TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.465394 %AT, 3958824 nt, 37903 terms. Intergenic: 0.533817 %AT, H2T: 653665 nt, 5694 terms; T2T: 191286 nt, 4234 terms; H2H: 279906 nt, 3890 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|198241636|ref|NC_011204.1| Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence (length 74551) TERM 1 143 - 153 + G 73 -5.4 -4.57569 | opp_overlap 143 TTGCCTGTGATACTA TGAC CGG GTCA TTTTTCAGAGCATGG SeD_B0001 115 - 240 + | hypothetical protein TERM 2 520 - 536 + T 87 -10.9 -3.88232 | opp_overlap 518 GGCATAAAAAACTGC CACTGGT GAT ACCAGTG TTGTTCTATACGGGG TERM 3 1583 - 1568 - T 74 -3.9 -4.93898 | ACATCACGAGAAAAA CGCCG TTGCTT CAGCG CAGTCGCCAGCCAGC TERM 4 1752 - 1738 - T 76 -4.3 -4.91712 | CGCAAGTCAGAAAAA TGATG TAATT CATCA GGCATAATCAGCACA SeD_B0004 2171 - 1770 - | hypothetical protein SeD_B0005 2277 - 2158 - | hypothetical protein SeD_B0007 3906 - 2791 - | TlpA TERM 5 4700 - 4655 - R 100 -13.7 -3.74693 | opp_overlap 4656 4666, overlap 4659 GCGCAGGGGATTAAA TGCATGATTAATGCTAATGTA TGCG TACATTAGCATTAATCACATA AGTCAGTGAAAATAA TERM 6 4696 - 4659 - R 100 -18.9 -2.67981 | opp_overlap 4656 4666, overlap 4655 AGGGGATTAAATGCA TGATTAATGCTAATGTA TGCG TACATTAGCATTAATCA CATAAGTCAGTGAAA TERM 7 4666 - 4689 + r 77 -11.2 -3.16881 | opp_overlap 4659 4655, overlap 4656 TAAATGCATGATTAA TGCTAATGTA TGCG TACATTAGCA TTAATCACATAAGTC SeD_B0009 4897 - 4763 - | hypothetical protein TERM 8 5065 - 5055 - H 70 -2.4 -4.99134 | ACTGCAAATGAAAAA TGCC ACC GGCT CACATTAAGTGACAA TERM 9 5365 - 5375 + G 70 -6.8 -4.12532 | overlap 5348 CTGAAACAAACTCTT GCAG TAT CTGC TTTGTCTGTCACCGG TERM 10 5961 - 5949 - g 71 -4.8 -4.62904 | AAACATCCGCAAAAA CAGC CCGGT GCTG AAACAACTGGAAGAT SeD_B0010 5308 - 6048 + | Mig5 TERM 11 6153 - 6168 + F 72 -3.2 -5.06505 | opp_overlap 6153, overlap 6155 6161 TACACCCAAAACGCA CAGTCT GGTG AGACAG TTTTTCTGTCTCATT TERM 12 6161 - 6181 + F 80 -9.8 -3.95126 | opp_overlap 6153, overlap 6155 6153 AAACGCACAGTCTGG TGAGACAG TTTTT CTGTCTCA TTTGGGTTGTTTTTA TERM 13 6374 - 6360 - g 72 -3.5 -4.83169 | gap 1, overlap 6361 ATTCGTGCAGAAAAA GCCAGC GGAA GC-GGC CGGACCGGAAGGAGC SeD_B0011 6255 - 6815 + | RlgA TERM 14 7104 - 7081 - g 95 -10.2 -4.62622 | CGAACCACAAATAAA TCCGGCCGCC ATCT GTCGACCGGA CGGGCAATACAGCTG SeD_B0013 6799 - 8463 + | integrase, catalytic region TERM 15 8833 - 8822 - g 71 -7.2 -4.05875 | opp_overlap 8821 8822, overlap 8823 GTCAAAAAAGGCAAA CGCC CGGT GGCG CTGTTTGTTGATGAA TERM 16 8996 - 9008 + G 75 -6.3 -4.62069 | ATGGAGGAAATTGGC TATCG TAC CGATA TTTTTACACTGGACG SeD_B0014 8453 - 9421 + | type II secretion system protein TERM 17 9508 - 9518 + T 70 -2.4 -4.99134 | TTATCACCTAATGTG AGCC GGT GGCG TTTTTCATTTGCAGT SeD_B0015 10647 - 9610 - | ransposase of TERM 18 10127 - 10117 - G 70 -5.4 -4.38712 | TTCATCCTGATAAAA CACA GGA TGTG CAGTCTGCTCCTGAG SeD_B0016 10992 - 10855 - | hypothetical protein SeD_B0017 11173 - 12147 + | virulence genes transcriptional activator SeD_B0018 12250 - 12104 - | hypothetical protein TERM 19 12618 - 12632 + H 72 -5 -4.65263 | overlap 12597 12596 GACATTATCAGTCTT CAGGAT TTC ATTCTG TTTATTTTCAGGAGT SeD_B0020 12659 - 13426 + | 28.1 kDa virulence protein SeD_B0021 13380 - 13556 + | hypothetical protein TERM 20 13596 - 13565 - T 72 -5.8 -4.5442 | opp_overlap 13570, overlap 13567 13569 13570 GCTGTAAGCAGAAAA TATACCTGGCCATC GTCA GACGGCCAGTTTCA GGAGATAGTGTATGT TERM 21 13592 - 13569 - T 72 -8.8 -3.51909 | opp_overlap 13570, overlap 13567 13565 13570 TAAGCAGAAAATATA CCTGGCCATC GTCA GACGGCCAGT TTCAGGAGATAGTGT TERM 22 13570 - 13591 + T 75 -10.1 -3.54741 | opp_overlap 13569 13567 13565 13570 AAGCAGAAAATATAC CTGGCCATC GTCA GACGGCCAG TTTCAGGAGATAGTG TERM 23 13591 - 13570 - T 78 -12.3 -2.70061 | opp_overlap 13570, overlap 13569 13567 13565 AAGCAGAAAATATAC CTGGCCATC GTCA GACGGCCAG TTTCAGGAGATAGTG TERM 24 14904 - 14890 - T 74 -5.7 -4.70515 | opp_overlap 14889 CACAGGCAAAAGAAA CTCTG CTCTC CAGAG ACTATCTTTCCACAA SeD_B0023 15657 - 15511 - | hypothetical protein SeD_B0024 15808 - 16395 + | phosphothreonine lyase OspF SeD_B0025 16449 - 16568 + | hypothetical protein TERM 25 16979 - 16989 + G 72 -4 -4.77036 | AGACAGCGCCATTGT TGAT AAA ATCA TTTTTGGTCATGAGC SeD_B0026 16656 - 17306 + | virulence protein VsdE TERM 26 17396 - 17375 - T 75 -10.1 -3.54307 | gap 1, overlap 17376 AAGATCCGCTGTAAA CCCTCGCCCA ATG CGGGCG-GGG ATATAAGGCGAAAAG TERM 27 17396 - 17376 - T 71 -10.3 -2.72263 | overlap 17375 AGATCCGCTGTAAAC CCTCGCCCA ATG CGGGCGGGG ATATAAGGCGAAAAG TERM 28 17421 - 17411 - T 79 -8.2 -4.23007 | opp_overlap 17411 GATATAAGGCGAAAA GCCC GAA GGGC TTTAGGGCAGGCTAC SeD_B0027 17858 - 17433 - | transposase TERM 29 18760 - 18777 + r 71 -6.9 -4.08216 | GACGCTCTTCGTAGT CCTCCAC ATCC GGGGAGG TTTTCCAGCCGGTCA TERM 30 19477 - 19499 + r 73 -7.6 -4.16943 | opp_overlap 19455, overlap 19480 GCCTCCCGGACCGGG CAGGCTGCCT GCC AGGCGGCTAG TTTTGCCGTATCACC SeD_B0031 19940 - 19452 - | hypothetical protein SeD_B0032 20678 - 19965 - | putative cyclic diguanylate phosphodiesterase (EAL) domain protein SeD_B0033 21469 - 20687 - | Rsd TERM 31 21115 - 21152 + g 88 -11.3 -4.08394 | gap 1, opp_overlap 21095 21094, overlap 21117 CCAAGCGGTGGGGCT GGCTGCC-GGACGGCA TCCGTCC TGCCGTTCTGGCCGCC TTTTCCGCCCGCTGT TERM 32 21117 - 21141 + g 74 -11.3 -3.30903 | opp_overlap 21095 21094, overlap 21115 AAGCGGTGGGGCTGG CTGCCGGACGG CAT CCGTCCTGCCG TTCTGGCCGCCTTTT SeD_B0034 22025 - 21504 - | hypothetical protein SeD_B0035 22312 - 22022 - | hypothetical protein SeD_B0036 22619 - 22314 - | cytotoxic protein CcdB SeD_B0037 22839 - 22621 - | hypothetical protein SeD_B0038 22916 - 23056 + | hypothetical protein SeD_B0040 23177 - 23061 - | hypothetical protein SeD_B0039 23166 - 23294 + | hypothetical protein SeD_B0041 23287 - 23400 + | hypothetical protein SeD_B0042 24374 - 23553 - | VagD TERM 33 24276 - 24255 - G 84 -5.8 -5.07652 | CGCTGTAAAACAAAA TGTGCGGA GGCGTT TCCGCTCA CGGCCTCCCGGTATG SeD_B0043 24447 - 24734 + | hypothetical protein SeD_B0044 25657 - 24809 - | SrgB TERM 34 25126 - 25147 + g 72 -3.7 -4.72007 | AGTCATGGCTGTGGT CCGTTTC TAAAAAAC GAAGCGG TTTCTTTTCCTGCGC TERM 35 25598 - 25579 - G 70 -10 -3.39908 | gap 1, overlap 25577 25575 25580 TTTCCGGAAAATACA GTGTGGCCG CAC CGGCCAC-C ATCAGAAGAGCGCCA TERM 36 25615 - 25627 + g 90 -4.7 -5.30616 | TCAGAAGAGCGCCAG CCAGC AGT GCCGG TTTTTGTTTAAGTAA SeD_B0045 25829 - 25683 - | hypothetical protein SeD_B0046 25938 - 25819 - | hypothetical protein SeD_B0047 26317 - 26105 - | hypothetical protein SeD_B0048 26974 - 26390 - | hypothetical protein SeD_B0049 27812 - 27099 - | K88 minor fimbrial subunit FaeJ SeD_B0050 28087 - 27812 - | hypothetical protein TERM 37 27872 - 27858 - G 84 -3.4 -5.43866 | opp_overlap 27862, overlap 27860 27862 GAACTGTCAAAAAAA GAGCGG CCA CCGGCC TCATATAAAGCAGCA TERM 38 27874 - 27860 - G 74 -7 -4.35085 | opp_overlap 27862, overlap 27858 27862 ACTGTCAAAAAAAGA GCGGCC ACC GGCCTC ATATAAAGCAGCAGA TERM 39 28062 - 28004 - G 95 -5.4 -5.38958 | gap 4, overlap 28006 28038 ACTCACAAAGAAAAA CACGCCGTCAGCCCGCTCCA-GCCCCAC AAAAACG GCGGGGCCCGGAACGGG-TGACCG-G-G GGCCTGCAGCCTTAC TERM 40 28062 - 28006 - G 91 -11.6 -4.31946 | overlap 28004 28038 TCACAAAGAAAAACA CGCCGTCAGCCCGCTCCA-GCCCCAC AAAAACG GCGGGGCCCGGAACGGG-TGACCGGG GGCCTGCAGCCTTAC SeD_B0051 28838 - 28074 - | minor fimbrial subunit SeD_B0052 29663 - 28866 - | minor fimbrial subunit TERM 41 29276 - 29231 - G 88 -9.7 -4.43877 | opp_overlap 29232, overlap 29227 29232 CAAGGGTGAAAGAAA GCTGTCCCGCCACGTGACC GTTCTCCG GGTTACGTACCGGGACAGA GGCGCGGAAGTGTTG TERM 42 29275 - 29232 - G 87 -13.2 -3.25603 | opp_overlap 29232, overlap 29227 29231 AAGGGTGAAAGAAAG CTGTCCCGCCACGTGACC GTTCTCCG GGTTACGTACCGGGACAG AGGCGCGGAAGTGTT TERM 43 29430 - 29412 - G 80 -10.2 -3.85817 | ATGGCCTTCCAGAAA CGGCAGGG AGC CCTTGCCG CGTAAATCAAAAACC SeD_B0053 30222 - 29899 - | hypothetical protein SeD_B0054 30313 - 30471 + | hypothetical protein TERM 44 30652 - 30626 - g 85 -9.4 -4.4891 | overlap 30627 TTCACTACTATAAAA TTCAGGCCGG TTGTATT CCGGCCTGAG ACGTAGGAAATAATT TERM 45 30651 - 30627 - g 83 -12.9 -3.28864 | overlap 30626 TCACTACTATAAAAT TCAGGCCGG TTGTATT CCGGCCTGA GACGTAGGAAATAAT SeD_B0055 30515 - 30658 + | hypothetical protein SeD_B0056 30802 - 30939 + | hypothetical protein SeD_B0057 31630 - 32289 + | hypothetical protein SeD_B0058 32325 - 33119 + | hypothetical protein SeD_B0063 34576 - 34454 - | hypothetical protein TERM 46 34623 - 34585 - H 100 -13.6 -4.3129 | opp_overlap 34585 CATTCATTATTAAAA GCGACTCCATTCCGGCCC TTT GGGCCGGGGCGGCGGCGC TTTTCAGTGGTGGGA TERM 47 34585 - 34623 + H 100 -15.8 -4.21194 | opp_overlap 34585 CATTCATTATTAAAA GCGACTCCATTCCGGCCC TTT GGGCCGGGGCGGCGGCGC TTTTCAGTGGTGGGA SeD_B0064 34604 - 34771 + | hypothetical protein SeD_B0065 34746 - 34865 + | hypothetical protein SeD_B0066 35146 - 34931 - | hypothetical protein TERM 48 35124 - 35139 + g 90 -10.4 -4.33675 | opp_overlap 35123 35122, overlap 35132 35135 AGACGTACAAAATCC TCCGGC GTCA GCCGGA TTTTCATAATCTGGT SeD_B0067 36027 - 35158 - | IncFII RepA protein TERM 49 35354 - 35367 + g 74 -9.5 -3.6682 | CTGTCCGCGTCACGC CGCGC CCGG GCGCG TTTCAGTCCGTGCAG TERM 50 36149 - 36193 + r 87 -7.3 -5.1417 | gap 1 TACAGTTTAAGTAGG CCCCGTTAATCTT-CTGTCC CGCCAA GAATAGAAAGATTATCGGGG TTTTTGCTTTTCTGG SeD_B0070 36590 - 36345 - | DNA replication protein TERM 51 37193 - 37177 - R 72 -5 -4.56597 | CCCTCCGGTGAAAAA CCGGCC TAAAC GGACGG TGCCGCAATAGCTGG SeD_B0073 37436 - 37317 - | hypothetical protein SeD_B0074 37851 - 37399 - | dsba oxidoreductase TERM 52 37992 - 38003 + r 77 -7.2 -4.43859 | CTGCGCCAGCACCGC GCGG AGTT CCGC TTTTCTGGCGTTCTG SeD_B0075 38531 - 37968 - | FinO TERM 53 38289 - 38273 - G 75 -11.5 -3.34398 | opp_overlap 38286, overlap 38249 38271 TGTCGCCGTCAAACA GCCCCGG CCA CCAGGGC TTCAGGGTGCTGACG traX 39326 - 38586 - | type-F conjugative transfer system pilin acetylase TraX TERM 54 38881 - 38837 - G 72 -11.4 -3.07522 | gap 1, opp_overlap 38857, overlap 38840 ACAGCCGGTAACAGA TGACCAGCACCAGC-ACGCCG GCAA CGCCGTAGCTGGTTCCGGACA GGGGTATCCACGCCG TERM 55 38878 - 38840 - G 72 -11.7 -2.7535 | gap 1, opp_overlap 38857, overlap 38837 GCCGGTAACAGATGA CCAGCACCAGC-ACGCCG GCAA CGCCGTAGCTGGTTCCGG ACAGGGGTATCCACG traI 43632 - 39346 - | conjugative transfer relaxase protein TraI TERM 56 39555 - 39566 + g 79 -7.2 -4.46212 | CGGCAATCTCTCTGA CCGC CTGC GCGG TTTTCTCCTCCGGCA TERM 57 41007 - 41017 + g 72 -2.4 -4.84359 | CGGGCACATCCGGAA AGGC TTC GCCC TTTTTCTCCGCCTCC TERM 58 41955 - 41971 + g 77 -3.6 -4.98531 | CCGTCAGCAGCTCCA CCTGAC TGAAT GCCAGG TTTTTACTTTCCACC TERM 59 42605 - 42618 + g 71 -8.1 -3.89614 | opp_overlap 42604 CGGTCAATCACATAC CGGTC ATGG GACCG TTTCTCCGGGTTCCA TERM 60 42868 - 42851 - G 74 -6.9 -4.37092 | overlap 42853 ACCGCGGCCACAAAA TCCCCGG CCAG CCGGGCA TAGCGGACATTCCGG TERM 61 43565 - 43551 - G 76 -12.8 -2.70932 | opp_overlap 43561 GGGCTTTCTCAATCA CGCCGG CTT CCGGCG GCAGCATGCCAACCG SeD_B0078 43658 - 44320 + | TnpR TERM 62 44431 - 44455 + F 77 -10.6 -3.43217 | opp_overlap 44431 TATGTTTTTATTAAA GGCCGGAGGT GGTTA GCCCCCGGCC TTAGTTACGTTTCCG TERM 63 44455 - 44431 - f 93 -12.1 -3.72893 | opp_overlap 44431 TATGTTTTTATTAAA GGCCGGAGG TGGTTAG CCCCCGGCC TTAGTTACGTTTCCG TERM 64 44859 - 44808 - f 71 -7.4 -3.88029 | opp_overlap 44816 44820 44825, overlap 44806 44809 44820 44825 ACGCTACACAAAACA CCCGTTACACCACTAAATGTGGTT CCTT AACCACATTTAGTTGCTTTACAGC ACCATAGTGAATAAA TERM 65 44858 - 44809 - f 74 -10.9 -2.92094 | opp_overlap 44816 44820 44825, overlap 44808 44806 44820 44825 CGCTACACAAAACAC CCGTTACACCACTAAATGTGGTT CCTT AACCACATTTAGTTGCTTTACAG CACCATAGTGAATAA TERM 66 44816 - 44851 + F 79 -10.6 -3.53444 | opp_overlap 44809 44808 44806 44820 44825, overlap 44820 44825 CAAAACACCCGTTAC ACCACTAAATGTGGTT CCTT AACCACATTTAGTTGC TTTACAGCACCATAG TERM 67 44820 - 44847 + F 95 -14.4 -3.51232 | opp_overlap 44820 44809 44808 44806 44825, overlap 44816 44825 ACACCCGTTACACCA CTAAATGTGGTT CCTT AACCACATTTAG TTGCTTTACAGCACC TERM 68 44847 - 44820 - f 86 -14.4 -2.62735 | opp_overlap 44816 44820 44825, overlap 44809 44808 44806 44825 ACACCCGTTACACCA CTAAATGTGGTT CCTT AACCACATTTAG TTGCTTTACAGCACC TERM 69 44825 - 44842 + F 76 -8.5 -4.04394 | opp_overlap 44825 44820 44809 44808 44806, overlap 44820 44816 CGTTACACCACTAAA TGTGGTT CCTT AACCACA TTTAGTTGCTTTACA TERM 70 44842 - 44825 - f 72 -8.5 -3.81951 | opp_overlap 44820 44816 44825, overlap 44820 44809 44808 44806 CGTTACACCACTAAA TGTGGTT CCTT AACCACA TTTAGTTGCTTTACA TERM 71 44935 - 44975 + F 79 -11.3 -3.45757 | opp_overlap 44946 44947, overlap 44936 44947 AACTCAAGGCTGGAA AACACAAAAAAGCCCGATT ACC AGTCGGGTTTTTTTGTGCC TGTTGTTCAGTTGTA TERM 72 44936 - 44974 + F 86 -14.8 -2.66731 | opp_overlap 44946 44947, overlap 44935 44947 ACTCAAGGCTGGAAA ACACAAAAAAGCCCGATT ACC AGTCGGGTTTTTTTGTGC CTGTTGTTCAGTTGT TERM 73 44964 - 44946 - f 86 -3 -5.63645 | opp_overlap 44936 44935 44947, overlap 44947 GGAAAACACAAAAAA GCCCGATT ACC AGTCGGGT TTTTTTGTGCCTGTT TERM 74 44947 - 44963 + F 100 -8.7 -5.65177 | opp_overlap 44947 44946, overlap 44936 44935 GAAAACACAAAAAAG CCCGATT ACC AGTCGGG TTTTTTTGTGCCTGT TERM 75 45012 - 45029 + G 89 -2.7 -5.4505 | overlap 45004 TTTTTCCCCTTCATT TGAGGGA TTTT TCTTTCA TTTTTTGTTGCGGCC SeD_B0079 44971 - 45099 + | hypothetical protein TERM 76 45086 - 45105 + F 73 -2.1 -5.10497 | opp_overlap 45077 45074, overlap 45077 GAACGATGCCGTTAC CGGCATT ATCATG AATCCCG TTTTTTCAGTAAGTT SeD_B0080 45176 - 45292 + | hypothetical protein SeD_B0081 45398 - 46525 + | hypothetical protein TERM 77 46622 - 46634 + G 70 -3.4 -4.74103 | opp_overlap 46622 GCTTCAGGGTTAAAA GTCT CTAAC AGAC TTTTTAAATTGCCGA SeD_B0082 46541 - 46696 + | hypothetical protein TERM 78 47248 - 47265 + T 74 -7.1 -4.2757 | overlap 47246 AAGCTGTTGTTGCTA TGAATAG TACA CTATTCA TTATGTTTTTTTAAC SeD_B0084 47489 - 47373 - | hypothetical protein TERM 79 47417 - 47434 + g 85 -4.7 -5.24129 | AATCGTATGTTTCTA GCAGTCC ATCG GGGCGGC TTTTTTGTGAGCGAA TERM 80 47660 - 47682 + r 70 -9.9 -3.06694 | overlap 47659 TGACCACGTTGTTCA TGCCGGACA TACAC TGTTCGGCA CTTTTAAAGGTAAGT SeD_B0086 48488 - 48282 - | hypothetical protein SeD_B0087 50638 - 48485 - | DNA topoisomerase III TERM 81 49181 - 49191 + g 80 -4.6 -5.00467 | TTCAGTAAATAATGG CGGC GGT GTCG TTTTCTTCTTATTAA SeD_B0088 51218 - 50643 - | hypothetical protein SeD_B0089 51368 - 51222 - | hypothetical protein TERM 82 51457 - 51482 + r 73 -11.3 -2.73483 | opp_overlap 51457 51454, overlap 51462 GATTGTAACTAATCA TCACATTTCGT TGGC GCGAAATGTGA TACTTGCAGTACCCT TERM 83 51482 - 51457 - R 72 -10.6 -2.84574 | opp_overlap 51457 51462, overlap 51454 GATTGTAACTAATCA TCACATTTCG TTGGCG CGAAATGTGA TACTTGCAGTACCCT TERM 84 51495 - 51522 + r 100 -16.4 -4.42639 | TGATACTTGCAGTAC CCTGATACCCGT TGGC GCGGGTATCAGG TTTTAATTAACCTCT SeD_B0090 51831 - 51529 - | killer protein SeD_B0091 52241 - 51828 - | hypothetical protein TERM 85 52048 - 52022 - G 79 -3.1 -5.27923 | gap 1, opp_overlap 52030, overlap 52030 CAACGGCATAAAAAA CAGAATCATCGT AAAG ACGATT-TTCTG GTTTAAAACTAGGTA TERM 86 52030 - 52041 + g 71 -4.4 -4.61566 | opp_overlap 52030 52022 TAAAAAACAGAATCA TCGT AAAG ACGA TTTTCTGGTTTAAAA TERM 87 52260 - 52278 + r 100 -8.8 -5.79595 | overlap 52261 AAAACCTCAGACTCC AGCTCTCC TAC GGAGAGCA TTTTTTCTTTTGACG TERM 88 52261 - 52277 + r 95 -12.3 -4.0613 | overlap 52260 AAACCTCAGACTCCA GCTCTCC TAC GGAGAGC ATTTTTTCTTTTGAC SeD_B0092 54073 - 52238 - | TaxB TERM 89 53258 - 53245 - G 70 -5.2 -4.43501 | opp_overlap 53232, overlap 53232 AACCGATTGAGAAAA CGGG TTTAAG CCCG AACTCATTAAGCCAG TERM 90 54549 - 54527 - R 79 -8.5 -4.19624 | opp_overlap 54531 TATCTTCAATAGAAA TACACCGCA GATGA TGCGGTATA TATTCCAGACAGGCA SeD_B0095 56313 - 55108 - | pilx10 protein TERM 91 55668 - 55649 - G 82 -5 -4.99645 | gap 1, overlap 55650 55651 55666 AGGTCAGAAACAAAA CGCCTGTCC AGT GAACAGG-G AATTGATGTCCCTTC TERM 92 55880 - 55896 + g 71 -4.3 -4.64861 | overlap 55877 GAAACATCAAGTGCA CGGCTGA AGC TCTGCTG TTTATTTTCCGGCGG TERM 93 55916 - 55935 + g 90 -5 -5.16841 | TTTTCCGGCGGTTCA GTCTTTTC AGAA GAAATGAC TTTTTCTTCCTCTGG SeD_B0096 57239 - 56310 - | pilx9 protein SeD_B0097 57957 - 57244 - | pilx8 protein TERM 94 57692 - 57702 + g 77 -4 -5.00884 | ATGGCTTCGTTTTCA GAAA GAT TTTC TTTTTTAACAGAAGT SeD_B0098 58233 - 58117 - | hypothetical protein SeD_B0099 59335 - 58202 - | pilx6 protein TERM 95 59283 - 59260 - GR 74 -10.2 -3.26204 | opp_overlap 59260, overlap 59262 59263 AATTAAACCCAGGAA CACCTCCCGC ATTT GCGGGAGAGG TTACATTACCTGATA TERM 96 59281 - 59262 - GR 77 -11.4 -3.18776 | opp_overlap 59260, overlap 59260 59263 TTAAACCCAGGAACA CCTCCCGC ATTT GCGGGAGA GGTTACATTACCTGA TERM 97 59280 - 59263 - GR 78 -12.7 -2.50784 | opp_overlap 59260, overlap 59262 59260 TAAACCCAGGAACAC CTCCCGC ATTT GCGGGAG AGGTTACATTACCTG SeD_B0100 59572 - 59345 - | Eex protein SeD_B0101 60331 - 59573 - | pilx5 protein TERM 98 59720 - 59746 + g 70 -8.8 -3.65046 | opp_overlap 59726 GCGATACATTTGATA CTGAAATTTGAG CTT CTCGAACTTCAG TTGTTCAAGTGCAAC SeD_B0102 62972 - 60342 - | pilx4 protein TERM 99 60501 - 60465 - G 78 -11.7 -3.24597 | overlap 60463 60466 AACCGGTAAGTAATA CGCTGCTTTTCCCAG CTCCAGT CTGGCAAAAGCAGCA AAATCATCACTTTCA TERM 100 60500 - 60466 - G 75 -13 -2.54276 | overlap 60465 60463 ACCGGTAAGTAATAC GCTGCTTTTCCCAG CTCCAGT CTGGCAAAAGCAGC AAAATCATCACTTTC TERM 101 63051 - 63027 - R 83 -9.1 -4.19678 | opp_overlap 63026 63027 GCACATTCCAAGAAA GGGGTAGAGCG GAA CGCCCAGCCCC CTTATTAAAGCAGGG SeD_B0103 63410 - 63114 - | pilx2 protein TERM 102 63338 - 63328 - G 70 -6.8 -4.12456 | ACATCATCCGCAAAA GCAG GTT CTGC AACACAAAGCATCAA SeD_B0104 64035 - 63388 - | pilx1 protein SeD_B0105 64280 - 64068 - | hypothetical protein TERM 103 64250 - 64260 + g 81 -8.2 -4.27483 | AGAGTACATTGCGTT GCGG TTT CCGC TTTCCTTTTATAGCT TERM 104 64784 - 64760 - R 79 -8 -4.4195 | gap 1, opp_overlap 64767, overlap 64750 ACAGATGTGACAAAA CACAAGCCAAC CGTG GTTG-CTTGTG AGAAATCACGCCCCT SeD_B0106 66255 - 65074 - | relaxase/Mobilization nuclease domain protein TERM 105 65293 - 65317 + g 70 -2.7 -4.82901 | CTCATTTCTGTGAAC CGTTTTCCAGC CAT GCTGAACACCG TTTTTATCGAGCGCC SeD_B0107 66872 - 66258 - | hypothetical protein TERM 106 66838 - 66888 + g 100 -19.2 -2.80816 | overlap 66845 CGACTGTAGGTCACC GGGCAAACGTTGCGGAATGGCG CAAGAGA CGTCATTTTGCGGCGTTTGCCC TATCCTGCATCGCAG TERM 107 67119 - 67096 - g 83 -10.3 -4.06505 | gap 1, opp_overlap 67089, overlap 67099 GCAATATATCAGAAA GCACCTCCCG AAATA CGGGAGG-GC TTCGGCTATTCAGCT TERM 108 67117 - 67099 - g 76 -11.7 -3.05982 | opp_overlap 67089, overlap 67096 ATATATCAGAAAGCA CCTCCCG AAATA CGGGAGG GCTTCGGCTATTCAG SeD_B0108 66928 - 67263 + | hypothetical protein TERM 109 67591 - 67625 + G 88 -10.1 -4.42594 | overlap 67593 67594 AATAGAATCAGGTGT CACGGTATCAGGTTG CCCCA CAACCTGATACCATC TTTATCTTTACTTTA SeD_B0109 67244 - 67618 + | hypothetical protein TERM 110 67593 - 67623 + T 93 -12.7 -3.79096 | overlap 67591 67594 TAGAATCAGGTGTCA CGGTATCAGGTTG CCCCA CAACCTGATACCA TCTTTATCTTTACTT TERM 111 67594 - 67622 + T 93 -16.2 -2.85831 | overlap 67593 67591 AGAATCAGGTGTCAC GGTATCAGGTTG CCCCA CAACCTGATACC ATCTTTATCTTTACT SeD_B0110 67812 - 67633 - | hypothetical protein TERM 112 67832 - 67846 + r 79 -11.4 -3.46824 | opp_overlap 67832 AGACCTTTACTAAAA GGGGGA ATA TCCCCC TTGATTAATTAGTAG TERM 113 67846 - 67832 - R 91 -11.4 -4.26344 | opp_overlap 67832 AGACCTTTACTAAAA GGGGGA ATA TCCCCC TTGATTAATTAGTAG SeD_B0111 68184 - 67855 - | hypothetical protein TERM 114 68242 - 68279 + r 85 -5.7 -5.40474 | opp_overlap 68254, overlap 68245 68246 TGTTTCCCTTTCTTG TGTTTTATTATACCTGC ATTT GCAGGTATAACAAGTTA TTTTTTTACCAGCCT TERM 115 68245 - 68276 + r 100 -9.6 -4.79949 | opp_overlap 68254, overlap 68242 68246 TTCCCTTTCTTGTGT TTTATTATACCTGC ATTT GCAGGTATAACAAG TTATTTTTTTACCAG TERM 116 68246 - 68275 + r 79 -10.9 -3.46885 | opp_overlap 68254, overlap 68245 68242 TCCCTTTCTTGTGTT TTATTATACCTGC ATTT GCAGGTATAACAA GTTATTTTTTTACCA SeD_B0112 68492 - 68277 - | YajA protein SeD_B0113 68727 - 68482 - | hypothetical protein TERM 117 68750 - 68764 + r 91 -8.5 -5.03994 | opp_overlap 68750, overlap 68744 CTCATAACTAAAAAA GGGGC TTAAT GCCCC TTTTTATCTATAACA TERM 118 68764 - 68750 - R 100 -8.5 -5.32944 | opp_overlap 68750 68744 CTCATAACTAAAAAA GGGGC TTAAT GCCCC TTTTTATCTATAACA SeD_B0114 69161 - 68772 - | hypothetical protein TERM 119 69172 - 69188 + r 78 -5.9 -4.79223 | opp_overlap 69166, overlap 69166 TTCACTATACCTGCA TTTGCAG GTA TTGCAAA TTTTTAATGCTCTCG SeD_B0115 69522 - 69241 - | putative stability protein StbE SeD_B0116 69763 - 69512 - | putative stability protein StbD SeD_B0117 69960 - 69760 - | hypothetical protein TERM 120 69882 - 69904 + g 76 -3.3 -5.12707 | opp_overlap 69882 GACATCGTCTTAAAA CGCTCTGTA ACACG TTCTGAGCG TTTTTTCCCGTTTCG TERM 121 70411 - 70427 + r 89 -5.1 -5.79595 | opp_overlap 70411, overlap 70413 GTTTACGCAAAGTTA TCCACAG GCA CTGTGAA TTTTTTGTTTTGAGC TERM 122 70452 - 70466 + r 89 -5 -5.71638 | TTGAGCAGAGTTATC CACAGA TTT TTTGTG TTTTTTTGCTTATTA TERM 123 70489 - 70543 + r 75 -6.1 -4.37734 | gap 1, opp_overlap 70500 70507, overlap 70492 70493 70498 GCTTATTAAACTTCT TGTTTTTAAGATCTTAAATGTAGATC GGTA GATCTAC-TTTAAGATCTTTAACTTA TTTTAACTTATTCTG TERM 124 70492 - 70540 + r 87 -10 -4.28369 | gap 1, opp_overlap 70500 70507, overlap 70489 70493 70498 TATTAAACTTCTTGT TTTTAAGATCTTAAATGTAGATC GGTA GATCTAC-TTTAAGATCTTTAAC TTATTTTAACTTATT TERM 125 70493 - 70539 + r 83 -13.5 -3.15395 | gap 1, opp_overlap 70500 70507, overlap 70492 70489 70498 ATTAAACTTCTTGTT TTTAAGATCTTAAATGTAGATC GGTA GATCTAC-TTTAAGATCTTTAA CTTATTTTAACTTAT TERM 126 70498 - 70534 + r 95 -13.4 -3.92716 | gap 1, opp_overlap 70500 70507, overlap 70493 70492 70489 ACTTCTTGTTTTTAA GATCTTAAATGTAGATC GGTA GATCTAC-TTTAAGATC TTTAACTTATTTTAA TERM 127 70532 - 70500 - R 73 -10.2 -3.01712 | gap 1, opp_overlap 70498 70493 70492 70489, overlap 70507 TTCTTGTTTTTAAGA TCTTAAATGTAGATC GGTA GATCTAC-TTTAAGA TCTTTAACTTATTTT SeD_B0118 70703 - 70551 - | hypothetical protein SeD_B0119 70921 - 70808 - | hypothetical protein TERM 128 70885 - 70927 + g 89 -9.3 -4.59069 | opp_overlap 70900, overlap 70924 GTGATCCGAGTTTTG GTGGAAATCTATAAGGTGG ATAAA CCACTTTACACATTTCCGC TTTTGTGGTTATGAT TERM 129 71318 - 71345 + G 78 -7 -4.60977 | overlap 71313 71319 TAAATTACCTTCTGA TGCAGTCAGGCT TATG AACTTGACTGCG TTTTGTGATTATGTT TERM 130 71630 - 71640 + G 72 -4 -4.82901 | opp_overlap 71630 TCAGAATTTTAAGGA CTTT AAT AAAG TTTTTCTGCAAAAAA SeD_B0120 70977 - 71813 + | PI protein SeD_B0121 71853 - 72299 + | hypothetical protein TERM 131 72401 - 72351 - f 100 -20.6 -2.80816 | opp_overlap 72358, overlap 72358 72368 CTGCGATGCAGGATA GGGTAAACGCCGCAAAATGACGTC TCT GACGCCATTCCGCAACGTTTGCCC GGTGACCTACAGTCG TERM 132 72394 - 72358 - f 95 -14.5 -3.64599 | opp_overlap 72358, overlap 72351 72368 GCAGGATAGGGTAAA CGCCGCAAAATGACGTC TCT GACGCCATTCCGCAACG TTTGCCCGGTGACCT TERM 133 72384 - 72368 - g 80 -8.7 -4.12942 | opp_overlap 72358, overlap 72358 72351 GTAAACGCCGCAAAA TGACGTC TCT GACGCCA TTCCGCAACGTTTGC SeD_B0122 72367 - 72789 + | hypothetical protein SeD_B0123 73193 - 73014 - | hypothetical protein SeD_B0124 73658 - 73428 - | hypothetical protein SeD_B0125 74330 - 73710 - | plasmid partition protein ParF SEQUENCE gi|198241740|ref|NC_011205.1| Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853, complete genome (length 4842908) TERM 1 1328 - 1351 + G 71 -11 -2.87132 | AAGGGATGATTGGGA TGGCGGCG CGTGTTTT CGCCGCCA TGTCTCGCGCCGGGA TERM 2 1626 - 1646 + G 70 -9.7 -3.36096 | overlap 1623 1619 CAATATCGTGGCGAT CGCTCAGGG ATC TTCTGAGCG TTCCATTTCTGTGGT thrA 337 - 2799 + | aspartokinase/homoserine dehydrogenase I thrB 2801 - 3730 + | homoserine kinase thrC 3734 - 5020 + | threonine synthase SeD_A0005 5887 - 5114 - | protein YaaA TERM 3 5252 - 5238 - G 72 -2.1 -4.89477 | gap 1 TTTTCAATAATAAAA CGG-CT CATC AGTCCG CGCGCTTTTTTGGCG SeD_A0006 7423 - 5966 - | amino-acid carrier protein AlsT TERM 4 6790 - 6802 + g 71 -6.2 -4.37092 | TCAGCCATTGCATCA GGCG GGCGA CGCC TTTTATGCCGCGGAT tal2 7665 - 8618 + | transaldolase mog 8729 - 9319 + | molybdopterin biosynthesis protein Mog SeD_A0009 9942 - 9376 - | membrane protein, GPR1/FUN34/yaaH family TERM 5 9868 - 9854 - G 82 -5.6 -5.03314 | TCCAGGGCGAAAAAA CCGGCA TTG TGCAGG TTAAGCAGAATGGTG TERM 6 10080 - 10057 - R 72 -8.2 -3.69395 | overlap 10066 10074 TCTATGATCTAATAA GGGGGAAA AGAAAATA TTTCCCCC AGTGAGGGCATTCAC SeD_A0010 10805 - 10092 - | positive regulator for sigma H SeD_A0011 11236 - 10841 - | protein YaaI TERM 7 11899 - 11871 - g 70 -5.2 -4.37886 | gap 1, opp_overlap 11870 11871 11874, overlap 11872 11875 TCATGCCGTACAAAA TCAT-CGGCGCCG ACAA CGGCGACGCATGG CTTGATGTGAAAGGT dnaK 11594 - 13510 + | chaperone protein DnaK TERM 8 13532 - 13508 - f 83 -2.1 -5.63645 | opp_overlap 13514 13531, overlap 13512 GTAAAAGATAAAAAA TAATCGCCCTT TGA ACGGGTAATTA CTGGCACGGGCGAAG TERM 9 13531 - 13573 + F 80 -12.6 -3.01924 | opp_overlap 13508 13533, overlap 13539 CTTTGAACGGGTAAT TACTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATGCA TGTTAAGGGCAGATA TERM 10 13571 - 13533 - f 90 -15.2 -2.73542 | opp_overlap 13531 13539 TTGAACGGGTAATTA CTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATG CATGTTAAGGGCAGA TERM 11 13539 - 13565 + F 100 -18 -2.9518 | opp_overlap 13533, overlap 13531 GGGTAATTACTGGCA CGGGCGAAGAGG TTT CCTCTCCGCCCG TGTATGCATGTTAAG TERM 12 13677 - 13664 - g 82 -5.2 -4.98531 | GCGTGAAATCAAAAA GGCG TATAAG CGCC TGGCCATGAAATATC dnaJ 13596 - 14735 + | chaperone protein DnaJ TERM 13 14762 - 14781 + F 100 -11.4 -5.29782 | TTGTATTTTTCTTCA GCCCGGGT GTAT ATCCGGGC TTTTTTCTGCCTGTA SeD_A0014 14847 - 14960 + | hypothetical protein TERM 14 15844 - 15871 + G 83 -10.6 -3.93695 | opp_overlap 15833 TTTATTCAGCCTCCG CCCGAACTGGCT TTGA AGTCAGTTCAGG TTTATGCATCCTGGA SeD_A0015 15016 - 15963 + | putative transcriptional regulator, LysR family SeD_A0016 16132 - 16434 + | putative bacteriophage protein TERM 15 16453 - 16468 + T 79 -9 -4.16146 | TCATTTGCAGTATCA GGCTCA TCCG TGAGCC TTTTACGCGTCTTTT SeD_A0017 17028 - 16495 - | hypothetical protein SeD_A0018 17488 - 17045 - | hypothetical protein TERM 16 17740 - 17751 + H 72 -3 -5.02502 | ACGGTGTTGTTAACC TCAT TTTT ATGA TTTTTATATCATCTA TERM 17 17758 - 17777 + H 74 -5.8 -4.55491 | overlap 17760 TTTTTATGATTTTTA TATCATCT AAAA AGATGATG TTTTGTGATTAGCTA SeD_A0019 17869 - 19968 + | exochitinase TERM 18 20026 - 20009 - f 85 -14.1 -3.09516 | opp_overlap 20009 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG TERM 19 20009 - 20026 + F 100 -14.1 -4.36914 | opp_overlap 20009 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG TERM 20 22844 - 22861 + G 75 -6.3 -4.66163 | gap 1 AGCGCGACTTACGGC GTC-CCGA CCG TCGGCGAC TTTTTACGTAAAGAT SeD_A0020 20060 - 23056 + | putative hydroxymethyltransferase TERM 21 23095 - 23124 + F 95 -11.6 -4.25104 | CTGGACTATTAGTTT GAGATTCGAAGG CGCGTT CTTTCGAATCTC TTTTCCTGCGCCCCC SeD_A0021 23337 - 24041 + | putative cytoplasmic protein SeD_A0022 24471 - 25013 + | fimbrial subunit TERM 22 25008 - 25026 + GF 100 -5.3 -5.69473 | overlap 25022 TTTAGCATGGTTTAT TCCTGAT TCCTT ATCGGGA TTTTTTTCTCGTCTG TERM 23 25090 - 25057 - gf 77 -8.8 -3.89346 | TTGGGAGGCGAGAAA GGGGCGTTACGCGC GTCACT GCGCGTAACAAACC GACGGCATCAGGATA TERM 24 25565 - 25548 - gf 80 -6.9 -4.57073 | overlap 25549 TATCCGCCCGAAAAA TCTGGCG GAGG CGCCAGC TCATGCCCCGTCGAC TERM 25 25564 - 25549 - gf 77 -10.4 -3.33922 | overlap 25548 ATCCGCCCGAAAAAT CTGGCG GAGG CGCCAG CTCATGCCCCGTCGA SeD_A0023 24973 - 25800 + | chaperone protein FimC TERM 26 27561 - 27545 - g 87 -8 -4.60292 | TACAACAATAACAAA TCCGCA GGCGA TGCGGA GCGCGATCAAATTTT SeD_A0024 25805 - 28426 + | outer membrane usher protein FimD TERM 27 29384 - 29370 - g 77 -11.4 -3.51032 | opp_overlap 29379, overlap 29379 ACCCGGTAAGTACAA CAGGCG AAA CGCCTG CGGAAGGGGCGTTTA SeD_A0025 28427 - 29434 + | mannose binding protein FimH SeD_A0026 29474 - 29980 + | fimbrial subunit SeD_A0027 29996 - 30514 + | fimbrial subunit TERM 28 30735 - 30713 - g 100 -10.6 -4.90266 | opp_overlap 30717, overlap 30725 GCCAGGAACCAAAAA CGAAGGGAAT ATC ATGCCCTTCG TGGTCACGCCGCCAT SeD_A0028 30576 - 31211 + | fimbrial chaparone TERM 29 31225 - 31244 + T 82 -11.4 -3.58533 | AACTTTTTTTCAGGC GTCTCCCG ATAG CGGGAGGC TTTCCGAACTTATCG TERM 30 31689 - 31700 + T 80 -7.2 -4.64861 | CTGATTAAGGCGAAC CCGG ATAC CCGG TTTATTTTCAAAGAG SeD_A0031 32995 - 32546 - | hypothetical protein TERM 31 33631 - 33621 - g 70 -6.8 -4.09108 | overlap 33622 TTGAATCTATAGAAA GCAC ACT GTGC GATAAAACAGATGCT TERM 32 34288 - 34271 - g 79 -2.7 -5.16472 | AAAAATGCCAAAAAA CTGATAT CAAC ATTTCAG TCGACCTTTCTTTTT SeD_A0032 33365 - 34369 + | putative transcriptional regulator SeD_A0033 34817 - 34377 - | putative transcriptional regulator TERM 33 34561 - 34548 - G 90 -4.5 -5.41143 | overlap 34549 34550 CACCGTGGAAAAAAA CTGGC TCAG GCCAA AGCCTTTAAGGTCGC TERM 34 34947 - 34963 + G 86 -3.8 -5.3104 | opp_overlap 34943 34958, overlap 34958 ACAAAAATGATGTTT TTTTAG AAAAA CTAAAA TTTTATTTTTAGTCG SeD_A0034 34829 - 34975 + | hypothetical protein TERM 35 34998 - 34958 - f 82 -7.2 -4.82901 | opp_overlap 34947 34958, overlap 34964 GTTTTTTTAGAAAAA CTAAAATTTTATTTTTAG TCGCT CTAAAAATAAAATGATAG TAGTGTTAATTTTTA TERM 36 34992 - 34964 - f 93 -9.2 -4.82678 | opp_overlap 34958, overlap 34958 TTAGAAAAACTAAAA TTTTATTTTTAG TCGCT CTAAAAATAAAA TGATAGTAGTGTTAA SeD_A0035 35340 - 37058 + | arylsulfotransferase TERM 37 37099 - 37063 - T 77 -10.2 -3.44146 | opp_overlap 37047 37058 37056 37066, overlap 37066 TGTTTGCATAACTAA GTATGTTATGCGGCCG GTTAT CGACCGCATAACATTA TGGCTTATTTGCTAA TERM 38 37096 - 37066 - T 93 -16.3 -2.87274 | opp_overlap 37047 37066 37058 37056, overlap 37063 TTGCATAACTAAGTA TGTTATGCGGCCG GTTAT CGACCGCATAACA TTATGGCTTATTTGC TERM 39 37066 - 37096 + T 95 -14.8 -3.49938 | opp_overlap 37063 37066, overlap 37047 37058 37056 TTGCATAACTAAGTA TGTTATGCGGCCGG TTA TCGACCGCATAACA TTATGGCTTATTTGC SeD_A0036 38675 - 37104 - | 5'-Nucleotidase domain protein TERM 40 38739 - 38701 - R 83 -4.5 -5.35815 | overlap 38704 38705 TACATTAAAGAAAAA CAATGCCTGTAGTCGTG TCATT CACGACTACAAACCGGG GAAATTAAGTAATAT TERM 41 38736 - 38704 - R 93 -9.2 -4.74052 | overlap 38701 38705 ATTAAAGAAAAACAA TGCCTGTAGTCGTG TCATT CACGACTACAAACC GGGGAAATTAAGTAA TERM 42 38735 - 38705 - R 85 -12.7 -3.41991 | overlap 38704 38701 TTAAAGAAAAACAAT GCCTGTAGTCGTG TCATT CACGACTACAAAC CGGGGAAATTAAGTA SeD_A0037 39535 - 38774 - | putative outer membrane/exported protein SeD_A0038 40129 - 41622 + | sulfatase TERM 43 41666 - 41701 + F 100 -11.2 -4.86731 | gap 1, overlap 41669 CACTTAGGGCGATGC CCACCTGATCCGGTCAC TCT GTG-CCGGATCAGGTTC TTTTATTTCAGGGAA TERM 44 41669 - 41698 + F 100 -17.3 -4.54026 | gap 1, overlap 41666 TTAGGGCGATGCCCA CCTGATCCGGTCAC TCT GTG-CCGGATCAGG TTCTTTTATTTCAGG TERM 45 42500 - 42513 + G 74 -8.1 -3.99805 | opp_overlap 42479 42481, overlap 42494 42500 42508 GGCGGCCTGGTGCGG CCTGC CGCC GCAGG TTTGCGTTTTTGCGC TERM 46 42500 - 42545 + G 85 -13.1 -3.60296 | opp_overlap 42479 42481, overlap 42494 42500 42508 GGCGGCCTGGTGCGG CCTGCCGCCGCAGGTTTGCGT TTTT GCGCCCACCTGCGGCAGCGCG TTTGCGATGGAAATG TERM 47 42508 - 42519 + G 75 -5.8 -4.56775 | opp_overlap 42481, overlap 42494 42500 42500 GGTGCGGCCTGCCGC CGCA GGTT TGCG TTTTTGCGCCCACCT SeD_A0039 41721 - 42911 + | chondroitin sulfate/heparin utilization regulation protein TERM 48 43368 - 43396 + G 70 -3 -4.78848 | GAATTACAAAAACTG TCCCGTCGCGCT AATCA AGCGGAACGCGA TTTTGTGTTTCCCGC TERM 49 43673 - 43683 + G 83 -8.2 -4.52589 | ATTTGATGTGGATTA CGGC CCC GCCG TTTTATATAAAAACG SeD_A0040 42936 - 44183 + | putative cytoplasmic protein TERM 50 44301 - 44246 - f 72 -4.9 -4.58395 | gap 2, opp_overlap 44245 44260 CGGACGGCTTAAAAA TCCAGAGTATTAATTTTCGTGGTCCCC ATGA GGGG-CGATGAG-ATTAATACACTGGA GATTTATCATGAATA TERM 51 44582 - 44572 - g 87 -8.2 -4.58663 | AGGATGCGGCAAAAA CGGC GAT GCCG GTAGAACATCTTTAC TERM 52 45807 - 45797 - g 74 -6.8 -4.2558 | opp_overlap 45797 CACGTTTGATGAAAA TGGC CGC GCCA TCTCTTGCCAGCCTG SeD_A0041 44310 - 46025 + | arylsulfotransferase TERM 53 46077 - 46060 - f 87 -6.9 -5.15634 | opp_overlap 46060 46056 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 54 46060 - 46077 + F 72 -9.1 -3.56704 | opp_overlap 46060, overlap 46056 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 55 46654 - 46692 + G 76 -9.7 -3.80174 | gap 1, overlap 46655 CGCTGAAAATTTTCC TGATGGCGCTGGCGATCA TCGA TGATC-TCGGCGCTATCG TTATTATCGCACTGT TERM 56 46655 - 46691 + G 71 -11 -2.87622 | gap 1, overlap 46654 GCTGAAAATTTTCCT GATGGCGCTGGCGATCA TCGA TGATC-TCGGCGCTATC GTTATTATCGCACTG nhaA 46188 - 47354 + | Na+/H+ antiporter NhaA TERM 57 47392 - 47371 - f 70 -10.1 -2.97743 | opp_overlap 47376, overlap 47370 CAGTACGAAGGAAAG GGGGAGCGA TGTA TCGCTCCCT TGCGACATTGAACAG TERM 58 47489 - 47503 + G 74 -4.9 -4.82901 | AAGGTTCTGTCGTGG GTGCC GCAGA GGCGC TTTTTCTGACGCCGC TERM 59 48121 - 48133 + G 70 -3.3 -4.82901 | overlap 48122 AAGGCGTTTGGCGCG ACGCA CGA TGCGA TTTTTGTGGCGCCGA SeD_A0043 47416 - 48315 + | transcriptional activator protein NhaR TERM 60 48331 - 48367 + T 85 -12.3 -3.33261 | opp_overlap 48333 48352, overlap 48334 ACGTACCTACCGTAA TACTTCCGGCTGCGG TATTAAC CCGCAGCCGGAATCA TTCTACAAGTTCAGC TERM 61 48365 - 48333 - T 88 -14.9 -3.06492 | opp_overlap 48331 48334, overlap 48352 GTACCTACCGTAATA CTTCCGGCTGCGG TATTAAC CCGCAGCCGGAAT CATTCTACAAGTTCA TERM 62 48334 - 48364 + T 100 -18.4 -2.83747 | opp_overlap 48333 48352, overlap 48331 TACCTACCGTAATAC TTCCGGCTGCGG TATTAAC CCGCAGCCGGAA TCATTCTACAAGTTC SeD_A0044 50409 - 48370 - | glycoside hydrolase, family 31 TERM 63 50122 - 50136 + g 71 -7.8 -4.0641 | opp_overlap 50122 CCGCAGGCGCCAGAA CTCCTG CAA CAGGGG TTTGTGTGGATGGCG TERM 64 52232 - 52246 + r 88 -8.5 -4.83169 | opp_overlap 52232 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT TERM 65 52246 - 52232 - R 100 -8.5 -5.64274 | opp_overlap 52232 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT rpsT 52541 - 52278 - | ribosomal protein S20 SeD_A0048 52716 - 52862 + | hypothetical protein ribF 52870 - 53808 + | riboflavin biosynthesis protein RibF TERM 66 54019 - 54001 - g 89 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCATATGCGAA TERM 67 55071 - 55048 - g 76 -3 -5.03314 | opp_overlap 55052 55068 55070, overlap 55049 55050 55052 TGCATGTCGAAAAAA TGCAGCACAG CTAT CCGTGCTGTT GGCGTCACAAAACGC ileS 53817 - 56687 + | isoleucyl-tRNA synthetase TERM 68 57051 - 57063 + G 75 -6.3 -4.65895 | GGCACGGCTTTGTTG TCGAT ATG ATCGA TTTTTACGTCGGCGA lspA 56687 - 57187 + | signal peptidase II TERM 69 57197 - 57215 + F 79 -7.4 -4.3898 | opp_overlap 57195 57197 GCATAAGCGTAAATA CCGGATGG CGC TTATCCGG TTTTGTAGGCCTGAT TERM 70 57252 - 57295 + F 72 -5.3 -4.64157 | gap 2, opp_overlap 57234 57233 57253, overlap 57253 AGCGCCATCAGGCAA ACGTGGTGCCGGATGGCGGTG AAAA CGCC-TTATCCGGC-CTACGG TTTTATAGTTCTTTG TERM 71 57253 - 57294 + F 70 -8.8 -3.36867 | gap 2, opp_overlap 57234 57233 57253, overlap 57252 GCGCCATCAGGCAAA CGTGGTGCCGGATGGCGGTG AAAA CGCC-TTATCCGGC-CTACG GTTTTATAGTTCTTT fkpB 57342 - 57791 + | FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase ispH 57794 - 58744 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase SeD_A0054 59014 - 58856 - | hypothetical protein TERM 72 58883 - 58917 + g 73 -10.2 -3.4252 | opp_overlap 58891, overlap 58891 CTTTTTGCTATTCAT CTGAAAAACCAGCA CAATCGT TGCTGGTTTTTTGG TTGTAATGCCTACAG TERM 73 58909 - 58891 - G 75 -6 -4.62783 | opp_overlap 58883 58891 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTTGGTTGTAAT TERM 74 58891 - 58909 + g 95 -6 -5.33848 | opp_overlap 58891, overlap 58883 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTTGGTTGTAAT TERM 75 59767 - 59749 - H 72 -3.1 -4.98531 | GCTGGAAAGGAAAAA CGATTGA ACTGA TCGATCG CGGTGAAAGCTACTT TERM 76 60460 - 60476 + G 80 -10.1 -3.95073 | ACCATCAGCGCCAAC CGTTGGC GAA GCCAGCG TTTATCGCTATCCGG TERM 77 60853 - 60903 + G 89 -8.9 -4.62336 | gap 1, overlap 60856 GTAGTATGCGCACTG GCGTCCGGATGCACGATCTCTGCG CTAT CGCCTGGCTGGTGCGTCCGGA-GC TTTTTACCCTGCAAT SeD_A0056 60162 - 61082 + | Non-specific ribonucleoside hydrolase RihC SeD_A0057 61790 - 61104 - | transcriptional regulatory protein CitB TERM 78 61142 - 61173 + g 79 -7.2 -4.40963 | TCTCCGGCCTGCCCA CTTTCCCGTAGCTG ATCT CCGCTTCGAGAAAG TTATTTTTCACGCCT TERM 79 61317 - 61342 + g 78 -6.8 -4.57581 | gap 1 GTTTTCATCAATTCC CCGCAG-TCCG CTATT CGGTTCTGCGG TTTGTTCTTTGGCCT TERM 80 61738 - 61718 - G 75 -6.1 -4.61527 | opp_overlap 61718 AAAACTGGGGAAAAA TCTTGATGG TGT CCACCAGGA TTTCCGCTAGCATCG SeD_A0058 63450 - 61792 - | sensor kinase DpiB TERM 81 62473 - 62488 + g 73 -10.4 -3.37796 | opp_overlap 62473 62472 GCGAAAGCTAATAAC CCAGCC CTGA GGCTGG TTGTCAATAATGACC TERM 82 62539 - 62553 + g 100 -2.1 -6.12458 | TTTCATTTGGTTAAA GGTGA CGATC TCATC TTTTTTGTTTTTTTG TERM 83 63538 - 63516 - R 95 -12.1 -4.27192 | opp_overlap 63511 AAATTTGGATGAAAA TGGGATACG ACATG CGTATCCCA TCCACTATTACATCG SeD_A0059 64847 - 63546 - | oxaloacetate decarboxylase beta chain oadA 66632 - 64860 - | oxaloacetate decarboxylase alpha subunit TERM 84 65273 - 65289 + g 74 -7.2 -4.10453 | opp_overlap 65272, overlap 65252 GCAGTGGCTCAAACG CCGCCG GGTTA TGGCGG TTTTCGAGGAATTTC SeD_A0061 66887 - 66648 - | hypothetical protein TERM 85 66872 - 66846 - G 73 -5 -4.59773 | overlap 66848 66851 CCCCATCCCTAAAAA CATCAGGGTGAA ACC TTCACCCAGTAG TACAGCTTCATTCAT SeD_A0062 68386 - 67046 - | citrate-sodium symporter TERM 86 67828 - 67812 - G 72 -11.5 -3.01708 | overlap 67801 TAAATTTCAGACAGA GGCACGG CGC CCGCGCC GTTACCACCGCCCAT TERM 87 68244 - 68226 - G 70 -5.2 -4.49167 | opp_overlap 68220, overlap 68227 68229 AACATAAGAGCAAAA CCACCGAC TAA GTCAGTCG GTATAGCGTTATAGA TERM 88 68486 - 68500 + H 79 -4.4 -5.12068 | GAATGGTTGTGTTTT TAATTA ATT TAATTA TTTTTATTAACTCTG TERM 89 69090 - 69076 - g 71 -4.2 -4.62471 | overlap 69077 GTCAACCGGGAAAAA CGATCG GCG CCATCG TCATGAACGCCAATC TERM 90 69391 - 69409 + G 73 -5.9 -4.37886 | AACATCTGGCTCCAG CGCTGGG GATTA CCCATCG TTTTGTCGGCAGTGA citC 68643 - 69674 + | [citrate (pro-3S)-lyase] ligase citD 69704 - 69997 + | citrate lyase acyl carrier protein TERM 91 70514 - 70550 + G 76 -12.2 -3.03771 | gap 1 CCGAGCTGTTCTACG CCCGCTGCGCAGTGCTG CATG CGGCGC-GCGTTGCGGG TATTGCCGCCTATGA citE 69994 - 70863 + | citrate (pro-3S)-lyase, beta subunit TERM 92 71586 - 71574 - g 76 -3.3 -5.03314 | overlap 71575 71577 GGGATCCGGAAAAAA TCACC GCG GGTGC GATTCGTCTGTCCAG citF 70874 - 72394 + | citrate lyase, alpha subunit citX 72412 - 72945 + | holo-ACP synthase CitX TERM 93 73261 - 73271 + G 75 -6.8 -4.4267 | opp_overlap 73257, overlap 73268 TGGTGTGAATACCCA TCGC GGG GCGA TTTTCGCTTTTGGCC TERM 94 73268 - 73278 + G 70 -6.8 -4.15565 | overlap 73261 AATACCCATCGCGGG GCGA TTT TCGC TTTTGGCCTGCTGAG citG 72923 - 73831 + | triphosphoribosyl-dephospho-CoA synthase CitG TERM 95 73856 - 73887 + F 83 -8.8 -4.33274 | opp_overlap 73860, overlap 73858 73860 CTTTCATTCTCCCCA GCAATGATTCATCC TGCG GGATGAATCATGTC TTTTACTGATATCGC TERM 96 73858 - 73885 + F 79 -10 -3.76811 | opp_overlap 73860, overlap 73856 73860 TTCATTCTCCCCAGC AATGATTCATCC TGCG GGATGAATCATG TCTTTTACTGATATC TERM 97 73883 - 73860 - f 81 -12.6 -3.14344 | opp_overlap 73860 73858 73856 CATTCTCCCCAGCAA TGATTCATCC TGCG GGATGAATCA TGTCTTTTACTGATA TERM 98 73860 - 73883 + F 85 -12.6 -3.45743 | opp_overlap 73860, overlap 73858 73856 CATTCTCCCCAGCAA TGATTCATCC TGCG GGATGAATCA TGTCTTTTACTGATA dapB 74011 - 74832 + | dihydrodipicolinate reductase TERM 99 74887 - 74905 + T 100 -11.8 -5.55855 | opp_overlap 74887 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTTTGCC TERM 100 74905 - 74887 - T 95 -11.8 -3.99405 | opp_overlap 74887 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTTTGCC SeD_A0070 75057 - 74935 - | hypothetical protein SeD_A0071 75638 - 75483 - | hypothetical protein carA 75696 - 76844 + | carbamoyl-phosphate synthase, small subunit TERM 101 76906 - 76888 - g 74 -2.2 -5.07275 | opp_overlap 76898 76900, overlap 76892 GTACAGATATAAAAA GCATCCTG ATT CTGGGCGC GGGCCCGATTGTTAT carB 76863 - 80090 + | carbamoyl-phosphate synthase, large subunit TERM 102 80144 - 80163 + T 100 -10.8 -5.80817 | opp_overlap 80144 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG TERM 103 80163 - 80144 - T 79 -10.8 -3.63707 | opp_overlap 80144 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG SeD_A0075 81432 - 80836 - | carnitine operon protein CaiE TERM 104 80862 - 80887 + g 91 -9.7 -4.64676 | gap 1, overlap 80882 ATTTTGGCTTCACGT CCG-TCGTGCCT TTC AGGCGCGGTCGG TTTTCTTCGGCCTGC TERM 105 81517 - 81473 - R 73 -10.1 -3.34517 | overlap 81471 81474 ATGGCGGCGTAAACA CCTTATCCGGCCTACGG TTGCGCATGTG CTGTAGGCCGGATAAGC GAAGCGCCATCCGGC TERM 106 81516 - 81474 - R 83 -13.6 -2.60496 | overlap 81473 81471 TGGCGGCGTAAACAC CTTATCCGGCCTACGG TTGCGCATGTG CTGTAGGCCGGATAAG CGAAGCGCCATCCGG SeD_A0076 82327 - 81542 - | carnitinyl-CoA dehydratase TERM 107 82236 - 82218 - G 74 -3.1 -4.84642 | CGGAAATTAAGAAAA GCTTCAC CCATT GCAAAGC TGGTTTTGGCATCAA TERM 108 82349 - 82379 + r 81 -8.2 -4.48743 | opp_overlap 82349, overlap 82350 82351 TCTCCAGATAAATAG TTTCCCGGCGGGAG GGA TTCCTGCCGGAAGG TTTATTTCAGATTTT TERM 109 82350 - 82378 + r 71 -9.5 -3.27619 | opp_overlap 82349, overlap 82349 82351 CTCCAGATAAATAGT TTCCCGGCGGGAG GGA TTCCTGCCGGAAG GTTTATTTCAGATTT TERM 110 82351 - 82377 + r 70 -10.8 -2.55487 | opp_overlap 82349, overlap 82350 82349 TCCAGATAAATAGTT TCCCGGCGGGAG GGA TTCCTGCCGGAA GGTTTATTTCAGATT SeD_A0077 83934 - 82381 - | probable crotonobetaine/carnitine-CoA ligase TERM 111 83661 - 83681 + g 73 -5.3 -4.59773 | opp_overlap 83661 83673 GTAAGCGGGCATTAA TCGGCACCA TAA TGGCACCGA TTTTTGCCAGTCCAA TERM 112 83959 - 83995 + r 100 -13.8 -3.79519 | gap 1, opp_overlap 83954 TCCACTGAAATCAGG CGTGA-GCGCTAACCGG AAAA CCGATTAGCGCATCGCG TTTAATCCTCAACTT SeD_A0078 85268 - 83997 - | crotonobetainyl-CoA:carnitine CoA-transferase TERM 113 85099 - 85144 + g 80 -10.3 -3.78329 | opp_overlap 85098 85097 TCAATCCAGATAACC TCGGCGCCCCATTCGGCGAAC ATCT GTCCGGCGAATGGACCGGCGA TTTCGATTCCTGAAA TERM 114 85296 - 85257 - G 71 -10.6 -3.30243 | opp_overlap 85289 85290, overlap 85260 85262 ATGTAGGCCGGATAA GCACAGCGCCATCCGGCA TGAT TGCCTGATGGCGACGCCC CGCGTCTTATCAGGC TERM 115 85293 - 85260 - G 76 -13.1 -2.8294 | opp_overlap 85289 85290, overlap 85257 85262 TAGGCCGGATAAGCA CAGCGCCATCCGGCA TGAT TGCCTGATGGCGACG CCCCGCGTCTTATCA TERM 116 85291 - 85262 - G 75 -12.1 -2.96274 | opp_overlap 85289 85290, overlap 85260 85257 GGCCGGATAAGCACA GCGCCATCCGGCA TGAT TGCCTGATGGCGA CGCCCCGCGTCTTAT TERM 117 85290 - 85302 + r 70 -9.1 -3.30124 | opp_overlap 85262 85260 85257, overlap 85289 TGATTGCCTGATGGC GACGC CCC GCGTC TTATCAGGCCTACAA caiA 86468 - 85326 - | crotonobetainyl-CoA dehydrogenase caiT 88020 - 86503 - | L-carnitine/gamma-butyrobetaine antiporter TERM 118 86806 - 86792 - G 73 -5.6 -4.60949 | overlap 86794 CAGAGGATAAAGAAA CCCCAC ATG GTGGCG GTGCTGAGCGGCAAG SeD_A0081 88248 - 88433 + | hypothetical protein fixA 88501 - 89271 + | protein FixA fixB 89287 - 90228 + | electron transfer flavoprotein, alpha subunit TERM 119 91509 - 91491 - g 95 -5.2 -5.42259 | overlap 91493 CGATGCGTAAAAAAA TCCTGCGC CAT GCGAAGAA AGTGGGCTTCATCAA fixC 90278 - 91564 + | protein FixC SeD_A0085 91561 - 91848 + | 4Fe-4S ferredoxin, iron-sulfur binding domain protein TERM 120 91886 - 91944 + F 86 -14.4 -2.57931 | opp_overlap 91883 91886, overlap 91895 91934 TTGGCCGGATAAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGGAAACGC CTTATCCGGCCTACA TERM 121 91944 - 91886 - f 78 -12.2 -2.52623 | opp_overlap 91886 91895 91934, overlap 91883 TTGGCCGGATAAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGGAAACGC CTTATCCGGCCTACA TERM 122 92285 - 92297 + G 70 -5.5 -4.41348 | opp_overlap 92266 TATCGGCGTTATCTC CGTGG CGA CCATG TTTGTTTCCACGCCG SeD_A0086 91929 - 93335 + | putative metabolite transport protein YaaU SeD_A0087 93424 - 93654 + | hypothetical protein kefF 93754 - 94284 + | glutathione-regulated potassium-efflux system ancillary protein kefF TERM 123 95238 - 95264 + G 95 -15.2 -3.38812 | opp_overlap 95246, overlap 95236 95245 GGCCGCTGGGCGTAC CGGCAAAACAGC GTC GCTGGTTTGCCG TCTTATTAGGCCAGG TERM 124 95256 - 95246 - g 70 -6.8 -4.11216 | opp_overlap 95245 95238 95236 GGCGTACCGGCAAAA CAGC GTC GCTG GTTTGCCGTCTTATT TERM 125 95367 - 95393 + G 80 -5.1 -4.93296 | gap 1, opp_overlap 95351, overlap 95380 95382 CGCTGACGCTGGCGG TC-GCGCTGTCG ATGG CGGCAACGCCGA TTTTTCTGGTGCTGC SeD_A0089 94277 - 96139 + | glutathione-regulated potassium-efflux system protein KefC SeD_A0090 96261 - 96136 - | hypothetical protein folA 96338 - 96817 + | dihydrofolate reductase TERM 126 96822 - 96860 + T 82 -13.3 -3.02263 | gap 2, opp_overlap 96844 96845, overlap 96837 AACGTCGTTAACGCT GTAGTGCCGGATGGCGGCG AAA CGCC-TTATCCGGC-CTAC TCTTGAGCCAGATGT SeD_A0092 97771 - 96923 - | bis(5'-nucleosyl)-tetraphosphatase apaG 98159 - 97782 - | protein ApaG ksgA 98983 - 98162 - | dimethyladenosine transferase pdxA 99969 - 98980 - | 4-hydroxythreonine-4-phosphate dehydrogenase surA 101255 - 99969 - | chaperone/peptidyl-prolyl cis-trans isomerase SurA TERM 127 100905 - 100862 - G 72 -11.2 -3.14564 | gap 1 TCATCTCTTTACGAA TCTGG-TTACGGTAGGTTGAA TAG TTCAGCCCATCGTAAGCCAGA CGGCTGCGCATCTGA imp 103669 - 101309 - | LPS-assembly protein TERM 128 101951 - 101935 - G 71 -5.9 -4.23674 | TTTGACCAACAGAAA CGTTAAA ACG TTCAACG GCGGCATCATCATAA SeD_A0098 103840 - 103679 - | hypothetical protein TERM 129 103953 - 103979 + G 77 -8.6 -4.10161 | opp_overlap 103946 AAGATAATTGGCGTC GCCGTAGCCC TGATGAT GGGCGGCGGC TTTTGGGGCGTGGTC TERM 130 104070 - 104081 + G 77 -3.6 -5.00616 | opp_overlap 104063 GCCAACCAGCGGGAA CGGC AGGC GCTG TTTTTTGCCACCACC SeD_A0099 103923 - 104735 + | DnaJ domain protein SeD_A0100 105489 - 104830 - | pseudouridine synthase, RluA family TERM 131 105536 - 105524 - R 70 -9.1 -3.44051 | overlap 105527 GCGTGACGACGATAA GACGC AGC GCGTC CAGACGCCAGCCTGC rapA 108407 - 105501 - | RNA polymerase associated protein RapA TERM 132 105848 - 105864 + g 75 -3.6 -4.96848 | overlap 105843 105842 105846 CAAACTCGACCTGGG CGGCCA GATTG TTGCCG TTTTTATCTAACAGC TERM 133 105968 - 105986 + g 85 -6.7 -4.85782 | gap 1, opp_overlap 105953 CCAGTTCGACCAGCA GCG-TGCC GACT GGCAGCGC TTTATTTTTCAACAG TERM 134 106356 - 106373 + g 70 -6.9 -4.15106 | overlap 106346 106349 106370 CAGCAGGCGGTCGCG GCCCTGT TCTA ACTGGGC TTTTAGCGCTTCATG TERM 135 107017 - 107032 + g 74 -7.5 -4.07568 | opp_overlap 107011, overlap 107011 107012 TAGAGCATATCGCGG GCGCG ATCTTC CGCGC TTTTACGCGCGCCCA SeD_A0102 110932 - 108581 - | DNA polymerase II TERM 136 108784 - 108794 + g 81 -6.8 -4.71426 | overlap 108772 ACTGCGTCGGACGAC CCTG CTT CAGG TTTTGTTCATCCGCC SeD_A0103 111689 - 110976 - | putative secreted protein TERM 137 111460 - 111425 - G 89 -9 -4.56597 | overlap 111427 GTCTGGCCTGAAAAA CGGGAGAAGGCGTT TTTCCGCT AACGCCTGCTCCTG CGACAATCGCGCAGT TERM 138 111866 - 111885 + r 71 -3.7 -4.78981 | opp_overlap 111866 TATTTCTCGGATTAA CAAAAAA GCGATA TTTTTTG TTTGTTTTACTTAAT TERM 139 112526 - 112507 - R 81 -12.8 -3.20858 | opp_overlap 112507 GACCAGATTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA TERM 140 112507 - 112526 + r 93 -10.6 -4.58283 | opp_overlap 112507 GACCAGATTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA araD 113234 - 112539 - | L-ribulose-5-phosphate 4-epimerase araA 114877 - 113375 - | L-arabinose isomerase TERM 141 114329 - 114346 + g 74 -7.7 -4.18197 | gap 1 GACTTCACGCATATT GTC-GCCG AAG CGGCAGAC TTTTAGCTGGCGGGT araB 116597 - 114888 - | L-ribulokinase TERM 142 115960 - 115935 - G 71 -7.6 -4.00756 | gap 2, opp_overlap 115935 GAGTTCATCAAAGAA GCTCGCGGGCGG CAGA CCGCCC-C-AGC TTTCATGCCACAGTG SeD_A0108 116937 - 117782 + | arabinose operon regulatory protein SeD_A0109 117901 - 118668 + | inner membrane protein YabI thiQ 119414 - 118707 - | thiamine ABC transporter, ATP-binding protein thiP 121008 - 119398 - | thiamine/thiamine pyrophosphate ABC transporter, permease protein TERM 143 119501 - 119463 - G 76 -12.5 -2.73408 | overlap 119460 ACGTAAAGCAGAGCA GCAG-CAGTATCAGCGCGG TCA CCGCGCCG-TCCTGGCTGC GGTAGGAGCCGATCT TERM 144 119627 - 119608 - G 70 -9.2 -3.67564 | opp_overlap 119595 119614, overlap 119598 119595 AAGTACGCAGGCAAA CGCCAGCG CCTG CGCCAGCG GACGTTTCAGCGCCC thiB 121967 - 120984 - | thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein TERM 145 121611 - 121626 + g 78 -6.8 -4.56597 | opp_overlap 121599 121611 ATAGCCGTAATCGAA CGGCAC AAAT GTGTCG TTTTTCCAGCCGCCG SeD_A0114 122131 - 122012 - | putative lipoprotein sgrR 123803 - 122145 - | sugar transport-related sRNA regulator SgrR TERM 146 122597 - 122609 + g 71 -4.7 -4.56597 | TCAGCGTGAGGGTTT CCAGC CCG GCGGG TTTTTCGCCCGGGCC TERM 147 124080 - 124102 + H 100 -16.4 -5.95539 | opp_overlap 124077 AGCCTAAAATCACCC GCCAGCAGAT AAT ATCTGCTGGC TTTTTTTATTTCGGC TERM 148 124536 - 124524 - g 95 -6.3 -5.43866 | GAAGCGTCAAAAAAA CAGTT GGA AACTG TAGCTGCATCTGACC SeD_A0118 124338 - 124619 + | hypothetical protein TERM 149 124669 - 124620 - T 72 -6.5 -4.25256 | opp_overlap 124625 124626 124628, overlap 124622 124624 124626 124628 124638 CTGGGATTAAAATAA GATAGATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTCGTTTTG GTATCAACGCATAAA TERM 150 124667 - 124622 - T 76 -9.1 -3.72481 | opp_overlap 124625 124626 124628, overlap 124620 124624 124626 124628 124638 GGGATTAAAATAAGA TAGATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTCGTTT TGGTATCAACGCATA TERM 151 124663 - 124624 - T 85 -12.5 -3.43405 | gap 2, opp_overlap 124625 124626 124628, overlap 124622 124620 124626 124628 124638 GATTAAAATAAGATA GATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGT--C GTTTTGGTATCAACG TERM 152 124625 - 124664 + T 100 -15.2 -4.34402 | opp_overlap 124624 124622 124620 124626 124628 124638, overlap 124626 124628 ATTAAAATAAGATAG ATACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTCG TTTTGGTATCAACGC TERM 153 124663 - 124626 - T 100 -18.7 -3.26836 | opp_overlap 124626 124625 124628, overlap 124624 124622 124620 124628 124638 TTAAAATAAGATAGA TACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTC GTTTTGGTATCAACG TERM 154 124626 - 124663 + T 100 -18.7 -3.2032 | opp_overlap 124624 124622 124620 124626 124628 124638, overlap 124625 124628 TTAAAATAAGATAGA TACCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGGTC GTTTTGGTATCAACG TERM 155 124628 - 124661 + T 100 -21.3 -3.16202 | opp_overlap 124624 124626 124622 124620 124628 124638, overlap 124626 124625 AAAATAAGATAGATA CCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGG TCGTTTTGGTATCAA TERM 156 124661 - 124628 - T 100 -21.3 -3.17888 | opp_overlap 124628 124626 124625, overlap 124624 124626 124622 124620 124638 AAAATAAGATAGATA CCAGCAATAAGCGAT GAGT ATCGCTTATTGCTGG TCGTTTTGGTATCAA leuD 125278 - 124673 - | 3-isopropylmalate dehydratase, small subunit leuC 126689 - 125289 - | 3-isopropylmalate dehydratase, large subunit TERM 157 125741 - 125719 - G 81 -12 -3.52192 | TGTAAGCCCATATAA GCCAGCGC TTTTTCG GCGCTGGC GCGCTCAACCGGATC TERM 158 125810 - 125841 + g 74 -11.6 -3.27475 | gap 1, overlap 125809 125813 AAATCACCTGGCCCG GATTCGTGCCCCAGG TCA CCTGCGGCGCGA-TC TCTTCTGCTCGCAGG TERM 159 125813 - 125839 + g 95 -14.4 -3.20322 | overlap 125810 125809 TCACCTGGCCCGGAT TCGTGCCCCAGG TCA CCTGCGGCGCGA TCTCTTCTGCTCGCA TERM 160 126106 - 126118 + g 86 -10.5 -4.12188 | ACGTGCCCGGTGCCG CCGGC GCT GCCGG TTTTACCGATGATCG TERM 161 126208 - 126220 + g 70 -9.1 -3.6502 | ATGGTTTTAGCGCGC CCCTG TTT CAGGG TTTGCGTCGCCAGTA leuB 127783 - 126692 - | 3-isopropylmalate dehydrogenase TERM 162 127704 - 127686 - G 74 -6.6 -4.36262 | opp_overlap 127686, overlap 127687 ATACGCATATCAAAA CGGCTGCG TAC CGCATCCA TAACTTTCAGGGCTT leuA 129354 - 127783 - | 2-isopropylmalate synthase TERM 163 127820 - 127830 + g 70 -5.4 -4.44355 | TCTTTATTTTGAGCT TTGC GTT GCAA TTCTTTTTCAACTTC TERM 164 129397 - 129424 + H 100 -14.2 -3.75629 | opp_overlap 129402, overlap 129402 TTGCGTCAGGCATAA AAAAACCCGCGC AACG GCGCGGGTTTTG TTTGACTTCGAGCTG TERM 165 129402 - 129419 + H 100 -14.1 -4.94058 | opp_overlap 129402, overlap 129397 TCAGGCATAAAAAAA CCCGCGC AACG GCGCGGG TTTTGTTTGACTTCG TERM 166 129419 - 129402 - H 100 -14.1 -5.64274 | opp_overlap 129402 129397 TCAGGCATAAAAAAA CCCGCGC AACG GCGCGGG TTTTGTTTGACTTCG SeD_A0124 130185 - 131129 + | probable HTH-type transcriptional regulator LeuO TERM 167 131136 - 131172 + F 100 -16.2 -4.65838 | opp_overlap 131134 131142 AAGCGATAAAACCGG GCAGAATAAATCAGAA ACAAA TTCTGGTTTATTCTGC TTTTTAGCGTATATA ilvB 131421 - 133175 + | acetolactate synthase, large subunit, biosynthetic type ilvH 133175 - 133669 + | acetolactate synthase isozyme 3 small subunit TERM 168 133793 - 133818 + F 100 -7.6 -5.75945 | CCAACAGGAATTATC GCCCAACC CAATATCACC GGTTGGGC TTTTTTTTGCGAAAT fruR 133953 - 134957 + | fructose repressor mraZ 135563 - 136021 + | mraZ protein mraW 136023 - 136964 + | S-adenosyl-methyltransferase MraW TERM 169 137041 - 137054 + G 70 -6.7 -4.19238 | TGCCTTGCCTGGCGT GATCG GTGA CGATC TTTTGCGGTTCGGGA TERM 170 137285 - 137272 - g 81 -8.1 -4.2803 | opp_overlap 137271 137269 GATCGCAACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCCC ftsL 136961 - 137326 + | cell division protein FtsL ftsI 137342 - 139108 + | peptidoglycan synthetase FtsI TERM 171 139454 - 139418 - g 70 -7.1 -4.14739 | overlap 139420 139448 TGAGCCATCTGAAAA CATGCGTCTGGTGGCGG TGA CCGGCACCAATGGCAAG ACCACCACCACCCAA TERM 172 140222 - 140196 - g 75 -6.4 -4.57073 | opp_overlap 140204 GATGCGCTGGAAAAA GCGTTGCAGGCG GCG CGTCTGCATTGC GCCGGAAAATTGTGG murE 139095 - 140582 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murF 140579 - 141937 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 173 142868 - 142882 + G 71 -5.7 -4.2349 | opp_overlap 142868 142867 TGGGCTCCTTTAAAC TACGC GGACA GCGTA TTTTCCGTATGGCGC mraY 141931 - 143013 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 143016 - 144332 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 174 145113 - 145140 + G 77 -7.8 -4.26076 | gap 1 ATCCGTTCGGCAGCG GTTATCAGCTGAC GCA GTC-GCTGATGGC TTTTGGTCGCGGTGA ftsW 144332 - 145576 + | cell division protein FtsW murG 145573 - 146640 + | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase murC 146759 - 148234 + | UDP-N-acetylmuramate--alanine ligase TERM 175 148572 - 148557 - g 95 -5.4 -5.30348 | gap 1, opp_overlap 148557 AGCGAAGAACAAAAA GCG-CGA ATT TCGGCGC TGGGTTTACCGCTGA SeD_A0139 148227 - 149084 + | D-alanine--D-alanine ligase B ftsQ 149086 - 149916 + | cell division protein FtsQ ftsA 149913 - 151175 + | cell division protein FtsA ftsZ 151236 - 152387 + | cell division protein FtsZ TERM 176 152567 - 152557 - g 82 -5.4 -5.04385 | CACACCGGCAAAAAA GTCA CCC TGAC ATTACGCCCTGCGCC TERM 177 153332 - 153322 - g 70 -6.8 -4.08216 | GCAGTCCTGGCAAAA CAGG AAG CCTG GGAATTTGTGACCTT lpxC 152488 - 153405 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 178 153473 - 153430 - f 70 -10.3 -2.52946 | opp_overlap 153417 153430, overlap 153429 153428 CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTCG TTTTTTTTACTATCC TERM 179 153430 - 153473 + F 100 -10.3 -5.90981 | opp_overlap 153430 153429 153428, overlap 153417 CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTCG TTTTTTTTACTATCC TERM 180 153541 - 153554 + F 74 -5.9 -4.64334 | opp_overlap 153541 GGTTAAATGGAAACA CGGCG CGTT CGCTG TTTTCTTAGCCGATT TERM 181 154211 - 154227 + F 74 -11.5 -2.79175 | overlap 154210 TTTACTTTATTTGTA GCTCCGC GGC GCGGGGC ATTTGAGACTTTATT TERM 182 155184 - 155197 + G 70 -9.5 -3.36515 | overlap 155182 CGTCACCGCCGCGCT GCGCG CGCA CGCGC TGTTTACCCGTGACG TERM 183 155359 - 155349 - g 75 -6.8 -4.50661 | opp_overlap 155350 155352, overlap 155350 155352 AATTCAGAATGAAAA CCAG ACG CTGG CGTCTATTACCTTCC secA 154243 - 156948 + | preprotein translocase, SecA subunit TERM 184 157085 - 157056 - f 85 -13.7 -3.11072 | opp_overlap 157062, overlap 157062 GGCATTGAACACAGA TAAAAAGGCGCAG GCGA CTGCGCCTTTTTT ATGGATGCAACAAGA TERM 185 157079 - 157062 - f 100 -12.7 -5.09685 | opp_overlap 157062, overlap 157056 GAACACAGATAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA TERM 186 157062 - 157079 + F 100 -12.7 -5.28176 | opp_overlap 157062 157056 GAACACAGATAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA SeD_A0146 157100 - 157495 + | mutator MutT protein SeD_A0147 158518 - 157529 - | aldo-keto reductase yakc (NADP+) TERM 187 158313 - 158291 - G 75 -6.2 -4.56597 | overlap 158293 158294 TTTCGTCGCTAAAAA TACCCGATCG CGA CGATCGGCGA TGGCTCTTCCAACTA TERM 188 158311 - 158293 - G 73 -8.8 -3.90048 | overlap 158291 158294 TCGTCGCTAAAAATA CCCGATCG CGA CGATCGGC GATGGCTCTTCCAAC TERM 189 158310 - 158294 - G 75 -12.3 -2.93708 | overlap 158293 158291 CGTCGCTAAAAATAC CCGATCG CGA CGATCGG CGATGGCTCTTCCAA SeD_A0148 158622 - 159545 + | transcriptional regulator, LysR family SeD_A0149 159733 - 159542 - | hypothetical protein TERM 190 159682 - 159656 - G 72 -3.7 -4.77165 | GCGTTTAGAACAAAA TGGGCGGAA GGGGCTAAT TTCCCCCCA GACGACCGGTTTACC SeD_A0150 160486 - 159743 - | hypothetical protein coaE 161106 - 160486 - | dephospho-CoA kinase TERM 191 160714 - 160737 + g 74 -4.5 -4.7254 | overlap 160735 CGTTTCGGGCGTCAC GTCAACCAC CAGTAC GCGGTTGGC TTTTTGATACAGCCT TERM 192 160898 - 160887 - G 74 -2.2 -5.0538 | overlap 160889 CCGGATGCGAAAAAA TACG CTCA CGCA GCGCCCGGCGACGTA TERM 193 161700 - 161669 - g 74 -2.2 -5.03314 | gap 1, opp_overlap 161678, overlap 161671 CTGATTTCGAAAAAA CCGTGCAG-ATTCTG GCG CTGAATCCTGCGCTG AACTTTGTCTGTATT guaC 161332 - 162375 + | guanosine monophosphate reductase TERM 194 162382 - 162405 + T 93 -14.6 -3.32963 | opp_overlap 162378 AGCCTCTAATATTCT GGCTGGCGTA AATG TGCGCCAGCC TTATCCCATCCCGCT SeD_A0154 163608 - 162406 - | protein transport protein HofC SeD_A0155 164983 - 163598 - | protein transport protein HofB SeD_A0156 165430 - 164993 - | prepilin peptidase dependent protein D TERM 195 165642 - 165620 - R 100 -17 -2.91582 | CAGGTGATTTATAGA CCCGACGGCG CAG CGCCATCGGG TGGAGAGGATCAGCA nadC 166545 - 165652 - | nicotinate-nucleotide diphosphorylase SeD_A0158 166633 - 167196 + | N-acetyl-anhydromuramyl-L-alanine amidase SeD_A0159 167193 - 168047 + | AmpE protein TERM 196 168047 - 168070 + T 73 -9.6 -3.4252 | gap 1 TGGGGCATTAGTGTA GCGTT-GTGCC GAT GGCGCTAACGC TTATGCTGCCTACAA SeD_A0160 169089 - 168139 - | alpha-N-arabinofuranosidase 2 TERM 197 168879 - 168908 + g 76 -10.7 -3.71649 | overlap 168883 TGCGGTGCATTTCCG GTGCCCAGATGAG CTGG CTCATCGGGCCAC TTTCCGGTTTGCGCC SeD_A0162 170495 - 169089 - | Na+/galactoside symporter TERM 198 169372 - 169344 - GH 72 -3.8 -4.82667 | gap 1, opp_overlap 169352, overlap 169345 CCAGGAGAGCAAAAA GCC-GACCATCGC CCCG GCAATCGCCAGGC CCAGTTTCAGGAAGA TERM 199 169411 - 169429 + gH 74 -6.7 -4.27584 | opp_overlap 169393 169411, overlap 169393 CCGGAGAAGCTAATA CCGGTAA TGCGT TTGCCGG TTTTCCATTCGCCGT TERM 200 169587 - 169563 - GH 89 -11.3 -4.03815 | opp_overlap 169562 169560, overlap 169558 169577 ATCAAAGAAATAGAA CGCGCAGGAGA AAA TCGCCAGCGCG ATATTGGTCCAGAAA TERM 201 169588 - 169577 - GH 73 -5.8 -4.4648 | opp_overlap 169562 169560, overlap 169563 169558 ACGCGCAGGAGAAAA TCGC CAGC GCGA TATTGGTCCAGAAAA TERM 202 170368 - 170351 - GH 70 -4.7 -4.39386 | overlap 170342 170353 CTGAAAGGAGTAAAA CACCGAC TAAC GCCGGGG CAAGACCAAAAATAT SeD_A0161 170449 - 170574 + | hypothetical protein TERM 203 170641 - 170618 - TR 100 -16 -3.51924 | CTGTGAGGCAGATAA CACCCTCCCC GGAC GGGGAGGGCG GAAAAGTAACGCCAC SeD_A0163 172029 - 170659 - | aromatic amino acid transport protein AroP TERM 204 171013 - 170998 - G 73 -10.4 -3.38272 | GAGCAGCACGCACAA CGCCGT CACG ACGGCG GAAACCAAAATGGAG TERM 205 171816 - 171800 - G 74 -7.9 -4.11484 | opp_overlap 171803, overlap 171803 GCGAAGTGGCTAAAA GAGCCGG CGA CCGGTTC TTCAACCACCATCTC SeD_A0164 172595 - 173359 + | transcriptional regulator, GntR family TERM 206 173482 - 173428 - f 74 -8.1 -3.90112 | gap 1, opp_overlap 173449, overlap 173432 173435 TGCGCGGCAACTAAA CGCAGAACCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGGTTCCA-G ATAACTCAACGTATT TERM 207 173479 - 173432 - f 86 -14.4 -2.70979 | opp_overlap 173449, overlap 173428 173435 CGGCAACTAAACGCA GAACCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGGTTC CAGATAACTCAACGT TERM 208 173476 - 173435 - f 79 -10.3 -3.49878 | opp_overlap 173449, overlap 173432 173428 CAACTAAACGCAGAA CCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGG TTCCAGATAACTCAA TERM 209 175634 - 175610 - g 71 -12.1 -2.50479 | overlap 175609 175606 175614 CTGAACGAAAACTAC CACATGCCGGC CAT GCCAGCAGGTG CCGAGGAAGGTATCC aceE 173519 - 176182 + | pyruvate dehydrogenase (acetyl-transferring), homodimeric type TERM 210 176510 - 176476 - g 91 -11.5 -4.33203 | overlap 176473 GAAGAGAAGAAAGAA GCGGCT-CCGACAGCAG CAC CTGCTG-CGGCAGCGGC GAAAGACGTTCACGT TERM 211 176789 - 176767 - g 70 -9 -3.69323 | overlap 176746 GCAGCACCAGCGAAA GCGGAAGCCG CTC CGGCTGCGGC TGCTCCAGCAGCAGC TERM 212 177599 - 177589 - g 71 -8.2 -3.78775 | opp_overlap 177589 GTCTTCATCATGAAA GCGG TTG CCGC TGCTCTGGAACAGAT aceF 176197 - 178086 + | dihydrolipoyllysine-residue acetyltransferase TERM 213 178112 - 178095 - f 100 -14.1 -4.75174 | opp_overlap 178095 GATGTAAGCGAAAAA GCCGGCC CGAC GGCCGGC TTTTTTTGATAATCT TERM 214 178095 - 178112 + F 100 -14.1 -5.56568 | opp_overlap 178095 GATGTAAGCGAAAAA GCCGGCC CGAC GGCCGGC TTTTTTTGATAATCT TERM 215 179068 - 179055 - g 78 -2.3 -5.16572 | ATGGAAGGCAAAAAA GCCCC GGCT GAAGC GCAGCGTTACGACGC TERM 216 179151 - 179123 - g 73 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCGGGC AAA GCTGGCGTGGAAG TTGACGACCGTGGCT lpdA 178287 - 179711 + | dihydrolipoamide dehydrogenase TERM 217 179765 - 179750 - f 100 -10.4 -5.37043 | opp_overlap 179750 ACCCGATACAAAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG TERM 218 179750 - 179765 + F 100 -10.4 -5.64274 | opp_overlap 179750 ACCCGATACAAAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG SeD_A0168 179798 - 179917 + | hypothetical protein SeD_A0169 180000 - 180284 + | probable secreted protein SeD_A0170 181113 - 180322 - | probable secreted protein TERM 219 180602 - 180621 + g 71 -4.9 -4.67234 | opp_overlap 180615, overlap 180604 180615 ATGTCGCCTGCTTTG GTTGGCC AGTACA GGCCATC TTTTTGGCCTTCGCT TERM 220 180973 - 180986 + g 73 -5.9 -4.42765 | GTCATCGCCCAGTAG CGCGG TAAG CTGCG TTTCGTTTTTTCCGG SeD_A0171 182751 - 181126 - | hypothetical protein TERM 221 181435 - 181462 + g 70 -3.2 -4.68724 | gap 1, overlap 181437 GGATTTATTCAGTGT CTGCTG-CGCCGC CTC GCGACGACTGCTG TTTTGTGTTCCGTCA TERM 222 183764 - 183751 - g 74 -2.3 -5.0538 | overlap 183752 GGCGATGTTAAAAAA CGCCC GTGA AGGCA TTGAGCCGGATCAGC TERM 223 184868 - 184844 - g 71 -5.7 -4.30987 | ACCGTTGAGAAGAAA GGCAAGAAAAA CAT CTTCTCTGGCC GCATCCTGGAAATCG acnB 183140 - 185737 + | aconitate hydratase 2 TERM 224 185765 - 185744 - T 100 -18.7 -3.09273 | opp_overlap 185759 GCGGTGTAACAGAGA CGGGCCCGG ATTT CCGGGCCCG AATGGCGCTTCTTAT SeD_A0173 186241 - 185777 - | hypothetical protein SeD_A0174 186982 - 186659 - | low molecular weight phosphotyrosine protein phosphatase SeD_A0175 187253 - 187615 + | protein YacL TERM 225 187697 - 187713 + F 100 -13.7 -5.24129 | opp_overlap 187693 TCGCCAAACATTCCA GCCGGGA GTA TCCCGGC TTTTTTATAGCAGAA TERM 226 187996 - 187984 - g 78 -6.9 -4.65895 | opp_overlap 187995 TGCCTTATTTAAAAA CGGCG CGG CACCG CTGATTGGCGCTTTT TERM 227 188528 - 188547 + G 71 -4.2 -4.56883 | ATTCTGCTCGGCGTG CTGACAAC GTTC GTTGGCGG TTTCTTTAATATTCG SeD_A0176 187790 - 188803 + | 2-keto-3-deoxygluconate permease TERM 228 189514 - 189498 - g 84 -13.7 -3.08798 | ACTTTTTATGCAAGA CCGGCAG CGG CTGCCGG TGCTGGTGGTGGCCG SeD_A0177 188800 - 190071 + | putative inner membrane protein pdxA 190061 - 191044 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 229 191306 - 191267 - g 100 -15 -4.90869 | overlap 191270 191271 191293 ACCACCAATGAAAAA CAACTGCGATCGCCCGCT GAAA AACGGGCGATCGCACGCG TTGCCGCATCGCTGG TERM 230 191303 - 191270 - g 100 -17.5 -4.54681 | overlap 191267 191271 191293 ACCAATGAAAAACAA CTGCGATCGCCCGCT GAAA AACGGGCGATCGCAC GCGTTGCCGCATCGC TERM 231 191302 - 191271 - g 100 -21 -3.31182 | overlap 191270 191267 191293 CCAATGAAAAACAAC TGCGATCGCCCGCT GAAA AACGGGCGATCGCA CGCGTTGCCGCATCG SeD_A0179 191054 - 191821 + | DeoR-family transcriptional regulator SeD_A0180 192645 - 191851 - | S-adenosylmethionine decarboxylase proenzyme TERM 232 192627 - 192637 + g 72 -2.4 -4.93595 | GATTGTTAAAGCCAT GCAG TTT CAGC TTTTTCAATTTTTAT speE 193526 - 192666 - | spermidine synthase TERM 233 193608 - 193583 - R 81 -12.7 -3.16154 | opp_overlap 193586, overlap 193586 CAACATCATAGCTAA CAATGACCGTG GATG CACGGTCATTA TTTCAGCAATAGGAT TERM 234 193605 - 193586 - R 93 -12.2 -3.71487 | opp_overlap 193586, overlap 193583 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG TERM 235 193586 - 193605 + r 95 -12.2 -3.91716 | opp_overlap 193586 193583 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG SeD_A0182 193980 - 193633 - | hypothetical protein TERM 236 194233 - 194258 + G 70 -6.7 -4.07568 | CTGGGGGTTGCATCA GCGCTGCCGCT GTGG AGCCGCGCCGC TTTTGCCGCCGAACG TERM 237 194653 - 194616 - g 71 -9.7 -3.52906 | opp_overlap 194628, overlap 194614 194624 TCATCCGCACAAACA CGGCAAAACCGGGCGCC AGGT GGCGATGGGCCTTGCCG GACTGGTGCTGATTG TERM 238 195634 - 195622 - g 76 -10.5 -3.70811 | overlap 195616 195615 TCAGAGAACGGCAAA GCGCC AGC GGCGC ACAGAACGGGCTGGA SeD_A0183 194182 - 195792 + | blue copper oxidase CueO TERM 239 195862 - 195843 - T 100 -15 -3.30124 | opp_overlap 195837 195843 CGCCACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG TERM 240 195843 - 195862 + T 100 -15 -3.35358 | opp_overlap 195843, overlap 195837 CGCCACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG gcd 198113 - 195870 - | quinoprotein glucose dehydrogenase TERM 241 196680 - 196694 + g 70 -7.1 -4.07885 | GAACGGCTGAGTTTT GGCGA CGTAA TCGCC TTTTGCCGCGCCCTG TERM 242 196700 - 196718 + g 75 -5.8 -4.56597 | CGTAATCGCCTTTTG CCGCGCCC TGC GGGACCGG TTTTTCCGGGGCGGG TERM 243 198508 - 198488 - g 71 -11.9 -2.53015 | ATACTGTTGAAGTCA TGATCCCCG AAG CGGAGATCA AAGCACGTATTGCCG hpt 198466 - 199002 + | hypoxanthine phosphoribosyltransferase SeD_A0186 199722 - 199060 - | carbonate dehydratase TERM 244 199301 - 199313 + g 73 -5.5 -4.56597 | AGCGCGTCCAGACGT TGCTC TTC GGGCA TTTTTCCCAACAGCG TERM 245 200512 - 200496 - g 76 -5.1 -4.72986 | TACCTCCATGAAAAA TCTGCTT TCA AAGCTGA AATCGGAGACGTTTA SeD_A0187 199831 - 200757 + | ABC transporter, ATP-binding protein TERM 246 200987 - 200999 + G 76 -3.3 -5.00616 | overlap 200978 TAACTCCTACGCGAA TGTCG CGT CGTCA TTTTTTAGCGCCAAG TERM 247 201300 - 201314 + G 71 -6.4 -4.2828 | overlap 201289 CTGACGCCGCTGACC TACCTC GGC GGGGTA TTTTACTCGCTGACG SeD_A0188 200754 - 201524 + | ABC transporter, permease protein SeD_A0189 202723 - 201644 - | putative fimbrial protein precurosr TERM 248 202126 - 202140 + g 71 -4.9 -4.58395 | GGGGAATATTATCTC CGCTG CTGCC CGGCG TTTTTGACAAATAGA TERM 249 202619 - 202644 + g 71 -10.4 -3.17723 | opp_overlap 202614 202615 AAAGAAATTATGCGT GCCGCTGGTG GGTTGA CACCAGCCGC TTCCGTTGCCCATCG SeD_A0190 205278 - 202732 - | outer membrane usher protein FimD TERM 250 202897 - 202866 - G 81 -13 -3.13403 | overlap 202864 202889 GGCCGCTGAGGAAGA CCTGGCCTTTATCG CCGA CGATACTGGCCAGG TTCGCATCCTGCCCA TERM 251 203192 - 203202 + g 71 -8.2 -3.91911 | opp_overlap 203184, overlap 203187 ACCGAAACGCCGCTG GCGC CGG GCGC TTTAATTAAAATCGC TERM 252 204549 - 204577 + g 76 -12.5 -2.8294 | overlap 204548 CGGCGGTGAACTGGC TTTTCAGCGCGAT AAT GTCGCGCTGTAAA TAGTTATAAACGCTG TERM 253 205087 - 205100 + g 87 -8.1 -4.58466 | opp_overlap 205084, overlap 205084 AGTGACGTAATAGGT GCCAG GCAG CTGGC TTTTGTCGTTATCAA SeD_A0191 205988 - 205305 - | chaperone protein FimC TERM 254 206030 - 206009 - R 95 -11.5 -4.68209 | overlap 206011 ACCTCAATAAACAAA GGGGCCAGC CGAC GCTGGCCAC CAGGATCAGTTATAT TERM 255 206028 - 206011 - R 78 -12.7 -2.63182 | overlap 206009 CTCAATAAACAAAGG GGCCAGC CGAC GCTGGCC ACCAGGATCAGTTAT SeD_A0192 206575 - 206036 - | putative fimbrial subunit SeD_A0193 206903 - 206790 - | hypothetical protein TERM 256 206915 - 206901 - G 84 -2.8 -5.40072 | TGTCGGCCAAAAAAA CATGCT GAC ATCATG CAGGATTGGAGCTCA SeD_A0194 206945 - 207385 + | PTS system, IIA component TERM 257 207567 - 207539 - g 74 -10.4 -3.52909 | gap 1, overlap 207537 GCAAACGACGAAAGA TGCCGCC-ATCTG GTCG CAGATTGGCGACA AAATGGTGACCGTAG SeD_A0195 207453 - 208676 + | polysaccharide deacetylase domain protein panD 209063 - 208683 - | aspartate 1-decarboxylase TERM 258 209126 - 209143 + r 74 -5.5 -4.59109 | overlap 209111 CTGCTTTGGAAATTC TCAGGCA GTAT TGCCCGA TTTTTAACCCCTGTC panC 210012 - 209158 - | pantoate--beta-alanine ligase TERM 259 209737 - 209760 + g 74 -6.7 -4.24711 | TTCCTCAACGGCTGG CGCAAAGAC ATAATC GACTTTGCG TTTGTTCAGCTTTTC TERM 260 209906 - 209946 + g 76 -9.8 -3.78329 | overlap 209906 ACCAGCTTCATATGG C-CGTCGTGCAGGTTGCCCA TGG TGGG-AACCAGTGCGACGCG TTTACCTTCCTGACG TERM 261 210114 - 210102 - R 70 -9.1 -3.30124 | overlap 210104 CTGTAGGCCGGATAA GACGC GTC GCGTC GCCATCCGGCACGGT panB 210929 - 210138 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase folK 211529 - 211050 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase SeD_A0200 212839 - 211526 - | poly(A) polymerase TERM 262 211911 - 211926 + g 80 -4.6 -5.02476 | overlap 211912 TCGTAATAGGCAAGG CCGCTC TCCT GAGCGA TTTTTTGCGCCATCT TERM 263 212678 - 212693 + g 73 -5.4 -4.56597 | TGCGTTGGTAGTCAC GTCGAA ATCC TTCGGC TTTTTGCCGAGCAGG SeD_A0201 214026 - 213085 - | glutamyl-Q tRNA TERM 264 214020 - 214003 - G 95 -12.7 -4.21772 | opp_overlap 214003 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT TERM 265 214003 - 214020 + g 76 -12.7 -2.80935 | opp_overlap 214003 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT dksA 214505 - 214050 - | RNA polymerase-binding protein DksA sfsA 215386 - 214682 - | sugar fermentation stimulation protein TERM 266 214870 - 214827 - G 71 -4.4 -4.56597 | gap 1, overlap 214858 CGTGCGGGGGAAAAA CGTGTAATGGCGGAGTGCAGC ACC GC-GAACACCACCACTGCGCG ATGACCTGCCGCCGC TERM 267 215096 - 215113 + g 83 -9.9 -4.09321 | overlap 215081 215080 CGCCAGCGCCGGCAG GCGATTC TCCT GAATCGC TTCTTTCGTTAGCTG SeD_A0204 215933 - 215403 - | 2'-5' RNA ligase TERM 268 216071 - 216061 - g 71 -4.6 -4.61231 | opp_overlap 216061 216061 TGACAGCCCTAAAAA CCGC GCC GCAG GTTTTGTTGTCCGCG TERM 269 216619 - 216600 - g 72 -11.4 -3.14132 | opp_overlap 216610 216612 TTGCGTTTTGATGAA GCCGTCGC GATG GCGACAGC GGAACTGTTGCGCAA hrpB 215961 - 218435 + | ATP-dependent helicase HrpB TERM 270 218650 - 218670 + G 70 -9.7 -3.44527 | ACAAAAGGTGAGCCG TCGTCGGCA GCA TGACGACGA TTATGATGATGACTA TERM 271 219747 - 219779 + G 71 -8.2 -3.90744 | overlap 219762 219766 219770 ATGACATGCTGAGCG CGCGTCCGCTTGGC GTACA GCCGCGCGGCGGCG TTATTTCACCGCAGC TERM 272 220086 - 220108 + G 79 -12.7 -2.87881 | opp_overlap 220101, overlap 220073 CGCGCCGTTCCATCG GGTCGCTGG CGAAA CCGGCGACC TATCTGACCGCGTTA TERM 273 220703 - 220675 - g 77 -8.2 -4.17309 | gap 1, overlap 220669 220676 GACGACAAACAACAA TGTCGATACCTGG TTTG CC-GGTATCGACG GCAGCCAGGTGACTA TERM 274 220702 - 220676 - g 76 -11.7 -3.09301 | gap 1, overlap 220669 220675 ACGACAAACAACAAT GTCGATACCTGG TTTG CC-GGTATCGAC GGCAGCCAGGTGACT mrcB 218576 - 221098 + | penicillin-binding protein 1B SeD_A0207 221377 - 221237 - | hypothetical protein TERM 275 221636 - 221626 - g 74 -2.4 -5.09895 | opp_overlap 221626 CACCTATCGAAAAAA CGCC ACA GTCG GTTTCGGTGGTCACT TERM 276 222259 - 222239 - g 70 -9.7 -3.34398 | overlap 222237 CTGGCTGCCGAAAGA GGGAACGGT TGA ACCGTTACC GAATGGTAAACGCTT fhuA 221469 - 223580 + | ferrichrome-iron receptor TERM 277 223589 - 223610 + F 100 -13.7 -4.1466 | overlap 223590 TTTCTAATTTCTTTT TGGGCACGG CTTG CCGTGCCCG TTTTACAAGTTGGCT TERM 278 223590 - 223609 + F 93 -15 -3.08314 | overlap 223589 TTCTAATTTCTTTTT GGGCACGG CTTG CCGTGCCC GTTTTACAAGTTGGC fhuC 223629 - 224426 + | ferrichrome ABC transporter, ATP-binding protein TERM 279 224780 - 224762 - g 82 -11.6 -3.85698 | opp_overlap 224767 224768 224771 CCCTCGCCGGAGAAA CTGGCGCG GAT CGCGCCGG GGCGCGGGTTCGATT TERM 280 225139 - 225119 - g 71 -8.3 -3.91897 | opp_overlap 225122, overlap 225122 CTGGCGATGTATAAA GAAGCGGAT GTA ATCTGCTTC GATCACGGGAATAAC SeD_A0210 224426 - 225316 + | ferrichrome-binding periplasmic protein TERM 281 225725 - 225778 + G 83 -15.2 -2.74523 | overlap 225723 TTTGGGCGATTCCCG GCGCGCTGACCACGCAGTTTGCCG CCCTGA CGGGAGCCTGCATCGTCGGCGCGC TGGTGTTCGGCGTGG TERM 282 226225 - 226243 + G 77 -7.3 -4.33785 | overlap 226210 GCGCGCCTGATGCTG GCGCCGC TCATT GGGGCGC TTATTTTGTGGCTAT TERM 283 226404 - 226426 + G 71 -7.6 -3.965 | opp_overlap 226392, overlap 226405 226411 226414 GAACGCCAGCGATCG TGTGGCGGCG GAA CGTCGGCACG TTCTTGCTTTTGCCG TERM 284 226447 - 226487 + G 81 -8.2 -4.25104 | gap 1, overlap 226450 226451 GCTTTTGCCGTTGCC GGTGGCGCGCTCC-TGCTG CTGG CAACATGGGGCGCGCTCTC TTTTGGTCGCGACGC TERM 285 226451 - 226483 + G 80 -12 -3.44672 | gap 1, overlap 226450 226447 TTGCCGTTGCCGGTG GCGCGCTCC-TGCTG CTGG CAACATGGGGCGCGC TCTCTTTTGGTCGCG TERM 286 226790 - 226805 + G 86 -11.8 -3.85698 | overlap 226791 TGATTATTATGTTAG CCGCCG GGCG CGGCGG TTTCTCGCCGCAACG SeD_A0211 225313 - 227370 + | ferrichrome transport system permease protein FhuB SeD_A0212 227671 - 227558 - | hypothetical protein TERM 287 227728 - 227744 + r 72 -8.7 -3.7829 | opp_overlap 227728 CTTTTTAAATATTAA GATGTGG ATG CCGCATC TTTAATGCATCTCGT SeD_A0213 227899 - 227774 - | hypothetical protein TERM 288 227831 - 227799 - G 95 -12.3 -4.4648 | opp_overlap 227805 ATTTTCATTATAAAA CTTCGATAATAAAAT ATT ATTTTTTTATCGAAG TAATAAAAAACAACT TERM 289 227805 - 227817 + g 91 -3.5 -5.61596 | opp_overlap 227799 ATTATAAAACTTCGA TAATA AAA TATTA TTTTTTTATCGAAGT SeD_A0214 228310 - 228870 + | putative fimbrial subunit TERM 290 228909 - 228877 - f 100 -15.7 -3.75629 | opp_overlap 228879, overlap 228879 TATCTGTAAGTGAAA TATCATCCTGCGGCA GTC TGCCGCAGGATAATG CTTAAAGTAAAAAAA TERM 291 228879 - 228907 + F 90 -16.1 -2.73364 | opp_overlap 228879 228877 TCTGTAAGTGAAATA TCATCCTGCGGCA GTC TGCCGCAGGATAA TGCTTAAAGTAAAAA TERM 292 228907 - 228879 - f 100 -18.3 -3.46068 | opp_overlap 228879, overlap 228877 TCTGTAAGTGAAATA TCATCCTGCGGCA GTC TGCCGCAGGATAA TGCTTAAAGTAAAAA TERM 293 231286 - 231257 - g 80 -4.3 -5.03314 | gap 1, opp_overlap 231272 231274 CTCAGCGGTAAAAAA GCCATGGC-CAG TATCCGC CTGCGCGATGGC GGCACGCCGCCCTTC SeD_A0215 228956 - 231613 + | fimbrial usher protein SeD_A0216 231631 - 232383 + | chaperone protein PapD SeD_A0217 232402 - 232914 + | putative minor fimbrial subunit SeD_A0218 232911 - 233387 + | fimbrial subunit SeD_A0219 233387 - 233917 + | minor fimbrial subunit StfG SeD_A0220 233914 - 234756 + | hypothetical protein TERM 294 234838 - 234811 - T 100 -9.9 -5.96521 | gap 2, opp_overlap 234810 234807 ATGAACCAAAAAAAA GCCGGGT--GGCG GCTT CGCCTTACCCGGC CTACGTTGTTTTTGG hemL 236144 - 234864 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 295 235013 - 235003 - G 70 -6.8 -4.1711 | overlap 234974 235011 ATCAGGTGGAAGAAA CGCT TAA AGCG TTCCACGTCGCACGC TERM 296 236513 - 236538 + G 76 -3.3 -4.98531 | gap 1, opp_overlap 236501 236499, overlap 236502 236521 236522 ACATGCGCATTGGCG CGC-TGGTTC AGGTCGC GGACCATGCG TTTTTGCTTTGGCCG TERM 297 236549 - 236559 + G 77 -8.2 -4.13654 | ATGCGTTTTTGCTTT GGCC GCT GGCC TTTATCCTTTCGGCG SeD_A0223 236314 - 237735 + | chloride transporter, chloride channel family TERM 298 238023 - 238009 - g 76 -5.6 -4.68994 | opp_overlap 238009 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGACCCGATG yadR 237817 - 238161 + | iron-sulfur cluster assembly accessory protein YadR SeD_A0225 238885 - 238262 - | inner membrane protein YadS SeD_A0226 239710 - 238922 - | cobalamin periplasmic binding protein TERM 299 239526 - 239539 + g 70 -6.7 -4.18465 | AGATTCATTCCCTGC CAGGT AGAG ACCTG TTCTATTTTTTGCGC mtnN 240413 - 239715 - | MTA/SAH nucleosidase TERM 300 240667 - 240652 - g 78 -2.4 -5.14563 | overlap 240653 GTTTGCAGCAAAAAA CGCAGG TTTT CCCGCT GGAGCGCAATGCCGC TERM 301 241599 - 241618 + G 70 -7.1 -4.08945 | overlap 241577 241614 ACCTTCAATCAGGCG CTGCTGG AAGATG CCAGCGG TTTTAGCCGCCTGCT dgt 240456 - 242015 + | deoxyguanosinetriphosphate triphosphohydrolase degP 242145 - 243572 + | protease Do SeD_A0230 243725 - 244882 + | carbohydrate diacid regulator SeD_A0231 247971 - 244939 - | viral enhancin protein SeD_A0232 248543 - 248157 - | protein YaeH TERM 302 248890 - 248910 + G 89 -3.1 -5.47218 | TATACGGCCTGGCAA GCGCGCTGG TAT TTGGCCCGC TTTTTTTCCCTGGCG TERM 303 249117 - 249130 + G 76 -9.5 -3.78529 | overlap 249115 249129 TCTTACGCCAGTATT GGCGC GCTG GCGCC TGTTTTACTGGTTAT SeD_A0233 248790 - 250091 + | major facilitator family transporter TERM 304 250113 - 250098 - T 93 -11.8 -3.76125 | opp_overlap 250097 250096 TCACCGTAATGCAAA GGGGGC TGTC GCCCCC GCTTTTCACTCGCTT dapD 250951 - 250127 - | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase glnD 253653 - 250981 - | protein-P-II uridylyltransferase TERM 305 252975 - 252992 + g 74 -6.9 -4.3467 | ATGTATGGATATCGC GCAGGCC GCCG GGGCTGC TTTTAATATCCGGCT TERM 306 253284 - 253268 - G 74 -6.5 -4.30987 | opp_overlap 253268 ACGTCCCATAATAAA GTCAGCA GCT CGCCGAC CTTTTGCGCCTGTTC TERM 307 253703 - 253673 - R 100 -16.3 -4.7497 | gap 1, opp_overlap 253668 253667 253683 GCCACCCATTAAAAA GCCGGATAATGGCG TGAA CGCC-TTATCCGGC CTACGTATTTACTCT map 254685 - 253891 - | methionine aminopeptidase, type I TERM 308 254635 - 254645 + g 78 -2.4 -5.15381 | overlap 254632 GGCTGCCAGACGGCC CGCG ACG CGCA TTTTTTCGATGTCTT rpsB 255136 - 255861 + | ribosomal protein S2 TERM 309 255854 - 255842 - f 73 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC CGAGTAATAAGGCTT TERM 310 256035 - 256055 + F 100 -11.1 -4.89729 | overlap 256033 TATCACGTTTGGTTA GGGGGCC TGTATAT GGCCCCC TTTTTCACTTTTATA TERM 311 256291 - 256275 - g 86 -6.5 -5.03747 | AAAGCGGCGAAAAAA GCAGGCA ACG TGGCTGC TGACGGCGTAATCAA TERM 312 256330 - 256315 - g 74 -4.6 -4.72729 | opp_overlap 256315 256316, overlap 256316 TAATCAAAACCAAAA TCGACG GCAA CGTCGC TTTCATTCTGGAAGT TERM 313 256520 - 256542 + G 71 -9.8 -3.47751 | overlap 256529 CATCAACATTCGTCG CGTCGCTTCC CTG GAAGGCGACG TTCTGGGTTCTTACC tsf 256119 - 256970 + | translation elongation factor Ts TERM 314 256980 - 257001 + F 100 -13.7 -4.61633 | TCCTGATTTTCCTGA GGAGCCGCC TGAG GGCGGCTTC TTTTTGCGCCTCTCT TERM 315 257050 - 257024 - f 76 -8.1 -4.07568 | gap 2, overlap 257027 GCCTCTCTTGTAAAA TCAGC-C-GACGC CTG GCGTCTGCGCTGA AATGCGACGTACAAT TERM 316 257045 - 257027 - f 73 -10.2 -3.08032 | overlap 257024 TCTCTTGTAAAATCA GCCGACGC CTG GCGTCTGC GCTGAAATGCGACGT pyrH 257115 - 257840 + | UMP kinase frr 257987 - 258544 + | ribosome releasing factor TERM 317 258544 - 258524 - f 76 -8.3 -4.14627 | opp_overlap 258524 258525 258527, overlap 258525 258527 TTGGCAGATAAAGAA GCAGAACTG ATG CAGTTCTGA TTGATCTGTACGCAG TERM 318 258543 - 258525 - f 78 -11.8 -3.08294 | opp_overlap 258525 258524 258527, overlap 258524 258527 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 319 258525 - 258543 + F 76 -11.8 -2.58999 | opp_overlap 258524 258525 258527, overlap 258524 258527 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 320 258602 - 258651 + G 100 -16.5 -5.16151 | opp_overlap 258607 258608, overlap 258603 GCGGATGAGTGGTGT ACAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTGC TTTTTATTCCGTTTC TERM 321 258603 - 258650 + G 100 -20 -3.68064 | opp_overlap 258607 258608, overlap 258602 CGGATGAGTGGTGTA CAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTG CTTTTTATTCCGTTT TERM 322 258646 - 258607 - g 90 -12.8 -3.86346 | opp_overlap 258603 258602, overlap 258608 TGAGTGGTGTACAAA GCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGT TTTGCTTTTTATTCC TERM 323 258645 - 258608 - g 93 -16.3 -2.91593 | opp_overlap 258603 258602, overlap 258607 GAGTGGTGTACAAAG CGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCG TTTTGCTTTTTATTC dxr 258598 - 259881 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 324 259949 - 259960 + F 80 -5.8 -4.95854 | overlap 259941 ATATAGTCTGCGCCA CCTG ATCG CAGG TTTTTGGCTTTTTTC TERM 325 259986 - 260003 + F 100 -8.4 -5.28176 | TTTTCGGTCAGGTTA GCCGTG GTTTTA CACGGC TTTTTTGTGGATACA uppS 260194 - 260952 + | di-trans,poly-cis-decaprenylcistransferase cdsA1 260965 - 261822 + | phosphatidate cytidylyltransferase TERM 326 262123 - 262111 - g 74 -3.3 -4.89477 | opp_overlap 262120 CCTTCAATAACAAAA CGGTG GGC CAGCG CGCCGCAATTATTGC rseP 261834 - 263186 + | RIP metalloprotease RseP TERM 327 264881 - 264896 + G 80 -9 -4.12188 | opp_overlap 264880 264881 264893 AGTCGATGGGACAAT CTGCTG ATAC CAGCAG TTTTGCCGCTGATGA yaeT 263218 - 265632 + | outer membrane protein assembly complex, YaeT protein TERM 328 265969 - 265957 - g 77 -7.7 -4.27584 | ATCTGCAATCTAAAA TGCAG CGT CTGCA ATCCATGAAAGCAGG TERM 329 266217 - 266189 - g 78 -11.8 -3.28924 | overlap 266174 266176 CACCGTTGCTTACAA CAGCAGCGATGT GAAAG ACATCACCGCTG ACGTACTGAAACAGG skp 265755 - 266240 + | chaperone protein Skp TERM 330 266322 - 266297 - g 81 -13.3 -2.97245 | opp_overlap 266295, overlap 266292 GGATGCAGAATTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 266244 - 267269 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 331 267298 - 267334 + F 79 -9.4 -4.02005 | gap 1, overlap 267299 AGTTGCCATTCTTTT C-CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCGTG TTATTATTGCCTTTT TERM 332 267299 - 267332 + F 90 -13.1 -3.57992 | overlap 267298 GTTGCCATTCTTTTC CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCG TGTTATTATTGCCTT fabZ 267375 - 267830 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 333 267894 - 267917 + G 72 -3.8 -4.79752 | overlap 267898 GACGGCGCTGTAATT GGCGCTAATG CCCA CATTGGTCCC TTTTGTATTGTTGGG TERM 334 268259 - 268247 - g 70 -9.1 -3.61715 | TATCCTCGCCAACAA CGCCA CGC TGGCG GGGCACGTATCAGTC lpxA 267834 - 268622 + | acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase TERM 335 268712 - 268732 + G 71 -8.2 -3.89614 | opp_overlap 268712 268713 268726 ATTCGTGCGCTGAAA GCGCGCGT ACCCA ACGCCCGC TTTGTGGGCGTTGCG TERM 336 269168 - 269158 - g 72 -2.4 -4.84359 | opp_overlap 269163 269164, overlap 269160 GGACCCGGATAAAAA TGCG GCG CGCG ACGTGCTGGGTATCC TERM 337 269661 - 269630 - g 71 -4.4 -4.66833 | gap 1, overlap 269631 TGCGAACCGCAAAAA CTCGCC-GAAGCG CTGTTGC CGCTACTGGCGAA CGGTAAAACCAGCCA lpxB 268622 - 269770 + | lipid-A-disaccharide synthase rnhB 269767 - 270363 + | ribonuclease HII TERM 338 272135 - 272123 - g 100 -10.5 -4.82901 | overlap 272108 272125 GCGGCGCGAGAAAAA CGGCG AGC CGCCG CTGGATATCGCCGCC TERM 339 272364 - 272336 - g 85 -12.6 -3.50572 | gap 1, opp_overlap 272333 272331 AGGGATGGTAGATAA CTTCATCGACCGT AAGC ACGGTCG-TGAAG AACTCTCTTACCCGG dnaE 270387 - 273869 + | DNA polymerase III, alpha subunit TERM 340 274035 - 274021 - g 76 -2.8 -5.00616 | overlap 274033 GCCTGCGCGAAAAAA GCGT AGAACTG ACGC GCAAAATCTTCGCCG accA 273882 - 274841 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 341 274864 - 274884 + F 100 -16.9 -5.75342 | CCTCATTTTTCCCAG GAGGCCGGA TAA TCCGGCCTC TTTTTTTTGGACGAG TERM 342 275056 - 275037 - g 100 -10 -5.0538 | gap 1 TGGGATTGCAAAAAA CACTGGCGC TCA GCGCC-GTG GCGGCAGGAATCATG TERM 343 275149 - 275134 - g 71 -10.4 -3.25015 | GCCAATGACCATCAA CGCCAG CGAT CTGGCG GCGAAAGAGAAAGCG SeD_A0255 275021 - 276784 + | endochitinase TERM 344 276820 - 276794 - f 90 -10.8 -4.34263 | opp_overlap 276794 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 345 276794 - 276820 + F 100 -15.2 -3.79849 | opp_overlap 276794 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 346 277003 - 277025 + G 71 -4.9 -4.66609 | gap 1, opp_overlap 277003 277007, overlap 277007 GAAGTTTATTGAACA TAAC-CCGCG CATC TGCGGCGTTA TTTTTGACTGGGATG TERM 347 277347 - 277357 + G 78 -6.8 -4.58242 | opp_overlap 277341 277343 ATCAGAAAAGCCCGC CAGG CTG CCTG TTTTATGACTTTTTT TERM 348 278581 - 278595 + G 77 -4.2 -4.84761 | overlap 278570 GTTGCCGGATCTGTA TGCGGA AGA TCCGGA TTTTTATCGCAATAT TERM 349 278866 - 278880 + G 79 -7.8 -4.49311 | opp_overlap 278865 GATTACGCAACAGAG TCGGGC CGT GCTCGA TTTTCTGCTGATGCT ldcC 276860 - 279001 + | lysine decarboxylase, constitutive SeD_A0257 279057 - 279446 + | glyoxylase family protein TERM 350 280681 - 280650 - g 77 -3.7 -5.04868 | gap 2, opp_overlap 280676 280678, overlap 280652 GTAAATTAAAGAAAA TCTGGCAGGAGCAGG GGAT CCCGC-CCTGGC-GA CGAGACACCACGCCG tilS 279509 - 280801 + | tRNA(Ile)-lysidine synthase TERM 351 280811 - 280854 + T 81 -13.2 -2.71011 | opp_overlap 280843 280853 GCCTGATGGCGCTGC GCTTATCAGGCCTACGTATC GCAT GGAACGTAGGCCGGATAAGG TGCTTGCACCACCAT rof 281079 - 280885 - | rof protein SeD_A0260 281332 - 281132 - | hypothetical protein TERM 352 281168 - 281183 + g 86 -10.4 -4.18018 | CACCAGTAAGTTCGC GGCAGC ATAA GCTGCC TTTTCCCTGACCGAC TERM 353 281825 - 281812 - g 81 -8.1 -4.24342 | CGCCGTATTAAGAAA GCCTG TACT CAGGC GAGCGACGTCGCGCT SeD_A0261 281530 - 282075 + | hypothetical protein SeD_A0262 282072 - 282494 + | peptidyl-tRNA hydrolase domain protein SeD_A0263 282526 - 283227 + | copper homeostasis protein CutF TERM 354 283233 - 283253 + T 100 -16.9 -3.74077 | opp_overlap 283233 CACTCACTAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG TERM 355 283253 - 283233 - T 100 -16.9 -4.72497 | opp_overlap 283233 CACTCACTAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG proS 285019 - 283301 - | prolyl-tRNA synthetase TERM 356 283338 - 283357 + g 71 -4.2 -4.58395 | opp_overlap 283330 283338 283354 AGATAATCAACGATA TCGCCGGT TTTA ATCAGCGA TTTTTCACCGCTACG TERM 357 284276 - 284292 + g 74 -10.8 -3.53444 | overlap 284280 AGTCATTTCCTGCGT CGCCGC TGCGC GCGGCG TTTGCGGCGCGATAG TERM 358 285067 - 285049 - R 83 -13.2 -3.13343 | AGTTGAACGATCGAA CAGGCTCA ATG TGAGCCTG ATACAAAAAAAGTGA SeD_A0265 285870 - 285130 - | hypothetical protein TERM 359 285608 - 285576 - GR 93 -9.8 -4.56775 | gap 1, overlap 285602 AGCGCGTGGCAAAAA CGCCCATTC-TGGCG TTAC CGCCAAGACGGGGCG GACGAACTGTCGGCC TERM 360 285684 - 285709 + gr 70 -9 -3.29829 | opp_overlap 285681 AATGGCTGAAAGCTT CCAGGCCG CGAACGGCAT CGGCCTGG TTGTAAGGCGCTATC rcsF 286238 - 285834 - | exopolysaccharide synthesis regulator RcsF TERM 361 286322 - 286299 - R 88 -14.6 -3.01125 | opp_overlap 286297, overlap 286296 286302 AGCTTGCATAAATGA CAAGACGGGC AATA GCCCGTCCTG AATAATATTACAGAT TERM 362 286319 - 286302 - R 88 -12.7 -3.64915 | opp_overlap 286297, overlap 286299 286296 TTGCATAAATGACAA GACGGGC AATA GCCCGTC CTGAATAATATTACA metQ 287172 - 286357 - | D-methionine ABC transporter, periplasmic D-methionine-binding lipoprotein metI 287864 - 287211 - | D-methionine ABC transporter, permease protein TERM 363 287570 - 287560 - G 83 -8.2 -4.38154 | overlap 287532 ATACGGGCGATAAAA GGCG CGG CGCC GACGGTCAGCGGTAC metN 288888 - 287857 - | D-methionine ABC transporter, ATP-binding protein TERM 364 288178 - 288188 + g 77 -8.2 -4.13767 | CTGAATAAACTTCTG CGCC AGC GGCG TTTTAGGGTGCGAGA SeD_A0270 289078 - 289644 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 365 289802 - 289788 - f 76 -4.2 -5.0916 | opp_overlap 289788, overlap 289789 289796 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 366 289834 - 289822 - f 71 -7.7 -4.00532 | overlap 289832 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACGGTG SeD_A0275 291898 - 292014 + | hypothetical protein TERM 367 292013 - 291989 - f 71 -8 -3.93061 | gap 1, opp_overlap 291989 291996, overlap 291993 291999 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 368 292567 - 292555 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 369 292619 - 292601 - f 70 -8.8 -3.35798 | overlap 292604 ACCGTGTACGTACAA GCAGTGGG AGC CCCACCAC TAAGCCAGTGGTGAA TERM 370 295774 - 295749 - f 83 -13.3 -3.18264 | opp_overlap 295751, overlap 295751 TCCGCCACTTATTAA GAGCCCTGAGC ATTA GCTCAGGGCTT TTTCTTTGCATATCA TERM 371 295772 - 295751 - f 100 -15.9 -3.1552 | opp_overlap 295751, overlap 295749 CGCCACTTATTAAGA GCCCTGAGC ATTA GCTCAGGGC TTTTTCTTTGCATAT TERM 372 295751 - 295772 + F 100 -15.9 -5.31519 | opp_overlap 295749 295751 CGCCACTTATTAAGA GCCCTGAGC ATTA GCTCAGGGC TTTTTCTTTGCATAT dkgB 295905 - 296708 + | 2,5-didehydrogluconate reductase B TERM 373 296743 - 296760 + T 87 -11.3 -3.97043 | TTTACCCCTCTTTCA CAGCTCC TGCG GGAGCTG TTCTTATATATTCGC SeD_A0279 297643 - 296729 - | LysR substrate binding domain protein SeD_A0280 297748 - 298923 + | inner membrane transport protein YdhP TERM 374 299025 - 299006 - f 77 -9.3 -4.00486 | opp_overlap 299009 CCTATAACAGAAGAA CCAGTCC GGTTGA GGACTGG TTGACGTTACAGAGG SeD_A0281 299055 - 299855 + | protein YafD TERM 375 299866 - 299885 + F 75 -11.4 -3.07043 | opp_overlap 299844 299833, overlap 299876 299877 AATAAAGGTGCGTCA GGTCTGCC GTGG GGCAGGCC TCTTCGGGTGCTGCC SeD_A0282 299933 - 300703 + | methyltransferase, UbiE/COQ5 family TERM 376 300707 - 300741 + T 84 -8.6 -4.72272 | opp_overlap 300714, overlap 300708 300709 300714 AAAGCGGTATAGCAA TTTAAAAGGCGCCG GGGGAAG CGGCGCCTTTTGGC TTTTTCGTCGGACAA TERM 377 300708 - 300740 + T 82 -12.1 -3.43042 | opp_overlap 300714, overlap 300707 300709 300714 AAGCGGTATAGCAAT TTAAAAGGCGCCG GGGGAAG CGGCGCCTTTTGG CTTTTTCGTCGGACA TERM 378 300709 - 300739 + T 81 -13.4 -2.65504 | opp_overlap 300714, overlap 300708 300707 300714 AGCGGTATAGCAATT TAAAAGGCGCCG GGGGAAG CGGCGCCTTTTG GCTTTTTCGTCGGAC TERM 379 300714 - 300734 + T 95 -11.1 -4.49644 | opp_overlap 300714, overlap 300709 300708 300707 TATAGCAATTTAAAA GGCGCCG GGGGAAG CGGCGCC TTTTGGCTTTTTCGT TERM 380 300734 - 300714 - T 91 -11.1 -4.31085 | opp_overlap 300714 300709 300708 300707 TATAGCAATTTAAAA GGCGCCG GGGGAAG CGGCGCC TTTTGGCTTTTTCGT mltD 301979 - 300759 - | membrane-bound lytic murein transglycosylase D TERM 381 301336 - 301387 + g 71 -7.2 -3.9318 | gap 1, overlap 301332 301341 301362 301385 TTTAAACGAACTCGT GCCAGCGCT-CGGCTTTCATCTGTT GTT GGCAGACGTACGCCGTAGCGTTTGC TGTTTTTGAGAATTT TERM 382 301341 - 301382 + g 70 -6.5 -4.13748 | gap 1, overlap 301332 301336 301362 ACGAACTCGTGCCAG CGCT-CGGCTTTCATCTGTT GTT GGCAGACGTACGCCGTAGCG TTTGCTGTTTTTGAG TERM 383 301362 - 301389 + g 71 -4.2 -4.64657 | gap 1, overlap 301341 301336 301385 GCTTTCATCTGTTGT TGGCAGACG-TAC GCC GTAGCGTTTGCTG TTTTTGAGAATTTCA gloB 302953 - 302198 - | hydroxyacylglutathione hydrolase SeD_A0285 302988 - 303710 + | putative methyltransferase rnhA 304174 - 303707 - | ribonuclease HI dnaQ 304229 - 304969 + | DNA polymerase III, epsilon subunit TERM 384 305063 - 305044 - T 71 -3.4 -4.90296 | overlap 305046 AAAAGGTGAGAAAAA GCGTTGAC GGGC GACACCGC AAACCGTAATATTCG TERM 385 305251 - 305227 - T 100 -8.6 -5.95166 | opp_overlap 305227 GTGAAGTAAAAAAAA CCGTATCACT GTAAA AGGGATACGG TTTTTTTTCGTCTTC TERM 386 305227 - 305251 + T 100 -8.6 -5.94597 | opp_overlap 305227 GTGAAGTAAAAAAAA CCGTATCACT GTAAA AGGGATACGG TTTTTTTTCGTCTTC SeD_A0289 306556 - 305501 - | ImpA-related N- family protein TERM 387 305900 - 305889 - G 71 -4.4 -4.58395 | CGCAGGCGTGAAAAA TCTG GAGC CAGA TCGCCTAATGTCTCA SeD_A0290 307502 - 306567 - | SciB protein SeD_A0292 309906 - 309412 - | putative cytoplasmic protein TERM 388 309713 - 309655 - G 80 -9.4 -4.128 | gap 1, overlap 309656 ATGCTCATACATAAA GCTGCCCGCCAGCGGCGGCAGGCCATA GTTGAG CACTGAC-GCCGCCGCCTGCGGATAGC GCCGGGCGTCGATGT SeD_A0293 310727 - 309903 - | SciE protein SeD_A0294 311604 - 310714 - | putative cytoplasmic protein TERM 389 311698 - 311720 + H 100 -8.4 -5.4593 | opp_overlap 311696 TTAACTAAATTCATA GGGAGTCATT ATT GATGACACCC TTTTTATTATTTTCG TERM 390 311773 - 311785 + H 70 -4.9 -4.49389 | ATAGATGTCTTTTTT GAAAT ATT ATTTC TTTTAATTCTACAAT TERM 391 313065 - 313077 + G 70 -6.9 -4.1964 | opp_overlap 313042 313061 TTGAGAAAGATCCGG CGCTG ACC CGGCG TTTTCAGGTGTTGCA SeD_A0295 311984 - 314623 + | ATPase AAA-2 domain protein SeD_A0296 314723 - 315265 + | putative cytoplasmic protein SeD_A0297 315289 - 316797 + | SciI protein SeD_A0298 317071 - 317250 + | hypothetical protein SeD_A0299 317263 - 317709 + | putative cytoplasmic protein TERM 392 318328 - 318316 - g 70 -9.1 -3.71213 | opp_overlap 318327, overlap 318310 ACAGAGAAGGCGAAA TCGCG TCT CGCGA GCGGATTGAGCTCTC SeD_A0300 317961 - 318446 + | hemolysin-coregulated protein TERM 393 318457 - 318482 + F 100 -14.1 -4.71463 | TTTAACGGTTGTTTT TCCGGCCAGAT TTAT ATCTGGTCGGA TTTATTGTTTTGATT TERM 394 318854 - 318840 - g 89 -2.7 -5.47159 | GGCGAAGAGAAAAAA CTGCG TCGCC CGCTG AATGCGCAGACCACG TERM 395 318950 - 318934 - g 75 -6.5 -4.4715 | overlap 318936 GGGTAACCTACAAAA TCCCGGA AGC CCCGGAA AAAGCCTGGTACAGC SeD_A0301 318558 - 319049 + | SciN protein SeD_A0302 319053 - 320396 + | hypothetical protein TERM 396 320425 - 320437 + G 86 -7.7 -4.82901 | overlap 320412 GACGCCGCCAGCGGC GGACA TGA TGTCC TTTTTGTCCACCACG TERM 397 321451 - 321431 - g 71 -6.1 -4.258 | gap 1, overlap 321432 321444 321445 CCAGTGATTAACAAA GCGGCGCG GGAAAT CGC-CCGC GTGGGCGGCGCAGTC SeD_A0303 320393 - 321697 + | SciP protein TERM 398 321796 - 321810 + G 100 -5.7 -5.56568 | opp_overlap 321796 CGACATATCACATAA CACGA TCTGT TCGTG TTTTTTTGATCATCT TERM 399 322157 - 322139 - g 70 -3 -4.68994 | overlap 322140 322141 AGCATTAGTTAAAAA TTTCCCCT GTC AGGGGACT GAACCCTCCGTAAAA SeD_A0304 321702 - 322475 + | putative inner membrane protein SeD_A0305 322753 - 323109 + | SciR protein TERM 400 324288 - 324256 - g 100 -13.3 -4.13945 | AGCCGCAGGCGAAAA GCGGGCGACCCGCAG GCG CTGCACGCCGCCTGC GCGCAGGAGCTGGCG TERM 401 324379 - 324368 - g 74 -7.2 -4.15833 | opp_overlap 324368, overlap 324357 324369 AGTACGACCTTAAAA GCCG CCAG CGGC TGTATACCTTCCCGC TERM 402 325653 - 325641 - g 80 -4.8 -5.06451 | overlap 325642 GAGTACGCCAAAAAA GCTG ACTGA CAGC CTGCGCAGCCAGATA TERM 403 326161 - 326194 + G 100 -18.1 -3.14132 | CTGACCATTGCTGAT AGCGCGCTGGCGGCG GGGA CGTTGCCAGCGCGCA TTACTGCCGCAGACA TERM 404 326308 - 326295 - g 74 -9.5 -3.68023 | overlap 326291 AACGCGCAAAATCAA CGCCG GGAC CGGCG ACGTGCTGAACACCC TERM 405 326502 - 326470 - g 83 -10.6 -4.00042 | gap 2, overlap 326471 TTCTGGAGCAAACAA CTGGCTCCGCTGGCGG ACA CCGCCAGC-GACCC-G TGGCGCTACAAACCG SeD_A0306 323143 - 327012 + | SciS protein SeD_A0307 327012 - 327800 + | putative cytoplasmic protein SeD_A0308 327827 - 328213 + | putative periplasmic protein SeD_A0309 328240 - 328758 + | putative cytoplasmic protein TERM 406 329384 - 329350 - g 74 -10.6 -3.56092 | overlap 329351 TCAGGACTGGTGAAA GCCGCGGTAGCAGC GGCGCAG GCTGCCGCCGCCGC AGGTATGGCGCAGGA TERM 407 329386 - 329351 - g 72 -12.4 -2.73441 | overlap 329350 CAGGACTGGTGAAAG CCGCGGTAGCAGCGGC GCAG GCTGCCGCCGCCGCAG GTATGGCGCAGGATG TERM 408 330677 - 330666 - g 71 -5.8 -4.34771 | CAAAATGGATGAAAA CAGC TCCT GCTG GATACGCGTCAGCTA TERM 409 330786 - 330768 - g 73 -5.3 -4.62069 | gap 1 GGTGGATTTCAAAAA CGGC-GAT CCGG ATCTGCCG ATCATCGTGGGGCGT SeD_A0310 329155 - 331344 + | Rhs-family protein SeD_A0311 331368 - 331814 + | hypothetical protein TERM 410 331830 - 331815 - f 73 -7.6 -4.0498 | GATAAAAACGAATAA TCACAC GGAG GTGTGA CCATGTATGAAGCAG TERM 411 334010 - 333998 - f 77 -10.5 -3.44527 | CACGGATGAGGAGAA GCGCG AGA CGCGC TGGCAGTACACGCCG TERM 412 334926 - 334916 - f 72 -8.2 -3.72027 | AGCGGTGATGAACAA CCGG CTG CCGG GCTGTGGTCGTGACC TERM 413 336046 - 336019 - g 79 -2.9 -5.16151 | TAAACTTAATAAAAA CTTAAATCATT ATGAGA AATTATTTAAG GCTGATGATTTTTCA SeD_A0313 335909 - 336346 + | hypothetical protein SeD_A0315 337355 - 337233 - | hypothetical protein TERM 414 337498 - 337530 + r 100 -9.3 -5.47218 | opp_overlap 337504 AATTTCTTTAACTTT TATAAAGGTCGGATA TTA TACCCGAACTTTATA TTTTTTTAAATAAAA SeD_A0316 337810 - 337601 - | hypothetical protein TERM 415 338920 - 338891 - g 76 -12.1 -3.10344 | gap 1 GGGTGACGGAACAGA CGGAC-CCCGGCGG CAG CCGCCGGGTATACG GGTATAACGCGCTGA TERM 416 339113 - 339086 - g 74 -10.6 -3.53091 | gap 1 ACCGTCTGCTGGAAA TCCGCCGCAGGCA GCA TGA-TGCGGCGGA AGGCGGAGAGCCGGA TERM 417 339522 - 339510 - g 71 -4.7 -4.57569 | opp_overlap 339511 339519, overlap 339511 TGAGCTGCTGAAAAA GCGGC ACA GCCGG CAGGGGGTGACGGAT SeD_A0317 337906 - 340680 + | Rhs-family protein TERM 418 340822 - 340801 - g 78 -6.7 -4.61231 | gap 1, overlap 340805 GGATAGGTTCAAAAA TTAACTGGTC AAA GACCAG-TAA GCATGAAAGTCTGAA TERM 419 340819 - 340805 - g 76 -10 -3.81256 | overlap 340801 AGGTTCAAAAATTAA CTGGTC AAA GACCAG TAAGCATGAAAGTCT SeD_A0318 340677 - 341123 + | hypothetical protein TERM 420 341129 - 341158 + T 100 -10.7 -5.64873 | opp_overlap 341129 341124 341121 TAAGATATAATGACA GCCGGGAAGAATT ATAT AAACCTTCCCGGC TTTTTTATTATTCAA TERM 421 341158 - 341129 - T 82 -12.9 -3.01979 | opp_overlap 341129, overlap 341124 341121 TAAGATATAATGACA GCCGGGAAGAATT ATAT AAACCTTCCCGGC TTTTTTATTATTCAA SeD_A0319 341446 - 341189 - | hypothetical protein TERM 422 341252 - 341239 - G 71 -8.1 -3.87815 | opp_overlap 341239 341245 GTTTAGCCTGATAAA GCTGC TCGC GCAGC TTCTGCTCCTCGTTA SeD_A0320 341508 - 341627 + | hypothetical protein SeD_A0321 342075 - 342215 + | rhs core protein with extension SeD_A0322 342886 - 343353 + | hypothetical protein TERM 423 343980 - 344004 + T 75 -2.8 -5.21236 | gap 1 GAATAATGTGTAAAA GCCG-GAGGGG TTAT CTTTTCCCGGC TTTTTATTATCAATT SeD_A0324 344256 - 344014 - | putative cytoplasmic protein TERM 424 344462 - 344476 + r 80 -10 -3.85698 | ACTGTTAAAGATGTC TACCGG GAG CCGGTA TTTCTGAAGCCACCA SeD_A0325 344600 - 344451 - | hypothetical protein SeD_A0327 345775 - 345903 + | hypothetical protein TERM 425 346346 - 346403 + T 85 -3.8 -5.46706 | opp_overlap 346353 346356, overlap 346343 346339 346353 346356 346356 TATCGGCCTTAATAG TAAACAACTATTA-GTGTATTGCGCCTT GTTT AAGGCGTAATACACATCA-AGTTTTTCA TTTTTCTTTTACAAT TERM 426 346353 - 346396 + T 85 -6.3 -5.24003 | opp_overlap 346353 346356, overlap 346343 346339 346346 346356 346356 CTTAATAGTAAACAA CTATTA-GTGTATTGCGCCTT GTTT AAGGCGTAATACACATCA-AG TTTTTCATTTTTCTT SeD_A0328 346523 - 346401 - | hypothetical protein TERM 427 346536 - 346556 + H 70 -9.7 -3.05997 | opp_overlap 346531, overlap 346532 CACTAAATCATTCAG CGTGAAGCT GGG AGCTACACG TGTGATTTATCACGC SeD_A0330 347186 - 349696 + | outer-membrane fimbrial usher protein TERM 428 349962 - 349948 - g 74 -7 -4.3129 | GAGCGATGAGCAAAA GGCGGG TAA CACGCC TACCGTATTGCTGCT SeD_A0331 349718 - 350188 + | putative fimbrial structural subunit TERM 429 350454 - 350470 + F 78 -12.3 -2.66034 | CACTCTTTTGTGAGC GGGGCTT TAT AAGCCCC TGGTATAAGGTTTGT SeD_A0332 350596 - 351417 + | polysaccharide deacetylase family protein SeD_A0333 351898 - 352029 + | TnpA SeD_A0334 352232 - 353179 + | LysR-family transcriptional regulator SinR TERM 430 353254 - 353274 + T 73 -7.6 -4.11216 | gap 1, opp_overlap 353241 353237, overlap 353255 GAGGCATCGAGATAT G-CGACTGG TCAG CCAGTCGTC TTTTGACGATGCCCA TERM 431 353255 - 353272 + T 82 -11.3 -3.65542 | opp_overlap 353241 353237, overlap 353254 AGGCATCGAGATATG CGACTGG TCAG CCAGTCG TCTTTTGACGATGCC SeD_A0335 354237 - 353518 - | hypothetical protein TERM 432 353594 - 353608 + g 76 -2.8 -5.07053 | TAAGCGGTATGTTCA TCACCA GCA TAGTGA TTTTTTGAAATGCTT SeD_A0336 354499 - 354380 - | hypothetical protein TERM 433 354559 - 354536 - R 95 -11.8 -3.87815 | CCCGACCTGGATAAA GCCCGTTATC CAGG AATAACGGGC AAAAATATTTACTCA SeD_A0337 354975 - 354568 - | periplasmic protein TERM 434 355283 - 355256 - R 79 -9.9 -3.66999 | gap 1, opp_overlap 355260, overlap 355259 355260 AGTTACGGAGTGAAA CAATCCCGCCGC GGTGA GCGGCAGG-TTG CTTACAAGGTGAATG TERM 435 355281 - 355259 - R 74 -8.3 -3.9693 | opp_overlap 355260, overlap 355256 355260 TACGGAGTGAAACAA TCCCGCCGC GGTGA GCGGCAGGT TGCTTACAAGGTGAA TERM 436 355280 - 355260 - R 78 -11.8 -2.97676 | opp_overlap 355260, overlap 355259 355256 ACGGAGTGAAACAAT CCCGCCGC GGTGA GCGGCAGG TTGCTTACAAGGTGA TERM 437 355260 - 355280 + r 73 -9.6 -3.34344 | opp_overlap 355260 355259 355256 ACGGAGTGAAACAAT CCCGCCGC GGTGA GCGGCAGG TTGCTTACAAGGTGA SeD_A0338 356052 - 355285 - | hydrolase YafV TERM 438 356141 - 356124 - H 100 -14.1 -5.08088 | AAGCGGCAAGAAAAA GCCCCGC GAAA GCGGGGC AGGAAAGACACGAGA TERM 439 357854 - 357834 - H 72 -8.9 -3.64822 | ATTCGCCCATGCAAA CCACGCCGG TAT CCGGAATGG CGCCTGCATCAGAAC TERM 440 358422 - 358392 - H 80 -12.6 -3.03159 | overlap 358381 GGAAGCCGCGGAACA CCGGTGCGGAAATC ATT GATTTTCGCATCGG TGTGAGGTTAAACGG gmhA 358845 - 359423 + | phosphoheptose isomerase TERM 441 359472 - 359505 + F 72 -8.1 -3.794 | opp_overlap 359473, overlap 359473 TGGTTGCGCTCAGAA ACCCCAGTCACATAG TTAT CTATGTTCCTGGGGA TTTCCTCCCTTACCG TERM 442 359504 - 359473 - f 95 -11.6 -3.85698 | opp_overlap 359472 359473 GGTTGCGCTCAGAAA CCCCAGTCACATAG TTAT CTATGTTCCTGGGG ATTTCCTCCCTTACC TERM 443 359473 - 359504 + F 77 -11.6 -2.87319 | opp_overlap 359473, overlap 359472 GGTTGCGCTCAGAAA CCCCAGTCACATAG TTAT CTATGTTCCTGGGG ATTTCCTCCCTTACC TERM 444 360363 - 360342 - g 73 -8.7 -3.91798 | TAACGGGGAATGAAA CCTGGCAAA AGAT TATGCCAGG CGAATGGGCGTTATT SeD_A0341 359636 - 360403 + | glutamine amidotransferase, class II SeD_A0342 361114 - 360374 - | hypothetical protein TERM 445 361113 - 361100 - G 91 -3.8 -5.46657 | opp_overlap 361087, overlap 361087 CATCGCAAGAAAAAA TGCG ATTTTA CGCA TACTGCTTGTTCCTT SeD_A0343 361364 - 362419 + | DNA polymerase IV TERM 446 362789 - 362814 + G 75 -3.9 -4.85599 | gap 1 CAGATCTGCATCCGG GGC-GCGGCTAT CCT ATTGGCGCAGCC TTTTTCTCGCGTGGA TERM 447 363175 - 363192 + G 70 -6.9 -4.13945 | overlap 363191 GGGCAAGCTATCCTG CGTCGTC ATGT GGCGGCG TTTTCGCATAACGGT SeD_A0344 362638 - 363777 + | release factor H-coupled RctB family protein TERM 448 364189 - 364153 - g 91 -9.5 -4.66318 | opp_overlap 364153 364152 AGCACGTTAATAAAA CCGACTCGGCA-GTGCG GGCCA CGCACCTGGCGAG-CGG GATTAGTGTGAAGGT SeD_A0345 363774 - 364388 + | putative peptide chain release factor H TERM 449 364505 - 364529 + T 76 -8.5 -4.18763 | overlap 364506 ATATTCCATATTGAT AGCCCGTCC AGAAATG GGACGGGCA TTTTAGCGCTTTCTT TERM 450 364506 - 364528 + T 78 -12 -3.10173 | overlap 364505 TATTCCATATTGATA GCCCGTCC AGAAATG GGACGGGC ATTTTAGCGCTTTCT pepD 366000 - 364543 - | aminoacyl-histidine dipeptidase TERM 451 365724 - 365749 + g 81 -2.5 -5.40072 | GCTGGATAGGATCTG TAGTGAAGTCG TGAA CGGTGTCGCTA TTTTTTTGCGGCACC TERM 452 365981 - 365958 - G 83 -7.6 -4.57837 | gap 1 AGATTTTGGCAAAAA TATC-CCACAA AGG TTGTGGTGATA ACTGAGACAGTTCAG TERM 453 366594 - 366612 + G 73 -10.2 -3.33003 | opp_overlap 366594, overlap 366586 ACGATTTTCGCTAAA CCGGCGGG CCG TCCGCTGG TTGATGATTATGTTA gpt 366249 - 366707 + | xanthine phosphoribosyltransferase TERM 454 366722 - 366746 + F 100 -17.1 -4.78572 | overlap 366724 ATCAGCAGCTTTTCA GAGCGCCCGGC AAT GCCGGGCGCTG TTTTATTGGTTACAA TERM 455 366724 - 366744 + F 100 -19.7 -4.00694 | overlap 366722 CAGCAGCTTTTCAGA GCGCCCGGC AAT GCCGGGCGC TGTTTTATTGGTTAC TERM 456 367314 - 367344 + G 70 -3 -4.70659 | overlap 367315 ACGTGAAATGGAATT TGCCGTTCCTGGCG GTT CGCCTGTCACCGCG TTTTTACATATGCCG frsA 366796 - 368040 + | fermentation-respiration switch protein SeD_A0349 368098 - 368499 + | sigma factor-binding protein crl SeD_A0351 369602 - 368550 - | outer membrane pore protein E SeD_A0350 369565 - 369681 + | hypothetical protein TERM 457 370138 - 370155 + G 71 -6.3 -4.35926 | CAAAGCCGCCTGATT CAACTGT GGGA GCAGTTG TTTTCAATTTACGGT proB 369886 - 370989 + | glutamate 5-kinase proA 371001 - 372248 + | glutamate-5-semialdehyde dehydrogenase SeD_A0356 373214 - 372687 - | transposase SeD_A0357 373510 - 373211 - | IS3, transposase orfA SeD_A0359 374299 - 374451 + | hypothetical protein TERM 458 374568 - 374594 + F 77 -11.2 -3.22884 | opp_overlap 374565 TCGTCAAATTAATGT CTATATATTTAT TGA ATAAATATATAG TTCATAACTTACTAC SeD_A0360 374799 - 376031 + | putative permease TERM 459 376039 - 376049 + F 72 -3.2 -5.04325 | GTTTCTGATTATAGA CACG AAG TGTG TTTTTATACTTTCCA TERM 460 376318 - 376336 + G 82 -5.3 -5.12971 | gap 1, opp_overlap 376308 376304 AGAACGCGGTCGCAC CGT-TCGG CACC CCGACACG TTTTTATTGAATATT TERM 461 377170 - 377196 + G 70 -3.1 -4.80178 | gap 1, opp_overlap 377177 AACGGCTGGCATGTT GC-TGAAAGATA TTCG TATCTCTCACGC TTTTATTGGTTCATG leuC 376163 - 377584 + | 3-isopropylmalate dehydratase, large subunit leuD 377586 - 378212 + | 3-isopropylmalate dehydratase, small subunit TERM 462 378755 - 378742 - g 74 -2.3 -5.0133 | TACGGCTGGAAAAAA CTGGC CTTC GACAG GATCATTCGGTCCGT SeD_A0363 378227 - 379105 + | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase SeD_A0364 379105 - 380019 + | haloacetate dehalogenase H-1 TERM 463 380108 - 380080 - g 100 -5.1 -5.52384 | opp_overlap 380083 380084 380095 380105, overlap 380082 380083 380084 CCTGTAGGAAAAAAA CATCGCCAGCCCC TTG AGGGCTGGCCTTC TGTTGAAGATCTTTT TERM 464 380106 - 380082 - g 79 -7.7 -4.40552 | opp_overlap 380083 380084 380095 380105, overlap 380080 380083 380084 TGTAGGAAAAAAACA TCGCCAGCCCC TTG AGGGCTGGCCT TCTGTTGAAGATCTT TERM 465 380105 - 380083 - g 74 -11.2 -3.23247 | opp_overlap 380083 380084 380095, overlap 380082 380080 380084 GTAGGAAAAAAACAT CGCCAGCCCC TTG AGGGCTGGCC TTCTGTTGAAGATCT TERM 466 380083 - 380105 + G 76 -10.5 -3.67052 | opp_overlap 380083 380082 380080 380084, overlap 380084 380095 GTAGGAAAAAAACAT CGCCAGCCC CTTGA GGGCTGGCC TTCTGTTGAAGATCT TERM 467 380084 - 380104 + G 83 -14 -2.79749 | opp_overlap 380084 380083 380082 380080, overlap 380083 380095 TAGGAAAAAAACATC GCCAGCCC CTTGA GGGCTGGC CTTCTGTTGAAGATC TERM 468 380104 - 380084 - g 83 -14.7 -2.52863 | opp_overlap 380083 380084 380095, overlap 380083 380082 380080 TAGGAAAAAAACATC GCCAGCCCC TTG AGGGCTGGC CTTCTGTTGAAGATC SeD_A0365 380053 - 381018 + | transcriptional regulator, LysR family TERM 469 381712 - 381700 - f 71 -3.5 -4.83032 | opp_overlap 381700 AGATGAAATAGAAAA TTAAT ATT ATTAA TTAAATGAATATGAA SeD_A0366 382169 - 382324 + | putative outer membrane protein TERM 470 382337 - 382362 + T 77 -10.5 -3.38046 | overlap 382334 382338 TGAATTCTGGCCTGT CTCAGGGATAC GATC GTATCCCTGAA TATTTCCCATCAAAA TERM 471 382338 - 382361 + T 83 -14 -2.62613 | overlap 382337 382334 GAATTCTGGCCTGTC TCAGGGATAC GATC GTATCCCTGA ATATTTCCCATCAAA SeD_A0367 383130 - 382372 - | fimbrial chaperone protein TERM 472 382890 - 382872 - GT 77 -10.2 -3.38046 | opp_overlap 382882, overlap 382870 GCTGCATTTTAAATA CCGGCGGC AGC GCCACCAG CGGCGTTTTGCTGTT TERM 473 382882 - 382895 + gT 70 -5.2 -4.46656 | opp_overlap 382872 382870, overlap 382891 AAATACCGGCGGCAG CGCC ACCAGC GGCG TTTTGCTGTTATCCG SeD_A0368 384421 - 383096 - | putative fimbrial usher TERM 474 383421 - 383443 + gr 85 -12.6 -3.33696 | overlap 383425 GTTAGCCCCAGGCGA CGCGCCGCCG CCA CGGCGGTGGG TTGATTAACGACAAA TERM 475 383425 - 383439 + gr 78 -12.8 -2.60244 | overlap 383421 GCCCCAGGCGACGCG CCGCCG CCA CGGCGG TGGGTTGATTAACGA SeD_A0369 386987 - 384426 - | outer membrane fimbrial usher protein TERM 476 385689 - 385713 + g 77 -11.3 -3.46602 | GCTGTAACTGAGTTC CGCGCGCCAGC CTT GCTGGCGATCG TTATGCTCTGCGCGC TERM 477 386517 - 386502 - G 87 -8.2 -4.58395 | opp_overlap 386511 GTTATGGCGTAAAAA CAGCGC CAGC GCGCCG CTATCCCACTCTGAA SeD_A0370 387732 - 386971 - | fimbrial chaperone protein TERM 478 387784 - 387759 - R 95 -13.3 -4.18018 | overlap 387760 CCTGGCGATTGAAAA TGGTCTGGCGT TTCA ACGCCAGACCG TAGCGACAATTATTT TERM 479 387783 - 387760 - R 100 -16.8 -3.10597 | overlap 387759 CTGGCGATTGAAAAT GGTCTGGCGT TTCA ACGCCAGACC GTAGCGACAATTATT SeD_A0371 388330 - 387794 - | fimbrial protein TERM 480 389336 - 389319 - g 100 -6.3 -5.97575 | overlap 389323 AACCTATAAAAAAAA TCACCTC CCTA AAGGTGA GTGATGAAAACGTTA SeD_A0372 389282 - 389728 + | putative transmembrane regulator TERM 481 391176 - 391187 + G 100 -4.4 -5.74684 | CGTTATCGGCATACT GGTT ACAA AACC TTTTTATTTTTATTC TERM 482 391698 - 391679 - g 72 -2.2 -4.83615 | gap 1, overlap 391659 391680 CAGGTCGCAGAAAAA CTTTCAACG CTC CGT-GAAAA AGGCGTGTTAATAGC SeD_A0374 390527 - 392077 + | cyclic diguanylate phosphodiesterase (EAL) domain protein SeD_A0375 392177 - 392920 + | putative response regulator SeD_A0376 392893 - 393381 + | putative inner membrane protein SeD_A0377 393781 - 394305 + | attachment invasion locus protein SeD_A0378 394449 - 395090 + | putative response regulator SeD_A0379 395101 - 395325 + | hypothetical protein SeD_A0380 395359 - 395742 + | cytochrome c type biogenesis protein CycH TERM 483 395760 - 395817 + T 74 -8.09999 -3.88603 | opp_overlap 395764, overlap 395753 395772 TTATTTTGCAGGCAA TATATGCCTGTTTAGCGCGCGCGCCGC ACTG GCGACGCGCGCGCTATTTGGGCTAACC TTGCTTTTTCTCGCT TERM 484 395813 - 395764 - T 93 -15.5 -3.10344 | opp_overlap 395753 395760 395772 TTTGCAGGCAATATA TGCCTGTTTAGCGCGCGCGCCGC ACTG GCGACGCGCGCGCTATTTGGGCT AACCTTGCTTTTTCT TERM 485 395772 - 395805 + T 100 -23.9 -3.61103 | opp_overlap 395764, overlap 395760 CAATATATGCCTGTT TAGCGCGCGCGCCGC ACTG GCGACGCGCGCGCTA TTTGGGCTAACCTTG SeD_A0381 397269 - 395812 - | outer membrane protein OprM TERM 486 396602 - 396566 - G 74 -11.5 -3.29511 | opp_overlap 396561 396570 TTGATTTCGGCAGAA CGCAGCGCGATCTCCGC CAT ACGCAGATCGAGCTGTG TGGCGTTGCCTGTCC SeD_A0382 400453 - 397286 - | OqxB TERM 487 399675 - 399690 + g 71 -4.6 -4.57837 | opp_overlap 399660 CGCAGACGCGTCACC TCGCCG TCAG CGCCGA TTTTTACCACAATCT TERM 488 400381 - 400370 - G 83 -7.2 -4.59773 | CGGCAGTTTTAAAAA GGCG ATAG CGCC AGCCAGCAGCATTAA SeD_A0383 401676 - 400450 - | efflux transporter, RND family, MFP subunit TERM 489 400906 - 400942 + g 70 -3 -4.82901 | overlap 400891 400907 400910 CTGATAAGGCAGCCC GTTATCGGTGGTTAAC CCCAT GTTGACTACCGGTGGA TTTTTGTCGGAGCGG TERM 490 401214 - 401230 + g 81 -6.5 -4.68593 | GCGCATTACGCGTGG CGGTGAC ATC GTCAGCG TTTTTACGTGATACG TERM 491 402392 - 402410 + G 70 -3 -4.74103 | overlap 402393 TGACCCTGTTGGTGC TGACGATC CCC GGTCGCCG TTTTTACCTTAAAGG TERM 492 402918 - 402892 - g 74 -3.4 -4.86621 | overlap 402893 402894 ACCGTCAACCAAAAA GGCGCGCTCACG GTG CGGGCGACCGCC GTCGGTGGACAGACC SeD_A0384 401953 - 404256 + | copper-translocating P-type ATPase cueR 404253 - 404717 + | Cu(I)-responsive transcriptional regulator TERM 493 404976 - 404962 - g 70 -7 -4.07568 | opp_overlap 404949 CGCCGCCCTGCAAAA GGCCGG TTT CCCGCC GCGCGAGAGGTAATC SeD_A0386 404795 - 404989 + | hypothetical protein SeD_A0387 405188 - 405033 - | hypothetical protein TERM 494 405197 - 405177 - G 75 -6.1 -4.60678 | opp_overlap 405179 405180, overlap 405180 CAAAAAGATAACAAA TAAGTAGCG CAA CGCTACCTT GTTACGTCGCTTTGA TERM 495 405194 - 405180 - G 86 -10 -4.34559 | opp_overlap 405179 405180, overlap 405177 AAAGATAACAAATAA GTAGCG CAA CGCTAC CTTGTTACGTCGCTT TERM 496 406064 - 406083 + G 75 -7.1 -4.4009 | opp_overlap 406064 406063, overlap 406066 GATTTTTTATAACAT TGCCGCC ATGCTC GGCGGTA TTTTCTACGGTACGC TERM 497 406138 - 406125 - g 86 -6.7 -5.00884 | ATTGGGCGTAAAAAA GCGAT CATG ATCGC CGCCTTTCTTGCGCT SeD_A0388 405282 - 406535 + | major facilitator superfamily MFS_1 TERM 498 406571 - 406542 - f 72 -10.7 -2.86124 | gap 1, opp_overlap 406539 406561, overlap 406537 406539 CGCACGTAAACACTA CGCTCCTGGCG-CA TAC TGTCGCCGGGAGCA CGCCTTCCTCCCGTC TERM 499 406561 - 406587 + F 73 -7.9 -4.10453 | opp_overlap 406542 406539, overlap 406539 406584 CCTGGCGCATACTGT CGCCGGGAGCA CGCCT TCCTCCCGTCG TTTTCACGCCCTTTC SeD_A0389 406724 - 408682 + | type III restriction-modification system StyLTI enzyme mod SeD_A0390 408695 - 411664 + | type III restriction-modification system StyLTI enzyme res TERM 500 411714 - 411742 + F 77 -10.2 -3.40299 | opp_overlap 411704 411714 411716 ATAGACCATATAAAA TGGCCGCCGCGC AGCGA GCGTTGCGGTCA TTCTCCCTGTGCTAA TERM 501 411742 - 411714 - f 74 -5.8 -4.60143 | opp_overlap 411714, overlap 411704 411716 ATAGACCATATAAAA TGGCCGCCGCGC AGCGA GCGTTGCGGTCA TTCTCCCTGTGCTAA SeD_A0391 412159 - 413562 + | cytochrome bd-II oxidase subunit 1 TERM 502 413744 - 413760 + G 75 -5.7 -4.59853 | overlap 413750 CGAAACCTGGCTGGT GCTGGGC GGG GCCGGGC TTTTTGGCGCGTTCC cydB 413559 - 414569 + | cytochrome D ubiquinol oxidase, subunit II SeD_A0393 414569 - 414700 + | hypothetical protein TERM 503 414715 - 414741 + F 100 -18.8 -4.83169 | ACTGATACCCCCGGA CGCGCTTTCGTC GCT GGCGAAAGCGCG TTTTTATCGACAGAT TERM 504 415582 - 415551 - g 72 -3.7 -4.74103 | gap 2, opp_overlap 415556, overlap 415552 415553 415577 CCCGCAACGCAAAAA CGCGGGC-TTC-CCG TCAC CGGTGAATACCAGCG GCTGGAGCTCATTCG SeD_A0394 414906 - 415910 + | AraC-family transcriptional regulator TERM 505 416579 - 416563 - g 74 -7.9 -4.08767 | opp_overlap 416552 TTGACGTCGCGAAAA CCGGCGT TTG ATGCCGG GGGAGAAGTGAAGCT TERM 506 417465 - 417441 - g 91 -7.2 -4.84359 | gap 1, opp_overlap 417441 417452 CGATCTCGATAAAAA CAACGTCAGCA CCCG TGCCG-CGTTG CTTTATCTGTTCGAC SeD_A0395 416074 - 418164 + | ferrichrome-iron receptor SeD_A0396 418835 - 418203 - | putative transport protein TERM 507 418450 - 418433 - G 76 -2.7 -5.08824 | GCGTTACGGAAAAAA TACTGAT AAAA AACAGTA CGGTTTGCGGATTGG TERM 508 418516 - 418499 - G 74 -2.7 -4.86731 | gap 1 CCCGGCGAAAGAAAA TTGTCCAC GGG GCGG-CAA TCGGCGTCTGGAGCG TERM 509 418700 - 418680 - G 100 -12.5 -4.63932 | opp_overlap 418683 CAGCCCGGAATAAAA GGCGTCTCC CGT GGCGACGCC CAGGCCGGTGATGAC TERM 510 419104 - 419121 + G 71 -8.5 -3.85698 | TGCTTGGCGCATTAG CGTTTGT TGTG ACAAACG TTTATGCCGCAGAAA TERM 511 419166 - 419149 - g 91 -3.5 -5.5943 | gap 1, overlap 419150 419151 419153 AAATTATGAAAAAAA CGGACTTT GAT AAAGTC-G CCTCCGAATACACGA SeD_A0397 419067 - 419342 + | protein YahO TERM 512 419400 - 419345 - f 76 -2.2 -5.3167 | gap 4, opp_overlap 419362, overlap 419362 TAAAAAGAAATAAAA GCGTTGCATCATAAAAATACCCGCCTGG GTTT CC-GGCGGGTATTTTTAT--TCCAG-GC AACCGTCATCCGTTT TERM 513 419362 - 419386 + F 100 -12.2 -5.06414 | gap 1, opp_overlap 419362 419345 GTTGCATCATAAAAA TACCCGCCTGG GTTT CC-GGCGGGTA TTTTTATTCCAGGCA TERM 514 419386 - 419362 - f 100 -12.2 -4.91109 | gap 1, opp_overlap 419362, overlap 419345 GTTGCATCATAAAAA TACCCGCCTGG GTTT CC-GGCGGGTA TTTTTATTCCAGGCA TERM 515 419428 - 419403 - f 88 -14.8 -3.06796 | TTTTATTCCAGGCAA CCGTCATCCG TTTTGC CGGATGACGG CCTGCAGTAAACGTA TERM 516 419727 - 419717 - f 100 -8.2 -5.42259 | CGACGCTTAAAAAAA GCGC CAG GCGC TCCATCATATTACGC TERM 517 420039 - 420056 + F 76 -4.7 -4.7373 | GATCGGCTGGTGTCC GCCGACG CGAG TGACGGC TTTTTCCTCCAGTAC TERM 518 421148 - 421169 + F 78 -6.7 -4.72333 | gap 1, opp_overlap 421148 CGCGCTTATTCATAA CAGGC-ATTA CTG TAATTGCCTG TTTTTAAATCTCATT prpB 421277 - 422164 + | methylisocitrate lyase TERM 519 422183 - 422218 + F 74 -8.2 -3.86897 | gap 1, opp_overlap 422181 422182 422202 GTAGGCCTGATAAGG CGAAGCCGCCATCAGGC AAT GCCGGATGGCA-CTACG TTTATCCCGCCTACG TERM 520 422798 - 422777 - g 71 -10.1 -3.57792 | opp_overlap 422775 GTATTCAGCCGGAAA CCGACGATG ATTC CATCGGCGG CCATTTCCTGCATCT prpC 422287 - 423456 + | 2-methylcitrate synthase TERM 521 424523 - 424499 - g 85 -4.2 -5.28778 | gap 1, opp_overlap 424518, overlap 424513 ATTATCGATAAAAAA GGCCCGCTCAA TAAC CCG-GCGGACC GCGATCACTGTATCC TERM 522 424859 - 424831 - g 76 -10.9 -3.74303 | overlap 424827 424832 AAAATTTAAAATTAA CCTGGCGCGTCAG TTC CCGACTCGCCAGC AGCAACGCATTCTGG TERM 523 424858 - 424832 - g 83 -14.4 -2.82955 | overlap 424831 424827 AAATTTAAAATTAAC CTGGCGCGTCAG TTC CCGACTCGCCAG CAGCAACGCATTCTG prpD 423494 - 424945 + | 2-methylcitrate dehydratase prpE 424986 - 426872 + | propionate--CoA ligase TERM 524 426965 - 426947 - T 93 -13.8 -3.5936 | TGTAAAGTCGGGAAA GGGCGGCA GCG CGCCGCCC TGTAACAGAATTAAC hemB 427950 - 426976 - | delta-aminolevulinic acid dehydratase SeD_A0405 428170 - 428289 + | hypothetical protein SeD_A0406 428396 - 428280 - | hypothetical protein TERM 525 428494 - 428480 - H 72 -5 -4.57569 | GCACTCCTGGAAAAA GAAACT TGT AGTCTC ACAATTAGCATTGGC SeD_A0407 429363 - 431408 + | outer membrane autotransporter TERM 526 431475 - 431452 - T 100 -15.4 -4.81851 | opp_overlap 431452 ATTTAAACTGAAAAA TGCCCGTCAA GGAC TTGACGGGCA TTATTGCAAGGAATG TERM 527 431452 - 431475 + T 100 -15.4 -3.61715 | opp_overlap 431452 ATTTAAACTGAAAAA TGCCCGTCAA GGAC TTGACGGGCA TTATTGCAAGGAATG TERM 528 432104 - 432076 - T 72 -5.4 -4.40298 | gap 1 ATTGAAATGAATAAA GGCAAACTGATCA GTAT TAACC-GTTTGCC CTCCGAATATTAACA TERM 529 432159 - 432124 - T 77 -3.9 -5.19251 | gap 1, overlap 432125 432145 GAATATTAACAAAAA TGTTGCGCCTCGT-CT GATAT AGCGCGAGGCGCGACG ACTCAGGATGCAGGA SeD_A0409 433319 - 432162 - | beta-lactamase TERM 530 432516 - 432505 - G 77 -4.4 -4.84359 | opp_overlap 432505, overlap 432515 CTACGGTGATAAAAA TCTG AAGA CAGA TACTGTTGCATCCAG TERM 531 433210 - 433194 - G 70 -5.1 -4.46212 | overlap 433196 GCCGCTACCATAAAA GATATGC TCG GCATAAC GATCAACGATATCAG SeD_A0410 433523 - 433365 - | hypothetical protein TERM 532 433808 - 433818 + G 81 -8.2 -4.2828 | overlap 433807 ATGAAGTGCCTATCA GCGC AGC GCGC TTTTGGTCGCTGGAC smbA 433666 - 434886 + | protein SbmA TERM 533 435883 - 435865 - g 80 -8.8 -4.13767 | TGGCCGAGGCCAAAA CGGGCAAG ACG CTTGCGCG GGAAATGTTGCCCGG SeD_A0412 434901 - 435995 + | putative outer membrane lipoprotein SeD_A0413 436341 - 436033 - | inner membrane protein YaiY SeD_A0414 436609 - 436824 + | hypothetical protein TERM 534 436844 - 436813 - T 87 -10.2 -4.18494 | gap 1, overlap 436815 GATGGTGAGGTAAAA GACGCCCGATAAACG TTG CGCT-ATCGGGCGTG CGCTATTACATCGTG TERM 535 436842 - 436815 - T 93 -12.8 -3.69216 | gap 1, overlap 436813 TGGTGAGGTAAAAGA CGCCCGATAAACG TTG CGCT-ATCGGGCG TGCGCTATTACATCG SeD_A0415 437944 - 436850 - | D-alanine--D-alanine ligase TERM 536 438008 - 437996 - H 75 -6.2 -4.49311 | overlap 437985 ATTACCACGACAAAA CGCG GGTTT CGCG GGGTTCTGCCATAAT SeD_A0416 438022 - 438735 + | extensin family protein TERM 537 439540 - 439550 + F 72 -3.2 -5.04249 | TTACCTTATCCTGCG CTGG TGA TCAG TTTGTTTTTTACCAC TERM 538 440123 - 440148 + F 85 -14.1 -3.03781 | overlap 440118 GCCAATAGCGGTGCA TCGTAACGGCG CTTC TGCCGTTACGA TATGGTTTAAATTAA SeD_A0419 440412 - 440672 + | putative cytoplasmic protein SeD_A0420 440858 - 440697 - | hypothetical protein TERM 539 440782 - 440726 - G 100 -21.3 -3.36839 | opp_overlap 440726, overlap 440724 TTATGAAATAACATA GCCGCTTCGTTTTTATTTTCTTCTG GGTAATA CAGAGCAAAATAAAAACGAAGCGGC TATGGTAATAACAGT TERM 540 440726 - 440782 + g 100 -23.5 -2.82635 | opp_overlap 440724 440726 TTATGAAATAACATA GCCGCTTCGTTTTTATTTTCTTCTG GGTAATA CAGAGCAAAATAAAAACGAAGCGGC TATGGTAATAACAGT SeD_A0421 441025 - 441345 + | phosphate starvation-inducible protein PsiF SeD_A0422 441437 - 442549 + | AdrA protein proC 443373 - 442564 - | pyrroline-5-carboxylate reductase SeD_A0424 443407 - 443556 + | hypothetical protein SeD_A0425 443513 - 443968 + | protein YaiI TERM 541 444150 - 444118 - f 72 -10.5 -2.89602 | opp_overlap 444119 444119, overlap 444117 TTGCTGATATCAAAT CCTGCGTATGCGCAG TTC CTGCGTATGCGCAGT TCCTGGGGGAACGCC TERM 542 444119 - 444149 + F 100 -18.4 -3.14132 | opp_overlap 444118 444117, overlap 444119 TGCTGATATCAAATC CTGCGTATGCGCAG TTC CTGCGTATGCGCAG TTCCTGGGGGAACGC aroK 444170 - 444715 + | shikimate kinase TERM 543 444808 - 444796 - g 74 -4.7 -4.68593 | GTCACCATTGAAAAA GGCAC GCC GGGCC AGACGGTGACGTGGT SeD_A0427 444742 - 444933 + | hypothetical protein SeD_A0428 445184 - 445861 + | aro operon protein SeD_A0429 445932 - 446216 + | protein YaiE TERM 544 446221 - 446250 + T 81 -12.9 -2.72344 | gap 1, overlap 446222 GCTATTTGTAACGGT GA-GTCCCCTCTCC GGC GGAGAGGGGCCCTC TGGTTAGCGCTGCGC TERM 545 446222 - 446248 + T 79 -12.2 -2.90723 | overlap 446221 CTATTTGTAACGGTG AGTCCCCTCTCC GGC GGAGAGGGGCCC TCTGGTTAGCGCTGC rdgC 447165 - 446254 - | recombination-associated exonuclease RdgC TERM 546 446891 - 446903 + g 74 -7.7 -4.13767 | overlap 446893 CGTCCCTGATCGGCT TCCAG TTT CTGGA TTTTCGCCTCCAGAG TERM 547 448078 - 448100 + G 77 -4.8 -4.85782 | opp_overlap 448078 AGCGCCTGTACAAAA CGGTTCCGTC GCT GATGAAATCG TTTGTTTTTGGCGGC SeD_A0431 447291 - 448199 + | N-acetyl-D-glucosamine kinase SeD_A0432 449447 - 448221 - | protein AraJ TERM 548 448433 - 448443 + g 77 -8.2 -4.07568 | overlap 448431 CGCCCAGCAGTTCGC CGCC TTT GGCG TTTTGCAGCAGCAGG TERM 549 448927 - 448917 - G 74 -2.4 -5.1356 | CGCGATCAATAAAAA GGTG TAG CGCC AGCTAAATTCCTGGC TERM 550 449114 - 449073 - G 77 -3.5 -5.0538 | gap 1, overlap 449074 449075 GCCGACGCCAAAAAA GGCGCCGTGCGGAAAGCCGG AAA CCAGTCTGCCG-ACGGCGAG CATCAGATATGACGA TERM 551 449427 - 449413 - G 73 -5.6 -4.64861 | overlap 449414 CCTGCCGAAAATAAA GGCGCA TGT TGCGCG CTGTGGCTGTGAATT SeD_A0433 452706 - 449566 - | exonuclease SbcC TERM 552 449881 - 449863 - G 71 -10.2 -3.28712 | TTCGCCGCCTGATAA CGTTCGCG TAT CGCGCACG GCGTCGGCCTGCCAG TERM 553 450798 - 450744 - G 80 -10.6 -3.78329 | opp_overlap 450782 GCGCAGGAAGGGAAA GCGTATACTGCGCCAAATCAGCCGTC AGC GACGCCTGACGCTGCGCAATCTGCGC GGTAAAGCGCGCTAC TERM 554 451865 - 451881 + g 77 -4.4 -4.83615 | gap 1, overlap 451860 451864 GCCAGAGTCAGCGCC GCG-AGC TGCG GCTGCGC TTTTTCTCGCGCCTC TERM 555 451984 - 452007 + g 84 -8.8 -4.24075 | opp_overlap 451971, overlap 451985 AAGGTGCTGCTGCTG TACCTGCTGG TCGG CCAGCAGGCG TTTCTCTTCGTCAGT SeD_A0434 453905 - 452703 - | ATP-dependent dsDNA exonuclease TERM 556 453777 - 453761 - G 72 -3.7 -4.73388 | AACCGGTATCAAAAA TATCGCC AGC GACAATA ATGGCATCCACCTGA phoB 454119 - 454808 + | phosphate regulon transcriptional regulatory protein PhoB TERM 557 454810 - 454851 + F 100 -15.3 -3.85389 | gap 1 CGACCCGCTTTTAAT GCCTTTTCCGCCAGTAGAAC ACA GGTTT-CTGGCGGAGAAGGC TTTCCATTCTTGAGG TERM 558 454938 - 454954 + G 100 -6.5 -5.69379 | CTCTGTTGCATCCCC GCGCTTA TCC TTAGCGC TTTTTTTGGTTATCT TERM 559 455365 - 455350 - g 74 -4.6 -4.68593 | CCCAGTATTTAAAAA CGCGTG ATTT CACCCG TCCGCTTCATTTGGT phoR 454878 - 456173 + | phosphate regulon sensor protein PhoR TERM 560 456200 - 456221 + T 100 -13.1 -4.90525 | opp_overlap 456203 AAGTATAACTTTCCA TAAGCCAGC GGAT GCTGGCTTA TTTTCTTTGCAGTTA TERM 561 456218 - 456203 - T 77 -10.4 -3.31799 | opp_overlap 456200 TATAACTTTCCATAA GCCAGC GGAT GCTGGC TTATTTTCTTTGCAG TERM 562 456246 - 456262 + T 80 -9.5 -3.98747 | CAGTTAAGACGGGCT CGTTGAA ACA TTCAACG TTTGGTGATTTTTTG SeD_A0437 456535 - 456386 - | hypothetical protein TERM 563 456874 - 456899 + G 74 -9.7 -3.61654 | gap 1 TCGGGCCGTTATTTG CGACGCCG-CGT ACC GCGACGGTGTCG TTTGAGGTCGGTATC brnQ 456582 - 457901 + | branched-chain amino acid transport system II carrier protein TERM 564 457923 - 457945 + G 100 -16.3 -5.64304 | opp_overlap 457926 TGACATATGTGTACA CCACGGGGC TTAAC GCCCCGTGG TTTTTTATTGTGTTG SeD_A0439 457916 - 459346 + | proline-specific permease ProY TERM 565 459711 - 459664 - T 72 -9 -3.57144 | gap 1, overlap 459666 CTGGCGATGCGCAAA TAGCGCCGCCAGCCGCAGCCG GGCGTGA CGGC-GTGGCGAGCGACGCTC AATATCGCGTTAGGG TERM 566 459709 - 459666 - T 82 -11.6 -3.36515 | gap 1, overlap 459664 GGCGATGCGCAAATA GCGCCGCCAGCCGCAGCCG GGCGTGA CGGC-GTGGCGAGCGACGC TCAATATCGCGTTAG TERM 567 459990 - 460026 + T 83 -10 -4.08394 | opp_overlap 459985 459987 459997 CGTGCGTAAAGAGTG GGATGAACCGCTCACC CCCCA GGCGGGCGGTTCCACC TTTTACGGCGGCTGT TERM 568 460093 - 460081 - T 74 -3.3 -5.0538 | opp_overlap 460085 CCGTATCTGAAAAAA CTGGG CGT CACAG CGCTATATCTGAATC TERM 569 461088 - 461065 - T 88 -12.4 -3.57462 | CAGCGTATGGCGAAA CTGCGCCAGA GCAG TCTGGCGCTG CGTCGTGGCGGATGC TERM 570 461378 - 461361 - T 100 -12.7 -5.28176 | opp_overlap 461361 CTCACGCATAAAAAA GGCTCGC ATTC GCGAGCC TTTTATCAATGCACT TERM 571 461361 - 461378 + T 100 -12.7 -4.42653 | opp_overlap 461361 CTCACGCATAAAAAA GGCTCGC ATTC GCGAGCC TTTTATCAATGCACT SeD_A0442 461999 - 461397 - | peroxiredoxin-2 acpH 462790 - 462209 - | [acyl-carrier-protein] phosphodiesterase TERM 572 463427 - 463400 - g 76 -5.4 -4.70659 | gap 1, opp_overlap 463404 463415, overlap 463401 463402 GTCTACAGTGAAAAA CCGGGCGCCGTCG CCG CGCCGAC-CGCGG GGCTGCACTTTGATG queA 462884 - 463948 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 573 464165 - 464198 + G 76 -9.6 -3.79251 | gap 1, opp_overlap 464164 ATTTGAGTTAGATAC CACC-GATGGTCGCG CGCGT CGCGGTCGTCTGGTG TTTGATCGTGGCATA tgt 464145 - 465272 + | queuine tRNA-ribosyltransferase yajC 465295 - 465627 + | preprotein translocase, YajC subunit TERM 574 465794 - 465764 - g 89 -13.4 -3.53091 | gap 1 ATCCGGCTGTTCAAA TCACTGGCGTGCG CGGCGT CGC-CGCCAGTGA GCAAACGCTGATCCA secD 465655 - 467502 + | protein-export membrane protein SecD TERM 575 468476 - 468452 - g 76 -5.6 -4.72486 | opp_overlap 468455 468456 CAGAAAGTCGAAAAA GAAGGGGCGG ATCAG CCGTCCATTC TGCCGTAAACACGTA secF 467513 - 468484 + | protein-export membrane protein SecF TERM 576 468509 - 468528 + F 100 -10 -6.02914 | TAAGTGTTATCTGAA TCCCGGTC ATAC GATCGGGA TTTTTTTTATGTACC SeD_A0449 468629 - 468994 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 577 469420 - 469430 + G 74 -8.2 -3.9749 | overlap 469419 GTACATCTCCACATT CGCG CAG CGCG TTTGATCTTATCCAT SeD_A0450 469020 - 469712 + | HTH domain protein SeD_A0451 469882 - 470229 + | HNH endonuclease TERM 578 470241 - 470227 - T 72 -2.8 -5.06961 | ATGAACAAAAAGAAA TAAGCA GGC TGCTGA CAAAGTTGTTGGTGC TERM 579 470412 - 470431 + T 100 -6.4 -6.20267 | ACATTGTCACTGGAA TCCCGATC GCAA GGTTGGGA TTTTTTTGTTTTTAA TERM 580 470601 - 470560 - T 76 -5.2 -4.78848 | opp_overlap 470563 GCTGGAAAGAGAAAA CCCCCGC-ACATTGTTCGGT ATTC ACCGG-CAACATTACGGGGG CTAACTTGACCCTAG TERM 581 470824 - 470845 + T 100 -10.1 -5.07107 | opp_overlap 470823 470822 CATGCGCCCGAAACG GGCCAGAAG ACGA CCTCTGGCC TTTTTTGCAGGTTTA SeD_A0453 471721 - 470858 - | nucleoside-specific channel-forming protein tsx TERM 582 471774 - 471764 - R 74 -6.8 -4.21812 | opp_overlap 471764 CGGGAGTGAAAAGAA CGCA ATT TGCG TTTCTAAATATTTCG SeD_A0454 472518 - 472021 - | lipoprotein SeD_A0455 472593 - 472739 + | hypothetical protein nrdR 472712 - 473161 + | transcriptional regulator, NrdR family TERM 583 473374 - 473351 - g 70 -6.6 -4.07687 | opp_overlap 473357, overlap 473357 473358 ATGGCGGGCGCAAAA GCCAAAGGCG CAAC CGCCTATGTC ACGCTTGAACCCTGT TERM 584 473368 - 473357 - g 71 -7.2 -3.92659 | opp_overlap 473357, overlap 473351 473358 GGCGCAAAAGCCAAA GGCG CAAC CGCC TATGTCACGCTTGAA ribD 473165 - 474268 + | riboflavin biosynthesis protein RibD TERM 585 474781 - 474765 - g 74 -7.9 -4.17132 | overlap 474766 474774 AAAGCCGGTAATAAA GGCGCAG AAG CTGCGCT GACCGCGCTTGAAAT TERM 586 474780 - 474766 - g 72 -11.4 -3.09556 | overlap 474765 474774 AAGCCGGTAATAAAG GCGCAG AAG CTGCGC TGACCGCGCTTGAAA ribH 474357 - 474827 + | 6,7-dimethyl-8-ribityllumazine synthase nusB 474848 - 475267 + | transcription termination/antitermination factor NusB TERM 587 475274 - 475316 + F 88 -5.6 -5.61277 | gap 2, opp_overlap 475283 475287, overlap 475304 AAAAAGTGATTCACA GGCCGGAAAGATAGCGGG CGATCGATA CCCGCCGTCT--CCGGCC TTTTCTTTTTTTCTG TERM 588 476268 - 476286 + G 70 -6.7 -4.18018 | opp_overlap 476279 GGATCGCCTTTGTGC GTGACGG AGAAC CTGTCAC TTTTGACTGGAAAGG thiL 475346 - 476326 + | thiamine-monophosphate kinase pgpA 476313 - 476819 + | phosphatidylglycerophosphatase A SeD_A0462 477897 - 476923 - | oxidoreductase, aldo/keto reductase family TERM 589 477163 - 477184 + g 73 -5.3 -4.57569 | gap 1 TATTTGCGCATCATT TTTAT-CGCT TTC AGCGTATAAA TTTTTGCCCACGTCA TERM 590 477360 - 477381 + g 76 -5.2 -4.82901 | gap 1, opp_overlap 477364, overlap 477364 GATCCTGCATGGTGA CAA-ACGGC GCCCA GCCGTGTTG TTTTTGTAGCGCCAG dxs 479816 - 477954 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 591 478127 - 478140 + g 73 -5.2 -4.63932 | CGCCGCTGCCAGCGC CGCC CATAAT GGCG TTTTCTTCCAGCGTC TERM 592 479387 - 479337 - G 71 -9.8 -3.54543 | gap 3, opp_overlap 479337 479336 479334 479384 ATTCATTGCTTCAAA CGCCATACCGGC-G-GTGA-TGGCG CCGT CGCCAATCACACAGACGGTGCGGCG ATCTTTGCCTTCTTT ispA 480739 - 479840 - | geranyltranstransferase TERM 593 480175 - 480194 + g 71 -12.1 -2.53271 | overlap 480174 480173 CGCCAAGTCTAACGG CGGCGCG AATGAG CGCGCCG GTCTTATGGCGATGA xseB 480982 - 480740 - | exodeoxyribonuclease VII, small subunit TERM 594 481375 - 481365 - g 75 -6.8 -4.49756 | overlap 481366 CGCCAAAGATGAAAA CCAG CGT CTGG CGATTCGCGACGCGC thiI 481192 - 482640 + | thiamine biosynthesis/tRNA modification protein ThiI phnV 483481 - 482684 - | 2-aminoethylphosphonate ABC transport system, membrane component PhnV phnU 484344 - 483475 - | 2-aminoethylphosphonate ABC transporter, permease protein phnT 485456 - 484347 - | 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT phnS 486475 - 485462 - | 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein TERM 595 485738 - 485758 + g 93 -12.5 -4.05446 | opp_overlap 485737 485734 AATGACATAAGGGAT GGCCAGCGC GCT GCGCTCGCC TTTGTCGTTGGCCGG SeD_A0471 487392 - 486673 - | 2-aminoethylphosphonate transport, repressor TERM 596 487076 - 487091 + g 75 -6 -4.65895 | opp_overlap 487074, overlap 487074 ACGGTGGTTAACACG CCGCTC AGTA GCGCGG TTTTTGGCTCCCGCC phnW 487532 - 488635 + | 2-aminoethylphosphonate--pyruvate transaminase SeD_A0473 488645 - 489454 + | phosphonoacetaldehyde hydrolase TERM 597 489476 - 489524 + T 88 -12.5 -3.53444 | overlap 489468 489478 489479 TGCCGGATGGCGCTG CCGCTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGGTG TTTACGCCGCCATCC TERM 598 489478 - 489522 + T 90 -13.7 -3.34517 | overlap 489476 489479 CCGGATGGCGCTGCC GCTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGG TGTTTACGCCGCCAT TERM 599 489479 - 489521 + T 100 -17.2 -2.60496 | overlap 489478 489476 CGGATGGCGCTGCCG CTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAG GTGTTTACGCCGCCA SeD_A0474 490141 - 489551 - | protein ThiJ panE 491015 - 490104 - | 2-dehydropantoate 2-reductase SeD_A0476 491141 - 491632 + | hypothetical protein SeD_A0477 493043 - 491679 - | inner membrane transport protein YajR TERM 600 493489 - 493504 + H 74 -8.2 -3.85698 | TGATAGCAAACTTTC CGCGTG ATGG CGCGCG TTTATCAGGCAGAAG TERM 601 494062 - 494072 + G 91 -2.4 -5.88471 | AAATAATAGGCCAGA GAGC GAT GCGC TTTTTTTTAGTCGTA TERM 602 494281 - 494267 - g 73 -5.6 -4.56597 | opp_overlap 494254 GCCGCCGCGGAAAAA GGCGTC GTT GAGGCC CAATCTCTCTTGGGG TERM 603 494726 - 494711 - g 91 -7.6 -5.055 | GTAACCCTGAAAAAA GAGAGA ATTT TCTCTC GCGGGATAACGGCTA SeD_A0478 493568 - 495079 + | putative periplasmic protein SeD_A0479 495091 - 496584 + | tetratricopeptide repeat protein TERM 604 496624 - 496644 + T 100 -11.1 -5.08824 | opp_overlap 496624 AAATGGATAAAAAAA CCGCCGTTT GTG ACACGGCGG TTTTTTCAATAGCAA TERM 605 496644 - 496624 - T 100 -11.1 -5.68039 | opp_overlap 496624 AAATGGATAAAAAAA CCGCCGTTT GTG ACACGGCGG TTTTTTCAATAGCAA cyoE 497553 - 496666 - | protoheme IX farnesyltransferase cyoD 497897 - 497568 - | cytochrome o ubiquinol oxidase, subunit IV TERM 606 497681 - 497652 - G 74 -10.1 -3.62572 | opp_overlap 497678 GATCAGCACGGTAAA GATGAAGGCCG TCATGTTC CAGCCTTCATC AGATTTGGTGTTCAT cyoC 498511 - 497897 - | cytochrome o ubiquinol oxidase, subunit III cyoB 500492 - 498501 - | cytochrome o ubiquinol oxidase, subunit I TERM 607 498546 - 498557 + g 75 -5.8 -4.66833 | opp_overlap 498545 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGACTTCCGG TERM 608 500431 - 500390 - G 95 -14.5 -3.46081 | opp_overlap 500390, overlap 500424 TACCGAAGTAAGTAA TCGCTGCCAGTATCGCCAG TCCC CCGACGATAATTGCAGCGA TCGTTACCATGACGA cyoA 501459 - 500503 - | cytochrome o ubiquinol oxidase, subunit II TERM 609 500994 - 500979 - G 95 -11.8 -4.42806 | opp_overlap 500988 TCACTTTGAAATAAA CCGGCG TGTT CGCCGG GAAGGCGATCTCGTT TERM 610 501071 - 501084 + g 70 -3.1 -4.77036 | opp_overlap 501066, overlap 501072 TCCATGGAAACCACT TCGAT GGTG ATCGG TTTTTCGTCATGCGC SeD_A0485 501828 - 501706 - | hypothetical protein SeD_A0486 503387 - 501912 - | MFS family, muropeptide transporter TERM 611 501981 - 501968 - G 71 -8.1 -3.81755 | ACCCGCCAAAGACAA TGCCG CACA CGGCA ACCGCTACCGCAGTC TERM 612 502431 - 502443 + g 74 -3.4 -4.88736 | AAAGACCGCCGCGCC CATG CTGAA CATG TTTTTATCGGTAATG TERM 613 502753 - 502738 - G 73 -6.1 -4.42806 | opp_overlap 502747 TTACGGCCAAAGAAA TCGCG TAGCGG CGCGA CGACGGCCTGTTCCA TERM 614 503399 - 503418 + H 100 -15 -4.03167 | opp_overlap 503401 ACATAGGCATCTACA GACCCGGC TTCT GCCGGGTC TTGTTGTTGCTATTA TERM 615 503416 - 503401 - H 77 -11.8 -2.92091 | opp_overlap 503399 ATAGGCATCTACAGA CCCGGC TTCT GCCGGG TCTTGTTGTTGCTAT TERM 616 504447 - 504467 + G 86 -7.5 -4.73613 | overlap 504442 GGTCGTGCTGGTGAG CGATCGCTT TAC AGGCGAACG TTTTCTTAATCGTCA SeD_A0488 504313 - 504630 + | protein BolA TERM 617 504686 - 504709 + F 93 -9.6 -4.59984 | opp_overlap 504691, overlap 504691 GCTACAGAATTATGT GAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGAATTTT TERM 618 504704 - 504691 - f 83 -9.5 -4.17425 | opp_overlap 504686 504691 AGAATTATGTGAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGA TERM 619 504691 - 504704 + F 100 -9.5 -5.23292 | opp_overlap 504691, overlap 504686 AGAATTATGTGAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGA tig 504977 - 506275 + | trigger factor TERM 620 506311 - 506332 + F 100 -11.6 -6.22802 | opp_overlap 506311 AAATTTGCACAAAAA CCCGTCAC CTTTCA GTGACGGG TTTTTTTTTGTCACG TERM 621 506332 - 506311 - f 100 -12.3 -4.86033 | opp_overlap 506311 AAATTTGCACAAAAA CCCGTCACC TTTC AGTGACGGG TTTTTTTTTGTCACG clpP 506415 - 507146 + | ATP-dependent Clp protease, proteolytic subunit ClpP clpX 507398 - 508669 + | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 622 508697 - 508725 + F 80 -6.7 -4.8048 | opp_overlap 508702, overlap 508702 ACAATCAGTTAGCCA AAAAAGGGGGGAT TTT ATCTCCCCTTTCG TTTTTCCTGTAAACA TERM 623 508720 - 508702 - f 100 -8.8 -5.09895 | opp_overlap 508697 508702 CAGTTAGCCAAAAAA GGGGGGAT TTT ATCTCCCC TTTCGTTTTTCCTGT TERM 624 508702 - 508720 + F 91 -11 -4.3623 | opp_overlap 508702, overlap 508697 CAGTTAGCCAAAAAA GGGGGGAT TTT ATCTCCCC TTTCGTTTTTCCTGT TERM 625 509024 - 509003 - g 89 -2.9 -5.67967 | overlap 509006 ACCATGATAAAAAAA TCATGCTGG TCGC CCAGAAGGA AGCATCGACGGATGA TERM 626 509307 - 509297 - g 100 -5.4 -5.80364 | overlap 509298 AGCTGAACAAAAAAA TTCC GCC GGAA GTGCTGACGTCACTC TERM 627 509801 - 509788 - g 76 -3.1 -5.10029 | gap 1, overlap 509778 509790 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTCGA TERM 628 509806 - 509790 - g 80 -9.4 -4.17355 | overlap 509778 509788 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTCGATACTG TERM 629 510850 - 510838 - g 70 -3.3 -4.72986 | GACTTTTACGAAAAA CGCGA TAT CCACG TTCACGTGCCGGAAG lon 508855 - 511209 + | ATP-dependent protease La TERM 630 511242 - 511271 + F 100 -8.6 -5.72616 | gap 1, opp_overlap 511242 511241 CGCTAATAAAAACAG GGCTGGCAGG-CT ATTTC GGACTTGCCAGCC TTTTTTTGTATAGCT hupB 511418 - 511690 + | DNA-binding protein HU-beta TERM 631 511726 - 511745 + F 100 -10 -5.45652 | opp_overlap 511726 511725 GTGACAAAGTACAAG GGCGCATC AACT GATGTGCC TTTTTTATTGGCGAT TERM 632 512349 - 512337 - g 70 -9.1 -3.70674 | overlap 512335 TGAGCAGGTAAAACA GGCGA TTT TCGCC ACTCCCGCTTTTCAG TERM 633 512880 - 512862 - g 76 -11.8 -3.07947 | overlap 512854 512853 GAACAAGGGCGAAGA TTTCGCCA CGC TGGCGAAA GAGAAATCTACCGAT TERM 634 513001 - 512986 - g 93 -4.6 -5.50723 | opp_overlap 512986, overlap 512987 GGATTAAAAGAAAAA GGCCAG ATAT CTGGCG TGATTAAGTCGTCTG TERM 635 513000 - 512987 - g 71 -8.1 -3.88807 | opp_overlap 512986, overlap 512986 GATTAAAAGAAAAAG GCCAG ATAT CTGGC GTGATTAAGTCGTCT TERM 636 513760 - 513739 - g 90 -5.1 -5.27923 | gap 1 GAAGCGCAGAAAAAA GCGATGGTGC AGG GCATCA-CGC AGAACAATGCGCAAA ppiD 511981 - 513852 + | peptidylprolyl isomerase TERM 637 513915 - 513900 - f 95 -11.8 -3.89346 | opp_overlap 513900 GTTGTATCCCACAAA GGCCGC TTTC GCGGCC TTTTCCATTTCTGAG TERM 638 513900 - 513915 + F 100 -11.8 -4.39571 | opp_overlap 513900 GTTGTATCCCACAAA GGCCGC TTTC GCGGCC TTTTCCATTTCTGAG SeD_A0495 514002 - 514376 + | competence protein ComEA TERM 639 514412 - 514434 + F 73 -10.7 -3.00601 | overlap 514407 514414 ATTTGCCAGACTGTA GAGGTCATA CCAGT TATGACCTC TGTACTTGTCGTTTA TERM 640 514770 - 514794 + G 70 -2.7 -4.69415 | overlap 514771 GGAGCCAGAAGGGCA GGTGGTGGCCG ATG CGCTCATCACG TTTGTTTGTATTGAT SeD_A0496 514480 - 514878 + | thioesterase superfamily protein SeD_A0497 515679 - 514984 - | ExsB protein TERM 641 517006 - 516994 - H 74 -3.3 -5.055 | TTAACCCGGAAAAAA CTTGC CCT GCGAG ATGCTGTTCCGCGCG TERM 642 517453 - 517463 + H 74 -5.4 -4.68545 | GCCTCATAGAAACCC GGAA CAC TTCC TTTTATCTGTTCACT SeD_A0500 517545 - 518363 + | protein cof TERM 643 518381 - 518399 + T 100 -10.3 -6.0458 | opp_overlap 518381 GATCTCTTCCAGCAA GCCAGAC ATTCA GTCTGGC TTTTTTTTGGTTTCT TERM 644 518399 - 518381 - T 74 -10.3 -3.14344 | opp_overlap 518381 GATCTCTTCCAGCAA GCCAGAC ATTCA GTCTGGC TTTTTTTTGGTTTCT SeD_A0501 519468 - 518413 - | pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 645 519114 - 519141 + g 86 -10.8 -4.13767 | AATGACAGTGGCCGC CGTAAAATTGAA TCTG TTCGATTTTACG TTTTGCGGTACAGGC SeD_A0502 519581 - 520039 + | glutamate uptake regulatory protein TERM 646 520797 - 520781 - g 86 -6.5 -5.07486 | opp_overlap 520785 520790 520791, overlap 520784 TACCGGCAAGAAAAA TATGCGC GTG GCGCGTA TTGACGCGCGTTTTG TERM 647 520790 - 520807 + G 74 -6.9 -4.25283 | opp_overlap 520784 520781, overlap 520785 520791 GAAAAATATGCGCGT GGCGCGT ATTG ACGCGCG TTTTGATCCAACCAT TERM 648 521317 - 521336 + G 90 -5.7 -5.18726 | gap 1, overlap 521308 GGCGTAGCCGACTGG CGGTCGTC AGCCA GACG-CCG TTTTTGTTCTCGGAC SeD_A0503 520080 - 521852 + | ABC transporter, ATP-binding protein TERM 649 522002 - 522017 + G 70 -9 -3.66178 | opp_overlap 522000 522002 ATTTCATTGATAACA TGGTGG CCCG CCACCA TTTACCGTTGGGCAA SeD_A0504 521845 - 523626 + | ABC-type multidrug transporter, ATP-binding protein TERM 650 523661 - 523677 + G 95 -6.5 -5.30616 | overlap 523662 AAGCCTCGCCCATTA TGCACCG TCG TGGTGCG TTTTTCTTTCCCTGC TERM 651 523723 - 523738 + G 71 -6 -4.2828 | opp_overlap 523723 523722, overlap 523695 CGTCAATATAAAGAC GCGCCG CTAA CTGCGC TTTTCCTCGCTCGCC SeD_A0505 523660 - 523788 + | hypothetical protein SeD_A0506 523839 - 524177 + | nitrogen regulatory protein P-II TERM 652 524650 - 524662 + G 80 -5.5 -4.93898 | GAGCGTATTCGTTTT TCGGC GGT GCTGA TTTTTGTCGTGGTGT nrgA 524209 - 525495 + | ammonium transporter nrgA tesB 526455 - 525595 - | acyl-CoA thioesterase II TERM 653 526074 - 526097 + g 85 -4.4 -5.27779 | overlap 526078 CTGACGGTAGTCCTT CCGGCCCGAC TGCT GTCGGCATGG TTTTTTGATGTTCAA TERM 654 526554 - 526540 - H 72 -5.7 -4.38712 | CCGATGGGTACAAAA GTCTG AATAA CAGAC CAATTCCAGGCAAAA SeD_A0509 526670 - 527239 + | putative lipoprotein TERM 655 527251 - 527271 + T 100 -16.9 -3.14132 | opp_overlap 527241 527240 TTAATCCTGCGCCAA CCCTCTCCG TTA CGGAGAGGG TTAATACACCCAGCG SeD_A0510 527661 - 527272 - | methylated-DNA-[protein]-cysteine S-methyltransferase SeD_A0512 529442 - 527892 - | cyclic diguanylate phosphodiesterase (EAL) domain protein TERM 656 528435 - 528460 + g 80 -8.9 -4.15044 | GGTGTCGATGATTAG CCGGGTTAGCG GCTC CGTGAGCCCGG TTTGTTCAGCCAGCG TERM 657 528496 - 528485 - G 74 -3 -4.84359 | opp_overlap 528490 CCAGCGCGATAAAAA TTTC CGGC GAAA GGAAAGTGCCGTCCG rpmE 529667 - 529927 + | ribosomal protein L31 rpmJ 529933 - 530073 + | ribosomal protein L36 TERM 658 530098 - 530121 + T 100 -10.3 -5.4505 | opp_overlap 530098 GGTTCAGGGAAAGCA GTGCGTACC AGGGAG GGTGCGCAC TTTTTTATTACCGGC SeD_A0515 530599 - 530129 - | inner membrane protein YlaC SeD_A0516 531268 - 530717 - | maltose O-acetyltransferase TERM 659 531213 - 531246 + g 100 -3.8 -5.95286 | overlap 531216 TCCTGGCATAAAGTT TCATCGGTCGGGCA ATACAG TGCCCCAGCGATCA TTTTTTGTTTTTCGT SeD_A0517 531665 - 531447 - | haemolysin expression modulating protein SeD_A0518 532067 - 531693 - | hypothetical protein TERM 660 532529 - 532544 + r 82 -11.8 -3.30124 | opp_overlap 532529 TTTTTGCGTAAAAAA GGCCGC TTGC GCGGCC TTATCAACAGTGAGC TERM 661 532544 - 532529 - R 100 -11.8 -5.00616 | opp_overlap 532529 TTTTTGCGTAAAAAA GGCCGC TTGC GCGGCC TTATCAACAGTGAGC acrB 535712 - 532563 - | acriflavine resistance protein B TERM 662 533493 - 533507 + g 76 -5.6 -4.77438 | opp_overlap 533492 GTCGCTAATAGACAC GCCCAG CGC CTGAGC TTTTTCCTGGTCGAT TERM 663 535586 - 535625 + g 74 -10.8 -3.57144 | overlap 535587 TTGCGGAGATCGTCA CTGCTGGTGGCGCAAT CGTCGGAT ATTGCGCTACCGGCAA TTTGAGGATCGCGAG TERM 664 535587 - 535624 + g 83 -14.3 -2.74144 | overlap 535586 TGCGGAGATCGTCAC TGCTGGTGGCGCAAT CGTCGGAT ATTGCGCTACCGGCA ATTTGAGGATCGCGA acrA 536928 - 535735 - | acriflavine resistance protein A TERM 665 536899 - 536917 + g 90 -6 -5.17744 | opp_overlap 536895 CATCAGAACGACCGC CAGAGG CGTTAAC CCTCTG TTTTTGTTCATATGT TERM 666 537660 - 537640 - g 70 -3.1 -4.8236 | overlap 537642 GATTTAAAAAAAGAA GCTCGCGCC TAC GTCACGATC CTGCTGGAGATGTAT acrR 537070 - 537723 + | transcriptional regulator AcrR TERM 667 537729 - 537749 + F 72 -4.8 -4.61868 | gap 1, opp_overlap 537729 537727 537730, overlap 537729 537730 CTCCCCCTGATAATA T-TCCAGGA AAAC TCCTGGACA TTTTCTGTGTCGCTA TERM 668 538658 - 538644 - g 90 -5.6 -5.15969 | opp_overlap 538644 538645, overlap 538645 CGCTAACGGAAAAAA CGGCCC AGG AGGCCA TTTCGCCGGACGAAA TERM 669 539143 - 539126 - g 70 -5.5 -4.47183 | GATCAGCTAAATAAA CAGTTGG GTAA CCAGCTG ATGATGGCGATTAAC TERM 670 539212 - 539225 + G 74 -2.4 -5.08824 | opp_overlap 539207 AAATCTGAAAGCCAT TCTG ACGCAG CAGA TTTTTTGGGTGAACA SeD_A0522 537848 - 541204 + | potassium efflux system KefA SeD_A0523 542181 - 541246 - | hypothetical protein TERM 671 541362 - 541389 + g 91 -9.8 -4.57341 | overlap 541354 541385 541386 GCGCTTCGGCCTCTC GGCCTTGTGCTA ACCC TTGCTCAAGGCC TTTTTGCAGGCCCTT TERM 672 541504 - 541522 + g 71 -8 -3.8901 | opp_overlap 541503 CAGTTGACGAATTAG CGCCCCGG GTT CTGCGGCG TTTCCTGCTTTCAAC SeD_A0524 542418 - 542251 - | hypothetical protein SeD_A0525 542959 - 542432 - | primosomal replication protein N'' SeD_A0526 543028 - 543405 + | inner membrane protein YbaN TERM 673 543410 - 543399 - f 71 -3.6 -4.89562 | TGAAAAGCAACAAAA GCGC TGAA GCAC ACGAATCGCTGTTGC apt 543558 - 544109 + | adenine phosphoribosyltransferase TERM 674 544146 - 544170 + F 100 -16.5 -3.09671 | opp_overlap 544146 544149, overlap 544149 TTTTAGCCAGAGAGA CAACCTCGCTG TAT CGGCGAGGTTG TGTTAGCATTACCCT TERM 675 544170 - 544146 - f 88 -14.3 -3.0094 | opp_overlap 544146 544149, overlap 544149 TTTTAGCCAGAGAGA CAACCTCGCTG TAT CGGCGAGGTTG TGTTAGCATTACCCT TERM 676 544167 - 544149 - f 79 -10.2 -3.64912 | opp_overlap 544149 544146, overlap 544146 TAGCCAGAGAGACAA CCTCGCTG TAT CGGCGAGG TTGTGTTAGCATTAC TERM 677 544149 - 544167 + F 93 -12.4 -3.69069 | opp_overlap 544146 544149, overlap 544146 TAGCCAGAGAGACAA CCTCGCTG TAT CGGCGAGG TTGTGTTAGCATTAC TERM 678 545543 - 545516 - g 75 -11.2 -3.37016 | gap 1, opp_overlap 545518, overlap 545511 ACAAAAAAGAGTGAA CCGGCAGC-CGCA TCC CGCGCGCGGCCGG TGAATAACTCTGCGC TERM 679 545749 - 545736 - g 90 -5.2 -5.1861 | overlap 545737 TGGAGCATGAAAAAA CGCC GGAGCT GGCG GCTAAACTGGCGGCG TERM 680 545950 - 545932 - g 74 -6.7 -4.25104 | gap 1 CGGCGCGCAGCAAAA GCTG-GCG CAAG CGCTCAGC GATCTGACGGGAACG TERM 681 546067 - 546050 - g 74 -6.9 -4.24075 | opp_overlap 546050 546047 ATTTATGAAGAGAAA CTCGCGC AAGC GCGTGAG TCAATTATTGCGGAT TERM 682 546128 - 546088 - g 73 -9 -3.7941 | gap 1, opp_overlap 546091 TATTGCGGATAATAA CATTCAGACGCTGCGTCGA TTCT TCGACGCCGAG-CTGGATG AAGAGAGTATCCGCC dnaX 544223 - 546151 + | DNA polymerase III, tau subunit TERM 683 546152 - 546170 + F 73 -9.6 -3.30124 | ATCCGCCCCATTTGA TCGTAAGC CTG GCTTGCGA TTGTGAACCATCAAG TERM 684 546270 - 546258 - g 79 -3.4 -5.17353 | AGATGCAGGAAAAAA TGCA GAAAA TGCA GGAAGAGATTGCGCA SeD_A0530 546197 - 546526 + | conserved hypothetical protein TIGR00103 TERM 685 546946 - 546935 - g 85 -4.4 -5.24129 | overlap 546936 546938 546939 TGGCGTCAGAAAAAA TCAG CGAG CTGA TCCTCGCGACCAACC recR 546526 - 547131 + | recombination protein RecR TERM 686 547160 - 547137 - f 100 -13.8 -4.1552 | TATTTTCTGAACAAA CGGAGGCGGC ATTC GCGGCCTCCG CTTGAAATCACACCC htpG 547242 - 549116 + | chaperone protein HtpG TERM 687 549303 - 549331 + G 95 -5.2 -5.31877 | gap 1, opp_overlap 549270 549314, overlap 549304 CGAGTACTGTTTGTA GGCCGGATAAGCG CCAG CGCC-ATCCGGCA TTTTTTATAATACCT TERM 688 549304 - 549330 + G 73 -8.7 -3.78042 | gap 1, opp_overlap 549270 549314, overlap 549303 GAGTACTGTTTGTAG GCCGGATAAGCG CCAG CGCC-ATCCGGC ATTTTTTATAATACC SeD_A0533 549204 - 549341 + | hypothetical protein adk 549474 - 550118 + | adenylate kinase TERM 689 550178 - 550136 - f 88 -14.3 -3.05384 | overlap 550176 TTTTCGCGTAGTGAA CCGCTTATCAGGCCTGC CATTATCCC GCAAGCCTGATAAGCGT AGCGCCATCAGGCAA SeD_A0535 550197 - 550337 + | hypothetical protein TERM 690 551277 - 551232 - g 74 -2.5 -5.00616 | opp_overlap 551238 551241, overlap 551235 GCGGGCGGTAAAAAA TATGCGTACATTCCGGCGCTG AACG CGACGCCGGAACATATTGATA TGATGCTGAAACTCA hemH 550347 - 551309 + | ferrochelatase SeD_A0537 552277 - 551306 - | acetyl esterase TERM 691 552332 - 552314 - H 70 -2.3 -5.07053 | AACCATTGTAAAAAA CGCGGCT GGAGA AACTGCG ATCTCGTCGTCCGAT gsk 552430 - 553734 + | inosine kinase SeD_A0539 555459 - 553783 - | inner membrane protein YbaL TERM 692 554427 - 554416 - G 77 -7.2 -4.30719 | opp_overlap 554403, overlap 554417 TCCGGCGAGAATAAA GGCG AACT CGCC GATTTGCGCCAGGCT TERM 693 554628 - 554608 - G 89 -3.1 -5.67283 | opp_overlap 554622 554623, overlap 554611 554620 554621 AACGGAAACAAAAAA CAGGACGGC AAA GGCGTCGCG CAGCGGCAACGTATC TERM 694 554911 - 554928 + g 73 -5.5 -4.58395 | ATCGACTGTCAGCGA GGCTATG CCGA CATCGCC TTTTTCCACCATGCC TERM 695 555200 - 555144 - G 71 -10 -3.56092 | gap 1, overlap 555145 CCAGCACGGCGGAAA GCGCCATACCCAGCAGCGTCGCCACCG CTAT CTG-AGCGACAGCGCCGGGAATGGCGA TAGACTTTACCGCCA TERM 696 555199 - 555145 - G 79 -13.5 -2.73441 | gap 1, overlap 555144 CAGCACGGCGGAAAG CGCCATACCCAGCAGCGTCGCCACCG CTAT CTG-AGCGACAGCGCCGGGAATGGCG ATAGACTTTACCGCC SeD_A0540 555537 - 555662 + | hypothetical protein fsr 556894 - 555674 - | fosmidomycin resistance protein TERM 697 556245 - 556255 + g 74 -6.8 -4.30448 | CGCGGCAGCGGGTTA GCGA TTA TCGC TTTTGGCTTGCCTTT TERM 698 558077 - 558056 - g 95 -9.5 -4.6902 | gap 1, overlap 558059 GGATAACGGGAAAAA CGAGCGTGTA CTT TACACGC-CG GAAATCGCCGAAAAT TERM 699 558075 - 558059 - g 71 -10.9 -3.26237 | overlap 558056 TAACGGGAAAAACGA GCGTGTA CTT TACACGC CGGAAATCGCCGAAA TERM 700 558247 - 558265 + G 70 -6.7 -4.15565 | gap 1, overlap 558256 TTCTGGCTGCGCAGA TCGCGCGC ACCG GCGC-CGA TTTTGGCGTGATGAG TERM 701 558439 - 558429 - g 71 -8.2 -3.89956 | GTAGCACAGATGAAA CCGG ACT CCGG CGCCTATCCACAGTT SeD_A0542 557067 - 558719 + | protein UshA ybaK 559315 - 558836 - | YbaK/ebsC protein TERM 702 559051 - 559067 + g 75 -5.8 -4.56597 | opp_overlap 559025 GTTGCGCCACCATCG GGTCGG CCATA TCGACC TTTTTCGCGCCCAGA TERM 703 559490 - 559511 + r 100 -7.3 -5.96894 | overlap 559491 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTATTTCAAT TERM 704 559491 - 559510 + r 87 -10.8 -4.15696 | overlap 559490 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTATTTCAA SeD_A0545 560311 - 559517 - | GumN family protein TERM 705 560370 - 560356 - R 95 -12.8 -4.36914 | opp_overlap 560369 GCGCGTTGGAGAAAA GGGCGC AAT GCGCCC TGACGGGACGTCAAC SeD_A0546 561224 - 560397 - | putative periplasmic protein TERM 706 561265 - 561254 - R 82 -3 -5.48825 | opp_overlap 561254 TATGATTCAAAAAAA CATT ATAA AATG TTGTTTTTTATTTTT TERM 707 561254 - 561265 + r 72 -3 -4.97159 | opp_overlap 561254 TATGATTCAAAAAAA CATT ATAA AATG TTGTTTTTTATTTTT TERM 708 561339 - 561374 + r 93 -9.8 -4.70879 | opp_overlap 561342 561372, overlap 561340 561341 561372 TTACTGATGGCTTAA TAATATATCAGGCAGC TGAT GCTGCCTGATATAGCG TTTTTACGCTTTCGG TERM 709 561340 - 561373 + r 79 -11.1 -3.41804 | opp_overlap 561342 561372, overlap 561339 561341 561372 TACTGATGGCTTAAT AATATATCAGGCAGC TGAT GCTGCCTGATATAGC GTTTTTACGCTTTCG TERM 710 561341 - 561372 + r 86 -14.6 -2.6436 | opp_overlap 561342, overlap 561340 561339 ACTGATGGCTTAATA ATATATCAGGCAGC TGAT GCTGCCTGATATAG CGTTTTTACGCTTTC TERM 711 561371 - 561342 - R 100 -18.1 -3.62597 | opp_overlap 561341 561340 561339 CTGATGGCTTAATAA TATATCAGGCAGC TGAT GCTGCCTGATATA GCGTTTTTACGCTTT SeD_A0547 563879 - 561378 - | copper-translocating P-type ATPase TERM 712 562701 - 562736 + g 74 -4.5 -4.7254 | opp_overlap 562688, overlap 562703 GACGCTGCCGTCCTG GACGACGGTGCCGGC ATGAAC GCTGTCGCCTTCGCC TTTTTGCTGCGGAAT TERM 713 562847 - 562879 + g 76 -3.4 -5.04987 | gap 2, overlap 562862 TAGTGAGTCGCAGTA GCAT-CC-CTGGCTGA ACG TCCGCCAGCGGGACGC TTTTTTCGCCGTCTT TERM 714 563403 - 563414 + g 83 -7.2 -4.57073 | overlap 563357 TTCAATCGCCTCTGC GCCG TAGC CGGC TTTTTCCACCGCCTG TERM 715 564029 - 564017 - g 95 -5.5 -5.40474 | ATGTGGCGAAAAAAA CCGGT TTA ACCAG CAAAGCCATTCGGTT cueR 563989 - 564405 + | Cu(I)-responsive transcriptional regulator SeD_A0549 564858 - 564406 - | inner membrane protein YbbJ SeD_A0550 565772 - 564855 - | band 7 protein SeD_A0551 565919 - 566596 + | ABC transporter, ATP-binding protein SeD_A0552 566583 - 567362 + | hypothetical protein TERM 716 567492 - 567469 - T 73 -9.5 -3.30441 | CAGTAGCGCGTACAA CTGGCGGCG GTATTT CGACGCCAG CGCGTCGCCGGTGCC SeD_A0553 568329 - 567448 - | thioredoxin domain protein SeD_A0554 569132 - 568362 - | oxidoreductase, short chain dehydrogenase/reductase family SeD_A0556 569901 - 569287 - | acyl-CoA thioesterase I SeD_A0555 569872 - 570558 + | lipoprotein-releasing system ATP-binding protein LolD TERM 717 571044 - 571054 + G 70 -6.8 -4.13767 | overlap 571035 571034 CAGGAGCCGGATTCC GGGT TTA ACCC TTTTCAGATGGCGCC TERM 718 571122 - 571105 - g 77 -4.1 -5.03314 | gap 1, opp_overlap 571120 CCGATGTGGAAAAAA CCGG-TGC GAT ACAGCCGG GGAGCCGCGTGATGT TERM 719 571274 - 571290 + G 70 -8.7 -3.64049 | overlap 571262 571285 571286 ATCGCTCGAACGTTC GCAGCAG TTT TTGCTGC TTTCGGCGTTATTAA SeD_A0557 570555 - 572969 + | efflux ABC transporter, permease protein TERM 720 572986 - 573015 + F 85 -6.3 -5.14563 | opp_overlap 572986 572987, overlap 572987 572989 TCATGATGTGAATAA TTTCGCGCCGGTT TTTA AAACGGCGCGTAC TTTTTTAGTCGCACA TERM 721 572987 - 573014 + F 79 -9.8 -3.68256 | opp_overlap 572987 572986, overlap 572986 572989 CATGATGTGAATAAT TTCGCGCCGGTT TTTA AAACGGCGCGTA CTTTTTTAGTCGCAC TERM 722 572989 - 573012 + F 85 -12.4 -3.41701 | opp_overlap 572987 572986, overlap 572987 572986 TGATGTGAATAATTT CGCGCCGGTT TTTA AAACGGCGCG TACTTTTTTAGTCGC SeD_A0558 573155 - 574288 + | outer membrane protein TERM 723 575242 - 575224 - g 71 -7.4 -3.95535 | overlap 575222 AGAATCTGAAAAATA TCATTGCG GTA CGCAGTGA AGATGCCGATAAGCC SeD_A0559 574545 - 575375 + | lipoprotein TERM 724 575495 - 575511 + G 81 -6.5 -4.6902 | overlap 575497 TGATGTGAGCCTGCA TATCGCC GCG GGCGAGA TTTTTGGCATTGTCG TERM 725 576382 - 576356 - g 71 -10.2 -3.29043 | gap 1, overlap 576361 AACCGCGCCGCATAA TCCAACGGCGG TGGCCG CCGCCG-TGGA GCATATCCGTCAACG TERM 726 576375 - 576361 - g 83 -12.8 -3.23274 | overlap 576356 CGCCGCATAATCCAA CGGCGG TGG CCGCCG CCGTGGAGCATATCC SeD_A0560 575412 - 576428 + | methionine import ATP-binding protein MetN 2 TERM 727 576502 - 576521 + G 70 -3.4 -4.73912 | overlap 576506 576518 ACGGTGCTGGCGATT CTTGGCGG TCTA CCGCTCGG TTTTCTGATTTTTGT TERM 728 576518 - 576529 + G 72 -2.2 -4.83615 | overlap 576502 TTGGCGGTCTACCGC TCGG TTTT CTGA TTTTTGTCACCGATC TERM 729 576550 - 576566 + G 82 -5.1 -5.06016 | overlap 576552 GTCACCGATCGTCAT CTGTTCT GGC AGAACCG TTTTATTTATCTCGT TERM 730 576681 - 576723 + G 100 -13.3 -4.3739 | overlap 576683 GGGCAATACGATTGG CCCGATTGCAGCCTCCGTC CCGCT GTCGGTGGCCGCAATCGCG TTTTATGCACGCCTG TERM 731 576683 - 576721 + G 81 -14.5 -2.52946 | overlap 576681 GCAATACGATTGGCC CGATTGCAGCCTCCGTC CCGCT GTCGGTGGCCGCAATCG CGTTTTATGCACGCC SeD_A0561 576421 - 577080 + | ABC transporter integral membrane protein ybbB 578213 - 577119 - | tRNA 2-selenouridine synthase TERM 732 577158 - 577181 + g 100 -11 -5.27923 | AACGTCTTGCCATGG GCCGCGAAAA ACGA TATTCGCGGC TTTTTTCTCCAGTTG SeD_A0563 579209 - 578283 - | HTH-type transcriptional activator AllS allA 579436 - 579918 + | ureidoglycolate hydrolase TERM 733 579943 - 579957 + F 71 -7.2 -4.12254 | opp_overlap 579943 579941 CCTTCTTGCATAAGA TGAACA TAT TGTTCA TTGTTTATGCTCATA allR 579997 - 580815 + | transcriptional regulator AllR TERM 734 580821 - 580842 + F 100 -10.1 -5.16472 | overlap 580822 TGTAGCCTGAGCCGC ATCCCGCTC GCTG GAGCGGGAC TTTTTTAAAATTTTT TERM 735 580822 - 580841 + F 100 -13.6 -3.67443 | overlap 580821 GTAGCCTGAGCCGCA TCCCGCTC GCTG GAGCGGGA CTTTTTTAAAATTTT gcl 580900 - 582681 + | glyoxylate carboligase hyi 582694 - 583470 + | hydroxypyruvate isomerase TERM 736 584054 - 584035 - g 74 -2 -5.0133 | overlap 584037 584038 CATCCTGGGAAAAAA TATCACCC TGGT GGGCGGCA ATGGGGATGGGCAAA SeD_A0568 583571 - 584449 + | 2-hydroxy-3-oxopropionate reductase TERM 737 584455 - 584480 + F 78 -11.9 -3.01712 | opp_overlap 584453 ATTGTCCTAATTATG TGTATCGCTGC GGCT GCAGCGATACC TGTTCACAAGGAACA TERM 738 585752 - 585736 - g 76 -2.9 -5.01422 | overlap 585741 TTATATAAAAAGAAA GCAACGC AAC GTATTGC TTCAGCTTAAAAATA SeD_A0569 584515 - 585762 + | major facilitator family transporter SeD_A0570 585858 - 587312 + | permease, cytosine/purine, uracil, thiamine, allantoin family TERM 739 587494 - 587479 - g 75 -6.1 -4.58395 | TCCAGGGCGGAAAAA TCGCC GCGATT GGCGA GAACCTGGGGGAAGC TERM 740 587749 - 587764 + G 71 -6 -4.24422 | opp_overlap 587740 AATTGACCATCGACG CCGCGC AGTT GGGCGG TTTGGTTTCTTATAA TERM 741 588006 - 587994 - g 73 -9.1 -3.78329 | GGCGAGGAAGCTAAA CGCGA AGG TCGCG TAACGGCGCATGATT TERM 742 588478 - 588501 + G 70 -3 -4.8048 | opp_overlap 588481 588482, overlap 588481 CGATGTTTGGCAAAT TAATGGCGAC CAAC GCCGCCGATA TTTTTGGTCTGAAAC allB 587391 - 588752 + | allantoinase TERM 743 588788 - 588768 - f 100 -16.9 -3.05384 | opp_overlap 588761 588768 TCCGGTGTGATTTAA TGCCCGTCG TCA CGACGGGCA TTCTCTATTTTAAGG TERM 744 588768 - 588788 + F 100 -16.9 -3.83378 | opp_overlap 588768, overlap 588761 TCCGGTGTGATTTAA TGCCCGTCG TCA CGACGGGCA TTCTCTATTTTAAGG TERM 745 588979 - 588993 + G 83 -10 -4.08767 | ACCACCGCGTTGGCC TGCCTG GTT CAGGCA TTTTGCGGCCATCGC SeD_A0572 588811 - 590109 + | putative purine permease YbbY SeD_A0573 590132 - 591280 + | glycerate kinase 1 TERM 746 591311 - 591292 - T 100 -13.6 -5.71983 | TTAAGCATAAAAAAA GCCACGGT TCTC ACCGTGGC AAAATCCAACATAGC SeD_A0574 592145 - 591360 - | putative allantoin catabolism protein allC 593391 - 592156 - | allantoate amidohydrolase allD 594462 - 593413 - | ureidoglycolate dehydrogenase TERM 747 593839 - 593851 + g 70 -3.3 -4.82901 | GGCAAAAGGATCATG TGTCG GCG CGCCA TTTTTATCAACGGCC TERM 748 595547 - 595535 - g 70 -9.1 -3.73042 | opp_overlap 595534 595535, overlap 595533 GCGCGGATGAAAAGA GCCAG GTG CTGGC CTTTGTCTCCAAACC SeD_A0577 594778 - 596442 + | protein FdrA TERM 749 597177 - 597202 + G 71 -11.8 -2.52623 | opp_overlap 597167, overlap 597176 597174 TAAAGCCGCCATGGA TGCGGGCGCG CAGATT CGCGCCGGCA GTATTGTGACGGCGA SeD_A0578 596452 - 597711 + | hypothetical protein SeD_A0579 597744 - 598532 + | putative cytoplasmic protein arcC 598536 - 599429 + | carbamate kinase TERM 750 599431 - 599468 + T 75 -6.3 -4.46233 | gap 3, opp_overlap 599454, overlap 599432 GCATCCGTCTGTGAT C-GCGACGGGCGGCGACA GAGAA TG-CGCCGCCCA-CGCTG TTTATTTAAGCTTAC TERM 751 599432 - 599466 + T 79 -10 -3.8323 | gap 2, opp_overlap 599454, overlap 599431 CATCCGTCTGTGATC GCGACGGGCGGCGACA GAGAA TG-CGCCGCCCA-CGC TGTTTATTTAAGCTT purK 600537 - 599470 - | phosphoribosylaminoimidazole carboxylase, ATPase subunit TERM 752 600268 - 600285 + g 72 -2 -4.96848 | CGCGGTCGCGAGTCC CAGTTT ATCGAA AAGCTG TTTTTGTGTCAGACG purE 601043 - 600534 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit lpxH 601883 - 601161 - | UDP-2,3-diacylglucosamine hydrolase TERM 753 601315 - 601328 + g 74 -4.5 -4.81249 | overlap 601303 TGACCGTGAATCAGC CACTG TACG CGGTG TTTTTCCATTTCGGC TERM 754 601846 - 601813 - G 100 -11.1 -5.03314 | gap 1, opp_overlap 601822, overlap 601815 601822 TCTACGGCTAAAAAA CGCAGAAAACCGGCGA CGA TCGCCGGTTCT-TCCG TTTGCAGATGCAAGT TERM 755 601846 - 601815 - G 83 -14.6 -2.76422 | gap 1, opp_overlap 601822, overlap 601813 601822 TACGGCTAAAAAACG CAGAA-AACCGGCGA CGA TCGCCGGTTCTTCCG TTTGCAGATGCAAGT TERM 756 601838 - 601822 - G 100 -13.7 -4.58242 | opp_overlap 601822, overlap 601813 601815 AAAAAACGCAGAAAA CCGGCGA CGA TCGCCGG TTCTTCCGTTTGCAG TERM 757 601822 - 601838 + g 93 -13.7 -3.77832 | opp_overlap 601822 601813 601815 AAAAAACGCAGAAAA CCGGCGA CGA TCGCCGG TTCTTCCGTTTGCAG ppiB 602380 - 601886 - | peptidylprolyl isomerase TERM 758 602137 - 602147 + g 73 -5.4 -4.58283 | GCGCCATTGCCAGCG TACC ACG GGTA TTTTTCAGACCATTG cysS 602553 - 603938 + | cysteinyl tRNA synthetase TERM 759 603948 - 603977 + T 100 -15.1 -6.28401 | AAGTAAGCGCTTTTA CAGGCCGCTCTAT TTGC ATAGAACGGCCTG TTTTTTTATTTTTTC SeD_A0586 604807 - 603983 - | putative outer membrane protein SeD_A0587 605241 - 604804 - | putative inner membrane protein TERM 760 604861 - 604881 + g 82 -5.3 -5.0538 | opp_overlap 604862, overlap 604863 GTCCTGATTTACCAT ATGGGCAAG GAC CTTGCCCTC TTTTTTCAAATAAGC TERM 761 604863 - 604879 + g 91 -12.3 -4.15748 | opp_overlap 604862, overlap 604861 CCTGATTTACCATAT GGGCAAG GAC CTTGCCC TCTTTTTTCAAATAA TERM 762 604896 - 604913 + g 77 -4 -5.02074 | opp_overlap 604896 CTTTTTTCAAATAAG CGCCGG TGCCTT CCTGCG TTTTTTCCAGAGTGA SeD_A0588 605779 - 605234 - | inner membrane protein YbcI TERM 763 605866 - 605900 + r 75 -10.1 -3.48276 | gap 2, opp_overlap 605857 605855 605866 605876, overlap 605866 AAGACAGCGTAATCA G-GCCGGATA-AGACGC TTT GCGTCGCTATCCGGCAC TTGTATCAGGCCACG TERM 764 605866 - 605899 + r 71 -10.3 -2.68823 | gap 1, opp_overlap 605857 605855 605866 605876, overlap 605866 AAGACAGCGTAATCA GGCCGGATA-AGACGC TTT GCGTCGCTATCCGGCA CTTGTATCAGGCCAC TERM 765 605899 - 605866 - R 78 -12.5 -2.75307 | gap 1, opp_overlap 605866 605866, overlap 605857 605855 605876 AAGACAGCGTAATCA GGCCGGATAA-GACGC TTT GCGTCGCTATCCGGCA CTTGTATCAGGCCAC TERM 766 605888 - 605876 - R 70 -9.1 -3.30619 | opp_overlap 605866 605866, overlap 605866 605857 605855 AATCAGGCCGGATAA GACGC TTT GCGTC GCTATCCGGCACTTG SeD_A0589 606118 - 605906 - | hypothetical protein folD 606986 - 606120 - | methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase TERM 767 606151 - 606165 + g 70 -7.1 -4.18494 | opp_overlap 606149 606153 TCGTGATATTCAATG CACGC CTGCA GCGTG TTTTCGATAAGCGTG TERM 768 606552 - 606524 - G 74 -11.2 -3.18264 | overlap 606542 GGCCGTAGGTATCAA TATTGTAACGCT CAAGC AGCGTCACAATA CCGCGGGGCGTACAG TERM 769 607806 - 607822 + G 74 -7.9 -4.08706 | opp_overlap 607800 607801, overlap 607801 GATCCGAAAGTGGCG GCCACCG CTG CCGTGGC TTTCTCTGGTCAGGC SeD_A0591 607533 - 608090 + | type-1 fimbrial protein, A chain TERM 770 608616 - 608631 + F 71 -10.4 -2.72829 | overlap 608615 GACTTTGCATTTTAC TGCCCG CTAT CGGGCA ATTTCAGAAAATATG SeD_A0594 608741 - 609433 + | chaperone protein FimC TERM 771 609614 - 609624 + G 70 -6.8 -4.11295 | overlap 609609 609620 TCGGCGGATACCGCG TCCG TGG CGGA TTTATCTCGCTTTGA SeD_A0595 609464 - 612076 + | outer membrane usher protein SfmD SeD_A0596 612091 - 613098 + | mannose binding protein FimH SeD_A0597 613108 - 613626 + | major fimbrial subunit SeD_A0598 614304 - 613672 - | fimbriae Z protein TERM 772 613786 - 613796 + g 73 -5.4 -4.67607 | opp_overlap 613786 GTTACTCAATAAAAG TTGC TCG GCAA TTTCTTTGTTAGACA SeD_A0599 615630 - 614908 - | fimbriae Y protein SeD_A0600 615743 - 615591 - | hypothetical protein TERM 773 615730 - 615716 - GR 71 -4.2 -4.63527 | opp_overlap 615716 GCACCAGCGTAAAAA GCAATG CTT CGTTGC TCTGATGTTTCAATG SeD_A0601 616717 - 616121 - | fimbriae W protein TERM 774 616607 - 616636 + g 88 -13.7 -3.33696 | overlap 616601 ATTATCTATCTCTTC TGGCGGCAGAAAG TCAA TTTTCTGCTGCCA TTGATTCGCCAGACG SeD_A0603 618227 - 617064 - | prophage DLP12 integrase TERM 775 618835 - 618822 - R 100 -9.5 -5.4505 | opp_overlap 618821 618822 618826, overlap 618824 GTCTCCAATAAAAAA CCGCC ATCA GGCGG CTTGGTGTTCTTTCA SeD_A0604 619190 - 618879 - | hypothetical protein TERM 776 619213 - 619200 - R 100 -8.1 -5.18371 | opp_overlap 619200 CTCCATAAAACAAAA CTCGC CGTA GCGAG TTCATATAAAATAAA TERM 777 619246 - 619229 - R 93 -9.1 -4.83243 | opp_overlap 619229 TTCATATAAAATAAA TCCCCGC GAGT GCGAGGA TTGTTAGTTGCGCTC SeD_A0605 619553 - 619272 - | hypothetical protein SeD_A0606 620628 - 619546 - | Eaa protein SeD_A0607 620918 - 620625 - | Gp43 SeD_A0608 621884 - 621303 - | Eae protein SeD_A0609 622051 - 621881 - | hypothetical protein SeD_A0610 622355 - 622062 - | anti-RecBCD protein 2 TERM 778 622313 - 622285 - G 71 -11.7 -2.52464 | TTTTTTCTGAATTTA TCCAGCACCTCCG AGA CGGAATTGCCGGA ACAGCGGCGCGGGTC SeD_A0611 623434 - 622928 - | single-stranded DNA-binding protein SeD_A0612 624142 - 623435 - | gp49 SeD_A0613 624339 - 624151 - | hypothetical protein TERM 779 624672 - 624652 - R 95 -7.5 -5.44119 | GGTATGCGAAAAAAA GCCGCCC TGACTGC GAGCGGC AAGACTATCAAGGGA SeD_A0615 624906 - 624781 - | hypothetical protein SeD_A0616 625311 - 625165 - | hypothetical protein TERM 780 625254 - 625237 - G 85 -6.9 -4.87389 | opp_overlap 625237 625246 TATGCCAAAAATAAA GGCCACC ATCA GGCAGCC TTGTTTTTCTGTTTG TERM 781 625246 - 625257 + g 78 -2.2 -5.19879 | opp_overlap 625237, overlap 625237 AATAAAGGCCACCAT CAGG CAGC CTTG TTTTTCTGTTTGCCA SeD_A0617 625856 - 625524 - | gp54 SeD_A0618 625876 - 626073 + | hypothetical protein SeD_A0619 626220 - 626429 + | hypothetical protein TERM 782 626458 - 626441 - T 100 -9.8 -5.10933 | opp_overlap 626440 626439 GTAGGGAAAAGAAAA CCCGGC GCTGTG GCCGGG CGTTGATCAATTCTT SeD_A0620 627388 - 626465 - | hypothetical protein SeD_A0622 628311 - 628192 - | hypothetical protein SeD_A0621 628305 - 628421 + | hypothetical protein TERM 783 628880 - 628852 - g 100 -11.8 -5.54907 | opp_overlap 628851 CTGACAAAAGAAAAA GCCCCGAAGAAC GGCGA ATTCTTCGAGGC CTGATGTAGAAAGAC SeD_A0623 628765 - 628884 + | transcriptional activator-regulatory protein SeD_A0624 629058 - 629891 + | DNA replication protein gp18 SeD_A0625 629888 - 631264 + | replicative DNA helicase TERM 784 631291 - 631312 + F 100 -8.7 -5.27335 | gap 1, opp_overlap 631291 ACTGAGCTTGTAACA GGCCTGCTGG TAA TC-GCAGGCC TTTTTATTTGGGGGA SeD_A0626 631320 - 631778 + | putative ninB protein TERM 785 632088 - 632075 - g 70 -6.7 -4.17556 | GACATGGTTAAGAAA TACGG CACT CCGTA TGTCGGCGGCGCGTT SeD_A0627 631775 - 632647 + | phosphoadenosine phosphosulfate reductase family protein SeD_A0628 632963 - 633139 + | hypothetical protein SeD_A0629 634411 - 634548 + | gp23 TERM 786 634615 - 634628 + F 89 -5.9 -5.63517 | GTTAGTGAGTCTTAA GTCGC TGCG GCGGC TTTTTTATTTGCACG TERM 787 634758 - 634741 - f 100 -8.4 -5.23292 | opp_overlap 634740 TTACACAAAAGAAAA CCCAGC GCTATG GCTGGG ATTCGTGAAAATGGG SeD_A0630 634928 - 635254 + | phage holin, lambda family SeD_A0631 635238 - 635675 + | phage lysozyme SeD_A0632 635672 - 636142 + | bacteriophage lysis protein TERM 788 636184 - 636202 + T 100 -8.8 -4.96848 | opp_overlap 636184 TGACTTTCATGAAAA TGCCTCGT AAT GCGGGGCA TTTTTATATCCGCAG SeD_A0633 636502 - 636377 - | hypothetical protein SeD_A0634 636604 - 636885 + | hypothetical protein TERM 789 637042 - 637082 + F 77 -10.5 -3.32844 | opp_overlap 637035 637055 GATGGAAAGACATCG GTTATTGCAGAGACCATTC AAT GAGTGGTCTCGACAATGGC TTATGCCCTACACGG SeD_A0636 637822 - 637944 + | hypothetical protein SeD_A0637 638187 - 638675 + | terminase small subunit TERM 790 640143 - 640115 - g 90 -4.5 -5.34857 | CGAAAGAAAAGAAAA TCCCCGCACCGAT TAG ACCAGTACGCAGA GGACGATAATGGCCG SeD_A0638 638653 - 640152 + | terminase large subunit SeD_A0639 640152 - 642329 + | portal protein SeD_A0640 642343 - 643254 + | scaffolding protein SeD_A0641 643254 - 644546 + | coat protein TERM 791 644553 - 644566 + F 93 -9.5 -4.57581 | opp_overlap 644551 644553 ACTGCGTAACTAACA GGGGC TTCG GCCCC TTTCTTATTTGAGGT TERM 792 644566 - 644553 - f 71 -9.5 -3.24032 | opp_overlap 644553, overlap 644551 ACTGCGTAACTAACA GGGGC TTCG GCCCC TTTCTTATTTGAGGT SeD_A0642 644587 - 645147 + | hypothetical protein SeD_A0643 645131 - 645631 + | Gp4 SeD_A0644 645591 - 647009 + | gp10 SeD_A0645 647013 - 647714 + | gp26 SeD_A0646 647714 - 648169 + | hypothetical protein SeD_A0647 648172 - 648861 + | DNA transfer protein SeD_A0648 648872 - 650176 + | hypothetical protein TERM 793 650749 - 650759 + G 70 -6.8 -4.11404 | GCCATCAACCTTGGC GCTC AGG GAGC TTTATCTGCTGTAGC TERM 794 651694 - 651680 - g 82 -5.6 -5.02476 | opp_overlap 651679 AGATTGCTGAAAAAA CTGGCG ATT CTCCAG CTAAGTTCATAACCG SeD_A0649 650176 - 652089 + | TPA: injection protein SeD_A0650 652436 - 652107 - | hypothetical protein TERM 795 652144 - 652163 + g 79 -7.2 -4.39426 | overlap 652146 GCTGCAATTATTCCT TTTCCTGA TGTT TCAGGAGA TTTTGTAGCCATATA TERM 796 652504 - 652530 + r 79 -9.4 -4.02581 | opp_overlap 652502 ACGTACCAAAGATGC TCGTTCCGCTCT TTG AGAGCGGTACAA TTGTGTTTTGTAGAG TERM 797 652838 - 652823 - R 88 -8.2 -4.84527 | opp_overlap 652823 652819 GCGACATATCAAAAA GCCGGA GTGA CCCGGC TTGATTATTACTTTT SeD_A0651 653025 - 652846 - | hypothetical protein TERM 798 653137 - 653114 - R 76 -5.2 -4.81851 | opp_overlap 653118, overlap 653118 AGGTAAATGCAAAAA TTAACCCACC GTCA GGTGGGTTTT TTGTACAAACTCTTC TERM 799 653118 - 653133 + r 100 -10.4 -5.24531 | opp_overlap 653114 653118 AAATGCAAAAATTAA CCCACC GTCA GGTGGG TTTTTTGTACAAACT TERM 800 653133 - 653118 - R 84 -10.4 -3.85552 | opp_overlap 653118, overlap 653114 AAATGCAAAAATTAA CCCACC GTCA GGTGGG TTTTTTGTACAAACT SeD_A0652 653376 - 653125 - | Mnt TERM 801 653310 - 653320 + g 78 -6.8 -4.62054 | CATTCGATTTAGCTC GCTG TTT CAGC TTTTCCTTTAATTCG TERM 802 653456 - 653438 - H 77 -10.4 -3.35679 | opp_overlap 653441, overlap 653441 TGGTTGTATCCACAA TAAGACCA CCG TGGTCTTA ATGACGCATTGCCGT TERM 803 653465 - 653487 + H 82 -12 -3.39142 | opp_overlap 653461 GGTCTTAATGACGCA TTGCCGTAGC CAC GCTGCGGCGA TTCCTTGCATCTGGA TERM 804 654076 - 654091 + G 72 -3.9 -4.82901 | opp_overlap 654067, overlap 654077 AAATTAGGCAAAGGT TCCCG CATTGC CGGGG TTTTTATGGAAAGCA SeD_A0653 653512 - 655515 + | bifunctional tail protein TERM 805 655551 - 655524 - T 90 -14.4 -3.16177 | opp_overlap 655524 655530, overlap 655530 ACTTTAGATATGTAA TAAAAATGGGTG TAAA CACCCATTTTTA TTTTATGGTAAATGT TERM 806 655524 - 655551 + T 100 -14.4 -4.48072 | opp_overlap 655524 655530, overlap 655530 ACTTTAGATATGTAA TAAAAATGGGTG TAAA CACCCATTTTTA TTTTATGGTAAATGT TERM 807 655530 - 655545 + T 100 -9 -5.56263 | opp_overlap 655524 655530, overlap 655524 GATATGTAATAAAAA TGGGTG TAAA CACCCA TTTTTATTTTATGGT TERM 808 655545 - 655530 - T 100 -9 -5.12068 | opp_overlap 655530 655524, overlap 655524 GATATGTAATAAAAA TGGGTG TAAA CACCCA TTTTTATTTTATGGT SeD_A0654 657031 - 655574 - | GtrC TERM 809 656115 - 656101 - G 91 -7.2 -4.85599 | opp_overlap 656087 GTGATTTTAGAAAAA TCATTG GTC CAATGA TGAAAAACATTGATG SeD_A0655 657953 - 657021 - | bactoprenol glucosyl transferase SeD_A0656 658312 - 657950 - | bactoprenol-linked glucose translocase TERM 810 658492 - 658529 + r 82 -7.8 -4.58395 | opp_overlap 658496 658500, overlap 658495 GGGACAAAAACGGGA CACACAAAGCTTTGCA TTGGTT TGCAAGGCTTTGCATG TTTTTCGAGGATGGG SeD_A0658 661436 - 659796 - | putative inner membrane protein SeD_A0659 662355 - 661429 - | bactoprenol glucosyl transferase SeD_A0660 662714 - 662352 - | bactoprenol-linked glucose translocase TERM 811 662894 - 662931 + r 82 -7.8 -4.58395 | opp_overlap 662898 662902, overlap 662897 GGGACAAAAACGGGA CACACAAAGCTTTGCA TTGGTT TGCAAGGCTTTGCATG TTTTTCGAGGATGGG SeD_A0661 663384 - 663139 - | copE1 TERM 812 663628 - 663618 - H 73 -2.4 -5.10163 | AATGTCAAAATAAAA CGAG TAG CGCG CGTATCGGAGGTGAC SeD_A0663 664013 - 664201 + | cation efflux system protein CusA TERM 813 664202 - 664250 + T 74 -8.2 -3.96148 | gap 2, opp_overlap 664202 CGCCTTGCGGCATAA CGTGTGC--ACCCCGCCTGCGG CGTCAAA CTGCAGGCGGGTTCAGCGTACG TTTATCGTCCGAGCG SeD_A0664 665106 - 664252 - | transcriptional regulator, AraC family protein TERM 814 664489 - 664470 - G 70 -10 -3.35224 | gap 1, overlap 664468 ACACGTCGCGAAATA GCTGGGCGA AGC TCGCCC-GC GACATGTGTACCCGT SeD_A0665 665322 - 666647 + | probable pyridine nucleotide-disulfide oxidoreductase YkgC TERM 815 666663 - 666679 + F 100 -9.4 -5.83822 | opp_overlap 666660 666663 AACATAAATAATGTA GCCCTG TTAAT CAGGGC TTTTTTTTGCCTGTC TERM 816 666732 - 666707 - f 74 -3.9 -4.95155 | overlap 666709 GTCAGACCATAAAAA TACGCCAGGAC AAAT ATGCTGGCGTC TGAAAGAAAAGGCTT TERM 817 666844 - 666854 + G 81 -8.2 -4.2349 | CTTCATTATTGGCTG CGCC GCT GGCG TTTTCCGTCTCCGCC SeD_A0666 666804 - 667040 + | hypothetical protein SeD_A0667 667053 - 667613 + | hypothetical protein TERM 818 667645 - 667684 + T 77 -10.9 -3.19463 | gap 2, overlap 667651 TTACCCTCTTTATGC CGCGATTCGTCGGGTGGCG CTTG CGCCATCCGAC-AAT-GTG TTGATGAATGATGGA TERM 819 667651 - 667680 + T 90 -14.3 -3.13867 | overlap 667645 TCTTTATGCCGCGAT TCGTCGGGTGGCG CTTG CGCCATCCGACAA TGTGTTGATGAATGA SeD_A0668 668875 - 667700 - | heat shock protein DnaJ domain protein TERM 820 669344 - 669378 + G 78 -7.1 -4.66987 | gap 1, opp_overlap 669364, overlap 669346 CGGACTGTTTCTGGG CA-TCGGCCCGGCGAT TCAA ATGGCGGGGCCGGCTG TTTTGTTGGGCTATG TERM 821 669499 - 669512 + G 75 -3.7 -4.84359 | CCTGGAAATATTGGG GGCCG TTTG CGGGC TTTTTGTCGGGCTGG SeD_A0669 669201 - 670595 + | phenylalanine-specific permease TERM 822 670601 - 670632 + T 90 -16 -2.56596 | opp_overlap 670596, overlap 670597 GGCTCATTAACTTTT TTGCCCGATCCCAT GCTC ATGCGATCGGGCAA TCCATTAATGCCGCA SeD_A0670 671884 - 670637 - | transporter, small conductance mechanosensitive ion channel TERM 823 671021 - 671038 + g 72 -4.1 -4.78107 | gap 1, opp_overlap 671006, overlap 671006 671022 CGGCTTTAACAGTTG C-GCGGTT AAT AGCCGCTG TTTTTCATCATCATC TERM 824 671022 - 671036 + g 71 -7.8 -4.00443 | opp_overlap 671006, overlap 671006 671021 GGCTTTAACAGTTGC GCGGTT AAT AGCCGC TGTTTTTCATCATCA TERM 825 671923 - 671902 - H 71 -8 -3.85698 | opp_overlap 671919 TCTCTCCTTTATAAA CAGCAGCC TATGAT GACTGCTG AATGGCATTTATGCA SeD_A0671 671911 - 672096 + | hypothetical protein TERM 826 672238 - 672254 + T 72 -9.4 -3.53722 | ACGGCATACTCTCGC TGGCGC TGGCC GCGCCA TTATCTGCCTGTGCG TERM 827 673872 - 673850 - T 77 -10.6 -3.3071 | overlap 673851 ATACCAGTACATCAA TGCGTTTTGG CGA CCAAAACGCC CATTCGCAGGTGGGT TERM 828 673871 - 673851 - T 83 -14.1 -2.57944 | overlap 673850 TACCAGTACATCAAT GCGTTTTGG CGA CCAAAACGC CCATTCGCAGGTGGG TERM 829 674239 - 674251 + T 80 -6.9 -4.56607 | opp_overlap 674239 ATCGTAGGCGCAAAC CGGTG TCA CGCCG TTTTCTCCTTCATCC TERM 830 674434 - 674417 - T 100 -12.7 -5.1361 | AGAAAGGTGAAAAAA GCCGGAC GGGC GTCCGGC TTAGGCAGGGGATTA SeD_A0674 675100 - 674447 - | oxygen-insensitive NAD TERM 831 674903 - 674914 + g 71 -5.8 -4.25104 | GTTGAACGTGTAGTT TCCG GCAG CGGA TTTTGCTACGCGCGC SeD_A0675 675565 - 675197 - | hypothetical protein SeD_A0676 676146 - 675565 - | transcriptional regulator, TetR family TERM 832 675654 - 675622 - G 76 -12.1 -3.08813 | gap 1, opp_overlap 675621 675615 675638 TCCCAGCGCAATATA TTCGCCA-GCGCGA GCGGGA TCGCGCGCGGCGAA ATCCATTGTTGTTTC TERM 833 675708 - 675687 - G 72 -2.1 -4.84359 | gap 1, overlap 675688 675689 CCAGCGCCAGAAAAA GGCCGTCGCC GAA GGCG-CGGTA CTCATCCGACATAAA TERM 834 676188 - 676174 - H 80 -7.2 -4.57569 | overlap 676184 676187 TTATGTCTGGAAAAA CATGAT TGA ATCATG CCCGTTGTCGCGTCG TERM 835 676325 - 676313 - H 72 -5.5 -4.4017 | TGAAGTGGTAGAAAA GCCTA TTG CAGGC CATGCGATAAGCCAT TERM 836 676544 - 676558 + G 74 -2.7 -4.85599 | CGGGGTATTCCAAGT GGCAC CTGCA GCGCC TTTTTATGCAGTACA TERM 837 676650 - 676618 - g 86 -9.9 -4.29845 | gap 2 GAACGGAAGCTAAAA CTGG-CGGCG-CGCG ACCTG CGCGACACCGACCAG AAGGTGTATGATATT SeD_A0677 676435 - 676776 + | transposon tn10 tetd protein SeD_A0678 677006 - 676782 - | putative inner membrane protein SeD_A0679 678215 - 677097 - | carboxylate-amine ligase YbdK SeD_A0680 678931 - 678227 - | 4'-phosphopantetheinyl transferase EntD SeD_A0681 681233 - 678978 - | ferrienterobactin receptor TERM 838 679890 - 679920 + g 77 -8.3 -4.07568 | overlap 679886 679883 679893 ACGTAGCCCCGGCGT CAGCATGGTGCTG TCGGT CAGTTCCATGTTG TTTTCAGCAAACAGA TERM 839 680304 - 680318 + g 77 -7.8 -4.24963 | opp_overlap 680306, overlap 680295 GTAGTTCTGCCGATA GAGGCG GTT CGTCTC TTTTCCGTAATTATC TERM 840 682437 - 682416 - g 77 -8 -4.08216 | gap 1, opp_overlap 682433 TTACCCGGCTGAAAA CCG-GCGCA TTATG TGCGCGCGG ACTGCGTATCGTACT SeD_A0682 681422 - 682636 + | enterochelin esterase SeD_A0683 682667 - 682885 + | hypothetical protein TERM 841 683516 - 683548 + G 72 -12 -2.55712 | gap 2, overlap 683515 683514 CGGCGTCAATGTCTG CCGCGC-CGTTG-CCG GGG CGGTCGGCGAGCGCGG ATATTCTACGTATGA TERM 842 684244 - 684224 - g 75 -11.1 -3.41325 | opp_overlap 684243, overlap 684222 CACACCTTAATAATA CGGCGGTAA CGA TTCCCGCCG CCACGCTTAGCGATT TERM 843 684294 - 684284 - g 74 -2.4 -5.03715 | AGCAGGCGCAAAAAA CGCC AGA GGCT TCCGCGTTGGCAGAT TERM 844 686328 - 686361 + G 95 -10.3 -4.67904 | gap 1, opp_overlap 686324 GGCGCAAGGGATCGC CGCC-CGGTTGCGC GCGCGCG GCGAAACCGTGGCG TTTTTGGGGTTACTG TERM 845 686430 - 686416 - g 78 -7.1 -4.57341 | AACTGGCGGGAAAAA GAGGC GAATG GCCTC AATCCGGACGTATTG SeD_A0684 682882 - 686766 + | enterobactin synthetase component F TERM 846 686832 - 686806 - f 93 -14 -3.65084 | opp_overlap 686806 AATTAAATCCTGAAA CCCATAATAATT ACT AATTATTATGGG TTTTTTATTGCAACT TERM 847 686806 - 686832 + F 100 -14 -5.45652 | opp_overlap 686806 AATTAAATCCTGAAA CCCATAATAATT ACT AATTATTATGGG TTTTTTATTGCAACT TERM 848 687670 - 687656 - g 83 -7.8 -4.55128 | AGCTGGAAATCAAAA CCCGCT ATG AGCAGG AAAAGCTGGCGATGG SeD_A0685 687016 - 688152 + | ferric enterobactin transport protein FepE TERM 849 688165 - 688184 + T 95 -12.2 -4.05389 | opp_overlap 688165 TGATTTACCCGAAAA GCCGGATA GCGA TATCCGGC TTTGTCATCTGTGTG TERM 850 688184 - 688165 - T 95 -12.2 -4.14739 | opp_overlap 688165 TGATTTACCCGAAAA GCCGGATA GCGA TATCCGGC TTTGTCATCTGTGTG SeD_A0686 688999 - 688205 - | ferric enterobactin transport ATP-binding protein FepC SeD_A0687 689985 - 688996 - | ferric enterobactin transport system permease protein FepG TERM 851 689180 - 689131 - G 70 -9.3 -3.75024 | gap 2, opp_overlap 689132 GGCCAGTAGTAATAA TGCGCCGCACAGCGCCGACTGGG TTAATC CCCAG-CG-CGCTGTGCCGCTAA GACGGTGGGCGATGT TERM 852 689770 - 689754 - G 74 -4.3 -4.7078 | overlap 689743 689756 TCAACGACTGAAAAA TCGCGCC ACT GACGCCA AGCGCAGCGCCAATC SeD_A0688 690992 - 689985 - | ferric enterobactin transport system permease protein FepD TERM 853 690642 - 690632 - G 74 -6.8 -4.29432 | TAAATGCCATGAAAA GCTG CTC CAGC GGCGTGGAGAAACCA SeD_A0689 691103 - 692347 + | enterobactin exporter EntS SeD_A0690 693366 - 692410 - | ferric enterobactin transporter TERM 854 693002 - 692973 - G 77 -11.4 -3.60805 | gap 1 AGAGCTGATCGTAAA GCGCCAGC-GCGG AGTCG CCGCCGGTGGCGC TAATCAAAATGAGAT SeD_A0691 693675 - 694850 + | isochorismate synthase EntC TERM 855 695578 - 695595 + G 74 -4.7 -4.82901 | ACTACGCCATGAGTT CGCCGGG CGCG CTGGGCG TTTTTCTCGCCAAAG TERM 856 696070 - 696085 + G 74 -3.2 -4.87626 | opp_overlap 696063 TACACAATGCCAGCG CCTTTG ACGC CAACGG TTTTTACTGTTCCGG TERM 857 696455 - 696435 - g 76 -5.4 -4.72201 | overlap 696438 GTCGATAAAAAACAA TTACGCCA GCGGT TGGCGTCA CGTTCACCGCTCTGA SeD_A0692 694860 - 696470 + | 2,3-dihydroxybenzoate-AMP ligase SeD_A0693 696484 - 697341 + | isochorismatase TERM 858 697847 - 697901 + G 70 -10.1 -3.36878 | overlap 697848 GCTGGCGGGCTGTGG GGTGCGCTGTAATGT-GGTGTCGCCCG GTT CGACCGACACCGATAT-GCAGCGCACG TTATGGGTGAGTGAA TERM 859 697848 - 697900 + G 78 -13.6 -2.61912 | overlap 697847 CTGGCGGGCTGTGGG GTGCGCTGTAATGT-GGTGTCGCCCG GTT CGACCGACACCGATAT-GCAGCGCAC GTTATGGGTGAGTGA SeD_A0694 697341 - 698096 + | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase SeD_A0695 698099 - 698512 + | esterase YdiI cstA 698694 - 700799 + | carbon starvation protein A TERM 860 700815 - 700841 + F 72 -9.4 -3.6502 | opp_overlap 700814 700816, overlap 700816 TCTTTTTACATCAAT AGCCCTCTCC AGAATAA GGAGAGGGCA TTTGGATGACAGGTG TERM 861 700816 - 700840 + F 82 -12.9 -2.78798 | opp_overlap 700814 700816, overlap 700815 CTTTTTACATCAATA GCCCTCTCC AGAATAA GGAGAGGGC ATTTGGATGACAGGT TERM 862 700840 - 700816 - f 83 -12.9 -3.19602 | opp_overlap 700816 700815, overlap 700814 CTTTTTACATCAATA GCCCTCTCC AGAATAA GGAGAGGGC ATTTGGATGACAGGT SeD_A0697 700863 - 701060 + | hypothetical protein TERM 863 701359 - 701371 + F 71 -3.4 -4.81249 | overlap 701368 CATAAGCTACTTTCG TTCC GTGCA GGAA TTTTTCCGTTTGCGG TERM 864 701868 - 701849 - f 84 -10.6 -3.95073 | opp_overlap 701849 CGGGATAGCGACAAA CGGCCGCC AGAC GGCGGGCG AGCGCTTTGGCGGTA TERM 865 703142 - 703120 - g 76 -11.9 -3.01712 | opp_overlap 703118 CGTTTTGCGTCAATA CGCCGGCGC AACTG GCGCTGGCG GATATGCTGCGCGCC SeD_A0700 702309 - 703469 + | aminotransferase YbdL SeD_A0701 704087 - 703470 - | IbrB protein TERM 866 703531 - 703497 - GT 71 -10 -3.29144 | opp_overlap 703495 703492 703497 703501, overlap 703478 CCACGCTCTGGAGAA TCGACGGTCTGCAAAA AGC TCCTGCAGGCCGTTGA TCTGTTTCAGGCGCA TERM 867 703497 - 703531 + gT 71 -10.1 -3.24232 | opp_overlap 703478 703497, overlap 703495 703492 703501 CCACGCTCTGGAGAA TCGACGGTCTGCA AAAAGCTCC TGCAGGCCGTTGA TCTGTTTCAGGCGCA SeD_A0702 705295 - 704060 - | IbrA protein TERM 868 704265 - 704281 + gr 85 -2.2 -5.55769 | CCATGCTGCGTTTGT GGAATG GTGTG CATGCC TTTTTTCTTATACCA TERM 869 704803 - 704824 + gr 70 -2.8 -4.82901 | opp_overlap 704803 CGTCGGAACGAATAC CGACCAGC ATAGCG GCAGGACG TTTTTCTGAAAACCA TERM 870 705041 - 705030 - GR 74 -2.2 -5.10461 | GCGACCCAATAAAAA CGCT CAAT AACG TCCGCGTAGTATTCA SeD_A0703 706362 - 705445 - | transcriptional regulator, LysR family TERM 871 705654 - 705629 - G 74 -2.5 -5.00616 | overlap 705636 GTTTGTGGTAAAAAA CCAATAAGCTC CGTG GAGCTGATAGA GTTGGCGATGGTCAT SeD_A0704 707425 - 706679 - | thiol:disulfide interchange protein DsbG TERM 872 706831 - 706884 + g 71 -8.1 -3.80573 | gap 1, overlap 706832 GATTAATGACTTTCA TCTGCGCCGGGGGGATGGACGCCGGA ACC TCCAGC-TTCATCTTTCCTGCGGAGG TTTCATAGTCATGCC TERM 873 707692 - 707710 + H 100 -16 -5.00138 | opp_overlap 707689 TAGTTCAGGTAATGG GGCCGCCT GTC AGGCGGCC TTTTTACTTTAGATG TERM 874 707755 - 707765 + H 72 -8.2 -3.81414 | GTGTTCACAATGTCG CCCG AAT CGGG TTGTTAGTTAACGCT TERM 875 707941 - 707919 - g 95 -10.6 -4.57569 | CCAGGCGTTCAAAAA CGGTGAATTC ATT GAAGTCACCG AGAAAGATACCGAAG ahpC 707866 - 708429 + | alkyl hydroperoxide reductase subunit C TERM 876 708566 - 708583 + F 95 -12.7 -4.05788 | AAATTGTTTCAGTCA TGGGCGC ACCC GCGCCCA TTTCATTTCAGCACC TERM 877 710376 - 710396 + F 100 -14.1 -5.63517 | opp_overlap 710376 ATCAATACTCTGAAA CCGTCTGTT AAT AACAGACGG TTTTTTATTTCAACG TERM 878 710396 - 710376 - f 93 -14.1 -3.61328 | opp_overlap 710376 ATCAATACTCTGAAA CCGTCTGTT AAT AACAGACGG TTTTTTATTTCAACG SeD_A0707 710569 - 711129 + | putative component of anaerobic dehydrogenase TERM 879 711145 - 711156 + F 76 -4.4 -5.00884 | TGAGACGGGACATCT GAAC AGAC GTTC TTTTTTAAAGGGGAT TERM 880 712599 - 712570 - f 77 -9.3 -3.90291 | gap 1, overlap 712580 AGTTCTTCAACGAAA CGGTGCAACACGCT GAT ATCGTGCTGC-CCG TTACCACCGCGTTTG TERM 881 712910 - 712875 - f 80 -5.4 -5.0133 | GACGGGCCGAAAAAA GCGATCCTGCCAAG TTCTGCCG CCTGGTACGATCGC AAGTTCAAAACGCCG TERM 882 712977 - 712967 - f 73 -4.6 -4.83169 | overlap 712968 ACTGGCGGAGAAAAA CGGC CAC ACCG CGCTGCCGGAATACA SeD_A0710 713399 - 713956 + | molybdopterin-containing oxidoreductase iron-sulfur subunit SeD_A0711 713956 - 714723 + | molybdopterin-containing oxidoreductase membrane anchor subunit TERM 883 714734 - 714774 + T 84 -8.2 -4.56597 | opp_overlap 714741, overlap 714735 714738 ACTAACGATAATGCA GTAAAAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTGTAAG TTTTTAGCCACCAGG TERM 884 714735 - 714773 + T 82 -11.7 -3.33744 | opp_overlap 714741, overlap 714734 714738 CTAACGATAATGCAG TAAAAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTGTAA GTTTTTAGCCACCAG TERM 885 714738 - 714770 + T 82 -13.4 -2.83903 | opp_overlap 714741, overlap 714735 714734 ACGATAATGCAGTAA AAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTG TAAGTTTTTAGCCAC TERM 886 714767 - 714741 - T 100 -20.2 -4.77759 | opp_overlap 714738 714735 714734 ATAATGCAGTAAAAA GCCCTGCCAGGC GTG ACCTGGCAGGGC GTGTAAGTTTTTAGC SeD_A0712 715084 - 714791 - | universal stress protein G TERM 887 715819 - 715796 - g 89 -3 -5.5112 | gap 1, opp_overlap 715796 715801, overlap 715800 715801 GCGATGAATAAAAAA CAGATCCCGCC ACC GGCGGCG-CTG TTTGGGTATAGCCAT TERM 888 716361 - 716376 + G 87 -8.2 -4.64334 | overlap 716339 GCGTGGTCAGCGTGC CCGGCG TGTA TGCCGG TTTTATTCACGGCTT TERM 889 716445 - 716433 - g 74 -7.7 -4.14392 | opp_overlap 716433 GGCTAACTTTTAAAA TGGGT CAA ACCCA TGTTCACGCGTGGCT SeD_A0714 715442 - 716680 + | oxidoreductase, zinc-binding dehydrogenase family TERM 890 716711 - 716730 + T 79 -12.2 -2.87881 | opp_overlap 716711, overlap 716713 716727 716729 AAGGGCTAACGGAAA GAGGATGC GCAG GCATCCTC TGTGTAAACGCATTA TERM 891 716730 - 716711 - T 93 -12.2 -3.75897 | opp_overlap 716711 716713 716727 716729 AAGGGCTAACGGAAA GAGGATGC GCAG GCATCCTC TGTGTAAACGCATTA SeD_A0715 717173 - 716763 - | nucleoside diphosphate kinase regulator TERM 892 717254 - 717232 - R 100 -12.7 -5.07652 | opp_overlap 717232 GGTCCCAAAAGAAAA CCCTCACCG TCTGG CGGCGAGGG TTTAACTCTCATGAT TERM 893 717232 - 717254 + r 86 -11.2 -3.72968 | opp_overlap 717232 GGTCCCAAAAGAAAA CCCTCACCGT CTG GCGGCGAGGG TTTAACTCTCATGAT TERM 894 718087 - 718076 - R 71 -3.6 -4.82901 | opp_overlap 718060 TGGCTTTGACAAAAA CCGG TTTG CCAG GAAAGCGCCAGCACA TERM 895 718265 - 718296 + r 80 -7.2 -4.63184 | opp_overlap 718268, overlap 718266 718268 CCATTTAATCATAAA AAATGCCGCTCAGG TGAA CCTGAACGGCATCA TTTTTAACCTGCGTT TERM 896 718266 - 718295 + r 77 -10.7 -3.37188 | opp_overlap 718268, overlap 718265 718268 CATTTAATCATAAAA AATGCCGCTCAGG TGAA CCTGAACGGCATC ATTTTTAACCTGCGT TERM 897 718268 - 718293 + r 83 -13.3 -3.25166 | opp_overlap 718268, overlap 718266 718265 TTTAATCATAAAAAA TGCCGCTCAGG TGAA CCTGAACGGCA TCATTTTTAACCTGC TERM 898 718293 - 718268 - R 100 -15.5 -5.37345 | opp_overlap 718268 718266 718265 TTTAATCATAAAAAA TGCCGCTCAGG TGAA CCTGAACGGCA TCATTTTTAACCTGC TERM 899 719222 - 719211 - R 71 -7.2 -4.05208 | overlap 719212 ATCCACATCAAATAA CCGC CGAT GCGG CGTGCGGAAGGATCG TERM 900 719224 - 719212 - R 73 -10.5 -3.02402 | overlap 719211 TCCACATCAAATAAC CGCCG ATG CGGCG TGCGGAAGGATCGTT TERM 901 719416 - 719402 - R 71 -3.4 -4.74801 | overlap 719404 GAATTTTACCAAAAA CAGCGC AAT GCGGCG CCCCAGCCCGGTCAC citG 720716 - 719823 - | triphosphoribosyl-dephospho-CoA synthase CitG citX 721242 - 720691 - | holo-ACP synthase CitX citF 722775 - 721246 - | citrate lyase, alpha subunit TERM 902 721890 - 721901 + g 75 -5.8 -4.66537 | opp_overlap 721880 721878 721877 AATTAGCCACAATGT TGCG GCTA CGCA TTTTGTCTTCCAGGA TERM 903 722052 - 722066 + g 72 -2.1 -4.90778 | gap 1, overlap 722051 722055 TAGTGGTCATGCGGG TC-GCG CCAG CGCCGA TTTTGTTTGCATCAC citE 723693 - 722785 - | citrate (pro-3S)-lyase, beta subunit TERM 904 723525 - 723537 + g 78 -6.9 -4.63527 | opp_overlap 723524 723522 CGTGATATACCAGAC GGCGC GCC GCGTC TTTTTCGCGTAATGC citD 723986 - 723690 - | citrate lyase acyl carrier protein TERM 905 723850 - 723830 - G 73 -8.9 -3.91897 | CGTCGTAGCGAGAAA GCACCTCCA GGA TGGTGGCGC GAATGGCCTCGCCAA citC 725059 - 723983 - | [citrate (pro-3S)-lyase] ligase SeD_A0725 725125 - 725262 + | hypothetical protein TERM 906 727795 - 727765 - T 85 -13.9 -3.02043 | AAGCCTGGTTTAAGA TGCCGGGGCGATG TTTTC CCTCGCCCCGGCT TACCGGCTATCAGCC SeD_A0728 729235 - 727805 - | dicarboxylate transporter TERM 907 728154 - 728134 - G 71 -10.5 -3.25111 | overlap 728132 728149 TTAAAATCACTAAGA CCAGCATCA GAA TAATGCTGG CGGAGCCAAAAGAAG TERM 908 728720 - 728698 - G 89 -13.4 -3.59262 | CCGGAGAGGCGCAAA TAGCCGCCGC CGC GCCGCGGCTA ATGCCGACGTTGACC TERM 909 729113 - 729103 - G 95 -8.2 -4.99043 | CGCCGACAAATAAAA CGCC AGT GGCG GAATATCCCTTAATG TERM 910 729243 - 729232 - G 71 -5.8 -4.33997 | GAGTAAAAATAAGAA CCAC AAAA GTGG TATAAAAATGTACCG pagP 729581 - 730141 + | antimicrobial peptide resistance and lipid A acylation protein PagP TERM 911 730287 - 730303 + F 71 -7.3 -4.02302 | overlap 730265 GTTGTACTGGTATCC GACACAG CAT TTGTGTC TATTTTTCATGTAAA cspE 730329 - 730538 + | cold shock protein CspE TERM 912 730567 - 730583 + T 100 -10.8 -5.81032 | opp_overlap 730567 AGCAAGATTTCAAAA CCCGCC CTTTC GGCGGG TTTTTTTTGCGCTTA TERM 913 730583 - 730567 - T 90 -10.8 -4.20042 | opp_overlap 730567 AGCAAGATTTCAAAA CCCGCC CTTTC GGCGGG TTTTTTTTGCGCTTA crcB 730979 - 730596 - | CrcB protein TERM 914 731232 - 731258 + G 76 -10 -3.86194 | overlap 731253 CTTGACCTGCCGATT CGCGCCGCGCAG CCG CTGGATGGCGCG TTTATGACGCGGCTT SeD_A0732 731070 - 731858 + | hydrolase YbeM TERM 915 731946 - 731965 + F 74 -5.6 -4.72272 | gap 1, overlap 731948 TATTCTCAGGTTAAT CCGGC-GCG TTA CGCAGCCTG TTTTTAGTGAAGAAG SeD_A0733 731987 - 732190 + | twin arginine-targeting protein translocase, TatA/E family TERM 916 732239 - 732225 - T 100 -8.5 -5.58454 | opp_overlap 732225 CGCAGAGTAAAAAAA CCGGC GAGTT GCCGG TTTTTTTTGCCTGAA TERM 917 732225 - 732239 + T 100 -9.2 -5.81412 | opp_overlap 732225 CGCAGAGTAAAAAAA CCGGCG AGT TGCCGG TTTTTTTTGCCTGAA lipA 733241 - 732276 - | lipoic acid synthetase SeD_A0735 733416 - 733282 - | hypothetical protein SeD_A0736 734400 - 733447 - | LysR-family transcriptional regulator lipB 735343 - 734702 - | lipoyltransferase SeD_A0738 735706 - 735443 - | protein YbeD TERM 918 735764 - 735734 - R 100 -13.5 -5.82316 | gap 1, opp_overlap 735740, overlap 735740 ATTACGTAAAAAAAA TAACAACTCCCGCC ACAG GGCGGGAGTT-TTA CTGATGCATAGTATA TERM 919 735759 - 735740 - R 100 -15 -4.53495 | opp_overlap 735740, overlap 735734 TAAAAAAAATAACAA CTCCCGCC ACAG GGCGGGAG TTTTACTGATGCATA TERM 920 735740 - 735759 + r 100 -15 -4.3129 | opp_overlap 735734 735740 TAAAAAAAATAACAA CTCCCGCC ACAG GGCGGGAG TTTTACTGATGCATA dacA 737026 - 735815 - | serine-type D-Ala-D-Ala carboxypeptidase TERM 921 736819 - 736835 + g 71 -4.4 -4.63218 | gap 1, overlap 736817 TCAGACTGGCCGGGT CG-CGAC GTTC GTCGGCG TTTTGTTCCGCCAGA TERM 922 736979 - 736961 - G 74 -8 -4.03234 | overlap 736962 736972 TGCGGTTGAGATAAA CGCGGCAC AAA GCGCCGTG GTGAGCGCCATGCGC SeD_A0740 738299 - 737166 - | rare lipoprotein A TERM 923 737558 - 737599 + g 81 -14.3 -2.67708 | gap 1, opp_overlap 737574, overlap 737585 CAGGCGCCAGCGTAG TCGGCGCGCCGAGGAAGCCG CTG CTGCTCAC-CGGCGCGCCGG TGGTATCGTCACTTT mrdB 739422 - 738310 - | rod shape-determining protein RodA mrdA 741326 - 739425 - | penicillin-binding protein 2 TERM 924 739990 - 740003 + g 74 -2.3 -5.03747 | opp_overlap 740001, overlap 740001 ACCGGAATCGTATCG CCCTG ATAC CACGG TTTTTTAAAGCGTTT TERM 925 740726 - 740741 + g 72 -2.5 -4.85653 | gap 1, overlap 740723 740727 CGATGTCATGGGTGG C-GGCG TAGTT CGCCAG TTTGTTTTCTCTGTC TERM 926 740753 - 740769 + g 70 -8.7 -3.63843 | overlap 740754 740759 CCAGTTTGTTTTCTC TGTCGAG ACG CTCGACG TCTTTATCATTGATT TERM 927 740950 - 740963 + g 74 -2.3 -5.00616 | opp_overlap 740944 GAAGTAAAGCGATGG GATCG GGCG CGCTC TTTTTTAAAGGCGGC TERM 928 741267 - 741255 - G 78 -6.2 -4.80396 | CAAAATACCCAAAAA GGCG ACCAG CGCC CGACGCACAAACAGT SeD_A0743 741824 - 741357 - | hypothetical protein SeD_A0744 742145 - 741828 - | iojap family protein TERM 929 742238 - 742250 + r 72 -10.5 -2.8655 | TTAACGCTAACCTTC CGGCG GGA CGCCG TGTAGTATACCTGAA TERM 930 742291 - 742303 + r 79 -10.5 -3.53761 | opp_overlap 742269 TACCGGGACTTATGT CGCCG GAT CGGCG TTTAAAACCAGATTA cobC 743082 - 742474 - | alpha-ribazole phosphatase TERM 931 743138 - 743159 + H 70 -2.3 -5.00616 | CCCCTGATTGCGCAA CGTTTTTTT CACT AAAATAGCG TTTTTTGGCCGGAGG TERM 932 743662 - 743676 + G 79 -11.4 -3.61894 | opp_overlap 743650 AATCCTACCGGCCTG CTGCCG GAG CGGCAG TTATTACAGGCCATT TERM 933 744008 - 744028 + G 73 -8.9 -3.89346 | overlap 743998 GGTTACGGGAGGAGG GCGCCCGGT TTT ATCAGGCGC TTTGTCAGCTCCCCC TERM 934 744108 - 744136 + G 84 -8.7 -4.28548 | GCGAGAGGATATTGA TCTGCAGCGACGG TTG CTGACGCAGCGGA TTTTAATCCGTAGCT cobD 743179 - 744273 + | threonine-phosphate decarboxylase nadD 744898 - 744248 - | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 935 744591 - 744581 - G 81 -8.2 -4.30719 | opp_overlap 744584 744588 CTGGCCGATAATAAA CGCC AGC GGCG CTTCGGGGCCCTGTT holA 745922 - 744891 - | DNA polymerase III, delta subunit TERM 936 745759 - 745733 - G 73 -5.9 -4.45083 | gap 1, overlap 745734 GGCAGAGTGAGAAAA GCGATCCCCAGT CGGT ACTGG-GATCGA GAGTAAAAGCGTGGT TERM 937 745897 - 745863 - G 93 -15.8 -3.00923 | gap 1, opp_overlap 745863 745864, overlap 745856 GCCCAATAGCAGATA TGCCGCGCGCAGCCC TTCGTT GAGCTGCGCGCGG-A GTTGTTCAGGATACA TERM 938 745863 - 745898 + g 89 -13.9 -3.63515 | opp_overlap 745863 745856, overlap 745864 GCCCAATAGCAGATA TGCCGCGCGCAGCCC TTCGTT GAGCTGCGCGCGGAG TTGTTCAGGATACAA TERM 939 745864 - 745897 + g 83 -15.2 -2.77895 | opp_overlap 745863 745856, overlap 745863 CCCAATAGCAGATAT GCCGCGCGCAGCCC TTCGTT GAGCTGCGCGCGGA GTTGTTCAGGATACA SeD_A0750 746512 - 745922 - | LPS-assembly lipoprotein RlpB TERM 940 745959 - 745999 + g 76 -10.2 -3.74872 | overlap 745958 ACGCGTGCTGGCGTA GAGGCGGGCGCCGCCGTC TCATT GTCGGCGGTAGCCTCCTC TTTCGTCGCCTGAAT TERM 941 746027 - 746062 + g 74 -8.2 -3.98661 | opp_overlap 746016 AATATCCGCCGCGCG GACGCTGGTCAGCTTA CGAA TCAGCTGTTCAGCGGC TTTGTCGTACATCTC TERM 942 746281 - 746313 + g 75 -11.3 -3.3353 | overlap 746277 746285 AAATAGTCACCGTTC CAAGCCGCAGAGACG GAA CGTCTTTGCGCGTTG TGTCTTTATCAAGCA TERM 943 746285 - 746310 + g 80 -10.5 -3.80279 | gap 1, overlap 746281 746277 AGTCACCGTTCCAAG C-CGCAGAGACG GAA CGTCTTTGCGCG TTGTGTCTTTATCAA TERM 944 746454 - 746421 - G 84 -13.9 -3.05463 | ATCGTTTTCATTGAA GCCGGAACCTGCGTA GTGC TACGCAGATGCCAGC CGCATCCGGCGGTGA leuS 749109 - 746527 - | leucyl-tRNA synthetase TERM 945 748195 - 748206 + g 81 -3.6 -5.28778 | AATCGCTTTATAGCC GGTG TCGA CGCC TTTTTTCTCCATGGT TERM 946 748259 - 748299 + g 73 -5.2 -4.56597 | opp_overlap 748270, overlap 748260 748270 TTGGTGTTACGGCAT TCGTCGATGAACGCCGCC AGCTC GGCGTTGTTCGCCGCCGC TTTTTGCGCCAGCGG TERM 947 748764 - 748780 + g 76 -5.1 -4.8048 | opp_overlap 748764, overlap 748756 748754 AGTCATAGCCAAAAC CCAGC GTTTTGA GCTGG TTTTTCATGTACGCG SeD_A0752 749397 - 749687 + | hydrolase, UxaA family SeD_A0753 749650 - 750876 + | hydrolase, UxaA family TERM 948 750884 - 750905 + F 75 -10.1 -3.54653 | opp_overlap 750884 750885, overlap 750885 CGTTCTGATACCAAA TCGGGCAGC ACAA GCTGTCCGG TTATCTCCTGGGAAT TERM 949 750885 - 750904 + F 73 -11.4 -2.72471 | opp_overlap 750884 750885, overlap 750884 GTTCTGATACCAAAT CGGGCAGC ACAA GCTGTCCG GTTATCTCCTGGGAA TERM 950 751498 - 751519 + G 85 -4.3 -5.22039 | opp_overlap 751498 CAAGTTTCTTAAACA GGGCAGCGT GGTA ACGATTCCC TTTTTTGCCTTTGGG SeD_A0754 750926 - 751879 + | 2-keto-3-deoxygluconate permease TERM 951 751927 - 751899 - f 84 -8.2 -4.64861 | gap 1, opp_overlap 751905, overlap 751903 TCGGCGGAAAATAAA TCACGA-CGGGCG GTCT CGCCCGTTCATAA ACCAACAGGATGGTG TERM 952 751905 - 751920 + F 79 -11.8 -3.14132 | opp_overlap 751903 751899 GAAAATAAATCACGA CGGGCG GTCT CGCCCG TTCATAAACCAACAG SeD_A0757 753968 - 754441 + | hypothetical protein TERM 953 754454 - 754477 + T 82 -13.2 -3.04263 | gap 1 TAAGGTTCATTATCG TGAGCGGACGG TTG CCGTCCGC-CA TGTTAAGCGTGCAGT SeD_A0758 755475 - 754480 - | sel1 repeat-containing family protein SeD_A0759 755693 - 756307 + | putative cytoplasmic protein TERM 954 757676 - 757687 + G 76 -3 -5.09762 | overlap 757680 TTGGCCTCTGGCAGG TGAT TAAA ATCA TTTTATTTATTGACG SeD_A0760 756304 - 757737 + | DnaJ domain protein SeD_A0761 757749 - 758444 + | putative cytoplasmic protein SeD_A0762 758441 - 759913 + | DnaJ domain protein TERM 955 759943 - 759929 - T 88 -12.8 -3.65529 | opp_overlap 759929 ACAGGGGCAGTGAAA GCGCCG TTA CGGCGC TTTCGGCTCGTCAAT TERM 956 759929 - 759943 + T 88 -12.8 -3.62275 | opp_overlap 759929 ACAGGGGCAGTGAAA GCGCCG TTA CGGCGC TTTCGGCTCGTCAAT SeD_A0763 761614 - 759935 - | chaperone protein HscC TERM 957 760147 - 760179 + g 82 -11.2 -3.77196 | opp_overlap 760145, overlap 760151 CGCGGGGATAAATTT TCAGCGCCAGCAGC CGCTC GCGGCTGGCGTCGA TTTGCTGCGTCGTCA TERM 958 760151 - 760175 + g 75 -12.8 -2.68279 | opp_overlap 760145, overlap 760147 GGGATAAATTTTCAG CGCCAGCAGC CGCTC GCGGCTGGCG TCGATTTGCTGCGTC TERM 959 760681 - 760661 - G 70 -8.9 -3.69283 | opp_overlap 760661 760672 CAATTTACCGAATAA GCGCACCGC GAT GCGTTGCAC CAGCGGCATCTGTGA TERM 960 760867 - 760891 + g 91 -12.2 -4.14392 | gap 1, opp_overlap 760858 GATAAAGCCAGCTCA TGCG-CAGCGG GGAG CCGCTGGCGCA TTTTGCGGCTTCAAC TERM 961 761683 - 761650 - R 86 -11.9 -3.51633 | gap 1, opp_overlap 761654 761657, overlap 761641 761654 761657 AGAGAGTTTATAGAA TAAAGAACACCAC-CC TCT GGCGTGGTGATCTTTA TCAATGTCACGCCTG TERM 962 761654 - 761679 + r 74 -8.3 -3.95073 | gap 1, opp_overlap 761650 761654 761657, overlap 761657 AGTTTATAGAATAAA GAACACCAC-CC TCT GGCGTGGTGATC TTTATCAATGTCACG TERM 963 761679 - 761654 - R 81 -8.3 -4.39329 | gap 1, opp_overlap 761654 761657, overlap 761650 761657 AGTTTATAGAATAAA GAACACCAC-CC TCT GGCGTGGTGATC TTTATCAATGTCACG TERM 964 761676 - 761657 - R 79 -8.6 -4.30793 | gap 1, opp_overlap 761654 761657, overlap 761654 761650 TTATAGAATAAAGAA CACCAC-CC TCT GGCGTGGTG ATCTTTATCAATGTC SeD_A0764 762928 - 761690 - | putative cytoplasmic protein SeD_A0765 763895 - 762960 - | inosine-uridine preferring nucleoside hydrolase TERM 965 764003 - 763982 - R 82 -13 -2.90714 | GTAAAGCGTGAGATA GCGCGCAC TCTGAC GTGCGCGC CGGGAAGATTAGTGC gltL 764737 - 764012 - | glutamate/aspartate ABC transporter, ATP-binding protein gltK 765411 - 764737 - | glutamate/aspartate ABC transporter, permease protein GltK TERM 966 764812 - 764802 - G 72 -2.4 -4.92812 | TGATAACAAAATAAA CGGC GCC GGCG AACAGAATCATTTCG gltJ 766151 - 765411 - | glutamate/aspartate ABC transporter, permease protein GltJ TERM 967 766188 - 766172 - R 100 -12.3 -5.76949 | TACTCCGAAAAAAAA GGGTAGC AGC GCTACCC TCGAAGATTGTTGCC gltI 767219 - 766311 - | glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein lnt 769163 - 767574 - | apolipoprotein N-acyltransferase TERM 968 767825 - 767796 - GR 71 -9.9 -3.1505 | AGTACTGCGCAGTAA CGGACGCGCCAGC TCCA GCGAACGCATCCG CGCCATCTGGAAATG corC 770010 - 769132 - | magnesium and cobalt efflux protein CorC TERM 969 769359 - 769334 - GR 75 -9.9 -3.53343 | gap 1 AAGTGGGTGCCGAAA GCGTC-ATTGAA GTC TTCAATCGACGC CAGCGCGCGAATCGT TERM 970 769950 - 769963 + gr 75 -3.8 -4.946 | GCTGGCTGAGTAGCA GGGA AAAAAA TCCC TTTTTACTGTTTACT SeD_A0773 770156 - 770007 - | hypothetical protein SeD_A0774 770641 - 770168 - | hypothetical protein SeD_A0775 771684 - 770638 - | PhoH family protein TERM 971 771837 - 771805 - R 72 -4.8 -4.6955 | gap 1, overlap 771806 771807 GATGAAGAGAGAAAA TTG-CAAGGCCCGTC GGGC GACAGGCCATGACCA GGAAGCCCGACAGGC TERM 972 771867 - 771842 - R 83 -13.3 -3.23216 | gap 1, opp_overlap 771841 771842 771865 GGCCATGACCAGGAA GCCCGACAGGCG TAG CGCC-ATCGGGC ATTATTGCCTTTCCT TERM 973 771842 - 771867 + r 74 -11.1 -2.86619 | gap 1, opp_overlap 771842, overlap 771841 771865 GGCCATGACCAGGAA GCCCGACAGGCG TAG CGCCA-TCGGGC ATTATTGCCTTTCCT miaB 773313 - 771889 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 974 774073 - 774047 - g 86 -10.9 -4.14392 | gap 1, opp_overlap 774046 774047 CGTCAAGTGTGAAAA TGC-GCCAGGCG ACAG CACCTGGCAGCA GTTTACGCCAACGGG TERM 975 774087 - 774097 + G 74 -2.4 -5.04987 | CAGTTTACGCCAACG GGGC CGC GCGC TTTTTTGCCGCTGTT SeD_A0777 773457 - 774632 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase SeD_A0778 775274 - 774699 - | putative inner membrane protein TERM 976 775082 - 775098 + g 72 -2.2 -4.91511 | ATTCCGCACTATTCT GGCG TAGCATGAC CGCC TTTTTCTGGTGCAGT TERM 977 775405 - 775378 - R 90 -13.6 -3.30597 | opp_overlap 775384, overlap 775384 ATAAACGCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTA AAGGTGGCTGGGGTA TERM 978 775399 - 775384 - R 100 -10.4 -5.1417 | opp_overlap 775384, overlap 775378 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTAAAGGTGGCT TERM 979 775384 - 775399 + r 93 -10.4 -4.60041 | opp_overlap 775384 775378 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTAAAGGTGGCT TERM 980 776324 - 776309 - R 100 -10.4 -5.60993 | opp_overlap 776309 TTTGCTATAAAAAAA GAGCCC CTAA GGGCTC TTTCGTCATCGTTAA TERM 981 776309 - 776324 + r 83 -10.4 -3.82031 | opp_overlap 776309 TTTGCTATAAAAAAA GAGCCC CTAA GGGCTC TTTCGTCATCGTTAA asnB 778005 - 776341 - | asparagine synthase TERM 982 777238 - 777258 + g 91 -6.8 -5.2189 | GGAGCGCTCCTGATC TTCGACGC GACGG GCGGCGAA TTTTTTGGTGATTGC TERM 983 777361 - 777376 + g 80 -5.4 -4.87665 | gap 1, overlap 777357 777360 TACGGATTCTTCCAG CGC-CTG GCG CAGCGCG TTTTTGTCGGTGACG SeD_A0787 779048 - 778296 - | NagD protein TERM 984 778548 - 778536 - G 73 -6.2 -4.52589 | opp_overlap 778540 TTTGCCGACATAAAA CGGC TTCCG GCCG GAAATTTTTTCAATG TERM 985 778923 - 778946 + g 87 -8 -4.58395 | TTGCGACGGGTAATT GGTCAGCAGC ACCA GCGGCAGACC TTTTTCCAGAATCCC nagC 780315 - 779095 - | N-acetylglucosamine repressor nagA2 781474 - 780320 - | N-acetylglucosamine-6-phosphate deacetylase TERM 986 780679 - 780691 + g 70 -9.1 -3.66356 | CCAGACAAAGTTTGT CGCCT TTA AGGCG TTTGGCATTGCGAAT TERM 987 781121 - 781150 + g 73 -9.4 -3.80114 | gap 1, overlap 781123 GTGCGGATGTTTTTC CA-GGTATTCGCG CATGA CGCGAATGCCCTG TTTCATCAATTCGTC TERM 988 781123 - 781147 + g 72 -12.2 -2.68381 | overlap 781121 GCGGATGTTTTTCCA GGTATTCGCG CATGA CGCGAATGCC CTGTTTCATCAATTC TERM 989 781528 - 781496 - R 82 -7 -4.8048 | gap 1, overlap 781497 781500 CCCCGATATCAAAAA TTTACCGCCCCGC ATTGACTG GCGGGGCGG-AGA CAACATTACAGACCT TERM 990 781525 - 781500 - R 87 -14.7 -2.87672 | overlap 781496 781497 GATATCAAAAATTTA CCGCCCCGC ATTGACTG GCGGGGCGG AGACAACATTACAGA nagB 782334 - 781534 - | glucosamine-6-phosphate isomerase TERM 991 781566 - 781583 + g 74 -7.1 -4.37198 | opp_overlap 781568 TTTCTGCTTCTAATT CATTGAA ATAT TTCAATG TTTTAACTTTAAGTT TERM 992 782515 - 782535 + H 73 -7.7 -4.08394 | ACAAAAAACACCCGT TTAATTTGC GAG GCGAATTAA TTTTCCACACACTCT TERM 993 782634 - 782618 - H 100 -8.7 -5.58179 | overlap 782619 782631 CAGCACAATAAAAAA CGGCTTC AAA GAAGCCA TATCGGCGTCTCGTA TERM 994 782633 - 782619 - H 80 -10 -3.9328 | overlap 782618 782631 AGCACAATAAAAAAC GGCTTC AAA GAAGCC ATATCGGCGTCTCGT nagE 782661 - 784613 + | pts system, N-acetylglucosamine-specific iibc component TERM 995 784700 - 784667 - f 74 -5.9 -4.5954 | opp_overlap 784672, overlap 784672 CGATATCACAGAAAA CATAAGCGGCAGAGG GGAA CCTTCGCCGCTTTTT TTTACCGCAATTAGC TERM 996 784672 - 784695 + F 100 -11 -5.75342 | gap 1, opp_overlap 784667 784672 TCACAGAAAACATAA GCGGCAGAGGG GAA CCTTC-GCCGC TTTTTTTTACCGCAA TERM 997 784695 - 784672 - f 87 -10.2 -4.05861 | opp_overlap 784672, overlap 784667 TCACAGAAAACATAA GCGGCAGAGG GGAA CCTTCGCCGC TTTTTTTTACCGCAA TERM 998 785852 - 785840 - g 93 -10.5 -4.42639 | AGATCTGAACGAAAA CGCGC CGC GCGCG ATGGCGGTAATCGAT glnS 784824 - 786491 + | glutaminyl-tRNA synthetase TERM 999 786534 - 786550 + F 100 -11.5 -5.38951 | AAAATACCTTGTCAA CGCCGCG TTT TGCGGCG TTTTTTCTCTGCATT TERM 1000 787232 - 787253 + F 74 -5.7 -4.57569 | overlap 787233 GGGGTGGATCGTTGT TCCGCAGGC GCAA GCCTCCGGC TTTTTCGACGACTCC TERM 1001 787233 - 787252 + F 70 -9.2 -3.3422 | overlap 787232 GGGTGGATCGTTGTT CCGCAGGC GCAA GCCTCCGG CTTTTTCGACGACTC SeD_A0795 788609 - 788941 + | YbfN TERM 1002 788958 - 788984 + T 100 -13.7 -5.07107 | AACCTGCCTTGCCAC CCACGGGCGAA TGTTT TCCGCCCGTGG TTTTTTCAGGCTTTA SeD_A0796 790294 - 788990 - | citrate-proton symporter TERM 1003 789564 - 789536 - G 90 -5.3 -5.18371 | gap 1 GGTGATAAAATAAAA CGTTG-TGGTGG TCATCG CCACCAGCAGCG TTCCGGCCGTAATAA TERM 1004 789960 - 789923 - G 89 -13.4 -3.6279 | opp_overlap 789923, overlap 789924 AAATCCTTGTAATAA CCGGCCCAACAGCACC AACGCA GGCGCTGCCAGGCCGA TCGTTTGGTAGCCGG TERM 1005 789959 - 789924 - G 83 -14.7 -2.77192 | opp_overlap 789923, overlap 789923 AATCCTTGTAATAAC CGGCCCAACAGCACC AACGCA GGCGCTGCCAGGCCG ATCGTTTGGTAGCCG SeD_A0797 791484 - 790345 - | citrate utilization protein B TERM 1006 790730 - 790708 - G 80 -4.7 -5.0538 | overlap 790710 CGGCAGGCTAAAAAA CGGGTAGGG CGCTT CCCAACCGG CGACGTAGTGATAGC cobZ 792874 - 791471 - | precorrin 3B synthase CobZ TERM 1007 791502 - 791515 + g 74 -9.5 -3.65991 | TGCGCCTCCTTGTGC GCCGC GCGG GCGGC TTCTATTCCCGCAAT TERM 1008 792136 - 792120 - G 71 -10.1 -3.57674 | overlap 792118 ACGCGAGTACAAATA CCGCCGT CGT ACAGCGG CGCCCTGGCATCAAT TERM 1009 792247 - 792237 - G 77 -8.2 -4.07687 | ACGCCCTGGTTAAAA CGCG TGC CGCG AATCAGGAAATTATC TERM 1010 792274 - 792284 + g 81 -8.2 -4.36914 | opp_overlap 792261, overlap 792261 792260 TATCCGCGGGCCATT CGCC GCG GGCG TTTTCTCCCCAGGCC TERM 1011 792523 - 792512 - G 90 -5.8 -5.24129 | overlap 792516 GCCGCCCATAAAAAA CGCA TTGG TGCG CGCAACGTGGAGCGC SeD_A0799 793898 - 792972 - | LysR-family transcriptional regulator TERM 1012 793431 - 793450 + g 82 -5.6 -4.98672 | TTCTTCAAGGATCGG TCTGGCGC TCCA GCGCAGGA TTTTATCTTTTTGAA TERM 1013 793977 - 793994 + r 75 -11.3 -3.03635 | opp_overlap 793977 GGAGGATATAAAAAA GCCAACC GGGC GGTTGGC TCTTCGAAAGATTTA TERM 1014 793994 - 793977 - R 100 -11.3 -5.39721 | opp_overlap 793977 GGAGGATATAAAAAA GCCAACC GGGC GGTTGGC TCTTCGAAAGATTTA SeD_A0800 794465 - 794013 - | ferric uptake regulation protein TERM 1015 794587 - 794571 - R 75 -6.5 -4.55128 | ATGCCGAAATGAAAA CCGCAAG TCT CTCGCAG ATGTTAATAAAACTG fldA 795376 - 794747 - | flavodoxin SeD_A0803 795721 - 795428 - | ribbon-helix-helix protein, CopG family TERM 1016 795843 - 795805 - gR 80 -13.1 -2.57244 | gap 1, opp_overlap 795807 795807 795808 795810, overlap 795801 TCAGCGAGGAAGCGA CGCCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA-G TTTTTAATCAGTTAG TERM 1017 795807 - 795843 + Gr 100 -10 -4.77157 | gap 1, opp_overlap 795805 795801, overlap 795807 795808 795810 AGCGAGGAAGCGACG C-CAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGAG TTTTTAATCAGTTAG TERM 1018 795807 - 795842 + Gr 77 -10.2 -3.45571 | opp_overlap 795805 795801, overlap 795807 795808 795810 AGCGAGGAAGCGACG CCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA GTTTTTAATCAGTTA TERM 1019 795808 - 795841 + Gr 83 -13.7 -2.6662 | opp_overlap 795805 795801, overlap 795807 795807 795810 GCGAGGAAGCGACGC CAACGCCCGCGCGCG TAAT CGCGCACAGGCGATG AGTTTTTAATCAGTT TERM 1020 795810 - 795839 + Gr 72 -10.5 -2.86601 | opp_overlap 795805 795801, overlap 795808 795807 795807 GAGGAAGCGACGCCA ACGCCCGCGCGCG TAAT CGCGCACAGGCGA TGAGTTTTTAATCAG SeD_A0802 795720 - 795842 + | hypothetical protein ybfF 796625 - 795855 - | esterase YbfF TERM 1021 797076 - 797065 - g 100 -7.2 -5.31275 | opp_overlap 797065 797056 GCCGAGCAGAAAAAA GCGG TCAA CCGC TTTATGCTGATTCTG TERM 1022 797065 - 797076 + G 71 -7.2 -4.03093 | opp_overlap 797065, overlap 797056 GCCGAGCAGAAAAAA GCGG TCAA CCGC TTTATGCTGATTCTG seqA 796810 - 797352 + | protein SeqA TERM 1023 797786 - 797776 - g 85 -2.4 -5.55769 | opp_overlap 797777, overlap 797778 GTCCATAACAAAAAA GGCG GCC CGCT GGCTGATGGTATTGT pgm 797377 - 799017 + | phosphoglucomutase, alpha-D-glucose phosphate-specific TERM 1024 799023 - 799011 - T 78 -6.2 -4.7078 | CGAAGTATTGAAAAA CGCC TGATG GGCG ATATGGAAGAAAAAG TERM 1025 799059 - 799032 - T 77 -11.4 -3.1247 | opp_overlap 799038, overlap 799038 ATGGGCGATATGGAA GAAAAAGGAGCC TTAC GGCTCCTTTTTT GTATTAACGGCGCTG TERM 1026 799053 - 799038 - T 100 -10.4 -5.12068 | opp_overlap 799038, overlap 799032 GATATGGAAGAAAAA GGAGCC TTAC GGCTCC TTTTTTGTATTAACG TERM 1027 799038 - 799053 + T 100 -10.4 -5.47159 | opp_overlap 799038 799032 GATATGGAAGAAAAA GGAGCC TTAC GGCTCC TTTTTTGTATTAACG TERM 1028 799074 - 799117 + T 79 -10.4 -3.50045 | gap 1, opp_overlap 799094 TGTATTAACGGCGCT GCGC-TTATCAGGCCTGTA AACCGCC TCCAGGCCGGATAAGGCGC TTGTGATATCTGACT SeD_A0807 799635 - 799132 - | putative cytoplasmic protein TERM 1029 799676 - 799646 - R 91 -11 -4.323 | opp_overlap 799675, overlap 799647 TTCAAAGAGTGAAAA TGCCCGGACTACCG TTA CCGCAGCCCGGGCG CGCCATCAGCCGTGT TERM 1030 799675 - 799647 - R 90 -14.5 -3.18657 | overlap 799646 TCAAAGAGTGAAAAT GCCCGGACTACCG TTA CCGCAGCCCGGGC GCGCCATCAGCCGTG TERM 1031 799675 - 799690 + r 70 -2.4 -4.91473 | opp_overlap 799646 TTACCGCAGCCCGGG CGCGCC ATCA GCCGTG TTTATTTTTCAATTC SeD_A0808 801001 - 799682 - | putrescine-ornithine antiporter TERM 1032 799839 - 799849 + g 74 -6.8 -4.25104 | opp_overlap 799839 AAGGCCACGAAGTTA GCGA CTT TCGC TTTTGATGACGGCAC speF 803196 - 800998 - | ornithine decarboxylase, inducible TERM 1033 802078 - 802089 + g 84 -3 -5.29782 | GCGCGATTGCCCTTT GATA TGGC TATC TTTTTTATGGATCTG SeD_A0810 804636 - 803959 - | KDP operon transcriptional regulatory protein KdpE SeD_A0811 807317 - 804633 - | sensor protein KdpD TERM 1034 804799 - 804767 - G 76 -10.4 -3.63068 | opp_overlap 804766, overlap 804760 804757 804768 CGATAGCATGGCAAA TCGCCAGCCCCAGC CCCAC GCCGGGGACGGCGG ACTCTTTGTTGCCGC TERM 1035 804798 - 804768 - G 79 -13.9 -2.7752 | opp_overlap 804766, overlap 804760 804757 804767 GATAGCATGGCAAAT CGCCAGCCCCAGC CCCAC GCCGGGGACGGCG GACTCTTTGTTGCCG TERM 1036 806282 - 806254 - G 95 -14.5 -3.53563 | opp_overlap 806255 AGACGGTCGGCGAAA GCGTCACGTCGCC ACC AGCGTCGCGACGC CGGGCGGCCCATGAC TERM 1037 806599 - 806617 + g 72 -11.7 -2.82516 | TTTTCTTCGCCCGGA TGCGCGC GCCAG GCGCGCA TCTGATCGTCCACGC kdpC 807898 - 807314 - | K+-transporting ATPase, C subunit kdpB 809955 - 807907 - | K+-transporting ATPase, B subunit TERM 1038 808499 - 808534 + g 74 -11.1 -3.30441 | gap 1, opp_overlap 808492 808491 AGAAAATCGTCCACA CCGGCT-TCGGCGGCA ATCGC TGCCGCCGTCAGGCGG TTATCGCCAGTGATC kdpA 811655 - 809976 - | K+-transporting ATPase, A subunit kdpF 811852 - 811655 - | K+-transporting ATPase, F subunit TERM 1039 811730 - 811706 - G 70 -9.3 -3.72395 | opp_overlap 811711, overlap 811711 ATAACCTAAAAGTAA GAAAACCAGCA CGA TGCCGGTTATC ACGCCTGCACTCACA TERM 1040 811725 - 811711 - G 91 -7.8 -4.89562 | opp_overlap 811711, overlap 811706 CTAAAAGTAAGAAAA CCAGCA CGA TGCCGG TTATCACGCCTGCAC TERM 1041 811858 - 811847 - G 78 -2.2 -5.14894 | AAAAAAGTATAAAAA TGGC AAAG ACCA TTATTTAACTAATGA TERM 1042 812251 - 812278 + G 70 -3.4 -4.71426 | gap 1, overlap 812253 TAAACCGGTATGGAT GGCGCAGGCTG AAAAAGC CA-CCTGCGAC TTTTATTAATCGCGA SeD_A0816 812081 - 812287 + | hypothetical protein TERM 1043 812329 - 812308 - f 85 -7.2 -5.03715 | opp_overlap 812315 ACCAGCCTGAAAAAA CCGTCAGC CGCCAC GCTGGCGG TTTTTTTATGCGCCA TERM 1044 812315 - 812329 + F 100 -11.4 -5.60993 | opp_overlap 812308 TGAAAAAACCGTCAG CCGCCA CGC TGGCGG TTTTTTTATGCGCCA TERM 1045 813031 - 813019 - g 75 -6.2 -4.63218 | CCCGGTGGAAGAAAA CGCG GTCAT CGCG CAGCTACGTCAGTTT SeD_A0817 812399 - 813820 + | deoxyribodipyrimidine photo-lyase TERM 1046 813850 - 813825 - T 100 -16.9 -2.87463 | opp_overlap 813825, overlap 813813 813812 AAGGGGCGTGATACA GGCCCGGTAGC GCAA ACTACCGGGCC TTCTGCTATCAGGAT TERM 1047 813825 - 813850 + T 100 -16.2 -3.4678 | opp_overlap 813813 813812 813825 AAGGGGCGTGATACA GGCCCGGTAG CGCAAA CTACCGGGCC TTCTGCTATCAGGAT SeD_A0818 815340 - 813859 - | inner membrane transporter YbgH TERM 1048 815377 - 815395 + H 74 -6 -4.56969 | opp_overlap 815376, overlap 815363 CTGCGGCAAGAAAGC GGCATTCT CAG ATAATGCC TTTCTTTGTGGGCTT SeD_A0819 815669 - 816412 + | NIF3 family protein SeD_A0820 816428 - 817084 + | hypothetical protein SeD_A0821 817078 - 818010 + | allophanate hydrolase, subunit 2 SeD_A0822 818000 - 818734 + | protein YbgL SeD_A0823 818856 - 819647 + | endonuclease VIII SeD_A0824 820748 - 819702 - | protein AbrB TERM 1049 819756 - 819739 - G 89 -9.1 -4.53303 | overlap 819740 TAGGTTGATATAAAA CGGGCCA CTGC TGGCCCA GTTAACAGAATGCTG TERM 1050 819755 - 819740 - G 73 -10.4 -3.315 | overlap 819739 AGGTTGATATAAAAC GGGCCA CTGC TGGCCC AGTTAACAGAATGCT TERM 1051 820881 - 820844 - R 81 -8.3 -4.55016 | opp_overlap 820848, overlap 820845 820848 AGAAAAAAGGGAAAA TGTACCGGATGGCGAGG GTTG CGTCGCCATCCGGTTGT CAATTAACGCTTCAG TERM 1052 820880 - 820845 - R 82 -11.8 -3.30569 | opp_overlap 820848, overlap 820844 820848 GAAAAAAGGGAAAAT GTACCGGATGGCGAGG GTTG CGTCGCCATCCGGTTG TCAATTAACGCTTCA TERM 1053 820848 - 820877 + r 100 -17.9 -3.42056 | opp_overlap 820848 820845 820844 AAAAGGGAAAATGTA CCGGATGGCGAGG GTTG CGTCGCCATCCGG TTGTCAATTAACGCT TERM 1054 820877 - 820848 - R 100 -17.9 -2.79535 | opp_overlap 820848, overlap 820845 820844 AAAAGGGAAAATGTA CCGGATGGCGAGG GTTG CGTCGCCATCCGG TTGTCAATTAACGCT gltA 822168 - 820885 - | citrate (Si)-synthase TERM 1055 822131 - 822146 + g 77 -4.7 -4.85433 | AGTTCAATAGCAGTG TCACC AGTAAG GGTGA TTTTTGCCTTTGTAT TERM 1056 822522 - 822532 + H 80 -5.4 -4.95155 | CCCCATAACTTTTAC GCAT TAT ATGC TTTTTCTGGTGTCGC sdhC 822908 - 823312 + | succinate dehydrogenase, cytochrome b556 subunit sdhD 823306 - 823653 + | succinate dehydrogenase, hydrophobic membrane anchor protein TERM 1057 824270 - 824235 - g 74 -10.4 -3.59979 | gap 1, opp_overlap 824261 GTGGTGTACTTCAAA GCCCGCG-CGACGGT GCTGGCG ACCGGCGGCGCAGGC CGTATCTACCAGTCC TERM 1058 824330 - 824294 - g 71 -10.2 -3.21747 | gap 1, overlap 824306 CCAGTCCACCACCAA CGCTCACATCAACACCG GTGA CGGTGTCGGTATG-GCG CTGCGTGCCGGTGTC TERM 1059 824383 - 824437 + G 81 -12.7 -3.09516 | gap 1, opp_overlap 824419 GGCAGTTCCACCCGA CCGGCATCGCCGGGGCGGGCGTGCTG GTGA CAGAAGG-CTGCCGCGGCGAAGGCGG TTACCTGCTGAACAA sdhA 823653 - 825419 + | succinate dehydrogenase, flavoprotein subunit SeD_A0829 825433 - 826152 + | succinate dehydrogenase iron-sulfur subunit TERM 1060 826479 - 826501 + F 74 -10.6 -3.25823 | opp_overlap 826469, overlap 826480 826482 AACAAGTGAACCCCG GCACGCATAC GGC GTATGCGTGG TTAGTATCCACGGCG TERM 1061 826480 - 826500 + F 83 -14.1 -2.55351 | opp_overlap 826469, overlap 826479 826482 ACAAGTGAACCCCGG CACGCATAC GGC GTATGCGTG GTTAGTATCCACGGC TERM 1062 826482 - 826498 + F 74 -10.9 -2.81547 | opp_overlap 826469, overlap 826480 826479 AAGTGAACCCCGGCA CGCATAC GGC GTATGCG TGGTTAGTATCCACG TERM 1063 827293 - 827281 - g 84 -3.4 -5.31275 | GCTGACGAGAAAAAA CGTT TCCTG AACG AACTGACCGCCGCTG TERM 1064 828124 - 828114 - g 79 -3.2 -5.1417 | CCAGAAAATTAAAAA GCAT CCG ACGC CGCGTAAAATCTACG sucA 826678 - 829479 + | oxoglutarate dehydrogenase (succinyl-transferring), E1 component sucB 829494 - 830702 + | dihydrolipoyllysine-residue succinyltransferase TERM 1065 831270 - 831249 - g 78 -5.7 -4.72846 | opp_overlap 831251, overlap 831251 GTAGAGATCGAAAAA GTCGCGGAG GAAA CCCCGCATC TGATCCATAAAGTCG TERM 1066 831915 - 831902 - g 74 -9.5 -3.73068 | TCTGGAAGGCAACAA CGCCG AACT CGGCG CGAAGAAACTGGCTG sucC 830844 - 832010 + | succinate-CoA ligase, beta subunit SeD_A0833 832010 - 832879 + | succinyl-CoA ligase [ADP-forming] subunit alpha TERM 1067 832898 - 832882 - f 77 -3.5 -5.22137 | overlap 832883 832884 AATTATAAAATAAAA CTCGCTG TTC CTGCGGG AACAGATAAATGTCC TERM 1068 832929 - 832947 + G 100 -11.7 -5.33866 | overlap 832945 GTTTTCGACATGGTT GGCCACC TTTAC GGTGGCC TTTTTTATGGCTTTA SeD_A0834 832908 - 833033 + | hypothetical protein SeD_A0835 833120 - 833245 + | hypothetical protein TERM 1069 834733 - 834760 + G 73 -9.2 -3.77607 | gap 1, overlap 834734 834749 ACTATGTTGGGGACA TCTTCGGTGCGCC GCT GGC-CATCGAAGG TTTGATGGCCTTCTT TERM 1070 834749 - 834770 + G 76 -10.9 -3.7282 | overlap 834734 834733 CTTCGGTGCGCCGCT GGCCATCGA AGGT TTGATGGCC TTCTTCCTCGAATCC cydA 834462 - 836030 + | cytochrome d ubiquinol oxidase, subunit I cydB1 836046 - 837185 + | cytochrome d ubiquinol oxidase, subunit II SeD_A0838 837200 - 837313 + | cyd operon protein YbgT TERM 1071 837348 - 837375 + G 78 -12.1 -3.21416 | gap 1, opp_overlap 837354, overlap 837354 ACTGTATGCGGTAAT GGACAAGCGCCC GTTAA GGGCGCTT-TCC TTCGTGATGGCGATA TERM 1072 837354 - 837370 + G 83 -10.8 -3.97042 | opp_overlap 837354, overlap 837348 TGCGGTAATGGACAA GCGCCC GTTAA GGGCGC TTTCCTTCGTGATGG TERM 1073 837370 - 837354 - g 73 -10.8 -3.41878 | opp_overlap 837348 837354 TGCGGTAATGGACAA GCGCCC GTTAA GGGCGC TTTCCTTCGTGATGG SeD_A0839 837313 - 837606 + | cyd operon protein YbgE TERM 1074 837652 - 837627 - f 89 -9.1 -4.58685 | opp_overlap 837627 AAACCTCCTTAAAAA TATAGGGGCTT GCAT AAGCCCATATA TTTTTACTCTCCCTT TERM 1075 837627 - 837652 + F 93 -9.1 -4.82154 | opp_overlap 837627 AAACCTCCTTAAAAA TATAGGGGCTT GCAT AAGCCCATATA TTTTTACTCTCCCTT SeD_A0840 837835 - 838239 + | acyl-CoA thioester hydrolase YbgC tolQ 838236 - 838928 + | protein TolQ tolR 838932 - 839360 + | protein TolR TERM 1076 839686 - 839673 - g 87 -8.1 -4.67556 | AGAAGAGCGTAAAAA GCTGC AACA GCAGC AAGCAGAGGAGCTGC TERM 1077 839876 - 839866 - g 85 -2.4 -5.46657 | GACGCGAAGAAAAAA GCGG AGG CCGA AGCGGCGAAAGCGGC TERM 1078 840146 - 840136 - g 83 -8.2 -4.45738 | GAGGCGAAGAAGAAA GCGG ATG CCGC GGCGGCGAAAGCAGC TERM 1079 840206 - 840181 - g 100 -13.2 -4.45738 | overlap 840196 840197 840198 GACGCTAAGAAGAAA GCGGCTGCCG AAAAAG CGGCCGCCGC AGAAGGCGTCGACGA TERM 1080 840206 - 840196 - g 87 -8.2 -4.56597 | overlap 840181 840197 840198 GCGGCTGCCGAAAAA GCGG CCG CCGC AGAAGGCGTCGACGA tolA 839425 - 840603 + | protein TolA tolB 840724 - 842019 + | tol-Pal system beta propeller repeat protein TolB pal 842054 - 842578 + | peptidoglycan-associated lipoprotein TERM 1081 842642 - 842658 + G 100 -15.1 -4.25104 | TTACTGGTTGGCATA GCGGCCC CCT GGGCCGC TTTTGCTCAGGCGCC TERM 1082 842914 - 842896 - g 76 -10.2 -3.63515 | GGGGAGCTTGAATAA TGGCGGCG CAG CGCAGCCA GCAGCTGGTGACCAG SeD_A0846 842588 - 843376 + | tetratricopeptide TPR_2 repeat protein TERM 1083 843378 - 843425 + F 90 -14.3 -3.15579 | opp_overlap 843377 TTAACGCGATGTAAT GCGTACCATGCGACCAGAAAA CGCCTT TTTTCTGGTCGCGTCGTGCGA TTCCTAAGCAGTTGA TERM 1084 843670 - 843655 - f 72 -9 -3.52941 | overlap 843652 843669 AAACGTGAAGGATAA CGTTGC GTCA GCAACG GCCCGTAGGGCGAGG TERM 1085 844134 - 844148 + F 93 -9.2 -4.84527 | opp_overlap 844134 844133 844131 ACCAATGTAAAAGAG GGCGCT GGC GGCGCC TTTTTGCTATCTGCA TERM 1086 844172 - 844198 + F 73 -10.2 -3.09834 | opp_overlap 844172, overlap 844174 844180 ATCTGCAATATGGAA GATTCGAACCTG CCG CAGGTTTGGGTC TTGCCTGATGCGCTG TERM 1087 845427 - 845380 - g 70 -9.9 -3.44848 | opp_overlap 845396 845424, overlap 845378 845382 GCGGCGCATGAAATA CAGGTTGATGCGGC-GCTACGCG AGGG CGCATTACTGCCGC-TCAACCGG ATGCTGGATTTTGCG TERM 1088 845425 - 845382 - g 74 -11.1 -3.29704 | opp_overlap 845396 845424, overlap 845380 845378 GGCGCATGAAATACA GGTTGATGCGGC-GCTACGCG AGGG CGCATTACTGCCGC-TCAACC GGATGCTGGATTTTG nadA 844357 - 845460 + | quinolinate synthetase complex, A subunit TERM 1089 846195 - 846165 - g 82 -11 -3.85698 | opp_overlap 846167 846170, overlap 846167 TCGCCTGTGGATAAA CAGCGCGCGGGAGC GAG GATCGCGCGCGCTT TCCCGTTAATGGTGA TERM 1090 846193 - 846167 - g 89 -13.6 -3.51934 | opp_overlap 846167 846170, overlap 846165 GCCTGTGGATAAACA GCGCGCGGGAGC GAG GATCGCGCGCGC TTTCCCGTTAATGGT TERM 1091 846167 - 846193 + G 89 -13.6 -3.68244 | opp_overlap 846167 846165, overlap 846170 GCCTGTGGATAAACA GCGCGCGGGAGC GAG GATCGCGCGCGC TTTCCCGTTAATGGT SeD_A0852 845485 - 846204 + | NMN family, nucleoside/purine/pyrimidine transporter SeD_A0853 847139 - 846201 - | zinc transporter ZitB TERM 1092 847227 - 847210 - R 100 -11.3 -5.54907 | opp_overlap 847209 847208 CTGACAAAATAAAAA GGAGAGC GAAA GCTCTCC CGTTATCAGACTTTT SeD_A0854 847636 - 847250 - | putative homeobox protein TERM 1093 847817 - 847831 + H 73 -2.1 -5.18357 | gap 1 TTAGATCCCATTTTT CGCTAC ATTT GT-GCG TTTTTTCCTGAATTC aroG 847955 - 849007 + | 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive TERM 1094 849082 - 849047 - T 100 -15.6 -4.57353 | opp_overlap 849051 849079, overlap 849049 GTGCAGGATAGAAAA CATATCGGTCCGGTAA CAGC CTACCGGACCGATATT GCCAATATTAATGTA TERM 1095 849080 - 849049 - T 100 -18.2 -3.89814 | opp_overlap 849051 849079, overlap 849047 GCAGGATAGAAAACA TATCGGTCCGGTAA CAGC CTACCGGACCGATA TTGCCAATATTAATG TERM 1096 849051 - 849078 + T 93 -15.7 -3.06315 | opp_overlap 849049 849047 AGGATAGAAAACATA TCGGTCCGGTA ACAGCC TACCGGACCGA TATTGCCAATATTAA SeD_A0856 849646 - 849101 - | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region SeD_A0857 850542 - 849661 - | fumarate hydratase TERM 1097 850698 - 850709 + G 74 -2.2 -4.99043 | overlap 850696 TAACTTAACCAGAGT TGCT GAGC GGCA TTTTGTTTCTCAACC SeD_A0858 850636 - 851526 + | transcriptional regulator SeD_A0859 852474 - 851527 - | transcriptional regulator TERM 1098 853956 - 853983 + G 73 -5.7 -4.49939 | TAGTTTGGTTTGTTT TATCGTTAGTA TGATTT TACTACCGATA TTTTATCCCTTCTAT SeD_A0860 852733 - 854001 + | anion transporter SeD_A0861 854090 - 854299 + | oxaloacetate decarboxylase gamma chain 3 TERM 1099 854562 - 854538 - g 88 -11.3 -4.1196 | AAGCCATGCCCAAAA CCCCGCTGCAG ATG CTGCTGCGCGG CCAGAACCTGCTCGG TERM 1100 855674 - 855658 - g 74 -7.2 -4.10453 | opp_overlap 855657 855659, overlap 855659 855668 CAAATTCCTCGAAAA CCGCCA CAACC CGGCGG CGTTTGAGCCGGTAC oadA 854315 - 856087 + | oxaloacetate decarboxylase alpha subunit SeD_A0863 856100 - 857401 + | oxaloacetate decarboxylase beta chain TERM 1101 857930 - 857949 + G 81 -12.8 -3.03124 | opp_overlap 857928, overlap 857919 CGTGCGCAGCATATC GCTGCCGG TTTA CCGGCGGC TGTTGCGGGATCAAC SeD_A0864 857520 - 858218 + | putative cytoplasmic protein TERM 1102 858381 - 858398 + F 100 -11.3 -5.76633 | TGTCAACAGCCTCAA GCGTGGA TGGC TCCACGC TTTTTTTGTCTATGG TERM 1103 858477 - 858419 - f 80 -12.6 -3.10597 | gap 2, opp_overlap 858422, overlap 858466 TTGTCTATGGAAAAC CCCCAGCCAGGCCCTGTGTCTTGATCAG GAGAT CTGATCAAGACACAGGGCTATGCC--GG AGGATATTTATTGGA SeD_A0865 858598 - 859677 + | ABC transporter permease SeD_A0866 859677 - 860453 + | ABC transporter ATP-binding protein TERM 1104 860473 - 860518 + T 86 -14.2 -3.29511 | gap 1, opp_overlap 860514 TATTGTCTGATGGCG CTGCGCTTACCCGGCCTAC CCATTGCTC GTAGGCCGGATAAG-GCAG TTATACCGCCATCCG gpmA 861296 - 860544 - | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase galM 862560 - 861520 - | galactose mutarotase galK 863702 - 862554 - | galactokinase galT 864751 - 863705 - | galactose-1-phosphate uridylyltransferase TERM 1105 863863 - 863882 + g 73 -5 -4.65747 | gap 1 GCGGATAAAAGTGCG CGTGCAACT GCC AGT-GCGCG TTTTCTTCACCGTTA TERM 1106 864156 - 864190 + g 72 -2.6 -4.83615 | opp_overlap 864154, overlap 864157 CGCTGGACATAATCC ACCAGCATTGGCGAGC GCT GCTCGGCGAAGTAGGC TTTTTGTAAACGATC TERM 1107 864452 - 864422 - G 70 -5.3 -4.38712 | gap 1, overlap 864423 864425 864427 864430 GTGATCGGGAGAAAA GCAGATCACGCGGC TGGT GCCGCGCGCGCT-C TGACAGCGCATCAGC TERM 1108 864445 - 864430 - G 72 -11.8 -2.76909 | overlap 864427 864425 864422 864423 GAGAAAAGCAGATCA CGCGGC TGGT GCCGCG CGCGCTCTGACAGCG TERM 1109 864644 - 864661 + g 83 -9.8 -4.09685 | AGACGGCGTTTCCTG CGCCCC CTGCCA GGGGCG TTTTGCGCGATGCGG galE 865778 - 864762 - | UDP-glucose 4-epimerase TERM 1110 865971 - 865957 - R 100 -12.8 -5.44119 | TTTATCCGAAAAAAA GGCGCG TTA CGCGCC TGGGAATGAAACGGA SeD_A0872 866909 - 866001 - | hypothetical protein TERM 1111 867038 - 867078 + r 73 -7.5 -4.08689 | opp_overlap 867051, overlap 867051 TCTTAATAAAAGGAG AGTGGTTCCAGAATGGCGC GCG GCGCCATTCTGATAATACA TTTAATTATTGCATC TERM 1112 867065 - 867051 - R 77 -11.4 -3.29263 | opp_overlap 867038 867051 AGAGTGGTTCCAGAA TGGCGC GCG GCGCCA TTCTGATAATACATT TERM 1113 867051 - 867065 + r 79 -11.4 -3.44794 | opp_overlap 867051, overlap 867038 AGAGTGGTTCCAGAA TGGCGC GCG GCGCCA TTCTGATAATACATT SeD_A0873 868555 - 867080 - | putative molybdenum transport ATP-binding protein ModF TERM 1114 868007 - 868036 + g 95 -14.3 -3.61517 | CAGGGTCATACCCGC CTGGTTCAACGCC GTCA GGCGTTGCGCCAG TTGTTGACGGGCGGT TERM 1115 868428 - 868394 - G 77 -11.4 -3.61398 | gap 1 CTCGCCTGTTAATAA CGGCAGTTCACCCGC CAGCGC GCGGGCGAGC-GCCG ACTTCCCGCTCCCGT SeD_A0874 869411 - 868623 - | molybdate uptake operon transcriptional repressor TERM 1116 868929 - 868945 + g 74 -7.9 -4.13767 | overlap 868917 GCTTTGCGCCGTCAG CGCGACT TTG AGCCGCG TTTTGCCGTCGGCCA TERM 1117 869460 - 869449 - H 71 -7.2 -4.18494 | overlap 869450 TATTGTGACTGAAAA GCGC GTCA GCGC AAAGCCGACCGCACA SeD_A0875 869540 - 869689 + | hypothetical protein TERM 1118 869700 - 869717 + F 100 -9.8 -5.1356 | opp_overlap 869700 GCTGATTTCCCCAAA CGCCCG CTCAGT CGGGCG TTTTTGTTACTCAAG TERM 1119 869717 - 869700 - f 75 -9.8 -3.54424 | opp_overlap 869700 GCTGATTTCCCCAAA CGCCCG CTCAGT CGGGCG TTTTTGTTACTCAAG TERM 1120 870151 - 870138 - g 85 -4.5 -5.26316 | overlap 870139 870140 GCAGCCGATAAAAAA GCGGT GGAT ACCAC GACGCGCGAAACATT modA 869856 - 870629 + | molybdate ABC transporter, periplasmic molybdate-binding protein TERM 1121 871016 - 871034 + G 95 -8 -4.89852 | opp_overlap 871000 871011, overlap 871017 GCCGCCAGAACGCTG GGCGCCGG GCG CTGGCGCG TTTTTCTGACTATCA TERM 1122 871017 - 871033 + G 77 -11.5 -3.53188 | opp_overlap 871000 871011, overlap 871016 CCGCCAGAACGCTGG GCGCCGG GCG CTGGCGC GTTTTTCTGACTATC modB 870629 - 871318 + | molybdate ABC transporter, permease protein modC 871321 - 872379 + | molybdate ABC transporter, ATP-binding protein SeD_A0879 873240 - 872380 - | phosphatase YbhA TERM 1123 873628 - 873642 + G 83 -6.4 -4.84918 | GACCCATATTTCTAC CGATCA TCA TGGTCG TTTTGTCTTTGTCGG TERM 1124 874322 - 874304 - g 71 -4.5 -4.65895 | opp_overlap 874315 TTGCTGACGGAAAAA GGCCG TTATGCCGT CGGCC AGGGGCCAATGTGGG SeD_A0880 873362 - 874357 + | 6-phosphogluconolactonase TERM 1125 874477 - 874443 - T 95 -13.5 -4.25104 | opp_overlap 874446, overlap 874444 874446 TTGCTTGCAGTAAAA CCACGGGCCGCCACA TCTGC TGCGGCGGCCCGTTT ATAAGCCTGAACCGG TERM 1126 874476 - 874444 - T 100 -17 -3.14848 | opp_overlap 874446, overlap 874443 874446 TGCTTGCAGTAAAAC CACGGGCCGCCACA TCTGC TGCGGCGGCCCGTT TATAAGCCTGAACCG TERM 1127 874474 - 874446 - T 100 -19.6 -3.13504 | opp_overlap 874446, overlap 874444 874443 CTTGCAGTAAAACCA CGGGCCGCCACA TCTGC TGCGGCGGCCCG TTTATAAGCCTGAAC TERM 1128 874446 - 874474 + T 100 -17.4 -3.87815 | opp_overlap 874446 874444 874443 CTTGCAGTAAAACCA CGGGCCGCCACA TCTGC TGCGGCGGCCCG TTTATAAGCCTGAAC SeD_A0881 875784 - 874501 - | acyl-CoA thioester hydrolase YbgC hutI 876022 - 877245 + | imidazolonepropionase TERM 1129 877457 - 877416 - g 74 -7.3 -4.10161 | gap 2, opp_overlap 877416 877431 GACGAGGGGGTAAAA CGCAATGCAGGGCGTCCCG GCGCGG CAGG-CGCCCCGGAT-GCG TTGCGTAAAGCGCTG TERM 1130 877766 - 877796 + G 85 -11 -4.0127 | overlap 877767 877776 GCCGTTTCGTCAACT GGCGCAGCTATGCG ACG CGCAGAGCCGCGCG TTTCATTATGCCTGT TERM 1131 877767 - 877795 + G 86 -14.5 -3.00039 | overlap 877766 877776 CCGTTTCGTCAACTG GCGCAGCTATGCG ACG CGCAGAGCCGCGC GTTTCATTATGCCTG hutG 877242 - 878183 + | formimidoylglutamase TERM 1132 878873 - 878885 + G 76 -9.1 -4.06419 | CGTCGTACAACCTGG TCCGC GTC GCGGA TTGTTTCTCACGCCC hutC 878228 - 878953 + | histidine utilization repressor TERM 1133 879880 - 879849 - g 71 -10.1 -3.60098 | gap 1, opp_overlap 879855 ACCCGCGAGGGGAAA GCCGTGTCCGTCGC CCTGT GCG-CGAACGCGGC GGATATCCTGCCGGA hutU 879150 - 880835 + | urocanate hydratase TERM 1134 881447 - 881459 + G 75 -6.9 -4.41348 | overlap 881448 AGGCATCAACGGCCT TCGCG CTG CGCGG TTTGTTTGAGGCACA hutH 880837 - 882357 + | histidine ammonia-lyase SeD_A0887 882918 - 882442 - | hypothetical protein bioA 884264 - 882966 - | adenosylmethionine-8-amino-7-oxononanoate transaminase bioB 884351 - 885391 + | biotin synthase TERM 1135 885426 - 885456 + G 71 -11.1 -2.97747 | gap 1, opp_overlap 885404, overlap 885403 CGATGCGCTGACGGC GCGTCGG-GCGACG GATA CGTTGCGCCGCCGC TATGTGGTGTCGCAG bioF 885388 - 886545 + | 8-amino-7-oxononanoate synthase TERM 1136 886630 - 886615 - g 71 -10.4 -3.19602 | opp_overlap 886609, overlap 886613 CTCTTTACAGCAACA CAGCGC GGAT GCGCTG CTGACGCTGTTGACA TERM 1137 886997 - 887020 + G 73 -5.2 -4.56597 | opp_overlap 887002, overlap 886999 GCATGGCAGGCCGTC GATAATCGCG CTCA CGCGAATAGC TTTTTGCCGGAAGAG bioC 886529 - 887284 + | biotin biosynthesis protein BioC bioD 887277 - 887963 + | dethiobiotin synthase TERM 1138 887985 - 888008 + F 71 -7.4 -3.90744 | overlap 887987 TTAAAAACCGCCTTC TTGCAGGATC AGAC GATCCTGCTG TTCTTTCGCCAGACC TERM 1139 887987 - 888006 + F 88 -12.2 -3.54488 | overlap 887985 AAAAACCGCCTTCTT GCAGGATC AGAC GATCCTGC TGTTCTTTCGCCAGA TERM 1140 888441 - 888427 - f 71 -10 -3.28712 | opp_overlap 888426 888425 CTGGTCTGGGGATAA CCAGCA CAC TGCTGG AATTTTACCCCGCGA TERM 1141 889373 - 889353 - g 70 -6.7 -4.14739 | CTATCTATCCCAAAA CGCACTACG TGA CGCCGCGCG AGCGTATTCTGCAGG TERM 1142 889466 - 889450 - g 74 -8 -3.9461 | GCTGGCGAATAATAA GCTGCT TGAAG AGCAGC GATTAAGCCAGCGCA uvrB 888614 - 890635 + | excinuclease ABC, B subunit TERM 1143 890653 - 890677 + F 87 -10.7 -4.17089 | ATGTGTCGATCGCCA GCGAGTCATCG TTA CCATGGCTCGC TTTTGAGAATTTCAG TERM 1144 890844 - 890807 - f 100 -16.6 -3.2653 | opp_overlap 890812, overlap 890812 TTAATCACAACTGAA GAAAATTAGCGTTGAG GCTGAA CCCAACGCTAATTTTC CCTCTCTCCTCGGCT TERM 1145 890812 - 890839 + F 83 -9.3 -4.26589 | gap 1, opp_overlap 890807 890812 CACAACTGAAGAAAA TTAGCGTTGAGG CTGAA CC-CAACGCTAA TTTTCCCTCTCTCCT TERM 1146 890839 - 890812 - f 100 -10.7 -4.73635 | opp_overlap 890812, overlap 890807 CACAACTGAAGAAAA TTAGCGTTGAG GCTGAA CCCAACGCTAA TTTTCCCTCTCTCCT TERM 1147 893106 - 893082 - g 77 -3.8 -5.05301 | gap 1 AAATAAGGATAAAAA TTGCTGAAAAT AGGG ATTTTCA-CAA ATGGTTTGCGCTGTG SeD_A0894 891125 - 893392 + | leucine-rich repeat protein TERM 1148 893423 - 893450 + T 90 -13.6 -3.40403 | gap 1, opp_overlap 893415 893423 893449 CAGAAGAGGGAGAGA GCCTGTTTAC-CC TTC GGTGTAAACAGGC TTCTGATAAGCGCAG TERM 1149 893450 - 893423 - T 85 -13.6 -2.95894 | gap 1, opp_overlap 893423, overlap 893415 893449 CAGAAGAGGGAGAGA GCCTGTTTAC-CC TTC GGTGTAAACAGGC TTCTGATAAGCGCAG SeD_A0895 894392 - 893484 - | protein YbhK TERM 1150 894432 - 894418 - H 70 -10 -3.049 | GAAGTCAAATAAGCA GCGCTA CAG TAGCGC AAGTCGCGGGTTTTC TERM 1151 895469 - 895494 + G 95 -5.9 -5.31275 | opp_overlap 895445 GATCCACCAGCTCCG CCAGCGCAGCG ATGG CCCGGCGCAGG TTTTTTGTCATCCCG moaA 894789 - 895778 + | molybdenum cofactor biosynthesis protein A moaB 895800 - 896312 + | molybdenum cofactor biosynthesis protein B TERM 1152 896348 - 896338 - g 77 -8.2 -4.09509 | ATTAACCCATATAAA CGCC GCA GGCG AAGCGCACATGGTGG moaC 896315 - 896800 + | molybdenum cofactor biosynthesis protein C moaD 896793 - 897038 + | molybdopterin converting factor, subunit 1 moaE 897040 - 897492 + | molybdopterin converting factor, subunit 2 TERM 1153 897734 - 897747 + G 71 -8.1 -3.79864 | overlap 897732 897733 TGGCTTAATTATTGC CCAGC TTGC GCTGG TGTTTGTTCTGTCGG TERM 1154 898140 - 898112 - g 72 -2.5 -4.84529 | gap 1 GCAGAAACTGAAAAA TATCGGCGAGCA AATAGA TACCCGC-GATA GCGCTAATCTGCGTA SeD_A0901 897540 - 898244 + | inner membrane protein YbhL TERM 1155 898264 - 898282 + F 100 -10.3 -5.42862 | opp_overlap 898264 AGCGATCTCTTAAAA TCCTGGC CTTGC GCCAGGA TTTTTTTAGGACTAT TERM 1156 898282 - 898264 - f 87 -10.3 -4.09864 | opp_overlap 898264 AGCGATCTCTTAAAA TCCTGGC CTTGC GCCAGGA TTTTTTTAGGACTAT SeD_A0902 898389 - 899096 + | putative integral membrane protein TERM 1157 899193 - 899223 + G 86 -9.9 -4.2558 | opp_overlap 899192 899191 899213 899214 GTGAAGCTAAAGACG TCACTCG-CGCCATT AAA AATGGCGGCGAG-GA TTTTAATAAGAAATG TERM 1158 899346 - 899358 + G 95 -5.5 -5.3104 | TTCTTGTGGGAGGTG TGTGC AGT GCGCA TTTTGTTTTTGATAA SeD_A0903 899126 - 899728 + | putative inner membrane protein TERM 1159 900211 - 900222 + T 73 -2.2 -5.252 | TTTTTCCCGCTTACA GATG AATA CGTC TTTTTTCTCAGCATA TERM 1160 900286 - 900260 - T 72 -5.9 -4.4009 | gap 1, opp_overlap 900260 TTTTACCGGATAAAA CGCGTTGT-GCT GGAA AGCGAAAACGCG TCTGCTTAAATTCAT SeD_A0906 901260 - 900298 - | inner membrane protein YbhN SeD_A0907 902501 - 901260 - | putative cardiolipin synthetase TERM 1161 902316 - 902330 + g 80 -9.2 -4.07568 | overlap 902320 902322 TACTTCGGCTTTTAC GCCGCG CTG TGCGGC TTTTAGCAGAGCGGC TERM 1162 902320 - 902351 + g 77 -3.6 -5.0133 | overlap 902316 902322 TCGGCTTTTACGCCG CGCTGTGCGGCTTT TAGC AGAGCGGCATGGAG TTTTTTACCCACCTC SeD_A0908 903256 - 902498 - | endonuclease/exonuclease/phosphatase family protein TERM 1163 902683 - 902710 + g 83 -7.6 -4.57073 | gap 1, overlap 902685 902702 TGAATATCTCCTCCA GCCCGGCCG-CGT TTA ACGGCGGGCCGGC TTTTTGCCGCCAGTC TERM 1164 903398 - 903386 - H 70 -4.8 -4.46212 | overlap 903394 TGCTTCAGGAGAAAA GCCA TGAAG TGGC AACAACGCGTTCGTG TERM 1165 903700 - 903730 + G 100 -16.8 -3.28416 | overlap 903697 TGTCTTGCTGGCGCT GGCGGGGCTGGCTA TCC TGGCCGGGCCCGCC TTGGTCTCGCTACTG SeD_A0909 903389 - 903799 + | hypothetical protein SeD_A0910 904867 - 903761 - | ABC-2 type transporter, permease protein SeD_A0911 906113 - 904983 - | inner membrane transport permease YbhS SeD_A0912 907842 - 906106 - | ABC transporter, ATP-binding protein TERM 1166 906584 - 906572 - G 79 -3.3 -5.24531 | overlap 906573 906576 ACGCCGGAGAAAAAA CGCAG GTT CTGCT CAACCGTCAGGTTGC TERM 1167 907019 - 907029 + g 74 -2.4 -5.03314 | TGACGAATATCTGCT GCGG TCG CCTC TTTTTTCAGGATCAG TERM 1168 907500 - 907481 - G 71 -6.4 -4.23104 | opp_overlap 907481 GTAAACTCCAACAAA CGGGCAAA GGTC TTTTCCCG TATCTCGCCGGTAAC SeD_A0913 908830 - 907835 - | membrane protein YbhG TERM 1169 907951 - 907965 + g 70 -7 -4.1196 | opp_overlap 907938, overlap 907944 907960 GATCGGTACGCAGAT CCGGCG TTT CGACGG TTTTCGGCGTAAATT SeD_A0914 909504 - 908830 - | transcriptional regulator, TetR family TERM 1170 911030 - 911015 - g 75 -6 -4.564 | AAGGCGAAACCAAAA CCGCGC ACAG GCGAGG GGAAACCCGCGGGCG TERM 1171 911075 - 911036 - g 81 -12 -3.60805 | overlap 911037 ACAGGCGAGGGGAAA CCCGCGGGCGACAAAGCA CGTC CGCCGCGTCGCCCGCGCA GAATCACGCCTGCCC TERM 1172 911074 - 911037 - g 79 -13.3 -2.76162 | overlap 911036 CAGGCGAGGGGAAAC CCGCGGGCGACAAAGCA CGTC CGCCGCGTCGCCCGCGC AGAATCACGCCTGCC SeD_A0915 909734 - 911095 + | putative ATP-dependent RNA helicase RhlE TERM 1173 911549 - 911535 - g 78 -2.1 -5.27779 | GGGAAGAGCAAAAAA CACTG GTGGT CAGTA CCGCTAACGTGGCGT TERM 1174 912754 - 912743 - g 85 -2.2 -5.45802 | gap 1, opp_overlap 912744 912747, overlap 912744 GGCTTAAAAGAAAAA GCCGG CGA CCG-C TTTGTGGCGCTGGAT TERM 1175 912916 - 912902 - g 79 -2.8 -5.21709 | opp_overlap 912912 912913 CTGGAGAGCAAAAAA CATCAT GGT ATGCTG GTACTGTTCGCCAGC TERM 1176 913428 - 913418 - g 70 -3.2 -4.71222 | overlap 913424 913426 ATAGTAAAACCAAAA GCAA AAC CTGC ACGCCGCCGACGGCG SeD_A0916 911303 - 913447 + | probable ATP-dependent helicase DinG TERM 1177 913430 - 913443 + F 71 -9.5 -3.24747 | opp_overlap 913426 913424 AAAGCAAAACCTGCA CGCCG CCGA CGGCG TTAATGCTGTGAGCA SeD_A0917 913477 - 914451 + | glycosyl transferase family protein TERM 1178 914478 - 914457 - Tf 100 -13.7 -5.8187 | overlap 914436 TAGCGAATAAAAAAA GCCCGTCCA GTGA CGGACGGGC AAATAAGGGTAACAA SeD_A0919 914867 - 914607 - | protein YbiJ TERM 1179 914723 - 914758 + gF 73 -6 -4.41844 | gap 1, overlap 914724 TAGCTTCCAGGCCAT CCAGCGTGGTGGC-GCC ATC GGCAGACACTACGCCGA TTTTATGCAGGTTTT TERM 1180 914724 - 914757 + gF 71 -9.5 -3.24022 | gap 1, overlap 914723 AGCTTCCAGGCCATC CAGCGTGGTGGC-GCC ATC GGCAGACACTACGCCG ATTTTATGCAGGTTT SeD_A0918 914836 - 914949 + | hypothetical protein SeD_A0920 915418 - 915152 - | C4-type zinc finger protein, DksA/TraR family TERM 1181 915489 - 915477 - H 80 -5.5 -5.0538 | opp_overlap 915475 915477 CGTCAGGTGAAAAAA TCGCA TCG CGCGA TCTTTTCAGACCATG TERM 1182 916301 - 916315 + G 80 -9.2 -4.1552 | GAGCTATGGTGTGAA GGCGGC GAA GTCGCC TTTATTAAAAAAATG SeD_A0921 915623 - 916549 + | putative methyltransferase YbiN SeD_A0922 918768 - 916546 - | transporter, small conductance mechanosensitive ion channel TERM 1183 916786 - 916761 - G 95 -14.1 -3.47349 | overlap 916754 TCGTTAAACCGACAA TACCGGCGAAC GTGG GTTCGCCGATA ATCAGCCCGCGAATA TERM 1184 917808 - 917820 + g 74 -3.3 -4.86385 | GACTTAATAAATGTT GCGTA ATC TCCGC TTTGTTTTTAAAGAT TERM 1185 918623 - 918636 + g 100 -3.7 -6.09888 | overlap 918622 918621 AGTACGTCAGCCAGG GCCGC ATAG GCCGC TTTTTTTTGTTCAGG TERM 1186 918764 - 918747 - G 84 -2.7 -5.39721 | gap 1, overlap 918748 CCAGTAGACAAAAAA GGATGAAC AGG GTCCA-CC GCATGACTCCTCCAG TERM 1187 918851 - 918882 + r 79 -12.2 -2.87211 | TGGGACTATTCCATG ATGCCCTTCCTGCC GCAG GGCTGGAAGGGCGA TATCTCAGGAGACGT glnQ 919609 - 918887 - | glutamine ABC transporter, ATP-binding protein TERM 1188 919011 - 919023 + g 70 -9.1 -3.76224 | CGTGAGGCGACTTTT TCGGC AAA GCCGA TTTCGTGAGTGACAA glnP 920265 - 919606 - | glutamine ABC transporter, permease protein TERM 1189 920393 - 920353 - R 73 -9.9 -3.40597 | gap 3, overlap 920351 920354 TCCGTCACGGAAAGA GCT-GTAGGCCCGGTGAGCG TCCT CACT-ACCGGGCC-ACAAGC CAACATCAGGTCGTT glnH 921155 - 920409 - | glutamine ABC transporter, glutamine-binding periplasmic protein TERM 1190 920838 - 920858 + g 76 -3.2 -5.06451 | opp_overlap 920838 ACCGCTTTTGTAATA GCCATCGG AAAAG TCGATCGC TTTTTTACGCTCGTC TERM 1191 921495 - 921477 - R 76 -7.4 -4.19953 | opp_overlap 921477 TATTTAAGTGCAAAA CCCCTG TGCCAGG CAGGGG TATAGGGATGACTTA SeD_A0926 922135 - 921632 - | DNA protection during starvation protein SeD_A0927 922409 - 922278 - | hypothetical protein SeD_A0928 923298 - 922438 - | threonine/homoserine efflux transporter RhtA TERM 1192 922956 - 922937 - G 74 -2.8 -4.9138 | gap 1, overlap 922938 922941 ACGACCCAAATAAAA TC-TACCGG CCG CCGGGATGA AAACAGCGCGACCGC ompX 923652 - 924167 + | outer membrane protein X TERM 1193 924190 - 924207 + T 100 -9.1 -5.47218 | opp_overlap 924184 924190 GGTGAAAATGAAAAA TCCGCCT TTCG GGGCGGA TTTTTTTGCCTGAAA TERM 1194 924207 - 924190 - T 91 -8.4 -5.0925 | opp_overlap 924190, overlap 924184 GGTGAAAATGAAAAA TCCGCC TTTCGG GGCGGA TTTTTTTGCCTGAAA SeD_A0930 925809 - 924229 - | inner membrane protein YbiP TERM 1195 925295 - 925284 - G 86 -7.2 -4.74103 | TGGCGAAGCGAAAAA CCGG ATAG CCGG TATCAATAACCTTAA TERM 1196 925780 - 925746 - G 87 -13.4 -3.18433 | overlap 925741 925744 925742 ACTGTAAAAAGTAGA GGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCG AGAAGTGAATCGATA SeD_A0931 925810 - 925938 + | hypothetical protein TERM 1197 926037 - 926011 - f 100 -8 -5.77632 | overlap 926014 926015 AAAACCACAAAAAAA CAGGGGAAATGG GCG CCATTTCCGTTG AGGATGCAAAATAAA TERM 1198 926033 - 926015 - f 76 -11.8 -2.54537 | overlap 926014 926011 CCACAAAAAAACAGG GGAAATGG GCG CCATTTCC GTTGAGGATGCAAAA TERM 1199 926076 - 926049 - f 91 -11.4 -4.21194 | opp_overlap 926049 926053, overlap 926053 GTTGAGGATGCAAAA TAAAGCGGCG TACCGCAC CGCCGCTTTA TTTCGTGGAAGGGTT TERM 1200 926049 - 926076 + F 86 -11.4 -3.73072 | opp_overlap 926049 926053, overlap 926053 GTTGAGGATGCAAAA TAAAGCGGCG TACCGCAC CGCCGCTTTA TTTCGTGGAAGGGTT TERM 1201 926072 - 926053 - f 82 -7.8 -4.6951 | opp_overlap 926049 926053, overlap 926049 AGGATGCAAAATAAA GCGGCG TACCGCAC CGCCGC TTTATTTCGTGGAAG TERM 1202 926053 - 926072 + F 79 -7.8 -4.49556 | opp_overlap 926053 926049, overlap 926049 AGGATGCAAAATAAA GCGGCG TACCGCAC CGCCGC TTTATTTCGTGGAAG SeD_A0933 926388 - 926861 + | transcriptional regulator MntR TERM 1203 927477 - 927491 + G 76 -2.8 -5.06414 | overlap 927478 TGGTGTGGAGTTGCT TGGCAT TAT ATGTCG TTTTTCTTACCGCGC SeD_A0934 926858 - 927970 + | citrate transporter family protein TERM 1204 927999 - 927973 - T 100 -19.6 -3.03243 | opp_overlap 927963 927959, overlap 927976 ACTGATGCCGTAAGA GAAGCCCGATAG TGT CTATCGGGCTTC GCAGGCAGAGTCTGT TERM 1205 927996 - 927976 - T 100 -15.5 -3.66288 | opp_overlap 927963 927959, overlap 927973 GATGCCGTAAGAGAA GCCCGATAG TGT CTATCGGGC TTCGCAGGCAGAGTC SeD_A0935 928934 - 928014 - | ErfK/YbiS/YcfS/YnhG family protein TERM 1206 928194 - 928217 + g 74 -7.4 -4.15106 | gap 1 CACCTCAATGTAACG GCTACCGTCCG GCT CGG-TGGTGGC TTTTACCGGTTCATC TERM 1207 928486 - 928496 + g 85 -4.6 -5.15969 | overlap 928483 GCCGTAGGCGTCCAG GTCG GAC CGGC TTTTTTACGTTCAAC TERM 1208 930318 - 930295 - g 74 -7.4 -4.10453 | overlap 930296 TAAATGGTCGGAAAA CGCGCGTATT GGTT ACTACGCGCA GGACCACGAATATGA SeD_A0936 929153 - 930745 + | ABC transporter, ATP-binding protein TERM 1209 930750 - 930786 + F 77 -10.9 -3.17956 | opp_overlap 930746 930750, overlap 930752 GGATCGAGTAAGTTA TTGTCTGTAACCCCGAT AGC GTCGGGGTTACAGAATG TTAATAAGGTAATTT TERM 1210 930752 - 930784 + F 100 -15.7 -3.1478 | opp_overlap 930750 930746, overlap 930750 ATCGAGTAAGTTATT GTCTGTAACCCCGAT AGC GTCGGGGTTACAGAA TGTTAATAAGGTAAT TERM 1211 932118 - 932101 - g 93 -12.7 -3.92075 | opp_overlap 932100 ATGCTCATTGAGAAA TCGGGGC AATT GCCCCGA CTCTCGTTAAAGTGT SeD_A0939 932086 - 932256 + | hypothetical protein SeD_A0941 934317 - 933052 - | putative cytoplasmic protein SeD_A0942 934463 - 934576 + | hypothetical protein SeD_A0943 934579 - 935388 + | sugar phosphatase SupH TERM 1212 935410 - 935393 - T 77 -11.3 -3.14211 | opp_overlap 935395 ATCCCTTCTGATTAA CAGGCCT GCGC AGGCCTG TTAAACGTAGCGCCA SeD_A0944 937898 - 935466 - | formate C-acetyltransferase 3 TERM 1213 936150 - 936164 + g 80 -4.2 -5.00616 | TTGACCGATAACGCC CTGTTC GAA GACCAG TTTTTTCACGGCGGC TERM 1214 936556 - 936568 + g 76 -10.5 -3.64703 | CGATAACCCCATTTC CCGCC GAC GGCGG TTTCGATACAGCCGA SeD_A0945 938803 - 937904 - | glycyl-radical enzyme activating protein TERM 1215 939037 - 939055 + r 71 -7.4 -3.98915 | opp_overlap 939037 TTATCTGTTGATACA GCACGG CCATAAA CCGTGC TTTGGTATGTTTATC moeB 939830 - 939081 - | molybdopterin synthase sulfurylase MoeB TERM 1216 939536 - 939573 + g 95 -14.9 -3.64703 | gap 1 TAATGGTAATATGCG GGTTGATTCGCGCCAGCG CGT CGCGGGCG-GACTCAACC TTTGGCTGCCCGACC SeD_A0947 941065 - 939830 - | molybdopterin biosynthesis protein MoeA SeD_A0948 941269 - 942210 + | putative L-asparaginase TERM 1217 942248 - 942283 + G 74 -10.4 -3.53012 | opp_overlap 942279 GATGAACTGGATAGC CGCGATGTTCTGTCCG TCAG TGGCCTGAATATCGCG TTTCACCACGAAGGG TERM 1218 943859 - 943871 + G 71 -4.7 -4.59773 | overlap 943858 ATTGTTGAAATGGGG CCGCG GCG CGCCG TTTTTGAAAATCCGC SeD_A0949 942221 - 944092 + | glutathione import ATP-binding protein GsiA TERM 1219 945605 - 945632 + G 70 -9.1 -3.71649 | ACAGTAAAAATTTGA CCGGTTTCTGG ATTATG CCGGATACCGG TTTCAGCTTTGACGA SeD_A0950 944125 - 945663 + | glutathione-binding protein GsiB TERM 1220 946128 - 946141 + G 83 -8.1 -4.42464 | GGTAGGAATGACGCT TGCCG TGAC CGGCA TTTCTTTCCCGGCTT gsiC 945724 - 946644 + | glutathione ABC transporter, permease protein TERM 1221 947282 - 947316 + G 80 -5.1 -4.88918 | gap 1, opp_overlap 947289 GACGATTTTGTTTAG CCATATATTGCCGGGA ACGG TCTCGTCAAT-TGTGG TTTTCTTTACGATGC SeD_A0952 946647 - 947558 + | glutathione transport system permease protein GsiD SeD_A0953 948974 - 947649 - | hypothetical protein SeD_A0954 949001 - 949135 + | hypothetical protein TERM 1222 949429 - 949454 + G 70 -5.3 -4.49556 | gap 1 CGCGCTGCGCCGTGC CGAAGGCGCGCT TGC AGC-CGCCGCCG TTTGTTTAATGAGCG SeD_A0955 949205 - 949588 + | biofilm regulator BssR TERM 1223 950493 - 950478 - g 70 -3.2 -4.81685 | AGTAATGATGAAAAA GTACTG ATTG CTGTAC GTGCAAAAATTGTAA SeD_A0956 950301 - 950816 + | putative cytoplasmic protein SeD_A0957 950839 - 951588 + | electron transfer flavoprotein subunit beta TERM 1224 951917 - 951901 - g 74 -2.1 -5.00616 | CTCTTTTGGAAAAAA CTGTGCG CCA CGCTTAG CAGCAAAACTTGATG SeD_A0958 951599 - 952552 + | electron transfer flavoprotein subunit alpha SeD_A0960 952846 - 954009 + | acyl-CoA dehydrogenase domain protein TERM 1225 954359 - 954371 + F 72 -4.9 -4.59212 | CCATTTCATCTGTTT TATCA CTA TGATA TTTATTTCATTGGTT SeD_A0961 954457 - 956142 + | electron transfer flavoprotein-ubiquinone oxidoreductase SeD_A0962 957038 - 956148 - | transcriptional regulator, LysR family TERM 1226 956307 - 956330 + g 73 -6.1 -4.41047 | gap 1, opp_overlap 956307 ACGGGATGCAGCAGA GTGAGGCATT ATACC AATGCC-CAC TTTTGCTTCAACCAT TERM 1227 957299 - 957311 + r 80 -5.5 -5.00616 | GGTCATCAGGTTAAC CCGTT TAC AGCGG TTTTTTCAGCCCCGG SeD_A0963 957728 - 957303 - | citrate transporter family protein TERM 1228 957583 - 957572 - G 70 -3 -4.76191 | AGACAGGAAAATAAA GTTT TACA AAAC CGATCAACTTATCCA TERM 1229 958533 - 958553 + r 71 -10.5 -2.70946 | overlap 958532 TATATCAGCGACGTT TTTGTGCCG TGA CGGCATAAA CTGTTTATCGGCGCG SeD_A0966 959389 - 958763 - | glutathione S-transferase family protein TERM 1230 960423 - 960441 + G 77 -7.4 -4.2828 | CTGTCGTGCTGGGGG CGAAAACG GAC CGTATTCG TTTTAATGAGTCAGA SeD_A0967 959555 - 960835 + | D-alanyl-D-alanine carboxypeptidase DacC TERM 1231 960840 - 960879 + T 81 -12.8 -3.18383 | gap 1, opp_overlap 960841 960842, overlap 960841 GGTTCTCGTAAAATA AC-TCCGTTGCCGGGTGCG CGT CGCATCCGGCTACGGGCGG TTAATACATCAGAGT TERM 1232 960876 - 960841 - T 100 -15.4 -4.17048 | gap 1, opp_overlap 960840 960841, overlap 960842 GTTCTCGTAAAATAA CTCCGTTGCCGGGTGCG CGT CGCATCCGGCTACGG-G CGGTTAATACATCAG TERM 1233 960841 - 960878 + T 90 -16.3 -2.50816 | gap 1, opp_overlap 960841 960842, overlap 960840 GTTCTCGTAAAATAA C-TCCGTTGCCGGGTGCG CGT CGCATCCGGCTACGGGCG GTTAATACATCAGAG TERM 1234 960876 - 960842 - T 93 -15.6 -3.09908 | opp_overlap 960841 960840, overlap 960841 TTCTCGTAAAATAAC TCCGTTGCCGGGTGCG CGT CGCATCCGGCTACGGG CGGTTAATACATCAG SeD_A0968 961638 - 960880 - | deoxyribose operon transcriptional repressor TERM 1235 961651 - 961696 + r 88 -5.5 -5.54264 | gap 1, opp_overlap 961659 961662, overlap 961659 961662 CATAGTTCCCCTGGA GAGTTAAAT-AAGCGCTCCGCA CCA TACAGAGCGCTTAATATTACTC TTTTTTTCGCTATTT TERM 1236 961687 - 961659 - R 100 -14.7 -3.70902 | opp_overlap 961651 961659 961662, overlap 961662 CCCTGGAGAGTTAAA TAAGCGCTCCGCA CCA TACAGAGCGCTTA ATATTACTCTTTTTT TERM 1237 961659 - 961687 + r 71 -10.3 -2.62118 | opp_overlap 961659 961662, overlap 961651 961662 CCCTGGAGAGTTAAA TAAGCGCTCCGCA CCA TACAGAGCGCTTA ATATTACTCTTTTTT TERM 1238 961684 - 961662 - R 95 -12 -3.98913 | opp_overlap 961659 961651 961662, overlap 961659 TGGAGAGTTAAATAA GCGCTCCGCA CCA TACAGAGCGC TTAATATTACTCTTT SeD_A0969 962318 - 961710 - | putative undecaprenyl-diphosphatase YbjG TERM 1239 962653 - 962679 + G 74 -2.9 -4.86133 | gap 1, opp_overlap 962650 ATCGTTTACAATCAG GCGGCAGGCTGG GACG TCAGGC-GCTGC TTTTTCCTCTCTGTC TERM 1240 963301 - 963284 - g 81 -4 -5.24129 | GCTGGTGATAAAAAA CCGGCG GTTTGT CGCAGG GGCGTTAGCTCTGGG SeD_A0970 962631 - 963863 + | multidrug resistance protein MdtM SeD_A0971 964732 - 963917 - | phosphatase YbjI TERM 1241 964353 - 964363 + g 77 -8.2 -4.10161 | opp_overlap 964349 964352 CGATGATAATACATT GCCG CAA CGGC TTTTAACGCATCGTC TERM 1242 964388 - 964403 + g 86 -6.8 -5.00616 | ATCGTCGTAGCGTTT CAGCGT GTAG GCGCTG TTTTTTCCACAGGCG SeD_A0972 965940 - 964729 - | inner membrane protein YbjJ TERM 1243 966026 - 966045 + H 100 -10.8 -5.03314 | TCATACTTCGTTGTG CAGACAGT TTTT ACTGTCTG TTTTTTCAGCGTAAG SeD_A0973 966108 - 966728 + | transcriptional regulator, TetR family SeD_A0975 968530 - 966845 - | putative transporter TERM 1244 967428 - 967416 - G 75 -4.1 -4.90778 | opp_overlap 967416 TGGATCGAAATAAAA CCAAT GCG ATCGG CGATGGTTTTTACGC TERM 1245 967588 - 967598 + g 71 -4.6 -4.57341 | overlap 967572 967571 967573 967593 CGAGGCGGCGACCGA CCGC ATT GTGG TTTTTCACCACAATT TERM 1246 967593 - 967611 + g 74 -7.5 -4.20516 | overlap 967573 967588 CGGCGACCGACCGCA TTGTGGT TTTTC ACCACAA TTTCTTCCGTCACGA TERM 1247 968943 - 968958 + G 78 -2.5 -5.18726 | TATTTTTTACGTTGC CTGGT GCGGTG GCCAG TTTTTGTTCTCACCG SeD_A0976 968876 - 969178 + | inner membrane protein YbjM TERM 1248 969206 - 969170 - T 90 -7.1 -5.41143 | overlap 969172 CACCGGCGAAAAAAA CGCCGATAGCGCCCTCC GTC AGAGGGCGTTGCCAGAG CAATCAGGCGAAAAG grxA 969473 - 969210 - | glutaredoxin, GrxA family TERM 1249 969741 - 969780 + G 73 -10.7 -3.38604 | gap 1, opp_overlap 969764, overlap 969754 969758 GCTTAATCATTACCT TACGCT-GCCCGCGCCGT TCAAT ACGCCGCTGGCTGGCGTA TTGATGGTTTTCCTC TERM 1250 969754 - 969787 + G 84 -9 -4.26076 | gap 1, opp_overlap 969764, overlap 969741 969758 CTTACGCTGCCCGCG CCGTTCAATACGCCG CTGGC TGGCGTATTG-ATGG TTTTCCTCGGCGTCG TERM 1251 969758 - 969784 + G 76 -11.7 -3.13504 | opp_overlap 969764, overlap 969741 969754 CGCTGCCCGCGCCGT TCAATACGCCG CTGGC TGGCGTATTGA TGGTTTTCCTCGGCG SeD_A0978 969643 - 969933 + | putative inner membrane protein nfsA 969917 - 970639 + | oxygen-insensitive NADPH nitroreductase TERM 1252 970649 - 970669 + F 73 -7.5 -4.19276 | CGCTAAAACCTGCGG GCCAGTGTA TGA TACGCGGGC TTTTCAGGGTTTTCA rimK 970697 - 971599 + | ribosomal protein S6 modification protein SeD_A0981 971695 - 972171 + | putative cytoplasmic protein TERM 1253 972179 - 972219 + F 88 -3.4 -5.67063 | gap 2, opp_overlap 972185 972188, overlap 972189 972190 TTCACTGATCCCTCC CGATAATCAGGCAGTCGC TGCCAGC GCGGCTG-CTGTTTA-CG TTTTTTTATGCTGCC TERM 1254 972790 - 972808 + G 83 -7.3 -4.57569 | GCCAGTTTTCTTGAG CGCCAGC TCACC GCGGGCG TTTTTCAGCCGCTGG SeD_A0982 972517 - 973632 + | putrescine-binding periplasmic protein potG 973720 - 974853 + | putrescine ABC transporter, ATP-binding protein PotG TERM 1255 975590 - 975604 + G 74 -4.9 -4.82901 | opp_overlap 975577, overlap 975585 AAGGCGGAATCATCG CCGGC TCGAT GCTGG TTTTTATCCCGGCGG TERM 1256 975679 - 975693 + G 71 -4.2 -4.65895 | overlap 975680 ATCATGATTGGTCGC GTCCTG TGG CAGGAG TTTTTCAATAACCGC SeD_A0984 974863 - 975816 + | putrescine transport system permease protein PotH TERM 1257 976106 - 976121 + G 71 -7.6 -3.96148 | TGGACGATTTCGCGG CGCAAA CGGC TTTGCG TTTATGATCACCGCG SeD_A0985 975813 - 976658 + | putrescine transporter TERM 1258 976688 - 976712 + F 71 -7 -4.07568 | overlap 976691 TCCACTATGGTAATG CGTTGCCGCG CGGGT CGCGGCATCA TTTTCAGGGAAGACA TERM 1259 976691 - 976709 + F 78 -11.7 -3.08032 | overlap 976688 ACTATGGTAATGCGT TGCCGCG CGGGT CGCGGCA TCATTTTCAGGGAAG SeD_A0986 976732 - 977205 + | inner membrane protein YbjO rumB 977248 - 978375 + | 23S rRNA (uracil-5-)-methyltransferase RumB TERM 1260 978478 - 978436 - f 71 -7.1 -4.16305 | opp_overlap 978434 978436 978439, overlap 978439 ATCCATAAATAATAA TAACCATGATCGAGCGA TAAAAAACT CCGATCGATCGTGGTTA TATATTACCCTATTT SeD_A0988 978670 - 980013 + | ascorbate-specific PTS system enzyme IIC SeD_A0989 980043 - 980363 + | putative inner membrane protein TERM 1261 980821 - 980803 - g 77 -4.4 -4.96501 | TTCCACAAAAACAAA CCGGAGGC GGC GTTTCCGG GCTATGGCGTCATGA TERM 1262 981832 - 981812 - g 75 -3.9 -4.93877 | overlap 981815 TTTGATGAAAGAAAA TGATGCTCC GGC GGAGCAGTA TCGCCGTCTGGGTCT TERM 1263 981829 - 981815 - g 70 -10 -3.34291 | overlap 981812 GATGAAAGAAAATGA TGCTCC GGC GGAGCA GTATCGCCGTCTGGG SeD_A0990 980373 - 981860 + | sulfatase TERM 1264 981923 - 981940 + T 72 -9.1 -3.59262 | AGTATTAGTCCGAAT CGCCTGT TGAT GCAGGCG TTTGAAACTGTAGAA artJ 982799 - 982068 - | arginine ABC transporter, periplasmic arginine-binding protein ArtJ TERM 1265 982943 - 982917 - R 100 -10.9 -5.68039 | opp_overlap 982915 982914 AAATGGATAAAAAAA GACGGACAGGT TAACC ACTTGTCCGTC AGATTTATTCAAAAT artM 983704 - 983036 - | arginine ABC transporter, permease protein ArtM TERM 1266 983576 - 983546 - G 74 -8.3 -3.92542 | CGTACCGGTAAACAA CGTGATATAGCCG CGCAC CAGCCACACCACG AACGGCGTTTTTAGT TERM 1267 983640 - 983611 - G 70 -2.7 -4.6902 | overlap 983616 GGATAATGGTAAAAA CTAACGCCAGCAC CAAA GCGACGGCAATAG AAGCCACGGTCAGCG artQ 984420 - 983704 - | arginine ABC transporter, permease protein ArtQ artI 985158 - 984427 - | arginine ABC transporter, periplasmic arginine-binding protein ArtI artP 985904 - 985176 - | arginine ABC transporter, ATP-binding protein TERM 1268 986092 - 986062 - R 71 -7.7 -3.97709 | gap 1, opp_overlap 986062 AGTAGGTAAGAAGAA TTGTC-GGCATCCC GGGC AGAATGCCAGACAA TTTACGGGGTTATGG SeD_A0996 986649 - 986134 - | YbjP SeD_A0997 986777 - 987100 + | hypothetical protein TERM 1269 987684 - 987699 + G 73 -5.4 -4.55287 | gap 1, overlap 987678 TGGCGCCTGGCCTGA CGCC-CA GCG TGTGGCG TTTTATCTGGCTGGA SeD_A0998 987097 - 987927 + | N-acetylmuramoyl-L-alanine amidase AmiD SeD_A0999 988937 - 987924 - | NAD dependent epimerase/dehydratase family protein SeD_A1000 990466 - 989033 - | NAD dependent epimerase/dehydratase family protein TERM 1270 989553 - 989566 + g 86 -3.8 -5.40014 | TCGTAGCCCCAGTCG CTGG AGTTCA CCAG TTTTTCTTCTTCTTT TERM 1271 989668 - 989689 + g 77 -8.1 -4.15565 | gap 1 CGGCCAGCAAATCGT GCCTTAA-CC CCT GGATTAAGGC TTTTGCGGTAGTCGG ltaE 991478 - 990477 - | low-specificity L-threonine aldolase TERM 1272 991159 - 991214 + g 83 -12.6 -3.16039 | GGCAGCGTACCGTCC GC-GGCGGCGTCGATGG-GCTGCGGCTG AATG CTGCCG-AGCACCGCCG-CGCCGCCAGC TTCATAGAGATAATT poxB 993235 - 991517 - | pyruvate dehydrogenase TERM 1273 992631 - 992656 + g 76 -3.2 -5.09173 | overlap 992637 ATCAATGCGATATTG CTGGAGTAGC GCAGCA GTTGCGCCAG TTTTTTCAGCTCTTC TERM 1274 993066 - 993021 - G 83 -12.7 -3.25823 | opp_overlap 993040 993065 CCCGGTCCACATGAA CCGGCGCACACTGC-CAGCTC GCCGGT AAGCTGCGCT-TGTGCGCCGG CGGCGAAAGCGGCGA TERM 1275 993373 - 993345 - R 73 -11 -2.7464 | gap 1, opp_overlap 993345, overlap 993333 993332 993344 AAGCGAGCGGCAAAT CGCCCGGT-AGCG CTGA CGCTTACCGGGCC TATGATGGAACGTTT TERM 1276 993345 - 993373 + r 74 -11 -2.79312 | gap 1, opp_overlap 993333 993332 993345 993344 AAGCGAGCGGCAAAT CGCCCGGT-AGCG CTGA CGCTTACCGGGCC TATGATGGAACGTTT hcr 994365 - 993394 - | NADH oxidoreductase hcr hcp 996026 - 994374 - | hydroxylamine reductase TERM 1277 995832 - 995820 - G 85 -6.9 -4.83615 | overlap 995821 CAGCGTGGAGAAAAA CGCGC GCG GCGCA AAGTTATCAACGTCG SeD_A1005 997069 - 996170 - | hypothetical protein TERM 1278 996482 - 996465 - G 70 -9.1 -3.62572 | opp_overlap 996470 996475 GAGTACCAGCCGAAA CCTGACG CCAT CGCCAGG GCGGTTTTTAGCGGT TERM 1279 996909 - 996889 - G 84 -6.1 -4.99435 | CGGAATAATGAAAAA TCGCCACCA GAT TACTGGCGA GGTTATCCAAAAACG TERM 1280 997632 - 997656 + G 70 -5 -4.42386 | gap 1, overlap 997633 GCGAATGCGGCGCCG ATG-GCAGCGT GATG ACGCTGCGCAG TTTTCTCAATAGCGA TERM 1281 997747 - 997759 + G 80 -10.5 -3.87641 | overlap 997755 GCCAGTGCTACGTTT GCGCG ATG CGCGC TTTATGCGACGTATT TERM 1282 998050 - 998039 - g 71 -7.2 -3.93695 | CGGATGATCGACAAA CCGG GCAG CCGG TCGCATCGGGTGATC TERM 1283 998342 - 998377 + G 70 -9 -3.73224 | gap 1, opp_overlap 998350, overlap 998355 CCGGGCGGGTTAAGC GCGGAAGATGGACGGCG CAT CGCCTTTCATAT-CCGC TTTAATCGCGCGTCA TERM 1284 998355 - 998365 + G 71 -8.2 -3.85114 | opp_overlap 998350, overlap 998342 GCGCGGAAGATGGAC GGCG CAT CGCC TTTCATATCCGCTTT SeD_A1006 997271 - 998929 + | hypothetical protein SeD_A1007 999876 - 998926 - | hypothetical protein TERM 1285 998981 - 999000 + g 85 -4.2 -5.14965 | gap 1 TCGAGTAACGCATAG CGGCGGCGA TAC TCGGC-CCG TTTTTTACTGGCGAT TERM 1286 1000421 - 1000393 - g 76 -10.3 -3.64822 | AGCCGCTGAGTTAAA GCTGGCGCG GGTTACGCTGG CGCGCCAGC AGCAGTTAGCTAAGA SeD_A1008 1000022 - 1001140 + | macrolide-specific efflux protein MacA TERM 1287 1002972 - 1002987 + G 86 -6.8 -5.0916 | overlap 1002973 CGGTTTTTCACTGAC TGCGCT GGCG AGCGCG TTTTTATGTTCGACG SeD_A1009 1001137 - 1003083 + | macrolide export ATP-binding/permease protein MacB TERM 1288 1003176 - 1003156 - g 100 -12.6 -5.27335 | opp_overlap 1003156 GGCGTTAAATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTCCTGGAT TERM 1289 1003156 - 1003176 + G 95 -12.6 -4.21462 | opp_overlap 1003156 GGCGTTAAATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTCCTGGAT SeD_A1010 1003115 - 1003258 + | hypothetical protein cspD 1003434 - 1003213 - | cold shock domain protein CspD TERM 1290 1003287 - 1003305 + g 70 -8.8 -3.63305 | opp_overlap 1003288, overlap 1003288 CCTGGTGGACATCAA ACCGGACA GAC TGTCCGGC TTTAAGCGTTCTGTA TERM 1291 1003304 - 1003288 - G 86 -12.3 -3.83026 | opp_overlap 1003287 1003288 CTGGTGGACATCAAA CCGGACA GAC TGTCCGG CTTTAAGCGTTCTGT TERM 1292 1003288 - 1003304 + g 72 -12.3 -2.77501 | opp_overlap 1003288, overlap 1003287 CTGGTGGACATCAAA CCGGACA GAC TGTCCGG CTTTAAGCGTTCTGT TERM 1293 1003870 - 1003880 + G 75 -6.8 -4.45738 | opp_overlap 1003870 TCAATGATGATTACA CTCC GAT GGAG TTTGTTATTGACGTG TERM 1294 1003999 - 1003968 - g 71 -8 -3.79043 | gap 1, overlap 1003963 CACTATCAAGGCAAA GCCATCTGCGGCG TGTTCAC CGCCG-AGGTGGC GGAAACCAAAGTGGC clpS 1003758 - 1004078 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1295 1004781 - 1004770 - g 74 -7.2 -4.07568 | CCGGCGTCGGCAAAA CGGC GATT GCCG AAGGGCTGGCCTGGC TERM 1296 1005049 - 1005033 - g 73 -9.4 -3.7795 | GCAAATCTGATTAAA CCGCTG CTTTC CAGCGG CAAGATCCGGGTGAT clpA 1004109 - 1006385 + | ATP-dependent Clp protease ATP-binding subunit ClpA TERM 1297 1006409 - 1006426 + T 100 -9.8 -5.40072 | opp_overlap 1006409 TCACTGCCGTACAAA CCGGGC CTTAGC GCCCGG TTTTTTTACGCCGGC TERM 1298 1006426 - 1006409 - T 80 -9.8 -3.86346 | opp_overlap 1006409 TCACTGCCGTACAAA CCGGGC CTTAGC GCCCGG TTTTTTTACGCCGGC SeD_A1014 1007334 - 1006957 - | phage integrase TERM 1299 1007492 - 1007473 - R 93 -10 -4.61199 | opp_overlap 1007473 1007471 AGTTTAGATACAAAA GCCCGTAC TTTC GTACGAGC TCTTTCTTGAATATG TERM 1300 1007735 - 1007712 - R 95 -13.2 -3.69364 | gap 1 ATGCAATAGACATAA TCCCCGC-CCA AAC TGGCGCGGGGA GGCAAATTAGCGCTG SeD_A1016 1008419 - 1007742 - | SlsA SeD_A1017 1009299 - 1008439 - | pirin protein TERM 1301 1008466 - 1008492 + g 74 -7.3 -4.09455 | opp_overlap 1008470 AAAACGGCCGGAGTT GAAATCGCGGA CTGCT TCTGCGATCTC TTGTTTCGTGTTCAT TERM 1302 1009107 - 1009134 + g 85 -7 -4.8622 | gap 1, opp_overlap 1009106 1009107, overlap 1009106 TCACGGTCTCGAAAC CGCGGTG-TGG ATGCTCC CCAACGCCGCG TTTTTCATTACCCGG SeD_A1018 1009408 - 1010319 + | transcriptional regulator, LysR family TERM 1303 1010357 - 1010373 + T 76 -7.9 -4.36914 | opp_overlap 1010357 AATGGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTATCCAGCCGCC TERM 1304 1010373 - 1010357 - T 100 -10.1 -5.10497 | opp_overlap 1010357 AATGGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTATCCAGCCGCC infA 1010628 - 1010410 - | translation initiation factor IF-1 TERM 1305 1010973 - 1010926 - R 82 -2.8 -5.46657 | gap 1, overlap 1010927 CACCCCAATAAAAAA TGTGCCGAAAACATTCACTTCCG GGG CAAAAAT-AATGTCCGCGGCACC CAAAAACGGGAGGCC aat 1011644 - 1010940 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1306 1011142 - 1011131 - G 74 -2.2 -5.05782 | gap 1, opp_overlap 1011132, overlap 1011132 ATTCAGCGCAAAAAA CCAGC AGT GC-GG TTTTAGAGGCATTCT TERM 1307 1011210 - 1011189 - G 70 -6.5 -4.08216 | overlap 1011191 CGATTCGCCGCAAAA TAGCGCCCC CTGC GAGACGCCA TATATCCCGCCGACC TERM 1308 1011516 - 1011498 - G 80 -8.8 -4.07568 | overlap 1011499 1011501 GTCGCCCGGCGAAAA CCACGGGA AAA TCCCGTGC TGATAGGCCATTAAC TERM 1309 1011515 - 1011499 - G 76 -12.3 -3.04398 | overlap 1011498 1011501 TCGCCCGGCGAAAAC CACGGGA AAA TCCCGTG CTGATAGGCCATTAA cydC 1013410 - 1011689 - | ATP-binding/permease protein cydC TERM 1310 1012583 - 1012565 - G 86 -9.5 -4.27117 | opp_overlap 1012577, overlap 1012542 CGCGCAGAAGACAAA CAGCGCG ATGAG CGCGCCG GGCTGCGTATTGCCG cydD 1015177 - 1013411 - | ATP-binding/permease protein cydD TERM 1311 1013466 - 1013451 - G 91 -11.8 -4.12599 | opp_overlap 1013451, overlap 1013441 AATAACGTCGCAAAA GCGCCG TTGG CGGCGC TGAGTTCGGCATAGC TERM 1312 1013451 - 1013466 + g 71 -11.8 -2.53263 | opp_overlap 1013441 1013451 AATAACGTCGCAAAA GCGCCG TTGG CGGCGC TGAGTTCGGCATAGC TERM 1313 1014022 - 1014046 + g 70 -9.9 -3.41051 | AGCTTTTACCGGAAC CGCTGCGTCCT ACC AGGACGGCGCG TTCTCCTGCCGCTAA TERM 1314 1014431 - 1014416 - G 73 -5.4 -4.63184 | overlap 1014403 AAGCGAGGTGAAAAA TTCCAG CACG CCGGAA GATAAAAAGGCGAGG TERM 1315 1014450 - 1014440 - G 74 -2.4 -5.0916 | GCCGGAAGATAAAAA GGCG AGG CGCA GTACTTCCATCGTGC TERM 1316 1014591 - 1014567 - G 75 -5.8 -4.65078 | gap 2 AGACGGTCAAGAAAA TGGCCGCTTAGC CGG GC-AAGC-GCCA GGAAATTGCGGCGGT TERM 1317 1015260 - 1015244 - R 100 -12.3 -4.89063 | opp_overlap 1015244 CGACGCAAAAATAAA GGCGACT TAT AGTCGCC TTTTTTACTTTTGTT TERM 1318 1015244 - 1015260 + r 100 -12.3 -5.52347 | opp_overlap 1015244 CGACGCAAAAATAAA GGCGACT TAT AGTCGCC TTTTTTACTTTTGTT trxB 1016259 - 1015291 - | thioredoxin-disulfide reductase lrp 1016805 - 1017299 + | leucine responsive regulatory protein TERM 1319 1017353 - 1017389 + F 95 -11.6 -4.13767 | gap 1, opp_overlap 1017355 1017359, overlap 1017356 1017359 TCCTGTTAATCCATA CAG-CAACAGTGCCGGG GCAA CCCGGTGCTGTTGTCCG TTTTAGCATCGGGCG TERM 1320 1017356 - 1017385 + F 95 -16.5 -2.75577 | opp_overlap 1017355 1017359, overlap 1017353 1017359 TGTTAATCCATACAG CAACAGTGCCGGG GCAA CCCGGTGCTGTTG TCCGTTTTAGCATCG TERM 1321 1017359 - 1017382 + F 88 -12.4 -3.52113 | opp_overlap 1017359 1017355, overlap 1017356 1017353 TAATCCATACAGCAA CAGTGCCGGG GCAA CCCGGTGCTG TTGTCCGTTTTAGCA TERM 1322 1018614 - 1018600 - g 72 -11.4 -3.09492 | overlap 1018608 1018609 TGCTCAACCGCAAGA GGCGCA AAG TGCGCC GTGGCAGCAACCTGT TERM 1323 1018943 - 1018928 - g 77 -8.2 -4.19624 | GAGGTGGAAGAGAAA CGCGCC CGTG AGCGCG AACAACTGGCGGCAT TERM 1324 1019098 - 1019125 + G 90 -12.6 -3.84825 | opp_overlap 1019085, overlap 1019099 GAGTGGCGCCCTGGC AGCAGGCGCCGC GGCC GCTGCGCCTGCA TTTAGTCTGGCTACC TERM 1325 1019099 - 1019124 + G 87 -16.1 -2.90573 | opp_overlap 1019085, overlap 1019098 AGTGGCGCCCTGGCA GCAGGCGCCGC GGCC GCTGCGCCTGC ATTTAGTCTGGCTAC TERM 1326 1019294 - 1019279 - g 91 -6.8 -5.19328 | gap 1, overlap 1019280 1019281 ATTGCAGAAGAAAAA GC-CCGC GAG GCGGAGC GCAATCAGTACGAGA SeD_A1025 1017434 - 1021399 + | DNA translocase FtsK TERM 1327 1021694 - 1021674 - g 73 -5.3 -4.66163 | overlap 1021676 ACCTTTACTCAAAAA GTCACCGAT GGC AGCGGTGCC GCGGTGCAGGAGGGA lolA 1021542 - 1022153 + | outer membrane lipoprotein carrier protein LolA TERM 1328 1022888 - 1022902 + G 74 -7 -4.25104 | overlap 1022891 GACCGAGATCGCCGG CGAGCG CAG CGCGCG TTTTGATAACAAAGG SeD_A1027 1022163 - 1023506 + | putative DNA recombination-associated ATPase RarA TERM 1329 1023675 - 1023691 + F 71 -9.5 -3.18582 | AAAACGTCGCTATTA CGTAAAC GCG GTTTACG TTCATCAATACAATC TERM 1330 1024547 - 1024558 + G 71 -7.2 -4.03167 | opp_overlap 1024546 GCCGATTAAAATGAC GGCG CATA CGCC TTGTTTCCGTTCTGA TERM 1331 1024919 - 1024907 - g 77 -4.8 -4.8543 | CAAGTCCGACAAAAA GACC CGTCT GGTC CATACCCTGAATGGT serS 1023765 - 1025057 + | seryl-tRNA synthetase TERM 1332 1025083 - 1025096 + F 100 -9.5 -5.61596 | opp_overlap 1025083 CTCCTCTTCTAAAAA GCGCC TTCG GGCGC TTTTTTTATGCCAGT TERM 1333 1025096 - 1025083 - f 93 -9.5 -4.56597 | opp_overlap 1025083 CTCCTCTTCTAAAAA GCGCC TTCG GGCGC TTTTTTTATGCCAGT TERM 1334 1026040 - 1026027 - g 71 -9.5 -3.54638 | ATAACCCTGGCGAAA CCCGC ATGA GCGGG GGCGGTGTAACGTAT SeD_A1029 1025294 - 1027738 + | anaerobic dimethyl sulfoxide reductase chain a dmsB_1 1027749 - 1028366 + | anaerobic dimethyl sulfoxide reductase, B subunit TERM 1335 1028634 - 1028646 + G 76 -3.3 -5.0538 | opp_overlap 1028631 GAGCAATGAAATTGC CAGCG GCT CGGTG TTTTTTGCGGTCGGC dmsC1 1028368 - 1029231 + | anaerobic dimethyl sulfoxide reductase, C subunit TERM 1336 1029286 - 1029232 - f 70 -9.9 -3.07816 | opp_overlap 1029240 1029241 GCGGTAGCCAGCTAA CGCGTTGACGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATTCGCCTTTAGCCG CCATCAATCTAAGGA TERM 1337 1029240 - 1029278 + F 100 -17.5 -3.53811 | opp_overlap 1029232, overlap 1029241 CAGCTAACGCGTTGA CGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATTCGCC TTTAGCCGCCATCAA TERM 1338 1029241 - 1029277 + F 100 -21 -2.72144 | opp_overlap 1029232, overlap 1029240 AGCTAACGCGTTGAC GCGCATTCGGCCTGCA GAACG TGCAGGCCGAATTCGC CTTTAGCCGCCATCA TERM 1339 1030302 - 1030325 + G 80 -8.8 -4.08767 | GCATCGGTTTCTGGA TGGCGGTGCT GGTG AGCGCCGGCA TTTTGGGGCAATGGC SeD_A1032 1029581 - 1030729 + | major facilitator family transporter TERM 1340 1030742 - 1030771 + F 100 -10.1 -4.77047 | overlap 1030744 TGACTGTTCTCTGAA TCGTATGCAGGAC GTGA GTCTTGCATACTA TTTGTTTATGTTTTA TERM 1341 1030744 - 1030769 + F 95 -12.7 -3.95749 | overlap 1030742 ACTGTTCTCTGAATC GTATGCAGGAC GTGA GTCTTGCATAC TATTTGTTTATGTTT TERM 1342 1030994 - 1030968 - g 70 -3 -4.73388 | gap 1, opp_overlap 1030982 1030985, overlap 1030985 AATGTGCAGGAAAAA CAGTTGCGATG GTACAA CATCGCC-CTG ATGTCGTTTATTACC TERM 1343 1031428 - 1031448 + G 72 -4 -4.71223 | overlap 1031419 GGTCTGTGGCCGGGA TTGCCATG TTTAT CATGTCAA TTTTATATGTTGTGA TERM 1344 1031858 - 1031870 + G 70 -3.3 -4.70583 | TACTCTGGGGCAAAT CGCCG CGC TGGTG TTTTCTATTGATGCG SeD_A1033 1030947 - 1032368 + | inner membrane transporter YcaM TERM 1345 1032385 - 1032407 + T 73 -7.7 -4.19238 | gap 1 GACGCTCTTTTCCAC GGCGCTC-CT GTCA GGCGAGCGCC TTTTAAGGTTACAGG TERM 1346 1032612 - 1032633 + T 86 -11.6 -3.53444 | opp_overlap 1032612 ATCCAGACAGCAAAA CGGCTACC GTCATG GGTAGCCG TTTAAAAGCGGGTAA TERM 1347 1032633 - 1032612 - T 100 -11.6 -4.39568 | opp_overlap 1032612 ATCCAGACAGCAAAA CGGCTACC GTCATG GGTAGCCG TTTAAAAGCGGGTAA pflA 1033458 - 1032661 - | pyruvate formate-lyase 1-activating enzyme SeD_A1035 1033586 - 1033735 + | hypothetical protein SeD_A1036 1034034 - 1034993 + | hypothetical protein TERM 1348 1035037 - 1034997 - T 74 -3.4 -4.9725 | gap 1, opp_overlap 1035008 1035035, overlap 1035008 ATGCTTATATAAAAA GTCATTAAAAAGGCCCCAC TGAT ATGGAGCCTTTTTTGT-AC GCTTTTTATGGCGTA TERM 1349 1035008 - 1035027 + T 84 -4.9 -5.28826 | opp_overlap 1034997 1035008 AAAAGTCATTAAAAA GGCCCCA CTGATA TGGAGCC TTTTTTGTACGCTTT TERM 1350 1035027 - 1035008 - T 84 -7.8 -4.79667 | opp_overlap 1035008, overlap 1034997 AAAAGTCATTAAAAA GGCCCCAC TGAT ATGGAGCC TTTTTTGTACGCTTT pflB2 1037351 - 1035069 - | formate acetyltransferase TERM 1351 1035488 - 1035502 + g 71 -4.2 -4.65916 | CAGCGCGACGACCAT CCGG GGTGTTA CCGG TTTTCTTACCATACA SeD_A1038 1038226 - 1037411 - | putative formate transporter FocA TERM 1352 1038621 - 1038601 - R 100 -10.4 -5.26247 | gap 1, opp_overlap 1038601 CGAAAATAAATAAAA CGGGGCCGC AAAG GCG-CCCCG TAATATAACGCAGCC TERM 1353 1038601 - 1038621 + r 71 -10.4 -2.62184 | gap 1, opp_overlap 1038601 CGAAAATAAATAAAA CGGGGCCGC AAAG GCG-CCCCG TAATATAACGCAGCC SeD_A1039 1040433 - 1038673 - | hypothetical protein TERM 1354 1038819 - 1038788 - G 83 -5.7 -4.85599 | gap 1 GGTAGTCCATAAAAA GCCG-CTTCACCGC TAAGC GCGGCGCTGGCGGC CTCTACAGCCTCTGC TERM 1355 1040222 - 1040235 + g 81 -3.7 -5.14563 | overlap 1040215 1040229 TATTCGCCCAGCGCC GAGGC CAGC GCCGC TTTTTTGGTCGCGCC TERM 1356 1040944 - 1040965 + G 78 -2.3 -5.25803 | GGAAAAACTGCAGCG CTCGAAC ATGACGGA GTTTGAG TTTTTTATGGAGCTT SeD_A1040 1040570 - 1041262 + | hypothetical protein serC 1041448 - 1042536 + | phosphoserine aminotransferase SeD_A1043 1042608 - 1042495 - | hypothetical protein TERM 1357 1042554 - 1042574 + gF 100 -10.4 -5.48623 | CGTTTCTTTTTTCAT CCCCACGG CCAGT CTGTGGGG TTTTTATTTCTGTTT TERM 1358 1043054 - 1043073 + GH 74 -7 -4.36914 | opp_overlap 1043050 CAGGAAAATTATCCG CCCCTGCG TCTG CGCGGCGG TTTTATCGGCGGCGA aroA 1042607 - 1043890 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1359 1043985 - 1044000 + FH 81 -3.3 -5.33785 | opp_overlap 1043985 TTGTTGATGATTTAA CACAT TGATTT ATGTG TTTTTTATAATAGTT SeD_A1044 1044033 - 1044794 + | peptidase M48, Ste24p cmk 1044967 - 1045650 + | cytidylate kinase TERM 1360 1045938 - 1045928 - g 87 -8.2 -4.63527 | overlap 1045930 TGAGCAGTTCAAAAA CGCC CAG GGCG AACTGGAAATCCAGG rpsA 1045764 - 1047437 + | ribosomal protein S1 TERM 1361 1047546 - 1047516 - f 85 -12.7 -3.33696 | gap 1, opp_overlap 1047523, overlap 1047519 1047523 TCGGCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATCTCACGGCTGCA TERM 1362 1047544 - 1047519 - f 93 -15.5 -2.84098 | opp_overlap 1047523, overlap 1047516 1047523 GCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATCTCACGGCTG TERM 1363 1047523 - 1047540 + F 86 -14.1 -3.20382 | opp_overlap 1047519 1047516 1047523 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATCTCACG TERM 1364 1047540 - 1047523 - f 90 -14.1 -3.30554 | opp_overlap 1047523, overlap 1047519 1047516 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATCTCACG ihfB 1047593 - 1047877 + | integration host factor, beta subunit TERM 1365 1047900 - 1047930 + F 87 -11.3 -3.86897 | opp_overlap 1047908, overlap 1047901 1047908 CGAAAAACTTGAACC CGAAAAAAGCACC GTCAG GGTGCTTTTTTCA TTTATACGCCGTCAG TERM 1366 1047901 - 1047929 + F 87 -14.8 -2.91924 | opp_overlap 1047908, overlap 1047900 1047908 GAAAAACTTGAACCC GAAAAAAGCACC GTCAG GGTGCTTTTTTC ATTTATACGCCGTCA TERM 1367 1047922 - 1047908 - f 87 -7.1 -5.09426 | opp_overlap 1047901 1047900 1047908 TTGAACCCGAAAAAA GCACC GTCAG GGTGC TTTTTTCATTTATAC TERM 1368 1047908 - 1047922 + F 90 -7.1 -5.42514 | opp_overlap 1047908, overlap 1047901 1047900 TTGAACCCGAAAAAA GCACC GTCAG GGTGC TTTTTTCATTTATAC TERM 1369 1049393 - 1049411 + G 71 -5.9 -4.28656 | overlap 1049395 ATGGTACCTGACCGA TCGCGCG TTAGC CGCGCTA TTTTACCTGTTGAAT TERM 1370 1049749 - 1049766 + G 74 -7.7 -4.21194 | opp_overlap 1049748, overlap 1049752 TGCGCTGGCATAATC TGACGCC GGAG GGCGTTA TTTTGAGTCATGAGC TERM 1371 1049752 - 1049763 + G 77 -7.2 -4.22883 | opp_overlap 1049748, overlap 1049749 GCTGGCATAATCTGA CGCC GGAG GGCG TTATTTTGAGTCATG SeD_A1048 1048158 - 1050371 + | DNA internalization-related competence protein ComEC/Rec2 msbA 1050408 - 1052156 + | lipid A export permease/ATP-binding protein MsbA TERM 1372 1052375 - 1052365 - g 70 -6.8 -4.07568 | TTGGCTGGTGGAAAA GCTG CAA CAGC GTGGCGTGCGCGTGG TERM 1373 1052755 - 1052718 - g 95 -12.7 -4.08216 | gap 1, opp_overlap 1052720 CCAGTCGCCTGAAAA CCGTG-GACGCCGCTATC GTG AATGGCGGCGTCGCCCGG GCGGGTGAAATACCC lpxK 1052153 - 1053130 + | tetraacyldisaccharide 4'-kinase TERM 1374 1053264 - 1053245 - g 75 -6.3 -4.65895 | opp_overlap 1053259 GGGGCTATTGAAAAA GCCGCGC CGTAAC GCGCTGC CTGGCGATGTTCTTG TERM 1375 1054019 - 1054007 - g 73 -9.1 -3.90922 | ACCGGCGCTAAATAA CGCCT TAA AGGCG ACCCATAGCGCAGTG TERM 1376 1054029 - 1054083 + G 100 -12.8 -4.24404 | overlap 1054027 AAGGCGACCCATAGC GCAGTGCTGTCGCCTTTCGATCCTGT GAT ATGGGATCGCAAGCGGGCAGCGCAGC TTTTCGGATTTAACT SeD_A1051 1053174 - 1054406 + | hypothetical protein SeD_A1052 1054458 - 1054640 + | tetraacyldisaccharide 4'-kinase kdsB 1054637 - 1055383 + | 3-deoxy-D-manno-octulosonate cytidylyltransferase TERM 1377 1055425 - 1055389 - f 73 -10.9 -2.74371 | opp_overlap 1055386, overlap 1055386 1055423 AATGCGTTAACATGA TCCTGTTCATGATCGTC TTA GACGGTCATGAACAGCG CGGTATGATAGCGCA TERM 1378 1055480 - 1055493 + F 70 -5.3 -4.45077 | TCAGTGGCGGCTTTC TCGTA CCGT TACGA TTTTCCTCATTTTTC TERM 1379 1055679 - 1055669 - g 74 -8.2 -4.05446 | opp_overlap 1055668 1055669 1055676 TGCGTGAATGAGAAA GCGG ATT CCGC ATTGTGGTCATTATA SeD_A1054 1055594 - 1056487 + | hypothetical protein SeD_A1055 1057243 - 1056467 - | hypothetical protein TERM 1380 1056802 - 1056780 - G 70 -9.8 -3.40611 | overlap 1056778 TCCAGCGTAATAATA TCGCTACGCG GTA CGCCCAGCGA CTGCGCCACCCGCGC TERM 1381 1056905 - 1056871 - G 71 -4.9 -4.56597 | gap 1 TGCCGCCGGTAAAAA TCAGCC-TGGCTCCCG GATT CGCGCGCCACAGCCGA ATGCCTTCCGCCAGC smtA 1057379 - 1058182 + | SmtA protein TERM 1382 1059053 - 1059024 - g 73 -8.7 -3.87815 | CGTCACGTGCATAAA TTTATCCGTACCG CGAT CGATATGGATAAA AACCGTGTCTTCGCC TERM 1383 1059343 - 1059370 + G 77 -11.3 -3.49568 | gap 1, opp_overlap 1059341, overlap 1059313 1059341 ATCTGGCGCAATACC CGCGCGCGCGTC ATTTC GACGTG-GCGCG TATTGTTATCGATCA mukF 1058175 - 1059497 + | chromosome partition protein MukF mukE 1059478 - 1060182 + | chromosome partition protein MukE TERM 1384 1060827 - 1060837 + G 70 -6.8 -4.20367 | AGCGCCATTACCCGA TCGC TAC GCGA TTATTTATTGCCGGA TERM 1385 1061598 - 1061575 - g 93 -4.4 -5.4505 | overlap 1061578 CGTTGGAACAAAAAA TGAGCGTGGC GCAA ACCGCGCACA GCCAGTTTGAGCAGG TERM 1386 1063048 - 1063027 - g 70 -8.7 -3.72893 | gap 1, opp_overlap 1063026, overlap 1063031 CATGGTCGCAGCAAA TGC-AGCGCG ACG CGCGCCAGCA GGCTTTTGCTCTGGC TERM 1387 1063167 - 1063145 - g 79 -7.6 -4.42238 | overlap 1063146 CGATCTCAACGAAAA GCTGCGCCAG CGG CTGGAGCAGG CGGAAGCCGAGCGTA TERM 1388 1063166 - 1063146 - g 74 -11.1 -3.2486 | overlap 1063145 GATCTCAACGAAAAG CTGCGCCAG CGG CTGGAGCAG GCGGAAGCCGAGCGT TERM 1389 1063200 - 1063220 + G 81 -12.5 -3.07816 | CGCGCCCGCGAAGCG CTGCGCAGC CAT GCCGCGCAG TTAAGTCAGTACAGC SeD_A1059 1060182 - 1064636 + | chromosome partition protein MukB TERM 1390 1064748 - 1064763 + F 100 -11.8 -5.42975 | TTATCATTAGCCTGG GGCGGC GAAA GCCGCC TTTTTCTTTATCTGA SeD_A1060 1064981 - 1066831 + | YcbB SeD_A1061 1067091 - 1067639 + | putative exported protein, Tat-dependent SeD_A1062 1067667 - 1068314 + | hydroxyacylglutathione hydrolase TERM 1391 1068351 - 1068321 - T 93 -14.2 -3.50853 | opp_overlap 1068328, overlap 1068328 GTCTGGTAAGCAGAA TGAAAAAGCCTGCA ATG TGCAGGCTTTTTTA TCGGTCACGCCAGTC TERM 1392 1068344 - 1068328 - T 100 -12.3 -4.95876 | opp_overlap 1068328, overlap 1068321 AAGCAGAATGAAAAA GCCTGCA ATG TGCAGGC TTTTTTATCGGTCAC TERM 1393 1068328 - 1068344 + T 100 -12.3 -5.28176 | opp_overlap 1068328 1068321 AAGCAGAATGAAAAA GCCTGCA ATG TGCAGGC TTTTTTATCGGTCAC aspC 1069566 - 1068376 - | aspartate transaminase TERM 1394 1069083 - 1069044 - G 70 -9.2 -3.66556 | gap 1, opp_overlap 1069051 AACCGTGGAACAGAA CCACATCGCCGGCCTGTGC TTC GCTCAGGCTGGCT-TGTAG CGCTTCAAAATCCAG TERM 1395 1069051 - 1069077 + g 100 -15.8 -3.33261 | opp_overlap 1069044 GAACAGAACCACATC GCCGGCCTGTGC TTC GCTCAGGCTGGC TTGTAGCGCTTCAAA TERM 1396 1069151 - 1069163 + g 71 -4.8 -4.5442 | ACTTCCAGGCCGGCA GCGT TAAAC ACGC TTTTGTGGTTCGGCC TERM 1397 1069251 - 1069268 + g 71 -9.8 -3.55761 | overlap 1069252 1069254 1069260 CGGCAATGCGTAACG CGCCGG TACCGC CCGGCG TTTGCGCCGTGCGTG TERM 1398 1069718 - 1069703 - R 100 -9 -5.77988 | opp_overlap 1069703 AGAGAGATAAAAAAA CAGGAC CGAA GTCCTG TTTTTGAGGCATAAA TERM 1399 1069703 - 1069718 + r 89 -9 -4.58395 | opp_overlap 1069703 AGAGAGATAAAAAAA CAGGAC CGAA GTCCTG TTTTTGAGGCATAAA SeD_A1064 1070842 - 1069751 - | outer membrane protein F SeD_A1065 1071155 - 1071271 + | hypothetical protein TERM 1400 1071274 - 1071284 + T 72 -2.6 -5.04597 | opp_overlap 1071259 1071258 1071274, overlap 1071259 TAATCCGCAATAAAA TTAA GGA TTAA TTTTTATGTGTAAAT SeD_A1066 1071479 - 1071360 - | hypothetical protein TERM 1401 1071401 - 1071417 + gT 86 -13.7 -3.12999 | opp_overlap 1071401 TCAGGCGAAAAAAAA GGCCAGC ATA GCTGGCC TTGAGTGTGACGTAA TERM 1402 1071417 - 1071401 - GT 100 -13.7 -5.78622 | opp_overlap 1071401 TCAGGCGAAAAAAAA GGCCAGC ATA GCTGGCC TTGAGTGTGACGTAA asnS 1072836 - 1071436 - | asparagine tRNA synthetase TERM 1403 1071946 - 1071932 - GR 80 -7.1 -4.60797 | TCGGTAGAGACAAAA CGCTC CAGAC GAGCG ATAGCGTCTTTATCT TERM 1404 1072431 - 1072387 - GR 76 -9.3 -3.67597 | CTGCTCATCGAAGAA GCGAT-GCAGCGCCTGCGCCA GAGTA TGGCGAACGCGC-GCTACCGC GCCAATCAGGTTGGT TERM 1405 1072997 - 1072978 - R 74 -5.7 -4.6526 | AGAAACCTGTAAAAA GTTCGCA CCTGCT CGCGAAC CATTGAGAATTTAGG SeD_A1068 1073498 - 1073037 - | regulator for leucine TERM 1406 1073139 - 1073126 - G 79 -3.1 -5.13722 | CTGAGGAAAAGAAAA GCTCA CGGG TAAGC GCTTCATATTCCGCC SeD_A1069 1073717 - 1073562 - | hypothetical protein TERM 1407 1074751 - 1074762 + G 77 -4.4 -4.88918 | GCCTATTATTCGGGA CAAC ACCA GTTG TTTTATTTCCGCTGA SeD_A1070 1073816 - 1075030 + | diaminopropionate ammonia-lyase TERM 1408 1075092 - 1075076 - f 75 -2.9 -5.1101 | overlap 1075064 1075077 GCAGCATGTAAAAAA CGCGTTT TTT ATACGCA TAATAAACCTAATGC SeD_A1071 1075104 - 1075262 + | hypothetical protein TERM 1409 1075312 - 1075323 + G 75 -5.8 -4.62708 | CTCTTTGAATTTCTA TGGG GTGG CCCA TTATTTTTGTGTGTT SeD_A1072 1075276 - 1076712 + | putative transcriptional regulator, Lrp family TERM 1410 1076778 - 1076752 - T 85 -12.3 -3.41745 | overlap 1076756 TGGTCAGAAGAGTAA CAAAGCGCCCA CTTTC CGGGCGCTTCG CACAGGCATGGTTAA TERM 1411 1076774 - 1076756 - T 87 -9.5 -4.34759 | overlap 1076752 CAGAAGAGTAACAAA GCGCCCA CTTTC CGGGCGC TTCGCACAGGCATGG pncB 1077992 - 1076790 - | nicotinate phosphoribosyltransferase SeD_A1074 1079527 - 1078187 - | integrase TERM 1412 1079241 - 1079284 + g 73 -5.3 -4.60889 | overlap 1079249 1079278 1079279 AGCACAGTAATTTCC TTTCTATCCTGACCGAACC GGGCAA GGTTCGGTGAGTTTGGGAA TTTTTCCACATAGTT TERM 1413 1079249 - 1079276 + g 74 -9.9 -3.68853 | overlap 1079241 AATTTCCTTTCTATC CTGACCGAACC GGGCAA GGTTCGGTGAG TTTGGGAATTTTTCC TERM 1414 1079343 - 1079360 + g 82 -5.5 -5.07567 | opp_overlap 1079334 1079329 ACCGAAGAACGCAGT TCGCCAG CTAT CTTGCGA TTTTTTGCAGTGTCA TERM 1415 1079369 - 1079401 + g 73 -9.1 -3.89215 | overlap 1079370 CTTGCGATTTTTTGC AGTGTCAGGGATACC AAG GTTTTCCCTGACACG TTTACCTTTATACAG TERM 1416 1079370 - 1079400 + g 79 -12.6 -2.93047 | overlap 1079369 TTGCGATTTTTTGCA GTGTCAGGGATACC AAG GTTTTCCCTGACAC GTTTACCTTTATACA SeD_A1075 1079772 - 1079524 - | excisionase SeD_A1076 1080052 - 1079813 - | putative cytoplasmic protein TERM 1417 1080073 - 1080057 - R 70 -5.1 -4.40572 | ATAAGGCGCATAAAA CCTCC TCAGGCG GGAGG GCGTAACCCCTCCCG SeD_A1077 1080571 - 1080095 - | gifsy-2 prophage RecT SeD_A1078 1084405 - 1081217 - | gifsy-1 prophage RecE TERM 1418 1082483 - 1082515 + g 80 -11.9 -3.45032 | overlap 1082505 1082506 TGGTACACCTTCATA GCGGCCCGGCTCGAA GTA TTCCGGCCAGGCTGC TTCTGGCTCTTCTTG TERM 1419 1084524 - 1084538 + r 79 -8.5 -4.30448 | TCACCGGACGTATGG GCCGC CTTGC GCGGC TTTTGCGTTAACTTT SeD_A1079 1084716 - 1084546 - | hypothetical protein SeD_A1080 1084825 - 1084709 - | hypothetical protein TERM 1420 1085094 - 1085079 - H 100 -7.5 -5.75478 | opp_overlap 1085079 AATGACATAAAAAAA CCGCC AGTTAA GGCGG TTAGTAGTTTTAAAG TERM 1421 1085769 - 1085757 - H 71 -3.4 -4.85782 | opp_overlap 1085757 TGGTTTAAAAACAAA GTTC CCGGC GAAC TTGTAGTTCGAGTGG SeD_A1081 1086076 - 1086225 + | gifsy-1 prophage cI TERM 1422 1086283 - 1086245 - g 74 -3.1 -4.91873 | gap 1, opp_overlap 1086252, overlap 1086247 1086252 GACAGCAACCAAAAA GGCGAAAGCCGC-GGTGA GGGG TCACCAACGGCTTTCTGG TGCAAAAACGGTAGG TERM 1423 1086276 - 1086252 - g 71 -8.6 -3.81062 | gap 1, opp_overlap 1086252, overlap 1086247 1086245 ACCAAAAAGGCGAAA GCCGC-GGTGA GGGG TCACCAACGGC TTTCTGGTGCAAAAA SeD_A1082 1086216 - 1086332 + | hypothetical protein TERM 1424 1086810 - 1086835 + G 77 -8.3 -4.11484 | opp_overlap 1086803 1086827, overlap 1086791 1086811 CCCGAAAACGGGGAT AGTTATCCCTG AAAA CAGGGATAGCG TTTTACCCCATTCAG TERM 1425 1086811 - 1086834 + G 76 -11.8 -3.06569 | opp_overlap 1086803 1086827, overlap 1086810 CCGAAAACGGGGATA GTTATCCCTG AAAA CAGGGATAGC GTTTTACCCCATTCA TERM 1426 1086881 - 1086864 - g 88 -11.3 -4.09864 | opp_overlap 1086854 1086851 AGCCATCCCTGAAAA CGGGGAT AGTT ATCCCCG AAAAGAGGGAAGGGC SeD_A1083 1086310 - 1087293 + | gifsy-1 prophage PrpO SeD_A1084 1087296 - 1088045 + | DNA replication protein DnaC SeD_A1085 1088086 - 1088403 + | putative DNA-binding protein SeD_A1086 1088400 - 1088924 + | conserved hypothetical bacteriophage protein SeD_A1087 1088924 - 1089397 + | DNA N-4 cytosine methyltransferase M.NgoMXV SeD_A1088 1089401 - 1089973 + | Eaa1 TERM 1427 1089984 - 1090003 + F 71 -10 -3.14931 | opp_overlap 1089979 1089976 CGTGAAACACCTATA TGCCGGTC CTGT GATCGGCA TTAGTGCAAAATCAA TERM 1428 1090041 - 1090023 - f 86 -4.6 -5.46698 | TGCAAAATCAAAAAA TACGAATC AGT GATTTGTA ATCAACATTTCTTAG SeD_A1089 1090178 - 1090333 + | putative bacteriophage protein TERM 1429 1090362 - 1090349 - f 71 -9.5 -3.28791 | opp_overlap 1090349 AGTGTTGCGTCATAA CCCGC TGCG GCGGG TTTTTTCGCCTAAAA TERM 1430 1090349 - 1090362 + F 100 -9.5 -5.0538 | opp_overlap 1090349 AGTGTTGCGTCATAA CCCGC TGCG GCGGG TTTTTTCGCCTAAAA SeD_A1090 1090489 - 1090728 + | hypothetical protein TERM 1431 1090773 - 1090763 - f 72 -5.4 -4.55295 | opp_overlap 1090768 GTTTCCAGAAATAAA GTCA GTG TGAC GGGGGGTTACATGTT TERM 1432 1090885 - 1090911 + F 78 -6.6 -4.68103 | TAGCGGACGCGCCCT GATGTATCGTCG TGG TGACGAGATATC TTTTGTTCCCCTTCA TERM 1433 1091664 - 1091632 - g 100 -15.6 -3.31144 | gap 1 GCGCGAGGCGGAGAA CGCCGCCGCCCAGCT CATG AGCTGGGCGG-GGTG ATGGCGATGAAATAC SeD_A1091 1091063 - 1091665 + | gifsy-2 prophage protein SeD_A1092 1091665 - 1091871 + | hypothetical protein TERM 1434 1092078 - 1092063 - g 78 -6 -4.72201 | overlap 1092064 GCTGAGAAAAAAGAA CGCGCC GCCT GGCGCC AGCGGAAAGCCGCGG TERM 1435 1092077 - 1092064 - g 70 -9.5 -3.42236 | overlap 1092063 CTGAGAAAAAAGAAC GCGCC GCCT GGCGC CAGCGGAAAGCCGCG TERM 1436 1092419 - 1092392 - g 71 -7.6 -4.03219 | gap 1, overlap 1092394 ACTCGAGAACAATAA CACCCCGCACCGC TGG ACGG-GCGAGGAG CTGAAGGAAATCAGG SeD_A1093 1091874 - 1092485 + | bacteriophage Lambda NinG protein TERM 1437 1092481 - 1092470 - f 70 -2.2 -5.00616 | gap 1 GCGTGCGCTAAAAAA GCTGG AGG CC-GC ATGAAACCAGAACTG SeD_A1094 1092618 - 1093415 + | antitermination protein Q TERM 1438 1093510 - 1093525 + F 100 -8.2 -5.19275 | opp_overlap 1093510 TACAAGAATTAAGAA CCTCGC CTCG GCGGGG TTTTCTTTTATGGAT TERM 1439 1093687 - 1093706 + F 93 -9.2 -4.84918 | opp_overlap 1093687 CCGGCAACAATTTAA GCCTCGGT GATT GCCGGGGC TTTTCTGTTTGTGCC SeD_A1095 1093814 - 1094161 + | phage holin, lambda family TERM 1440 1094636 - 1094646 + G 85 -4.6 -5.28176 | overlap 1094623 GTCATGCCGCCCGTT CCGC AGC GTGG TTTTTTGTGACTGGA SeD_A1096 1094164 - 1094778 + | lytic enzyme TERM 1441 1094813 - 1094839 + G 100 -10.9 -5.60689 | TAAAAAATTCTGGAA GCCATTAGCAG AAATA CTGCTGGTGGC TTTTTTGTTATGTGC SeD_A1097 1094775 - 1095326 + | protein gp55 SeD_A1098 1095613 - 1095729 + | hypothetical protein TERM 1442 1095968 - 1095949 - g 95 -5 -5.41746 | overlap 1095937 1095936 1095963 AAGTGCGCAAAAAAA TGCGCA GAAAAAAA TGCGCA CTGCGCAGGCAAAAA TERM 1443 1095975 - 1095963 - g 100 -9.1 -5.61596 | overlap 1095949 ATGCGCAGAAAAAAA TGCGC ACT GCGCA GGCAAAAAAAAGCGC SeD_A1099 1095791 - 1096765 + | hypothetical protein SeD_A1100 1096755 - 1098026 + | hypothetical protein TERM 1444 1098430 - 1098406 - gf 82 -7.1 -4.82901 | GTCGCTGTATAAAAA GTCCATCACTT TTA ACGTGCTGGAC CCGATGAATACTGCT TERM 1445 1099060 - 1099078 + GF 71 -4.5 -4.57073 | gap 1, overlap 1099060 1099061 1099063 TCGCATCGTTCAGTA C-CGGGCG TGGT CGCCTGAG TTTTTCGAGGCGCTG SeD_A1101 1098026 - 1099456 + | hypothetical protein SeD_A1102 1099428 - 1100303 + | hypothetical protein TERM 1446 1100888 - 1100873 - g 77 -4.6 -4.84359 | overlap 1100875 1100884 GCACCCGGAGAAAAA CACGCT GAAC AGCGAG GAGTACGCCGCGAGG SeD_A1103 1100304 - 1101878 + | nudix hydrolase TERM 1447 1101985 - 1102011 + G 95 -14.4 -3.33969 | TGGTCTTATCCAGGG CGTGGCGCTGGA CGA TCCGGCGGCACG TTATGCGCTGGCTTC SeD_A1104 1101899 - 1102771 + | hypothetical protein SeD_A1105 1102789 - 1103820 + | hypothetical protein TERM 1448 1103837 - 1103864 + F 100 -13.4 -5.00616 | TTTCCCTCGCTGATT TCCCTGCGTGCC GGAG GGTGCGCGGGGA TTTTTTACCCAGGAG SeD_A1106 1103885 - 1104370 + | hypothetical protein SeD_A1107 1104383 - 1104808 + | hypothetical protein SeD_A1108 1104793 - 1105236 + | hypothetical protein TERM 1449 1105504 - 1105486 - g 74 -3 -4.91109 | overlap 1105487 GCTCTACGATAAAAA TGTGGTGA CCT TCACCGCG CAGGCCGATATTGAT SeD_A1109 1105220 - 1106158 + | hypothetical protein SeD_A1110 1106163 - 1107557 + | hypothetical protein SeD_A1111 1107561 - 1107998 + | hypothetical protein SeD_A1112 1107998 - 1108585 + | hypothetical protein SeD_A1114 1108725 - 1108594 - | hypothetical protein TERM 1450 1109234 - 1109247 + GH 70 -6.7 -4.07687 | opp_overlap 1109233, overlap 1109214 GCAGGTGGACTTAAT TCGAC TGCT GTCGA TTTTCAGAAAGCGCT TERM 1451 1110627 - 1110601 - gH 90 -13.1 -3.48036 | TACCAGCACAAGTAA CCCTGTCGTAC AACCA GTACAACAGGG TTCGGGGAAAACTGA TERM 1452 1110675 - 1110660 - gH 76 -7.6 -4.2008 | overlap 1110643 AGATACTGCAACAAA TTCTGG ATAA CCAGAA GCGTGGTCATGCTCA SeD_A1113 1108709 - 1110763 + | hypothetical protein SeD_A1115 1110763 - 1111260 + | hypothetical protein SeD_A1116 1111318 - 1111479 + | hypothetical protein SeD_A1117 1111521 - 1111751 + | hypothetical protein SeD_A1118 1111751 - 1112803 + | hypothetical protein SeD_A1119 1112800 - 1113516 + | hypothetical protein TERM 1453 1113682 - 1113700 + G 76 -3 -5.0916 | overlap 1113683 CTAACGGCTCAGTTA TTCAGCAG ATA CTGCCGAC TTTTTATGTTAACCG SeD_A1120 1113513 - 1113845 + | hypothetical protein TERM 1454 1114864 - 1114880 + G 76 -2.9 -5.1356 | overlap 1114866 TGAACCAATAAACAT TTTCCTG ATT CGGGATA TTTTTCTTAATCAGG SeD_A1121 1113842 - 1115068 + | hypothetical protein TERM 1455 1115539 - 1115553 + G 100 -7.1 -6.02914 | TTGATATTAGTGTAA TGCCC GATAA GGGCA TTTTTTTTGTCTCCA SeD_A1122 1115052 - 1115678 + | hypothetical protein SeD_A1123 1115675 - 1117384 + | side tail fiber protein TERM 1456 1117771 - 1117738 - g 77 -8.3 -4.08064 | gap 2, overlap 1117745 1117756 AAGGTCTGGGTAAAA GACGAAGC-G-GCTG AAAAAG CAGCGCAGCTTCGTC AGGCGGAAGAAACCA SeD_A1124 1117384 - 1117965 + | tail fiber assembly like-protein SeD_A1125 1118348 - 1118112 - | hypothetical protein SeD_A1126 1118443 - 1119411 + | secreted effector protein TERM 1457 1119569 - 1119549 - Tf 84 -7.5 -4.82128 | overlap 1119550 TCAGGAAAGAGAAAA GCCAGTCGC TGT ACGACTGGA TACAGGCGCAGTTGA TERM 1458 1119568 - 1119550 - Tf 82 -11 -3.48193 | overlap 1119549 CAGGAAAGAGAAAAG CCAGTCGC TGT ACGACTGG ATACAGGCGCAGTTG SeD_A1129 1120685 - 1120059 - | hypothetical protein SeD_A1128 1120667 - 1120816 + | hypothetical protein TERM 1459 1120940 - 1120925 - TR 100 -6.8 -5.96219 | opp_overlap 1120925 1120924 GAGCCATAAAAAAAA CAGCCC TGAC AGGCTG GTTTTTAAGGGGAAT SeD_A1130 1121731 - 1121045 - | gifsy-2 prophage protein SeD_A1131 1122193 - 1122002 - | gifsy-2 prophage MsgA TERM 1460 1124143 - 1124123 - g 73 -5.3 -4.56775 | ATTCCGTTGCAAAAA GGCGGTCAC CCG GTCAACGCC GTGCTGAACGTCACG pepN 1122620 - 1125232 + | aminopeptidase N TERM 1461 1125260 - 1125288 + F 100 -13.2 -5.40072 | gap 1, opp_overlap 1125258 1125256 1125251 1125260 TAAAGAGGTAAGACA TGCCCGGTAAGCG TTAG CGCT-GCCGGGCA TTTTTTTGCCGGACG TERM 1462 1125288 - 1125260 - f 77 -11 -3.14671 | gap 1, opp_overlap 1125260, overlap 1125258 1125256 1125251 TAAAGAGGTAAGACA TGCCCGGTAAGCG TTAG CGCTG-CCGGGCA TTTTTTTGCCGGACG pyrD 1125440 - 1126450 + | dihydroorotate oxidase TERM 1463 1126469 - 1126498 + F 78 -5.7 -4.84918 | opp_overlap 1126469 TTAGCCTTTATCAGA CAACCAGGGCT TTATTTCC GGCGCTGGTTG TTTTATATTTCTCCA TERM 1464 1126736 - 1126758 + G 86 -6.8 -4.99035 | CGTAAAATGCTTACG CCGGACGCGT TTT GCCCGACCGG TTTTTGTGTGGATGA SeD_A1134 1126616 - 1127158 + | hypothetical protein SeD_A1135 1128264 - 1127155 - | MOSC domain protein TERM 1465 1129736 - 1129725 - g 83 -7.2 -4.59773 | opp_overlap 1129725 1129724 1129728 GTGGATGCGCAAAAA GCGC GGCA GCGC CTGTTCGATATTATT SeD_A1136 1128363 - 1130471 + | putative RNA methylase family UPF0020 TERM 1466 1131593 - 1131573 - g 74 -9.7 -3.6608 | overlap 1131559 ACCACGCTACTGAAA CTGATGCTG GGA CAGCTTCAG GCTGACAGCGGGCGC TERM 1467 1131795 - 1131780 - g 81 -11.8 -3.59979 | opp_overlap 1131790 1131791 CTGTTTCACCCCAAA CGGGCG ATGA CGCCCG TCCGCGCGCTTTCCG TERM 1468 1132253 - 1132268 + G 80 -4.6 -5.00616 | overlap 1132241 AGCGCTACAGGCGCA GGTTGC GGAT GCGGCC TTTTTTAGCCAACCC SeD_A1137 1130484 - 1132391 + | ABC transporter ATP-binding protein uup SeD_A1138 1132406 - 1133659 + | paraquat-inducible protein A TERM 1469 1134511 - 1134490 - g 79 -3 -5.19212 | ACGACGATCAAAAAA GTATTCAG GATTCG CTGTATAC CGATCATATCGATTA TERM 1470 1134802 - 1134784 - g 80 -8.8 -4.07568 | GCGCTTCGCTTAAAA CCGGTAAC CTG GTGACCGG GGCGCTGTATGTCGA TERM 1471 1135011 - 1134989 - g 71 -10.6 -3.25169 | opp_overlap 1134991, overlap 1134981 1135003 1135004 TGAACAAGCGACCAA TACGCTGTCT GAA AGCCAGCGTA CTATGCGTCGGCTGC SeD_A1139 1133664 - 1135304 + | paraquat-inducible protein B TERM 1472 1135382 - 1135371 - g 72 -2.2 -4.84311 | GCGGAGAGAATAAAA GCTA TTAT CAGC TCCCGATAGCGCAAA SeD_A1140 1135301 - 1135864 + | putative lipoprotein SeD_A1141 1135956 - 1135819 - | hypothetical protein TERM 1473 1135887 - 1135913 + g 100 -12.3 -6.20267 | opp_overlap 1135887 GTAATGTAAATTTAA CCGCTTCAGGT CGTGC GCCTGAGGCGG TTTTTTTATTTTTGA TERM 1474 1136055 - 1136077 + r 71 -7.1 -4.16397 | overlap 1136048 1136054 AGGTATTCGTGTAGT GTGATTGCA CATTT TGTAATCAC TGTTTTCTTTTCCAC TERM 1475 1136304 - 1136334 + r 74 -8.2 -3.95219 | opp_overlap 1136307 1136311, overlap 1136311 1136332 TCTGTCTCTTTAGAA AAAGAAACCTCCGC AGT GCGGAGGTTTCGCC TTTATGGGCTTTGCA TERM 1476 1136331 - 1136307 - R 100 -18.7 -4.82901 | opp_overlap 1136304 1136311, overlap 1136311 GTCTCTTTAGAAAAA GAAACCTCCGC AGT GCGGAGGTTTC GCCTTTATGGGCTTT TERM 1477 1136327 - 1136311 - R 100 -13.7 -4.96501 | opp_overlap 1136304 1136311, overlap 1136307 CTTTAGAAAAAGAAA CCTCCGC AGT GCGGAGG TTTCGCCTTTATGGG TERM 1478 1136311 - 1136327 + r 100 -13.7 -3.74347 | opp_overlap 1136311 1136307, overlap 1136304 CTTTAGAAAAAGAAA CCTCCGC AGT GCGGAGG TTTCGCCTTTATGGG fabA 1136905 - 1136387 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA SeD_A1143 1138734 - 1136974 - | lon protease (S16) proteolytic domain protein TERM 1479 1138895 - 1138878 - H 72 -2.7 -5.04385 | overlap 1138893 CAGATGGCTAAAAAA CTGATAT TCTG ATAACAG TTACACGGTAACGTT SeD_A1144 1138920 - 1139372 + | protein YcbG TERM 1480 1139433 - 1139400 - T 83 -14.1 -2.64616 | gap 1, opp_overlap 1139410, overlap 1139402 1139410 TTGTCACCCAGACCA GAGCAAAAAACCCCGC GAC GCGGGGTTTTTTA-TC AGACGGAAACTTAAG TERM 1481 1139432 - 1139402 - T 82 -13.4 -2.8655 | opp_overlap 1139410, overlap 1139400 1139410 GTCACCCAGACCAGA GCAAAAAACCCCGC GAC GCGGGGTTTTTTAT CAGACGGAAACTTAA TERM 1482 1139424 - 1139410 - T 100 -12.8 -5.23316 | opp_overlap 1139410, overlap 1139402 1139400 GACCAGAGCAAAAAA CCCCGC GAC GCGGGG TTTTTTATCAGACGG TERM 1483 1139410 - 1139424 + T 100 -12.8 -5.24129 | opp_overlap 1139410 1139402 1139400 GACCAGAGCAAAAAA CCCCGC GAC GCGGGG TTTTTTATCAGACGG ompA 1140553 - 1139444 - | outer membrane protein A TERM 1484 1140784 - 1140751 - R 78 -5.4 -4.80882 | gap 1, opp_overlap 1140753 1140761, overlap 1140753 1140761 ATCGTACAGCAAAAA TTGCGGAAACCGCTT CTGAC AAGCGTTCT-CGCAA AAAAAACGTTAGCAC SeD_A1146 1141362 - 1140853 - | cell division inhibitor TERM 1485 1142156 - 1142119 - g 71 -10.6 -3.25823 | gap 2, overlap 1142120 GTCGGCGTACATGAA GCGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCGA CTGGGCTCATTCGCT TERM 1486 1142155 - 1142120 - g 81 -14.1 -2.55351 | gap 2, overlap 1142119 TCGGCGTACATGAAG CGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCG ACTGGGCTCATTCGC SeD_A1147 1141579 - 1142184 + | TfoX family protein yccS 1144324 - 1142171 - | hypothetical membrane protein TERM 1487 1142752 - 1142741 - G 73 -5.8 -4.41348 | GTCCGGCCAAATAAA GCTG ACCG CAGC CCAGGCGATAGCGCA TERM 1488 1142973 - 1142962 - G 75 -5.8 -4.64846 | overlap 1142963 1142964 GGACAAACCATAAAA TCGG CAGG CCGA TCGCAACGCCTACCA TERM 1489 1143369 - 1143357 - G 83 -10.5 -3.93658 | overlap 1143344 AACAGCTCTAAAGAA GCGCC GCT GGCGC GCATACGTTCAAGCG TERM 1490 1143420 - 1143406 - G 70 -10 -3.35522 | overlap 1143404 1143417 CAATGTGGGTAAAGA CGCGTT CAA AACGCG GATCATGCTGGTACG TERM 1491 1144384 - 1144353 - R 72 -6.5 -4.21194 | gap 1, opp_overlap 1144354 1144369, overlap 1144354 CCCGATCATTCAAAA CGGCGGCGCGCG TTAGCTTCT CGCGCGGCGC-G AGCGGTTTCTACAGA SeD_A1149 1144789 - 1144343 - | inner membrane protein YccF TERM 1492 1144369 - 1144389 + g 73 -8.9 -3.85698 | opp_overlap 1144353 1144354 GGCGGCGCGCGTTAG CTTCTCGCG CGG CGCGAGCGG TTTCTACAGAGACGA TERM 1493 1145890 - 1145870 - g 78 -2.3 -5.28176 | overlap 1145871 TGTAGCGAGAAAAAA GCGCAGGCC AAA GGCTGGCGT CAGTGGCTGGAAGAG TERM 1494 1146805 - 1146819 + G 77 -8.6 -4.08216 | GGAAAGTGCGCTTCT TCCTCA GGT TGAGGA TTTTCCGGACGCTGA SeD_A1150 1144913 - 1146967 + | helicase IV TERM 1495 1146997 - 1146969 - T 88 -12.3 -3.61764 | opp_overlap 1146965 1146992, overlap 1146961 1146970 CGAGGAAGCCCTAAA GCGCGGGCGGTAC AGC ATCCCGCCCGCGT AGCGGTTATTTCAGG TERM 1496 1146996 - 1146970 - T 93 -15.8 -2.76737 | opp_overlap 1146965 1146992, overlap 1146961 1146969 GAGGAAGCCCTAAAG CGCGGGCGGTAC AGC ATCCCGCCCGCG TAGCGGTTATTTCAG TERM 1497 1146992 - 1147002 + T 74 -8.2 -3.9122 | opp_overlap 1146970 1146969, overlap 1146965 GGTACAGCATCCCGC CCGC GTA GCGG TTATTTCAGGCGCTC mgsA 1147461 - 1147003 - | methylglyoxal synthase SeD_A1152 1148218 - 1147556 - | hypothetical protein TERM 1498 1147882 - 1147867 - G 77 -8.2 -4.07568 | opp_overlap 1147873 CGTCGCCGTCCAAAA GCGCCA GACG CGGCGC CGCGTTAAAATGCGA TERM 1499 1148845 - 1148808 - R 100 -12.9 -4.86731 | opp_overlap 1148816, overlap 1148809 GCTGGCGAAATAAAA GTTTAAAAGGCCGGATA TCGC TTTCCGGCCTTTTAAAT ACAATCAGTTACGTA TERM 1500 1148844 - 1148809 - R 100 -16.4 -3.51557 | opp_overlap 1148816, overlap 1148808 CTGGCGAAATAAAAG TTTAAAAGGCCGGATA TCGC TTTCCGGCCTTTTAAA TACAATCAGTTACGT TERM 1501 1148816 - 1148837 + r 83 -10.1 -4.1899 | opp_overlap 1148809 1148808 AATAAAAGTTTAAAA GGCCGGATA TCGC TTTCCGGCC TTTTAAATACAATCA SeD_A1154 1149167 - 1148850 - | hemimethylated DNA-binding protein SeD_A1155 1150436 - 1149225 - | protein YccW SeD_A1156 1150651 - 1151199 + | hypothetical protein SeD_A1157 1151216 - 1152004 + | bacterial regulatory protein, AraC family SeD_A1158 1152053 - 1152334 + | acylphosphatase SeD_A1159 1152660 - 1152331 - | sulfurtransferase TusE TERM 1502 1152395 - 1152426 + g 84 -5.8 -5.06414 | TTTGCCGGGCCTTTC GGGAACAGACGATA CAGA TAGCGGCTGTTGCC TTTTTCTTCGCCGAA TERM 1503 1152731 - 1152706 - R 91 -7.5 -5.15634 | overlap 1152710 CAGTGTAGCAAAAAA TAAAGCCCTGC ATAA GCAGGGCTGGA AGAGGGGAATGTCGA TERM 1504 1152727 - 1152710 - R 100 -12.7 -5.0917 | overlap 1152706 GTAGCAAAAAATAAA GCCCTGC ATAA GCAGGGC TGGAAGAGGGGAATG SeD_A1160 1153406 - 1152747 - | inner membrane protein YccA SeD_A1161 1153529 - 1153681 + | hypothetical protein TERM 1505 1153920 - 1153899 - T 83 -10.1 -4.04806 | opp_overlap 1153899 CGCCAGATTAAACAA GGGGTTACC GAAA GGTAGCCCC TTTGTTTTTTAGGCG TERM 1506 1153899 - 1153920 + T 100 -12.3 -5.04249 | opp_overlap 1153899 CGCCAGATTAAACAA GGGGTTACC GAAA GGTAGCCCC TTTGTTTTTTAGGCG SeD_A1163 1154725 - 1154045 - | PipA SeD_A1164 1155822 - 1154947 - | PipB TERM 1507 1156213 - 1156201 - g 71 -4.8 -4.59109 | TAGATGGCGTAAAAA CCTG ATGAG CAGG AATACTTACACACTA SeD_A1165 1156082 - 1156360 + | putative inner membrane protein SeD_A1166 1156711 - 1156370 - | chaperone protein SigE SeD_A1167 1158413 - 1156728 - | inositol phosphate phosphatase SopB TERM 1508 1158779 - 1158791 + G 74 -3.4 -4.88228 | CAAGTAAGACCGTGA CGAA GAATA TTCG TTTTTCCTATTCCAT SeD_A1168 1158775 - 1158915 + | hypothetical protein SeD_A1169 1160697 - 1159135 - | peptidase family C69 TERM 1509 1159695 - 1159705 + g 85 -4.6 -5.14563 | TTCCCTGATAGTGAT TGCG TAA CGCG TTTTTTACTGCCGCC TERM 1510 1160182 - 1160219 + g 75 -3.6 -4.85599 | gap 1 CGATTGCGCCACTGG CAGG-ATCACGGA CTCAATGGCGTCT TCCGTGATTCCTG TTTTTGTCACGTAAG SeD_A1170 1162141 - 1160777 - | heavy metal sensor kinase family protein SeD_A1171 1162814 - 1162134 - | transcriptional activator protein IrlR TERM 1511 1163077 - 1163067 - g 71 -8.2 -3.82208 | overlap 1163059 CAGCAAACAGGCAAA CCGG CGC CCGG CGTGGAGGTGGTACT uraH 1162950 - 1163360 + | hydroxyisourate hydrolase TERM 1512 1163618 - 1163586 - T 76 -12 -2.50443 | overlap 1163585 TTAGATTGTATTAAT CGCCGCGATTTATG GCGAG CAAACATCGCGGCG GGAATAAAAATCTTC hpaC 1164205 - 1163693 - | 4-hydroxyphenylacetate 3-monooxygenase, reductase component hpaB 1165785 - 1164223 - | 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component TERM 1513 1165504 - 1165520 + g 100 -12.3 -4.56597 | AGCATCACGCTGTTG GCGCAGA TCG TCTGCGC TTTTTGCCACGCGGA TERM 1514 1165707 - 1165721 + g 70 -3.4 -4.70266 | AAATATAAATTTCCC GCCCGT CCT GCAGGC TTTTTAAATACTCTT hpaR 1166443 - 1166003 - | homoprotocatechuate degradation operon regulator, HpaR TERM 1515 1166060 - 1166079 + g 76 -2.9 -5.02074 | gap 1, overlap 1166063 AATAAGATCGTCCAG CAGCAGCA TCAAT TGCTG-TG TTTTTTCGGGCGTGA TERM 1516 1167044 - 1167020 - g 72 -11.5 -3.06696 | overlap 1167043 GCCTGCCGGAAGAGA GCTTTTATCGC CCG GCGATTAAAGC GAAATGTCGCGATGG TERM 1517 1167705 - 1167695 - g 87 -8.2 -4.56775 | opp_overlap 1167699 1167702 ATCTGCGGGTAAAAA GCCG CGA CGGC CTGACGCCGATAGGC SeD_A1176 1166719 - 1168008 + | 4-hydroxyphenylacetate degradation bifunctionalisomerase/decarboxylase TERM 1518 1168314 - 1168298 - g 72 -3.5 -4.82667 | opp_overlap 1168311 TCACCAGACTAAAAA CGTGCTG ATC CCGCGCG CCTCGCATAACTTCG hpaE 1168005 - 1169471 + | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase hpaD 1169473 - 1170324 + | 3,4-dihydroxyphenylacetate 2,3-dioxygenase hpcD 1170334 - 1170714 + | 5-carboxymethyl-2-hydroxymuconate delta isomerase TERM 1519 1170936 - 1170915 - g 71 -4.3 -4.60889 | overlap 1170902 1170917 AATCAGGCTGAAAAA CAGCGTGAA CAGA TTCGCGCAG TGTCGCTGGATTATC TERM 1520 1171474 - 1171459 - g 71 -6 -4.2528 | overlap 1171460 GCGTAATCGAAGAAA CCGGCG TCGC CGCAGG CGTGCTGAATCATCC hpaH 1170858 - 1171661 + | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase TERM 1521 1171704 - 1171680 - g 72 -2.1 -4.88129 | overlap 1171673 1171681 1171692 1171702 AAAAACGATGAAAAA TGCTTTCAAAG ACG CGTTAAAAGCG GGGCGTCCGCAAATC hpaI 1171672 - 1172463 + | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 1522 1173130 - 1173151 + G 73 -5.1 -4.65747 | overlap 1173128 TGGCAGTGGTTATTC CTGTTGGAA GGAT TTCCGTCAG TTTTGTTAGGCATTA hpaX 1172536 - 1173912 + | 4-hydroxyphenylacetate permease TERM 1523 1174028 - 1174062 + G 86 -6.5 -5.0538 | gap 1, overlap 1174029 GTATGGCGGATTTCT TTGGTCGTGAT-ATGC AGGC GCATCGCCACGACCAG TTTTTTCAAATGCAC TERM 1524 1174149 - 1174175 + G 71 -4.2 -4.63932 | GGCGCCGCTATTTGT GCTTACGCCGCC CTC GGTGCCGCATGC TTTTATTACCGAATC hpaA 1173922 - 1174818 + | 4-hydroxyphenylacetate catabolism regulatory protein HpaA TERM 1525 1175392 - 1175412 + G 71 -6.2 -4.25104 | gap 1 TTCCCCTTTCCCGGA CGGTGAAGC GTTT GCTT-ACCG TTTTGATACCCAGGG TERM 1526 1175581 - 1175568 - g 72 -3.8 -4.74103 | TTGGCAACGGAAAAA CGCT GGCTGA AGCG ATTGCGTCGCATCAC SeD_A1184 1174832 - 1175770 + | putative periplasmic protein TERM 1527 1175820 - 1175790 - f 84 -10.4 -3.94409 | opp_overlap 1175789 1175794 1175809, overlap 1175791 1175794 CAGAGCAGGGATAAA CCCACGGGCTGACA TGA TGTCAGCCCGTTAT GCTTTTGGCGATCAG TERM 1528 1175819 - 1175791 - f 85 -13.9 -2.96164 | opp_overlap 1175789 1175794 1175809, overlap 1175790 1175794 AGAGCAGGGATAAAC CCACGGGCTGACA TGA TGTCAGCCCGTTA TGCTTTTGGCGATCA TERM 1529 1175794 - 1175816 + F 100 -17.8 -3.68359 | opp_overlap 1175791 1175790 1175794, overlap 1175789 1175809 GCAGGGATAAACCCA CGGGCTGACA TGA TGTCAGCCCG TTATGCTTTTGGCGA TERM 1530 1175816 - 1175794 - f 100 -17.8 -2.71325 | opp_overlap 1175794 1175789 1175809, overlap 1175791 1175790 GCAGGGATAAACCCA CGGGCTGACA TGA TGTCAGCCCG TTATGCTTTTGGCGA SeD_A1185 1176988 - 1177143 + | hypothetical protein TERM 1531 1177174 - 1177145 - T 82 -11.4 -3.64703 | gap 1, opp_overlap 1177146, overlap 1177146 CCGGGTGCATGTAAA TCCG-GGGTGGGC AGAAA GCCCACCCTCGGT TTATTGCCTTTATCG TERM 1532 1177146 - 1177173 + T 100 -14.9 -4.30933 | gap 1, opp_overlap 1177145 1177146 CGGGTGCATGTAAAT CCG-GGGTGGGC AGAAA GCCCACCCTCGG TTTATTGCCTTTATC TERM 1533 1177173 - 1177146 - T 87 -14.9 -2.78679 | gap 1, opp_overlap 1177146, overlap 1177145 CGGGTGCATGTAAAT CCG-GGGTGGGC AGAAA GCCCACCCTCGG TTTATTGCCTTTATC SeD_A1186 1177499 - 1177194 - | chaperone modulatory protein CbpM SeD_A1187 1178419 - 1177499 - | curved DNA-binding protein TERM 1534 1178010 - 1178028 + g 74 -7.4 -4.1552 | overlap 1178007 GAATAGCTAATCGTA CGCTGG TGCTCTT CCAGCG TTTCTTCCAGGAATA SeD_A1188 1178655 - 1179017 + | membrane protein, suppressor for copper-sensitivity A TERM 1535 1180192 - 1180203 + G 72 -3.6 -4.74103 | TGTTGTTTAGCGCCA GCCT GTTC GGGC TTTTTGAGTTCAGGC TERM 1536 1180351 - 1180388 + G 95 -14.1 -3.37612 | overlap 1180353 GCACGGCGGTCGCCG TGGCGCTCACGGCGTCG CTGC CGACGCTGTGGGGGCTG TTCCTTGCGCTTGGC TERM 1537 1180353 - 1180386 + G 100 -16.7 -3.25539 | overlap 1180351 ACGGCGGTCGCCGTG GCGCTCACGGCGTCG CTGC CGACGCTGTGGGGGC TGTTCCTTGCGCTTG SeD_A1189 1179066 - 1180952 + | membrane protein, suppressor for copper-sensitivity B SeD_A1190 1180949 - 1181572 + | suppressor for copper-sensitivity C TERM 1538 1181562 - 1181549 - f 83 -4.5 -5.27335 | overlap 1181550 GTGGTGAAAGAAAAA CTGGC GGCT GCCAA TGGCGGGTAAACTGC TERM 1539 1181574 - 1181601 + G 77 -4.8 -4.84359 | gap 1 CCAATGGCGGGTAAA CTGCGGCGTTGGC TGC GTGAA-GCCGCGG TTTTTCTGGCGCTCC TERM 1540 1181865 - 1181831 - g 86 -10.6 -4.19238 | GGCGGAAGGGGAAAA CGTCATGACCGTTGCG CTC CGCTCCGGCGATGACG CTGAGGTTGCCCGCT SeD_A1191 1181562 - 1182068 + | suppressor for copper-sensitivity D TERM 1541 1182093 - 1182072 - f 82 -12.9 -3.03903 | opp_overlap 1182067 1182066 AAAACGTTCTGAATA TGCGCCGGG GTTT CCCGGCGCT AACGCGTTTACTGTA SeD_A1192 1182201 - 1183442 + | glucose-1-phosphatase TERM 1542 1183450 - 1183468 + T 79 -8.1 -4.28791 | gap 1, overlap 1183450 1183456 CAAAATAGCCGTATG C-CCCCGC GCAG GCGGGGCG TTTGTGTTATACGTT SeD_A1193 1183702 - 1183475 - | putative cytoplasmic protein wrbA 1184319 - 1183723 - | NAD(P)H:quinone oxidoreductase, type IV SeD_A1195 1184704 - 1184871 + | hypothetical protein TERM 1543 1184931 - 1184948 + F 100 -14.1 -6.02919 | CGTCATGCGCCACCG CCGCCGG ATTT CCGGCGG TTTTTTTGTTTATAA TERM 1544 1185448 - 1185431 - g 74 -3.4 -4.84527 | gap 1 TTGATAGATGAAAAA TCCGCGC TGATT GC-CGGA TGGGTGCACAGCGGG SeD_A1196 1185008 - 1185646 + | HTH-type transcriptional regulator RutR SeD_A1197 1186038 - 1185643 - | putative periplasmic protein TERM 1545 1186080 - 1186063 - R 93 -9.1 -4.7373 | opp_overlap 1186063 TGACGCGAGTAAAAA GGCTCCA TTGA CGGAGCC TTAATTAACCACAGT TERM 1546 1186120 - 1186142 + r 75 -9.8 -3.59979 | TTGTCATCAGGCTGG CATTACCGCC AGC GGCGGCAGTG TTTACGCTCAGCGAA SeD_A1198 1190059 - 1186097 - | proline dehydrogenase family protein TERM 1547 1186517 - 1186573 + g 78 -12.2 -3.28791 | gap 2, overlap 1186518 CGTCCAGGTATTGCG CTCGCCGGTC-GGCCCCGG-TAGCAGGC GCT GCGTGCCGGCCTGGGCCAGATCGGCGAA TTGTCGGCAGAGCGT TERM 1548 1186518 - 1186572 + g 85 -15.7 -2.57132 | gap 2, overlap 1186517 GTCCAGGTATTGCGC TCGCCGGTC-GGCCCCGG-TAGCAGGC GCT GCGTGCCGGCCTGGGCCAGATCGGCGA ATTGTCGGCAGAGCG TERM 1549 1189910 - 1189922 + g 74 -7.7 -4.1585 | overlap 1189907 CGCAGGTAGCTCCGG TAGCG TAT CGCTA TTTTCCAGCTTGTCC TERM 1550 1190593 - 1190611 + G 70 -6.6 -4.19371 | overlap 1190608 TGACTATATTCTTGG CGGTCGCA GCC TGGGGCCG TTTGTTACGGCTTTA putP 1190480 - 1191988 + | sodium/proline symporter TERM 1551 1192024 - 1191993 - T 78 -12.4 -2.65808 | opp_overlap 1191993 1191995, overlap 1191990 1191989 AGGCGGAATAACCGA CATGTCCGATAGCA TTAT CGCCATCGGACATA TTTTACCAGGCGGCG TERM 1552 1191993 - 1192024 + T 71 -7.3 -4.07568 | opp_overlap 1191990 1191989 1191993, overlap 1191995 AGGCGGAATAACCGA CATGTCCGATAGC ATTATC GCCATCGGACATA TTTTACCAGGCGGCG TERM 1553 1191995 - 1192022 + T 75 -9.9 -3.63744 | opp_overlap 1191993 1191990 1191989, overlap 1191993 GCGGAATAACCGACA TGTCCGATAGC ATTATC GCCATCGGACA TATTTTACCAGGCGG TERM 1554 1192030 - 1192055 + T 90 -15.5 -2.66964 | gap 1, opp_overlap 1192025, overlap 1192027 ATCGGACATATTTTA CCAGGC-GGCGT TAT ACGCCTGCCTGG TCCTCTGATAAGTCC TERM 1555 1192794 - 1192779 - T 74 -5.4 -4.56597 | overlap 1192788 GCGTCGTTTCAAAAA GCAAGC TAAG GCTTAC AAGGAAGCCAACCCT TERM 1556 1192847 - 1192830 - T 73 -11.3 -2.57132 | opp_overlap 1192828 1192825, overlap 1192829 GTGTGTGCGCATAAT CGCGTTC AAGA GAACGCG GGTGATGTATACCTA TERM 1557 1193627 - 1193637 + T 74 -8.2 -3.85698 | CAAAGACGACTGCGT GCGC TCG GCGC TTTGTCAGCGAACGC TERM 1558 1193685 - 1193708 + T 95 -14.6 -3.58905 | opp_overlap 1193677, overlap 1193689 TATAGCATTGACTTT CAGAGCCCGG GAGA CCGGGCTTTG TTGTCTATAAAGCGT TERM 1559 1193689 - 1193704 + T 100 -11.8 -4.42974 | opp_overlap 1193677, overlap 1193685 GCATTGACTTTCAGA GCCCGG GAGA CCGGGC TTTGTTGTCTATAAA SeD_A1202 1194656 - 1193775 - | transcriptional regulator, RpiR family SeD_A1203 1196438 - 1194942 - | sodium-glucose/galactose cotransporter TERM 1560 1195177 - 1195163 - G 74 -2.8 -4.86731 | CTCGTTTAAAGAAAA TGCCCA GCA TGAACA GACCGGTCATTGGCC TERM 1561 1196601 - 1196580 - R 79 -8.7 -4.24948 | TCATGAGATGTAAAA GGCAGAGCA TTTA TGCTCCACC AATGGTGATGCCCAG SeD_A1204 1197455 - 1196775 - | bifunctional enzyme NanE/nanK TERM 1562 1196993 - 1196956 - G 77 -11.3 -3.58343 | opp_overlap 1196954 GTCACCATTGCCAAA TCTGGCTCAACCGGC GTGATGGG GCCGGTATAGCCAGA CAGTGTTGTACCAAT TERM 1563 1197387 - 1197414 + g 71 -6.3 -4.35518 | gap 1 AGGGCTGCCTGGTAC CGGTTGGCATGA GACAA TCA-GCCCACCG TTTTCGTGTACACTT TERM 1564 1198296 - 1198284 - g 100 -5.5 -5.81412 | CGTAGGGAAAAAAAA CAGTG AAT CACCG TTGCAGGTTTATAGC TERM 1565 1199081 - 1199099 + G 71 -6.1 -4.25056 | CGTCTGTAACCTCCT TTACCAT GCGTG ATGGTAA TTTATTAATAAAATA SeD_A1205 1197961 - 1199115 + | hypothetical protein SeD_A1206 1199160 - 1199852 + | oligogalacturonate-specific porin TERM 1566 1202242 - 1202229 - g 81 -2.4 -5.41746 | overlap 1202233 AAGCGGGCAAAAAAA CACA CTTTCT TGTG CATGAAAGCCAGGCG SeD_A1209 1201430 - 1202533 + | putative oxidoreductase YjhC SeD_A1210 1202978 - 1202700 - | GTP cyclohydrolase II SeD_A1211 1203072 - 1203242 + | hypothetical protein SeD_A1212 1203281 - 1203406 + | hypothetical protein TERM 1567 1203554 - 1203564 + T 76 -4.6 -4.96848 | AGCTCTGTTCAAAAA CGCT CCC GGCG TTTTTGTGTCGAACC TERM 1568 1203650 - 1203631 - T 100 -10 -4.9755 | opp_overlap 1203629 1203631 ATATATAAGCAAAAA GCCCGTAC TTCT GTACGAGC TCTTTCTTGAATATG SeD_A1213 1204428 - 1204294 - | hypothetical protein SeD_A1214 1204796 - 1204425 - | hypothetical protein SeD_A1215 1206137 - 1205265 - | putative peptidoglycan-binding LysM TERM 1569 1205581 - 1205593 + g 74 -2 -5.02287 | GTATCTTCATTTTCA TTGT CATAA ACAA TTTTATCTTTTTCTG SeD_A1216 1206649 - 1206170 - | HNH endonuclease domain protein SeD_A1217 1208029 - 1206665 - | ImpA domain protein TERM 1570 1206961 - 1206984 + g 71 -8 -3.91434 | opp_overlap 1206951 1206947, overlap 1206962 1206975 1206977 AGTCACGCAGATTCT GGCGCGCCTG CTGC CAGCCGCGCA TTTGTGGGCTGCTTT TERM 1571 1206962 - 1206983 + g 71 -11.5 -2.94137 | opp_overlap 1206951 1206947, overlap 1206961 1206975 1206977 GTCACGCAGATTCTG GCGCGCCTG CTGC CAGCCGCGC ATTTGTGGGCTGCTT TERM 1572 1207887 - 1207876 - G 75 -5.8 -4.57073 | CATGGGCTTTAAAAA TGGC CAGC GCCA GCGATTCCACCAGTT SeD_A1218 1211501 - 1208040 - | Pmt1 TERM 1573 1209372 - 1209386 + g 77 -11.4 -3.54543 | CGCCGTCAGTTCGAT CAGCGC GTC GCGCTG TTTGACAAAATAACT SeD_A1219 1212992 - 1211580 - | ImpA domain protein TERM 1574 1212073 - 1212085 + g 80 -4.7 -5.04987 | TCGAGCCAGTACGGG GCCAG CAG CAGGC TTTTTTCCACCTGTT TERM 1575 1212651 - 1212624 - G 74 -10.6 -3.53224 | opp_overlap 1212622 1212624 1212630 CACGCCGGTTTCAAA GCGTTTCAGCAC CTGG GTGGCGAAACGC TGTTTATGTGCCGCA SeD_A1220 1213731 - 1212994 - | type VI secretion-associated protein TERM 1576 1213178 - 1213153 - G 74 -11.1 -3.30124 | gap 1, opp_overlap 1213152 1213151 GTCGATGCCGGATAA GC-CCCGGCTGG ACT CCAGCAGGGTGC CGTTTTCGCGGATAA TERM 1577 1213396 - 1213422 + g 76 -5.1 -4.72272 | gap 1, overlap 1213374 GCTCTGCGTCATTAT CAGCGCGGTGGA GTTG TCCGG-GCGCTG TTTTTCCTGGGCGAA clpB 1216463 - 1213728 - | chaperone protein clpB TERM 1578 1214590 - 1214562 - G 87 -13.7 -3.21218 | overlap 1214563 ACCGGCCAGCAGGAA CGCGCCGAGCGGG CGT CCCGGACGGCGCA GATCGGCGCGGGCGG TERM 1579 1214589 - 1214563 - G 83 -15 -2.52516 | overlap 1214562 CCGGCCAGCAGGAAC GCGCCGAGCGGG CGT CCCGGACGGCGC AGATCGGCGCGGGCG TERM 1580 1214673 - 1214700 + g 71 -6.2 -4.36914 | overlap 1214679 GTCGCCCAGCCACTG CGGCAGGTCGGT GATG ACCGACATTTCG TTTTGTGACAGGCGG TERM 1581 1215530 - 1215569 + g 74 -11.4 -3.18264 | gap 1 GGTTGGAGATATCCA GCCCGCCCTGCTGGTTGCC CGC GCCAATCAGC-GTGTGGGC TTCGTCGATAAACAG TERM 1582 1216096 - 1216144 + g 71 -9.6 -3.53012 | gap 1, opp_overlap 1216100 TAGCGCAACGGCGAA TGCAGCAGGGCGAGCAGCAGC ACGCCGCC GC-GCAGTTCGGTCTGCTGCA TTTCCGCGGAGGCCA SeD_A1222 1217234 - 1216476 - | Aec26 TERM 1583 1216581 - 1216557 - G 72 -4.1 -4.80289 | overlap 1216559 ATAAAACAGATAAAA CAGCGCCAGCA CGA CGATGCCGCCG CACAGAACATGCCGG TERM 1584 1216626 - 1216636 + g 93 -4.6 -5.67967 | AATCAGCTGATAGCG CCCG CCC TGGG TTTTTTTATCCTGGT TERM 1585 1217160 - 1217188 + g 76 -12.5 -2.77534 | gap 1, overlap 1217160 GTTCAGGCTGTTGCC GCGCAGCGCCAG CTGATA CTGGCGCTG-GC CTTCTCTCTCGTATC TERM 1586 1217160 - 1217189 + g 70 -9.2 -3.6336 | overlap 1217160 GTTCAGGCTGTTGCC GCGCAGCGCCAG CTGATA CTGGCGCTGGCC TTCTCTCTCGTATCC SeD_A1223 1218570 - 1217239 - | hypothetical protein TERM 1587 1217457 - 1217471 + g 74 -4.3 -4.68593 | CCATATTGCGGATTT TTTCC GGCGA GGAAA TTTTTGACTGCTGGA SeD_A1224 1219106 - 1218573 - | type VI secretion lipoprotein family protein SeD_A1225 1220389 - 1219103 - | hypothetical protein TERM 1588 1219330 - 1219369 + g 74 -10.1 -3.75024 | opp_overlap 1219323 1219354, overlap 1219335 GCGAGAAGGCGTCCA G-CAGCACGCGCAGCGATT CCAC AATCGCGGCGCG-GTTGGC TTCTTCGTGATGACG TERM 1589 1219335 - 1219364 + g 78 -12.1 -3.30203 | opp_overlap 1219323 1219354, overlap 1219330 AAGGCGTCCAGCAGC ACGCGCAGCGATT CCAC AATCGCGGCGCGG TTGGCTTCTTCGTGA TERM 1590 1219781 - 1219763 - G 71 -7.3 -3.95073 | opp_overlap 1219763 CGGCAGATCCATAAA CGGCGTG TTGAT CCCGCCG TTTATCGCCGGATCG SeD_A1226 1221502 - 1220414 - | hypothetical protein TERM 1591 1221289 - 1221266 - GR 75 -9.6 -3.60098 | gap 1 ATCGCTTACCGGAAA TCCCAGGCTGG CGT CC-GCCTGGAA ACGAATGGTTTCCTG TERM 1592 1221412 - 1221390 - GR 76 -2.7 -5.04385 | gap 1, overlap 1221391 GAGAGCGCGAAAAAA TTGCAGG-CG CAGG CGTCCTGAAA CAACGGCTCCCGCAG SeD_A1227 1223319 - 1221466 - | VasA SeD_A1228 1223740 - 1223324 - | hypothetical protein TERM 1593 1223661 - 1223687 + g 100 -18 -4.08216 | opp_overlap 1223658 GCCTCTATATTACTG CCCTCCCGCCAG TTT CTGGCAGGAGGG TTTTCCAGACGCTCA SeD_A1229 1225209 - 1223737 - | hypothetical protein SeD_A1230 1225470 - 1225258 - | hypothetical protein SeD_A1231 1226003 - 1225500 - | type VI secretion protein TERM 1594 1226132 - 1226147 + G 73 -6.2 -4.39226 | opp_overlap 1226131, overlap 1226139 CACTTTTTCAAAATG GAATAC AGGA GTATTC TTCTTTTGTGGTTAT SeD_A1232 1226060 - 1226239 + | hypothetical protein SeD_A1233 1226633 - 1227151 + | hcp TERM 1595 1227200 - 1227153 - f 76 -9 -3.66178 | opp_overlap 1227162, overlap 1227162 CGCTGGAAGCGTAAA CGGAATCAACAGCATCCCGCCC TGAC GGGCAGGGTGCTGTTTTTGCCT GGAGACGGAGGTAAA TERM 1596 1227162 - 1227191 + F 100 -15.7 -4.65895 | opp_overlap 1227153 1227162 CGTAAACGGAATCAA CAGCATCCCGCCC TGAC GGGCAGGGTGCTG TTTTTGCCTGGAGAC TERM 1597 1227191 - 1227162 - f 100 -15.7 -3.43217 | opp_overlap 1227162, overlap 1227153 CGTAAACGGAATCAA CAGCATCCCGCCC TGAC GGGCAGGGTGCTG TTTTTGCCTGGAGAC TERM 1598 1227745 - 1227725 - g 77 -3.9 -5.10968 | ATGAAGACATAAAAA GCATTCTCG GGA CGATACTGC AGGAAAACGGCGTGA TERM 1599 1228273 - 1228244 - g 74 -7.9 -4.13767 | gap 2, opp_overlap 1228262 TGGCGCAGGGGAAAA GCCGTTCGCCGGC GATATG GCCGG-G-ACGGC GTATTCAGCTGACGG SeD_A1234 1227373 - 1229487 + | type VI secretion system Vgr family protein TERM 1600 1230332 - 1230379 + G 76 -9.6 -3.78793 | opp_overlap 1230313, overlap 1230335 1230337 1230338 GCGGCGCTACCGGCT GGTGCTGACCACGCAGGCGCAG CGCG CGGCGCAGGCGGCGTCAGCGTC TTCTTCGTCATTATC TERM 1601 1233788 - 1233778 - g 75 -6.8 -4.41348 | CTGTCCGCAAAGAAA TGGG AAT CCCA CCAAGGATGAAATAC SeD_A1235 1229589 - 1233806 + | protein RhsA SeD_A1236 1234753 - 1234896 + | hypothetical protein SeD_A1238 1236122 - 1236421 + | IS3 OrfA TERM 1602 1237357 - 1237340 - T 82 -6.9 -4.77986 | opp_overlap 1237340, overlap 1237342 CCAAAGACTTAAAAA GCGGAGC GACA GCTCCTC TGGATTTATGTCAGC SeD_A1241 1238188 - 1237409 - | hypothetical protein TERM 1603 1237621 - 1237664 + g 100 -9 -5.31275 | gap 1, opp_overlap 1237611 1237621 GATAACGCAACGATA CGCTGTC-GGTCAGTTTTTCA TTT TTAAAATCTGACCAGACGGTG TTTTTTGTCATGGCG TERM 1604 1237953 - 1237969 + g 83 -10.9 -3.92522 | opp_overlap 1237953 1237942 AGAATGACGGCAGAA TTCAGCG GTA CGCTGAA TTTCTCACCTTCCAG TERM 1605 1237969 - 1237953 - G 73 -10.9 -3.35283 | opp_overlap 1237953, overlap 1237942 AGAATGACGGCAGAA TTCAGCG GTA CGCTGAA TTTCTCACCTTCCAG TERM 1606 1238671 - 1238659 - R 85 -3.5 -5.4588 | TAAAACCAGAAAAAA TAAAA TAT TTTTA ATGAAGGGAAAGGAT TERM 1607 1239061 - 1239048 - R 70 -5.3 -4.38927 | GTTCGACAGAACAAA GAAAG ATTA CTTTC CTGTCTATCATTTTC TERM 1608 1239946 - 1239921 - R 71 -9.9 -3.21924 | gap 1, opp_overlap 1239926, overlap 1239926 CCATGGTTCACAATA CAG-AACATCGA CAT TCGATGTTACTG AGCAAAACCCGTTTG TERM 1609 1239940 - 1239926 - R 72 -8.6 -3.72788 | opp_overlap 1239926, overlap 1239921 GTTCACAATACAGAA CATCGA CAT TCGATG TTACTGAGCAAAACC TERM 1610 1240069 - 1240083 + r 87 -7.1 -5.24129 | opp_overlap 1240069 AAATAATTCATATTA GCTCC GTACA GGAGC TTTTTTATGCCCGGA TERM 1611 1240301 - 1240277 - R 100 -17.9 -3.78934 | opp_overlap 1240280, overlap 1240280 CTTGCCCTATAATAA CAAGCCCGCGC TAA GCACGGGCTTG AATAACATAAAGCGT TERM 1612 1240298 - 1240280 - R 100 -13.8 -4.02817 | opp_overlap 1240280, overlap 1240277 GCCCTATAATAACAA GCCCGCGC TAA GCACGGGC TTGAATAACATAAAG TERM 1613 1240280 - 1240298 + r 78 -11.6 -3.06796 | opp_overlap 1240280 1240277 GCCCTATAATAACAA GCCCGCGC TAA GCACGGGC TTGAATAACATAAAG SeD_A1245 1240716 - 1240318 - | outer membrane protein N TERM 1614 1241852 - 1241837 - H 100 -10.4 -6.25741 | opp_overlap 1241837 AAAGAATAAAAAAAA CCGGCA TAAA TGCCGG TAATGTGGGTAATGA TERM 1615 1241837 - 1241852 + H 71 -10.4 -2.65264 | opp_overlap 1241837 AAAGAATAAAAAAAA CCGGCA TAAA TGCCGG TAATGTGGGTAATGA TERM 1616 1242452 - 1242436 - g 75 -5.7 -4.56597 | CCGGCCTCGCAAAAA CAGGGGG TAT CCCGCCG ACACTAAGCCAGAAA SeD_A1247 1242212 - 1242490 + | outer membrane protein N SeD_A1248 1242570 - 1243265 + | metal dependent phosphohydrolase TERM 1617 1243939 - 1243917 - g 76 -3.2 -5.06414 | opp_overlap 1243918, overlap 1243918 1243919 CGTTTCCAAGAAAAA TGCGTTGGGC CGC GCCCACGGCT TTGCCTGCGAGACTC TERM 1618 1244374 - 1244364 - g 71 -4.6 -4.62069 | overlap 1244367 TCGCTACGCGAAAAA GCAC CAG GCGC GGGGAAACGGTTTTG SeD_A1249 1243339 - 1244769 + | modification methylase EcoRII TERM 1619 1245193 - 1245157 - g 76 -12.4 -3.02144 | gap 2, opp_overlap 1245146 1245145 GGAGCGCCTGGAAGA GTGGATCTGCG-GC-GGC GGC GCCAGCGCGCAGATCGAC ACCCAGGGGATTCAT SeD_A1250 1244750 - 1245220 + | very short patch repair protein SeD_A1251 1246129 - 1245209 - | carboxylate/amino acid/amine transporter TERM 1620 1246236 - 1246221 - H 72 -3.2 -5.06414 | opp_overlap 1246229 1246229 CTTTTGGAATAAAAA GGCG TTGACCCG CGCC GCCGGTTTCGGCATT SeD_A1252 1246305 - 1247216 + | inner membrane protein YedI TERM 1621 1247503 - 1247484 - f 100 -12.1 -4.4648 | opp_overlap 1247484 AGCCCGATGACAAAA CGCCCGG TTAATG CCGGGCG TTTTGCTGTGGAGAA TERM 1622 1247484 - 1247503 + F 95 -12.8 -4.34402 | opp_overlap 1247484 AGCCCGATGACAAAA CGCCCGGT TAAT GCCGGGCG TTTTGCTGTGGAGAA TERM 1623 1248291 - 1248311 + G 70 -8.9 -3.64703 | opp_overlap 1248282 1248294, overlap 1248294 1248299 AGCCAACGGCGTAAC CCACAGCGC GGC GTGCGGTGG TTTACCTCCGCACAG SeD_A1253 1247643 - 1249355 + | cellulose synthesis regulatory protein SeD_A1254 1250170 - 1249334 - | mannosyl-3-phosphoglycerate phosphatase homolog SeD_A1255 1250284 - 1250406 + | hypothetical protein TERM 1624 1250443 - 1250463 + T 100 -12.5 -5.41746 | overlap 1250455 1250456 CATAAGCAAGTTTGA TCCCGACCC GTA GGGCCGGGA TTTTTTTCGGCCATT SeD_A1257 1250707 - 1250480 - | hypothetical protein TERM 1625 1250889 - 1250867 - g 100 -16.2 -4.14392 | GGGTAACCGTTAAAA CGGACGGCGG TCC CCGCCGACCG GGCGTGGTACTGGCA SeD_A1258 1250833 - 1251030 + | hypothetical protein rcsA 1251692 - 1251069 - | colanic acid capsular biosynthesis activation protein A SeD_A1260 1251763 - 1251650 - | hypothetical protein fliR 1252768 - 1251974 - | flagellar biosynthetic protein FliR fliQ 1253046 - 1252777 - | flagellar biosynthetic protein FliQ fliP 1253793 - 1253056 - | flagellar biosynthetic protein FliP TERM 1626 1253387 - 1253405 + g 71 -11 -2.91772 | opp_overlap 1253387 1253386, overlap 1253386 1253374 TGGCGCAACATGAAC GCGCGTAA CGG TTGCGCGC CTTTATCCAGCGCTT TERM 1627 1253668 - 1253658 - G 74 -6.8 -4.26903 | opp_overlap 1253665 GCGAGGTGATGAAAA CCAG CGT CTGG ACGGATAATGACCAG SeD_A1264 1254170 - 1253793 - | flagellar protein FliO TERM 1628 1254122 - 1254096 - G 70 -9.5 -3.38727 | gap 1, overlap 1254077 1254097 AATAATGCCAATTAA TGCGCCGCTCAC CTGC ATGAGCGGCG-A TCCGGCTGGCGCGGT fliN 1254583 - 1254170 - | flagellar motor switch protein FliN TERM 1629 1254483 - 1254472 - G 74 -7.2 -4.08692 | opp_overlap 1254451 1254474 CAAGCTGTTGGAAAA CCGC GTCG GCGG CGCTTTTATTGGTGG TERM 1630 1254474 - 1254486 + g 81 -6.9 -4.73613 | opp_overlap 1254472, overlap 1254451 AGCTGTTGGAAAACC GCGTC GGC GGCGC TTTTATTGGTGGTCG fliM 1255584 - 1254580 - | flagellar motor switch protein FliM TERM 1631 1255190 - 1255177 - G 71 -9.5 -3.53224 | GACTTTGGTCGGAAA GCGGC CGTC GCCGC CAAACAGGTTATCGA fliL 1256056 - 1255589 - | flagellar basal body-associated protein FliL TERM 1632 1255914 - 1255889 - G 80 -4.5 -5.05782 | opp_overlap 1255903, overlap 1255891 ATCCAGCGCAAAAAA TACCGGCGCGG GCGG CGGAGCCGGTT CCGCTTTAGCGTTCG TERM 1633 1255912 - 1255891 - G 70 -7.1 -4.15748 | opp_overlap 1255903, overlap 1255889 CCAGCGCAAAAAATA CCGGCGCGG GCGG CGGAGCCGG TTCCGCTTTAGCGTT TERM 1634 1256019 - 1256030 + g 84 -5.8 -5.1356 | opp_overlap 1256018 AAAGGTATCCAAATC GAGC GTTT GCTC TTTTTGTTAATCGCG SeD_A1268 1257378 - 1256161 - | flagellar hook-length control protein TERM 1635 1256748 - 1256789 + g 70 -5 -4.49644 | gap 2, overlap 1256756 GCGTCAGTGCTGGCC CCGTGGCG-CGATCGT-CGC TGGC GCGCGCAAGCGACGCCTCGG TTTTCCCTTTTTCAT fliJ 1257818 - 1257375 - | flagellar protein FliJ fliI 1259210 - 1257840 - | flagellar protein export ATPase FliI fliH 1259917 - 1259210 - | flagellar assembly protein FliH fliG 1260905 - 1259910 - | flagellar motor switch protein FliG fliF 1262628 - 1260898 - | flagellar M-ring protein FliF TERM 1636 1261334 - 1261319 - GH 72 -2.5 -4.91109 | CGTTTATCAGAAAAA CCCAT CGCTTC ACGGG TTAAATCCTCGATCT TERM 1637 1261520 - 1261550 + gH 77 -9 -3.93004 | TGCGTATTGCGCGGG CCAGCACTGTTACT GTT GGTACTGGTGCTGG TTTGTGGCGTATTCT SeD_A1274 1262613 - 1262741 + | hypothetical protein fliE 1262788 - 1263102 + | flagellar hook-basal body complex protein SeD_A1276 1263608 - 1263222 - | putative 50S ribosomal protein TERM 1638 1263618 - 1263605 - G 73 -5.3 -4.55295 | overlap 1263606 CTGTGCATAAATAAA TCATC ACCT GATGA TGTCAGTGAGTAAAA TERM 1639 1263867 - 1263839 - R 70 -9.5 -3.05597 | opp_overlap 1263838, overlap 1263838 GTTATGCCGTAAAAG GTCTCCCGCCGTA ACG TACAGCGGGAGTA TGCGCTTATTTTTGA SeD_A1277 1264106 - 1263873 - | hypothetical protein SeD_A1278 1265308 - 1264103 - | hypothetical protein TERM 1640 1264925 - 1264901 - G 77 -4.1 -5.0133 | GATCCCGGTAAAAAA GGCGGCCAGGT TAC ACCCCATCGCC AGACGCGCGCCGAAG TERM 1641 1265176 - 1265155 - G 80 -8.7 -4.20883 | opp_overlap 1265159 CAAAAAGCTGCAAAA TTTGCCCGC CCCA GCGGGTAAA TTCGCCCGTCACGGC TERM 1642 1265590 - 1265576 - g 70 -7 -4.08945 | ATGATGTGGTGAAAA CGCCCG CGC CGGCCG GTCTGGAAGGGTACT SeD_A1279 1265494 - 1265907 + | YedD TERM 1643 1265895 - 1265882 - T 82 -5.9 -5.24129 | opp_overlap 1265849, overlap 1265883 1265884 CCGCGTTAGAAAAAA CGCCG CTGC CGACG CCGCTGCCGTAATTT SeD_A1280 1267431 - 1265947 - | cytoplasmic alpha-amylase TERM 1644 1267080 - 1267095 + g 74 -4.7 -4.8048 | CCTGATTCACGCGCT GAACG CGAATA CGTTC TTTTTCGTCTGCGCC TERM 1645 1267430 - 1267479 + g 100 -16.6 -4.25104 | opp_overlap 1267448, overlap 1267431 AACGTGGGGTTTTTC ATCTTCCGTGCTCCAGAAGTCG TTTAGC CGACCTCTGGAGTATGGAAGAA TTTTCATACGAGACG TERM 1646 1267431 - 1267478 + r 100 -20.1 -3.14848 | opp_overlap 1267448, overlap 1267430 ACGTGGGGTTTTTCA TCTTCCGTGCTCCAGAAGTCG TTTAGC CGACCTCTGGAGTATGGAAGA ATTTTCATACGAGAC SeD_A1281 1267871 - 1267503 - | flagellar protein FliT fliS 1268278 - 1267871 - | flagellar protein FliS SeD_A1284 1269699 - 1268293 - | flagellar hook-associated protein 2 TERM 1647 1268615 - 1268627 + gH 76 -2.7 -5.0925 | AGCGCTTTTTTAAGC TTGGT ATC ATCAA TTTTTAGTTTTCCGG SeD_A1283 1269698 - 1269937 + | hypothetical protein TERM 1648 1270377 - 1270363 - g 71 -10 -3.55622 | TTTAACGGTGTTAAA GTCCTG TCT CAGGAC AACCAGATGAAAATC SeD_A1285 1269955 - 1271472 + | phase-1 flagellin TERM 1649 1271511 - 1271526 + F 100 -10.4 -5.26875 | opp_overlap 1271511 GTGGTACACAATCAA GGCAGC GAAA GCTGCC TTTTTTAATTCCGGA TERM 1650 1271526 - 1271511 - f 79 -10.4 -3.49618 | opp_overlap 1271511 GTGGTACACAATCAA GGCAGC GAAA GCTGCC TTTTTTAATTCCGGA TERM 1651 1272512 - 1272491 - g 73 -5.9 -4.386 | overlap 1272492 TAATTCTCTATAAAA TTTGGGAAA ATAA TTTCCCCAA CCAGCCGAATGTCGA SeD_A1286 1271551 - 1272756 + | lysine-N-methylase TERM 1652 1272764 - 1272787 + F 87 -10.2 -4.04318 | TGACATAGTTTTGTT CGGGGTGGGC TTTT GCGCATCCCG TTTATCCTATCTGGC SeD_A1287 1272983 - 1273672 + | RNA polymerase sigma factor for flagellar operon fliY 1274429 - 1275229 + | cystine-binding periplasmic protein TERM 1653 1275299 - 1275316 + F 89 -5.5 -5.67283 | gap 1, opp_overlap 1275299 ATGTCAGCAAACGGA GGCGCGTG AAT CG-GCGCC TTTTTTATTTCCGTT SeD_A1290 1275383 - 1276369 + | D-cysteine desulfhydrase SeD_A1291 1276390 - 1277058 + | amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein TERM 1654 1277267 - 1277238 - g 73 -9.3 -3.78775 | GCGGGCACCATTAAA GTGGGCGGTAT TATCATCG ATACCGCCCGC CCATTCAGCCAGCAA SeD_A1292 1277055 - 1277807 + | putative ABC transporter, ATP-binding protein SeD_A1293 1278040 - 1278762 + | regulatory protein SdiA TERM 1655 1278795 - 1278821 + T 100 -12.2 -5.1861 | opp_overlap 1278795, overlap 1278810 GCGCCAGACGCGAAA CCGGCTGAAAGC GAT GCTAACAGCCGG TTTTTTACTACTGGC TERM 1656 1278821 - 1278795 - T 88 -12.2 -3.63627 | opp_overlap 1278795 1278810 GCGCCAGACGCGAAA CCGGCTGAAAGC GAT GCTAACAGCCGG TTTTTTACTACTGGC SeD_A1294 1279053 - 1278829 - | hypothetical protein SeD_A1295 1279205 - 1279050 - | putative inner membrane protein uvrY 1279517 - 1280173 + | response regulator UvrY TERM 1657 1281256 - 1281208 - g 78 -6.6 -4.53303 | opp_overlap 1281211 1281253 CATGTCCAGACAAAA CCGCGTGGCGATCGCGCCCG-TTA TCT CAAGCTGGCGCGGAC-CAACGCGG CAACGGCCTTAATCA TERM 1658 1281589 - 1281577 - g 70 -6.9 -4.09864 | ATCGACGGCGGAAAA GGGCA GCT CGCCC AGGCGAAAGCCGTTT uvrC 1280170 - 1282002 + | excinuclease ABC, C subunit TERM 1659 1282159 - 1282170 + G 71 -4.4 -4.67943 | overlap 1282147 1282145 CCTGGGCGCCGATGG TCAG CGCG CTGA TTTTCTGTATTGCCG pgsA 1282059 - 1282607 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1660 1282801 - 1282785 - f 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 1661 1282889 - 1282874 - f 73 -7.6 -4.07885 | GATGCTGGCTGAAAA GCCAAA AAAA TTTGGC GCGTTAACAAAGCGG TERM 1662 1283017 - 1282997 - f 72 -10.5 -2.89742 | overlap 1283000 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG GCGTTCGCGCTGTGC TERM 1663 1283103 - 1283116 + F 100 -8.1 -5.66684 | opp_overlap 1283103 AGCAGTGTCGTGAAA CCACC TACG GGTGG TTTTTTTGTGCCTTC TERM 1664 1284141 - 1284151 + G 76 -3.2 -5.0916 | AGTGAAGCGCACTCG CCGT GGA ATGG TTTTTATATTACCGC TERM 1665 1285023 - 1285010 - g 72 -2.3 -4.87665 | opp_overlap 1285010 TCTTAGTCATAAAAA TCCCC AAAT GCGGA TCGATTATCTCACCA SeD_A1304 1283859 - 1285292 + | putative cell wall-associated hydrolase SeD_A1305 1285505 - 1285831 + | putative glucose-6-phosphate dehydrogenase SeD_A1306 1286070 - 1286735 + | YecA family protein TERM 1666 1286762 - 1286798 + T 100 -18.1 -3.66874 | CGGCCATAGCGTGAT GATTATCGAGCCTGGAC GGC GTCCGGGCCCGGTAATC TTTGCCTGACATTAA SeD_A1307 1288078 - 1286810 - | tyrosine-specific transport protein TERM 1667 1286901 - 1286882 - G 85 -11.4 -4.03978 | AATGCCGCAGATAAA CACCAGCG CCAG CGCTGGCG TGCCGCCTGCCACAC TERM 1668 1287060 - 1287050 - G 71 -8.2 -3.786 | overlap 1287051 GTAGAAAAGCGCAAA CGCC AGC GGCG GCAGAAAGGTAATCA TERM 1669 1288353 - 1288338 - g 75 -6 -4.63932 | GAGGCGGCAATAAAA GCGCGC TTTG GCGAGC GGGCACGATTTCACA TERM 1670 1288438 - 1288450 + G 71 -4.8 -4.57569 | AAGGAAAGTTTATTG CCGT GGAGG ACGG TTTTTCAACGCATGA SeD_A1308 1288248 - 1288487 + | hypothetical protein ftnA 1289030 - 1288533 - | ferritin-1 SeD_A1310 1289245 - 1289129 - | hypothetical protein TERM 1671 1289212 - 1289193 - G 100 -10 -5.3167 | TAAAAATAAAGAAAA GCCAGCAC CTTC ATGCTGGC AATAGCGACCCTGCG TERM 1672 1289285 - 1289264 - R 73 -10.9 -2.52464 | opp_overlap 1289246 1289263 GTCGGCGTTAAGCCA GCCGCCTTA ATAA TAAAGCGGC ATAATTTGCGGGACT SeD_A1311 1289605 - 1289270 - | putative outer membrane lipoprotein TERM 1673 1289751 - 1289775 + H 72 -8.1 -3.68506 | GTGAGCGTCTCTTCA TTTAATGAAAC TTC GTTTTATTAAA TTTGAATGCATGTTC SeD_A1312 1289861 - 1290499 + | ribose/galactose isomerase SeD_A1313 1291181 - 1290678 - | ferritin, Dps family protein TERM 1674 1291905 - 1291918 + G 72 -3.7 -4.7373 | opp_overlap 1291906, overlap 1291906 CAGCACGCTGAGTGA ACGCC AGCA GGCGC TTTTTGATGCGGTAG SeD_A1314 1291732 - 1292289 + | ThiJ/PfpI domain protein TERM 1675 1292794 - 1292828 + F 100 -14.4 -3.91897 | gap 1, overlap 1292795 1292796 ACAGTATAGCTTCAC G-TCATCGCCAGCCG CTACCC CGGCTGGCGATGGTC TTTCTAAATGGCGAG TERM 1676 1292795 - 1292826 + F 100 -18.1 -3.5511 | overlap 1292794 1292796 CAGTATAGCTTCACG TCATCGCCAGCCG CTACCC CGGCTGGCGATGG TCTTTCTAAATGGCG TERM 1677 1292796 - 1292825 + F 100 -19.4 -2.72745 | overlap 1292795 1292794 AGTATAGCTTCACGT CATCGCCAGCCG CTACCC CGGCTGGCGATG GTCTTTCTAAATGGC TERM 1678 1293487 - 1293501 + GF 82 -7.1 -4.82901 | AGGAGGCGCCCTTTG CGGGA CGGAT TCCCG TTTTTGTGGGCGACG otsB 1292922 - 1293725 + | trehalose-phosphatase TERM 1679 1293771 - 1293751 - g 81 -8.1 -4.30719 | opp_overlap 1293756 1293758 1293758, overlap 1293753 CCCCCGGATAATAAA GGCGGCGCC GGC GGCCTCGCC GTTGGCGTGCTTGGC TERM 1680 1293756 - 1293778 + G 83 -14.8 -2.71364 | opp_overlap 1293751 1293753, overlap 1293758 1293758 GGATAATAAAGGCGG CGCCGGCGGC CTC GCCGTTGGCG TGCTTGGCGCGCTAA TERM 1681 1295020 - 1295033 + G 72 -3.8 -4.71828 | opp_overlap 1295020 AAAAATGACATTAAC CGCT GGCAGG AGCG TTTTATTCATGACCT otsA 1293700 - 1295121 + | alpha,alpha-trehalose-phosphate synthase SeD_A1317 1295567 - 1295139 - | universal stress protein C TERM 1682 1296070 - 1296089 + G 73 -5.8 -4.4009 | opp_overlap 1296070 AGTATTCCGTTAAAT TATGTGGT CTAC ATCACATA TTTTCTAAAATCGCC SeD_A1318 1295998 - 1296141 + | hypothetical protein SeD_A1319 1296354 - 1296704 + | transcriptional activator FlhD flhC 1296707 - 1297285 + | flagellar transcriptional activator FlhC TERM 1683 1297312 - 1297335 + F 100 -15.4 -5.86332 | opp_overlap 1297308 1297307 TGGACAAACACTCCA GCAGCGGTAA GTCA TTACCGCTGC TTTTTTTTGCCTTGC motA 1297410 - 1298297 + | chemotaxis protein MotA TERM 1684 1298357 - 1298330 - g 70 -6.9 -4.07687 | gap 1, overlap 1298345 1298346 ATTGTCGTCGTAAAA CGCCGCAG-GCA CAAAC CGCACGGCGGCG GGGCGCACGGTTCCT TERM 1685 1298355 - 1298345 - g 71 -8.2 -3.91897 | overlap 1298330 1298346 CGCCGCAGGCACAAA CCGC ACG GCGG CGGGGCGCACGGTTC TERM 1686 1298796 - 1298784 - g 70 -6.9 -4.11216 | overlap 1298785 GCCCGATGTTTAAAA CCGGC AGC GCCGA AGTTGAGCCGTATAT motB 1298294 - 1299223 + | chemotaxis protein MotB TERM 1687 1299969 - 1299955 - g 70 -3.4 -4.6821 | opp_overlap 1299964, overlap 1299959 AAGCGCAAGAGAAAA CCGAGG TAG CGCCGG TAGCGCCTCCGGCAG TERM 1688 1300463 - 1300452 - g 83 -7.2 -4.60924 | GAAATGCCGGAAAAA CGCC TTGA GGCG GGGAAAAATGTTGTC SeD_A1323 1299234 - 1301243 + | chemotaxis protein CheA TERM 1689 1301721 - 1301711 - g 70 -3.2 -4.74706 | GTGAATATCGAAAAA CTGC TTA ACAG CGAAGAGATGGCGCT SeD_A1324 1301264 - 1301767 + | purine binding chemotaxis protein TERM 1690 1301803 - 1301771 - T 88 -12.7 -3.61715 | opp_overlap 1301763 1301773 1301797, overlap 1301772 CACGTCGCGTAATAA CGTTGCCGGATGGCG TTG CGCCATTCGGCAATA TTCACCGTTATGCTT TERM 1691 1301802 - 1301772 - T 84 -14 -2.76815 | opp_overlap 1301763 1301773 1301797, overlap 1301771 ACGTCGCGTAATAAC GTTGCCGGATGGCG TTG CGCCATTCGGCAAT ATTCACCGTTATGCT TERM 1692 1301773 - 1301801 + T 100 -19.7 -3.07233 | opp_overlap 1301772 1301771, overlap 1301763 1301797 CGTCGCGTAATAACG TTGCCGGATGGCG TTG CGCCATTCGGCAA TATTCACCGTTATGC TERM 1693 1301847 - 1301826 - T 71 -9.5 -3.14564 | gap 1, opp_overlap 1301797, overlap 1301804 TTATGCTTCCACCAA CGGTG-AGAG TGC CTCTTCACCG CCCGCGCCCAGCCCC SeD_A1325 1301924 - 1301811 - | hypothetical protein TERM 1694 1303097 - 1303079 - g 95 -5.2 -5.42862 | opp_overlap 1303080, overlap 1303080 ACAGTTCGAAAAAAA TCGCTGAC ATT ATCAGCGT TATCGACGGTATTGC TERM 1695 1303096 - 1303080 - g 73 -8.7 -3.84633 | opp_overlap 1303080, overlap 1303079 CAGTTCGAAAAAAAT CGCTGAC ATT ATCAGCG TTATCGACGGTATTG SeD_A1326 1302004 - 1303665 + | methyl-accepting chemotaxis protein II TERM 1696 1303891 - 1303877 - g 71 -11.4 -2.88999 | opp_overlap 1303878 1303879, overlap 1303879 TTGTTACAGATGACA CAGCGC CTC GCGCTG TCCGACGCGCATTTT TERM 1697 1304373 - 1304349 - g 74 -7.1 -4.28774 | opp_overlap 1304349 TCAGCGAACTGAAAA CGTTATCGCCG CAG CAGCTACAACG TTACTTCATGCGCGG cheR 1303826 - 1304692 + | chemotaxis protein methyltransferase CheR cheB 1304689 - 1305738 + | chemotaxis response regulator protein-glutamate methylesterase CheB cheY 1305756 - 1306145 + | chemotaxis response regulator CheY SeD_A1330 1306156 - 1306800 + | chemotaxis protein CheZ TERM 1698 1306853 - 1306884 + F 82 -13.1 -3.10493 | overlap 1306834 GAATCCGTCAACCCG GCCGGATACGAGA CTTTCT TATCGTATCCGGC TATCTCTATTAACGC TERM 1699 1307391 - 1307380 - g 71 -7.2 -4.06055 | ATTTTCTAAATTAAA CCCG CTGC CGGG AATTAAGCGCATGTT TERM 1700 1308094 - 1308114 + G 74 -6.8 -4.36914 | opp_overlap 1308092 ACAACCTGAGAACCT TCCGGTGC CAGAA GCGCTGGA TTTTATGAACGAGAA flhB 1306994 - 1308145 + | flagellar biosynthetic protein FlhB TERM 1701 1309051 - 1309073 + G 74 -2.7 -4.93696 | overlap 1309053 GGCTGCTTGGCATGG TGCCAGG AATGCCTAA CCTGGTA TTTTTACTCTTTACC TERM 1702 1309149 - 1309137 - g 80 -4.7 -5.06414 | GGGCGCGAAGAAAAA GCGCC AGA GGAGC CGCAGCCGGTAAAAA TERM 1703 1309728 - 1309744 + G 76 -10.9 -3.6608 | GATCTGGTCCCCGGC GTCGTGA CCC TCACGAC TTTACATAAAGTCCT flhA 1308138 - 1310216 + | flagellar biosynthesis protein FlhA SeD_A1333 1310216 - 1310608 + | flagellar protein FlhE SeD_A1334 1310742 - 1310605 - | hypothetical protein SeD_A1335 1310844 - 1311983 + | glycosyl hydrolase, family 88 SeD_A1336 1313908 - 1312037 - | penicillin-binding protein 2 TERM 1704 1312114 - 1312139 + g 86 -10.3 -4.09685 | TTCGCATGATGGGCG CGGCGGTAACG CCGT CGCTTCCGCCG TTTTCCAGAATCAAG TERM 1705 1312594 - 1312576 - G 71 -7.5 -4.04206 | opp_overlap 1312575 1312584 1312585 CGATGCCGACAGAAA TGGTATC GCCCT GATACCA GGCTTTTTTATGGAC TERM 1706 1312584 - 1312597 + g 78 -2.3 -5.24129 | opp_overlap 1312576, overlap 1312575 1312585 ACAGAAATGGTATCG CCCTG ATAC CAGGC TTTTTTATGGACCCG TERM 1707 1312766 - 1312751 - G 74 -3.2 -4.9792 | GACCTGATAGAAAAA GGTATC CGCA GATTCC TCAATCGCTTTAGTG TERM 1708 1314073 - 1314045 - R 100 -14.6 -5.06414 | opp_overlap 1314042 1314039 CTGTGGCAATAAAAA GGCCTGAGTCCG TTATC CGGAGTCAGGCC TGATGATGTTAACGA argS 1315830 - 1314097 - | arginyl-tRNA synthetase TERM 1709 1315870 - 1315853 - R 71 -9.8 -3.15544 | opp_overlap 1315849 1315848 CCTTACGTTTATGAA GCGGGC TGTATT GCCCGC GCCAGTTTAAGAATT SeD_A1338 1315962 - 1315846 - | hypothetical protein SeD_A1339 1316067 - 1316636 + | protein YecM TERM 1710 1316744 - 1316779 + G 100 -17.7 -3.02144 | opp_overlap 1316715 1316734 1316752, overlap 1316756 TCGAACTGTGCGCCG CGCCGAAAGAAGGGG GGCTTA CGCCTTCTTTCGGCG TCTTACGCAGCGTAC TERM 1711 1316832 - 1316846 + G 86 -7.8 -4.7373 | ACATCCGATTATTCG TCCTCG CGG CGGGGA TTTTTACTACACTGA TERM 1712 1317006 - 1316984 - g 71 -4.6 -4.67173 | overlap 1316985 GAATGGAAAAAATAA TGGCGGCGGC CGG GCCGCTGGCG GTGACATTCCACCGC TERM 1713 1317119 - 1317109 - g 90 -8.2 -4.83169 | ACTTCCGGACAAAAA GCCG ATG CGGC GCAAGGTTTATCAAT SeD_A1340 1316656 - 1317402 + | copper homeostasis protein CutC TERM 1714 1317450 - 1317474 + T 100 -10 -5.71983 | TGCTTGCTCGTACCA GGCCCCTG CCAATTCAA CAGGGGCC TTTTTTTCTCCTTCA TERM 1715 1317525 - 1317558 + T 86 -10.9 -3.794 | overlap 1317526 TTGGCCGCCTCGCGC ACCCCGGTCACGTAG CTAC CTACGTTCCCGGGGA TTTGCTGCGTTGCCG TERM 1716 1317526 - 1317557 + T 87 -14.4 -2.87319 | overlap 1317525 TGGCCGCCTCGCGCA CCCCGGTCACGTAG CTAC CTACGTTCCCGGGG ATTTGCTGCGTTGCC SeD_A1341 1318609 - 1317638 - | putative methyltransferase SeD_A1342 1319349 - 1318606 - | putative methyltransferase TERM 1717 1318684 - 1318704 + g 74 -6.7 -4.27886 | opp_overlap 1318685, overlap 1318685 TTCACTGTGTTCGAA ACCCGCCTG ACG CAGGCGCGC TTTATGTGTTTCCAC TERM 1718 1318703 - 1318685 - G 74 -10.2 -3.53444 | opp_overlap 1318685 1318684 TCACTGTGTTCGAAA CCCGCCTG ACG CAGGCGCG CTTTATGTGTTTCCA TERM 1719 1319391 - 1319375 - R 71 -3.6 -4.85782 | overlap 1319376 TCCGGGAAAAATAAA GGCGCA TATTG TGCGCT AATACAGGGAGAAAA SeD_A1343 1319785 - 1319390 - | putative inner membrane protein TERM 1720 1319702 - 1319679 - G 88 -11 -4.11484 | gap 1, opp_overlap 1319676 TGCAATTCGCTAAAA CCGCCGTCGCC ATA GGCGACA-CGG TACTGCATTCGCAAG SeD_A1344 1320656 - 1319838 - | hypothetical protein TERM 1721 1319994 - 1319971 - G 74 -2.2 -4.98672 | opp_overlap 1319982, overlap 1319972 TGTAAAAACAGAAAA GGCGTGGTGG TCTG CCGCCACTGC GGGAGTTTCTGCAAC TERM 1722 1320493 - 1320481 - G 80 -4.8 -5.01042 | opp_overlap 1320481 AATTTAAAGCAAAAA CGGA AATCG TCCG TAGTTTGCGCATACC SeD_A1345 1321219 - 1320653 - | isochorismatase family protein aspS 1321544 - 1323316 + | aspartyl-tRNA synthetase nudB 1323419 - 1323871 + | dATP pyrophosphohydrolase TERM 1723 1323861 - 1323881 + F 79 -3.2 -5.40474 | gap 1, opp_overlap 1323862, overlap 1323862 AAGAGTTTGTCATTA ACGTCGCCT GAAA AGGCG-CGC TTTTTTTGAGGAAAT SeD_A1348 1323901 - 1324641 + | conserved hypothetical protein TIGR01033 ruvC 1324678 - 1325199 + | crossover junction endodeoxyribonuclease RuvC TERM 1724 1326161 - 1326142 - g 74 -4.8 -4.72272 | opp_overlap 1326142 1326114, overlap 1326143 TCCGCCGAGCAAAAA GCCAGCGC GAGG GCGCAGGG CGTTGATTTACACTT SeD_A1350 1325230 - 1326726 + | putative periplasmic phosphate-binding protein SeD_A1351 1327422 - 1326826 - | putative periplasmic protein SeD_A1352 1327631 - 1328323 + | hypothetical protein TERM 1725 1328614 - 1328629 + F 79 -7.6 -4.47611 | ATACGTGTTTTTCAT CTGGAT AAAC ATCCAG TCTTTTTTTATGATA ruvA 1328683 - 1329294 + | holliday junction DNA helicase RuvA ruvB 1329303 - 1330313 + | holliday junction DNA helicase RuvB znuB 1331177 - 1330392 - | zinc uptake ABC transporter, permease protein ZnuB TERM 1726 1330911 - 1330899 - G 80 -10.5 -3.82202 | CAGTCCTAAAGATAA GGCGC TGT GCGCC ATAATGCCCAGTAAG znuC 1331980 - 1331174 - | high-affinity zinc uptake ABC transporter, ATP-binding protein ZnuC TERM 1727 1331555 - 1331569 + g 73 -5.6 -4.65895 | CAGTACGCGCTGTGT CTCACC GCC GGAGAG TTTTTGCATGGGCGC TERM 1728 1332425 - 1332410 - g 76 -5.4 -4.77036 | GCCGATGAGGAAAAA GGTGAC GTAC ATCACC ATCACGGCGAATATA znuA 1332008 - 1332952 + | zinc ABC transporter, periplasmic zinc-binding protein SeD_A1358 1332968 - 1334287 + | metalloprotease, opacity-associated protein A family TERM 1729 1334304 - 1334326 + F 100 -13.4 -5.8901 | opp_overlap 1334293 1334304 AAATGCGCTGACAGA GCCGGTACGC GAT GTGTGCCGGC TTTTTTGTTTTGTGT msbB 1334404 - 1335375 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 1730 1335402 - 1335377 - T 100 -14.9 -4.49958 | opp_overlap 1335381, overlap 1335381 ATCCCATCAAATAAA TAAAGCCTCTC GTAA GAGAGGCTTTA TGCTGACAAACCCTG TERM 1731 1335381 - 1335398 + T 87 -11.3 -3.96148 | opp_overlap 1335377 1335381 CATCAAATAAATAAA GCCTCTC GTAA GAGAGGC TTTATGCTGACAAAC TERM 1732 1335398 - 1335381 - T 100 -11.3 -4.80736 | opp_overlap 1335381, overlap 1335377 CATCAAATAAATAAA GCCTCTC GTAA GAGAGGC TTTATGCTGACAAAC pykA 1336890 - 1335448 - | pyruvate kinase II TERM 1733 1336800 - 1336834 + g 71 -12.2 -2.52543 | opp_overlap 1336812, overlap 1336792 1336809 1336812 GTACGACGTTTGCGC CCGCGGCGATAACCTT CTC AAGGTTGTTATCGCGG TCAGTTGCCGGGCCT SeD_A1361 1337883 - 1337014 - | HTH-type transcriptional regulator HexR zwf 1338225 - 1339700 + | glucose-6-phosphate 1-dehydrogenase TERM 1734 1339780 - 1339805 + TF 89 -5.4 -5.80364 | gap 1 TTTTTGCACTTTTAA GCCTCGTGTGG ATTCA CC-TGCGAGGC TTTTTTTATTACACT SeD_A1364 1339969 - 1339814 - | hypothetical protein TERM 1735 1340758 - 1340731 - gH 73 -10.6 -3.06796 | overlap 1340733 CCGCACGTCAGGTAA CACGTCTTACCG GCAA CGGCAATACGTG GATGCCGCTCGGTAA edd 1339935 - 1341746 + | phosphogluconate dehydratase eda 1341784 - 1342425 + | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 1736 1342531 - 1342494 - T 80 -6.4 -4.83615 | gap 2, opp_overlap 1342496 1342497, overlap 1342495 1342496 CAGGTCTGATAAAAA TGCGCTAACGTCGCCATC AGGC GATGGCG-CATTAGC-CT TTTACCGTCACGCGG TERM 1737 1342530 - 1342495 - T 75 -9.9 -3.49687 | gap 2, opp_overlap 1342496 1342497, overlap 1342494 1342496 AGGTCTGATAAAAAT GCGCTAACGTCGCCATC AGGC GATGGCG-CATTAGC-C TTTTACCGTCACGCG TERM 1738 1342496 - 1342530 + T 73 -7.9 -4.13767 | gap 1, opp_overlap 1342495 1342494 1342496, overlap 1342497 GGTCTGATAAAAATG CGCTAACGTCGCCATC AGGC GATGGCG-CATTAGCC TTTTACCGTCACGCG TERM 1739 1342497 - 1342529 + T 75 -11.4 -3.08046 | gap 1, opp_overlap 1342495 1342496 1342494, overlap 1342496 GTCTGATAAAAATGC GCTAACGTCGCCATC AGGC GATGGCG-CATTAGC CTTTTACCGTCACGC TERM 1740 1342545 - 1342555 + T 73 -4.6 -4.76312 | overlap 1342536 CTTTTACCGTCACGC GGCT GGC GGCC TTTTTCGCTCTTATC purT 1343703 - 1342525 - | phosphoribosylglycinamide formyltransferase 2 SeD_A1367 1343834 - 1344124 + | DNA damage-inducible protein TERM 1741 1344399 - 1344383 - g 91 -3.6 -5.56568 | AGACGACCAAAAAAA GGTCGG GCAGG CTGACC CGGTCGCGTGGGTTA SeD_A1368 1344192 - 1344545 + | protein YebF SeD_A1369 1344639 - 1345298 + | inner membrane protein YebE SeD_A1370 1345511 - 1347562 + | protease 2 TERM 1742 1347572 - 1347598 + T 74 -8.7 -3.89291 | gap 1, opp_overlap 1347564, overlap 1347573 GCATAGACGCGCGCG CCCGCAACGGCT TGTG AGC-GTCGCGGG TTATTGTGGTGTTCC SeD_A1371 1348297 - 1347599 - | exodeoxyribonuclease 10 SeD_A1372 1348977 - 1348321 - | hydrolase, carbon-nitrogen family SeD_A1373 1349315 - 1349085 - | hypothetical protein SeD_A1374 1349453 - 1349827 + | copper resistance protein CopC SeD_A1375 1349828 - 1350703 + | copper resistance protein D SeD_A1376 1350720 - 1351073 + | hypothetical protein TERM 1743 1351119 - 1351092 - T 100 -11.4 -5.45652 | opp_overlap 1351092 ATTTTTAATAAAAAA CCGTAAACCTTC ACGA AAAGGCTTACGG TTTTTTTATCTCTGA TERM 1744 1351092 - 1351119 + T 100 -8.5 -5.76633 | opp_overlap 1351092 ATTTTTAATAAAAAA CCGTAAACCTT CACGAA AAGGCTTACGG TTTTTTTATCTCTGA TERM 1745 1351282 - 1351311 + T 93 -7.3 -5.74684 | gap 1, overlap 1351283 AAGAGCCATTTCCCT G-GACCGAATAC AGGAATC GTATTCGGTCTC TTTTTATTTTTCTTA TERM 1746 1351283 - 1351309 + T 95 -11 -4.45545 | overlap 1351282 AGAGCCATTTCCCTG GACCGAATAC AGGAATC GTATTCGGTC TCTTTTTATTTTTCT SeD_A1379 1352535 - 1351456 - | phage integrase TERM 1747 1351542 - 1351561 + g 72 -3.5 -4.83169 | CCAGGAGTTTTTGGG CGAACAC CTCGCC GTGCTCG TTTTTGTACAGCCGT TERM 1748 1351666 - 1351699 + g 76 -5.1 -4.81685 | overlap 1351668 TACAAATGTCTTTGT CAGCCCATCCGGG TGAATATT CCCGGTCGGGCTA TTTTTCCTGATTCCT TERM 1749 1351668 - 1351697 + g 71 -7.7 -4.02049 | overlap 1351666 CAAATGTCTTTGTCA GCCCATCCGGG TGAATATT CCCGGTCGGGC TATTTTTCCTGATTC TERM 1750 1352029 - 1352047 + g 71 -4.4 -4.61231 | overlap 1352022 1352021 CTTAATCTCTGGTAT CCGGGTTG CTT CCACCGGG TTTTTCACAATATGC SeD_A1380 1353085 - 1352849 - | hypothetical protein SeD_A1381 1353561 - 1353376 - | hypothetical protein SeD_A1382 1354438 - 1353608 - | protein RecT TERM 1751 1354289 - 1354312 + g 80 -8.8 -4.12603 | gap 1, overlap 1354290 GCGTTCCGCTGTCAT GTGGCGG-GGC AGG GCCGCCGCCAG TTGTTCTTTCATGGA TERM 1752 1354290 - 1354311 + g 76 -12.3 -3.06839 | gap 1, overlap 1354289 CGTTCCGCTGTCATG TGGCGG-GGC AGG GCCGCCGCCA GTTGTTCTTTCATGG SeD_A1383 1357121 - 1354431 - | exodeoxyribonuclease 8 TERM 1753 1355117 - 1355130 + g 71 -4.5 -4.56597 | overlap 1355111 TCTTTGTTTTCTCCG TGTCC ACGG GGGCA TTTTTACGCCACAGA TERM 1754 1355495 - 1355519 + g 72 -4.1 -4.72272 | overlap 1355502 CTGCGTTTCTGGTGA CAGCCTCCGGC TCT GCTGCTGGTTG TTTTTCCTCCGGCAC TERM 1755 1356126 - 1356136 + g 70 -5.4 -4.4572 | GGGAATAATGCCCAC TGTC ATC GACA TTTGTTTCCAGTCTT TERM 1756 1357054 - 1357039 - G 95 -6.8 -5.34555 | opp_overlap 1357050, overlap 1357040 1357050 GTATACCAGAAAAAA CCGGCT TTAA AGCCGA GGCGTTTCCTGGCAC TERM 1757 1357053 - 1357040 - G 71 -8.1 -3.79649 | opp_overlap 1357050, overlap 1357039 1357050 TATACCAGAAAAAAC CGGCT TTAA AGCCG AGGCGTTTCCTGGCA TERM 1758 1357254 - 1357272 + r 100 -13.2 -5.37593 | opp_overlap 1357243, overlap 1357243 TAAAGCCGGGGAAGC GCCTGCAT TTA ATGCAGGC TTTTTTCCTTTGAGG SeD_A1384 1357597 - 1357262 - | LygB SeD_A1385 1357879 - 1357673 - | prophage Kil protein SeD_A1386 1358158 - 1357883 - | hypothetical protein TERM 1759 1359139 - 1359154 + r 74 -10.4 -3.14132 | opp_overlap 1359139 GATAAGCAAAAAAAA TCCCGC ATTT GCGGGA TTACTAAGAGGGGAG TERM 1760 1359154 - 1359139 - R 100 -10.4 -5.98781 | opp_overlap 1359139 GATAAGCAAAAAAAA TCCCGC ATTT GCGGGA TTACTAAGAGGGGAG SeD_A1387 1359373 - 1359176 - | putative regulator TERM 1761 1360291 - 1360274 - g 84 -3.3 -5.41143 | CAGCTTTTAAAAAAA CCGCAGT GGCA AGCGCGG TACTTCTTGGCGCGC SeD_A1388 1359914 - 1360408 + | hypothetical protein TERM 1762 1361209 - 1361178 - g 82 -5.2 -5.07486 | gap 1 CAGTGGGAACAAAAA TTCGCCCGTCACGTA AAC CACGTCA-GGGCAAA GGCGAAACCAGCCAG SeD_A1389 1360455 - 1361453 + | hypothetical protein SeD_A1390 1361485 - 1361907 + | replication P family protein SeD_A1391 1363663 - 1362602 - | diguanylate cyclase TERM 1763 1362692 - 1362670 - G 71 -9.8 -3.61398 | overlap 1362671 CCGCTCTGGCAATAA TGCCGGTAAC AGT GTCACCGGCT GTGGAAAGGGTGATG TERM 1764 1362691 - 1362671 - G 79 -13.3 -2.76696 | overlap 1362670 CGCTCTGGCAATAAT GCCGGTAAC AGT GTCACCGGC TGTGGAAAGGGTGAT TERM 1765 1362736 - 1362762 + g 71 -9.5 -3.54935 | gap 1, overlap 1362757 TGACCGTTTCGCTAA CCGCAGATGCTG CATG CGGCAT-TGCGG TTTCACGCAGGTTTG TERM 1766 1363321 - 1363309 - G 73 -6.2 -4.3767 | GCAGATGATAATAAA GCGC AGCCA GCGC GGTAAGCATAAGGAT TERM 1767 1363401 - 1363385 - G 100 -5.1 -5.60689 | overlap 1363388 CCAGACAATAAAAAA GTAGCTA CAA TAGCTCC ACATCAGACTGAGAA TERM 1768 1363539 - 1363495 - G 90 -4.4 -5.30155 | opp_overlap 1363503, overlap 1363498 1363501 TCAGGAACGAAAAAA CAATAATACTGCCCATAATA TCGTC TATTAAAGGCAGTATTCCAG TCTGTGCACTGATCG TERM 1769 1363536 - 1363498 - G 81 -6.9 -4.72473 | opp_overlap 1363503, overlap 1363495 1363501 GGAACGAAAAAACAA TAATACTGCCCATAATA TCGTC TATTAAAGGCAGTATTC CAGTCTGTGCACTGA TERM 1770 1363533 - 1363501 - G 83 -8.6 -4.42047 | opp_overlap 1363503, overlap 1363498 1363495 ACGAAAAAACAATAA TACTGCCCATAATA TCGTC TATTAAAGGCAGTA TTCCAGTCTGTGCAC TERM 1771 1365684 - 1365708 + G 75 -12.1 -2.90723 | GTAACTTCTACCTGA CCGGTGCGCAG GAG CTGCGTAACGG TGTGGTTAAAGGTCC SeD_A1392 1364141 - 1366108 + | alkyl/aryl-sulfatase BDS1 TERM 1772 1366113 - 1366142 + T 77 -10.7 -3.34192 | opp_overlap 1366110 1366114, overlap 1366114 TTACACCATAAATAG ATTCCCTGCGGCG TCAA TGCTGCAGGGAAG TTACTTCAGACAATT TERM 1773 1366114 - 1366141 + T 83 -14.2 -2.60194 | opp_overlap 1366114 1366110, overlap 1366113 TACACCATAAATAGA TTCCCTGCGGCG TCAA TGCTGCAGGGAA GTTACTTCAGACAAT TERM 1774 1366141 - 1366114 - T 79 -11.3 -3.37299 | opp_overlap 1366113 1366114, overlap 1366110 TACACCATAAATAGA TTCCCTGCGGC GTCAAT GCTGCAGGGAA GTTACTTCAGACAAT SeD_A1393 1366390 - 1366265 - | hypothetical protein TERM 1775 1366354 - 1366397 + g 72 -11.2 -3.08508 | gap 1, overlap 1366356 ATGCTTTTCGATGCC GGTTGGCCATGATGCCAGT ATGGTTA ACTGGCATCATGG-CAGCA TAATTTTGCCGGATA TERM 1776 1366616 - 1366627 + H 85 -3.6 -5.58454 | ACCCGCACTTAATAC CTGC GCCG GCGG TTTTTTTAATGTCCG SeD_A1394 1366827 - 1367045 + | hypothetical protein TERM 1777 1367090 - 1367116 + F 72 -9.4 -3.58343 | opp_overlap 1367089 GAACTCCCAATCTAC TGCGCCAACG GAGAGAA CGATGGCGCA TTTACAACTGGTCAA TERM 1778 1367221 - 1367200 - g 74 -4.3 -4.72272 | opp_overlap 1367200 TGCGCTCAGTAAAAA TCGGTGAGT GGAT ACACGCCGA TTTTAAACGTGTCCG TERM 1779 1367200 - 1367221 + G 70 -6.5 -4.13014 | opp_overlap 1367200 TGCGCTCAGTAAAAA TCGGTGAGT GGAT ACACGCCGA TTTTAAACGTGTCCG SeD_A1395 1367109 - 1367708 + | IrsA SeD_A1396 1367705 - 1367932 + | gifsy-1 prophage NinG TERM 1780 1368331 - 1368341 + G 83 -8.2 -4.42386 | CTCCACTTCCTCATG GCGC CGT GCGC TTTTGTCACTCGAAG SeD_A1397 1368062 - 1368709 + | gifsy-1 prophage RegQ SeD_A1398 1368806 - 1369330 + | hypothetical protein TERM 1781 1369434 - 1369448 + F 89 -4.9 -5.7946 | CTTATTTACATCTTC CTGGC TTTTC GCCGG TTTTTTTATTCAGCC SeD_A1399 1369591 - 1369707 + | hypothetical protein TERM 1782 1370321 - 1370289 - T 100 -22.3 -3.14132 | opp_overlap 1370289 1370293, overlap 1370293 TGTGTTCTTTATGAA TAAATATCCTCCGGC TAT GCCGGAGGATATTTA TTATTTCCCCTCATA TERM 1783 1370289 - 1370321 + T 100 -22.3 -3.94634 | opp_overlap 1370289 1370293, overlap 1370293 TGTGTTCTTTATGAA TAAATATCCTCCGGC TAT GCCGGAGGATATTTA TTATTTCCCCTCATA TERM 1784 1370293 - 1370317 + T 100 -18.7 -4.57581 | opp_overlap 1370289 1370293, overlap 1370289 TTCTTTATGAATAAA TATCCTCCGGC TAT GCCGGAGGATA TTTATTATTTCCCCT TERM 1785 1370317 - 1370293 - T 100 -18.7 -4.24342 | opp_overlap 1370293 1370289, overlap 1370289 TTCTTTATGAATAAA TATCCTCCGGC TAT GCCGGAGGATA TTTATTATTTCCCCT SeD_A1400 1370987 - 1370514 - | GtgA SeD_A1401 1371470 - 1371805 + | phage holin, lambda family SeD_A1402 1371792 - 1372241 + | phage lysozyme SeD_A1403 1372238 - 1372738 + | bacteriophage lysis protein SeD_A1404 1372946 - 1373479 + | gifsy-2 prophage protein TERM 1786 1375537 - 1375549 + GF 71 -10.5 -2.70932 | opp_overlap 1375516 AGAAAAAAATTTTAC CCGCC TGG GGCGG TGGTTCCGGAGGAGG SeD_A1405 1373433 - 1375574 + | phage terminase large subunit SeD_A1406 1375571 - 1375777 + | hypothetical protein TERM 1787 1376491 - 1376468 - gf 86 -14.6 -2.65354 | gap 1, opp_overlap 1376469, overlap 1376465 1376464 TGCATCTTAAATTCA CCCGTCGCCTG AAT CAGGCG-CGGG GCGTCACGCTGCTGG TERM 1788 1376563 - 1376582 + GF 74 -7.1 -4.2243 | gap 1, overlap 1376577 GACAGTGAAAGGCTG GCCGCGCG TATTT CG-GCGGC TTTTGCCATGTTTAT TERM 1789 1377292 - 1377273 - g 72 -3.5 -4.82901 | overlap 1377258 1377255 TGGCGGCGATAAAAA TGCCGCC GGTGAT GACAGCA GGGAACGGACGCGGG SeD_A1407 1375774 - 1377321 + | phage portal protein, lambda family SeD_A1408 1377272 - 1379326 + | ATP-dependent protease TERM 1790 1379356 - 1379367 + F 93 -7.2 -5.64274 | ACATTAAGCGATACG GCCC TGAC GGGC TTTTTTTATACCTGA TERM 1791 1379403 - 1379385 - f 95 -14.6 -3.63627 | TTTTTATACCTGAAA TCCGGCAC GGC GTGCCGGA AAGGAGAATAACCGT SeD_A1409 1379417 - 1379740 + | putative RecA/RadA recombinase SeD_A1410 1379733 - 1380032 + | hypothetical protein SeD_A1411 1380013 - 1380579 + | prophage minor tail protein Z SeD_A1412 1380576 - 1380977 + | phage minor tail protein U SeD_A1413 1380989 - 1381738 + | gifsy-2 prophage VmtV SeD_A1414 1381784 - 1382182 + | phage minor tail protein G SeD_A1415 1382245 - 1382508 + | phage tail assembly protein T TERM 1792 1384453 - 1384425 - g 74 -2.4 -5.1101 | gap 1, opp_overlap 1384425 CCACGACCGAAAAAA TGACGGAAGC-GC ATAA GCAGCTTTTGTCA TTTCAGCAGCGCATC SeD_A1416 1382489 - 1385575 + | gifsy-1 prophage VmtH SeD_A1417 1385572 - 1385904 + | phage minor tail protein SeD_A1418 1386003 - 1386500 + | attachment/invasion protein TERM 1793 1386553 - 1386570 + T 100 -8.4 -5.28176 | opp_overlap 1386552 CGATACAGATTTAAT GCCCTC CAGTGA GAGGGC TTTTTTATGGGTAAA sodC 1387150 - 1386617 - | copper/zinc superoxide dismutase TERM 1794 1387295 - 1387282 - g 71 -8.1 -3.82218 | opp_overlap 1387274 1387291 AGCGAGACCACCAAA GCGGA GCAG TCCGC GAAGGTGGATTTGTG TERM 1795 1387864 - 1387852 - g 77 -7.7 -4.2687 | CCGAAAAAGGATAAA TGCAG CCA CTGCA TGAAAGGCTGTGAAA TERM 1796 1387890 - 1387905 + G 70 -3.2 -4.75174 | overlap 1387881 TGAAATGCGTAACAA TCTGGT GAAT GCCGGA TTTTTCGCTTCCATC SeD_A1420 1387240 - 1387935 + | phage minor tail protein L SeD_A1421 1387945 - 1388676 + | tail assembly protein TERM 1797 1389035 - 1389025 - g 70 -6.8 -4.18494 | overlap 1389027 CACCTGTACCCAAAA CACC GAC GGTG GGTCAGACAGATAAC SeD_A1422 1388784 - 1389284 + | bacteriophage lambda tail assembly protein I TERM 1798 1389316 - 1389330 + F 91 -8.5 -5.05116 | opp_overlap 1389316 1389313 1389311 AGCTGATACACATGA CCGCC ATTAC GGCGG TTTTGTTATTTATGG TERM 1799 1391144 - 1391132 - f 71 -7.7 -3.90048 | CGTTCCGGAAAAAGA GTCCA TCG TGGAC AACGGGGCGCACTTT TERM 1800 1392451 - 1392437 - f 79 -8.6 -4.26589 | ATCAGATAGGGAAAA CCATCA CGG TGATGG CTAACTGTGAGCGTA TERM 1801 1392775 - 1392795 + G 100 -9 -5.09259 | gap 1, overlap 1392769 1392776 GCGTAATTTCTCTGG CGG-CAGGG CTTT CCCTGTCCG TTTTATTTTCCACTG SeD_A1426 1392747 - 1392989 + | hypothetical protein TERM 1802 1393008 - 1393025 + F 81 -4.7 -5.24129 | opp_overlap 1393003 GTGAATGAATCTGAA GCCTGGC TGCG GGCGGGC TTTTTTATGGAGGCA TERM 1803 1393434 - 1393379 - g 89 -13.8 -3.62597 | GCGATGGTGGAAGAA GTTGCCCGCCAGGCATCGGAGGCATC GCGG AATGCCACCGCCGCAGGGCAGGCATC TGAACAGGCGCAGAC TERM 1804 1393605 - 1393580 - g 73 -5.9 -4.4648 | overlap 1393592 ACGGCGACTACAAAA GCCGGGAAGGC ATCA GCCAGCGCGGC GTCGGCTGACACAGC TERM 1805 1393652 - 1393626 - g 95 -15 -3.41125 | overlap 1393619 CTGACACAGCCAGAA CGGCGGCAGCCG CAT CGGCAGCCGCAG CGAAAACATCTGAAG TERM 1806 1393870 - 1393846 - g 95 -12.7 -4.09864 | overlap 1393847 AGCCACGTCGGAAAA GGCGGCAGCCG CAT CGGCAGCCGCA GCGAAAACATCTGAG TERM 1807 1393869 - 1393847 - g 100 -16.2 -3.05597 | overlap 1393846 GCCACGTCGGAAAAG GCGGCAGCCG CAT CGGCAGCCGC AGCGAAAACATCTGA SeD_A1427 1393043 - 1395460 + | side tail fiber protein TERM 1808 1395871 - 1395860 - g 75 -5.8 -4.67942 | CGGAAGAAACCAAAA GCAG GCTC CTGC AAATGGCATCTGAAA SeD_A1428 1395460 - 1396029 + | phage tail assembly protein TERM 1809 1396049 - 1396093 + T 100 -13.9 -4.35742 | opp_overlap 1396058 AAAAATATAGCTATG TAGTAGAGATTGCTGCTATAT GTT ATATAGCAGCAATGGCTATTA TTTTGATGGTTGAGT TERM 1810 1396084 - 1396058 - T 93 -15.4 -2.95298 | opp_overlap 1396049 GCTATGTAGTAGAGA TTGCTGCTATAT GTT ATATAGCAGCAA TGGCTATTATTTTGA SeD_A1429 1396953 - 1396231 - | guanine nucleotide exchange factor SopE SeD_A1431 1398233 - 1397433 - | hypothetical protein TERM 1811 1397852 - 1397876 + g 70 -3 -4.68384 | gap 1, opp_overlap 1397857, overlap 1397858 CTAAAATTAGCGACA TATCAGCACAG TTCC CTGTGTT-ATA TTTTATTGAATCAAT TERM 1812 1397858 - 1397871 + g 70 -6.7 -4.0865 | opp_overlap 1397857, overlap 1397852 TTAGCGACATATCAG CACAG TTCC CTGTG TTATATTTTATTGAA TERM 1813 1398465 - 1398441 - R 87 -10.7 -4.15565 | GTTAGGATGTGAAAA CACAGGGACAG TTA CTGTCACTGCG AAGGCAGCAATAAGG SeD_A1432 1400266 - 1399187 - | integrase TERM 1814 1399273 - 1399292 + g 72 -3.5 -4.83169 | CCAGGAGTTTTTGGG CGAACAC CTCGCC GTGCTCG TTTTTGTACAGCCGT TERM 1815 1399397 - 1399430 + g 76 -5.1 -4.81685 | overlap 1399399 TACAAATGTCTTTGT CAGCCCATCCGGG TGAATATT CCCGGTCGGGCTA TTTTTCCTGATTCCT TERM 1816 1399399 - 1399428 + g 71 -7.7 -4.02049 | overlap 1399397 CAAATGTCTTTGTCA GCCCATCCGGG TGAATATT CCCGGTCGGGC TATTTTTCCTGATTC TERM 1817 1399760 - 1399778 + g 71 -4.4 -4.61231 | overlap 1399753 1399752 CTTAATCTCTGGTAT CCGGGTTG CTT CCACCGGG TTTTTCACAATATGC SeD_A1433 1401210 - 1400263 - | exodeoxyribonuclease 8 TERM 1818 1400526 - 1400539 + g 71 -4.5 -4.56597 | overlap 1400520 ACTTTGTTTTCTCCG TGTCC ACGG GGGCA TTTTTGCGCCAAAGA TERM 1819 1400904 - 1400928 + g 72 -4.1 -4.72272 | overlap 1400911 CCGCGTTTCTGGTGA CAGCCTCCGGC TCT GCTGCTGGTTG TTTTTCCTCCGGCAC TERM 1820 1401530 - 1401556 + G 75 -3.6 -4.87665 | opp_overlap 1401511, overlap 1401545 AGCTTGAGCTAGAAC GTCATGCCGC CCGATCC GCAGCGTGGC TTTTTGTGACTAAAG SeD_A1434 1401400 - 1401687 + | lytic enzyme SeD_A1435 1401684 - 1402217 + | protein gp55 TERM 1821 1402231 - 1402202 - T 71 -7.9 -3.99985 | opp_overlap 1402202 GAGAGAGTCAAATAA TTACAGGAGGCAT TGAA ACTCCCCCTGTAA TATTGCTGTAAAAAA SeD_A1436 1402321 - 1402202 - | hypothetical protein SeD_A1437 1402641 - 1402474 - | hypothetical protein SeD_A1438 1402897 - 1402706 - | hypothetical protein SeD_A1439 1402952 - 1403215 + | gifsy-2 prophage protein TERM 1822 1404041 - 1404025 - f 86 -13.7 -3.29096 | TGGATGAATGATGAA GCTGCGG AGG CCGCAGC CAGACTTCGTGAAGC TERM 1823 1404270 - 1404304 + F 75 -10.9 -2.95476 | overlap 1404272 TTTGTCAGGAAAGCT CAGGCCTTATTTATA GCAAA TATGAAGAAGGCCTG TCTGTCATAACTGAT SeD_A1442 1404982 - 1405152 + | hypothetical protein SeD_A1443 1405119 - 1405244 + | arsenical pump membrane protein TERM 1824 1405722 - 1405756 + T 93 -11.7 -3.67976 | gap 1, opp_overlap 1405726 TTAAACTATCGTAAT GGAACAAAGAGTTACT TTAA AG-AGCTCTTTGTTCC TTTAACCTTGATGAA SeD_A1444 1405904 - 1405758 - | hypothetical protein TERM 1825 1406416 - 1406426 + r 71 -6.8 -4.07568 | opp_overlap 1406406, overlap 1406408 GAGAACTGCCCTCGT CAGG AGG CCTG TTTTCAGAAAGGCAA SeD_A1445 1407006 - 1406392 - | putative inner membrane protein TERM 1826 1406847 - 1406836 - G 86 -3.6 -5.28942 | GAGGTTAAATAAAAA GCCA AAAC CGGC GATGATGAGGCCAGC SeD_A1446 1407174 - 1407016 - | hypothetical protein SeD_A1447 1408744 - 1408616 - | hypothetical protein TERM 1827 1408963 - 1409020 + r 73 -11.5 -2.59051 | gap 1, opp_overlap 1408934, overlap 1408963 TATGCAAGAACGGGC TGCGGCAAGCTGGCGATCGTTCGATAGT GCG AGTATTGAATGGTTGCCAG-TTGCGGCG GATTTTACTTGTTCA TERM 1828 1410478 - 1410468 - R 79 -8.2 -4.24204 | CACTGAGAGGCAAAA CCGG CAA CCGG ATGCGCTGTACCCCA TERM 1829 1411145 - 1411161 + r 76 -5.1 -4.78839 | CCGATCCAGAACTGG CGGCT GGCGGTG AGCCG TTTTATTATCGAGTT TERM 1830 1411178 - 1411199 + r 79 -10.1 -3.76224 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATAACTGGGCA SeD_A1451 1411749 - 1411603 - | hypothetical protein SeD_A1452 1411972 - 1412166 + | hypothetical protein SeD_A1453 1412277 - 1412714 + | putative acetyltransferase SeD_A1454 1413563 - 1413087 - | hypothetical protein TERM 1831 1413565 - 1413576 + r 79 -4.4 -5.15969 | TCATCCTTGCTCATA CATC TCCA GATG TTTTTTCGATTACGC TERM 1832 1413722 - 1413738 + r 74 -10.9 -2.80074 | opp_overlap 1413720, overlap 1413718 GCTTTGAATATCATT TCTCCTG CAC CAGGAGA TGCTGTTGTCGAGCA TERM 1833 1413937 - 1413955 + r 81 -3.8 -5.41359 | opp_overlap 1413928, overlap 1413928 1413938 AATAATTGGTTGTCT TTCGACCA TTA TTGTCGAG TTTTTTGGTTTAATT TERM 1834 1414446 - 1414456 + r 76 -2.4 -5.41143 | TGTTACTGATTATTT CTCG TAG CGCG TTTTTTTGACCACTA SeD_A1456 1414689 - 1414558 - | hypothetical protein TERM 1835 1415461 - 1415446 - g 84 -3.2 -5.36441 | TGGGGAGATAAAAAA TGGCGT ATTT ACTCCA GGTGGGGCAGGGGCG SeD_A1457 1414970 - 1415692 + | guanine nucleotide exchange factor SopE TERM 1836 1415765 - 1415796 + F 80 -6.6 -4.75288 | overlap 1415767 CTATATATTCGTTTT TATGGCGACGCTTT TAAC AAAACGTCGTCATC TTTATTTTAATATAA TERM 1837 1415767 - 1415794 + G 76 -9.2 -3.98052 | overlap 1415765 ATATATTCGTTTTTA TGGCGACGCTTT TAAC AAAACGTCGTCA TCTTTATTTTAATAT SeD_A1458 1415766 - 1415891 + | hypothetical protein SeD_A1459 1415977 - 1416141 + | putative inner membrane protein TERM 1838 1416177 - 1416226 + G 100 -19.4 -4.66318 | opp_overlap 1416167, overlap 1416179 1416182 GAACAGGCGATAGTG AGTAGCTCGCTGCGCCAGGGGA TAACCC TCCCCTGGCGCAGCCAGTTATA TTTTATTGCGATGAT TERM 1839 1416179 - 1416224 + G 100 -24.2 -3.94438 | opp_overlap 1416167, overlap 1416177 1416182 ACAGGCGATAGTGAG TAGCTCGCTGCGCCAGGGGA TAACCC TCCCCTGGCGCAGCCAGTTA TATTTTATTGCGATG TERM 1840 1416182 - 1416221 + G 100 -23.7 -4.0865 | opp_overlap 1416167, overlap 1416179 1416177 GGCGATAGTGAGTAG CTCGCTGCGCCAGGGGA TAACCC TCCCCTGGCGCAGCCAG TTATATTTTATTGCG SeD_A1460 1416174 - 1416347 + | hypothetical protein TERM 1841 1416701 - 1416716 + G 76 -3.2 -5.06735 | overlap 1416697 ACCGCTGAACACGCT GCGC AAGCTGAA GCGC TTTTTATCCTTTGTC TERM 1842 1416915 - 1416942 + G 70 -6.9 -4.08767 | overlap 1416916 ATCATTTTTGGTTTG GCCATACGCCG TTGCGC CGGCGCATGGA TTTTGCCAACGTACA SeD_A1461 1416365 - 1417015 + | serine/threonine-protein phosphatase 1 SeD_A1462 1417168 - 1417034 - | hypothetical protein TERM 1843 1417327 - 1417306 - R 78 -6.5 -4.55759 | opp_overlap 1417306 1417309, overlap 1417309 AAAAGGAAGAATAAA TAACCCGCC TGGC GACGGGTTC TTTTTGAGTCAGGCA TERM 1844 1417309 - 1417324 + r 72 -6 -4.44608 | opp_overlap 1417306 1417309, overlap 1417306 AGGAAGAATAAATAA CCCGCC TGGC GACGGG TTCTTTTTGAGTCAG TERM 1845 1417324 - 1417309 - R 79 -8.2 -4.34486 | opp_overlap 1417309 1417306, overlap 1417306 AGGAAGAATAAATAA CCCGCC TGGC GACGGG TTCTTTTTGAGTCAG SeD_A1463 1417575 - 1417336 - | hypothetical protein TERM 1846 1417476 - 1417466 - G 70 -6.8 -4.128 | opp_overlap 1417466, overlap 1417462 AGTTGCATACATAAA TCCG GAT CGGA TTTACAGGGGATTGT TERM 1847 1417558 - 1417547 - G 74 -7.2 -4.13767 | opp_overlap 1417550 TCGTCGATTTCAAAA GCGC CAAT GCGC ACACTGGTTTTCATC SeD_A1464 1417718 - 1417587 - | hypothetical protein SeD_A1465 1419129 - 1417690 - | ribosomal RNA small subunit methyltransferase F TERM 1848 1418005 - 1417994 - GR 75 -5.8 -4.58395 | CCGAGCCGGGAAAAA CGGA CTTT TCCG ATCAGTGATTCAATT TERM 1849 1418484 - 1418494 + gr 86 -6.8 -5.02074 | TATCCAGATTGCTTT CTGG CGA CCAG TTTTTTAGCGCATCA TERM 1850 1419200 - 1419175 - R 100 -12.5 -4.46926 | opp_overlap 1419174 1419173 1419191, overlap 1419156 1419176 CAGTGTAGCATAAAA CGCTCCGGCGC GAGT ACGCCGGAGCC GGGTGTTTAACGTGG TERM 1851 1419199 - 1419176 - R 100 -16 -3.27674 | opp_overlap 1419174 1419173 1419191, overlap 1419156 1419175 AGTGTAGCATAAAAC GCTCCGGCGC GAGT ACGCCGGAGC CGGGTGTTTAACGTG SeD_A1466 1421840 - 1419207 - | mce-related protein TERM 1852 1420380 - 1420350 - GR 74 -11.1 -2.79796 | overlap 1420352 TTCCAGGTTAGCATA GAGCGGGTAGGTG GATTT CATCTTCCCGCTC GTACCGGGTAAAATA TERM 1853 1421524 - 1421466 - GR 71 -9.5 -3.14211 | opp_overlap 1421466 1421470, overlap 1421483 1421520 1421521 ATTCCCGCCGACCAA CGC-ATCCAGGCCGGAAACGCCCGCCAGC GAG GCTTT-GGGCGTCACCAGCCAGAATTGCG TCTCTTCGCGCAACG SeD_A1467 1423092 - 1421809 - | integral membrane protein, PqiA family TERM 1854 1422157 - 1422144 - GH 75 -3.7 -4.83615 | opp_overlap 1422147, overlap 1422147 TACTGGCGATAAAAA CGACG GCGG CGACG GCGATATTGCTGCTG SeD_A1468 1423221 - 1423718 + | GAF domain protein TERM 1855 1423746 - 1423765 + F 81 -12.2 -3.15996 | overlap 1423744 GTAGCAATTACTGAT GGCGTCAT TATA ATGACGCC TGTTCATGCCTGCTG TERM 1856 1424193 - 1424179 - g 85 -4.9 -5.17576 | CAGCAAGCGAAAAAA CGCGA AGCTG CCGCG GCGGCTGGCGAAAAA TERM 1857 1424254 - 1424212 - g 85 -9 -4.40561 | overlap 1424209 GCTGGCGAAAAAGAA GACGCGCCGCGACGCGAG CGTAAAC CTCGCCCGGTAGCGCGTC GTAAAGAAGGCGCTG TERM 1858 1424308 - 1424341 + G 74 -7.3 -4.1043 | gap 1, opp_overlap 1424297 1424294 1424306 1424305, overlap 1424308 CCGACGACGAAAGCG CCG-CGTGCGCCTCGC GAA GAGAAGCACACGCCGG TTTCTGATATTTCAG proQ 1423816 - 1424502 + | ProP effector TERM 1859 1424553 - 1424578 + G 83 -14.8 -2.72344 | GGCTTACCGCGTTAG CTGGCCTGCT TGCATT AGCAGGCCAG TCCTTCGCCGTGGAA TERM 1860 1424873 - 1424890 + G 74 -10.5 -3.60792 | opp_overlap 1424872 1424873 TACGATCTTTATAAC CTGGCGC AAAA GCGCCGG TTTGAACGTTACCAG TERM 1861 1426391 - 1426379 - g 73 -9.1 -3.91564 | opp_overlap 1426386 GAGAACAATGAAGAA GACGC TCT GCGTC TGGCGCGTATTAACG TERM 1862 1426553 - 1426541 - g 93 -4.7 -5.61881 | CTTGAAAAAGAAAAA CCAGC GGA GCAGG CGGCAGCCAATAAGT prc 1424522 - 1426570 + | tail-specific protease TERM 1863 1426599 - 1426578 - f 95 -13.1 -3.69836 | opp_overlap 1426578, overlap 1426592 ATAAGTAACGCTAAA CAGGCACAA AAAA TTGTGCCTG TTTTTTTTAACAAGC TERM 1864 1426578 - 1426599 + F 100 -13.1 -5.75342 | opp_overlap 1426578 1426592 ATAAGTAACGCTAAA CAGGCACAA AAAA TTGTGCCTG TTTTTTTTAACAAGC TERM 1865 1427213 - 1427184 - g 70 -8.7 -3.73224 | gap 1, opp_overlap 1427193 TCATTGCGCATGAAA TCAGCCATATTGCC AAT GGCGATATGG-TGA CGATGACGTTGATTC SeD_A1471 1426763 - 1427644 + | M48B family peptidase TERM 1866 1427686 - 1427669 - f 95 -12.7 -4.3534 | opp_overlap 1427669 TGGCAAGTATGAAAA GCGCGTC GAAT GACGCGC TTTTTTTACGCCTGA TERM 1867 1427669 - 1427686 + F 100 -12.7 -5.42259 | opp_overlap 1427669 TGGCAAGTATGAAAA GCGCGTC GAAT GACGCGC TTTTTTTACGCCTGA TERM 1868 1428590 - 1428579 - f 72 -5.8 -4.45485 | overlap 1428580 ATGAGATGGACAAAA TCGC TGCG GCGA TCGTCGGACCCGCGG TERM 1869 1429037 - 1429055 + F 73 -2.2 -5.09895 | overlap 1429036 1429039 TATCTCTGCGGGAGG GGCAGGCC ATC GGCCCGTG TTTTTTCCATAAGTA TERM 1870 1429039 - 1429053 + F 71 -7 -4.17608 | overlap 1429036 1429037 TCTCTGCGGGAGGGG CAGGCC ATC GGCCCG TGTTTTTTCCATAAG SeD_A1473 1429241 - 1430032 + | transcriptional regulator KdgR TERM 1871 1430063 - 1430085 + T 100 -9.9 -5.626 | opp_overlap 1430063 TGACGTTAAAAAAAA GCAGCTACG AAAAA TGTAGCTGC TTTTTTTATAACATC TERM 1872 1430085 - 1430063 - T 100 -9.2 -5.78622 | opp_overlap 1430063 TGACGTTAAAAAAAA GCAGCTAC GAAAAAT GTAGCTGC TTTTTTTATAACATC SeD_A1474 1430483 - 1430244 - | hypothetical protein SeD_A1475 1430641 - 1430784 + | hypothetical protein TERM 1873 1431084 - 1431068 - g 77 -3.5 -5.00765 | overlap 1431071 AACGAACCAGAAAAA GAAGCGG AAC CCGCAAC AGCGGCAAGAGAACC TERM 1874 1431081 - 1431071 - g 87 -8.2 -4.58563 | overlap 1431068 GAACCAGAAAAAGAA GCGG AAC CCGC AACAGCGGCAAGAGA SeD_A1476 1430855 - 1431142 + | hypothetical protein TERM 1875 1431421 - 1431437 + G 79 -2.9 -5.26907 | overlap 1431429 AGAACATCACAAAAA GCGGTGT CGA AAATCGC TTTTCTTTTCTATTA TERM 1876 1431429 - 1431442 + G 75 -3.9 -4.88288 | overlap 1431421 ACAAAAAGCGGTGTC GAAAA TCGC TTTTC TTTTCTATTATTTTG SeD_A1477 1431368 - 1431484 + | hypothetical protein TERM 1877 1432092 - 1432074 - g 70 -6.7 -4.09739 | overlap 1432075 GCAATGGTTTCAAAA CTCTGGC TGAAG GCCAGAA CGTTGAGTTCGAAAT cspC 1431947 - 1432156 + | cold shock protein CspC TERM 1878 1432133 - 1432149 + F 70 -9.5 -2.94099 | overlap 1432113 CAGAAAGGTCCGGCT GCTGTTA ACG TAACAGC TATCTGATCGACACC TERM 1879 1432205 - 1432223 + F 100 -12.4 -4.89009 | opp_overlap 1432205 AGCCTCAGATATAAA GCCTCGCT AAA AGCGGGGC TTTTTAATTCAATAT TERM 1880 1432223 - 1432205 - f 87 -10.2 -4.128 | opp_overlap 1432205 AGCCTCAGATATAAA GCCTCGCT AAA AGCGGGGC TTTTTAATTCAATAT TERM 1881 1432290 - 1432306 + F 85 -3.7 -5.47914 | TTTGTTGCAAAGGCG CGATGTT ATT AGCATTG TTTTTTCTGGTTTTT TERM 1882 1432441 - 1432462 + G 71 -7.3 -3.9461 | TGCACTACTTTGCAC TGCCATTCT GCTC AGTATGGCA TTGTTGTTAGGGCGG TERM 1883 1432704 - 1432675 - g 71 -10.7 -3.28712 | gap 1, opp_overlap 1432683, overlap 1432676 1432678 CGGCGTTGGCTACAA TGAGCGCTGG-CAG GCG CTGGCCAGCGCCCT GCATCTGTCGCTCAG TERM 1884 1432703 - 1432676 - g 81 -14.2 -2.57132 | gap 1, opp_overlap 1432683, overlap 1432675 1432678 GGCGTTGGCTACAAT GAGCGCTGG-CAG GCG CTGGCCAGCGCCC TGCATCTGTCGCTCA TERM 1885 1432701 - 1432678 - g 79 -13.2 -2.82623 | gap 1, opp_overlap 1432683, overlap 1432676 1432675 CGTTGGCTACAATGA GCGCTGG-CAG GCG CTGGCCAGCGC CCTGCATCTGTCGCT SeD_A1479 1432376 - 1434121 + | peptidoglycan synthetase FtsI SeD_A1480 1434187 - 1434996 + | ribosomal RNA large subunit methyltransferase A TERM 1886 1435006 - 1435029 + T 70 -10.4 -2.5655 | gap 1, opp_overlap 1435006 1435007, overlap 1435005 CGTTAACCGTGAAAA T-GCGTCCAGA GGA TCTGGACGCCA ATTCCTATCAGTACG TERM 1887 1435028 - 1435006 - T 95 -12 -4.14392 | opp_overlap 1435006 1435005, overlap 1435007 CGTTAACCGTGAAAA TGCGTCCAGA GGA TCTGGACGCC AATTCCTATCAGTAC TERM 1888 1435027 - 1435007 - T 93 -15.5 -3.08314 | opp_overlap 1435006 1435005, overlap 1435006 GTTAACCGTGAAAAT GCGTCCAGA GGA TCTGGACGC CAATTCCTATCAGTA SeD_A1481 1435559 - 1434993 - | membrane protein YebN TERM 1889 1435826 - 1435852 + r 79 -8.2 -4.258 | AAATATTATTTGCCT TCTAATTGAAAA CGA TTTTCATTTAGA TTTATTCATCAATAA TERM 1890 1435918 - 1435903 - R 78 -6.2 -4.66537 | opp_overlap 1435903 TTGGTCAATAGAAAA TATAGC CTTA GCTATA TTATGATTCGAAATA SeD_A1483 1436427 - 1435969 - | hypothetical protein TERM 1891 1436451 - 1436470 + r 71 -10.6 -2.62184 | opp_overlap 1436452 CAGAGAAATAAAAAA ACGGGGCC GTTT GGCCCCGG TAGTGTACAACAGCC TERM 1892 1436469 - 1436452 - R 100 -14.1 -6.04953 | opp_overlap 1436451 AGAGAAATAAAAAAA CGGGGCC GTTT GGCCCCG GTAGTGTACAACAGC manZ 1437337 - 1436486 - | PTS system, mannose-specific IID component TERM 1893 1436915 - 1436891 - G 72 -4.1 -4.81734 | opp_overlap 1436893, overlap 1436905 AAACAGGATGAAAAA CAGCAGCGGAC CAA GCAGGCTGCCG CTCATTGCAATACCT TERM 1894 1437291 - 1437301 + g 79 -3.2 -5.28778 | overlap 1437288 ACGCCGCGAATATCG CTCG GAG TGAG TTTTTTCTCGGTGGT manY 1438150 - 1437350 - | PTS system, mannose-specific IIC component manX 1439171 - 1438203 - | PTS system, mannose-specific IIAB component TERM 1895 1438286 - 1438296 + g 78 -6.8 -4.59853 | overlap 1438274 1438295 CAAGCTCGATGCCGC GCTC GTT GAGC TTTTTAAAGGCTTCG TERM 1896 1438735 - 1438763 + g 100 -9.4 -4.86033 | overlap 1438737 GGCGTGGCCGCTTTT GGCGCGGCGGCG ACTGG CGCTGGCGCGGC TTTTTCTACCGGTTT SeD_A1487 1439644 - 1441203 + | protein YegH SeD_A1489 1442607 - 1441225 - | cyclic diguanylate phosphodiesterase (EAL) domain protein TERM 1897 1441253 - 1441305 + gF 81 -12.5 -3.09635 | opp_overlap 1441232 1441252, overlap 1441242 ATCGCGGACATAATC TGTCCGTTATGCCGGGCGGGCGGCG GCG CGCTGCCCGCCAGCCACTGTGGAAA TTCGCTAATGGGCAT TERM 1898 1442168 - 1442193 + gF 89 -2.7 -5.63103 | gap 1 AAAGGGAAATGTCGC GATGAA-AGC TGGTAAC GCTCTTCATC TTTTTTTAATTCCGG SeD_A1488 1442578 - 1442706 + | hypothetical protein TERM 1899 1442947 - 1442919 - TR 100 -13.9 -5.10968 | overlap 1442920 AGGAAGAGATAAAAA TTTCGCCCATCCG TAG CAGATGGGCGAAG GGAGGGGAAACGGCG TERM 1900 1442946 - 1442920 - TR 100 -17.4 -3.64954 | overlap 1442919 GGAAGAGATAAAAAT TTCGCCCATCCG TAG CAGATGGGCGAA GGGAGGGGAAACGGC SeD_A1490 1444328 - 1442964 - | L-serine ammonia-lyase TERM 1901 1444099 - 1444075 - G 89 -9.3 -4.63486 | overlap 1444094 ACGTCGCGAATAAAA CCGGGGATACT ATC AATATCCACGG TAGCGGGTTCATTAC SeD_A1491 1445170 - 1444592 - | hydrolase, nudix family TERM 1902 1444972 - 1444997 + g 70 -9.7 -3.35046 | gap 1, overlap 1444970 TACTGTCCACGGCCC CGCCGGGAAAGG CGA CCTGT-CCGGCG TGTTTGCGCAAATGA pabB 1446538 - 1445174 - | aminodeoxychorismate synthase, component I TERM 1903 1446742 - 1446776 + G 74 -7.2 -4.11216 | gap 2 GTGGCGGGCGAACTT CGCGCCAACCATACCG GCGAA CGG-ATAGT-GGCGCG TTTTGAGGATGAAGA SeD_A1493 1446619 - 1446798 + | hypothetical protein SeD_A1494 1447148 - 1446804 - | endoribonuclease L-PSP family protein TERM 1904 1447854 - 1447876 + G 80 -4.8 -5.07486 | overlap 1447855 GGCGATGGACGCGGA TGTGGTGATT GTA AACCACCACC TTTTTCTTGCGGATA SeD_A1495 1447279 - 1449189 + | hypothetical protein TERM 1905 1449387 - 1449426 + G 89 -13.6 -3.53811 | gap 1 GCAGGAGATTCTGGC CGCCAGCGGCGTCTCGCTC AAT GAGATAGATGC-GCTGGCG TTTGGGCGCGGTCCG SeD_A1496 1449247 - 1449942 + | glycoprotease family protein slp 1450014 - 1450595 + | outer membrane protein Slp TERM 1906 1450617 - 1450641 + F 86 -14.4 -2.56596 | opp_overlap 1450617 1450621, overlap 1450621 GTTTTATCAATAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCATAGAGAC TERM 1907 1450641 - 1450617 - f 100 -14.4 -4.71426 | opp_overlap 1450617 1450621, overlap 1450621 GTTTTATCAATAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCATAGAGAC TERM 1908 1450637 - 1450621 - f 93 -9.4 -4.90302 | opp_overlap 1450617 1450621, overlap 1450617 TATCAATAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCATAG TERM 1909 1450621 - 1450637 + F 77 -9.4 -3.98826 | opp_overlap 1450621 1450617, overlap 1450617 TATCAATAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCATAG SeD_A1498 1450800 - 1452485 + | long-chain-fatty-acid--CoA ligase TERM 1910 1452509 - 1452525 + F 100 -11.5 -5.75342 | opp_overlap 1452509 TCAGCTAACGAGAGA CGCCGGT TAA GCCGGCG TTTTTTTTGGCGCGA TERM 1911 1452525 - 1452509 - f 73 -10.8 -3.0127 | opp_overlap 1452509 TCAGCTAACGAGAGA CGCCGG TTAAG CCGGCG TTTTTTTTGGCGCGA TERM 1912 1452626 - 1452580 - g 83 -12.4 -3.74626 | gap 2, opp_overlap 1452579 1452578 1452576 ACCAAATGATTGAAA CGGACGATGCGCTGGCGAGCCT GTGTG AGGCTGTCC-GCGCAT-GTCCG GCTATTGCTTTAGAT rnd 1452558 - 1453685 + | ribonuclease D TERM 1913 1453780 - 1453751 - T 100 -15.3 -5.57054 | opp_overlap 1453758, overlap 1453758 AATAATGTAAAAAAA TAAAAAAGGCAGA TTCT TCTGCCTTTTTTA ATCCAGGAATTTTCC TERM 1914 1453758 - 1453773 + T 100 -9 -5.14563 | opp_overlap 1453751 1453758 TAAAAAAATAAAAAA GGCAGA TTCT TCTGCC TTTTTTAATCCAGGA TERM 1915 1453773 - 1453758 - T 100 -9 -6.12458 | opp_overlap 1453758, overlap 1453751 TAAAAAAATAAAAAA GGCAGA TTCT TCTGCC TTTTTTAATCCAGGA minE 1454073 - 1453807 - | cell division topological specificity factor MinE TERM 1916 1453852 - 1453869 + g 76 -5.5 -4.72986 | opp_overlap 1453854 TACGTTAAGTTCAAG GATGGAG ATAT CACCATC TTTTTGCTCAAGCTG minD 1454889 - 1454077 - | septum site-determining protein MinD TERM 1917 1454558 - 1454538 - G 74 -10.5 -3.57144 | opp_overlap 1454537 1454538 CCGGCGAGTCGCAAA CGATGAACT CAA AGTCCATCG CTTTCAGTGAGTCCA TERM 1918 1454592 - 1454605 + g 71 -9.5 -3.5241 | overlap 1454593 CCTTAGCGACGCCTT CGCGC GTTA GCGCG TCTTTATCCCGGGTC minC 1455620 - 1454913 - | septum site-determining protein MinC TERM 1919 1455511 - 1455498 - GH 87 -8.1 -4.56597 | opp_overlap 1455497 1455495 1455498 GGCGTGTTTTAAAAA CGCAG GAGC CTGCG CTATTTTGTCTTCTA SeD_A1504 1455605 - 1456039 + | protein YcgL TERM 1920 1456438 - 1456427 - g 77 -3.6 -5.10154 | AGGGAAAATGAAAAA GGCC GGAC AGCC CTGGGAAAAAGCCAA SeD_A1505 1456089 - 1456748 + | fumarylacetoacetate hydrolase domain-containing protein 1 SeD_A1506 1456826 - 1457287 + | protein YcgN SeD_A1507 1457639 - 1457776 + | hypothetical protein TERM 1921 1457809 - 1457825 + T 100 -10.1 -5.17054 | opp_overlap 1457797 CAACCGCCTGATGCA CCGTCTG TGC CAGGCGG TTTTTTACATCTTCT SeD_A1508 1457955 - 1457839 - | hypothetical protein SeD_A1509 1457968 - 1458141 + | hypothetical protein SeD_A1510 1458554 - 1458213 - | tellurite resistance protein TehB TERM 1922 1458641 - 1458656 + r 73 -10.4 -2.98823 | opp_overlap 1458641 TTCGGGCAAAAAAAA CGCTCC CGAA GGAGCG TGTGTATCAACGACC TERM 1923 1458656 - 1458641 - R 100 -10.4 -5.75342 | opp_overlap 1458641 TTCGGGCAAAAAAAA CGCTCC CGAA GGAGCG TGTGTATCAACGACC SeD_A1511 1459193 - 1458663 - | oxido-reductase nhaB 1460879 - 1459335 - | Na+/H+ antiporter NhaB TERM 1924 1460549 - 1460538 - G 72 -2.2 -4.86385 | overlap 1460540 ACGGGTAAAAATAAA CAGC AATA ACTG CTTCATAAAGTAGAT TERM 1925 1460863 - 1460844 - G 89 -9.2 -4.57569 | CGACTGGCCTAAAAA GTTGCGCC ACAT GGCGCGAC CCCATGAGATCTCCA fadR 1461099 - 1461818 + | fatty acid metabolism transcriptional regulator FadR SeD_A1514 1463397 - 1461865 - | SpoVR family protein TERM 1926 1462630 - 1462648 + g 75 -3.7 -4.87665 | AATTTCGCGCTGCCA CGGCTCG AGCAA CGGGGCG TTTTTCTCCATAAAA TERM 1927 1463483 - 1463473 - H 72 -3.2 -5.06451 | CACCATGTTAAAAAA CGAC TTG ATCG TGAAAACTTTTCTTT TERM 1928 1463928 - 1463918 - g 70 -5.4 -4.42788 | CTGAAGGCGATAAAA TGGA TGT TCCA GCGCCATGCGCCGCT TERM 1929 1464050 - 1464035 - g 76 -5.4 -4.70515 | gap 1, overlap 1464036 1464037 TATATGGAAAATAAA GGCCGCA TGG TGCG-CC TGGCGGAATATAGTC SeD_A1515 1463720 - 1465018 + | D-amino acid dehydrogenase small subunit alr 1465032 - 1466102 + | alanine racemase SeD_A1517 1467898 - 1466165 - | cell volume regulation protein A TERM 1930 1466883 - 1466860 - G 76 -9.6 -3.81022 | gap 1 AAACGGCGAGAATAA TCGGCACCGCG CCG CGCAGT-CCGA CCCAACTGATGAAAA TERM 1931 1467230 - 1467199 - G 74 -2.2 -4.98531 | gap 1, overlap 1467205 1467207 TCGTCAAAGCAAAAA TCAGAATACCGCCGC TGA GCGCCAGCAT-CGGA TACAAGCCGCTGGGC TERM 1932 1467416 - 1467403 - G 75 -3.7 -4.8543 | opp_overlap 1467403 1467409 TAATGGTCAGAAAAA CGGCC ATCG GGTCG TTACTTCCCGATTCG SeD_A1518 1468909 - 1467995 - | muramoyltetrapeptide carboxypeptidase TERM 1933 1468786 - 1468776 - G 70 -6.8 -4.11216 | overlap 1468784 TCCGTACCGGCAAAA CGCT GAA AGCG GCGACGAATCACCTC TERM 1934 1468844 - 1468858 + g 75 -12.8 -2.55896 | opp_overlap 1468798, overlap 1468843 1468841 AGTCAGGCGCTGAAC GCCGCG TAA CGCGGC CTGTTGGTTAATACA TERM 1935 1469225 - 1469215 - R 84 -8.2 -4.68593 | CCCATCAGTGAAAAA GCCG GGG CGGC ATGGGGGGTTGATCC SeD_A1520 1470439 - 1469705 - | YcgR family protein SeD_A1521 1470608 - 1470862 + | transglycosylase-associated protein TERM 1936 1470882 - 1470909 + T 76 -12 -2.62184 | opp_overlap 1470875 TGCAGAACGTGTAAG CGTTGACCCGGT CAGC GCCGGGTCAACC TACTATAAACACGCG TERM 1937 1470934 - 1470947 + T 78 -5.9 -4.8543 | CACGCGTTACTGCGT CGCTG CAGA CGGCG TTTTTGTCGGCGTTG SeD_A1522 1472637 - 1470925 - | trehalase TERM 1938 1471544 - 1471577 + g 75 -6.5 -4.3898 | overlap 1471546 TGCGAGGCTTTGGCC CGATCGCCCGCCGCA GCGC TGGCGCGGGCGAGGG TTTTCTCCAGCTGAT SeD_A1523 1472717 - 1472833 + | hypothetical protein TERM 1939 1472810 - 1472827 + T 71 -7 -4.08767 | opp_overlap 1472810 GATACAGACAAAAAA TCCACG CCGGGA CGTGGA TTTTAGCGCAATAAC TERM 1940 1472827 - 1472810 - T 95 -7.7 -5.4492 | opp_overlap 1472810 GATACAGACAAAAAA TCCACGC CGGG ACGTGGA TTTTAGCGCAATAAC SeD_A1524 1474125 - 1472851 - | glutamate dehydrogenase TERM 1941 1473539 - 1473525 - G 70 -2.7 -4.82901 | opp_overlap 1473525 1473526 GCCCGCTGACAAAAA CGCCG CGCCC CGTCG CTTTTTCACGGCCCA TERM 1942 1474513 - 1474482 - R 85 -6.5 -5.24799 | opp_overlap 1474485, overlap 1474485 GTATAAAGATAAAAA TAACCGGAGTCAG ACGGCG CTGGCCCCGGTTT ACCTCTTTATTGTTG TERM 1943 1474485 - 1474510 + r 74 -8.2 -3.84931 | opp_overlap 1474482 1474485 TAAAGATAAAAATAA CCGGAGTCAG ACGGCG CTGGCCCCGG TTTACCTCTTTATTG TERM 1944 1474510 - 1474485 - R 84 -8.2 -4.67478 | opp_overlap 1474485, overlap 1474482 TAAAGATAAAAATAA CCGGAGTCAG ACGGCG CTGGCCCCGG TTTACCTCTTTATTG cydB 1475758 - 1474622 - | cytochrome D ubiquinol oxidase, subunit II SeD_A1526 1477314 - 1475770 - | cytochrome D ubiquinol oxidase subunit 1 TERM 1945 1476682 - 1476658 - G 100 -14.3 -3.83998 | TGAGCCGATAGCAAA CGAGCGCAAGG CCA CCTCACGCTCG CGGCCACGTAGCAGA SeD_A1527 1478237 - 1477389 - | hydrogenase-1 operon protein HyaF SeD_A1528 1478638 - 1478234 - | hydrogenase-1 operon protein HyaE TERM 1946 1478379 - 1478350 - G 71 -4.3 -4.56597 | gap 1, opp_overlap 1478357, overlap 1478351 1478354 1478355 CGCCGTCTGTAAAAA CCAACGT-CGCCGG AAA CCGACGTACATTAA AGCGATCGCCGATAG hybD 1479224 - 1478628 - | hydrogenase expression/formation protein cybH 1479952 - 1479221 - | Ni/Fe-hydrogenase, B-type cytochrome subunit SeD_A1531 1481764 - 1479971 - | hydrogenase-1 large chain TERM 1947 1480312 - 1480328 + g 83 -7.9 -4.67904 | ATTTCTCGGTATTGG CGGTGGC CAG GTCGCCG TTTTTCAGGTTGGTC SeD_A1532 1482963 - 1481761 - | hydrogenase-1 small chain TERM 1948 1482427 - 1482441 + g 74 -7 -4.35017 | opp_overlap 1482423, overlap 1482429 GGCGATAATAGCGCT GGCGCC CGC GGCGGC TTTCTTCAGTTTTTC SeD_A1533 1483651 - 1483538 - | hypothetical protein SeD_A1534 1484246 - 1483794 - | hypothetical protein TERM 1949 1484233 - 1484206 - G 100 -2.7 -6.01725 | overlap 1484210 AAGAAAAATAAAAAA CAACCGAAGTA CATAAT CACTTCGCCTG AATTCTGAAACATTT SeD_A1535 1484566 - 1484285 - | hypothetical protein SeD_A1536 1484747 - 1484872 + | hypothetical protein TERM 1950 1485601 - 1485584 - T 100 -11.3 -5.01811 | opp_overlap 1485584 TTATGAAATGAAAAA TCCACGC CATT GCGTGGA TTTTATAGAGTTTTA TERM 1951 1485584 - 1485601 + T 95 -11.3 -4.46581 | opp_overlap 1485584 TTATGAAATGAAAAA TCCACGC CATT GCGTGGA TTTTATAGAGTTTTA engD 1486755 - 1485664 - | GTP-binding protein EngD TERM 1952 1486867 - 1486840 - R 70 -9.8 -2.94099 | opp_overlap 1486839 1486838 TTCGCCTATTATACA CGGCGTGCGGCA AAAA TGCCGCACATCA CTGGTTATTGCGCCT pth 1487456 - 1486872 - | peptidyl-tRNA hydrolase TERM 1953 1487599 - 1487627 + H 77 -9.1 -3.96148 | GTTCAGAGTGTTATT TGTAAAGTTTTGT TAA ATGAAACTTTACA TTTGTGATCGCACCC SeD_A1539 1487732 - 1488010 + | hypothetical protein SeD_A1540 1489740 - 1488055 - | sulfate transporter TERM 1954 1489833 - 1489846 + r 75 -9.5 -3.60475 | opp_overlap 1489833 TTACAGACAAAAAAA CCCGC CGCA GCGGG TTTCAGATCCGGGTT TERM 1955 1489846 - 1489833 - R 100 -9.5 -5.76633 | opp_overlap 1489833 TTACAGACAAAAAAA CCCGC CGCA GCGGG TTTCAGATCCGGGTT prs 1490812 - 1489865 - | ribose-phosphate pyrophosphokinase TERM 1956 1490943 - 1490929 - g 74 -10 -3.62522 | CAACGTCTGGAACAA GGTGAC GTT GTCACC GAAGCTCAGCTTGCC SeD_A1542 1490911 - 1491081 + | hypothetical protein ispE 1491926 - 1491078 - | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase TERM 1957 1491541 - 1491498 - G 71 -6.1 -4.24342 | gap 3, opp_overlap 1491500, overlap 1491500 GTGGCCACGAACAAA GACCGG-GACG-TCGGCGCCGA GCG TCAG-GCCGAGCGTCGCCAGTT CATCAATGGAAAGCC TERM 1958 1491539 - 1491500 - G 70 -8.7 -3.72374 | gap 3, opp_overlap 1491500, overlap 1491498 GGCCACGAACAAAGA CCGG-GACG-TCGGCGCCGA GCG TCAG-GCCGAGCGTCGCCAG TTCATCAATGGAAAG TERM 1959 1491741 - 1491778 + g 77 -11.5 -3.57144 | gap 1, overlap 1491752 GACGATCAGGTTGTC TTCATTT-TCAACGCCGG TTA CCGGCGTTAATAAATGGA TTTCGCCATCGCGAC TERM 1960 1491752 - 1491766 + g 83 -12.8 -3.19656 | overlap 1491741 TGTCTTCATTTTCAA CGCCGG TTA CCGGCG TTAATAAATGGATTT lolB 1492549 - 1491926 - | outer membrane lipoprotein LolB SeD_A1545 1492567 - 1492695 + | hypothetical protein hemA 1492863 - 1494119 + | glutamyl-tRNA reductase TERM 1961 1494996 - 1494961 - g 82 -5.2 -4.98911 | overlap 1494967 CAGCATAAAAACAAA GCGAAAGCGCTCTCGG TGCT CGGGGCGCGCATTCAC GCCGCCGAAACGGCA TERM 1962 1495057 - 1495015 - g 93 -12 -4.24002 | gap 1, opp_overlap 1495023, overlap 1494967 1495008 1495007 1495016 GCCGAAACGGCAAAA CGCCA-GCAGGCCGAGGCG TCAACG CGCCGCAACCTGCTTGGCA GCGGCGATCGCAGCG TERM 1963 1495056 - 1495016 - g 84 -13.3 -3.13919 | gap 1, opp_overlap 1495023, overlap 1494967 1495008 1495007 1495015 CCGAAACGGCAAAAC GCCA-GCAGGCCGAGGCG TCAACG CGCCGCAACCTGCTTGGC AGCGGCGATCGCAGC prfA 1494160 - 1495242 + | peptide chain release factor 1 SeD_A1548 1495242 - 1496075 + | protein methyltransferase HemK TERM 1964 1496363 - 1496379 + G 73 -5.8 -4.51196 | gap 1 GATTATCGTCAGGCG CGCAGCC AGCA GGC-GCG TTTTATCGCTTTCCC SeD_A1549 1496084 - 1496461 + | protein sirB2 TERM 1965 1496756 - 1496744 - g 82 -5.5 -5.03747 | opp_overlap 1496752 AAAGTCCTGAAAAAA CGCCA GGG TAGCG CGGTATCGTTGGGCG sirB1 1496465 - 1497274 + | sirB1 protein TERM 1966 1497443 - 1497459 + G 73 -10.9 -3.406 | GCACTACGTAACCGT TACCCAG AAG CTGGGTA TTCCTTACGTGTTCA TERM 1967 1497880 - 1497900 + G 77 -8.2 -4.14392 | opp_overlap 1497879 1497880, overlap 1497883 GCGTGATGAAAAAGG TCTCCGGC AACTC GCCGGTGA TTTTCGACGTTACCC kdsA 1497312 - 1498166 + | 3-deoxy-8-phosphooctulonate synthase TERM 1968 1498189 - 1498210 + T 100 -10.2 -5.36441 | TTTTAGCTTGTGTAG GCCGGATA AGATAC TATCCGGC TTTTTTATATCAGGC SeD_A1552 1499320 - 1498220 - | calcium/proton antiporter TERM 1969 1498789 - 1498769 - G 81 -3.9 -5.1963 | overlap 1498771 TTGAATCAACAAAAA TACGCCG TACATCG CGGCGGA AATTAACGCGACCAA TERM 1970 1498787 - 1498771 - G 70 -6.5 -4.21997 | overlap 1498769 GAATCAACAAAAATA CGCCG TACATCG CGGCG GAAATTAACGCGACC TERM 1971 1499115 - 1499098 - G 74 -6.9 -4.22535 | overlap 1499087 ACAAGCTTAAAATAA GCGATCC ATAG GGTTCGC CGAGTCGGTGCGCTA SeD_A1553 1499588 - 1499818 + | hypothetical protein SeD_A1554 1500251 - 1499898 - | protein YchN SeD_A1555 1500428 - 1501852 + | hypothetical protein narL 1502503 - 1501853 - | nitrate/nitrite response regulator protein NarL SeD_A1557 1504292 - 1502496 - | nitrate/nitrite sensor protein NarX TERM 1972 1503700 - 1503655 - G 70 -9.7 -3.33492 | TTATTGAGCGCAGAA CCCAACGCGGCCATCTCATTG CGTC CACTGATATTGGCACGTTGGG TAAAGTCGCGCTGAC TERM 1973 1505134 - 1505118 - g 72 -2.1 -4.86731 | overlap 1505096 1505119 CTTTCCTAAACAAAA GCAGGGC GGC GCGCTGG GTCTGAACGGTGGTC TERM 1974 1505489 - 1505514 + G 70 -3.3 -4.69027 | gap 1, overlap 1505495 CTAAAACACAATTCC CGGATG-TGCAG ATC CTGCATTATGCG TTTTTCGGTCCGTTT TERM 1975 1505872 - 1505886 + G 89 -2.7 -5.4505 | overlap 1505864 TTTATTTCCGCGATT GGCGC GATTG GCGGC TTTTTTATTCCGAAA SeD_A1558 1504633 - 1506030 + | nitrite extrusion protein 1 TERM 1976 1506047 - 1506065 + F 100 -8.8 -5.83822 | TTTTGATTATCCTTT GCGCGG CGTTAGA CCGCGC TTTTTTTTACCTGTA TERM 1977 1506272 - 1506255 - f 76 -4.1 -5.07523 | opp_overlap 1506257, overlap 1506256 1506257 TATATATAAATAAAA CTCCTCC TCCA AAAGGAG TATGCAGGAGGTTTG TERM 1978 1506437 - 1506468 + G 74 -10.3 -3.57144 | gap 1, opp_overlap 1506460 GTAAATTCCTGAACC GGTTTCGCTACTTC AAGCA GAAG-GGCGAAACC TTTGCCGATGGGCAC TERM 1979 1506704 - 1506685 - g 73 -10.6 -3.33037 | overlap 1506678 ATGCCAAACCATGAA CCTCGCGG CTGC CCGCGCGG CGCAAGCTACTCCTG TERM 1980 1507562 - 1507541 - g 84 -8.7 -4.27584 | ACCCGGAATGGAAAA CCGTCGCTA TCAA CAGCAACGG TGAAATGGTGGCGCC TERM 1981 1508178 - 1508167 - g 78 -5.8 -4.72272 | opp_overlap 1508174, overlap 1508169 GTCGGCCAGGAAAAA CTGC GTCC GCAG ACCGGCTGGCAGCCG TERM 1982 1508819 - 1508832 + G 74 -6.7 -4.25056 | opp_overlap 1508810 ACGATATGAATACCT CGGAT ATGC ATCCG TTTATTCATCCGCTG narG 1506418 - 1510161 + | nitrate reductase 1, alpha subunit TERM 1983 1510255 - 1510241 - g 73 -5.6 -4.60041 | AGTCACCTGTAAAAA CGTCTG GAC CAGTCG CGAAGGTATGGAATA TERM 1984 1510545 - 1510517 - g 71 -9.6 -3.48105 | gap 1, opp_overlap 1510521, overlap 1510515 GGAAGGCAGCAAACA TCAGCCGATCGCG CGTC CGCGCTCG-CTGA TTACCGGCCAGCGGA narH 1510158 - 1511696 + | nitrate reductase 1, beta subunit TERM 1985 1511809 - 1511825 + G 86 -10.1 -4.25848 | opp_overlap 1511809 1511804, overlap 1511810 CCTGGAGAAAGAGGA TGCCCAG ACT CTGGGCG TTTTCCTGCGCGATT TERM 1986 1511810 - 1511824 + G 72 -11.4 -3.15027 | opp_overlap 1511809 1511804, overlap 1511809 CTGGAGAAAGAGGAT GCCCAG ACT CTGGGC GTTTTCCTGCGCGAT narJ 1511693 - 1512403 + | nitrate reductase molybdenum cofactor assembly chaperone 1 narI 1512403 - 1513080 + | respiratory nitrate reductase, gamma subunit TERM 1987 1513116 - 1513101 - T 79 -10.4 -3.55444 | opp_overlap 1513101 TCTCGATGCCCTAAA CTCCGC TTCG GCGGAG TTTTTTTATGGCTGT TERM 1988 1513101 - 1513116 + T 100 -10.4 -5.65177 | opp_overlap 1513101 TCTCGATGCCCTAAA CTCCGC TTCG GCGGAG TTTTTTTATGGCTGT SeD_A1563 1513286 - 1513122 - | hypothetical protein TERM 1989 1513490 - 1513476 - g 71 -8.5 -3.90574 | AACAAGGAGATGAAA GCGCG CAGTT CGCGC TTGGAAGCTGGTATG TERM 1990 1513556 - 1513538 - g 71 -7.4 -3.96892 | overlap 1513541 AAGCCTGATTATAAA CTAGCCAT AAA ATGGCTGG AGAAAGCGGGTAAAC SeD_A1564 1513322 - 1514851 + | tetratricopeptide repeat protein TERM 1991 1515002 - 1515020 + T 79 -8.8 -4.02534 | overlap 1514991 1515003 GTTTCGCCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTTTCGCT TERM 1992 1515003 - 1515019 + T 80 -12.3 -3.00797 | overlap 1514991 1515002 TTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTTTCGC TERM 1993 1515177 - 1515195 + T 77 -8.8 -3.92373 | overlap 1515166 1515178 GCTTCGCCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTGCGCTC TERM 1994 1515178 - 1515194 + T 80 -12.3 -2.95102 | overlap 1515166 1515177 CTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTGCGCT TERM 1995 1515351 - 1515369 + T 77 -8.8 -3.92075 | overlap 1515340 1515352 GCTTCGCCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTGACGCT TERM 1996 1515352 - 1515368 + T 80 -12.3 -2.94924 | overlap 1515340 1515351 CTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTGACGC TERM 1997 1515936 - 1515952 + T 88 -12.3 -3.5518 | CCTCACCCTTCGGGC CGTTGCC TGC GGCAACG TTCTCTCACTATTGC TERM 1998 1516087 - 1516058 - T 70 -10 -3.06261 | gap 1, opp_overlap 1516059 GGGTAATGCTTAATA CTGGCCCGCTTCC TTTTG GGAAGCGGGGC-G CATCATATCAAATGA purU 1517040 - 1516198 - | formyltetrahydrofolate deformylase TERM 1999 1516262 - 1516231 - G 73 -5.8 -4.41616 | gap 1, overlap 1516233 ATTGCCGTAAACAAA GACTCGCTGTGCCAG AAC CTGATACAGCGCG-C GGCTTAATACGTTTT TERM 2000 1516261 - 1516233 - G 76 -9.5 -3.81557 | overlap 1516231 TGCCGTAAACAAAGA CTCGCTGTGCCAG AAC CTGATACAGCGCG CGGCTTAATACGTTT SeD_A1573 1517597 - 1517091 - | protein YchJ TERM 2001 1517588 - 1517574 - G 100 -7.8 -5.47159 | opp_overlap 1517584 1517585, overlap 1517575 CCTGAATATAAAAAA CGGCGT TGA ACGCCA GGGTGGCATTATGTT TERM 2002 1517587 - 1517575 - G 73 -9.1 -3.87211 | opp_overlap 1517584 1517585, overlap 1517574 CTGAATATAAAAAAC GGCGT TGA ACGCC AGGGTGGCATTATGT SeD_A1574 1517660 - 1518565 + | phospholipase, patatin family TERM 2003 1518943 - 1518925 - g 71 -4.5 -4.66537 | overlap 1518927 TTCCGCAACAGAAAA TATGGCG GATAT CGCCAAA GCGTTACGCCTTGGG SeD_A1575 1518656 - 1519669 + | response regulator receiver domain protein galU 1519872 - 1520780 + | UTP-glucose-1-phosphate uridylyltransferase TERM 2004 1520808 - 1520826 + T 100 -9.5 -5.64274 | opp_overlap 1520808 AATTTTTTAACAGAA GCGCTGG TAAAT CCGGCGC TTTTTTTATGCCTGG TERM 2005 1520889 - 1520873 - T 100 -13.7 -5.81412 | opp_overlap 1520873 CTCAGGCAAAAAAAA TCCCGCC AGC GGCGGGA TTTTAAGCATCCAGG TERM 2006 1520873 - 1520889 + T 100 -13.7 -4.11216 | opp_overlap 1520873 CTCAGGCAAAAAAAA TCCCGCC AGC GGCGGGA TTTTAAGCATCCAGG hns 1521325 - 1520912 - | DNA-binding protein H-NS TERM 2007 1520989 - 1521003 + g 78 -7.1 -4.55128 | opp_overlap 1520976 CAGCCGGTGTACGAC CCTGG CCAGT CCAGG TTTTAGTTTCACCGT tdk 1521988 - 1522605 + | thymidine kinase TERM 2008 1522773 - 1522756 - T 100 -12.7 -6.09196 | opp_overlap 1522756 GGTAAAACAAAAAAA CGGCCTC AATT GAGGCCG TTATTGTCATGCTAA TERM 2009 1522756 - 1522773 + T 95 -12.7 -3.85864 | opp_overlap 1522756 GGTAAAACAAAAAAA CGGCCTC AATT GAGGCCG TTATTGTCATGCTAA TERM 2010 1522806 - 1522819 + T 83 -4.5 -5.43487 | opp_overlap 1522806 CAGATAACGAATTAA GCGGA TTTT TTCGC TTTTTTCTCTGCTTT adhE 1525480 - 1522802 - | aldehyde-alcohol dehydrogenase TERM 2011 1524598 - 1524614 + g 71 -4.3 -4.59773 | overlap 1524599 GCTGACCGACGATAG CGGCGTT CAG AGCGCCA TTTTTCAGGATAACG TERM 2012 1525181 - 1525165 - G 74 -8 -3.95378 | CGATACCGCAAATAA TGCCGA TAGGT TCGGCA ATGGTGATGGTCCCG TERM 2013 1526030 - 1526044 + G 77 -7.8 -4.26076 | overlap 1526024 1526031 CGCTGGTTAACCCGG TGGGGA TTA TCCCCG TTTTCATCAGCATGA SeD_A1580 1525957 - 1526604 + | hypothetical protein TERM 2014 1526626 - 1526647 + F 90 -13.7 -3.36492 | gap 1 ACCTGCTGATTTACA GGCGGCGCCC TAA GGG-GCCGCC TTGTGACATTCCCAC TERM 2015 1527851 - 1527833 - g 74 -2.4 -5.00884 | gap 1, overlap 1527834 ATCGCCGGTAAAAAA CCCGCCA CCGATC TGG-GGG TAAAAGCGCTTGATG SeD_A1581 1527368 - 1528999 + | periplasmic oligopeptide-binding protein TERM 2016 1529003 - 1529038 + F 82 -5.4 -5.14965 | opp_overlap 1529008 1529010, overlap 1529005 1529007 1529008 1529010 ATCAAACATTAATGG CAAGACATGGGACAAC TGCG GTTGTCCCATGGTGTC TTTTTTCATCGCACT TERM 2017 1529005 - 1529036 + F 76 -8 -4.20707 | opp_overlap 1529008 1529010, overlap 1529003 1529007 1529008 1529010 CAAACATTAATGGCA AGACATGGGACAAC TGCG GTTGTCCCATGGTG TCTTTTTTCATCGCA TERM 2018 1529007 - 1529034 + F 93 -12.8 -3.69447 | opp_overlap 1529008 1529010, overlap 1529005 1529003 1529008 1529010 AACATTAATGGCAAG ACATGGGACAAC TGCG GTTGTCCCATGG TGTCTTTTTTCATCG TERM 2019 1529033 - 1529008 - f 93 -16.3 -3.10732 | opp_overlap 1529007 1529005 1529003 1529008 1529010, overlap 1529010 ACATTAATGGCAAGA CATGGGACAAC TGCG GTTGTCCCATG GTGTCTTTTTTCATC TERM 2020 1529008 - 1529033 + F 93 -16.3 -2.80583 | opp_overlap 1529008 1529010, overlap 1529007 1529005 1529003 1529010 ACATTAATGGCAAGA CATGGGACAAC TGCG GTTGTCCCATG GTGTCTTTTTTCATC TERM 2021 1529010 - 1529031 + F 82 -13.1 -2.92912 | opp_overlap 1529008 1529010, overlap 1529008 1529007 1529005 1529003 ATTAATGGCAAGACA TGGGACAAC TGCG GTTGTCCCA TGGTGTCTTTTTTCA TERM 2022 1529031 - 1529010 - f 82 -13.1 -3.10879 | opp_overlap 1529010 1529008 1529007 1529005 1529003, overlap 1529008 ATTAATGGCAAGACA TGGGACAAC TGCG GTTGTCCCA TGGTGTCTTTTTTCA oppB 1529121 - 1530041 + | oligopeptide ABC transporter, permease protein OppB TERM 2023 1530088 - 1530076 - g 100 -9.1 -5.1963 | GTTAAGTAAGAAAAA CAGCG AGA CGCTG GAAAATTTCAGTGAA oppC 1530056 - 1530964 + | oligopeptide ABC transporter, permease protein OppC oppD 1530976 - 1531983 + | oligopeptide ABC transporter, ATP-binding protein OppD oppF 1531980 - 1532984 + | oligopeptide ABC transporter, ATP-binding protein OppF TERM 2024 1532991 - 1533011 + F 95 -12.6 -4.21812 | opp_overlap 1532986 1532985 CCGTTATAATCGCAA GGGCTGAC AATTC GTCAGCCC TTCTTTTAGGTGAGG SeD_A1586 1533032 - 1533868 + | Ion transport protein SeD_A1588 1535739 - 1534279 - | cardiolipin synthetase SeD_A1589 1535918 - 1536055 + | hypothetical protein TERM 2025 1536083 - 1536064 - T 100 -15 -3.91897 | opp_overlap 1536053 1536050 1536077 TGTGTGAGCCAGAAA GGGCACCG TATG CGGTGCCC AACAGGCCATCCTTT SeD_A1590 1536395 - 1536099 - | protein YciI SeD_A1591 1536619 - 1537347 + | protein TonB SeD_A1592 1537799 - 1537407 - | acyl-CoA thioester hydrolase YciA TERM 2026 1537479 - 1537467 - G 70 -3.3 -4.68511 | GGCAACATAAATAAA CAGCG CCT CGGTG GCCTTGTAGCGCTGT ispZ 1538508 - 1537969 - | intracellular septation protein A TERM 2027 1538147 - 1538134 - G 87 -2.3 -5.60689 | GCACACAATAAAAAA CAGCG CCCA CGCCA GGTTCAGCTTTGACC TERM 2028 1538430 - 1538397 - G 85 -11.1 -3.92869 | gap 1, opp_overlap 1538421, overlap 1538400 1538421 1538424 GCACCCAGCTATAAA TCAGCAC-GATTGCCG TCG CGACAATCAGTGCGGA GGTCGCCGCATAGAT TERM 2029 1538427 - 1538400 - G 72 -11.4 -3.02745 | gap 1, opp_overlap 1538421, overlap 1538397 1538421 1538424 CCCAGCTATAAATCA GCAC-GATTGCCG TCG CGACAATCAGTGC GGAGGTCGCCGCATA TERM 2030 1538534 - 1538563 + r 72 -10.8 -2.77344 | gap 1, opp_overlap 1538531, overlap 1538533 CATCATCAACGAGCG TCG-AATGCGCCG CGTAA CGGCGCATTGCGG ATTATTGGCGAATCA SeD_A1594 1539308 - 1538565 - | membrane protein YciC SeD_A1595 1539738 - 1539334 - | ferredoxin TERM 2031 1539566 - 1539576 + g 74 -3.2 -4.90266 | opp_overlap 1539558 CCAATTAGCGCTTTA CAGT GCG GCTG TTTTTGGTTGGTACC TERM 2032 1539998 - 1540016 + H 74 -8.2 -3.86634 | opp_overlap 1539993 1539998 1539997 ATTATAAGAACAAAT GTGATCTG TGT TAGATCAC TTATTACTTCATTGT SeD_A1596 1540076 - 1540714 + | outer membrane protein W TERM 2033 1540757 - 1540739 - T 100 -16 -5.14563 | GTTGTGACGAAAAAA GACCCCGC CAG GCGGGGTC AAAAAAGGACATGAC SeD_A1597 1541674 - 1540796 - | catalase SeD_A1598 1542200 - 1541694 - | YciE SeD_A1599 1542777 - 1542274 - | protein YciF TERM 2034 1542350 - 1542362 + g 70 -5.5 -4.42464 | overlap 1542351 AAATCAGTTTGTTTT TCCTC GTC GAGGG TTTCTTTGAGCAGTT SeD_A1600 1543049 - 1542867 - | hypothetical protein TERM 2035 1543097 - 1543084 - R 70 -2.3 -5.00616 | overlap 1543085 TGCTTGCTGAAAAAA TCGGT TTTA ACCGT GTCGACACCCTATTA TERM 2036 1543202 - 1543212 + r 72 -2.6 -5.09259 | opp_overlap 1543202, overlap 1543197 ATGGTTTAGAGATAA TATA TTC TATA TTTTCTTTTAGAATA TERM 2037 1543493 - 1543525 + r 74 -11.3 -2.82742 | opp_overlap 1543498, overlap 1543490 1543498 CGGCGCCAGCCACTC ATTAAGCCGCCAGCG TTA TGCTGACGGCTTAAC TCGTTATGCGCGGCT TERM 2038 1543498 - 1543520 + r 77 -11.2 -3.14963 | opp_overlap 1543498, overlap 1543493 1543490 CCAGCCACTCATTAA GCCGCCAGCG TTA TGCTGACGGC TTAACTCGTTATGCG TERM 2039 1543520 - 1543498 - R 81 -12.7 -3.18912 | opp_overlap 1543498 1543493 1543490 CCAGCCACTCATTAA GCCGCCAGC GTTAT GCTGACGGC TTAACTCGTTATGCG trpA 1544335 - 1543529 - | tryptophan synthase, alpha subunit trpB 1545528 - 1544335 - | tryptophan synthase, beta subunit SeD_A1603 1546896 - 1545538 - | tryptophan biosynthesis protein trpCF TERM 2040 1545598 - 1545576 - G 70 -9.8 -3.34236 | opp_overlap 1545597, overlap 1545578 AAACCGAGGCCAGAA GACGAGCATC TTT GATGCCCGGC TGTGACTCCACACCT TERM 2041 1545596 - 1545578 - G 74 -11 -3.23572 | overlap 1545576 ACCGAGGCCAGAAGA CGAGCATC TTT GATGCCCG GCTGTGACTCCACAC TERM 2042 1546509 - 1546496 - G 71 -8.1 -3.81287 | GAGAGCATCAGTAAA CAGGC ATCG GCCTG ATAGTAACGGGCAAG trpD 1548495 - 1546900 - | anthranilate synthase, component II TERM 2043 1547074 - 1547092 + g 71 -4.4 -4.63932 | opp_overlap 1547074 TTTACCTTGTAATAA CCGCGTCA GAA TGTCACGG TTTTCTTCCGGCGTG TERM 2044 1547373 - 1547390 + g 70 -2.7 -4.74706 | gap 1, overlap 1547361 1547376 TCAGCGGGCCGAGTA CGTTGAAC AGG GTTC-GCG TTTTTAACTGTTGGC trpE 1550057 - 1548495 - | anthranilate synthase, component I TERM 2045 1549268 - 1549251 - G 70 -6.9 -4.1899 | GCAGGGCAGTGAAAA GCGGCGC GACG GCACCAC CTGAAATATCTCCCC TERM 2046 1550106 - 1550088 - H 100 -10.2 -5.75342 | TTTGTTCAAAAAAAA GCCCGCTT AAC AGGCGGGC CGGGTATCGTTTGGC TERM 2047 1550601 - 1550622 + G 74 -6.6 -4.36914 | overlap 1550603 GTCTGAATATTGATA TTGCGCAT CCGGCA ATGCGCGA TTTTCTGGCGCAGCA TERM 2048 1550725 - 1550767 + G 74 -8.3 -3.9712 | gap 1, overlap 1550726 GGAAGGGGCATTGAG ACTGGCCAA-TGGCGGCGCG GTGA CGCGCGGCCACTTCGCCCGC TTTCTGGTGGAGTGC TERM 2049 1550726 - 1550766 + G 75 -11.8 -2.97951 | gap 1, overlap 1550725 GAAGGGGCATTGAGA CTGGCCAA-TGGCGGCGCG GTGA CGCGCGGCCACTTCGCCCG CTTTCTGGTGGAGTG SeD_A1607 1550351 - 1551199 + | putative phosphoesterase TERM 2050 1551421 - 1551461 + G 71 -8.4 -3.86202 | gap 1 TGATGTGCCGCGATT TGTCCGAGTTGTCGACCTA CTCC TACGTCGACAACGTGG-CA TTTCGTCTGATGAAA SeD_A1608 1551207 - 1551827 + | Sua5/YciO/YrdC/YwlC family protein TERM 2051 1551861 - 1551878 + F 79 -10.5 -3.49851 | opp_overlap 1551848 1551861 1551862, overlap 1551857 1551862 TACGCGGCCTTAAAA TGGCGCG GCAA CGCGCCG TTCATTCTCCTGTTC TERM 2052 1551878 - 1551861 - f 76 -8.3 -4.07885 | opp_overlap 1551861 1551857 1551862, overlap 1551848 1551862 TACGCGGCCTTAAAA TGGCGCG GCAA CGCGCCG TTCATTCTCCTGTTC TERM 2053 1551877 - 1551862 - f 78 -11.8 -3.04517 | opp_overlap 1551862 1551861 1551857, overlap 1551848 1551861 ACGCGGCCTTAAAAT GGCGCG GCAA CGCGCC GTTCATTCTCCTGTT TERM 2054 1551862 - 1551877 + F 76 -11.8 -2.69188 | opp_overlap 1551848 1551861 1551862, overlap 1551861 1551857 ACGCGGCCTTAAAAT GGCGCG GCAA CGCGCC GTTCATTCTCCTGTT TERM 2055 1552046 - 1552031 - g 80 -9 -4.13767 | opp_overlap 1552031 1552028 GCGTTGACGGTAAAA TCGCCA CGCT TGGCGA TCGTGTTGAAGTCAC TERM 2056 1552616 - 1552594 - g 74 -10.4 -3.53091 | ATCCCGCTGCCGAAA GGCCTGCCGC GCG GCGGCTGGAC TGAGCTCGACCTCGC rluB 1551928 - 1552803 + | ribosomal large subunit pseudouridine synthase B TERM 2057 1552872 - 1552844 - T 70 -8.8 -3.36018 | opp_overlap 1552844 1552847, overlap 1552842 AATCATCAGACAAGA GGGTTTGTGCCG GATGG CGGCGCAAACGC CTTAATCCGGCCTAC TERM 2058 1552844 - 1552873 + T 74 -10.8 -3.14931 | gap 1, opp_overlap 1552842 1552844, overlap 1552847 AATCATCAGACAAGA GG-GTTTGTGCCG GATGG CGGCGCAAACGCC TTAATCCGGCCTACG cobO 1553480 - 1552890 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 2059 1553031 - 1553047 + g 73 -10.8 -3.3676 | CGTCTGGTGACCAGG GCGCGC GTTTA GCGCGC TTATGACCTCTTCCA SeD_A1611 1554238 - 1553477 - | oxidoreductase, short chain dehydrogenase/reductase family TERM 2060 1554077 - 1554094 + g 77 -7.7 -4.2772 | gap 1 CTCGTCAGCAATGTG CTGCG-CG ACC CGACGCAG TTTCTCTTCGTTGCG SeD_A1612 1554476 - 1555522 + | putative signal peptide peptidase SppA, 36K type TERM 2061 1555531 - 1555559 + T 90 -16.1 -2.56596 | opp_overlap 1555525 1555524, overlap 1555526 GATGTAAACCGCTAT TGCCGGATGGC ATTCAGC GCCATCCGGCA TGGATTAATCAACCA SeD_A1613 1555815 - 1555564 - | protein YciN TERM 2062 1555599 - 1555634 + g 74 -7.7 -4.11692 | gap 1, opp_overlap 1555598, overlap 1555594 TCTCAGACAGCACAT GCGCC-AGGTGTTTAA ACATG TTAAACACCGCGGTGC TTTTAGGGGTCGGTA TERM 2063 1557139 - 1557128 - g 71 -4.4 -4.63218 | opp_overlap 1557138 TTGGCGTGAAGAAAA CCAT GATG ATGG CGCAGCGTCTGTATG TERM 2064 1557800 - 1557782 - g 76 -3.1 -5.03314 | overlap 1557784 TCTATGCGGAAAAAA TGGGTGA AATCG TCACCGA TCGGCTGGAAGAAAA topA 1556218 - 1558815 + | DNA topoisomerase I TERM 2065 1558844 - 1558861 + F 100 -14.1 -5.37043 | opp_overlap 1558842 CCACTGTAGTCAAGC GGGCCGC GTAA GCGGCCC TTTTTTATATCCCCT SeD_A1615 1559226 - 1560200 + | HTH-type transcriptional regulator CysB SeD_A1616 1560493 - 1560621 + | hypothetical protein SeD_A1617 1560631 - 1560792 + | hypothetical protein TERM 2066 1561005 - 1561030 + F 93 -9.1 -4.90136 | opp_overlap 1561005 TCTAATCTCGTCAAA GCCCGATAA TGCGTTAT TTATCGGGC TTTTTCATCTTCGTT TERM 2067 1561030 - 1561005 - f 72 -9.1 -3.55622 | opp_overlap 1561005 TCTAATCTCGTCAAA GCCCGATAA TGCGTTAT TTATCGGGC TTTTTCATCTTCGTT TERM 2068 1561432 - 1561446 + G 71 -10 -3.54543 | TGGCGGCCCGCCCGT GTCCTG ATG CAGGAC TTTACCGGCGTGCCT TERM 2069 1563471 - 1563461 - g 100 -8.2 -5.19212 | opp_overlap 1563460 ACCAGCAGGAAAAAA CGCC GCT GGCG GTAATTGCCGGGAAA acnA 1561177 - 1563852 + | aconitate hydratase 1 ribA 1564498 - 1563908 - | GTP cyclohydrolase II SeD_A1620 1564694 - 1565458 + | phosphatidylglycerophosphatase B SeD_A1621 1565608 - 1565916 + | hypothetical protein TERM 2070 1566063 - 1566007 - g 76 -3.2 -5.09762 | gap 2 GCGCAACAAACAAAA CAGGATGAAGCTAACCGCCTGTCG CGCGATTATGT CG-CAGG-GGTTAACTTCCTGCTG AGTAACCAACAAGAT SeD_A1622 1565923 - 1567092 + | tetratricopeptide repeat protein SeD_A1624 1567267 - 1567142 - | hypothetical protein TERM 2071 1567602 - 1567630 + GH 91 -14.5 -3.06183 | opp_overlap 1567599 1567602 GTGGGGCGAGAATGA TGGCCGCAGCGCG CGA CGCGCTGGCGCCA TTCGGTAAAGATGCG TERM 2072 1567630 - 1567602 - gH 87 -14.5 -2.82623 | opp_overlap 1567602, overlap 1567599 GTGGGGCGAGAATGA TGGCCGCAGCGCG CGA CGCGCTGGCGCCA TTCGGTAAAGATGCG pyrF 1567223 - 1568020 + | orotidine 5'-phosphate decarboxylase SeD_A1625 1568020 - 1568346 + | putative translation initiation factor SUI1 TERM 2073 1568378 - 1568353 - T 100 -11.9 -4.4078 | GGCGGCTAATGAAAA CGCCACGGT TGTAAATT ACCGTGGCG TAAAAGTCAACTTTG SeD_A1626 1568684 - 1568466 - | hypothetical protein SeD_A1627 1569695 - 1568943 - | transcriptional regulator, DeoR family TERM 2074 1569465 - 1569476 + g 74 -7.2 -4.18058 | CGAGGCGGCGAACTC CGCC AGTC GGCG TTTTAGCGTGTAGTT SeD_A1628 1569961 - 1569782 - | hypothetical protein SeD_A1629 1572074 - 1570083 - | cyclic diguanylate phosphodiesterase (EAL) domain protein TERM 2075 1570910 - 1570895 - G 77 -3.9 -5.00616 | TTTCCGGCGAAAAAA CGCAG AACTGA CCGCG GCCGCCTTCTTTGGC TERM 2076 1571600 - 1571551 - G 100 -10.2 -5.42259 | opp_overlap 1571551 1571554, overlap 1571562 CCATTGCGAAAAAAA TTCTCAATGTAGT-GCCGGGAGGC AACC GCCTCCCGGCGACT-CATAAATAA TTTAAAGACGCTTTG TERM 2077 1571590 - 1571562 - G 89 -16.8 -2.54655 | gap 1, opp_overlap 1571554 1571551, overlap 1571551 AAAATTCTCAATGTA GT-GCCGGGAGGC AACC GCCTCCCGGCGAC TCATAAATAATTTAA TERM 2078 1571931 - 1571947 + g 90 -4.4 -5.4251 | gap 1 ACGCCCGGCTTGCTC CGG-CGA TAGC TCGACCG TTTTTTCTGTATCCG TERM 2079 1572307 - 1572281 - R 100 -14.5 -4.96427 | GAAGAAGAAAAGAAA CGGCCTTTGCC TTCTC AGCAAAGGCCG TTGAGCGAGCTAAGC rnb 1574261 - 1572327 - | exoribonuclease II TERM 2080 1573379 - 1573365 - G 80 -4.2 -5.00616 | overlap 1573367 GGTGGCCGCAAAAAA GGCGAT ATC ATCGTC AATGGTGCCGTCCGC TERM 2081 1574360 - 1574372 + r 72 -4.8 -4.60924 | ATGAGTTAATAGGTT TCGC CCAAC GCGA TTTTTAAACGATTTA TERM 2082 1574478 - 1574468 - R 70 -2.4 -5.03715 | AGTAGCGGGAAAAAA TGCG CGG CGCT AAAGCGATCGGGCGC TERM 2083 1574835 - 1574850 + r 72 -10.4 -2.85847 | opp_overlap 1574834, overlap 1574845 GATATTCTACCAGAC TGGCGG CGGG CCGCCA TATCGTCTGGGGGTT fabI 1576471 - 1575683 - | enoyl-(acyl-carrier-protein) reductase (NADH) SeD_A1633 1577041 - 1576862 - | putative e6 protein SeD_A1634 1577472 - 1578449 + | putative inner membrane protein TERM 2084 1578827 - 1578850 + F 73 -2.4 -5.20534 | ATATATTGTTTTTTT CGATCATTTT TTAT ATATTGATCG TTTTTATTGATTGAT SeD_A1635 1578916 - 1579623 + | hypothetical protein sapF 1580445 - 1579639 - | peptide ABC transporter, ATP-binding protein SapF TERM 2085 1579978 - 1579950 - G 80 -8.7 -4.09685 | opp_overlap 1579951, overlap 1579932 1579951 1579953 CTTTAGGGCGTAAAA TCAGCGCGCGGGC CAG GCCCAGACGCTGT TTCTGCCCCGGCGCC TERM 2086 1579977 - 1579951 - G 76 -12.2 -3.05597 | opp_overlap 1579951, overlap 1579932 1579950 1579953 TTTAGGGCGTAAAAT CAGCGCGCGGGC CAG GCCCAGACGCTG TTTCTGCCCCGGCGC sapD 1581439 - 1580447 - | peptide ABC transporter, ATP-binding protein SapD sapC 1582329 - 1581439 - | peptide ABC transporter, permease protein SapC TERM 2087 1582048 - 1582024 - G 85 -11.3 -3.96624 | CAGCGTTACGATAAA CGCGCCGCCGA CCG TGGGCGCCGCG CCGCTTAACAGGCGG sapB 1583281 - 1582316 - | peptide ABC transporter, permease protein SapB TERM 2088 1582809 - 1582819 + g 71 -8.2 -3.78329 | opp_overlap 1582809 TCAATGATGGCGAAA CCGG TAA CCGG TTTAACTTCATAAAG SeD_A1640 1584927 - 1583278 - | peptide transport periplasmic protein SapA pspF 1586034 - 1585039 - | psp operon transcriptional activator TERM 2089 1585124 - 1585152 + g 72 -2.5 -4.87626 | gap 1, opp_overlap 1585139, overlap 1585139 TTCTGGTTAAATTTC GC-CTGTTGTAA GCTACG TTGCAGCAGCGC TTTTTCCTGTTGCAG TERM 2090 1586032 - 1586043 + g 71 -4.4 -4.60924 | CATGATGAAAATCGC CACT TGTT AGTG TTTTTCACCACTTTA TERM 2091 1586265 - 1586253 - g 89 -9.1 -4.56597 | GCGTTGTTGGAAAAA GCGGA AGA TCCGC AGAAGCTGGTGCGCC pspA 1586190 - 1586858 + | phage shock protein A pspB 1586918 - 1587142 + | phage shock protein B pspC 1587142 - 1587501 + | phage shock protein C pspD 1587524 - 1587742 + | phage shock protein PspD SeD_A1646 1587818 - 1588132 + | phage shock protein E TERM 2092 1588140 - 1588130 - f 89 -4 -5.72207 | opp_overlap 1588130 CCGAAAGTAAAAAAA TAGA TAA TCTA TTGCTCAATACTCAT TERM 2093 1588164 - 1588180 + F 83 -10.8 -3.80018 | opp_overlap 1588161 TACTCATACTAACCG CGGCGC TTAAT GCGCCG TTGTTGATCTCTCCG TERM 2094 1588229 - 1588244 + F 71 -3.3 -4.84921 | TTTTGCACATATCTA TAACG CAGGCT CGTTA TTATTTTTTCTTCTC TERM 2095 1588867 - 1588841 - g 77 -7.2 -4.25283 | gap 1, opp_overlap 1588841 1588840 ACCCGCCGATGAAAA CCGGCTGGCGG AGATTG CCGCC-GCCTG GACGGATTATTTGCA SeD_A1647 1588281 - 1589678 + | YcjX SeD_A1648 1589675 - 1590736 + | hypothetical protein TERM 2096 1590745 - 1590781 + F 72 -5 -4.58663 | gap 1, opp_overlap 1590718, overlap 1590746 1590747 GAAATGACCTTTCAC ATGGCGCTGACGGCCTG GCTT TACGCCG-CAGCGCCCG TTTTTCCGCCATGCT TERM 2097 1590747 - 1590779 + F 76 -12 -2.60508 | gap 1, opp_overlap 1590718, overlap 1590746 1590745 AATGACCTTTCACAT GGCGCTGACGGCCTG GCTT TACGCCG-CAGCGCC CGTTTTTCCGCCATG SeD_A1649 1590884 - 1592425 + | transcriptional regulatory protein TyrR TERM 2098 1592456 - 1592433 - T 100 -13.2 -5.70829 | opp_overlap 1592433 1592436 AAGAGTAGAAAAAAA GAAGGCCTCC GGAT AGAGGCCTTC TTGTGACAAAAGAGC TERM 2099 1592433 - 1592456 + T 81 -12.5 -3.28712 | opp_overlap 1592433, overlap 1592436 AAGAGTAGAAAAAAA GAAGGCCTC CGGATA GAGGCCTTC TTGTGACAAAAGAGC TERM 2100 1592436 - 1592453 + T 72 -8.4 -3.78934 | opp_overlap 1592433, overlap 1592433 AGTAGAAAAAAAGAA GGCCTC CGGATA GAGGCC TTCTTGTGACAAAAG TERM 2101 1592499 - 1592514 + T 77 -10.4 -3.41878 | opp_overlap 1592497 1592493 1592494, overlap 1592497 ACTGACAAACGTAGC GCCAGC CGGC GCTGGC TTATGCCTTCAGGAC SeD_A1650 1593021 - 1592515 - | thiol peroxidase TERM 2102 1593459 - 1593488 + G 76 -5 -4.72272 | gap 3, opp_overlap 1593453 AGCAGCAAAGCCTTG CCGGGCTGCTCGGCG TGA CGCTG-GC--CCCGG TTTTTACTACCGCGC SeD_A1651 1593137 - 1594102 + | mandelate racemase / muconate lactonizing enzyme, N- domain protein SeD_A1652 1594805 - 1594077 - | peptidase, M14C family SeD_A1653 1594995 - 1596608 + | periplasmic murein peptide-binding protein SeD_A1654 1597634 - 1596705 - | isoflavone reductase TERM 2103 1598345 - 1598364 + G 76 -2.7 -5.03314 | opp_overlap 1598316 1598314 ACCTGAACCACCGCA CCGGGCG TACCAC CGACTGG TTTTTTACGCGTGAG SeD_A1655 1597753 - 1598658 + | regulatory protein, LysR:LysR, substrate-binding SeD_A1656 1598934 - 1599803 + | 2,5-diketo-D-gluconic acid reductase A TERM 2104 1599843 - 1599879 + T 80 -12.4 -3.05963 | opp_overlap 1599838 1599848, overlap 1599846 CGCATGAACAGCTTC TAACACGGTTGCCG GAGCGTAGA CGGCAACCGTGTGA TATTCGCCTGGCCGT TERM 2105 1599846 - 1599876 + T 83 -14.1 -2.75074 | opp_overlap 1599838 1599848, overlap 1599843 ATGAACAGCTTCTAA CACGGTTGCCG GAGCGTAGA CGGCAACCGTG TGATATTCGCCTGGC TERM 2106 1599874 - 1599848 - T 75 -10.9 -3.04248 | opp_overlap 1599846 1599843, overlap 1599838 GAACAGCTTCTAACA CGGTTGCCG GAGCGTAGA CGGCAACCG TGTGATATTCGCCTG SeD_A1657 1600607 - 1599894 - | short-chain dehydrogenase/reductase SDR TERM 2107 1600139 - 1600157 + g 70 -8.8 -3.72893 | opp_overlap 1600121 1600120, overlap 1600140 1600142 GGGCCAGGCCGCGCG CCAGCCCT TGC AGGGCTGA TTTACTGGCGGCGTA TERM 2108 1600140 - 1600156 + g 72 -12.3 -2.83522 | opp_overlap 1600121 1600120, overlap 1600139 1600142 GGCCAGGCCGCGCGC CAGCCCT TGC AGGGCTG ATTTACTGGCGGCGT SeD_A1658 1600685 - 1601275 + | transcriptional regulator, TetR family TERM 2109 1601307 - 1601293 - f 73 -2.1 -5.15634 | overlap 1601294 CAGCGCATCAAAAAA CCTGA GCCAG TCAGA TACGGACAAACAGGG SeD_A1659 1601479 - 1601640 + | putative outer membrane lipoprotein SeD_A1660 1602963 - 1601854 - | hypothetical protein TERM 2110 1602157 - 1602183 + g 73 -5.3 -4.63107 | gap 1, overlap 1602155 GTTTCGCGAAAAGGT GTTAAGC-ACTG CCTT CAGTCGTTTAAC TTTTGCTTCTTTACT TERM 2111 1602544 - 1602532 - G 84 -6.3 -5.02074 | opp_overlap 1602531 1602532 TGAGCGGGTAAAAAA GAGAT TGA ATCTC ACTTTGTTCTGCAAT TERM 2112 1602886 - 1602866 - G 75 -3.9 -4.84527 | opp_overlap 1602868, overlap 1602868 GCGATATACGAAAAA CACGCTACC ATT GCTAGCGTT GTGTTTCTGATGGTT SeD_A1661 1604206 - 1603355 - | putative regulatory protein SeD_A1662 1604506 - 1605351 + | hypothetical protein TERM 2113 1605406 - 1605386 - f 73 -11.1 -2.64322 | overlap 1605385 1605383 ATCTTATTTAAATAC TCCCTCTGC CAG GCAGGGGGA TATAGCAGGAGACAA TERM 2114 1607077 - 1607109 + G 71 -4.2 -4.57073 | gap 1, overlap 1607080 1607093 AAGCGCAGCCAGACA GCAT-TGCGCAGAAG GTCA CTTCTGTGGAGGTGC TTTTTACGCCGGGTA SeD_A1663 1605426 - 1607408 + | hypothetical protein SeD_A1664 1607435 - 1608259 + | hypothetical protein SeD_A1665 1608397 - 1608915 + | putative thiol peroxidase SeD_A1666 1609360 - 1609022 - | hypothetical protein SeD_A1667 1610074 - 1609388 - | B3/4 domain protein TERM 2115 1609934 - 1609946 + g 70 -9.1 -3.64488 | overlap 1609932 TTGTCCGTTGATTAC GGCCT GAC AGGCC TCTTTTAACGCGATT TERM 2116 1610143 - 1610130 - g 79 -3.1 -5.2189 | overlap 1610119 1610135 CCAATGACCAAAAAA GTCAA CTTA TCGAC CACGGCGGGCGCCGA TERM 2117 1610343 - 1610353 + G 75 -6.8 -4.38712 | overlap 1610324 GCGGCAATGGGAGTG TCCG TGG CGGA TTTTGTCAACGTCGC SeD_A1668 1610118 - 1610720 + | transcriptional regulator, Cro/CI family TERM 2118 1610762 - 1610803 + G 100 -13.1 -5.18371 | gap 1, opp_overlap 1610765 1610766, overlap 1610767 1610768 CGTCATCCGGACAGA GAAGCCTCGGTGCCCGATAA GCG TTATCGGGCACCG-GCTATC TTTTATTTTGTCGCA TERM 2119 1610799 - 1610765 - g 95 -14.5 -3.59202 | gap 2, opp_overlap 1610762 1610767 1610768, overlap 1610766 CATCCGGACAGAGAA GCCTCGGTGCCCGATAA GCG TTATCGGGCACC--GGC TATCTTTTATTTTGT TERM 2120 1610799 - 1610766 - g 83 -14.7 -2.752 | gap 1, opp_overlap 1610762 1610767 1610768, overlap 1610765 ATCCGGACAGAGAAG CCTCGGTGCCCGATAA GCG TTATCGGGCACCG-GC TATCTTTTATTTTGT TERM 2121 1610767 - 1610799 + G 100 -17.1 -3.67607 | opp_overlap 1610765 1610766, overlap 1610762 1610768 TCCGGACAGAGAAGC CTCGGTGCCCGATAA GCG TTATCGGGCACCGGC TATCTTTTATTTTGT TERM 2122 1610768 - 1610798 + G 100 -20.6 -2.78124 | opp_overlap 1610765 1610766, overlap 1610767 1610762 CCGGACAGAGAAGCC TCGGTGCCCGATAA GCG TTATCGGGCACCGG CTATCTTTTATTTTG SeD_A1669 1610717 - 1610845 + | hypothetical protein SeD_A1670 1611837 - 1610806 - | MscS family inner membrane protein YnaI SeD_A1671 1612076 - 1612330 + | putative inner membrane protein uspE 1613332 - 1612385 - | universal stress protein E fnr 1614235 - 1613483 - | fumarate and nitrate reduction regulatory protein TERM 2123 1613519 - 1613531 + g 80 -9.1 -4.21908 | overlap 1613508 1613529 ACCGGCGAGGGCCGC CAGCG CAT CGCTG TTTTCAATAGTAATA TERM 2124 1613773 - 1613759 - G 71 -8.6 -3.78934 | overlap 1613762 TTTCTTCGACAATAA CAGGAT CAT ATCCTG ATCGCCTTTAATTTC TERM 2125 1614070 - 1614086 + g 78 -6.5 -4.62783 | CTTTAAACAGAGTTT GCCCTTT CTG AATGGGC TTTTTGCGCTCGATG SeD_A1674 1614946 - 1614431 - | methylated-dna--protein-cysteine methyltransferase SeD_A1675 1615204 - 1615767 + | Smr protein/MutS2 SeD_A1676 1616006 - 1616167 + | hypothetical protein SeD_A1677 1616178 - 1617332 + | methyl-accepting chemotaxis protein I TERM 2126 1617350 - 1617368 + F 88 -7.4 -5.03145 | overlap 1617314 ATACATGTTTGGTAA GCGCCT GTTGCTA AGGCGC TTTTTTCGCACGTTC zntB 1617478 - 1618461 + | zinc transport protein ZntB TERM 2127 1618649 - 1618668 + F 100 -9.3 -5.83822 | ATTGATTCGTACGAC GCCGACT TAGATT AGTCGGC TTTTTTTTGCCTGTA TERM 2128 1618982 - 1619011 + G 91 -15.1 -3.08813 | AATGTTTTGCCCGCC GCCCAGCTCAATA ACCT TACTGAGCTGGGC TATCTTGAGATGACG TERM 2129 1619756 - 1619745 - g 71 -7.2 -3.96327 | overlap 1619746 ATGCGGTAGGACAAA GCGC GTTG GCGC TCCACGGCGATCTGG TERM 2130 1620222 - 1620198 - g 83 -10.1 -4.13014 | opp_overlap 1620202, overlap 1620202 CGGATATTGGCAAAA TTAACGTGCAT CCA ATGCACGTTTA CGTCGCCGTACGTCA TERM 2131 1620202 - 1620218 + G 76 -10.9 -3.65351 | opp_overlap 1620198 1620202 TATTGGCAAAATTAA CGTGCAT CCA ATGCACG TTTACGTCGCCGTAC TERM 2132 1620218 - 1620202 - g 76 -10.9 -3.67622 | opp_overlap 1620202, overlap 1620198 TATTGGCAAAATTAA CGTGCAT CCA ATGCACG TTTACGTCGCCGTAC SeD_A1680 1618946 - 1620319 + | ATP-independent RNA helicase DbpA TERM 2133 1620323 - 1620362 + T 80 -10 -4.01381 | gap 1, opp_overlap 1620320 1620329, overlap 1620324 CTATTAAAATGATCG ATAGCATGGCGTCTCAGCG GAG TGCTGAGACGCC-TGCAGA TTATTTCACTTCGAT TERM 2134 1620324 - 1620361 + T 82 -13.5 -3.00106 | gap 1, opp_overlap 1620320 1620329, overlap 1620323 TATTAAAATGATCGA TAGCATGGCGTCTCAGCG GAG TGCTGAGACGCC-TGCAG ATTATTTCACTTCGA TERM 2135 1620357 - 1620329 - T 86 -14.6 -2.66008 | opp_overlap 1620324 1620323, overlap 1620320 AAATGATCGATAGCA TGGCGTCTCAGC GGAGT GCTGAGACGCCT GCAGATTATTTCACT SeD_A1681 1621298 - 1620363 - | YdaO SeD_A1682 1621490 - 1621350 - | Rac prophage; integrase SeD_A1683 1621509 - 1621661 + | hypothetical protein SeD_A1684 1621654 - 1621992 + | multidrug transporter EmrE SeD_A1685 1622476 - 1622042 - | universal stress protein F TERM 2136 1622903 - 1622922 + r 100 -13.6 -5.95539 | opp_overlap 1622896 1622903 CGTATAAATTGACAA GCCCGAAC GGAT GTTCGGGC TTTTTTTGTTTCCAG TERM 2137 1622922 - 1622903 - R 93 -13.6 -3.50047 | opp_overlap 1622903, overlap 1622896 CGTATAAATTGACAA GCCCGAAC GGAT GTTCGGGC TTTTTTTGTTTCCAG nifJ 1626482 - 1622958 - | pyruvate:ferredoxin (flavodoxin) oxidoreductase TERM 2138 1625485 - 1625499 + g 75 -11.4 -3.4582 | opp_overlap 1625478, overlap 1625484 AGATAAAGCGGCTCG GCCTGG GCG CCAGGC TCTTTGGTGCGATCC SeD_A1689 1626588 - 1626719 + | hypothetical protein SeD_A1690 1626758 - 1627024 + | putative cytoplasmic protein SeD_A1691 1627478 - 1627068 - | heat shock protein HslJ TERM 2139 1627582 - 1627559 - R 95 -12.4 -4.13767 | overlap 1627560 GGGGTTATCCGAAAA TGCTCCCCTG AGCG CAGGGGAGCG ACAGGATTAGAACAG TERM 2140 1627581 - 1627560 - R 93 -15.9 -3.08046 | overlap 1627559 GGGTTATCCGAAAAT GCTCCCCTG AGCG CAGGGGAGC GACAGGATTAGAACA SeD_A1692 1628578 - 1627589 - | D-lactate dehydrogenase TERM 2141 1628355 - 1628380 + g 74 -2.4 -5.09173 | opp_overlap 1628359, overlap 1628352 TTAAATCCGGCGCAA CGCAGCGCGA TGTATT TCACGCCGTG TTTTTTCAGCTCTTC TERM 2142 1628452 - 1628466 + g 70 -5.6 -4.4715 | overlap 1628453 CTGCTTCACATCCAT TGGCGG TTT TCGCCG TTTTCTCGGTTAGCA TERM 2143 1630686 - 1630675 - g 74 -7.2 -4.07885 | overlap 1630676 CACGGCGTGTTAAAA GGCG GCAG CGCC TGGATGCCGGATAAC TERM 2144 1630718 - 1630706 - g 72 -4.1 -4.77165 | overlap 1630701 TGCCGGATAACAAAA TCAAC GGC GTCGA TTTCATTCTGCCATT TERM 2145 1631353 - 1631363 + G 70 -6.8 -4.0896 | overlap 1631343 1631347 GTGTTTACGCTGTGG CGCA GTT TGCG TTTTGGCGACAATTT TERM 2146 1631414 - 1631400 - g 71 -4.2 -4.63486 | opp_overlap 1631406, overlap 1631402 ATGGCTTGAACAAAA TACAGC GTT GCCGCA ACCTTCTTGCCGGAA SeD_A1693 1628818 - 1631454 + | hypothetical protein SeD_A1694 1631454 - 1631645 + | hypothetical protein SeD_A1695 1631653 - 1631976 + | YdbL SeD_A1696 1632119 - 1632568 + | glutathione-dependent formaldehyde-activating, GFA SeD_A1697 1633170 - 1632565 - | fmn-dependent NADH-azoreductase TERM 2147 1633117 - 1633100 - G 75 -6.3 -4.63932 | overlap 1633102 CATTGTTCAATAAAA TAGTCAG TCAA CTGACCA GACTGAGAGTACCCT hrpA 1633353 - 1637273 + | ATP-dependent helicase HrpA SeD_A1699 1637337 - 1638137 + | protein YdcF TERM 2148 1638168 - 1638141 - f 78 -6.2 -4.62069 | overlap 1638143 GCGTTACGCTAAAAA TCGCCCGTTTGC GAGG GTGAACGGGCAA GTGCGACCACCATCT SeD_A1700 1638254 - 1638784 + | cytochrome B561 TERM 2149 1638909 - 1638876 - T 78 -6.7 -4.61199 | ATTCCATACAGAAAA CGCCTGCGTCT AACCAGGACCCG TGACGCAGGCG AAGGAGGACGGGTCT SeD_A1702 1639717 - 1639055 - | methyltransferase type 12 TERM 2150 1639100 - 1639085 - G 70 -6.8 -4.09243 | opp_overlap 1639085 1639083, overlap 1639087 CATAGTGGCGGAAAA TAGCGC AACG GCGCCA TGTTGCTCCAAAGTC SeD_A1703 1641731 - 1640181 - | putative inner membrane protein TERM 2151 1641297 - 1641310 + g 71 -5.9 -4.23615 | opp_overlap 1641297 TAGCATTCCCATTAA CGCGT ACAT GCGCG TTTCTTGACTGTAAT SeD_A1704 1642548 - 1641868 - | putative ABC-type transport system membrane component SeD_A1705 1643276 - 1642545 - | ABC transporter ATP-binding subunit SeD_A1706 1643948 - 1643301 - | putative ABC transporter permease component TERM 2152 1644158 - 1644137 - H 80 -7.3 -4.72188 | TGAAGGTAAAATAAA CCGGCTCTT CTAT AAAAGCCAG ATCAAGATTGCCATT SeD_A1709 1645623 - 1645967 + | cyanate transport SeD_A1710 1647314 - 1646088 - | secreted effector protein TERM 2153 1646615 - 1646595 - G 77 -3.9 -5.06816 | overlap 1646597 AGCCCCCAATAAAAA TATCGCCAG GTC CTGGTGAGA AGGGGTGTAAGATGC TERM 2154 1646613 - 1646597 - G 70 -6.5 -4.16307 | overlap 1646595 CCCCCAATAAAAATA TCGCCAG GTC CTGGTGA GAAGGGGTGTAAGAT TERM 2155 1646889 - 1646877 - G 84 -6.3 -5.00616 | GCTGTCGCCAAAAAA TACCA GTC TGGTA ATATCACCCAAAGAA TERM 2156 1647230 - 1647245 + g 70 -5.4 -4.42788 | ATAAACTTAATTCCG GAAGGC GTGC GCTTTC TTTTATCGCATTAAA TERM 2157 1647584 - 1647574 - R 75 -3.2 -5.18561 | CAAAGATCTAAAAAA GAAG CCA CTCC TGATTTTAGTGTGCT SeD_A1712 1648600 - 1648445 - | hypothetical protein SeD_A1713 1648620 - 1648745 + | hypothetical protein TERM 2158 1649052 - 1649070 + F 75 -3.2 -5.25803 | GGTATTAAAAATCTT TCAAATAA CGC TCATTTGA TTTTTTGTCCACATT SeD_A1714 1649508 - 1649783 + | putative cytoplasmic protein TERM 2159 1650372 - 1650388 + G 80 -4.3 -4.98531 | opp_overlap 1650356, overlap 1650373 CGCTAAAGTGAAAGC GGGCGAC ACC GTTGCCG TTTTTGGTTTAGGCG SeD_A1715 1649815 - 1650933 + | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase TERM 2160 1650939 - 1650963 + F 100 -15.7 -4.5538 | opp_overlap 1650934, overlap 1650938 1650940 CGATAACTGATTCAT CCGCCAGCGGA TTT TCCGCTGGCGC TTTTCTGAATTTTCT TERM 2161 1650940 - 1650962 + F 100 -19.2 -3.31601 | opp_overlap 1650934, overlap 1650938 1650939 GATAACTGATTCATC CGCCAGCGGA TTT TCCGCTGGCG CTTTTCTGAATTTTC SeD_A1716 1651102 - 1652727 + | methyl-accepting chemotaxis protein III TERM 2162 1652734 - 1652767 + T 100 -15.3 -3.25823 | gap 1, opp_overlap 1652732 1652731, overlap 1652731 1652735 TTCCTTTAATAAGCG TCGCGCCAGCGGGCTA TTT TAGCC-GCGGGCGCGG TTAATGTCCGACAGC TERM 2163 1652735 - 1652766 + T 95 -16.6 -2.55351 | gap 1, opp_overlap 1652732 1652731, overlap 1652731 1652734 TCCTTTAATAAGCGT CGCGCCAGCGGGCTA TTT TAGCC-GCGGGCGCG GTTAATGTCCGACAG SeD_A1717 1653711 - 1652788 - | LysR substrate binding domain protein TERM 2164 1653075 - 1653090 + g 77 -8.2 -4.07568 | GGGCTTCCGCATTCT GGCGCG GTAC CGTGCC TTTTGGCGAGACGAC TERM 2165 1653308 - 1653327 + g 75 -3.5 -4.89233 | overlap 1653309 GTATTGTTCATGGTC GCGACCT GTAACG AGGTCGA TTTTTGCTGTTGATG TERM 2166 1654449 - 1654463 + G 73 -5 -4.66163 | opp_overlap 1654447, overlap 1654448 GGGCGGCGGAAATCT TATCGC AGC GTGATA TTTTTACATCGCGCT SeD_A1718 1654004 - 1655347 + | putative cytoplasmic protein TERM 2167 1656114 - 1656104 - g 81 -2.4 -5.40072 | GTGGCGCTAAAAAAA GGCG TTG CGCT GGCAGAACATCTTGG TERM 2168 1656389 - 1656372 - g 78 -2.5 -5.22039 | opp_overlap 1656374 1656382, overlap 1656373 1656374 GTCAAATTCAAAAAA TGCGCCG TGAG CGGCGTG TTGGCCTGGGGTTAA SeD_A1719 1655396 - 1656904 + | carboxylesterase, type B TERM 2169 1657236 - 1657254 + G 72 -3.8 -4.70319 | CGGAATCCGATATTG CGGATGGT AAA ATTGTCCG TTTTGATTTTGCTGG SeD_A1720 1657160 - 1658779 + | glucans biosynthesis protein D SeD_A1721 1658984 - 1659550 + | YceI family protein SeD_A1722 1659562 - 1660698 + | L-lactate oxidase TERM 2170 1660705 - 1660725 + T 100 -15.5 -4.4084 | opp_overlap 1660705 CCCCAGTAATATAAA GGTCGGGTA CTA TACCCGACC TTTTCCTGTATGATT TERM 2171 1660725 - 1660705 - T 100 -15.5 -4.23674 | opp_overlap 1660705 CCCCAGTAATATAAA GGTCGGGTA CTA TACCCGACC TTTTCCTGTATGATT SeD_A1723 1661182 - 1660745 - | aminoglycoside 6'-N-acetyltransferase Iz SeD_A1724 1661979 - 1661182 - | putative regulatory protein TERM 2172 1661596 - 1661610 + g 83 -7.2 -4.55798 | GTTAGCGATTTTGAT GTCATT GCA AATGAC TTTTACTTTGGCGTC SeD_A1725 1662621 - 1661989 - | protein SgcE SeD_A1726 1663070 - 1662633 - | phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TERM 2173 1663173 - 1663199 + r 100 -11.6 -4.78237 | overlap 1663174 GTTATCGCTCTCTGC AGGGGATAAGCG TTT TGCTTATCCCCA TTTTATTGTCGGATA TERM 2174 1663174 - 1663198 + r 100 -15.1 -3.46219 | overlap 1663173 TTATCGCTCTCTGCA GGGGATAAGCG TTT TGCTTATCCCC ATTTTATTGTCGGAT SeD_A1727 1664008 - 1663202 - | hypothetical protein TERM 2175 1663262 - 1663279 + g 80 -4.7 -5.03715 | opp_overlap 1663262, overlap 1663264 1663265 CGCCTGGTCGACAAA GTTGGCG AAGA CGCCGTC TTTTTTAAACGTGGT SeD_A1728 1665335 - 1664022 - | PTS system, IIc component TERM 2176 1664341 - 1664331 - G 90 -4.6 -5.38047 | CATGCAGATAAAAAA CGGC GCA ACCG GTAAATCAGCCAGCG SeD_A1729 1665627 - 1665346 - | PTS system, Lactose/Cellobiose specific IIB subunit SeD_A1730 1666742 - 1665624 - | putative sgc region protein SgcX TERM 2177 1666092 - 1666079 - G 77 -8.1 -4.08216 | GCACGCGTCGTAAAA CGGGA ACAA TCCCG CGAATATTGAACTCT SeD_A1731 1666959 - 1667498 + | ribosomal-protein-serine acetyltransferase SeD_A1732 1668475 - 1667495 - | hypothetical protein TERM 2178 1668344 - 1668358 + g 79 -11.4 -3.63895 | opp_overlap 1668337 GGCATCAACCCAGCC GCCGGA GGT TCCGGC TTTAACATCGTTAAA TERM 2179 1668594 - 1668583 - g 74 -2.2 -5.06223 | overlap 1668593 ATAAATTAAACAAAA TGCG TAAT CACA AGCAGAGCGATCGCG TERM 2180 1669358 - 1669369 + G 72 -2.2 -4.86621 | ACAACCGTTTAATGC TTCC TTCT GGAG TTTTTCGTTCGGCGT SeD_A1733 1668582 - 1669595 + | tellurite resistance protein TehA tehB 1669582 - 1670178 + | tellurite resistance protein TehB TERM 2181 1670384 - 1670423 + G 87 -13.6 -3.30629 | overlap 1670381 1670385 TACTGGCTTGCTGGC GTTATCCGGCTGTGCGTC TAAA GTCACACAGCCGGATAAG TATTCTGGATTCTTA TERM 2182 1670385 - 1670422 + G 90 -17.1 -2.57654 | overlap 1670384 1670381 ACTGGCTTGCTGGCG TTATCCGGCTGTGCGTC TAAA GTCACACAGCCGGATAA GTATTCTGGATTCTT SeD_A1735 1670334 - 1671002 + | putative lipoprotein SeD_A1736 1672234 - 1671056 - | benzoate transporter TERM 2183 1671359 - 1671349 - G 100 -8.2 -5.72053 | overlap 1671350 CAAGTAAATAAAAAA CGCC TGC GGCG GCGGCCGCTAACCAG TERM 2184 1671462 - 1671451 - G 79 -7.2 -4.42974 | overlap 1671458 TGCAGATAGAATAAA CGCC AAAT GGCG AAAGCAGCAGCGCCA TERM 2185 1671544 - 1671554 + g 77 -8.2 -4.14243 | CCTTCATTGTGGCGA CGCC GGG GGCG TTTTGCGATGCCATC SeD_A1737 1672305 - 1672862 + | transcriptional regulator, XRE family TERM 2186 1673000 - 1673010 + G 70 -6.8 -4.18018 | TGACGCCGCAATTGC TCGC GAA GCGA TTTTGCATGGCGCAG TERM 2187 1673771 - 1673785 + G 100 -4.2 -5.8187 | GGCGCGTGCATCGGT TGGTCG GAC CGAGCA TTTTTTTGTTCCCTC SeD_A1738 1672941 - 1674905 + | peptidase, U32 family SeD_A1739 1675136 - 1674906 - | hypothetical protein SeD_A1740 1676360 - 1675410 - | secreted effector protein TERM 2188 1676450 - 1676465 + H 76 -4 -5.05505 | gap 1, overlap 1676452 CCATCGGTTTGCCTA TC-GGTG AAA CACCTGA TTTTTGCTTTGTCCT SeD_A1741 1676889 - 1677287 + | hypothetical protein TERM 2189 1678183 - 1678171 - g 77 -4.1 -5.05577 | AAACCAAATGAAAAA CGAAT TTT ATCCG CAGGTAGAGAAAAAT SeD_A1742 1677809 - 1678579 + | periplasmic dipeptidase SeD_A1743 1678715 - 1680139 + | aminotransferase, classes I and II superfamily SeD_A1744 1680254 - 1681699 + | gamma-aminobutyraldehyde dehydrogenase TERM 2190 1681782 - 1681734 - f 100 -8.8 -5.25656 | gap 1, overlap 1681736 1681737 AAAATCATGAAAAAA TA-GGCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCAGCA AGTACTCAAAGGTTG TERM 2191 1681779 - 1681736 - f 100 -15.2 -4.23218 | overlap 1681734 1681737 AATCATGAAAAAATA GGCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCA GCAAGTACTCAAAGG TERM 2192 1681778 - 1681737 - f 100 -18.7 -3.12304 | overlap 1681736 1681734 ATCATGAAAAAATAG GCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGC AGCAAGTACTCAAAG TERM 2193 1682063 - 1682051 - f 81 -3.3 -5.27335 | TGTGTCAAATAAAAA GAGCA TAT TGCGC GCGTTTTTTCCTCTG SeD_A1745 1682098 - 1682271 + | putative inner membrane protein TERM 2194 1682274 - 1682302 + T 72 -5.2 -4.57073 | overlap 1682275 1682278 TTCGCTTTTCTGACC TCAAGCCCGATA CAGGT TACCGGGCATGG TTTTTCCGCCAGGTC SeD_A1746 1684460 - 1682316 - | putative virulence effector protein TERM 2195 1683590 - 1683566 - G 73 -9.2 -3.82098 | opp_overlap 1683566 GAGAATCAAGCGAAA GGCTGACCGC ATTGA GCAGTCGGCC TTCCTTAACCGGATG TERM 2196 1683718 - 1683730 + g 86 -10.5 -4.16284 | GGCGCCGCCAGTTCC CCGGC ATG GCCGG TTTGTTGCAACATAT SeD_A1747 1687438 - 1684457 - | virulence protein SrfB TERM 2197 1684656 - 1684671 + g 70 -6.8 -4.11484 | CGCACATTCAGTACG CCGTCG CCAG CGATGG TTTTCGCCAGTTCGG TERM 2198 1686899 - 1686881 - G 74 -6.6 -4.23213 | GGCATACTGAAGAAA CGACTCGC GCA GCCAGCCG TCAATCCATGTCTGG SeD_A1748 1688771 - 1687443 - | ssrAB activated gene TERM 2199 1688030 - 1688020 - G 78 -2.4 -5.252 | overlap 1688022 GATGGCCAGAAAAAA GGCG TGG CGAC GGCGGCGATAACCAC TERM 2200 1688224 - 1688238 + g 73 -5.6 -4.64676 | opp_overlap 1688221 1688220 GCCTGACTAAATGCC GCCTCT ACC AGCGGC TTTTCTTCGGGCTCC SeD_A1749 1688995 - 1689228 + | putative cytoplasmic protein TERM 2201 1689267 - 1689239 - T 72 -6.6 -4.30978 | overlap 1689240 TGTAACCCATTAAAA CTGGCGCTTCGC AATCA GCCATGCGCCAA TGACCAGCAACAGCG SeD_A1750 1689682 - 1689233 - | inner membrane protein YdcZ TERM 2202 1689462 - 1689440 - G 100 -6.3 -5.56264 | gap 1, overlap 1689443 GGCAAATACAAAAAA TGA-CCCCAG CAGA CCGGGGATCA ATGTCCACCAGCGAA yncA 1690197 - 1689682 - | phosphinothricin acetyltransferase SeD_A1752 1690409 - 1691446 + | putative NADP-dependent oxidoreductase yncb TERM 2203 1691473 - 1691455 - f 100 -8.8 -5.63517 | TGCGTAAAGAAAAAA TGGCGGCA TTA TGTCGCCA TAAAAATGTGCAAAT TERM 2204 1692413 - 1692397 - g 71 -9.5 -3.48924 | CCACTGCCTACAGAA CGTTTTG CAA CAAAACG TAGCGACGATTAAAA SeD_A1753 1691780 - 1692445 + | transcriptional regulator, GntR family TERM 2205 1692493 - 1692467 - T 100 -15.2 -3.26473 | opp_overlap 1692463 1692460 1692473, overlap 1692468 1692471 TGAAACTATGACTAA TCAATAGCGGGG ATG CCCCGCTATTGC CGGATATTTATTCAA TERM 2206 1692492 - 1692468 - T 100 -18.7 -2.55402 | opp_overlap 1692463 1692460 1692473, overlap 1692467 1692471 GAAACTATGACTAAT CAATAGCGGGG ATG CCCCGCTATTG CCGGATATTTATTCA TERM 2207 1692489 - 1692471 - T 93 -14.6 -3.41961 | opp_overlap 1692463 1692460 1692473, overlap 1692468 1692467 ACTATGACTAATCAA TAGCGGGG ATG CCCCGCTA TTGCCGGATATTTAT TERM 2208 1692473 - 1692487 + T 80 -12.8 -3.04515 | opp_overlap 1692471 1692468 1692467, overlap 1692463 1692460 TATGACTAATCAATA GCGGGG ATG CCCCGC TATTGCCGGATATTT SeD_A1754 1694666 - 1692501 - | probable TonB-dependent receptor yncD TERM 2209 1692954 - 1692970 + g 74 -7.2 -4.10855 | overlap 1692955 1692963 1692967 GTCCAACGCGAGCTC TGCGCC CTGGC GGCGCG TTTTGCCCGCGTTTT TERM 2210 1692967 - 1692981 + g 77 -4.2 -4.88736 | overlap 1692955 1692954 1692963 TCTGCGCCCTGGCGG CGCG TTTTGCC CGCG TTTTTGTAGGTAGTG TERM 2211 1693633 - 1693646 + g 81 -8.1 -4.2349 | AGTGTAATTACGCCG CCAGC CTGG GCTGG TTTTAGCTGTGCCAC TERM 2212 1693932 - 1693947 + g 82 -5.4 -5.00616 | overlap 1693934 AAGGCGCACGCCCAG TTTGGC ATTA GCCAGA TTTTTTCGCGCGCCG TERM 2213 1694909 - 1694922 + G 71 -5.9 -4.33582 | overlap 1694907 CGTCATCTTTTTTCG CCGCG CCTG CGTGG TTCTTTATTGTTAGG SeD_A1755 1694885 - 1695946 + | hypothetical protein SeD_A1756 1696091 - 1696312 + | hypothetical protein TERM 2214 1696377 - 1696354 - T 100 -14.6 -3.74747 | gap 1 GCAACGCGCATTAAA CCCGGCAGGCC TGG GGC-TGCCGGG GAAGGGGAATGTTAT SeD_A1757 1697882 - 1696389 - | L-asparagine permease SeD_A1758 1698036 - 1698173 + | hypothetical protein SeD_A1759 1698395 - 1699027 + | putative cytoplasmic protein TERM 2215 1699122 - 1699088 - f 82 -7.8 -4.56775 | opp_overlap 1699076 1699074, overlap 1699096 AGCCGGCGTTAAAAA TTTTAACACGCCGCTA TTT TGGCGGCGTGTCGCAA AGAGATTCTCAGAAC TERM 2216 1699114 - 1699096 - f 74 -10.2 -3.17553 | opp_overlap 1699076 1699074, overlap 1699088 TTAAAAATTTTAACA CGCCGCTA TTT TGGCGGCG TGTCGCAAAGAGATT TERM 2217 1699181 - 1699195 + F 74 -5.7 -4.61482 | overlap 1699173 1699176 ACGTACCTCCGGCGC GACAG CCGGC CTGTC TTATTTTTTCAAAAG SeD_A1760 1699310 - 1700155 + | N-acetyltransferase family protein SeD_A1761 1701084 - 1700191 - | phenazine biosynthesis PhzC/PhzF protein TERM 2218 1701116 - 1701149 + r 79 -2.9 -5.27335 | opp_overlap 1701117, overlap 1701117 CTGAAGAATCATCAT AGCCTGTGCGTTGCC GAAT GACGACGCCCAGACG TTTTTCTTTGCCCGG narV 1701870 - 1701190 - | respiratory nitrate reductase 2, gamma subunit narW 1702562 - 1701867 - | nitrate reductase molybdenum cofactor assembly chaperone 2 narY 1704106 - 1702562 - | nitrate reductase 2, beta subunit TERM 2219 1703140 - 1703150 + g 70 -6.8 -4.09685 | GCGACCGTTGGGCAG CGTC GAT GACG TTTTGCGGGATGCCC TERM 2220 1703930 - 1703942 + g 71 -4.8 -4.62069 | GCCTTGCCACTCCTG CTGG TCTTC CCAG TTTTTGGGATAGCCG TERM 2221 1704009 - 1704023 + g 73 -5.6 -4.59773 | TATTCCATCCCTTCA CGTCCG GTC CAGACG TTTTTACAGGTGACG SeD_A1765 1707843 - 1704103 - | nitrate reductase, alpha subunit TERM 2222 1704795 - 1704824 + g 84 -13.7 -3.08776 | gap 1, overlap 1704791 AAGAGACATGCTCGC TTTCCAGCCCTGAC CAG GTC-GGGCTGGAGA TAATTTTGCGCGGTT TERM 2223 1707337 - 1707351 + g 74 -10 -3.66178 | opp_overlap 1707339 GTTAGCAGCGGCAAT GAGCTG ATT CAGCTC TTTCCAGTTCGAACG TERM 2224 1707557 - 1707576 + g 100 -16.4 -3.2827 | CAGGAGTAGCTGGCG CCGCGCGG GCAG CCGCGCGG TTCATGGTTCGGTAA SeD_A1766 1709335 - 1707935 - | nitrite extrusion protein 2 TERM 2225 1708143 - 1708110 - G 73 -5.1 -4.54449 | gap 1, overlap 1708111 ATAGCGGAGATAAAA CCGAGCGCGGCGGCGG TAT CCGTCACCGCT-TCGC GCTGCGCCTGCTCAT TERM 2226 1708949 - 1708934 - G 76 -9 -3.99592 | AGCGATGAGCATAAA TACCCC GAAA GGGGTA GCAGGATTTTGCACG TERM 2227 1709375 - 1709389 + r 73 -7.8 -4.12599 | opp_overlap 1709371 1709373 1709375 CACATAAAAGAGACA GAGCGT CAC GCGCTC TTTTGAGAACTTATT SeD_A1767 1710116 - 1709538 - | transcriptional regulator, TetR family TERM 2228 1711402 - 1711386 - g 93 -9.3 -4.82901 | GCGCCGGCAGAAAAA GCGGCGG CGG CCGGCGC GATAGAAACGATGGC SeD_A1768 1710234 - 1711721 + | methyl viologen resistance protein SmvA SeD_A1769 1712186 - 1711746 - | glutathione-dependent formaldehyde-activating, GFA TERM 2229 1712226 - 1712246 + r 91 -11.1 -4.19624 | opp_overlap 1712226 ACATCAAGAGAAAAA GCCAGCCCT GAA AGGACTGGC TTTGTATTCAGACTA TERM 2230 1712246 - 1712226 - R 100 -13.3 -5.13344 | opp_overlap 1712226 ACATCAAGAGAAAAA GCCAGCCCT GAA AGGACTGGC TTTGTATTCAGACTA SeD_A1770 1713358 - 1712270 - | outer membrane porin protein LC TERM 2231 1712815 - 1712828 + g 71 -4.5 -4.63527 | gap 1, overlap 1712809 1712805 CGTTAGACTCGTACG CG-CCG TCA CGGTCG TTTTTGCCCTGGTAC SeD_A1771 1714804 - 1713881 - | inner membrane protein YddG TERM 2232 1718179 - 1718145 - g 74 -7.9 -4.15222 | gap 1, opp_overlap 1718153, overlap 1718146 ACGGTCCGCAACAAA CGCCATCACGCCGCCT CCGC AGGCG-CGTGATTACA AAGCCGAAGTCGCGA TERM 2233 1718903 - 1718863 - g 77 -11.2 -3.55801 | gap 1, opp_overlap 1718854 1718863 1718880, overlap 1718875 ATCAATCTGTGGAAA GGGGCGCTAAAA-CCGCTG GCCG CAGCGGGCTTTATCGCCAC TTTCGCCGGTCTGAT TERM 2234 1718890 - 1718875 - g 86 -10.4 -4.0896 | opp_overlap 1718863 1718854 1718880, overlap 1718863 AAAGGGGCGCTAAAA CCGCTG GCCG CAGCGG GCTTTATCGCCACTT fdnH 1718101 - 1718985 + | formate dehydrogenase, nitrate-inducible, iron-sulfur subunit SeD_A1775 1718978 - 1719634 + | formate dehydrogenase, gamma subunit TERM 2235 1719648 - 1719686 + T 87 -14.9 -2.91511 | gap 1, opp_overlap 1719655 1719658, overlap 1719655 AATTCTTTCGCAATC TGATAAACAAGGCGCTAT CCTG GTAGCGCCTTGTTT-TCA TCTGCTGTCTGTATA TERM 2236 1719680 - 1719655 - T 95 -13.4 -3.92522 | opp_overlap 1719648 1719655, overlap 1719658 TCGCAATCTGATAAA CAAGGCGCTA TCCTGG TAGCGCCTTG TTTTCATCTGCTGTC TERM 2237 1719655 - 1719680 + T 100 -14.1 -4.38171 | opp_overlap 1719655 1719658, overlap 1719648 TCGCAATCTGATAAA CAAGGCGCTAT CCTG GTAGCGCCTTG TTTTCATCTGCTGTC TERM 2238 1719677 - 1719658 - T 79 -9.3 -4.08948 | opp_overlap 1719655 1719648, overlap 1719655 CAATCTGATAAACAA GGCGCTA TCCTGG TAGCGCC TTGTTTTCATCTGCT SeD_A1776 1720735 - 1719725 - | alcohol dehydrogenase, propanol-preferring TERM 2239 1720039 - 1720059 + g 79 -3.2 -5.14563 | gap 1, opp_overlap 1720039 CGACCGCGGTAACCA CCGCT-GCG TGCG CGCCACCGG TTTTTTCCTGCACAA TERM 2240 1720502 - 1720484 - G 85 -8.8 -4.37886 | opp_overlap 1720494 1720494, overlap 1720485 GCATCCTTCATAAAA CCACGCGA CAC TCGCGCGA TCGCCGGGTTTCAGC TERM 2241 1720576 - 1720601 + g 75 -6.1 -4.64766 | CGTGTCCCAGAATGA CGCCGGTTTTG TCAC CGAAATCGCCG TTTTTCACGTGTAGA TERM 2242 1720772 - 1720798 + r 73 -9.6 -3.41936 | opp_overlap 1720772 1720777 1720782, overlap 1720770 GTGAACTGCATAGCA GGTAATAGCA GGTAAGG TGCTATTACC TCTTTAGGATTAATA TERM 2243 1721014 - 1720984 - R 74 -3.9 -5.03961 | gap 1, opp_overlap 1720984, overlap 1720985 1720987 AACTAAAGAAGAAAA TGATATCCGGCGGC ATTC ACCGCCGGGTA-CG TATTAAATGGAAGTC TERM 2244 1721012 - 1720987 - R 79 -11.1 -3.35275 | opp_overlap 1720984, overlap 1720985 1720984 TAAAGAAGAAAATGA TATCCGGCGGC ATTC ACCGCCGGGTA CGTATTAAATGGAAG SeD_A1777 1722714 - 1721017 - | NAD-dependent malic enzyme TERM 2245 1721734 - 1721721 - G 72 -2.3 -4.9218 | opp_overlap 1721726 GATCGACCATAAAAA CGTTC TGTC GAGCG GCATCTTCGCTTAAA TERM 2246 1722843 - 1722864 + r 90 -13.1 -3.65353 | opp_overlap 1722843, overlap 1722860 TCCTATAAACAAAAA CACCATTGC AGAT GCAATGGTG TTTAACGTCATTTCA TERM 2247 1722864 - 1722843 - R 100 -13.1 -5.38054 | opp_overlap 1722843 1722860 TCCTATAAACAAAAA CACCATTGC AGAT GCAATGGTG TTTAACGTCATTTCA SeD_A1778 1723034 - 1722891 - | 30S ribosomal protein, S22 family SeD_A1779 1723344 - 1723129 - | protein bdm SeD_A1780 1723857 - 1724288 + | peroxiredoxin OsmC TERM 2248 1724402 - 1724422 + F 83 -13.3 -3.27951 | overlap 1724400 1724405 CTATCACCTCAACGC GCCGTAGAC CAC GTCTGCGGC TATTGTCGTGGCCTA SeD_A1781 1724638 - 1724967 + | protein HdeB TERM 2249 1725496 - 1725479 - g 95 -6.3 -5.31275 | gap 1, overlap 1725481 CCCGAGGAGAAAAAA CT-GTGGC ACA GCCACCAG TACGAGGTGAAATCC SeD_A1782 1725110 - 1725895 + | hypothetical protein TERM 2250 1727172 - 1727153 - g 71 -4.3 -4.56597 | gap 1, opp_overlap 1727153 1727159, overlap 1727154 1727156 CTCGCGGCGTAAAAA GTACCGGA CAACC TCCGGT-C GCCTTTGTGGATTTT TERM 2251 1727320 - 1727347 + G 100 -7 -5.77853 | CTGCTTTTTATGGGC GAAGAGTATGGC GAAA GCCGTCCTTTTC TTTTTTTTACCGATT treZ 1726024 - 1727808 + | malto-oligosyltrehalose trehalohydrolase TERM 2252 1728109 - 1728098 - g 74 -7.2 -4.07885 | opp_overlap 1728107 CAGCTCGCTGGAAAA CGCC TGGT GGCG CGACGTGCTTGAATA TERM 2253 1728166 - 1728187 + G 77 -3.5 -5.00616 | overlap 1728170 ATTTCGATATTGACT GGTCGCGCC GACT GACGCTGCC TTTTTTAGGCGACAC TERM 2254 1728496 - 1728484 - g 73 -5.5 -4.66537 | opp_overlap 1728492, overlap 1728485 GGGTGGAAGATAAAA CCGTC TTC GACGA TACACATCGGCTGAT TERM 2255 1728664 - 1728646 - g 80 -4.5 -5.02074 | opp_overlap 1728646, overlap 1728648 TCACCGTGGAAAAAA TTCTCGC TAAAG GCGAGCA ACTTCCTGATGACTG treY 1727805 - 1730333 + | malto-oligosyltrehalose synthase glgX 1730390 - 1732465 + | glycogen debranching enzyme GlgX TERM 2256 1732507 - 1732491 - T 73 -10.8 -3.05384 | opp_overlap 1732491 GCGCTCCGGACCCAA CCGGCC TTGAT GGCCGG TTTTTTACTGGCGCT TERM 2257 1732491 - 1732507 + T 100 -10.8 -5.14965 | opp_overlap 1732491 GCGCTCCGGACCCAA CCGGCC TTGAT GGCCGG TTTTTTACTGGCGCT SeD_A1786 1733780 - 1732578 - | aminotransferase class I and II TERM 2258 1733654 - 1733631 - G 76 -11.8 -3.05596 | gap 1 GATTCGCTGATGCAA TG-CCGCCTGA ACC TCAGGCGGGCA GGCAAAATCGAAATC nhaC 1735244 - 1733793 - | Na+/H+ antiporter NhaC SeD_A1788 1736395 - 1735388 - | HTH-type transcriptional regulator GalR TERM 2259 1736369 - 1736381 + g 77 -7.7 -4.31433 | TGATACACCGGCCAT GGATG CAA CATCC TTTATTGTCGCCATG SeD_A1789 1736626 - 1736907 + | hypothetical protein TERM 2260 1736939 - 1736955 + T 100 -10.1 -5.64274 | opp_overlap 1736939 AACCTGCGCGACGAA CCGGTCA CAG TGGCCGG TTTTTTTATGCCTGC TERM 2261 1737059 - 1737073 + T 72 -2.8 -5.0538 | opp_overlap 1737059 AGGGAAGGGATCAAA CTTATG GGC CAGAAG TTTTTTGACATACAC SeD_A1790 1737384 - 1737196 - | hypothetical protein SeD_A1791 1737549 - 1737848 + | major facilitator superfamily MFS_1 TERM 2262 1737863 - 1737849 - f 76 -8.6 -4.06866 | CCAGAAACAGAATAA TGTGAC AAC GTCACA AACATTATTGTTCCC TERM 2263 1738485 - 1738473 - g 84 -3.3 -5.32882 | CAGGATGATAAAAAA CCACT GAA AGAGG ACGAGAGCGTTTCCC pqaA 1737984 - 1739474 + | PqaA protein TERM 2264 1739534 - 1739505 - f 95 -13.1 -3.9392 | opp_overlap 1739504 TCTGATTTTAAATAA TTTTATCCATCAC GCTT GCGATGGATAAAA ATCCTCTGCGATAAA TERM 2265 1739638 - 1739610 - f 87 -9.8 -4.26634 | gap 1 AAAATAACCTTAAAA TATTGTGGTC-AG GCCG CTAGACCACAATA AGAGGATTAATCATG SeD_A1793 1739651 - 1740937 + | membrane transport protein TERM 2266 1741727 - 1741714 - gT 77 -8.1 -4.07678 | overlap 1741707 GGCCAAAACAGGAAA CGTCG CTGC CGACG AACCTGATCACCTAT SeD_A1794 1740912 - 1741937 + | zinc-type alcohol dehydrogenase TERM 2267 1741952 - 1741979 + T 95 -13.5 -3.90744 | overlap 1741954 ATTTACGGCGAGTTC TACCGCATGGC ATATCC GCCATGCGGTG TTATTTACCGACAAA TERM 2268 1741954 - 1741977 + T 93 -13.9 -3.54488 | overlap 1741952 TTACGGCGAGTTCTA CCGCATGGC ATATCC GCCATGCGG TGTTATTTACCGACA SeD_A1795 1742667 - 1741996 - | putative regulatory protein TERM 2269 1742328 - 1742347 + g 70 -5 -4.38712 | overlap 1742326 1742329 TCGCCTCTATTTGGT TGATGACG TCAA CGTTATCG TTTTGTGCGGCTAAG SeD_A1796 1743924 - 1742833 - | choloylglycine hydrolase TERM 2270 1743091 - 1743121 + g 75 -11.8 -2.98719 | TGCAAGCGTATTCAT TGCGTCGTGGGCGG ATG TCGCTTGCGGCGCA TATGTGGTGTAATAA TERM 2271 1743430 - 1743412 - G 76 -8.9 -3.922 | AAACGCGTAATGAAA TGGCGAT TTCAG ATCGCCA AACCGATGCAGTTCC TERM 2272 1743516 - 1743503 - G 71 -5.9 -4.33274 | opp_overlap 1743503 1743504, overlap 1743504 CCGACAGTAGCAAAA CGGGC CAGC GCCCA TTCTCCCAACGAGGT TERM 2273 1743717 - 1743728 + g 91 -3.6 -5.61596 | overlap 1743715 AGCTTATCCCCTGGC TGCC ATCC GGCG TTTTTTTATCAAACT TERM 2274 1744578 - 1744592 + G 73 -5.7 -4.45517 | GCTCTGCGCACCCGT TGGCA AAAGA TGCCA TTTTGTCGCTCATTT TERM 2275 1744798 - 1744787 - g 77 -7.2 -4.3208 | opp_overlap 1744787, overlap 1744788 CTGGAGAAGTTAAAA CGCG TCAG CGCG GATGCTAAAGCGATT SeD_A1797 1744352 - 1745455 + | uptake hydrogenase small subunit TERM 2276 1746274 - 1746256 - gf 72 -3.8 -4.68593 | opp_overlap 1746261 TCCATCATCCAAAAA GCTCGC CAGTTCT GCGAAC AGGTTTATCTTCCGG TERM 2277 1746261 - 1746277 + GF 70 -6.5 -4.1891 | opp_overlap 1746256 CATCCAAAAAGCTCG CCAGTTC TGC GAACAGG TTTATCTTCCGGACG SeD_A1798 1745458 - 1747260 + | [Ni/Fe] hydrogenase, large subunit TERM 2278 1747594 - 1747614 + GF 100 -7.6 -5.14563 | CTGGCGCAAAGGCGT TATCAGCG AAATC CGCTGGTA TTTTTTCCTCGAAAA cybH 1747211 - 1747954 + | Ni/Fe-hydrogenase, B-type cytochrome subunit hybD 1747960 - 1748568 + | hydrogenase expression/formation protein hypC 1748568 - 1748867 + | hydrogenase assembly chaperone HypC/HupF SeD_A1802 1748864 - 1749274 + | hydrogenase-1 operon protein HyaE2 SeD_A1803 1749292 - 1750353 + | hydrogenase-1 operon protein HyaF2 SeD_A1804 1750341 - 1751228 + | putative dehydrogenase protein hypA 1751241 - 1751582 + | hydrogenase nickel insertion protein HypA TERM 2279 1751621 - 1751605 - T 100 -10.1 -5.49234 | ATAGGCAATAAAAAA GGACGCC AGA AGCGTCC TGAAATAATAAAAGA SeD_A1806 1752841 - 1751723 - | outer membrane protein N TERM 2280 1751775 - 1751788 + g 70 -6.7 -4.11751 | TCTGTATTAGGATTC GATGG GTTG CCATC TTTTAGCAGATTGAT SeD_A1807 1753573 - 1754100 + | putative outer membrane protein TERM 2281 1754120 - 1754142 + T 73 -10.6 -3.01924 | TGCTCTTCAGGTTAT GGCGCAGA TGAACAT TCTGCGCC TGTTAAGACAAACTC SeD_A1809 1755683 - 1755324 - | putative cytoplasmic protein TERM 2282 1755649 - 1755628 - G 86 -10.1 -4.3467 | overlap 1755639 ATCCCGAGACGAAAA CGCGAACGA AATG TCGATCGCG CCAGGCGGGCAAAGA SeD_A1810 1756609 - 1755683 - | thermolabile glutaminase SeD_A1811 1758070 - 1756682 - | aldehyde dehydrogenase (NAD) family protein SeD_A1812 1758173 - 1759045 + | putative LysR substrate binding domain protein TERM 2283 1759657 - 1759667 + G 74 -2.4 -5.0538 | GTCAGTATTTTGGCT GGCG CAC CACC TTTTTTGCCATCGGC SeD_A1813 1759161 - 1760351 + | sugar efflux transporter B TERM 2284 1760393 - 1760352 - T 77 -10.9 -3.20367 | opp_overlap 1760352 1760364, overlap 1760354 1760356 GAACAACCGCATTAA GACATTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAAAATG CGCCTTAGTGGTACG TERM 2285 1760391 - 1760354 - T 83 -13.5 -3.15841 | opp_overlap 1760352 1760364, overlap 1760352 1760356 ACAACCGCATTAAGA CATTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAAAA TGCGCCTTAGTGGTA TERM 2286 1760389 - 1760356 - T 100 -18.3 -3.13639 | opp_overlap 1760352 1760364, overlap 1760354 1760352 AACCGCATTAAGACA TTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAA AATGCGCCTTAGTGG SeD_A1814 1761063 - 1760398 - | hypothetical protein marR 1761322 - 1761756 + | multiple antibiotic resistance protein MarR SeD_A1816 1761776 - 1762159 + | multiple antibiotic resistance protein MarA SeD_A1817 1762188 - 1762403 + | hypothetical protein TERM 2287 1762410 - 1762428 + T 100 -12.4 -5.52986 | CACCTTTAACCTCTT TGCCCCGT TTT GCGGGGCA TTTTTTTAGTACCGT SeD_A1818 1763424 - 1762522 - | probable amino-acid metabolite efflux pump TERM 2288 1764302 - 1764322 + H 76 -8.9 -3.71265 | overlap 1764316 GCTTTCGGCATTTCT GGCCTCCTT TGT GGGGGGGCC TTTGCGTCCTGTATT TERM 2289 1764484 - 1764496 + H 77 -3.3 -5.24129 | TCGACCAATGATGAC GACCG GCA CCGTC TTTTTTATCGCCGGG SeD_A1821 1765059 - 1765181 + | hypothetical protein TERM 2290 1765207 - 1765241 + T 100 -16.5 -4.55287 | gap 1, opp_overlap 1765196 1765195, overlap 1765208 TAATCCCTCGCAGAG CCGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCGC TTTTGTCTGGATGGC TERM 2291 1765208 - 1765240 + T 100 -20 -3.3269 | gap 1, opp_overlap 1765196 1765195, overlap 1765207 AATCCCTCGCAGAGC CGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCG CTTTTGTCTGGATGG TERM 2292 1765287 - 1765270 - T 100 -10.5 -6.11644 | opp_overlap 1765277 GCAGGCAAAAAAAAA CCGCCGG TTCA CCAGCGG TAAATGCTTGCATGG SeD_A1822 1765921 - 1765529 - | hypothetical protein TERM 2293 1765819 - 1765840 + g 85 -2.1 -5.52384 | opp_overlap 1765803, overlap 1765825 CATCCTCAATAGCAT GAGGCGGCG GCGG TGCCACGTC TTTTTTTAATCCCCC SeD_A1823 1766349 - 1766876 + | competence damage-inducible protein A TERM 2294 1766946 - 1766928 - T 100 -12.4 -5.88565 | opp_overlap 1766925 1766928 GTCAGAATAAAAAAA TGCGAGCC TAT GGCCCGCA TCGTATATGCAATAT TERM 2295 1766928 - 1766946 + T 71 -10.2 -2.69977 | opp_overlap 1766928, overlap 1766925 GTCAGAATAAAAAAA TGCGAGCC TAT GGCCCGCA TCGTATATGCAATAT SeD_A1824 1767178 - 1766996 - | hypothetical protein TERM 2296 1767022 - 1767040 + g 82 -5.2 -5.03145 | overlap 1767015 1767017 1767023 ATTTCCGTCCGCCAC TGTGGCTA TTC TGGCCACC TTTTTTACCCGCTTC SeD_A1825 1768412 - 1767330 - | peptidyl-dipeptidase dcp SeD_A1826 1768551 - 1769297 + | NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg SeD_A1827 1769427 - 1770113 + | transcriptional regulator, GntR family SeD_A1828 1770294 - 1770497 + | hypothetical protein TERM 2297 1770528 - 1770554 + TF 73 -10.8 -3.10901 | overlap 1770526 1770530 GGAACCGTTCCGGCC TTCCCGGTAGCA TAA TGCTACCGGGTC TCTGTTACGCTATTT TERM 2298 1770530 - 1770552 + TF 100 -17.8 -3.10513 | overlap 1770528 1770526 AACCGTTCCGGCCTT CCCGGTAGCA TAA TGCTACCGGG TCTCTGTTACGCTAT SeD_A1830 1772030 - 1770564 - | D-mannonate oxidoreductase SeD_A1829 1772006 - 1772119 + | hypothetical protein TERM 2299 1772170 - 1772116 - TR 100 -10.2 -4.99947 | gap 3, overlap 1772120 GCTAATTAAACAAAA GTGACCGGGCAGCATGGCCGAAACCGC ATTA GCG-TTCCGGCCATACCGC-CAA-CAC GATTTAACTCGTCTG TERM 2300 1772168 - 1772120 - TR 74 -11 -2.8949 | gap 1, overlap 1772116 ATTAAACAAAAGTGA CCGGGCAGCATGGCCGAAACCGC ATTA GCG-TTCCGGCCATACCGCCAAC ACGATTTAACTCGTC SeD_A1831 1773514 - 1772174 - | inner membrane metabolite transport protein YdfJ TERM 2301 1773373 - 1773332 - G 72 -2.1 -4.91852 | opp_overlap 1773335, overlap 1773358 1773368 TTTACCAAAAACAAA GGCGCCGATAATTCTGGCT ATAT AACCTGCACCATAGGTGCC CATTGCCAGAATAAG SeD_A1834 1775851 - 1774637 - | starvation sensing protein RspA TERM 2302 1775259 - 1775241 - G 74 -6.6 -4.26344 | overlap 1775246 1775250 AGATGTTCATTAAAA CCGAACGT ATT ACGCACGG CGTCAAACAGCTTTG TERM 2303 1775319 - 1775329 + g 81 -8.2 -4.3739 | overlap 1775317 CACAATTGTTCTTCC GGCC ACT GGCC TTTTGTCGCGGGCTC TERM 2304 1775965 - 1775933 - R 84 -8.3 -4.67755 | ATATTGATGCAAAAA GCGCTGCCAGATCAC AAA ATGTTCTGGTCGCGC GGCAATGTTACGTAC SeD_A1835 1776299 - 1775973 - | membrane protein YnfA SeD_A1836 1776452 - 1776793 + | protein YnfB TERM 2305 1777021 - 1776979 - g 76 -9.4 -3.96624 | overlap 1777000 GATCTCTACGACAAA CACATCC-ACGACCAAAGCG AACGG CGCTTTG-TCGTCGAATGCG ATGGTGAAAACGCCG TERM 2306 1777140 - 1777120 - g 77 -8.1 -4.21908 | GAGTACCAGGGAAAA GGCCTGGCG TCA CGCGCGGCC AAACTGGCGATGGAT speG 1776829 - 1777389 + | diamine N-acetyltransferase TERM 2307 1777403 - 1777376 - T 71 -10.5 -2.72144 | opp_overlap 1777391 1777391, overlap 1777375 1777391 CTACGCTCCTGAAAC CCACCGCGCAG TAAACG CGGCGCGGTAG TCACGGAGAGTCGCA SeD_A1838 1778140 - 1777430 - | lipoprotein YnfC SeD_A1839 1778247 - 1778552 + | putative outer membrane protein TERM 2308 1779173 - 1779155 - g 73 -5.3 -4.59773 | gap 1, opp_overlap 1779170, overlap 1779157 CGCCAGCCTGAAAAA GACCGTAG AGAC CTACGG-C AATGAAGCCGTTTAT TERM 2309 1779172 - 1779157 - g 73 -9 -3.91506 | opp_overlap 1779170, overlap 1779155 CCAGCCTGAAAAAGA CCGTAG AGAC CTACGG CAATGAAGCCGTTTA SeD_A1840 1778709 - 1781147 + | anaerobic dimethyl sulfoxide reductase chain a TERM 2310 1783110 - 1783097 - g 93 -4.5 -5.45652 | overlap 1783077 ATTTTCAAGAAAAAA TGCCC GGAG GAGCA CTACGTCGCTTTCCG TERM 2311 1783527 - 1783499 - g 74 -7.3 -4.08767 | CTCATTCTGGCAAAA GTCACGCCGCGCA TAT TGCCTGGCGTCAC CGCTATCGGCCAGGG SeD_A1841 1781246 - 1783681 + | anaerobic dimethyl sulfoxide reductase chain a dmsB_1 1783692 - 1784309 + | anaerobic dimethyl sulfoxide reductase, B subunit TERM 2312 1784442 - 1784454 + G 95 -5.5 -5.38047 | CGCCCGTCAGCGCAT CGTGC GTA GCATG TTTTTTCTGTGGCTG dmsC 1784311 - 1785168 + | dmso reductase anchor subunit TERM 2313 1785175 - 1785194 + F 72 -9.2 -3.6512 | opp_overlap 1785173, overlap 1785176 1785186 1785187 GCAGGTTAATTTATG CGTGCGGG GCGA CCCGCACC TTTCGGGATTGTTTG TERM 2314 1785176 - 1785193 + F 79 -12.7 -2.78349 | opp_overlap 1785173, overlap 1785175 1785186 1785187 CAGGTTAATTTATGC GTGCGGG GCGA CCCGCAC CTTTCGGGATTGTTT TERM 2315 1785248 - 1785270 + G 72 -2.6 -4.89477 | overlap 1785251 ATGATTTTTCAGTAA CGGCGCGT GTTCTTG GCGCGTTG TTTTATTATTCGCCG TERM 2316 1785600 - 1785576 - g 70 -2.8 -4.75309 | opp_overlap 1785576 1785596, overlap 1785571 1785567 TGAAATGCAACAAAA CGAGCCAGAA GATCA TTTTGGGTCG CTGTTGCTGCTGGCG SeD_A1844 1785211 - 1785825 + | twin-arginine leader-binding protein DmsD TERM 2317 1785837 - 1785854 + F 81 -8.4 -4.42788 | opp_overlap 1785837 TTAATCCCCACAAAA GGCAGG ATTTTA CCTGCC TTTTCTCCCATTGCG TERM 2318 1785854 - 1785837 - f 81 -8.4 -4.4017 | opp_overlap 1785837 TTAATCCCCACAAAA GGCAGG ATTTTA CCTGCC TTTTCTCCCATTGCG TERM 2319 1785903 - 1785891 - f 84 -7.7 -4.87665 | TTTTATCTACAAAAA GTGAC AAC GTCAC ACTACATTTCTGTTT TERM 2320 1786314 - 1786325 + G 71 -5.8 -4.25104 | overlap 1786303 CTTTACTGGTCGGTA TCCC GAGC GGGA TTTTACTCAGCCGAC SeD_A1845 1786130 - 1786840 + | binding-protein-dependent transport systems inner membrane component TERM 2321 1787310 - 1787284 - g 70 -8.8 -3.65542 | overlap 1787282 1787287 CCGAGTCGGAAAATA TCACCACCATCT CGC AAATGGTGGCAA AAATCGAACAGGTCC SeD_A1846 1786869 - 1787771 + | substrate-binding region of ABC-type glycine betaine transport system TERM 2322 1788040 - 1788054 + G 76 -3.4 -5.03405 | overlap 1788042 GTATTGGCGTTCTGC CCGCTG TGA CGGCCG TTTTTCTCTACTCTT SeD_A1847 1787781 - 1788428 + | binding-protein-dependent transport systems inner membrane component TERM 2323 1788783 - 1788764 - g 82 -11.4 -3.85698 | TTGGGTTGGGACAAA GCGCGCTG CAAG CAACGCGC CGAAGAGTTGATGGA SeD_A1848 1788428 - 1789576 + | choline transport ATP-binding protein opuBA TERM 2324 1789574 - 1789618 + F 73 -10 -3.31248 | opp_overlap 1789569 1789577, overlap 1789577 1789582 1789617 ATTCACGAAAGCAGC TAACGTTGCCGCCGGATGGC CTCTC GCTATCCGGCAGTATCATTA TTGTACGCAATATTA TERM 2325 1789582 - 1789610 + F 80 -12.4 -3.04443 | opp_overlap 1789569 1789577, overlap 1789577 1789574 AAGCAGCTAACGTTG CCGCCGGATGGC CTCTC GCTATCCGGCAG TATCATTATTGTACG TERM 2326 1789638 - 1789648 + F 74 -6.8 -4.2349 | ACGCAATATTATATC GCAC ATA GTGC TTTTGCGTCTGACGC TERM 2327 1790684 - 1790664 - g 70 -6.8 -4.07568 | TTTTTGCGTGCAAAA TCCTGGCG GTGCT CGCCAGCA GCGGGTCTGGCGCGC TERM 2328 1790916 - 1790886 - g 71 -9.7 -3.56092 | opp_overlap 1790889, overlap 1790887 1790889 TGATGATTTGTGAAA TGACCGGCGAGTA TCAGT TACTCCCCGGTCT GCTGATTGCCTGTGT TERM 2329 1790915 - 1790887 - g 79 -13.2 -2.73441 | opp_overlap 1790889, overlap 1790886 1790889 GATGATTTGTGAAAT GACCGGCGAGTA TCAGT TACTCCCCGGTC TGCTGATTGCCTGTG SeD_A1849 1789748 - 1791001 + | voltage-gated ClC-type chloride channel ClcB bioD2 1791652 - 1790957 - | dethiobiotin synthase mic 1792998 - 1791778 - | transcriptional regulator Mic TERM 2330 1792771 - 1792800 + g 77 -8.5 -4.08317 | gap 1, overlap 1792774 TTCCACCATCAGCCC GACGGCGGGACGTC CGC GACTGCCCGCC-TC TTTAATTTCAAGTTC TERM 2331 1792774 - 1792798 + g 79 -11.3 -3.62756 | overlap 1792771 CACCATCAGCCCGAC GGCGGGACGTC CGC GACTGCCCGCC TCTTTAATTTCAAGT SeD_A1852 1794025 - 1793126 - | LysR substrate binding domain protein TERM 2332 1793459 - 1793441 - G 83 -7.4 -4.66163 | opp_overlap 1793457 ATGCGGATCGAAAAA GACGAAAG GTT CTTCCGCC AGTTCTGTCAGACTG TERM 2333 1793702 - 1793690 - G 71 -6.3 -4.28254 | GCGGAACAGCGAAAA GGTAT GCG ATACC GCCCGAATAAAAGGC TERM 2334 1793760 - 1793792 + g 81 -11.9 -3.54424 | opp_overlap 1793768, overlap 1793761 TCACCCGCTTCGCCC TGATGCAACCGCTCG GCG CGAGCGGCGGCGTCG TTTACCAGACTCAGG TERM 2335 1793761 - 1793791 + g 79 -13.2 -2.72511 | opp_overlap 1793768, overlap 1793760 CACCCGCTTCGCCCT GATGCAACCGCTCG GCG CGAGCGGCGGCGTC GTTTACCAGACTCAG TERM 2336 1793784 - 1793768 - G 84 -13.7 -3.05384 | opp_overlap 1793761 1793760 TTCGCCCTGATGCAA CCGCTCG GCG CGAGCGG CGGCGTCGTTTACCA SeD_A1853 1794145 - 1795398 + | inner membrane transport protein YnfM TERM 2337 1795442 - 1795406 - f 80 -7.2 -4.65263 | opp_overlap 1795405 1795408, overlap 1795408 1795409 ATGCCTGAAAAGAAA TATTCCGGCGATAGCA ACGTG CGCTATCGCCGGGCTG GTTTCACGCCACGAC TERM 2338 1795440 - 1795408 - f 80 -9.8 -3.93868 | opp_overlap 1795405 1795408, overlap 1795406 1795409 GCCTGAAAAGAAATA TTCCGGCGATAGCA ACGTG CGCTATCGCCGGGC TGGTTTCACGCCACG TERM 2339 1795408 - 1795440 + F 74 -11.3 -2.90496 | opp_overlap 1795408 1795406 1795409, overlap 1795405 GCCTGAAAAGAAATA TTCCGGCGATAGC AACGTGC GCTATCGCCGGGC TGGTTTCACGCCACG TERM 2340 1795439 - 1795409 - f 82 -13.3 -2.95598 | opp_overlap 1795408 1795405, overlap 1795408 1795406 CCTGAAAAGAAATAT TCCGGCGATAGCA ACGTG CGCTATCGCCGGG CTGGTTTCACGCCAC SeD_A1854 1795793 - 1796041 + | acid shock protein repeat-containing protein TERM 2341 1796056 - 1796074 + F 84 -8.1 -4.57569 | gap 1, opp_overlap 1796051, overlap 1796056 1796057 1796068 AGTCGTAACATGCTG C-GGCGCG CCCC CGCGCCCG TTTTTACGGCGCTAA TERM 2342 1796057 - 1796072 + F 76 -11.8 -2.60211 | opp_overlap 1796051, overlap 1796056 1796056 1796068 GTCGTAACATGCTGC GGCGCG CCCC CGCGCC CGTTTTTACGGCGCT SeD_A1855 1796091 - 1796210 + | hypothetical protein SeD_A1856 1796310 - 1797131 + | peptidase S1 and S6 chymotrypsin/Hap TERM 2343 1797140 - 1797165 + T 86 -14.8 -2.62263 | opp_overlap 1797132 GGATTAATGCGGGAA TCGCTGCCTG AACCGA CAGGCAGCGA TCGTCTCAGGCAAAT SeD_A1857 1797500 - 1797171 - | multidrug transport protein SeD_A1858 1797849 - 1797487 - | small multidrug resistance protein SeD_A1859 1798098 - 1797961 - | hypothetical protein TERM 2344 1798901 - 1798868 - g 71 -4.5 -4.56775 | gap 1, overlap 1798870 ATCTGGTGCTAAAAA CA-GCGATCAGTATCG TGA CGGGACTGGTCGCATG GGGAATGCTGGCCGC SeD_A1860 1798267 - 1799301 + | inner membrane protein YdgG TERM 2345 1799459 - 1799442 - T 100 -12.7 -4.87786 | TGAAGTGTATAAAAA CGGCCTC CGAA GAGGCCG CCGCACGTTTAAAAG SeD_A1861 1800864 - 1799476 - | NAD(P) transhydrogenase, beta subunit TERM 2346 1799855 - 1799868 + g 72 -3.7 -4.72386 | opp_overlap 1799843 AAACGCACGTTGATA CCGCG CGCA CGCAG TTTTTCGGTGATTTC pntA 1802404 - 1800875 - | NAD(P) transhydrogenase, alpha subunit TERM 2347 1803131 - 1803117 - g 71 -7.8 -4.03234 | opp_overlap 1803117 CGCCGCGCAGATAAA GAAGGC GCA GCCTCC TTCTATGTTGTCGAC TERM 2348 1803473 - 1803456 - g 70 -7 -4.09117 | opp_overlap 1803472, overlap 1803469 1803472 TTTATCTATAAACAA GATGCG AAAAAA CGCATC GTCCAGAGCCCGGAC SeD_A1863 1802931 - 1803875 + | protein YdgH TERM 2349 1804871 - 1804856 - f 71 -3.9 -4.89063 | opp_overlap 1804869 1804870 CGAGCGAAAAATAAA CGCGA TGTAGG CCGCG CCACGCTACTGGCGG TERM 2350 1805085 - 1805098 + F 74 -8.1 -3.85698 | GCTGGACTATCATGG CGGCA GAGG TGCCG TTTCTGGCGGCAGCC TERM 2351 1805600 - 1805561 - f 81 -12.4 -3.28712 | overlap 1805562 CTGGTGGGTTGACAA CCTCCCCATCGTAATA TCCGTCTG TATTACGATGGGGAAA CCACGGTCTTTGCCA TERM 2352 1805599 - 1805562 - f 83 -13.7 -2.57132 | overlap 1805561 TGGTGGGTTGACAAC CTCCCCATCGTAATA TCCGTCTG TATTACGATGGGGAA ACCACGGTCTTTGCC SeD_A1867 1806082 - 1806813 + | transcriptional regulatory protein RstA SeD_A1868 1806900 - 1807028 + | hypothetical protein SeD_A1870 1807293 - 1808444 + | outer membrane protein N TERM 2353 1808466 - 1808484 + F 100 -17.4 -5.61277 | ATTAATTCTTCTCAA GCCCGCCG TTT CGGCGGGC TTTTCTTTTTTTATC SeD_A1871 1808603 - 1810303 + | putative amidohydrolase family protein TERM 2354 1810357 - 1810337 - f 77 -11.1 -3.28791 | opp_overlap 1810338, overlap 1810341 AGCCTGCTTTTATAA CCCACCAGC GGC GCTGACGGG AAATCTTTTTCGTCA TERM 2355 1810677 - 1810711 + G 73 -10.6 -3.33261 | opp_overlap 1810671, overlap 1810679 1810680 TCACTATAAGCTTGA TGCCGCCACCACGCAG CGA CTGCGTGAAGGCGATA TTGTCGCGCTTGACG TERM 2356 1810679 - 1810709 + G 74 -11 -3.23447 | opp_overlap 1810671, overlap 1810677 1810680 ACTATAAGCTTGATG CCGCCACCACGCAG CGA CTGCGTGAAGGCGA TATTGTCGCGCTTGA TERM 2357 1810680 - 1810708 + G 81 -14.5 -2.53747 | opp_overlap 1810671, overlap 1810679 1810677 CTATAAGCTTGATGC CGCCACCACGCAG CGA CTGCGTGAAGGCG ATATTGTCGCGCTTG SeD_A1872 1810414 - 1811715 + | sensor protein RstB TERM 2358 1811996 - 1812017 + G 71 -4.4 -4.67607 | opp_overlap 1811986 AAGAGGCCGAAACGC TGGCGCTA CGTCAC TATCGCCA TTTGTTTATTCAACA TERM 2359 1812067 - 1812079 + G 73 -6.2 -4.50976 | AGTAAAGCCGCCGTC CGCC TGCCT GGCG TTTTATGCTATCAAG TERM 2360 1812387 - 1812368 - g 100 -7 -5.44119 | overlap 1812369 1812370 GCCAGTTGAAAAAAA GCCTCGCG TCGC CGCGCAGC GTCCCGCCGTGGACG TERM 2361 1812554 - 1812538 - g 74 -4.3 -4.75404 | overlap 1812540 AAAGGCCAGCAAAAA CAGGTGC AAC ACGCCTG CCCCACGCCGATTAT TERM 2362 1812684 - 1812664 - g 71 -11.1 -2.90813 | opp_overlap 1812663 1812664 1812666, overlap 1812661 1812666 CACCGTTTTAAACCA CAGGCGCAG CCG CTGCGACTG ATTATTCCGCGACTG tus 1811791 - 1812720 + | DNA replication terminus site-binding protein fumC 1814120 - 1812717 - | fumarate hydratase, class II TERM 2363 1812803 - 1812827 + g 77 -8.5 -4.07535 | overlap 1812799 1812804 GGTATCCTAATGCCA CGGCTGAGGCT TTG AGCGTCAGCCC TTCTTTATGCGCCTT TERM 2364 1812804 - 1812826 + g 76 -12 -3.03798 | overlap 1812799 1812803 GTATCCTAATGCCAC GGCTGAGGCT TTG AGCGTCAGCC CTTCTTTATGCGCCT TERM 2365 1814287 - 1814262 - R 74 -11.1 -2.81509 | opp_overlap 1814262, overlap 1814259 1814254 CAAAATAGCGAATCA TGTTACCGCCC CGCA GGGCGGCGACA TTACTTAACGCAGCG TERM 2366 1814262 - 1814287 + r 79 -11.1 -3.33696 | opp_overlap 1814259 1814254 1814262 CAAAATAGCGAATCA TGTTACCGCCC CGCA GGGCGGCGACA TTACTTAACGCAGCG fumB 1815934 - 1814288 - | fumarate hydratase class I, anaerobic TERM 2367 1815676 - 1815689 + g 70 -6.7 -4.1899 | GCAGGAATTGCAGCG CGACA TATT TGTCG TTTTCACTGGCCTGC TERM 2368 1816353 - 1816333 - g 80 -4.5 -5.093 | opp_overlap 1816351, overlap 1816334 TCGAAAAGAATAAAA CCGCCATGC TGG GCGAAGCGG TAGCCAACCGTTTCG TERM 2369 1816367 - 1816379 + G 74 -6.9 -4.33928 | GGTAGCCAACCGTTT CGGCG AAC TGCCG TTTCTGTTTAAAGTA manA 1816134 - 1817309 + | mannose-6-phosphate isomerase, class I TERM 2370 1817367 - 1817388 + F 100 -13 -4.38116 | overlap 1817364 AGACGTAAAACTCCT CCAGGCGG TTTAAT CCGCCTGG TTTCATTTTTATGGA SeD_A1877 1817412 - 1818920 + | protein YdgA TERM 2371 1820139 - 1820111 - g 74 -9.7 -3.64198 | gap 1 GGCGCACAGAGAGAA CATCACCGCGCT GGATTT AGC-CGGTGATG AGCTGGGCTTTCCCG TERM 2372 1820607 - 1820595 - g 71 -4.7 -4.60041 | overlap 1820597 AGCGATGGCGAAAAA CGTGC GCT GCGCG AAAAAGTGGCCGCGG add 1819626 - 1820627 + | adenosine deaminase SeD_A1880 1821742 - 1820702 - | oxidoreductase family, NAD-binding Rossmann fold protein TERM 2373 1821371 - 1821357 - G 82 -5.6 -5.03314 | opp_overlap 1821358, overlap 1821358 TTCAGCGTCAAAAAA TCGCTG TCC CAGCGT CGGTTGTGGAAGACG TERM 2374 1822232 - 1822253 + H 73 -11.5 -2.61695 | overlap 1822231 1822229 CGTTAACCTTTCGCC CCAGGCGCC ATGT GGCGCCTGA CTCTTTACCGGTAAG TERM 2375 1822293 - 1822320 + H 89 -6.2 -5.3472 | TTTTTACCTGCACCC CTGCACCCCTGA CCTC TCACTGGTGCGG TTTTGTTTATTTTTT SeD_A1881 1822384 - 1822599 + | hypothetical protein SeD_A1882 1822655 - 1823128 + | inner membrane protein YdgK TERM 2376 1823620 - 1823632 + G 77 -4.7 -4.90869 | overlap 1823602 CGCTGTACGGATTTT CCGCC GCC GTCGG TTTTTCATTAGTGAT TERM 2377 1823682 - 1823701 + G 71 -6.3 -4.30576 | overlap 1823684 CGCGAACGCCTTGCC GTGGCGG ATGTGC CCGCCCC TTTTCGTGGTAACGC rnfA 1823205 - 1823786 + | electron transport complex, RnfABCDGE type, A subunit rnfB 1823786 - 1824364 + | electron transport complex, RnfABCDGE type, B subunit TERM 2378 1824516 - 1824501 - g 70 -6.8 -4.08767 | GTTATCCCCTTAAAA CAGCAC ATTG GCGCTG AGGGCGAGCTGTGCG TERM 2379 1825732 - 1825710 - g 76 -3.2 -5.06816 | AGGCTTGAAGAAAAA CGCGCCGCCG AAG CCAAAGCGCG TTTTGAGGCTCGTCA TERM 2380 1826451 - 1826439 - g 93 -4.7 -5.47218 | GTTCAGGCAAAAAAA GCAGC ACA GCAGC AGGTTGTTAACGAGG SeD_A1885 1824357 - 1826471 + | electron transport complex protein RnfC TERM 2381 1826569 - 1826582 + G 90 -5.9 -5.26875 | overlap 1826552 CTCTGCCGGGGATTG CCGCG CAGA CGTGG TTTTTTGGTTGGGGA TERM 2382 1827223 - 1827242 + G 74 -11.4 -3.2352 | gap 1, overlap 1827218 TCAGTTTTCTGCTCA CGCTGGCGC TAT GCGCC-GCG TTAGGTTGGCTTTTC SeD_A1886 1826472 - 1827530 + | electron transport complex protein RnfD SeD_A1887 1827534 - 1828154 + | electron transport complex protein RnfG TERM 2383 1828832 - 1828793 - g 95 -10.7 -4.54301 | gap 1, overlap 1828795 GAAAAAATGAAGAAA CGCCGCGCCGAAACCGCG CCTTC CGCAGTTCCGGCA-GGTG AAACAGGGAAAGTCT TERM 2384 1828830 - 1828795 - g 72 -11.9 -2.55644 | gap 1, overlap 1828793 AAAAATGAAGAAACG CCGCGCCGAAACCGCG CCTTC CGCAGTTCCGGCA-GG TGAAACAGGGAAAGT SeD_A1888 1828157 - 1828849 + | electron transport complex protein RnfE nth 1828849 - 1829484 + | endonuclease III TERM 2385 1830127 - 1830107 - g 91 -4 -5.64421 | opp_overlap 1830111 1830117, overlap 1830111 1830112 1830118 ACTGCAAACAAAAAA CCAACTGA AAGCG TCAGTTTG AACGCTTTCAAACAA TERM 2386 1830138 - 1830111 - g 77 -8.6 -4.07772 | gap 1, opp_overlap 1830111 1830117 1830127 1830130, overlap 1830107 1830112 1830118 CAAACAAAAAACCAA CTGAAAGCG-TCA GTT TGAACGCTTTCAA ACAACCGAAGGCGTT tppB 1830086 - 1831591 + | tripeptide permease TppB TERM 2387 1831579 - 1831568 - f 74 -5.8 -4.59109 | GATACCGCTGAAAAA GGCT CTAA AGCC GCTACAGTTTAATTT TERM 2388 1831614 - 1831636 + F 100 -13.5 -5.88471 | opp_overlap 1831610 GGAAACAACATTCAG GCCGCTAAC TGTGC GTTAGCGGC TTTTTTTTGCTCGTC gst 1831695 - 1832300 + | glutathione S-transferase TERM 2389 1833267 - 1833242 - T 80 -6.1 -4.87626 | opp_overlap 1833243 1833245, overlap 1833245 CCTGAACATCAAAAA TAAGGGAGTGA TTTC TCACTCCCTGT TACTTAATGCCTTAT TERM 2390 1833243 - 1833266 + T 73 -9.6 -3.41581 | opp_overlap 1833242 1833245, overlap 1833245 CTGAACATCAAAAAT AAGGGAGTGA TTTC TCACTCCCTG TTACTTAATGCCTTA TERM 2391 1833245 - 1833264 + T 81 -12.2 -3.27297 | opp_overlap 1833245 1833242, overlap 1833243 GAACATCAAAAATAA GGGAGTGA TTTC TCACTCCC TGTTACTTAATGCCT TERM 2392 1833264 - 1833245 - T 100 -12.2 -4.53398 | opp_overlap 1833243 1833245, overlap 1833242 GAACATCAAAAATAA GGGAGTGA TTTC TCACTCCC TGTTACTTAATGCCT tyrS 1834553 - 1833279 - | tyrosyl-tRNA synthetase TERM 2393 1833663 - 1833678 + g 81 -3.9 -5.21506 | overlap 1833658 1833662 TACATACTGCGCGCG CGGCG CTTTAC CGCTG TTTTTATCTTCTTCT TERM 2394 1833969 - 1833989 + g 74 -7.5 -4.15044 | GTCAGAACCGCCAAT CTGTAAGGC AAC GCCGTGCAG TTTATTCAGACAAGC pdxH 1835336 - 1834680 - | pyridoxamine 5'-phosphate oxidase SeD_A1896 1835718 - 1835395 - | putative lipoprotein anmK 1836933 - 1835812 - | anhydro-N-acetylmuramic acid kinase SeD_A1898 1837206 - 1837673 + | outer membrane lipoprotein pcp SeD_A1899 1838161 - 1837721 - | transcriptional regulator SlyA SeD_A1900 1838408 - 1838599 + | hypothetical protein TERM 2395 1839364 - 1839340 - g 80 -10.7 -3.83026 | GTGCCCGATATCAAA CCCAACGTACC GTG GGTACGTCTGG CGCAACGCGTACCGG SeD_A1901 1838602 - 1839462 + | P-hydroxybenzoic acid efflux pump subunit AaeA TERM 2396 1840778 - 1840788 + G 76 -5.4 -4.77757 | AATCACCGATCTGTG GCAA TTC TTGC TTTTCCTTTTTCCGC SeD_A1902 1839462 - 1841501 + | fusaric acid resistance domain protein sodC 1841998 - 1841477 - | copper/zinc superoxide dismutase SeD_A1904 1842974 - 1842078 - | oxidoreductase YdhF TERM 2397 1842518 - 1842506 - G 80 -9.1 -4.208 | opp_overlap 1842504 1842506 1842516 GCGTAAAATTAGAAA CGCCA AAA TGGCG CACTTTGCCGCTTTG TERM 2398 1842616 - 1842627 + g 85 -4.4 -5.17353 | opp_overlap 1842616 AACATATCCAGATAA TCTG TCGC CAGA TTTTTTAATGACTGT SeD_A1905 1843177 - 1843025 - | hypothetical protein TERM 2399 1843402 - 1843424 + G 71 -7.6 -4.03234 | opp_overlap 1843402, overlap 1843403 CGATACCCGCGAACA TCTGCTGGCC ACC GGCGAGCAGC TTTGTATGCAACGGG TERM 2400 1843403 - 1843423 + G 72 -11.1 -3.01726 | opp_overlap 1843402, overlap 1843402 GATACCCGCGAACAT CTGCTGGCC ACC GGCGAGCAG CTTTGTATGCAACGG SeD_A1906 1843367 - 1843966 + | transcriptional regulator, TetR family TERM 2401 1843953 - 1843972 + F 89 -6.4 -5.41941 | AGACCATCATTGCAA CGCCTG AGCAGTAA CAGGCG TTTTTATTTCCTTTA SeD_A1907 1844025 - 1845122 + | N-ethylmaleimide reductase gloA 1845191 - 1845598 + | lactoylglutathione lyase TERM 2402 1845604 - 1845631 + F 100 -14.8 -4.2828 | opp_overlap 1845599, overlap 1845607 GGGTAACTGATCCCC CGCCGGGCGCAG GTCA CTGCGCCCGTTG TTTTACTGCATCCCG TERM 2403 1845607 - 1845628 + F 100 -17.3 -4.26327 | opp_overlap 1845599, overlap 1845604 TAACTGATCCCCCGC CGGGCGCAG GTCA CTGCGCCCG TTGTTTTACTGCATC TERM 2404 1845722 - 1845736 + G 75 -7.1 -4.45077 | TAACGCTCAACTTTC CGGTC TGTGC GACCG TTTTCGTGGTTTTTA TERM 2405 1846267 - 1846277 + G 75 -6.8 -4.43859 | overlap 1846237 ATGATACCGAGCGGA CAGC GGT GCTG TTTTGTGAAATTGTC rnt 1845699 - 1846346 + | ribonuclease T TERM 2406 1846407 - 1846390 - T 100 -11.3 -5.0133 | opp_overlap 1846390, overlap 1846360 GATGGCGGTAAAAAA GCGACCT TTAC AGGTCGC TTTCTCCTTGCACAG TERM 2407 1846390 - 1846407 + T 89 -11.3 -4.05446 | opp_overlap 1846360 1846390 GATGGCGGTAAAAAA GCGACCT TTAC AGGTCGC TTTCTCCTTGCACAG SeD_A1910 1846771 - 1846424 - | putative monothiol glutaredoxin TERM 2408 1846730 - 1846749 + g 91 -7.9 -5.1101 | CAGGAGAATCGGGTT TTCAGCG ATCTGG CGCTGAA TTTTTTCGATAGTGG TERM 2409 1846953 - 1846967 + H 86 -4.3 -5.51402 | TAACGCGTTCGTGTT TAGCA TTAAT TGCTA TTTTTTTACATCTGT TERM 2410 1847542 - 1847529 - g 74 -2.3 -5.09245 | GCAAAAGTACAAAAA GCGAC GAAA ACCGC GATGTCCAAACTCAT SeD_A1911 1847106 - 1847927 + | NlpC/P60 family protein TERM 2411 1847960 - 1847930 - f 70 -9.8 -3.05066 | opp_overlap 1847931 1847932 AACAATTCGCTAATA TTTTATCCTGTCGT TTA ACGACAGGATAACT TCTTCTTTTGCGCCA TERM 2412 1847931 - 1847959 + F 95 -13.3 -4.20868 | opp_overlap 1847930, overlap 1847932 ACAATTCGCTAATAT TTTATCCTGTCGT TTA ACGACAGGATAAC TTCTTCTTTTGCGCC TERM 2413 1847932 - 1847958 + F 100 -16.8 -3.11798 | opp_overlap 1847930, overlap 1847931 CAATTCGCTAATATT TTATCCTGTCGT TTA ACGACAGGATAA CTTCTTCTTTTGCGC SeD_A1912 1848054 - 1848635 + | superoxide dismutase (Fe) TERM 2414 1848645 - 1848666 + F 100 -14.5 -4.07885 | opp_overlap 1848637 1848636 GCATAAGTCTGAGTA CGCAGAAGG TACG CCTTCTGCG TTTTAGAGAGGGATA TERM 2415 1849200 - 1849176 - g 81 -7.1 -4.79174 | overlap 1849171 1849197 ACGTAATCAACAAAA CGCGTTTTGTC GCT GAAGAAACGCG TAACGCGGTCTGGGC TERM 2416 1849207 - 1849197 - g 77 -8.2 -4.15044 | overlap 1849176 TTGTCGCTGAAGAAA CGCG TAA CGCG GTCTGGGCGGCAATT purR 1849103 - 1850128 + | transcriptional repressor PurR SeD_A1914 1851057 - 1850125 - | transcriptional regulator, LysR family TERM 2417 1850887 - 1850866 - G 75 -5.7 -4.56597 | opp_overlap 1850871, overlap 1850867 1850869 CCCTTCTTTTAAAAA CCAGACGCC AGCA GGCGTCAGT TCAACATCACGGTGA TERM 2418 1850884 - 1850869 - G 71 -10.4 -3.23708 | opp_overlap 1850871, overlap 1850867 1850866 TTCTTTTAAAAACCA GACGCC AGCA GGCGTC AGTTCAACATCACGG TERM 2419 1851304 - 1851316 + G 70 -3.3 -4.69027 | opp_overlap 1851283, overlap 1851312 CGCCGCGGTCAGCGC CAGCC TCA GCCTG TTTTTAGCTGGCTTT TERM 2420 1851470 - 1851447 - g 73 -8.8 -3.85698 | gap 1, opp_overlap 1851446 1851447 1851459 1851460 TGCTGTGGGTAGAAA GC-GCGGCAGC ACT GCTGACGCTGC GCTTTGTGCAGGCCG TERM 2421 1851975 - 1851962 - g 70 -3.1 -4.82901 | GCGGCGCTACAAAAA TGGCA GGGC TACCA ATTGCTTCCGTGGCT SeD_A1915 1851170 - 1852375 + | inner membrane transport protein YdhC cfa 1852665 - 1853813 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 2422 1853811 - 1853847 + T 74 -6.8 -4.27316 | gap 2, opp_overlap 1853817, overlap 1853815 1853818 1853819 CTGCGCGTTCCTCGC TAATCATCTCCCCCGCAT TTC ATGCGGGGGA-ATC-TTA TTTTCCGTTAGCCAA TERM 2423 1853815 - 1853844 + T 87 -10.1 -4.25859 | gap 1, opp_overlap 1853817, overlap 1853811 1853818 1853819 GCGTTCCTCGCTAAT CATCTCCCCCGCAT TTC ATGCGGGGGA-ATC TTATTTTCCGTTAGC TERM 2424 1853843 - 1853817 - T 81 -13 -2.70932 | opp_overlap 1853815 1853811 1853818 1853819 GTTCCTCGCTAATCA TCTCCCCCGCAT TTC ATGCGGGGGAAT CTTATTTTCCGTTAG TERM 2425 1853818 - 1853842 + T 100 -14.3 -3.72228 | opp_overlap 1853817, overlap 1853815 1853811 1853819 TTCCTCGCTAATCAT CTCCCCCGCAT TTC ATGCGGGGGAA TCTTATTTTCCGTTA TERM 2426 1853819 - 1853841 + T 100 -17.8 -2.82253 | opp_overlap 1853817, overlap 1853818 1853815 1853811 TCCTCGCTAATCATC TCCCCCGCAT TTC ATGCGGGGGA ATCTTATTTTCCGTT ribE 1854496 - 1853855 - | riboflavin synthase, alpha subunit TERM 2427 1854537 - 1854523 - H 79 -4.2 -5.18866 | CTGAAATAAATAAAA GCAGAA CTG TTCAGC ACAATAGCAGGTGGA TERM 2428 1854655 - 1854671 + H 85 -7.2 -4.946 | overlap 1854669 CTGCTATTTCTTTTG GCTGCC ACTAC GGCGGC TTTTTAGTCTTTCAT TERM 2429 1854872 - 1854884 + G 77 -4.8 -4.93877 | ATCGGCACCTCTATC TGGC TTCCC GCCA TTTTGTTTGGTCACG TERM 2430 1855098 - 1855136 + G 100 -10.2 -4.88918 | overlap 1855100 CCGATAAAGCCGTGG GTTATCTTCGCGCGCTGC TGT GGGGCGCGCCAGGATACC TTTTCTTTCAGGTAG TERM 2431 1855401 - 1855388 - g 74 -3.1 -4.86621 | ATTCGTAATGAAAAA GGCTT TGGC AAACC TGATAGCGTCGTCAT SeD_A1918 1854713 - 1856086 + | multidrug resistance protein NorM TERM 2432 1856095 - 1856114 + T 90 -10 -4.39828 | opp_overlap 1856089 1856087 1856097 GCGATAATACGACGA TAGCCGTC GCAT GGCGGCTA TTTTCTCGACATGTT SeD_A1921 1857617 - 1856559 - | secretion system apparatus protein SsaU TERM 2433 1856691 - 1856676 - G 71 -4.7 -4.63089 | CACTTCAAAAAATAA TGAGC GGGCCA GCTCA ACATTTTCAACAACG epaR 1858393 - 1857614 - | type III secretion apparatus protein SpaR/YscT/HrcT TERM 2434 1858016 - 1858001 - G 79 -3.2 -5.1383 | overlap 1858002 AATAACACACAAAAA CTGGCT GAAA AGCAAG CCAAAAAGTGAGGTT SeD_A1923 1858507 - 1858394 - | secretion system apparatus protein SsaS epaP 1859304 - 1858657 - | type III secretion apparatus protein, YscR/HrcR family epaO 1860340 - 1859372 - | type III secretion apparatus protein, YscQ/HrcQ family SeD_A1926 1860662 - 1860321 - | secretion system apparatus protein SsaP SeD_A1927 1861053 - 1860676 - | secretion system apparatus SsaO TERM 2435 1860897 - 1860875 - G 77 -7.8 -4.32177 | TTATCCCACAATAAA TGACAAGATA ACG TACCTTGCCA GCCCATTAATTCTTT SeD_A1928 1862387 - 1861056 - | flagellum-specific ATP synthase TERM 2436 1861245 - 1861235 - GR 72 -8.2 -3.65827 | overlap 1861236 CAACCTCCAGGTAAA GCGC CAG GCGC CGCCGCAATATCGCC SeD_A1929 1864392 - 1862347 - | secretion system apparatus protein SsaV TERM 2437 1863278 - 1863268 - GR 90 -5.4 -5.27938 | ATCCTCAAATAAAAA CCAT CTC ATGG CGTCAATATCACGAA TERM 2438 1863562 - 1863576 + gr 87 -11.4 -3.85698 | overlap 1863557 AGAACTCAACTCTGT CGCCAG GTT CTGGCG TTTCTCACCCGGGAC SeD_A1930 1864745 - 1864377 - | secretion system apparatus protein SsaM SeD_A1931 1865795 - 1864803 - | secretion system apparatus protein SsaL TERM 2439 1865389 - 1865405 + g 100 -7.3 -6.04324 | overlap 1865390 GTAAGCGTATCCAGT TGCGATT GCA AATCGCG TTTTTTCTTTTTTGA TERM 2440 1865390 - 1865404 + g 77 -8.6 -4.18934 | overlap 1865389 TAAGCGTATCCAGTT GCGATT GCA AATCGC GTTTTTTCTTTTTTG SeD_A1933 1866728 - 1866456 - | secretion system apparatus TERM 2441 1866597 - 1866607 + g 70 -6.8 -4.21631 | overlap 1866603 AATGGCGGTACCGAT CTGC AAT GCAG TTTGTTGCATCACTT SeD_A1934 1867771 - 1867022 - | type III secretion apparatus lipoprotein, YscJ/HrcJ family SeD_A1935 1868031 - 1867768 - | type III secretion system apparatus protein SeD_A1936 1868318 - 1868028 - | type III secretion system protein, SsaH family eprI 1868511 - 1868296 - | type III secretion apparatus needle protein SeD_A1938 1869294 - 1868605 - | secreted effector protein TERM 2442 1868908 - 1868898 - G 85 -2.4 -5.49569 | TAGCAATATAAAAAA CGGC ATT GCCT ATACTGTCGTGAGCC SeD_A1939 1870073 - 1869291 - | secreted effector protein TERM 2443 1870056 - 1870079 + g 73 -9 -3.90464 | opp_overlap 1870061, overlap 1870052 1870061 ATTACTTGCCGCTGA CGGAATATGA ATTT TCATATTTCG TTCTGTTATTTAAGC SeD_A1940 1870517 - 1870089 - | type III secretion low calcium response chaperone LcrH/SycD SeD_A1941 1870730 - 1870575 - | secreted effector protein SeD_A1942 1871497 - 1870994 - | translocation machinery component TERM 2444 1871408 - 1871429 + g 91 -9.5 -4.57569 | gap 1, overlap 1871428 TTTTTCTACGTTATA GCTGCGC-AT GAT ATCGCGCAGC TTTTTGGCAAGCTCC TERM 2445 1871545 - 1871563 + r 73 -11 -2.57721 | opp_overlap 1871544 1871545 GCGTTAACAAGGAAG GCGCTGGT AAT ACCAGTGC TACGTTACTCGCTTC SeD_A1943 1873051 - 1871597 - | translocation machinery component TERM 2446 1873038 - 1873050 + g 74 -4.9 -4.69664 | CTATCGCTATTACTG TGAAT TCG ATTCA TTTTTAGCTCCTGTC SeD_A1944 1873569 - 1873054 - | type III secretion low calcium response chaperone LcrH/SycD TERM 2447 1873371 - 1873359 - GR 76 -4.7 -4.8143 | TCAACAATTGAAAAA GTCGC GCT GCGCC GGCGAACTCTTTTAC SeD_A1945 1874114 - 1873524 - | secretion system effector SseB TERM 2448 1873777 - 1873753 - GR 88 -12.3 -3.524 | TATTTAGCCATATAA TCATCAATGGT CAT ACCATCGATGA GAATACCATTATCAC TERM 2449 1874026 - 1874061 + gr 74 -5.4 -4.57073 | gap 1, overlap 1874028 TGGGATAAGTCATCC TGGCTCCCGGTATCAGC GTT GCTGACGCC-GAAGCTA TTTTTAAACACAATA SeD_A1946 1874883 - 1874650 - | type III secretion system protein, YseE family SeD_A1947 1876099 - 1874900 - | type III secretion apparatus protein, YscD/HrpQ family TERM 2450 1875077 - 1875065 - G 73 -9.1 -3.86897 | overlap 1875045 GCGACTCTGTACAAA GCCAG CCA CTGGC GCAGGCAGATACTTG SeD_A1948 1877585 - 1876092 - | type III secretion outer membrane pore, YscC/HrcC family TERM 2451 1878778 - 1878792 + G 77 -4.2 -4.92757 | opp_overlap 1878778 TATCGATGAAAATAG CTTTCG TCG CGATAG TTTTATTCTTAATCA TERM 2452 1879562 - 1879550 - g 93 -4.7 -5.66868 | AATGAAGCAAAAAAA CGCGC TGA GCGAG CTAACAAACGTAAAA SeD_A1949 1878389 - 1881151 + | secretion system regulator:Sensor component SeD_A1950 1881182 - 1881820 + | EsrB SeD_A1953 1882898 - 1883857 + | putative inner membrane protein SeD_A1954 1884191 - 1883979 - | hypothetical protein TERM 2453 1884268 - 1884253 - R 78 -4.8 -4.99947 | CTCAATTAAACAAAA TTTGAT AAAA ATCAAA GAAATAACGCGGTTT SeD_A1955 1884909 - 1884289 - | response regulator TERM 2454 1884315 - 1884332 + gr 91 -7.7 -5.00616 | ACGTTGTTCGTATTC TGGTCTC TGGC GAGGCCA TTTTTTCGAAACGCC TERM 2455 1884579 - 1884603 + gr 87 -8.5 -4.57073 | overlap 1884566 1884576 CACGCTCCAGCGCCG CCTGTAGCGGT TTT ACCGATACCGG TTTTTGCAGAAAATC SeD_A1956 1886632 - 1884884 - | sensor-kinase TERM 2456 1887060 - 1887049 - g 74 -7.2 -4.21922 | opp_overlap 1887048 1887049 CTATTGAAAACCAAA CGCC GCAG GGCG CGTTTCGTACGACGG TERM 2457 1887249 - 1887234 - g 71 -6 -4.30719 | opp_overlap 1887238 1887241 1887248 GTGGTGGATAACAAA CGCTGC GTCG GCTGCG CCTATTGTGTCCAGG SeD_A1957 1886844 - 1887578 + | tetrathionate reductase subunit B TERM 2458 1888094 - 1888106 + G 70 -9.1 -3.63991 | GGCGATGTTCCTTAG CGCCT TAC AGGCG TTCTTCGCGCTGATG SeD_A1958 1887579 - 1888601 + | tetrathionate reductase complex, subunit C TERM 2459 1890354 - 1890341 - g 75 -6.7 -4.39828 | overlap 1890330 AATACCGCGACAAAA TTGCC GGCG GGCAA TCCCCTTATCCAGCC TERM 2460 1890698 - 1890670 - g 70 -8.7 -3.76224 | opp_overlap 1890677 1890690 GGCGTAGCCAGTAAA GCCACTACCGCCC GCT GGCCGGTTGTCGC CCCCGCCACTCGCCG SeD_A1959 1888594 - 1891656 + | molydopterin dinucleotide domain protein SeD_A1960 1891979 - 1893205 + | putative regulatory protein TERM 2461 1893907 - 1893931 + G 80 -9.4 -4.08216 | opp_overlap 1893909 TTTCTGCAATGGGAA CATTACGCCA CCTTC TGGTGTAATG TTTTACACACAATAA SeD_A1961 1893217 - 1893954 + | hypothetical protein TERM 2462 1894422 - 1894403 - f 74 -11.4 -2.78384 | CTTCGCGGGACGATA CTGGCCAG TTCG CCGGCCAG TATCGCCCTGTGGCA SeD_A1963 1894928 - 1896271 + | amino acid transporter TERM 2463 1896302 - 1896277 - f 71 -10.5 -2.64616 | overlap 1896289 1896290 GCTCGATTGACATTA TGCGCAACAAC ACCC ACTGTTGCGCA ACGCCGCCCCTGTTC TERM 2464 1896304 - 1896325 + F 90 -14.4 -3.28712 | opp_overlap 1896290 1896289 CCCACTGTTGCGCAA CGCCGCCC CTGTTC GGGCGGCG TTATCGCCAGCGACA TERM 2465 1897559 - 1897533 - g 72 -3.6 -4.77036 | overlap 1897535 1897558 TTCTATGATCAAAAA CCCGCGTCCG ACCCGCG CAGAAGCAGG CGACGTAGCGAACGC pykF 1896673 - 1898085 + | pyruvate kinase I TERM 2466 1898110 - 1898140 + F 86 -11.3 -3.76224 | opp_overlap 1898118, overlap 1898118 TGTGAATTAATTTGT TTAAAAAAGCGCC CTTCC GGCGCTTTTTTTA TTTAATCGATAGCCA TERM 2467 1898118 - 1898132 + F 100 -8.5 -5.99154 | opp_overlap 1898118, overlap 1898110 AATTTGTTTAAAAAA GCGCC CTTCC GGCGC TTTTTTTATTTAATC TERM 2468 1898132 - 1898118 - f 91 -8.5 -5.01732 | opp_overlap 1898118 1898110 AATTTGTTTAAAAAA GCGCC CTTCC GGCGC TTTTTTTATTTAATC lpp 1898396 - 1898632 + | major outer membrane lipoprotein TERM 2469 1898688 - 1898636 - f 100 -17.3 -2.54574 | opp_overlap 1898653, overlap 1898624 1898638 1898653 TACCGTAAGTAATAG TACCTGCGTAATAAAAATGGCGCAC ATC GTGCGCCATTTTTTTTACCCATATA ACCACACAAAGTATA TERM 2470 1898686 - 1898638 - f 93 -15.5 -2.80699 | opp_overlap 1898653, overlap 1898624 1898636 1898653 CCGTAAGTAATAGTA CCTGCGTAATAAAAATGGCGCAC ATC GTGCGCCATTTTTTTTACCCATA TAACCACACAAAGTA TERM 2471 1898671 - 1898653 - f 100 -14.6 -5.06414 | opp_overlap 1898653, overlap 1898638 1898636 CCTGCGTAATAAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTTACCCATA TERM 2472 1898653 - 1898671 + F 100 -14.6 -5.76949 | opp_overlap 1898653 1898638 1898636 CCTGCGTAATAAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTTACCCATA SeD_A1966 1898715 - 1898957 + | Lpp2 TERM 2473 1899000 - 1898972 - T 87 -14.7 -2.80935 | opp_overlap 1898977, overlap 1898977 ATTTGACGCACGATA TAAAATGGCGCAC ATC GTGCGCCATTTTT TTGTCCGTCGTTTGC TERM 2474 1898977 - 1898995 + T 100 -14.6 -5.64274 | opp_overlap 1898972 1898977 ACGCACGATATAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTGTCCGTCG TERM 2475 1898995 - 1898977 - T 100 -14.6 -4.57755 | opp_overlap 1898977, overlap 1898972 ACGCACGATATAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTGTCCGTCG SeD_A1967 1900024 - 1899023 - | ErfK/YbiS/YcfS/YnhG family protein TERM 2476 1900125 - 1900101 - R 72 -9.3 -3.60952 | overlap 1900099 1900123 1900124 GAACAACAAAATATA CGCTCTGTCCA CTC TGGATAAAGCG ACGTCGCCGTCCGAC SeD_A1968 1900595 - 1900179 - | cysteine desulfuration protein SufE TERM 2477 1900252 - 1900270 + g 74 -2.3 -5.0133 | overlap 1900253 GAACGAGAAGGTGTG AGGTGCT GCGCA AGCGCCA TTTTTTCGAACCATG SeD_A1969 1901828 - 1900608 - | cysteine desulfurase TERM 2478 1901035 - 1901011 - G 74 -7.8 -4.07568 | gap 1, opp_overlap 1901011 GTTCCCGCCTCAAAA CGCCA-GGGCG CTTT CGCCCATGTCG TTCCCTGCGTCAGGC TERM 2479 1901200 - 1901176 - G 77 -4.9 -4.89729 | overlap 1901178 GAGAAAACGTAAAAA TCGCAGTCCAG CGC CTGGACGTCAA CAGCATGGTGCATCA TERM 2480 1901786 - 1901807 + g 72 -3.7 -4.82901 | TAACTTCACGCTGCA GTATGGG AAAATCCG CCCGTAC TTTTTCTACAGGAAA TERM 2481 1901842 - 1901873 + r 77 -10.8 -3.34715 | gap 1, opp_overlap 1901833, overlap 1901840 ATACCAGGCCTCCGG GCAGTCGCTGGC-CG ATT CGCGCCAGCACCTGC TGTTTAAGGGCGCTA sufD 1903096 - 1901825 - | FeS assembly protein SufD TERM 2482 1902202 - 1902220 + gr 75 -6.6 -4.46073 | TGGTCTTGTGCGACT GGCGGCTG TTA CAGTAGCC TTTGTTATGTTCCAG sufC 1903817 - 1903071 - | FeS assembly ATPase SufC TERM 2483 1903666 - 1903696 + gr 71 -6.9 -4.07687 | gap 2, overlap 1903667 1903669 GTGACCTCATAATCT TCACG-TC-CCGCCA GGG TGGCGGAGAGCGTGC TTTTCCCGGAACCGT TERM 2484 1903667 - 1903695 + gr 73 -10.4 -3.04398 | gap 2, overlap 1903666 1903669 TGACCTCATAATCTT CACG-TC-CCGCCA GGG TGGCGGAGAGCGTG CTTTTCCCGGAACCG sufB 1905321 - 1903834 - | FeS assembly protein SufB TERM 2485 1904903 - 1904889 - G 74 -2.8 -4.89009 | AGACCGAATCAAAAA TCGC ATCGACG GCGA CCTCTTTCCCTTCGC sufA 1905698 - 1905330 - | FeS assembly scaffold SufA TERM 2486 1906497 - 1906519 + G 75 -6.9 -4.38712 | overlap 1906507 TTACTGACCGCTCAT GTGCTGGGG CTTGA CGCCAGCGC TTTTGTGCACATGCC SeD_A1974 1906125 - 1907471 + | transporter, dicarboxylate/amino acid:cation (na+ or H+) symporter (daacs) family TERM 2487 1907528 - 1907498 - T 100 -12.7 -5.45802 | CCCGGAAAAGAAAAA CCCTTAAGTCTGT TCAAT ACAGGCTTAAGGG TTCCGGCCCCATCCG SeD_A1977 1908456 - 1908046 - | esterase YdiI SeD_A1978 1911509 - 1908453 - | FAD linked oxidase TERM 2488 1909263 - 1909274 + g 76 -3 -5.01732 | CAGAGGTAAATCCAC CATA CCGA TATG TTTTTTCGCCAGATT TERM 2489 1909919 - 1909934 + g 80 -4.6 -5.07652 | GGTTAAGTCGATTAT GCGGAT CAAA AGCCGC TTTTATTTTGCGCAG TERM 2490 1911104 - 1911091 - G 81 -2.3 -5.40072 | TCCGGCGCAAAAAAA TAGCC ATAC GGCTT TAACGCTTGATTAAG SeD_A1979 1911774 - 1912892 + | inner membrane protein YdiK TERM 2491 1912895 - 1912921 + F 100 -15.8 -3.56862 | opp_overlap 1912894 1912893, overlap 1912885 1912896 1912898 CAAGCAGTCATAATC CCGTCGGGCGGC ATT GCCGCCCGATGC TTTAGCGACGTTTAT TERM 2492 1912896 - 1912920 + F 100 -19.3 -2.73635 | opp_overlap 1912894 1912893, overlap 1912895 1912885 1912898 AAGCAGTCATAATCC CGTCGGGCGGC ATT GCCGCCCGATG CTTTAGCGACGTTTA TERM 2493 1912898 - 1912918 + F 100 -18.3 -2.90992 | opp_overlap 1912894 1912893, overlap 1912896 1912895 1912885 GCAGTCATAATCCCG TCGGGCGGC ATT GCCGCCCGA TGCTTTAGCGACGTT TERM 2494 1913153 - 1913172 + F 100 -7.1 -6.17292 | CTGTGTGTAGTCTTT GCCCGTC TCCTAC GATGGGC TTTTTTTTTAACTTT TERM 2495 1913304 - 1913325 + F 100 -9.5 -5.21709 | GTCGAAACGGTGTCG GTGGTGCTA TTTA TAGCATCAC TTTTTTCATATAAAA SeD_A1981 1913350 - 1913709 + | putative cytoplasmic protein TERM 2496 1913867 - 1913882 + G 76 -9 -4.02762 | overlap 1913862 GAAAAATCGTTATTT CCCTAC CGCT GTAGGG TTGTATTTTAATTAC SeD_A1982 1913850 - 1914992 + | inner membrane transport protein YdiM TERM 2497 1915240 - 1915220 - f 72 -6.1 -4.26351 | opp_overlap 1915220 1915222 TATCAATGCAATAAA CCTGGCATT TTA AACGCCATG TTATGTACATATAAC TERM 2498 1915993 - 1916010 + G 74 -3.4 -4.88918 | overlap 1915994 CTCCCCTCGTCTGGC TGGAAG GCGTAG CTTCCG TTTTATTTGGCGTCG SeD_A1983 1915356 - 1916591 + | transporter, major facilitator family SeD_A1984 1916658 - 1917524 + | quinate/shikimate dehydrogenase aroD 1917569 - 1918327 + | 3-dehydroquinate dehydratase, type I TERM 2499 1919818 - 1919807 - g 80 -4.4 -5.00616 | overlap 1919809 GGTCGCGTGAAAAAA TTCG TCAG CGAA CTGCCGGAAATTACG SeD_A1986 1918481 - 1920076 + | propionate CoA-transferase SeD_A1987 1920090 - 1921241 + | acyl-CoA dehydrogenase SeD_A1988 1921901 - 1921317 - | transcriptional regulator, AraC family protein SeD_A1989 1921956 - 1922108 + | hypothetical protein TERM 2500 1922965 - 1922955 - g 74 -2.4 -5.00616 | GGCGCCGGGAAAAAA GCCG TTA CGTC GTGGCTGGCGAGCGA ydiQ 1922364 - 1923128 + | FixA protein SeD_A1991 1923150 - 1924085 + | protein FixB TERM 2501 1925032 - 1925054 + G 74 -7.6 -4.07868 | overlap 1925037 1925038 AAATGACGGTGTGAT GATTGTCGGC GAC GCCGCCGGTC TTTGTCTGAATCTCG TERM 2502 1925216 - 1925203 - g 70 -3.1 -4.82901 | gap 1, overlap 1925204 1925205 CGCGCTGGAGAAAAA CGGCGT GTT ACGC-G ATATGCGGCATTTCC SeD_A1992 1924142 - 1925428 + | probable electron transfer flavoprotein-quinone oxidoreductase YgcN SeD_A1993 1925425 - 1925718 + | ferredoxin like protein TERM 2503 1925761 - 1925731 - f 70 -9.1 -3.35046 | gap 1, opp_overlap 1925739 1925740, overlap 1925729 1925739 TGACGCTCTGAAACA CCGGATAACGACGC TACG GCGTC-TTATTCGG CTTGCCCCCGGAGAT TERM 2504 1925740 - 1925753 + F 72 -8.1 -3.68222 | opp_overlap 1925739 1925731 1925729, overlap 1925739 GAAACACCGGATAAC GACGC TACG GCGTC TTATTCGGCTTGCCC SeD_A1994 1925808 - 1927448 + | short-chain-fatty-acid--CoA ligase TERM 2505 1927443 - 1927493 + T 72 -8.3 -3.73068 | gap 1, opp_overlap 1927450 1927451, overlap 1927453 CAGGAGCACACTGCG GTA-TAAATTGCCGGATGGCGACG TTAA CGCCGCCATCCGGTATTACACTAC TTCTTCAGTTCCGCC TERM 2506 1927485 - 1927450 - T 100 -15.4 -3.86524 | opp_overlap 1927443 1927453, overlap 1927451 ACACTGCGGTATAAA TTGCCGGATGGCGACG TTAA CGCCGCCATCCGGTAT TACACTACTTCTTCA TERM 2507 1927484 - 1927451 - T 100 -18.9 -2.91593 | opp_overlap 1927443 1927453, overlap 1927450 CACTGCGGTATAAAT TGCCGGATGGCGACG TTAA CGCCGCCATCCGGTA TTACACTACTTCTTC TERM 2508 1927453 - 1927482 + T 100 -19.3 -3.08283 | opp_overlap 1927451 1927450, overlap 1927443 CTGCGGTATAAATTG CCGGATGGCGACG TTAA CGCCGCCATCCGG TATTACACTACTTCT ppsA 1929868 - 1927490 - | phosphoenolpyruvate synthase TERM 2509 1928028 - 1928010 - G 74 -7.4 -4.19746 | TCCAGCGCAAAACAA TCGCGGAA ACT TTCTGCGA CGTAACGACCCGCGC TERM 2510 1928425 - 1928451 + g 83 -7.2 -4.62336 | TGACCTTCAGCGGTA GCTCTGGCATGG TAT CTACGCTGGAGC TTTTTACGCTGAAAT SeD_A1997 1930205 - 1931038 + | protein YdiA TERM 2511 1932020 - 1932010 - g 71 -4.6 -4.62471 | GGCAACTGTCAAAAA CAGC ATC GCCG CCAGTTGGACGTATG SeD_A1998 1931194 - 1932240 + | 3-deoxy-7-phosphoheptulonate synthase TERM 2512 1932217 - 1932234 + F 79 -8.3 -4.2828 | opp_overlap 1932213 TTGGAAAAACTTGCC GCGGCGG TAGA CAGCCGC TTTTAATAGCTCGCC TERM 2513 1932246 - 1932268 + F 100 -15.6 -4.21631 | opp_overlap 1932243 CCGCTTTTAATAGCT CGCCCATCCT GCC GGGATGGGCG TTTCTTCGATGCGTT SeD_A1999 1932397 - 1932588 + | hypothetical protein SeD_A2000 1934065 - 1932623 - | protein YdiU TERM 2514 1933160 - 1933174 + g 70 -10 -3.41878 | overlap 1933157 AATAAAAGGGGTTAA CGTCTG CGC CAGACG TTGTAAATTCCACAG SeD_A2001 1934840 - 1934127 - | hypothetical protein TERM 2515 1934945 - 1934956 + r 71 -7.2 -4.04789 | CATTTTTCTTGTTTA CCGG TAAA CCGG TTCCTTTTTTTAACT TERM 2516 1935013 - 1935030 + r 80 -6.9 -4.72986 | overlap 1935014 TGTTGTACTTTTCAC AGGGCGT GAAC ACGCCCG TTTTTAATAAAAGTA TERM 2517 1935014 - 1935029 + r 77 -10.4 -3.4331 | overlap 1935013 GTTGTACTTTTCACA GGGCGT GAAC ACGCCC GTTTTTAATAAAAGT SeD_A2002 1935618 - 1935154 - | putative lipoprotein nlpC SeD_A2003 1936444 - 1935695 - | vitamin B12 import ATP-binding protein BtuD TERM 2518 1936449 - 1936460 + r 70 -2.2 -5.04325 | AATTGAGACATTATT TTGC CAAC GCGA TTTTTATGCTTTCCA SeD_A2004 1936995 - 1936444 - | peroxiredoxin Hyr1 SeD_A2005 1938067 - 1937087 - | vitamin B12 import system permease protein BtuC TERM 2519 1938129 - 1938155 + r 83 -13.8 -2.58861 | opp_overlap 1938135, overlap 1938135 TCCTTTACTTGAAAG AAAAAAGGCCGC AAT GCGGCCTTTTTA GTTATACGGGTCATC TERM 2520 1938135 - 1938149 + r 100 -12.8 -4.93365 | opp_overlap 1938135, overlap 1938129 ACTTGAAAGAAAAAA GGCCGC AAT GCGGCC TTTTTAGTTATACGG TERM 2521 1938149 - 1938135 - R 100 -12.8 -5.64421 | opp_overlap 1938135 1938129 ACTTGAAAGAAAAAA GGCCGC AAT GCGGCC TTTTTAGTTATACGG TERM 2522 1938227 - 1938186 - R 95 -11.7 -3.87815 | opp_overlap 1938188 TTTCAGGCTGACAAA TACGCTGTCATCCCG CTGATCTACTTT CGGGATGGCAGCGTA TCTGCCGCAATACAC TERM 2523 1938188 - 1938225 + r 77 -12.1 -2.87564 | opp_overlap 1938186 TCAGGCTGACAAATA CGCTGTCATCCCG CTGATCTACTTT CGGGATGGCAGCG TATCTGCCGCAATAC ihfA 1938569 - 1938270 - | integration host factor, alpha subunit pheT 1940961 - 1938574 - | phenylalanyl-tRNA synthetase, beta-subunit pheS 1941960 - 1940977 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 2524 1942054 - 1942024 - R 77 -12.1 -2.89564 | gap 1, opp_overlap 1942032, overlap 1942032 TCTCGATTTCAGATA CAAAAAAAGCCTCC ATCA GGAGGC-TTTTTTG CGCTGTTTTTCGTTT TERM 2525 1942047 - 1942032 - R 100 -10.4 -5.76633 | opp_overlap 1942032, overlap 1942024 TCAGATACAAAAAAA GCCTCC ATCA GGAGGC TTTTTTGCGCTGTTT TERM 2526 1942032 - 1942047 + r 100 -10.4 -5.10077 | opp_overlap 1942032 1942024 TCAGATACAAAAAAA GCCTCC ATCA GGAGGC TTTTTTGCGCTGTTT TERM 2527 1942252 - 1942230 - R 100 -12 -4.99568 | opp_overlap 1942232, overlap 1942232 GAACAGTAAATAAAA GAGAGGGAGC CAG GCTCCCTCTT TTCACTGGCTTATGC TERM 2528 1942232 - 1942250 + r 100 -14.6 -4.21676 | opp_overlap 1942232 1942230 ACAGTAAATAAAAGA GAGGGAGC CAG GCTCCCTC TTTTCACTGGCTTAT TERM 2529 1942250 - 1942232 - R 100 -14.6 -4.09862 | opp_overlap 1942232, overlap 1942230 ACAGTAAATAAAAGA GAGGGAGC CAG GCTCCCTC TTTTCACTGGCTTAT rplT 1942618 - 1942262 - | ribosomal protein L20 rpmI 1942866 - 1942669 - | ribosomal protein L35 TERM 2530 1942918 - 1942945 + r 72 -8.4 -3.81146 | opp_overlap 1942919 1942920, overlap 1942919 ACATAGGCGAACAAA ACCTGTGAAGCC CGAA GGCTTCACAGAA TTGTTACTTGAAGGC TERM 2531 1942919 - 1942944 + r 77 -11.9 -2.88366 | opp_overlap 1942919 1942920, overlap 1942918 CATAGGCGAACAAAA CCTGTGAAGCC CGAA GGCTTCACAGA ATTGTTACTTGAAGG TERM 2532 1942944 - 1942919 - R 100 -14.1 -4.66987 | opp_overlap 1942919 1942918, overlap 1942920 CATAGGCGAACAAAA CCTGTGAAGCC CGAA GGCTTCACAGA ATTGTTACTTGAAGG TERM 2533 1942943 - 1942920 - R 100 -15.4 -3.39469 | opp_overlap 1942919 1942918, overlap 1942919 ATAGGCGAACAAAAC CTGTGAAGCC CGAA GGCTTCACAG AATTGTTACTTGAAG infC 1943396 - 1942962 - | translation initiation factor IF-3 thrS 1945436 - 1943508 - | threonyl-tRNA synthetase TERM 2534 1944507 - 1944517 + g 74 -2.4 -5.00616 | ATCTTTATAGTTGTC CCAG TGC CCGG TTTTTTCCCACAGCA TERM 2535 1945150 - 1945135 - G 70 -3.2 -4.80882 | overlap 1945137 ACGTCATAGTAAAAA CCGTTG TCGA CAACCG GGCCGATCGCCATTT TERM 2536 1945586 - 1945565 - H 72 -10.3 -2.88758 | overlap 1945555 1945567 ACAACCTTCGACACA GACGAAAAT CGCT ATTTTCGTC CGGCATGACGATGGT SeD_A2013 1946334 - 1947557 + | O-antigen polymerase TERM 2537 1947589 - 1947555 - T 83 -10 -4.02253 | opp_overlap 1947564, overlap 1947558 1947559 1947562 CTAAGAAGCGATAAA TAATTTATACGGCGGC AAT GCCGCCGTTTTATTTA GTTTTGGAGCGTAAA TERM 2538 1947586 - 1947558 - T 71 -7.3 -4.11906 | opp_overlap 1947564, overlap 1947555 1947559 1947562 AGAAGCGATAAATAA TTTATACGGCGGC AAT GCCGCCGTTTTAT TTAGTTTTGGAGCGT TERM 2539 1947585 - 1947559 - T 73 -10.8 -3.06059 | opp_overlap 1947564, overlap 1947558 1947555 1947562 GAAGCGATAAATAAT TTATACGGCGGC AAT GCCGCCGTTTTA TTTAGTTTTGGAGCG TERM 2540 1947582 - 1947562 - T 78 -12.5 -2.73799 | opp_overlap 1947564, overlap 1947559 1947558 1947555 GCGATAAATAATTTA TACGGCGGC AAT GCCGCCGTT TTATTTAGTTTTGGA TERM 2541 1947564 - 1947580 + T 100 -15.1 -5.08483 | opp_overlap 1947562 1947559 1947558 1947555 GATAAATAATTTATA CGGCGGC AAT GCCGCCG TTTTATTTAGTTTTG TERM 2542 1948132 - 1948111 - T 72 -10.3 -2.88758 | overlap 1948101 1948113 ACAACCTTCGACACA GACGAAAAT CGCT ATTTTCGTC CGGCATGACGATGGT SeD_A2014 1949096 - 1948242 - | DNA/RNA non-specific endonuclease TERM 2543 1949500 - 1949471 - H 71 -10.1 -3.24735 | gap 1, opp_overlap 1949471 1949474, overlap 1949474 TATTTAAAGATTCAA TAAGCACTG-CGCA TCA TGCGGCTGTGCTTA TTACTTTGTAAAAAT TERM 2544 1949471 - 1949500 + H 75 -10.1 -3.60798 | gap 1, opp_overlap 1949471 1949474, overlap 1949474 TATTTAAAGATTCAA TAAGCACTG-CGCA TCA TGCGGCTGTGCTTA TTACTTTGTAAAAAT TERM 2545 1949474 - 1949497 + H 71 -7.4 -3.93401 | gap 1, opp_overlap 1949474 1949471, overlap 1949471 TTAAAGATTCAATAA GCACTG-CGCA TCA TGCGGCTGTGC TTATTACTTTGTAAA TERM 2546 1950023 - 1950005 - g 80 -5.2 -4.84761 | overlap 1950007 1950008 ATAGGCGCAGAAAAA TACCCTGC CTG GCAGGATC AAATTGAAAACCGTT TERM 2547 1950021 - 1950007 - g 71 -7.8 -4.04397 | overlap 1950005 1950008 AGGCGCAGAAAAATA CCCTGC CTG GCAGGA TCAAATTGAAAACCG SeD_A2016 1949549 - 1950508 + | putative outer membrane protein TERM 2548 1950549 - 1950527 - T 100 -17.8 -3.69395 | opp_overlap 1950517 1950523 1950521 GTCACCACGGAATAA CCGGGTTACG TAA CGTAACCCGG TACAATATTACATCT SeD_A2017 1951282 - 1950557 - | putative outer membrane protein TERM 2549 1951182 - 1951192 + g 82 -5.4 -5.03314 | opp_overlap 1951162 1951182 CCCGCATTCAGATTA CCTT CAA AAGG TTTTTTCGCGGTGGA TERM 2550 1951359 - 1951343 - H 89 -6.5 -5.32944 | CGTACAACTAAAAAA GAGACCA CGA CGGTCCC GGAAACTTTCATAGG TERM 2551 1951894 - 1951862 - g 71 -10 -3.60098 | overlap 1951865 ACCGTCGATGCGAAA GAC-TGGACGCGTCAG AAC CTG-CACGTCCACGTC GAGTCCAGCGGCGAA pfkB 1951604 - 1952536 + | 1-phosphofructokinase TERM 2552 1952565 - 1952537 - f 86 -11.7 -3.61398 | overlap 1952538 CTTTCCGCGCAATAA TCGTATCCCCCTC GGC GAGGGGGATACCG GAAAATCGGTAACGG TERM 2553 1952564 - 1952538 - f 93 -15.2 -2.76696 | overlap 1952537 TTTCCGCGCAATAAT CGTATCCCCCTC GGC GAGGGGGATACC GGAAAATCGGTAACG TERM 2554 1952581 - 1952596 + F 78 -11.8 -3.01791 | GAAAATCGGTAACGG GCGGCG CATC CGCCGC TGTTAAAAACACAAT TERM 2555 1952722 - 1952732 + G 78 -2.4 -5.16237 | CTCAATAATCATCTG ACGC GCA GCGG TTTTTTGCTGACATT TERM 2556 1952858 - 1952830 - g 86 -10.3 -4.10552 | opp_overlap 1952789 1952788 1952829 GCTGATGAAATCAAA GCGCTTGTCGC CGGACTT GCGAAAAGCGC ATTAGATAAGGATGT SeD_A2019 1952632 - 1952922 + | hypothetical protein TERM 2557 1953205 - 1953180 - g 77 -8.3 -4.08144 | gap 1, opp_overlap 1953173 1953187, overlap 1953173 1953181 GCGATGAACGAGAAA TGCTTC-GCGGT TTT ACCGCTGAAGCC GATCAGCTGGAGCTG TERM 2558 1953204 - 1953181 - g 76 -11.8 -3.04404 | gap 1, opp_overlap 1953173 1953187, overlap 1953173 1953180 CGATGAACGAGAAAT GCTTC-GCGGT TTT ACCGCTGAAGC CGATCAGCTGGAGCT SeD_A2020 1953029 - 1953889 + | fructosamine kinase TERM 2559 1953900 - 1953922 + T 100 -12.1 -4.81851 | TATAGGTACAGCCCA TGCCGGATA CGGGC TATCCGGCA TTTTTCAGTTTACAT SeD_A2021 1954468 - 1953932 - | hypothetical protein TERM 2560 1955059 - 1955046 - g 70 -3.1 -4.82901 | GCTTCTGCAGAAAAA TTGCC CTAC AGCAA ACCGCACCCGCAGGT TERM 2561 1955165 - 1955180 + G 72 -11.8 -2.64099 | opp_overlap 1955162 1955163, overlap 1955164 AATCGCGGCAAAGGC GGCGCG AATG CGCGCC ATTGTGGTGCCAGCA SeD_A2022 1954617 - 1955285 + | phosphatase YniC TERM 2562 1955444 - 1955456 + G 86 -4.1 -5.36441 | TTTATCATGACGGCG GAAGG ACA TCTTC TTTTTTCTATAGCCA SeD_A2023 1955423 - 1956022 + | inner membrane protein YdjM TERM 2563 1956691 - 1956680 - g 75 -5.8 -4.65895 | TTTTGTACCGAAAAA TCCG TTTG CGGA TCTGACTGGCGCAAA SeD_A2024 1956159 - 1957550 + | sodium:dicarboxylate symporter family protein TERM 2564 1957614 - 1957644 + T 100 -9.8 -5.5112 | opp_overlap 1957619, overlap 1957619 AAAATGTCTGTCACT AAAAACGCCGGT CTCCAGT ACCGGCGTTTTG TTTTTTCTTAGTCAG TERM 2565 1957639 - 1957619 - T 93 -9.7 -4.72272 | opp_overlap 1957614 1957619 GTCTGTCACTAAAAA CGCCGGT CTCCAGT ACCGGCG TTTTGTTTTTTCTTA TERM 2566 1957619 - 1957639 + T 100 -9.7 -5.55001 | opp_overlap 1957619, overlap 1957614 GTCTGTCACTAAAAA CGCCGGT CTCCAGT ACCGGCG TTTTGTTTTTTCTTA SeD_A2025 1957894 - 1957652 - | cell division activator CedA TERM 2567 1958432 - 1958400 - g 70 -9.8 -3.33696 | gap 1 CGGGCGCGCAACCAA CGGCCCCCGGCAGCT TAAA AGC-GCCCGAGACCG CGAATGATAAGCTCA TERM 2568 1959196 - 1959179 - g 74 -3.3 -4.88736 | opp_overlap 1959183, overlap 1959181 1959183 GATGAGTCACAAAAA CTGACCG GTCG CGATCCG GATTTTCACCGCCGG TERM 2569 1959677 - 1959655 - g 77 -11.2 -3.54029 | overlap 1959669 1959670 CTCCATTAATGACAA CTGGCCGCGC GAA ACGCCGCCAG CGCCAAAACGCGGCG SeD_A2026 1958261 - 1960513 + | catalase hpII TERM 2570 1960544 - 1960515 - T 74 -8.7 -3.86346 | gap 1, overlap 1960525 CGATTCCTGCATAAA CGGCA-AAAAATGC GGC GCATTCTTGCGCCG CAAACTCAGGAGCTA TERM 2571 1960546 - 1960525 - T 100 -15.9 -5.1361 | overlap 1960515 ATAAACGGCAAAAAA TGCGGCGCA TTCT TGCGCCGCA AACTCAGGAGCTAAA SeD_A2027 1961315 - 1960557 - | protein ChbG SeD_A2028 1962683 - 1961328 - | 6-phospho-beta-glucosidase SeD_A2029 1963650 - 1962808 - | HTH-type transcriptional regulator ChbR SeD_A2030 1964008 - 1963661 - | N,n'-diacetylchitobiose-specific phosphotransferase enzyme iiacomponent TERM 2572 1964023 - 1964057 + r 95 -12.9 -3.72363 | gap 1, overlap 1964024 TAGTCTTTCCTCTGA TTCAGC-CCGGCATGG CATC CCATGCCGGCGCGGAG TTTAGAATTTCAGTG TERM 2573 1964024 - 1964056 + r 84 -14.2 -2.82936 | gap 1, overlap 1964023 AGTCTTTCCTCTGAT TCAGC-CCGGCATGG CATC CCATGCCGGCGCGGA GTTTAGAATTTCAGT chbC 1965417 - 1964059 - | PTS system, N,N'-diacetylchitobiose-specific IIC component TERM 2574 1965137 - 1965121 - G 85 -4.3 -5.252 | CATGCCGATAAAAAA TGGCGCC ATG AGCGACA TAATGCCCAATGTGC TERM 2575 1965457 - 1965435 - R 72 -9.2 -3.64192 | opp_overlap 1965437, overlap 1965437 AAAAATACTCTTAAA TACCGCAATA AAA TATTGCGGTT AGTGTATGAAATAAC TERM 2576 1965455 - 1965437 - R 82 -11.8 -3.38603 | opp_overlap 1965437, overlap 1965435 AAATACTCTTAAATA CCGCAATA AAA TATTGCGG TTAGTGTATGAAATA TERM 2577 1965437 - 1965455 + r 82 -11.8 -3.32498 | opp_overlap 1965437 1965435 AAATACTCTTAAATA CCGCAATA AAA TATTGCGG TTAGTGTATGAAATA chbB 1965820 - 1965500 - | PTS system, N,N'-diacetylchitobiose-specific IIB component TERM 2578 1966089 - 1966074 - R 100 -7.5 -5.64274 | opp_overlap 1966074 GCAGGCACAAAAAAA CCGGC TCGCAG GCCGG TTTCCTTGAATGTTC TERM 2579 1966074 - 1966089 + r 74 -8.2 -3.95817 | opp_overlap 1966074 GCAGGCACAAAAAAA CCGGCT CGCA GGCCGG TTTCCTTGAATGTTC osmE 1966462 - 1966121 - | osmotically-inducible lipoprotein E SeD_A2035 1966728 - 1966594 - | hypothetical protein nadE 1966681 - 1967508 + | NAD+ synthetase SeD_A2036 1967629 - 1968510 + | GIY-YIG catalytic domain protein TERM 2580 1968565 - 1968517 - T 91 -8.1 -5.0065 | opp_overlap 1968557, overlap 1968557 CAGTCATAAAGAAAA CCGCCGATCCTGTCCACCTCA ACGATTG TGTTATCGACAAGACCGGCGG TCTTAAATTATGCGG spy 1969070 - 1968585 - | spheroplast protein Y SeD_A2038 1969267 - 1969154 - | hypothetical protein astE 1970374 - 1969406 - | succinylglutamate desuccinylase astB 1971710 - 1970367 - | succinylarginine dihydrolase TERM 2581 1971081 - 1971041 - G 78 -11.7 -3.16881 | opp_overlap 1971050 GATTCACCTGATTAA GACGCGCCACGGCCTCG CTGGCTT CGCGGCTCTGGCGCGCC GGATAACGAGCGGGT TERM 2582 1971523 - 1971508 - G 75 -6 -4.64334 | overlap 1971509 AACGCCGGAATAAAA GGCCGC TCAT GCGGCG GGATCACCGCCTGGG TERM 2583 1971522 - 1971509 - G 70 -9.5 -3.37877 | overlap 1971508 ACGCCGGAATAAAAG GCCGC TCAT GCGGC GGGATCACCGCCTGG astD 1973185 - 1971707 - | succinylglutamic semialdehyde dehydrogenase TERM 2584 1972455 - 1972435 - G 70 -9 -3.64487 | opp_overlap 1972435 CCACATCCTCAATAA TGAGCGGA TTGTT TCCGCCCA TTTCAAGGGCCAGTA astA 1974216 - 1973182 - | arginine N-succinyltransferase TERM 2585 1973654 - 1973642 - G 79 -3.3 -5.26316 | GTACCGCATAAAAAA TCCGC CCG GCTGA AATCCATAGAAAAAA SeD_A2043 1975433 - 1974207 - | succinylornithine transaminase TERM 2586 1975392 - 1975369 - G 70 -3 -4.75472 | CGTACAGGAATAAAA GGCGCGGG AACATACA CCGGCACC ATCCATTCATCAAAG xth 1975879 - 1976685 + | exodeoxyribonuclease III SeD_A2045 1976758 - 1977174 + | CTP pyrophosphohydrolase SeD_A2046 1977409 - 1977134 - | hypothetical protein TERM 2587 1977723 - 1977695 - g 73 -6 -4.44915 | gap 1 CAACCATGTACAAAA GCGCG-ACCCG CATCAAAC CGAGTTCGCGC AAGCCGTCCGTGAAG TERM 2588 1977887 - 1977863 - g 77 -4.9 -4.91109 | overlap 1977878 1977879 GCTGGACGACAAAAA CCAGGTGCA GGTAAAT CGCGCCTGG CGCGTGCAGTTCAAC TERM 2589 1978775 - 1978758 - g 71 -9.8 -3.53012 | TTTGCGCCGGGTAAA GCCGCC AACGCG GGCGGC GTGGCGACATCGGGG TERM 2590 1978961 - 1978986 + G 70 -8.9 -3.75169 | opp_overlap 1978956, overlap 1978962 1978964 TTTCGTGAAAGTCGC CGACGCCATGC TGGC GCAGGGCGTCA TTTAATCCCGTCGTC TERM 2591 1978962 - 1978985 + G 72 -12.4 -2.8478 | opp_overlap 1978956, overlap 1978961 1978964 TTCGTGAAAGTCGCC GACGCCATGC TGGC GCAGGGCGTC ATTTAATCCCGTCGT gdhA 1977648 - 1978991 + | NADP-specific glutamate dehydrogenase TERM 2592 1979036 - 1979058 + T 95 -7.6 -5.41143 | overlap 1978995 1979034 1979053 TTATTCGGTCTGACG GCCTGTCTCC TCA GCAGGCGGGC TTTTTTTGCCCGCTC topB 1980970 - 1979021 - | DNA topoisomerase III TERM 2593 1979066 - 1979088 + g 74 -6.9 -4.24787 | gap 1, overlap 1979053 AGGCGGGCTTTTTTT GCCCGCTCGC TTAC GCG-GCGCGC TCTTTTTCTTGTCTC TERM 2594 1979582 - 1979594 + g 74 -6.9 -4.30576 | opp_overlap 1979576 GGCGACAACCGGCAG CGGCG TAC CGTCG TTTTCCTCGTCGCGC TERM 2595 1979825 - 1979839 + g 84 -2.8 -5.31275 | opp_overlap 1979803, overlap 1979799 CGTCGGGATAATCGC GTGG TGCGCAT CCAC TTTTTTGTCATCCCA selD 1982018 - 1980975 - | selenide, water dikinase TERM 2596 1982082 - 1982120 + r 70 -5.3 -4.42386 | gap 1, opp_overlap 1982079 ATGTGGTAAGTATCA CTGTCTGAATTACCGCGC CTTT GCTCAG-AATCCAGACAG TTTTATCCCTCAGCG SeD_A2050 1982687 - 1982136 - | nitroreductase family protein TERM 2597 1982429 - 1982465 + g 74 -8.6 -3.96148 | opp_overlap 1982423 1982440, overlap 1982431 CGGTAATGATCAGCG GCGCGCGAAACGGCGC ATTAC GCGCTTTTTCGATCGC TTTCTCATCGCCCCC TERM 2598 1982431 - 1982453 + g 86 -7.6 -4.69027 | opp_overlap 1982423 1982440, overlap 1982429 GTAATGATCAGCGGC GCGCGAAACG GCG CATTACGCGC TTTTTCGATCGCTTT sppA 1982861 - 1984717 + | signal peptide peptidase SppA, 67K type TERM 2599 1985532 - 1985518 - g 70 -7 -4.09685 | opp_overlap 1985518 1985516 CGTCAGCCGGTAAAA GCGCTG ATT CTGCGC TCTTATGGCGTAGGC ansA 1984813 - 1985829 + | L-asparaginase 1 SeD_A2053 1985856 - 1986512 + | pyrazinamidase/nicotinamidase SeD_A2054 1987973 - 1986615 - | inner membrane metabolite transport protein YdjE SeD_A2055 1988867 - 1988109 - | transcriptional regulator, DeoR family SeD_A2056 1989980 - 1988997 - | oxidoreductase, aldo/keto reductase family TERM 2600 1989565 - 1989555 - G 80 -4.6 -5.01732 | opp_overlap 1989563, overlap 1989556 AATCGGCGTAAAAAA CGGC GGT ACCG ACTGCCAGTGGGTCA TERM 2601 1989748 - 1989758 + g 77 -4 -5.0133 | overlap 1989744 TCCACCACCATCTCG TTAC GCG GTAA TTTTTTCAGCGCCTG SeD_A2057 1990937 - 1989990 - | kinase, pfkB family SeD_A2058 1991778 - 1990942 - | fructose-bisphosphate aldolase, class II gutB 1992843 - 1991800 - | sorbitol dehydrogenase TERM 2602 1992560 - 1992547 - G 70 -9.5 -3.31726 | overlap 1992545 TCCTTCCAGACAATA GCGGC AGTG GCCGC ACGGCACGCCCGGCT TERM 2603 1992832 - 1992842 + g 81 -4 -5.25906 | TTTTAGTATCGCTTT TGAA TTT TTCA TTTTTATTCCTTTAT SeD_A2060 1994233 - 1992854 - | inner membrane metabolite transport protein YdjE TERM 2604 1993486 - 1993500 + g 70 -9.2 -3.69216 | opp_overlap 1993485, overlap 1993487 1993490 1993492 AATACGGTACGGAAC GCGGCG GCT TGCCGC TGTTTTCAATAACAA TERM 2605 1993487 - 1993502 + g 77 -8.2 -4.18018 | opp_overlap 1993485, overlap 1993486 1993490 1993492 ATACGGTACGGAACG CGGCGG CTTG CCGCTG TTTTCAATAACAACC TERM 2606 1994205 - 1994215 + g 95 -8.2 -4.90002 | opp_overlap 1994170, overlap 1994170 1994169 CGATCCAGCCGGGCG CCGC AGT GCGG TTTTGTTATCTGTTC SeD_A2061 1995336 - 1994260 - | oxidoreductase, zinc-binding dehydrogenase family SeD_A2062 1995587 - 1995453 - | hypothetical protein TERM 2607 1995580 - 1995598 + g 70 -5.2 -4.46775 | overlap 1995577 CGGTTATTTTTTCGC CACTCCAT TCT GTGGCGTG TTTCTGTTTTAGATG TERM 2608 1996041 - 1996024 - R 76 -4.8 -4.82667 | gap 1 GGACCAGATTAAAAA GCG-CGG ACTGG CCGGCGC AATGTTCTGGGAATA TERM 2609 1996208 - 1996195 - R 80 -9.5 -3.91084 | opp_overlap 1996191 1996190 1996205 GCATTGGCAATGAAA CCGCC GGAT GGCGG CTACCTCTTATCCGG SeD_A2064 1996508 - 1996230 - | general negative regulator of transcription subunit 1 msrB 1996963 - 1996550 - | methionine-R-sulfoxide reductase TERM 2610 1996601 - 1996589 - G 71 -6.2 -4.36914 | opp_overlap 1996600, overlap 1996591 TTTCTCGTCAGAAAA GGCC AGCGA GGCC GAGTTAACGCAATAG TERM 2611 1996730 - 1996716 - G 72 -2.1 -4.91511 | ATGCCATGAGAAAAA TCGTC TATGT AACGA ATCGCCTCTTCGCTG TERM 2612 1997233 - 1997249 + H 72 -2.9 -5.09245 | ATTGACACGATTCCG CTTGACG CTG CGTAAGG TTTTTGTAATTTTAC gapA 1997305 - 1998300 + | gIyceraldehyde-3-phosphate dehydrogenase TERM 2613 1998326 - 1998343 + F 100 -11.3 -5.95166 | opp_overlap 1998328 CACAGTCATTGGTAA GAGCGAC TCAG GTCGCTC TTTTTTTTGCTTAAA SeD_A2067 1998629 - 1999513 + | aldose 1-epimerase SeD_A2068 2000460 - 1999612 - | oxidoreductase, aldo/keto reductase family SeD_A2069 2001762 - 2000566 - | chondroitin sulfate/heparin utilization regulation protein TERM 2614 2001182 - 2001161 - G 74 -8 -3.97689 | gap 1, overlap 2001151 GATAACGTCAAAGAA CGCT-GCGC TTTTT GCGCGAGCG GCTCAACAATGGGAA TERM 2615 2001568 - 2001555 - G 74 -3.1 -4.85782 | gap 1 TTTGGTAAAAAGAAA GACCGC ATA GCG-TC GGCTCTCCCCCCTGC TERM 2616 2001993 - 2002029 + r 78 -6.6 -4.57341 | opp_overlap 2002003, overlap 2001997 2002003 ATGTTCGCGTTTCAG TTAGCACAAAGCCTGC ATAAC GCAGGCTTTGTCATGG TTTTTCCGGCAAATT TERM 2617 2001997 - 2002025 + r 76 -11.8 -2.53903 | opp_overlap 2002003, overlap 2001993 2002003 TCGCGTTTCAGTTAG CACAAAGCCTGC ATAAC GCAGGCTTTGTC ATGGTTTTTCCGGCA TERM 2618 2002019 - 2002003 - R 80 -10.1 -3.97947 | opp_overlap 2001997 2001993 2002003 TTCAGTTAGCACAAA GCCTGCA TAA CGCAGGC TTTGTCATGGTTTTT TERM 2619 2002003 - 2002019 + r 79 -9.4 -4.06719 | opp_overlap 2002003, overlap 2001997 2001993 TTCAGTTAGCACAAA GCCTGC ATAAC GCAGGC TTTGTCATGGTTTTT SeD_A2070 2002798 - 2002052 - | MltA-interacting protein TERM 2620 2004188 - 2004175 - g 74 -4.5 -4.72127 | opp_overlap 2004180, overlap 2004180 TAACAATAAAAATAA CGAAG CGTT CCTCG ACCGTGTCTATATCG SeD_A2071 2003225 - 2005159 + | serine protein kinase, PrkA TERM 2621 2005716 - 2005704 - g 76 -3.3 -5.10208 | TAATCTGAAGAAAAA CCAGC ATC GCCAG CTTAACGAGTATAAA TERM 2622 2006032 - 2006008 - g 77 -4.2 -4.88129 | gap 1, opp_overlap 2006008 2006011, overlap 2006010 AAAAATTATGAAAAA CGGCCTGAGCC CTCC AGC-CAGGCGG TGATGTTCTGTCTGA TERM 2623 2006191 - 2006202 + G 71 -4.4 -4.63218 | GCGAAGGAAGTGGAC GAAC ATGA GTTC TTTTATTCGCAAGAG SeD_A2072 2005282 - 2006568 + | protein YeaH TERM 2624 2006574 - 2006598 + F 87 -10 -4.26076 | opp_overlap 2006574 AAGCGTATAAATAAA TCCGCCCG TTCATATGT CGGGCGGA TTTTAATAAACCTGG TERM 2625 2006598 - 2006574 - f 93 -10 -4.56969 | opp_overlap 2006574 AAGCGTATAAATAAA TCCGCCCG TTCATATGT CGGGCGGA TTTTAATAAACCTGG TERM 2626 2007463 - 2007445 - g 80 -5.2 -4.85599 | opp_overlap 2007451 GTCACTGCAGAAAAA CGCCGC GCGTTTT GCGACG CCTTTGAGGCTATTA SeD_A2073 2007208 - 2008701 + | ggdef domain protein SeD_A2074 2008742 - 2009269 + | YbaK/prolyl-tRNA synthetase-associated domain protein SeD_A2075 2009409 - 2009266 - | putative inner membrane protein SeD_A2076 2009577 - 2009440 - | hypothetical protein TERM 2627 2009934 - 2009902 - g 81 -12 -3.60296 | gap 1, opp_overlap 2009909 TACGCTGATGGGAAA CCAACC-GCAGCTCG TCGC CGGGCTGCTGGTCGG TACGGTACTTGGCGT SeD_A2077 2009579 - 2010025 + | hypothetical protein TERM 2628 2010043 - 2010064 + F 100 -11.5 -5.03715 | opp_overlap 2010041 CGCCCGTCAGATACT GGCCTGGCG TCTG CCCCAGGCC TTTTTTAAACATGGT SeD_A2079 2010900 - 2012084 + | inner membrane transport protein YeaN SeD_A2080 2012188 - 2012051 - | hypothetical protein SeD_A2081 2012203 - 2012550 + | hypothetical protein SeD_A2082 2012847 - 2012536 - | hypothetical protein TERM 2629 2012673 - 2012685 + g 80 -10.5 -3.91716 | opp_overlap 2012667 CCGTAACCAGCCACA GCGCC CGA GGCGC TTCTTTCGGCAGTAA SeD_A2083 2013167 - 2012916 - | hypothetical protein SeD_A2084 2013422 - 2013538 + | hypothetical protein TERM 2630 2013551 - 2013581 + T 87 -14.3 -2.90219 | opp_overlap 2013554 2013558, overlap 2013554 2013558 TAAATTCATTTTGAA TAATAAAGGCTAC CTGTC GTAGCCTTTATTA TCTCTGAAAGTTCTG TERM 2631 2013554 - 2013578 + T 86 -11.6 -3.5947 | opp_overlap 2013554 2013558, overlap 2013551 2013558 ATTCATTTTGAATAA TAAAGGCTAC CTGTC GTAGCCTTTA TTATCTCTGAAAGTT TERM 2632 2013578 - 2013554 - T 86 -11.6 -3.63694 | opp_overlap 2013554 2013551 2013558, overlap 2013558 ATTCATTTTGAATAA TAAAGGCTAC CTGTC GTAGCCTTTA TTATCTCTGAAAGTT TERM 2633 2013558 - 2013574 + T 79 -8 -4.42974 | opp_overlap 2013554 2013558, overlap 2013554 2013551 ATTTTGAATAATAAA GGCTAC CTGTC GTAGCC TTTATTATCTCTGAA TERM 2634 2013574 - 2013558 - T 79 -8 -4.45068 | opp_overlap 2013558 2013554 2013551, overlap 2013554 ATTTTGAATAATAAA GGCTAC CTGTC GTAGCC TTTATTATCTCTGAA SeD_A2085 2013848 - 2013600 - | protein YeaQ SeD_A2087 2014041 - 2013856 - | hypothetical protein TERM 2635 2014084 - 2014105 + r 100 -12.3 -5.52384 | gap 1 CTTCCAGTATTATTT GCCCGC-CTC ACC GAGTGCGGGC TTTTTTTGCTAACCG SeD_A2088 2014803 - 2014162 - | hypothetical protein TERM 2636 2014984 - 2014956 - R 100 -13.9 -4.74706 | opp_overlap 2014956 2014955 TTCAATACGCAAAAA CCGCATCACGC TGGCGAC GCGCGATGCGG CTTCTGATTTAAAAA TERM 2637 2014956 - 2014984 + r 76 -11.7 -2.75769 | opp_overlap 2014956, overlap 2014955 TTCAATACGCAAAAA CCGCATCACGC TGGCGAC GCGCGATGCGG CTTCTGATTTAAAAA SeD_A2089 2015215 - 2015033 - | hypothetical protein SeD_A2091 2015580 - 2015218 - | hypothetical protein SeD_A2090 2015551 - 2015736 + | hypothetical protein TERM 2638 2015746 - 2015723 - TR 77 -10.2 -3.35344 | overlap 2015724 2015726 CCGAAAGGAGAGCAA TGACCCGCCG TTGA CGACGGGTCC GGGAGGGTTAAGACT TERM 2639 2015745 - 2015724 - TR 83 -13.7 -2.60725 | overlap 2015723 2015726 CGAAAGGAGAGCAAT GACCCGCCG TTGA CGACGGGTC CGGGAGGGTTAAGAC TERM 2640 2015743 - 2015726 - TR 72 -10.5 -2.83634 | overlap 2015724 2015723 AAAGGAGAGCAATGA CCCGCCG TTGA CGACGGG TCCGGGAGGGTTAAG SeD_A2092 2016392 - 2015754 - | translocator protein, LysE family SeD_A2093 2017134 - 2016589 - | monofunctional chorismate mutase TERM 2641 2016709 - 2016667 - G 100 -17 -3.72695 | overlap 2016689 2016704 ATTCGGCGCATTAAA CTGCGCTCTCAGCCACACCA TAT CGTCGTGGCTGAAAGCGCCG ACCATCAAGCGCTGG TERM 2642 2017312 - 2017345 + H 86 -4.7 -5.4756 | opp_overlap 2017312 2017322, overlap 2017322 AAAATATACAACAAA TCACACAAATGTGAT GCAT ATCACGTTTTTATGA TTTTTTATTACAGTT TERM 2643 2017325 - 2017312 - H 70 -5.3 -4.5002 | opp_overlap 2017312 2017322, overlap 2017322 AAAATATACAACAAA TCACA CAAA TGTGA TGCATATCACGTTTT SeD_A2094 2017510 - 2017698 + | putative cytoplasmic protein TERM 2644 2017809 - 2017787 - T 73 -11.4 -2.71144 | opp_overlap 2017784 2017791, overlap 2017791 GACTGGGGTGAACGA CAAATCTGCC GGG AGCAGATTTG AACGTCGCTTGCGAC TERM 2645 2017930 - 2017906 - T 95 -12.1 -3.93236 | opp_overlap 2017906 2017909, overlap 2017909 TATGAAGGGTATAAA CAAGGGAGGGG TTA CTCCTCCCCTG TTCGTTAATAATGCA TERM 2646 2017906 - 2017930 + T 82 -12.1 -3.41693 | opp_overlap 2017906 2017909, overlap 2017909 TATGAAGGGTATAAA CAAGGGAGGGG TTA CTCCTCCCCTG TTCGTTAATAATGCA TERM 2647 2017909 - 2017927 + T 78 -12.4 -2.56164 | opp_overlap 2017906 2017909, overlap 2017906 GAAGGGTATAAACAA GGGAGGGG TTA CTCCTCCC CTGTTCGTTAATAAT TERM 2648 2017927 - 2017909 - T 87 -10.2 -4.08948 | opp_overlap 2017909 2017906, overlap 2017906 GAAGGGTATAAACAA GGGAGGGG TTA CTCCTCCC CTGTTCGTTAATAAT SeD_A2095 2018800 - 2017952 - | putative transcriptional regulator SeD_A2096 2019516 - 2018869 - | putative regulatory protein TERM 2649 2019162 - 2019145 - G 77 -4.1 -5.02074 | TGACCTGGGAAAAAA TTGACCA GCAG CGGCCAA AATTAGTAATTCGCG TERM 2650 2020349 - 2020315 - R 71 -10.1 -3.137 | gap 1, opp_overlap 2020311, overlap 2020307 ATGAATAGCACGCAA CGTATCGCCTG-TGAC ACGA GTAATCAGGCGACACG CCGCTTCCGTTTGGC TERM 2651 2020464 - 2020483 + r 73 -7.8 -4.19506 | opp_overlap 2020464 AACGGCAGAAAAAAA GCCCGCTA TTCA TAGCGAGC TTTTAACATTGCAAT TERM 2652 2020483 - 2020464 - R 100 -10 -5.63504 | opp_overlap 2020464 AACGGCAGAAAAAAA GCCCGCTA TTCA TAGCGAGC TTTTAACATTGCAAT SeD_A2098 2021154 - 2020504 - | metal-binding protein YodA TERM 2653 2021165 - 2021185 + H 87 -11.3 -4.00486 | opp_overlap 2021159 ACCAAAACGTTACCC TCATCTTTC TTA GAAAGATGA TTGTTATATTATAAC TERM 2654 2021229 - 2021247 + H 100 -11.7 -5.21709 | opp_overlap 2021227 2021223 CAACAGAAACTCAGC GGCCACC GCGCA GGTGGCC TTTTTTGATATCAAC SeD_A2099 2021312 - 2021479 + | hypothetical protein TERM 2655 2021727 - 2021748 + F 83 -10.1 -4.02953 | opp_overlap 2021724, overlap 2021725 CTGCACAGAAACGCC GGGATAGCC AAAC GGCTACCCC TCTTTTTCATACTTT SeD_A2101 2021868 - 2023001 + | MscS Mechanosensitive ion channel TERM 2656 2023042 - 2023017 - T 83 -13.3 -3.29043 | opp_overlap 2023019, overlap 2023004 2023019 AATCTCTGCCGACAA TACCGGGAACC CATG GGTTCCCGGTG CGTTAACGGCGACAC TERM 2657 2023040 - 2023019 - T 100 -15.9 -3.21276 | opp_overlap 2023019, overlap 2023017 2023004 TCTCTGCCGACAATA CCGGGAACC CATG GGTTCCCGG TGCGTTAACGGCGAC TERM 2658 2023019 - 2023040 + T 90 -15.9 -2.52464 | opp_overlap 2023019 2023017 2023004 TCTCTGCCGACAATA CCGGGAACC CATG GGTTCCCGG TGCGTTAACGGCGAC SeD_A2102 2023673 - 2023083 - | ATP-binding protein of ABC transport system TERM 2659 2023272 - 2023252 - G 71 -4.6 -4.5442 | TCGGCAATCAGAAAA CGCGTTCG TGGGT CAAGCGCG CGCAGTATCGCAATA SeD_A2103 2024464 - 2023667 - | ABC nickel/di-oligopepetide transporter, ATP binding subunit SeD_A2104 2025270 - 2024458 - | ABC nickel/di-oligopepetide transporter, permease subunit TERM 2660 2025040 - 2025021 - G 75 -11.4 -3.31792 | gap 1, opp_overlap 2025010 2025036 TCACTAGCGCGATAA CGCCGCTGC ACA GC-GCGGCG CCAACGCCAATTTGT SeD_A2105 2026234 - 2025260 - | ABC-type dipeptide/oligopeptide/nickel transporter, permease component TERM 2661 2026194 - 2026165 - G 73 -6.3 -4.48175 | overlap 2026169 AAAAGCTAAGCAAAA TGAAGGTGCCGGC AGCC ACCAGCACCAACA GAATAATCAGCCGCA TERM 2662 2026190 - 2026169 - G 74 -10.1 -3.75718 | overlap 2026165 GCTAAGCAAAATGAA GGTGCCGGC AGCC ACCAGCACC AACAGAATAATCAGC SeD_A2106 2027868 - 2026234 - | nickel ABC transporter, periplasmic nickel-binding protein TERM 2663 2027297 - 2027312 + g 79 -3.2 -5.1861 | overlap 2027298 GGACCGGCGCCTATC GGTTCG CGGG CGAACG TTTTTTCATCATAAC SeD_A2107 2028011 - 2028154 + | hypothetical protein SeD_A2108 2028300 - 2028458 + | hypothetical protein SeD_A2110 2028569 - 2028435 - | hypothetical protein TERM 2664 2028490 - 2028519 + gF 72 -3.5 -4.76274 | opp_overlap 2028494, overlap 2028491 2028494 TACACCACTTTTTTA ATGACTGTCCGGA CATT TTCGGACGGTAAG TTTTCTATTAATTTA SeD_A2109 2028550 - 2028864 + | hypothetical protein TERM 2665 2028897 - 2028868 - fH 76 -8.5 -4.05607 | opp_overlap 2028874, overlap 2028870 2028874 AGAGGACAATAACAA CAGTAAGCCGGCG ATGC CGCCGGCTTTTTA TCCCATTTTACGTGC TERM 2666 2028895 - 2028870 - fH 72 -8.9 -3.60967 | opp_overlap 2028874, overlap 2028868 2028874 AGGACAATAACAACA GTAAGCCGGCG ATGC CGCCGGCTTTT TATCCCATTTTACGT TERM 2667 2028891 - 2028874 - fH 93 -14.1 -3.50302 | opp_overlap 2028874, overlap 2028870 2028868 CAATAACAACAGTAA GCCGGCG ATGC CGCCGGC TTTTTATCCCATTTT TERM 2668 2028874 - 2028891 + FH 100 -14.1 -4.90296 | opp_overlap 2028874 2028870 2028868 CAATAACAACAGTAA GCCGGCG ATGC CGCCGGC TTTTTATCCCATTTT SeD_A2111 2029013 - 2029543 + | nickel-dependent hydrogenase, B-type cytochrome subunit TERM 2669 2029551 - 2029587 + T 80 -10.1 -3.9461 | gap 1, opp_overlap 2029571, overlap 2029552 AATCATGACTATTTC GGCCAT-CCCGGCGTG AGAGAG CACGCCGGGCAAGGCA TTATTATTCCAGCGC TERM 2670 2029552 - 2029586 + T 85 -13.6 -2.96444 | gap 1, opp_overlap 2029571, overlap 2029551 ATCATGACTATTTCG GCCAT-CCCGGCGTG AGAGAG CACGCCGGGCAAGGC ATTATTATTCCAGCG TERM 2671 2030445 - 2030431 - T 73 -7.8 -4.18506 | CGACGGGTAAAATAA CACCGG ATT CCAGTG CGCTTCCCCCTCGCG TERM 2672 2030999 - 2030974 - T 100 -17.7 -3.12351 | opp_overlap 2030965 2030978, overlap 2030978 TTTCGCTACAGGCAA TGAAGGCCCGT CTAA ACGGGCCTTCA TTAACGCGATTATGA TERM 2673 2030978 - 2030995 + T 85 -12.7 -3.34192 | opp_overlap 2030974 2030978, overlap 2030965 GCTACAGGCAATGAA GGCCCGT CTAA ACGGGCC TTCATTAACGCGATT TERM 2674 2030995 - 2030978 - T 85 -12.7 -3.39142 | opp_overlap 2030978 2030965, overlap 2030974 GCTACAGGCAATGAA GGCCCGT CTAA ACGGGCC TTCATTAACGCGATT SeD_A2114 2031479 - 2031009 - | heat shock protein TERM 2675 2031764 - 2031781 + H 76 -8.3 -4.07885 | opp_overlap 2031760 2031763, overlap 2031765 CATTATCAAACCCAG CGCCGCC TTCG GGCGGCC TTTTGGGAGGAAATA TERM 2676 2031765 - 2031780 + H 78 -11.8 -3.04517 | opp_overlap 2031760 2031763, overlap 2031764 ATTATCAAACCCAGC GCCGCC TTCG GGCGGC CTTTTGGGAGGAAAT SeD_A2115 2031796 - 2031969 + | hypothetical protein TERM 2677 2032061 - 2032035 - T 70 -9.3 -3.41125 | overlap 2032036 TTTATACACCTACAA TTTGCGCCCGG CGGCT CCGGGCGCCAT ACCTAAAGATATGAC TERM 2678 2032060 - 2032036 - T 78 -12.8 -2.64354 | overlap 2032035 TTATACACCTACAAT TTGCGCCCGG CGGCT CCGGGCGCCA TACCTAAAGATATGA SeD_A2116 2032226 - 2032101 - | hypothetical protein SeD_A2117 2032604 - 2032948 + | putative periplasmic protein TERM 2679 2032979 - 2032959 - T 87 -9.7 -4.21319 | opp_overlap 2032959 ACTAACCTTAAGAAA TGCCTGAAG ACT CATCAGGCA TTTCCACTTCAACCT TERM 2680 2032959 - 2032979 + T 79 -9.7 -3.66356 | opp_overlap 2032959 ACTAACCTTAAGAAA TGCCTGAAG ACT CATCAGGCA TTTCCACTTCAACCT TERM 2681 2033218 - 2033250 + T 82 -13.4 -3.05384 | opp_overlap 2033165 2033218 ACGATCACCAGCCAA CCGCGCCAGGGTCT TGCAT ACGCTCTGGCGCGG TTAAATCCCCAGGCC TERM 2682 2033250 - 2033218 - T 70 -9.8 -3.10894 | gap 1, opp_overlap 2033218, overlap 2033165 ACGATCACCAGCCAA CCGCGCCAGGGTCTT GCAT ACG-CTCTGGCGCGG TTAAATCCCCAGGCC TERM 2683 2034131 - 2034160 + T 100 -14.3 -3.68359 | overlap 2034135 2034154 CCTGTTTTGTGACTG GCGGTGCGGAAGG CGAA CCTTCCGCATAGC TTATGCTTTTCAGAA TERM 2684 2034135 - 2034156 + T 86 -14.5 -2.65876 | overlap 2034131 2034154 TTTTGTGACTGGCGG TGCGGAAGG CGAA CCTTCCGCA TAGCTTATGCTTTTC SeD_A2120 2034727 - 2034170 - | virulence membrane protein PagC TERM 2685 2034305 - 2034318 + g 73 -5.3 -4.63218 | CCAGGCAAATCCCGT TTTCC TTGA GGAAA TTTTGTTAGAAAAAG TERM 2686 2034421 - 2034411 - G 75 -4 -4.93365 | GCGTATAACGAAAAA TTGT CAG ACAA TCGATAGGCTGGCCC SeD_A2121 2035235 - 2035107 - | hypothetical protein SeD_A2122 2035765 - 2035893 + | hypothetical protein SeD_A2123 2036561 - 2037082 + | EnvE TERM 2687 2037106 - 2037141 + F 73 -10.5 -2.94329 | opp_overlap 2037104, overlap 2037105 CGCTGTGAAGAGAGT GCCGCTAACCTCTTG ACACGA CAACAGGTTAGCGAC CTTTACTTCCACGTG SeD_A2124 2037273 - 2037512 + | hypothetical protein TERM 2688 2037567 - 2037550 - T 95 -12.7 -4.18197 | opp_overlap 2037550 2037552 ATGTCCGATCGAAAA CAGCGCC CTGA GGCGCTG TCTGTGACGATATAA TERM 2689 2037550 - 2037567 + T 79 -12.7 -2.89191 | opp_overlap 2037550, overlap 2037552 ATGTCCGATCGAAAA CAGCGCC CTGA GGCGCTG TCTGTGACGATATAA TERM 2690 2037552 - 2037565 + T 70 -9.5 -2.99649 | opp_overlap 2037550, overlap 2037550 GTCCGATCGAAAACA GCGCC CTGA GGCGC TGTCTGTGACGATAT TERM 2691 2037946 - 2037971 + T 77 -9.1 -3.87627 | opp_overlap 2037950, overlap 2037944 TTACTATGTTTCCAG GATAGTCTCGA CCAG TCAAGACTATC TATTTTATATAAAAA TERM 2692 2038026 - 2038012 - T 71 -3.6 -4.75472 | opp_overlap 2038001 TTCACATGAATAAAA TACATG TTA CATATA AAAATCTCTTACTTC SeD_A2127 2040905 - 2039781 - | putative cytoplasmic protein TERM 2693 2041317 - 2041345 + r 82 -11.8 -3.37402 | opp_overlap 2041322, overlap 2041322 TCGAATACTAATAAT AAAAACGGGGAC GTTAA GTCCCCGTTTTA GTTTTTAACAATTAT TERM 2694 2041322 - 2041340 + r 100 -11.7 -4.77757 | opp_overlap 2041322, overlap 2041317 TACTAATAATAAAAA CGGGGAC GTTAA GTCCCCG TTTTAGTTTTTAACA TERM 2695 2041340 - 2041322 - R 100 -11.7 -5.31855 | opp_overlap 2041317 2041322 TACTAATAATAAAAA CGGGGAC GTTAA GTCCCCG TTTTAGTTTTTAACA icd 2042616 - 2041366 - | isocitrate dehydrogenase, NADP-dependent TERM 2696 2041802 - 2041813 + g 71 -7.2 -3.965 | ACCACGATCTCTTTA CCCG TGTT CGGG TTCTTAATTTTCAGC TERM 2697 2042840 - 2042828 - g 76 -2.7 -5.11613 | overlap 2042829 ACACCATGCAAAAAA CTTCT TTT AGAAA TCACTACGTTAAGCG TERM 2698 2043082 - 2043057 - g 72 -11.2 -3.14132 | gap 1 TTTGGTGCTGACTAA TGACGGCGCGC TGCAG GCGCGCC-TCA CGCAACCGGGCAAAC SeD_A2129 2042716 - 2043453 + | RNA pseudouridine synthase family protein SeD_A2130 2043450 - 2043779 + | putative secreted protein TERM 2699 2044007 - 2044033 + G 74 -2.2 -5.12068 | opp_overlap 2043982 ATGCATCAGTGGATT GCGCCGGA TAAAACCCCGT TCCTGCGC TTTTTATTCGCTATC SeD_A2131 2043791 - 2044252 + | hydrolase, NUDIX family trmU 2044306 - 2045412 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2700 2045421 - 2045470 + F 72 -2.8 -4.93877 | opp_overlap 2045421 2045428 GGTCTGATTATTCAA TACACAACACCATTCAAGTCGC CTCAAA GCGGCTTAAAAGATGAAGTGTA TTTTATTTGATACAA SeD_A2133 2045499 - 2046140 + | hypothetical protein TERM 2701 2046201 - 2046219 + G 71 -4.4 -4.58395 | opp_overlap 2046201 2046202 2046205, overlap 2046202 CGCTACGGCGATAAA GTCAGCGC GCT GCGCGGAA TTTTTAGCGAATACG TERM 2702 2046471 - 2046453 - g 81 -3.8 -5.27335 | gap 1, overlap 2046454 2046455 TTTCTGAAAGAAAAA GTCGCCG CGATCC CGGCG-C TACATGACGTTTCCG purB 2046144 - 2047514 + | adenylosuccinate lyase TERM 2703 2047522 - 2047552 + F 76 -9.1 -3.67724 | overlap 2047519 2047523 TTAAATAATGCCTGC CTCACCCTCTTTT CTTCA GAAAGAGGGTGAC TATTTGTCTGGTTTA TERM 2704 2047523 - 2047551 + F 79 -12.6 -2.7955 | overlap 2047522 2047519 TAAATAATGCCTGCC TCACCCTCTTTT CTTCA GAAAGAGGGTGA CTATTTGTCTGGTTT SeD_A2135 2047638 - 2048312 + | transcriptional regulatory protein PhoP TERM 2705 2049455 - 2049445 - g 74 -6.8 -4.25104 | TGTCGGCGAGCAAAA CGAC TTT GTCG AAGTAATGGGCAACG SeD_A2136 2048312 - 2049775 + | sensor protein PhoQ SeD_A2137 2049856 - 2050977 + | cupin family protein SeD_A2138 2052351 - 2051017 - | putative periplasmic protein TERM 2706 2051664 - 2051651 - G 76 -3.1 -5.00616 | gap 1 TTCTGCTGCAAAAAA GAGGCG ACG CGC-TC ACGATTATCCCAGGT TERM 2707 2052007 - 2051980 - G 70 -3.3 -4.79451 | ACCGTAAACATAAAA GGCCGCCAGGT GTTCAA ACATATCGGCC CGATCACCCGGATAA TERM 2708 2052320 - 2052293 - G 100 -9.2 -4.87665 | overlap 2052297 CTCCAGGCAGAAAAA TTGATGGCGGAA AATA TCCCGCCATAAA TAATAAAACGCTTCA pepT 2053584 - 2052355 - | peptidase T TERM 2709 2053397 - 2053419 + g 72 -4.1 -4.76892 | gap 1 CCCTCAACATTGGCC GGGAGCGTCG CCAT CAACG-TCCC TTTTTCACTTAATGT TERM 2710 2054216 - 2054190 - g 90 -5.7 -5.17576 | opp_overlap 2054208, overlap 2054207 TACGAATGCAAAAAA CGCCAGCCGCC GAGAT AGCGCCTCGCG TGACCGATGCGCTGC potA 2053835 - 2054971 + | spermidine/putrescine ABC transporter, ATP-binding protein TERM 2711 2055770 - 2055782 + G 76 -10.5 -3.67597 | GCTGTTGATTTACTG GCGGG CTT CCCGC TTATTGAATAAGAAG SeD_A2141 2054955 - 2055818 + | spermidine/putrescine transport system permease protein PotB SeD_A2142 2055912 - 2056088 + | hypothetical protein TERM 2712 2056762 - 2056752 - g 70 -3.2 -4.6971 | GAAAGCGCAAGAAAA GGCA ACC TACC TGGCAGCGAAAATTC TERM 2713 2057125 - 2057147 + G 78 -2.1 -5.26316 | gap 1 CACGTTCGCTCAGAA CAACA-AAGC GGCT GTTTATGTTG TTTTTTATAAAATCA SeD_A2143 2056147 - 2057157 + | protein SifA SeD_A2144 2057248 - 2057370 + | hypothetical protein TERM 2714 2057716 - 2057739 + G 81 -11.7 -3.53012 | ATTGGCTCGTTAACC GCGGTGGCG CTTTAT CGCTACCGC TTTCGCGGGAAACCA SeD_A2145 2057473 - 2058252 + | spermidine/putrescine ABC transporter membrane component TERM 2715 2058257 - 2058243 - f 72 -8.5 -3.75115 | opp_overlap 2058242, overlap 2058239 TCGTGATAAAACCAA GGGCC GATAA GGCCC GTAATTCAGGGGACG SeD_A2146 2058277 - 2059323 + | spermidine/putrescine-binding periplasmic protein npdA 2060226 - 2059405 - | NAD-dependent deacetylase TERM 2716 2060278 - 2060267 - R 73 -2.2 -5.1615 | gap 1 GTAAGATGTAAAAAA GCAGC ACC GC-GC CTCCCACCTGCATCC nagK 2061156 - 2060245 - | N-acetylglucosamine kinase lolE 2062429 - 2061185 - | lipoprotein releasing system, transmembrane protein LolE lolD 2063130 - 2062429 - | lipoprotein releasing system, ATP-binding protein lolC 2064322 - 2063123 - | lipoprotein-releasing system transmembrane protein LolC SeD_A2152 2064654 - 2064496 - | hypothetical protein TERM 2717 2064686 - 2064672 - g 75 -6.4 -4.58395 | GTTATGCCTGAAAAA CAACGT TAC ACGCTG CCGACAAAAGCGGGC TERM 2718 2065070 - 2065056 - g 90 -5.6 -5.14563 | opp_overlap 2065058, overlap 2065057 2065058 CTGGTGATGAAAAAA GGCCAG CGG CTGTCC CGCGACGCTCTGCGC TERM 2719 2065801 - 2065815 + G 90 -4.2 -5.36441 | overlap 2065775 AGTTCCTCGAATCTT TCAGCG GCC CGGTGA TTTTTTCTGTGGAAA TERM 2720 2066321 - 2066292 - g 82 -11.4 -3.85698 | gap 1, overlap 2066275 2066276 GCGCCGCTGCATAAA CTGGGCG-GCGAC GCCTG GTCGCGCGCCCGG CAGAAAGCGGCGGAA TERM 2721 2066764 - 2066743 - g 70 -6.5 -4.16904 | gap 1, overlap 2066744 AAGAGCAGACACAAA TCCT-GGCGG AAG CCGCCGAGGG TAAGATCGATATTCT TERM 2722 2067144 - 2067132 - g 83 -10.5 -4.01564 | overlap 2067122 GAAAATATTCAGAAA GCCGC AGA GCGGC TGGCGGAACTGGTAC mfd 2064660 - 2068106 + | transcription-repair coupling factor TERM 2723 2068113 - 2068141 + F 72 -10.3 -2.85069 | gap 1, overlap 2068110 2068109 ATTGCATAAGCGTCA GGCCGGGCGTCA TTACTC TG-CGTCCGGCC TAATCTTTACAGATT TERM 2724 2068468 - 2068440 - g 76 -3.2 -5.03314 | gap 1, opp_overlap 2068448, overlap 2068442 GCGATCGCCAAAAAA TATAACGTGGGCT TTTT AGCCCT-GTTACA GGCCAACCCCGGCAT SeD_A2154 2068254 - 2069219 + | LysM domain/ErfK/YbiS/YcfS/YnhG family protein TERM 2725 2069241 - 2069270 + T 100 -15.1 -5.88565 | opp_overlap 2069245, overlap 2069245 ATAGCTGACCGACAA AAAAGCCTCGCGA TGCA TCGCGAGGCTTTC TTTTTTTATTGTGGC TERM 2726 2069245 - 2069266 + T 100 -15.9 -5.33131 | opp_overlap 2069245, overlap 2069241 CTGACCGACAAAAAA GCCTCGCGA TGCA TCGCGAGGC TTTCTTTTTTTATTG TERM 2727 2069266 - 2069245 - T 100 -15.9 -5.28176 | opp_overlap 2069245 2069241 CTGACCGACAAAAAA GCCTCGCGA TGCA TCGCGAGGC TTTCTTTTTTTATTG SeD_A2155 2069573 - 2069316 - | protein YcfR SeD_A2156 2069815 - 2070450 + | transcriptional regulator, TetR family TERM 2728 2070501 - 2070475 - T 100 -10.1 -5.60993 | opp_overlap 2070475 CTTCGGATAAAAAAA GCCCCTCAGCC TGAGC GAATGAGGGGC TAACTTGCAGAGTAC SeD_A2157 2071063 - 2070524 - | surface antigen domain protein TERM 2729 2071234 - 2071203 - R 90 -13.8 -3.42583 | gap 1 GCAAGAGATGGAGAA GCG-CTCACCGGC GCGAGCA GCCGGTGAGGCGC AGAGAAATTAATGCA ndh 2072573 - 2071242 - | NADH dehydrogenase TERM 2730 2072437 - 2072447 + g 89 -3.2 -5.4505 | TTTCTGTCTACCAGC GTGA TTT TCGC TTTTTTCTTGCGCCC TERM 2731 2072613 - 2072574 - R 77 -10.4 -3.41982 | opp_overlap 2072570, overlap 2072562 AAATTTATTAACCAA TTGTTAATTAAAAGTTAT TAGT ATAGCCTTTAATTAACAA CAAGTTACGTTAATG TERM 2732 2072762 - 2072747 - R 100 -10.4 -5.67063 | opp_overlap 2072747 TTGAGCATAAAAAAA CCAGCC GCAA GGCTGG TTATCCGGTCACTGA TERM 2733 2072747 - 2072762 + r 77 -10.4 -3.33492 | opp_overlap 2072747 TTGAGCATAAAAAAA CCAGCC GCAA GGCTGG TTATCCGGTCACTGA SeD_A2159 2073343 - 2072801 - | hypothetical protein nagZ 2074393 - 2073368 - | beta-N-acetylhexosaminidase TERM 2734 2073499 - 2073489 - G 70 -6.8 -4.08706 | opp_overlap 2073489 2073484 CCTTTATGATACAAA CGTG TAA CACG TTCTGCTTTGATCGG thiK 2075228 - 2074404 - | thiamine kinase TERM 2735 2074816 - 2074800 - G 75 -6.5 -4.4078 | CCGCCGCAACCAAAA CGGCG TACGCCT CGCCG GATCGCAACACGACC TERM 2736 2075003 - 2074991 - G 90 -6.2 -5.24129 | CCGGCGTATAAAAAA GCGC TCGCG GCGC AAGACTGGCCGGCAA TERM 2737 2075199 - 2075178 - G 76 -10.9 -3.64984 | gap 1, overlap 2075176 ATACTGGGGAAAATA GCGCGAC-AG GAT CTCGTCGCGC GTTAAGGGATTATTG SeD_A2162 2075847 - 2075209 - | hypothetical protein SeD_A2163 2076235 - 2075861 - | putative outer membrane lipoprotein SeD_A2164 2076615 - 2076238 - | histidine triad nucleotide-binding protein 2 SeD_A2165 2076939 - 2079113 + | FhuE receptor TERM 2738 2079171 - 2079154 - T 100 -12.7 -5.14965 | opp_overlap 2079154, overlap 2079141 2079140 AGCGCCATTAAAAAA GGCAGCC GAAT GGCTGCC TTAATTCTCCCCAAC TERM 2739 2079154 - 2079171 + T 85 -12.7 -3.44146 | opp_overlap 2079141 2079140 2079154 AGCGCCATTAAAAAA GGCAGCC GAAT GGCTGCC TTAATTCTCCCCAAC ptsG 2080631 - 2079198 - | PTS system, glucose-specific IIBC component TERM 2740 2079787 - 2079804 + g 74 -6.9 -4.24002 | opp_overlap 2079787 GCGGAAATCATGATA CCGCCCA CTTT TGCGCGG TTTTCCGGTTTAGCA TERM 2741 2080854 - 2080881 + r 82 -11.2 -3.59627 | opp_overlap 2080851, overlap 2080873 TGTTTCCATAAGCTC GCTCACCGCCCC TTTT GTGGCGGTGAAC TTTACGCGCTTTGCT SeD_A2167 2081723 - 2080926 - | deoxyribonuclease TERM 2742 2081402 - 2081391 - G 71 -7.2 -3.98016 | opp_overlap 2081390 2081391 ATGATGAATAAAAGA CGCC TGCT GGCG GATTTTGGTCTCAGG SeD_A2168 2082738 - 2081734 - | DNA polymerase III subunit delta' TERM 2743 2082114 - 2082082 - G 78 -11.9 -3.16055 | overlap 2082071 CAAACTGTCCATTAA CGCCTGACACAGCGC CTC ACGCTGCGCCCAGCG TTCAGACTGCAACAG TERM 2744 2082682 - 2082699 + g 76 -5.6 -4.72272 | GTGCCCACGTCCCGC CTGGTA ACTTTC TACCAG TTTTTCATAGGCGGG tmk 2083376 - 2082735 - | thymidylate kinase TERM 2745 2082919 - 2082932 + g 83 -9.5 -4.08692 | opp_overlap 2082913 2082914 CGATCCAAATCGCCG CGCGC TCTG GCGCG TTTTAGCCCGACTTC SeD_A2170 2084388 - 2083366 - | hypothetical protein TERM 2746 2083722 - 2083733 + g 75 -3.6 -4.89063 | overlap 2083720 2083719 CCTGATCGCGTTCGC TGGC GACA GCCG TTTCTTTTTCAATAA TERM 2747 2084239 - 2084220 - G 80 -10 -3.96148 | gap 1 TTTTTTCATCATAAA GCTGGTCGC CAA GCG-CCAGC CGCCCCGTTCCCGCC TERM 2748 2084296 - 2084313 + g 77 -11.3 -3.57144 | AATAAGTAACGTGCT GTTCGCC AGAT GGCGAAC TTTCCACATCCCCAC SeD_A2171 2085200 - 2084391 - | aminodeoxychorismate lyase TERM 2749 2085294 - 2085278 - R 87 -7.2 -5.24531 | opp_overlap 2085272 2085278 ATGCCTGATAAAAAA GGCCCG ACAAG CGGACC TTTTTATTAATGTCT TERM 2750 2085278 - 2085294 + r 81 -5 -5.17744 | opp_overlap 2085278, overlap 2085272 ATGCCTGATAAAAAA GGCCCG ACAAG CGGACC TTTTTATTAATGTCT fabF 2086565 - 2085324 - | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 2751 2085896 - 2085921 + g 85 -12.5 -3.51329 | CATCGCGTTCTTTAT CCCACGGACGG CTCG CCGCCTGTGGG TTATCGTTGCGGGTC TERM 2752 2086615 - 2086643 + r 71 -9.6 -3.15056 | gap 1, opp_overlap 2086616 2086618, overlap 2086613 GGACAAAAAGATAAA ACT-CAGGCGGTC GAAC GACCGCCTGGAGA TGTTCACTTACGCCT TERM 2753 2086642 - 2086616 - R 100 -13.1 -5.02287 | gap 1, opp_overlap 2086615 2086613, overlap 2086618 GACAAAAAGATAAAA CT-CAGGCGGTC GAAC GACCGCCTGGAG ATGTTCACTTACGCC TERM 2754 2086639 - 2086618 - R 90 -15.9 -2.72919 | opp_overlap 2086615 2086613, overlap 2086616 CAAAAAGATAAAACT CAGGCGGTC GAAC GACCGCCTG GAGATGTTCACTTAC acpP 2086887 - 2086651 - | acyl carrier protein fabG 2087777 - 2087043 - | 3-oxoacyl-[acyl-carrier-protein] reductase fabD 2088719 - 2087790 - | malonyl CoA-acyl carrier protein transacylase TERM 2755 2088507 - 2088494 - G 71 -9.5 -3.53012 | opp_overlap 2088483 CCTGCTGCTGCCAAA CGCGC CAAA GCGCG ACGGAAGCGGTTAAT TERM 2756 2088527 - 2088544 + g 70 -3.3 -4.74539 | gap 1, overlap 2088527 AAGCGGTTAATAGCG CC-GGCTG CGT CTGCCAGG TTTTATTCAGTTCTT fabH 2089688 - 2088735 - | 3-oxoacyl-[acyl-carrier-protein] synthase 3 plsX 2090847 - 2089768 - | fatty acid/phospholipid synthesis protein PlsX TERM 2757 2090010 - 2090021 + gH 90 -5.8 -5.24129 | TGAGGTGACTGAATC GCCT CGTC AGGC TTTTTTGTAACCAAC SeD_A2178 2090816 - 2091220 + | hypothetical protein SeD_A2179 2091727 - 2091206 - | hypothetical protein TERM 2758 2091795 - 2091767 - H 83 -10.3 -3.74077 | opp_overlap 2091773, overlap 2091773 CGTCATATAGTCAAA GAAAAAGGCAGCC TGC GGTTGCCTTTTGC CAATAATTCGCACAC TERM 2759 2091773 - 2091789 + H 83 -10.1 -4.12902 | opp_overlap 2091767 2091773 ATAGTCAAAGAAAAA GGCAGCC TGC GGTTGCC TTTTGCCAATAATTC TERM 2760 2091789 - 2091773 - H 95 -7.9 -5.31519 | opp_overlap 2091773, overlap 2091767 ATAGTCAAAGAAAAA GGCAGCC TGC GGTTGCC TTTTGCCAATAATTC TERM 2761 2092421 - 2092453 + G 71 -8.3 -3.80018 | TTGAGCGCCTGGAGG GCCGCGATCCGAACA CGC TGATCGGCTTGCCGC TTATTGCTCTGTGCC maf 2091925 - 2092509 + | septum formation protein Maf SeD_A2182 2092804 - 2092580 - | hypothetical protein TERM 2762 2092731 - 2092749 + g 73 -5.9 -4.4009 | AAAGCATTGGTATTA CGAACCG ATGTA CGGTGCG TTTTATCCCATAGGG SeD_A2185 2094864 - 2093905 - | ribosomal large subunit pseudouridine synthase C TERM 2763 2097244 - 2097232 - g 76 -3.3 -5.11112 | AAAGCGGAAGAAAAA GCGGA GCG TCAGC AGGATCGTCGCAAGC SeD_A2187 2095438 - 2098644 + | ribonuclease E TERM 2764 2098663 - 2098680 + T 100 -12.7 -5.25803 | opp_overlap 2098663 AAATGCTGATACAAA GCCGACC GCCA GGTCGGC TTTTTTATGCCCCTT TERM 2765 2098680 - 2098663 - T 95 -12.7 -4.05322 | opp_overlap 2098663 AAATGCTGATACAAA GCCGACC GCCA GGTCGGC TTTTTTATGCCCCTT TERM 2766 2098857 - 2098829 - T 100 -14.6 -5.55664 | TGACGACTAAAAAAA TGCCCGCGCC GGGGTGGAT GGCGCGGGCA GACAAAACATATCCA flgL 2099854 - 2098901 - | flagellar hook-associated protein 3 TERM 2767 2099172 - 2099182 + g 87 -2.4 -5.61881 | TTGGTTTTATCAATG GCGG CAG CGGC TTTTTCTTTTTCCAC flgK 2101530 - 2099869 - | flagellar hook-associated protein FlgK TERM 2768 2101242 - 2101256 + g 81 -8.6 -4.24342 | overlap 2101230 TATCGGCCAGCAGGT TGTCGA TTT TCGACA TTTGTTCATAGCGCG flgJ 2102545 - 2101595 - | flagellar rod assembly protein/muramidase FlgJ TERM 2769 2102026 - 2102037 + g 74 -7.2 -4.20516 | opp_overlap 2102025 CCAGAATCAGATGAT GCGG CACC CCGC TTTGTTCGCTGGCCA TERM 2770 2102095 - 2102127 + g 100 -21.3 -4.24606 | opp_overlap 2102072 GAAAGTCTTTACTGT CGCCGGAGAGCGGCG CAT CGCTGCTGTCCGGCG TTTTCGGTATGGCTT flgI 2103642 - 2102545 - | flagellar P-ring protein FlgI flgH 2104319 - 2103654 - | flagellar L-ring protein FlgH TERM 2771 2104404 - 2104373 - R 75 -11.4 -3.09004 | overlap 2104370 TCATCTTCAAAATCA GGGAGCCGGTGGCG TATC CCCCACCGGCGGCC CCTTAGAGTTGCGTC flgG 2105189 - 2104407 - | flagellar basal-body rod protein FlgG flgF 2105958 - 2105203 - | flagellar basal-body rod protein FlgF TERM 2772 2105864 - 2105823 - G 74 -11.5 -3.18507 | gap 1 AAGAGAGGCCATCAA CGGGCAC-CGCGCGTAGC GCGTTAA GCTGCGCGCGAAAGCCCG GCGTTGAGGCATTAG SeD_A2195 2107190 - 2105979 - | flagellar hook protein FlgE TERM 2773 2106333 - 2106345 + g 85 -9.1 -4.45544 | overlap 2106323 GCTCACCAGGTCGCC CGGCT TAT AGCCG TTTTGATTGGTGGCG SeD_A2196 2107915 - 2107217 - | basal-body rod modification protein FlgD flgC 2108331 - 2107927 - | flagellar basal-body rod protein FlgC flgB 2108751 - 2108335 - | flagellar basal-body rod protein FlgB TERM 2774 2108834 - 2108824 - H 71 -6.8 -4.1552 | TATCGCCGGAATAAA CGCA AAA TGCG TCGCTATTTATTGCG TERM 2775 2108932 - 2108942 + G 74 -8.2 -3.92324 | overlap 2108930 TTAAAACGAGGATTC GCCG TGG CGGC TTTGCTGTTCAGCCC TERM 2776 2109502 - 2109489 - g 77 -8.1 -4.07568 | overlap 2109471 CGCCGTCGCGCAAAA TGCGC GCGT GCGCA TGACATCGGGTCAAA SeD_A2199 2108908 - 2109567 + | flagella basal body P-ring formation protein FlgA TERM 2777 2109766 - 2109741 - g 78 -2.5 -5.24129 | gap 1, overlap 2109756 CGCCGGTACAAAAAA CGCGTCAGGA AAAAACG TCC-GCCGCG ACGAGCGCCAGCGTA TERM 2778 2109769 - 2109756 - g 81 -3.8 -5.14563 | overlap 2109741 CGCGTCAGGAAAAAA CGTC CGCCGC GACG AGCGCCAGCGTAACG SeD_A2200 2109659 - 2109952 + | negative regulator of flagellin synthesis TERM 2779 2110222 - 2110210 - g 76 -3.3 -5.1101 | CGATTACCGAAAAAA CGCAG CAT CTTCG CGACCTCAACCAGCA SeD_A2201 2109987 - 2110379 + | flagella synthesis protein FlgN TERM 2780 2110428 - 2110455 + T 71 -10.7 -2.64472 | gap 1, opp_overlap 2110440, overlap 2110424 CCTGAATGCCTTGTA G-GCCTGATAGC ACAGC GCTATCAGGCAC TGAATTTACGCCGTC mviN 2112035 - 2110461 - | integral membrane protein MviN TERM 2781 2111889 - 2111877 - G 90 -6.2 -5.28826 | overlap 2111865 AAACGCCACAAAAAA GGCG TCGGT CGCC ATCCCTGCGCCAAAA SeD_A2203 2113223 - 2112300 - | oxidoreductase family protein SeD_A2204 2113872 - 2113225 - | protein YceH TERM 2782 2113510 - 2113535 + g 81 -11.8 -3.53012 | opp_overlap 2113499 2113525 TTCATGCATCCGCGA CGCCCGGCTA CGCAAC TCGCCGGGCG TTTGCGCGCCGCGCA SeD_A2205 2114492 - 2113908 - | ribosomal-protein-alanine acetyltransferase SeD_A2206 2114729 - 2115937 + | multidrug resistance protein MdtH TERM 2783 2116150 - 2116138 - g 74 -7.7 -4.10161 | GATGATTGGTCAAAA GATGG TGC CCATC CTGCAAAAAGATGAT grxB 2116001 - 2116648 + | glutaredoxin, GrxB family TERM 2784 2116658 - 2116680 + F 100 -10.6 -4.7657 | opp_overlap 2116649 ATCTAACTCCCGCCA GGCGGCAA CCCTTTC TTGCCGCC TTTTTCAGCTTTTTC TERM 2785 2116701 - 2116729 + F 76 -8.2 -4.0492 | gap 1 CAGCTTTTTCTAGTG GCACCATGTCCGC TGGC GCG-ACATGCTGC TTTGTGTCAAGATTA SeD_A2208 2116773 - 2117333 + | putative lipoprotein TERM 2786 2117341 - 2117356 + F 100 -11.8 -5.81412 | CCAATTGATTTCGGA GGGCGC GCTC GCGCCC TTTTTTTTACGTGCA TERM 2787 2117894 - 2117904 + G 81 -8.2 -4.37092 | overlap 2117893 GTTGATATCTTCGAT CGCG AAG CGCG TTTTATCGACACCGT pyrC 2117438 - 2118484 + | dihydroorotase, homodimeric type SeD_A2210 2118558 - 2118803 + | DNA damage-inducible protein I, inhibits UmuD processing TERM 2788 2118830 - 2118845 + F 100 -11.8 -5.63517 | CAGTGATGTATGTTT GCCGGG TCGC CCCGGC TTTTTTATTTGCGCA SeD_A2211 2119090 - 2119347 + | hypothetical protein TERM 2789 2119371 - 2119386 + F 71 -10.4 -2.73799 | overlap 2119368 2119367 GCTCCCCCTCTCTCA GGCACC GTAA GGTGCC TCACTTATTTCTGGC TERM 2790 2119849 - 2119868 + G 80 -12.2 -3.36694 | overlap 2119846 GCCGGAAATTCGCGT GCCCGATA ATTA TATCGGGC TGTTTGAAGCTGACT TERM 2791 2120342 - 2120358 + G 71 -7.9 -3.96216 | opp_overlap 2120342 TTCCTGCGTAACGTA CTGCCGG GTA TCGGCGG TTGTTTACATGGGGC SeD_A2212 2119460 - 2120578 + | N-methyl-l-tryptophan oxidase TERM 2792 2120584 - 2120602 + F 83 -9.5 -4.1822 | TAGCCAATAATTTGT CGGCCCC GTAAA GGGGCTG TTTATTAAGGTAACC SeD_A2213 2120619 - 2120732 + | hypothetical protein SeD_A2214 2120984 - 2120781 - | hypothetical protein SeD_A2215 2120995 - 2121567 + | YceJ TERM 2793 2121769 - 2121758 - g 85 -2.2 -5.52384 | overlap 2121760 TTTTGACGAAAAAAA TCCG TCGG CAGA CAAAGTGAACGTGAC SeD_A2216 2121564 - 2122139 + | protein YceI TERM 2794 2122185 - 2122152 - T 100 -16.8 -3.53761 | opp_overlap 2122146 2122149 2122147 2122152 TAACGCCTGGCGAAA TGCCGGATAGCGGC CTTTAC GCTGCTATCCGGCA AAATATTACTCAGCC SeD_A2217 2123243 - 2122191 - | protein YceA SeD_A2218 2123463 - 2124383 + | lipid A biosynthesis lauroyl acyltransferase TERM 2795 2124408 - 2124389 - f 78 -12.2 -2.64616 | opp_overlap 2124389 GCGCTATTGACAGGA TTGCAGCC GTCA GGCTGCAA TTTTTCCCCTCTTTT TERM 2796 2124389 - 2124408 + F 100 -12.2 -4.69464 | opp_overlap 2124389 GCGCTATTGACAGGA TTGCAGCC GTCA GGCTGCAA TTTTTCCCCTCTTTT SeD_A2219 2124538 - 2125752 + | multidrug resistance protein MdtG SeD_A2220 2125834 - 2126208 + | acidic protein MsyB SeD_A2221 2126412 - 2126209 - | hypothetical protein TERM 2797 2126462 - 2126480 + r 93 -10.3 -4.62783 | opp_overlap 2126462 ATTTCACTATAAAAA TACCGGC ATCAC GCCGGTA TTTTTCACCTCACTC TERM 2798 2126480 - 2126462 - R 100 -11 -4.91511 | opp_overlap 2126462 ATTTCACTATAAAAA TACCGGCA TCA CGCCGGTA TTTTTCACCTCACTC SeD_A2222 2129053 - 2126510 - | glucans biosynthesis glucosyltransferase H TERM 2799 2128055 - 2128080 + g 73 -6.1 -4.37711 | opp_overlap 2128066 CTGATTGCCCCAGCG GCGGCAAAAAT CGTC AATATTGCCGC TTTTGCGTTTCATAC TERM 2800 2128641 - 2128666 + g 72 -3.9 -4.7497 | opp_overlap 2128641, overlap 2128642 ATTAACAAAATATAG CGGCGTATAGT GCCG ACGGTACGCCA TTTTTGCTCGCTCGC TERM 2801 2128946 - 2128983 + g 77 -8.6 -4.09685 | gap 3, opp_overlap 2128938, overlap 2128951 CGAGTAAGTCCGATG CTCGGCATCCAGCGCC-TG ATG CACGGCGC-GGATGTC-AG TTTTCGGCAATGCCG mdoG 2130599 - 2129046 - | glucans biosynthesis protein G SeD_A2224 2130853 - 2132007 + | glucans biosynthesis protein C SeD_A2225 2133328 - 2132024 - | phopholipase D TERM 2802 2132068 - 2132098 + g 83 -8.2 -4.42464 | opp_overlap 2132085 CCGCCAACCGTACCA GAACTCGCTGCCAG AAA CGCGTAGCGGGTTC TTTCTTTAACACCTT TERM 2803 2132220 - 2132205 - G 74 -7.6 -4.07568 | opp_overlap 2132197 TGGCTCTGCGTAAAA CGCTTA TGAA TAAGCG TCGCCAGCGTTTCAC TERM 2804 2133427 - 2133441 + r 76 -7.8 -4.36914 | ATAGCGGTTCAACGG CACGCT CCA GGCGTG TTTTATCAGGCAGGG SeD_A2226 2133986 - 2133447 - | protein YmdB SeD_A2227 2134393 - 2134073 - | putative periplasmic protein SeD_A2228 2134850 - 2134524 - | curli production protein CsgC TERM 2805 2134871 - 2134886 + r 100 -10.4 -5.7946 | opp_overlap 2134871 CCTCCCGAAAAAAAA CAGGGC TTAT GCCCTG TTTTTTTATTAGCGC TERM 2806 2134886 - 2134871 - R 100 -10.4 -5.75342 | opp_overlap 2134871 CCTCCCGAAAAAAAA CAGGGC TTAT GCCCTG TTTTTTTATTAGCGC SeD_A2229 2135367 - 2134912 - | major curlin subunit csgB 2135864 - 2135409 - | minor curlin protein CsgB TERM 2807 2136294 - 2136282 - H 72 -4.9 -4.60317 | ACACAATAATTAAAA TGATT AAA AATCA ATGAATTATTATAAT TERM 2808 2136480 - 2136493 + H 73 -2.5 -5.24799 | opp_overlap 2136480 GAAAACAGTTAAAAG TATTT TCGT AAATA TTTTTCTCTTTCTGG TERM 2809 2136876 - 2136855 - g 73 -5.3 -4.62471 | opp_overlap 2136855 TTTAAGCCGCAAAAA CAATAATAT AAAA ACATTATTG TTAAATACCCCTGAC csgD 2136619 - 2137269 + | transcriptional regulator CsgD SeD_A2232 2137274 - 2137669 + | curli production assembly/transport component CsgE SeD_A2233 2137696 - 2138112 + | curli production assembly/transport component CsgF SeD_A2234 2138139 - 2138972 + | curli production assembly/transport component CsgG TERM 2810 2138986 - 2139006 + T 100 -14 -5.86976 | opp_overlap 2138986 GATGAATACGACAAA GCGTGGGG AAGAA CCCCACGC TTTTTTATTTTGTGA TERM 2811 2139006 - 2138986 - T 100 -14 -4.07455 | opp_overlap 2138986 GATGAATACGACAAA GCGTGGGG AAGAA CCCCACGC TTTTTTATTTTGTGA SeD_A2235 2139523 - 2139011 - | inner membrane protein YcdZ TERM 2812 2139203 - 2139193 - G 74 -3.2 -4.87892 | CCGGAACAAAAGAAA GCAA TAG CTGC TTTGCCTGGATACAC SeD_A2236 2140148 - 2139594 - | chaperone, TorD family SeD_A2237 2140909 - 2140172 - | putative hydrolase TERM 2813 2140306 - 2140272 - G 80 -8.7 -4.08216 | gap 1, opp_overlap 2140262 CGATCTTCCGGAAAA TTCACCGCAT-CCAGA ATTT TCCGGCATTCGGTGAA ATCGCCAAGCGTAAA TERM 2814 2140972 - 2140987 + rH 79 -11.8 -3.28912 | opp_overlap 2140946 2140972 CGTTTTTTAGCGAAA CCCGGC CCGC GCCGGG TTGATGTCAATATCC TERM 2815 2140987 - 2140972 - RH 86 -11.8 -3.64703 | opp_overlap 2140972, overlap 2140946 CGTTTTTTAGCGAAA CCCGGC CCGC GCCGGG TTGATGTCAATATCC SeD_A2239 2141932 - 2140994 - | putative 2-hydroxyacid dehydrogenase YcdW SeD_A2238 2141931 - 2142095 + | hypothetical protein TERM 2816 2142270 - 2142289 + FH 100 -10 -4.9755 | ATATCTAAGTTGAGA GCCTGTAC AGAA GTACGGGC TTTTTGCTTATATGT TERM 2817 2142454 - 2142473 + FH 100 -10 -5.01845 | ATATTTAAGTTGAGA GCCTGTAC AGAA GTACGGGC TTTTTGCTTATTATG SeD_A2241 2143127 - 2143276 + | transposase TERM 2818 2143389 - 2143379 - T 72 -3.2 -4.91511 | AGGCCAGTATAAAAA TCAG GTT CCGA TTGTGCAGGTGCAAC SeD_A2242 2144816 - 2143449 - | transposase //family protein TERM 2819 2143520 - 2143534 + g 95 -11.4 -4.67982 | TCGCGTTTTTGTTAG CGACCG CCA CGGTCG TTTTATTAAATCCGC TERM 2820 2143790 - 2143801 + g 74 -7.2 -4.08216 | opp_overlap 2143790 2143791 CAATAGCAGCAACAA CGGC CGTG GCCG TTTTAGGACCAATGC SeD_A2243 2145751 - 2144933 - | hypothetical protein TERM 2821 2145443 - 2145417 - G 91 -11.6 -4.25283 | overlap 2145418 AGTTCTGTATCAAAA CCATCACTTCCC ATT GGGTAGTGATGA AACACATACTGCGTA TERM 2822 2145442 - 2145418 - G 81 -12.9 -3.14848 | overlap 2145417 GTTCTGTATCAAAAC CATCACTTCCC ATT GGGTAGTGATG AAACACATACTGCGT SeD_A2245 2147315 - 2147094 - | hypothetical protein TERM 2823 2147398 - 2147383 - H 74 -3.3 -4.93547 | CTAACCAAGTAAAAA CTATC GTTTCA GATAG CTATGGCACGAAAAT TERM 2824 2148098 - 2148113 + G 91 -2.6 -5.7946 | GGACATGTACGGTTT GATTTT TACA GAAATC TTTTTTTATTAAAAG SeD_A2246 2147528 - 2148535 + | NleB SeD_A2247 2148685 - 2148536 - | gp21 TERM 2825 2148812 - 2148794 - R 100 -11.7 -5.32396 | opp_overlap 2148791 2148790 ACAGGAAAAAGAAAA GGCGGGT AATAA ACCCGCC TGAATATTTAGCGTG SeD_A2248 2149389 - 2148820 - | caudovirales tail fibre assembly protein SeD_A2249 2150951 - 2149389 - | tail protein TERM 2826 2149823 - 2149859 + g 100 -5.1 -5.53288 | ATAAATTAAACGTGG CTGTCATTGTCGAATTA TTA TTGCTCGTCAGTGACAG TTTTTTTGCGTTGCC TERM 2827 2150675 - 2150697 + g 90 -4.8 -5.40072 | GAAACAGCGGCTTAT TCGGGATGTC CGC GCCATTCTGA TTTTTTTCAAGACGG SeD_A2250 2151525 - 2150938 - | tail protein SeD_A2251 2152607 - 2151528 - | tail protein TERM 2828 2151852 - 2151816 - G 72 -3.6 -4.68908 | overlap 2151818 2151819 GGCAGCGAAAACAAA GAGTCCGCCGCCAGCA ACAGG TGCCAGCGGCAAAATA TGGTCACGTACAGCC SeD_A2252 2153013 - 2152600 - | phage protein GP46 TERM 2829 2152874 - 2152898 + g 72 -12.2 -2.66435 | gap 1, opp_overlap 2152862 GCAGGCCAGGTGTCC CCCCACCAGCC GTAT GGCTG-TGGGG TCCTGTCATCCCGCT SeD_A2253 2153551 - 2153018 - | bacteriophage Mu Gp45 protein SeD_A2255 2155945 - 2154605 - | tail/DNA circulation protein TERM 2830 2155249 - 2155270 + g 75 -5.7 -4.63184 | ATGTACTGCCCCTGA GCCTGTCAC CTGA GCGCCAGGC TTTTTGCAGTGCGTT TERM 2831 2155964 - 2155977 + r 74 -8.1 -4.00782 | opp_overlap 2155964 TACCCCATAAGAAAA CCTGC CGGA GCAGG TTTATCGTGATGTAC TERM 2832 2155977 - 2155964 - R 88 -8.1 -4.78237 | opp_overlap 2155964 TACCCCATAAGAAAA CCTGC CGGA GCAGG TTTATCGTGATGTAC SeD_A2256 2157907 - 2155979 - | tail protein TERM 2833 2156444 - 2156419 - G 76 -10.3 -3.64599 | overlap 2156412 CCAGCAGACCGGAAA GCCGTCCGGCC AGCA GGACGGACTGC TGCAGGGCACCAATG TERM 2834 2156881 - 2156897 + g 74 -4.3 -4.73682 | overlap 2156873 2156882 CATTGACGCTGTTTT TCAGCAG AAC CAGCTGG TTTTCTGTTGTGGCC SeD_A2257 2158318 - 2157992 - | hypothetical protein TERM 2835 2158075 - 2158065 - G 86 -4 -5.41143 | GACCGGGTAAAAAAA TTGA GGA TCAA CATACAGGCTTTGAA SeD_A2258 2158671 - 2158315 - | tail tube protein SeD_A2259 2160167 - 2158671 - | bacteriophage Mu tail sheath protein TERM 2836 2159250 - 2159240 - G 77 -4.6 -4.87665 | overlap 2159242 CGTTACGGATAAAAA CCGC AGC ACGG GCAGTACGGCTTGCA TERM 2837 2159834 - 2159866 + g 76 -11.9 -3.14344 | opp_overlap 2159860 TCACCGTTCCGGTTT CCGTCGCTTCGCCAG TTA CCGTCAAAGCGACGG TTGCTGCCGCGCCTG SeD_A2260 2160321 - 2160157 - | hypothetical protein TERM 2838 2160277 - 2160300 + g 74 -7.4 -4.17089 | gap 1 TAAAAGGTCGCCACG GGCCGGATCGG GAA CCGAT-CGCCC TTTTGCGGGTTTCAC SeD_A2261 2160885 - 2160325 - | hypothetical protein SeD_A2262 2161394 - 2160882 - | hypothetical protein SeD_A2263 2161770 - 2161366 - | putative phage head-tail adaptor SeD_A2264 2162090 - 2161767 - | hypothetical protein SeD_A2265 2162293 - 2162093 - | hypothetical protein TERM 2839 2162335 - 2162316 - R 81 -12.8 -3.21924 | overlap 2162314 TCACCTGTCAGAACA GGGGCGCC GTTC AGCGCCCC ACCAGTGATTACGCC SeD_A2266 2163549 - 2162344 - | phage major capsid protein, HK97 family TERM 2840 2162441 - 2162423 - G 78 -6 -4.82901 | opp_overlap 2162427 TTGGTGGTATAAAAA CCGACAAA CGG TTTGTTGG TGTACGGGTCGCGCA TERM 2841 2163286 - 2163297 + g 71 -5.8 -4.27117 | overlap 2163258 TTTACGCAGAAAGCC GACG AAAG CGTC TTTATGTTCTGCAGC TERM 2842 2163669 - 2163703 + r 86 -2.7 -5.80817 | overlap 2163670 2163675 TGCTTTGGCCTGGGT ACGGGAGAGTCCGAC ATCAC GCAGGACTCTTTCGA TTTTTTTCTGTTCGG TERM 2843 2163900 - 2163881 - R 100 -13.6 -4.21607 | opp_overlap 2163881 CGTACCCAATAGAAA GGCCGGTT AACG AACCGGCC TTCATGTGTGCATGT TERM 2844 2163881 - 2163900 + r 90 -13.6 -3.33261 | opp_overlap 2163881 CGTACCCAATAGAAA GGCCGGTT AACG AACCGGCC TTCATGTGTGCATGT SeD_A2269 2165433 - 2164192 - | phage portal protein, HK97 family TERM 2845 2165323 - 2165292 - G 78 -2.2 -5.1675 | gap 1, opp_overlap 2165294, overlap 2165294 TGACGCAGGAAAAAA CCGCCGTCAGTCG CATGGCC CG-CTGACTGCTG ATCTGCTTTCCGGTA SeD_A2270 2165615 - 2165433 - | hypothetical protein SeD_A2271 2167360 - 2165627 - | putative phage terminase, large subunit SeD_A2272 2167851 - 2167357 - | putative phage terminase, small subunit, P27 family SeD_A2273 2168328 - 2167978 - | HNH endonuclease SeD_A2274 2168755 - 2168456 - | hypothetical protein SeD_A2275 2169808 - 2169416 - | putative Rz lytic protein SeD_A2276 2170268 - 2169792 - | lysozyme SeD_A2277 2170619 - 2170272 - | phage holin, lambda family TERM 2846 2170711 - 2170732 + r 80 -5.7 -5.00765 | opp_overlap 2170713, overlap 2170713 GCGTAGTGCACAAAA AAGGCCGCC CACA GGCAGCCTC TTTTTATAATTCATT TERM 2847 2170730 - 2170713 - R 100 -10.5 -5.26316 | opp_overlap 2170711 2170713 GTAGTGCACAAAAAA GGCCGCC CACA GGCAGCC TCTTTTTATAATTCA TERM 2848 2170713 - 2170730 + r 76 -8.3 -4.11322 | opp_overlap 2170713, overlap 2170711 GTAGTGCACAAAAAA GGCCGCC CACA GGCAGCC TCTTTTTATAATTCA TERM 2849 2171085 - 2171095 + r 87 -6.8 -5.24129 | TCAAAATGAGCGTAG CTGG CTG CCAG TTTTTTGTACAACAC TERM 2850 2171172 - 2171159 - R 86 -5.2 -5.5353 | opp_overlap 2171159 2171162 GACATCAATAAAAAA CCGC TCGGTG GCGG GTTCTTGAAGATTAT TERM 2851 2171209 - 2171233 + r 70 -2.1 -5.02074 | opp_overlap 2171207, overlap 2171211 TAGACACACAAAGCC CATCGTTAGGG GAA TCCTAACCATA TTTTTTGAAAAGTGC SeD_A2278 2172034 - 2171282 - | antitermination protein SeD_A2279 2173043 - 2172048 - | putative cytoplasmic protein TERM 2852 2172964 - 2172943 - G 70 -10.1 -3.32946 | opp_overlap 2172943, overlap 2172941 2172944 GGTTCAAGCAGAACA CGCCCCTGC ATAA ACAGGGGCA TCAGTTCCGATCCCG SeD_A2280 2173905 - 2173045 - | KilA-N domain protein SeD_A2281 2174311 - 2173922 - | holiday-junction resolvase SeD_A2282 2175201 - 2174320 - | retron EC67 DNA adenine methylase TERM 2853 2174570 - 2174558 - G 74 -6.9 -4.3534 | opp_overlap 2174562 GCGTAATGAGTAAAA CCAGC CGT GCCGG GCATCGGTTCGTAGG TERM 2854 2174818 - 2174799 - G 79 -7.8 -4.41494 | GACGGTTAAGGAAAA GGAAAGCG GCGG CGCGTTCC GGTCCGTCCATCACC SeD_A2283 2175671 - 2175198 - | Sb43 SeD_A2284 2176642 - 2175668 - | hypothetical protein TERM 2855 2176282 - 2176238 - G 93 -15.8 -3.14132 | opp_overlap 2176208 2176207 2176239 GCGGGGTTGCACCAA TCCAGATTGCGGGGTTTCCA CATTC TGGAAGTCCCGCAATCTGGT TTTCTCCTGAGCGCC TERM 2856 2176239 - 2176281 + g 100 -23.7 -4.46212 | opp_overlap 2176238, overlap 2176208 2176207 CGGGGTTGCACCAAT CCAGATTGCGGGGTTTCCA CATTC TGGAAGTCCCGCAATCTGG TTTTCTCCTGAGCGC TERM 2857 2176640 - 2176666 + g 87 -8 -4.56597 | opp_overlap 2176638 2176642 TTGAATAAGGGAACT CATGCAGCACCT CCG AGATGCTTCATG TTTTTGCCGGAACGA SeD_A2285 2176863 - 2176639 - | hypothetical protein SeD_A2286 2178002 - 2176860 - | putative antirepressor TERM 2858 2177233 - 2177254 + g 75 -13.1 -2.52464 | GCGTCGATGTACTCA CTGAGCTGA AAAT TCAGCTCAG TAAATTCGGCAGAGC TERM 2859 2177591 - 2177578 - G 100 -5.9 -5.5112 | TGTAGCAACAAAAAA GACGC TAAC GCGCC CATTGTCGCCGTATG SeD_A2287 2178553 - 2177999 - | hypothetical protein TERM 2860 2178498 - 2178521 + g 71 -6 -4.24404 | gap 1, opp_overlap 2178509 2178510, overlap 2178510 ATCGTCTTTTTAATC GCAGCCACC AACCAGC GG-GGCTGC TTTTCAACTTTCCAT SeD_A2288 2178806 - 2178582 - | hypothetical protein TERM 2861 2178945 - 2178931 - H 75 -10 -3.48772 | AACCGTGTCAGACAA CTTCGC CGC GCGAAG AACATGAAAATTGCT TERM 2862 2179634 - 2179616 - H 70 -8.8 -3.32562 | opp_overlap 2179617, overlap 2179617 AGAAAGCGTCGACAA GGCCACCA TTA TGGTGGCT TTTTTTTAACTCAAA TERM 2863 2179617 - 2179633 + H 100 -12.3 -5.81412 | opp_overlap 2179616 2179617 GAAAGCGTCGACAAG GCCACCA TTA TGGTGGC TTTTTTTTAACTCAA TERM 2864 2179633 - 2179617 - H 78 -12.3 -2.59055 | opp_overlap 2179617, overlap 2179616 GAAAGCGTCGACAAG GCCACCA TTA TGGTGGC TTTTTTTTAACTCAA TERM 2865 2179651 - 2179688 + H 72 -8.5 -3.75229 | opp_overlap 2179651, overlap 2179684 TTTTTTAACTCAAAA TTGCACATATCGCAATT TTAT ACTTGCGCAATGTGCAA TTTAAATGTAATTTG TERM 2866 2179688 - 2179651 - H 79 -8.5 -4.27316 | opp_overlap 2179651 2179684 TTTTTTAACTCAAAA TTGCACATATCGCAATT TTAT ACTTGCGCAATGTGCAA TTTAAATGTAATTTG TERM 2867 2180030 - 2180011 - g 77 -4.3 -4.94058 | gap 1, opp_overlap 2180011 TTAATGCAAAGAAAA GCGCC-AT CACCC ATCGGCGC TTTAAGGGAAATGAA SeD_A2290 2179917 - 2180168 + | hypothetical protein SeD_A2291 2180608 - 2180363 - | hypothetical protein TERM 2868 2180598 - 2180612 + g 70 -2.9 -4.75518 | overlap 2180590 TCAAGTTCTTTTTCA TCAAA AGTCA TTTGA TTTTCCTTTTATGTA SeD_A2293 2181161 - 2180598 - | hypothetical protein TERM 2869 2181111 - 2181128 + gH 75 -11.3 -3.04322 | opp_overlap 2181110 2181106 2181111 TGTGGAGAAACCAAC TGGCGGT GGCA ACCGCCA TCTTGAGGGGTTAAC TERM 2870 2181128 - 2181111 - GH 74 -11.3 -2.75997 | opp_overlap 2181111, overlap 2181110 2181106 TGTGGAGAAACCAAC TGGCGGT GGCA ACCGCCA TCTTGAGGGGTTAAC SeD_A2292 2181160 - 2181516 + | hypothetical protein TERM 2871 2181521 - 2181505 - fH 79 -10.1 -3.72363 | GACGGAAAGCTTAAA GCGGCTC AGT GAACCGC AGCTAACCAATTCAC SeD_A2294 2181574 - 2182401 + | hypothetical protein TERM 2872 2182402 - 2182449 + F 83 -10.7 -3.78235 | opp_overlap 2182417 2182444, overlap 2182417 AACTTTAAAGCGTAA TTGCTCTGCATTAAATCCCCG GCGCCG CGGGGATTTATTGAAGCGTAA TTCTGTTAATTATCG TERM 2873 2182434 - 2182417 - f 72 -8.4 -3.72576 | opp_overlap 2182417 2182402 TTGCTCTGCATTAAA TCCCCG GCGCCG CGGGGA TTTATTGAAGCGTAA TERM 2874 2182417 - 2182434 + F 76 -8.4 -4.16016 | opp_overlap 2182417, overlap 2182402 TTGCTCTGCATTAAA TCCCCG GCGCCG CGGGGA TTTATTGAAGCGTAA SeD_A2295 2182538 - 2183077 + | hypothetical protein SeD_A2296 2183148 - 2183885 + | hypothetical protein SeD_A2297 2183882 - 2184358 + | DNA N-4 cytosine methyltransferase M.NgoMXV SeD_A2298 2184362 - 2185111 + | Eaa1 SeD_A2299 2185108 - 2185677 + | endodeoxyribonuclease SeD_A2300 2185717 - 2185944 + | hypothetical protein TERM 2875 2186276 - 2186260 - g 73 -5.8 -4.40298 | opp_overlap 2186260 AGCTAAAGCAATAAA GCCAGA ACATA TCCGGC GTTATATGGATGCCC TERM 2876 2186332 - 2186304 - g 91 -7.4 -5.00616 | opp_overlap 2186304 CCCGTGGGCAAAAAA GCCGTGTCCAGG CGAAT CATGAACACAGC TCTATGTCGCGCGTA SeD_A2301 2185946 - 2186935 + | integrase protein TERM 2877 2186949 - 2186968 + F 91 -6.4 -5.60993 | GAGCTTTTCGATGTG CGCCAG TTAAAATT CTGGCG TTTTTTTCTCACCGA SeD_A2303 2187227 - 2188024 + | hypothetical protein TERM 2878 2188208 - 2188237 + F 83 -13.7 -2.73529 | opp_overlap 2188212, overlap 2188204 2188212 AGGAGCCAAATTTAG GGAAGCAGACGTT CAGT GACGTCTGCTTTC TGCATTTATATCAAC TERM 2879 2188212 - 2188233 + F 89 -10.9 -4.04922 | opp_overlap 2188212, overlap 2188208 2188204 GCCAAATTTAGGGAA GCAGACGTT CAGT GACGTCTGC TTTCTGCATTTATAT TERM 2880 2188233 - 2188212 - f 73 -10.2 -3.11732 | opp_overlap 2188212 2188208 2188204 GCCAAATTTAGGGAA GCAGACGT TCAGTG ACGTCTGC TTTCTGCATTTATAT SeD_A2305 2188380 - 2189654 + | integrase TERM 2881 2189720 - 2189695 - T 90 -6.9 -5.40004 | gap 1, opp_overlap 2189697, overlap 2189697 CATTAAATCAAAAAA TACAGGGAG-GT TTT ACTCTCCCTGTT ACTTATCACTTACGC TERM 2882 2189718 - 2189697 - T 87 -9.5 -4.31698 | gap 1, opp_overlap 2189697, overlap 2189695 TTAAATCAAAAAATA CAGGGAG-GT TTT ACTCTCCCTG TTACTTATCACTTAC TERM 2883 2189697 - 2189718 + T 73 -9.5 -3.47403 | gap 1, opp_overlap 2189697 2189695 TTAAATCAAAAAATA CAGGGAG-GT TTT ACTCTCCCTG TTACTTATCACTTAC SeD_A2306 2189977 - 2189726 - | exported protein TERM 2884 2189759 - 2189778 + g 80 -12.2 -3.37344 | opp_overlap 2189758 2189763, overlap 2189763 TGATTGTGCCAATAC CGAAGCAG CAAG CTGCTTCG TTAATTCGCTAGAGC SeD_A2307 2190953 - 2190456 - | hypothetical protein TERM 2885 2190501 - 2190511 + g 81 -4 -5.27938 | overlap 2190505 ATTTTCCAGTTCATC CATT GAA AATG TTTTTCTTTCGGAGT SeD_A2308 2191878 - 2191315 - | hypothetical protein SeD_A2309 2192058 - 2191945 - | hypothetical protein TERM 2886 2192547 - 2192536 - g 72 -2.2 -4.96435 | TTAATAAAAAAATAA CAGC AAAA ACTG GAGACTTACACCGTT SeD_A2310 2192289 - 2193170 + | TIR protein TERM 2887 2193209 - 2193195 - T 73 -10 -3.30781 | TTAAGCGAAAGGGAA CTCTCC ATT GGAGAG AATACATATCACTTG TERM 2888 2195592 - 2195576 - T 89 -9.4 -4.70266 | opp_overlap 2195576 AATATGATCCAAAAA GGGGCA TAAAG TGCCCC TTTAATTAAATAGAC TERM 2889 2195576 - 2195592 + T 80 -10.1 -3.93288 | opp_overlap 2195576 AATATGATCCAAAAA GGGGCAT AAA GTGCCCC TTTAATTAAATAGAC SeD_A2312 2196155 - 2195598 - | putative type IV pilin protein TERM 2890 2196077 - 2196058 - G 80 -5 -4.87592 | gap 1 GGATACACAATAAAA GCCGCTACT ACT AAT-GCGGC AATAATCCCCAGAAC TERM 2891 2196272 - 2196291 + r 87 -10.8 -4.12942 | opp_overlap 2196272 GGATGAATTGAAAAA GGCAAAGA TCGC TCTTTGCC TTTTGGGAGATTTAA TERM 2892 2196291 - 2196272 - R 100 -10.8 -4.7629 | opp_overlap 2196272 GGATGAATTGAAAAA GGCAAAGA TCGC TCTTTGCC TTTTGGGAGATTTAA SeD_A2313 2196868 - 2196563 - | hypothetical protein TERM 2893 2198596 - 2198569 - g 70 -7 -4.19817 | CCCATCTATTCAAAA CACCAGAGCG AAGAACCG CGCTCCGATG AGGAGTAGGAAACAG SeD_A2314 2197505 - 2199025 + | MobA/MobL family protein SeD_A2315 2199939 - 2199049 - | hypothetical protein SeD_A2316 2200304 - 2200125 - | hypothetical protein SeD_A2317 2200929 - 2200399 - | hypothetical protein SeD_A2318 2201154 - 2201017 - | hypothetical protein TERM 2894 2201144 - 2201090 - G 70 -6.9 -4.10657 | opp_overlap 2201082 2201099, overlap 2201100 2201103 2201104 2201105 2201133 2201138 TCATATCGTTTAAAA CGATCAAA-AACAATCTTATGATAGTT TTT AACTATCATAA-ATAGATATTCGATCG ATAATAACAATTAAT TERM 2895 2201133 - 2201100 - G 83 -6.3 -4.86773 | gap 1, opp_overlap 2201082 2201099, overlap 2201090 2201103 2201104 2201105 TAAAACGATCAAAAA CAATCTTATGATAGTT TTT AACTATCATAA-ATAG ATATTCGATCGATAA TERM 2896 2201131 - 2201103 - G 75 -6.9 -4.50218 | opp_overlap 2201082 2201099, overlap 2201100 2201090 2201104 2201105 AACGATCAAAAACAA TCTTATGATAGTT TTT AACTATCATAAAT AGATATTCGATCGAT TERM 2897 2201130 - 2201104 - G 71 -10.4 -3.28504 | opp_overlap 2201082 2201099, overlap 2201103 2201100 2201090 2201105 ACGATCAAAAACAAT CTTATGATAGTT TTT AACTATCATAAA TAGATATTCGATCGA TERM 2898 2201129 - 2201105 - G 72 -11.7 -2.56018 | opp_overlap 2201082 2201099, overlap 2201104 2201103 2201100 2201090 CGATCAAAAACAATC TTATGATAGTT TTT AACTATCATAA ATAGATATTCGATCG TERM 2899 2201322 - 2201312 - H 71 -6.8 -4.08579 | ATAAAACGAAGCAAA GCTC TGT GAGC GGGTTCAGTCTCTTT SeD_A2319 2201364 - 2201837 + | hypothetical protein SeD_A2320 2202080 - 2202247 + | hypothetical protein TERM 2900 2202328 - 2202273 - T 79 -8.6 -4.26076 | gap 1, opp_overlap 2202272 2202283 2202285 2202289 2202320, overlap 2202289 TTATTTTTATGAAAA CTAACTTCAT-GAGTAAGATCATTTCC CAA GGAAGTGATCTTACTCTATATGATTAG ATTATATTCTTTCTA TERM 2901 2202283 - 2202317 + T 100 -19.6 -3.01984 | opp_overlap 2202273 2202289, overlap 2202272 2202285 2202289 GAAAACTAACTTCAT GAGTAAGATCATTTCC CAA GGAAGTGATCTTACTC TATATGATTAGATTA TERM 2902 2202285 - 2202315 + T 100 -16.4 -3.05914 | opp_overlap 2202273 2202289, overlap 2202283 2202272 2202289 AAACTAACTTCATGA GTAAGATCATTTCC CAA GGAAGTGATCTTAC TCTATATGATTAGAT TERM 2903 2202289 - 2202311 + T 79 -11.4 -3.36313 | opp_overlap 2202273 2202289, overlap 2202285 2202283 2202272 TAACTTCATGAGTAA GATCATTTCC CAA GGAAGTGATC TTACTCTATATGATT SeD_A2321 2203935 - 2202325 - | hypothetical protein SeD_A2322 2204949 - 2203987 - | hypothetical protein SeD_A2323 2205189 - 2205329 + | hypothetical protein SeD_A2324 2205707 - 2205847 + | hypothetical protein TERM 2904 2206081 - 2206101 + F 86 -11.3 -3.72576 | TAGTAGCAGCACTTC GTGATTGTT GCC AACAATCAC TTTGCTGGACAGGGC TERM 2905 2206583 - 2206603 + F 86 -11.3 -3.72576 | TGGTAGCAGCACTTC GTGATTGTT GGC AACAATCAC TTTGCTGGACAGGGC TERM 2906 2206722 - 2206742 + F 75 -11.3 -3.09635 | opp_overlap 2206713 TAAAAGCAGCGGTTC GTGATTGTT CGA AACAATCAC TTCGCTGATAGCAGT TERM 2907 2206961 - 2206917 - f 87 -11 -3.93262 | opp_overlap 2206916 2206933 2206943, overlap 2206918 2206931 TTCGAACATAGCAAA CTCCTATGTTCAAACATAGA TCCGT CCTATGTTCGAACATAGCAA GATCTATGTTCGAAC TERM 2908 2206960 - 2206918 - f 80 -12.3 -2.95475 | opp_overlap 2206916 2206933 2206943, overlap 2206917 2206931 TCGAACATAGCAAAC TCCTATGTTCAAACATAGA TCCGT CCTATGTTCGAACATAGCA AGATCTATGTTCGAA TERM 2909 2206943 - 2206980 + F 100 -18.8 -5.45726 | opp_overlap 2206918 2206917 2206931 2206964 2206965, overlap 2206916 2206933 AAACATAGATCCGTC CTATGTTCGAACATAG CAAGAT CTATGTTCGAACATAG TTTTTTTAACATATA SeD_A2326 2207105 - 2207839 + | putative DNA-binding protein TERM 2910 2208222 - 2208208 - g 72 -3.6 -4.74013 | CCGAAACATACAAAA CAATAA TCC TTATCG TGGGTGGTCTGAAGG SeD_A2327 2207867 - 2208658 + | hypothetical protein SeD_A2328 2209041 - 2209223 + | hypothetical protein SeD_A2329 2209384 - 2209788 + | H-NS histone family protein TERM 2911 2209795 - 2209824 + F 73 -10.2 -2.96366 | opp_overlap 2209795 2209800, overlap 2209794 2209800 GCACTCTGATCACAA TAAAACCGTCAA TCTAAT TTGGCGGTTTTA CTTTCGTTCGCTGTA TERM 2912 2209819 - 2209800 - f 71 -3.5 -4.81212 | opp_overlap 2209795 2209794 2209800, overlap 2209795 CTGATCACAATAAAA CCGTCAA TCTAAT TTGGCGG TTTTACTTTCGTTCG TERM 2913 2209800 - 2209819 + F 74 -5.7 -4.62054 | opp_overlap 2209800 2209795, overlap 2209795 2209794 CTGATCACAATAAAA CCGTCAA TCTAAT TTGGCGG TTTTACTTTCGTTCG SeD_A2330 2209891 - 2210022 + | hypothetical protein TERM 2914 2210157 - 2210119 - T 77 -9 -3.86372 | opp_overlap 2210114 2210119, overlap 2210143 TTAAGCTAAATAGAA TCTGACAGATATCTGT ATAAATA ACTGATAACTGTCAGA TCTGATTTGAGCCAA TERM 2915 2210806 - 2210772 - T 100 -16.8 -2.83715 | CTCACCATTATCATA TGTTAGGTTAATGTTA GTT TAACACTAACCTAACA TAAAGTGGGACTAAT SeD_A2331 2212088 - 2210817 - | hypothetical protein TERM 2916 2212186 - 2212175 - R 75 -3 -5.14563 | TTTTCTATTAAAAAA TGAT CTCA ATCA AATTTATAGTTATAA SeD_A2333 2212965 - 2212675 - | hypothetical protein SeD_A2334 2213265 - 2213047 - | hypothetical protein TERM 2917 2213395 - 2213437 + r 89 -4.2 -5.73978 | ATGTTTATATAATAT GAATACAGGGGAAGTTCA GGGTTAG TGGATGTCCCTTGTTTTC TTTTTTGTTTCTGGT SeD_A2335 2214291 - 2213416 - | hypothetical protein TERM 2918 2213529 - 2213519 - G 90 -5.4 -5.14563 | TTTTTTATGAAAAAA TCAC TCA GTGA CTTGAAATAATTGTC TERM 2919 2214580 - 2214564 - H 70 -9.5 -3.06162 | overlap 2214566 GACTTTATGGTAATA CAGCATT AAA AATGCTG GTAAATATGATGGTA TERM 2920 2214734 - 2214761 + H 83 -6.2 -5.05782 | AAGAAATTATCTTTA CCCGGTTGATCT GATA AGGTTTGCCGGG TTTTTTGACATCCAT TERM 2921 2215005 - 2214994 - g 83 -7.2 -4.58585 | overlap 2214995 CACCGAAAGAAGAAA CGCC GCCC GGCG CGCCGGAGAAATACG SeD_A2336 2214834 - 2215358 + | putative endoprotease SeD_A2337 2215532 - 2215407 - | hypothetical protein TERM 2922 2215545 - 2215500 - G 76 -12 -3.05384 | gap 1, opp_overlap 2215486, overlap 2215526 GCGCCCGGCACTCAA CCGGTGCGTCACTTTCGTCGC GCAAA GCGAC-AAAGTGACGCACAAC CACTACACCGCGCCA TERM 2923 2217624 - 2217611 - g 74 -2.3 -5.00027 | ATGAAAAAGACAAAA TAGCG GAAA CGCTG ACGTTTAAAGATGGT TERM 2924 2218317 - 2218299 - g 74 -2.3 -5.00846 | TAAAGACGATAAAAA GCAGGGA GCCGA TCGCCGC TGGAGCGAACGTACC SeD_A2339 2216872 - 2219040 + | tetratricopeptide repeat protein SeD_A2340 2219097 - 2220827 + | putative periplasmic protein TERM 2925 2220883 - 2220832 - f 80 -13.1 -2.52896 | gap 2 CCACGCCTTAATCGA TTTACCCGCCCGGCCACCTTTCTCA CATG CGGG-AAGGCGGC-GGGCGGGAAAA ATCAATCGCGGAAGT SeD_A2341 2220858 - 2220992 + | hypothetical protein SeD_A2342 2221037 - 2221210 + | hypothetical protein SeD_A2343 2221302 - 2221451 + | hypothetical protein TERM 2926 2221659 - 2221616 - T 100 -16.8 -3.29043 | opp_overlap 2221610 2221620, overlap 2221619 2221620 AAGCTCGCGGCACAA TAAGGCCTTAGCGGGATGCA GAAT CGCCTCCCGCTAAGGCTTCA TTCAGCCGCTTTCCA TERM 2927 2221656 - 2221619 - T 100 -16.3 -3.78934 | opp_overlap 2221610 2221620, overlap 2221616 2221620 CTCGCGGCACAATAA GGCCTTAGCGGGATGCA GAAT CGCCTCCCGCTAAGGCT TCATTCAGCCGCTTT TERM 2928 2221655 - 2221620 - T 100 -19.8 -2.87146 | opp_overlap 2221610 2221620, overlap 2221619 2221616 TCGCGGCACAATAAG GCCTTAGCGGGATGCA GAAT CGCCTCCCGCTAAGGC TTCATTCAGCCGCTT TERM 2929 2221620 - 2221655 + T 100 -19.1 -3.34192 | opp_overlap 2221620 2221619 2221616, overlap 2221610 TCGCGGCACAATAAG GCCTTAGCGGGATGC AGAATC GCCTCCCGCTAAGGC TTCATTCAGCCGCTT amn 2223186 - 2221732 - | AMP nucleosidase TERM 2930 2221940 - 2221917 - G 83 -8 -4.40003 | overlap 2221918 2221920 TGTCAGAAACACAAA GCAGCGTGCC GTAA GGCACGCGGA AGCGATAGCCCTGGG TERM 2931 2221939 - 2221918 - G 74 -11.5 -3.23279 | overlap 2221917 2221920 GTCAGAAACACAAAG CAGCGTGCC GTAA GGCACGCGG AAGCGATAGCCCTGG TERM 2932 2221937 - 2221920 - G 83 -12.7 -3.16835 | overlap 2221918 2221917 CAGAAACACAAAGCA GCGTGCC GTAA GGCACGC GGAAGCGATAGCCCT SeD_A2345 2223271 - 2223393 + | putative cytoplasmic protein SeD_A2346 2223708 - 2223382 - | putative cytoplasmic protein TERM 2933 2224521 - 2224494 - R 100 -12 -5.05782 | ATGGATGTCAAAAAA CCCGGTAAACCT TCTC AGGTCAACCGGG TAAAGATAATTTATT TERM 2934 2224876 - 2224866 - R 72 -8.2 -3.73756 | overlap 2224864 2224867 GACGCCAGTAAAACA GCGC GCC GCGC ACGGCCCAGTCAAGA TERM 2935 2226557 - 2226584 + r 100 -9.8 -5.00884 | AAGAACTTATCTTTA CCCGGTTGACCT GATA AGGTTTGCCGGG TTTTTTGACGCCCAT SeD_A2350 2227648 - 2226719 - | protein ErfK/srfK cobT 2228796 - 2227726 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobS 2229566 - 2228823 - | cobalamin 5'-phosphate synthase TERM 2936 2229148 - 2229107 - G 100 -10.7 -4.75472 | gap 1 GGTACATCAATAAAA CGGCGCTG-CCGCGTCCGGC CGC ACAGGCCGCCGCCAACGCCG CCAACATTGGCGTTC TERM 2937 2229309 - 2229296 - G 74 -2.4 -5.00616 | GGCGCGCGGAAAAAA TACC ATCGCA GGTA TCGGCCAACCCATCC SeD_A2353 2230108 - 2229563 - | bifunctional adenosylcobalamin biosynthesis protein CobU cobQ 2231625 - 2230105 - | cobyric acid synthase CobQ TERM 2938 2231141 - 2231103 - G 76 -9.7 -3.86346 | gap 2, overlap 2231105 CCAGCGTGCCATAAA TAGCGGCGAATA-CG-CCG CCT CGGTCGATATCCGCCACCA GAATAACCGGACACT TERM 2939 2231120 - 2231105 - G 81 -11.8 -3.52113 | overlap 2231103 AGCGTGCCATAAATA GCGGCG AATA CGCCGC CTCGGTCGATATCCG TERM 2940 2231569 - 2231550 - G 79 -2.7 -5.252 | overlap 2231551 2231561 2231562 CATCCTGATAAAAAA TGCGGCA TAAACC CGCCGCC AGCACACTTTTGCCG SeD_A2355 2232437 - 2231622 - | cobalt import ATP-binding protein CbiO cbiQ 2233123 - 2232446 - | cobalt ABC transporter, permease protein CbiQ TERM 2941 2232600 - 2232588 - G 71 -4.8 -4.56133 | overlap 2232583 CTGCAATAACCAAAA CGCA GCGTT TGCG AGCGACGAATTGCCG TERM 2942 2233078 - 2233061 - G 76 -5.5 -4.81551 | opp_overlap 2233064 2233064, overlap 2233062 CAGCCACAGCAAAAA CTTGCGC TGCG GCGCAAC GTGTGCCCAGCGGCT SeD_A2357 2233391 - 2233110 - | cobalt transport protein CbiN cbiM 2234130 - 2233393 - | cobalamin biosynthesis protein CbiM TERM 2943 2233633 - 2233620 - G 75 -3.7 -4.96848 | overlap 2233622 TCGCGCACAGAAAAA CGGCG ACAT CGCGG CGCAGTCCGGCACGG TERM 2944 2233906 - 2233891 - G 74 -2.4 -4.98911 | overlap 2233892 CAGGACAAAAATAAA CGCGCC GCAC AGCGCC AGCAGTACCTTCTGA cobI 2234840 - 2234127 - | precorrin-2 C20-methyltransferase TERM 2945 2234404 - 2234425 + g 77 -8 -4.07568 | opp_overlap 2234393 ATAACCGCCAGCGAT TGCCGTTC TATGGC GAGCGGCA TTTTCGCGCGGGCGG TERM 2946 2234528 - 2234516 - G 91 -4.1 -5.52384 | TCTGGAGTAAAAAAA TCCAG GTA CTGAA TAGCATCGCATCGCC TERM 2947 2234782 - 2234768 - G 79 -11.4 -3.68569 | opp_overlap 2234766 CCAGCGAGCCAAGAA TCCGCG CTG CGCGGA CGGTTATCAGGTCGG SeD_A2360 2235631 - 2234837 - | sirohydrochlorin cobaltochelatase TERM 2948 2234896 - 2234909 + g 86 -9.5 -4.36914 | opp_overlap 2234881 2234894 GCGCGACAAACATCG CCCGG ATAG CCGGG TTTTCTCCCAGCCCG cobK 2236425 - 2235634 - | precorrin-6x reductase cobJ 2237147 - 2236422 - | precorrin-3B C17-methyltransferase TERM 2949 2236653 - 2236668 + g 78 -11.8 -3.28924 | opp_overlap 2236629 CAGATGCCCTTCGCG CCCGCG GCTG CGCGGG TTGTAAAAACAGATA SeD_A2363 2238202 - 2237147 - | CbiG TERM 2950 2237354 - 2237380 + g 76 -2.9 -5.03314 | CACGCGGCAGCAGGA GGCGAGCTG AATAAGCCC CGGCTCCCC TTTTTTGAGCGTGAC cobM 2238956 - 2238183 - | precorrin-4 C11-methyltransferase SeD_A2365 2239518 - 2238940 - | precorrin-8W decarboxylase cbiE 2240113 - 2239508 - | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit TERM 2951 2239895 - 2239883 - G 75 -6.9 -4.40358 | ACCGATGCCATAAAA CAGCG GAT CGCCG GAGGCCAGCACCACG cbiD 2241246 - 2240107 - | cobalamin biosynthesis protein CbiD TERM 2952 2240187 - 2240204 + g 71 -6.2 -4.25104 | opp_overlap 2240198 AAGAAAACAGGATGG CGTCGC AGACAG GCGGCG TTTTGGTAAAACGCA SeD_A2368 2241878 - 2241246 - | cobalt-precorrin-8X methylmutase cobD 2242848 - 2241889 - | cobalamin biosynthesis protein CobD cobB 2244224 - 2242845 - | cobyrinic Acid a,c-diamide synthase TERM 2953 2243139 - 2243111 - G 71 -11.1 -2.87146 | opp_overlap 2243116 2243117, overlap 2243110 2243115 2243116 GCGCCTCACAATAAC CAAAGCGGGTAAG TCG CTTACCCATTTTG CTGTGACCGGGGATA TERM 2954 2243116 - 2243134 + g 77 -7.4 -4.34402 | opp_overlap 2243115 2243111 2243110 2243116, overlap 2243117 TCACAATAACCAAAG CGGGTAAG TCG CTTACCCA TTTTGCTGTGACCGG TERM 2955 2243117 - 2243133 + g 71 -10.9 -3.2032 | opp_overlap 2243116 2243115 2243111 2243110, overlap 2243116 CACAATAACCAAAGC GGGTAAG TCG CTTACCC ATTTTGCTGTGACCG TERM 2956 2244116 - 2244128 + g 95 -10.5 -4.56775 | opp_overlap 2244108 CTTTAAACGGCTGTA CGCGC AGC GCGCG TTTTTGCAGCAGCCT SeD_A2372 2245733 - 2244822 - | regulatory protein PocR TERM 2957 2245124 - 2245145 + g 89 -2.9 -5.48054 | opp_overlap 2245124 2245135 GATCGTCGGACAAAT GCGCATC AATATAGC GAAGCGC TTTTTTCATTTTACT TERM 2958 2245837 - 2245869 + r 80 -13 -2.56596 | gap 1, opp_overlap 2245837 2245843, overlap 2245842 2245843 AGTACAATGACAATA TCAAAA-GTCTCCCA TTGC TGGGAGACGTTTTGA TCAGTTCGTGAAAGC TERM 2959 2245869 - 2245837 - R 86 -13 -3.36046 | gap 1, opp_overlap 2245837 2245842 2245843, overlap 2245843 AGTACAATGACAATA TCAAAA-GTCTCCCA TTGC TGGGAGACGTTTTGA TCAGTTCGTGAAAGC TERM 2960 2245842 - 2245863 + r 79 -8.7 -4.31379 | opp_overlap 2245837 2245843, overlap 2245837 2245843 AATGACAATATCAAA AGTCTCCCA TTGC TGGGAGACG TTTTGATCAGTTCGT TERM 2961 2245862 - 2245843 - R 100 -12.2 -4.47259 | opp_overlap 2245842 2245837 2245843, overlap 2245837 ATGACAATATCAAAA GTCTCCCA TTGC TGGGAGAC GTTTTGATCAGTTCG TERM 2962 2245843 - 2245862 + r 81 -12.2 -3.18105 | opp_overlap 2245843 2245837, overlap 2245842 2245837 ATGACAATATCAAAA GTCTCCCA TTGC TGGGAGAC GTTTTGATCAGTTCG SeD_A2373 2246744 - 2245950 - | propanediol diffusion facilitator pduA 2247269 - 2247553 + | propanediol utilization protein PduA SeD_A2375 2247550 - 2248362 + | propanediol utilization protein PduB TERM 2963 2248529 - 2248508 - g 72 -2.3 -4.84017 | gap 1, overlap 2248510 AACCGTCGATAAAAA TCG-TTAACG GCG CGGTAACCGA GCTGGACGGAAAACC pduC 2248381 - 2250045 + | propanediol utilization dehydratase, large subunit TERM 2964 2250719 - 2250703 - g 83 -7.9 -4.59773 | opp_overlap 2250715, overlap 2250705 2250714 CGTGACGGGCAAAAA CCCGCAG GAA CTGCGCG TGGCGCTTTGATAAA SeD_A2377 2250056 - 2250730 + | propanediol utilization: dehydratase, medium subunit TERM 2965 2250715 - 2250725 + F 72 -8.2 -3.73224 | opp_overlap 2250705 2250703 2250714 AAACCCGCAGGAACT GCGC GTG GCGC TTTGATAAAGGATAA TERM 2966 2250857 - 2250800 - g 72 -11.2 -3.14051 | gap 3, overlap 2250798 TGAGCCGCATGAACA GC-CTGCAGGGCGATGC-GCCAGCAGCGG CTC CTGCGGCAGGCGGCA-CGTCCCGCAGCGC AAAGGTCAGCGACTA TERM 2967 2250903 - 2250889 - g 70 -7.1 -4.15044 | CCGCTGGCGAACAAA CACCC GGAAT GGGTG AAAACCGCCACCAAT SeD_A2378 2250745 - 2251266 + | propanediol dehydratase small subunit TERM 2968 2251977 - 2251965 - g 86 -7.7 -4.82667 | CGATGAGACGAAAAA CATCG TCC CGATG GCGCGCGCGCTGATT TERM 2969 2252032 - 2252021 - g 74 -7.2 -4.07568 | CCGTGGTGGTTAAAA CGCC ATCC GGCG ACGTCAAAGCGCGCG TERM 2970 2252608 - 2252564 - g 83 -12.3 -3.71917 | gap 1, opp_overlap 2252564, overlap 2252557 ACCCTAAAGGCGAAA TCATCGCCACTCACCTCGCC GGTGCA GGCGACATG-GTGACGATGA TTATTGCCCGCGAGC SeD_A2379 2251276 - 2253108 + | glycerol dehydratase reactivation factor large subunit SeD_A2380 2253098 - 2253448 + | propanediol dehydratase reactivation protein SeD_A2381 2253467 - 2253742 + | propanediol utilization protein PduJ TERM 2971 2253951 - 2253906 - g 90 -10.4 -4.26076 | gap 1, overlap 2253907 2253909 GGATGGTGATTAAAA TTACCGGTGATG-TGGCCTCC GTGCA GGCGGCCATCACCACCGGTGC GCAATTTGCCGAACA TERM 2972 2253950 - 2253907 - g 84 -13.9 -3.15324 | gap 1, overlap 2253906 2253909 GATGGTGATTAAAAT TACCGGTGATG-TGGCCTCC GTGCA GGCGGCCATCACCACCGGTG CGCAATTTGCCGAAC TERM 2973 2253948 - 2253909 - g 100 -16.5 -3.13504 | gap 1, overlap 2253907 2253906 TGGTGATTAAAATTA CCGGTGATG-TGGCCTCC GTGCA GGCGGCCATCACCACCGG TGCGCAATTTGCCGA SeD_A2382 2253767 - 2254228 + | propanediol utilization protein SeD_A2383 2254228 - 2254860 + | propanediol utilization SeD_A2384 2254857 - 2255348 + | propanediol utilization SeD_A2385 2255352 - 2255627 + | propanediol utilization protein SeD_A2386 2255637 - 2256647 + | PduO TERM 2974 2256724 - 2256699 - g 73 -10.3 -3.40867 | overlap 2256702 2256715 TTAGCGAGCAATTAA CCACGCCGGCG CAAA CGCCGGCCCAG CCTCAGGGCAAAGGG SeD_A2387 2256644 - 2258038 + | ethanolamine utilization protein EutE TERM 2975 2258902 - 2258921 + G 71 -4.8 -4.56597 | overlap 2258900 2258904 GCCAAACGCTACGCG CGGCTGGC CAAA GCCTGCGG TTTTTGCCCGGCAGA SeD_A2388 2258050 - 2259162 + | propanediol utilization: propanol dehydrogenase TERM 2976 2259218 - 2259234 + G 74 -11.5 -3.28712 | overlap 2259221 2259221 TGAAATTCGCGAGCG CGTCCGC GCA GCGGGCG TTGTCGGCGCGGGCG SeD_A2389 2259159 - 2260514 + | polyhedral body protein TERM 2977 2260627 - 2260639 + G 70 -3.3 -4.7871 | GGTCAGCAAGACCAT CTGCC CGG GGAAG TTTTTACTGATGCTT SeD_A2390 2260517 - 2261071 + | polyhedral body protein SeD_A2391 2261098 - 2261421 + | propanediol utilization protein PduU TERM 2978 2261493 - 2261469 - g 73 -5.5 -4.58395 | opp_overlap 2261488 2261490 GCCAGTGCGGAAAAA CCTCGCTGACC CAA AGCCTGCGCGG CGAAGCGCTCCATTA eutP 2261426 - 2261878 + | ethanolamine utilization protein, EutP TERM 2979 2262137 - 2262150 + G 74 -2.3 -5.02074 | overlap 2262126 2262127 TGGGCCATCGTGTGG CGCAC GGCG GTGAG TTTTTTAAAGACTCG TERM 2980 2262458 - 2262442 - g 78 -6.5 -4.56597 | GTTCTGGCGGAAAAA CTGGGTG TAC CACTCAG CGCATTACGGGTGAT ackA 2261863 - 2263077 + | acetate kinase SeD_A2394 2263171 - 2264037 + | propanediol utilization TERM 2981 2264063 - 2264029 - T 79 -10.7 -3.53563 | ACAGGCGGGGTCAAA CTGCAGTGAGAGCCT GATAT ACGCTCCCACTGCCG TAGCGCATTATTCGG SeD_A2395 2264406 - 2264071 - | protein YeeX SeD_A2396 2265709 - 2264651 - | inner membrane protein YeeA TERM 2982 2265339 - 2265361 + g 76 -2.8 -5.08824 | gap 1, opp_overlap 2265326, overlap 2265339 ACGGCAAGCGTTATG CC-TATCAG TAGCGC CTGATACGG TTTTTTCCCTAAGGC TERM 2983 2265776 - 2265804 + r 76 -8.2 -4.07568 | gap 1, overlap 2265777 CAAAAATAGCGCACT G-GCGGACGGA ACACATTA TCCGTCCGCTC TTTTCAGCCAGGAAA TERM 2984 2265777 - 2265802 + r 86 -11.9 -3.63744 | overlap 2265776 AAAAATAGCGCACTG GCGGACGGA ACACATTA TCCGTCCGC TCTTTTCAGCCAGGA SeD_A2397 2266295 - 2265828 - | DNA gyrase inhibitory protein TERM 2985 2265971 - 2265960 - G 90 -5.8 -5.23316 | GAGGACATCAAAAAA CCGT TCCC ACGG CTTCGCAAAGTCACG SeD_A2398 2267618 - 2266446 - | D-alanyl-D-alanine carboxypeptidase DacD TERM 2986 2267555 - 2267536 - G 86 -10 -4.25104 | GGTTGGGGAGCAAAA CTTACGGC ATCG GCCGCAAG CGCAGGAGAAAGGTG TERM 2987 2267721 - 2267684 - R 74 -8.5 -4.0056 | opp_overlap 2267690 2267695, overlap 2267685 2267695 ACAAACATGGATAAA TTGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCTG ACATTATTTTATGGA TERM 2988 2267720 - 2267685 - R 78 -12 -2.99251 | opp_overlap 2267690 2267695, overlap 2267684 2267695 CAAACATGGATAAAT TGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCT GACATTATTTTATGG SeD_A2399 2268506 - 2267742 - | thiosulfate reductase cytochrome B subunit SeD_A2400 2269081 - 2268503 - | 4Fe-4S binding domain protein phsA 2271372 - 2269096 - | thiosulfate reductase TERM 2989 2271315 - 2271305 - G 77 -8.2 -4.07568 | GCCCCGGGCGGAAAA GCGC CCA GCGC GCAGGCAGAGCAGCC TERM 2990 2272202 - 2272187 - g 81 -2.6 -5.31275 | overlap 2272195 CGTTACCACAAAAAA TAAAAG ACTT CTTTCA GCCGAAAGATAAAAA TERM 2991 2272324 - 2272310 - g 83 -7.2 -4.59511 | AAGATGTCTCAAAAA TGAATG CAG CATTCA TGCGTAAGCATATTG SeD_A2402 2271991 - 2274339 + | secreted effector protein TERM 2992 2274366 - 2274385 + T 79 -12.2 -2.91264 | opp_overlap 2274366 CCCGCATGGAGTTAA GGGACACA GCGT TGTGTCCC TCTGTAAATAGACCC TERM 2993 2274385 - 2274366 - T 80 -12.2 -3.07816 | opp_overlap 2274366 CCCGCATGGAGTTAA GGGACACA GCGT TGTGTCCC TCTGTAAATAGACCC SeD_A2403 2274689 - 2274543 - | hypothetical protein TERM 2994 2275996 - 2276022 + G 87 -8.6 -4.57837 | opp_overlap 2275998, overlap 2275998 CAGCGCTGGCTAGAG CATCGCCGTCAG GTG CTGACGCCGGAG TTTTTACAACAATAT SeD_A2404 2274706 - 2276136 + | exodeoxyribonuclease I TERM 2995 2276244 - 2276226 - T 100 -16 -5.73978 | opp_overlap 2276226 ATGACAAACAAAAAA CCGGAGGC ACT GCCTCCGG TTTTACTATTGCCGA TERM 2996 2276226 - 2276244 + T 100 -16 -4.4261 | opp_overlap 2276226 ATGACAAACAAAAAA CCGGAGGC ACT GCCTCCGG TTTTACTATTGCCGA yeeF 2277630 - 2276272 - | amino acid permease TERM 2997 2277814 - 2277787 - R 100 -9.2 -5.63103 | opp_overlap 2277790 TTTGAAGCAAAAAAA TAACCGACGCGT ATTA AAACGTCGGTTA GTGTCATTTTTTGCA SeD_A2406 2278830 - 2277916 - | LysR substrate binding domain protein TERM 2998 2278771 - 2278782 + g 77 -4.4 -4.83615 | overlap 2278766 TGCCGACGCCGCCGC GAAG CTGC CTTC TTTTTCTAACGCATC SeD_A2407 2279700 - 2278876 - | protein YeeZ TERM 2999 2279589 - 2279606 + g 81 -8.4 -4.26076 | TCATACGGGCCGCTT CCACCC CGTCAA GGGTGG TTTTGCTGCCGGTAA TERM 3000 2279978 - 2280004 + H 100 -22.4 -5.75342 | opp_overlap 2279978 TGAACGCATGAGAAA GCCCCCGGAAGA TCA TCTTCCGGGGGC TTTTTTTTGGCGCGC TERM 3001 2280004 - 2279978 - H 100 -22.4 -3.99405 | opp_overlap 2279978 TGAACGCATGAGAAA GCCCCCGGAAGA TCA TCTTCCGGGGGC TTTTTTTTGGCGCGC TERM 3002 2280915 - 2280905 - g 71 -8.2 -3.89617 | opp_overlap 2280907 ATGGAGAAACTGAAA GCGC TTG GCGC CAGCTCGATTCTGGT hisG 2280059 - 2280958 + | ATP phosphoribosyltransferase TERM 3003 2281217 - 2281194 - g 76 -5.2 -4.78149 | gap 1, opp_overlap 2281213 TGGATAATGTAAAAA CACGCGGTGAC GAT GCC-CTGCGTG AATACAGCGCTAAAT TERM 3004 2281271 - 2281242 - g 93 -11.5 -4.44974 | gap 1 CTAAATTTGATAAAA CAGAAGTGACAGCG CTA CGC-GTCACCCCTG AAGAGATCGCCGCCG hisD 2281061 - 2282365 + | histidinol dehydrogenase hisC 2282362 - 2283441 + | histidinol-phosphate aminotransferase TERM 3005 2284230 - 2284254 + G 76 -10.7 -3.62096 | opp_overlap 2284230, overlap 2284232 CTGCCGATGGATGAA TGTCTGGCGCG CTG CGCGCTGGATA TTTCCGGTCGTCCGC TERM 3006 2284232 - 2284252 + G 75 -11.1 -3.39018 | opp_overlap 2284230, overlap 2284230 GCCGATGGATGAATG TCTGGCGCG CTG CGCGCTGGA TATTTCCGGTCGTCC TERM 3007 2284416 - 2284400 - g 70 -3 -4.82855 | gap 1 GACTAAAGGTAAAAA CGATCAC CACC GTG-TCG AAAGTTTGTTTAAAG hisB 2283438 - 2284505 + | histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisH 2284505 - 2285095 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 3008 2285556 - 2285538 - g 84 -8.8 -4.25104 | CGGCTGGCAGGAAAA TTCCGGCG TCT CGCTGGAA CAACTGGTGGAGACC hisA 2285095 - 2285832 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase hisF 2285814 - 2286590 + | imidazoleglycerol phosphate synthase, cyclase subunit TERM 3009 2286651 - 2286627 - g 84 -6.3 -5.03314 | overlap 2286628 TGGACTGGGAAAAAA CCGATGGCCTG ATG CCAGCCATCGT GCAACATGCGGTATC TERM 3010 2286650 - 2286628 - g 71 -9.8 -3.61506 | overlap 2286627 GGACTGGGAAAAAAC CGATGGCCTG ATG CCAGCCATCG TGCAACATGCGGTAT SeD_A2416 2286584 - 2287195 + | histidine biosynthesis bifunctional protein hisIE TERM 3011 2287231 - 2287197 - T 87 -14.4 -2.83073 | opp_overlap 2287207, overlap 2287207 AGCGTCATCAATAAG CGTAAAAAAACCGGGC AAT GCCCGGTTTTTTAATG AGAAATTTTACCTGT TERM 3012 2287221 - 2287207 - T 100 -12.8 -5.48303 | opp_overlap 2287207, overlap 2287197 ATAAGCGTAAAAAAA CCGGGC AAT GCCCGG TTTTTTAATGAGAAA TERM 3013 2287207 - 2287221 + T 100 -12.8 -5.14563 | opp_overlap 2287207 2287197 ATAAGCGTAAAAAAA CCGGGC AAT GCCCGG TTTTTTAATGAGAAA SeD_A2417 2288259 - 2287276 - | chain length determinant protein TERM 3014 2287660 - 2287680 + g 74 -4.7 -4.77036 | GCGCAACGCTTCTTC GATTTGCTT AAT ACGCAGATC TTTTTGCTCCTGCGC TERM 3015 2288393 - 2288374 - R 70 -10 -3.10244 | opp_overlap 2288374, overlap 2288371 TTGGTCAATAAATCA TCGGGACT CATC AGCCCCGA TTGCCTTATTAATCA SeD_A2418 2289568 - 2288402 - | udp-glucose 6-dehydrogenase SeD_A2419 2289818 - 2289630 - | hypothetical protein TERM 3016 2289786 - 2289768 - G 100 -11.7 -6.32216 | opp_overlap 2289763 AGAGATAAAAAAAAA GCCCGGT ATTAA ACCGGGC TTAAACATTTTTGCA gnd 2291212 - 2289806 - | 6-phosphogluconate dehydrogenase, decarboxylating SeD_A2421 2292806 - 2291376 - | undecaprenyl-phosphate galactose phosphotransferase TERM 3017 2291658 - 2291648 - G 76 -5.4 -4.82667 | TTAGTACATTAAAAA GTTG TGG CAAC TCATCAAGGCTAGTT SeD_A2422 2294310 - 2292877 - | putative phosphomannomutase SeD_A2423 2295736 - 2294297 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase SeD_A2424 2296681 - 2295737 - | putative O antigen biosynthesis rhamnosyltransferase SeD_A2425 2297743 - 2296682 - | protein RfbU TERM 3018 2297447 - 2297467 + g 85 -2.5 -5.4505 | overlap 2297448 CAGTAAGGGGATAGT GTGATGTGT AGT ACACACCAA TTTTTTATTACCAAA TERM 3019 2297986 - 2297975 - R 76 -2.2 -5.28826 | AAATGCCACAAAAAA TAGC ATCT GCCA TAATATACTCACTCT TERM 3020 2298061 - 2298046 - R 73 -4 -4.78981 | AGTAAGCAAAAGAAA GAAAAC TAGG GTTTCC GACAATCTCTAATTG SeD_A2426 2299319 - 2298318 - | O antigen biosynthesis abequosyltransferase RfbV SeD_A2427 2300604 - 2299321 - | putative O-antigen transporter TERM 3021 2299923 - 2299911 - G 81 -4.1 -5.22794 | ATAAGGACGAAAAAA TCAGA AAC CCTGA TGAACGTGATAGTAA TERM 3022 2300683 - 2300666 - R 78 -12.7 -2.71731 | opp_overlap 2300660 TTCATTCTTTAATTA TGCCCGC TTTC GCGGGCA GAAACATCATATAGA SeD_A2428 2301706 - 2300690 - | CDP-paratose 2-epimerase SeD_A2429 2302542 - 2301703 - | paratose synthase SeD_A2430 2303891 - 2302578 - | lipopolysaccharide biosynthesis protein RfbH TERM 3023 2303398 - 2303411 + g 78 -6.7 -4.62475 | TTACCGAGTGTATGA GCGAT CATT ATCGC TTTTGATTTCTCAGT rfbG 2304997 - 2303918 - | CDP-glucose 4,6-dehydratase rfbF 2305775 - 2305002 - | glucose-1-phosphate cytidylyltransferase TERM 3024 2305951 - 2305927 - R 75 -6.5 -4.53034 | overlap 2305930 TCTAGAGAATCAAAA TCATCCATCAC AGC ATGATGGACAA ATCCCTTTCTTCCCC rfbC 2307319 - 2306771 - | dTDP-4-dehydrorhamnose 3,5-epimerase rfbA 2308207 - 2307323 - | glucose-1-phosphate thymidylyltransferase TERM 3025 2308238 - 2308225 - R 81 -8.1 -4.55287 | opp_overlap 2308225 CTCATTCATAGAAAA TGCCC TGAT GGGCA TTTAAATTTATCAGA TERM 3026 2308225 - 2308238 + r 74 -8.1 -3.89215 | opp_overlap 2308225 CTCATTCATAGAAAA TGCCC TGAT GGGCA TTTAAATTTATCAGA rfbD 2309148 - 2308249 - | dTDP-4-dehydrorhamnose reductase rfbB 2310233 - 2309148 - | dTDP-glucose 4,6-dehydratase TERM 3027 2309553 - 2309577 + g 71 -8.6 -3.91911 | overlap 2309554 ATCGCGAATCTGATC CCCTTTGCCA TAAAT TGGCAAAGGC TTTCCTTCCAGTGCG TERM 3028 2309554 - 2309576 + g 75 -12.1 -2.94825 | overlap 2309553 TCGCGAATCTGATCC CCTTTGCCA TAAAT TGGCAAAGG CTTTCCTTCCAGTGC TERM 3029 2309778 - 2309790 + g 80 -9.1 -4.20696 | opp_overlap 2309776 TTCAGTAAATAACGG CAGCG TAA CGCTG TTTTCAACTTCATCA TERM 3030 2310388 - 2310369 - R 71 -7.8 -3.86897 | TCGACTTGTTACAAA CCTCGCCC AGCA GGGCAAAG CTCACTAAAACTTAA TERM 3031 2310567 - 2310516 - R 100 -10.1 -4.75518 | opp_overlap 2310516 TATACAAAACTAAAA CGGCAGTCAACACTCGCTTCAGC CAACTT GCCGCTTCGAATGTTCACTGCCG TTATTATGTTTATCA galF 2311503 - 2310610 - | regulatory protein GalF SeD_A2439 2313078 - 2311681 - | colanic acid biosynthesis protein WcaM SeD_A2440 2314315 - 2313095 - | putative colanic acid biosynthesis glycosyltransferase WcaL SeD_A2441 2315592 - 2314312 - | colanic acid biosynthesis protein WcaK SeD_A2442 2317146 - 2315614 - | lipopolysaccharide biosynthesis protein WzxC SeD_A2443 2318588 - 2317194 - | undecaprenyl-phosphate glucose phosphotransferase TERM 3032 2317254 - 2317241 - G 72 -2.4 -4.86033 | overlap 2317229 AAATCGTCAGAAAAA CGAT TTTGAT ATCG AACCAAATACTCCAT cpsG 2320012 - 2318642 - | phosphomannomutase cpsB 2321559 - 2320123 - | mannose-1-phosphate guanylyltransferase TERM 3033 2321319 - 2321347 + g 76 -11.7 -3.01924 | opp_overlap 2321317 GCTCAAGAATAATGT TCTCCGTCAGCTT ATT GAGCTGGCGGAGC TGTTCGGCAACGATA TERM 3034 2321393 - 2321366 - G 73 -5.5 -4.5442 | opp_overlap 2321352 TCGGCAACGATAAAA CGGTGCTGTTC GTTACA GATCACCACCG GGCTTTCGCACTCCA wcaI 2322785 - 2321562 - | colanic acid biosynthesis glycosyl transferase WcaI nudD 2323255 - 2322782 - | GDP-mannose mannosyl hydrolase fcl 2324223 - 2323258 - | GDP-L-fucose synthetase TERM 3035 2323679 - 2323664 - G 72 -11.8 -2.83403 | overlap 2323663 GCGGCCTCATGAAAG CGGCGC AGCA GCGCCG GGATCACATGTGAAT TERM 3036 2323922 - 2323955 + g 74 -11.1 -3.24235 | overlap 2323920 CCGAGAAACAGCAGT TTGTTCACGTTGTGC AGGT GCGCGGCGTGAATAA TGTTGCTCTCTATCA gmd 2325347 - 2324226 - | GDP-mannose 4,6-dehydratase TERM 3037 2324306 - 2324338 + g 70 -9.1 -3.71649 | overlap 2324307 2324309 2324315 CCTCCAGATCGTTCG CCACCATCTCGGAGA CCA TCTCCGACAGGGTGA TTTCCGGTTTCCAGC TERM 3038 2324307 - 2324337 + g 76 -12.6 -2.82668 | overlap 2324306 2324309 2324315 CTCCAGATCGTTCGC CACCATCTCGGAGA CCA TCTCCGACAGGGTG ATTTCCGGTTTCCAG SeD_A2450 2325925 - 2325371 - | transferase hexapeptide repeat containing protein SeD_A2451 2326687 - 2325941 - | putative colanic acid biosynthesis glycosyl transferase WcaE SeD_A2452 2327914 - 2326700 - | putative colanic acid polymerase TERM 3039 2326797 - 2326787 - GR 76 -3.2 -5.055 | TGAACCGGTAAAAAA CAGT GAC ACCG GCGTAAAAAGATAGA TERM 3040 2327411 - 2327398 - GR 71 -4.5 -4.64861 | CCGGTTCAAAATAAA GCGCA GTGG TACGC TTACCGCCAAATTTT SeD_A2453 2329106 - 2327889 - | putative colanic acid biosynthesis glycosyl transferase WcaC TERM 3041 2327984 - 2327967 - GR 71 -7.7 -3.84825 | gap 1 GCTACGCATACGAAA GGCGTCCA GCG TGG-CGCC AAATACCGCCTGAGC TERM 3042 2328539 - 2328528 - GR 73 -5.8 -4.41348 | overlap 2328530 GCTCGGCGAAATAAA CTGG CAGC CCAG CCGCAGCATGTCCCG SeD_A2454 2329591 - 2329103 - | putative colanic acid biosynthesis acetyltransferase WcaB TERM 3043 2329341 - 2329326 - G 80 -9 -4.19238 | opp_overlap 2329300 2329328 TGGCGAATGGTAAAA TCGTCG CCGG CGACGA CATGTTTGTTAATCA SeD_A2455 2330505 - 2329594 - | putative colanic acid biosynthesis glycosyl transferase WcaA TERM 3044 2330496 - 2330515 + g 77 -4.8 -4.88687 | overlap 2330498 GGCCTACAGTCACAG GCCGCGCC ATCC GGCACGCC TTATTTTTTATTTGG SeD_A2456 2332682 - 2330523 - | tyrosine-protein kinase wzc wzb 2333128 - 2332679 - | low molecular weight protein-tyrosine-phosphatase wzb SeD_A2458 2334273 - 2333134 - | polysaccharide biosynthesis/export protein TERM 3045 2333392 - 2333382 - GH 74 -2.4 -4.99861 | GACGAATCACAAAAA TGCC GCT GGCG TTGGAGGTGGTCAGA SeD_A2459 2334209 - 2334322 + | hypothetical protein TERM 3046 2335145 - 2335170 + Tr 80 -6.9 -4.62069 | gap 1 GCTGGCGTCAATCTC GTGGC-TGGTCA CCT TGACTAAGCCGC TTTTTAGCGTACAGG TERM 3047 2336560 - 2336600 + Tr 76 -11.9 -2.71791 | gap 2, overlap 2336559 CCGGCCTGCTTACCA GGCAG-GCCGGA-GGCGCG TTAGC CTTGCCATCCGGCTCTGCC CTTTGGCCAAAAACT SeD_A2461 2338470 - 2336614 - | protein AsmA TERM 3048 2337100 - 2337117 + g 73 -5.5 -4.55128 | TTCGAGGCGCGTATT GCTCATG TCAA CATGCGC TTTTCCTTTCCAGCT TERM 3049 2338024 - 2337999 - G 80 -8.9 -4.09685 | TTTCATGCTGGAAAA CCAGCACGCTG TCGG CAACGCGCAGG CTACGAATATCAAAC dcd 2339090 - 2338509 - | deoxycytidine triphosphate deaminase udk 2339822 - 2339181 - | uridine kinase SeD_A2464 2340068 - 2339898 - | hypothetical protein TERM 3050 2340837 - 2340857 + r 85 -5.4 -5.31158 | gap 1 ATGTGGAGTGCGGTG CGCCTGCCG CGAA TGG-AGGCG TTTTTAATTTTTTTA SeD_A2467 2343980 - 2343111 - | dna-3-methyladenine glycosylase 2 TERM 3051 2344964 - 2344942 - R 76 -4.7 -4.81249 | GGCGAAACCGAAAAA GGCATCGCC CTACC GGTGCTGCC GTGGTGGAACGCCGT TERM 3052 2345643 - 2345662 + r 86 -11.4 -3.71649 | overlap 2345653 CCTTTCCTTATTTTG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG SeD_A2471 2345819 - 2345703 - | hypothetical protein SeD_A2472 2345907 - 2347148 + | multidrug resistance protein MdtA TERM 3053 2348260 - 2348308 + G 72 -2.2 -4.92239 | overlap 2348262 2348263 2348265 2348275 CGCCACAATTATTCC CGGCGTCGCCGTACCGCTGTCG CTTAT CGGCACCTTTGCGGTGATGGTG TTTTTGGATTTTTCC TERM 3054 2348444 - 2348432 - g 84 -6.2 -5.1286 | opp_overlap 2348432 GAAAAAGGAGAAAAA CCGC TGGCG GCGG CGCTCAAAGGCGCGG TERM 3055 2349685 - 2349669 - g 80 -4.3 -5.1287 | overlap 2349670 TCGATACGGAAAAAA CGCTCGC CCT GCCAGCA GATATTACAACGCAG TERM 3056 2349723 - 2349752 + G 76 -9.9 -3.78934 | overlap 2349724 GTAGTACGCTCGCCT TCCAGGCGGCGCT AGGC AGCACCGTCTGGC TTATTGTCGCCGCCG TERM 3057 2349724 - 2349751 + G 81 -13.4 -2.87146 | overlap 2349723 TAGTACGCTCGCCTT CCAGGCGGCGCT AGGC AGCACCGTCTGG CTTATTGTCGCCGCC mdtB 2347148 - 2350270 + | multidrug resistance protein MdtB TERM 3058 2352193 - 2352182 - g 71 -5.8 -4.2651 | opp_overlap 2352181 2352182, overlap 2352170 AAACAGGCAAAAGAA CCTG GCGC CAGG CTGTTTCTGATGGCG TERM 3059 2353046 - 2353030 - g 76 -3 -5.07486 | gap 1, opp_overlap 2353030 2353032, overlap 2353012 2353032 CATTGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTTGAAG mdtC 2350271 - 2353351 + | multidrug resistance protein MdtC TERM 3060 2354172 - 2354190 + G 86 -12.4 -3.86015 | overlap 2354162 TTTTGCCGGGCGTAT CGGCAGCG GTA TGCTGCCG TTTATGACGCCGGTC TERM 3061 2354672 - 2354692 + G 73 -5.5 -4.57569 | TATGTATGGCGGTTA TTATCGC GCTACCG GCGATAA TTTTTGCCCGCGTGC SeD_A2475 2353348 - 2354760 + | inner membrane transport protein YieO TERM 3062 2355283 - 2355305 + G 72 -4 -4.7254 | overlap 2355274 2355284 TCGTGGCGTTATCAA CGTTGCTGGC CGC GCTGGCGACA TTTTTGCTGGCGCGT SeD_A2476 2354760 - 2356163 + | signal transduction histidine-protein kinase BaeS SeD_A2477 2356160 - 2356882 + | response regulator TERM 3063 2357268 - 2357281 + G 82 -5.3 -4.98857 | GAAAATATCCAGCGC TGGTT AAGC AACCA TTTTTATCGTTGGAT TERM 3064 2357584 - 2357572 - g 79 -3.3 -5.1861 | overlap 2357573 CGGAGCATCAAAAAA TGCAG CGC CTGCG TGAACAAGGTTGGTA SeD_A2478 2357151 - 2358353 + | putative cytoplasmic protein TERM 3065 2358435 - 2358415 - g 100 -4.6 -6.02345 | overlap 2358419 CAACTACAAAAAAAA CAAACCGC TGATT GCGGCCCG TATCGCCGAGGAGAA TERM 3066 2358431 - 2358419 - g 95 -6.2 -5.39407 | overlap 2358415 TACAAAAAAAACAAA CCGC TGATT GCGG CCCGTATCGCCGAGG TERM 3067 2358674 - 2358640 - g 77 -8.4 -4.18018 | opp_overlap 2358639 GGGCTTGAGCGAAAA CCTCGACGGCGCGGCG TTA CGCCACAAGGTTGAGG ATATCTTACGCCGCT SeD_A2479 2358353 - 2359069 + | putative inner membrane protein TERM 3068 2359152 - 2359136 - g 72 -2.1 -4.98255 | overlap 2359137 GTGCAACCACAAAAA TCCCCTC AAT GACGGGC AACGAGAGTGGCATA TERM 3069 2359381 - 2359367 - g 70 -3.4 -4.7254 | overlap 2359368 2359369 AGCGCTGATCAAAAA CTGGCA GCG CGCCCG CCCCCGCTCCACTCA SeD_A2480 2359080 - 2361191 + | hypothetical protein TERM 3070 2361948 - 2361931 - g 71 -6.3 -4.34008 | overlap 2361947 CAGGAAGGAAAAGAA GACGTTG TCGG CAACATC GTGCATAAGCATGAA SeD_A2481 2361307 - 2362668 + | peptidase, U32 family TERM 3071 2362802 - 2362833 + T 100 -9.5 -5.13473 | overlap 2362805 CCAGGAACCACCTCC TTGGCCTGCGTAA TCTCCC TTACGCAGGCTTA TTTTTTGCGTATAAT TERM 3072 2362805 - 2362830 + T 100 -13.4 -4.65666 | overlap 2362802 GGAACCACCTCCTTG GCCTGCGTAA TCTCCC TTACGCAGGC TTATTTTTTGCGTAT SeD_A2483 2363577 - 2363308 - | Tir chaperone TERM 3073 2365225 - 2365211 - g 74 -8.5 -3.99805 | opp_overlap 2365210 CCGGAAAAACTTAAA GCCGC ATTGG GCGGC GTCTCCTATCTTATC SeD_A2484 2364743 - 2365642 + | hypothetical protein TERM 3074 2365658 - 2365679 + F 100 -11.6 -4.78572 | TAACACCAGTCGCTG GCCGGATG CGCTCA CATCCGGC TTTTCTTCGTTGAAC TERM 3075 2367107 - 2367095 - g 83 -6.2 -4.87803 | TATGGCTAAATAAAA GCGG GTTTT CCGC CGGTGAAATAGGCTG TERM 3076 2367167 - 2367188 + G 90 -5.1 -5.24129 | overlap 2367159 2367168 TCCTGTCGCCGATTC TGGTCGG CTCCGTTA CCGACCG TTTTTTCTCAGCGCA TERM 3077 2367621 - 2367637 + G 77 -3.7 -4.99312 | GCTGGTTCTGCTGCG CGATAAA AAC TTTCTCG TTTTCTTCTTCTGTT TERM 3078 2367747 - 2367729 - g 77 -4.5 -4.86621 | opp_overlap 2367738 AGTGGGAATGAAAAA CGCCACC GGCTG GATGACG CTCGGCCAGTTCTCT TERM 3079 2367851 - 2367861 + G 81 -2.4 -5.4251 | overlap 2367842 TTATTACCGCCGCGA TCCG CTA CGGC TTTTTTGTCTATGGC yegT 2367001 - 2368272 + | nucleoside transporter SeD_A2487 2368269 - 2369273 + | ADP-ribosylglycohydrolase family protein SeD_A2488 2369270 - 2370235 + | kinase, PfkB family SeD_A2489 2370955 - 2370209 - | transcriptional regulator, GntR family thiD 2371791 - 2370991 - | phosphomethylpyrimidine kinase TERM 3080 2371446 - 2371457 + g 74 -7.2 -4.08216 | opp_overlap 2371446, overlap 2371444 CAGAGGGCGAGAGCA GCGG ATCG CCGC TTTTCGCCAGCATCA thiM 2372575 - 2371778 - | hydroxyethylthiazole kinase SeD_A2493 2372859 - 2372674 - | hypothetical protein SeD_A2494 2372985 - 2373299 + | hypothetical protein TERM 3081 2373337 - 2373300 - T 77 -10.7 -3.37796 | opp_overlap 2373300 2373297 2373296, overlap 2373305 2373307 2373326 TTTTATCATCGATAA TGATATACGCACTCTTT CTAT AAAGAGTGCGTACCGCA TAAATTTAATTATAA TERM 3082 2373332 - 2373305 - T 93 -15.8 -2.97245 | opp_overlap 2373300 2373297 2373296, overlap 2373300 2373307 2373326 TCATCGATAATGATA TACGCACTCTTT CTAT AAAGAGTGCGTA CCGCATAAATTTAAT TERM 3083 2373330 - 2373307 - T 85 -14 -3.03741 | opp_overlap 2373300 2373297 2373296, overlap 2373305 2373300 2373326 ATCGATAATGATATA CGCACTCTTT CTAT AAAGAGTGCG TACCGCATAAATTTA SeD_A2495 2374365 - 2373343 - | hypothetical protein SeD_A2496 2376867 - 2374381 - | fimbrial usher protein SeD_A2497 2377576 - 2376896 - | gram-negative pilus assembly chaperone TERM 3084 2377544 - 2377519 - G 74 -7.5 -4.18367 | TACCATATATATAAA TGCCGCTCCAC GCAG GCATAGCGGCA CAAGCCAGGCATAAT TERM 3085 2377624 - 2377605 - R 93 -12.2 -3.77193 | ATAAAAGAGATACAA GCGGCTAA AAGC TTAGCCGC CAAAAAACGATTGTT TERM 3086 2377644 - 2377632 - R 72 -2.7 -5.02074 | overlap 2377633 TTAGCCGCCAAAAAA CGATT GTT AATCA GTTAATACCGTCATC SeD_A2498 2378171 - 2377638 - | putative fimbrial subunit protein TERM 3087 2378431 - 2378402 - R 100 -18.1 -5.82036 | ACAACAAATAAAAAA GCCCATATCATTG ATAT CAATGATATGGGC CTGCGGAATTAATAA SeD_A2499 2378731 - 2378450 - | hypothetical protein TERM 3088 2378938 - 2378983 + r 83 -10.7 -3.82946 | opp_overlap 2378941 2378943 2378977, overlap 2378941 2378943 2378945 GGGCTATTATTTTAT TAATACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTCATA TTCTCTTTGGAATAC TERM 3089 2378980 - 2378941 - R 90 -14.6 -3.17212 | opp_overlap 2378941 2378938 2378943 2378945, overlap 2378943 2378977 CTATTATTTTATTAA TACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTC ATATTCTCTTTGGAA TERM 3090 2378941 - 2378981 + r 79 -10.8 -3.49634 | gap 1, opp_overlap 2378941 2378943 2378977, overlap 2378938 2378943 2378945 CTATTATTTTATTAA T-ACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTCA TATTCTCTTTGGAAT TERM 3091 2378978 - 2378943 - R 100 -17.2 -3.1478 | opp_overlap 2378943 2378941 2378938 2378945, overlap 2378941 2378977 ATTATTTTATTAATA CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG TCATATTCTCTTTGG TERM 3092 2378943 - 2378978 + r 93 -15 -2.88134 | opp_overlap 2378941 2378943 2378977, overlap 2378941 2378938 2378945 ATTATTTTATTAATA CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG TCATATTCTCTTTGG TERM 3093 2378945 - 2378976 + r 78 -11.8 -2.97857 | opp_overlap 2378943 2378941, overlap 2378943 2378941 2378938 TATTTTATTAATACA TTCACTGCATCAAT ATAT ATTAATGCAGTGAA TGTCATATTCTCTTT SeD_A2500 2380118 - 2379009 - | mrp protein TERM 3094 2380814 - 2380852 + G 81 -2.2 -5.28942 | GAACCGAAATCCGTG GTGTCCGGCGCGACGC CGGTAAT GCGTGACTCCGAGCAC TTTTTCTTTGACCTG TERM 3095 2381701 - 2381687 - g 70 -7 -4.08557 | GTGGCTAAACAAGAA GGCCGC GAC GCGGAC CTGCAGGCCATTTGC TERM 3096 2382199 - 2382211 + G 70 -9.1 -3.63627 | CGCCAACCTCGCGCC GCGCA AAA TGCGC TTTGGCGTCTCCGAG metG 2380283 - 2382316 + | methionyl tRNA synthetase TERM 3097 2382341 - 2382324 - f 95 -12.7 -3.93237 | opp_overlap 2382324, overlap 2382317 TGAAATAAGCAACAA GCCGGAG CATG CTCCGGC TTTTTTAACCGCTTA TERM 3098 2382324 - 2382341 + F 100 -12.7 -5.03145 | opp_overlap 2382317 2382324 TGAAATAAGCAACAA GCCGGAG CATG CTCCGGC TTTTTTAACCGCTTA SeD_A2502 2382557 - 2383015 + | YehR TERM 3099 2383059 - 2383078 + F 100 -11.4 -5.01553 | overlap 2383053 GGTAAAGTCGCTCAG GGCGCTGC TTCG GCAGCGTC TTTTCTTTATGAATT TERM 3100 2383117 - 2383103 - f 76 -4.2 -5.055 | overlap 2383105 TGAATTCCGAAAAAA GACAGC CTC GCTGTA AGTCCCCTCGCCAAA TERM 3101 2383115 - 2383105 - f 71 -6.8 -4.15235 | overlap 2383103 AATTCCGAAAAAAGA CAGC CTC GCTG TAAGTCCCCTCGCCA SeD_A2503 2383295 - 2383717 + | hypothetical protein SeD_A2504 2384241 - 2383774 - | putative cytoplasmic protein SeD_A2505 2385007 - 2384288 - | DNA-binding response regulator SeD_A2506 2386689 - 2385004 - | sensor histidine kinase TERM 3102 2386856 - 2386841 - H 79 -3.2 -5.31456 | TTAATGCATAAAAAA CAGGCA AAAC TTCCTG GTTCGTAAAAGAGCG TERM 3103 2387514 - 2387527 + G 78 -6.7 -4.56597 | overlap 2387520 GCATTCGCTTAGCCA GTTCC GCCC GGAAC TTTTTGACGGCAAGA TERM 3104 2387578 - 2387568 - g 74 -6.8 -4.37092 | overlap 2387569 2387571 2387573 ATGGTGCGGAGAAAA CCAG ACG CTGG CGCAGCAGCAGCAAC SeD_A2507 2386912 - 2387643 + | transcriptional regulator, MerR family protein SeD_A2508 2388522 - 2387791 - | inner membrane ABC transporter permease protein YehW SeD_A2509 2389453 - 2388506 - | glycine betaine/carnitine/choline transport ATP-binding protein opuCA TERM 3105 2388846 - 2388870 + g 95 -17.9 -2.80816 | opp_overlap 2388843 ATCAGCACCAGATGG TCGGCGAGGCG TAG CGCCTCGTCGA TGTCGTGCGTCACCA SeD_A2510 2390615 - 2389446 - | inner membrane ABC transporter permease protein YehY TERM 3106 2390392 - 2390363 - G 81 -3.6 -5.22006 | gap 2 GCATGACAATAAAAA GCGT-CTG-CGCCA TCAT CAGCGTCAGTACGC TACCGCGTTTACCGG SeD_A2511 2391536 - 2390619 - | amine ABC transporter, periplasmic amine-binding protein TERM 3107 2391296 - 2391273 - G 76 -3 -5.03314 | opp_overlap 2391278 2391279, overlap 2391278 TTCATCTTTAAAAAA GAACGCCCCG TTAC CGGTGTATTC CGGATAGATATCCAG SeD_A2512 2393984 - 2391717 - | periplasmic beta-glucosidase TERM 3108 2394403 - 2394425 + G 88 -11.2 -4.18164 | CAAGGGTTTCCGTTC CGGTCAGGGC GAC GCGCTGGCCG TTGTTTTCCCGGGTT TERM 3109 2395047 - 2395064 + G 71 -4.7 -4.66833 | overlap 2395048 TTGAATCTTCCGGCT GCGCCGG AAAA CTGGCGG TTTTTGCCGTTCGCC TERM 3110 2395521 - 2395533 + G 70 -6.9 -4.19678 | opp_overlap 2395520 2395521 ATGAATTTTTTAAAT CCGCT GAG GGCGG TTTCTTCACCTGTAC TERM 3111 2395584 - 2395604 + G 70 -9.7 -3.44146 | CCTTCCTGCACCGCT TCGCCGC TGCTGGC GCGGCGA TTCGTTATCAGGCCG SeD_A2513 2394281 - 2396011 + | D-lactate dehydrogenase SeD_A2514 2396978 - 2396070 - | D-alanyl-D-alanine endopeptidase TERM 3112 2396113 - 2396129 + g 91 -6.5 -5.2197 | overlap 2396097 2396108 GCGCTGGCGCTGGCT GCCGC CATTTGC GCGGC TTTTTGCTTTTTATA TERM 3113 2397136 - 2397159 + r 71 -6.8 -4.07687 | gap 1, overlap 2397153 2397154 CGCTACAGAAGAATC GTCAGCAAATG CTG CAT-TGCTGGC TTTTGCGCCAGCCCT SeD_A2515 2397770 - 2397183 - | inner membrane protein YohC TERM 3114 2397693 - 2397705 + g 73 -6.3 -4.44277 | GTGCGTATAGTGATG CGAAA CGG TTTCG TTTTCGCTTTTGATC TERM 3115 2397881 - 2397866 - H 71 -6.8 -4.07885 | gap 1, opp_overlap 2397857 TAGTCTCCGGCAAAA CGTCGGC TTT GCCG-CG CACGCCTCTTGCCAG SeD_A2516 2397929 - 2398498 + | inner membrane protein YohD TERM 3116 2398502 - 2398545 + T 74 -5.8 -4.72188 | opp_overlap 2398500 2398501 2398524 2398525, overlap 2398533 GAGGCCCGTTAAACC CGATGGTATCCGGATGGC ATAACGCC GCCATCCGGCACCCGGCG TTTATTTTGCGTTGA SeD_A2517 2399329 - 2398547 - | oxidoreductase, short chain dehydrogenase/reductase family SeD_A2518 2400810 - 2399374 - | efflux transporter, outer membrane factor TERM 3117 2399860 - 2399848 - G 73 -6.2 -4.39426 | GATATCGGGATAAAA CGCG GCCTT CGCG GCGTCAATGCTGCTC TERM 3118 2400313 - 2400334 + g 87 -8.6 -4.58395 | TTTGACCGCCCCGAT CCGCGCAG TAACTT CAGCGCGG TTTTTCCCCCATAAA SeD_A2519 2400998 - 2400861 - | hypothetical protein SeD_A2520 2401001 - 2401198 + | hypothetical protein TERM 3119 2401214 - 2401250 + T 77 -10.8 -3.30771 | overlap 2401213 GATGATTTTCTGATT CCTGCGCCGGGCAG CGATAGTAT CTGCCCGGCACACG TTCTGGACGCTGTAG SeD_A2521 2402207 - 2401269 - | tRNA-dihydrouridine synthase C TERM 3120 2401953 - 2401968 + g 77 -8.2 -4.07568 | ATACGATCCCAACGC CGTCGC CCGC GCGGCG TTTTCCGCCAGCCAC TERM 3121 2402250 - 2402230 - R 100 -11.9 -5.58454 | opp_overlap 2402232 TCCACAGCAAAAAAA GAGGCGCTA TCA TAACGCCTC TCTGCGATGAGCAAA SeD_A2522 2403509 - 2402316 - | 3-hydroxybenzoate-6-hydroxylase maiA 2404168 - 2403524 - | maleylacetoacetate isomerase SeD_A2524 2404878 - 2404177 - | fumarylacetoacetate hydrolase family protein gtdA 2405931 - 2404894 - | gentisate 1,2-dioxygenase SeD_A2526 2407301 - 2405943 - | 4-hydroxybenzoate transporter TERM 3122 2407514 - 2407492 - H 70 -9.8 -3.01712 | overlap 2407470 TGCGCTGGGCGAACA GGGCAACCTG ACG CACGTCGCCC GGATGATGAATATCT TERM 3123 2408523 - 2408542 + G 84 -5.7 -5.10461 | TTTTGTATTGATTTA TGCCTGT TTGTAT GCAGGCA TTTTTCTTGCATCAC SeD_A2528 2408467 - 2408865 + | membrane protein YohJ TERM 3124 2408887 - 2408906 + G 75 -6.4 -4.56597 | ATATCTGGTGGTCGT TACCGCTG ACGC TGGCGGTA TTTTTCGCCGCCCGC TERM 3125 2408910 - 2408935 + G 86 -10.3 -4.14511 | ACGCTGGCGGTATTT TTCGCCGCCCG CAGA CTGGCGGCGCA TTTTAAAATGCCGTT SeD_A2529 2408862 - 2409557 + | hypothetical protein cdd 2409711 - 2410595 + | cytidine deaminase TERM 3126 2411363 - 2411373 + G 95 -8.2 -5.00884 | opp_overlap 2411363 CTCTATATTTTTAAA CGCG AAC CGCG TTTTTTAGGCCCGCT SeD_A2531 2410772 - 2411491 + | vancomycin sensitivity SeD_A2532 2411494 - 2411733 + | putative inner membrane protein TERM 3127 2412419 - 2412403 - g 76 -5 -4.75372 | overlap 2412405 ACCATTTACGAAAAA CAGCCG CAGCC CGGCGG ATGGCTGCGTCACGG TERM 3128 2412430 - 2412405 - g 71 -7.5 -3.99327 | overlap 2412403 CATTTACGAAAAACA GCCGCAGCC CGGCGGAT GGCTGCGTC ACGGCATCCCGGCAT SeD_A2533 2411938 - 2413179 + | pyridine nucleotide-disulphide oxidoreductase domain protein TERM 3129 2413661 - 2413647 - g 71 -4.2 -4.57073 | opp_overlap 2413651 2413654, overlap 2413650 GAGCTGGTTGAAAAA TACTGC CGC GCCGTA AAACGCGGCTCATCT SeD_A2534 2413173 - 2414408 + | dihydroorotate dehydrogenase family protein TERM 3130 2414450 - 2414422 - T 74 -10.2 -3.16683 | gap 1, opp_overlap 2414423 AGCTCACGGTATGAA GCCCGGCGC-GCA GTTT CGCTGCGCCGGGT TATCTGATAAGCAAG TERM 3131 2414423 - 2414449 + T 90 -13 -3.54475 | gap 1, opp_overlap 2414422 GCTCACGGTATGAAG CCCGGCGC-GC AGTTTC GCTGCGCCGGG TTATCTGATAAGCAA SeD_A2535 2415493 - 2414483 - | galactoside transport system permease protein MglC TERM 3132 2415531 - 2415549 + r 79 -8.2 -4.25052 | opp_overlap 2415525 2415529 2415531, overlap 2415525 2415526 TGCAAAGAAGCAAGA CGCAAAAT TTC GTTTTGCG TTGTTGTTTTAGTAT TERM 3133 2417264 - 2417280 + r 93 -10.1 -4.57569 | TGCCGTCAGCCGCGC CCTTGCC TTC GGCGAGG TTTTTCGCCAGATCG TERM 3134 2418609 - 2418592 - R 72 -6.3 -4.21989 | overlap 2418582 CACAATGTTAATAAA CTGTGAA TTTA CTCACAG ATTGAAAACGGTTAC galS 2419660 - 2418638 - | transcriptional regulator GalS SeD_A2541 2420952 - 2419810 - | hypothetical protein TERM 3135 2420182 - 2420164 - G 100 -12.4 -5.06414 | CGCCTGCAATAAAAA GGCGCACC AGC GGTACGCC CAGTCCAGCCGCCAT folE 2421635 - 2420967 - | GTP cyclohydrolase I fghA 2421965 - 2422822 + | S-formylglutathione hydrolase SeD_A2544 2423245 - 2422811 - | putative transcriptional regulator SeD_A2545 2424638 - 2423205 - | L-serine ammonia-lyase TERM 3136 2423701 - 2423674 - GH 71 -10.6 -2.70354 | overlap 2423671 2423679 2423687 GGCGTGACAAATTTA TCATACCAGCAG AGCG CTGCCGGAATGA TGCCGCACGCGCCAT serB 2424789 - 2425676 + | phosphoserine phosphatase SerB SeD_A2547 2425709 - 2427031 + | regulatory protein UhpC TERM 3137 2427072 - 2427032 - T 77 -10.3 -3.30124 | opp_overlap 2427036, overlap 2427034 2427035 CTGCATCGGTTATAA CATTCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGTCTC TGTCAGAAACGGTAA TERM 3138 2427070 - 2427034 - T 83 -12.9 -3.21924 | opp_overlap 2427036, overlap 2427032 2427035 GCATCGGTTATAACA TTCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGTC TCTGTCAGAAACGGT TERM 3139 2427069 - 2427035 - T 95 -16.4 -2.5294 | opp_overlap 2427036, overlap 2427034 2427032 CATCGGTTATAACAT TCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGT CTCTGTCAGAAACGG TERM 3140 2427036 - 2427068 + T 100 -19.2 -2.98823 | opp_overlap 2427035 2427034 2427032 ATCGGTTATAACATT CTGGCGACAGCGGC AAAAC GCGGCTGTCGCCAG TCTCTGTCAGAAACG SeD_A2548 2429027 - 2427075 - | colicin I receptor TERM 3141 2429336 - 2429319 - R 100 -11.3 -6.12458 | GAAAAAAACAAAAAA CCCTCTC GAAT GAGAGGG TTAGAAGAGTCAGAT SeD_A2549 2430883 - 2429414 - | lysine-specific permease TERM 3142 2429849 - 2429839 - G 71 -8.2 -3.85698 | overlap 2429840 CGGTGGTGGCATAAA GCGC ATT GCGC GGTACGCCGCCGCGG TERM 3143 2430741 - 2430728 - G 74 -3.1 -4.92791 | gap 1, overlap 2430730 CAGAATATAAGAAAA CA-GCG CGC CGCCTG GCCCCGCCTGAGAAA TERM 3144 2431051 - 2431038 - R 71 -3.7 -4.80882 | opp_overlap 2431040, overlap 2431039 2431040 AGCGGATACTAAAAA TGGCG ATGC CGCCC GGGCAGCCCTCCTCT SeD_A2550 2431936 - 2431073 - | transcriptional regulator, LysR family SeD_A2552 2432083 - 2431964 - | hypothetical protein TERM 3145 2433023 - 2433008 - gH 76 -3.2 -5.09225 | AGCGCATTGAAAAAA GCGG GGGCGAAA CCGC TGCTGATGGCGCTGG SeD_A2551 2432057 - 2433106 + | inner membrane protein YeiH TERM 3146 2433258 - 2433275 + G 70 -7 -4.07568 | overlap 2433257 GCGCGGCTGAAATTG GCGCAA CGGCCT TTGCGC TTTTCACAAAAAACC TERM 3147 2433480 - 2433443 - g 83 -7.8 -4.58283 | gap 1, overlap 2433469 GAAGCGCTGGAAAAA TCAC-GCGATGCCTTTC TCGAT GAAATGCAGCGCTGTGA ACAACTCGGCTTAAC SeD_A2553 2433185 - 2434042 + | endonuclease 4 TERM 3148 2434061 - 2434098 + T 95 -12.9 -3.73486 | opp_overlap 2434071, overlap 2434071 TCAATGTTCTTCAGG CAATAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTAGCG TGTTTCTCTTATGCC TERM 3149 2434088 - 2434071 - T 100 -11.3 -5.4833 | opp_overlap 2434061 2434071 TCAGGCAATAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTAGCGTGTTT TERM 3150 2434071 - 2434088 + T 100 -11.3 -5.10077 | opp_overlap 2434071, overlap 2434061 TCAGGCAATAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTAGCGTGTTT SeD_A2554 2435795 - 2434107 - | pts system fructose-specific eiibc component fruK 2436750 - 2435812 - | 1-phosphofructokinase fruB 2437880 - 2436750 - | PTS system fructose-specific phosphotransferase enzyme IIA component TERM 3151 2437781 - 2437807 + g 71 -10.1 -3.55563 | gap 1 AGCCGCCCGCCACAT TCCCCGCCTGCG CTAA CGC-GGCGGCGA TTTGCCGAATGGACT TERM 3152 2437967 - 2437932 - g 89 -2.7 -5.67967 | gap 2 ACTATGAGAAAAAAA GCGCCAATCTGAGTTAT CAAA AAAAC-CAGATC-GCGC TGAAACGTCTCAAGA SeD_A2557 2437901 - 2438032 + | hypothetical protein TERM 3153 2438080 - 2438102 + F 93 -6.2 -5.64421 | opp_overlap 2438080 AACAGACCCTCAATA GCTGACGCAT AAA AGGCTTCAGC TTTTTTCTTTCAGCT SeD_A2558 2438117 - 2438239 + | hypothetical protein TERM 3154 2439144 - 2439169 + G 87 -13.3 -3.18681 | overlap 2439145 GCTTTTATGCGGGGA TGTTGCTGGCG CACG CGCCGGCAACG TTACTCGGCTTGCAG TERM 3155 2439145 - 2439168 + G 81 -14.6 -2.50994 | overlap 2439144 CTTTTATGCGGGGAT GTTGCTGGCG CACG CGCCGGCAAC GTTACTCGGCTTGCA SeD_A2559 2438249 - 2439430 + | sugar efflux transporter B SeD_A2560 2440159 - 2439494 - | putative inner membrane protein TERM 3156 2439702 - 2439722 + g 72 -2.6 -4.83615 | AAGGATAGCTTTGCA TATGTTTC CGTTT GTAACATA TTTTTATGCACGCTA SeD_A2561 2440283 - 2440161 - | hypothetical protein TERM 3157 2441001 - 2440983 - H 83 -4.6 -5.27335 | overlap 2440964 TTGTCCAAAGAAAAA TCCAGATT TAA AATGTGGA CGTCATCATGATCAG TERM 3158 2441447 - 2441421 - g 89 -13.8 -3.59247 | overlap 2441412 GAAGAACGTTTCAAA GGCGACGATATC GTT GATACCGTCACC CTGAGCCGTCGCGGC SeD_A2562 2441250 - 2441822 + | hypothetical protein TERM 3159 2441850 - 2441864 + F 82 -5.6 -5.10665 | overlap 2441834 2441849 TCGGCTGCGCCCCAG GGCGCA GTC TGCCCC TTTTATTTATTGACT TERM 3160 2442547 - 2442495 - g 71 -4.6 -4.64676 | gap 1, overlap 2442499 TCATCGCCAATAAAA CCGACCGCGCCAC-GGCGCAGAGCG ATGC CGCCCTGCAACAGTGGTGGCGACAG TACGGCGGCGATCGT SeD_A2563 2442035 - 2443021 + | cobalamin synthesis protein, P47K SeD_A2564 2443024 - 2443770 + | inner membrane protein YeiU TERM 3161 2443823 - 2443784 - f 70 -8.8 -3.38088 | gap 1, opp_overlap 2443786, overlap 2443786 AACCTATGTAATTAA CATTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAATT TATGATGATATTCCC TERM 3162 2443821 - 2443786 - f 77 -11.4 -3.25652 | gap 1, opp_overlap 2443786, overlap 2443784 CCTATGTAATTAACA TTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAA TTTATGATGATATTC TERM 3163 2443786 - 2443821 + F 100 -13.6 -4.01853 | gap 1, opp_overlap 2443784 2443786 CCTATGTAATTAACA TTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAA TTTATGATGATATTC TERM 3164 2444732 - 2444718 - g 82 -5.6 -5.0538 | CCGTACTGGAAAAAA CGCTAC AAT GAAGCG CGTCGAGTTCTGAGC SeD_A2565 2444184 - 2444756 + | lipoprotein spr TERM 3165 2444803 - 2444830 + F 74 -11.4 -2.90804 | opp_overlap 2444808, overlap 2444808 CTGATGAGACGACAT AAAAAGCACTGC TTCG GCAGTGCTTTTG CTTATTATCCCTTCT TERM 3166 2444825 - 2444808 - f 100 -11.3 -5.02502 | opp_overlap 2444808 2444803 GAGACGACATAAAAA GCACTGC TTCG GCAGTGC TTTTGCTTATTATCC TERM 3167 2444808 - 2444825 + F 95 -11.3 -4.59414 | opp_overlap 2444808, overlap 2444803 GAGACGACATAAAAA GCACTGC TTCG GCAGTGC TTTTGCTTATTATCC TERM 3168 2445045 - 2445019 - f 74 -10.2 -3.22653 | overlap 2445017 2445020 ACTACTGCGACAATA CGCTTTCCTGCG CAT CACAGAAAAGCA TGACTATCCGAGGTA TERM 3169 2445044 - 2445020 - f 73 -11.5 -2.53271 | overlap 2445019 2445017 CTACTGCGACAATAC GCTTTCCTGCG CAT CACAGAAAAGC ATGACTATCCGAGGT SeD_A2566 2445130 - 2446686 + | protein rtn TERM 3170 2446876 - 2446862 - g 77 -8.6 -4.10552 | GCCCAGGAAATCAAA GAAAGC TAC GCTTTC GCCGTACTCGGCGAA SeD_A2567 2446793 - 2448598 + | bacterial extracellular solute-binding protein, family 5 TERM 3171 2449311 - 2449323 + G 70 -6.9 -4.08767 | TACCGGTGTTGGCGA CCGTC ATC GGCGG TTTTGCCGCCCTGAC SeD_A2568 2448608 - 2449702 + | inner membrane ABC transporter permease protein YejB TERM 3172 2450683 - 2450703 + G 71 -8.1 -3.80573 | CTGCTGATTTTTATC GGCGAAGCG GTA CGCGACGCC TTTGATCCTGCTAAG SeD_A2569 2449702 - 2450727 + | inner membrane ABC transporter permease protein YejE TERM 3173 2451085 - 2451068 - g 73 -5.5 -4.59109 | opp_overlap 2451058 CATACGCTGGAAAAA CAGCTCT ATGA AGTGCTG TCGCTCCATCGGGGA TERM 3174 2451722 - 2451705 - g 71 -4.8 -4.60487 | opp_overlap 2451705 2451721 CAGGATCGGGAAAAA GCACCA CCGGTC TGGCGC TGTTACGGCTTATCC SeD_A2570 2450729 - 2452318 + | glutathione import ATP-binding protein GsiA SeD_A2571 2452666 - 2452322 - | hypothetical protein bcr 2454247 - 2453057 - | bicyclomycin resistance protein TERM 3175 2453665 - 2453687 + g 75 -11.2 -3.44848 | opp_overlap 2453662 2453663, overlap 2453663 GAATATGAAAAGGCT GACGCCGCTC AAC GGGCAGCGTC TCTTTAATCAGAGCA rsuA 2454970 - 2454275 - | ribosomal small subunit pseudouridine synthase A TERM 3176 2455018 - 2455002 - H 72 -8.7 -3.81258 | GTAATAATACGGAAA TCGGGCA TTC TACCCGA AAAAAGGGAATTGCT SeD_A2574 2455122 - 2456882 + | putative helicase SeD_A2575 2457007 - 2457291 + | ribosomal L25p family protein TERM 3177 2457306 - 2457337 + T 78 -12.4 -2.71246 | opp_overlap 2457314, overlap 2457314 ATCGCCTGGAAGTTG AAGAAAAACCCCGC CCCG GCGGGGTTTTTTTA TGCGTTTAATTGAAT TERM 3178 2457329 - 2457314 - T 100 -11.8 -5.10208 | opp_overlap 2457306 2457314 GAAGTTGAAGAAAAA CCCCGC CCCG GCGGGG TTTTTTTATGCGTTT TERM 3179 2457314 - 2457329 + T 100 -11.8 -5.68039 | opp_overlap 2457314, overlap 2457306 GAAGTTGAAGAAAAA CCCCGC CCCG GCGGGG TTTTTTTATGCGTTT SeD_A2576 2458020 - 2457400 - | putative inner membrane protein TERM 3180 2457958 - 2457943 - G 72 -4 -4.8083 | gap 1 CAACATCATCAAAAA TGCG-AC AAT GTGCGCA TACAAAACCTGCCGA ndpA 2459055 - 2458048 - | nucleoid-associated protein NdpA SeD_A2578 2459235 - 2459462 + | hypothetical protein TERM 3181 2459997 - 2460018 + G 70 -5.1 -4.50988 | overlap 2459999 2460002 2460006 CACGCGCCGTCGCCA TTTCGCAAG GCCG CTTGCGGCA TTCTTTTTCGTCTCC TERM 3182 2460002 - 2460021 + G 72 -2 -4.85177 | overlap 2459999 2459997 2460006 GCCGTCGCCATTTCG CAAGGCCG CTTG CGGCATTC TTTTTCGTCTCCTTT SeD_A2579 2459494 - 2461254 + | inner membrane protein YejM TERM 3183 2461421 - 2461438 + T 100 -9.1 -5.76633 | opp_overlap 2461420 2461421 AATTCCCCTTAAAAG CCAGCCT GCCA GGGCTGG TTTTTTTATATATCC SeD_A2582 2464391 - 2462025 - | leucine-rich repeat protein TERM 3184 2463971 - 2464005 + g 71 -10.6 -3.28866 | overlap 2463970 2463968 2463972 CCGCGTGTCCTGTGC CCTCCTCACCCTGTGC TGT GTCCAGGGTGAGGCGA TGTGTTTCACTGTAC TERM 3185 2463972 - 2464004 + g 81 -14.1 -2.56838 | overlap 2463971 2463970 2463968 CGCGTGTCCTGTGCC CTCCTCACCCTGTGC TGT GTCCAGGGTGAGGCG ATGTGTTTCACTGTA TERM 3186 2464930 - 2464918 - H 73 -10.5 -3.10344 | opp_overlap 2464916 CTCTGATTTAAGATA CGCCG CAT CGGCG AATAATGTGTCATCT TERM 3187 2465618 - 2465634 + H 72 -5.8 -4.38927 | opp_overlap 2465615, overlap 2465619 2465624 GCGCGGCAATCAGTT TGCGGA CAAAC TCCGCG TTTGTTGTCTGAAGC TERM 3188 2466028 - 2466053 + G 73 -5.9 -4.4648 | GCTGTGTCAGCCGAC GCCGCGCTGGC TGAT GCCTCCCCGGC TTTTGTGGTCGCCGT TERM 3189 2466147 - 2466130 - g 77 -8.4 -4.08064 | opp_overlap 2466130 AATTCCCCTTGAAAA CCAGCC TGTCAG GGCTGG TTTTTTTATGCCTAC TERM 3190 2466130 - 2466147 + G 100 -9.1 -5.64274 | opp_overlap 2466130 AATTCCCCTTGAAAA CCAGCCT GTCA GGGCTGG TTTTTTTATGCCTAC SeD_A2586 2465981 - 2466358 + | putative virulence protein MsgA SeD_A2587 2467107 - 2466550 - | putative outer membrane protein SeD_A2588 2467303 - 2467449 + | hypothetical protein TERM 3191 2467713 - 2467723 + F 74 -6.8 -4.3534 | TCAGCTAATTACTCG CCTG TCA CAGG TTTTACTACTTACCC SeD_A2589 2467843 - 2468490 + | nitrate/nitrite response regulator protein NarP TERM 3192 2468527 - 2468494 - T 100 -16.7 -3.82205 | gap 1, opp_overlap 2468491 2468490 2468488, overlap 2468498 GGAATACAGTAACAA GCCAGGCCCGATGGCG CCA CGCCACCGGGCC-GTC AGGGTCTTATTTCTC TERM 3193 2468524 - 2468498 - T 100 -21.6 -2.68142 | opp_overlap 2468491 2468490 2468488, overlap 2468494 TACAGTAACAAGCCA GGCCCGATGGCG CCA CGCCACCGGGCC GTCAGGGTCTTATTT SeD_A2590 2469577 - 2468534 - | cytochrome c-type biogenesis protein H2 TERM 3194 2468786 - 2468801 + g 75 -6.1 -4.56597 | CGCCTCCGCGTAGCC CAGCG CCGCAT CGCTG TTTTTCGGGGCCAGA TERM 3195 2469194 - 2469148 - G 100 -15.6 -3.53012 | opp_overlap 2469167, overlap 2469122 CGCGCGCGCCGCAAA CCGGGGTGTCCGCCGGCAGCGG TTC CCGGCGCAGGCGCACCCGCCGG CGCGTGCGGGCAACG SeD_A2591 2470131 - 2469574 - | thiol:disulfide interChange protein DsbE ccmF 2472059 - 2470128 - | cytochrome c-type biogenesis protein CcmF SeD_A2593 2472556 - 2472056 - | ABC family protein ccmD 2472726 - 2472553 - | heme exporter protein CcmD TERM 3196 2472723 - 2472712 - G 100 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TACC CGCC CATGGCGAAAAAATC TERM 3197 2472747 - 2472737 - R 72 -3.2 -5.03314 | CCCATGGCGAAAAAA TCGC TCC ACGA TGAAAATGCCGGACT SeD_A2595 2473508 - 2472762 - | ABC family protein ccmB 2474210 - 2473551 - | heme exporter protein CcmB ccmA 2474830 - 2474207 - | heme ABC exporter, ATP-binding protein CcmA TERM 3198 2474554 - 2474537 - G 71 -4.7 -4.56597 | opp_overlap 2474547, overlap 2474539 GCCGGGGTGGAAAAA GTGCAGG TTCT CCCGCGC CGTCAGGCGGGATTT TERM 3199 2474661 - 2474703 + g 75 -6 -4.56775 | opp_overlap 2474653 CAGTACACCTCCCCG CCGTCCGGGCGCGCCAGC CCGGTCA GCAGGCGCAGCAGGGTGG TTTTTCCGGCGCCGT napC 2475447 - 2474845 - | cytochrome c-type protein napC napB 2475906 - 2475457 - | periplasmic nitrate reductase, diheme cytochrome c subunit TERM 3200 2475562 - 2475548 - G 70 -7 -4.09117 | TGCAGGCAGAAATAA CGACGC GGC GCGACG TTGCCCGACACTTTA SeD_A2600 2476891 - 2476022 - | ferredoxin-type protein NapH TERM 3201 2476767 - 2476754 - G 73 -5.9 -4.43272 | ATGCAAAACCCAAAA GCCCA GCCA CGGGC CGCTGAGAAACATCC TERM 3202 2476822 - 2476843 + g 86 -6.5 -5.00616 | gap 1, opp_overlap 2476796 2476816 2476819, overlap 2476823 GGCGTAACACCAGCC AGC-GGTGGC TAC GCCACCAGCC TTTTTTCGCCCGCGC TERM 3203 2476823 - 2476842 + g 71 -10 -3.60048 | gap 1, opp_overlap 2476816 2476819, overlap 2476822 GCGTAACACCAGCCA GC-GGTGGC TAC GCCACCAGC CTTTTTTCGCCCGCG SeD_A2601 2477573 - 2476878 - | ferredoxin-type protein NapG TERM 3204 2477439 - 2477461 + g 83 -10.4 -3.92324 | GCCAGGCGGACGCAG CCGCACGCCC GTT GCGCGCGCGG TTTGCTGTTGCAAGC napA 2480066 - 2477580 - | periplasmic nitrate reductase, large subunit TERM 3205 2478446 - 2478470 + g 71 -7.2 -4.06419 | gap 2, overlap 2478444 GCCAGAACTGCGTGC GGCG-TT-CGGC GTT GCCGTAAGCGCC TTCTTTCTCAACCCA napF 2480807 - 2480316 - | ferredoxin-type protein NapF SeD_A2605 2481209 - 2481715 + | ecotin SeD_A2606 2483558 - 2481915 - | ABC transporter ATP-binding protein YojI TERM 3206 2482181 - 2482191 + g 100 -8.2 -5.49809 | opp_overlap 2482153 CCAGCGCCAGCAGCA GCGC AAT GCGC TTTTTTTGCCCTTTC TERM 3207 2482515 - 2482503 - G 74 -3.3 -4.8622 | overlap 2482505 GCCGCCAATTAAAAA CAGCA GTT CGCCG CGGTGAATCGTCAGG SeD_A2607 2484284 - 2483634 - | alpha-ketoglutarate-dependent dioxygenase AlkB SeD_A2608 2485345 - 2484287 - | regulatory protein ada TERM 3208 2485026 - 2484996 - G 73 -6.1 -4.41348 | overlap 2484992 2485011 CTCGCTTTAAACAAA CGGTGCAGATGAA ACGGA CTCATCGCCACCG CCTGCGCCAGAGACG TERM 3209 2485214 - 2485190 - G 74 -2.1 -5.00616 | overlap 2485208 CGCGTTGGCAAAAAA GCGAACATT TTTACGT AACGCCCGC TTCGAGCGACATGAA TERM 3210 2485262 - 2485243 - G 74 -2.1 -5.07053 | gap 1, overlap 2485233 2485244 2485245 AAGGACGGCAAAAAA CGCCGGTG GTTCG CACCG-CA AAAACGAAACGCCCA SeD_A2609 2486481 - 2485429 - | thiamine biosynthesis lipoprotein ApbE TERM 3211 2486014 - 2485998 - G 71 -10.9 -3.28924 | opp_overlap 2485997 2485996 CAGCCCTGTCGATAA CCTGCAA ATG TTGCAGG CCTGTTTTCGCTTTT TERM 3212 2486561 - 2486574 + r 75 -9.5 -3.55815 | opp_overlap 2486561 TAAGGCATGAAAAAA GGGCC CGCA GGCCC TTTAGCAACATCTTT TERM 3213 2486574 - 2486561 - R 100 -9.5 -5.18357 | opp_overlap 2486561 TAAGGCATGAAAAAA GGGCC CGCA GGCCC TTTAGCAACATCTTT SeD_A2610 2487732 - 2486596 - | outer membrane protein C TERM 3214 2488132 - 2488150 + H 100 -11 -5.82388 | TTACCCCTATTTCAA CCGGATGC TTC GCATTCGG TTTTTTTTACCCTTT TERM 3215 2488507 - 2488522 + G 71 -4.6 -4.58786 | GATTCTCCCTTCTAC CGGGAA GCAT TACCCG TTTCTTCTTATTGCT TERM 3216 2490159 - 2490177 + G 71 -5.8 -4.35461 | opp_overlap 2490147, overlap 2490160 2490161 GAACGCTGGGGCGAT CGCGACGC CCT GCGCCGGG TTTTGCTGCTGTTGA SeD_A2613 2488461 - 2491130 + | Hpt domain protein TERM 3217 2491443 - 2491416 - g 74 -9.8 -3.75024 | opp_overlap 2491414 2491419 2491421, overlap 2491419 TCTGACCATGAACAA CAACCCGGCGAT CCTG AGCGCCGTGTTG GATCTTGATATTGAA rcsB 2491147 - 2491797 + | capsular synthesis regulator component B TERM 3218 2491866 - 2491894 + T 85 -6.6 -5.24129 | gap 1, overlap 2491867 GACTCATCTTTTGCA GGCCGGACAGGCG ACGC CGCCA-TCCGGCA TTTTTTATGCCCGCG TERM 3219 2491867 - 2491893 + T 79 -10.1 -3.73995 | gap 1, overlap 2491866 ACTCATCTTTTGCAG GCCGGACAGGCG ACGC CGCCA-TCCGGC ATTTTTTATGCCCGC SeD_A2615 2494646 - 2491899 - | sensor kinase protein RcsC TERM 3220 2494846 - 2494829 - R 100 -14.1 -5.29846 | AACGGCAAAGAAAAA GGGCCGG ATAT CCGGCCC TCGCACAGCAATAAC gyrA 2497499 - 2494863 - | DNA gyrase, A subunit TERM 3221 2496441 - 2496403 - G 71 -7.4 -3.92746 | gap 1 CGCAGTTCAAAAATA GTCCGACGCGTCACCAC TTCACG GCGGTGGCGCA-CGAAC GCTGAAATAATATCT SeD_A2617 2499111 - 2497909 - | mandelate racemase SeD_A2618 2500451 - 2499126 - | putative permease TERM 3222 2501122 - 2501137 + G 72 -2.6 -4.8667 | TACCTCAAACTGGAT CATGAT TTTC ATTATG TTTTTGTGAAATATG TERM 3223 2501302 - 2501292 - g 76 -3.2 -5.07567 | opp_overlap 2501295 2501298, overlap 2501298 GGATATGTTAAAAAA CAAC AAC GTCG AGGGCGTCTGTAATT TERM 3224 2501375 - 2501353 - g 74 -10.6 -3.48395 | overlap 2501354 2501365 2501366 AGCGGTTTTACAGAA CGCGCAAGAA AAC TTCTTGCGCT GAAAGCGTAATAAAG TERM 3225 2501374 - 2501354 - g 81 -14.1 -2.68823 | overlap 2501353 2501365 2501366 GCGGTTTTACAGAAC GCGCAAGAA AAC TTCTTGCGC TGAAAGCGTAATAAA SeD_A2619 2500501 - 2501385 + | putative GntR family regulatory protein ubiG 2501468 - 2502196 + | 3-demethylubiquinone-9 3-O-methyltransferase TERM 3226 2502219 - 2502245 + F 83 -9.4 -4.21607 | opp_overlap 2502219, overlap 2502210 GAATTTTCCTATAAG GGTTGCGTTAGA TCA TCGGGCGCAACC TTTCTCTTCGATGAA TERM 3227 2502276 - 2502286 + F 100 -4 -6.24157 | GAAATCAGCATTCGA TCAA ATT TTGA TTTTTTTTTATGAAT TERM 3228 2504287 - 2504277 - g 70 -6.8 -4.20084 | ACCACCTATGCAAAA GGCA TTT TGCC GATCGACACCTACAA nrdA 2502495 - 2504837 + | ribonucleoside-diphosphate reductase, alpha subunit nrdB 2504950 - 2506080 + | ribonucleoside-diphosphate reductase, beta subunit TERM 3229 2506310 - 2506285 - g 93 -16.3 -2.87931 | TCCAGCCGGGAGAGA TTTTGCCCTGC TGCT GCAGGGCAAAA GGCGATATCGAAATC SeD_A2623 2506080 - 2506334 + | ferredoxin SeD_A2624 2507553 - 2506336 - | quinolone resistence NorA protein SeD_A2625 2507688 - 2508566 + | putative transcriptional regulator TERM 3230 2508625 - 2508658 + T 74 -10.4 -3.25786 | gap 2, overlap 2508619 GCAAACGTTGCGCCA G-GCCGGATGAGG-CG TTTA TGTCCTCATCCGGCGC TTCACTTCTACTATG SeD_A2626 2509752 - 2508682 - | glycerophosphoryl diester phosphodiesterase TERM 3231 2509533 - 2509552 + g 100 -13.6 -3.97947 | opp_overlap 2509522 GGTAGTGGTCATGGA GGACGACC AGAT GGTCGTCC TTTGTCATCACTAAA glpT 2511115 - 2509757 - | glycerol-3-phosphate transporter TERM 3232 2509962 - 2509978 + g 77 -3.5 -5.00616 | opp_overlap 2509948 2509958, overlap 2509964 AGACCGGTAAAGCCC GCCGCCG TAC CCGCCGC TTTTTTCGGCGCCAG TERM 3233 2510851 - 2510836 - G 71 -6 -4.25104 | opp_overlap 2510849 CTGCCGGCAGGAAAA CGCGCG GATT CGAGCG ATCGGACACCGAACC TERM 3234 2511409 - 2511395 - g 86 -7.8 -4.70739 | overlap 2511386 GAAAAACAATGAAAA CTCGCG ACT CGCAAG CAAGTGACGTGATTA TERM 3235 2511465 - 2511479 + G 70 -9.2 -3.7456 | opp_overlap 2511443 AGGGATCGCCCGCGA CTGCGC GCT GCGCGG TTTACGTGTCATTCT TERM 3236 2511827 - 2511814 - g 77 -8.1 -4.07687 | ATCGGTGCGGTAAAA GTGCC GGAT GGCAC CGTGGACCCTTTCCG SeD_A2628 2511388 - 2513016 + | anaerobic glycerol-3-phosphate dehydrogenase subunit A SeD_A2629 2513006 - 2514265 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B SeD_A2630 2514262 - 2515452 + | sn-glycerol-3-phosphate dehydrogenase K-small subunit TERM 3237 2515480 - 2515460 - T 100 -18.3 -4.8622 | opp_overlap 2515460 TCGGCTAAGTAAAAA GCGCCGGAG CCC CTCCGGCGC TATTACCCTACTCAC TERM 3238 2515460 - 2515480 + T 100 -18.3 -3.07043 | opp_overlap 2515460 TCGGCTAAGTAAAAA GCGCCGGAG CCC CTCCGGCGC TATTACCCTACTCAC TERM 3239 2515785 - 2515770 - T 78 -4.7 -5.00467 | opp_overlap 2515765 2515770, overlap 2515765 TGAATAATAATAAAA TCAGG TCTATG CCTGA TTTAATATATCTCCC TERM 3240 2517003 - 2516977 - T 79 -10.8 -3.62644 | opp_overlap 2516974 2516973, overlap 2516978 TTTATAAGTATATAA GGGTGGGAAGGC CAG GCCTTCCCACTA AAAGTTCTATGCCGT TERM 3241 2517002 - 2516978 - T 87 -14.3 -2.77104 | opp_overlap 2516974 2516973, overlap 2516977 TTATAAGTATATAAG GGTGGGAAGGC CAG GCCTTCCCACT AAAAGTTCTATGCCG SeD_A2632 2517186 - 2517010 - | competence damage-inducible protein A TERM 3242 2517173 - 2517155 - G 70 -6.7 -4.10657 | CGATAGGCGCTAAAA CGCATGC GTAAG GCATACG TGCCATCCGGCATTT TERM 3243 2517174 - 2517185 + g 83 -5.8 -4.88067 | TGCGTAAGGCATACG TGCC ATCC GGCA TTTTTCTCAATAACT SeD_A2633 2517995 - 2517192 - | 2-dehydro-3-deoxyglucarate aldolase TERM 3244 2517377 - 2517355 - G 91 -7.6 -5.03314 | overlap 2517356 2517357 TCGACCGCCAAAAAA CCCGCCGC TTTTCCG GCGGCGCG AATACGATAAATACA TERM 3245 2517373 - 2517356 - G 71 -9.8 -3.61506 | overlap 2517355 2517357 CGACCGCCAAAAAAC CCGCCG CTTTTC CGGCGG CGCGAATACGATAAA SeD_A2634 2519310 - 2518021 - | transporter, major facilitator family SeD_A2635 2520571 - 2519366 - | mandelate racemase/muconate lactonizing enzyme family protein SeD_A2636 2521367 - 2520585 - | putative transcriptional regulator SeD_A2637 2522813 - 2521617 - | competence damage-inducible protein A TERM 3246 2522021 - 2522052 + g 74 -7.2 -4.21275 | gap 1, opp_overlap 2522013, overlap 2522046 GACTCAACTGCCTTT CCTGCAGGCGGCGGG CTA TTTGC-GCCGGCAGG TTTTCCGTACCTTCA TERM 3247 2522920 - 2522901 - R 78 -12.8 -2.54344 | overlap 2522900 2522898 GAAAAGGAGGAATAT GGCGCGAC GATT GCCGCGCC GTTAGCATCAAAAGC TERM 3248 2522951 - 2522934 - R 83 -9.1 -4.30576 | opp_overlap 2522920 CCGTTAGCATCAAAA GCTGGCG TTTA CGCCAAC ATAAGGGCCGTCAAC SeD_A2638 2523602 - 2522928 - | putative inner membrane protein TERM 3249 2523669 - 2523659 - H 91 -6.8 -5.52023 | opp_overlap 2523659 AGGATTAACAAAAAA CGCA GTC TGCG TTATCGCTTCCATTT SeD_A2639 2523749 - 2524174 + | hydrolase, nudix family TERM 3250 2524179 - 2524198 + T 76 -9.3 -3.76413 | opp_overlap 2524178 2524175 GGTTATTATAATGAC GACAGCC GCTTCA GGCTGTC TTTACGCTTTTAACA SeD_A2640 2524824 - 2524219 - | aluminum-inducible protein TERM 3251 2524894 - 2524882 - H 76 -7.7 -4.27965 | ACAATTAAAATGAAA TTCCG CGA CGGAA GACCTGGCCAGAAAC TERM 3252 2525633 - 2525615 - g 83 -10.2 -3.95153 | opp_overlap 2525625 2525631, overlap 2525607 GGAACCAGCTACAAA GGTCGCCA CAT TGGCGCCC GGGGCACCGCGATTT SeD_A2641 2525105 - 2526262 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase SeD_A2642 2526265 - 2527248 + | undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase SeD_A2643 2527245 - 2529227 + | bifunctional polymyxin resistance protein ArnA SeD_A2644 2529224 - 2530123 + | polysaccharide deacetylase domain protein TERM 3253 2530316 - 2530306 - g 71 -4.6 -4.59773 | CGTTATTTTGAAAAA CCGA TAG CCGG TTACTGGATAAACAG SeD_A2645 2530120 - 2531766 + | undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyltransferase SeD_A2646 2531763 - 2532098 + | inner membrane protein YfbW SeD_A2647 2532098 - 2532475 + | membrane protein YfbJ SeD_A2648 2532727 - 2532470 - | signal transduction protein PmrD menE 2534192 - 2532825 - | O-succinylbenzoate-CoA ligase menC 2535151 - 2534189 - | o-succinylbenzoic acid (OSB) synthetase TERM 3254 2534570 - 2534549 - G 77 -11.5 -3.57144 | opp_overlap 2534541 2534551 GGTTTCACGGGCAAA GGCGCGGGA ATCA TCCCGCGTC TTACACGGTTCTTCG TERM 3255 2534551 - 2534568 + g 81 -12.7 -3.05066 | opp_overlap 2534549, overlap 2534541 TTTCACGGGCAAAGG CGCGGGA ATCA TCCCGCG TCTTACACGGTTCTT menB 2536008 - 2535151 - | naphthoate synthase SeD_A2652 2536781 - 2536023 - | acyl-CoA thioester hydrolase YfbB TERM 3256 2536463 - 2536481 + g 76 -11.7 -3.08679 | GACCGCCTTCGACCA CCAGGCC GCACA GGCCTGG TATTCCCTGGCAGGC menD 2538448 - 2536778 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 3257 2537768 - 2537788 + g 76 -5.3 -4.82901 | overlap 2537770 2537772 TTCCGCGCTCATACG CCCGGCG ACGACAA CGCCGCG TTTTTGTCGCCAGAA SeD_A2654 2539829 - 2538534 - | menaquinone-specific isochorismate synthase TERM 3258 2538798 - 2538772 - G 71 -5.8 -4.30995 | gap 1 TGTTCTATAAAACAA CGCGCGGGTTC ACGAGG GATCCCG-GCG ACCGCTGCGGTAGGC TERM 3259 2538971 - 2538990 + g 74 -2.1 -5.00846 | opp_overlap 2538971 AGATGTCTTCGACAA CCAGC ATATTTTCTC GCTGG TTTTTATCGTCTTTC TERM 3260 2539867 - 2539851 - R 78 -6.5 -4.56597 | opp_overlap 2539863 2539864 2539866, overlap 2539852 2539863 CCTCCCTGTTAAAAA CCCCACA TTA TACGGGG TACTGCCCTAAAAAA SeD_A2655 2540235 - 2539930 - | protein ElaB TERM 3261 2539988 - 2539998 + g 81 -6.8 -4.72986 | opp_overlap 2539988 GCGCCTACGCCAATA CCCT GCC AGGG TTTTTCATGAACGTA SeD_A2656 2540751 - 2540290 - | protein ElaA rnz 2540812 - 2541729 + | ribonuclease Z SeD_A2658 2541795 - 2542796 + | CheW protein TERM 3262 2542798 - 2542836 + T 77 -11 -3.14132 | opp_overlap 2542802 2542804 GCAAAAGCGCCTGAC GTAACAGGGGATGCCT ACAGTAC AGGCATCCCCTGACGC TTAGTGAGACAAGCC TERM 3263 2542832 - 2542802 - T 100 -18.4 -3.05715 | opp_overlap 2542798, overlap 2542804 AAGCGCCTGACGTAA CAGGGGATGCCTAC AGT ACAGGCATCCCCTG ACGCTTAGTGAGACA TERM 3264 2542830 - 2542804 - T 93 -15.2 -3.08679 | opp_overlap 2542798, overlap 2542802 GCGCCTGACGTAACA GGGGATGCCTAC AGT ACAGGCATCCCC TGACGCTTAGTGAGA SeD_A2659 2544618 - 2542837 - | von Willebrand factor, type A TERM 3265 2543518 - 2543550 + g 86 -3.6 -5.40072 | overlap 2543520 GTCATCGCCGACGCC CAGCGT-AGATAAGGT AAT ACCTT-TCTCACGCTC TTTTTTTACCAGCGC TERM 3266 2543520 - 2543548 + g 71 -6.2 -4.34482 | overlap 2543518 CATCGCCGACGCCCA GCGT-AGATAAGGT AAT ACCTT-TCTCACGC TCTTTTTTTACCAGC SeD_A2660 2544848 - 2544729 - | hypothetical protein SeD_A2661 2544889 - 2545014 + | hypothetical protein TERM 3267 2545431 - 2545415 - T 73 -9.5 -3.29829 | opp_overlap 2545415 2545414, overlap 2545426 CACAGGTTTTCATAA GTTGGAT GCA ATCCAAC ATTTAGAGGCTCAGG TERM 3268 2545466 - 2545483 + T 93 -12.7 -3.66018 | GCTCATCAGCCTCAA CCGCCGA TAAA TCGGCGG TTATTGACATCATCA nuoN 2546964 - 2545507 - | NADH-quinone oxidoreductase, N subunit TERM 3269 2546728 - 2546698 - G 95 -15.4 -3.65351 | CCACGGGTAGGCAAA GGTGCAGGTGGCGA GGC TCGCCAGCAGCACC AGCCCGGTGTAGAGC nuoM 2548500 - 2546971 - | NADH-quinone oxidoreductase, M subunit TERM 3270 2548292 - 2548280 - G 70 -6.9 -4.18802 | ATAGAGATGCCAAAA CGCGG GAT CCACG GCAGGACAAATTCAG nuoL 2550655 - 2548814 - | NADH-quinone oxidoreductase, L subunit TERM 3271 2549076 - 2549110 + g 71 -9.9 -3.53012 | opp_overlap 2549054, overlap 2549069 2549077 CCCAGCAGGCGGCCC GGCGCGCTGTTGGCG ATCGA CGTCACCAGCGTGCG TTTACCCAGCCACAG TERM 3272 2549077 - 2549109 + g 79 -13.4 -2.71712 | overlap 2549069 2549076 CCAGCAGGCGGCCCG GCGCGCTGTTGGCG ATCGA CGTCACCAGCGTGC GTTTACCCAGCCACA nuoK 2550954 - 2550652 - | NADH-quinone oxidoreductase, K subunit nuoJ 2551505 - 2550951 - | NADH-quinone oxidoreductase, J subunit nuoI 2552058 - 2551516 - | NADH-quinone oxidoreductase, I subunit nuoH 2553050 - 2552073 - | NADH-quinone oxidoreductase, H subunit TERM 3273 2552902 - 2552863 - G 76 -12.8 -2.79679 | gap 1, opp_overlap 2552864 AACATCTTGATCATA TCCGCGACCAGCTGGAGCG AGC CGCCCCAGCCAA-CGCGGT TTGGTCCATAACGGT nuoG 2555773 - 2553047 - | NADH-quinone oxidoreductase, G subunit TERM 3274 2554272 - 2554288 + g 74 -2.1 -5.00616 | CTACCGGCGTTAGTG CCGGAGA TAA TCAGCGG TTTTTTCGCGCCGGC TERM 3275 2555595 - 2555609 + g 70 -5.6 -4.46404 | ATCACCAGGCGACCA CGCGTA TCT TCCGCG TTTTGGTATTGCTTC nuoF 2557141 - 2555804 - | NADH oxidoreductase (quinone), f subunit nuoE 2557638 - 2557138 - | NADH-quinone oxidoreductase, E subunit nuoC 2559443 - 2557641 - | NADH-quinone oxidoreductase, C/D subunit TERM 3276 2559163 - 2559152 - G 73 -5.8 -4.37886 | overlap 2559160 2559161 TCAGGTGGTAGAAAA CGGA AAAA TCCG CGGCGGGTAACCCGT TERM 3277 2559184 - 2559160 - G 100 -9.1 -4.89729 | overlap 2559152 2559161 TAGAAAACGGAAAAA TCCGCGGCGGG TAA CCCGTCACGGT GCGTACGCAGGCGTT TERM 3278 2559183 - 2559161 - G 85 -12.6 -3.5221 | overlap 2559152 2559160 AGAAAACGGAAAAAT CCGCGGCGGG TAA CCCGTCACGG TGCGTACGCAGGCGT SeD_A2673 2560192 - 2559530 - | NADH-quinone oxidoreductase, B subunit TERM 3279 2560106 - 2560129 + g 95 -11 -4.57073 | overlap 2560096 GTTAACTTCCTGCTC CAGGGGGTCG GTTA CGATCTCCTG TTTTTGCAGGGGGTA nuoA 2560651 - 2560208 - | NADH-quinone oxidoreductase, A subunit TERM 3280 2560353 - 2560339 - G 89 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCAACCCAGCCGC TERM 3281 2560756 - 2560738 - R 95 -2.4 -6.13503 | overlap 2560739 2560740 GAGGAATAAAAAAAA CCCTACAA TTA CTGTAGAA AATGATAAAAACAGC SeD_A2675 2561198 - 2561046 - | hypothetical protein TERM 3282 2561206 - 2561239 + r 91 -7.4 -5.22039 | gap 1, opp_overlap 2561206 ATGGGCACAAAAAAA GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC TTTTTTACATTTACG TERM 3283 2561239 - 2561206 - R 100 -9.6 -5.61596 | gap 1, opp_overlap 2561206 ATGGGCACAAAAAAA GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC TTTTTTACATTTACG SeD_A2676 2562216 - 2561278 - | HTH-type transcriptional regulator PecT TERM 3284 2562137 - 2562114 - G 71 -11.6 -2.96395 | opp_overlap 2562114 ACTGAGTACGACATA CCGCCGCCGC CGCC GCGGCGAAGG TGTTCAGATCGGCAA SeD_A2677 2563075 - 2562890 - | hypothetical protein TERM 3285 2564138 - 2564150 + H 77 -10.5 -3.42503 | opp_overlap 2564138 GTTTCCTGCGTAAAA CCGCG CGG CGCGG TTGTACATGTTCCCC TERM 3286 2564150 - 2564138 - H 87 -10.5 -4.07568 | opp_overlap 2564138 GTTTCCTGCGTAAAA CCGCG CGG CGCGG TTGTACATGTTCCCC TERM 3287 2564403 - 2564380 - H 100 -14 -3.72453 | opp_overlap 2564380, overlap 2564373 ATCAATAATCTTAAA TTCAGGCTAC TTCG GTAGCCTGAA TTGCATCTTCATCCG TERM 3288 2564380 - 2564403 + H 86 -14 -3.20348 | opp_overlap 2564380 2564373 ATCAATAATCTTAAA TTCAGGCTAC TTCG GTAGCCTGAA TTGCATCTTCATCCG TERM 3289 2564782 - 2564761 - g 80 -4.3 -5.10497 | opp_overlap 2564765, overlap 2564748 AAGCGATCGAAAAAA TCGCCCAGC AAAA GCTGGTTGA TATGGCGCCGGATGA SeD_A2680 2564466 - 2565065 + | 5'-nucleotidase YfbR TERM 3290 2565114 - 2565141 + T 93 -10.6 -4.39166 | gap 1 ACCGTTCTTCCCGTA GGCCTGATAAGCG CAA CGCC-ATCAGGCC TTTTCCTGTCTGGGG SeD_A2681 2566983 - 2565157 - | citrate transporter TERM 3291 2565322 - 2565307 - G 86 -11.8 -3.86194 | overlap 2565294 AACCGGCGTCATAAA GGCGGC GGAT GCCGCC ATCGCCACCGCCATC TERM 3292 2565898 - 2565912 + g 77 -11.4 -3.53012 | CAGCGATCCTTCCAG CGCGAC GCC GTCGCG TTTCAGGCCGACCAC TERM 3293 2566370 - 2566380 + g 77 -8.2 -4.13767 | CCTGCCTGTTGTCCG GGCG CAT CGCC TTTTAGCATGAAGCG TERM 3294 2567053 - 2567029 - R 84 -10.8 -3.86346 | gap 1, opp_overlap 2567030, overlap 2567032 CGATTCTGCCATAAA TAT-GCCCCGC CAAA GCGGGGCGATA TCATGATCAGGTCTT TERM 3295 2567049 - 2567032 - R 83 -14.1 -2.70946 | opp_overlap 2567030, overlap 2567029 TTCTGCCATAAATAT GCCCCGC CAAA GCGGGGC GATATCATGATCAGG SeD_A2682 2567719 - 2567060 - | phosphatase YfbT SeD_A2683 2568269 - 2567730 - | YfbU domain protein TERM 3296 2568281 - 2568262 - G 100 -10.8 -5.52384 | opp_overlap 2568262 TGGCGATGAAAAAAA GAAGGCAT TGGT ATGCCTTC TTTTATATGCGTAAT TERM 3297 2568262 - 2568281 + g 95 -10.8 -4.55689 | opp_overlap 2568262 TGGCGATGAAAAAAA GAAGGCAT TGGT ATGCCTTC TTTTATATGCGTAAT SeD_A2684 2568762 - 2568307 - | putative inner membrane protein YfbV TERM 3298 2568628 - 2568649 + g 80 -8.7 -4.07568 | opp_overlap 2568616 2568642, overlap 2568629 AAATCGTATGGCATA GCGCGTCAT ACGA ATGACGCGG TTTTCGACGAAAACG TERM 3299 2568629 - 2568648 + g 76 -12.2 -3.04398 | opp_overlap 2568616 2568642, overlap 2568628 AATCGTATGGCATAG CGCGTCAT ACGA ATGACGCG GTTTTCGACGAAAAC SeD_A2685 2568931 - 2569065 + | hypothetical protein TERM 3300 2569931 - 2569907 - g 70 -2.7 -4.76075 | overlap 2569898 2569908 ATCAGATCAACAAAA TGCTGACCAAA GAG TCCGGTCTGCT GGGTCTGACTGAAGT ackA 2569102 - 2570304 + | acetate kinase TERM 3301 2570308 - 2570335 + F 100 -16.4 -4.37886 | gap 1, overlap 2570310 CTGACTGCCTGATTT CA-CACCGCCAGC CTC GCTGGCGGTGCTG TTTTGTAACCCGTCC TERM 3302 2570310 - 2570332 + F 100 -19.2 -2.8733 | overlap 2570308 GACTGCCTGATTTCA CACCGCCAGC CTC GCTGGCGGTG CTGTTTTGTAACCCG pta 2570381 - 2572525 + | phosphate acetyltransferase TERM 3303 2573305 - 2573272 - g 79 -13.3 -2.70932 | gap 1, overlap 2573277 TCGCCTTTGCAATTA TCATAGCCCCGC-TGA TGG TCAGGCTGGGCTATGA CAGCATTACCACCGT TERM 3304 2573808 - 2573824 + G 74 -7.2 -4.07687 | AGGATGATGATCGCG CCCGCC TTGCT GGTGGG TTTTGCCAAAGGCAT SeD_A2688 2572743 - 2574263 + | C4-dicarboxylate anaerobic carrier protein TERM 3305 2574299 - 2574271 - T 95 -11.8 -4.30416 | gap 1, opp_overlap 2574270 ATCATTAATCCAAAA TGCCGGATGAGCA TCAG CGC-CATCCGGCA ATATCTCCATGATTA SeD_A2689 2575265 - 2574312 - | transketolase domain protein TERM 3306 2574504 - 2574520 + g 84 -5.7 -5.03715 | overlap 2574517 GCTGTGGTTTTCACA CGTGACG ATA CGCCGCG TTTTTTCCGCGTAGT TERM 3307 2574996 - 2574985 - G 71 -5.8 -4.28018 | overlap 2574974 AAGAGCTGATCAAAA CAGC GACG GCTG GCAAAAGCGGTAAAG SeD_A2690 2576088 - 2575258 - | transketolase domain protein TERM 3308 2575450 - 2575464 + g 71 -10 -3.57144 | opp_overlap 2575437, overlap 2575437 CACCGCCAGTAGTCC GGCGAT ATC ATCGCC TTTGACGGTGACGAC TERM 3309 2575743 - 2575769 + g 73 -5.1 -4.58395 | overlap 2575744 2575750 TGCCCTGTCCCAGTG AGC-CGGTCGTGG CGT CCACG-CCGCGCG TTTTTAGCCGATCCG SeD_A2691 2577476 - 2576085 - | ascorbate-specific PTS system enzyme IIC SeD_A2692 2577769 - 2577497 - | phosphotransferase system, lactose/cellobiose-specific IIB subunit TERM 3310 2577651 - 2577625 - G 72 -2.3 -4.91109 | gap 2, overlap 2577627 TGGCCATTACAAAAA GATCGG-CA-GCC CCG GGCGTGGCCGATG AAAGATCGGAGTGTT SeD_A2694 2578293 - 2577850 - | PTS family enzyme IIA, mannitol-specific, cryptic SeD_A2693 2578292 - 2578465 + | hypothetical protein TERM 3311 2579511 - 2579540 + G 83 -10.1 -4.12532 | gap 1, opp_overlap 2579511 GTTAAATCAGGGAAA CTGGA-GCGATCGA AAA TCCATCGCCTCCAG TTTATGTATGCGGGA TERM 3312 2579540 - 2579511 - g 74 -10.1 -3.74224 | gap 1, opp_overlap 2579511 GTTAAATCAGGGAAA CTGGA-GCGATCGA AAA TCCATCGCCTCCAG TTTATGTATGCGGGA SeD_A2695 2578546 - 2579565 + | regulatory protein, LacI SeD_A2696 2580125 - 2579571 - | nudix hydrolase 3 SeD_A2697 2580733 - 2580182 - | phosphodiesterase YfcE SeD_A2698 2581433 - 2580789 - | glutathione S-transferase domain protein TERM 3313 2581126 - 2581139 + g 100 -9.5 -4.88736 | CACGCCTGAATCTGT CGCGC GCGG GCGCG TTTTTGTAAATCGTG TERM 3314 2581408 - 2581395 - G 74 -2.3 -4.99035 | GTAGGGAGAGAAAAA GTTCG CATC CGACC ACAGCACAATAACAG SeD_A2699 2581576 - 2582223 + | glutathione S-transferase, N- domain TERM 3315 2582283 - 2582273 - f 73 -2.4 -5.14477 | TATACACGGAAAAAA CCTG CGT CCGG CACCCTTATTCGTAT TERM 3316 2583054 - 2583084 + G 83 -12.4 -3.68222 | overlap 2583055 GAGCAGTTTGCTCAT GCGCTGGGTCGCGC GCT GCGCCGCCCGGCGA TTATTCGCATTCCGG TERM 3317 2583055 - 2583083 + G 86 -15.9 -2.80612 | overlap 2583054 AGCAGTTTGCTCATG CGCTGGGTCGCGC GCT GCGCCGCCCGGCG ATTATTCGCATTCCG TERM 3318 2583183 - 2583171 - g 80 -9.1 -4.07568 | CGGGCGCTGCCAAAA CGGCT TGA AGCCG CCGGATTCGCATTTC SeD_A2700 2582349 - 2583242 + | hypothetical protein hisP 2584070 - 2583294 - | histidine ABC transporter, ATP-binding protein hisM 2584788 - 2584081 - | histidine ABC transporter, permease protein HisM hisQ 2585471 - 2584785 - | histidine ABC transporter, permease protein HisQ SeD_A2704 2586436 - 2585654 - | putative lysine-arginine-ornithine-binding periplasmic protein TERM 3319 2586543 - 2586504 - R 71 -10 -3.14564 | opp_overlap 2586505 2586507, overlap 2586507 2586516 CTATCGTGCCATTAA TCAGGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCCGGT TTATTTTGCATAAAA TERM 3320 2586505 - 2586542 + r 80 -6.9 -4.68908 | opp_overlap 2586504 2586507 2586516, overlap 2586507 TATCGTGCCATTAAT CAGGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCCGG TTTATTTTGCATAAA TERM 3321 2586540 - 2586507 - R 87 -14.7 -2.77899 | opp_overlap 2586505 2586507, overlap 2586504 2586516 TCGTGCCATTAATCA GGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCC GGTTTATTTTGCATA TERM 3322 2586636 - 2586613 - R 100 -10.4 -4.7497 | opp_overlap 2586598 2586632 CTTATGCACCAAAAA GGTGCAAAAC ATCT ATTTTGCACC GTGATAGTTCCCCAG SeD_A2705 2587456 - 2586674 - | lysine-arginine-ornithine-binding periplasmic protein TERM 3323 2587349 - 2587316 - G 81 -8.1 -4.29929 | opp_overlap 2587318 ATCAAAGCCAATAAA CTCGCCTTTGGCATC TTTT GATGAGAAAGGCGCG TAGGTGGTATCTGTT SeD_A2706 2587534 - 2587656 + | hypothetical protein TERM 3324 2587712 - 2587694 - T 76 -7.4 -4.37092 | ATCGCGGTTACAAAA TTGTCCTG AAA CAGGGCAA CAGGGACAATAATGC SeD_A2707 2588314 - 2587745 - | phenylacrylic acid decarboxylase TERM 3325 2587874 - 2587863 - G 91 -7.2 -4.98436 | GGAAGATGATAAAAA GCCG GAAC CGGC GGCATAATCACCGCG SeD_A2708 2589747 - 2588341 - | putative amino acid transporter TERM 3326 2589020 - 2588994 - G 77 -3.7 -5.07652 | opp_overlap 2589006, overlap 2588989 GGCCGTAAAACAAAA TGATTCTGAGA CCGAT CCCCAGGATCA CTTTCGGTAAAATAA TERM 3327 2589805 - 2589779 - R 79 -11.4 -3.38046 | opp_overlap 2589781, overlap 2589777 2589780 2589794 TCGTGAGGTCAAAGA TGCCGCCGCGAC ATA GCCGCGGCGGTT ATGCGTTAACGCGTA TERM 3328 2589804 - 2589780 - R 86 -14.9 -2.62613 | opp_overlap 2589781, overlap 2589779 2589777 2589794 CGTGAGGTCAAAGAT GCCGCCGCGAC ATA GCCGCGGCGGT TATGCGTTAACGCGT TERM 3329 2589781 - 2589803 + r 100 -16.2 -3.41878 | opp_overlap 2589780 2589779 2589777 2589794 GTGAGGTCAAAGATG CCGCCGCGAC ATA GCCGCGGCGG TTATGCGTTAACGCG SeD_A2709 2590914 - 2589811 - | amino acid racemase TERM 3330 2589933 - 2589950 + g 74 -8.4 -3.9712 | AATCTTCAATATCCA CCAGCG TATGAT CGCTGG TTTGTCCTAAGATAG TERM 3331 2590097 - 2590113 + g 71 -7.9 -3.94853 | overlap 2590102 2590107 TCGACGCCCAGCTCC CCGACCG GGA CGGTAGG TTTACTGTTCAGTTC TERM 3332 2590371 - 2590329 - G 80 -10.5 -3.85817 | gap 1, overlap 2590347 AGTTTCCCGCAGAAA GCCGCCGGACAGGAATACCG CTGT CAGC-TTCCAGCCGGGCGGC CAGCGCCAGAAAATC SeD_A2710 2592337 - 2590916 - | putative amino acid transporter SeD_A2711 2593825 - 2592428 - | diaminopimelate decarboxylase TERM 3333 2594950 - 2594939 - g 71 -7.2 -3.99494 | opp_overlap 2594938, overlap 2594933 TTAATTCAACAAGAA CGCC TGCG GGCG GATCTTTTTTATCGG SeD_A2712 2594036 - 2595463 + | putative regulatory protein purF 2597016 - 2595499 - | amidophosphoribosyltransferase cvpA 2597542 - 2597054 - | CvpA protein TERM 3334 2597670 - 2597645 - R 100 -9.8 -5.27938 | ACGCGTAAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCACACTTTTTATCT SeD_A2715 2598527 - 2597853 - | DedD protein folC 2599785 - 2598517 - | tetrahydrofolate synthase/dihydrofolate synthase TERM 3335 2599761 - 2599737 - G 70 -5.5 -4.38927 | TTTCCAGATAAGAAA GCCACGAGGCC AGG GGCGACGCAGC TTGAGGTATAGATTT TERM 3336 2599847 - 2599815 - R 100 -17.1 -3.06515 | opp_overlap 2599820, overlap 2599820 CTTTACGGTGAAAAG CAAAAGGGCAGAGCC TGC GGCCCTGCCCTTTTC AGTTATCAGGCCTCA TERM 3337 2599820 - 2599842 + r 100 -14.8 -4.3208 | opp_overlap 2599815 2599820 CGGTGAAAAGCAAAA GGGCAGAGCC TGC GGCCCTGCCC TTTTCAGTTATCAGG TERM 3338 2599842 - 2599820 - R 100 -17 -4.67038 | opp_overlap 2599820, overlap 2599815 CGGTGAAAAGCAAAA GGGCAGAGCC TGC GGCCCTGCCC TTTTCAGTTATCAGG accD 2600767 - 2599853 - | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 3339 2600905 - 2600893 - R 77 -3.3 -5.24531 | opp_overlap 2600893 ACTTTGGATAAAAAA GTGGT CGA ACCGC TGAGTTACTTTCTAT SeD_A2718 2601576 - 2600917 - | membrane protein, DedA family truA 2602437 - 2601625 - | tRNA pseudouridine synthase A SeD_A2720 2603450 - 2602437 - | aspartate-semialdehyde dehydrogenase family protein TERM 3340 2603505 - 2603476 - R 86 -11.5 -3.80279 | gap 1, opp_overlap 2603476, overlap 2603469 TCCAGAAATACATAA GCGTCCCTGTCGCA TTA TTCGACAGGGA-GC ATTAAGAAGACATTA pdxB 2604654 - 2603518 - | erythronate-4-phosphate dehydrogenase TERM 3341 2604975 - 2604952 - g 90 -5.9 -5.24129 | overlap 2604956 TCTGGGGATAAAAAA TGACGCGCC GCTACT GTCGCGCCA CTTCCCCGCCGCTGA TERM 3342 2605718 - 2605739 + G 70 -5.1 -4.45517 | GGCCTGTTGTTTATC GCGCTAATA ATTG TACTGGCGC TTTTCTGGCTGGTTT SeD_A2722 2604758 - 2605759 + | protein div TERM 3343 2605913 - 2605901 - f 71 -10.5 -2.75819 | overlap 2605900 GAGATATCCTGAAAC GCGGC GTA GCCGC CGAGCGCCGTACCGC TERM 3344 2605926 - 2605947 + F 95 -14.5 -3.54424 | CGCCGAGCGCCGTAC CGCGTACCT GTGC AGGTACGCG TTTCACAACCTCCAC TERM 3345 2606467 - 2606431 - f 74 -10.7 -3.22298 | GCTATGGATCAGCAA GCCCAACGGCGCACCGG CCG CCAGCGCGCCGTAAATC GCCATCCCGTTCCAC SeD_A2724 2606933 - 2607049 + | hypothetical protein SeD_A2726 2607488 - 2607114 - | putative cytoplasmic protein TERM 3346 2607512 - 2607527 + H 70 -4.8 -4.40561 | overlap 2607509 TTCCTTTCCCCTGAT GAAATA AAAA TATTTC TTCTTTTTCGCGAAA TERM 3347 2607593 - 2607581 - H 78 -6.3 -4.70659 | opp_overlap 2607581 2607570 TCTCAGAGTGAAAAA GAAAG TAA CTTTC TTTTTCTCGCGCTAA TERM 3348 2607581 - 2607593 + H 80 -6.3 -4.84359 | opp_overlap 2607581, overlap 2607570 TCTCAGAGTGAAAAA GAAAG TAA CTTTC TTTTTCTCGCGCTAA TERM 3349 2607637 - 2607624 - H 72 -5.3 -4.62069 | TTTTTACCTTAAAAA TATCG GTGC CGATA ACACATCTTCTTAGG TERM 3350 2607685 - 2607674 - H 78 -5.8 -4.90013 | GAATGGAACCAAAAA GCCA AGAC TGGC ATCGTGCAGATATTA SeD_A2728 2608078 - 2608446 + | putative cytoplasmic protein TERM 3351 2608808 - 2608770 - g 76 -5.3 -4.82901 | gap 1, opp_overlap 2608802, overlap 2608746 CTCGGCGGAGAAAAA GTGGATGTTCTGTTGGCT ACAG AGTCAAC-GCCCATCCAC CTGGAAGTTTATACC SeD_A2729 2608446 - 2608964 + | putative periplasmic protein SeD_A2730 2609642 - 2609031 - | putative inner membrane protein TERM 3352 2609750 - 2609731 - R 100 -13.6 -5.26875 | opp_overlap 2609731 CCCTGAATGAAAAAA CAGGTCGC ATTA GCGACCTG TTTCATTATTGATAC TERM 3353 2609731 - 2609750 + r 100 -13.6 -4.09805 | opp_overlap 2609731 CCCTGAATGAAAAAA CAGGTCGC ATTA GCGACCTG TTTCATTATTGATAC SeD_A2731 2610999 - 2609785 - | 3-oxoacyl-[acyl-carrier-protein] synthase 1 TERM 3354 2611263 - 2611279 + G 74 -2.1 -5.06414 | TAATGACAATGGACT CGAAGAG ACA CGCTACG TTTTTCTTGGCGGCA TERM 3355 2612967 - 2612951 - g 72 -3.5 -4.78237 | opp_overlap 2612958 TAGCCGATAACAAAA CGTCGGC GGC GCCTGCG CCTGTGTATCCGGGT SeD_A2732 2611159 - 2613159 + | protein YfcK TERM 3356 2613201 - 2613174 - T 75 -11.2 -3.08798 | opp_overlap 2613167 2613200 ATGGGTCAGTCAATA GCGGAAGGCGGC AAGC GTCGCCTTCCGG CCCACGGCGTTATTG SeD_A2733 2613486 - 2613211 - | YfcL protein SeD_A2734 2614067 - 2613519 - | hypothetical protein SeD_A2735 2614876 - 2614067 - | hypothetical protein TERM 3357 2614391 - 2614367 - G 80 -9.9 -3.94381 | overlap 2614382 2614383 2614385 ACATAAGGTGACAAA CGCCAGAGCGT AAA ACGACCCGGCG GCAGGCCCGAAAAAG mepA 2615700 - 2614876 - | penicillin-insensitive murein endopeptidase TERM 3358 2615677 - 2615690 + g 100 -3.7 -5.77856 | GACAAACCATGCCAG CAGCG CAAT CGCGG TTTTTTTCATTTCTT aroC 2616789 - 2615704 - | chorismate synthase TERM 3359 2617950 - 2617936 - gH 95 -5.6 -5.34655 | overlap 2617938 GAATGAAAAAGAAAA CATCGC TCA GCGAGG AGGACCAGGCGCTGT TERM 3360 2617948 - 2617938 - gH 74 -6.8 -4.26857 | overlap 2617936 ATGAAAAAGAAAACA TCGC TCA GCGA GGAGGACCAGGCGCT SeD_A2739 2617923 - 2618474 + | Smr domain protein SeD_A2740 2618437 - 2618577 + | hypothetical protein sixA 2619059 - 2618574 - | phosphohistidine phosphatase SixA fadJ 2621415 - 2619268 - | fatty oxidation complex, alpha subunit FadJ TERM 3361 2619618 - 2619630 + g 93 -4.8 -5.46698 | opp_overlap 2619618 TAAGCTTATAAATAG CAGG GTCAA CCTG TTTTTTGCTTTTACG TERM 3362 2619964 - 2619978 + g 91 -7.8 -5.01732 | ATCACTGACGACTAT CGGGGT TTT ACCCTG TTTTTTCGCCAGCTT TERM 3363 2620496 - 2620524 + g 80 -4.3 -5.05782 | overlap 2620499 CCCACGCTGTTCAGC GGGCCGGGCGGCG CAT CGCTACCGGGATC TTTTTTCACCTCGGT TERM 3364 2620569 - 2620554 - G 80 -5.4 -4.87803 | gap 1, overlap 2620556 TACTGGCAAAGAAAA CAG-CGC GCA GCGCCTG CGATTGAGGCGTCAT TERM 3365 2620566 - 2620556 - G 74 -8.2 -4.05678 | overlap 2620554 CTGGCAAAGAAAACA GCGC GCA GCGC CTGCGATTGAGGCGT TERM 3366 2620678 - 2620697 + g 76 -3.4 -5.08169 | overlap 2620673 2620695 AATGATCCGCTCCGT CGCCGGAT AATT ACCCTGCG TTTTTTGCGCTGTCT fadI 2622725 - 2621415 - | acetyl-CoA C-acyltransferase FadI TERM 3367 2621895 - 2621882 - G 76 -9.5 -3.84406 | opp_overlap 2621891 CGGTCATCATAATAA CGGCG GCAG CGCCG TCGGTCAGCGGTGTA TERM 3368 2622893 - 2622857 - H 100 -9.4 -5.66684 | overlap 2622862 GAAGCGACAAAAAAA GAAAACGCCTCCGCCA GATGA TGACGGAGGCGTCGTG AATGAACGGATTAAC TERM 3369 2622888 - 2622862 - H 100 -15.9 -5.61277 | overlap 2622857 GACAAAAAAAGAAAA CGCCTCCGCCA GATGA TGACGGAGGCG TCGTGAATGAACGGA TERM 3370 2624088 - 2624104 + G 70 -6.5 -4.0896 | GATGCGGTATACGCG CGTGCGA AAA TCGAACG TTTTGCGGGCGATTT TERM 3371 2624160 - 2624145 - g 72 -11.8 -2.68823 | overlap 2624144 GTCGCGGCACAGAAT CCGGCG CTGG CGCCGG TCGCGGGTCAGATTC SeD_A2745 2623560 - 2624867 + | long-chain fatty acid transport protein TERM 3372 2624886 - 2624916 + T 86 -11.3 -3.78351 | opp_overlap 2624892, overlap 2624892 CTTTCTGAAACGGAT CAAAAAGGTGAGC ATTGC GCTCACCTTTTTA TTTACTGCCGTTTAT TERM 3373 2624892 - 2624910 + T 100 -10.3 -5.33405 | opp_overlap 2624892, overlap 2624886 GAAACGGATCAAAAA GGTGAGC ATTGC GCTCACC TTTTTATTTACTGCC TERM 3374 2624910 - 2624892 - T 100 -11 -4.78764 | opp_overlap 2624886 2624892 GAAACGGATCAAAAA GGTGAGCA TTG CGCTCACC TTTTTATTTACTGCC SeD_A2746 2625683 - 2624928 - | lipoprotein, VacJ family TERM 3375 2624957 - 2624979 + g 71 -6.3 -4.2679 | gap 1 TCTCTTTGAGTTCGT CCTGAATCGC CTGC GCG-TTCGGG TTTTCCTGCGGCTTG SeD_A2747 2625972 - 2626913 + | inner membrane protein YfdC TERM 3376 2626981 - 2626969 - f 81 -3.3 -5.4505 | CCGGCGAATAAAAAA CGCTA TAC TGGCG CCGCGTTGTCCCCTT TERM 3377 2627825 - 2627844 + G 95 -2.8 -5.8901 | TTGTCGAAATCGAAG GGATGGGA CATG TGCCATTC TTTTTTATTTTATGT SeD_A2749 2627740 - 2627865 + | hypothetical protein TERM 3378 2627974 - 2627941 - f 89 -5.4 -5.75342 | CTCCCTGAAAAAAAA TGCAAAGCCTTGTA AGACGA TGCAAAGCTTTACA TGTCCCGTTTTTATT TERM 3379 2628039 - 2628019 - f 79 -11.3 -3.40565 | opp_overlap 2628019 AATCAGCAATACCAA TTGATCGAT AAC ATCGATCAA TATATTAAAACTCAA TERM 3380 2628019 - 2628039 + F 75 -11.3 -3.07895 | opp_overlap 2628019 AATCAGCAATACCAA TTGATCGAT AAC ATCGATCAA TATATTAAAACTCAA TERM 3381 2628072 - 2628050 - f 70 -5 -4.43815 | overlap 2628042 2628051 2628066 ATCAATATATTAAAA CTCAATAGTT AAA AACTATTAAA AATACAATTATTGAT SeD_A2750 2628156 - 2628545 + | bactoprenol-linked glucose transferase TERM 3382 2630368 - 2630358 - g 71 -4.6 -4.61284 | opp_overlap 2630366 ATAAAAAAAATTAAA GAGG CAT CCCC TGACTCAAGGATTAT SeD_A2751 2628786 - 2630708 + | acyltransferase family protein TERM 3383 2630805 - 2630782 - T 81 -12.4 -3.29471 | CTGCCACTATATTAA CGGTGATCGC TCAG GCGGTCACCG AACTCGATAATAAAG TERM 3384 2632185 - 2632154 - T 84 -8.7 -4.72986 | overlap 2632156 TACGTTCAGCAAAAA GTCGTCATCGGCC GGTTAT GACCGATGACATC CTGATGTGGTCTAGA SeD_A2753 2633134 - 2632196 - | protease 7 SeD_A2754 2634649 - 2633402 - | phosphoglycerate transport system transcriptional regulatory protein pgtA TERM 3385 2634318 - 2634331 + g 73 -5.2 -4.57073 | AATATCAACAGCTTG CCCG GATCGA CGGG TTTTTGCAGAAAATC SeD_A2755 2636645 - 2634639 - | phosphoglycerate transport system sensor protein PgtB TERM 3386 2635732 - 2635763 + g 78 -6.5 -4.56597 | gap 1, opp_overlap 2635719 AAGCGCCCTAGCGTA GCCTCTCTGG-CGC GGCTG GCGTCCAGTAAGGC TTTTTGCGCCGCAAC SeD_A2758 2638139 - 2637879 - | hypothetical protein TERM 3387 2638101 - 2638091 - G 71 -4.6 -4.54821 | ATGCTAACGATAAAA CGGC CAT GCCA ATAATTAAAGTTTCA TERM 3388 2638775 - 2638797 + G 74 -7.6 -4.1964 | overlap 2638766 GTTGGCGGCGGGATC GTCGCGCCTA TCG TCGGTGCGGC TTTTGCGATATTGGG SeD_A2759 2638271 - 2639662 + | phosphoglycerate transport: transporter TERM 3389 2639689 - 2639707 + T 93 -16 -3.11072 | opp_overlap 2639689, overlap 2639699 TCCCGAGGAACAGAA GCGCCGAC ATT GTCGGCGC TATCTATTCGCTGAC TERM 3390 2639707 - 2639689 - T 100 -16 -3.71284 | opp_overlap 2639689 2639699 TCCCGAGGAACAGAA GCGCCGAC ATT GTCGGCGC TATCTATTCGCTGAC SeD_A2760 2640179 - 2639937 - | hypothetical protein SeD_A2761 2640452 - 2640339 - | hypothetical protein TERM 3391 2641620 - 2641641 + H 74 -7.3 -4.24002 | opp_overlap 2641625, overlap 2641625 GTCACTCTACATCTG AAAAAGGCC GCAA GGCCTTTTA TTTTGGCATTTCGCA TERM 3392 2641625 - 2641636 + H 87 -7.2 -5.10163 | opp_overlap 2641625, overlap 2641620 TCTACATCTGAAAAA GGCC GCAA GGCC TTTTATTTTGGCATT TERM 3393 2641636 - 2641625 - H 80 -7.2 -4.64766 | opp_overlap 2641620 2641625 TCTACATCTGAAAAA GGCC GCAA GGCC TTTTATTTTGGCATT TERM 3394 2641708 - 2641725 + H 82 -5.5 -5.24989 | opp_overlap 2641707 2641708 GCTTTTAGCGATAAG TCTCCTG TTTA CAGGCGA TTTTTTACTGTGTCG SeD_A2763 2641735 - 2641857 + | hypothetical protein TERM 3395 2642110 - 2642139 + T 86 -9.3 -4.4767 | opp_overlap 2642115, overlap 2642115 AAGTACAATGCAAAG AAAAACAGGAGCC ATGG GGCTCCTGTTTGC TTTTCTACTCCGTGC TERM 3396 2642134 - 2642115 - T 100 -13.6 -5.33026 | opp_overlap 2642110 2642115 CAATGCAAAGAAAAA CAGGAGCC ATGG GGCTCCTG TTTGCTTTTCTACTC TERM 3397 2642115 - 2642134 + T 100 -13.6 -4.28487 | opp_overlap 2642115, overlap 2642110 CAATGCAAAGAAAAA CAGGAGCC ATGG GGCTCCTG TTTGCTTTTCTACTC SeD_A2764 2643382 - 2642144 - | aminotransferase, classes I and II superfamily TERM 3398 2643163 - 2643150 - G 71 -9.5 -3.53091 | overlap 2643136 ATCGCGCGGCGTAAA CGCGG TATG CCGCG GGACGTGGAATAACC TERM 3399 2643980 - 2643996 + r 93 -13.7 -3.57144 | opp_overlap 2643980 AGGCAATGAAAAAAA CCGCGTG AGG CACGCGG TTTGAGACTGACAAG TERM 3400 2643996 - 2643980 - R 100 -13.7 -5.64006 | opp_overlap 2643980 AGGCAATGAAAAAAA CCGCGTG AGG CACGCGG TTTGAGACTGACAAG TERM 3401 2644038 - 2644085 + r 82 -12.9 -2.91593 | gap 1, opp_overlap 2644024 2644083, overlap 2644039 TTGCCTGATGACGCT GCGCTTATCAGGCCTACAGATG ACACA CTTTTGTAGGCCGGATAAG-GC GTTTATGCCGCCATC TERM 3402 2644039 - 2644086 + r 95 -12.9 -3.86524 | gap 1, opp_overlap 2644024 2644083, overlap 2644038 TGCCTGATGACGCTG CG-CTTATCAGGCCTACAGATG ACACA CTTTTGTAGGCCGGATAAGGCG TTTATGCCGCCATCT glk 2645070 - 2644105 - | glucokinase TERM 3403 2645025 - 2644975 - G 76 -11.8 -3.03243 | opp_overlap 2644960, overlap 2644965 2645024 ATCCAGGCCGGAATA CGTTTTGGCCTGCGAGATTTCTCC ACT GGCGATATCACACAGGGCAAGACG CGCATTCGTGCCGCC TERM 3404 2646226 - 2646198 - g 71 -9.6 -3.53444 | gap 1, opp_overlap 2646206 TTAGCCGTCGTCAAA CTCGCCG-CGC TGGTCATC GCGGCGGCGAG CGGCTTTCGCGGCGG SeD_A2766 2645274 - 2646509 + | Cl- channel, voltage-gated family protein TERM 3405 2646747 - 2646802 + F 72 -9.1 -3.61398 | overlap 2646750 AGTTCCAGCTCGCGA TGTC-GTTATACCGCTGGGCCGCGCCG TGAA TGGCGCGCTCTA-CGGTATAGCCGTCA TTGTTGAGCAGCAGG TERM 3406 2647019 - 2646987 - f 86 -13.4 -3.40403 | overlap 2647005 2647009 GCGGCTGTACCACAA CTTCCGCGCCGTCA GGAAG CGACAGCGCGGCAG CGCCAAAGGCGGCGG TERM 3407 2647826 - 2647809 - f 71 -3.4 -4.85599 | opp_overlap 2647821, overlap 2647810 CTCATGCGATAAAAA TGACGA AAATCG CCGTCA CCGAGGGTATGGTGC SeD_A2769 2648249 - 2648365 + | hypothetical protein SeD_A2770 2648362 - 2649360 + | oxidoreductase, aldo/keto reductase family SeD_A2771 2649474 - 2649800 + | hypothetical protein TERM 3408 2649846 - 2649817 - T 72 -9.4 -3.61398 | opp_overlap 2649814 2649812 2649817 2649818, overlap 2649819 CCTCCTGCTGAATAA CA-GCCCGATGACG CCCA CG-CATCGGGCCTG CTATCTTTCTGTCTT TERM 3409 2649843 - 2649819 - T 85 -12.2 -3.38812 | gap 1, opp_overlap 2649818 2649817 2649814 2649812, overlap 2649817 TCCTGCTGAATAACA GCCCGATGACG CCCA CG-CATCGGGC CTGCTATCTTTCTGT SeD_A2772 2651039 - 2649861 - | manganese transport protein MntH TERM 3410 2650335 - 2650323 - G 86 -10.5 -4.19735 | GCCGCTAAAATGAAA CGCCG CCG CGGCG GTCGCCATCATTGCC TERM 3411 2650630 - 2650619 - G 75 -3.6 -4.83615 | CAGCGGCGACAAAAA GCAG TAAA CCGC CGATGACTTTTTCAA TERM 3412 2651118 - 2651133 + H 71 -7.6 -3.85082 | opp_overlap 2651118 CTTTTGCCTCAAAAA CATAGC CTTT GCTATG TTTCATGCTATGTTT TERM 3413 2651133 - 2651118 - H 82 -7.6 -4.56597 | opp_overlap 2651118 CTTTTGCCTCAAAAA CATAGC CTTT GCTATG TTTCATGCTATGTTT TERM 3414 2652038 - 2652059 + G 74 -7.3 -4.12397 | TGTGGTCGCAGCGCT GGTTCTGAA CATG TTCAGCACC TTTATCGTTCTGTCG nupC 2651445 - 2652647 + | nucleoside transporter NupC TERM 3415 2652668 - 2652685 + T 100 -12.7 -5.61596 | opp_overlap 2652668 CGTTTAATGTAGAAA CCGGGGA GCTA TCCCCGG TTTTTTTATGCCACT TERM 3416 2652685 - 2652668 - T 95 -12.7 -3.97368 | opp_overlap 2652668 CGTTTAATGTAGAAA CCGGGGA GCTA TCCCCGG TTTTTTTATGCCACT SeD_A2774 2654889 - 2652700 - | cyclic diguanylate phosphodiesterase domain protein TERM 3417 2652919 - 2652930 + g 74 -7.2 -4.15106 | GATTTTAATGATGTC CGCC TTGA GGCG TTTTAGCCGTTCATA TERM 3418 2653402 - 2653377 - G 70 -5.4 -4.52589 | gap 1, overlap 2653378 2653380 GTTGCGCATACAAAA CCAGCGCGCCG CGCTC CAGCGC-CTGA CGGATTTTCTGCAAC TERM 3419 2655051 - 2655070 + H 76 -9.2 -3.77831 | opp_overlap 2655051 GACAAAAAGCAAAAA CCCCCGCT TTTC AGCGAGGG TTTGAATGTTGGTGG TERM 3420 2655070 - 2655051 - H 100 -11.4 -5.2197 | opp_overlap 2655051 GACAAAAAGCAAAAA CCCCCGCT TTTC AGCGAGGG TTTGAATGTTGGTGG SeD_A2777 2655510 - 2655857 + | hypothetical protein SeD_A2778 2655859 - 2656251 + | hypothetical protein TERM 3421 2656254 - 2656292 + T 95 -14.8 -3.53761 | opp_overlap 2656256 2656263, overlap 2656256 2656259 2656263 TGAGGCGGACTAACA AAGAATAAACGGCAGG CGTCTGC CCTGCCGTTTATTCTG TTTCAGCGGGCGTTA TERM 3422 2656256 - 2656290 + T 100 -17.4 -3.34517 | opp_overlap 2656256 2656263, overlap 2656254 2656259 2656263 AGGCGGACTAACAAA GAATAAACGGCAGG CGTCTGC CCTGCCGTTTATTC TGTTTCAGCGGGCGT TERM 3423 2656290 - 2656256 - T 100 -17.4 -4.2461 | opp_overlap 2656256 2656254 2656259 2656263, overlap 2656263 AGGCGGACTAACAAA GAATAAACGGCAGG CGTCTGC CCTGCCGTTTATTC TGTTTCAGCGGGCGT TERM 3424 2656259 - 2656287 + T 95 -13.3 -3.81488 | opp_overlap 2656256 2656263, overlap 2656256 2656254 2656263 CGGACTAACAAAGAA TAAACGGCAGG CGTCTGC CCTGCCGTTTA TTCTGTTTCAGCGGG TERM 3425 2656263 - 2656283 + T 90 -9.7 -4.52143 | opp_overlap 2656263 2656256, overlap 2656259 2656256 2656254 CTAACAAAGAATAAA CGGCAGG CGTCTGC CCTGCCG TTTATTCTGTTTCAG TERM 3426 2656283 - 2656263 - T 93 -9.7 -4.67968 | opp_overlap 2656259 2656256 2656254 2656263, overlap 2656256 CTAACAAAGAATAAA CGGCAGG CGTCTGC CCTGCCG TTTATTCTGTTTCAG gltX 2657720 - 2656305 - | glutamyl-tRNA synthetase TERM 3427 2658375 - 2658405 + r 93 -16.3 -2.90763 | opp_overlap 2658375 2658382, overlap 2658382 GCACGACCCACCAAT GTAAAAAGGCGCC CTAAA GGCGCCTTTTTGC TATCTGCGATATGGA TERM 3428 2658405 - 2658375 - R 86 -14.8 -2.51464 | opp_overlap 2658375 2658382, overlap 2658382 GCACGACCCACCAAT GTAAAAAGGCGCCC TAA AGGCGCCTTTTTGC TATCTGCGATATGGA TERM 3429 2658398 - 2658382 - R 100 -11.5 -4.7629 | opp_overlap 2658382 2658375, overlap 2658375 CCACCAATGTAAAAA GGCGCCC TAA AGGCGCC TTTTTGCTATCTGCG TERM 3430 2658382 - 2658398 + r 100 -10.8 -4.84527 | opp_overlap 2658375 2658382, overlap 2658375 CCACCAATGTAAAAA GGCGCC CTAAA GGCGCC TTTTTGCTATCTGCG TERM 3431 2658422 - 2658448 + r 85 -13.8 -3.09834 | opp_overlap 2658422, overlap 2658424 2658435 ATCTGCGATATGGAA GATTCGAACCTG TCG CAGGTTCGGGTC TTGCCTGATGCGCTG TERM 3432 2658424 - 2658446 + r 73 -10.6 -3.10796 | opp_overlap 2658422, overlap 2658422 2658435 CTGCGATATGGAAGA TTCGAACCTG TCG CAGGTTCGGG TCTTGCCTGATGCGC SeD_A2784 2659522 - 2658638 - | HTH-type transcriptional regulator XapR TERM 3433 2659453 - 2659428 - G 75 -11.9 -2.87564 | opp_overlap 2659421, overlap 2659433 GGAGGTTGTGACATA TTTAACCGGGC AGCA GCCCGGCCAAA ATGCAATTCTTCTGC TERM 3434 2659448 - 2659433 - G 76 -11.8 -3.15999 | opp_overlap 2659421, overlap 2659428 TTGTGACATATTTAA CCGGGC AGCA GCCCGG CCAAAATGCAATTCT SeD_A2785 2659732 - 2659574 - | hypothetical protein TERM 3435 2659784 - 2659755 - R 88 -8.6 -4.82901 | overlap 2659757 CCTTGTTCATAAAAA TGGACTGGCGAA CATCCT CTCGCCAGTCAA ATAAAATTAATGTGC TERM 3436 2659782 - 2659757 - R 73 -11.2 -2.6933 | overlap 2659755 TTGTTCATAAAAATG GACTGGCGAA CATCCT CTCGCCAGTC AAATAAAATTAATGT nupG 2661047 - 2659791 - | nucleoside permease NupG TERM 3437 2661087 - 2661073 - R 79 -9.2 -4.03234 | TTGCCGTGAGATAAA GCCCCA ATA CGGGGC CGTAGTCATTGTGTT xapA 2661935 - 2661102 - | xanthosine phosphorylase TERM 3438 2661859 - 2661849 - G 71 -4.6 -4.67048 | GGAGCCTAAAATAAA CGCA ACT CGCG GGGTAAATGCCGGTT SeD_A2788 2662191 - 2662952 + | conserved outer membrane protein TERM 3439 2662982 - 2662957 - T 70 -9.7 -3.06815 | ACCTGTTTTAACACA CTGCCCTGTCA AAAA TGGCAGGGCAA GACCGCACCTCACAC SeD_A2789 2663940 - 2663014 - | OsmT protein TERM 3440 2664145 - 2664164 + G 79 -2.8 -5.28176 | overlap 2664147 TTGAAGGCATTACGA CAGCGG CCATCGCT CTGCTG TTTTTTATGCATGGC TERM 3441 2664364 - 2664380 + G 71 -7.3 -3.93288 | TTTTGCCCGCCACCG TGCAGTC GGC GATTGCA TTTACTTCACTCGCG TERM 3442 2664420 - 2664450 + G 81 -8.3 -4.34402 | gap 1 GTCGCGGCCGCGGTG TGCTCAGC-GTCTG CGTC CAGTCTGCTGGGCA TTTTCCTGTCGCCGC TERM 3443 2664873 - 2664844 - g 86 -4.1 -5.40072 | opp_overlap 2664846 2664847, overlap 2664845 2664846 GCGGTTCGAAAAAAA GCCTGGCCAACGG GATC CCGATGGCCAATA TTCTGTTTCCGACGT TERM 3444 2664871 - 2664846 - g 71 -11.1 -2.89655 | opp_overlap 2664846 2664847, overlap 2664845 2664844 GGTTCGAAAAAAAGC CTGGCCAACGG GATC CCGATGGCCAA TATTCTGTTTCCGAC TERM 3445 2664847 - 2664870 + G 72 -12.4 -2.69057 | opp_overlap 2664846 2664845 2664844, overlap 2664846 GTTCGAAAAAAAGCC TGGCCAACGG GATC CCGATGGCCA ATATTCTGTTTCCGA SeD_A2790 2664030 - 2665028 + | transporter, bile acid/Na+ symporter family SeD_A2791 2665243 - 2665025 - | hypothetical protein ligA 2667260 - 2665245 - | DNA ligase, NAD-dependent TERM 3446 2666348 - 2666325 - G 71 -8.1 -3.87551 | gap 1, opp_overlap 2666346 AGCAGGAAATTTAAA CGC-CACCGC CCAGC GCGGCGCGCG GGCCACAAAGCCCAG TERM 3447 2667284 - 2667300 + r 74 -10.8 -3.17901 | opp_overlap 2667284, overlap 2667297 ATCAATGATAAAAAA CCCCCG ACAGG CGGGGG TTACGTTAAAAATGT TERM 3448 2667300 - 2667284 - R 100 -10.8 -5.38249 | opp_overlap 2667284 2667297 ATCAATGATAAAAAA CCCCCG ACAGG CGGGGG TTACGTTAAAAATGT zipA 2668318 - 2667332 - | cell division protein ZipA TERM 3449 2669038 - 2669062 + G 80 -4.9 -5.06414 | opp_overlap 2669044 TATTCCTGGCATTGG CCAAACCATCG CGC CGGTGCTGTGG TTTTTGTTCAGCGCC SeD_A2794 2668448 - 2669311 + | CysZ protein cysK 2669475 - 2670446 + | cysteine synthase A TERM 3450 2670475 - 2670490 + T 87 -6.8 -5.26316 | opp_overlap 2670475 2670466 AAAACGCGTAAAAAA GCACCT TTTT GGGTGC TTTTTTGTGGCCTGC TERM 3451 2670490 - 2670475 - T 83 -6.1 -5.08011 | opp_overlap 2670475, overlap 2670466 AAAACGCGTAAAAAA GCACC TTTTTG GGTGC TTTTTTGTGGCCTGC SeD_A2796 2670690 - 2670565 - | hypothetical protein ptsH 2670830 - 2671087 + | phosphocarrier protein PtsH ptsI 2671136 - 2672863 + | phosphoenolpyruvate-protein phosphotransferase TERM 3452 2673313 - 2673297 - g 74 -2.2 -5.06414 | opp_overlap 2673308 TTGCTGGAAGAAAAA GCCAAG TCTAC CCTGAC TCCGGTTGTTATCTC crr 2672904 - 2673413 + | PTS system, glucose-specific IIA component TERM 3453 2673433 - 2673450 + T 100 -12.7 -5.83822 | opp_overlap 2673433 TGCCGCAGTGAAGAA TGGCGCC TTTG GGCGCCA TTTTTTTTGCCTGTA TERM 3454 2673450 - 2673433 - T 93 -12.7 -3.67597 | opp_overlap 2673433 TGCCGCAGTGAAGAA TGGCGCC TTTG GGCGCCA TTTTTTTTGCCTGTA SeD_A2800 2673802 - 2673563 - | putative cytoplasmic protein SeD_A2801 2674665 - 2673799 - | pyridoxal kinase TERM 3455 2675224 - 2675268 + G 74 -2 -5.02476 | gap 1, overlap 2675227 CGAAAGACTGCTTTG CGCGCATCTGCTGCCG-GGCG ACAG CGTCGCGGTGGAAGATCCCTG TTTTTTAAGCAGTAT SeD_A2802 2674748 - 2676040 + | GntR-family transcriptional regulator SeD_A2803 2676055 - 2676774 + | glutamine amidotransferase SeD_A2804 2676833 - 2677213 + | putative periplasmic protein SeD_A2805 2677226 - 2677765 + | putative membrane carboxypeptidase cysM 2678807 - 2677896 - | cysteine synthase B TERM 3456 2677968 - 2677954 - G 71 -10 -3.49618 | CCGGTAGACAAGTAA CGATCG CCG CGATCG CAGATAATCGCCACC TERM 3457 2678768 - 2678788 + g 85 -8.9 -4.38273 | GACGTTGTAATTTGA CCAGCGGCG TAT TGCCGATGG TTTGTTCTAATGTAT TERM 3458 2678852 - 2678827 - R 100 -13.3 -5.02074 | gap 1 TCAGCTCGTAAAAAA GCCCGGTATGCG TAG CGC-CACCGGGC GATAACTATACAAAT cysA 2679972 - 2678875 - | sulfate/thiosulfate ABC transporter, ATP-binding protein TERM 3459 2679532 - 2679546 + g 100 -11.4 -4.82901 | GGCAAGCGCACGCGC CAGCGC CAC GCGCTG TTTTTGTCCGCCGGA TERM 3460 2679772 - 2679743 - G 70 -3.4 -4.78848 | TGCTGAAACACAAAA CCGACTTTACGC TCACGC GCGTGCAGGCGG CTAACGTCCGTACCG cysW 2680837 - 2679962 - | sulfate ABC transporter, permease protein CysW cysT 2681670 - 2680837 - | sulfate ABC transporter, permease protein CysT cysP 2682686 - 2681670 - | sulfate/thiosulfate ABC transporter, periplasmic sulfate/thiosulfate-binding protein TERM 3461 2681907 - 2681925 + g 72 -2.3 -4.96848 | overlap 2681908 TTTGGCGGCTTTTTC TGTGCCG TTGGC CTGCACG TTTTTATCTACCCAG TERM 3462 2682833 - 2682806 - R 95 -12.8 -3.84992 | gap 1, overlap 2682793 2682807 AAGGGAATAAGAGAA TC-CCTCCCCACG CGG CGTGAGGAGGAGA CCGGCATCAATCAGA TERM 3463 2682831 - 2682807 - R 87 -14.3 -2.8991 | overlap 2682793 2682806 AGGGAATAAGAGAAT CCCTCCCCACG CGG CGTGAGGAGGA GACCGGCATCAATCA fabG 2683635 - 2682844 - | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 3464 2683770 - 2683753 - R 100 -12.7 -5.48825 | opp_overlap 2683749 TATTAGGTAAAAAAA TCCCCGC GGAG GCGGGGA TGGGCATTTTTATGC SeD_A2812 2684772 - 2683873 - | Dyp-type peroxidase family protein TERM 3465 2684686 - 2684700 + g 74 -7 -4.29845 | GCTGGCCGCGCGCAG GGCGTC CAG GTCGCC TTTTACATTGGCTTC TERM 3466 2684811 - 2684794 - R 86 -11.3 -3.68359 | opp_overlap 2684794 TCCTGAAAATGAGAA TGCCACG CAGT CGTGGCA TTAATGGAGGCTATT TERM 3467 2684794 - 2684811 + r 77 -11.3 -3.15427 | opp_overlap 2684794 TCCTGAAAATGAGAA TGCCACG CAGT CGTGGCA TTAATGGAGGCTATT SeD_A2813 2685442 - 2684867 - | putative outer membrane lipoprotein TERM 3468 2685282 - 2685310 + g 87 -13.8 -3.19389 | GCCGGCTCTTCCAGC GGCGTGGCGGCG GTCAG CGCTCCCACGCC TTGCTCAGTGACTTC SeD_A2814 2685953 - 2685504 - | inner membrane protein YfeZ SeD_A2815 2686365 - 2685940 - | acetyltransferase, GNAT family TERM 3469 2687005 - 2687016 + G 72 -3.6 -4.70879 | opp_overlap 2686994 2687001, overlap 2687001 CCAACCCGAAAGCAG CGGG CGCT TCCG TTTTTGCGCTTTCCA TERM 3470 2687379 - 2687368 - g 71 -5.8 -4.36914 | CGTTTCGCCAGAAAA TCGC TACG GCGA TCGCCAACGGCATCA amiA 2686578 - 2687447 + | N-acetylmuramoyl-L-alanine amidase TERM 3471 2687808 - 2687798 - g 71 -4.6 -4.58395 | opp_overlap 2687798 TTTATTGCCGAAAAA CCGG GCG CCGA TCCGGTGTGGTGGTT hemF 2687450 - 2688349 + | coproporphyrinogen III oxidase, aerobic SeD_A2818 2688511 - 2688699 + | hypothetical protein SeD_A2820 2689982 - 2690104 + | hypothetical protein TERM 3472 2690170 - 2690183 + T 73 -9.5 -3.30124 | CGCTTCCCCGGAGGC GGCGC TGGC GCGCC TTGTCCGGGCTACCA SeD_A2821 2691356 - 2690304 - | HTH-type transcriptional regulator EutR SeD_A2822 2691898 - 2691404 - | putative ethanolamine utilization protein EutK SeD_A2823 2692570 - 2691911 - | putative ethanolamine utilization protein EutL eutC 2693476 - 2692580 - | ethanolamine ammonia-lyase, light chain TERM 3473 2692886 - 2692868 - G 73 -8.8 -3.91144 | opp_overlap 2692872 2692873, overlap 2692871 2692872 GCCATAGCGCACAAA GAACGGCG TGC CGACGTTC AGCCCGGCCTGCTTC eutB 2694856 - 2693495 - | ethanolamine ammonia-lyase, large subunit eutA 2696271 - 2694868 - | ethanolamine utilization protein EutA TERM 3474 2695224 - 2695192 - G 75 -12.8 -2.55351 | gap 1, overlap 2695191 2695200 2695201 CGGGTCGAGATCAAG CTGGAGAAGCGCCTG CCGC CAGGCG-TTCACCAG ATCGGCATCATCCTG TERM 3475 2695936 - 2695924 - G 76 -9.1 -3.96148 | GCTGGCGACCACAAA GTCGC CCA GCGAC TGCGAGAGCGCCATG eutH 2697494 - 2696268 - | ethanolamine utilization protein EutH TERM 3476 2697293 - 2697260 - G 71 -8.1 -3.80174 | gap 1, overlap 2697274 ATACCGGGATAATAA CCGGCCCCAGTACATG CGC CA-GCACCGGCGCCAG CGCGGTCATACCGAC TERM 3477 2697477 - 2697459 - G 74 -7.5 -4.12857 | opp_overlap 2697459 2697458 2697461 AATCAGCATAAAGAA CATCATG ATGTA CATGATG ATTTCGTTAATTCCC SeD_A2828 2698801 - 2697614 - | ethanolamine utilization protein EutG TERM 3478 2698705 - 2698734 + g 70 -7.1 -4.11484 | gap 1 CGAGCGCCCCAAGCC CGCACAGCGTGACC GGC GGT-ACGCTGAACG TTTTCACCCGTTGCA eutJ 2699630 - 2698791 - | ethanolamine utilization protein EutJ TERM 3479 2699526 - 2699565 + g 76 -12.9 -2.70932 | opp_overlap 2699525 2699524 2699528, overlap 2699528 2699554 GCAGGTGCCCAAATC GACGCCCAGCC-ACAGCGG TGTA TCGCTGGCGGC-GGGCGTC TGGTTACACAGGGCC TERM 3480 2699554 - 2699585 + g 91 -10 -4.66953 | opp_overlap 2699528 2699525 2699524, overlap 2699528 2699526 AGCGGTGTATCGCTG GCGGCGGGCGTCTG GTTA CACAGGGCCGCCGC TTTTTGCAGTCTTGG eutE 2701044 - 2699641 - | ethanolamine utilization protein EutE TERM 3481 2700322 - 2700354 + g 71 -6.1 -4.33803 | CTCATCCACCACCAC CGGGGGATTGCCGGC ACC GGCGGCAATCAGGCG TTTATTAGTATGTTT TERM 3482 2700742 - 2700763 + g 83 -7.9 -4.60924 | opp_overlap 2700728 2700730 ACACTCGACGCCCGG CGTGCCGCG CGCC TGCGCCACG TTTTTGGCAAATTTA TERM 3483 2701428 - 2701440 + r 70 -9.1 -3.30124 | overlap 2701407 TTCATGCCGGATGGC GACGC TGC GCGTC TTATCCGGCCTACCA pta 2702803 - 2701787 - | phosphate acetyltransferase TERM 3484 2702021 - 2702047 + g 73 -5.1 -4.56597 | gap 1, overlap 2702024 AATCATCACGTTGGC GCGGCCTTGCAG CGGG CTGTCAGGC-GC TTTTTGCGCGGCGAC SeD_A2834 2703603 - 2702800 - | ethanolamine utilization cobalamin adenosyltransferase TERM 3485 2703281 - 2703299 + g 75 -6.6 -4.37886 | overlap 2703255 2703282 CGAAAGCCGAGGCGC GGGTCGCT TTT GGCGACCA TTTTGTCCGCCGTCA SeD_A2835 2704289 - 2703600 - | ethanolamine utilization protein EutQ TERM 3486 2704084 - 2704101 + g 73 -5.5 -4.57569 | GCGATGATGGCTTCC CGAATGC GCTG GCTTTCG TTTTTACACGCCTGC eutP 2704746 - 2704267 - | ethanolamine utilization protein, EutP SeD_A2837 2705094 - 2704759 - | ethanolamine utilization protein EutS TERM 3487 2705488 - 2705471 - R 100 -12.7 -5.60993 | overlap 2705482 CGGCGCATAAAAAAA GCGCAGG AGAA CCTGCGC CAGAAGAGAGAGTAA SeD_A2838 2707790 - 2705511 - | NADP-dependent malic enzyme TERM 3488 2705945 - 2705925 - G 83 -10.4 -3.92324 | CGGCTCAATACCAAA GCGGCGAA CGGTT TCCGCCGC CATTACGGCGATCTC TERM 3489 2707134 - 2707152 + g 74 -7.4 -4.18018 | AACGCCCTTAGAGTC GCACACCA CGA TGTTGTGC TTTTGCATCCCCAAC tal1 2708062 - 2709012 + | transaldolase TERM 3490 2711013 - 2711003 - g 72 -2.4 -4.87273 | AATATTGTAGAAAAA GCCC GCC GGGT GCTGAACATCAAAGG tkt 2709032 - 2711032 + | transketolase TERM 3491 2711094 - 2711054 - T 79 -12 -3.12449 | opp_overlap 2711054 2711055, overlap 2711048 2711052 2711050 CGTTAGCAACACAGA CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA TTACTTCGTAGACTC TERM 3492 2711054 - 2711094 + T 90 -14.2 -3.40371 | opp_overlap 2711048 2711054 2711052 2711050, overlap 2711055 CGTTAGCAACACAGA CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA TTACTTCGTAGACTC TERM 3493 2711055 - 2711093 + T 100 -17.7 -2.63901 | opp_overlap 2711048 2711054 2711052 2711050, overlap 2711054 GTTAGCAACACAGAC TTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAA ATTACTTCGTAGACT SeD_A2841 2711325 - 2711095 - | hypothetical protein SeD_A2842 2712496 - 2711453 - | putative periplasmic protein TERM 3494 2711704 - 2711718 + g 100 -7 -5.47218 | opp_overlap 2711684 GCCGCAAACGTACGG CGCGCG AGA CGAGCG TTTTTTTGCGTGAAA TERM 3495 2712275 - 2712327 + g 83 -12.6 -3.29471 | gap 2, opp_overlap 2712276, overlap 2712276 GTCGGGCGGCGCCAA ACCGCCGCGATCGATGCGCAGTACCG CAT CGGTAC-GCGCCCCGG-CGCTGCGGC TTAATGTCATCACCA TERM 3496 2712276 - 2712326 + g 85 -16.1 -2.57468 | gap 2, opp_overlap 2712276, overlap 2712275 TCGGGCGGCGCCAAA CCGCCGCGATCGATGCGCAGTACCG CAT CGGTAC-GCGCCCCGG-CGCTGCGG CTTAATGTCATCACC TERM 3497 2712326 - 2712276 - G 100 -16.1 -3.53012 | gap 2, opp_overlap 2712276 2712275 TCGGGCGGCGCCAAA CCGCCGCGATCGATGCGCAGTACCG CAT CGGTAC-GCGCCCCGG-CGCTGCGG CTTAATGTCATCACC TERM 3498 2712602 - 2712613 + r 95 -3 -5.81412 | opp_overlap 2712602 TCTTTTTTGTGTAAA GAAA TATA TTTC TTTTTTTTCAGTCCA SeD_A2843 2713196 - 2712621 - | putative hydrolase YffH TERM 3499 2713575 - 2713551 - g 88 -11.5 -4.21922 | opp_overlap 2713551 2713549 GGATTCAAAATCAAA TTGATGCCGGA TAT CCCAGCATCAA TCTTCTGGTGATAAA SeD_A2844 2713400 - 2714698 + | beta-lactamase TERM 3500 2715007 - 2714995 - T 72 -9.1 -3.5393 | ATCAGGCCCGTTAAA CGTCG ACC CGACG GGAAAATGTTTATCG SeD_A2845 2717108 - 2715147 - | protein AegA TERM 3501 2715487 - 2715477 - G 71 -4.6 -4.65895 | overlap 2715485 CCGCGTACGCAAAAA GCGA ATA CCGC TGGCGCGCCCGTGCG TERM 3502 2715546 - 2715564 + g 74 -4.5 -4.69464 | GTTAAATTCAAAGTT CGCGC CCTCTTCCC GCGCG TTTTTCACCTCTTTT TERM 3503 2717312 - 2717334 + G 100 -6.2 -5.48787 | opp_overlap 2717307 2717306 ACGGTTAAACGCCCG GTCTCGGCCA GTC TGGCTAAGGC TTTTTTCTATATTGT TERM 3504 2718376 - 2718347 - g 75 -5.7 -4.60889 | overlap 2718349 AATCAGGCGCAAAAA CACTTCCAGCAAC TTTT GTTAATGGAAGAG CGCGCGACGATTGCC TERM 3505 2718795 - 2718762 - g 76 -10.9 -3.66874 | opp_overlap 2718753 CCAACGCGAGCGAAA TCGCCGTGAGCTGCG TCAC CGCGCCTGACGGCGA TCATACCGTTTATAT SeD_A2846 2717294 - 2718994 + | nitrate/nitrite sensor protein NarQ TERM 3506 2719046 - 2718999 - f 71 -7.7 -4.01381 | opp_overlap 2719016, overlap 2719006 2719007 AGTTAACGTAAAGAA CG-GCAAATCGCCGGAAGGCCAG ATGT CAGGCTTTCCGGCG-TTGGCACA AAAAGTATGCTGTAA TERM 3507 2719039 - 2719006 - f 93 -12.3 -3.74238 | opp_overlap 2719016, overlap 2718999 2719007 GTAAAGAACGGCAAA TCGCCGGAAGGCCAG ATGT CAGGCTTTCCGGCGT TGGCACAAAAAGTAT TERM 3508 2719038 - 2719007 - f 93 -15.8 -2.8382 | opp_overlap 2719016, overlap 2719006 2718999 TAAAGAACGGCAAAT CGCCGGAAGGCCAG ATGT CAGGCTTTCCGGCG TTGGCACAAAAAGTA acrD 2719179 - 2722292 + | acriflavine resistance protein D TERM 3509 2722328 - 2722358 + F 70 -9.1 -3.34962 | opp_overlap 2722333, overlap 2722333 GAGGTGTCGGGCACA AAAAAGGCGACTT TCGTT GAGTCGCCTTTTC TTATCCCCTATGGGA TERM 3510 2722353 - 2722333 - f 100 -8.3 -5.24129 | opp_overlap 2722333 2722328 GTCGGGCACAAAAAA GGCGACT TTCGTTG AGTCGCC TTTTCTTATCCCCTA TERM 3511 2722333 - 2722353 + F 93 -9 -4.78237 | opp_overlap 2722333, overlap 2722328 GTCGGGCACAAAAAA GGCGACTT TCGTT GAGTCGCC TTTTCTTATCCCCTA TERM 3512 2722380 - 2722392 + F 79 -7.7 -4.41348 | CCTATGGGAGCGCGG TGCCT TCC AGGCA TTTATTTACGAAGCA SeD_A2848 2722866 - 2723222 + | protein YffB TERM 3513 2723358 - 2723374 + G 73 -5.1 -4.59773 | ATTGAGCATATGGAT TTTGGCG ACA CGCAAAA TTTTTGGGCATGGCG TERM 3514 2724196 - 2724208 + G 85 -9.1 -4.38154 | overlap 2724182 TGACGACGGGCGGTA CGTCC GAC GGACG TTTTATCGCCCGTAT dapE 2723226 - 2724353 + | succinyl-diaminopimelate desuccinylase SeD_A2850 2724381 - 2724581 + | hypothetical protein TERM 3515 2724617 - 2724592 - T 82 -11.2 -3.52459 | overlap 2724582 AGTAACCGGATATAA TGCCGGACAG GTATCG CTATCCGGCA TGCTCCCCACCGCCG SeD_A2851 2726626 - 2724608 - | acetyltransferase TERM 3516 2725130 - 2725103 - G 71 -7.7 -3.99324 | overlap 2725122 2725123 CCGTACCAGTACAAA GCCGCAGCGTT GCCAGA AACGCCACAGC TCCGGCGTATAGCCG SeD_A2852 2727505 - 2726642 - | zinc protease TERM 3517 2727623 - 2727602 - R 74 -11.5 -2.90054 | overlap 2727597 GAGGAAAGGATGATA CCGGAGAGC GGTT GCCCCCCGG TCAGAAGCGGAATTA purC 2728349 - 2727636 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3518 2728516 - 2728497 - R 100 -11.4 -5.31275 | opp_overlap 2728497 2728495 TCTTATCAGAAAAAA GGGCCGGA TTAC TCCAGCCC TGTTAAATTACTTGT SeD_A2854 2729558 - 2728524 - | lipoprotein, NlpB/DapX family dapA 2730453 - 2729575 - | dihydrodipicolinate synthase gcvR 2730599 - 2731171 + | glycine cleavage system transcriptional repressor SeD_A2857 2731171 - 2731641 + | putative peroxiredoxin bcp SeD_A2858 2732827 - 2731688 - | glycerate kinase SeD_A2859 2734101 - 2732833 - | gluconate transporter TERM 3519 2732983 - 2732971 - G 71 -4.7 -4.56597 | overlap 2732972 CGTCGCGTGGAAAAA GCTGC CGT GCGGC AGATGGTCCAGCACC TERM 3520 2733146 - 2733126 - G 75 -12.5 -2.64616 | TCGCCATTGACATCA TGGCGCCAG ACA CGGGCGCCA GCAGCCAGGATGGCA TERM 3521 2733434 - 2733408 - G 93 -11.6 -4.40993 | overlap 2733410 GAGAAAGCAGGAAAA TAGCGACCAGCG GCG CGCTAATCGCCA CCAGAAAACCGGGTC TERM 3522 2733432 - 2733410 - G 86 -12 -3.79533 | overlap 2733408 GAAAGCAGGAAAATA GCGACCAGCG GCG CGCTAATCGC CACCAGAAAACCGGG SeD_A2860 2735332 - 2734169 - | transcriptional regulator, CdaR TERM 3523 2735524 - 2735505 - R 100 -9.3 -5.18726 | TTCCGACAATAAAAA TGCCGCA ACACGG TGCGGCA TTAAAAAAAAGAGCG SeD_A2861 2736721 - 2735633 - | permease PerM TERM 3524 2737250 - 2737265 + G 71 -4.6 -4.65895 | TTTGGCGGCAATGTG GTGCTG CACT CGGCGC TTTTTCGCTACGCGG TERM 3525 2737379 - 2737369 - g 83 -8.2 -4.43681 | opp_overlap 2737370, overlap 2737370 GATGGAAGATCAAAA GCGC AGC GCGC CGCTTACCTGGGTGG SeD_A2862 2736908 - 2738371 + | TPR repeat-containing protein YfgC arsC 2738411 - 2738770 + | arsenate reductase TERM 3526 2738779 - 2738794 + T 79 -11.8 -3.12668 | overlap 2738771 CGGTTAACCGTTGAA CGCCGC CGTC GCGGCG TATTACAGTTTCAGA SeD_A2864 2739522 - 2738797 - | DNA replication initiation factor TERM 3527 2739585 - 2739565 - R 100 -18.3 -3.58726 | opp_overlap 2739582 TCCCGTGAGATAGAA CCGGGCAGC ATC GCTGCCCGG CAACCCGTTACTGAT TERM 3528 2739597 - 2739617 + r 100 -14.1 -3.65902 | CCGGCAACCCGTTAC TGATGCGGA GGC TCCGCATCA TTTGCCTCCAGTACC uraA 2740882 - 2739593 - | uracil permease TERM 3529 2740542 - 2740552 + g 74 -2.4 -5.03314 | ATCACATCCAGCCAG CCGG TGC CCGC TTTTTTAACGATGAA TERM 3530 2740615 - 2740605 - G 72 -2.4 -4.84311 | CCGCACATAATAAAA CCGC CCA GCGC CACTTCATAACCCAG TERM 3531 2740928 - 2740956 + r 74 -10.4 -3.13412 | opp_overlap 2740933, overlap 2740933 GTGGTTTTATTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTTA ATTATTTATTCACTT TERM 3532 2740951 - 2740933 - R 100 -11 -5.81412 | opp_overlap 2740933 2740928 TTTATTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTTAATTATTTATT TERM 3533 2740933 - 2740951 + r 93 -10.3 -4.65969 | opp_overlap 2740933, overlap 2740928 TTTATTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTTAATTATTTATT upp 2741596 - 2740970 - | uracil phosphoribosyltransferase TERM 3534 2741922 - 2741902 - g 100 -6.7 -5.82316 | overlap 2741903 2741917 ACCATGCAAAAAAAA TCGCCCGGA TAA TCAGGGCGC AGACCACGCTCGCAA TERM 3535 2741921 - 2741903 - g 86 -10.2 -4.07763 | overlap 2741902 2741917 CCATGCAAAAAAAAT CGCCCGGA TAA TCAGGGCG CAGACCACGCTCGCA SeD_A2867 2741831 - 2741974 + | hypothetical protein TERM 3536 2742006 - 2741993 - f 83 -2.3 -5.78622 | TTACCGCAAAAAAAA CGTGG GGAA CCAGG CAGTGACCGATAAGA purM 2742009 - 2743046 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 3537 2743172 - 2743156 - g 70 -9.4 -3.73914 | overlap 2743157 AGTATTCAGCAATAA GGCCGA CGCGT TCGGCC TTGAACGCGCCAGAG TERM 3538 2743203 - 2743190 - g 71 -9.5 -3.494 | opp_overlap 2743191 GAACGCGCCAGAGAA GCCGG CATT CCGGC GCAAGCGCTGACTGC purN 2743046 - 2743684 + | phosphoribosylglycinamide formyltransferase TERM 3539 2745273 - 2745263 - gf 91 -6.8 -5.27477 | ACTTCAACGAAAAAA CAGC GCG GCTG TATACCGATTATTCG ppk 2743873 - 2745939 + | polyphosphate kinase TERM 3540 2746096 - 2746070 - gT 83 -10.1 -4.07687 | ATCGGGCGTTTAAAA CAGCGCGTCCA TCTGG CGGACGGGCTG GGCGCAGATAATAAA TERM 3541 2746440 - 2746471 + GT 88 -12.4 -3.53343 | gap 1, overlap 2746444 2746446 TGGTTGAAAGCCGTC GTATGGGCTGCGTGA GCT TCGCGCAGCTC-TAC TTTCCCGGCGGCGTT TERM 3542 2746444 - 2746468 + GT 87 -14.3 -2.90496 | overlap 2746440 2746446 TGAAAGCCGTCGTAT GGGCTGCGTGA GCT TCGCGCAGCTC TACTTTCCCGGCGGC TERM 3543 2746446 - 2746466 + GT 82 -13.3 -3.00525 | overlap 2746444 2746440 AAAGCCGTCGTATGG GCTGCGTGA GCT TCGCGCAGC TCTACTTTCCCGGCG SeD_A2871 2745905 - 2747485 + | exopolyphosphatase TERM 3544 2747493 - 2747519 + T 100 -18 -3.78022 | opp_overlap 2747488 2747487, overlap 2747495 CCGCGTAAATTGTGA GCCAGACGCCGC GCC GCGGCGTCTGTC TTTACTGAATCTCAG TERM 3545 2747495 - 2747517 + T 100 -19.2 -3.47361 | opp_overlap 2747488 2747487, overlap 2747493 GCGTAAATTGTGAGC CAGACGCCGC GCC GCGGCGTCTG TCTTTACTGAATCTC SeD_A2872 2749734 - 2747521 - | cyclic diguanylate phosphodiesterase domain protein TERM 3546 2749884 - 2749857 - H 70 -2.1 -4.96388 | opp_overlap 2749852, overlap 2749852 AATTATTAAACAAAA GTAACATTTGA TTTAAG TCAATTATTAC CTTTCTCCTGCAGCC SeD_A2873 2750195 - 2750338 + | putative inner membrane protein TERM 3547 2751843 - 2751824 - T 100 -10 -5.42975 | opp_overlap 2751824 GCACATAAATAAAAA CCCTCTGC AAAA ACAGAGGG TTAAATTCACTTTTA SeD_A2875 2753469 - 2751892 - | gmp synthase (glutamine-hydrolyzing) TERM 3548 2753532 - 2753509 - R 100 -13.9 -4.56113 | AACAGATTAAATAAA TCGCCCGAC GCGAAG GTCGGGCGA AGAAAATCAGGAGCC guaB 2755005 - 2753539 - | inosine-5'-monophosphate dehydrogenase TERM 3549 2754005 - 2753981 - G 71 -8.5 -3.85817 | opp_overlap 2754003, overlap 2754003 ATGTCGCCGGAGAAA CGGATACCGCC GTC AGCGATAACCG GAATCCCGGTGCCTT TERM 3550 2756357 - 2756387 + G 81 -11.9 -3.53012 | gap 1 CTGGAAGCGGTCAGC CCGT-TAGCCACGC TGGC GCGCGGCTATACGG TTTCGACGACAACGG xseA 2755166 - 2756515 + | exodeoxyribonuclease VII, large subunit TERM 3551 2756643 - 2756665 + T 100 -12.7 -4.57474 | gap 1, opp_overlap 2756643 TCATTCGCCTCAAAA CCGGGCAGGG AACA CCC-GCCCGG TTTTGTCTAACTTAC TERM 3552 2756665 - 2756643 - T 100 -14.1 -4.08216 | opp_overlap 2756643 TCATTCGCCTCAAAA CCGGGCAGG GAACA CCCGCCCGG TTTTGTCTAACTTAC TERM 3553 2759438 - 2759450 + T 79 -7.7 -4.40804 | overlap 2759421 2759435 CGTGCCCTGGCTCAG CGCAA GCG TTGCG TTTTCTGCAATCGTC TERM 3554 2759685 - 2759707 + T 73 -11.2 -2.52834 | overlap 2759684 AAAGTGCCATGCGCA GCGCGCGCAG AAT TTGCGCCCGC GTTGATCGTCAGATA TERM 3555 2761257 - 2761276 + T 76 -4.2 -5.05116 | gap 1, opp_overlap 2761261, overlap 2761259 2761260 2761261 GCAGCCACGGCGCAA GCCA-GCGC CGC GCGCGTTGC TTTTATTATTTGTCC TERM 3556 2761329 - 2761342 + T 74 -8.1 -3.8822 | GAATGGATTTCACTC GCGCA TACT TGCGC TTTAACTTTGCTGTG TERM 3557 2763185 - 2763199 + T 71 -3.4 -4.74706 | opp_overlap 2763164 2763185 GTATTCCGCATCACA GCCGGT TGC GCCCGC TTTTTCAGTGTTCGC TERM 3558 2765041 - 2765091 + T 86 -11.7 -3.56643 | opp_overlap 2765039 2765040 GCGTAGCGCTAAACT CGCTGGCCAGCAGCGGACGCCTG TACGC CACGCCGCTGCTGTCGGTCAGCG TTTCCGCCATATGGC TERM 3559 2765195 - 2765211 + T 87 -10.8 -4.07568 | overlap 2765206 GCCGTTGTGTTCTAT CGCCGC CGTCA GCGGCG TTTTAAAGCCCGCGC TERM 3560 2766165 - 2766180 + T 77 -10.4 -3.33798 | overlap 2766163 GCCGAGACGATGCCG TCGCCG CTAC CGGCGA TATGTTTCTCCCCCT TERM 3561 2766231 - 2766262 + T 95 -12.2 -4.15854 | opp_overlap 2766230 2766231 CGGCTGAGCACAAAT GGCGCTTGCGGCAG CGGA TTGCCGCCGGCGTC TTTTACCGTGACTTT TERM 3562 2766284 - 2766296 + T 72 -4.7 -4.66833 | CGTGACTTTAAGCTG GAGCG TAT CGCCC TTTTTCACCTTCACC TERM 3563 2766680 - 2766710 + T 72 -8.8 -3.55563 | overlap 2766681 2766698 ATCCTGCTCCTGGGT ACGGGTGGCGGCAG TCG CTTCCGCCGCCAGC TTTGGCCGCTGGAAT TERM 3564 2766681 - 2766709 + T 78 -12.3 -2.73124 | overlap 2766680 2766698 TCCTGCTCCTGGGTA CGGGTGGCGGCAG TCG CTTCCGCCGCCAG CTTTGGCCGCTGGAA TERM 3565 2766982 - 2766972 - T 72 -8.2 -3.66803 | TGGGAAGAGCCGAAA GGCG TTC CGCC CATCACCAGCGTTCC TERM 3566 2768350 - 2768370 + T 100 -16.9 -2.90763 | opp_overlap 2768337 AGGTGTAGCTTGCGC CGTCCACCG TGG CGGTGGACG TCTCTGCCATATGAC SeD_A2881 2771245 - 2769554 - | RatA TERM 3567 2771192 - 2771210 + g 74 -4.5 -4.70879 | overlap 2771183 2771194 GGTAGTGGTGATGAG TAGCGGG ATCGA CTCGCTG TTTTTCGCCTTTACC TERM 3568 2773435 - 2773463 + rH 82 -11 -3.56378 | gap 1, overlap 2773416 2773433 2773426 GTCCGGCATCACGAT GCGG-ATGGGCGT TTCG ACGCCCAGGCCGC TGTTATGTTTTAACG TERM 3569 2775225 - 2775191 - RH 100 -15.9 -3.17075 | TCTGTCGTAATTCAA CCCACTTTGCTTAGC GCGCG GCTAAGCAAAGTGCG CGGAAAATACCACTC TERM 3570 2775256 - 2775233 - RH 100 -15.4 -4.0896 | opp_overlap 2775233 2775235 AAAGTGCGCGGAAAA TACCACTCCC CGCG GGGAGTGGTA TGTTGAGGACAACTT TERM 3571 2775233 - 2775256 + rH 93 -15.4 -3.02043 | opp_overlap 2775233, overlap 2775235 AAAGTGCGCGGAAAA TACCACTCCC CGCG GGGAGTGGTA TGTTGAGGACAACTT TERM 3572 2775235 - 2775254 + rH 85 -13.6 -3.06696 | opp_overlap 2775233, overlap 2775233 AGTGCGCGGAAAATA CCACTCCC CGCG GGGAGTGG TATGTTGAGGACAAC SeD_A2884 2776229 - 2775270 - | putative outer membrane protein SeD_A2883 2776184 - 2776306 + | hypothetical protein SeD_A2885 2778479 - 2776287 - | Aec1 TERM 3573 2776795 - 2776829 + g 84 -3.4 -5.38249 | overlap 2776799 ATAAACACGCAGGGG GTTTCCGTGGTGCAGG GCG TCTGGGCCAGGGTGAC TTTTTTATCATTGCT TERM 3574 2778308 - 2778324 + g 83 -8.1 -4.50841 | overlap 2778302 CAGCGCCCTGTTCTT TAAAGGA CTT TCCTTTA TTTTCCTGTTCTTCT TERM 3575 2778795 - 2778822 + r 72 -4.8 -4.71426 | gap 1, opp_overlap 2778782, overlap 2778798 AAGACGTCGGCGCCT CTGCTCTGCGGCG CAA CGTCG-ACAGCGG TTTTATTGATCGGAA SeD_A2886 2779046 - 2778825 - | hypothetical protein TERM 3576 2779113 - 2779086 - R 79 -10.6 -3.60296 | gap 1, opp_overlap 2779081 TACTTTTACTTGAAA GGCCTGA-TAGCG CAG CGCTTGTCAGGCC TGGAATATTACTGAA TERM 3577 2780702 - 2780672 - R 75 -11.2 -2.94422 | opp_overlap 2780677, overlap 2780677 CATTGTTAAAAACAG GAAAACGGCCCCTA CAC CAGGAGCCGTTTTT TAAAACGCACAACCG TERM 3578 2780697 - 2780677 - R 95 -11.1 -4.60746 | opp_overlap 2780677, overlap 2780672 TTAAAAACAGGAAAA CGGCCCCTA CAC CAGGAGCCG TTTTTTAAAACGCAC TERM 3579 2780677 - 2780697 + r 91 -8.2 -5.00616 | opp_overlap 2780677 2780672 TTAAAAACAGGAAAA CGGCCCCT ACACC AGGAGCCG TTTTTTAAAACGCAC SeD_A2888 2781902 - 2780724 - | outer membrane assembly lipoprotein YfgL TERM 3580 2781154 - 2781134 - G 71 -7.5 -3.94 | opp_overlap 2781134, overlap 2781150 CCAACGCGTAAACAA CGCCGTTTA CCA CAACCGGCG TGGTATCAACGTCGC SeD_A2889 2782533 - 2781913 - | hypothetical protein TERM 3581 2781994 - 2782008 + g 79 -2.7 -5.25803 | overlap 2781994 2781995 GACGCCCGCTTCCCA TGCGC TGCGC GCGCC TTTTTTATCACCCTT TERM 3582 2782272 - 2782282 + g 91 -6.8 -5.18726 | opp_overlap 2782244 CCATAGACGCCAGCG CACC ATA GGTG TTTTTATTCTCAGCC TERM 3583 2782608 - 2782560 - R 76 -8.1 -4.1822 | gap 1, opp_overlap 2782589 2782600 CCTTAGCCCAATAAA GTGCGCAAATGCGCGGCGACGC TGTCCT GCGCCACTGC-CGTTTGCTCAC CGGAGCGCAAATCCT hisS 2783821 - 2782547 - | histidyl-tRNA synthetase TERM 3584 2783713 - 2783729 + g 70 -3 -4.71061 | gap 1 GGATTTCACTGTAAC CGTAGCT GCCG AGC-ACG TTTTTGAGTGTGCCT TERM 3585 2783785 - 2783810 + g 84 -6.1 -5.03747 | opp_overlap 2783785 CGCCAGGCAGATAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3586 2783894 - 2783848 - R 80 -5.8 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAGCGCTTCCCCG AACGAA CCGGG-AGCCATGCGGGTTCA ATCATACACGGGAAG TERM 3587 2783923 - 2783903 - R 82 -13.3 -3.00298 | opp_overlap 2783897 GGGTTCAATCATACA CGGGAAGCG CGC CGCTTCCCA TCACGTTCTTATTTT ispG 2785050 - 2783932 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase SeD_A2893 2786081 - 2785077 - | helix-turn-helix domain protein TERM 3588 2785470 - 2785492 + g 70 -9 -3.64703 | overlap 2785471 2785482 2785483 TACCGTATTTTGCGT TGCCGCCGCC GTT GGCGCTGGCG TTTGCGTCGCCGCCG TERM 3589 2785482 - 2785540 + g 95 -14.5 -3.60627 | gap 2, opp_overlap 2785517, overlap 2785471 2785470 2785483 2785527 2785530 CGTTGCCGCCGCCGT TGGCGCTGGCGTTTGCGTCGCCGCCGTCG AAT CAAC--CGGCGTCGCAGGCGCCGGAGCCG TTTGCGCTGGCGTCG TERM 3590 2785483 - 2785539 + g 86 -15.8 -2.76162 | gap 2, opp_overlap 2785517, overlap 2785471 2785470 2785482 2785527 2785530 GTTGCCGCCGCCGTT GGCGCTGGCGTTTGCGTCGCCGCCGTCG AAT CAAC--CGGCGTCGCAGGCGCCGGAGCC GTTTGCGCTGGCGTC TERM 3591 2785535 - 2785517 - G 75 -11.6 -3.33696 | opp_overlap 2785483 2785482 2785527 2785530 CCGCCGTCGAATCAA CCGGCGTC GCA GGCGCCGG AGCCGTTTGCGCTGG TERM 3592 2785985 - 2785973 - G 70 -9.1 -3.66095 | AAACCTTCAGGCAAA GTCGC TCA GCGAC AGCCTGCTGGCTGAG SeD_A2894 2786340 - 2786218 - | type IV pilus biogenesis/stability protein PilW SeD_A2895 2787539 - 2786373 - | radical SAM enzyme, Cfr family TERM 3593 2787629 - 2787597 - R 85 -7 -5.04249 | gap 2, opp_overlap 2787596 2787593, overlap 2787599 GGTTGAAAAAAGAAA CGCC-CCGG-TAAGCA TAC TGCTCGTCCGGGGGCG CTGCATTGTACAAAT ndk 2788177 - 2787746 - | nucleoside diphosphate kinase SeD_A2897 2789161 - 2788298 - | putative polyferredoxin TERM 3594 2789081 - 2789051 - G 100 -13.3 -4.18018 | overlap 2789071 CTGCGCCAGCGAAAA CGCCTGCGCCG GACAAACAT CGGCGCAAGCG CGGCAGGAAGAAAAA TERM 3595 2789137 - 2789102 - G 85 -9.1 -4.43037 | gap 2 GGAAGAAAAACGAAA GCGAC-GACG-GACGCA AGCC TGCGTCACGTCTACCGC CGGATCGATCGTCAG SeD_A2898 2789970 - 2789161 - | putative anaerobic reductase component TERM 3596 2789852 - 2789830 - G 76 -9.1 -3.9712 | gap 1 GCAGGCCAGTACAAA CGCC-CCCGC CATC GCGGGAAGCG CGCCGCGTGCAGGCA dmsB 2790592 - 2789963 - | dimethylsulfoxide reductase, chain B SeD_A2900 2792967 - 2790589 - | anaerobic dimethyl sulfoxide reductase chain a TERM 3597 2792478 - 2792455 - G 80 -9.4 -4.08767 | overlap 2792469 TTTATCGCCGGAAAA GGTGCCGCCG GAAA CGGCGGTGCC AACATGAACATAGCG TERM 3598 2792938 - 2792951 + g 86 -3.8 -5.36364 | overlap 2792919 AATAGCGGGCTGTTC GCCA TTTCCC TGGC TTTTTATATTTTTCA pbpC 2795438 - 2793123 - | penicillin-binding protein 1C TERM 3599 2793233 - 2793218 - G 78 -6.1 -4.70887 | TGAGTAATAAAGAAA GGCGA TTATTT TCGCC ATTAACAGGTTCGCC TERM 3600 2793286 - 2793258 - G 71 -4.5 -4.65895 | TTCGCCATTTAAAAA CCACCAGCGAC GCCCTTT ACCGCCGGTAG TCGAGACGGGCAGCG TERM 3601 2794695 - 2794667 - G 73 -5.1 -4.57569 | TCATTCGGGCAAAAA GCGGCGCCAGTTG CGG CATTTGACGCGGC GCCAGCCAGACCGGC TERM 3602 2795396 - 2795384 - G 100 -6.2 -5.50723 | opp_overlap 2795388, overlap 2795385 2795386 CCAGGAAAATAAAAA GCGG CGCGC CCGC CAGCCACAGCCAGCG TERM 3603 2795714 - 2795724 + H 71 -6.8 -4.11216 | overlap 2795694 2795693 TGGCGCTGCTGTCAG CCAG ATT CTGG TTTTCCAGCTCCAGC TERM 3604 2796421 - 2796434 + H 80 -9.5 -3.96148 | CAGATTTCGCGCAGC GCGCC GAGC GGCGC TTTCTGCTGACGCGC TERM 3605 2796731 - 2796743 + H 76 -4.7 -4.76041 | AGATGCCGATATCCA CCGCG GCG CGCCG TTTTTCATCGCTATC TERM 3606 2798407 - 2798417 + H 73 -2.4 -5.252 | opp_overlap 2798407 AGCCGCACCTGTAAA CCGG ACA CCGC TTTTTTCTCGCCCTG TERM 3607 2798901 - 2798911 + H 91 -8.2 -5.02074 | overlap 2798894 2798893 CACCTCATCCGCAGG CGCC AGC GGCG TTTTTTGCGCCGTCA TERM 3608 2800217 - 2800227 + H 77 -6.8 -4.45083 | CTTTGCCCTAGCTTT GCTG CGC CAGC TTTTGTAGCTGTGCC TERM 3609 2800705 - 2800734 + G 100 -8.5 -5.27779 | opp_overlap 2800687 2800707, overlap 2800694 2800707 2800708 GATATGGCGGGCGAA TATCGCGCCGG ACATATTC CCGGCGCGCTG TTTTTTGATATTGAA TERM 3610 2800707 - 2800732 + G 84 -8.9 -4.26398 | opp_overlap 2800687 2800707, overlap 2800694 2800705 2800708 TATGGCGGGCGAATA TCGCGCCGG ACATATTC CCGGCGCGC TGTTTTTTGATATTG TERM 3611 2800708 - 2800731 + G 76 -12.4 -3.14212 | opp_overlap 2800687 2800707, overlap 2800694 2800707 2800705 ATGGCGGGCGAATAT CGCGCCGG ACATATTC CCGGCGCG CTGTTTTTTGATATT TERM 3612 2801102 - 2801117 + G 77 -8.2 -4.11216 | opp_overlap 2801085 2801094 CGCAAATCGTTGACG CGCGTC CGGC GGCGCG TTTTAACGCTCAGGC SeD_A2904 2800582 - 2801424 + | hypothetical protein SeD_A2905 2801628 - 2801404 - | hypothetical protein SeD_A2906 2801670 - 2802338 + | putative cytoplasmic protein SeD_A2907 2802521 - 2802393 - | hypothetical protein TERM 3613 2802466 - 2802426 - G 83 -15 -2.71263 | gap 1, opp_overlap 2802439, overlap 2802439 AATTCGGTTTAAGCA GGTCACAAAAAAACCGCTC AATT GAGCGGTTTTTTTGTG-CT GGTCCGGTTCGCGGC TERM 3614 2802454 - 2802439 - G 100 -10.4 -5.626 | opp_overlap 2802439, overlap 2802426 CAGGTCACAAAAAAA CCGCTC AATT GAGCGG TTTTTTTGTGCTGGT TERM 3615 2802439 - 2802454 + g 100 -10.4 -5.67967 | opp_overlap 2802439 2802426 CAGGTCACAAAAAAA CCGCTC AATT GAGCGG TTTTTTTGTGCTGGT TERM 3616 2802665 - 2802704 + r 76 -12.1 -2.57211 | opp_overlap 2802663 2802660, overlap 2802664 2802692 AGAGGATAACCCATG GCCGTAAGCGCAGGCAC ACCGTA GTGCCTGCTATCACGGC ATTATCGCCAGCGGT TERM 3617 2802692 - 2802734 + r 78 -12.1 -3.01712 | gap 1, opp_overlap 2802663 2802660, overlap 2802665 2802664 2802713 2802717 GGCACACCGTAGTGC CTGCTATCACGGCATTATCG CCAG CGGTGCTGCCGTGAT-GCGG TCTTCGCAAGGACCG TERM 3618 2802875 - 2802900 + r 100 -14.7 -4.66318 | opp_overlap 2802875, overlap 2802879 AGAGCAGGTAAGCCA GGAGGCCGCCC TGTT GGGCGGCTTTC TTTTCTTCAGATGAT TERM 3619 2802900 - 2802875 - R 70 -10.3 -2.55722 | opp_overlap 2802875 2802879 AGAGCAGGTAAGCCA GGAGGCCGCCC TGTT GGGCGGCTTTC TTTTCTTCAGATGAT TERM 3620 2802879 - 2802896 + r 100 -14.1 -4.87892 | opp_overlap 2802875, overlap 2802875 CAGGTAAGCCAGGAG GCCGCCC TGTT GGGCGGC TTTCTTTTCTTCAGA sseB 2803653 - 2802907 - | SseB protein TERM 3621 2803485 - 2803506 + g 75 -5.9 -4.60487 | gap 1, opp_overlap 2803488, overlap 2803484 2803489 GAGAAGTAAAGAAGG GAATGACGGT CGT GCCGTC-TTC TTTTTCCCAGTGCTG TERM 3622 2803489 - 2803503 + g 79 -7.8 -4.41633 | opp_overlap 2803488, overlap 2803484 2803485 AGTAAAGAAGGGAAT GACGGT CGT GCCGTC TTCTTTTTCCCAGTG TERM 3623 2803736 - 2803724 - R 70 -9.1 -3.30124 | opp_overlap 2803735 TTGTAGGCCTGATAA GACGC ACG GCGTC GCCATCAGGCAAAAT TERM 3624 2803735 - 2803763 + r 77 -10.9 -3.17075 | opp_overlap 2803724 2803751 2803752 ATAAGACGCACGGCG TCGCCATCAGGCA AAA TGCCGGGTGGCGC TTCGCTTACCCGGCC TERM 3625 2803778 - 2803751 - R 76 -7.6 -4.21194 | gap 1, opp_overlap 2803735, overlap 2803752 CGCCATCAGGCAAAA TGCCGGGT-GGCG CTT CGCTTACCCGGCC TACAAAAACACCGCT TERM 3626 2803777 - 2803752 - R 77 -11.1 -3.12395 | gap 1, opp_overlap 2803735, overlap 2803751 GCCATCAGGCAAAAT GCCGGGT-GGCG CTT CGCTTACCCGGC CTACAAAAACACCGC TERM 3627 2803802 - 2803787 - R 73 -4.6 -4.82901 | overlap 2803789 CCCGGCCTACAAAAA CACCGC TCAG GCGGTC AGCAAATTCGCGATG TERM 3628 2803800 - 2803789 - R 71 -7.2 -4.03995 | overlap 2803787 CGGCCTACAAAAACA CCGC TCAG GCGG TCAGCAAATTCGCGA SeD_A2910 2805076 - 2803793 - | peptidase B TERM 3629 2803966 - 2803941 - G 83 -7.4 -4.53705 | opp_overlap 2803939 2803941, overlap 2803943 AAGTGCGACAGAAAA CCCGCGGCGG TGCTTG CCCCAGCGGG ATACGCCGCGCTGCC TERM 3630 2805092 - 2805127 + r 76 -7.4 -4.29396 | opp_overlap 2805099, overlap 2805094 2805095 2805099 TGTTATTTTCCTTAT TAGCAAACGGGCCGCC GTAG GGCAGCCCGTTAGATC TTTTGCTAAATGATT TERM 3631 2805094 - 2805125 + r 79 -10 -3.745 | opp_overlap 2805099, overlap 2805092 2805095 2805099 TTATTTTCCTTATTA GCAAACGGGCCGCC GTAG GGCAGCCCGTTAGA TCTTTTGCTAAATGA TERM 3632 2805095 - 2805124 + r 82 -13.5 -2.84218 | opp_overlap 2805099, overlap 2805094 2805092 2805099 TATTTTCCTTATTAG CAAACGGGCCGCC GTAG GGCAGCCCGTTAG ATCTTTTGCTAAATG TERM 3633 2805099 - 2805120 + r 86 -12.9 -3.29856 | opp_overlap 2805099, overlap 2805095 2805094 2805092 TTCCTTATTAGCAAA CGGGCCGCC GTAG GGCAGCCCG TTAGATCTTTTGCTA TERM 3634 2805120 - 2805099 - R 100 -15.1 -3.78775 | opp_overlap 2805099 2805095 2805094 2805092 TTCCTTATTAGCAAA CGGGCCGCC GTAG GGCAGCCCG TTAGATCTTTTGCTA iscX 2805454 - 2805254 - | FeS assembly protein IscX fdx 2805801 - 2805466 - | ferredoxin, 2Fe-2S type, ISC system hscA 2807653 - 2805803 - | Fe-S protein assembly chaperone HscA hscB 2808181 - 2807666 - | Fe-S protein assembly co-chaperone HscB TERM 3635 2807750 - 2807768 + g 100 -16 -3.33315 | GCGCACCGTATCCGC CGCCGCGT CCC ACGCGGCG TTGTCCAACTGTTCC TERM 3636 2807923 - 2807912 - G 71 -7.2 -3.96148 | opp_overlap 2807914 TTGTTCCATCAGAAA CGCG GTGT CGCG TACCGTATGTTGCTC TERM 3637 2808239 - 2808213 - R 79 -8.7 -4.30719 | gap 1, opp_overlap 2808213 GCCTGTCAGAACAAA CCCCACACGCAG GCGA CCACG-GTGGGG TTATACCTTCTTACT iscA 2808700 - 2808377 - | iron-sulfur cluster assembly protein IscA iscU 2809115 - 2808729 - | FeS cluster assembly scaffold IscU iscS 2810357 - 2809143 - | cysteine desulfurase IscS SeD_A2918 2810410 - 2810529 + | hypothetical protein iscR 2811032 - 2810538 - | iron-sulfur cluster assembly transcription factor IscR TERM 3638 2811055 - 2811067 + r 91 -6.2 -5.55769 | TTAACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA SeD_A2920 2811923 - 2811192 - | RNA methyltransferase TERM 3639 2811602 - 2811590 - G 70 -3.3 -4.77036 | overlap 2811591 2811593 GCTCACGACCAAAAA CCAGC GCA ACCGG CGTATTTGCCGCTTC TERM 3640 2811806 - 2811844 + g 74 -6.6 -4.25104 | opp_overlap 2811810, overlap 2811797 GGGAGTCCGGTTTCA CCAACGGGTTTACCAGCC ACA GGTTGGTTAAGCCCATGG TTTTCATAGCGCGAG TERM 3641 2812060 - 2812088 + G 72 -12.3 -2.69964 | overlap 2812055 CATCCGATGCTGACC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATGTAATTGCCAA suhB 2812042 - 2812845 + | inositol-1-monophosphatase TERM 3642 2812853 - 2812878 + F 95 -16.9 -2.74784 | overlap 2812850 2812849 AGCGCTAAGTCTCTT CGGCGGATGGG GCCA CTCATCCGCCG TGCCTTTTCAGGCGT TERM 3643 2813229 - 2813217 - g 70 -6.9 -4.09685 | opp_overlap 2813217 2813216 2813219 CGGCAGGCCGGAAAA CGCCG TCG CGACG GTGATTCATGTCCAT SeD_A2922 2812990 - 2813802 + | hypothetical protein TERM 3644 2814060 - 2814084 + G 95 -11.3 -4.57569 | GGCGCGTGTTTGCCC CGTCCGCAGAG TTT CGCGGCGGACG TTTTTCCGACACTGA TERM 3645 2814866 - 2814842 - g 71 -4.2 -4.56597 | gap 1, overlap 2814844 GGTTTTCGCGAAAAA CCCGGCGAGCG TCTG CGCT-ACCGCG CCCTGCATAAGGTCA asrA 2813984 - 2815027 + | sulfite reductase, subunit A TERM 3646 2815082 - 2815058 - g 74 -8.6 -3.96148 | gap 1 TCCTGTCATGATAAA CCGCAGCACAG TTTG CTGC-CTGCGG CGTACCGCATCCTCA asrB 2815031 - 2815849 + | sulfite reductase, subunit B TERM 3647 2816609 - 2816597 - g 93 -9.1 -4.77438 | overlap 2816599 2816600 ACGCACCAGTAAAAA GACGC CGC GCGTC GGCAAGCTCTTCCTC asrC 2815860 - 2816873 + | sulfite reductase, subunit C SeD_A2926 2817860 - 2816874 - | high-affinity nickel-transporter SeD_A2927 2818519 - 2817851 - | hypothetical protein TERM 3648 2818966 - 2818950 - g 100 -10.1 -5.00616 | opp_overlap 2818959, overlap 2818959 2818962 CCCGGCCTTAAAAAA CGCGCTA AAG CAGCGCG GTATCGCGCGTCCGC TERM 3649 2819329 - 2819346 + G 74 -10.5 -3.53012 | CTGCGACTGGAGGTG GCGCGGC TGGT GCTGCGC TTTCGAGAAAAAGGG TERM 3650 2819764 - 2819752 - g 71 -4.7 -4.62783 | opp_overlap 2819763 CAGGCATTTCAAAAA GAGGG ATG CCCGC GCGGCGTAGCGCTGA SeD_A2928 2818615 - 2819892 + | stationary phase-inducible protein CsiE SeD_A2929 2821026 - 2819887 - | probable 3-phenylpropionic acid transporter TERM 3651 2821157 - 2821119 - R 93 -12.5 -3.69621 | gap 1, opp_overlap 2821120 2821121, overlap 2821120 AGGGAGAAGTTCAAA CGGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCA-CG TTATGGCGCATAAGT TERM 3652 2821157 - 2821120 - R 79 -12.7 -2.81291 | opp_overlap 2821120 2821121, overlap 2821119 GGGAGAAGTTCAAAC GGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCACG TTATGGCGCATAAGT TERM 3653 2821121 - 2821156 + r 76 -11.8 -2.57931 | opp_overlap 2821119 2821120, overlap 2821120 GGAGAAGTTCAAACG GCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCAC GTTATGGCGCATAAG glyA 2822475 - 2821222 - | serine hydroxymethyltransferase SeD_A2931 2822759 - 2822613 - | hypothetical protein TERM 3654 2823965 - 2823951 - g 73 -5 -4.56133 | CGTGAATAACGAAAA CATTCA TTA CGAATG CTTCGGCCCTCATAA hmp 2822800 - 2823990 + | flavohemoprotein TERM 3655 2824041 - 2824014 - f 85 -6.9 -5.01732 | opp_overlap 2824014, overlap 2824002 AATCCGCTGAAAAAA CGGGCGTTATC GTTAAG GCGAACGCCCG TTTTCCTCCCTGTTC TERM 3656 2824014 - 2824041 + F 74 -6.9 -4.30809 | opp_overlap 2824002 2824014 AATCCGCTGAAAAAA CGGGCGTTATC GTTAAG GCGAACGCCCG TTTTCCTCCCTGTTC TERM 3657 2824653 - 2824639 - g 81 -7 -4.7657 | opp_overlap 2824639, overlap 2824632 TAAAAAGGCGAAAAA GCCGCG TAT CGCCGC TTTCTGGACGTGGGT TERM 3658 2825182 - 2825193 + G 72 -3.6 -4.82901 | opp_overlap 2825169, overlap 2825185 AACGCCGCAAAATAC CGCG CTGA TGCG TTTTTATGAGGCGCG SeD_A2933 2824172 - 2825716 + | transcriptional activator CadC TERM 3659 2825773 - 2825740 - f 73 -7.8 -4.04209 | gap 1, opp_overlap 2825740 2825745, overlap 2825745 CTAAACCATGACAAA TAAAAGCGAAAAGAT ATTAA AT-TTTTCGCTTTTA TTTTGTGAAAAACAT TERM 3660 2825740 - 2825773 + F 83 -9.1 -4.37092 | opp_overlap 2825740 2825745, overlap 2825745 CTAAACCATGACAAA TAAAAGCGAAAAGAT ATTA AATTTTTCGCTTTTA TTTTGTGAAAAACAT TERM 3661 2825745 - 2825768 + F 79 -4.6 -5.18371 | opp_overlap 2825740 2825745, overlap 2825740 CCATGACAAATAAAA GCGAAAAGAT ATTA AATTTTTCGC TTTTATTTTGTGAAA TERM 3662 2825768 - 2825745 - f 74 -3.3 -5.02323 | gap 1, opp_overlap 2825745 2825740, overlap 2825740 CCATGACAAATAAAA GCGAAAAGAT ATTAA AT-TTTTCGC TTTTATTTTGTGAAA TERM 3663 2825825 - 2825786 - f 93 -10.2 -4.57569 | opp_overlap 2825786 2825788, overlap 2825788 TTATTTTGTGAAAAA CATGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACATA TTCATTGCAAAGATA TERM 3664 2825786 - 2825825 + F 77 -10.2 -3.34013 | opp_overlap 2825786 2825788, overlap 2825788 TTATTTTGTGAAAAA CATGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACATA TTCATTGCAAAGATA TERM 3665 2825788 - 2825823 + F 81 -12.8 -3.23853 | opp_overlap 2825786 2825788, overlap 2825786 ATTTTGTGAAAAACA TGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACA TATTCATTGCAAAGA TERM 3666 2825823 - 2825788 - f 84 -10.6 -3.90316 | opp_overlap 2825788 2825786, overlap 2825786 ATTTTGTGAAAAACA TGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACA TATTCATTGCAAAGA TERM 3667 2826279 - 2826268 - g 83 -5.8 -4.8622 | opp_overlap 2826272 2826275 GCTGGCAACCAAAAA CCCT CAAC AGGG TGGCCCTATCGCTTA TERM 3668 2826373 - 2826389 + G 78 -6.5 -4.54553 | overlap 2826376 GATTGGTAACTTAGC CATCGGT ATT ACCGCTG TTTCTTATCTTTCTA SeD_A2934 2826077 - 2827408 + | lysine/cadaverine transport protein SeD_A2935 2827491 - 2829635 + | lysine decarboxylase, constitutive TERM 3669 2829674 - 2829636 - f 76 -8.3 -4.14543 | gap 1, opp_overlap 2829644, overlap 2829633 2829644 GAAAATACGAAATAA GT-ACCAAAGGGAAGTGG CTTG CCACTTCCCTTTTTTCAC GCAGCAAGGAGACTT TERM 3670 2829665 - 2829644 - f 100 -14.5 -3.90738 | opp_overlap 2829644, overlap 2829636 2829633 GAAATAAGTACCAAA GGGAAGTGG CTTG CCACTTCCC TTTTTTCACGCAGCA TERM 3671 2829644 - 2829665 + F 100 -14.5 -5.00616 | opp_overlap 2829636 2829633 2829644 GAAATAAGTACCAAA GGGAAGTGG CTTG CCACTTCCC TTTTTTCACGCAGCA SeD_A2936 2829691 - 2831151 + | inner membrane transporter YbgH SeD_A2937 2831538 - 2831200 - | nitrogen regulatory protein P-II SeD_A2938 2832952 - 2831615 - | transcriptional regulatory protein ZraR SeD_A2939 2833635 - 2832949 - | hypothetical protein TERM 3672 2833311 - 2833334 + g 73 -5.2 -4.65895 | gap 1, overlap 2833314 2833316 CCAGACGGGTCACTA TGGCG-CGCCG CTC CGGCGGCGTAA TTTTTGCATCCGCCA TERM 3673 2833316 - 2833331 + g 78 -11.8 -3.26405 | overlap 2833314 2833311 CGGGTCACTATGGCG CGCCGC TCCG GCGGCG TAATTTTTGCATCCG TERM 3674 2835104 - 2835092 - H 78 -5.5 -4.78107 | CAGGATCAGCAAAAA GGCCA GCA TGACC AATTGTCGTAAAGAA TERM 3675 2835234 - 2835204 - H 100 -17 -2.89742 | opp_overlap 2835207 2835211, overlap 2835207 2835211 GGGAAGCGCCAGATA CAACAAAGCCGGGC TAA ACCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3676 2835207 - 2835231 + H 100 -15.8 -3.32844 | opp_overlap 2835204 2835207 2835211, overlap 2835211 AAGCGCCAGATACAA CAAAGCCGGG CTAAA CCCGGCTTTG TTATGGAATAAGGCG TERM 3677 2835231 - 2835207 - H 100 -16.5 -3.5947 | opp_overlap 2835207 2835211, overlap 2835204 2835211 AAGCGCCAGATACAA CAAAGCCGGGC TAA ACCCGGCTTTG TTATGGAATAAGGCG TERM 3678 2835227 - 2835211 - H 95 -11.5 -4.42974 | opp_overlap 2835211 2835207, overlap 2835207 2835204 GCCAGATACAACAAA GCCGGGC TAA ACCCGGC TTTGTTATGGAATAA TERM 3679 2835211 - 2835227 + H 90 -10.8 -4.32177 | opp_overlap 2835207 2835204 2835211, overlap 2835207 GCCAGATACAACAAA GCCGGG CTAAA CCCGGC TTTGTTATGGAATAA SeD_A2942 2835408 - 2835536 + | hypothetical protein TERM 3680 2835601 - 2835620 + T 71 -7.8 -3.92324 | overlap 2835593 2835602 ACCTATCCCCCACTC ATGTCGGG ATTT CCCGACAC TTTAATCTTGCGGCA TERM 3681 2835602 - 2835619 + T 75 -11.3 -2.95073 | overlap 2835593 2835601 CCTATCCCCCACTCA TGTCGGG ATTT CCCGACA CTTTAATCTTGCGGC TERM 3682 2835775 - 2835757 - T 91 -7.4 -5.24129 | opp_overlap 2835757 GCCGTCTACAAAAAA GCCCCT CGTGAAT AGGGGC TTAATGGCTATCGGG purL 2839682 - 2835795 - | phosphoribosylformylglycinamidine synthase SeD_A2944 2839796 - 2839933 + | hypothetical protein TERM 3683 2839957 - 2839947 - g 78 -2.6 -5.1848 | opp_overlap 2839947 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG TERM 3684 2841211 - 2841201 - g 70 -3.2 -4.7629 | CTATTAAGCCAAAAA CCGT ATT ACAG TAAGTTAACCTACGG SeD_A2945 2839938 - 2841482 + | lytic transglycosylase, catalytic TERM 3685 2841540 - 2841568 + T 79 -9.4 -4.17132 | GCATTGCGCTATACT GCCGGCCCCGCG CCTTC CGCACGGTCGGC TTTCTTCAGGGCTTT SeD_A2946 2842051 - 2841533 - | tRNA-specific adenosine deaminase TERM 3686 2841708 - 2841720 + g 95 -10.5 -4.65895 | opp_overlap 2841703 ACATCAATTAGCGAT CCGGC CGC GCCGG TTTTTGCATCGCGCG yfhB 2842744 - 2842109 - | HAD superfamily (subfamily IF) hydrolase, YfhB TERM 3687 2842728 - 2842718 - G 81 -2.4 -5.38497 | overlap 2842720 2842721 2842723 ATCCAAATCAAAAAA GACG ACA CGAC GCTCGTGGCTGACCA SeD_A2948 2844109 - 2842748 - | phosphotransferase system, eiic TERM 3688 2843007 - 2842993 - G 71 -4.2 -4.62069 | GCGTGACGCCAAAAA TCAGCG GCT CGCCAA TCCCCAGCAGTCCGA murQ 2845013 - 2844120 - | N-acetylmuramic acid 6-phosphate etherase SeD_A2950 2845129 - 2845977 + | transcriptional regulator, RpiR family protein TERM 3689 2846009 - 2845981 - T 100 -15.4 -4.0896 | opp_overlap 2845977 2846001 AAACTGGTTTGAAAA TGGCTCTTCCGC CTCAT GCAGAAGAGCCA TCAAGTTTATTGCGC panE 2846933 - 2846016 - | 2-dehydropantoate 2-reductase SeD_A2952 2848151 - 2846955 - | major facilitator family transporter TERM 3690 2848486 - 2848444 - g 75 -3.7 -4.85545 | opp_overlap 2848445 2848448, overlap 2848445 2848448 ATTAAATTAACAAAA GCAGGCATTATTTTG-CAACG ACA CGCTAACAAAATAATG-CTGG ATTTAAAAAATGCCG SeD_A2953 2848267 - 2849193 + | putative transcriptional regulator SeD_A2954 2849231 - 2849491 + | ferredoxin acpS 2849983 - 2849603 - | holo-(acyl-carrier-protein) synthase TERM 3691 2849859 - 2849841 - G 74 -6.6 -4.36914 | CGCTTGGCGAGAAAA CGCACCGG CTG CTGATGCG TCTCCCAGATAGCCC pdxJ 2850714 - 2849983 - | pyridoxine 5'-phosphate synthase TERM 3692 2850182 - 2850204 + g 90 -10.5 -4.28254 | overlap 2850184 GCCGCCAGGGTCGCG GCGCTGGCG ATACG CGCCAGCTC TTTTGCCTGTTCCGC TERM 3693 2850184 - 2850202 + g 83 -11.7 -3.741 | overlap 2850182 CGCCAGGGTCGCGGC GCTGGCG ATACG CGCCAGC TCTTTTGCCTGTTCC recO 2851454 - 2850726 - | DNA repair protein RecO TERM 3694 2850767 - 2850784 + g 78 -6.9 -4.66264 | opp_overlap 2850766 2850765 GTTTGGGCATAAATT GCCGGAA CAGC TCCCGGC TTTTTAACGGTTTTC era 2852371 - 2851466 - | GTP-binding protein Era rnc 2853105 - 2852368 - | ribonuclease III TERM 3695 2852725 - 2852741 + g 75 -3.5 -4.8622 | opp_overlap 2852719, overlap 2852726 CGCCAGAATGGACTC TCGACGG AAT CCGCCGC TTTTTAATTCGCCCG TERM 3696 2853269 - 2853307 + r 75 -11.1 -2.96873 | gap 1, opp_overlap 2853272, overlap 2853266 AATTTATCCAGGAAA TAATTCACGCTGCCG-CT AAAA AGACGGCAGCGTGAACGA TCATTTCATCACAGT TERM 3697 2853304 - 2853272 - R 100 -17.2 -4.015 | gap 1, opp_overlap 2853269 2853266 TTATCCAGGAAATAA TTCACGCTGCCG-CT AAAA AGACGGCAGCGTGAA CGATCATTTCATCAC lepB 2854296 - 2853322 - | signal peptidase I lepA 2856112 - 2854313 - | GTP-binding protein LepA TERM 3698 2854409 - 2854423 + g 85 -2.1 -5.45652 | TTTCTTACCTTCTTT CTGTT TCTGC AGCAG TTTTTTCTTACGACT SeD_A2963 2856843 - 2856364 - | sigma-E factor regulatory protein RseC TERM 3699 2856587 - 2856577 - G 73 -5.4 -4.55295 | overlap 2856579 CGCCGCACAAAGAAA TAGC CCT GCTA AAGGCGACATATAGA rseB 2857796 - 2856840 - | sigma-E factor regulatory protein RseB TERM 3700 2857737 - 2857710 - G 83 -11.9 -3.61715 | opp_overlap 2857710 CATCTGCTGCAATAA CGCCCCGGACG CAGGGT CGGCCGAGGCG TTTGCTGAGAAGAAC TERM 3701 2857710 - 2857737 + g 74 -9.7 -3.72576 | opp_overlap 2857710 CATCTGCTGCAATAA CGCCCCGGACG CAGGGT CGGCCGAGGCG TTTGCTGAGAAGAAC rseA 2858446 - 2857796 - | sigma-E factor negative regulatory protein TERM 3702 2858147 - 2858167 + g 76 -3.2 -5.00616 | gap 1, overlap 2858148 GCCCATTTGGGTAAG CTGCG-CCG CCCA CGGACGCAC TTTTTTCCAGAACGG rpoE 2859053 - 2858478 - | RNA polymerase sigma-E factor TERM 3703 2859151 - 2859171 + r 73 -2.5 -5.1502 | overlap 2859153 TTAGAGTGTCTATGT TTCGTAAAG TTC CGTTACGCA TTTGTTTTTGTTTGT SeD_A2967 2859393 - 2859214 - | hypothetical protein TERM 3704 2859625 - 2859645 + G 70 -8.9 -3.72576 | overlap 2859622 2859628 TCCACGTTTTATGCG CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACCGAC nadB 2859478 - 2861100 + | L-aspartate oxidase TERM 3705 2861196 - 2861178 - f 77 -11.7 -2.90496 | overlap 2861175 TCTGTCGCTAAAGCA CTCCCCG GCTTG CGGGGAG AATGCGAGCAAAACC TERM 3706 2861858 - 2861845 - g 100 -9.5 -5.03145 | CAACCTTGCAAAAAA CGGCG ACAG CGCCG GGTGAAAACAATACC SeD_A2970 2861757 - 2861876 + | hypothetical protein TERM 3707 2862134 - 2862115 - g 80 -9.2 -4.11692 | CAGGCACCGGTAAAA CGGCGGCA TATC TGCTGCCG GCGTTGCAGCACCTG SeD_A2971 2861952 - 2863286 + | ATP-dependent RNA helicase SrmB TERM 3708 2863293 - 2863314 + T 100 -14.5 -5.80817 | opp_overlap 2863293 GAAGAGTGATGATAA TGCCGGGTT CGTT AACCCGGCA TTTTTTTATCTTCCA TERM 3709 2863314 - 2863293 - T 93 -14.5 -3.44206 | opp_overlap 2863293 GAAGAGTGATGATAA TGCCGGGTT CGTT AACCCGGCA TTTTTTTATCTTCCA SeD_A2972 2864203 - 2863304 - | LysR substrate binding domain protein SeD_A2973 2864306 - 2864893 + | translocator protein, LysE family TERM 3710 2864870 - 2864882 + T 77 -3.3 -5.14563 | overlap 2864869 TTACTGCTGGTGTAC TGCGC GGT GCGGA TTTTTTACTGACCCA TERM 3711 2864910 - 2864934 + T 100 -14.3 -3.94877 | opp_overlap 2864910 CCAAATAAAACAAAA GCGGAAAAGGC CCG GCCTCTTCCGC TTGTTATTACCGGAT TERM 3712 2864934 - 2864910 - T 100 -16.5 -5.34857 | opp_overlap 2864910 CCAAATAAAACAAAA GCGGAAAAGGC CCG GCCTCTTCCGC TTGTTATTACCGGAT grcA 2865338 - 2864955 - | autonomous glycyl radical cofactor TERM 3713 2866230 - 2866244 + G 91 -7.8 -5.1287 | CATCCCTCGCCACTC TCTGCG CAC CGCGGA TTTTTTGGCTGTAAC ung 2865657 - 2866346 + | uracil-DNA glycosylase TERM 3714 2866350 - 2866362 + T 74 -6.9 -4.37092 | overlap 2866351 GAGAGTGAATAACGT TGGCG ACT CGCCG TTTTATCGCCCGCAT TERM 3715 2866381 - 2866394 + T 75 -9.5 -3.48276 | opp_overlap 2866380 2866381 2866391 TATCGCCCGCATAAC GGCGC GAAA GCGCC TTGTCTGACCGGGCG SeD_A2976 2867499 - 2866462 - | RNA methyltransferase, TrmH family TERM 3716 2866938 - 2866960 + g 100 -10.6 -4.72272 | CCTGCTTTACCCATT GCTTAACGGT CGT ACCGTTACGC TTTTTAATCAGGAAA TERM 3717 2867146 - 2867158 + g 80 -9.1 -4.11216 | opp_overlap 2867146 GCGGCTCTGAAATAA CGCCT GGC AGGCG TTTTCACCGTAGACG TERM 3718 2867158 - 2867146 - G 73 -9.1 -3.90744 | opp_overlap 2867146 GCGGCTCTGAAATAA CGCCT GGC AGGCG TTTTCACCGTAGACG TERM 3719 2867265 - 2867303 + g 93 -13.1 -4.00934 | gap 1 CTTTCTCAGGCGTTT CATCGCC-TGGCGCGCGG GACA CGGTGCGCCACGGCGAAG TTTCATGTTTACGGT TERM 3720 2867676 - 2867656 - H 87 -10.4 -4.13591 | opp_overlap 2867656 2867675 GTAACATTATAGAAA CATCCCGC GCGTA GCGGGACG TCTTCCGACGTATTC SeD_A2977 2867703 - 2868122 + | putative thioredoxin TERM 3721 2868129 - 2868149 + F 100 -14.7 -4.16943 | opp_overlap 2868124 2868125, overlap 2868123 GCGCTGTAAACGCCA CGGGGCGCA TCT TGTGCCCCG TTTTCACCTCTGCCA TERM 3722 2868334 - 2868355 + G 76 -2.9 -5.01497 | overlap 2868341 2868346 TGTGTGATACGTTAA CGCCTTCTC AGGC GAAAAGCCG TTTTTGTCTGGTCAT SeD_A2978 2868195 - 2868875 + | DTW domain protein TERM 3723 2869650 - 2869632 - g 81 -8 -4.25104 | TTCTGGTGATTAAAA GCGGCCGA AGC CCGGCAGC CCAGCGTTTACTTAA SeD_A2979 2868929 - 2871589 + | CoA binding domain/acetyltransferase domain protein TERM 3724 2871845 - 2871834 - g 71 -5.8 -4.3739 | opp_overlap 2871835, overlap 2871821 2871835 CACTGCTGGAGAAAA TCGC CAGC GCGA CGCAGCGTATTTGTA pssA 2871704 - 2873059 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 3725 2873066 - 2873082 + F 89 -9.4 -4.66938 | opp_overlap 2873065 ATCCTGTAATCGAAG CCCCGT CCTGT ACGGGG TTTTCTCTTAGGAGT SeD_A2981 2873104 - 2873427 + | hypothetical protein SeD_A2982 2874725 - 2873424 - | alpha-ketoglutarate permease TERM 3726 2874526 - 2874508 - G 90 -5.8 -5.14563 | opp_overlap 2874509, overlap 2874509 2874510 GGCCGCATTAAAAAA CCGGCGGC AAA GACGCCTG CCGTTTGCAAAAGCT TERM 3727 2874745 - 2874757 + r 72 -2.6 -5.08255 | overlap 2874734 TTCTCCTTGTTGCCA GGCT TAATC GGCC TTTTATTTTGGAGAT SeD_A2983 2875284 - 2874829 - | putative cytoplasmic protein TERM 3728 2875445 - 2875486 + r 95 -13.1 -3.76224 | opp_overlap 2875450 2875455, overlap 2875450 2875455 CCGGCAGAAACAGAC AAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTA TTTGATGCCTGGCAG TERM 3729 2875481 - 2875450 - R 100 -17.4 -5.1634 | opp_overlap 2875450 2875445 2875455, overlap 2875455 AGAAACAGACAAAAA CAAAAGGCCCTGTC TTCC GACAGGGCCCTTCG TTTTATTTGATGCCT TERM 3730 2875450 - 2875481 + r 100 -13 -4.9448 | opp_overlap 2875450 2875455, overlap 2875445 2875455 AGAAACAGACAAAAA CAAAAGGCCCTGTC TTCC GACAGGGCCCTTCG TTTTATTTGATGCCT TERM 3731 2875455 - 2875476 + r 93 -15.9 -2.91914 | opp_overlap 2875450 2875455, overlap 2875450 2875445 CAGACAAAAACAAAA GGCCCTGTC TTCC GACAGGGCC CTTCGTTTTATTTGA TERM 3732 2875476 - 2875455 - R 100 -15.9 -5.38839 | opp_overlap 2875455 2875450 2875445, overlap 2875450 CAGACAAAAACAAAA GGCCCTGTC TTCC GACAGGGCC CTTCGTTTTATTTGA TERM 3733 2878217 - 2878229 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3734 2878771 - 2878795 + r 71 -8 -3.93061 | gap 1, opp_overlap 2878769 2878777, overlap 2878773 2878774 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 3735 2878870 - 2878835 - R 77 -9.2 -4.00532 | opp_overlap 2878846 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA CTGATGGCAACGCCT TERM 3736 2880783 - 2880808 + r 72 -4.7 -4.65895 | gap 1, overlap 2880777 2880789 ACAGCTCACCGTCGC GAGGTG-GCGTA TAT TACGCTTTCCTC TTTTTGAGTCAAGCC TERM 3737 2880789 - 2880801 + r 73 -7.7 -4.13748 | overlap 2880777 2880783 CACCGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTTTGAG TERM 3738 2880845 - 2880861 + r 71 -8 -3.85698 | TTCGCTTTCCTCACA GGCTTC TTAAC GAAGCC TTTCTGACCCGGCGG TERM 3739 2881044 - 2881027 - R 100 -10.5 -4.96848 | opp_overlap 2881027 GTTTTTAGACAAAAA CGAGCCC GTCA GGGCCCG TTTTATTCAAATTTG TERM 3740 2881027 - 2881044 + r 84 -8.3 -4.6971 | opp_overlap 2881027 GTTTTTAGACAAAAA CGAGCCC GTCA GGGCCCG TTTTATTCAAATTTG clpB 2883637 - 2881064 - | chaperone protein clpB TERM 3741 2882833 - 2882813 - G 74 -7.5 -4.1552 | opp_overlap 2882813 CAGCTCGTCAATAAA CAGGATGAC GTT GCCTTCCTG TTTCGCCAGATCGTT SeD_A2990 2884498 - 2883767 - | conserved hypothetical protein TIGR00726 TERM 3742 2883971 - 2883953 - G 71 -4.5 -4.56597 | opp_overlap 2883953 CCCGTGCGGCAAAAA TGCGCTA TCGGC TTGCGCA TCTTTTGCTAAAAAT TERM 3743 2883996 - 2883986 - G 78 -6.8 -4.56775 | ATCTTTTGCTAAAAA TGCG TCA CGCA CTTCCGGCCCCACTT rluD 2885475 - 2884495 - | ribosomal large subunit pseudouridine synthase D TERM 3744 2884550 - 2884532 - G 70 -6.6 -4.12188 | opp_overlap 2884549 TTATGATCTTCAAAA TCGGCGCG CAT CGCATCGA TAAGGTCCACCATAT TERM 3745 2885507 - 2885517 + H 74 -8.2 -3.8766 | TAACGTTGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC SeD_A2992 2885607 - 2886344 + | outer membrane assembly lipoprotein YfiO TERM 3746 2886389 - 2886360 - f 93 -15.1 -2.8917 | opp_overlap 2886365, overlap 2886365 AGCAATACCAACAAG CAAAACGGCAGCC TTCC GGCTGCCGTTTTT TTATTCGATATCTGA TERM 3747 2886384 - 2886365 - f 100 -15 -4.5774 | opp_overlap 2886365, overlap 2886360 TACCAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGATA TERM 3748 2886365 - 2886384 + F 100 -15 -5.8187 | opp_overlap 2886360 2886365 TACCAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGATA TERM 3749 2886552 - 2886537 - f 72 -6.2 -4.35693 | opp_overlap 2886536 AAAGTGACAAAATAA TGTGAT TTAC ATCACA CATTTTGACATTAAG SeD_A2993 2886616 - 2886954 + | ribosomal subunit interface protein TERM 3750 2886980 - 2886995 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGG TERM 3751 2887154 - 2887174 + F 100 -14 -5.5112 | opp_overlap 2887154 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3752 2887174 - 2887154 - f 100 -14 -4.03167 | opp_overlap 2887154 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3753 2887951 - 2887925 - g 71 -4.3 -4.67353 | overlap 2887927 2887939 2887940 GCAGCGATGGAAAAA GTCGCGCAG GCAAACTCT CCGCGCGTC GCGGCGCTCGGCAGC SeD_A2994 2887205 - 2888365 + | P-protein SeD_A2995 2889234 - 2888326 - | SMP-30/Gluconolaconase/LRE domain protein TERM 3754 2888535 - 2888551 + g 76 -12.3 -3.0497 | opp_overlap 2888534 2888535 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3755 2888551 - 2888535 - G 72 -12.3 -2.57564 | opp_overlap 2888535, overlap 2888534 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3756 2888592 - 2888582 - G 71 -8.2 -3.85698 | overlap 2888583 CCTTGCGGTGAGAAA CGCG CCA CGCG CCAGCCGTCAAACAT TERM 3757 2889060 - 2889037 - G 77 -7.4 -4.31433 | overlap 2889039 CATGGCCACAATAAA TCCGCCCTGC TCAC GCAAGGCAAA ACAGCCCACCTCTTC TERM 3758 2889271 - 2889257 - R 100 -11.4 -5.37593 | opp_overlap 2889257 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT TERM 3759 2889257 - 2889271 + r 91 -11.4 -4.36262 | opp_overlap 2889257 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT tyrA 2890413 - 2889292 - | T-protein aroF 2891493 - 2890423 - | 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive TERM 3760 2891182 - 2891200 + g 77 -8.1 -4.11216 | gap 1 AATCAGCCCTTTCCA GCCGACGG TAGT CCG-CGGC TTTTCAAAATAGACG TERM 3761 2891347 - 2891329 - G 71 -10.2 -3.24925 | ACCGCATACCACCAA CAGACGCG GAT CGCGCCCG GCAATAATGTCAGAA SeD_A2998 2891781 - 2891668 - | hypothetical protein TERM 3762 2891702 - 2891717 + g 86 -4 -5.43514 | gap 1, opp_overlap 2891702 2891703 2891705, overlap 2891705 AGAAAAACGGTAAAA TGAGCGA TGC TCGC-CA TTTTTTGATTATTTT SeD_A2999 2891933 - 2892451 + | putative periplasmic protein SeD_A3000 2892525 - 2893664 + | inner membrane protein YfiN TERM 3763 2893789 - 2893751 - T 73 -11.1 -2.67803 | opp_overlap 2893756 2893759, overlap 2893759 CGTGGAGCAAACCCA TAAAAAAAGGGGCCAGC GTAAT GCCAGCCCCTTCTTTTC TACAAGCTTTCGGAT TERM 3764 2893756 - 2893784 + T 70 -5.1 -4.39002 | opp_overlap 2893751 2893759, overlap 2893759 AGCAAACCCATAAAA AAAGGGGCCAGCG TAA TGCCAGCCCCTTC TTTTCTACAAGCTTT TERM 3765 2893781 - 2893759 - T 100 -10.5 -5.68039 | opp_overlap 2893756 2893759, overlap 2893751 AAACCCATAAAAAAA GGGGCCAGC GTAAT GCCAGCCCC TTCTTTTCTACAAGC TERM 3766 2893759 - 2893781 + T 74 -6.8 -4.30995 | opp_overlap 2893759 2893751, overlap 2893756 AAACCCATAAAAAAA GGGGCCAGCG TAA TGCCAGCCCC TTCTTTTCTACAAGC rplS 2894169 - 2893822 - | ribosomal protein L19 trmD 2894977 - 2894210 - | tRNA (guanine-N1)-methyltransferase rimM 2895573 - 2895022 - | 16S rRNA processing protein RimM rpsP 2895837 - 2895589 - | ribosomal protein S16 TERM 3767 2895893 - 2895861 - R 84 -8.4 -4.63218 | gap 1, overlap 2895864 CTTGTGTGAATAAAA CAACCGGGCCCCATC GAGG AACGGAGCCCGGC-G TCATATTAAAAGCCC TERM 3768 2895891 - 2895864 - R 100 -13.4 -4.43307 | overlap 2895861 GTGTGAATAAAACAA CCGGGCCCCATC GAGG AACGGAGCCCGG CGTCATATTAAAAGC ffh 2897451 - 2896090 - | signal recognition particle protein TERM 3769 2898600 - 2898590 - g 75 -4 -4.86033 | AAACGGGTAGAAAAA TTAC TGC GTAA ACCCGGCCGACTGAT TERM 3770 2899493 - 2899462 - g 74 -7.2 -4.09685 | overlap 2899463 2899465 GGTCACGCCGCAAAA CGACGGTTCGGTCA TTAT TGACGGTACCGCCA ACGTCCGGGAAATCA SeD_A3007 2898473 - 2899714 + | CBS/transporter associated domain protein TERM 3771 2899738 - 2899721 - f 74 -11.3 -2.82449 | opp_overlap 2899721, overlap 2899720 GCGGAGTAACACAAT GGCGAAC TCCG GTTCGCC TTTTTTATCGCCGTC TERM 3772 2899721 - 2899738 + F 100 -11.3 -5.252 | opp_overlap 2899721 2899720 GCGGAGTAACACAAT GGCGAAC TCCG GTTCGCC TTTTTTATCGCCGTC SeD_A3008 2899799 - 2900440 + | hypothetical protein TERM 3773 2900466 - 2900446 - Tf 100 -9 -5.53288 | TTTAAGCTAAAAAAA TGGCCGAC TTTAC ATCGGCCA TCAGACTTTTACTTC grpE 2901227 - 2900475 - | co-chaperone GrpE TERM 3774 2900893 - 2900935 + gF 79 -2.7 -5.14563 | gap 1, overlap 2900895 AACACGGTGTCGCGT TCGCGAGTCTGG-GCTTCTG CAAG CTGAACTTCCAGATTCGCAA TTTTTTCATCGCGCG TERM 3775 2901031 - 2901043 + gF 72 -2.6 -4.84673 | overlap 2901020 ATTTCTTCCGGGGCT TGCC CCTCA GGCG TTTTCTGTTCTTTAC TERM 3776 2901356 - 2901341 - gH 80 -4.6 -5.13473 | overlap 2901342 ATTACAGCTAAAAAA TGTGCC AACC GGCACG CTGGCGGAAATTGGT TERM 3777 2901355 - 2901342 - gH 72 -8.1 -3.66999 | overlap 2901341 TTACAGCTAAAAAAT GTGCC AACC GGCAC GCTGGCGGAAATTGG ppnK 2901189 - 2902067 + | NAD(+) kinase TERM 3778 2902711 - 2902699 - g 71 -10.5 -3.27617 | CAACAAAGCCAGGAA CGCGC CGC GCGCG CAGAACTGCTGCAAT TERM 3779 2903093 - 2903078 - g 79 -7.6 -4.42806 | GCATCGCTAAACAAA TTTCGC TGGC GCGAAA ACATCACGTCAGCCC recN 2902153 - 2903814 + | DNA repair protein RecN SeD_A3012 2903963 - 2904301 + | small protein A SeD_A3013 2904757 - 2904467 - | protein YfjF TERM 3780 2904590 - 2904601 + g 77 -4.4 -4.85782 | TTTTACCGGACGACT GTAG ATAC CTAC TTTATTTTTCGCCAG SeD_A3014 2905223 - 2904747 - | polyketide cyclase/dehydrase family protein smpB 2905328 - 2905855 + | SsrA-binding protein TERM 3781 2905868 - 2905898 + T 71 -9.8 -3.23492 | overlap 2905866 2905869 TAATAGACATTTTTT GTGACCAGCTTC TCAGTAT GAAGCTGGTCAA TGTTCATATCTCATG TERM 3782 2905869 - 2905897 + T 80 -13.3 -2.53613 | overlap 2905868 2905866 AATAGACATTTTTTG TGACCAGCTTC TCAGTAT GAAGCTGGTCA ATGTTCATATCTCAT SeD_A3016 2906154 - 2906002 - | hypothetical protein TERM 3783 2906056 - 2906078 + g 77 -3.5 -5.0916 | opp_overlap 2906061, overlap 2906059 AAATTTAATATTGCT GAATACCTT CACAA AAGGTATTG TTTTTATGTTAAAAA TERM 3784 2906059 - 2906075 + g 73 -5.2 -4.63863 | opp_overlap 2906061, overlap 2906056 TTTAATATTGCTGAA TACCTT CACAA AAGGTA TTGTTTTTATGTTAA TERM 3785 2906847 - 2906880 + G 72 -11 -3.01712 | overlap 2906859 GTGGGTACTGGCTGG CGCGGTGGCGGC TGGCGGCATT GCCGCTATCGCG TCTTCCGGCGGCGGC TERM 3786 2908246 - 2908236 - g 78 -6.8 -4.56597 | CGGGCTGCTGAAAAA TGGC GAT GCCA CAGATGATAACCGCC TERM 3787 2908752 - 2908736 - g 71 -5.7 -4.37092 | overlap 2908738 ACGCGCCGGATAAAA CTGCGCC TGC GGCACCG GACGGTCTTACCGTG TERM 3788 2909444 - 2909406 - g 74 -11 -3.27774 | opp_overlap 2909413, overlap 2909436 CACGCCAACGATTAA TGGTACAGGTGAACCGGG TTC CACAGTACACCTGTATCA GAATGGCGCCCGGAT TERM 3789 2910178 - 2910153 - g 74 -10.5 -3.61268 | gap 1, overlap 2910156 GAGCGAAGGGTTAAA CATCC-TGACGG CCA CCGCCACGGATG CCGCAGGCAATAGTA TERM 3790 2912323 - 2912309 - g 76 -12.8 -2.73875 | overlap 2912306 CGGCGGGCAATACCA GCGCGG TCT CCGCGC CGTGGACGATCGTGG TERM 3791 2915614 - 2915586 - g 87 -13.2 -3.21416 | gap 1 CACCGCCATCACCAA CGCCAA-CGGCGT CAGT ACGCCGGTCGGCG CGGGCGGCGTGGATA TERM 3792 2916460 - 2916447 - g 74 -9.5 -3.64487 | CTACACGCTGAAGAA CGGCG TCGG CGCCG ACAGCATTAAAACGC TERM 3793 2917363 - 2917350 - g 75 -6.7 -4.46615 | CAGTACCAACCAAAA CGATG TTCT CATCG GCTCCGCCTATGGCG SeD_A3017 2906470 - 2917689 + | VCBS repeat-containing protein TERM 3794 2917722 - 2917697 - f 100 -16.9 -5.24129 | GCGGTTGATAAAAAA GCCCCGAACGC CACG ACGTTCGGGGC AACAAGCGGTGATAT SeD_A3018 2917754 - 2919163 + | type I secretion outer membrane protein, TolC family TERM 3795 2920156 - 2920136 - f 100 -7.5 -5.78622 | GCACTGCAAAAAAAA CTGGCTGTC CTC GCCAACCAG GCCGCCCACGAAGCG TERM 3796 2920235 - 2920246 + F 71 -7.2 -4.16016 | opp_overlap 2920226 2920243 ATTAAACTGATGCAG GCGG AGAA CCGC TTTCTTCAGCAGTGG TERM 3797 2921112 - 2921096 - f 71 -10.1 -3.16564 | GTGCTACTTGATGAA CCCAGCG CCT CGCTGGA CGAGCATACGGAACG SeD_A3021 2921316 - 2922506 + | type I secretion membrane fusion protein, HlyD family TERM 3798 2922678 - 2922663 - f 79 -3.2 -5.4477 | overlap 2922665 AAAGCCGCAAAAAAA TAGTCG CAAA CGACGA AACCTACGCTTTAGC TERM 3799 2922977 - 2922948 - f 100 -9.3 -4.93877 | opp_overlap 2922951, overlap 2922951 CTCCACCAAATAAAA CAAGGGGTTACGT GAAA ACGTAGCCCCTTT TTCTTTGGTAGTGGC TERM 3800 2922974 - 2922951 - f 95 -11 -4.56436 | opp_overlap 2922951, overlap 2922948 CACCAAATAAAACAA GGGGTTACGT GAAA ACGTAGCCCC TTTTTCTTTGGTAGT TERM 3801 2922951 - 2922974 + F 100 -13.2 -5.34309 | opp_overlap 2922951 2922948 CACCAAATAAAACAA GGGGTTACGT GAAA ACGTAGCCCC TTTTTCTTTGGTAGT TERM 3802 2923035 - 2923051 + G 78 -6.5 -4.63486 | opp_overlap 2923035 GGCGGCAACAAAAAA CCCGC CATTAAA GCGGG TTTTGTTCAGAAACT TERM 3803 2923051 - 2923035 - g 100 -7.2 -5.4505 | opp_overlap 2923035 GGCGGCAACAAAAAA CCCGCC ATTAA AGCGGG TTTTGTTCAGAAACT SeD_A3024 2922988 - 2923131 + | hypothetical protein SeD_A3025 2924445 - 2923345 - | phage late control D family protein TERM 3804 2923553 - 2923571 + g 70 -3 -4.7254 | opp_overlap 2923546 2923541 GAAGCAACCCCGCGC TGCAGGCG TTC CCACTGCA TTTTTGCTGCGCGCT TERM 3805 2923840 - 2923862 + g 79 -11.3 -3.7104 | gap 1, opp_overlap 2923840 2923839 CGTGATGGTGATAAC CGGC-AGCGG CTTG CCGCTTGCCG TTCTTCCCTGTCCCT TERM 3806 2924200 - 2924190 - G 71 -4.6 -4.62783 | CATCTACGGTAAAAA CCCC TTT AGGG AAAAGCGGCTGGCCT SeD_A3026 2924927 - 2924442 - | phage P2 GpU family protein SeD_A3027 2927731 - 2924924 - | phage tail tape measure protein TERM 3807 2927413 - 2927423 + g 80 -4.6 -5.1101 | ATTTGCTCTGTAACT CCGT AAC GCGG TTTTTTGCCTGCTCA TERM 3808 2927704 - 2927717 + g 71 -8.1 -3.82824 | opp_overlap 2927704 2927701 CCGCATTAAGAATCA CCTGC AGAC GCAGG TTATTGTCACTCATC SeD_A3029 2928160 - 2927858 - | phage tail protein E TERM 3809 2928207 - 2928182 - R 77 -8.9 -3.90112 | overlap 2928184 2928185 TTCCTGTTAATGAAA TACTGGCGCGG CTGC CCGCGCCGTTA AGGTTAATCAGAGGC TERM 3810 2928204 - 2928184 - R 79 -10.4 -3.54146 | gap 1, overlap 2928182 2928185 CCTGTTAATGAAATA CTGGCGCGG CTGC CCGCGCC-G TTAAGGTTAATCAGA TERM 3811 2928204 - 2928185 - R 71 -10.6 -2.72166 | overlap 2928184 2928182 CTGTTAATGAAATAC TGGCGCGG CTGC CCGCGCCG TTAAGGTTAATCAGA SeD_A3030 2928730 - 2928215 - | phage major tail tube protein FII SeD_A3031 2929912 - 2928740 - | major tail sheath protein TERM 3812 2930038 - 2930019 - R 85 -7 -4.91712 | overlap 2930009 2930021 TGGAAGGGATAAAAA GACCCCGC TAAC GCAGGGAC GGAGTTACTTTTTCG TERM 3813 2930036 - 2930021 - R 76 -8.2 -4.07789 | overlap 2930009 2930019 GAAGGGATAAAAAGA CCCCGC TAAC GCAGGG ACGGAGTTACTTTTT SeD_A3032 2930570 - 2930043 - | putative phage tail fiber assembly protein SeD_A3033 2932258 - 2930573 - | tail fiber domain protein SeD_A3034 2932860 - 2932255 - | phage tail protein I TERM 3814 2932597 - 2932616 + g 73 -10.6 -3.38559 | opp_overlap 2932582, overlap 2932589 GCCGAACGGCTCCAC CACGCGCC GCAC GGCGCGGG TTGTCCCCTTGTGCT TERM 3815 2932673 - 2932646 - G 80 -4.7 -4.99035 | opp_overlap 2932665 TGATGGATATAAAAA GCGTCCTGCAC AACGCG GCGCTTGACGC TTTCTGTCCAGCTCT SeD_A3035 2933761 - 2932853 - | baseplate assembly protein J TERM 3816 2933377 - 2933399 + g 72 -12 -2.76171 | opp_overlap 2933370, overlap 2933375 CCTCAAATGCTGCAG GGATGCGCTG GCG CAGCGCATCA TCATCTTCCATCACT SeD_A3036 2934107 - 2933748 - | baseplate assembly protein W SeD_A3037 2934682 - 2934104 - | phage baseplate assembly protein V TERM 3817 2934940 - 2934961 + G 76 -2.9 -4.98531 | opp_overlap 2934940 2934942, overlap 2934943 CCAAACTCGAATAAC TACGCCGCT CAAC AGCAGCTTA TTTTTGATTTACAAG TERM 3818 2934943 - 2934958 + G 71 -4.6 -4.58698 | opp_overlap 2934942 2934940, overlap 2934940 AACTCGAATAACTAC GCCGCT CAAC AGCAGC TTATTTTTGATTTAC SeD_A3038 2934778 - 2935644 + | hypothetical protein SeD_A3039 2936117 - 2935671 - | phage virion morphogenesis protein TERM 3819 2935829 - 2935880 + g 93 -13.3 -3.78775 | gap 1, opp_overlap 2935839 CAATGCGCTGCACCT TACCTTCAAACTGCACGCTGGC AGAATTGGC GCTGGCG-GTAGTTTGAAGGTA TTTGGTGGTGCGCAG gpR 2936541 - 2936110 - | phage tail completion protein R SeD_A3041 2937065 - 2936637 - | phage lysis timing protein LysB SeD_A3042 2937439 - 2937062 - | hypothetical protein SeD_A3043 2937953 - 2937441 - | phage lysozyme SeD_A3044 2938149 - 2937934 - | holin family protein SeD_A3045 2938356 - 2938153 - | phage Tail Protein X SeD_A3046 2938820 - 2938356 - | phage head completion protein TERM 3820 2938886 - 2938910 + r 93 -13.6 -3.48593 | gap 1 TGCCTTTCGCCACCC CGTGCCGCCCG TGCG CGGG-GGCACG TTCTGTCAGCGGCTG SeD_A3047 2939566 - 2938916 - | terminase, endonuclease subunit SeD_A3048 2940628 - 2939570 - | phage major capsid protein, P2 family SeD_A3049 2941478 - 2940645 - | phage capsid scaffolding protein TERM 3821 2940890 - 2940908 + g 79 -3.1 -5.14563 | gap 1 GCATATCAGAGAACC GGGC-GTC ATCG GACTGCTC TTTTTTGGTAAACAG TERM 3822 2942114 - 2942136 + G 71 -4.7 -4.55128 | opp_overlap 2942119, overlap 2942115 TCCGCAACCTGCTGA AGTCACGCC AGATC GGCGCGACC TTTTACTTTGCCCGT TERM 3823 2942169 - 2942191 + G 85 -4.9 -5.27335 | AGCCCTGATTGACGC TCTGCTTAC CGGAC GTAACCAGA TTTTTCTTTCCGCCA TERM 3824 2942893 - 2942880 - g 86 -9.5 -4.22948 | AAAAGGTACGCAAAA CGGCG ACAG CGCCG GGTGCGTGGTGGTGG SeD_A3050 2941621 - 2943387 + | terminase, ATPase subunit TERM 3825 2943417 - 2943407 - g 100 -8.2 -5.20606 | overlap 2943408 AAAGAGTAAGAAAAA CCGC GCT GCGG CGACGAATCAGCTCA TERM 3826 2944247 - 2944225 - g 78 -13.4 -2.66316 | overlap 2944222 GCCGGGACGACATGA TGGCGGCACA CCG TGTGCCGCCG CAAATGATGGGGATA SeD_A3051 2943387 - 2944418 + | phage portal protein, pbsx family SeD_A3052 2945194 - 2944415 - | hypothetical protein SeD_A3053 2946359 - 2945199 - | hypothetical protein TERM 3827 2946539 - 2946520 - H 79 -11.4 -3.37056 | ATGATCTACGCAGAA GCCCACCA ATTC TGGCGGGC CTTAGCAAAAACGAT TERM 3828 2946800 - 2946827 + G 70 -5 -4.46233 | gap 1, opp_overlap 2946808, overlap 2946803 2946805 2946808 TACGGGTTTGTCATG CCAGA-TAATCCT GTT AGGATTAGTCTTG TTTGTTTACGATTGG TERM 3829 2947260 - 2947249 - g 76 -3 -5.05782 | overlap 2947250 AGGCAGCTGAAAAAA TGAA AGCC TTCA AGGTCGAACGCTCCC SeD_A3054 2946780 - 2947658 + | putative lipoprotein SeD_A3055 2947915 - 2947796 - | hypothetical protein TERM 3830 2948085 - 2948099 + r 79 -8.5 -4.3208 | opp_overlap 2948085 TCGACGTATGTGAAA GGGGC CTTAT GCCCC TTTTGGATTATCCAA SeD_A3056 2948325 - 2948137 - | hypothetical protein SeD_A3057 2950877 - 2948481 - | bacteriophage replication gene A TERM 3831 2949765 - 2949752 - G 73 -5.9 -4.37886 | opp_overlap 2949753 2949754, overlap 2949753 2949754 TGATGGTGTAGAAAA CGGCG CAGT CACCG CGCATTTCCGCGATA TERM 3832 2950778 - 2950760 - G 83 -10.2 -3.95219 | overlap 2950751 TTGAAAGCGCAGAAA CCGGCGCA ACT TCCGCCGG GTCCAGATAAGGGTT TERM 3833 2950826 - 2950854 + g 86 -12.4 -3.7732 | opp_overlap 2950825 2950824 TGTTCCATGAGAATG CTGCGGCGGCCT CGTTA AAGCCGCTGCAG TTGTTCATATCAGCA SeD_A3058 2951731 - 2950874 - | retron EC67 DNA adenine methylase TERM 3834 2951390 - 2951376 - G 74 -7.8 -4.07868 | overlap 2951377 TTATAGCGACATAAA CCACGG TAA CCGTGA CGATTGAGATACAGG TERM 3835 2951657 - 2951631 - G 80 -12.2 -3.31537 | ATCACAGCACAGGAA CCCGCGAAAGGT TCA ACCAGTCGCGGG CCAGCAGGAAGATGT SeD_A3059 2951955 - 2951728 - | C4-type zinc finger protein, DksA/TraR family SeD_A3060 2952188 - 2951955 - | hypothetical protein SeD_A3061 2952597 - 2952256 - | hypothetical protein SeD_A3062 2952910 - 2953275 + | hypothetical protein SeD_A3064 2954249 - 2954010 - | phage regulatory protein TERM 3836 2954642 - 2954632 - g 70 -3.2 -4.7339 | overlap 2954639 AAGAAATCTCAAAAA CGAA ACC TCCG TCACGGTAAGACCAC SeD_A3065 2954594 - 2954998 + | phage repressor protein cI SeD_A3066 2955002 - 2956027 + | phage integrase TERM 3837 2956229 - 2956194 - f 82 -12 -3.45324 | opp_overlap 2956200, overlap 2956200 CAGCTCCACCAAATA TAACAAGGGGTTACGT GAAA ACGTAGCCCCTTTTTA ATGTCCAGTGTCCAC TERM 3838 2956200 - 2956223 + F 100 -13.2 -4.80882 | opp_overlap 2956194 2956200 CACCAAATATAACAA GGGGTTACGT GAAA ACGTAGCCCC TTTTTAATGTCCAGT TERM 3839 2956223 - 2956200 - f 89 -11 -4.05193 | opp_overlap 2956200, overlap 2956194 CACCAAATATAACAA GGGGTTACGT GAAA ACGTAGCCCC TTTTTAATGTCCAGT TERM 3840 2956610 - 2956581 - f 70 -4.9 -4.50353 | AAATTAAGAAAAGAA CTCGCCCGCAAAC AAGA GATTGAGAGCAAG GAAATCAAGAGAATC TERM 3841 2956916 - 2956872 - f 81 -12.5 -3.25073 | overlap 2956853 2956851 2956870 GCCGCAACAGCAACA GACTC-CTAGCTTTGCATAGC TGCCC GCTATGCAAA-CTAGTGAGCC AAATAAATTTAGACT SeD_A3067 2957279 - 2958082 + | hypothetical protein TERM 3842 2958630 - 2958601 - T 100 -10.7 -4.93877 | opp_overlap 2958604, overlap 2958604 CGCCAGCAAATAAAA CAAGGGGCAACGT GAAA ACGTAGCCCCTTT TTGTTGTCTATGGAA TERM 3843 2958604 - 2958627 + T 100 -12.4 -5.27206 | opp_overlap 2958601 2958604 CAGCAAATAAAACAA GGGGCAACGT GAAA ACGTAGCCCC TTTTTGTTGTCTATG TERM 3844 2958627 - 2958604 - T 100 -12.4 -4.56436 | opp_overlap 2958604, overlap 2958601 CAGCAAATAAAACAA GGGGCAACGT GAAA ACGTAGCCCC TTTTTGTTGTCTATG TERM 3845 2958666 - 2958648 - T 100 -16 -4.18018 | opp_overlap 2958638 GTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC SeD_A3068 2959501 - 2958878 - | transposase B SeD_A3069 2959989 - 2959723 - | transposase family protein SeD_A3070 2960332 - 2960448 + | transposase for insertion sequence element TERM 3846 2960527 - 2960551 + F 90 -9.9 -4.4458 | opp_overlap 2960530, overlap 2960529 2960530 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGTCTATGTC TERM 3847 2960529 - 2960549 + F 93 -12.5 -3.8147 | opp_overlap 2960530, overlap 2960527 2960530 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGTCTATG TERM 3848 2960548 - 2960530 - f 100 -16 -4.91109 | opp_overlap 2960530 2960529 2960527 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTCTAT TERM 3849 2960530 - 2960548 + F 93 -16 -2.87798 | opp_overlap 2960530, overlap 2960529 2960527 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTCTAT TERM 3850 2960969 - 2960959 - f 86 -4 -5.52384 | opp_overlap 2960968 TTTTTATGAAAAAAA TCAT CAC ATGA TCAAGGGTCGTATTT SeD_A3071 2961074 - 2962189 + | IroB SeD_A3072 2962270 - 2965926 + | ATP binding cassette TERM 3851 2965965 - 2965987 + F 95 -13.5 -3.77831 | opp_overlap 2965957 2965959 2965958 AAAGAAAGCCCGCAA GCGGCTGTT CCTGT AACAGCCGC TTTAGCTATTAGTAC SeD_A3073 2966036 - 2967280 + | enterochelin esterase TERM 3852 2967342 - 2967356 + G 74 -4.2 -4.79667 | overlap 2967338 2967352 TACCACAACAAGTGC TATCGC ATG GCGCTA TTTTTAGTGAGTTTT TERM 3853 2968148 - 2968166 + G 74 -10.2 -3.58731 | overlap 2968150 GCAGCATTACCCGGG CCTGGGCC ACG GGCCCATG TTTAACGCCTCTTTT TERM 3854 2968150 - 2968164 + G 75 -11.4 -3.36341 | overlap 2968148 AGCATTACCCGGGCC TGGGCC ACG GGCCCA TGTTTAACGCCTCTT SeD_A3074 2967312 - 2968241 + | IroE TERM 3855 2968277 - 2968255 - T 86 -14.2 -3.29043 | overlap 2968242 AACCCGCCGCCAGAA TATGCCCGCC AGC GACGGGCATA ATCCATCAAAACGAG SeD_A3075 2970457 - 2968283 - | TonB dependent outer membrane siderophore receptor protein TERM 3856 2968501 - 2968516 + g 74 -3.2 -4.87291 | overlap 2968494 CTTCACTACGCGACT CCGC ATGTGTTC GCGG TTTTTGCTTGCCGTA TERM 3857 2970976 - 2970940 - R 100 -17.5 -4.07687 | opp_overlap 2970946, overlap 2970942 2970946 ATGTTGGCGCCAAAA TACAAAGCGCCTGGTAA TAT TTATCAGGCGCTTTGCA GACAGAAAACCATCA TERM 3858 2970974 - 2970942 - R 100 -17.9 -3.63744 | opp_overlap 2970946, overlap 2970940 2970946 GTTGGCGCCAAAATA CAAAGCGCCTGGTAA TAT TTATCAGGCGCTTTG CAGACAGAAAACCAT TERM 3859 2970970 - 2970946 - R 100 -12.9 -4.45168 | opp_overlap 2970946, overlap 2970942 2970940 GCGCCAAAATACAAA GCGCCTGGTAA TAT TTATCAGGCGC TTTGCAGACAGAAAA TERM 3860 2970946 - 2970970 + r 100 -15.1 -3.53012 | opp_overlap 2970942 2970940 2970946 GCGCCAAAATACAAA GCGCCTGGTAA TAT TTATCAGGCGC TTTGCAGACAGAAAA TERM 3861 2971427 - 2971448 + r 71 -7.3 -4.10566 | opp_overlap 2971424, overlap 2971442 GTAAATAATTTACTC TCAGCTACT ATTC AGTAGCAGA TTGTTATTCTTACAT SeD_A3077 2972595 - 2971495 - | effector protein pipB2 TERM 3862 2972295 - 2972311 + g 71 -5.9 -4.36914 | overlap 2972297 CACGACACCCATCCA TATCATC CAG GATGATG TTTTCTGGCAACGGA TERM 3863 2973423 - 2973404 - g 77 -3.5 -5.13016 | overlap 2973406 AAGTAAAATTAAAAA GATCCTC CTGTCC GAGGAAC AAATCTTGCTCGCTC SeD_A3078 2973066 - 2973995 + | hypothetical protein SeD_A3079 2974095 - 2974292 + | hypothetical protein TERM 3864 2975024 - 2975008 - g 72 -2.3 -4.8622 | TGGTGCAATTAAAAA TGAGT TCAGACC ACTCA GTCCCGGCAGCATAC SeD_A3080 2974289 - 2975185 + | Mig-14 TERM 3865 2975225 - 2975193 - f 88 -8.5 -4.85782 | opp_overlap 2975194 2975195, overlap 2975194 2975195 TTTGCTAAAAAGAAA GCCTGGACGTAAATA TGT TTTTTACGTCCAGAT TTTTCATAAGTCCTG TERM 3866 2975224 - 2975194 - f 86 -12 -3.50746 | opp_overlap 2975194 2975195, overlap 2975193 2975195 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGTCCAGA TTTTTCATAAGTCCT TERM 3867 2975194 - 2975224 + F 100 -9.8 -4.75372 | opp_overlap 2975193 2975194 2975195, overlap 2975195 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGTCCAGA TTTTTCATAAGTCCT TERM 3868 2975223 - 2975195 - f 81 -13.3 -2.69725 | opp_overlap 2975195 2975194, overlap 2975194 2975193 TGCTAAAAAGAAAGC CTGGACGTAAATA TGT TTTTTACGTCCAG ATTTTTCATAAGTCC TERM 3869 2975195 - 2975223 + F 86 -13.3 -3.445 | opp_overlap 2975194 2975193 2975195, overlap 2975194 TGCTAAAAAGAAAGC CTGGACGTAAATA TGT TTTTTACGTCCAG ATTTTTCATAAGTCC SeD_A3081 2975701 - 2975814 + | putative inner membrane protein hoxN 2976920 - 2975907 - | high-affinity nickel transport protein TERM 3870 2976560 - 2976550 - G 87 -2.4 -5.67063 | GCCAGCAGAAAAAAA GCGG AAA CAGC CGTACCAATCAACGA TERM 3871 2976700 - 2976681 - G 93 -4.2 -5.64006 | opp_overlap 2976689 ACCCAATGAAAAAAA CGCCCCCA CGCC TAAAGGCG TTTTACCCTGCTGCA TERM 3872 2976689 - 2976700 + g 74 -7.2 -4.15565 | opp_overlap 2976681 AAAAAAACGCCCCCA CGCC TAAA GGCG TTTTACCCTGCTGCA SeD_A3083 2978468 - 2977053 - | tricarboxylic transport: regulatory protein TERM 3873 2977680 - 2977690 + g 90 -8.2 -4.68593 | opp_overlap 2977679, overlap 2977658 2977660 CTGCGTTTTTAACAC CGCC AGC GGCG TTTTTAACTGGTGAG SeD_A3084 2979129 - 2978455 - | transcriptional regulatory protein TctD TERM 3874 2978522 - 2978532 + g 76 -3.2 -5.02074 | GTAATTCGTACATCG CTTC CCT GGAG TTTTTTACGCAGTCG TERM 3875 2979051 - 2979061 + g 77 -8.2 -4.07687 | CAAATACGCAGTCCA CGGC AAA GCCG TTTTGCACCAGCGCT TERM 3876 2980159 - 2980141 - g 83 -7.3 -4.63527 | opp_overlap 2980141 2980140 CGACGAGTTTAAAAA GCAGCGC GATCT GCGCGGC CTGTTTGAGTTCGAC SeD_A3085 2979284 - 2980261 + | tricarboxylic transport SeD_A3086 2980276 - 2980707 + | tricarboxylic transport SeD_A3087 2980718 - 2982232 + | integral membrane protein SeD_A3088 2982396 - 2982509 + | hypothetical protein TERM 3877 2984168 - 2984184 + G 91 -7.2 -4.84311 | CGGCTGGTCAAAATG CTGGGC GTGGA GCCCGG TTTTATTATCTGCCC TERM 3878 2984277 - 2984287 + G 71 -8.2 -3.87994 | ACCCGATCCCCGATC CGGC AAT GCCG TTTCTCGGCGTCCAT SeD_A3091 2983538 - 2984806 + | putative FAD dependent oxidoreductase TERM 3879 2985025 - 2984992 - g 71 -10.9 -3.16564 | gap 1 GCGCGACGCCATCAA CGC-CGCCAATCGCGC CCT GCCCGCCTGGCGCGCG CTCACCGCCAAAGAG SeD_A3092 2984828 - 2986276 + | succinate-semialdehyde dehydrogenase (NADP+)) TERM 3880 2986666 - 2986652 - f 71 -7.1 -4.10855 | overlap 2986641 AAAACGCGGTGAAAA TCGCC CGCGC GGCGA CAAAACGCAGCGGCG TERM 3881 2987626 - 2987575 - f 85 -14 -3.05384 | opp_overlap 2987568 CGGGTGGCGACGTAA CTGTCTTATCCGGCCTACAA AAACCGTTTCGA TTGTAGGCCGAATAAGCCAG GCGCCATCCGGTAAA TERM 3882 2988173 - 2988198 + G 74 -3.1 -4.89852 | overlap 2988174 ATTCTGGCGTTTATC GCGCTGGGCGC GACG GCGATTAGCGG TTTTTATCCGTATGC gabP 2987672 - 2989072 + | gaba permease TERM 3883 2989597 - 2989611 + G 71 -4.2 -4.57304 | CGCTTATTTGACCTG GCGG CCCGCTA CCGC TTTATTTGGTTACGT TERM 3884 2989751 - 2989730 - g 70 -10.1 -3.37344 | opp_overlap 2989729 2989728, overlap 2989731 GCGCCAGCGAATTAA TGCGTCAGC ATTT GCTGACGCC GATTTCCATTATTCG TERM 3885 2989750 - 2989731 - g 78 -13.6 -2.62192 | opp_overlap 2989729 2989728, overlap 2989730 CGCCAGCGAATTAAT GCGTCAGC ATTT GCTGACGC CGATTTCCATTATTC SeD_A3096 2989114 - 2989791 + | transcriptional regulator, GntR family SeD_A3097 2990262 - 2989813 - | peptidoglycan-binding LysM TERM 3886 2989982 - 2989972 - G 70 -5.4 -4.4009 | overlap 2989974 TTTTACGGTATAAAA CTGA CTT TCAG CCGCTGGCGTCGTGG TERM 3887 2990139 - 2990150 + g 91 -7.2 -4.93288 | TCACTTTATCAGCGT CGGG TATT CCCG TTTTATTTAAATGTT TERM 3888 2990348 - 2990331 - R 90 -14.1 -3.31263 | AGGTTATCCTGATAA GCGGCGC TTAT GCGCCGC CGGTGGCCGGTAATT SeD_A3098 2990520 - 2990362 - | hypothetical protein TERM 3889 2990572 - 2990560 - H 78 -6.3 -4.58395 | GTCATTGTTTAAAAA GAGAT TTT ATCTC TAAGCATAGTCAGTT TERM 3890 2990606 - 2990616 + H 76 -8.2 -4.18094 | overlap 2990605 CTGAGCCTGCCAGTC GCGC GCC GCGC TTTTACCCTCCTTTA SeD_A3099 2990703 - 2991002 + | regulatory protein, ArsR SeD_A3100 2991012 - 2991539 + | inner membrane protein YgaP SeD_A3101 2991618 - 2991797 + | hypothetical protein SeD_A3102 2992288 - 2991887 - | H-NS histone family protein TERM 3891 2992765 - 2992746 - g 100 -9.4 -4.86033 | opp_overlap 2992745 2992746 AAATCGCCAGAAAAA CAATGCAT TATA ATGCATTG ATTTAAAAGTAATTA SeD_A3103 2992658 - 2992771 + | hypothetical protein SeD_A3104 2992986 - 2993435 + | membrane protein TERM 3892 2993433 - 2993477 + T 75 -2.7 -5.14563 | opp_overlap 2993441, overlap 2993443 2993444 CATCAGGCTAAGGCG TAAGTTAACGTCGCGACTGGC ATT GCCAGTCGCGCTTTTAGTCGG TTTTTTCGTCGCCAA TERM 3893 2993468 - 2993441 - T 79 -12 -3.18199 | gap 1, opp_overlap 2993433 2993443 2993444 TAAGGCGTAAGTTAA CGTCGCGACTGGC ATT GCCAGTCGCG-CT TTTAGTCGGTTTTTT TERM 3894 2993443 - 2993467 + T 100 -15.7 -4.35675 | opp_overlap 2993441, overlap 2993433 2993444 AGGCGTAAGTTAACG TCGCGACTGGC ATT GCCAGTCGCGC TTTTAGTCGGTTTTT TERM 3895 2993444 - 2993466 + T 100 -19.2 -3.19778 | opp_overlap 2993441, overlap 2993443 2993433 GGCGTAAGTTAACGT CGCGACTGGC ATT GCCAGTCGCG CTTTTAGTCGGTTTT SeD_A3105 2993820 - 2993470 - | YgaC SeD_A3106 2993920 - 2993804 - | hypothetical protein SeD_A3107 2993982 - 2994308 + | putative inner membrane protein SeD_A3108 2995726 - 2994392 - | transcriptional regulator, GntR family with aminotransferase domain SeD_A3109 2995812 - 2996246 + | alkylhydroperoxidase AhpD family core domain protein SeD_A3110 2996261 - 2996419 + | hypothetical protein TERM 3896 2996469 - 2996488 + F 78 -6.3 -4.67635 | opp_overlap 2996459, overlap 2996459 CAACACCCGACGATC CGACGCG TTTCAT CGCGCCG TTTTCTCATTTTAAA SeD_A3111 2996518 - 2996763 + | glutaredoxin TERM 3897 2996914 - 2996951 + GF 70 -3.4 -4.68593 | overlap 2996917 CGTCATACGGCGGCG GCGGGATGGCCGGT-GCG GTGC CGCGACAGGTGATCC-GC TTTTTAAATGATGAA nrdI 2996760 - 2997170 + | NrdI protein TERM 3898 2997749 - 2997766 + GF 100 -10.5 -4.80882 | opp_overlap 2997749 CTGCAACTCTCCAAA CGCGGCG GCGG CGTCGCG TTTTTACTCTCCAAT TERM 3899 2997890 - 2997911 + GF 73 -7.9 -4.0641 | gap 1, overlap 2997891 GCCAACCAGCTTGGC GCGCGCCAGG GGG CC-GGCGCGG TTTATCTCCATGCGC TERM 3900 2997891 - 2997910 + GF 75 -11.4 -3.03525 | gap 1, overlap 2997890 CCAACCAGCTTGGCG CGCGCCAGG GGG CC-GGCGCG GTTTATCTCCATGCG TERM 3901 2998023 - 2997984 - gf 79 -2.9 -5.14965 | gap 1 ACGCTGACGAAAAAA TCC-GGATCAAAACGC TCTCTCTCG GCGTGGTGATCCCGGA CATCACCTTCCGGCT TERM 3902 2998065 - 2998051 - gf 74 -2.7 -4.86731 | opp_overlap 2998052, overlap 2998052 2998060 GCTGGCGAAAGAAAA CGCGC AAATG GCGCT CTTTTCGCCCTATGA SeD_A3113 2997143 - 2999287 + | ribonucleoside-diphosphate reductase, alpha subunit TERM 3903 2999935 - 2999968 + G 84 -8.9 -4.2461 | opp_overlap 2999939 AAAAACTATCGGCAA TCGAGCGTGAAGAGT TAAA GCTTTTCGCGCTGGA TTTGTTGATGGAACT SeD_A3114 2999298 - 3000257 + | ribonucleoside-diphosphate reductase, beta subunit TERM 3904 3000265 - 3000296 + F 90 -9.6 -4.41616 | ATTTTTAACCTTGCG GGCATGGGAAAT AACGTTAC ATTTTCCATGCC TTTATTTCAAGCAAT TERM 3905 3000370 - 3000398 + F 93 -9 -4.83593 | opp_overlap 3000361 3000370, overlap 3000372 ATACGAGTGACATTA TTCACCTGGATT CCTCC AATTCAGGTGGA TTTTTGCTGGTTGTT TERM 3906 3001054 - 3001044 - g 71 -4.6 -4.57073 | overlap 3001045 GAGCGTCGCGAAAAA GCGC TGG ACGC CTTGCGTCAGGTGGG proV 3000612 - 3001814 + | glycine betaine/L-proline ABC transporter, ATP binding protein SeD_A3116 3001807 - 3002871 + | glycine betaine/L-proline transport system permease protein ProW TERM 3907 3003318 - 3003308 - g 93 -4.6 -5.64274 | TGATCGATAAAAAAA CCGC CGA GCAG TACAACATCACCAAT SeD_A3117 3002941 - 3003936 + | glycine/betaine/proline transport protein TERM 3908 3003947 - 3003988 + F 81 -12.4 -3.16971 | gap 1, opp_overlap 3003959 AATAAGATCGTTTTT TATGCCGGATA-AGGCGCA GTTCA TGCGCCGCTATCCGGCCTA TTCAATCTCTCCTCA TERM 3909 3003975 - 3003959 - f 70 -9.4 -3.30124 | opp_overlap 3003947 TTTTATGCCGGATAA GGCGCA GTTCA TGCGCC GCTATCCGGCCTATT TERM 3910 3004861 - 3004882 + G 71 -10.1 -3.53444 | gap 1, overlap 3004860 TGATTGGCCTGTTTG GC-CTGGCGG GGG CCGCCGGCGC TTTAGGCGCGCGTCC TERM 3911 3005186 - 3005202 + G 85 -11.5 -4.0371 | opp_overlap 3005186, overlap 3005187 CTCCGCCTGGCAACA TGCCGGC TGG GCCGGCG TTTGTCTGGCGGGTG TERM 3912 3005187 - 3005201 + G 81 -12.8 -3.01905 | opp_overlap 3005186, overlap 3005186 TCCGCCTGGCAACAT GCCGGC TGG GCCGGC GTTTGTCTGGCGGGT SeD_A3118 3004101 - 3005285 + | major facilitator family protein TERM 3913 3005842 - 3005863 + G 71 -5.9 -4.24326 | opp_overlap 3005842, overlap 3005834 3005845 GCCAGCCGTCACGAA GACTTTCCT TACC AGGAAATTC TTTTGACTCGTCTTT TERM 3914 3005845 - 3005860 + G 71 -6.2 -4.22883 | opp_overlap 3005842, overlap 3005842 3005834 AGCCGTCACGAAGAC TTTCCT TACC AGGAAA TTCTTTTGACTCGTC mprA 3005782 - 3006312 + | transcriptional repressor MprA TERM 3915 3006360 - 3006383 + F 71 -7.4 -3.85817 | opp_overlap 3006354 ACAGGAAAGCGGACA GGCCGGCA CGCATTAC TGCTGGCC TTTCTGACAACAGGT TERM 3916 3006776 - 3006755 - g 74 -6.5 -4.323 | gap 1, opp_overlap 3006768, overlap 3006748 3006746 3006756 3006757 TTGAAAGAGCCAAAA CG-GCGCTGG CCT CCAGCGTGCG CCAAACGCACCAGTT TERM 3917 3006863 - 3006839 - g 84 -6.4 -5.03314 | gap 1, overlap 3006840 TCGACGTGCAAAAAA CCGCCCTGGCG CAAG CGC-AGAGCGA CCTTAACCGTCGTGT emrA 3006439 - 3007611 + | multidrug resistance protein A TERM 3918 3008386 - 3008411 + G 83 -7.6 -4.56791 | opp_overlap 3008388, overlap 3008379 3008389 GATCGTCTGGGAACT GACCGACGAT CACCCT ATCGTCGATC TTTCTCTTTTTAAAT emrB 3007628 - 3009166 + | multidrug resistance protein B TERM 3919 3009180 - 3009195 + F 100 -9 -5.14563 | opp_overlap 3009180 AACTATCTGATAAAA GGGATC TGCG GATCCC TTTTTTAGTAAACCA TERM 3920 3009195 - 3009180 - f 86 -9 -4.41206 | opp_overlap 3009180 AACTATCTGATAAAA GGGATC TGCG GATCCC TTTTTTAGTAAACCA TERM 3921 3009743 - 3009726 - f 78 -6.2 -4.56775 | ATCGCCGTTGAAAAA CGCCCG TTTTGC CAGGCG ATAACCGGACGGACG SeD_A3124 3010730 - 3010873 + | hypothetical protein TERM 3922 3010896 - 3010878 - T 100 -12.4 -5.5604 | opp_overlap 3010874 3010878 TTAAGCAATAAAAAA CCCCGGTC ATA AACCGGGG TTAATTTAAATACTG TERM 3923 3010878 - 3010896 + T 86 -11.7 -3.55122 | opp_overlap 3010878, overlap 3010874 TTAAGCAATAAAAAA CCCCGGT CATAA ACCGGGG TTAATTTAAATACTG luxS 3011446 - 3010931 - | S-Ribosylhomocysteinase TERM 3924 3011344 - 3011376 + g 71 -4.7 -4.56597 | opp_overlap 3011342 AACGCAGATCAAACA CGGTGATTGCGTCGC CAT GCGGGGTGTTCATCG TTTTTGCAACCCGGA TERM 3925 3011564 - 3011582 + r 100 -14.6 -5.48213 | opp_overlap 3011561 CAGCGATGAAATTTT GGCCACTC AGT GAGTGGCC TTTTTCTTTTGGGTC gshA 3013152 - 3011596 - | glutamate--cysteine ligase SeD_A3128 3013654 - 3013229 - | hypothetical protein SeD_A3129 3014217 - 3013651 - | HAD-superfamily hydrolase, subfamily IA TERM 3926 3014157 - 3014130 - G 74 -7.6 -4.09243 | gap 1, opp_overlap 3014131, overlap 3014131 CATAGCGCCCCAAAA CCTCACGCCACGC TTT GCGATGCGTG-GG TTCGGTATCCAGGAG TERM 3927 3014366 - 3014381 + r 72 -9 -3.57783 | overlap 3014372 ATTCACCTTATGGGC CGTTGC TGAC GCAACG TTATCCTTCTGATGC csrA 3015524 - 3015339 - | carbon storage regulator TERM 3928 3015707 - 3015752 + r 72 -9 -3.61089 | gap 2, opp_overlap 3015720 TTATCGTTGTCGATA GCGTTGACGTAAACGCCGCAGC ACGA GCTGCGGCGCCAACG--AACGC TTATAATTATTGCAA TERM 3929 3015741 - 3015720 - R 100 -17.3 -3.6502 | opp_overlap 3015707 TAGCGTTGACGTAAA CGCCGCAGC ACGA GCTGCGGCG CCAACGAACGCTTAT alaS 3018389 - 3015759 - | alanyl-tRNA synthetase recX 3019125 - 3018625 - | regulatory protein RecX TERM 3930 3019175 - 3019156 - R 91 -11.4 -4.26189 | opp_overlap 3019147 3019156 GGAGAAATGCCAAAA GGGCCGCA TAAA TGCAGCCC TTGATGGTAATTTAA recA 3020303 - 3019242 - | protein RecA SeD_A3139 3020885 - 3020388 - | competence/damage-inducible protein CinA domain protein TERM 3931 3021355 - 3021330 - R 80 -9.8 -3.89505 | gap 1, overlap 3021320 AAAAAGCCATAATAA TAGCGGAGGGG GTGCT CCCCTCC-CTA AGCGTAAATTAGCGC mltB 3022443 - 3021364 - | lytic murein transglycosylase B TERM 3932 3022911 - 3022924 + G 79 -3.1 -5.1471 | GCTACCTGCTTTTAC CGTTT ATCG GAACG TTTGTTTTTTGTAAT SeD_A3141 3022697 - 3023260 + | glucitol/sorbitol permease iic component TERM 3933 3023435 - 3023425 - g 71 -8.2 -3.9122 | overlap 3023426 GACGGCTTTAAAGAA GGCG AAC CGCC GGAAGCGGAGATCGG SeD_A3142 3023257 - 3024228 + | glucitol/sorbitol-specific phosphotransferase enzyme iib component srlB 3024240 - 3024602 + | PTS system, glucitol/sorbitol-specific, IIA component srlD 3024614 - 3025393 + | sorbitol-6-phosphate 2-dehydrogenase SeD_A3145 3025470 - 3025829 + | glucitol operon activator protein TERM 3934 3026274 - 3026261 - g 84 -3.1 -5.30686 | gap 1, overlap 3026263 AACACCCACAAAAAA GC-GCT GAT AGCCGC AGCCGCTGTGAAATA srlR 3026027 - 3026800 + | glucitol operon repressor gutQ 3026793 - 3027758 + | gutQ protein SeD_A3148 3029275 - 3027755 - | anaerobic nitric oxide reductase transcription regulator NorR TERM 3935 3029560 - 3029546 - g 86 -7.8 -4.68724 | overlap 3029547 GCACTGAATACAAAA CGCTGC GCG GCAGCA GCTATAACAGCTATC TERM 3936 3029851 - 3029837 - g 70 -7 -4.09739 | TTAAGGTGGTGAAAA CCGGCG ATA CGCTGG ATATCGGCAACGGCA norV 3029461 - 3030900 + | anaerobic nitric oxide reductase flavorubredoxin TERM 3937 3031322 - 3031308 - g 77 -11.4 -3.58726 | opp_overlap 3031317 3031319 3031320 GCCTGTGAGACACAA CTGCGC GAC GCGCAG CGAGTGCTGATTGTC SeD_A3150 3030897 - 3032030 + | nitric oxide reductase FlRd-NAD hypF 3034367 - 3032127 - | [NiFe] hydrogenase maturation protein HypF TERM 3938 3032388 - 3032368 - G 71 -6 -4.30844 | overlap 3032370 AGCGCATCATGAAAA GCCCAGGC GCGTT GCGCGGGC GTGGCCTGCCAGTTC TERM 3939 3032570 - 3032534 - G 76 -12.3 -3.12351 | gap 1, overlap 3032555 CGCCCTCATAGCTAA GCGAT-GCTGGCGCGC AGCGAA GCGCGGCAGCCACCGC GTCAAACAACCGCCC TERM 3940 3032714 - 3032700 - G 82 -11.4 -3.86346 | CCAGTCCGGCACAAA GCGCAG GCA CTGCGC CAACAGATTACGCCA SeD_A3152 3035058 - 3034513 - | protein AegA TERM 3941 3034543 - 3034557 + gr 87 -8.5 -4.58395 | opp_overlap 3034524 3034542 TGCCGTTGAATCCAG CGCCG CACGA CGGCG TTTTTCCGCGCTCAG SeD_A3153 3035161 - 3035027 - | hypothetical protein TERM 3942 3035165 - 3035194 + r 90 -15.1 -2.62616 | opp_overlap 3035181, overlap 3035153 TTTCGTGAGCATTTA CGTGTCATCGTCA CAAG TGTCGATGACACG TAATGTCGCCAGTGG SeD_A3154 3036068 - 3035259 - | hypothetical protein hycI 3036565 - 3036095 - | hydrogenase maturation peptidase HycI SeD_A3156 3036968 - 3036558 - | formate hydrogenlyase maturation protein TERM 3943 3036613 - 3036641 + g 70 -8.9 -3.75024 | opp_overlap 3036622, overlap 3036622 TCCTGATGAATGTCA TGCAGCATACTGA GCA TCAGTTTGCTCCA TTCTTGCTGCTGCGG TERM 3944 3036661 - 3036697 + g 71 -10.1 -3.59315 | gap 1, overlap 3036664 TGCTGCTGCGGGGTC TGCGCGGCGCGCGCCT CATCAA ACGCGCGCGCCA-GCA TTTGCACATGGTTGA TERM 3945 3036664 - 3036696 + g 76 -12.7 -2.75268 | gap 1, overlap 3036661 TGCTGCGGGGTCTGC GC-GGCGCGCGCCT CATCAA ACGCGCGCGCCAGC ATTTGCACATGGTTG hycG 3037732 - 3036965 - | formate hydrogenlyase, subunit G hycF 3038274 - 3037732 - | formate hydrogenlyase, subunit F hycE 3039993 - 3038284 - | formate hydrogenlyase, subunit E hycD 3040934 - 3040011 - | formate hydrogenlyase, subunit D hycC 3042763 - 3040937 - | formate hydrogenlyase, subunit C TERM 3946 3041009 - 3041021 + g 71 -10.5 -3.28712 | opp_overlap 3041005 3041003 ACGACGGAACAGCAC CGCGG CCG CCGCG TTCTGCCAGCCCGGC TERM 3947 3042356 - 3042338 - G 76 -12.4 -3.14211 | opp_overlap 3042338 3042337 3042340 ACCGCCGGTGAGGAA CACGGCGC AGA GCGCCATG ATTTCAGCCATCACC TERM 3948 3042713 - 3042701 - G 75 -6.9 -4.52214 | overlap 3042709 AAACGAAAACAGAAA CGCCA GAA CGGCG GCGGCGGCAAACCAC TERM 3949 3042737 - 3042709 - G 73 -10.2 -3.41528 | gap 1, overlap 3042701 ACAGAAACGCCAGAA CGGCGGCG-GCGG CAAA CCACGCGACGCCG CTAGTAATCAGTGAA hycB 3043371 - 3042763 - | formate hydrogenlyase, subunit B TERM 3950 3043493 - 3043463 - R 72 -9 -3.65542 | overlap 3043461 3043472 CCCATCCCCAAAACA TTCATGACATGGCG CAA CGCCATATCGAGAA TCAAAGCGGGCAACG SeD_A3163 3043978 - 3043517 - | formate hydrogenlyase regulatory protein hypA 3044188 - 3044544 + | hydrogenase nickel insertion protein HypA TERM 3951 3044576 - 3044545 - f 70 -8.8 -3.40601 | gap 1 GAAACTGAAGATTAA TGCCGGATAGACG CTCGCGT CGCC-ATCCGGCA GAAAGCCTGTAACAA hypB 3044613 - 3045485 + | hydrogenase isoenzymes nickel incorporation protein HypB hypC2 3045476 - 3045748 + | hydrogenase assembly chaperone HypC/HupF TERM 3952 3045867 - 3045889 + G 86 -7.6 -4.82855 | opp_overlap 3045865, overlap 3045868 GCGCATTATGGAAGT CTGCGGGGGT CAT ACCCACGCAA TTTTTAAATTTGGTC TERM 3953 3045868 - 3045888 + G 77 -11.1 -3.48629 | opp_overlap 3045865, overlap 3045867 CGCATTATGGAAGTC TGCGGGGGT CAT ACCCACGCA ATTTTTAAATTTGGT TERM 3954 3046643 - 3046615 - g 72 -11 -3.05384 | opp_overlap 3046606 CTGGGCGTGATTGAA TCCTCCGGCGTC CACCT GACGCCAGAGTA TCAGCGCTTTGACGC hypD 3045748 - 3046869 + | hydrogenase expression/formation protein HypD TERM 3955 3047005 - 3047027 + G 70 -5.4 -4.38712 | opp_overlap 3047005 AGCTGGCGCAACTGA CGGCGGAGGG CGA CCGTCTGGCG TTTTCTACCGATAGC hypE 3046866 - 3047876 + | hydrogenase expression/formation protein HypE SeD_A3169 3048110 - 3050173 + | formate hydrogenlyase transcriptional activator SeD_A3170 3050579 - 3050235 - | hypothetical protein TERM 3956 3050377 - 3050417 + g 95 -9.6 -4.72272 | opp_overlap 3050391, overlap 3050378 ATCTCCTCGCGTTTA GCCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGGG TTTTTCCTCGCCAAA TERM 3957 3050378 - 3050416 + g 84 -13.1 -3.43042 | opp_overlap 3050391, overlap 3050377 TCTCCTCGCGTTTAG CCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGG GTTTTTCCTCGCCAA TERM 3958 3051345 - 3051311 - g 74 -2.1 -5.09426 | gap 1 CCGAACTGGAAAAAA TTC-CCGCCGATCAGC GCTG GCTGGTCACCAGTGAA GGCGCGTTCTCTTAC SeD_A3171 3050761 - 3051678 + | periplasmic chelated iron-binding protein YfeA SeD_A3172 3051675 - 3052496 + | chelated iron transport system membrane protein YfeB SeD_A3173 3052493 - 3053353 + | chelated iron transport system membrane protein YfeC SeD_A3174 3053344 - 3054192 + | chelated iron transport system membrane protein YfeD SeD_A3176 3056114 - 3055359 - | transcriptional regulator TERM 3959 3055534 - 3055550 + g 77 -3.7 -5.03145 | TAAATACTGACGGTT TTTGTTC CCA GACCAAA TTTTTTCGCCAGTTC SeD_A3177 3057385 - 3056498 - | transcriptional regulator, AraC family SeD_A3178 3058092 - 3057730 - | putative cytoplasmic protein TERM 3960 3057794 - 3057771 - G 71 -6 -4.36914 | opp_overlap 3057771 3057774, overlap 3057775 CCCCGCCCGATAAAA TAATCTCCTG CATC CAGGAGGTCA TTTGTGACTGTGCGT SeD_A3179 3058859 - 3058179 - | oxygen-regulated invasion protein OrgB SeD_A3180 3059394 - 3058816 - | type III secretion apparatus protein OrgA/MxiK TERM 3961 3059179 - 3059208 + gr 100 -16.5 -3.11073 | overlap 3059179 3059182 TTGCGGCAGTCGGCG CCACTGACGCAGC CACA GCTGCGTCAGTGA GTTTTGAATACACTC TERM 3962 3059179 - 3059209 + gr 100 -16.3 -4.1899 | gap 1, overlap 3059179 3059182 TTGCGGCAGTCGGCG C-CACTGACGCAGC CACA GCTGCGTCAGTGAG TTTTGAATACACTCC TERM 3963 3059182 - 3059205 + gr 100 -16.8 -2.76404 | overlap 3059179 3059179 CGGCAGTCGGCGCCA CTGACGCAGC CACA GCTGCGTCAG TGAGTTTTGAATACA SeD_A3181 3060145 - 3059387 - | type III secretion apparatus lipoprotein, YscJ/HrcJ family TERM 3964 3059419 - 3059450 + g 77 -4.5 -4.91109 | opp_overlap 3059448 TCGCCTTATCATCAG CCGTTATGCCT TTCTTATTGC GGGCATAATGG TTTTTGTAATACCAG SeD_A3182 3060447 - 3060142 - | protein PrgJ eprI 3060708 - 3060466 - | type III secretion apparatus needle protein eprH 3061797 - 3060733 - | type III secretion apparatus protein PrgH/EprH SeD_A3185 3062227 - 3063156 + | transcriptional regulator HilD TERM 3965 3063427 - 3063459 + F 100 -11.3 -4.81163 | overlap 3063429 GATGACACTATCTCC TTCCGGCTTTAACCC TGT GGATTAAGGCCGGCA TTTTATTCATATTTA TERM 3966 3063429 - 3063457 + F 83 -13.9 -2.66616 | overlap 3063427 TGACACTATCTCCTT CCGGCTTTAACCC TGT GGATTAAGGCCGG CATTTTATTCATATT SeD_A3186 3064247 - 3065914 + | transcriptional regulator HilA SeD_A3187 3065932 - 3066414 + | cell invasion protein TERM 3967 3066470 - 3066415 - T 74 -7.2 -4.32678 | opp_overlap 3066424 3066426, overlap 3066426 GCGTCAAACAAATAA TTATACAGAAATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATGTTTTTATCA GCGTGCCGTCGTCAT TERM 3968 3066424 - 3066461 + T 100 -10.1 -4.84359 | opp_overlap 3066415 3066426, overlap 3066426 AAATAATTATACAGA AATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATG TTTTTATCAGCGTGC TERM 3969 3066459 - 3066426 - T 100 -14.9 -4.18019 | opp_overlap 3066424 3066426, overlap 3066415 ATAATTATACAGAAA TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA TGTTTTTATCAGCGT TERM 3970 3066426 - 3066459 + T 95 -12.7 -4.04397 | opp_overlap 3066426 3066415, overlap 3066424 ATAATTATACAGAAA TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA TGTTTTTATCAGCGT SeD_A3188 3068075 - 3066468 - | effector protein SptP SeD_A3189 3068478 - 3068086 - | secretion chaparone SeD_A3190 3068729 - 3068505 - | hypothetical protein SeD_A3191 3069057 - 3068809 - | acyl carrier protein SeD_A3192 3071088 - 3069076 - | cell invasion protein SipA TERM 3971 3070268 - 3070278 + g 76 -3.2 -5.0133 | TTGATATTAATACCC GTAG GTT CTGC TTTTTTCCCACCATC TERM 3972 3073238 - 3073258 + r 71 -6.9 -4.07687 | CAAATCCTGATTCAT GTCGGTATT TTG AATACTGGC TTTTAAAAAGGACGT SeD_A3195 3075292 - 3073511 - | cell invasion protein SipB TERM 3973 3073553 - 3073539 - G 74 -4.2 -4.77165 | opp_overlap 3073540, overlap 3073540 TGGCGCAGAATAAAA CGCGAA GCA TCCGCA TTTTGCTGTACCGCA TERM 3974 3073701 - 3073683 - G 70 -5.2 -4.46212 | opp_overlap 3073685 3073686, overlap 3073684 3073686 3073691 CGGGCGAGCATAAAA TCAGCAAG CGC CTCGCTGG CATTTTTAATAAATA TERM 3975 3073685 - 3073703 + g 74 -4.4 -4.7497 | opp_overlap 3073684 3073683 3073686 3073691, overlap 3073686 GGCGAGCATAAAATC AGCAAGCG CCT CGCTGGCA TTTTTAATAAATACG TERM 3976 3074074 - 3074088 + g 74 -4.2 -4.77165 | CACCAACAATGCTGC CGGC CATCTCT GCCG TTTTCTTATCGACGC TERM 3977 3074309 - 3074293 - G 73 -5.1 -4.59773 | overlap 3074305 CCCCACCGGTAAAAA CAGCG GCCACAA CGCTG ACAATGGTTAGCAGC TERM 3978 3074834 - 3074846 + g 81 -6.9 -4.77438 | GTCATAAACACTCTT GGCGG TAT CCGTC TTTTTGATACTGGCT TERM 3979 3075242 - 3075225 - G 74 -7.7 -4.09739 | gap 1, opp_overlap 3075231, overlap 3075214 3075226 CGAACGCCTTCAAAA GCCGCCTC AGC GAGGCG-C GGATTTTGGGTATAT SeD_A3196 3075792 - 3075295 - | type III secretion low calcium response chaperone LcrH/SycD SeD_A3197 3077000 - 3075930 - | surface presentation of antigens protein SpaS epaR 3077778 - 3076987 - | type III secretion apparatus protein SpaR/YscT/HrcT TERM 3980 3077597 - 3077587 - G 72 -2.4 -4.87665 | CGCCACCGATAAAAA CGGC GGC GCCT CGTTCAATGCATGCG TERM 3981 3077716 - 3077703 - G 95 -3.1 -5.84381 | gap 1 GCAGGAAGAAAAAAA TCGGCG CTA CGC-GA GCAAACCCTAGTGCC SeD_A3199 3078042 - 3077782 - | EpaQ TERM 3982 3077993 - 3077941 - G 79 -11.4 -3.61715 | gap 1, overlap 3077942 TACCGTCTGGAATAA CCCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGGA TCAAAACAAGATAGA TERM 3983 3077992 - 3077942 - G 76 -12.7 -2.76815 | gap 1, overlap 3077941 ACCGTCTGGAATAAC CCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGG ATCAAAACAAGATAG epaP 3078742 - 3078068 - | type III secretion apparatus protein, YscR/HrcR family epaO 3079643 - 3078732 - | type III secretion apparatus protein, YscQ/HrcQ family TERM 3984 3079108 - 3079094 - G 71 -5.7 -4.24342 | TCGCGTAGCAATAAA CTTCC GCACG GGAAG TACGAATCAGGAGTA SeD_A3202 3080653 - 3079643 - | antigen presentation protein SpaN TERM 3985 3080120 - 3080137 + g 74 -6.9 -4.30719 | opp_overlap 3080119 GCCCTCTTTACGAAC GCCTTCG CCCG CGATGGC TTTATTATCCCCAGG TERM 3986 3080471 - 3080481 + g 71 -4.6 -4.59089 | TGCCGCCAGTAATAC CGGT AAA GCCG TTTCTTTATGCATTA SeD_A3203 3081096 - 3080653 - | surface presentation of antigens protein SpaM SeD_A3204 3082369 - 3081074 - | flagellum-specific ATP synthase TERM 3987 3081659 - 3081634 - G 72 -2.4 -4.91712 | overlap 3081635 TGGAATCGATAAAAA GCACGACCCG TTTTCC CTGGTCGCGA AAATATTCCGCTACG TERM 3988 3082300 - 3082320 + g 86 -7.5 -4.73105 | CCACATCGCGCAATT CCGCCTCAA TAA TTGGGCCGG TTATTTTTTGTGGGT SeD_A3205 3082773 - 3082366 - | surface presentation of antigens protein SpaK TERM 3989 3082526 - 3082510 - G 78 -12.3 -3.21099 | CTCCCCCAGTAGTAA TTGCCCG CCG CGGGCAA AATGGCATCCTTCCA SeD_A3206 3084854 - 3082797 - | invasion protein InvA TERM 3990 3084453 - 3084429 - G 73 -5.5 -4.55689 | opp_overlap 3084430, overlap 3084430 ACCATCCAGAGAAAA TCGGGCCGCGA CTT CCGCGACGCGT TCTGAACCTTTGGTA SeD_A3207 3085997 - 3084879 - | invasion protein InvE SeD_A3208 3087538 - 3085994 - | type III secretion outer membrane pore, YscC/HrcC family SeD_A3209 3088428 - 3087679 - | invasion protein TERM 3991 3088378 - 3088390 + g 70 -9.1 -3.66438 | overlap 3088370 CCATGCTTCCGGGCT GCGGA TTT TCCGC TTCTCTCCTTCTTTA TERM 3992 3089072 - 3089061 - g 71 -5.8 -4.29621 | TATAAACAAACCAAA GAGC AGGC GCTC ACCTTCTTCCAGGAA TERM 3993 3089160 - 3089148 - g 79 -3.4 -5.16572 | opp_overlap 3089136 ACCGAATTTAAAAAA GTTC TTCTT GAAC CCGGAAGTAAGAATT SeD_A3210 3088785 - 3089228 + | cell adherance/invasion protein TERM 3994 3089380 - 3089398 + F 87 -10.3 -4.19311 | opp_overlap 3089367 3089382, overlap 3089382 ATCTGCTTTTTGATA CAGCAGC ACCTC GCTGCTG CTTTTTTTATTTGTG TERM 3995 3089382 - 3089399 + F 100 -7 -6.02919 | opp_overlap 3089367 3089382, overlap 3089380 CTGCTTTTTGATACA GCAGCA CCTCGC TGCTGC TTTTTTTATTTGTGA SeD_A3211 3090089 - 3090370 + | putative ABC-type transport system TERM 3996 3090435 - 3090407 - g 90 -10.4 -4.2349 | CCGCGATAGGGAAAA CCCACAATCGAA TGAAT TTTGATTGTGGG GATGCCGATCTGAAC SeD_A3212 3090370 - 3090894 + | acetyltransferase, gnat family TERM 3997 3092236 - 3092246 + G 89 -3.2 -5.44119 | overlap 3092234 GGTTCTTTCTGTTCA GGCA ATC TGTC TTTTTTTAAAATAAA SeD_A3214 3091609 - 3092265 + | serine/threonine-protein phosphatase 2 SeD_A3215 3092931 - 3092437 - | hypothetical protein SeD_A3216 3093626 - 3092958 - | hypothetical protein TERM 3998 3093785 - 3093765 - R 74 -10.5 -3.25823 | GCTCCCGGAGATTAA TGAGAGACA TCC TGCCTCTCA CCGAAGACCAACCAC SeD_A3217 3094171 - 3094049 - | hypothetical protein TERM 3999 3095980 - 3095965 - g 90 -4.6 -5.40072 | overlap 3095967 CGTTGCGTAAAAAAA TGGGCG ATTT CGCCGA GCTGCGCGACCTCCT mutS 3094770 - 3097337 + | DNA mismatch repair protein MutS TERM 4000 3097378 - 3097339 - T 88 -12.8 -3.5394 | gap 1 AAAGTCTGGTGTAAA CGTGTCGGGCCCGATAGCG CCG CGCTATCGGGTCTG-CGCG CCGGAACAGGCTTTT SeD_A3219 3097773 - 3097393 - | putative cytoplasmic protein TERM 4001 3097623 - 3097613 - G 95 -8.2 -5.00616 | TGCGCCTGGAAAAAA GCGC CCA GCGC CGGATAATCCAGACA SeD_A3220 3098978 - 3097770 - | major facilitator family transporter TERM 4002 3098906 - 3098896 - G 74 -6.8 -4.27617 | GACATCGCAGGAAAA GCCA CGC TGGC AATAAACAGATTAAT TERM 4003 3099074 - 3099050 - H 82 -13.1 -2.90075 | overlap 3099052 CGCGCTTCAACGATA TACTGTCAAAA TAA TTTTGACAGTA AAGGAGTTCGCCATG TERM 4004 3099072 - 3099052 - H 75 -11.3 -3.00298 | overlap 3099050 CGCTTCAACGATATA CTGTCAAAA TAA TTTTGACAG TAAAGGAGTTCGCCA SeD_A3221 3099087 - 3099998 + | transcriptional regulator, LysR family SeD_A3222 3101536 - 3100040 - | GntP TERM 4005 3101447 - 3101413 - G 81 -12.9 -3.02144 | gap 1, overlap 3101415 CCATTCCCCCCAACA GACCGGCGATGCAGGC CGCC GCCAGCATCGC-GATC AGCGCATGAACACGG SeD_A3223 3102483 - 3101533 - | NAD dependent epimerase/dehydratase family protein TERM 4006 3103099 - 3103043 - R 76 -12 -2.52023 | gap 1, opp_overlap 3103043, overlap 3103040 3103042 GAGCCAGATCAATAT CGGCGCGCGCGTCGTGTTCGCGCCCCG GTAG CGCGGCACGTCCCC-ACTCGCCCGCCG CGGTATCGCCCGCCG SeD_A3225 3103941 - 3103303 - | aldolase class II protein YgbL TERM 4007 3103480 - 3103465 - G 78 -6 -4.75372 | ATTAGCCAGTAAAAA GGCCTG ATGC CGGGCC GCCAGCGCGGCCAAA SeD_A3226 3105200 - 3103938 - | YgbK domain protein SeD_A3227 3106117 - 3105194 - | 6-phosphogluconate dehydrogenase NAD-binding TERM 4008 3106224 - 3106210 - H 75 -2.9 -5.24129 | opp_overlap 3106210, overlap 3106213 TTGTTTCACAAAAAA TAACA AAATA TGTTA TTTTTTGTGAAGGCA TERM 4009 3106210 - 3106224 + H 75 -2.9 -5.24129 | opp_overlap 3106210 3106213 TTGTTTCACAAAAAA TAACA AAATA TGTTA TTTTTTGTGAAGGCA SeD_A3228 3106314 - 3107078 + | transcriptional regulator, DeoR family TERM 4010 3107095 - 3107084 - T 77 -7.2 -4.52347 | overlap 3107085 CAAACAATAGCAAAA CGGC GCAA GCCG CTTACGTCATCATCT SeD_A3229 3107501 - 3107097 - | transcriptional regulator HosA kpdB 3107672 - 3108265 + | 4-hydroxybenzoate decarboxylase, subunit B kpdC 3108265 - 3109692 + | 4-hydroxybenzoate decarboxylase, subunit C kpdD 3109703 - 3109939 + | 4-hydroxybenzoate decarboxylase, subunit D TERM 4011 3109977 - 3109934 - T 100 -14.8 -4.27117 | opp_overlap 3109946, overlap 3109946 CTGGCAGAAGACAAA CGGTAAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTGACAA GGGTACTTACTCGCG TERM 4012 3109965 - 3109946 - T 100 -13.6 -5.82388 | opp_overlap 3109946, overlap 3109934 AAACGGTAAAAAAAA GGCCAGTC TGTC GACTGGCC TTTTTTTGACAAGGG TERM 4013 3109946 - 3109965 + T 100 -13.6 -5.40072 | opp_overlap 3109946 3109934 AAACGGTAAAAAAAA GGCCAGTC TGTC GACTGGCC TTTTTTTGACAAGGG rpoS 3110976 - 3109984 - | RNA polymerase sigma factor RpoS SeD_A3234 3112172 - 3111039 - | lipoprotein NlpD TERM 4014 3111503 - 3111517 + g 73 -5 -4.6635 | overlap 3111494 CCGTCCCAGCAGGCT TGTTGT TTG GCAACA TTTTGTTAGCACTTT pcm 3112974 - 3112348 - | protein-L-isoaspartate O-methyltransferase TERM 4015 3112427 - 3112411 - G 77 -7.9 -4.33417 | overlap 3112412 GGTATCGATAATAAA TTCGCCG CCC CGGCGAC GCACGCGTTTCAAAA TERM 4016 3112426 - 3112412 - G 74 -11.4 -3.19568 | overlap 3112411 GTATCGATAATAAAT TCGCCG CCC CGGCGA CGCACGCGTTTCAAA surE 3113735 - 3112968 - | 5'/3'-nucleotidase SurE truD 3114759 - 3113710 - | tRNA pseudouridine synthase D TERM 4017 3113790 - 3113777 - GR 77 -8.1 -4.07687 | ACGCTGGTGGCAAAA CTGCC TGCG GGCAG CCAGAAACGTAACTC TERM 4018 3114167 - 3114157 - GR 74 -8.2 -4.01158 | overlap 3114158 AATTTGATTAAACAA CGCG CTA CGCG CCGCCGACAACCAAA TERM 4019 3114201 - 3114214 + gr 75 -9.5 -3.51232 | overlap 3114198 TGCGTTTATTGCGAT CGCGC ACCG GCGCG TTACTTTGCGCCCAG ispF 3115235 - 3114756 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 3115945 - 3115235 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 4020 3115554 - 3115568 + g 70 -7 -4.21908 | opp_overlap 3115554, overlap 3115537 3115556 GGACTGGCGAGGATA CCGCCG ACC CGGCTG TTTTCGCTGATGGTC ftsB 3116275 - 3115964 - | cell division protein FtsB TERM 4021 3116382 - 3116354 - R 74 -10.3 -3.29144 | opp_overlap 3116354 3116355, overlap 3116355 GGATTGCCGCGACAA CGCCGGCAAATGT ACC ACATTTGCCGGAT GTTACGTATACCCGA TERM 4022 3116354 - 3116383 + r 81 -12.3 -3.12351 | gap 1, opp_overlap 3116354 3116355, overlap 3116355 GGATTGCCGCGACAA CG-CCGGCAAATGT ACC ACATTTGCCGGATG TTACGTATACCCGAG TERM 4023 3116355 - 3116381 + r 86 -13.8 -3.12327 | opp_overlap 3116355 3116354, overlap 3116354 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 4024 3116381 - 3116355 - R 83 -13.8 -2.57344 | opp_overlap 3116354 3116355, overlap 3116354 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 4025 3116505 - 3116490 - R 76 -8.2 -4.15698 | TAGCCATATAAATAA CGCGCC GAAC AGCGCG CCTACGGCCAGTAGA SeD_A3242 3116744 - 3116466 - | YgbE cysC 3117445 - 3116840 - | adenylylsulfate kinase TERM 4026 3117382 - 3117353 - G 79 -12.9 -2.90813 | gap 1, opp_overlap 3117355, overlap 3117350 3117355 GAGTCCGGTAAACCA CAGCACCAC-GCCA CGG TGGCCGTGGAGCTG TTCACGAGCGGCGAC SeD_A3244 3118871 - 3117432 - | sulfate adenylyltransferase subunit 1 TERM 4027 3117669 - 3117617 - G 70 -2.8 -4.82901 | gap 2, opp_overlap 3117625, overlap 3117620 3117621 GTCGGTCGATAAAAA TCAGCCCGCCCGTCACCGGATTTT GCTGATA AATATCCAGCG-CGAGC-GGCTCA TCGAATGTCATCTCC TERM 4028 3118007 - 3117991 - G 71 -5.8 -4.26076 | overlap 3118000 TTATCGCCATCAAAA GTGACG ATACG CGCCAC GCTGGATTCCACGCC cysD 3119789 - 3118881 - | sulfate adenylyltransferase, subunit 2 SeD_A3246 3120040 - 3121086 + | alkaline phosphatase isozyme conversion protein TERM 4029 3121161 - 3121193 + G 74 -2.6 -5.07486 | gap 1, opp_overlap 3121161, overlap 3121162 ATCTATGCAACCCAA CCGGTTTATCCCCGC TGGC GCGGGGA-ACACGGA TTTTTCTTGAACGTG SeD_A3247 3121101 - 3121256 + | hypothetical protein cas2 3121641 - 3121348 - | crispr-associated protein Cas2 cas1 3122561 - 3121641 - | crispr-associated protein Cas1 TERM 4030 3121936 - 3121925 - G 91 -7.2 -5.00611 | CATAAACAAAAGAAA GCGG CTTA CCGC TATGGATAAAACCGA cse3 3123208 - 3122558 - | crispr-associated protein, Cse3 family cas5 3123936 - 3123190 - | CRISPR-associated protein Cas5 TERM 4031 3123728 - 3123710 - G 74 -11.6 -3.29511 | overlap 3123711 TGCACCGTGTGATAA TCCCGCGC CCA GCGCGGGT TGCCGCTGGCGCACA TERM 4032 3123727 - 3123711 - G 83 -15.1 -2.57564 | overlap 3123710 GCACCGTGTGATAAT CCCGCGC CCA GCGCGGG TTGCCGCTGGCGCAC cse4 3125005 - 3123947 - | crispr-associated protein, Cse4 family TERM 4033 3124431 - 3124419 - G 79 -7.7 -4.52345 | opp_overlap 3124419 ACAGCAGTAAAGAAA TCGTC TTC GACGA TCGTTTCGCTGACGC TERM 4034 3124707 - 3124725 + g 91 -7.5 -5.03715 | TTTTCCGCCTTTACC TTGCCAA AACAG TTGGCAA TTTTTTCCACATACT cse2 3125579 - 3125019 - | crispr-associated protein, Cse2 family cse1 3127132 - 3125576 - | crispr-associated protein, Cse1 family TERM 4035 3129098 - 3129119 + H 76 -4.3 -5.02074 | opp_overlap 3129114 TTAGCGAGAGCTTGC TGCCAGTAG GTAT CAACAGGCA TTTTTTCCGCAGTAC SeD_A3257 3130122 - 3131204 + | Sop effector protein SopD TERM 4036 3131250 - 3131234 - T 83 -9.4 -4.32804 | opp_overlap 3131234 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTTCATAACAGCA TERM 4037 3131234 - 3131250 + T 89 -9.4 -4.72272 | opp_overlap 3131234 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTTCATAACAGCA cysH 3132026 - 3131292 - | phosphoadenosine phosphosulfate reductase cysI 3133840 - 3132128 - | sulfite reductase (NADPH) hemoprotein, beta-component SeD_A3260 3135639 - 3133840 - | sulfite reductase [NADPH] flavoprotein, alpha-component SeD_A3261 3136119 - 3135964 - | hypothetical protein SeD_A3262 3136063 - 3136425 + | 6-pyruvoyl tetrahydrobiopterin synthase SeD_A3263 3137310 - 3136513 - | beta-lactamase domain protein TERM 4038 3137530 - 3137562 + r 72 -9.2 -3.61398 | gap 1, opp_overlap 3137530 3137529 GTCTGCATCAGTAAC TCGGTTTATCCCCGC TGGC GCGGGGA-ACACTGA TTATTGACGACAACA TERM 4039 3137592 - 3137622 + r 72 -10.5 -2.76696 | gap 1, overlap 3137591 3137594 AGCACAGACCGGCAG CAGTTTATCCCCGC TGGC GCGGGGA-ACACTG ATTATTGACGACAAC TERM 4040 3137862 - 3137872 + r 89 -4 -5.67283 | opp_overlap 3137862 TTGATGCAAAAAAGT TCAT AGA ATGA TTTTTTCTTTAAATT SeD_A3264 3138008 - 3137862 - | hypothetical protein SeD_A3265 3138710 - 3138039 - | radical SAM domain protein TERM 4041 3138113 - 3138125 + g 80 -9.1 -4.09519 | opp_overlap 3138113 ACGTTTCAATACACA GACGC GTC GCGTC TTCTTTCTGGCTAAT TERM 4042 3138657 - 3138641 - G 78 -2.2 -5.24551 | GTAAACGAATAAAAA TAGCGG GGACG CCGGTA AAATAACCCTCGCCT TERM 4043 3138818 - 3138805 - R 100 -9.5 -5.77988 | opp_overlap 3138805 ACAGATACAAAAAAA CCCGC CGAA GCGGG TTTTTACATTAAGAG TERM 4044 3138805 - 3138818 + r 100 -9.5 -4.74103 | opp_overlap 3138805 ACAGATACAAAAAAA CCCGC CGAA GCGGG TTTTTACATTAAGAG eno 3140144 - 3138846 - | phosphopyruvate hydratase TERM 4045 3139410 - 3139425 + g 73 -5.4 -4.57569 | AGATGCTGCGCAGTC CATCGC CAGG GTGATG TTTTTACCCAGCTCG TERM 4046 3140212 - 3140189 - R 100 -13.9 -4.08164 | opp_overlap 3140187 3140186 AAAACTTCAGACAAA CGGTGCACC GCTGAG GGTGCACCG CCGTTCTAACTTTTT pyrG 3141864 - 3140227 - | CTP synthase SeD_A3268 3142892 - 3142092 - | nucleoside triphosphate pyrophosphohydrolase TERM 4047 3142490 - 3142505 + g 87 -8.2 -4.57073 | overlap 3142493 3142499 GCGGAATATCGTCCA GCGCGG AATG CTGCGC TTTTTGCGCGCGCTC TERM 4048 3143247 - 3143266 + H 91 -8 -5.24531 | CGCCAGTTTAATATT CAAAAAAG ACCG CTTTTTTG TTTTTTCTGGAACAT SeD_A3269 3143498 - 3144085 + | putative fimbrial subunit TERM 4049 3144101 - 3144146 + F 74 -5.4 -4.63932 | opp_overlap 3144112, overlap 3144112 TTCAGTTAACAGAGT CACGACGATAATACCCTGCC GCTTTA GGTAGGGTATTCCTGTTGAG TTTTATTGCGGAATA TERM 4050 3144112 - 3144135 + F 70 -8.9 -3.41203 | opp_overlap 3144112, overlap 3144101 GAGTCACGACGATAA TACCCTGCC GCTTTA GGTAGGGTA TTCCTGTTGAGTTTT SeD_A3270 3144219 - 3146864 + | fimbrial usher protein TERM 4051 3147036 - 3147026 - g 71 -4.6 -4.59773 | overlap 3147027 CGTCACGCTGAAAAA CGGC AAC GCCA CTCTGCCCTACCTCG SeD_A3271 3146877 - 3147650 + | chaperone protein PapD SeD_A3272 3147670 - 3148176 + | fimbrial subunit SeD_A3273 3148191 - 3148661 + | fimbrial subunit SeD_A3274 3148658 - 3149194 + | fimbrial subunit SeD_A3275 3149249 - 3150280 + | hypothetical protein SeD_A3276 3152864 - 3150630 - | GTP pyrophosphokinase TERM 4052 3151770 - 3151787 + g 77 -8.3 -4.1523 | overlap 3151768 ATGACCGGAGCGCAC GCCGCCG GACG CGGCGCC TTCTTTATACTTCCA TERM 4053 3152909 - 3152883 - R 73 -10.9 -2.52464 | gap 1, opp_overlap 3152880 CCTCTCCTTAAGGGA CCAGGCCTACCG AAGT CGGTAAGCC-GG TAATCATTACATGCG rumA 3154211 - 3152916 - | 23S rRNA (uracil-5-)-methyltransferase RumA TERM 4054 3154810 - 3154821 + G 85 -2.2 -5.47159 | AGATTTTTATCTCCA GCGT GATG ATGC TTTTTTGTATTGGCA TERM 4055 3155141 - 3155120 - g 71 -4.3 -4.57569 | opp_overlap 3155121, overlap 3155121 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAGTCGGAGTTC SeD_A3278 3154269 - 3157025 + | signal transduction histidine-protein kinase BarA SeD_A3279 3158211 - 3157069 - | glycerate kinase 2 TERM 4056 3158259 - 3158284 + r 100 -17.7 -2.52464 | opp_overlap 3158259 3158262, overlap 3158262 CATACACCCAGAGAA GAACCGGTTCC TTAC GGAACCGGTTC TGACTTAACGCACCA TERM 4057 3158284 - 3158259 - R 100 -17.7 -3.54436 | opp_overlap 3158259 3158262, overlap 3158262 CATACACCCAGAGAA GAACCGGTTCC TTAC GGAACCGGTTC TGACTTAACGCACCA TERM 4058 3158281 - 3158262 - R 100 -13.6 -3.90092 | opp_overlap 3158259 3158262, overlap 3158259 ACACCCAGAGAAGAA CCGGTTCC TTAC GGAACCGG TTCTGACTTAACGCA TERM 4059 3158262 - 3158281 + r 90 -13.6 -3.41878 | opp_overlap 3158262 3158259, overlap 3158259 ACACCCAGAGAAGAA CCGGTTCC TTAC GGAACCGG TTCTGACTTAACGCA SeD_A3280 3159629 - 3158289 - | glucarate dehydratase TERM 4060 3159734 - 3159746 + r 76 -4.7 -4.84359 | TGCATCATTACGCGC GCCGC CTG GCAGC TTTTTATACGCGTCA TERM 4061 3159820 - 3159833 + r 91 -8.1 -4.98531 | CTGGCGCATCCGGAA CGGCA ATTT TGCCG TTTTTAATTTCCAGC TERM 4062 3160110 - 3160144 + r 90 -15 -2.62184 | overlap 3160106 TGCCCCATTTCGCGC CAGTTGGTGGCGATCA TAT TGGTCGCCACCGGCAG TCCTGTCGCGCGGCG TERM 4063 3160304 - 3160318 + r 85 -5.6 -5.40072 | ATCCACGGTAATACG CGCGTC CGG GAAGCG TTTTTTTAGCGCGCG TERM 4064 3160928 - 3160951 + r 70 -10.4 -2.56728 | gap 1, opp_overlap 3160926, overlap 3160927 GTTGAGTAGCATACT GTCATGTCCGG CAA CCGGA-ATGAC CTTCATGTCCGTAAT gudP 3162345 - 3160987 - | glucarate permease TERM 4065 3162050 - 3162038 - G 85 -9.1 -4.46757 | AAGATATCGACAAAA CCCTG CAA CAGGG TGAAGACTGACCAAA TERM 4066 3162511 - 3162499 - g 76 -3.3 -5.01535 | GGAGAAGTATAAAAA GCGCG CCA CACAC ACTCACCGTGCAACA SeD_A3284 3162428 - 3162676 + | hypothetical protein TERM 4067 3162799 - 3162818 + T 72 -10.7 -2.78679 | opp_overlap 3162799 3162796, overlap 3162798 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA TERM 4068 3162818 - 3162799 - T 72 -10.7 -2.82666 | opp_overlap 3162798 3162799, overlap 3162796 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA SeD_A3285 3163275 - 3162826 - | flavodoxin SeD_A3286 3164076 - 3163294 - | tRNA pseudouridine synthase C SeD_A3287 3164405 - 3164076 - | hypothetical protein TERM 4069 3164330 - 3164307 - G 89 -13.2 -3.53012 | gap 1 TTGGGTGCTGGTAAA CAGG-TGCGCC TGC GGCGCATCCTG CCGCCAGTGGCGATG TERM 4070 3164453 - 3164482 + r 79 -10.7 -3.51411 | opp_overlap 3164455, overlap 3164449 3164454 AAGAATAACAAAAAA AAGGGAGCACTGT ATAA ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 4071 3164454 - 3164481 + r 83 -14.2 -2.70525 | opp_overlap 3164455, overlap 3164453 3164449 AGAATAACAAAAAAA AGGGAGCACTGT ATAA ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 4072 3164480 - 3164455 - R 100 -17.7 -6.22691 | opp_overlap 3164454 3164453 3164449 GAATAACAAAAAAAA GGGAGCACTGT ATAA ACAGTGCTCCC GGTTCGTTTCGCAGC SeD_A3289 3165577 - 3165017 - | protein syd queF 3165630 - 3166478 + | queuine synthase TERM 4073 3167322 - 3167311 - g 72 -3.6 -4.70659 | CCGGATATCGAAAAA CGCC TGGA AGCG TTCGTCCGTATCGCA SeD_A3291 3166591 - 3167955 + | lysine decarboxylase family protein TERM 4074 3167961 - 3167989 + T 77 -10.2 -3.3858 | overlap 3167962 3167984 CTGCGCTTAACGCTT ATGCCCGGTTGC CGCCA GCAGCCGGGCGC TTCTCCCATTCCTTT TERM 4075 3167962 - 3167988 + T 83 -13.7 -2.62425 | overlap 3167961 3167984 TGCGCTTAACGCTTA TGCCCGGTTGC CGCCA GCAGCCGGGCG CTTCTCCCATTCCTT SeD_A3292 3168071 - 3167952 - | hypothetical protein SeD_A3293 3168520 - 3169809 + | serine transporter family protein TERM 4076 3169818 - 3169836 + F 90 -13.1 -3.61902 | CAGCTAAGTCCTTTA GCGCCGC TTACC GCGGCGC TTCTCTATGATACAA TERM 4077 3169975 - 3169940 - g 83 -10.4 -3.95584 | GTCGGACCAATGAAA GCAGGCAAGCAGTTCA CGGA CGATCTGATTGCCCGC CATATCCTTACAGAT TERM 4078 3170494 - 3170474 - g 86 -11.9 -3.83026 | overlap 3170477 GCTCTGCACAGTAAA GAAGCGCTG GAG CAGCACTTC GCCAGGGTCTGGGAG TERM 4079 3170491 - 3170477 - g 71 -7.8 -4.04806 | overlap 3170474 CTGCACAGTAAAGAA GCGCTG GAG CAGCAC TTCGCCAGGGTCTGG TERM 4080 3170647 - 3170623 - g 95 -14.3 -3.4252 | GGTCAGTCAGGATAA GACCACCACCG ATC CGATGGCGGTC GTCGACTGGATCAAT TERM 4081 3170716 - 3170734 + G 75 -11.7 -2.94726 | opp_overlap 3170693 3170728, overlap 3170712 3170709 3170733 CGGACGAGTAGTCAC TGCGCCG ACTAA CGGCGCA TGTGGTATTGTGCCG SeD_A3294 3169868 - 3171235 + | L-serine ammonia-lyase TERM 4082 3171262 - 3171290 + F 76 -7.5 -4.22375 | gap 2, opp_overlap 3171271, overlap 3171279 3171283 TTTTAGGATCTGTAG GCCGGATAAGGCG CTCGC CGCC--ATCCGGC TTTGTTGCCTGATGT SeD_A3295 3171405 - 3172160 + | hypothetical protein TERM 4083 3172143 - 3172160 + T 74 -5.5 -4.63932 | opp_overlap 3172137 GGAAACTTACAGCAG CTACGGC TGGC GCGGTAG TTTTGTTGCCGGATG fucO 3173400 - 3172252 - | lactaldehyde reductase TERM 4084 3172547 - 3172535 - G 77 -7.7 -4.2558 | GACCCGGCATTAAAA CGCAT CAC ATGCG GAAGCAAAATAGCAT fucA 3174064 - 3173417 - | L-fuculose phosphate aldolase TERM 4085 3173600 - 3173620 + g 76 -9.7 -3.8046 | overlap 3173607 3173608 ACAAGCGATAAGCCC GTGATGCTG TAA CAGCGTCGC TTTACGATTTTTAAG SeD_A3298 3174385 - 3174218 - | hypothetical protein SeD_A3299 3174593 - 3174471 - | hypothetical protein TERM 4086 3174855 - 3174865 + G 74 -6.8 -4.25104 | overlap 3174860 TTTCGTCATTCCAAT TCCC GCT GGGA TTTTGATGAAAAAGC fucP 3174619 - 3175935 + | L-fucose:H+ symporter permease TERM 4087 3175988 - 3175977 - g 85 -2.2 -5.52384 | overlap 3175978 3175980 CTGTCATGAAAAAAA TCAG CTTA CCGA AAATCGGTATCCGCC TERM 4088 3176119 - 3176100 - g 79 -7.8 -4.43844 | opp_overlap 3176100 TCATCACCGAGAAAA TGCGCCAC GCCT GTGGGGCA CAAGTGGAGTGCGTC TERM 4089 3176462 - 3176441 - g 74 -2.2 -5.07486 | gap 1 GACGTCGAAGAAAAA CTG-CTGCG TTTTG CGCGGGCAG GGTTAGCGGTAGCAA TERM 4090 3176693 - 3176677 - g 70 -3 -4.82901 | gap 1, overlap 3176679 GTGGGCGGATAAAAA CTTCCGC TACG GCG-AAG ATCAGAACGCCTCGC TERM 4091 3177122 - 3177083 - g 70 -10.1 -3.33261 | gap 3, opp_overlap 3177084 3177121, overlap 3177121 CCGGAAGCCGTAGAA CGCGTCACCGGCCAGG-CGC TCA GCGGCCTGGC-GG-AACACG GCATTATTCACCTGA fucI 3175967 - 3177742 + | L-fucose isomerase fucK 3177843 - 3179261 + | L-fuculokinase TERM 4092 3179561 - 3179589 + G 71 -5.9 -4.36914 | TAGAAGCGCCGTGCC CGGATATCGTTCG TAT CGACCGTTATGCG TTTTATGAGCGGGCG SeD_A3303 3179263 - 3179685 + | fuscose operon FucU protein TERM 4093 3179681 - 3179671 - f 76 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CGCC GTAATCTCTTGCCGG TERM 4094 3179699 - 3179717 + F 83 -13.1 -3.17212 | AATCTCTTGCCGGTG CGCCCGC ATGAC GCGGGCG TTCATCGAATGATGG TERM 4095 3180340 - 3180350 + G 75 -6.8 -4.51994 | overlap 3180327 ATCCTGCTCAGGCGT GCCT CGC AGGC TTTATTATTGATTGA SeD_A3304 3179743 - 3180453 + | L-fucose operon activator TERM 4096 3180462 - 3180508 + T 100 -15.3 -4.88736 | gap 2, opp_overlap 3180463, overlap 3180463 GTCATAGGCCGGATA AGCG-TGC-GTCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGCG TTTTTATCGCTCGTC TERM 4097 3180507 - 3180463 - T 100 -18.8 -3.30771 | gap 2, opp_overlap 3180463 3180462 TCATAGGCCGGATAA GCG-TGC-GTCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT TERM 4098 3180463 - 3180507 + T 100 -18.8 -3.52519 | gap 2, opp_overlap 3180463, overlap 3180462 TCATAGGCCGGATAA GCG-TGC-GTCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT SeD_A3305 3181612 - 3180512 - | hypothetical protein SeD_A3306 3182000 - 3181605 - | hypothetical protein TERM 4099 3181972 - 3181960 - G 100 -9.1 -4.94058 | overlap 3181962 GCAACGTAAATAAAA CCGCT GAT AGCGG CGACAATCAGCATAA gcvA 3182936 - 3182019 - | glycine cleavage system transcriptional activator TERM 4100 3182376 - 3182392 + g 83 -7.9 -4.67168 | overlap 3182391 CAATAACGTGTGTTT CGCCAGA TCT TCCGGCG TTTTTAACGGTTTTT TERM 4101 3182910 - 3182900 - G 74 -4.6 -4.77036 | opp_overlap 3182900 CGGCAGCATCAAAAA CGCG TAA CGCA TTTAAAGGAGGTAAT TERM 4102 3182968 - 3182996 + r 100 -7.5 -5.58454 | opp_overlap 3182968 3182972 GTCGAATGAATTTAA CAAATAGGTAACA ATA TGTAACCTATTAG TTTTTTTAATCTGAG TERM 4103 3182992 - 3182972 - R 74 -6.9 -4.26953 | opp_overlap 3182968, overlap 3182968 AATGAATTTAACAAA TAGGTAACA ATA TGTAACCTA TTAGTTTTTTTAATC TERM 4104 3183261 - 3183242 - R 70 -10.7 -2.57423 | opp_overlap 3183242 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC TERM 4105 3183242 - 3183261 + r 100 -10.7 -6.02914 | opp_overlap 3183242 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC SeD_A3309 3183510 - 3183283 - | putative lipoprotein TERM 4106 3183964 - 3183950 - g 78 -2.1 -5.14563 | CGCCCGATGAAAAAA GTATC GTCTG GACAC GCGGCACCACCGAAG csdA 3183703 - 3184908 + | cysteine desulfurase, catalytic subunit CsdA SeD_A3311 3184908 - 3185351 + | chain A, Northeast Structural Genomic Consortium Target Er75 TERM 4107 3185866 - 3185886 + G 76 -3.3 -4.99645 | GATCGCCGGACTTTT GATGATTGT ATC ATGGTCATC TTTTATTTATGCGCT rarD 3185624 - 3186538 + | RarD protein SeD_A3313 3187396 - 3186590 - | ThiF family protein TERM 4108 3187093 - 3187106 + g 71 -9.5 -3.51708 | overlap 3187090 CATCGATAACCGTTA CCCGG CACT CCGGG TTAATTTGCCGAATC TERM 4109 3187303 - 3187327 + g 78 -7 -4.59773 | opp_overlap 3187302 CCACGACGCAGATAT GCGCCTCAGC AAACC GCTGCAGCGC TTTTTCACCGTACAG TERM 4110 3187435 - 3187417 - H 100 -10.3 -5.88565 | CTCAGAATAAAAAAA GGTGAGG TTATT CCTCACC CCTGCTCACTATTTT TERM 4111 3187528 - 3187540 + H 78 -6.2 -4.56597 | opp_overlap 3187509, overlap 3187528 3187527 CTAAACACGTTACCG GCGC CCGGC GCGC TTTTTAACACCCAGA TERM 4112 3188144 - 3188165 + H 73 -8 -4.08945 | gap 1 CTGCGTAGATCTGAG CGCGGGACG GTAAG CGTCC-GCG TTTTGGCGGCATACT TERM 4113 3188514 - 3188531 + H 83 -9.1 -4.25104 | CCCGTCCTTATATTG CTGACCG CGAT CGGTCGG TTTTGATGAACAGGC TERM 4114 3189004 - 3189017 + H 100 -8.1 -5.77988 | opp_overlap 3189004 AACCAACTTAATGAA CACCC TTAC GGGTG TTTTTTTGTATCTGT TERM 4115 3189970 - 3189958 - H 72 -9.1 -3.54129 | CAGACGTTCTTTAAA GCCTG CCA CAGGC GCCAGCGCAAATAGC TERM 4116 3190506 - 3190494 - H 78 -5.5 -4.73613 | GCATTACTAAGAAAA GCGAT CGG ACCGC ATAAAATTTACGCTT argA 3190589 - 3191920 + | amino-acid N-acetyltransferase TERM 4117 3192001 - 3191989 - T 70 -9.1 -3.30124 | TTGGAGGCCGGATAA GACGC TAC GCGTC GCCATCCGGCGAGAA recD 3193858 - 3192023 - | exodeoxyribonuclease V, alpha subunit TERM 4118 3193002 - 3192982 - G 76 -3.2 -5.07486 | gap 1, overlap 3192985 3192986 GATCGCCAAGAAAAA TGAC-CCGC CCGT GCGGCGGCA GAGCGTCAATCAAAC recB 3197400 - 3193855 - | exodeoxyribonuclease V, beta subunit TERM 4119 3194100 - 3194083 - G 72 -11.3 -3.01497 | overlap 3194078 GTACTGCAAATCATA GCGATGC GCCT GCATCGC CGTAGCCATCGCCGC TERM 4120 3196359 - 3196371 + g 100 -10.5 -4.72272 | opp_overlap 3196351, overlap 3196353 CGTCAAACCCCAGCT CGCCG CGC CGGCG TTTTTCCTGAGCCAC TERM 4121 3196482 - 3196503 + g 83 -12.3 -3.74693 | gap 1 CGACAAACAATGGGT GCTGG-GGCG TCA CGCCGCCAGC TTTGGTGCGCTCAGC TERM 4122 3196547 - 3196526 - G 82 -5.1 -5.08824 | opp_overlap 3196541, overlap 3196538 CGCTCAGCTAAAAAA CGCTGTGAA AATT TTCCCAACG CCTCGGGTAATTGAT TERM 4123 3196880 - 3196852 - G 70 -8.8 -3.63627 | gap 1 CTTCCACACGTCAAA CACCACCTGCGCG ATGT CGCGC-GGCAGCG GATAGCAATGACGCC TERM 4124 3197367 - 3197345 - G 71 -8.4 -3.90588 | GATGCTTCAATCAAA CGCTCGCC TGTAAGG GGCAAGCG CAGAGGATCAAGAGT SeD_A3321 3200281 - 3197393 - | protease 3 TERM 4125 3198099 - 3198115 + g 71 -4.3 -4.62302 | opp_overlap 3198092 3198089, overlap 3198101 CGACACCACGCCGAT CCGTTCG CCG CGAGCTG TTTTTGGACATCTTG TERM 4126 3198940 - 3198950 + g 81 -6.8 -4.72272 | TCTGCGGCGTCATCA TCGC CAG GCGA TTTTTGATAGCGGCA TERM 4127 3199966 - 3199981 + g 100 -7.6 -5.40474 | overlap 3199957 GGTATTCGGCAAGGC TATCCG CCTG CGGATA TTTTTTTGACCCCAT TERM 4128 3200366 - 3200382 + r 88 -3.7 -5.64274 | AACGGGATATTATTG TGCTG AACCAGG CAGCA TTTTTTTATCAGTAA recC 3203830 - 3200459 - | exodeoxyribonuclease V, gamma subunit TERM 4129 3200851 - 3200839 - G 73 -9.1 -3.90048 | overlap 3200837 CTTTGCGCAAAAACA GGCGA CTT TCGCC ACTCCCGCCGCTGGC TERM 4130 3201719 - 3201730 + g 72 -3.6 -4.68593 | overlap 3201686 GCGACGGCTACGATC CCCG CGCA TGGG TTTTTGGCTCATCAG TERM 4131 3202552 - 3202528 - G 72 -12.1 -2.60823 | overlap 3202524 3202532 AAATGGCATAAGGCA GATAGCGCTCC GTT GGCGCGCTACC AAACACCGCCTGGAT TERM 4132 3202858 - 3202874 + g 70 -6.5 -4.19506 | opp_overlap 3202858 3202857 3202860, overlap 3202861 TAATATCAACAAACG CATCCAG CTC CTGGCTG TTTTCCAGTTCAGAT TERM 4133 3203659 - 3203649 - G 74 -6.8 -4.27316 | GCCGGTAACGGAAAA GCGA TAT TCGC CGCAATACCAAACTT ppdC 3204166 - 3203846 - | prepilin peptidase-dependent protein C SeD_A3324 3204558 - 3204151 - | hypothetical protein TERM 4134 3204436 - 3204411 - G 80 -11.8 -3.32844 | GCGCCGACTGTACAA GCGCCTGGCG TTGTAT CGCCAGGCTC TGCGTCGTCACGCGG SeD_A3325 3205118 - 3204555 - | prepilin peptidase dependent protein B SeD_A3326 3205579 - 3205109 - | prepilin peptidase dependent protein A TERM 4135 3205285 - 3205253 - G 83 -14.9 -2.77569 | overlap 3205245 3205244 3205278 AAAGAAGGCTAACGA CGGCGTGATATCGGC AAG GACGACATCACGCCA GTCGGGCGTAAACAC TERM 4136 3205742 - 3205723 - g 100 -7.1 -5.81032 | opp_overlap 3205723 GAAGGGTAAAAAAAA CCGACGC GCAATG ACGTCGG TTATGGCAGGATCGT SeD_A3327 3205628 - 3205771 + | hypothetical protein thyA 3206558 - 3205764 - | thymidylate synthase TERM 4137 3206136 - 3206115 - G 76 -5.1 -4.75063 | gap 1, opp_overlap 3206124 3206125 ATAAAACTGGAAAAA GGCG-TGACA CGG CGCCAGCGCC ATCTTATCCAGCTCG lgt 3207440 - 3206565 - | prolipoprotein diacylglyceryl transferase TERM 4138 3207066 - 3207055 - G 71 -4.4 -4.64334 | AACGGCGCAATAAAA TCAG ACAC CTGA AAGAACGAGCGCTTC TERM 4139 3207514 - 3207490 - R 70 -9.2 -3.37354 | overlap 3207479 GATAGCGATTGATAA GCGCGCCTGC GCGTT GCAGACGCTC CAAAGGTGCGAATAA ptsP 3209902 - 3207656 - | phosphoenolpyruvate-protein phosphotransferase TERM 4140 3209214 - 3209182 - G 83 -6.1 -4.85129 | opp_overlap 3209209 3209211, overlap 3209184 AGTACAGATCAAAAA TGGCCGCCGTCTC TTTTTGC GCGCCGGCGGCAA AGCGTTTGCTGTATC nudH 3210445 - 3209915 - | (Di)nucleoside polyphosphate hydrolase SeD_A3332 3210967 - 3211092 + | hypothetical protein mutH 3211128 - 3211823 + | DNA mismatch repair endonuclease MutH TERM 4141 3212365 - 3212353 - g 71 -7.7 -3.97139 | opp_overlap 3212352 GAAGGCGAAGAAGAA GGGTT AAA AACCC GGGTTTCTTCTTTCC SeD_A3334 3212005 - 3212718 + | protein YegH SeD_A3335 3212888 - 3213106 + | hypothetical protein TERM 4142 3213387 - 3213377 - g 71 -4.6 -4.63486 | overlap 3213379 ATTTGGTGAACAAAA CAGC GAA GCCG ACGCTCACGCACAGC SeD_A3336 3213297 - 3214337 + | protein tas SeD_A3337 3215626 - 3214424 - | lysophospholipid transporter LplT TERM 4143 3214937 - 3214920 - G 73 -6.3 -4.49311 | gap 1, overlap 3214924 AGCACCAGCAGAAAA CGCAGCGT CAC AC-CTGCG CCCCAGAATAGCCCG SeD_A3338 3217778 - 3215619 - | bifunctional protein aas TERM 4144 3216020 - 3216030 + g 77 -8.2 -4.13767 | AGCCGCGCTCGGTTT CGCC TCT GGCG TTTTCCGCTGACGGC TERM 4145 3217877 - 3217894 + rH 81 -12.7 -3.14132 | opp_overlap 3217877 AGGTTCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4146 3217894 - 3217877 - RH 100 -12.7 -5.75945 | opp_overlap 3217877 AGGTTCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4147 3218098 - 3218079 - RH 100 -10 -6.4753 | opp_overlap 3218079 CGAAACAAAAAAAAA CCTGCGCA TCTC TACGCAGG TTGGTGTAATTCGTG SeD_A3343 3218381 - 3218247 - | hypothetical protein TERM 4148 3218474 - 3218452 - gH 74 -7.6 -4.10429 | overlap 3218439 AACGATTCGCCAAAA GCCAGCGAAG CGT CCCGGCTGGC GGTGACCAGCGCAAT SeD_A3342 3218371 - 3219399 + | HTH-type transcriptional regulator GalR TERM 4149 3219533 - 3219504 - g 74 -4.3 -4.68908 | gap 1 GGCAGGTAAAAGAAA GCACGCGCCAGAAA GTG TTTACGGCG-ATGC AGGCTCTGGGCTATC TERM 4150 3219644 - 3219670 + G 74 -10 -3.72576 | overlap 3219645 TATTTCGGCAGTTTG TTGCGCCGGGCG TCG CGCCAGGCGGAG TTTCATAACAAGCAG SeD_A3344 3219413 - 3220432 + | HTH-type transcriptional regulator AscG lysA 3221704 - 3220442 - | diaminopimelate decarboxylase SeD_A3346 3221822 - 3222757 + | transcriptional activator protein LysR SeD_A3347 3223436 - 3222729 - | aspartate racemase SeD_A3348 3224967 - 3223549 - | L-arabinose/proton symport protein TERM 4151 3224128 - 3224118 - G 78 -6.8 -4.62069 | overlap 3224101 CGGCCATTTTAAAAA TGCG CGG CGCA TAGTACATAATGATG TERM 4152 3225259 - 3225242 - R 93 -7 -5.69473 | opp_overlap 3225241 3225242 GAGATCATAAAAAAA CCCTGT ACGAGG ACAGGG CTTTATCAGTTTTTT kduD 3226082 - 3225321 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 4153 3225932 - 3225910 - G 76 -2.7 -5.03314 | overlap 3225913 GTCAGGCTTAAAAAA CGACGTC-CCA GTG CGGTGACG-CG CGCAATAGTGTCCGT kduI 3226975 - 3226139 - | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase SeD_A3351 3227136 - 3226966 - | hypothetical protein TERM 4154 3227015 - 3227031 + g 83 -8.1 -4.41616 | opp_overlap 3227015 CGCAATGGCATAAAA TCAAAAC ACT GTTTTGA TTTATTTAACGGCAT TERM 4155 3227031 - 3227015 - G 83 -8.1 -4.42788 | opp_overlap 3227015 CGCAATGGCATAAAA TCAAAAC ACT GTTTTGA TTTATTTAACGGCAT TERM 4156 3227150 - 3227188 + r 81 -13.2 -2.70275 | opp_overlap 3227151 3227155, overlap 3227147 ACGAACGGCGCTAAA ACTTACGCACATGTCTGA TTT TCAGACATGTGCGCCAGA TGCTGTATGCGGTTA TERM 4157 3227187 - 3227151 - R 100 -18.9 -4.09739 | opp_overlap 3227150 3227147, overlap 3227155 CGAACGGCGCTAAAA CTTACGCACATGTCTGA TTT TCAGACATGTGCGCCAG ATGCTGTATGCGGTT TERM 4158 3227183 - 3227155 - R 100 -20.5 -2.74605 | opp_overlap 3227150 3227147, overlap 3227151 CGGCGCTAAAACTTA CGCACATGTCTGA TTT TCAGACATGTGCG CCAGATGCTGTATGC TERM 4159 3227340 - 3227357 + r 88 -8.4 -4.83169 | TCTGTCACTGGCTTT GCCCTC GTGATA GAGGGC TTTTTATGACGGAAT SeD_A3352 3228613 - 3227405 - | acetyl-CoA acetyltransferase TERM 4160 3227766 - 3227753 - G 71 -9.5 -3.54424 | overlap 3227754 GCCGACGCTGGCAAA CGCGC GGAT GCGCG CCAGCACCGGCAGCC TERM 4161 3227918 - 3227882 - G 71 -8.6 -3.89412 | gap 1, opp_overlap 3227911 ACCTAAACTATCAAA CGCCGGATGCAGCAGGG CTAA CCCCTCCGCA-CTGGCG TCGGCCCGCGGTTGT TERM 4162 3228671 - 3228658 - R 76 -2.4 -5.41143 | GATTGTTTAAAAAAA GTGA GTTTTA TCAC AAAGGAAATGACGCT SeD_A3353 3229569 - 3228706 - | transcriptional regulator, LysR family TERM 4163 3228814 - 3228828 + g 73 -5.6 -4.56597 | overlap 3228816 CCAGCCAGGAACATC CAGCTG CGC CAGCGG TTTTTCCGCCGCAAA SeD_A3354 3229673 - 3230128 + | transmembrane pair domain protein SeD_A3355 3230125 - 3230253 + | hypothetical protein SeD_A3356 3230270 - 3231499 + | inner membrane transport protein YqeG TERM 4164 3231534 - 3231507 - T 90 -9.9 -4.54727 | opp_overlap 3231509, overlap 3231509 TCGGCTAAAGTAAAA GATAGCCGGGA TATAAC TCCCGGCTATT TTATATAAGAATCCA TERM 4165 3231509 - 3231532 + T 100 -12.5 -4.53303 | opp_overlap 3231509 3231507 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC TERM 4166 3231532 - 3231509 - T 95 -12.5 -3.88396 | opp_overlap 3231509, overlap 3231507 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC SeD_A3357 3231802 - 3231530 - | YohL TERM 4167 3232594 - 3232618 + G 74 -8.5 -3.93038 | GCTTAAAGCGTTTAC GCTGGGCGCCA CTA TGGTGCTGAGC TTTAGTCTTGGCCTG SeD_A3358 3231923 - 3232807 + | nickel/cobalt efflux system RcnA SeD_A3359 3233775 - 3233017 - | hypothetical protein TERM 4168 3233515 - 3233503 - G 71 -4.8 -4.56597 | CCGGTCGCTGAAAAA CAGC TCATC GCTG ATAATCATAACCGGG SeD_A3360 3234274 - 3233762 - | hypothetical protein SeD_A3361 3235494 - 3234418 - | putative outer membrane protein TERM 4169 3234478 - 3234491 + g 74 -9.5 -3.73088 | TGTCTTTACACTTCC CCCCG GGGT CGGGG TTATTACTGCAGTAT SeD_A3362 3236234 - 3235491 - | pili assembly chaperone protein SeD_A3363 3238764 - 3236275 - | fimbrial usher protein TERM 4170 3238854 - 3238829 - R 72 -4.7 -4.61868 | opp_overlap 3238829 CAGTCAGATATAAAA GCCGTCC GATCCCCTCCGT GGACGGC TTCTCCCTGTCGTTA SeD_A3364 3239465 - 3238884 - | probable fimbrial protein TERM 4171 3239693 - 3239677 - R 86 -5.1 -5.4593 | opp_overlap 3239681 3239685 3239691, overlap 3239679 3239681 TTAAAACAATAAAAA TAGATCG ATA CGATCGA TGATTATGATCGTAA TERM 4172 3239691 - 3239679 - R 76 -7.7 -4.32946 | opp_overlap 3239681 3239685, overlap 3239677 3239681 AAAACAATAAAAATA GATCG ATA CGATC GATGATTATGATCGT SeD_A3365 3240816 - 3240184 - | YfdX protein TERM 4173 3240399 - 3240414 + g 90 -4.6 -5.42131 | CGCCTGCTAGTTTCA GGGCCT CTAT AGTCCC TTTTTTATCTCCTTC SeD_A3366 3241399 - 3240863 - | outer membrane protein SeD_A3367 3241630 - 3241445 - | hypothetical protein TERM 4174 3241997 - 3241977 - R 100 -11.9 -5.99154 | opp_overlap 3241980 CAGGAAACAAAAAAA GAAGGGAGC GGT ACTCCCTTC GTAAACATGTCAGAA SeD_A3368 3242608 - 3242207 - | putative virulence-associated protein TERM 4175 3242502 - 3242476 - G 83 -12.4 -3.62096 | TTTCAGCACCGTAAA TCAGCTCCATTA AGG TGATGGAGCTGA TACACATTCGGGATG SeD_A3369 3242832 - 3242605 - | putative virulence-associated protein TERM 4176 3242847 - 3242869 + rH 70 -9.3 -3.35679 | TAACTGCCTCCTTTC TGGATATAC AACGC GTATATCCA TTATGAGTAGAGGCG SeD_A3371 3243619 - 3243407 - | hypothetical protein TERM 4177 3244213 - 3244186 - gR 79 -4.1 -5.12617 | GAACCACCTAAAAAA CGGGGATTATA TCGGTG TCTACTCCCCG CTTGACGGGCTGGAC SeD_A3370 3243578 - 3244378 + | putative inner membrane protein SeD_A3373 3245415 - 3244663 - | YgeR TERM 4178 3245103 - 3245120 + g 72 -4.1 -4.76123 | opp_overlap 3245089, overlap 3245087 3245102 ATGACGGTCTGACCG CAGCAGT TTTT GTTGCTG TTTTATTGCTGGTTT SeD_A3374 3245501 - 3245635 + | hypothetical protein TERM 4179 3245641 - 3245664 + F 84 -8.1 -4.67038 | opp_overlap 3245641 GATCGTCTGAGTATA TGGCCTGGC CATGCT GCCGGGTCA TTTTAATTTTCAGGA TERM 4180 3245865 - 3245854 - g 71 -5.8 -4.24342 | TCGCTGAGCAAGAAA GCCT GGCC AGGC GTGTGGACGAATTCG idi 3245686 - 3246231 + | isopentenyl-diphosphate delta-isomerase TERM 4181 3246260 - 3246306 + T 74 -8.2 -3.90744 | gap 3, opp_overlap 3246263 3246265 3246267, overlap 3246266 3246267 GCGCTACGTCTGAAC GAAG-AGA-TGCCGGATGGCGGC TAAT GCC-CCATCCGGCAATTTACATC TTATTTCACCGGACG TERM 4182 3246299 - 3246265 - T 74 -10.7 -3.24032 | gap 1, opp_overlap 3246260 3246266 3246267, overlap 3246263 3246267 ACGTCTGAACGAAGA GATGCCGGATGGCGGC TAAT GCC-CCATCCGGCAAT TTACATCTTATTTCA TERM 4183 3246266 - 3246298 + T 100 -14.2 -3.82865 | gap 1, opp_overlap 3246265 3246263 3246267, overlap 3246260 3246267 CGTCTGAACGAAGAG ATGCCGGATGGCGGC TAAT GCC-CCATCCGGCAA TTTACATCTTATTTC TERM 4184 3246267 - 3246297 + T 100 -17.7 -2.88634 | gap 1, opp_overlap 3246265 3246263 3246267, overlap 3246266 3246260 GTCTGAACGAAGAGA TGCCGGATGGCGGC TAAT GCC-CCATCCGGCA ATTTACATCTTATTT TERM 4185 3246297 - 3246267 - T 100 -17.7 -3.18366 | gap 1, opp_overlap 3246267 3246266 3246260, overlap 3246265 3246263 GTCTGAACGAAGAGA TGCCGGATGGCGGC TAAT GCC-CCATCCGGCA ATTTACATCTTATTT lysS 3247824 - 3246307 - | lysyl-tRNA synthetase LysS TERM 4186 3247892 - 3247929 + r 72 -8.6 -3.72893 | overlap 3247890 3247893 CTACCGTCCAGTACC G-CCTGTGTATTGCGGGT TTCC ACCC-CAGTACGCAGGTC TTTAATGCGGGAATC TERM 4187 3247893 - 3247927 + r 85 -12.3 -3.44848 | gap 1, overlap 3247890 3247892 TACCGTCCAGTACCG CCTGTGTATTGCGGGT TTCC ACCC-CAGTACGCAGG TCTTTAATGCGGGAA TERM 4188 3248743 - 3248757 + r 71 -7.1 -4.07885 | overlap 3248724 ATCGACGATCGCTTC GAGCG ATGAA CGCTC TTTTCCCAGCGCCTG TERM 4189 3248925 - 3248939 + r 72 -2.8 -4.96996 | TTCACCGGGTTAATT TCAAAC ATG GTCTGA TTTCTTTTATTTGAC TERM 4190 3249000 - 3248975 - R 70 -9.1 -3.30903 | opp_overlap 3248975 3248974 AAAATGCGGTTATAA GGGCGAAAT ATTAGCGG ATTTCGCCC CTTAATTACAGCGAA recJ 3250770 - 3249037 - | single-stranded-DNA-specific exonuclease RecJ TERM 4191 3250137 - 3250109 - G 71 -9.6 -3.5393 | gap 1 AGCAGCTCCGCCAAA TTCGGCG-GCGCA ATGT TGCGCTCGTCGAA CCATCCTTTGTCGCG SeD_A3379 3251489 - 3250776 - | thiol:disulfide interchange protein DsbC TERM 4192 3250972 - 3250985 + g 77 -3.8 -5.0707 | overlap 3250979 CCCTTACCTGCCATG GCGT CATCAA ACGC TTTGTTTTTGTCTTT TERM 4193 3250979 - 3250989 + g 81 -4 -5.19879 | overlap 3250972 CTGCCATGGCGTCAT CAAA CGC TTTG TTTTTGTCTTTGGCG xerD 3252409 - 3251513 - | tyrosine recombinase XerD SeD_A3381 3252465 - 3253043 + | flavodoxin TERM 4194 3253067 - 3253099 + T 80 -12.8 -3.0752 | gap 1, opp_overlap 3253077, overlap 3253077 TCGCTGTACTTCCCT CTCGACGGAACCGCG TTTA CGCCGTTCCGTC-AG TGTTGACCTGATATC SeD_A3382 3253509 - 3253096 - | putative inner membrane protein SeD_A3384 3253756 - 3253490 - | TPR repeat protein SeD_A3383 3253755 - 3253991 + | hypothetical protein TERM 4195 3254575 - 3254560 - g 70 -9 -3.73336 | opp_overlap 3254557, overlap 3254562 AGCCGAACTGAATAA CAGCCA ACAG TGGCTG GCATTGGATATTGAA SeD_A3385 3254006 - 3254986 + | tRNA-modifying protein YgfZ TERM 4196 3255042 - 3255000 - T 83 -9.9 -4.16279 | gap 2, opp_overlap 3254998 3255000 3255002 GATATCACGTTAAAA GC-CG-GATAGCCTGATAGCG CAA CGCCATCAGGCTCGCACGTGC TGTTCTCGTAGGCCG SeD_A3386 3255761 - 3255102 - | hemolysin-3 TERM 4197 3255589 - 3255572 - G 80 -4.8 -5.10461 | TTGAGGCAAGAAAAA GCAGGA TCATGC TCCCGC CATATAAACTGTAGC TERM 4198 3255856 - 3255872 + r 74 -8.1 -3.97307 | opp_overlap 3255855 3255853 GCTAAAAATAAATTC GCAAAAT TGA ATTTTGC TTATTATTCAATAAG SeD_A3387 3256237 - 3255923 - | protein YqfB SeD_A3388 3256392 - 3257825 + | 6-phospho-beta-glucosidase BglA TERM 4199 3257833 - 3257860 + T 75 -9.8 -3.55548 | overlap 3257834 3257851 AGCTTTAACCCCTGC ACGTTACCCGCC AGTC GGCGGGTAACAC TTTGAACGAGTCTTA TERM 4200 3257834 - 3257859 + T 81 -13.3 -2.73007 | overlap 3257833 3257851 GCTTTAACCCCTGCA CGTTACCCGCC AGTC GGCGGGTAACA CTTTGAACGAGTCTT SeD_A3389 3258766 - 3257873 - | putative outer membrane protein TERM 4201 3258054 - 3258067 + g 78 -2.3 -5.26875 | TGGTTATTAATTACG CTGCC ATTA GACAG TTTTTTCGTTCCAGA TERM 4202 3258444 - 3258460 + g 70 -5.1 -4.5032 | overlap 3258445 CCCTCTATGTGCTCA GGAGACA GAT TGTCTCG TTTGTTATTGATATA TERM 4203 3259003 - 3258987 - R 71 -3.7 -4.76892 | overlap 3258991 ACAGCAAGGTAAAAA TGATGCA CAA TGAATCA TTAGGCTCTAAAAAA TERM 4204 3259183 - 3259196 + r 75 -9.5 -3.53444 | opp_overlap 3259183 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAAACAGTCG TERM 4205 3259196 - 3259183 - R 87 -9.5 -4.24123 | opp_overlap 3259183 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAAACAGTCG gcvP 3262095 - 3259222 - | glycine dehydrogenase gcvH 3262647 - 3262258 - | glycine cleavage system H protein gcvT 3263767 - 3262673 - | glycine cleavage system T protein TERM 4206 3263734 - 3263709 - G 71 -6.1 -4.28548 | gap 1, opp_overlap 3263710 3263722, overlap 3263710 3263713 ATCCAGCCATGAAAA TCGACCATGCGG GCG CCGCATAG-CGT GTGTTGTTCGTACAA SeD_A3393 3263808 - 3263948 + | hypothetical protein SeD_A3394 3265425 - 3264223 - | protein VisC TERM 4207 3264951 - 3264975 + g 77 -8.6 -4.13767 | gap 1, opp_overlap 3264953, overlap 3264969 CCGCGGCAATCACCA GAC-GCGCGGT TAAC ATCGCGCCGTC TTTTAAAGTCAGGAA ubiH 3266729 - 3265551 - | 2-polyprenyl-6-methoxyphenol 4-hydroxylase pepP 3268042 - 3266726 - | Xaa-Pro aminopeptidase TERM 4208 3267991 - 3267971 - G 75 -12.5 -2.60496 | opp_overlap 3267970 3267970 3267973, overlap 3267970 3267968 3267973 CGGCGCGGCAAAGAT CAGCGCGGC GCT GCCGGGCTG CATTTGCGCCAGTAA TERM 4209 3268042 - 3268060 + r 85 -3.8 -5.5353 | overlap 3268043 ATTCCTGCTGAGTCA TGACATGG CCT CCATTTCG TTTTTTCTTAGTGTA SeD_A3397 3268646 - 3268068 - | YecA family protein TERM 4210 3268326 - 3268314 - G 77 -4.8 -4.87291 | GAGGCCAAGCAAAAA GTGG TTAAC CCAC CCGGCTAAGGCATCT TERM 4211 3268410 - 3268394 - G 70 -2.9 -4.72486 | opp_overlap 3268398, overlap 3268398 3268400 GATAAAGCTGAAAAA GAAAGCC GTC GTCTTCC AGCGCGTCGCTGGTC TERM 4212 3268434 - 3268398 - G 80 -5 -4.88293 | opp_overlap 3268398 3268413, overlap 3268394 3268400 AAGCTGAAAAAGAAA GC-CGTCGTCTTCCAGCG CGT CGCTGGTCGCCG-CGTGC ATTTTGCGCAGCGCC TERM 4213 3269031 - 3269020 - g 72 -3.6 -4.77157 | overlap 3269027 3269028 TTAACTCAGGAAAAA GCGA AGAC CCGC GATTACGCGGCGAGC SeD_A3398 3268969 - 3269142 + | hypothetical protein SeD_A3400 3269388 - 3269984 + | 5-formyltetrahydrofolate cyclo-ligase TERM 4214 3270353 - 3270332 - T 78 -11.6 -3.0955 | opp_overlap 3270332, overlap 3270330 3270329 AAACCAGAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGAGGAAATTAG TERM 4215 3270332 - 3270353 + T 86 -11.6 -3.54459 | opp_overlap 3270332 3270330 3270329 AAACCAGAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGAGGAAATTAG serA 3271597 - 3270365 - | phosphoglycerate dehydrogenase TERM 4216 3273088 - 3273062 - g 80 -9.5 -3.92592 | gap 2 AGGTGGAAGATGAAA CGCGCACGCAAGA ACG TCT-GCG-GCGCG GCGAGGTGGTGGGCG SeD_A3404 3272677 - 3273570 + | chromosome initiation inhibitor SeD_A3405 3273646 - 3273771 + | hypothetical protein TERM 4217 3273830 - 3273805 - T 75 -6.7 -4.39828 | overlap 3273806 3273807 AACACCGGGAGAAAA TGCGGCCTGGA AGCG CCCAGGCCGGG CGAGATTACTGCGTG TERM 4218 3273829 - 3273806 - T 74 -10.2 -3.23174 | overlap 3273805 3273807 ACACCGGGAGAAAAT GCGGCCTGGA AGCG CCCAGGCCGG GCGAGATTACTGCGT TERM 4219 3273828 - 3273807 - T 83 -13.7 -2.53422 | overlap 3273806 3273805 CACCGGGAGAAAATG CGGCCTGGA AGCG CCCAGGCCG GGCGAGATTACTGCG SeD_A3406 3274582 - 3273836 - | actin TERM 4220 3274403 - 3274427 + g 83 -12.8 -3.19371 | overlap 3274400 GGCCTGCTTCTTCGC CGTCGCCGCG TCCTT CGCCGCGACG TTCACTTCAATCGCT SeD_A3409 3276371 - 3275511 - | chain G, Mechanosensitive Channel Of Small Conductance TERM 4221 3275633 - 3275644 + g 71 -5.8 -4.25104 | CCCAGTAGACATTTT GCAG GTCG CTGC TTTTACTCCAGACAC TERM 4222 3276584 - 3276565 - R 100 -12.2 -5.73339 | opp_overlap 3276565 ATAACGATAAAAAAA TGGCTTCC CAAG GGAAGCCA TTTCAATCAGCAGAC TERM 4223 3276565 - 3276584 + r 88 -12.2 -3.64703 | opp_overlap 3276565 ATAACGATAAAAAAA TGGCTTCC CAAG GGAAGCCA TTTCAATCAGCAGAC fbaA 3277683 - 3276604 - | fructose-bisphosphate aldolase TERM 4224 3277734 - 3277721 - R 72 -3.1 -5.00616 | gap 1, overlap 3277724 GGCTTTGGGAAAAAA CACGGG CCG CCC-TG AATGTCAGATCGGCG TERM 4225 3277781 - 3277755 - R 80 -9.5 -3.87373 | gap 1, opp_overlap 3277755 3277778, overlap 3277759 CAGATCGGCGATAAA TCAACGGGCAGG AATC CCTGCCCGT-AA CGATTACTTCTTAGC TERM 4226 3277778 - 3277759 - R 100 -15 -3.6053 | opp_overlap 3277755, overlap 3277755 TCGGCGATAAATCAA CGGGCAGG AATC CCTGCCCG TAACGATTACTTCTT pgk 3278948 - 3277785 - | phosphoglycerate kinase TERM 4227 3278544 - 3278564 + g 76 -3.2 -5.00616 | opp_overlap 3278544 GGCGTCCATCACGAA TACGTCAC ACAGG GCGGCGTA TTTTTTAGACAGCGC TERM 4228 3278572 - 3278588 + g 74 -4.3 -4.69559 | GCGGCGTATTTTTTA GACAGCG CTT CGTCGTC TTTCTTTTCGCCTTT TERM 4229 3278913 - 3278903 - G 72 -2.4 -4.87665 | opp_overlap 3278911 CCGCACGGATAAAAA CGCG TTT CCCG GCCAGATCCAGATCG epd 3280016 - 3278970 - | D-erythrose-4-phosphate dehydrogenase TERM 4230 3279627 - 3279614 - G 71 -4.5 -4.62069 | overlap 3279615 GGTTCACGCCAAAAA CGACG GTGG CGTCA AGATCGTTGCTGCCC SeD_A3413 3280390 - 3280815 + | hypothetical protein TERM 4231 3281052 - 3281084 + G 80 -12 -3.40299 | GGCTGCTTACCGACC CTATCGCTGCCGCG TTTGC CCCGGTAGCGATGG TTATCGGTCTGGTCG SeD_A3414 3280841 - 3281419 + | signal transduction histidine kinase, LytS SeD_A3415 3281420 - 3282127 + | ABC transporter permease protein TERM 4232 3282158 - 3282173 + G 71 -4.6 -4.55798 | TTCCGTCCGATGCGA CACGCC CGCC GGCATG TTTTGATTTCCACTA SeD_A3416 3282115 - 3282792 + | ABC transporter, ATP-binding protein TERM 4233 3283335 - 3283386 + G 83 -15.4 -2.53903 | gap 3, opp_overlap 3283348, overlap 3283345 3283345 3283348 3283367 CTGGCGACATGCCGG GCACGGG-GAAC-CAGCGTCGTGGC GATTA GCCATGACGCTGCGTTTACCCG-GC GTCATTTTTCACGGG TERM 4234 3283345 - 3283375 + G 79 -13.3 -2.72144 | opp_overlap 3283348, overlap 3283335 3283345 3283348 3283367 GCCGGGCACGGGGAA CCAGCGTCGTGGC GATTA GCCATGACGCTGC GTTTACCCGGCGTCA TERM 4235 3283345 - 3283376 + G 85 -13.1 -3.5393 | gap 1, opp_overlap 3283348, overlap 3283345 3283335 3283348 3283367 GCCGGGCACGGGGAA C-CAGCGTCGTGGC GATTA GCCATGACGCTGCG TTTACCCGGCGTCAT TERM 4236 3283348 - 3283372 + G 78 -13.6 -2.64155 | opp_overlap 3283348, overlap 3283345 3283345 3283335 3283367 GGGCACGGGGAACCA GCGTCGTGGC GATTA GCCATGACGC TGCGTTTACCCGGCG TERM 4237 3283367 - 3283390 + G 89 -8.8 -4.58663 | opp_overlap 3283348, overlap 3283348 3283345 3283345 3283335 CGTGGCGATTAGCCA TGACGCTGCG TTTA CCCGGCGTCA TTTTTCACGGGTGGT SeD_A3417 3282786 - 3283442 + | putative ABC-type cobalt transport system, ATPase component TERM 4238 3283466 - 3283447 - T 100 -15 -5.56673 | opp_overlap 3283447 AGGGAGAATAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCGTATTA TERM 4239 3283447 - 3283466 + T 100 -15 -4.42619 | opp_overlap 3283447 AGGGAGAATAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCGTATTA tktA 3285477 - 3283486 - | transketolase TERM 4240 3284573 - 3284583 + g 74 -8.2 -3.9392 | CATGCGGATTCTTTC GCCG GGC CGGC TTCTTTCGCATCCCA TERM 4241 3284657 - 3284715 + g 83 -9.5 -4.15044 | gap 2, overlap 3284654 3284658 CAGCCCAACTGTTCG C-GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCCTG TTTGTTCGGCGAACC TERM 4242 3284658 - 3284713 + g 89 -13.2 -3.6761 | gap 1, overlap 3284654 3284657 AGCCCAACTGTTCGC GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCC TGTTTGTTCGGCGAA TERM 4243 3285948 - 3285937 - R 72 -5.8 -4.38313 | overlap 3285930 3285938 ACAGCAAAGCGAAAA TCGC GCCG GCGA GCAGCGAATACGCTA TERM 4244 3286463 - 3286483 + r 73 -11.1 -2.62184 | opp_overlap 3286475 CCCGGCGTCCGCCGC ACGCGCACA GCA TGTGCGCGA TCGTATGAGCGCGGA speB 3287532 - 3286612 - | agmatinase TERM 4245 3287187 - 3287199 + g 71 -4.8 -4.59773 | AGAGCATACGCTTGC CTGC AGACA GCAG TTTTTCAGCGTGCGC TERM 4246 3287598 - 3287566 - R 100 -12.7 -5.80817 | opp_overlap 3287566 3287560 GTCAATATAAAAAAA CCCTCCCGCGTCG TTAGGCC CGACGAGGAAGGG TTTGAATTTGTTTAC TERM 4247 3287566 - 3287598 + r 84 -10.5 -3.96542 | opp_overlap 3287566, overlap 3287560 GTCAATATAAAAAAA CCCTCCCGCGTCG TTAGGCC CGACGAGGAAGGG TTTGAATTTGTTTAC SeD_A3421 3288627 - 3287737 - | putative hydrolase or acyltransferase TERM 4248 3288613 - 3288600 - G 78 -2.5 -5.20333 | TATTGATAATAAAAA TAAAT TCTA ATTTA AAAATATGATTCATA TERM 4249 3288628 - 3288618 - G 72 -4 -4.74504 | ATTCTAATTTAAAAA TATG ATT CATA ACACCTCGCCAATCA TERM 4250 3288795 - 3288763 - R 100 -11.3 -4.79756 | opp_overlap 3288742 TACAGAACGTAAAAA GCCTTTCCGCGATTA GCC TCAACGCGAAAAGGC TCTGAAGTCAGAAAA SeD_A3422 3289380 - 3288886 - | putative mannitol dehydrogenase TERM 4251 3289972 - 3289962 - R 74 -8.2 -3.86897 | overlap 3289963 GTTAGTCCCCAGAAA GCGC TCC GCGC CGCCATACGGCGCAA SeD_A3425 3291456 - 3290440 - | hypothetical protein SeD_A3426 3292931 - 3291459 - | D-mannonate oxidoreductase TERM 4252 3292319 - 3292339 + g 74 -6.7 -4.26903 | opp_overlap 3292318 GCGGATCGAGATTAT CGGCAAACG TAA CGATCGCCG TTTTGGTCAAATGAC TERM 4253 3293213 - 3293201 - R 76 -4.9 -4.81734 | AAACACCATGAAAAA CAATA CCT TATTG AATAGCACGCCCGCT TERM 4254 3293504 - 3293494 - R 72 -5.4 -4.42806 | GCACGTTGAAACAAA GCTT TCA AAGC CCCTCTGGCCAAGGT SeD_A3428 3294903 - 3294154 - | Uxu operon transcriptional regulator TERM 4255 3294182 - 3294209 + g 71 -4.2 -4.58663 | gap 1, opp_overlap 3294176 3294182 AAAAAATCATCAAAA TCTTCCAGC-GAA TCA TCCTGTTGGAAGA TTTTTACCAGCTCAT SeD_A3429 3295839 - 3295108 - | putative outer membrane lipoprotein TERM 4256 3295964 - 3295937 - R 100 -15.8 -4.94487 | TTATAAAATATAAAA GGGTCGATTTAA ATAA TTAAATCGACCC ACAAGCGGAATACTC speA 3297882 - 3295984 - | arginine decarboxylase TERM 4257 3297101 - 3297086 - G 77 -8.2 -4.21142 | overlap 3297087 AGCTCAACATAGAAA CGCGCG GACT CGCGCA CGCCGGTCGCGATAT SeD_A3431 3298100 - 3297969 - | hypothetical protein TERM 4258 3298176 - 3298159 - H 75 -6.3 -4.52703 | opp_overlap 3298171, overlap 3298149 GAAACCACGAGAAAA CTCTTGC GTTA ACAAGAG CGCCCTTGTTCAGTC TERM 4259 3298413 - 3298437 + H 70 -5 -4.52589 | gap 1, overlap 3298417 ACCCGGCTGGAAGTG GCGACACGAAG AAAA CGTCGTGT-GC TTTTGTATGAGCCGC TERM 4260 3298450 - 3298460 + G 81 -8.2 -4.36914 | TGCTTTTGTATGAGC CGCG CGT CGCG TTTTATACCCAGAAC SeD_A3432 3298434 - 3298601 + | hypothetical protein TERM 4261 3299226 - 3299214 - g 83 -7.7 -4.59853 | opp_overlap 3299214, overlap 3299216 TGAAGTGCGTAAAAA TGGCA CCC TGCCA TGGTTGCGTCCGGAT TERM 4262 3299883 - 3299869 - g 74 -7.8 -4.11869 | GAAAAAATCGACAAA GCGCAA CTG CTGCGC GATGCTGCCGGTCTG metK 3298750 - 3299904 + | S-adenosylmethionine synthetase TERM 4263 3299977 - 3299959 - f 79 -11.7 -3.18582 | opp_overlap 3299959 TACCGTACTTATCAA GGCCAGC GCCCT GCTGGCC TTTATCATTGCTGAT TERM 4264 3299959 - 3299977 + F 95 -12.4 -4.08546 | opp_overlap 3299959 TACCGTACTTATCAA GGCCAGCG CCC TGCTGGCC TTTATCATTGCTGAT TERM 4265 3300660 - 3300647 - g 84 -3.1 -5.40072 | gap 1 TGGGTCGTAAAAAAA GCCTGA TGA TC-GGC GCTATCCTGTTCGTC galP 3300397 - 3301791 + | galactose-proton symporter TERM 4266 3301800 - 3301826 + F 100 -21 -5.08601 | CGACTAATCCCTCCA CGCTTCCTCCTG CCA CAGGAGGAAGCG TTTTTCTTGCAGTCC sprT 3301870 - 3302367 + | protein SprT TERM 4267 3302486 - 3302507 + G 80 -8.7 -4.07568 | TAATTTTTCTTTTGC CGCTGCG TTGCTGGC CGCAGCG TTTTCAGGCCAGGCC endA 3302463 - 3303170 + | endonuclease I TERM 4268 3303663 - 3303627 - g 77 -3.6 -5.06816 | gap 1, overlap 3303628 3303629 ACGTCTGAACAAAAA GC-GCCAGCAGTGGCAA AAGA TCGCCATCGCCGCCTGC GAACAATGCGGGCGT SeD_A3437 3303199 - 3303978 + | protein YggJ TERM 4269 3304491 - 3304505 + G 74 -7.8 -4.14392 | AACCGCTGGACGGTA TGGGCG GCG CGTCCA TTTTCCGCGTTAAGG gshB 3303998 - 3304945 + | glutathione synthase SeD_A3439 3305161 - 3305724 + | hypothetical protein TERM 4270 3305776 - 3305764 - g 70 -3.3 -4.83169 | ACTTCGGCACAAAAA GCATC GGC GTTGC AATAGGACAACGCAT TERM 4271 3305912 - 3305874 - g 71 -9.5 -3.53761 | GAACGTTTGCTGAAA GAGTGGCAGCCGGACGA AATTA TTGTCGGGCTACCGCTC AATATGGATGGCACT SeD_A3440 3305724 - 3306140 + | putative Holliday junction resolvase SeD_A3441 3306873 - 3306187 - | regulatory protein, IclR SeD_A3442 3307986 - 3307006 - | PilT TERM 4272 3307438 - 3307420 - G 72 -11.6 -3.06183 | GGGATCTTCACGTAA CGCCGCGC GCA GCCCGGCG GCAAAAGTGGCGCAA TERM 4273 3307769 - 3307745 - G 78 -13.5 -2.52896 | overlap 3307704 TGATGTGTGAACGCA CTGGCGCGCAG GCG CCGCGTGCCAG ACAGCGAGACGGCGA TERM 4274 3308061 - 3308047 - g 70 -5.6 -4.38154 | opp_overlap 3308049, overlap 3308049 ACATCCGGGACAAAA TCTCCG CCG CGGCGA CGCGTTGCGGCCGCT TERM 4275 3308137 - 3308118 - g 71 -5.7 -4.23781 | overlap 3308119 GTGAGTAAAACCAAA CCTGCGA GCGACA TCGCAGA AGCCATTGCCGCCGG TERM 4276 3308230 - 3308200 - g 74 -2.5 -5.00884 | opp_overlap 3308187, overlap 3308187 3308201 AGGGGGTGGAAAAAA TCCGCCACTTTCA GGAAG CGAAAGTGGAAGG CCTGCACTGGCACTT SeD_A3443 3308004 - 3308708 + | pyridoxal phosphate enzyme, YggS family SeD_A3444 3308727 - 3309293 + | YGGT family protein SeD_A3445 3309290 - 3309580 + | conserved hypothetical protein TIGR00251 TERM 4277 3309642 - 3309655 + G 70 -6.7 -4.21098 | opp_overlap 3309627, overlap 3309627 GTGCGCGAGCTCGCG TCGCT GTTA AGCGA TTTTGGGCTTGATGT TERM 4278 3310148 - 3310120 - g 91 -3.7 -5.4505 | opp_overlap 3310147, overlap 3310122 3310144 CCCGTGAAGAAAAAA GCGCGATTTCCCA CCG TGGACAAGCGCTC AAGCTGCTGCTGGAT rdgB 3309588 - 3310181 + | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family TERM 4279 3311248 - 3311271 + G 73 -5.3 -4.6644 | opp_overlap 3311233 3311255 TGCGAGCAATACTGG CAGATTACC CGGCAC GGTAAACTG TTTTTAAACTCTCTT SeD_A3447 3310174 - 3311310 + | putative oxygen-independent coproporphyrinogen III oxidase SeD_A3448 3312409 - 3311402 - | putative periplasmic protein TERM 4280 3311860 - 3311871 + g 74 -4.4 -4.77165 | CGTCCGCTTCTTTTT TAGC TACC GCTA TTTTCTTATCCAGGG TERM 4281 3312275 - 3312310 + g 70 -7 -4.2142 | gap 1, opp_overlap 3312277 TAAGGTAATGGAATC CAGTTTAAGTATGCCGT GGT ACTGCTTAC-TAAACTG TTCTTTTAAGATGTT TERM 4282 3312535 - 3312511 - R 73 -10 -3.34715 | gap 1, opp_overlap 3312512 3312513, overlap 3312509 3312512 GAGGTCTTCCAAAGA TGGCCCCGGCC TTCC GACCGGGGC-A TTATCTTTAATACTG TERM 4283 3312512 - 3312535 + r 77 -9.4 -3.87323 | opp_overlap 3312511 3312512 3312509, overlap 3312513 AGGTCTTCCAAAGAT GGCCCCGGCC TTCC GACCGGGGCA TTATCTTTAATACTG TERM 4284 3312535 - 3312512 - R 76 -11.6 -2.60615 | opp_overlap 3312512 3312513, overlap 3312511 3312509 AGGTCTTCCAAAGAT GGCCCCGGCC TTCC GACCGGGGCA TTATCTTTAATACTG TERM 4285 3312513 - 3312534 + r 82 -12.9 -2.91671 | opp_overlap 3312511 3312512 3312509, overlap 3312512 GGTCTTCCAAAGATG GCCCCGGCC TTCC GACCGGGGC ATTATCTTTAATACT SeD_A3449 3313588 - 3312542 - | L-asparaginase 2 TERM 4286 3312894 - 3312874 - G 71 -7.5 -3.95073 | TCGCATAGTTATAAA CGATACCGA CTT TCGGCAACG CGGTCAGCTTCGACA TERM 4287 3313737 - 3313757 + r 70 -9.7 -2.94232 | opp_overlap 3313737, overlap 3313736 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTACGCC ATTGTTTAAAAAGGA TERM 4288 3313757 - 3313737 - R 100 -11.9 -5.35365 | opp_overlap 3313737 3313736 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTACGCC ATTGTTTAAAAAGGA SeD_A3450 3314496 - 3313777 - | hypothetical protein TERM 4289 3314518 - 3314537 + r 73 -10.6 -3.03203 | opp_overlap 3314517 3314516 CCCTCAAGACAAAGC GGGCCGGC ATTT GCCGACCC TGTACTTATTAGTCC SeD_A3451 3314872 - 3314546 - | hypothetical protein TERM 4290 3314694 - 3314710 + g 70 -6.5 -4.18488 | CAGGCCAGGTAGCCG CTGCCGT CAA ACGCCAG TTTATTAGGCTCAAT trmB 3315639 - 3314872 - | tRNA (guanine-N(7)-)-methyltransferase TERM 4291 3315222 - 3315250 + g 74 -7.3 -4.08394 | TTTTATGCAACACTT CTACCGCGTCGTG GCA CATGACGCGCAGG TTTTCAACGCCCTCT TERM 4292 3316260 - 3316281 + G 74 -6.5 -4.25283 | gap 1, opp_overlap 3316260 TGAGCGAGCAAGTGA CGCCCGCACG CGG CGTG-GAGCG TTTTAATCAGGCGAT mutY 3315746 - 3316798 + | A/G-specific adenine glycosylase TERM 4293 3317009 - 3316987 - g 77 -4.1 -4.99861 | GATTAACGAGAAAAA GCTCAACAT GATGA ACGCCGAGC ACCGTAAGCTGCTGG SeD_A3454 3316826 - 3317101 + | probable Fe(2+)-trafficking protein TERM 4294 3317718 - 3317701 - g 80 -9.1 -4.08945 | opp_overlap 3317715, overlap 3317702 3317713 ATTACTTGCTGAAAA CGCGGCT CAAA AGCCGCA GTAACGGCCTGCGTA SeD_A3455 3317214 - 3318299 + | membrane-bound lytic murein transglycosylase C SeD_A3456 3318489 - 3318364 - | hypothetical protein nupG 3318516 - 3319772 + | nucleoside permease NupG TERM 4295 3319782 - 3319833 + T 100 -18.3 -3.51708 | gap 2, overlap 3319783 CATTAATCCTTGCCC TGTT-TC-GCAGGCCGGATAAGGCG TAAA TGCCTTATCCGGCCTGCAGGCAACG TTACTTTAAAACATA TERM 4296 3319783 - 3319832 + T 100 -19.6 -2.70704 | gap 2, overlap 3319782 ATTAATCCTTGCCCT GTT-TC-GCAGGCCGGATAAGGCG TAAA TGCCTTATCCGGCCTGCAGGCAAC GTTACTTTAAAACAT SeD_A3458 3321969 - 3319834 - | ornithine decarboxylase, constitutive TERM 4297 3320143 - 3320154 + g 75 -5.8 -4.60889 | CGGCAGGCTTTCTTT GCGA AACA TCGC TTTTTGCAGATCCTT TERM 4298 3320874 - 3320861 - G 73 -5.2 -4.56597 | TTGTGCGGGCAAAAA CGCG CCTGGC CGCG AATATGGTTATCTTT TERM 4299 3322076 - 3322106 + H 73 -9.9 -3.41602 | opp_overlap 3322075 3322078 3322085 CCGACCGCCAGACAT CAGTAAAAACAGA CTGTT TCTGATTTTACTG TTGTCCTGCAGTGAG TERM 4300 3322097 - 3322085 - H 71 -3.4 -4.79826 | opp_overlap 3322076, overlap 3322078 3322075 AGACATCAGTAAAAA CAGA CTGTT TCTG ATTTTACTGTTGTCC SeD_A3459 3322242 - 3322355 + | hypothetical protein TERM 4301 3322559 - 3322606 + G 72 -2.6 -4.93877 | gap 1, overlap 3322563 ATGAAGTGCGCTAAT CTT-CCGGTGATGGTGCTGGCGA CGC TGGTCGGCGCGCTCATCGGCGAG TTTTGTTTGCTGGAA TERM 4302 3322857 - 3322871 + G 77 -11.4 -3.53563 | overlap 3322852 CCTGTTCGCTTGGCA TCGCCG TTT CGGCGA TTTGCGCACCGATGT TERM 4303 3323074 - 3323089 + G 74 -2.4 -5.12617 | overlap 3323073 3323074 3323083 GGCGATGCCGATCTC CGCCGC ATGG GCGATG TTTTTTGCCTGATTC SeD_A3460 3322394 - 3323101 + | YqgA TERM 4304 3323249 - 3323233 - T 73 -10.9 -2.62616 | opp_overlap 3323232 3323231 3323228 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA SeD_A3462 3325211 - 3323886 - | 4-hydroxybutyrate coenzyme A transferase SeD_A3463 3325763 - 3325236 - | FkbR2 TERM 4305 3325700 - 3325670 - G 78 -6.8 -4.60487 | overlap 3325672 GACGATGTTCAAAAA CATCACCGGGATGA AAA TCCTCCCAGTAAAG ACCCGAAATTTCTCG TERM 4306 3325698 - 3325672 - G 71 -8 -3.91506 | overlap 3325670 CGATGTTCAAAAACA TCACCGGGATGA AAA TCCTCCCAGTAA AGACCCGAAATTTCT SeD_A3464 3326629 - 3325787 - | HpcH/HpaI aldolase/citrate lyase family protein TERM 4307 3327282 - 3327293 + G 100 -4.4 -5.94597 | ATTGCACTCTCGATT CTCA AAGA TGAG TTTTTTTTACTCTTC SeD_A3465 3326721 - 3327599 + | StmR SeD_A3466 3329386 - 3327647 - | arylsulfatase TERM 4308 3328224 - 3328236 + g 70 -5.5 -4.46212 | overlap 3328225 GTATTAATTCCCCCC TGACC GCT GGTCG TTTTGTGATAGCGAC SeD_A3467 3330639 - 3329455 - | arylsulfatase-activating protein AtsB TERM 4309 3330392 - 3330381 - G 74 -7.2 -4.08216 | CGATTCCGGCTAAAA GCGG TTCA CCGC CTTGCCAGACAAAAT TERM 4310 3330732 - 3330756 + H 70 -5 -4.42386 | gap 1, opp_overlap 3330723 3330734, overlap 3330734 GCAGAATGCCGAGAG CAGGCTGTATC TATT GATAC-GCCGG TTTTCTGCATAGCGC TERM 4311 3330895 - 3330880 - H 76 -9 -3.68435 | overlap 3330878 CGTCTCAAAAGAATA TCGTCC TGAA GGACGA GAACTCACGGCATTT TERM 4312 3330951 - 3330963 + H 74 -3.5 -5.0538 | opp_overlap 3330951 AAAAAATTATATTAA TAATT TTA AATTA TTTTTTAGAATAACC TERM 4313 3331229 - 3331241 + G 84 -3.3 -5.36965 | GCGCAACTCATTCCT CTGTC GTC GGCGG TTTTTTATCGTGTTA SeD_A3468 3331088 - 3331834 + | LysR-family transcriptional regulator SeD_A3469 3332496 - 3331939 - | putative cytoplasmic protein SeD_A3470 3333973 - 3332474 - | amino acid permease SeD_A3471 3334109 - 3333966 - | hypothetical protein TERM 4314 3334096 - 3334134 + g 71 -8 -3.7941 | opp_overlap 3334123 3334124, overlap 3334093 TAAATAACGTTGTGA CGCCGTCCCCGCATGC GCTAATA GCAAGTGGGGAGCGCG TTATTCTCCCCAGTG SeD_A3472 3334556 - 3334182 - | putative cytoplasmic protein SeD_A3473 3335872 - 3334571 - | tyramine oxidase TERM 4315 3335970 - 3335936 - H 70 -5.1 -4.386 | opp_overlap 3335936, overlap 3335954 TAACGTTTTACAAAA TATCGTCCGGAAGAA TGACG TTCTTTGGAACGATA TTCAGTTCCAGGCAA TERM 4316 3336045 - 3336068 + G 74 -2.4 -5.00616 | overlap 3336047 TCTGATGAGCGACGT GACATTACTT GCCG AAGTAACGAC TTTTTTACGCCAACG TERM 4317 3337111 - 3337087 - g 75 -5.8 -4.59773 | gap 2 GTTCAGCTTGAAAAA GTGCTGCGTCTG ATT CA-ACGC-GCAC GGGAAGAAGGGGATA SeD_A3474 3336034 - 3337518 + | phenylacetaldehyde dehydrogenase SeD_A3475 3337863 - 3337654 - | putative cytoplasmic protein SeD_A3476 3338519 - 3338034 - | putative cytoplasmic protein TERM 4318 3339070 - 3339059 - R 79 -3 -5.27779 | GTGAACACTAAAAAA TGAT TTAA ATCA AAAAAAACTATTCTC SeD_A3477 3340165 - 3339242 - | polysaccharide deacetylase domain protein SeD_A3478 3341082 - 3340204 - | putative amidohydrolase TERM 4319 3340645 - 3340664 + g 73 -6.4 -4.43189 | opp_overlap 3340645 ACCCACCTTTGCAAA TGGCAGTT GAAA AACAGCCA TTTTATCGCCTTCCT TERM 4320 3341337 - 3341315 - R 74 -10.8 -3.27653 | overlap 3341313 ACCCTTACCACAATA TTATTTTCAG CAT CTGAAAATAA TCAGGCAAACTAAAT TERM 4321 3341356 - 3341382 + r 78 -6.5 -4.59773 | opp_overlap 3341358, overlap 3341358 GGCAAACTAAATGAT AACGCGCTGGT ATAAA ACCAACGCGTA TTTTTACCGATAAGG TERM 4322 3341358 - 3341380 + r 77 -9.1 -3.91506 | opp_overlap 3341358, overlap 3341356 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4323 3341380 - 3341358 - R 86 -11.3 -3.66643 | opp_overlap 3341358 3341356 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4324 3341429 - 3341406 - R 85 -12.4 -3.38326 | overlap 3341408 GATAAGGGTAATGAA GACGGCCACC CGAA GGTGGCCGTT AGAACCCGGTAGCGC TERM 4325 3341427 - 3341408 - R 100 -15 -3.25539 | overlap 3341406 TAAGGGTAATGAAGA CGGCCACC CGAA GGTGGCCG TTAGAACCCGGTAGC exuT 3342782 - 3341478 - | hexuronate transporter TERM 4326 3342865 - 3342854 - H 76 -4.4 -5.04325 | opp_overlap 3342858 CTGAAATCACAAAAA TTGG TTGA CCAA TCAATATTTTCTCAT uxuA 3343187 - 3344371 + | mannonate dehydratase TERM 4327 3344379 - 3344403 + F 100 -16.5 -3.62275 | GCAAATAACCTTCTT TCGCATGGCGC GAC GCGTCATGCGA TTTCCCCTACTCAAT TERM 4328 3344920 - 3344875 - g 87 -8.3 -4.66163 | gap 1, opp_overlap 3344889 3344890 ACCGTGACCGAAAAA GGCTACTG-CACCGACCCCGCC AGC GGCGAGCTTGATGTCAATAACC CGCTGATCCAAAACG SeD_A3481 3344482 - 3345954 + | D-mannonate oxidoreductase TERM 4329 3346910 - 3346922 + G 76 -10.5 -3.68619 | GTTCCGCCTGCTGGG GCCGG ATA CCGGC TTTGACTCCATTGGC uxaC 3345966 - 3347378 + | glucuronate isomerase TERM 4330 3347508 - 3347496 - T 71 -3.4 -4.82901 | opp_overlap 3347496, overlap 3347503 GGCCGCCGATAAAAA GCAA AGATG TTGC TGATTAATCCCGAAT TERM 4331 3347560 - 3347503 - T 76 -8.8 -3.7798 | gap 2, opp_overlap 3347496 3347526, overlap 3347496 3347516 GATAAAAAGCAAAGA TGTTGCTGATTAATCCCGAATCACTTAC TAAG GTAAGTGATTCGGG-TAAACAAAC-ACA GCCATCTTCTGCGTC TERM 4332 3347549 - 3347516 - T 100 -16.9 -3.14344 | opp_overlap 3347526, overlap 3347503 GATGTTGCTGATTAA TCCCGAATCACTTAC TAAG GTAAGTGATTCGGGT AAACAAACACAGCCA SeD_A3483 3348737 - 3347679 - | putative methyl-accepting chemotaxis protein SeD_A3484 3348915 - 3348799 - | hypothetical protein SeD_A3485 3349099 - 3349296 + | hypothetical protein TERM 4333 3349394 - 3349358 - T 100 -13.8 -3.81488 | gap 1, overlap 3349360 CGCTGGTAAACACAA CAGGCGGGATATCGGCA CCCA CGCCGATATCCCGAC-G AGAATGACCCCGTTA TERM 4334 3349393 - 3349360 - T 100 -17.5 -3.49232 | overlap 3349358 CTGGTAAACACAACA GGCGGGATATCGGCA CCCA CGCCGATATCCCGAC GAGAATGACCCCGTT SeD_A3486 3351263 - 3349407 - | glutathionylspermidine synthase TERM 4335 3350548 - 3350561 + g 77 -4.5 -4.83615 | ATAACGTGCCCGTTC GCCTG TACA TAGGC TTTTTGTAACGGATC TERM 4336 3350940 - 3350915 - G 75 -12.5 -2.62184 | gap 1 CCTTTTGCCAGATGA GCAGCGCCCCGG CCT CCGGCGCGC-GC GGCGAACCGTTCGGG SeD_A3487 3351490 - 3352356 + | glutathione S-transferase SeD_A3488 3353125 - 3352424 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 4337 3352979 - 3352929 - G 88 -11.2 -4.07568 | gap 3, overlap 3352914 CGGTTCGTCGTAAAA GGCGCGACCCGCA-GCGCCCGCCCG CTTT CCAGCA-GCGCCTGCGGAT-GCGCC AGGTTCGCCGAAGCA TERM 4338 3353851 - 3353871 + r 78 -6.7 -4.59773 | opp_overlap 3353848 3353850 CGTGACAAACACCAC CTGCGGGCG CAG CGCCACCAG TTTTTCAGGATCAAC TERM 4339 3354162 - 3354142 - R 80 -9.7 -3.96447 | CCAGCAAAAAAGCAA CGCCAGC AGAGAGA GCTGGCG CAAAAATTTATTCAT hypC 3354501 - 3354253 - | hydrogenase assembly chaperone HypC/HupF hypA 3354870 - 3354529 - | hydrogenase nickel insertion protein HypA SeD_A3493 3355351 - 3354863 - | hydrogenase-2 component protein hybD 3355838 - 3355344 - | hydrogenase expression/formation protein TERM 4340 3355424 - 3355403 - G 71 -10.2 -3.16564 | opp_overlap 3355406, overlap 3355406 CTCGCAGCGCAGCAA GAACCTGC TCAAGC GCAGGTTC AATCATCGCCTCGAC hybC 3357541 - 3355838 - | hydrogenase-2, large subunit TERM 4341 3356512 - 3356524 + g 74 -10.5 -3.50335 | TAGTGCCTTCCCACG GCGCC TGC GGCGC TTCATCTTTGTACCA TERM 4342 3357067 - 3357083 + g 70 -9.5 -3.40382 | opp_overlap 3357070, overlap 3357070 GCTGACCGCTGGCGA CAAGATC CTT GATCTTG TTCTGAACTTTCGTG TERM 4343 3357560 - 3357571 + r 76 -4.4 -5.07652 | overlap 3357549 3357554 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3358716 - 3357538 - | Ni/Fe-hydrogenase 2 b-type cytochrome subunit TERM 4344 3357684 - 3357664 - G 74 -8.3 -3.95911 | AATAGAAATCAACAA TTCTTCCCA AGT TGGGAAGTA GTGGTAGCCGCCACC TERM 4345 3358688 - 3358698 + g 77 -8.2 -4.21462 | TTACTGATGATTTTT CCGC CCA GCGG TTTTGGATCATGACT hybA 3359692 - 3358706 - | hydrogenase-2 electron transfer subunit TERM 4346 3359282 - 3359299 + g 76 -2.7 -5.00616 | gap 1, overlap 3359286 TTTGTCATAGTGGAC GATGCCGG TTT TCGG-ATC TTTTTTCAGCGCCGA TERM 4347 3359349 - 3359362 + g 74 -6.7 -4.29106 | opp_overlap 3359348 CAGTTAGGATCAACG CAGTG CATA CACTG TTTCTTGATGTAGGC hybO 3360813 - 3359695 - | hydrogenase-2 small chain SeD_A3499 3361006 - 3360821 - | hypothetical protein SeD_A3500 3361290 - 3361003 - | hypothetical protein TERM 4348 3361348 - 3361360 + r 89 -6.2 -5.27477 | ATTAAATGAAGGCCA GCGC ATTAC GCGC TTTTTTGCTTCACAT SeD_A3501 3363018 - 3361375 - | methyl-accepting chemotaxis sensory transducer TERM 4349 3361531 - 3361482 - G 76 -10.7 -3.62096 | gap 1, opp_overlap 3361461 GCTCACGAGCGGAAA GCCGGAACTGCTGTACGGAGCGTT GCA AATCCTCCGT-CTGCCGTTCCAGC GCCGCCGCCGCCGCG TERM 4350 3363088 - 3363112 + r 79 -2.1 -5.48303 | overlap 3363089 GTTATCGGCAAGGCG CGGAGAATATA TAA TGCATTCTCCA TTTTTTTACAGTTAT SeD_A3502 3363819 - 3363325 - | hypothetical protein TERM 4351 3363700 - 3363687 - G 78 -6.7 -4.62069 | CCGCCAGGGCAAAAA CGTTC GGCA GAACG TGTAGAATGTCCTGG TERM 4352 3363749 - 3363721 - G 71 -4.6 -4.57341 | overlap 3363722 AATGTCCTGGAAAAA TTTTAGCGCTAA AGCGA TCAGCGCCAAAG AGAGGCCAAAATACA SeD_A3503 3364602 - 3364099 - | hypothetical protein TERM 4353 3364797 - 3364783 - g 76 -2.8 -4.99972 | AGAAAACAGTAAAAA TTTGCC TCA GGGAAA GACAAAACTCAGCGA SeD_A3504 3364706 - 3365116 + | hypothetical protein SeD_A3505 3365103 - 3365507 + | putative cytoplasmic protein TERM 4354 3365519 - 3365505 - f 70 -2.1 -5.08601 | GCACGGCAAGAAAAA TAACC TTCAT GGCTA GTTAACTCTGTTGTG TERM 4355 3365706 - 3365691 - g 85 -6.8 -4.87291 | gap 1, overlap 3365693 TATCCTAAGCAAAAA CAGCCGG CGC CCGGC-G TCCAGGCGAAAATGA TERM 4356 3365705 - 3365693 - g 83 -10.5 -4.05402 | overlap 3365691 TCCTAAGCAAAAACA GCCGG CGC CCGGC GTCCAGGCGAAAATG SeD_A3506 3365631 - 3366515 + | general stress protein 39 TERM 4357 3366607 - 3366580 - T 100 -9.9 -5.4833 | gap 2 TTAGGCAATAAAAAA GCCGGGT--GGCG ACTT CGCCTTACCCGGC CTACAGCGTCAGCAG exbD 3367053 - 3366628 - | TonB system transport protein ExbD exbB 3367794 - 3367060 - | tonB-system energizer ExbB SeD_A3509 3367924 - 3367787 - | hypothetical protein TERM 4358 3368880 - 3368863 - g 74 -7.7 -4.13304 | gap 1 AAAGCAGCCTCAAAA TCGCC-GC ATG GCTGGCGA ACCATCCTCAGGTCG metC 3368046 - 3369233 + | cystathionine beta-lyase SeD_A3511 3369373 - 3370032 + | hypothetical protein SeD_A3513 3371101 - 3370985 - | hypothetical protein SeD_A3514 3371188 - 3372351 + | alcohol dehydrogenase YqhD SeD_A3515 3372457 - 3373284 + | 2,5-diketo-D-gluconic acid reductase A TERM 4359 3373306 - 3373325 + F 100 -15 -5.15969 | TTTATCGCACGCCAT GCCCGACG ATGT CGTCGGGC TTTTTTGCATTCCGA TERM 4360 3375419 - 3375400 - g 100 -15 -4.77036 | opp_overlap 3375398 GCTGATGATGAAAAA CTGGCCGC GCTG GCGGCCAG AATTCGTGAGGCATA SeD_A3517 3374980 - 3375435 + | histidine triad SeD_A3518 3375787 - 3375593 - | hypothetical protein SeD_A3519 3378161 - 3375990 - | protein YgiQ TERM 4361 3377013 - 3376990 - G 74 -8 -3.97947 | overlap 3376992 GTGATCGAGCAGAAA GAGCAGCCGC CAAA GCAGCCGCGC ATGATATTGATCGAA TERM 4362 3379086 - 3379100 + G 78 -7 -4.63527 | overlap 3379088 CTTAACCTGGTACGA CGGCGG CGC CCGCAG TTTTTACGCTGGTAA TERM 4363 3379223 - 3379195 - g 71 -10.1 -3.57263 | overlap 3379169 ATCGCGATGGTGAAA GCGCTCGGCGGCG TGC CGACGCCGATGGC GCAAGGCGAACTCTA SeD_A3520 3378649 - 3379632 + | trap transporter solute receptor, dctp family TERM 4364 3379640 - 3379658 + F 88 -12.4 -3.56821 | opp_overlap 3379635 3379634, overlap 3379634 3379651 ATATGTAAATCTGCC GGGCAGGG TTC TCCTGCCC TTTACAGGATGTAAT SeD_A3521 3379674 - 3380156 + | trap-type c4-dicarboxylate transport system, small permease component TERM 4365 3380342 - 3380330 - g 76 -3.3 -5.02074 | opp_overlap 3380332 3380333, overlap 3380331 3380333 TTATTTCGCAAAAAA TGACC GTC GGTCT CGATGGCTTTACGCT TERM 4366 3380587 - 3380575 - g 70 -3.3 -4.82667 | CCATTACAGGAAAAA GAGGG CTA CTCTC CGGCGTTCTCTACGG TERM 4367 3380676 - 3380703 + G 71 -4.9 -4.57569 | overlap 3380676 3380677 TGTCTATTCGCTGGC TAGCGGCGGC-AC CTCT GTCGCCGCC-CTG TTTTTGGCGGGCTAC SeD_A3522 3380167 - 3381474 + | YgiK SeD_A3523 3382931 - 3381519 - | protein SufI SeD_A3524 3383742 - 3383005 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 4368 3383944 - 3383901 - R 90 -13.3 -3.61103 | opp_overlap 3383918 3383927, overlap 3383918 TAATCCGATCTGAAA CCGTAGGCCGGATAA-GACGC TACT GCGTCGTCATCCGGCA-ACGG CAGAGCGCCGGATGG TERM 4369 3383927 - 3383963 + r 75 -10.9 -3.10905 | opp_overlap 3383901 3383918, overlap 3383918 ATAAGACGCTACTGC GTCGTCATCCGGC AACGGCAGAGC GCCGGATGGCGGC TTAGATGCCTTGTCC parC 3386257 - 3383999 - | DNA topoisomerase IV, A subunit TERM 4370 3386358 - 3386317 - R 75 -9.6 -3.48593 | gap 1, overlap 3386319 3386320 3386345 TATTGCCGCAGATAA TACCCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAG-GTG GCGAGGAAGTTAACG TERM 4371 3386357 - 3386319 - R 93 -14.7 -3.31726 | overlap 3386317 3386320 3386345 TTGCCGCAGATAATA CCCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAGGT GGCGAGGAAGTTAAC TERM 4372 3386356 - 3386320 - R 100 -18.2 -2.58822 | overlap 3386319 3386317 3386345 TGCCGCAGATAATAC CCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAGG TGGCGAGGAAGTTAA SeD_A3526 3387234 - 3386368 - | transcription activator, effector binding SeD_A3527 3387698 - 3387306 - | hypothetical protein SeD_A3528 3387850 - 3388509 + | transcriptional regulatory protein QseB TERM 4373 3388531 - 3388551 + G 71 -6.1 -4.37527 | opp_overlap 3388521, overlap 3388534 CGCAACGTCTCAGCC TGCGCGTCA GGC TGACGCTTA TTTTCCTGATTCTGG TERM 4374 3388534 - 3388548 + G 86 -10 -4.29049 | opp_overlap 3388521, overlap 3388531 AACGTCTCAGCCTGC GCGTCA GGC TGACGC TTATTTTCCTGATTC TERM 4375 3388883 - 3388894 + G 81 -2.2 -5.37345 | gap 1, opp_overlap 3388883 TCTGAAGGATGACAA CGACC TCT GG-CG TTTTTTGTGGTTGAA SeD_A3529 3388506 - 3389855 + | sensor protein QseC SeD_A3530 3389849 - 3389965 + | hypothetical protein SeD_A3531 3389962 - 3390543 + | NADPH-specific quinone oxidoreductase SeD_A3532 3390575 - 3390889 + | protein YgiN SeD_A3533 3391007 - 3390894 - | hypothetical protein parE 3392906 - 3391014 - | DNA topoisomerase IV, B subunit yqiA 3393515 - 3392934 - | esterase YqiA TERM 4376 3393398 - 3393369 - G 71 -10.8 -3.18239 | gap 1, opp_overlap 3393371 GAGAGATTCCAGCAA CT-CCGCCGCATC GGCAG GATACGGCGGTAG TTGAGGGACGATCAT icc 3394342 - 3393515 - | protein icc SeD_A3537 3394789 - 3394367 - | hypothetical protein TERM 4377 3394456 - 3394466 + g 95 -5.4 -5.30616 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTTGGATAA SeD_A3538 3395418 - 3394786 - | hydrolase, NUDIX family TERM 4378 3394813 - 3394865 + g 74 -7.7 -4.20712 | opp_overlap 3394830, overlap 3394821 CTCGTTTTTTAACTC TTGATGATGCAACTGAAGCCATTGC AAA GCGATGACTGCGGCTGCGTTGTCGA TTTTCCCCTCTTCTA TERM 4379 3395352 - 3395339 - G 100 -3.7 -5.95166 | opp_overlap 3395340 3395345, overlap 3395340 TCCAATGAAAAAAAA CCGCG ATAG CGCGT TTCCCGTGCAATAAT TERM 4380 3395351 - 3395340 - G 74 -7.2 -4.15473 | opp_overlap 3395340 3395345, overlap 3395339 CCAATGAAAAAAAAC CGCG ATAG CGCG TTTCCCGTGCAATAA TERM 4381 3395547 - 3395571 + H 72 -5.7 -4.42235 | opp_overlap 3395531, overlap 3395549 GCCAACTTTTTGCAG TGGCGGATTCT GCT AGAATCAGCAA TTATTTTTACAAATT SeD_A3539 3395625 - 3397094 + | outer membrane protein TolC TERM 4382 3397105 - 3397162 + F 100 -22.9 -2.78384 | overlap 3397104 ATTGATAAGTTATTC GCTGGCGCTGCGCTTATCAGACCTGTG CCCT TGTAGGTCTGGTAAGCGCGGCGCTACC TGTCATAAAGCCGCG TERM 4383 3397442 - 3397425 - g 76 -2.7 -5.00616 | opp_overlap 3397425, overlap 3397426 CTGGCTGTGAAAAAA GCGAT GAAACCGT ATCGC TGTATCAAAACGCTG TERM 4384 3397471 - 3397453 - g 71 -6 -4.25283 | ATCGCTGTATCAAAA CGCTGA TGACTGT TCAGCG GCGAATCCGGGCAAA TERM 4385 3397833 - 3397807 - g 71 -4.2 -4.65895 | overlap 3397808 3397810 TGCGGCAGGTAAAAA CTACGGCGCGGC GCA ACCGGGCCGGAC AATGACCGTACCGAA TERM 4386 3397830 - 3397810 - g 71 -10.3 -3.26405 | overlap 3397808 3397807 GGCAGGTAAAAACTA CGGCGCGGC GCA ACCGGGCCG GACAATGACCGTACC TERM 4387 3397953 - 3397926 - g 71 -10.6 -3.24232 | gap 1, opp_overlap 3397930, overlap 3397924 3397922 CCGTCGCCAAACAGA GCACCATGCAGCG TAG CGCTGC-CGGTAC TTCAACACGTTCGAT SeD_A3540 3397307 - 3397978 + | protein YgiB TERM 4388 3398351 - 3398367 + G 77 -3.6 -5.10497 | overlap 3398350 CCGACACGCCAACAT CGCTGT ATGAA GCGGCG TTTTTTCAGTGGATT SeD_A3541 3397984 - 3399147 + | glutathionylspermidine synthase SeD_A3542 3399997 - 3399209 - | extradiol ring-cleavage dioxygenase, class III enzyme, subunit B SeD_A3543 3400138 - 3400911 + | zinc transporter ZupT SeD_A3544 3401154 - 3400978 - | hypothetical protein TERM 4389 3401908 - 3401898 - g 80 -4.6 -5.11389 | overlap 3401905 AGAATATAAAGAAAA CGGC AAA GCCA TGAAGGATGACTATG SeD_A3545 3401554 - 3403350 + | arylsulfate sulfotransferase TERM 4390 3403746 - 3403736 - g 91 -6.8 -5.1925 | opp_overlap 3403735 TCACAATTCAAAAAA GCGA AGT TCGC CTGGTATGCGGCTTA SeD_A3546 3403370 - 3404041 + | disulfide isomerase SeD_A3547 3404056 - 3404733 + | disulfide bond formation protein B TERM 4391 3404783 - 3404748 - T 83 -9 -4.21142 | opp_overlap 3404753, overlap 3404753 ACCTGAATAGATAAA CCAAAGCAGAGGTCTG CATT CAGGCCTCTGCTTTTC TCACAATAATTTTAC TERM 4392 3404778 - 3404753 - T 95 -13.3 -4.20552 | opp_overlap 3404753, overlap 3404748 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4393 3404753 - 3404778 + T 100 -15.5 -4.3898 | opp_overlap 3404748 3404753 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4394 3404860 - 3404879 + T 100 -12.2 -5.02074 | opp_overlap 3404860 AAGGAATACAAAAAA GCCGATGA CATC TCATCGGC TTTTTTCAACCATGA TERM 4395 3404879 - 3404860 - T 100 -12.2 -5.50925 | opp_overlap 3404860 AAGGAATACAAAAAA GCCGATGA CATC TCATCGGC TTTTTTCAACCATGA ribB 3405557 - 3404904 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4396 3405272 - 3405300 + g 77 -8.1 -4.10429 | opp_overlap 3405277, overlap 3405275 3405277 3405293 CTTCAATGGTCACGG TAAAACCGGTGCC GTA GGCGCTGGTGTTG TTTTCCACCATCATT TERM 4397 3405275 - 3405297 + g 74 -7.6 -4.17762 | opp_overlap 3405277, overlap 3405272 3405277 3405293 CAATGGTCACGGTAA AACCGGTGCC GTA GGCGCTGGTG TTGTTTTCCACCATC TERM 4398 3405277 - 3405295 + g 76 -10.2 -3.68435 | opp_overlap 3405277, overlap 3405275 3405272 3405293 ATGGTCACGGTAAAA CCGGTGCC GTA GGCGCTGG TGTTGTTTTCCACCA TERM 4399 3406212 - 3406189 - g 71 -4.4 -4.58395 | overlap 3406190 3406191 CGCACCCGGGAAAAA CTGGCGCTGC TGGA GCAACGCCTC AGCGAACTGGAAGCT SeD_A3550 3405994 - 3406290 + | hypothetical protein TERM 4400 3406321 - 3406294 - T 100 -9.8 -4.90906 | opp_overlap 3406299, overlap 3406295 3406296 CCACAAGAGTAAAAA CGTGAACGGGCC TGAC GGCCCGCTCATA TAAGATCTGAATAAT TERM 4401 3406320 - 3406295 - T 82 -11.1 -3.53459 | opp_overlap 3406299, overlap 3406294 3406296 CACAAGAGTAAAAAC GTGAACGGGCC TGAC GGCCCGCTCAT ATAAGATCTGAATAA TERM 4402 3406319 - 3406296 - T 86 -14.6 -2.70991 | opp_overlap 3406299, overlap 3406295 3406294 ACAAGAGTAAAAACG TGAACGGGCC TGAC GGCCCGCTCA TATAAGATCTGAATA SeD_A3551 3406574 - 3406365 - | hypothetical protein SeD_A3552 3406820 - 3406671 - | hypothetical protein TERM 4403 3407286 - 3407250 - g 75 -13 -2.60512 | gap 1, overlap 3407247 GGGAAGAGGAATTTA TCGGCGGCATGGC-GAT TATT ACCGGCCACGCCGCCGT CGCCGGTACACCTTG SeD_A3553 3406832 - 3407452 + | inner membrane protein YqiJ SeD_A3554 3407471 - 3409150 + | inner membrane protein YqiK TERM 4404 3409170 - 3409191 + T 100 -13.7 -5.9667 | CCGCTATATCTCCTG TCCCTGGCC ATAA GGCCGGGGA TTTTTTTATCTTTTT TERM 4405 3409371 - 3409352 - T 86 -11.4 -3.71649 | opp_overlap 3409352, overlap 3409335 3409345 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC TGTAATAAGGAAAGG TERM 4406 3409463 - 3409485 + T 77 -9.1 -3.94051 | opp_overlap 3409462 3409460 3409457 AACAGCCAATCAGAG GGGGGAGAG ATCCC CTCTCACCC TTATTCCTTTACTTT TERM 4407 3409528 - 3409515 - T 83 -2.3 -5.76949 | TAGGTCGAAAAAAAA GCAGC GTCA ACCGC GAGATACGCGTCGAA SeD_A3556 3411042 - 3409609 - | bifunctional protein HldE glnE 3413933 - 3411090 - | glutamate-ammonia-ligase adenylyltransferase TERM 4408 3413517 - 3413469 - G 70 -9.4 -3.67622 | overlap 3413465 3413471 CATGCCTAAAATCAA CAGCGGCTGCGGAACGCCCTGC GGGTT ACAGGGGGTTCCCCATTCGCGG CAACAGGCGGCATAC TERM 4409 3413515 - 3413471 - G 73 -10.6 -3.41359 | overlap 3413465 3413469 TGCCTAAAATCAACA GCGGCTGCGGAACGCCCTGC GGGTT ACAGGGGGTTCCCCATTCGC GGCAACAGGCGGCAT SeD_A3558 3415352 - 3414051 - | adenylate cyclase SeD_A3559 3415594 - 3416208 + | hypothetical protein TERM 4410 3416679 - 3416689 + G 77 -8.2 -4.08692 | overlap 3416678 3416680 CCCTTGCGCGTATTG CGCG TGG CGCG TTTTGCCGCCCGTTA TERM 4411 3417098 - 3417065 - g 73 -5.1 -4.62471 | gap 1, overlap 3417066 3417067 CTTAACGCCGAAAAA CCTCTGGCCGC-GCCA TCA TGGCCACGGCCCGGCG GGCGTGAAACTGGTC SeD_A3560 3416271 - 3417512 + | multifunctional CCA protein TERM 4412 3417598 - 3417585 - T 73 -9.5 -3.30243 | AGTTAGGCCGGACAA GGCGG TACG CCGCC ATCCGGCAGGTCAAT bacA 3418437 - 3417616 - | undecaprenyl-diphosphatase BacA folB 3418894 - 3418535 - | dihydroneopterin aldolase SeD_A3563 3419001 - 3419612 + | hypothetical protein TERM 4413 3419828 - 3419850 + T 87 -11.2 -3.97406 | overlap 3419829 TTGCTGTAAACCCGT TGGGGCGGCA TGA TGTCGCCCCC TTTCTCCGCTTTTAC TERM 4414 3419829 - 3419849 + T 88 -14.7 -2.97721 | overlap 3419828 TGCTGTAAACCCGTT GGGGCGGCA TGA TGTCGCCCC CTTTCTCCGCTTTTA gcp 3420875 - 3419862 - | O-sialoglycoprotein endopeptidase TERM 4415 3421070 - 3421053 - H 74 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3421103 - 3421318 + | ribosomal protein S21 TERM 4416 3421365 - 3421397 + F 80 -7 -4.62475 | gap 1, overlap 3421368 TCGAGTTGTAGTTGT AAGGCCGTGC-TTCC GAAA GGAATGCGCGGCTTG TTTTCGTTTATGCAT TERM 4417 3421368 - 3421394 + F 95 -10.9 -4.40882 | gap 1, overlap 3421365 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTGTTTTCGTTTATG TERM 4418 3421695 - 3421723 + G 70 -5.4 -4.45517 | gap 1, opp_overlap 3421694 3421693 3421711 3421721, overlap 3421711 3421713 ATAATGAGAAAACCC CT-TCTTTCACCG TAAA CGGTGAAAAACAG TTTTATCACTGCTTT TERM 4419 3421999 - 3422016 + G 71 -9.9 -3.61536 | opp_overlap 3421987 AAAGCGCGGTCTGAG CGCTGAA ATTA TTCAGCG TTTCGCCATTGGCTT TERM 4420 3422878 - 3422852 - g 86 -10.8 -4.11692 | CATTTAGTGCCAAAA CAGGCGGAAAGC GGC GTTTCCCGCCCG GCTCCGCAGCTAAAA dnaG 3421553 - 3423298 + | DNA primase TERM 4421 3423415 - 3423393 - f 79 -10.6 -3.53012 | TGCCCTCGCTTTAAA TGTCGACAGC TAT ACCGTCGACA CCAATCAAACGAATA TERM 4422 3424071 - 3424051 - g 80 -10.3 -3.83155 | overlap 3424053 GACGAAGATGAAGAA GACGGCGAC GAT GACGCCGCC GATGACGACAACAGC TERM 4423 3424072 - 3424053 - g 85 -12.8 -3.49169 | overlap 3424051 CGAAGATGAAGAAGA CGGCGACG ATGA CGCCGCCG ATGACGACAACAGCA rpoD 3423448 - 3425295 + | RNA polymerase sigma factor RpoD TERM 4424 3425332 - 3425315 - T 100 -14.1 -3.95073 | opp_overlap 3425315 CCGCACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTTATCAGGCC TERM 4425 3425315 - 3425332 + T 100 -14.1 -5.60993 | opp_overlap 3425315 CCGCACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTTATCAGGCC TERM 4426 3425403 - 3425388 - T 72 -10.4 -2.90219 | opp_overlap 3425386 CAGAATTTCTACACA GCGCGA GTAT TCGCGC CCTCATTCCCCATTG SeD_A3568 3425925 - 3425419 - | G/U mismatch-specific DNA glycosylase TERM 4427 3426155 - 3426172 + r 100 -11.3 -5.72622 | opp_overlap 3426151 3426155 AAATCATATAATTAA GCCACTC TAAA GAGTGGC TTTTTTGTTTCTGAC TERM 4428 3426172 - 3426155 - R 82 -11.3 -3.5275 | opp_overlap 3426155, overlap 3426151 AAATCATATAATTAA GCCACTC TAAA GAGTGGC TTTTTTGTTTCTGAC SeD_A3570 3426973 - 3426206 - | siderophore-interacting protein TERM 4429 3427616 - 3427602 - g 100 -7.8 -5.40072 | GCGGGCGGAAAAAAA TCGCGA TTA CCGCGA ACGGCGCGCAATGGC TERM 4430 3427763 - 3427711 - g 71 -4.9 -4.67353 | GGAGTTACGTAAAAA TCCGCAGATGAAGC-GGGCGCTGGA TAACT TCAAG-GCCGTGCTGGATCTGCGGA TAAACCACAGCGATA SeD_A3571 3427208 - 3427852 + | transcriptional regulator, PadR family SeD_A3572 3429417 - 3427849 - | methyl-accepting chemotaxis protein II TERM 4431 3429778 - 3429738 - R 79 -12.7 -2.78384 | gap 2, opp_overlap 3429734 3429741 3429743 CCGCCTTCTATCAGA GCGCATCCGCCCGGTAAGC TTATT GCT-ACCGGGCGGATGT-C ATTACCGTTGCTACC TERM 4432 3429741 - 3429776 + r 100 -19.9 -2.75957 | gap 1, opp_overlap 3429738, overlap 3429734 3429743 CCTTCTATCAGAGCG CATCCGCCCGGTAAGC TTATT GCT-ACCGGGCGGATG TCATTACCGTTGCTA TERM 4433 3429743 - 3429774 + r 100 -16.7 -2.92246 | gap 1, opp_overlap 3429738, overlap 3429741 3429734 TTCTATCAGAGCGCA TCCGCCCGGTAAGC TTATT GCT-ACCGGGCGGA TGTCATTACCGTTGC SeD_A3573 3431325 - 3429805 - | aerotaxis receptor SeD_A3574 3431337 - 3431492 + | hypothetical protein TERM 4434 3432595 - 3432577 - g 70 -6.6 -4.08144 | TGGATGAAGTACAAA CCGGCATG GGG CGTACCGG CAAGATGTTTGCCTG TERM 4435 3432850 - 3432840 - g 74 -2.4 -5.07486 | CAGGCGGAACAAAAA GGCG ATA CGCT CCTGGATGGTTTTCG rocD 3431754 - 3433133 + | ornithine--oxo-acid transaminase TERM 4436 3434454 - 3434428 - g 70 -2.9 -4.70659 | gap 1, opp_overlap 3434412 3434447 3434451, overlap 3434431 3434432 GGCCATACGCAAAAA GAATCTG-GCCG TTGT CGGCGCAGGCCC GGCGGGGCTGGCTTT SeD_A3576 3433304 - 3435322 + | FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase family protein TERM 4437 3435352 - 3435402 + T 86 -13.5 -3.30771 | overlap 3435352 GGCGCTGCGCTTATC GG-GCTTACGCCGTCATACCGGTTT TAT AGGCCGGTATGACG-CTTGAGCGCC TTATCGACGGTGTCC TERM 4438 3435352 - 3435401 + T 83 -13.7 -2.58249 | gap 1, overlap 3435352 GGCGCTGCGCTTATC GGGCTTACGCCGTCATACCGGTTT TAT AGGCCGGTATGACG-CTTGAGCGC CTTATCGACGGTGTC SeD_A3577 3436539 - 3435403 - | methyltransferase family protein SeD_A3578 3436625 - 3437122 + | hypothetical protein TERM 4439 3437624 - 3437640 + G 90 -4.4 -5.39755 | gap 1, overlap 3437627 GCTGATAGCGAAAGG TGTGCCG GAAG CGGC-CA TTTTTTGTGATTATG SeD_A3579 3437274 - 3437966 + | SanA protein TERM 4440 3437996 - 3437969 - f 74 -6.9 -4.25104 | TTCTCGCCAGTAAAA TGCCAGAGTGC GTCGCA GCGCACTGGCA AGGGCGGAAAGGCGT SeD_A3580 3438055 - 3439053 + | putative oxidoreductase YgjR TERM 4441 3439195 - 3439222 + F 93 -12.2 -3.8211 | opp_overlap 3439199, overlap 3439199 GTCACCGGGCAGCCA TAAAGGAATGCG TCAG CGTATTCCTTTA TTGTTGTAAGTGAGA TERM 4442 3439199 - 3439218 + F 81 -8.6 -4.52415 | opp_overlap 3439199, overlap 3439195 CCGGGCAGCCATAAA GGAATGCG TCAG CGTATTCC TTTATTGTTGTAAGT TERM 4443 3439257 - 3439236 - f 86 -14.5 -2.52676 | opp_overlap 3439238 TATTGTTGTAAGTGA GACCTTGCC GAAT GGCAAGGTC TATGCATAAAAGCAA TERM 4444 3439238 - 3439255 + F 74 -11.3 -2.91264 | opp_overlap 3439236 TTGTTGTAAGTGAGA CCTTGCC GAAT GGCAAGG TCTATGCATAAAAGC TERM 4445 3439302 - 3439269 - f 81 -8.1 -4.42386 | opp_overlap 3439273, overlap 3439273 GGTCTATGCATAAAA GCAACGGCTAATGCC ATTC GGCGTTAGCCGTTTT TTTTTTGCATAGGGA TERM 4446 3439273 - 3439298 + F 100 -15.5 -6.38039 | opp_overlap 3439269 3439273 TATGCATAAAAGCAA CGGCTAATGCC ATTC GGCGTTAGCCG TTTTTTTTTTGCATA TERM 4447 3439298 - 3439273 - f 95 -13.3 -3.76186 | opp_overlap 3439273, overlap 3439269 TATGCATAAAAGCAA CGGCTAATGCC ATTC GGCGTTAGCCG TTTTTTTTTTGCATA SeD_A3581 3439324 - 3440292 + | inner membrane protein alx TERM 4448 3440326 - 3440352 + F 100 -16.6 -5.28942 | opp_overlap 3440326 CTGCCCCATCAAAAA CGCCCGGCAG CGCACAC CTGCCGGGCG TTTTTGTTTAACATG TERM 4449 3440352 - 3440326 - f 100 -16.6 -4.72272 | opp_overlap 3440326 CTGCCCCATCAAAAA CGCCCGGCAG CGCACAC CTGCCGGGCG TTTTTGTTTAACATG SeD_A3582 3440547 - 3441791 + | serine/threonine transporter SstT TERM 4450 3442362 - 3442378 + G 73 -5 -4.65895 | TGTTTCTGGAAAATG GGCTGC TCCCT GCCGCC TTTTTGCCTGGCGAC TERM 4451 3442603 - 3442629 + G 85 -8.7 -4.45577 | opp_overlap 3442603 3442601 CCTTTTCCATAAACA CGGCCTGTCGG CATTA TTGATAGGCCG TTTTATCGCGTTTGT SeD_A3583 3442241 - 3442903 + | inner membrane protein YqjA TERM 4452 3443259 - 3443241 - g 76 -8.8 -4.0251 | ACGATGACAACGAAA CGGTACAG TGG CTGTCCCG CTTACGGGAAAGCTC SeD_A3584 3442907 - 3443290 + | hypothetical protein TERM 4453 3443376 - 3443358 - f 76 -7.4 -4.27441 | opp_overlap 3443358 3443357 3443354 ACTATGATTAATAAA GCGGTG TTTAACC CACCGC GTTATTATCGGGATC SeD_A3585 3443435 - 3443803 + | hypothetical protein SeD_A3586 3443845 - 3444150 + | hypothetical protein SeD_A3587 3444153 - 3444551 + | hypothetical protein TERM 4454 3444637 - 3444581 - g 71 -7.2 -3.99805 | opp_overlap 3444600, overlap 3444576 3444611 CGCGAAAAACGTAAA GCG-CTGCTTCTCAGTCAGATCCAGCAG CAA CGGCTGGATCTGTCCGCC-AGCCGTCGC GACTGGCTGGAGACC SeD_A3588 3444548 - 3444847 + | hypothetical protein TERM 4455 3444864 - 3444911 + F 100 -13.7 -4.45485 | gap 2, opp_overlap 3444867, overlap 3444867 ATCTTTTCTTTTATA GCATCGCGCCATCAGGT-T-ATC ACCC GATTACACCTGGTGGCGCGATAC TTTTATGCATATAGT TERM 4456 3444908 - 3444867 - f 76 -11.8 -2.62184 | gap 2, opp_overlap 3444864 3444867 TTTTCTTTTATAGCA TCGCGCCATCAGGT-T-ATC ACCC GATTACACCTGGTGGCGCGA TACTTTTATGCATAT TERM 4457 3444867 - 3444908 + F 86 -14 -3.1919 | gap 2, opp_overlap 3444867, overlap 3444864 TTTTCTTTTATAGCA TCGCGCCATCAGGT-T-ATC ACCC GATTACACCTGGTGGCGCGA TACTTTTATGCATAT TERM 4458 3445047 - 3445022 - g 88 -13.4 -3.35679 | opp_overlap 3445025, overlap 3445025 TCTCTCCAGCGATAA CAATGACGCG CCAAAC CGCGTCATTG CTCATGAAAATAGCA TERM 4459 3445044 - 3445025 - g 73 -9.3 -3.8211 | opp_overlap 3445025, overlap 3445022 CTCCAGCGATAACAA TGACGCG CCAAAC CGCGTCA TTGCTCATGAAAATA SeD_A3589 3445002 - 3445487 + | putative inner membrane protein YqjF TERM 4460 3445511 - 3445530 + F 75 -6.4 -4.50976 | opp_overlap 3445511 3445520, overlap 3445506 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTCATCTGAAG TERM 4461 3445530 - 3445511 - f 89 -6.4 -5.28481 | opp_overlap 3445511 3445506, overlap 3445520 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTCATCTGAAG TERM 4462 3446546 - 3446563 + F 93 -12.7 -3.73647 | CTTTGGCTAATTTCA GGCGTCC TCCG GGACGCC TTATTAATAAATACC TERM 4463 3446997 - 3447019 + G 74 -4.8 -4.77036 | opp_overlap 3446996 3446997 ACGCCGGGCGACAAC CGCTTCGG CCCCGAT CCGAAACG TTTTTCCTGATGGCG SeD_A3592 3446664 - 3447029 + | inner membrane protein YhaH TERM 4464 3447030 - 3447066 + T 95 -10.9 -4.64861 | gap 1, opp_overlap 3447054, overlap 3447032 3447035 AAACGTTTTTCCTGA TGGCGGCGCGGCGC CGCTTTTAAA GCGCCGCGC-GCTA TTTATTTTCCGGCGA TERM 4465 3447032 - 3447046 + T 95 -12.8 -4.07568 | overlap 3447030 3447035 ACGTTTTTCCTGATG GCGGCG CGG CGCCGC TTTTAAAGCGCCGCG TERM 4466 3447035 - 3447064 + T 100 -14.3 -3.93868 | gap 1, opp_overlap 3447054, overlap 3447032 3447030 TTTTTCCTGATGGCG GCGCGGCGCCGCTT TTA AAGCGCCGC-GCGC TATTTATTTTCCGGC SeD_A3593 3447964 - 3447068 - | transcriptional regulator, LysR family TERM 4467 3448212 - 3448224 + G 76 -10.5 -3.65542 | opp_overlap 3448200, overlap 3448210 GAACCAGGAAGTGCT GGCGC CGG GCGCC TCTTTTCAGCCTCGA SeD_A3594 3448069 - 3448770 + | pirin family protein SeD_A3595 3448794 - 3448958 + | putative cytoplasmic protein TERM 4468 3448998 - 3448961 - T 82 -11.4 -3.57144 | gap 2 GGCCGCAGCCTGAAA TCATGCCGGATGGCGGCG CAAG CGCC-CGATCCGGC-TGA TAACGGGTAGACCCG TERM 4469 3449042 - 3449064 + T 77 -9 -3.99374 | overlap 3449043 3449060 CATCGGGCAACACGC TGCCCCGACG TCA TGCCGGGGCG TTATTATTAATGCGC TERM 4470 3449043 - 3449063 + T 73 -10.3 -2.99142 | overlap 3449042 3449060 ATCGGGCAACACGCT GCCCCGACG TCA TGCCGGGGC GTTATTATTAATGCG SeD_A3596 3450381 - 3449071 - | putative inner membrane protein TERM 4471 3449844 - 3449857 + g 100 -3.1 -5.95946 | gap 1, opp_overlap 3449839 3449844 AGGTATGAGACAGCA CTC-CC AGT GGCGAG TTTTTTTCTTCTTCC SeD_A3597 3451738 - 3450407 - | inner membrane transport protein YhaO TERM 4472 3450749 - 3450736 - G 70 -5.2 -4.46233 | overlap 3450747 GGAATCCTAAATAAA CGCC AAAGAA GGCG GTCATGACGGCAAAG TERM 4473 3451304 - 3451271 - G 73 -5.9 -4.52047 | overlap 3451263 CACCAGACCATAAAA CGGACTATCGGAAAG TAAT CCTTCCGTTACGCCG AAAGTATGCAGATAA TERM 4474 3451548 - 3451538 - G 74 -3.2 -4.88711 | overlap 3451547 AGAAGAGAGTAAAAA GACC CAA AGTC CCATCAGGCCAACCT TERM 4475 3451596 - 3451579 - G 79 -2.7 -5.16841 | GGACAGGAAGAAAAA CGATC CCTGCGCC GATCG CCATCCCGATACTCA TERM 4476 3451992 - 3451973 - R 100 -15 -5.58179 | opp_overlap 3451973 TATCACAACAAAAAA GGGCGCAC GTTG GTGCGCCC TTTTCTCAGCTTCTG TERM 4477 3451973 - 3451992 + r 100 -15 -4.43859 | opp_overlap 3451973 TATCACAACAAAAAA GGGCGCAC GTTG GTGCGCCC TTTTCTCAGCTTCTG SeD_A3598 3453417 - 3452053 - | L-serine ammonia-lyase TERM 4478 3453451 - 3453486 + r 78 -11.9 -3.06915 | gap 1, opp_overlap 3453449 CGTTCAGTGAAGATC CGT-CGCGGGGCGATC CACAC GATCGCCCCGTTCACG TTACATCGCCTGAGT pflB 3455781 - 3453487 - | formate acetyltransferase TERM 4479 3454104 - 3454114 + g 74 -6.8 -4.2558 | CAATAGCAAAGTCGA TGGC AAG GCCA TTTTCGTCGCGAATC TERM 4480 3455309 - 3455277 - G 91 -14.1 -3.05294 | opp_overlap 3455267, overlap 3455267 3455258 GCAAACCGGTTAATA CGCCGGATTTACGGC AGC GCAGCATATCCGGCG AGTAAACATCGAATA TERM 4481 3455377 - 3455408 + g 74 -6.6 -4.35461 | gap 1 ATATTCAAAATCGGC GTCCATTTCGCGGCC ATA GGC-GTGGAATGAAC TTTTGATCATGTTAA ackA 3457023 - 3455815 - | acetate kinase tdcC 3458421 - 3457090 - | threonine/serine transporter TERM 4482 3458323 - 3458308 - G 74 -4.6 -4.70659 | GCGGATAGGGAAAAA CAGCAC CCCG GCGCCG ATGGCGGTACCAAAT tdcB 3459431 - 3458442 - | threonine dehydratase, catabolic TERM 4483 3459082 - 3459092 + g 74 -6.8 -4.35524 | opp_overlap 3459076, overlap 3459076 GCCGAATAATCACAG GTGG CCG CCAC TTTTGACTTTGGCGC SeD_A3603 3460467 - 3459529 - | TDC operon transcriptional activator SeD_A3604 3461238 - 3461008 - | hypothetical protein TERM 4484 3461155 - 3461168 + g 86 -9.5 -4.3739 | opp_overlap 3461149 3461155 CCAGATAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAGATG TERM 4485 3461168 - 3461155 - G 100 -9.5 -4.96646 | opp_overlap 3461155, overlap 3461149 CCAGATAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAGATG TERM 4486 3461283 - 3461257 - R 73 -10.3 -3.04398 | gap 1, opp_overlap 3461263, overlap 3461263 GCCGCCCTGTAAAAG CA-AAAACCCGC CGAA GCGGGTTTTATG AAGAGGTGAAACTGA TERM 4487 3461276 - 3461263 - R 100 -9.5 -5.0925 | opp_overlap 3461263, overlap 3461257 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAGGTG TERM 4488 3461263 - 3461276 + r 87 -9.5 -4.3739 | opp_overlap 3461263 3461257 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAGGTG TERM 4489 3462090 - 3462114 + r 76 -9.1 -3.65827 | overlap 3462091 CGCCCCCATACCGCC TGCCGCGCCTG CGC CGGGCGCCGCC TTTACGTCGACATTC TERM 4490 3462091 - 3462113 + r 79 -12.6 -2.79175 | overlap 3462090 GCCCCCATACCGCCT GCCGCGCCTG CGC CGGGCGCCGC CTTTACGTCGACATT TERM 4491 3462490 - 3462452 - R 85 -12.5 -3.33261 | CGCCAATGCCGATAA TGATATTGCTTGCGCCG CTTTC CAGCGCCTGCAATATCA GCTCCCCCGTTCCCC TERM 4492 3462928 - 3462900 - R 71 -10.2 -2.64803 | overlap 3462897 3462896 CCAGCCTGAAATTCA GGCCCGGATCGC TACAC GCCATCCGGGCA CAACGTCGTTAGCGA garR 3463827 - 3462937 - | 2-hydroxy-3-oxopropionate reductase TERM 4493 3463300 - 3463311 + g 73 -5.8 -4.42788 | CAACGCCACGATCAC CTGG TTAG CCAG TTTTGTGACGTTGCC TERM 4494 3463497 - 3463511 + g 71 -10 -3.57561 | CAACGCCCTTCGCCT TCAGCG CAT CGCTGA TTTCACGGCTTGCCA garL 3464623 - 3463853 - | 2-dehydro-3-deoxyglucarate aldolase TERM 4495 3463984 - 3464001 + g 76 -12.7 -2.71712 | opp_overlap 3463982 3463981, overlap 3463969 3463983 CCGGCGCCAGAATGC CGCACGG TTTA CCGTGCG CTTTAGCGCGGGCGA TERM 4496 3464138 - 3464107 - G 90 -8 -4.82901 | TTGGGCCGACAAAAA TGCCATCAACGC CTTCCGTT GCGGCGATGGCA TCAACATTGTCGACA SeD_A3609 3464806 - 3464925 + | hypothetical protein TERM 4497 3465181 - 3465191 + F 81 -8.2 -4.53303 | opp_overlap 3465180 AAATTCGCCAGGAAT CGCC ATC GGCG TTTTATATAAAAGTA TERM 4498 3465824 - 3465804 - f 100 -12.5 -4.56597 | overlap 3465806 CTCGGTTGCGAAAAA CTGCAGCCG GAA CGGCTGCTG GAAGGCACCGAGGAT TERM 4499 3465822 - 3465806 - f 83 -13.7 -2.60032 | overlap 3465804 CGGTTGCGAAAAACT GCAGCCG GAA CGGCTGC TGGAAGGCACCGAGG TERM 4500 3465999 - 3465979 - f 79 -10.3 -3.57263 | AGCGCCAGCGCGAAA CCTGCCCGG CCT CCGAGCTGG TCGTCGGGATGCAGT TERM 4501 3466394 - 3466374 - f 72 -8.2 -3.72893 | opp_overlap 3466356 3466354 CAGCGCCCCACCAAA CGCGGCCT GATTT ACGCCGCG ACGCCCGCCAGCGAT TERM 4502 3466772 - 3466800 + F 100 -9.6 -5.055 | gap 1, overlap 3466774 ACCGCATAATCTGTA GACCGGGTAAGCG CCAG CGCT-ACCCGGTA TTTTTTCGCCCTTAG TERM 4503 3466774 - 3466798 + F 95 -12.2 -4.15235 | gap 1, overlap 3466772 CGCATAATCTGTAGA CCGGGTAAGCG CCAG CGCT-ACCCGG TATTTTTTCGCCCTT TERM 4504 3466829 - 3466847 + F 86 -5.3 -5.55664 | opp_overlap 3466832 AGTCTGTAGCCTGAA GTATGTC TGCCC GACATGC TTTTTTTACTCCTGA TERM 4505 3466973 - 3466962 - g 77 -4.4 -4.96996 | TTCAAAGAAAACAAA CGAA AGAT TTCG GAGGAAGGATGTTTA TERM 4506 3467494 - 3467481 - g 78 -2.3 -5.25803 | opp_overlap 3467482, overlap 3467482 AATTTGTAGAAAAAA CGGGT ATCG ACTCG TTAGCCATTGCTATC SeD_A3611 3466844 - 3467836 + | class II aldolase, tagatose bisphosphate family TERM 4507 3468412 - 3468385 - g 71 -9.8 -3.53091 | gap 1, overlap 3468386 ATGGTTGTCGCTAAA CGCGCCGCCTTGC TTT GCCAGGCAGCG-G AAACGACGGCGACCG SeD_A3612 3467956 - 3469227 + | D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit SeD_A3613 3469242 - 3469706 + | galactitol-specific phosphotransferase enzyme iia component SeD_A3614 3469737 - 3470021 + | galactitol-specific phosphotransferase enzyme iib component SeD_A3615 3470025 - 3471398 + | PTS family galactitol-specific enzyme IIC SeD_A3616 3471442 - 3472485 + | oxidoreductase, zinc-binding dehydrogenase family SeD_A3617 3472596 - 3473369 + | galactitol utilization operon repressor SeD_A3618 3474390 - 3473527 - | hypothetical protein TERM 4508 3474449 - 3474438 - H 79 -3 -5.41143 | overlap 3474441 CATTGCGTAAAAAAA TATC ACTG GATA CAGTATGGTACCCTC TERM 4509 3474859 - 3474832 - gH 78 -6.4 -4.61873 | gap 1, opp_overlap 3474858, overlap 3474853 CTGGATAAACTAAAA CCTGCCGACTTTG CGC CAAA-TCAGCAAG CGCGTTACTGGCAGG TERM 4510 3475919 - 3475897 - gH 80 -6.2 -4.8048 | overlap 3475898 GTGTTACAGCAAAAA TTCGGCTCCG TAG CCGAGCTGAA AATGGGCGTGAACGG TERM 4511 3475913 - 3475898 - gH 72 -9 -3.47806 | overlap 3475897 TGTTACAGCAAAAAT TCGGCT CCGT AGCCGA GCTGAAAATGGGCGT SeD_A3619 3474454 - 3476496 + | LppC family protein TERM 4512 3476546 - 3476505 - gf 72 -9.3 -3.61268 | gap 1, overlap 3476497 3476508 CAGCTAACGCGTAAA CAGGCTGGCGACGCGTGGGA AGC TGCCGCGCGTCGCTGGC-TG GAAAGCAAAGGACTG TERM 4513 3476544 - 3476508 - gf 76 -12.1 -2.62667 | overlap 3476497 3476505 CTAACGCGTAAACAG GCTGGCGACGCGTGGGA AGC TGCCGCGCGTCGCTGGC TGGAAAGCAAAGGAC SeD_A3620 3476454 - 3476849 + | conserved hypothetical protein TIGR00252 diaA 3476871 - 3477461 + | DnaA initiator-associating protein DiaA SeD_A3622 3477471 - 3478046 + | putative phospholipid-binding domain protein SeD_A3623 3478748 - 3478113 - | NAD dependent epimerase/dehydratase family protein TERM 4514 3479037 - 3479020 - g 89 -3.3 -5.72207 | GTGAAAGGAAAAAAA GGCGAGG CCAG CGTCACC ATTGATAAGGCTATT SeD_A3624 3478879 - 3479397 + | intracellular peptidase, PfpI family SeD_A3626 3479820 - 3479377 - | hypothetical protein SeD_A3625 3479813 - 3480175 + | GIY-YIG catalytic domain protein SeD_A3627 3480665 - 3480162 - | acetyltransferase, GNAT family SeD_A3628 3481183 - 3480659 - | sterol-binding protein TERM 4515 3481456 - 3481469 + G 80 -9.5 -4.06491 | opp_overlap 3481456 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4516 3481469 - 3481456 - g 83 -9.5 -4.18018 | opp_overlap 3481456 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4517 3481578 - 3481538 - g 95 -3.4 -5.81412 | gap 2 TTTACCGAAAAAAAA TTGCAG-GAAGC-GGTGA GTTTTGT TCACCAGCATCGCCGCAA ATTACACATCGCCAT SeD_A3629 3481400 - 3482395 + | peptidase, U32 family TERM 4518 3483210 - 3483198 - g 75 -6.9 -4.4078 | overlap 3483199 3483200 TCGCGCTAACGAAAA CGGCG GCG CGCCA TTAGCGCTTGCCGCG SeD_A3630 3482404 - 3483282 + | peptidase, U32 family TERM 4519 3484364 - 3484330 - g 71 -8.4 -3.89215 | overlap 3484324 GGTGATAAAGCGAAA GTCCGCCACGGGCTGG AAT CCATCCTGCGGGAGAC CCAGGCGGATGAAAT SeD_A3631 3483460 - 3484467 + | luciferase family protein SeD_A3632 3485164 - 3484445 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 4520 3484475 - 3484511 + g 100 -7.3 -5.42259 | opp_overlap 3484476, overlap 3484476 TGGGCTGATTTTATA ACGCCGATTTTCAAC GGTGATG GTTGGCAATCGGCGA TTTTTTTCGAAGTAA TERM 4521 3484476 - 3484510 + g 80 -10.8 -3.84633 | opp_overlap 3484476, overlap 3484475 GGGCTGATTTTATAA CGCCGATTTTCAAC GGTGATG GTTGGCAATCGGCG ATTTTTTTCGAAGTA TERM 4522 3484575 - 3484587 + g 73 -9.1 -3.77927 | overlap 3484574 TATTCCGGCCATGCT TGCGC CTG GCGCA TATTTTCGTCATTCA TERM 4523 3484821 - 3484834 + g 74 -6.7 -4.25056 | TGATAGCGGCTGTTT GGGTT AAGC AACCC TTTGTTGGTGGCATA TERM 4524 3485114 - 3485102 - G 75 -3.5 -4.88067 | AGTGAGCCAGAAAAA TTTTA AAA TAAAA GCGATAAACAGGCTC SeD_A3633 3485323 - 3485853 + | putative cytoplasmic protein TERM 4525 3485881 - 3485905 + T 74 -11.5 -2.79684 | opp_overlap 3485880 3485879 GACTTGTGAAATATT GCCGGATGA AAACAGC TCATCCGGC TCGTTCAATTACTGG mtr 3487158 - 3485914 - | tryptophan-specific transport protein Mtr TERM 4526 3487240 - 3487274 + r 82 -7.8 -4.55798 | opp_overlap 3487246, overlap 3487242 3487244 3487246 AGTACAAAAGAAATA AAAAAAGCCCCGATTG TGA CGATCGGGGCTGTATA TTTTACTTTACGCTG TERM 4527 3487242 - 3487272 + r 84 -10.4 -3.88396 | opp_overlap 3487246, overlap 3487240 3487244 3487246 TACAAAAGAAATAAA AAAAGCCCCGATTG TGA CGATCGGGGCTGTA TATTTTACTTTACGC TERM 4528 3487244 - 3487270 + r 90 -13 -3.51998 | opp_overlap 3487246, overlap 3487242 3487240 3487246 CAAAAGAAATAAAAA AAGCCCCGATTG TGA CGATCGGGGCTG TATATTTTACTTTAC TERM 4529 3487268 - 3487246 - R 100 -13.4 -6.11392 | opp_overlap 3487246 3487244 3487242 3487240 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT TERM 4530 3487246 - 3487268 + r 100 -15.6 -3.31476 | opp_overlap 3487246, overlap 3487244 3487242 3487240 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT deaD 3489201 - 3487312 - | cold-shock DEAD box protein A TERM 4531 3488033 - 3488043 + g 73 -5.4 -4.56597 | overlap 3488020 AGTTGCTGCTGAACT TTCG CGG CGAA TTTTTCCAGACGGCG TERM 4532 3489346 - 3489321 - R 73 -7.5 -4.04023 | overlap 3489322 ATTAACGAACAACAA CGCCCTCACCC GCGA AGGTGATGGCA ATCAAAAAGATTACG nlpI 3490264 - 3489380 - | lipoprotein NlpI TERM 4533 3490335 - 3490369 + r 76 -12 -2.56715 | opp_overlap 3490342, overlap 3490330 AAGGCGTCCAGCCAG GTCTAAAGCCCTCCGC ACT GCGGAGGGCAAAAGGC TACCTTACTCGGCCT TERM 4534 3490362 - 3490342 - R 100 -18.3 -3.57792 | opp_overlap 3490335 3490330 CCAGCCAGGTCTAAA GCCCTCCGC ACT GCGGAGGGC AAAAGGCTACCTTAC TERM 4535 3492728 - 3492712 - R 100 -10.8 -5.00884 | opp_overlap 3492712 3492711 3492709 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC TERM 4536 3492712 - 3492728 + r 71 -10.8 -2.71422 | opp_overlap 3492712, overlap 3492711 3492709 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC rpsO 3493020 - 3492751 - | ribosomal protein S15 TERM 4537 3492855 - 3492876 + g 84 -2.9 -5.34555 | opp_overlap 3492848 3492857, overlap 3492857 3492858 AAACCATACGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTATGCTCTGC truB 3494115 - 3493171 - | tRNA pseudouridine synthase B TERM 4538 3493386 - 3493359 - G 71 -8.4 -3.77588 | opp_overlap 3493364, overlap 3493361 ACGGCAGATTAACAA CAGGATAGTCCG AAGC CGGACTATCCAT TGGCATCAATAATGG TERM 4539 3493384 - 3493361 - G 95 -15.4 -3.46982 | opp_overlap 3493364, overlap 3493359 GGCAGATTAACAACA GGATAGTCCG AAGC CGGACTATCC ATTGGCATCAATAAT TERM 4540 3493972 - 3494004 + g 75 -12.6 -2.6176 | overlap 3493971 GCCGGTCGCCAGCGG GTCCAGCGCGCCGG TATGC CCGGCGCGGTTGGC ATTGTAGATGCGCTT rbfA 3494516 - 3494115 - | ribosome-binding factor A TERM 4541 3494559 - 3494547 - R 100 -6.9 -5.90231 | opp_overlap 3494547 3494547 ATAAAGACAAAAAAA GGGCC ATA AGCCC CTTTTTAAATTTCTT TERM 4542 3494547 - 3494560 + r 71 -3.7 -4.86939 | opp_overlap 3494547, overlap 3494547 ATAAAGACAAAAAAA GGGCC ATAA GCCCC TTTTTAAATTTCTTG infB 3497415 - 3494737 - | translation initiation factor IF-2 TERM 4543 3496603 - 3496614 + g 84 -5.8 -5.00616 | ATCGGCTTTGGATTC GGCA TGTT TGCC TTTTTTCGCCGGACG TERM 4544 3497266 - 3497256 - G 74 -8.2 -3.96624 | opp_overlap 3497239 TATCGGGACCAGAAA CCGC TTC GCGG TTCAGGTGCGCCAGT nusA 3498942 - 3497440 - | transcription termination/antitermination factor NusA TERM 4545 3498348 - 3498360 + g 71 -10.5 -3.31144 | opp_overlap 3498343 GGGTGACGAACAGCT GCGCG CCA CGCGC TTCTGGACGTACAGC TERM 4546 3498883 - 3498894 + g 75 -3.6 -4.8622 | TTCAAAAATTTTTTC GCGT GGCA GCGC TTTTTCGTTGGAGAC SeD_A3645 3499422 - 3498970 - | hypothetical protein TERM 4547 3499459 - 3499447 - H 93 -6.9 -5.80248 | opp_overlap 3499446 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4548 3499488 - 3499503 + H 72 -10.4 -2.79878 | opp_overlap 3499488, overlap 3499487 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA TERM 4549 3499503 - 3499488 - H 100 -10.4 -5.60689 | opp_overlap 3499488 3499487 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA argG 3500050 - 3501393 + | argininosuccinate synthase TERM 4550 3501430 - 3501415 - f 78 -11.8 -3.08679 | opp_overlap 3501415 GTCGTTGATGCAACA GGCCGC GAAA GCGGCC TTTTTTATTGCCAGC TERM 4551 3501415 - 3501430 + F 100 -11.8 -5.4505 | opp_overlap 3501415 GTCGTTGATGCAACA GGCCGC GAAA GCGGCC TTTTTTATTGCCAGC TERM 4552 3501720 - 3501705 - g 72 -2.5 -4.95896 | overlap 3501716 AGAAATTCAGAAAAA TCACC AACATA GGCGA GTATTCTCCACTGCT SeD_A3648 3501551 - 3502510 + | hypothetical protein TERM 4553 3502588 - 3502555 - T 70 -9.7 -3.06696 | opp_overlap 3502564, overlap 3502564 TCCGTTTTCAACAGA CGAAAAAAAGACGCT TTTC AGCGTCTTTTTCCTG GAATATTGGTACCGA TERM 4554 3502579 - 3502564 - T 100 -9 -5.62219 | opp_overlap 3502564, overlap 3502555 AACAGACGAAAAAAA GACGCT TTTC AGCGTC TTTTTCCTGGAATAT TERM 4555 3502564 - 3502579 + T 93 -9 -4.74132 | opp_overlap 3502564 3502555 AACAGACGAAAAAAA GACGCT TTTC AGCGTC TTTTTCCTGGAATAT secG 3503027 - 3502695 - | preprotein translocase, SecG subunit TERM 4556 3503215 - 3503230 + r 100 -11.8 -4.77157 | TTTTGCGGGCCGTAA GGCGGC AACC GCCGCC TTTTTAGTCACTTAA glmM 3504587 - 3503250 - | phosphoglucosamine mutase folP 3505428 - 3504580 - | dihydropteroate synthase TERM 4557 3505493 - 3505474 - gR 100 -12.8 -5.86609 | opp_overlap 3505474 TTAAAAAAAGAAAAA CCCCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA TERM 4558 3505474 - 3505493 + Gr 79 -10.6 -3.6502 | opp_overlap 3505474 TTAAAAAAAGAAAAA CCCCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA SeD_A3652 3505381 - 3505509 + | hypothetical protein hflB 3507476 - 3505533 - | ATP-dependent metallopeptidase HflB TERM 4559 3506565 - 3506533 - G 91 -11.9 -4.11394 | opp_overlap 3506524 3506555 ACCTGACGGTCAAAA CGACCTGGACGCAGC AGC GCCGGGTCCAGAACG TCCGGACGGTTGGTT rrmJ 3508197 - 3507571 - | ribosomal RNA large subunit methyltransferase J TERM 4560 3508099 - 3508111 + g 77 -4.7 -4.84761 | opp_overlap 3508090 3508093, overlap 3508093 TTTAAACCAGGCACG GGAGC GTA GCCCC TTTTTCTGCGCCTGT TERM 4561 3508365 - 3508348 - g 90 -4.9 -5.34309 | gap 1 AGTACTAAACAAAAA CAGCACCT AAA AGGT-CTG GCACATCCGCTCAAG SeD_A3656 3508285 - 3508617 + | putative RNA-binding protein TERM 4562 3508703 - 3508730 + T 86 -13.6 -3.25946 | gap 1, opp_overlap 3508710, overlap 3508710 CACGCTCTCTCCGTT GATAAAAGGCCGC TAT GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4563 3508724 - 3508710 - T 95 -12.8 -4.36914 | opp_overlap 3508710 3508703 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA TERM 4564 3508710 - 3508724 + T 100 -12.8 -5.13137 | opp_overlap 3508710, overlap 3508703 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA greA 3509249 - 3508773 - | transcription elongation factor GreA TERM 4565 3508811 - 3508822 + g 77 -7.2 -4.25104 | CTTCGTATTCCACAT CGCC GCCA GGCG TTTTGATCACCACGA TERM 4566 3509379 - 3509352 - H 70 -4.8 -4.46828 | AGAAGCAAAAAAACA CCAACCCGGG CGCGCAGT CCCAGGTCAG CTACAATTTCCTCTT TERM 4567 3509968 - 3509938 - g 71 -7.4 -3.97947 | GCCAGCCACGATAAA GCGCCAGGCTGGCC GTG GAACGACCTGACGC AGTGTTTCAGCGCGC dacB 3509497 - 3510930 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 4568 3511013 - 3510994 - g 100 -10.6 -4.91285 | opp_overlap 3510989 3510994, overlap 3510995 ACGAACATAATAAAA TGGGCCGC AAAT GCGGCCCG TTGGCTTTTGTAGGC TERM 4569 3510994 - 3511013 + G 84 -12.8 -3.41587 | opp_overlap 3510994 3510995, overlap 3510989 ACGAACATAATAAAA TGGGCCGC AAAT GCGGCCCG TTGGCTTTTGTAGGC TERM 4570 3511012 - 3510995 - g 95 -14.1 -3.53144 | opp_overlap 3510994 3510989, overlap 3510994 CGAACATAATAAAAT GGGCCGC AAAT GCGGCCC GTTGGCTTTTGTAGG SeD_A3659 3510939 - 3511064 + | hypothetical protein SeD_A3660 3512233 - 3511061 - | GTP-binding protein Obg/CgtA TERM 4571 3511411 - 3511427 + g 71 -7.9 -3.94933 | opp_overlap 3511400, overlap 3511408 3511413 ACCAGCGCGGTTTAG CCGCCAG ATC CTGGCTG TATTTTTCCAGTTCG TERM 4572 3513025 - 3513038 + r 74 -3.7 -4.91852 | opp_overlap 3513006 3513025 GCTTACGAAAAATAC GCAGC GGCG GCAGC TTTCTTTTTACTGCC TERM 4573 3513285 - 3513305 + r 100 -14 -3.794 | opp_overlap 3513285 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG TERM 4574 3513305 - 3513285 - R 100 -14 -4.75174 | opp_overlap 3513285 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG rpmA 3513591 - 3513334 - | ribosomal protein L27 TERM 4575 3515086 - 3515062 - g 76 -9.3 -3.95051 | opp_overlap 3515068, overlap 3515054 GAAGAAGCCGACAAA GCGATATCCGC GTT GCAGATATTGC CGGATACCCCATGGC ispB 3514039 - 3515151 + | octaprenyl-diphosphate synthase SeD_A3665 3515383 - 3515670 + | transcriptional regulator TERM 4576 3515712 - 3515683 - T 83 -10 -4.08692 | opp_overlap 3515686, overlap 3515686 TAAGCGCCTGTAAAA TACCCCCCGCAA TCGCGT TCGCGGGGGTTA TTCAGCGTACAGAAG TERM 4577 3515709 - 3515686 - T 77 -11.7 -2.78032 | opp_overlap 3515686, overlap 3515683 GCGCCTGTAAAATAC CCCCCGCAA TCGCGT TCGCGGGGG TTATTCAGCGTACAG TERM 4578 3515686 - 3515709 + T 75 -9.6 -3.63515 | gap 1, opp_overlap 3515683 3515686 GCGCCTGTAAAATAC CCCCCGC-AAT CGC GTTCGCGGGGG TTATTCAGCGTACAG murA 3516988 - 3515729 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase SeD_A3667 3517296 - 3517042 - | protein YrbA TERM 4579 3517460 - 3517478 + r 71 -10.3 -2.62192 | opp_overlap 3517426, overlap 3517459 3517455 TCATGCGAAGTGTAG GCCGGAT AAACC ATCCGGC ATTCATTACATACGG SeD_A3668 3517780 - 3517484 - | putative stas domain protein TERM 4580 3517564 - 3517580 + g 74 -2.1 -5.12617 | opp_overlap 3517540, overlap 3517565 TAACGCCAGACAGCG ACACGGC ATT GCCCTGC TTTTTTGCCTGGTTC ttg2D 3518415 - 3517780 - | toluene tolerance protein Ttg2D SeD_A3670 3518985 - 3518434 - | Mce family protein SeD_A3671 3519772 - 3518990 - | toluene ABC transporter, permease protein TERM 4581 3519076 - 3519037 - G 70 -10 -3.3164 | gap 1, opp_overlap 3519049 AATCCAGCCCCAGAA CGGCCAACGATGCGTGAAC CAC GGT-ACGCGTCGTTGCCCG GCTAATCCCGGCAGA TERM 4582 3519644 - 3519631 - G 74 -8.1 -4.0162 | opp_overlap 3519635, overlap 3519616 CGCCCACATTATAAA GCTGG CGCA CCAGC AGCGGCGCATGTTTG SeD_A3672 3520592 - 3519780 - | toluene ABC transporter, ATP-binding protein TERM 4583 3521306 - 3521329 + G 73 -8.8 -3.8211 | gap 1, opp_overlap 3521274 CTGGCGGAGCTGCCG CGCGAAGGCGG GCT CC-CCGTCGCG TTCTTATGGCTGGGC TERM 4584 3521545 - 3521507 - g 74 -7.4 -4.07568 | opp_overlap 3521506 3521505, overlap 3521515 GCCGGCGTGCGAAAA GGCGAAAATGATATTGCC GTT GGTAATCTCATTGGCGCC AATATTTTTAATCTC SeD_A3673 3520805 - 3521782 + | sodium/calcium exchanger protein kdsD 3521796 - 3522782 + | arabinose 5-phosphate isomerase TERM 4585 3523130 - 3523108 - g 74 -9.8 -3.66844 | opp_overlap 3523113 GGGACAGTCGAATAA GCTGATCGCC TTT AGCGATCTGC TGGAAAAACTGGCCA kdsC 3522803 - 3523369 + | 3-deoxy-manno-octulosonate-8-phosphatase SeD_A3676 3523366 - 3523941 + | hypothetical protein TERM 4586 3524345 - 3524331 - gf 73 -5.7 -4.37886 | TTACCGGCGACAAAA TCACC TACCT GGTGA AAGAGCAGAAAATGC TERM 4587 3524446 - 3524432 - gf 76 -3.4 -5.05037 | overlap 3524433 CAAGACAAAAACAAA GGCCAG ACT CCGGCG CAAAAGAAGAGTAAC lptA 3523910 - 3524464 + | lipopolysaccharide ABC transporter, periplasmic lipopolysaccharide-binding protein lptB 3524471 - 3525196 + | lipopolysaccharide ABC transporter, ATP-binding protein TERM 4588 3526248 - 3526238 - g 74 -3.2 -4.84017 | overlap 3526226 3526247 AATGGCTGATAAAAA GCCT TGA AAGC CGCAACGACACGCTG TERM 4589 3526281 - 3526247 - g 76 -10.7 -3.61889 | gap 1, overlap 3526238 3526259 TAAAAAGCCTTGAAA GCCGCAAC-GACACGC TGCT GCGCGTCAGTCGCTGC ATCGTCGAGCAACAG rpoN 3525244 - 3526677 + | RNA polymerase sigma-54 factor yfiA 3526700 - 3526987 + | ribosomal subunit interface protein TERM 4590 3527015 - 3527041 + F 95 -13 -3.92522 | overlap 3527010 3527016 TTAGCCAGTGCAGGA CGGCCTGTTGTG TGA CACAACGGGCCA TTTGTACAGTTAGCG TERM 4591 3527016 - 3527040 + F 100 -16.5 -2.95192 | overlap 3527010 3527015 TAGCCAGTGCAGGAC GGCCTGTTGTG TGA CACAACGGGCC ATTTGTACAGTTAGC ptsN 3527105 - 3527596 + | PTS IIA-like nitrogen-regulatory protein PtsN SeD_A3682 3527642 - 3528496 + | hypothetical protein TERM 4592 3528547 - 3528528 - g 70 -9.2 -3.75105 | overlap 3528521 TGAAGTCACCAATAA GCTGGGCA TGCA TGCCCGGC CTGCCATGAAGCTTT ptsO 3528493 - 3528765 + | phosphocarrier protein NPr SeD_A3684 3529015 - 3529647 + | hypothetical protein mtgA 3530450 - 3529722 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 4593 3530369 - 3530332 - G 87 -8.3 -4.58663 | overlap 3530355 ATCACCGCCGAAAAA GGCACCGGAACCACGCT AAAC AGCGCAATGCCGCCGCC CCAAAAGACGGCGAG TERM 4594 3530427 - 3530441 + g 73 -9.2 -3.84246 | opp_overlap 3530422 GCGCAAAAACGTTAA CGGCGC GAT GCGTCG TTTGCTCATTCCGCC elbB 3531100 - 3530447 - | enhancing lycopene biosynthesis protein 2 TERM 4595 3531307 - 3531329 + r 100 -7.6 -5.77853 | overlap 3531308 3531310 TGGCGCAGTATTCGC GCACCCCGGT CAA ACCGGGGTCA TTTTTTTTCCGCGTT TERM 4596 3531308 - 3531328 + r 89 -11.1 -4.05085 | overlap 3531307 3531310 GGCGCAGTATTCGCG CACCCCGGT CAA ACCGGGGTC ATTTTTTTTCCGCGT TERM 4597 3531310 - 3531326 + r 93 -13.7 -3.60685 | overlap 3531308 3531307 CGCAGTATTCGCGCA CCCCGGT CAA ACCGGGG TCATTTTTTTTCCGC SeD_A3688 3533663 - 3531327 - | aerobic respiration control sensor protein ArcB TERM 4598 3532470 - 3532460 - G 70 -5.4 -4.44974 | TCAAATTCCATAAAA TCTG GCG CAGA CGCGTTCCGTCGGTA SeD_A3689 3534686 - 3533757 - | radical SAM protein, TIGR01212 family TERM 4599 3536534 - 3536522 - H 84 -10.5 -3.86822 | GAAGTGGTCGAGAAA GGCCG CGT CGGCC CAGGCGAGCTGATGG TERM 4600 3537681 - 3537665 - H 79 -10.8 -3.55622 | CTGAATCTCTCCAAA CGCGCC TGGCT GGCGCG CAAACCCATTAGCCC TERM 4601 3538167 - 3538151 - H 71 -7.9 -3.84825 | overlap 3538152 GTGATTCAGATTAAA GTCGCGC AGG GCGCGAA ACCGGGCGAAGGCGG TERM 4602 3538166 - 3538152 - H 74 -11.4 -2.90573 | overlap 3538151 TGATTCAGATTAAAG TCGCGC AGG GCGCGA AACCGGGCGAAGGCG TERM 4603 3538993 - 3538972 - H 87 -10.1 -4.21812 | CTGCACCGAAAATAA CCCGCCGTT TGAT AACGGCGTG CTGAATGCGCAACTG TERM 4604 3540315 - 3540282 - g 84 -13.1 -3.36175 | gap 1, overlap 3540269 AACGGGTAGCGATAA TCGGCGCAGGTCCGGC AGG GCTGG-CGTGCGCCGA CGTGCTGACCCGCAA gltD 3539828 - 3541246 + | glutamate synthase (NADPH), small subunit TERM 4605 3541252 - 3541295 + F 71 -10 -3.214 | overlap 3541250 3541253 CGAAGTATAACCCTT CCGGCTCCCCCGCTTACTGC CTTG GCTGATGGCTGGGGAGCCGA TATTCCTCTCCTCAA TERM 4606 3541253 - 3541294 + F 80 -13.5 -2.52519 | overlap 3541252 3541250 GAAGTATAACCCTTC CGGCTCCCCCGCTTACTGC CTTG GCTGATGGCTGGGGAGCCG ATATTCCTCTCCTCA TERM 4607 3541682 - 3541698 + G 83 -7.9 -4.56597 | opp_overlap 3541684, overlap 3541684 TCGGTAGATTTAAGT CAGCGCT ATA AGCGCGG TTTTTCCACCAGAAA TERM 4608 3541790 - 3541755 - g 100 -17.2 -3.06696 | gap 1, opp_overlap 3541761, overlap 3541761 TTTGTTTTCAACACA TTG-AAATTCCGCAGAC ACT GTCTGCGGAATTTTCAA ATCTCATACCGCTCG TERM 4609 3541783 - 3541761 - g 100 -16.4 -3.76775 | opp_overlap 3541761, overlap 3541755 TTCAACACATTGAAA TTCCGCAGAC ACT GTCTGCGGAA TTTTCAAATCTCATA TERM 4610 3541761 - 3541783 + G 100 -16.4 -4.17657 | opp_overlap 3541761 3541755 TTCAACACATTGAAA TTCCGCAGAC ACT GTCTGCGGAA TTTTCAAATCTCATA SeD_A3692 3541472 - 3542557 + | hypothetical protein TERM 4611 3543354 - 3543364 + G 91 -6.8 -5.14563 | AGCGCCGTACTGATT GCGA TGG TCGC TTTTTTCCTCGGCAA SeD_A3693 3542649 - 3543926 + | cytosine permease SeD_A3694 3543913 - 3545193 + | cytosine deaminase SeD_A3695 3545742 - 3545275 - | putative cytoplasmic protein TERM 4612 3545632 - 3545643 + g 71 -7.2 -3.96327 | opp_overlap 3545630 GCCCTGCAATTCATA GCGC CCCG GCGC TTTCTCCTGCGGCCT SeD_A3696 3546614 - 3545739 - | putative N-acetylmannosamine kinase SeD_A3697 3547300 - 3546611 - | bifunctional enzyme NanE/nanK TERM 4613 3547343 - 3547317 - R 77 -9.4 -3.86346 | overlap 3547319 CTACTCCCTTACAAA TATTGCCCGGTT GAA AACCGGGCAAGC GGATTAACTTTTCGT TERM 4614 3547341 - 3547319 - R 100 -16.4 -3.52113 | overlap 3547317 ACTCCCTTACAAATA TTGCCCGGTT GAA AACCGGGCAA GCGGATTAACTTTTC SeD_A3698 3548837 - 3547347 - | putative sialic acid transporter TERM 4615 3547584 - 3547611 + g 70 -9.7 -3.35679 | CGCTCCCAGGATCGG CGCCAGCGCGC CGCCGA GCGCGCCGACG TTATAAGTAAAGCCC TERM 4616 3548014 - 3547988 - G 71 -11.6 -2.92386 | overlap 3547985 3547983 GGAAAGCAAACAGTA CCACCAGCATCA GCA TGACGCCAGTGG GCCAGCGTTTACCGC nanA 3549846 - 3548953 - | N-acetylneuraminate lyase TERM 4617 3549973 - 3549988 + r 79 -3.2 -5.32608 | overlap 3549967 AACCGGGATCGGAGG TGCGAT CGCT ACCGCA TTTTTTGACTTTTTT SeD_A3700 3550763 - 3549981 - | transcriptional regulator NanR TERM 4618 3550855 - 3550880 + r 76 -7.5 -4.25256 | opp_overlap 3550859, overlap 3550859 GCGAGGAGGCCAAAC AAAACAGGCCC TTCA GGGCCTGTTGA TTATTTTACTACGCG TERM 4619 3550876 - 3550859 - R 100 -12.7 -4.88918 | opp_overlap 3550855 3550859 GGAGGCCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA TERM 4620 3550859 - 3550876 + r 93 -12.7 -3.70405 | opp_overlap 3550859, overlap 3550855 GGAGGCCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA sspB 3551381 - 3550881 - | stringent starvation protein B sspA 3552025 - 3551387 - | stringent starvation protein A TERM 4621 3553188 - 3553201 + r 100 -9.5 -5.08824 | opp_overlap 3553188 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCTAACAG TERM 4622 3553201 - 3553188 - R 100 -9.5 -5.64274 | opp_overlap 3553188 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCTAACAG rpsI 3553632 - 3553240 - | ribosomal protein S9 rplM 3554076 - 3553648 - | ribosomal protein L13 SeD_A3706 3555502 - 3554378 - | ATPase, AFG1 family TERM 4623 3555288 - 3555314 + g 81 -6.6 -4.68994 | CACATATACAGCCCG CGAACCGG TATTTGCGCGT CCGGTTCG TTTTTGCCTAATAAT SeD_A3707 3555695 - 3556093 + | hypothetical protein TERM 4624 3556118 - 3556136 + F 79 -11.7 -3.13082 | opp_overlap 3556116, overlap 3556116 3556114 GTTAAGAAATTTATC GGGCGCA TCGCT TGCGCCC TCTCTCTATCTTTCC TERM 4625 3557474 - 3557448 - g 77 -3.5 -5.02476 | opp_overlap 3557449, overlap 3557449 3557451 ATAGCGTCGAAAAAA GCAGTCCTGCC GCGCA GGCCGGTTTGC AAAAAGATGATGTTA TERM 4626 3557494 - 3557480 - g 83 -7.2 -4.56597 | GCCGGTTTGCAAAAA GATGAT GTT ATCATC GGCGTTAACCGCGAT SeD_A3708 3556250 - 3557617 + | protease DegQ degS 3557710 - 3558780 + | periplasmic serine peptidase DegS TERM 4627 3558805 - 3558783 - T 100 -12 -4.4078 | opp_overlap 3558767 3558786 GGCGTCGAACTAAAA CGACGCGG CTTTTGC CCGCGTCG TTCGACGACTAGTCA SeD_A3710 3559476 - 3558814 - | putative inner membrane protein TERM 4628 3558996 - 3559013 + g 70 -7 -4.07568 | GTTGCGCCTGTTGAC GCGCAT ACTGCG ATGCGC TTTTCCAGGCAACCA TERM 4629 3559530 - 3559554 + r 77 -11.4 -3.20991 | overlap 3559526 CTGTGTCCTCATTTT GCGGGAGCAG AATCA CTGCTCCCGA TTAGATTGGATTACA SeD_A3711 3560866 - 3559565 - | oxaloacetate decarboxylase beta chain oadA 3562651 - 3560879 - | oxaloacetate decarboxylase alpha subunit TERM 4630 3561292 - 3561308 + g 74 -7.2 -4.10453 | opp_overlap 3561291, overlap 3561271 GCAGTGGCTCAAACG CCGCCG GGTTA TGGCGG TTTTCGAGGAATTTC SeD_A3713 3562909 - 3562667 - | oxaloacetate decarboxylase gamma chain 2 SeD_A3714 3563683 - 3563066 - | L(+)-tartrate dehydratase subunit beta SeD_A3715 3564582 - 3563683 - | L(+)-tartrate dehydratase subunit alpha SeD_A3716 3565883 - 3564615 - | anion transporter TERM 4631 3565340 - 3565351 + g 78 -5.8 -4.74706 | TGCCGCAGATGAGCA TCGG GAGA CCGA TTTTTGCGTATTCAA SeD_A3717 3566759 - 3566094 - | transcriptional regulator SeD_A3718 3567375 - 3566746 - | putative GntR-family transcriptional regulator TERM 4632 3567276 - 3567294 + g 75 -5.9 -4.66537 | CCGCAATACTTTCCT GCGCGAG TTCTT CTCCCGC TTTTATATTGCCGGA TERM 4633 3567478 - 3567459 - R 95 -12.8 -3.98913 | overlap 3567471 TTTACAGTCAAAGAA GCCGGAGC AAAA GCCCCGGC ATCGGGCAGGAACAG mdh 3568433 - 3567495 - | malate dehydrogenase, NAD-dependent TERM 4634 3567663 - 3567649 - G 70 -5.6 -4.38927 | GGCTGAGAGAAGAAA CGGGCA TAC TGACCG TCGCCTTCCACATAG TERM 4635 3568001 - 3568011 + g 75 -4 -4.95155 | opp_overlap 3567985 CCAGCGTGGTAACGC CAAA CAG TTTG TTTTTGTCGTATACG argR 3568848 - 3569318 + | arginine repressor TERM 4636 3569323 - 3569353 + F 80 -6 -4.95155 | overlap 3569324 3569325 AAGAGCTTTAGTCCC ACTTCCTCCGTCGT CGT ACGGCGGAGGCACC TTTTTGTCCTCTCCC TERM 4637 3569324 - 3569352 + F 75 -9.5 -3.5637 | overlap 3569323 3569325 AGAGCTTTAGTCCCA CTTCCTCCGTCGT CGT ACGGCGGAGGCAC CTTTTTGTCCTCTCC TERM 4638 3569325 - 3569351 + F 81 -13 -2.73099 | overlap 3569324 3569323 GAGCTTTAGTCCCAC TTCCTCCGTCGT CGT ACGGCGGAGGCA CCTTTTTGTCCTCTC TERM 4639 3569557 - 3569547 - f 79 -2.6 -5.27923 | opp_overlap 3569547, overlap 3569552 TAACGTTATAAAAAA TAAA ATT TTTA ATGTCTTTAAAAAGC TERM 4640 3569570 - 3569552 - f 85 -3.3 -5.49579 | opp_overlap 3569547, overlap 3569547 TTATAAAAAATAAAA TTTTTAA TGTCT TTAAAAA GCAGAAACAATTAGC SeD_A3721 3569683 - 3569946 + | protein YhcN SeD_A3722 3570050 - 3570316 + | hypothetical protein TERM 4641 3570343 - 3570361 + T 100 -13.1 -5.47914 | CTAACCCGACGACTT GCCCCCG CCTGT CGGGGGC TTTTTTATGCTTTTT SeD_A3723 3570648 - 3570376 - | barstar TERM 4642 3570592 - 3570605 + g 74 -6.7 -4.3623 | opp_overlap 3570604 CGTCTGCGTAAACTC GCGAT AAAA ATCGC TTTGGTTTTTAATAT TERM 4643 3570668 - 3570681 + r 72 -6.7 -4.30576 | overlap 3570666 AGCCACCATCCCCGA CAGAC AATT GTCTG TTTTACTACTAAGCA TERM 4644 3570738 - 3570755 + r 74 -3.3 -5.03994 | AAACGCTTTTAGCCC CGGAGCA CTCT TGCGCTG TTTTTGTATCTCAAA TERM 4645 3570809 - 3570791 - R 100 -8.1 -5.65177 | opp_overlap 3570791 ATAGTCATAAAAAAA CCGACGC TTTTG GCATCGG TTCTTGTGGGTTAGC aaeB 3572787 - 3570820 - | p-hydroxybenzoic acid efflux pump subunit aaeB aaeA 3573725 - 3572793 - | p-hydroxybenzoic acid efflux pump subunit aaeA TERM 4646 3573372 - 3573413 + g 72 -3.5 -4.72272 | gap 1, overlap 3573373 3573400 CTCTTCCCGGGACAT CGCCTGTACGCCGAGGCG ATTACGG CGAC-CGGCTTCCTGGCG TTTTTCCTGCGCCAG aaeX 3573936 - 3573733 - | protein AaeX aaeR 3574118 - 3575047 + | transcriptional activator AaeR TERM 4647 3575115 - 3575168 + T 73 -9.8 -3.32844 | gap 3, opp_overlap 3575150 3575160, overlap 3575115 GACATTGCCTGGTGG C-G-CTGCGCTTATCAGGCCTGGGG GCACATA CCACAGGCCTGATAAG-GCGGACAG TTATGCGGTGCCGCC tldD 3576614 - 3575169 - | protein TldD TERM 4648 3575993 - 3576026 + g 70 -8.7 -3.69332 | gap 1, opp_overlap 3575994, overlap 3575994 AATACTCATAACCAA AGCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGCG TTTACCGTCTTCTTC TERM 4649 3575994 - 3576025 + g 72 -12.2 -2.80876 | gap 1, opp_overlap 3575994, overlap 3575993 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4650 3576025 - 3575994 - G 90 -12.2 -4.0127 | gap 1, opp_overlap 3575994 3575993 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4651 3576270 - 3576286 + g 74 -4.4 -4.75776 | gap 1 GTAGAGCGGCTGATG CGCTACG GCGG CG-AGCG TTTTTACCTTGCCTT SeD_A3729 3580559 - 3576759 - | hypothetical protein cafA 3582139 - 3580670 - | ribonuclease G TERM 4652 3580882 - 3580893 + g 75 -5.8 -4.62069 | opp_overlap 3580880 3580882 TGATCTCATAACAGA CGGT TTCC ACCG TTTTTACCGTCCCGC TERM 4653 3581496 - 3581475 - G 71 -10.1 -3.55444 | TGCGCATCGGCGAAA TCGCGCAGC ACGC GCTGCGCCA GCGCCAGTTCGCCAT TERM 4654 3581524 - 3581537 + g 71 -4.5 -4.62783 | CATACATCTGGTAGC GCGTT TGCG GACGC TTTTTGCGCTCCATG maf 3582722 - 3582129 - | septum formation protein Maf mreD 3583222 - 3582731 - | rod shape-determining protein MreD mreC 3584274 - 3583222 - | rod shape-determining protein MreC TERM 4655 3583951 - 3583980 + g 71 -7.7 -3.96148 | overlap 3583959 ACGCAGCGGCGACCC CAGCAGCTCGCGC AACC GCGCGTTCTCCTG TTTGTACTGCCCCAG TERM 4656 3583959 - 3583972 + g 71 -9.5 -3.59024 | overlap 3583951 GCGACCCCAGCAGCT CGCGC AACC GCGCG TTCTCCTGTTTGTAC TERM 4657 3583999 - 3584011 + g 80 -4.8 -5.03715 | overlap 3584009 GTACTGCCCCAGCAT CAGC AGGTC GCTG TTTTTTAGCAGTAAT mreB 3585382 - 3584339 - | rod shape-determining protein MreB SeD_A3735 3587630 - 3585690 - | cyclic diguanylate phosphodiesterase (EAL) domain protein TERM 4658 3585856 - 3585833 - G 74 -10.2 -3.53012 | CGCCCGTCGCGTAAA CCTGCGTAGG CGTA CCCGCGCAGG CCTCTACCAGACTTT TERM 4659 3585875 - 3585885 + g 74 -6.8 -4.29845 | CTACCAGACTTTGAA CCAG AAG CTGG TTTTCCGTTCGCTTC TERM 4660 3588204 - 3588216 + G 70 -6.9 -4.08945 | overlap 3588205 3588211 GTAACGCCATGATCA TCGGC ACC GCCGG TTTTACCGCCATGCT SeD_A3736 3587834 - 3588808 + | protein YhdH TERM 4661 3588960 - 3588970 + G 87 -2.4 -5.60993 | GAAGCCGATGTGACT GCGG AAT CGGC TTTTTTTATGCAGCG TERM 4662 3589222 - 3589212 - g 71 -8.2 -3.85698 | overlap 3589213 TTTGGCCTTGATAAA GCCG ACC CGGC GGCCAATGCCGGAAG SeD_A3737 3588921 - 3589925 + | protein YedY SeD_A3738 3589926 - 3590525 + | membrane protein YedZ accB 3590918 - 3591388 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 4663 3591754 - 3591717 - g 74 -10.6 -3.53811 | gap 1 TTTATCGGCCCGAAA GCGGACACCAT-CCGCC TGATG GGCGATAAAGTGTCCGC GATTACCGCGATGAA TERM 4664 3591810 - 3591774 - g 85 -4.4 -5.14965 | overlap 3591775 ACCGCGATGAAAAAA GCGGGC-GTGCCGACCGT ACC AGGATCTG-ACGGCCCGC TGGGCGACGATATGA TERM 4665 3591899 - 3591876 - g 73 -9.4 -3.78775 | opp_overlap 3591896 3591897 CCGGTGATCATCAAA GCGTCCGGCG GCGG CGGCGGCCGC GGTATGCGCGTGGTT accC 3591399 - 3592748 + | acetyl-CoA carboxylase, biotin carboxylase TERM 4666 3592768 - 3592784 + F 100 -10.8 -5.72622 | opp_overlap 3592768 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG TERM 4667 3592784 - 3592768 - f 87 -10.8 -4.19506 | opp_overlap 3592768 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG SeD_A3741 3592857 - 3593099 + | hypothetical protein TERM 4668 3593168 - 3593180 + G 76 -3.3 -5.0133 | overlap 3593162 ACGCTATGCGCAAGC GTACC GCC GGCAC TTTTTTAAACGAATA TERM 4669 3593912 - 3593932 + G 73 -6.1 -4.4261 | ACCGGGGCATTATTA TCGGTACGA TTG TCGTGGCGA TTTTAATGTTCGGGA panF 3593089 - 3594540 + | sodium/pantothenate symporter TERM 4670 3594614 - 3594644 + G 77 -11.2 -3.57144 | opp_overlap 3594624, overlap 3594619 AGAGCTGAGTGATGC GCTGATGGAAGCGG GCG CCGTTTCCATTACC TTTCAGGATACGCAC TERM 4671 3594619 - 3594639 + G 78 -11.9 -3.28001 | opp_overlap 3594624, overlap 3594614 TGAGTGATGCGCTGA TGGAAGCGG GCG CCGTTTCCA TTACCTTTCAGGATA prmA 3594552 - 3595433 + | ribosomal protein L11 methyltransferase TERM 4672 3595443 - 3595462 + T 91 -11.4 -4.36914 | AAATAATTCTTGTCA GCGTGGTC GCCC GGCCACGC TTTTCTCCACACAAC SeD_A3744 3595662 - 3595519 - | hypothetical protein TERM 4673 3595737 - 3595724 - H 84 -8.1 -4.70583 | TTCATGAACACAAAA GCGCA TCTG TGCGC CCCCTTCCGACTGGC TERM 4674 3595779 - 3595765 - H 80 -5.6 -4.91712 | GGCAATGGAGAAAAA TCACGC GCA GCGGGA AGTGATCTTGTCCTG TERM 4675 3595857 - 3595844 - H 86 -4.5 -5.626 | opp_overlap 3595820 3595844, overlap 3595831 TAGCTTATAAAAAAA GCAGA TTAT TCCGC TTATCTTGTTTCTGG TERM 4676 3596059 - 3596045 - H 76 -4.2 -5.00884 | overlap 3596046 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG TERM 4677 3596964 - 3596939 - g 70 -9.8 -3.34894 | gap 1, overlap 3596937 AATCGCGCGTAAACA CGT-CTCCTGG TATCT CCAGGAGCACG CTCCAGACGACCAGT dusB 3596094 - 3597059 + | tRNA-dihydrouridine synthase B fis 3597085 - 3597381 + | DNA-binding protein Fis TERM 4678 3597411 - 3597436 + F 100 -8.2 -5.252 | opp_overlap 3597411 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATC TERM 4679 3597436 - 3597411 - f 74 -6 -4.56597 | opp_overlap 3597411 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATC TERM 4680 3597635 - 3597645 + G 75 -6.8 -4.40358 | ATGGTGGAGTCCTGG GACG AAG CGTC TTTTCTGGCCTGGCT SeD_A3747 3597467 - 3598351 + | DNA methylase SeD_A3748 3598434 - 3598598 + | putative periplasmic protein TERM 4681 3600195 - 3600228 + G 84 -12.5 -3.43492 | GGCGTACTGAATCCT GACCAGTTTTTACCG CTGG CGGAAAAAACGGGTC TTATCGTCACTATCG SeD_A3749 3598749 - 3600848 + | ggdef domain/eal domain protein SeD_A3750 3601513 - 3600851 - | transcriptional repressor SeD_A3751 3601586 - 3601744 + | hypothetical protein TERM 4682 3602173 - 3602163 - f 74 -5.4 -4.64861 | CGTGCTTAAAAGAAA CTTC ACC GAAG GTAGCGATGTAGAGG TERM 4683 3602398 - 3602411 + F 70 -9.5 -3.02043 | GATGCCGCCGTTGTG GCGGC AAAA GCCGC TGTTGAAAGCGCATT TERM 4684 3604031 - 3604061 + G 70 -6.8 -4.1021 | overlap 3604021 3604034 AAACTGGCGGAGCTG CAGCCTTTCTTCCC CCA GGGAATGAAGGTGG TTTATCCTTATGACA SeD_A3754 3603092 - 3606205 + | AcrB protein TERM 4685 3606233 - 3606218 - Tf 74 -10.4 -3.25918 | opp_overlap 3606218, overlap 3606216 3606214 TAACCGGTAAACAGA GGCGTC TTCG GACGCC TTTTTAAACGGTACG TERM 4686 3606218 - 3606233 + TF 93 -10.4 -4.58395 | opp_overlap 3606218 3606216 3606214 TAACCGGTAAACAGA GGCGTC TTCG GACGCC TTTTTAAACGGTACG SeD_A3756 3606467 - 3606303 - | hypothetical protein SeD_A3755 3606443 - 3606664 + | putative lipoprotein TERM 4687 3606695 - 3606669 - TR 80 -12.2 -3.05769 | opp_overlap 3606674, overlap 3606662 TTTCTAAATGATACA TGCAGGCGCGGC AAT GCCGCGCTTTCA GTAATAATATAAAGG TERM 4688 3606674 - 3606690 + Tr 100 -15.1 -3.6959 | opp_overlap 3606669 3606662 AAATGATACATGCAG GCGCGGC AAT GCCGCGC TTTCAGTAATAATAT TERM 4689 3607022 - 3607008 - TR 71 -3.5 -4.88405 | AACTGGCAAATAAAA TAGCC TAATG GGCCA GATTTTTAGTCCTCA TERM 4690 3607235 - 3607269 + Tr 90 -10.1 -4.55209 | gap 1, opp_overlap 3607235 3607242, overlap 3607242 CATAGAGAGATAAAT GCAAAAAGGCCCAGTC TTTC GATTGGGCCC-TTTGC TTTATTTGATGTCTG TERM 4691 3607269 - 3607235 - TR 70 -10.1 -3.10967 | gap 1, opp_overlap 3607235 3607242, overlap 3607242 CATAGAGAGATAAAT GCAAAAAGGCCCAGTC TTTC GATTGGGCC-CTTTGC TTTATTTGATGTCTG TERM 4692 3607242 - 3607263 + Tr 81 -12.3 -3.15242 | opp_overlap 3607235 3607242, overlap 3607235 AGATAAATGCAAAAA GGCCCAGTC TTTC GATTGGGCC CTTTGCTTTATTTGA TERM 4693 3607263 - 3607242 - TR 100 -10.1 -4.85433 | opp_overlap 3607242 3607235, overlap 3607235 AGATAAATGCAAAAA GGCCCAGTC TTTC GATTGGGCC CTTTGCTTTATTTGA TERM 4694 3607345 - 3607359 + Tr 71 -7.8 -3.99324 | opp_overlap 3607345 TGCGCAACGTTCAAA TCCGCT CCC GGCGGA TTTGTCCTCCTCAGG TERM 4695 3607445 - 3607396 - TR 100 -23.3 -4.09117 | opp_overlap 3607400 3607405 3607410, overlap 3607405 3607410 CTCACCGACAAACAA CAGATAAAACAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGTTTTATTTG ATGTCTGGCAGTTCC TERM 4696 3607400 - 3607441 + Tr 100 -20.5 -3.88498 | opp_overlap 3607396 3607405 3607410, overlap 3607405 3607410 CCGACAAACAACAGA TAAAACAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGTTTTA TTTGATGTCTGGCAG TERM 4697 3607405 - 3607436 + Tr 100 -16 -4.98061 | opp_overlap 3607396 3607405 3607410, overlap 3607400 3607410 AAACAACAGATAAAA CAAAAGGCCCAGTC TTTC GACTGAGCCTTTTG TTTTATTTGATGTCT TERM 4698 3607436 - 3607405 - TR 100 -18.2 -4.74989 | opp_overlap 3607405 3607400 3607410, overlap 3607396 3607410 AAACAACAGATAAAA CAAAAGGCCCAGTC TTTC GACTGAGCCTTTTG TTTTATTTGATGTCT TERM 4699 3607410 - 3607431 + Tr 100 -10.1 -5.34857 | opp_overlap 3607405 3607396 3607410, overlap 3607405 3607400 ACAGATAAAACAAAA GGCCCAGTC TTTC GACTGAGCC TTTTGTTTTATTTGA TERM 4700 3607431 - 3607410 - TR 100 -12.3 -5.24647 | opp_overlap 3607410 3607405 3607400, overlap 3607405 3607396 ACAGATAAAACAAAA GGCCCAGTC TTTC GACTGAGCC TTTTGTTTTATTTGA TERM 4701 3610417 - 3610429 + Tr 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4702 3610971 - 3610995 + Tr 71 -8 -3.93061 | gap 1, opp_overlap 3610969 3610977, overlap 3610973 3610974 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 4703 3611070 - 3611035 - TR 77 -9.2 -4.00532 | opp_overlap 3611046 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA CTGATGGCAACGCCT TERM 4704 3612987 - 3612999 + Tr 71 -7.7 -4.00532 | overlap 3612968 CACCGTTGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4705 3613019 - 3613033 + Tr 76 -4.2 -5.0916 | opp_overlap 3613019, overlap 3613008 3613020 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTCTCTTCAACC TERM 4706 3613763 - 3613725 - TR 73 -8 -4.08767 | GGCAGTCCGGTAAAA CAGATCCGCCCCCTGAGC GAT GCTGAGAGATCGGGCCTG CAGTACTCCGCCAAT SeD_A3767 3614068 - 3613811 - | putative periplasmic protein aroE 3614883 - 3614065 - | shikimate 5-dehydrogenase SeD_A3769 3615460 - 3614888 - | Sua5/YciO/YrdC/YwlC family protein SeD_A3770 3616007 - 3615465 - | topoisomerase DNA-binding C4 zinc finger domain protein TERM 4707 3615515 - 3615529 + g 76 -3.4 -5.10933 | opp_overlap 3615510, overlap 3615516 TGGCGCAAAAGCGCT TCACGC CCT GCGCGG TTTTCTTTTCGATGA TERM 4708 3615946 - 3615972 + g 71 -4.2 -4.56597 | overlap 3615949 3615961 GAACGAATTACCAGT TCGGCCCCGCAC TGC GGGCAGGGCTCA TTTTTACGCACCGAA smg 3616507 - 3616034 - | protein Smg SeD_A3772 3617603 - 3616479 - | DNA protecting protein DprA def 3617735 - 3618244 + | peptide deformylase TERM 4709 3618306 - 3618328 + G 95 -14.9 -3.23452 | overlap 3618301 GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTAACTTCTGGACAT TERM 4710 3618491 - 3618481 - g 74 -6.8 -4.25104 | opp_overlap 3618481 3618484, overlap 3618482 TCGTCCTCAGGAAAA CCAG CAA CTGG TTGCTGACTTACATG fmt 3618260 - 3619207 + | methionyl-tRNA formyltransferase TERM 4711 3619224 - 3619242 + F 100 -10.2 -5.54907 | opp_overlap 3619225, overlap 3619225 GGTCACGTCTTCATA AGCCCGGT GTT ACCGGGCA TTTTTATTTTATACA TERM 4712 3619241 - 3619225 - f 86 -13.7 -3.29511 | opp_overlap 3619224 3619225 GTCACGTCTTCATAA GCCCGGT GTT ACCGGGC ATTTTTATTTTATAC TERM 4713 3619225 - 3619241 + F 100 -13.7 -3.91317 | opp_overlap 3619225, overlap 3619224 GTCACGTCTTCATAA GCCCGGT GTT ACCGGGC ATTTTTATTTTATAC TERM 4714 3619959 - 3619976 + G 80 -5.5 -4.88736 | CTGTCCAGGATGCCT CTGCGCA GGGA TGTGCGG TTTTTCTCGCTCCTC sun 3619259 - 3620548 + | ribosomal RNA small subunit methyltransferase B SeD_A3776 3620570 - 3621946 + | Trk system potassium uptake protein TrkA TERM 4715 3621953 - 3621971 + F 100 -11.7 -4.90917 | opp_overlap 3621952 TTCCTCTAATTTAAG GGGCGCT CATTC AGCGCCC TTTTTAATTCCCTTT TERM 4716 3622440 - 3622406 - g 74 -2.1 -5.09426 | gap 1, opp_overlap 3622412 3622417 3622434, overlap 3622412 3622414 CTCAACCGTAAAAAA GCAGAAGA-GCCGGCA GCTC CGCCAGCGCCTTCTAA AGAGGAAGTGTTATT mscL 3622088 - 3622501 + | large conductance mechanosensitive channel protein TERM 4717 3622557 - 3622505 - T 93 -13.6 -3.61894 | opp_overlap 3622506 3622519, overlap 3622508 3622511 AACCGTTCTTAATAA GCAGAAGGCCAGTGGTAAAAAAGT TATTT ACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG TERM 4718 3622506 - 3622557 + T 73 -10.3 -3.09933 | gap 1, opp_overlap 3622505 3622508 3622511, overlap 3622519 ACCGTTCTTAATAAG CAG-AAGGCCAGTGGTAAAAAAGT TATTT ACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG TERM 4719 3622554 - 3622508 - T 100 -19.7 -2.93073 | opp_overlap 3622506 3622519, overlap 3622505 3622511 CGTTCTTAATAAGCA GAAGGCCAGTGGTAAAAAAGT TATTT ACTTTCTTGCCACTGGCCTCC CAGTTCCCTCGATTA TERM 4720 3622551 - 3622511 - T 100 -17.8 -3.61089 | opp_overlap 3622506 3622519, overlap 3622508 3622505 TCTTAATAAGCAGAA GGCCAGTGGTAAAAAAGT TATTT ACTTTCTTGCCACTGGCC TCCCAGTTCCCTCGA zntR 3623189 - 3622764 - | Zn(II)-responsive transcriptional regulator SeD_A3779 3623568 - 3623200 - | hypothetical protein TERM 4721 3623632 - 3623665 + r 79 -11.9 -3.16921 | opp_overlap 3623634 3623642, overlap 3623642 TGGGGTTCAGGAGGA TATAAAAAAACCCGC CGAA GCGGGTTTTTTTACG TTACTACAGATTACT TERM 4722 3623663 - 3623634 - R 100 -16.7 -2.82516 | opp_overlap 3623632 3623642, overlap 3623642 GGGTTCAGGAGGATA TAAAAAAACCCGC CGAA GCGGGTTTTTTTA CGTTACTACAGATTA TERM 4723 3623642 - 3623655 + r 100 -9.5 -5.54192 | opp_overlap 3623634 3623642, overlap 3623632 GAGGATATAAAAAAA CCCGC CGAA GCGGG TTTTTTTACGTTACT TERM 4724 3623655 - 3623642 - R 100 -9.5 -5.74122 | opp_overlap 3623642 3623632, overlap 3623634 GAGGATATAAAAAAA CCCGC CGAA GCGGG TTTTTTTACGTTACT rplQ 3624059 - 3623676 - | ribosomal protein L17 rpoA 3625089 - 3624100 - | DNA-directed RNA polymerase, alpha subunit TERM 4725 3624183 - 3624195 + g 76 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC GGTAA GAGA TTTTTTACCCAGGTT TERM 4726 3625130 - 3625112 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3625735 - 3625115 - | ribosomal protein S4 TERM 4727 3625225 - 3625235 + g 70 -6.8 -4.12188 | overlap 3625222 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 4728 3625762 - 3625780 + r 76 -4.4 -5.00616 | opp_overlap 3625762 3625766 AACTAACCTGGAAAA CGAAGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3626158 - 3625769 - | ribosomal protein S11 rpsM 3626531 - 3626175 - | ribosomal protein S13p TERM 4729 3626356 - 3626374 + g 85 -8.8 -4.44667 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTTCTTCAGACA TERM 4730 3626648 - 3626619 - R 100 -12.3 -4.6645 | gap 1 TACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA secY 3628157 - 3626826 - | preprotein translocase, SecY subunit TERM 4731 3627724 - 3627693 - G 80 -10.2 -3.81755 | overlap 3627699 AGCGGTGAAATAGAA TGCAAAGCCTGG ATTCATCA CCAGGCCCTGCA TACCAGGCATATTCG rplO 3628599 - 3628165 - | ribosomal protein L15 TERM 4732 3628545 - 3628558 + g 73 -5.2 -4.59853 | opp_overlap 3628538, overlap 3628538 CGATACCACGCCCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3628782 - 3628603 - | ribosomal protein L30 rpsE 3629289 - 3628786 - | ribosomal protein S5 rplR 3629657 - 3629304 - | ribosomal protein L18 rplF 3630200 - 3629667 - | ribosomal protein L6 rpsH 3630605 - 3630213 - | ribosomal protein S8 rpsN 3630944 - 3630639 - | ribosomal protein S14p rplE 3631498 - 3630959 - | ribosomal protein L5 TERM 4733 3631336 - 3631354 + g 71 -6 -4.30987 | TTGCTGTCAGGTCTG CTGCTG CGTTATC CAGCAG TTTCTTGTCAGCGAT rplX 3631827 - 3631513 - | ribosomal protein L24 rplN 3632209 - 3631838 - | ribosomal protein L14 TERM 4734 3632281 - 3632269 - R 81 -3.3 -5.40474 | AGGTCGTTAAAAAAA CCCCA TAT CGAGG GCGCGGCATTATAAC TERM 4735 3632350 - 3632325 - R 100 -12.7 -5.252 | opp_overlap 3632325 3632329 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGCG TERM 4736 3632325 - 3632350 + r 77 -10.5 -3.34895 | opp_overlap 3632325, overlap 3632329 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGCG TERM 4737 3632329 - 3632346 + r 74 -6.9 -4.3255 | opp_overlap 3632325, overlap 3632325 GGTAGAAAAAATAAA CGGCCCA TCGC TGAGCCG TTTATTCGTTGAGAA rpsQ 3632627 - 3632373 - | ribosomal protein S17 rpmC 3632818 - 3632627 - | ribosomal protein L29 rplP 3633228 - 3632818 - | ribosomal protein L16 rpsC 3633942 - 3633241 - | ribosomal protein S3 TERM 4738 3633270 - 3633285 + g 70 -3.2 -4.70626 | overlap 3633271 3633282 TACGCTGCTGCTTTT TCGGTT GAGC AGCCGG TTTTTCCGGTTGTTC rplV 3634292 - 3633960 - | ribosomal protein L22 rpsS 3634585 - 3634307 - | ribosomal protein S19 rplB 3635423 - 3634602 - | ribosomal protein L2 TERM 4739 3635459 - 3635479 + r 75 -9.7 -3.57462 | opp_overlap 3635462, overlap 3635462 CTCAGCGCCGCCGAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3635743 - 3635441 - | ribosomal protein L23 rplD 3636345 - 3635740 - | ribosomal protein L4 TERM 4740 3636313 - 3636325 + g 73 -10.5 -3.42663 | opp_overlap 3636308, overlap 3636312 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3636985 - 3636356 - | ribosomal protein L3 TERM 4741 3636947 - 3636961 + g 82 -5.6 -5.02074 | opp_overlap 3636928 3636946, overlap 3636949 ATCTTCAGTGAAGAT GCGGGT CAT ACCCAC TTTTTTACCGACTAA rpsJ 3637329 - 3637018 - | ribosomal protein S10 TERM 4742 3637782 - 3637801 + G 70 -9.2 -3.72588 | TATACGACGCGCGTA CCGGTCTG TTGC CTGACCGG TTTACCTGTCCATTA SeD_A3809 3637709 - 3638176 + | type III leader peptidase bfr 3638649 - 3638173 - | bacterioferritin TERM 4743 3638723 - 3638713 - R 89 -5.4 -5.78622 | GGATGTCAAAAAAAA GAGT GTG ACTC AGGCGATCTCTTTAA bfd 3638916 - 3638722 - | bacterioferritin-associated ferredoxin TERM 4744 3639056 - 3639071 + r 79 -11.8 -3.14878 | opp_overlap 3639056, overlap 3639054 AGCAGGCAACAAAAA GGGCGC CGAA GCGCCC TCTTCAATTCAAAAC TERM 4745 3639071 - 3639056 - R 100 -11.8 -5.11063 | opp_overlap 3639054 3639056 AGCAGGCAACAAAAA GGGCGC CGAA GCGCCC TCTTCAATTCAAAAC tuf2 3640285 - 3639101 - | translation elongation factor Tu TERM 4746 3640330 - 3640305 - R 82 -13.3 -2.78935 | opp_overlap 3640303 ATATTCCTTACTATA GCGCTCTCCCC TTCA GGAGAGAGCAC GGGATTTTGGTTTTT fusA 3642471 - 3640357 - | translation elongation factor G TERM 4747 3642542 - 3642519 - R 83 -8.9 -4.21275 | gap 1 TTAAGTTATCCAAAA CGGGCGACTT ACCTG AAG-CGCCCG CCTGGTGACTATGAC rpsG 3643038 - 3642568 - | ribosomal protein S7 rpsL 3643508 - 3643134 - | ribosomal protein S12 TERM 4748 3643578 - 3643556 - R 93 -10.6 -4.7268 | AAACACGTAATAAAA CGCCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG dsrH 3643921 - 3643634 - | sulfur relay protein TusB/DsrH tusC 3644285 - 3643929 - | sulfur relay protein TusC/DsrF TERM 4749 3644114 - 3644129 + g 75 -4 -4.84359 | gap 1 CAATATAGTCACGCG CCAGCAC AGC GT-CTGG TTTTTGTCCCGGTAA TERM 4750 3644205 - 3644175 - G 100 -9.8 -5.24129 | gap 1, opp_overlap 3644176 GTCGCTGATAAAAAA GACGCCCAGCGCT TCCGTT AGCGCT-GACGTC GCCAGCAGCGCATCC tusD 3644671 - 3644285 - | sulfurtransferase TusD SeD_A3820 3645393 - 3644671 - | hypothetical protein TERM 4751 3645188 - 3645219 + g 70 -6.7 -4.21194 | gap 1 ATTTTACGGCCCGTA TGTTC-GCCATTGG CAATA CGAATGGCTGAACA TTTTAGATCCTGCAA TERM 4752 3645418 - 3645405 - R 78 -6.7 -4.59226 | opp_overlap 3645415 3645416 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTATGTTT TERM 4753 3645658 - 3645637 - R 100 -13 -5.7946 | opp_overlap 3645634 GCCTGAATAAAAAAA CCGCCGCT ATTACA AGCGGCGG CTCTCAGTTTTTATT SeD_A3821 3646487 - 3645669 - | fkbp-type peptidyl-prolyl cis-trans isomerase fkpa TERM 4754 3645795 - 3645805 + g 77 -8.2 -4.13767 | GTTCGCCGGGATACC CGGG ACG CCCG TTTTACCGTAGGCCA SeD_A3822 3646707 - 3646925 + | hypothetical protein TERM 4755 3646938 - 3646952 + T 100 -8.5 -5.60993 | opp_overlap 3646938 TGAGACGAAAAAAAA GCGGG GTTAA CCCGC TTTTTTTGTGCCCGA TERM 4756 3646952 - 3646938 - T 100 -8.5 -5.90981 | opp_overlap 3646938 TGAGACGAAAAAAAA GCGGG GTTAA CCCGC TTTTTTTGTGCCCGA TERM 4757 3647036 - 3647067 + T 79 -10.8 -3.54424 | opp_overlap 3647035 GCAAGCTTGAAAATT CCCCGGGAGCATAG ATAA CTATGTGACCGGGG TTTGAAAGCGTAGCC slyD 3647704 - 3647114 - | FKBP-type peptidyl-prolyl cis-trans isomerase SlyD TERM 4758 3647678 - 3647689 + g 73 -5.8 -4.39989 | overlap 3647662 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT SeD_A3824 3647999 - 3647799 - | hypothetical protein kefB 3649814 - 3648009 - | glutathione-regulated potassium-efflux system protein KefB TERM 4759 3648597 - 3648586 - G 77 -7.2 -4.2717 | ATCACCTGACCAAAA CGGC CAAA GCCG ACGACAATTACCTGG kefG 3650365 - 3649814 - | glutathione-regulated potassium-efflux system ancillary protein kefG TERM 4760 3652158 - 3652142 - g 80 -5.1 -4.91109 | overlap 3652143 GGTTCACGACAAAAA GGTCGAA CCG TTCGACG GAGACCTGGAAGATT SeD_A3827 3650631 - 3652538 + | ABC transporter, ATP-binding protein SeD_A3828 3652701 - 3652922 + | putative ATPase component of ABC transporter with duplicated ATPase domain protein TERM 4761 3652925 - 3652945 + F 78 -6.1 -4.72007 | overlap 3652928 CTGCGTTATGTGATT TAGCGGCAA AGG TTGCCGTGA TTTATTTTCGTCAGC TERM 4762 3652928 - 3652942 + F 71 -10 -3.27205 | overlap 3652925 CGTTATGTGATTTAG CGGCAA AGG TTGCCG TGATTTATTTTCGTC TERM 4763 3653081 - 3653092 + F 80 -5.8 -4.95896 | AACAAGTAAATGCCG CCAG CTTG CTGG TTTTTCTCGCTTTCT SeD_A3830 3653541 - 3654500 + | alpha/beta hydrolase fold SeD_A3831 3654497 - 3654715 + | hypothetical protein SeD_A3832 3654766 - 3655635 + | phosphoribulokinase/uridine kinase family protein SeD_A3833 3656135 - 3655731 - | OsmC family protein TERM 4764 3656208 - 3656191 - H 73 -4.1 -4.84311 | GCGCATACAACAAAA GTCGC AATGGAAG GCGAC CTGGGTCATGCTGAA crp 3656443 - 3657075 + | catabolite gene activator TERM 4765 3657087 - 3657108 + F 95 -8 -5.30616 | opp_overlap 3657087, overlap 3657079 TTAATTCCGTCAGAA TGGCGCGT TTTATC ATGCGCCA TTTTTGTTTGCATCG TERM 4766 3657803 - 3657815 + G 70 -6.9 -4.07687 | ATAATGATTACAAGC GCCTG TTA CGGGC TTTTCAGGAAGCGAT TERM 4767 3657912 - 3657970 + G 88 -11.6 -4.12254 | opp_overlap 3657912 3657935, overlap 3657913 3657953 CAGCCATGCGGAAGA GGTGATTCGCTGGAATGCGCAAACGGTC GCC GCCCGTCTGCGCGTGCTGGCGGATGACA TTCTTTATCATCGTC TERM 4768 3657913 - 3657969 + G 91 -15.1 -3.0663 | opp_overlap 3657912 3657935, overlap 3657912 3657953 AGCCATGCGGAAGAG GTGATTCGCTGGAATGCGCAAACGGTC GCC GCCCGTCTGCGCGTGCTGGCGGATGAC ATTCTTTATCATCGT TERM 4769 3658044 - 3658012 - g 78 -7 -4.65895 | overlap 3658014 TTCTCCATGGAAAAA CAGATTGGCGCTCT GGAGA AAATCGCCAATCAG CATCCTGAAAATCCG TERM 4770 3658042 - 3658014 - g 74 -8.2 -3.94812 | overlap 3658012 CTCCATGGAAAAACA GATTGGCGCTCT GGAGA AAATCGCCAATC AGCATCCTGAAAATC TERM 4771 3658226 - 3658207 - g 71 -11.4 -2.90615 | overlap 3658204 3658221 ATGTCTCTTAAATCA CCGGCGCT ACGC AACGCCGG ACGCATCAGCGTGAT SeD_A3835 3657124 - 3659211 + | integral membrane protein, YccS/YhfK family TERM 4772 3659257 - 3659207 - T 74 -3.8 -4.9792 | overlap 3659208 3659212 TACGGGATACAAAAA GTTAAGACCGACTGCCGGATGCGC TAC GCTTATCCGGCAATCTGCCATCAG GCAACCACCTTCCCT TERM 4773 3659252 - 3659212 - T 88 -12.5 -3.50684 | overlap 3659208 3659207 GATACAAAAAGTTAA GACCGACTGCCGGATGCGC TAC GCTTATCCGGCAATCTGCC ATCAGGCAACCACCT SeD_A3836 3660471 - 3659254 - | acetylornithine/succinyldiaminopimelate aminotransferase pabA 3661120 - 3660557 - | aminodeoxychorismate synthase, component II TERM 4774 3660885 - 3660858 - G 72 -12 -2.73243 | overlap 3660857 ACCGACGCGCCAAAG GCCTGCGCCATC GCCT GATGACCCAGGC AAACGCCCAGCATCG TERM 4775 3660933 - 3660918 - G 71 -10.4 -3.29263 | overlap 3660906 ATACGTCCGGCATAA TGGCGG ATGA CCGCCA GTGAAATGCCAGCGT fic 3661754 - 3661152 - | cell filamentation protein Fic TERM 4776 3661619 - 3661639 + g 73 -8.9 -3.8377 | GCCCCAGTTCAATCG TGGCGGCGC GGA GCGCGGTCA TTTCGTATGCCGCTT SeD_A3839 3661911 - 3661744 - | hypothetical protein TERM 4777 3662009 - 3661989 - R 100 -15.4 -4.46155 | opp_overlap 3661997 GAGACAGGGAGAAAA CGCGGGCG GCTCG CGCCCGCG CAGGCATGTTTTATG ppiA 3662592 - 3662020 - | peptidyl-prolyl cis-trans isomerase A TERM 4778 3662573 - 3662559 - G 77 -7.8 -4.33907 | opp_overlap 3662572 CAGAAAGAGCGAAAA CAGCTG CGA CAGCCG CCAGAGTCGATTTGA tsgA 3662869 - 3664050 + | major facilitator family transporter TsgA TERM 4779 3664057 - 3664086 + TF 82 -13.5 -2.8805 | opp_overlap 3664055 3664054 ACGCATTGATAATCC TTGCCGGATGGCG ACAT CGCCCTCCGGCAC TCTATCCCCCCTCCT SeD_A3843 3664360 - 3664184 - | hypothetical protein TERM 4780 3665071 - 3665102 + GH 71 -10.8 -2.71011 | gap 1 GCTGGCTACCCAGTG CGGTCTGGCCGTCGC GCA GCG-CGGCGGGATCG TGATTAACGACACCT TERM 4781 3665623 - 3665609 - gH 79 -10 -3.74693 | TTCGATGTGACTAAA GGCGAT CTG ATCGCC GCTATCAATAAAGGC TERM 4782 3665686 - 3665675 - gH 74 -7.2 -4.08919 | overlap 3665670 AAAGCGGAAACCAAA GCCG GAAC CGGC TGCGGCGGCTGCATC nirB 3664313 - 3666856 + | nitrite reductase [NAD(P)H], large subunit nirD 3666853 - 3667179 + | nitrite reductase [NAD(P)H], small subunit TERM 4783 3667187 - 3667207 + F 100 -8.9 -5.72118 | overlap 3667188 GCGGTTAATTATTTT TGGGAGGTG CAA CGCCTCCCC TTTTTTGTATTTTTT TERM 4784 3667188 - 3667206 + F 95 -12.4 -3.9778 | overlap 3667187 CGGTTAATTATTTTT GGGAGGTG CAA CGCCTCCC CTTTTTTGTATTTTT TERM 4785 3667315 - 3667282 - f 72 -8.1 -3.794 | overlap 3667283 CGGCAACTGAGCAAA TCCCCAGGAACATAG TTCA CTATGTGACTGGGGT GAGCGAGGGCAGCCA TERM 4786 3667314 - 3667283 - f 77 -11.6 -2.87319 | overlap 3667282 GGCAACTGAGCAAAT CCCCAGGAACATAG TTCA CTATGTGACTGGGG TGAGCGAGGGCAGCC nirC 3667375 - 3668184 + | nitrite transporter NirC cysG 3668196 - 3669569 + | siroheme synthase TERM 4787 3669606 - 3669570 - f 71 -9.6 -3.27298 | opp_overlap 3669580, overlap 3669571 3669576 TTCTCTAATTATTAA TTAAAATAACGCCCTG AATAA CAGGGCTTTATTTTAC AACTACTCGTAATCT TERM 4788 3669605 - 3669571 - f 80 -13.1 -2.56164 | opp_overlap 3669580, overlap 3669570 3669576 TCTCTAATTATTAAT TAAAATAACGCCCTG AATAA CAGGGCTTTATTTTA CAACTACTCGTAATC TERM 4789 3669600 - 3669576 - f 81 -8.6 -4.47217 | opp_overlap 3669580, overlap 3669571 3669570 AATTATTAATTAAAA TAACGCCCTG AATAA CAGGGCTTTA TTTTACAACTACTCG TERM 4790 3669580 - 3669596 + F 89 -9.4 -4.65933 | opp_overlap 3669576 3669571 3669570 ATTAATTAAAATAAC GCCCTG AATAA CAGGGC TTTATTTTACAACTA SeD_A3847 3669907 - 3675678 + | porin, autotransporter TERM 4791 3675728 - 3675707 - f 79 -8.7 -4.34759 | opp_overlap 3675707 TATAACACTAATAAA GGCCGCTTA TTAT TAATCGGCC TTTTTAAATCATATC TERM 4792 3675707 - 3675728 + F 84 -8.7 -4.69664 | opp_overlap 3675707 TATAACACTAATAAA GGCCGCTTA TTAT TAATCGGCC TTTTTAAATCATATC SeD_A3848 3675871 - 3676041 + | putative outer membrane lipoprotein TERM 4793 3676070 - 3676084 + T 100 -11.4 -5.42862 | opp_overlap 3676070 GCAGATACAAAAAAA CCGGGA TTT TCCCGG TTTTTTTACAGGTCT TERM 4794 3676084 - 3676070 - T 100 -11.4 -5.76633 | opp_overlap 3676070 GCAGATACAAAAAAA CCGGGA TTT TCCCGG TTTTTTTACAGGTCT trpS 3677190 - 3676186 - | tryptophanyl-tRNA synthetase gph 3677941 - 3677183 - | phosphoglycolate phosphatase rpe 3678611 - 3677934 - | ribulose-phosphate 3-epimerase TERM 4795 3678616 - 3678628 + r 75 -6.3 -4.43307 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTCTTGCAGG dam 3679465 - 3678629 - | DNA adenine methylase TERM 4796 3678991 - 3679003 + g 74 -3.3 -4.83615 | opp_overlap 3678989 3678992, overlap 3678992 ACTCACAGTAAAAGA ACGCA TTC TGCGC TTTTTCTGCAAAGTG TERM 4797 3679002 - 3678992 - G 74 -6.8 -4.29302 | opp_overlap 3678992 3678991, overlap 3678989 CTCACAGTAAAAGAA CGCA TTC TGCG CTTTTTCTGCAAAGT TERM 4798 3679349 - 3679328 - G 83 -7.3 -4.60073 | overlap 3679329 3679343 GATATAACGAGAAAA GTCGGTGTT AAGA AACACCGAT CCGGCACCCACAAAA TERM 4799 3679348 - 3679329 - G 73 -10.8 -3.34959 | overlap 3679328 3679343 ATATAACGAGAAAAG TCGGTGTT AAGA AACACCGA TCCGGCACCCACAAA SeD_A3853 3680923 - 3679646 - | protein DamX TERM 4800 3680107 - 3680137 + g 71 -6.1 -4.25681 | gap 1 CCGGTTTCTTCGGTT CCGCAG-TCGTGGT TTTC GCCGTGGTCTGCGG TTTCTTAGGTTCAAT TERM 4801 3680646 - 3680662 + g 74 -2.2 -5.09426 | gap 1, overlap 3680648 3680649 ATGTATTGACGAGAG GCTGGCT TATG GGCC-GC TTTTTTACGCTTACG aroB 3682109 - 3681021 - | 3-dehydroquinate synthase TERM 4802 3681813 - 3681836 + g 80 -4.5 -5.08824 | opp_overlap 3681794, overlap 3681815 GCCGCCAAGCGCGAC CAGCGTGGT ATCACG ACCATGCGG TTTTTTCAGTAACGC TERM 4803 3682055 - 3682033 - G 85 -12.8 -3.53712 | overlap 3682029 3682051 AGCGGCAAGAATGAA GCTGGTTCGT TAA ACAAACCAGC CGCGATGGTGATCGG aroK 3682687 - 3682166 - | shikimate kinase TERM 4804 3683319 - 3683305 - R 76 -2 -5.40072 | opp_overlap 3683318, overlap 3683307 TTTTCGCGAAAAAAA TACCGC CCA GCGCCA GCGTCTCGCCGCTTT SeD_A3858 3684653 - 3684306 - | hypothetical protein SeD_A3859 3685170 - 3684697 - | putative inner membrane protein SeD_A3860 3685693 - 3685154 - | PilN family protein TERM 4805 3685226 - 3685244 + g 74 -10.2 -3.53224 | CCCTTGCGCATCCTG CCGCGTGG CGC CCGTGCGG TTTAGCGGAAAACTG TERM 4806 3685593 - 3685567 - G 76 -2.8 -5.00616 | opp_overlap 3685571, overlap 3685571 CCTCCTGCCAAAAAA CCAACCGGGCGA TCG TCGCGAGGCTTG CTATCAGCAGCAGGG TERM 4807 3685779 - 3685735 - H 76 -9.4 -3.66654 | gap 2, overlap 3685739 CAGCGCAATCGCAAA GCGATAACCGTCCGGCGGAACC GGC GGTT--GGCGGACGGTTACGGC GCGCCAGGGGTCGAA TERM 4808 3686010 - 3685975 - H 74 -10.5 -3.21194 | gap 1, overlap 3685976 TATAAACGGCAGCAA GC-GCTGTAACGCGCA GGCAT CGGGCGTTACAGCAGC GATGCGCACATTGAG TERM 4809 3686008 - 3685976 - H 70 -10.6 -2.52234 | overlap 3685975 ATAAACGGCAGCAAG CGCTGTAACGCGCA GGCAT CGGGCGTTACAGCA GCGATGCGCACATTG TERM 4810 3686900 - 3686917 + G 71 -10.5 -3.23393 | overlap 3686898 CGGTAGGTATTTTCC GCGCGGC CAGC GTCGCGC TCTTCTCCGGTCACG TERM 4811 3687982 - 3687954 - g 70 -9.5 -3.32159 | TCAGAGTAAATTTAA CCGCGCGACGCAA GCT TTGCGTCAGGTGG GGTCGAACATCAAAC TERM 4812 3688608 - 3688587 - g 83 -10.1 -4.07568 | overlap 3688600 3688602 GCTGGTCGCGCAAAA CGGCACGCA GGAA TACGCGCCG CATGTGATCAATACG TERM 4813 3688622 - 3688632 + G 74 -8.2 -3.96148 | opp_overlap 3688622 3688620 3688602 3688600 CGCATGTGATCAATA CGCC GCT GGCG TTTCTGATCAAAAGC mrcA 3686593 - 3689145 + | penicillin-binding protein 1A TERM 4814 3689147 - 3689174 + T 86 -11.4 -3.81755 | opp_overlap 3689154, overlap 3689154 ACGAACTGTTCTGAT CAAAAAAGGCGC TCCG GCGCCTTTTTTA TTGTGTTTAGCGGAT TERM 4815 3689154 - 3689167 + T 100 -9.5 -5.66338 | opp_overlap 3689154, overlap 3689147 GTTCTGATCAAAAAA GGCGC TCCG GCGCC TTTTTTATTGTGTTT TERM 4816 3689167 - 3689154 - T 100 -9.5 -5.14563 | opp_overlap 3689154 3689147 GTTCTGATCAAAAAA GGCGC TCCG GCGCC TTTTTTATTGTGTTT SeD_A3863 3689837 - 3689241 - | ADP compounds hydrolase NudE TERM 4817 3689860 - 3689877 + H 90 -9.9 -4.54343 | opp_overlap 3689849 CATACCGCACGGTTT CGGCAAT GCGA ATTGCCG TTTATTTACATTTAT TERM 4818 3690781 - 3690799 + G 72 -2.4 -4.85599 | overlap 3690782 TTGTTATTCTTTTTC TGTCTG ATAACGC CAGACG TTTTTGTACCGTGGA TERM 4819 3691074 - 3691088 + G 81 -3.5 -5.28176 | gap 1, overlap 3691074 3691075 CCTTGATCGCCATGT C-GCCC GCCA GGGCCG TTTTTTATCCCTGCA TERM 4820 3691291 - 3691276 - g 74 -7.6 -4.21936 | GCGACAACGGTAAAA CAGCTT GAAA AAGCTG GCGTGCGGGTGGGCG SeD_A3864 3690127 - 3692259 + | intracellular growth attenuator protein IgaA TERM 4821 3692580 - 3692600 + G 77 -8.1 -4.07885 | TTTGCGCCATGACGA CGGCGCAAG GGC CGCGCGCCG TTTTGCGCGACGATA SeD_A3865 3692324 - 3692992 + | HAD hydrolase, IA family TERM 4822 3693089 - 3693070 - g 74 -7 -4.36914 | CGCGTTTTTATAAAA CCCGCGCG ATGG CCCGCGAG ATGATTGAAGGCGGT TERM 4823 3693310 - 3693295 - g 85 -4.6 -5.16472 | overlap 3693297 AAAAACGCGAAAAAA TGGCGC AGGC GCGCAA GCTTAACGCCCTGAC hslR 3693003 - 3693404 + | heat shock protein 15 hslO 3693423 - 3694307 + | chaperonin HslO TERM 4824 3694345 - 3694392 + T 87 -11.5 -3.86346 | gap 1, opp_overlap 3694389, overlap 3694321 3694390 ATTGCCTGATGGCGC TGCGCTTATCTGGCCTACAG CATCCCGCT CCGTAGGCCGGATAAG-GCA TTTATGCCGCCATCC SeD_A3868 3696127 - 3694418 - | inner membrane protein TERM 4825 3694554 - 3694538 - G 71 -5.7 -4.36914 | opp_overlap 3694540, overlap 3694539 3694540 TTGCGTCTTAGAAAA CCCGTCC GGC AGTCGGG CGAACGCTTTCTGCG TERM 4826 3696354 - 3696342 - H 71 -3.3 -4.77165 | TTTTCCACAACAAAA GTAGG TTT CCTGC CATAATAACCGCCGC TERM 4827 3698044 - 3698031 - g 72 -3.8 -4.74801 | overlap 3698033 3698035 CAATGGCAGGAAAAA GCCA CCGCGC TGGC GAAACTGTTCATTGA pckA 3696507 - 3698126 + | phosphoenolpyruvate carboxykinase TERM 4828 3698196 - 3698179 - T 100 -8.4 -5.4505 | opp_overlap 3698179 GGCGTTAAGAAAAAA GGGAGG ATAATA CCTCCC TTTCTTATGCCTCTT TERM 4829 3698179 - 3698196 + T 79 -8.4 -4.35091 | opp_overlap 3698179 GGCGTTAAGAAAAAA GGGAGG ATAATA CCTCCC TTTCTTATGCCTCTT envZ 3699544 - 3698201 - | osmolarity sensor protein EnvZ ompR 3700269 - 3699550 - | transcriptional regulatory protein OmpR TERM 4830 3700677 - 3700653 - g 90 -5.7 -5.22006 | gap 1 TCAGTATAATAAAAA GCGCCTG-CG TGAGAT CGACAGACGC GTCAGATATCTGACC greB 3700495 - 3700968 + | transcription elongation factor GreB TERM 4831 3702642 - 3702623 - g 77 -8.6 -4.10161 | gap 1 CATGATGGCGCAAAA CATCGTCGC CTG GCG-CGATG AGAACGGTCAGTTCC TERM 4832 3702961 - 3702939 - g 78 -6.8 -4.62904 | opp_overlap 3702938 3702939 3702942, overlap 3702940 AAAGAGCTGGAAAAA CCGGGCCGCG ACC CGCGTCCTGA ATTTAAAACCGCGCA TERM 4833 3703278 - 3703238 - g 84 -13.8 -3.13403 | overlap 3703249 GCGTCTGGACGAACA GCCCGGCGAAACCGCCGC TCGCC GCGGCGGCGGCGCCGATC GCGCTCAGGGCAACC TERM 4834 3703270 - 3703249 - g 89 -13.7 -3.54307 | gap 1, overlap 3703238 AACAGCCCGGCGAAA CCGCCGCTCG CCG CG-GCGGCGG CGCCGATCGCGCTCA SeD_A3873 3701067 - 3703397 + | putative transcriptional accessory protein TERM 4835 3703407 - 3703440 + F 95 -13.1 -4.14739 | opp_overlap 3703408, overlap 3703408 CGCTAATCGGGTAAT ACGCAGGCCGGGTTA CTTC TTATCCGGCCTGCGA TTTTGCAATACGTCC TERM 4836 3703439 - 3703408 - f 88 -14.4 -3.04322 | opp_overlap 3703407 3703408 GCTAATCGGGTAATA CGCAGGCCGGGTTA CTTC TTATCCGGCCTGCG ATTTTGCAATACGTC TERM 4837 3703408 - 3703439 + F 100 -16.6 -3.08522 | opp_overlap 3703408, overlap 3703407 GCTAATCGGGTAATA CGCAGGCCGGGTTA CTTC TTATCCGGCCTGCG ATTTTGCAATACGTC TERM 4838 3703645 - 3703628 - f 73 -4.2 -4.7908 | AAAAAGACAAATAAA TGTTGA GCCATA TCAACA TCGGCGCAAATTATC feoA 3703834 - 3704061 + | ferrous iron transport protein A TERM 4839 3704103 - 3704089 - g 89 -2.8 -5.56112 | opp_overlap 3704089 ATAAAAATGAAAAAA TTAACC ATT GGTTTA ATTGGTAATCCTAAT TERM 4840 3704927 - 3704938 + G 100 -5.8 -5.84381 | TCCTGAACCGCTTCC TCGG CTTA CCGA TTTTTTTGTTCGTGA feoB 3704080 - 3706398 + | ferrous iron transport protein B SeD_A3876 3706411 - 3706647 + | hypothetical protein TERM 4841 3706653 - 3706684 + F 72 -10.2 -2.924 | gap 1, overlap 3706652 CTTGCGTTAGCCTTC GCCGGGTAGCGACGT AAC GCGTC-TTATCCGGC CTTTATCCCGCGTTA TERM 4842 3706702 - 3706731 + G 100 -15.1 -4.21462 | gap 1 TTATCCCGCGTTATG TTGCCCGGTACGCG TCA CGC-TGCCGGGCAA TTTTGCGTCATGCCT SeD_A3877 3706699 - 3706812 + | hypothetical protein TERM 4843 3707310 - 3707340 + G 71 -8.2 -3.8647 | TGAATTTGCCGACCC GGTGATGGCGCGTA AGC TATACGCCACCGCC TTTCCTCTGGTCGAT SeD_A3878 3706882 - 3707808 + | hypothetical protein SeD_A3879 3708614 - 3707844 - | putative pimeloyl-BioC--CoA transferase BioH gntX 3708652 - 3709335 + | protein GntX gntY 3709394 - 3709969 + | protein GntY TERM 4844 3709987 - 3710015 + F 72 -8.8 -3.48276 | gap 1, overlap 3709988 TTTTCCCCGCATCCA TGCCCGAT-GGCG CTTG CGCCTGTCGGGCC TTATCTGCCCCACCG TERM 4845 3709988 - 3710014 + F 78 -12.3 -2.68823 | gap 1, overlap 3709987 TTTCCCCGCATCCAT GCCCGAT-GGCG CTTG CGCCTGTCGGGC CTTATCTGCCCCACC gntT 3710346 - 3711662 + | high-affinity gluconate transporter TERM 4846 3711755 - 3711780 + T 100 -17.7 -3.24423 | opp_overlap 3711759, overlap 3711759 GTGCTCTCACCATCA TAAAGCCGGGG AAAT CCCCGGCTTTA TTACCTCTTCTTCGC TERM 4847 3711776 - 3711759 - T 100 -14.1 -3.99324 | opp_overlap 3711759 3711755 TCTCACCATCATAAA GCCGGGG AAAT CCCCGGC TTTATTACCTCTTCT TERM 4848 3711759 - 3711776 + T 100 -14.1 -4.26003 | opp_overlap 3711759, overlap 3711755 TCTCACCATCATAAA GCCGGGG AAAT CCCCGGC TTTATTACCTCTTCT malQ 3713859 - 3711781 - | 4-alpha-glucanotransferase TERM 4849 3713330 - 3713298 - G 73 -9.1 -3.86015 | overlap 3713326 3713327 GATTCGCCGGATAAA GCGCGTGGATCGG ATTCAGG CCGATAAACGCGC CGCCGCGTGTCGCCA TERM 4850 3713546 - 3713569 + g 88 -9.5 -4.42765 | GTCAGGGTGTGGTAG CCCTCCGGC AACGTA GCCGGAAGG TTTAGTTTTTTACCG SeD_A3884 3716262 - 3713869 - | maltodextrin phosphorylase TERM 4851 3714764 - 3714795 + g 71 -4.4 -4.62872 | gap 1, overlap 3714767 3714768 CGTTTGATGTCGCGA TACTGCTGACGGAAC TTC GCATCGTCAGC-GTA TTTTTCGAGGTTGAT TERM 4852 3715447 - 3715461 + g 80 -4.2 -5.00884 | GCACTGGAAGTATTG CTGCAT CAG ACGCAG TTTTTTGCCCGCCGT TERM 4853 3717274 - 3717284 + G 74 -2.4 -5.06816 | ATCCGGTGATTCACG ACGC GAT GCGC TTTTTCTTACGGCAT TERM 4854 3717647 - 3717661 + G 85 -4.2 -5.26875 | ACTGGATAACGTGGA TGTCAG CAC CCGACA TTTTTTACTTAAAAG TERM 4855 3719106 - 3719093 - g 71 -4.5 -4.56775 | gap 1, opp_overlap 3719093 ATCCGGGCGGAAAAA CGACGC CCA GCG-CG TATTGCTTGATGCCT malT 3716856 - 3719564 + | transcriptional regulator MalT SeD_A3886 3719927 - 3719652 - | hypothetical protein SeD_A3887 3720190 - 3719930 - | DNA-damage-inducible protein J TERM 4856 3720570 - 3720594 + r 95 -13 -3.68351 | overlap 3720553 TTTACGCCGAACGCG GCGAACAGTT CGGTC AACTGTTCGC TTTGGATCATCAGCA TERM 4857 3721032 - 3720984 - R 74 -11 -2.91873 | gap 2, overlap 3720981 3720986 ACCATCGGCAAACCA CAGCGCGGGCAGGACGGTTTGCAG CAC CAGCATACAA-C-TGCCCGCGCTG CCAATCGCGAAACGG rtcB 3722531 - 3721314 - | RtcB protein TERM 4858 3721748 - 3721770 + g 80 -9 -4.21194 | overlap 3721749 TCGATTTTTCCACGC AGCGCTGGAG CGC CGCCAGCGCG TTTTCCATCATCGCC TERM 4859 3721749 - 3721769 + g 81 -12.5 -3.12395 | overlap 3721748 CGATTTTTCCACGCA GCGCTGGAG CGC CGCCAGCGC GTTTTCCATCATCGC TERM 4860 3722431 - 3722418 - G 75 -5.9 -4.65263 | opp_overlap 3722416 3722418 ATGTTTGAAAATAAA CGGCA TTTT CGCCG TATTAATCAGTTGCT SeD_A3891 3724429 - 3722876 - | 60-kDa SS-A/Ro ribonucleoprotein TERM 4861 3723047 - 3723065 + g 74 -4.5 -4.75174 | gap 1, opp_overlap 3723043 ATCGATACACACCAG GCGC-GCC TGCG GGTTGCGC TTTTTCAGTTCGATC TERM 4862 3723212 - 3723236 + g 70 -7 -4.1585 | CGCGGAGCAGTTGGT GCTGCCGCCG CCAAC CGCCGCCAGC TTTTGCGCGTTGTGC TERM 4863 3723806 - 3723822 + g 77 -3.5 -5.01732 | opp_overlap 3723806 ATTGCCTTCACGAAA CGCCAGC AGC GCGCGCG TTTTTTCCGGCAGTT TERM 4864 3724573 - 3724557 - H 89 -6.5 -5.28942 | CAGGTGAAAGAAAAA TGCCTGC ACG GCAGCCA TTAAAAAGCGATAAA SeD_A3892 3724619 - 3726202 + | transcriptional regulatory protein RtcR SeD_A3893 3726957 - 3726199 - | glycerol-3-phosphate regulon repressor TERM 4865 3726711 - 3726723 + g 100 -9.1 -5.16151 | GGGCCGCGACTTTGC GAGCG ATG CGCTC TTTTTCTTCCGTTTG TERM 4866 3727046 - 3727025 - R 74 -5.9 -4.56597 | gap 1 CCCGGCCTGGAAAAA TATCTCGACC ACA GGCCG-GATA CGCCTCACGTTCGTT SeD_A3894 3727881 - 3727051 - | glp regulon protein SeD_A3895 3728283 - 3727957 - | thiosulfate sulfurtransferase GlpE TERM 4867 3728174 - 3728164 - G 71 -8.2 -3.76952 | GTTAGTCAAGTGAAA CGCC TGC GGCG CATGACCCATGGCAT TERM 4868 3728432 - 3728447 + H 82 -7.6 -4.70879 | GTTTCTTTGCTATTA TGTTCG ATAA CGAACA TTTTTGAACTTTAAC TERM 4869 3729519 - 3729507 - g 74 -6.9 -4.3129 | opp_overlap 3729506 3729505 3729507, overlap 3729509 TATTCATGATGAAAA CGGCA AAG CGCCG CTGCTTTCCGTGTTT SeD_A3896 3728482 - 3729990 + | aerobic glycerol-3-phosphate dehydrogenase TERM 4870 3730000 - 3730017 + T 95 -12.7 -4.08767 | opp_overlap 3729996 3729998 3729997 TCGTAATAAAATCCG GGGCGGT TTAT ACCGCCC TTTTCGCCACATACC SeD_A3897 3730582 - 3730037 - | putative inner membrane protein SeD_A3898 3732088 - 3730592 - | putative periplasmic phosphate-binding protein TERM 4871 3732193 - 3732224 + r 93 -7.2 -5.63517 | opp_overlap 3732192 AAACATTCACGATAG CGGCAGACAGAAGT TGAA AGTTCCGGCTGCCG TTTTTTATTTACAGG SeD_A3899 3733355 - 3732246 - | glycerol dehydrogenase TERM 4872 3732884 - 3732867 - G 77 -4.1 -4.98531 | gap 1, overlap 3732868 3732869 CCCGGAAACCAAAAA GCGTACCG GCG CGGCA-GC AATAATACTGCTGTC SeD_A3900 3733693 - 3735027 + | major facilitator superfamily MFS_1 TERM 4873 3735229 - 3735247 + G 81 -13.2 -2.87344 | opp_overlap 3735215 GCGGCGGGCGCGCGG TCCGTCAC CAT GTGACGGA TATCTGCGACGGCTG SeD_A3901 3735024 - 3736739 + | dihydroxy-acid dehydratase TERM 4874 3736745 - 3736766 + F 79 -9.3 -4.11692 | opp_overlap 3736740, overlap 3736747 GCTTAAATAATATCC CTGGCGGGC TACG GCTCGCCTG TTTTAAGGATCAATA TERM 4875 3736747 - 3736764 + F 79 -10.5 -3.65542 | opp_overlap 3736740, overlap 3736745 TTAAATAATATCCCT GGCGGGC TACG GCTCGCC TGTTTTAAGGATCAA SeD_A3902 3736783 - 3737688 + | dihydrodipicolinate synthetase TERM 4876 3737694 - 3737723 + T 100 -8.6 -5.27335 | gap 1, opp_overlap 3737701, overlap 3737701 GGGACTTTAAGCTAT GACGAAAGCGGGC TTCTT GCCCGCTGT-GTC TTTTTATTTCAGCAC TERM 4877 3737701 - 3737717 + T 77 -10.8 -3.40971 | opp_overlap 3737701, overlap 3737694 TAAGCTATGACGAAA GCGGGC TTCTT GCCCGC TGTGTCTTTTTATTT TERM 4878 3737717 - 3737701 - T 83 -10.8 -3.80461 | opp_overlap 3737701 3737694 TAAGCTATGACGAAA GCGGGC TTCTT GCCCGC TGTGTCTTTTTATTT SeD_A3903 3738487 - 3737732 - | putative transcriptional regulator TERM 4879 3738171 - 3738154 - G 77 -7.7 -4.27117 | gap 1, opp_overlap 3738163 CTTTCAGAAGATAAA TGG-GGGC ATC GCCCTCCA GAACGCCAAGATGGC TERM 4880 3738295 - 3738307 + g 70 -2.7 -4.7373 | ACAGGCGTAGCCCCA GATAA TAC TTGTC TTTTTCCTGGCGTAA TERM 4881 3738646 - 3738629 - R 100 -14.1 -5.32882 | opp_overlap 3738629 TACCACGATAAAAAA CGGGGCC GTTT GGCCCCG TTCTCAAGCGTTAAA TERM 4882 3738629 - 3738646 + r 90 -14.1 -3.31322 | opp_overlap 3738629 TACCACGATAAAAAA CGGGGCC GTTT GGCCCCG TTCTCAAGCGTTAAA SeD_A3904 3741112 - 3738665 - | glycogen phosphorylase TERM 4883 3739703 - 3739715 + g 71 -10.5 -3.18681 | opp_overlap 3739673 CGCCAGCCAGCGGCG CGGCG TAA CGCCG TTAGTGACGTTACAA TERM 4884 3740238 - 3740211 - G 100 -15.6 -3.33492 | overlap 3740212 3740214 TTATGCAGTTGATAA TGACGGTGCAGG ATAT CCTGCACCGTCG CCGAGACCAGAAAAT TERM 4885 3740237 - 3740212 - G 100 -19.1 -2.59881 | overlap 3740211 3740214 TATGCAGTTGATAAT GACGGTGCAGG ATAT CCTGCACCGTC GCCGAGACCAGAAAA TERM 4886 3740235 - 3740214 - G 86 -15.9 -2.83822 | overlap 3740212 3740211 TGCAGTTGATAATGA CGGTGCAGG ATAT CCTGCACCG TCGCCGAGACCAGAA TERM 4887 3740271 - 3740253 - G 79 -7.4 -4.50976 | GCCGAGACCAGAAAA TACTCCTG GCG CAGGCGTA GCTCTCGTCCGGAAT glgA 3742565 - 3741132 - | starch synthase TERM 4888 3741273 - 3741253 - G 72 -4 -4.75289 | gap 2, overlap 3741254 3741256 3741257 GACCACAACACAAAA GC-ACGC-CG AAT CGCGCGTAGC AACGACCAGGCATTA glgC 3743860 - 3742565 - | glucose-1-phosphate adenylyltransferase glgX 3745851 - 3743875 - | glycogen debranching enzyme GlgX TERM 4889 3745708 - 3745676 - G 71 -10 -3.48276 | overlap 3745679 3745688 GCGCCTGCCAGATAA CCATGCCAG-ACATCG CCG CGACGTCCTGGCA-GG TCATAGCGACGCTCA TERM 4890 3745706 - 3745679 - G 71 -11.4 -2.88822 | gap 1, overlap 3745676 3745688 CCTGCCAGATAACCA TGCCAG-ACATCG CCG CGACGTCCTGGCA GGTCATAGCGACGCT TERM 4891 3745758 - 3745743 - G 74 -3.2 -4.8622 | overlap 3745744 3745747 CTCGGGAATCAAAAA CGCACA GCTC TACGCG CTCCGCATGAGCGGA TERM 4892 3745793 - 3745779 - G 74 -10 -3.67634 | overlap 3745777 CATGAGCGGAAAAGA GCGTGA AAT TCACGC CATGACCGTCATACG glgB 3748034 - 3745848 - | 1,4-alpha-glucan branching enzyme TERM 4893 3746070 - 3746096 + g 86 -12.3 -3.86346 | AACGGGCGTAAAGTT GCTGGCGACGA TGATC TCGTTGCCGGC TTTATCACGGCGTAC TERM 4894 3748285 - 3748270 - R 100 -6.1 -6.11644 | opp_overlap 3748269 TTACGCAAAAAAAAA GGGTG ACGATG CACCC CTGGTTTAACACAAA TERM 4895 3748318 - 3748331 + r 73 -9.5 -3.30124 | opp_overlap 3748301 CCCCCGCCGGATGGC GGCGC TAAC GCGCC TTATCCGGCCTACAG TERM 4896 3748426 - 3748368 - R 70 -8.8 -3.30243 | gap 1 ACGCAGGCCCGATAA GCGCTGCAATAGCCACTACGCCAACTG GCGCAG CATTCGACGCAGCGGCT-CGGCGGCGC CCCATAACAACTGGT asd 3749558 - 3748383 - | aspartate-semialdehyde dehydrogenase TERM 4897 3749848 - 3749823 - R 93 -6.2 -5.80364 | gap 2 ACCTCAATAAAAAAA CCGGGT-A-GCG ATTA CGCCTTACCCGG CTTACGGTGTCGATA gntU 3751253 - 3749913 - | gluconate transporter GntU TERM 4898 3750596 - 3750580 - G 76 -10.9 -3.66356 | overlap 3750583 AGGCTGAAGCCGAAA GAAGGCA TTT TGCCTTC GCCCAGATGCGGCTC TERM 4899 3750804 - 3750786 - G 95 -8 -5.10461 | overlap 3750787 CCCAGGCAACAAAAA CGCCGCGG CTG CCGCCACG CCCGCAAACAGCGGA TERM 4900 3751193 - 3751162 - G 75 -13 -2.54192 | opp_overlap 3751170, overlap 3751161 GAGACGACCATTAAC GCGACGAAGGCGTG CATA CGCGCCTTCATCAC CAAAAACAGCAGCAG aroK 3751744 - 3751250 - | shikimate kinase gntR 3752983 - 3751922 - | transcriptional regulator GntR TERM 4901 3752409 - 3752376 - G 75 -12.5 -2.64422 | gap 1, opp_overlap 3752382, overlap 3752366 AGATAGGCGATATGA CGATGACCACGCGCGA TAA TCGCG-GCGGTCATCT GACGGGCGGCCTCGA TERM 4902 3753026 - 3752994 - R 70 -4.8 -4.40993 | gap 1, opp_overlap 3753004 GACAAACGATGAAAA GCCGGATGGCAACGC TTTC GCGTCTT-ATCCGGC CTACAAAAGGTTACA SeD_A3913 3753742 - 3753047 - | protein YhhW TERM 4903 3753331 - 3753349 + g 76 -12.4 -3.14211 | opp_overlap 3753345 GTTGCTTGCCCTGCG CGGCGTCG AAG CGACGCTG TTCGTAGCGCGGCGT SeD_A3914 3754903 - 3753866 - | putative oxidoreductase YhhX TERM 4904 3754545 - 3754527 - G 70 -5.3 -4.50241 | gap 1, overlap 3754518 AAACAGGAATCAAAA CGCCG-AT TCTG ATACGGCG TGACGGTCAGTCCTT TERM 4905 3755179 - 3755164 - H 100 -10.4 -5.91981 | AAAACCCAAAAAAAA GCCAGC AAAA GCTGGC CAAAATAATACTGGA SeD_A3916 3755370 - 3755858 + | acetyltransferase, gnat family SeD_A3917 3756055 - 3755939 - | hypothetical protein TERM 4906 3756876 - 3756863 - g 87 -2.4 -5.60993 | TCTCGCACAAAAAAA TGAC ATACCG GTCA TCATCAATCCAGCGC SeD_A3918 3756123 - 3757337 + | ribokinase TERM 4907 3757668 - 3757656 - g 81 -4.1 -5.2853 | CAGCTAAAAATAAAA CCAAA CGC TCTGG AGTCCATTAAAGAGT SeD_A3919 3757353 - 3758114 + | hypothetical protein TERM 4908 3758146 - 3758119 - f 100 -5.6 -5.86976 | opp_overlap 3758123 3758140, overlap 3758122 3758123 CCAGAAAATAAAAAA CAATGGAGTAAC GAAA GTTACTCCTTTT ATAAAATATAAGGAT TERM 4909 3758143 - 3758122 - f 85 -7.3 -4.94109 | opp_overlap 3758123 3758140, overlap 3758119 3758123 GAAAATAAAAAACAA TGGAGTAAC GAAA GTTACTCCT TTTATAAAATATAAG TERM 4910 3758123 - 3758142 + F 93 -10.8 -4.41548 | opp_overlap 3758122 3758119 3758123, overlap 3758140 AAAATAAAAAACAAT GGAGTAAC GAAA GTTACTCC TTTTATAAAATATAA TERM 4911 3758142 - 3758123 - f 79 -10.8 -3.52805 | opp_overlap 3758123 3758140, overlap 3758122 3758119 AAAATAAAAAACAAT GGAGTAAC GAAA GTTACTCC TTTTATAAAATATAA SeD_A3920 3758168 - 3759139 + | putative inner membrane protein SeD_A3921 3759136 - 3760170 + | putative phophotriesterase TERM 4912 3760203 - 3760179 - T 86 -12.1 -3.62591 | overlap 3760181 GGCATAATCTGCAAA TAGCCCGGTGT CTG ACACCGGGCCT GGAATTAAAAATCAG TERM 4913 3760201 - 3760181 - T 100 -16.9 -3.39028 | overlap 3760179 CATAATCTGCAAATA GCCCGGTGT CTG ACACCGGGC CTGGAATTAAAAATC ggt 3761957 - 3760215 - | gamma-glutamyltransferase TERM 4914 3760803 - 3760820 + g 71 -4.7 -4.55287 | overlap 3760805 CTGGTTGCTTTCATA CGGGGCG AGCT TGCCCGG TTTTATCTGGCTGGA SeD_A3923 3762083 - 3762499 + | putative outer membrane protein SeD_A3924 3763236 - 3762496 - | glycerophosphoryl diester phosphodiesterase TERM 4915 3762592 - 3762545 - G 86 -15.1 -2.87564 | gap 3, opp_overlap 3762553, overlap 3762548 3762552 CGATCGGTGCAGATA CAATCCACGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC-T-GATTG ACGGTATACACCAGA TERM 4916 3762590 - 3762548 - G 77 -11.3 -3.58726 | gap 2, opp_overlap 3762553, overlap 3762545 3762552 TCGGTGCAGATACAA TCCACGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC-TGAT TGACGGTATACACCA TERM 4917 3762587 - 3762552 - G 83 -15.4 -2.64877 | gap 1, opp_overlap 3762553, overlap 3762548 3762545 TGCAGATACAATCCA CGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGCT GATTGACGGTATACA TERM 4918 3762553 - 3762586 + g 83 -14.5 -2.72991 | gap 1, opp_overlap 3762552 3762548 3762545 GCAGATACAATCCAC GCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC TGATTGACGGTATAC SeD_A3925 3764303 - 3763233 - | sn-glycerol-3-phosphate import ATP-binding protein UgpC SeD_A3926 3765150 - 3764305 - | sn-glycerol 3-phosphate transport protein TERM 4919 3764609 - 3764593 - G 91 -10.1 -4.57073 | overlap 3764577 GATGTCGCGGAAAAA GCGCATC GGC GACGCGC CGTCAATACGGGCCG ugpA 3766034 - 3765147 - | sn-glycerol-3-phosphate transport system permease protein UgpA TERM 4920 3765890 - 3765862 - G 75 -6.8 -4.41844 | overlap 3765879 AAAAGCGCGACAAAA TTCTCCAGCC CGACAAATT GGCTGGAAAA ACCAAACGGATCGAC TERM 4921 3766113 - 3766077 - R 81 -13.1 -2.71011 | opp_overlap 3766067 3766102 3766102 ATGGCGGTGCAAGCA CCTTATCCGGCCTACAA ACG CTGTAGGCCTGATAAGC GCAGCGCCATCAGGC ugpB 3767455 - 3766139 - | glycerol-3-phosphate-binding periplasmic protein precursor TERM 4922 3766348 - 3766358 + g 72 -2.4 -4.93296 | overlap 3766347 GGCGAGTGGCGATAT CCGC ACC GGGG TTTTTATCGTAATAA TERM 4923 3766411 - 3766425 + g 85 -4.9 -5.16237 | overlap 3766412 AGGCGGCGGTGGTAA TCGGC AGGTA GCCGG TTTTTTGATGCCATT TERM 4924 3767484 - 3767497 + r 72 -5.2 -4.66537 | opp_overlap 3767494, overlap 3767483 TTTTGTGCCGGGATG CGCG ATATCA CGCG TTTTATGTTCGCGGG TERM 4925 3767570 - 3767544 - R 70 -2.4 -5.04175 | overlap 3767547 CGAATGACAGAAAAA TAACTTTTTTAT TAC AAAAAAAAGATA GTAAGGCGACAGAGA SeD_A3929 3768082 - 3767714 - | death on curing protein SeD_A3930 3768300 - 3768079 - | addiction module antitoxin, Axe family TERM 4926 3768354 - 3768367 + r 76 -8.1 -4.14013 | opp_overlap 3768307 3768306 3768354 ACATGTACAAAAAAA GAGCC ATCA GGCTC TTTTGAAAAATTTTA TERM 4927 3768367 - 3768354 - R 100 -8.1 -5.65177 | opp_overlap 3768354, overlap 3768307 3768306 ACATGTACAAAAAAA GAGCC ATCA GGCTC TTTTGAAAAATTTTA SeD_A3931 3769144 - 3768431 - | high-affinity branched-chain amino acid transport ATP-binding proteinlivF livG 3769913 - 3769146 - | high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivG TERM 4928 3769506 - 3769459 - G 72 -12.2 -2.63596 | gap 2, opp_overlap 3769435 CCGTAGGCCAGATTA CTGGCCTG-GCG-ATTGGCATG TTCCAG CAGGCCAATACGCTCAAGCCAG GTCGCCGCGCGGTCC livM 3771187 - 3769910 - | high-affinity branched-chain amino acid ABC transporter, permease protein LivM livH 3772110 - 3771184 - | high-affinity branched-chain amino acid transport system permease protein livH TERM 4929 3772148 - 3772128 - R 75 -9.6 -3.55622 | overlap 3772129 GGTAACCTTTTTAAA CCCGCCCG GCGTG CGGGCGGT GGGATAACTTATCTT TERM 4930 3772147 - 3772129 - R 81 -13.1 -2.73159 | overlap 3772128 GTAACCTTTTTAAAC CCGCCCG GCGTG CGGGCGG TGGGATAACTTATCT livK 3773279 - 3772170 - | high-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein LivK TERM 4931 3772718 - 3772701 - G 79 -2.7 -5.2112 | opp_overlap 3772709, overlap 3772709 AATACCATCAAAAAA GACAATA TTGG CATTGCC CTGCTTCAGGCCATC SeD_A3936 3773701 - 3774084 + | acetyltransferase, gnat family TERM 4932 3774117 - 3774091 - g 89 -8.7 -4.66535 | gap 1 AAGCGCTAAAAGAAA GCCGGAT-GGCG CTGA CGCTTATCCGGC CTACATGCCGGGAGA SeD_A3937 3774062 - 3774196 + | hypothetical protein TERM 4933 3774200 - 3774231 + T 73 -10.8 -3.06796 | opp_overlap 3774200 3774199 GGCAAGTTATGAAAT CCCCGGGAGCTTAC ATAA GTAAGTGACCGGGG TTGAATAACGTAGCC SeD_A3938 3775383 - 3774280 - | leucine-specific-binding protein TERM 4934 3774868 - 3774903 + g 71 -6 -4.3208 | opp_overlap 3774888 3774889 CAGCCCTTCGCCGTA CTGCTGCTTATCGTGG ATAA TCGCGATGCGCTGCGG TTTTACCTTCTCCAG TERM 4935 3775000 - 3775022 + g 70 -9.8 -3.41051 | GCCGCGCGCGGTCAG CTCCGGCG CGGTCGC CGCCGGGG TTATCATCAGGATGC TERM 4936 3775683 - 3775662 - R 100 -10.9 -5.49579 | opp_overlap 3775662 CTACAAAAAACAAAA CCCCCGAAT TCAC ATTCGAGGG TTCATTGGCAATTCG TERM 4937 3775709 - 3775729 + r 76 -5.3 -4.74801 | opp_overlap 3775708, overlap 3775698 ATTCGCGAAGATTAC GCTTCGATC GCA GCGCGAAGC TTTTTCATGGCGTTC rpoH 3776559 - 3775705 - | alternative sigma factor RpoH TERM 4938 3776752 - 3776788 + r 93 -14.5 -3.30903 | opp_overlap 3776745 3776748 AGAGACAACAGGGAC TCTTTCCCTGCGAACGG AAG CCCATTGCAGGGAAAGA TTATACCACGATTTT ftsX 3777860 - 3776805 - | cell division protein FtsX ftsE 3778521 - 3777853 - | cell division ATP-binding protein FtsE TERM 4939 3778066 - 3778092 + g 89 -13.6 -3.65046 | overlap 3778069 CGCTGGCTTATTGAC CACCGCGCGGGC GAT GCCCACGCGCTG TTGTTCGCCTCCGGA TERM 4940 3778069 - 3778089 + g 78 -13.9 -2.64045 | overlap 3778066 TGGCTTATTGACCAC CGCGCGGGC GAT GCCCACGCG CTGTTGTTCGCCTCC SeD_A3942 3779999 - 3778524 - | cell division protein FtsY TERM 4941 3778578 - 3778558 - G 73 -5.3 -4.63486 | overlap 3778559 3778573 AGTGCCTCAATAAAA TCGTCCGCC TTA AACGGACGC AAATCCTCGATACGT TERM 4942 3778954 - 3778928 - G 70 -2.8 -4.72846 | opp_overlap 3778931, overlap 3778929 3778931 GGATAGAGTCAAAAA TCACCGAGGCAG AGT CCGCACCGGTAT GCTGGGCGATAACCG rsmD 3780098 - 3780721 + | RNA methyltransferase, RsmD family SeD_A3944 3780711 - 3780980 + | hypothetical protein SeD_A3945 3781373 - 3781002 - | hypothetical protein TERM 4943 3781267 - 3781283 + g 78 -6.5 -4.58283 | overlap 3781280 TTTTGCTGTAACGGT GCCGC CTCATTA GCGGC TTTTTCCCGCCGTTG TERM 4944 3781585 - 3781599 + G 73 -5.6 -4.57569 | overlap 3781576 3781581 CCTATCGCGGGCCAG CCTGGC AAC GCTGGG TTTTTAAGCCCGTCA TERM 4945 3781720 - 3781760 + G 79 -3.2 -5.19328 | gap 1, overlap 3781713 3781712 3781721 TCGGCGATGCGTTAA CGCTCTTACCGCGT-CAAC GCCT GTTGTACGCCGTCGGGGCA TTTTTCTTATCGCAT SeD_A3946 3781515 - 3782141 + | hypothetical protein TERM 4946 3782156 - 3782175 + TF 80 -12.2 -2.95223 | opp_overlap 3782148 3782149, overlap 3782170 AATAATAGCGCTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTCCGGTTA TERM 4947 3782178 - 3782219 + TF 75 -9.5 -3.48593 | opp_overlap 3782148 3782149, overlap 3782170 3782179 GTCGACTCCAGAGTG TATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGACG TTATGTCGACCCCTG TERM 4948 3782179 - 3782218 + TF 71 -10.8 -2.68942 | opp_overlap 3782148 3782149, overlap 3782170 3782178 TCGACTCCAGAGTGT ATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGAC GTTATGTCGACCCCT SeD_A3947 3782364 - 3782206 - | hypothetical protein TERM 4949 3782828 - 3782846 + GH 71 -9.6 -3.17051 | overlap 3782826 GGCGCGACGGCGGAG GCGGCAAT GGT ATTGCTGC TGTTCCTCATCGGCG TERM 4950 3783111 - 3783075 - gH 79 -9.5 -3.73224 | opp_overlap 3783076 CCAGCTTTGATGAAA GCGCGCT-CACCGGCGA GTCTA TC-CCTGTGGAGCGCGC AACGGGCGACAAAGT cadA 3782222 - 3784420 + | cadmium-translocating P-type ATPase TERM 4951 3784431 - 3784453 + FH 93 -14.8 -3.30007 | overlap 3784429 3784444 3784446 3784447 ACTAATCTTCTCCCG CCCGGCGGCG TCG TGTCGCCGGG TTATCCCGCGGTATT TERM 4952 3784878 - 3784847 - g 77 -3.6 -5.05782 | gap 1, overlap 3784848 ACGCATGTTAAAAAA TCAGCGCGATCCCGC CTC GCTGGA-CGCCATGA ACACGCTGTTAACCA TERM 4953 3785326 - 3785308 - g 70 -8.8 -3.70902 | opp_overlap 3785311, overlap 3785309 3785311 TGGCGCACATTCAAA CGATCGCC GAC GGCGATCT TACCCATGAGATAGA TERM 4954 3785325 - 3785309 - g 72 -12.3 -2.82327 | opp_overlap 3785311, overlap 3785308 3785311 GGCGCACATTCAAAC GATCGCC GAC GGCGATC TTACCCATGAGATAG SeD_A3949 3784620 - 3786263 + | methyl-accepting chemotaxis protein I SeD_A3950 3786622 - 3786287 - | hypothetical protein SeD_A3951 3786702 - 3787367 + | hypothetical protein TERM 4955 3787540 - 3787518 - g 87 -8.3 -4.6391 | AACAATGATACAAAA GCGTCGGCA GAAAG CGCCGCCGC GGAAAGCCAGGCCTC SeD_A3952 3787440 - 3787997 + | DcrB protein TERM 4956 3788015 - 3788042 + T 100 -14.1 -5.40072 | TTTACGATGATGATG CGGCCTCCGGC AGTGCA GACGGAGGCCG TTTTTTTAAGCGCCA SeD_A3953 3789218 - 3788001 - | protein YhhS TERM 4957 3788722 - 3788705 - G 71 -10.5 -3.18945 | overlap 3788703 CCCAGGCATAACACA GCACGCC CAGC GGCGCGC CCATCGCCATTGCGC TERM 4958 3788931 - 3788881 - G 71 -6.1 -4.2704 | gap 2, overlap 3788885 CCCAGTAGCAACAAA CTGATCATCGGCCAGGCGCTGGCGA TAT CCGCCAGCAGGTAGCCGA-G-TCCG CTTAAAAAACAGCCG TERM 4959 3790127 - 3790150 + G 72 -3.8 -4.77438 | TTTAACGGTTTTTAC GAGTGCGT ACTGGTCG GCGCGCTC TTTTTGCTGGTCCAT SeD_A3954 3789350 - 3790399 + | inner membrane protein YhhT SeD_A3955 3790451 - 3791029 + | 4'-phosphopantetheinyl transferase AcpT nikR 3791084 - 3791521 + | nickel-responsive transcriptional regulator NikR SeD_A3957 3792735 - 3791611 - | ABC transporter, ATP-binding protein TERM 4960 3795388 - 3795398 + r 80 -6.8 -4.68994 | CAGCGTGATATTGTT CAGC GCG GCTG TTTTTCCGTAATGCT SeD_A3960 3796535 - 3795468 - | secretion protein HlyD family protein TERM 4961 3795539 - 3795550 + g 74 -7.2 -4.1964 | opp_overlap 3795528 GAACCCAGGCCATTC CCGG CAAA CCGG TTTTGACATATTCCA TERM 4962 3795631 - 3795646 + g 70 -6.8 -4.11394 | overlap 3795632 AGCTTCAGTCGTTCA TCGTGG GTTT CCACGG TTTTGGGCGTGAACT TERM 4963 3796180 - 3796192 + g 70 -9.1 -3.71645 | TGTTTGACGACCGAC TGCGC GGC GCGCA TTTCACTCTGGCGTT SeD_A3961 3796627 - 3796758 + | hypothetical protein SeD_A3962 3798037 - 3796841 - | hypothetical protein TERM 4964 3797330 - 3797320 - G 77 -8.2 -4.17089 | TGGAAATCTGTAAAA CGGC GGG GCCG GACAGCCCACGATGG TERM 4965 3797747 - 3797737 - G 86 -6.8 -5.07053 | opp_overlap 3797736 3797737 AATCATCGCAAAAAA GCTG TCC CAGC GTTTTCTCATACCAG TERM 4966 3798287 - 3798307 + G 75 -4 -4.95167 | gap 1 TACATTTGTTTGCTG GCCTGG-AT TTAC ATACCGGGC TTTTATTATTGCTTG TERM 4967 3798887 - 3798868 - g 74 -4.2 -4.68655 | overlap 3798864 GAACGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC GTTCTGGACGCGTAT SeD_A3963 3798268 - 3799764 + | probable low-affinity inorganic phosphate transporter 2 TERM 4968 3799895 - 3799874 - T 86 -11.5 -3.68988 | opp_overlap 3799874 GCTTATCTAACACAA GCGGGTCAG GAAA CTGGCCCGC TTTTTTCATTCAGTG TERM 4969 3799874 - 3799895 + T 100 -13.7 -5.28481 | opp_overlap 3799874 GCTTATCTAACACAA GCGGGTCAG GAAA CTGGCCCGC TTTTTTCATTCAGTG SeD_A3964 3800186 - 3799905 - | universal stress protein B uspA 3800628 - 3801062 + | universal stress protein A TERM 4970 3801158 - 3801175 + F 100 -10.5 -4.99043 | opp_overlap 3801158 GGTTATCAACAACAA CGCCCGC TTCT GTGGGCG TTTTGTTTATCCCCC TERM 4971 3801175 - 3801158 - f 74 -8.3 -3.99374 | opp_overlap 3801158 GGTTATCAACAACAA CGCCCGC TTCT GTGGGCG TTTTGTTTATCCCCC TERM 4972 3801479 - 3801502 + G 77 -4.4 -4.8622 | overlap 3801481 CGATTTGGCTATTAC GGCGTCCAGG GCAT CCTGGCGGTC TTTTTCGTTAAACAA TERM 4973 3801649 - 3801629 - g 76 -10.3 -3.76224 | opp_overlap 3801629 3801628 CTGTTAGGGACTAAA CGCACCCTG GTC CTGGGCGCG ATTGTGCTGGCGATT SeD_A3966 3801386 - 3802858 + | tripeptide permease TppB SeD_A3967 3803708 - 3802950 - | protein YhiQ TERM 4974 3803681 - 3803664 - G 74 -9.8 -3.7319 | opp_overlap 3803663 3803662 AGCCAGAACAGATAA GGCGCC GTCTGT GGCGCC CGTTTCATCCATTAA SeD_A3968 3805757 - 3803715 - | oligopeptidase A TERM 4975 3804810 - 3804824 + g 71 -4.2 -4.59773 | overlap 3804812 TTTGGCGAAGGCGCG CAGCTG GGC CAGCTC TTTTTCCCCCTGCGG TERM 4976 3805933 - 3805902 - R 73 -10.3 -3.01712 | gap 1, opp_overlap 3805927 GCCGCCCCTTTAACA TCATCCCGGCTTAC GTTTT ATAAGCCGGG-TGA CAACGTCAGCGCGTT SeD_A3969 3807210 - 3805939 - | putative phosphatase TERM 4977 3806070 - 3806094 + g 71 -11.4 -2.98823 | opp_overlap 3806059, overlap 3806087 TTAACGCCTGACACT GCGCTGACGA CAGGT TCGGCAGCGC TGTCTGTAGCAGAAC TERM 4978 3807094 - 3807082 - G 70 -9.1 -3.76492 | opp_overlap 3807082 3807082, overlap 3807083 CTCAAGGTCATTAAA GGCGA CGC TCGCC GAGTCGGGCGTCACG TERM 4979 3807856 - 3807820 - g 75 -5.7 -4.59773 | overlap 3807826 GCGGAGTTTCAAAAA GACAACCGCGCCCGCGT GGA ACGCGCTGACGGCTATC AGCAACTGAAAGCCA TERM 4980 3807953 - 3807932 - g 95 -10.9 -4.58773 | overlap 3807926 CTTATGAAATGAAAA CCGACTACC AGGC GGTAGTCAG CGGCATCAGCGAGGG yhiR 3807421 - 3808263 + | DNA utilization protein YhiR SeD_A3971 3808355 - 3808224 - | hypothetical protein TERM 4981 3809088 - 3809078 - g 80 -4.6 -5.00884 | overlap 3809080 AGCGGTGGTAAAAAA CGCC GAC GGCA GTCTGACTCTGGAAC gor 3808368 - 3809720 + | glutathione-disulfide reductase TERM 4982 3809758 - 3809723 - T 82 -13.3 -3.03441 | opp_overlap 3809718 GACCATGCGTTAATA TCTTGTGCGCCCATC TTCAAG GGTGGGCGCACAAGC CTGCATGATTAATAC SeD_A3973 3810810 - 3809767 - | L-asparaginase TERM 4983 3810792 - 3810809 + g 70 -2.8 -4.75472 | opp_overlap 3810781 GCAACACGGTGGCCA TGAAAA CTCTGA TTTTCA TTTTCTTCCTCTGAA SeD_A3974 3812188 - 3810869 - | anaerobic C4-dicarboxylate transporter DcuA TERM 4984 3811054 - 3811043 - G 71 -7.2 -3.94772 | overlap 3811041 CGGAATAAAGAAATA GCCG TTAA CGGC AGGCCAGGAGCCGAT SeD_A3975 3813087 - 3812242 - | PfkB domain protein TERM 4985 3812326 - 3812336 + g 78 -6.8 -4.56969 | overlap 3812324 3812325 GCCCTGCCGCATGGC GCGT AGC ACGC TTTCTTTATCGGGTT SeD_A3976 3814125 - 3813151 - | sugar isomerase TERM 4986 3814270 - 3814246 - R 100 -11.5 -6.02546 | GGAAACCAAAAAAAA TCGGGATCC GCGATCT GGATCCCGA TTCAGCCTGCTCTTC TERM 4987 3814307 - 3814320 + r 72 -6.7 -4.36914 | opp_overlap 3814307 GTAATGCTGACATCA TACGG TAAA CCGTA TTTTATCGCCGACAA SeD_A3977 3815023 - 3814304 - | GntR family regulatory protein TERM 4988 3814355 - 3814366 + g 71 -5.8 -4.33819 | opp_overlap 3814340 3814355 3814351 CTGTTGCGAAACGCA GGAG AGTT CTCC TTTGTTATCAATCAT TERM 4989 3814968 - 3814998 + g 84 -9 -4.35518 | overlap 3814965 3814954 GCCTCTTTTAAGGCG GCTTCAAGCTGCTT ATA AAGCGGTTTGGCGC TTTTACTGTCGGGTT SeD_A3978 3815349 - 3816998 + | trehalase TERM 4990 3817031 - 3817052 + T 88 -5.9 -5.60689 | opp_overlap 3817031 GAATCGCATCATAAA TGGCTGA CTGAATTT TCAGCCA TTTTTTATTGTCTGC SeD_A3979 3818600 - 3817011 - | putative inner membrane protein TERM 4991 3818638 - 3818616 - H 84 -8.4 -4.57073 | opp_overlap 3818619 3818629, overlap 3818619 TATCTTCCCTAAAAA GACGATCCCG CGA CGAGATCTTC GTTTTCTTTTAATTA TERM 4992 3818629 - 3818639 + H 75 -3.2 -5.19998 | opp_overlap 3818619 3818616, overlap 3818619 AAGACGATCCCGCGA CGAG ATC TTCG TTTTCTTTTAATTAT TERM 4993 3819146 - 3819173 + G 100 -12.1 -5.38249 | overlap 3819126 GCGAAACGCTTATTG CGCTGATGTTC AGCATC GGACATCAGCG TTTTTTATCATTAAT SeD_A3980 3818881 - 3819237 + | putative phage endolysin SeD_A3981 3819845 - 3819243 - | putative transcriptional regulator TERM 4994 3819701 - 3819715 + g 71 -4.2 -4.64992 | overlap 3819701 3819700 TATCCAGCATGACCA GCGC ATCCGGC GCGC TTTCTATTTTTTGCC SeD_A3982 3820473 - 3821375 + | LysR substrate binding domain protein SeD_A3983 3821448 - 3822476 + | putative ribonuclease TERM 4995 3823195 - 3823221 + G 74 -10 -3.64822 | GACGATAGGTATTTT CGCGCCGCTGCT GCT GGCGCTGGCGCG TTTCGGTCAGGGACT SeD_A3984 3822827 - 3824149 + | MFS transporter, metabolite:H+ symporter (MHS) family protein TERM 4996 3824179 - 3824152 - T 75 -11.2 -3.02144 | opp_overlap 3824151 3824152 3824176 TCAGGCGTTGTAATA GGGCGCCGGATG GCGT CATCCGGCGCGA CGTTTCACGTTACTG TERM 4997 3824152 - 3824180 + T 74 -11 -2.80464 | gap 1, opp_overlap 3824152, overlap 3824151 3824176 TCAGGCGTTGTAATA G-GGCGCCGGATG GCGT CATCCGGCGCGAC GTTTCACGTTACTGC SeD_A3985 3826249 - 3824189 - | AsmA family protein TERM 4998 3824320 - 3824351 + g 95 -10.1 -4.70659 | gap 1, opp_overlap 3824323 CCGCGCCGCGCGCAA TCAGCGGGCCGGGC TTGAC GCCC-GCCTGCGGA TTTTTAAATGTCCCA SeD_A3986 3827126 - 3826359 - | diguanylate phosphodiesterase SeD_A3987 3827301 - 3827185 - | hypothetical protein TERM 4999 3827427 - 3827409 - R 77 -8.8 -3.86822 | opp_overlap 3827411 3827415, overlap 3827410 GAACTGTCGCAGAAA GGCGCTGA TGT TCAGCGCG GCTTCGGCGGCGACA TERM 5000 3827426 - 3827410 - R 79 -12.3 -2.91772 | opp_overlap 3827411 3827415, overlap 3827409 AACTGTCGCAGAAAG GCGCTGA TGT TCAGCGC GGCTTCGGCGGCGAC TERM 5001 3828308 - 3828337 + r 74 -10.7 -3.25823 | gap 1, overlap 3828323 CTCTTGCCCGGTGGC GCTG-CGCTTACCG GGC CGGCAGGCGGCAGC TTACTGTGCCGCCGG SeD_A3989 3829783 - 3828338 - | protein YhjJ TERM 5002 3829880 - 3829860 - R 78 -5.3 -5.06414 | TCCTGGTAATAAAAA GACAGCCCC GGC AGGGATGCC TGAATATGACGTAAA TERM 5003 3830032 - 3830003 - R 75 -10 -3.59315 | overlap 3830005 TCAATTATGCGCAAA CACCCGCAGTCC TGGAAG GGACTACGGGCA TAAGTGGCGAGATTA TERM 5004 3830030 - 3830005 - R 85 -12.6 -3.37259 | overlap 3830003 AATTATGCGCAAACA CCCGCAGTCC TGGAAG GGACTACGGG CATAAGTGGCGAGAT dctA 3831331 - 3830045 - | aerobic C4-dicarboxylate transport protein TERM 5005 3831467 - 3831484 + r 79 -2.6 -5.28315 | overlap 3831466 3831469 AAAAAGTTTGAGCTG GCTCGC ACAAGC GCGACC TTTTTTAACTTTTGT SeD_A3991 3833495 - 3831489 - | protein YhjK TERM 5006 3832780 - 3832758 - G 72 -12 -2.73124 | opp_overlap 3832758, overlap 3832757 GGGCAGCTCGGAAAC CGGAAAACGC ATC GCGTTGTCCG TTTGCTCCTCGCGTT TERM 5007 3832758 - 3832780 + g 86 -12 -3.79519 | opp_overlap 3832758 3832757 GGGCAGCTCGGAAAC CGGAAAACGC ATC GCGTTGTCCG TTTGCTCCTCGCGTT TERM 5008 3833469 - 3833429 - G 81 -2 -5.28983 | gap 1, overlap 3833435 3833438 TGCAAAAGACAAAAA CAAACACCATGACAACGGC CGCA ACCATTGCCATC-TGTTTA ATTGTTAACGAGCGG SeD_A3992 3837211 - 3833669 - | cellulose synthase operon protein C TERM 5009 3835285 - 3835269 - G 71 -10.8 -3.30338 | opp_overlap 3835268 3835269 AGAACGGCGTCATAA GCGGCG CGGGC CGCCGC ATTATCGCCACGCTG TERM 5010 3836138 - 3836158 + g 78 -6.8 -4.59773 | gap 1 ATCGCGGCTGCTGCT GTGC-GGCG CCAT CGCCAGCGC TTTTTCAAACTGCGC TERM 5011 3836450 - 3836464 + g 73 -5.6 -4.58424 | TTTTACGCTGGCGTC GCTCAC CGG GAGAGC TTTTATCTGCTGGTA TERM 5012 3836481 - 3836527 + g 77 -8.1 -4.07568 | gap 2 TTTATCTGCTGGTAC CAGATGGCGGAGGCCGCGCTGCG TCC CGTA-C-TGGATTTCGCCATCTG TTTTAGCACCGCAAA bcsZ 3838302 - 3837193 - | cellulase TERM 5013 3837454 - 3837466 + g 81 -6.9 -4.81083 | opp_overlap 3837443 GACATCCACTTTCTC CGGTG GAA CGCCG TTTTTCATCGTTAAC TERM 5014 3837785 - 3837797 + g 80 -9.1 -4.09685 | CGCCAGCTATTCGCC TCGGC AAA GCCGA TTTTGCCAGGTAGCA bcsB 3840606 - 3838306 - | cyclic di-GMP binding protein celA 3843241 - 3840617 - | cellulose synthase catalytic subunit TERM 5015 3841967 - 3841956 - G 75 -5.8 -4.65933 | opp_overlap 3841955 GATCCGCAAAAGAAA GTGG CGTC CCAC ATATCGTTACCGTCC TERM 5016 3842088 - 3842070 - G 77 -7.4 -4.30719 | TCCGGGGAGAAGAAA TGATGCGG CGT CTGCATCA TCGCCAGCTGTTTTT TERM 5017 3843161 - 3843149 - G 74 -10.5 -3.53224 | GAGCGCTGCGCTAAA CGGCG ACG CGCCG TGGCGGCGGTAACCC SeD_A3996 3843990 - 3843238 - | YhjQ protein SeD_A3997 3844194 - 3843991 - | hypothetical protein SeD_A3998 3844305 - 3844418 + | hypothetical protein TERM 5018 3844726 - 3844709 - g 72 -2.6 -4.87665 | CCGGATTCAGAAAAA GGGCTA TACTCT TTGCCC CACGATTTGCTTTGT TERM 5019 3845026 - 3845015 - g 91 -7.2 -4.8622 | overlap 3845016 3845017 TGGTGTAACGAAAAA GGCG TCAG CGCC CGACAGCAGTTATTG TERM 5020 3845707 - 3845725 + G 76 -3.1 -5.01535 | gap 1, opp_overlap 3845685, overlap 3845701 TATTATGACCATCGG CGGCAACC GTCT GGT-GCTG TTTTTATCATTCTGC SeD_A3999 3844451 - 3846010 + | hypothetical protein SeD_A4000 3846007 - 3846198 + | hypothetical protein TERM 5021 3846569 - 3846582 + G 87 -2.3 -5.61596 | overlap 3846570 CGCCATCTTCGTACT GCTGG TTGC CTGGC TTTTTTTATCACAGT TERM 5022 3847260 - 3847211 - g 88 -11.3 -4.10007 | opp_overlap 3847211 3847255, overlap 3847212 AGAAGTTCGCGAAAA CGGCGGTATGCAGAGCGAACTGA TGAA CCAGTCCGGCCTGCCAACCGCCC TGCTGTCATTCGACG TERM 5023 3847259 - 3847212 - g 91 -14.8 -3.05522 | opp_overlap 3847211 3847255, overlap 3847211 GAAGTTCGCGAAAAC GGCGGTATGCAGAGCGAACTGA TGAA CCAGTCCGGCCTGCCAACCGCC CTGCTGTCATTCGAC TERM 5024 3847436 - 3847414 - g 81 -8.5 -4.25104 | gap 1, opp_overlap 3847399, overlap 3847429 CCGGCGTCAGCAAAA CG-GCGGATT ATAA AATCCGCGCG CAGAAACTGTTCGAT SeD_A4001 3846195 - 3847874 + | membrane protein ; endoglucanase BcsG TERM 5025 3847915 - 3847876 - f 100 -18.6 -3.73775 | opp_overlap 3847884 3847901, overlap 3847884 CTTACCCGCAGTAAA CCGAAAAAGGCCGCAAGG TTTC CCCTGCGGCCTGGTTCGG GCGCATGTTGCCATT TERM 5026 3847884 - 3847907 + F 83 -13.8 -2.71144 | opp_overlap 3847876 3847884, overlap 3847901 CAGTAAACCGAAAAA GGCCGCAAGG TTTC CCCTGCGGCC TGGTTCGGGCGCATG TERM 5027 3847907 - 3847884 - f 100 -16 -4.82855 | opp_overlap 3847884 3847901, overlap 3847876 CAGTAAACCGAAAAA GGCCGCAAGG TTTC CCCTGCGGCC TGGTTCGGGCGCATG TERM 5028 3848128 - 3848170 + F 80 -6.9 -4.60797 | gap 1, opp_overlap 3848127 TTGGGTTCAAGTTAG CCCCCGTCAGGTTGCCAAGT TTAT ACCAGTCAACGTG-CGGGGG TTTTCTCTATCCAGC SeD_A4004 3848448 - 3848588 + | hypothetical protein TERM 5029 3848653 - 3848687 + F 95 -13 -4.07568 | opp_overlap 3848641 3848646 GCACTATAGCCTGGT TATAGGCAGCATTCTT TAT GAGAGAGCTGCCTATA TTTTGGGCAGGGGGC SeD_A4005 3848706 - 3850004 + | inner membrane transport protein YhaO SeD_A4006 3851118 - 3850105 - | dipeptide transport ATP-binding protein DppF dppD 3852098 - 3851115 - | dipeptide ABC transporter, ATP-binding protein DppD dppC 3853011 - 3852109 - | dipeptide ABC transporter, permease protein DppC TERM 5030 3852529 - 3852505 - G 71 -8.5 -3.87815 | CGGCAGCGCCACAAA CGTCAACGCCA GCG CAGCGTTGCCG ATGGAGGGGCCGAAG dppB 3854040 - 3853021 - | dipeptide ABC transporter, permease protein DppB TERM 5031 3854178 - 3854190 + r 80 -6.9 -4.56133 | GCCTACACAACACCG GGGCG CAG CGCTC TTTTAATTATTCGAC dppA 3855777 - 3854197 - | dipeptide ABC transporter, periplasmic dipeptide-binding protein TERM 5032 3854950 - 3854962 + g 90 -6.3 -5.23765 | overlap 3854943 CAGACCGGCCTGCTC CATCA GGT TGATG TTTTTATCTTCTTTC TERM 5033 3855412 - 3855424 + g 74 -3.3 -4.84359 | AGACACTTTATGGTA CGGGT TCT GCTCG TTTTTCTGCCGGTCA TERM 5034 3855576 - 3855599 + g 84 -8.8 -4.27316 | opp_overlap 3855573 3855575 ACTTCTCAGCAAGAC CCGGGATCAC TTCC GTGGTGCCGG TTTTGAATTCAACCA TERM 5035 3856345 - 3856325 - R 95 -12.6 -4.00411 | CAAAATTGTAAATAA GTAGGCCG TCGTG CGGCCTAC CGCGATCACAAAAAC SeD_A4011 3857685 - 3856360 - | xanthine/uracil/vitamin C permease TERM 5036 3856988 - 3856977 - G 83 -5.8 -4.84527 | CGGAGAGATCAAAAA TCGG CCAG CCGA ACGGCAAAAGCTGTG TERM 5037 3857739 - 3857714 - R 100 -11.1 -5.69023 | opp_overlap 3857713 3857712 3857715, overlap 3857717 AAAACATCAAAAAAA TAACCGCCAGC GCGG GCTGGCGGTCT GCATTATTTCAACCA TERM 5038 3857715 - 3857738 + r 78 -12.4 -2.71101 | opp_overlap 3857714 3857717, overlap 3857713 3857712 AAACATCAAAAAAAT AACCGCCAGC GCGG GCTGGCGGTC TGCATTATTTCAACC TERM 5039 3857736 - 3857717 - R 100 -15 -4.86226 | opp_overlap 3857715 3857713 3857712, overlap 3857714 ACATCAAAAAAATAA CCGCCAGC GCGG GCTGGCGG TCTGCATTATTTCAA SeD_A4012 3858867 - 3857743 - | hypothetical protein TERM 5040 3858742 - 3858755 + g 71 -9.5 -3.53012 | opp_overlap 3858741 3858742 GTCCACCAGGTAAAC CCGCC CTTC GGCGG TTTGCGGCGCAAAAA SeD_A4013 3858920 - 3859033 + | hypothetical protein TERM 5041 3859337 - 3859326 - g 75 -5.8 -4.56775 | opp_overlap 3859326 3859325 ATGGCGCTGGAAAAA CAGC ATGC GCTG ATTCTGGTGCCGCCG TERM 5042 3859783 - 3859795 + G 86 -10.5 -4.07568 | ACACCTTTGCCAGCG GCGCG GTA CGCGC TTTTCAGGAACAAGA TERM 5043 3859848 - 3859831 - g 70 -6.9 -4.19678 | opp_overlap 3859832, overlap 3859832 CCATACCTGAACAAA TGCGGGT GGTC ACCCGCT ATGATGGTATCCGCG SeD_A4014 3859017 - 3860024 + | regulatory protein, LacI:Periplasmic binding protein/LacI transcriptional regulator TERM 5044 3860050 - 3860065 + T 72 -9 -3.55368 | CTTGCCACTGCGGGC CGTTGC TGAC GCAACG TTCTCTCGCTTCGCT TERM 5045 3860140 - 3860158 + T 79 -8.8 -4.03204 | opp_overlap 3860141, overlap 3860141 TTCAGATACAAAAAA ACCTGCTC GCT GAGCAGGG TTTCTGAATTTGGTC TERM 5046 3860141 - 3860157 + T 80 -12.3 -3.01199 | opp_overlap 3860141, overlap 3860140 TCAGATACAAAAAAA CCTGCTC GCT GAGCAGG GTTTCTGAATTTGGT TERM 5047 3860157 - 3860141 - T 100 -12.3 -5.76633 | opp_overlap 3860141 3860140 TCAGATACAAAAAAA CCTGCTC GCT GAGCAGG GTTTCTGAATTTGGT TERM 5048 3860201 - 3860219 + T 74 -10.2 -3.14211 | overlap 3860218 TGACTCGCCACTGCG TGGCTCGC CCT GCGGGCCG TTGCTGACGCAACGT TERM 5049 3860218 - 3860233 + T 72 -9 -3.55368 | overlap 3860201 GCTCGCCCTGCGGGC CGTTGC TGAC GCAACG TTCTCTCGCTTCGCT TERM 5050 3860327 - 3860309 - T 100 -14.6 -5.76633 | opp_overlap 3860309 TCAGATACAAAAAAA CCCTGCTC ATT GAGCAGGG TTTCTGAATTTGGTC TERM 5051 3860309 - 3860327 + T 100 -14.6 -4.03204 | opp_overlap 3860309 TCAGATACAAAAAAA CCCTGCTC ATT GAGCAGGG TTTCTGAATTTGGTC SeD_A4017 3862196 - 3860505 - | membrane-associated sulfatase TERM 5052 3862406 - 3862389 - R 100 -12.7 -4.49644 | opp_overlap 3862400 ACTAAAAATGGAAAA GGGCCAG CGAA CTGGCCC TCAGTGATTATTCGT SeD_A4018 3862941 - 3862414 - | protein LpfE SeD_A4022 3867292 - 3866594 - | putative gram-negative pili assembly chaperone, N- domain TERM 5053 3866713 - 3866727 + g 80 -4.2 -5.1287 | overlap 3866715 TCAATGAGCCTTTTG CCGGAA CCA TTCCCG TTTTTTCAATATCAC TERM 5054 3866901 - 3866921 + g 86 -7.5 -4.74103 | AGTTTTAAGCGGGTA CGTACGGCG ATC TGCAGTACG TTTTTAGCTTCCGCG TERM 5055 3867324 - 3867346 + r 93 -14.2 -3.60094 | opp_overlap 3867324, overlap 3867318 CTCCGCTGGAAAAAA TGGCAACGGG ATT TCCGTTGCCA TTATGATTGTCTGTA TERM 5056 3867346 - 3867324 - R 100 -13.5 -5.00616 | opp_overlap 3867324 3867318 CTCCGCTGGAAAAAA TGGCAACGG GATTT CCGTTGCCA TTATGATTGTCTGTA SeD_A4023 3867901 - 3867377 - | long polar fimbria protein A TERM 5057 3867410 - 3867436 + g 87 -8 -4.63932 | overlap 3867406 3867412 GAAGTCCACTTCTGC GTTACCGTAACC AGT GGTTACAGTATC TTTTGTTGCAACGTA TERM 5058 3867412 - 3867434 + g 76 -9.2 -3.93367 | overlap 3867406 3867410 AGTCCACTTCTGCGT TACCGTAACC AGT GGTTACAGTA TCTTTTGTTGCAACG TERM 5059 3868229 - 3868211 - R 100 -5.9 -6.23545 | overlap 3868213 GCTAAATAAAAAAAA GGGCACC AAATG GGTGCGC TGTACGCCTGGTGTT SeD_A4024 3869114 - 3868410 - | putative lipase TERM 5060 3869072 - 3869049 - G 100 -8 -5.28176 | overlap 3869052 3869063 3869064 GGTATTGATAAAAAA CGAGCAGGCC ATAA GGCCCGCCAG ACAACACAACGTCCG TERM 5061 3869069 - 3869052 - G 73 -10.5 -3.45403 | overlap 3869049 3869063 3869064 ATTGATAAAAAACGA GCAGGCC ATAA GGCCCGC CAGACAACACAACGT TERM 5062 3869593 - 3869611 + G 78 -6.6 -4.59027 | opp_overlap 3869594, overlap 3869594 TTGCGATGGAGCAAA ACGGCGAG TCT TTCGCCGA TTTTGTCTGGTCATT TERM 5063 3869610 - 3869594 - g 84 -9.4 -4.2828 | opp_overlap 3869594 3869593 TGCGATGGAGCAAAA CGGCGA GTCTT TCGCCG ATTTTGTCTGGTCAT TERM 5064 3869594 - 3869610 + G 70 -10.1 -3.34332 | opp_overlap 3869594, overlap 3869593 TGCGATGGAGCAAAA CGGCGAG TCT TTCGCCG ATTTTGTCTGGTCAT SeD_A4025 3869271 - 3869852 + | dna-3-methyladenine glycosylase 1 SeD_A4026 3869830 - 3870270 + | acetyltransferase, gnat family SeD_A4027 3872572 - 3870239 - | biotin sulfoxide reductase SeD_A4028 3872725 - 3873387 + | inner membrane lipoprotein YiaD TERM 5065 3873562 - 3873584 + F 77 -6.9 -4.54727 | TAATAAGCCTGTTCC GGTTGGCGC ATGCC GCGCTTACC TTTTGATTTACGGAG TERM 5066 3873815 - 3873796 - g 82 -5.6 -5.00616 | gap 1, overlap 3873797 CGCTGCTGGAAAAAA TGCCG-GCG CTA CGCGCGGCG TCAACCATCTCGGTG SeD_A4029 3873606 - 3874580 + | 2-ketogluconate reductase SeD_A4030 3875340 - 3874630 - | hypothetical protein TERM 5067 3874852 - 3874824 - G 70 -9.6 -3.34517 | gap 1, opp_overlap 3874829, overlap 3874822 ACTGCTGCGTAAAGA TCTGC-GCCGCCG GGAT CAGCGGCTGCAAA GCATCTGCCGGCACG SeD_A4031 3875621 - 3875490 - | hypothetical protein TERM 5068 3875554 - 3875532 - G 81 -4.1 -5.252 | gap 1 CACTGCGATAAAAAA CGC-GGCAAG AAAG CTTTCCAGCG GGGGATGTAATATTT SeD_A4032 3875779 - 3876069 + | helix-turn-helix domain protein TERM 5069 3876063 - 3876079 + F 70 -5.1 -4.45168 | opp_overlap 3876062 AAGTAAGCAATTGAT GGAGTAA TTT TTACCCC TTTCTGTTTTAACGG TERM 5070 3876092 - 3876110 + F 87 -10.3 -4.07687 | CCCTTTCTGTTTTAA CGGTCCT GCGCA AGGACCG TTTTCCCCGCCCGAT SeD_A4033 3876357 - 3876569 + | cold shock DNA-binding protein TERM 5071 3876594 - 3876613 + F 100 -11.4 -6.09888 | GCTCAGAATTTTGAA TCCCTGCC TGAT GGCGGGGA TTTTTTTTATTCCAA SeD_A4034 3876743 - 3877282 + | hypothetical protein TERM 5072 3877315 - 3877287 - T 100 -8.9 -5.06451 | opp_overlap 3877289, overlap 3877288 CATTACGTTAAAAAA TGCCCGATAAC ATAATGG GTTATCGGGCC TATAAAACGCCAACA TERM 5073 3877314 - 3877288 - T 88 -12.4 -3.63148 | opp_overlap 3877289, overlap 3877287 ATTACGTTAAAAAAT GCCCGATAAC ATAATGG GTTATCGGGC CTATAAAACGCCAAC TERM 5074 3877445 - 3877467 + T 93 -7 -5.72622 | opp_overlap 3877445 GAGGCATCAGCGAAA GAGTCCATTT AAT ACATGGGCTC TTTTTTGTTTCTGGC SeD_A4035 3878392 - 3878126 - | putative cytoplasmic protein TERM 5075 3879973 - 3880000 + r 77 -7.1 -4.46112 | opp_overlap 3879962 3879979, overlap 3879979 ACTATTTATGTTATA AAAAAACCTGC CCGAGA GCAGGTTTTTG TTTATTTAACTGAAC TERM 5076 3879979 - 3879994 + r 91 -6.1 -5.5454 | opp_overlap 3879979, overlap 3879973 TATGTTATAAAAAAA CCTGC CCGAGA GCAGG TTTTTGTTTATTTAA TERM 5077 3879994 - 3879979 - R 91 -6.8 -5.626 | opp_overlap 3879973 3879979 TATGTTATAAAAAAA CCTGCC CGAG AGCAGG TTTTTGTTTATTTAA glyS 3882087 - 3880018 - | glycyl-tRNA synthetase, beta subunit TERM 5078 3881528 - 3881518 - G 71 -8.2 -3.91897 | CGGCTCACCCATAAA GCGG TGG CCGC GAATGACGCGGTCAG glyQ 3883008 - 3882097 - | glycyl-tRNA synthetase, alpha subunit TERM 5079 3882274 - 3882324 + g 74 -4.5 -4.78107 | gap 1, overlap 3882303 3882306 TTTCAGAATACGCTC GTAGGCCGGCAGCGGCAGCGGGTT TTCC AGCGC-CAGCAGCTGCTGGGCTTC TTTTTCATACTGCTC TERM 5080 3882303 - 3882321 + g 75 -6.7 -4.49314 | gap 1, overlap 3882274 3882306 GCAGCGGGTTTTCCA GCGCCAGC AGCT GCTGG-GC TTCTTTTTCATACTG TERM 5081 3882622 - 3882640 + g 77 -8 -4.16251 | TTCCCAGCCGAGTCC CCAGGCGC CCA GCGTCGGG TTTTCCCAGTTATCT TERM 5082 3883195 - 3883171 - R 82 -7.1 -4.7889 | AGAAAGATGTAAAAA CTGCCCATCTG CAT CAAAAGAGCAG ACAAAACTCTCTTTA SeD_A4039 3883449 - 3883147 - | hypothetical protein TERM 5083 3883822 - 3883838 + G 80 -4.4 -5.1287 | gap 1, overlap 3883820 TTTTTTGGCGAGCGC TG-CGCG CAAC CGCGGCA TTTTTTACGTATCGC SeD_A4040 3883615 - 3884610 + | acyltransferase 3 TERM 5084 3884618 - 3884635 + T 71 -9.9 -3.22774 | opp_overlap 3884612 3884618 TTAGCTAAACGACAA TGATGGC TCCG GCCATCA TTCATCATCACTGTA TERM 5085 3884635 - 3884618 - T 75 -9.9 -3.61609 | opp_overlap 3884618, overlap 3884612 TTAGCTAAACGACAA TGATGGC TCCG GCCATCA TTCATCATCACTGTA SeD_A4041 3884986 - 3884633 - | yiaA/B two helix domain protein SeD_A4042 3885154 - 3885017 - | hypothetical protein TERM 5086 3885128 - 3885153 + g 88 -13.4 -3.45054 | opp_overlap 3885128 AATATTTACGGGAAA TGCCTTTCGG CCAAAA CCGAAAGGCA TTCTGACTTATGACA TERM 5087 3885153 - 3885128 - G 95 -14.1 -3.61922 | opp_overlap 3885128 AATATTTACGGGAAA TGCCTTTCGGC CAAA ACCGAAAGGCA TTCTGACTTATGACA xylB 3886615 - 3885161 - | xylulokinase TERM 5088 3885835 - 3885821 - G 82 -11.4 -3.91897 | CGGTTTACTCAGAAA GCCGTC GCT GACGGC AAAATAGACGCCCGA xylA 3888037 - 3886715 - | xylose isomerase SeD_A4045 3888400 - 3889578 + | xylose operon regulatory protein bax 3890562 - 3889639 - | protein bax SeD_A4047 3890727 - 3890593 - | hypothetical protein TERM 5089 3891011 - 3891026 + G 73 -6.1 -4.42806 | AACCCTGCGAAGGCG CGCCA CCGCAA TGGCG TTTGTTTAAAGATGG SeD_A4048 3890779 - 3892806 + | alpha-amylase TERM 5090 3893170 - 3893158 - g 80 -10.5 -3.91858 | opp_overlap 3893162 CAGATATGGTAGAAA GCGGC AAA GCCGC TGATGCGCTTTGTAA SeD_A4049 3892980 - 3894230 + | valine--pyruvate aminotransferase SeD_A4050 3894740 - 3894267 - | protein AegA SeD_A4051 3895657 - 3894857 - | hth-type tranScriptional regulator yiaj SeD_A4052 3895868 - 3895722 - | hypothetical protein SeD_A4053 3895887 - 3896885 + | 2,3-diketo-L-gulonate reductase SeD_A4054 3896897 - 3897361 + | YiaL TERM 5091 3897506 - 3897518 + G 70 -9.1 -3.67052 | CTCCGGATATCCGGG GGCTG GAG CAGCC TTGTCTTGAACATCT TERM 5092 3897538 - 3897555 + G 70 -9.1 -3.62597 | opp_overlap 3897531 CTTGAACATCTTCAC CCGCTCG GCGA CGAGTGG TTATTGCGCCATACA TERM 5093 3897618 - 3897638 + G 86 -9.7 -4.2803 | AATGGAAACCATGCG CCGCCGT AGCGAAA ACGGCGG TTTTGGATTAGCGTC SeD_A4055 3897385 - 3898317 + | YiaX1 SeD_A4056 3898456 - 3898929 + | 2,3-diketo-l-gulonate trap transporter small permease protein yiam SeD_A4057 3898932 - 3900209 + | 2,3-diketo-l-gulonate trap transporter large permease protein yian SeD_A4058 3900221 - 3901207 + | trap transporter solute receptor, dctp family TERM 5094 3902186 - 3902221 + G 90 -5.3 -5.28826 | gap 1, opp_overlap 3902183 3902182 3902185 3902207, overlap 3902188 GACGAGATCAACCAG GCGGTCGCCAGCCTGC CGAAA GCCGG-TAGCGACCTC TTTTTTCTGCCGTTT TERM 5095 3902188 - 3902219 + G 74 -6.5 -4.26475 | gap 1, opp_overlap 3902183 3902182 3902185 3902207, overlap 3902186 CGAGATCAACCAGGC GGTCGCCAGCCTGC CGAAA GCCGG-TAGCGACC TCTTTTTTCTGCCGT SeD_A4059 3901211 - 3902707 + | L-xylulose/3-keto-L-gulonate kinase sgbH 3902704 - 3903366 + | 3-keto-L-gulonate-6-phosphate decarboxylase SgbH SeD_A4061 3903359 - 3904219 + | putative hexulose-6-phosphate isomerase sgbE 3904213 - 3904908 + | L-ribulose-5-phosphate 4-epimerase sgbE SeD_A4063 3905884 - 3905069 - | putative transcriptional regulator TERM 5096 3905476 - 3905501 + g 71 -6 -4.33105 | opp_overlap 3905477, overlap 3905477 3905479 TCAGCAGCACGATGA ACTCCAGCGC CGGGCT GCGCTGGTGC TTTTCCTGCTCGTTC TERM 5097 3905545 - 3905533 - G 75 -6.2 -4.60924 | overlap 3905534 TAAACTGGCGAAAAA GCGC AATCA GCGC CTGCGGATCGGCAAC TERM 5098 3906849 - 3906835 - g 70 -3.4 -4.8083 | GAAGAGTACGAAAAA CGCGGC CAG ACCTCG TACTGGCATACCTAC SeD_A4064 3906148 - 3908103 + | hypothetical protein aldB 3909759 - 3908221 - | aldehyde dehydrogenase B SeD_A4066 3909928 - 3910809 + | putative transcriptional regulator TERM 5099 3911036 - 3911010 - T 100 -8 -5.69262 | opp_overlap 3911010 CCAGAAAAATAAAAA GCACATCTGG TTCATTT CCTGATGTGC TTTTTATAAAGCAAC TERM 5100 3911010 - 3911036 + T 84 -8 -4.82901 | opp_overlap 3911010 CCAGAAAAATAAAAA GCACATCTGG TTCATTT CCTGATGTGC TTTTTATAAAGCAAC selB 3912944 - 3911094 - | selenocysteine-specific translation elongation factor TERM 5101 3911297 - 3911318 + g 74 -7.3 -4.13945 | CGAAAGCGACAATCC GATCGTTAC GATA GTACCGATC TTTTACGATCGCGGT selA 3914332 - 3912941 - | L-seryl-tRNA selenium transferase SeD_A4069 3915039 - 3914431 - | glutathione S-transferase, C- domain TERM 5102 3915253 - 3915238 - H 86 -4 -5.50723 | GCACCAAAATAAAAA TGTGAA ATAT CTCACA TAAAATGGCCTTTTA SeD_A4070 3915515 - 3917431 + | pts system mannitol-specific eiicba component TERM 5103 3918043 - 3918029 - g 74 -10 -3.63744 | overlap 3918027 TCGCCTGTGAAAATA TGGTGC GCG GCACCA CGCAGCTCAAAGGTC TERM 5104 3918729 - 3918718 - g 86 -7.2 -4.68593 | overlap 3918719 CTGATTACCGAAAAA GGCC CGCA GGCC GCGCTGGCGCAAATT mtlD 3917662 - 3918810 + | mannitol-1-phosphate 5-dehydrogenase mtlR 3918807 - 3919397 + | mannitol operon repressor SeD_A4073 3919616 - 3919407 - | hypothetical protein SeD_A4074 3919907 - 3920269 + | hypothetical protein SeD_A4075 3920350 - 3920511 + | hypothetical protein TERM 5105 3921000 - 3920981 - g 76 -3.4 -4.99056 | opp_overlap 3920991, overlap 3920991 CAACACAACCAAAAA GGTCACCG AAGT CGTTGGCC GCGTTGAACGCAAAC TERM 5106 3921245 - 3921216 - g 81 -3.5 -5.14563 | gap 1, overlap 3921217 TGGGGTACGAAAAAA CCTTCCGAGGCAAA AGA TCTGCCTCGCT-GG AAACAACTCCTGCTC TERM 5107 3921340 - 3921330 - g 83 -8.2 -4.43012 | ACGCTAACATTAAAA GGCG TAT CGCC CAATAATCTTAAGTA SeD_A4076 3920757 - 3921440 + | putative inner membrane lipoprotein SeD_A4077 3921484 - 3925512 + | putative autotransporter TERM 5108 3925562 - 3925540 - f 100 -16.4 -3.83205 | opp_overlap 3925540 ACTCCCGACATCAAA GGCAATGGCA TAA TGCCATTGCC TTTTCACTTCCCTTT TERM 5109 3925540 - 3925562 + F 100 -16.4 -4.30448 | opp_overlap 3925540 ACTCCCGACATCAAA GGCAATGGCA TAA TGCCATTGCC TTTTCACTTCCCTTT lldP 3925811 - 3927466 + | L-lactate permease SeD_A4079 3927463 - 3928239 + | putative L-lactate dehydrogenase operon regulatory protein LldR SeD_A4080 3928236 - 3929426 + | L-lactate dehydrogenase (cytochrome) SeD_A4081 3929490 - 3929963 + | RNA methyltransferase, TrmH family, group 2 SeD_A4082 3931086 - 3930031 - | transcriptional regulator, LacI family TERM 5110 3930512 - 3930525 + g 72 -3.8 -4.72272 | AAAAGATACTCCCCC GTCG CCTGCC CGAC TTTTTCATGGGAAAA SeD_A4083 3931354 - 3932550 + | mandelate racemase/muconate lactonizing enzyme TERM 5111 3932558 - 3932576 + F 79 -11.7 -3.1352 | overlap 3932554 GCCCTTAACCCGACT GGCGGGA ATCCG TCCCGCC TCTCTTACCTTACAG TERM 5112 3932656 - 3932641 - g 71 -4.6 -4.57503 | overlap 3932642 GAACACAATAATAAA GCGCAC AAAA GTGCGT CATACCATTCTTATA SeD_A4084 3932624 - 3933934 + | probable glucarate transporter TERM 5113 3933961 - 3933994 + T 100 -8.3 -5.32944 | gap 2 GCGAATTCTTCGCTC CGCTGTTCCG--GGA TTGCAC TCCATCGGAACAGCG TTTTTTAGTTGTACC cysE 3934838 - 3934017 - | serine O-acetyltransferase TERM 5114 3934863 - 3934892 + r 84 -10.8 -3.86194 | gap 1, opp_overlap 3934863 3934866 CAGACGGGCAGAAAA CGA-CCAACCCGT TCTGT GCGGGTTGGGTCG TTTATGCAAACAGTT TERM 5115 3934892 - 3934863 - R 90 -10.1 -4.39426 | gap 1, opp_overlap 3934863, overlap 3934866 CAGACGGGCAGAAAA CGA-CCAACCCG TTCTGTG CGGGTTGGGTCG TTTATGCAAACAGTT TERM 5116 3934888 - 3934866 - R 74 -10.6 -3.17598 | opp_overlap 3934863, overlap 3934863 ACGGGCAGAAAACGA CCAACCCG TTCTGTG CGGGTTGG GTCGTTTATGCAAAC SeD_A4086 3935935 - 3934916 - | NAD-dependent glycerol-3-phosphate dehydrogenase TERM 5117 3935227 - 3935202 - G 71 -9.7 -3.56821 | gap 1, overlap 3935219 ACCAGATCGCCTAAA CCCGCCATCCCC ATA AAGG-TGGCGGG ATCGGCACCAAGCGC TERM 5118 3935933 - 3935949 + g 76 -10.9 -3.69283 | overlap 3935944 CGCATTACTTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 3936402 - 3935935 - | protein-export chaperone SecB grxC 3936697 - 3936446 - | glutaredoxin 3 SeD_A4089 3937215 - 3936784 - | rhodanese domain protein TERM 5119 3936955 - 3936969 + g 83 -10 -4.08485 | GTGCTTTTCCAGTTC GCCAAC ATT GTTGGC TTTGATTTCGCTCGG TERM 5120 3937981 - 3938008 + G 71 -11.2 -2.95476 | gap 1, opp_overlap 3937969 3937979 3937980 3937998, overlap 3937998 ATTCGAAGACAAATT CGCCGCGCTGGGC AAA GGCC-GCGTGGCG TCTATCGTCGGTCGT gpmI 3937463 - 3939007 + | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TERM 5121 3939089 - 3939115 + G 100 -14.5 -3.81022 | overlap 3939110 GTCAGGCCTTTGTTC TACGCCAGCGT ACTTA GCGCTGGCGTA TTGTTGTGCGCCTTT TERM 5122 3940215 - 3940238 + G 73 -5.9 -4.43877 | opp_overlap 3940193 CCCTTGTGGGCAGTA GCGGCGGTC AGGGCA GACCTTCGC TTTATTTCGAAATTC SeD_A4091 3939017 - 3940300 + | M23 peptidase domain protein TERM 5123 3940436 - 3940426 - g 74 -6.8 -4.2349 | overlap 3940429 CCCGCACACGGAAAA CCAG GTT CTGG CGCTGCCGCCAAACA TERM 5124 3941132 - 3941120 - g 76 -3.3 -5.09426 | TGCAAGCCGAAAAAA CCGCT GCA ACCGG TCTACGCTACGCGCT SeD_A4092 3940304 - 3941266 + | divergent polysaccharide deacetylase SeD_A4093 3942287 - 3941253 - | glycosyl transferase, group 2 family protein TERM 5125 3942032 - 3942018 - G 71 -7.8 -3.92075 | opp_overlap 3942019 ATCTGCATCGACAAA GGCGAC ATA ATCGCC GGTCGCTGCTTGCAG TERM 5126 3942505 - 3942525 + r 71 -6.8 -4.13767 | opp_overlap 3942505 TTCCCTAACAAAAAA GGTTGGCG AATGA CACCAACC TTTTACGATGAAACG TERM 5127 3942525 - 3942505 - R 100 -9 -5.4505 | opp_overlap 3942505 TTCCCTAACAAAAAA GGTTGGCG AATGA CACCAACC TTTTACGATGAAACG TERM 5128 3942578 - 3942539 - R 76 -8.8 -3.78775 | gap 1, opp_overlap 3942539 3942548 3942550, overlap 3942540 3942548 3942550 CCTTTTACGATGAAA CGTATATCAGACCCGATAA ATA TCATCGGGTCTC-TATACA TATTAATCCCAGCTC TERM 5129 3942570 - 3942548 - R 78 -12.8 -2.68799 | opp_overlap 3942548 3942539 3942550, overlap 3942540 3942539 3942550 ATGAAACGTATATCA GACCCGATAA ATA TCATCGGGTC TCTATACATATTAAT TERM 5130 3942548 - 3942570 + r 73 -10.6 -2.95448 | opp_overlap 3942540 3942539 3942548 3942550, overlap 3942539 3942550 ATGAAACGTATATCA GACCCGATAA ATA TCATCGGGTC TCTATACATATTAAT tdh 3943606 - 3942581 - | L-threonine 3-dehydrogenase TERM 5131 3943429 - 3943446 + g 76 -2.7 -5.00884 | ATTCATGCCCCACGA CCATC GGAACCGG GATGG TTTTTTGCGACCAGT kbl 3944812 - 3943616 - | 2-amino-3-ketobutyrate coenzyme A ligase rfaD 3945015 - 3945947 + | ADP-glyceromanno-heptose 6-epimerase TERM 5132 3946439 - 3946479 + G 80 -12 -3.3197 | opp_overlap 3946450, overlap 3946443 3946450 CAGCTCCTGGTTAGC GAGGGTGAAAAGTCGTTG ATACG CAGCGACTTTTCGCTATC TTCTGAACGTCCTCT TERM 5133 3946443 - 3946475 + G 87 -13.6 -3.17622 | opp_overlap 3946450, overlap 3946439 3946450 TCCTGGTTAGCGAGG GTGAAAAGTCGTTG ATACG CAGCGACTTTTCGC TATCTTCTGAACGTC TERM 5134 3946450 - 3946468 + G 74 -6.7 -4.28977 | opp_overlap 3946450, overlap 3946443 3946439 TAGCGAGGGTGAAAA GTCGTTG ATACG CAGCGAC TTTTCGCTATCTTCT rfaF 3945950 - 3946996 + | lipopolysaccharide heptosyltransferase II rfaC 3946996 - 3947949 + | lipopolysaccharide heptosyltransferase I SeD_A4099 3947989 - 3949203 + | O-antigen ligase TERM 5135 3949239 - 3949210 - T 100 -13.7 -6.08563 | opp_overlap 3949210 AATAGATAAAAAAAA CGCGCTGATAC TTATTACG GTATCAGCGCG TTTTCCATCGTCCGG TERM 5136 3949210 - 3949239 + T 100 -14.4 -4.21194 | opp_overlap 3949210 AATAGATAAAAAAAA CGCGCTGATACT TATTAC GGTATCAGCGCG TTTTCCATCGTCCGG SeD_A4100 3950406 - 3949261 - | lipopolysaccharide 1,2-N-acetylglucosaminetransferase TERM 5137 3950965 - 3950937 - R 74 -6 -4.57341 | AATTTTCTTTAAAAA GCCCCCTTTTTC TCGGC GATAAAAGGAGC GAATAATTAAACAGT SeD_A4103 3952162 - 3951464 - | lipopolysaccharide core biosynthesis protein RfaY TERM 5138 3951932 - 3951959 + g 100 -8 -5.46698 | gap 1, opp_overlap 3951938 GTAGTAATCTCCTTT TACT-AACGATTT GAA AAATCGTTCAGTA TTTTTTACTTTTGGA TERM 5139 3952105 - 3952136 + g 74 -2.3 -5.04265 | overlap 3952106 3952108 3952110 ATATCTCAATGTATT TTTCACCGTCTTT TTTGAC AAAGACGGTATAG TTTTTAATCTTTTTT SeD_A4104 3953198 - 3952185 - | lipopolysaccharide 1,2-glucosyltransferase TERM 5140 3952623 - 3952605 - G 80 -4.6 -5.0925 | opp_overlap 3952605 TGCCAAAAGTAAAAA TGCCTT TTTGGTT AAGGCA TTCTCTTTCCATAAT SeD_A4105 3954229 - 3953216 - | lipopolysaccharide 1,3-galactosyltransferase SeD_A4106 3955314 - 3954235 - | lipopolysaccharide 1,6-galactosyltransferase SeD_A4107 3955593 - 3955384 - | hypothetical protein SeD_A4108 3956446 - 3955649 - | lipopolysaccharide core biosynthesis protein SeD_A4109 3957563 - 3956439 - | lipopolysaccharide core biosynthesis protein RfaG TERM 5141 3956810 - 3956797 - G 78 -2.3 -5.24129 | opp_overlap 3956808, overlap 3956798 CGTCCGGAGAAAAAA TGCAC ATTC GTGCC GACGCCGCTTCTTTC SeD_A4110 3958630 - 3957560 - | putative lipopolysaccharide heptosyltransferase III waaA 3959039 - 3960316 + | 3-deoxy-D-manno-octulosonic-acid transferase coaD 3960325 - 3960804 + | pantetheine-phosphate adenylyltransferase mutM 3961641 - 3960832 - | formamidopyrimidine-DNA glycosylase TERM 5142 3960864 - 3960876 + g 73 -9.1 -3.91352 | opp_overlap 3960856 3960859, overlap 3960862 GGCAATAGAACGTCG CACGC TGT GCGTG TTTCGTTGCGACTAT TERM 5143 3961721 - 3961693 - R 86 -9 -4.38712 | gap 1, opp_overlap 3961694 3961700, overlap 3961700 GGGACGGCCAGAAAA CAAAAAACCCCGC CGAA GCGAGG-TTTTTG TTACATCAAAGCGAG TERM 5144 3961700 - 3961715 + r 82 -6 -5.10461 | opp_overlap 3961693 3961700, overlap 3961694 CCAGAAAACAAAAAA CCCCGC CGAA GCGAGG TTTTTGTTACATCAA TERM 5145 3961715 - 3961700 - R 100 -8.2 -5.86976 | opp_overlap 3961700 3961694, overlap 3961693 CCAGAAAACAAAAAA CCCCGC CGAA GCGAGG TTTTTGTTACATCAA rpmG 3961906 - 3961739 - | ribosomal protein L33 TERM 5146 3961783 - 3961807 + g 72 -3.6 -4.71482 | gap 1, opp_overlap 3961783, overlap 3961776 CGTGCTGACGGACAA CTGGATC-GAA TTTT TTCAGTTCCAG TTTTTCCGGTTTAGT rpmB 3962163 - 3961927 - | ribosomal protein L28 TERM 5147 3962368 - 3962355 - R 72 -6.7 -4.2074 | overlap 3962358 TCCCGAACAGACAAA GATCC CGAT GGATC GCGCAAAGAATCTTA SeD_A4116 3963046 - 3962381 - | DNA repair protein RadC dut 3964420 - 3964878 + | dUTP diphosphatase TERM 5148 3964911 - 3964931 + F 70 -9 -3.33492 | AACGTCATAATACTG CCGCAAGC GCTGA GTTTGCGG TTATAGCGTGGGTGC SeD_A4119 3964986 - 3965582 + | transcriptional regulator domain protein, TetR family TERM 5149 3965652 - 3965631 - T 80 -10.1 -3.93742 | overlap 3965642 GCGACAGAAACATAA GCCCGGTAA AGCG CCACCGGGC AATTCGCTTACACGC pyrE 3966301 - 3965660 - | orotate phosphoribosyltransferase TERM 5150 3966170 - 3966150 - G 76 -5.3 -4.82901 | opp_overlap 3966163 GCTTCGGCATAAAAA CGGCCTAAC AAC GCCAGGTCG CGCCCGGTATTAAAC TERM 5151 3966373 - 3966356 - R 100 -11.3 -5.96219 | TACGGACAAAAAAAA GGCGACT TTTC AGTCGCC TTAAAATCAATTTTC rph 3967096 - 3966380 - | ribonuclease PH TERM 5152 3967945 - 3967927 - g 85 -2.4 -5.45652 | gap 1, overlap 3967929 ATTCTGAAGAAAAAA GA-GGCG GTAGGT CGCCGTC TGGACTTCATGATGC SeD_A4122 3967222 - 3968085 + | conserved hypothetical protein TIGR00255 TERM 5153 3968104 - 3968133 + T 80 -10 -3.93695 | gap 1, opp_overlap 3968101 3968110 TGGCGCTCAATATGT CAC-AGAGCCCGC CTTAT GCGGGCTCTCGCG TTTATCGGTAGTACG TERM 5154 3968126 - 3968110 - T 72 -10.8 -2.91735 | opp_overlap 3968104, overlap 3968101 TCAATATGTCACAGA GCCCGC CTTAT GCGGGC TCTCGCGTTTATCGG SeD_A4123 3969037 - 3968135 - | transcriptional regulator, LysR family TERM 5155 3968262 - 3968224 - G 75 -3.8 -4.8667 | gap 1, overlap 3968226 3968227 GATACTGCATAAAAA TAGCGCCTTCCGCCTGC TCCCCG GCAAGCGGCAGG-ACAA AAAGACCGCGCTTAT TERM 5156 3968841 - 3968810 - G 70 -5.1 -4.50761 | ATTAAGCGAAACAAA CACAGGCGCCA ATTTGTCACG CAGCGCCTGCG CATAAGGCGTAGCAA TERM 5157 3969720 - 3969750 + G 76 -12.6 -2.70932 | opp_overlap 3969719 3969727, overlap 3969725 3969727 AAGACGCTAATTTAC GCAGATAGTCTCGC CAC GCCCGACTATCTGC TGATTAACAACAAAA SeD_A4124 3969111 - 3969992 + | beta-lactamase TERM 5158 3970009 - 3970027 + F 83 -8.8 -4.27465 | opp_overlap 3970001 3970005, overlap 3970007 GAAATAACTCACCGG CGGCGC GTCCAGG GCGCCG TTCTTTTAAATTATC SeD_A4125 3970243 - 3970860 + | inner membrane protein YicG TERM 5159 3970879 - 3970906 + T 83 -9.2 -4.3467 | opp_overlap 3970879, overlap 3970880 CCAAATCCGGGAATA TGCTGAGCAG CCAGCCAT CTGCTCAGCG TTTTGATCTGCGGAT TERM 5160 3970880 - 3970905 + T 74 -10.5 -3.2032 | opp_overlap 3970879, overlap 3970879 CAAATCCGGGAATAT GCTGAGCAG CCAGCCAT CTGCTCAGC GTTTTGATCTGCGGA ligA 3972542 - 3970857 - | NAD-dependent DNA ligase adenylation domain protein TERM 5161 3971655 - 3971681 + g 74 -8.6 -3.92542 | CAGCCAGTCGCCCTG CCCGGGTCGCCA GTA TTGTGACGCGGG TTCTTTAGCCATGCG TERM 5162 3972854 - 3972866 + G 80 -9.1 -4.15044 | opp_overlap 3972854 3972850 GCGCGGGTAAATCCA GCCTG ATT CAGGC TTTATTAAAAACCCA TERM 5163 3973142 - 3973159 + G 85 -2.6 -5.45802 | opp_overlap 3973142 3973140 AAATTCGCGAAAAGA TGCCGC AAGCAC GCAGCA TTTTTATTTTGCCGC gmk 3972799 - 3973422 + | guanylate kinase TERM 5164 3973642 - 3973613 - g 72 -3.5 -4.71401 | gap 1, overlap 3973605 3973616 3973617 AAGAAAACGATAAAA CTACCGTTATCGCG CTG CGCGAAATCGA-AG AAGGTCTGATTAACA rpoZ 3973477 - 3973752 + | DNA-directed RNA polymerase, omega subunit TERM 5165 3974971 - 3974993 + G 84 -9 -4.23758 | overlap 3974972 CGCATTGTCGAACTG CCCGCTGGCG CTA CGCCGGTGGA TTTTGCCTATGCAGT TERM 5166 3974972 - 3974992 + G 81 -12.5 -3.13773 | overlap 3974971 GCATTGTCGAACTGC CCGCTGGCG CTA CGCCGGTGG ATTTTGCCTATGCAG TERM 5167 3975418 - 3975390 - g 83 -7.3 -4.56775 | AGTGGTCGCGAAAAA TCTGCAGCAAGGC GAA GCCGTGGTGCCGA CCGTTGCGCAATCGA SeD_A4129 3973771 - 3975882 + | GTP pyrophosphokinase TERM 5168 3976433 - 3976447 + G 71 -10 -3.59583 | opp_overlap 3976433 TTGCCGGAAGATGAA CAGCAG CGC CTGCTG TTTGAGGGTGGTTAT TERM 5169 3976447 - 3976433 - g 70 -10 -3.36273 | opp_overlap 3976433 TTGCCGGAAGATGAA CAGCAG CGC CTGCTG TTTGAGGGTGGTTAT trmH 3975887 - 3976576 + | tRNA guanosine-2'-O-methyltransferase TERM 5170 3977411 - 3977386 - g 74 -10.3 -3.53012 | overlap 3977387 TCGTTGCCGTTTAAA CCCACCAGCGC ACAG GCGCGGGTGGT AGCAGAGATCGAACG TERM 5171 3977410 - 3977387 - g 79 -13.8 -2.71712 | overlap 3977386 CGTTGCCGTTTAAAC CCACCAGCGC ACAG GCGCGGGTGG TAGCAGAGATCGAAC recG 3976582 - 3978663 + | ATP-dependent DNA helicase RecG gltS 3979904 - 3978699 - | sodium/glutamate symporter TERM 5172 3978786 - 3978768 - G 70 -6.6 -4.10188 | overlap 3978769 GATATCGATAAAGAA CGCGCCGA CCA TCGGCACC ACCAGGAACGCCATA TERM 5173 3980553 - 3980567 + G 71 -7.8 -3.9398 | TGATGCTGGCAAGCT GCACCG AGA TGGTGC TTTCTCGCATTCTAC TERM 5174 3981021 - 3980988 - g 75 -12.5 -2.62184 | CGTCGCTGGAGACCA TCGGAGACATCACCG CCAC CTCTGATGTCTCCGA GCAGCCGGTATCCGG SeD_A4133 3980132 - 3981523 + | uracil-xanthine permease TERM 5175 3981560 - 3981527 - f 78 -5.8 -4.7657 | opp_overlap 3981534, overlap 3981528 3981529 GAAAAACCGTAAAAA CCCTGCGGCGGCGA CACGAT TCGCCGCTGCTGTA ACGCTCTTTCACCAT TERM 5176 3981558 - 3981529 - f 71 -10.6 -2.64962 | opp_overlap 3981534, overlap 3981528 3981527 AAAACCGTAAAAACC CTGCGGCGGCGA CACGAT TCGCCGCTGCTG TAACGCTCTTTCACC TERM 5177 3981534 - 3981553 + F 71 -10.7 -2.63479 | opp_overlap 3981529 3981528 3981527 CGTAAAAACCCTGCG GCGGCGA CACGAT TCGCCGC TGCTGTAACGCTCTT TERM 5178 3982814 - 3982785 - g 81 -12.9 -3.02511 | overlap 3982804 CCGACTGGTTGAACA GCCTGACGCTGAA AAAA TTCAGCGCCAGCC GCAATCTGGTGATCG SeD_A4134 3981644 - 3983353 + | AsmA family protein SeD_A4135 3985774 - 3983456 - | alpha-xylosidase SeD_A4139 3987659 - 3987784 + | hypothetical protein SeD_A4140 3988210 - 3987866 - | putative cytoplasmic protein TERM 5179 3988418 - 3988431 + H 78 -6.7 -4.65916 | AAGAGATTATTTACA GCGAT GATT ATCGC TTTTATTACCGTCAC TERM 5180 3990842 - 3990813 - g 71 -5.9 -4.28361 | gap 1, overlap 3990818 CGAACTTGAGCAAAA CGCAACCTGTAAGT CTT ACTTACAAGTT-CA ACAGGAAGGTAGCCG TERM 5181 3991078 - 3991105 + G 73 -6.2 -4.42806 | opp_overlap 3991064, overlap 3991080 ATGCTGGAGCGTATC CGCGATATTCGC GCCA GCGAACGTCGGG TTTATTTGCGGGTAC SeD_A4145 3990607 - 3991644 + | virulence protein SeD_A4146 3991929 - 3991756 - | ISxac3 transposase TERM 5182 3992153 - 3992172 + H 74 -8.6 -3.89822 | opp_overlap 3992153 3992151 ATGAATGGTTAAAGA TATCTGCC AGGA GGCGGATA TTTGTGAAGTGACTG SeD_A4147 3992943 - 3993560 + | RmbA TERM 5183 3994307 - 3994285 - T 72 -4.8 -4.58395 | overlap 3994287 GTCACGTGCCAAAAA TACGATTGTC GTC GGCAATCGTG CGCATATTGTTACTA TERM 5184 3994305 - 3994287 - T 71 -7.4 -3.90762 | overlap 3994285 CACGTGCCAAAAATA CGATTGTC GTC GGCAATCG TGCGCATATTGTTAC TERM 5185 3995301 - 3995287 - T 78 -5.7 -4.84529 | opp_overlap 3995286 GCAGAAAGGTAAAAA CTGGT ATCTG ACCAG CTACATTGAGCCGGA TERM 5186 3996541 - 3996515 - T 76 -9.4 -3.68569 | opp_overlap 3996519, overlap 3996517 3996519 TGATTCAGGTAACAA CAGAGCCGCTGA TCT TCAGCGGCTTTT ACCCGGAAGCGCTTT TERM 5187 3996539 - 3996517 - T 82 -12 -3.42256 | opp_overlap 3996519, overlap 3996515 3996519 ATTCAGGTAACAACA GAGCCGCTGA TCT TCAGCGGCTT TTACCCGGAAGCGCT TERM 5188 3996519 - 3996537 + T 100 -14.6 -4.07568 | opp_overlap 3996519 3996517 3996515 TCAGGTAACAACAGA GCCGCTGA TCT TCAGCGGC TTTTACCCGGAAGCG TERM 5189 3996537 - 3996519 - T 90 -14.6 -3.27902 | opp_overlap 3996519, overlap 3996517 3996515 TCAGGTAACAACAGA GCCGCTGA TCT TCAGCGGC TTTTACCCGGAAGCG TERM 5190 3996633 - 3996615 - T 76 -4.5 -4.9725 | overlap 3996617 ATGTGTACAGAAAAA TATCGGG CGTTT CCCGATG GTGAACATAAAGCCA TERM 5191 3996631 - 3996617 - T 71 -7.1 -4.11141 | overlap 3996615 GTGTACAGAAAAATA TCGGG CGTTT CCCGA TGGTGAACATAAAGC SeD_A4149 3997079 - 3996597 - | putative inner membrane protein TERM 5192 3996655 - 3996645 - G 70 -6.8 -4.19624 | GATGGTGAACATAAA GCCA CGA TGGC CCTGAGTCAGGATGG TERM 5193 3997255 - 3997265 + r 72 -8.2 -3.77177 | opp_overlap 3997255 CTTATAGCTTGCAAA GCGG CTG CCGC TTTCGATATCTTCAT SeD_A4152 3998610 - 3998497 - | hypothetical protein TERM 5194 3998685 - 3998669 - H 70 -9.5 -3.08015 | overlap 3998658 TTAATGACTTTAACA CTGATAG TGA CTATCAG TGAAAGGCAACAACA SeD_A4153 3998712 - 3999392 + | SlsA TERM 5195 3999435 - 3999415 - T 93 -14.1 -3.57561 | opp_overlap 3999415 CCTGAAGCGGCTAAA TAGCCCCAT TTA ATGGGGCTA TTTTACTTGCCATTT TERM 5196 3999415 - 3999435 + T 100 -14.1 -4.43911 | opp_overlap 3999415 CCTGAAGCGGCTAAA TAGCCCCAT TTA ATGGGGCTA TTTTACTTGCCATTT SeD_A4154 4000087 - 3999560 - | putative inner membrane protein mgtA 4003080 - 4000354 - | magnesium-translocating P-type ATPase TERM 5197 4002622 - 4002637 + g 73 -5.4 -4.57837 | opp_overlap 4002613, overlap 4002605 ACGCAACACCGTGGC GGTGGT GCGA ACCATC TTTTTCAGCGCCTGT TERM 5198 4003203 - 4003220 + G 79 -3.4 -5.18371 | AAAGGTTATTGCTTA CTCACT ATTTTG AGTGGG TTTTATTTTATCGAC SeD_A4156 4003179 - 4003292 + | hypothetical protein SeD_A4157 4003977 - 4003300 - | protein MgtC TERM 5199 4003871 - 4003851 - G 100 -8.2 -5.19328 | opp_overlap 4003856, overlap 4003852 AGCTCAGAATAAAAA CGGCGGCG CCTGT CGCCACCA GCGCATTAGTGCGTA TERM 5200 4003870 - 4003852 - G 74 -9.5 -3.70512 | opp_overlap 4003856, overlap 4003851 GCTCAGAATAAAAAC GGCGGCG CCTGT CGCCACC AGCGCATTAGTGCGT SeD_A4158 4004459 - 4005406 + | carboxylate/amino acid/amine transporter SeD_A4159 4006390 - 4005449 - | hypothetical protein TERM 5201 4006551 - 4006609 + r 75 -11 -3.03243 | opp_overlap 4006551 4006602 CATTATCGCCCAATA GCGTAACGCTAACCGGGCCTACAAAT ACACGTC ATCTGTAGGCCAGGTAAACGTAGCGC TCTTCGGCGATAAAT TERM 5202 4006609 - 4006551 - R 85 -13.9 -3.03441 | opp_overlap 4006551, overlap 4006602 CATTATCGCCCAATA GCGTAACGCTAACCGGGCCTACAAATA CACGT CATCTGTAGGCCAGGTAAACGTAGCGC TCTTCGGCGATAAAT SeD_A4160 4007369 - 4006626 - | 2-dehydro-3-deoxyphosphogluconate aldolase TERM 5203 4007122 - 4007138 + g 71 -7.9 -3.99324 | GCCGGGTGAGTATGG GCGGCAA TCA TCGCCGC TTTGTAGTACTGCGC SeD_A4161 4008465 - 4007356 - | putative pyridoxal phosphate-dependent enzyme TERM 5204 4008400 - 4008427 + g 73 -5.6 -4.56775 | gap 1, opp_overlap 4008400, overlap 4008391 TGAGACGCCCAGAAT GGTCATT-TTGCC GCA GGCGTTAATGACC TTTTTCAACCCCAGT SeD_A4162 4009329 - 4008469 - | PTS system mannose/fructose/sorbose family IID component TERM 5205 4009015 - 4009025 + g 87 -2.4 -5.64873 | opp_overlap 4009000, overlap 4009014 CGAGTCGTTAATCGG CTCG CCG CGCG TTTTTTGTTCTTCCA SeD_A4163 4010075 - 4009326 - | PTS system sorbose-specific iic component SeD_A4164 4010706 - 4010221 - | PTS system sorbose subfamily IIB component TERM 5206 4010368 - 4010358 - G 87 -8.2 -4.62302 | opp_overlap 4010358, overlap 4010360 TAATATTCTGAAAAA CCGC TTT GCGG TTTGGCCCGCCGCCG SeD_A4165 4011142 - 4010717 - | PTS system fructose IIA component TERM 5207 4011353 - 4011327 - H 73 -11.5 -2.5638 | overlap 4011326 4011325 GAGGAAGAAGAAAGG TCTGGCGAGGC GCGAA GCCCCGCCAGT AAAAGGATTAGCTAT TERM 5208 4011716 - 4011706 - H 74 -8.2 -3.86015 | overlap 4011707 TAGCGCGCTGATAAA GCGC ATC GCGC TGCGCTCCATCTCCA TERM 5209 4011833 - 4011823 - H 77 -6.8 -4.46112 | overlap 4011830 4011831 TTCCAGCGAAATAAA CGGA ATA TCCG GCAGCCCCGGCTGGA TERM 5210 4012450 - 4012437 - H 71 -9.5 -3.13504 | overlap 4012435 4012434 GGGCGATCAAAATGA CCCCG CAGT CGGGG CTGGCATCGATGCGC TERM 5211 4012840 - 4012861 + H 75 -10.1 -3.59979 | overlap 4012827 4012826 4012824 ATGCGGGCAGCGTGC GCGCGTCTA TATT TAGCCGCGC TTTACCGTCAAACAG TERM 5212 4013534 - 4013507 - H 73 -10.5 -2.94144 | opp_overlap 4013507 4013522, overlap 4013504 4013509 CGCGCAGTTAAAGTA GACCAGCGGCG GGATAG CGCCGCTCGCC TGTTCACAGGCGAAA TERM 5213 4013532 - 4013509 - H 70 -9.5 -3.02324 | opp_overlap 4013507 4013522, overlap 4013507 4013504 CGCAGTTAAAGTAGA CCAGCGGCG GGATAG CGCCGCTCG CCTGTTCACAGGCGA SeD_A4169 4014213 - 4014506 + | hypothetical protein SeD_A4170 4014491 - 4014634 + | hypothetical protein TERM 5214 4015966 - 4015948 - g 84 -3 -5.42259 | GCACGGTGAAAAAAA GCGGAGAA TGG TTTGCCGC CACCGCAGAGCATAA SeD_A4171 4014612 - 4015994 + | beta-glucosidase TERM 5215 4016764 - 4016754 - f 70 -2.4 -5.02476 | overlap 4016756 ATACCGCCCAAAAAA CTGC CCA GCGG CGCGGCGATCACTAA TERM 5216 4017427 - 4017407 - f 72 -4.7 -4.67038 | opp_overlap 4017418, overlap 4017408 4017414 4017416 4017418 CGTGTAAAACCAAAA GGTAAGACA TAG TGTATCACC TGGTGCTACACTTTA TERM 5217 4017418 - 4017438 + F 72 -8.3 -3.75332 | opp_overlap 4017407 4017416 4017414 4017408 4017418 AAAAGGTAAGACATA GTGTATCAC CTG GTGCTACAC TTTAGATTACAGGAT SeD_A4173 4017418 - 4017822 + | putative cytoplasmic protein TERM 5218 4017844 - 4017824 - g 84 -9.1 -4.35327 | TCAGCAAAAACTAAA TTCAAAAGC CCT GCCTTTGAA GCGATTCATAGCGCG SeD_A4174 4017806 - 4018129 + | DNA-binding protein TERM 5219 4018364 - 4018331 - T 72 -8.2 -3.68435 | opp_overlap 4018331, overlap 4018329 4018334 4018336 GTGTTCAAAACAAGA TCACATTTCCGTGA TATATG TCACGGAAATGAGG AGCTACAAGTCTCTG TERM 5220 4018361 - 4018334 - T 82 -12.9 -2.94356 | opp_overlap 4018331, overlap 4018331 4018329 4018336 TTCAAAACAAGATCA CATTTCCGTGA TATATG TCACGGAAATG AGGAGCTACAAGTCT TERM 5221 4018359 - 4018336 - T 70 -9.7 -3.01217 | opp_overlap 4018331, overlap 4018334 4018331 4018329 CAAAACAAGATCACA TTTCCGTGA TATATG TCACGGAAA TGAGGAGCTACAAGT SeD_A4175 4019014 - 4018562 - | hypothetical protein TERM 5222 4018699 - 4018714 + g 83 -7.5 -4.56597 | GCGTATCGGTGATCG GCGCG GCTAAA CGCGC TTTTTGCAGCAACCG TERM 5223 4019183 - 4019165 - R 100 -13.1 -5.31456 | overlap 4019154 4019149 GCAAGGCATAAAAAA GCCCGGC GTTAA GCCGGGC AAAACGTTACCAAAT uhpT 4020598 - 4019207 - | hexose phosphate transport protein TERM 5224 4019432 - 4019452 + g 76 -3.1 -5.08824 | opp_overlap 4019415, overlap 4019433 GAAGGTTCCTTTGAT ACCGTCCGC AGC GCCGATGGC TTTTTTCGGTACGAA uhpC 4022069 - 4020741 - | regulatory protein UhpC TERM 5225 4021031 - 4021021 - G 70 -6.8 -4.15044 | CCGGTGGTGAAGAAA CAGG CCG CCTG CATCACGTAGCTGGC TERM 5226 4021653 - 4021599 - G 74 -11.3 -3.28712 | gap 1 CGCGGTGTTCCATAA CGCCCACCAGCCGCCGCGCTCGGTAC GCGA GTACCAGGCG-GTCAGCAAACGGGCG CAAACCGGCGATCCA TERM 5227 4021695 - 4021683 - G 75 -6.2 -4.58685 | AAACCCCTGGAAAAA GGCG TTCAG CGCC CATAGCAGAGCAAAG TERM 5228 4021806 - 4021783 - G 75 -6.7 -4.38712 | CCGATGCCCATAAAA TAGCGAGCG TTAGAG CGATCGCTA ACGATGCCGGAGACA uhpB 4023581 - 4022079 - | sensor histidine kinase UhpB uhpA 4024171 - 4023581 - | transcriptional regulatory protein UhpA TERM 5229 4024223 - 4024199 - R 100 -12.2 -5.96219 | GATGGATAAAAAAAA CGCGCTTACC TTAAC GATAAGCGCG CGGCTGTTCAAGCCT SeD_A4180 4025259 - 4024246 - | DeoX TERM 5230 4025274 - 4025306 + r 73 -7.6 -4.05788 | TGGTTGATCTCCTCA GGACGCGGCGACTT CAGCC AGGTTGCCGCGCAC TTTGCTTTCGCGCCA fucP 4026587 - 4025271 - | L-fucose:H+ symporter permease TERM 5231 4025868 - 4025879 + g 71 -7.2 -3.92075 | overlap 4025867 4025870 GCGTAACGTATCCAG CGCC GAGG GGCG TTTATGACTCGCGGT TERM 5232 4026329 - 4026343 + g 89 -2.8 -5.52384 | GACCGATAAGTATCG CCACTT TAT AACTGG TTTTTTTAATGACCA TERM 5233 4026540 - 4026573 + g 77 -3.9 -4.99861 | gap 1, opp_overlap 4026535, overlap 4026541 4026560 4026569 CTGGAACAGAGGTGT C-TTATTCAGATACCC GTC GGGCATCTGAACGATG TTTTTATCGTTCATA TERM 5234 4026541 - 4026571 + g 74 -7.6 -4.11322 | opp_overlap 4026535, overlap 4026540 4026560 4026569 TGGAACAGAGGTGTC TTATTCAGATACCC GTC GGGCATCTGAACGA TGTTTTTATCGTTCA rbsK 4027538 - 4026618 - | ribokinase TERM 5235 4026678 - 4026716 + g 81 -3.6 -5.14563 | opp_overlap 4026669 ATAAGAGGATTGGGT GCCTTTCCCGGTGACGCT GAA AGCGGCAAAGAGGACGGC TTTTTTCATGGCGGC TERM 5236 4027267 - 4027253 - G 74 -7 -4.25104 | overlap 4027254 TGGCGTTGACGAAAA TCGGCG CTA CGCCGC TGCTGGTACACGGTA TERM 5237 4027273 - 4027283 + g 80 -5.4 -4.88067 | GCTACGCCGCTGCTG GTAC ACG GTAC TTTTTCTACATACGT TERM 5238 4027597 - 4027582 - H 70 -4.8 -4.39889 | ACAATGATATTAAAA TAACAT TACC ATGTTA CTTCCGTATCATTTG TERM 5239 4028377 - 4028407 + G 74 -7.6 -4.14243 | opp_overlap 4028377 TCAATCCGCGCAAAG TGTTTATTTCCGCC AGC GGCGTACATGAACA TTTTGGCGTGAGCTG SeD_A4183 4027863 - 4028648 + | deoxyribose operon repressor ilvN 4028940 - 4028650 - | acetolactate synthase, isozyme I, small subunit ilvB 4030632 - 4028944 - | acetolactate synthase, large subunit, biosynthetic type TERM 5240 4030688 - 4030712 + H 89 -11.4 -4.16279 | gap 1, opp_overlap 4030688 GTCTTAAACAAAAAA CCCCGCCCGGT TTGC GCCG-GCGGGG TTTTGGAATCGTGTG TERM 5241 4030712 - 4030688 - H 100 -10.7 -5.63517 | gap 1, opp_overlap 4030688 GTCTTAAACAAAAAA CCCCGCCCGG TTTGCG CCG-GCGGGG TTTTGGAATCGTGTG TERM 5242 4030783 - 4030800 + H 72 -8.4 -3.7282 | CACGCACGACGACCA CTGCGC GAGATG GCGCAG TTGTTAGTAGGGTCG TERM 5243 4031066 - 4031051 - H 100 -10.4 -5.79595 | opp_overlap 4031051 CCGGAAAACAAAAAA CCTCGC CGAA GCGAGG TTCTTACAGCGTAAT TERM 5244 4031051 - 4031066 + H 79 -10.4 -3.62775 | opp_overlap 4031051 CCGGAAAACAAAAAA CCTCGC CGAA GCGAGG TTCTTACAGCGTAAT TERM 5245 4031151 - 4031132 - H 80 -12.2 -2.99188 | opp_overlap 4031130 4031129 4031147 4031148, overlap 4031127 4031121 4031148 AACAGCAGAAGTATA CGCGTTCT GTGC AGAACGCG CAATTTCGGCGCGAA TERM 5246 4031604 - 4031583 - H 100 -17.3 -3.06831 | opp_overlap 4031583, overlap 4031572 TCAAGCCGCACCGAA GGGGAGCGG GCAA CCGCTCCCC TTTCACCTTATCCGC TERM 5247 4031583 - 4031604 + H 100 -17.3 -3.69354 | opp_overlap 4031572 4031583 TCAAGCCGCACCGAA GGGGAGCGG GCAA CCGCTCCCC TTTCACCTTATCCGC TERM 5248 4032479 - 4032493 + G 77 -7.8 -4.3014 | TGGCGGCTGGCGGGA TTGCCC TCG GGGCGA TTTTACTCCGTCTGT SeD_A4186 4031680 - 4032513 + | integral membrane protein TERM 5249 4032547 - 4032566 + F 88 -7.8 -4.92385 | opp_overlap 4032527, overlap 4032548 AGACGTAACACATTC TCGGCAAC ATTT GTTGCCGC TTTTGTTTACATATC TERM 5250 4032548 - 4032565 + F 82 -11.3 -3.54346 | opp_overlap 4032527, overlap 4032547 GACGTAACACATTCT CGGCAAC ATTT GTTGCCG CTTTTGTTTACATAT TERM 5251 4033337 - 4033320 - g 70 -5.5 -4.42386 | opp_overlap 4033319 TCGCCAGCTATAAAA CGCTGTT TGGT AACGGCG CATTTAACTGTTACC TERM 5252 4033629 - 4033639 + G 74 -2.4 -5.06414 | GGACGCTACTCATCC CCGC TGC GCTG TTTTTCTTCGGCGCC emrD 4032716 - 4033900 + | multidrug resistance protein D TERM 5253 4033910 - 4033930 + T 100 -16.1 -3.66178 | GTTTAACGTTTCCCT CGCCCGGCG TTT TGCCGGGCG TTTCACATTCCGGCG TERM 5254 4034027 - 4034045 + T 72 -3.1 -5.0538 | overlap 4034028 GAGTGTCCGCGTTTA TCGCATA CGGAA TATGCGC TTTTTTCAGCTCGCA TERM 5255 4034179 - 4034204 + T 72 -5.3 -4.56775 | overlap 4034162 TGCCAGCGAACCGCA GCGTTGATCCG TGCC CGAATCGCCGC TTTTTCCGCCGCCGT TERM 5256 4034284 - 4034302 + T 72 -8.8 -3.53343 | overlap 4034296 AAGATGTGCCACTCC GCCAGTAC ATA GTTCTGGC TTTGCGCCGGCAGTT dsdC 4035914 - 4034976 - | D-serine deaminase transcriptional activator TERM 5257 4035220 - 4035203 - G 74 -11.3 -3.19936 | opp_overlap 4035202 4035201 AACGATCGAAGCCAA TGCCGGA TGAA TCCGGCA AATTTACTGCAAAAT TERM 5258 4035563 - 4035528 - G 77 -11 -3.57971 | overlap 4035529 ATAGCGACGGGTAAA GTCCCCCAGCGCAGGC ACCA GCCAGCACTGGGCGAT AGAGGGACGTGAATA TERM 5259 4035562 - 4035529 - G 83 -14.5 -2.74461 | overlap 4035528 TAGCGACGGGTAAAG TCCCCCAGCGCAGGC ACCA GCCAGCACTGGGCGA TAGAGGGACGTGAAT TERM 5260 4036215 - 4036234 + G 75 -6.4 -4.55295 | AAATTCCACCCCTTC CTGGCG TTACTGCT CGCCAG TTTCTTTGTCGGCGC TERM 5261 4036812 - 4036793 - g 70 -7 -4.07687 | opp_overlap 4036801 AGTGCGCGCCGAAAA CACCCTGC CGTC GCTGGGCG CAACGCTGTTTACCG SeD_A4189 4036125 - 4037462 + | DsdX permease TERM 5262 4037645 - 4037671 + G 71 -9.5 -3.53012 | gap 1, opp_overlap 4037669, overlap 4037626 4037640 CATGACCGTCTGGCG CGCTTTGCGCCG TATC TGGCG-AAAGCG TTTCCGCAAACCGCC TERM 5263 4037808 - 4037795 - g 81 -2.3 -5.40474 | ATGCTGTTAAAAAAA GACAG TCAC CTGGC AATCTCTGGTTCCAT dsdA 4037480 - 4038802 + | D-serine ammonia-lyase TERM 5264 4038865 - 4038825 - T 82 -11.9 -3.35046 | gap 1, opp_overlap 4038826 4038826, overlap 4038823 4038826 TCAGTGCCGGAAAGA CGGCAGCGCCATCCGGCA CGCCAT CGCCTGATGGCGCTAC-G CTTATCAGGCCTGTG TERM 5265 4038826 - 4038866 + T 70 -9 -3.30771 | gap 1, opp_overlap 4038823 4038825 4038826, overlap 4038826 CAGTGCCGGAAAGAC G-GCAGCGCCATCCGGC ACGCCATC GCCTGATGGCGCTACGC TTATCAGGCCTGTGA TERM 5266 4038865 - 4038826 - T 76 -12.1 -2.60813 | opp_overlap 4038826 4038826, overlap 4038823 4038825 CAGTGCCGGAAAGAC GGCAGCGCCATCCGGCA CGCCAT CGCCTGATGGCGCTACG CTTATCAGGCCTGTG SeD_A4191 4039414 - 4038884 - | f165 TERM 5267 4038989 - 4038977 - G 76 -3.3 -5.1101 | GGAGTAGTTAAAAAA GGTCT GGT AGCCC TCGCAAAGCTGATTT SeD_A4192 4039773 - 4039411 - | inner membrane protein YidG TERM 5268 4039547 - 4039535 - G 71 -4.8 -4.57569 | TGAGTTTCGGAAAAA TCGC TATGC GCGA CATCCATCAAATTAC SeD_A4194 4040110 - 4039763 - | inner membrane protein YidH SeD_A4193 4040109 - 4040222 + | hypothetical protein SeD_A4195 4040523 - 4040230 - | hypothetical protein TERM 5269 4040596 - 4040573 - R 72 -3.2 -5.02074 | gap 1, overlap 4040577 CCATTCCCCAAAAAA TCACCGCCA GCAGTTG TGGC-GTGA TAATACGCAGGAACA SeD_A4196 4042214 - 4040553 - | putative potassium uptake protein TrkA TERM 5270 4041093 - 4041119 + g 70 -2.9 -4.73388 | overlap 4041095 TCCGATGCCGATAAA CACCGGCAG CATCTGCAC CTGCTGGAG TTTTTGCTGCGCGTT TERM 5271 4042387 - 4042366 - R 100 -17.3 -5.24129 | TCGTGGCACAAAAAA GCCCCGCCA TCTC TGGCGGGGC AAGGCAAGGAGCTCA ibpB 4042831 - 4042403 - | small heat shock protein IbpB TERM 5272 4042694 - 4042713 + g 79 -2.8 -5.17054 | overlap 4042693 4042695 TAACGCTAAGGTAAT GCGATAAT GGTT ATCGTCGC TTTTTTCGATGTTAT TERM 5273 4042840 - 4042857 + r 76 -4.9 -4.74103 | gap 1 TACGCATAATCATTT CTC-CTTC TAA GAAGCGAG TTTTTACCTTCACAC TERM 5274 4042932 - 4042916 - R 74 -11.5 -2.80113 | GAGCATGGGATGACA GGCCGCG CAA CGCGACC CGACGGAATCAGTTA ibpA 4043360 - 4042941 - | small heat shock protein IbpA SeD_A4200 4043737 - 4043618 - | hypothetical protein SeD_A4199 4043706 - 4043996 + | conserved outer membrane protein TERM 5275 4044007 - 4044036 + Tr 100 -15.1 -3.6707 | CCTGATTTATCGCCC GGTTTCCGTCACC CATA GCTGACGGAAACC TTTCACCTCTTCCAT SeD_A4201 4045224 - 4043998 - | putative ATP/GTP-binding protein TERM 5276 4044098 - 4044084 - G 76 -3.4 -5.0133 | opp_overlap 4044092 4044093, overlap 4044087 CATCCGGTGAAAAAA CGACGG CGT CCGCAG ACGGCGGGTTGTCGT TERM 5277 4044337 - 4044322 - G 78 -6.1 -4.72272 | GTCCCGCATCAAAAA GGCGA TCGCCG TCGCC TGCGGATTACTGCGA TERM 5278 4044439 - 4044411 - G 71 -10.9 -3.30701 | overlap 4044413 GGTGAGTAAAGGTAA GACGCCGCTGAAC TAC GCCCAACGGCGGC GATGGCATCGTTGAT TERM 5279 4044437 - 4044413 - G 78 -12.1 -3.21807 | overlap 4044411 TGAGTAAAGGTAAGA CGCCGCTGAAC TAC GCCCAACGGCG GCGATGGCATCGTTG TERM 5280 4045310 - 4045345 + r 73 -7.6 -4.11183 | overlap 4045307 TCGTTGGGATAGCCA GGCCC-GATGGCGCCG CGCCAC CGG-GCCGTCAGGGTC TTATTTCTCCTGCGC SeD_A4202 4046389 - 4045346 - | cytochrome c-type biogenesis protein H2 TERM 5281 4045598 - 4045613 + g 75 -6.1 -4.56597 | CGCCTCCGCGTAGCC CAGCG CCGCAT CGCTG TTTTTCGGGGCCAGA TERM 5282 4046006 - 4045960 - G 100 -15.6 -3.53012 | opp_overlap 4045979, overlap 4045934 CGCGCGCGCCGCAAA CCGGGGTGTCCGCCGGCAGCGG TTC CCGGCGCAGGCGCACCCGCCGG CGCGTGCGGGCAACG SeD_A4203 4046943 - 4046386 - | thiol:disulfide interChange protein DsbE ccmF 4048871 - 4046940 - | cytochrome c-type biogenesis protein CcmF SeD_A4205 4049368 - 4048868 - | ABC family protein ccmD 4049538 - 4049365 - | heme exporter protein CcmD TERM 5283 4049535 - 4049524 - G 100 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TACC CGCC CATGGCGAAAAAATC TERM 5284 4049559 - 4049549 - R 72 -3.2 -5.03314 | CCCATGGCGAAAAAA TCGC TCC ACGA TGAAAATGCCGGACT SeD_A4207 4050320 - 4049574 - | ABC family protein ccmB 4051022 - 4050363 - | heme exporter protein CcmB ccmA 4051645 - 4051019 - | heme ABC exporter, ATP-binding protein CcmA TERM 5285 4051366 - 4051349 - G 71 -4.7 -4.56597 | opp_overlap 4051359, overlap 4051351 GCCGGGGTGGAAAAA GTGCAGG TTCT CCCGCGC CGTCAGGCGGGATTT TERM 5286 4051473 - 4051515 + g 75 -6 -4.56775 | opp_overlap 4051465 CAGTACACCTCCCCG CCGTCCGGGCGCGCCAGC CCGGTCA GCAGGCGCAGCAGGGTGG TTTTTCCGGCGCCGT SeD_A4210 4053042 - 4051642 - | cytoChrome-c peroxidase TERM 5287 4052030 - 4052044 + g 74 -7.1 -4.3467 | TAACCGTGTTTCTGT TGCGC GGTCA GCGCA TTTTCATCTCCACGT TERM 5288 4052086 - 4052096 + g 82 -5.4 -5.09426 | AAAGGCGGAATCCGG CGTT ATC AACG TTTTTTCAAATTCGG SeD_A4211 4053864 - 4053232 - | chaperone protein TorD TERM 5289 4053737 - 4053759 + g 86 -14.9 -2.94293 | overlap 4053705 4053704 4053734 4053739 TTTAACAGCGCCAGC CAGTCCGCG ATTTC CGCGGACTG TAATTGTATTAACCC TERM 5290 4053739 - 4053757 + g 76 -11.7 -3.02147 | overlap 4053705 4053704 4053737 4053734 TAACAGCGCCAGCCA GTCCGCG ATTTC CGCGGAC TGTAATTGTATTAAC torA 4056409 - 4053857 - | trimethylamine-N-oxide reductase TorA TERM 5291 4054183 - 4054232 + g 91 -14.3 -3.14132 | gap 1, opp_overlap 4054183 CGCGTGCATTGAATA CCCGCACGATGTCACCGT-TGCGG ATC CCGCGCGCGCTGGCATCCTGTGGG TTAATAAAGACCGGC TERM 5292 4055687 - 4055705 + g 71 -4.5 -4.61231 | ATCGTGATCCGGGCA CCACCAG TTTGC CTGCTGG TTTTTCACCATATCA TERM 5293 4056382 - 4056398 + g 71 -4.3 -4.56187 | opp_overlap 4056372 4056383 4056385, overlap 4056383 GAAAACGTCGACGAG AGACGTG TAG CGCGTCC TTATTTTTCATTGTG torC 4057583 - 4056399 - | trimethylamine-N-oxide reductase c-type cytochrome TorC SeD_A4214 4057677 - 4058405 + | TorCAD operon transcriptional regulatory protein TorR torT 4059418 - 4058378 - | tmao reductase system periplasmic protein tort TERM 5294 4059352 - 4059363 + g 71 -7.2 -3.97368 | GTAGCAGTCCGGTTT CGGC TGAC GCCG TTTCTACATTCGAGA SeD_A4217 4059559 - 4059443 - | hypothetical protein TERM 5295 4060317 - 4060301 - gR 76 -5.1 -4.77173 | overlap 4060304 GCTGGAGAAAATAAA CCAGTAC ACC ACACTGG TTACCCTGTTTCGTA TERM 5296 4061226 - 4061249 + Gr 74 -7.4 -4.08767 | gap 1, opp_overlap 4061238 GCGAAATTTACCGAT CGCG-GCAGCA TAG TGCTGCGCACG TTTTGCGACGATCAG TERM 5297 4062117 - 4062085 - gR 84 -6.1 -5.04601 | overlap 4062086 4062087 CGCATAAATTAAAAA GCGGCTGCGCCAGCC TGG GGATGACGCAGGCAA CCGAAGCCTGTCGGG TERM 5298 4062116 - 4062086 - gR 75 -9.6 -3.61676 | overlap 4062085 4062087 GCATAAATTAAAAAG CGGCTGCGCCAGCC TGG GGATGACGCAGGCA ACCGAAGCCTGTCGG TERM 5299 4062115 - 4062087 - gR 74 -10.9 -2.75921 | overlap 4062086 4062085 CATAAATTAAAAAGC GGCTGCGCCAGCC TGG GGATGACGCAGGC AACCGAAGCCTGTCG torS 4059546 - 4062233 + | tmao reductase system sensor tors SeD_A4218 4063557 - 4062259 - | d-galactonate transporter TERM 5300 4062602 - 4062633 + g 77 -3.6 -5.03747 | gap 1, opp_overlap 4062585 4062601 AAACCGCAAATAATC GGCGTTTTGC-GCGC CAC GCCCAGCGAGAAGCC TTTTTTCACCAGTTT TERM 5301 4063639 - 4063655 + r 70 -10.1 -3.09784 | opp_overlap 4063636, overlap 4063638 TTATATTTAAATTGG GTTGCCC GGA GGGCGAC GTTTGTTGAGCCTAC SeD_A4219 4064829 - 4063681 - | galactonate dehydratase SeD_A4220 4065443 - 4064826 - | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase TERM 5302 4065017 - 4064993 - G 70 -9.9 -3.38046 | opp_overlap 4064993, overlap 4064952 4064991 4065014 CGCCGACGGCAAATA GCGGAACATCC GGC GGAAGTACCGC TTTCAGCGCGCTGAT TERM 5303 4064993 - 4065017 + g 71 -9.9 -3.5393 | opp_overlap 4064952 4064993 4064991 4065014 CGCCGACGGCAAATA GCGGAACATCC GGC GGAAGTACCGC TTTCAGCGCGCTGAT SeD_A4221 4066305 - 4065427 - | 2-dehydro-3-deoxygalactonokinase TERM 5304 4066123 - 4066149 + g 71 -10.8 -3.29558 | overlap 4066120 4066138 CATGCCCGCCATTAT CACTGGGGTGGC GCT GTCGCGCCAGTG TGTTGTGACTTCTGC TERM 5305 4066192 - 4066208 + g 72 -12.3 -2.7127 | overlap 4066191 4066194 AGGAGATTTACCGTT CAGGCGT GTA ACGCCTG CTTCTGATTGCCTGC TERM 5306 4066217 - 4066233 + g 71 -8 -3.88291 | overlap 4066220 ACGCCTGCTTCTGAT TGCCTG CTCTC CAGGCA TTTGTCGCCCTGGTA dgoR 4066991 - 4066302 - | galactonate operon transcriptional repressor TERM 5307 4066474 - 4066494 + g 74 -9.8 -3.76373 | opp_overlap 4066466 4066464 TCAAATACCGCTCGC TGTAGCGA GCTGA TCGCTACA TTTAACTGTTGCAGC TERM 5308 4067100 - 4067131 + r 72 -8.9 -3.64703 | opp_overlap 4067101, overlap 4067101 GTTACCATGCCATCA ATGTAGTACAACA CAATTA TGTTGTACTACAA TTTAGATCACAAAAA TERM 5309 4067130 - 4067101 - R 83 -13.1 -3.17212 | opp_overlap 4067100 4067101 TTACCATGCCATCAA TGTAGTACAACAC AATT ATGTTGTACTACA ATTTAGATCACAAAA TERM 5310 4067101 - 4067130 + r 79 -12.4 -2.78679 | opp_overlap 4067101, overlap 4067100 TTACCATGCCATCAA TGTAGTACAACA CAATTA TGTTGTACTACA ATTTAGATCACAAAA TERM 5311 4067215 - 4067199 - R 100 -9.4 -5.82281 | opp_overlap 4067199 AAAGATATAAAAAAA CCCGCA GCAAG TGCGGG TCGTTAAGCGCGTAT SeD_A4223 4068097 - 4067252 - | phosphatase YidA TERM 5312 4068825 - 4068803 - g 72 -4 -4.7497 | overlap 4068805 CGTATTTATTAAAAA CTGGTTCCCG AAG CAGGAACGCG GCAGAGCAAACGCGG SeD_A4224 4068402 - 4069664 + | putative permease SeD_A4225 4069681 - 4070871 + | mandelate racemase/muconate lactonizing enzyme family protein TERM 5313 4070908 - 4070872 - T 76 -7.9 -4.20148 | opp_overlap 4070871 4070874 4070876, overlap 4070877 ATCACCGTAAAATAA GCCAACTGTCTGCCTGC GCC GCAGGCAGACACCCTGT ATTTGCGAGTCGTAT TERM 5314 4070874 - 4070907 + T 70 -8.9 -3.36991 | gap 1, opp_overlap 4070872 4070877, overlap 4070871 4070876 CACCGTAAAATAAGC CA-ACTGTCTGCCTGC GCC GCAGGCAGACACCCTG TATTTGCGAGTCGTA TERM 5315 4070876 - 4070904 + T 76 -11.7 -2.54801 | opp_overlap 4070872 4070877, overlap 4070874 4070871 CCGTAAAATAAGCCA ACTGTCTGCCTGC GCC GCAGGCAGACACC CTGTATTTGCGAGTC TERM 5316 4070903 - 4070877 - T 100 -15.2 -3.37556 | opp_overlap 4070876 4070874 4070871, overlap 4070872 CGTAAAATAAGCCAA CTGTCTGCCTGC GCC GCAGGCAGACAC CCTGTATTTGCGAGT TERM 5317 4071893 - 4071858 - T 79 -12.6 -2.77523 | gap 1, opp_overlap 4071853, overlap 4071855 4071853 TGTCGATGAACATCA TGATGCCCCGGCCAACC AGC GGTAGGCCGGGG-ATTA AGGCAGGTTAAATAT gyrB 4074315 - 4071901 - | DNA gyrase, B subunit TERM 5318 4073380 - 4073400 + g 79 -3.1 -5.21709 | overlap 4073375 4073374 TTCACGGGCATCGTC GCCAGTGGC GCT GACTTTGGC TTTTTTGCTGTAGCC TERM 5319 4074117 - 4074142 + g 73 -10.5 -3.39844 | opp_overlap 4074116 4074119, overlap 4074115 TTACGGACACGGAAT TATCGGCGTGA ATAG TCACGACGATA TCTTTACAGTGTCCC SeD_A4228 4075417 - 4074344 - | DNA replication and repair protein RecF dnaN 4076665 - 4075565 - | DNA polymerase III, beta subunit TERM 5320 4076598 - 4076629 + g 81 -8.6 -4.30809 | gap 1, opp_overlap 4076581 GGCAGCGTAGGACGA CCGC-CCAGCGGGCC GCT GACCTGCTGAAGCGG TTTTAATAAATGTTC dnaA 4078070 - 4076670 - | chromosomal replication initiator protein DnaA TERM 5321 4077122 - 4077146 + g 91 -7.1 -5.14965 | overlap 4077114 ACGCTACTTCGCCTG GCAGACGAATA TCA TTTTCGTCCGC TTTTTTCATCAGGAT TERM 5322 4077756 - 4077805 + g 74 -4.2 -4.70879 | opp_overlap 4077791, overlap 4077756 4077753 4077768 4077804 AGGCGCTACGCGCTG CGGCTGCGC-CGTCGTTGTCTGCG TAGG CGC-GACAACGTTATGCACAGGCG TTTTTAGCGTTTGCG TERM 5323 4077768 - 4077792 + g 71 -10.8 -3.29043 | gap 1, opp_overlap 4077791, overlap 4077753 4077756 CTGCGGCTGCGCCGT CGTTGTCTGCG TAGG CGC-GACAACG TTATGCACAGGCGTT rpmH 4078731 - 4078871 + | ribosomal protein L34 rnpA 4078888 - 4079247 + | ribonuclease P protein component TERM 5324 4079821 - 4079805 - g 89 -13.7 -3.58343 | TCTATCAGGCGCAAA GCGGCCT GAC AGGCCGC GACGGCCCGGATAAC SeD_A4233 4079471 - 4081117 + | inner membrane protein OxaA TERM 5325 4081232 - 4081205 - f 78 -12.8 -2.58861 | opp_overlap 4081210, overlap 4081210 TATCAGGCCTACAAT CAAAAGGCGGTC ATAT GACCGCCTTTTT TATTGCAACAAAGTT TERM 5326 4081227 - 4081210 - f 100 -12.7 -4.48987 | opp_overlap 4081210, overlap 4081205 GGCCTACAATCAAAA GGCGGTC ATAT GACCGCC TTTTTTATTGCAACA TERM 5327 4081210 - 4081227 + F 100 -12.7 -5.4505 | opp_overlap 4081205 4081210 GGCCTACAATCAAAA GGCGGTC ATAT GACCGCC TTTTTTATTGCAACA trmE 4081219 - 4082622 + | tRNA modification GTPase TrmE TERM 5328 4082770 - 4082812 + F 75 -6.4 -4.53163 | overlap 4082807 CGCGCAACGTCGCCC CGTATTCTTAGC-GCCACAC TTTTC GTGAGGCCGCTATGAA-ACG TTTTCTACTGTGTAG SeD_A4235 4082805 - 4083992 + | multidrug resistance protein MdtL SeD_A4236 4083961 - 4084920 + | HTH-type transcriptional regulator YidZ SeD_A4237 4085078 - 4085833 + | o252 SeD_A4238 4085833 - 4086417 + | YieF TERM 5329 4086426 - 4086456 + T 79 -9.6 -3.78022 | opp_overlap 4086430, overlap 4086430 AGCGTAAGTTCGTTA AAAACCCTCCCCCC GAT GGGGCGAGGGTTCA TTTCATCAGTGTGCG TERM 5330 4086452 - 4086430 - T 100 -14.8 -4.58283 | opp_overlap 4086426 4086430 TAAGTTCGTTAAAAA CCCTCCCCCC GAT GGGGCGAGGG TTCATTTCATCAGTG TERM 5331 4086430 - 4086452 + T 95 -14.8 -3.57418 | opp_overlap 4086430, overlap 4086426 TAAGTTCGTTAAAAA CCCTCCCCCC GAT GGGGCGAGGG TTCATTTCATCAGTG SeD_A4239 4087631 - 4086462 - | xanthine/uracil permease family protein TERM 5332 4086935 - 4086915 - G 74 -6.7 -4.28111 | overlap 4086917 GATACTATCAACAAA CAGCGCCTG CTT CATGCGCGG GAATTTGCCTTTCTC TERM 5333 4087510 - 4087496 - G 74 -2.1 -5.06414 | GCGGGTTAACAAAAA CGATA TAAAC CATCG TCAGGAAAGTGGTAA SeD_A4240 4087800 - 4088465 + | HAD hydrolase, IA family phoU 4089285 - 4088560 - | phosphate transport system regulatory protein PhoU pstB 4090109 - 4089300 - | phosphate ABC transporter, ATP-binding protein pstA 4091050 - 4090160 - | phosphate ABC transporter, permease protein PstA TERM 5334 4090819 - 4090845 + g 93 -17.3 -2.94144 | gap 1, overlap 4090816 GGGCGTTCGCCAGCC CGCCGCCCGCCG TGTT CGGCGG-CGGCG TCATTTCGGTAAACA pstC 4092009 - 4091050 - | phosphate ABC transporter, permease protein PstC TERM 5335 4091954 - 4091925 - G 77 -11.5 -3.53933 | gap 1, overlap 4091919 ACATCAATAGCACAA TCAGCGCAGCCAGT TTT ACCAGC-GCGCTGA AAATCATGTCGCCTT pstS 4093185 - 4092145 - | phosphate ABC transporter, periplasmic phosphate-binding protein PstS TERM 5336 4092898 - 4092921 + g 86 -7.4 -4.72272 | opp_overlap 4092898 GATCACCGTCGGAAA CTGGAACAGG CCTT CCTGATTCAG TTTTTCGTCAGACAG TERM 5337 4093333 - 4093307 - R 100 -12.2 -5.67283 | AATGGAAATAAAAAA GCTGGCCCGGGG AGA CACCAGACCAGC CTGCAGGGGGAGATG SeD_A4248 4095590 - 4094772 - | shikimate 5-dehydrogenase TERM 5338 4095550 - 4095569 + g 81 -8.6 -4.25458 | GGGCGTGCCGCCAGG GACATGCA GACC TGCGTGTC TTTATTAATGCGCTT TERM 5339 4096009 - 4095987 - g 73 -6.2 -4.40561 | GCTGGGTAAAAATAA GCACCAGGTG GCG CAACTGCTGC GTTCAAAGCTGGGCT TERM 5340 4096546 - 4096515 - g 70 -6.6 -4.08216 | opp_overlap 4096519, overlap 4096518 4096539 TGAGGTGGTGGAAAA CAATGGCTTTCATC TGCA AATGAAGGCCTTTG ACCACTATTTCGGTC SeD_A4249 4095652 - 4097442 + | HTH-type transcriptional regulator SgrR TERM 5341 4097568 - 4097551 - T 100 -12.7 -5.60993 | opp_overlap 4097551 CGGCGCACAAAAAAA GGCCGTC TATC GACGGCC TTCTGCCTGGTACTA TERM 5342 4097551 - 4097568 + T 85 -12.7 -3.38272 | opp_overlap 4097551 CGGCGCACAAAAAAA GGCCGTC TATC GACGGCC TTCTGCCTGGTACTA glmS 4099422 - 4097593 - | glutamine-fructose-6-phosphate transaminase TERM 5343 4098611 - 4098625 + g 74 -4.9 -4.74801 | opp_overlap 4098594 4098591, overlap 4098594 TCACCGTGGCTGATG CGCCC GGTAA GGGTG TTTTTGATCGCGTTC glmU 4100981 - 4099611 - | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase TERM 5344 4100719 - 4100709 - G 74 -2.4 -5.00884 | ATCGTCGCTAAAAAA GGGC GCG GCCT GCTGCATTGCGTGAC SeD_A4252 4101291 - 4101109 - | hypothetical protein TERM 5345 4101276 - 4101257 - G 100 -11.4 -5.1417 | opp_overlap 4101257 TCAGAAAAGCAAAAA CCAGCGAC AGAG GCCGCTGG TTTTCCGTTGCGCAT TERM 5346 4101257 - 4101276 + g 84 -9.2 -4.27584 | opp_overlap 4101257 TCAGAAAAGCAAAAA CCAGCGAC AGAG GCCGCTGG TTTTCCGTTGCGCAT SeD_A4253 4101999 - 4101301 - | hypothetical protein TERM 5347 4101911 - 4101896 - G 75 -6 -4.55023 | overlap 4101888 CTCAATACGATAAAA CCGACG ATGG CGACGG CGAGATGAAGATAAG TERM 5348 4102112 - 4102099 - R 81 -8.1 -4.45151 | opp_overlap 4102106, overlap 4102101 AAGATTTAATGAAAA CAGCG CTGT CGCTG AAAACGCGTCGCCTT TERM 5349 4102188 - 4102207 + r 82 -7.8 -4.61566 | opp_overlap 4102188, overlap 4102183 GAGGATAAAAAAAAA CCAGTCCG CAAT CAGACTGG TTTTATGCTTTCAAG TERM 5350 4102207 - 4102188 - R 100 -10 -6.26417 | opp_overlap 4102188 4102183 GAGGATAAAAAAAAA CCAGTCCG CAAT CAGACTGG TTTTATGCTTTCAAG atpC 4102642 - 4102229 - | ATP synthase F1, epsilon subunit atpD 4104051 - 4102669 - | ATP synthase F1, beta subunit atpG 4104941 - 4104078 - | ATP synthase F1, gamma subunit TERM 5351 4104766 - 4104799 + g 79 -12.5 -2.91264 | opp_overlap 4104766, overlap 4104777 TTATATTCCAGATTA CCGTTCGCAAGGTGA CCAA TCACTTTGCGCATGG TCTCTGCATAAGGAC atpA 4106533 - 4104992 - | ATP synthase F1, alpha subunit TERM 5352 4105971 - 4106007 + g 83 -10.1 -4.13014 | overlap 4105972 CATTTGATACCGGAA TCGCGCTGGTTGATGAT GGC GTCGATAGCCAGCGCGG TTTTACCGGTCTGAC TERM 5353 4105972 - 4106006 + g 72 -11.4 -3.07487 | overlap 4105971 ATTTGATACCGGAAT CGCGCTGGTTGATGAT GGC GTCGATAGCCAGCGCG GTTTTACCGGTCTGA atpH 4107079 - 4106546 - | ATP synthase F1, delta subunit atpF 4107564 - 4107094 - | ATP synthase F0, B subunit TERM 5354 4107438 - 4107459 + g 71 -7.3 -3.92869 | opp_overlap 4107432 4107431 CAGCAGAAGCGAGAC CGTCAGCAA TTTC TTTCTGACG TTTCTCGATGGCTGC atpE 4107863 - 4107624 - | ATP synthase F0, C subunit atpB 4108725 - 4107910 - | ATP synthase F0, A subunit TERM 5355 4108412 - 4108392 - G 74 -11.1 -3.29325 | overlap 4108390 GGTTCATAAGGAATA CCCAGACGA AAA TCGTCAGGG CCAGCGGCGCAATCA atpI 4108859 - 4108734 - | ATP synthase F0, I subunit SeD_A4263 4109372 - 4109229 - | hypothetical protein SeD_A4264 4109617 - 4109480 - | hypothetical protein gidB 4110351 - 4109728 - | 16S rRNA methyltransferase GidB gidA 4112343 - 4110454 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 5356 4110634 - 4110660 + g 70 -3 -4.7173 | overlap 4110625 ATCCAGCGTGGCAGG CAGCAACGTA TTCTCGT TACGTAGTTG TTTTTCAATCTCATC mioC 4113165 - 4112722 - | MioC protein TERM 5357 4113282 - 4113250 - R 79 -4.2 -5.14563 | gap 1, opp_overlap 4113250 4113251, overlap 4113251 TGTGGGATTAAAAAA GCCGATCATG-GC TTGATGGT GCGCATGATCGGG TTCTGCAAGACGATC asnC 4113713 - 4113255 - | regulatory protein AsnC TERM 5358 4114173 - 4114118 - g 91 -17.1 -2.73875 | gap 2 CCTGGGGCAACATGA CTTCAGCGCGGGCGAAGGGCTGTACAC GCAC ATGAA-AGCCCTTCGCCC-CGATGAAG ACCGACTCTCTCCGC TERM 5359 4114426 - 4114449 + G 74 -3.1 -4.91109 | gap 1, opp_overlap 4114414, overlap 4114429 AAGGGCGCGAACGCG CGATCGCCAA AGAAC TTGGCGC-CG TTTTTCTGGTGGGGA asnA 4113864 - 4114856 + | aspartate--ammonia ligase SeD_A4270 4116312 - 4114861 - | protein ViaA TERM 5360 4115262 - 4115239 - G 83 -8 -4.40181 | overlap 4115242 AAACAGCATAATAAA GCAGCGGCGG TTAT CCGCCAGCGC AACGCGCATCAACGC TERM 5361 4115691 - 4115707 + g 74 -10.1 -3.67188 | overlap 4115689 TTAGCTCCGGCTGGG CGGCGAG AAA TTCGCCG TATTTTACGATCAGT TERM 5362 4116168 - 4116181 + g 77 -3.7 -5.00616 | overlap 4116173 GCCAGCGCGGGAGAT CGGCG GTCA CGGCG TTTTTTAAACGCGGA SeD_A4271 4117802 - 4116306 - | ATPase RavA TERM 5363 4116775 - 4116802 + g 70 -5.6 -4.51799 | opp_overlap 4116775, overlap 4116761 4116799 CGGCGGCTGAACATA CCGCCTTC TTTAATGACGGT GAAGGCGG TTTTATCGCTTTGCT TERM 5364 4117135 - 4117151 + g 73 -5.1 -4.62302 | ACCGGATCAGGCAGT GAAATCG CGC CGATATC TTTTTGCCACTGTTG TERM 5365 4117318 - 4117334 + g 70 -10.1 -3.33696 | AAGGCTTCCAGGCTG CTGTCCG CTT CGGGCAG TTCGTTAGAGGCCGC TERM 5366 4117611 - 4117600 - G 77 -7.2 -4.26589 | ATCAGATATTCAAAA GCGC GGGC GCGC TGGAAAGCAAACTTC TERM 5367 4117953 - 4117967 + H 79 -4.2 -5.24129 | overlap 4117952 ATTTTATGATTAATC GTGCAT ACT GTGCGC TTTTTTGTGGGCCAA TERM 5368 4119042 - 4119062 + G 81 -11.9 -3.58731 | overlap 4119033 4119031 CCGCGCTGGCGACGG TGATCGCCT CCC AGGCGGTCA TTTCCGGCGTCTTTT kup 4118150 - 4120018 + | potassium uptake protein TERM 5369 4120108 - 4120085 - f 90 -14 -3.32343 | opp_overlap 4120087 4120090, overlap 4120090 CGTAGATTCCCACAA GATAATCGCC TGAT GGCGATTATC TTCACCTGATTTCCG TERM 5370 4120087 - 4120106 + F 73 -10.8 -3.0873 | opp_overlap 4120085 4120090, overlap 4120090 TAGATTCCCACAAGA TAATCGCC TGAT GGCGATTA TCTTCACCTGATTTC TERM 5371 4120090 - 4120103 + F 72 -8.1 -3.67878 | opp_overlap 4120085 4120090, overlap 4120087 ATTCCCACAAGATAA TCGCC TGAT GGCGA TTATCTTCACCTGAT TERM 5372 4120103 - 4120090 - f 72 -8.1 -3.75378 | opp_overlap 4120090 4120087, overlap 4120085 ATTCCCACAAGATAA TCGCC TGAT GGCGA TTATCTTCACCTGAT TERM 5373 4120585 - 4120568 - gf 81 -4.1 -5.2166 | overlap 4120556 4120560 4120569 GAACAATTCAAAAAA TTGACTG CAGA CAGTCAG GCGGTGATTCGCAGC rbsD 4120235 - 4120654 + | cytoplasmic D-ribose-binding protein RbsD rbsA 4120617 - 4122167 + | ribose ABC transporter, ATP-binding protein TERM 5374 4122277 - 4122289 + G 76 -3.4 -5.10029 | CGCGATTGTTTCGAC GTTG AGCCC CAAC TTTTTTACCGTTAAT rbsC 4122173 - 4123138 + | ribose ABC transporter, permease protein TERM 5375 4123612 - 4123595 - g 76 -3.3 -5.04385 | overlap 4123596 4123597 TATATCGCGAAAAAA GCTGGCG AAGG CGCCAAA GTGATTGAGTTGCAA TERM 5376 4124035 - 4124006 - g 70 -2.9 -4.70879 | overlap 4124007 4124021 CTGAAAGGCGAAAAA GTTCAGGCCAA ATATCCGG TTGACCTGAAA CTGGTCATCAAGCAG rbsB 4123163 - 4124053 + | ribose ABC transporter, periplasmic ribose-binding protein rbsK 4124186 - 4125115 + | ribokinase TERM 5377 4125879 - 4125893 + G 71 -11.4 -2.87132 | overlap 4125891 ATGCGATGGCTGTCG GCGCCT ATC AGGCGC TATATCAGGCGGGGC SeD_A4278 4125119 - 4126117 + | ribose operon repressor SeD_A4279 4127510 - 4126083 - | inner membrane transport protein YieO TERM 5378 4127224 - 4127204 - G 73 -6.2 -4.42748 | CGACGCGAAAAATAA CCAATTCA GATAG TGAACTGG AGAGCGCGCAGGCCA TERM 5379 4127480 - 4127454 - G 71 -7.3 -4.06419 | gap 2 CGCCTGCATAAAGAA GGCCATCGCCGCG ATC CACGGC-A-GGCC AGCCATACTGCGCGC SeD_A4280 4128226 - 4127522 - | transcriptional regulator, GntR family TERM 5380 4128154 - 4128164 + g 70 -6.8 -4.07568 | CACCCTTTAATATCC GCTG CGC CAGC TTTTCAGCCAGAACA TERM 5381 4130445 - 4130480 + r 77 -9.2 -4.00532 | opp_overlap 4130456 AGGCGTTGCCATCAG TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA TTTGCTCTTTAAAAA TERM 5382 4130544 - 4130520 - R 71 -8 -3.93061 | gap 1, opp_overlap 4130520 4130527, overlap 4130524 4130530 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5383 4131098 - 4131086 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5384 4134064 - 4134045 - R 87 -10.8 -4.06419 | opp_overlap 4134045 CCCTGCCAGAAATAA TCCTTAGC ATCT GCTAAGGA TTTTTTTTTGCCTAA TERM 5385 4134045 - 4134064 + r 100 -10.8 -6.11644 | opp_overlap 4134045 CCCTGCCAGAAATAA TCCTTAGC ATCT GCTAAGGA TTTTTTTTTGCCTAA TERM 5386 4134105 - 4134082 - R 76 -8.3 -4.07568 | opp_overlap 4134075 4134087 TTTTTTTGCCTAAAA TTACCTGAT TATCTG ATCAGGTAA TCGTAAGTTCCCTTC SeD_A4288 4134975 - 4134139 - | HTH-type transcriptional regulator HdfR SeD_A4289 4135094 - 4135432 + | hypothetical protein TERM 5387 4135439 - 4135451 + T 90 -6.9 -5.40072 | opp_overlap 4135433 4135439 4135440 GATGATTAATAAAAA GGGCG TAA TGCCC TTTTTTTACGCCAGC TERM 5388 4135451 - 4135439 - T 85 -6.2 -5.15167 | opp_overlap 4135439, overlap 4135433 4135440 GATGATTAATAAAAA GGGC GTAAT GCCC TTTTTTTACGCCAGC SeD_A4290 4136977 - 4135457 - | Mg chelatase homolog TERM 5389 4135740 - 4135754 + g 80 -4.2 -5.0538 | TACTGCCGTTCATGG GCGG CGATGAC CCGC TTTTTTACCGTAGCG TERM 5390 4136187 - 4136200 + g 72 -2.3 -4.8667 | opp_overlap 4136187 GGTGAGCGAAAGGGA CGTTG CTGC CATCG TTTTTGTACCGTATC TERM 5391 4137477 - 4137450 - H 79 -11.2 -3.45366 | opp_overlap 4137452, overlap 4137435 4137452 GCCTTAACGAACTAA GACCCCCGCACC GAAA GGTCCGGGGGTT TTTTTTGGCCTGAAA TERM 5392 4137475 - 4137452 - H 86 -13.8 -3.29727 | opp_overlap 4137452, overlap 4137450 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGGCCTGA TERM 5393 4137452 - 4137475 + H 100 -13.8 -5.78622 | opp_overlap 4137452 4137450 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGGCCTGA TERM 5394 4137728 - 4137762 + G 71 -7.8 -4.03413 | overlap 4137730 4137731 TGCGGCAATGGCGGC AATCGGTTATGCCCGT TCT ACCGGCAAAACCGGTG TTTGTATCGCCACCT TERM 5395 4137730 - 4137760 + G 74 -10.4 -3.61232 | overlap 4137728 4137731 CGGCAATGGCGGCAA TCGGTTATGCCCGT TCT ACCGGCAAAACCGG TGTTTGTATCGCCAC TERM 5396 4137731 - 4137759 + G 72 -11.7 -2.76418 | overlap 4137730 4137728 GGCAATGGCGGCAAT CGGTTATGCCCGT TCT ACCGGCAAAACCG GTGTTTGTATCGCCA ilvG 4137567 - 4139213 + | acetolactate synthase, large subunit, isozyme II ilvM 4139210 - 4139473 + | acetolactate synthase, isozyme II, small subunit TERM 5397 4139480 - 4139463 - f 72 -5.5 -4.3767 | overlap 4139465 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAAGAAAAATGAC ilvE 4139491 - 4140420 + | branched-chain amino acid aminotransferase TERM 5398 4142105 - 4142123 + G 82 -11 -3.86346 | TGGGCAAAGCCTGCG CGCTCATC ACC GATGGGCG TTTCTCCGGCGGTAC ilvD 4140580 - 4142430 + | dihydroxy-acid dehydratase TERM 5399 4142692 - 4142667 - g 84 -3.1 -5.30348 | opp_overlap 4142666, overlap 4142669 ACCGAAGAACAAAAA GCCCACGGCGT GATT ACCGCGTCGGC GGGGAACCATGCACA TERM 5400 4143948 - 4143959 + G 71 -7.2 -4.06687 | opp_overlap 4143948 4143947 GATGAGAGCAATAAC CCGG CGTT CCGG TTCTTTCTGGCGGGT ilvA 4142433 - 4143977 + | threonine ammonia-lyase, biosynthetic SeD_A4296 4144215 - 4144577 + | putative cytoplasmic protein SeD_A4297 4144574 - 4144915 + | transcriptional regulator, XRE family SeD_A4298 4145805 - 4144918 - | HTH-type transcriptional regulator IlvY TERM 5401 4144953 - 4144969 + g 100 -9.4 -5.40072 | opp_overlap 4144942 4144953 AGAACGCATCAATTA GCGGCT CATGC AGCCGC TTTTTTTGCGCGCAG TERM 5402 4144986 - 4145003 + g 90 -5.5 -5.1675 | TTTTTTGCGCGCAGA CGCCG AGTTCAAA CGGCG TTTTTTCATCGCTGC TERM 5403 4145697 - 4145665 - G 100 -13.4 -3.93695 | GTTATCACGCACAAA CAGCGGCTGGCCGA GATCT TCTTCCAGCCGCTG AATCTGCCGGGAGAG TERM 5404 4146018 - 4145996 - g 87 -13.4 -3.19175 | CTTTAATACACTGAA TCTGCGCCAG CAG CTGGCGCAGC TGGGTAAATGTCGCT SeD_A4299 4145970 - 4147445 + | ketol-acid reductoisomerase TERM 5405 4147507 - 4147532 + T 100 -9.7 -5.64421 | gap 1 AGCAGACGATGTAGG CCGGGTA-AGGC GTA GCCGCTACCCGG TTTTTTATTTGCGAT SeD_A4300 4147818 - 4147537 - | peptidyl-prolyl cis-trans isomerase C TERM 5406 4148267 - 4148292 + H 86 -13.3 -3.32202 | overlap 4148265 GCTGATTGACCTTTT CCAGGCTGCCT GAAA AAGCAGCCTGG TCTTCTCTGGGCCTC rep 4148356 - 4150380 + | ATP-dependent DNA helicase Rep gppA 4151901 - 4150420 - | guanosine-5'-triphosphate,3'-diphosphate diphosphatase rhlB 4153303 - 4152038 - | ATP-dependent RNA helicase RhlB TERM 5407 4152555 - 4152573 + g 72 -3.8 -4.73864 | overlap 4152556 CACTCTTCTTCGATC AGCGTTTG CAG TAAACGCA TTTTCTCTTCATTAG trx 4153447 - 4153776 + | thioredoxin TERM 5408 4153786 - 4153836 + F 71 -10.6 -2.74563 | gap 1 GCGTAATACCTTTTA TACGTCGAATGACAAAGGCGCTG TATAGT CAG-GCGTCTGTCATTCGACGAA TGATTAAGGTATCAG rho 4154195 - 4155454 + | transcription termination factor Rho TERM 5409 4155468 - 4155499 + F 100 -14.6 -4.20696 | opp_overlap 4155456 4155474, overlap 4155474 AACCTGGTCTTTACC TGAAAACGCCACGT TTTT ACGTGGCGTTTTTG TTTTGCGATTCATCC TERM 5410 4155493 - 4155474 - f 100 -13.6 -4.13767 | opp_overlap 4155468 4155474 GTCTTTACCTGAAAA CGCCACGT TTTT ACGTGGCG TTTTTGTTTTGCGAT TERM 5411 4155474 - 4155493 + F 100 -13.6 -5.46706 | opp_overlap 4155474, overlap 4155468 GTCTTTACCTGAAAA CGCCACGT TTTT ACGTGGCG TTTTTGTTTTGCGAT TERM 5412 4155795 - 4155775 - g 85 -7 -4.89339 | opp_overlap 4155774 AAGTAGCCATAAAAA TTGGTTTA GTGGA TAAACCAA ACTTTCGTAAACGAC TERM 5413 4155852 - 4155863 + G 71 -5.8 -4.33928 | overlap 4155839 GGGATTTCTGTGTTT GCAG GAAT CTGC TTTATGTTTGGCCTC wecA 4155684 - 4156787 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase SeD_A4307 4156799 - 4157845 + | lipopolysaccharide biosynthesis protein WzzE TERM 5414 4157857 - 4157880 + F 80 -12.5 -3.06696 | overlap 4157859 TTAGCAACACCTCTG CAGTAGGGG GCTGGG CCCCTACTG TCTATTCGAAGAGAA SeD_A4308 4157901 - 4159031 + | UDP-N-acetylglucosamine 2-epimerase TERM 5415 4160097 - 4160070 - g 74 -10.6 -3.55444 | gap 1, overlap 4160073 TGGGGATCGCGCAAA GTATCGCCCGCTG GCA CAGCGG-CGAAAC CCTGGTCGTCGAACC SeD_A4309 4159028 - 4160290 + | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 5416 4161133 - 4161121 - g 70 -3.3 -4.82901 | CTGGCCCCACAAAAA CCGCA GGG TGTGG CGAATTATCACGATC rfbB2 4160290 - 4161357 + | dTDP-glucose 4,6-dehydratase TERM 5417 4161572 - 4161559 - g 74 -2.3 -5.03314 | overlap 4161560 GTCAGCTTGAAAAAA CCGGC TATG GCCAA TATTTACTGGAGTTG SeD_A4311 4161390 - 4161614 + | glucose-1-phosphate thymidylyltransferase wecD 4161592 - 4162269 + | TDP-D-fucosamine acetyltransferase TERM 5418 4163148 - 4163128 - g 74 -7.5 -4.09685 | opp_overlap 4163128 4163129, overlap 4163129 TTCTATTCCGGAAAA CTGCGGGCA TAA TGCCCACAT GTTTTACATCAAACT TERM 5419 4163129 - 4163147 + G 70 -8.8 -3.69216 | opp_overlap 4163129 4163128, overlap 4163128 TCTATTCCGGAAAAC TGCGGGCA TAA TGCCCACA TGTTTTACATCAAAC TERM 5420 4163147 - 4163129 - g 72 -11 -3.05597 | opp_overlap 4163128 4163129, overlap 4163128 TCTATTCCGGAAAAC TGCGGGCA TAA TGCCCACA TGTTTTACATCAAAC wecE 4162274 - 4163404 + | TDP-4-keto-6-deoxy-D-glucose transaminase SeD_A4314 4163406 - 4164656 + | polysaccharide biosynthesis protein TERM 5421 4164705 - 4164715 + G 74 -4.6 -4.68593 | opp_overlap 4164700 CTCACCATAACCACA CCGT GCT GCGG TTTTTCAATGATACG TERM 5422 4164804 - 4164819 + G 72 -2.4 -4.84359 | opp_overlap 4164798 TCACGGAAAGCTGCC CGGCGC TCTC GCTTCG TTTTTATGGCAGTAA TERM 5423 4165008 - 4165022 + G 70 -5.6 -4.386 | ACGAAGTGTCCAACG GGCTGA AAT TCCGCC TTTTCTACCCGCTTC TERM 5424 4165349 - 4165366 + G 75 -12.7 -2.60496 | overlap 4165348 4165347 TATATTGATGAGGTT CGCCAGG CCGG CCTGGCG CTATTTAGCGCCGAA wecF 4164653 - 4165732 + | TDP-Fuc4NAc:lipid II Fuc4Nac transferase TERM 5425 4166017 - 4166000 - g 88 -9.9 -4.42653 | opp_overlap 4166000, overlap 4166014 4166015 ACGTGACCTATAAAA CGCGTTT ACGC AAACGCG TTGTGGATGTACCAC TERM 5426 4166000 - 4166017 + G 70 -9.9 -3.39327 | opp_overlap 4166000 4166014 4166015 ACGTGACCTATAAAA CGCGTTT ACGC AAACGCG TTGTGGATGTACCAC wzyE 4165729 - 4167087 + | ECA biosynthesis protein WzyE TERM 5427 4167476 - 4167465 - g 73 -5.8 -4.44548 | CAGACGGAAGCAAAA CTGC GGAC GCAG TGGAACGTCAATATT SeD_A4317 4167084 - 4167824 + | glycosyl transferase, WecB/TagA/CpsF family TERM 5428 4168002 - 4167990 - f 79 -9.1 -4.03888 | TACCCATAACAATAA CCGGT ACT ACCGG AACCGTTGCAAACAC TERM 5429 4169003 - 4168978 - g 87 -8.3 -4.56597 | gap 1, overlap 4168979 CGCGCTGGCGAAAAA CCGTCAACTGCC GGC GGCAGTCG-CGA AAGTCTCTCGCCACG TERM 5430 4169002 - 4168979 - g 70 -9.6 -3.33744 | gap 1, overlap 4168978 GCGCTGGCGAAAAAC CGTCAACTGCC GGC GGCAGTCG-CG AAAGTCTCTCGCCAC TERM 5431 4169028 - 4169048 + G 70 -3.1 -4.70319 | overlap 4169012 4169011 4169030 4169032 GCCACGGCGTGCCGG TCGCGGGCG TGG CGCTCTCTA TTTTGATTTTGCTGG SeD_A4318 4168031 - 4169413 + | amino acid permease family protein TERM 5432 4169957 - 4169972 + T 100 -11.8 -5.8901 | CCGACCAATTTTGAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT TERM 5433 4170431 - 4170455 + T 100 -9.9 -5.64274 | ACAGACCTGTTTTGA CGCCAGCCC CTTAACC GGGCAGGCG TTTTTTTATGCATCC hemY 4171729 - 4170530 - | HemY protein TERM 5434 4171198 - 4171220 + g 70 -5.4 -4.4078 | overlap 4171189 4171199 CCTCCAGCAGTTTGT CCACGCCGTG ACG CGCTGCGTGA TTTTCATTGCGCGCC SeD_A4325 4172898 - 4171729 - | putative uroporphyrin-III C-methyltransferase TERM 5435 4172512 - 4172535 + g 79 -3 -5.24416 | overlap 4172513 CAGCCAGGTTTTAGC ATCGCTGCCG GAAA TGGTGGCGAC TTTTTGTTGTACTTC TERM 5436 4172682 - 4172696 + g 82 -11.4 -3.84451 | overlap 4172676 CGGTCAGTTGCGTCG CCAGCG CAT CGCTGG TTTCCGTTTGCGCGG TERM 5437 4172770 - 4172800 + g 83 -9.6 -4.11105 | opp_overlap 4172787 CAGGGCAATCGCAAT CGCCACCGCGCT TAATACC AGCGCGGCGCCG TTCTTACTTTTTTTC hemD 4173660 - 4172920 - | uroporphyrinogen-III synthase hemC 4174598 - 4173657 - | porphobilinogen deaminase TERM 5438 4173874 - 4173894 + g 72 -11.1 -3.15579 | opp_overlap 4173877 CCAATCGGCACCTGA CAACCGCCT TCC AGGCGGGTG TTCATAGCGCGTTCC TERM 5439 4173891 - 4173877 - G 75 -11.4 -3.32963 | opp_overlap 4173874 ATCGGCACCTGACAA CCGCCT TCC AGGCGG GTGTTCATAGCGCGT TERM 5440 4174288 - 4174278 - G 74 -8.2 -4.05033 | overlap 4174279 TTTATTCGAGACAAA CGCG TCG CGCG GATCTTCGCGCTCGC cyaA 4174975 - 4177521 + | adenylate cyclase, class I TERM 5441 4177591 - 4177567 - T 79 -12.1 -3.25823 | CCGGGTCTACAGTAA GCCGGATAAGC AAA GCGCATCCGGC AAATAAATCAACGAA cyaY 4177919 - 4177599 - | iron donor protein CyaY SeD_A4330 4178369 - 4177989 - | putative inner membrane protein TERM 5442 4178309 - 4178322 + g 95 -9.5 -4.6856 | opp_overlap 4178303, overlap 4178304 ATGAACCGATCCCCA CGCCC CGAA GGGCG TTTTTCAGATGTTTA TERM 5443 4179193 - 4179176 - g 74 -3.3 -4.85599 | overlap 4179178 GCCAGCCGATAAAAA TGCGCCG CCGC CGACGAA AAAAGTCGATTCGCA SeD_A4333 4179075 - 4179278 + | putative lipoprotein dapF 4179315 - 4180139 + | diaminopimelate epimerase SeD_A4335 4180136 - 4180843 + | hypothetical protein xerC 4180840 - 4181742 + | tyrosine recombinase XerC TERM 5444 4182154 - 4182126 - g 82 -5.2 -5.0133 | overlap 4182128 4182149 CAGCTTGCGAAAAAA TGGCCGCTGGTG GCGAT CACTAACGGCAA CGCCCAGCCGGAACT SeD_A4337 4181742 - 4182458 + | HAD-superfamily hydrolase TERM 5445 4182548 - 4182559 + F 87 -7.2 -5.1166 | opp_overlap 4182532 4182547, overlap 4182534 4182533 CCCCGGTAAGCGAAG CGCC ACCG GGCG TTTTTAGTTTTCATG TERM 5446 4183963 - 4183938 - g 100 -11.8 -4.8048 | opp_overlap 4183949 TTGTTACAGGAAAAA GCCCTGGCCG GGCGTG CGGCCAGCGC GCTGCAACGCTTTAT uvrD 4182594 - 4184756 + | DNA helicase II TERM 5447 4185269 - 4185257 - g 85 -2.6 -5.47399 | TCAACTGGAAAAAAA CCGA CTGAC CCGG CTGGAAGTCGAGGAG corA 4185228 - 4186178 + | magnesium and cobalt transport protein CorA TERM 5448 4186214 - 4186181 - T 89 -11.1 -4.08692 | gap 1, opp_overlap 4186180 4186189, overlap 4186183 4186185 GAACTGGTTGTAAAA TATACGGACTGGCGAT TTA ACCGCCAGTCCGT-TG GAAGTTCTTCATCAT TERM 5449 4186213 - 4186183 - T 100 -16.2 -3.63922 | opp_overlap 4186180 4186189, overlap 4186181 4186185 ACTGGTTGTAAAATA TACGGACTGGCGAT TTA ACCGCCAGTCCGTT GGAAGTTCTTCATCA TERM 5450 4186211 - 4186185 - T 100 -18.8 -3.39908 | opp_overlap 4186180 4186189, overlap 4186183 4186181 TGGTTGTAAAATATA CGGACTGGCGAT TTA ACCGCCAGTCCG TTGGAAGTTCTTCAT SeD_A4340 4186606 - 4186226 - | hypothetical protein TERM 5451 4186600 - 4186610 + g 78 -2.6 -5.1615 | TATCTTTAATAATCC TAAT CAT ATTA TTTTTTCCATATTGA SeD_A4341 4186781 - 4187077 + | hypothetical protein TERM 5452 4187114 - 4187078 - T 95 -11.8 -4.34486 | opp_overlap 4187080 4187085, overlap 4187080 4187085 ACTAAGAAGAAATAA CATAAAATGGCAGCCA GATAA TAGCTGCCATTTTATT ATTTAATGCTTACGC TERM 5453 4187112 - 4187080 - T 100 -14.4 -3.75532 | opp_overlap 4187080 4187085, overlap 4187078 4187085 TAAGAAGAAATAACA TAAAATGGCAGCCA GATAA TAGCTGCCATTTTA TTATTTAATGCTTAC TERM 5454 4187080 - 4187112 + T 95 -12.2 -4.04927 | opp_overlap 4187080 4187078 4187085, overlap 4187085 TAAGAAGAAATAACA TAAAATGGCAGCCA GATAA TAGCTGCCATTTTA TTATTTAATGCTTAC TERM 5455 4187085 - 4187107 + T 88 -7.7 -5.02606 | opp_overlap 4187085 4187080 4187078, overlap 4187080 AGAAATAACATAAAA TGGCAGCCA GATAA TAGCTGCCA TTTTATTATTTAATG TERM 5456 4187107 - 4187085 - T 100 -9.9 -4.86029 | opp_overlap 4187080 4187085, overlap 4187080 4187078 AGAAATAACATAAAA TGGCAGCCA GATAA TAGCTGCCA TTTTATTATTTAATG rarD 4188004 - 4187117 - | RarD protein TERM 5457 4187172 - 4187161 - G 71 -5.8 -4.3129 | CATCCATCACGAAAA TCGC CAGC GCGA CCCAGATAAACGCAA TERM 5458 4187264 - 4187246 - G 70 -3.1 -4.72986 | overlap 4187248 CACCGCCAGTAAAAA CATCAGC GTTGG GCCGATA TACTGGAAAAAGCCC TERM 5459 4187446 - 4187431 - G 84 -9 -4.27886 | TGCCAAACAGATAAA TTGCCG CGAC CGGCAA CAGCCATAGCGTTTC SeD_A4343 4188515 - 4188048 - | thioesterase family protein SeD_A4344 4188680 - 4189549 + | phospholipase A1 TERM 5460 4189584 - 4189605 + F 100 -12.3 -4.63479 | TTGCAGTTTCTCTCG CAGGCGCTG AAAA TAGCGCCTG TTTTGATTTATGGTG TERM 5461 4190506 - 4190516 + G 70 -6.8 -4.13945 | overlap 4190501 CTGCAAATCGTGGTG GCGA CCG TCGC TTTTGGAATGGGCAT TERM 5462 4191355 - 4191329 - g 71 -7.3 -4.04206 | gap 1, opp_overlap 4191332, overlap 4191312 CCACGTTGATAGAAA TGGCGG-AACAG ATGC CGGTTTCCGCCA GCGAGATGTTAAGCG recQ 4189615 - 4191462 + | ATP-dependent DNA helicase RecQ SeD_A4346 4191526 - 4192146 + | threonine efflux protein SeD_A4347 4192806 - 4192186 - | homoserine/homoserine lactone efflux protein TERM 5463 4193370 - 4193411 + G 100 -13.8 -3.98159 | gap 2, overlap 4193406 CTGTTCCTGCAACGC CATCGTGTGCGGTGCGACGC TATT GCG-CTCACCGCGC-CGATG TTTGGTATTGTGATA pldB 4192917 - 4193933 + | lysophospholipase L2 TERM 5464 4195019 - 4194996 - T 76 -5.2 -4.78149 | GGCACAACCTAAAAA CCATCAGCCT GTAT ATGCTGGTGG GGGCGATGCAGCTTG metR 4196570 - 4195617 - | transcriptional regulator MetR TERM 5465 4198012 - 4198001 - g 86 -7.2 -4.82901 | overlap 4198002 4198003 GCCGCGGTAGAAAAA CGCC TGGC GGCG ATCACCGCGCAGGAC metE 4196819 - 4199083 + | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase SeD_A4352 4199271 - 4199417 + | hypothetical protein SeD_A4353 4199474 - 4200769 + | chondroitin sulfate/heparin utilization regulation protein TERM 5466 4200766 - 4200752 - f 86 -2.8 -5.72118 | AAAAAATATAAAAAA TGCTGT GGT AAAGCA TAGCTAACGTGGCGA TERM 5467 4201245 - 4201228 - f 72 -2.7 -5.06414 | gap 1, overlap 4201229 CCTCCCCAACAAAAA CCGG-TGA TCA TCAGCCGA TGCGCATCCCCGCCG TERM 5468 4201773 - 4201786 + F 76 -5.3 -4.77036 | TATTGATTATTTATT GTGAT GAAC ATCAC TTTTTAATGGTAAGC udp 4201913 - 4202674 + | uridine phosphorylase TERM 5469 4202689 - 4202715 + F 95 -10.9 -4.65895 | opp_overlap 4202694, overlap 4202694 ATTCTCCTCTCTTTT GCAAAGGCCGA CGCGT TCGGCCTTTTC TTTTTGCGTGGCGCC TERM 5470 4202694 - 4202710 + F 100 -9.4 -5.2853 | opp_overlap 4202694, overlap 4202689 CCTCTCTTTTGCAAA GGCCGA CGCGT TCGGCC TTTTCTTTTTGCGTG TERM 5471 4202710 - 4202694 - f 72 -9.4 -3.53012 | opp_overlap 4202694 4202689 CCTCTCTTTTGCAAA GGCCGA CGCGT TCGGCC TTTTCTTTTTGCGTG SeD_A4356 4202814 - 4204244 + | DNA recombination protein RmuC TERM 5472 4204408 - 4204421 + G 72 -2.3 -4.96646 | AGAGCAGAAAGCTGA CATGG TGGC CCACG TTTTTCATTCTGTGG SeD_A4357 4204340 - 4205095 + | ubiquinone/menaquinone biosynthesis methyltransferase UbiE SeD_A4358 4205105 - 4205710 + | hypothetical protein TERM 5473 4206989 - 4206999 + G 81 -8.2 -4.254 | opp_overlap 4206989 TTGATTTGTGGAAAA CGGC GAA GCCG TTTCTTGAGTCTTGG TERM 5474 4206999 - 4206989 - g 77 -8.2 -4.08767 | opp_overlap 4206989 TTGATTTGTGGAAAA CGGC GAA GCCG TTTCTTGAGTCTTGG ubiB 4205707 - 4207347 + | 2-polyprenylphenol 6-hydroxylase SeD_A4360 4207553 - 4207807 + | Sec-independent protein translocase protein TatA SeD_A4361 4207811 - 4208359 + | Sec-independent protein translocase protein TatB TERM 5475 4208552 - 4208562 + G 80 -4.6 -5.04385 | overlap 4208542 4208541 TGATTGCGACGGATG TGGC GTC GCCG TTTTTTACGCCTATC tatC 4208362 - 4209141 + | twin arginine-targeting protein translocase TatC TERM 5476 4209168 - 4209143 - f 95 -13.3 -3.94184 | opp_overlap 4209145 4209148, overlap 4209145 ACACTGAAGACTAAA CACAACCGCCC GCCA GGGCGGTTGTC ATATGGGGGCAAGCA TERM 5477 4209145 - 4209166 + F 90 -15.9 -2.62184 | opp_overlap 4209143 4209145, overlap 4209148 ACTGAAGACTAAACA CAACCGCCC GCCA GGGCGGTTG TCATATGGGGGCAAG TERM 5478 4209166 - 4209145 - f 100 -15.9 -3.55486 | opp_overlap 4209145 4209148, overlap 4209143 ACTGAAGACTAAACA CAACCGCCC GCCA GGGCGGTTG TCATATGGGGGCAAG TERM 5479 4209148 - 4209163 + F 82 -11.8 -3.46602 | opp_overlap 4209145 4209143, overlap 4209145 GAAGACTAAACACAA CCGCCC GCCA GGGCGG TTGTCATATGGGGGC SeD_A4363 4209171 - 4209965 + | deoxyribonuclease TatD rfaH 4210461 - 4209973 - | transcriptional activator RfaH TERM 5480 4210329 - 4210349 + g 76 -3.2 -5.02074 | overlap 4210330 GCGGTTCGCTGACGG AGGTACGT TTTCC GCGTACCA TTTTTTCCAGGGTGA TERM 5481 4210619 - 4210593 - H 75 -3 -5.13741 | overlap 4210598 CTAATTTAACAAAAA TACAGCATCC CGATGAT GAACGCCGTA TAATGATGCGCTTAC TERM 5482 4211059 - 4211047 - g 71 -4.8 -4.66537 | opp_overlap 4211047 4211057 CTTGCCAACAGAAAA TCGC GTCTG GCGA TGATGTCGATTTAAC ubiD 4210647 - 4212125 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 5483 4212193 - 4212175 - f 74 -6 -4.56775 | opp_overlap 4212139 ACTCGGCTTGAAAAA TGTCGG TATTGAC CCGACA CCCGACAGAGGGAGC TERM 5484 4212281 - 4212294 + G 73 -5.9 -4.41047 | overlap 4212282 ATCGGGTTCGTTTAG TGCCG GACG CGGCG TTTTCATTCCGCGCT SeD_A4366 4212211 - 4212912 + | oxidoreductase NAD/FAD-binding domain protein TERM 5485 4212922 - 4212939 + F 100 -12.7 -4.74504 | ATTTAACTATTTTAT GGGACGC AGTA GCGTCCC TTTTTACGTTAGCCT TERM 5486 4213277 - 4213312 + G 72 -11.2 -3.06915 | overlap 4213275 4213281 CCCTATGATATCGCG CCGCTAACCGCCGTTA TTCG TAATGGCGGTTACCAG TTACGTGACGTGCAT TERM 5487 4213846 - 4213825 - g 74 -2.9 -4.86731 | GGGCTTTAAACAAAA CCAGGATGG CGCA CTATCGTGG GGCTACGGTCAGCGT TERM 5488 4214472 - 4214448 - g 74 -2.1 -5.12707 | gap 1 GCAAAGGCCAAAAAA TCGCCTGCCA GGACAG TGGCTG-CGA GGGTGACTTCGACTG SeD_A4367 4213115 - 4214938 + | arylsulfotransferase TERM 5489 4214979 - 4214961 - T 100 -13.1 -5.04385 | CATACGGTGAAAAAA CCCGCCC CTGAC GGGCGGG AAAAACGGCAACTAA TERM 5490 4215045 - 4215078 + T 100 -21.1 -3.09933 | TGGCTGCCTTTGCTC ACCCCGGGCACATAG TTAT CTATGTGCCCGGGGA TTCGCTCAGTTGCCG fadA 4216298 - 4215135 - | acetyl-CoA C-acyltransferase FadA TERM 5491 4215979 - 4215965 - G 70 -7 -4.1347 | CGCCAACCAGACAAA CCTGCG CAT CGCCGG TCATGATCATTCGCG fadB 4218623 - 4216308 - | fatty oxidation complex, alpha subunit FadB TERM 5492 4216878 - 4216910 + g 72 -4 -4.69027 | gap 1, opp_overlap 4216882 4216884 ACCCACCACGTCGAG CAGATAGGCCGGGCC CATC GGCCAG-CCGAACTG TTTTTCCATCACTTT pepQ 4218687 - 4220018 + | Xaa-Pro dipeptidase SeD_A4371 4220018 - 4220632 + | conserved hypothetical protein TIGR00257 TERM 5493 4220910 - 4220931 + G 86 -7.9 -4.77173 | overlap 4220911 GTTCTGGACCGTGCT GGGCAGCGT GGGT GCGCTGCCG TTTATTTTCTCGGAA TERM 5494 4220911 - 4220930 + G 75 -11.4 -3.45581 | overlap 4220910 TTCTGGACCGTGCTG GGCAGCGT GGGT GCGCTGCC GTTTATTTTCTCGGA trkH 4220671 - 4222122 + | Trk system potassium uptake protein TrkH hemG 4222134 - 4222679 + | protoporphyrinogen oxidase TERM 5495 4224990 - 4224953 - g 79 -3.4 -5.14563 | opp_overlap 4224955 4224983, overlap 4224955 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT SeD_A4377 4224938 - 4225054 + | hypothetical protein TERM 5496 4225053 - 4225029 - T 71 -8 -3.93061 | gap 1, opp_overlap 4225029 4225036, overlap 4225033 4225039 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5497 4225607 - 4225595 - T 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5498 4228335 - 4228384 + T 90 -15.3 -2.7035 | opp_overlap 4228349, overlap 4228339 4228344 4228349 GGAACTGCCAGGCAT CAAATAGAATGAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTATCTG TAGTCTGTCGGTGAG TERM 5499 4228339 - 4228380 + T 88 -14.7 -2.99545 | opp_overlap 4228349, overlap 4228335 4228344 4228349 CTGCCAGGCATCAAA TAGAATGAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTA TCTGTAGTCTGTCGG TERM 5500 4228344 - 4228375 + T 100 -12.4 -4.63586 | opp_overlap 4228349, overlap 4228339 4228335 4228349 AGGCATCAAATAGAA TGAAAGGCTCAGTC GAAA GACTGGGCCTTTTG TTTTATCTGTAGTCT TERM 5501 4228370 - 4228349 - T 83 -10.1 -4.11501 | opp_overlap 4228344 4228339 4228335 4228349 TCAAATAGAATGAAA GGCTCAGTC GAAA GACTGGGCC TTTTGTTTTATCTGT TERM 5502 4228349 - 4228370 + T 100 -12.3 -5.24647 | opp_overlap 4228349, overlap 4228344 4228339 4228335 TCAAATAGAATGAAA GGCTCAGTC GAAA GACTGGGCC TTTTGTTTTATCTGT TERM 5503 4228435 - 4228421 - T 71 -7.8 -3.99324 | opp_overlap 4228421 CCTGAGGAGGAGAAA TCCGCC GGG AGCGGA TTTGAACGTTGCGCA TERM 5504 4228537 - 4228518 - T 100 -13.6 -3.69283 | opp_overlap 4228518 CAATTTAGTGAAGAA GCCCATCC GTCA GGATGGGC TTTTTTGCGTGTGCG TERM 5505 4228518 - 4228537 + T 100 -13.6 -5.1287 | opp_overlap 4228518 CAATTTAGTGAAGAA GCCCATCC GTCA GGATGGGC TTTTTTGCGTGTGCG TERM 5506 4228624 - 4228580 - T 79 -11.4 -3.30243 | gap 1, opp_overlap 4228580 4228614, overlap 4228570 4228567 ATGTAGGCCTGATAA GCGCAG-CGCCATCAGGCAAC CGGC ACCGCCGGATGGCGGCTCCGC CTTATTCGGCCTACA mobB 4229165 - 4228635 - | molybdopterin-guanine dinucleotide biosynthesis protein B mobA 4229731 - 4229147 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 5507 4229344 - 4229324 - G 70 -9.7 -3.41693 | overlap 4229321 4229320 GGCACGATTAATCAA CGCGATCGT TGG ATGATCGCG CTCTCCATCATGAAC SeD_A4383 4229801 - 4230070 + | hypothetical protein TERM 5508 4230679 - 4230660 - g 87 -8.6 -4.56597 | CCCTCCGGGCAAAAA GCGGCTTT CCTG AAAGCCAC TGATACTCTACTGTC TERM 5509 4231047 - 4231025 - g 91 -7.7 -5.00616 | opp_overlap 4231024 TGCGTTTCCAAAAAA CTTTCCCTG GTTAA CAGGGGAAG ATTACTGGCAGCGAC SeD_A4384 4230147 - 4231133 + | protein RdoA TERM 5510 4231264 - 4231278 + G 82 -5.6 -5.01535 | overlap 4231266 4231275 CCGGTCGCTGGCGAA CCCCAG GTA CTGGAG TTTTTCTCCTTCTAC TERM 5511 4231368 - 4231353 - g 80 -4.6 -5.10208 | overlap 4231355 CAATGTGAAGAAAAA GCTGCC GGAA GGCACC AAAATGACCAAGTAC SeD_A4385 4231150 - 4231773 + | thiol:disulfide interchange protein DsbA TERM 5512 4231801 - 4231777 - T 100 -14.3 -5.8096 | opp_overlap 4231780, overlap 4231780 GATAAAAAATAAAAA GAACGCCGGTC ACT GACCGGCGTTT TTATAAGATGTTTTA TERM 5513 4231798 - 4231780 - T 100 -16 -4.8855 | opp_overlap 4231780, overlap 4231777 AAAAAATAAAAAGAA CGCCGGTC ACT GACCGGCG TTTTTATAAGATGTT TERM 5514 4231780 - 4231798 + T 100 -16 -4.87273 | opp_overlap 4231780 4231777 AAAAAATAAAAAGAA CGCCGGTC ACT GACCGGCG TTTTTATAAGATGTT SeD_A4386 4232694 - 4231786 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase SeD_A4387 4233023 - 4232892 - | hypothetical protein TERM 5515 4234897 - 4234886 - g 83 -7.2 -4.63486 | overlap 4234887 AGCCGCTGAAGAAAA CGCC TGGC GGCG CGCCGTCAACGTCGG TERM 5516 4235610 - 4235577 - g 74 -11.5 -3.25802 | overlap 4235573 TATTAAATCTAGCAA CGCGGCGCGGCGCGC GGGG GCGGAACGCGCGGCG ATCAATGCTCCCATG SeD_A4388 4233082 - 4235868 + | DNA polymerase I TERM 5517 4236093 - 4236119 + T 100 -18.1 -5.55769 | opp_overlap 4236086 GCTGAATATTTTAGC CGCCCCAGTCA GTTTA TGACTGGGGCG TTTTTTATTGTGCGC ysxC 4236835 - 4236203 - | ribosome biogenesis GTP-binding protein YsxC TERM 5518 4236520 - 4236496 - G 71 -6.3 -4.29738 | opp_overlap 4236496 GGATATCCATTAAAA CGACTAAGCCC TGT AGGCTTTGACG TTTCTCCAGATATTC TERM 5519 4236656 - 4236684 + g 81 -2.3 -5.30155 | AATCAATTGGGTACG GCCCGGCGT TTTAGAGGTGC GCGCCAGGC TTTTTTGGTTGGTCA TERM 5520 4237305 - 4237358 + H 100 -19.9 -3.99405 | opp_overlap 4237321, overlap 4237321 AACCCGTTAAGGGTC GTGAGTCAAGAAAAAAGGCGGCAGA TTAC TCTGTCGCCTTTTTTCTTTGCTTGC TTTCTGCTAGATTCC TERM 5521 4237321 - 4237342 + H 100 -12.3 -5.72053 | opp_overlap 4237321, overlap 4237305 TGAGTCAAGAAAAAA GGCGGCAGA TTAC TCTGTCGCC TTTTTTCTTTGCTTG TERM 5522 4237342 - 4237321 - H 100 -10.1 -5.4833 | opp_overlap 4237305 4237321 TGAGTCAAGAAAAAA GGCGGCAGA TTAC TCTGTCGCC TTTTTTCTTTGCTTG SeD_A4392 4237418 - 4237933 + | hypothetical protein hemN 4238122 - 4239495 + | oxygen-independent coproporphyrinogen III oxidase ntrC 4241217 - 4239808 - | nitrogen regulation protein NR TERM 5523 4240265 - 4240247 - G 80 -4.4 -5.03314 | opp_overlap 4240247, overlap 4240249 GCGACCTGCAAAAAA TGGCGCGC CAG GCGCGGAA TATCCTCACGGCGCT glnL 4242275 - 4241226 - | nitrogen regulation protein NR TERM 5524 4241634 - 4241618 - G 70 -10.1 -3.31322 | opp_overlap 4241616 CGTAATCGCGGATAA GCCGGAC ATT ATCCGGC AGTTCCATCGACACC TERM 5525 4241821 - 4241847 + g 80 -4.9 -5.02715 | overlap 4241822 TTGCTGAGTAGCTGC GCCGCGCCGCG CAGGC CGCCGAGCGGA TTTTTGATTTCGTGT TERM 5526 4242388 - 4242371 - R 100 -11.3 -5.24129 | TTGGTGGAGAAAAAA GCCCATC CTGG GATGGGC TGAAAGTTTCCACGG glnA 4243959 - 4242550 - | glutamine synthetase TERM 5527 4243172 - 4243182 + g 70 -6.8 -4.13945 | CCAGAACCGTTATCG CCGA ACA TCGG TTTTGGCATAAAGGT typA 4244335 - 4246158 + | GTP-binding protein TypA TERM 5528 4246206 - 4246181 - T 80 -6.1 -4.87665 | gap 1, opp_overlap 4246182, overlap 4246182 TCTTACGGATAAAAA CCCTGCCGAAAT GAA AGCTCGGC-GGG TTTTTTTTATTCACG TERM 5529 4246182 - 4246206 + T 100 -6.4 -6.09888 | opp_overlap 4246181 4246182 CTTACGGATAAAAAC CCTGCCGA AATGAAAGC TCGGCGGG TTTTTTTTATTCACG SeD_A4398 4246947 - 4246213 - | hydrolase, Cof family TERM 5530 4246263 - 4246250 - G 78 -2.3 -5.16237 | overlap 4246251 AAGGTTACCAAAAAA TCAGC AATC GCTGG CGTATTATGCCGACC SeD_A4399 4247810 - 4246932 - | putative inner membrane protein TERM 5531 4247679 - 4247693 + g 84 -3.4 -5.37345 | opp_overlap 4247669, overlap 4247668 AACCATGCGCCATAG CGCGGC TTC GTCCCG TTTTTTATCGTTACG SeD_A4401 4249924 - 4249049 - | putative membrane-associated metal-dependent hydrolase TERM 5532 4249333 - 4249368 + g 70 -5.4 -4.45485 | gap 1, opp_overlap 4249333 CGATATTGATATACA TCATGACCGGTTG-GCT GCC AGCACGTTCGGCCATGA TTTTCTGGATATAAT TERM 5533 4249518 - 4249542 + g 72 -2.1 -4.91459 | opp_overlap 4249512 CCGCCAATACAGATG GTCTGGTAG CCTTTAT TTTCCAGAC TTTTTATCCATGTTG SeD_A4402 4250903 - 4249917 - | putative periplasmic protein TERM 5534 4250710 - 4250698 - G 76 -3.4 -5.00884 | ATGTTCTGCAAAAAA TGGA TATAG TCCA GACCGATCGCGTTTA SeD_A4403 4251803 - 4250955 - | putative cytoplasmic protein TERM 5535 4251925 - 4251905 - R 72 -10.4 -2.80195 | opp_overlap 4251905, overlap 4251902 ATTCAGGATGAATGA GCGGGCAG AACAA CTACCCGC TGTGATGCAGATTCG SeD_A4404 4252652 - 4251960 - | porin OmpL TERM 5536 4252193 - 4252176 - G 70 -2.8 -4.81863 | AAAGGTATAAGAAAA TTTATC GGTAAT GATAAA ATTCCAATAGTTACC uidB 4254141 - 4252720 - | glucuronide carrier protein TERM 5537 4253688 - 4253701 + g 72 -3.7 -4.77036 | overlap 4253669 4253689 ATGCGGCGAGCTGGG CCCGC TCAT GCGGA TTTTTGGTAATAGCG TERM 5538 4254152 - 4254175 + r 78 -5.2 -5.00467 | opp_overlap 4254157, overlap 4254157 GACATAATCGCCTCT CAAAACGCCC CGCA GGGCGTTATA TTTTATTGTTGTTAA TERM 5539 4254170 - 4254157 - R 83 -9.5 -4.08064 | opp_overlap 4254152 4254157 AATCGCCTCTCAAAA CGCCC CGCA GGGCG TTATATTTTATTGTT TERM 5540 4254157 - 4254170 + r 83 -9.5 -4.12416 | opp_overlap 4254157, overlap 4254152 AATCGCCTCTCAAAA CGCCC CGCA GGGCG TTATATTTTATTGTT SeD_A4406 4255569 - 4254187 - | inner membrane symporter YihP TERM 5541 4255203 - 4255217 + g 71 -4.2 -4.62336 | opp_overlap 4255201 4255203 4255198, overlap 4255204 ACAGCATAAACAGCA TCGTTG CGA CGACGG TTTTTCCCGTCACCT TERM 5542 4255580 - 4255612 + r 71 -9.8 -3.1577 | gap 1, overlap 4255578 4255582 CTCATTATTCTTCTC CATCT-GCCCGCAGG TTTC CCTGCGGGCGAGCCG TATTAGATATTCCGT SeD_A4407 4257651 - 4255615 - | alpha-glucosidase YihQ TERM 5543 4255651 - 4255641 - G 76 -3.2 -5.04356 | GTAAAGAAGCAAAAA GTGA AGC CCAC TCGCTCTTCGCGCGA TERM 5544 4256385 - 4256398 + g 70 -9.5 -3.31461 | CGTTATGCATGATCT CGGCG CTGA CGCCG TTGTGCAGATACGTG TERM 5545 4257126 - 4257136 + g 71 -8.2 -3.83347 | overlap 4257124 AGGTCCAGTAATAGT CGCC GCC GGCG TTCTCTTTACAGTCT SeD_A4408 4258537 - 4257695 - | aldose-1-epimerase family protein TERM 5546 4258241 - 4258213 - G 78 -6 -4.83169 | gap 1, opp_overlap 4258213, overlap 4258199 4258215 AGGGCGGCAGAAAAA TC-GTTAGCGACG CTTC CGTCGCCGACTGA TAATTAATCTGCCAG SeD_A4409 4259797 - 4258556 - | N-acylglucosamine 2-epimerase TERM 5547 4258944 - 4258908 - G 71 -4.9 -4.57755 | ACTGAGTAGACAAAA CCGTCTGCGCCATCTGG CGC CCAGGCGTCGCGGATAG TGGCATGGAACAGAC SeD_A4410 4260691 - 4259813 - | deoxyribose-phosphate aldolase TERM 5548 4260502 - 4260488 - G 74 -10 -3.7511 | CTGGCGATAACAGAA CTGCTG ATC CAGCAG AACGGCAGAGGCATA SeD_A4411 4261610 - 4260714 - | 3-hydroxyisobutyrate dehydrogenase family protein SeD_A4412 4261717 - 4261598 - | hypothetical protein TERM 5549 4262458 - 4262444 - g 89 -9.2 -4.57341 | AACTGGTTGGAAAAA GCGGCG GTA CGCCAC CAACCGGGTTTTACC SeD_A4413 4261775 - 4262671 + | kinase, PfkB family TERM 5550 4262976 - 4262957 - g 89 -3.4 -5.48063 | ACGCAAGAGAAAAAA GCCATTGC GGAA GCCGTGGC TGACTATATTCCGGA SeD_A4414 4262705 - 4263508 + | glycerol-3-phosphate regulon repressor TERM 5551 4263572 - 4263598 + F 79 -8 -4.3821 | overlap 4263573 AAAACGGCGCTGTGA TGCAGGCGATAT TGA ACATCGTCTGCG TTTCTATTGTCTTTT yihX 4263699 - 4264298 + | phosphatase YihX rbn 4264292 - 4265164 + | tRNA-processing ribonuclease BN TERM 5552 4265446 - 4265473 + G 71 -7.6 -4.01564 | gap 1, opp_overlap 4265435 CCAAGCTTTTCCGGC GGGGCTGCGC-CG GAT CGCGCGCAGGCGC TTTATGAATATTTTG dtd 4265161 - 4265598 + | D-tyrosyl-tRNA(Tyr) deacylase SeD_A4418 4265595 - 4266584 + | acetyltransferase, gnat family SeD_A4419 4267027 - 4266599 - | Sea41 SeD_A4420 4267353 - 4267042 - | Sea40 TERM 5553 4267427 - 4267373 - R 84 -10.2 -3.96624 | opp_overlap 4267372 TAGTTCCATTACAAA GTTTTCAACCTGAAAACAATTTAGCG CAA CGTTATCCAGTTTTCAAGTTGAAAAC AAAATTGAATTTTAG SeD_A4421 4268368 - 4267439 - | acetyl esterase SeD_A4423 4268795 - 4268562 - | hypothetical protein TERM 5554 4268743 - 4268728 - GH 74 -4.6 -4.82901 | overlap 4268729 GCGGCCTGAGAAAAA TGCGCT GGGG AGCGCG AGGCAAAGGAAAGCG SeD_A4422 4268766 - 4268897 + | hypothetical protein SeD_A4424 4268898 - 4269188 + | transcriptional regulator, XRE family fdhE 4270164 - 4269235 - | formate dehydrogenase accessory protein FdhE TERM 5555 4270112 - 4270093 - G 83 -10.7 -3.9461 | opp_overlap 4270093 4270090 TCGGGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG fdoI 4270796 - 4270161 - | formate dehydrogenase-O, gamma subunit fdoH 4271695 - 4270793 - | formate dehydrogenase-O, iron-sulfur subunit TERM 5556 4271486 - 4271510 + g 74 -9.9 -3.63569 | TTTCGCAGTTAAGTC CGCCGGGTTGT CAT ACACCCCGACG TTATTGCCCACTTCA TERM 5557 4271778 - 4271803 + H 81 -3.9 -5.40072 | opp_overlap 4271778 GCATCGCCGACGAAA GGCGTTAACGT ATTG GCGATAAAGCC TTTTTTTGCCACGCC TERM 5558 4272559 - 4272544 - H 79 -9 -4.09864 | overlap 4272548 AGCTACCGGCGAAAA TCCAGC AGCC GCTGGA CGTCGTACCGTCATC TERM 5559 4273960 - 4273950 - H 71 -6.8 -4.03413 | overlap 4273951 ATTGGCGCATAGAAA TCGG CCA CCGA CGCGGTACGCGTGAA TERM 5560 4275293 - 4275280 - g 71 -9.5 -3.53811 | opp_overlap 4275289 TTTATGGGGCTGAAA GCGCG TCGT CGCGC GCTGGCCGGACGCAC fdhD 4274953 - 4275789 + | formate dehydrogenase family accessory protein FdhD TERM 5561 4275967 - 4275985 + T 79 -10.2 -3.55761 | opp_overlap 4275969, overlap 4275969 TACTTCGAACGAAAA AAGCGCCC CTG GGGCGCTC TTTCGACAGTCGCTA TERM 5562 4275983 - 4275969 - T 100 -12.8 -5.26875 | opp_overlap 4275967 4275969 CTTCGAACGAAAAAA GCGCCC CTG GGGCGC TCTTTCGACAGTCGC TERM 5563 4275969 - 4275983 + T 85 -12.8 -3.35597 | opp_overlap 4275969, overlap 4275967 CTTCGAACGAAAAAA GCGCCC CTG GGGCGC TCTTTCGACAGTCGC SeD_A4431 4277088 - 4276057 - | putative inner membrane lipoprotein SeD_A4432 4277136 - 4277270 + | hypothetical protein TERM 5564 4277408 - 4277356 - g 84 -9.1 -4.24726 | gap 2, opp_overlap 4277356 4277363, overlap 4277360 ACAATAATGTTAAAA CCGAGGCGACGCCGGCCGCCAGCAG TCAGC CTGC-GACG-CCAGCGCCTTCTCAG ACGCCGGAAACGCAA TERM 5565 4277395 - 4277360 - g 79 -13.8 -2.76291 | opp_overlap 4277356 4277363, overlap 4277356 TAATGTTAAAACCGA GGCGACGCCGGCCGCC AGCA GTCAGCCTGCGACGCC AGCGCCTTCTCAGAC TERM 5566 4278291 - 4278270 - g 71 -4.3 -4.65933 | overlap 4278271 4278272 GATTTTGAAAAGAAA CGGGTGCAG GACC CTGCAACAG GATGGATGGTTGCGG SeD_A4433 4277271 - 4278371 + | hypothetical protein TERM 5567 4278456 - 4278442 - g 95 -8.5 -5.10208 | opp_overlap 4278442 TAACGCCAATAAAAA GCGCC GATCA GGCGC TTTTTTCGTTCATGT TERM 5568 4278442 - 4278456 + G 100 -8.5 -5.31059 | opp_overlap 4278442 TAACGCCAATAAAAA GCGCC GATCA GGCGC TTTTTTCGTTCATGT SeD_A4434 4278368 - 4278496 + | hypothetical protein TERM 5569 4278552 - 4278541 - T 70 -2.2 -4.9218 | GAGCTATTAGAAAAA CCAG TAAT CTGA AGCTATCACAAGATG SeD_A4435 4279050 - 4278727 - | branched-chain amino acid transport SeD_A4436 4279709 - 4279050 - | AzlC family protein TERM 5570 4280047 - 4280030 - g 79 -3.3 -5.28176 | gap 1 CGCAGGTACAAAAAA CGCAGGTG ATT CGCC-GCG GAGAAGGCACCAAAG SeD_A4437 4279810 - 4280358 + | transcriptional regulator, XRE family TERM 5571 4280445 - 4280409 - T 100 -9.4 -5.49579 | gap 1, overlap 4280410 CGACAAAAAATAAAA CCGTAGGCCCGGTAAGC TTGC GCC-ACCGGGCACACGA CTTACTGCAGATAGA TERM 5572 4280444 - 4280410 - T 84 -10.7 -3.87307 | gap 1, overlap 4280409 GACAAAAAATAAAAC CGTAGGCCCGGTAAGC TTGC GCC-ACCGGGCACACG ACTTACTGCAGATAG rhaU 4280761 - 4280447 - | L-rhamnose 1-epimerase fucO 4281906 - 4280758 - | lactaldehyde reductase TERM 5573 4281020 - 4280972 - G 71 -11 -2.98823 | gap 1 GCTTCGTCAGACATA CCGCGCGTCTCCACGCCCATCGC CTGT GCGATGCGGGCAAA-ACGCGCGA CGGCGTTCGGACGGT rhaD 4282860 - 4282033 - | rhamnulose-1-phosphate aldolase TERM 5574 4282968 - 4282917 - R 90 -13.8 -3.30243 | opp_overlap 4282903 4282901 4282914 4282931 4282962, overlap 4282918 ACGTAGGCCGGATAA GCGCAGCGCCATCCGGCAAT CGTGTCTCATTT ATTGCCGGATGGCGACGCGA GGCGTCTTATCCGGC TERM 5575 4282967 - 4282918 - R 100 -17.3 -2.57931 | opp_overlap 4282903 4282901 4282914 4282931 4282962, overlap 4282917 CGTAGGCCGGATAAG CGCAGCGCCATCCGGCAAT CGTGTCTCATTT ATTGCCGGATGGCGACGCG AGGCGTCTTATCCGG TERM 5576 4282962 - 4282974 + r 70 -9.1 -3.30124 | opp_overlap 4282918 4282917, overlap 4282914 TTATTGCCGGATGGC GACGC GAG GCGTC TTATCCGGCCTACAG rhaA 4284263 - 4283004 - | L-rhamnose isomerase TERM 5577 4283211 - 4283222 + g 100 -7.2 -5.27779 | opp_overlap 4283209, overlap 4283209 GGGTTCCAGCAGAGC GCGC AGCA GCGC TTTTTTCATGTTGCG TERM 5578 4283888 - 4283860 - G 91 -7.3 -4.91511 | opp_overlap 4283860, overlap 4283875 4283876 AGTGGATGAGAAAAA CAGGTGGGGTTGA AAT CCAGCCCCAGCCG GTTCGCTTTCGCCCA rhaB 4285729 - 4284260 - | rhamnulokinase TERM 5579 4286273 - 4286289 + G 76 -10.1 -3.78329 | TGACGAATGTACTGT GGCGTTC ACC GGACGCC TTTCAGTTCCTGGCG SeD_A4443 4286017 - 4286853 + | HTH-type transcriptional activator RhaS TERM 5580 4287838 - 4287805 - g 74 -10.3 -3.55444 | opp_overlap 4287814 TGTTCACGCGGGAAA CCGGGATGACGCC GAGCCAAT GGCGTCATCTCAG TAATCAAAGCGATTA SeD_A4444 4287006 - 4287854 + | HTH-type transcriptional activator RhaR SeD_A4445 4288885 - 4287851 - | L-rhamnose-proton symporter TERM 5581 4288476 - 4288465 - G 75 -3.6 -4.84359 | TCAGCGCGACAAAAA CGCC AAGT AGCG TCATGCGCCCCCCTT SeD_A4446 4288889 - 4289020 + | hypothetical protein SeD_A4447 4289055 - 4289168 + | hypothetical protein TERM 5582 4289317 - 4289300 - f 70 -4.9 -4.40184 | TCAATGAAATATAAA TATAAGG AAAT CCCTATA TTGGCGTTGTTGATG SeD_A4448 4289363 - 4289479 + | hypothetical protein TERM 5583 4289518 - 4289528 + G 76 -5.4 -4.78753 | overlap 4289520 AATGGATTCTGTTAT GAGA AAA TCTC TTTTCTTACTATTAC TERM 5584 4289781 - 4289793 + G 75 -6.9 -4.46212 | AAACCGGTGATGTCG CCTGG CAA CCGGG TTTTGTGCTGGAAAC SeD_A4449 4289516 - 4290187 + | oligogalacturonate-specific porin TERM 5585 4290220 - 4290242 + T 100 -14.2 -5.82316 | TATTTATTCCCTTTT CCGGCTACTT TAT AGGTAGCCGG TTTTTTTTACCTGGT SeD_A4450 4291652 - 4290345 - | trap dicarboxylate transporter, dctm subunit SeD_A4451 4292160 - 4291645 - | trap dicarboxylate transporter, dctq subunit SeD_A4452 4293162 - 4292179 - | trap dicarboxylate transporter, dctp subunit TERM 5586 4293723 - 4293699 - g 87 -2 -5.626 | gap 1, overlap 4293716 CAGCGGACAAAAAAA CCGTGCTGCGT AACA ACGCCGG-CGG TCACGCTAACCACAG sodA 4293491 - 4294111 + | superoxide dismutase TERM 5587 4294134 - 4294151 + F 100 -11.3 -5.71712 | opp_overlap 4294134 TGCACGTCTGTAGAA GCGAGTC TGAT GACTCGC TTTTTTTGTATCCGC TERM 5588 4294151 - 4294134 - f 77 -11.3 -3.29511 | opp_overlap 4294134 TGCACGTCTGTAGAA GCGAGTC TGAT GACTCGC TTTTTTTGTATCCGC SeD_A4454 4294181 - 4294870 + | mosc domain containing protein SeD_A4455 4294882 - 4295277 + | putative inner membrane protein TERM 5589 4295297 - 4295324 + T 100 -9.8 -4.75776 | opp_overlap 4295300, overlap 4295298 4295300 CGACGGCGAGATAAA AAATCGGCCTGC ATTC GCAGGCCGATGG TTTTTAGGTTCGCTT TERM 5590 4295298 - 4295323 + T 86 -13.3 -3.44381 | opp_overlap 4295300, overlap 4295297 4295300 GACGGCGAGATAAAA AATCGGCCTGC ATTC GCAGGCCGATG GTTTTTAGGTTCGCT TERM 5591 4295300 - 4295321 + T 100 -15.9 -3.28592 | opp_overlap 4295300, overlap 4295298 4295297 CGGCGAGATAAAAAA TCGGCCTGC ATTC GCAGGCCGA TGGTTTTTAGGTTCG TERM 5592 4295321 - 4295300 - T 100 -15.9 -5.36441 | opp_overlap 4295300 4295298 4295297 CGGCGAGATAAAAAA TCGGCCTGC ATTC GCAGGCCGA TGGTTTTTAGGTTCG SeD_A4456 4296701 - 4295328 - | sensor protein CpxA TERM 5593 4295643 - 4295658 + g 76 -10.4 -3.76125 | AACTATATTTTCCAG CGCGCT TTCC AGCGCG TTTGGGTTGCCATAG cpxR 4297396 - 4296698 - | transcriptional regulatory protein CpxR TERM 5594 4297583 - 4297593 + G 76 -3.2 -5.00616 | GTTATGGCCTCAACG CTGG CAT TCAG TTTTTTAAGCCACGC TERM 5595 4297834 - 4297824 - g 71 -8.2 -3.79623 | AAAAATTTGATGAAA GCGC TGT GCGC GCTCAGGCAGAAAAA SeD_A4458 4297547 - 4298047 + | periplasmic repressor TERM 5596 4298087 - 4298105 + F 100 -14.6 -6.02914 | CACCATCCCTGTCTT CCCCCACA TGA TGTGGGGG TTTTTTTTATCTCCA fieF 4298195 - 4299097 + | cation-efflux pump FieF TERM 5597 4300012 - 4299997 - g 72 -2.4 -4.89063 | overlap 4299999 TTATTGAAAAAGAAA CGGGCC GTGA GACGCG TGCGACGGTGCTCGG pfkA 4299282 - 4300244 + | 6-phosphofructokinase TERM 5598 4300912 - 4300890 - g 74 -6.9 -4.24002 | opp_overlap 4300890 CGCCAAACCCGAAAA GCTCCGGCG GCGCA CGCTGGAAC TATCTGGCGGCATGG SeD_A4461 4300448 - 4301437 + | sulfate-binding protein TERM 5599 4301450 - 4301474 + F 100 -15.1 -5.63517 | opp_overlap 4301450 TAAACCGTTTATAAA CCCGGTAACGT ATT ATGTTACCGGG TTTTTTCTTTGCCAC TERM 5600 4301474 - 4301450 - f 95 -12.9 -3.88583 | opp_overlap 4301450 TAAACCGTTTATAAA CCCGGTAACGT ATT ATGTTACCGGG TTTTTTCTTTGCCAC TERM 5601 4302330 - 4302358 + F 81 -13.3 -2.72799 | overlap 4302326 CATTATCTTATTGAT TCTTATCCCGGTT TAA AACTGGGGTAAGA TCGTGTCTATAAAAA TERM 5602 4302432 - 4302374 - f 73 -4.4 -4.82901 | gap 3, opp_overlap 4302384 4302393, overlap 4302376 4302383 4302384 4302393 TCGTGTCTATAAAAA TATGTGAAACCCATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGAT-GGTT-CGT-TA CACTCTCTTCATAGC TERM 5603 4302434 - 4302376 - f 100 -15.1 -4.03995 | gap 1, opp_overlap 4302384 4302393, overlap 4302374 4302383 4302384 4302393 GTGTCTATAAAAATA TGTGA-AACCCATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGGTTCGTTACA CTCTCTTCATAGCCT TERM 5604 4302426 - 4302383 - f 100 -20 -3.73294 | opp_overlap 4302384 4302393, overlap 4302374 4302376 4302384 4302393 TAAAAATATGTGAAA CCCATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGGT TCGTTACACTCTCTT TERM 5605 4302384 - 4302425 + F 100 -23.5 -3.37053 | opp_overlap 4302383 4302374 4302376 4302384 4302393, overlap 4302393 AAAAATATGTGAAAC CCATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGG TTCGTTACACTCTCT TERM 5606 4302425 - 4302384 - f 100 -23.5 -2.82892 | opp_overlap 4302384 4302393, overlap 4302383 4302374 4302376 4302393 AAAAATATGTGAAAC CCATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGG TTCGTTACACTCTCT TERM 5607 4302416 - 4302393 - f 91 -11.2 -4.33165 | opp_overlap 4302393 4302384, overlap 4302384 4302383 4302374 4302376 TGAAACCCATCAAAA GATATAAAGG TATA CCTTTATATC TTTTGATGGTTCGTT TERM 5608 4302393 - 4302416 + F 91 -11.2 -4.37013 | opp_overlap 4302384 4302383 4302374 4302376 4302393, overlap 4302384 TGAAACCCATCAAAA GATATAAAGG TATA CCTTTATATC TTTTGATGGTTCGTT gph 4302557 - 4303891 + | sugar (Glycoside-Pentoside-Hexuronide) transporter TERM 5609 4304084 - 4304094 + G 78 -6.8 -4.59773 | overlap 4304069 TGACGCCGGTCGCTT CCTG CGC CAGG TTTTTCAGGATAACG SeD_A4464 4303902 - 4304861 + | fructokinase SeD_A4465 4304871 - 4305911 + | ADP-ribosylglycohydrolase family protein TERM 5610 4306317 - 4306296 - g 81 -12.3 -3.55563 | gap 1 ACCGTATTCTGGAAA TCGCGC-CGC GCC GCGCGCGCGA CGCTCAGGCAGACGG SeD_A4466 4305974 - 4306696 + | putative regulatory protein, GntR family SeD_A4469 4307551 - 4307201 - | polyketide synthesis domain protein SeD_A4470 4309115 - 4307565 - | carbohydrate kinase, FGGY family TERM 5611 4308954 - 4308972 + g 89 -8.9 -4.57569 | opp_overlap 4308954 4308965 TGCCTGACGGATACA CTGGCAA GCCAG TTGCCAG TTTTTGGCAAGATCA TERM 5612 4309030 - 4309003 - G 76 -12.8 -2.7556 | gap 1, overlap 4309000 4308991 AACTCCATCGAACCA GGCA-CATCCGGC ACG GCCAGATGCTGCC ATTCCGCTTGACCGA SeD_A4471 4310203 - 4309244 - | putative sugar-binding domain protein SeD_A4473 4310474 - 4310331 - | hypothetical protein TERM 5613 4310924 - 4310942 + GH 72 -8.8 -3.56142 | overlap 4310938 AATTATGCGCGGCTT GATGCGCG ACT CGCGAATC TTAATTCTTGATGAG TERM 5614 4311800 - 4311830 + GH 75 -6.2 -4.49958 | gap 1 TTATCAGCTGTTGCG CAGTATCGCG-CA ACAAAA TGTCGCGGTGCTG TTTATTTCCTCCGAT SeD_A4472 4310460 - 4311995 + | putative ABC transporter ATP-binding protein ego SeD_A4474 4311989 - 4313032 + | inner membrane ABC transporter permease protein YdeY SeD_A4475 4313032 - 4314030 + | inner membrane ABC transporter permease protein YdeZ TERM 5615 4314531 - 4314509 - g 73 -9.2 -3.88291 | opp_overlap 4314511 4314515, overlap 4314511 4314515 CATCAGGTGGACAAA GAGAAAGCGA AAG TCGCTTTCTT CTATTCCAGCCCAAC TERM 5616 4314529 - 4314511 - g 81 -11.8 -3.52906 | opp_overlap 4314511 4314515, overlap 4314509 4314515 TCAGGTGGACAAAGA GAAAGCGA AAG TCGCTTTC TTCTATTCCAGCCCA TERM 5617 4314511 - 4314529 + G 83 -11.8 -3.65812 | opp_overlap 4314511 4314509 4314515, overlap 4314515 TCAGGTGGACAAAGA GAAAGCGA AAG TCGCTTTC TTCTATTCCAGCCCA TERM 5618 4314525 - 4314515 - g 75 -6.8 -4.40003 | opp_overlap 4314511 4314515, overlap 4314511 4314509 GTGGACAAAGAGAAA GCGA AAG TCGC TTTCTTCTATTCCAG TERM 5619 4314515 - 4314525 + G 75 -6.8 -4.46073 | opp_overlap 4314515 4314511 4314509, overlap 4314511 GTGGACAAAGAGAAA GCGA AAG TCGC TTTCTTCTATTCCAG SeD_A4476 4314038 - 4315081 + | hypothetical protein SeD_A4477 4315110 - 4315985 + | deoxyribose-phosphate aldolase SeD_A4478 4316029 - 4316358 + | LsrG protein SeD_A4479 4316368 - 4317132 + | ribulose-phosphate 3-epimerase tpiA 4317991 - 4317224 - | triosephosphate isomerase TERM 5620 4317430 - 4317463 + g 81 -11.7 -3.57263 | opp_overlap 4317429 4317428 GGTCACGGATGAATT TGTGCACTGCCTGCG CCTG CGCAGGCGTTGCAGA TTTACCGGTACCGAT SeD_A4481 4318700 - 4318104 - | hypothetical protein SeD_A4482 4318801 - 4319229 + | putative inner membrane protein SeD_A4483 4320081 - 4319335 - | ferredoxin--NADP reductase TERM 5621 4320157 - 4320136 - R 73 -10.9 -2.74122 | overlap 4320135 4320133 CGTCAGGAGAAAGAT TTCCAGCCC CGCG AGGCTGGAA GGCTCTAACTAACAA glpX1 4321188 - 4320178 - | fructose-1,6-bisphosphatase, class II TERM 5622 4320440 - 4320454 + g 74 -4.9 -4.70169 | overlap 4320441 4320448 CGCGCCAGTTCCTGT TCGCC AATGC GGCGG TTTTCTTCGCTGTCG TERM 5623 4321081 - 4321099 + g 72 -3.7 -4.83169 | opp_overlap 4321067, overlap 4321083 ACGCATGGCGTTGAC CGCCGCG CCGTC CGCGGTA TTTTTATCGCCGCGT TERM 5624 4321083 - 4321097 + g 74 -8.5 -4.03995 | opp_overlap 4321067, overlap 4321081 GCATGGCGTTGACCG CCGCG CCGTC CGCGG TATTTTTATCGCCGC TERM 5625 4321252 - 4321281 + r 79 -9.3 -4.09685 | opp_overlap 4321252 4321249, overlap 4321264 GGAGGGAATAATTGA TGTGTGTGCGGAG TTGC CTCCGCACAAAGA TTTTGCCGGATGGCG glpK 4322808 - 4321300 - | glycerol kinase glpF 4323674 - 4322829 - | glycerol uptake facilitator protein TERM 5626 4323834 - 4323847 + H 70 -9.5 -3.04398 | opp_overlap 4323824, overlap 4323833 AAAATGAGCGTTATC GCGCC ATGA GGCGC ATTTTGAGACAGCAG SeD_A4487 4324073 - 4324312 + | hypothetical protein SeD_A4488 4324537 - 4324397 - | hypothetical protein TERM 5627 4324532 - 4324503 - G 78 -13.7 -2.60808 | opp_overlap 4324510, overlap 4324510 ATCAGCGACAACGCA TAAAAAAGGCGCC TTAC GGCGCCTTTTTTG ATCACTCGATATCAA TERM 5628 4324510 - 4324525 + g 100 -11.8 -5.1675 | opp_overlap 4324510 4324503 ACAACGCATAAAAAA GGCGCC TTAC GGCGCC TTTTTTGATCACTCG TERM 5629 4324525 - 4324510 - G 100 -11.8 -5.3236 | opp_overlap 4324510, overlap 4324503 ACAACGCATAAAAAA GGCGCC TTAC GGCGCC TTTTTTGATCACTCG rraA 4325019 - 4324534 - | regulator of ribonuclease activity A menA 4326041 - 4325112 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 5630 4326077 - 4326060 - R 100 -11.3 -5.07486 | opp_overlap 4326047 TAGCGCCAATAAAAA TGGGGCT TTTC AGCCCCA TCAACAGTGATGAAA hslU 4327439 - 4326108 - | heat shock protein HslVU, ATPase subunit HslU TERM 5631 4326939 - 4326953 + g 74 -2.1 -5.00884 | gap 1 CTCTTTATCGTCGAG CTG-GC CTTC GCGCAG TTTTTTGCGGAACGT TERM 5632 4327070 - 4327083 + g 80 -5.2 -4.87665 | CTTCCGCCAACTCTT CCGC ACGATA GCGG TTTTTCTCGATAGCC hslV 4327979 - 4327449 - | ATP-dependent protease HslV ftsN 4329045 - 4328071 - | cell division protein FtsN TERM 5633 4328133 - 4328143 + g 74 -3.2 -4.96468 | TCAGACGGTTAATGG TGCT GTC GGCA TTTTCTTTACCTTTC TERM 5634 4328333 - 4328355 + g 70 -6.8 -4.11216 | overlap 4328349 GCCTTCGGCGCTTCA GGCGCGCGCG TAA TGGGCGCGGC TTTTGGCGCTGCCGC TERM 5635 4328552 - 4328582 + g 79 -11 -3.75437 | overlap 4328553 4328565 GTTTGAGCCCACTGC TGCTGCTGCGCCTG ACG CTGGCGCTGTAGCG TTTGCTGGCGTCGTT TERM 5636 4328553 - 4328581 + g 72 -12.3 -2.8478 | overlap 4328552 4328565 TTTGAGCCCACTGCT GCTGCTGCGCCTG ACG CTGGCGCTGTAGC GTTTGCTGGCGTCGT cytR 4330164 - 4329139 - | transcriptional repressor CytR TERM 5637 4329280 - 4329266 - G 80 -9.2 -4.20696 | opp_overlap 4329265 4329266 CGACCAATGTCAAAA CGCGGC TGC GCCACG GTTGTCAACGGAGGG SeD_A4495 4332517 - 4330319 - | primosomal protein N' TERM 5638 4331624 - 4331636 + g 74 -4.7 -4.81249 | opp_overlap 4331597 4331624 CGTGCCGATGACAAT CGCCG CTT CGCCG TTTTTCGCTTTCAGC TERM 5639 4332806 - 4332791 - g 71 -6.1 -4.28361 | GTAATGTTATCAAAA CCCAC TCTACC GTGGG GCACGACCTGAACCT rpmE 4332721 - 4332933 + | ribosomal protein L31 TERM 5640 4332944 - 4332973 + T 100 -12.3 -4.38712 | opp_overlap 4332952, overlap 4332952 4332972 AATAAGTTACCGCCA GAAAAAAAGCGCC GCAG GGCGCTTTTTTTG TTTTCTAGGGATAAC TERM 5641 4332965 - 4332952 - T 100 -9.5 -5.61596 | opp_overlap 4332944 4332952 ACCGCCAGAAAAAAA GCGCC GCAG GGCGC TTTTTTTGTTTTCTA TERM 5642 4332952 - 4332965 + T 100 -9.5 -6.14618 | opp_overlap 4332952, overlap 4332944 ACCGCCAGAAAAAAA GCGCC GCAG GGCGC TTTTTTTGTTTTCTA SeD_A4497 4333640 - 4332978 - | hypothetical protein TERM 5643 4333796 - 4333819 + rH 100 -16.8 -4.71222 | opp_overlap 4333794 TACGTTTTAACCATT CAGGCGGAAG TTAG CTTCCGCCTG TTTTACTTTTACTAT SeD_A4498 4335631 - 4333841 - | arylsulfotransferase TERM 5644 4333998 - 4333966 - GH 77 -10.6 -3.36327 | opp_overlap 4333963, overlap 4333972 TGACTTCATCCAGAA CGGAAACGATCGGT TTTGT ACCGCTCATTCCCG CTGTGGCCGAGTACA TERM 5645 4334751 - 4334768 + gH 74 -2.1 -5.07652 | gap 1, overlap 4334743 4334754 GTATTGATGGTGTAT TTA-CCAT TTA ATGGATAA TTTTCTTTTGCGACA SeD_A4499 4335516 - 4335677 + | hypothetical protein TERM 5646 4336078 - 4336052 - TR 83 -6.5 -5.055 | opp_overlap 4336052 4336053, overlap 4336053 4336054 GGAATCGTTAAAAAA GCGCGGCCAGA GGCGT TCTGACCGCAT GCTTTGCTATCAGTA TERM 5647 4336077 - 4336053 - TR 75 -10 -3.62577 | opp_overlap 4336053 4336052, overlap 4336052 4336054 GAATCGTTAAAAAAG CGCGGCCAGA GGCGT TCTGACCGCA TGCTTTGCTATCAGT TERM 5648 4336076 - 4336054 - TR 74 -11.3 -2.76823 | opp_overlap 4336053 4336052, overlap 4336053 4336052 AATCGTTAAAAAAGC GCGGCCAGA GGCGT TCTGACCGC ATGCTTTGCTATCAG metJ 4336405 - 4336088 - | met repressor metB 4336670 - 4337830 + | O-succinylhomoserine (thiol)-lyase TERM 5649 4338876 - 4338859 - g 81 -8.3 -4.25074 | GACCAAATTTTAAAA CGGGCGC AGGC GCGTCCG CTGGCAGTGGGCGTG TERM 5650 4339362 - 4339386 + G 86 -12.2 -3.78775 | opp_overlap 4339358 4339357, overlap 4339365 GAATTATGAAGGGCT GGATGCCAGC CGCGC GCTGGCATTC TTTGATGATGAAGCC TERM 5651 4339365 - 4339383 + G 83 -10.3 -4.0274 | opp_overlap 4339358 4339357, overlap 4339362 TTATGAAGGGCTGGA TGCCAGC CGCGC GCTGGCA TTCTTTGATGATGAA metL 4337833 - 4340265 + | aspartokinase/homoserine dehydrogenase II SeD_A4503 4341238 - 4340381 - | MscS Mechanosensitive ion channel SeD_A4504 4342239 - 4341241 - | hypothetical protein TERM 5652 4342611 - 4342597 - H 79 -8.5 -4.2123 | TAGCCAGGTAACAAA GCGGC GACTA GCCGC CAGATTAACGGCGAC TERM 5653 4344709 - 4344693 - g 77 -3.6 -5.06414 | CGGCTGGAACAAAAA GCTCGA TAAAG TCGTGC AGCAAACGGTGGCGC TERM 5654 4344781 - 4344796 + G 87 -8.2 -4.56597 | overlap 4344755 TCGCTGGGGAATCTG GCGGCG GATG CGCTGC TTTTTACGGCGGGGA SeD_A4507 4343734 - 4345290 + | 5'-Nucleotidase domain protein TERM 5655 4345327 - 4345358 + F 74 -10.9 -2.77899 | overlap 4345324 ATGGCCTTTAGCGCA TTCAGGCCGGACG GCGGTA TGTCTGGCCTGGA TCATTCGTGGACCGC TERM 5656 4345771 - 4345796 + G 71 -10.3 -3.18274 | opp_overlap 4345770 4345769, overlap 4345755 ATGCTGGCGATAACC CGCGCGCAGCA ACTT TTCGGCGCGCG TTACGTTAACGTGCA TERM 5657 4346301 - 4346319 + G 71 -10.2 -3.17219 | CAGCGCCATCTTTCC CGGCTTGC AGG GCGGGCCG TTGATGCACGTTATC TERM 5658 4346371 - 4346344 - g 71 -9.8 -3.53811 | opp_overlap 4346343 4346340 4346339 GTTATCGCGGCTAAA GCGGTGGCGCTT GGCG AAGCGCTACAGC CTGAATTTAAACGTT glyA 4345555 - 4346793 + | serine hydroxymethyltransferase TERM 5659 4346894 - 4346869 - Tf 71 -7.4 -3.86944 | TTGACAATTATCAAA CGCTGGCGCG CCATGT CGCCCCCGCG CAATGCGGCGCAGTA TERM 5660 4347061 - 4347084 + TF 73 -7.4 -4.15044 | gap 1, opp_overlap 4347026 TGGTGTTGCTTAATG GCGTCAT-GCC GCA GGCGATGCCGC TTTGTTGCGCGCAAC TERM 5661 4347237 - 4347252 + TF 74 -6 -4.57073 | opp_overlap 4347234, overlap 4347238 ACGCCGGAGCAACTG GCGCGG CTGG CCGCGA TTTTTCGCCAGCGTG TERM 5662 4347238 - 4347251 + TF 73 -9.5 -3.33922 | opp_overlap 4347234, overlap 4347237 CGCCGGAGCAACTGG CGCGG CTGG CCGCG ATTTTTCGCCAGCGT SeD_A4510 4349322 - 4347841 - | transcriptional regulator, GntR family TERM 5663 4347954 - 4347992 + gF 79 -11 -3.34398 | gap 1, overlap 4347949 4347955 GCAGCCAGCCCGTGG GCG-CGGGGTGCGTCAG CCAGAA CTGGCGCATCCCGGCGA TGTTTAACCCGGCCC TERM 5664 4347955 - 4347991 + gF 86 -14.5 -2.60496 | gap 1, overlap 4347954 4347949 CAGCCAGCCCGTGGG CG-CGGGGTGCGTCAG CCAGAA CTGGCGCATCCCGGCG ATGTTTAACCCGGCC SeD_A4509 4349288 - 4349491 + | hypothetical protein metF 4349601 - 4350491 + | 5,10-methylenetetrahydrofolate reductase TERM 5665 4350498 - 4350513 + F 87 -10.4 -4.1711 | opp_overlap 4350492 GGTTTATAACCTCCA GCTCCC TGCC GGGAGC TTTATTACACCTCAT TERM 5666 4350927 - 4350948 + G 70 -3 -4.71791 | gap 1 AACCGTGGTGGCCCG CCGAC-TGG GGCAG CTATGTCGG TTTGTTTATTCGTAT TERM 5667 4351311 - 4351298 - g 83 -9.5 -4.08692 | opp_overlap 4351307 GAAGCGCTGGCAAAA GCGCC GCTG GGCGC GACCGAGATGGGCCT katG 4350656 - 4352836 + | catalase/peroxidase HPI TERM 5668 4352852 - 4352883 + T 100 -15.2 -4.17491 | overlap 4352876 TCTGATAGGTTAATT CGTCAGCGGCTGCT ATTC GGTAGTCGCTGACG TTTTCCGCGTTTAAT SeD_A4513 4353517 - 4352894 - | NADH:ubiquinone oxidoreductase, na TERM 5669 4353610 - 4353588 - R 73 -2 -5.24129 | opp_overlap 4353588, overlap 4353606 4353608 GTGCGTGATAAAAAA GTCTATTTCA GGA CAAAATGGAC TGATTCCAGGCTATG TERM 5670 4353741 - 4353764 + r 86 -14 -3.15758 | opp_overlap 4353741, overlap 4353733 GTCAGCAAGCTGAAA TACTCCTGAC TATC GTCAGGAGTA TTGCTCAGACCTTAT TERM 5671 4353764 - 4353741 - R 100 -14 -3.67976 | opp_overlap 4353741 4353733 GTCAGCAAGCTGAAA TACTCCTGAC TATC GTCAGGAGTA TTGCTCAGACCTTAT SeD_A4514 4354879 - 4353776 - | glycerol dehydrogenase TERM 5672 4354221 - 4354231 + g 81 -6.8 -4.70626 | overlap 4354212 ACGTGCTGTTCGGCG GCCA ACA TGGC TTTTTCGCCTTCTTC fsaB 4355553 - 4354891 - | fructose-6-phosphate aldolase 2 TERM 5673 4355400 - 4355410 + g 77 -8.2 -4.09685 | opp_overlap 4355392, overlap 4355392 ATAAAGTGCCTTCTT CGCC GAT GGCG TTTTGCAGCCTGGGC SeD_A4516 4358053 - 4355564 - | multiphosphoryl transfer protein 2 TERM 5674 4356899 - 4356949 + g 87 -13.8 -3.18264 | overlap 4356884 4356944 4356946 TTGCGCCTCGACGGA GTGCGCGATGTTGGCGGCGACCTC CAT GCGGATGCCGTCAGCGGTGCGCGC TTCCTGGGTCAGCCA TERM 5675 4357197 - 4357209 + g 73 -6.3 -4.42788 | opp_overlap 4357197 CTTTTTAACAGCAGA CCTTT GAG AAAGG TTTTATCCAGTTCGA TERM 5676 4357909 - 4357920 + g 74 -7.2 -4.1196 | opp_overlap 4357909, overlap 4357892 4357899 4357895 TGTCGGTGCCAATCA GCGC CAGC GCGC TTTTGGCGCTGCCTT TERM 5677 4358235 - 4358245 + H 70 -2.4 -4.93898 | TTTCAGAAGTTATGA AGCG GAT CGCA TTTTTATACTGATAT SeD_A4517 4358374 - 4359453 + | PTS system, fructose family, IIC component SeD_A4518 4359468 - 4359788 + | PTS system, fructose family, IIB component TERM 5678 4359811 - 4359844 + F 72 -10.3 -2.91593 | opp_overlap 4359798, overlap 4359810 ATGCCCGATGGCGCA AGTTTATCGGGCCTG CTCA CAGGCCCGATAAGAG ATTTATGCCGCCATC TERM 5679 4360010 - 4360030 + GF 73 -10.4 -3.00476 | gap 1 GAACCGGTCATTTTG CGCCG-CGC CAAA GCGACGGCG TATATCCTTGAACAT SeD_A4519 4359887 - 4362184 + | formate C-acetyltransferase 2 TERM 5680 4362607 - 4362631 + GF 79 -12.2 -2.80994 | gap 1, opp_overlap 4362607 CTTGTGCTATTGAAA CGGCTGG-CGA TACG TCGGCCAGCCG TCTACTGCCGTTGGC TERM 5681 4362631 - 4362607 - gf 88 -12.2 -3.64703 | gap 1, opp_overlap 4362607 CTTGTGCTATTGAAA CGGCTGG-CGA TACG TCGGCCAGCCG TCTACTGCCGTTGGC TERM 5682 4362761 - 4362784 + GF 83 -10.4 -3.69434 | gap 1, overlap 4362765 ACGGTTACTGGTTAG CGAGGGAATCA CGG TGA-TCCCTCG TTTGCCGTTGATTCC TERM 5683 4362879 - 4362866 - gf 81 -8.1 -4.27441 | ATCATTAGGAATAAA GCAGG TTCA CCTGC TACCGTTTCATCAGT SeD_A4520 4362150 - 4363028 + | pyruvate formate-lyase 2-activating enzyme SeD_A4521 4363030 - 4363383 + | PTS system, Fru family, IIB component SeD_A4522 4364221 - 4363370 - | transcriptional regulator, AraC family protein TERM 5684 4364301 - 4364313 + r 77 -10.5 -3.30124 | opp_overlap 4364286, overlap 4364290 TTATTGCCGGATAGC GGCGC TTT GCGCC TTATCCGGACTACGG SeD_A4523 4366115 - 4364382 - | membrane protein YijP TERM 5685 4366305 - 4366317 + r 84 -7.7 -4.74103 | overlap 4366284 CCCACATAACTGCGT GAGAG CGG CTCTC TTTTTGCGTTAGCCG ppc 4368977 - 4366326 - | phosphoenolpyruvate carboxylase TERM 5686 4367699 - 4367719 + g 82 -11.1 -3.78775 | opp_overlap 4367695, overlap 4367687 GGATCAGGAAGGCCT GCTTGTCGG CTT CCGACCAGC TTTCGTAGTCGCCAA TERM 5687 4368684 - 4368695 + g 74 -7.2 -4.08945 | overlap 4368685 4368686 4368689 CACTTCCGGGTTGCT GGCG GCTT CGCC TTTTGGCGAAATGCT TERM 5688 4369160 - 4369142 - R 71 -7.4 -3.85698 | opp_overlap 4369141 GCCGTCTTTTATAAA GCCACG TAAAACC CGTGGC GTCAATTACTGCGAA argE 4370497 - 4369346 - | acetylornithine deacetylase TERM 5689 4369528 - 4369540 + g 74 -2.7 -4.94902 | overlap 4369529 TCACCACGTCGGTTT TTGTT CCC AACAG TTTTTCTACTACTTC argC 4370586 - 4371590 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 5690 4371811 - 4371784 - g 75 -4 -4.89063 | gap 1, opp_overlap 4371804, overlap 4371786 CCAGTGAAAAAGAAA GA-CGGCCTGCGC GTG ACGCCTGCCGATC AGATTGGCATCATTA TERM 5691 4371961 - 4371930 - g 70 -8.7 -3.63627 | TGGCGACAGCGTAAA CGTGACCCAACTC GATGAA GCGTTAGGCCACG TCGGGCTGGCGCAAC argB 4371601 - 4372374 + | acetylglutamate kinase TERM 5692 4372815 - 4372797 - g 87 -8.1 -4.57569 | TCAGTTGGGTAAAAA GCTGCAC ACCGG GCGCAGC CGTAACGATCAGGTG argH 4372492 - 4373868 + | argininosuccinate lyase TERM 5693 4373901 - 4373928 + F 91 -8.2 -5.00616 | opp_overlap 4373899 CTATCAGGTAATACT GCCCGGCCGAGC ATCA GCGACGCCGGGC TTTTTTACGCAAAAA TERM 5694 4373963 - 4373947 - f 100 -13.7 -5.81412 | TTTACGCAAAAAAAA GCGGACC AGA GGTCCGC AAAAGTTCACGTTGG oxyR 4374152 - 4375069 + | hydrogen peroxide-inducible genes activator sthA 4376464 - 4375052 - | soluble pyridine nucleotide transhydrogenase TERM 5695 4376112 - 4376100 - G 71 -4.7 -4.63218 | opp_overlap 4376106, overlap 4376101 TGTTCGTCAATAAAA TGGGC GTT GCCCT GCAATATTTCACAGT SeD_A4533 4377302 - 4377661 + | putative inner membrane protein TERM 5696 4377666 - 4377705 + T 76 -7.8 -4.2803 | gap 1, opp_overlap 4377688, overlap 4377667 4377670 CCGCGGAATAGTGTG CGAATGCCGGATGG-CGGT ATA ACCGGCCATCCGACGTACA TTTTACCTTGCGGTG TERM 5697 4377667 - 4377704 + T 77 -11.3 -3.16336 | gap 1, opp_overlap 4377688, overlap 4377666 4377670 CGCGGAATAGTGTGC GAATGCCGGATGG-CGGT ATA ACCGGCCATCCGACGTAC ATTTTACCTTGCGGT TERM 5698 4377670 - 4377701 + T 77 -11.6 -2.77861 | gap 1, opp_overlap 4377688, overlap 4377667 4377666 GGAATAGTGTGCGAA TGCCGGATGG-CGGT ATA ACCGGCCATCCGACG TACATTTTACCTTGC trmA 4378808 - 4377708 - | tRNA (uracil-5-)-methyltransferase TERM 5699 4377872 - 4377925 + g 74 -10.3 -3.58343 | GTGGATAAGCCTGCA CCATTTTTTCCGTTTCGCTGTCCAG ACCG CTGCGCGGCGGATCGACAAAAATGG TTTCGCACTGATAGC TERM 5700 4378155 - 4378141 - G 85 -4.2 -5.27938 | AGCGCTAAAGAAAAA TTGCCG TTG CCGCAA TACAACTCAAGCAGA TERM 5701 4379293 - 4379305 + G 71 -10.5 -3.29461 | AACCGTTTTCAGCAG CCGCG CAG CGCGG TTCTGGCGCCCGTTA btuB 4379182 - 4381026 + | TonB-dependent vitamin B12 receptor TERM 5702 4381035 - 4381068 + F 71 -10.3 -2.64354 | gap 1, overlap 4381034 CTTCTGAACCACGTC CCACCG-TGCTGGTAT TTG ATTCCGGCGTCGGTGG ATTGTCGGTCTATGA murI 4381040 - 4381822 + | glutamate racemase TERM 5703 4382006 - 4381990 - f 76 -5.1 -4.75954 | AAAAGCGAAAATAAA CGCTTGA CTC TGAAGCG GGAAAGCGTAATATG TERM 5704 4384135 - 4384098 - g 79 -3.4 -5.14563 | opp_overlap 4384100 4384128, overlap 4384100 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 5705 4384198 - 4384174 - g 74 -8 -3.93061 | gap 1, opp_overlap 4384174 4384181, overlap 4384178 4384184 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT SeD_A4541 4384083 - 4384199 + | hypothetical protein TERM 5706 4384752 - 4384740 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5707 4387421 - 4387380 - f 95 -13.1 -3.76224 | opp_overlap 4387385 4387390, overlap 4387385 4387390 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTT GTCTGTTTCTGCCGG TERM 5708 4387385 - 4387416 + F 100 -17.4 -5.1634 | opp_overlap 4387385 4387380 4387390, overlap 4387390 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTTGTCTGTTTCT TERM 5709 4387416 - 4387385 - f 100 -13 -4.9448 | opp_overlap 4387385 4387390, overlap 4387380 4387390 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTTGTCTGTTTCT TERM 5710 4387411 - 4387390 - f 93 -15.9 -2.91914 | opp_overlap 4387385 4387390, overlap 4387385 4387380 TCAAATAAAACGAAG GGCCCTGTC GGAA GACAGGGCC TTTTGTTTTTGTCTG TERM 5711 4387390 - 4387411 + F 100 -15.9 -5.38839 | opp_overlap 4387390 4387385 4387380, overlap 4387385 TCAAATAAAACGAAG GGCCCTGTC GGAA GACAGGGCC TTTTGTTTTTGTCTG murB 4387555 - 4388583 + | UDP-N-acetylenolpyruvoylglucosamine reductase SeD_A4546 4388580 - 4389542 + | biotin-[acetyl-CoA-carboxylase] ligase TERM 5712 4389540 - 4389576 + T 84 -10.4 -3.91984 | gap 1, opp_overlap 4389542 4389550, overlap 4389550 CTGCGAAGCGCCGAA TAGTAAAAAAGGGGAGT CGGT GCTCCCCTTTTTT-CTG TTATTTCCGCAATCT TERM 5713 4389574 - 4389542 - T 70 -10.1 -3.04322 | gap 1, opp_overlap 4389540 4389550, overlap 4389550 GCGAAGCGCCGAATA GTAAAAAAGGGGAG TCGGTG CTCCCCTTTTTT-C TGTTATTTCCGCAAT TERM 5714 4389567 - 4389550 - T 100 -8.4 -5.27779 | opp_overlap 4389540 4389550, overlap 4389542 CCGAATAGTAAAAAA GGGGAG TCGGTG CTCCCC TTTTTTCTGTTATTT TERM 5715 4389550 - 4389567 + T 100 -9.1 -5.57729 | opp_overlap 4389550 4389542, overlap 4389540 CCGAATAGTAAAAAA GGGGAGT CGGT GCTCCCC TTTTTTCTGTTATTT coaA 4390527 - 4389577 - | pantothenate kinase TERM 5716 4389707 - 4389720 + g 70 -6.7 -4.10744 | opp_overlap 4389704 4389700, overlap 4389697 TTCCAAAGCGAAGTC GCTGT ATTA ACAGC TTCTTCTTTAGATAA TERM 5717 4390083 - 4390093 + g 78 -2.4 -5.1963 | GCATATCATACGATT CGGG GAA CCCC TTTTTCTTCATTAAC TERM 5718 4391169 - 4391157 - H 73 -7.7 -4.15222 | opp_overlap 4391153 ACCGGCTCGAATAAA GAGAG TTT CTCTC GATATTCAGTGCAGA tuf1 4391486 - 4392670 + | translation elongation factor Tu TERM 5719 4392722 - 4392705 - f 95 -11.3 -4.65747 | opp_overlap 4392705 CAATGCGCAATAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5720 4392705 - 4392722 + F 95 -11.3 -4.60924 | opp_overlap 4392705 CAATGCGCAATAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5721 4393192 - 4393206 + G 77 -11.4 -3.52896 | CCACGCTGATCGTCG CTGCGG TTA CCGCAG TTATGTCACTGATCC secE 4392900 - 4393283 + | preprotein translocase subunit secE nusG 4393285 - 4393830 + | transcription termination/antitermination factor NusG TERM 5722 4393865 - 4393847 - f 91 -7.4 -5.14563 | opp_overlap 4393851 GCTGCGATCAAAAAA GCAGCGAT CTA ATCGTTGC ATAGGGCGCGAAATT TERM 5723 4393870 - 4393898 + F 100 -17.6 -5.35224 | CTAATCGTTGCATAG GGCGCGAAATTG ACATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 5724 4394312 - 4394289 - g 81 -8.2 -4.26681 | gap 1 ACAAAGTAGGTAAAA TTTCCCGC-GC TCA GCTGCAGGAAA TCGCGCAGACCAAAG rplK 4393988 - 4394416 + | ribosomal protein L11 TERM 5725 4394963 - 4394923 - g 74 -3.1 -4.98255 | opp_overlap 4394931 CCGTAACGACAAAAA CGGCATCATCCACACCACC ATC GGTAAAGTGGACTTTGACG CTGACAAACTGAAAG rplA 4394420 - 4395124 + | ribosomal protein L1 rplJ 4395544 - 4396041 + | ribosomal protein L10 TERM 5726 4396034 - 4396047 + F 74 -8.1 -3.89695 | opp_overlap 4396034 4396033 GCGATGCAAAAGAAG CTGCG TAAT CGCAG TTGTCTTTATCAAGC rplL 4396108 - 4396473 + | ribosomal protein L7/L12 TERM 5727 4396513 - 4396538 + F 100 -17.7 -4.64766 | opp_overlap 4396506 4396504 4396503, overlap 4396484 AGAAATCAGGCTGAT GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGCTGTAAG TERM 5728 4396757 - 4396740 - f 71 -7.7 -3.86524 | ATAGTGTTGCACAAA CTGTCCC CCGC AGGACAG ATGGGTCGACTTGTC TERM 5729 4399833 - 4399817 - g 76 -2.9 -5.10033 | overlap 4399818 CGAAGAGAAACAAAA TCAGCTG GAA CAACTGG CTGAGCAGTATGACG TERM 5730 4400426 - 4400391 - g 74 -10.4 -3.55815 | gap 1, opp_overlap 4400393, overlap 4400422 AAAGAGCTGCTGAAA CTGGGCGACCTG-CCGA CCT CCGGTCAGATCACCCTG TTCGATGGCCGTACG rpoB 4396791 - 4400819 + | DNA-directed RNA polymerase, beta subunit TERM 5731 4400838 - 4400867 + F 90 -13.6 -3.4252 | opp_overlap 4400834 4400832, overlap 4400839 TCGCTCAAACAGGTC ACTGGTGTCGGG GTAAAA CCCGACACCAGA TTGTGCTAACTCCGA TERM 5732 4400839 - 4400866 + F 100 -17.1 -2.65298 | opp_overlap 4400834 4400832, overlap 4400838 CGCTCAAACAGGTCA CTGGTGTCGGG GTAAAA CCCGACACCAG ATTGTGCTAACTCCG TERM 5733 4402626 - 4402606 - g 77 -11.1 -3.5882 | opp_overlap 4402606 4402605 CACACCAGCCTGAAA GACACGACC GTT GGTCGCGCC ATTCTGTGGATGATC TERM 5734 4402861 - 4402846 - g 78 -2.6 -5.24531 | gap 1, overlap 4402849 ATCCCGGAGAAAAAA CACGAGA TCA TCTC-TG AGGCGGAAGCTGAAG rpoC 4400896 - 4405119 + | DNA-directed RNA polymerase, beta' subunit TERM 5735 4405155 - 4405128 - f 93 -14.2 -3.61764 | opp_overlap 4405126 4405125 4405150 4405151 CGAGTAATCGTTAAA TGGTGGAGGGGT GTTT ATCCCTCCACCA GCATTGTGCTGGAGC TERM 5736 4405432 - 4405442 + G 81 -6.8 -4.75518 | TTTTTATTTTTCAAT GCCA TGC TGGC TTTTGATTTTATCTG SeD_A4562 4405202 - 4405483 + | putative inner membrane protein SeD_A4563 4405919 - 4405485 - | hypothetical protein SeD_A4564 4406209 - 4407237 + | NleB TERM 5737 4407382 - 4407405 + T 89 -8.8 -4.67234 | opp_overlap 4407382 ACGGACATAAAAAAA CGGGAGGTCG ATAA CAATCTCCCG TTTTTCGCATTACGT TERM 5738 4407405 - 4407382 - T 100 -8.8 -5.72616 | opp_overlap 4407382 ACGGACATAAAAAAA CGGGAGGTCG ATAA CAATCTCCCG TTTTTCGCATTACGT thiH 4408591 - 4407458 - | thiazole biosynthesis protein ThiH TERM 5739 4407604 - 4407621 + g 89 -9.1 -4.56597 | CCGGATGATCGTCAG CGTAGCC GCCG GGCTGCG TTTTTGAGAAGGCGC TERM 5740 4408270 - 4408298 + g 78 -11.7 -3.21099 | opp_overlap 4408266 CCCTTTGAATATCCA CCTCATCCAGCGT CTT ACGCTTGATGCGG TTGCTCATCGAAAAA thiG 4409373 - 4408588 - | thiazole biosynthesis protein ThiG TERM 5741 4409107 - 4409138 + g 74 -7.2 -4.07568 | gap 1, overlap 4409116 CAGCGCTTCACGCGC CAGCTGG-GCGGCGA AGA TCGCCTCTTCAGCGG TTTTCGCCCCGGAGG thiS 4409560 - 4409360 - | thiamine biosynthesis protein ThiS thiF 4410299 - 4409541 - | thiazole biosynthesis adenylyltransferase ThiF thiE 4410927 - 4410292 - | thiamine-phosphate pyrophosphorylase TERM 5742 4410624 - 4410653 + g 74 -10.8 -3.61328 | gap 1, overlap 4410637 CGCCCAGGCGTAACC CCGCCG-CCTGAA TGGCC TTCAGGTCGGTGG TTTCAAGGTCTTCCT thiC 4412822 - 4410927 - | thiamine biosynthesis protein ThiC TERM 5743 4412120 - 4412166 + g 70 -9.5 -3.36273 | gap 1, overlap 4412121 TATTAGCGTTGACCT TCACCAGGAAGTTGCGGCCGAT AATC ATCGGCTCCGA-TTCCGGGTGG TTGATGTTGGCGGGA SeD_A4572 4413674 - 4413186 - | regulator of sigma D nudC 4413767 - 4414540 + | NADH pyrophosphatase hemE 4414581 - 4415645 + | uroporphyrinogen decarboxylase TERM 5744 4416064 - 4416054 - g 74 -2.4 -5.08824 | opp_overlap 4416054 GGCGTAGCGAAAAAA CGGC TAT GCGG TAAATTTGAGCCACT nfi 4415655 - 4416326 + | endonuclease V SeD_A4576 4416368 - 4416958 + | hypothetical protein TERM 5745 4417360 - 4417378 + G 89 -8.8 -4.59342 | opp_overlap 4417357 AGAAATCAAAATCGC CGCCGCTA ACG TACCGGCG TTTGTTTCTGGTAAA hupA 4417145 - 4417417 + | DNA-binding protein HU-alpha TERM 5746 4417447 - 4417462 + G 93 -10.4 -4.45083 | opp_overlap 4417447 AACAGTTTTATCGAA GGGGCT CGTC AGCCCC TTTTGTCCGTCTGGC SeD_A4578 4417429 - 4418121 + | hypothetical protein TERM 5747 4418152 - 4418129 - T 100 -16.8 -3.08679 | opp_overlap 4418123, overlap 4418134 CCTTTTGATGGAATA CCGAATGGCG AAGC CGCCATTCGG CAAACATGCTTTACC SeD_A4579 4418618 - 4418163 - | zinc resistance-associated protein TERM 5748 4418760 - 4418733 - H 80 -6.2 -4.79667 | opp_overlap 4418742 AAAAGCGAGTAAAAA TGACTCGCATGA CCCG CCTGGCGAGTCA TTTTTACCCATCCGT TERM 5749 4418742 - 4418760 + H 89 -8.8 -4.60041 | opp_overlap 4418733 TAAAAATGACTCGCA TGACCCGC CTG GCGAGTCA TTTTTACCCATCCGT TERM 5750 4420079 - 4420102 + G 78 -6.7 -4.64144 | gap 1, opp_overlap 4420075 4420079, overlap 4420098 ATAACGGGAAAGGGA TCGCC-CCGG ATCAG CTGGAGGCGA TTTTTACGCCTTATT SeD_A4580 4418872 - 4420269 + | sensor protein ZraS TERM 5751 4421551 - 4421524 - g 100 -9.7 -5.00616 | CTGCGCTGGAAAAAA CGGGCGGCAAC AAAACG GAAGCCGCCCG CCAATTGGGCATTAC SeD_A4581 4420275 - 4421600 + | transcriptional regulatory protein ZraR purD 4422886 - 4421597 - | phosphoribosylamine--glycine ligase purH 4424491 - 4422902 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 5752 4424521 - 4424564 + r 85 -12.6 -3.37474 | opp_overlap 4424522 4424524 4424559, overlap 4424522 4424559 4424561 ATTTGACGATTACAG AGAGCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGCCCC TTATGGGGTATTCTC TERM 5753 4424563 - 4424522 - R 100 -20.5 -2.96216 | opp_overlap 4424521 4424522 4424559 4424561, overlap 4424524 4424559 TTTGACGATTACAGA GAGCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGCCC CTTATGGGGTATTCT TERM 5754 4424522 - 4424563 + r 90 -16.1 -2.62003 | opp_overlap 4424522 4424524 4424559, overlap 4424521 4424559 4424561 TTTGACGATTACAGA GAGCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGCCC CTTATGGGGTATTCT TERM 5755 4424561 - 4424524 - R 100 -19.5 -3.03443 | opp_overlap 4424522 4424521 4424559, overlap 4424522 4424559 TGACGATTACAGAGA GCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGC CCCTTATGGGGTATT TERM 5756 4424608 - 4424626 + r 83 -2.4 -5.63236 | opp_overlap 4424606, overlap 4424612 ATTGTAACGAAAACG TTTGCG CAACGCT CGCGAA TTTTTCTTTTTAAAT TERM 5757 4424904 - 4424890 - R 76 -4.2 -5.0916 | opp_overlap 4424890, overlap 4424891 4424898 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 5758 4424936 - 4424924 - R 71 -7.7 -4.00532 | overlap 4424934 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACGGTG TERM 5759 4426855 - 4426890 + r 77 -9.2 -4.00532 | opp_overlap 4426866 AGGCGTTGCCATCAG TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA TTTGCTCTTTAAAAA TERM 5760 4426954 - 4426930 - R 71 -8 -3.93061 | gap 1, opp_overlap 4426930 4426937, overlap 4426934 4426940 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5761 4427508 - 4427496 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5762 4430136 - 4430177 + r 100 -20.3 -2.81966 | opp_overlap 4430139 4430144, overlap 4430144 4430147 CTGCCAGGCATCAAA CAAGTGAAGAAGCCCGTCC GTCA GGACGGGCTTCTTTGCGTG TGTGGTAACATTTAA TERM 5763 4430174 - 4430139 - R 100 -16.2 -4.015 | opp_overlap 4430136 4430144 4430147, overlap 4430144 CCAGGCATCAAACAA GTGAAGAAGCCCGTCC GTCA GGACGGGCTTCTTTGC GTGTGTGGTAACATT TERM 5764 4430144 - 4430169 + r 100 -19.1 -3.74792 | opp_overlap 4430139 4430144, overlap 4430136 4430147 CATCAAACAAGTGAA GAAGCCCGTCC GTCA GGACGGGCTTC TTTGCGTGTGTGGTA TERM 5765 4430169 - 4430144 - R 100 -19.1 -3.3458 | opp_overlap 4430144 4430136 4430147, overlap 4430139 CATCAAACAAGTGAA GAAGCCCGTCC GTCA GGACGGGCTTC TTTGCGTGTGTGGTA TERM 5766 4430147 - 4430166 + r 100 -15 -3.99985 | opp_overlap 4430144 4430139, overlap 4430144 4430136 CAAACAAGTGAAGAA GCCCGTCC GTCA GGACGGGC TTCTTTGCGTGTGTG TERM 5767 4430254 - 4430210 - R 79 -11.4 -3.30243 | gap 1, opp_overlap 4430210 4430209, overlap 4430200 4430197 ATGTAGGCCTGATAA GCGCAGC-GCCATCAGGCAAC CTGC ACCGCCGGATGGCCGCTTCGC CTTATCCGGCCTACA SeD_A4590 4430732 - 4430295 - | acetyltransferase, gnat family metA 4430889 - 4431818 + | homoserine O-succinyltransferase TERM 5768 4431879 - 4431864 - f 71 -10.4 -2.72661 | opp_overlap 4431864 CAGCATGTTGAATCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA TERM 5769 4431864 - 4431879 + F 100 -10.4 -5.63517 | opp_overlap 4431864 CAGCATGTTGAATCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA TERM 5770 4432788 - 4432768 - g 76 -11.9 -3.05384 | opp_overlap 4432765 GCCTGGTGGAGCGAA GTCTTCAGC TAC GCCGAAGAC CGCTTTAACCTGCCG aceB 4432084 - 4433688 + | malate synthase A TERM 5771 4433924 - 4433909 - g 90 -5.4 -5.15969 | GGTGAAGCGAAAAAA GGCTAT ATCA ACAGCC TTGGCGCGCTGACTG aceA 4433720 - 4435024 + | isocitrate lyase TERM 5772 4435461 - 4435488 + G 90 -8.4 -4.72188 | overlap 4435464 TTGCCGGTTATTTGA CCACCGCTCG TTAACACC CGAGCGGTTG TTTATTTTCAGTTCG TERM 5773 4435464 - 4435485 + G 85 -8.7 -4.44301 | overlap 4435461 CCGGTTATTTGACCA CCGCTCG TTAACACC CGAGCGG TTGTTTATTTTCAGT TERM 5774 4435776 - 4435788 + G 82 -5.5 -5.08088 | opp_overlap 4435769 4435767 ATTAACCACACCTGA CGGTA CGC TGCCG TTTTTATTGCCGATT aceK 4435126 - 4436877 + | isocitrate dehydrogenase kinase/phosphatase SeD_A4596 4437275 - 4436841 - | putative cytoplasmic protein TERM 5775 4436934 - 4436922 - G 80 -4.7 -5.00616 | overlap 4436923 CTCGCGCTCAAAAAA GGCCC GGT GTGCC GCTTGCCAGTACGCC TERM 5776 4437060 - 4437007 - G 83 -9.6 -4.08767 | gap 3, opp_overlap 4437059 CTCATCTCGTTAAAA CGGATCAGCCTGAGCGCCAGCGTGCGT ATG ACGCACAC-GGCG-TC-GCCTGTGCCG TTGAGCACAATGTGA SeD_A4597 4438083 - 4437259 - | acetate operon repressor TERM 5777 4437613 - 4437592 - G 80 -5.1 -4.83615 | gap 1, overlap 4437594 GAGCTGTGATAAAAA CGCCT-TGCC CGC GCCAGAGGCG TGCATGGGCAGCTTG SeD_A4598 4438338 - 4438207 - | hypothetical protein TERM 5778 4439540 - 4439524 - g 75 -6.5 -4.41237 | overlap 4439526 ATCAAAGAAGAGAAA TACAGCG AAG CGCTGGA TGTCGCCCGTCAGCA TERM 5779 4439538 - 4439526 - g 73 -9.1 -3.79177 | overlap 4439524 CAAAGAAGAGAAATA CAGCG AAG CGCTG GATGTCGCCCGTCAG TERM 5780 4439592 - 4439641 + G 72 -12.1 -2.72344 | gap 1, opp_overlap 4439592, overlap 4439603 4439604 TATTGATATCAATAT GGATGAGGGGATGCTCGA-CGCCG AAG CGGCGATGGTGCGTTTCCTCAGCC TGATTGCCGGTGAGC TERM 5781 4440054 - 4440037 - g 74 -8.3 -3.93262 | opp_overlap 4440036 4440051 TGCGAAGACATCAAA CGCGAGC TGCC GCACGCG CTGATCTCCGGCGGC TERM 5782 4441095 - 4441081 - g 76 -2.7 -5.0133 | overlap 4441082 CACGCCCGCAAAAAA CCGCG TACGC CGCCG GTCACGCTGGAAGCG metH 4438387 - 4442070 + | methionine synthase TERM 5783 4442099 - 4442129 + F 83 -9 -4.20918 | opp_overlap 4442101 4442103 4442106, overlap 4442101 4442103 4442106 CACTTTTCCTTACAA CATACAAGGCACTC ATT GGGTGCCTTGTCTC TTTCTTACAATTAAA TERM 5784 4442101 - 4442127 + F 93 -11.6 -3.70139 | opp_overlap 4442101 4442103 4442106, overlap 4442099 4442103 4442106 CTTTTCCTTACAACA TACAAGGCACTC ATT GGGTGCCTTGTC TCTTTCTTACAATTA TERM 5785 4442103 - 4442125 + F 90 -14.2 -3.4214 | opp_overlap 4442101 4442103 4442106, overlap 4442101 4442099 4442106 TTTCCTTACAACATA CAAGGCACTC ATT GGGTGCCTTG TCTCTTTCTTACAAT TERM 5786 4442125 - 4442103 - f 79 -12 -3.17146 | opp_overlap 4442103 4442101 4442099 4442106, overlap 4442101 4442106 TTTCCTTACAACATA CAAGGCACTC ATT GGGTGCCTTG TCTCTTTCTTACAAT TERM 5787 4442106 - 4442122 + F 79 -10.1 -3.83559 | opp_overlap 4442106 4442103 4442101, overlap 4442103 4442101 4442099 CCTTACAACATACAA GGCACTC ATT GGGTGCC TTGTCTCTTTCTTAC SeD_A4600 4442196 - 4442315 + | hypothetical protein TERM 5788 4443033 - 4443062 + G 75 -12.8 -2.64759 | opp_overlap 4443022 4443023 4443020, overlap 4443032 4443030 AACAGCGCCGCCAAT GCTGCCGCGCGT CGCGTA GCGCTCGGCAGC CTATTGTTCAAATTG TERM 5789 4443206 - 4443232 + G 76 -5 -4.83169 | overlap 4443199 4443207 GCGCTGCCTGGCGAT GGTGCCATTTGC CGA GCTGATGGCGCG TTTTTGTAAACGAAT SeD_A4601 4442337 - 4443968 + | sodium-dependent inorganic phosphate TERM 5790 4443975 - 4444026 + F 83 -13.2 -3.12351 | gap 1, opp_overlap 4443975 GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTACG GAGAACATGCG TGTAGGC-CCGTCATTCGGCA TTCAATGTGGCCAGG TERM 5791 4444026 - 4443975 - f 72 -8.1 -3.79043 | gap 1, opp_overlap 4443975 GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTAC GGAGAACATGCGT GTAGG-CCCGTCATTCGGCA TTCAATGTGGCCAGG TERM 5792 4444094 - 4444133 + F 74 -10.6 -3.16881 | opp_overlap 4444094 4444097 TTCGCCCGCTTTAAA CACCCAGGTGGTATTCGG GCCG CCGAGAACCGCCTGGCCG TTGCTCACCTGAATC TERM 5793 4444130 - 4444097 - f 73 -10.9 -2.60496 | opp_overlap 4444094, overlap 4444094 GCCCGCTTTAAACAC CCAGGTGGTATTCGG GCCG CCGAGAACCGCCTGG CCGTTGCTCACCTGA TERM 5794 4445013 - 4445001 - g 89 -3.3 -5.55664 | TGACCAGCAAAAAAA TGGCC AAA GTCCA GCGCACGGCTAAAAA TERM 5795 4445049 - 4445030 - g 77 -3.5 -5.03314 | CGCACGGCTAAAAAA TCACGCG TTCAGG CTCGTGA GGCCAGAGAGGCGGT SeD_A4603 4444940 - 4445479 + | nucleoprotein/polynucleotide-associated enzyme SeD_A4604 4445526 - 4446395 + | ribosomal large subunit pseudouridine synthase F SeD_A4605 4446664 - 4446392 - | hypothetical protein SeD_A4606 4447485 - 4446727 - | DeoR family regulatory protein TERM 5796 4446866 - 4446882 + g 79 -2.9 -5.1861 | opp_overlap 4446842 4446840 CCAAATTTGGTATGG TCGGCGA GAA TCACTGA TTTTTTGCTCATCGC SeD_A4607 4448335 - 4447472 - | putative conserved hypothetical protein SeD_A4608 4449191 - 4448352 - | hypothetical protein TERM 5797 4448878 - 4448860 - G 70 -6.6 -4.08064 | AAGGTTTCGGTAAAA CCGCCGGC GAT ACCAACGG TGATAAAAATATCGT SeD_A4609 4450804 - 4449215 - | hypothetical protein TERM 5798 4449443 - 4449433 - G 86 -6.8 -5.00616 | TTCCGGCCCAAAAAA TGGC GGA GCCA AAAACAATTTTGTTG TERM 5799 4449523 - 4449543 + g 77 -3.9 -5.00616 | opp_overlap 4449514 TAATGAGCAGGCCCG GCGTAGC AACGGCA GCTTCGC TTTTTTCACGCGGGG SeD_A4610 4451054 - 4451173 + | hypothetical protein SeD_A4611 4451961 - 4451233 - | putative cytoplasmic protein TERM 5800 4451555 - 4451566 + g 74 -4.4 -4.77157 | CTTATGGCATTGATT TCCT TTTC AGGA TTTTTCATAAATTCA TERM 5801 4451664 - 4451675 + g 74 -3 -4.8487 | opp_overlap 4451664 CATGCTGAGAAAAGT CATT AAGT AATG TTATTTTTTTCATAG TERM 5802 4452061 - 4452091 + H 95 -11.5 -4.61852 | opp_overlap 4452059 4452068 TATGGTTATTGAAGT TTAATTACATTCA AGATG TGAATGTAATTAA TTTGTTTATAATGTT TERM 5803 4452399 - 4452366 - H 73 -9.5 -3.41602 | opp_overlap 4452369, overlap 4452369 GTGATGTTACGAGAA CGATGCCCGATAGCG TTTA CGCTACCGGGCCTTA CTAAACGCTCTATCA TERM 5804 4452396 - 4452369 - H 82 -13.4 -2.86449 | opp_overlap 4452369, overlap 4452366 ATGTTACGAGAACGA TGCCCGATAGCG TTTA CGCTACCGGGCC TTACTAAACGCTCTA TERM 5805 4452369 - 4452396 + H 77 -11.2 -3.15249 | opp_overlap 4452369 4452366 ATGTTACGAGAACGA TGCCCGATAGCG TTTA CGCTACCGGGCC TTACTAAACGCTCTA SeD_A4612 4453323 - 4453451 + | hypothetical protein SeD_A4613 4453405 - 4453752 + | DNA-binding protein RdgB lysC 4455232 - 4453883 - | aspartokinase III, lysine-sensitive pgi 4455620 - 4457269 + | glucose-6-phosphate isomerase TERM 5806 4457277 - 4457325 + F 73 -11.2 -2.72144 | gap 2, opp_overlap 4457323 4457324, overlap 4457278 GAGCCTGATGGCACT GCGCTTATCCGGTCTACGTAATGC ATA GCGTC-TGTAGGCCGGATAAG-GC GTTTCGCCGCCATCC TERM 5807 4457278 - 4457326 + F 82 -11.2 -3.53811 | opp_overlap 4457323 4457324, overlap 4457277 AGCCTGATGGCACTG CG-CTTATCCGGTCTACGTAATGC ATA GCGTC-TGTAGGCCGGATAAGGCG TTTCGCCGCCATCCG TERM 5808 4457387 - 4457368 - f 83 -4.2 -5.31072 | opp_overlap 4457369, overlap 4457369 ATAAGATAATAAAAA GGCCGATA TTCA CATCGGCT TTTTTTATAAGATAA TERM 5809 4457369 - 4457386 + F 91 -7 -5.626 | opp_overlap 4457368 4457369 TAAGATAATAAAAAG GCCGAT ATTCAC ATCGGC TTTTTTTATAAGATA SeD_A4616 4457710 - 4457955 + | hypothetical protein TERM 5810 4457974 - 4457995 + F 95 -11.7 -4.13014 | opp_overlap 4457974 4457977, overlap 4457977 CGGTACGTTTAACCA TAACCACAC TCCG GTGTGGTTA TTTTGCCCCTCTGGA TERM 5811 4457995 - 4457974 - f 76 -11.7 -2.72344 | opp_overlap 4457974 4457977, overlap 4457977 CGGTACGTTTAACCA TAACCACAC TCCG GTGTGGTTA TTTTGCCCCTCTGGA TERM 5812 4457977 - 4457992 + F 79 -9 -4.18908 | opp_overlap 4457977 4457974, overlap 4457974 TACGTTTAACCATAA CCACAC TCCG GTGTGG TTATTTTGCCCCTCT TERM 5813 4457992 - 4457977 - f 72 -9 -3.51329 | opp_overlap 4457974 4457977, overlap 4457974 TACGTTTAACCATAA CCACAC TCCG GTGTGG TTATTTTGCCCCTCT TERM 5814 4458313 - 4458299 - g 70 -7 -4.07568 | GCCGTCTGGTCAAAA CGCTGC TCA GCGGCG ACAACCTGATCGATG SeD_A4617 4458019 - 4458657 + | hypothetical protein SeD_A4618 4458654 - 4459391 + | hypothetical protein SeD_A4619 4459391 - 4461487 + | putative lipoprotein TERM 5815 4461710 - 4461726 + G 72 -2.1 -4.87665 | GGGGCTGCTTACCCT CGGTCTG ATC CTGGTCG TTTTTCTCGGTAAAG SeD_A4620 4461630 - 4462040 + | protein PsiE TERM 5816 4462125 - 4462110 - T 100 -10.4 -5.66684 | TAACGCATAAAAAAA GCGCTC CGAA GAGCGC CAAAATACGACCATA malG 4463096 - 4462206 - | maltose/maltodextrin ABC transporter, permease protein MalG malF 4464655 - 4463111 - | maltose/maltodextrin ABC transporter, permease protein MalF TERM 5817 4463681 - 4463669 - G 71 -4.7 -4.55849 | CAAAATTGAAATAAA CGACG GTA CGGCG TAGGGCAGAATCAGC TERM 5818 4464612 - 4464634 + g 75 -4 -4.91852 | opp_overlap 4464613, overlap 4464602 4464614 ATTACTGACCATTTA AGCTGGTCGC TTT GCCACCAGTG TTTCTTTTTAATGAC TERM 5819 4464614 - 4464632 + g 76 -8.8 -4.06997 | opp_overlap 4464613, overlap 4464602 4464612 TACTGACCATTTAAG CTGGTCGC TTT GCCACCAG TGTTTCTTTTTAATG TERM 5820 4464712 - 4464754 + r 95 -12.9 -3.86346 | gap 1, opp_overlap 4464751 TGTGCCTGATGGCGC TGCGCTTATCAGGCCTACGG TGTG TTGTAGGCCGGATAAG-GCA TTTATGCCGCCATCC SeD_A4623 4465977 - 4464787 - | periplasmic maltose-binding protein TERM 5821 4466774 - 4466800 + G 74 -4.4 -4.7497 | gap 1, overlap 4466783 CGCGTAGCGATTGGC CGCACGCTGGT GGCGGA GCC-GCGTGTG TTTTTGCTGGATGAA malK 4466339 - 4467448 + | maltose/maltodextrin ABC transporter, ATP-binding protein MalK SeD_A4625 4467537 - 4468895 + | maltoporin TERM 5822 4469253 - 4469234 - g 70 -2.9 -4.69664 | gap 1, overlap 4469236 4469248 TAGATCAGTCAAAAA CG-CAGTT TACCC AACTGGCG ACGGGTGGCCAGCGC TERM 5823 4469803 - 4469765 - g 76 -12.2 -3.09803 | TAACGGTAGGCAATA CCGCCGCGCCGGTCGCTG CGC CAGCGCCAGTCGCGCCGA AGAAAAGCGAACCGA malM 4469059 - 4469976 + | maltose operon protein MalM TERM 5824 4470010 - 4470029 + F 100 -11.4 -5.75599 | opp_overlap 4470008 GATTTTGCAGCAACT GGTGCGTC TCCT GGCGCACC TTTTTTTGTCATTTC TERM 5825 4470615 - 4470625 + G 89 -3.2 -5.47821 | CGGAAAACCGCTGTT GCTT ACC GAGC TTTTTTTACCTGCAT SeD_A4627 4470157 - 4470654 + | chorismate--pyruvate lyase ubiA 4470668 - 4471540 + | 4-hydroxybenzoate polyprenyl transferase SeD_A4629 4474059 - 4471639 - | glycerol-3-phosphate acyltransferase TERM 5826 4473050 - 4473033 - G 74 -6.9 -4.22652 | CCAGACGACGGAAAA TCGGGCC AGCG GGCCAGA AATTAAGGTTAATAC TERM 5827 4474475 - 4474461 - g 72 -11.4 -3.06679 | opp_overlap 4474457 4474456 AACAGCGCTATTGAA GCGGTC GTT GACCGC ATCGGTTCTGAATAC dgkA 4474230 - 4474598 + | diacylglycerol kinase TERM 5828 4474837 - 4474798 - g 100 -18.8 -3.53444 | gap 1, opp_overlap 4474786 CGACGCGTGCGGAAA TCGCGCAGCGTTTGGGG TTCCGTT CCCCAAACGCTGCG-GA AGAACACCTTAAAGC lexA 4474707 - 4475315 + | LexA repressor TERM 5829 4475630 - 4475661 + G 86 -7.2 -4.73614 | gap 1 GCCCGGTTTTCCTGG GCGGCGTGGCGGTGG GCG CGACTGCCAC-CAGC TTTCTTTTCATGCTG TERM 5830 4476173 - 4476193 + G 70 -6.7 -4.11692 | TGCTAAAACAGGCCT GGCGCGGCA ACG TGCGCCGCC TTTTGGCGCTCAATC SeD_A4632 4475494 - 4476819 + | DNA-damage-inducible protein F SeD_A4633 4476801 - 4476929 + | putative cytoplasmic protein SeD_A4634 4476948 - 4477160 + | hypothetical protein SeD_A4635 4477774 - 4477259 - | zinc uptake regulation protein TERM 5831 4477711 - 4477729 + g 78 -6.6 -4.66833 | overlap 4477713 GAGGCGTCAGGCGCA CGTTGCGC TGC GCGCAGAG TTTTTCAGCTTGCGC TERM 5832 4478461 - 4478433 - g 74 -4.4 -4.74504 | gap 1, overlap 4478434 4478435 ATCTCAACGGAAAAA CCGCCCG-CGCCA ATGC CGGCGCCGGGTTG GCGGTAAGTATTCCA SeD_A4636 4478021 - 4479331 + | conjugative transfer protein TERM 5833 4479342 - 4479362 + F 100 -18.3 -3.70068 | TCTGAGGTGCTTTCA CCGGAGGCG CTA CGCCTCCGG TTTAGCGTTATGCTA SeD_A4637 4479419 - 4480417 + | tRNA-dihydrouridine synthase A TERM 5834 4480448 - 4480471 + T 76 -4.5 -5.07523 | TAGTCAATCTCACCA CGCTCTGTG CAGTCT TGCAGGGCG TTTTCTTTATATATC TERM 5835 4480989 - 4480959 - T 89 -5.6 -5.80364 | gap 2, opp_overlap 4480959 4480961 4480962 4480963, overlap 4480963 AGCCGAACAAAAAAA GAAA--GGGCTTCC CGGGT GGAAGCCCAATTTC TTTGCAGAGCTATTA TERM 5836 4480961 - 4480985 + T 72 -5.6 -4.41616 | opp_overlap 4480959 4480963, overlap 4480959 4480962 4480963 CCGAACAAAAAAAGA AAGGGCTTCC CGGGT GGAAGCCCAA TTTCTTTGCAGAGCT TERM 5837 4480963 - 4480983 + T 78 -12.6 -2.54371 | opp_overlap 4480959 4480963, overlap 4480962 4480961 4480959 GAACAAAAAAAGAAA GGGCTTCC CGGGT GGAAGCCC AATTTCTTTGCAGAG TERM 5838 4480983 - 4480963 - T 100 -12.6 -5.33131 | opp_overlap 4480963 4480962 4480961 4480959, overlap 4480959 GAACAAAAAAAGAAA GGGCTTCC CGGGT GGAAGCCC AATTTCTTTGCAGAG SeD_A4639 4481985 - 4481002 - | oxidoreductase, zinc-binding dehydrogenase family TERM 5839 4481073 - 4481089 + g 74 -7.3 -4.08216 | CGCGACGGGCATCTT TTAACGC ATA GCGTTGA TTTTCAGCCACATCA TERM 5840 4481442 - 4481454 + g 75 -6.2 -4.58395 | opp_overlap 4481421, overlap 4481429 AGGCGCCGGCGTCCA GCGC CCGCT GCGC TTTTTGCGCGCTACC TERM 5841 4482136 - 4482125 - g 71 -5.8 -4.36914 | opp_overlap 4482125 GTTGCCGGGATAAAA GTGC CGCC GCAC TCGATTGAAGCGGAA TERM 5842 4482397 - 4482385 - g 78 -6.9 -4.59853 | overlap 4482387 GGAACTGTCTAAAAA CACGC CAA GCGCG GCGAACATCAGTGCT dnaB 4482050 - 4483465 + | replicative DNA helicase alr 4483497 - 4484576 + | alanine racemase SeD_A4642 4484678 - 4484547 - | hypothetical protein tyrB 4484762 - 4485955 + | aromatic-amino-acid transaminase TERM 5843 4485952 - 4486002 + F 71 -9.6 -3.29541 | opp_overlap 4485958 4485978, overlap 4485949 ATTTGCCGCTGTCAT GTAATATTCAGGCCGGACGGCGAT AAC AGTGCCCTCCGGCCTGACAATAGC TGTTGTGATCATCCT TERM 5844 4485996 - 4485958 - f 78 -11.7 -3.08679 | opp_overlap 4485952 4485949, overlap 4485978 CGCTGTCATGTAATA TTCAGGCCGGACGGC GATAACAGT GCCCTCCGGCCTGAC AATAGCTGTTGTGAT TERM 5845 4486051 - 4486083 + F 72 -2.8 -5.00616 | gap 1, overlap 4486053 CGCAGATAATCCTTC CT-TTTGACCGTTAC TGGC GTTATGGTCAGATAG TTTTTTGAGCAAAGA TERM 5846 4486320 - 4486342 + G 83 -10.4 -3.92324 | opp_overlap 4486311 4486309 AAAACAGCCTCACCG GACGCCCGCC GAT GGCGGTCGGC TTTGATATTGACGAC aphA 4486142 - 4486855 + | had superfamily (subfamily iiib) phosphatase TERM 5847 4486883 - 4486859 - f 73 -4.2 -4.77036 | opp_overlap 4486862, overlap 4486860 4486862 TCGGAGTACTAAAAA TCAGGAGAGC GTCAG GCTCTCCTTT TTTGCATGATTTTTG TERM 5848 4486880 - 4486862 - f 74 -10.3 -3.29543 | opp_overlap 4486862, overlap 4486860 4486859 GAGTACTAAAAATCA GGAGAGC GTCAG GCTCTCC TTTTTTGCATGATTT TERM 5849 4486862 - 4486880 + F 100 -10.3 -5.13521 | opp_overlap 4486860 4486859 4486862 GAGTACTAAAAATCA GGAGAGC GTCAG GCTCTCC TTTTTTGCATGATTT TERM 5850 4487029 - 4487050 + G 73 -10.3 -3.38118 | GAGAAGCCGCGCGGG TTTCATCTG ATAA CAGATGAAA TTATCGATAAATTGT SeD_A4645 4486984 - 4487400 + | hypothetical protein SeD_A4646 4487403 - 4487759 + | protein YjbR SeD_A4647 4488098 - 4487760 - | putative inner membrane protein TERM 5851 4488033 - 4488018 - G 80 -10.4 -3.86524 | ATACGTCTGGATAAA CTCGGC AATC GCCGAG GACGCTACAGGGTGT SeD_A4648 4488528 - 4488085 - | hypothetical protein TERM 5852 4488668 - 4488633 - R 100 -9.7 -4.77036 | opp_overlap 4488631, overlap 4488636 4488637 TGGGATGAGGAAAAA TGATGCCGCTTCCCG GCGAAT CGGAAAGCGGCGTGA AGGTTATTTGAGCAT TERM 5853 4488665 - 4488636 - R 77 -11.4 -3.29543 | opp_overlap 4488631, overlap 4488633 4488637 GATGAGGAAAAATGA TGCCGCTTCCCG GCGAAT CGGAAAGCGGCG TGAAGGTTATTTGAG TERM 5854 4488664 - 4488637 - R 86 -14.9 -2.57003 | opp_overlap 4488631, overlap 4488636 4488633 ATGAGGAAAAATGAT GCCGCTTCCCG GCGAAT CGGAAAGCGGC GTGAAGGTTATTTGA uvrA 4491497 - 4488672 - | excinuclease ABC, A subunit TERM 5855 4488729 - 4488697 - G 72 -12 -2.60901 | gap 1, opp_overlap 4488696 4488697, overlap 4488696 ATAGGTTTAAGGAAG CG-GGCGGTATGCGA CGCC TCGCACTCCGCCACG GTTTCCGGCGTACCG TERM 5856 4490571 - 4490557 - G 79 -2.8 -5.24551 | overlap 4490559 TGAAAGTAATAAAAA TTGCGA CGA TCCCAA CCACGAATCGCGCCG TERM 5857 4491327 - 4491309 - G 72 -2.4 -4.88736 | gap 1 CATGAGCGACAAAAA CTGCCGC GCGTAA GCGG-AG AGCGATTCAACGTAA ssb 4491745 - 4492275 + | single-stranded DNA-binding protein TERM 5858 4492336 - 4492355 + F 100 -12.2 -4.69053 | opp_overlap 4492336 4492349, overlap 4492349 TCTCGTCTGCTGAAA TGCCTGGT GTAA ACCAGGCA TTTTCTTACCTGGTA TERM 5859 4492355 - 4492336 - f 88 -12.2 -3.53012 | opp_overlap 4492336 4492349, overlap 4492349 TCTCGTCTGCTGAAA TGCCTGGT GTAA ACCAGGCA TTTTCTTACCTGGTA SeD_A4651 4492666 - 4492806 + | hypothetical protein TERM 5860 4493090 - 4493118 + F 74 -6.8 -4.30719 | opp_overlap 4493093, overlap 4493093 CCTAATTAAAAAAAT GAAGAGTGTTTT TAATT AAAGCACTCATC TTTGTTGTGGGCGCA TERM 5861 4493134 - 4493156 + F 72 -2.8 -4.98255 | TTTGTTGTGGGCGCA TAAAAATGGC GTC GTTGTTTTTA TTTTTCTGATTACGA TERM 5862 4493751 - 4493734 - g 70 -2.8 -4.73682 | GGTTAGAAGACAAAA TCAATA GTAATT TATTGA TAGAAATGGTTATTC SeD_A4652 4493316 - 4493948 + | hypothetical protein SeD_A4653 4493945 - 4495333 + | putative methyl-accepting chemotaxis protein SeD_A4654 4495716 - 4496642 + | putative ABC exporter outer membrane component SeD_A4655 4496666 - 4497916 + | hypothetical protein TERM 5863 4498587 - 4498574 - g 76 -3.1 -5.1356 | GCCTATTAATAAAAA TACCA GTAC TGGCA AAAGTAATAGCAGTA TERM 5864 4499077 - 4499067 - g 75 -6.8 -4.39998 | opp_overlap 4499066 TATGTAGATAATAAA CTGG TTG CCAG CGTTGATGTCGATAA TERM 5865 4499489 - 4499500 + G 73 -5.8 -4.44797 | GCATACCTCAGCGAC GGCA AATC TGCC TTTTACTATTGATAC TERM 5866 4500720 - 4500705 - g 74 -4.7 -4.81851 | ACGCAAACGCAAAAA CCAAC AATAGA GTTGG TCAACGATACGGGGG TERM 5867 4504581 - 4504563 - g 74 -3 -4.8622 | overlap 4504565 4504566 GCGGGGAACGAAAAA CACTCAGC GTC GCTGACGG TCACTGTTGATACCC TERM 5868 4507464 - 4507450 - g 70 -7.1 -4.11394 | ACGGCACGTTTAAAA CGGTG GTACT CACCG AATCAGCCGACGGCT TERM 5869 4509649 - 4509663 + G 71 -7.2 -3.96624 | opp_overlap 4509638 AAGAGGTATCATTCA CAATAG ACA CTATTG TTTCTGATCCCAGTA TERM 5870 4512779 - 4512756 - g 77 -4.4 -4.8622 | opp_overlap 4512770, overlap 4512758 TGGGTTAATGAAAAA GGCCACTGGC AGAT GCCGGTGAAC CCGCTTTATTTCACA TERM 5871 4513584 - 4513574 - g 81 -2.4 -5.43866 | opp_overlap 4513574 TAATGCTGAAAAAAA TGCC GAT GGCG TTTGGTTCTTTACGC SeD_A4656 4497933 - 4514612 + | putative Ig domain protein TERM 5872 4514621 - 4514644 + F 95 -12.4 -4.00868 | opp_overlap 4514620 4514617 4514613, overlap 4514622 CGCATAATAACGGAG GCCCCTCACC TTTG GGTGAGGGGG TTTACTTATGGATAA TERM 5873 4514622 - 4514643 + F 93 -15.9 -3.00039 | opp_overlap 4514620 4514617 4514613, overlap 4514621 GCATAATAACGGAGG CCCCTCACC TTTG GGTGAGGGG GTTTACTTATGGATA TERM 5874 4516506 - 4516517 + G 83 -5.8 -4.85599 | CGTAGTCTGAGTAGT GACG CCAG CGTC TTTTTATGGGATGAA SeD_A4657 4514652 - 4516718 + | putative ABC-type bacteriocin/lantibiotic exporter, contain an N- double-glycine peptidase domain TERM 5875 4516758 - 4516798 + F 93 -13.6 -3.55444 | opp_overlap 4516768, overlap 4516768 TCAGGTGGTACTGCT TAATAAAAAAGACCCGTT GCACA AACGGGTCTTTTTTGTCA TTTAACGAGTCGGCA TERM 5876 4516788 - 4516768 - f 100 -11.2 -5.4505 | opp_overlap 4516758 4516768 CTGCTTAATAAAAAA GACCCGTT GCACA AACGGGTC TTTTTTGTCATTTAA TERM 5877 4516768 - 4516788 + F 100 -11.2 -5.42265 | opp_overlap 4516768, overlap 4516758 CTGCTTAATAAAAAA GACCCGTT GCACA AACGGGTC TTTTTTGTCATTTAA TERM 5878 4518376 - 4518388 + G 77 -4.8 -4.88067 | GGGAATGTATGATAC GGTG ACCAA CACC TTTTTCTCCCTGAGT TERM 5879 4518760 - 4518799 + G 70 -6.6 -4.1822 | gap 2 CGAAGCGCTATTGCG TTGGC-CGGGCT-ATCAC GGTCCG GTGATGAGCCCGTGCGAA TTTATTCCGCTGGCG TERM 5880 4519422 - 4519395 - g 91 -11.2 -4.30719 | overlap 4519396 CCTGGTTACAACAAA CGCCCGCGCCTC TGAC GATACGCGGGCA GAGGCCCTACAGGCG TERM 5881 4519421 - 4519396 - g 83 -12.5 -3.1811 | overlap 4519395 CTGGTTACAACAAAC GCCCGCGCCTC TGAC GATACGCGGGC AGAGGCCCTACAGGC SeD_A4659 4517840 - 4519441 + | cyclic diguanylate phosphodiesterase (EAL) domain protein SeD_A4660 4519752 - 4519429 - | transposon tn10 tetd protein soxR 4519839 - 4520297 + | redox-sensitive transcriptional activator SoxR TERM 5882 4520333 - 4520358 + F 100 -13.4 -4.4572 | opp_overlap 4520333 4520338 TGAGTTCACCTAAAA CTAAAGCGCC GCTAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5883 4520358 - 4520333 - f 95 -13.4 -4.1899 | opp_overlap 4520333, overlap 4520338 TGAGTTCACCTAAAA CTAAAGCGCC GCTAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5884 4520353 - 4520338 - f 76 -7.5 -4.21922 | opp_overlap 4520333, overlap 4520333 TCACCTAAAACTAAA GCGCC GCTAAG GGCGC TTTAGTTTGTTTCCG SeD_A4662 4520590 - 4521258 + | glutathione S-transferase, N- domain TERM 5885 4522125 - 4522106 - g 74 -4.8 -4.72272 | CCTGGTCATTAAAAA CCCGCTGG ATGG CCTGCCGG TCGCGCTGGGCGATT TERM 5886 4522911 - 4522927 + G 74 -4.3 -4.82901 | GGAACTGTCGTCATT GCGGTCG CGC TGGTCGC TTTTTATGCCGGCGG SeD_A4663 4521606 - 4522955 + | inorganic anion transporter, sulfate permease (SulP) family TERM 5887 4522970 - 4523002 + F 100 -13.6 -4.07885 | gap 1, opp_overlap 4522977, overlap 4522977 GTTCTGCCTTCATTT TGAAAAACGGGCGGC GTTG GTCGCCCGTTTT-CA TTTTCAGGACACATC TERM 5888 4522977 - 4522996 + F 100 -12.8 -4.67038 | opp_overlap 4522977, overlap 4522970 CTTCATTTTGAAAAA CGGGCGGC GTTG GTCGCCCG TTTTCATTTTCAGGA TERM 5889 4522996 - 4522977 - f 93 -10.6 -4.59773 | opp_overlap 4522977 4522970 CTTCATTTTGAAAAA CGGGCGGC GTTG GTCGCCCG TTTTCATTTTCAGGA TERM 5890 4523223 - 4523239 + G 70 -6.5 -4.09556 | overlap 4523224 4523234 TCGCCATTGGCGCGC TGTTGGC GTG GCCGACG TTTGGTTTGCATGTG TERM 5891 4523597 - 4523655 + G 70 -9.4 -3.62746 | opp_overlap 4523597 4523598 CTGGTATCGCTGAAA TTCGCCGTCGCGGTGGCGATGGGGACGA TGG TCTTTACCGTCGGCGGCGCGACGCTGGA ATTTTTTAAGGTCGC SeD_A4664 4523060 - 4524751 + | Na+/H+ antiporter SeD_A4666 4525733 - 4524846 - | LysR family regulatory protein SeD_A4665 4525732 - 4526247 + | LrgA family protein TERM 5892 4526721 - 4526740 + G 76 -5 -4.73448 | gap 1, overlap 4526723 4526732 4526736 CTGGCGTGTTTGGCA TGGCG-GTC GGC GACGCGCTA TTTTTGCGTCTCTCT SeD_A4667 4526240 - 4526929 + | LrgB family protein actP 4528617 - 4526968 - | cation/acetate symporter ActP SeD_A4669 4528928 - 4528614 - | hypothetical protein TERM 5893 4528850 - 4528865 + g 73 -5.4 -4.64598 | overlap 4528851 TAACCGACAGAATCG TGGCAA ACCG TTGCCG TTTTTCAACTAATTC TERM 5894 4528989 - 4529031 + r 73 -11.3 -2.53213 | gap 1, overlap 4528994 GCGTTGGCCGCACTC GCGCGCCC-CAGCCACATAG TGAA CTATGCTGCTGAGGGTGTGC TCGCTTGCCGCCTTC acsA 4531126 - 4529168 - | acetate--CoA ligase TERM 5895 4530844 - 4530860 + g 84 -8.7 -4.26076 | opp_overlap 4530844 CGCCTTCCCAGATAA TGGCGGT GCG ATCGCCA TTTTCCTGCAAATGG TERM 5896 4531539 - 4531518 - H 91 -7.3 -5.4588 | overlap 4531508 4531519 GAAAACGATAAAAAA TCGCCATTA AAGA TAATGGCGC AATCTGGATGAGACC TERM 5897 4531538 - 4531519 - H 84 -10.8 -3.85088 | overlap 4531508 4531518 AAAACGATAAAAAAT CGCCATTA AAGA TAATGGCG CAATCTGGATGAGAC TERM 5898 4531700 - 4531683 - g 72 -4.1 -4.74103 | TGTTGAAGCGAAAAA TGAAACG TTCG CGCCTCA ACACCCCGACCAATA TERM 5899 4532949 - 4532939 - g 70 -6.8 -4.08945 | AGGACTTCCTGAAAA CGGT CGT ACCG CAGTGGGAAGATCAG nrfA 4531558 - 4532994 + | formate-dependent cytochrome c nitrite reductase, c552 subunit nrfB 4533106 - 4533672 + | cytochrome c nitrite reductase, pentaheme subunit TERM 5900 4534168 - 4534152 - g 76 -10.8 -3.71108 | opp_overlap 4534151 4534147, overlap 4534141 AAAACCAACCTGAAA GCGGGC AAACA GCCCGC CTGCGTTGAGTCATG nrfC 4533669 - 4534340 + | cytochrome c nitrite reductase, Fe-S protein TERM 5901 4535240 - 4535254 + G 76 -3.4 -5.05712 | overlap 4535220 GCCAGTTTGACCGGC GTGCTG TTG CTGCGC TTTTTCATTCTTTAT nrfD 4534337 - 4535293 + | cytochrome c nitrite reductase, NrfD subunit ccmF 4535286 - 4537508 + | cytochrome c-type biogenesis protein CcmF TERM 5902 4537743 - 4537725 - g 85 -2.4 -5.4505 | gap 1, overlap 4537726 4537727 GGCTGCAAGAAAAAA TCC-GCG CCAATC CGCAGGA TAGCGAGCAATGGGC SeD_A4676 4537505 - 4538125 + | formate-dependent nitrite reductase complex subunit NrfG TERM 5903 4539089 - 4539100 + G 83 -7.2 -4.63527 | overlap 4539088 TGGTGATGCGCTATG CGCC AGTG GGCG TTTTTGCGCTGATCG TERM 5904 4539744 - 4539727 - g 86 -6.9 -5.0538 | TTTGACCGCAAAAAA GCGCTGG CCTA CGAGCGC GACGTGCTGGGCAAA SeD_A4677 4538470 - 4539780 + | proton glutamate symport protein SeD_A4678 4540627 - 4539938 - | tetratricopeptide repeat protein TERM 5905 4540430 - 4540447 + g 75 -6.2 -4.57073 | overlap 4540429 CGCGCAGGCGTCGGC GTCGCC ACTGTC GGCGGC TTTTTGCGCCCAGTA TERM 5906 4540623 - 4540633 + g 75 -4 -4.88918 | AATGCAAGAAGTAGT TTCA TTT TGAA TTTTATTTAGGGTAC TERM 5907 4540706 - 4540687 - R 100 -13.6 -5.64274 | opp_overlap 4540687 GTATGGATAAAAAAA CAGCCTCC GGAC GGAGGCTG TTATAGGGAAAATGC TERM 5908 4540687 - 4540706 + r 86 -13.6 -3.29144 | opp_overlap 4540687 GTATGGATAAAAAAA CAGCCTCC GGAC GGAGGCTG TTATAGGGAAAATGC TERM 5909 4541090 - 4541123 + r 82 -11.1 -3.57144 | gap 1 ACCAGCGCTTCATCT TCAATGCC-CAGACGC GCG GCGTCGGCGGTATTGA TTTGCGCATAGCCCG TERM 5910 4541637 - 4541648 + r 74 -7.2 -4.30576 | opp_overlap 4541629 GTAAAATCACATCCG CCGC CGAC GCGG TTTTGGTCATGAAGA TERM 5911 4543313 - 4543280 - R 93 -13.8 -3.55219 | AACGCCAGGATAGAA CAGGCCGCGGCAGG CAGTTT CATACCGCGGCCCG GCTTCAGAGGAGGCT SeD_A4681 4544225 - 4543317 - | membrane-bound beta-hydroxylase SeD_A4682 4544917 - 4544483 - | protein PhnO SeD_A4683 4545512 - 4545069 - | protein PhnB phnA 4545967 - 4545632 - | alkylphosphonate utilization operon protein PhnA TERM 5912 4546671 - 4546683 + G 70 -6.9 -4.1421 | overlap 4546672 TCCCTTCCTGATTCG TCCGC TCG GCGGG TTATTCTTTGGTATG TERM 5913 4547069 - 4547059 - g 77 -8.2 -4.08064 | overlap 4547060 AATCGTCCGTTAAAA GGCG CAA CGCC AGCGGCGTCGGACAT SeD_A4685 4546435 - 4547220 + | proline/betaine transporter TERM 5914 4547332 - 4547348 + T 72 -5.1 -4.6645 | overlap 4547333 ACGACCCTGTGTAGT GTGCTGA TTG TCAGCAG TTTTATCTATGTGTG TERM 5915 4547409 - 4547424 + T 77 -9 -3.96483 | opp_overlap 4547404, overlap 4547404 TTTTTCAACAGCACC CAGGCA CGGG TGCCTG TTCTTTCCGTACGGT SeD_A4686 4548466 - 4547387 - | sensor protein BasS/pmrB TERM 5916 4548105 - 4548157 + g 73 -5.5 -4.66833 | gap 1 TCAATCTCAAGCGTG GAGCTGTGAATGGCGATCGGCG CCAGATTATC CGCCGTCCGCGCTTC-CAGCTC TTTTTGCAGTTCGGC SeD_A4687 4549135 - 4548467 - | transcriptional regulatory protein BasR/pmrA TERM 5917 4550057 - 4550027 - R 83 -9.1 -4.2074 | gap 1, opp_overlap 4550028, overlap 4550023 CCGCCAAGAGAGAAA TCATCGCCGCGCGA GGTT TCGC-CAACGATGA GAATCGTCAGGTTTT TERM 5918 4550528 - 4550504 - R 79 -4.1 -5.13343 | overlap 4550506 4550507 TAAGTCAAAATAAAA TACTGCGCGGC AGC GCCGACCAGAA TAAAAACGCAGGCCA TERM 5919 4550516 - 4550506 - R 71 -6.8 -4.17301 | overlap 4550504 4550507 AGTCAAAATAAAATA CTGC GCG GCAG CGCCGACCAGAATAA TERM 5920 4550856 - 4550881 + r 82 -13.3 -3.0634 | CTTAATGTTGGTGGC GGCCGGATAAC CTGC GCTATCCGGCC TGTTGCGATAACATT SeD_A4689 4552246 - 4550909 - | arginine/agmatine antiporter TERM 5921 4551488 - 4551465 - G 70 -8.8 -3.64703 | gap 1, opp_overlap 4551485, overlap 4551420 GCCGCGTCACCGAAA GGCGATGC-CG ACA CGCGCAGCGCC GCGTTGGGGATCATC SeD_A4690 4553117 - 4552386 - | porin thermoregulatory protein EnvY TERM 5922 4553365 - 4553346 - R 100 -12.1 -5.60993 | TTTTGTATAAAAAAA GCGCGGG ATGGGG CCCGCGC AAAAAGGTATGACAG adiA 4555715 - 4553445 - | biodegradative arginine decarboxylase TERM 5923 4554800 - 4554817 + g 89 -3.4 -5.60993 | CGGCTTTAGTTTTGG TCAGTG GGCTGG CGCTGA TTTTTTTCTGCAAGG TERM 5924 4555412 - 4555424 + g 76 -5.5 -4.70659 | overlap 4555410 GCAGGTCGCGGTCCA GCGAT GCC GTCGC TTTTTCCCTGTCGCC TERM 5925 4555884 - 4555916 + r 86 -4.8 -5.48825 | overlap 4555887 TTATTGATATCGAGC GATTTCACCTGCCG TTTAT CGACAGGTGAATTA TTTTTTTGGCTGATA TERM 5926 4555887 - 4555913 + r 100 -10.9 -4.8236 | overlap 4555884 TTGATATCGAGCGAT TTCACCTGCCG TTTAT CGACAGGTGAA TTATTTTTTTGGCTG SeD_A4692 4556835 - 4555945 - | melibiose operon regulatory protein SeD_A4693 4557146 - 4558501 + | alpha-galactosidase TERM 5927 4559367 - 4559383 + G 93 -8.7 -4.74706 | CTACTTCACCTATGT GATTGGC GAT GCCGATC TTTTTCCCTATTACC TERM 5928 4559803 - 4559817 + G 73 -5.7 -4.41137 | opp_overlap 4559802, overlap 4559796 CAGTCTGCGCAAACC CTGCA GGGGA TGCAG TTTATTATGATTGTC SeD_A4694 4558585 - 4560015 + | melibiose carrier protein TERM 5929 4560072 - 4560047 - T 82 -11.9 -3.30124 | gap 1 GTGCAGGCCGGATAA GCCGGATAAGCG TAG CGC-CATCCGGC AATTAACCGATAACG fumB 4561763 - 4560117 - | fumarate hydratase class I, anaerobic dcuB 4563199 - 4561859 - | anaerobic C4-dicarboxylate transporter DcuB TERM 5930 4562295 - 4562306 + g 80 -4.4 -5.0538 | GCAATCATACCGGAA CGAA AAAC TTCG TTTTTTGAGATAGAC SeD_A4697 4563519 - 4563346 - | putative cytoplasmic protein TERM 5931 4563439 - 4563459 + g 78 -6.9 -4.64024 | overlap 4563440 CAGTAAATTATGATT TGTCTGTTT TAA AAACAGGCG TTTATTATTTGATTT TERM 5932 4563773 - 4563759 - R 100 -11.4 -4.98531 | opp_overlap 4563761 TTTTGAAATTAAAAA CAGCGC AGA GCGCTG TAATAATAGAAAATA SeD_A4698 4564648 - 4563929 - | response regulator TERM 5933 4564464 - 4564491 + g 72 -11.4 -3.09193 | AGATCCAATCCGTTT TCCTGCTGCATA TAGA TATCCAGCAGGA TTAGGTCAATGTGAT SeD_A4699 4566276 - 4564645 - | sensor protein DcuS TERM 5934 4564783 - 4564803 + g 71 -4.6 -4.58395 | opp_overlap 4564769 4564773 4564770, overlap 4564771 4564777 ACCGACGCCGCGTTC GGCGCCTT TCGAC GAGACGCC TTTTTCAAAAATCGC TERM 5935 4565098 - 4565080 - G 70 -3 -4.7497 | CTTACTGAGCAAAAA GCCAGCGA TAA TCGGCGAC TTTATTTTACCCAGC TERM 5936 4566036 - 4565995 - G 93 -4.3 -5.50774 | gap 1, opp_overlap 4566012, overlap 4565997 CACAATAAACAAAAA GCCATTATGCTGGCTCACCG CTT CGGCGAGCG-GCTGAATGCC GCTTTCCGCAGGCGG TERM 5937 4566012 - 4566051 + g 100 -14.3 -5.0133 | gap 1, opp_overlap 4565997 4565995 CATTATGCTGGCTCA CCGCTT-CGGCGAGCGGC TGAAT GCCGCTTTCCGCAGGCGG TTTTTTCAGCCCCTC TERM 5938 4566226 - 4566195 - G 100 -10.2 -5.10933 | gap 1, opp_overlap 4566194 4566193, overlap 4566180 GCACCGAAAACAAAA CGGCGCTGACCATCA GAA TGACGGT-AGTGCCG AGTTTCATGGGGCGT TERM 5939 4566662 - 4566647 - g 100 -5.4 -5.96894 | ATGGAAATAAAAAAA TGGCTG AACA CAACCA TAACCCGACGTGATG TERM 5940 4568628 - 4568644 + G 74 -6.5 -4.36914 | opp_overlap 4568619 4568628 CAGAAGGCGAGCGAA TTCCCGC ATT GCCGGAA TTTTGTCCGGCGAAA SeD_A4700 4566632 - 4569061 + | anaerobic dimethyl sulfoxide reductase chain a dmsB 4569075 - 4569701 + | dimethylsulfoxide reductase, chain B TERM 5941 4569738 - 4569750 + G 71 -6.2 -4.36554 | overlap 4569737 GGTCTTTACCCAGAG CGCG GTCGG CGCG TTTATTCTGCTGCTG dmsC 4569694 - 4570467 + | dmso reductase anchor subunit TERM 5942 4570456 - 4570467 + T 70 -2.2 -5.03747 | TACAATCTGTGGACG CTGC CAAT GTAG TTTTTTGCCCGGTTT TERM 5943 4570831 - 4570844 + T 72 -3.1 -5.0538 | gap 1 ATGGGGGAAACCACC GC-CGA TTA TCGAGC TTTTTTACAGTCGCA TERM 5944 4571183 - 4571212 + T 100 -15.8 -3.92592 | overlap 4571176 4571184 ATACTTGTGCCGCCA TTGTGCCCGCTG TTGCGT CAGCGGGCACAG TTTACTATTACAGCT TERM 5945 4571184 - 4571211 + T 100 -17.1 -2.95073 | overlap 4571176 4571183 TACTTGTGCCGCCAT TGTGCCCGCTG TTGCGT CAGCGGGCACA GTTTACTATTACAGC SeD_A4704 4572620 - 4571220 - | hypothetical protein SeD_A4705 4572646 - 4572759 + | hypothetical protein TERM 5946 4572950 - 4572925 - f 73 -7.5 -4.16842 | opp_overlap 4572924, overlap 4572926 TTTATTTTTAAGAAA TGCGTTACGAC ATCA GTCGTGACGCG ATCTGCTATGGATTT TERM 5947 4572949 - 4572926 - f 75 -11 -3.09784 | opp_overlap 4572924, overlap 4572925 TTATTTTTAAGAAAT GCGTTACGAC ATCA GTCGTGACGC GATCTGCTATGGATT TERM 5948 4573542 - 4573532 - g 76 -5.4 -4.79826 | AGAGATGAGCAAAAA TGGT ATC ACCA GAGCGTTGCCTTCTG SeD_A4706 4572969 - 4573829 + | SdiA-regulated family protein TERM 5949 4573998 - 4574017 + T 100 -10.7 -5.97575 | GTCCTCCTCATATTT GCGGCAG CGTAGT CTGCCGC TTTTTTTTATAAATT SeD_A4707 4574311 - 4574123 - | hypothetical protein SeD_A4708 4574561 - 4574400 - | putative cytoplasmic protein TERM 5950 4574453 - 4574487 + g 73 -10.8 -3.4252 | opp_overlap 4574464 TCGGTGTATTGATGT TAGTGATATTATCGCC TCC GGCGCCGATATCACTA TTATCCTCCATGGAA SeD_A4709 4574910 - 4574638 - | putative GerE family regulatory protein SeD_A4710 4575797 - 4574922 - | AraC family regulatory protein TERM 5951 4575862 - 4575837 - H 72 -2.7 -4.98531 | overlap 4575830 4575840 CGTGTAAATCAAAAA TTATTCTGAAA AATA TTTCAAAAAAA CTAATATATAGCTAT SeD_A4712 4576600 - 4576893 + | hypothetical protein TERM 5952 4577004 - 4577018 + G 77 -7.8 -4.24786 | AAAAATCAGACCACT GGTGCG TCC CGTACC TTTGTGTGTTGTGGC SeD_A4713 4576890 - 4577381 + | acetyltransferase, gnat family SeD_A4714 4578381 - 4577629 - | putative acid phosphatase SeD_A4715 4578558 - 4578424 - | hypothetical protein TERM 5953 4578480 - 4578469 - G 90 -5.8 -5.14477 | CATACAGGTAAAAAA GCAG GACG CTGC ACTGGTATTATTGTC TERM 5954 4578794 - 4578781 - g 87 -2.3 -5.72622 | overlap 4578782 CCGACAAAGAAAAAA TGCCA AAAC TGGCG AAGGGATTATTGTTT SeD_A4716 4578780 - 4578923 + | hypothetical protein TERM 5955 4579085 - 4579056 - T 90 -14.5 -3.22906 | gap 1, opp_overlap 4579062, overlap 4579062 CCATTCCCAGAAAAG CA-AAAACCCAGCC ATA GGCTGGGTTTTCTG AATAAGTGGTGCCCG TERM 5956 4579078 - 4579062 - T 100 -13.7 -5.1417 | opp_overlap 4579062, overlap 4579056 CCAGAAAAGCAAAAA CCCAGCC ATA GGCTGGG TTTTCTGAATAAGTG TERM 5957 4579062 - 4579078 + T 100 -13.7 -4.431 | opp_overlap 4579062 4579056 CCAGAAAAGCAAAAA CCCAGCC ATA GGCTGGG TTTTCTGAATAAGTG TERM 5958 4579125 - 4579141 + T 73 -10.9 -2.62616 | opp_overlap 4579124 4579122 4579119 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA SeD_A4718 4579858 - 4579283 - | transcriptional regulator, TetR family dsbD 4581598 - 4579895 - | thiol:disulfide interchange protein DsbD TERM 5959 4580733 - 4580722 - G 81 -3.6 -5.18726 | opp_overlap 4580730, overlap 4580724 CCCCCATAACAAAAA CACC GCCG GGCG AGCCGCCTTGCTGAC TERM 5960 4581150 - 4581178 + g 71 -10.2 -3.17075 | opp_overlap 4581147, overlap 4581149 TGGGTGACAGCAGGC GTCGGCGTGGCG TCTAT TGCCGCGGCGAC TTCACTTAGCGGCAC TERM 5961 4581503 - 4581491 - G 74 -2.6 -5.02421 | overlap 4581493 AAAATCAAAAACAAA CGCC CGGTC GGCA GGGACGAACTGCGAG cutA 4581921 - 4581574 - | divalent-cation tolerance protein CutA TERM 5962 4582031 - 4582009 - R 93 -14.8 -3.30635 | overlap 4582010 CAAAGGGCGGGAGAA TGCGGGGCGT GAT ACGCCCCGCG GGTGAAACACTTACA TERM 5963 4582030 - 4582010 - R 100 -18.3 -2.5806 | overlap 4582009 AAAGGGCGGGAGAAT GCGGGGCGT GAT ACGCCCCGC GGGTGAAACACTTAC dcuA 4583343 - 4582042 - | anaerobic C4-dicarboxylate transporter DcuA TERM 5964 4583413 - 4583437 + r 95 -12.9 -3.79251 | opp_overlap 4583415, overlap 4583415 CTTCTTGTAAGAAAA AAGGCACGTCA TCG TGACGTGCCTC TTTGGTACTACCCTG TERM 5965 4583435 - 4583415 - R 100 -15.5 -5.4505 | opp_overlap 4583415 4583413 TCTTGTAAGAAAAAA GGCACGTCA TCG TGACGTGCC TCTTTGGTACTACCC TERM 5966 4583415 - 4583435 + r 100 -15.5 -3.48024 | opp_overlap 4583415, overlap 4583413 TCTTGTAAGAAAAAA GGCACGTCA TCG TGACGTGCC TCTTTGGTACTACCC aspA 4584894 - 4583458 - | aspartate ammonia-lyase TERM 5967 4584323 - 4584335 + g 74 -7.7 -4.13282 | overlap 4584314 ACGGCGTCCTGCAAC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 5968 4584758 - 4584773 + g 74 -3.2 -4.92757 | opp_overlap 4584758, overlap 4584753 ATGCCACGCACAAAT TCAGGG ATGT CGCTGA TTTTGTTATTGCTAA TERM 5969 4585215 - 4585197 - H 76 -8.8 -3.66874 | opp_overlap 4585197 GCAACCCCATTCAAA TGGTCGTC GCA GACGGCCA TGACTTACAGGAGAG TERM 5970 4585197 - 4585215 + H 73 -11 -2.52464 | opp_overlap 4585197 GCAACCCCATTCAAA TGGTCGTC GCA GACGGCCA TGACTTACAGGAGAG TERM 5971 4585386 - 4585396 + G 72 -4 -4.77036 | TGGTACGTAACCAGG GTTT TAA AAAC TTTTTGCTGATGCAA TERM 5972 4585418 - 4585396 - g 75 -6.4 -4.57569 | overlap 4585397 CCAGGGTTTTAAAAA CTTTTTGCTG ATG CAACAAAAAA TGGCGGCCGGTGAGA TERM 5973 4585444 - 4585419 - g 85 -2.5 -5.4833 | gap 1, overlap 4585420 4585421 TGATGCAACAAAAAA TGGCGGCCGG TGAGAGC CCGGCGGC-A GAAATGATTAAGAGT TERM 5974 4585488 - 4585501 + G 71 -4.5 -4.61527 | overlap 4585497 TCGCTGGCTTACTGC TCCTG TTGC CGGGA TTTTTCACCGATTTT SeD_A4724 4585235 - 4585711 + | FxsA protein TERM 5975 4585761 - 4585721 - T 78 -12.1 -2.98802 | gap 2, opp_overlap 4585736, overlap 4585736 GATTAAAGGTAGAGA TGCTGGCCGGATAAGTCGC GTGAG GCG--TTATCCGGCCAACA GATACGTCTTACGCC SeD_A4725 4587032 - 4585770 - | inner membrane protein YjeH TERM 5976 4587129 - 4587141 + H 74 -3.3 -5.08824 | opp_overlap 4587129 AACGTGAGATAAGTA GCGTT TTT ACCGC TTTTTTCGCTCAGAA groS 4587287 - 4587580 + | chaperonin GroS TERM 5977 4588635 - 4588607 - g 74 -9.5 -3.72374 | overlap 4588605 TGTGATCAACAAAGA CACCACCACCATC ATT GATGGCGTGGGTG AAGAAGCTGCCATCC groL 4587624 - 4589270 + | chaperonin GroL TERM 5978 4589407 - 4589442 + F 100 -18.4 -4.37971 | opp_overlap 4589413, overlap 4589413 TTATCTCCCAGAATT GAGAAACCCCCGGGCA GAAA TGACCGGGGGTTTTTC TTTTAGTCATCTTTT TERM 5979 4589413 - 4589436 + F 100 -13.8 -5.50723 | opp_overlap 4589413, overlap 4589407 CCCAGAATTGAGAAA CCCCCGGGCA GAAA TGACCGGGGG TTTTTCTTTTAGTCA TERM 5980 4589436 - 4589413 - f 100 -13.8 -4.00066 | opp_overlap 4589413 4589407 CCCAGAATTGAGAAA CCCCCGGGCA GAAA TGACCGGGGG TTTTTCTTTTAGTCA SeD_A4728 4589514 - 4589867 + | putative lipoprotein TERM 5981 4589870 - 4589920 + T 76 -8.5 -4.1899 | gap 2, overlap 4589872 4589881 4589883 ATGTCCGAATTGATA TGTCTGGATCGTAACGCCCTCTGAA AGA TTCAGAGGGCGATATGGTT-AG-CG TTTTCCCTGCGATGA TERM 5982 4589872 - 4589919 + T 70 -10 -3.11073 | gap 1, overlap 4589870 4589881 4589883 GTCCGAATTGATATG TCTGGATCGTAACGCCCTCTGAA AGA TTCAGAGGGCGATATGGTT-AGC GTTTTCCCTGCGATG TERM 5983 4589881 - 4589911 + T 100 -17 -2.78738 | overlap 4589872 4589870 4589883 GATATGTCTGGATCG TAACGCCCTCTGAA AGA TTCAGAGGGCGATA TGGTTAGCGTTTTCC TERM 5984 4589883 - 4589909 + T 93 -15.2 -2.93361 | overlap 4589881 4589872 4589870 TATGTCTGGATCGTA ACGCCCTCTGAA AGA TTCAGAGGGCGA TATGGTTAGCGTTTT SeD_A4729 4590772 - 4589915 - | putative inner membrane protein TERM 5985 4590477 - 4590494 + g 74 -7.7 -4.14472 | opp_overlap 4590477 4590475 GCTAAAGATTCAACA CGCTGAT TAAC ATCGGCG TTTTCCAGCTCTTCA SeD_A4730 4592082 - 4591054 - | KamA family protein TERM 5986 4591641 - 4591660 + g 74 -10 -3.75598 | CGGCGATATACTCCA GCGCGACT GTCC AGTTGCGC TTATTGCCTTGATTC TERM 5987 4591922 - 4591910 - G 78 -6.9 -4.63486 | overlap 4591911 4591912 ATGCGCGCAATAAAA GCGCG CGG CACGC GGAGGGCAAACAAGC efp 4592123 - 4592689 + | translation elongation factor P TERM 5988 4592706 - 4592733 + F 89 -6.2 -5.41143 | opp_overlap 4592709, overlap 4592707 4592709 TTACGTTATCGGGAA AAATGGTGCAGC GTAT GCTGCGCCATCC TTTTTTTCGCGCCTC TERM 5989 4592707 - 4592732 + F 80 -9.7 -3.83963 | opp_overlap 4592709, overlap 4592706 4592709 TACGTTATCGGGAAA AATGGTGCAGC GTAT GCTGCGCCATC CTTTTTTTCGCGCCT TERM 5990 4592730 - 4592709 - g 91 -10.1 -4.59773 | opp_overlap 4592707 4592706 4592709 CGTTATCGGGAAAAA TGGTGCAGC GTAT GCTGCGCCA TCCTTTTTTTCGCGC TERM 5991 4592709 - 4592730 + G 81 -12.3 -3.49966 | opp_overlap 4592709, overlap 4592707 4592706 CGTTATCGGGAAAAA TGGTGCAGC GTAT GCTGCGCCA TCCTTTTTTTCGCGC SeD_A4732 4592708 - 4592884 + | putative entericidin A TERM 5992 4593076 - 4593062 - f 75 -11.4 -3.02461 | overlap 4593065 TAACTGCTTGTAATA CCACGC GCG GCGTGG GCGAGGACATCTCGG TERM 5993 4593139 - 4593176 + F 79 -8.6 -4.36914 | gap 1, opp_overlap 4593142 4593146, overlap 4593146 AGAGCTCAGCAGTAA TC-ATCAACGGTACGGC ATGGC GTCGTACCGTTAATCGA TTTTCTCCGGAAGCA TERM 5994 4593172 - 4593142 - f 74 -11.2 -2.80016 | opp_overlap 4593139 4593146, overlap 4593146 GCTCAGCAGTAATCA TCAACGGTACGGCA TGG CGTCGTACCGTTAA TCGATTTTCTCCGGA TERM 5995 4593146 - 4593168 + F 77 -11.3 -3.28857 | opp_overlap 4593142 4593146, overlap 4593139 AGCAGTAATCATCAA CGGTACGGC ATGGC GTCGTACCG TTAATCGATTTTCTC TERM 5996 4593168 - 4593146 - f 71 -9.8 -3.29364 | opp_overlap 4593146 4593139, overlap 4593142 AGCAGTAATCATCAA CGGTACGGCA TGG CGTCGTACCG TTAATCGATTTTCTC SeD_A4734 4593837 - 4593965 + | hypothetical protein SeD_A4736 4594880 - 4594347 - | outer membrane lipoprotein blc TERM 5997 4594413 - 4594424 + g 83 -5.8 -4.93877 | overlap 4594398 CCGGGTCGCGACGGC CAGC ATTT GCTG TTTTATTTCCTCAGA TERM 5998 4594981 - 4594953 - R 100 -17.6 -5.83211 | CAGGAAAAGAAAAAA CGCCCTCTTATC GGGTA GATAAGAGGGCG TCGTGGCAACTTAGA SeD_A4737 4595351 - 4594992 - | fumarate reductase subunit D TERM 5999 4595218 - 4595200 - G 70 -6.6 -4.08945 | overlap 4595201 4595204 AGTACGCGCTCAAAA CTCAGGGC ATC GCCCGGAA ATAGCCCCAGCGGCA TERM 6000 4595281 - 4595249 - G 76 -12.7 -2.74012 | GCATGATGCCAACCA GTAGCACGATCACCG GCG CGATGATCGCGCCCC ACATACCGCCTGCGC frdC 4595757 - 4595362 - | fumarate reductase, cytochrome b subunit frdB 4596502 - 4595768 - | fumarate reductase, iron-sulfur protein frdA 4598285 - 4596495 - | fumarate reductase, flavoprotein subunit SeD_A4741 4598608 - 4599585 + | lysyl-tRNA synthetase homolog TERM 6001 4599607 - 4599641 + F 70 -10.1 -3.11448 | opp_overlap 4599616 4599628, overlap 4599616 AATTCACTCTTTCGC GAGATAAAATGGCGC AATAA GCGCCATTTTATAGC ATATTTTTTCAATTA TERM 6002 4599632 - 4599616 - f 86 -9.4 -4.52589 | opp_overlap 4599607 4599616, overlap 4599628 TTTCGCGAGATAAAA TGGCGC AATAA GCGCCA TTTTATAGCATATTT TERM 6003 4599616 - 4599632 + F 86 -9.4 -4.43221 | opp_overlap 4599616 4599628, overlap 4599607 TTTCGCGAGATAAAA TGGCGC AATAA GCGCCA TTTTATAGCATATTT TERM 6004 4599944 - 4599954 + G 85 -2.4 -5.5074 | CGTGGTATATATTTT CTGC CTT GCTG TTTTTTATTCCATTC TERM 6005 4600337 - 4600351 + G 80 -5 -4.91084 | ATTTAGTTTTATTGT TAGTGA GTG TCGCTA TTTTGTTATTAAATG TERM 6006 4601217 - 4601232 + G 73 -9 -3.82824 | CAGCGCCTTGTGGAT GATCGG TGGG CCGATC TTCTTCTCGCTGCTG SeD_A4742 4599832 - 4601313 + | inner membrane transporter YjeM SeD_A4743 4601365 - 4601679 + | inner membrane protein YjeO SeD_A4744 4605072 - 4601746 - | mechanosensitive ion channel family protein TERM 6007 4602262 - 4602277 + g 80 -9 -4.07885 | AATGGTCACCGTATC GCCGAT ACGA ATCGGC TTTTCAAACAAAATA TERM 6008 4603110 - 4603122 + g 100 -10.5 -5.03314 | opp_overlap 4603108 4603106 4603104 4603110 CTTTATCAAGATAGA GCGGG ATG CCCGC TTTTTTCAGACTCAG TERM 6009 4604589 - 4604635 + g 79 -7.3 -4.4261 | CGGCACTTCCGCCTG CGGCGCCGAGTCGTC-GCTCAAT CTC ATTAAGCTGGCGGCG-GGCGTCG TTTTGCTGTTGGGGA psd 4606059 - 4605091 - | phosphatidylserine decarboxylase rsgA 4607203 - 4606151 - | ribosome small subunit-dependent GTPase A SeD_A4747 4607310 - 4607855 + | oligoribonuclease TERM 6010 4607899 - 4607865 - T 75 -11.5 -3.04144 | gap 1 CTGTGAGGCGTAACA TGCCGGATGGCAACGC CAGA GCGTCTC-ATCCGGCA GCTCTCCCGCCACTG SeD_A4748 4608657 - 4607917 - | arginine-binding periplasmic protein 2 TERM 6011 4608975 - 4608959 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6012 4609207 - 4609191 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6013 4609265 - 4609251 - RH 72 -8.6 -3.76413 | CTCCAAAATTTGAAA GTGCTT GTT AAGCAC AGACCACCAATCGCA TERM 6014 4609439 - 4609423 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA SeD_A4753 4610896 - 4609742 - | putative iron-sulfur cluster binding protein TERM 6015 4611562 - 4611574 + GH 87 -10.5 -4.07568 | opp_overlap 4611557 TGGCAAGCCAGACGC CGCCG CTC CGGCG TTTTGACGCGACGCA SeD_A4752 4610883 - 4612427 + | YjeF family protein TERM 6016 4612600 - 4612577 - gf 72 -3.8 -4.74504 | ACGGTAATGTAAAAA GCCCCACC TATACGCT GGTAGAGC CTTATGCGCTTGATA SeD_A4754 4612402 - 4612860 + | hypothetical protein TERM 6017 4613143 - 4613127 - g 83 -7.9 -4.60255 | ACAATCTGGTAAAAA CGATCCG TGC CGGAACG CCGAAAGATGCGCAA SeD_A4755 4612877 - 4614199 + | N-acetylmuramoyl-L-alanine amidase AmiB TERM 6018 4614261 - 4614249 - g 73 -9.1 -3.90291 | opp_overlap 4614255 AGCTTGCGAACCAAA TCGCC GCT GGCGA AGTGGTGGAACGCCC TERM 6019 4614431 - 4614404 - g 79 -3.2 -5.14563 | overlap 4614407 TGCGGCATTAAAAAA GAGGAGCTGGCG CTGG CGCTGGCCCGTC ATGCCACCAGTAAAA TERM 6020 4614850 - 4614833 - g 71 -4.8 -4.60889 | gap 1, overlap 4614835 AAGGACGGGCAAAAA GAGCGCC GGTTA GGCGC-C ATCTGCGGCACGCCG TERM 6021 4614849 - 4614835 - g 71 -8.5 -3.91506 | overlap 4614833 GGACGGGCAAAAAGA GCGCC GGTTA GGCGC CATCTGCGGCACGCC SeD_A4756 4614209 - 4616065 + | DNA mismatch repair protein MutL miaA 4616058 - 4617008 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 6022 4617119 - 4617146 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4617118 4617115, overlap 4617112 AATCTTTACAAGATC CGTTCCTGAACGC ATT GCGT-CGGGAACG TGTTCCAGTTTCTAT hfq 4617091 - 4617399 + | RNA chaperone Hfq TERM 6023 4618216 - 4618243 + G 74 -10.6 -3.53563 | TCGGTGAAACCGTTC TGGCGGATACGG TAGG CTTTATCCGCCA TTTACCGCACGATCT TERM 6024 4618567 - 4618582 + G 74 -10.4 -3.53012 | opp_overlap 4618576, overlap 4618566 TTTCCGGCGAGGTGG CGCAGC ATAC GCTGCG TTTGCCGCCGCAGGA hflX 4617471 - 4618751 + | GTP-binding protein HflX TERM 6025 4619283 - 4619272 - g 71 -7.2 -4.03811 | opp_overlap 4619271 4619272 4619278 4619282 TATACCATTAAAGAA GCCG AGCG CGGC GTTGTGACGCGTTTT TERM 6026 4619278 - 4619294 + G 71 -5.7 -4.30978 | opp_overlap 4619272, overlap 4619272 4619271 4619282 ATTAAAGAAGCCGAG CGCGGCG TTG TGACGCG TTTTGGTAAATTCAG TERM 6027 4620197 - 4620178 - g 83 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC GAAT GCGCAGCG TAACGACTACCAGCG hflK 4618966 - 4620225 + | HflK protein TERM 6028 4620309 - 4620325 + G 77 -7.2 -4.28762 | GTCAAAGAGGGCGAG CGCGGC ATTAC GCTGCG TTTTGGTAAAGTTCT hflC 4620228 - 4621232 + | HflC protein TERM 6029 4621258 - 4621293 + F 100 -14.2 -4.37092 | gap 1, opp_overlap 4621263, overlap 4621263 GCGGTTTTAGACCAG CAAAACCACCG-CATCC AAA GGATGCCGGTGGTTTTC TTTTATAAGGGCGAT TERM 6030 4621263 - 4621288 + F 100 -14.1 -5.18371 | gap 1, opp_overlap 4621263, overlap 4621258 TTTAGACCAGCAAAA CCACCG-CATCC AAA GGATGCCGGTGG TTTTCTTTTATAAGG TERM 6031 4621288 - 4621263 - f 100 -14.1 -4.33274 | gap 1, opp_overlap 4621258 4621263 TTTAGACCAGCAAAA CCACCG-CATCC AAA GGATGCCGGTGG TTTTCTTTTATAAGG SeD_A4762 4621311 - 4621508 + | hypothetical protein TERM 6032 4621981 - 4621971 - g 71 -8.2 -3.86194 | overlap 4621958 4621972 AACGCGCGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 6033 4622126 - 4622094 - g 73 -5.6 -4.56775 | opp_overlap 4622094 4622116, overlap 4622117 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4621611 - 4622909 + | adenylosuccinate synthetase TERM 6034 4622964 - 4622998 + F 78 -11.6 -3.10975 | gap 1 CAGTGTGATACATTG CTGTGTCGGGTAAGC CATTAC GCT-ATCCGACACAG TGTTAAATCCTCGCT nsrR 4623053 - 4623541 + | transcriptional repressor NsrR TERM 6035 4623703 - 4623678 - g 81 -6.8 -4.71482 | overlap 4623679 ACGAAACGTGAAAAA CCGGCCAGTC GCGAAG AACTGGCCGT AGAACTGAATATTGA TERM 6036 4623702 - 4623679 - g 73 -10.3 -3.41804 | overlap 4623678 CGAAACGTGAAAAAC CGGCCAGTC GCGAAG AACTGGCCG TAGAACTGAATATTG TERM 6037 4625839 - 4625825 - g 76 -2.7 -4.99134 | AGGTGAAAGTAAAAA CGCCG GTAAA CGTCG TCAGGTAGGTAAAAA TERM 6038 4625979 - 4625965 - g 71 -4.2 -4.54477 | overlap 4625967 CTAAAACGCAGAAAA TAGCCG CAG CGACCA AAGCGAAGCGTGCGG rnr 4623579 - 4626017 + | ribonuclease R TERM 6039 4626024 - 4626044 + F 73 -11.2 -2.64877 | opp_overlap 4626022 4626024, overlap 4626021 4626020 GCAGAGTGAGCAATA CCCTCTTC AAACA GAAGAGGG TGAATTATCTGTAGG TERM 6040 4626044 - 4626024 - f 77 -11.2 -3.16492 | opp_overlap 4626024 4626021 4626020, overlap 4626022 GCAGAGTGAGCAATA CCCTCTTC AAACA GAAGAGGG TGAATTATCTGTAGG TERM 6041 4626230 - 4626249 + G 73 -9.2 -3.79906 | GTTGCCGCTGATTCA CGCCCTTG AGTC CCAGGGCG TTGTTATCCAGCTGG SeD_A4766 4626108 - 4626839 + | RNA methyltransferase, TrmH family, group 3 TERM 6042 4626887 - 4626864 - f 74 -6 -4.63932 | opp_overlap 4626856 4626867, overlap 4626867 TATTTTTTAAGAAAA TAACCATCCA TAAT CGGATGGTTT TTTTTTATCTTTGGC TERM 6043 4626867 - 4626884 + F 100 -7 -6.38655 | opp_overlap 4626864 4626867, overlap 4626856 TTTTTAAGAAAATAA CCATCC ATAATC GGATGG TTTTTTTTTATCTTT TERM 6044 4626884 - 4626867 - f 79 -7.7 -4.43307 | opp_overlap 4626867 4626856, overlap 4626864 TTTTTAAGAAAATAA CCATCCA TAAT CGGATGG TTTTTTTTTATCTTT TERM 6045 4627058 - 4627043 - g 71 -4.8 -4.61868 | TATTGATATAGAAAA TAATGA GTCT TCATTA ATAATAAAAATGAAT SeD_A4767 4626972 - 4627376 + | putative cytoplasmic protein SeD_A4768 4627391 - 4628089 + | PspA/IM30 family protein TERM 6046 4628142 - 4628163 + F 71 -7.9 -3.86524 | gap 1, overlap 4628144 TTTGTCCAGACTGAC CTGGCCC-GC TTT GCTGGGCCTG TTTATCGGGCAGTAT TERM 6047 4628144 - 4628161 + F 72 -9.1 -3.52113 | gap 1, overlap 4628142 TGTCCAGACTGACCT GGCCC-GC TTT GCTGGGCC TGTTTATCGGGCAGT TERM 6048 4628172 - 4628182 + F 77 -6.8 -4.41114 | GGGCCTGTTTATCGG GCAG TAT CTGC TTTGTTATCTGGTGC TERM 6049 4629204 - 4629193 - g 74 -7.2 -4.17048 | TGCTCGGTAAAACAA GCGC GCCA GCGC CGATTCGCGGACCAT TERM 6050 4629551 - 4629563 + G 100 -9.1 -5.03314 | opp_overlap 4629550 4629549 CAACTGGCAAGAACG GCGCT GGC AGCGC TTTTTTAACCATGAA SeD_A4770 4629156 - 4629815 + | putative cytoplasmic protein SeD_A4771 4629833 - 4630231 + | inner membrane protein YjfL SeD_A4772 4630241 - 4630879 + | putative inner membrane protein SeD_A4773 4630882 - 4632045 + | glutathionylspermidine synthase domain protein TERM 6051 4632474 - 4632488 + G 72 -3.5 -4.68724 | gap 1, opp_overlap 4632458, overlap 4632474 4632473 GGCGGGAAGTTTTGT CGC-CC GGGC GGCGCG TTTTGTATTACATGC TERM 6052 4633058 - 4633068 + G 70 -6.8 -4.18762 | overlap 4633063 GGAGTCATGGCTTAA TGCG GCG CGCA TTTTCAGTCGCGATT SeD_A4774 4632130 - 4633752 + | protein AidB SeD_A4775 4634105 - 4633830 - | protein YjfN SeD_A4776 4634538 - 4634236 - | hypothetical protein TERM 6053 4635458 - 4635477 + G 71 -4.2 -4.56775 | opp_overlap 4635458 GCATTACGCCAGAAG CGTTGTCG GCGA CGGTAGCG TTTTTCCGACAGCAT SeD_A4777 4634749 - 4635498 + | esterase YjfP SeD_A4778 4636250 - 4635495 - | HTH-type transcriptional regulator UlaR TERM 6054 4636082 - 4636097 + g 85 -4.6 -5.22039 | overlap 4636083 GTTGGGTAATGGCCT CTGCGC CGTT GCGCAC TTTTTTAAGTTTCCC TERM 6055 4636344 - 4636327 - R 100 -12.7 -5.22943 | opp_overlap 4636327 AGTAAATGGAAAAAA TGCCGGG TAAT CCCGGCA TGATATCGACTCACA TERM 6056 4636327 - 4636344 + r 78 -12.7 -2.63596 | opp_overlap 4636327 AGTAAATGGAAAAAA TGCCGGG TAAT CCCGGCA TGATATCGACTCACA SeD_A4779 4637419 - 4636355 - | Zn-dependent hydrolase of the beta-lactamase fold TERM 6057 4637570 - 4637595 + H 74 -5.5 -4.67123 | opp_overlap 4637538 TAATCTTTTCTGGCG TCATGGGGATG TATT CATCTTTATGA TTTTACTTATTTTAA TERM 6058 4638363 - 4638331 - g 71 -10.7 -3.1876 | AAGCCGACTCAGGAA GTGACCGATGG CTGTGGTTTCT CCATCGGTCAC CAGCAGCAGTTTGCT ulaA 4637782 - 4639179 + | ascorbate-specific permease IIC component ulaC 4639510 - 4639974 + | ascorbate-specific phosphotransferase enzyme IIA component SeD_A4783 4639988 - 4640638 + | orotidine 5'-phosphate decarboxylase / HUMPS family protein TERM 6059 4640707 - 4640687 - g 90 -8.2 -4.7497 | GGCATCTATGAAAAA GCGCTCCC TGCCG GGGAGTGC TGGCTGGAGCGCCTG ulaE 4640648 - 4641502 + | L-ribulose-5-phosphate 3-epimerase ulaF 4641502 - 4642188 + | L-ribulose-5-phosphate 4-epimerase TERM 6060 4642281 - 4642264 - T 100 -12.7 -5.40072 | opp_overlap 4642279 TTTCCGCGAAAAAAA GCCCCCT GTTC AGGGGGC AAATCAACTATGATT SeD_A4786 4642595 - 4642317 - | protein YjfY rpsF 4643062 - 4643457 + | ribosomal protein S6 priB 4643464 - 4643778 + | primosomal replication protein N rpsR 4643783 - 4644010 + | ribosomal protein S18 rplI 4644052 - 4644501 + | ribosomal protein L9 TERM 6061 4644527 - 4644557 + F 100 -11.9 -5.0133 | opp_overlap 4644528 4644533, overlap 4644528 TCGTTTTTGCTAGCA ACGAAACGTCGGC CCAGC GCCGACGTTTTGC TTTTTTAACCCCATC TERM 6062 4644556 - 4644528 - f 83 -13.2 -3.14132 | opp_overlap 4644527 4644528, overlap 4644533 CGTTTTTGCTAGCAA CGAAACGTCGGC CCAGC GCCGACGTTTTG CTTTTTTAACCCCAT TERM 6063 4644528 - 4644556 + F 100 -15.4 -3.60316 | opp_overlap 4644528 4644533, overlap 4644527 CGTTTTTGCTAGCAA CGAAACGTCGGC CCAGC GCCGACGTTTTG CTTTTTTAACCCCAT TERM 6064 4644551 - 4644533 - f 95 -11.7 -3.95584 | opp_overlap 4644528 4644527, overlap 4644528 TTGCTAGCAACGAAA CGTCGGC CCAGC GCCGACG TTTTGCTTTTTTAAC TERM 6065 4644632 - 4644618 - f 70 -2.2 -4.93365 | CGCGATAATCAAAAA TAAAAC ATT ATTTTA ATTTCTTGGTGAAAG TERM 6066 4644701 - 4644711 + G 70 -3.2 -4.80178 | AAAACGTCGTTTATG TGTG TGC CGCA TTTTGTTGCTTGCTA SeD_A4791 4644649 - 4645575 + | exported membrane protein TERM 6067 4645584 - 4645563 - T 79 -10.2 -3.61398 | TTGGTGGGTGAATAA GGTGAAGC GGTAAT GCTTCACC TGAACGAATAGGGTA SeD_A4792 4646260 - 4645625 - | opacity-associated protein A TERM 6068 4646424 - 4646451 + H 79 -4 -5.21709 | gap 1, opp_overlap 4646427, overlap 4646427 AAAGTTTTACCAGAA GAAGCGTGGCTGT TAT GCTGCC-CGCTAC TTTTTTGATATCCGA SeD_A4793 4646438 - 4647100 + | fkbp-type 22 kda peptidyl-prolyl cis-trans isomerase TERM 6069 4647109 - 4647149 + F 95 -17 -2.52676 | gap 1, overlap 4647124 TCTGTAAGCGCCCCG GGTTTGCCGGATGATGGCG TAAA CGCC-TTATCCGGCAACCC TGACTTCAGCAGATG TERM 6070 4647425 - 4647414 - g 71 -5.8 -4.22652 | GTAGATCAGGTAAAA GTCG CAGC CGAC GAACAGGCTCCGGCT TERM 6071 4648140 - 4648125 - g 73 -5.4 -4.62904 | gap 1, opp_overlap 4648125 AAAGATCCGGAAAAA TCGCTGC CGC GC-GCGA TTAACTCAATACCGA SeD_A4794 4647396 - 4648799 + | proline-specific permease ProY TERM 6072 4650239 - 4650213 - g 71 -10.8 -3.16071 | overlap 4650211 4650209 CCCGATATTAACAGA GTGGACGACGGT ATC ACCAGCGCCCAC TGACGTTATCTCTTT SeD_A4795 4649137 - 4650276 + | hypothetical protein TERM 6073 4650682 - 4650659 - g 73 -6 -4.46581 | GAAAATCGTACAAAA TCCACCGG GTAAGCCG CCAGTGGA TGCAGCGACTTTTCG TERM 6074 4651006 - 4651017 + G 78 -2.2 -5.15167 | gap 1, overlap 4651006 ACACTATTCTACGTA CC-GC CAC GCAGG TTTTTGTTAATGGTG SeD_A4796 4650291 - 4651679 + | hypothetical protein TERM 6075 4651734 - 4651701 - T 73 -9.8 -3.36327 | opp_overlap 4651705, overlap 4651705 TTAGTCGATTCAGAA TAAACGATCCTG TCTATACGTT CAGGATCGTTTA TTGGCGGTGGATTAT TERM 6076 4651730 - 4651705 - T 72 -6.2 -4.33417 | opp_overlap 4651705, overlap 4651701 TCGATTCAGAATAAA CGATCCTG TCTATACGTT CAGGATCG TTTATTGGCGGTGGA SeD_A4797 4652408 - 4651746 - | regulator of cell morphogenesis and NO signaling TERM 6077 4651995 - 4652009 + g 74 -8.6 -4.03811 | overlap 4651986 CTGTTTGATCATGGG GAACAG GAT CTGTTC TTCTTTCATCATATG TERM 6078 4652271 - 4652304 + g 70 -8.7 -3.63744 | overlap 4652270 AATGATGTCAATATC GACGTCGTGACGCGC GGCG GCGCGTGCCAGCGTC TGTTTTCCACCGCAG TERM 6079 4652521 - 4652540 + r 80 -7.1 -4.70879 | opp_overlap 4652514, overlap 4652525 TGAAATTAGCGTTCC GTGACCG GAACGA CGGTCGC TTTTTCCGGTTTCGC SeD_A4798 4653476 - 4652511 - | inner membrane protein YtfF SeD_A4799 4654405 - 4653557 - | hypothetical protein TERM 6080 4654266 - 4654294 + g 77 -3.6 -5.09426 | overlap 4654267 4654272 TCCGCCTGGCGAACG GCGATCCCGCGC TGACT GAGCGGGGCGGC TTTTTTCGGGTTACG TERM 6081 4654923 - 4654870 - R 100 -19.3 -2.78816 | gap 3 GGAGCGTTTATCAGA TGGCGGCTAGCGCTTTATTCGGCCTG CCAGT CAGGCCGAATAAA-CGC-AGC-GCCA TACGGGACTCACGTT cpdB 4656880 - 4654937 - | 2',3'-cyclic-nucleotide 2'-phosphodiesterase cysQ 4657148 - 4657888 + | 3'(2'),5'-bisphosphate nucleotidase SeD_A4803 4658435 - 4657878 - | hypothetical protein SeD_A4804 4658762 - 4658968 + | hypothetical protein TERM 6082 4659003 - 4659035 + T 77 -9.1 -3.85698 | opp_overlap 4659009, overlap 4659005 4659009 GGTTAAAAAAGTAAA AAAAAACGGCTCCTG AAT CAGGAGCCGTTGATG TTTCTGGCAAACGGA TERM 6083 4659005 - 4659033 + T 86 -11.7 -3.51934 | opp_overlap 4659009, overlap 4659003 4659009 TTAAAAAAGTAAAAA AAAACGGCTCCTG AAT CAGGAGCCGTTGA TGTTTCTGGCAAACG TERM 6084 4659029 - 4659009 - T 100 -16.9 -6.31682 | opp_overlap 4659005 4659003 4659009 AAAAGTAAAAAAAAA CGGCTCCTG AAT CAGGAGCCG TTGATGTTTCTGGCA TERM 6085 4659009 - 4659029 + T 100 -16.9 -3.50335 | opp_overlap 4659009, overlap 4659005 4659003 AAAAGTAAAAAAAAA CGGCTCCTG AAT CAGGAGCCG TTGATGTTTCTGGCA SeD_A4805 4660396 - 4659053 - | putative transporter TERM 6086 4659097 - 4659111 + g 70 -3.4 -4.77165 | overlap 4659080 CATCGGGCAGTTTCG GCGCCG GTA CGTTGC TTTTATTGTCGAGAC TERM 6087 4660489 - 4660468 - R 70 -5.1 -4.41895 | opp_overlap 4660468, overlap 4660469 AACGTTTAATGAAAA CCGGCTC GTAGCAGT GAGCCGA TAAGTTCAGGGCTAG msrA 4661217 - 4660579 - | peptide-methionine (S)-S-oxide reductase TERM 6088 4661175 - 4661196 + g 90 -5.9 -5.26316 | opp_overlap 4661177, overlap 4661160 4661166 TGCGTCCTGGTAACG CATCTGCTT GAGT AACCAGATG TTTTTTATCAAATAA SeD_A4807 4661272 - 4661388 + | hypothetical protein SeD_A4808 4661430 - 4663163 + | outer membrane protein, OMP85 family TERM 6089 4663694 - 4663660 - g 77 -4.8 -4.91511 | opp_overlap 4663664 4663665, overlap 4663661 ATGGCAGGAGAAAAA CCTGACCCTGAAACCG ACG CGGCTTCAGGGATTGC TGATCGCGCTGCCGA TERM 6090 4663664 - 4663690 + G 71 -10.8 -3.21416 | opp_overlap 4663661 4663660, overlap 4663665 CAGGAGAAAAACCTG ACCCTGAAACCG ACG CGGCTTCAGGGA TTGCTGATCGCGCTG TERM 6091 4663665 - 4663689 + G 81 -14.3 -2.52635 | opp_overlap 4663661 4663660, overlap 4663664 AGGAGAAAAACCTGA CCCTGAAACCG ACG CGGCTTCAGGG ATTGCTGATCGCGCT SeD_A4809 4663160 - 4666939 + | hypothetical protein SeD_A4810 4666942 - 4667286 + | hypothetical protein TERM 6092 4667314 - 4667293 - T 71 -10.1 -3.17392 | opp_overlap 4667293 4667295, overlap 4667295 CAGCCCTGAACTGAA CACGCCACC CTCG GGTGGCGTT GTTTTTTACATTCTG TERM 6093 4667293 - 4667315 + T 100 -9.9 -5.1925 | gap 1, opp_overlap 4667293 4667295, overlap 4667295 CAGCCCTGAACTGAA CA-CGCCACC CTCG GGTGGCGTTG TTTTTTACATTCTGG TERM 6094 4667312 - 4667295 - T 81 -12.7 -3.14878 | opp_overlap 4667293 4667295, overlap 4667293 GCCCTGAACTGAACA CGCCACC CTCG GGTGGCG TTGTTTTTTACATTC TERM 6095 4667295 - 4667312 + T 100 -12.7 -4.67173 | opp_overlap 4667295 4667293, overlap 4667293 GCCCTGAACTGAACA CGCCACC CTCG GGTGGCG TTGTTTTTTACATTC SeD_A4811 4668548 - 4667340 - | putative sugar transporter TERM 6096 4667482 - 4667461 - G 71 -4.3 -4.56597 | overlap 4667463 GTTGTCCGGTAAAAA TAGCCGACC ATTA GGCCTGCCA GCGTACCGCCGCCGC TERM 6097 4668184 - 4668174 - G 70 -6.8 -4.07568 | TTCTTTGTCTGAAAA CCAG TCG CTGG CGAAGCGGGACTGCT TERM 6098 4668299 - 4668284 - G 85 -6.8 -4.89393 | overlap 4668285 TAAATCCGACAAAAA CGGTCG CAAT CGACCA GATTAGCACCATCAG SeD_A4812 4669708 - 4668545 - | dihydroorotase TERM 6099 4670088 - 4670067 - R 100 -10.9 -5.11063 | opp_overlap 4670067 ATTAGCCAATAAAAA GGCCCTCAT TACT ATGAGAGCC TTTATCTTGACGCTT TERM 6100 4670067 - 4670088 + r 79 -8.7 -4.20025 | opp_overlap 4670067 ATTAGCCAATAAAAA GGCCCTCAT TACT ATGAGAGCC TTTATCTTGACGCTT ppa 4670648 - 4670118 - | inorganic diphosphatase TERM 6101 4670845 - 4670810 - R 83 -13.3 -3.23274 | opp_overlap 4670811, overlap 4670805 GGCCTGATAAGGCAA CGCCGCCATCGGACA TGTTAT TGCCCAATGGCGGCT TCATGCGTTAGTCCG TERM 6102 4670811 - 4670844 + r 81 -12.4 -3.22884 | opp_overlap 4670810 4670805 GCCTGATAAGGCAAC GCCGCCATCGGACA TGTTAT TGCCCAATGGCGGC TTCATGCGTTAGTCC fbp 4671873 - 4670875 - | fructose-1,6-bisphosphatase TERM 6103 4671773 - 4671783 + g 73 -5.4 -4.63218 | TCGCGGTGGATGATC TTGG CGC CCAA TTTTATTGCCGACAG TERM 6104 4672493 - 4672506 + G 100 -8.1 -5.55769 | overlap 4672479 AGGTTTCCGCGCGCC TGGGC GAGA GCCCA TTTTTTGTTATCGAA mpl 4672048 - 4673421 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 6105 4673453 - 4673426 - T 91 -7.6 -5.14563 | gap 1, overlap 4673427 TTGTGGAGTAAAAAA TGCCCGGT-GGCG CTG CGCTTACCGGGCC TACAATACGTACATT TERM 6106 4673452 - 4673427 - T 86 -11.1 -3.68256 | gap 1, overlap 4673426 TGTGGAGTAAAAAAT GCCCGGT-GGCG CTG CGCTTACCGGGC CTACAATACGTACAT yjgA 4674079 - 4673528 - | YjgA protein pmbA 4674187 - 4675527 + | protein PmbA TERM 6107 4675540 - 4675576 + F 72 -9.4 -3.65201 | gap 1, opp_overlap 4675530 TAATACCCGTCATAC TTCAGGCTGCAGGC-GC GTTG GCTGCCTGCGACCCGAA TTATTCAGGGTATTA TERM 6108 4675804 - 4675789 - g 73 -6 -4.45544 | overlap 4675773 4675790 CGGCATTAACCAAAA TGCGCG CGGC CGCGCT GGATGCTCAAAAAGC SeD_A4819 4675626 - 4676012 + | soluBle cytochrome b562 TERM 6109 4676014 - 4676063 + F 74 -10.9 -2.79183 | gap 1 AGAAGTATCGTTAAT TTTTGTGGGATGGCGGCTT-CG CTTTATC CGTAGGTCGCCATCCGGCAAAA TGTAATACCCATCAC SeD_A4820 4676299 - 4676628 + | PRD domain protein SeD_A4821 4676639 - 4677001 + | transcriptional regulator TERM 6110 4677072 - 4677040 - g 81 -8.4 -4.3467 | gap 1 ACGGTGAGAGTAAAA GGCAAGGGCG-ACGC CAAA GCACGCGCCTTTGCC GATGCGCTGAACCAT SeD_A4822 4677001 - 4677303 + | putative cytoplasmic protein TERM 6111 4677290 - 4677303 + F 72 -3.1 -5.06414 | gap 1 ACAGGGTGGATTTCG TC-GCG AAA CGCTGA TTTTTATTAAAAAGG TERM 6112 4677969 - 4677983 + G 75 -6.4 -4.5394 | opp_overlap 4677969, overlap 4677970 ATGTCACCAAAGTGA TGATGG TCG CCATCG TTTTGCTGTTTGTGT SeD_A4823 4677326 - 4678102 + | membrane protein TERM 6113 4678291 - 4678314 + G 100 -9.4 -5.27335 | overlap 4678287 ACCGGCGTCTACGGC GCGGTCGCCG CTTT CGGCGCCAGC TTTTTATTTGCCCGC TERM 6114 4678413 - 4678425 + G 70 -6.9 -4.19624 | GGTTCCGGCGTTATT GCTGG GAG CCGGC TTTGTCTTCCCGGTG SeD_A4824 4678114 - 4678758 + | membrane protein TERM 6115 4679356 - 4679344 - g 93 -9.1 -4.72497 | CATGCAGCAAGAAAA CGGCA ACC TGCCG CTGATGGTACATATT SeD_A4825 4678817 - 4679950 + | putative amidohydrolase SeD_A4826 4679934 - 4681052 + | hypothetical protein SeD_A4827 4681049 - 4681789 + | 4-hydroxy-2-oxoglutarate aldolase TERM 6116 4682082 - 4682043 - g 83 -12.8 -3.25088 | gap 1, opp_overlap 4682067, overlap 4682035 4682044 CTGCAAACGCAGCAA TCTCCCGCCCTGGCGCGCG GTC CGCGCACCAGC-CAGGAGC GGATACACTATTTGC TERM 6117 4682081 - 4682044 - g 89 -16.3 -2.54732 | gap 1, opp_overlap 4682067, overlap 4682043 4682035 TGCAAACGCAGCAAT CTCCCGCCCTGGCGCGCG GTC CGCGCACCAGC-CAGGAG CGGATACACTATTTG TERM 6118 4682067 - 4682104 + G 84 -6.1 -5.0538 | opp_overlap 4682044 4682043 4682035 CTGGCGCGCGGTCCG CGCACCAGCCAGGAGCG GATA CACTATTTGCTGGCGCG TTTTTTAACCTCCGC SeD_A4828 4681806 - 4683719 + | HTH domain protein TERM 6119 4683957 - 4683939 - g 74 -7.4 -4.1899 | opp_overlap 4683932 GCATGCCAGTGAAAA CCGTCACT CTT AGCGACAG TGAAGATGCACTGAT SeD_A4829 4683797 - 4684039 + | hypothetical protein SeD_A4830 4684029 - 4684313 + | putative stability protein StbE nrdG 4684781 - 4684317 - | anaerobic ribonucleoside-triphosphate reductase activating protein nrdD 4687136 - 4684998 - | anaerobic ribonucleoside-triphosphate reductase TERM 6120 4685128 - 4685095 - G 76 -10.1 -3.90744 | opp_overlap 4685100 4685105 4685106, overlap 4685071 GGGCTGCCTAAATAA CCGCACACGCGGCGG GTGA CCGAGACGCGCGCGG CGTCGTGGTTGCCGC SeD_A4833 4687341 - 4687511 + | hypothetical protein treC 4689197 - 4687545 - | alpha,alpha-phosphotrehalase TERM 6121 4689066 - 4689039 - G 87 -8.5 -4.60797 | gap 2 CGGCGAGATATAAAA CGGCGT-GA-GCC AGAT GGCGTCCACGCCG AGTCGCTGTAGATAG treB 4690665 - 4689247 - | PTS system, trehalose-specific IIBC component TERM 6122 4690107 - 4690121 + g 95 -5.6 -5.40072 | opp_overlap 4690100 4690080 4690107, overlap 4690109 GCACGATACCAAGAA TCGGCG TGC CGCCCA TTTTTTTCACCGCCG TERM 6123 4690183 - 4690168 - G 80 -4.7 -5.03994 | CGGCAGATAGAAAAA GATCG CTTCGC CGATC AACCATAAAAAATCA TERM 6124 4690632 - 4690647 + g 75 -6.8 -4.39375 | opp_overlap 4690632, overlap 4690630 CGACCAGGTCAATCA GCCGGT CGAT ATCGGC TTGTTTTACTTTGCT TERM 6125 4690844 - 4690823 - R 73 -9.5 -3.45118 | gap 1, opp_overlap 4690832, overlap 4690826 CGAGGGTAGAAGGAA TGACGATCCG GCG CGGATCG-CA GCGGCCATTGATCTG TERM 6126 4690842 - 4690826 - R 79 -12.3 -2.87274 | opp_overlap 4690832, overlap 4690823 GGGTAGAAGGAATGA CGATCCG GCG CGGATCG CAGCGGCCATTGATC treR 4691750 - 4690803 - | trehalose operon repressor TERM 6127 4691802 - 4691789 - H 76 -5.3 -4.84359 | TGATGGTGATAAAAA GAGTA ACTT TACTC AAGCGAAGGGCAATG TERM 6128 4691987 - 4692016 + H 77 -12.1 -2.87564 | overlap 4691989 GAGAATTTTCCTTTT CCGGTAAGCCTGC CTCT GCTGTCTTACCGG TGTGTAAGACAGTGA TERM 6129 4692076 - 4692062 - g 71 -4.2 -4.65895 | opp_overlap 4692065 4692066, overlap 4692064 GTTTTTATTTAAAAA TTGCTC ATC GGGCAA GGCTTTGCCGCGCCT TERM 6130 4693945 - 4693984 + G 71 -9.8 -3.59262 | opp_overlap 4693948, overlap 4693948 TATTGAAGGGTTAAG CGACGACGCGTTGGCGGC GCTG GCCGCCCGTACGACGTTG TTTGCGCGTCTGACG TERM 6131 4693948 - 4693981 + G 71 -7.9 -3.93256 | opp_overlap 4693948, overlap 4693945 TGAAGGGTTAAGCGA CGACGCGTTGGCGGC GCTG GCCGCCCGTACGACG TTGTTTGCGCGTCTG mgtA 4692062 - 4694842 + | magnesium-translocating P-type ATPase SeD_A4839 4695404 - 4694958 - | putative transposase SeD_A4840 4695865 - 4695479 - | putative endoribonuclease L-PSP pyrI 4696403 - 4695942 - | aspartate carbamoyltransferase, regulatory subunit pyrB 4697351 - 4696416 - | aspartate carbamoyltransferase, catalytic subunit TERM 6132 4696475 - 4696510 + g 73 -6 -4.38712 | overlap 4696460 GGCGAGCGAAAATAC CGTTGCCCGCCTGTTG GAAG TACCAGGCGTGTGGCG TTTTATCCACATCCG TERM 6133 4697399 - 4697382 - R 100 -12.7 -5.75342 | opp_overlap 4697372 4697382 CCTGGGCAAAAAAAA GCCCCTC AATT GAGGGGC TTGGTATTGGTTTTC TERM 6134 4697382 - 4697399 + r 85 -12.7 -3.4594 | opp_overlap 4697382, overlap 4697372 CCTGGGCAAAAAAAA GCCCCTC AATT GAGGGGC TTGGTATTGGTTTTC SeD_A4844 4698067 - 4697579 - | arginine repressor, ArgR SeD_A4845 4698180 - 4698064 - | hypothetical protein TERM 6135 4698196 - 4698250 + r 79 -12.2 -2.76263 | gap 1, opp_overlap 4698233, overlap 4698194 AAAAGGTGACGGCGT GCCTGATGGCGCTGTG-CTTATCAG TCCTGT CGGATAAGACGCGTCGCCATCTGGC TCGTTACATCATCGC SeD_A4846 4699657 - 4698254 - | C4-dicarboxylate anaerobic carrier TERM 6136 4699543 - 4699557 + g 70 -7.1 -4.07678 | CCTCTTTTCCCAGCG TGGCG TTCAT CGCCA TTTGGTATTTTCCCG TERM 6137 4699673 - 4699712 + r 81 -12.3 -3.14211 | gap 1, opp_overlap 4699678 GATGTTCTCTCCTGA TATCAC-GGATATGCGCC GCGAG GGCGCATATCCTGTGGGA TTAGTCGCCGAGCGT TERM 6138 4699706 - 4699678 - R 81 -13.2 -2.62184 | opp_overlap 4699673 TCTCTCCTGATATCA CGGATATGCGCC GCGAG GGCGCATATCCT GTGGGATTAGTCGCC argF 4700717 - 4699713 - | ornithine carbamoyltransferase TERM 6139 4700221 - 4700242 + g 75 -13 -2.52464 | CCCATGTTGTTGCGC GCGTCGCC CAGGTA GGCGACGC TCAGTTCCGGCAGCG SeD_A4848 4700854 - 4700717 - | hypothetical protein TERM 6140 4700813 - 4700801 - GR 79 -10.5 -3.63515 | CTGTAGGCCGAATAA GGCGG AAG CCGCC ATCCGGTAAAAAGCC arcC 4701761 - 4700829 - | carbamate kinase TERM 6141 4701554 - 4701567 + gr 74 -6.7 -4.36914 | GGTAGGGTGTAACGT TAGCG TAGG CGCTA TTTTGTAGCGCCAGC arcA 4702992 - 4701772 - | arginine deiminase SeD_A4851 4703093 - 4703284 + | hypothetical protein TERM 6142 4703653 - 4703639 - f 82 -5.8 -5.24799 | GTATAAAGAGAAAAA TAAAAC GCT GTTTTA ACTAAGGGGATGCGA TERM 6143 4704017 - 4703999 - g 70 -5.2 -4.46212 | opp_overlap 4704001, overlap 4704001 GCGTCGACGAGAAAA CCGTCGTC CTG AACGAAGG CGACTTTGTGGTGCT SeD_A4852 4703668 - 4704120 + | putative cytoplasmic protein argF 4705198 - 4704194 - | ornithine carbamoyltransferase SeD_A4854 4705364 - 4705780 + | hypothetical protein TERM 6144 4705799 - 4705820 + G 100 -10.9 -5.41746 | opp_overlap 4705793, overlap 4705794 TGCATAGTATGACGG TACGGCAGC GTCT GCTGTCGTA TTTTTTTAACAGGTT TERM 6145 4706033 - 4706023 - g 70 -6.8 -4.1552 | overlap 4706024 TATGTCGCCAATAAA TCGG GCG CCGA CGCGCTGCTCGCCTG SeD_A4855 4705792 - 4706604 + | tRNA-(ms[2]io[6]A)-hydroxylase TERM 6146 4706746 - 4706729 - T 93 -12.7 -3.72576 | TCTGTCCTGAGTAAA GCCTGCC CTGA GGCAGGC AAAAAGAACTCACTC SeD_A4857 4707326 - 4706838 - | hypothetical protein TERM 6147 4707354 - 4707379 + r 82 -11.3 -3.49618 | gap 1, opp_overlap 4707349 4707346 TGAATAATAAGTGAT TCCCGGATAACA GGA TGTT-TCCGGGA TTACTTATATCAGCA SeD_A4858 4707936 - 4707433 - | acetyltransferase, gnat family TERM 6148 4707712 - 4707700 - G 74 -10.5 -3.46602 | TTCGCTACAGGATAA CGGCG CCA CGCCG CCGCCGCCCACCACA TERM 6149 4708068 - 4708085 + r 84 -4.9 -5.3321 | opp_overlap 4708068 4708069 4708071, overlap 4708069 AGTATCGTAGTCAAA TCAGTAA CAAT TTACTGG TTTTTATTATTAATT TERM 6150 4709345 - 4709326 - R 100 -15 -4.66609 | opp_overlap 4709324 TATCTGATGTAAAAA GGCCGACG TTTA CGTCGGCC CATAATTCATGTTGT valS 4712314 - 4709459 - | valyl-tRNA synthetase TERM 6151 4709714 - 4709731 + g 71 -7.7 -3.9712 | gap 1 GCCGTCGATGATTTT GGTCACGG AAA CCG-GACC TTTGTCATCGGCTGG TERM 6152 4710819 - 4710839 + g 74 -7.5 -4.07568 | opp_overlap 4710799, overlap 4710821 ACGCTGGTCGGGTGG AACTGACGC AGC GCGTCGGTG TTTTCCGGCCAGCCG TERM 6153 4710821 - 4710837 + g 74 -10.1 -3.63744 | opp_overlap 4710799, overlap 4710819 GCTGGTCGGGTGGAA CTGACGC AGC GCGTCGG TGTTTTCCGGCCAGC TERM 6154 4712083 - 4712099 + g 71 -4.3 -4.62783 | overlap 4712086 CGGCGTGGTCGGTGC CGACCTG CCA CAGGGTG TTTTTACCCTGCATA holC 4712796 - 4712314 - | DNA polymerase III, chi subunit TERM 6155 4712852 - 4712841 - R 71 -7.2 -4.09685 | overlap 4712821 4712842 CGCCATCCGGCAAAA CGCC TGAT GGCG GCGCTAATGCGCCTT TERM 6156 4712852 - 4712865 + r 73 -9.5 -3.30124 | opp_overlap 4712821 4712842 AAAACGCCTGATGGC GGCGC TAAT GCGCC TTATCAGGCCTACGG pepA 4714405 - 4712894 - | leucyl aminopeptidase SeD_A4864 4714800 - 4715900 + | putative permease TERM 6157 4716076 - 4716023 - g 95 -8.2 -5.06451 | gap 3, opp_overlap 4716041 GATCAGCTGAAAAAA GCGGGGCAGGGTA-AC-TACGACGCGC TGG GCGCGG-GTATGTACACCCTGCTCAGC GTACCTAAGGATATC TERM 6158 4716917 - 4716939 + G 81 -8.4 -4.29227 | ATTCCGCCGATTGTC GGCGCGCT GCTGCCG AGCGCGTC TTTCTTCCTGATTAG SeD_A4865 4715900 - 4716982 + | inner membrane protein YjgQ TERM 6159 4717033 - 4716988 - T 79 -12.7 -2.91199 | gap 1, opp_overlap 4716993 4717011 4717014, overlap 4716992 TAAGTCGTAATCACA GTAATCGTAGGCCTGAT-GGCG CTG CGCTTATCAGGCCTACCATGAC CCGTAGGCCTGATAA TERM 6160 4717029 - 4716992 - T 82 -12.1 -3.32647 | gap 1, opp_overlap 4716993 4717011 4717014, overlap 4716988 TCGTAATCACAGTAA TCGTAGGCCTGAT-GGCG CTG CGCTTATCAGGCCTACCA TGACCCGTAGGCCTG TERM 6161 4717011 - 4717052 + T 93 -13.9 -3.53444 | opp_overlap 4716992 4716988, overlap 4716993 4717014 AGGCCTGATGGCGCT GCGCTTATCAGGCCTAC CATGACCC GTAGGCCTGATAAGTCC TTTCCGCCGCCATCC TERM 6162 4717014 - 4717049 + T 100 -16.4 -2.90496 | opp_overlap 4716992 4716988, overlap 4717011 CCTGATGGCGCTGCG CTTATCAGGCCTAC CATGACCC GTAGGCCTGATAAG TCCTTTCCGCCGCCA TERM 6163 4717199 - 4717176 - T 73 -2.5 -5.2422 | opp_overlap 4717176 AAGTAGATCAAAAAA TTTATAACG TGCTGC CGTGATAAA TCTGATAGCCCAAAT SeD_A4866 4718175 - 4717177 - | HTH-type transcriptional regulator IdnR TERM 6164 4717631 - 4717641 + g 71 -8.2 -3.87075 | AGATAGAGGATTTTT CGCC GCT GGCG TTTATCCAGCATGGT TERM 6165 4718062 - 4718082 + g 80 -4.6 -5.00616 | overlap 4718063 GATCTGCGCAATACG CTCGCCGG TTTCC CTGGCGAC TTTTTTCGGCGAGCG TERM 6166 4718102 - 4718117 + g 70 -3.2 -4.82901 | overlap 4718089 TTCGGCGAGCGGATG TAACGG CTCA CCGTCA TTTTTGTCACGCCAG SeD_A4867 4719630 - 4718239 - | transporter, gluconate:H+ symporter (GntP) family TERM 6167 4718440 - 4718428 - G 71 -10.5 -3.23216 | opp_overlap 4718428 4718424 4718439 CGCCAGTACCATTAA CGCCG GAT CGGCG TGGGTTACGTTAATA TERM 6168 4719604 - 4719587 - G 86 -12.7 -3.6581 | opp_overlap 4719586 4719595, overlap 4719585 ATTAGCGCCAAAATA GCAGCGC TTAC GCGCTGC GTCGTATTTCCCTGG SeD_A4868 4720384 - 4719620 - | gluconate 5-dehydrogenase TERM 6169 4720092 - 4720106 + g 76 -9.2 -4.06419 | overlap 4720097 GTAAACGGATGACGG CGCTGG ATA CCGGCG TTATTTATCAGGACG TERM 6170 4720097 - 4720138 + g 86 -7.4 -4.74453 | overlap 4720092 CGGATGACGGCGCTG GATACCGGCGTTATTTAT CAGGAC GTCAATGACGCCGATATC TTTTTCGATATGTTC SeD_A4869 4721440 - 4720409 - | L-idonate 5-dehydrogenase aroK 4721657 - 4722187 + | shikimate kinase SeD_A4871 4723234 - 4722215 - | hypothetical protein TERM 6171 4723189 - 4723218 + g 90 -5 -5.22006 | gap 1, overlap 4723192 ATTCATAGAGTTCGA GTT-CGCCGCC CGCCTCTTT GGCGGCGTAGC TTTTTATTATCGTCA TERM 6172 4723556 - 4723571 + H 100 -9 -5.4251 | opp_overlap 4723555 4723558 AAAAGCATGTAAATG GACCTC AGCT GAGGTC TTTTTTATGTCTGAA SeD_A4874 4724613 - 4724861 + | transcriptional regulator, CopG family SeD_A4875 4724970 - 4725209 + | hypothetical protein SeD_A4876 4725212 - 4725520 + | cytotoxic protein CcdB TERM 6173 4726678 - 4726712 + T 77 -3.4 -5.1523 | gap 1 CCGTGAAGCTTTCGC CCGCAGC-ACCTGCC GGCGCA GGCTGGCCGCTACGG TTTTTATGTTATACA TERM 6174 4727518 - 4727567 + T 93 -9.6 -4.66264 | gap 1, opp_overlap 4727526, overlap 4727523 4727524 4727526 ATTTTTAAAATGGCG TGAGTATATTAGCATCCGCACAG ATAAA TTGTGCGGATGCTAATA-GTTGA TTTTTGGAGATTTTG TERM 6175 4727523 - 4727563 + T 100 -16.4 -3.81256 | opp_overlap 4727526, overlap 4727518 4727524 4727526 TAAAATGGCGTGAGT ATATTAGCATCCGCACAG ATAAA TTGTGCGGATGCTAATAG TTGATTTTTGGAGAT TERM 6176 4727524 - 4727562 + T 100 -19.9 -2.88031 | opp_overlap 4727526, overlap 4727523 4727518 4727526 AAAATGGCGTGAGTA TATTAGCATCCGCACAG ATAAA TTGTGCGGATGCTAATA GTTGATTTTTGGAGA TERM 6177 4727526 - 4727560 + T 100 -18.1 -2.9838 | opp_overlap 4727526, overlap 4727524 4727523 4727518 AATGGCGTGAGTATA TTAGCATCCGCACAG ATAAA TTGTGCGGATGCTAA TAGTTGATTTTTGGA TERM 6178 4727560 - 4727526 - T 100 -17.4 -2.78715 | opp_overlap 4727526 4727524 4727523 4727518 AATGGCGTGAGTATA TTAGCATCCGCACA GATAAAT TGTGCGGATGCTAA TAGTTGATTTTTGGA SeD_A4879 4727632 - 4727507 - | hypothetical protein SeD_A4880 4727864 - 4727998 + | hypothetical protein TERM 6179 4728092 - 4728137 + F 73 -7.9 -4.18908 | gap 1, opp_overlap 4728085 4728105, overlap 4728085 4728097 4728105 4728128 AAAACTAATTTAATT TAAACTT-TATAAATGCCCTCA ATA TGAGGGCATTTGGATAATTTTA TTATTTTAAAAATAT TERM 6180 4728097 - 4728132 + F 91 -7.8 -5.093 | gap 1, opp_overlap 4728105, overlap 4728092 4728105 4728128 TAATTTAATTTAAAC TT-TATAAATGCCCTCA ATA TGAGGGCATTTGGATAA TTTTATTATTTTAAA TERM 6181 4728105 - 4728123 + F 95 -13.2 -3.77014 | opp_overlap 4728105, overlap 4728097 4728092 TTTAAACTTTATAAA TGCCCTCA ATA TGAGGGCA TTTGGATAATTTTAT TERM 6182 4728123 - 4728105 - f 95 -13.2 -3.95219 | opp_overlap 4728105 4728097 4728092 TTTAAACTTTATAAA TGCCCTCA ATA TGAGGGCA TTTGGATAATTTTAT TERM 6183 4728168 - 4728150 - f 82 -7.6 -4.63527 | opp_overlap 4728139 4728128 4728150 4728149 4728152 TTATTATTTTAAAAA TATCTATT TTG AATAGATA GGTTTTATGCTTCCA SeD_A4881 4728713 - 4728946 + | chaperone protein SefB SeD_A4882 4728963 - 4731407 + | outer membrane fimbrial usher protein TERM 6184 4731646 - 4731634 - f 85 -5.5 -5.27769 | opp_overlap 4731634 AGAAAAAATTAAAAA TACCC CAG GGGCA TATATTATTAGAGGT SeD_A4883 4731699 - 4731818 + | hypothetical protein TERM 6185 4731876 - 4731855 - T 77 -7.2 -4.3953 | opp_overlap 4731851, overlap 4731856 TTGAATTATAATAAA GGGTGCGC AAATTG GCGCACCT ATAACTCTTAATTAT TERM 6186 4731875 - 4731856 - T 74 -10.7 -3.22995 | opp_overlap 4731851, overlap 4731855 TGAATTATAATAAAG GGTGCGC AAATTG GCGCACC TATAACTCTTAATTA SeD_A4884 4732699 - 4731884 - | SefR SeD_A4885 4733276 - 4733485 + | hypothetical protein TERM 6187 4733613 - 4733636 + G 77 -8 -4.08767 | opp_overlap 4733613, overlap 4733596 4733615 4733617 GCTGCAGGGCTATAA CTGCGGGCAG ATTG CTGCCCTCTG TTTTCGCAGCGTCAA TERM 6188 4733615 - 4733634 + G 70 -9.2 -3.6422 | opp_overlap 4733613, overlap 4733596 4733613 4733617 TGCAGGGCTATAACT GCGGGCAG ATTG CTGCCCTC TGTTTTCGCAGCGTC TERM 6189 4733617 - 4733632 + G 73 -10.4 -3.39908 | opp_overlap 4733613, overlap 4733596 4733615 4733613 CAGGGCTATAACTGC GGGCAG ATTG CTGCCC TCTGTTTTCGCAGCG SeD_A4886 4733470 - 4733820 + | putative GerE-family regulatory protein TERM 6190 4733876 - 4733903 + G 71 -4.8 -4.61868 | overlap 4733875 TTATTACGCCTGTCT GGCCGTCGTCAT ATTA ATGGCAATGGTC TTTTGTGTGTCAGTG SeD_A4887 4733799 - 4733942 + | hypothetical protein SeD_A4888 4734065 - 4734718 + | dlt SeD_A4889 4734708 - 4734854 + | hypothetical protein SeD_A4890 4734951 - 4734835 - | hypothetical protein TERM 6191 4734976 - 4734932 - G 76 -9.4 -4.06904 | gap 2, opp_overlap 4734926, overlap 4734935 TTATGTAACCAGAAA GCAGCACTGCTGACCGCCAT TCTCCTG ATGGCGGCCGGC-GTGCT-C ACCCTGTGTTTCCCG TERM 6192 4734974 - 4734935 - G 76 -12.2 -3.0682 | gap 1, opp_overlap 4734926, overlap 4734932 TGTAACCAGAAAGCA GCACTGCTGACCGCCAT TCTCCTG ATGGCGGCCGGC-GTGC TCACCCTGTGTTTCC TERM 6193 4735092 - 4735045 - H 70 -2.5 -4.98911 | gap 1, opp_overlap 4735091, overlap 4735046 4735048 CAGCAGAAAAAGAAA TTACCGGGATACACGGC-GGCC TCTCC GGCCTGACATGGAACCCGGACA GCAGAACGCTGTTTG TERM 6194 4736188 - 4736178 - g 76 -5.4 -4.8048 | overlap 4736180 TTCTGATATTAAAAA GATC AAG GATC TTGAGGACGAGAATC SeD_A4892 4736014 - 4736292 + | transposase family protein TERM 6195 4737176 - 4737191 + T 100 -9 -5.72622 | opp_overlap 4737175 4737178 AAAAGCATATAAATG GACCTC AACT GAGGTC TTTTTTATTTCTAAA TERM 6196 4737359 - 4737328 - T 70 -10.3 -2.52795 | opp_overlap 4737320 4737332 4737334, overlap 4737332 4737334 AATGTCTTGAATGTA CATATAGTTGCGA GCATCA TCGCAACTATGTG CTCATGGATTCTTCA TERM 6197 4737355 - 4737332 - T 70 -9.7 -2.94912 | opp_overlap 4737332 4737320 4737334, overlap 4737328 4737334 TCTTGAATGTACATA TAGTTGCGA GCATCA TCGCAACTA TGTGCTCATGGATTC TERM 6198 4738453 - 4738437 - T 73 -10.9 -2.55074 | overlap 4738440 CGCAAGCGGAATTTA TAAGGCG CGG CGCCTTA AAGAGCACAGGGAGA TERM 6199 4738689 - 4738731 + T 90 -15.3 -2.74514 | opp_overlap 4738693 4738698 4738702, overlap 4738693 4738698 4738702 TTTATAACAGCTTTA TAAATTAAACAAATCTGCC ATAGA GACAGATTTGTTTAATTTA TAATTAGAGGTTTGC TERM 6200 4738727 - 4738693 - T 100 -13.9 -3.89501 | opp_overlap 4738693 4738689 4738698 4738702, overlap 4738698 4738702 TAACAGCTTTATAAA TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA TTTATAATTAGAGGT TERM 6201 4738693 - 4738727 + T 95 -11.7 -4.05714 | opp_overlap 4738693 4738698 4738702, overlap 4738689 4738698 4738702 TAACAGCTTTATAAA TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA TTTATAATTAGAGGT TERM 6202 4738698 - 4738722 + T 71 -7.2 -4.17789 | opp_overlap 4738693 4738698 4738702, overlap 4738693 4738689 4738702 GCTTTATAAATTAAA CAAATCTGCC ATAGA GACAGATTTG TTTAATTTATAATTA TERM 6203 4738722 - 4738698 - T 79 -9.4 -4.13995 | opp_overlap 4738698 4738693 4738689 4738702, overlap 4738693 4738702 GCTTTATAAATTAAA CAAATCTGCC ATAGA GACAGATTTG TTTAATTTATAATTA SeD_A4897 4739439 - 4738735 - | conserved hypothetical protein TIGR01033 TERM 6204 4739475 - 4739493 + H 73 -7.4 -4.03995 | opp_overlap 4739474 4739475, overlap 4739472 4739476 ATTATTTACATTAAT GGCAGGTT AAT AACCTGCA TGTTTTTCTGCCGCA TERM 6205 4739476 - 4739492 + H 75 -10.9 -3.01915 | opp_overlap 4739474 4739475, overlap 4739475 4739472 TTATTTACATTAATG GCAGGTT AAT AACCTGC ATGTTTTTCTGCCGC SeD_A4898 4739537 - 4739668 + | hypothetical protein TERM 6206 4739990 - 4739959 - T 82 -11 -3.6106 | gap 1, opp_overlap 4739957 4739960 4739961, overlap 4739960 TTGAATACTTTTAAA TGGAGGTATACCTCT TGT AG-GGTATACCTCCT GCTTTACGTTATCGC TERM 6207 4739960 - 4739989 + T 88 -14.5 -2.98778 | gap 1, opp_overlap 4739959 4739960, overlap 4739957 4739961 TGAATACTTTTAAAT GGAGGTATACCTCT TGT AG-GGTATACCTCC TGCTTTACGTTATCG TERM 6208 4739989 - 4739960 - T 87 -14.5 -2.76315 | gap 1, opp_overlap 4739960 4739957 4739961, overlap 4739959 TGAATACTTTTAAAT GGAGGTATACCTCT TGT AG-GGTATACCTCC TGCTTTACGTTATCG SeD_A4899 4741624 - 4739999 - | putative SAM-dependent methyltransferase TERM 6209 4741083 - 4741065 - G 71 -10.2 -3.29043 | opp_overlap 4741082, overlap 4741052 AAGCCGTGCGGACAA CGCTGCCA GCC TGGCTGCG CCATGCCCTGGCGTT TERM 6210 4741082 - 4741096 + g 70 -7.1 -4.10552 | opp_overlap 4741065 CTGCCAGCCTGGCTG CGCCA TGCCC TGGCG TTTAATTTCATCGAA SeD_A4900 4741892 - 4741635 - | protein YjhX SeD_A4901 4742325 - 4742197 - | hypothetical protein SeD_A4902 4742379 - 4742987 + | hypothetical protein TERM 6211 4743292 - 4743311 + F 82 -2.8 -5.47159 | overlap 4743295 TGAATTAGAGTAATG TGGCGCTA TTCA TAGCGTAA TTTTTTCTGTTGCGG SeD_A4903 4743341 - 4744252 + | putative cytoplasmic protein TERM 6212 4744306 - 4744336 + G 100 -8.3 -5.55664 | TTATTTAAATTTGTT CAGACGTCGGAAT TTTTT GTTCTGCCGTCTG TTTTTTTAGTGATGA SeD_A4904 4744255 - 4744368 + | hypothetical protein SeD_A4905 4744429 - 4744557 + | hypothetical protein SeD_A4906 4744550 - 4744918 + | hypothetical protein SeD_A4907 4745589 - 4744915 - | putative dienelactone hydrolase SeD_A4908 4745939 - 4746712 + | Uxu operon transcriptional regulator TERM 6213 4746728 - 4746748 + T 86 -8.9 -4.4773 | opp_overlap 4746727 TTATACCTGGAATAG CGTGGGCAG GCC CAGTCCACG TTTTACTTCCTGTAG trpS 4747726 - 4746713 - | tryptophanyl-tRNA synthetase TERM 6214 4747374 - 4747385 + g 74 -2.2 -5.0538 | CGGGTAAAGCCTTTT TGGG CAAT CTCA TTTTTTACCGTAGGA TERM 6215 4747798 - 4747777 - H 90 -15.9 -2.64274 | opp_overlap 4747774 4747780, overlap 4747754 4747763 4747761 4747764 4747774 4747773 ACGTCCCGAAACGCA GTAGCCGCC TTTC GGCGGCTAC TTAAAGAGGGATAGT TERM 6216 4747780 - 4747795 + H 76 -11.8 -2.71011 | opp_overlap 4747754 4747763 4747761 4747764 4747777 4747774 4747773, overlap 4747774 TCCCGAAACGCAGTA GCCGCC TTTC GGCGGC TACTTAAAGAGGGAT SeD_A4910 4748023 - 4748175 + | hypothetical protein TERM 6217 4748869 - 4748843 - g 71 -12.2 -2.53164 | opp_overlap 4748864 4748865, overlap 4748842 4748845 TCACGCATGAGCAAT CATGGCGACGCC GAA GGCAGCGCCACG GAGACCGTGGATTTG TERM 6218 4748864 - 4748880 + G 74 -7.9 -4.13995 | opp_overlap 4748845 4748843 4748842, overlap 4748865 GACGCCGAAGGCAGC GCCACGG AGA CCGTGGA TTTGGTTTATAGCCA TERM 6219 4748865 - 4748879 + G 72 -11.4 -3.07915 | opp_overlap 4748845 4748843 4748842, overlap 4748864 ACGCCGAAGGCAGCG CCACGG AGA CCGTGG ATTTGGTTTATAGCC SeD_A4911 4748528 - 4748974 + | putative cytoplasmic protein SeD_A4913 4749221 - 4749078 - | hypothetical protein TERM 6220 4749743 - 4749715 - gR 81 -8.2 -4.37658 | opp_overlap 4749734, overlap 4749716 AACGTGGCGATAAAA CTGCGGC-GCAAGC GCT GCT-GCTGCCGCAA ATCGATAGCCTTATT TERM 6221 4749742 - 4749716 - gR 71 -9.5 -3.22113 | opp_overlap 4749734, overlap 4749715 ACGTGGCGATAAAAC TGCGGC-GCAAGC GCT GCT-GCTGCCGCA AATCGATAGCCTTAT SeD_A4912 4749213 - 4749947 + | aspartate racemase SeD_A4914 4750861 - 4749953 - | transcriptional regulator, LysR family TERM 6222 4750208 - 4750190 - G 83 -6 -4.87807 | CGAAGAGACGAAAAA TGTACTGA AAC TCAGTTCA GCATGGCGAGTCAGA iadA 4752152 - 4750980 - | beta-aspartyl peptidase TERM 6223 4751607 - 4751558 - G 86 -7.7 -4.8048 | gap 1, opp_overlap 4751567 TGCCCATATGAAAAA CGCTGACAC-CGGGTTTGCCGCCC AGC AGGCCGCCAACGCGTGATTCAGCG GCCATGCTGGCGAGT SeD_A4916 4752626 - 4752165 - | inner membrane protein YjiG SeD_A4917 4753294 - 4752623 - | transporter gate domain protein TERM 6224 4753944 - 4753912 - R 74 -10.6 -3.14463 | gap 2 AACTGGGGTGAGCAA CGGCCCGT-CA-GGGC GAG GCCCATGGATGGGCCG GGTAATCCGTAGCCA TERM 6225 4754049 - 4754015 - R 73 -9.6 -3.41839 | opp_overlap 4754010 TAGACAGATTGATAA CACTAAAAACCATA GAATAAG TATAGTTTTTAGTG GCATCTTTACCTTGA SeD_A4918 4755351 - 4754167 - | transporter, major facilitator family TERM 6226 4754247 - 4754233 - G 77 -3.5 -5.0133 | gap 1, opp_overlap 4754244, overlap 4754235 4754236 CAGCGCGGCAAAAAA GAGCGC CGCG GCGC-C GCAAAGCGTGGCGTT TERM 6227 4754246 - 4754235 - G 74 -7.2 -4.13561 | opp_overlap 4754244, overlap 4754233 4754236 GCGCGGCAAAAAAGA GCGC CGCG GCGC CGCAAAGCGTGGCGT SeD_A4919 4756842 - 4755571 - | putative inner membrane protein TERM 6228 4756896 - 4756925 + r 79 -10.8 -3.5891 | opp_overlap 4756887 4756891 4756894, overlap 4756895 AAACATCAGATTATC CTGTGCCGGATA AGCCTC TATCCGGCAGAG TGTTTACTTCTCAGC SeD_A4920 4758170 - 4756929 - | multidrug resistance protein MdtM SeD_A4921 4758370 - 4758227 - | hypothetical protein TERM 6229 4758319 - 4758295 - G 74 -2.8 -4.88407 | gap 1, overlap 4758296 4758297 TCATGTAATCAAAAA CGCTGCCGGTG AAAA CACAGACAG-G AAGAGACGCGTTCTG SeD_A4922 4758440 - 4758577 + | hypothetical protein TERM 6230 4758671 - 4758687 + T 88 -12.3 -3.61889 | opp_overlap 4758673 AATCGACGACCTCAA CACCGCA TGA TGCGGTG TTTAAAACCTTTTTG SeD_A4925 4759711 - 4759598 - | hypothetical protein TERM 6231 4760992 - 4761015 + G 71 -7.4 -4.05033 | gap 1, overlap 4760994 GCGCTAAACGCATGG CC-TCCCGGAT TGA AACCGGGATGG TTTATATCAACTGGC SeD_A4926 4759782 - 4761152 + | aldehyde dehydrogenase (NAD) family protein TERM 6232 4761275 - 4761287 + F 76 -4.8 -4.84761 | TTATTTATCCACGTT GCAC TAACC GTGC TTTTTATCCCGGTAT SeD_A4927 4761357 - 4761521 + | hypothetical protein SeD_A4928 4762518 - 4761598 - | transporter TERM 6233 4762150 - 4762184 + g 72 -3.6 -4.72772 | GGCAATACAGATTAA CCGTGTGCCGGA-CCA GTCAA TGGCTTTGGC-CGCGG TTTTACTTATTTTTT TERM 6234 4762348 - 4762358 + g 70 -6.8 -4.13282 | overlap 4762322 4762349 GAGGGAATCAATTCG CCCA CGA TGGG TTTTACCCGTGTGGT TERM 6235 4762423 - 4762440 + g 73 -5.5 -4.67353 | TTCCATATGGGATTC GATCAGC ATTT GCAGATC TTTTTCAATGGCTGC SeD_A4929 4765948 - 4762682 - | HsdR TERM 6236 4765093 - 4765115 + g 74 -4.9 -4.7373 | TCACTTCGTGTTTGG CTTTATCCG GGAAG CAGATAAAG TTTTTGATCACGTCC TERM 6237 4766034 - 4766015 - R 100 -13.6 -4.22041 | AAACCTTAACAGAAA GCCCCTGA TTTT TCAGGGGC AAAATGGGTTATGCG SeD_A4931 4768956 - 4767337 - | type I restriction-modification system, M subunit TERM 6238 4769359 - 4769376 + r 71 -7.7 -3.97368 | ACCGATGACATACAC GCCTTTG TCAC CAGAGGC TTTGTGACTTCCACC SeD_A4934 4770084 - 4769746 - | hypothetical protein SeD_A4935 4770311 - 4770445 + | hypothetical protein TERM 6239 4771022 - 4771038 + T 72 -5.2 -4.57073 | CATACAAAAGTGCAT TTCCAT ATCAA ATGGAA TTTTTAAAGAAAATG SeD_A4937 4772075 - 4771734 - | putative type I restriction-modification system specificity subunit TERM 6240 4772669 - 4772655 - RH 77 -7.2 -4.38774 | AAGATTATATTAAAA TTGGTA GGT TACCAA GAGGCCTTCCCCTGA TERM 6241 4772896 - 4772873 - RH 81 -12.6 -3.18274 | TTTATGGGAAGTTAA CGGATAATAC CAGT GTATTATCCG GCTTGGGGGAATGCC SeD_A4939 4774763 - 4772922 - | DNA helicase II TERM 6242 4774624 - 4774614 - GH 72 -5.4 -4.51812 | opp_overlap 4774610 4774607, overlap 4774610 GGTCAGAATAACAAA GTCA GGA TGAC TATGTTGTTTGCCCA SeD_A4938 4774757 - 4774870 + | hypothetical protein SeD_A4940 4775006 - 4775122 + | hypothetical protein TERM 6243 4775162 - 4775131 - f 82 -13.4 -3.11291 | overlap 4775134 GGTATAATCGTAAGA TAATTGTATATACA TTTT TGTATATACAATTA GGGAAAACACATGCC TERM 6244 4775159 - 4775134 - f 83 -10.7 -3.6947 | overlap 4775131 ATAATCGTAAGATAA TTGTATATACA TTTT TGTATATACAA TTAGGGAAAACACAT SeD_A4941 4775173 - 4775460 + | hypothetical protein SeD_A4942 4775447 - 4775749 + | hypothetical protein SeD_A4943 4776780 - 4775824 - | CobW/P47K family protein SeD_A4944 4776994 - 4776791 - | hypothetical protein TERM 6245 4777047 - 4777019 - R 76 -7.5 -4.3255 | gap 2, opp_overlap 4777026 CTGTTAATGAATAAA GCCGGAT--GGCG GCTTG CGCCTTATCCGGC CTACACTAGCCGGGA TERM 6246 4777081 - 4777056 - R 73 -11.1 -2.62263 | gap 1, opp_overlap 4777055 4777053 ATCCGGCCTACACTA GCCGGG-ATCGC TGT GCGCTACCCGGC ATCAGTTTTAGTGGT SeD_A4945 4779239 - 4777089 - | carbon starvation family protein TERM 6247 4780705 - 4780687 - g 70 -5.2 -4.37886 | overlap 4780688 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATCGACGGTATTGC SeD_A4946 4779606 - 4781267 + | methyl-accepting chemotaxis protein I SeD_A4947 4781528 - 4781379 - | hypothetical protein TERM 6248 4781670 - 4781690 + G 74 -6.8 -4.34402 | gap 1 CAGTGAGGTGTTTAC CGC-GCGCT ATCT GGCGCAGCG TTTTAATATGCAGCG SeD_A4948 4781590 - 4784355 + | sigma-54 interaction domain protein TERM 6249 4784387 - 4784413 + F 71 -10.8 -2.67662 | overlap 4784386 4784406 ACCCGCATCTTTTTT CGGCGCGCCA CTTTTTC TGGCACGCCG CTTGCTCTCTTTTAT SeD_A4949 4784457 - 4784879 + | PTS system fructose subfamily IIA component SeD_A4950 4784894 - 4785355 + | PTS system, IIB component TERM 6250 4785877 - 4785896 + G 70 -6.5 -4.16842 | ATATGGTTAAAGGTT TTCTGGA TGCCAT TCCAGAA TTTATTAAACATGGA SeD_A4951 4785381 - 4786160 + | phosphotransferase enzyme II C component TERM 6251 4786180 - 4786167 - g 71 -9.5 -3.5241 | opp_overlap 4786177, overlap 4786165 GATTTCTGATAAAGA CCGCC AGCA GGCGG AAACCACTGGTCTGG SeD_A4952 4786138 - 4786986 + | fructose permease iid component SeD_A4953 4786999 - 4788057 + | glucosamine--fructose-6-phosphate aminotransferase (isomerizing) TERM 6252 4788445 - 4788431 - g 76 -5.6 -4.77036 | overlap 4788432 CGCTATTACCAAAAA TGCGGA CTC TCCGCT GGCGCAGGCGGCGAC SeD_A4954 4788075 - 4789085 + | glucosamine--fructose-6-phosphate aminotransferase (isomerizing) SeD_A4955 4791510 - 4789219 - | phosphoglycerol transferase I TERM 6253 4790741 - 4790755 + g 71 -4.2 -4.61231 | overlap 4790742 CCCTGCACGAAATAG TTCTGG TAG CCGGAG TTTTTCAGAATATCG SeD_A4956 4792254 - 4791793 - | P-18 protein TERM 6254 4791984 - 4791994 + g 76 -5.4 -4.7416 | CCAACCCCAACTTGT TCAG AAT CTGA TTTTTAACGTTTTCC SeD_A4957 4793049 - 4792312 - | DNA replication protein DnaC SeD_A4958 4793591 - 4793052 - | primosomal protein 1 SeD_A4959 4794157 - 4793684 - | protein YjjB SeD_A4960 4795092 - 4794148 - | hypothetical protein TERM 6255 4795056 - 4795041 - G 74 -4.6 -4.82901 | TCTTGTTGATAAAAA CGTCAG CCGC CAGACG CAACGCATAAGCTTC SeD_A4961 4795261 - 4795106 - | hypothetical protein TERM 6256 4796226 - 4796209 - H 81 -3.3 -5.41143 | opp_overlap 4796211, overlap 4796211 TAGCGCCCAAAAAAA TAGCGCC ATGC GACGCTT ATCAATACACAGTAA SeD_A4962 4796323 - 4796997 + | bgl operon transcriptional activator SeD_A4963 4797506 - 4797048 - | YbaK/prolyl-tRNA synthetase domain protein SeD_A4964 4798453 - 4797665 - | ferric iron reductase protein FhuF TERM 6257 4797764 - 4797742 - G 75 -11.3 -3.40403 | opp_overlap 4797763 TTCTGCGTACCAGAA GACCGTCGC GCATT ACGACGGTC CGCCACAGCGGGTTA TERM 6258 4797831 - 4797813 - G 90 -4.5 -5.40072 | opp_overlap 4797813, overlap 4797815 4797816 4797817 TGCTTTTCAAAAAAA CAGCGCT GGCGT AGCGTTG CCAGCAGGGCTTCGC SeD_A4965 4799500 - 4798574 - | diguanylate cyclase TERM 6259 4799564 - 4799552 - H 71 -10.5 -2.70986 | overlap 4799551 4799549 AACGAGAGTAAATAG CGCCG ACA CGGCG TTGAGAAACAAGAAA SeD_A4966 4799889 - 4800125 + | tryptophan-specific transport protein TERM 6260 4800619 - 4800607 - T 70 -9.1 -3.30243 | opp_overlap 4800613 4800614 ACGTAGGTTGGATAA GACGC TTT GCGTC GCCATCCGGCACATG SeD_A4970 4801694 - 4800666 - | ribosomal RNA small subunit methyltransferase C TERM 6261 4801770 - 4801789 + H 76 -9.2 -3.71378 | GATTTGCTATATTTG CGCCCCTG ATTA CAGGAGCG TTTCGCTATGACATC holD 4801797 - 4802234 + | DNA polymerase III, psi subunit rimI 4802329 - 4802625 + | ribosomal-protein-alanine acetyltransferase yjjG 4802647 - 4803324 + | 5-nucleotidase YjjG TERM 6262 4803920 - 4803906 - g 70 -7.1 -4.18697 | opp_overlap 4803906, overlap 4803898 AAAATGAGCTGAAAA TCGGC TGCGC GCCGA TCACCTGGCCGATTG TERM 6263 4804732 - 4804742 + G 81 -8.2 -4.24002 | overlap 4804731 CGATCTGATTGTCGG CGCC GTG GGCG TTTTGCAGTTTGACG prfC 4803416 - 4805005 + | peptide chain release factor 3 TERM 6264 4805016 - 4805035 + F 100 -16.4 -3.33483 | opp_overlap 4804992, overlap 4805011 ACTGATCCCTTTCCG GGCGCGGC ATCC GCCGCGCC TTCGTACTTTCCCTG SeD_A4975 4805197 - 4805331 + | hypothetical protein osmY 4805407 - 4806024 + | osmotically inducible protein Y TERM 6265 4806037 - 4806063 + F 86 -14.5 -2.62184 | gap 1, overlap 4806037 TAATTCGTCGTAATT CGTCCTCCCGAC GTTT GTCGGGAGG-CG TAATGTGCACCACAC SeD_A4977 4806153 - 4806314 + | hypothetical protein TERM 6266 4806345 - 4806363 + F 100 -14.6 -4.28049 | opp_overlap 4806345 ATATATTGCTATCAA GCCAGTCC AGC GGACTGGC TTTTACGGTTTTAGC TERM 6267 4806363 - 4806345 - f 90 -14.6 -3.1637 | opp_overlap 4806345 ATATATTGCTATCAA GCCAGTCC AGC GGACTGGC TTTTACGGTTTTAGC TERM 6268 4807273 - 4807245 - g 74 -10.9 -3.54543 | ATTTATCCGCCGAAA CCGCTGCACAGCA TGG CGCTGGGCAGCCG TATCCCGGCGCTGCG SeD_A4978 4806417 - 4807511 + | patatin TERM 6269 4807664 - 4807682 + G 74 -8 -3.9712 | overlap 4807658 4807651 CGCGTGCTGGCGCTG GCGGCGCG TTT CCCGTCGC TTTATGCTGCGCTGG SeD_A4979 4807508 - 4808281 + | hydrolase, TatD family SeD_A4980 4809177 - 4808314 - | pyruvate formate lyase activating enzyme TERM 6270 4809122 - 4809103 - GT 77 -9.2 -3.9461 | overlap 4809104 GCCCTGTAAGAATAA TGCCAGGC GGCT GCCTGGCC CATCGACGCAGGAAA TERM 6271 4809121 - 4809104 - GT 80 -12.7 -2.96444 | overlap 4809103 CCCTGTAAGAATAAT GCCAGGC GGCT GCCTGGC CCATCGACGCAGGAA SeD_A4981 4810699 - 4809149 - | hypothetical protein TERM 6272 4809395 - 4809385 - GH 71 -6.8 -4.19177 | ACGCGCCAAGACAAA GCTG AAC CAGC GCCTGCGGATTACGC TERM 6273 4810604 - 4810618 + gH 86 -7.1 -5.06816 | GTTTTCAGCTTCCAG CGCCA GAAAA TGGCG TTTTTGTTCAGGCGT TERM 6274 4810990 - 4810974 - g 70 -6.5 -4.20084 | overlap 4810979 ATGACTGATTTAAAA GCAAGCA GCC TGCGTGC GCTCAAACTGATGGA TERM 6275 4811487 - 4811461 - g 71 -5.8 -4.26903 | overlap 4811440 4811486 CGGATTTCATCAAAA CCTCTACCGGTA AAG TGCCGGTAAACG CTACGCCGGAAAGCG deoC 4810959 - 4811738 + | deoxyribose-phosphate aldolase TERM 6276 4811908 - 4811894 - g 71 -4.2 -4.60889 | opp_overlap 4811893 AATTATTCGTAAAAA GCGTGA TGG TCATGC GTTGAGTGACGAAGA TERM 6277 4811918 - 4811929 + G 74 -4.4 -4.70887 | opp_overlap 4811922, overlap 4811922 TCATGCGTTGAGTGA CGAA GAAA TTCG TTTCTTTATTAATGG deoA 4811862 - 4813184 + | thymidine phosphorylase TERM 6278 4813471 - 4813450 - g 77 -8 -4.11216 | GCTCTACCGGTAAAA TTGCCGCC GGCATG GACGGCAA CGCGGACGTTATTGG TERM 6279 4813631 - 4813601 - g 77 -7.7 -4.3129 | gap 2, overlap 4813628 CAGCGACCACGAAAA CAGCTT-CCC-GCAG GAA CTGCTGGATAAGCTG GTGAAACGCGCCAAC deoB 4813236 - 4814459 + | phosphopentomutase deoD 4814669 - 4815388 + | purine nucleoside phosphorylase TERM 6280 4816131 - 4816110 - g 71 -4.5 -4.60041 | gap 1, overlap 4816111 4816112 ACGCAGTCCGAAAAA CTCAATCGCT ATC AGCAATTG-G CGGAAGACGCGCTCG TERM 6281 4816848 - 4816809 - g 76 -9.3 -3.96148 | gap 2, opp_overlap 4816790, overlap 4816810 4816813 GTCGCTGATGATAAA CGCATCAGCGCGGGCTTTC AGGA GATTGCCCGCGC-GATG-G TGGGAAAATTGAAGT SeD_A4986 4815936 - 4816895 + | HipA domain protein SeD_A4987 4817916 - 4816900 - | lipoate-protein ligase A TERM 6282 4817523 - 4817534 + g 83 -7.2 -4.56775 | CGGAGACTTTGCGAT CGCC GTCC GGCG TTTTTACGACCAGAT SeD_A4989 4818594 - 4817950 - | protein smp precursor serB 4818711 - 4819679 + | phosphoserine phosphatase SerB TERM 6283 4820025 - 4820054 + G 83 -8.5 -4.41494 | gap 1 AGTTTGACCGCGTGC TGG-GCGGCGGGGT GGT ACCCGGCAGCGCCA TTTTGATTGGCGGTA radA 4819763 - 4821145 + | DNA repair protein RadA TERM 6284 4822174 - 4822155 - g 79 -7.2 -4.4891 | gap 1, opp_overlap 4822155 4822153 4822151 CCGACTACGATAAAA TTGCGC-TG GGC CATGCGCAA TATATTGATTTCGCA SeD_A4992 4821296 - 4822528 + | nicotinamide-nucleotide adenylyltransferase TERM 6285 4822569 - 4822537 - T 76 -12 -2.74443 | opp_overlap 4822546, overlap 4822536 4822532 GGGATAAGAACCAAT GCCTGATGCGACGC TTACC GCGTCTTATCAGGC CTACAGTTTCACAAC SeD_A4993 4824313 - 4822646 - | ABC transporter, ATP-binding protein TERM 6286 4823821 - 4823788 - G 76 -11.7 -3.13403 | gap 1, overlap 4823786 GCTTTTCCAGCAACA GACGGCACAGCGCCAC GCG ACGGCGCT-CGCCGCC GGACAGTTTTTCGAC TERM 6287 4825176 - 4825159 - g 71 -7.7 -3.92324 | opp_overlap 4825162, overlap 4825160 CGGCGGAATATCAAA CGATCGC CTCA GCGATCA TTACCCTCGCTAATG TERM 6288 4825366 - 4825354 - g 84 -9.1 -4.29227 | opp_overlap 4825359, overlap 4825358 TTAATGAGGAACAAA CGCAG GCG CTGCG CGATATCGTTGCCTG SeD_A4994 4824522 - 4826459 + | soluble lytic murein transglycosylase TERM 6289 4826600 - 4826626 + G 100 -13.8 -4.1711 | GGAGTTACTCCGTCA GGCATATGCAGA GGA TCTGCATCTGCC TTTATTACAACTGAT trpR 4826517 - 4826843 + | trp operon repressor TERM 6290 4826891 - 4826864 - T 70 -9 -3.30124 | opp_overlap 4826865 TCGTAGGCCGGATAA GGCGAAGCGGCC ATCC GGCAACATCGCC GCGAAATGCCTGATG SeD_A4996 4827460 - 4826945 - | hypothetical protein TERM 6291 4827719 - 4827689 - g 73 -6 -4.37886 | TTAGGCCGCACAAAA CGCACGGCGGAG ATTATCG CCCAGGCGTGCG GGTGTGATATTACCT TERM 6292 4828080 - 4828068 - g 73 -9.1 -3.80573 | TCGATTACCAGGAAA GCCAG TGG CTGGC GTCTGGGTGGGTGGT SeD_A4997 4827509 - 4828156 + | phosphoglycerate mutase family protein rob 4829022 - 4828153 - | right origin-binding protein SeD_A4999 4829219 - 4829707 + | protein CreA TERM 6293 4829914 - 4829954 + G 71 -6.1 -4.2828 | gap 1, overlap 4829912 4829917 CAGCGGCTTTGAGCT GTGTCGGCAGTTGCTGGA ACGCCA TCCTGCG-CTGCCGATTC TTTTCCTGACTGCCC TERM 6294 4829917 - 4829951 + G 81 -8.6 -4.26327 | gap 1, overlap 4829912 4829914 CGGCTTTGAGCTGTG TCGGCAGTTGCTGGA ACGCCA TCCTGCG-CTGCCGA TTCTTTTCCTGACTG SeD_A5000 4829720 - 4830409 + | transcriptional regulatory protein CreB TERM 6295 4830863 - 4830895 + G 72 -12.1 -2.73275 | overlap 4830861 TGATGTACGTAGCCG CGCCGATAATCAG CGATGGA CGGATTATCGGCG TCCTGTCTGTCGGTA TERM 6296 4831650 - 4831663 + G 77 -8.1 -4.10007 | TGGTATTCCTGATTT TGCGC TGCC GCGCA TTTTCGACCGATTCT SeD_A5001 4830409 - 4831833 + | sensor protein CreC TERM 6297 4832068 - 4832036 - T 78 -12.8 -2.62616 | gap 1 CTATTCGTCAGAGTA CCAGCG-GCCCACAA AAGG TTGTCGGCCCGCTGG TGGCGAGAGCTCTAT SeD_A5004 4834372 - 4833287 - | putative major fimbrial subunit TERM 6298 4833331 - 4833351 + g 70 -5.3 -4.46212 | overlap 4833323 4833333 TGGCATTCGCTTGCC CGGCCGTTA CCG TGGCGGCGG TTTTATAGTAGCGCG TERM 6299 4833508 - 4833498 - G 83 -8.2 -4.41348 | overlap 4833499 4833500 CTGTCGGTAAAGAAA CCGG CGT CCGG CGCCTGAATACCCAA SeD_A5005 4834970 - 4834413 - | putative fimbrial subunit SeD_A5006 4837417 - 4834988 - | outer membrane usher protein SfmD TERM 6300 4836345 - 4836357 + g 71 -10.5 -3.30441 | AGCGTACTCTCTATT CCGCC ATA GGCGG TTATGCCGCCTGCTA TERM 6301 4836940 - 4836953 + g 70 -6.7 -4.20106 | overlap 4836928 TACCAGGGCGCAGGT TAGCG TATT CGCTA TTTTCCGTCCGGTTT SeD_A5007 4838254 - 4837571 - | pili assembly chaperone SeD_A5008 4838870 - 4838325 - | putative fimbrial chaparone TERM 6302 4838939 - 4838923 - R 72 -5.3 -4.56358 | opp_overlap 4838912, overlap 4838908 GATAGCCATATAAAA TAAAATA TTA TATTTTA CTCTGTATGCGCTTC SeD_A5009 4839880 - 4839209 - | putative inner membrane protein SeD_A5010 4840021 - 4840140 + | hypothetical protein TERM 6303 4840238 - 4840193 - T 100 -13.3 -4.70046 | gap 1, overlap 4840197 4840223 4840224 GAGAAAAGTACAAAA TGCAGGCAGGCGGCGTTTT-AC TGA GCGAAATCGCCGCCTGCCGGAA CTCCTCCCGGCGGGA TERM 6304 4840234 - 4840197 - T 100 -17.1 -2.83208 | gap 1, overlap 4840193 4840223 4840224 AAAGTACAAAATGCA GGCAGGCGGCGTTTT-AC TGA GCGAAATCGCCGCCTGCC GGAACTCCTCCCGGC TERM 6305 4840792 - 4840818 + T 95 -10.9 -4.70879 | opp_overlap 4840792 GGGGGACATAAGAAA CAGCCAGTAAG AATAA CTTACCGGCTG TTTTTACGGTTTGGC TERM 6306 4840818 - 4840792 - T 100 -13.1 -4.38927 | opp_overlap 4840792 GGGGGACATAAGAAA CAGCCAGTAAG AATAA CTTACCGGCTG TTTTTACGGTTTGGC arcA 4841562 - 4840846 - | aerobic respiration control protein ArcA TERM 6307 4842400 - 4842412 + G 74 -7.7 -4.13767 | CCCTTGCCGACGCGC TCCAC GAT GTGGA TTTTACCGTCGCGAC SeD_A5013 4842198 - 4842884 + | RNA methyltransferase, TrmH family, group 1