160 + F 90 -14.2 -3.4214 | opp_overlap 4184138 4184136 4184141, overlap 4184136 4184134 4184141 TTTCCTTACAACATA CAAGGCACTC ATT GGGTGCCTTG TCTCTTTCTTACAAT TERM 5485 4184141 - 4184157 + F 79 -10.1 -3.83559 | opp_overlap 4184141 4184138 4184136, overlap 4184138 4184136 4184134 CCTTACAACATACAA GGCACTC ATT GGGTGCC TTGTCTCTTTCTTAC TERM 5486 4185068 - 4185097 + G 75 -12.8 -2.64759 | opp_overlap 4185057 4185058 4185055, overlap 4185067 4185065 AACAGCGCCGCCAAT GCTGCCGCGCGT CGCGTA GCGCTCGGCAGC CTATTGTTCAAATTG TERM 5487 4185241 - 4185267 + G 76 -5 -4.83169 | overlap 4185234 4185242 GCGCTGCCTGGCGAT GGTGCCATTTGC CGA GCTGATGGCGCG TTTTTGTAAACGGAT yjbB 4184372 - 4186003 + | hypothetical protein TERM 5488 4186010 - 4186061 + T 100 -16.8 -3.12351 | gap 1, opp_overlap 4186010 GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTACG GAGAACATGCG TGTAGGC-CCGCCATTCGGCA TTCAATGTGGCCAGG TERM 5489 4186061 - 4186010 - T 100 -13.9 -3.79043 | gap 1, opp_overlap 4186010 GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTAC GGAGAACATGCGT GTAGG-CCCGCCATTCGGCA TTCAATGTGGCCAGG pepE 4186768 - 4186079 - | peptidase E TERM 5490 4186130 - 4186169 + g 71 -10.6 -3.16881 | opp_overlap 4186130 4186133 TTCGCCCGCTTTAAA CACCCAGGTGGTATTCGG GCCG CCGAGAACCGCCTGGCCG TTGCTCACCTGAATC TERM 5491 4186467 - 4186480 + g 74 -8.1 -3.9693 | ACCGGCGCCAGCAGC TCGCG TTCA CGCGA TTCTTTCAGTAGCTG SPA4029 4186840 - 4186941 + | hypothetical protein TERM 5492 4187049 - 4187037 - g 89 -3.3 -5.55664 | overlap 4187045 TGACCAGCAAAAAAA TGGCC AAA GTCCA ACGCACGGCTAAAAA SPA4030 4186976 - 4187515 + | hypothetical protein yjbC 4187562 - 4188431 + | 23S rRNA pseudouridine synthase F yjbD 4188700 - 4188428 - | hypothetical protein SPA4033 4189521 - 4188763 - | deoR family regulatory protein TERM 5493 4188902 - 4188918 + g 79 -2.9 -5.1861 | opp_overlap 4188878 4188876 CCAAATTTGGTATGG TCGGCGA GAA TCACTGA TTTTTTGCTCATCGC SPA4034 4190371 - 4189508 - | hypothetical protein SPA4035 4191227 - 4190388 - | hypothetical protein TERM 5494 4190914 - 4190896 - G 70 -6.6 -4.08064 | AAGGTTTCGGTAAAA CCGCCGGC GAT ACCAACGG TGATAAAAATATCGT SPA4036 4192729 - 4191251 - | hypothetical protein TERM 5495 4191479 - 4191469 - G 86 -6.8 -5.00616 | TCCCGGCCCAAAAAA TGGC GGA GCCA AAAACAATTTTGTTG TERM 5496 4191559 - 4191579 + g 77 -3.9 -5.00616 | TAATGAGTAGACCCG GCGTAGC AACGGCA GCTTCGC TTTTTTCACGCGGGG TERM 5497 4193161 - 4193197 + r 76 -11.6 -2.6062 | gap 1, opp_overlap 4193173, overlap 4193160 4193162 GTGCCTGACGTGGGA ACCGCCGGATAA-GGCG CTTG CGCCGTTATCCGGCAGC GTATTGTCTGATAGC TERM 5498 4193162 - 4193198 + r 70 -8.9 -3.34902 | gap 3, opp_overlap 4193173, overlap 4193161 4193160 TGCCTGACGTGGGAA C-C-GCCGGATAA-GGCG CTTG CGCCGTTATCCGGCAGCG TATTGTCTGATAGCG lysC 4194588 - 4193239 - | aspartate kinase III pgi 4194933 - 4196582 + | glucose-6-phosphate isomerase TERM 5499 4196590 - 4196638 + F 73 -11.2 -2.72144 | gap 2, opp_overlap 4196636 4196637, overlap 4196572 4196572 4196591 GCGCCTGATGGCGCT GCGCTTATCCGGTCTACGTAATGC ATA GCGTC-TGTAGGCCGGATAAG-GC GTTTCGCCGCCATCC TERM 5500 4196591 - 4196639 + F 82 -11.2 -3.53811 | opp_overlap 4196636 4196637, overlap 4196572 4196572 4196590 CGCCTGATGGCGCTG CG-CTTATCCGGTCTACGTAATGC ATA GCGTC-TGTAGGCCGGATAAGGCG TTTCGCCGCCATCCG TERM 5501 4196700 - 4196681 - f 83 -4.2 -5.31072 | opp_overlap 4196682, overlap 4196682 ATAAGATAATAAAAA GGCCGATA TTCA CATCGGCT TTTTTTATAAGATAA TERM 5502 4196682 - 4196699 + F 91 -7 -5.626 | opp_overlap 4196682 4196681 TAAGATAATAAAAAG GCCGAT ATTCAC ATCGGC TTTTTTTATAAGATA yjbE 4197023 - 4197268 + | hypothetical protein TERM 5503 4197308 - 4197287 - f 76 -11.7 -2.72344 | opp_overlap 4197287 4197290, overlap 4197290 CGGTACGTTTAACCA TAACCACAC TCCG GTGTGGTTA TTTTGCCCCTCTGGA TERM 5504 4197287 - 4197308 + F 95 -11.7 -4.13014 | opp_overlap 4197287 4197290, overlap 4197290 CGGTACGTTTAACCA TAACCACAC TCCG GTGTGGTTA TTTTGCCCCTCTGGA TERM 5505 4197305 - 4197290 - f 72 -9 -3.51329 | opp_overlap 4197287 4197290, overlap 4197287 TACGTTTAACCATAA CCACAC TCCG GTGTGG TTATTTTGCCCCTCT TERM 5506 4197290 - 4197305 + F 79 -9 -4.18908 | opp_overlap 4197290 4197287, overlap 4197287 TACGTTTAACCATAA CCACAC TCCG GTGTGG TTATTTTGCCCCTCT TERM 5507 4197626 - 4197612 - g 70 -7 -4.07568 | GCCGTCTGGTCAAAA CGCTGC TCA GCGGCG ACAACCTGATCGATG yjbF 4197332 - 4197970 + | putative lipoprotein yjbG 4197967 - 4198704 + | hypothetical protein TERM 5508 4199604 - 4199582 - gf 72 -10.6 -2.82987 | opp_overlap 4199581 GCAATACCGACCACA GCCGCAGGAT GCC ATCCTGCAAC ATTCGGTAGTGGCTA yjbH 4198635 - 4200800 + | putative lipoprotein yjbA 4200943 - 4201353 + | phosphate-starvation-inducible protein PsiE TERM 5509 4201438 - 4201423 - T 100 -10.4 -5.66684 | TAACGCATAAAAAAA GCGCTC CGAA GAGCGC CAAAATACGACCATA malG 4202409 - 4201519 - | maltose transporter permease malF 4203968 - 4202424 - | maltose transporter membrane protein TERM 5510 4202994 - 4202982 - G 71 -4.7 -4.55849 | CAAAATTGAAATAAA CGACG GTA CGGCG TAGGGCAGAATCAGC TERM 5511 4203925 - 4203947 + g 75 -4 -4.91852 | opp_overlap 4203926, overlap 4203915 4203927 ATTACTGACCATTTA AGCTGGTCGC TTT GCCACCAGTG TTTCTTTTTAATGAC TERM 5512 4203927 - 4203945 + g 76 -8.8 -4.06997 | opp_overlap 4203926, overlap 4203915 4203925 TACTGACCATTTAAG CTGGTCGC TTT GCCACCAG TGTTTCTTTTTAATG TERM 5513 4204025 - 4204067 + r 95 -12.9 -3.86346 | gap 1, opp_overlap 4204064 TGTGCCTGATGGCGC TGCGCTTATCAGGCCTACGG TGTG TTGTAGGCCGGATAAG-GCA TTTATGCCGCCATCC malE 4205290 - 4204100 - | maltose ABC transporter periplasmic protein TERM 5514 4206087 - 4206113 + G 74 -4.4 -4.7497 | gap 1, overlap 4206096 CGCGTAGCGATTGGC CGCACGCTGGT GGCGGA GCC-GCGTGTG TTTTTGCTGGATGAA malK 4205652 - 4206761 + | maltose/maltodextrin transporter ATP-binding protein TERM 5515 4207030 - 4207018 - g 74 -7.7 -4.13995 | GGTGCACAAAGTAAA TACCG TCT CGGTA ACGAATGTGAAACCT lamB 4206850 - 4208208 + | maltoporin TERM 5516 4209116 - 4209078 - g 76 -12.2 -3.09803 | TAACGGTAGGCAATA CCGCCGCGCCGGTCGCTG CGC CAGCGCCAGTCGCGCCGA AGAAAAGCGAACCGA malM 4208372 - 4209289 + | maltose regulon periplasmic protein TERM 5517 4209323 - 4209342 + F 100 -11.4 -5.75599 | opp_overlap 4209321 GATTTTGCAGCAACT GGTGCGTC TCCT GGCGCACC TTTTTTTGTCATTTC TERM 5518 4209928 - 4209938 + G 89 -3.2 -5.47821 | CGGAAAACCGCTGTT GCTT ACC GAGC TTTTTTTACCTGCAT ubiC 4209470 - 4209967 + | chorismate pyruvate lyase ubiA 4209981 - 4210853 + | 4-hydroxybenzoate octaprenyltransferase plsB 4213372 - 4210952 - | glycerol-3-phosphate acyltransferase TERM 5519 4213788 - 4213774 - g 72 -11.4 -3.06679 | opp_overlap 4213770 4213769 AACAGCGCTATTGAA GCGGTC GTT GACCGC ATCGGTTCTGAATAC dgkA 4213543 - 4213911 + | diacylglycerol kinase TERM 5520 4214150 - 4214111 - g 100 -18.8 -3.53444 | gap 1, opp_overlap 4214099 CGACGCGTGCGGAAA TCGCGCAGCGTTTGGGG TTCCGTT CCCCAAACGCTGCG-GA AGAACACCTTAAGGC lexA 4214020 - 4214628 + | LexA repressor TERM 5521 4214943 - 4214974 + G 86 -7.2 -4.73614 | gap 1 GCCCTGTTTTCCTGG GCGGCGTGGCGGTGG GCG CGACTGCCAC-CAGC TTTCTTTTCATGCTG TERM 5522 4215486 - 4215506 + G 70 -6.7 -4.11692 | TGCTAAAACAGGCCT GGCGCGGCA ACG TGCGCCGCC TTTTGGCGCTCAATC dinF 4214807 - 4216132 + | DNA-damage-inducible SOS response protein SPA4056 4216132 - 4216242 + | hypothetical protein yjbJ 4216261 - 4216473 + | putative stress-response protein TERM 5523 4216531 - 4216558 + T 71 -3.4 -4.74103 | gap 1, overlap 4216530 GTTTGCTTATGAATG CGGGCGTGC CCCTCTCTACT GC-CGCCCG TTTTTCCGTTCAGGC zur 4217088 - 4216573 - | zinc uptake transcriptional repressor TERM 5524 4217025 - 4217043 + g 78 -6.6 -4.66833 | overlap 4217027 GAGGCGTCAGGCGCA CGTTGCGC TGC GCGCAGAG TTTTTCAGCTTGCGC TERM 5525 4217775 - 4217747 - g 74 -4.4 -4.74504 | gap 1, overlap 4217748 4217749 ATCTCAACGGAAAAA CCGCCCG-CGCCA ATGC CGGCGCCGGGTTG GCGGTAAGTATTCCA SPA4059 4217335 - 4218636 + | hypothetical protein TERM 5526 4218655 - 4218675 + F 100 -18.3 -3.70068 | TCTGAGGTGCTTTCA CCGGAGGCG CTA CGCCTCCGG TTTAGCGTTATGCTA yjbN 4218732 - 4219730 + | tRNA-dihydrouridine synthase A TERM 5527 4219762 - 4219783 + F 76 -2.2 -5.4433 | AGTCAATCTCACCAC GCTCTGTG CAGTCT TGCAGGGC TTTTTCTTTATATAT pspG 4219898 - 4220140 + | phage shock protein G TERM 5528 4220283 - 4220272 - T 86 -3 -5.80364 | opp_overlap 4220275 4220276, overlap 4220276 AGCCGAACAAAAAAA GAAA GGGC TTTC CGGGTGGAAGCCCAA TERM 5529 4220296 - 4220276 - T 95 -7.6 -5.33131 | gap 1, opp_overlap 4220275 4220276, overlap 4220272 GAACAAAAAAAGAAA GGGCTTTCC GGGT GGAA-GCCC AATTTCTTTGCAGAG qor 4221298 - 4220315 - | quinone oxidoreductase, NADPH-dependent TERM 5530 4220386 - 4220402 + g 74 -7.3 -4.08216 | CGCGACGGGCATCTT TTAACGC ATA GCGTTGA TTTTCAGCCACATCA TERM 5531 4220755 - 4220767 + g 75 -6.2 -4.58395 | opp_overlap 4220734, overlap 4220742 AGGCGCCGGCGTCCA GCGC CCGCT GCGC TTTTTGCGCGCTACC TERM 5532 4221449 - 4221438 - g 71 -5.8 -4.36914 | opp_overlap 4221438 GTTGCCGGGATAAAA GTGC CGCC GCAC TCGATTGAAGCGGAA TERM 5533 4221710 - 4221698 - g 78 -6.9 -4.59853 | overlap 4221700 GGAACTGTCTAAAAA CACGC CAA GCGCG GCGAACATCAGTGCT dnaB 4221363 - 4222778 + | replicative DNA helicase alr 4222810 - 4223889 + | alanine racemase tyrB 4224075 - 4225268 + | aromatic amino acid aminotransferase TERM 5534 4225364 - 4225396 + F 72 -2.8 -5.00616 | gap 1, overlap 4225366 CGCAGATAATCCTTC CT-TTTGACCGTTAC TGGC GTTATGGTCAGATAG TTTTTTGAGCAAAGA TERM 5535 4225633 - 4225655 + G 83 -10.4 -3.92324 | AAAACAGCCTGACCG GACGCCCGCC GAT GGCGGTCGGC TTTGATATTGACGAC aphA 4225455 - 4226168 + | acid phosphatase/phosphotransferase TERM 5536 4226196 - 4226172 - f 73 -4.2 -4.77036 | opp_overlap 4226175, overlap 4226173 4226175 TCGGAGTACTAAAAA TCAGGAGAGC GACAG GCTCTCCTTT TTTGCATGATTTTTG TERM 5537 4226175 - 4226193 + F 100 -10.3 -5.13521 | opp_overlap 4226175 4226173 4226172 GAGTACTAAAAATCA GGAGAGC GACAG GCTCTCC TTTTTTGCATGATTT TERM 5538 4226193 - 4226175 - f 74 -10.3 -3.29543 | opp_overlap 4226175, overlap 4226173 4226172 GAGTACTAAAAATCA GGAGAGC GACAG GCTCTCC TTTTTTGCATGATTT yjbQ 4226297 - 4226713 + | hypothetical protein yjbR 4226716 - 4227072 + | hypothetical protein SPA4069 4227411 - 4227073 - | hypothetical protein TERM 5539 4227346 - 4227331 - G 80 -10.4 -3.86524 | ATACGTCTGGATAAA CTCGGC AATC GCCGAG GAAGCTATAGGGTGT SPA4070 4227841 - 4227398 - | putative lipoprotein TERM 5540 4227981 - 4227946 - R 100 -9.7 -4.77036 | opp_overlap 4227944, overlap 4227949 4227950 TGGGATGAGGAAAAA TGATGCCGCTTCCCG GCGAAT CGGAAAGCGGCGTGA AGGTTATTTGAGCAT TERM 5541 4227978 - 4227949 - R 77 -11.4 -3.29543 | opp_overlap 4227944, overlap 4227946 4227950 GATGAGGAAAAATGA TGCCGCTTCCCG GCGAAT CGGAAAGCGGCG TGAAGGTTATTTGAG TERM 5542 4227977 - 4227950 - R 86 -14.9 -2.57003 | opp_overlap 4227944, overlap 4227949 4227946 ATGAGGAAAAATGAT GCCGCTTCCCG GCGAAT CGGAAAGCGGC GTGAAGGTTATTTGA uvrA 4230810 - 4227985 - | excinuclease ABC subunit A TERM 5543 4228042 - 4228010 - G 72 -12 -2.60901 | gap 1, opp_overlap 4228010 4228009, overlap 4228009 ATAGGTTTAAGGAAG CG-GGCGGTATGCGA CGCC TCGCACTCCGCCACG GTTTCCGGCGTACCG TERM 5544 4229884 - 4229870 - G 74 -2.8 -4.84363 | overlap 4229872 TGAAAGTAGTAAAAA TTGCGA CGA TCCCAA CCACGAATCGCGCCG TERM 5545 4230640 - 4230622 - G 72 -2.4 -4.88736 | gap 1 CATGAGCGACAAAAA CTGCCGC GCGTAA GCGG-AG AGCGATTCAACGTAA ssb 4231058 - 4231588 + | single-strand DNA-binding protein TERM 5546 4231668 - 4231649 - f 88 -12.2 -3.53012 | opp_overlap 4231649 4231662, overlap 4231662 TCTCGTCTGCTGAAA TGCCTGGT GTAA ACCAGGCA TTTTCTTACCTGGTA TERM 5547 4231649 - 4231668 + F 100 -12.2 -4.69053 | opp_overlap 4231649 4231662, overlap 4231662 TCTCGTCTGCTGAAA TGCCTGGT GTAA ACCAGGCA TTTTCTTACCTGGTA TERM 5548 4232551 - 4232579 + F 74 -6.8 -4.30719 | opp_overlap 4232554, overlap 4232554 CCTAATTAAAAAAAT GAAGAGTGTTTT TAATT AAAGCACTCATC TTTGTTGTGGGCGCA TERM 5549 4232595 - 4232617 + F 72 -2.8 -4.98255 | TTTGTTGTGGGCGCA TAAAAATGGC GTC GTTGTTTTTA TTTTTCTGATTACGA SPA4073 4232777 - 4233409 + | hypothetical protein SPA4074 4233406 - 4234794 + | putative integral membrane protein SPA4075 4234784 - 4236103 + | putative type-I secretion protein SPA4076 4236100 - 4237377 + | putative type-I secretion protein TERM 5550 4238048 - 4238035 - g 79 -3.1 -5.14163 | ACCTATTAATAAAAA TACCA GTAC TGGCA AAAGTAATAGCAGTA TERM 5551 4238538 - 4238528 - g 75 -6.8 -4.39998 | opp_overlap 4238527 TATGTAGATAATAAA CTGG TTG CCAG CGTTGATGTCGATAA TERM 5552 4238950 - 4238961 + G 73 -5.8 -4.44797 | GCATACCTCTGCGAC GGCA AATC TGCC TTTTACTATTGATAC TERM 5553 4239283 - 4239306 + G 76 -3 -5.093 | overlap 4239284 TACTGTTGCCCCTGT ACCTCCGACG GTTT CTTTGGAGGA TTTTGTTGTTTTACC TERM 5554 4240181 - 4240166 - g 74 -4.7 -4.81851 | ACGCAAACGCAAAAA CCAAC AATAGA GTTGG TCAACGATACGGGGG TERM 5555 4243928 - 4243914 - g 70 -7.1 -4.11394 | ACGGCACGTTTAAAA CGGTG GTACT CACCG AATCAGCCGACGGCT TERM 5556 4246113 - 4246127 + G 71 -7.2 -3.96624 | opp_overlap 4246102 AAGAGGTATCATTCA CAATAG ACA CTATTG TTTCTGATCCCAGTA TERM 5557 4249243 - 4249220 - g 77 -4.4 -4.8622 | opp_overlap 4249234, overlap 4249222 TGGGTTAATGAAAAA GGCCACTGGC AGAT GCCGGTGAAC CCGCTTTATTTCACA TERM 5558 4250048 - 4250038 - g 81 -2.4 -5.43866 | opp_overlap 4250038 TAATGCTGAAAAAAA TGCC GAT GGCG TTTGGTTCTTTACGC SPA4077 4237394 - 4251076 + | putative inner membrane protein TERM 5559 4251085 - 4251108 + F 95 -12.4 -4.00868 | opp_overlap 4251084 4251081 4251077, overlap 4251086 CGCATAATAACGGAG GCCCCTCACC TTTG GGTGAGGGGG TTTACTTATGGATAA TERM 5560 4251086 - 4251107 + F 93 -15.9 -3.00039 | opp_overlap 4251084 4251081 4251077, overlap 4251085 GCATAATAACGGAGG CCCCTCACC TTTG GGTGAGGGG GTTTACTTATGGATA SPA4078 4251116 - 4253182 + | putative type-1 secretion protein TERM 5561 4253252 - 4253232 - T 100 -11.2 -5.4505 | opp_overlap 4253232 CTGCTTAATAAAAAA GACCCGTT GCACA AACGGGTC TTTTTTTGTCATTTA TERM 5562 4253232 - 4253252 + T 100 -11.2 -5.75599 | opp_overlap 4253232 CTGCTTAATAAAAAA GACCCGTT GCACA AACGGGTC TTTTTTTGTCATTTA yjcB 4253742 - 4253461 - | hypothetical protein TERM 5563 4254841 - 4254853 + G 77 -4.8 -4.88067 | GGGAATGTATGATAC GGTG ACCAA CACC TTTTTCTCCCTGAGT TERM 5564 4255225 - 4255264 + G 70 -6.6 -4.1822 | gap 2 CGAAGCGCTATTGCG TTGGC-CGGGCT-ATCAC GGTCCG GTGATGAGCCCGTGCGAA TTTATTCCGCTGGCG TERM 5565 4255887 - 4255860 - g 91 -11.2 -4.30719 | overlap 4255861 CCTGGTTACAACAAA CGCCCGCGCCTC TGAC GATACGCGGGCA GACGCCCTACAGGCG TERM 5566 4255886 - 4255861 - g 83 -12.5 -3.1811 | overlap 4255860 CTGGTTACAACAAAC GCCCGCGCCTC TGAC GATACGCGGGC AGACGCCCTACAGGC yjcC 4254305 - 4255906 + | hypothetical protein soxS 4256217 - 4255894 - | DNA-binding transcriptional regulator SoxS soxR 4256304 - 4256762 + | SoxR protein TERM 5567 4256823 - 4256798 - f 95 -13.4 -4.1899 | opp_overlap 4256798, overlap 4256803 TGAGCTCACCTAAAA CTAAAGCGCC GCTAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5568 4256798 - 4256823 + F 100 -13.4 -4.4572 | opp_overlap 4256798 4256803 TGAGCTCACCTAAAA CTAAAGCGCC GCTAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5569 4256818 - 4256803 - f 76 -7.5 -4.21922 | opp_overlap 4256798, overlap 4256798 TCACCTAAAACTAAA GCGCC GCTAAG GGCGC TTTAGTTTGTTTCCG SPA4084 4257055 - 4257723 + | putative glutathione S transferase TERM 5570 4258589 - 4258570 - g 74 -4.8 -4.72272 | CCTGGTCATTAAAAA CCCGCTGG ATGG CCTGCCGG TCGCGCTGGGTGATT TERM 5571 4259375 - 4259391 + G 81 -6.5 -4.82901 | GGAACTGTCGTCATT GCGATCG CAC TGGTCGC TTTTTATGCCGGCGG yjcD 4258070 - 4259419 + | putative xanthine/uracil permeases family protein TERM 5572 4259434 - 4259466 + F 100 -13.6 -4.07885 | gap 1, opp_overlap 4259441, overlap 4259441 GTTCTGCCTTCATTC TGAAAAACGGGCGGC GTTG GTCGCCCGTTTT-CA TTTTCAGGACACATC TERM 5573 4259460 - 4259441 - f 93 -10.6 -4.59773 | opp_overlap 4259441 4259434 CTTCATTCTGAAAAA CGGGCGGC GTTG GTCGCCCG TTTTCATTTTCAGGA TERM 5574 4259441 - 4259460 + F 100 -12.8 -4.67038 | opp_overlap 4259441, overlap 4259434 CTTCATTCTGAAAAA CGGGCGGC GTTG GTCGCCCG TTTTCATTTTCAGGA TERM 5575 4259676 - 4259703 + G 77 -8.4 -4.09556 | gap 1, overlap 4259670 4259698 CCTCATGCAGATCGC CGTTGGC-GCGCT GTT GGCGTGGCCGACG TTTGGTTTGCATGTG TERM 5576 4260061 - 4260119 + G 70 -9.4 -3.62746 | opp_overlap 4260061 4260062 CTGGTATCGCTGAAA TTCGCCGTCGCGGTGGCGATGGGGACGA TGG TCTTTACCGTCGGCGGCGCGACGCTGGA ATTTTTTAAGGTCGC yjcE 4259524 - 4261215 + | putative sodium/hydrogen exchanger family protein TERM 5577 4261239 - 4261270 + T 71 -10.2 -2.71011 | opp_overlap 4261259 GCCCGGTGGCGCCAT GCTTATCGGGCCTA CAAG TAGGCCGGATAAGG TGCTTGCGCCGCCAT SPA4087 4262197 - 4261310 - | lysR family regulatory protein SPA4088 4262301 - 4262711 + | hypothetical protein TERM 5578 4263185 - 4263204 + G 76 -5 -4.73448 | gap 1, overlap 4263187 4263196 4263200 CTGGCGTGTTTGGCA TGGCG-GTC GGC GACGCGCTA TTTTTGCGTCTCTCT SPA4089 4262704 - 4263393 + | hypothetical protein actP 4265081 - 4263432 - | acetate permease TERM 5579 4265310 - 4265325 + r 74 -5.4 -4.64598 | overlap 4265311 TAACCGACAGAATCG TGGCAA ACCG TTGCCG TTTTTCAACTAATTC acs 4267592 - 4265634 - | acetyl-CoA synthetase TERM 5580 4267310 - 4267326 + g 84 -8.7 -4.26076 | opp_overlap 4267310 CGCCTTCCCAGATAA TGGCGGT GCG ATCGCCA TTTTCCTGCAAATGG SPA4093 4267779 - 4267925 + | hypothetical protein TERM 5581 4268005 - 4267984 - f 91 -7.3 -5.4588 | overlap 4267974 4267985 GAAAACGATAAAAAA TCGCCATTA AAGA TAATGGCGC AATCTGGATGAGACC TERM 5582 4268004 - 4267985 - f 84 -10.8 -3.85088 | overlap 4267974 4267984 AAAACGATAAAAAAT CGCCATTA AAGA TAATGGCG CAATCTGGATGAGAC TERM 5583 4268166 - 4268149 - g 72 -4.1 -4.74103 | TGTTGAAGCGAAAAA TGAAACG TTCG CGCCTCA ACACCCCGACCAATA TERM 5584 4269415 - 4269405 - g 70 -6.8 -4.08945 | AGGACTTCCTGAAAA CGGT CGT ACCG CAGTGGGAAGATCAG nrfA 4268024 - 4269460 + | cytochrome c nitrite reductase nrfB 4269572 - 4270126 + | cytochrome c-type protein NrfB TERM 5585 4270622 - 4270606 - g 76 -10.8 -3.71108 | opp_overlap 4270605 4270601, overlap 4270595 4270615 AAAACTAACCTGAAA GCGGGC AAACA GCCCGC CTGCGTTGAGTCATG nrfC 4270123 - 4270794 + | cytochrome c-type biogenesis protein TERM 5586 4271694 - 4271708 + G 76 -3.4 -5.05712 | GCCAGTTTGACCGGC GTGCTG CTG CTGCGC TTTTTCATTCTTTAT nrfD 4270791 - 4271747 + | cytochrome c-type biogenesis protein nrfE 4271740 - 4273476 + | heme lyase subunit NrfE SPA4099 4273469 - 4273978 + | formate-dependent nitrite reductase complex subunit NrfF TERM 5587 4274213 - 4274195 - g 85 -2.4 -5.4505 | gap 1, overlap 4274196 GGCTGCAAGAAAAAA TCC-GCG CCAATC CGCAGGA TAGCGAGCAATGGGC nrfG 4273975 - 4274595 + | formate-dependent nitrite reductase complex subunit NrfG TERM 5588 4274654 - 4274641 - f 85 -5.9 -5.40072 | overlap 4274642 TGCTGTTTAAAAAAA CGGCG AATG CGCCA CAGGTAAAAATTAAT TERM 5589 4275559 - 4275570 + G 83 -7.2 -4.63527 | overlap 4275558 TGGTGATGCGCTATG CGCC AGTG GGCG TTTTTGCGCTGATCG TERM 5590 4276214 - 4276197 - g 77 -4.1 -5.0538 | TTTGACCGCAAAAAA GCGCT GGCCTATG AGCGC GATGTGCTGGGCAAA gltP 4274940 - 4276250 + | glutamate/aspartate:proton symporter yjcO 4277096 - 4276407 - | hypothetical protein TERM 5591 4276899 - 4276916 + g 75 -6.2 -4.57073 | overlap 4276898 CGCGCAGGCGTCGGC GTCGCC ACTGTC GGCGGC TTTTTGCGCCCAGTA TERM 5592 4277092 - 4277102 + g 75 -4 -4.88918 | AATGCAAGAAGTAGT TTCA TTT TGAA TTTTATTTAGGGTAC TERM 5593 4277175 - 4277156 - R 100 -13.6 -5.64274 | opp_overlap 4277156 GTATGGATAAAAAAA CAGCCTCC GGAC GGAGGCTG TTATAGGGAAAATGC TERM 5594 4277156 - 4277175 + r 86 -13.6 -3.29144 | opp_overlap 4277156 GTATGGATAAAAAAA CAGCCTCC GGAC GGAGGCTG TTATAGGGAAAATGC fdhF 4279420 - 4277273 - | formate dehydrogenase H TERM 5595 4277559 - 4277592 + g 77 -11.1 -3.57144 | gap 1 ACCAGCGCTTCATCT TCAATGCC-CAGACGC GCG GCGTCGGCGGTATTGA TTTGCGCATAGCCCG TERM 5596 4278106 - 4278117 + g 77 -7.2 -4.30576 | opp_overlap 4278098 GTAAAATCACATCCG CCGC CGAC GCGG TTTTGGTCATGAAGA TERM 5597 4278680 - 4278707 + g 74 -4.2 -4.69053 | gap 1, overlap 4278681 AAAACCTTCGGTACG GCTG-GCGACAAA CGC TTTGTCGTACAGG TTTTCTTCAATAATG TERM 5598 4278743 - 4278761 + g 71 -4.4 -4.57073 | overlap 4278745 CCCCATGGCGTTGAG CAGCGCGA TAT TCGAGCCG TTTTTCAACGCGATA TERM 5599 4279782 - 4279749 - R 100 -22.5 -3.55219 | gap 1 AACGCCAGGATAGAA CGGGCCGCGGCA-GGC AGT GCCATACCGCGGCCCG GCTTCAGAGGAGGCT lpxO 4280694 - 4279786 - | putative membrane-bound beta-hydroxylase TERM 5600 4280395 - 4280371 - G 72 -3.5 -4.68724 | CCATTTAAGATAAAA CCGTTTCCAGC CGC GCTTGAAAAAG GTGTTGAATCCGGCG phnO 4281407 - 4280952 - | aminoalkylphosphonic acid N-acetyltransferase phnB 4281980 - 4281537 - | hypothetical protein phnA 4282435 - 4282100 - | hypothetical protein TERM 5601 4283139 - 4283151 + G 70 -6.9 -4.1421 | overlap 4283140 TCCCTTCCTGATTCG TCCGC TCG GCGGG TTATTCTTTGGTATG TERM 5602 4284254 - 4284244 - g 77 -8.2 -4.08064 | overlap 4284245 AATCGTCCGTTAAAA GGCG CAA CGCC AGCGGCGTCGGACAT proP 4282903 - 4284405 + | proline/glycine betaine transporter TERM 5603 4284517 - 4284533 + T 72 -5.1 -4.6645 | overlap 4284518 ACGACCCTGTGTAGT GTGCTGA TTG TCAGCAG TTTTATCTATGTGTG TERM 5604 4284594 - 4284609 + T 77 -9 -3.96483 | opp_overlap 4284589, overlap 4284589 TTTTTCAACAGCACC CAGGCA CGGG TGCCTG TTCTTTCCGTACGGT pmrB 4285642 - 4284572 - | sensor protein BasS/PmrB TERM 5605 4284901 - 4284879 - G 72 -12 -2.82516 | overlap 4284887 4284888 TTTCGCAGCAGCATA CGCAGTAACG TTG CGTCACCGCG CACCACCACGTCCGC TERM 5606 4285290 - 4285342 + g 73 -5.5 -4.66833 | gap 1 TCAATCTCAAGCGTG GAGCTGTGAATGGCGATCGGCG TCAGATTATC CGCCGTCCGCGCTTC-CAGCTC TTTTTGCAGTTCGGC pmrA 4286320 - 4285652 - | DNA-binding transcriptional regulator BasR yjdB 4287960 - 4286317 - | putative cell division protein TERM 5607 4287242 - 4287212 - G 80 -9.1 -4.2074 | gap 1, opp_overlap 4287213, overlap 4287208 CCGCCAAGAGAGAAA TCATCGCCGCGCGA GGTT TCGC-CAACGATGA GAATCGTCAGGTTTT TERM 5608 4287713 - 4287689 - G 77 -4.1 -5.13343 | overlap 4287691 4287692 TAAGTCAAAATAAAA TACTGCGCGGC AGC GCCGACCAGAA TAAAAATGCAGGCCA TERM 5609 4287701 - 4287691 - G 70 -6.8 -4.17301 | overlap 4287689 4287692 AGTCAAAATAAAATA CTGC GCG GCAG CGCCGACCAGAATAA TERM 5610 4288041 - 4288066 + r 82 -13.3 -3.0634 | CTTAATGTTGGTGGT GGCCGGATAAC CTGC GCTATCCGGCC TGTTGCGATAACATT yjdE 4289431 - 4288094 - | arginine:agmatin antiporter adiY 4290332 - 4289571 - | AraC family regulatory protein TERM 5611 4290550 - 4290531 - R 100 -12.1 -5.60993 | TTTTGTATAAAAAAA GCGCGGG ATGGGG CCCGCGC AAAAAGGTATGACAG adi 4292897 - 4290630 - | arginine decarboxylase TERM 5612 4291985 - 4292002 + g 100 -7 -5.60993 | CAGCTTTGGTTTTGG TCAGCG GGCTGG CGCTGA TTTTTTTCTGCAAGG TERM 5613 4292597 - 4292609 + g 73 -5.5 -4.65895 | overlap 4292595 GTAGGTCGCGGTCCA GCGAT GCC GTCGC TTTTTCCCTGCCGCC TERM 5614 4293072 - 4293098 + r 80 -6.5 -4.8236 | TTTATAGCGAGCGAT TTCACCCGCCG TTTAT CGACAGGTGAA TTATTTTTTTGGCTG melR 4294062 - 4293130 - | DNA-binding transcriptional regulator MelR TERM 5615 4293769 - 4293756 - G 77 -3.7 -4.98531 | overlap 4293757 4293758 TCGGCAAACTAAAAA TCGCC ATCT GGCGG CAGTTGCCGGGGCGG TERM 5616 4294243 - 4294210 - H 74 -6 -4.56775 | opp_overlap 4294210 ATTTTGTCCCAAAAA CTCAGATCTTCCGC GCGTCA GCATACGATCTGAG TTTTCGGGAATGCTC melA 4294334 - 4295686 + | alpha-galactosidase TERM 5617 4296552 - 4296568 + G 93 -8.7 -4.74706 | CTACTTCACCTATGT GATTGGC GAT GCCGATC TTTTTCCCTATTACC TERM 5618 4296988 - 4297002 + G 73 -5.7 -4.41137 | opp_overlap 4296987, overlap 4296981 CAGTCTGCGCAAACC CTGCA GGGGA TGCAG TTTATTATGATTGTC melB 4295770 - 4297200 + | melibiose:sodium symporter TERM 5619 4297253 - 4297228 - T 82 -11.9 -3.30124 | gap 1 GTGCAGGCCGGATAA GCCGGATAAGCG TAG CGC-CATCCGGC AATTAACCGATAACG fumB 4298944 - 4297298 - | fumarate hydratase class I dcuB 4300380 - 4299040 - | anaerobic C4-dicarboxylate transporter TERM 5620 4299476 - 4299487 + g 80 -4.4 -5.0538 | GCAATCATACCGGAA CGAA AAAC TTCG TTTTTTGAGATAGAC SPA4120 4300793 - 4300527 - | hypothetical protein TERM 5621 4300620 - 4300640 + g 78 -6.9 -4.64024 | overlap 4300621 CAGTAAATTATGATT TGTCTGTTT TAA AAACAGGCG TTTATTATTTAATTT TERM 5622 4300954 - 4300940 - R 100 -11.4 -4.98531 | opp_overlap 4300942 TTTTGAAATTAAAAA CAGCGC ATG GCGCTG TAATAATAGAAAATA dcuR 4301829 - 4301110 - | DNA-binding transcriptional activator DcuR TERM 5623 4301645 - 4301672 + g 72 -11.4 -3.09193 | AGATCCAATCCGTTT TCCTGCTGCATA TAGA TATCCAGCAGGA TTAGGTCAATGTGAT TERM 5624 4303200 - 4303159 - H 86 -4.3 -5.50774 | gap 1, opp_overlap 4303176, overlap 4303161 CACAATAAACAAAAA GCCATTATGCTGGCTCACCG CTT CGGCGAGCG-GCTGAATGCC GCTTTCCGCAGGCGG TERM 5625 4303176 - 4303215 + H 100 -14.3 -5.0133 | gap 1, opp_overlap 4303161 4303159 CATTATGCTGGCTCA CCGCTT-CGGCGAGCGGC TGAAT GCCGCTTTCCGCAGGCGG TTTTTTCAGCCCCTC TERM 5626 4303390 - 4303359 - H 100 -10.2 -5.10933 | gap 1, opp_overlap 4303358 4303357, overlap 4303344 GCACCGAAAACAAAA CGGCGCTGACCATCA GAA TGACGGT-AGTGCCG AGTTTCATGGGGCGT TERM 5627 4303826 - 4303811 - H 100 -5.4 -5.96894 | ATGGAAATAAAAAAA TGGCTG AACA CAACCA TAACCCGACGTGATG TERM 5628 4305041 - 4305060 + H 74 -11.4 -2.82142 | opp_overlap 4305025, overlap 4305040 GGCAACTGGCCTTAC GGTACGCC GTAT GGCGTGCC ATTGTTGCCTGTCGG TERM 5629 4305792 - 4305808 + H 72 -6.5 -4.36914 | opp_overlap 4305783 4305792 CAGAAGGCGAGCGAA TTCCCGC ATT GCCGGAA TTTTGTCCAGCGAAA TERM 5630 4306077 - 4306121 + H 86 -14.2 -3.25942 | gap 1, overlap 4306102 TTTTACCCGGCGTGG CGGCGATGCCG-CAGGGCGCG TGGA CGCGGCTTGACGGCAACGGCG TTGATGTCGGCGGCT dmsB 4306239 - 4306865 + | anaerobic dimethyl sulfoxide reductase subunit B TERM 5631 4306902 - 4306914 + G 71 -6.2 -4.36554 | overlap 4306901 GGTCTTTACCCAGAG CGCG GTCGG CGCG TTTATTCTGCTGCTG dmsC 4306858 - 4307631 + | anaerobic dimethyl sulfoxide reductase chain C TERM 5632 4307994 - 4308007 + G 76 -3.1 -5.0538 | gap 1 ATGGGGGAAACCACC GC-CGA TTA TCGAGC TTTTTTACAGTCGCA SPA4126 4307613 - 4308317 + | hypothetical protein TERM 5633 4308346 - 4308373 + T 80 -12.7 -2.95073 | overlap 4308343 4308346 TGCTTGTGTCGCCAT CGTGCCCGCTG TTGCGT CAGCGGGCACA GTTTACTATTACAGC TERM 5634 4308346 - 4308374 + T 95 -12.5 -3.92592 | gap 1, overlap 4308343 4308346 TGCTTGTGTCGCCAT C-GTGCCCGCTG TTGCGT CAGCGGGCACAG TTTACTATTACAGCT SPA4127 4309782 - 4308382 - | hypothetical protein TERM 5635 4310112 - 4310087 - g 74 -7.5 -4.16842 | opp_overlap 4310086, overlap 4310088 TTTATTTTTAAGAAA TGCGTTACGAC ATCA GTCGTGACGCG ATCTGCTATGGATTT TERM 5636 4310111 - 4310088 - g 72 -11 -3.09784 | opp_overlap 4310086, overlap 4310087 TTATTTTTAAGAAAT GCGTTACGAC ATCA GTCGTGACGC GATCTGCTATGGATT TERM 5637 4310704 - 4310694 - g 76 -5.4 -4.79826 | AGAGATGAGCAAAAA TGGT ATC ACCA GAGCGTTGCCTTCTG SPA4128 4310086 - 4310991 + | hypothetical protein TERM 5638 4311160 - 4311179 + T 100 -10.7 -6.24157 | GTCCTCCTCATATTT GCGGCAG CGTAGT CTGCCGC TTTTTTTTTATAAAT SPA4129 4311629 - 4311279 - | hypothetical protein SPA4130 4311847 - 4311650 - | hypothetical protein TERM 5639 4311685 - 4311719 + g 93 -13 -3.99374 | opp_overlap 4311696 TCGGTGTATTGATGT TAGTGATATTATCGCC TCC GGCGCCAATATCACTA TTATTCTTCATGGAA SPA4131 4312157 - 4311870 - | GerE family regulatory protein SPA4132 4313029 - 4312154 - | AraC family transcription regulator TERM 5640 4313094 - 4313069 - R 72 -2.7 -4.98531 | overlap 4313062 4313072 4313084 CGTGTAAATCAAAAA TTATTCTGAAA AATA TTTCAAAAGAA AACTAATATATAGCT SPA4133 4313513 - 4313295 - | hypothetical protein TERM 5641 4313959 - 4313941 - g 74 -4.5 -4.71061 | overlap 4313943 AGCCAGAGGGAAAAA CCGCACA GACTT TGTGCTG GAAGCTGCCCGTGCT SPA4134 4313834 - 4314127 + | hypothetical protein SPA4135 4314124 - 4314615 + | putative acetyltransferase TERM 5642 4314788 - 4314774 - T 71 -7.1 -4.06055 | ATCGGGGAAACCAAA GGCGT TCTCC ACGCC CGGTCGCCCCTACGC phoN 4315608 - 4314856 - | nonspecific acid phosphatase precursor TERM 5643 4316311 - 4316282 - R 90 -14.5 -3.22906 | gap 1, opp_overlap 4316288, overlap 4316288 CCATTCCCAGAAAAG CA-AAAACCCAGCC ATA GGCTGGGTTTTCTG AATAAGTGGTGCCCG TERM 5644 4316288 - 4316304 + r 100 -13.7 -4.431 | opp_overlap 4316282 4316288 CCAGAAAAGCAAAAA CCCAGCC ATA GGCTGGG TTTTCTGAATAAGTG TERM 5645 4316304 - 4316288 - R 100 -13.7 -5.1417 | opp_overlap 4316288, overlap 4316282 CCAGAAAAGCAAAAA CCCAGCC ATA GGCTGGG TTTTCTGAATAAGTG TERM 5646 4316351 - 4316367 + r 73 -10.9 -2.62616 | opp_overlap 4316350 4316348 4316345 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yjdC 4317084 - 4316509 - | putative transcriptional regulator dipZ 4318824 - 4317121 - | thiol:disulfide interchange protein precursor TERM 5647 4317959 - 4317948 - G 81 -3.6 -5.18726 | opp_overlap 4317956, overlap 4317950 CCCCCATAACAAAAA CACC GCCG GGCG AGCCGCCTTGCTGAC TERM 5648 4318729 - 4318717 - G 74 -2.6 -5.02421 | overlap 4318719 AAAATCAAAAACAAA CGCC CGGTC GGCA GGGACGAACTGCGAG cutA 4319147 - 4318800 - | divalent-cation tolerance protein CutA TERM 5649 4319257 - 4319235 - R 93 -14.8 -3.30635 | overlap 4319236 CAAAGGGCGGGAGAA TGCGGGGCGT GAT ACGCCCCGCG GGTGAAACACTTACA TERM 5650 4319256 - 4319236 - R 100 -18.3 -2.5806 | overlap 4319235 AAAGGGCGGGAGAAT GCGGGGCGT GAT ACGCCCCGC GGGTGAAACACTTAC dcuA 4320569 - 4319268 - | anaerobic C4-dicarboxylate transporter TERM 5651 4320639 - 4320663 + r 95 -12.9 -3.79251 | opp_overlap 4320641, overlap 4320641 CTTCTTGTAAGAAAA AAGGCACGTCA TCG TGACGTGCCTC TTTGGTACTACCCTG TERM 5652 4320661 - 4320641 - R 100 -15.5 -5.4505 | opp_overlap 4320639 4320641 TCTTGTAAGAAAAAA GGCACGTCA TCG TGACGTGCC TCTTTGGTACTACCC TERM 5653 4320641 - 4320661 + r 100 -15.5 -3.48024 | opp_overlap 4320641, overlap 4320639 TCTTGTAAGAAAAAA GGCACGTCA TCG TGACGTGCC TCTTTGGTACTACCC aspA 4322120 - 4320684 - | aspartate ammonia-lyase TERM 5654 4321549 - 4321561 + g 74 -7.7 -4.13282 | overlap 4321540 ACGGCGTCCTGCAAC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 5655 4321984 - 4321999 + g 74 -3.2 -4.92757 | opp_overlap 4321984, overlap 4321979 ATGCCACGCACAAAT TCAGGG ATGT CGCTGA TTTTGTTATTGCTAA SPA4143 4322275 - 4322153 - | hypothetical protein TERM 5656 4322423 - 4322441 + H 73 -11 -2.52464 | opp_overlap 4322423 GCAACCCCATTCAAA TGGTCGTC GCA GACGGCCA TGACTTACAGGAGAG TERM 5657 4322441 - 4322423 - H 76 -8.8 -3.66874 | opp_overlap 4322423 GCAACCCCATTCAAA TGGTCGTC GCA GACGGCCA TGACTTACAGGAGAG TERM 5658 4322612 - 4322622 + G 72 -4 -4.77036 | TGGTACGTAACCAGG GTTT TAA AAAC TTTTTGCTGATGCAA TERM 5659 4322644 - 4322622 - g 75 -6.4 -4.57569 | overlap 4322623 CCAGGGTTTTAAAAA CTTTTTGCTG ATG CAACAAAAAA TGGCGGCCGGTGAGA TERM 5660 4322670 - 4322645 - g 85 -2.5 -5.4833 | gap 1, overlap 4322646 4322647 TGATGCAACAAAAAA TGGCGGCCGG TGAGAGC CCGGCGGC-A GAAATGATTAAGAGT TERM 5661 4322714 - 4322727 + G 71 -4.5 -4.61527 | overlap 4322723 TCGCTGGCTTACTGC TCCTG TTGC CGGGA TTTTTCACCGATTTT fxsA 4322461 - 4322937 + | FxsA yjeH 4324237 - 4322996 - | inner membrane protein YjeH TERM 5662 4324355 - 4324367 + H 74 -3.3 -5.08824 | opp_overlap 4324355 AACGTGAGATAAGTA GCGTT TTT ACCGC TTTTTTCGCTCAGAA groES 4324513 - 4324806 + | co-chaperonin GroES TERM 5663 4325861 - 4325833 - g 74 -9.5 -3.72374 | overlap 4325831 TGTGATCAACAAAGA CACCACCACCATC ATT GATGGCGTGGGTG AAGAAGCTGCCATCC groEL 4324850 - 4326496 + | chaperonin GroEL TERM 5664 4326633 - 4326668 + F 100 -18.4 -4.37971 | opp_overlap 4326639, overlap 4326639 TTATCTCCCAGAATT GAGAAACCCCCGGGCA GAAA TGACCGGGGGTTTTTC TTTTAGTCATCTTTT TERM 5665 4326662 - 4326639 - f 100 -13.8 -4.00066 | opp_overlap 4326633 4326639 CCCAGAATTGAGAAA CCCCCGGGCA GAAA TGACCGGGGG TTTTTCTTTTAGTCA TERM 5666 4326639 - 4326662 + F 100 -13.8 -5.50723 | opp_overlap 4326639, overlap 4326633 CCCAGAATTGAGAAA CCCCCGGGCA GAAA TGACCGGGGG TTTTTCTTTTAGTCA yjeI 4326722 - 4327093 + | hypothetical protein TERM 5667 4327096 - 4327146 + T 100 -10.7 -4.7373 | gap 2, overlap 4327098 4327107 4327109 ATGTCCGAATTGATA TGTCTGAATCGTAACGCCCTCTGAA AGA TTCAGAGGGCGATATGGTT-AG-CG TTTTTCCTGCGATGA TERM 5668 4327098 - 4327145 + T 85 -12.2 -3.43756 | gap 1, overlap 4327096 4327107 4327109 GTCCGAATTGATATG TCTGAATCGTAACGCCCTCTGAA AGA TTCAGAGGGCGATATGGTT-AGC GTTTTTCCTGCGATG TERM 5669 4327107 - 4327137 + T 100 -17 -2.79809 | overlap 4327098 4327096 4327109 GATATGTCTGAATCG TAACGCCCTCTGAA AGA TTCAGAGGGCGATA TGGTTAGCGTTTTTC TERM 5670 4327109 - 4327135 + T 93 -15.2 -2.93361 | overlap 4327107 4327098 4327096 TATGTCTGAATCGTA ACGCCCTCTGAA AGA TTCAGAGGGCGA TATGGTTAGCGTTTT yjeJ 4327998 - 4327141 - | hypothetical protein TERM 5671 4328234 - 4328248 + r 71 -3.6 -4.77438 | GGAATCTCCTCGTGA TATTGC GCG GTAATA TTTTTCGTCGTCCCT yjeK 4329308 - 4328280 - | hypothetical protein TERM 5672 4328867 - 4328886 + g 74 -10 -3.75598 | CGGCGATATACTCCA GCGCGACT GTCC AGTTGCGC TTATTGCCTTGATTC TERM 5673 4329148 - 4329136 - G 78 -6.9 -4.63486 | overlap 4329137 4329138 ATGCGCGCAATAAAA GCGCG CGG CACGC GGAGGGCAAACAAGC efp 4329349 - 4329915 + | elongation factor P TERM 5674 4329935 - 4329956 + F 80 -12.3 -3.01831 | opp_overlap 4329935, overlap 4329932 4329930 CGTTATCGGGAAAAA TGGTGCAGC GTAT GCTGCGCCA TCCTATTTTTCGCGC TERM 5675 4329956 - 4329935 - f 93 -10.1 -4.59773 | opp_overlap 4329932 4329930 4329935 CGTTATCGGGAAAAA TGGTGCAGC GTAT GCTGCGCCA TCCTATTTTTCGCGC ecnA 4329977 - 4330111 + | entericidin A precursor TERM 5676 4330303 - 4330289 - g 72 -11.4 -3.02461 | overlap 4330292 TAACTGCTTGTAATA CCACGC GCG GCGTGG GCGAGGACATCTCGG ecnB 4330219 - 4330365 + | entericidin B membrane lipoprotein TERM 5677 4330366 - 4330403 + T 79 -8.6 -4.36914 | gap 1, opp_overlap 4330369 4330373, overlap 4330373 AGAGCTCAGCAGTAA TC-ATCAACGGTACGGC ATGGC GTCGTACCGTTAATCGA TTTTCTCCGGAAGCA TERM 5678 4330399 - 4330369 - T 74 -11.2 -2.80016 | opp_overlap 4330366 4330373, overlap 4330373 GCTCAGCAGTAATCA TCAACGGTACGGCA TGG CGTCGTACCGTTAA TCGATTTTCTCCGGA TERM 5679 4330395 - 4330373 - T 71 -9.8 -3.29364 | opp_overlap 4330373 4330366, overlap 4330369 AGCAGTAATCATCAA CGGTACGGCA TGG CGTCGTACCG TTAATCGATTTTCTC TERM 5680 4330373 - 4330395 + T 77 -11.3 -3.28857 | opp_overlap 4330369 4330373, overlap 4330366 AGCAGTAATCATCAA CGGTACGGC ATGGC GTCGTACCG TTAATCGATTTTCTC ecnR 4330983 - 4330396 - | transcriptional regulatory protein sugE 4331239 - 4331556 + | quaternary ammonium compound-resistance protein SugE blc 4332106 - 4331573 - | outer membrane lipoprotein Blc TERM 5681 4332086 - 4332068 - G 100 -8.8 -4.93365 | overlap 4332079 GGCGACAATCAAAAA TGCCGCAG TAA CCGCAGCA ACGACGGGCAGCAAG TERM 5682 4332207 - 4332179 - R 100 -11.8 -5.83211 | overlap 4332180 CAGGAAAAGAAAAAA TGCCCTCTTATC GGGTA GATAAGAGGGCG TCGTGGCAACTTAGA TERM 5683 4332206 - 4332180 - R 100 -15.3 -4.07486 | overlap 4332179 AGGAAAAGAAAAAAT GCCCTCTTATC GGGTA GATAAGAGGGC GTCGTGGCAACTTAG frdD 4332577 - 4332218 - | fumarate reductase subunit D TERM 5684 4332444 - 4332426 - G 70 -6.6 -4.08945 | overlap 4332427 4332430 AGTACGCGCTCAAAA CTCAGGGC ATC GCCCGGAA ATAGCCCCAGTGGCA TERM 5685 4332507 - 4332475 - G 76 -12.7 -2.74012 | GCATGATGCCAACCA GTAGCACGATCACCG GCG CGATGATCGCGCCCC ACATACCGCCTGCGC frdC 4332983 - 4332588 - | fumarate reductase subunit C frdB 4333728 - 4332994 - | fumarate reductase iron-sulfur subunit frdA 4335511 - 4333721 - | fumarate reductase flavoprotein subunit TERM 5686 4335901 - 4335916 + G 75 -6.8 -4.42806 | overlap 4335902 AACGTGCGGCGATTA TGACGG AAAT CCGTCG TTTCTTTGCCGATCG yjeA 4335834 - 4336811 + | lysyl-tRNA synthetase TERM 5687 4336858 - 4336842 - f 86 -9.4 -4.52589 | opp_overlap 4336842 TTTCGCGAGATAAAA TGGCGC AATAA GCGCCA TTTTGTAGCATATTT TERM 5688 4336842 - 4336858 + F 86 -9.4 -4.43221 | opp_overlap 4336842 TTTCGCGAGATAAAA TGGCGC AATAA GCGCCA TTTTGTAGCATATTT TERM 5689 4337078 - 4337057 - g 90 -4.4 -5.34555 | opp_overlap 4337062 CCACACGATAAAAAA GATGAGCC TTATTG GGCTTATC CTGATGATTTTTACT TERM 5690 4337170 - 4337180 + G 85 -2.4 -5.5074 | CGTGGTATATATTTT CTGC CTT GCTG TTTTTTATTCCATTC TERM 5691 4337278 - 4337288 + G 71 -8.2 -3.8709 | overlap 4337269 ATAATAGCGTGGGGC CGCG TTA CGCG TTTATCGGCACGTTT TERM 5692 4337563 - 4337577 + G 80 -5 -4.91084 | ATTTGGTTTTATTGT TAGTGA GTG TCGCTA TTTTGTTATTAAATG TERM 5693 4337760 - 4337742 - g 72 -2.4 -4.89729 | overlap 4337734 4337743 GATAAAACCGAAAAA CCGGAAAA GAA TTTTGCGA AAGGCATTGTCTTCG TERM 5694 4338443 - 4338458 + G 73 -9 -3.82824 | CAGCGCCTTGTGGAT GATCGG CGGC CCGATC TTCTTCTCGCTGCTG yjeM 4337037 - 4338539 + | putative amino acid permease TERM 5695 4338548 - 4338580 + G 91 -11.9 -4.19678 | opp_overlap 4338541 4338558, overlap 4338549 GGAGTAAAGGCCGTA TGCCGGATAAGGCCC CAC GGGTCGCATCCGGCG TTTATTGCCCTATGG TERM 5696 4338549 - 4338579 + G 84 -13.2 -3.11325 | opp_overlap 4338541 4338558, overlap 4338548 GAGTAAAGGCCGTAT GCCGGATAAGGCCC CAC GGGTCGCATCCGGC GTTTATTGCCCTATG yjeN 4338547 - 4338924 + | hypothetical protein TERM 5697 4339008 - 4339040 + T 73 -7.5 -4.1552 | opp_overlap 4338995 4339018 4339020, overlap 4339009 AATTGTCGGCCCGTA GGCCGGATAAGACCC GAC GGGGCGCATCCGGCA TTTCTTGCCGGGATC TERM 5698 4339009 - 4339039 + T 75 -11 -3.08991 | opp_overlap 4338995 4339018 4339020, overlap 4339008 ATTGTCGGCCCGTAG GCCGGATAAGACCC GAC GGGGCGCATCCGGC ATTTCTTGCCGGGAT TERM 5699 4339081 - 4339068 - T 74 -8.1 -3.87075 | opp_overlap 4339064 4339071 ATCATGCGCTACAAA CTCCC CGCC GGGAG GCTGGTTTTACCCGC TERM 5700 4339350 - 4339338 - T 71 -6.9 -4.04927 | overlap 4339341 TCAAGCACCAAAGAA CAGCG CTG CGCCG CCGTCAGCAGAATTT TERM 5701 4339577 - 4339592 + T 79 -9 -4.07885 | AATGGTCACCGTATC GCCGAT ACGA ATCGGC TTTTCAAACAAAATA TERM 5702 4340425 - 4340437 + T 100 -10.5 -5.03314 | opp_overlap 4340425 4340423 4340421 4340419 CTTTATCAAGATAGA GCGGG ATG CCCGC TTTTTTCAGACTCAG TERM 5703 4340437 - 4340425 - T 74 -10.5 -3.12449 | opp_overlap 4340425, overlap 4340423 4340421 4340419 CTTTATCAAGATAGA GCGGG ATG CCCGC TTTTTTCAGACTCAG TERM 5704 4340976 - 4340995 + T 72 -8.6 -3.67564 | AGCGTCTCTTTGCTG GTCAGCAT CATG ATGCTGGC TTTACCTAACTGATT TERM 5705 4341904 - 4341950 + T 77 -7.3 -4.4261 | CGGCACTTCCGCCTG CGGCGCCGAGTCGTC-GCTCAAT CTC ATTAAGCTGGCGGCG-GGCGTCG TTTTGCTGTTGGGGA psd 4343374 - 4342406 - | phosphatidylserine decarboxylase yjeQ 4344518 - 4343466 - | ribosome-associated GTPase orn 4344625 - 4345170 + | oligoribonuclease TERM 5706 4345214 - 4345180 - T 75 -11.5 -3.04144 | gap 1 CTGTGAGGCGTAACA TGCCGGATGGCAACGC CAGA GCGTCTC-ATCCGGCA GCTCTCCCGCCACTG artJ 4345951 - 4345232 - | arginine-binding periplasmic protein TERM 5707 4346290 - 4346274 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGGCGCGAGTTCGA TERM 5708 4346522 - 4346506 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5709 4346580 - 4346566 - RH 72 -8.6 -3.76413 | CTCCAAAATTTGAAA GTGCTT GTT AAGCAC AGACCACCAATCGCA TERM 5710 4346754 - 4346738 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA yjeS 4348196 - 4347057 - | putative 4Fe-4S binding protein TERM 5711 4348539 - 4348561 + GH 73 -11.3 -2.58822 | overlap 4348522 4348538 4348536 TGCCTGGCTGAATGC CGGCGGCAT TATCC ATGCTGCCG ATATTATCTGGCCGG TERM 5712 4348877 - 4348889 + GH 71 -10.5 -2.71712 | overlap 4348840 TGGCGAGCCAGACGC CGCCG CTC CGGCG CTTTGACGCGACGCA yjeF 4348195 - 4349742 + | hypothetical protein TERM 5713 4349915 - 4349892 - gf 72 -3.8 -4.74504 | ACGGTAATGTAAAAA GCCCCACC TATACGCT GGTAGAGC CTTATGCGCTTGATA yjeE 4349714 - 4350175 + | putative ATPase TERM 5714 4350458 - 4350442 - g 83 -7.9 -4.60255 | ACAATCTGGTAAAAA CGATCCG TGC CGGAACG CCGAAAGATGCGCAA amiB 4350192 - 4351514 + | N-acetylmuramoyl-l-alanine amidase II TERM 5715 4351576 - 4351564 - g 73 -9.1 -3.90291 | opp_overlap 4351570 AGCTTGCGAACCAAA TCGCC GCT GGCGA AGTGGTGGAACGCCC TERM 5716 4351746 - 4351719 - g 79 -3.2 -5.14563 | overlap 4351722 TGCGGCATTAAAAAA GAGGAGCTGGCG CTGG CGCTGGCCCGTC ATGCCACCAGTAAAA TERM 5717 4352165 - 4352148 - g 71 -4.8 -4.60889 | gap 1, overlap 4352150 AAGGACGGGCAAAAA GAGCGCC GATTA GGCGC-C ATCTGCGGCACGCCG TERM 5718 4352164 - 4352150 - g 71 -8.5 -3.91506 | overlap 4352148 GGACGGGCAAAAAGA GCGCC GATTA GGCGC CATCTGCGGCACGCC mutL 4351524 - 4353380 + | DNA mismatch repair protein miaA 4353373 - 4354323 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 5719 4354434 - 4354461 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4354433 4354430, overlap 4354427 AATCTTTACAAGATC CGTTCCTGAACGC ATT GCGT-CGGGAACG TGTTCCAGTTTCTAT hfq 4354406 - 4354714 + | RNA-binding protein Hfq TERM 5720 4355531 - 4355558 + G 74 -10.6 -3.53563 | TCGGTGAAACCGTTC TGGCGGATACGG TAGG CTTTATCCGCCA TTTACCGCACGATCT TERM 5721 4355831 - 4355794 - g 70 -5 -4.4768 | gap 3, opp_overlap 4355825 GATGAAGAGAATAAA CCCA-TCCGCGTTTG-GCT TTC AGCGCAAA-GCGGCGTGGG GATACCACAGCTTTT TERM 5722 4355882 - 4355897 + G 74 -10.4 -3.53012 | opp_overlap 4355891, overlap 4355881 TTTCCGGCGAGGTGG CGCAGC ATAC GCTGCG TTTGCCGCCGCAGGA hflX 4354786 - 4356066 + | putative GTPase HflX TERM 5723 4357512 - 4357493 - g 83 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC GAAT GCGCAGCG TAACGACTACCAGCG hflK 4356281 - 4357540 + | FtsH protease regulator HflK TERM 5724 4357624 - 4357640 + G 77 -7.2 -4.28762 | GTCAAAGAGGGCGAG CGCGGC ATTAC GCTGCG TTTTGGTAAAGTTCT hflC 4357543 - 4358547 + | FtsH protease regulator HflC TERM 5725 4358573 - 4358608 + F 100 -14.2 -4.37092 | gap 1, opp_overlap 4358578, overlap 4358578 GCGGTTTTAGACCAG CAAAACCACCG-CATCC AAA GGATGCCGGTGGTTTTC TTTTATAAGGGCGAT TERM 5726 4358578 - 4358603 + F 100 -14.1 -5.18371 | gap 1, opp_overlap 4358578, overlap 4358573 TTTAGACCAGCAAAA CCACCG-CATCC AAA GGATGCCGGTGG TTTTCTTTTATAAGG TERM 5727 4358603 - 4358578 - f 100 -14.1 -4.33274 | gap 1, opp_overlap 4358573 4358578 TTTAGACCAGCAAAA CCACCG-CATCC AAA GGATGCCGGTGG TTTTCTTTTATAAGG yjeT 4358626 - 4358823 + | hypothetical protein TERM 5728 4359296 - 4359286 - g 71 -8.2 -3.86194 | overlap 4359273 4359287 AACGCGCGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 5729 4359441 - 4359409 - g 73 -5.6 -4.56775 | opp_overlap 4359409 4359431, overlap 4359432 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4358926 - 4360224 + | adenylosuccinate synthetase TERM 5730 4360279 - 4360313 + F 78 -11.6 -3.10975 | gap 1 CAGTGTGATACATTG CTGTGTCGGGTAAGC CATTAC GCT-ATCCGACACAG TGTTAAATCCTCGCT TERM 5731 4360630 - 4360616 - g 86 -7 -5.00616 | overlap 4360617 CGTTCGGGGAAAAAA TGGCGG TAT CCGCCT GGGTAAACCGGCTAA TERM 5732 4360629 - 4360617 - g 74 -10.5 -3.60048 | overlap 4360616 GTTCGGGGAAAAAAT GGCGG TAT CCGCC TGGGTAAACCGGCTA yjeB 4360431 - 4360856 + | transcriptional repressor NsrR TERM 5733 4361018 - 4360993 - g 81 -6.8 -4.71482 | overlap 4360994 ACGAAACGTGAAAAA CCGGCCAGTC GCGAAG AACTGGCCGT AGAACTGAATATTGA TERM 5734 4361017 - 4360994 - g 73 -10.3 -3.41804 | overlap 4360993 CGAAACGTGAAAAAC CGGCCAGTC GCGAAG AACTGGCCG TAGAACTGAATATTG TERM 5735 4361156 - 4361183 + G 77 -7.8 -4.23213 | gap 1, opp_overlap 4361153 4361156 ACCTGCTGAAAGGCA CCGTGATCGGTCA TCG TGA-CGGTTACGG TTTCTTACGTGTCGA TERM 5736 4363154 - 4363140 - g 76 -2.7 -4.99134 | AGGTGAAAGTAAAAA CGCCG GTAAA CGTCG TCAGGTAGGTAAAAA TERM 5737 4363294 - 4363280 - g 71 -4.2 -4.54477 | overlap 4363282 CTAAAACGCAGAAAA TAGCCG CAG CGACCA AAGCGAAGCGTGCGG rnr 4360894 - 4363332 + | exoribonuclease R TERM 5738 4363359 - 4363339 - f 77 -11.2 -3.16492 | opp_overlap 4363336 4363335 4363339, overlap 4363337 GCAGAGTGAGCAATA CCCTCTTC AAACA GAAGAGGG TGAATTATCTGTAGG TERM 5739 4363339 - 4363359 + F 73 -11.2 -2.64877 | opp_overlap 4363339 4363337, overlap 4363336 4363335 GCAGAGTGAGCAATA CCCTCTTC AAACA GAAGAGGG TGAATTATCTGTAGG TERM 5740 4363542 - 4363567 + G 74 -11.1 -3.31144 | overlap 4363543 TCTGTTGCCGCTGAT TCACGCCCTTG AGTC CCAGGGCGTGG TTATCCAGCTGGCAA TERM 5741 4363543 - 4363566 + G 72 -12.4 -2.58544 | overlap 4363542 CTGTTGCCGCTGATT CACGCCCTTG AGTC CCAGGGCGTG GTTATCCAGCTGGCA TERM 5742 4363637 - 4363607 - g 73 -6 -4.4648 | opp_overlap 4363607 4363614 ATCTCGACGAGAAAA GCGACGGTGCCGTG CAT CAGGGCATTATCGC TCGTGTGAAACCAGG yjfH 4363423 - 4364154 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 5743 4364171 - 4364208 + F 84 -13.8 -2.92642 | opp_overlap 4364166 4364181, overlap 4364181 GCTAATAGTATTTTT TAAGAAAAAACCATCC ATAATC GGATGGTTTTTTTTTA TCTCTGGCTGGTAAT TERM 5744 4364198 - 4364181 - f 95 -7.7 -5.4505 | opp_overlap 4364171 4364181 TTTTTTAAGAAAAAA CCATCCA TAAT CGGATGG TTTTTTTTTATCTCT TERM 5745 4364181 - 4364198 + F 100 -7 -6.32216 | opp_overlap 4364181, overlap 4364171 TTTTTTAAGAAAAAA CCATCC ATAATC GGATGG TTTTTTTTTATCTCT TERM 5746 4364372 - 4364357 - g 71 -4.8 -4.61868 | TATTGATATAGAAAA TAATGA ATCT TCATTA ATAATAAAAATGAAT yjfI 4364286 - 4364690 + | hypothetical protein yjfJ 4364705 - 4365403 + | putative Phage shock protein A, IM30, suppresses sigma54-dependent transcription SPA4189 4365403 - 4365510 + | hypothetical protein TERM 5747 4365486 - 4365496 + F 74 -6.8 -4.33417 | overlap 4365495 GGGCCTGTTTATCGG GCAG TAT CTGC TTTGTTATCGGTAGC TERM 5748 4365699 - 4365688 - g 74 -7.2 -4.17048 | TGCTCGGTAAAACAA GCGC GCCA GCGC CGATTCGCGGACCAT TERM 5749 4366046 - 4366058 + G 100 -9.1 -5.03314 | opp_overlap 4366045 4366044 CAACTGGCAAGAACG GCGCT GGC AGCGC TTTTTTAACCATGAA yjfK 4365627 - 4366310 + | hypothetical protein yjfL 4366328 - 4366726 + | hypothetical protein TERM 5750 4366870 - 4366882 + G 90 -4.7 -5.31275 | GACGCTGGCGATTAT GGGCG GAG CGGCC TTTTTTCTCCTGAAA yjfM 4366736 - 4367374 + | hypothetical protein yjfC 4367377 - 4368540 + | hypothetical protein TERM 5751 4369553 - 4369563 + G 70 -6.8 -4.18762 | GGAGTCATGGCTTAA TGCG GCG CGCA TTTTCAGTCGCCATT aidB 4368607 - 4370247 + | isovaleryl CoA dehydrogenase yjfN 4370631 - 4370311 - | hypothetical protein yjfO 4371046 - 4370717 - | hypothetical protein TERM 5752 4371939 - 4371958 + G 71 -4.2 -4.56775 | opp_overlap 4371939 GCATTACGCCAGAAG CGTTGTCG GCGA CGGTAGCG TTTTTCCGACAGCAT yjfP 4371230 - 4371979 + | esterase yjfQ 4372731 - 4371976 - | transcriptional repressor UlaR TERM 5753 4372563 - 4372578 + g 85 -4.6 -5.2696 | overlap 4372564 GTTGGGTAATGGCCT CTGCGC CGTT GCGCAC TTTTTTAAGTTTTCC TERM 5754 4372808 - 4372825 + r 78 -12.7 -2.63596 | opp_overlap 4372808 AGTAAATGGAAAAAA TGCCGGG TAAT CCCGGCA TGATATCGACTCACA TERM 5755 4372825 - 4372808 - R 100 -12.7 -5.22943 | opp_overlap 4372808 AGTAAATGGAAAAAA TGCCGGG TAAT CCCGGCA TGATATCGACTCACA yjfR 4373900 - 4372836 - | putative L-ascorbate 6-phosphate lactonase ulaA 4374263 - 4375660 + | ascorbate-specific PTS system enzyme IIC sgaB 4375676 - 4375981 + | L-ascorbate-specific enzyme IIB component of PTS sgaA 4375991 - 4376455 + | L-ascorbate-specific enzyme IIA component of PTS TERM 5756 4377125 - 4377093 - g 81 -11.9 -3.60627 | opp_overlap 4377091 GCACGGCAGTTCAAA CGCTCCATTGCCCAA CTG TGGGGCTAAGGAGCG GCTATGCTGTCGAAA ulaD 4376469 - 4377119 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 5757 4377188 - 4377168 - g 90 -8.2 -4.7497 | GGCATCTATGAAAAA GCGCTCCC TGCCG GGGAGTGC TGGCTGGAGCGCCTG sgaU 4377129 - 4377983 + | L-xylulose 5-phosphate 3-epimerase sgaE 4377983 - 4378669 + | L-ribulose-5-phosphate 4-epimerase TERM 5758 4378761 - 4378744 - T 100 -12.7 -5.00616 | CTTTCCGCGAAAAAA GCCCCCT GTTC AGGGGGC AAATCAACTATGGCT yjfY 4379073 - 4378798 - | hypothetical protein SPA4207 4379267 - 4379473 + | hypothetical protein rpsF 4379544 - 4379939 + | 30S ribosomal protein S6 priB 4379946 - 4380260 + | primosomal replication protein N rpsR 4380265 - 4380492 + | 30S ribosomal protein S18 rplI 4380534 - 4380983 + | 50S ribosomal protein L9 TERM 5759 4381009 - 4381039 + F 100 -11.9 -5.09895 | opp_overlap 4381010 4381015, overlap 4381010 TCGTTTTTGCTAGCA ACAAAACGTCGGC CCAGC GCCGGCGTTTTGC TTTTTTAACTCCATC TERM 5760 4381038 - 4381010 - f 83 -13.2 -3.14132 | opp_overlap 4381009 4381010, overlap 4381015 CGTTTTTGCTAGCAA CAAAACGTCGGC CCAGC GCCGGCGTTTTG CTTTTTTAACTCCAT TERM 5761 4381010 - 4381038 + F 100 -15.4 -3.65214 | opp_overlap 4381010 4381015, overlap 4381009 CGTTTTTGCTAGCAA CAAAACGTCGGC CCAGC GCCGGCGTTTTG CTTTTTTAACTCCAT TERM 5762 4381033 - 4381015 - f 80 -7.3 -4.71426 | opp_overlap 4381010 4381009, overlap 4381010 TTGCTAGCAACAAAA CGTCGGC CCAGC GCCGGCG TTTTGCTTTTTTAAC TERM 5763 4381114 - 4381100 - f 70 -2.2 -4.93365 | CGCGATAATCAAAAA TAAAAC ATT ATTTTA ATTTCTTGGTGAAAG TERM 5764 4381183 - 4381193 + G 70 -3.2 -4.69053 | AAAACGTCGTTTATG TGTG TGC CGCA TTTTGTTGCCTGCTA yifZ 4381131 - 4382057 + | hypothetical protein TERM 5765 4382066 - 4382045 - T 79 -10.2 -3.61398 | TTGGTGGGTGAATAA GGTGAAGC GGTAAT GCTTCACC TGAACGAATAGGGTA ytfB 4382742 - 4382107 - | hypothetical protein TERM 5766 4382906 - 4382933 + H 79 -4 -5.21709 | gap 1, opp_overlap 4382909, overlap 4382909 AAAGTTTTACCAGAA GAAGCGTGGCTGT TAT GCTGCC-CGCTAC TTTTTTGATATCCGA fklB 4382962 - 4383582 + | peptidyl-prolyl cis-trans isomerase TERM 5767 4383591 - 4383631 + F 95 -17 -2.52676 | gap 1, overlap 4383606 TCTGTAAGCGCCCCG GGTTTGCCGGATGATGGCG TAAA CGCC-TTATCCGGCAACCC TGACTTCAGCAGATG TERM 5768 4383907 - 4383896 - g 71 -5.8 -4.22652 | GTAGATCAGGTAAAA GTCG CAGC CGAC GAACAGGCTCCGGCT TERM 5769 4384622 - 4384607 - g 73 -5.4 -4.62904 | gap 1 AAAGATCCGGAAAAA TCGCTGC CGC GC-GCGA TCAACTCAATACCGA cycA 4383878 - 4385281 + | D-alanine/D-serine/glycine permease TERM 5770 4386721 - 4386695 - g 71 -10.8 -3.16071 | overlap 4386693 4386691 CCCGATATTAACAGA GTGGACGACGGT ATC ACCAGCGCCCAC TGACGTTATCTCTTT SPA4216 4385619 - 4386758 + | hypothetical protein TERM 5771 4387164 - 4387141 - T 72 -6 -4.46581 | GAAAATCGTACAAAA TCCACCGG GTAAGCCG CCAGTGGA TGCAGCGACTTTTCG TERM 5772 4387488 - 4387499 + T 73 -2.2 -5.15167 | gap 1, overlap 4387488 ACACTATTCTACGTA CC-GC CAC GCAGG TTTTTGTTAATGGTG TERM 5773 4388216 - 4388183 - T 73 -9.8 -3.36327 | opp_overlap 4388187, overlap 4388187 TTAGTCGATTCAGAA TAAACGATCCTG TCTATACGTT CAGGATCGTTTA TTGGCGGTGGATTAT TERM 5774 4388212 - 4388187 - T 72 -6.2 -4.33417 | opp_overlap 4388187, overlap 4388183 TCGATTCAGAATAAA CGATCCTG TCTATACGTT CAGGATCG TTTATTGGCGGTGGA ytfE 4388890 - 4388228 - | cell morphogenesis/cell wall metabolism regulator TERM 5775 4388477 - 4388491 + g 74 -8.6 -4.03811 | overlap 4388468 CTGTTTGATCATGGG GAACAG GAT CTGTTC TTCTTTCATCATATG TERM 5776 4389003 - 4389022 + r 80 -7.1 -4.70879 | opp_overlap 4388996, overlap 4389007 TGAGATTAGCGTTCC GTGACCG GAACGA CGGTCGC TTTTTCCGGTTTCGC ytfF 4389958 - 4388993 - | hypothetical protein ytfG 4390887 - 4390039 - | hypothetical protein TERM 5777 4390748 - 4390776 + g 77 -3.6 -5.09426 | overlap 4390754 TCCGCCTGGCGAACG GCAATCCCGCGC TGACT GAGCGGGGCGGC TTTTTTCGGGTTACG ytfH 4390975 - 4391361 + | hypothetical protein TERM 5778 4391405 - 4391352 - T 100 -19.3 -2.78816 | gap 3 GGAGCGTTTATCAGA TGGCGGCTAGCGCTTTATTCGGCCTG CCAGT CAGGCCGAATAAA-CGC-AGC-GCCA TACGGGACTCACGTT cpdB 4393362 - 4391419 - | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein cysQ 4393629 - 4394369 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase ytfJ 4394916 - 4394359 - | hypothetical protein ytfK 4395177 - 4395449 + | hypothetical protein TERM 5779 4395517 - 4395485 - T 100 -11.3 -4.86862 | opp_overlap 4395492, overlap 4395489 4395491 4395492 GTTAAAAAAGTAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA GATGCGCCTGTAAGG TERM 5780 4395513 - 4395489 - T 100 -9.9 -4.88646 | opp_overlap 4395492, overlap 4395485 4395491 4395492 AAAAAGTAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAGATGCGCCTGT TERM 5781 4395511 - 4395491 - T 95 -12.5 -4.00914 | opp_overlap 4395492, overlap 4395489 4395485 4395492 AAAGTAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAGATGCGCCT TERM 5782 4395492 - 4395510 + T 100 -16 -4.62069 | opp_overlap 4395492 4395491 4395489 4395485 AAGTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC TERM 5783 4395510 - 4395492 - T 93 -16 -2.98108 | opp_overlap 4395492, overlap 4395491 4395489 4395485 AAGTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC tnpA 4396050 - 4395592 - | transposase for insertion sequence element IS200 TERM 5784 4396163 - 4396181 + r 100 -16 -4.18018 | opp_overlap 4396153 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAC TERM 5785 4396198 - 4396230 + r 77 -9.1 -3.85698 | opp_overlap 4396204, overlap 4396200 4396204 TTTCCATAGACAACA AAAAAACGGCTCCTG AAT CAGGAGCCGTTGATG TTTCTGGCAAACGGA TERM 5786 4396200 - 4396228 + r 86 -11.7 -3.51934 | opp_overlap 4396204, overlap 4396198 4396204 TCCATAGACAACAAA AAAACGGCTCCTG AAT CAGGAGCCGTTGA TGTTTCTGGCAAACG TERM 5787 4396204 - 4396224 + r 100 -16.9 -3.50335 | opp_overlap 4396204, overlap 4396200 4396198 TAGACAACAAAAAAA CGGCTCCTG AAT CAGGAGCCG TTGATGTTTCTGGCA TERM 5788 4396224 - 4396204 - R 100 -16.9 -5.9218 | opp_overlap 4396204 4396200 4396198 TAGACAACAAAAAAA CGGCTCCTG AAT CAGGAGCCG TTGATGTTTCTGGCA ytfL 4397591 - 4396248 - | hypothetical protein TERM 5789 4396292 - 4396306 + g 70 -3.4 -4.77165 | overlap 4396275 CATCGGGCAGTTTCG GCGCCG GTA CGTTGC TTTTATTGTCGAGAC TERM 5790 4397684 - 4397663 - R 70 -5.1 -4.41895 | opp_overlap 4397663, overlap 4397664 AACGTTTAATGAAAA CCGGCTC GTAGCAGT GAGCCGA TAAGTTCAGGGCTAG msrA 4398419 - 4397781 - | methionine sulfoxide reductase A TERM 5791 4398377 - 4398398 + g 90 -5.9 -5.26316 | opp_overlap 4398379, overlap 4398362 4398368 TGCGTCCTGGTAACG CATCTGCTT GAGT AACCAGATG TTTTTTATCAAATAA TERM 5792 4399512 - 4399493 - g 80 -4.3 -5.00616 | gap 1 GCGTCGTGGAAAAAA CCGT-GGA TGAAC TCCTACGG TCATAGCCTGACCAC ytfM 4398632 - 4400362 + | hypothetical protein TERM 5793 4400893 - 4400859 - g 100 -10.6 -4.91511 | overlap 4400860 ATGGCAGGAGAAAAA CCTGACCCTGAAACCG ACG CGGCTTCAGGGACTGC TGATCGCGCTGCCGA TERM 5794 4400892 - 4400860 - g 95 -14.1 -3.54183 | overlap 4400859 TGGCAGGAGAAAAAC CTGACCCTGAAACCG ACG CGGCTTCAGGGACTG CTGATCGCGCTGCCG ytfN 4400359 - 4404138 + | hypothetical protein ytfP 4404141 - 4404485 + | hypothetical protein TERM 5795 4404513 - 4404492 - T 71 -10.1 -3.17392 | opp_overlap 4404492 4404494, overlap 4404494 CAGCCCTGAACTGAA CACGCCACC CTCG GGTGGCGTT GTTTTTTACATTCTG TERM 5796 4404492 - 4404514 + T 100 -9.9 -5.1925 | gap 1, opp_overlap 4404492 4404494, overlap 4404494 CAGCCCTGAACTGAA CA-CGCCACC CTCG GGTGGCGTTG TTTTTTACATTCTGG TERM 5797 4404494 - 4404511 + T 100 -12.7 -4.67173 | opp_overlap 4404492 4404494, overlap 4404492 GCCCTGAACTGAACA CGCCACC CTCG GGTGGCG TTGTTTTTTACATTC TERM 5798 4404511 - 4404494 - T 81 -12.7 -3.14878 | opp_overlap 4404494 4404492, overlap 4404492 GCCCTGAACTGAACA CGCCACC CTCG GGTGGCG TTGTTTTTTACATTC SPA4232 4405747 - 4404539 - | putative sugar transporter TERM 5799 4404681 - 4404660 - G 71 -4.3 -4.56597 | overlap 4404662 GTTGTCCGGTAAAAA TAGCCGACC ATTA GGCCTGCCA ACGTACCGCCGCCGC TERM 5800 4405383 - 4405373 - G 70 -6.8 -4.07568 | TTCTTTGTCTGAAAA CCAG TCG CTGG CGAAGCGGGACTGCT TERM 5801 4405498 - 4405483 - G 85 -6.8 -4.89393 | overlap 4405484 TAAATCCGACAAAAA CGGTCG CAAT CGACCA GATTAGCACCATCAG SPA4233 4406904 - 4405744 - | putative metallo-dependent hydrolase TERM 5802 4407266 - 4407287 + r 79 -8.7 -4.20025 | opp_overlap 4407266 ATTAGCCAATAAAAA GGCCCTCAT TACT ATGAGAGCC TTTATCTTGACGATT TERM 5803 4407287 - 4407266 - R 100 -10.9 -5.11063 | opp_overlap 4407266 ATTAGCCAATAAAAA GGCCCTCAT TACT ATGAGAGCC TTTATCTTGACGATT ppa 4407847 - 4407317 - | inorganic pyrophosphatase TERM 5804 4408044 - 4408009 - R 83 -13.3 -3.23274 | opp_overlap 4408010, overlap 4408004 GGCCTGATAAGGCAA CGCCGCCATCGGACA TCTTAT TGCCCAATGGCGGCT TCATGCGTTATTCCG TERM 5805 4408010 - 4408043 + r 81 -12.4 -3.25169 | opp_overlap 4408009 4408004 GCCTGATAAGGCAAC GCCGCCATCGGACA TCTTAT TGCCCAATGGCGGC TTCATGCGTTATTCC fbp 4409072 - 4408074 - | fructose-1,6-bisphosphatase TERM 5806 4408144 - 4408102 - G 71 -11.3 -2.91593 | overlap 4408101 4408143 TATTCGCGGATAAAG CGTTCCACATCGTCAACCA TATGG CGGTTGCCGACGAAGAACG AGCGGCGCTGGTGCA TERM 5807 4408972 - 4408982 + g 73 -5.4 -4.63218 | TCGCGGTGGATGATC TTGG CGC CCAA TTTTATTGCCGACAG TERM 5808 4409692 - 4409705 + r 79 -8.1 -4.27512 | overlap 4409689 AGGTTTCCGCACGCC TGGGC GAGA GCCCA TTCTTTGTTATCGAA TERM 5809 4410670 - 4410643 - R 88 -7.6 -5.00616 | gap 1, overlap 4410644 TTGTGGGGTAAAAAA TGCCCGGT-GGCG CTG CGCTTACCGGGCC TACAATACGTACATT TERM 5810 4410669 - 4410644 - R 82 -11.1 -3.60048 | gap 1, overlap 4410643 TGTGGGGTAAAAAAT GCCCGGT-GGCG CTG CGCTTACCGGGC CTACAATACGTACAT TERM 5811 4411082 - 4411055 - R 88 -7.6 -5.00616 | gap 1, overlap 4411056 TTGTGGGGTAAAAAA TGCCCGGT-GGCG CTG CGCTTACCGGGCC TACAATACGTACATT TERM 5812 4411081 - 4411056 - R 82 -11.1 -3.60048 | gap 1, overlap 4411055 TGTGGGGTAAAAAAT GCCCGGT-GGCG CTG CGCTTACCGGGC CTACAATACGTACAT yjga 4411708 - 4411157 - | hypothetical protein pmbA 4411804 - 4413156 + | peptidase PmbA TERM 5813 4413432 - 4413417 - g 73 -6 -4.45544 | overlap 4413401 4413418 CGGCATTAACTAAAA TGCGCG CGGC CGCGCT GGATGCTCAAAAAGC cybC 4413254 - 4413640 + | soluble cytochrome b562 TERM 5814 4413642 - 4413691 + F 74 -10.9 -2.79183 | gap 1 AGAAGTATCGTTAAT TTTTGTGGGATGGCGGCTTCGC TTTATCC GC-AGGTCGCCATCCGGCAAAA TGTAATACCCATCAC SPA4240 4413918 - 4414256 + | hypothetical protein SPA4241 4414267 - 4414629 + | hypothetical protein TERM 5815 4414700 - 4414668 - g 81 -8.4 -4.3467 | gap 1 ACGGTGAGAGTAAAA GGCAAGGGCG-ACGC CAAA GCACGCGCCTTTGCC GATGCGCTGAACCAT SPA4242 4414632 - 4414931 + | hypothetical protein TERM 5816 4414918 - 4414931 + F 72 -3.1 -5.06414 | gap 1 ACAGGGTGGATTTCG TC-GCG AAA CGCTGA TTTTTATTAAAAAGG TERM 5817 4415597 - 4415611 + G 75 -6.4 -4.5394 | opp_overlap 4415597, overlap 4415598 ATGTCACCAAAGTGA TGATGG TCG CCATCG TTTTGCTGTTTGTGT SPA4243 4414954 - 4415730 + | hypothetical protein TERM 5818 4415919 - 4415942 + G 81 -3.6 -5.27335 | overlap 4415915 4415920 ACCGGCGTCTACGGC ACGGTCGCCG CTTT CGGCGCCAGC TTTTTATTTGCCCGC SPA4244 4415742 - 4416386 + | hypothetical protein TERM 5819 4416567 - 4416596 + G 71 -10.7 -3.23899 | gap 1, overlap 4416562 GCTGAAAACCATTGA CCTGCGC-GGCG AGTGTTA CGCCAGCGCGGG TTGGATTGATTCGCA TERM 5820 4416848 - 4416875 + G 83 -8.3 -4.4648 | TTGACGCCGATGCGG TCCGGCAGGCG GTAAAA CGCCACCCGGA TTTTATCGTCGGCCT TERM 5821 4416984 - 4416972 - g 93 -9.1 -4.72497 | CATGCAGCAAGAAAA CGGCA ACC TGCCG CTGATGGTGCATATT SPA4245 4416445 - 4417578 + | dihydroorotase SPA4246 4417562 - 4418680 + | hypothetical protein SPA4247 4418677 - 4419417 + | hypothetical protein TERM 5822 4419710 - 4419671 - gf 100 -15 -3.25088 | gap 1, opp_overlap 4419695, overlap 4419663 4419672 CTGCAAACGCAGCAA TCTCCCACGCTGGCGCGCG GTC CGCGCACCAGC-CAGGAGC GGATCCACTATTTGC TERM 5823 4419709 - 4419672 - gf 100 -18.5 -2.54732 | gap 1, opp_overlap 4419695, overlap 4419671 4419663 TGCAAACGCAGCAAT CTCCCACGCTGGCGCGCG GTC CGCGCACCAGC-CAGGAG CGGATCCACTATTTG TERM 5824 4419695 - 4419732 + GF 84 -6.1 -5.0538 | opp_overlap 4419672 4419671 4419663 CTGGCGCGCGGTCCG CGCACCAGCCAGGAGCG GATC CACTATTTGCTGGCGCG TTTTTTAACCTCCGC SPA4248 4419374 - 4421347 + | BglB family transcriptional antiterminator TERM 5825 4421585 - 4421567 - g 74 -7.4 -4.1899 | opp_overlap 4421560 GCATGCCAGTGAAAA CCGTCACT CTT AGCGACAG TGAAGATGCATTGAT relB 4421425 - 4421667 + | bifunctional antitoxin/transcriptional repressor RelB relE 4421657 - 4421941 + | hypothetical protein nrdG 4422409 - 4421945 - | anaerobic ribonucleotide reductase-activating protein nrdD 4424764 - 4422626 - | anaerobic ribonucleoside triphosphate reductase TERM 5826 4422756 - 4422723 - G 76 -10.1 -3.90744 | opp_overlap 4422752 4422753 GGGCTGCCTAAATAA CCGCACACGCGGCGG GTGA CCGAGACGCGCGCGG CATCGTGGTTGCCGC SPA4253 4424969 - 4425139 + | hypothetical protein treC 4426825 - 4425173 - | trehalose-6-phosphate hydrolase TERM 5827 4426694 - 4426667 - G 87 -8.5 -4.60797 | gap 2 CGGCGAGATATAAAA CGGCGT-GA-GCC AGAT GGCGTCCACGCCG AGTCGCTGTAGATAG treB 4428293 - 4426875 - | trehalose(maltose)-specific PTS system components IIBC TERM 5828 4426969 - 4426946 - G 70 -9.6 -3.32268 | overlap 4426934 4426949 GAATCACCGGGATAA CGATCGCGAT AACC ATCGCCATCG CAAACACCTGCCAGT TERM 5829 4427735 - 4427749 + g 95 -5.6 -5.40072 | opp_overlap 4427728 4427735, overlap 4427737 GCACGATACCAAGAA TCGGCG TGC CGCCCA TTTTTTTCACCGCCG TERM 5830 4427811 - 4427796 - G 80 -4.7 -5.03994 | CGGCAGATAGAAAAA GATCG CTTCGC CGATC AACCATAAAAAATCA TERM 5831 4428260 - 4428275 + g 75 -6.8 -4.39375 | opp_overlap 4428260, overlap 4428258 CAACCAGGTCAATCA GCCGGT CGAT ATCGGC TTGTTTTACTTTGCT TERM 5832 4428472 - 4428451 - R 73 -9.5 -3.45118 | gap 1, opp_overlap 4428460, overlap 4428454 CGAGGGTAGAAGGAA TGACGATCCG GCG CGGATCG-CA GCGGCCATTGATCTG TERM 5833 4428470 - 4428454 - R 79 -12.3 -2.87274 | opp_overlap 4428460, overlap 4428451 GGGTAGAAGGAATGA CGATCCG GCG CGGATCG CAGCGGCCATTGATC treR 4429378 - 4428431 - | trehalose repressor TERM 5834 4429430 - 4429417 - R 76 -5.3 -4.84359 | TGATGGTGATAAAAA GAGTA ACTT TACTC AAGCGAAGGGCAATG TERM 5835 4429615 - 4429644 + r 77 -12.1 -2.87564 | overlap 4429617 GAGAACTTTCCTTTT CCGGTAAGCCTGC CTCT GCTGTCTTACCGG TGTGTAAGACAGTGA TERM 5836 4430218 - 4430191 - R 74 -10.4 -3.14463 | AATTTTGTGCAGGAA GCGCGCTCGACG AAAG CGGCGGACGCGC TAAAAGCGATGGTGA TERM 5837 4431573 - 4431612 + r 90 -13.4 -3.59262 | opp_overlap 4431576, overlap 4431576 TATTGAAGGGTTAAG CGACGACGCGCTGGCGGC GCTG GCCGCCCGTACGACGTTG TTTGCGCGTCTGACG TERM 5838 4431609 - 4431576 - R 73 -11.5 -2.53911 | opp_overlap 4431573 4431576 TGAAGGGTTAAGCGA CGACGCGCTGGCGGC GCTG GCCGCCCGTACGACG TTGTTTGCGCGTCTG TERM 5839 4431576 - 4431609 + r 87 -11.5 -3.93256 | opp_overlap 4431576, overlap 4431573 TGAAGGGTTAAGCGA CGACGCGCTGGCGGC GCTG GCCGCCCGTACGACG TTGTTTGCGCGTCTG SPA4258 4433032 - 4432586 - | hypothetical protein yjgF 4433493 - 4433107 - | hypothetical protein pyrI 4434031 - 4433570 - | aspartate carbamoyltransferase regulatory subunit pyrB 4434979 - 4434044 - | aspartate carbamoyltransferase catalytic subunit TERM 5840 4434103 - 4434138 + g 73 -6 -4.38712 | overlap 4434088 GGCGAGCGAAAATAC CGTTGCCCGCCTGTTG GAAG TACCAGGCGTGTGGCG TTTTATCCACATCCG TERM 5841 4435027 - 4435010 - R 100 -12.7 -5.75342 | opp_overlap 4435000 4435010 CCTGGGCAAAAAAAA GCCCCTC AATT GAGGGGC TTGGTATTGGTTTTC TERM 5842 4435010 - 4435027 + r 85 -12.7 -3.4594 | opp_overlap 4435010, overlap 4435000 CCTGGGCAAAAAAAA GCCCCTC AATT GAGGGGC TTGGTATTGGTTTTC pyrL 4435116 - 4435015 - | pyrBI operon leader peptide SPA4263 4435695 - 4435207 - | putative transcriptional regulator TERM 5843 4435824 - 4435878 + r 79 -12.2 -2.76263 | gap 1, opp_overlap 4435861, overlap 4435822 AAAAGGTGACGGCGT GCCTGATGGCGCTGTG-CTTATCAG TCCTGT CGGATAAGACGCGTCGCCATCTGGC TCGTTACATCATCGC SPA4264 4437282 - 4435882 - | hypothetical protein TERM 5844 4437168 - 4437182 + g 70 -7.1 -4.07678 | CCTCTTTTCCCAGCG TGGCG TTCAT CGCCA TTTGGTATTTTCCCG TERM 5845 4437298 - 4437337 + r 81 -12.3 -3.14211 | gap 1, opp_overlap 4437303 GATGTTCTCTCCTGA TATCAC-GGATATGCGCC GCAAG GGCGCATATCCTGTGGGA TTAGTCGCCGAGCGT TERM 5846 4437331 - 4437303 - R 81 -13.2 -2.62184 | opp_overlap 4437298 TCTCTCCTGATATCA CGGATATGCGCC GCAAG GGCGCATATCCT GTGGGATTAGTCGCC SPA4265 4438342 - 4437338 - | ornithine carbamoyltransferase TERM 5847 4438438 - 4438426 - R 79 -10.5 -3.63515 | CTGTAGGCCGAATAA GGCGG AAG CCGCC ATCCGGTAAAAAGCC SPA4266 4439386 - 4438454 - | carbamate kinase TERM 5848 4439179 - 4439192 + g 74 -6.7 -4.36914 | GGTAGGGTGTAACGT TAGCG TAGG CGCTA TTTTGTAGCGCCAGC SPA4267 4440617 - 4439397 - | arginine deiminase yjgK 4441292 - 4441744 + | hypothetical protein argI 4442823 - 4441819 - | ornithine carbamoyltransferase subunit I yjgD 4442989 - 4443405 + | hypothetical protein TERM 5849 4443424 - 4443445 + G 100 -10.9 -5.41746 | opp_overlap 4443418, overlap 4443419 TGTATAGTATGACGG TACGGCAGC GTCT GCTGTCGTA TTTTTTTAACAGGTT miaE 4443417 - 4444229 + | tRNA hydroxylase SPA4272 4444385 - 4444239 - | hypothetical protein TERM 5850 4444372 - 4444355 - G 86 -12.7 -3.72576 | TCTGTCCTGAGTAAA GCCTGCC CTGC GGCAGGC AAAAAGAACTCACTC ytgA 4444952 - 4444464 - | hypothetical protein TERM 5851 4444980 - 4445005 + r 82 -11.3 -3.49618 | gap 1, opp_overlap 4444980 4444979 4444976 4444977 4444972 TGAATAATAAATGAT TCCCGGATAACA GGA TGTT-TCCGGGA TTACTTATATCAGCA TERM 5852 4445005 - 4444980 - R 73 -11.3 -2.5071 | gap 1, opp_overlap 4444980, overlap 4444979 4444976 4444977 4444972 TGAATAATAAATGAT TCCCGGATAACA GGA TGTT-TCCGGGA TTACTTATATCAGCA yjgM 4445574 - 4445059 - | putative acetyltransferase TERM 5853 4445338 - 4445326 - G 74 -10.5 -3.46602 | TTCGCTACAGGATAA CGGCG CCA CGCCG CCGCCGCCCACCACA TERM 5854 4445694 - 4445711 + H 84 -4.9 -5.3321 | opp_overlap 4445694 4445695 4445697, overlap 4445695 AGTATCGTAGTCAAA TCAGTAA CGAT TTACTGG TTTTTATTATTAATT yjgN 4445757 - 4446944 + | putative innner membrane protein TERM 5855 4446972 - 4446953 - T 100 -15 -4.66609 | opp_overlap 4446951 TATCTGATGTAAAAA GGCCGACG TTTA CGTCGGCC CATAATTCATGTTGT valS 4449941 - 4447086 - | valyl-tRNA synthetase TERM 5856 4447341 - 4447358 + g 71 -7.7 -3.9712 | gap 1 ACCGTCGATGATTTT GGTCACGG AAA CCG-GACC TTTGTCATCGGCTGG TERM 5857 4448446 - 4448466 + g 77 -7.5 -4.36914 | opp_overlap 4448448, overlap 4448448 ACGCTGGTGGGATGG AACTGACGC AGG GCGTCGGTG TTTTCTGGCCAGCCG TERM 5858 4448448 - 4448464 + g 76 -10.1 -3.79419 | opp_overlap 4448448, overlap 4448446 GCTGGTGGGATGGAA CTGACGC AGG GCGTCGG TGTTTTCTGGCCAGC TERM 5859 4448951 - 4448931 - G 74 -9.7 -3.73775 | CTTACGGGCAGCAAA GCGTTCCAG CTT CTGGAACTC AGCCGGAATCTCGCT TERM 5860 4449710 - 4449726 + g 71 -4.3 -4.62783 | overlap 4449713 CGGCGTGGTCGGTGC CGACCTG CCA CAGGGTG TTTTTACCCTGCATA holC 4450423 - 4449941 - | DNA polymerase III subunit chi TERM 5861 4450479 - 4450492 + r 73 -9.5 -3.30124 | opp_overlap 4450448 4450469 4450468 AAAACGCCTGATGGT GGCGC TAAT GCGCC TTATCAGGCCTACGG pepA 4452032 - 4450521 - | leucyl aminopeptidase yjgP 4452427 - 4453527 + | putative inner membrane protein TERM 5862 4453703 - 4453650 - g 95 -8.2 -5.06451 | gap 3, opp_overlap 4453668 GATCAGCTGAAAAAA GCGGGGCAGGGTA-AC-TACGACGCGC TGG GCGCGG-GTATGTACACCCTGCTCAGC GTACCTAAGGATATC TERM 5863 4454544 - 4454566 + G 81 -8.4 -4.29227 | ATTCCGCCGATTGTC GGCGCGCT GCTGCCG AGCGCGTC TTTCTTCCTGATTAG yjgQ 4453527 - 4454609 + | putative inner membrane protein TERM 5864 4454784 - 4454761 - T 73 -2.5 -5.2422 | opp_overlap 4454761 AAGTAGATCAAAAAA TTTATAACG TGCTGC CGTGATAAA TCTGATAACCCAAAT idnR 4455760 - 4454762 - | regulatory protein TERM 5865 4455216 - 4455226 + g 71 -8.2 -3.87075 | AGATAGAGAATTTTC CGCC GCT GGCG TTTATCCAGCATGGT TERM 5866 4455647 - 4455667 + g 80 -4.6 -5.00616 | overlap 4455648 GATCTGCGCAATACG CTCGCCGG TTTCC CTGGCGAC TTTTTTCGGCGAGCG TERM 5867 4455687 - 4455702 + g 70 -3.2 -4.82901 | overlap 4455674 TTCGGCGAGCGGATG TAACGG CTCA CCGTCA TTTTTGTCACGCCAG idnT 4457143 - 4455824 - | GntP family, L-idonate transport protein TERM 5868 4456025 - 4456013 - G 71 -10.5 -3.23216 | opp_overlap 4456009 4456013 4456024 CGCCAGTACCATTAA CGCCG GAT CGGCG TGGGTTACGTTAATA TERM 5869 4457189 - 4457172 - R 93 -12.7 -3.6581 | opp_overlap 4457171 4457180, overlap 4457170 ATTAGCGCCAAAATA GCAGCGC TTAC GCGCTGC GTCGTATTTCCCTGG idnO 4457969 - 4457205 - | gluconate 5-dehydrogenase TERM 5870 4457677 - 4457691 + g 85 -11.4 -4.06419 | GTAAACGGATGACGG CGCTGG ATA CCAGCG TTATTTATCAGGACG idnD 4459025 - 4457994 - | L-idonate 5-dehydrogenase idnK 4459242 - 4459772 + | D-gluconate kinase yjgB 4460819 - 4459800 - | putative alcohol dehydrogenase TERM 5871 4460774 - 4460803 + g 100 -8.6 -5.22006 | gap 1, overlap 4460777 ATTCATAGAGTTCGA GCT-CGCCGCC CGCCTCTTT GGCGGCGTAGC TTTTTATTATCGTCA TERM 5872 4461448 - 4461437 - g 90 -5.8 -5.24129 | opp_overlap 4461437 4461436 4461430, overlap 4461417 CCCTCTGACAAAAAA GAGG ATCG CCTC GCTTTTGGTGTTTGG int 4461290 - 4462549 + | integrase TERM 5873 4462568 - 4462590 + T 70 -4.9 -4.42806 | opp_overlap 4462568 TTATGCTAATGAAAA GCCAATC TGATTATAT GATTGGC TTTCTTTGCGCATCA TERM 5874 4462590 - 4462568 - T 70 -4.9 -4.42238 | opp_overlap 4462568 TTATGCTAATGAAAA GCCAATC TGATTATAT GATTGGC TTTCTTTGCGCATCA hsdM 4463598 - 4462603 - | DNA methyltransferase SptAIM; protects DNA against PvuII endonuclease hsdS 4463654 - 4463890 + | subunit S of type I restriction-modification system hsdR 4463887 - 4464450 + | subunit R of type I restriction-modification system TERM 5875 4464548 - 4464563 + T 71 -10.4 -2.63596 | AGATGGTCTCAGGCC GCGCCA CGAC TGGCGC TGGTCTGGCATGCCG TERM 5876 4464623 - 4464601 - T 87 -9.9 -4.22948 | opp_overlap 4464601 4464600, overlap 4464591 4464590 AAAACGCATGCAAAA CCATGCACC TTATG GATGCATGG CTTATTTCGTTAAAA SPA4292 4465236 - 4464670 - | hypothetical protein TERM 5877 4464876 - 4464907 + g 78 -5.8 -4.72986 | overlap 4464879 AAGAGACTGAACGGT CAAGCGCGCGAT TTTTTATC ATCGCGGGCTGG TTTTTAATCCCCATC SPA4293 4465498 - 4465253 - | hypothetical protein TERM 5878 4465289 - 4465327 + g 74 -8.1 -3.96148 | gap 2 GTAGCAGCCTTTTAC CCGGCG-GGGTGCC-ACGG GGG CTGTCGGCACCGGCGCGGG TTTCTCATCGACGAC TERM 5879 4466054 - 4466044 - H 72 -8.2 -3.73953 | overlap 4466027 4466045 ACCACCGGCACGAAA GGCG GCG CGCC ATGCGCCGGAATCAT TERM 5880 4466484 - 4466453 - H 73 -7.4 -4.0827 | overlap 4466454 ATACAGTCAGATAAA GGGTGAACAGTT GAGGCTGT AACTGTTCACCG ACTGTTCACTACTGT TERM 5881 4466483 - 4466454 - H 75 -10.9 -3.04239 | overlap 4466453 TACAGTCAGATAAAG GGTGAACAGTT GAGGCTGT AACTGTTCACC GACTGTTCACTACTG TERM 5882 4467166 - 4467180 + H 100 -7.8 -5.77988 | ACATTGGCGACACCG GACGCG CCT TGCGTC TTTTTTTGTGTCTAT cI 4467214 - 4467585 + | phage immunity repressor protein SPA4297 4467582 - 4467809 + | hypothetical protein SPA4298 4467806 - 4468126 + | P4 phage protein TERM 5883 4468619 - 4468595 - g 87 -8.6 -4.60797 | gap 2, opp_overlap 4468595 4468592 CGGCCACACACAAAA CCGGCGGCGTGA CGT TC-CG-CGCCGG TGATATGGTTGTCCC TERM 5884 4468961 - 4468951 - g 71 -8.2 -3.8377 | opp_overlap 4468956, overlap 4468952 AACGGCCAGAGTAAA GCCG CTG CGGC CGCAGACGCCTGCGA TERM 5885 4469178 - 4469203 + G 81 -11.9 -3.49951 | GCATTACGGCGAAGC GCTGGCCGT GGATGCGA ACGGCCAGC TTCTGTCCCGCTATG SPA4299 4468141 - 4470474 + | hypothetical protein TERM 5886 4470483 - 4470499 + F 100 -13.7 -5.47218 | GAAATAACCTCCCCT GACCGGC ATC GCCGGTC TTTTTTTACCTGCAA TERM 5887 4470551 - 4470525 - f 95 -13.2 -4.28049 | opp_overlap 4470525 TGCAAAACGGCAAAA GTGAACAGTAAA GTG TTCACTGTTCAC CAACCGTTCACCGTG TERM 5888 4470634 - 4470683 + F 100 -16.1 -4.57063 | gap 1, opp_overlap 4470633 4470634, overlap 4470624 4470636 TTTCTGAAAAAAAGT TTTTTTGTTCTGGTTTGGATCCGT GCA ACGGATCCAAACC-GAATAGAGGA TTTGTTATCTTTTCC TERM 5889 4470636 - 4470681 + F 95 -16.5 -2.5794 | gap 1, opp_overlap 4470634 4470633, overlap 4470624 4470634 TCTGAAAAAAAGTTT TTTTGTTCTGGTTTGGATCCGT GCA ACGGATCCAAACC-GAATAGAG GATTTGTTATCTTTT SPA4300 4470742 - 4470891 + | hypothetical protein SPA4301 4471027 - 4471185 + | hypothetical protein TERM 5890 4472640 - 4472680 + F 83 -10.6 -3.81256 | opp_overlap 4472643, overlap 4472635 4472641 4472643 TAAAATGGCGTGAGT ATATTAGCATCCGCACAG ATAAA TTGTGCGAATGCTAATAG TTGATTTTTGGAGAT TERM 5891 4472641 - 4472679 + F 84 -14.1 -2.88031 | opp_overlap 4472643, overlap 4472640 4472635 4472643 AAAATGGCGTGAGTA TATTAGCATCCGCACAG ATAAA TTGTGCGAATGCTAATA GTTGATTTTTGGAGA TERM 5892 4472643 - 4472677 + F 80 -12.3 -2.9838 | opp_overlap 4472643, overlap 4472641 4472640 4472635 AATGGCGTGAGTATA TTAGCATCCGCACAG ATAAA TTGTGCGAATGCTAA TAGTTGATTTTTGGA TERM 5893 4472677 - 4472643 - f 84 -13.8 -2.78715 | opp_overlap 4472641 4472640 4472635 4472643 AATGGCGTGAGTATA TTAGCATCCGCACA GATAAAT TGTGCGAATGCTAA TAGTTGATTTTTGGA sefA 4472704 - 4473201 + | fimbrial structural protein TERM 5894 4473209 - 4473254 + F 73 -7.9 -4.18908 | gap 1, opp_overlap 4473202 4473222, overlap 4473202 4473214 4473222 4473245 AAAACTAATTTAATT TAAACTT-TATAAATGCCCTCA ATA TGAGGGCATTTGGATAATTTTA TTATTTTAAAAATAT TERM 5895 4473214 - 4473249 + F 91 -7.8 -5.093 | gap 1, opp_overlap 4473222, overlap 4473209 4473222 4473245 TAATTTAATTTAAAC TT-TATAAATGCCCTCA ATA TGAGGGCATTTGGATAA TTTTATTATTTTAAA TERM 5896 4473222 - 4473240 + F 95 -13.2 -3.77014 | opp_overlap 4473222, overlap 4473214 4473209 TTTAAACTTTATAAA TGCCCTCA ATA TGAGGGCA TTTGGATAATTTTAT TERM 5897 4473240 - 4473222 - f 95 -13.2 -3.95219 | opp_overlap 4473222 4473214 4473209 TTTAAACTTTATAAA TGCCCTCA ATA TGAGGGCA TTTGGATAATTTTAT TERM 5898 4473285 - 4473267 - f 82 -7.6 -4.63527 | opp_overlap 4473256 4473245 4473266 4473267 4473269 TTATTATTTTAAAAA TATCTATT TTG AATAGATA GGTTTTATGCTTCCA sefB 4473323 - 4474075 + | fimbrial chaperone protein sefC 4474080 - 4476524 + | outer membrane fimbrial usher protein TERM 5899 4476761 - 4476749 - T 85 -5.5 -5.27769 | opp_overlap 4476749 AGAAAAAATTAAAAA TACCC CAG GGGCA TATATTATTAGAGGT TERM 5900 4476991 - 4476970 - T 77 -7.2 -4.3953 | opp_overlap 4476966, overlap 4476971 TTGAATTATAATAAA GGGTGCGC AAATTG GCGCACCT ATAACTCTTAATTAT TERM 5901 4476990 - 4476971 - T 74 -10.7 -3.22995 | opp_overlap 4476966, overlap 4476970 TGAATTATAATAAAG GGTGCGC AAATTG GCGCACC TATAACTCTTAATTA sefR 4477643 - 4476999 - | fimbrial regulator TERM 5902 4478729 - 4478752 + G 77 -8 -4.08767 | opp_overlap 4478729, overlap 4478712 4478731 4478733 GCTGCAGGGCTATAA CTGCGGGCAG ATTG CTGCCCTCTG TTTTCGCAGCGTCAA TERM 5903 4478731 - 4478750 + G 70 -9.2 -3.6422 | opp_overlap 4478729, overlap 4478712 4478729 4478733 TGCAGGGCTATAACT GCGGGCAG ATTG CTGCCCTC TGTTTTCGCAGCGTC TERM 5904 4478733 - 4478748 + G 73 -10.4 -3.39908 | opp_overlap 4478729, overlap 4478712 4478731 4478729 CAGGGCTATAACTGC GGGCAG ATTG CTGCCC TCTGTTTTCGCAGCG SPA4309 4478586 - 4478936 + | GerE family regulatory protein TERM 5905 4478992 - 4479019 + F 72 -4.8 -4.61868 | overlap 4478991 TTATTACGCCTGTCT GGCCGTCGTCAT ATTA ATGGCAATGGTC TTTTGTGTGTCAGTG TERM 5906 4479277 - 4479293 + G 71 -10.9 -3.19463 | opp_overlap 4479289, overlap 4479251 TGATTGCGCAGGAGT GGGAGTT CAT AACTCCC TTGGTGGCTGATGCC SPA4310 4479168 - 4479833 + | hypothetical protein TERM 5907 4480206 - 4480159 - g 72 -2.5 -4.96501 | gap 1, opp_overlap 4480205, overlap 4480160 4480162 CGGCAGAAAAAGAAA TTACCGGGATACACGGC-GGCC TCTCC GGCCTGACATGGAACCCGGACA GCAGAACGCTGTTTG SPA4311 4480020 - 4480859 + | putative outer membrane protein SPA4312 4481122 - 4481388 + | hypothetical protein TERM 5908 4481650 - 4481626 - g 74 -2.7 -4.84492 | overlap 4481618 4481630 TTAACCACAAGAAAA CCAACCGGA TTTATTG TCCGGAAGG CCTGAACCTGCGCAG SPA4313 4481469 - 4482146 + | hypothetical protein TERM 5909 4482299 - 4482325 + T 100 -18.1 -3.66178 | ACCGCCTGATGTTAG CCGCTCCCGAT GTTTA ATCGGGAGCGG TTTCGCATTAAGGGA yjiU 4488653 - 4482333 - | hypothetical protein TERM 5910 4483826 - 4483842 + g 80 -9.4 -4.07568 | opp_overlap 4483823 4483825 CTTCATCAGAATTAT CGGGGA TATAC TCCCCG TTTTGCGGACGGCGC TERM 5911 4484838 - 4484855 + g 75 -4.1 -4.85599 | GACGGCAATAGCCTC CTGCG TTTTATCC CGCAG TTTTTCTGCCGTAAC TERM 5912 4486825 - 4486839 + g 70 -10 -3.43919 | opp_overlap 4486824, overlap 4486824 4486830 GGCCCGCCCAGTAAC GCCCTT CGG AAGGGC TGTTTACCCTTTCCG TERM 5913 4488184 - 4488173 - G 78 -2.2 -5.27335 | GTGGGTAAAGAAAAA GTGC TCTC ACAC CTATCAACGGTTTTT TERM 5914 4488410 - 4488424 + g 77 -4.2 -4.87892 | overlap 4488412 GCGAGTCCACCACCT CCTTGC TTA GCAACG TTTGTTTTGTTGCAA SPA4315 4491965 - 4488666 - | hypothetical protein TERM 5915 4489166 - 4489153 - G 74 -2.3 -5.1101 | overlap 4489154 TTATGAGTCAAAAAA GCACG AAAA CGTGT GGCGGAACGTTTAAC TERM 5916 4489216 - 4489200 - G 72 -2.2 -4.91712 | overlap 4489201 TGTAATGGATAAAAA CTCCCA GAAAA CGGGAA ACTCACTTTCAATAC TERM 5917 4490163 - 4490194 + g 74 -7.3 -4.16814 | opp_overlap 4490163 4490162 TATTTGTAATGAAAT TGATGCAGGAGGA ATGCCC TCCGCCTTCATCA TTATTTCTGTACTAC TERM 5918 4490765 - 4490747 - G 76 -9.6 -3.84406 | TTGGCAGCACAATAA GTACATGG CTG CCACGTAC GCTGCAAGAGGCTTG TERM 5919 4492003 - 4492013 + H 86 -4 -5.4593 | opp_overlap 4492003, overlap 4491997 AGTGAATGGCTGAAA GTTA TTA TAAC TTTTTGTTATTTTGA TERM 5920 4492160 - 4492177 + H 71 -7.1 -4.08394 | opp_overlap 4492159 4492162 AATCTGTAAGGAGAT GATTTGT AGCT ACAAATC TTTTCAACCCCATAT TERM 5921 4492207 - 4492243 + H 84 -8.6 -4.67353 | overlap 4492210 TCATCCCATTGAACC TCCGGCCGGAACCGTC TTTAC GATGGTTCCGGCCTTC TTTTTACCTGCCTGC TERM 5922 4492210 - 4492240 + H 100 -19.1 -4.44608 | overlap 4492207 TCCCATTGAACCTCC GGCCGGAACCGTC TTTAC GATGGTTCCGGCC TTCTTTTTACCTGCC SPA4316 4492229 - 4492468 + | hypothetical protein SPA4317 4492546 - 4493421 + | hypothetical protein TERM 5923 4493855 - 4493897 + T 90 -15.3 -2.74514 | opp_overlap 4493859 4493864 4493868, overlap 4493859 4493864 4493868 TTTATTACAGCTTTA TAAATTAAACAAATCTGCC ATAGA GACAGATTTGTTTAATTTA TAATTAGAGGTTTGC TERM 5924 4493893 - 4493859 - T 100 -13.9 -3.88787 | opp_overlap 4493855 4493859 4493864 4493868, overlap 4493864 4493868 TTACAGCTTTATAAA TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA TTTATAATTAGAGGT TERM 5925 4493859 - 4493893 + T 95 -11.7 -4.05714 | opp_overlap 4493859 4493864 4493868, overlap 4493855 4493864 4493868 TTACAGCTTTATAAA TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA TTTATAATTAGAGGT TERM 5926 4493888 - 4493864 - T 79 -9.4 -4.13995 | opp_overlap 4493859 4493855 4493864 4493868, overlap 4493859 4493868 GCTTTATAAATTAAA CAAATCTGCC ATAGA GACAGATTTG TTTAATTTATAATTA TERM 5927 4493864 - 4493888 + T 71 -7.2 -4.17789 | opp_overlap 4493864 4493859 4493868, overlap 4493859 4493855 4493868 GCTTTATAAATTAAA CAAATCTGCC ATAGA GACAGATTTG TTTAATTTATAATTA yeeN 4494617 - 4493901 - | hypothetical protein TERM 5928 4494652 - 4494673 + r 73 -4.5 -4.87273 | gap 1, opp_overlap 4494652 4494653, overlap 4494653 4494654 AATTATTTACATTAA TG-GCAGGTT AAT AACCTGCATA TTTTTCTACCGTATT TERM 5929 4494653 - 4494671 + r 73 -7.4 -4.05067 | opp_overlap 4494652 4494653, overlap 4494652 4494654 ATTATTTACATTAAT GGCAGGTT AAT AACCTGCA TATTTTTCTACCGTA TERM 5930 4494654 - 4494670 + r 75 -10.9 -3.02317 | opp_overlap 4494652 4494653, overlap 4494653 4494652 TTATTTACATTAATG GCAGGTT AAT AACCTGC ATATTTTTCTACCGT TERM 5931 4494989 - 4495018 + r 72 -10.2 -2.76453 | gap 1, opp_overlap 4494989 4494988, overlap 4494990 TGCATACTTTTAAAC GGAGGTATA-CCT CTTGT AGGCTATACCTCC TGCTTCACGTTATCG TERM 5932 4495018 - 4494989 - R 71 -10.2 -2.75343 | gap 1, opp_overlap 4494989 4494990, overlap 4494988 TGCATACTTTTAAAC GGAGGTATA-CCT CTTGT AGGCTATACCTCC TGCTTCACGTTATCG yjhP 4496653 - 4495028 - | hypothetical protein TERM 5933 4495781 - 4495819 + g 71 -4.5 -4.56597 | overlap 4495764 4495782 4495783 GATATCCATTGGGTT ATTCCTTTTACTGAGGG CGATT CCCTCAGCGAGAGGGGC TTTTTCAGCCAGCAG SPA4321 4496921 - 4496664 - | hypothetical protein SPA4322 4497410 - 4498018 + | hypothetical protein TERM 5934 4498123 - 4498154 + F 90 -14.6 -3.18429 | overlap 4498120 4498126 TTGAATAACCCTTGT CTGTGGCATTCAGT GAAG ACTGAATGCCATGG TTAATCCAGATTTTC TERM 5935 4498126 - 4498151 + F 87 -14.9 -2.78395 | overlap 4498120 4498123 AATAACCCTTGTCTG TGGCATTCAGT GAAG ACTGAATGCCA TGGTTAATCCAGATT TERM 5936 4498345 - 4498364 + F 82 -2.8 -5.47159 | overlap 4498348 TTAATTAGAGTAATG TGGCGCTA TTCA TAGCGTAA TTTTTTCTGTTGCGG SPA4323 4498394 - 4499305 + | hypothetical protein TERM 5937 4499359 - 4499389 + F 100 -8.3 -5.55664 | TTATTTAAATTTGTT CAGACGTCGGAAT TTTTT GTTCTGCCGTCTG TTTTTTTAGTGATGA SPA4324 4499510 - 4499971 + | hypothetical protein SPA4325 4500653 - 4499988 - | hypothetical protein uxuR 4501003 - 4501776 + | DNA-binding transcriptional repressor UxuR TERM 5938 4501792 - 4501812 + T 86 -8.9 -4.4773 | opp_overlap 4501791 TTATACCTGGAATAG CGTGGGCAG ACC CAGTCCACG TTTTACTTCCTGTAG SPA4327 4502790 - 4501777 - | tryptophanyl-tRNA synthetase II TERM 5939 4502438 - 4502449 + g 74 -2.2 -5.0538 | CGGGTAAAGCCTTTT TGGG CAAT CTCA TTTTTTACCGTAGGA TERM 5940 4502862 - 4502841 - H 90 -15.9 -2.64274 | opp_overlap 4502838 4502844, overlap 4502818 4502827 4502825 4502828 4502838 4502837 ACGTCCCGAAACGCA GTAGCCGCC TTTC GGCGGCTAC TTAAAAAGGGATAGT TERM 5941 4502844 - 4502859 + H 76 -11.8 -2.71011 | opp_overlap 4502818 4502827 4502825 4502828 4502841 4502838 4502837, overlap 4502838 TCCCGAAACGCAGTA GCCGCC TTTC GGCGGC TACTTAAAAAGGGAT SPA4328 4503087 - 4503239 + | hypothetical protein TERM 5942 4503934 - 4503906 - g 71 -10.9 -3.22298 | opp_overlap 4503928 4503929, overlap 4503907 4503909 TTCACGCATGAGCAA TCATGGCGACGCC GAA GGCAGCGCCATGG AGACCGTGGATTTGG TERM 5943 4503933 - 4503907 - g 81 -14.4 -2.53164 | opp_overlap 4503928 4503929, overlap 4503906 4503909 TCACGCATGAGCAAT CATGGCGACGCC GAA GGCAGCGCCATG GAGACCGTGGATTTG SPA4329 4503508 - 4504038 + | hypothetical protein TERM 5944 4504807 - 4504779 - g 81 -8.2 -4.37658 | opp_overlap 4504798, overlap 4504780 AACGTGGCGATAAAA CTGCGGC-GCAAGC GCT GCT-GCTGCCGCAA ATCGATAGCCTTATT SPA4330 4504277 - 4505011 + | aspartate racemase yjiE 4505925 - 4505017 - | putative DNA-binding transcriptional regulator TERM 5945 4505272 - 4505254 - G 83 -6 -4.87807 | CGAAGAGACGAAAAA TGTACTGA AAC TCAGTTCA GCATGGCGAGTCAGG TERM 5946 4505935 - 4505988 + r 71 -10.3 -2.6039 | gap 1, overlap 4505931 ATCCATTTACCGTTA T-CCTGTCAGCCGTCCGAAGGGGCAT TCT ACGTCCATTCGGGCGGCTGACAACCA CTTATCCCGTCCTCT iadA 4507216 - 4506044 - | isoaspartyl dipeptidase TERM 5947 4506671 - 4506622 - G 70 -3.3 -4.8048 | gap 1, opp_overlap 4506631 4506639 4506640 TGCCCATATGAAAAA CGCTGACAC-CGGGTTTGCCGCCC AGC AGGCCGCCAACGCGTGATTCGGCG GCCATGCTGGCGAGT yjiG 4507690 - 4507229 - | hypothetical protein yjiH 4508571 - 4507687 - | hypothetical protein SPA4335 4509089 - 4508715 - | hypothetical protein TERM 5948 4509111 - 4509077 - G 70 -9.6 -3.41839 | opp_overlap 4509072 TAGACAGATTGATAA CACTAAAAACCATA GAATAAG TATAGTTTTTAGTG GCATCTTTACCTTGA yjiJ 4510413 - 4509229 - | hypothetical protein TERM 5949 4509309 - 4509295 - G 77 -3.5 -5.0133 | gap 1, opp_overlap 4509306, overlap 4509297 4509298 CAGCGCGGCAAAAAA GAGCGC CGCG GCGC-C GCAAAGCGTGGCGTT TERM 5950 4509308 - 4509297 - G 74 -7.2 -4.13561 | opp_overlap 4509306, overlap 4509295 4509298 GCGCGGCAAAAAAGA GCGC CGCG GCGC CGCAAAGCGTGGCGT yjiN 4511949 - 4510633 - | hypothetical protein TERM 5951 4511375 - 4511418 + g 71 -7.7 -3.92641 | overlap 4511373 TGACGATCGTTTTTG GT-CATGCTTTCCAGCATCAG GGCG CTGGTGCTGGAAAG-ATCCAC TTTATCAATCGCCTT TERM 5952 4511959 - 4511988 + H 79 -10.8 -3.5891 | opp_overlap 4511950 4511954 4511952 4511957, overlap 4511958 AAACATCAGATTATC CTGTGCCGGATA AGCCTC TATCCGGCAGAG TGTTTACTTCTCAGC TERM 5953 4513733 - 4513749 + G 83 -12.3 -3.61889 | opp_overlap 4513735 AATCGACGACCTCAA CACCGCA TGA TGCGGTG TTTAAAACCTTTTTG SPA4339 4513711 - 4514676 + | hypothetical protein TERM 5954 4515472 - 4515437 - g 76 -11.9 -3.0263 | gap 2 ATCAGGTGGCGAACA TCATCGCCG-GCCC-GC GCGT GCAGGGCGCGGCGCTGA CCGGATCTGAAAAAG TERM 5955 4515515 - 4515487 - g 71 -4.3 -4.62336 | ACCGGATCTGAAAAA GCGGGGAGTGCCG TGG CGGCACAGGCGGC GAAGCACATTAAAAA TERM 5956 4516067 - 4516090 + G 71 -7.4 -4.05033 | gap 1, overlap 4516069 GCGCTAAACGCATGG CC-TCCCGGAT TGA AACCGGGATGG TTTATATCAACTGGC SPA4340 4514857 - 4516227 + | hypothetical protein TERM 5957 4516233 - 4516262 + TF 70 -2.1 -5.00616 | gap 1, overlap 4516236 GCGCCGCTAATCCCT GTT-GCCCCTCT GAAAACG GGAGGGGCTGGC TTTTTTGCAGCGAAG SPA4341 4516465 - 4516322 - | hypothetical protein yjiS 4516432 - 4516596 + | putative cytoplasmic protein SPA4343 4517372 - 4516671 - | hypothetical protein TERM 5958 4517407 - 4517435 + r 100 -12.5 -4.51799 | opp_overlap 4517410, overlap 4517410 ATATGAATTATAATT AAAGCTGGCAAGG GTT CTTTGCCAGCTTA TTTTATGCGTTTACT TERM 5959 4517410 - 4517432 + r 100 -14.2 -4.35693 | opp_overlap 4517410, overlap 4517407 TGAATTATAATTAAA GCTGGCAAGG GTT CTTTGCCAGC TTATTTTATGCGTTT TERM 5960 4517432 - 4517410 - R 95 -12 -4.04295 | opp_overlap 4517410 4517407 TGAATTATAATTAAA GCTGGCAAGG GTT CTTTGCCAGC TTATTTTATGCGTTT yjiW 4517841 - 4517446 - | endoribonuclease SymE TERM 5961 4517992 - 4517974 - R 100 -11.7 -5.29445 | GGGGAATAATAAAAA GCGCACC GGGAA GGTGCGC AGGAAAATAAGCGTC hsdS 4519394 - 4518006 - | specificity determinant for hsdM and hsdR hsdM 4520977 - 4519391 - | DNA methylase M, host modification TERM 5962 4520468 - 4520439 - G 81 -4.1 -5.26875 | gap 1, overlap 4520440 4520441 GCTTCAATCAAAAAA CCTGC-GGTCCCGG CAG CCGGGTCCTGCACC ACCTCACGCGGCTGC hsdR 4524644 - 4521135 - | type I restriction enzyme EcoKI subunit R TERM 5963 4522445 - 4522468 + g 100 -6 -5.4505 | overlap 4522436 CCATGTCGGCATGGG CGTTGGTG ACGCAGAA CACCAGCG TTTTTTGTTGCCCGA TERM 5964 4523332 - 4523355 + g 77 -3.9 -4.99043 | gap 1, overlap 4523345 CCGAGTTCGCTCATT CCGG-GGTTT TCAGC AAACCACTGG TTTTGTTTCTGCGGG TERM 5965 4523403 - 4523423 + g 77 -8.2 -4.20042 | CAGCAGCTCTTCCGG GCGATGCC ATTCC GGCAGCGC TTTTGACATATTGGT TERM 5966 4525093 - 4525079 - g 77 -8.6 -4.08216 | overlap 4525091 CTATCCCGGGGAAAA TGGTGT TTA ACACCA GCGGGAATGAGCTGG mrr 4524842 - 4525756 + | mrr restriction system protein TERM 5967 4525998 - 4525967 - f 82 -13.4 -3.11291 | overlap 4525970 GGTATAATCGTAAGA TAATTGTATATACA TTTT TGTATATACAATTA GGGAAAACACATGCC TERM 5968 4525995 - 4525970 - f 83 -10.7 -3.6947 | overlap 4525967 ATAATCGTAAGATAA TTGTATATACA TTTT TGTATATACAA TTAGGGAAAACACAT SPA4349 4526009 - 4526296 + | hypothetical protein SPA4350 4526283 - 4526585 + | hypothetical protein yjiA 4527616 - 4526660 - | putative GTP-binding protein YjiA yjiX 4527830 - 4527627 - | hypothetical protein TERM 5969 4527883 - 4527855 - R 76 -7.5 -4.3255 | gap 2, opp_overlap 4527862 CTGTTAATGAATAAA GCCGGAT--GGCG GCTTG CGCCTTATCCGGC CTACACTAGCCGGGA TERM 5970 4527889 - 4527922 + r 83 -9 -4.33274 | gap 3, opp_overlap 4527892, overlap 4527891 CTTATCCGGCCTACA CT-A-GCCGGG-AGCGC TGT GCGCTACCCGGCATCAG TTTTAGTGGTGTGAA TERM 5971 4527891 - 4527918 + r 82 -13.4 -2.78495 | gap 1, opp_overlap 4527892, overlap 4527889 TATCCGGCCTACACT AGCCGGG-AGCGC TGT GCGCTACCCGGCA TCAGTTTTAGTGGTG TERM 5972 4527917 - 4527892 - R 95 -16.9 -2.62263 | gap 1, opp_overlap 4527891 4527889 ATCCGGCCTACACTA GCCGGG-AGCGC TGT GCGCTACCCGGC ATCAGTTTTAGTGGT cstA 4530075 - 4527925 - | carbon starvation protein A TERM 5973 4531541 - 4531523 - g 70 -5.2 -4.37886 | overlap 4531524 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATCGACGGTATTGC tsr 4530442 - 4532103 + | methyl-accepting chemotaxis protein I, serine sensor receptor mdoB 4534559 - 4532268 - | phosphoglycerol transferase I TERM 5974 4533600 - 4533585 - G 71 -6.1 -4.323 | overlap 4533576 CGTAAACAGCGAAAA CCGCT GGCCTG AGCGG GAAAGCGCTTCAAAT TERM 5975 4533790 - 4533804 + g 71 -4.2 -4.61231 | overlap 4533791 CCCTGCACGAAATAG TTCTGG TAA CCGGAG TTTTTCAGAATATCG yjjA 4535303 - 4534842 - | hypothetical protein TERM 5976 4535033 - 4535043 + g 76 -5.4 -4.7416 | CCAACCCCAACTTGT TCAG AAT CTGA TTTTTAACGTTTTCC dnaC 4536098 - 4535361 - | DNA replication protein DnaC dnaT 4536640 - 4536101 - | primosomal protein I TERM 5977 4536617 - 4536595 - G 80 -9.2 -4.10161 | GATGATCGTGTAAAA GGACGTCA ATACCGA TGACGTCC GACGTTAAAATTCTG yjjB 4537206 - 4536733 - | hypothetical protein yjjP 4538108 - 4537197 - | hypothetical protein TERM 5978 4538105 - 4538090 - G 74 -4.6 -4.82901 | TCTTGTTGATAAAAA CGTCAG CCGC CAGACG CAACGCATAAGCTTC TERM 5979 4539275 - 4539258 - g 84 -3.3 -5.41143 | opp_overlap 4539260, overlap 4539260 TAGCGCCCAAAAAAA TAGCGCC ATGC GACGCTT ATCAATACACAGTAA TERM 5980 4539273 - 4539260 - g 71 -5.9 -4.34482 | opp_overlap 4539260, overlap 4539258 GCGCCCAAAAAAATA GCGCC ATGC GACGC TTATCAATACACAGT yjjQ 4538686 - 4539411 + | putative regulatory protein bglJ 4539423 - 4540046 + | DNA-binding transcriptional activator BglJ SPA4363 4540555 - 4540097 - | hypothetical protein fhuF 4541494 - 4540706 - | ferric iron reductase involved in ferric hydroximate transport TERM 5981 4540805 - 4540783 - G 75 -11.3 -3.40403 | opp_overlap 4540804 TTCTGCGTACCAGAA GACCGTCGC GTATT ACGACGGTC CGCCACAGCGGGTTA TERM 5982 4540872 - 4540854 - G 90 -4.5 -5.40072 | opp_overlap 4540854, overlap 4540856 4540857 4540858 TGCTTTTCAAAAAAA CAGCGCT GGCGT AGCGTTG CCAGCAGGGCTTCGC SPA4365 4542679 - 4541615 - | hypothetical protein SPA4366 4542930 - 4543166 + | hypothetical protein TERM 5983 4543660 - 4543648 - T 70 -9.1 -3.30243 | opp_overlap 4543655 4543655, overlap 4543650 ACGTAGGTTGGATAA GACGC CTG GCGTC GCCATCCGGCACATG rsmC 4544735 - 4543707 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 5984 4544811 - 4544830 + H 76 -9.2 -3.71378 | GATTTGCTATATTTG CGCCCCTG ATTA CAGGAGCG TTTCGCTATGACATC holD 4544838 - 4545275 + | DNA polymerase III subunit psi rimI 4545220 - 4545666 + | ribosomal-protein-alanine N-acetyltransferase yjjG 4545685 - 4546365 + | nucleotidase TERM 5985 4546961 - 4546947 - g 70 -7.1 -4.17425 | opp_overlap 4546947, overlap 4546939 AGAACGAGCTGAAAA TCGGC TGCGC GCCGA TCACCTGGCCGATTG TERM 5986 4547773 - 4547783 + G 81 -8.2 -4.24002 | overlap 4547772 CGATCTGATTGTCGG CGCC GTG GGCG TTTTGCAGTTTGACG prfC 4546457 - 4548046 + | peptide chain release factor 3 TERM 5987 4548057 - 4548076 + F 100 -16.4 -3.33483 | opp_overlap 4548033, overlap 4548052 ACTGATCCCTTTCCG GGCGCGGC ATCC GCCGCGCC TTCGTACTTTCCCTG osmY 4548448 - 4549065 + | periplasmic protein TERM 5988 4549078 - 4549104 + F 86 -14.5 -2.62184 | gap 1, overlap 4549078 TAATTCGTCGTAATT CGTCCTCCCGAC GTTT GTCGGGAGG-CG TAATGTGCACCACAC SPA4376 4549176 - 4549355 + | hypothetical protein TERM 5989 4549386 - 4549404 + F 100 -14.6 -4.28049 | opp_overlap 4549386 ATATATTGCTATCAA GCCAGTCC AGC GGACTGGC TTTTACGGTTTTAGC TERM 5990 4549404 - 4549386 - f 90 -14.6 -3.1637 | opp_overlap 4549386 ATATATTGCTATCAA GCCAGTCC AGC GGACTGGC TTTTACGGTTTTAGC TERM 5991 4550314 - 4550286 - g 74 -10.9 -3.54543 | ATTTATCCGCCGAAA CCGCTGCACAGCA TGG CGCTGGGCAGCCG TATCCCGGCGCTGCG yjjU 4549479 - 4550552 + | hypothetical protein TERM 5992 4550705 - 4550723 + G 74 -8 -3.9712 | overlap 4550699 4550692 CGCGTGCTGGCGCTG GCGGCGCG TTT CCCGTCGC TTTATGCTGCGCTGG yjjV 4550549 - 4551322 + | putative deoxyribonuclease YjjV yjjW 4552218 - 4551355 - | hypothetical protein TERM 5993 4552163 - 4552144 - GT 77 -9.2 -3.9461 | overlap 4552145 GCCCTGTAAGAATAA TGCCAGGC GGCT GCCTGGCC CATCGACGCAGGAAA TERM 5994 4552162 - 4552145 - GT 80 -12.7 -2.96444 | overlap 4552144 CCCTGTAAGAATAAT GCCAGGC GGCT GCCTGGC CCATCGACGCAGGAA yjjI 4553740 - 4552190 - | hypothetical protein TERM 5995 4553645 - 4553659 + gH 86 -7.1 -5.06816 | GTTTTCAGCTTCCAG CGCCA GAAAA TGGCG TTTTTGTTCAGGCGT TERM 5996 4554031 - 4554015 - g 70 -6.5 -4.20084 | overlap 4554020 ATGACTGATTTAAAA GCAAGCA GCC TGCGTGC GCTCAAACTGATGGA TERM 5997 4554528 - 4554502 - g 71 -5.8 -4.26903 | overlap 4554481 4554527 CGGATTTCATCAAAA CCTCTACCGGTA AAG TGCCGGTAAACG CTACGCCGGAAAGCG deoC 4553982 - 4554779 + | deoxyribose-phosphate aldolase TERM 5998 4554952 - 4554938 - g 71 -4.2 -4.60889 | opp_overlap 4554937 AATTATTCGTAAAAA GCGTGA TGG TCATGC GTTGAGTGACGAAGA TERM 5999 4554962 - 4554973 + G 71 -4.4 -4.57482 | opp_overlap 4554966, overlap 4554966 TCATGCGTTGAGTGA CGAA GAAA TTCG TTTCTTTATCAATGG deoA 4554906 - 4556228 + | thymidine phosphorylase TERM 6000 4556515 - 4556494 - g 77 -8 -4.11216 | GCTCTACCGGTAAAA TTGCCGCC GGCATG GACGGCAA CGCGGACGTTATTGG TERM 6001 4556675 - 4556645 - g 77 -7.7 -4.3129 | gap 2 CAGCGACCACGAAAA CAGCTT-CCC-GCAG GAA CTGCTGGATAAGCTG GTAAAACGCGCCAAC deoB 4556280 - 4557503 + | phosphopentomutase deoD 4557713 - 4558432 + | purine nucleoside phosphorylase yafM 4558639 - 4559130 + | hypothetical protein lplA 4560231 - 4559215 - | lipoate-protein ligase A TERM 6002 4559838 - 4559849 + g 83 -7.2 -4.56775 | CGGAGACTTTGCGAT CGCC GTCC GGCG TTTTTACGACCAGAT smp 4560909 - 4560265 - | hypothetical protein TERM 6003 4560838 - 4560820 - G 70 -9.5 -3.35849 | overlap 4560818 TTGACTAAACCAAGA CGCGCCC TGCAT GAGCGCG ACGAGCAGTGTGAGA serB 4561026 - 4561994 + | phosphoserine phosphatase TERM 6004 4562340 - 4562369 + G 83 -8.5 -4.41494 | gap 1 AGTTTGACCGCGTGC TGG-GCGGCGGGGT GGT ACCCGGCAGCGCCA TTTTGATTGGCGGTA radA 4562078 - 4563460 + | DNA repair protein RadA TERM 6005 4564489 - 4564470 - g 79 -7.2 -4.4891 | gap 1, opp_overlap 4564470 4564468 4564466 CCGACTACGATAAAA TTGCGC-TG GGC CATGCGCAA TATATTGATTTCGCA nadR 4563611 - 4564843 + | nicotinamide-nucleotide adenylyltransferase TERM 6006 4564884 - 4564852 - T 76 -12 -2.74443 | opp_overlap 4564861, overlap 4564851 4564847 GGGATAAGAACCAAT GCCTGATGCGACGC TTACC GCGTCTTATCAGGC CTACAGTTTCACAAC TERM 6007 4564915 - 4564959 + T 72 -5.6 -4.42806 | gap 1, overlap 4564916 GTATTGGAATCGCTG GGTTTGTAGGCCGGGTAAGCG CAAG CGCC-ACCCGGCATTCAGACG TTTATTTGGCAATAC yjjK 4566628 - 4564961 - | putative ABC transporter ATP-binding protein TERM 6008 4566138 - 4566101 - G 91 -14.1 -3.14132 | gap 1, opp_overlap 4566113 4566114 4566115, overlap 4566103 CGGCTTTTCCAGCAA CAGACGGCACAGCGCCAC GCG GCGGCGCT-CGCCGCCGG ACAGTTTTTCGACTT TERM 6009 4566136 - 4566103 - G 91 -15.3 -3.13403 | gap 1, opp_overlap 4566113 4566114 4566115, overlap 4566101 GCTTTTCCAGCAACA GACGGCACAGCGCCAC GCG GCGGCGCT-CGCCGCC GGACAGTTTTTCGAC TERM 6010 4567491 - 4567474 - g 71 -7.7 -3.92324 | opp_overlap 4567477, overlap 4567475 CGGCGGAATATCAAA CGATCGC CTCA GCGATCA TTACCCTCGCTAATG TERM 6011 4567681 - 4567669 - g 84 -9.1 -4.29227 | opp_overlap 4567674, overlap 4567673 TTAATGAGGAACAAA CGCAG GCG CTGCG CGATATCGTTGCCTG slt 4566837 - 4568774 + | lytic murein transglycosylase TERM 6012 4568915 - 4568941 + G 100 -13.8 -4.1711 | GGAGTTACTCCGTCA GGCATATGCAGA GGA TCTGCATCTGCC TTTATTACAACTGAT trpR 4568832 - 4569158 + | Trp operon repressor yjjX 4569775 - 4569260 - | NTPase TERM 6013 4570034 - 4570004 - g 73 -6 -4.37886 | TTAGGCCGCACAAAA CGCACGGCGGAG ATTATCG CCCAGGCGTGCG GGTGTGATATTACCT gpmB 4569824 - 4570471 + | phosphoglycerate mutase rob 4571337 - 4570468 - | right origin-binding protein creA 4571549 - 4572022 + | hypothetical protein TERM 6014 4572229 - 4572269 + G 71 -6.1 -4.2828 | gap 1, overlap 4572227 4572232 CAGCGGCTTTGAGCT GTGTCGGCAGTTGCTGGA ACGCCA TCCTGCG-CTGCCGATTC TTTTCCTGACTGCCC TERM 6015 4572232 - 4572266 + G 81 -8.6 -4.26327 | gap 1, overlap 4572227 4572229 CGGCTTTGAGCTGTG TCGGCAGTTGCTGGA ACGCCA TCCTGCG-CTGCCGA TTCTTTTCCTGACTG creB 4572035 - 4572724 + | DNA-binding response regulator CreB TERM 6016 4573676 - 4573652 - g 73 -9.1 -3.85817 | opp_overlap 4573663, overlap 4573638 4573653 AGGCGCTGGTAGAAA CCCTGCTGCGC CAG GCGCGGCTGGA AAACCGGCAGGATAT TERM 6017 4573965 - 4573978 + G 77 -8.1 -4.10007 | TGGTATTCCTGATTT TGCGC TGCC GCGCA TTTTCGACCGATTCT creC 4572724 - 4574148 + | sensory histidine kinase CreC TERM 6018 4574383 - 4574351 - g 81 -14.2 -2.62616 | gap 1 CTATTCGTCAGAGTA CCAGCGGCCCG-CAA AAGG TTGTCGGCCCGCTGG TGGCGGTTCCGGTGA creD 4574206 - 4575555 + | hypothetical protein sthE 4576698 - 4575613 - | putative major fimbrial subunit TERM 6019 4575657 - 4575677 + g 70 -5.3 -4.46212 | overlap 4575649 4575659 TGGCATTCGCTTGCC CGGCCGTTA CCG TGGCGGCGG TTTTATAGTAGCGCG TERM 6020 4575834 - 4575824 - G 83 -8.2 -4.41348 | overlap 4575825 4575826 CTGTCGGTAAAGAAA CCGG CGT CCGG CGCCTGAATACCCAA sthD 4577296 - 4576739 - | putative fimbrial subunit sthC 4579851 - 4577314 - | putative fimbrial usher protein TERM 6021 4579266 - 4579279 + g 70 -6.7 -4.20106 | overlap 4579254 TACCAGGGCGCAGGT TAGCG TATT CGCTA TTTTCCGTCCGGTTT sthB 4580580 - 4579897 - | putative fimbrial chaperone protein sthA 4581196 - 4580651 - | putative fimbrial protein SPA4406 4582201 - 4581530 - | putative transcriptional regulator protein TERM 6022 4582559 - 4582514 - R 74 -6 -4.70046 | gap 1, overlap 4582518 GAGAAAAGTACAAAA TGCAGGCGGGCGGCGTTTTAC TGAGC GCAAT-CGCCGCCTGCCGGAA CTCCTCCCGGCGGGA TERM 6023 4583113 - 4583139 + r 95 -10.9 -4.70879 | opp_overlap 4583113 GGGGGACATAAGAAA CAGCCAGTAAG AATAA CTTACCGGCTG TTTTTACGGTTTGGC TERM 6024 4583139 - 4583113 - R 100 -13.1 -4.38927 | opp_overlap 4583113 GGGGGACATAAGAAA CAGCCAGTAAG AATAA CTTACCGGCTG TTTTTACGGTTTGGC arcA 4583883 - 4583167 - | two-component response regulator yjjY 4583979 - 4584119 + | hypothetical protein TERM 6025 4584721 - 4584733 + G 74 -7.7 -4.13767 | CCCTTGCCGACGCGC TCCAC GAT GTGGA TTTTACCGTAGCGAC lasT 4584519 - 4585205 + | putative RNA methyltransferase