TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.467879 %AT, 4144846 nt, 39112 terms. Intergenic: 0.53756 %AT, H2T: 657483 nt, 6084 terms; T2T: 181179 nt, 3915 terms; H2H: 232864 nt, 3727 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|16758993|ref|NC_003198.1| Salmonella enterica subsp. enterica serovar Typhi str. CT18, complete genome (length 4809037) thrL 190 - 255 + | thr operon leader peptide TERM 1 302 - 280 - f 100 -12.7 -5.51046 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCACC TGAAC AGTGCGGGC TTTTTTTTCGACCAG TERM 2 280 - 302 + F 100 -12 -5.75342 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCAC CTGAACA GTGCGGGC TTTTTTTTCGACCAG TERM 3 1328 - 1351 + G 71 -11 -2.87132 | AAGGGATGATTGGGA TGGCGGCG CGTGTTTT CGCCGCCA TGTCTCGCGCCGGGA TERM 4 1626 - 1646 + G 70 -9.7 -3.36096 | overlap 1623 1619 CAATATCGTGGCGAT CGCTCAGGG ATC TTCTGAGCG TTCCATTTCTGTGGT thrA 337 - 2799 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 2801 - 3730 + | homoserine kinase thrC 3734 - 5020 + | threonine synthase yaaA 5887 - 5114 - | hypothetical protein yaaJ 7396 - 5966 - | putative amino-acid transport protein TERM 5 6790 - 6802 + g 71 -6.2 -4.37092 | TCAGCCATTGCATCA GGCG GGCGA CGCC TTTTATGCCGCGGAT talB 7665 - 8618 + | transaldolase B mogA 8729 - 9319 + | molybdenum cofactor biosynthesis protein yaaH 9942 - 9376 - | hypothetical protein TERM 6 9868 - 9854 - G 82 -5.6 -5.03314 | TCCAGGGCGAAAAAA CCGGCA TTG TGCAGG TTAAGCAGAATGGTG TERM 7 10080 - 10057 - R 72 -8.2 -3.69395 | overlap 10066 10074 TCTATGATCTAATAA GGGGGAAA AGAAAATA TTTCCCCC TGTGAGGGCATTCAC STY0010 10805 - 10092 - | hypothetical protein yaaI 11245 - 10841 - | hypothetical protein TERM 8 11899 - 11871 - g 70 -5.2 -4.37886 | gap 1, opp_overlap 11871 11870 11874, overlap 11872 11875 TCATGCCGTACAAAA TCAT-CGGCGCCG ACAA CGGCGACGCATGG CTTGATGTGAAAGGT dnaK 11594 - 13510 + | molecular chaperone DnaK TERM 9 13532 - 13508 - f 83 -2.1 -5.63645 | opp_overlap 13514 13531, overlap 13512 GTAAAAGATAAAAAA TAATCGCCCTT TGA ACGGGTAATTA CTGGCACGGGCGAAG TERM 10 13531 - 13573 + F 80 -12.6 -3.01924 | opp_overlap 13508 13533, overlap 13539 CTTTGAACGGGTAAT TACTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATGCA TGTTAAGGGCAGATA TERM 11 13571 - 13533 - f 90 -15.2 -2.73542 | opp_overlap 13531 13539 TTGAACGGGTAATTA CTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATG CATGTTAAGGGCAGA TERM 12 13539 - 13565 + F 100 -18 -2.9518 | opp_overlap 13533, overlap 13531 GGGTAATTACTGGCA CGGGCGAAGAGG TTT CCTCTCCGCCCG TGTATGCATGTTAAG TERM 13 13677 - 13664 - g 82 -5.2 -4.98531 | GCGTGAAATCAAAAA GGCG TATAAG CGCC TGGCCATGAAATATC dnaJ 13596 - 14735 + | chaperone protein DnaJ TERM 14 14762 - 14785 + F 100 -11 -5.65177 | TTGTATTTTTCTTCA GCCCGGGTGT ATGT ATATCCGGGC TTTTTTTCTGCCTGT STY0014 15020 - 15967 + | putative regulatory protein STY0015 16094 - 16438 + | hypothetical protein TERM 15 16457 - 16472 + T 79 -9 -4.16146 | opp_overlap 16454 16457 TCATTCGCAATATCA GGCTCA TCCG TGAGCC TTTTACGCGTCTTTT STY0016 17032 - 16499 - | hypothetical protein STY0017 17492 - 17049 - | hypothetical protein TERM 16 17744 - 17755 + H 72 -3 -5.02502 | ACGGTGTTGTTAACC TCAT TTTT ATGA TTTTTATATCATCTA STY0018 17873 - 19972 + | putative chitinase TERM 17 20030 - 20013 - g 91 -14.1 -3.09516 | opp_overlap 20013 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG TERM 18 20013 - 20030 + G 100 -14.1 -4.36914 | opp_overlap 20013 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG STY0019 20004 - 21155 + | hypothetical protein TERM 19 22848 - 22865 + G 75 -6.3 -4.66163 | gap 1 AGCGCGACTTACGGC GTC-CCGA CCG TCGGCGAC TTTTTACGTAAAGAT STY0020 21198 - 23060 + | hypothetical protein TERM 20 23099 - 23128 + F 95 -11.6 -4.25104 | CTGGCCTATTAGTTT GAGATTCGAAGG CGCGTT CTTTCGAATCTC TTTTCCTGCGCCCCC STY0021 23341 - 24045 + | hypothetical protein TERM 21 24158 - 24148 - f 74 -5.4 -4.60487 | GATTATTTTTAAAAA GTCA ATA TGAC TAAAGGAGATAGGCC bcfA 24473 - 25015 + | fimbrial subunit TERM 22 25010 - 25028 + F 89 -5.3 -5.69473 | overlap 25024 TTTAGCATGGTTTAT TCCTGAT TCCTT ATCGGGA TTTTTTTCTCGTCTG TERM 23 25092 - 25059 - f 77 -8.8 -3.89346 | TTGGGAGGCGAGAAA GGGGCGTTACGCGC GTCACT GCGCGTAACAAACC GACGGCATCAGGATA TERM 24 25428 - 25439 + G 75 -3.6 -4.87133 | TCATTACCGACCGAT CGCG AAAG CGTG TTTTATTTAAACAGT TERM 25 25567 - 25550 - g 78 -6.9 -4.57073 | overlap 25551 TATCCGCCCGAAAAA TCTGGCG GAGG CGCCAGC CCATGCCCCGGCAAC TERM 26 25566 - 25551 - g 73 -10.4 -3.33922 | overlap 25550 ATCCGCCCGAAAAAT CTGGCG GAGG CGCCAG CCCATGCCCCGGCAA bcfB 25116 - 25802 + | fimbrial chaperone TERM 27 27563 - 27547 - f 82 -8 -4.60292 | TACAACAATAACAAA TCCGCA GGCGA TGCGGA GCGCGATCAAATTTT bcfD 28429 - 29436 + | fimbrial subunit bcfE 29437 - 29982 + | fimbrial subunit bcfF 29998 - 30516 + | fimbrial subunit TERM 28 30737 - 30715 - g 95 -8.4 -4.8622 | GCCTGGAACCAAAAA CGAAGGGAAT ATT ACGCCCTTCG TGGTCACGCCGCCAT bcfG 30509 - 31213 + | fimbrial chaperone TERM 29 31228 - 31247 + F 86 -11.4 -3.68261 | overlap 31240 ACCTATTTTTCAGGC GTCTCCCG ATAG CGGGAGGC TTTCCGATCTTATCG STY0033 31278 - 32123 + | hypothetical protein STY0034 32162 - 32449 + | hypothetical protein STY0035 32998 - 32549 - | hypothetical protein TERM 30 33634 - 33624 - g 70 -6.8 -4.09108 | overlap 33625 TTGAATCTATAGAAA GCAC ACT GTGC GATAAAACAGATGCG TERM 31 33999 - 34017 + G 86 -10.4 -4.15044 | opp_overlap 34014 ATATGTTCTCTTCTT TCAATGCT GAT AGCATTGA TTTATTCAAGAGCAG TERM 32 34291 - 34274 - g 79 -2.7 -5.16472 | AAAAATGCCAAAAAA CTGATAT CAAC ATTTCAG TCGACCTTTCTTTTT STY0036 33368 - 34363 + | LysR family transcriptional regulator TERM 33 34447 - 34476 + T 86 -5.1 -5.54338 | gap 1, overlap 34447 34448 AATGCTATATATTTA TC-CCCTTCTTTTT TTA AAGAAGAGGGGAGG TTTTTGTTTTCATTG STY0038 34816 - 34511 - | putative transcriptional regulator TERM 34 34560 - 34547 - G 80 -4.5 -5.02074 | overlap 34548 34549 GCACCGTGGAAAAAA CTGGC TCAA GCCAA AGCCTTTAAGGTCGC TERM 35 34946 - 34962 + H 81 -3.8 -5.3104 | opp_overlap 34941 34957, overlap 34957 ACAAAAATGATGGTT TTTTAG AAAAA CTAAAA TTTTATTTTTAGTCG TERM 36 34997 - 34957 - H 82 -7.2 -4.82901 | opp_overlap 34946 34957, overlap 34941 34963 GGTTTTTTAGAAAAA CTAAAATTTTATTTTTAG TCGTT CTAAAAATAAAATGATAG TAGTGTTAATTTTTA TERM 37 34991 - 34963 - H 93 -9.2 -4.82678 | opp_overlap 34957, overlap 34957 TTAGAAAAACTAAAA TTTTATTTTTAG TCGTT CTAAAAATAAAA TGATAGTAGTGTTAA STY0039 35339 - 37057 + | sulfatase TERM 38 37098 - 37062 - T 77 -10.2 -3.44146 | opp_overlap 37046 37057 37055 37065, overlap 37065 TGTTTGCATAACTAA GTATGTTATGCGGCCG GTTAT CGACCGCATAACATTA TGGCTTATTTGCTAA TERM 39 37065 - 37095 + T 95 -14.8 -3.49938 | opp_overlap 37062 37065, overlap 37046 37057 37055 TTGCATAACTAAGTA TGTTATGCGGCCGG TTA TCGACCGCATAACA TTATGGCTTATTTGC TERM 40 37095 - 37065 - T 93 -16.3 -2.87274 | opp_overlap 37046 37065 37057 37055, overlap 37062 TTGCATAACTAAGTA TGTTATGCGGCCG GTTAT CGACCGCATAACA TTATGGCTTATTTGC STY0040 38674 - 37103 - | putative secreted 5'-nucleotidase TERM 41 38738 - 38700 - R 83 -4.5 -5.35815 | overlap 38703 38704 TACATTAAAGAAAAA CAATGCCTGTAGTCGTG TCATT CACGACTACAAACCGGG GAAATTAAGTAATAT TERM 42 38735 - 38703 - R 93 -9.2 -4.74052 | overlap 38700 38704 ATTAAAGAAAAACAA TGCCTGTAGTCGTG TCATT CACGACTACAAACC GGGGAAATTAAGTAA TERM 43 38734 - 38704 - R 85 -12.7 -3.41991 | overlap 38703 38700 TTAAAGAAAAACAAT GCCTGTAGTCGTG TCATT CACGACTACAAAC CGGGGAAATTAAGTA STY0041 39534 - 38773 - | hypothetical protein STY0042 40128 - 41621 + | putative secreted sulfatase TERM 44 41665 - 41700 + F 100 -11.2 -4.86731 | gap 1, overlap 41668 CACTTAGGGCGATGC CCACCTGATCCGGTCAC TCT GTG-CCGGATCAGGTTC TTTTATTTCAGGGAA TERM 45 41668 - 41697 + F 100 -17.3 -4.54026 | gap 1, overlap 41665 TTAGGGCGATGCCCA CCTGATCCGGTCAC TCT GTG-CCGGATCAGG TTCTTTTATTTCAGG TERM 46 42499 - 42512 + G 74 -8.1 -4.01411 | opp_overlap 42478 42480, overlap 42493 42507 GGCGGCCTGGTGCGG CCTGC CGCC GCAGG TTTGCGTTTTTGCTC TERM 47 42507 - 42518 + G 78 -5.8 -4.7254 | opp_overlap 42480, overlap 42493 42499 GGTGCGGCCTGCCGC CGCA GGTT TGCG TTTTTGCTCCCACCT STY0043 41720 - 42910 + | sulfatase regulatory protein TERM 48 43366 - 43394 + G 70 -3 -4.78848 | GAATTACAAAAACTG TCCCGTCGCGCT AATCA AGCGGAACGCGA TTTTGTGTTTCCCGC STY0045 43198 - 44181 + | hypothetical protein TERM 49 44299 - 44244 - f 72 -4.9 -4.58395 | gap 2, opp_overlap 44243 44258 CGGACGGCTTAAAAA TCCAGAGTATTAATTTTCGTGGTCCCC ATGA GGGG-CGATGAG-ATTAATACACTGGA GATTTATCATGAATA TERM 50 44580 - 44570 - g 87 -8.2 -4.58663 | AGGATGCGGCAAAAA CGGC GAT GCCG GTAGAACATCTTTAC TERM 51 45805 - 45795 - g 74 -6.8 -4.2558 | opp_overlap 45795 CACGTTTGATGAAAA TGGC CGC GCCA TCTCTTGCCAGCCTG STY0046 44308 - 46023 + | sulfatase TERM 52 46075 - 46058 - f 87 -6.9 -5.15634 | opp_overlap 46058 46054 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 53 46058 - 46075 + F 72 -9.1 -3.56704 | opp_overlap 46058, overlap 46054 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 54 46652 - 46690 + G 82 -11.1 -3.80174 | gap 1 CGCTGAAAATTTTCC TGATGGCGCTGGCGATCA TCGA TGACC-TCGGCGCCATCA TTATTATCGCACTGT TERM 55 46939 - 46912 - g 81 -4.1 -5.27335 | gap 1, overlap 46914 CCGCTGAAAGAAAAA CACGGACGCTCG CCGGC CAAGCGTCTG-G AGCATGTTCTGCACC TERM 56 46938 - 46914 - g 77 -7.8 -4.27026 | overlap 46912 GCTGAAAGAAAAACA CGGACGCTCG CCGGC CAAGCGTCTG GAGCATGTTCTGCAC nhaA 46186 - 47352 + | pH-dependent sodium/proton antiporter TERM 57 47487 - 47501 + G 90 -8.5 -4.82901 | AAGGTTCTGTCGTGG GCGCC GCAGA GGCGC TTTTTCTGACGCCGC TERM 58 48119 - 48131 + G 70 -3.3 -4.82901 | overlap 48120 AAGGCGTTTGGCGCG ACGCA TGA TGCGA TTTTTGTGGCGCCGA nhaR 47414 - 48313 + | transcriptional activator NhaR TERM 59 48329 - 48365 + T 85 -12.3 -3.3344 | opp_overlap 48331 48350, overlap 48332 ACATACCTACCGTAA TACTTCCGGCTGCGG AACTAAC CCGCAGCCGGAATCA TTCTACAAGTTCAGT TERM 60 48363 - 48331 - T 93 -15.6 -3.06671 | opp_overlap 48329 48332, overlap 48350 ATACCTACCGTAATA CTTCCGGCTGCGGA ACTAA CCCGCAGCCGGAAT CATTCTACAAGTTCA TERM 61 48332 - 48362 + T 100 -18.4 -2.83747 | opp_overlap 48331 48350, overlap 48329 TACCTACCGTAATAC TTCCGGCTGCGG AACTAAC CCGCAGCCGGAA TCATTCTACAAGTTC STY0049 50407 - 48368 - | putative glycosyl hydrolase TERM 62 50120 - 50134 + g 71 -7.8 -4.0641 | opp_overlap 50120 CCGCAGGCGCCAAAA CTCCTG CAA CAGGGG TTTGTGTGGATGGCG STY0050 51820 - 50447 - | putative transport protein TERM 63 52245 - 52231 - R 100 -8.5 -5.64274 | opp_overlap 52231 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT TERM 64 52231 - 52245 + r 88 -8.5 -4.83169 | opp_overlap 52231 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT rpsT 52540 - 52277 - | 30S ribosomal protein S20 STY0053 52646 - 52861 + | hypothetical protein ribF 52869 - 53807 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 65 54018 - 54000 - g 89 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCATATGCGAA TERM 66 55070 - 55047 - g 76 -3 -5.03314 | opp_overlap 55051 55067 55069, overlap 55048 55049 55051 TGCATGTCGAAAAAA TGCAGCACAG CTAT CCGTGCTGTT GGCGTCACAAAACGC ileS 53852 - 56686 + | isoleucyl-tRNA synthetase TERM 67 57050 - 57062 + G 75 -6.3 -4.65895 | GGCACGGCTTCGTTG TCGAT ATG ATCGA TTTTTACGTCGGCGA TERM 68 57101 - 57115 + G 80 -10 -4.07124 | TCGCGACGTTCAACC TTGCCG ATA CGGCAA TTTGTATCGGTGCTG lspA 56686 - 57186 + | lipoprotein signal peptidase TERM 69 57251 - 57294 + F 72 -5.3 -4.64157 | gap 2, opp_overlap 57233 57232 57252, overlap 57252 57292 AGCGCCATCAGGCAA ACGTGGTGCCGGATGGCGGTG AAAA CGCC-TTATCCGGC-CTACGG TTTTATCGTTCTTTG TERM 70 57252 - 57293 + F 70 -8.8 -3.36867 | gap 2, opp_overlap 57233 57232 57252, overlap 57251 57292 GCGCCATCAGGCAAA CGTGGTGCCGGATGGCGGTG AAAA CGCC-TTATCCGGC-CTACG GTTTTATCGTTCTTT fkpB 57341 - 57790 + | FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase TERM 71 58584 - 58564 - g 85 -12.5 -3.53224 | opp_overlap 58548 GAGGCGTGGGTGAAA GACGCCGCC TGT GTCGGCGTC ACCGCTGGCGCTTCC ispH 57793 - 58743 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 72 58890 - 58908 + F 78 -6 -4.78752 | opp_overlap 58890, overlap 58882 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTGGGTTGTAAT TERM 73 58908 - 58890 - f 74 -6 -4.62783 | opp_overlap 58890 58882 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTGGGTTGTAAT TERM 74 59766 - 59748 - g 76 -3.1 -4.98531 | GCTGGAAAGGAAAAA CGATTGA ACTGA TCGATCG CGGTGAAAGCTACTT STY0059 58943 - 60145 + | hypothetical protein TERM 75 60852 - 60902 + G 73 -5.3 -4.62336 | gap 1, overlap 60855 GTAGTATGCGCACTG GCGTCCGGATGCACGATCTCTGTG CGAT CGCCTGGCTGGTGCGTCCGGA-GC TTTTTACCCTGCAAT yaaF 60161 - 61081 + | ribonucleoside hydrolase RihC citB 61789 - 61103 - | transcriptional regulatory protein citb TERM 76 61141 - 61172 + g 79 -7.2 -4.40963 | TCTCCGGCCTGCCCA CTTTCCCGTAGCTG ATCT CCGCTTCGAGAAAG TTATTTTTCACGCCT TERM 77 61316 - 61341 + g 78 -6.8 -4.57581 | gap 1 GTTTTCATCAATTCC CCGCAG-TCCG CTATT CGGTTCTGCGG TTTGTTCTTTGGCCT citA 63410 - 61791 - | sensor kinase cita TERM 78 62472 - 62487 + g 73 -10.4 -3.37796 | opp_overlap 62472 62471 GCGAAAGCTAATAAC CCAGCC CTGA GGCTGG TTGTCAATAATGACC TERM 79 63537 - 63515 - R 95 -12.1 -4.27192 | opp_overlap 63510 AAATTTGGATGAAAA TGGGATACG ACATG CGTATCCCA TCCACTATTACATCG oadB 64846 - 63545 - | oxaloacetate decarboxylase beta chain TERM 80 63703 - 63732 + g 74 -2.8 -4.92757 | gap 1, overlap 63708 CCATCGGCACTGCCG ACACCCCGGCTGA ACCTA TCAGC-GGGTTGA TTTTGTTCTTACTGC oadA 66634 - 64859 - | pyruvate carboxylase subunit B TERM 81 66387 - 66411 + g 88 -11.3 -4.1196 | CCGAGCAGGTTCTGG CCGCGCAGCAG CAT CTGCAGCGGGG TTTTGGGCATGGCTT oadG 66889 - 66650 - | oxaloacetate decarboxylase subunit gamma citC 68388 - 67048 - | citrate-sodium symporter TERM 82 68246 - 68228 - G 70 -5.2 -4.49167 | opp_overlap 68222, overlap 68229 68231 AACATAAGAGCAAAA CCACCGAC TAA GTCAGTCG GTATAGCATTATAGA TERM 83 68488 - 68502 + H 79 -4.4 -5.12068 | GAATGGTTGTGTTTT TAATTA ATT TAATTA TTTTTATTAACTCTG TERM 84 69393 - 69411 + G 73 -5.9 -4.37886 | AACATCTGGCTCCAG CGCTGGG GATTA CCCATCG TTTTGTCGGCAGTGA TERM 85 69418 - 69430 + G 73 -6.2 -4.50976 | TACCCATCGTTTTGT CGGC AGTGA GCCG TTTTGTCCTCTGACC citC2 68633 - 69676 + | [citrate (Pro-3S)-lyase] ligase citD2 69706 - 69999 + | citrate lyase subunit gamma TERM 86 70516 - 70552 + G 76 -12.2 -3.03771 | gap 1 CCGAGCTGTTCTACG CCCGCTGCGCAGTGCTG CATG CGGCGC-GCGTTGCGGG TATTGCCGCCTATGA citE2 69996 - 70865 + | citrate lyase beta chain citF2 70876 - 72396 + | citrate lyase alpha chain citX2 72396 - 72947 + | citx protein TERM 87 73263 - 73273 + G 75 -6.8 -4.4267 | opp_overlap 73259, overlap 73270 TGGTGTGAATACCCA TCGC GGG GCGA TTTTCGCTTTTGGCC TERM 88 73270 - 73280 + G 70 -6.8 -4.15565 | overlap 73263 AATACCCATCGCGGG GCGA TTT TCGC TTTTGGCCTGCTGAG citG2 72925 - 73833 + | citg protein TERM 89 73858 - 73889 + F 83 -8.8 -4.33274 | opp_overlap 73862, overlap 73860 73862 CTTTCATTCTCTCCA GCAATGATTCATCC TGTG GGATGAATCATGTC TTTTACTGATATCGC TERM 90 73860 - 73887 + F 79 -10 -3.76811 | opp_overlap 73862, overlap 73858 73862 TTCATTCTCTCCAGC AATGATTCATCC TGTG GGATGAATCATG TCTTTTACTGATATC TERM 91 73862 - 73885 + F 85 -12.6 -3.45743 | opp_overlap 73862, overlap 73860 73858 CATTCTCTCCAGCAA TGATTCATCC TGTG GGATGAATCA TGTCTTTTACTGATA TERM 92 73885 - 73862 - f 81 -12.6 -3.14344 | opp_overlap 73860 73858 73862 CATTCTCTCCAGCAA TGATTCATCC TGTG GGATGAATCA TGTCTTTTACTGATA dapB 74013 - 74834 + | dihydrodipicolinate reductase TERM 93 74907 - 74889 - f 95 -11.8 -3.99405 | opp_overlap 74889 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTGCCCC TERM 94 74889 - 74907 + F 100 -11.8 -5.26119 | opp_overlap 74889 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTGCCCC TERM 95 76622 - 76604 - g 80 -8.8 -4.0827 | AGATATGGACAGAAA CGTGGTGA TGA TCACCGCG CAGAACCACGGATTT carA 75696 - 76844 + | carbamoyl phosphate synthase small subunit TERM 96 76903 - 76885 - g 74 -2.2 -5.07275 | opp_overlap 76895 76897, overlap 76889 GTACAGATATAAAAA GCATCCTG ATT CTGGGCGC GGGCCCGATTGTTAT carB 76860 - 80087 + | carbamoyl phosphate synthase large subunit TERM 97 80141 - 80160 + F 100 -10.8 -5.80817 | opp_overlap 80141 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG TERM 98 80160 - 80141 - f 79 -10.8 -3.63707 | opp_overlap 80141 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG caiF 80361 - 80756 + | DNA-binding transcriptional activator CaiF caiE 81430 - 80834 - | carnitine operon protein CaiE TERM 99 80860 - 80885 + g 91 -9.7 -4.64676 | gap 1, overlap 80880 ATTTTGGCTTCACGT CCG-TCGTGCCT TTC AGGCGCGGTCGG TTTTCTTCGACCTGC caiD 82327 - 81542 - | carnitinyl-CoA dehydratase TERM 100 82349 - 82379 + r 81 -8.2 -4.48743 | opp_overlap 82349, overlap 82350 82351 TCTCCAGATAAATAG TTTCCCGGCGGGAG GGA TTCCTGCCGGAAGG TTTATTTCAGATTTT TERM 101 82350 - 82378 + r 71 -9.5 -3.27619 | opp_overlap 82349, overlap 82349 82351 CTCCAGATAAATAGT TTCCCGGCGGGAG GGA TTCCTGCCGGAAG GTTTATTTCAGATTT TERM 102 82351 - 82377 + r 70 -10.8 -2.55487 | opp_overlap 82349, overlap 82350 82349 TCCAGATAAATAGTT TCCCGGCGGGAG GGA TTCCTGCCGGAA GGTTTATTTCAGATT caiC 83934 - 82381 - | putative crotonobetaine/carnitine-CoA ligase TERM 103 83661 - 83681 + g 95 -11.1 -4.59773 | opp_overlap 83661 GTAAGCGGGCATTAA TCGGCACCA TAA TGGCGCCGA TTTTTGCCAGTCCAA TERM 104 83681 - 83661 - G 84 -13.3 -3.15579 | opp_overlap 83661 GTAAGCGGGCATTAA TCGGCACCA TAA TGGCGCCGA TTTTTGCCAGTCCAA TERM 105 83959 - 83995 + r 76 -9.4 -3.79519 | gap 1, opp_overlap 83954 TCCACTGAAATCAGG CGTGA-GCGCTAACCGG AAAA CCGAGTAGCGCATCGCG TTTAATCCTCAACTT caiB 85214 - 83997 - | crotonobetainyl-CoA:carnitine CoA-transferase TERM 106 85296 - 85257 - R 77 -10.6 -3.30243 | opp_overlap 85289 85290, overlap 85260 85262 ATGTAGGCCGGATAA GCACAGCGCCATCCGGCA TGAT TGCCTGATGGCGACGCCC CGCGTCTTATCAGGC TERM 107 85293 - 85260 - R 82 -13.1 -2.8294 | opp_overlap 85289 85290, overlap 85257 85262 TAGGCCGGATAAGCA CAGCGCCATCCGGCA TGAT TGCCTGATGGCGACG CCCCGCGTCTTATCA TERM 108 85291 - 85262 - R 78 -12.1 -2.96274 | opp_overlap 85289 85290, overlap 85260 85257 GGCCGGATAAGCACA GCGCCATCCGGCA TGAT TGCCTGATGGCGA CGCCCCGCGTCTTAT TERM 109 85290 - 85302 + r 70 -9.1 -3.30124 | opp_overlap 85262 85260 85257, overlap 85289 TGATTGCCTGATGGC GACGC CCC GCGTC TTATCAGGCCTACAA caiA 86468 - 85326 - | crotonobetainyl-CoA dehydrogenase caiT 88020 - 86503 - | L-carnitine/gamma-butyrobetaine antiporter fixA 88501 - 89271 + | putative electron transfer flavoprotein FixA fixB 89287 - 90228 + | putative electron transfer flavoprotein FixB TERM 110 90546 - 90578 + G 70 -5.5 -4.49364 | overlap 90547 CGATGACTATCGACT ACTGCAATGGTGAAG ATG CTTCAGCGTCGCAGG TTTCTTATTCCGTTT TERM 111 90800 - 90784 - g 74 -7.9 -4.07568 | opp_overlap 90783 TCTGCTGGCTGAAAA GCTGGGC ATG GCCAAGC GTGTTGAGGCATCGC TERM 112 91509 - 91491 - g 95 -5.2 -5.42259 | overlap 91493 CCATGCGTAAAAAAA TCCTGCGC CAT GCGAAGAA AGTGGGCTTCATCAA fixC 90278 - 91564 + | putative oxidoreductase FixC TERM 113 91812 - 91801 - g 75 -5.8 -4.56775 | overlap 91809 ACGGCGCTGGAAAAA TGGG AATA CCCA CGCGGGACGTTTGGC fixX 91561 - 91848 + | ferredoxin like protein FixX TERM 114 91886 - 91944 + F 95 -16.6 -2.57931 | overlap 91895 91934 TAGGCCGGATTAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGTAAACGC CTTATCCGGCCTACA TERM 115 92286 - 92298 + G 70 -5.5 -4.41348 | opp_overlap 92267 TATCGGCGTTATCTC CGTGG CGA CCATG TTTGTTTCCACGCCG yaaU 91996 - 93159 + | putative metabolite transport protein STY0091 93425 - 93655 + | putative lipoprotein STY0093 93940 - 94362 + | hypothetical protein STY0095 94876 - 94586 - | hypothetical protein STY0096 95086 - 95280 + | hypothetical protein TERM 116 95602 - 95592 - f 73 -4 -4.80077 | CTAAAATAAAAACAA TGAA CTT TTCA TCTAAATAATTTTTC TERM 117 95802 - 95791 - g 100 -4.4 -6.13503 | GAGTAATAAAAAAAA TCTG TCCG CAGA AGAGACGGATCTTAC TERM 118 95913 - 95897 - g 72 -3.6 -4.73388 | overlap 95899 AAGGCTGATGAAAAA TGCGCC GTCAA GGCGAA ACCGACGTGGGATAA STY0097 95774 - 95998 + | hypothetical protein TERM 119 97337 - 97283 - g 89 -2.8 -5.4433 | AGAGATAAACAAAAA CGGTGGCGCAAATCAAGCAGGAAATA TCG CATTTGCATCCTGATTTCAGCCATCG TTCAGGGACGCGGAT STY0098 96050 - 97354 + | puatative sulfatase STY0099 97351 - 97662 + | hypothetical protein yabF 98069 - 98599 + | glutathione-regulated potassium-efflux system ancillary protein KefF TERM 120 99553 - 99579 + G 95 -15.2 -3.38812 | opp_overlap 99561, overlap 99551 99560 GGACCCTGGGCGTAC CGGCAAAACAGC GTC GCTGGTTTGCCG TCTTATTAGGCCAGG TERM 121 99571 - 99561 - g 70 -6.8 -4.11216 | opp_overlap 99560 99553 99551 GGCGTACCGGCAAAA CAGC GTC GCTG GTTTGCCGTCTTATT TERM 122 99696 - 99708 + G 77 -4.7 -4.93296 | overlap 99695 99697 GTCGCGCTGTCGATG GCGGC CAC GCCGA TTTTTCTGGTGCTGC kefC 98592 - 100454 + | glutathione-regulated potassium-efflux system protein KefC folA 100653 - 101132 + | dihydrofolate reductase TERM 123 101137 - 101175 + T 70 -9.7 -3.02263 | gap 2, opp_overlap 101159 101160, overlap 101152 AGCGTCGTTAACGCT GTAGTGCCGGATGGCGGCG AAA TGCC-TTATCCGGC-CTAC TCTTGAGCCGGATGT apaH 102076 - 101228 - | diadenosine tetraphosphatase apaG 102464 - 102087 - | ApaG ksgA 103288 - 102467 - | dimethyladenosine transferase pdxA 104274 - 103285 - | 4-hydroxythreonine-4-phosphate dehydrogenase surA 105560 - 104274 - | peptidyl-prolyl cis-trans isomerase SurA TERM 124 105210 - 105167 - G 72 -11.2 -3.14564 | gap 1 TCATCTCTTTACGAA TCTGG-TTACGGTAGGTTGAA TAG TTCAGCCCATCGTAAGCCAGA CGGCTGCGCATCTGA imp 107968 - 105614 - | organic solvent tolerance protein TERM 125 106256 - 106240 - G 71 -5.9 -4.23674 | TTTGACCAACAGAAA CGTTAAA ACG TTCAACG GCGGCATCATCATAA TERM 126 108252 - 108278 + G 77 -8.6 -4.10161 | opp_overlap 108245 AAGATAATTGGCGTC GCCGTAGCCC TGATGAT GGGCGGCGGC TTTTGGGGCGTGGTC TERM 127 108369 - 108380 + G 77 -3.6 -5.00616 | opp_overlap 108362 GCCAACCAGCGGGAA CGGC AGGC GCTG TTTTTTGCCACCACC djlA 108222 - 109034 + | DNA-J like membrane chaperone protein rluA 109788 - 109129 - | 23S rRNA/tRNA pseudouridine synthase A TERM 128 109835 - 109823 - R 70 -9.1 -3.44051 | overlap 109826 GCGTGACGACGATAA GACGC AGC GCGTC CAGACGCCAGCCTGC hepA 112706 - 109800 - | ATP-dependent helicase HepA TERM 129 110147 - 110163 + g 75 -3.6 -4.96848 | overlap 110142 110141 110145 CAAACTCGACCTGGG CGGCCA GATTG TTGCCG TTTTTATCTAACAGC TERM 130 110267 - 110285 + g 85 -6.7 -4.85782 | gap 1 CCAGTTCGACCAGCA GCG-TGCC GACG GGCAGCGC TTTATTTTTCAACAG TERM 131 110655 - 110672 + g 70 -6.9 -4.15106 | overlap 110645 110648 110669 CAGCAGGCGGTCGCG GCCCTGT TCTA ACTGGGC TTTTAGCGCTTCATG TERM 132 111316 - 111331 + g 74 -7.5 -4.07568 | opp_overlap 111310, overlap 111310 111311 TAGAGCATATCGCGG GCGCG ATCTTC CGCGC TTTTACGCGCGCCCA polB 115231 - 112880 - | DNA polymerase II TERM 133 113083 - 113093 + g 81 -6.8 -4.71426 | ACTGCGCCGGACGAC CCTG CTT CAGG TTTTGTTCATCCGCC TERM 134 115569 - 115585 + r 77 -10.9 -3.2029 | opp_overlap 115568 AAAAGCCCGAAGGAT CATCAGC CAC GCTGATG TTGAATGTATTGCTT STY0114 116011 - 115571 - | putative IS element transposase STY0115 116031 - 117239 + | putative IS element transposase TERM 135 117577 - 117542 - f 89 -9 -4.56597 | overlap 117544 GTCTGGCCTGAAAAA CGGGAGAAGGCGTT TTTCCGCT AACGCCTGCTCCTG CGACAATCGCGCAGT TERM 136 117575 - 117544 - f 71 -10.2 -2.60032 | overlap 117542 CTGGCCTGAAAAACG GGAGAAGGCGTT TTTCCGCT AACGCCTGCTCC TGCGACAATCGCGCA TERM 137 117983 - 118002 + F 71 -3.7 -4.78981 | opp_overlap 117983 TATTTCTCGGATTAA CAAAAAA GCGATA TTTTTTG TTTGTTTTAATTAAT TERM 138 118624 - 118643 + G 95 -10.6 -4.58283 | opp_overlap 118624 GACCAGATTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA TERM 139 118643 - 118624 - g 83 -12.8 -3.20858 | opp_overlap 118624 GACCAGATTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA STY0117 118231 - 118650 + | hypothetical protein araD 119351 - 118656 - | L-ribulose-5-phosphate 4-epimerase araA 120994 - 119492 - | L-arabinose isomerase TERM 140 120446 - 120463 + g 74 -7.7 -4.18197 | gap 1 GACTTCACGCATATT GTC-GCCG AAG CGGCAGAC TTTTAGCTGGCGGGT TERM 141 120605 - 120594 - G 71 -5.8 -4.36914 | CGCGCGCCGATAAAA CCGA ACTC TCGG CCGCCATGCGCAGTC araB 122714 - 121005 - | ribulokinase TERM 142 122077 - 122052 - G 71 -7.6 -4.00756 | gap 2, opp_overlap 122052 GAGTTCATCAAAGAA GCTCGCGGGCGG CAGA CCGCCC-C-AGC TTTCATGCCACAGTG araC 123055 - 123900 + | DNA-binding transcriptional regulator AraC yabI 124019 - 124786 + | DedA family integral membrane protein thiQ 125532 - 124825 - | thiamine transporter ATP-binding subunit thiP 127126 - 125516 - | thiamine transporter membrane protein TERM 143 125614 - 125585 - G 71 -10.7 -3.29677 | gap 1, overlap 125578 AAAACAGAGCAGCAA CAGTATCAGCGCGG TCA CCGCGCCG-TCCTG GCTGCGGTAGGAGCC TERM 144 125745 - 125726 - G 70 -9.2 -3.67564 | opp_overlap 125713 125732, overlap 125716 125713 AAGTACGCAGGCAAA CGCCAGCG CCTG CGCCAGCG GACGTTTCAGCGCCC TERM 145 126539 - 126520 - G 77 -4.2 -4.95758 | gap 1, opp_overlap 126520, overlap 126521 126523 126524 AGCAGAGCATAAAAA TCAGCGCCG CGA CGG-GCGGA ATTTGGCGGCGCAGC tbpA 128085 - 127102 - | thiamine transporter substrate binding subunit TERM 146 127729 - 127744 + g 78 -6.8 -4.56597 | opp_overlap 127717 127729 ATAGCCGTAATCGAA CGGCAC AAAT GTGTCG TTTTTCCAGCCGCCG yabN 129921 - 128263 - | transcriptional regulator SgrR TERM 147 128715 - 128727 + g 71 -4.7 -4.56597 | TCAGCGTGAGGGTTT CCAGC CCG GCGGG TTTTTCGCCCGGGCC TERM 148 129748 - 129718 - G 70 -9.7 -3.32022 | overlap 129719 TCCGGTATACAGGAA CGTCAGACGCGAA CGCTT TCCGCGTCCGACC TCGGCTTCCCATGTT TERM 149 129747 - 129719 - G 78 -13.2 -2.58999 | overlap 129718 CCGGTATACAGGAAC GTCAGACGCGAA CGCTT TCCGCGTCCGAC CTCGGCTTCCCATGT TERM 150 130198 - 130220 + r 100 -16.4 -5.64421 | opp_overlap 130195 AGCCTAAAATCACCC GCCAGCAGAT AAT ATCTGCTGGC TTTTTTATTTCGGCT TERM 151 130356 - 130338 - R 100 -8.8 -5.30686 | AAGACGTATAAAAAA TGCCGGAA TAT CCCCGGCA TGAGCGACTGATGAG leuD 131076 - 130471 - | isopropylmalate isomerase small subunit leuC 132487 - 131087 - | isopropylmalate isomerase large subunit TERM 152 131539 - 131517 - G 81 -12 -3.52192 | TGTAAGCCCATATAA GCCAGCGC TTTTTCG GCGCTGGC GCGCTCAACCGGATC TERM 153 132006 - 132018 + g 70 -9.1 -3.6502 | ATGGTTTTAGCGCGC CCCTG TTT CAGGG TTTGCGTCGCCAGTA leuB 133581 - 132490 - | 3-isopropylmalate dehydrogenase TERM 154 133502 - 133484 - G 74 -6.6 -4.36262 | opp_overlap 133484, overlap 133485 ATACGCATATCAAAA CGGCTGCG TAC CGCATCCA TAACTTTCAGGGCTT leuA 135152 - 133581 - | 2-isopropylmalate synthase TERM 155 133618 - 133628 + g 70 -5.4 -4.44355 | TCTTTATTTTGAGCT TTGC GTT GCAA TTCTTTTTCAACTTC TERM 156 135195 - 135222 + r 72 -8.4 -3.75629 | opp_overlap 135200, overlap 135200 TTGCGTCAGGCATAA AAAAACCCGCAC AACG GCGCGGGTTTTG TTTGACTTCGAGCTG TERM 157 135200 - 135217 + r 91 -8.3 -4.94058 | opp_overlap 135200, overlap 135195 TCAGGCATAAAAAAA CCCGCAC AACG GCGCGGG TTTTGTTTGACTTCG TERM 158 135217 - 135200 - R 100 -10.5 -5.64274 | opp_overlap 135200 135195 TCAGGCATAAAAAAA CCCGCAC AACG GCGCGGG TTTTGTTTGACTTCG leuL 135326 - 135240 - | leu operon leader peptide leuO 135983 - 136927 + | leucine transcriptional activator TERM 159 136934 - 136970 + F 100 -16.2 -4.65838 | opp_overlap 136932 136940 AAGCGATAAAACCGG GCAGAATAAATCAGAA ACAAA TTCTGGTTTATTCTGC TTTTTAGCGTATGTC ilvI 137249 - 138973 + | acetolactate synthase 3 catalytic subunit ilvH 138973 - 139467 + | acetolactate synthase 3 regulatory subunit TERM 160 139591 - 139616 + F 100 -9 -5.75945 | opp_overlap 139589 CCAACAGGAATTATC GCCCAACCCA ATATCA TCGGTTGGGC TTTTTTTTGCGAAAT fruR 139751 - 140755 + | DNA-binding transcriptional regulator FruR yabB 141361 - 141819 + | cell division protein MraZ mraW 141821 - 142762 + | S-adenosyl-methyltransferase MraW TERM 161 142839 - 142852 + G 70 -6.7 -4.19238 | TGCCTTGCCTGGCGT GATCG GTGA CGATC TTTTGCGGTTCGGGA TERM 162 143083 - 143070 - g 81 -8.1 -4.2803 | opp_overlap 143069 143067 GATCGCAACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCCC ftsL 142759 - 143124 + | cell division protein FtsL ftsI 143140 - 144906 + | penicillin-binding protein 3 precursor TERM 163 145252 - 145216 - g 70 -7.1 -4.14739 | overlap 145218 145246 TGAGCCATCTGAAAA CATGCGTCTGGTGGCGG TGA CCGGCACCAATGGCAAG ACCACCACCACCCAA TERM 164 146020 - 145994 - g 100 -16.6 -4.57073 | GATGCGCTGGAAAAA GCATTGCAGGCG GCG CGCCTGCACTGC GCCGGAAAATTGTGG murE 144893 - 146380 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murF 146377 - 147735 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 165 148666 - 148680 + G 71 -5.7 -4.2349 | opp_overlap 148666 148665 TGGGTTCCTTTAAAC TACGC GGACA GCGTA TTTTCCGTATGGCGC mraY 147729 - 148811 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 148814 - 150130 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 166 150911 - 150938 + G 77 -7.8 -4.26076 | gap 1 ATCCGTTCGGCAGCG GTTATCAGCTGAC GCA GTC-GCTGATGGC TTTTGGTCGCGGTGA ftsW 150130 - 151374 + | cell division protein FtsW murG 151371 - 152438 + | N-acetylglucosaminyl transferase murC 152557 - 154032 + | UDP-N-acetylmuramate--L-alanine ligase TERM 167 154433 - 154418 - g 95 -5.4 -5.30348 | gap 1, opp_overlap 154418 AGCGAAGAACAAAAA GCG-CGA ATT TCGGCGC TGGGTTTACCGCTGA ddl 154025 - 154945 + | D-alanine--D-alanine ligase ftsQ 154947 - 155777 + | cell division protein FtsQ ftsA 155774 - 157036 + | cell division protein FtsA ftsZ 157097 - 158248 + | cell division protein FtsZ TERM 168 158428 - 158418 - g 82 -5.4 -5.04385 | CACACCGGCAAAAAA GTCA CCC TGAC ATTACGCCCTGCGCC TERM 169 159193 - 159183 - g 70 -6.8 -4.08216 | GCAGTCCTGGCAAAA CAGG AAG CCTG GGAATTTGTGACCTT lpxC 158349 - 159266 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 170 159291 - 159334 + F 100 -6.7 -6.63964 | opp_overlap 159291, overlap 159278 CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCTAGTCG TTTTTTTTTTTACTA TERM 171 159405 - 159418 + F 74 -5.9 -4.64334 | opp_overlap 159405 GGTTAAATGGAAACA CGGCG CGTT CGCTG TTTTCTTAGCCGATT yacA 159548 - 160045 + | SecA regulator SecM TERM 172 160075 - 160091 + F 74 -11.5 -2.79175 | overlap 160074 TTTACTTTATTTGTA GCTCCGC GGC GCGGGGC ATTTGAGACTTTATT TERM 173 161048 - 161061 + G 70 -9.5 -3.36515 | overlap 161046 CGTCACCGCCGCGCT GCGCG CGCA CGCGC TGTTTACCCGTGACG TERM 174 161223 - 161213 - g 75 -6.8 -4.50661 | opp_overlap 161214 161216, overlap 161214 161216 AATTCAGAATGAAAA CCAG ACG CTGG CGTCTATTACCTTCC secA 160107 - 162812 + | preprotein translocase subunit SecA TERM 175 162953 - 162924 - f 85 -13.7 -3.11339 | opp_overlap 162930, overlap 162930 AGCATTGAACACAGA TAAAAAGGCGCAG GCGA CTGCGCCTTTTTT ATGGATGCACCAAGA TERM 176 162947 - 162930 - f 100 -12.7 -5.09685 | opp_overlap 162930, overlap 162924 GAACACAGATAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA TERM 177 162930 - 162947 + F 100 -12.7 -5.28176 | opp_overlap 162930 162924 GAACACAGATAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA mutT 162968 - 163363 + | nucleoside triphosphate pyrophosphohydrolase STY0158 164386 - 163397 - | putative aldo/keto reductase TERM 178 164181 - 164159 - G 75 -6.2 -4.56597 | overlap 164161 164162 TTTCGTCGCTAAAAA TACCCGATCG CGA CGATCGGCGA TGGCTCTTCCGACTA TERM 179 164179 - 164161 - G 73 -8.8 -3.90048 | overlap 164159 164162 TCGTCGCTAAAAATA CCCGATCG CGA CGATCGGC GATGGCTCTTCCGAC TERM 180 164178 - 164162 - G 75 -12.3 -2.93708 | overlap 164161 164159 CGTCGCTAAAAATAC CCGATCG CGA CGATCGG CGATGGCTCTTCCGA STY0159 164472 - 165413 + | lysR family transcriptional regulator yacG 165601 - 165410 - | zinc-binding protein TERM 181 165550 - 165524 - G 72 -3.7 -4.77165 | GCGTTTAGAACAAAA TGGGCGGAA GGGGCTAAT TTCCCCCCA GACGACCGGTTTACC yacF 166354 - 165611 - | hypothetical protein coaE 166974 - 166354 - | dephospho-CoA kinase TERM 182 166582 - 166605 + g 74 -4.5 -4.7254 | CGTTTCGGGCGTAAC GTCAACCAC CAGTAC GCGGTTGGC TTTTTGATACAACCT TERM 183 166766 - 166755 - G 74 -2.2 -5.0538 | overlap 166757 CCGGATGCGAAAAAA TACG CTCA CGCA GTGCCCGGCGACGTA TERM 184 167568 - 167537 - g 74 -2.2 -5.03314 | gap 1, opp_overlap 167546, overlap 167539 CTGATTTCGAAAAAA CCGTGCAG-ATTCTG GCG CTGAATCCTGCGCTG AACTTTGTCTGTATT guaC 167200 - 168243 + | guanosine 5'-monophosphate oxidoreductase TERM 185 168250 - 168273 + T 93 -14.6 -3.32963 | opp_overlap 168246 AGCCTCTAATATTCT GGCTGGCGTA AATG TGCGCCAGCC TTATCCCATCCCGCT hofC 169476 - 168274 - | type IV pilin biogenesis protein hofB 170851 - 169466 - | hypothetical protein ppdD 171298 - 170861 - | putative major pilin subunit TERM 186 171510 - 171488 - R 100 -17 -2.91582 | CAGGTGATTTATAGA CCCGACGGCG CAG CGCCATCGGG CGGAGAGGATCAGCA nadC 172413 - 171520 - | quinolinate phosphoribosyltransferase ampD 172501 - 173064 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 173061 - 173915 + | regulatory protein AmpE STY0170 174957 - 174007 - | putatuve glycosysl hydrolase STY0171 176363 - 174957 - | putative symporter TERM 187 175240 - 175212 - G 72 -3.8 -4.82667 | gap 1, opp_overlap 175220, overlap 175213 CCAGGAGAGCAAAAA GCC-GACCATCGC CCCG GCAATCGCCAGGC CCAGTTTCAGGAAGA TERM 188 175279 - 175297 + g 74 -6.7 -4.27584 | opp_overlap 175261 175279, overlap 175261 CCGGAGAAGCTAATA CCGGTAA TGCGT TTGCCGG TTTTCCATTCGCCGT TERM 189 175455 - 175431 - G 85 -11.3 -4.02911 | opp_overlap 175430 175428, overlap 175445 GTCAAAGAAATAGAA CGCGCAGGAGA AAA TCGCCAGCGCG ATATTGGTCCAGAAA TERM 190 175456 - 175445 - G 73 -5.8 -4.4648 | opp_overlap 175430 175428, overlap 175431 ACGCGCAGGAGAAAA TCGC CAGC GCGA TATTGGTCCAGAAAA TERM 191 176509 - 176486 - R 100 -16 -3.51924 | CTGTGAGGCAGATAA CACCCTCCCC GGAC GGGGAGGGCG GAAAAGTAACGCCAC aroP 177897 - 176527 - | aromatic amino acid transporter TERM 192 176881 - 176866 - G 73 -10.4 -3.38272 | GAGCAGCACGCACAA CGCCGT CACG ACGGCG GAAACCAAAATGGAG TERM 193 177684 - 177668 - G 74 -7.9 -4.11484 | opp_overlap 177671, overlap 177671 GCGAAGTGGCTAAAA GAGCCGG CGA CCGGTTC TTCAACCACCATCTC pdhR 178463 - 179227 + | transcriptional regulator PdhR TERM 194 179350 - 179296 - f 74 -8.1 -3.90112 | gap 1, opp_overlap 179317, overlap 179300 179303 TGCGCGGCAACTAAA CGCAGAACCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGGTTCCA-G ATAACTCAACGTATT TERM 195 179347 - 179300 - f 86 -14.4 -2.70979 | opp_overlap 179317, overlap 179296 179303 CGGCAACTAAACGCA GAACCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGGTTC CAGATAACTCAACGT TERM 196 179344 - 179303 - f 79 -10.3 -3.49878 | opp_overlap 179317, overlap 179300 179296 CAACTAAACGCAGAA CCTGTCTTATTAAGCTTTC TGAC GAAAGTTTAATGGGACAGG TTCCAGATAACTCAA TERM 197 181502 - 181478 - g 71 -12.1 -2.50479 | overlap 181477 181474 181482 CTGAACGAAAACTAC CACATGCCGGC AAT GCCAGCAGGTG CCGAGGAAGGTATCC aceE 179387 - 182050 + | pyruvate dehydrogenase subunit E1 TERM 198 182369 - 182341 - g 70 -5.2 -4.49353 | gap 1, overlap 182344 182345 GCAGAAGAGAAGAAA GAAGC-GGCGCCG GCAG CAGCACCTGCTGC GGCAGCGGCGAAAGA TERM 199 182378 - 182344 - g 100 -12.9 -4.33203 | overlap 182341 182345 GAAGAGAAGAAAGAA GCGGC-GCCGGCAGCAG CAC CTGCTGC-GGCAGCGGC GAAAGACGTTCACGT TERM 200 182376 - 182345 - g 83 -13 -3.18295 | gap 1, overlap 182341 182344 AAGAGAAGAAAGAAG CGGCGCCGGCAGCAG CAC CTGCTGC-GGCAGCG GCGAAAGACGTTCAC TERM 201 182657 - 182635 - g 70 -9 -3.69323 | GCAGCACCAGCGAAA GCGGAAGCCG CTC CGGCTGCGGC TGCTCCAGCAGCAGC TERM 202 183467 - 183457 - g 71 -8.2 -3.78775 | opp_overlap 183457 GTCTTCATCATGAAA GCGG TTG CCGC TGCTCTGGAACAGAT aceF 182065 - 183954 + | dihydrolipoamide acetyltransferase TERM 203 183980 - 183963 - f 100 -14.1 -4.75174 | opp_overlap 183963 GATGTAAGCGAAAAA GCCGGCC CGAC GGCCGGC TTTTTTTTGATAATC TERM 204 183963 - 183980 + F 100 -14.1 -5.88471 | opp_overlap 183963 GATGTAAGCGAAAAA GCCGGCC CGAC GGCCGGC TTTTTTTTGATAATC TERM 205 184937 - 184924 - g 78 -2.3 -5.16572 | opp_overlap 184930 ATGGAAGGCAAAAAA GCCCC GGCT GAAGC GCAGCGTTATGATGC TERM 206 185020 - 184992 - g 73 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCGGGC AAA GCTGGCGTGGAAG TTGACGACCGTGGCT lpdA 184153 - 185580 + | dihydrolipoamide dehydrogenase TERM 207 185615 - 185581 - f 74 -7 -4.33582 | overlap 185571 185567 185566 185583 185614 GCGAAGAAGAAATAA TCTTCTGCGGGTGGCA ATG CGCCACCCGATACAGA AAAGCGGCTTTACAG TERM 208 185639 - 185614 - f 72 -10.5 -2.89564 | opp_overlap 185619, overlap 185581 185583 185619 GCGCCACCCGATACA GAAAAGCGGCT TTAC AGCCGCTTTTT TTATGCATGGCAAAT TERM 209 185619 - 185634 + F 100 -10.4 -5.64274 | opp_overlap 185619 185614 ACCCGATACAGAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG TERM 210 185634 - 185619 - f 93 -10.4 -4.61199 | opp_overlap 185619, overlap 185614 ACCCGATACAGAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG STY0178 185869 - 186153 + | hypothetical protein STY0179 186982 - 186191 - | hypothetical protein TERM 211 186471 - 186490 + g 71 -4.9 -4.67234 | opp_overlap 186484, overlap 186473 186484 ACGTCGCCTGCTTTG GTTGGCC AGTACA GGCCATC TTTTTGGCCTTCGCT TERM 212 186842 - 186855 + g 73 -5.9 -4.42765 | GTCATCGCCCAGTAG CGCGG TAAG CTGCG TTTCGTTTTTTCCGG yacH 188617 - 186995 - | hypothetical protein TERM 213 187070 - 187080 + g 71 -8.2 -3.86015 | opp_overlap 187068 GGTGTTCAAGTGACT GCCG CGA CGGC TTTCTAGGCCGCGTA TERM 214 187304 - 187331 + g 70 -3.2 -4.68724 | gap 1, overlap 187306 GGATTTATTCAGTGT CTGCTG-CGCCGC CTC GCGACGACTGCTG TTTTGTGTTCCGTCA TERM 215 187957 - 187972 + g 73 -10.4 -3.39521 | opp_overlap 187957 TTGGCACGTACACCA CCTGCG GATT CGCAGG TTCAATTTTGATGAC TERM 216 189532 - 189502 - g 76 -3.3 -5.00616 | gap 1, opp_overlap 189487 CGCTGGCGGAAAAAA TCACC-GTCACCGT TTTC AAAGTGACCGGCGA AACGAATACCGACGA TERM 217 190734 - 190710 - g 71 -5.7 -4.30987 | ACCGTTGAGAAGAAA GGCAAGAAAAA CAT CTTCTCTGGCC GCATCCTGGAAATCG acnB 189006 - 191603 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 218 191682 - 191701 + F 100 -11.4 -5.54338 | opp_overlap 191682 ACCGGGCCTACAAAA CCCATCGC AACT GCGGTGGG TTTTTATTTTCATTC TERM 219 191701 - 191682 - f 83 -9.2 -4.37092 | opp_overlap 191682 ACCGGGCCTACAAAA CCCATCGC AACT GCGGTGGG TTTTTATTTTCATTC TERM 220 191722 - 191732 + F 91 -2.4 -5.88565 | ATTTTCATTCCGCCT GCTG TTC CCGC TTTTTTTCTTCTCCG STY0182 191791 - 192153 + | hypothetical protein TERM 221 192235 - 192251 + F 100 -13.7 -5.4505 | TCACCACACATTCCA GCCGGGA GTA TCCCGGC TTTTTTATTGCAGAA TERM 222 192534 - 192522 - g 95 -10.5 -4.65895 | opp_overlap 192521 192529 TGCCTTATTTAAAAA CGGCG CGG CGCCG CTGATTGGCGCTTTT TERM 223 192529 - 192545 + G 83 -7.2 -4.53765 | opp_overlap 192522, overlap 192521 TTTAAAAACGGCGCG GCGCCG CTGAT TGGCGC TTTTCTGCTGTGTAT TERM 224 193066 - 193085 + G 71 -4.2 -4.56883 | ATTCTGCTCGGCGTG CTGACAAC GTTC GTTGGCGG TTTCTTTAATATTCG kdgT 192388 - 193341 + | 2-keto-3-deoxygluconate permease ygbK 193338 - 194609 + | hypothetical protein pdxA 194599 - 195582 + | 4-hydroxythreonine-4-phosphate dehydrogenase 2 TERM 225 195844 - 195805 - g 100 -9.2 -4.90869 | overlap 195808 195809 ACCACCAATGAAAAA CAACTGCGATCGCCCGCT GAAA AACGGGCGATTGCACGCG TTGCCGCATCGCTGG TERM 226 195841 - 195808 - g 100 -11.7 -4.54681 | overlap 195805 195809 ACCAATGAAAAACAA CTGCGATCGCCCGCT GAAA AACGGGCGATTGCAC GCGTTGCCGCATCGC TERM 227 195840 - 195809 - g 95 -15.2 -3.31182 | overlap 195808 195805 CCAATGAAAAACAAC TGCGATCGCCCGCT GAAA AACGGGCGATTGCA CGCGTTGCCGCATCG STY0186 195592 - 196359 + | putative transcriptional regulator speD 197183 - 196389 - | S-adenosylmethionine decarboxylase TERM 228 197165 - 197175 + g 72 -2.4 -4.93595 | GATTGTTAAAGCCAT GCAG TTT CAGC TTTTTCAATTTTTAT speE 198064 - 197204 - | spermidine synthase TERM 229 198146 - 198121 - R 81 -12.7 -3.16154 | opp_overlap 198124, overlap 198124 CAACATCATAGCTAA CAATGACCGTG GATG CACGGTCATTA TTTCAGCAATAGGAT TERM 230 198124 - 198143 + r 95 -12.2 -3.91716 | opp_overlap 198121 198124 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG TERM 231 198143 - 198124 - R 93 -12.2 -3.71487 | opp_overlap 198124, overlap 198121 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG yacC 198518 - 198171 - | hypothetical protein TERM 232 198771 - 198796 + G 70 -6.7 -4.07568 | CTGGGGGTTGCATCA GCGCTGCCGCT GTGG AGCCGCGCCGC TTTTGCCGCCGAACG TERM 233 200172 - 200160 - g 76 -10.5 -3.70811 | overlap 200154 200153 TCAGAGAACGGCAAA GCGCC AGC GGCGC ACAGAACGGGCTGGA yacK 198720 - 200330 + | multicopper oxidase TERM 234 200381 - 200400 + T 100 -15 -3.35358 | opp_overlap 200366 200381, overlap 200375 CGCTACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG TERM 235 200400 - 200381 - T 100 -15 -3.30124 | opp_overlap 200381 200375, overlap 200366 CGCTACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG gcd 202798 - 200408 - | glucose dehydrogenase TERM 236 201218 - 201232 + g 70 -7.1 -4.07885 | GAACGGCTGAGTTTT GGCGA CATAA TCGCC TTTTGCCGCGCCCTG TERM 237 201238 - 201256 + g 75 -5.8 -4.56597 | CATAATCGCCTTTTG CCGCGCCC TGC GGGACCGG TTTTTCCGGAGCGGG TERM 238 203046 - 203026 - g 71 -11.9 -2.53015 | ATACTGTTGAAGTCA TGATCCCCG AAG CGGAGATCA AAGCACGTATTGCCG hpt 203004 - 203540 + | hypoxanthine-guanine phosphoribosyltransferase yadF 204260 - 203598 - | carbonic anhydrase TERM 239 203839 - 203851 + g 73 -5.5 -4.56597 | AGCGCGTCCAGACGT TGCTC TTC GGGCA TTTTTCCCAACAGCG TERM 240 204442 - 204406 - g 100 -5.1 -5.57054 | gap 1, opp_overlap 204406 204407, overlap 204407 AACAACTTAAAAAAA CCTATCCCG-GCGGCG TTCAGG CGCTGCGCGGCATAGA TTTGCAGGTCGAAGC TERM 241 205050 - 205034 - g 76 -5.1 -4.72986 | TACTTCCATGAAAAA TCTGCTT TCA AAGCTGA AATCGGAGACATTTA yadG 204369 - 205295 + | ABC transporter ATP-binding protein TERM 242 205838 - 205852 + G 71 -6.4 -4.2828 | overlap 205827 CTGACGCCGCTGACC TACCTC GGC GGGGTA TTTTACTCGCTGACG yadH 205292 - 206062 + | ABC transporter integral membrane protein TERM 243 206068 - 206098 + F 87 -10.5 -4.10657 | opp_overlap 206068, overlap 206069 GCGTAGCTGATACGA TTCTCCTCTTCTC CTGGA GGGAAGAGGAGAC TTTTGACGGCTGTCA TERM 244 206069 - 206097 + F 85 -14 -3.06073 | opp_overlap 206068, overlap 206068 CGTAGCTGATACGAT TCTCCTCTTCTC CTGGA GGGAAGAGGAGA CTTTTGACGGCTGTC yadI 206167 - 206607 + | putative PTS system IIA component TERM 245 206621 - 206645 + F 72 -2.7 -5.05782 | opp_overlap 206642, overlap 206642 GATCAATACCATTGA CGACGCTTTTG CTA CAATAACGGCG TTTTTTCGCCTCGGT TERM 246 206789 - 206761 - g 74 -10.4 -3.52909 | gap 1, overlap 206759 GCAAACGACGAAAGA TGCCGCC-ATCTG GTCG CAGATTGGCGACA AAATGGTGACCGTAG yadE 206675 - 207898 + | hypothetical protein panD 208285 - 207905 - | aspartate alpha-decarboxylase TERM 247 208348 - 208365 + r 74 -5.5 -4.59109 | overlap 208333 CTGCTTTGGAAATTC TCAGGCA GTAT TGCCCGA TTTTTAACCCCTGTC panC 209234 - 208380 - | pantoate--beta-alanine ligase TERM 248 209128 - 209168 + g 76 -9.8 -3.78329 | overlap 209128 ACCAGCTTCATATGG C-CGTCGTGCAGGTTGCCCA TAG TGGG-AACCAGTGCGACGCG TTTGCCTTCCTGACG TERM 249 209336 - 209324 - R 70 -9.1 -3.30124 | overlap 209326 CTGTAGGCCGGATAA GACGC GTC GCGTC GCTATCCGGCACGGT panB 210154 - 209360 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase staG 211439 - 210264 - | putative fimbrial-like adhesin protein staF 212072 - 211476 - | putative fimbrial protein TERM 250 212020 - 212001 - G 89 -13.6 -3.53224 | opp_overlap 211993 CAGCGTCGCGCTAAA CAGGGCTG TTGC CAGCCCTG AAAATAACGTGGCGA staE 212686 - 212072 - | putative fimbrial protein TERM 251 212662 - 212672 + g 80 -5.4 -4.94972 | TAAAAATCACGACGC GCAA TAT TTGC TTTTTCATTATCATC staD 213261 - 212695 - | putative fimbrial protein TERM 252 213024 - 213039 + g 100 -4.6 -5.77632 | CAAACTTAAAGTTTT TCTGCG ATTC CGCTGA TTTTTTTATAATTTT staC 215839 - 213248 - | putative outer membrane usher protein TERM 253 213952 - 213962 + g 70 -5.4 -4.47007 | overlap 213945 213946 213950 TGGCGTAGCCGCTGA CATC GGT GATG TTCTTTTCATTTTTC staB 216648 - 215914 - | putative chaperone protein EcpD staA 217411 - 216827 - | putative fimbrial protein folK 218285 - 217806 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 219700 - 218282 - | poly(A) polymerase I TERM 254 218667 - 218682 + g 80 -4.6 -5.02476 | overlap 218668 TCGTAATAGGCAAGG CCGCTC TCCT GAGCGA TTTTTTGCGCCATCT yadB 220737 - 219841 - | glutamyl-Q tRNA(Asp) synthetase TERM 255 220776 - 220759 - R 95 -12.7 -4.21772 | opp_overlap 220759 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT TERM 256 220759 - 220776 + r 79 -12.7 -2.80935 | opp_overlap 220759 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT dksA 221261 - 220806 - | DnaK transcriptional regulator DksA sfsA 222142 - 221438 - | sugar fermentation stimulation protein A TERM 257 221852 - 221869 + g 83 -9.9 -4.09321 | overlap 221837 221836 CGCCAGCGCCGGCAG GCGATTC TCCT GAATCGC TTCTTTCGTTAGCTG ligT 222689 - 222159 - | 2'-5' RNA ligase TERM 258 222827 - 222817 - g 71 -4.6 -4.61231 | opp_overlap 222817 222817 TGACAGCCCTAAAAA CCGC GCC GCAG GTTTTGTTGTCCGCG TERM 259 223375 - 223356 - g 72 -11.4 -3.14132 | TTGCGTTTTGATGAA GCCGTCGC GATG GCGACAGC GGAACTGCTGCGCAA hrpB 222717 - 225191 + | ATP-dependent RNA helicase HrpB TERM 260 225406 - 225426 + G 70 -9.7 -3.44527 | ACAAAAGGTGAGCCG TCGTCGGCA GCA TGACGACGA TTATGATGATGACTA TERM 261 226008 - 226023 + G 83 -10.4 -4.04206 | TCGATACGCTGTTGG CGACGG AAGA CCGTCG TTTCTATGAGCATGA TERM 262 226503 - 226535 + G 71 -8.2 -3.90744 | overlap 226518 226522 226526 ATGACATGCTGAGCG CGCGTCCGCTTGGC GTACA GCCGCGCGGCGGCG TTATTTCACCGCAGC TERM 263 226842 - 226864 + G 79 -12.7 -2.87881 | opp_overlap 226857, overlap 226829 CACGCCGTTCCATCG GGTCGCTGG CGAAA CCGGCGACC TATCTGACCGCGTTA TERM 264 227459 - 227431 - g 77 -8.2 -4.17309 | gap 1, overlap 227425 227432 GACGACAAACAACAA TGTCGATACCTGG TTTG CC-GGTATCGACG GCAGCCAGGTGACTA TERM 265 227458 - 227432 - g 76 -11.7 -3.09301 | gap 1, overlap 227425 227431 ACGACAAACAACAAT GTCGATACCTGG TTTG CC-GGTATCGAC GGCAGCCAGGTGACT mrcB 225332 - 227854 + | penicillin-binding protein 1b TERM 266 228392 - 228382 - f 73 -2.4 -5.09895 | opp_overlap 228382 CATCTATCGAAAAAA CGCC ACA GTCG GTTTCGGTGGTCACT TERM 267 229017 - 228997 - f 73 -9.7 -3.34398 | overlap 228995 CTGGCTGCCGAAAGA GGGAACGGT TGA ACCGTTACC GAATGGTAAACGCTT TERM 268 229093 - 229066 - f 71 -7.8 -3.90922 | gap 1 AGGGGCGTCAAACAA CACC-TATTCTCG TAA CGAGAAAATGGTG GGATACAGTTTCGAG TERM 269 230347 - 230368 + F 100 -13.7 -4.1466 | overlap 230348 TTTCTAATTTCTTTT TGGGCACGG CTTG CCGTGCCCG TTTTACAAGTTGGCT TERM 270 230348 - 230367 + F 93 -15 -3.08314 | overlap 230347 TTCTAATTTCTTTTT GGGCACGG CTTG CCGTGCCC GTTTTACAAGTTGGC TERM 271 230428 - 230439 + G 71 -5.8 -4.34402 | overlap 230424 230424 TACCACCTTTGCGCT GCGA AGCG TCGC TTTTCGTGTGCCGGG TERM 272 231149 - 231171 + G 70 -3.2 -4.6955 | overlap 231153 GGTATCCTTCCGCAT CCGGCGGGCG CCG CGCCTGTGAG TTTTGTGTATTAATG fhuC 230387 - 231184 + | iron-hydroxamate transporter ATP-binding subunit TERM 273 231538 - 231520 - g 82 -11.6 -3.85698 | opp_overlap 231525 231526 231529 CCCTCGCCGGAGAAA CTGGCGCG GAT CGCGCCGG GGCGCGGGTTCGATT TERM 274 231897 - 231877 - g 71 -8.3 -3.91897 | opp_overlap 231880, overlap 231880 CTGGCGATGTATAAA GAAGCGGAT GTG ATCTGCTTC GATCACGGGAATAGC fhuD 231184 - 232074 + | iron-hydroxamate transporter substrate-binding subunit TERM 275 232159 - 232112 - g 89 -9.2 -4.56597 | opp_overlap 232111 232112 232147, overlap 232156 232157 TGGCGGTGCGAAAAA CGCCTTAACCGACCTACG GTTCGGGCGCTT TGTAGGCCGGATAAGGCG AAGCCGCCATCCGGC TERM 276 232483 - 232536 + G 83 -15.2 -2.74523 | overlap 232481 TTTGGGCGATTCCCG GCGCGCTGACCACGCAGTTTGCCG CCCTGA CGGGAGCCTGCATCGTCGGCGCGC TGGTGTTCGGCGTGG TERM 277 232748 - 232760 + G 74 -7.7 -4.10566 | GCAGTTGCTGGGCGG CGTGA TGC TCACG TTATTGTTGTTACGT TERM 278 232983 - 233001 + G 77 -7.3 -4.33785 | overlap 232968 GCGCGCCTGATGCTG GCGCCGC TCATT GGGGCGC TTATTTTATGGCTAT TERM 279 233548 - 233563 + G 86 -11.8 -3.85698 | opp_overlap 233547, overlap 233549 TGATTATTATGATAG CCGCCG GGCG CGGCGG TTTCTCGCCGCAACG fhuB 232071 - 234128 + | iron-hydroxamate transporter permease subunit hemL 235499 - 234219 - | glutamate-1-semialdehyde aminotransferase TERM 280 234368 - 234358 - G 70 -6.8 -4.1711 | overlap 234329 234366 ATCAGGTGGAAGAAA CGCT TAA AGCG TTCCACGTCGCACGC TERM 281 235868 - 235893 + G 76 -3.3 -4.98531 | gap 1, opp_overlap 235856 235854, overlap 235857 235876 235877 ACATGCGCATTGGCG CGC-TGGTTC AGGTCGC GGACCATGCG TTTTTGCTTTGGCCG TERM 282 235904 - 235914 + G 77 -8.2 -4.13654 | ATGCGTTTTTGCTTT GGCC GCT GGCC TTTATCCTTTCGGCG yadQ 235669 - 237090 + | chloride channel protein TERM 283 237378 - 237364 - g 76 -5.6 -4.68994 | opp_overlap 237364 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGACCCGATG yadR 237127 - 237516 + | iron-sulfur cluster insertion protein ErpA yadS 238240 - 237617 - | hypothetical protein btuF 239077 - 238277 - | vitamin B12-transporter protein BtuF TERM 284 238881 - 238894 + g 70 -6.7 -4.18465 | AGATTCATTCCCTGC CAGGT AGAG ACCTG TTCTATTTTTTGCGC TERM 285 239061 - 239041 - G 76 -12.5 -2.73364 | opp_overlap 239041 239040 CCGGGAGCGTAAGCA GCAGGGCGC CCA GCGCCCTGA ACATTTGCTTAGCCA mtn 239768 - 239070 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 286 239812 - 239831 + H 71 -7.9 -3.85698 | GGGCATAGTTTATCA TGCGCTT ATGGGG AAGCGCA TTTCTCAGGCGGGGA TERM 287 240022 - 240007 - g 78 -2.4 -5.14563 | overlap 240008 GTTTGCAGCAAAAAA CGCAGG TTTT CCCGCT GGAGCGCAATGCCGC dgt 239853 - 241370 + | deoxyguanosinetriphosphate triphosphohydrolase htrA 241500 - 242927 + | serine endoprotease yaeG 243080 - 244237 + | carbohydrate diacid transcriptional activator CdaR yaeH 244712 - 244326 - | hypothetical protein TERM 288 245059 - 245079 + r 79 -3.1 -5.44119 | opp_overlap 245048 TATACGGCTTAGCAA GCGCGCTGG TAT TTGGCCCGC TTTTTTTCCCCTGGC TERM 289 246285 - 246268 - R 72 -8.3 -3.75153 | opp_overlap 246268 246268, overlap 246269 TCGCCGTAATGCAAA GGGGGGC TGTC GCCCCCG CTTTTCACTCGCTTA TERM 290 246268 - 246286 + r 79 -8.1 -4.21275 | gap 1, opp_overlap 246268 246269, overlap 246268 TCGCCGTAATGCAAA G-GGGGGC TGTC GCCCCCGC TTTTCACTCGCTTAA TERM 291 246284 - 246269 - R 77 -11.8 -2.84878 | opp_overlap 246268 246268, overlap 246268 CGCCGTAATGCAAAG GGGGGC TGTC GCCCCC GCTTTTCACTCGCTT dapD 247122 - 246298 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase glnD 249824 - 247152 - | PII uridylyl-transferase TERM 292 249146 - 249163 + g 74 -6.9 -4.3467 | ATGTATGGATATCGC GCAGGCC GCCG GGGCTGC TTTTAATATCCGGCT TERM 293 249874 - 249844 - R 84 -7.5 -4.7497 | gap 1, opp_overlap 249854 GCCACCCATTAAAAA GCCGGATGGTGGCG TGAA CGCCTT-ATCCGGC CTACGAAGTAGTACA map 250731 - 249937 - | methionine aminopeptidase TERM 294 250681 - 250691 + g 78 -2.4 -5.15381 | overlap 250678 GGCTGCCAGACGGCC CGCG ACG CGCA TTTTTTCGATGTCTT rpsB 251181 - 251906 + | 30S ribosomal protein S2 TERM 295 251899 - 251887 - f 73 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC CGAGTAATAAGGCTT TERM 296 251998 - 251965 - f 73 -9.5 -3.33261 | overlap 251966 CGGCAAGCTCGAGAA TTCCCGGGCGCTTAC ATCA GTAAGTGTCCGGGAT GAGCGAGTGAAGGCA TERM 297 251997 - 251966 - f 81 -13 -2.59742 | overlap 251965 GGCAAGCTCGAGAAT TCCCGGGCGCTTAC ATCA GTAAGTGTCCGGGA TGAGCGAGTGAAGGC TERM 298 252080 - 252100 + F 100 -11.1 -4.89729 | overlap 252078 TATCACGTTTGGTTA GGGGGCC TGTATAT GGCCCCC TTTTTCACTTTTATA TERM 299 252336 - 252320 - g 86 -6.5 -5.03747 | AAAGCGGCGAAAAAA GCAGGCA ACG TGGCTGC TGACGGCGTAATCAA TERM 300 252375 - 252360 - g 74 -4.6 -4.72729 | opp_overlap 252360 252361, overlap 252361 TAATCAAAACCAAAA TCGACG GTAA CGTCGC TTTCATTCTGGAAGT tsf 252164 - 253015 + | elongation factor Ts TERM 301 253025 - 253046 + F 100 -13.7 -4.61633 | TCCTGATTTTCCTGA GGAGCCGCC TGAG GGCGGCTTC TTTTTGCGCCTCTCT TERM 302 253095 - 253069 - f 76 -8.1 -4.07568 | gap 2, overlap 253072 GCCTCTCTTGTAAAA TCAGC-C-GACGC CTG GCGTCTGCGCTGA AATGCGACGTACAAT TERM 303 253090 - 253072 - f 73 -10.2 -3.08032 | overlap 253069 TCTCTTGTAAAATCA GCCGACGC CTG GCGTCTGC GCTGAAATGCGACGT pyrH 253160 - 253885 + | uridylate kinase frr 254032 - 254589 + | ribosome recycling factor TERM 304 254589 - 254569 - f 76 -8.3 -4.14627 | opp_overlap 254569 254570 254572, overlap 254570 254572 TTGGCAGATAAAGAA GCAGAACTG ATG CAGTTCTGA TTGATCTGTACGCAG TERM 305 254588 - 254570 - f 78 -11.8 -3.08294 | opp_overlap 254569 254570 254572, overlap 254569 254572 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 306 254570 - 254588 + F 76 -11.8 -2.58999 | opp_overlap 254570 254569 254572, overlap 254569 254572 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 307 254648 - 254697 + F 100 -16.5 -5.16151 | opp_overlap 254653 254654, overlap 254649 GCGGATGAGTGGTGT ACAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTGC TTTTTATTCCGTTTC TERM 308 254649 - 254696 + F 100 -20 -3.68064 | opp_overlap 254653 254654, overlap 254648 CGGATGAGTGGTGTA CAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTG CTTTTTATTCCGTTT TERM 309 254692 - 254653 - f 95 -12.8 -3.86346 | opp_overlap 254649 254648, overlap 254654 TGAGTGGTGTACAAA GCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGT TTTGCTTTTTATTCC TERM 310 254691 - 254654 - f 93 -16.3 -2.91593 | opp_overlap 254649 254648, overlap 254653 GAGTGGTGTACAAAG CGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCG TTTTGCTTTTTATTC dxr 254731 - 255927 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 311 255995 - 256006 + F 80 -5.8 -4.95854 | overlap 255987 ATATAGTCTGCGCCA CCTG ATCG CAGG TTTTTGGCTTTTTTC TERM 312 256032 - 256049 + F 100 -8.4 -5.28176 | TTTTCGGTCAGGTTA GCCGTG GTTTTA CACGGC TTTTTTGTGGATACA STY0244 256240 - 256998 + | undecaprenyl pyrophosphate synthase cdsA 257011 - 257868 + | CDP-diglyceride synthase TERM 313 258169 - 258157 - g 74 -3.3 -4.89477 | opp_overlap 258166 CCTTCAATAACAAAA CGGTG GGC CAGCG CGCCGCAATTATTGC yaeL 257880 - 259232 + | zinc metallopeptidase yaeT 259264 - 261675 + | outer membrane protein assembly factor YaeT TERM 314 262012 - 262000 - g 77 -7.7 -4.27584 | ATCTGCAATCTAAAA TGCAG CGT CTGCA ATCCATGAAAGCAGG TERM 315 262114 - 262089 - g 72 -3.9 -4.83169 | overlap 262107 262109 ACTTTCGCACAAAAA GCGCAGGCTTT TGAG AAAGATCGCGC TCGTCGTTCCAACGA TERM 316 262260 - 262232 - g 78 -11.8 -3.28924 | overlap 262217 262219 CACCGTTGCTTACAA CAGCAGCGATGT GAAAG ACATCACCGCTG ACGTACTGAAACAGG ompH 261798 - 262283 + | periplasmic chaperone TERM 317 262365 - 262340 - g 81 -13.3 -2.97245 | opp_overlap 262338, overlap 262335 GGATGCAGAATTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 262287 - 263312 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 318 263341 - 263377 + F 79 -9.4 -4.02005 | gap 1, overlap 263342 AGTTGCCATTCTTTT C-CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCGTG TTATTATTGCCTTTT TERM 319 263342 - 263375 + F 90 -13.1 -3.57992 | overlap 263341 GTTGCCATTCTTTTC CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCG TGTTATTATTGCCTT fabZ 263418 - 263873 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 320 263937 - 263960 + G 72 -3.8 -4.79752 | overlap 263941 GACGGCGCTGTAATT GGCGCTAATG CCCA CATTGGTCCC TTTTGTATTGTTGGG TERM 321 264302 - 264290 - g 70 -9.1 -3.61715 | TATCCTCGCCAACAA CGCCA CGC TGGCG GGGCACGTATCAGTC lpxA 263877 - 264665 + | UDP-N-acetylglucosamine acyltransferase TERM 322 264756 - 264774 + G 73 -5.9 -4.4017 | opp_overlap 264756 264755 264769 TTCGTGCGCTGAAAG CGCGCGT ACCCA ACGCCCG TTTTGTGGGCGTTGC TERM 323 265211 - 265201 - g 72 -2.4 -4.84359 | opp_overlap 265206 265207, overlap 265203 GGACCCGGATAAAAA TGCG GCG CGCG ACGTGCTGGGTATCC TERM 324 265704 - 265673 - g 71 -4.4 -4.66833 | gap 1, overlap 265674 TGCGAACCGCAAAAA CTCGCC-GAAGCG CTGTTGC CGCTACTGGCGAA CGGTAAAACCAGCCA lpxB 264665 - 265813 + | lipid-A-disaccharide synthase rnhB 265810 - 266406 + | ribonuclease HII dnaE 266430 - 269912 + | DNA polymerase III subunit alpha TERM 325 270078 - 270064 - g 76 -2.8 -5.00616 | overlap 270076 GCCTGCGCGAAAAAA GCGT AGAACTG ACGC GCAAAATCTTCGCCG accA 269925 - 270884 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 326 270907 - 270927 + F 100 -16.9 -5.4251 | CCTCATTTCTCCCAG GAGGCCGGA TAA TCCGGCCTC TTTTTTGTCTATGGA TERM 327 270962 - 270946 - f 100 -13.7 -4.18018 | TTTGTCTATGGAAAA CCCCAGC TAG GCTGGGG GTTCCGGAAAGCTTT tnpA 271076 - 271534 + | transposase for insertion sequence element IS200 TERM 328 271613 - 271637 + F 93 -9.9 -4.64861 | opp_overlap 271616, overlap 271615 271616 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTGGACGAG TERM 329 271615 - 271635 + F 95 -12.5 -3.93868 | opp_overlap 271616, overlap 271613 271616 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTGGACG TERM 330 271616 - 271634 + F 93 -16 -2.95598 | opp_overlap 271616, overlap 271615 271613 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGGAC TERM 331 271634 - 271616 - f 100 -16 -4.91109 | opp_overlap 271615 271613 271616 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGGAC TERM 332 271809 - 271790 - g 84 -6.4 -5.0538 | gap 1, overlap 271792 271793 TGGGATTGCAAAAAA CACTGGCGC TCA GCGCC-GTA GCGGCAGGGATCATG TERM 333 271807 - 271792 - g 70 -6.8 -4.15748 | gap 1, overlap 271790 271793 GGATTGCAAAAAACA CTGGCGC TCA GCGCC-G TAGCGGCAGGGATCA TERM 334 271902 - 271887 - g 71 -10.4 -3.25015 | GCCAATGACCATTAA CGCCAG CGAT CTGGCG GCGAAAGAGAAAGCG TERM 335 272399 - 272425 + G 81 -8 -4.33417 | ACGGCGATTTCCTCA GCTATTTTGGCC GCG GGGCAAAACAGC TTTCTTATAACTACA STY0257 271774 - 273537 + | putative secreted chitinase TERM 336 273573 - 273547 - f 90 -10.8 -4.34263 | opp_overlap 273547 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 337 273547 - 273573 + F 100 -15.2 -3.79849 | opp_overlap 273547 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 338 273756 - 273778 + G 71 -4.9 -4.66609 | gap 1, opp_overlap 273756 273760, overlap 273760 GAAGTTTATTGAACA TAAC-CCGCG CATC TGCGGCGTTA TTTTTGACTGGGATG TERM 339 274401 - 274422 + G 72 -12.3 -2.58427 | gap 1, overlap 274400 274402 GCCTCTCTGGTTGAA GCCGACGCGC AAT GCGC-TCGGC ATTCTCGGCGGTATT TERM 340 275334 - 275348 + G 77 -4.2 -4.84761 | overlap 275323 GTTGCCGGATCTGTA TGCGGA AGA TCCGGA TTTTTATCGCAATAT TERM 341 275619 - 275633 + G 79 -7.8 -4.49311 | opp_overlap 275618 GATCACGCAACAGAG TCGGGC CGT GCTCGA TTTTCTGCTGATGCT ldcC 273613 - 275754 + | lysine decarboxylase STY0260 275810 - 276199 + | hypothetical protein TERM 342 277434 - 277403 - g 77 -3.7 -5.04868 | gap 2, opp_overlap 277429 277431, overlap 277405 GTAAATTAAAGAAAA TCTGGCAGGAGCAGG GGAT CCCGC-CCTGGC-GA CGAGACACCACGCCG tilS 276262 - 277554 + | tRNA(Ile)-lysidine synthetase TERM 343 277564 - 277607 + T 81 -13.2 -2.71011 | opp_overlap 277596 277606 GCCTGATGGCGCTGC GCTTATCAGGCCTACGTATC GCAT GGAACGTAGGCCGGATAAGG TGCTTGCACCACCAT rof 277892 - 277638 - | Rho-binding antiterminator yaeP 278103 - 277885 - | hypothetical protein TERM 344 277921 - 277936 + g 86 -10.4 -4.18018 | CACCAGTAAGTTCGC GGCAGC ATAA GCTGCC TTTTCCCTGACCGAC TERM 345 278578 - 278565 - g 81 -8.1 -4.24342 | CGCCGTATTAAGAAA GCCTG TACT CAGGC GAGCGACGTCGCGCT yaeQ 278283 - 278828 + | hypothetical protein yaeJ 278825 - 279247 + | hypothetical protein cutF 279279 - 279980 + | lipoprotein involved with copper homeostasis and adhesion TERM 346 280009 - 279985 - T 87 -9.9 -4.258 | opp_overlap 279988, overlap 279987 279988 GCACTCACTAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 347 280007 - 279987 - T 93 -12.5 -3.72775 | opp_overlap 279988, overlap 279985 279988 ACTCACTAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 348 279988 - 280006 + T 100 -16 -4.91109 | opp_overlap 279987 279985 279988 CTCACTAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 349 280006 - 279988 - T 93 -16 -2.82942 | opp_overlap 279988, overlap 279987 279985 CTCACTAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 280546 - 280088 - | transposase for insertion sequence element IS200 TERM 350 280659 - 280677 + r 100 -16 -4.18197 | opp_overlap 280649 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAT TERM 351 280697 - 280717 + r 100 -16.9 -3.74077 | opp_overlap 280697 CCATAGACAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG TERM 352 280717 - 280697 - R 100 -16.9 -4.87592 | opp_overlap 280697 CCATAGACAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG proS 282483 - 280765 - | prolyl-tRNA synthetase TERM 353 280802 - 280821 + g 71 -4.2 -4.58395 | opp_overlap 280794 280802 280818 AGATAATCAACGATA TCGCCGGT TTTA ATCAGCGA TTTTTCACCGCTACG TERM 354 282531 - 282513 - R 83 -13.2 -3.13343 | AGTTGAACGATCGAA CAGGCTCA ATG TGAGCCTG ATACAAAAAAAGTGA yaeB 283301 - 282594 - | hypothetical protein TERM 355 283072 - 283040 - G 91 -9.8 -4.56775 | gap 1, overlap 283066 AGCGCGTGGCAAAAA CGCCCATTC-TGGCG TTAC CGCCAAGACGGGGCG GACGAACTGTTGGCC rcsF 283702 - 283298 - | outer membrane lipoprotein TERM 356 283786 - 283763 - R 88 -14.6 -3.01125 | opp_overlap 283761, overlap 283760 283766 AGCTTGCATAAATGA CAAGACGGGC AATA GCCCGTCCTG AATAATATTACAGAT TERM 357 283783 - 283766 - R 88 -12.7 -3.64915 | opp_overlap 283761, overlap 283763 283760 TTGCATAAATGACAA GACGGGC AATA GCCCGTC CTGAATAATATTACA metQ 284636 - 283821 - | DL-methionine transporter substrate-binding subunit yaeE 285313 - 284675 - | DL-methionine transporter permease subunit TERM 358 285034 - 285024 - G 83 -8.2 -4.38154 | ATACGGGCGATAAAA GGCG CGG CGCC GACGGTCAGCGGTAC metN 286352 - 285321 - | DL-methionine transporter ATP-binding subunit TERM 359 285642 - 285652 + g 77 -8.2 -4.13767 | CTGAATAAACTTCTG CGCC AGC GGCG TTTTAGGATGCGAGA yaeD 286542 - 287108 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 360 287266 - 287252 - f 76 -4.2 -5.0916 | opp_overlap 287252, overlap 287253 287260 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 361 287298 - 287286 - f 71 -7.7 -4.00532 | overlap 287296 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACGGTG TERM 362 289217 - 289252 + F 77 -9.2 -4.00532 | opp_overlap 289228 AGGCGTTGCCATCAG TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA TTTGCTCTTTAAAAA TERM 363 289316 - 289292 - f 71 -8 -3.93061 | gap 1, opp_overlap 289292 289299, overlap 289296 289302 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 364 289870 - 289858 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 365 289922 - 289904 - f 70 -8.8 -3.35798 | overlap 289907 ACCGTGTACGTACAA GCAGTGGG AGC CCCACCAC TAAGCCAGTGGTGAA TERM 366 292763 - 292738 - f 83 -13.3 -3.18264 | opp_overlap 292740, overlap 292740 TCCGCCACTTATTAA GAGCCCTGAGC ATTA GCTCAGGGCTT TTTCTTTGCCTGCGA TERM 367 292740 - 292761 + F 100 -15.9 -5.30616 | opp_overlap 292738 292740 CGCCACTTATTAAGA GCCCTGAGC ATTA GCTCAGGGC TTTTTCTTTGCCTGC TERM 368 292761 - 292740 - f 100 -15.9 -3.1552 | opp_overlap 292740, overlap 292738 CGCCACTTATTAAGA GCCCTGAGC ATTA GCTCAGGGC TTTTTCTTTGCCTGC TERM 369 293599 - 293574 - g 77 -8.3 -4.10161 | gap 1 CACCAGGCGTGAAAA CCTG-GCAAGCA ACC TGCTGGCGCAGG ATCTGCATCTGGATG dkgB 292894 - 293697 + | 2,5-diketo-D-gluconate reductase B TERM 370 293732 - 293749 + T 77 -9.1 -3.97043 | TTTACCCCTCTTTCA CAGCTCC TGCG GGGGCTG TTCTTATATATTCGC yafC 294632 - 293718 - | transcriptional regulator STY0278 294737 - 295912 + | putative drug efflux protein TERM 371 296014 - 295995 - f 77 -9.3 -4.00486 | opp_overlap 295998 CCTATAACAGAAGAA CCAGTCC GGTTGA GGACTGG TTGACGTTACAGAGG yafD 296065 - 296844 + | hypothetical protein yafE 296922 - 297692 + | putative methyltransferase TERM 372 297696 - 297730 + T 84 -8.6 -4.72272 | opp_overlap 297703, overlap 297697 297698 297703 AAAGCGGTATAACAA TTTAAAAGGCGCCG GGGGAAG CGGCGCCTTTTGGC TTTTTCGTCGGACAA TERM 373 297697 - 297729 + T 82 -12.1 -3.43042 | opp_overlap 297703, overlap 297696 297698 297703 AAGCGGTATAACAAT TTAAAAGGCGCCG GGGGAAG CGGCGCCTTTTGG CTTTTTCGTCGGACA TERM 374 297698 - 297728 + T 81 -13.4 -2.65504 | opp_overlap 297703, overlap 297697 297696 297703 AGCGGTATAACAATT TAAAAGGCGCCG GGGGAAG CGGCGCCTTTTG GCTTTTTCGTCGGAC TERM 375 297703 - 297723 + T 95 -11.1 -4.49644 | opp_overlap 297703, overlap 297698 297697 297696 TATAACAATTTAAAA GGCGCCG GGGGAAG CGGCGCC TTTTGGCTTTTTCGT TERM 376 297723 - 297703 - T 95 -11.1 -4.37734 | opp_overlap 297698 297697 297696 297703 TATAACAATTTAAAA GGCGCCG GGGGAAG CGGCGCC TTTTGGCTTTTTCGT mltD 299115 - 297748 - | membrane-bound lytic murein transglycosylase D TERM 377 298325 - 298376 + g 71 -7.2 -3.9318 | gap 1, overlap 298321 298330 298351 298374 TTTAAACGAACTCGT GCCAGCGCT-CGGCTTTCATCTGTT GTT GGCAGACGTACGCCGTAGCGTTTGC TGTTTTTGAGAATTT TERM 378 298330 - 298371 + g 70 -6.5 -4.13748 | gap 1, overlap 298321 298325 298351 ACGAACTCGTGCCAG CGCT-CGGCTTTCATCTGTT GTT GGCAGACGTACGCCGTAGCG TTTGCTGTTTTTGAG TERM 379 298351 - 298378 + g 71 -4.2 -4.64657 | gap 1, overlap 298330 298325 298374 GCTTTCATCTGTTGT TGGCAGACG-TAC GCC GTAGCGTTTGCTG TTTTTGAGAATTTCA gloB 299942 - 299187 - | hydroxyacylglutathione hydrolase TERM 380 300588 - 300613 + G 78 -11.9 -3.16564 | ACAGCTTATTGTGGC CCGTAAGCGGA CCAT TCCGCTTACGC TTAATCCGCTGCGAC STY0283 299977 - 300699 + | hypothetical protein rnhA 301163 - 300696 - | ribonuclease H dnaQ 301227 - 301958 + | DNA polymerase III subunit epsilon TERM 381 302052 - 302033 - T 71 -3.4 -4.90296 | overlap 302035 AAAAGGTGAGAAAAA GCGTTGAC GGGC GACACCGC AAACCGTAATATTCG TERM 382 302239 - 302215 - T 100 -8.6 -5.63103 | opp_overlap 302215 TGTGAAGTAAAAAAA CCGTATCACT GTAAA AGGGATACGG TTTTTTTTCGTCTTC TERM 383 302215 - 302239 + T 100 -8.6 -5.94597 | opp_overlap 302215 TGTGAAGTAAAAAAA CCGTATCACT GTAAA AGGGATACGG TTTTTTTTCGTCTTC STY0286 303120 - 302488 - | hypothetical protein TERM 384 302887 - 302876 - G 71 -4.4 -4.58395 | CGCAGGCGTGAAAAA TCTG GAGC CAGA TCGCCTAATGTCTCA STY0287 303542 - 303120 - | hypothetical protein STY0288 304548 - 303553 - | hypothetical protein STY0289 306428 - 304545 - | hypothetical protein STY0290 306938 - 306444 - | hypothetical protein TERM 385 306745 - 306687 - G 80 -9.4 -4.12532 | gap 1, overlap 306688 GTGCTCATACATAAA GCTGCCCGCCAGCGGCGGCAGGCCATA GTTGAG CACTGAC-GCCGCCGCCTGCGGATAGC GCCGGGCGTCGATGT STY0291 307759 - 306935 - | hypothetical protein STY0292 308648 - 307746 - | hypothetical protein STY0293 308728 - 308657 - | hypothetical protein TERM 386 308730 - 308752 + H 100 -8.4 -5.4593 | opp_overlap 308728 TTAACTAAATTCATA GGGAGTCATT ATT GATGACACCC TTTTTATTATTTTCG TERM 387 308805 - 308817 + H 70 -4.9 -4.53636 | ATAGATGTCTTTTTT GAAAT ATT ATTTC TTTTAATTCTGTAAT TERM 388 311613 - 311587 - g 81 -6.6 -4.68593 | opp_overlap 311586 311587 GCCATGACGGAAAAA GCCGCTATCA GGCAGAT TGATATCGGC GTTAATGGTGATGAG STY0294 309016 - 311679 + | ClpB-like protein STY0295 311664 - 311762 + | hypothetical protein TERM 389 312041 - 312016 - g 74 -2.6 -5.06089 | AAAGTACAAAGAAAA CAAAGAGATT ATAAAA AAACTCTCTG AGTATGATTTTTAAA STY0296 311765 - 312055 + | hypothetical protein STY0297 312119 - 312661 + | hypothetical protein TERM 390 314306 - 314293 - gf 71 -4.5 -4.63586 | overlap 314303 ACAGGATACAGAAAA GGTAG GAAA CCACC ATCAGTGTGTTGAAC STY0300 314246 - 314647 + | hypothetical protein STY0301 314619 - 315044 + | hypothetical protein STY0302 315281 - 315766 + | hypothetical protein TERM 391 315777 - 315802 + F 100 -17.7 -4.71463 | TTTAACGGCTGTTTT TCCGGCCAGAT TTAT ATCTGGCCGGA TTTATTGTTTTGATT TERM 392 316174 - 316160 - g 89 -2.7 -5.47159 | GGCGAAGAGAAAAAA CTGCG TCGCC CGCTG AATGCGCAGACCACG TERM 393 316270 - 316254 - g 75 -6.5 -4.4715 | overlap 316256 GGGTAACCTACAAAA TCCCGGA AGC CCCGGAA AAAGCCTGGTACAGC STY0303 315833 - 316369 + | lipoprotein STY0304 316373 - 317716 + | hypothetical protein TERM 394 317745 - 317757 + G 86 -7.7 -4.82901 | overlap 317732 GACGCCGCCAGCGGC GGACA TGA TGTCC TTTTTGTCCACCACG TERM 395 318768 - 318748 - g 71 -6.1 -4.258 | gap 1, overlap 318749 318761 318762 CCAGTGATTAACAAA GCGGCGCG GGAAAT CGC-CCGC GTGGGCGGCGCAGTC STY0305 317713 - 319014 + | hypothetical protein TERM 396 319474 - 319456 - g 70 -3 -4.68994 | overlap 319457 319458 AGCATTAGTTAAAAA TTTCCCCT GTC AGGGGACT GAACCCTCCGTAAAA STY0306 319019 - 319768 + | hypothetical protein STY0307 319800 - 320294 + | hypothetical protein TERM 397 320388 - 320413 + F 73 -4.1 -4.76802 | gap 1, opp_overlap 320377, overlap 320381 AACACACGTTCAGGG TCCGTGAAGT ATTTTTG ACTTC-CGGA TTTATTATTTTTCAA TERM 398 321333 - 321315 - f 70 -10.2 -2.52543 | ACGGCGGCGAAGCGA GCGCCGCG CAG CGCAACGC CGGAGAGTGGCAGGG TERM 399 321467 - 321429 - f 78 -11.7 -3.06915 | gap 2, overlap 321419 321416 ACGTAGCGGATTTAA CCGCACA-GCCACC-GGCG GAA CGCCTGGCGGCCTGCGCCG CTCTGCGGGCGCGAC TERM 400 321636 - 321607 - f 72 -10.7 -2.91276 | overlap 321606 TCTTCGCGCACAAAT CTGGGGCTTTACG TTGC CGTACAGCCGCAG GCGAAAAACGGGCGA TERM 401 321675 - 321645 - f 95 -11 -4.62069 | overlap 321647 GCCGCAGGCGAAAAA CGGGCGACCCGCAG GCG CTGCATGCCGCCTG CGCGCAGGAGCTGGC TERM 402 321673 - 321647 - f 78 -12.2 -2.61831 | overlap 321645 CGCAGGCGAAAAACG GGCGACCCGCAG GCG CTGCATGCCGCC TGCGCGCAGGAGCTG TERM 403 321767 - 321756 - f 71 -7.2 -4.15833 | opp_overlap 321756, overlap 321745 321757 AGTACGACCTTAAAA GCCG CCAG CGGC TGTATACCTTCCCGC TERM 404 321984 - 321972 - f 71 -3.3 -4.82901 | opp_overlap 321980, overlap 321973 TCCGGGCGATAAAAA CCACC CGT GGCGA ATCATCCGCCTCTCT TERM 405 322882 - 322911 + F 70 -9.9 -2.94422 | gap 1, opp_overlap 322883, overlap 322881 322877 TGTTTGTGCGTAGCA ACGGCGCGCCGCTG GAT CGG-GGCGTGCCGG GTATTTTTACCCGTG TERM 406 322910 - 322883 - f 71 -9.7 -3.14132 | opp_overlap 322882 322881 322877 GTTTGTGCGTAGCAA CGGCGCGCCGC TGGATC GGGGCGTGCCG GGTATTTTTACCCGT TERM 407 323033 - 323021 - f 78 -4.8 -5.06451 | overlap 323022 GAGTACGCCAAAAAA GCTG ACTGA CAGC CTGCGCAGCCAGATA TERM 408 323541 - 323574 + F 100 -18.1 -3.14132 | CTGGCCATTGCTGAC AGCGCGCTGGCGGCG GGGA CGTTGCCAGCGCGCA TTACTGCCGCAGACA TERM 409 323688 - 323675 - f 79 -9.5 -3.68023 | opp_overlap 323674, overlap 323671 AACGCGCAAAATCAA CGCCG GGAC CGGCG ATGTGCTCAACACCC TERM 410 323882 - 323850 - f 84 -10.6 -4.00042 | gap 2, overlap 323851 TTCTGGAGCAAACAA CTGGCTCCGCTGGCGG ACA CCGCCAGC-GACCC-G TGGCGCTACAAACCG TERM 411 323882 - 323851 - f 73 -10.8 -2.99704 | gap 1, overlap 323850 TCTGGAGCAAACAAC TGGCTCCGCTGGCGG ACA CCGCCAGC-GACCCG TGGCGCTACAAACCG STY0310 324392 - 325159 + | hypothetical protein TERM 412 325442 - 325467 + G 100 -10.5 -5.15969 | opp_overlap 325441 CCTCAGGGAAGTCAC GACGTGTGGGT TGCC ACCTATACGTC TTTTTTAAATTGCGC STY0311 325202 - 325672 + | hypothetical protein TERM 413 326087 - 326069 - g 89 -3.1 -5.73672 | AAATAATGAAAAAAA CTGGC GCGACATTT GCCAG TGAAGTGGTGCAACG STY0312 325657 - 326130 + | hypothetical protein STY0313 326234 - 326704 + | hypothetical protein TERM 414 326858 - 326869 + G 77 -3.6 -5.07486 | AAAAATATGATTTAT CGCT GGAT GGCG TTTTTGTTGACGGTG TERM 415 327107 - 327089 - g 89 -3.1 -5.73672 | AAATAATGAAAAAAA CTGGC GCGACATTT GCCAG TGAAGTGGTACAGCG STY0314 326689 - 327150 + | hypothetical protein STY0316 327278 - 327694 + | hypothetical protein STY0317 327721 - 328158 + | hypothetical protein STY0318 328166 - 328273 + | hypothetical protein TERM 416 328865 - 328831 - g 95 -14.2 -3.56092 | TCAGGACTGGTGAAA GCCGCGGTGGCAGC GGCGCAG GCTGCCGCCGCTGC AGGTATGGCGCAGGA TERM 417 330158 - 330147 - g 71 -5.8 -4.34771 | CAAAATGGATGAAAA CAGC TCCT GCTG GATACGCGTCAGCTA TERM 418 330267 - 330249 - g 73 -5.3 -4.62069 | gap 1 GGTGGATTTCAAAAA CGGC-GAT CCGG ATCTGCCG ATCATCGTGGGGCGT STY0319 328636 - 330825 + | Rhs-family protein STY0320 330849 - 331295 + | hypothetical protein TERM 419 331311 - 331296 - f 73 -7.6 -4.0498 | GATAAAAACGAATAA TCACAC GGAG GTGTGA CCATGTATGAAGCAG TERM 420 332049 - 332071 + G 71 -4.6 -4.56597 | TTCACCCTGCCCGGT CGCCTGCCGG TCA CCTGCTCGCG TTTTTACGCCAGCCA TERM 421 333491 - 333479 - g 73 -10.5 -3.44527 | CACGGATGAGGAGAA GCGCG AGA CGCGC TGGCAGTACACGCCG STY0321 331314 - 335378 + | Rhs-family protein TERM 422 335409 - 335397 - g 100 -4.9 -5.88197 | overlap 335402 TGAAATATAAAAAAA TAAGA GTA TCTTA TGATACCGAAGTTAC STY0322 335381 - 336058 + | hypothetical protein STY0323 336077 - 336370 + | hypothetical protein TERM 423 337480 - 337451 - g 76 -12.1 -3.10344 | gap 1 GGGTGACGGAACAGA CGGAC-CCCGGCGG CAG CCGCCGGGCATACG GGTATAACGCGCTGA TERM 424 337673 - 337646 - g 71 -9.9 -3.53091 | overlap 337647 ACCGTCTGCTGGAAA TCCGCCGCA GGCGGCATGA TGCGGCGGA AGGCGGAGAGCCGGA TERM 425 338082 - 338070 - g 71 -4.7 -4.57569 | opp_overlap 338071 338079, overlap 338071 TGAGCTGCTGAAAAA GCGGC ACA GCCGG CAGGGGGTGACGGAT STY0324 336466 - 338997 + | Rhs-family protein STY0326 339076 - 339336 + | hypothetical protein TERM 426 339599 - 339618 + G 70 -2.8 -4.81306 | opp_overlap 339600 339601 339603, overlap 339601 CAAGAAAATAATATA AGCATTCC AGAT GGAATGTA TTCTTTTTTATTGCA TERM 427 339601 - 339616 + G 71 -7.6 -4.00001 | opp_overlap 339601 339600 339603, overlap 339599 AGAAAATAATATAAG CATTCC AGAT GGAATG TATTCTTTTTTATTG STY0327 339338 - 339781 + | hypothetical protein TERM 428 339794 - 339835 + T 80 -9.7 -3.9122 | gap 1, opp_overlap 339801, overlap 339801 TAATACATTAGGTGT TAATAAAGCCGGGAAAGA AATTAAC TCTT-CCCGGCTTTTTTA TTATTTAACCCCCTG TERM 429 339828 - 339801 - T 76 -8.5 -4.16016 | gap 1, opp_overlap 339794 339801 TTAGGTGTTAATAAA GCCGGGAAAGAA ATTAA CTCTT-CCCGGC TTTTTTATTATTTAA TERM 430 339801 - 339828 + T 100 -7.8 -5.72254 | gap 1, opp_overlap 339801, overlap 339794 TTAGGTGTTAATAAA GCCGGGAAAGA AATTAAC TCTT-CCCGGC TTTTTTATTATTTAA STY0328 340156 - 339851 - | hypothetical protein TERM 431 340290 - 340305 + H 77 -9 -3.85698 | ACTGTTAAAGATGTC TACCGG GAGG CCGGTA TTTCTGAAGCCACCA safA 341669 - 342163 + | lipoprotein TERM 432 342837 - 342805 - f 89 -11.5 -4.08853 | overlap 342806 CTTAATAGTAAACAA CTTTTATTGCGCTTT ATT AAAGCGCAATAAATA TCAAGTCATACATTT TERM 433 342836 - 342806 - f 80 -12.8 -3.04589 | overlap 342805 TTAATAGTAAACAAC TTTTATTGCGCTTT ATT AAAGCGCAATAAAT ATCAAGTCATACATT safB 342869 - 343609 + | periplasmic fimbrial chaperone protein safC 343633 - 346143 + | outer-membrane fimbrial usher protein TERM 434 346409 - 346395 - g 74 -7 -4.3129 | GAGCGATGAGCAAAA GGCGGG TAA CACGCC TACCGTATTGCTGCT safD 346165 - 346635 + | putative fimbrial structural subunit TERM 435 346902 - 346916 + F 71 -10 -3.28708 | opp_overlap 346914, overlap 346915 ACTCTTTTGTGAGCG GGGCTT TAT AAGCCC TTAGTATAAGGTTTG TERM 436 346915 - 346927 + F 78 -6.3 -4.65722 | opp_overlap 346914, overlap 346902 CGGGGCTTTATAAGC CCTTA GTA TAAGG TTTGTTTATCTGTCA STY0338 347043 - 347864 + | hypothetical protein sinR 348682 - 349626 + | LysR family transcriptional regulator SinR TERM 437 349701 - 349721 + F 73 -7.6 -4.11216 | gap 1, opp_overlap 349688 349684, overlap 349702 GAGGCATCGAGATAT G-CGACTGG CCGG CCAGTCGTC TTTTGACGATGCCCA TERM 438 349702 - 349719 + F 82 -11.3 -3.65542 | opp_overlap 349688 349684, overlap 349701 AGGCATCGAGATATG CGACTGG CCGG CCAGTCG TCTTTTGACGATGCC STY0342 349746 - 349859 + | hypothetical protein TERM 439 350027 - 350042 + F 77 -9 -3.85698 | ACTGTTAAAGATGTC TACCGG GAGG CCGGTA TTTCTGAAGCCACCA TERM 440 350594 - 350636 + F 70 -4.7 -4.4009 | gap 1, opp_overlap 350587, overlap 350598 AACAACACCCGATGG CCCACATCTGCCGCTTTCAC ACCG GGGGCAGCGGCC-AGGTGGG TTTTCTCCACTCCGG TERM 441 351356 - 351370 + F 72 -5.6 -4.51765 | overlap 351357 AGTCTGAATTGTATC TCCCTC CTG GAGGGC TTTCTTTAGATTCTC TERM 442 351357 - 351369 + F 70 -9.1 -3.29975 | overlap 351356 GTCTGAATTGTATCT CCCTC CTG GAGGG CTTTCTTTAGATTCT tcfA 351764 - 352474 + | putative fimbrial protein TERM 443 352492 - 352478 - f 76 -4.2 -4.98531 | GCCGGAAAGTAAAAA CACACG GAG CGTACG CTATACCCTACATTT TERM 444 352613 - 352630 + G 81 -6.9 -4.80417 | overlap 352615 CTTTTATTGCCGCAG CTGTGGC ATTG GCCACCG TTTATTCTTTTTCTG tcfB 352525 - 353100 + | putative fimbrial subunit tsaC 353209 - 355896 + | outer membrane fimbrial user protein TERM 445 356280 - 356268 - g 79 -7.7 -4.38927 | GTTTCAGAGAACAAA TCAGC CAT GCTGA AATCACGCTCATACT tcfD 355919 - 356998 + | putative fimbrail protein tinR 357131 - 357586 + | transcriptional regulator TERM 446 358284 - 358297 + G 93 -4.5 -5.63517 | overlap 358285 GGAATGCAATGGCCA TCGTC ATAT GACGG TTTTTTCTTTCGGGA STY0350 357726 - 358343 + | hypothetical protein TERM 447 358443 - 358430 - T 70 -5.3 -4.37506 | ACGATTAAATATAAA GAACA TCAT TGTTC GTGCGGTGGGGAGGC TERM 448 358625 - 358663 + T 76 -7.6 -4.20868 | overlap 358626 TGTATCTCGTTATAC GCACACTCACATTACTAA TCA TTATTAATATGAGTGTGG TTCTTGTTTTACGCA TERM 449 358626 - 358662 + T 75 -11.1 -3.11798 | overlap 358625 GTATCTCGTTATACG CACACTCACATTACTAA TCA TTATTAATATGAGTGTG GTTCTTGTTTTACGC TERM 450 358929 - 358950 + T 71 -10.1 -3.21099 | overlap 358930 TGTGCATTGACATCC TCCACGTCC TGAA GGGCGTGGG TTCCTGCTCCAACGG TERM 451 358930 - 358949 + T 73 -11.4 -2.52516 | overlap 358929 GTGCATTGACATCCT CCACGTCC TGAA GGGCGTGG GTTCCTGCTCCAACG STY0351 360025 - 359306 - | outer membrane adhesin TERM 452 359382 - 359396 + g 76 -2.8 -5.06451 | TAAGCGGTATGTTCA TCACCA GCA TAGTGA TTTTTTGAAATGCTC TERM 453 360341 - 360318 - R 95 -11.8 -3.87815 | CCCGACCTGGATAAA GCCCGTTATC CAGG AATAACGGGC AAAAATATTTACTCA STY0352 360757 - 360350 - | hypothetical protein TERM 454 361065 - 361038 - R 79 -9.9 -3.66999 | gap 1, opp_overlap 361042, overlap 361041 361042 AGTTACGGAGTGAAA CAATCCCGCCGC GGTGA GCGGCAGG-TTG CTTACAAGGTGAATG TERM 455 361063 - 361041 - R 74 -8.3 -3.9693 | opp_overlap 361042, overlap 361038 361042 TACGGAGTGAAACAA TCCCGCCGC GGTGA GCGGCAGGT TGCTTACAAGGTGAA TERM 456 361042 - 361062 + r 73 -9.6 -3.34344 | opp_overlap 361042 361041 361038 ACGGAGTGAAACAAT CCCGCCGC GGTGA GCGGCAGG TTGCTTACAAGGTGA TERM 457 361062 - 361042 - R 78 -11.8 -2.97676 | opp_overlap 361042, overlap 361041 361038 ACGGAGTGAAACAAT CCCGCCGC GGTGA GCGGCAGG TTGCTTACAAGGTGA STY0353 361834 - 361067 - | hypothetical protein TERM 458 361923 - 361906 - R 100 -14.1 -5.08088 | AAGCGGCAAGAAAAA GCCCCGC GAAA GCGGGGC AGGAAAGACACGAGA fadE 364387 - 361943 - | acyl-CoA dehydrogenase TERM 459 364204 - 364174 - G 81 -12.6 -3.03159 | overlap 364163 GGAAGCCGCGGAACA CCGGTGCGGAAATC ATT GATTTTCGCATCGG TGTGAGGTTAAACGG gmhA 364627 - 365205 + | phosphoheptose isomerase TERM 460 365290 - 365262 - f 83 -13.1 -3.23274 | opp_overlap 365248 365247 365289, overlap 365244 365257 GGCCCGATAAGCGAA GCGCCATCGGGCA TTG TGCCGGATGGCGA CGCAAGCGTCTTATC TERM 461 366096 - 366075 - g 73 -8.7 -3.91798 | TAACGGGGAATGAAA CCTGGCAAA AGAT TATGCCAGG CGAATGGGCGTTATT yafJ 365369 - 366136 + | hypothetical protein yafK 366847 - 366107 - | hypothetical protein TERM 462 366846 - 366833 - G 91 -3.8 -5.46657 | opp_overlap 366820, overlap 366820 CATCGCAAGAAAAAA TGCG ATTTTA CGCA TACTGCTTGTTCCTT dinP 367097 - 368152 + | DNA polymerase IV TERM 463 368522 - 368547 + G 75 -3.9 -4.85599 | gap 1 CAGATCTGCATCCGG GGC-GCGGCTAT CCT ATTGGCGCAGCC TTTTTCTCGCGTGGA STY0359 368371 - 369510 + | hypothetical protein TERM 464 369922 - 369886 - g 91 -9.5 -4.66318 | AGCACGTTAATAAAA CCGACTCGGCA-GTGCG GGCCA CGCACCTGGCGAG-CGG GATTAGCGTGAAGGT prfH 369507 - 370121 + | peptide chain release factor-like protein TERM 465 370239 - 370261 + T 70 -9.9 -3.10173 | gap 1, overlap 370238 TATTCCATATTGATA GCCCGTC-CA GAAA TGAGACGGGC ATTTTAGCGCTTTCT pepD 371733 - 370276 - | aminoacyl-histidine dipeptidase precursor TERM 466 371457 - 371482 + g 81 -2.5 -5.40072 | GCCGGATGGGATCTG TAGTGAAGTCG TGAA CGGTGTCGCTA TTTTTTTGCGGCACC TERM 467 371714 - 371691 - G 83 -7.6 -4.57837 | gap 1 AGATTTTGGCAAAAA TATC-CCACAA AGG TTGTGGTGATA ACTGAGACAGTTCAG TERM 468 372327 - 372345 + G 73 -10.2 -3.33003 | opp_overlap 372327, overlap 372319 ACGATTTTCGCTAAA CCGGCGGG CCG TCCGCTGG TTGATGATTATGTTA gpt 371982 - 372440 + | xanthine-guanine phosphoribosyltransferase TERM 469 372455 - 372479 + F 100 -17.1 -4.78572 | overlap 372457 ATCAGCAGCTTTTCA GAGCGCCCGGC AAT GCCGGGCGCTG TTTTATTGGTTACAA TERM 470 372457 - 372477 + F 100 -19.7 -4.00694 | overlap 372455 CAGCAGCTTTTCAGA GCGCCCGGC AAT GCCGGGCGC TGTTTTATTGGTTAC TERM 471 373047 - 373077 + G 70 -3 -4.70659 | overlap 373048 ACGTGAAATGGAATT TGCCGTTCCTGGCG GTT CGCCTGTCACCGCG TTTTTACATATGCCG frsA 372529 - 373773 + | fermentation/respiration switch protein crl 373831 - 374232 + | DNA-binding transcriptional regulator Crl phoE 375335 - 374283 - | outer membrane phosphoporin protein E TERM 472 375870 - 375887 + G 71 -6.3 -4.35926 | CAAAGCCGTCTGATT CAACTGT GGGA GCAGTTG TTTTCAATTTACGGT proB 375618 - 376721 + | gamma-glutamyl kinase proA 376733 - 377983 + | gamma-glutamyl phosphate reductase STY0368 378398 - 378796 + | hypothetical protein TERM 473 378809 - 378834 + T 77 -10.5 -3.38046 | overlap 378806 378810 TGAATTCTGGCCTGT CTCAGGGATAC GATC GTATCCCTGAA TATTTCCCATCAAAA TERM 474 378810 - 378833 + T 83 -14 -2.62613 | overlap 378809 378806 GAATTCTGGCCTGTC TCAGGGATAC GATC GTATCCCTGA ATATTTCCCATCAAA stbE 379602 - 378844 - | fimbrial chaperone protein TERM 475 379362 - 379344 - GT 77 -10.2 -3.38046 | opp_overlap 379354, overlap 379342 GCTGCATTTTAAATA CCGGCGGC AGC GCCACCAG CGGCGTTTTGCTGTT TERM 476 379354 - 379367 + gT 70 -5.2 -4.46656 | opp_overlap 379344 379342, overlap 379363 AAATACCGGCGGCAG CGCC ACCAGC GGCG TTTTGCTGTTATCCG stbD 380893 - 379568 - | putative fimbrial protein TERM 477 379893 - 379915 + gr 85 -12.6 -3.33696 | overlap 379897 GTTAGCCCCAGGCGA CGCGCCGCCG CCA CGGCGGTGGG TTGATTAACGACAAA TERM 478 379897 - 379911 + gr 78 -12.8 -2.60244 | overlap 379893 GCCCCAGGCGACGCG CCGCCG CCA CGGCGG TGGGTTGATTAACGA stbC 383459 - 380898 - | outer membrane fimbrial usher protein TERM 479 382161 - 382185 + g 89 -13.5 -3.46602 | GCTGTAACTGAGTTC CGCGCGCCAGC CTT GTTGGCGCTCG TTATGCTCTGCGCGC TERM 480 382989 - 382974 - G 87 -8.2 -4.58395 | opp_overlap 382983 GTTATGGCGTAAAAA CAGCGC CAGC GCGCCG CTATCCCACTCTGAA stbB 384204 - 383443 - | fimbrial chaperone protein TERM 481 384256 - 384231 - R 73 -7.5 -4.18018 | overlap 384232 CCTGGCGATTGAAAA TGGTCTGGCGT TTCA ATGCCAGACCG TAGCGACAATTATTT TERM 482 384255 - 384232 - R 75 -11 -3.10597 | overlap 384231 CTGGCGATTGAAAAT GGTCTGGCGT TTCA ATGCCAGACC GTAGCGACAATTATT stbA 384802 - 384266 - | fimbrial protein TERM 483 385807 - 385790 - g 100 -6.3 -5.97575 | overlap 385794 AACCTATAAAAAAAA TCACCTC CCTA AAGGTGA GTGATGAAAACGTTA STY0374 385465 - 386199 + | transmembrane regulator STY0375 386344 - 386673 + | hypothetical protein TERM 484 387658 - 387669 + G 100 -4.4 -5.74684 | CGTTATCGGCATACT GGTT ACAA AACC TTTTTATTTTTATTC TERM 485 388180 - 388161 - g 72 -2.2 -4.83615 | gap 1, overlap 388141 388162 CAGGTCGCAGAAAAA CTTTCAACG CTC CGT-GAAAA AGGCGTGTTAATAGC STY0376 386985 - 388559 + | putative rtn protein STY0377 388659 - 389402 + | transmembrane regulator STY0378 389375 - 389923 + | hypothetical protein STY0380 390264 - 390788 + | outer membrane protein STY0381 391048 - 391575 + | transcriptionl regulator TERM 486 391698 - 391686 - g 74 -3.3 -4.8855 | opp_overlap 391686, overlap 391687 AAAAAACAAAAATAA GGCTC AGA GAGCA TATTGAAAAAACTGA STY0382 391586 - 391810 + | hypothetical protein STY0383 391868 - 392227 + | lipoprotein TERM 487 392245 - 392302 + T 74 -8.09999 -3.88603 | opp_overlap 392249, overlap 392238 392257 TTATTTTGCAGGCAA TATATGCCTGTTTAGCGCGCGCGCCGC ACTG GCGACGCGCGCGCTATTTGGGCTAACC TTGCTTTTTCTCGCT TERM 488 392298 - 392249 - T 93 -15.5 -3.10344 | opp_overlap 392238 392245 392257 TTTGCAGGCAATATA TGCCTGTTTAGCGCGCGCGCCGC ACTG GCGACGCGCGCGCTATTTGGGCT AACCTTGCTTTTTCT TERM 489 392257 - 392290 + T 100 -23.9 -3.61103 | opp_overlap 392249, overlap 392245 CAATATATGCCTGTT TAGCGCGCGCGCCGC ACTG GCGACGCGCGCGCTA TTTGGGCTAACCTTG TERM 490 392792 - 392835 + T 74 -10.9 -2.78384 | gap 2, opp_overlap 392792, overlap 392806 GATGGTCGGGAAGAA GGCGGCGC-GCGCTG-CGCCT ATCC GGGCGTTTGCGCCGCGCAGCC TGTACTCGGAGGCGC STY0385 393276 - 392809 - | hypothetical protein TERM 491 393165 - 393151 - GT 71 -7 -4.07568 | opp_overlap 393138 CGCCGCCCTGCAAAA GGCCGG TTT CCCGCC GCGCGAGAGGTAATC STY0386 393377 - 393222 - | hypothetical protein TERM 492 393386 - 393366 - GH 78 -6.1 -4.60678 | opp_overlap 393368 393369, overlap 393369 CAAAAAGATAACAAA TAAGTAGCG CAA CGCTACCTT GTTACGTCGCTTTGA TERM 493 393383 - 393369 - GH 87 -10 -4.34559 | opp_overlap 393369 393368, overlap 393366 AAAGATAACAAATAA GTAGCG CAA CGCTAC CTTGTTACGTCGCTT TERM 494 394251 - 394270 + G 75 -7.1 -4.4009 | opp_overlap 394250 394251, overlap 394253 AATTTTTTATAACAT TGCCGCC ATGCTC GGCGGTA TTTTCTACGGTACGC TERM 495 394325 - 394312 - g 86 -6.7 -5.00884 | ATTGGGCGTAAAAAA GCGAT CATG ATCGC CGCCTTTCTTGCGCT STY0387 393469 - 394722 + | putative metabolite transport protein TERM 496 394728 - 394759 + F 82 -13 -2.80988 | gap 1, opp_overlap 394724 394726 394729, overlap 394726 394752 TCGCACGTAAACACT ACGCTCCTGGCG-CA TAC TGTCGCCGGGAGCGC TCCTTCCTCCTGTGG TERM 497 394758 - 394729 - f 87 -14.3 -2.86124 | gap 1, opp_overlap 394728 394726 394752, overlap 394724 394726 CGCACGTAAACACTA CGCTCCTGGCG-CA TAC TGTCGCCGGGAGCG CTCCTTCCTCCTGTG mod 394911 - 396869 + | type III restriction-modification system StyLTI enzyme mod TERM 498 399336 - 399322 - f 71 -10 -3.1637 | opp_overlap 399300 ACAGACGCGGATTAA TGCGCA TTT TGCGCA GCGCCACGATTATCT TERM 499 399928 - 399900 - f 72 -5.8 -4.54449 | opp_overlap 399900, overlap 399902 ATAGGCCATATAAAA TGGCCGCCGCGC AGCGA GCGTTGCGGTCA TTCTCCTGTGCTAAT TERM 500 399900 - 399928 + F 79 -10.2 -3.48668 | opp_overlap 399900 399902 ATAGGCCATATAAAA TGGCCGCCGCGC AGCGA GCGTTGCGGTCA TTCTCCTGTGCTAAT STY0391 400126 - 400227 + | hypothetical protein STY0392 400342 - 401745 + | terminal oxidase subunit I TERM 501 401927 - 401943 + G 75 -5.7 -4.59853 | overlap 401933 CGAAACTTGGCTAGT GCTGGGC GGG GCCGGGC TTTTTGGCGCGTTCC STY0393 401742 - 402752 + | terminal oxidase subunit II TERM 502 402898 - 402924 + G 100 -14.5 -4.83169 | ACTGATACCCCCGGA CGCGCTTTCGT CTCTC GCGAAAGCGCG TTTTTATCGACAGAT STY0394 402769 - 402993 + | hypothetical protein STY0395 403089 - 404093 + | AraC family transcription regulator TERM 503 404762 - 404746 - g 74 -7.9 -4.08767 | opp_overlap 404735 TTGACGTCGCGAAAA CCGGCGT TTG ATGCCGG AGGAGAAGTGAAGCT TERM 504 405648 - 405624 - g 91 -7.2 -4.84359 | gap 1, opp_overlap 405624 405635 CGATCTCGATAAAAA CAACGTCAGCA CCCG TGCCG-CGTTG CTTTATCTGTTCGAC foxA 404257 - 406347 + | ferrioxamine B receptor precursor STY0397 407020 - 406388 - | RhtC-like transporter TERM 505 406635 - 406618 - G 76 -2.7 -5.08824 | GCGTTACGGAAAAAA TACTGAT AAAA AACAGTA CGGTTTGCGGATTGG TERM 506 406701 - 406684 - G 74 -2.7 -4.86731 | gap 1 CCCGGCGAAAGAAAA TTGTCCAC GGG GCGG-CAA TCGGCGTCTGGAGCG TERM 507 406885 - 406865 - G 100 -12.5 -4.63932 | opp_overlap 406868 CAGCCCGGAATAAAA GGCGTCTCC CGT GGCGACGCC CAGGCCGGTGATGAC TERM 508 407289 - 407306 + G 71 -8.5 -3.85698 | TGCTTGGCGCATTAG CGTTTGT CGTG ACAAACG TTTATGCCGCAGAAA TERM 509 407351 - 407334 - g 91 -3.5 -5.5943 | gap 1, overlap 407335 407336 407338 AAATCATGAAAAAAA CGGACTTT GAT AAAGTC-G CCTCCGAATACACGA STY0398 407252 - 407527 + | hypothetical protein TERM 510 407547 - 407571 + T 100 -12.2 -5.1356 | gap 1, opp_overlap 407547 GTTGCATCATAAAAA TACCCGCCTGG GTTT CC-GGCGGGTA TTTTTATTCCTGGCA TERM 511 407571 - 407547 - T 100 -12.2 -4.91109 | gap 1, opp_overlap 407547 GTTGCATCATAAAAA TACCCGCCTGG GTTT CC-GGCGGGTA TTTTTATTCCTGGCA prpR 409288 - 407663 - | propionate catabolism operon regulatory protein TERM 512 407912 - 407902 - G 100 -8.2 -5.42259 | CGACGCTTAAAAAAA GCGC CAG GCGC TCCATCATATTACGC TERM 513 408091 - 408047 - G 87 -8.5 -4.57569 | overlap 408048 408072 CGACTGTTTTAAAAA GCTTTCCGCCAGCGGCAAAAT ATC AGCCTGCCGCTCGCGCAAAGG AGGAAGCGTCAGACG TERM 514 408090 - 408048 - G 80 -12 -3.3422 | overlap 408047 408072 GACTGTTTTAAAAAG CTTTCCGCCAGCGGCAAAAT ATC AGCCTGCCGCTCGCGCAAAG GAGGAAGCGTCAGAC TERM 515 408224 - 408241 + g 74 -4.7 -4.7373 | GATCGGTTGGTGTCC GCCGACG CGAG TGACGGC TTTTTCCTCCAGTAC prpB 409554 - 410441 + | 2-methylisocitrate lyase TERM 516 410460 - 410495 + F 74 -8.2 -3.86897 | gap 1, opp_overlap 410458 410459 410479 GTGGGCCTGATAAGG CGAAGCCGCCATCAGGC AAT GCCGGATGGCA-CTACG TTTATCCCGCCTACG TERM 517 411075 - 411054 - g 71 -10.1 -3.57792 | opp_overlap 411052 GTATTCAGCCGGAAA CCGACGATG ATTC CATCGGCGG CCATTTCCTGCATCT prpC 410564 - 411733 + | methylcitrate synthase TERM 518 412800 - 412776 - g 85 -4.2 -5.28778 | gap 1, opp_overlap 412795, overlap 412790 ATTATCGATAAAAAA GGCCCGCTCAA TAAC CCG-GCGGACC GCGATCACTGTATCC TERM 519 413141 - 413104 - g 73 -6.3 -4.4874 | gap 1, opp_overlap 413109, overlap 413108 413109 TCGAAAAATTTAAAA TTAAC-CTGGCGCGTCAG TTC CTGACTCGCCAGCAGCAA CGCATTCTGGATGTC TERM 520 413136 - 413108 - g 86 -13.1 -3.74303 | opp_overlap 413109, overlap 413104 413109 AAAATTTAAAATTAA CCTGGCGCGTCAG TTC CTGACTCGCCAGC AGCAACGCATTCTGG TERM 521 413135 - 413109 - g 90 -16.6 -2.82955 | opp_overlap 413109, overlap 413108 413104 AAATTTAAAATTAAC CTGGCGCGTCAG TTC CTGACTCGCCAG CAGCAACGCATTCTG prpD 411771 - 413222 + | 2-methylcitrate dehydratase prpE 413263 - 415149 + | propionyl-CoA synthetase TERM 522 415242 - 415224 - T 93 -13.8 -3.5936 | TGTAAAGTCGGGAAA GGGCGGCA GCG CGCCGCCC TGTAACAGAATTAAC hemB 416227 - 415253 - | delta-aminolevulinic acid dehydratase TERM 523 416771 - 416757 - g 73 -5 -4.57569 | GCACTCCTGGAAAAA GAAACT TGT AGTCTC ACAATTAGCATTGGC STY0405 416740 - 419625 + | puative autotransporter/virulence factor TERM 524 419692 - 419669 - f 100 -15.4 -4.81851 | opp_overlap 419669 ATTTAAACTGAAAAA TGCCCGTCAA GGAC TTGACGGGCA TTATTGCAAGGAATG TERM 525 419669 - 419692 + F 100 -15.4 -3.61715 | opp_overlap 419669 ATTTAAACTGAAAAA TGCCCGTCAA GGAC TTGACGGGCA TTATTGCAAGGAATG STY0406 419711 - 420334 + | putative DNA-binding transcriptional regulator TERM 526 420376 - 420341 - T 100 -9.7 -5.19251 | gap 1, overlap 420342 GAATATTAACAAAAA TGTCGCGCCTCGT-CT GATAT AGCGCGAGGCGCGACG ACTCAGGATGCAGGA TERM 527 420375 - 420342 - T 95 -13.2 -3.69924 | gap 1, overlap 420341 AATATTAACAAAAAT GTCGCGCCTCGT-CT GATAT AGCGCGAGGCGCGAC GACTCAGGATGCAGG ampH 421536 - 420379 - | beta-lactamase/D-alanine carboxypeptidase TERM 528 421427 - 421411 - G 70 -5.1 -4.46212 | overlap 421413 GCCGCTACCATAAAA GATATGC TCG GCATAAC GATCAACGATATCAG sbmA 421872 - 423092 + | transport protein TERM 529 424089 - 424071 - g 80 -8.8 -4.13767 | TGGCCGAGGCCAAAA CGGGCAAG ACG CTTGCGCG GGAAATGTTGCCCGG yaiW 423107 - 424201 + | putative lipoprotein STY0410 424547 - 424239 - | hypothetical protein STY0411 424815 - 425030 + | hypothetical protein TERM 530 425050 - 425019 - T 90 -10.2 -4.21908 | gap 1, overlap 425021 GATGATGAGGTAAAA GACGCCCGATAAACG TTG CGCT-ATCGGGCGTG CGCTATTACATCGTG TERM 531 425048 - 425021 - T 93 -12.8 -3.70674 | gap 1, overlap 425019 TGATGAGGTAAAAGA CGCCCGATAAACG TTG CGCT-ATCGGGCG TGCGCTATTACATCG ddl 426150 - 425056 - | D-alanyl-alanine synthetase A TERM 532 426214 - 426202 - H 75 -6.2 -4.49311 | overlap 426191 ATTACCACGACAAAA CGCG GGTTT CGCG GGCTTCTGCCATAAT STY0413 426228 - 426941 + | hypothetical protein TERM 533 427709 - 427719 + G 74 -4.6 -4.7078 | overlap 427710 AAGCGAACGCCTGAG CGGT AAA GCCG TTTTTGCGTCGTTAC TERM 534 427746 - 427756 + G 76 -3.2 -5.04249 | TTACCTTATCCTGCG CTGG TGA TCAG TTTGTTTTTTACCAC STY0414 427110 - 428309 + | efflux pump TERM 535 428317 - 428342 + F 85 -14.1 -3.03781 | overlap 428312 GCCAATAGCGGTGCA TCGTAACGGCG CTTC TGCCGTTACGA TATGGTTTAAATTAA yaiB 428600 - 428866 + | hypothetical protein TERM 536 428975 - 428917 - f 72 -9.3 -3.59252 | gap 2, opp_overlap 428919, overlap 428919 TTTTATGAAATAACA TAGCCGCTTCGTTTTTATTTTCTTCTG GTTAATA CAGAGCAAAATAAAAACGAAGCGGC-- TATGGTAATAACAGT TERM 537 428919 - 428975 + F 100 -23.5 -2.82635 | opp_overlap 428917 428919 TTATGAAATAACATA GCCGCTTCGTTTTTATTTTCTTCTG GTTAATA CAGAGCAAAATAAAAACGAAGCGGC TATGGTAATAACAGT TERM 538 428975 - 428919 - f 100 -21.3 -3.36839 | opp_overlap 428919, overlap 428917 TTATGAAATAACATA GCCGCTTCGTTTTTATTTTCTTCTG GTTAATA CAGAGCAAAATAAAAACGAAGCGGC TATGGTAATAACAGT psiF 429218 - 429538 + | hypothetical protein adrA 429630 - 430742 + | diguanylate cyclase AdrA proC 431566 - 430757 - | pyrroline-5-carboxylate reductase yaiI 431706 - 432161 + | hypothetical protein TERM 539 432173 - 432163 - f 76 -4 -5.05153 | AGCGTAAAAAATAAA TCAT GTA ATGA AAAATTTACAGTTTA aroL 432346 - 432891 + | shikimate kinase II TERM 540 432984 - 432972 - g 74 -4.7 -4.68593 | GTCACCATTGAAAAA GGCAC GCC GGGCC AGACGGTGACGTGGT yaiA 432918 - 433109 + | hypothetical protein aroM 433360 - 434037 + | hypothetical protein yaiE 434108 - 434392 + | hypothetical protein TERM 541 434397 - 434424 + T 72 -10.6 -2.90723 | gap 1 GCTATTTGTAACGGT GAGTCCCCTCTCC GGC GGAGAGGG-ACCC TCTGGTTAGCGCTGC rdgC 435341 - 434430 - | recombination associated protein TERM 542 435067 - 435079 + g 74 -7.7 -4.14243 | CGTCCCTGATCGGCT TCCAG TTT CTGGA TTTTCGCCTCCAGTG TERM 543 436254 - 436276 + G 77 -4.8 -4.85782 | opp_overlap 436254 AGCGCCTGTACAAAA CGGTTCCGTC GCT GATGAAATCG TTTGTTTTTGGCGGC yajF 435467 - 436375 + | fructokinase TERM 544 436607 - 436617 + T 76 -8.2 -4.07568 | overlap 436605 CGCCCAGCAGTTCGC CGCC TTT GGCG TTTTGCAGCAGCAGG TERM 545 437065 - 437048 - T 78 -5.5 -4.79352 | opp_overlap 437048 GCACCCAGAAGAAAA TCGCGGT GAGC ACGGCGA TGTTGAAAACCGCGA TERM 546 437101 - 437091 - T 73 -2.4 -5.1356 | CGCGATCAATAAAAA GGTG TAG CGCC AGCTAAATTCCTGGC sbcC 440875 - 437771 - | exonuclease subunit SbcC TERM 547 438050 - 438032 - G 71 -10.2 -3.28712 | TTCGCCGCCTGATAA CGTTCGCG TAT CGCGCACG GCGTCGGCCTGCCAG TERM 548 438950 - 438930 - G 71 -9.7 -3.55071 | overlap 438913 GTATACTGCGCCAAA TCAGCCGTC AGC GACGCCTGA CGCTGTGCAATCTGC TERM 549 440017 - 440050 + g 91 -7.3 -4.83615 | gap 1, opp_overlap 440003, overlap 440029 ACTGGCGAGCAGGTT GCGCCAGCGTCAGCGC CGC GAGCTGCGGCTG-CGC TTTTTCTCGCGCCTC TERM 550 440154 - 440176 + g 86 -9.9 -4.24075 | gap 1, overlap 440154 AGGTGCTGCTGCTGT C-CCTGCTGG TCGG CCAGCAGGCG TTTCTCTTCGTCAGT sbcD 442074 - 440872 - | exonuclease subunit SbcD TERM 551 441946 - 441930 - G 72 -3.7 -4.73388 | AATCGGTATCAAAAA TATCGCC AGC GACAATA ATGGCATCCACCTGA phoB 442289 - 442978 + | transcriptional regulator PhoB TERM 552 442980 - 443021 + F 95 -13.1 -3.85389 | gap 1 CGACCCGCTTTTAAT GCCTTTTCCGCCAGTTGATC ACA GGTTT-CTGGCGGAGAAGGC TTTCCATTCTTGAGG TERM 553 443108 - 443124 + G 100 -6.5 -5.69379 | CTCTGTTGCATCCCC GCGCTTA TCC TTAGCGC TTTTTTTGGTTATCT TERM 554 443535 - 443520 - g 74 -4.6 -4.68593 | CCCAGTATTTAAAAA CGCGTG ATTT CACCCG TCCGCTTCATTTGGT phoR 443048 - 444343 + | phosphate regulon sensor protein TERM 555 444370 - 444391 + F 100 -13.1 -4.90525 | opp_overlap 444373 AAGTATAACTTTCCA TAAGCCAGC GGAT GCTGGCTTA TTTTCTTTGCAGTTA TERM 556 444388 - 444373 - f 77 -10.4 -3.31799 | opp_overlap 444370 TATAACTTTCCATAA GCCAGC GGAT GCTGGC TTATTTTCTTTGCAG TERM 557 444416 - 444432 + F 80 -9.5 -3.98747 | CAGTTAAGACGGGCT CGTTGAA ACA TTCAACG TTTGGTGATTTTTTG TERM 558 445044 - 445069 + G 74 -9.7 -3.61654 | gap 1 TCGGGCCGTTATTTG CGACGCCG-CGT ACC GCGACGGTGTCG TTTGAGGTCGGTATC brnQ 444752 - 446071 + | branched chain amino acid transport system II carrier protein TERM 559 446093 - 446115 + F 100 -16.3 -5.4251 | opp_overlap 446096 TGACATATGTGTACA CCACGGGGC TTAAC GCCCCGTGG TTTTTTGTCTATGGA TERM 560 446112 - 446096 - f 71 -10.8 -2.63301 | opp_overlap 446093 CATATGTGTACACCA CGGGGC TTAAC GCCCCG TGGTTTTTTGTCTAT TERM 561 446152 - 446134 - f 100 -16 -4.18018 | opp_overlap 446124 TTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA 446265 - 446723 + | transposase for insertion sequence element is200 TERM 562 446802 - 446826 + F 93 -9.9 -4.57503 | opp_overlap 446805, overlap 446804 446805 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTATTGTGTTG TERM 563 446804 - 446824 + F 95 -12.5 -3.87147 | opp_overlap 446805, overlap 446802 446805 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTATTGTGT TERM 564 446805 - 446823 + F 93 -16 -2.90662 | opp_overlap 446805, overlap 446804 446802 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATTGTG TERM 565 446823 - 446805 - f 100 -16 -4.91109 | opp_overlap 446805 446804 446802 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATTGTG proY 446857 - 448227 + | putative proline-specific permease TERM 566 448233 - 448285 + F 84 -10.6 -3.99324 | gap 1, opp_overlap 448277, overlap 448234 GCAGGCGTAGTCGTT TTTCTCTGCCTTATCCGGTCTGCAG GCAA CGGCAGGCCGGATAA-GCGGAGCCG TTTCTCCTCCTGGAG TERM 567 448234 - 448284 + F 78 -11.9 -2.99273 | gap 1, opp_overlap 448277, overlap 448233 CAGGCGTAGTCGTTT TTCTCTGCCTTATCCGGTCTGCAG GCAA CGGCAGGCCGGATAA-GCGGAGCC GTTTCTCCTCCTGGA TERM 568 448590 - 448547 - g 75 -11.6 -3.36515 | gap 1, overlap 448545 GGCGATGCGCAAACA GCGCCGCCAGCCGCAGCCG GGCGTGA CGGC-GTGGCGAGCGACGC TCAATATCGCGTTAG TERM 569 448974 - 448962 - g 76 -3.3 -5.0538 | opp_overlap 448966 CCGTATCTGAAAAAA CTGGG CGT CACAG CGCTATATCTGAATC TERM 570 449969 - 449946 - g 81 -12.4 -3.57462 | CAGCGTATGGCGAAA CTGCGCCAGA GCAG TCTGGCGCTG CGTCGTGGCGGATGC malZ 448389 - 450206 + | maltodextrin glucosidase TERM 571 450259 - 450242 - T 100 -12.7 -5.28176 | opp_overlap 450242 CTCACGCATAAAAAA GGCTCGC ATTC GCGAGCC TTTTATCAATGCACT TERM 572 450242 - 450259 + T 100 -12.7 -4.42653 | opp_overlap 450242 CTCACGCATAAAAAA GGCTCGC ATTC GCGAGCC TTTTATCAATGCACT STY0440 450880 - 450278 - | peroxidase yajB 451671 - 451090 - | acyl carrier protein phosphodiesterase TERM 573 452308 - 452281 - g 76 -5.4 -4.70659 | gap 1, opp_overlap 452285 452296, overlap 452264 452282 452283 GTTTACAGTGAAAAA CCGGGCGCCGTCG CCG CGCCGAC-CGCGG GGCTGCACTTTGATG queA 451765 - 452829 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 574 453046 - 453079 + G 76 -9.6 -3.79251 | gap 1, opp_overlap 453045 ATTTGAGTTAGATAC CACC-GATGGTCGCG CGCGT CGCGGTCGTCTGGTG TTTGATCGTGGCGTA tgt 453026 - 454153 + | queuine tRNA-ribosyltransferase yajC 454176 - 454508 + | preprotein translocase subunit YajC TERM 575 454675 - 454645 - g 89 -13.4 -3.53091 | gap 1 ATCCGGCTGTTCAAA TCACTGGCGTGCG CGGCGT CGC-CGCCAGTGA GCAAACGCTGATCCA secD 454536 - 456383 + | preprotein translocase subunit SecD TERM 576 457357 - 457333 - g 76 -5.6 -4.72486 | opp_overlap 457336 457337 CAGAAAGTCGAAAAA GAAGGGGCGG ATCAG CCGTCCATTC TGCCGTAAACACGTA secF 456394 - 457365 + | preprotein translocase subunit SecF TERM 577 457390 - 457409 + F 100 -10 -5.76237 | TAAGTGTTATCTGAA TCCCGGTC ATGC GATCGGGA TTTTTTATTTATGTA STY0447 457512 - 457877 + | hypothetical protein TERM 578 458303 - 458313 + G 74 -8.2 -3.9749 | overlap 458302 GTACATCTCCACATT CGCG CAG CGCG TTTGATCTTATCCAT STY0448 457903 - 458595 + | DeoR family transcriptional regulator yajD 458765 - 459112 + | hypothetical protein TERM 579 459124 - 459110 - T 72 -2.8 -5.06961 | ATGAACAAAAAGAAA TAAGCA GAC TGCTGA CAAAGCTGTTGGTGC TERM 580 459216 - 459234 + T 74 -3.8 -5.00616 | overlap 459217 TTATTGGTTTTCGTA GGTCGGAT GCA ATCTGACA TTTTTTCAGCCCCGG TERM 581 459300 - 459319 + T 100 -2.8 -6.20267 | overlap 459302 ACATTGTCACTGGAA TTCCGATC GCAA GGTTGGGA TTTTTTTGTTTTTAA STY0450 459691 - 459365 - | hypothetical protein TERM 582 459489 - 459448 - G 76 -5.2 -4.78848 | opp_overlap 459451, overlap 459484 GCTGGAAAGAGAAAA CCCCCGC-ACATTGTTCGGT ATTC ACCGG-CAACATTACGGGGG CTAACTTGACCCCAG TERM 583 459713 - 459732 + r 100 -13.6 -5.07107 | opp_overlap 459711 459710 ATGCGCCCGAAACGG GCCAGAGG ACGA CCTCTGGC TTTTTTGCAGGTTTA tsx 460608 - 459745 - | nucleoside-specific channel-forming protein tsx precursor TERM 584 460661 - 460651 - R 74 -6.8 -4.21812 | opp_overlap 460651 CGGGAGTGAAAAGAA CGCA ATT TGCG TTTCTAAATATTTCG yajI 461447 - 460908 - | hypothetical protein TERM 585 462262 - 462239 - g 70 -6.6 -4.07687 | opp_overlap 462245, overlap 462245 462246 ATGGCGGGCGCAAAA GCCAAAGGCG CAAC CGCCTATGTC ACGCTTGAACCCTGT TERM 586 462256 - 462245 - g 71 -7.2 -3.92659 | opp_overlap 462245, overlap 462239 462246 GGCGCAAAAGCCAAA GGCG CAAC CGCC TATGTCACGCTTGAA ribD 462053 - 463156 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 587 463669 - 463653 - g 74 -7.9 -4.17132 | overlap 463654 463662 AAAGCCGGTAATAAA GGCGCAG AAG CTGCGCT GACCGCGCTTGAAAT TERM 588 463668 - 463654 - g 72 -11.4 -3.09556 | overlap 463653 463662 AAGCCGGTAATAAAG GCGCAG AAG CTGCGC TGACCGCGCTTGAAA ribH 463245 - 463715 + | riboflavin synthase subunit beta nusB 463736 - 464155 + | transcription antitermination protein NusB TERM 589 464162 - 464204 + F 88 -5.6 -5.61277 | gap 2, opp_overlap 464171 464175, overlap 464192 AAAAAGTGATTCACA GGCCGGAAAGATAGCGGG CGATCGATA CCCGCCGTCT--CCGGCC TTTTCTTTTTTTCTG STY0458 464234 - 465211 + | thiamine monophosphate kinase STY0459 465189 - 465704 + | phosphatidylglycerophosphatase A STY0460 466782 - 465808 - | putative oxidoreductase TERM 590 466245 - 466266 + g 76 -5.2 -4.82901 | gap 1, opp_overlap 466249, overlap 466249 GATCCTGCATAGTGA CAA-ACGGC GCCCA GCCGTGTTG TTTTTGTAGCGCCAG TERM 591 466570 - 466556 - G 74 -7.8 -4.07568 | TCGCGCCGGGCAAAA TCACGC AGC GCGCGA CCGACAATCTCTTCG dxs 468701 - 466839 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 592 467012 - 467025 + g 73 -5.2 -4.63932 | CGCCGCTGCCAGCGC CGCC CATAAT GGCG TTTTCTTCCAGCGTC TERM 593 467826 - 467849 + g 79 -3 -5.19212 | gap 1, overlap 467827 467828 AGTGATCGGATCTTT TTCCGCGGGCT CAT AGCC-GCGGCC TTTTTTGGTCATGAT TERM 594 468272 - 468222 - G 71 -9.8 -3.54543 | gap 3, opp_overlap 468221 468219 468222 468269 ATTCATTGCTTCAAA CGCCATACCGGC-G-GTGA-TGGCG CCGT CGCCAATCACACAGACGGTGCGGCG ATCTTTGCCTTCTTT ispA 469624 - 468725 - | geranyltranstransferase TERM 595 469060 - 469079 + g 71 -12.1 -2.53271 | overlap 469059 469058 CGCCAAGTCTAACGG CGGCGCG AATGAG CGCGCCG GTCTTATGGCGATGA xseB 469867 - 469625 - | exodeoxyribonuclease VII small subunit TERM 596 470260 - 470250 - g 75 -6.8 -4.49756 | overlap 470251 CGCCAAAGATGAAAA CCAG CGT CTGG CGATTCGCGACGCGC STY0464 470077 - 471525 + | thiamine biosynthesis protein ThiI phnV 472366 - 471575 - | membrane component of 2-aminoethylphosphonate transporter phnU 473229 - 472360 - | membrane component of 2-aminoethylphosphonate transporter phnT 474341 - 473232 - | 2-aminoethylphosphonate ABC transporter ATP-binding protein phnS 475360 - 474347 - | periplasmic binding component of 2-aminoethylphosphonate transporter TERM 597 474623 - 474643 + g 93 -12.5 -4.05446 | opp_overlap 474622 474619 AATGACATAAGGGAT GGCCAGCGC GCT GCGCTCGCC TTTGTCGTTGGCCGG phnR 476277 - 475558 - | regulator of 2-aminoethylphosphonate uptake and metabolism operon TERM 598 475961 - 475976 + g 75 -6 -4.65895 | opp_overlap 475959, overlap 475959 ACGGTGGTTAACACG CCGCTC AGTA GCGCGG TTTTTGGCTCCCGCC phnW 476417 - 477520 + | 2-aminoethylphosphonate--pyruvate transaminase phnX 477530 - 478339 + | phosphonoacetaldehyde hydrolase TERM 599 478361 - 478409 + T 100 -16.1 -3.53444 | opp_overlap 478346, overlap 478353 478363 478364 TGCCGGATGGCGCTG CCGCTTATCCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGGTG TTTACGCCGCCATCC TERM 600 478363 - 478407 + T 100 -17.3 -3.34517 | opp_overlap 478346, overlap 478361 478364 CCGGATGGCGCTGCC GCTTATCCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGG TGTTTACGCCGCCAT TERM 601 478364 - 478406 + T 100 -20.8 -2.60496 | opp_overlap 478346, overlap 478363 478361 CGGATGGCGCTGCCG CTTATCCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAG GTGTTTACGCCGCCA thiJ 479026 - 478436 - | hypothetical protein apbA 479900 - 478989 - | 2-dehydropantoate 2-reductase STY0474 480026 - 480517 + | nucleotide-binding protein STY0475 481928 - 480564 - | major facilitator transporter TERM 602 481889 - 481912 + g 70 -5.3 -4.51097 | gap 1 TCCCTAAACCCCATG TGGCGCGCAG CTCCC CTG-GCGTCA TTTTATAATCGTTCA TERM 603 482958 - 482968 + GH 85 -2.4 -5.56568 | AAATAATAGACCCGA GAGC GAT GCGC TTTTTTTAGTCGTAT STY0476 482464 - 483135 + | hypothetical protein TERM 604 483176 - 483162 - gf 74 -5.6 -4.56597 | opp_overlap 483149 GCCGCCGCGGAAAAA GGCGTC GTT GAGGCC CAATCTCTCTTGGGG TERM 605 483404 - 483421 + GF 71 -9.9 -3.20633 | opp_overlap 483399 TGGTACTAATTCGCG CTCAACG ATGC CGTTGAG TTGGATGTATTATAA STY0477 483048 - 483593 + | hypothetical protein TERM 606 483620 - 483605 - f 86 -4.7 -5.47399 | GTAACCCTAAAAAAA GAGAG TGTTTT CTCTC GCGGGATAACGGCTA STY0478 483689 - 483973 + | hypothetical protein STY0479 483985 - 484248 + | hypothetical protein STY0480 484300 - 485454 + | hypothetical protein TERM 607 485493 - 485468 - T 100 -16.3 -4.69559 | opp_overlap 485464 485463 AAACGCGAAAAGAAA GATGGCGTATC AAGC GATACGCCATC TAAAGTCTTTACCAG cyoE 486392 - 485502 - | protoheme IX farnesyltransferase cyoD 486733 - 486404 - | cytochrome o ubiquinol oxidase subunit IV TERM 608 486517 - 486488 - G 74 -10.1 -3.62572 | opp_overlap 486514 GATCAGCACGGTAAA GATGAAGGCCG TCATGTTC CAGCCTTCATC AGATTTGGTGTTCAT cyoC 487347 - 486733 - | cytochrome o ubiquinol oxidase subunit III cyoB 489328 - 487337 - | cytochrome o ubiquinol oxidase subunit I TERM 609 487382 - 487393 + g 75 -5.8 -4.66833 | opp_overlap 487381 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGACTTCCGG TERM 610 489267 - 489226 - G 95 -14.5 -3.46081 | opp_overlap 489226, overlap 489260 TACCGAAGTAAGTAA TCGCTGCCAGTATCGCCAG TCCC CCGACGATAATTGCAGCGA TCGTTACCATGACGA cyoA 490295 - 489339 - | cytochrome o ubiquinol oxidase subunit II TERM 611 489830 - 489815 - G 95 -11.8 -4.42806 | opp_overlap 489824 TCACTTTGAAATAAA CCGGCG TGTT CGCCGG GAAGGCGATCTCGTT TERM 612 489907 - 489920 + g 70 -3.1 -4.77036 | opp_overlap 489902, overlap 489908 TCCATGGAAACCACT TCGAT GGTG ATCGG TTTTTCGTCATGCGC ampG 492223 - 490748 - | muropeptide transporter TERM 613 490817 - 490804 - G 71 -8.1 -3.81755 | ACCCGCCAAAGACAA TGCCG CACA CGGCA ATCGCTACCGCAGTC TERM 614 491267 - 491279 + g 74 -3.4 -4.88736 | AAAGACCGCCGCGCC CATG CTGAA CATG TTTTTATCGGTAATG TERM 615 491589 - 491574 - G 73 -6.1 -4.42806 | opp_overlap 491583 TTACGGCCAAAGAAA TCGCG TAGCGG CGCGA CGACGGCCTGTTCCA TERM 616 492235 - 492254 + r 100 -15 -4.03167 | opp_overlap 492237 ACATAGGCATCTACA GACCCGGC TTCT GCCGGGTC TTGTTGTTGCTATTA TERM 617 492252 - 492237 - R 77 -11.8 -2.92091 | opp_overlap 492235 ATAGGCATCTACAGA CCCGGC TTCT GCCGGG TCTTGTTGTTGCTAT yajG 492845 - 492267 - | hypothetical protein TERM 618 493283 - 493303 + G 86 -7.5 -4.73613 | overlap 493278 GGTCGTGCTGGTGAG CGATCGCTT TAC AGGCGAACG TTTTCTTAATCGTCA bolA 493149 - 493466 + | transcriptional regulator BolA TERM 619 493522 - 493545 + F 93 -9.6 -4.59984 | opp_overlap 493527, overlap 493527 GCTACAGAATTATGT GAAAACGGCC TGCG GGCCGTTTTA TTTTGTCTGAATTTT TERM 620 493527 - 493540 + F 100 -9.5 -5.23292 | opp_overlap 493527, overlap 493522 AGAATTATGTGAAAA CGGCC TGCG GGCCG TTTTATTTTGTCTGA TERM 621 493540 - 493527 - f 83 -9.5 -4.17425 | opp_overlap 493522 493527 AGAATTATGTGAAAA CGGCC TGCG GGCCG TTTTATTTTGTCTGA tig 493813 - 495111 + | trigger factor TERM 622 495168 - 495147 - f 100 -12.3 -4.86033 | opp_overlap 495147 AAATTTGCACAAAAA CCCGTCACC TTTC AGTGACGGG TTTTTTTTGTCACGC TERM 623 495147 - 495168 + F 100 -11.6 -5.93809 | opp_overlap 495147 AAATTTGCACAAAAA CCCGTCAC CTTTCA GTGACGGG TTTTTTTTGTCACGC clpP 495358 - 495981 + | ATP-dependent Clp protease proteolytic subunit clpX 496233 - 497504 + | ATP-dependent protease ATP-binding subunit TERM 624 497532 - 497560 + F 80 -6.7 -4.8048 | opp_overlap 497537, overlap 497537 ACAATCAGTTAGCCA AAAAAGGGGGGAT TTT ATCTCCCCTTTCG TTTTTCCTGTAAACA TERM 625 497555 - 497537 - f 100 -8.8 -5.09895 | opp_overlap 497532 497537 CAGTTAGCCAAAAAA GGGGGGAT TTT ATCTCCCC TTTCGTTTTTCCTGT TERM 626 497537 - 497555 + F 91 -11 -4.3623 | opp_overlap 497537, overlap 497532 CAGTTAGCCAAAAAA GGGGGGAT TTT ATCTCCCC TTTCGTTTTTCCTGT TERM 627 497859 - 497838 - g 89 -2.9 -5.67967 | overlap 497841 ACCATGATAAAAAAA TCATGCTGG TCGC CCAGAAGGA AGCATCAACGGATGA TERM 628 498142 - 498132 - g 100 -5.4 -5.80364 | overlap 498133 AGCTGAACAAAAAAA TTCC GCC GGAA GTGCTGACGTCACTC TERM 629 498636 - 498623 - g 76 -3.1 -5.10029 | gap 1, overlap 498613 498625 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTCGA TERM 630 498641 - 498625 - g 80 -9.4 -4.17355 | overlap 498613 498623 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTCGATACTG TERM 631 499685 - 499673 - g 70 -3.3 -4.72986 | GACTTTTACGAAAAA CGCGA TAT CCACG TTCACGTGCCGGAAG lon 497690 - 500044 + | DNA-binding ATP-dependent protease La TERM 632 500077 - 500106 + F 100 -8.6 -5.72616 | gap 1, opp_overlap 500077 500076 CGCTAATAAAAACAG GGCTGGCAGG-CT ATTTC GGACTTGCCAGCC TTTTTTTGTATAGCT hupB 500253 - 500525 + | transcriptional regulator HU subunit beta TERM 633 500561 - 500580 + F 100 -10 -5.45652 | opp_overlap 500560 500561 GTGACAAAGTACAAG GGCGCATC AACT GATGTGCC TTTTTTATTGGCGAT TERM 634 501715 - 501697 - g 76 -11.8 -3.07947 | overlap 501689 501688 GAACAAGGGCGAAGA TTTCGCCA CGC TGGCGAAA GAGAAATCTACCGAT TERM 635 501836 - 501821 - g 93 -4.6 -5.50723 | opp_overlap 501821, overlap 501822 GGATTAAAAGAAAAA GGCCAG ATAT CTGGCG TGATTAAGTCGTCTG TERM 636 501835 - 501822 - g 71 -8.1 -3.88807 | opp_overlap 501821, overlap 501821 GATTAAAAGAAAAAG GCCAG ATAT CTGGC GTGATTAAGTCGTCT TERM 637 502595 - 502574 - g 90 -5.1 -5.27923 | gap 1 GAAGCGCAGAAAAAA GCGATGGTGC AGG GCATCA-CGC AGAACAATGCGCAAA ppiD 500816 - 502687 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 638 502750 - 502735 - f 95 -11.8 -3.89346 | opp_overlap 502735 GTTGTATCCCACAAA GGCCGC TTTC GCGGCC TTTTCCATTTCTGAG TERM 639 502735 - 502750 + F 100 -11.8 -4.39571 | opp_overlap 502735 GTTGTATCCCACAAA GGCCGC TTTC GCGGCC TTTTCCATTTCTGAG ybaV 502837 - 503211 + | hypothetical protein TERM 640 503247 - 503269 + F 73 -10.7 -2.9796 | overlap 503242 503249 ATTTGCCAGACTGTA GAGGTCATA CCAGT TATGACCTC TGTACTTGTCGCTTA TERM 641 503605 - 503629 + G 70 -2.7 -4.69415 | overlap 503606 GGAGCCAGAAGGGCA GGTGGTGGCCG ATG CGCTCATCACG TTTGTTTGTATTGAT STY0496 503315 - 503713 + | hypothetical protein ybaX 504515 - 503820 - | queuosine biosynthesis protein QueC ybaE 506280 - 504580 - | putative solute-binding protein TERM 642 505842 - 505830 - G 76 -3.3 -5.055 | TTAACCCGGAAAAAA CTTGC CCT GCGAG ATGCTGTTCCGCGCG TERM 643 506288 - 506298 + H 74 -5.4 -4.68545 | AGCCTCATAAAACCC GGAA CAC TTCC TTTTATCTGTTCACT STY0499 506380 - 507198 + | hypothetical protein TERM 644 507216 - 507234 + F 89 -4.5 -5.76633 | opp_overlap 507216 GATCTCTTCCAGCAA GCCAAAC ATTCA GTCTGGC TTTTTTTGTCTATGG TERM 645 507272 - 507254 - f 95 -12.4 -4.18018 | TTTGTCTATGGAAAA CCCCCAAC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA 507385 - 507843 + | transposase for insertion sequence element IS200 TERM 646 507922 - 507946 + T 93 -9.9 -4.65182 | opp_overlap 507925, overlap 507924 507925 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGGTTTCTA TERM 647 507924 - 507944 + T 95 -12.5 -3.91294 | opp_overlap 507925, overlap 507922 507925 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGGTTTC TERM 648 507943 - 507925 - T 100 -16 -4.91109 | opp_overlap 507924 507922 507925 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGGTTT TERM 649 507925 - 507943 + T 93 -16 -2.93149 | opp_overlap 507925, overlap 507924 507922 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGGTTT STY0501 509014 - 507959 - | putative lyase TERM 650 508660 - 508687 + g 86 -10.8 -4.13767 | AATGACAGTGGCCGC CGTAAAATTGAA TCTG TTCGATTTTACG TTTTGCGGTACAGGC ybaO 509127 - 509585 + | transcriptional regulator TERM 651 510343 - 510327 - g 86 -6.5 -5.07486 | opp_overlap 510331 510336 510337, overlap 510330 TACCGGCAAGAAAAA TATGCGC GTG GCGCGTA TTGACGCGCGTTTTG TERM 652 510336 - 510353 + G 74 -6.9 -4.25283 | opp_overlap 510330 510327, overlap 510331 510337 GAAAAATATGCGCGT GGCGCGT ATTG ACGCGCG TTTTGATCCAACCAT TERM 653 510863 - 510882 + G 90 -5.7 -5.19328 | gap 1, overlap 510854 GGCGTAGCCGACTGG CGGTCGTC AGCCA GACG-CCG TTTTTGTTCTCGGAT mdlA 509626 - 511398 + | putative multidrug transporter membrane\ATP-binding components TERM 654 511548 - 511563 + G 70 -9 -3.66178 | opp_overlap 511546 511548 ATTTCATTGATAACA TGGTGG CCCG CCACCA TTTACCGTTGGGCAA mdlB 511391 - 513172 + | putative multidrug transporter membrane\ATP-binding components TERM 655 513207 - 513223 + F 89 -6.5 -5.30616 | overlap 513208 AAACCTCGCCCATTA TGCACCG TCG TGGTGCG TTTTTCTTTCCCTGC glnK 513385 - 513723 + | nitrogen regulatory protein P-II 2 amtB 513755 - 515041 + | ammonium transporter TERM 656 515118 - 515136 + T 83 -4.4 -5.33848 | opp_overlap 515098 515120 515121, overlap 515120 515121 CGTCATCAGGCCATT AACGCCGC ATA GCGGCATG TTTTTTAATTGTGAT TERM 657 515120 - 515134 + T 74 -7 -4.29187 | opp_overlap 515098 515120 515121, overlap 515118 515121 TCATCAGGCCATTAA CGCCGC ATA GCGGCA TGTTTTTTAATTGTG TERM 658 515121 - 515133 + T 74 -10.5 -3.15885 | opp_overlap 515098 515120 515121, overlap 515120 515118 CATCAGGCCATTAAC GCCGC ATA GCGGC ATGTTTTTTAATTGT TERM 659 515133 - 515121 - T 70 -10.5 -2.50113 | opp_overlap 515121 515120 515118, overlap 515098 515120 CATCAGGCCATTAAC GCCGC ATA GCGGC ATGTTTTTTAATTGT tesB 516001 - 515141 - | acyl-CoA thioesterase II TERM 660 515620 - 515643 + g 85 -4.4 -5.27779 | overlap 515604 515630 CTGACGGTAGTCCTT CCGGCCCGAC TGCC GTCGGCATGG TTTTTTGATGTTCAA TERM 661 516100 - 516086 - H 72 -5.7 -4.38712 | CCGATGGGTACAAAA GTCTG AATAA CAGAC CAATTCCAGGCAAAA STY0509 516216 - 516785 + | lipoprotein TERM 662 516797 - 516817 + T 100 -16.9 -3.14132 | opp_overlap 516787 516786 TTAATCCTGCGCCAA CCCTCTCCG TTA CGGAGAGGG TTAATACACCCAGCG ybaZ 517207 - 516818 - | putative methylated-DNA methyltransferase ylaB 518988 - 517438 - | hypothetical protein TERM 663 517981 - 518006 + g 80 -8.9 -4.15044 | GGTGTCGATGATTAG CCGGGTTAGCG GCTC CGTGAGCCCGG TTTGTTCAGCCAGCG TERM 664 518042 - 518031 - G 74 -3 -4.84359 | opp_overlap 518036 CCAGCGCGATAAAAA TTTC CGGC GAAA GGAAAGTGCCGTCCG rpmE2 519213 - 519473 + | 50S ribosomal protein L31 type B rpmJ 519479 - 519619 + | 50S ribosomal protein L36 TERM 665 519644 - 519667 + T 100 -10.3 -5.4505 | opp_overlap 519644 AGTTCAGGGAAAGCA GTGCGTACC AGGGAG GGTGCGCAC TTTTTTATTACCGGC STY0514 520145 - 519675 - | hypothetical protein maA 520814 - 520263 - | maltose O-acetyltransferase TERM 666 520759 - 520792 + g 100 -3.8 -5.95286 | overlap 520762 TCCTGGCATAAAGTT TCATCGGTCGGGCA ATACAG TGCCCCAGCGATCA TTTTTTGTTTTTCGT hha 521211 - 520993 - | hemolysin expression-modulating protein ybaJ 521613 - 521239 - | hypothetical protein TERM 667 522090 - 522075 - R 100 -11.8 -5.00616 | opp_overlap 522075 TTTTTGCGTAAAAAA GGCCGC TTGC GCGGCC TTATCAACAGTGAGC TERM 668 522075 - 522090 + r 82 -11.8 -3.30124 | opp_overlap 522075 TTTTTGCGTAAAAAA GGCCGC TTGC GCGGCC TTATCAACAGTGAGC acrB 525258 - 522109 - | acriflavin resistance protein B TERM 669 523039 - 523053 + g 76 -5.6 -4.77438 | opp_overlap 523038 GTCGCTAATAGACAC GCCCAG CGC CTGAGC TTTTTCCTGGTCGAT TERM 670 525132 - 525171 + g 74 -10.8 -3.57144 | overlap 525133 TTGCGGAGATCGTCA CTGCTGGTGGCGCAAT CGTCGGAT ATTGCGCTACCGGCAA TTTGAGGATCGCGAG TERM 671 525133 - 525170 + g 83 -14.3 -2.74144 | overlap 525132 TGCGGAGATCGTCAC TGCTGGTGGCGCAAT CGTCGGAT ATTGCGCTACCGGCA ATTTGAGGATCGCGA acrA 526474 - 525281 - | acriflavin resistance protein A precursor TERM 672 526445 - 526463 + g 90 -6 -5.17744 | opp_overlap 526441 CATCAGAACGACCGC CAGAGG CGTTAAC CCTCTG TTTTTGTTCATATGT TERM 673 527206 - 527186 - g 70 -3.1 -4.8236 | overlap 527188 GATTTAAAAAAAGAA GCTCGCGCC TAC GTCACGATC CTGCTGGAGATGTAT acrR 526616 - 527269 + | DNA-binding transcriptional repressor AcrR TERM 674 527275 - 527295 + F 72 -4.8 -4.61868 | gap 1, opp_overlap 527273 527275 527276, overlap 527275 527276 CTCCCCCTGATAATA T-TCCAGGA AAAC TCCTGGACA TTTTCTGTGTCGCTA TERM 675 528689 - 528672 - g 70 -5.5 -4.47183 | GATCAGCTAAATAAA CAGTTGG GTAA CCAGCTG ATGATGGCGATTAAC TERM 676 528758 - 528771 + G 74 -2.4 -5.08824 | opp_overlap 528753 AAATCTGAAAGCCAT TCTG ACGCAG CAGA TTTTTTGGGTGAACA TERM 677 528891 - 528904 + G 76 -3.1 -5.01732 | CAAAAAGCCTGGCCC GCAGT ATTT ATTGC TTTTTTGGCCGGGTT TERM 678 529230 - 529215 - g 73 -6.1 -4.40561 | opp_overlap 529216 529219, overlap 529217 GTGCTGGAAAAAGAA GGCGT GGCGAT ACGCC ATTTTGGTATGCCGG TERM 679 529219 - 529231 + G 84 -9.1 -4.34402 | opp_overlap 529215 529217, overlap 529216 TGGAAAAAGAAGGCG TGGCG ATA CGCCA TTTTGGTATGCCGGC STY0522 527388 - 530750 + | potassium efflux protein KefA STY0523 531715 - 530792 - | hypothetical protein TERM 680 531038 - 531056 + g 71 -8 -3.8901 | opp_overlap 531037 CAGTTGACGAATTAG CGCCCCGG GTT CTGCGGCG TTTCCTGCTTTCAAC ybaM 531952 - 531785 - | hypothetical protein ybaN 532562 - 532939 + | hypothetical protein TERM 681 532944 - 532933 - f 71 -3.6 -4.89562 | TGAAAAGCAACAAAA GCGC TGAA GCAC ACGAATCGCTGTTGC apt 533092 - 533643 + | adenine phosphoribosyltransferase TERM 682 533704 - 533680 - f 88 -14.3 -3.0094 | opp_overlap 533680 533683, overlap 533683 TTTTAGCCAGAGAGA CAACCTCGCTG TAT CGGCGAGGTTG TGTTAGCATTACCCT TERM 683 533680 - 533704 + F 100 -16.5 -3.09671 | opp_overlap 533680 533683, overlap 533683 TTTTAGCCAGAGAGA CAACCTCGCTG TAT CGGCGAGGTTG TGTTAGCATTACCCT TERM 684 533701 - 533683 - f 79 -10.2 -3.64912 | opp_overlap 533680 533683, overlap 533680 TAGCCAGAGAGACAA CCTCGCTG TAT CGGCGAGG TTGTGTTAGCATTAC TERM 685 533683 - 533701 + F 93 -12.4 -3.69069 | opp_overlap 533683 533680, overlap 533680 TAGCCAGAGAGACAA CCTCGCTG TAT CGGCGAGG TTGTGTTAGCATTAC TERM 686 535077 - 535050 - g 75 -11.2 -3.37016 | gap 1, opp_overlap 535052, overlap 535045 ACAAAAAAGAGTGAA CCGGCAGC-CGCA TCC CGCGCGCGGCCGG TGAATAACTCTGCGC TERM 687 535283 - 535270 - g 90 -5.2 -5.1861 | overlap 535271 TGGAGCATGAAAAAA CGCC GGAGCT GGCG GCTAAACTGGCGGCG TERM 688 535484 - 535466 - g 74 -6.7 -4.25104 | gap 1 CGGTGCGCAGCAAAA GCTG-GCG CAAG CGCTCAGC GATCTGACGGGAACG TERM 689 535601 - 535584 - g 74 -6.9 -4.24075 | opp_overlap 535584 ATTTATGAAGAGAAA CTCGCGC AAGC GCGTGAG TCAATTATCGCGGAT TERM 690 535662 - 535622 - g 73 -9 -3.7941 | gap 1, opp_overlap 535625 TATCGCGGATAATAA CATTCAGACGCTGCGTCGA TTCT TCGACGCCGAG-CTGGATG AAGAGAGTATCCGCC dnaX 533757 - 535685 + | DNA polymerase III subunits gamma and tau TERM 691 535686 - 535704 + F 73 -9.6 -3.30124 | ATCCGCCCCATTTGA TCGTAAGC CCG GCTTGCGA TTGTGAACCATCAAG TERM 692 535804 - 535792 - g 79 -3.4 -5.17353 | AGATGCAGGAAAAAA TGCA GAAAA TGCA GGAAGAGATTGCGCA ybaB 535731 - 536060 + | hypothetical protein TERM 693 536480 - 536469 - g 85 -4.4 -5.24129 | overlap 536470 536472 536473 TGGCGTCAGAAAAAA TCAG CGAG CTGA TCCTCGCGACCAACC recR 536060 - 536665 + | recombination protein RecR TERM 694 536694 - 536671 - f 100 -13.8 -4.1552 | TATTTTCTGAACAAA CGGAGGCGGC GTTC GCGGCCTCCG CTTGAAATCACACCC htpG 536752 - 538650 + | heat shock protein 90 TERM 695 538691 - 538711 + F 74 -11.1 -2.88788 | overlap 538690 538689 538693 CGACGCGAAGCGTCT TACCCGACC TAC GGGCGGGTA CTGTTTTGTGACTGC TERM 696 538793 - 538805 + F 70 -9.1 -3.30124 | overlap 538772 TGACTGCCGGATGGC GACGC GAA GCGTC TTATCCGGCCTACGG TERM 697 538906 - 538862 - f 73 -11.5 -2.73364 | opp_overlap 538851 538863 538895 538896 TGGCGACGCGAAGCA TCTTATCCGGCCTACGGAC GAGTACT GTTTGTAGGCCGGATAAGC GCCAGCGCCATCCGG TERM 698 538895 - 538923 + F 84 -5.2 -5.31877 | gap 1, opp_overlap 538862 538906, overlap 538896 CGAGTACTGTTTGTA GGCCGGATAAGCG CCAG CGCC-ATCCGGCA TTTTTTATAATACCT TERM 699 538896 - 538922 + F 72 -8.7 -3.78042 | gap 1, opp_overlap 538862 538906, overlap 538895 GAGTACTGTTTGTAG GCCGGATAAGCG CCAG CGCC-ATCCGGC ATTTTTTATAATACC adk 539066 - 539710 + | adenylate kinase TERM 700 539771 - 539729 - f 100 -17.9 -3.05384 | TTTTCGCGTAGTGAA CCGCTTATCAGGCCTGC CATTATCCC GCAGGCCTGATAAGCGT AGCGCCATCAGGCAA hemH 539940 - 540902 + | ferrochelatase aes 541870 - 540899 - | acetyl esterase TERM 701 541925 - 541907 - H 70 -2.3 -5.07053 | AACCATTGTAAAAAA CGCGGCT GGAGA AACTGCG ATCTCGTCGTCCGAT gsk 542023 - 543327 + | inosine-guanosine kinase ybaL 545052 - 543376 - | putative cation:proton antiport protein TERM 702 544221 - 544201 - G 89 -3.1 -5.65927 | opp_overlap 544215, overlap 544204 544213 GACGGAAACAAAAAA CAGGACGGC AAA GGCGTCGCG CAGTGGCAACGTATC TERM 703 544504 - 544521 + g 73 -5.5 -4.58395 | ATCGACTGCCAGCGA GGCTATG CCGA CATCGCC TTTTTCCACCATGCC TERM 704 544793 - 544737 - G 71 -10 -3.56092 | gap 1, overlap 544738 CCAGCACGGCGGAAA GCGCCATACCCAGCAGCGTCGCCACCG CTAT CTG-AGCGACAGCGCCGGGAATGGCGA TAGACTTTACCGCCA TERM 705 544792 - 544738 - G 79 -13.5 -2.73441 | gap 1, overlap 544737 CAGCACGGCGGAAAG CGCCATACCCAGCAGCGTCGCCACCG CTAT CTG-AGCGACAGCGCCGGGAATGGCG ATAGACTTTACCGCC fsr 546487 - 545267 - | fosmidomycin resistance protein TERM 706 545585 - 545573 - G 76 -10.5 -3.75845 | TAAAACAAGGGTAAA CGGCG CGA CGCCG AGAATAGAGCCCCAA TERM 707 545838 - 545848 + g 74 -6.8 -4.30448 | CGCGGCAGCGGGTTA GCGA TTA TCGC TTTTGGCTTGCCTTT TERM 708 547669 - 547648 - R 71 -9.5 -3.1268 | gap 1, overlap 547647 547651 GGATAACGGGAAAAG CGAGCGTGTA CTT TACACGC-CG GAAATCGCCGAAAAT TERM 709 547667 - 547651 - R 74 -10.9 -2.76291 | overlap 547648 547647 TAACGGGAAAAGCGA GCGTGTA CTT TACACGC CGGAAATCGCCGAAA TERM 710 548031 - 548021 - R 74 -8.2 -3.83998 | GTAGCGCAGATGAAA CCGG ACT CCGG CGCCTATCCACAGTT STY0541 548907 - 548428 - | hypothetical protein TERM 711 548643 - 548659 + g 75 -5.8 -4.56597 | GTTGCGCCACCATCG GGTCGG CCATA TCGACC TTTTTCGCGCCCAGA TERM 712 549082 - 549103 + r 93 -7.3 -5.65927 | overlap 549083 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTATTTCAATA TERM 713 549083 - 549102 + r 84 -10.8 -3.9793 | overlap 549082 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTATTTCAAT STY0542 549902 - 549108 - | hypothetical protein TERM 714 549961 - 549947 - R 95 -12.8 -4.36914 | opp_overlap 549960 GCGCGTTGGAGAAAA GGGCGC AAT GCGCCC TGACGGGACGTCAAC STY0543 550815 - 549979 - | hypothetical protein TERM 715 550836 - 550865 + r 70 -2.3 -4.9792 | opp_overlap 550845, overlap 550845 ACACATCCTTATGAT TCAAAAAAACATT ATAA AATGTTGTTTTTA TTTTTCTATAGGATG TERM 716 550856 - 550845 - R 82 -3 -5.48825 | opp_overlap 550845 550836 TATGATTCAAAAAAA CATT ATAA AATG TTGTTTTTATTTTTC TERM 717 550961 - 550932 - R 100 -18.1 -3.62597 | opp_overlap 550927 550936 CTGATGGCTTAATAA TATATCAGGCAGC TGAT GCTGCCTGATATA TACCCTTCATACTTC TERM 718 550936 - 550957 + r 87 -14.5 -2.92157 | opp_overlap 550932, overlap 550927 TGGCTTAATAATATA TCAGGCAGC TGAT GCTGCCTGA TATATACCCTTCATA ybaR 553670 - 551169 - | copper exporting ATPase TERM 719 552492 - 552527 + g 74 -4.5 -4.7254 | overlap 552494 GATGCTGCCGTCCTG GACGACGGTGCCGGC ATGAAC GCTGTCGCCTTCGCC TTTTTGCTGCGGAAT TERM 720 552638 - 552670 + g 76 -3.4 -5.04987 | gap 2, overlap 552653 TAGTGAGCCGCAGCA GCAT-CC-CTGGCTGA ACG TCCGCCAGCGGGACGC TTTTTTCGCCGTCTT TERM 721 553194 - 553205 + g 83 -7.2 -4.57073 | overlap 553148 TTCAATCGCCTCTGC GCCG TAGC CGGC TTTTTCCACCGCCTG TERM 722 553820 - 553808 - g 95 -5.5 -5.40474 | ATGTGGCGAAAAAAA CCGGT TTA ACCAG CAAAGCCATTCGGTT cueR 553780 - 554196 + | DNA-binding transcriptional regulator CueR STY0546 554649 - 554197 - | hypothetical protein STY0547 555563 - 554646 - | hypothetical protein STY0548 555710 - 556387 + | putative ABC transporter ATP-binding protein YbbL STY0549 556374 - 557153 + | hypothetical protein TERM 723 557283 - 557260 - T 73 -9.5 -3.30441 | CAGTAGCGCGTACAA CTGGCGGCG GTATTT CGACGCCAG CGCGTCGCCGGTGCC ybbN 558093 - 557239 - | thioredoxin-like protein TERM 724 557557 - 557576 + g 72 -3.6 -4.73388 | gap 1, opp_overlap 557549, overlap 557561 CTGATAACGGGTATC CTGATCCTG TAG CGGGAT-AG TTTTTAATACCGCTT ybbO 558923 - 558153 - | short chain dehydrogenase TERM 725 558831 - 558854 + g 70 -8.8 -3.75153 | AGGTTTGCGGCAGCC CGCCAGGATT TGAA AGCCCTGGCG TTTAAGTTCAAGCGC tesA 559692 - 559078 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 ybbA 559663 - 560349 + | putative ABC transporter ATP-binding protein YbbA TERM 726 561065 - 561081 + G 70 -8.7 -3.64049 | overlap 561053 561076 561077 ATCGCTCGAACGTTC GCAGCAG TTT TTGCTGC TTTCGGCGTTATTAA STY0554 560346 - 562760 + | hypothetical protein TERM 727 562777 - 562806 + F 75 -2.7 -5.14563 | opp_overlap 562778, overlap 562778 562780 TCATGATGTGAATAA TTTCGCGCTGGTT TTTA AAACGGCGCGTAC TTTTTTAGTCGCACA TERM 728 562780 - 562803 + F 70 -8.8 -3.41701 | opp_overlap 562778, overlap 562778 562777 TGATGTGAATAATTT CGCGCTGGTT TTTA AAACGGCGCG TACTTTTTTAGTCGC STY0556 562946 - 564079 + | outer membrane protein TERM 729 564092 - 564126 + F 71 -7.9 -3.84451 | gap 1 TAAAGCGTTTTCCTG TGCCGGATGTTGGCGT TAAG ACGTCT-TATCCGGCA TTTCCCTTTACGCCA TERM 730 565033 - 565015 - g 71 -7.4 -3.95535 | overlap 565013 AGAATCTGAAAAATA TCATTGCG GTA CGCAGTGA AGATGCCGATAAGCC sfbA 564336 - 565166 + | lipoprotein TERM 731 565286 - 565302 + G 81 -6.5 -4.6902 | overlap 565288 TGATGTGAGCCTGCA TATCGCC GCG GGCGAGA TTTTTGGCATTGTCG TERM 732 566173 - 566147 - g 71 -10.2 -3.29043 | gap 1 AACCGCGCCGCATAA TCCAACGGCGG TGGCGG CCGCCG-TGGA GCATATCCGTCAACG sfbB 565203 - 566219 + | ABC transporter ATP-binding protein TERM 733 566293 - 566312 + G 70 -3.4 -4.73912 | overlap 566297 566309 ACGGTGCTGGCGATT CTTGGCGG TCTA CCGCTCGG TTTTCTGATTTTTGT TERM 734 566309 - 566320 + G 72 -2.2 -4.83615 | overlap 566293 TTGGCGGTCTACCGC TCGG TTTT CTGA TTTTTGTCACCGATC TERM 735 566341 - 566357 + G 82 -5.1 -5.11389 | overlap 566343 GTCACCGATCGTCAT CTGTTCT GGC AGAACCG TTTTATTTATCTTGT TERM 736 566472 - 566514 + G 100 -13.3 -4.3739 | opp_overlap 566470, overlap 566474 GGGCAATACGATAGG CCCGATTGCAGCCTCCGTC CCGCT GTCGGTGGCCGCAATCGCG TTTTATGCACGCCTG TERM 737 566474 - 566512 + G 81 -14.5 -2.52946 | opp_overlap 566470, overlap 566472 GCAATACGATAGGCC CGATTGCAGCCTCCGTC CCGCT GTCGGTGGCCGCAATCG CGTTTTATGCACGCC sfbC 566212 - 566871 + | ABC transporter integral membrane protein ybbB 568004 - 566910 - | tRNA 2-selenouridine synthase TERM 738 566949 - 566972 + g 100 -11 -5.27923 | AACGTCTTGCCATGT GCCGCGAAAA ACGA TATTCGCGGC TTTTTTCTCCAGTTG STY0562 569000 - 568074 - | DNA-binding transcriptional activator AllS TERM 739 569733 - 569747 + H 71 -7.2 -4.12254 | opp_overlap 569733 569731 CCTTCTTGCATAAGA TGAACA TAT TGTTCA TTGTTTATGCTCATA allR 569787 - 570605 + | DNA-binding transcriptional repressor AllR TERM 740 570611 - 570632 + F 100 -10.1 -5.16472 | overlap 570612 TGTAGCCTGAGCCGC ATCCCGCTC GCTG GAGCGGGAC TTTTTTAAAATTTTT TERM 741 570612 - 570631 + F 100 -13.6 -3.67443 | overlap 570611 GTAGCCTGAGCCGCA TCCCGCTC GCTG GAGCGGGA CTTTTTTAAAATTTT gcl 570690 - 572471 + | glyoxylate carboligase hyi 572484 - 573260 + | hydroxypyruvate isomerase TERM 742 573844 - 573825 - g 74 -2 -5.0133 | overlap 573827 573828 CATCCTGGGAAAAAA TATCACCC TGGT GGGCGGCA ATGGGGATGGGCAAA garR 573361 - 574239 + | 2-hydroxy-3-oxopropionate reductase TERM 743 574245 - 574270 + F 78 -11.9 -3.01712 | opp_overlap 574243 ATTGTCCTAATTATG TGTATCGCTGC GGCT GCAGCGATACC TGTTCACAAGGAACA TERM 744 575542 - 575526 - g 76 -2.9 -5.01422 | overlap 575531 TTATATAAAAAGAAA GCAACGC AAC GTATTGC TTCAGCTTAAAAATA STY0568 574305 - 575552 + | metabolite transport protein TERM 745 577284 - 577269 - g 75 -6.1 -4.58395 | TCCAGGGCGGAAAAA TCGCC GCGATT GGCGA GAACCTGGGGGAAGC TERM 746 577796 - 577784 - g 73 -9.1 -3.85389 | GGCGAAGAAGCTAAA CGCGA AGG TCGCG TAACGGCGCATGATT TERM 747 578268 - 578291 + G 70 -3 -4.8048 | opp_overlap 578271 578272, overlap 578271 CGATGTTTGGCAAAT TAATGGCGAC CAAC GCCGCCGATA TTTTTGGTCTGAAAC allB 577181 - 578542 + | allantoinase TERM 748 578558 - 578578 + F 100 -16.9 -3.83378 | opp_overlap 578558, overlap 578551 TCCGGTGTGATTTAA TGCCCGTCG TCA CGACGGGCA TTCTCTATTTTAAGG TERM 749 578578 - 578558 - f 100 -16.9 -3.05384 | opp_overlap 578558 578551 TCCGGTGTGATTTAA TGCCCGTCG TCA CGACGGGCA TTCTCTATTTTAAGG TERM 750 578769 - 578783 + G 83 -10 -4.08767 | ACCACCGCGTTGGCC TGCCTG GTT CAGGCA TTTTGCGGCCATCGC STY0572 578601 - 579899 + | putative purine permease YbbY glxK 579922 - 581070 + | glycerate kinase II TERM 751 581101 - 581082 - T 100 -7.8 -5.71983 | overlap 581083 TTAAGTATAAAAAAA TCCACGGT TCTC ACCGTGGC AAAATCCAACATAGC TERM 752 581100 - 581083 - T 87 -11.3 -4.01563 | overlap 581082 TAAGTATAAAAAAAT CCACGGT TCTC ACCGTGG CAAAATCCAACATAG STY0574 581934 - 581149 - | hypothetical protein allC 583180 - 581945 - | allantoate amidohydrolase allD 584251 - 583202 - | ureidoglycolate dehydrogenase TERM 753 585336 - 585324 - g 70 -9.1 -3.73042 | opp_overlap 585323 585324, overlap 585322 GCGCGGATGAAAAGA GCCAG GTG CTGGC CTTTGTCTCCAAACC fdrA 584567 - 586231 + | membrane protein FdrA STY0578 586253 - 587500 + | hypothetical protein STY0579 587512 - 588321 + | hypothetical protein arcC 588325 - 589218 + | carbamate kinase TERM 754 589220 - 589257 + T 75 -6.3 -4.46233 | gap 3, opp_overlap 589243, overlap 589221 GCATCTGTCTGTGAT C-GCGACGGGCGGCGACA GAGAA TG-CGCCGCCCA-CGCTG TTTATTTAAGCTTAC TERM 755 589221 - 589255 + T 79 -10 -3.8323 | gap 2, opp_overlap 589243, overlap 589220 CATCTGTCTGTGATC GCGACGGGCGGCGACA GAGAA TG-CGCCGCCCA-CGC TGTTTATTTAAGCTT purK 590326 - 589259 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 756 590057 - 590074 + g 72 -2 -4.96848 | CGCGGTCGCGAGTCC CAGTTT ATCGAA AAGCTG TTTTTGTGTCAGACG purE 590832 - 590323 - | phosphoribosylaminoimidazole carboxylase catalytic subunit ybbF 591672 - 590950 - | UDP-2,3-diacylglucosamine hydrolase TERM 757 591104 - 591117 + g 74 -4.5 -4.81249 | overlap 591092 TGACCGTGAATCAGC CACTG TACG CGGTG TTTTTCCATTTCGGC TERM 758 591635 - 591602 - G 100 -11.1 -5.03314 | gap 1, opp_overlap 591611, overlap 591604 591611 TCTACGGCTAAAAAA CGCAGAAAACCGGCGA CGA TCGCCGGTTCT-TCCG TTTGCAGATGCAAGT TERM 759 591635 - 591604 - G 83 -14.6 -2.76422 | gap 1, opp_overlap 591611, overlap 591602 591611 TACGGCTAAAAAACG CAGAA-AACCGGCGA CGA TCGCCGGTTCTTCCG TTTGCAGATGCAAGT TERM 760 591611 - 591627 + g 93 -13.7 -3.77832 | opp_overlap 591602 591604 591611 AAAAAACGCAGAAAA CCGGCGA CGA TCGCCGG TTCTTCCGTTTGCAG TERM 761 591627 - 591611 - G 100 -13.7 -4.58242 | opp_overlap 591611, overlap 591602 591604 AAAAAACGCAGAAAA CCGGCGA CGA TCGCCGG TTCTTCCGTTTGCAG ppiB 592169 - 591675 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 762 591926 - 591936 + g 73 -5.4 -4.58283 | GCGCCATCGCCAGCG TACC ACG GGTA TTTTTCAGACCATTG cysS 592342 - 593727 + | cysteinyl-tRNA synthetase TERM 763 593747 - 593759 + T 70 -9.1 -3.30243 | opp_overlap 593747 593729 593728 CGTATTGCCGGATAA GACGC AGG GCGTC TTATCCGGCCTACCT ybcI 594366 - 593818 - | hypothetical protein ybcJ 594662 - 594450 - | hypothetical protein folD 595530 - 594664 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 764 594695 - 594709 + g 70 -7.1 -4.18494 | opp_overlap 594693 594697 TCGTGATATTCAATG CACGC CTGCA GCGTG TTTTCGATAAGCGTG TERM 765 596354 - 596344 - g 70 -6.8 -4.18494 | opp_overlap 596345 596350, overlap 596345 GACTGCGATCCAAAA GTGG CGG CCAC CGCTGCCGTGGCTTT TERM 766 596350 - 596366 + G 74 -7.9 -4.08706 | opp_overlap 596344 596345, overlap 596345 GATCCAAAAGTGGCG GCCACCG CTG CCGTGGC TTTCTCTGGTCAGGC fimA 596077 - 596631 + | type-1 fimbrial protein, a chain precursor fimC 597283 - 597975 + | fimbrial chaperone protein TERM 767 598156 - 598166 + G 70 -6.8 -4.11295 | overlap 598151 598162 TCGGCGGATACCGCG TCCG TGG CGGA TTTATCTCGCTTTGA fimD 598006 - 600618 + | outer membrane usher protein FimD precursor fimH 600633 - 601640 + | FimH protein precursor fimF 601650 - 602168 + | putative fimbrial protein fimZ 602846 - 602214 - | transcriptional regulator FimZ TERM 768 602328 - 602338 + g 73 -5.4 -4.67607 | opp_overlap 602328 GTTACTCAATAAAAG TTGC TCG GCAA TTTCTTTGTTAGACA fimY 604172 - 603450 - | fimbriae Y protein TERM 769 604155 - 604177 + g 72 -4 -4.76892 | GCGGTGTCTTTCCCT GCATGGTACG CTG CGCATCCTGC TTTTTCCATTGCTCT STY0599 604502 - 604191 - | hypothetical protein TERM 770 604272 - 604258 - G 71 -4.2 -4.63527 | opp_overlap 604258 GCACCAGCGTAAAAA GCAATG CCT CGTTGC TCTGATGTTTCAATG fimW 605260 - 604664 - | fimbriae w protein TERM 771 605150 - 605179 + g 88 -13.7 -3.33696 | overlap 605144 ATTATCTATCTCTTC TGGCGGCAGAAAG TCAA TTTTCTGCTGCCA TTGATTCGCCAGACG TERM 772 606091 - 606120 + r 82 -2.9 -5.60864 | gap 1 CTTTTGTCATTCATG GTTGCAGT-GAC CAATTGA GTCTACTGCGGC TTTTTTTAATATGTC STY0605 608400 - 606760 - | hypothetical protein gtrB 609319 - 608393 - | bactoprenol glucosyl transferase gtrA 609678 - 609316 - | bactoprenol-linked glucose translocase STY0609 610326 - 610081 - | copper-binding protein TERM 773 610568 - 610558 - R 73 -2.4 -5.10163 | AATGTCAAAATAAAA CGAG TAG CGCG TATCGGAGGTGACAG TERM 774 610845 - 610873 + r 79 -11.7 -3.15236 | opp_overlap 610837 GCATAATGTGTGTCG CCCGCCTGCGG CGTCAAA CTGTAGGCGGG TTCAGTATACGTTTA ykgD 611740 - 610886 - | araC family transcriptional regulator TERM 775 611123 - 611104 - G 70 -10 -3.35224 | gap 1, overlap 611102 ACACGTCGCGAAATA GCTGGGCGA AGC TCGCCC-GC GACATGTGTACCCGT ykgC 611956 - 613281 + | pyridine nucleotide-disulfide oxidoreductase TERM 776 613297 - 613313 + F 100 -9.4 -5.83822 | opp_overlap 613297 613294 AACATAAATAATGTA GCCCTG TTAAT CAGGGC TTTTTTTTGCCTGTC TERM 777 613478 - 613488 + G 77 -8.2 -4.11216 | CTTCATTATTGGCTG CGCC GCT GGCG TTTTCCGCCTCCGCC STY0613 613438 - 613674 + | hypothetical protein ykgB 613687 - 614247 + | hypothetical protein TERM 778 614271 - 614310 + T 77 -10.9 -3.19463 | gap 2, overlap 614277 TTACTCTCTTTATGC CGCGATTCGTCGGGTGGCG CTTG CGCCATCCGAC-AAT-GTG TTGATGAATGATGGA TERM 779 614277 - 614306 + T 90 -14.3 -3.13867 | overlap 614271 TCTTTATGCCGCGAT TCGTCGGGTGGCG CTTG CGCCATCCGACAA TGTGTTGATGAATGA STY0615 614766 - 614326 - | hypothetical protein TERM 780 614649 - 614670 + g 84 -3 -5.33026 | gap 1, overlap 614651 614652 GCCGCGCCTGATTAA GCTGTACCA TCATC TGGTGC-GC TTTTTCTTTCAATTC STY0616 615501 - 614791 - | hypothetical protein TERM 781 615970 - 616004 + G 78 -7.1 -4.66987 | gap 1, opp_overlap 615990, overlap 615972 CGGACTGTTTCTGGG CA-TCGGCCCGGCGAT TCAA ATGGCGGGGCCGGCTG TTTTGTTGGGCTATG TERM 782 616125 - 616138 + G 75 -3.7 -4.84359 | CCTGGAAATATTGGG GGCCG TTTG CGGGC TTTTTGTCGGGCTGG pheP 615827 - 617221 + | phenylalanine transporter TERM 783 617227 - 617258 + T 90 -16 -2.56596 | opp_overlap 617222, overlap 617223 GGCTCATTAACTTTT TTGCCCGATCCCAT GCTC ATGCGATCGGGCAA TCCATTAATGGCGCA ybdG 618510 - 617263 - | hypothetical protein TERM 784 617647 - 617664 + g 72 -4.1 -4.78107 | gap 1, opp_overlap 617632, overlap 617632 617648 CGGCTTTAACAGTTG C-GCGGTT AAC AGCCGCTG TTTTTCATCATCATC TERM 785 617648 - 617662 + g 71 -7.8 -4.00443 | opp_overlap 617632, overlap 617632 617647 GGCTTTAACAGTTGC GCGGTT AAC AGCCGC TGTTTTTCATCATCA TERM 786 618549 - 618528 - H 71 -8 -3.85698 | opp_overlap 618545 TCTCTCCTTTATAAA CAGCAGCC TATGAT GACTGCTG AATGGCATTTATGCA TERM 787 620482 - 620460 - g 71 -10.6 -3.3071 | overlap 620461 620479 620480 ATACCAGTACATCAA TGCGTTTTGG CGA CCAAAACGCC CATTCGCAGATGGGC TERM 788 620481 - 620461 - g 81 -14.1 -2.57944 | overlap 620460 620479 620480 TACCAGTACATCAAT GCGTTTTGG CGA CCAAAACGC CCATTCGCAGATGGG TERM 789 620498 - 620479 - g 71 -5.7 -4.25104 | opp_overlap 620487, overlap 620461 620460 620480 TTTTGGCGACCAAAA CGCCCAT TCGCAG ATGGGCA GCGTGGGTTGGCGTC apeE 618821 - 620791 + | outer membrane esterase TERM 790 621133 - 621116 - T 100 -12.7 -5.1361 | AGAAAGGTGAAAAAA GCCGGAC GGGC GTCCGGC TTAGGCAGGGGATTA nfnB 621799 - 621146 - | dihydropteridine reductase ybdF 622264 - 621896 - | hypothetical protein STY0622 622845 - 622264 - | TetR family transcriptional regulator TERM 791 622353 - 622321 - G 76 -12.1 -3.08813 | gap 1, opp_overlap 622320 622314 622337 TCCCAGCGCAATATA TTCGCCA-GCGCGA GCGGGA TCGCGCGCGGCGAA ATCCATTGTTGTTTC TERM 792 622407 - 622386 - G 72 -2.1 -4.84359 | gap 1, overlap 622387 622388 CCAGCGCCAGAAAAA GGCCGTCGCC GAA GGCG-CGGTA CTCATCCGACATAAA TERM 793 622887 - 622873 - H 80 -7.2 -4.57569 | overlap 622883 622886 TTATGTCTGTAAAAA CATGAT TGA ATCATG CCCGTTGTCGCGTCG TERM 794 623243 - 623257 + G 74 -2.7 -4.85599 | CGGGGTATTCCAAGT GGCAC CTGCA GCGCC TTTTTATGCAGTACA TERM 795 623349 - 623317 - g 86 -9.9 -4.29845 | gap 2 GAACGGAAGCTAAAA CTGG-CGGCG-CGCG ACCTG CGCGACACCGACCAG AAGGTGTATGATATT ramA 623134 - 623475 + | transcriptional activator RamA STY0625 623729 - 623481 - | hypothetical protein STY0626 624914 - 623796 - | carboxylate-amine ligase entD 625630 - 624926 - | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex fepA 627932 - 625677 - | outer membrane receptor FepA TERM 796 626589 - 626619 + g 77 -8.3 -4.07568 | overlap 626585 626582 626592 ACGTATCCCCGGCGT CAGCATGGTGCTG TCGGT CAGTTCCATGTTG TTTTCAGCAAACAGA TERM 797 627003 - 627017 + g 77 -7.8 -4.24963 | opp_overlap 627005, overlap 626994 GTAGTTCTGCCGATA GAGGCG GTT CGTCTC TTTTCCGTAATTATC fes 628121 - 629335 + | enterobactin/ferric enterobactin esterase ybdZ 629366 - 629584 + | hypothetical protein TERM 798 630215 - 630247 + G 72 -12 -2.55712 | gap 2, overlap 630214 630213 CGGCGTCAATGTCTG CCGCGC-CGTTG-CCG GGG CGGTCGGCGAGCGCGG ATATTCTGCGTATGA TERM 799 630943 - 630923 - g 75 -11.1 -3.41325 | opp_overlap 630942, overlap 630921 CACACCTTAATAATA CGGCGGTAA CGA TTCCCGCCG CCACGCTTAGCGATT TERM 800 630993 - 630983 - g 74 -2.4 -5.03715 | AGCAGGCGCAAAAAA CGCC AGA GGCT TCCGCGTTGGCAGAT TERM 801 631717 - 631735 + G 75 -6.7 -4.52589 | opp_overlap 631716, overlap 631699 631718 TCGGCTGGGAAAAGC TGCGCTT CCTTA AAGCGCG TTTTCTGTAGCGGCG TERM 802 633129 - 633115 - g 70 -7.1 -4.08064 | AACTGGCGGGGAAAA GAGGC GAATG GCCTC AATCCGGACGTATTG entF 629581 - 633465 + | enterobactin synthase subunit F TERM 803 633531 - 633505 - T 82 -11.1 -3.65084 | opp_overlap 633505 AATTAAATCCTGAAA CCCATAATAAT GACTA ATTATTATGGG TTTTTTATTGCAACT TERM 804 633505 - 633531 + T 100 -11.1 -5.45652 | opp_overlap 633505 AATTAAATCCTGAAA CCCATAATAAT GACTA ATTATTATGGG TTTTTTATTGCAACT TERM 805 634369 - 634355 - T 79 -7.8 -4.55128 | AGCTGGAAATCAAAA CCCGCT ACG AGCAGG AAAAGCTGGCGATGG TERM 806 634864 - 634883 + T 95 -12.2 -4.05389 | opp_overlap 634864 TGATTTACCCGAAAA GCCGGATA GCGA TATCCGGC TTTGTCATCTGTGTG TERM 807 634883 - 634864 - T 95 -12.2 -4.14739 | opp_overlap 634864 TGATTTACCCGAAAA GCCGGATA GCGA TATCCGGC TTTGTCATCTGTGTG fepC 635698 - 634904 - | iron-enterobactin transporter ATP-binding protein TERM 808 635105 - 635119 + g 75 -5.7 -4.62471 | GTCGTGCAGGACGGC GGCTA GCGTA TAGCC TTTTTCACGGTTGAG fepG 636684 - 635695 - | iron-enterobactin transporter permease TERM 809 636469 - 636453 - G 74 -4.3 -4.7078 | overlap 636442 636455 TCAACGACTGAAAAA TCGCGCC ACT GACGCCA AGCGCAGCGCCAATC fepD 637691 - 636684 - | iron-enterobactin transporter membrane protein TERM 810 637341 - 637331 - G 74 -6.8 -4.29432 | TAAATGCCATGAAAA GCTG TTC CAGC GGCGTGGAGAAACCA ybdA 637802 - 639046 + | enterobactin exporter EntS TERM 811 639101 - 639051 - T 71 -9.9 -3.14211 | gap 1, overlap 639053 ATGCTGGCTGATGAA GACGCGTTTATCCGACTGACCAAA TCTG TCTGGTCAGTCGGATAAG-ACTCC GATAAGGCTAAAACA TERM 812 639101 - 639053 - T 83 -13.4 -3.13403 | gap 1, overlap 639051 GCTGGCTGATGAAGA CGCGT-TTATCCGACTGACCAAA TCTG TCTGGTCAGTCGGATAAGACTCC GATAAGGCTAAAACA fepB 640065 - 639109 - | iron-enterobactin transporter periplasmic binding protein TERM 813 639701 - 639672 - G 77 -11.4 -3.60805 | gap 1 AGAGCTGATCGTAAA GCGCCAGC-GCGG AGTCG CCGCCGGTGGCGC TAATCAAAATGAGAT entC 640373 - 641548 + | isochorismate synthase TERM 814 642276 - 642293 + G 74 -4.7 -4.82901 | ACTACGCCATGAGTT CGCCGGG CGCG CTGGGCG TTTTTCTCGCCAAAG TERM 815 642768 - 642783 + G 74 -3.2 -4.87626 | opp_overlap 642761 642760 AACACAATGTCAGCG CCTTTG ACGC CAACGG TTTTTACTGTTCCGG TERM 816 643153 - 643133 - g 76 -5.4 -4.72201 | overlap 643136 GTCGATAAAAAACAA TTACGCCA GCGGT TGGCGTCA CGTTCACCGCTCTGA entE 641555 - 643168 + | enterobactin synthase subunit E entB 643182 - 644039 + | isochorismatase entA 644039 - 644794 + | 2,3-dihydroxybenzoate-2,3-dehydrogenase ybdB 644797 - 645210 + | hypothetical protein cstA 645392 - 647497 + | carbon starvation protein A TERM 817 647513 - 647539 + F 72 -9.4 -3.6502 | opp_overlap 647512 647514, overlap 647514 TCTTTTTTCATCAAT AGCCCTCTCC AGAATAA GGAGAGGGCG TTTGGATGACAGGTG TERM 818 647538 - 647514 - f 83 -12.9 -3.13403 | opp_overlap 647513 647514, overlap 647512 CTTTTTTCATCAATA GCCCTCTCC AGAATAA GGAGAGGGC GTTTGGATGACAGGT TERM 819 647514 - 647538 + F 82 -12.9 -2.78798 | opp_overlap 647514 647512, overlap 647513 CTTTTTTCATCAATA GCCCTCTCC AGAATAA GGAGAGGGC GTTTGGATGACAGGT STY0645 647561 - 647758 + | hypothetical protein ybdH 648882 - 647794 - | hypothetical protein TERM 820 648057 - 648069 + g 70 -3.4 -4.81249 | overlap 648066 CATAAGCCACTTTCG TTCC GTGCA GGAA TTTTTCCGTTTGCGG TERM 821 649842 - 649820 - g 76 -11.9 -3.01712 | opp_overlap 649818 CGTTTTGCGTCAATA CGCCGGCGC AACTG GCGCTGGCG GATATGCTGCGCGCC STY0647 649009 - 650169 + | putative aminotransferase STY0648 650787 - 650170 - | hypothetical protein TERM 822 650372 - 650391 + gT 71 -10 -3.19921 | overlap 650390 CGCGCGCGGTTATGC CGGATGGT TGCC GCCATCCG TTCGTGACGTTCTCT STY0649 651995 - 650760 - | hypothetical protein TERM 823 650965 - 650981 + gr 89 -2.9 -5.55769 | CCCTGCTGCGTCTGT GGAATGG TGT TCATGCC TTTTTTCTTATACCA TERM 824 651741 - 651730 - GR 74 -2.2 -5.10461 | GCGACCCAATAAAAA CGCT CAAT AACG TCCGCGTAGTATTCA TERM 825 652119 - 652103 - R 74 -8.1 -3.90588 | opp_overlap 652098 652095 652094 TATTCTCTAAGTAAA TACATTC TAC GAATGTA TACACTTAATTTATA ybdO 653063 - 652161 - | lysR family transcriptional regulator TERM 826 652354 - 652330 - G 77 -3.6 -5.00616 | gap 1, overlap 652337 GTTTGTGGTAAAAAA CCAATAAGCTC CGTG GAGCTGAT-GG AGTTGGCGATAGTCA dsbG 654126 - 653380 - | disulfide isomerase/thiol-disulfide oxidase TERM 827 654315 - 654335 + H 88 -12.6 -3.53224 | opp_overlap 654327 GCTATGGATTTCGAG TGGCAGGC AATAC GCCTGCCA TTTGCAAGACGAGTC TERM 828 654392 - 654410 + H 100 -16 -5.00138 | opp_overlap 654389 TAGTTCAGGTAATGG GGCCGCCT GTC AGGCGGCC TTTTTACTTTAGATG TERM 829 654455 - 654465 + H 72 -8.2 -3.81414 | GTGTTCACAATGTCG CCCG AAT CGGG TTGTTAGTTAACGCT TERM 830 654641 - 654619 - g 95 -10.6 -4.57569 | CCAGGCGTTCAAAAA CGGTGAATTC ATT GAAGTCACCG AGAAAGATACCGAAG ahpC 654566 - 655129 + | alkyl hydroperoxide reductase subunit C TERM 831 655266 - 655283 + F 95 -12.7 -4.05788 | AAATTGTTTCAGTCA TGGGCGC ATCC GCGCCCA TTTCATTTCAGCACC ahpF 655371 - 656936 + | alkyl hydroperoxide reductase F52A protein (subunit F) TERM 832 657076 - 657096 + F 100 -14.1 -5.4251 | opp_overlap 657076 ATCAATACTCTGAAA CCGTCTGTT AAT AACAGACGG TTTTTTGTCTATGGA TERM 833 657096 - 657076 - f 93 -14.1 -3.61328 | opp_overlap 657076 ATCAATACTCTGAAA CCGTCTGTT AAT AACAGACGG TTTTTTGTCTATGGA TERM 834 657133 - 657115 - f 100 -16 -4.18018 | opp_overlap 657105 TTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA 657246 - 657704 + | transposase for insertion sequence element IS200 TERM 835 657783 - 657807 + F 93 -9.9 -4.56978 | opp_overlap 657786, overlap 657785 657786 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTATTTCAACG TERM 836 657785 - 657805 + F 95 -12.5 -3.89033 | opp_overlap 657786, overlap 657783 657786 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTATTTCAA TERM 837 657786 - 657804 + F 93 -16 -2.92335 | opp_overlap 657786, overlap 657785 657783 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATTTCA TERM 838 657804 - 657786 - f 100 -16 -4.91109 | opp_overlap 657785 657783 657786 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATTTCA STY0658 657980 - 658462 + | hypothetical protein TERM 839 658556 - 658567 + G 80 -4.4 -5.00884 | TGAGACGGGACATCT GAAC AGAC GTTC TTTTTTAAAGGGGAT TERM 840 660009 - 659980 - g 73 -9.3 -3.90291 | gap 1, overlap 659990 AGTTCTTCAACGAAA CGGTGCAACACGCT GAT ATCGTGCTGC-CCG TTACCACCGCGTTTG TERM 841 660320 - 660285 - g 100 -9.7 -5.41143 | GACGGGCCAAAAAAA GCGATCCTGCCAAGC TCTGCC GCCTGGTACGATCGC AAGTTCAAAACGCCG TERM 842 660387 - 660377 - g 74 -4.6 -4.83169 | overlap 660378 ACTGGCGGAGAAAAA CGGC CAC ACCG CGCTGCCGGAATACA STY0659 658533 - 660812 + | molybdopterin-containing oxidoreductase catalytic subunit STY0660 660809 - 661366 + | molybdopterin-containing oxidoreductase iron-sulfur subunit STY0661 661366 - 662133 + | molybdopterin-containing oxidoreductase membrane anchor subunit TERM 843 662144 - 662184 + T 84 -8.2 -4.56597 | opp_overlap 662151, overlap 662145 662148 ACTAACGATGATGCA GTAAAAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTGTCAG TTTTTAGCCACCAGG TERM 844 662145 - 662183 + T 82 -11.7 -3.33744 | opp_overlap 662151, overlap 662144 662148 CTAACGATGATGCAG TAAAAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTGTCA GTTTTTAGCCACCAG TERM 845 662148 - 662180 + T 82 -13.4 -2.83903 | opp_overlap 662151, overlap 662145 662144 ACGATGATGCAGTAA AAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTG TCAGTTTTTAGCCAC TERM 846 662177 - 662151 - T 100 -20.2 -4.75372 | opp_overlap 662148 662145 662144 ATGATGCAGTAAAAA GCCCTGCCAGGC GTG ACCTGGCAGGGC GTGTCAGTTTTTAGC ybdQ 662629 - 662201 - | hypothetical protein TERM 847 663229 - 663206 - g 89 -3 -5.5112 | gap 1, opp_overlap 663212 663213 663213, overlap 663210 663211 GCGATGAATAAAAAA CAGATCCCGCC GCC GGCGGCG-CTG TTTGGTTATAGCCAT TERM 848 663771 - 663786 + G 87 -8.2 -4.64334 | overlap 663749 GCGTGGTCAGCGTGC CCGGCG TGTA TGCCGG TTTTATTCACGGCTT TERM 849 663855 - 663843 - g 74 -7.7 -4.14392 | opp_overlap 663843 GGCTAACTTTTAAAA TGGGT CAA ACCCA TGTTCACGCGTGGCT ybdR 662852 - 664090 + | zinc-dependant alcohol dehydrogenase TERM 850 664140 - 664121 - T 93 -12.2 -3.78067 | opp_overlap 664121 664123 664137 664139 AAGAGCTAACGGAAA GAGGATGC GCAG GCATCCTC TGTGTAAACGCATTA TERM 851 664121 - 664140 + T 79 -12.2 -2.87881 | opp_overlap 664121, overlap 664123 664137 664139 AAGAGCTAACGGAAA GAGGATGC GCAG GCATCCTC TGTGTAAACGCATTA rnk 664583 - 664173 - | nucleoside diphosphate kinase regulator TERM 852 664664 - 664642 - R 100 -12.7 -5.07652 | opp_overlap 664642 GGTCCCAAAAGAAAA CCCTCACCG TCTGG CGGCGAGGG TTTAACTCTCATGAT TERM 853 664642 - 664664 + r 86 -11.2 -3.72968 | opp_overlap 664642 GGTCCCAAAAGAAAA CCCTCACCGT CTG GCGGCGAGGG TTTAACTCTCATGAT rna 665624 - 664818 - | ribonuclease I TERM 854 665499 - 665488 - G 72 -3.6 -4.82901 | opp_overlap 665472 TGGCTTTGACAAAAA CCGG TTTG CCAG GAAAGCGCCAGCACA TERM 855 665677 - 665708 + r 80 -7.2 -4.63184 | opp_overlap 665680, overlap 665678 665680 TCATTTAATCATAAA AAATGCCGCTCAGG TGAA CCTGAACGGCATCA TTTTTAACCTACGTT TERM 856 665678 - 665707 + r 77 -10.7 -3.37188 | opp_overlap 665680, overlap 665677 665680 CATTTAATCATAAAA AATGCCGCTCAGG TGAA CCTGAACGGCATC ATTTTTAACCTACGT TERM 857 665705 - 665680 - R 100 -15.5 -5.37345 | opp_overlap 665678 665677 665680 TTTAATCATAAAAAA TGCCGCTCAGG TGAA CCTGAACGGCA TCATTTTTAACCTAC TERM 858 665680 - 665705 + r 83 -13.3 -3.25166 | opp_overlap 665680, overlap 665678 665677 TTTAATCATAAAAAA TGCCGCTCAGG TGAA CCTGAACGGCA TCATTTTTAACCTAC citT 667239 - 665734 - | citrate carrier TERM 859 666092 - 666037 - G 100 -15 -3.81488 | overlap 666034 GTGCGCGAAATAGAA TACCAGTACCAGTACCAGTACCAGTA CCAG TACCAGTACCAGTACCAGTACCAGTA CAATGACGGTTGCAT TERM 860 666676 - 666665 - G 71 -7.2 -4.05208 | overlap 666666 ATCCACATCAAATAA CCGC CGAT GCGG CGTGCGGAAGGATCG citG 668173 - 667277 - | triphosphoribosyl-dephospho-CoA synthase citX 668564 - 668145 - | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase TERM 861 668368 - 668356 - GR 70 -9.1 -3.32844 | opp_overlap 668364 CGCCCCAGTGGATAA CGCTG TTC CAGCG CGATGGTCGCCTGTT citF 670123 - 668594 - | citrate lyase alpha chain TERM 862 669238 - 669249 + g 75 -5.8 -4.66537 | opp_overlap 669228 669226 669225 AATTAGCCACAATGT TGCG GCTA CGCA TTTTGTCTTCCAGGA TERM 863 669400 - 669414 + g 72 -2.1 -4.90778 | gap 1, overlap 669399 669403 TAGTGGTCATGCGGG TC-GCG CCAG CGCCGA TTTTGTTTGCATCAC citE 671041 - 670133 - | citrate lyase beta chain TERM 864 670875 - 670885 + g 71 -4.6 -4.63527 | opp_overlap 670870 670872, overlap 670873 TGATATACCAGACGG CGCG CCG CGTG TTTTTCGCGTAATGC citD 671334 - 671038 - | citrate lyase subunit gamma TERM 865 671198 - 671178 - G 73 -8.9 -3.91897 | CGTCGTAGCGAGAAA GCACCTCCA GGA TGGTGGCGC GAATGGCCTCGCCAA citC 672356 - 671331 - | [citrate (pro-3S)-lyase] ligase dpiB 672791 - 674452 + | sensor kinase DpiB dpiA 674421 - 675101 + | two-component response regulator DpiA TERM 866 675145 - 675115 - T 73 -10.3 -3.02043 | AAGCCCGCTTTAAGA TGCCGGAGCGATG TTTTC CCTCGCCCCGGCT TACCGGCTATCAGCC dcuC 676540 - 675155 - | C4-dicarboxylate transporter DcuC TERM 867 675504 - 675484 - G 71 -10.5 -3.25111 | overlap 675482 TTAAAATCACTAAGA CCAGCATCA GAA TAATGCTGG CGGACCCAAAAGAAG TERM 868 676070 - 676048 - G 89 -13.4 -3.66178 | CCGGCGAAGCGCAAA TAGCCGCCGC CGC GCCGCGGCTA ATGCCGACGTTGACC TERM 869 676463 - 676453 - G 95 -8.2 -4.99043 | CGCCGACAAATAAAA CGCC AGT GGCG GAATATCCCTTAATG pagP 676919 - 677491 + | palmitoyl transferase for Lipid A TERM 870 677615 - 677651 + F 75 -9.5 -3.59508 | opp_overlap 677612 677614, overlap 677621 677637 CTGGACAAAATGCAT CACAATTGTTGTACTGG TAT CCGATACAGCATTTGTG TCTATTTTTCATGTA cspE 677679 - 677888 + | cold shock protein CspE TERM 871 677917 - 677933 + T 100 -10.8 -5.81032 | opp_overlap 677917 AGCAAGATTTCAAAA CCCGCC CTTTC GGCGGG TTTTTTTTGCGCTTA TERM 872 677933 - 677917 - T 90 -10.8 -4.20042 | opp_overlap 677917 AGCAAGATTTCAAAA CCCGCC CTTTC GGCGGG TTTTTTTTGCGCTTA ccrB 678329 - 677946 - | camphor resistance protein CrcB TERM 873 678582 - 678608 + H 80 -10 -3.86194 | overlap 678603 CTTGACCTGCCGATT CGCGCCGCGCAG CCG CTGGATGGCGCG TTTATGACGCGGCTT TERM 874 679294 - 679313 + H 74 -5.6 -4.72272 | gap 1, overlap 679296 TATTCTCAGGTTAAT CCGGC-GCG TTA CGCAGCCTG TTTTTAGTGAAGAAG tatE 679335 - 679538 + | twin arginine translocase protein E TERM 875 679573 - 679587 + T 100 -9.2 -6.11644 | opp_overlap 679573 CGCAGAGTAAAAAAA CCGGCG AGT TGCCGG TTTTTTTTTGCCTGA TERM 876 679587 - 679573 - T 100 -8.5 -5.58454 | opp_overlap 679573 CGCAGAGTAAAAAAA CCGGC GAGTT GCCGG TTTTTTTTTGCCTGA lipA 680590 - 679625 - | lipoyl synthase ybeF 681749 - 680796 - | putative DNA-binding transcriptional regulator lipB 682692 - 682051 - | lipoyltransferase ybeD 683055 - 682792 - | hypothetical protein TERM 877 683112 - 683082 - R 100 -13.5 -5.48825 | gap 1, opp_overlap 683088, overlap 683088 CATTACGTAAAAAAA TAACAACTCCCGCC ACAG GGCGGGAGTT-TTA CTGATGCATAGTATA TERM 878 683107 - 683088 - R 100 -15 -4.48073 | opp_overlap 683088, overlap 683082 GTAAAAAAATAACAA CTCCCGCC ACAG GGCGGGAG TTTTACTGATGCATA TERM 879 683088 - 683107 + r 100 -15 -4.3129 | opp_overlap 683088 683082 GTAAAAAAATAACAA CTCCCGCC ACAG GGCGGGAG TTTTACTGATGCATA dacA 684374 - 683163 - | D-alanyl-D-alanine carboxypeptidase fraction A TERM 880 684167 - 684183 + g 71 -4.4 -4.63218 | gap 1, opp_overlap 684160, overlap 684165 TCAGACTAGCCGGGT CG-CGAC GTTC GTCGGCG TTTTGTTCCGCCAGA rlpA 685646 - 684513 - | rare lipoprotein A TERM 881 684863 - 684842 - G 71 -10.1 -3.53444 | opp_overlap 684833 684831 684816 684842 TCACCGGCGCGGAAA CCGGCGC TGTCTGTG GCGCCGG CGTCGGTTCATTACC mrdB 686769 - 685657 - | cell wall shape-determining protein pbpA 688673 - 686772 - | penicillin-binding protein 2 TERM 882 687337 - 687350 + g 74 -2.3 -5.03747 | opp_overlap 687348, overlap 687348 ACCGGAATCGTATCG CCCTG ATAC CACGG TTTTTTAAAGCGTTT TERM 883 688073 - 688088 + g 72 -2.5 -4.85653 | gap 1, overlap 688070 688074 CGATGTCATGGGTGG C-GGCG TAGTT CGCCAG TTTGTTTTCTCTGTC TERM 884 688100 - 688116 + g 70 -8.7 -3.63843 | overlap 688101 688106 CCAGTTTGTTTTCTC TGTCGAG ACG CTCGACG TCTTTATCATTGATT TERM 885 688297 - 688310 + g 74 -2.3 -5.00616 | opp_overlap 688291 GAAGTAAAGCGATGG GATCG GGCG CGCTC TTTTTTAAAGGCGGC TERM 886 688614 - 688602 - G 78 -6.2 -4.80396 | CAAAATACCCAAAAA GGCG ACCAG CGCC CGACGCACAAACAGT ybeA 689171 - 688704 - | SPOUT methyltransferase superfamily protein ybeB 689492 - 689175 - | hypothetical protein TERM 887 689425 - 689452 + g 75 -7 -4.42386 | overlap 689426 TGAACATCTAAGGCG ATGATGTCCTGA CCTT TCAGGTCATCAA TTTTATCGATAACAA TERM 888 689426 - 689451 + g 71 -10.5 -3.2511 | overlap 689425 GAACATCTAAGGCGA TGATGTCCTGA CCTT TCAGGTCATCA ATTTTATCGATAACA TERM 889 689585 - 689597 + r 72 -10.5 -2.8655 | TTAACGCTAACCTTC CGGCG GGA CGCCG TGTAGTATACCTGAA TERM 890 689638 - 689650 + r 79 -10.5 -3.53761 | opp_overlap 689616 TACCGGGACTTATGT CGCCG GAT CGGCG TTTAAAACCAGATTA cobC 690429 - 689821 - | alpha-ribazole-5'-phosphate phosphatase TERM 891 690485 - 690506 + H 70 -2.3 -5.00616 | CCCCTGATTGCGCAA CGTTTTTTT CACT AAAATAGCG TTTTTTGGCCGGAGG TERM 892 691009 - 691023 + G 79 -11.4 -3.61894 | opp_overlap 690997 AATCCTACCGGCCTG CTGCCG GAG CGGCAG TTATTACAGGCCATT TERM 893 691355 - 691375 + G 76 -8.9 -3.92522 | overlap 691345 GGTTACGGGAGGAGG GCGCCCGGT TTT ATCAGGCGC TTTGTCAGCTTCCCC TERM 894 691455 - 691483 + G 84 -8.7 -4.28548 | GCGAGAGGATATTGA TCTGCAGCGACGG TTG CTGACGCAGCGGA TTTTAATCCGTAGCT cobD 690526 - 691620 + | threonine-phosphate decarboxylase nadD 692236 - 691595 - | nicotinic acid mononucleotide adenylyltransferase TERM 895 691938 - 691928 - G 81 -8.2 -4.30719 | opp_overlap 691931 691935 CTGGCCGATAATAAA CGCC AGC GGCG CTTCGGGGCCCTGTT holA 693269 - 692238 - | DNA polymerase III subunit delta TERM 896 693106 - 693080 - G 73 -5.9 -4.45083 | gap 1, overlap 693081 GGCAGAGTGAGAAAA GCGATCCCCAGT CGGT ACTGG-GATCGA GAGTAAAAGCGTGGT TERM 897 693244 - 693210 - G 78 -12.2 -3.19509 | gap 1, opp_overlap 693210 693211, overlap 693208 693206 693211 GCCCAATAATAGATA TGCCGCACGCAGCCC TTCGTT GAGCTGCGCGCGG-A GTTGTTCAGGATACA TERM 898 693244 - 693211 - G 78 -13.8 -2.51223 | opp_overlap 693210 693211, overlap 693210 693208 693206 CCCAATAATAGATAT GCCGCACGCAGCCC TTCGTT GAGCTGCGCGCGGA GTTGTTCAGGATACA rlpB 693859 - 693269 - | LPS-assembly lipoprotein RplB TERM 899 693306 - 693346 + g 76 -10.2 -3.74872 | overlap 693305 ACGCGTGCTGGCGTA GAGGCGGGCGCCGCCGTC TCATT GTCGGCGGTAGCCTCCTC TTTCGTCGCCTGAAT TERM 900 693374 - 693409 + g 74 -8.2 -3.98661 | opp_overlap 693363 AATATCCGCCGCGCG GACGCTGGCCAGCTTA CGAA TCAGCTGTTCAGCGGC TTTGTCGTACATCTC TERM 901 693628 - 693660 + g 75 -11.3 -3.3353 | overlap 693624 693632 AAATAGTCACCGTTC CAAGCCGCAGAGACG GAA CGTCTTTGCGCGTTG TGTCTTTATCAAGCA TERM 902 693632 - 693657 + g 80 -10.5 -3.80279 | gap 1, overlap 693628 693624 AGTCACCGTTCCAAG C-CGCAGAGACG GAA CGTCTTTGCGCG TTGTGTCTTTATCAA TERM 903 693801 - 693768 - G 84 -13.9 -3.05463 | ATCGTTTTCATTGAA GCCGGAACCTGCGTA GTGC TACGCAGATGCCAGC CGCATCCGGCGGTGA leuS 696456 - 693874 - | leucyl-tRNA synthetase TERM 904 695542 - 695553 + g 81 -3.6 -5.28778 | AATCGCTTTATAGCC GGTG TCGA CGCC TTTTTTCTCCATGGT TERM 905 695606 - 695646 + g 73 -5.2 -4.56597 | opp_overlap 695617, overlap 695607 695617 TTGGTGTTACGGCAT TCGTCGATGAACGCCGCC AGCTC GGCGTTGTTCGCCGCCGC TTTTTGCGCCAGCGG TERM 906 696111 - 696127 + g 76 -5.1 -4.8048 | opp_overlap 696111, overlap 696103 696101 AGTCATAGCCAAAAC CCAGC GTTTTGA GCTGG TTTTTCATGTACGCG STY0700 696693 - 697034 + | putative hydrolase N-terminus STY0701 697051 - 698223 + | putative hydrolase C-terminus TERM 907 698231 - 698252 + F 75 -10.1 -3.54653 | opp_overlap 698231 698232, overlap 698232 CGTTCTGATACCAAA TCGGGCAGC ACAA GCTGTCCGG TTATCTCCTGGGAAT TERM 908 698232 - 698251 + F 73 -11.4 -2.72471 | opp_overlap 698231 698232, overlap 698231 GTTCTGATACCAAAT CGGGCAGC ACAA GCTGTCCG GTTATCTCCTGGGAA TERM 909 698845 - 698866 + G 85 -4.3 -5.22039 | opp_overlap 698845 CAAGTTTCTTAAACA GGGCAGCGT GGTA ACGATTCCC TTTTTTGCCTTTGGG STY0702 698273 - 699226 + | 2-keto-3-deoxygluconate permease TERM 910 699252 - 699267 + F 95 -11.8 -3.85698 | opp_overlap 699250 699249 699247 699246 GAAAATAAATCACGA CGGGCG GTCT CGCCCG TTTATAAACCAACAG STY0703 699294 - 701222 + | putative sigma-54 dependent transcriptional regulator ybeL 701315 - 701788 + | hypothetical protein TERM 911 701801 - 701824 + T 82 -13.2 -3.05521 | gap 1 TAAGGTTCATTATCG TGAGCGGACGG TTG CCGTCCGC-CA TGTTAAGAGTGTAGT rihA 703174 - 702239 - | ribonucleoside hydrolase 1 TERM 912 702822 - 702843 + g 71 -4.3 -4.62336 | overlap 702824 GAGACGATGGTGACC GGCTGTGCG CTCT CGCGCAGTG TTTTTGCCATCAGCT TERM 913 702824 - 702841 + g 76 -9.1 -3.92746 | overlap 702822 GACGATGGTGACCGG CTGTGCG CTCT CGCGCAG TGTTTTTGCCATCAG gltL 704016 - 703291 - | glutamate/aspartate transport ATP-binding protein GltL gltK 704690 - 704016 - | glutamate/aspartate transport system permease protein GltK TERM 914 704091 - 704081 - G 72 -2.4 -4.92812 | TGATAACAAAATAAA CGGC GCC GGCG AACAGAATCATTTCG gltJ 705430 - 704690 - | glutamate/aspartate transport system permease protein GltJ TERM 915 705467 - 705451 - R 100 -12.3 -5.76949 | TACTCCGAAAAAAAA GGGTAGC AGC GCTACCC TCGAAGATTGTTGCC ybeJ 706516 - 705590 - | glutamate and aspartate transporter subunit TERM 916 706897 - 706913 + r 71 -3.7 -4.87133 | GCCTTATCCGGCCTA CATTGGA TAG TGCAATG TTTTATTTGCGGCGT lnt 708454 - 706916 - | apolipoprotein N-acyltransferase TERM 917 707013 - 707035 + g 76 -9.8 -3.84246 | opp_overlap 706984 706982 706979, overlap 707012 GTTCGTGCGTACGGC GTCAGGCCGG TGG TCGGCGTGAC TTTGGTAGTTAGCAC STY0712 709352 - 708474 - | haemolysin-related protein TERM 918 708701 - 708676 - G 71 -9.9 -3.53343 | gap 1 AAGTGGGTGCCGAAA GCGTC-ATTGAA GTC TTCAATCGACGC CAGCGCGCGAATCGT TERM 919 709292 - 709305 + g 75 -3.8 -4.946 | GCTGGCTGAGTAGCA GGGA AAAAAA TCCC TTTTTACTGTTTACT STY0714 709983 - 709510 - | putative metalloprotease ybeZ 711065 - 709980 - | PhoH-like ATP-binding protein TERM 920 711179 - 711147 - R 72 -4.8 -4.6955 | gap 1, overlap 711148 711149 GATGAAGAGAGAAAA TTG-CAAGGCCCGTC GGGC GACAGGCCATGACCA GGAAGCCCGACAGGC TERM 921 711209 - 711184 - R 83 -13.3 -3.23216 | gap 1, opp_overlap 711183 711184 711207 GGCCATGACCAGGAA GCCCGACAGGCG TAG CGCC-ATCGGGC ATTATTGCCTTTCCT TERM 922 711184 - 711209 + r 74 -11.1 -2.86619 | gap 1, opp_overlap 711184, overlap 711183 711207 GGCCATGACCAGGAA GCCCGACAGGCG TAG CGCCA-TCGGGC ATTATTGCCTTTCCT miaB 712697 - 711231 - | MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase)) TERM 923 713164 - 713131 - g 85 -12.5 -3.51365 | gap 1, overlap 713134 CTATATGGTAGAGAA CAACGTCCTGCAACAG GCG CTGTGGCAGG-CGCTG GAAGCGCACCCCGGC TERM 924 713161 - 713134 - g 80 -10.6 -3.88946 | gap 1, overlap 713131 TATGGTAGAGAACAA CGTCCTGCAACAG GCG CTGTGGCAGG-CG CTGGAAGCGCACCCC TERM 925 713415 - 713389 - g 86 -10.9 -4.14392 | gap 1, opp_overlap 713388 713389 CGTCAAGTGTGAAAA TGC-GCCAGGCG ACAG CACCTGGCAGCA GTTTACGCCAACGGG TERM 926 713428 - 713440 + G 71 -4.7 -4.62302 | overlap 713436 GCAGTTTACGCCAAC GGGGC CGC GCGCC TTTTTGCCGCTGTTC ubiF 712799 - 713974 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 927 714102 - 714075 - T 86 -13.6 -3.2362 | opp_overlap 714081, overlap 714081 GAATTGCCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTA AAAGTGGCTGGGGTA TERM 928 714096 - 714081 - T 100 -10.4 -5.1417 | opp_overlap 714081, overlap 714075 CCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTAAAAGTGGCT TERM 929 714081 - 714096 + T 93 -10.4 -4.60041 | opp_overlap 714081 714075 CCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTAAAAGTGGCT TERM 930 714887 - 714902 + T 83 -10.4 -3.82031 | opp_overlap 714887 GTTGCTATAAAAAAA GAGCCC CTAG GGGCTC TTTCGTCATCGTTAA TERM 931 714902 - 714887 - T 100 -10.4 -5.60993 | opp_overlap 714887 GTTGCTATAAAAAAA GAGCCC CTAG GGGCTC TTTCGTCATCGTTAA asnB 716583 - 714919 - | asparagine synthetase B TERM 932 715816 - 715836 + g 91 -6.8 -5.2189 | GGAGCGCTCCTGATC TTCGACGC GACGG GCGGCGAA TTTTTTGGTGATTGC TERM 933 715939 - 715954 + g 80 -5.4 -4.87665 | gap 1, overlap 715938 CACGGATTCTTCCAG CGC-CTG ACG CAGCGCG TTTTTGTCGGTGACG nagD 717625 - 716873 - | UMP phosphatase TERM 934 717125 - 717113 - G 73 -6.2 -4.52589 | opp_overlap 717117 TTTGCCGACATAAAA CGGC TTCCG GCCG GAAATTTTTTCAATG TERM 935 717500 - 717523 + g 87 -8 -4.58395 | TTGCGACGGGTAATT GGTCAGCAGC ACCA GCGGCAGACC TTTTTCCAGAATCCC nagC 718892 - 717672 - | N-acetylglucosamine repressor nagA 720051 - 718897 - | N-acetylglucosamine-6-phosphate deacetylase TERM 936 719256 - 719268 + g 70 -9.1 -3.66356 | CCAGACAAAGTTTGT CGCCT TTC AGGCG TTTGGCATTGCGAAT TERM 937 719428 - 719439 + g 77 -7.2 -4.35581 | opp_overlap 719421, overlap 719424 AAAGGTAATCCCGGC GCGG AAGC CCGC TTTTGCCTCTTTTAA TERM 938 720105 - 720073 - R 82 -7 -4.8048 | gap 1, overlap 720074 720077 CCCCGATATCAAAAA TTTACCGCCCCGC ATTGACTG GCGGGGCGG-AGA CAACATTACAGACCT TERM 939 720102 - 720077 - R 87 -14.7 -2.87672 | overlap 720073 720074 GATATCAAAAATTTA CCGCCCCGC ATTGACTG GCGGGGCGG AGACAACATTACAGA nagB 720911 - 720111 - | glucosamine-6-phosphate deaminase TERM 940 720143 - 720160 + g 74 -7.1 -4.37198 | opp_overlap 720145 TTTCTGCTTCTAATT CATTGAA ATAT TTCAATG TTTTAACTTTAAGTT TERM 941 721092 - 721112 + H 73 -7.7 -4.08394 | ACAAAAAACACCCGT TTAATTTGC GAG GCGAATTAA TTTTCCACACACTCT TERM 942 721211 - 721195 - H 100 -8.7 -5.58179 | overlap 721196 721208 CAGCACAATAAAAAA CGGCTTC AAA GAAGCCA TATCGGCGTCTCGTA TERM 943 721210 - 721196 - H 80 -10 -3.9328 | overlap 721195 721208 AGCACAATAAAAAAC GGCTTC AAA GAAGCC ATATCGGCGTCTCGT nagE 721238 - 723190 + | N-acetyl glucosamine specific PTS system components IIABC TERM 944 723249 - 723272 + F 100 -11 -5.75342 | gap 1, opp_overlap 723249 TCACAGGAAACATAA GCGGCAGAGGG AAA CCTTC-GCCGC TTTTTTTTACCGCAA TERM 945 723272 - 723249 - f 84 -10.2 -3.88438 | opp_overlap 723249 TCACAGGAAACATAA GCGGCAGAGG GAAA CCTTCGCCGC TTTTTTTTACCGCAA TERM 946 724296 - 724314 + G 74 -9.5 -3.724 | TTTCCGGTCTGCGCC GTCGCGG CTATA CCGCGGC TTCTATTCGTGAGTT TERM 947 724429 - 724417 - g 93 -10.5 -4.42639 | AGATCTGAACGAAAA CGCGC CGC GCGCG ATGGCGGTAATCGAT glnS 723401 - 725068 + | glutaminyl-tRNA synthetase TERM 948 725111 - 725127 + F 100 -11.5 -5.38951 | AAAATACCTTGTCAA CGCCGCG TTC TGCGGCG TTTTTTCTCTGCATT TERM 949 725600 - 725621 + G 75 -5.7 -4.57569 | overlap 725601 GGGGTGGATCGTTGT TCCGCAGGC GCAA GCCTCCGGC TTTTTCGACGACTCC ybfM 725520 - 726926 + | putative outer membrane protein STY0726 726976 - 727308 + | putative lipoprotein TERM 950 727325 - 727351 + T 100 -10.1 -5.07107 | overlap 727344 ACCCTGCCTTGCCAC CCACGGGCGAA TGTTT TCCGCCTGTGG TTTTTTCAGGCTTTA citA 728661 - 727357 - | citrate-proton symporter TERM 951 727931 - 727903 - G 90 -5.3 -5.18371 | gap 1 GGTGATAAAATAAAA CGTTG-TGGTGG TCATCG CCACCAGCAGCG TTCCGGCCGTAATAA TERM 952 728327 - 728290 - G 74 -9.8 -3.6279 | overlap 728291 AAATCCTTGTAATAA CCGGCCCAACAACACC AACGCA GGCGCTGCCAGGCCGA TCGTCTGGTAGCCGG citB 729851 - 728712 - | citrate utilization protein B STY0729 731241 - 729838 - | tricarballylate dehydrogenase TERM 953 729869 - 729882 + g 74 -9.5 -3.65991 | TGCGCCTCCTTGTGC GCCGC GCGA GCGGC TTCTATTCCCGCAAT TERM 954 730503 - 730487 - G 71 -10.1 -3.57674 | overlap 730485 ACGCGAGTACAAATA CCGCCGT CGT ACAGCGG CGCCCTGGCATCAAT TERM 955 730614 - 730604 - G 77 -8.2 -4.07687 | ACGCCCTGGTTAAAA CGCG TGC CGCG AATCAGGAAATTATC TERM 956 730641 - 730651 + g 81 -8.2 -4.36914 | opp_overlap 730628, overlap 730628 730627 TATCCGCGGGCCATT CGCC GCG GGCG TTTTCTCCCCAGGCC TERM 957 730890 - 730879 - G 90 -5.8 -5.24129 | overlap 730883 GCCGCCCATAAAAAA CGCA TTGG TGCG CGCAACGTGGAGCGC STY0730 732265 - 731339 - | LysR family transcriptional regulator TERM 958 731798 - 731817 + g 82 -5.6 -4.98672 | TTCTTCAAGGATCGG TCTGGCGC TCCA GCGCAGGA TTTTATCTTTTTGAA TERM 959 732361 - 732344 - R 100 -11.3 -5.39721 | opp_overlap 732344 GGAGGATATAAAAAA GCCAACC GGGC GGTTGGC TCTTCGAAAGATTTA TERM 960 732344 - 732361 + r 75 -11.3 -3.03635 | opp_overlap 732344 GGAGGATATAAAAAA GCCAACC GGGC GGTTGGC TCTTCGAAAGATTTA fur 732832 - 732380 - | ferric uptake regulator TERM 961 732954 - 732938 - R 75 -6.5 -4.55128 | ATGCCGAAATGAAAA CCGCAAG TCT CTCGCAG ATGTTAATAAAACTG fldA 733644 - 733114 - | flavodoxin FldA ybfE 734088 - 733795 - | LexA regulated protein TERM 962 734174 - 734210 + r 80 -6.4 -4.77157 | gap 1, opp_overlap 734168 734172, overlap 734174 734175 734177 AGCGAGGAAGCGACG C-CAACGCTCGCGCGCG TAAT CGCGCACAGGCGATGAG TTTTTAATCAGTTAG ybfF 734992 - 734222 - | hypothetical protein TERM 963 735443 - 735432 - g 100 -7.2 -5.31275 | opp_overlap 735432 735423 GCCGAGCAGAAAAAA GCGG TCAA CCGC TTTATGCTGATTCTG TERM 964 735432 - 735443 + G 71 -7.2 -4.03093 | opp_overlap 735432, overlap 735423 GCCGAGCAGAAAAAA GCGG TCAA CCGC TTTATGCTGATTCTG seqA 735177 - 735719 + | replication initiation regulator SeqA TERM 965 736153 - 736143 - g 85 -2.4 -5.55769 | overlap 736145 GTCCATAACAAAAAA GGCG GCC CGCT GGCAGATGGTATTGT pgm 735744 - 737384 + | phosphoglucomutase TERM 966 737390 - 737378 - T 78 -6.2 -4.7078 | CGAAGTATTGAAAAA CGCC TGATG GGCG ATATGGAAGAAAAAG TERM 967 737426 - 737399 - T 77 -11.4 -3.1247 | opp_overlap 737405, overlap 737405 ATGGGCGATATGGAA GAAAAAGGAGCC TTAC GGCTCCTTTTTT GTATTAACGGCGCTG TERM 968 737420 - 737405 - T 100 -10.4 -5.12068 | opp_overlap 737405, overlap 737399 GATATGGAAGAAAAA GGAGCC TTAC GGCTCC TTTTTTGTATTAACG TERM 969 737405 - 737420 + T 100 -10.4 -5.47159 | opp_overlap 737405 737399 GATATGGAAGAAAAA GGAGCC TTAC GGCTCC TTTTTTGTATTAACG TERM 970 737441 - 737484 + T 79 -10.4 -3.50045 | gap 1, opp_overlap 737461 TGTATTAACGGCGCT GCGC-TTATCAGGCCTGTA AACCGCC TCCAGGCCGGATAAGGCGC TTGTGATATCTGACT STY0737 737984 - 737499 - | 5-nitroimidazole antibiotic resistance TERM 971 738043 - 738013 - R 91 -11.1 -4.323 | gap 1, opp_overlap 738042, overlap 738014 TTCAAAGAGTGAAAA TGCCCGGGCTATCG TTAC CG-CAGCCCGGGCG CGCCATCAGCCGTGT TERM 972 738042 - 738014 - R 90 -14.6 -3.18657 | gap 1, overlap 738013 TCAAAGAGTGAAAAT GCCCGGGCTATCG TTAC CG-CAGCCCGGGC GCGCCATCAGCCGTG TERM 973 738042 - 738057 + r 70 -2.4 -4.91473 | opp_overlap 738013 TTACCGCAGCCCGGG CGCGCC ATCA GCCGTG TTTATTTTTCAATTC potE 739368 - 738049 - | putrescine transporter TERM 974 738206 - 738216 + g 74 -6.8 -4.30576 | opp_overlap 738206 AAGGCCACGAAGTTA GCGA CTT TCGC TTTTGATGATGGCAC TERM 975 740445 - 740456 + r 79 -3 -5.29782 | GCGCGATTGCCCTTT GATA TGGC TATC TTTTTTATGGATCTG TERM 976 740879 - 740865 - R 71 -7 -4.03234 | CGGTTTCCAGATAAA CTGGCG TTG CGCCCG CCTGCAATAATGCGC kdpE 742872 - 742195 - | DNA-binding transcriptional activator KdpE kdpD 745577 - 742869 - | sensor protein KdpD TERM 977 743035 - 743003 - G 76 -10.4 -3.63068 | opp_overlap 743002, overlap 742996 742993 743004 CGATAGCATGGCAAA TCGCCAGCCCCAGC CCCAC GCCGGGGACGGCGG ACTCTTTGTTGCCGC TERM 978 743034 - 743004 - G 79 -13.9 -2.7752 | opp_overlap 743002, overlap 742996 742993 743003 GATAGCATGGCAAAT CGCCAGCCCCAGC CCCAC GCCGGGGACGGCG GACTCTTTGTTGCCG TERM 979 744542 - 744514 - G 95 -14.5 -3.53563 | opp_overlap 744515 AGACGGTCGGCGAAA GCGTCACGTCGCC ACC AGCGTCGCGACGC CGGGCGGCCCATGAC TERM 980 744832 - 744842 + g 77 -4 -5.06414 | AAAATCGCATCGCGG GTAT GCC ATAC TTTTTCTTCGCCCGG TERM 981 744859 - 744877 + g 72 -11.7 -2.82516 | TTTTCTTCGCCCGGA TGCGCGC GCCAG GCGCGCA TCTGATCGTCCACGC TERM 982 745465 - 745498 + g 74 -4.5 -4.74103 | overlap 745466 GCCAGCATCGCCCAG GTTTTTCCGACGCCT GCGC AGGCGCCGAAGAAAA TTTTTAACTTCCCCC kdpC 746161 - 745574 - | potassium-transporting ATPase subunit C kdpB 747876 - 746167 - | potassium-transporting ATPase B chain TERM 983 746759 - 746794 + g 74 -11.1 -3.30441 | gap 1, opp_overlap 746752 746751 AGAAAATCGTCCACA CCGGCT-TCGGCGGCA ATCGC TGCCGCCGTCAGGCGG TTATCGCCAGTGATC TERM 984 747552 - 747571 + g 71 -4.9 -4.60924 | GGCGCGGGGCGCGCA GACGGCG AGCGAA CGCGGTC TTTTTCACCCCTTTC kdpA 749576 - 747897 - | potassium-transporting ATPase subunit A TERM 985 749651 - 749627 - H 76 -9.3 -3.72395 | opp_overlap 749632, overlap 749632 ATAACCTAAAAGTAA GAAAACCAGCA CGA TGCCGGTTATC ACGCCTGCACTCACA TERM 986 749646 - 749632 - H 84 -7.8 -4.89562 | opp_overlap 749632, overlap 749627 CTAAAAGTAAGAAAA CCAGCA CGA TGCCGG TTATCACGCCTGCAC TERM 987 749779 - 749768 - H 73 -2.2 -5.14894 | AAAAAAGTATAAAAA TGGC AAAG ACCA TTATTTAACTAATGA TERM 988 750172 - 750199 + G 70 -3.4 -4.71426 | gap 1, overlap 750174 TAAACCGGTATGGAT GGCGCAGGCTG AAAAAGC CA-CCTGCGAC TTTTATTAATCGCGA ybfA 750002 - 750208 + | hypothetical protein TERM 989 750249 - 750228 - f 80 -7.2 -4.60487 | opp_overlap 750235 GACCAGCCTGAAAAA CCGTCAGC CGCCAC GCTGGCGG TTTTTTTATGCGCCA TERM 990 750235 - 750249 + F 100 -11.4 -5.60993 | opp_overlap 750228 CTGAAAAACCGTCAG CCGCCA CGC TGGCGG TTTTTTTATGCGCCA TERM 991 750951 - 750939 - g 75 -6.2 -4.63218 | opp_overlap 750947 CCCGGTGGAAGAAAA CGCG GTCAT CGCG CAGCTACGTCATTTT phrB 750319 - 751740 + | deoxyribodipyrimidine photolyase TERM 992 751770 - 751745 - T 100 -16.9 -2.87463 | opp_overlap 751745, overlap 751733 751732 AAGGGGCGTGATACA GGCCCGGTAGC GCAA ACTACCGGGCC TTCTGCTATCAGGAT TERM 993 751745 - 751770 + T 100 -16.2 -3.4678 | opp_overlap 751733 751732 751745 AAGGGGCGTGATACA GGCCCGGTAG CGCAAA CTACCGGGCC TTCTGCTATCAGGAT STY0750 753260 - 751779 - | PTR2-family transport protein TERM 994 753297 - 753315 + H 74 -6 -4.56969 | overlap 753281 753283 CTGCGGCAAGAACGC GGCATTCT CAG ATAATGCC TTTCTTTGTGGGCTT STY0751 753589 - 754332 + | putative hydrolase-oxidase STY0752 754348 - 755004 + | hypothetical protein STY0753 754998 - 755930 + | hypothetical protein STY0754 755920 - 756654 + | hypothetical protein STY0755 756978 - 757109 + | hypothetical protein TERM 995 757227 - 757208 - g 70 -2.8 -4.74453 | gap 1, overlap 757209 GAAGAGATTGAAAAA CTG-CTGTC AGC GACCGACAG AATGCCCTTCCCGGA STY0756 757169 - 757735 + | DNA recombinase STY0757 757913 - 758248 + | hypothetical protein TERM 996 758453 - 758469 + G 74 -2.9 -4.93318 | opp_overlap 758446, overlap 758457 GCCATCAACCCAGCT TCTGCTG TGG CAACAGG TTTTTCTGCGTTATC TERM 997 758484 - 758496 + G 74 -2.6 -5.0133 | overlap 758472 GTTTTTCTGCGTTAT CCGC GGACA GTGG TTTTTTGCAGCAGTA STY0758 758250 - 758990 + | hypothetical protein TERM 998 759444 - 759456 + G 70 -2.7 -4.78107 | ATTATGGTGTACGTT TATGG TCC TCATA TTTTTCATACTGATA STY0759 759249 - 760343 + | UDP-galactopyranose mutase STY0760 760426 - 761319 + | putative glycosyl transferase STY0761 761332 - 762465 + | galactosyltransferase TERM 999 762937 - 762949 + F 72 -4.9 -4.58466 | ATCGGCAGTTTATGA TTATG TTG CATAA TTTTATCATTATACC STY0764 763368 - 764078 + | putative polysaccharide export ABC transporter ATP-binding protein TERM 1000 764695 - 764678 - f 71 -3.4 -4.78572 | TGTTAATTAATAAAA CACTCT TAACCC AGAGCG AATTTAAAGATCGTT STY0767 766138 - 766971 + | hypothetical protein STY0770 768519 - 768671 + | hypothetical protein nei 768705 - 769496 + | endonuclease VIII STY0772 770597 - 769551 - | hypothetical protein TERM 1001 769605 - 769588 - G 89 -9.1 -4.53303 | overlap 769589 TAGGTTGATATAAAA CGGGCCA CTGC TGGCCCA GTTAACAGAATGCTG TERM 1002 769604 - 769589 - G 73 -10.4 -3.315 | overlap 769588 AGGTTGATATAAAAC GGGCCA CTGC TGGCCC AGTTAACAGAATGCT TERM 1003 770730 - 770693 - R 81 -8.3 -4.55016 | opp_overlap 770697, overlap 770694 770697 AGAAAAAAGGGAAAA TGTACCGGATGGCGAGG GTTG CGTCGCCATCCGGTTGT CAATTAACGCTTCAG TERM 1004 770729 - 770694 - R 82 -11.8 -3.30569 | opp_overlap 770697, overlap 770693 770697 GAAAAAAGGGAAAAT GTACCGGATGGCGAGG GTTG CGTCGCCATCCGGTTG TCAATTAACGCTTCA TERM 1005 770697 - 770726 + r 100 -17.9 -3.42056 | opp_overlap 770694 770693 770697 AAAAGGGAAAATGTA CCGGATGGCGAGG GTTG CGTCGCCATCCGG TTGTCAATTAACGCT TERM 1006 770726 - 770697 - R 100 -17.9 -2.79535 | opp_overlap 770697, overlap 770694 770693 AAAAGGGAAAATGTA CCGGATGGCGAGG GTTG CGTCGCCATCCGG TTGTCAATTAACGCT gltA 772017 - 770734 - | type II citrate synthase TERM 1007 771980 - 771995 + g 77 -4.7 -4.85433 | AGTTCAATAGCAGTG TCACC AGTAAG GGTGA TTTTTGCCTTTGTAT STY0774 772118 - 772363 + | hypothetical protein TERM 1008 772371 - 772381 + F 80 -5.4 -4.9934 | CCCCATAACTTTTAC GCAT TAT ATGC TTTTTCTGGTGTTGT TERM 1009 772393 - 772405 + F 78 -4.9 -5.00923 | ATGCTTTTTCTGGTG TTGTT TGT AACAA TTTTGTTTAATGTTT sdhC 772772 - 773161 + | succinate dehydrogenase cytochrome b556 large membrane subunit sdhD 773155 - 773502 + | succinate dehydrogenase cytochrome b556 small membrane subunit TERM 1010 773912 - 773933 + G 71 -10.9 -3.18582 | gap 1 ACGTACCGCGGCGGC GGC-TGACCG TAC CGGTCACGCC TTGCTACATACGCTG TERM 1011 774232 - 774286 + G 81 -12.7 -3.09516 | gap 1, opp_overlap 774268 GGCAGTTCCACCCGA CCGGCATCGCCGGGGCGGGCGTGCTG GTGA CAGAAGG-CTGCCGCGGCGAAGGCGG TTACCTGCTGAACAA sdhA 773502 - 775268 + | succinate dehydrogenase flavoprotein subunit sdhB 775282 - 776001 + | succinate dehydrogenase iron-sulfur subunit TERM 1012 776328 - 776350 + F 74 -10.6 -3.25823 | opp_overlap 776318, overlap 776329 776331 AACAAGTGAACCCCG GCACGCATAC AGC GTATGCGTGG TTAGTATCCACGGCG TERM 1013 776329 - 776349 + F 83 -14.1 -2.55351 | opp_overlap 776318, overlap 776328 776331 ACAAGTGAACCCCGG CACGCATAC AGC GTATGCGTG GTTAGTATCCACGGC TERM 1014 776331 - 776347 + F 74 -10.9 -2.81547 | opp_overlap 776318, overlap 776329 776328 AAGTGAACCCCGGCA CGCATAC AGC GTATGCG TGGTTAGTATCCACG TERM 1015 777973 - 777963 - g 79 -3.2 -5.1417 | CCAGAAAATCAAAAA GCAT CCG ACGC CGCGTAAAATCTACG kgd 776527 - 779328 + | alpha-ketoglutarate decarboxylase sucB 779343 - 780551 + | dihydrolipoamide acetyltransferase TERM 1016 780910 - 780886 - g 74 -4.9 -4.77157 | overlap 780898 TGAAGGTAGTAAAAA GCAAAGAAGAG ATT CGCGCCTTTGC GGAAAACTGGCTGGG TERM 1017 781119 - 781098 - g 86 -7.9 -4.72846 | opp_overlap 781100, overlap 781100 GTAGAGATCGAAAAA GTTGCGGAG GAAA CCCCGCATC TGATCCATAAAGTCG TERM 1018 781764 - 781751 - g 74 -9.5 -3.73068 | TCTGGAAGGCAACAA CGCCG AACT CGGCG CGAAGAAACTGGCTG sucC 780693 - 781859 + | succinyl-CoA synthetase subunit beta sucD 781859 - 782728 + | succinyl-CoA synthetase subunit alpha TERM 1019 782748 - 782732 - f 85 -3.5 -5.56263 | overlap 782733 782734 ATTATAAAATAAAAA CTCGCTG TTC CTGCGGG AACAGATAAATGTCC TERM 1020 782779 - 782797 + F 100 -11.7 -5.4588 | GTTTTCGACATGGTT GGCCACC TTTAC GGTGGCC TTTTTTATGGTTTTA TERM 1021 784587 - 784614 + G 73 -9.2 -3.77607 | gap 1, overlap 784588 784603 ACTATGTTGGGGACA TCTTCGGTGCGCC GCT GGC-CATCGAAGG TTTGATGGCCTTCTT TERM 1022 784603 - 784624 + G 76 -10.9 -3.7282 | overlap 784588 784587 CTTCGGTGCGCCGCT GGCCATCGA AGGT TTGATGGCC TTCTTCCTCGAATCC cydA 784316 - 785884 + | cytochrome d ubiquinol oxidase subunit I cydB 785900 - 787039 + | cytochrome d ubiquinol oxidase subunit II STY0788 787054 - 787167 + | hypothetical protein TERM 1023 787333 - 787349 + G 71 -7.2 -3.97042 | opp_overlap 787333, overlap 787327 TGCGGTAATGGACAA GCGCCT CTTAA GGGCGC TTTCCTTCGTGATGG STY0789 787304 - 787585 + | hypothetical protein TERM 1024 787606 - 787631 + F 93 -9.1 -4.82154 | opp_overlap 787606 AAACCTCCTTAAAAA TATAGGGGCTT GCAT AAGCCCATATA TTTTTACTCTCCCTT TERM 1025 787631 - 787606 - f 89 -9.1 -4.58685 | opp_overlap 787606 AAACCTCCTTAAAAA TATAGGGGCTT GCAT AAGCCCATATA TTTTTACTCTCCCTT ybgC 787814 - 788218 + | acyl-CoA thioester hydrolase YbgC TERM 1026 788398 - 788438 + G 71 -11.2 -2.88544 | gap 1, opp_overlap 788398 TGGTCCGGAATCGAA CTATCGCGTCTGTACCAGG AAAG CCAGGGG-AGACGCGATAG TCTGTCGGGCTCGGA tolQ 788215 - 788907 + | colicin uptake protein TolQ tolR 788911 - 789339 + | colicin uptake protein TolR TERM 1027 789665 - 789652 - g 87 -8.1 -4.67556 | AGAAGAGCGTAAAAA GCTGC AACA GCAGC AAGCAGAGGAGCTGC TERM 1028 790077 - 790067 - g 83 -8.2 -4.45738 | GAGGCGAAGAAGAAA GCGG ATG CCGC GGCGGCGAAAGCAGC TERM 1029 790137 - 790112 - g 100 -13.2 -4.45738 | overlap 790127 790128 790129 GACGCTAAGAAGAAA GCGGCTGCCG AAAAAG CGGCCGCCGC AGAAGGCGTCGACGA TERM 1030 790137 - 790127 - g 87 -8.2 -4.56597 | overlap 790112 790128 790129 GCGGCTGCCGAAAAA GCGG CCG CCGC AGAAGGCGTCGACGA TERM 1031 790285 - 790268 - g 76 -12.7 -2.78715 | AACGGTGGGACGACA GGCGCTG ATAT CAGCGCC TACGCGAAACAGATT tolA 789404 - 790534 + | cell envelope integrity inner membrane protein TolA tolB 790658 - 791950 + | translocation protein TolB pal 791985 - 792509 + | peptidoglycan-associated outer membrane lipoprotein TERM 1032 792573 - 792589 + G 100 -15.1 -4.25104 | TTACTGGTTGGCATA GCGGCCC CCT GGGCCGC TTTTGCTCAGGCGCC TERM 1033 792845 - 792827 - g 83 -10.2 -3.9392 | GGGGAGTTTAAATAA TGGCGGCG CAG CGCAGCCA GCAGCTGGCGACCAG ybgF 792519 - 793307 + | hypothetical protein TERM 1034 793309 - 793356 + F 90 -14.3 -3.15579 | opp_overlap 793308 TTAACGCGATGTAAT GCGTACCATGCGACCAGAAAA CGCCTT TTTTCTGGTCGCGTCGTGCGA TTCCTAAGCAGTTGA TERM 1035 793601 - 793586 - f 72 -9 -3.52539 | overlap 793583 793600 GAACGTGAAGGATAA CGTTGC GTCA GCAACG GCCCGTAGGGCGAGG TERM 1036 794009 - 793977 - f 71 -9.9 -3.19463 | opp_overlap 793978 793986, overlap 793978 793986 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATATGGAA TERM 1037 793978 - 794008 + F 87 -14.9 -2.90763 | opp_overlap 793978 793977 793986, overlap 793986 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATATGGA TERM 1038 794008 - 793978 - f 80 -13.4 -2.51464 | opp_overlap 793978 793986, overlap 793977 793986 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATATGGA TERM 1039 793986 - 794000 + F 100 -8.5 -5.24989 | opp_overlap 793986 793978 793977, overlap 793978 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 1040 794000 - 793986 - f 100 -9.2 -5.17576 | opp_overlap 793978 793986, overlap 793978 793977 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 1041 794025 - 794051 + F 85 -13.8 -3.09834 | opp_overlap 794025, overlap 794027 794038 ATCTGCGATATGGAA GATTCGAACCTG CCG CAGGTTCGGGTC TTGCCTGATGCGCTG TERM 1042 794027 - 794049 + F 73 -10.6 -3.10796 | opp_overlap 794025, overlap 794025 794038 CTGCGATATGGAAGA TTCGAACCTG CCG CAGGTTCGGG TCTTGCCTGATGCGC nadA 794269 - 795312 + | quinolinate synthetase TERM 1043 796047 - 796017 - g 82 -11 -3.85698 | opp_overlap 796019 796022, overlap 796019 TCGCCTGTGGATAAA CAGCGCGCGGGAGC GAG GATCGCGCGCGCTT TCCCGTTAATGGTGA TERM 1044 796045 - 796019 - g 89 -13.6 -3.51934 | opp_overlap 796019 796022, overlap 796017 GCCTGTGGATAAACA GCGCGCGGGAGC GAG GATCGCGCGCGC TTTCCCGTTAATGGT TERM 1045 796019 - 796045 + G 89 -13.6 -3.68244 | opp_overlap 796019 796017, overlap 796022 GCCTGTGGATAAACA GCGCGCGGGAGC GAG GATCGCGCGCGC TTTCCCGTTAATGGT pnuC 795337 - 796056 + | pnuC protein ybgR 796991 - 796053 - | zinc transporter ZitB TERM 1046 797079 - 797062 - R 100 -11.3 -5.54907 | opp_overlap 797061 797060 CTGACAAAATAAAAA GGAGAGC GAAA GCTCTCC CGTTATCAGACTTTT STY0800 797488 - 797102 - | hypothetical protein TERM 1047 797669 - 797683 + H 79 -2.1 -5.54894 | gap 1 TTAGATCCCATTTTC CGCTAC ATTT GT-GCG TTTTTTTCCTGAATT aroG 797808 - 798860 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1048 798895 - 798879 - f 82 -11.5 -3.56092 | opp_overlap 798879 TCATTACGTCTTAAA CCGGCCC GCA AGGCCGG TTTTTTACTGGAAAC TERM 1049 798879 - 798895 + F 100 -10.8 -5.14563 | opp_overlap 798879 TCATTACGTCTTAAA CCGGCC CGCAA GGCCGG TTTTTTACTGGAAAC STY0802 799013 - 800092 + | ABC transporter permease STY0803 800092 - 800868 + | ABC transporter ATP-binding protein TERM 1050 800888 - 800933 + T 100 -18.6 -3.29511 | gap 1, opp_overlap 800929 TATTGCCTGATGGCG CTGCGCTTATCCGGCCTAC CCATTGCTC GTAGGCCGGATAAG-GCAG TTATACCGCCATCCG TERM 1051 800979 - 801005 + T 72 -8.6 -3.74747 | TCGCTTTACCCTGAT TCGCCACGGCAG CCG CTTTCGCGGCGA TTTCGTCAGCGTTAC gpmA 801711 - 800959 - | phosphoglyceromutase galM 802975 - 801935 - | aldose 1-epimerase galK 804117 - 802969 - | galactokinase galT 805166 - 804120 - | galactose-1-phosphate uridylyltransferase TERM 1052 804867 - 804837 - G 70 -5.3 -4.38712 | gap 1, overlap 804838 804840 804842 804845 GTGATCGGGAGAAAA GCAGATCACGCGGC TGGT GCCGCGCGCGCT-C TGACAGCGCATCAGC TERM 1053 804860 - 804845 - G 72 -11.8 -2.76909 | overlap 804842 804840 804837 804838 GAGAAAAGCAGATCA CGCGGC TGGT GCCGCG CGCGCTCTGACAGCG TERM 1054 805059 - 805076 + g 83 -9.8 -4.09685 | AGACGGCGTTTCCTG CGCCCC CTGCCA GGGGCG TTTTGCGCGATGCGG galE 806193 - 805177 - | UDP-galactose-4-epimerase TERM 1055 806386 - 806372 - R 100 -12.8 -5.44119 | TTTATCCGAAAAAAA GGCGCG TTA CGCGCC TGGGAATGAAACGGA STY0810 807324 - 806416 - | hypothetical protein TERM 1056 807453 - 807493 + r 73 -7.5 -4.08689 | opp_overlap 807466, overlap 807466 TCTTAATAAAAGGAG AGTGGTTCCAGAATGGCGC GCG GCGCCATTCTGATAATACA TTTAATTATTGCATC TERM 1057 807466 - 807480 + r 79 -11.4 -3.44794 | opp_overlap 807466, overlap 807453 AGAGTGGTTCCAGAA TGGCGC GCG GCGCCA TTCTGATAATACATT TERM 1058 807480 - 807466 - R 77 -11.4 -3.29263 | opp_overlap 807466 807453 AGAGTGGTTCCAGAA TGGCGC GCG GCGCCA TTCTGATAATACATT modF 808970 - 807495 - | putative molybdenum transport ATP-binding protein ModF TERM 1059 808422 - 808451 + g 95 -14.3 -3.61517 | CAGGGTCATACCCGC CTGGTTCAACGCC GTCA GGCGTTGTGCCAG TTGTTGACGGGCGGT modE 809826 - 809038 - | DNA-binding transcriptional regulator ModE TERM 1060 809344 - 809360 + g 74 -7.9 -4.13767 | overlap 809332 GCTTTGCGCCGTCAG CGCGACT TTG AGCCGCG TTTTGCCGTCGGCCA TERM 1061 809875 - 809864 - H 71 -7.2 -4.18494 | overlap 809865 TATTGTGACTGAAAA GCGC GTCA GCGC AAAGCCGACCGCACA ybhT 809955 - 810104 + | hypothetical protein TERM 1062 810132 - 810115 - f 75 -9.8 -3.54424 | opp_overlap 810115 GCTGATTTCCCCAAA CGCCCG CTCAGT CGGGCG TTTTTGTTACTCAAG TERM 1063 810115 - 810132 + F 100 -9.8 -5.1356 | opp_overlap 810115 GCTGATTTCCCCAAA CGCCCG CTCAGT CGGGCG TTTTTGTTACTCAAG TERM 1064 810566 - 810553 - g 85 -4.5 -5.26316 | overlap 810554 810555 GCAGCCGATAAAAAA GCGGT GGAT ACCAC GACGCGCGAAACATT modA 810271 - 811044 + | molybdate transporter periplasmic protein TERM 1065 811431 - 811449 + G 95 -8 -4.89852 | opp_overlap 811415 811426, overlap 811432 GCCGCCAGAACGCTG GGCGCCGG GCG CTGGCGCG TTTTTCTGACTATCA TERM 1066 811432 - 811448 + G 77 -11.5 -3.53188 | opp_overlap 811415 811426, overlap 811431 CCGCCAGAACGCTGG GCGCCGG GCG CTGGCGC GTTTTTCTGACTATC modB 811044 - 811733 + | molybdate ABC transporter permease protein modC 811736 - 812794 + | molybdate transporter ATP-binding protein ybhA 813613 - 812795 - | phosphotransferase TERM 1067 814043 - 814057 + G 83 -6.4 -4.84918 | GACCCATATTTCTAC CGATCA TCA TGGTCG TTTTGTCTTTGTCGG TERM 1068 814737 - 814719 - g 71 -4.5 -4.65895 | opp_overlap 814730 TTGCTGACGGAAAAA GGCCG TTATGCCGT CGGCC AGGGGCCAATGTGGG ybhE 813777 - 814772 + | 6-phosphogluconolactonase TERM 1069 814892 - 814858 - T 95 -13.5 -4.25104 | opp_overlap 814861, overlap 814859 814861 TCGCTTGCAGTAAAA CCACGGGCCGCCACA TCTGC TGCGGCGGCCCGTTT ATAAGCCTGAACCGG TERM 1070 814891 - 814859 - T 100 -17 -3.14848 | opp_overlap 814861, overlap 814858 814861 CGCTTGCAGTAAAAC CACGGGCCGCCACA TCTGC TGCGGCGGCCCGTT TATAAGCCTGAACCG TERM 1071 814861 - 814889 + T 100 -17.4 -3.87815 | opp_overlap 814859 814858 814861 CTTGCAGTAAAACCA CGGGCCGCCACA TCTGC TGCGGCGGCCCG TTTATAAGCCTGAAC TERM 1072 814889 - 814861 - T 100 -19.6 -3.13504 | opp_overlap 814861, overlap 814859 814858 CTTGCAGTAAAACCA CGGGCCGCCACA TCTGC TGCGGCGGCCCG TTTATAAGCCTGAAC ybhC 816199 - 814916 - | putative pectinesterase TERM 1073 817294 - 817312 + G 78 -2.3 -5.18371 | overlap 817260 CGGCGGTACTGTCGG CGTGTTG TTGCC CGGCGCG TTTTATTTTCTGCGC hutI 816437 - 817660 + | imidazolonepropionase TERM 1074 818181 - 818211 + G 85 -11 -4.04897 | overlap 818182 818191 GCCGTTTCGTCAACT GGCGCAGCTATGCG ACG CGCAGAGCCGCGCG TTTCATTATGCTTGT TERM 1075 818182 - 818210 + G 91 -14.5 -3.01854 | overlap 818181 818191 CCGTTTCGTCAACTG GCGCAGCTATGCG ACG CGCAGAGCCGCGC GTTTCATTATGCTTG hutG 817657 - 818598 + | formimidoylglutamase TERM 1076 819288 - 819300 + G 76 -9.1 -4.06419 | CGTCGTACAACCTGG TCCGC GTC GCGGA TTGTTTCTCACGCCC hutC 818643 - 819368 + | histidine utilization repressor TERM 1077 820294 - 820263 - g 71 -10.1 -3.60098 | gap 1, opp_overlap 820269 ACCCGCGAGGGGAAA GCCGTGTCCGTCGC CCTGT GCG-CGAACGCGGC GGATATCCTGCCGGA hutU 819564 - 821249 + | urocanate hydratase TERM 1078 821861 - 821873 + G 75 -6.9 -4.41348 | overlap 821862 AGGCGTCGACGGCCT TCGCG CTG CGCGG TTTGTTTGAGGCACA TERM 1079 822726 - 822762 + G 70 -6.5 -4.08939 | gap 1, overlap 822722 822726 GTGTGCGACGACGCT G-CTGGCGCAAGGCGC GTTACA GCGTCTGGTGCCGGAC TTTATGTGAATGTTG hutH 821251 - 822771 + | histidine ammonia-lyase TERM 1080 822799 - 822830 + T 74 -8.6 -3.86346 | opp_overlap 822811 GGCGCGGCACGTATT CGGCTTACCCAACC CGTT GGAAGGGTAAGACG TTTATGCCGCCATCC ybhB 823332 - 822856 - | putative kinase inhibitor protein bioA 824679 - 823390 - | adenosylmethionine--8-amino-7-oxononanoate transaminase bioB 824766 - 825806 + | biotin synthetase TERM 1081 825841 - 825871 + G 71 -11.1 -2.97747 | gap 1, opp_overlap 825819, overlap 825818 CGATGCGCTGACGGC GCGTCGG-GCGACG GATA CGTTGCGCCGCCGC TATGTGGTATCGCAG bioF 825803 - 826960 + | 8-amino-7-oxononanoate synthase TERM 1082 827045 - 827030 - g 71 -10.4 -3.19602 | opp_overlap 827024, overlap 827028 CTCTTTACAGCAACA CAGCGC GGAT GCGCTG CTGACGCTGTTGACA TERM 1083 827412 - 827435 + G 73 -5.2 -4.56597 | opp_overlap 827417, overlap 827414 GCATGGCAGGCCGTC GATAATCGCG CTCA CGCGAATAGC TTTTTGCCGGAAGAG bioC 826944 - 827699 + | biotin biosynthesis protein BioC bioD 827692 - 828378 + | dithiobiotin synthetase TERM 1084 828400 - 828423 + F 71 -7.4 -3.90744 | overlap 828402 TTAAAAACCGCCTTC TTGCAGGATC AGAC GATCCTGCTG TTCTTTCGCCAGACC TERM 1085 828402 - 828421 + F 88 -12.2 -3.54488 | overlap 828400 AAAAACCGCCTTCTT GCAGGATC AGAC GATCCTGC TGTTCTTTCGCCAGA TERM 1086 828856 - 828842 - f 71 -10 -3.28712 | opp_overlap 828841 828840 CTGGTCTGGGGATAA CCAGCA CAC TGCTGG AATTTTACCCCGCGA TERM 1087 829788 - 829768 - g 70 -6.7 -4.14739 | CTATCTATCCCAAAA CGCACTACG TGA CGCCGCGCG AGCGTATTCTGCAGG TERM 1088 829881 - 829865 - g 77 -8 -4.08557 | GCTGGCAAATAATAA GCTGCT TGAAG AGCAGC GATTAAGCCAGCGCA uvrB 829029 - 831050 + | excinuclease ABC subunit B TERM 1089 831068 - 831092 + F 87 -10.7 -4.17089 | ATGTGTCGATCGCCA GCGAGTCATCG TTA CCATGGCTCGC TTTTGAGAATTTCAG TERM 1090 831259 - 831222 - f 100 -16.6 -3.2653 | opp_overlap 831227, overlap 831227 TTAATCACAACTGAA GAAAATTAGCGTTGAG GCTGAA CCCAACGCTAATTTTC CCTCTCTCCTCGGCT TERM 1091 831254 - 831227 - f 100 -10.7 -4.73635 | opp_overlap 831227, overlap 831222 CACAACTGAAGAAAA TTAGCGTTGAG GCTGAA CCCAACGCTAA TTTTCCCTCTCTCCT TERM 1092 831227 - 831254 + F 83 -9.3 -4.26589 | gap 1, opp_overlap 831227 831222 CACAACTGAAGAAAA TTAGCGTTGAGG CTGAA CC-CAACGCTAA TTTTCCCTCTCTCCT STY0832 831359 - 831532 + | hypothetical protein TERM 1093 832095 - 832076 - T 75 -6.4 -4.40561 | overlap 832079 CTGCCTGAAAAATAA TAAGACGG AACT CCGTCTGA AAATATTAGGACTTA TERM 1094 832092 - 832079 - T 79 -8.1 -4.31587 | overlap 832076 CCTGAAAAATAATAA GACGG AACT CCGTC TGAAAATATTAGGAC TERM 1095 833521 - 833497 - T 74 -3.8 -5.05301 | gap 1 AAATAAGGATAAAAA TTGCTGAAAAT AGGG ATTTTCA-CAA ATGGTTTGCGCTGTG TERM 1096 833865 - 833838 - T 85 -13.6 -2.95894 | gap 1, opp_overlap 833838, overlap 833830 833864 CAGAAGAGGGAGAGA GCCTGTTTAC-CC TTC GGTGTAAACAGGC TTCTGATAAGCGCAG TERM 1097 833838 - 833865 + T 90 -13.6 -3.40403 | gap 1, opp_overlap 833838 833830 833864 CAGAAGAGGGAGAGA GCCTGTTTAC-CC TTC GGTGTAAACAGGC TTCTGATAAGCGCAG STY0835 834807 - 833899 - | hypothetical protein TERM 1098 834847 - 834833 - H 70 -10 -3.049 | GAAGTCAAATAAGCA GCGCTA CAG TAGCGC AAGTCGCGGGTTTTC TERM 1099 835875 - 835909 + G 79 -2.7 -5.24129 | gap 2 GCGCGGTTGGATCCA CCAGCTCCG--CCAGCG TAG CGATGGTCCGGCGCAGG TTTTTTGTCACCCCG moaA 835204 - 836193 + | molybdenum cofactor biosynthesis protein A moaB 836215 - 836727 + | molybdenum cofactor biosynthesis protein B TERM 1100 836763 - 836753 - g 77 -8.2 -4.09509 | ATTAACCCATATAAA CGCC GCA GGCG AAGCGCACATGGTGG moaC 836730 - 837215 + | molybdenum cofactor biosynthesis protein C moaD 837208 - 837453 + | molybdopterin synthase small subunit MoaE 837455 - 837907 + | molybdopterin synthase large subunit TERM 1101 838698 - 838680 - f 87 -10.3 -4.09864 | opp_overlap 838680 ATTGATCTCTTAAAA TCCTGGC CCTGC GCCAGGA TTTTTTTTAGGACTA TERM 1102 838680 - 838698 + F 100 -10.3 -5.76949 | opp_overlap 838680 ATTGATCTCTTAAAA TCCTGGC CCTGC GCCAGGA TTTTTTTTAGGACTA STY0843 838807 - 839514 + | hypothetical protein TERM 1103 839611 - 839641 + T 72 -6.3 -4.2558 | GTGAAGCTAAAGACG TCACTCG-CGCCATT AAA AATGGCGGTGAG-GA TTTTAATAAGAAATG TERM 1104 839862 - 839873 + T 73 -2.2 -5.252 | TTTTTCCCGCTTACA GATG AATA CGTC TTTTTTCTCAGCATA TERM 1105 839937 - 839911 - T 72 -5.9 -4.4009 | gap 1, opp_overlap 839911 TTTTACCGGATAAAA CGCGTTGT-GCT GGAA AGCGAAAACGCG TCTGCTTAAATTCAT ybhN 840911 - 839949 - | hypothetical protein ybhO 842152 - 840911 - | cardiolipin synthase 2 TERM 1106 841581 - 841595 + g 83 -7.8 -4.64676 | opp_overlap 841571 841568 AACAGCGCCTGCGCT TCGCCG GGG TGGCGA TTTTCTTCAGCCTGA TERM 1107 841971 - 842002 + g 77 -3.6 -5.0133 | overlap 841967 841973 TCGGCTTTTACGCCG CGCTGTGCAGCTTT TAGC AGAGCGGCATGGAG TTTTTTACCCACCTC ybhP 842907 - 842149 - | hypothetical protein TERM 1108 842334 - 842362 + g 74 -7.4 -4.08216 | gap 2, overlap 842334 842353 TGAATATCTCCTCCA GCCCGGCC-G-CGT TTA ACGGCGGGCCGGCC TTTTGCCGCCAGTCA TERM 1109 843049 - 843037 - H 70 -4.8 -4.46212 | overlap 843045 TGCTTCAGGAGAAAA GCCA TGAAG TGGC AACAACGCGTTCGTG TERM 1110 843350 - 843382 + G 85 -15.5 -2.65264 | overlap 843348 ATGTTTTACTGGCGC TGGCGGGGCTGGCTA TCC TGGCCGGGCCCGCCG TGGTCTCGCTACTGG STY0849 843040 - 843450 + | hypothetical protein STY0850 844518 - 843412 - | putative inner membrane protein TERM 1111 844584 - 844559 - R 74 -8.3 -3.9941 | gap 1, overlap 844560 844574 844575 GGCCTGATAAGCAAA GCGCATCAGGCA TAA TGCCGGATG-GC GGCGTGAGCGCCTTA STY0851 845764 - 844634 - | putative inner membrane protein TERM 1112 844886 - 844868 - G 72 -3.7 -4.75776 | opp_overlap 844874, overlap 844869 AATCGAAGGCAAAAA CGCGGCG TTCAG CGCCACC TGCGCGGCGTTAAAC ybhF 847493 - 845757 - | ABC transporter ATP-binding protein TERM 1113 846235 - 846223 - G 79 -3.3 -5.24531 | overlap 846224 846227 ACGCCGGAGAAAAAA CGCAG GTT CTGCT CAACCGTCAGGTTGC TERM 1114 846670 - 846680 + g 74 -2.4 -5.03314 | TGACGAATATCTGCT GCGG TCG CCTC TTTTTTCAGGATCAG TERM 1115 847151 - 847132 - G 71 -6.4 -4.23104 | opp_overlap 847132 GTAAACTCCAACAAA CGGGCAAA GGTC TTTTCCCG TATCTCGCCGGTAAC STY0853 848481 - 847486 - | hypothetical protein TERM 1116 847602 - 847616 + g 70 -7 -4.1196 | opp_overlap 847589, overlap 847595 847611 GATCGGTACGCAGAT CCGGCG TTT CGACGG TTTTCGGCGTAAATT ybiH 849155 - 848481 - | putative DNA-binding transcriptional regulator TERM 1117 850687 - 850672 - g 75 -6 -4.564 | AAGGCGAAACCAAAA CCGCGC ACAG GCGAGG GGAAACCCGCTGGCG rhlE 849385 - 850752 + | ATP-dependent RNA helicase RhlE TERM 1118 850796 - 850769 - T 78 -12 -3.03124 | gap 1, opp_overlap 850785 TTTTATCCGGCAACA TGCCCGGT-AGCG CGA CGCTTACCGGGCC TACGGACTATGCAAA TERM 1119 851206 - 851192 - T 76 -2.1 -5.27779 | GGGAAGAGCAAAAAA CACTG GTGGT CAGTA CCGCTAACGTGGCGT TERM 1120 852411 - 852400 - T 79 -2.2 -5.45802 | gap 1, opp_overlap 852401 852404, overlap 852401 GGCTTAAAAGAAAAA GCCGG CGA CCG-C TTTGTGGCGCTGGAT TERM 1121 852573 - 852559 - T 75 -2.8 -5.21709 | opp_overlap 852569 852570 CTGGAGAGCAAAAAA CATCAT GGT ATGCTG GTACTGTTCGCCAGC TERM 1122 853655 - 853635 - T 78 -6.7 -4.56597 | overlap 853637 CCGCCGCTGGAAAAA CAGCTAGCG ATG CGCTGGCGG ATGGGCGTGCGTAAC TERM 1123 853653 - 853637 - T 71 -7.9 -3.90048 | overlap 853635 GCCGCTGGAAAAACA GCTAGCG ATG CGCTGGC GGATGGGCGTGCGTA TERM 1124 854135 - 854114 - T 100 -13.7 -5.8187 | overlap 854093 TAGCGAATAAAAAAA GCCCGTCCA GTGG CGGACGGGC AAATAAGGGTAACAA ybiJ 854524 - 854264 - | hypothetical protein TERM 1125 854380 - 854415 + g 73 -6 -4.41844 | gap 1, overlap 854381 TAGCTTCCAGGCCAT CCAGCGTGGTGGC-GCC ATC GGCAGACACTACGCCGA TTTTATGCAGGTTTT STY0861 854651 - 854511 - | hypothetical protein TERM 1126 854822 - 854808 - R 80 -6.4 -4.86731 | opp_overlap 854808 854806 TTTCGGTAAAGAAAA GTCAGC GTA ACTGAC TGTCTTTTGAACCTC ybiI 855075 - 854809 - | hypothetical protein TERM 1127 855146 - 855134 - R 80 -5.5 -5.0538 | opp_overlap 855134 855132 CGTCAGGTGAAAAAA TCGCA TCG CGCGA TCTTTTCAGACCATG TERM 1128 855953 - 855967 + r 79 -9.2 -4.1552 | GAGCTATGGTGCGAA GGCGGC GAA GTCGCC TTTATTAAAAAAATG STY0865 858420 - 856198 - | hypothetical protein TERM 1129 856438 - 856413 - G 95 -14.1 -3.47349 | overlap 856406 TCGTTAAACCGACAA TACCGGCGAAC GTGG GTTCGCCGATA ATCAGCCCGCGAATA TERM 1130 857460 - 857472 + g 74 -3.3 -4.86385 | GACTTAATAAATGTT GCGTA ATC TCCGC TTTGTTTTTAAAGAT TERM 1131 857880 - 857857 - G 84 -8.8 -4.31433 | gap 1, overlap 857858 857859 CAGGTCGATAATAAA CGCGCCGGCGA TCA TCGCCGG-GAG CTGTAACCAGTTGCT TERM 1132 858160 - 858203 + g 72 -12.2 -2.73542 | CGTTTTCTCATCTTT GGCCGCAGGCGGGGCAAGCG CTGG CGCTGGCTCGGTCGGCGGCG TGGTTGAGGCTTCGC TERM 1133 858275 - 858288 + g 100 -3.7 -6.09888 | overlap 858274 858273 AGTACGTCAGCCAGG GCCGC ATAG GCCGC TTTTTTTTGTTCAGG TERM 1134 858416 - 858399 - G 84 -2.7 -5.39721 | gap 1, overlap 858400 CCAGTAGACAAAAAA GGATGAAC AGG GTCCA-CC GCATGACTCCTCCAG TERM 1135 858503 - 858534 + r 100 -16.6 -2.87211 | TGGGACTATTCCATG ATGCCCTTCCTGCC GCAG GGCAGGAAGGGCGA TATCTCAGGAGACGT glnQ 859261 - 858539 - | glutamine ABC transporter ATP-binding protein TERM 1136 858663 - 858675 + g 70 -9.1 -3.76224 | CGTGAGGCGACTTTT TCGGC AAA GCCGA TTTCGTGAGTGACAA glnP 859917 - 859258 - | glutamine ABC transporter permease protein TERM 1137 860048 - 860005 - R 73 -7.5 -4.18197 | gap 2, overlap 860007 860008 ATCCGTCACGGAAAA GAGCTGTAGGCCCGGTGAGCG TCCT CACT-ACCGGGCC-ACAAGCC AACATCAGGTCGTTT TERM 1138 860047 - 860007 - R 79 -9.9 -3.69216 | gap 3, overlap 860005 860008 CCGTCACGGAAAAGA GCT-GTAGGCCCGGTGAGCG TCCT CACT-ACCGGGCC-ACAAGC CAACATCAGGTCGTT glnH 860809 - 860063 - | glutamine ABC transporter periplasmic protein TERM 1139 860492 - 860512 + g 76 -3.2 -5.06451 | opp_overlap 860492 ACCGCTTTTGTAATA GCCATCGG AAAAG TCGATCGC TTTTTTACGCTCGTC TERM 1140 861149 - 861131 - R 76 -7.4 -4.19953 | opp_overlap 861131 TATTTAAGTGCAAAA CCCCTG TGCCAGG CAGGGG TATAGGGATGACTTA dps 861789 - 861286 - | DNA starvation/stationary phase protection protein Dps ybiF 862979 - 862092 - | threonine and homoserine efflux system TERM 1141 862447 - 862415 - G 71 -6.2 -4.2679 | overlap 862416 CAATCGGCACGAAAA TGATGGCGGTAATC AGCGA GCCTACCGCCACCG TGGCCGGACCATGTT TERM 1142 862637 - 862618 - G 74 -2.8 -4.9138 | gap 1, overlap 862622 ACGACCCAAATAAAA TC-TACCGG ACG CCGGGATGA AAACAGCGCGACCGC ompX 863334 - 863849 + | outer membrane protein X TERM 1143 863889 - 863872 - f 91 -8.4 -5.0925 | opp_overlap 863872, overlap 863866 GGTGAAAATGAAAAA TCCGCC TTTCGG GGCGGA TTTTTTTTGTCTATG TERM 1144 863872 - 863889 + F 100 -9.1 -6.06529 | opp_overlap 863872 863866 GGTGAAAATGAAAAA TCCGCCT TTCG GGGCGGA TTTTTTTTGTCTATG TERM 1145 863928 - 863910 - f 100 -16 -4.18018 | opp_overlap 863900 TTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA 864041 - 864499 + | transposase for insertion sequence element is200 TERM 1146 864578 - 864602 + T 87 -9.9 -4.20516 | opp_overlap 864581, overlap 864580 864581 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGCCTGAAAC TERM 1147 864580 - 864600 + T 93 -12.5 -3.70307 | opp_overlap 864581, overlap 864578 864581 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGCCTGAA TERM 1148 864599 - 864581 - T 100 -16 -4.91109 | opp_overlap 864580 864578 864581 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGCCTGA TERM 1149 864581 - 864599 + T 93 -16 -2.81702 | opp_overlap 864581, overlap 864580 864578 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGCCTGA ybiP 866203 - 864623 - | hypothetical protein TERM 1150 865689 - 865678 - G 86 -7.2 -4.74103 | TGGCGAAGCGAAAAA CCGG ATAG CCGG TATCAATAACCTTAA TERM 1151 865742 - 865708 - G 76 -5.5 -4.70626 | CAATAACCTTAAAAA CGCCGCCCCAGGCCA GATTT TGTACCGGCGCGACG AAAAATGCCGCGACG TERM 1152 866174 - 866140 - G 87 -13.4 -3.18433 | overlap 866138 866136 ACTGTAAAAAGTAGA GGCCCGCCCATGGGCT TAC AGCCCGACGACGGGCC AGAAGTGAATCGATA TERM 1153 866432 - 866406 - H 100 -8 -6.04378 | overlap 866409 866410 AAACCACAAAAAAAA CAGGGGAAATGG GCG CCATTTCCGTTG AGGATGCAAAATAAA TERM 1154 866428 - 866410 - H 76 -11.8 -2.59737 | overlap 866409 866406 CACAAAAAAAACAGG GGAAATGG GCG CCATTTCC GTTGAGGATGCAAAA TERM 1155 866467 - 866448 - H 82 -7.8 -4.6951 | opp_overlap 866448 866447 866444 AGGATGCAAAATAAA GCGGCG TACCGCAC CGCCGC GTTATTTCGTGGAAG STY0876 866783 - 867256 + | manganese transport regulator MntR TERM 1156 867872 - 867886 + G 76 -2.8 -5.06414 | overlap 867873 TGGTGTGGAGTTGCC TGGCAT TAT ATGTCG TTTTTCTTACCGCGC ybiR 867253 - 868365 + | hypothetical protein TERM 1157 868394 - 868368 - T 100 -19.6 -3.03243 | opp_overlap 868358 868354, overlap 868371 ACTGATGCCGTAAGA GAAGCCCGATAG TGT CTATCGGGCTTC GCAGGCAGAGTCTGT TERM 1158 868391 - 868371 - T 100 -15.5 -3.66288 | opp_overlap 868358 868354, overlap 868368 GATGCCGTAAGAGAA GCCCGATAG TGT CTATCGGGC TTCGCAGGCAGAGTC ybiS 869329 - 868409 - | hypothetical protein TERM 1159 868589 - 868612 + g 74 -7.4 -4.15106 | gap 1 CACCTCAATGTAACG GCTACCGTCCG GCT CGG-TGGTGGC TTTTACCGGTTCATC TERM 1160 868881 - 868891 + g 85 -4.6 -5.15969 | overlap 868878 GCCGTAGGCGTCCAG GTCG GAC CGGC TTTTTTACGTTCAAC TERM 1161 870714 - 870691 - g 74 -7.4 -4.10453 | overlap 870692 TAAATGGTCGGAAAA CGCGCGTATT GGTT ACTACGCGCA GGACCACGAATATGA ybiT 869549 - 871144 + | ABC transporter ATP-binding protein STY0880 872531 - 871266 - | hypothetical protein TERM 1162 871901 - 871862 - G 70 -9.9 -3.34398 | overlap 871860 CGTTGCCGTTAAACA CGCTGGCGAATACCTGC TGATAG GCTGGTAGCAGCCAGCG CTCCAGCGCGCCGGA STY0881 872793 - 873602 + | hypothetical protein TERM 1163 873624 - 873607 - T 77 -11.3 -3.14211 | opp_overlap 873609 ATCCCTTCTGATTAA CAGGCCT GCGT AGGCCTG TTAAGCGTAGCGCCA ybiW 876112 - 873680 - | putative formate acetyltransferase 3 TERM 1164 874364 - 874378 + g 80 -4.2 -5.00616 | TTGACCGATAACGCC CTGTTC GAA GACCAG TTTTTTCACGGCGGC TERM 1165 874770 - 874782 + g 76 -10.5 -3.64703 | CGATAACCCCATTTC CCGCC GAC GGCGG TTTCGATACAGCCGA ybiY 877017 - 876118 - | putative pyruvate formate-lyase 3 activating enzyme TERM 1166 877251 - 877269 + r 84 -10.2 -3.98915 | opp_overlap 877251 TTATCTGTTGATACA GCACGGCC ATA GACCGTGC TTTGGTATGTTTATC TERM 1167 877269 - 877251 - R 79 -12.4 -2.87564 | opp_overlap 877251 TTATCTGTTGATACA GCACGGCC ATA GACCGTGC TTTGGTATGTTTATC moeB 878044 - 877295 - | molybdopterin biosynthesis protein MoeB TERM 1168 877750 - 877787 + g 76 -10.5 -3.64703 | gap 1 TAATGGTAATATGCG GGTTGATTCGCGCCAGCG CGT CGCGGGCG-GACTCTACC TTTGGCTGCCCGACC moeA 879285 - 878044 - | molybdopterin biosynthesis protein MoeA ybiK 879483 - 880424 + | L-asparaginase TERM 1169 880462 - 880497 + G 74 -10.4 -3.53012 | opp_overlap 880493 GATGAACTGGATAGC CGCGATGTTCTGTCCG TCAG TGGCCTGAATATCGCG TTTCACCACGAAGGG TERM 1170 882073 - 882085 + G 71 -4.7 -4.59773 | overlap 882072 ATTGTTGAGATGGGG CCGCG GCG CGCCG TTTTTGAAAATCCGC STY0887 880435 - 882306 + | glutathione transporter ATP-binding protein TERM 1171 882570 - 882557 - g 78 -2.3 -5.17576 | CATGAAGGTAAAAAA CGTCC TGGC GGAAG GCTATACCGTTTCTG TERM 1172 883819 - 883846 + G 70 -9.1 -3.71649 | ACAGTAAAAATTTGA CCGGTTTCTGG ATTATG CCGGATACCGG TTTCAGCTTTGACGA yliB 882339 - 883877 + | putative ABC transporter periplasmic binding protein TERM 1173 884342 - 884355 + G 83 -8.1 -4.42464 | GGTAGGAATGACGCT TGCCG TGAC CGGCA TTTCTTTCCCGGCTT yliC 883938 - 884858 + | ABC transporter permease TERM 1174 885496 - 885530 + G 77 -4.3 -4.88918 | gap 1, overlap 885503 GACGATTTTGTTTAG CCACATCTTGCCGGGA ACGG TCTCGTCAAT-TGTGG TTTTCTTTACGATGC yliD 884861 - 885772 + | ABC transporter permease yliG 887188 - 885863 - | hypothetical protein TERM 1175 887643 - 887668 + G 70 -5.3 -4.50627 | gap 1 CGCGCTGCGCCGTGC CGAAGGCGCGCT TGC AGC-CGCCGCCG TTTGTTTAATGAGTG bssR 887419 - 887802 + | biofilm formation regulatory protein BssR TERM 1176 887824 - 887807 - f 88 -12.7 -3.63073 | opp_overlap 887807 CACAGGTCTGAATAA GGGGGAG GCGA CTCCCCC TTTTTACCGGACCGC TERM 1177 887807 - 887824 + F 100 -12.7 -4.56597 | opp_overlap 887807 CACAGGTCTGAATAA GGGGGAG GCGA CTCCCCC TTTTTACCGGACCGC TERM 1178 888443 - 888424 - g 86 -10.6 -4.17048 | opp_overlap 888423 888424 CCTGGGTGAAAATAA CCAGCGCG CTAC CGCGCAGG ATTTGGATAAATTAC yliI 887921 - 889042 + | putative oxidoreductase yliJ 889665 - 889039 - | glutathione s-transferase family protein TERM 1179 890699 - 890717 + G 77 -7.4 -4.2828 | CTGTCGTGCTGGGGG CGAAAACG GAC CGTATTCG TTTTAATGAGTCAGA dacC 889909 - 891111 + | D-alanyl-D-alanine carboxypeptidase fraction C TERM 1180 891159 - 891114 - T 71 -7 -4.07568 | gap 3, opp_overlap 891117 891117, overlap 891117 891118 TTGGTTCTCGTAAAA TAACC-C-CG-TTGCCGGGTGCG CGT CGCATCCGGCAAACCTGCGGTTA ATACATCAGAGTAAT deoR 891915 - 891157 - | DNA-binding transcriptional repressor DeoR TERM 1181 891311 - 891336 + g 74 -7.5 -4.07885 | opp_overlap 891308, overlap 891308 891313 891314 ACCACCAGTACATGG CTCTGGGCCAT TGTC ATGGCCCAATG TTTTACCGGCAGCTC TERM 1182 891313 - 891334 + g 70 -8.7 -3.63744 | opp_overlap 891308, overlap 891308 891311 891314 CACCAGTACATGGCT CTGGGCCAT TGTC ATGGCCCAA TGTTTTACCGGCAGC TERM 1183 891314 - 891333 + g 72 -12.2 -2.78032 | opp_overlap 891308, overlap 891308 891313 891311 ACCAGTACATGGCTC TGGGCCAT TGTC ATGGCCCA ATGTTTTACCGGCAG TERM 1184 891928 - 891973 + r 88 -5.5 -5.54264 | gap 1, opp_overlap 891936 891939, overlap 891936 891939 CATAGTTCCCCTGGA GAGTTAAAT-AAGCGCTCCGCA CCA TACAGAGCGCTTAATATTACTC TTTTTTTCGCTATTT TERM 1185 891964 - 891936 - R 100 -14.7 -3.70902 | opp_overlap 891928 891936 891939, overlap 891939 CCCTGGAGAGTTAAA TAAGCGCTCCGCA CCA TACAGAGCGCTTA ATATTACTCTTTTTT TERM 1186 891936 - 891964 + r 71 -10.3 -2.62118 | opp_overlap 891936 891939, overlap 891928 891939 CCCTGGAGAGTTAAA TAAGCGCTCCGCA CCA TACAGAGCGCTTA ATATTACTCTTTTTT TERM 1187 891961 - 891939 - R 95 -12 -3.98913 | opp_overlap 891936 891928 891939, overlap 891936 TGGAGAGTTAAATAA GCGCTCCGCA CCA TACAGAGCGC TTAATATTACTCTTT ybjG 892595 - 891987 - | undecaprenyl pyrophosphate phosphatase TERM 1188 892930 - 892956 + G 74 -2.9 -4.86133 | gap 1, opp_overlap 892927 ATCGTTTACAATCAG GCGGCAGGCTGG GACG TCAGGC-GCTGC TTTTTCCTCTCTGTC mdfA 892908 - 894140 + | multidrug translocase MdfA STY0900 895009 - 894194 - | hypothetical protein TERM 1189 894630 - 894640 + g 77 -8.2 -4.10161 | opp_overlap 894626 894629 CGATGATAATACATT GCCG CAA CGGC TTTTAACGCATCGTC TERM 1190 894665 - 894680 + g 86 -6.8 -5.00616 | ATCGTCGTACCGTTT CAGCGT GTAG GCGCTG TTTTTTCCACAGGCG STY0901 896217 - 895006 - | hypothetical protein TERM 1191 895685 - 895671 - G 72 -2.1 -4.8543 | gap 1, overlap 895672 895673 GAATGGCGATAAAAA TGGGCG CGAT CGCC-A CGGCAGCCGCGAGGA TERM 1192 896303 - 896322 + H 91 -8.6 -5.03314 | overlap 896302 TCATACTTCGTTGTG CAGACAGT TTTT GCTGTCTG TTTTTTCAGCGTAAG STY0902 896385 - 897005 + | TetR family transcriptional regulator STY0903 898807 - 897122 - | hypothetical protein TERM 1193 897705 - 897693 - G 75 -4.1 -4.90778 | opp_overlap 897693 TGGATCGAAATAAAA CCAAT GCG ATCGG CGATGGTTTTTACGC TERM 1194 897865 - 897875 + g 71 -4.6 -4.57341 | overlap 897849 897848 897850 897870 CGAGGCGGCGACCGA CCGC ATT GTGG TTTTTCACCACAATT STY0904 899078 - 899455 + | hypothetical protein TERM 1195 899483 - 899447 - T 84 -4.9 -5.41143 | overlap 899449 CACCGGCGAAAAAAA CGCCGATAGCGCCCTCC GGC AGAGGGCGTCGCCAGAG CAATCAGGCGAAAAG grxA 899750 - 899487 - | glutaredoxin 1 TERM 1196 900018 - 900057 + G 73 -10.7 -3.38604 | gap 1, overlap 900031 900035 GCTTAATCATTACCT TACGCT-GCCCGCGCCGT TCAAT ACGTCGCTGGCTGGCGTA TTGATGGTTTTCCTG ybjC 899920 - 900210 + | hypothetical protein nfsA 900194 - 900916 + | nitroreductase A TERM 1197 900926 - 900946 + F 73 -7.5 -4.19276 | CGCTAAAACCTGCGG GCCAGTGTA TGA TACGCGGGC TTTTCAGGGTTTTCA rimK 900974 - 901876 + | ribosomal protein S6 modification protein STY0909 901973 - 902449 + | hypothetical protein TERM 1198 902457 - 902497 + F 88 -3.4 -5.67967 | gap 2, opp_overlap 902463 902466, overlap 902467 902468 TTCACTGATCCCTCC CGATAATCAGGCAGTCGC TGCCAGC GCGGCTG-CTGTTTA-CG TTTTTTTATGCTGCT TERM 1199 903068 - 903086 + G 83 -7.3 -4.57569 | GCCAGTTTTCTTGAG CGCCAGC TCACC GCGGGCG TTTTTCAGCCGCTGG potF 902798 - 903910 + | putrescine ABC transporter periplasmic substrate-binding protein potG 903998 - 905131 + | putrescine transporter ATP-binding subunit TERM 1200 905868 - 905882 + G 74 -4.9 -4.82901 | opp_overlap 905855, overlap 905863 AAGGCGGAATCATCG CCGGC TCGAT GCTGG TTTTTATCCCGGCGG TERM 1201 905957 - 905971 + G 71 -4.2 -4.65895 | overlap 905958 ATCATGATTGGTCGC GTCCTG TGG CAGGAG TTTTTCAATAACCGC potH 905141 - 906094 + | putrescine ABC transporter membrane protein TERM 1202 906384 - 906399 + G 71 -7.6 -3.96148 | TGGACGATTTCGCGG CGCAAA CGGC TTTGCG TTTATGATCACCGCG potI 906091 - 906936 + | putrescine ABC transporter membrane protein TERM 1203 906966 - 906990 + F 71 -7 -4.07568 | overlap 906969 TCCACTATGGCAATG CGTTGCCGCG CGAGT CGCGGCATCA TTTTCAGGGAAGACA TERM 1204 906969 - 906987 + F 78 -11.7 -3.08032 | overlap 906966 ACTATGGCAATGCGT TGCCGCG CGAGT CGCGGCA TCATTTTCAGGGAAG TERM 1205 907204 - 907222 + G 81 -8.1 -4.23707 | overlap 907193 907192 AACCCTGGTCTTTCT GGCCAGC TTAGT GCTGGTC TTTATTGAAATTTAT STY0914 907010 - 907483 + | hypothetical protein rumB 907526 - 908653 + | 23S rRNA methyluridine methyltransferase TERM 1206 908712 - 908758 + F 86 -13.9 -3.12892 | opp_overlap 908714 908717, overlap 908714 908717 TTATCCATAAATAAT AATAACCATGATCGATCGATG AAAAA CTCCGATCGATCATGGTTATA TATTACCCTATTTTT TERM 1207 908714 - 908756 + F 100 -16.5 -3.10901 | opp_overlap 908714 908717, overlap 908712 908717 ATCCATAAATAATAA TAACCATGATCGATCGATG AAAAA CTCCGATCGATCATGGTTA TATATTACCCTATTT TERM 1208 908756 - 908714 - f 100 -18.7 -4.16305 | opp_overlap 908714 908712 908717, overlap 908717 ATCCATAAATAATAA TAACCATGATCGATCGATG AAAAA CTCCGATCGATCATGGTTA TATATTACCCTATTT TERM 1209 908753 - 908717 - f 100 -16 -4.18443 | opp_overlap 908717 908714 908712, overlap 908714 CATAAATAATAATAA CCATGATCGATCGATG AAAAA CTCCGATCGATCATGG TTATATATTACCCTA TERM 1210 908717 - 908753 + F 100 -13.8 -3.68738 | opp_overlap 908714 908717, overlap 908714 908712 CATAAATAATAATAA CCATGATCGATCGATG AAAAA CTCCGATCGATCATGG TTATATATTACCCTA STY0916 908730 - 908939 + | hypothetical protein ulaA 908948 - 910291 + | ascorbate-specific PTS system enzyme IIC STY0918 910323 - 910643 + | putative phosphotransferase enzyme II, B component TERM 1211 911101 - 911083 - g 77 -4.4 -4.96501 | TTCCACAAAAACAAA CCGGAGGC GGC GTTTCCGG GCTATGGCGTCATGA STY0919 910653 - 912140 + | sulfatase artJ 913090 - 912359 - | arginine-binding periplasmic protein 2 precursor TERM 1212 913234 - 913208 - R 100 -15.3 -5.68039 | opp_overlap 913206 913205 AAATGGATAAAAAAA GACGGACAAGT TAACC ACTTGTCCGTC GGGTTTATTCAATAT artM 913995 - 913327 - | arginine transporter permease subunit ArtM TERM 1213 913867 - 913837 - G 74 -8.3 -3.92542 | CGTACCGGTAAACAA CGTGATATAGCCG CGCAC CAGCCACACCACG AACGGCGTTTTTAGC artQ 914711 - 913995 - | arginine transporter permease subunit ArtQ artI 915449 - 914718 - | arginine-binding periplasmic protein 1 precursor artP 916195 - 915467 - | arginine transporter ATP-binding subunit TERM 1214 916383 - 916353 - R 71 -7.7 -3.97709 | gap 1, opp_overlap 916353 AGTAGGTAAGAAGAA TTGTC-GGCATCCC GTGC AGAATGCCAGACAA TTTACGGGGTTATGG STY0925 916939 - 916424 - | putative lipoprotein STY0926 917067 - 917390 + | hypothetical protein TERM 1215 917974 - 917989 + G 73 -5.4 -4.55287 | gap 1, overlap 917968 TGGCGCCTGGCCTGA CGCC-CA GCG TGTGGCG TTTTATCTGGCTGGA STY0927 917387 - 918217 + | putative N-acetylmuramoyl-L-alanine amidase STY0928 919227 - 918214 - | putative oxidoreductase STY0929 920756 - 919323 - | hypothetical protein TERM 1216 919843 - 919856 + g 86 -3.8 -5.40014 | TCGTAGCCCCAGTCG CTGG AGTTCA CCAG TTTTTCTTCTTCTTT ybjU 921768 - 920767 - | L-threonine aldolase TERM 1217 920910 - 920893 - G 73 -10.5 -3.34398 | opp_overlap 920892, overlap 920891 CCGTTCCCGCAAATA GCCGCCA AGCG CGGCGGC CTGTGCTTCGCCAAC TERM 1218 921113 - 921123 + g 71 -8.2 -3.86202 | overlap 921112 ACCATTTTACGCCAG CGCG TCG CGCG TTTAATGTAATCGCG poxB 923525 - 921807 - | pyruvate dehydrogenase TERM 1219 922921 - 922946 + g 76 -3.2 -5.09173 | overlap 922927 ATCAATGCGATATTG CTGGAGTAGC GCAGCA GTTGCGCCAG TTTTTTCAGCTCTTC TERM 1220 923356 - 923311 - G 83 -12.7 -3.25823 | opp_overlap 923330 923355 CCCGGTCCACATGAA CCGGCGCACACTGC-CAGCTC GCCGGT AAGCTGCGCT-TGTGCGCCGG CGGCGAAAGCGGCGA hcr 924654 - 923683 - | HCP oxidoreductase, NADH-dependent STY0933 926315 - 924663 - | hydroxylamine reductase TERM 1221 926121 - 926109 - G 85 -6.9 -4.83615 | overlap 926110 CAGCGTGGAGAAAAA CGCGC GCG GCGCA AAGTTATCAACGTCG STY0934 927358 - 926459 - | hypothetical protein TERM 1222 926758 - 926775 + g 73 -5.5 -4.60041 | opp_overlap 926754, overlap 926759 ACCAGCCGAAACCTG ACGCCAT CGCC ATGGCGG TTTTTAGCGGTAAGT TERM 1223 927198 - 927178 - G 84 -6.1 -4.99435 | CGGAATAATGAAAAA TCGCCACCA GAT TACTGGCGA GGTTATCCAAAAACG TERM 1224 927920 - 927944 + G 70 -5 -4.42386 | gap 1, overlap 927921 GCGAATGTGGCGCCG ATG-GCAGCGT GATG ACGCTGCGCAG TTTTCTCAATAGCGA TERM 1225 928035 - 928047 + G 80 -10.5 -3.87641 | overlap 928043 GCCAGTGCTACGTTT GCGCG ATG CGCGC TTTATGCGACGTATT TERM 1226 928338 - 928327 - g 71 -7.2 -3.93695 | CGGATGATCGACAAA CCGG GCAG CCGG TCGCATCGGGTGATC TERM 1227 928630 - 928665 + G 70 -9 -3.73224 | gap 1, opp_overlap 928638, overlap 928643 ACGGGCGGGTTAAGC GCGGAAGATGGACGGCG CAT CGCCTTTCATAT-CCGC TTTAATCGCGCGTCG TERM 1228 928643 - 928653 + G 71 -8.2 -3.85114 | opp_overlap 928638, overlap 928630 GCGCGGAAGATGGAC GGCG CAT CGCC TTTCATATCCGCTTT STY0935 927559 - 929217 + | hypothetical protein ybjX 930164 - 929214 - | putative virK protein TERM 1229 929269 - 929288 + g 85 -4.2 -5.14965 | gap 1 TCGAGTAATGCATAG CGGCGGCGA TAC TCGGC-CCG TTTTTTACTGGCGAT TERM 1230 930709 - 930681 - g 76 -10.3 -3.64822 | AGCCGCTGAGTTAAA GCTGGCGCG GGTTACGCTGG CGCGCCAGC AGCAGTTAGCTAAGA ybjY 930310 - 931428 + | macrolide transporter subunit MacA TERM 1231 933260 - 933275 + G 80 -4.6 -5.0916 | overlap 933261 CGGTTTTTCACTGAC AGCGCT GGCG AGCGCG TTTTTATGTTCGACG ybjZ 931425 - 933371 + | macrolide transporter ATP-binding /permease protein TERM 1232 933464 - 933444 - T 100 -12.6 -5.27335 | opp_overlap 933444 933461 GGCGTTAAATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTCTGGAT TERM 1233 933444 - 933464 + T 95 -12.6 -4.32482 | opp_overlap 933444, overlap 933461 GGCGTTAAATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTCTGGAT cspD 933722 - 933501 - | cold shock-like protein CspD TERM 1234 933575 - 933593 + g 70 -8.8 -3.63305 | opp_overlap 933576, overlap 933576 CCTGGTGGACATCAA ACCGGACA GAC TGTCCGGC TTTAAGCGTTCTGTA TERM 1235 933576 - 933592 + g 72 -12.3 -2.77501 | opp_overlap 933576, overlap 933575 CTGGTGGACATCAAA CCGGACA GAC TGTCCGG CTTTAAGCGTTCTGT TERM 1236 933592 - 933576 - G 86 -12.3 -3.83026 | opp_overlap 933575 933576 CTGGTGGACATCAAA CCGGACA GAC TGTCCGG CTTTAAGCGTTCTGT TERM 1237 934158 - 934168 + G 75 -6.8 -4.45738 | opp_overlap 934158 TCAATGATGACTACA CTCC GAT GGAG TTTGTTATTGACGTG clpS 934046 - 934366 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1238 935069 - 935058 - g 74 -7.2 -4.07568 | CCGGCGTCGGCAAAA CGGC GATT GCCG AAGGGCTGGCCTGGC TERM 1239 935337 - 935321 - g 73 -9.4 -3.7795 | GCAAATCTGATTAAA CCGCTG CTTTC CAGCGG CAAGATCCGGGTGAT clpA 934397 - 936673 + | ATP-dependent Clp protease ATP-binding subunit TERM 1240 936697 - 936714 + T 100 -9.8 -5.60993 | opp_overlap 936697 TCACTGCCGTACAAA CCGGGC CTTAGC GCCCGG TTTTTTTATGCCGGC TERM 1241 936714 - 936697 - T 80 -9.8 -3.86346 | opp_overlap 936697 TCACTGCCGTACAAA CCGGGC CTTAGC GCCCGG TTTTTTTATGCCGGC STY0945 937082 - 936885 - | hypothetical protein STY0946 937621 - 937244 - | integrase remnant STY0947 937934 - 937728 - | hypothetical protein TERM 1242 937779 - 937760 - G 91 -10 -4.61199 | opp_overlap 937760 937758 AGTTTAGATACAAAA GCCCGTAC TTTC GTACGAGC TCTTTCTTGAATATG TERM 1243 937965 - 937946 - R 100 -10 -4.9755 | ACATATAAGCAAAAA GCCCGTAC TTCT GTACAGGC TCTCAACTTAAATAT TERM 1244 938209 - 938186 - R 95 -13.2 -3.69364 | gap 1 ATGCAATAGACATAA TCCCCGC-CCA AAC TGGCGCGGGGA GGCAAATTAGCGCTG STY0948 938893 - 938216 - | hypothetical protein STY0949 939773 - 938913 - | putative pirin-related protein TERM 1245 938940 - 938966 + g 74 -7.3 -4.09455 | opp_overlap 938944 AAAACGGCCGGAGTT GAAATCGCGGA CTGCT TCTGCGATCTC TTGTTTCGTGTTCAT TERM 1246 939581 - 939608 + g 85 -7 -4.8622 | gap 1, opp_overlap 939580 939581, overlap 939580 TCACGGTCTCGAAAC CGCGGTG-TGG ATGCTCC CCAACGCCGCG TTTTTCATTACCCGG acT 939882 - 940793 + | transcriptional activator TERM 1247 940831 - 940847 + T 76 -7.9 -4.36914 | opp_overlap 940831 AATGGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTATCCAGCCGCC TERM 1248 940847 - 940831 - T 100 -10.1 -5.10497 | opp_overlap 940831 AATGGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTATCCAGCCGCC infA 941102 - 940884 - | translation initiation factor IF-1 TERM 1249 941447 - 941400 - R 82 -2.8 -5.46657 | gap 1, overlap 941401 CACCCCAATAAAAAA TGTGCCGAAAACATTCACTTCCG GGG CAAAAAT-AATGTCCGCGGCACC CAAAAACGGGAGGCC aat 942118 - 941414 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1250 941616 - 941605 - G 74 -2.2 -5.05782 | gap 1, opp_overlap 941606, overlap 941606 ATTCAGCGCAAAAAA CCAGC AGT GC-GG TTTTAGAGGCATTCT TERM 1251 941684 - 941663 - G 70 -6.5 -4.08216 | overlap 941665 CGATTCGCCGCAAAA TAGCGCCCC CTGC GAGACGCCA TACATCCCGCCGACC TERM 1252 941990 - 941972 - G 80 -8.8 -4.07568 | overlap 941973 941975 GTCGCCCGGCGAAAA CCACGGGA AAA TCCCGTGC TGGTAGGCCATTAAC TERM 1253 941989 - 941973 - G 76 -12.3 -3.04398 | overlap 941972 941975 TCGCCCGGCGAAAAC CACGGGA AAA TCCCGTG CTGGTAGGCCATTAA cydC 943884 - 942163 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1254 943057 - 943039 - G 86 -9.5 -4.27117 | overlap 943016 CGCGCAGAAGACAAA CAGCGCG ATGAG CGCGCCG GGCTGCATATTGCCG cydD 945651 - 943885 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1255 943940 - 943925 - G 91 -11.8 -4.12599 | opp_overlap 943925, overlap 943915 AATAACGTCGCAAAA GCGCCG TTGG CGGCGC TGAGTTCGGCATAGC TERM 1256 943925 - 943940 + g 71 -11.8 -2.53263 | opp_overlap 943915 943925 AATAACGTCGCAAAA GCGCCG TTGG CGGCGC TGAGTTCGGCATAGC TERM 1257 944496 - 944520 + g 70 -9.9 -3.41051 | AGCTTTTACCGGAAC CGCTGCGTCCT ACC AGGACGGCGCG TTCTCCTGCCGCTAA TERM 1258 944905 - 944890 - G 73 -5.4 -4.63184 | overlap 944877 AAGCGAGGTGAAAAA TTCCAG CACG CCGGAA GATAAAAAGGCGAGG TERM 1259 944924 - 944914 - G 74 -2.4 -5.0916 | GCCGGAAGATAAAAA GGCG AGG CGCA GTACTTCCATCGTGC TERM 1260 945065 - 945041 - G 75 -5.8 -4.65078 | gap 2 AGACGGTCAAGAAAA TGGCCGCTTAGC CGG GC-AAGC-GCCA GGAAATTGCGGCGGT TERM 1261 945718 - 945734 + r 100 -12.3 -5.52347 | opp_overlap 945718 CGACGCAAAAATAAA GGCGACT TAT AGTCGCC TTTTTTACTTTTGTT TERM 1262 945734 - 945718 - R 100 -12.3 -4.89063 | opp_overlap 945718 CGACGCAAAAATAAA GGCGACT TAT AGTCGCC TTTTTTACTTTTGTT trxB 946733 - 945765 - | thioredoxin reductase lrp 947280 - 947774 + | leucine-responsive transcriptional regulator TERM 1263 947828 - 947864 + F 95 -11.6 -4.13767 | gap 1, opp_overlap 947830 947834, overlap 947831 947834 TCCTGTTAATCCATA CAG-CAACAGTGCCGGG GCAA CCCGGTGCTGTTGTCCG TTTTAGCATCGGGCG TERM 1264 947831 - 947860 + F 95 -16.5 -2.75577 | opp_overlap 947830 947834, overlap 947828 947834 TGTTAATCCATACAG CAACAGTGCCGGG GCAA CCCGGTGCTGTTG TCCGTTTTAGCATCG TERM 1265 947834 - 947857 + F 88 -12.4 -3.52113 | opp_overlap 947834 947830, overlap 947831 947828 TAATCCATACAGCAA CAGTGCCGGG GCAA CCCGGTGCTG TTGTCCGTTTTAGCA TERM 1266 949382 - 949367 - g 77 -8.2 -4.19624 | GAGGTGGAAGAGAAA CGCGCC CGTG AGCGCG AACAACTGGCGGCAT TERM 1267 949537 - 949564 + G 90 -12.6 -3.84825 | opp_overlap 949524, overlap 949538 GAGTGGCGCCCTGGC AGCAGGCGCCGC GGCC GCTGCGCCTGCA TTTAGTCTGGCTACC TERM 1268 949538 - 949563 + G 87 -16.1 -2.90573 | opp_overlap 949524, overlap 949537 AGTGGCGCCCTGGCA GCAGGCGCCGC GGCC GCTGCGCCTGC ATTTAGTCTGGCTAC TERM 1269 949733 - 949718 - g 86 -6.8 -5.06816 | gap 1, overlap 949719 949720 ATTGCTGAAGAAAAA GC-CCGC GAG GCGGAGC GCAATCAGTACGAGA ftsK 947909 - 951940 + | DNA translocase FtsK TERM 1270 951981 - 951950 - f 75 -9.5 -3.64682 | gap 1 GAGTAAACCTGTAAA CCGGATGGC-GC TGTTCAGAG GCTGCCATCCGG CAACAAAATTCAGTA TERM 1271 952237 - 952217 - g 73 -5.3 -4.66163 | overlap 952219 ACCTTTACTCAAAAA GTCACCGAT GGC AGCGGTGCC GCGGTGCAGGAGGGA lolA 952082 - 952696 + | outer-membrane lipoprotein carrier protein TERM 1272 952815 - 952791 - g 71 -11.4 -2.87647 | ATTTAGCACAGTATA TCGGCCAGCA GCATT TGCTGGCCGC AGGTAAGCCGTTGCC TERM 1273 953431 - 953445 + G 74 -7 -4.25104 | overlap 953434 GACCGAGATCGCCGG CGAGCG CAG CGCGCG TTTTGATAACAAAGG ycaJ 952706 - 954049 + | recombination factor protein RarA TERM 1274 954218 - 954234 + F 71 -9.5 -3.18582 | AAAACGTCGCTATTA CGTAAAC GGG GTTTACG TTCATCAATACAATC TERM 1275 955090 - 955101 + G 71 -7.2 -4.03167 | opp_overlap 955089 GCCGATTAAAATGAC GGCG CATA CGCC TTGTTTCCGTTCTGA TERM 1276 955462 - 955450 - g 77 -4.8 -4.8543 | CAAGTCCGACAAAAA GACC CGTCT GGTC CATACCCTGAATGGT serS 954308 - 955600 + | seryl-tRNA synthetase TERM 1277 955626 - 955639 + F 100 -9.5 -5.61596 | opp_overlap 955626 CTCCTCTTCTAAAAA GCGCC TGCG GGCGC TTTTTTTATGCCAGT TERM 1278 955639 - 955626 - f 93 -9.5 -4.56597 | opp_overlap 955626 CTCCTCTTCTAAAAA GCGCC TGCG GGCGC TTTTTTTATGCCAGT TERM 1279 956583 - 956570 - g 71 -9.5 -3.54638 | ATAACCCTGGCGAAA CCCGC ATGA GCGGG GGCGGTGGAACGTAT dmsA 955837 - 958281 + | anaerobic dimethyl sulfoxide reductase chain A precursor dmsB 958292 - 958909 + | anaerobic dimethyl sulfoxide reductase chain B TERM 1280 959177 - 959189 + G 76 -3.3 -5.0538 | opp_overlap 959174 GAGCAATGAAATTGC CAGCG GCT CGGTG TTTTTTGCGGTCGGC dmsC 958911 - 959774 + | anaerobic dimethyl sulfoxide reductase chain C TERM 1281 959829 - 959775 - f 78 -12.1 -3.07816 | opp_overlap 959783 959784 GCGGTAGCCAGCTAA CGCGTTGACGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATACGCCTTTAGCCG CCGTCAATCTAAGGA TERM 1282 959783 - 959821 + F 100 -17.5 -3.53811 | opp_overlap 959775, overlap 959784 CAGCTAACGCGTTGA CGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATACGCC TTTAGCCGCCGTCAA TERM 1283 959784 - 959820 + F 100 -21 -2.72144 | opp_overlap 959775, overlap 959783 AGCTAACGCGTTGAC GCGCATTCGGCCTGCA GAACG TGCAGGCCGAATACGC CTTTAGCCGCCGTCA STY0965 959804 - 959911 + | hypothetical protein ycaD 960124 - 961272 + | MFS family transporter TERM 1284 961285 - 961314 + F 78 -5.7 -4.77047 | overlap 961287 TAACTGTTCTCTGAA TCGTATGCAGGAC GTGA GTCTTGCATACTC TTTGTTTATGTTTTA TERM 1285 961287 - 961312 + F 95 -12.7 -3.95749 | overlap 961285 ACTGTTCTCTGAATC GTATGCAGGAC GTGA GTCTTGCATAC TCTTTGTTTATGTTT TERM 1286 961537 - 961511 - g 70 -3 -4.73388 | gap 1, opp_overlap 961525 961528, overlap 961528 AATGTGCAGGAAAAA CAGTTGCGATG GTACAA CATCGCC-CTG ATGTCGTTTATTACC TERM 1287 961971 - 961991 + G 72 -4 -4.71223 | overlap 961962 GGTCTGTGGCTGGGA TTGCCATG TTTAT CATGTCAA TTTTATATGTTGTGA TERM 1288 962401 - 962413 + G 70 -3.3 -4.70583 | TACTCTGGGGCAAAT CGCCG CGC TGGTG TTTTCTATTGATGCG ycaM 961490 - 962911 + | transport protein TERM 1289 962928 - 962950 + T 73 -7.7 -4.19238 | gap 1 GACGCTCTTTTCCAC GGCGCTC-CT GTCA GGCGAGCGCC TTTTAAGGTTACAGG TERM 1290 963154 - 963175 + T 86 -11.6 -3.53444 | opp_overlap 963154 ACCCAGACAGCAAAA CGGCTACC GTCATG GGTAGCCG TTTAAAAGCGGATAA TERM 1291 963175 - 963154 - T 100 -11.6 -4.39568 | opp_overlap 963154 ACCCAGACAGCAAAA CGGCTACC GTCATG GGTAGCCG TTTAAAAGCGGATAA pflA 964000 - 963203 - | pyruvate formate lyase-activating enzyme 1 STY0970 964431 - 964234 - | hypothetical protein TERM 1292 965575 - 965535 - R 74 -3.4 -4.9725 | gap 1, opp_overlap 965546 965573, overlap 965546 ATGCTTATATAAAAA GTCATTAAAAAGGCCCCAC TGAT ATGGAGCCTTTTTTGT-AC GCTTTTTATGGCGTA TERM 1293 965546 - 965565 + r 84 -4.9 -5.28826 | opp_overlap 965546 965535 AAAAGTCATTAAAAA GGCCCCA CTGATA TGGAGCC TTTTTTGTACGCTTT TERM 1294 965565 - 965546 - R 84 -7.8 -4.79667 | opp_overlap 965546, overlap 965535 AAAAGTCATTAAAAA GGCCCCAC TGAT ATGGAGCC TTTTTTGTACGCTTT pflB 967889 - 965607 - | formate acetyltransferase 1 TERM 1295 966026 - 966040 + g 71 -4.2 -4.65916 | CAGCGCGACGACCAT CCGG GGTGTTA CCGG TTTTCTTACCATACA focA 968806 - 967949 - | formate transporter TERM 1296 969159 - 969139 - R 100 -10.4 -5.26247 | gap 1, opp_overlap 969139 TGAAAATAAATAAAA CGGGGCCGC AAAG GCG-CCCCG TAATATAACGCAGCC TERM 1297 969139 - 969159 + r 71 -10.4 -2.62184 | gap 1, opp_overlap 969139 TGAAAATAAATAAAA CGGGGCCGC AAAG GCG-CCCCG TAATATAACGCAGCC STY0975 970980 - 969211 - | hypothetical protein TERM 1298 969357 - 969326 - G 91 -7.9 -4.85599 | gap 1, opp_overlap 969326 GGTAGTCCATAAAAA GCCG-CTTCACCGC TAAGC GCGGTGCTGGCGGC TTCTACAGCCTCTGC TERM 1299 970760 - 970773 + g 81 -3.7 -5.14563 | overlap 970753 970767 TATTCGCCCAGCGCC GAGGC CAGC GCCGC TTTTTTGGTCGCGCC STY0976 971108 - 971800 + | hypothetical protein serC 971986 - 973074 + | phosphoserine aminotransferase TERM 1300 973092 - 973112 + F 100 -10.4 -5.48623 | CGTTTCTTTTTTCAT CCCCACGG CCAGT CTGTGGGG TTTTTATTTCTGTTT TERM 1301 973592 - 973611 + G 74 -7 -4.36914 | opp_overlap 973588 CAGGAAAACTATCCG CCCCTGCG TCTG CGCGGCGG TTTTATCGGCGGCGA aroA 973145 - 974428 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1302 974523 - 974538 + F 81 -3.3 -5.33785 | opp_overlap 974523 TTGTTGGTGATTTAA CACAT TGATTT ATGTG TTTTTTATAATAGTT TERM 1303 974670 - 974636 - g 72 -3.7 -4.68593 | GGCAGGATGTAAAAA TGGCGTGAA-TGGCAAT TTA ATCGCCAGTTC-CGGCA TGTCAGCCTACAAAG STY0979 974571 - 975332 + | putative lipoprotein cmk 975505 - 976188 + | cytidylate kinase TERM 1304 976476 - 976466 - g 87 -8.2 -4.63527 | overlap 976468 TGAGCAGTTCAAAAA CGCC CAG GGCG AACTGGAAATCCAGG rpsA 976302 - 977975 + | 30S ribosomal protein S1 TERM 1305 978084 - 978054 - f 85 -12.7 -3.33696 | gap 1, opp_overlap 978061, overlap 978057 978061 TCGGCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATCTCACGGCTGCA TERM 1306 978082 - 978057 - f 93 -15.5 -2.84098 | opp_overlap 978061, overlap 978054 978061 GCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATCTCACGGCTG TERM 1307 978061 - 978078 + F 86 -14.1 -3.20382 | opp_overlap 978057 978054 978061 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATCTCACG TERM 1308 978078 - 978061 - f 90 -14.1 -3.30554 | opp_overlap 978061, overlap 978057 978054 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATCTCACG ihfB 978131 - 978415 + | integration host factor subunit beta TERM 1309 978438 - 978468 + F 87 -11.3 -3.86897 | opp_overlap 978446, overlap 978439 978446 CGCAAAACTTGAACC CGAAAAAAGCACC GTCAG GGTGCTTTTTTCA TTTATACGCCGTCAG TERM 1310 978439 - 978467 + F 87 -14.8 -2.91924 | opp_overlap 978446, overlap 978438 978446 GCAAAACTTGAACCC GAAAAAAGCACC GTCAG GGTGCTTTTTTC ATTTATACGCCGTCA TERM 1311 978446 - 978460 + F 90 -7.1 -5.42514 | opp_overlap 978446, overlap 978439 978438 TTGAACCCGAAAAAA GCACC GTCAG GGTGC TTTTTTCATTTATAC TERM 1312 978460 - 978446 - f 87 -7.1 -5.09426 | opp_overlap 978446 978439 978438 TTGAACCCGAAAAAA GCACC GTCAG GGTGC TTTTTTCATTTATAC TERM 1313 979931 - 979949 + G 71 -5.9 -4.28656 | overlap 979933 ATGGTACCTGACCGA TCGCGCG TTAGC CGCGCTA TTTTACCTGTTGAAT TERM 1314 980287 - 980304 + G 74 -7.7 -4.21194 | opp_overlap 980286, overlap 980290 TGCGCTGGCATAATC TGACGCC GGAG GGCGTTA TTTTGAGTCATGAGC TERM 1315 980290 - 980301 + G 77 -7.2 -4.22883 | opp_overlap 980286, overlap 980287 GCTGGCATAATCTGA CGCC GGAG GGCG TTATTTTGAGTCATG ycaI 978645 - 980909 + | hypothetical protein msbA 980946 - 982694 + | lipid transporter ATP-binding/permease protein TERM 1316 982913 - 982903 - g 70 -6.8 -4.07568 | TTGGCTGGTGGAAAA GCTG CAA CAGC GTGGCGTGCGCGTGG TERM 1317 983293 - 983256 - g 95 -12.7 -4.08216 | gap 1, opp_overlap 983258 CCAGTCGCCTGAAAA CCGTG-GACGCCGCTATC GTG AATGGCGGCGTCGCCCGG GCGGGCGAAATCCCC lpxK 982691 - 983668 + | tetraacyldisaccharide 4'-kinase TERM 1318 984557 - 984545 - f 77 -9.1 -3.90922 | ACCGGCGCTAAATAA CGCCT TAA AGGCG ACCCATAGCGCAGTA STY0989 984996 - 985178 + | hypothetical protein TERM 1319 985535 - 985519 - g 74 -7.9 -4.08216 | overlap 985520 CCAGGTCGCGGAAAA TCTGGCG CAG CGCCAGG TTGGCATGGCGACGC TERM 1320 985534 - 985520 - g 72 -11.4 -3.04715 | overlap 985519 CAGGTCGCGGAAAAT CTGGCG CAG CGCCAG GTTGGCATGGCGACG kdsB 985175 - 985921 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 1321 985963 - 985927 - f 73 -10.9 -2.74371 | opp_overlap 985924, overlap 985924 985961 AATGCGTTAACATGA TCCTGTTCATGATCGTC TTA GACGGTCATGAACAGCG CGGTATGATAGCGCA TERM 1322 986018 - 986031 + F 70 -5.3 -4.45077 | TCAGTGGCGGCTTTC TCGTA CCGT TACGA TTTTCCTCATTTTTC TERM 1323 986217 - 986207 - g 74 -8.2 -4.05446 | opp_overlap 986207 986206 986214, overlap 986208 TGCGTGAATGAGAAA GCGG ATT CCGC ATTGTGGTCATTATA STY0991 986132 - 987025 + | hypothetical protein ycbC 987781 - 987005 - | hypothetical protein TERM 1324 987340 - 987318 - G 70 -9.8 -3.40611 | overlap 987316 TCCAGCGTAATAATA TCGCTACGCG GTA CGCCCAGCGA CTGCGCCACCCGCGC TERM 1325 987443 - 987409 - G 71 -4.9 -4.56597 | gap 1 CGCCGCCGGTAAAAA TCAGCC-TGGCTCCCG GATT CGCGCGCCACAGCCGA ATGCCTTCCGCCAGC smtA 987917 - 988720 + | putative metallothionein SmtA TERM 1326 989591 - 989562 - g 73 -8.7 -3.87815 | CGTCACGTGCATAAA TTTATCCGTACCG CGAT CGATATGGATAAA AACCGTATCTTCGCC TERM 1327 989881 - 989908 + G 77 -11.3 -3.49568 | gap 1, opp_overlap 989879, overlap 989851 989879 ATCTGGCGCAATACC CGCGCGCGCGTC ATTTC GACGTG-GCGCG TATTGTTATCGATCA mukF 988713 - 990035 + | condesin subunit F mukE 990043 - 990720 + | condesin subunit E TERM 1328 991365 - 991375 + G 70 -6.8 -4.20367 | AGCGCCATTACCCGA TCGC TAC GCGA TTATTTATTGCCGGA TERM 1329 992136 - 992113 - g 93 -4.4 -5.4505 | overlap 992116 CGTTGGAACAAAAAA TGAGCGTGGC GCAA ACCGCGCACA GCCAGTTTGAGCAGG TERM 1330 993586 - 993565 - g 70 -8.7 -3.72893 | gap 1, opp_overlap 993564, overlap 993569 CATGGTCGCAGCAAA TGC-AGCGCG ACG CGCGCCAGCA GGCTTTTGCTCTGGC TERM 1331 993705 - 993683 - g 79 -7.6 -4.42238 | overlap 993684 CGATCTCAACGAAAA GCTGCGCCAG CGG CTGGAGCAGG CGGAAGCCGAGCGTA TERM 1332 993704 - 993684 - g 74 -11.1 -3.2486 | overlap 993683 GATCTCAACGAAAAG CTGCGCCAG CGG CTGGAGCAG GCGGAAGCCGAGCGT TERM 1333 993738 - 993758 + G 81 -12.5 -3.07816 | CGCGCCCGCGAAGCG CTGCGCAGC CAT GCCGCGCAG TTAAGTCAGTACAGC mukB 990720 - 995186 + | cell division protein MukB TERM 1334 995224 - 995246 + F 71 -10.6 -2.59431 | opp_overlap 995207 995206 995236, overlap 995221 995240 CCTGATGGCGCCTCG CTTATCAGGC AAG GCCGGATAAG TCGGTTATGCCGGCA TERM 1335 995248 - 995275 + F 76 -9.2 -3.66589 | gap 1, opp_overlap 995236 995247 995246, overlap 995221 995248 995240 CAAGGCCGGATAAGT C-GGTTATGCCGG CAT CCGGCATAACAAG TTCTGCTTTATCATT TERM 1336 995298 - 995313 + F 100 -11.8 -5.42975 | TTATCATTAGCCTGG GGCGGC GAAA GCCGCC TTTTTCTTTATCTGA ycbB 995531 - 997378 + | hypothetical protein STY0998 997638 - 998186 + | hypothetical protein ycbL 998214 - 998861 + | hypothetical protein TERM 1337 998898 - 998868 - T 93 -14.2 -3.50853 | opp_overlap 998875, overlap 998875 GTCTGGTAAGCAGAA TGAAAAAGCCTGCA ATG TGCAGGCTTTTTTA TCGGTCACGCCAGTC TERM 1338 998875 - 998891 + T 100 -12.3 -5.28176 | opp_overlap 998875 998868 AAGCAGAATGAAAAA GCCTGCA ATG TGCAGGC TTTTTTATCGGTCAC TERM 1339 998891 - 998875 - T 100 -12.3 -4.95876 | opp_overlap 998875, overlap 998868 AAGCAGAATGAAAAA GCCTGCA ATG TGCAGGC TTTTTTATCGGTCAC aspC 1000113 - 998923 - | aromatic amino acid aminotransferase TERM 1340 999630 - 999591 - G 70 -9.2 -3.66556 | gap 1, opp_overlap 999598 AACCGTGGAACAGAA CCACATCGCCGGCCTGTGC TTC GCTCAGGCTGGCT-TGTAG CGCTTCAAAATCCAG TERM 1341 999598 - 999624 + g 100 -15.8 -3.33261 | opp_overlap 999591 GAACAGAACCACATC GCCGGCCTGTGC TTC GCTCAGGCTGGC TTGTAGCGCTTCAAA TERM 1342 999698 - 999710 + g 71 -4.8 -4.5442 | ACTTCCAGGCCGGCA GCGT TAAAC ACGC TTTTGTGGTTCGGCC TERM 1343 999798 - 999815 + g 71 -9.8 -3.55761 | overlap 999799 999801 CGGCAATGCGTAACG CGCCGG TACCGC CCGGCG TTTGCGCCGTGCGTG TERM 1344 1000265 - 1000250 - R 100 -9 -5.77988 | opp_overlap 1000250 AGAGAGATAAAAAAA CAGGAC CGAA GTCCTG TTTTTGAGGCATAAA TERM 1345 1000250 - 1000265 + r 89 -9 -4.58395 | opp_overlap 1000250 AGAGAGATAAAAAAA CAGGAC CGAA GTCCTG TTTTTGAGGCATAAA ompF 1001389 - 1000298 - | outer membrane protein F precursor TERM 1346 1001833 - 1001843 + r 72 -2.6 -5.04597 | opp_overlap 1001818 1001817 1001833, overlap 1001818 TAATCCGCAATAAAA TTAA GGA TTAA TTTTTATGTGTAAAT TERM 1347 1001948 - 1001938 - R 78 -5.4 -4.79352 | TTATTGATAATAAAA CTGA CAT TCAG GCGAAAAAAAAGGCC TERM 1348 1001960 - 1001976 + r 86 -13.7 -3.12999 | opp_overlap 1001960 TCAGGCGAAAAAAAA GGCCAGC ATA GCTGGCC TTGAGTGTGACGTAA TERM 1349 1001976 - 1001960 - R 100 -13.7 -5.78622 | opp_overlap 1001960 TCAGGCGAAAAAAAA GGCCAGC ATA GCTGGCC TTGAGTGTGACGTAA asnC 1003395 - 1001995 - | asparaginyl-tRNA synthetase TERM 1350 1002505 - 1002491 - G 75 -7.1 -4.52589 | TCGGTGGAGACAAAA CGCTC CAGAC GAGCG ATAGCGTCTTTATCC TERM 1351 1002990 - 1002946 - G 70 -9.3 -3.67597 | CTGCTCATCGAAGAA GCGAT-GCAGCGCCTGCGCCA GAGTA TGGCGGACGCGC-GCTACCGC GCCAATCAGGTTGGT TERM 1352 1003556 - 1003537 - R 74 -5.7 -4.6526 | AGAAACCTGTAAAAA GTTCGCA CCTGCT CGCGAAC AATTGAGAATTTAGG STY1005 1004057 - 1003596 - | putative transcriptional regulator TERM 1353 1005311 - 1005322 + H 73 -4.4 -4.88918 | GCCTATTATTCGGGA CAAC ACCA GTTG TTTTATTTCCGCTGA TERM 1354 1005652 - 1005636 - H 75 -2.9 -5.1101 | overlap 1005624 1005637 GCAGCATGTAAAAAA CGCGTTT TTT ATACGCA TAATAAACCTAATGC TERM 1355 1005872 - 1005883 + G 75 -5.8 -4.61353 | CTCTTTGAATTTCTA TGGG GTGG CCCA TTATTTTTGTGTGTC STY1009 1005836 - 1007269 + | putative ion:amino acid symporter TERM 1356 1007338 - 1007312 - T 85 -12.3 -3.41745 | overlap 1007316 TGGTCAGAAGAGTAA CAAAGCGCCCA CTTTC CGGGCGCTTCG CACAGGCATGGTTAA TERM 1357 1007334 - 1007316 - T 87 -9.5 -4.34759 | overlap 1007312 CAGAAGAGTAACAAA GCGCCCA CTTTC CGGGCGC TTCGCACAGGCATGG pncB 1008552 - 1007350 - | nicotinate phosphoribosyltransferase int 1010087 - 1008747 - | integrase TERM 1358 1009903 - 1009920 + g 82 -5.5 -5.07567 | opp_overlap 1009894 1009889 ACCGAAGAACGCAGT TCGCCAG CTAT CTTGCGA TTTTTTGCAGTGTCA TERM 1359 1009929 - 1009961 + g 73 -9.1 -3.89215 | overlap 1009930 CTTGCGATTTTTTGC AGTGTCAGGGATACC AAG GTTTTCCCTGACACG TTTACCTTTATACAG TERM 1360 1009930 - 1009960 + g 79 -12.6 -2.93047 | overlap 1009929 TTGCGATTTTTTGCA GTGTCAGGGATACC AAG GTTTTCCCTGACAC GTTTACCTTTATACA xis 1010332 - 1010084 - | excisionase STY1013 1010618 - 1010373 - | putative bacteriophage protein STY1014 1011499 - 1010618 - | putative DNA methylase STY1015 1012560 - 1011496 - | putative bacteriophage protein TERM 1361 1012590 - 1012619 + r 72 -8.5 -3.82218 | gap 1, opp_overlap 1012593, overlap 1012594 ACATTTAATTCTTCA ACATGGGATGGCGC ATC GCGCCAACCC-TGA TTTCGTCCTGTGCGT TERM 1362 1012617 - 1012593 - R 75 -11.3 -3.04322 | opp_overlap 1012590 1012594 TTTAATTCTTCAACA TGGGATGGCGC ATC GCGCCAACCCT GATTTCGTCCTGTGC TERM 1363 1012594 - 1012616 + r 88 -14.8 -2.99207 | opp_overlap 1012593, overlap 1012590 TTAATTCTTCAACAT GGGATGGCGC ATC GCGCCAACCC TGATTTCGTCCTGTG exo 1013318 - 1012638 - | exonuclease betA 1014100 - 1013315 - | bacteriophage recombination protein gam 1014402 - 1014106 - | host-nuclease inhibitor protein kil 1014693 - 1014493 - | FtsZ inhibitor protein TERM 1364 1014961 - 1014946 - R 100 -7.5 -5.75478 | opp_overlap 1014946 AATGACATAAAAAAA CCGCC AGTTAA GGCGG TTAGTAGTTTTAAAG STY1020 1015386 - 1014982 - | putative DNA-binding protein TERM 1365 1015636 - 1015624 - H 71 -3.4 -4.85782 | opp_overlap 1015624 TGGTTTAAAAACAAA GTTC CCGGC GAAC TTGTAGTTCGAGTGG STY1021 1015718 - 1016092 + | putative DNA-binding protein TERM 1366 1016150 - 1016112 - f 72 -3.1 -4.91873 | gap 1, opp_overlap 1016119, overlap 1016114 1016119 GACAGCAACCAAAAA GGCGAAAGCCGC-GGTGA GGGG TCACCAACGGCTTTCTGG TGCAAAAACGGTAGG TERM 1367 1016143 - 1016119 - f 72 -8.6 -3.81062 | gap 1, opp_overlap 1016119, overlap 1016114 1016112 ACCAAAAAGGCGAAA GCCGC-GGTGA GGGG TCACCAACGGC TTTCTGGTGCAAAAA TERM 1368 1016677 - 1016702 + G 77 -8.3 -4.11484 | opp_overlap 1016670 1016694, overlap 1016658 1016678 CCCGAAAACGGGGAT AGTTATCCCTG AAAA CAGGGATAGCG TTTTACCCCATTCAG TERM 1369 1016678 - 1016701 + G 76 -11.8 -3.06569 | opp_overlap 1016670 1016694, overlap 1016677 CCGAAAACGGGGATA GTTATCCCTG AAAA CAGGGATAGC GTTTTACCCCATTCA TERM 1370 1016748 - 1016731 - g 88 -11.3 -4.09864 | opp_overlap 1016721 1016718 AGCCATCCCTGAAAA CGGGGAT AGTT ATCCCCG AAAAGAGGGAAGGGC STY1022 1016177 - 1017160 + | hypothetical protein STY1023 1017163 - 1017912 + | putative replication protein STY1024 1017923 - 1018270 + | putative DNA-binding protein STY1025 1018267 - 1018791 + | hypothetical protein STY1026 1018791 - 1019264 + | putative methyltransferase STY1027 1019268 - 1019840 + | hypothetical protein TERM 1371 1019851 - 1019870 + F 71 -10 -3.14931 | opp_overlap 1019846 1019843 CGTGAAACACCTATA TGCCGGTC CTGT GATCGGCA TTAGTGCAAAATCAA TERM 1372 1019908 - 1019890 - f 86 -4.6 -5.46698 | TGCAAAATCAAAAAA TACGAATC AGT GATTTGTA ATCAACATTTCTTAG STY1028 1019934 - 1020200 + | putative bacteriophage protein TERM 1373 1020229 - 1020216 - f 71 -9.5 -3.28791 | AGTGTTGCGTCATAA CCCGC TGCG GCGGG TTAGCCCAACAAGCC TERM 1374 1020238 - 1020263 + F 75 -11.1 -3.01712 | opp_overlap 1020242, overlap 1020242 CGGCGGGTTAGCCCA ACAAGCCTCGC ATAT GCGGGGCTTGA TGTTGAAGCAGGGCG TERM 1375 1020242 - 1020259 + F 77 -10.5 -3.36273 | opp_overlap 1020242, overlap 1020238 GGGTTAGCCCAACAA GCCTCGC ATAT GCGGGGC TTGATGTTGAAGCAG STY1029 1020282 - 1020443 + | putative bacteriophage protein TERM 1376 1020729 - 1020706 - g 79 -3 -5.1675 | TCACGCATTAAAAAA GGCAGATCGC TTGT ACATTCCGCC TCGTGACAAATCCAT STY1030 1020578 - 1020865 + | putative bacteriophage protein TERM 1377 1021041 - 1021074 + G 95 -14 -3.50853 | opp_overlap 1021040 1021048 1021050, overlap 1021043 ACCATTCGATATTAT GAGCAGACAGACGA TATGTT TCGTCTGTCTGCTG TTCTAATTGAAAGCC TERM 1378 1021043 - 1021072 + G 100 -16.6 -3.32946 | opp_overlap 1021040 1021048 1021050, overlap 1021041 CATTCGATATTATGA GCAGACAGACGA TATGTT TCGTCTGTCTGC TGTTCTAATTGAAAG STY1031 1020876 - 1021373 + | putative bacteriophage protein TERM 1379 1021387 - 1021374 - f 80 -9.5 -3.84278 | opp_overlap 1021374, overlap 1021362 AAATCGAATGAATAA CCCGC TACG GCGGG TTTTTTTTCGCTTTC TERM 1380 1021374 - 1021387 + F 100 -9.5 -5.89947 | opp_overlap 1021374 1021362 AAATCGAATGAATAA CCCGC TACG GCGGG TTTTTTTTCGCTTTC STY1032 1021558 - 1021797 + | putative damage-inducible protein TERM 1381 1021842 - 1021832 - g 73 -5.4 -4.55295 | opp_overlap 1021837 GTTTCCAGAAATAAA GTCA GTG TGAC GGGGGGTTACATGTT TERM 1382 1021954 - 1021980 + G 81 -6.6 -4.68103 | TAGCGGACGCGCCCT GATGTATCGTCG TGG TGACGAGATATC TTTTGTTCCCCTTCA STY1033 1021787 - 1022092 + | putative bacteriophage protein STY1034 1022132 - 1022734 + | putative bacteriophage protein TERM 1383 1023147 - 1023132 - g 78 -6 -4.72201 | overlap 1023133 GCTGAGAAAAAAGAA CGCGCC GCCT GGCGCC AGCGGAAAGCCGCGG TERM 1384 1023146 - 1023133 - g 70 -9.5 -3.42236 | overlap 1023132 CTGAGAAAAAAGAAC GCGCC GCCT GGCGC CAGCGGAAAGCCGCG STY1035 1022943 - 1023554 + | hypothetical protein TERM 1385 1023550 - 1023539 - f 70 -2.2 -5.00616 | gap 1 GCGTGCGCTAAAAAA GCTGG AGG CC-GC ATGAAACCAGAACTG STY1036 1023687 - 1024484 + | putative prophage antitermination protein TERM 1386 1024579 - 1024594 + F 100 -8.2 -5.19275 | opp_overlap 1024579 TACAAGAATTAAGAA CCTCGC CTCG GCGGGG TTTTCTTTTATGGAT TERM 1387 1024756 - 1024775 + F 93 -9.2 -4.84918 | opp_overlap 1024756 CCGGCAACAATTTAA GCCTCGGT GATT GCCGGGGC TTTTCTGTTTGTGCC STY1038 1024883 - 1025008 + | putative bacteriophage protein STY1039 1025593 - 1025144 - | putative lipoprotein TERM 1388 1025729 - 1025761 + H 100 -22.3 -3.94634 | opp_overlap 1025729 1025733, overlap 1025733 TGTGTTCTTTATGAA TAAATATCCTCCGGC TAT GCCGGAGGATATTTA TTATTTCCCCTCATA TERM 1389 1025761 - 1025729 - H 100 -22.3 -3.14132 | opp_overlap 1025729 1025733, overlap 1025733 TGTGTTCTTTATGAA TAAATATCCTCCGGC TAT GCCGGAGGATATTTA TTATTTCCCCTCATA TERM 1390 1025733 - 1025757 + H 100 -18.7 -4.57581 | opp_overlap 1025733 1025729, overlap 1025729 TTCTTTATGAATAAA TATCCTCCGGC TAT GCCGGAGGATA TTTATTATTTCCCCT TERM 1391 1025757 - 1025733 - H 100 -18.7 -4.24342 | opp_overlap 1025729 1025733, overlap 1025729 TTCTTTATGAATAAA TATCCTCCGGC TAT GCCGGAGGATA TTTATTATTTCCCCT TERM 1392 1025917 - 1025929 + G 70 -5.5 -4.52589 | GGTATTCGGCGCTTT TGCCG GCT CGGTA TTTTATGTCGCCACG TERM 1393 1026137 - 1026153 + G 70 -9.5 -3.39058 | overlap 1026136 CTCAACAGTCAGGAT CTGAACA CTC TGTTCAG TATTCTCTCTCGTAT STY1040 1025810 - 1026199 + | putative prophage membrane protein STY1041 1026186 - 1026467 + | putative prophage membrane protein TERM 1394 1026939 - 1026949 + G 85 -4.6 -5.28176 | overlap 1026926 GTCATGCCGCCCGAT CCGC AGC GTGG TTTTTTGTGACTAAA STY1042 1026467 - 1027081 + | putative bacteriophage protein STY1043 1027078 - 1027617 + | putative secreted protein TERM 1395 1027606 - 1027623 + F 100 -10.5 -5.18726 | ACCAACAATCCCATA GCTCCGC ACTA GCGGGGC TTTTTGTTGTAACAA TERM 1396 1027978 - 1027990 + G 70 -9.1 -3.68529 | TACCAGTTCATCTAT CCTGG CGA CCAGG TTTACGTGATGAACT STY1044 1027660 - 1028037 + | hypothetical protein TERM 1397 1028200 - 1028181 - g 76 -2.8 -5.06414 | gap 1, opp_overlap 1028183 1028184, overlap 1028184 CTCTTTGAATAAAAA CGA-GCCAG GCG CTGGCGTTG GTTCTTCAGTTACAG STY1045 1028101 - 1028361 + | putative bacteriophage protein TERM 1398 1028369 - 1028382 + F 100 -9.5 -5.08601 | opp_overlap 1028369 1028368 GTAATTGATAACAAG CCGCC TCCG GGCGG TTTTTATTGCCATCA TERM 1399 1028391 - 1028430 + F 88 -12.2 -3.57144 | opp_overlap 1028402 1028403, overlap 1028403 CGGGCGGTTTTTATT GCCATCACAAATGCCACC TTCG GGTGGCTTTTTTAATGGC TTTAACCATAGGACA TERM 1400 1028403 - 1028418 + F 100 -10.4 -5.19261 | opp_overlap 1028403 1028402, overlap 1028391 ATTGCCATCACAAAT GCCACC TTCG GGTGGC TTTTTTAATGGCTTT TERM 1401 1028418 - 1028403 - f 73 -10.4 -2.97653 | opp_overlap 1028391 1028403, overlap 1028402 ATTGCCATCACAAAT GCCACC TTCG GGTGGC TTTTTTAATGGCTTT TERM 1402 1028497 - 1028460 - gf 76 -7.5 -4.20042 | opp_overlap 1028459 1028487 AGCAACATGGCAAAA CCGGACTGGGAGGCCAT CGAG ACGGCATACCGGGCCGG AATTATGAGCCTTCG TERM 1403 1028640 - 1028612 - gf 78 -6.1 -4.67353 | overlap 1028627 GCAGGTACGCAAAAA TGGTACGCA AAAAAACACGG TGCGTACCA CGAGGAGGCCTGCCA TERM 1404 1028642 - 1028627 - gf 89 -3.2 -5.47218 | overlap 1028612 TGGTACGCAAAAAAA CACGGT GCGT ACCACG AGGAGGCCTGCCAGC STY1046 1028451 - 1029203 + | putative prophage terminase small subunit TERM 1405 1029459 - 1029471 + GF 77 -3.3 -5.13354 | opp_overlap 1029450 1029453, overlap 1029453 AATCATTAACCGGGT TACCG GCT CGGAA TTTGTTTTTTATGGG STY1047 1029169 - 1030572 + | putative prophage terminase large subunit TERM 1406 1031406 - 1031375 - gf 71 -4.4 -4.56597 | GGCGTTGCTGAAAAA CATTGATCTGATCC GCCA GTTTCAGAGCAATG AAGGCATGACGCTAA STY1048 1030572 - 1032038 + | putative bacteriophage protein STY1049 1031929 - 1032663 + | putative bacteriophage protein STY1050 1032678 - 1033898 + | putative bacteriophage protein STY1051 1033902 - 1034408 + | putative bacteriophage protein STY1052 1034420 - 1035361 + | putative bacteriophage protein TERM 1407 1035387 - 1035372 - g 72 -11.8 -2.73474 | overlap 1035371 TCTGATAACCAGAAT GGCCCC GAAA GGGGCC TGAAGGAAACTGAAA TERM 1408 1035428 - 1035416 - g 74 -3.3 -4.88405 | AATGGCGAAAGAAAA GCTGG TTA CCATC CATGTTCACACCCCG STY1053 1035345 - 1035770 + | putative bacteriophage protein STY1054 1035886 - 1036143 + | putative bacteriophage protein TERM 1409 1036413 - 1036371 - g 100 -19.8 -3.3506 | opp_overlap 1036371, overlap 1036395 GTTAAATCGGCAGAA GAGCAGACGGTGCCGCAGCT CAA AGCCGCGGCGCAGGCTGCTC TTGATGGTAATGCTG TERM 1410 1036371 - 1036413 + G 100 -19.8 -3.23692 | opp_overlap 1036371 1036395 GTTAAATCGGCAGAA GAGCAGACGGTGCCGCAGCT CAA AGCCGCGGCGCAGGCTGCTC TTGATGGTAATGCTG STY1055 1036140 - 1036694 + | putative bacteriophage protein STY1056 1036681 - 1037070 + | putative bacteriophage protein STY1057 1037045 - 1037608 + | putative bacteriophage protein STY1058 1037612 - 1038757 + | hypothetical protein STY1059 1038768 - 1039208 + | putative bacteriophage protein TERM 1411 1039325 - 1039342 + G 70 -9.1 -3.68351 | AATGATGTCAGATTT CGGGAGT ATTC GCTCCCG TTTGCCTGCTGACGG STY1060 1039212 - 1039664 + | putative bacteriophage protein STY1061 1039842 - 1041830 + | putative bacteriophage protein TERM 1412 1041890 - 1041873 - g 72 -2 -4.95758 | overlap 1041875 AGCAGAGCAGAAAAA TAGGAA TGATTG TTCCCA GTGTTGTTATTTCAG STY1062 1041830 - 1042417 + | putative bacteriophage protein STY1063 1042417 - 1042719 + | putative bacteriophage protein STY1064 1042722 - 1043789 + | putative bacteriophage protein STY1065 1043789 - 1044142 + | putative secreted protein STY1066 1044292 - 1045023 + | putative bacteriophage protein STY1067 1045023 - 1045451 + | putative bacteriophage protein TERM 1413 1045490 - 1045475 - f 95 -11.8 -3.92659 | opp_overlap 1045475, overlap 1045469 TTCTCAAAATTCAAA CCCGCC ACTT GGCGGG TTTTTTGCTTTCTGG TERM 1414 1045475 - 1045490 + F 100 -11.8 -5.42514 | opp_overlap 1045469 1045475 TTCTCAAAATTCAAA CCCGCC ACTT GGCGGG TTTTTTGCTTTCTGG STY1068 1045516 - 1046268 + | putative bacteriophage protein STY1069 1046268 - 1046621 + | putative bacteriophage protein STY1070 1046621 - 1047820 + | putative bacteriophage protein STY1071 1047817 - 1048497 + | putative bacteriophage protein TERM 1415 1048557 - 1048591 + G 71 -5.7 -4.25104 | gap 2, opp_overlap 1048554, overlap 1048566 1048569 AATGTTACATCACAG CCTGACTGGGAAGCGCT GCC GGCGCT-CCT-GTCTGG TTTTACTGCGGGCAA TERM 1416 1048973 - 1048961 - g 80 -4.7 -5.03747 | overlap 1048962 1048963 AAATCTGGCAAAAAA TGCCG TCC CGGCG ACACGGCGGGTTAAC TERM 1417 1049874 - 1049900 + G 73 -5.2 -4.56597 | gap 1, opp_overlap 1049874, overlap 1049877 AAAGTAGATGAATAT G-GACCAGCAG AAGCGC CTGCTGGTTGC TTTTTAACACAGGCC TERM 1418 1049877 - 1049896 + G 73 -9.3 -3.80855 | opp_overlap 1049874, overlap 1049874 GTAGATGAATATGGA CCAGCAG AAGCGC CTGCTGG TTGCTTTTTAACACA STY1072 1048497 - 1050008 + | hypothetical protein STY1073 1050023 - 1050541 + | hypothetical protein TERM 1419 1050638 - 1050620 - f 73 -7.6 -4.07968 | TAAGATATAAGTAAA TTTTCTTT AGA AAAGAAAA AACTACTGTACTTAT TERM 1420 1050933 - 1050921 - f 73 -7.7 -4.07568 | opp_overlap 1050921 TTCCGTGGTGTAAAA TCTGG CCG CCAGA TACATTAATCCCAGA TERM 1421 1051069 - 1051101 + F 93 -14.2 -3.63627 | opp_overlap 1051068 TGTCACGGTAACGAC TACTGACTGGCTGG CTTAT CCGGCCAGTCAGAA TTTGAGGTATCCACC TERM 1422 1051164 - 1051154 - g 71 -8.2 -3.91716 | overlap 1051155 TGATTGTGGAAAGAA CCCG CGC CGGG CTGGCAGCGGCAAGG STY1075 1051126 - 1051266 + | putative DNA invertase (fragment) STY1076 1052164 - 1051463 - | hypothetical protein STY1077 1052755 - 1052477 - | hypothetical protein pepN 1053181 - 1055793 + | aminopeptidase N TERM 1423 1055821 - 1055849 + F 100 -9.6 -5.41143 | gap 1, opp_overlap 1055819 1055821, overlap 1055823 TAAAGAGGTAAAACA TGCCCGGTAAGCG TTAG CGCT-GCCGGGTA TTTTTTTGCCGGATG TERM 1424 1055823 - 1055847 + F 87 -10 -4.34482 | gap 1, opp_overlap 1055821 1055819, overlap 1055821 AAGAGGTAAAACATG CCCGGTAAGCG TTAG CGCT-GCCGGG TATTTTTTTGCCGGA pyrD 1056001 - 1057011 + | dihydroorotate dehydrogenase 2 TERM 1425 1057030 - 1057059 + F 78 -5.7 -4.84918 | opp_overlap 1057030 TTACCCTTTATCAGA CAACCAGGGCT TTATTTCC GGCACTGGTTG TTTTATATTTCTCCA TERM 1426 1057297 - 1057319 + G 86 -6.8 -4.99035 | CGTAAAATGCTTACG CCGGACGCGT TTT GCCCGACCGG TTTTTGTGTGGATGA STY1080 1057174 - 1057719 + | hypothetical protein STY1081 1058825 - 1057716 - | hypothetical protein STY1082 1058924 - 1061032 + | 23S rRNA m(2)G2445 methyltransferase TERM 1427 1062154 - 1062134 - g 74 -9.7 -3.6608 | overlap 1062120 ACCACGCTACTGAAA CTGATGCTG GGA CAGCTTCAG GCTGACAGCGGGCGC TERM 1428 1062356 - 1062341 - g 81 -11.8 -3.59979 | opp_overlap 1062351 1062352 CTGTTTCACCCCAAA CGGGCG ATGA CGCCCG TCCGCGCGCTTTCCG TERM 1429 1062814 - 1062829 + G 80 -4.6 -5.00616 | overlap 1062802 AGCGCTACAGGCGCA GGTTGC GGAT GCGGCC TTTTTTAGCCAACCC STY1083 1061045 - 1062952 + | ABC transporter ATPase component pqiA 1062967 - 1064220 + | putative inner membrane protein TERM 1430 1065363 - 1065345 - g 80 -8.8 -4.07568 | GCGCTTCGCTTAAAA CCGGTAAC CTG GTGACCGG GGCGCTGTATGTCGA TERM 1431 1065572 - 1065550 - g 71 -10.6 -3.25169 | opp_overlap 1065552 1065569, overlap 1065542 1065564 1065565 TGAACAAGCGACCAA TACGCTGTCT GAA AGCCAGCGTA CTATGCGTCGGTTGC pqiB 1064225 - 1065865 + | paraquat-inducible protein B TERM 1432 1065943 - 1065932 - g 78 -2.2 -5.18371 | GCGGAGAAAATAAAA GCTA TTAT CAGC TCCCGATAGCGCAAA STY1086 1065862 - 1066425 + | putative lipoprotein TERM 1433 1066474 - 1066448 - f 70 -9.4 -3.31183 | opp_overlap 1066448 ATAATGTAAATTTAA CCGCTTCAGG TCGTGCG CCTGAGGCGG TTTTTATTTTTGACG TERM 1434 1066448 - 1066474 + F 100 -12.3 -5.61881 | opp_overlap 1066448 ATAATGTAAATTTAA CCGCTTCAGGT CGTGC GCCTGAGGCGG TTTTTATTTTTGACG TERM 1435 1066614 - 1066636 + F 71 -7.1 -4.16397 | overlap 1066607 1066613 AGGTATTCGTGTAGT GTGATTGCA CATTT TGTAATCAC TGTTTTCTTTTCCAC rmf 1066679 - 1066846 + | ribosome modulation factor (protein E) TERM 1436 1066863 - 1066893 + T 74 -8.2 -3.95219 | opp_overlap 1066866 1066870, overlap 1066870 1066891 TCTGTCTCTTTAGAA AAAGAAACCTCCGC AGT GCGGAGGTTTCGCC TTTATGGGCTTTGCA TERM 1437 1066890 - 1066866 - T 100 -18.7 -4.82901 | opp_overlap 1066863 1066870, overlap 1066870 GTCTCTTTAGAAAAA GAAACCTCCGC AGT GCGGAGGTTTC GCCTTTATGGGCTTT TERM 1438 1066886 - 1066870 - T 100 -13.7 -4.96501 | opp_overlap 1066863 1066870, overlap 1066866 CTTTAGAAAAAGAAA CCTCCGC AGT GCGGAGG TTTCGCCTTTATGGG TERM 1439 1066870 - 1066886 + T 100 -13.7 -3.74347 | opp_overlap 1066870 1066866, overlap 1066863 CTTTAGAAAAAGAAA CCTCCGC AGT GCGGAGG TTTCGCCTTTATGGG fabA 1067464 - 1066946 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase STY1089 1069293 - 1067533 - | hypothetical protein TERM 1440 1069454 - 1069437 - H 72 -2.7 -5.04385 | CAGATGGCTAAAAAA CTGATAT TCTG ATAACAG TTACACGGTAACATT STY1090 1069479 - 1069931 + | hypothetical protein TERM 1441 1069992 - 1069959 - T 83 -14.1 -2.64616 | gap 1, opp_overlap 1069969, overlap 1069961 1069969 TTGCCACCCAGACCA GAGCAAAAAACCCCGC GAA GCGGGGTTTTTTA-TC AGACGGAAACTTAAG TERM 1442 1069991 - 1069961 - T 82 -13.4 -2.8655 | opp_overlap 1069969, overlap 1069959 1069969 GCCACCCAGACCAGA GCAAAAAACCCCGC GAA GCGGGGTTTTTTAT CAGACGGAAACTTAA TERM 1443 1069969 - 1069983 + T 100 -12.8 -5.24129 | opp_overlap 1069969 1069961 1069959 GACCAGAGCAAAAAA CCCCGC GAA GCGGGG TTTTTTATCAGACGG TERM 1444 1069983 - 1069969 - T 100 -12.8 -5.23316 | opp_overlap 1069969, overlap 1069961 1069959 GACCAGAGCAAAAAA CCCCGC GAA GCGGGG TTTTTTATCAGACGG ompA 1071055 - 1070003 - | outer membrane protein A sulA 1071919 - 1071410 - | SOS cell division inhibitor TERM 1445 1072713 - 1072676 - g 71 -10.6 -3.25823 | gap 2, overlap 1072677 GTCGGCGTACATGAA GCGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCGA CTGGGCTCATTCGCT TERM 1446 1072712 - 1072677 - g 81 -14.1 -2.55351 | gap 2, overlap 1072676 TCGGCGTACATGAAG CGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCG ACTGGGCTCATTCGC STY1094 1072136 - 1072741 + | hypothetical protein STY1095 1074881 - 1072728 - | hypothetical protein TERM 1447 1073309 - 1073298 - G 73 -5.8 -4.41348 | GTCCGGCCAAATAAA GCTG ACCG CAGC CCAGGCGATAGCGCA TERM 1448 1073530 - 1073519 - G 75 -5.8 -4.64846 | overlap 1073520 1073521 GGACAAACCATAAAA TCGG CAGG CCGA TCGCAACGCCTACCA TERM 1449 1073926 - 1073914 - G 83 -10.5 -3.9281 | AGCAGCTCTAAAGAA GCGCC GCT GGCGC GCATACGTTCAAGCG TERM 1450 1074941 - 1074910 - R 72 -6.5 -4.21194 | gap 1, opp_overlap 1074911 1074926, overlap 1074911 CCCGATCATTCAAAA CGGCGGCGCGCG TTAGCTTCT CGCGCGGCGC-G AGCGGTTTCTACAGA yccF 1075346 - 1074900 - | hypothetical protein TERM 1451 1074926 - 1074946 + g 73 -8.9 -3.85698 | opp_overlap 1074910 1074911 GGCGGCGCGCGTTAG CTTCTCGCG CGG CGCGAGCGG TTTCTACAGAGACGA TERM 1452 1076447 - 1076427 - g 78 -2.3 -5.28176 | overlap 1076428 TGTAGCGAGAAAAAA GCGCAGGCC AAA GGCTGGCGT CAGTGGCTGGAAGAG TERM 1453 1077362 - 1077376 + G 77 -8.6 -4.08216 | GGAAAGTGCGCTTTT TCCTCA GGT TGAGGA TTTTCCGGACGCTGA helD 1075470 - 1077524 + | DNA helicase IV TERM 1454 1077554 - 1077526 - T 95 -14.5 -3.61764 | opp_overlap 1077522 1077549, overlap 1077518 1077527 CGAGGAAGCCCTAAA GCGCGGGCGGTAT AGC ATCCCGCCCGCGT AGCGGTTATTTCAGG TERM 1455 1077553 - 1077527 - T 100 -18 -2.76737 | opp_overlap 1077522 1077549, overlap 1077518 1077526 GAGGAAGCCCTAAAG CGCGGGCGGTAT AGC ATCCCGCCCGCG TAGCGGTTATTTCAG TERM 1456 1077549 - 1077559 + T 74 -8.2 -3.9122 | opp_overlap 1077527 1077526, overlap 1077522 GGTATAGCATCCCGC CCGC GTA GCGG TTATTTCAGGCGCTC mgsA 1078018 - 1077560 - | methylglyoxal synthase STY1099 1078775 - 1078113 - | hypothetical protein TERM 1457 1078439 - 1078424 - G 77 -8.2 -4.07568 | opp_overlap 1078430 CGTCGCCGTCCAAAA GCGCCA GACG CGGCGC CGCGTTAAAATGCGA TERM 1458 1078679 - 1078651 - G 70 -6.6 -4.15044 | overlap 1078653 GCGCCGCGTAATAAA GAGCTGGACACC TTTTT GCCGTCCAGCAC CAGCAGATCAACCTC STY1101 1078946 - 1079362 + | hypothetical protein TERM 1459 1079402 - 1079365 - T 73 -4.1 -4.86731 | opp_overlap 1079373, overlap 1079366 1079372 1079373 GCTGGCGAAATAAAA GTTTAAATGGCCGGATA TCGC TCTCCGGCCTTTTACAT ACAATCAGTTACGTA TERM 1460 1079373 - 1079394 + T 83 -10.1 -4.1899 | opp_overlap 1079373 1079372 1079366 1079365 AATAAAAGTTTAAAT GGCCGGATA TCGC TCTCCGGCC TTTTACATACAATCA STY1102 1079724 - 1079407 - | hypothetical protein STY1103 1080993 - 1079782 - | hypothetical protein TERM 1461 1082012 - 1081994 - gH 100 -16 -4.18197 | opp_overlap 1081984 ATTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA 1082125 - 1082583 + | transposase for insertion sequence element IS200 TERM 1462 1082662 - 1082686 + GF 87 -9.9 -4.2461 | opp_overlap 1082665, overlap 1082664 1082665 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTAATCAGCCT TERM 1463 1082664 - 1082684 + GF 93 -12.5 -3.72374 | opp_overlap 1082665, overlap 1082662 1082665 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTAATCAGC TERM 1464 1082665 - 1082683 + GF 93 -16 -2.82942 | opp_overlap 1082665, overlap 1082664 1082662 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAATCAG TERM 1465 1082683 - 1082665 - gf 100 -16 -4.91109 | opp_overlap 1082665 1082664 1082662 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAATCAG STY1106 1081781 - 1083271 + | putative transcriptional regulator STY1110 1083320 - 1083601 + | putative acylphosphatase STY1111 1083927 - 1083598 - | sulfurtransferase TusE TERM 1466 1083662 - 1083693 + g 84 -5.8 -5.06414 | TTTGCCGGGCCTTTC GGGAACAGACGATA CAGA TAGCGGCTGTTGCC TTTTTCTTCGCCGAA TERM 1467 1083998 - 1083973 - R 91 -7.5 -5.15634 | overlap 1083977 CAGTGTAGCAAAAAA TAAAGCCCTGC ATAA GCAGGGCTGGA AGAGGGGAATGTCGA TERM 1468 1083994 - 1083977 - R 100 -12.7 -5.0917 | overlap 1083973 GTAGCAAAAAATAAA GCCCTGC ATAA GCAGGGC TGGAAGAGGGGAATG STY1112 1084673 - 1084014 - | hypothetical protein TERM 1469 1085187 - 1085166 - H 100 -14.5 -4.04806 | opp_overlap 1085166 CGCCAGATTAAACAA GGGGTTACC GAAA GGTAACCCC TTTGTTGTCTATGGA TERM 1470 1085166 - 1085187 + H 100 -14.5 -4.42974 | opp_overlap 1085166 CGCCAGATTAAACAA GGGGTTACC GAAA GGTAACCCC TTTGTTGTCTATGGA TERM 1471 1085224 - 1085206 - H 100 -16 -4.18018 | opp_overlap 1085196 GTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA 1085337 - 1085795 + | transposase for insertion sequence element is200 TERM 1472 1085874 - 1085898 + T 100 -9.9 -5.04249 | opp_overlap 1085877, overlap 1085876 1085877 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTTTGGGCG TERM 1473 1085876 - 1085896 + T 95 -12.5 -4.13692 | opp_overlap 1085877, overlap 1085874 1085877 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTTTGGG TERM 1474 1085895 - 1085877 - T 100 -16 -4.91109 | opp_overlap 1085876 1085874 1085877 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTTGG TERM 1475 1085877 - 1085895 + T 93 -16 -3.06588 | opp_overlap 1085877, overlap 1085876 1085874 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTTGG pipA 1086683 - 1086003 - | hypothetical protein pipB 1087781 - 1086906 - | hypothetical protein TERM 1476 1088172 - 1088160 - R 72 -4.8 -4.59109 | TAGATGGCGTAAAAA CCTG ATGAG CAGG AATACTTACACACTA sigE 1088670 - 1088329 - | cell invasion protein sigD 1090372 - 1088687 - | cell invasion protein TERM 1477 1090738 - 1090750 + G 74 -3.4 -4.88228 | CGAGTAAGACCGTGA CGAA GAATA TTCG TTTTTCCTATTCCAT STY1124 1090704 - 1090874 + | hypothetical protein STY1125 1090985 - 1090875 - | hypothetical protein pipD 1092563 - 1091094 - | putative secreted peptidase TERM 1478 1091654 - 1091664 + g 85 -4.6 -5.14563 | TTCCCTGATAGTGAT TGCG TAA CGCG TTTTTTACTGCCGCC TERM 1479 1092168 - 1092178 + g 72 -2.4 -4.85599 | CTCAATGGCGTCTTC CGTG ATT CCCG TTTTTGTCACGTAAG copS 1094100 - 1092736 - | histidine kinase copR 1094773 - 1094093 - | transcriptional regulatory protein YedW STY1129 1094909 - 1095319 + | hypothetical protein hpaC 1096164 - 1095652 - | 4-hydroxyphenylacetate 3-monooxygenase coupling protein hpaB 1097489 - 1096182 - | 4-hydroxyphenylacetate 3-monooxygenase TERM 1480 1097463 - 1097479 + g 91 -12.3 -4.07568 | AGCATCACGCTGTTG GCGCAGA TCG TCTGCGC TTTTCGCCACGCGGA hpcR 1098035 - 1097595 - | homoprotocatechuate degradative operon repressor TERM 1481 1097652 - 1097671 + g 76 -2.9 -5.02074 | gap 1, overlap 1097655 AATAAGATCGTCCAG CAGCAGCA TCAAT TGCTG-TG TTTTTTCGGGCGTGA TERM 1482 1098635 - 1098611 - g 72 -11.5 -3.06696 | overlap 1098634 GCCTGCCGGAAGAGA GCTTTTATCGC CCG GCGATTAAAGC GAAATGTCGCGATGG TERM 1483 1099296 - 1099286 - g 87 -8.2 -4.56775 | opp_overlap 1099290 1099293 ATCTGCGGGTAAAAA GCCG CGA CGGC CTGACGCCGATAGGC hpaG 1098310 - 1099599 + | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase hpcB 1101063 - 1101914 + | 3,4-dihydroxyphenylacetate 2,3-dioxygenase hpcD 1101924 - 1102304 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase TERM 1484 1102526 - 1102505 - g 71 -4.3 -4.60889 | overlap 1102492 1102507 AATCAGGCTGAAAAA CAGCGTGAA CAGA TTCGCGCAG TGTCGCTGGATTATC hpcG 1102448 - 1103251 + | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase TERM 1485 1103294 - 1103270 - g 72 -2.1 -4.88129 | overlap 1103263 1103271 1103282 1103292 AAAAACGATGAAAAA TGCTTTCAAAG ACG CGTTAAAAGCG GGGCGCCCGCAAATC TERM 1486 1103304 - 1103292 - g 86 -10.5 -4.11773 | overlap 1103271 1103270 1103282 AAAGACGCGTTAAAA GCGGG GCG CCCGC AAATCGGTTTGTGGC hpcH 1103262 - 1104053 + | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 1487 1104719 - 1104740 + G 73 -5.1 -4.65747 | overlap 1104717 TGGCAGTGGTTATTC CTGTTGGAA GGAT TTCCGTCAG TTTTGTTAGGCATTA hpaX 1104125 - 1105501 + | putative 4-hydroxyphenylacetate permease TERM 1488 1105617 - 1105651 + G 86 -6.5 -5.0538 | gap 1, overlap 1105618 GTATGGCGGATTTCT TTGGTCGTGAT-ATGC AGGC GCATCGCCACGACCAG TTTTTTCAAATGCAC hpaA 1105511 - 1106407 + | 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein TERM 1489 1106384 - 1106394 + F 72 -5.4 -4.4009 | overlap 1106373 1106364 CAGTTTCGCCAACGT GAAG TTC CTTC TTTTCTCAACTAAGA TERM 1490 1106981 - 1107001 + G 71 -6.2 -4.30576 | gap 1 TTCCCCTTTCCCGGA CGGTGAAGC GTTT GCTT-ACCG TTTTGATACTCAGGG TERM 1491 1107170 - 1107157 - g 72 -3.8 -4.74103 | TTGGCAACGGAAAAA CGCT GGCTGA AGCG ATTGCGTCGCATCAC STY1143 1106421 - 1107359 + | hypothetical protein TERM 1492 1107378 - 1107411 + T 79 -8.9 -4.11216 | gap 1, opp_overlap 1107379 1107380 1107383, overlap 1107383 1107398 1107410 TCAGGGCAGGGGTAA AC-CAACGGGCTGACA TCA TGTCAGCCCGTTATGC TTTTGGCGATCAGCA TERM 1493 1107409 - 1107379 - T 95 -14.8 -3.57462 | opp_overlap 1107378 1107383 1107398, overlap 1107380 1107383 CAGGGCAGGGGTAAA CCAACGGGCTGACA TCA TGTCAGCCCGTTAT GCTTTTGGCGATCAG TERM 1494 1107408 - 1107380 - T 100 -18.3 -2.74263 | opp_overlap 1107378 1107383 1107398, overlap 1107379 1107383 AGGGCAGGGGTAAAC CAACGGGCTGACA TCA TGTCAGCCCGTTA TGCTTTTGGCGATCA TERM 1495 1107405 - 1107383 - T 100 -17.8 -3.52204 | opp_overlap 1107378 1107383 1107398, overlap 1107380 1107379 GCAGGGGTAAACCAA CGGGCTGACA TCA TGTCAGCCCG TTATGCTTTTGGCGA TERM 1496 1107383 - 1107405 + T 100 -17.8 -3.68359 | opp_overlap 1107383 1107380 1107379, overlap 1107378 1107398 GCAGGGGTAAACCAA CGGGCTGACA TCA TGTCAGCCCG TTATGCTTTTGGCGA TERM 1497 1108763 - 1108734 - T 82 -11.4 -3.64703 | gap 1, opp_overlap 1108735, overlap 1108719 1108735 CCGGGTGTATGTAAA TCCG-GGGTGGGC AGAAA GCCCACCCTCGGT TTATTGCCTTTATCG TERM 1498 1108735 - 1108762 + T 100 -14.9 -4.30933 | gap 1, opp_overlap 1108719 1108734 1108735 CGGGTGTATGTAAAT CCG-GGGTGGGC AGAAA GCCCACCCTCGG TTTATTGCCTTTATC TERM 1499 1108762 - 1108735 - T 87 -14.9 -2.78679 | gap 1, opp_overlap 1108735, overlap 1108719 1108734 CGGGTGTATGTAAAT CCG-GGGTGGGC AGAAA GCCCACCCTCGG TTTATTGCCTTTATC yccD 1109088 - 1108783 - | chaperone-modulator protein CbpM cbpA 1110008 - 1109088 - | curved DNA-binding protein CbpA TERM 1500 1109599 - 1109617 + g 74 -7.4 -4.1552 | overlap 1109596 GAATAGCTAATCGTA CGCTGG TGCTCTT CCAGCG TTTCTTCCAGGAATA scsA 1110244 - 1110606 + | membrane protein, suppressor for copper-sensitivity A TERM 1501 1111781 - 1111792 + G 72 -3.6 -4.74103 | TGTTGTTTAGCGCCA GCCT GTTC GGGC TTTTTGAGTTCAGGC TERM 1502 1111878 - 1111904 + G 71 -10.2 -3.29043 | gap 1, overlap 1111884 1111896 ACATTTCTGGCAGGG GGCGTTCGCCA CGCTGC TGGCGA-CGCC TTGTAGCGCGCCGTT TERM 1503 1111940 - 1111977 + G 95 -14.1 -3.37612 | overlap 1111942 GCACGGCGGTCGCGG TGGCGCTCACGGCGTCG CTGC CGACGCTGTGGGGGCTG TTCCTTGCGCTTGGC TERM 1504 1111942 - 1111975 + G 100 -16.7 -3.25539 | overlap 1111940 ACGGCGGTCGCGGTG GCGCTCACGGCGTCG CTGC CGACGCTGTGGGGGC TGTTCCTTGCGCTTG scsB 1110655 - 1112541 + | membrane protein, suppressor for copper-sensitivity B precursor scsC 1112538 - 1113161 + | secreted protein, suppressor for copper-sensitivity C precursor TERM 1505 1113151 - 1113138 - f 83 -4.5 -5.27335 | overlap 1113139 GTGGTGAAAGAAAAA CTGGC GGCT GCCAA TGGCGGGTAAACTGC TERM 1506 1113163 - 1113190 + G 77 -4.8 -4.84359 | gap 1 CCAATGGCGGGTAAA CTGCGGCGTTGGC TGC GTGAA-GCCGCGG TTTTTCTGGCGCTCC scsD 1113151 - 1113657 + | secreted protein, suppressor for copper-sensitivity D TERM 1507 1113682 - 1113661 - f 82 -12.9 -3.03903 | opp_overlap 1113656 1113655 AAAACGTTCTGAATA TGCGCCGGG GTTT CCCGGCGCT AACGCGTTTACTGTA agp 1113790 - 1115031 + | glucose-1-phosphatase/inositol phosphatase TERM 1508 1115037 - 1115058 + T 100 -15.1 -4.28791 | opp_overlap 1115032 1115029, overlap 1115038 TGCAAAATAGCCGTA TGCCCCCGC GCAG GCGGGGGCG TTTGTGTTATACGTT TERM 1509 1115038 - 1115057 + T 100 -16.4 -3.1619 | opp_overlap 1115032 1115029, overlap 1115037 GCAAAATAGCCGTAT GCCCCCGC GCAG GCGGGGGC GTTTGTGTTATACGT STY1154 1115292 - 1115065 - | hypothetical protein wrbA 1115909 - 1115313 - | TrpR binding protein WrbA STY1156 1116294 - 1116461 + | hypothetical protein TERM 1510 1116521 - 1116538 + F 100 -14.1 -6.02919 | CGTCATGCGCCACCG CCGCCGG ATTT CCGGCGG TTTTTTTGTTTATAA TERM 1511 1117038 - 1117021 - g 74 -3.4 -4.84527 | gap 1 TTGATAGATGAAAAA TCCGCGC TGATT GC-CGGA TGGGTGCACAGCGGG STY1157 1116598 - 1117236 + | putative transcriptional regulator STY1158 1117628 - 1117233 - | putative secreted protein TERM 1512 1117401 - 1117427 + g 73 -5.2 -4.62783 | gap 2, opp_overlap 1117385 CGCGCAATCGGCGTC GCGCA-G-GGCA ATCCA TGCCACCTGCGC TTTTTGCAATAGCTC TERM 1513 1117670 - 1117653 - R 93 -9.1 -4.7373 | opp_overlap 1117653 TGACGCGAGTAAAAA GGCTCCA TTGA CGGAGCC TTAATTAACCACAGT TERM 1514 1117710 - 1117732 + r 75 -9.8 -3.59979 | TTGTCATCAGGCTGG CATTACCGCC AGC GGCGGCAGTG TTTACGCTCAGCGAA putA 1121649 - 1117687 - | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1515 1121500 - 1121512 + g 74 -7.7 -4.1585 | overlap 1121497 CGCAGGTAGCTCCGG TAGCG TAT CGCTA TTTTCCAGCTTGTCC TERM 1516 1122184 - 1122202 + G 70 -6.6 -4.19371 | overlap 1122199 TGACTATATTCTTGG CGGTCGCA GCC TGGGGCCG TTTGTTACGGCTTTA putP 1122071 - 1123579 + | sodium/proline symporter (proline permease) TERM 1517 1123586 - 1123613 + F 72 -9.2 -3.63744 | opp_overlap 1123584 1123581, overlap 1123584 1123588 GCGGAATAACCGACA TGTCCGATAGCA TTAT TGCCATCGGATA TATTTTACCAGGCGG TERM 1518 1123588 - 1123611 + F 73 -9.6 -3.39908 | opp_overlap 1123584 1123581, overlap 1123586 1123584 GGAATAACCGACATG TCCGATAGCA TTAT TGCCATCGGA TATATTTTACCAGGC TERM 1519 1123621 - 1123646 + F 90 -15.5 -2.66964 | gap 1, opp_overlap 1123616, overlap 1123618 ATCGGATATATTTTA CCAGGC-GGCGT TAT ACGCCTGCCTGG TCCTCTGATAAGTCC TERM 1520 1124385 - 1124370 - f 74 -5.4 -4.56597 | overlap 1124379 GCGTCGTTTCAAAAA GCAAGC TAAG GCTTAC AAGGAAGCCAACCCT TERM 1521 1125218 - 1125228 + G 71 -8.2 -3.85698 | CAAAGACGACTGCGT GCGC TCG GCGC TTTGTCAGCGAACGC phoH 1124406 - 1125260 + | hypothetical protein TERM 1522 1125276 - 1125299 + T 95 -14.6 -3.58905 | opp_overlap 1125268, overlap 1125280 TATAGCATTGACTTT CAGAGCCCGG GAGA CCGGGCTTTG TTGTCTATAAAGCGT TERM 1523 1125280 - 1125295 + T 100 -11.8 -4.42974 | opp_overlap 1125268, overlap 1125276 GCATTGACTTTCAGA GCCCGG GAGA CCGGGC TTTGTTGTCTATAAA STY1163 1126247 - 1125366 - | putative transcriptional regulator STY1164 1127390 - 1126533 - | putative membrane transporter TERM 1524 1126768 - 1126754 - G 74 -2.8 -4.86731 | CTCGTTTAAAGAAAA TGCCCA GCA TGAACA GACCGGTCATTGGCC STY1165 1128030 - 1127503 - | putative membrane transporter TERM 1525 1128193 - 1128172 - R 79 -8.7 -4.24948 | TCATGAGATGTAAAA GGCAGAGCA TTTA TGCTCCACC AATGGTGATGCCCAG STY1166 1129047 - 1128367 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 1526 1128979 - 1129006 + g 71 -6.3 -4.35518 | gap 1 AGGGCTGCCTGGTAC CGGTTGGCATGA GACAA TCA-GCCCACCG TTTTCGTGTACACTT TERM 1527 1129889 - 1129877 - g 100 -5.5 -5.81412 | CGTAGGGAAAAAAAA CAGTG AAT CACCG TTGCAGGTTTATAGC TERM 1528 1130674 - 1130692 + G 71 -6.1 -4.25056 | CGTCTGTAACCTCCT TTACCAT GCGTG ATGGTAA TTTATTAATAAAATA STY1167 1129554 - 1130708 + | hypothetical protein STY1168 1130754 - 1131446 + | putative secreted protein STY1169 1131729 - 1133009 + | putative sialic acid transporter TERM 1529 1133835 - 1133822 - g 81 -2.4 -5.41746 | overlap 1133826 AAGCGGGCAAAAAAA CACA CTTTCT TGTG CATGAAAGCCAGGCG STY1170 1133023 - 1134126 + | putative oxidoreductase TERM 1530 1134264 - 1134245 - f 100 -10 -5.47399 | opp_overlap 1134245 1134243 TTAATGCGAAAAAAA GCCCGTAC ATTC GTACGAGC TCTTTCTTAAATATG TERM 1531 1134448 - 1134429 - f 100 -12.2 -4.9755 | ACATATAAGCAAAAA GCCTGTAC TTCT GTACAGGC TCTCAACTTGAAGAT TERM 1532 1134633 - 1134614 - f 100 -12.2 -4.9755 | ACATATAAGCAAAAA GCCTGTAC TTCT GTACAGGC TCTCAACTTGAAGAT TERM 1533 1134818 - 1134799 - f 100 -12.2 -4.9755 | ACATATAAGCAAAAA GCCTGTAC TTCT GTACAGGC TCTCAACTTGAAGAT TERM 1534 1135003 - 1134984 - f 100 -12.2 -4.9755 | ACATATAAGCAAAAA GCCTGTAC TTCT GTACAGGC TCTCAACTTGAAGAT STY1172 1135341 - 1136279 + | putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region TERM 1535 1136286 - 1136301 + F 86 -11.8 -3.64703 | opp_overlap 1136286, overlap 1136300 GGATATTGATATCAA CCCGGC GCGG GCCGGG TTTCGCTAAAAAACG TERM 1536 1136301 - 1136286 - f 79 -11.8 -3.28912 | opp_overlap 1136286 1136300 GGATATTGATATCAA CCCGGC GCGG GCCGGG TTTCGCTAAAAAACG TERM 1537 1136967 - 1137001 + G 80 -8.7 -4.08216 | gap 1, opp_overlap 1136976 TTTACGCTTGGCGAT TTCACCGAATGCCGGA AAAT TCTGG-ATGCGGTGAA TTTTCCGGAAGATCG STY1173 1136364 - 1137101 + | putative hydrolase STY1174 1137125 - 1137679 + | hypothetical protein TERM 1538 1138070 - 1138080 + G 74 -3.2 -4.87892 | GTGTATCCAGGCAAA GCAG CTA TTGC TTTCTTTTGTTCCGG STY1175 1137732 - 1138262 + | hypothetical protein TERM 1539 1138267 - 1138286 + T 100 -15 -4.07455 | opp_overlap 1138267 TCACAAAATAAAAAA GCGTGGGG TTTT CCCCACGC TTTGTCGTATTCATC TERM 1540 1138286 - 1138267 - T 100 -15 -5.86976 | opp_overlap 1138267 TCACAAAATAAAAAA GCGTGGGG TTTT CCCCACGC TTTGTCGTATTCATC csgG 1139133 - 1138300 - | assembly/transport component in curli production csgF 1139576 - 1139160 - | curli assembly protein CsgF csgE 1139998 - 1139603 - | curli assembly protein CsgE csgD 1140653 - 1140027 - | DNA-binding transcriptional regulator CsgD TERM 1541 1140396 - 1140417 + g 73 -5.3 -4.62471 | opp_overlap 1140396 GTCAGGGGTATTTAA CAATAATGT TTTT ATATTATTG TTTTTGCGGCTTAAA TERM 1542 1140792 - 1140779 - H 73 -2.5 -5.24799 | opp_overlap 1140779 CCAGAAAGAGAAAAA TATTT ACGA AAATA CTTTTAACTGTTTTC TERM 1543 1140978 - 1140990 + H 72 -4.9 -4.60317 | ATTATAATAATTCAT TGATT TTT AATCA TTTTAATTATTGTAT csgB 1141409 - 1141864 + | curlin minor subunit csgA 1141906 - 1142361 + | cryptic curlin major subunit TERM 1544 1142402 - 1142387 - f 100 -10.4 -5.7946 | opp_overlap 1142387 GCGCTAATAAAAAAA CAGGGC GTAA GCCCTG TTTTTTTTCGGGAGG TERM 1545 1142387 - 1142402 + F 100 -10.4 -5.75342 | opp_overlap 1142387 GCGCTAATAAAAAAA CAGGGC GTAA GCCCTG TTTTTTTTCGGGAGG STY1182 1142423 - 1142749 + | putative autoagglutination protein STY1183 1142881 - 1143201 + | hypothetical protein STY1184 1143268 - 1143828 + | hypothetical protein TERM 1546 1143848 - 1143834 - gT 77 -7.8 -4.36914 | CCCTGCCTGATAAAA CACGCC TGG AGCGTG CCGTTGAACCGCTAT TERM 1547 1144516 - 1144504 - gT 70 -9.1 -3.31144 | opp_overlap 1144502 1144505, overlap 1144512 1144515 CCGTTATCTGCATAA GCTGG AAA CCAGC CAGTTTATGGCGGAT TERM 1548 1145055 - 1145070 + GT 74 -7.6 -4.07568 | opp_overlap 1145068 GTGAAACGCTGGCGA CGCTTA TTCA TAAGCG TTTTACGCAGAGCCA TERM 1549 1145207 - 1145177 - gT 83 -8.2 -4.42464 | opp_overlap 1145180 AAGGTGTTAAAGAAA GAACCCGCTACGCG TTT CTGGCAGCGAGTTC TGGTACGGTTGGCGG STY1185 1143764 - 1145251 + | hypothetical protein mdoC 1146422 - 1145268 - | glucans biosynthesis protein mdoG 1146694 - 1148229 + | glucan biosynthesis protein G TERM 1550 1148329 - 1148292 - g 77 -8.6 -4.09685 | gap 3, opp_overlap 1148324, overlap 1148296 CGGCATTGCCGAAAA CT-GACATCC-GCGCCGTG CAT CA-GGCGCTGGATGCCGAG CATCGGACTTACTCG TERM 1551 1148634 - 1148609 - g 72 -3.9 -4.7497 | opp_overlap 1148620, overlap 1148610 GCGAGTGAGCAAAAA TGGCGTACCGT CGGC ACTATACGCCG CTATATTTTGTTAAT TERM 1552 1149220 - 1149195 - g 73 -6.1 -4.37711 | opp_overlap 1149196 GTATGAAACGCAAAA GCGGCAATATT GACG ATTTTTGCCGC CGCTGGGGCAATCAG mdoH 1148222 - 1150765 + | glucosyltransferase MdoH TERM 1553 1150813 - 1150795 - f 93 -10.3 -4.62783 | opp_overlap 1150795 GAGTGAGGTGAAAAA TACCGGC GTGAT GCCGGTA TTTTTATAGTGAAAT TERM 1554 1150795 - 1150813 + F 100 -11 -4.91511 | opp_overlap 1150795 GAGTGAGGTGAAAAA TACCGGCG TGA TGCCGGTA TTTTTATAGTGAAAT STY1189 1150839 - 1151066 + | hypothetical protein msyB 1151441 - 1151067 - | hypothetical protein yceE 1152737 - 1151523 - | drug efflux system protein MdtG TERM 1555 1152867 - 1152886 + r 78 -12.2 -2.64616 | opp_overlap 1152867 AAAAGAGGGGAAAAA TTGCAGCC TGAC GGCTGCAA TCCTGTCAATAGCGC TERM 1556 1152886 - 1152867 - R 100 -12.2 -4.69464 | opp_overlap 1152867 AAAAGAGGGGAAAAA TTGCAGCC TGAC GGCTGCAA TCCTGTCAATAGCGC htrB 1153812 - 1152892 - | lipid A biosynthesis lauroyl acyltransferase STY1193 1154032 - 1155084 + | hypothetical protein TERM 1557 1155090 - 1155123 + T 100 -19 -3.53761 | opp_overlap 1155087 GGCTGAGTAATATTT TGCCGGATAGCGGC GTAAAG GCTGCTATCCGGCA TTTCGCCAGGCGTTA STY1194 1155711 - 1155136 - | hypothetical protein TERM 1558 1155506 - 1155517 + g 85 -2.2 -5.52384 | overlap 1155504 GTCACATTCACTTTG TCTG CTGA CGGA TTTTTTTCGTCAAAA TERM 1559 1156245 - 1156266 + r 71 -3.7 -4.75174 | GAGGGCGGCGGAAAC TACGCCATA ACGT TGTGGAGTA TTTTTAAATTGCATA STY1197 1156656 - 1156543 - | hypothetical protein TERM 1560 1156691 - 1156673 - R 83 -9.5 -4.1822 | GCTTACCTTAATAAA CAGCCCC TTTAC GGGGCCG ACAAATTATTGGCTA TERM 1561 1156727 - 1156717 - R 72 -8.2 -3.76413 | GGCTAAAACGGGAAA GCCG GAA CGGC GTCAGATCAAAGGAG solA 1157815 - 1156697 - | N-methyltryptophan oxidase TERM 1562 1156933 - 1156917 - G 71 -7.9 -3.96216 | opp_overlap 1156917 GCCCCATGTAAACAA CCGCCGA TAC CCGGCAG TACGTTACGCAGGAA TERM 1563 1157426 - 1157407 - G 80 -12.2 -3.36694 | overlap 1157405 AGTCAGCTTCAAACA GCCCGATA TAAT TATCGGGC ACGCGAATTTCCGGC TERM 1564 1157904 - 1157889 - R 71 -10.4 -2.73799 | overlap 1157886 1157885 GCCAGAAATAAGTGA GGCACC TTAC GGTGCC TGAGAGAGGGGGAGC bssS 1158182 - 1157928 - | biofilm formation regulatory protein BssS TERM 1565 1158445 - 1158430 - R 100 -11.8 -5.63517 | TGCGCAAATAAAAAA GCCGGG GCGA CCCGGC AAACATACATCACTG dinI 1158717 - 1158472 - | DNA damage-inducible protein I pyrC 1159837 - 1158791 - | dihydroorotase TERM 1566 1159381 - 1159371 - G 81 -8.2 -4.37092 | overlap 1159372 ACGGTGTCGATAAAA CGCG CTT CGCG ATCGAAGATATCAAC TERM 1567 1159933 - 1159918 - R 100 -11.8 -5.47218 | TTGCACGTAAAAAAA GGGCGC GAGC GCGCCC TCCGAAATCAATTGG yceB 1160567 - 1159941 - | hypothetical protein TERM 1568 1160615 - 1160593 - R 100 -10.6 -4.77925 | opp_overlap 1160612 AAAAAAGCTGAAAAA GGCGGCAA GAAAGGG TTGCCGCC TGGCGGGCGTTAGAT grxB 1161272 - 1160625 - | glutaredoxin 2 TERM 1569 1161123 - 1161135 + g 74 -7.7 -4.10161 | ATCATCTTTTTGCAG GATGG GCA CCATC TTTTGACCAATCATC STY1204 1162544 - 1161336 - | multidrug resistance protein MdtH rimJ 1162781 - 1163365 + | ribosomal-protein-S5-alanine N-acetyltransferase TERM 1570 1163763 - 1163738 - g 81 -11.8 -3.53012 | opp_overlap 1163722 1163725 TGCGCGGCGCGCAAA CGCCCGGCGA GTTGCG TAGCCGGGCG TCGCGGATGCATGAA STY1206 1163401 - 1164048 + | hypothetical protein mviM 1164050 - 1164973 + | putative virulence factor MviM TERM 1571 1165384 - 1165396 + G 90 -6.2 -5.28826 | overlap 1165393 TTTTGGCGCAGGGAT GGCG ACCGA CGCC TTTTTTGTGGCGTTT TERM 1572 1166232 - 1166255 + G 78 -12.4 -3.28712 | GCTTTTTACTGGCGT TGCCGAGCGC GGTA GCGCTAGGCA TTCTGGCGAAGCCGC mviN 1165319 - 1166812 + | virulence factor MviN TERM 1573 1166845 - 1166818 - T 71 -10.7 -2.64472 | gap 1, opp_overlap 1166816, overlap 1166814 GACGGCGTAAATTCA GTGCCTGATAGC GCTGT GCTATCAGGC-C TACAAGGCATTCAGG flgN 1167316 - 1166894 - | flagella synthesis protein FlgN TERM 1574 1167051 - 1167063 + g 100 -9.1 -5.1101 | TGCTGGTTGAGGTCG CGCAG ATG CTGCG TTTTTTCGGTAATCG flgM 1167614 - 1167321 - | anti-sigma28 factor FlgM TERM 1575 1167504 - 1167517 + g 81 -3.8 -5.14563 | overlap 1167507 CGTTACGCTGGCGCT CGTC GCGGCG GACG TTTTTTCCTGACGCG TERM 1576 1167507 - 1167532 + g 78 -2.5 -5.24129 | gap 1, overlap 1167504 TACGCTGGCGCTCGT CGCGGC-GGA CGTTTTT TCCTGACGCG TTTTTTGTACCGGCG flgA 1168365 - 1167706 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1577 1167771 - 1167784 + g 77 -8.1 -4.07568 | overlap 1167771 TTTGACCCGATGTCA TGCGC ACGC GCGCA TTTTGCGCGACGGCG TERM 1578 1168341 - 1168331 - G 74 -8.2 -3.92324 | overlap 1168332 GGGCTGAACAGCAAA GCCG CCA CGGC GAATCCTCGTTTTAA TERM 1579 1168439 - 1168449 + H 71 -6.8 -4.1552 | CGCAATAAATAGCGA CGCA TTT TGCG TTTATTCCGGCGATA flgB 1168522 - 1168938 + | flagellar basal body rod protein FlgB flgC 1168942 - 1169346 + | flagellar basal body rod protein FlgC flgD 1169358 - 1170056 + | flagellar basal body rod modification protein flgE 1170083 - 1171294 + | flagellar hook protein FlgE TERM 1580 1171409 - 1171450 + G 74 -11.5 -3.18507 | gap 1 CTAATGCCTCAACGC CGGGCTTTCGCGCGCAGC TTAACGC GCTACGCGCG-GTGCCCG TTGATGGCCTCTCTT flgF 1171315 - 1172070 + | flagellar basal body rod protein FlgF flgG 1172084 - 1172866 + | flagellar basal body rod protein FlgG TERM 1581 1172869 - 1172900 + F 75 -11.4 -3.09004 | overlap 1172864 GACGCAACTCTAAGG GGCCGCCGGTGGGG GATA CGCCACCGGCTCCC TGATTTTGAAGATGA TERM 1582 1172946 - 1172930 - g 70 -2.9 -4.75776 | overlap 1172932 1172933 AAGGTAATGCAAAAA TACGCGC TTC ACGCTTA CCCAGTTATGGCCCT flgH 1172921 - 1173619 + | flagellar basal body L-ring protein flgI 1173625 - 1174728 + | flagellar basal body P-ring protein TERM 1583 1175178 - 1175146 - g 100 -21.3 -4.24606 | opp_overlap 1175173 AAGCCATACCGAAAA CGCCGGACAGCAGCG ATG CGCCGCTCTCCGGCG ACAGTAAAGACTTTC TERM 1584 1175247 - 1175236 - g 74 -7.2 -4.20516 | opp_overlap 1175235 TGGCCAGCGAACAAA GCGG GGTG CCGC ATCATCTGATTCTGG flgJ 1174728 - 1175678 + | peptidoglycan hydrolase TERM 1585 1176031 - 1176017 - g 81 -8.6 -4.24342 | overlap 1176030 CGCGCTATGAACAAA TGTCGA AAA TCGACA ACCTGCTGGCCGATA flgK 1175743 - 1177404 + | flagellar hook-associated protein FlgK TERM 1586 1178101 - 1178091 - g 87 -2.4 -5.61881 | GTGGAAAAAGAAAAA GCCG CTG CCGC CATTGATAAAACCAA flgL 1177419 - 1178372 + | flagellar hook-associated protein FlgL TERM 1587 1178416 - 1178444 + F 100 -14.6 -5.4251 | TGGATATGTTTTGTC TGCCCGCGCC ATCCACCCC GGCGCGGGCA TTTTTTGTCTATGGA TERM 1588 1178481 - 1178463 - f 100 -16 -4.18018 | opp_overlap 1178453 TTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA 1178594 - 1179052 + | transposase for insertion sequence element IS200 TERM 1589 1179131 - 1179155 + T 90 -9.9 -4.53349 | opp_overlap 1179134, overlap 1179133 1179134 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTAGTCGTTA TERM 1590 1179133 - 1179153 + T 95 -12.5 -3.86206 | opp_overlap 1179134, overlap 1179131 1179134 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTAGTCGT TERM 1591 1179152 - 1179134 - T 100 -16 -4.91109 | opp_overlap 1179133 1179131 1179134 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTAGTCG TERM 1592 1179134 - 1179152 + T 93 -16 -2.90639 | opp_overlap 1179134, overlap 1179133 1179131 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTAGTCG TERM 1593 1179323 - 1179306 - T 100 -12.7 -5.96219 | opp_overlap 1179306 GAGGCATAAAAAAAA GCCGACC TGGC GGTCGGC TTTGTATCAGCATTT TERM 1594 1179306 - 1179323 + T 95 -12.7 -4.05322 | opp_overlap 1179306 GAGGCATAAAAAAAA GCCGACC TGGC GGTCGGC TTTGTATCAGCATTT rne 1182545 - 1179342 - | ribonuclease E TERM 1595 1180739 - 1180751 + g 76 -3.3 -5.11112 | GCTTGCGACGATCCT GCTGA CGC TCCGC TTTTTCTTCCGCTTT TERM 1596 1181447 - 1181463 + g 71 -5.8 -4.36914 | CCCGGTCCTGACGCA CCGCTT CACGC AGGCGG TTTTCTACCGCGCGC STY1226a 1182681 - 1182929 + | hypothetical protein rluC 1183119 - 1184078 + | 23S rRNA pseudouridylate synthase C TERM 1597 1184097 - 1184073 - T 72 -8.5 -3.77196 | opp_overlap 1184066 GTATTACGTAGTAAA GCCTGATGCGC GTT GCTTATCAGGC CTACAATCGTGTGAT TERM 1598 1184143 - 1184131 - T 70 -9.1 -3.30124 | opp_overlap 1184142 CCGTAGGCCTGATAA GACGC ATC GCGTC GCCATCAGGCAGATT maf 1184745 - 1184161 - | Maf-like protein TERM 1599 1184875 - 1184903 + H 83 -10.3 -3.74077 | opp_overlap 1184881, overlap 1184881 GTGTGCGAATTATTG GCAAAAGGCAACC GCA GGCTGCCTTTTTC TTTGACTATATGACG TERM 1600 1184881 - 1184897 + H 95 -7.9 -5.31519 | opp_overlap 1184881, overlap 1184875 GAATTATTGGCAAAA GGCAACC GCA GGCTGCC TTTTTCTTTGACTAT TERM 1601 1184897 - 1184881 - H 83 -10.1 -4.12902 | opp_overlap 1184875 1184881 GAATTATTGGCAAAA GGCAACC GCA GGCTGCC TTTTTCTTTGACTAT STY1229 1184943 - 1185464 + | hypothetical protein rpmF 1185516 - 1185689 + | 50S ribosomal protein L32 TERM 1602 1186660 - 1186649 - g 90 -5.8 -5.24129 | GTTGGTTACAAAAAA GCCT GACG AGGC GATTCAGTCACCTCA plsX 1185823 - 1186902 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 1186982 - 1187935 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1603 1188163 - 1188176 + G 71 -9.5 -3.53012 | opp_overlap 1188153 ATTAACCGCTTCCGT CGCGC TTTG GCGCG TTTGGCAGCAGCAGG fabD 1187951 - 1188880 + | acyl carrier protein S-malonyltransferase fabG 1188893 - 1189627 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 1189783 - 1190019 + | acyl carrier protein TERM 1604 1190055 - 1190027 - f 71 -9.6 -3.15056 | gap 1, opp_overlap 1190028 1190031, overlap 1190025 AGGCGTAAGTGAACA TCTCCAGGCGGTC GTTC GACCGCCTG-AGT TTTATCTTTTTGTCC TERM 1605 1190028 - 1190054 + F 100 -13.1 -5.02287 | gap 1, opp_overlap 1190027 1190025, overlap 1190031 GGCGTAAGTGAACAT CTCCAGGCGGTC GTTC GACCGCCTG-AG TTTTATCTTTTTGTC TERM 1606 1190031 - 1190052 + F 90 -15.9 -2.72919 | opp_overlap 1190027 1190025, overlap 1190028 GTAAGTGAACATCTC CAGGCGGTC GTTC GACCGCCTG AGTTTTATCTTTTTG TERM 1607 1190774 - 1190749 - g 85 -12.5 -3.51329 | GACCCGCAACGATAA CCCACAGGCGG CGAG CCGTCCGTGGG ATAAAGAACGCGATG fabF 1190105 - 1191346 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1608 1191376 - 1191392 + F 87 -7.2 -5.24531 | opp_overlap 1191376 1191370 AGACATTAATAAAAA GGTCCG CTTGT CGGGCC TTTTTTATCAGGCAT TERM 1609 1191392 - 1191376 - f 81 -5 -5.17744 | opp_overlap 1191376, overlap 1191370 AGACATTAATAAAAA GGTCCG CTTGT CGGGCC TTTTTTATCAGGCAT pabC 1191470 - 1192279 + | 4-amino-4-deoxychorismate lyase TERM 1610 1192374 - 1192357 - g 77 -11.3 -3.57144 | GTGGGGATGTGGAAA GTTCGCC ATCT GGCGAAC AGCACGTTACTTATT STY1238 1192282 - 1193298 + | hypothetical protein TERM 1611 1193745 - 1193732 - g 83 -9.5 -4.08692 | opp_overlap 1193734 1193741 GAAGTCGGGCTAAAA CGCGC CAGA GCGCG CGGCGATTTGGATCG tdk 1193288 - 1193929 + | thymidylate kinase TERM 1612 1193982 - 1193965 - g 76 -5.6 -4.72272 | CCCGCCTATGAAAAA CTGGTA GAAAGT TACCAG GCGGGACGTGGGCAC holB 1193926 - 1194930 + | DNA polymerase III subunit delta' TERM 1613 1195262 - 1195273 + G 71 -7.2 -3.98016 | opp_overlap 1195261 1195262 CCTGAGACCAAAATC CGCC AGCA GGCG TCTTTTATTCATCAT STY1241 1194941 - 1195738 + | putative metallodependent hydrolase TERM 1614 1195810 - 1195783 - f 82 -11.2 -3.59627 | opp_overlap 1195780, overlap 1195774 AGCAAAGCGCGTAAA GTTCACCGCCAC AAAA GGGGCGGTGAGC GAGCTTATGGAAACA TERM 1615 1196877 - 1196860 - g 74 -6.9 -4.24002 | opp_overlap 1196860 TGCTAAACCGGAAAA CCGCGCA AAAG TGGGCGG TATCATGATTTCCGC ptsG 1196033 - 1197466 + | glucose-specific PTS system IIBC components TERM 1616 1197493 - 1197510 + F 100 -12.7 -5.14965 | opp_overlap 1197493, overlap 1197505 1197507 GTTGGGGAGTATTAA GGCAGCC ATTC GGCTGCC TTTTTTAATGGCGCT TERM 1617 1197510 - 1197493 - f 81 -12.7 -3.21099 | opp_overlap 1197493 1197505 1197507 GTTGGGGAGTATTAA GGCAGCC ATTC GGCTGCC TTTTTTAATGGCGCT STY1245 1200068 - 1200427 + | purine nucleoside phosphoramidase STY1246 1200430 - 1200804 + | putative lipoprotein STY1247 1200818 - 1201456 + | putative lipoprotein TERM 1618 1201466 - 1201487 + G 76 -10.9 -3.64984 | gap 1, overlap 1201464 CAATAATCCCTTAAC GCGCGACGAG ATC CT-GTCGCGC TATTTTCCCCAGTAT TERM 1619 1201662 - 1201674 + G 90 -6.2 -5.24129 | TTGCCGGCCAGTCTG GCGC CGCGA GCGC TTTTTTATACGCCAG thiK 1201437 - 1202261 + | thiamine kinase TERM 1620 1203166 - 1203176 + G 70 -6.8 -4.08706 | opp_overlap 1203160 1203166 CCGATCAAAGCAGAA CGTG TTA CACG TTTGTATCATAAAGG STY1249 1202272 - 1203297 + | beta-hexosaminidase STY1250 1203322 - 1203864 + | hypothetical protein TERM 1621 1203903 - 1203918 + F 100 -10.4 -5.67063 | opp_overlap 1203903 TCAGTGACCGGATAA CCAGCC TTGC GGCTGG TTTTTTTATGCTCAA TERM 1622 1203918 - 1203903 - f 77 -10.4 -3.33492 | opp_overlap 1203903 TCAGTGACCGGATAA CCAGCC TTGC GGCTGG TTTTTTTATGCTCAA TERM 1623 1204052 - 1204091 + F 77 -10.4 -3.41982 | opp_overlap 1204048, overlap 1204081 CATTAACGTAACTTG TTGTTAATTAAAGGCTAT ACTA ATAACTTTTAATTAACAA TTGGTTAATAAATTT TERM 1624 1204228 - 1204218 - g 89 -3.2 -5.4505 | GGGCGCAAGAAAAAA GCGA AAA TCAC GCTGGTAGACAGAAA ndh 1204119 - 1205423 + | NADH dehydrogenase TERM 1625 1205431 - 1205460 + F 100 -15.8 -3.3785 | gap 1 TGCATTAATTTTTCT GCGCCTCACCGGC TGCTC GCCGGTGAG-CGC TTCTCCATCACTTGC STY1252 1205600 - 1206139 + | hypothetical protein TERM 1626 1206162 - 1206188 + T 100 -10.1 -5.60993 | opp_overlap 1206162 GTACTCTGCAAGTTA GCCCCTCATTC GCTCA GGCTGAGGGGC TTTTTTTATCCGAAG STY1253 1206848 - 1206213 - | TetR family regulatory protein TERM 1627 1207123 - 1207107 - g 81 -2.1 -5.30575 | GAAAAACGTAAAAAA CCTCATC GCT GCTGCGG TACTGAGTTCGCTCT STY1254 1207090 - 1207347 + | putative secreted protein TERM 1628 1207424 - 1207391 - T 100 -12.5 -5.18726 | opp_overlap 1207397, overlap 1207397 TTGCCACAATAAAAA GAGAAAGCCTCGCGA TGCA TCGCGAGGCTTTTTT GTCAGTCAGCTATTC TERM 1629 1207418 - 1207397 - T 100 -15.9 -4.64423 | opp_overlap 1207397, overlap 1207391 CAATAAAAAGAGAAA GCCTCGCGA TGCA TCGCGAGGC TTTTTTGTCAGTCAG TERM 1630 1207397 - 1207418 + T 100 -15.9 -5.28176 | opp_overlap 1207391 1207397 CAATAAAAAGAGAAA GCCTCGCGA TGCA TCGCGAGGC TTTTTTGTCAGTCAG STY1255 1208235 - 1207444 - | hypothetical protein TERM 1631 1208021 - 1208049 + g 76 -3.2 -5.03314 | gap 1, opp_overlap 1208028, overlap 1208023 ATGCCGGGGTTGGCC TGTAAC-AGGGCT AAAA AGCCCACGTTATA TTTTTTGGCGATCGC TERM 1632 1208379 - 1208345 - R 85 -12.2 -3.39429 | gap 1, opp_overlap 1208343 1208343, overlap 1208343 1208348 AAGAATTTGTAAAGA TTAGGCCGGGCG-CA GAGTAA TGACGCCCGGCCTGA CGCTTATGCAATAGC TERM 1633 1208376 - 1208348 - R 84 -13.9 -2.85069 | gap 1, opp_overlap 1208343 1208343, overlap 1208345 1208343 AATTTGTAAAGATTA GGCCGGGCG-CA GAGTAA TGACGCCCGGCC TGACGCTTATGCAAT mfd 1211829 - 1208383 - | transcription-repair coupling factor TERM 1634 1209345 - 1209357 + g 83 -10.5 -4.01564 | overlap 1209335 GCACCAGTTCCGCCA GCCGC TCT GCGGC TTTCTGAATATTTTC TERM 1635 1210168 - 1210197 + g 82 -11.4 -3.85698 | gap 1, overlap 1210183 1210183 TTCCGCCGCTTTCTG CCGGGCGCGCGAC CAGGC GTCGC-CGCCCAG TTTATGCAGCGGCGC TERM 1636 1210597 - 1210610 + g 72 -3.8 -4.82901 | overlap 1210579 GTCCAGGCGTAATAT TCGC TTCGGC GCGA TTTTTATGCGAGCCA TERM 1637 1210688 - 1210674 - G 80 -4.2 -5.08824 | TTTCCACCGAAAAAA TCACCG GAC CGCTGA AAGATTCGAGGAACT TERM 1638 1211419 - 1211433 + g 90 -5.6 -5.14563 | opp_overlap 1211384, overlap 1211384 1211383 GCGCAGAGCGTCGCG GGACAG CCG CTGGCC TTTTTTCATCACCAG TERM 1639 1211803 - 1211817 + g 75 -6.4 -4.58395 | GCCCGCTTTTGTCGG CAGCGT GTA ACGTTG TTTTTCAGGCATAAC STY1257 1212056 - 1213366 + | outer membrane-specific lipoprotein transporter subunit LolC lolD 1213359 - 1214060 + | lipoprotein transporter ATP-binding subunit STY1259 1214060 - 1215304 + | outer membrane-specific lipoprotein transporter subunit LolE TERM 1640 1216208 - 1216219 + G 78 -2.2 -5.1615 | gap 1, overlap 1216164 GGATGCAGGTGGGAT GC-GC GGT GCTGC TTTTTTACATCTTAC STY1260 1215333 - 1216241 + | N-acetyl-D-glucosamine kinase cobB 1216260 - 1217081 + | NAD-dependent deacetylase potD 1218209 - 1217163 - | spermidine/putrescine ABC transporter periplasmic substrate-binding protein TERM 1641 1218229 - 1218243 + r 72 -8.5 -3.75115 | opp_overlap 1218228, overlap 1218225 CGTCCCCTGAATTAC GGGCC TTATC GGCCC TTGGTTTTATCACGA potC 1219013 - 1218234 - | spermidine/putrescine ABC transporter membrane protein TERM 1642 1218770 - 1218747 - G 89 -13.9 -3.53012 | overlap 1218762 TGGCTTCCCGCGAAA GCGGTAGCG ATAAAG CGCTACCGC GGTTAACGAGCCAAT sifA 1220339 - 1219329 - | secreted effector protein TERM 1643 1219724 - 1219734 + g 70 -3.2 -4.77719 | GAATTTTCGCTGCCA GGTA GGT TGCC TTTTCTTGCGTTTTC potB 1221531 - 1220668 - | spermidine/putrescine ABC transporter membrane protein TERM 1644 1220716 - 1220704 - G 76 -10.5 -3.67597 | CTTCTTATTCAATAA GCGGG AAG CCCGC CAGTAAATCAACAGC potA 1222651 - 1221515 - | putrescine/spermidine ABC transporter ATPase protein TERM 1645 1222261 - 1222296 + g 78 -2.5 -5.17576 | gap 1, opp_overlap 1222254, overlap 1222258 GCACCATACGCAGCG CATCGGTCACGCGAGG CGCTA TCTCG-GCGGCTGGTG TTTTTTGCATTCGTA TERM 1646 1223089 - 1223067 - g 72 -4.1 -4.76892 | gap 1 ACATTAAGTGAAAAA GGGA-CGTTG ATGG CGACGCTCCC GGCCAATGTTGAGGG pepT 1222902 - 1224131 + | peptidase T TERM 1647 1224166 - 1224193 + G 100 -13.6 -4.87665 | TGAAGCGTTTTATTA TTTATGGCGGGA TATT TTCCGCCATAAA TTTTTCTGCCTGGAG TERM 1648 1224479 - 1224506 + G 70 -3.3 -4.79451 | overlap 1224469 TTATCCGGGCGATCG GGCCGATATGT TTGAAC ACCTGGCGGCC TTTTATGTTTACGGT TERM 1649 1224822 - 1224835 + G 76 -3.1 -5.00616 | gap 1 ACCTGGGATAATCGT GA-GCG CGT CGCCTC TTTTTTGCAGCAGAA TERM 1650 1225179 - 1225164 - g 90 -10.4 -4.34263 | opp_overlap 1225158 CTGGAAGAATATAAA CGTCGG CAGT CCGACG TATCCATGGTGTTGT STY1268 1224135 - 1225469 + | hypothetical protein STY1269 1226630 - 1225509 - | hypothetical protein phoQ 1228174 - 1226711 - | sensor protein PhoQ TERM 1651 1227031 - 1227041 + g 74 -6.8 -4.25104 | CGTTGCCCATTACTT CGAC AAA GTCG TTTTGCTCGCCGACA phoP 1228848 - 1228174 - | DNA-binding transcriptional regulator PhoP TERM 1652 1228964 - 1228934 - R 76 -9.1 -3.67724 | opp_overlap 1228958, overlap 1228932 1228935 1228958 TAAACCAGACAAATA GTCACCCTCTTTC TGAAG AAAAGAGGGTGAG GCACACATTATTTAA TERM 1653 1228963 - 1228935 - R 79 -12.6 -2.7955 | opp_overlap 1228958, overlap 1228934 1228932 1228958 AAACCAGACAAATAG TCACCCTCTTTC TGAAG AAAAGAGGGTGA GGCACACATTATTTA purB 1230342 - 1228972 - | adenylosuccinate lyase TERM 1654 1230015 - 1230033 + g 81 -3.8 -5.27335 | gap 1, overlap 1230015 1230016 CGGAAACGTCATGTA G-CGCCG GGATCG CGGCGGC TTTTTCTTTCAGAAA TERM 1655 1230285 - 1230267 - G 71 -4.4 -4.58395 | opp_overlap 1230267 1230268 1230271, overlap 1230268 CGTATTCGCTAAAAA TTCCGCGC AGC GCGCTGAC TTTATCGCCGTAGCG STY1273 1230993 - 1230346 - | hypothetical protein trmU 1232180 - 1231074 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase STY1275 1232695 - 1232234 - | putative mutT family protein TERM 1656 1232479 - 1232453 - G 74 -2.2 -5.12068 | opp_overlap 1232467 GATAGCGAATAAAAA GCGCAGGA ACGGGGTTTTA TCCGGCGC AATCCACTGATGCAT STY1276 1233036 - 1232707 - | putative secreted protein rluB 1233698 - 1233033 - | putative ribosomal large subunit pseudouridine synthase B TERM 1657 1233404 - 1233429 + g 72 -11.2 -3.14132 | gap 1 GTTTGCCCGGTTGCG TGA-GGCGCGC CTGCA GCGCGCCGTCA TTAGTCAGCACCAAA TERM 1658 1233646 - 1233658 + g 76 -2.7 -5.11613 | overlap 1233647 CGCTTAACGTAGTGA TTTCT AAA AGAAG TTTTTTGCATGGTGT TERM 1659 1234684 - 1234673 - g 71 -7.2 -3.965 | GCTGAAAATTAAGAA CCCG AACA CGGG TAAAGAGATCGTGGT icdA 1233870 - 1235120 + | isocitrate dehydrogenase TERM 1660 1235140 - 1235170 + F 79 -10.5 -3.58726 | opp_overlap 1235130 1235140 1235146, overlap 1235146 GATAATTGTTAAAAA CAAAAACGGGGGC TTAAC GTCCCCGTTTTTA TTGTCTATGGAAAAC TERM 1661 1235170 - 1235140 - f 93 -10.5 -4.63542 | opp_overlap 1235140 1235146, overlap 1235130 1235146 GATAATTGTTAAAAA CAAAAACGGGGGC TTAAC GTCCCCGTTTTTA TTGTCTATGGAAAAC TERM 1662 1235146 - 1235164 + F 100 -9.5 -5.27206 | opp_overlap 1235140 1235146, overlap 1235140 TGTTAAAAACAAAAA CGGGGGC TTAAC GTCCCCG TTTTTATTGTCTATG TERM 1663 1235164 - 1235146 - f 91 -7.3 -5.61881 | opp_overlap 1235146 1235140, overlap 1235140 TGTTAAAAACAAAAA CGGGGGC TTAAC GTCCCCG TTTTTATTGTCTATG TERM 1664 1235203 - 1235185 - f 100 -16 -4.18197 | opp_overlap 1235175 ATTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA 1235316 - 1235774 + | transposase for insertion sequence element IS200 TERM 1665 1235853 - 1235877 + T 93 -9.9 -4.62441 | opp_overlap 1235856, overlap 1235855 1235856 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTATATCAGG TERM 1666 1235855 - 1235875 + T 95 -12.5 -3.91983 | opp_overlap 1235856, overlap 1235853 1235856 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTATATCA TERM 1667 1235856 - 1235874 + T 93 -16 -2.94105 | opp_overlap 1235856, overlap 1235855 1235853 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATATC TERM 1668 1235874 - 1235856 - T 100 -16 -4.91109 | opp_overlap 1235856 1235855 1235853 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATATC chaA 1236988 - 1235888 - | calcium/sodium:proton antiporter TERM 1669 1236457 - 1236437 - G 81 -3.9 -5.1963 | overlap 1236439 TTGAATCAACAAAAA TACGCCG TACATCG CGGCGGA AATTAACGCGACCAA TERM 1670 1236455 - 1236439 - G 70 -6.5 -4.21997 | overlap 1236437 GAATCAACAAAAATA CGCCG TACATCG CGGCG GAAATTAACGCGACC TERM 1671 1236783 - 1236766 - G 70 -6.9 -4.18908 | overlap 1236748 1236745 ACAGGCTTAAAATAA GCGATCC GTAG GGTTCGC CGAGTCGGTGCGCTA chaB 1237255 - 1237485 + | cation transport regulator STY1283 1237918 - 1237565 - | hypothetical protein STY1284 1237990 - 1239519 + | hypothetical protein narL 1240170 - 1239520 - | transcriptional regulator NarL narX 1241959 - 1240163 - | nitrate/nitrite sensor protein NarX TERM 1672 1241367 - 1241322 - G 70 -9.7 -3.33492 | TTATTGAGCGCAGAA CCCAACGCGGCCATCTCATTG CGTC CACTGATATTGGCACGTTGGG TAAAGTCGCGCTGAC TERM 1673 1242800 - 1242784 - g 72 -2.1 -4.86731 | overlap 1242762 1242785 CTTTCCTAAACAAAA GCAGGGC GGC GCGCTGG GTCTGAACGGCGGTC TERM 1674 1243155 - 1243180 + G 70 -3.3 -4.69027 | gap 1, overlap 1243161 CTAAAACGCAATTCC CGGATG-TGCAG ATC CTGCATTATGCG TTTTTCGGTCCGTTT TERM 1675 1243538 - 1243552 + G 89 -2.7 -5.4505 | overlap 1243530 TTTATTTCCGCGATT GGCGC GATTG GCGGC TTTTTTATTCCGAAA narK 1242299 - 1243696 + | nitrite extrusion protein (nitrite facilitator) TERM 1676 1243713 - 1243731 + F 100 -8.8 -5.75342 | TTTTGATTATCCTTT GCGCGG CGTTAGA CCGCGC TTTTTTTTACCCGCA TERM 1677 1243938 - 1243921 - f 76 -4.1 -5.07523 | overlap 1243922 TATATATAAATAAAA CTCCTCC TCCA AAAGGAG TATGCCGGAGGTTTG TERM 1678 1244103 - 1244134 + G 74 -10.3 -3.57144 | gap 1, opp_overlap 1244126 GTAAATTCCTGGACC GGTTTCGCTACTTC AAGCA GAAG-GGCGAAACC TTTGCCGATGGGCAC TERM 1679 1244370 - 1244351 - g 73 -10.6 -3.33037 | opp_overlap 1244345, overlap 1244344 ATGCCAAACCATGAA CCTCGCGG CTGC CCGCGCGG GGCAAGTTACTCCTG TERM 1680 1245228 - 1245207 - g 84 -8.7 -4.27584 | ACCCGGAATGGAAAA CCGTCGCTA TCAA CAGCAACGG TGAAATGGTGGCGCC TERM 1681 1245844 - 1245833 - g 78 -5.8 -4.72272 | opp_overlap 1245840, overlap 1245835 GTCGGCCAGGAAAAA CTGC GTCC GCAG ACCGGCTGGCAGCCG TERM 1682 1246485 - 1246498 + G 74 -6.7 -4.25056 | opp_overlap 1246476 ACGATATGAATACCT CGGAT ATGC ATCCG TTTATTCATCCGCTG narG 1244084 - 1247827 + | respiratory nitrate reductase 1 alpha chain TERM 1683 1247921 - 1247907 - g 73 -5.6 -4.60041 | AGTCACCTGTAAAAA CGTCTG GAC CAGTCG CGAAGGTATGGAATA TERM 1684 1248208 - 1248180 - g 74 -9.6 -3.62354 | gap 1, opp_overlap 1248184, overlap 1248178 GCCGGAAAGCAAACA TCAGCCGATCGCG CGTC CGCGCTCG-CTGA TTACCGGCCAGCGGA narH 1247824 - 1249359 + | respiratory nitrate reductase 1 beta chain TERM 1685 1249472 - 1249488 + G 86 -10.1 -4.25848 | opp_overlap 1249472 1249467, overlap 1249473 CCTGGATAAAGAGGA TGCCCAG ACT CTGGGCG TTTTCCTGCGCGATT TERM 1686 1249473 - 1249487 + G 72 -11.4 -3.15027 | opp_overlap 1249472 1249467, overlap 1249472 CTGGATAAAGAGGAT GCCCAG ACT CTGGGC GTTTTCCTGCGCGAT narJ 1249356 - 1250066 + | respiratory nitrate reductase 1 delta chain narI 1250066 - 1250743 + | respiratory nitrate reductase 1 gamma chain TERM 1687 1250764 - 1250779 + F 100 -10.4 -5.65177 | opp_overlap 1250764 TCTCGATGCCCTAAA CTCCGC TTCG GCGGAG TTTTTTTATGGCTGT TERM 1688 1250779 - 1250764 - f 79 -10.4 -3.55444 | opp_overlap 1250764 TCTCGATGCCCTAAA CTCCGC TTCG GCGGAG TTTTTTTATGGCTGT TERM 1689 1251219 - 1251201 - g 71 -7.4 -3.96892 | overlap 1251204 AAGCCTGATTATAAA CTAGCCAT AAA ATGGCTGG AGAAAGCGGGTAAAC STY1292 1250985 - 1252514 + | putative secreted protein TERM 1690 1252666 - 1252682 + F 88 -12.3 -3.57797 | overlap 1252654 TTTCGCCCTTCGGGT CGTTGCC TGC GGCAACG TTCTCTCGCTTTCGC TERM 1691 1252847 - 1252865 + F 77 -8.8 -3.92373 | overlap 1252836 1252848 GCTTCGCCCTTCGGG TCGTTGCC TAC GGCAACGC TTTCTCGCTGCGCTC TERM 1692 1252848 - 1252864 + F 80 -12.3 -2.95102 | overlap 1252836 1252847 CTTCGCCCTTCGGGT CGTTGCC TAC GGCAACG CTTTCTCGCTGCGCT TERM 1693 1253029 - 1253045 + G 81 -12.3 -3.5518 | CCTCACCCTTCGGGC CGTTGCC TGC GGCAACG TTCTCTCACTATTGC STY1293 1252901 - 1253230 + | hypothetical protein purU 1254133 - 1253291 - | formyltetrahydrofolate deformylase TERM 1694 1254679 - 1254665 - H 82 -7.8 -4.66537 | opp_overlap 1254675 1254676, overlap 1254666 TCCCTGAATATAAAA CGGCGT TGA ACGCCA GGGTGGCATTATGTT TERM 1695 1254678 - 1254666 - H 70 -9.1 -3.3944 | opp_overlap 1254675 1254676, overlap 1254665 CCCTGAATATAAAAC GGCGT TGA ACGCC AGGGTGGCATTATGT STY1296 1254751 - 1255656 + | hypothetical protein TERM 1696 1256034 - 1256016 - g 71 -4.5 -4.66537 | overlap 1256018 TTCCGCAACAGAAAA TATGGCG GATAT CGCCAAA GCGTTACGCCTTGGG STY1297 1255747 - 1256760 + | response regulator of RpoS galU 1256963 - 1257871 + | UTP--glucose-1-phosphate uridylyltransferase subunit GalU TERM 1697 1257899 - 1257917 + T 100 -9.5 -5.64274 | opp_overlap 1257899 AATTTTTTAACAGAA GCGCTGG TAAAT CCGGCGC TTTTTTTATGCCTGG TERM 1698 1257980 - 1257964 - T 100 -13.7 -5.81412 | opp_overlap 1257964 CTCAGGCAAAAAAAA TCCCGCC AGC GGCGGGA TTTTAAGCATCCAGG TERM 1699 1257964 - 1257980 + T 100 -13.7 -4.11216 | opp_overlap 1257964 CTCAGGCAAAAAAAA TCCCGCC AGC GGCGGGA TTTTAAGCATCCAGG hns 1258416 - 1258003 - | global DNA-binding transcriptional dual regulator H-NS TERM 1700 1258080 - 1258094 + g 78 -7.1 -4.55128 | opp_overlap 1258067 CAGCCGGTGTACGAC CCTGG CCAGT CCAGG TTTTAGTTTCACCGT tdk 1259079 - 1259696 + | thymidine kinase TERM 1701 1259864 - 1259847 - T 100 -12.7 -6.09196 | opp_overlap 1259847 GGTAAAACAAAAAAA CGGCCTC AATT GAGGCCG TTATTGTCATGCTAA TERM 1702 1259847 - 1259864 + T 95 -12.7 -3.85864 | opp_overlap 1259847 GGTAAAACAAAAAAA CGGCCTC AATT GAGGCCG TTATTGTCATGCTAA TERM 1703 1259897 - 1259910 + T 83 -4.5 -5.43487 | opp_overlap 1259897 CAGATAACGAATTAA GCGGA TTTT TTCGC TTTTTTCTCTGCTTT adh 1262571 - 1259893 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 1704 1261689 - 1261705 + g 71 -4.3 -4.59773 | overlap 1261690 GCTGACCGACGATAG CGGCGTT CAG AGCGCCA TTTTTCAGAATAACG STY1303 1263048 - 1263695 + | hypothetical protein TERM 1705 1263717 - 1263739 + F 100 -16.2 -3.36492 | ACCTGTTGATTTACA GGCGGCGCCC TAA GGGGGCCGCC TTGTGACATTCCCAG TERM 1706 1264954 - 1264936 - g 74 -2.4 -5.00884 | gap 1, overlap 1264937 ATCGCCGGTAAAAAA CCCGCCA CCGATC TGG-GGG TAAAAGCGCTTGATG oppA 1264354 - 1266102 + | periplasmic oligopeptide-binding protein precursor TERM 1707 1266106 - 1266141 + F 82 -5.4 -5.14965 | opp_overlap 1266111 1266113, overlap 1266108 1266110 1266111 1266113 ATCAAACATTAATGG CAAGACATGGGACAAC TGCG GTTGTCCCATGGTGTC TTTTTTCATCGCACT TERM 1708 1266108 - 1266139 + F 76 -8 -4.20707 | opp_overlap 1266111 1266113, overlap 1266106 1266110 1266111 1266113 CAAACATTAATGGCA AGACATGGGACAAC TGCG GTTGTCCCATGGTG TCTTTTTTCATCGCA TERM 1709 1266110 - 1266137 + F 93 -12.8 -3.69447 | opp_overlap 1266111 1266113, overlap 1266108 1266106 1266111 1266113 AACATTAATGGCAAG ACATGGGACAAC TGCG GTTGTCCCATGG TGTCTTTTTTCATCG TERM 1710 1266111 - 1266136 + F 93 -16.3 -2.80583 | opp_overlap 1266111 1266113, overlap 1266110 1266108 1266106 1266113 ACATTAATGGCAAGA CATGGGACAAC TGCG GTTGTCCCATG GTGTCTTTTTTCATC TERM 1711 1266136 - 1266111 - f 93 -16.3 -3.10732 | opp_overlap 1266111 1266110 1266108 1266106 1266113, overlap 1266113 ACATTAATGGCAAGA CATGGGACAAC TGCG GTTGTCCCATG GTGTCTTTTTTCATC TERM 1712 1266113 - 1266134 + F 82 -13.1 -2.92912 | opp_overlap 1266111 1266113, overlap 1266111 1266110 1266108 1266106 ATTAATGGCAAGACA TGGGACAAC TGCG GTTGTCCCA TGGTGTCTTTTTTCA TERM 1713 1266134 - 1266113 - f 82 -13.1 -3.10879 | opp_overlap 1266113 1266111 1266110 1266108 1266106, overlap 1266111 ATTAATGGCAAGACA TGGGACAAC TGCG GTTGTCCCA TGGTGTCTTTTTTCA TERM 1714 1266490 - 1266534 + G 78 -2 -5.14965 | gap 2, opp_overlap 1266477, overlap 1266491 1266523 1266528 CACGGTCAACGATCT G-GTTGCCGCC-AGCTTCCCCG TTT CGGCGAAACTTGGCGCCGCCGC TTTTTTGCTGGCGGT oppB 1266224 - 1267144 + | oligopeptide transporter permease TERM 1715 1267191 - 1267179 - f 100 -9.1 -5.1963 | GTTAAGTAAGAAAAA CAGCG AGA CGCTG GAAAATTTCAGTGAA TERM 1716 1267487 - 1267504 + F 72 -10.5 -2.82623 | overlap 1267485 TGATGGTCGGGATTG CCGCCGC GCTG GTGGCGG TCATTGTCGGAACGC TERM 1717 1267840 - 1267854 + F 70 -10 -2.99459 | overlap 1267836 TAGTGTATGCATCGT TGCTGG TGC CCAGCA TGATTCTGTTTGAGT oppD 1268078 - 1269085 + | oligopeptide transporter ATP-binding component oppF 1269082 - 1270086 + | oligopeptide transport ATP-binding protein OppF TERM 1718 1270093 - 1270113 + F 95 -12.6 -4.21812 | opp_overlap 1270088 1270087 CCGTTATAATCGCAA GGGCTGAC AATTC GTCAGCCC TTCTTTTAGGTGAGG STY1310 1270134 - 1270970 + | membrane transporter STY1311 1271347 - 1271018 - | dsDNA-mimic protein cls 1272841 - 1271381 - | cardiolipin synthetase TERM 1719 1273185 - 1273166 - R 100 -15 -3.91897 | opp_overlap 1273155 1273152 1273179 TGTGTGAGCCAGAAA GGGCACCG TATG CGGTGCCC AACAGGCCATCCTTT STY1313 1273497 - 1273201 - | YciI-like protein tonB 1273721 - 1274449 + | transport protein TonB yciA 1274909 - 1274508 - | acyl-CoA thioester hydrolase TERM 1720 1274580 - 1274568 - G 70 -3.3 -4.68511 | GGCAACATAAATAAA CAGCG CCT CGGTG GCCTTGTAGCGCTGT ispZ 1275609 - 1275070 - | intracellular septation protein A TERM 1721 1275248 - 1275235 - G 85 -2.3 -5.4833 | GCACGCAATAAAAAA CAGCG CCCA CGCCA GGTTCAGCTTTGACC TERM 1722 1275531 - 1275498 - G 85 -11.1 -3.92869 | gap 1, opp_overlap 1275522, overlap 1275501 1275522 1275525 GCACCCAGCTATAAA TCAGCAC-GATTGCCG TTG CGACAATCAGTGCGGA GGTCGCCGCATAGAT TERM 1723 1275528 - 1275501 - G 72 -11.4 -3.02745 | gap 1, opp_overlap 1275522, overlap 1275498 1275522 1275525 CCCAGCTATAAATCA GCAC-GATTGCCG TTG CGACAATCAGTGC GGAGGTCGCCGCATA TERM 1724 1275635 - 1275664 + r 72 -10.8 -2.77344 | gap 1, opp_overlap 1275632, overlap 1275634 CATCATCAACGAGCG TCG-AATGCGCCG CGTAA CGGCGCATTGCGG ATTATTGGCGAATCA yciC 1276409 - 1275666 - | hypothetical protein STY1318 1276839 - 1276435 - | hypothetical protein TERM 1725 1276667 - 1276677 + g 74 -3.2 -4.90266 | opp_overlap 1276659 CCAATTAGCGCTTTA CAGT GCG GCTG TTTTTGGTTGGTACC TERM 1726 1277099 - 1277117 + H 74 -8.2 -3.86634 | opp_overlap 1277094 1277098 1277099 ATTATAAGAACAAAT GTGATCTG TGT TAGATCAC TTATTACTTCATTGT TERM 1727 1277615 - 1277599 - g 78 -5.8 -4.6902 | CGATAATGGTAAAAA GACCGG GCTGT CCGATC TGAGCTTTAAGGATT STY1319 1277177 - 1277815 + | outer membrane protein W TERM 1728 1277858 - 1277840 - T 100 -16 -5.14563 | GTTGTGACGAAAAAA GACCCCGC CAG GCGGGGTC AAAAAAGGACATGAC STY1320 1278775 - 1277897 - | hypothetical protein STY1321 1279301 - 1278795 - | hypothetical protein STY1322 1279878 - 1279375 - | hypothetical protein TERM 1729 1279451 - 1279463 + g 70 -5.5 -4.42464 | overlap 1279452 AAATCAGTTTGTTTT TCCTC GTC GAGGG TTTCTTTGAGCAGTT TERM 1730 1279926 - 1279902 - R 71 -7.2 -4.07568 | gap 1, opp_overlap 1279903 1279904, overlap 1279904 TTCTCCTGGGCAAAA TACTGCGAGCC AGAA GACTCGCAG-A TTGCTTGATAAAAGC TERM 1731 1279925 - 1279904 - R 88 -12.3 -3.63744 | opp_overlap 1279904 1279903, overlap 1279902 CTCCTGGGCAAAATA CTGCGAGCC AGAA GACTCGCAG ATTGCTTGATAAAAG STY1323 1280150 - 1279968 - | hypothetical protein TERM 1732 1280198 - 1280185 - R 70 -2.3 -5.00616 | overlap 1280186 TGCTTGCTGAAAAAA TCGGT TTTA ACCGT GTCGACACCCTATTA TERM 1733 1280303 - 1280313 + r 72 -2.6 -5.09259 | opp_overlap 1280303, overlap 1280298 ATGGTTTAGAGATAA TATA TTC TATA TTTTCTTTTAGAATA TERM 1734 1280621 - 1280599 - R 81 -12.7 -3.15579 | opp_overlap 1280591 1280599 CCAACCTCTCATTAA GCCGCCAGC GTTAT GCTGACGGC TTAACCCGTTATGCG trpA 1281436 - 1280630 - | tryptophan synthase subunit alpha trpB 1282629 - 1281436 - | tryptophan synthase subunit beta trpC 1283997 - 1282639 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 1735 1282699 - 1282677 - G 70 -9.8 -3.34236 | opp_overlap 1282698, overlap 1282679 AAACCGAGGCCAGAA GACGAGCATC TTT GATGCCCGGC TGTGACTCCACACCT TERM 1736 1282697 - 1282679 - G 74 -11 -3.23572 | overlap 1282677 ACCGAGGCCAGAAGA CGAGCATC TTT GATGCCCG GCTGTGACTCCACAC TERM 1737 1283610 - 1283597 - G 71 -8.1 -3.81287 | GAGAGCATCAGTAAA CAGGC ATCG GCCTG ATAGTAACGGGCAAG trpD 1285596 - 1284001 - | bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase TERM 1738 1284175 - 1284193 + g 71 -4.4 -4.63932 | opp_overlap 1284175 TTTACCTTGTAATAA CCGCGTCA GAA TGTCACGG TTTTCTTCCGGCGTG TERM 1739 1284474 - 1284491 + g 70 -2.7 -4.74706 | gap 1, overlap 1284462 1284477 TCAGCGGGCCGAGTA CGTTGAAC AGG GTTC-GCG TTTTTAACTGTTGGC trpE 1287158 - 1285596 - | anthranilate synthase component I TERM 1740 1286369 - 1286352 - G 70 -6.9 -4.1899 | GCAGGGCAGTGAAAA GCGGCGC GACG GCACCAC CTGAAATATCTCGCC TERM 1741 1287207 - 1287189 - H 100 -10.2 -5.75342 | TTTGTTCAAAAAAAA GCCCGCTT AAC AGGCGGGC CGGGTATCGTTTGGC TERM 1742 1287826 - 1287868 + G 74 -8.3 -3.9712 | gap 1, overlap 1287827 GGAAGGGGCATTGAG ACTGGCCAA-TGGCGGCGCG GTGA CGCGCGGCCACTTCGCCCGC TTTCTGGTGGAGTGC TERM 1743 1287827 - 1287867 + G 75 -11.8 -2.97951 | gap 1, overlap 1287826 GAAGGGGCATTGAGA CTGGCCAA-TGGCGGCGCG GTGA CGCGCGGCCACTTCGCCCG CTTTCTGGTGGAGTG trpH 1287419 - 1288300 + | hypothetical protein TERM 1744 1288522 - 1288562 + G 71 -8.4 -3.86202 | gap 1 TGATGTGCCGCGATT TGTCCGAGTTGTCGACCTA CTCC TACGTCGACAACGTGG-CA TTTCGTCTGATGAAA STY1330 1288308 - 1288928 + | hypothetical protein TERM 1745 1288979 - 1288962 - f 76 -8.3 -4.07885 | opp_overlap 1288958 1288962 1288963, overlap 1288949 1288963 TACGCGGCCTTAAAA TGGCGCG GCAA CGCGCCG TTCATTCTCCTGTTC TERM 1746 1288962 - 1288979 + F 79 -10.5 -3.49851 | opp_overlap 1288949 1288962 1288963, overlap 1288958 1288963 TACGCGGCCTTAAAA TGGCGCG GCAA CGCGCCG TTCATTCTCCTGTTC TERM 1747 1288978 - 1288963 - f 78 -11.8 -3.04517 | opp_overlap 1288963 1288962 1288958, overlap 1288949 1288962 ACGCGGCCTTAAAAT GGCGCG GCAA CGCGCC GTTCATTCTCCTGTT TERM 1748 1288963 - 1288978 + F 76 -11.8 -2.69188 | opp_overlap 1288949 1288962 1288963, overlap 1288962 1288958 ACGCGGCCTTAAAAT GGCGCG GCAA CGCGCC GTTCATTCTCCTGTT TERM 1749 1289147 - 1289132 - g 80 -9 -4.13767 | opp_overlap 1289129 1289132 GCGTTGACGGTAAAA TCGCCA CGCT TGGCGA TCGTGTTGAAGTCAC TERM 1750 1289717 - 1289695 - g 74 -10.4 -3.53091 | ATCCCGCTGCCGAAA GGCCTGCCGC GCG GCGGCTGGAC TGAGCTCGACTTCGC STY1331 1289029 - 1289904 + | 23S rRNA pseudouridylate synthase B TERM 1751 1289973 - 1289945 - T 70 -8.8 -3.3517 | opp_overlap 1289945 1289948, overlap 1289943 AGTCATCAGACAAGA GGGTTTGTGCCG GATGG CGGCGCAAACGC CTTAATCCGGCCTAC TERM 1752 1289945 - 1289974 + T 74 -10.8 -3.14931 | gap 1, opp_overlap 1289945 1289943, overlap 1289948 AGTCATCAGACAAGA GG-GTTTGTGCCG GATGG CGGCGCAAACGCC TTAATCCGGCCTACG btuR 1290581 - 1289991 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 1753 1290132 - 1290148 + g 73 -10.8 -3.3676 | CGTCTGGTGACCAGG GCGCGC GTTTA GCGCGC TTATGACCTCTTCCA STY1333 1291339 - 1290578 - | short chain dehydrogenase TERM 1754 1291178 - 1291195 + g 77 -7.7 -4.2772 | gap 1 CTCGTCAGCAATGTG CTGCG-CG ACC CGACGCAG TTTCTCTTCGTTGCG STY1334 1291577 - 1292623 + | putative periplasmic protease TERM 1755 1292632 - 1292660 + T 90 -16.1 -2.56596 | opp_overlap 1292626 1292625, overlap 1292627 GATGTAAACCGCTAT TGCCGGATGGC ATTCAGC GCCATCCGGCA TGGATTAATCAACCA STY1335 1292916 - 1292665 - | hypothetical protein TERM 1756 1292700 - 1292735 + g 74 -7.7 -4.11692 | gap 1, opp_overlap 1292699, overlap 1292695 TCTCAGACAGCACAT GCGCC-AGGTGTTTAA ACATG TTAAACACCGCGGTGC TTTTAGGGGTCGGTA TERM 1757 1294240 - 1294229 - g 71 -4.4 -4.63218 | opp_overlap 1294239 TTGGCGTGAAGAAAA CCAT GATG ATGG CGCAGCGTCTGTATG TERM 1758 1294901 - 1294883 - g 76 -3.1 -5.03314 | overlap 1294885 TCTATGCGGAAAAAA TGGGTGA AATCG TCACCGA CCGGCTGGAAGAAAA topA 1293319 - 1295916 + | DNA topoisomerase I TERM 1759 1295945 - 1295962 + F 100 -14.1 -5.37043 | opp_overlap 1295943 CCACTGTAGTCAAGC GGGCCGC GTAA GCGGCCC TTTTTTATATCCCCT cysB 1296327 - 1297301 + | transcriptional regulator CysB TERM 1760 1298131 - 1298106 - f 72 -9.1 -3.55622 | opp_overlap 1298106 TCTAATCTCGTCAAA GCCCGATAA TGCGTTAT TTATCGGGC TTTTTCATCTTCGTT TERM 1761 1298106 - 1298131 + F 93 -9.1 -4.90136 | opp_overlap 1298106 TCTAATCTCGTCAAA GCCCGATAA TGCGTTAT TTATCGGGC TTTTTCATCTTCGTT TERM 1762 1298533 - 1298547 + G 71 -10 -3.54543 | TGGCGGCCCGCCCGT GTCCTG ATG CAGGAC TTTACCGGCGTGCCT TERM 1763 1300171 - 1300208 + G 70 -5.6 -4.49958 | gap 1 TCGTCCGATACCTAC GGCTGGCAGTCGGAT TCAACCTAT ATCCGCCTGTC-GCC TTTCTTTGATGAAAT TERM 1764 1300239 - 1300223 - g 83 -12.3 -3.72576 | CTTTCTTTGATGAAA TGCAGGC CCA GCCTGCA CCCGTCAAAGATATC TERM 1765 1300572 - 1300562 - g 100 -8.2 -5.19212 | opp_overlap 1300561 ACCAGCAGGAAAAAA CGCC GCT GGCG GTAATTGCCGGGAAA acnA 1298278 - 1300953 + | aconitate hydratase ribA 1301599 - 1301009 - | GTP cyclohydrolase II pgpB 1301795 - 1302559 + | phosphatidylglycerophosphatase B STY1342 1302709 - 1303017 + | hypothetical protein TERM 1766 1303164 - 1303108 - g 76 -3.2 -5.09762 | gap 2 GCGCAACAAACAAAA CAGGATGAAGCTAACCGCCTGTCG CGCGATTATGT CG-CAGG-GGTTAACTTCCTGCTG AGTAACCAACAAGAT STY1343 1303024 - 1304193 + | hypothetical protein TERM 1767 1304735 - 1304700 - g 83 -12.6 -3.28712 | gap 1, opp_overlap 1304703, overlap 1304703 CTGGTGGGGCGAGAA TG-ATGGCCGCAGCGCG CGA CGCGCTGGCGCCATTCA GTAAAGATGCGCCGT TERM 1768 1304703 - 1304731 + G 91 -14.5 -3.06183 | opp_overlap 1304700 1304703 GTGGGGCGAGAATGA TGGCCGCAGCGCG CGA CGCGCTGGCGCCA TTCAGTAAAGATGCG TERM 1769 1304731 - 1304703 - g 83 -14.5 -2.82623 | opp_overlap 1304703, overlap 1304700 GTGGGGCGAGAATGA TGGCCGCAGCGCG CGA CGCGCTGGCGCCA TTCAGTAAAGATGCG pyrF 1304384 - 1305121 + | orotidine 5'-phosphate decarboxylase STY1345 1305121 - 1305447 + | translation initiation factor Sui1 TERM 1770 1305479 - 1305454 - T 86 -9 -4.4078 | GGCGGCTAATGAAAA CGCCACGG TTGTAAATTG CCGTGGCG TAAAAGTCAACTTTG osmB 1305785 - 1305567 - | lipoprotein STY1347 1306798 - 1306046 - | putative regulatory protein TERM 1771 1306432 - 1306471 + g 74 -2.3 -5.06414 | gap 2, overlap 1306447 GGGTTTCTTTGAGCA GATG-CGCGAT-ATAACTG CTCA CGGTGATGATCGTGACATC TTTTTGTTCCGCCAG TERM 1772 1306568 - 1306579 + g 74 -7.2 -4.18058 | CGAGGCGGCGAACTC CGCC AGTC GGCG TTTTAGCGTGTAGTT STY1349 1309168 - 1307186 - | RNase II stability modulator TERM 1773 1308013 - 1307998 - G 77 -3.9 -5.00616 | TTTCCGGCGAAAAAA CGCAG AACTGA CCGCG GCCGCCTTCTTTGGC TERM 1774 1308703 - 1308654 - G 90 -4.4 -5.42259 | opp_overlap 1308640 1308654 1308657, overlap 1308665 1308679 CCATTGCGAAAAAAA TTCTCAATGTAGT-GTCGGGAGGC AACC GCCTCCCGGCGACT-CATAAATAA TTTAAATACGCTTTG TERM 1775 1309410 - 1309384 - R 100 -14.5 -4.96427 | GAAGAAGAAAAGAAA CGGCCTTTGCC TTCTC AGCAAAGGCCG TTGAGCGAGCTAAGC rnb 1311364 - 1309430 - | exoribonuclease II TERM 1776 1311463 - 1311475 + r 72 -4.8 -4.60924 | ATGAGTTAATAGGTT TCGC CCAAC GCGA TTTTTAAACGATTTA TERM 1777 1311581 - 1311571 - R 70 -2.4 -5.03715 | AGTAGCGGGAAAAAA TGCG CGG CGCT AAAGCGATCGGGCGC STY1351 1312586 - 1311666 - | hypothetical protein fabI 1313574 - 1312786 - | enoyl-(acyl carrier protein) reductase STY1353 1314180 - 1315562 + | hypothetical protein STY1354 1316029 - 1316736 + | hypothetical protein sapF 1317558 - 1316752 - | peptide transport system ATP-binding protein SapF sapD 1318552 - 1317560 - | peptide transport system ATP-binding protein SapD sapC 1319442 - 1318552 - | peptide transport system permease protein SapC TERM 1778 1319161 - 1319137 - G 85 -11.3 -3.96624 | CAGCGTTACGATAAA CGCGCCGCCGA CCG TGGGCGCCGCG CCGCTTAACAGGCGG STY1358 1319577 - 1319921 + | integrase (fragment) STY1359 1320117 - 1319944 - | hypothetical protein STY1360 1320752 - 1320252 - | hypothetical protein TERM 1779 1320323 - 1320339 + g 70 -3 -4.71828 | overlap 1320324 ACGTACTTAATGTGA TCTCAT CTAGT ATGAGG TTTTCTTGCTGCCGT STY1361 1321082 - 1321351 + | hypothetical protein TERM 1780 1321437 - 1321416 - f 93 -9.4 -4.84914 | opp_overlap 1321416 AGTGACATAACAAAA CGGCTCCC TGTAGG GGAAGCCG TTATAGTGCCGCAGT TERM 1781 1321486 - 1321506 + F 70 -2.4 -5.00267 | overlap 1321488 1321494 AATTACCGGGATTTT CGTGCCCG TAAAC CGGGGAGG TTTGTTTTTCTAATT TERM 1782 1321494 - 1321510 + F 75 -3 -5.10601 | overlap 1321488 1321486 GGATTTTCGTGCCCG TAAACC GGGGA GGTTTG TTTTTCTAATTTTAT STY1364 1322110 - 1322535 + | putative periplasmic protein TERM 1783 1322826 - 1322845 + F 76 -4.9 -4.87626 | AACTCTCACCATAAA GGCTGCG CATTTA CGTGGCC TTTTTCGTATTCAGG STY1366 1322944 - 1323225 + | DNA-invertase (fragment) TERM 1784 1323401 - 1323364 - g 77 -7.2 -4.3277 | gap 1, overlap 1323355 GATAGAGAAGATAAA TCTCCGGCAAT-CAT CATCGAAGC ATGGACTGCCGGAGA AAATAGAAAACAATA STY1367 1323331 - 1323468 + | hypothetical protein sapB 1324465 - 1323500 - | peptide transport system permease protein SapB TERM 1785 1323993 - 1324003 + g 71 -8.2 -3.78329 | opp_overlap 1323993 TCAATGATGGCGAAA CCGG TAA CCGG TTTAACTTCATAAAG sapA 1326111 - 1324462 - | peptide transport periplasmic protein SapA precursor pspF 1327203 - 1326223 - | phage shock protein operon transcriptional activator TERM 1786 1326308 - 1326336 + g 83 -6.1 -4.87626 | gap 1, opp_overlap 1326323, overlap 1326307 TTCTGGTTAAATTTC GC-CTGCTGTAA GCTACG TTGCAGCAGCGC TTTTTCCTGTTGCAG TERM 1787 1326900 - 1326933 + g 71 -4.5 -4.56775 | gap 1, opp_overlap 1326892 1326895 1326894 1326923, overlap 1326927 CCAAAAACAGCGTGC CGCCATCG-GCGCGTT CAA AACGACCGGGATGGCG TTTTTGCGCCCCGGT TERM 1788 1327449 - 1327437 - g 89 -9.1 -4.56597 | GCGTTGTTGGAAAAA GCGGA AGA TCCGC AGAAGCTGGTGCGCC pspA 1327374 - 1328042 + | phage shock protein PspA pspB 1328102 - 1328326 + | phage shock protein B pspC 1328326 - 1328685 + | DNA-binding transcriptional activator PspC pspD 1328708 - 1328926 + | peripheral inner membrane phage-shock protein pspE 1329002 - 1329316 + | thiosulfate:cyanide sulfurtransferase (rhodanese) TERM 1789 1329324 - 1329314 - f 89 -4 -5.72207 | opp_overlap 1329314 CCGAAAGTAAAAAAA TAGA TAA TCTA TTGCTCAATACTCAT TERM 1790 1329348 - 1329364 + F 83 -10.8 -3.80018 | opp_overlap 1329345 TACTCATACTAACCG CGGCGC TTAAT GCGCCG TTGTTGATCTCTCCG TERM 1791 1329413 - 1329428 + F 71 -3.3 -4.84921 | TTTTGCACATATCTA TAACG CAGGCT CGTTA TTATTTTTTCTTCTC STY1376 1329465 - 1330862 + | putative ATP-binding protein STY1377 1330859 - 1331920 + | hypothetical protein tyrR 1332068 - 1333609 + | DNA-binding transcriptional regulator TyrR TERM 1792 1333643 - 1333619 - T 100 -9.9 -4.98911 | opp_overlap 1333622, overlap 1333621 1333622 GAGTAGAAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 1793 1333641 - 1333621 - T 95 -12.5 -4.09508 | opp_overlap 1333622, overlap 1333619 1333622 GTAGAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 1794 1333622 - 1333640 + T 100 -16 -4.91109 | opp_overlap 1333621 1333619 1333622 TAGAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 1795 1333640 - 1333622 - T 93 -16 -3.04078 | opp_overlap 1333622, overlap 1333621 1333619 TAGAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 1334180 - 1333722 - | transposase for insertion sequence element IS200 TERM 1796 1334293 - 1334311 + r 100 -16 -4.18018 | opp_overlap 1334283 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 1797 1334332 - 1334355 + r 81 -12.5 -3.28712 | opp_overlap 1334332, overlap 1334335 CATAGACAAAAAAAA GAAGGCCTC CGGATA GAGGCCTTC TTGTGACAAAAGAGC TERM 1798 1334355 - 1334332 - R 100 -13.2 -6.06529 | opp_overlap 1334332 1334335 CATAGACAAAAAAAA GAAGGCCTCC GGAT AGAGGCCTTC TTGTGACAAAAGAGC TERM 1799 1334335 - 1334352 + r 72 -8.4 -3.78934 | opp_overlap 1334332, overlap 1334332 AGACAAAAAAAAGAA GGCCTC CGGATA GAGGCC TTCTTGTGACAAAAG TERM 1800 1334398 - 1334413 + r 77 -10.4 -3.41878 | opp_overlap 1334372 1334396 1334370 1334369 1334392, overlap 1334396 ACTGACAAACGTAGC GCCAGC AGGC GCTGGC TTATGCCTTCAGGAC tpx 1334920 - 1334414 - | thiol peroxidase TERM 1801 1335358 - 1335387 + G 70 -2.8 -4.72272 | gap 3, opp_overlap 1335352 GGCAGCAAAGCCTTG CCGGGCTGCTCGGCG TGA CGCCGT-C--CCCGG TTTTTACTACCGCGC STY1382 1335036 - 1336001 + | putative mandelate racemase / muconate lactonizing enzyme family protein STY1383 1336704 - 1335976 - | murein peptide amidase A mppA 1336894 - 1338507 + | periplasmic murein peptide-binding protein MppA STY1385 1339533 - 1338604 - | putative oxidoreductase TERM 1802 1340244 - 1340263 + G 76 -2.7 -5.03314 | ACCTGAACCACCGCA CCGGGCG TACCAC CGACTGG TTTTTTACGCGTGAG STY1386 1339652 - 1340557 + | putative transcriptional regulator STY1388 1340834 - 1341703 + | putative oxidoreductase TERM 1803 1341743 - 1341779 + T 80 -12.4 -3.05963 | opp_overlap 1341738 1341748, overlap 1341746 CGCATGAACAGCTTC TAACACGGTTGCCG GAGCGTAGA CGGCAACCGTGTGA TATTCGCCTGGCCGT TERM 1804 1341746 - 1341776 + T 83 -14.1 -2.75074 | opp_overlap 1341738 1341748, overlap 1341743 ATGAACAGCTTCTAA CACGGTTGCCG GAGCGTAGA CGGCAACCGTG TGATATTCGCCTGGC TERM 1805 1341774 - 1341748 - T 75 -10.9 -3.04248 | opp_overlap 1341746 1341743, overlap 1341738 GAACAGCTTCTAACA CGGTTGCCG GAGCGTAGA CGGCAACCG TGTGATATTCGCCTG STY1389 1342507 - 1341794 - | oxidoreductase TERM 1806 1342039 - 1342057 + g 70 -8.8 -3.72893 | opp_overlap 1342021 1342020, overlap 1342040 1342042 GGGCCAGGCCGCGCG CCAGCCCT TGC AGGGCTGA TTTACTGGCAGCGTA TERM 1807 1342040 - 1342056 + g 72 -12.3 -2.83522 | opp_overlap 1342021 1342020, overlap 1342039 1342042 GGCCAGGCCGCGCGC CAGCCCT TGC AGGGCTG ATTTACTGGCAGCGT STY1390 1342585 - 1343175 + | putative transcriptional regulator TERM 1808 1343207 - 1343193 - f 73 -2.1 -5.15634 | overlap 1343194 CAGCGCATCAAAAAA CCTGA GCCAG TCAGA TACGGACAAACAGGG STY1391 1343304 - 1343540 + | putative lipoprotein STY1392 1345052 - 1343754 - | hypothetical protein TERM 1809 1344057 - 1344083 + g 73 -5.3 -4.63107 | gap 1, overlap 1344055 ATTTTGCGAAAAGGT GTTAAGC-ACTG CCTT CAGTCGTTTAAC TTTTGCTTCTTTACT TERM 1810 1344444 - 1344432 - G 84 -6.3 -5.02074 | opp_overlap 1344431 1344432 CGAGCGGGTAAAAAA GAGAT TGA ATCTC ACTTTGTTCTGCAAT TERM 1811 1344787 - 1344766 - G 72 -2.3 -4.84527 | gap 1, opp_overlap 1344766 1344769, overlap 1344769 GCGATATACGAAAAA CAA-GCTACC ATT GCTAGCGTTG TGTTTCTGATGGTTG TERM 1812 1345104 - 1345117 + r 76 -2.3 -5.36018 | AATCTGTCCCCGGTG TCGCG TGCA CGCAA TTTATTTTTTTTAAT STY1393 1346105 - 1345254 - | putative transcriptional regulator TERM 1813 1345467 - 1345483 + g 72 -3.7 -4.7497 | TTTACCACATTTTAT TACCC TCGACAT GGGTA TTTTTCCTCCATCGA STY1394 1346408 - 1347253 + | putative lipoprotein TERM 1814 1347308 - 1347288 - f 73 -11.1 -2.64322 | overlap 1347287 1347285 ATCTTATTTAAATAC TCCCTCTGC CAG GCAGGGGGA TATAGCAGGAGACAA STY1395 1347328 - 1349310 + | invasin-like protein STY1396 1349331 - 1350164 + | hypothetical protein STY1397 1350263 - 1350820 + | putative thiol peroxidase STY1398 1351264 - 1350926 - | hypothetical protein STY1399 1351978 - 1351292 - | hypothetical protein TERM 1815 1351838 - 1351850 + g 70 -9.1 -3.64488 | opp_overlap 1351837, overlap 1351836 TTGTCCGTTAATTAC GGCCT GAC AGGCC TCTTTTAACGCGATT TERM 1816 1352047 - 1352034 - g 79 -3.1 -5.2189 | overlap 1352023 CCAATGACCAAAAAA GTCAA CTTA TCGAC CACGGCGGGCGCCGA TERM 1817 1352247 - 1352257 + G 75 -6.8 -4.38712 | overlap 1352228 GCGGCAATGGGAGTG TCCG TGG CGGA TTTTGTCAACGTCGC STY1400 1352022 - 1352624 + | DNA-binding protein TERM 1818 1352666 - 1352707 + T 100 -13.1 -5.18371 | gap 1, opp_overlap 1352669, overlap 1352671 1352672 CGTCATCCGGACAGG GAAGCCTCGGTGCCCGATAA GCG TTATCGGGCACCG-GCTATC TTTTATTTTATCGCA TERM 1819 1352703 - 1352669 - T 90 -14.5 -3.12668 | gap 2, opp_overlap 1352666 1352671 1352672 CATCCGGACAGGGAA GCCTCGGTGCCCGATAA GCG TTATCGGGCACC--GGC TATCTTTTATTTTAT TERM 1820 1352671 - 1352703 + T 100 -17.1 -3.67607 | opp_overlap 1352669, overlap 1352666 1352672 TCCGGACAGGGAAGC CTCGGTGCCCGATAA GCG TTATCGGGCACCGGC TATCTTTTATTTTAT TERM 1821 1352672 - 1352702 + T 100 -20.6 -2.78124 | opp_overlap 1352669, overlap 1352671 1352666 CCGGACAGGGAAGCC TCGGTGCCCGATAA GCG TTATCGGGCACCGG CTATCTTTTATTTTA STY1401 1353741 - 1352710 - | hypothetical protein STY1402 1353980 - 1354234 + | hypothetical protein STY1403 1355236 - 1354289 - | universal stress protein UspE fnr 1356139 - 1355387 - | fumarate/nitrate reduction transcriptional regulator TERM 1822 1355423 - 1355435 + g 80 -9.1 -4.21908 | overlap 1355412 1355433 ACCGGCGAGGGCCGC CAGCG CAT CGCTG TTTTCAATAGTAATA TERM 1823 1355677 - 1355663 - G 71 -8.6 -3.78934 | overlap 1355666 TTTCTTCGACAATAA CAGGAT CAT ATCCTG ATCGCCTTTAATTTC TERM 1824 1355974 - 1355990 + g 78 -6.5 -4.62783 | CTTTAAACAGAGTTT GCCCTTT CTG AATGGGC TTTTTGCGCTCGATG ogt 1356850 - 1356335 - | O-6-alkylguanine-DNA:cysteine-protein methyltransferase STY1406 1357108 - 1357671 + | hypothetical protein STY1408 1358082 - 1359236 + | putative chemo-receptor protein TERM 1825 1359254 - 1359272 + F 88 -7.4 -5.03145 | overlap 1359218 ATACATGTTTGGTAA GCGCCT GTTGCTA AGGCGC TTTTTTCGCACGTTC zntB 1359382 - 1360365 + | zinc transporter TERM 1826 1360467 - 1360498 + T 74 -10.2 -3.29056 | overlap 1360470 ATCTCTCTCGCAGGT GAATGCAACGTCAA GCGA TGGGCGTTGCGTTC TATATTGTCTTGCTT TERM 1827 1360555 - 1360574 + T 100 -7.1 -5.83822 | ATTGATTCGTACGAC GCCGGCT TAGATT AGTCGGC TTTTTTTTGCCTGTA TERM 1828 1360888 - 1360917 + T 93 -15.1 -3.08813 | AATGTTTTGCCCGCC GCCCAGCTCAATA ACCT TACTGAGCTGGGC TATCTTGAGATGACG TERM 1829 1360951 - 1360973 + T 78 -12.8 -2.65815 | GTCCAGGCCGCAGCA TTACCCGTCA TTC TGGCGGGTAA TGATGTGCGTGTGCA TERM 1830 1362129 - 1362105 - T 83 -10.1 -4.13014 | opp_overlap 1362109, overlap 1362109 CGGATATTGGCAAAA TTAACGTGCAT CCC ATGCACGTTTA CGTCGCCGTACGTCA TERM 1831 1362125 - 1362109 - T 86 -10.9 -3.67622 | opp_overlap 1362109, overlap 1362105 TATTGGCAAAATTAA CGTGCAT CCC ATGCACG TTTACGTCGCCGTAC TERM 1832 1362109 - 1362125 + T 82 -10.9 -3.65351 | opp_overlap 1362109 1362105 TATTGGCAAAATTAA CGTGCAT CCC ATGCACG TTTACGTCGCCGTAC TERM 1833 1362231 - 1362268 + T 70 -9.9 -3.00106 | gap 1, opp_overlap 1362236, overlap 1362230 TATTAAAATGATCGA TAGTATGGCGTCTCAGCG GAG TGCTGAGACGCC-TGCAG ATTATTTCACTTCGA TERM 1834 1362264 - 1362236 - T 86 -14.6 -2.66008 | opp_overlap 1362231 1362230 AAATGATCGATAGTA TGGCGTCTCAGC GGAGT GCTGAGACGCCT GCAGATTATTTCACT STY1412 1363205 - 1362270 - | C32 tRNA thiolase TERM 1835 1364152 - 1364167 + G 95 -6.2 -5.29445 | opp_overlap 1364152 TTATATGTGAAGAAA TCCAAT CAAC ATTGGA TTTTTATTATTCAAA TERM 1836 1365108 - 1365122 + G 70 -5 -4.37886 | ATAACATTTTACCGA TCTTCT GAT GGAAGA TTTTATCAGGCGTCA STY1413 1363893 - 1365452 + | hypothetical protein STY1415 1365999 - 1366337 + | putative multidrug transporter STY1416 1366824 - 1366390 - | hypothetical protein TERM 1837 1367270 - 1367251 - H 93 -13.6 -3.50047 | opp_overlap 1367251, overlap 1367244 CGTATAAATTGACAA GCCCGAAC GGAT GTTCGGGC TTTTTTTGTCTATGG TERM 1838 1367251 - 1367270 + H 100 -13.6 -5.76633 | opp_overlap 1367251 1367244 CGTATAAATTGACAA GCCCGAAC GGAT GTTCGGGC TTTTTTTGTCTATGG TERM 1839 1367308 - 1367290 - H 100 -16 -4.18018 | opp_overlap 1367280 TTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA 1367421 - 1367879 + | transposase for insertion sequence element IS200 TERM 1840 1367958 - 1367982 + T 93 -9.9 -4.56978 | opp_overlap 1367961, overlap 1367960 1367961 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTATTTCCAGG TERM 1841 1367960 - 1367980 + T 95 -12.5 -3.89033 | opp_overlap 1367961, overlap 1367958 1367961 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTATTTCCA TERM 1842 1367961 - 1367979 + T 93 -16 -2.92335 | opp_overlap 1367961, overlap 1367960 1367958 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATTTCC TERM 1843 1367979 - 1367961 - T 100 -16 -4.91109 | opp_overlap 1367961 1367960 1367958 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATTTCC STY1419 1371541 - 1368017 - | pyruvate-flavodoxin oxidoreductase TERM 1844 1370544 - 1370558 + g 75 -11.4 -3.4582 | opp_overlap 1370537, overlap 1370543 AGATAAAGCGGCTCG GCCTGG GCG CCAGGC TCTTTGGTGCGATCC STY1420 1371928 - 1372083 + | hypothetical protein hslJ 1372537 - 1372127 - | heat-inducible protein TERM 1845 1372640 - 1372619 - R 70 -10.1 -3.08046 | overlap 1372618 GGGTTATCCGAAAAT GCTCCTCTG AGCG CAGGGGAGC GACAGGATTAGAACA ldhA 1373637 - 1372648 - | D-lactate dehydrogenase TERM 1846 1373414 - 1373439 + g 74 -2.4 -5.09173 | opp_overlap 1373418, overlap 1373411 TTAAATCCGGCGCAA CGCAGCGCGA TGTATT TCACGCCGTG TTTTTTCAGCTCTTC TERM 1847 1373511 - 1373525 + g 70 -5.6 -4.4715 | overlap 1373512 CTGCTTCACATCCAT TGGCGG TTT TCGCCG TTTTCTCGGTTAGCA TERM 1848 1375060 - 1375092 + G 74 -11.4 -3.2327 | opp_overlap 1375081 ATGAAATTCGTTGGC CGCTGGCG-GGCGTTA AGG TAACGCCGCGC-GGCG TTGATGGTCGATTAC TERM 1849 1375804 - 1375792 - g 72 -4.1 -4.77165 | overlap 1375787 TGCCGGATAACAAAA TCAAC GGC GTCGA TTTCATTCTGCCATT TERM 1850 1376439 - 1376449 + G 70 -6.8 -4.0896 | overlap 1376429 1376433 GTGTTTACGCTGTGG CGCA GTT TGCG TTTTGGCGACAATTT TERM 1851 1376500 - 1376486 - g 71 -4.2 -4.63486 | overlap 1376488 ATGGCTTGAACAAAA TACAGC GTT GCCGCA ACCTCCTTGCCGGAA STY1423 1373904 - 1376540 + | hypothetical protein STY1424 1376540 - 1376731 + | putative lipoprotein TERM 1852 1376757 - 1376747 - g 75 -4 -4.93365 | GGCCATAATGAAAAA GTAT TTA ATAC TATGGGTGCTGACGC STY1425 1376739 - 1377062 + | putative secreted protein TERM 1853 1377495 - 1377518 + G 71 -4.6 -4.55798 | gap 1 ATATGGGGTCAATGT GGCG-TGCATT GAA AATGTGTCGCC TTTTGATTTCGCCTG TERM 1854 1377644 - 1377619 - g 72 -11.9 -2.84234 | overlap 1377615 1377618 1377622 TACGAACCTAAGAAG TCACCTCCCGT CGAA ACGGGAGGCAA AAATATTTAAGCGGC TERM 1855 1377641 - 1377622 - g 78 -13.6 -2.67316 | overlap 1377615 1377619 1377618 GAACCTAAGAAGTCA CCTCCCGT CGAA ACGGGAGG CAAAAATATTTAAGC STY1426 1377205 - 1377654 + | hypothetical protein acpD 1378256 - 1377651 - | azoreductase TERM 1856 1378203 - 1378186 - G 75 -6.3 -4.63932 | overlap 1378188 CATTGTTCAATAAAA TAGTCAG TCAA CTGACCA GACTGAGAGTACCCT hrpA 1378514 - 1382359 + | ATP-dependent RNA helicase HrpA STY1429 1382423 - 1383223 + | hypothetical protein TERM 1857 1383254 - 1383227 - f 78 -6.2 -4.62069 | overlap 1383229 GCTTTACGCTAAAAA TCGCCCGTTTGC GAGG GTGAACGGGCAA GTGCGACCACCATTT TERM 1858 1383424 - 1383446 + F 79 -11.3 -3.30619 | overlap 1383413 TACGCCGCGATGGAG CTACGCGGT TTTGC GCCGCGTAG TTATCGGCCCTAGTT STY1431 1383466 - 1383870 + | putative cytochrome TERM 1859 1383995 - 1383962 - T 78 -6.7 -4.61199 | ATTCCATACAGAAAA CGCCTGCGTCT AACCAGGACCCG TGACGCAGGCG AAGGAGGACGGGTCT STY1433 1384578 - 1384141 - | hypothetical protein TERM 1860 1384186 - 1384171 - G 70 -6.8 -4.09243 | opp_overlap 1384171 1384169, overlap 1384173 CATAGTGGCGGAAAA TAGCGC AACG GCGCCA TGTTGCTCCAAAGTC STY1434 1386817 - 1385267 - | hypothetical protein TERM 1861 1386383 - 1386396 + g 71 -5.9 -4.23615 | opp_overlap 1386383 TAGCATTCCCATTAA CGCGT ACAT GCGCG TTTCTTGACTGTAAT STY1435 1387634 - 1386954 - | putative amino acid ABC transporter STY1436 1388362 - 1387631 - | ABC transporter ATP-binding subunit STY1437 1389034 - 1388387 - | putative ABC amino acid transporter permease STY1438 1389802 - 1389041 - | putative periplasmic amino acid-binding protein TERM 1862 1389244 - 1389223 - G 74 -7.3 -4.10672 | TGAAGGTAAAGTAAA CCGGCTCTT CTAT AAAAGCCAG ATCAAGATTACCATT STY1439 1390720 - 1391064 + | hypothetical protein sseJ 1391325 - 1391185 - | secreted effector J TERM 1863 1391528 - 1391542 + H 72 -5 -4.66163 | opp_overlap 1391526, overlap 1391527 GGGCGGCGGAAATCT TATCGC AGC GTGATA TTTTTACATCGCGCT TERM 1864 1393193 - 1393183 - g 81 -2.4 -5.40072 | opp_overlap 1393186 GTGGCGCTAAAAAAA GGCG TTG CGCT GGCGGAACATCTTGG TERM 1865 1393468 - 1393451 - g 78 -2.5 -5.22039 | opp_overlap 1393451 1393453, overlap 1393452 1393453 GTCAAATTCAAAAAA TGCGCCG TGAG CGGCGTG TTGGCTTGGGGTTAA STY1441 1392475 - 1393983 + | putative esterase TERM 1866 1394315 - 1394333 + G 72 -3.8 -4.70319 | CGGAATCCGATATTG CGGATGGT AAA ATTGTCCG TTTTGATTTTGCTGG mdoD 1394233 - 1395858 + | glucan biosynthesis protein D STY1443 1396054 - 1396629 + | hypothetical protein STY1444 1396641 - 1397843 + | putative glycolate oxidase aac 1398335 - 1397817 - | aminoglycoside 6'-N-acetyltransferase TERM 1867 1397882 - 1397854 - G 71 -10.3 -3.25877 | opp_overlap 1397858, overlap 1397852 1397856 1397858 AGTAATACAGTAATA TAGAGGTCGGGTA TTA TACCCGACCTTTT CCTGTGTGATTTTCC TERM 1868 1397880 - 1397856 - G 83 -12.9 -3.186 | opp_overlap 1397858, overlap 1397854 1397852 1397858 TAATACAGTAATATA GAGGTCGGGTA TTA TACCCGACCTT TTCCTGTGTGATTTT TERM 1869 1397878 - 1397858 - G 93 -15.5 -3.14309 | opp_overlap 1397858, overlap 1397856 1397854 1397852 ATACAGTAATATAGA GGTCGGGTA TTA TACCCGACC TTTTCCTGTGTGATT TERM 1870 1397858 - 1397878 + g 100 -15.5 -4.4084 | opp_overlap 1397858 1397856 1397854 1397852 ATACAGTAATATAGA GGTCGGGTA TTA TACCCGACC TTTTCCTGTGTGATT STY1446 1399126 - 1398335 - | putative regulatory protein TERM 1871 1398749 - 1398763 + g 83 -7.2 -4.55798 | GTTAGCGATTTTGAT GTCATT GCA AATGAC TTTTACTTTGGCGTC STY1447 1399774 - 1399142 - | ribulose-phosphate 3-epimerase STY1448 1400223 - 1399786 - | putative phosphotransferase enzyme TERM 1872 1400326 - 1400352 + r 100 -11.6 -4.78237 | overlap 1400327 GTTATCGCTCTCTGC AGGGGATAAGCG TTT TGCTTATCCCCA TTTTATTGTCGGATA TERM 1873 1400327 - 1400351 + r 100 -15.1 -3.46219 | overlap 1400326 TTATCGCTCTCTGCA GGGGATAAGCG TTT TGCTTATCCCC ATTTTATTGTCGGAT STY1449 1401161 - 1400355 - | hypothetical protein TERM 1874 1400415 - 1400432 + g 80 -4.7 -5.03715 | opp_overlap 1400415, overlap 1400417 1400418 CGCCTGGTCGACAAA GTTGGCG AAGA CGCCGTC TTTTTTAAACGTGGT STY1450 1402488 - 1401175 - | putative phosphotransferase enzyme STY1451 1402780 - 1402499 - | putative phosphotransferase enzyme TERM 1875 1402696 - 1402714 + g 74 -3 -4.86001 | overlap 1402698 CCGCAATGCCTTGCT CCGCAAGA AAG TCCTGCAG TTTTTGTGCAATCAT STY1452 1403895 - 1402777 - | hypothetical protein TERM 1876 1403245 - 1403232 - G 77 -8.1 -4.08216 | GCACGCGTCGTAAAA CGGGA ACAA TCCCG CGAATATTGAACTCT rimL 1404112 - 1404651 + | ribosomal-protein-L7/L12-serine acetyltransferase STY1454 1405628 - 1404648 - | putative transferase TERM 1877 1405497 - 1405511 + g 79 -11.4 -3.63895 | opp_overlap 1405490 GGCATCAACCCAGCC GCCGGA GGT TCCGGC TTTAACATCGTTAAA TERM 1878 1405747 - 1405736 - g 80 -4.4 -5.06223 | overlap 1405726 1405746 ATAAATTAAACAAAA TGTG TAAT CACA AGCAGAGCGATCGCG TERM 1879 1406511 - 1406522 + G 72 -2.2 -4.86621 | ACAACCGTTTAATGC TTCC TTCT GGAG TTTTTCGTTCGGCGT tehA 1405735 - 1406748 + | potassium-tellurite ethidium and proflavin transporter tehB 1406735 - 1407331 + | tellurite resistance protein TehB TERM 1880 1407354 - 1407367 + F 86 -4.5 -5.60993 | AAGTTCTGTAAGTCT TGCTG CGTT CGGCA TTTTTTTGTCGGGCG TERM 1881 1407537 - 1407576 + G 87 -13.6 -3.30629 | overlap 1407534 1407538 TACTGGCTTGCTGGC GTTATCCGGCTGTGCGTC TAAA GTCACACAGCCGGATAAG TATTCTGGATTCTTA TERM 1882 1407538 - 1407575 + G 90 -17.1 -2.57654 | overlap 1407537 1407534 ACTGGCTTGCTGGCG TTATCCGGCTGTGCGTC TAAA GTCACACAGCCGGATAA GTATTCTGGATTCTT STY1457 1407487 - 1408155 + | putative lipoprotein STY1458 1409447 - 1408209 - | putative benzoate membrane transport protein TERM 1883 1408512 - 1408502 - G 100 -8.2 -5.72053 | opp_overlap 1408503, overlap 1408503 CAAGTAAATAAAAAA CGCC TGC GGCG GCGGCCGCTAACCAG TERM 1884 1408615 - 1408604 - G 79 -7.2 -4.42974 | TGCAGATAGAATAAA CGCC AAAC GGCG AAAGCAGCAGCGCCA TERM 1885 1408697 - 1408707 + g 77 -8.2 -4.14243 | CCTTCATTGTGGCGA CGCC GGG GGCG TTTTGCGATGCCATC STY1459 1409479 - 1410015 + | putative DNA-binding protein TERM 1886 1410153 - 1410163 + G 70 -6.8 -4.18018 | TGACGCCGCAATTGC TCGC GAA GCGA TTTTGCATGGCGCAG TERM 1887 1410914 - 1410939 + G 100 -6.2 -5.4833 | gap 1 GTGGCGATCTGGCGC GTGCATCGGTT GGTCG GACCGA-GCAC TTTTTTGTTCCCTCC STY1460 1410094 - 1412058 + | putative peptidase STY1461 1412289 - 1412059 - | hypothetical protein sifB 1413513 - 1412563 - | secreted effector protein TERM 1888 1413603 - 1413618 + H 76 -4 -5.05505 | gap 1, overlap 1413605 CCATCGGTTTGCCTA TC-GGTG AAA CACCTGA TTTTTGCTTTGTCCT ugtL 1414042 - 1414440 + | hypothetical protein STY1464 1414473 - 1414703 + | hypothetical protein TERM 1889 1415340 - 1415328 - g 77 -4.1 -5.05577 | AAACCAAATGAAAAA CGAAT TTT ATCCG CAGGTAGAGAAAAAT pcgL 1414966 - 1415736 + | D-alanyl-D-alanine dipeptidase STY1466 1415872 - 1417296 + | putative regulatory protein STY1467 1417432 - 1418856 + | gamma-aminobutyraldehyde dehydrogenase TERM 1890 1418939 - 1418891 - T 100 -8.8 -5.08011 | gap 1, overlap 1418893 1418894 AAAATCGTGAAAAAA TA-GGCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCAGCA AGTACTCAAAGGTTG TERM 1891 1418936 - 1418893 - T 100 -15.2 -4.15235 | overlap 1418891 1418894 AATCGTGAAAAAATA GGCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCA GCAAGTACTCAAAGG TERM 1892 1418935 - 1418894 - T 100 -18.7 -3.08056 | overlap 1418893 1418891 ATCGTGAAAAAATAG GCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGC AGCAAGTACTCAAAG TERM 1893 1419220 - 1419208 - T 81 -3.3 -5.27335 | TGTGTCAAATAAAAA GAGCA TAT TGCGC GCGTTTTTTCCTCTG TERM 1894 1419295 - 1419323 + T 72 -5.2 -4.57073 | overlap 1419296 1419299 TTCGCTTTTCTGACC TCAAGCCCGATA CAGGT TACCGGGCATGG TTTTTCCGCCAGGTC srfC 1421484 - 1419337 - | putative virulence effector protein TERM 1895 1420611 - 1420587 - G 73 -9.2 -3.82098 | opp_overlap 1420587 GAGAATCAAGCGAAA GGCTGACCGC ATTGA GCAGTCGGCC TTCCTTAACCGGATG TERM 1896 1420739 - 1420751 + g 86 -10.5 -4.16284 | GGCGCCGCCAGTTCC CCGGC ATG GCCGG TTTGTTGCAACATAT srfB 1424462 - 1421481 - | putative virulence effector protein TERM 1897 1421680 - 1421695 + g 70 -6.8 -4.11484 | CGGACATTCAGTACG CCGTCG CCAG CGATGG TTTTCGCCAGTTCGG TERM 1898 1423923 - 1423905 - G 74 -6.6 -4.23213 | GGCATACTGAAGAAA CGACTCGC GCA GCCAGCCG TCAATCCATGTCTGG srfA 1425666 - 1424467 - | putative virulence effector protein TERM 1899 1425051 - 1425041 - G 78 -2.4 -5.252 | overlap 1425043 GATGGCCAGAAAAAA GGCG TGG CGAC GGCGGCGATAACCAC TERM 1900 1425245 - 1425259 + g 73 -5.6 -4.64676 | opp_overlap 1425241 1425242 GCCTGACTAAACGCC GCCTCT ACC AGCGGC TTTTCTTCGGGCTGC STY1473 1426016 - 1426249 + | hypothetical protein TERM 1901 1426288 - 1426260 - T 72 -6.6 -4.30978 | overlap 1426261 TGTAACCCATTAAAA CTGGCGCTTCGC AATCA GCCATGCGCCAA TGACCAGCAACAGCG STY1474 1426703 - 1426254 - | hypothetical protein TERM 1902 1426483 - 1426461 - G 100 -6.3 -5.56264 | gap 1, overlap 1426464 GGCAAATACAAAAAA TGA-CCCCAG CAAA CCGGGGATCA ATGTCCACCAGCGCA STY1475 1427218 - 1426703 - | putative acetyltransferase TERM 1903 1426911 - 1426921 + g 70 -6.8 -4.08216 | GCTTCGTCGATCAGT CTGC TGA GCAG TTTTCGCCCCAGTCC TERM 1904 1427623 - 1427646 + G 71 -9.5 -3.51329 | ATGAACCCTCTTATG CGCCGCCAG TTGAAC CTGGCTGCG TTATGGTTGGCGGTA STY1476 1427430 - 1428467 + | putative NADP-dependent oxidoreductase TERM 1905 1428494 - 1428476 - f 100 -8.8 -5.63517 | TGCGTAAAGAAAAAA TGGCGGCA TTA TGTCGCCA TAAAAATGTGCAAAT TERM 1906 1429434 - 1429418 - g 71 -9.5 -3.48924 | CCACTGCCTACAGAA CGTTTTG CAA CAAAACG TAGCGACGATTAAAA STY1477 1428801 - 1429466 + | putative DNA-binding transcriptional regulator TERM 1907 1429514 - 1429488 - T 100 -15.2 -3.26473 | opp_overlap 1429484 1429481 1429494, overlap 1429489 1429492 TGAAACTATGACTAA TCAATAGCGGGG ATG CCCCGCTATTGC CGGATATTTATTCAA TERM 1908 1429513 - 1429489 - T 100 -18.7 -2.55402 | opp_overlap 1429484 1429481 1429494, overlap 1429488 1429492 GAAACTATGACTAAT CAATAGCGGGG ATG CCCCGCTATTG CCGGATATTTATTCA TERM 1909 1429510 - 1429492 - T 93 -14.6 -3.41961 | opp_overlap 1429484 1429481 1429494, overlap 1429489 1429488 ACTATGACTAATCAA TAGCGGGG ATG CCCCGCTA TTGCCGGATATTTAT TERM 1910 1429494 - 1429508 + T 80 -12.8 -3.04515 | opp_overlap 1429492 1429489 1429488, overlap 1429484 1429481 TATGACTAATCAATA GCGGGG ATG CCCCGC TATTGCCGGATATTT STY1478 1431642 - 1429522 - | TonB-dependent receptor YncD precursor TERM 1911 1429975 - 1429991 + g 74 -7.2 -4.10855 | overlap 1429976 1429984 1429988 GTCCAACGCGAGCTC TGCGCC CTGGC GGCGCG TTTTGCCCGCGTTTT TERM 1912 1429988 - 1430002 + g 77 -4.2 -4.88736 | overlap 1429976 1429975 1429984 TCTGCGCCCTGGCGG CGCG TTTTGCC CGCG TTTTTGTAGGTAGTG TERM 1913 1430654 - 1430667 + g 81 -8.1 -4.2349 | AGTGTAATTACGCCG CCAGC CTGG GCTGG TTTTAGCTGTGCCAC TERM 1914 1430953 - 1430968 + g 82 -5.4 -5.00616 | overlap 1430955 AAGGCGCACGCCCAG TTTGGC ATTA GCCAGA TTTTTTCGCGCGCCG TERM 1915 1431930 - 1431943 + G 71 -5.9 -4.33582 | overlap 1431928 CGTCATCTTTTTTCG CCGCG CCTG CGTGG TTCTTTATTGTTAGG STY1479 1431906 - 1432967 + | ATP-binding protein STY1480 1433112 - 1433333 + | putative lipoprotein TERM 1916 1433398 - 1433375 - T 100 -14.6 -3.74747 | gap 1 GCAACGCGCATTAAA CCCGGCAGGCC TGA GGC-TGCCGGG GAAGGGTAATGTTAT ansP 1434903 - 1433410 - | L-asparagine permease STY1482 1435416 - 1436048 + | hypothetical protein TERM 1917 1436143 - 1436109 - f 82 -7.8 -4.56775 | opp_overlap 1436095, overlap 1436117 AGCTGGCGTTAAAAA TTTTAACACGCCGCTA TTT TGGCGGCGTGTCGCAA AGAGATTCTCAGAAC TERM 1918 1436135 - 1436117 - f 74 -10.2 -3.17553 | opp_overlap 1436095, overlap 1436109 TTAAAAATTTTAACA CGCCGCTA TTT TGGCGGCG TGTCGCAAAGAGATT STY1483 1436331 - 1437176 + | N-hydroxyarylamine O-acetyltransferase STY1484 1438105 - 1437212 - | hypothetical protein TERM 1919 1437531 - 1437521 - G 90 -4.6 -5.37593 | opp_overlap 1437530 CTGGAAAGGAAAAAA GCCG TTA CAGC CAATTTGCTGGCTGA TERM 1920 1438137 - 1438170 + r 100 -8.7 -5.27335 | opp_overlap 1438138, overlap 1438138 CTGAAGAATCATCAT AGCCTGTGCGTTGCC GAAT GACGACGCCCAGGCG TTTTTCTTTGCCCGG TERM 1921 1438138 - 1438169 + r 93 -12.2 -3.75678 | opp_overlap 1438138, overlap 1438137 TGAAGAATCATCATA GCCTGTGCGTTGCC GAAT GACGACGCCCAGGC GTTTTTCTTTGCCCG TERM 1922 1438169 - 1438138 - R 79 -12.2 -2.89421 | opp_overlap 1438138 1438137 TGAAGAATCATCATA GCCTGTGCGTTGCC GAAT GACGACGCCCAGGC GTTTTTCTTTGCCCG narV 1438891 - 1438211 - | respiratory nitrate reductase 2 gamma chain narW 1439583 - 1438888 - | respiratory nitrate reductase 2 delta chain narY 1441127 - 1439583 - | respiratory nitrate reductase 2 beta chain TERM 1923 1440161 - 1440171 + g 70 -6.8 -4.09685 | overlap 1440138 GCGACCGTTGGGCGG CGTC GAT GACG TTTTGCGGGATGCCC TERM 1924 1441030 - 1441044 + g 73 -5.6 -4.59773 | TATTCCATCCCTTCA CGTCCG GTC CAGACG TTTTTACAGGTGACG narZ 1444852 - 1441124 - | respiratory nitrate reductase 2 alpha chain TERM 1925 1444358 - 1444372 + g 74 -10 -3.66178 | opp_overlap 1444360 GTTAGCGGCGGCAAT GAGCTG ATT CAGCTC TTTCCAGTTCGAACG TERM 1926 1444476 - 1444504 + g 85 -12.5 -3.48772 | GCCAGCACCGGATCG CTGTGGCGGGA AAGGGCC TCTCGCCACAG TTCTATCAGCCGCTT narU 1446332 - 1444944 - | nitrite extrusion protein TERM 1927 1445152 - 1445119 - G 73 -5.1 -4.54449 | gap 1, overlap 1445120 ATAGCGGAGATAAAA CCGAGCGCGGCGGCGG TAT CCGTCACCGCT-TCGC GCTGCGCCTGCTCAT TERM 1928 1446384 - 1446398 + r 73 -7.8 -4.12599 | opp_overlap 1446380 1446384 1446382 CACAAAAAAGAGACA GAGCGT CAC GCGCTC TTTTGAGAACTTATT STY1490 1447125 - 1446547 - | putative regulatory protein TERM 1929 1448411 - 1448395 - g 93 -9.3 -4.82901 | GTGCCGGCAGAAAAA GCGGCGG CGG CCGGCGC GATAGAAACGATGGC smvA 1447243 - 1448730 + | methyl viologen resistance protein SmvA TERM 1930 1449253 - 1449233 - T 77 -3.9 -5.13344 | overlap 1449234 1449235 ACATCAAGAGAAAAA GCCAGCCCT GAA AGGACTGAT GGTGATGGGCGGCAA adhP 1451382 - 1450372 - | alcohol dehydrogenase TERM 1931 1450686 - 1450706 + g 79 -3.2 -5.14563 | gap 1, opp_overlap 1450686 CGACCGCGGTAACCA CCGCT-GCG TGCG CGCCACCGG TTTTTTCCTGCACAA TERM 1932 1451149 - 1451131 - G 85 -8.8 -4.37886 | opp_overlap 1451141 1451141, overlap 1451132 GCATCCTTCATAAAA CCACGCGA CAC TCGCGCGA TCGCCGGGTTTCAGC TERM 1933 1451419 - 1451445 + r 73 -9.6 -3.41936 | opp_overlap 1451419 1451424 1451429, overlap 1451417 GTGAACTGCATAGCA GGTAATAGCA GGTAAGG TGCTATTACC TCTTTAGGATTAATA TERM 1934 1451659 - 1451634 - R 74 -11.1 -2.82317 | opp_overlap 1451631, overlap 1451631 TAAAGAAGAAAGTGA TATCCGGCGGC ATTC ACCGCCGGGTA CGTATTAAATGGAAG sfcA 1453397 - 1451664 - | malate dehydrogenase TERM 1935 1452381 - 1452368 - G 72 -2.3 -4.9218 | opp_overlap 1452373 GATCGACCATAAAAA CGTTC TGTC GAGCG GCATCTTCGCTTAAA TERM 1936 1453511 - 1453490 - R 100 -13.1 -5.38054 | opp_overlap 1453490 1453507 TCCTATAAACAAAAA CACCATTGC AGAT GCAATGGTG TTTAACGTCATTTCA TERM 1937 1453490 - 1453511 + r 90 -13.1 -3.65353 | opp_overlap 1453490, overlap 1453507 TCCTATAAACAAAAA CACCATTGC AGAT GCAATGGTG TTTAACGTCATTTCA rpsV 1453681 - 1453538 - | 30S ribosomal subunit S22 STY1496 1453991 - 1453776 - | biofilm-dependent modulation protein osmC 1454503 - 1454934 + | osmotically inducible protein C TERM 1938 1454944 - 1454975 + T 77 -11 -3.15638 | gap 1 GCCTGATAACCTCGT CAGCCCGGTA-ACGA CTC TTGTTTATCGGGCTG TTGAATATCGCTTTT hlyE 1455972 - 1455055 - | hemolysin E TERM 1939 1455868 - 1455850 - G 70 -8.8 -3.72893 | opp_overlap 1455830 TATGGTTTCATCAAA GGTCTTCC AGG GGATGACC TGGTCGAGGTATTTG STY1499 1456801 - 1456097 - | hypothetical protein hdeB 1457501 - 1457830 + | acid-resistance protein TERM 1940 1457850 - 1457867 + F 75 -6.2 -4.53036 | opp_overlap 1457850 1457842, overlap 1457845 AAACTGATATCAAAA CCCGGC CTGTGT GTCGGG TTTTACTATTTGTGA TERM 1941 1457871 - 1457899 + F 79 -11.9 -3.25836 | opp_overlap 1457842, overlap 1457845 1457869 CTGTGTGTCGGGTTT TACTATTTGTGAC ACC GTCACAAATAGCA TCTTCCATTTCTTCT TERM 1942 1458359 - 1458342 - g 100 -6.3 -5.86061 | gap 1, overlap 1458344 CCCGAGGAAAAAAAA CT-GTGGC ACA GCCACCAG TACGAGGTGAAATCC TERM 1943 1458403 - 1458372 - g 74 -9.5 -3.62572 | gap 1 CAGTACGAGGTGAAA TCCGGTA-GCCTGG TGGCG CCAGGCTTACCGCA GGTCGCTGATAAGGC STY1502 1457973 - 1458758 + | putative secreted protein TERM 1944 1460183 - 1460210 + G 100 -7 -5.77853 | CTGCTTTTTATGGGC GAAGAGTATGGC GAAA GCCGTCCTTTTC TTTTTTTTACCGATT STY1503 1458887 - 1460671 + | putative hydrolase TERM 1945 1460972 - 1460961 - g 74 -7.2 -4.07885 | opp_overlap 1460970 CAGCTCGCTGGAAAA CGCC TGGT GGCG CGACGTGCTTGAATA TERM 1946 1461029 - 1461050 + G 77 -3.5 -5.00616 | overlap 1461033 ATTTCGATATTGACT GGTCGCGCC GACT GACGCTGCC TTTTTTAGGCGACAC TERM 1947 1461359 - 1461347 - g 83 -7.7 -4.66537 | opp_overlap 1461355 GGGTGGAAGATAAAA TCGTC TTC GACGA TACACATCGGCTGAT TERM 1948 1461527 - 1461509 - g 80 -4.5 -5.02074 | opp_overlap 1461509, overlap 1461511 TCACCGTGGAAAAAA TTCTCGC TAAAG GCGAGCA ACTTCCTGATGACTG STY1504 1460668 - 1463196 + | putative hydrolase glgX 1463253 - 1465064 + | putative glycogen debranching protein TERM 1949 1465370 - 1465354 - T 73 -10.8 -3.05384 | opp_overlap 1465354, overlap 1465337 GCGCTCCGGACCCAA CCGGCC TTAAT GGCCGG TTTTTTACTGGCGCT TERM 1950 1465354 - 1465370 + T 100 -10.8 -5.14965 | opp_overlap 1465354 1465337 GCGCTCCGGACCCAA CCGGCC TTAAT GGCCGG TTTTTTACTGGCGCT STY1507 1466622 - 1465441 - | putative aminotransferase STY1508 1467202 - 1466582 - | putative transport protein STY1509 1467383 - 1468555 + | hypothetical protein TERM 1951 1468533 - 1468547 + T 72 -2.8 -5.0538 | opp_overlap 1468533 AGGGAAGGGATCAAA CTTATG GGC CAGAAG TTTTTTGACATGCAC TERM 1952 1468811 - 1468773 - T 74 -8.2 -3.967 | gap 1, opp_overlap 1468773 AACGGATTAAGCAAA TGCTTAGCACCACGCGG TTTTGT CCGCGTAG-GCAAAACA TTCAATCCAGCCACA TERM 1953 1469381 - 1469412 + T 93 -10.4 -4.72497 | gap 1, opp_overlap 1469386, overlap 1469386 GATGCTTATTCTCGG TAAAACCGGTAGCAT TAT GTG-TACCGGTTTTA TTTTATTCATCCCTG TERM 1954 1469386 - 1469407 + T 85 -5.9 -5.28831 | gap 1, opp_overlap 1469386, overlap 1469381 TTATTCTCGGTAAAA CCGGTAGCAT TAT GTG-TACCGG TTTTATTTTATTCAT STY1513 1470498 - 1469419 - | putative isomerase TERM 1955 1470341 - 1470311 - G 74 -7.8 -4.08216 | opp_overlap 1470311, overlap 1470299 GTACTGTCGTTAAAA CAGATTACATCA CCTTCTT TGATATAATCTG TTACTTTACTAAAGT TERM 1956 1470647 - 1470668 + r 79 -4.3 -5.19998 | TTAATGCAGTAGCAT GGACGATCA GATT TGACCGCCC TTTTCTTTTGCTTAT STY1514 1471168 - 1470680 - | putative regulatory protein TERM 1957 1471137 - 1471151 + g 100 -5 -5.54907 | opp_overlap 1471137 ATTTGCTCGGAAATA TGTGTA TCT TGCACA TTTTTATTTTCTGAC STY1517 1472365 - 1473606 + | putative multidrug efflux protein TERM 1958 1473621 - 1473607 - f 76 -8.6 -4.06866 | CCAGAAACAGAATAA TGTGAC AAC GTCACA AGCATTATTACTCCC TERM 1959 1474243 - 1474231 - g 84 -3.3 -5.32882 | CAGGATGATAAAAAA CCACT GAA AGAGG ACGAGAGCGTTTCCC pqaA 1473676 - 1475232 + | hypothetical protein TERM 1960 1475292 - 1475263 - f 95 -13.1 -3.9392 | opp_overlap 1475262 TCTGATTTTAAATAA TTTTATCCATCAC GCTT GCGATGGATAAAA ATCCTCTGCGATAAA TERM 1961 1475396 - 1475368 - f 87 -9.8 -4.26634 | gap 1 AAAATAACCTTAAAA TATTGTGGTC-AG GCCG CTAGACCACAATA AGAGGATTAATCATG TERM 1962 1475843 - 1475861 + GF 76 -11.6 -2.59668 | overlap 1475842 1475857 CGGTTCCCCGCTCGG CGGCGCGG TGT CCGGGCCG ATTGTGGGCCTGTTG STY1519 1475409 - 1476695 + | membrane transport protein TERM 1963 1477485 - 1477472 - gT 77 -8.1 -4.07678 | overlap 1477465 GGCCAAAACAGGAAA CGTCG CTGC CGACG AACCTGATCACCTAC STY1520 1476670 - 1477695 + | putative alcohol dehydrogenase TERM 1964 1477710 - 1477737 + T 95 -13.5 -3.90744 | overlap 1477712 ATTTACGGCGAGTTC TACCGCATGGC ATATCC GCCATGCGGTG TTATTTACCGACAAA TERM 1965 1477712 - 1477735 + T 93 -13.9 -3.54488 | overlap 1477710 TTACGGCGAGTTCTA CCGCATGGC ATATCC GCCATGCGG TGTTATTTACCGACA STY1521 1478545 - 1477754 - | putative regulatory protein TERM 1966 1478086 - 1478105 + g 70 -5 -4.38712 | overlap 1478084 1478087 TCGCCTCTATTTGGT TGATGACG TCAA CGTTATCG TTTTGTGCGGCTAAG STY1522 1479682 - 1478591 - | putative secreted hydrolase TERM 1967 1478849 - 1478879 + g 75 -11.8 -2.98719 | TGCAAGCGTATTCAT TGCGTCGTGGGCGG ATG TCGCTTGCGGCGCA TATGTGGTGTAATAA TERM 1968 1479188 - 1479170 - G 76 -8.9 -3.922 | AAACGCGTAATGAAA TGGCGAT TTCAG ATCGCCA AACCGATGCAGTTCC TERM 1969 1479274 - 1479261 - G 71 -5.9 -4.33274 | opp_overlap 1479261 1479262, overlap 1479262 CCGACAGTAGCAAAA CGGGC CAGC GCCCA TTCTCCCAACGAGGT TERM 1970 1479475 - 1479486 + g 91 -3.6 -5.61596 | overlap 1479473 AGCTTATCCCCTGGC TGCC ATCC GGCG TTTTTTTATCAAACT TERM 1971 1480336 - 1480350 + G 73 -5.7 -4.45517 | GCTCTGCGCACCCGT TGGCA AAAGA TGCCA TTTTGTCGCTCATTT TERM 1972 1480556 - 1480545 - g 79 -7.2 -4.4267 | opp_overlap 1480545, overlap 1480546 CTGGAAAAGTTAAAA CGCG TCAG CGCG GATGCTAAAGCGATT hyaA2 1480110 - 1481213 + | uptake hydrogenase small subunit TERM 1973 1483352 - 1483372 + G 100 -7.6 -5.14563 | CTGGCGCAAAGGCGT TATCAGCG AAATC CGCTGGTA TTTTTTCCTCGAAAA hyaC2 1482984 - 1483712 + | Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC2 hyaD2 1483718 - 1484326 + | hydrogenase 1 maturation protease STY1528 1484326 - 1484625 + | hydrogenase isoenzyme formation protein hyaE2 1484622 - 1485032 + | hydrogenase-1 operon protein HyaE2 hyaF2 1485050 - 1486111 + | hydrogenase-1 operon protein HyaF2 STY1531 1486099 - 1486869 + | putative ATP/GTP-binding protein TERM 1974 1487405 - 1487430 + F 70 -4.7 -4.52047 | gap 1, overlap 1487408 AAAATGCAAGTTAAG CATGGCTACATC AAT GGTGT-GCCCTG TTTTCTGCTGTAATA TERM 1975 1487657 - 1487669 + F 71 -3.3 -4.84274 | CTGAAATAGCACTTC TTCGC TTC GCGTA TTTTTACTATGGTTA STY1533 1487971 - 1488513 + | hypothetical protein STY1534 1489516 - 1488569 - | hypothetical protein STY1535 1490098 - 1489739 - | hypothetical protein TERM 1976 1490065 - 1490042 - G 86 -12.4 -3.83502 | overlap 1490054 TATCCCGAGACGAAA GCGCGAACGA AATG TCGATCGCGC CAGGCGGGCAAAGAG STY1536 1491225 - 1490098 - | putative aldehyde-dehydrogenase STY1537 1491328 - 1492200 + | putative regulatory protein TERM 1977 1492812 - 1492822 + G 74 -2.4 -5.0538 | GTCAGTATTTTGGCT GGCG CAC CACC TTTTTTGCCATCGGC STY1538 1492316 - 1493506 + | sugar efflux transporter TERM 1978 1493548 - 1493509 - T 71 -9.5 -3.15841 | gap 2, opp_overlap 1493507 1493519, overlap 1493507 1493511 ACAACCGCATTAAGA CATT--CGTCTGCCGGGAA CAGG TTTCCGGCAGACGACAATG CGCCTTAGTGGTACG TERM 1979 1493544 - 1493511 - T 86 -13.9 -3.13639 | opp_overlap 1493507 1493519, overlap 1493507 1493509 AACCGCATTAAGACA TTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAC AATGCGCCTTAGTGG STY1539 1494218 - 1493553 - | multiple drug resistance protein MarC marR 1494477 - 1494911 + | DNA-binding transcriptional repressor MarR marA 1494931 - 1495314 + | DNA-binding transcriptional activator MarA marB 1495343 - 1495558 + | hypothetical protein TERM 1980 1495565 - 1495583 + T 100 -12.4 -5.52986 | CACCTTTAACCTCTT TGCCCCGT TTT GCGGGGCA TTTTTTTAGTACCGT STY1543 1496579 - 1495677 - | O-acetylserine/cysteine export protein TERM 1981 1497640 - 1497652 + G 79 -3.3 -5.24129 | TCGACCAATGATGAC GACCG GCA CCGTC TTTTTTATCGCCGGG STY1544 1496807 - 1497994 + | putative MFS-type transporter YdeE TERM 1982 1498363 - 1498397 + T 100 -16.5 -4.55287 | gap 1, opp_overlap 1498352 1498351, overlap 1498364 TAATCCCTCGCAGAG CCGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCGC TTTTGTCTGGATGGC TERM 1983 1498364 - 1498396 + T 100 -20 -3.3269 | gap 1, opp_overlap 1498352 1498351, overlap 1498363 AATCCCTCGCAGAGC CGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCG CTTTTGTCTGGATGG TERM 1984 1498443 - 1498426 - T 100 -10.5 -6.11644 | opp_overlap 1498433 GCAGGCAAAAAAAAA CCGCCGG TTCA CCAGCGG TAAATGCTTGCATGG STY1545 1499058 - 1498702 - | hypothetical protein TERM 1985 1498956 - 1498977 + g 85 -2.1 -5.52384 | opp_overlap 1498940, overlap 1498962 CATCCTCAATAGCAT GAGGCGGCG GCGG TGCCACGTC TTTTTTTAATCCCCC STY1547 1499485 - 1500012 + | competence damage-inducible protein A TERM 1986 1500082 - 1500064 - T 100 -12.4 -5.88565 | opp_overlap 1500061 1500064 GTCAGAATAAAAAAA TGCGAGCC TAT GGCCCGCA TCGTATGTGCAATAT TERM 1987 1500064 - 1500082 + T 71 -10.2 -2.69977 | opp_overlap 1500064, overlap 1500061 GTCAGAATAAAAAAA TGCGAGCC TAT GGCCCGCA TCGTATGTGCAATAT STY1548 1500314 - 1500132 - | hypothetical protein TERM 1988 1500158 - 1500176 + g 82 -5.2 -5.03145 | overlap 1500151 1500153 1500159 ATTTCCGTCCGCCAC TGTGGCTA TTC TGGCCACC TTTTTTACCCGCTTC dcp 1502701 - 1500659 - | dipeptidyl carboxypeptidase II TERM 1989 1502532 - 1502482 - G 90 -4.7 -5.42259 | TCATCGCGAAAAAAA CGCTGGTGACGCGTGA-CAGAAGCG CCC CGCTT-TGCTCCAGCGCCAGAAGCG TATTCGTAAAATCAG STY1550 1502840 - 1503586 + | 3-hydroxy acid dehydrogenase STY1551 1503716 - 1504402 + | putative regulatory protein STY1552 1504583 - 1504786 + | hypothetical protein TERM 1990 1504817 - 1504843 + T 73 -10.8 -3.10901 | opp_overlap 1504807, overlap 1504815 1504819 AGAACCGCTCCGGCC TTCCCGGTAGCA TAA TGCTACCGGGTC TCTGTTACGCTATTT TERM 1991 1504819 - 1504841 + T 100 -17.8 -3.10513 | opp_overlap 1504807, overlap 1504817 1504815 AACCGCTCCGGCCTT CCCGGTAGCA TAA TGCTACCGGG TCTCTGTTACGCTAT STY1553 1506319 - 1504853 - | putative D-mannonate oxidoreductase TERM 1992 1506459 - 1506405 - R 100 -8.8 -4.99947 | gap 3, overlap 1506409 GCTAATTAAACAAAA GTGACCGGACAGCATGGCCGAAACCGC ATTA ACG-TTCCGGCCATACCGTC-GA-CAC GATTTAACTCGTCTG STY1554 1507842 - 1506463 - | putative membrane transport protein TERM 1993 1507662 - 1507621 - G 72 -2.1 -4.91852 | opp_overlap 1507624, overlap 1507647 1507657 TTTACCAAAAACAAA GGCGCCGATAATTCTGGCT ATAT AACCTGCACCATAGGTGCC CATTGCCAGAATAAG rspB 1508759 - 1507896 - | starvation sensing protein RspB rspA 1509984 - 1508770 - | starvation sensing protein RspA TERM 1994 1509452 - 1509462 + g 81 -8.2 -4.3739 | overlap 1509450 1509457 CACAATTGTTCTTCC GGCC ACT GGCC TTTTGTCGCGGGCTC TERM 1995 1510098 - 1510066 - R 100 -18.5 -4.67755 | ATATTTATCTAAAAA GCGCTGCCAGATCAC AAA ATGTTCTGGCAGCGC GGCAATGTTACGTAC STY1558 1510432 - 1510106 - | hypothetical protein STY1560 1510585 - 1510926 + | hypothetical protein TERM 1996 1511154 - 1511112 - g 76 -9.4 -3.96624 | overlap 1511133 GATCTCTACGACAAA CACATCC-ACGACCAAAGCG AACGG CGCTTTG-TCGTCGAATGCG ACGGTGAAAACGCCG TERM 1997 1511273 - 1511253 - g 77 -8.1 -4.21908 | GAGTACCAGGGAAAA GGCCTGGCG TCA CGCGCGGCC AAACTGGCGATGGAT speG 1510962 - 1511522 + | spermidine N1-acetyltransferase TERM 1998 1511532 - 1511508 - T 79 -10.6 -3.53811 | opp_overlap 1511524 1511524, overlap 1511509 1511512 1511523 TCTACGCTCCTGAAA CCCACCGCGC AGTAA GCGCGGCGCG GTAGTCACGGAGAGT TERM 1999 1511536 - 1511509 - T 71 -10.5 -2.72144 | opp_overlap 1511524 1511524, overlap 1511508 1511512 1511523 CTACGCTCCTGAAAC CCACCGCGCAG TAAGCG CGGCGCGGTAG TCACGGAGAGTCGCA TERM 2000 1511528 - 1511512 - T 71 -10.8 -2.64155 | opp_overlap 1511524 1511524, overlap 1511508 1511509 1511523 CGCTCCTGAAACCCA CCGCGC AGTAA GCGCGG CGCGGTAGTCACGGA STY1562 1512273 - 1511563 - | hypothetical protein TERM 2001 1512878 - 1512857 - g 74 -6.5 -4.3739 | GATGCCCGGAGAAAA GCAGCAAAC AGGC GTTAGCCGC AGGACGTTAGTGAAA TERM 2002 1513307 - 1513289 - g 73 -5.3 -4.59773 | gap 1, opp_overlap 1513304, overlap 1513291 CGCCAGCCTGAAAAA GACCGTAG AGAT CTACGG-C AATGAAGCCGTTTAT TERM 2003 1513306 - 1513291 - g 73 -9 -3.91506 | opp_overlap 1513304, overlap 1513289 CCAGCCTGAAAAAGA CCGTAG AGAT CTACGG CAATGAAGCCGTTTA dmsA1 1512843 - 1515281 + | putative dimethyl sulphoxide reductase subunit TERM 2004 1515283 - 1515323 + F 73 -7.4 -4.07568 | gap 1, opp_overlap 1515278, overlap 1515284 TCGAAAAAATCTAAG CCGCCTGCTCCGGG-GCGT TTTT ACGCGCCCGGAGCTCCCCG TTTTGCGAACACAAC TERM 2005 1517247 - 1517234 - g 93 -4.5 -5.45652 | overlap 1517214 ATTTTCAAGAAAAAA TGCCC GGAG GAGCA CTACGTCGCTTTCCG TERM 2006 1517664 - 1517636 - g 74 -7.3 -4.08767 | CTCATTCCGGCAAAA GTCACGCCGCGCA TAT TGCCTGGCGTCAC CGCTATCGGCCAGGG dmsA2 1515383 - 1517818 + | putative dimethyl sulphoxide reductase subunit dmsB 1517829 - 1518446 + | putative dimethyl sulphoxide reductase subunit TERM 2007 1518581 - 1518571 - g 70 -6.8 -4.17762 | opp_overlap 1518576 GATGTGGCAAAACAA CGCA TCG TGCG CAGCATGTTTTTTCT TERM 2008 1518576 - 1518588 + G 95 -5.5 -5.38047 | opp_overlap 1518571 GGCAAAACAACGCAT CGTGC GCA GCATG TTTTTTCTGTGGCTG dmsC 1518448 - 1519302 + | putative dimethyl sulphoxide reductase subunit TERM 2009 1519309 - 1519328 + F 72 -9.2 -3.6512 | opp_overlap 1519307, overlap 1519310 1519320 1519321 GCAGGTTAATTTATG CGTGCGGG GCGA CCCGCACC TTTCGGGATTGTTTG TERM 2010 1519310 - 1519327 + F 79 -12.7 -2.78349 | opp_overlap 1519307, overlap 1519309 1519320 1519321 CAGGTTAATTTATGC GTGCGGG GCGA CCCGCAC CTTTCGGGATTGTTT TERM 2011 1519382 - 1519404 + G 72 -2.6 -4.89477 | overlap 1519385 ATGATTTTGCAGTAA CGGCGCGT GTTCTTG GCGCGTTG TTTTATTATTCGCCG STY1569 1519345 - 1519959 + | twin-argninine leader-binding protein DmsD TERM 2012 1519988 - 1519971 - f 81 -8.4 -4.4017 | opp_overlap 1519971 TTAATCCCCACAAAA GGCAGG ATTTTA CCTGCC TTTTCTCCCATTGTG TERM 2013 1519971 - 1519988 + F 81 -8.4 -4.43859 | opp_overlap 1519971 TTAATCCCCACAAAA GGCAGG ATTTTA CCTGCC TTTTCTCCCATTGTG TERM 2014 1520037 - 1520025 - f 84 -7.7 -4.87665 | TTTTATCTACAAAAA GTGAC AAC GTCAC ACCTCGCTTCTATTT TERM 2015 1520141 - 1520119 - f 80 -12.2 -3.07501 | overlap 1520121 ACATAATTGTTAATA GATGTTTAAC AGT GTTAAACATC ACGCTCCGCTGGAAT TERM 2016 1520448 - 1520459 + G 71 -5.8 -4.25104 | overlap 1520437 CTTTACTGGTCGGTA TCCC GAGC GGGA TTTTACTCAGCCGAC STY1570 1520264 - 1520974 + | putative ABC transporter membrane protein TERM 2017 1521444 - 1521418 - g 70 -8.8 -3.65542 | overlap 1521416 1521421 CCGAGTCGGAAAATA TCACCACCATCT CGC AAATGGTGGCAA AAATCGAACAAGTCC STY1571 1521003 - 1521905 + | putative ABC transporter periplasmic binding protein TERM 2018 1522174 - 1522188 + G 76 -3.4 -5.03405 | overlap 1522176 GTATTGGCGTTCTGC CCGCTG TGA CGGCCG TTTTTCTCTACTCTT STY1572 1521915 - 1522562 + | putative ABC transporter membrane protein TERM 2019 1522917 - 1522898 - g 82 -11.4 -3.85698 | TTGGGTTGGGACAAA GCGCGCTG CAAG CAACGCGC CGAAGAGTTGATGGA TERM 2020 1523200 - 1523180 - g 80 -8.9 -4.15106 | opp_overlap 1523182 GACGAAGCGCTAAAA CTCGGCGAC CGT ATCGCCGTG TTCCGTCAGGGGCGA STY1573 1522562 - 1523710 + | putative ABC transporter ATP/GTP-binding protein TERM 2021 1523716 - 1523744 + F 73 -10.2 -3.04443 | opp_overlap 1523703 1523711, overlap 1523711 1523708 AAGCAGCTAACGTTG CCGCCGGATCGC CTCTC GCTATCCGGCAG TATCATTATTGTACG TERM 2022 1523772 - 1523782 + F 74 -6.8 -4.2349 | ACGCAATATTATATC GCAC ATA GTGC TTTTGCGTCTGACGC TERM 2023 1524818 - 1524798 - g 70 -6.8 -4.07568 | TTTTTGCGTGCAAAA TCCTGGCG GTGCT CGCCAGCA GCGGGTCTGGCGCGC TERM 2024 1525050 - 1525020 - g 71 -9.7 -3.56092 | opp_overlap 1525023, overlap 1525021 1525023 TGATGATTTGTGAAA TGACCGGCGAGTA TCAGT TACTCCCCGGTCT GCTGATTGCCTGTGT TERM 2025 1525049 - 1525021 - g 79 -13.2 -2.73441 | opp_overlap 1525023, overlap 1525020 1525023 GATGATTTGTGAAAT GACCGGCGAGTA TCAGT TACTCCCCGGTC TGCTGATTGCCTGTG STY1574 1523882 - 1525135 + | putative voltage-gated ClC-type chloride channel ClcB bioD 1525786 - 1525091 - | putative dithiobiotin synthetase TERM 2026 1525601 - 1525624 + g 80 -8.9 -4.16842 | opp_overlap 1525601 1525603 CAACTCCAGCGAAGA GACGCTTTG CAATAC CAGAGCGTC TTTGTTGCGCATCCC STY1576 1527072 - 1525912 - | putative regulatory protein TERM 2027 1526636 - 1526650 + g 74 -7.1 -4.24204 | opp_overlap 1526646 TCGTAATACGGCATC CGGTG CACAA CACCG TTTTCGGTATCGATA TERM 2028 1526905 - 1526934 + g 77 -8.5 -4.08317 | gap 1, overlap 1526908 TTCCACCATCAGCCC GACGGCGGGACGTC CAC GACTGCCCGCC-TC TTTAATTTCAAGTTC TERM 2029 1526908 - 1526932 + g 79 -11.3 -3.62756 | overlap 1526905 CACCATCAGCCCGAC GGCGGGACGTC CAC GACTGCCCGCC TCTTTAATTTCAAGT STY1578 1528159 - 1527260 - | putative regulatory protein TERM 2030 1527593 - 1527575 - G 83 -7.4 -4.66163 | opp_overlap 1527591 ATGCGGATCGAAAAA GACGAAAG GTT CTTCCGCC AGTTCTGTCAGACTG TERM 2031 1527591 - 1527617 + g 70 -6.7 -4.07568 | gap 2, opp_overlap 1527575, overlap 1527609 ACGAAAGGTTCTTCC GCCAGTTCTGTCA GAC TGAC-GA-CTGGC TTTTGCGCCAGCCGA TERM 2032 1527836 - 1527824 - G 75 -6.3 -4.56133 | GCGGAACAACGAAAA GGTAT GCG ATACC GCCCGAATAAAAGGC TERM 2033 1527894 - 1527926 + g 81 -11.9 -3.54424 | opp_overlap 1527902, overlap 1527895 TCGCCCGCTTCGCCC TGATGCAACCGCTCG GCG CGAGCGGCGGCGTCG TTTACCAGACTCAGG TERM 2034 1527895 - 1527925 + g 79 -13.2 -2.72511 | opp_overlap 1527902, overlap 1527894 CGCCCGCTTCGCCCT GATGCAACCGCTCG GCG CGAGCGGCGGCGTC GTTTACCAGACTCAG TERM 2035 1527918 - 1527902 - G 84 -13.7 -3.05384 | opp_overlap 1527895 1527894 TTCGCCCTGATGCAA CCGCTCG GCG CGAGCGG CGGCGTCGTTTACCA STY1579 1528279 - 1529532 + | putative membrane transport protein TERM 2036 1529568 - 1529544 - T 100 -9.9 -4.8743 | opp_overlap 1529547, overlap 1529546 1529547 CTGAAAAGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 2037 1529566 - 1529546 - T 95 -12.5 -4.03308 | opp_overlap 1529547, overlap 1529544 1529547 GAAAAGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 2038 1529565 - 1529547 - T 93 -16 -2.99545 | opp_overlap 1529547, overlap 1529546 1529544 AAAAGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 2039 1529547 - 1529565 + T 100 -16 -4.91109 | opp_overlap 1529546 1529544 1529547 AAAAGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 1530105 - 1529647 - | transposase for insertion sequence element IS200 TERM 2040 1530218 - 1530236 + H 100 -16 -4.18197 | opp_overlap 1530208 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAT TERM 2041 1530253 - 1530285 + H 74 -11.3 -2.90496 | opp_overlap 1530254 1530255, overlap 1530250 TTTCCATAGACAATA ATCCGGCGATAGC AACGTGC GCTATCGCCGGGC TGGTTTCACGCCACG TERM 2042 1530284 - 1530254 - H 95 -13.3 -3.92996 | opp_overlap 1530253 1530250, overlap 1530255 TTCCATAGACAATAA TCCGGCGATAGCA ACGTG CGCTATCGCCGGG CTGGTTTCACGCCAC TERM 2043 1530283 - 1530255 - H 100 -16.8 -2.95316 | opp_overlap 1530253 1530250, overlap 1530254 TCCATAGACAATAAT CCGGCGATAGCA ACGTG CGCTATCGCCGG GCTGGTTTCACGCCA asr 1530638 - 1530889 + | acid shock protein precursor TERM 2044 1530904 - 1530922 + F 84 -8.1 -4.57569 | gap 1, opp_overlap 1530899, overlap 1530904 1530905 AGTCGTAACATGCTG C-GGCGCG CCCC CGCGCCCG TTTTTACGGCGCTAA TERM 2045 1530905 - 1530920 + F 76 -11.8 -2.60211 | opp_overlap 1530899, overlap 1530904 1530904 GTCGTAACATGCTGC GGCGCG CCCC CGCGCC CGTTTTTACGGCGCT STY1583 1531158 - 1531979 + | putative secreted protein TERM 2046 1531988 - 1532008 + T 78 -12.6 -2.62263 | opp_overlap 1531980 GGATTAATGCGGGAA TCGCTGCC TGACC GGCAGCGA TCGTCTCAGGCAAAT STY1584 1532343 - 1532014 - | multidrug efflux system protein MdtI STY1585 1532692 - 1532330 - | multidrug efflux system protein MdtJ TERM 2047 1533743 - 1533710 - g 71 -4.5 -4.56775 | gap 1, overlap 1533712 ATCTGGTGCTAAAAA CA-GCGATCAGTATCG TGA CGGGACTGGTCGCATG GGGAATGCTGGCCGC tqsA 1533109 - 1534143 + | putative transport protein TERM 2048 1534301 - 1534284 - T 100 -12.7 -4.94992 | overlap 1534295 TGAAATGTATAAAAA CGGCCTC CAAA GAGGCCG CCGCACGTTTAAAAG pntB 1535706 - 1534318 - | pyridine nucleotide transhydrogenase TERM 2049 1534697 - 1534710 + g 72 -3.7 -4.72386 | opp_overlap 1534685 AAACGCACGTTGATA CCGCG CGCA CGCAG TTTTTCGGTGATTTC pntA 1537246 - 1535717 - | NAD(P) transhydrogenase subunit alpha TERM 2050 1537973 - 1537959 - g 71 -7.8 -4.03234 | opp_overlap 1537959 CGCCGCGCAGATAAA GAAGGC GCA GCCTCC TTCTATGTTGTCGAC TERM 2051 1538315 - 1538298 - g 70 -7 -4.09117 | opp_overlap 1538314, overlap 1538311 1538314 TTTATCTATAAACAA GATGCG AAAAAA CGCATC GTCCAGAGCCCGGAC STY1590 1537773 - 1538717 + | hypothetical protein STY1591 1539288 - 1538899 - | putative bacteriophage transcriptional regulator STY1592 1539712 - 1539260 - | hypothetical protein STY1593 1539917 - 1539702 - | hypothetical protein TERM 2052 1539858 - 1539834 - G 74 -4.9 -4.68103 | overlap 1539835 1539836 GTAACGTGAATAAAA CCCTGAACGGC GGT GCAGTTCAGCA GTACACCAACCGACA STY1594 1540137 - 1539907 - | hypothetical protein TERM 2053 1540138 - 1540148 + r 71 -6.8 -4.06384 | opp_overlap 1540137 TGATAACGTAATCAT CTGG CCT CCAG TTTCTGCTGTTCCCG STY1595 1540817 - 1540134 - | hypothetical protein TERM 2054 1540752 - 1540779 + g 85 -7 -4.84529 | gap 1, opp_overlap 1540741 AGCAGCCTCATGCGG GTTGCCGGATGCT GCC AGCG-CCAGCAAC TTTTTCAGTTTCTCA STY1596 1541029 - 1540814 - | hypothetical protein STY1597 1541405 - 1541022 - | hypothetical protein TERM 2055 1541422 - 1541455 + r 82 -2.9 -5.59879 | overlap 1541423 TGATTTCTCCGGTGT ATGTGACGCCCAGCC GTGC GGCAAGGCGTTCCAG TTTTTTCTGTTTGTG STY1598 1541704 - 1541402 - | hypothetical protein STY1599 1541986 - 1541714 - | hypothetical protein STY1600 1542177 - 1541983 - | hypothetical protein gam 1542805 - 1542275 - | bacteriophage host-nuclease inhibitor protein STY1602 1543102 - 1542833 - | hypothetical protein TERM 2056 1544199 - 1544178 - R 73 -9.5 -3.37796 | gap 1 CGTTATGATTCACAA TCTG-GGCCA GCG TGGCCTCAGA AACATCGACAGCTCT STY1604 1546051 - 1544282 - | hypothetical protein TERM 2057 1545844 - 1545880 + g 100 -7.2 -5.24449 | opp_overlap 1545835, overlap 1545847 1545877 ATATCAGCGCGGCTT CGTCGCGGGT-CAGGGCG CTG CGCCCGGCATCGGCG-CG TTTTTTGCGTTTATC STY1605 1546219 - 1546055 - | hypothetical protein STY1606 1546660 - 1546229 - | hypothetical protein TERM 2058 1546591 - 1546618 + g 100 -17.2 -3.53012 | opp_overlap 1546580 1546596, overlap 1546596 AAAGTTTGGCTTTTC CCAAATGTGCCA ACGT TGGCACATTTGG TTTCAGCGCCGGGGA TERM 2059 1546613 - 1546596 - G 71 -9.9 -3.53012 | opp_overlap 1546591 1546596 TTGGCTTTTCCCAAA TGTGCCA ACGT TGGCACA TTTGGTTTCAGCGCC TERM 2060 1546596 - 1546613 + g 80 -9.9 -4.05788 | opp_overlap 1546596, overlap 1546591 TTGGCTTTTCCCAAA TGTGCCA ACGT TGGCACA TTTGGTTTCAGCGCC STY1607 1546722 - 1547252 + | hypothetical protein TERM 2061 1547351 - 1547384 + F 100 -15.3 -3.90922 | overlap 1547352 1547354 ATTCCTGTGGGGCGA TGGCCAGCCCGGTGT TCGG GTACCGGGCTGGTCG TTCTTTCAAAGCCAT TERM 2062 1547352 - 1547383 + F 100 -16.6 -2.94232 | overlap 1547351 1547354 TTCCTGTGGGGCGAT GGCCAGCCCGGTGT TCGG GTACCGGGCTGGTC GTTCTTTCAAAGCCA TERM 2063 1547354 - 1547381 + F 93 -15.6 -3.02371 | overlap 1547352 1547351 CCTGTGGGGCGATGG CCAGCCCGGTGT TCGG GTACCGGGCTGG TCGTTCTTTCAAAGC STY1608 1547496 - 1547846 + | hypothetical protein STY1609 1547849 - 1548268 + | hypothetical protein STY1610 1548347 - 1548577 + | hypothetical protein STY1611 1548561 - 1549211 + | putative lipoprotein STY1612 1549208 - 1549534 + | hypothetical protein STY1613 1549534 - 1549845 + | hypothetical protein STY1614 1549845 - 1550390 + | hypothetical protein TERM 2064 1550429 - 1550416 - g 71 -9.5 -3.61178 | overlap 1550417 CGGAGTGATTTTAAA CGCCG CTGG CGGCG GCCCCGAAGGGATGA TERM 2065 1550455 - 1550477 + G 74 -7.7 -4.21462 | GATGAGTCCCATGGA CGGGAGGAA TAACC TTGCTCCCG TTTTGCCTGATACCT STY1615 1550387 - 1551982 + | hypothetical protein STY1616 1551982 - 1553478 + | hypothetical protein STY1617 1553459 - 1554280 + | hypothetical protein STY1618 1554283 - 1554741 + | putative bacteriophage protein TERM 2066 1555028 - 1555013 - g 80 -4.6 -5.05782 | overlap 1555015 ATGCACGGCAAAAAA CTGCCG TTCA CGCCAG ACGATCTTGCCGCCT TERM 2067 1555492 - 1555472 - g 72 -2.4 -4.88736 | overlap 1555474 GACGAGGCAGAAAAA GTCCTGCC GGAAT GGCAGCTC AACAGTCTGCGCGAA STY1619 1554956 - 1556071 + | hypothetical protein STY1620 1556086 - 1557039 + | hypothetical protein STY1621 1557049 - 1557387 + | hypothetical protein STY1622 1557389 - 1557835 + | hypothetical protein STY1623 1557835 - 1558299 + | hypothetical protein STY1624 1558296 - 1558550 + | hypothetical protein STY1625 1558540 - 1559967 + | bacteriophage tail sheath protein TERM 2068 1560242 - 1560206 - g 70 -9.5 -3.33261 | overlap 1560207 CGCGAACCCGTACAA GTCGCTGG-CGCTGCAG TGTCG CTCCAGCGTCCAGCG-C TACAGCTCGCAGGGG STY1626 1559967 - 1560488 + | tail core protein STY1627 1560491 - 1560772 + | hypothetical protein TERM 2069 1560780 - 1560793 + F 80 -9.5 -3.99374 | opp_overlap 1560780 CTTGCTGACATCACA GGGGC TCCG GCCCC TTCTTCTTAATCCCC STY1628 1560870 - 1561205 + | hypothetical protein TERM 2070 1561321 - 1561303 - f 78 -11.7 -3.10641 | opp_overlap 1561303, overlap 1561305 CAACGTATCACTTAA CAGCCGC CAGTC GCGGCTG TTCTGCATGGGTTTC TERM 2071 1561303 - 1561321 + F 82 -11.7 -3.38564 | opp_overlap 1561303 1561305 CAACGTATCACTTAA CAGCCGC CAGTC GCGGCTG TTCTGCATGGGTTTC STY1629 1561381 - 1563846 + | putative bacteriophage protein STY1630 1563846 - 1564730 + | hypothetical protein STY1631 1564727 - 1564942 + | putative bacteriophage tail fibre protein TERM 2072 1564971 - 1565001 + G 78 -11.8 -3.17238 | opp_overlap 1564976, overlap 1564973 AGCCACATCAGCGTT AACCAGCGTCAGCG ATG TGCTGACGCCGGTA TTCACTCTGTGGTAT TERM 2073 1564973 - 1564999 + G 91 -14.4 -3.14393 | opp_overlap 1564976, overlap 1564971 CCACATCAGCGTTAA CCAGCGTCAGCG ATG TGCTGACGCCGG TATTCACTCTGTGGT TERM 2074 1564996 - 1564976 - g 76 -12.6 -2.72661 | opp_overlap 1564973 1564971 CATCAGCGTTAACCA GCGTCAGC GATGT GCTGACGC CGGTATTCACTCTGT STY1632 1564930 - 1566084 + | putative bacteriophage regulatory protein TERM 2075 1566100 - 1566082 - g 100 -7.4 -5.59534 | AAGGAGAAGAAAAAA TGACTGGT GTC ACCCGTCA GATCGGTACGGTCAG TERM 2076 1566356 - 1566344 - g 74 -3.3 -4.87665 | GTTCAGTGATAAAAA CGTCC GGG GTACG AAATACGCTGATGGC STY1633 1566081 - 1566608 + | putative bacteriophage baseplate protein STY1634 1566665 - 1567012 + | putative bacteriophage baseplate protein TERM 2077 1567833 - 1567820 - g 70 -6.7 -4.07568 | CCGTGCGGGCTAAAA CACCT GTTC AGGTG GATTACACCATTGAA STY1635 1567003 - 1568106 + | putative bacteriophage baseplate assembly protein STY1636 1568099 - 1568677 + | putative bacteriophage tail fiber protein STY1637 1568680 - 1569705 + | bacteriophage tail fiber protein STY1638 1569707 - 1570219 + | alternative bacteriophage tail fiber C-terminus STY1639 1570219 - 1570836 + | putative bacteriophage tail fiber assembly protein TERM 2078 1570848 - 1570888 + T 72 -10.4 -2.78798 | opp_overlap 1570847 1570848, overlap 1570847 TTGAATATAACTAAG CCGCCCTCACGATATAGT TAAAT GCAATATTGCGGGGGCGG GTTTCACTACCACCT STY1640 1571328 - 1570843 - | alternative bacteriophage tail fiber C-terminus STY1641 1571800 - 1571330 - | alternative bacteriophage tail fiber C-terminus STY1642 1572284 - 1571802 - | alternative bacteriophage tail fiber C-terminus STY1643 1572347 - 1572919 + | DNA-invertase TERM 2079 1573895 - 1573880 - g 75 -3.9 -4.89063 | CGAGCGAAAAATAAA CGCGA TGTAGG CCGCG CCACGCTACTGGCGG TERM 2080 1574109 - 1574122 + G 71 -8.1 -3.85698 | GCTGGACTATCATGG CGGCA GAGG TGCCG TTTCTGGCGGCAGCC STY1645 1573199 - 1574581 + | putative amino acid permease STY1646 1574978 - 1574643 - | hypothetical protein rstA 1575105 - 1575836 + | DNA-binding transcriptional regulator RstA STY1648 1576260 - 1575901 - | hypothetical protein STY1649 1576317 - 1577468 + | outer membrane protein TERM 2081 1577490 - 1577508 + F 100 -17.4 -5.38839 | ATTAATTCTTCTCAA GCCCGCCG TTT CGGCGGGC TTTTCTTTTTCTATC TERM 2082 1578533 - 1578570 + G 83 -7.5 -4.65916 | gap 1 TTCAGCAACCTGATG GCCTTTCGCCCGGCG-CG TGC CGACGACGGGCAACTGGC TTTTCTTGGCCTGGG STY1650 1577621 - 1579327 + | hypothetical protein TERM 2083 1579381 - 1579361 - f 77 -11.1 -3.28791 | opp_overlap 1579362, overlap 1579365 AGCCTGCTTTTATAA CCCACCAGC GGC GCTGACGGG AAATCTTTTCCGTCA TERM 2084 1579407 - 1579365 - f 81 -13.5 -2.59431 | gap 1, opp_overlap 1579362, overlap 1579361 TGCTTTTATAACCCA CCAGCG-GCGCTGACGGGAA ATCT TTTCCGTCAGCGCGCGATAG AGCTAATGTATTGAG TERM 2085 1579701 - 1579735 + G 73 -10.6 -3.33261 | opp_overlap 1579695, overlap 1579703 1579704 TCACTATAAGCTTGA TGCCGCCACCACGCAG CGA CTGCGTGAAGGCGATA TTGTCGCGCTTGACG TERM 2086 1579703 - 1579733 + G 74 -11 -3.23447 | opp_overlap 1579695, overlap 1579701 1579704 ACTATAAGCTTGATG CCGCCACCACGCAG CGA CTGCGTGAAGGCGA TATTGTCGCGCTTGA TERM 2087 1579704 - 1579732 + G 81 -14.5 -2.53747 | opp_overlap 1579695, overlap 1579703 1579701 CTATAAGCTTGATGC CGCCACCACGCAG CGA CTGCGTGAAGGCG ATATTGTCGCGCTTG rstB 1579435 - 1580739 + | sensor protein RstB TERM 2088 1581020 - 1581041 + G 71 -4.4 -4.67607 | opp_overlap 1581010 1581009 AAGAGGCCGAAGCGC TGGCGCTA CGTCAC TATCGCCA TTTGTTTATTCAACA TERM 2089 1581091 - 1581103 + G 73 -6.2 -4.50976 | AGTAAAGCCGCCGTC CGCC TGCCT GGCG TTTTATGCTATCAAG TERM 2090 1581411 - 1581392 - g 100 -7 -5.44119 | overlap 1581393 1581394 GCCAGTTGAAAAAAA GCCTCGCG TCGC CGCGCAGC GTCCCGCCGTGGACG TERM 2091 1581708 - 1581688 - g 71 -11.1 -2.90813 | opp_overlap 1581687 1581688 1581690, overlap 1581685 1581690 CACCGTTTTAAACCA CAGGCGCAG CCG CTGCGACTG ATTATTCCGCGACTG tus 1580815 - 1581744 + | DNA replication terminus site-binding protein fumC 1583144 - 1581741 - | fumarate hydratase TERM 2092 1581827 - 1581851 + g 77 -8.5 -4.07535 | overlap 1581823 1581828 GGTATCCTAATGCCA CGGCTGAGGCT TTG AGCGTCAGCCC TTCTTTATGCGCCTT TERM 2093 1581828 - 1581850 + g 76 -12 -3.03798 | overlap 1581823 1581827 GTATCCTAATGCCAC GGCTGAGGCT TTG AGCGTCAGCC CTTCTTTATGCGCCT TERM 2094 1583286 - 1583311 + r 79 -11.1 -3.33696 | opp_overlap 1583286 1583283 1583278 CAAAATAGCGAATCA TGTTACCGCCC CGCA GGGCGGCGACA TTACTTAACGCAGCG TERM 2095 1583311 - 1583286 - R 74 -11.1 -2.81509 | opp_overlap 1583286, overlap 1583283 1583278 CAAAATAGCGAATCA TGTTACCGCCC CGCA GGGCGGCGACA TTACTTAACGCAGCG fumA 1584958 - 1583312 - | fumarate hydratase class I, aerobic TERM 2096 1584700 - 1584713 + g 70 -6.7 -4.1899 | GCAGGAATTGCAGCG CGACA TATT TGTCG TTTTCACTGGCCTGC TERM 2097 1585377 - 1585357 - g 80 -4.5 -5.093 | opp_overlap 1585375, overlap 1585358 TCGAAAAGAATAAAA CCGCCATGC TGG GCGAAGCGG TAGCCAACCGTTTCG TERM 2098 1585391 - 1585403 + G 74 -6.9 -4.33928 | GGTAGCCAACCGTTT CGGCG AAC TGCCG TTTCTGTTTAAAGTA manA 1585158 - 1586333 + | mannose-6-phosphate isomerase TERM 2099 1586391 - 1586412 + F 100 -13 -4.38116 | overlap 1586388 AGACGTAAAACTCCT CCAGGCGG TTTAAT CCGCCTGG TTTCATTTTTATGGA STY1656 1586436 - 1587944 + | hypothetical protein TERM 2100 1589161 - 1589137 - g 78 -6.5 -4.64844 | gap 1, opp_overlap 1589153 CGCACAGAGAGAAAA TCACCGCGCT GGATTT AGC-CGGTGA TGAGCTTGGCTTTCC add 1588650 - 1589651 + | adenosine deaminase TERM 2101 1589719 - 1589672 - T 81 -12.8 -3.2794 | gap 1 CTTTATTGACACTAA CGCTCTTCTCCGCCTGCGGTT TAATGCT ATCC-CAGGCGGAGAAATGCG ACATCTCAGGCAAGA STY1660 1590765 - 1589725 - | putative oxidoreductase TERM 2102 1590394 - 1590380 - G 82 -5.6 -5.03314 | opp_overlap 1590381, overlap 1590381 TTCAGCGTCAAAAAA TCGCTG TCC CAGCGT CGGTTGTGGAAGACG TERM 2103 1591252 - 1591273 + H 73 -11.5 -2.61695 | overlap 1591251 1591249 CGTTAACCTTTCGCC CCAGGCGCC ATGT GGCGCCTGA CTCTTTACCGGTAAG TERM 2104 1591305 - 1591332 + H 79 -2.6 -5.3472 | overlap 1591306 ATATTCCCTTTTTAC CTGCACCCCTGA CCTC TCACTGGTGCAA TTTTGTTTATTTTTT STY1661 1591397 - 1591612 + | oriC-binding nucleoid-associated protein STY1662 1591701 - 1592141 + | hypothetical protein TERM 2105 1592633 - 1592645 + G 77 -4.7 -4.90869 | overlap 1592615 CGCTGTACGGATTTT CCGCC GCC GTCGG TTTTTCATTAGTGAT TERM 2106 1592695 - 1592714 + G 71 -6.3 -4.30576 | overlap 1592697 CGCGAACGCCTTGCC GTGGCGG ATGTGC CCGCCCC TTTTCGTGGTAACGC STY1663 1592218 - 1592799 + | Na(+)-translocating NADH-quinone reductase subunit E STY1664 1592799 - 1593377 + | electron transport complex protein RnfB TERM 2107 1593466 - 1593495 + G 77 -7.7 -4.37211 | opp_overlap 1593459 1593460, overlap 1593460 1593467 CAGTCAAACGGCACG CCGCTGCGCCAGG TGCC TTTGGCGCCGCGC TTTGTTATCCCTTTA TERM 2108 1593467 - 1593494 + G 74 -11.2 -3.21242 | opp_overlap 1593459 1593460, overlap 1593460 1593466 AGTCAAACGGCACGC CGCTGCGCCAGG TGCC TTTGGCGCCGCG CTTTGTTATCCCTTT TERM 2109 1593529 - 1593514 - g 70 -6.8 -4.08767 | GTTATCCCTTTAAAA CAGCAC ATTG GCGCTG AGGGCGAGCTGTGCG TERM 2110 1594745 - 1594723 - g 76 -3.2 -5.06816 | AGGCTTGAAGAAAAA CGCGCCGCCG AAG CCAAAGCGCG TTTTGAGGCTCGTCA TERM 2111 1595371 - 1595359 - g 93 -4.7 -5.47218 | GTTCAGGCAAAAAAA GCAGC ACA GCAGC AGGTTGTTAACGAGG STY1665 1593370 - 1595391 + | electron transport complex protein RnfC TERM 2112 1595489 - 1595502 + G 90 -5.9 -5.26875 | overlap 1595472 CTCTGCCGGGGATTG CCGCG CAGA CGTGG TTTTTTGGTTGGGGA TERM 2113 1596118 - 1596106 - g 71 -4.8 -4.56597 | CTGCTGTGGCAAAAA GCCA TCCGC TGGC ATATCCCGGTCAGTT TERM 2114 1596143 - 1596162 + G 74 -11.4 -3.2352 | gap 1, overlap 1596138 TCAGTTTTCTGCTCA CGCTGGCGC TAT GCGCC-GCG TTAGGTTGGCTTTTC rnfD 1595392 - 1596450 + | electron transport complex protein RnfD STY1667 1596454 - 1597074 + | electron transport complex protein RnfG TERM 2115 1597752 - 1597713 - g 100 -12.1 -4.54301 | gap 1, overlap 1597715 GAAAAAATGAAGAAA CGCCGCGCCGAAACCGCG CCTTC CGCTGTTCCGGC-CGGTG AAACAGGGAAAGTCT TERM 2116 1597750 - 1597715 - g 78 -13.3 -2.55644 | gap 1, overlap 1597713 AAAAATGAAGAAACG CCGCGCCGAAACCGCG CCTTC CGCTGTTCCGGC-CGG TGAAACAGGGAAAGT ydgQ 1597077 - 1597769 + | SoxR-reducing system protein RsxE TERM 2117 1597827 - 1597785 - g 77 -4.1 -5.09521 | gap 1, overlap 1597794 TGAACAAAGCAAAAA GGCTGGAAATT-CTGACGCG CCTG CGCGACAGCAATCCGCACCC CACAACGGAACTCAA nth 1597769 - 1598404 + | endonuclease III TERM 2118 1599046 - 1599026 - g 91 -4 -5.64421 | opp_overlap 1599030 1599036, overlap 1599030 1599031 1599037 ACTGCAAACAAAAAA CCAACTGA AAGCG TCAGTTTG AACGCTTTCAAACAA TERM 2119 1599057 - 1599030 - g 77 -8.6 -4.07772 | gap 1, opp_overlap 1599030 1599036 1599046 1599049, overlap 1599026 1599031 1599037 CAAACAAAAAACCAA CTGAAAGCG-TCA GTT TGAACGCTTTCAA ACAACCGAAGGCGTT tppB 1599005 - 1600510 + | putative tripeptide transporter permease TERM 2120 1600498 - 1600487 - f 74 -5.8 -4.59109 | GATACCGCTGAAAAA GGCT CTAA AGCC GCTACAGTTTAATTT TERM 2121 1600533 - 1600555 + F 100 -13.5 -6.17184 | opp_overlap 1600529 GGAAACAACATTCAG GCCGCTAAC TGTGC GTTAGCGGC TTTTTTTTTGCTCGT gst 1600615 - 1601220 + | glutathionine S-transferase pdxY 1601909 - 1601223 - | pyridoxamine kinase TERM 2122 1601957 - 1601932 - R 80 -6.1 -4.87626 | opp_overlap 1601933 1601935, overlap 1601935 CCTGAACATCAAAAA TAAGGGAGTGA TTTC TCACTCCCTGT TACTTAATGCCTTAT TERM 2123 1601933 - 1601956 + r 73 -9.6 -3.41581 | opp_overlap 1601932 1601935, overlap 1601935 CTGAACATCAAAAAT AAGGGAGTGA TTTC TCACTCCCTG TTACTTAATGCCTTA TERM 2124 1601935 - 1601954 + r 81 -12.2 -3.27297 | opp_overlap 1601932 1601935, overlap 1601933 GAACATCAAAAATAA GGGAGTGA TTTC TCACTCCC TGTTACTTAATGCCT TERM 2125 1601954 - 1601935 - R 100 -12.2 -4.53398 | opp_overlap 1601935 1601933, overlap 1601932 GAACATCAAAAATAA GGGAGTGA TTTC TCACTCCC TGTTACTTAATGCCT tyrS 1603243 - 1601969 - | tyrosyl-tRNA synthetase TERM 2126 1602146 - 1602178 + g 72 -4 -4.81249 | overlap 1602157 TGACGGCTGGAGTTC GGCGTCTACCAG CGCCTGCAT CAGGTCGGCGCC TTTTTCCATTTCAAC TERM 2127 1602353 - 1602368 + g 81 -3.9 -5.21506 | overlap 1602348 1602352 TACATACTGCGCGCG CGGCG CTTTAC CGCTG TTTTTATCTTCTTCT TERM 2128 1602659 - 1602679 + g 74 -7.5 -4.15044 | GTCAGAACCGCCAAT CTGTAAGGC AAC GCCGTGCAG TTTATTCAGACAAGC pdxH 1604026 - 1603370 - | pyridoxamine 5'-phosphate oxidase ydhA 1604414 - 1604160 - | putative lipoprotein anmK 1605623 - 1604502 - | anhydro-N-acetylmuramic acid kinase TERM 2129 1605440 - 1605410 - G 75 -6.1 -4.56597 | gap 1, overlap 1605395 1605411 1605412 CCGCCTGTGCAAAAA GCCGGCCTAACTGG GTAT CCAGCT-GGCCGAG TTGCGAGAGCGTAAG TERM 2130 1605439 - 1605411 - G 70 -9.6 -3.33744 | gap 1, overlap 1605395 1605410 1605412 CGCCTGTGCAAAAAG CCGGCCTAACTGG GTAT CCAGCT-GGCCGA GTTGCGAGAGCGTAA slyB 1605896 - 1606363 + | outer membrane lipoprotein SlyB precursor slyA 1606845 - 1606411 - | transcriptional regulator SlyA STY1679 1607046 - 1607282 + | hypothetical protein TERM 2131 1608047 - 1608023 - g 80 -10.7 -3.83026 | GTGCCCGATATCAAA CCCAACGTACC GTG GGTACGTCTGG CGCAACGCGTACCGG STY1680 1607276 - 1608145 + | putative HlyD-family protein TERM 2132 1609461 - 1609471 + G 76 -5.4 -4.77757 | AATCACCGATCTGTG GCAA TTC TTGC TTTTCCTTTTTCCGC STY1681 1608145 - 1610184 + | hypothetical protein sodC 1610681 - 1610160 - | superoxide dismutase STY1683 1611657 - 1610761 - | putative oxidoreductase TERM 2133 1611201 - 1611189 - G 80 -9.1 -4.208 | opp_overlap 1611187 1611189 1611199 GCGTAAAATTAGAAA CGCCA AAA TGGCG CACTTTGCCGCTTTG STY1684 1611947 - 1611708 - | hypothetical protein TERM 2134 1612085 - 1612107 + G 71 -7.6 -4.03234 | opp_overlap 1612085, overlap 1612086 TGATACCCGCGAACA TCTGCTGGCC ACC GGCGAGCAGC TTTGTATGCAACGGG TERM 2135 1612086 - 1612106 + G 72 -11.1 -3.01726 | opp_overlap 1612085, overlap 1612085 GATACCCGCGAACAT CTGCTGGCC ACC GGCGAGCAG CTTTGTATGCAACGG STY1685 1612050 - 1612649 + | TetR family transcriptional regulator TERM 2136 1612636 - 1612655 + F 83 -4.2 -5.41941 | AGACCATCATTGCAA CGCCTG AGCAGTAA CGGGCG TTTTTATTTCCTTTA nemA 1612708 - 1613805 + | N-ethylmaleimide reductase gloA 1613874 - 1614281 + | glyoxalase I TERM 2137 1614287 - 1614314 + F 100 -14.8 -4.2828 | opp_overlap 1614282, overlap 1614290 GGGTAACTGATCCCC CGCCGGGCGCAG GTCA CTGCGCCCGTTG TTTTACTGCATCCCG TERM 2138 1614290 - 1614311 + F 100 -17.3 -4.26327 | opp_overlap 1614282, overlap 1614287 TAACTGATCCCCCGC CGGGCGCAG GTCA CTGCGCCCG TTGTTTTACTGCATC TERM 2139 1614405 - 1614419 + G 75 -7.1 -4.45077 | TAACGCTCAACTTTC CGGTC TGTGC GACCG TTTTCGTGGTTTTTA TERM 2140 1614950 - 1614960 + G 75 -6.8 -4.40804 | overlap 1614920 ATGATACCGAGCGGA CAGC GGT GCTG TTTTGTGAAATCGTC rnt 1614382 - 1615029 + | ribonuclease T TERM 2141 1615090 - 1615073 - T 100 -11.3 -5.0133 | opp_overlap 1615073 GATGGCGGTAAAAAA GCGACCT TTAC AGGTCGC TTTCCCCTTTCACAG TERM 2142 1615073 - 1615090 + T 86 -11.3 -3.71649 | opp_overlap 1615073 GATGGCGGTAAAAAA GCGACCT TTAC AGGTCGC TTTCCCCTTTCACAG ydhD 1615454 - 1615107 - | hypothetical protein TERM 2143 1615413 - 1615432 + g 91 -7.9 -5.1101 | CAGGAGAATCGGGTT TTCAGCG ATCTGG CGCTGAA TTTTTTCGATAGTGG TERM 2144 1615636 - 1615650 + H 86 -4.3 -5.51402 | TAACGCGTTCGTGTT TAGCA TTAAT TGCTA TTTTTTTACATCTGT STY1690 1615756 - 1616610 + | putative secreted protein TERM 2145 1616643 - 1616613 - f 70 -9.8 -3.05066 | opp_overlap 1616614 1616615 AACAATTCGCTAATA TTTTATCCTGTCGT TTA ACGACAGGATAACT TCTTCTTTTGCGCCA TERM 2146 1616614 - 1616642 + F 95 -13.3 -4.20868 | opp_overlap 1616613, overlap 1616615 ACAATTCGCTAATAT TTTATCCTGTCGT TTA ACGACAGGATAAC TTCTTCTTTTGCGCC TERM 2147 1616615 - 1616641 + F 100 -16.8 -3.11798 | opp_overlap 1616613, overlap 1616614 CAATTCGCTAATATT TTATCCTGTCGT TTA ACGACAGGATAA CTTCTTCTTTTGCGC sodB 1616737 - 1617318 + | superoxide dismutase TERM 2148 1617328 - 1617349 + F 100 -14.5 -4.07885 | opp_overlap 1617320 1617319 GCATAAGTCTGAGTA CGCAGAAGG TACG CCTTCTGCG TTTTAGAGAGGGATA TERM 2149 1617883 - 1617859 - g 81 -7.1 -4.79174 | overlap 1617854 1617880 ACGTAATCAACAAAA CGCGTTTTGTC GCT GAAGAAACGCG TAACGCGGTCTGGGC TERM 2150 1617890 - 1617880 - g 77 -8.2 -4.15044 | overlap 1617859 TTGTCGCTGAAGAAA CGCG TAA CGCG GTCTGGGCGGCAATT purR 1617786 - 1618811 + | DNA-binding transcriptional repressor PurR ydhB 1619740 - 1618808 - | putative DNA-binding transcriptional regulator TERM 2151 1619987 - 1619999 + G 70 -3.3 -4.69027 | opp_overlap 1619966 1619965, overlap 1619995 CGCCGCTGTCAGCGC CAGCC TAA GCCTG TTTTTAGCTGGCTTT TERM 2152 1620153 - 1620130 - g 73 -8.8 -3.85698 | gap 1, opp_overlap 1620129 1620130 1620142 1620143 TGCTGTGGGTAGAAA GC-GCGGCAGC ACT GCTGACGCTGC GCTTTGTGCAGGCCG TERM 2153 1620658 - 1620645 - g 70 -3.1 -4.82901 | GCGGCGCTACAAAAA TGGCA GGGC TACCA ATTGCTTCCGTGGCT TERM 2154 1621019 - 1620988 - g 70 -5.2 -4.4009 | gap 1, opp_overlap 1620988, overlap 1620990 CGTTAGGTTACAAAA TGCAGTCTCA-TGCA GAT TGCGCTGAGACTGGA TTTCCCCATGCCAAT ydhC 1619853 - 1621058 + | inner membrane transport protein YdhC cfa 1621347 - 1622495 + | cyclopropane fatty acyl phospholipid synthase TERM 2155 1622493 - 1622529 + T 74 -6.8 -4.27316 | gap 2, opp_overlap 1622499, overlap 1622497 1622500 1622501 CTGCGCGTTCCTCGC TAATCATCTCCCCCGCAT TTC ATGCGGGGGA-ATC-TTA TTTTCCGTTAGCCAA TERM 2156 1622497 - 1622526 + T 87 -10.1 -4.25859 | gap 1, opp_overlap 1622499, overlap 1622493 1622500 1622501 GCGTTCCTCGCTAAT CATCTCCCCCGCAT TTC ATGCGGGGGA-ATC TTATTTTCCGTTAGC TERM 2157 1622525 - 1622499 - T 81 -13 -2.70932 | opp_overlap 1622497 1622493 1622500 1622501 GTTCCTCGCTAATCA TCTCCCCCGCAT TTC ATGCGGGGGAAT CTTATTTTCCGTTAG TERM 2158 1622500 - 1622524 + T 100 -14.3 -3.72228 | opp_overlap 1622499, overlap 1622497 1622493 1622501 TTCCTCGCTAATCAT CTCCCCCGCAT TTC ATGCGGGGGAA TCTTATTTTCCGTTA TERM 2159 1622501 - 1622523 + T 100 -17.8 -2.82253 | opp_overlap 1622499, overlap 1622500 1622497 1622493 TCCTCGCTAATCATC TCCCCCGCAT TTC ATGCGGGGGA ATCTTATTTTCCGTT ribE 1623178 - 1622537 - | riboflavin synthase subunit alpha TERM 2160 1623337 - 1623353 + H 85 -7.2 -4.946 | overlap 1623351 CTGCTATTTCTTTTG GCTGCC ACTAC GGCGGC TTTTTAGTCTTTCAT TERM 2161 1623554 - 1623566 + G 77 -4.8 -4.93877 | ATCGGCACCTCTATC TGGC TTCCC GCCA TTTTGTTTGGTCACG TERM 2162 1623780 - 1623818 + G 100 -10.2 -4.88918 | overlap 1623782 CCGATAAAGCCGTGG GTTATCTTCGCGCGCTGC TGT GGGGCGCGCCAGGATACC TTTTCTTTCAGGTAG TERM 2163 1624083 - 1624070 - g 74 -3.1 -4.86621 | ATTCGTAATGAAAAA GGCTT TGGC AAACC TGATAGCGTCGTCAT ydhE 1623395 - 1624768 + | multidrug efflux protein TERM 2164 1624777 - 1624796 + T 100 -10 -5.04987 | opp_overlap 1624771 1624769 1624779 GCGATAATACGACGA TAGCCGTC GCAT GGCGGCTA TTTTTTCGACATGTT ssaU 1626299 - 1625241 - | secretion system apparatus protein SsaU TERM 2165 1625373 - 1625358 - G 71 -4.7 -4.63089 | CACTTCAAAAAATAA TGAGC GGGCCA GCTCA ACATTTTCAACAACG ssaT 1627075 - 1626296 - | putative type III secretion protein TERM 2166 1626698 - 1626683 - G 79 -3.2 -5.1383 | overlap 1626684 AATAACACACAAAAA CTGGCT GAAA AGCAAG CCAAAAAGTGAGGTT ssaS 1627342 - 1627076 - | putative type III secretion protein yscR 1627986 - 1627339 - | type III secretion system protein ssaQ 1629022 - 1628054 - | type III secretion system protein ssaP 1629377 - 1629003 - | putative type III secretion protein ssaO 1629735 - 1629358 - | putative type III secretion protein TERM 2167 1629579 - 1629557 - G 79 -7.8 -4.46854 | TTATCCAACAATAAA TGACAAGATA ACG TACCTTGCCA GCCCATTAATTCTTT ssaN 1631039 - 1629738 - | type III secretion system ATPase ssaV 1633074 - 1631029 - | secretion system apparatus protein SsaV TERM 2168 1631960 - 1631950 - G 90 -5.4 -5.27938 | ATCCTCAAATAAAAA CCAT CTC ATGG CATCAATATCACGAA TERM 2169 1632244 - 1632258 + g 82 -11.4 -3.85698 | overlap 1632239 AGAACTCAACTCTGT CGCCAG GTT CTGGCG TTTCTCACCCGGAAC ssaM 1633427 - 1633059 - | putative pathogenicity island protein ssaL 1634477 - 1633485 - | putative secretion system protein TERM 2170 1634071 - 1634087 + g 100 -7.3 -6.04324 | overlap 1634072 GTAAGCGTATCCAGT TGCGATT GCA AATCGCG TTTTTTCTTTTTTGA TERM 2171 1634072 - 1634086 + g 77 -8.6 -4.18934 | overlap 1634071 TAAGCGTATCCAGTT GCGATT GCA AATCGC GTTTTTTCTTTTTTG STY1709 1635141 - 1634467 - | putative pathogenicity island protein STY1710 1635686 - 1635138 - | putative pathogenicity island protein TERM 2172 1635279 - 1635289 + g 70 -6.8 -4.21631 | overlap 1635285 AATGGCGGTACCGAT CTGC AAT GCAG TTTGTTGCATCACTT ssaJ 1636453 - 1635704 - | putative pathogenicity island lipoprotein ssaI 1636698 - 1636450 - | putative pathogenicity island protein ssaH 1636937 - 1636710 - | putative pathogenicity island protein ssaG 1637193 - 1636978 - | putative pathogenicity island protein sseG 1637976 - 1637287 - | putative pathogenicity island effector protein TERM 2173 1637590 - 1637580 - G 85 -2.4 -5.49569 | TAGCAATATAAAAAA CGGC ATT GCCT ATACTGTCGTGAGCC sseF 1638755 - 1637973 - | putative pathogenicity island effector protein TERM 2174 1638738 - 1638761 + g 73 -9 -3.90464 | opp_overlap 1638743, overlap 1638734 1638743 ATTGCTTGCCGCTGA CGGAATATGA ATTT TCATATTTCG TTCTGTTATTTAAGC sscB 1639205 - 1638771 - | putative pathogenicity island protein sseE 1639673 - 1639257 - | putative pathogenicity island effector protein sseD 1640263 - 1639676 - | putative pathogenicity island effector protein TERM 2175 1640090 - 1640111 + g 91 -9.5 -4.57569 | gap 1, overlap 1640110 TTTTTCTACGTTATA GCTGCGC-AT GAT ATCGCGCAGC TTTTTGGCAAGCTCC sseC 1641733 - 1640279 - | putative pathogenicity island effector protein TERM 2176 1641720 - 1641732 + g 74 -4.9 -4.69664 | CTATCGCTATTACTG TGAAT TCG ATTCA TTTTTAGCTCCTGTC sscA 1642209 - 1641736 - | putative Type III secretion system chaperone protein TERM 2177 1642053 - 1642041 - G 74 -4.7 -4.7629 | opp_overlap 1642044 TCAGCAATTGAAAAA GTCGC GCT GCGCC GGCGAATTCTTTTAC sseB 1642796 - 1642206 - | putative pathogenicity island effector effector protein TERM 2178 1642459 - 1642435 - G 81 -12.3 -3.524 | TATTTAGCCATATAA TCATCAATGGT CAT ACCATCGATGA GAATACCATTATCAC TERM 2179 1642708 - 1642743 + g 73 -5.4 -4.57073 | gap 1, overlap 1642710 TGGGATAAGTCATCC TGGCTCCCGGTATCAGC GTT GCTGACGCC-GAAGCTA TTTTTAAACACAATA sseA 1643129 - 1642803 - | putative pathogenicity island protein ssaE 1643574 - 1643332 - | putative secretion system protein ssaD 1644793 - 1643582 - | putative pathogenicity island protein TERM 2180 1643759 - 1643747 - G 73 -9.1 -3.86897 | overlap 1643727 GCGACTCTGTACAAA GCCAG CCA CTGGC GCAGGCAGATACTTG spiA 1646267 - 1644774 - | putative outer membrane secretory protein spiC 1646652 - 1646269 - | putative pathogenicity island 2 secreted effector protein TERM 2181 1647460 - 1647474 + G 77 -4.2 -4.89477 | opp_overlap 1647460 TATCGATGAAAAAAG CTTTCG TCG CGATAG TTTTATTCTTAACCA TERM 2182 1649024 - 1649035 + G 85 -4.4 -5.19879 | opp_overlap 1649018, overlap 1649018 CAGCAAAATGCGCTT CTCA ACGC TGAG TTTTTGTATTTCCCC ssrA 1647071 - 1649833 + | putative two-component sensor kinase ssrB 1649864 - 1650502 + | putative two-component response regulator STY1730 1650681 - 1651409 + | putative transcriptional regulator STY1731 1651581 - 1652540 + | putative pathogenicity island protein ydhZ 1652848 - 1652636 - | hypothetical protein TERM 2183 1652925 - 1652910 - R 78 -4.8 -4.99947 | CTCAATTAAACAAAA TTTGAT GCAA ATCAAA GAAATAACGCAGTTT ttrR 1653566 - 1652946 - | putative two-component response regulator TERM 2184 1652972 - 1652989 + g 91 -7.7 -5.00616 | ACGTTGTTCGTATTC TGGTCTC TGGC GAGGCCA TTTTTTCGAAACGCC TERM 2185 1653236 - 1653260 + g 87 -8.5 -4.57073 | overlap 1653223 1653233 CACGCTCCAGCGCCG CCTGTAGCGGT TTT ACCGATACCGG TTTTTGCAGAAAATC TERM 2186 1653970 - 1653950 - H 79 -10.5 -3.54543 | AGTCACTGTCGGAAA TTGTTGCGC CAT ACGCAACAA TTGCCAGACATGATC TERM 2187 1655712 - 1655701 - g 74 -7.2 -4.21922 | opp_overlap 1655700 1655701 CTATTGAAAACCAAA CGCC GCAG GGCG CGTTTCGTACGACCG TERM 2188 1655901 - 1655886 - g 71 -6 -4.30719 | opp_overlap 1655890 1655893 1655900 GTGGTGGATAACAAA CGCTGC GTCG GCTGCG CCTATTGTGTCCAGG ttrB 1655478 - 1656230 + | tetrathionate reductase subunit B TERM 2189 1656746 - 1656758 + G 70 -9.1 -3.63991 | GGCGATGTTTCTTAG CGCCT TAC AGGCG TTCTTCGCGCTGATG ttrC 1656231 - 1657253 + | tetrathionate reductase subunit C membrane protein TERM 2190 1659006 - 1658993 - g 75 -6.7 -4.39828 | overlap 1658982 AATACCGCGACAAAA TTGCC GGCG GGCAA TCCCCTTATCCAGCC TERM 2191 1659350 - 1659322 - g 70 -8.7 -3.76224 | opp_overlap 1659329 1659342 GGCGTAGCCAGTAAA GCCACTACCGCCC GCT GGCCGGTTGTCGC CCCCGCCACTCACCG ttrA 1657246 - 1660308 + | tetrathionate reductase subunit A TERM 2192 1662551 - 1662575 + G 80 -9.4 -4.08216 | opp_overlap 1662553 TTTCTGCAATGGGAA CATTACGCCA CCTTC TGGTGTAATG TTTTACACACAATAA STY1741 1661861 - 1662598 + | hypothetical protein TERM 2193 1663297 - 1663324 + F 84 -8.4 -4.59109 | gap 1, opp_overlap 1663296 1663294 1663297 1663320 GCATGAAGAAAATAT CGCGCCCTGCCTC GCA GAGGTAAG-CGCG TTTTTACGCGATCTG STY1743 1663367 - 1664710 + | putative amino acid permease TERM 2194 1664741 - 1664716 - f 83 -14.1 -2.64616 | overlap 1664728 1664731 GCTCGATTGACATTA TGCGCAACAAC ACCA GCTGTTGCGCA ACGCCGCCCCTGTTC pykF 1665112 - 1666524 + | pyruvate kinase TERM 2195 1666550 - 1666578 + F 100 -14.8 -3.76224 | opp_overlap 1666557, overlap 1666557 GTGAATTAATTTGTT TAAAAAAGCGCC CTTCC GGCGCTTTTTTA TTTAATCGATAGCCA TERM 2196 1666557 - 1666571 + F 100 -8.5 -5.68438 | opp_overlap 1666557, overlap 1666550 AATTTGTTTAAAAAA GCGCC CTTCC GGCGC TTTTTTATTTAATCG TERM 2197 1666571 - 1666557 - f 91 -8.5 -5.01732 | opp_overlap 1666557 1666550 AATTTGTTTAAAAAA GCGCC CTTCC GGCGC TTTTTTATTTAATCG TERM 2198 1666654 - 1666681 + F 72 -2.6 -5.03747 | TTATCTAAGAAGAAT CCGATGGAAGCC CCCT GTTTTCTTTCGG TTTTTTAGGGACTTT lppA 1666834 - 1667070 + | major outer membrane lipoprotein TERM 2199 1667080 - 1667120 + F 100 -17.1 -2.87132 | opp_overlap 1667062 1667091, overlap 1667091 AAGTAATAGTACCTG CGTAATAAAAATGGCGCAC ATC GTGCGCCATTTTTTTTACC TATATAACCACACAA TERM 2200 1667091 - 1667109 + F 100 -14.6 -5.83822 | opp_overlap 1667091, overlap 1667080 CCTGCGTAATAAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTTACCTATA TERM 2201 1667109 - 1667091 - f 100 -14.6 -5.06414 | opp_overlap 1667091 1667080 CCTGCGTAATAAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTTACCTATA lppB 1667153 - 1667392 + | major outer membrane lipoprotein TERM 2202 1667435 - 1667407 - T 87 -14.7 -2.80935 | opp_overlap 1667412, overlap 1667412 ATTTGACGCATGATA TAAAATGGCGCAC ATC GTGCGCCATTTTT TTGTCCGTCATTTAC TERM 2203 1667412 - 1667430 + T 100 -14.6 -5.64274 | opp_overlap 1667407 1667412 ACGCATGATATAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTGTCCGTCA TERM 2204 1667430 - 1667412 - T 100 -14.6 -4.57755 | opp_overlap 1667412, overlap 1667407 ACGCATGATATAAAA TGGCGCAC ATC GTGCGCCA TTTTTTTGTCCGTCA TERM 2205 1668560 - 1668536 - T 72 -9.3 -3.60952 | overlap 1668534 1668558 1668559 GAACAACAAAATATA CGCTCTGTCCA CTC TGGATAAAGCG ACGTCGCCGTCCGAC STY1749 1669030 - 1668614 - | cysteine desufuration protein SufE TERM 2206 1668692 - 1668705 + g 74 -2.3 -5.0133 | overlap 1668688 AGAAGGTGTGAGGTG TTGCG TAAG CGCCA TTTTTTCGAACCATG STY1750 1670263 - 1669043 - | selenocysteine lyase TERM 2207 1669470 - 1669446 - G 74 -7.8 -4.07568 | gap 1, opp_overlap 1669446 GTTCCCGCCTCAAAA CGCCA-GGGCG CTTT CGCCCATGTCG TTCCCTGCGTCAGGC TERM 2208 1669635 - 1669611 - G 77 -4.9 -4.89729 | overlap 1669613 GAGAAAACGTAAAAA TCGCAGTCCAG CGC CTGGACGTCAA CAGCATGGTGCATCA TERM 2209 1670221 - 1670242 + g 72 -3.7 -4.82901 | TAACTTCACGCTGCA GTATGGG AAAATCCG CCCGTAC TTTTTCTACAGGAAA TERM 2210 1670277 - 1670308 + r 77 -10.8 -3.34715 | gap 1, opp_overlap 1670268, overlap 1670275 ATACCAGGCCTCCGG GCAGTCGCTGGC-CG ATT CGCGCCAGCACCTGC TGTTTAAGGGCGCTA STY1751 1671531 - 1670260 - | cysteine desulfurase activator complex subunit SufD TERM 2211 1670637 - 1670655 + gr 75 -6.6 -4.46073 | TGGTCTTGTGCAACT GGCGGCTG TTA CAGTAGCC TTTGTTATGTTCCAG sufC 1672252 - 1671506 - | cysteine desulfurase ATPase component TERM 2212 1672101 - 1672131 + g 70 -6.9 -4.07687 | gap 2, overlap 1672102 1672104 GTGACCTCATAATCT TCACG-TC-CCGCCA GGG TGGCGGAGAGCGTGC TTTTCCCGGAACCGT STY1753 1673756 - 1672269 - | cysteine desulfurase activator complex subunit SufB sufA 1674133 - 1673765 - | iron-sulfur cluster assembly scaffold protein TERM 2213 1674739 - 1674726 - g 70 -5.3 -4.40894 | CAAATCACACTAAAA CCATT ATCG AATGG TACAGCATCGTCGGC STY1755 1674560 - 1675906 + | putative transporter TERM 2214 1675963 - 1675933 - T 100 -12.7 -5.45802 | CCCGGAAAAGAAAAA CCCTTAAGTCTGT TCAAT ACAGGCTTAAGGG TTCCGGCCCCATCCG STY1756 1676421 - 1676194 - | hypothetical protein STY1757 1676873 - 1676481 - | hypothetical protein STY1758 1679944 - 1676888 - | FAD-binding protein TERM 2215 1677698 - 1677709 + g 76 -3 -5.01732 | CAGAGGTAAATCCAC CATA CCGA TATG TTTTTTCGCCAGATT TERM 2216 1678354 - 1678369 + g 80 -4.6 -5.07652 | GGTTAAGTCGATTAT GCGGAT CAAA AGCCGC TTTTATTTTGCGCAG TERM 2217 1679539 - 1679526 - G 81 -2.3 -5.40072 | TCCGGCGCAAAAAAA TAGCC ATAC GGCTT TAACGCTTGATTAAG STY1759 1680209 - 1681327 + | putative inner membrane protein TERM 2218 1681330 - 1681356 + F 100 -15.8 -3.56862 | opp_overlap 1681329 1681328, overlap 1681320 1681331 1681333 CAAGCAGTCATAATC CCGTCGGGCGGC ATT GCCGCCCGATGC TTTAGCGACGTTTAT TERM 2219 1681331 - 1681355 + F 100 -19.3 -2.73635 | opp_overlap 1681329 1681328, overlap 1681330 1681320 1681333 AAGCAGTCATAATCC CGTCGGGCGGC ATT GCCGCCCGATG CTTTAGCGACGTTTA TERM 2220 1681333 - 1681353 + F 100 -18.3 -2.90992 | opp_overlap 1681329 1681328, overlap 1681331 1681330 1681320 GCAGTCATAATCCCG TCGGGCGGC ATT GCCGCCCGA TGCTTTAGCGACGTT TERM 2221 1681588 - 1681607 + F 100 -7.1 -6.47228 | CTGTGTGTAGTCTTT GCCCGTC TCCTAC GATGGGC TTTTTTTTTTACTTC aroD 1681680 - 1682438 + | 3-dehydroquinate dehydratase TERM 2222 1682517 - 1682469 - T 70 -10.4 -2.52464 | gap 1, opp_overlap 1682483 1682501 GCGTCGGGCAACTTA CGCCCTATCCGGCCGACACAACA TGTT TCTTGTGCAGGCCGGATAAG-CA TAGCGTTATCTGGTC ppsA 1684916 - 1682538 - | phosphoenolpyruvate synthase TERM 2223 1683076 - 1683058 - G 74 -7.4 -4.19746 | TCCAGCGCAAAACAA TCGCGGAA ACT TTCTGCGA CGTAACGACCCGCGC TERM 2224 1683473 - 1683499 + g 83 -7.2 -4.62336 | TGACCTTCAGCGGTA GCTCTGGCATGG TAT CTACGCTGGAGC TTTTTACGCTGAAAT STY1762 1685253 - 1686086 + | hypothetical protein TERM 2225 1687068 - 1687058 - g 71 -4.6 -4.62471 | GGCAACTGTCAAAAA CAGC ATC GCCG CCAGTTGGACGTATG aroH 1686242 - 1687288 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2226 1687265 - 1687282 + F 79 -8.3 -4.2828 | opp_overlap 1687261 TTGGAAAAACTTGCC GCGGCGG TAGA CAGCCGC TTTTAATAGCTCGCC TERM 2227 1687294 - 1687316 + F 100 -15.6 -4.21631 | opp_overlap 1687291 CCGCTTTTAATAGCT CGCCCATCCT GCC GGGATGGGCG TTTCTTCGATGCGTT STY1764 1687445 - 1687636 + | hypothetical protein STY1765 1689114 - 1687672 - | hypothetical protein TERM 2228 1688209 - 1688223 + g 70 -10 -3.41878 | overlap 1688206 AATAAAAGGGGTTAA CGTCTG CGC CAGACG TTGTAAATTCCACAG TERM 2229 1688419 - 1688385 - G 84 -12.8 -3.35996 | opp_overlap 1688380 1688387, overlap 1688399 TATCCGTATTCATAA CGCCGTGCGAAAAACC GAC GGTTTGCCACTCGGCG ATGAGTCTTCCGGTA STY1766 1689889 - 1689176 - | hypothetical protein TERM 2230 1689583 - 1689566 - G 76 -3.3 -5.05782 | AGCTACTTCAAAAAA CGGAAAG CGCG CTGCCCG GGAAAAAAGTTCGCT TERM 2231 1689994 - 1690005 + r 71 -7.2 -4.04789 | CATTTTTCTTGTTTA CCGG TGAA CCGG TTCCTTTTTTTAACT TERM 2232 1690062 - 1690079 + r 80 -6.9 -4.72986 | opp_overlap 1690063, overlap 1690063 TGTTGTACTTTTAAC AGGGCGT GAGC ACGCCCG TTTTTAATAAAAGTA TERM 2233 1690078 - 1690063 - R 73 -10.4 -3.04144 | opp_overlap 1690062 1690063 GTTGTACTTTTAACA GGGCGT GAGC ACGCCC GTTTTTAATAAAAGT TERM 2234 1690063 - 1690078 + r 77 -10.4 -3.4331 | opp_overlap 1690063, overlap 1690062 GTTGTACTTTTAACA GGGCGT GAGC ACGCCC GTTTTTAATAAAAGT nlpC 1690667 - 1690203 - | putative lipoprotein btuD 1691493 - 1690744 - | vitamin B12-transporter ATPase TERM 2235 1690815 - 1690795 - G 89 -13.3 -3.54424 | GTCGAGTCGTCGAAA GCGCAAACC GTA GGCTTGCGC CAGATAAGAGGGGGT TERM 2236 1691498 - 1691509 + r 70 -2.2 -5.04325 | AATTGAGACATTATT TTGC CAAC GCGA TTTTTATGCTTTCCA btuE 1692044 - 1691493 - | putative glutathione peroxidase btuC 1693116 - 1692136 - | vtamin B12-transporter permease TERM 2237 1693178 - 1693204 + r 83 -13.8 -2.58861 | opp_overlap 1693184, overlap 1693184 TCCTTTACTTGAAAG AAAAAAGGCCGC AAT GCGGCCTTTTTA GTTATACGGGTCATC TERM 2238 1693198 - 1693184 - R 100 -12.8 -5.64421 | opp_overlap 1693178 1693184 ACTTGAAAGAAAAAA GGCCGC AAT GCGGCC TTTTTAGTTATACGG TERM 2239 1693184 - 1693198 + r 100 -12.8 -4.93365 | opp_overlap 1693184, overlap 1693178 ACTTGAAAGAAAAAA GGCCGC AAT GCGGCC TTTTTAGTTATACGG TERM 2240 1693276 - 1693235 - R 95 -11.7 -3.87815 | opp_overlap 1693237 TTTCAGGCTGACAAA TACGCTGTCATCCCG CTGATCTACTTT CGGGATGGCAGCGTA TCTGCCGCAATACAC TERM 2241 1693237 - 1693274 + r 77 -12.1 -2.87564 | opp_overlap 1693235 TCAGGCTGACAAATA CGCTGTCATCCCG CTGATCTACTTT CGGGATGGCAGCG TATCTGCCGCAATAC ihfA 1693618 - 1693319 - | integration host factor subunit alpha pheT 1696010 - 1693623 - | phenylalanyl-tRNA synthetase subunit beta TERM 2242 1695431 - 1695458 + g 83 -9.8 -4.20516 | opp_overlap 1695385, overlap 1695416 TGGTTGCCGTAACCG GCGCCATTTCAG GCTC CTGGAGCGGCGC TTTGTTCAGTACCGC pheS 1697009 - 1696026 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2243 1697105 - 1697073 - R 72 -10.8 -2.89564 | gap 1, opp_overlap 1697081, overlap 1697081 TCTCGATTTCAGATA CA-AAAAAAGCCTCC ATCA GGAGGCTTTTTTACG CTGTTTTTCGTTTCG TERM 2244 1697081 - 1697096 + r 100 -10.4 -5.10077 | opp_overlap 1697081 1697073 TCAGATACAAAAAAA GCCTCC ATCA GGAGGC TTTTTTACGCTGTTT TERM 2245 1697096 - 1697081 - R 100 -10.4 -5.76633 | opp_overlap 1697081, overlap 1697073 TCAGATACAAAAAAA GCCTCC ATCA GGAGGC TTTTTTACGCTGTTT pheM 1697190 - 1697146 - | phenylalanyl-tRNA synthetase operon leader peptide TERM 2246 1697301 - 1697279 - R 100 -12 -4.99568 | opp_overlap 1697281, overlap 1697281 GAACAGTAAATAAAA GAGAGGGAGC CAG GCTCCCTCTT TTCACTGGCTTATGC TERM 2247 1697281 - 1697299 + r 100 -14.6 -4.21676 | opp_overlap 1697279 1697281 ACAGTAAATAAAAGA GAGGGAGC CAG GCTCCCTC TTTTCACTGGCTTAT TERM 2248 1697299 - 1697281 - R 100 -14.6 -4.09862 | opp_overlap 1697281, overlap 1697279 ACAGTAAATAAAAGA GAGGGAGC CAG GCTCCCTC TTTTCACTGGCTTAT rplT 1697667 - 1697311 - | 50S ribosomal protein L20 rpmI 1697915 - 1697718 - | 50S ribosomal protein L35 TERM 2249 1697967 - 1697994 + r 72 -8.4 -3.81146 | opp_overlap 1697968 1697969, overlap 1697968 ACATAGGCGAACAAA ACCTGTGAAGCC CGAA GGCTTCACAGAA TTGTTACTTGAAGGC TERM 2250 1697993 - 1697968 - R 100 -14.1 -4.66987 | opp_overlap 1697967 1697968, overlap 1697969 CATAGGCGAACAAAA CCTGTGAAGCC CGAA GGCTTCACAGA ATTGTTACTTGAAGG TERM 2251 1697968 - 1697993 + r 77 -11.9 -2.88366 | opp_overlap 1697968 1697969, overlap 1697967 CATAGGCGAACAAAA CCTGTGAAGCC CGAA GGCTTCACAGA ATTGTTACTTGAAGG TERM 2252 1697992 - 1697969 - R 100 -15.4 -3.39469 | opp_overlap 1697968 1697967, overlap 1697968 ATAGGCGAACAAAAC CTGTGAAGCC CGAA GGCTTCACAG AATTGTTACTTGAAG infC 1698553 - 1698011 - | translation initiation factor IF-3 thrS 1700485 - 1698557 - | threonyl-tRNA synthetase TERM 2253 1699556 - 1699566 + g 74 -2.4 -5.00616 | ATCTTTATAGTTGTC CCAG TGC CCGG TTTTTTCCCACAGCA TERM 2254 1700199 - 1700184 - G 70 -3.2 -4.80882 | overlap 1700186 ACGTCATAGTAAAAA CCGTTG TCGA CAACCG GACCGATCGCCATTT TERM 2255 1700635 - 1700614 - H 72 -10.3 -2.88758 | overlap 1700604 1700616 ACAACCTTCGACACA GACGAAAAT CGCT ATTTTCGTC CGGCATGATGATGGT rfc 1701377 - 1702600 + | O-antigen polymerase TERM 2256 1702632 - 1702598 - T 74 -5.6 -4.67968 | opp_overlap 1702607, overlap 1702601 1702602 1702605 CTAAGAAACAATAAA TAAGTTATACGGCGGC AAT GCCGCCGTTTTATTTG GCTCTGAAGCGTAAA TERM 2257 1702629 - 1702601 - T 77 -7.3 -4.39859 | opp_overlap 1702607, overlap 1702598 1702602 1702605 AGAAACAATAAATAA GTTATACGGCGGC AAT GCCGCCGTTTTAT TTGGCTCTGAAGCGT TERM 2258 1702628 - 1702602 - T 74 -10.8 -3.21475 | opp_overlap 1702607, overlap 1702601 1702598 1702605 GAAACAATAAATAAG TTATACGGCGGC AAT GCCGCCGTTTTA TTTGGCTCTGAAGCG TERM 2259 1702625 - 1702605 - T 79 -12.5 -2.76588 | opp_overlap 1702607, overlap 1702602 1702601 1702598 ACAATAAATAAGTTA TACGGCGGC AAT GCCGCCGTT TTATTTGGCTCTGAA TERM 2260 1702607 - 1702623 + T 100 -15.1 -4.92385 | opp_overlap 1702605 1702602 1702601 1702598 AATAAATAAGTTATA CGGCGGC AAT GCCGCCG TTTTATTTGGCTCTG STY1779a 1703129 - 1702923 - | hypothetical protein TERM 2261 1703192 - 1703171 - R 72 -10.3 -2.88758 | overlap 1703161 1703173 ACAACCTTCGACACA GACGAAAAT CGCT ATTTTCGTC CGGCATGATGATGGT STY1782 1704468 - 1704154 - | hypothetical protein TERM 2262 1704343 - 1704325 - G 76 -10.4 -3.69506 | opp_overlap 1704328, overlap 1704323 1704328 GAGCTCAAAAGAATA CAACATGA TAT TCATGTTG ATACCAAAAAACATC TERM 2263 1704529 - 1704566 + H 77 -9.3 -3.87815 | gap 1, opp_overlap 1704536, overlap 1704530 1704533 1704536 GTTATATTTAAAGGT TTAATAAGCACTGC-GCA TCA TGCTGCTGTGCTTATTAC TTTGTAAAAATAAGA TERM 2264 1704530 - 1704565 + H 79 -12.8 -2.92475 | gap 1, opp_overlap 1704536, overlap 1704529 1704533 1704536 TTATATTTAAAGGTT TAATAAGCACTGC-GCA TCA TGCTGCTGTGCTTATTA CTTTGTAAAAATAAG TERM 2265 1704533 - 1704562 + H 75 -10.1 -3.60798 | gap 1, opp_overlap 1704536, overlap 1704530 1704529 1704536 TATTTAAAGGTTTAA TAAGCACTGC-GCA TCA TGCTGCTGTGCTTA TTACTTTGTAAAAAT TERM 2266 1704536 - 1704559 + H 71 -7.4 -3.93401 | gap 1, opp_overlap 1704536, overlap 1704533 1704530 1704529 TTAAAGGTTTAATAA GCACTGC-GCA TCA TGCTGCTGTGC TTATTACTTTGTAAA TERM 2267 1705085 - 1705067 - g 80 -5.2 -4.84761 | overlap 1705069 1705070 ATAGGCGCAGAAAAA TACCCTGC CTG GCAGGATC AAATTGAAAACCGTT TERM 2268 1705083 - 1705069 - g 71 -7.8 -4.04397 | overlap 1705067 1705070 AGGCGCAGAAAAATA CCCTGC CTG GCAGGA TCAAATTGAAAACCG STY1783 1704611 - 1705570 + | putative outer membrane protein TERM 2269 1705611 - 1705589 - T 100 -17.8 -3.69395 | opp_overlap 1705579 1705585 GTCACCACGGAATAA CCGGGTTACG TAA CGTAACCCGG CGCAATATTACATCT STY1784 1706377 - 1705619 - | putative outer membrane protein TERM 2270 1706244 - 1706254 + g 82 -5.4 -5.03314 | opp_overlap 1706224 1706244 CCCGCATTCAGATTA CCTT CAA AAGG TTTTTTCGCGGTGGA TERM 2271 1706421 - 1706405 - H 89 -6.5 -5.32944 | CGTACAACTAAAAAA GAGACCA CGA CGGTCCC GGAAACTTTCATAGG pfkB 1706666 - 1707598 + | 6-phosphofructokinase 2 TERM 2272 1707626 - 1707600 - f 72 -10.8 -2.76696 | overlap 1707599 TTTCCGCGCAATAAT CGTTTCCCCCTC GCC GAGGGGGATACC GGAAAATCGGTTAAC TERM 2273 1707644 - 1707659 + F 78 -11.8 -3.01791 | AAAATCGGTTAACGG GCGGCG CATC CGCCGC TGTTAAAAACACAGT TERM 2274 1707785 - 1707795 + G 78 -2.4 -5.16237 | CTCAATAACCATCTG ACGC GCA GCGG TTTTTTGCTGACATT TERM 2275 1707921 - 1707893 - g 86 -10.3 -4.10552 | opp_overlap 1707852 1707851 1707892 GCTGATGAAATCAAA GCGCTTGTCGC CGGACTT GCGAAAAGCGC GTTAGATAAGGATGT STY1786 1707695 - 1707985 + | hypothetical protein TERM 2276 1708178 - 1708213 + G 78 -2 -5.15634 | gap 2, opp_overlap 1708162 1708176, overlap 1708163 1708181 GCCAGGCGGAGAAGT TCATG-CCG-CATGGC ATTTAC GTTATGCCGGCCATGA TTTTTTCGTGAAGTG TERM 2277 1708268 - 1708243 - g 77 -8.3 -4.08144 | gap 1, opp_overlap 1708236 1708250, overlap 1708236 1708244 GCGATGAACGAGAAA TGCTTC-GCGGT TTT ACCGCTGAAGCC GATCAGCTGGAGCTG TERM 2278 1708267 - 1708244 - g 76 -11.8 -3.04404 | gap 1, opp_overlap 1708236 1708250, overlap 1708236 1708243 CGATGAACGAGAAAT GCTTC-GCGGT TTT ACCGCTGAAGC CGATCAGCTGGAGCT STY1787 1708092 - 1708952 + | hypothetical protein STY1788 1709531 - 1708995 - | hypothetical protein TERM 2279 1710228 - 1710243 + G 72 -11.8 -2.64099 | opp_overlap 1710225 1710226, overlap 1710227 AATCGCGGCAAAGGC GGCGCG AATG CGCGCC ATTGTGGTGCCAGCA STY1789 1709680 - 1710348 + | 2-deoxyglucose-6-phosphatase TERM 2280 1710507 - 1710519 + G 86 -4.1 -5.36441 | TTTATCATGACGGCG GAAGG ACA TCTTC TTTTTTCTATAGCCA STY1790 1710498 - 1711085 + | hypothetical protein TERM 2281 1711754 - 1711743 - g 75 -5.8 -4.65895 | TTTTGTACCGAAAAA TCCG TTTG CGGA TCTGACTGGCGCAAA STY1791 1711222 - 1712613 + | putative sodium:dicarboxylate symporter TERM 2282 1712677 - 1712707 + T 100 -9.8 -5.84381 | opp_overlap 1712682 AAAATGTCTGTCACT AAAAACGCCGGT CTCCAGT ACCGGCGTTTTG TTTTTTTCTTAGTCA TERM 2283 1712702 - 1712682 - T 93 -9.7 -4.72272 | opp_overlap 1712677 GTCTGTCACTAAAAA CGCCGGT CTCCAGT ACCGGCG TTTTGTTTTTTTCTT cedA 1712958 - 1712716 - | cell division modulator TERM 2284 1713346 - 1713314 - g 70 -9.8 -3.33696 | gap 1 CGGGCGCGCAACCAA CGGCCCCCGGCAGCT TAAA AGC-GCCCGAGACCG CGAATGATAAGCTCA TERM 2285 1714110 - 1714093 - g 74 -3.3 -4.88736 | opp_overlap 1714097, overlap 1714095 1714097 GATGAGTCACAAAAA CTGACCG GTCG CGATCCG GATTTTCACCGCCGG katE 1713175 - 1715427 + | hydroperoxidase II TERM 2286 1715465 - 1715441 - T 93 -9.9 -4.69559 | opp_overlap 1715444, overlap 1715443 1715444 AAACGGCAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 2287 1715463 - 1715443 - T 95 -12.5 -3.94471 | opp_overlap 1715444, overlap 1715441 1715444 ACGGCAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 2288 1715444 - 1715462 + T 100 -16 -4.91109 | opp_overlap 1715443 1715441 1715444 CGGCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 2289 1715462 - 1715444 - T 93 -16 -2.95598 | opp_overlap 1715444, overlap 1715443 1715441 CGGCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 1716002 - 1715544 - | transposase for insertion sequence element IS200 TERM 2290 1716115 - 1716133 + r 100 -16 -4.18018 | opp_overlap 1716105 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 2291 1716173 - 1716152 - R 100 -15.9 -5.4251 | TCCATAGACAAAAAA TGCGGCGCA TTCT TGCGCCGCA AACTCAGGAGCTAAA STY1796 1716942 - 1716184 - | hypothetical protein celF 1718310 - 1716955 - | phospho-beta-glucosidase B TERM 2292 1718322 - 1718338 + r 70 -9.5 -3.10513 | TCATAATATCTCCCT TCAGTGT ATG ACACTGA TATGTATTACGCTAT celD 1719277 - 1718435 - | DNA-binding transcriptional regulator ChbR celC 1719635 - 1719288 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA celB 1721044 - 1719686 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC TERM 2293 1720764 - 1720748 - G 85 -4.3 -5.252 | CATGCCGATAAAAAA TGGCGCC ATG AGCGACA TAATGCCCAATGTGC TERM 2294 1721084 - 1721062 - R 72 -9.2 -3.64192 | opp_overlap 1721064, overlap 1721064 AAAAATACCCTTAAA TACCGCAATA AAA TATTGCGGTT AGTGTATGAAATAAC TERM 2295 1721082 - 1721064 - R 82 -11.8 -3.38603 | opp_overlap 1721064, overlap 1721062 AAATACCCTTAAATA CCGCAATA AAA TATTGCGG TTAGTGTATGAAATA TERM 2296 1721064 - 1721082 + r 82 -11.8 -3.32498 | opp_overlap 1721064 1721062 AAATACCCTTAAATA CCGCAATA AAA TATTGCGG TTAGTGTATGAAATA celA 1721447 - 1721127 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB TERM 2297 1721701 - 1721716 + r 74 -8.2 -3.95817 | opp_overlap 1721701 GCAGGCACAAAAAAA CCGGCT CGCA GGCCGG TTTCCTTGAATGTTC TERM 2298 1721716 - 1721701 - R 100 -7.5 -5.64274 | opp_overlap 1721701 GCAGGCACAAAAAAA CCGGC TCGCAG GCCGG TTTCCTTGAATGTTC osmE 1722089 - 1721748 - | DNA-binding transcriptional activator OsmE nadE 1722307 - 1723134 + | NAD synthetase STY1804 1723228 - 1724136 + | nucleotide excision repair endonuclease TERM 2299 1724191 - 1724143 - T 100 -11.7 -5.0065 | opp_overlap 1724143 1724183 CAGTCATAAAGAAAA CCGCCGATCCTGTCCACCTCA ACGATTG TGTTGTCGACAAGACCGGCGG TCTTAAATTATGCGG STY1805 1724696 - 1724211 - | periplasmic protein astE 1726000 - 1725032 - | succinylglutamate desuccinylase astB 1727336 - 1725993 - | succinylarginine dihydrolase TERM 2300 1726707 - 1726667 - G 78 -11.7 -3.16881 | opp_overlap 1726676 GATTCACCTGATTAA GACGCGCCACGGCCTCG CTGGCTT CGCGGCTCTGGCGCGCC GGATAACGAGCGGGT astD 1728811 - 1727525 - | aldehyde dehyrogenase astA 1729842 - 1728808 - | arginine succinyltransferase TERM 2301 1729280 - 1729268 - G 79 -3.3 -5.26316 | GTACCGCATAAAAAA TCCGC CCG GCTGA AATCCATAGAAAAAA argD 1731059 - 1729833 - | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 2302 1730479 - 1730449 - G 74 -2.2 -5.00884 | AGCCCCTGCAAAAAA GCGTTCGTGGCGGG GAT CACGCCGCCCTCGC CCTGCACAGGCTCTA TERM 2303 1731018 - 1730995 - G 74 -4.4 -4.75472 | CGTACAGGAATAAAA GGCGCGGGAA CATA TACCGGCACC ATCCATTCATCAAAG xthA 1731505 - 1732311 + | exonuclease III STY1813 1732384 - 1732800 + | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase STY1814 1733035 - 1732760 - | hypothetical protein TERM 2304 1733349 - 1733321 - g 73 -6 -4.44915 | gap 1 CAACCATGTACAAAA GCGCG-ACCCG CATCAAAC CGAGTTCGCGC AAGCCGTCCGTGAAG TERM 2305 1734401 - 1734384 - g 71 -9.8 -3.53012 | TTTGCGCCGGGTAAA GCCGCC AACGCG GGCGGC GTGGCGACATCGGGG TERM 2306 1734587 - 1734612 + G 70 -8.9 -3.74693 | opp_overlap 1734582, overlap 1734588 1734590 TTTCGTGAAAGTCGC CGACGCCATGC TGGC GCAGGGCGTCA TTTAATCCCGTCGCC TERM 2307 1734588 - 1734611 + G 72 -12.4 -2.84602 | opp_overlap 1734582, overlap 1734587 1734590 TTCGTGAAAGTCGCC GACGCCATGC TGGC GCAGGGCGTC ATTTAATCCCGTCGC gdhA 1733274 - 1734617 + | glutamate dehydrogenase TERM 2308 1734662 - 1734684 + T 95 -7.6 -5.41143 | overlap 1734653 1734660 1734679 TTATTCGGTCTGACG GCCTGTCTCC TCA GCAGGCGGGC TTTTTTTGCCCGCTC topB 1736596 - 1734647 - | DNA topoisomerase III TERM 2309 1734692 - 1734714 + g 75 -6.9 -4.39746 | gap 1, overlap 1734679 AGGCGGGCTTTTTTT GCCCGCTCGC TTAC GCG-GCGCGC TCTTTTTCTTTTCTC TERM 2310 1735208 - 1735220 + g 74 -6.9 -4.30576 | opp_overlap 1735202 1735205 GGCGACAACCGACAG CGGCG TAC CGTCG TTTTCCTCGTCGCGC TERM 2311 1735451 - 1735465 + g 84 -2.8 -5.31275 | opp_overlap 1735429, overlap 1735425 CGTCGGGATAATCGC GTGG TGCGCAT CCAC TTTTTTGTCATCCCA selD 1737644 - 1736601 - | selenophosphate synthetase TERM 2312 1737708 - 1737746 + r 70 -5.3 -4.42386 | gap 1, opp_overlap 1737705 ATGTGGTAAGTATCA CTGTCTGAATTACCGCGC CTTT GCTCAG-AATCCAGACAG TTTTATCCCTCAGCG STY1818 1738313 - 1737762 - | hypothetical protein TERM 2313 1737999 - 1738017 + g 70 -3 -4.6971 | overlap 1737995 1737994 AGACATCTCCTGTTC CCACACGG GAA CCTTATGG TTTTCTTCGCATTTC TERM 2314 1738055 - 1738091 + g 74 -8.6 -3.96148 | opp_overlap 1738049 1738066, overlap 1738057 CGGTAATGATCAGCG GCGCGCGAAACGGCGC ATTAC GCGCTTTTTCGATCGC TTTCTCATCCCCCCC TERM 2315 1738057 - 1738079 + g 86 -7.6 -4.69027 | opp_overlap 1738049 1738066, overlap 1738055 GTAATGATCAGCGGC GCGCGAAACG GCG CATTACGCGC TTTTTCGATCGCTTT TERM 2316 1738649 - 1738659 + G 71 -8.2 -3.80014 | opp_overlap 1738648 AACAGTGAGCAAACG GCGC GCG GCGC TTTGCTGCTGGATAT sppA 1738487 - 1740343 + | protease 4 TERM 2317 1741158 - 1741144 - g 70 -7 -4.09685 | opp_overlap 1741142 1741144 CGTCAGCCGGTAAAA GCGCTG ATT CTGCGC TCTTATGGCGTAGGC ansA 1740439 - 1741455 + | cytoplasmic asparaginase I pncA 1741482 - 1742138 + | nicotinamidase/pyrazinamidase TERM 2318 1742301 - 1742284 - T 88 -8.3 -4.90217 | opp_overlap 1742283 GAAACAGATTAAAAA GCGCGGG CTGG CCGGCGC AATGTTCTGGGAATA STY1823 1742767 - 1742489 - | hypothetical protein STY1824 1743252 - 1742809 - | methionine sulfoxide reductase B TERM 2319 1742860 - 1742848 - G 71 -6.2 -4.36914 | opp_overlap 1742859, overlap 1742850 TTTCTCGTCAGAAAA GGCC AGCGA GGCC GAGTTAACGCAATAG TERM 2320 1742989 - 1742975 - G 72 -2.1 -4.91511 | ATGCCATGAGAAAAA TCGTC TATGT AACGA ATCGCCTCTTCGCTG TERM 2321 1743492 - 1743508 + H 72 -2.9 -5.09245 | ATTGACACGATTCCG CTTGACG CTG CGTAAGG TTTTTGTAATTTTAC gapA 1743564 - 1744559 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2322 1744585 - 1744602 + T 100 -11.3 -5.95166 | opp_overlap 1744587 CACAGTCATTGGTAA GAGCGAC TCAG GTCGCTC TTTTTTTTGCTTAAA TERM 2323 1745163 - 1745175 + T 72 -9.1 -3.59087 | overlap 1745172 GGCTCAACAGGGTCT GCCGT CAC ACGGC TTTGCGCGTAATCTT STY1828 1746728 - 1745871 - | putative oxidoreductase STY1829 1748022 - 1746826 - | putative regulatory protein TERM 2324 1747442 - 1747421 - G 74 -8 -3.97689 | gap 1, overlap 1747411 GATAACGTCAAAGAA CGCT-GCGC TTTTT GCGCGAGCG GCTCAACAATGGGAA TERM 2325 1747828 - 1747815 - G 74 -3.1 -4.96501 | gap 1 TTTGATAAAAAGAAA GACCGC ATA GCG-TC GGCTCTCCCCCCTGC TERM 2326 1748283 - 1748259 - R 81 -12.9 -2.69151 | opp_overlap 1748257 1748254 1748253 1748263, overlap 1748256 1748263 GCGTTTCAGACAGCA CAAAGCCCGCA TAA CGCAGGCTTTG TCATGGTTTTTCCGG TERM 2327 1748279 - 1748263 - R 73 -7.9 -4.04318 | opp_overlap 1748257 1748254 1748253 1748263, overlap 1748259 1748256 TTCAGACAGCACAAA GCCCGCA TAA CGCAGGC TTTGTCATGGTTTTT STY1830 1749058 - 1748312 - | putative outer membrane protein TERM 2328 1750447 - 1750434 - g 74 -4.5 -4.72127 | opp_overlap 1750439, overlap 1750439 TAACAATAAAAATAA CGAAG CGTT CCTCG ACCGTGTCTATATTG STY1831 1749484 - 1751418 + | hypothetical protein TERM 2329 1751975 - 1751963 - g 95 -3.3 -5.81032 | TAATCTGAAAAAAAA CCAGC ATC GCCAG CTTAACGAGTATAAA TERM 2330 1752450 - 1752461 + G 71 -4.4 -4.63218 | GCGAAGGAAGTGGAT GAAC ATGA GTTC TTTTATTCGCAAGAG STY1832 1751541 - 1752827 + | hypothetical protein TERM 2331 1752860 - 1752835 - f 100 -14.1 -3.69354 | opp_overlap 1752835, overlap 1752820 GTGCATAACCCTAAA TCAGCCCGTAA TGCG TCACGGGCTGA TTTATCACTAACAAG TERM 2332 1752835 - 1752860 + F 95 -11.9 -3.91897 | opp_overlap 1752835 1752820 GTGCATAACCCTAAA TCAGCCCGTAA TGCG TCACGGGCTGA TTTATCACTAACAAG TERM 2333 1753732 - 1753714 - f 76 -5.2 -4.85599 | opp_overlap 1753720 GTCACCGCAGAAAAA CGCCGC GCGTTTT GCGACG CCTTTGAGGCCATTA STY1835 1755011 - 1755538 + | hypothetical protein TERM 2334 1755687 - 1755717 + F 80 -6.8 -4.62069 | CCGGTTAGCAATACG CGGCGTTGATGTCA ATT TAATGACAACGCCG TTTTTCACGTAGAAA TERM 2335 1756197 - 1756165 - g 81 -12 -3.60296 | gap 1, opp_overlap 1756172 TACGCTGATGGGAAA CCAACC-GCAGCTCG TCGC CGGGCTGCTGGTCGG TACGGTACTTGGCGT STY1838 1755842 - 1756288 + | hypothetical protein STY1839 1757062 - 1756268 - | putative transcriptional regulator TERM 2336 1756306 - 1756327 + g 100 -17.3 -5.03715 | opp_overlap 1756304 CGCCCGTCAGATACT GGCCTGGGG TCTG CCCCAGGCC TTTTTTAAACATCGT STY1840 1757163 - 1758347 + | hypothetical protein STY1841 1758466 - 1758813 + | putative bacteriophage protein STY1842 1759110 - 1758799 - | hypothetical protein TERM 2337 1758936 - 1758948 + g 80 -10.5 -3.91716 | opp_overlap 1758930 CCGTAACCAGCCACA GCGCC CGA GGCGC TTCTTTCGGCAGTAA STY1843 1759430 - 1759179 - | hypothetical protein TERM 2338 1759842 - 1759818 - R 83 -9.9 -4.16842 | opp_overlap 1759821, overlap 1759820 1759821 TTCATTTTGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 2339 1759840 - 1759820 - R 93 -12.5 -3.68324 | opp_overlap 1759821, overlap 1759818 1759821 CATTTTGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 2340 1759821 - 1759839 + r 100 -16 -4.91109 | opp_overlap 1759820 1759818 1759821 ATTTTGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 2341 1759839 - 1759821 - R 93 -16 -2.80512 | opp_overlap 1759821, overlap 1759820 1759818 ATTTTGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 1760379 - 1759921 - | transposase for insertion sequence element IS200 TERM 2342 1760492 - 1760510 + r 100 -16 -4.18197 | opp_overlap 1760482 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAT TERM 2343 1760555 - 1760525 - R 95 -14.3 -3.58726 | opp_overlap 1760525 1760528 1760532, overlap 1760528 1760532 GTTTTCCATAGACAA TAATAAAGGCTAC CTGTC GTAGCCTTTATTA TCTCTGAAAGTTCTG TERM 2344 1760525 - 1760555 + r 87 -14.3 -2.90219 | opp_overlap 1760525 1760528 1760532, overlap 1760528 1760532 GTTTTCCATAGACAA TAATAAAGGCTAC CTGTC GTAGCCTTTATTA TCTCTGAAAGTTCTG TERM 2345 1760552 - 1760528 - R 95 -11.6 -3.92996 | opp_overlap 1760528 1760525 1760532, overlap 1760525 1760532 TTCCATAGACAATAA TAAAGGCTAC CTGTC GTAGCCTTTA TTATCTCTGAAAGTT TERM 2346 1760528 - 1760552 + r 86 -11.6 -3.5947 | opp_overlap 1760525 1760528 1760532, overlap 1760525 1760532 TTCCATAGACAATAA TAAAGGCTAC CTGTC GTAGCCTTTA TTATCTCTGAAAGTT TERM 2347 1760548 - 1760532 - R 82 -8 -4.55997 | opp_overlap 1760532 1760528 1760525, overlap 1760528 1760525 ATAGACAATAATAAA GGCTAC CTGTC GTAGCC TTTATTATCTCTGAA TERM 2348 1760532 - 1760548 + r 79 -8 -4.42974 | opp_overlap 1760528 1760525 1760532, overlap 1760528 1760525 ATAGACAATAATAAA GGCTAC CTGTC GTAGCC TTTATTATCTCTGAA STY1846 1760822 - 1760574 - | hypothetical protein STY1847 1761015 - 1760830 - | hypothetical protein TERM 2349 1761058 - 1761079 + r 100 -12.3 -5.53991 | gap 1 CTTCCAGTATTATTT GCCCGC-CTC ACC GAGTGCGGGC TTTTTTTGCTAACTG STY1848 1761783 - 1761136 - | hypothetical protein TERM 2350 1761930 - 1761958 + r 76 -11.7 -2.75769 | opp_overlap 1761930, overlap 1761929 TTCAATACGCAAAAA CCGCATCACGC TGGCGAC GCGCGATGCGG CTTCTCATTTAAAGA TERM 2351 1761958 - 1761930 - R 100 -13.9 -4.74706 | opp_overlap 1761930 1761929 TTCAATACGCAAAAA CCGCATCACGC TGGCGAC GCGCGATGCGG CTTCTCATTTAAAGA STY1849 1762189 - 1762007 - | hypothetical protein STY1850 1762554 - 1762192 - | hypothetical protein TERM 2352 1762720 - 1762697 - R 77 -10.2 -3.35344 | overlap 1762698 1762700 CCGAAAGGAGAGCAA TGACCCGCCG TTCA CGACGGGTCC AGGGGGTTAAGACTG TERM 2353 1762719 - 1762698 - R 83 -13.7 -2.60725 | overlap 1762697 1762700 CGAAAGGAGAGCAAT GACCCGCCG TTCA CGACGGGTC CAGGGGGTTAAGACT TERM 2354 1762717 - 1762700 - R 72 -10.5 -2.83634 | overlap 1762698 1762697 AAAGGAGAGCAATGA CCCGCCG TTCA CGACGGG TCCAGGGGGTTAAGA STY1851 1763365 - 1762727 - | leucine export protein LeuE aroQ 1764106 - 1763561 - | chorismate mutase TERM 2355 1764285 - 1764318 + G 93 -4.7 -5.4756 | opp_overlap 1764285 1764294 1764295, overlap 1764295 AAAATATACAACAAA TCACACAAATGTGAT GCAC ATCACGTTTTTATGA TTTTTTATTACAGTT TERM 2356 1764298 - 1764285 - g 70 -5.3 -4.5002 | opp_overlap 1764285 1764295, overlap 1764294 1764295 AAAATATACAACAAA TCACA CAAA TGTGA TGCACATCACGTTTT STY1853 1764189 - 1764344 + | hypothetical protein STY1854 1764423 - 1764671 + | hypothetical protein TERM 2357 1764782 - 1764760 - T 73 -11.4 -2.71144 | opp_overlap 1764757 1764764, overlap 1764764 GACTGGGGTGAACGA CAAATCTGCC GGG AGCAGATTTG AACGTCGCTTGCGAC TERM 2358 1764879 - 1764904 + T 79 -11.1 -3.41693 | opp_overlap 1764879 1764882, overlap 1764882 TATGAAGGGTATAAA CAAGGGAGGGG GTTA CTCCTCCCCTG TTCGTTAATAATGCA TERM 2359 1764904 - 1764879 - T 87 -11.1 -3.93236 | opp_overlap 1764879 1764882, overlap 1764882 TATGAAGGGTATAAA CAAGGGAGGGG GTTA CTCCTCCCCTG TTCGTTAATAATGCA TERM 2360 1764882 - 1764901 + T 73 -11.4 -2.56164 | opp_overlap 1764882 1764879, overlap 1764879 GAAGGGTATAAACAA GGGAGGGG GTTA CTCCTCCC CTGTTCGTTAATAAT TERM 2361 1764901 - 1764882 - T 79 -9.2 -4.08948 | opp_overlap 1764879 1764882, overlap 1764879 GAAGGGTATAAACAA GGGAGGGG GTTA CTCCTCCC CTGTTCGTTAATAAT STY1855 1765774 - 1764926 - | putative transcriptional regulator TERM 2362 1765700 - 1765659 - G 80 -4.3 -5.10461 | overlap 1765662 TCTATGCAATAAAAA CGATTGCCAGCTTCATCTT TGGT AGGTTGAAGCAGGCCATAG CGTTCCCAGGACCTG STY1856 1766436 - 1765843 - | putative regulatory protein TERM 2363 1766136 - 1766119 - G 77 -4.1 -5.02074 | TGATCTGGGAAAAAA TTGACCA GCAG CGGCCAA AATCAGTAATTCGCG aadA 1767369 - 1766581 - | aminoglycoside resistance protein TERM 2364 1767438 - 1767457 + r 95 -12.2 -4.19506 | opp_overlap 1767438 AACGGCAGAAAAAAA GCTCGCTA TTCA TAGCGAGC TTTTAACATTGCAAT TERM 2365 1767457 - 1767438 - R 100 -12.2 -5.63504 | opp_overlap 1767438 AACGGCAGAAAAAAA GCTCGCTA TTCA TAGCGAGC TTTTAACATTGCAAT STY1858 1768128 - 1767478 - | hypothetical protein TERM 2366 1768139 - 1768159 + r 87 -11.3 -4.00486 | opp_overlap 1768133 ACCAAAACGTTACCC TCATCTTTC TTA GAAAGATGA TTGTTATATTATAAC TERM 2367 1768203 - 1768221 + r 100 -11.7 -5.21709 | opp_overlap 1768201 1768197 CAACAGAAACTCAGC GGCCACC GCGCA GGTGGCC TTTTTTGATATCAAC STY1859 1768648 - 1768322 - | hypothetical protein TERM 2368 1768701 - 1768722 + H 83 -10.1 -4.02953 | opp_overlap 1768698, overlap 1768699 CTGCACAGAAACGCC GGGATAGCC AAAC GGCTACCCC TCTTTTTCATGCTTT STY1860 1768842 - 1769975 + | hypothetical protein TERM 2369 1770016 - 1769991 - T 77 -11.1 -3.29043 | opp_overlap 1769993, overlap 1769993 AATCTCTGCCGACAA TACCGGGAACC CATG GGCTCCCGGTG CGTTAACGGCGACAC TERM 2370 1769993 - 1770014 + T 73 -11.5 -2.52464 | opp_overlap 1769993 1769991 TCTCTGCCGACAATA CCGGGAACC CATG GGCTCCCGG TGCGTTAACGGCGAC TERM 2371 1770014 - 1769993 - T 86 -13.7 -3.21276 | opp_overlap 1769993, overlap 1769991 TCTCTGCCGACAATA CCGGGAACC CATG GGCTCCCGG TGCGTTAACGGCGAC STY1861 1770647 - 1770057 - | putative ABC transport ATP-binding subunit TERM 2372 1770246 - 1770226 - G 95 -10.4 -4.5442 | opp_overlap 1770232 TCGGCAATCAGAAAA CGCGCTCG CGGGT CAAGCGCG CGTAGTATCGCAATA STY1862 1771438 - 1770641 - | putative ABC transport ATP-binding protein STY1863 1772244 - 1771432 - | putative inner membrane transport protein TERM 2373 1772021 - 1771988 - G 75 -13.1 -2.52516 | gap 1, opp_overlap 1772010, overlap 1771995 GCCGCCATCACTAAC GCGATAACGCCGCTGC ACA GC-GCGGCGCCAACGC CAATTTGTAAACTGG TERM 2374 1772014 - 1771995 - G 75 -11.4 -3.37464 | gap 1, opp_overlap 1772010, overlap 1771988 TCACTAACGCGATAA CGCCGCTGC ACA GC-GCGGCG CCAACGCCAATTTGT STY1864 1773211 - 1772234 - | putative inner membrane transport protein TERM 2375 1773168 - 1773139 - G 73 -6.3 -4.48175 | overlap 1773143 AAAAGCTAAGCAAAA TGAAGGTGCCGGC AGCC ACCAGCACCAACA GAATAATCAGCCGCA TERM 2376 1773164 - 1773143 - G 74 -10.1 -3.75718 | overlap 1773139 GCTAAGCAAAATGAA GGTGCCGGC AGCC ACCAGCACC AACAGAATAATCAGC STY1865 1774842 - 1773208 - | putative substrate-binding transport protein TERM 2377 1774271 - 1774286 + g 79 -3.2 -5.1861 | overlap 1774272 GGACCGGCGCCTATC GGTTCG CGGG CGAACG TTTTTTCATCATAAC TERM 2378 1775486 - 1775515 + H 71 -3.5 -4.76274 | opp_overlap 1775487 1775490, overlap 1775487 1775490 TACACCACTTTTTAA ATGACTGTCCGGA CATT TTCGGACGGTAAG TTTTCTATTAATTTA STY1867 1775546 - 1775860 + | putative lipoprotein TERM 2379 1775893 - 1775864 - f 76 -8.5 -4.05607 | opp_overlap 1775870, overlap 1775866 1775870 AGAGGACAATAACAA CAGTAAGCCGGCG ATGC CGCCGGCTTTTTA TCCCATTTTACGTGC TERM 2380 1775891 - 1775866 - f 72 -8.9 -3.60967 | opp_overlap 1775870, overlap 1775864 1775870 AGGACAATAACAACA GTAAGCCGGCG ATGC CGCCGGCTTTT TATCCCATTTTACGT TERM 2381 1775870 - 1775887 + F 100 -14.1 -4.90296 | opp_overlap 1775866 1775864 1775870 CAATAACAACAGTAA GCCGGCG ATGC CGCCGGC TTTTTATCCCATTTT TERM 2382 1775887 - 1775870 - f 93 -14.1 -3.50302 | opp_overlap 1775870, overlap 1775866 1775864 CAATAACAACAGTAA GCCGGCG ATGC CGCCGGC TTTTTATCCCATTTT STY1868 1776009 - 1776539 + | putative cytochrome TERM 2383 1776594 - 1776621 + T 77 -10.6 -3.41126 | overlap 1776595 AGGCATTATTATTCC AGCGCTATCGGT TTCG ACTGATAGCGCC TTATACCGTTTGTAA TERM 2384 1776595 - 1776620 + T 83 -14.1 -2.64194 | overlap 1776594 GGCATTATTATTCCA GCGCTATCGGT TTCG ACTGATAGCGC CTTATACCGTTTGTA STY1869 1777665 - 1776622 - | hypothetical protein TERM 2385 1776916 - 1776901 - G 73 -5.4 -4.58663 | ATTATTCGGTAAAAA TGTCGC GCGG GCAACA GACCAGGTAGCGCCA TERM 2386 1777440 - 1777426 - G 74 -7.8 -4.18506 | CGACGGGTAAAATAA CACCGG ATT CCAGTG CGCTTCCCCCTCGCG STY1870 1777746 - 1777895 + | hypothetical protein TERM 2387 1777997 - 1777966 - T 93 -16 -2.87211 | opp_overlap 1777964 1777969, overlap 1777969 ACTTTTCGCTACAGA CAATGAAGGCCCGT CTAA ACGGGCCTCCATTA ATGCTTTTATGATTT TERM 2388 1777969 - 1777994 + T 86 -13.3 -3.3972 | opp_overlap 1777966 1777969, overlap 1777964 TTTCGCTACAGACAA TGAAGGCCCGT CTAA ACGGGCCTCCA TTAATGCTTTTATGA TERM 2389 1777994 - 1777969 - T 100 -15.5 -3.58726 | opp_overlap 1777969 1777964, overlap 1777966 TTTCGCTACAGACAA TGAAGGCCCGT CTAA ACGGGCCTCCA TTAATGCTTTTATGA STY1871 1778474 - 1778004 - | putative heat shock protein STY1873 1778896 - 1778669 - | hypothetical protein TERM 2390 1778759 - 1778776 + g 77 -8.3 -4.07885 | opp_overlap 1778755 1778758, overlap 1778760 CATTATCAAACCCAG CGCCGCC TTCG GGCGGCC TTTTGGGAGGAAATA TERM 2391 1778760 - 1778775 + g 76 -11.8 -3.04517 | opp_overlap 1778755 1778758, overlap 1778759 ATTATCAAACCCAGC GCCGCC TTCG GGCGGC CTTTTGGGAGGAAAT TERM 2392 1779056 - 1779030 - R 70 -9.3 -3.41125 | overlap 1779031 TTTATACACCTACAA TTTGCGCCCGG CTGCT CCGGGCGCCAT ACCTGAAGATATGAC TERM 2393 1779055 - 1779031 - R 78 -12.8 -2.64354 | overlap 1779030 TTATACACCTACAAT TTGCGCCCGG CTGCT CCGGGCGCCA TACCTGAAGATATGA STY1874 1779221 - 1779096 - | putative lipoprotein STY1874a 1779386 - 1779297 - | hypothetical protein STY1874b 1779530 - 1779441 - | hypothetical protein STY1875 1779602 - 1779943 + | lysozyme inhibitor TERM 2394 1779974 - 1779954 - T 80 -9.7 -3.89881 | opp_overlap 1779954, overlap 1779944 ACTAACCTTCAGAAA TGCCTGAAG GCT CATCAGGCA TTTCCACTTCAACCT TERM 2395 1779954 - 1779974 + T 79 -9.7 -3.66356 | opp_overlap 1779944 1779954 ACTAACCTTCAGAAA TGCCTGAAG GCT CATCAGGCA TTTCCACTTCAACCT TERM 2396 1780213 - 1780245 + T 82 -13.4 -3.05384 | opp_overlap 1780160 ACGATCACCGGCCAA CCGCGCCAGGGTCT TGCAT ACGCTCTGGCGCGG TTAAATCCCCAGGCC STY1876 1780444 - 1780271 - | hypothetical protein TERM 2397 1781138 - 1781167 + G 95 -14.3 -3.68359 | overlap 1781142 1781161 CCTGTTTTGTAACTG GCGGTGCGGAAGG CGAA CCTTCCGCATAGC TTATGCTTTTCAGAA STY1877 1780996 - 1781166 + | hypothetical protein TERM 2398 1781142 - 1781163 + T 86 -14.5 -2.65876 | overlap 1781138 1781161 TTTTGTAACTGGCGG TGCGGAAGG CGAA CCTTCCGCA TAGCTTATGCTTTTC pagC 1781734 - 1781177 - | outer membrane invasion protein TERM 2399 1781312 - 1781325 + g 73 -5.3 -4.63218 | CCAGGCAAATCCCGT TTTCC TTGA GGAAA TTTTGTTAGAAAAAG TERM 2400 1781428 - 1781418 - G 75 -4 -4.93365 | GCGTATAACGAAAAA TTGT CAG ACAA TCGATAGGCTGGCCC STY1879 1782240 - 1782112 - | hypothetical protein STY1880 1782490 - 1782326 - | hypothetical protein TERM 2401 1782738 - 1782700 - g 72 -2.3 -4.92363 | gap 1, overlap 1782704 AAATACCGATAAAAA GCAAGCCAGGCAGATTAG TTCA CCATCCTGCCCGACG-GC AAAACCCATGATGTC pagD 1782539 - 1782802 + | putative outer membrane virulence protein cspH 1782934 - 1783146 + | putative cold shock protein envE 1783564 - 1784085 + | putative lipoprotein TERM 2402 1784109 - 1784144 + F 73 -10.5 -2.96366 | opp_overlap 1784109, overlap 1784108 CGCTGTGAAGAGAGA GCCGCTAACCTCTTG ACATGA CAACAGGTTAGCGAC CTTTACTTCCATGTG TERM 2403 1784144 - 1784109 - f 80 -12.7 -3.09273 | opp_overlap 1784109 1784108 CGCTGTGAAGAGAGA GCCGCTAACCTCTTG ACATGA CAACAGGTTAGCGAC CTTTACTTCCATGTG msgA 1784276 - 1784515 + | putative virulence protein TERM 2404 1784553 - 1784570 + F 79 -12.7 -2.89191 | opp_overlap 1784553, overlap 1784555 ATGTCCGATCGAAAA CAGCGCC CTGA GGCGCTG TCTGTGACGATATAA TERM 2405 1784570 - 1784553 - f 95 -12.7 -4.18197 | opp_overlap 1784553 1784555 ATGTCCGATCGAAAA CAGCGCC CTGA GGCGCTG TCTGTGACGATATAA TERM 2406 1784555 - 1784568 + F 70 -9.5 -2.99649 | opp_overlap 1784553, overlap 1784553 GTCCGATCGAAAACA GCGCC CTGA GGCGC TGTCTGTGACGATAT cdtB 1785388 - 1786197 + | putative toxin-like protein STY1887 1786270 - 1786647 + | hypothetical protein STY1889 1787337 - 1786795 - | hypothetical protein STY1890 1788257 - 1787529 - | toxin subunit TERM 2407 1788235 - 1788249 + g 76 -2.9 -5.05712 | opp_overlap 1788235, overlap 1788229 CTAACTATAGATAAG GTTAA GAATA TTAAC TTTTTCATTATTTCT STY1891 1788687 - 1788274 - | toxin subunit TERM 2408 1789439 - 1789427 - R 72 -4.8 -4.59109 | TAGATGGCGTAAAAA CCTG ATGAG CAGG AATATCGATAGCCAG TERM 2409 1789662 - 1789652 - R 82 -6.8 -4.91194 | opp_overlap 1789632 1789651 ATAATAAATATAAAA GCAG TTA CTGC CTACCTTAAGAAGTA TERM 2410 1789712 - 1789698 - R 72 -8.6 -3.69323 | TCATGATCATTTAAA GCTCTT TTA AAGAGC CTGATAATAAGCTTG STY1893 1790852 - 1789728 - | putative bacteriophage protein TERM 2411 1791278 - 1791254 - R 90 -9.9 -4.51224 | opp_overlap 1791257, overlap 1791256 1791257 AATACTAATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 2412 1791276 - 1791256 - R 95 -12.5 -3.8457 | opp_overlap 1791257, overlap 1791254 1791257 TACTAATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 2413 1791257 - 1791275 + r 100 -16 -4.91109 | opp_overlap 1791256 1791254 1791257 ACTAATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 2414 1791275 - 1791257 - R 93 -16 -2.89657 | opp_overlap 1791257, overlap 1791256 1791254 ACTAATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 1791815 - 1791357 - | transposase for insertion sequence element IS200 TERM 2415 1791928 - 1791946 + r 100 -16 -4.18018 | opp_overlap 1791918 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 2416 1791986 - 1791965 - R 100 -10.2 -5.4251 | TCCATAGACAAAAAA GCCGGATA GTATCT TATCCGGC CTACACAAGCTAAAA kdsA 1792863 - 1792009 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2417 1792295 - 1792275 - G 77 -8.2 -4.14392 | opp_overlap 1792275 1792274, overlap 1792278 GGGTAACGTCGAAAA TCACCGGC GAGTT GCCGGAGA CCTTTTTCATCACGC TERM 2418 1792732 - 1792716 - G 73 -10.9 -3.406 | TGAACACGTAAGGAA TACCCAG CTT CTGGGTA ACGGTTACGTAGTGC STY1898 1793710 - 1792901 - | putative transcriptional regulator TERM 2419 1793419 - 1793431 + g 74 -2.6 -5.03747 | opp_overlap 1793416 CGCCCAACGATACAG CGCT CCCCT GGCG TTTTTTCAGGACTTT STY1899 1794103 - 1793714 - | putative transcriptional regulator TERM 2420 1793812 - 1793796 - G 73 -5.8 -4.51196 | gap 1 GGGAAAGCGATAAAA CGC-GCC TGCT GGCTGCG CGCCTGACGATAATC hemK 1794933 - 1794100 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 2421 1794757 - 1794777 + g 76 -11.9 -3.15663 | overlap 1794760 CTGTTTACGCCGCTG CAGCAGCTC CGC GAGCTGTTG TTGCTGGACATCGGT TERM 2422 1794760 - 1794774 + g 74 -10 -3.72324 | overlap 1794757 TTTACGCCGCTGCAG CAGCTC CGC GAGCTG TTGTTGCTGGACATC prfA 1796015 - 1794933 - | peptide chain release factor 1 TERM 2423 1795118 - 1795160 + g 93 -12 -4.24002 | gap 1, opp_overlap 1795127, overlap 1795119 1795156 1795157 1795158 CGCTGCGATCGCCGC TGCCAAGCAGGTTGCGGCG CGTTGA CGCCTCGGCCTGC-TGGCG TTTTGCCGTTTCGGC TERM 2424 1795119 - 1795159 + g 84 -13.3 -3.13919 | gap 1, opp_overlap 1795127, overlap 1795118 1795156 1795157 1795158 GCTGCGATCGCCGCT GCCAAGCAGGTTGCGGCG CGTTGA CGCCTCGGCCTGC-TGGC GTTTTGCCGTTTCGG TERM 2425 1795179 - 1795214 + g 82 -5.2 -4.98911 | overlap 1795158 TGCCGTTTCGGCGGC GTGAATGCGCGCCCCG AGCA CCGAGAGCGCTTTCGC TTTGTTTTTATGCTG hemA 1797312 - 1796056 - | glutamyl-tRNA reductase lolB 1797626 - 1798249 + | outer membrane lipoprotein LolB TERM 2426 1798434 - 1798397 - g 77 -11.5 -3.58343 | gap 1, overlap 1798409 GTCACGATGGCGAAA TCCATTTATTAACGCCGG TAA CCGGCGTTGA-AAATGAA GACAATCTGATCGTC TERM 2427 1798423 - 1798409 - g 83 -12.8 -3.19656 | overlap 1798397 AAATCCATTTATTAA CGCCGG TAA CCGGCG TTGAAAATGAAGACA TERM 2428 1798634 - 1798677 + G 71 -6.1 -4.24342 | gap 3, opp_overlap 1798636, overlap 1798636 GGCTTTCCATTGATG AACTGGCGACGCTCGGC-CTGA CGC TCGGCGCCGA-CGTC-CCGGTC TTTGTTCGTGGCCAC TERM 2429 1798636 - 1798675 + G 70 -8.7 -3.72374 | gap 3, opp_overlap 1798636, overlap 1798634 CTTTCCATTGATGAA CTGGCGACGCTCGGC-CTGA CGC TCGGCGCCGA-CGTC-CCGG TCTTTGTTCGTGGCC ipk 1798246 - 1799097 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2430 1799232 - 1799246 + F 75 -10 -3.62522 | GGCAAGCTGAGCTTC GGTGAC AAC GTCACC TTGTTCCAGACGTTG prsA 1799363 - 1800310 + | ribose-phosphate pyrophosphokinase TERM 2431 1800342 - 1800329 - f 75 -9.5 -3.60475 | opp_overlap 1800329 AACCCGGATCTGAAA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA TERM 2432 1800329 - 1800342 + F 100 -9.5 -5.76633 | opp_overlap 1800329 AACCCGGATCTGAAA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA TERM 2433 1801265 - 1801279 + G 71 -7.8 -3.92075 | GGATTCACTGCGCGC GCTGCT GCC AGCGGC TTTCTCGATGGCAAT STY1907 1800435 - 1802120 + | putative sulfate transporter YchM STY1908 1802443 - 1802222 - | hypothetical protein TERM 2434 1802576 - 1802548 - H 77 -9.1 -3.96148 | overlap 1802517 GGGTGCGATCACAAA TGTAAAGTTTCAT TTA ACAAAACTTTACA AATAACACTCTGAAC pth 1802695 - 1803303 + | peptidyl-tRNA hydrolase TERM 2435 1803308 - 1803335 + F 70 -9.8 -2.94099 | opp_overlap 1803307 1803305 AGGCGCAATAACCAG TGATGTGCGGCA TTTT TGCCGCACGCCG TGTATAATAGGCGAA STY1910 1803420 - 1804511 + | translation-associated GTPase TERM 2436 1804596 - 1804569 - T 74 -11.4 -2.80991 | opp_overlap 1804574, overlap 1804574 AGGCAAAGAAACTCA TAAAATCCACGC AGCC GCGTGGATTTTT TATTTCATAATATCT TERM 2437 1804591 - 1804574 - T 95 -11.3 -4.53707 | opp_overlap 1804574, overlap 1804569 AAGAAACTCATAAAA TCCACGC AGCC GCGTGGA TTTTTTATTTCATAA TERM 2438 1804574 - 1804591 + T 100 -11.3 -5.68438 | opp_overlap 1804574 1804569 AAGAAACTCATAAAA TCCACGC AGCC GCGTGGA TTTTTTATTTCATAA STY1911 1805935 - 1804670 - | hypothetical protein TERM 2439 1804715 - 1804704 - G 77 -4.4 -4.93296 | opp_overlap 1804704 GTATGATTATAAAAA GGAT GCTG ATCC TTTAGCGGCGTCTCA TERM 2440 1806882 - 1806868 - H 74 -7 -4.35017 | opp_overlap 1806873, overlap 1806870 GAAAAACTGAAGAAA GCCGCC GCG GGCGCC AGCGCTATTATCGCC TERM 2441 1808615 - 1808638 + G 74 -7.4 -4.09739 | gap 1 CTGGTACCGCTATCC GGACGATCGGC TGG GCCG-TCATCC TTTTGACGGCATTAC TERM 2442 1808997 - 1808981 - g 83 -7.9 -4.67904 | GACCAACCTGAAAAA CGGCGAC CTG GCCACCG CCAATACCGAGAAAT STY1914 1807545 - 1809338 + | hydrogenase 1 large subunit hyaC 1809357 - 1810088 + | hydrogenase 1 b-type cytochrome subunit hyaD 1810085 - 1810681 + | hydrogenase 1 maturation protease TERM 2443 1810930 - 1810959 + G 71 -4.3 -4.56597 | gap 1, opp_overlap 1810938, overlap 1810931 1810934 1810935 CTATCGGCGATCGCT TTAATGTACGTCGG TTT CCGGCG-ACGTTGG TTTTTACAGACGGCG hyaE 1810671 - 1811075 + | hydrogenase-1 operon protein HyaE TERM 2444 1811650 - 1811672 + G 74 -3.2 -4.84017 | overlap 1811652 CAATTTGACCCAACT GCCGCTCAGC GAG GCCGATCGTC TTTTTCTGGCGCGTT hyaF 1811072 - 1811920 + | hydrogenase-1 operon protein HyaF TERM 2445 1812627 - 1812651 + G 100 -14.3 -3.83998 | TCTGCTACGTGGCCG CGAGCGTGAGG TGG CCTTGCGCTCG TTTGCTATCGGCTCA appC 1811995 - 1813539 + | cytochrome bd-II oxidase subunit I appB 1813551 - 1814687 + | cytochrome oxidase subunit II TERM 2446 1814796 - 1814827 + F 100 -13.8 -5.36364 | opp_overlap 1814799, overlap 1814799 CAACAATAAAGAGGT AAACCGGGGTCAGA GCCG TCTGACTCCGGTTA TTTTTATCTTTTTAC TERM 2447 1814799 - 1814824 + F 100 -15.5 -4.69512 | opp_overlap 1814799, overlap 1814796 CAATAAAGAGGTAAA CCGGGGTCAGA GCCG TCTGACTCCGG TTATTTTTATCTTTT TERM 2448 1814824 - 1814799 - f 95 -13.3 -3.84931 | opp_overlap 1814796 1814799 CAATAAAGAGGTAAA CCGGGGTCAGA GCCG TCTGACTCCGG TTATTTTTATCTTTT gdhA 1815290 - 1816459 + | glutamate dehydrogenase TERM 2449 1816500 - 1816483 - T 71 -7 -4.08945 | opp_overlap 1816483 ATCATTGCGCTAAAA TCCACG TCCCGG CGTGGA TTTTTTGTCTGTATA TERM 2450 1816483 - 1816500 + T 95 -7.7 -5.4492 | opp_overlap 1816483 ATCATTGCGCTAAAA TCCACGT CCCG GCGTGGA TTTTTTGTCTGTATA TERM 2451 1817766 - 1817733 - T 75 -6.5 -4.3898 | overlap 1817735 ATCAGCTGGAGAAAA CCCTCGCCCGCGCCA GCGC TGCGGCGGGCGATCG GGCCAAAGCCTCGCA TERM 2452 1818376 - 1818363 - T 78 -5.9 -4.8543 | CAACGCCGACAAAAA CGCCG TCTG CAGCG ACGCAGTAACGCGTG TERM 2453 1818428 - 1818401 - T 76 -12 -2.62184 | opp_overlap 1818396 CGCGTGTTTATAGTA GGTTGACCCGGC GCTG ACCGGGTCAACG CTTACACGTTCTGCA STY1925 1818702 - 1818448 - | hypothetical protein STY1926 1818871 - 1819605 + | hypothetical protein mltE 1820230 - 1819619 - | membrane-bound lytic murein transglycosylase E TERM 2454 1820085 - 1820095 + g 90 -8.2 -4.68593 | GGATCAACCCCCCAT GCCG CCC CGGC TTTTTCACTGATGGG TERM 2455 1820466 - 1820452 - g 75 -12.8 -2.55896 | opp_overlap 1820460, overlap 1820451 1820449 TGTATTAACCAACAG GCCGCG TTA CGCGGC GTTCAGCGCCTGACT TERM 2456 1820524 - 1820534 + G 70 -6.8 -4.11216 | GAGGTGATTCGTCGC CGCT ATC AGCG TTTTGCCGGTACGGA ldcA 1820401 - 1821315 + | L,D-carboxypeptidase A TERM 2457 1821894 - 1821907 + G 86 -3.7 -5.43866 | opp_overlap 1821883 1821894 CGAATCGGGAAGTAA CGACC CGAT GGCCG TTTTTTTGACCATTA TERM 2458 1822080 - 1822111 + G 74 -2.2 -4.98531 | gap 1, overlap 1822081 1822085 GCCCAGCGGCCTGTA TCCG-ATGCTGGCGC TCA GCGGCGGTATTCTGA TTTTTGCTTTGACGA TERM 2459 1822427 - 1822450 + G 76 -9.6 -3.81022 | gap 1 TTTTCATCAGTTGGG TCGG-ACTGCG CGG CGCGGTGCCGA TTATTCTCGCCGTTT STY1929 1821412 - 1823145 + | potassium/proton antiporter TERM 2460 1823166 - 1823146 - T 74 -8.2 -3.90241 | overlap 1823159 GACGAAGCAGAATAA GGTCGCCG GACAA CGTCGACC CGCCCCCGGTGGACC TERM 2461 1823189 - 1823159 - T 90 -14.7 -3.29043 | overlap 1823146 AAGGTCGCCGGACAA CGTCGACCCGCCC CCGGT GGACCGGTCGACG CCTTAGCCTGAGTTA TERM 2462 1823269 - 1823223 - T 72 -10.3 -2.91593 | gap 3, overlap 1823222 TACGTTGTCACAAAC GGCACGCGCGGCGCTACGGCGC ACAGTA GC-CCATAGC-CCA-GCGTGCC TGCCGCAGAGGCGAC dadX 1824277 - 1823207 - | alanine racemase dadA 1825589 - 1824291 - | D-amino acid dehydrogenase small subunit TERM 2463 1825381 - 1825391 + g 70 -5.4 -4.42788 | AGCGGCGCATGGCGC TGGA ACA TCCA TTTTATCGCCTTCAG TERM 2464 1825826 - 1825836 + H 72 -3.2 -5.06451 | AAAGAAAAGTTTTCA CGAT CAA GTCG TTTTTTAACATGGTG TERM 2465 1826679 - 1826661 - g 75 -3.7 -4.87665 | TTTTATGGAGAAAAA CGCCCCG TTGCT CGAGCCG TGGCAGCGCGAAATT STY1933 1825912 - 1827444 + | hypothetical protein fadR 1828210 - 1827491 - | fatty acid metabolism regulator TERM 2466 1828446 - 1828465 + G 89 -9.2 -4.57569 | TGGAGATCTCATGGG GTCGCGCC ATGT GGCGCAAC TTTTTAGGCCAGTCG TERM 2467 1828760 - 1828771 + G 72 -2.2 -4.86385 | overlap 1828759 ATCTACTTTATGAAG CAGT TATT GCTG TTTATTTTTACCCGT nhaB 1828430 - 1829974 + | sodium/proton antiporter dsbB 1830116 - 1830646 + | disulfide bond formation protein B TERM 2468 1830668 - 1830653 - f 73 -10.4 -2.98823 | opp_overlap 1830653 GGTCGTTGATACACA CGCTCC TTCG GGAGCG TTTTTTTGCCCGAAG TERM 2469 1830653 - 1830668 + F 100 -10.4 -5.40072 | opp_overlap 1830653 GGTCGTTGATACACA CGCTCC TTCG GGAGCG TTTTTTTGCCCGAAG STY1937 1830754 - 1831095 + | hypothetical protein STY1938 1831340 - 1831167 - | hypothetical protein TERM 2470 1831499 - 1831483 - R 100 -10.1 -5.17054 | opp_overlap 1831483 AGAAGATGCAAAAAA CCGCCTG GCA CAGACGG TGCATCAGGCGGTTG STY1940 1831669 - 1831532 - | hypothetical protein STY1941 1832467 - 1832021 - | hypothetical protein STY1942 1833219 - 1832560 - | hypothetical protein TERM 2471 1832870 - 1832881 + g 77 -3.6 -5.10154 | opp_overlap 1832852 TTGGCTTTTTCCCAA GGCT GTCC GGCC TTTTTCATTTTCCCT STY1943 1833601 - 1833269 - | hypothetical protein TERM 2472 1833797 - 1833810 + G 87 -8.1 -4.56597 | opp_overlap 1833796 1833794 1833797 TAGAAGACAAAATAG CGCAG GCTC CTGCG TTTTTAAAACACGCC minC 1833688 - 1834395 + | septum formation inhibitor TERM 2473 1834716 - 1834703 - g 71 -9.5 -3.5241 | overlap 1834701 GACCCGGGATAAAGA CGCGC TAAC GCGCG AAGGCGTCGCTAAGG minD 1834419 - 1835231 + | cell division inhibitor MinD TERM 2474 1835456 - 1835439 - g 76 -5.5 -4.72986 | opp_overlap 1835441 CAGCTTGAGCAAAAA GATGGTG ATAT CTCCATC CTTGAACTTAACGTA minE 1835235 - 1835501 + | cell division topological specificity factor MinE TERM 2475 1835528 - 1835557 + T 100 -15.3 -5.57054 | opp_overlap 1835535, overlap 1835535 GGAAAATTCCTGGAT TAAAAAAGGCAGA AGAA TCTGCCTTTTTTA TTTTTTTACATTATT TERM 2476 1835535 - 1835550 + T 100 -9 -6.12458 | opp_overlap 1835535, overlap 1835528 TCCTGGATTAAAAAA GGCAGA AGAA TCTGCC TTTTTTATTTTTTTA TERM 2477 1835550 - 1835535 - T 100 -9 -5.14563 | opp_overlap 1835535 1835528 TCCTGGATTAAAAAA GGCAGA AGAA TCTGCC TTTTTTATTTTTTTA rnd 1836750 - 1835623 - | ribonuclease D TERM 2478 1836682 - 1836728 + g 83 -12.4 -3.74626 | gap 2, opp_overlap 1836681 1836680 1836678 ATCTAAAGCAATAGC CGGAC-ATGCGC-GGACAGCCT CACAC AGGCTCGCCAGCGCATCGTCCG TTTCAATCATTTGGT TERM 2479 1836799 - 1836783 - R 100 -11.5 -5.75342 | opp_overlap 1836783 TCGCGCCAAAAAAAA CGCCGGC TTA ACCGGCG TCTCTCGTTAGCTGA TERM 2480 1836783 - 1836799 + r 73 -10.8 -3.0127 | opp_overlap 1836783 TCGCGCCAAAAAAAA CGCCGG CTTAA CCGGCG TCTCTCGTTAGCTGA fadD 1838508 - 1836823 - | long-chain-fatty-acid--CoA ligase TERM 2481 1838691 - 1838667 - R 86 -14.4 -2.56596 | opp_overlap 1838667 1838671, overlap 1838671 GTCTCTATGAATGCA GAAACAGCGG ACCAG CCGCTGTTTC TTTTATTGATAAAAC TERM 2482 1838667 - 1838691 + r 100 -14.4 -4.71426 | opp_overlap 1838667 1838671, overlap 1838671 GTCTCTATGAATGCA GAAACAGCGG ACCAG CCGCTGTTTC TTTTATTGATAAAAC TERM 2483 1838671 - 1838687 + r 93 -9.4 -4.90302 | opp_overlap 1838671 1838667, overlap 1838667 CTATGAATGCAGAAA CAGCGG ACCAG CCGCTG TTTCTTTTATTGATA TERM 2484 1838687 - 1838671 - R 77 -9.4 -3.98826 | opp_overlap 1838667 1838671, overlap 1838667 CTATGAATGCAGAAA CAGCGG ACCAG CCGCTG TTTCTTTTATTGATA STY1949 1839294 - 1838713 - | putative lipoprotein STY1950 1840060 - 1839365 - | hypothetical protein STY1951 1842028 - 1840118 - | putative ATP-dependent helicase TERM 2485 1841453 - 1841431 - G 80 -4.8 -5.07486 | overlap 1841432 TATCCGCAAGAAAAA GGTGGTGGTT TAC AATCACCACA TCCGCGTCCATCGCC TERM 2486 1842230 - 1842263 + G 74 -7.3 -4.07568 | overlap 1842233 ATAATACGCTGTGGT ATATCGGCGTGCCGG AAAA CCTGGACGCCGATGC TTTTGAGCAAACGGC TERM 2487 1842233 - 1842260 + G 72 -11.2 -3.08032 | overlap 1842230 ATACGCTGTGGTATA TCGGCGTGCCGG AAAA CCTGGACGCCGA TGCTTTTGAGCAAAC STY1952 1842160 - 1842504 + | hypothetical protein TERM 2488 1842566 - 1842532 - T 71 -7.2 -4.11216 | gap 2 TCTTCATCCTCAAAA CGCGCC-ACTAT-CCG TTCGC CGGTATGGTTGGCGCG AAGTTCGCCTGCCAC STY1953 1842689 - 1842510 - | hypothetical protein pabB 1842770 - 1844134 + | para-aminobenzoate synthase component I TERM 2489 1844336 - 1844311 - g 70 -9.7 -3.35046 | gap 1, overlap 1844309 TCATTTGCGCAAACA CGCCGG-ACAGG TCG CCTTTCCCGGCG GGGCCGTGGACAGTA STY1955 1844138 - 1844716 + | hypothetical protein TERM 2490 1845209 - 1845233 + G 89 -9.3 -4.63486 | overlap 1845203 GTAATGAACCCGCTA CCGTGGATATT GAT AGTATCCCCGG TTTTATTCGCGACGT sdaA 1844980 - 1846344 + | L-serine deaminase 1 TERM 2491 1846361 - 1846389 + F 100 -13.9 -5.10968 | overlap 1846362 CGCCATTTCCCCTCC CTTCGCCCATCTG CTA CGGATGGGCGAAA TTTTTATCTCTTCCT TERM 2492 1846362 - 1846388 + F 100 -17.4 -3.64954 | overlap 1846361 GCCATTTCCCCTCCC TTCGCCCATCTG CTA CGGATGGGCGAA ATTTTTATCTCTTCC TERM 2493 1847140 - 1847115 - g 89 -2.7 -5.63103 | gap 1 CCGGAATTAAAAAAA GATGAAGAGC GTTACCA GCT-TTCATC GCGGCATTTCCCTTT TERM 2494 1848055 - 1848003 - g 81 -12.5 -3.09635 | opp_overlap 1848002 1848040, overlap 1848050 ATGCCCATTAGCGAA TTTCCACAGTGGCTGGCGGGCAGCG CGC CGCCGCCCGCCCGGCATAACGGACA GATTATGTCCGCGAT STY1957 1846482 - 1848083 + | hypothetical protein STY1958 1849664 - 1848105 - | hypothetical protein TERM 2495 1850573 - 1850545 - g 100 -9.4 -4.86033 | overlap 1850547 AAACCGGTAGAAAAA GCCGCGCCAGCG CCGGT CGCCGCCGCGCC AAAAGCGGCCACGCC TERM 2496 1851022 - 1851012 - g 78 -6.8 -4.59853 | overlap 1851001 1851021 CGAAGCCTTTAAAAA GCTC AAC GAGC GCGGCATCGAGCTTG manX 1850137 - 1851105 + | PTS system, mannose-specific IIAB component manY 1851158 - 1851958 + | phosphotransferase enzyme II, C component TERM 2497 1852017 - 1852007 - g 79 -3.2 -5.28778 | overlap 1852008 ACCACCGAGAAAAAA CTCA CTC CGAG CGATATTCGCGGCGT TERM 2498 1852393 - 1852417 + G 72 -4.1 -4.81734 | opp_overlap 1852392, overlap 1852392 AGGTATTGCAATGAG CGGCAGCCTGC TTG GTCCGCTGCTG TTTTTCATCCTGTTT manZ 1851962 - 1852822 + | mannose-specific PTS system protein IID TERM 2499 1852857 - 1852838 - f 71 -10.6 -2.62184 | opp_overlap 1852839 GGCTGTTGTACACTA CCGGGGCC AAAC GGCCCCGT TTTTTTATTTCTCTG TERM 2500 1852839 - 1852856 + F 100 -14.1 -6.04953 | opp_overlap 1852838 GCTGTTGTACACTAC CGGGGCC AAAC GGCCCCG TTTTTTTATTTCTCT STY1962 1852881 - 1853339 + | hypothetical protein TERM 2501 1853390 - 1853405 + F 78 -6.2 -4.66537 | opp_overlap 1853390 TATTTCGAATCATAA TATAGC TAAG GCTATA TTTTCTATTGACCAA TERM 2502 1853482 - 1853456 - f 79 -8.2 -4.258 | TTATTGATGAATAAA TCTAAATGAAAA TCG TTTTCAATTAGA AGGCAAATAATATTT TERM 2503 1854280 - 1854302 + G 91 -12 -4.14392 | opp_overlap 1854279 1854278, overlap 1854281 GTACTGATAGGAATT GGCGTCCAGA TCC TCTGGACGCA TTTTCACGGTTAACG TERM 2504 1854281 - 1854301 + G 93 -15.5 -3.08314 | opp_overlap 1854279 1854278, overlap 1854280 TACTGATAGGAATTG GCGTCCAGA TCC TCTGGACGC ATTTTCACGGTTAAC STY1963 1853695 - 1854315 + | hypothetical protein rrmA 1855121 - 1854312 - | 23S rRNA methyltransferase A ftsI2 1856932 - 1855187 - | penicillin-binding protein TERM 2505 1856333 - 1856344 + g 74 -7.2 -4.15453 | ATCTTTACGCACCAG CCGG GAGC CCGG TTTTCCCGTCAGTTG TERM 2506 1856621 - 1856606 - G 71 -10.4 -3.18511 | opp_overlap 1856605 1856607 GAGAGACAGATGTAA GGCGCT GGCC AGCGCC TGCCAGCGCTCATTG TERM 2507 1856607 - 1856630 + g 79 -13.2 -2.82623 | gap 1, opp_overlap 1856606, overlap 1856605 AGAGACAGATGTAAG GCGCTGGCCAG CGC CTG-CCAGCGC TCATTGTAGCCAACG TERM 2508 1856867 - 1856846 - G 71 -7.3 -3.9461 | CCGCCCTAACAACAA TGCCATACT GAGC AGAATGGCA GTGCAAAGTAGTGCA TERM 2509 1857018 - 1857002 - R 85 -3.7 -5.47914 | AAAAACCAGAAAAAA CAATGCT AAT AACATCG CGCCTTTGCAACAAA TERM 2510 1857085 - 1857103 + r 87 -10.2 -4.128 | opp_overlap 1857085 ATATTGAATTAAAAA GCCCCGCT TTT AGCGAGGC TTTATATCTGAGGCT TERM 2511 1857103 - 1857085 - R 100 -12.4 -4.89009 | opp_overlap 1857085 ATATTGAATTAAAAA GCCCCGCT TTT AGCGAGGC TTTATATCTGAGGCT TERM 2512 1857175 - 1857159 - R 70 -9.5 -2.94099 | overlap 1857174 GGTGTCGATCAGATA GCTGTTA CGT TAACAGC AGCCGGACCTTTCTG cspC 1857361 - 1857152 - | cold shock-like protein CspC TERM 2513 1857216 - 1857234 + g 70 -6.7 -4.09739 | overlap 1857217 ATTTCGAACTCAACG TTCTGGC CTTCA GCCAGAG TTTTGAAACCATTGC STY1968 1857517 - 1857374 - | hypothetical protein TERM 2514 1857879 - 1857866 - R 71 -3.9 -4.88288 | overlap 1857871 CAAAATAATAGAAAA GAAAA GCGA TTTTC GACACCGCTTTTTGT TERM 2515 1857887 - 1857871 - R 75 -2.9 -5.26907 | overlap 1857866 TAATAGAAAAGAAAA GCGATTT TCG ACACCGC TTTTTGTGATGTTCT STY1969 1858453 - 1858166 - | hypothetical protein TERM 2516 1858224 - 1858240 + g 77 -3.5 -5.00765 | overlap 1858227 GGTTCGCTTGCCGCT GTTGCGG GTT CCGCTTC TTTTTCTGGTTCGTT TERM 2517 1858227 - 1858237 + g 87 -8.2 -4.58563 | overlap 1858224 TCGCTTGCCGCTGTT GCGG GTT CCGC TTCTTTTTCTGGTTC STY1970 1858667 - 1858524 - | hypothetical protein STY1971 1858820 - 1859059 + | hypothetical protein TERM 2518 1859240 - 1859218 - T 100 -9.2 -5.626 | opp_overlap 1859218 GATGTTATAAAAAAA GCAGCTAC GAAAAAT GTAGCTGC TTTTTTTTAACGTCA TERM 2519 1859218 - 1859240 + T 100 -9.9 -5.78622 | opp_overlap 1859218 GATGTTATAAAAAAA GCAGCTACG AAAAA TGTAGCTGC TTTTTTTTAACGTCA kdgR 1860062 - 1859271 - | transcriptional regulator KdgR TERM 2520 1860694 - 1860723 + r 75 -6.4 -4.45485 | gap 2, overlap 1860695 TCGTCGCCGTCTCTT CCGCCGCGG-G-TC CGAC GATCGCCGCGGCGA TTTTGTCCATCTCAT TERM 2521 1860695 - 1860722 + r 71 -9.9 -3.26568 | gap 2, overlap 1860694 CGTCGCCGTCTCTTC CGCCGCGG-G-TC CGAC GATCGCCGCGGCG ATTTTGTCCATCTCA TERM 2522 1861633 - 1861616 - R 100 -12.7 -5.42259 | opp_overlap 1861616 TCAGGCGTAAAAAAA GCGCGTC ATTC GACGCGC TTTTCATACTTGCCA TERM 2523 1861616 - 1861633 + r 95 -12.7 -4.3534 | opp_overlap 1861616 TCAGGCGTAAAAAAA GCGCGTC ATTC GACGCGC TTTTCATACTTGCCA htpX 1862539 - 1861658 - | heat shock protein HtpX TERM 2524 1862089 - 1862118 + g 70 -8.7 -3.73224 | gap 1, opp_overlap 1862097 GAATCAACGTCATCG TCA-CCATATCGCC ATT GGCAATATGGCTGA TTTCATGCGCAATGA TERM 2525 1862703 - 1862724 + r 95 -13.1 -3.69836 | opp_overlap 1862703, overlap 1862685 GCTTGTTAAAAAAAA CAGGCACAA TTTT TTGTGCCTG TTTAGCGTTACTTAT TERM 2526 1862724 - 1862703 - R 100 -13.1 -5.75342 | opp_overlap 1862685 1862703 GCTTGTTAAAAAAAA CAGGCACAA TTTT TTGTGCCTG TTTAGCGTTACTTAT prc 1864780 - 1862732 - | carboxy-terminal protease TERM 2527 1862911 - 1862923 + g 73 -9.1 -3.91564 | opp_overlap 1862904 CGTTAATACGCGCCA GACGC AGA GCGTC TTCTTCATTGTTCTC TERM 2528 1863605 - 1863634 + g 71 -4.3 -4.63542 | ACCGCCGTTTGAACG CAGATTGATAACG ATGC TGTTAACATTCTG TTTTTCCAGCTTCTG TERM 2529 1864429 - 1864412 - G 74 -10.5 -3.60792 | opp_overlap 1864412 1864412 CTGGTAACGTTCAAA CCGGCGC TTTT GCGCCAG GTTATAAAGATCGTA TERM 2530 1864749 - 1864724 - G 83 -14.8 -2.72344 | TTCCACGGCGAAGGA CTGGCCTGCT AATGCA AGCAGGCCAG CTAACGCGGTAAGCC proP 1865486 - 1864800 - | putative solute/DNA competence effector TERM 2531 1864994 - 1864961 - G 74 -7.3 -4.1043 | gap 1, opp_overlap 1864961 1864962 1864990 1864992, overlap 1864962 CTGAAATATCAGAAA CCGGCGTGTGCTTCTC TTC GCGAGGCGCACG-CGG CGCTTTCGTCGTCGG TERM 2532 1865048 - 1865090 + g 85 -9 -4.40561 | overlap 1865045 CAGCGCCTTCTTTAC GACGCGCTACCGGGCGAG GTTTACG CTCGCGTCGCGGCGCGTC TTCTTTTTCGCCAGC TERM 2533 1865109 - 1865123 + g 85 -4.9 -5.17576 | TTTTTCGCCAGCCGC CGCGG CAGCT TCGCG TTTTTTCGCTTGCTG STY1978 1866168 - 1865584 - | hypothetical protein TERM 2534 1866269 - 1866248 - gH 91 -3.8 -5.46657 | gap 1 CACGCCAACAAAAAA GCTAAC-GA TCAGG TCAGTTAGC GAAGCGCTGCCGCGC TERM 2535 1867145 - 1867158 + GH 75 -3.7 -4.83615 | opp_overlap 1867142, overlap 1867142 CAGCAGCAATATCGC CGTCG CCGC CGTCG TTTTTATCGCCAGTA STY1979 1866210 - 1867493 + | hypothetical protein TERM 2536 1867778 - 1867836 + GF 71 -9.5 -3.14211 | opp_overlap 1867778 1867783, overlap 1867765 1867808 CGTTGCGCGAAGAGA CGCAATTCTGGCTGGTGACGCCC-AAAGC CTC GCTGGCGGGCGTTTCCGGCCTGGAT-GCG TTGGTCGGCGGGAAT TERM 2537 1868922 - 1868952 + GF 74 -11.1 -2.79796 | overlap 1868924 TATTTTACCCGGTAC GAGCGGGAAGATG AAATC CACCTACCCGCTC TATGCTAACCTGGAA TERM 2538 1869632 - 1869654 + GF 79 -10.4 -3.59979 | opp_overlap 1869622 TTAACGTTGAGCCAG GACGCGGCGC GGC GCGGCGCGAC TTTGAACTGCAGGAA STY1980 1867456 - 1870095 + | hypothetical protein TERM 2539 1870102 - 1870127 + F 100 -12.5 -4.46926 | opp_overlap 1870097 1870099 1870102, overlap 1870103 1870116 CCACGTTAAACACCA GGCTCCGGCGT ACTC GCGCCGGAGCG TTTTATGCTACACTG TERM 2540 1870127 - 1870102 - f 77 -11.8 -2.85297 | opp_overlap 1870102 1870103 1870116, overlap 1870097 1870099 CCACGTTAAACACCA GGCTCCGGCG TACTCG CGCCGGAGCG TTTTATGCTACACTG TERM 2541 1870103 - 1870126 + F 100 -16 -3.27674 | opp_overlap 1870097 1870102 1870099, overlap 1870102 1870116 CACGTTAAACACCAG GCTCCGGCGT ACTC GCGCCGGAGC GTTTTATGCTACACT TERM 2542 1870818 - 1870808 - g 86 -6.8 -5.02074 | TGATGCGCTAAAAAA CTGG TCG CCAG AAAGTAATCTGGATA TERM 2543 1871297 - 1871308 + G 75 -5.8 -4.58395 | overlap 1871268 1871266 GATTGAATCACTGAT CGGA AAAG TCCG TTTTTCCCGGCTCGG yebU 1870173 - 1871612 + | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 2544 1871744 - 1871755 + G 74 -7.2 -4.13767 | opp_overlap 1871737 GATGAAAACCAGTGT GCGC ATTG GCGC TTTTGAAATCGACGA TERM 2545 1871826 - 1871836 + G 70 -6.8 -4.128 | opp_overlap 1871826, overlap 1871822 ACAATCCCCTGTAAA TCCG ATC CGGA TTTATGTATGCAACT STY1982 1871727 - 1871966 + | hypothetical protein TERM 2546 1871975 - 1871996 + F 78 -6.5 -4.55759 | opp_overlap 1871975 1871978, overlap 1871978 TGCCTGACTCAAAAA GAACCCGTC GCCA GGCGGGTTA TTTATTCTTCCTTTT TERM 2547 1871993 - 1871978 - f 72 -6 -4.44608 | opp_overlap 1871978 1871975, overlap 1871975 CTGACTCAAAAAGAA CCCGTC GCCA GGCGGG TTATTTATTCTTCCT TERM 2548 1871978 - 1871993 + F 79 -8.2 -4.34486 | opp_overlap 1871975 1871978, overlap 1871975 CTGACTCAAAAAGAA CCCGTC GCCA GGCGGG TTATTTATTCTTCCT STY1983 1872077 - 1872268 + | hypothetical protein pphA 1872937 - 1872287 - | serine/threonine protein phosphatase 1 TERM 2549 1872601 - 1872586 - G 84 -3.2 -5.42164 | overlap 1872587 GACAAAGAATAAAAA GCGC TTCAGCTT GCGC AGCGTGTTCAGCCGT TERM 2550 1873125 - 1873076 - R 100 -12.2 -4.66318 | opp_overlap 1873088, overlap 1873078 1873081 1873085 ATCATCGCAATAAAA TATAACTGACTGCACCAGGGGA GTGTTA TCCCCTGGCGCAGCGAGCTACT CACTATCACCTGTTC TERM 2551 1873123 - 1873078 - R 100 -17 -3.94438 | opp_overlap 1873088, overlap 1873076 1873081 1873085 CATCGCAATAAAATA TAACTGACTGCACCAGGGGA GTGTTA TCCCCTGGCGCAGCGAGCTA CTCACTATCACCTGT TERM 2552 1873120 - 1873081 - R 100 -16.5 -4.0865 | opp_overlap 1873088, overlap 1873078 1873076 1873085 CGCAATAAAATATAA CTGACTGCACCAGGGGA GTGTTA TCCCCTGGCGCAGCGAG CTACTCACTATCACC TERM 2553 1873116 - 1873085 - R 100 -18.1 -2.71742 | opp_overlap 1873088, overlap 1873081 1873078 1873076 ATAAAATATAACTGA CTGCACCAGGGGA GTGTTA TCCCCTGGCGCAG CGAGCTACTCACTAT STY1986 1873325 - 1873161 - | hypothetical protein TERM 2554 1873537 - 1873506 - H 100 -11 -4.75288 | TTATATTAAAATAAA TATGACGACGTTTT GTTA AAAGCGTCGCCATA AAAATGAATATATAG TERM 2555 1873841 - 1873856 + H 79 -3.2 -5.36441 | CGCCCCTGCCCCACC TGGAGT AAAT ACACCA TTTTTTATCTCCCCA TERM 2556 1874855 - 1874845 - H 76 -2.4 -5.41143 | TAGTGGTCAAAAAAA CGCG CTA CGAG AAATAATCAGTAACA TERM 2557 1875364 - 1875346 - g 100 -3.8 -6.01187 | opp_overlap 1875357, overlap 1875347 1875356 1875357 AATTAAACAAAAAAA CTCGACAA TAC TGGTCGAA AGACAACCAATTATT STY1988 1875015 - 1875410 + | hypothetical protein TERM 2558 1875580 - 1875564 - f 74 -10.9 -2.80074 | opp_overlap 1875562, overlap 1875559 TGCTCGACAACAGCA TCTCCTG GTG CAGGAGA AATGATATTCAAAGC STY1990 1875739 - 1876215 + | hypothetical protein STY1991 1877022 - 1876603 - | putative acetyltransferase STY1993 1877393 - 1877659 + | hypothetical protein STY1994 1877792 - 1877968 + | hypothetical protein TERM 2559 1878074 - 1878090 + F 74 -3.7 -5.02074 | overlap 1878068 GCCAGCCACCAGCTC TGGAG CGGTATA CTCCA TTTTTTGACGCATCC STY2000 1881004 - 1881918 + | hypothetical protein STY2001 1882051 - 1882209 + | hypothetical protein TERM 2560 1882378 - 1882389 + G 86 -3.6 -5.28942 | GCTGGCCTCATCATC GCCG GTTT TGGC TTTTTATTTAACCTC TERM 2561 1882809 - 1882799 - g 70 -6.8 -4.07568 | opp_overlap 1882807, overlap 1882801 TTGCCTTTCTGAAAA CAGG CCT CCTG ACGAGGACAGTTCTC STY2002 1882219 - 1882833 + | hypothetical protein STY2003 1883033 - 1883224 + | hypothetical protein TERM 2562 1883237 - 1883208 - T 77 -10.7 -3.34192 | opp_overlap 1883205 1883209, overlap 1883209 AATTGTCTGAAGTAA CTTCCCTGCAGCA TTGA CGCCGCAGGGAAT CTATTTATGGTGTAA TERM 2563 1883236 - 1883209 - T 83 -14.2 -2.60194 | opp_overlap 1883205 1883209, overlap 1883208 ATTGTCTGAAGTAAC TTCCCTGCAGCA TTGA CGCCGCAGGGAA TCTATTTATGGTGTA TERM 2564 1883209 - 1883236 + T 79 -11.3 -3.37299 | opp_overlap 1883209 1883208, overlap 1883205 ATTGTCTGAAGTAAC TTCCCTGCAGC ATTGAC GCCGCAGGGAA TCTATTTATGGTGTA yjcS 1885221 - 1883242 - | putative hydrolase TERM 2565 1883666 - 1883642 - G 75 -12.1 -2.90723 | GGACCTTTAACCACA CCGTTACGCAG CTC CTGCGCACCGG TCAGGTAGAAGTTAC TERM 2566 1885810 - 1885854 + G 90 -4.4 -5.30155 | opp_overlap 1885818, overlap 1885813 1885816 CGATCAGTGCACAGA CTGGAATACTGCCTTTAATA GACGA TATTATGGGCAGTATTATTG TTTTTTCGTTCCTGA TERM 2567 1885813 - 1885851 + G 81 -6.9 -4.72473 | opp_overlap 1885818, overlap 1885810 1885816 TCAGTGCACAGACTG GAATACTGCCTTTAATA GACGA TATTATGGGCAGTATTA TTGTTTTTTCGTTCC TERM 2568 1885816 - 1885848 + G 83 -8.6 -4.42047 | opp_overlap 1885818, overlap 1885813 1885810 GTGCACAGACTGGAA TACTGCCTTTAATA GACGA TATTATGGGCAGTA TTATTGTTTTTTCGT TERM 2569 1886028 - 1886040 + G 73 -6.2 -4.3767 | ATCCTTATGCTTACC GCGC TGGCT GCGC TTTATTATCATCTGC TERM 2570 1886657 - 1886679 + G 71 -9.8 -3.61398 | overlap 1886658 CATCACCCTTTCCAC AGCCGGTGAC ACT GTTACCGGCA TTATTGCCAGAGCGG TERM 2571 1886658 - 1886678 + G 79 -13.3 -2.76696 | overlap 1886657 ATCACCCTTTCCACA GCCGGTGAC ACT GTTACCGGC ATTATTGCCAGAGCG STY2005 1885617 - 1886747 + | hypothetical protein STY2006 1886884 - 1887057 + | hypothetical protein STY2007 1887428 - 1887201 - | putative DNA-binding protein TERM 2572 1888010 - 1887977 - R 100 -9.5 -4.81083 | overlap 1887979 CGGAATCAGGAAAAA TAGCCCAACCGGG AATATTCA CCCGGATGGGCTG ACAAAGAAATTTGTA TERM 2573 1888008 - 1887979 - R 95 -12.1 -4.02049 | overlap 1887977 GAATCAGGAAAAATA GCCCAACCGGG AATATTCA CCCGGATGGGC TGACAAAGAAATTTG TERM 2574 1888636 - 1888668 + r 87 -10.6 -4.18042 | overlap 1888619 ACGTCCATCAGCCAG CCGTGGCACGTTCT TGCAT ACGACGTGCTACGG TTTCATTTATCTCCG TERM 2575 1888943 - 1888911 - R 93 -14.2 -3.63627 | opp_overlap 1888910 GGTGGATACCTCAAA TTCTGACTGGCCGG ATAAG CCAGCCAGTCAGTA GTCGTTACCGTGACA TERM 2576 1889079 - 1889091 + r 73 -7.7 -4.07568 | opp_overlap 1889079 TCTGGGATTAATGTA TCTGG CGG CCAGA TTTTACACCACGGAA TERM 2577 1889374 - 1889392 + r 73 -7.6 -4.07968 | ATAAGTACAGTAGTT TTTTCTTT TCT AAAGAAAA TTTACTTATATCTTA STY2013 1889989 - 1889471 - | putative bacteriophage tail protein STY2014 1891515 - 1890004 - | putative bacteriophage tail protein TERM 2578 1890138 - 1890112 - G 73 -5.2 -4.56597 | gap 1, opp_overlap 1890113, overlap 1890116 GGCCTGTGTTAAAAA GCAACCAGCAG GCGCTT CTGCTGGTC-C ATATTCATCTACTTT TERM 2579 1890135 - 1890116 - G 73 -9.3 -3.80855 | opp_overlap 1890113, overlap 1890112 TGTGTTAAAAAGCAA CCAGCAG GCGCTT CTGCTGG TCCATATTCATCTAC TERM 2580 1891039 - 1891051 + g 80 -4.7 -5.03747 | overlap 1891033 1891040 GTTAACCCGCCGTGT CGCCG GGA CGGCA TTTTTTGCCAGATTT TERM 2581 1891455 - 1891421 - G 71 -5.7 -4.25104 | gap 2, opp_overlap 1891448, overlap 1891428 1891431 TTGCCCGCAGTAAAA CCAGAC-AGG-AGCGCC GGC AGCGCTTCCCAGTCAGG CTGTGATGTAACATT STY2015 1892195 - 1891515 - | putative bacteriophage protein STY2016 1893391 - 1892192 - | putative bacteriophage protein TERM 2582 1892913 - 1892934 + g 70 -6.5 -4.08692 | gap 1 GTGGTAATCGTCCCG GCAGGAGCTG CAA CCGCTCC-GC TTTTGGAACAAATTG STY2017 1893745 - 1893392 - | putative bacteriophage protein STY2018 1893898 - 1893761 - | putative bacteriophage protein TERM 2583 1893939 - 1893965 + r 78 -6.5 -4.62002 | gap 1, opp_overlap 1893939, overlap 1893934 TGTAGAAAGTAAAAA GCCCCGAAGTGT TAGC GCACC-CGGGGC TTTTGTCTGGTTGGT TERM 2584 1893965 - 1893939 - R 88 -8 -5.04601 | gap 1, opp_overlap 1893934 1893939 TGTAGAAAGTAAAAA GCCCCGAAGTG TTAGCG CACC-CGGGGC TTTTGTCTGGTTGGT STY2019 1894741 - 1893986 - | putative bacteriophage protein TERM 2585 1894779 - 1894764 - R 100 -7.5 -5.76633 | opp_overlap 1894764 1894763 CCAGACATAAAAAAA CCCGC TCATCG GCGGG CTTGGTATGGTAGTC STY2020 1895228 - 1894800 - | putative bacteriophage protein STY2021 1895959 - 1895228 - | putative bacteriophage protein STY2022 1896489 - 1896154 - | hypothetical protein STY2023 1897517 - 1896486 - | putative bacteriophage protein TERM 2586 1897236 - 1897225 - G 71 -5.8 -4.34402 | opp_overlap 1897225 CCGGTGACAGTAAAA CGGA TATC TCCG TTGAATATCATACCA STY2024 1897822 - 1897520 - | putative bacteriophage protein STY2025 1898476 - 1897826 - | putative bacteriophage protein TERM 2587 1898256 - 1898268 + g 70 -9.1 -3.65199 | AGCAGCGATCCGCCT CCGGA AAA TCCGG TTTCCATCACAACTT STY2026 1900428 - 1898476 - | putative bacteriophage protein TERM 2588 1899543 - 1899566 + g 71 -4.6 -4.56969 | gap 1, opp_overlap 1899542 1899539, overlap 1899550 CGACAACCAGACCAC CGATAACCTCT ATC AG-GGTTTTCG TTTCTTTATCCAGTT TERM 2589 1899550 - 1899560 + g 70 -3.2 -4.74219 | opp_overlap 1899542 1899539, overlap 1899543 CAGACCACCGATAAC CTCT ATC AGGG TTTTCGTTTCTTTAT TERM 2590 1900591 - 1900561 - R 82 -11.8 -3.36968 | opp_overlap 1900578 1900579, overlap 1900579 TATGGAAGGCGAGAA CCGGGCGAAGAATA AAA TCTTCACCGCCCGG CAGGCTGTTGAAGGT STY2027 1901058 - 1900606 - | putative bacteriophage protein STY2028 1901502 - 1901062 - | putative bacteriophage protein TERM 2591 1901242 - 1901271 + g 100 -7.1 -5.72622 | gap 1 CCAGGTTCCTGAGGA CTGACTCTGTGCGT TAT ACGC-CAGCGACAG TTTTTTGTTTGTCGG STY2029 1902659 - 1901514 - | putative bacteriophage protein TERM 2592 1902698 - 1902683 - R 79 -9 -4.07618 | CTCCGAAGAATGAAA CTGGTG CATC CACCAG CGATTTAATGCCGTA STY2030 1903211 - 1902663 - | putative bacteriophage protein STY2031 1903590 - 1903201 - | putative bacteriophage protein TERM 2593 1903560 - 1903550 - G 74 -3.2 -4.91712 | TTGAAGTCACAAAAA TCCG GGT CGAA AAGAACATCGGTTAC STY2032 1904131 - 1903577 - | putative bacteriophage protein TERM 2594 1903865 - 1903893 + g 75 -11.7 -2.92026 | opp_overlap 1903859 1903858, overlap 1903858 1903860 1903868 ACCATCAAGCGCAGC CTGTGCCGCAGCT TTA AGCTGTGGCATCG TCTGGTCTTCAACTG TERM 2595 1903868 - 1903890 + g 81 -14.2 -2.70232 | opp_overlap 1903859 1903858, overlap 1903858 1903865 1903860 ATCAAGCGCAGCCTG TGCCGCAGCT TTA AGCTGTGGCA TCGTCTGGTCTTCAA STY2033 1904535 - 1904128 - | putative bacteriophage protein STY2034 1904869 - 1904501 - | putative bacteriophage protein TERM 2596 1904590 - 1904618 + gr 73 -9.5 -3.38046 | overlap 1904588 GCGCCTGCAGGCTGT CGTTCTGCTCCTG CAG CTTGAGCAGAGCG TCTTTCAGATCGGCA TERM 2597 1904843 - 1904855 + gr 74 -3.3 -4.88405 | CGGGGTGTGAACATG GATGG TAA CCAGC TTTTCTTTCGCCATT TERM 2598 1904884 - 1904901 + r 88 -12.7 -3.56593 | TTTTTAGTTTCCTTC TGGCCCC TTTC GGGGCCA TTCTGGTTATCAGAT STY2035 1905852 - 1904911 - | putative bacteriophage protein STY2036 1906361 - 1905864 - | putative bacteriophage protein STY2037 1907598 - 1906366 - | hypothetical protein TERM 2599 1907014 - 1907027 + g 81 -3.7 -5.22258 | GATGGCCGTGCGCAT GCGGG TCCA CCAGC TTTTCTTTTGATTTG STY2038 1908143 - 1907613 - | hypothetical protein STY2039 1909704 - 1908238 - | hypothetical protein TERM 2600 1908870 - 1908901 + g 71 -4.4 -4.56597 | TTAGCGTCATGCCTT CATTGCTCTGAAAC TGTC GAATCAGATCAATG TTTTTCAGCAGCGCC STY2040 1911107 - 1909704 - | putative bacteriophage protein TERM 2601 1909797 - 1909817 + gr 86 -3.9 -5.37593 | overlap 1909799 1909800 AACGTTTGGTGACGG TATCTCGCG TTT TGCGAGGTC TTTTTTACTTTCGAC TERM 2602 1909799 - 1909815 + gr 74 -6.5 -4.31698 | overlap 1909797 1909800 CGTTTGGTGACGGTA TCTCGCG TTT TGCGAGG TCTTTTTTACTTTCG STY2041 1911822 - 1911073 - | putative bacteriophage protein TERM 2603 1911536 - 1911558 + gr 71 -7.7 -3.84266 | overlap 1911537 GGGTTAGTCGGGGGA TCGGTACGC ATTCC GCGTATCGG TTTCGTATCCAGTGT TERM 2604 1911633 - 1911661 + gr 78 -6.1 -4.57569 | TGGCAGGCTTTCTGC TGGTACGCA CTTTTCTTTTT TGCGTACCA TTTTTGCAAACCTGC STY2042 1912092 - 1911880 - | hypothetical protein STY2043 1912601 - 1912209 - | putative bacteriophage protein STY2044 1913061 - 1912585 - | putative endolysin STY2045 1913406 - 1913065 - | putative bacteriophage protein TERM 2605 1913529 - 1913510 - g 100 -12.1 -4.99435 | CCTAACAACGAAAAA GCCCCGG GACATG CCGGGGC CAGATGGAGTGCCAG TERM 2606 1913676 - 1913641 - g 72 -3.9 -4.79949 | GTCTGAAAAAAACAA GCCACAAGGTGAAAA TAAACC TCAGCACCCCGTGGC ACCAAAACCAACTCC STY2046 1913483 - 1913785 + | hypothetical protein TERM 2607 1913797 - 1913774 - T 88 -3.8 -5.80248 | overlap 1913776 GAACATATAAAAAAA CAGCCGAGAT AAAC ATCGCAGCTA CCGGAGCAAGGATGG STY2047 1914323 - 1913754 - | hypothetical protein TERM 2608 1913803 - 1913825 + g 86 -12.1 -3.87075 | opp_overlap 1913807 ATCGCAGCTACCGGA GCAAGGATG GTATA CATCCTTGC TTTATCGAGACTCGT TERM 2609 1914464 - 1914439 - R 89 -11.2 -4.12254 | opp_overlap 1914444, overlap 1914444 CAGTACCAGAAACAA CAAAACCCGC TCAATG GCGGGTTCTG GTAAAGTTCATGCGC TERM 2610 1914459 - 1914444 - R 88 -7.5 -5.05116 | opp_overlap 1914444, overlap 1914439 CCAGAAACAACAAAA CCCGC TCAATG GCGGG TTCTGGTAAAGTTCA STY2048 1915114 - 1914557 - | putative bacteriophage protein TERM 2611 1914615 - 1914605 - G 70 -5.4 -4.44667 | overlap 1914612 TCTGCGAACAACAAA CCAA CCA TTGG CTCTCGCCAGTTCCA TERM 2612 1915297 - 1915284 - R 100 -8.1 -5.2422 | opp_overlap 1915284 AACGATATGAAAAAA GACGC GGGC GCGTC TCATATCGCTCCGTA STY2049 1915393 - 1915298 - | hypothetical protein STY2050 1915941 - 1915387 - | hypothetical protein TERM 2613 1915715 - 1915734 + g 79 -2.8 -5.1861 | overlap 1915716 AAAAAAGCCTCAAGT TCAGGTTT GTCC AGACCTGC TTTTTTCATCCTCCG STY2051 1916228 - 1915938 - | putative bacteriophage protein TERM 2614 1916066 - 1916086 + g 71 -11.2 -2.91796 | overlap 1916059 1916057 1916056 AATCGTGGCATGAGC TGCAGGCA ATCGC TGCCTGCA TATCGTGTGGTTTTG STY2052 1916827 - 1916228 - | hypothetical protein STY2053 1917150 - 1916899 - | putative bacteriophage cohesive ends TERM 2615 1917316 - 1917303 - R 85 -5.9 -5.4505 | opp_overlap 1917303 GCGCGCAACAAAAAA CCCGC CGAA ACGGG TTAAGTGCGGGTGCG hokW 1917544 - 1917389 - | hypothetical protein mokW 1917601 - 1917389 - | host cell-killing modulation protein TERM 2616 1917515 - 1917530 + g 84 -9 -4.36411 | ACAGATGACGATCAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 2617 1917609 - 1917659 + H 100 -12.1 -4.64844 | gap 1, opp_overlap 1917576 CAAAGCATGAAATTG GCCTCAGATTAATGTTAAGCGTCT TGCC GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTATCTGCC STY2055 1917646 - 1917789 + | hypothetical protein TERM 2618 1917873 - 1917904 + T 84 -8.6 -4.62475 | opp_overlap 1917873 AACAACCAGTTAAGA GCTATCGGTGGGTG AATT CGCCCTGCGGTAGC TTTTCCTTTATGCAT STY2056 1919201 - 1917993 - | putative transposase TERM 2619 1919548 - 1919531 - g 77 -4.3 -4.94962 | ATAACTCAAAGAAAA TTATATA TGGT TATATAA AAGTTGGGAAATATG TERM 2620 1920045 - 1920061 + G 84 -8.7 -4.33151 | opp_overlap 1920044 AGTAAGCTTACAACT CGGCAGT CGG ACTGTCG TTTTCAATTATGATA STY2057 1919308 - 1920240 + | hypothetical protein STY2058 1920237 - 1920791 + | hypothetical protein TERM 2621 1920820 - 1920803 - T 85 -14.1 -3.0976 | opp_overlap 1920794 1920798 1920796, overlap 1920795 TTGAACAGCGGAACA GCCGCCC TTTT GGGCGGC CTCCTGATTATTTGA STY2059 1921297 - 1920890 - | putative bacteriophage protein TERM 2622 1921180 - 1921192 + g 70 -5.5 -4.37886 | AATTAACCTGATTAC GAGGG TCA TCCTC TTTTATCGGAAATAA STY2060 1921726 - 1921304 - | hypothetical protein STY2061 1922554 - 1921742 - | hypothetical protein STY2062 1923272 - 1922526 - | putative replication protein STY2063 1924067 - 1923279 - | hypothetical protein TERM 2623 1923681 - 1923701 + g 87 -8.3 -4.5852 | overlap 1923682 TTTTTGATCCGTTTG TGTAACGCT GGC AGCGTTACC TTTTCGTTTCAGTTC TERM 2624 1923682 - 1923700 + g 80 -11.8 -3.34028 | overlap 1923681 TTTTGATCCGTTTGT GTAACGCT GGC AGCGTTAC CTTTTCGTTTCAGTT TERM 2625 1923887 - 1923909 + g 76 -10.7 -3.76393 | GATCTATTGCACTTT TTGTAACGC CGCGA GCGTTACAA TTTGCATTACCGTCT TERM 2626 1924080 - 1924100 + r 93 -12.7 -3.68351 | CATTTGTTTTCACCT TGTAACGCT CGC AGCGTTACA TTTAACTGATACCGA STY2064 1924567 - 1924145 - | hypothetical protein STY2065 1924806 - 1924564 - | putative Cro repressor TERM 2627 1924768 - 1924779 + g 71 -5.8 -4.28375 | opp_overlap 1924755 AAGTTGTCTTTGAGA CAGC CCAA GCTG TTTTCGATATGTTGA STY2066 1924903 - 1925322 + | putative regulator TERM 2628 1925354 - 1925370 + F 100 -13.7 -5.26316 | opp_overlap 1925345 1925354 GTAATATGCCAATCA GCCCGCT ATC AGCGGGC TTTTTTGTACCATCA TERM 2629 1925370 - 1925354 - f 83 -13.7 -2.75535 | opp_overlap 1925354, overlap 1925345 GTAATATGCCAATCA GCCCGCT ATC AGCGGGC TTTTTTGTACCATCA STY2067 1925628 - 1925783 + | hypothetical protein TERM 2630 1925859 - 1925839 - g 77 -7.5 -4.30441 | overlap 1925840 CTAGAAGATGCAAAA CGCCTCCAG CAA CTGGAGCCA AATGCAGGCACTGAA TERM 2631 1925952 - 1925932 - g 83 -11.9 -3.71888 | AATGATAGCGAAGAA GCCTTCTAC AAA GCAGAAGGC CGTGCAGGATATTCA STY2068 1925785 - 1925988 + | hypothetical protein STY2069 1926261 - 1925965 - | hypothetical protein TERM 2632 1926467 - 1926485 + H 74 -5.8 -4.63184 | overlap 1926469 CATCAGTTCTACTCC GTGGCTGC CCT GCCGCCCC TTTTTAAAGTGAATT TERM 2633 1926823 - 1926804 - g 80 -5 -4.91109 | GCCTGACTACAAAAA CATGCATT TCTG ACTGCATG ATTAAAGTCTTCCTC kil 1926656 - 1926877 + | FtsZ inhibitor protein STY2071 1926877 - 1927047 + | putative bacteriophage protein TERM 2634 1927360 - 1927347 - g 100 -3.1 -5.93809 | gap 1 CCCGCAGAAAAAAAA GCC-GA ATT TCTGGC AACTCTGATTGCAAT racC 1927122 - 1927397 + | hypothetical protein TERM 2635 1927430 - 1927404 - f 91 -7.2 -5.49809 | overlap 1927408 GAAATCTGAAAAAAA GAAAGCCTGCAC ACT GTGCAGGCCTGA GTGAAGAACCTGGGA TERM 2636 1927426 - 1927408 - f 100 -14.6 -5.20328 | overlap 1927404 TCTGAAAAAAAGAAA GCCTGCAC ACT GTGCAGGC CTGAGTGAAGAACCT TERM 2637 1929662 - 1929636 - g 78 -2.3 -5.1861 | gap 1, overlap 1929638 GCCATCATTAAAAAA CA-CAATGCCAG TCTG CCAGCACTGATG ACACCAGAGCAGATG recE 1927497 - 1930625 + | exonuclease VIII STY2074 1930637 - 1931689 + | hypothetical protein lar 1931753 - 1931947 + | restriction alleviation and modification protein STY2075 1931940 - 1932128 + | hypothetical protein STY2076 1932235 - 1932516 + | putative excisionase TERM 2638 1932843 - 1932859 + GT 75 -6.5 -4.42976 | opp_overlap 1932816 1932843, overlap 1932856 TGACAGAAATAACCA CTCGCCA TAT TGCCGAG TTTCTTGATTTGTGG TERM 2639 1933332 - 1933318 - gT 84 -2.7 -5.31275 | CGGGATTAGAAAAAA CAGCC CTGAC GGCAG CATTCACCCGGATGG STY2077 1932482 - 1933558 + | putative integrase TERM 2640 1933723 - 1933697 - T 100 -11 -5.69379 | ATACAATTAAAAAAA GACCGAATAC GATTCCT GTATTCGGTC CAGGGAAATGGCTCT STY2078 1933872 - 1933756 - | hypothetical protein TERM 2641 1933914 - 1933887 - R 100 -8.5 -5.76633 | opp_overlap 1933887 TCAGAGATAAAAAAA CCGTAAGCCTT TTCGTG AAGGTTTACGG TTTTTTATTAAAAAT TERM 2642 1933887 - 1933914 + r 100 -11.4 -5.45652 | opp_overlap 1933887 TCAGAGATAAAAAAA CCGTAAGCCTTT TCGT GAAGGTTTACGG TTTTTTATTAAAAAT STY2079 1934286 - 1933933 - | hypothetical protein STY2080 1935178 - 1934303 - | putative cation transporter TERM 2643 1934622 - 1934591 - G 78 -2.3 -5.24129 | gap 1, overlap 1934595 GCCCGCCACAAAAAA GTGACCATAACGAG AAAAA CTCATCATGG-CGC TAATGGCATGTTGAC STY2081 1935559 - 1935179 - | hypothetical protein holE 1935691 - 1935921 + | DNA polymerase III subunit theta STY2083 1936029 - 1936685 + | hypothetical protein exoX 1936709 - 1937407 + | exodeoxyribonuclease X TERM 2644 1937434 - 1937408 - T 74 -8.7 -3.89291 | gap 1, opp_overlap 1937408, overlap 1937399 GGAACACCACAATAA CCCGCGAC-GCT CACA AGCCGTTGCGGG CGCGCGCGTCTATGC opdB 1939495 - 1937444 - | protease 2 yebE 1940368 - 1939709 - | hypothetical protein yebF 1940815 - 1940462 - | hypothetical protein TERM 2645 1940608 - 1940624 + g 91 -3.6 -5.56568 | TAACCCACGCGACCG GGTCAG CCTGC CCGACC TTTTTTTGGTCGTCT yebG 1941173 - 1940883 - | DNA damage-inducible protein YebG TERM 2646 1942377 - 1942391 + G 74 -11.4 -3.20345 | overlap 1942374 TGGTAAGCCTGAGAT CGACGG CAC CCGTCG TCTTGGTGTAGCGTT TERM 2647 1942462 - 1942452 - g 74 -4.6 -4.76312 | overlap 1942454 GATAAGAGCGAAAAA GGCC GCC AGCC GCGTGACGGTAAAAG purT 1941304 - 1942482 + | phosphoribosylglycinamide formyltransferase 2 TERM 2648 1942476 - 1942513 + T 80 -6.4 -4.83615 | gap 2, opp_overlap 1942477 1942478, overlap 1942477 1942477 CCGCGTGACGGTAAA AG-GCTAATG-CGCCATC GCCT GATGGCGACGTTAGCGCA TTTTTATCAGGCCTG TERM 2649 1942477 - 1942512 + T 75 -9.9 -3.49687 | gap 2, opp_overlap 1942477 1942478, overlap 1942476 1942477 CGCGTGACGGTAAAA G-GCTAATG-CGCCATC GCCT GATGGCGACGTTAGCGC ATTTTTATCAGGCCT TERM 2650 1942511 - 1942477 - T 73 -7.9 -4.13767 | gap 1, opp_overlap 1942477 1942476 1942477, overlap 1942478 CGCGTGACGGTAAAA GGCTAATG-CGCCATC GCCT GATGGCGACGTTAGCG CATTTTTATCAGGCC TERM 2651 1942510 - 1942478 - T 75 -11.4 -3.08046 | gap 1, opp_overlap 1942477 1942477 1942476, overlap 1942477 GCGTGACGGTAAAAG GCTAATG-CGCCATC GCCT GATGGCGACGTTAGC GCATTTTTATCAGGC edd 1945072 - 1943261 - | phosphogluconate dehydratase TERM 2652 1945227 - 1945202 - R 89 -5.4 -5.80364 | gap 1 AGTGTAATAAAAAAA GCCTCGCA-GG TGAAT CCACACGAGGC TTAAAAGTGCAAAAA zwf 1946782 - 1945307 - | glucose-6-phosphate 1-dehydrogenase hexR 1947124 - 1947993 + | DNA-binding transcriptional regulator HexR TERM 2653 1948207 - 1948173 - g 71 -12.2 -2.52543 | opp_overlap 1948185, overlap 1948182 1948185 1948195 AGGCCCGGCAACTGA CCGCGATAACAACCTT GAG AAGGTTATCGCCGCGG GCGCAAACGTAGTAC pykA 1948117 - 1949559 + | pyruvate kinase TERM 2654 1949605 - 1949630 + T 100 -14.9 -4.49958 | opp_overlap 1949609, overlap 1949609 CAGGGTTTGTCAGCA TAAAGCCTCTC TTAC GAGAGGCTTTA TTTATTTGATGGGAT TERM 2655 1949609 - 1949626 + T 100 -11.3 -4.80736 | opp_overlap 1949609, overlap 1949605 GTTTGTCAGCATAAA GCCTCTC TTAC GAGAGGC TTTATTTATTTGATG TERM 2656 1949626 - 1949609 - T 87 -11.3 -3.96148 | opp_overlap 1949609 1949605 GTTTGTCAGCATAAA GCCTCTC TTAC GAGAGGC TTTATTTATTTGATG msbB 1950603 - 1949632 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2657 1950256 - 1950272 + g 86 -3.7 -5.40072 | overlap 1950257 CTCCAGACCTTCCCA GTCAACA CGC TGTTGAA TTTTTTTCGGACCGC TERM 2658 1950705 - 1950679 - R 100 -10.8 -5.23292 | opp_overlap 1950681, overlap 1950681 GCACACAAAACAAAA CAGCCGGCACAC ATC GCGTACCGGCTC TGTCAACGCATTTGT TERM 2659 1950703 - 1950681 - R 95 -13.4 -4.22673 | opp_overlap 1950681, overlap 1950679 ACACAAAACAAAACA GCCGGCACAC ATC GCGTACCGGC TCTGTCAACGCATTT yebA 1952039 - 1950720 - | hypothetical protein znuA 1952999 - 1952055 - | high-affinity zinc transporter periplasmic component TERM 2660 1952582 - 1952597 + g 76 -5.4 -4.77036 | TATATTCGCCGTGAT GGTGAT GTAC GTCACC TTTTTCCTCATCGGC TERM 2661 1953452 - 1953438 - g 73 -5.6 -4.65895 | GCGCCCATGCAAAAA CTCTCC GGC GGTGAG ACACAGCGCGTACTG znuC 1953078 - 1953833 + | high-affinity zinc transporter ATPase znuB 1953830 - 1954615 + | high-affinity zinc transporter membrane component ruvB 1955704 - 1954694 - | Holliday junction DNA helicase B ruvA 1956324 - 1955713 - | Holliday junction DNA helicase motor protein TERM 2662 1956393 - 1956378 - R 79 -7.6 -4.47611 | opp_overlap 1956383 TATCATAAAAAAAGA CTGGAT GTTT ATCCAG ATGAAAAACACTTAT STY2104 1957358 - 1956684 - | hypothetical protein TERM 2663 1958178 - 1958158 - g 84 -9 -4.27316 | CTGTGGAATTGAAAA CCCTCAAC GCGAG GCTGAGGG AGAATAATTTAGCGC yebB 1957586 - 1958185 + | hypothetical protein ruvC 1958708 - 1958187 - | Holliday junction resolvase yebC 1959485 - 1958745 - | hypothetical protein TERM 2664 1959525 - 1959505 - R 79 -3.2 -5.40474 | gap 1, opp_overlap 1959506, overlap 1959506 ATTTCCTCAAAAAAA GCG-CGCCT TTTC AGGCGACGT TAATGACAAACTCTT ntpA 1959967 - 1959515 - | dATP pyrophosphohydrolase aspS 1961842 - 1960070 - | aspartyl-tRNA synthetase yecD 1962167 - 1962733 + | hypothetical protein TERM 2665 1962893 - 1962905 + G 80 -4.8 -5.01042 | opp_overlap 1962893 GGTATGCGCAAACTA CGGA CGATT TCCG TTTTTGCTTTAAATT TERM 2666 1963392 - 1963415 + G 74 -2.2 -4.98672 | opp_overlap 1963387, overlap 1963392 GTTGCAGAAACTCCC GCAGTGGCGG CAGA CCACCACGCC TTTTCTGTTTTTACA yecE 1962730 - 1963548 + | hypothetical protein TERM 2667 1963684 - 1963707 + G 88 -11 -4.11484 | gap 1, opp_overlap 1963681 CTTACGAATGCAGTA CCG-TGTCGCC TAT GGCGACGGCGG TTTTAGCGAATTGCA STY2112 1963601 - 1963996 + | hypothetical protein TERM 2668 1963995 - 1964011 + F 71 -3.6 -4.85782 | overlap 1963996 TTTTCTCCCTGTATT AGCGCA CAATA TGCGCC TTTATTTTTCCCGGA TERM 2669 1964702 - 1964682 - g 74 -6.7 -4.27886 | opp_overlap 1964683, overlap 1964683 GTGGAAACACATAAA GCGCGCCTG CGT CAGGCGGGT TTCGAACACAGCGAA TERM 2670 1964683 - 1964701 + G 74 -10.2 -3.53012 | opp_overlap 1964682 1964683 TGGAAACACATAAAG CGCGCCTG CGT CAGGCGGG TTTCGAACACAGCGA STY2113 1964037 - 1964780 + | hypothetical protein STY2114 1964777 - 1965748 + | hypothetical protein TERM 2671 1965861 - 1965828 - T 86 -10.9 -3.794 | overlap 1965829 CGGCAACGCAGCAAA TCCCCGGGAACGTAG GTAG CTACGTGACCGGGGT GCGCGAGGCGGCCAA TERM 2672 1965860 - 1965829 - T 87 -14.4 -2.87319 | overlap 1965828 GGCAACGCAGCAAAT CCCCGGGAACGTAG GTAG CTACGTGACCGGGG TGCGCGAGGCGGCCA TERM 2673 1965936 - 1965912 - T 100 -10 -5.71983 | TGAAGGAGAAAAAAA GGCCCCTG TTGAATTGG CAGGGGCC TGGTACGAGCAAGCA cutC 1966731 - 1965952 - | copper homeostasis protein CutC TERM 2674 1966268 - 1966278 + g 87 -8.2 -4.56775 | ATTGATAAACCTTGC GCCG CAT CGGC TTTTTGCCCGGAAGT TERM 2675 1966381 - 1966403 + g 71 -4.6 -4.67173 | overlap 1966382 GCGGTGGAATGTCAC CGCCAGCGGC CCG GCCGCCGCCA TTATTTTTTCCATTC TERM 2676 1966643 - 1966608 - G 76 -11.9 -3.02144 | opp_overlap 1966616 1966639, overlap 1966616 GTACGCTGCGTAAGA TGCCGAAAGAAGGCG TAAGCC CCCCTTCTTTCGGCG CGGCGCACAGTTCGA STY2116 1967320 - 1966751 - | hypothetical protein argS 1967557 - 1969290 + | arginyl-tRNA synthetase TERM 2677 1969314 - 1969342 + T 100 -14.6 -5.06414 | opp_overlap 1969311 1969308 TCGTTAACATCATCA GGCCTGACTCCG GGTAA CGGACTCAGGCC TTTTTATTGCCACAG TERM 2678 1970621 - 1970636 + T 75 -3.2 -5.10767 | CACTAAAGCGATTGA GGAATC TGCG GATACC TTTTTCTATTAGGTC TERM 2679 1970803 - 1970790 - T 73 -2.3 -5.24129 | opp_overlap 1970793, overlap 1970791 1970792 CGGGTCCATAAAAAA GCCTG GTAT CAGGG CGATACCATCTCTGT TERM 2680 1971273 - 1971248 - T 87 -10.3 -4.09685 | CTTGATTCTGGAAAA CGGCGGAAGCG ACGG CGTTACCGCCG CGCCCATCATGCGAA STY2120 1972540 - 1971404 - | hypothetical protein flhE 1973172 - 1972780 - | flagellar protein FlhE precursor flhA 1975250 - 1973172 - | flagellar biosynthesis protein FlhA TERM 2681 1973660 - 1973644 - G 74 -10.9 -3.5393 | AGGACTTTGTGTAAA GTCGTGA GGG TCACGAC GCCGGGGACCAGATC TERM 2682 1974239 - 1974251 + g 80 -4.7 -5.06414 | overlap 1974233 TTTTTACCGGCTGCG GCTCC TCC GGCGC TTTTTCTTCACGCCC flhB 1976394 - 1975243 - | flagellar biosynthesis protein FlhB TERM 2683 1975294 - 1975274 - G 74 -6.8 -4.36914 | opp_overlap 1975281 TTCTCGTTCATAAAA TCCAGCGC TTCTG GCACCGGA AGGTTCTCAGGTTGT TERM 2684 1975997 - 1976008 + g 71 -7.2 -4.06055 | AACATGCGCTTAATT CCCG GCAG CGGG TTTAATTTAGAAAAT TERM 2685 1976535 - 1976504 - R 100 -17.5 -3.10493 | GCGTTAATAGAGATA GCCGGATACGATA AGAAAG TATCGTATCCGGC CGGGTTGACGGATTC cheZ 1977232 - 1976588 - | chemotaxis regulator CheZ cheY 1977632 - 1977243 - | chemotaxis regulatory protein CheY cheB 1978699 - 1977650 - | chemotaxis-specific methylesterase cheR 1979562 - 1978696 - | chemotaxis methyltransferase CheR TERM 2686 1979015 - 1979039 + g 74 -7.1 -4.28774 | opp_overlap 1979015 CCGCGCATGAAGTAA CGTTGTAGCTG CTG CGGCGATAACG TTTTCAGTTCGCTGA TERM 2687 1979497 - 1979511 + g 71 -11.4 -2.88999 | opp_overlap 1979487 1979486, overlap 1979499 AAAATGCGCGTCGGA CAGCGC GAG GCGCTG TGTCATCTGTAACAA tar 1981384 - 1979723 - | methyl-accepting chemotaxis protein II TERM 2688 1980291 - 1980309 + g 95 -5.2 -5.42862 | opp_overlap 1980292, overlap 1980292 GCAATACCGTCGATA ACGCTGAT AAT GTCAGCGA TTTTTTTCGAACTGT TERM 2689 1980292 - 1980308 + g 73 -8.7 -3.84633 | opp_overlap 1980292, overlap 1980291 CAATACCGTCGATAA CGCTGAT AAT GTCAGCG ATTTTTTTCGAACTG TERM 2690 1981585 - 1981617 + r 100 -18.5 -3.61715 | opp_overlap 1981578 1981587, overlap 1981586 AAGCATAACGGTGAA TATTGCCGGATGGCG CGA CGCCATCCGGCAACG TTATTACGCGACGTG TERM 2691 1981586 - 1981616 + r 100 -19.8 -2.76815 | opp_overlap 1981578 1981587, overlap 1981585 AGCATAACGGTGAAT ATTGCCGGATGGCG CGA CGCCATCCGGCAAC GTTATTACGCGACGT TERM 2692 1981615 - 1981587 - R 100 -23.3 -3.07233 | opp_overlap 1981586 1981585, overlap 1981578 GCATAACGGTGAATA TTGCCGGATGGCG CGA CGCCATCCGGCAA CGTTATTACGCGACG cheW 1982124 - 1981621 - | purine-binding chemotaxis protein TERM 2693 1981667 - 1981677 + g 70 -3.2 -4.74706 | AGCGCCATCTCTTCG CTGT TAA GCAG TTTTTCGATATTCAC cheA 1984160 - 1982145 - | chemotaxis protein CheA TERM 2694 1982925 - 1982936 + g 83 -7.2 -4.60924 | GACAACATTTTTCCC CGCC TCAA GGCG TTTTTCCGGCATTTC TERM 2695 1983419 - 1983433 + g 70 -3.4 -4.6821 | CTGCCGGAGACGCTA CCGGTG CTA CCTCGG TTTTCTCTTGCGCTT TERM 2696 1983719 - 1983739 + g 73 -8.9 -3.85698 | overlap 1983720 1983732 CGCTCTCTTCCTGGA TCGCCGCAC TTA GTGCCGCGG TTTCTACGACCGCCG motB 1985094 - 1984165 - | flagellar motor protein MotB TERM 2697 1984592 - 1984604 + g 70 -6.9 -4.11216 | overlap 1984593 ATATACGGCTCAACT TCGGC GCT GCCGG TTTTAAACATCGGGC TERM 2698 1985031 - 1985058 + g 70 -6.9 -4.07687 | gap 1, overlap 1985026 1985033 AGGAACCGTGCGCCC CGCCGCCGTGCG GTTTG TGC-CTGCGGCG TTTTACGACGACAAT TERM 2699 1985033 - 1985043 + g 71 -8.2 -3.91897 | overlap 1985026 1985031 GAACCGTGCGCCCCG CCGC CGT GCGG TTTGTGCCTGCGGCG motA 1985978 - 1985091 - | flagellar motor protein MotA TERM 2700 1986079 - 1986056 - R 100 -15.4 -6.60575 | opp_overlap 1986052 1986051 AGGCAAAAAAAAAAA GCAGCGGTAA TGGC TTACCGCTGC TGGAGTGTTTGTCCA flhC 1986690 - 1986106 - | transcriptional activator FlhC flhD 1987037 - 1986687 - | transcriptional activator FlhD TERM 2701 1987321 - 1987302 - H 72 -5.8 -4.4009 | opp_overlap 1987302 GGCGATTTTAGAAAA TATGCGAT GCAG ATCACATA ATTTAACAGAATACT TERM 2702 1987492 - 1987512 + H 79 -4.1 -5.14698 | ATAGATAACAGGCTA TTATTTCTA TTT TAGAAACAA TTTTATTTTACCTTT STY2135 1987711 - 1987827 + | hypothetical protein yecG 1987824 - 1988219 + | universal stress protein UspC otsA 1989690 - 1988269 - | trehalose-6-phosphate synthase TERM 2703 1988370 - 1988357 - GT 72 -3.8 -4.71828 | opp_overlap 1988357 AGGTCATGAATAAAA CGCT CCTGCC AGCG GTTAATGTCATTTTT TERM 2704 1989632 - 1989584 - GT 73 -11 -2.70774 | gap 2, opp_overlap 1989620 1989624, overlap 1989583 1989612 1989620 CAGCCGAACCACAAC CCGCCAG-C-CGCTTTTAGCGCGC CAA GCACGCCAACAGCGAGGCCGCCGG CGCCGCCTTTATTAT TERM 2705 1989634 - 1989612 - GT 73 -11.2 -2.71364 | opp_overlap 1989620 1989624, overlap 1989583 1989584 1989620 TTAGCGCGCCAAGCA CGCCAACAGC GAG GCCGCCGGCG CCGCCTTTATTATCC TERM 2706 1989624 - 1989639 + gT 71 -6 -4.30719 | opp_overlap 1989583 1989584 1989612 1989620, overlap 1989620 GCACGCCAACAGCGA GGCCGC CGGC GCCGCC TTTATTATCCGGGGG otsB 1990468 - 1989665 - | trehalose-6-phosphate phosphatase TERM 2707 1989903 - 1989889 - G 81 -7.1 -4.82901 | CGTCGCCCACAAAAA CGGGA ATCCG TCCCG TAAAGGGCGCCTCCT TERM 2708 1990596 - 1990562 - R 74 -8.6 -3.91897 | gap 1, overlap 1990564 1990565 CTCGCCATTTAGAAA GACCATCGCCAGCCG GGGTAG CGGTTGGCGATGA-C GTGAAGCTATACTGT TERM 2709 1990595 - 1990564 - R 88 -12.3 -3.5511 | overlap 1990562 1990565 CGCCATTTAGAAAGA CCATCGCCAGCCG GGGTAG CGGTTGGCGATGA CGTGAAGCTATACTG TERM 2710 1990594 - 1990565 - R 83 -13.6 -2.72745 | overlap 1990564 1990562 GCCATTTAGAAAGAC CATCGCCAGCCG GGGTAG CGGTTGGCGATG ACGTGAAGCTATACT STY2140 1991659 - 1991102 - | hypothetical protein TERM 2711 1991486 - 1991473 - G 72 -3.7 -4.7373 | opp_overlap 1991474, overlap 1991474 CTACCGCATCAAAAA GCGCC TGCT GGCGT TCACTCAGCGTGCTG yecI 1992209 - 1992712 + | ferritin-like protein TERM 2712 1992897 - 1992873 - f 93 -11.7 -3.76607 | opp_overlap 1992878, overlap 1992887 1992888 GAACACACATTCAAA TTTAATGAAAC AAA GTTTCATTAAA TGAAAAGACGCTCAC STY2142 1993043 - 1993378 + | putative lipoprotein TERM 2713 1993363 - 1993384 + F 73 -10.9 -2.52464 | opp_overlap 1993362 1993360 1993359 1993379 CGTCCCGCAAATCAT GCCGCTTTA TTAT TAAGGCGGC TGGCTTAACGCCGAC TERM 2714 1993436 - 1993455 + F 87 -10 -4.35747 | TGCAGGGTCGCTATT GCCAGCAT GAAG GTGCTGGC TTTCCTTTATTTTTA ftnA 1993618 - 1994115 + | ferritin yecH 1994400 - 1994161 - | hypothetical protein TERM 2715 1994295 - 1994310 + g 75 -6 -4.63932 | TGTGAAATCGTGCCC GCTCGC CAAA GCGCGC TTTTATTGCCGCCTC TERM 2716 1995588 - 1995598 + G 71 -8.2 -3.786 | overlap 1995586 TGATTACCTTTCTGC CGCC GCT GGCG TTTGCGCTTTTCTAC TERM 2717 1995747 - 1995766 + G 85 -11.4 -4.03978 | GTGTGGCAGGCGGCA CGCCAGCG CTGG CGCTGGTG TTTATCTGCGGCATT tyrP 1994627 - 1995838 + | tyrosine-specific transport protein TERM 2718 1995886 - 1995850 - T 100 -18.1 -3.66874 | TTAACGCCAGGCAAA GATTACCGGGCCCGGAC GCC GTCCAGGCTCGATAATC ATCACGCTATGGCCG yecA 1996578 - 1995913 - | hypothetical protein STY2147 1996933 - 1996817 - | hypothetical protein STY2148 1997142 - 1996951 - | hypothetical protein STY2149 1998788 - 1997355 - | hypothetical protein TERM 2719 1997624 - 1997637 + g 72 -2.3 -4.87665 | opp_overlap 1997624 TGGTGAGATAATCGA TCCGC ATTT GGGGA TTTTTATGACTAAGA STY2151 1999208 - 1999008 - | hypothetical protein STY2152 1999338 - 1999201 - | hypothetical protein TERM 2720 1999543 - 1999530 - R 100 -8.1 -5.75599 | opp_overlap 1999530 GAAAGCACAAAAAAA CCACC CGTA GGTGG TTTCACGACACTGCT TERM 2721 1999629 - 1999649 + r 72 -10.5 -2.89742 | overlap 1999632 GCACAGCGCGAACGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 2722 1999757 - 1999772 + r 73 -7.6 -4.07885 | CCGCTTTGTTAACGC GCCAAA TTTT TTTGGC TTTTCAGCCAGCATC TERM 2723 1999845 - 1999861 + r 73 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA pgsA 2000587 - 2000039 - | phosphatidylglycerophosphate synthetase TERM 2724 2000487 - 2000476 - G 71 -4.4 -4.67943 | overlap 2000477 2000479 CGGCAATACAGAAAA TCAG CGCG CTGA CCATCGGCGCCCAGG uvrC 2002476 - 2000644 - | excinuclease ABC subunit C TERM 2725 2001057 - 2001069 + g 70 -6.9 -4.09864 | AAACGGCTTTCGCCT GGGCG AGC TGCCC TTTTCCGCCGTCGAT TERM 2726 2001390 - 2001438 + g 78 -6.5 -4.53303 | gap 1, opp_overlap 2001383 2001418, overlap 2001422 TGACTAAGGCCGTTG CCGCGTTG-GTCCGCGCTAGCT TGAGAT AGCGGGCGCGATCGCCGCGCGG TTTTGTCTGGACATG sirA 2003129 - 2002473 - | response regulator STY2156 2003441 - 2003596 + | hypothetical protein yecF 2003593 - 2003817 + | hypothetical protein TERM 2727 2003825 - 2003851 + T 88 -12.2 -3.63627 | opp_overlap 2003803 2003825 GCCAGTAGTAAAAAA CCGGCTGTTAGC ATC GCTTTCAGCCGG TTTCGCGTCTGGCGC TERM 2728 2003851 - 2003825 - T 100 -12.2 -5.1861 | opp_overlap 2003825, overlap 2003803 GCCAGTAGTAAAAAA CCGGCTGTTAGC ATC GCTTTCAGCCGG TTTCGCGTCTGGCGC sdiA 2004606 - 2003884 - | DNA-binding transcriptional activator SdiA STY2159 2005591 - 2004839 - | putative amino-acid ABC transporter ATP-binding protein YecC yecS 2006256 - 2005588 - | putative ABC transporter membrane protein STY2161 2007263 - 2006277 - | D-cysteine desulfhydrase TERM 2729 2007347 - 2007330 - R 89 -5.5 -5.67283 | gap 1, opp_overlap 2007330 AATGGAAATAAAAAA GGCGC-CG ATT CACGCGCC TCCGTTTGCTGACAT fliY 2008217 - 2007417 - | cystine transporter subunit fliZ 2008915 - 2008364 - | protein FliZ fliA 2009693 - 2008974 - | flagellar biosynthesis sigma factor TERM 2730 2009882 - 2009859 - R 87 -10.2 -4.04318 | GCCAGATAGGATAAA CGGGATGCGC AAAA GCCCACCCCG AACAAAACTATGTCA TERM 2731 2010134 - 2010155 + r 72 -5.9 -4.386 | overlap 2010134 TCGACATTCGGCTGG TTGGGGAAA TTAT TTTCCCAAA TTTTATAGAGAATTA TERM 2732 2011134 - 2011119 - R 100 -10.4 -5.26875 | opp_overlap 2011119 TCCGGAATTAAAAAA GGCAGC TTTC GCTGCC TTGATTGTGTACCAC TERM 2733 2011119 - 2011134 + r 79 -10.4 -3.49618 | opp_overlap 2011119 TCCGGAATTAAAAAA GGCAGC TTTC GCTGCC TTGATTGTGTACCAC fliC 2012693 - 2011173 - | flagellin TERM 2734 2012271 - 2012285 + g 71 -10 -3.55622 | GATGGTCAGGGTGTT GTCCTG CGC CAGGAC TTTCACGCCGTTGAA TERM 2735 2012824 - 2012839 + H 71 -7.5 -3.95555 | CGATCTTTTTCTTAG GCGGC GAAATA GCCGC TTTATGCATCATTAT fliD 2012950 - 2014353 + | flagellar capping protein fliS 2014368 - 2014775 + | flagellar protein FliS fliT 2014775 - 2015143 + | flagellar biosynthesis protein FliT TERM 2736 2015216 - 2015167 - f 100 -16.6 -4.25104 | opp_overlap 2015185, overlap 2015168 CGTCTCGTATGAAAA TTCTTCCATACTCCAGAGGTCG GCTAAA CGACTTCTGGAGCACGGAAGAT GAAAAACCCCACGTT TERM 2737 2015215 - 2015168 - f 100 -20.1 -3.14848 | opp_overlap 2015185, overlap 2015167 GTCTCGTATGAAAAT TCTTCCATACTCCAGAGGTCG GCTAAA CGACTTCTGGAGCACGGAAGA TGAAAAACCCCACGT TERM 2738 2015566 - 2015551 - g 74 -4.7 -4.8048 | GGCGCAGACGAAAAA GAACG TATTCG CGTTC AGCGCGTGAATCAGG amyA 2015215 - 2016699 + | cytoplasmic alpha-amylase TERM 2739 2016751 - 2016764 + T 82 -5.9 -5.24129 | opp_overlap 2016742, overlap 2016710 2016744 AAATTACGGCAGCGG CGTCG GCAG CGGCG TTTTTTCTAACGCGG yedD 2017152 - 2016739 - | hypothetical protein TERM 2740 2017056 - 2017070 + g 70 -7 -4.08945 | AGTACCCTTCCAGAC CGGCCG GCG CGGGCG TTTTCACCACATCAT TERM 2741 2017540 - 2017561 + G 80 -8.7 -4.20883 | opp_overlap 2017544 GCCGTGACGGGCGAA TTTACCCGC TGGG GCGGGCAAA TTTTGCAGCTTTTTG TERM 2742 2017791 - 2017815 + G 77 -4.1 -5.0133 | CTTCGGCGCGCGTCT GGCGATGGGGT GTA ACCTGGCCGCC TTTTTTACCGGGATC yedE 2017348 - 2018613 + | putative inner membrane protein yedF 2018610 - 2018843 + | hypothetical protein TERM 2743 2018849 - 2018877 + F 70 -9.5 -3.05597 | opp_overlap 2018846, overlap 2018848 TCAAAAATAAGCGCA TACTCCCGCTGTA CGT TACGGCGGGAGAC CTTTTACGGCATAAC STY2175 2019141 - 2019494 + | hypothetical protein fliE 2019928 - 2019614 - | flagellar hook-basal body protein FliE TERM 2744 2021391 - 2021406 + G 72 -2.5 -4.91109 | AGATCGAGGATTTAA CCCGT GAAGCG ATGGG TTTTTCTGATAAACG fliF 2020145 - 2021827 + | flagellar MS-ring protein TERM 2745 2021915 - 2021879 - g 84 -13.8 -3.03441 | gap 1 GACCATTGGCGAAGA CCGGGCGGCAGAGGTGT TTAA ACACCTCT-CCACCCGC GAAGTACAGGCGTTA fliG 2021820 - 2022815 + | flagellar motor switch protein G TERM 2746 2023431 - 2023482 + G 74 -10.3 -3.50393 | gap 3, opp_overlap 2023430, overlap 2023430 CGGCGGGTGTAAAGT CTCT-GCCGATGAG-GGCGAT-CTGG ACG CCAGCGTCGCCACTCGCTGGCAAGAG TTGTGTCGCCTGGCG fliH 2022808 - 2023515 + | flagellar assembly protein H TERM 2747 2023582 - 2023594 + G 73 -10.5 -3.3506 | overlap 2023573 AAATGGCGTTATTGC CGGCG GTG CGCCG TTATGGACGTTTAAC fliI 2023515 - 2024885 + | flagellum-specific ATP synthase fliJ 2024907 - 2025350 + | flagellar biosynthesis chaperone fliK 2025347 - 2026576 + | flagellar hook-length control protein TERM 2748 2026718 - 2026707 - g 84 -5.8 -5.1356 | opp_overlap 2026706 CGCGATTAACAAAAA GAGC AAAC GCTC GATTTGGATACCTTT TERM 2749 2026823 - 2026848 + G 90 -4.5 -5.31877 | opp_overlap 2026819, overlap 2026825 CGAACGCTAAAGCGG AACCGGCTCCG CCGC CCGCGCCGGTA TTTTTTGTGCTGGAT TERM 2750 2026825 - 2026846 + G 74 -7.1 -4.29153 | opp_overlap 2026819, overlap 2026823 AACGCTAAAGCGGAA CCGGCTCCG CCGC CCGCGCCGG TATTTTTTGTGCTGG fliL 2026681 - 2027148 + | flagellar basal body-associated protein FliL fliM 2027153 - 2028157 + | flagellar motor switch protein FliM TERM 2751 2028287 - 2028251 - g 86 -7.2 -4.73613 | gap 1, opp_overlap 2028254, overlap 2028252 CGACCACCAATAAAA GCGCCGCCGACGCGGTT TTCC AACAGCTT-GGCGGCGG CGATGTCAGCGGTGC TERM 2752 2028286 - 2028252 - g 73 -10.7 -3.43445 | gap 1, opp_overlap 2028254, overlap 2028251 GACCACCAATAAAAG CGCCGCCGACGCGGTT TTCC AACAGCTT-GGCGGCG GCGATGTCAGCGGTG TERM 2753 2028254 - 2028265 + G 74 -7.2 -4.08692 | opp_overlap 2028252 2028251 CCACCAATAAAAGCG CCGC CGAC GCGG TTTTCCAACAGCTTG fliN 2028154 - 2028567 + | flagellar motor switch protein FliN TERM 2754 2028615 - 2028641 + G 70 -9.5 -3.38727 | gap 1, overlap 2028615 2028637 ACCGCGCCAGCCGGA T-CGCCGCTCAT GCAG GTGAGCGGCGCA TTAATTGGCATTATT fliO 2028567 - 2028944 + | flagellar biosynthesis protein FliO TERM 2755 2029069 - 2029079 + G 74 -6.8 -4.26903 | opp_overlap 2029054 CTGGTCATTATCCGT CCAG ACG CTGG TTTTCATCACCTCGC TERM 2756 2029363 - 2029319 - g 95 -14.3 -3.18383 | opp_overlap 2029331 2029332 2029358 2029360, overlap 2029331 ATTTCTATGCAGGAA GCGCTGGATAAAGGCGCGCAA CCG TTACGCGCGTTCATGCTGCGC CAAACCCGCGAAGCC fliP 2028944 - 2029681 + | flagellar biosynthesis protein FliP fliQ 2029691 - 2029960 + | flagellar biosynthesis protein FliQ fliR 2029969 - 2030763 + | flagellar biosynthesis protein FliR rcsA 2031045 - 2031668 + | colanic acid capsullar biosynthesis activation protein A dsrB 2031904 - 2031707 - | hypothetical protein TERM 2757 2031848 - 2031870 + g 100 -16.2 -4.14392 | TGCCAGTACCACGCC CGGTCGGCGG GGA CCGCCGTCCG TTTTAACGGTTACCC yodD 2032030 - 2032257 + | hypothetical protein TERM 2758 2032294 - 2032274 - f 100 -12.5 -5.41746 | overlap 2032262 2032261 AATGGCCGAAAAAAA TCCCGGCCC TAC GGGTCGGGA TCAAACTTGCTTATG STY2193 2032567 - 2033382 + | mannosyl-3-phosphoglycerate phosphatase STY2194 2035064 - 2033361 - | hypothetical protein TERM 2759 2034425 - 2034405 - G 70 -8.9 -3.64703 | opp_overlap 2034383 2034395, overlap 2034387 2034383 CTGTGCGGAGGTAAA CCACCGCAC GCC GCGCTGTGG ATTACGCCGTTGGCT TERM 2760 2035223 - 2035204 - R 95 -12.8 -4.34402 | opp_overlap 2035204 TTCTCCACAGCAAAA CGCCCGGC ATTA ACCGGGCG TTTTGTCATCGGGCT TERM 2761 2035204 - 2035223 + r 100 -12.1 -4.4648 | opp_overlap 2035204 TTCTCCACAGCAAAA CGCCCGG CATTAA CCGGGCG TTTTGTCATCGGGCT STY2195 2035474 - 2035229 - | hypothetical protein TERM 2762 2036295 - 2036311 + H 81 -3.6 -5.40072 | overlap 2036283 GAGCGACAGGTCGTC CCCCAG TACGC CTGCGG TTTTTTTCGCGGCCA TERM 2763 2036471 - 2036486 + H 72 -3.2 -5.06414 | opp_overlap 2036451 2036466 AATGCCGAAACCGGC GGCG CGGGTCAA CGCC TTTTTATTCCAAAAG yedA 2036578 - 2037498 + | hypothetical protein vsr 2037957 - 2037487 - | patch repair protein TERM 2764 2037514 - 2037550 + g 76 -12.4 -3.02144 | gap 2, opp_overlap 2037505 2037504 ATGAATCCCCTGGGT GTCGATCTGCGCGCTGGC GCC GCC-GC-CGCAGATCCAC TCTTCCAGGCGCTCC dcm 2039368 - 2037938 - | DNA cytosine methylase TERM 2765 2038333 - 2038343 + g 71 -4.6 -4.62069 | overlap 2038330 CAAAACCGTTTCCCC GCGC CTG GTGC TTTTTCGCGTAGCGA TERM 2766 2038768 - 2038790 + g 76 -3.2 -5.06414 | opp_overlap 2038769, overlap 2038769 2038771 GAGTCTCGCAGGCAA AGCCGTGGGC GCG GCCCAGCGCA TTTTTCTTGGAAACG yedJ 2040137 - 2039442 - | hypothetical protein STY2202 2040528 - 2040217 - | hypothetical protein TERM 2767 2040255 - 2040271 + g 75 -5.7 -4.56597 | TTTCTGGCTGAGTGT CGGCGGG ATA CCCCCTG TTTTTGCGAGGCCGG TERM 2768 2040855 - 2040870 + H 100 -10.4 -6.2845 | opp_overlap 2040855 TCATTACCCACATTA CCGGCA TTTA TGCCGG TTTTTTTTTATGCTT TERM 2769 2040870 - 2040855 - H 71 -10.4 -2.65264 | opp_overlap 2040855 TCATTACCCACATTA CCGGCA TTTA TGCCGG TTTTTTTTTATGCTT ompS1 2041179 - 2042363 + | outer membrane protein S1 TERM 2770 2042380 - 2042404 + T 100 -17.9 -3.78934 | opp_overlap 2042383, overlap 2042383 ACGCTTTATGTTATT CAAGCCCGTGC TTA GCGCGGGCTTG TTATTATAGGGCAAG TERM 2771 2042383 - 2042401 + T 100 -13.8 -4.02817 | opp_overlap 2042383, overlap 2042380 CTTTATGTTATTCAA GCCCGTGC TTA GCGCGGGC TTGTTATTATAGGGC TERM 2772 2042401 - 2042383 - T 78 -11.6 -3.06796 | opp_overlap 2042383 2042380 CTTTATGTTATTCAA GCCCGTGC TTA GCGCGGGC TTGTTATTATAGGGC TERM 2773 2042614 - 2042600 - T 91 -7.1 -5.60993 | opp_overlap 2042600 CCGGGCATAAAAAAA GCTCC TGTAC GGAGC TAATATGAATTATTT TERM 2774 2042737 - 2042762 + T 71 -9.9 -3.21924 | gap 1, opp_overlap 2042743, overlap 2042743 CAAACGGGTTTTGCT CAGTAACATCGA ATG TCGATGTT-CTG TATTGTGAACCATGG TERM 2775 2042743 - 2042757 + T 72 -8.6 -3.72788 | opp_overlap 2042743, overlap 2042737 GGTTTTGCTCAGTAA CATCGA ATG TCGATG TTCTGTATTGTGAAC cspB 2043035 - 2042823 - | cold shock protein umuC 2044749 - 2043481 - | DNA polymerase V subunit UmuC TERM 2776 2043726 - 2043752 + g 71 -5.9 -4.37658 | gap 1 GCATCACCCCCGCTT TCTGGTAGCGAT GGCC GTCGC-GCCAGA TTTTATCCAGACATT umuD 2045171 - 2044752 - | DNA polymerase V subunit UmuD STY2207 2045459 - 2045298 - | hypothetical protein TERM 2777 2045353 - 2045365 + g 79 -7.7 -4.52857 | opp_overlap 2045352 GCATATTTAAGCCAG TCTGG AGG CCAGA TTTTCTGTACAGCGT TERM 2778 2046637 - 2046649 + G 71 -4.8 -4.63542 | overlap 2046642 CTCCACGTTTCCCGG CGCT ATGGC AGCG TTTTTGCCAGTTCTA STY2208 2045940 - 2046737 + | hypothetical protein TERM 2779 2046917 - 2046954 + T 76 -8.5 -4.053 | opp_overlap 2046925, overlap 2046921 2046925 TCAGAGGAGCCAGAT TTAGGAAAGCAGACGTT CACT GACGTCTGCTTTCTGCA TTTATATCAACTGAT TERM 2780 2046921 - 2046950 + T 90 -15.9 -2.73529 | opp_overlap 2046925, overlap 2046917 2046925 AGGAGCCAGATTTAG GAAAGCAGACGTT CACT GACGTCTGCTTTC TGCATTTATATCAAC TERM 2781 2046946 - 2046925 - T 83 -10.2 -3.78022 | opp_overlap 2046921 2046917 2046925 GCCAGATTTAGGAAA GCAGACGT TCACTG ACGTCTGC TTTCTGCATTTATAT TERM 2782 2046925 - 2046946 + T 89 -10.9 -4.04922 | opp_overlap 2046925, overlap 2046921 2046917 GCCAGATTTAGGAAA GCAGACGTT CACT GACGTCTGC TTTCTGCATTTATAT STY2209 2047163 - 2046987 - | hypothetical protein STY2210 2047339 - 2047166 - | hypothetical protein TERM 2783 2047362 - 2047374 + r 73 -4.1 -4.82901 | ATTAGATCAAAACTT CAACG CTT TGTTG TTTTTGTCAGCAAAC TERM 2784 2047966 - 2047923 - R 83 -13.2 -3.29461 | opp_overlap 2047927, overlap 2047926 2047927 GAAGCCGCGGCACAA TAAGGCCTTAGCGGGATGCA GAAT CACCTCCCGCTAAGGCTTCA TTCAACCACTTTCCA TERM 2785 2047963 - 2047926 - R 93 -12.7 -3.78934 | opp_overlap 2047927, overlap 2047923 2047927 GCCGCGGCACAATAA GGCCTTAGCGGGATGCA GAAT CACCTCCCGCTAAGGCT TCATTCAACCACTTT TERM 2786 2047927 - 2047962 + r 93 -14.8 -3.34192 | opp_overlap 2047927 2047926 2047923 CCGCGGCACAATAAG GCCTTAGCGGGATG CAGAATCA CCTCCCGCTAAGGC TTCATTCAACCACTT TERM 2787 2047962 - 2047927 - R 93 -16.2 -2.87146 | opp_overlap 2047927, overlap 2047926 2047923 CCGCGGCACAATAAG GCCTTAGCGGGATGCA GAAT CACCTCCCGCTAAGGC TTCATTCAACCACTT amn 2049493 - 2048039 - | AMP nucleosidase TERM 2788 2048247 - 2048224 - G 83 -8 -4.40003 | overlap 2048225 2048227 TGTCAGAAACACAAA GCAGCGTGCC GTAA GGCACGCGGA AGCGATAGCCCTGGG TERM 2789 2048246 - 2048225 - G 74 -11.5 -3.23279 | overlap 2048224 2048227 GTCAGAAACACAAAG CAGCGTGCC GTAA GGCACGCGG AAGCGATAGCCCTGG TERM 2790 2048244 - 2048227 - G 83 -12.7 -3.16835 | overlap 2048225 2048224 CAGAAACACAAAGCA GCGTGCC GTAA GGCACGC GGAAGCGATAGCCCT STY2212 2049539 - 2049700 + | hypothetical protein STY2213 2050015 - 2049689 - | hypothetical protein STY2214 2050395 - 2050009 - | hypothetical protein STY2215 2050472 - 2050392 - | hypothetical protein TERM 2791 2050829 - 2050802 - R 100 -11.2 -5.05782 | ATGGATGTCAAAAAA CCCGGCAGACCT TCTC AGGCCAACCGGG TAAAGATAAGTTCTT STY2216 2052566 - 2051109 - | hypothetical protein TERM 2792 2051188 - 2051172 - G 77 -7.9 -4.27617 | overlap 2051174 CAGACGCCAGTAAAA CAGTGCG CCA CGCACGG CCCAGTCAAGAAACA TERM 2793 2051186 - 2051174 - G 70 -9.1 -3.73756 | overlap 2051172 GACGCCAGTAAAACA GTGCG CCA CGCAC GGCCCAGTCAAGAAA STY2217 2052976 - 2052806 - | hypothetical protein erfK 2053956 - 2053027 - | hypothetical protein cobT 2055104 - 2054034 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobS 2055874 - 2055131 - | cobalamin synthase TERM 2794 2055456 - 2055415 - G 100 -10.7 -4.75472 | gap 1 GGTACATCAATAAAA CAGCGCTG-CCGCGTCCGGC CGC ACAGGCCGCCGCCAGCGCCG CCAACATTGGCGTTC cobU 2056416 - 2055871 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase cbiP 2057933 - 2056413 - | cobyric acid synthase TERM 2795 2057449 - 2057411 - G 76 -9.7 -3.86346 | gap 2, overlap 2057413 CCAGCGTGCCATAAA TAGCGGCGAATA-CG-CCG CCC CGGTCGATATCCGCCACCA GAATAACCGGACACT TERM 2796 2057428 - 2057413 - G 81 -11.8 -3.52113 | overlap 2057411 AGCGTGCCATAAATA GCGGCG AATA CGCCGC CCCGGTCGATATCCG cbiO 2058745 - 2057930 - | cobalt transporter ATP-binding subunit cbiQ 2059431 - 2058754 - | putative cobalt transport protein CbiQ TERM 2797 2058908 - 2058896 - G 71 -4.8 -4.56133 | overlap 2058891 CTGCAATAACCAAAA CGCA GCGTT TGCG CACGACGGATTGCCA TERM 2798 2059386 - 2059369 - G 76 -5.5 -4.81551 | opp_overlap 2059372 2059372, overlap 2059370 CAGCCACAGCAAAAA CTTGCGC TGCG GCGCAAC GTGTGCCCAGCGGCT cbiN 2059699 - 2059418 - | cobalt transport protein CbiN TERM 2799 2059941 - 2059928 - R 74 -3.7 -4.96848 | overlap 2059930 TCGCGCACAGAAAAA CGGCG ACAT CGCGG CGCAGTCCGGCACGG TERM 2800 2060213 - 2060198 - R 70 -2.4 -4.98911 | overlap 2060199 CAGGACAAAAATAAA CGCGCC GCAC AGCGCC AGCAGTACCTTCTGA cbiL 2061147 - 2060434 - | cobalt-precorrin-2 C(20)-methyltransferase TERM 2801 2060711 - 2060732 + g 77 -8 -4.07568 | opp_overlap 2060700 ATAACCGCCAGCGAT TGCCGTTC TATGGC GAGCGGCA TTTTCGCGCGGGCGG TERM 2802 2060835 - 2060823 - G 91 -4.1 -5.52384 | TCTGGAGTAAAAAAA TCCAG GTA CTGAA TAGCATCGCATCGCC TERM 2803 2061089 - 2061075 - G 79 -11.4 -3.68569 | opp_overlap 2061073 CCAGCGAGCCAAGAA TCCGCG CTG CGCGGA CGGTTATCAGGTCGG TERM 2804 2061203 - 2061216 + r 87 -9.5 -4.36914 | opp_overlap 2061188 2061201 GCGCGACAAACATCG CCCGG ATAG CCGGG TTTTCTCCCAGCCCG cbiH 2063452 - 2062727 - | precorrin-3B C17-methyltransferase TERM 2805 2062958 - 2062973 + g 78 -11.8 -3.28924 | opp_overlap 2062934 CAGATGCCCTTCGCG CCCGCG GCTG CGCGGG TTGTAAAAACAGATA cbiG 2064507 - 2063452 - | cobalamin biosynthesis protein CbiG TERM 2806 2063659 - 2063685 + g 76 -2.9 -5.03314 | CACGCGGCAGCAGGA GGCGAGCTG AATAAGCCC CGGCTCCCC TTTTTTGAGCGTGAC cbiF 2065261 - 2064488 - | precorrin-4 C11-methyltransferase cbiT 2065823 - 2065245 - | cobalt-precorrin-6Y C(15)-methyltransferase cbiE 2066418 - 2065813 - | cobalt-precorrin-6Y C(5)-methyltransferase TERM 2807 2066200 - 2066188 - G 75 -6.9 -4.40358 | ACCGATGCCATAAAA CAGCG GAT CGCCG GAGGCCAGCACCACG cbiD 2067551 - 2066412 - | cobalt-precorrin-6A synthase TERM 2808 2066492 - 2066509 + g 71 -6.2 -4.25104 | opp_overlap 2066503 AAGAAAACAGGATGG CGTCGC AGACAG GCGGCG TTTTGGTAAAACGCA cobD 2069000 - 2068041 - | cobalamin biosynthesis protein cbiA 2070421 - 2068997 - | cobyrinic acid a,c-diamide synthase TERM 2809 2069268 - 2069286 + g 77 -7.4 -4.34402 | opp_overlap 2069267 2069263 2069262 2069268, overlap 2069269 TCACAGTAACCAAAG CGGGTAAG TCG CTTACCCA TTTTGCTGTGACCGG TERM 2810 2069269 - 2069285 + g 71 -10.9 -3.2032 | opp_overlap 2069268 2069267 2069263 2069262, overlap 2069268 CACAGTAACCAAAGC GGGTAAG TCG CTTACCC ATTTTGCTGTGACCG TERM 2811 2070268 - 2070280 + g 95 -10.5 -4.56775 | opp_overlap 2070260 CTTTAAACGGCTGTA CGCGC AGC GCGCG TTTTTGCAGCAGCCT pocR 2071887 - 2070973 - | pdu/cob regulatory protein PocR TERM 2812 2071275 - 2071296 + g 89 -2.9 -5.48054 | opp_overlap 2071275 2071286 GATCGTCGGACAAAT GCGCATC AATATAGC GAAGCGC TTTTTTCATTTTACT TERM 2813 2072023 - 2071991 - R 86 -13 -3.36046 | gap 1, opp_overlap 2071991 2071996 2071997, overlap 2071997 AGTACAATGACAATA TCAAAA-GTCTCCCA TTGC TGGGAGACGTTTTGA TCAGTTCGTGAAAGC TERM 2814 2071991 - 2072023 + r 80 -13 -2.56596 | gap 1, opp_overlap 2071991 2071997, overlap 2071996 2071997 AGTACAATGACAATA TCAAAA-GTCTCCCA TTGC TGGGAGACGTTTTGA TCAGTTCGTGAAAGC TERM 2815 2071996 - 2072017 + r 79 -8.7 -4.31379 | opp_overlap 2071991 2071997, overlap 2071991 2071997 AATGACAATATCAAA AGTCTCCCA TTGC TGGGAGACG TTTTGATCAGTTCGT TERM 2816 2072016 - 2071997 - R 100 -12.2 -4.47259 | opp_overlap 2071996 2071991 2071997, overlap 2071991 ATGACAATATCAAAA GTCTCCCA TTGC TGGGAGAC GTTTTGATCAGTTCG TERM 2817 2071997 - 2072016 + r 81 -12.2 -3.18105 | opp_overlap 2071997 2071991, overlap 2071996 2071991 ATGACAATATCAAAA GTCTCCCA TTGC TGGGAGAC GTTTTGATCAGTTCG pduF 2072898 - 2072104 - | propanediol diffusion facilitator pduA 2073423 - 2073707 + | putative propanediol utilization protein PduA pduB 2073815 - 2074516 + | putative propanediol utilization protein PduB pduC 2074535 - 2076199 + | glycerol dehydratase large subunit TERM 2818 2076873 - 2076857 - g 83 -7.9 -4.59773 | overlap 2076859 CGTGACGGGCAAAAA CCCGCAG GAA CTGCGCG TGACGCTTTGATAAA pduD 2076210 - 2076884 + | diol dehydratase medium subunit TERM 2819 2077011 - 2076954 - g 72 -11.2 -3.14051 | gap 3, overlap 2076952 TGAGCCGCATGAACA GC-CTGCAGGGCGATGC-GCCAGCAGCGG CTC CTGCGGCAGGCGGCA-CGTCCCGCAGCGC AAAGGTCAGCGACTA TERM 2820 2077057 - 2077043 - g 70 -7.1 -4.15044 | CCGCTGGCGAACAAA CACCC GGAAT GGGTG AAAACCGCCACCAAT pduE 2076899 - 2077420 + | diol dehydratase small subunit TERM 2821 2078328 - 2078316 - g 86 -7.7 -4.82667 | CGATGAGACGAAAAA CATCG TCC CGATG GCGCGCGCGCTGATT TERM 2822 2078383 - 2078372 - g 74 -7.2 -4.07568 | CCGTGGTGGTTAAAA CGCC ATCC GGCG ACGTCAAAGCGCGCG TERM 2823 2078959 - 2078915 - g 70 -8.7 -3.71917 | gap 1, opp_overlap 2078915 ACCCTAAAGGTGAAA TCATCGCCACCCATCTCGCC GGGGCA GGCGACATG-GTCACGATGA TTATTGCCCGCGAAC pduG 2077627 - 2079459 + | PduG protein pduH 2079449 - 2079799 + | PduH protein pduJ 2079819 - 2080094 + | putative propanediol utilization protein PduJ TERM 2824 2080303 - 2080258 - g 71 -6 -4.26076 | gap 1, overlap 2080259 GGATGGTGATTAAAA TTGCCGGTGATG-TGGCCTCC GTGCA GGCGGCCATCACCACCGGTGC GCAATTTGCCGAACA pduK 2080098 - 2080580 + | putative propanediol utilization protein PduK pduL 2080580 - 2081212 + | hypothetical protein pduM 2081209 - 2081700 + | hypothetical protein pduO 2081988 - 2082998 + | hypothetical protein pduP 2082995 - 2084389 + | putative CoA-dependent proprionaldehyde dehydrogenase TERM 2825 2085253 - 2085272 + G 71 -4.8 -4.56597 | overlap 2085251 2085255 GCCAAACGCTACGCG CGGCTGGC CAAA GCCTGCGG TTTTTGCCCGGCAGA pduQ 2084401 - 2085513 + | putative propanol dehydrogenase pduS 2085537 - 2086865 + | putative ferredoxin pduT 2086868 - 2087422 + | putative propanediol utilization protein PduT STY2260 2087422 - 2087772 + | putative propanediol utilization protein PduU pduV 2087777 - 2088229 + | putative propanediol utilization protein PduV TERM 2826 2088488 - 2088501 + G 74 -2.3 -5.02074 | overlap 2088477 2088478 TGGGCCATCGTGTGG CGCAC GGCG GTGAG TTTTTTAAAGACTCG TERM 2827 2088810 - 2088792 - g 70 -6.6 -4.07568 | CGTTCTGGCTGAAAA GCTGGGCG TAC CACTCAGC GCATTACGGGTGATT TERM 2828 2089141 - 2089155 + G 74 -11.4 -3.17622 | overlap 2089139 GCCGAACGCATTCGC GCCACC ATT GGTGGC TATATTATGCAAATG STY2262 2088214 - 2089428 + | propionate kinase pduX 2089486 - 2090388 + | hypothetical protein TERM 2829 2090414 - 2090380 - T 79 -10.7 -3.53563 | ACAGGCGGGGTCAAA CTGCAGTGAGAGCCT GATAT ACGCTCCCACTGCCG TAGCGCATTATTCGG STY2264 2090757 - 2090422 - | hypothetical protein yeeA 2092060 - 2091002 - | hypothetical protein TERM 2830 2091690 - 2091712 + g 76 -2.8 -5.08824 | gap 1, overlap 2091690 ACGGCGAGCGTTATG CC-TATCAG TAGCGC CTGATACGG TTTTTTCCCTAAGGC TERM 2831 2092127 - 2092155 + r 76 -8.2 -4.07568 | gap 1, overlap 2092128 CAAAAATAGCGCACT G-GCGGACGGA ACACATTA TCCGTCCGCTC TTTTCAGCCAGGAAA TERM 2832 2092128 - 2092153 + r 86 -11.9 -3.63744 | overlap 2092127 AAAAATAGCGCACTG GCGGACGGA ACACATTA TCCGTCCGC TCTTTTCAGCCAGGA sbmC 2092646 - 2092179 - | DNA gyrase inhibitor TERM 2833 2092322 - 2092311 - G 90 -5.8 -5.23316 | GAGGACATCAAAAAA CCGT TCCC ACGG CTTCGCAAAGTCACG TERM 2834 2092988 - 2093000 + r 72 -9.1 -3.53091 | ATTTTGCTTTGATAT GCGGA ATT TCCGC TTTGGGCAGCGCCAT TERM 2835 2093906 - 2093887 - R 87 -10 -4.25104 | GGTTGGGGAGCAAAA CTTACGGC ATCG GCCGCAAG CGCAGGAGAAAGGTG TERM 2836 2094031 - 2094078 + r 75 -6.7 -4.42653 | gap 2, opp_overlap 2094035 2094036 2094046, overlap 2094034 2094035 2094037 2094041 TTAAACAAACATGGA TAAA-TT-GCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCTGACTTTA TTTTATGGATACGCT TERM 2837 2094034 - 2094074 + r 78 -5.6 -4.7878 | gap 1, opp_overlap 2094035 2094036 2094046, overlap 2094031 2094035 2094037 2094041 AACAAACATGGATAA ATT-GCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCTGAC TTTATTTTATGGATA TERM 2838 2094035 - 2094073 + r 70 -9.1 -3.46183 | gap 1, opp_overlap 2094035 2094036 2094046, overlap 2094034 2094031 2094037 2094041 ACAAACATGGATAAA TT-GCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCTGA CTTTATTTTATGGAT TERM 2839 2094072 - 2094035 - R 74 -8.5 -4.0056 | opp_overlap 2094034 2094031 2094035 2094037 2094041, overlap 2094036 2094046 ACAAACATGGATAAA TTGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCTG ACTTTATTTTATGGA TERM 2840 2094071 - 2094036 - R 78 -12 -2.99251 | opp_overlap 2094035 2094034 2094031 2094037 2094041, overlap 2094035 2094046 CAAACATGGATAAAT TGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCT GACTTTATTTTATGG TERM 2841 2094037 - 2094070 + r 93 -15.5 -2.86242 | opp_overlap 2094036 2094035 2094046, overlap 2094035 2094034 2094031 2094041 AAACATGGATAAATT GCAAGAAAATGTGAC ACAA GGCACATTTTCTTGC TGACTTTATTTTATG phsC 2094857 - 2094093 - | thiosulfate reductase cytochrome b subunit phsB 2095432 - 2094854 - | thiosulfate reductase electron transport protein PhsB phsA 2097723 - 2095447 - | thiosulfate reductase precursor TERM 2842 2097666 - 2097656 - G 77 -8.2 -4.07568 | GCCCCGGGCGGAAAA GCGC CCA GCGC GCAGGCAGAGCAGCC TERM 2843 2098088 - 2098076 - H 72 -4.8 -4.57341 | AATGCCGGCGAAAAA CGCT GGTTG AGCG TCGAAGCGGGTTTAT TERM 2844 2098240 - 2098225 - H 72 -5.4 -4.41616 | ACTTTCTGAAAGAAA CATGCC AGAT AGCATG GTGAATTGTGATCTC TERM 2845 2098553 - 2098538 - H 79 -2.6 -5.31275 | overlap 2098546 CGCTACCACAAAAAA TAAAAG AATT CTTTCA GCCGAAAGAAAAAAT TERM 2846 2098563 - 2098546 - H 82 -7.1 -4.75934 | overlap 2098538 CAAAAAATAAAAGAA TTCTTTC AGCC GAAAGAA AAAATACCTTAAACA TERM 2847 2100711 - 2100730 + H 79 -12.2 -2.91264 | opp_overlap 2100711 2100707 CCCGCATGAAATTAA GGGACACA GCGT TGTGTCCC TCTGTACATAGACCC TERM 2848 2100730 - 2100711 - H 88 -12.2 -3.56704 | opp_overlap 2100711, overlap 2100707 CCCGCATGAAATTAA GGGACACA GCGT TGTGTCCC TCTGTACATAGACCC sbcB 2101051 - 2102481 + | exonuclease I TERM 2849 2102487 - 2102505 + T 71 -9.6 -3.14132 | opp_overlap 2102486 2102490, overlap 2102490 GATTGTGTAATTGAC CAATGCCT GAC GGGCATTG TTAATCCAGAGCGGA TERM 2850 2102571 - 2102589 + T 100 -16 -4.4261 | opp_overlap 2102571 ATGGCAGACAAAAAA CCGGAGGC ACT GCCTCCGG TTTTACTATTGCCGA TERM 2851 2102589 - 2102571 - T 100 -16 -5.37043 | opp_overlap 2102571 ATGGCAGACAAAAAA CCGGAGGC ACT GCCTCCGG TTTTACTATTGCCGA yeeF 2103981 - 2102617 - | putative amino acid transporter protein TERM 2852 2104159 - 2104132 - R 100 -9.2 -5.63103 | opp_overlap 2104135 TTTGAAGCAAAAAAA TAACCGACGCGT ATTA AAACGTCGGTTA GTGTCATTTTTTGCA STY2278 2105175 - 2104261 - | putative transcriptional regulator TERM 2853 2105116 - 2105127 + g 77 -4.4 -4.83615 | overlap 2105111 TGCCGACGCCGCCGC GAAG CTGC CTTC TTTTTCTAACGCATC STY2279 2106045 - 2105221 - | hypothetical protein TERM 2854 2105934 - 2105951 + g 81 -8.4 -4.26076 | TCATACGGGCCGCTT CCACCC CGTCAA GGGTGG TTTTGCTGCCGGTAA hisL 2106208 - 2106249 + | his operon leader peptide TERM 2855 2106314 - 2106340 + F 100 -22.4 -6.06723 | opp_overlap 2106314 TGAACGCATGAGAAA GCCCCCGGAAGA TCA TCTTCCGGGGGC TTTTTTTTTGGCGCG TERM 2856 2106340 - 2106314 - f 100 -22.4 -3.99405 | opp_overlap 2106314 TGAACGCATGAGAAA GCCCCCGGAAGA TCA TCTTCCGGGGGC TTTTTTTTTGGCGCG TERM 2857 2107252 - 2107242 - g 71 -8.2 -3.89617 | opp_overlap 2107244 ATGGAGAAACTGAAA GCGC TTG GCGC CAGCTCGATTCTGGT hisG 2106396 - 2107295 + | ATP phosphoribosyltransferase TERM 2858 2107608 - 2107579 - g 93 -11.5 -4.44974 | gap 1 CTAAATTTGATAAAA CAGAAGTGACAGCG CTA CGC-GTCACCCCTG AAGAGATCGCCGCCG hisD 2107398 - 2108702 + | histidinol dehydrogenase hisC 2108699 - 2109778 + | histidinol-phosphate aminotransferase TERM 2859 2110567 - 2110591 + G 76 -10.7 -3.62096 | opp_overlap 2110567, overlap 2110569 CTACCGATGGATGAA TGTCTGGCGCG CTG CGCGCTGGATA TTTCCGGTCGTCCGC TERM 2860 2110569 - 2110589 + G 75 -11.1 -3.39018 | opp_overlap 2110567, overlap 2110567 ACCGATGGATGAATG TCTGGCGCG CTG CGCGCTGGA TATTTCCGGTCGTCC hisB 2109775 - 2110842 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 2110842 - 2111432 + | imidazole glycerol phosphate synthase subunit HisH TERM 2861 2111893 - 2111875 - g 84 -8.8 -4.25104 | CGGCTGGCAGGAAAA TTCCGGCG TCT CGCTGGAA CAACTGGTGGAGACC hisA 2111432 - 2112169 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 2112151 - 2112927 + | imidazole glycerol phosphate synthase subunit HisF TERM 2862 2112988 - 2112964 - g 84 -6.3 -5.03314 | overlap 2112965 TGGACTGGGAAAAAA CCGATGGCCTG ATG CCAGCCATCGT GCAACATGCGGTATC TERM 2863 2112987 - 2112965 - g 71 -9.8 -3.61506 | overlap 2112964 GGACTGGGAAAAAAC CGATGGCCTG ATG CCAGCCATCG TGCAACATGCGGTAT hisI 2112921 - 2113532 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 2864 2113568 - 2113534 - T 87 -14.4 -2.83073 | opp_overlap 2113544, overlap 2113544 AGCGTCATCAATAAG CGTAAAAAAACCGGGC AAT GCCCGGTTTTTTAATG AGAAATTTTACCTTT TERM 2865 2113544 - 2113558 + T 100 -12.8 -5.14563 | opp_overlap 2113534 2113544 ATAAGCGTAAAAAAA CCGGGC AAT GCCCGG TTTTTTAATGAGAAA TERM 2866 2113558 - 2113544 - T 100 -12.8 -5.48303 | opp_overlap 2113544, overlap 2113534 ATAAGCGTAAAAAAA CCGGGC AAT GCCCGG TTTTTTAATGAGAAA cld 2114596 - 2113613 - | polysaccharide chain length regulator TERM 2867 2113997 - 2114017 + g 74 -4.7 -4.77036 | GCGCAACGCTTCTTC GATTTGCTT AAT ACGCAGATC TTTTTGCTCCTGCGC TERM 2868 2114730 - 2114711 - R 70 -10 -3.10244 | opp_overlap 2114711, overlap 2114708 TTGGTCAATAAATCA TCGGGACT CATC AGCCCCGA TTGCCTTATTAATCA ugd 2115905 - 2114739 - | UDP-glucose 6-dehydrogenase TERM 2869 2116122 - 2116104 - R 100 -8.1 -6.06529 | TAGAGATAAAAAAAA GCCCAGT ATTAA ACCGGGC TTAAACAAGCTTGCA gnd 2117548 - 2116142 - | 6-phosphogluconate dehydrogenase rfbP 2119142 - 2117712 - | undecaprenyl-phosphate galactosephosphotransferase TERM 2870 2117994 - 2117984 - G 76 -5.4 -4.82667 | TTAGTACATTAAAAA GTTG TGG CAAC TCATCAAGGCTAGTT rfbK 2120647 - 2119214 - | phosphomannomutase rfbM2 2122073 - 2120634 - | mannose-1-phosphate guanylyltransferase rfbN 2123018 - 2122074 - | putative rhamnosyltransferase rfbU 2124080 - 2123019 - | putative glycosyltransferase TERM 2871 2124401 - 2124388 - R 73 -2.3 -5.26247 | GCAAAAGAAAGAAAA GTAGG GTTT CCGAC AAGCTCTAATTGCCA rfbV 2125656 - 2124655 - | putative glycosyltransferase rfbX 2126956 - 2125658 - | putative O-antigen transporter TERM 2872 2126260 - 2126248 - G 81 -4.1 -5.22794 | ATAAGGACGAAAAAA TCAGA AAC CCTGA TGAACGTGATAGTAA TERM 2873 2126340 - 2126316 - G 70 -9.5 -3.38812 | opp_overlap 2126318 2126320, overlap 2126314 TTCGCTTTAAGAACA TATATATACCG AAA CGATATATATA TAATGGGCAGTATTG TERM 2874 2127020 - 2127003 - R 78 -12.7 -2.71731 | opp_overlap 2126997 TTCATTCTTTAATTA TGCCCGC TTTC GCGGGCA GAAACATCATATAGA rfbE 2128043 - 2127027 - | CDP-tyvelose-2-epimerase rfbS 2128879 - 2128040 - | paratose synthase rfbH 2130227 - 2128914 - | putative dehydratase RfbH TERM 2875 2129734 - 2129747 + g 78 -6.7 -4.62475 | TTACCGAGTGTATGA GCGAT CATT ATCGC TTTTGATTTCTCAGT rfbG 2131333 - 2130254 - | CDP-glucose 4,6-dehydratase rfbF 2132111 - 2131338 - | glucose-1-phosphate cytidylyltransferase rfbI 2133101 - 2132127 - | CDP-6-deoxy-delta-3,4-glucoseen reductase TERM 2876 2132287 - 2132263 - G 78 -6.5 -4.53034 | overlap 2132266 TCTAGAGAATCAAAA TCATCCATCAC AGC ATGATGGACAA ATCCCTTTCTTCCCC TERM 2877 2132605 - 2132594 - G 71 -4.4 -4.59853 | GTAACTCCCCAAAAA TGAG CGAG CTCA TCTGACCATTGGGAA rfbC 2133658 - 2133107 - | dTDP-4-dehydrorhamnose 3,5-epimerase rfbA 2134537 - 2133659 - | TDP-glucose pyrophosphorylase TERM 2878 2134561 - 2134574 + r 74 -8.1 -3.89215 | opp_overlap 2134561 CTCATTCATAGAAAA TGCCC TTAT GGGCA TTTAAATTTATCAGA TERM 2879 2134574 - 2134561 - R 81 -8.1 -4.55287 | opp_overlap 2134561 CTCATTCATAGAAAA TGCCC TTAT GGGCA TTTAAATTTATCAGA rfbD 2135484 - 2134585 - | dTDP-4-dehydrorhamnose reductase rfbB 2136569 - 2135484 - | dTDP-glucose 4,6 dehydratase TERM 2880 2135889 - 2135913 + g 71 -8.6 -3.91911 | overlap 2135890 ATCGCGAATCTGATC CCCTTTGCCA TAAAT TGGCAAAGGC TTTCCTTCCAGTGCG TERM 2881 2135890 - 2135912 + g 75 -12.1 -2.94825 | overlap 2135889 TCGCGAATCTGATCC CCTTTGCCA TAAAT TGGCAAAGG CTTTCCTTCCAGTGC TERM 2882 2136724 - 2136705 - R 71 -7.8 -3.86897 | TCGACTTGTTACAAA CCTCGCCC AGCA GGGCAAAG CTCACTAAAACTTAA TERM 2883 2136903 - 2136852 - R 100 -10.1 -4.75518 | opp_overlap 2136852 TATACAAAACTAAAA CGGCAGTCAACACTCGTTTCAGC CAACTT GCCGCTTCGAATGTTCACTGCCG TTATTATGTTTATCA galF 2137839 - 2136946 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalF STY2309 2139420 - 2138017 - | putative colanic acid biosynthesis protein STY2310 2140651 - 2139431 - | putative glycosyltransferase TERM 2884 2140039 - 2140023 - G 71 -4.3 -4.63527 | overlap 2140024 GGACGATGGGAAAAA CGCGTCA TGT CGACGCC CATGCGCGAAACGGC wzxC 2143426 - 2141948 - | colanic acid exporter wcaJ 2144922 - 2143528 - | putative UDP-glucose lipid carrier transferase TERM 2885 2143588 - 2143575 - G 72 -2.4 -4.86033 | overlap 2143563 AAATCGTCAGAAAAA CGAT TTTGAT ATCG AACCAAATACTCCAT manB 2146346 - 2144976 - | phosphomannomutase manC 2147899 - 2146457 - | mannose-1-phosphate guanylyltransferase TERM 2886 2147319 - 2147342 + g 71 -10.2 -3.29144 | gap 1, overlap 2147302 2147301 CCGCTGGCGACGTAG GCCTGGGC-GG TTT CCAGCCCCGGC TTCTCAACGAACTGC TERM 2887 2147653 - 2147681 + g 76 -11.7 -3.01924 | opp_overlap 2147651 GCTCAAGAATAATGT TCTCCGTCAGCTT ATT GAGCTGGCGGAGC TGTTCGGCGACGATA wcaI 2149119 - 2147896 - | putative glycosyl transferase wcaH 2149595 - 2149116 - | putative O-antigen biosynthesis protein fcl 2150557 - 2149592 - | GDP-fucose synthetase TERM 2888 2150256 - 2150289 + g 74 -11.1 -3.24235 | overlap 2150254 CCGAGAAACAGCAGT TTGTTCACGTTGTGC AGGT GCGCGGCGTGAATAA TGTTGCTCTCTATCA gmd 2151681 - 2150560 - | GDP-mannose 4,6-dehydratase wcaF 2152259 - 2151705 - | putative colanic acid biosynthesis acetyltransferase WcaF wcaE 2153021 - 2152275 - | putative glycosyl transferase wcaC 2155439 - 2154222 - | putative glycosyl transferase TERM 2889 2154872 - 2154861 - G 73 -5.8 -4.41348 | overlap 2154863 GCTCGGCGAAATAAA CTGG CAGC CCAG CCGCAGCATGTCACG wcaB 2155924 - 2155436 - | putative colanic acid biosynthesis acetyltransferase WcaB TERM 2890 2155674 - 2155659 - G 80 -9 -4.19238 | opp_overlap 2155633 2155661 TGGCGAATGGTAAAA TCGTCG CCGG CGACGA CATGTTTGTTGATCA TERM 2891 2156837 - 2156856 + r 76 -4.8 -4.88687 | overlap 2156839 GGCCTACAGTCACAG GCCGCGCC ATCC GGCACGCC TTATTTTTTATTTGG wzc 2159023 - 2156864 - | tyrosine kinase wzb 2159469 - 2159020 - | tyrosine phosphatase wza 2160614 - 2159475 - | putative polysaccharide export protein TERM 2892 2159733 - 2159723 - G 74 -2.4 -4.99861 | GACGAATCACAAAAA TGCC GCT GGCG TTGGAGGTGGTCAGA TERM 2893 2160033 - 2160071 + g 70 -6.6 -4.1822 | overlap 2160034 GTTAATCGCATCCAG GACGGTTAGCGGGACGTT AGT AATGGCCTGCTGACCGGA TTTATTCACCTGGCC yegH 2161288 - 2162868 + | hypothetical protein TERM 2894 2162899 - 2162941 + T 86 -12 -3.53224 | gap 2, overlap 2162900 CCCGGCCTGCTTACC AGGCAG-GCCGGA-GGCGCG TTAGC CTCGCCATCCGGCTCTGCCC TTTGGCCAAAAACTA TERM 2895 2162900 - 2162940 + T 90 -15.5 -2.71791 | gap 2, overlap 2162899 CCGGCCTGCTTACCA GGCAG-GCCGGA-GGCGCG TTAGC CTCGCCATCCGGCTCTGCC CTTTGGCCAAAAACT asmA 2164810 - 2162954 - | putative assembly protein TERM 2896 2163440 - 2163457 + g 73 -5.5 -4.55128 | TTCAAGGCGCGTATT GCTCATG TCAA CATGCGC TTTTCCTTTCCAACT TERM 2897 2164364 - 2164339 - G 80 -8.9 -4.09685 | TTTCATGCTGGAAAA CCAGCACGCTG CCGG CAACGCGCAGG CTACGAATATCAAAC dcd 2165430 - 2164849 - | deoxycytidine triphosphate deaminase udk 2166162 - 2165521 - | uridine kinase TERM 2898 2167177 - 2167197 + G 95 -5.4 -5.31158 | gap 1 ATGTGGAGTGCGGTG CGCCTGCCG CGAA TGG-AGGCG TTTTTAATTTTTTTA yegE 2166493 - 2169483 + | hypothetical protein alkA 2170320 - 2169451 - | 3-methyl-adenine DNA glycosylase II yegD 2170454 - 2171806 + | putative chaperone TERM 2899 2171983 - 2172002 + F 86 -11.4 -3.71649 | overlap 2171993 2172001 CCTTTCCTTATTTTG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCA TERM 2900 2172007 - 2172032 + F 73 -11.3 -2.6737 | gap 1, overlap 2171993 2172005 2172001 TCGGGAGGGGCTTTC CCG-TTTCAGCA TCC TGCTGAAATCGG TGGCTTATCTTCATT TERM 2901 2172427 - 2172380 - g 83 -14.7 -2.80994 | gap 1, opp_overlap 2172421 CGCAAGCGCAGCATA CCGCCGCC-GCAGGTCGCCGCG GTATG CGCGACGGCCCTCTGGCGCCGG TACAGGCCGCGACCG STY2339 2172247 - 2173488 + | multidrug efflux system subunit MdtA TERM 2902 2174784 - 2174772 - g 84 -6.2 -5.1286 | opp_overlap 2174772 GAAAAAGGAGAAAAA CCGC TGGCG GCGG CGCTCAAAGGCGCGG TERM 2903 2176025 - 2176009 - g 91 -7.9 -5.1287 | TCGATACGGAAAAAA CGCTCGC CCT GCCAGCG GATATTACAACGCAG TERM 2904 2176063 - 2176092 + G 76 -9.9 -3.78934 | overlap 2176064 GCAGTACGCTCGCCT TCCAGGCGGCGCT GGGC AGCACCGTCTGGC TTATTGTCGCCGCCG TERM 2905 2176064 - 2176091 + G 81 -13.4 -2.87146 | overlap 2176063 CAGTACGCTCGCCTT CCAGGCGGCGCT GGGC AGCACCGTCTGG CTTATTGTCGCCGCC yegN 2173488 - 2176610 + | multidrug efflux system subunit MdtB TERM 2906 2179386 - 2179370 - g 76 -3 -5.07486 | gap 1, opp_overlap 2179370 2179372, overlap 2179352 2179372 CATTGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTTGAAG STY2341 2176611 - 2179691 + | multidrug efflux system subunit MdtC TERM 2907 2180512 - 2180530 + G 86 -12.4 -3.86015 | overlap 2180502 TTTTGCCGGGCGTAT CGGCAGCG GTA TGCTGCCG TTTATGACGCCGGTC TERM 2908 2181012 - 2181032 + G 73 -5.5 -4.57569 | TATGTATGGCGGTTA TTATCGC GCTACCG GCGATAA TTTTTGCCCGCGTGC yegB 2179688 - 2181100 + | multidrug efflux system protein MdtE TERM 2909 2181623 - 2181645 + G 72 -4 -4.7254 | overlap 2181625 TCGTGGCGTTATCAA CCTTGCTGGC CGC GCTGGCGACG TTTTTGCTGGCGCGT baeS 2181100 - 2182503 + | signal transduction histidine-protein kinase BaeS baeR 2182500 - 2183222 + | DNA-binding transcriptional regulator BaeR STY2345 2183491 - 2183793 + | hypothetical protein TERM 2910 2183908 - 2183896 - g 79 -3.3 -5.1861 | overlap 2183897 CGGAGCATCAAAAAA TGCAG CAC CTGCG TGAACAAGGTTGGTA TERM 2911 2184482 - 2184506 + G 75 -12.8 -2.55818 | overlap 2184474 ACAGTGGCTGCTGCT GCACAGCGCC CCGGA GGCGCTGCGC TACCTTCAGGTTGTT STY2346 2183793 - 2184677 + | hypothetical protein TERM 2912 2184760 - 2184740 - g 100 -4.6 -6.2845 | overlap 2184744 AACTACAAAAAAAAA CAAACCGC TGATT GCGGCCCG TATCGCCGAGGAGAA TERM 2913 2184756 - 2184744 - g 100 -6.2 -5.48106 | overlap 2184740 ACAAAAAAAAACAAA CCGC TGATT GCGG CCCGTATCGCCGAGG TERM 2914 2184999 - 2184965 - g 86 -10.6 -4.18018 | GGGCTTGAGCGAAAA CCTCAACGGCGCGGCG TTA CGCCACAAGGTCGAGG ATATCTTACGCCGCT TERM 2915 2185021 - 2185046 + G 75 -6.8 -4.49981 | gap 1 TACGCCGCTGGCCTG CGGGCATCGGC AGCTC GCCGA-GCACG TTTTATCATCATCTG STY2347 2184687 - 2185394 + | hypothetical protein TERM 2916 2185477 - 2185461 - g 72 -2.1 -4.98255 | overlap 2185462 GTGCAACCACAAAAA TCCCCTC AAT GACGGGC AACGAGAGTGGCATA STY2348 2185405 - 2187516 + | hypothetical protein TERM 2917 2188098 - 2188088 - g 70 -6.8 -4.208 | overlap 2188081 CTGGAAAACGATAAA GCCA TCG TGGC GCTTCGGGAAGGCGA STY2349 2187521 - 2188240 + | hypothetical protein STY2350 2189107 - 2188394 - | hypothetical protein STY2351 2189652 - 2189209 - | hypothetical protein TERM 2918 2189262 - 2189274 + g 91 -7.7 -5.09895 | opp_overlap 2189262 2189255 2189253 GTAAAATATAAACAG CTGCA TCG TGCAG TTTTTTACATAGATC STY2352 2190217 - 2189768 - | hypothetical protein TERM 2919 2189856 - 2189842 - G 91 -7.2 -5.1356 | CTCTACCAATAAAAA CAAACA TTA TGTTTG TTGACAATACTATCA TERM 2920 2190021 - 2190038 + g 79 -2.8 -5.1963 | opp_overlap 2190036, overlap 2190028 CATTCTCCATCATCA TTCTTT GTAAAA AAAGAA TTTTTATTCGTTGCC TERM 2921 2190047 - 2190036 - G 84 -3 -5.40072 | opp_overlap 2190021 2190028 TTCTTTGTAAAAAAA GAAT TTTT ATTC GTTGCCGCATCTGTG TERM 2922 2190253 - 2190241 - R 77 -3.5 -5.16681 | CCAAAAAGAATAAAA TAATT ATC AATTA ATCATCTCCTGAAAT STY2353 2190764 - 2190285 - | hypothetical protein TERM 2923 2190408 - 2190420 + g 74 -4.8 -4.78326 | overlap 2190404 2190415 ATTTATAAAATCATC GCCA CATGA TGGC TTTATTTCTTTAAAG STY2355 2191476 - 2190874 - | hypothetical protein STY2356 2191823 - 2191545 - | hypothetical protein STY2357 2192488 - 2191793 - | hypothetical protein STY2358 2193059 - 2192559 - | hypothetical protein STY2359 2193492 - 2193190 - | hypothetical protein TERM 2924 2194240 - 2194226 - R 79 -2.9 -5.28561 | opp_overlap 2194226 AACATATAACAAAAA TATGT TCACG ACATA TCCATTTAATATTTT STY2361 2194718 - 2194299 - | hypothetical protein TERM 2925 2194891 - 2194876 - R 80 -6.2 -4.77165 | opp_overlap 2194876 TTTTTCATAATAAAA TCTACT AATA AGTAGA TTCAATGGATTCCAT STY2362 2195056 - 2194958 - | hypothetical protein STY2363 2195350 - 2195153 - | hypothetical protein TERM 2926 2195228 - 2195239 + g 84 -5.8 -5.0917 | AATGCATGTTGCCGA GGTG ATTT CACC TTTATTTTTTAGTGA STY2364 2195992 - 2195375 - | hypothetical protein TERM 2927 2196797 - 2196780 - g 71 -6.3 -4.34008 | overlap 2196796 CAGGAAGGAAAAGAA GACGTTG TCGG CAACATC GTGCATAAGCATGAA STY2365 2196156 - 2197517 + | putative protease TERM 2928 2197651 - 2197682 + T 100 -9.5 -5.13473 | overlap 2197654 CCAGGAACCACCTCC TTGGCCTGCGTAA TCTCCC TTACGCAGGCTTA TTTTTTGCGTATAAT TERM 2929 2197654 - 2197679 + T 100 -13.4 -4.65666 | overlap 2197651 GGAACCACCTCCTTG GCCTGCGTAA TCTCCC TTACGCAGGC TTATTTTTTGCGTAT STY2366 2198574 - 2198158 - | hypothetical protein STY2367 2199031 - 2198696 - | hypothetical protein STY2368 2199512 - 2199396 - | hypothetical protein TERM 2930 2200078 - 2200064 - R 74 -8.5 -3.99805 | opp_overlap 2200063 CCGGAAAAACTTAAA GCCGC GTTGG GCGGC GTCTCCTATCTTATT TERM 2931 2200511 - 2200532 + r 100 -11.6 -4.78572 | TAACACCAGTCGCTG GCCGGATG CGCTCA CATCCGGC TTTTCTTCGTTGAAC fbaB 2201600 - 2200548 - | fructose-bisphosphate aldolase TERM 2932 2201960 - 2201948 - g 83 -6.2 -4.87803 | TATGGCTAAATAAAA GCGG GTTTT CCGC CGGTGAAATAGGCTG TERM 2933 2202020 - 2202041 + G 90 -5.1 -5.24129 | overlap 2202012 2202021 TCCTGTCGCCGATTC TGGTCGG CTCCGTTA CCGACCG TTTTTTCTCAGCGCA TERM 2934 2202474 - 2202490 + G 77 -3.7 -4.99312 | GCTGGTTCTGCTGCG CGATAAA AAC TTTCTCG TTTTCTTCTTCTGTT TERM 2935 2202600 - 2202582 - g 77 -4.5 -4.86621 | opp_overlap 2202591 AGTGGGAATGAAAAA CGCCACC GGCTG GATGACG CTCGGCCAGTTCTCT TERM 2936 2202704 - 2202714 + G 81 -2.4 -5.4251 | overlap 2202695 TTATTACCGCCGCGA TCCG CTA CGGC TTTTTTGTCTATGGC STY2371 2201854 - 2203125 + | putative nucleoside permease STY2372 2203122 - 2204126 + | putative hydrolase STY2373 2204123 - 2205088 + | putative sugar kinase STY2374 2205808 - 2205062 - | GntR family transcriptional regulator thiD 2206644 - 2205844 - | phosphomethylpyrimidine kinase TERM 2937 2206299 - 2206310 + g 74 -7.2 -4.08216 | opp_overlap 2206299, overlap 2206297 CAGAGGGCGAGAGCA GCGG ATCG CCGC TTTTCGCCAGCATCA STY2376 2207428 - 2206631 - | hydroxyethylthiazole kinase yohN 2207838 - 2208152 + | hypothetical protein TERM 2938 2208178 - 2208158 - T 100 -8.2 -5.64274 | opp_overlap 2208174, overlap 2208159 TCATCGATAAAAAAA GCCCCCTC ATCCA GAGGGGGA AATACAGCCCCATGT TERM 2939 2208177 - 2208159 - T 95 -11.7 -3.9748 | opp_overlap 2208174, overlap 2208158 CATCGATAAAAAAAG CCCCCTC ATCCA GAGGGGG AAATACAGCCCCATG TERM 2940 2208334 - 2208367 + T 70 -8.9 -3.36785 | opp_overlap 2208330 2208327, overlap 2208335 TGCAGAAAGATTGTC ATCCCGGTCACTTAT TATT GTAAGTGACCGGAAG TTCATTCACCTATCG TERM 2941 2208335 - 2208366 + T 78 -12.4 -2.6175 | opp_overlap 2208330 2208327, overlap 2208334 GCAGAAAGATTGTCA TCCCGGTCACTTAT TATT GTAAGTGACCGGAA GTTCATTCACCTATC stcD 2209421 - 2208414 - | hypothetical protein TERM 2942 2209419 - 2209409 - G 75 -4 -4.93898 | opp_overlap 2209409 ACATCACGATAAAAA GAAA GAG TTTC ATTTCACCACCTCAC stcC 2211926 - 2209437 - | putative outer membrane usher protein TERM 2943 2210518 - 2210532 + g 76 -5 -4.72127 | overlap 2210519 TCGTATACATCATTC TTATCG CGA CGATAG TTATTTTTATTATTG TERM 2944 2211304 - 2211319 + g 74 -4.6 -4.70169 | TTGCTTTTCCACTCA CCGCTG CTGC CATCGG TTTTATTAAATGTGG stcB 2212623 - 2211940 - | putative fimbrial chaperone protein TERM 2945 2212650 - 2212669 + r 73 -10.6 -3.10409 | opp_overlap 2212650 CTTGCTTATAAAAAA CCGGCGAC GAAC GCCGCCGG TTGAATAAATTAGTC TERM 2946 2212669 - 2212650 - R 100 -12.8 -5.24129 | opp_overlap 2212650 CTTGCTTATAAAAAA CCGGCGAC GAAC GCCGCCGG TTGAATAAATTAGTC stcA 2213209 - 2212679 - | putative fimbrial subunit protein TERM 2947 2213469 - 2213440 - R 100 -18.1 -5.82036 | ACAACAAATAAAAAA GCCCATATCATTG ATAT CAATGATATGGGC CTGCGGAATTAATAA yehE 2213769 - 2213488 - | hypothetical protein TERM 2948 2213976 - 2214021 + r 83 -10.7 -3.82946 | opp_overlap 2213979 2213981 2214015, overlap 2213979 2213981 2213983 GGGCTATTATTTTAT TAATACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTCATA TTCTCTTTGGAATAC TERM 2949 2213979 - 2214019 + r 79 -10.8 -3.49634 | gap 1, opp_overlap 2213979 2213981 2214015, overlap 2213976 2213981 2213983 CTATTATTTTATTAA T-ACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTCA TATTCTCTTTGGAAT TERM 2950 2214018 - 2213979 - R 90 -14.6 -3.17212 | opp_overlap 2213976 2213979 2213981 2213983, overlap 2213981 2214015 CTATTATTTTATTAA TACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTC ATATTCTCTTTGGAA TERM 2951 2214016 - 2213981 - R 100 -17.2 -3.1478 | opp_overlap 2213981 2213979 2213976 2213983, overlap 2213979 2214015 ATTATTTTATTAATA CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG TCATATTCTCTTTGG TERM 2952 2213981 - 2214016 + r 93 -15 -2.88134 | opp_overlap 2213979 2213981 2214015, overlap 2213979 2213976 2213983 ATTATTTTATTAATA CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG TCATATTCTCTTTGG TERM 2953 2213983 - 2214014 + r 78 -11.8 -2.97857 | opp_overlap 2213981 2213979, overlap 2213981 2213979 2213976 TATTTTATTAATACA TTCACTGCATCAAT ATAT ATTAATGCAGTGAA TGTCATATTCTCTTT mrp 2215156 - 2214047 - | putative ATPase TERM 2954 2215852 - 2215890 + G 81 -2.2 -5.28942 | opp_overlap 2215835 GAGCCGAAATCCGTG GTGTCCGGCGCGACGC CGGTAAT GCGTGACTCCGAGCAC TTTTTCTTTGACCTG TERM 2955 2217237 - 2217249 + G 70 -9.1 -3.63627 | CGCCAACCTCGCGCC GCGCA AAA TGCGC TTTGGCGTCTCCGAG metG 2215321 - 2217354 + | methionyl-tRNA synthetase TERM 2956 2217362 - 2217379 + F 100 -12.7 -5.03145 | opp_overlap 2217362 2217355 TGAAATAAGCAACAA GCCGGAG CATG CTCCGGC TTTTTTAACCGCTTA TERM 2957 2217379 - 2217362 - f 95 -12.7 -3.93237 | opp_overlap 2217362, overlap 2217355 TGAAATAAGCAACAA GCCGGAG CATG CTCCGGC TTTTTTAACCGCTTA yehR 2217595 - 2218053 + | putative lipoprotein TERM 2958 2218097 - 2218116 + F 100 -11.4 -5.01553 | overlap 2218091 GGTAAAGTCGCTCAG GGCGCTGC TTCG GCAGCGTC TTTTCTTTATGAATT TERM 2959 2218155 - 2218141 - f 76 -4.2 -5.055 | overlap 2218143 TGAATTCCGAAAAAA GACAGC CTC GCTGTA AGTCCCCTCGCCAAA TERM 2960 2218153 - 2218143 - f 71 -6.8 -4.15235 | overlap 2218141 AATTCCGAAAAAAGA CAGC CTC GCTG TAAGTCCCCTCGCCA STY2386 2218225 - 2218755 + | putative lipoprotein yehS 2219279 - 2218812 - | hypothetical protein yehT 2220045 - 2219326 - | putative two-component response-regulatory protein YehT yehU 2221727 - 2220042 - | putative two-component system sensor kinase TERM 2961 2221894 - 2221879 - H 79 -3.2 -5.31456 | TTAATGCATAAAAAA CAGGCA AAAC TTCCTG GTTCCTAAAAGAGCG TERM 2962 2222552 - 2222565 + G 78 -6.7 -4.56597 | overlap 2222558 GCATTCGCTTAGCCA GTTCC GCCC GGAAC TTTTTGACGGCAAGA yehV 2221950 - 2222681 + | putative transcriptional regulator STY2391 2222741 - 2222848 + | hypothetical protein yehW 2223560 - 2222829 - | putative permease transmembrane component yehX 2224491 - 2223544 - | ABC transporter ATP-binding protein TERM 2963 2223884 - 2223908 + g 95 -17.9 -2.80816 | opp_overlap 2223881 ATCAGCACCAGATGG TCGGCGAGGCG TAG CGCCTCGTCGA TGTCGTGCGTCACCA yehY 2225653 - 2224484 - | putative permease transmembrane component TERM 2964 2225430 - 2225401 - G 81 -3.6 -5.22006 | gap 2 GCATGACAATAAAAA GCGT-CTG-CGCCA TCAT CAGCGTCAGTACGC TACCGCGTTTACCGG yehZ 2226574 - 2225657 - | putative periplasmic protein TERM 2965 2226334 - 2226311 - G 76 -3 -5.03314 | opp_overlap 2226316 2226317, overlap 2226316 TTCATCTTTAAAAAA GAACGCCCCG TTAC CGGTGTATTC CGGATAGATATCCAG bglX 2229053 - 2226756 - | periplasmic beta-glucosidase precursor TERM 2966 2229442 - 2229464 + G 88 -11.2 -4.18164 | CAAGGGTTTCCGTTC CGGTCAGGGC GAC GCGCTGGCCG TTGTTTTCCCGGGTT TERM 2967 2230086 - 2230103 + G 71 -4.7 -4.66833 | overlap 2230087 TTGAATCTTCCGGCT GCGCCGG AAAA CTGGCGG TTTTTGCCGTTCGCC TERM 2968 2230560 - 2230572 + G 70 -6.9 -4.19678 | opp_overlap 2230559 2230560 ATGAATTTTTTAAAT CCGCT GAG GGCGG TTTCTTCACCTGTAC dld 2229320 - 2231050 + | D-lactate dehydrogenase TERM 2969 2231152 - 2231168 + T 85 -6.5 -5.2197 | overlap 2231136 2231147 GCGCTGGCGCTGGCT GCCGC CATTTGC GCGGC TTTTTGCTTTTTATA TERM 2970 2232175 - 2232198 + T 71 -6.8 -4.07687 | gap 1, overlap 2232192 2232193 CGCTACAGAAGAATC GTCAGCAAATG CTG CAT-TGCTGGC TTTTGCGCCAGCCCT yohC 2232809 - 2232222 - | hypothetical protein TERM 2971 2232403 - 2232392 - G 91 -7.2 -5.00884 | AGCCGGTGTAAAAAA GCGC GACA GCGC CGACCAAAGCGCATA TERM 2972 2232732 - 2232744 + g 73 -6.3 -4.44277 | GTGCGTATAGTGATG CGAAA CGG TTTCG TTTTCGCTTTTGATC TERM 2973 2232920 - 2232905 - H 71 -6.8 -4.07885 | gap 1, opp_overlap 2232896 TAGTCTCCGGCAAAA CGTCGGC TTT GCCG-CG CACGCCTCTTGCCAG yohD 2232941 - 2233537 + | hypothetical protein yohF 2234346 - 2233585 - | acetoin dehydrogenase yohG 2235848 - 2234412 - | multidrug resistance outer membrane protein MdtQ TERM 2974 2234898 - 2234886 - G 73 -6.2 -4.39426 | GATATCGGGATAAAA CGCG GCCTT CGCG GCGTCAATGCTGCTC TERM 2975 2235351 - 2235372 + g 87 -8.6 -4.58395 | overlap 2235341 TTTGACCGCCCCGAT CCGCGCGG TAACTT CAGCGCGG TTTTTCCCCCATAAA STY2403 2236039 - 2236236 + | hypothetical protein TERM 2976 2236252 - 2236288 + T 77 -10.8 -3.30771 | overlap 2236251 GATGATTTTCTGATT CCTGCGCCGGGCAG CGATAGTAT CTGCCCGGCACACG TTCTGGACGCTGTAG yohI 2237245 - 2236307 - | tRNA-dihydrouridine synthase C TERM 2977 2236991 - 2237006 + g 77 -8.2 -4.07568 | ATACGATCCCAACGC CGTCGC CCGC GCGGCG TTTTCCGCCAGCCAC TERM 2978 2237288 - 2237268 - R 100 -11.9 -5.58454 | opp_overlap 2237270 TCCACAGCAAAAAAA GAGGCGCTA TCA TAACGCCTC TCTGCGATGAGCAAA STY2405 2238547 - 2237354 - | salicylate hydroxylase STY2406 2239206 - 2238562 - | glutathione-S-transferase-family protein STY2407 2239916 - 2239215 - | FAA-hydrolase-family protein STY2408 2240969 - 2239932 - | putative gentisate 1,2-dioxygenase STY2409 2242339 - 2240981 - | putative n-hydroxybenzoate transporter STY2410 2242465 - 2243373 + | putative transcriptional regulator TERM 2979 2243561 - 2243580 + G 84 -5.7 -5.10461 | TTTTGTATTGATTTA TGCCTGT TTGTAC GCAGGCA TTTTTCTTGCATCAC yohJ 2243505 - 2243903 + | hypothetical protein TERM 2980 2243925 - 2243944 + G 75 -6.4 -4.56597 | ATATCTGGTGGTCGT TACCGCTG ACGC TGGCGGTA TTTTTCGCCGCCCGC TERM 2981 2243948 - 2243973 + G 86 -10.3 -4.14511 | ACGCTGGCGGTATTT TTCGCCGCCCG CAGA CTGGCGGCGCA TTTTAAAATGCCGTT yohK 2243900 - 2244595 + | hypothetical protein TERM 2982 2244629 - 2244639 + F 80 -5.4 -5.01042 | overlap 2244625 2244624 GGTTAAAATTTGCGA TACG TCG CGTA TTTTTCATTTAAGTT cdd 2244749 - 2245633 + | cytidine deaminase TERM 2983 2246401 - 2246411 + G 95 -8.2 -5.00884 | opp_overlap 2246401 CTCTATATTTTTAAA CGCG AAC CGCG TTTTTTAGGCCCGCT sanA 2245810 - 2246529 + | hypothetical protein STY2415 2246526 - 2246771 + | hypothetical protein TERM 2984 2247457 - 2247441 - g 76 -5 -4.75372 | overlap 2247443 ACCATTTACGAAAAA CAGCCG CAGCC CGGCGG ATGGCTGCGTCACGG TERM 2985 2247468 - 2247443 - g 71 -7.5 -3.99327 | overlap 2247441 CATTTACGAAAAACA GCCGCAGCC CGGCGGAT GGCTGCGTC ACGGCATCCCGGCAT STY2416 2246976 - 2248217 + | putative oxidoreductase insB 2249970 - 2249467 - | insertion element IS1 protein InsB insA 2250164 - 2249889 - | insertion element IS1 protein InsA TERM 2986 2250264 - 2250236 - R 74 -10.2 -3.16683 | gap 1, opp_overlap 2250237 AGCTCACGGTATGAA GCCCGGCGC-GCA GTTT CGCTGCGCCGGGT TATCTGATAAGCAAG TERM 2987 2250237 - 2250263 + r 90 -13 -3.54475 | gap 1, opp_overlap 2250236 GCTCACGGTATGAAG CCCGGCGC-GC AGTTTC GCTGCGCCGGG TTATCTGATAAGCAA mglC 2251307 - 2250297 - | beta-methylgalactoside transporter inner membrane component TERM 2988 2251345 - 2251363 + r 79 -8.2 -4.25052 | opp_overlap 2251339 2251345 2251343, overlap 2251339 2251340 TGCAAAGAAGCAAGA CGCAAAAT TTC GTTTTGCG TTGTTGTTTTAGTAT mglB 2253973 - 2252975 - | D-galactose-binding periplasmic protein precursor TERM 2989 2253076 - 2253092 + g 91 -10.1 -4.57569 | TGCCGTCAGCCGCGC CCTTGCC TTC GGCGAGG TTTTTCGCCAGATCG TERM 2990 2254443 - 2254426 - R 72 -6.3 -4.21989 | overlap 2254416 CACAATGTTAATAAA CTGTGAA TTTA CTCACAG ATTGAAAACGGTTAC galS 2255494 - 2254472 - | DNA-binding transcriptional regulator GalS TERM 2991 2255308 - 2255279 - G 71 -4.9 -4.59109 | CAGAGCGCCGAAAAA GGCATCGGAAACA TCCA TGACTACGACGCC GATGGTATCGCTCAC yeiB 2256786 - 2255644 - | hypothetical protein TERM 2992 2256016 - 2255998 - G 90 -12.4 -3.9461 | CGCCTGCAATAAGAA GGCGCACC AGC GGTACGCC CAGTCCAGCCGCCAT folE 2257469 - 2256801 - | GTP cyclohydrolase I yeiG 2257799 - 2258656 + | putative esterase STY2429 2259034 - 2258645 - | putative DNA-binding protein sdaC 2260406 - 2259039 - | putative L-serine dehydratase STY2431 2260623 - 2261510 + | putative hydrolase TERM 2993 2262906 - 2262866 - T 77 -10.3 -3.30124 | opp_overlap 2262870, overlap 2262868 2262869 CTGCATCGGTTATAA CATTCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGTCTC TGTCAGAAACGGTAA TERM 2994 2262904 - 2262868 - T 83 -12.9 -3.21924 | opp_overlap 2262870, overlap 2262866 2262869 GCATCGGTTATAACA TTCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGTC TCTGTCAGAAACGGT TERM 2995 2262903 - 2262869 - T 95 -16.4 -2.5294 | opp_overlap 2262870, overlap 2262868 2262866 CATCGGTTATAACAT TCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGT CTCTGTCAGAAACGG TERM 2996 2262870 - 2262902 + T 100 -19.2 -2.98823 | opp_overlap 2262869 2262868 2262866 ATCGGTTATAACATT CTGGCGACAGCGGC AAAAC GCGGCTGTCGCCAG TCTCTGTCAGAAACG cirA 2264900 - 2262909 - | colicin I receptor TERM 2997 2265168 - 2265151 - R 100 -11.3 -6.07374 | AGAAAAAACAAAAAA CCCTCTC GAAT GAGAGGG TTAGAAGGGTCAGGT lysP 2266715 - 2265246 - | lysine transporter TERM 2998 2265681 - 2265671 - G 71 -8.2 -3.85698 | overlap 2265672 CGGTGGTGGCATAAA GCGC ATT GCGC GGTACGCCGCCGCGG TERM 2999 2266573 - 2266560 - G 74 -3.1 -4.92791 | gap 1, overlap 2266562 CAGAATATAAGAAAA CA-GCG CGC CGCCTG GCCCCGCCAGAGAAA yeiE 2267768 - 2266905 - | putative DNA-binding transcriptional regulator TERM 3000 2268855 - 2268840 - g 76 -3.2 -5.09225 | AGCGCATTGAAAAAA GCGG GGGCGAAA CCGC TGCTGATGGCGCTGG yeiH 2267889 - 2268938 + | hypothetical protein TERM 3001 2269090 - 2269107 + G 70 -7 -4.07568 | overlap 2269089 GCGCGGCTGAAATTG GCGCAA CGGCCT TTGCGC TTTTCACAAAAAACC TERM 3002 2269312 - 2269275 - g 83 -7.8 -4.58283 | gap 1, overlap 2269301 GAAGCGCTGGAAAAA TCAC-GCGATGCCTTTC TCGAT GAAATGCAGCGCTGTGA ACAACTCGGCTTAAC nfo 2269017 - 2269874 + | endonuclease IV TERM 3003 2269893 - 2269930 + T 95 -12.9 -3.73486 | opp_overlap 2269903, overlap 2269903 TCAATGTTCTTCAGG CAATAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTAGCG TGTTTCTCTTATGCC TERM 3004 2269920 - 2269903 - T 100 -11.3 -5.4833 | opp_overlap 2269893 2269903 TCAGGCAATAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTAGCGTGTTT TERM 3005 2269903 - 2269920 + T 100 -11.3 -5.10077 | opp_overlap 2269903, overlap 2269893 TCAGGCAATAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTAGCGTGTTT fruA 2271627 - 2269939 - | fructose-specific PTS system IIBC component fruK 2272582 - 2271644 - | 1-phosphofructokinase fruB 2273712 - 2272582 - | bifunctional fructose-specific PTS IIA/HPr protein TERM 3006 2273799 - 2273764 - H 86 -2.7 -5.67967 | gap 2 ACTATGAGAAAAAAA GCGCCAATCTGAGTTAT CAAA AAAAC-CAGATC-GCGC TGAAACGTTTCAAGA TERM 3007 2273913 - 2273935 + H 93 -6.2 -5.64421 | opp_overlap 2273913 AACAGACCCTCAATA GCTGACGCAT AAA AGGCTTCAGC TTTTTTCTTTCAGCT yeiO 2274082 - 2275263 + | sugar efflux transporter STY2444 2275993 - 2275328 - | hypothetical protein TERM 3008 2275536 - 2275556 + g 72 -2.6 -4.83615 | AAGGATAGCTTTGTA TATGTTTC CGTTT GTAACATA TTTTTATGCACGCTA STY2445 2276117 - 2275995 - | hypothetical protein TERM 3009 2276862 - 2276844 - g 85 -4.6 -5.27335 | overlap 2276825 TTGTCCAAAGAAAAA TCCAGATT TAA AATGTGGA CGTCATCATGATCAG STY2446 2276572 - 2276976 + | hypothetical protein TERM 3010 2277316 - 2277273 - f 72 -8.2 -3.70919 | gap 1, opp_overlap 2277312, overlap 2277282 CTGAAAGTGGAAGAA CGTTTCAAAGGCGACGATATC GTT GATACCGTCACCC-TGAGCCG TCGCGGCGTTGACTT TERM 3011 2277308 - 2277282 - f 93 -13.8 -3.59247 | overlap 2277273 GAAGAACGTTTCAAA GGCGACGATATC GTT GATACCGTCACC CTGAGCCGTCGCGGC TERM 3012 2277711 - 2277725 + F 82 -5.6 -5.10665 | overlap 2277695 2277710 TCGGCTGCGCCCCAG GGCGCA GTC TGCCCC TTTTATTTATTGACT TERM 3013 2278408 - 2278356 - g 71 -4.6 -4.64676 | gap 1, overlap 2278360 TCATCGCCAATAAAA CCGACCGCGCCAC-GGCGCAGAGCG ATGC CGCCCTGCAACAGTGGTGGCGACAG TACGGCGGCGATCGT yeiR 2277896 - 2278882 + | hypothetical protein STY2449 2278912 - 2279631 + | hypothetical protein TERM 3014 2279647 - 2279682 + F 89 -11.4 -4.01853 | gap 1, opp_overlap 2279647 2279645 CCCATACAATTAACA TTGCCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAA TTTATGATGATATTC TERM 3015 2280593 - 2280579 - g 82 -5.6 -5.0538 | CCGTACTGGAAAAAA CGCTAC AAT GAAGCG CGTCGAGTTCTGAGC STY2450 2280045 - 2280617 + | putative outer membrane lipoprotein TERM 3016 2280664 - 2280691 + F 74 -11.4 -2.90804 | opp_overlap 2280669, overlap 2280669 CTGATGAGACGACAT AAAAAGCACTGC TTCA GCAGTGCTTTTG CTTATTATCCCTTCT TERM 3017 2280686 - 2280669 - f 100 -11.3 -5.02502 | opp_overlap 2280669 2280664 GAGACGACATAAAAA GCACTGC TTCA GCAGTGC TTTTGCTTATTATCC TERM 3018 2280669 - 2280686 + F 95 -11.3 -4.59414 | opp_overlap 2280669, overlap 2280664 GAGACGACATAAAAA GCACTGC TTCA GCAGTGC TTTTGCTTATTATCC TERM 3019 2280858 - 2280832 - f 74 -10.2 -3.22653 | overlap 2280830 2280833 ACTACTGCGACAATA CGCTTTCCTGCG CAT CACAGAAAAGCA TGACTATCCGGGGTA TERM 3020 2280857 - 2280833 - f 73 -11.5 -2.53271 | overlap 2280832 2280830 CTACTGCGACAATAC GCTTTCCTGCG CAT CACAGAAAAGC ATGACTATCCGGGGT rtn 2280943 - 2282499 + | hypothetical protein TERM 3021 2282689 - 2282675 - g 77 -8.6 -4.10552 | GCCCAGGAAATCAAA GAAAGC TAC GCTTTC GCCGTACTCGGCGAA yejA 2282606 - 2284411 + | putative transport system periplasmic binding protein TERM 3022 2285108 - 2285136 + G 86 -10.9 -4.08767 | opp_overlap 2285106 TTGTGGCATATTACG CTGCCGGTGTTGG CGA CCGTCATCGGCGG TTTTGCCGCCCTGAC yejB 2284421 - 2285515 + | putative binding-protein-dependent transporter TERM 3023 2286496 - 2286516 + G 71 -8.1 -3.80573 | CTGCTGATTTTTATC GGCGAAGCG GTA CGCGACGCC TTTGATCCTGCTAAG yejE 2285515 - 2286540 + | putative binding-protein-dependent transporter TERM 3024 2286898 - 2286881 - g 73 -5.5 -4.59109 | opp_overlap 2286871 CATACGCTGGAAAAA CAGCTCT ATGA AGTGCTG TCGCTCCATCGGGGA TERM 3025 2287535 - 2287518 - g 71 -4.8 -4.60487 | opp_overlap 2287518 2287534 CAGGATCGGGAAAAA GCACCA CCGGTC TGGCGC TGTTACGGCTTATCC yejF 2286542 - 2288131 + | putative ABC-transporter ATP-binding protein yejG 2288479 - 2288135 - | hypothetical protein STY2457 2288873 - 2288775 - | hypothetical protein bcr 2290060 - 2288870 - | bicyclomycin/multidrug efflux system TERM 3026 2289478 - 2289500 + g 75 -11.2 -3.44848 | opp_overlap 2289475 2289476, overlap 2289476 GAATATGAAAAGGCT GACGCCGCTC AAC GGGCAGCGTC TCTTTAATCAAAGCA yejD 2290783 - 2290088 - | 16S rRNA pseudouridylate synthase A TERM 3027 2290831 - 2290815 - H 72 -8.7 -3.81258 | GTAATAATACGGAAA TCGGGCA TTC TACCCGA AAAAAGGGAATTGCT yejH 2290935 - 2292695 + | putative helicase rplY 2292820 - 2293104 + | 50S ribosomal protein L25 TERM 3028 2293119 - 2293150 + T 78 -12.4 -2.71246 | opp_overlap 2293127, overlap 2293127 ATCGCCTGGAAGTTG AAGAAAAACCCCGC CCCG GCGGGGTTTTTTTA TGCGTTTAATTGAAT TERM 3029 2293127 - 2293142 + T 100 -11.8 -5.68039 | opp_overlap 2293127, overlap 2293119 GAAGTTGAAGAAAAA CCCCGC CCCG GCGGGG TTTTTTTATGCGTTT TERM 3030 2293142 - 2293127 - T 100 -11.8 -5.10208 | opp_overlap 2293127 2293119 GAAGTTGAAGAAAAA CCCCGC CCCG GCGGGG TTTTTTTATGCGTTT STY2462 2293833 - 2293213 - | hypothetical protein TERM 3031 2293771 - 2293756 - G 72 -4 -4.8083 | gap 1 CAACATCATCAAAAA TGCG-AC AAT GTGCGCA TACAAAACCTGCCGA yejK 2294868 - 2293861 - | nucleoid-associated protein NdpA yejL 2295048 - 2295275 + | hypothetical protein TERM 3032 2295804 - 2295783 - g 70 -6.5 -4.09864 | gap 1 ATGGAGTTGGCAAAA GCTGCGCAGT CTC AC-GCGCCGC CGCCATTTCGCAAGG TERM 3033 2295810 - 2295831 + G 70 -5.1 -4.50988 | overlap 2295812 2295815 2295819 CACGCGCCGCCGCCA TTTCGCAAG GCCG CTTGCGGCA TTCTTTTTCGTCTCC TERM 3034 2295815 - 2295834 + G 72 -2 -4.85177 | overlap 2295812 2295810 2295819 GCCGCCGCCATTTCG CAAGGCCG CTTG CGGCATTC TTTTTCGTCTCCTTT yejM 2295307 - 2297067 + | putative sulphatase TERM 3035 2297234 - 2297251 + T 100 -9.1 -5.4251 | opp_overlap 2297234 2297233 AATTCCCCTTAAAAG CCAGCCT GCCA GGGCTGG TTTTTTATATATCCA sspH2 2300203 - 2297837 - | secreted effector protein TERM 3036 2299783 - 2299817 + g 71 -10.6 -3.28866 | overlap 2299782 2299780 2299784 CCGCGTGTCCTGTGC CCTCCTCACCCTGTGC TGT GTCCAGGGTGAGGCGA TGTGTTTCACTGTAC TERM 3037 2299784 - 2299816 + g 81 -14.1 -2.56838 | overlap 2299783 2299782 2299780 CGCGTGTCCTGTGCC CTCCTCACCCTGTGC TGT GTCCAGGGTGAGGCG ATGTGTTTCACTGTA STY2468 2300827 - 2300372 - | bacteriophage tail fiber assembly protein TERM 3038 2301429 - 2301445 + H 72 -5.8 -4.38927 | opp_overlap 2301426, overlap 2301430 2301435 GCGCGGCAATCAGTT TGCGGA CAAAC TCCGCG TTTGTTGTCTGAAGC TERM 3039 2301805 - 2301817 + H 71 -10.5 -2.64354 | overlap 2301807 2301815 CGATGCTGATGACGA GGCGG CTG CCGCC GTTCTGGCTGTGTCA TERM 3040 2301839 - 2301864 + H 72 -5.9 -4.4648 | GCTGTGTCAGCCGAC GCCGCGCTGGC TGAT GCCTCCCCGGC TTTTGTGGTCGCCGT TERM 3041 2301958 - 2301941 - H 76 -8.4 -4.08064 | opp_overlap 2301941 AATTCCCCTTGAAAA CCAGCC TGTCAG GGCTGG TTTTTTTATGCCTAC TERM 3042 2301941 - 2301958 + H 100 -9.1 -5.64274 | opp_overlap 2301941 AATTCCCCTTGAAAA CCAGCCT GTCA GGGCTGG TTTTTTTATGCCTAC STY2470 2301966 - 2302169 + | homolog of virulence protein msgA STY2471 2302621 - 2302361 - | hypothetical protein TERM 3043 2303523 - 2303533 + H 74 -6.8 -4.3534 | opp_overlap 2303516 TCAGCTAATGACTCG CCTG TCA CAGG TTTTACTACTTACCC narP 2303653 - 2304300 + | transcriptional regulator NarP TERM 3044 2304298 - 2304343 + T 83 -9.5 -4.11183 | gap 1, opp_overlap 2304304 2304308, overlap 2304300 2304301 ACACGCGGAATGCAG TAACAAGCCAGGCCCGGTGGCG CCA CGCCACCGGGCC-GTCAGGGTC TTATTTCTCCTGCGC TERM 3045 2304300 - 2304341 + T 86 -12.1 -3.64882 | gap 1, opp_overlap 2304304 2304308, overlap 2304298 2304301 ACGCGGAATGCAGTA ACAAGCCAGGCCCGGTGGCG CCA CGCCACCGGGCC-GTCAGGG TCTTATTTCTCCTGC TERM 3046 2304301 - 2304340 + T 93 -15.6 -2.78206 | gap 1, opp_overlap 2304304 2304308, overlap 2304300 2304298 CGCGGAATGCAGTAA CAAGCCAGGCCCGGTGGCG CCA CGCCACCGGGCC-GTCAGG GTCTTATTTCTCCTG TERM 3047 2304337 - 2304304 - T 100 -20.3 -3.75105 | gap 1, opp_overlap 2304301 2304300 2304298, overlap 2304308 GGAATGCAGTAACAA GCCAGGCCCGGTGGCG CCA CGCCACCGGGCC-GTC AGGGTCTTATTTCTC TERM 3048 2304334 - 2304308 - T 100 -25.2 -2.67428 | opp_overlap 2304301 2304300 2304298, overlap 2304304 TGCAGTAACAAGCCA GGCCCGGTGGCG CCA CGCCACCGGGCC GTCAGGGTCTTATTT ccmH1 2305387 - 2304344 - | cytochrome c-type biogenesis protein H1 TERM 3049 2304601 - 2304611 + g 77 -8.2 -4.11216 | CCGCGTAGCCCAGCG CCGC ATC GCGG TTTTCCGGGTCCAGA TERM 3050 2305004 - 2304958 - G 100 -15.6 -3.53012 | overlap 2304932 CGCGCGCGCCGCAAA CCGGGGTGTCCGCCGGCAGCGG CTC CCGGCGCAGGCGCACCCGCCGG CGCGTCCGGGCGACG dsbE1 2305941 - 2305384 - | thiol:disulfide interchange protein ccmF1 2307869 - 2305938 - | cytochrome c-type biogenesis protein F1 ccmE1 2308345 - 2307866 - | cytochrome c-type biogenesis protein CcmE ccmD1 2308554 - 2308342 - | heme exporter protein D1 TERM 3051 2308512 - 2308501 - G 100 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TACC CGCC CATGGCGAAAAAATC TERM 3052 2308536 - 2308526 - G 76 -3.2 -5.03314 | CCCATGGCGAAAAAA TCGC TCC ACGA TGAAAATGCCGGACT ccmC1 2309288 - 2308551 - | heme exporter protein C1 TERM 3053 2308704 - 2308665 - G 83 -12.8 -3.25304 | gap 1, overlap 2308655 2308666 AAAGAGCAGCAGGAA GCCGGCGATG-GCCCAGCG CAG CGGCGAGCGCATCGCCGGG TCGATACTCAGCTGC TERM 3054 2308703 - 2308666 - G 89 -16.3 -2.54459 | gap 1, overlap 2308665 2308655 AAGAGCAGCAGGAAG CCGGCGATG-GCCCAGCG CAG CGGCGAGCGCATCGCCGG GTCGATACTCAGCTG TERM 3055 2309189 - 2309169 - G 83 -10.3 -4.05788 | CGGGGCGAAACCAAA GCCCCGGAC CCA GCCCGTGGC CAGCACAATGATGCC ccmB1 2309999 - 2309340 - | heme exporter protein B1 ccmA1 2310613 - 2309996 - | cytochrome c biogenesis protein CcmA TERM 3056 2310343 - 2310326 - G 71 -4.7 -4.56775 | opp_overlap 2310339 2310341, overlap 2310328 ACCGGGGTGGAAAAA GTGCAGG TTCT CCCGCGC CGTCAGGCGGGTTTT TERM 3057 2310339 - 2310354 + g 78 -6 -4.83169 | opp_overlap 2310328 2310326, overlap 2310341 AAGTGCAGGTTCTCC CGCGCC GTCA GGCGGG TTTTTATCCCCGGCT TERM 3058 2310450 - 2310492 + g 75 -6 -4.56775 | opp_overlap 2310442 CAGTACACCTCCCCG CCGTCCGGGCGCGCCAGC CCGGTCA GCAGGCGCAGCAGGGTGG TTTTTCCGGCGCCGT napC 2311236 - 2310634 - | cytochrome c-type protein NapC napB 2311695 - 2311246 - | diheme cytochrome c550 TERM 3059 2311351 - 2311337 - G 70 -7 -4.09117 | TGCAGGCAGAAATAA CGACGC GGC GCGACG TTGCCCGACACTTTA napH 2312680 - 2311811 - | quinol dehydrogenase membrane component TERM 3060 2312556 - 2312543 - G 73 -5.9 -4.43272 | ATGCAAAACCCAAAA GCCCA GCCA CGGGC CGCTGAGAAACATCC napG 2313362 - 2312667 - | quinol dehydrogenase periplasmic component TERM 3061 2313228 - 2313250 + g 83 -10.4 -3.92324 | GCCAGGCGGACGCAG CCGCACGCCC GTT GCGCGCGCGG TTTGCTGTTGCAAGC napA 2315855 - 2313369 - | nitrate reductase TERM 3062 2314235 - 2314259 + g 71 -7.2 -4.06419 | gap 2, overlap 2314233 GCCAGAACTGCGTGC GGCG-TT-CGGC GTT GCCGTAAGCGCC TTCTTTCTCAACCCA yojF 2316115 - 2315852 - | assembly protein for periplasmic nitrate reductase napF 2316596 - 2316105 - | ferredoxin-type protein TERM 3063 2316282 - 2316297 + g 80 -9 -4.20531 | opp_overlap 2316253 2316282 ATGGCATTCAACCGA CTGCCT GGCG AGGCAG TTTTCCGTGAGTGTA TERM 3064 2317127 - 2317104 - g 76 -3 -5.00884 | overlap 2317105 AGCCGCTGGAAAAAA TCGCCCCCTA TCCG CAGGCGGAGA AAGGAATGAAGCGGC eco 2317010 - 2317504 + | ecotin precursor TERM 3065 2317678 - 2317691 + T 74 -8.1 -3.85817 | CGTGCGGACGTAGGG CTGCC ATCA GGCAG TTTATCCGGCGCCAT yojI 2319356 - 2317713 - | multidrug transporter membrane component/ATP-binding component TERM 3066 2317979 - 2317989 + g 100 -8.2 -5.49809 | opp_overlap 2317951 CCAGCGCCAGCAGCA GCGC AAT GCGC TTTTTTTGCCCTTTC TERM 3067 2318313 - 2318301 - G 74 -3.3 -4.8622 | overlap 2318303 GCCGCCAATTAAAAA CAGCA GTT CGCCG CGGTGAATCGTCAGG TERM 3068 2318384 - 2318372 - G 70 -3.3 -4.70659 | opp_overlap 2318380 CCTGATAGTGAAAAA CCACG TTG CGCAG CTCCAGCGTCTTCCA TERM 3069 2319215 - 2319229 + g 79 -11.4 -3.64822 | overlap 2319200 CCGGCAGCACCATGA CGGTGG TGT CCACCG TTTCAATCAGGCGCT alkB 2320082 - 2319432 - | AlkB protein TERM 3070 2319596 - 2319579 - G 72 -11.3 -3.14931 | GCCATGCTCCAGTAA GATCCGC TGGA GCGGATC GCTGCGACGCAGGCC ada 2321146 - 2320085 - | ADA regulatory protein TERM 3071 2321012 - 2320988 - G 74 -2.1 -5.00616 | overlap 2321006 CGCGTTGGCAAAAAA GCGAACATT TTTACGT AACGCCCGC TTCGAGCGACAAGAA yojL 2322279 - 2321227 - | thiamine biosynthesis lipoprotein ApbE TERM 3072 2321812 - 2321796 - G 71 -10.9 -3.28924 | opp_overlap 2321795 2321794 CAGCCCTGTCGATAA CCTGCAA ATG TTGCAGG CCTGTTTTCGCTTTT TERM 3073 2322258 - 2322239 - G 84 -2.8 -5.32944 | gap 1 CCCATAAGTAAAAAA GCCGC-TGC CAG ACACACGGC CCGGCAAAAAGTCAT TERM 3074 2322372 - 2322359 - R 100 -9.5 -5.18357 | opp_overlap 2322359 TAAGGCATGAAAAAA GGGCC CGCA GGCCC TTTAGCAACATCTTT TERM 3075 2322359 - 2322372 + r 75 -9.5 -3.55815 | opp_overlap 2322359 TAAGGCATGAAAAAA GGGCC CGCA GGCCC TTTAGCAACATCTTT ompC 2323530 - 2322394 - | outer membrane porin protein C TERM 3076 2323930 - 2323948 + H 100 -11 -5.51165 | TTACCCCTATTTCAA CCGGATGC TTC GCATTCGG TTTTTTTACCCTTTT TERM 3077 2324304 - 2324319 + G 71 -4.6 -4.58786 | GATTCTCCCTTCTAC CGGGAA GCAT TACCCG TTTCTTCTTATTGCT yojN 2324258 - 2326927 + | phosphotransfer intermediate protein in two-component regulatory system with RcsBC TERM 3078 2327403 - 2327365 - g 77 -7.5 -4.36914 | gap 1, overlap 2327368 GTCTGCTGGAGAAAA TCAGCG-CAGGCGGTTAC GGCG ATAAGCGCCTGTCGCCAA AAGAGAGCGAAGTAT rcsB 2326944 - 2327594 + | transcriptional regulator RcsB TERM 3079 2327664 - 2327692 + T 85 -6.6 -5.24129 | gap 1, overlap 2327665 GACTCATCTTTTACA GGCCGGACAGGCG ACGC CGCCA-TCCGGCA TTTTTTATGCCCGCG TERM 3080 2327665 - 2327691 + T 79 -10.1 -3.73995 | gap 1, overlap 2327664 ACTCATCTTTTACAG GCCGGACAGGCG ACGC CGCCA-TCCGGC ATTTTTTATGCCCGC rcsC 2330543 - 2327697 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 3081 2330650 - 2330626 - R 93 -9.9 -4.68655 | opp_overlap 2330629, overlap 2330628 2330629 CAACGGCAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 3082 2330648 - 2330628 - R 95 -12.5 -3.94471 | opp_overlap 2330629, overlap 2330626 2330629 ACGGCAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 3083 2330629 - 2330647 + r 100 -16 -4.91109 | opp_overlap 2330629 2330628 2330626 CGGCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 3084 2330647 - 2330629 - R 93 -16 -2.95598 | opp_overlap 2330629, overlap 2330628 2330626 CGGCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 2331187 - 2330729 - | transposase for insertion sequence element IS200 TERM 3085 2331300 - 2331318 + r 100 -16 -4.18018 | opp_overlap 2331290 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAG TERM 3086 2331356 - 2331339 - R 100 -14.1 -5.27206 | CATAGACAAGAAAAA GGGCCGG ATAT CCGGCCC TCGCACAGCAATAAT gyrA 2334009 - 2331373 - | DNA gyrase subunit A TERM 3087 2332951 - 2332913 - G 71 -7.4 -3.92746 | gap 1 CGCAGTTCAAAAATA GTCCGACGCGTCACCAC TTCACG GCGGTGGCGCA-CGAAC GCTGAAATAATATCT STY2500 2335621 - 2334419 - | putative MR-MLE-family protein TERM 3088 2337811 - 2337801 - H 72 -3.2 -5.08169 | opp_overlap 2337804 2337807, overlap 2337791 2337807 AGATATGTTAAAAAA CAAC AAC GTCG AGGGCGTCTGTAATT TERM 3089 2337884 - 2337862 - H 79 -10.6 -3.48395 | overlap 2337863 2337874 2337875 AGCGGTTTTACAGAA CGCGCAAGAA AAC TTCTTGCGCT GAAAGCGTAATAAAG TERM 3090 2337883 - 2337863 - H 83 -14.1 -2.68823 | overlap 2337862 2337874 2337875 GCGGTTTTACAGAAC GCGCAAGAA AAC TTCTTGCGC TGAAAGCGTAATAAA ubiG 2337977 - 2338705 + | 3-demethylubiquinone-9 3-methyltransferase TERM 3091 2338728 - 2338754 + F 83 -9.4 -4.21607 | opp_overlap 2338728, overlap 2338719 GAATTTTCCTATAAG GGTTGCGTTAGA TCA TCGGGCGCAACC TTTCTCTTCGATGAA TERM 3092 2338785 - 2338795 + F 89 -4 -5.66684 | AAAATCAGCATTCGA TCAA ATT TTGA TTTTTTTATGAATTG TERM 3093 2340795 - 2340785 - g 70 -6.8 -4.20084 | ACCACCTATGCAAAA GGCA TTT TGCC GATCGACACCTACAA nrdA 2339060 - 2341345 + | ribonucleotide-diphosphate reductase subunit alpha nrdB 2341458 - 2342588 + | ribonucleotide-diphosphate reductase subunit beta TERM 3094 2342818 - 2342793 - g 93 -16.3 -2.87931 | TCCAGCCGGGAGAGA TTTTGCCCTGC TGCT GCAGGGCAAAA GGCGATATCGAAATC yfaE 2342588 - 2342842 + | 2Fe-2S ferredoxin YfaE STY2509 2344034 - 2342844 - | putative transmembrane transport protein STY2510 2344196 - 2345074 + | putative transcriptional regulator TERM 3095 2345133 - 2345166 + T 74 -10.4 -3.25786 | gap 2, overlap 2345127 GCAAACGTTGCGCCA G-GCCGGATGAGG-CG TTTA TGTCCTCATCCGGCGC TTCACTTCTACTATG glpQ 2346260 - 2345190 - | glycerophosphodiester phosphodiesterase TERM 3096 2346041 - 2346060 + g 100 -13.6 -3.97947 | opp_overlap 2346030 GGTAGTGGTCATGGA GGACGACC AGAT GGTCGTCC TTTGTCATCACTAAA glpT 2347623 - 2346265 - | sn-glycerol-3-phosphate transporter TERM 3097 2346470 - 2346486 + g 77 -3.5 -5.00616 | opp_overlap 2346456 2346466, overlap 2346472 AGACCGGTAAAGCCC GCCGCCG TAC CCGCCGC TTTTTTCGGCGCCAG TERM 3098 2347359 - 2347344 - G 78 -6 -4.82901 | opp_overlap 2347357 CTGCCGGCAGAAAAA CGCGCG GATT CGAGCG ATCGGACACCGAACC TERM 3099 2347877 - 2347863 - g 86 -7.8 -4.70739 | overlap 2347854 GAAAAACAATGAAAA CTCGCG ACT CGCAAG CAAGTGACGTGATTA TERM 3100 2347933 - 2347947 + G 70 -9.2 -3.7456 | opp_overlap 2347911 AGGGATCGCCCGCGA CTGCGC GCT GCGCGG TTTACGTGTCATTCT TERM 3101 2348295 - 2348282 - g 77 -8.1 -4.07687 | ATCGGTGCGGTAAAA GTGCC GGAT GGCAC CGTAGACCCTTTCCG glpA 2347856 - 2349484 + | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 3102 2350032 - 2350051 + G 71 -11.4 -2.93723 | AACCCGACGGAATTT CGCGCGGT CAAT ATCGCGCG TCTGCTTGATAACGA glpB 2349474 - 2350733 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 2350730 - 2351920 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 3103 2351926 - 2351950 + F 77 -11.3 -3.29471 | opp_overlap 2351928, overlap 2351927 GCTGGGCTAAGTAAA AAGCGCCGGAG CCC CTCCGGCGCCA TTACTCTACTCACCA TERM 3104 2351927 - 2351949 + F 86 -14.8 -2.57468 | opp_overlap 2351928, overlap 2351926 CTGGGCTAAGTAAAA AGCGCCGGAG CCC CTCCGGCGCC ATTACTCTACTCACC TERM 3105 2351948 - 2351928 - f 100 -18.3 -4.8622 | opp_overlap 2351927 2351926 TGGGCTAAGTAAAAA GCGCCGGAG CCC CTCCGGCGC CATTACTCTACTCAC TERM 3106 2352253 - 2352238 - g 80 -4.7 -5.00467 | opp_overlap 2352238 2352233, overlap 2352233 TGAATAATAATAAAA TCAGG TCTATG CCTGA TTTAATATATCTCCC STY2516 2352222 - 2352425 + | hypothetical protein STY2517 2352415 - 2353368 + | deubiquitinase TERM 3107 2353445 - 2353425 - T 93 -15.5 -2.9248 | overlap 2353422 ATAAGTATATAAGGA TGGGAAGGC CAA GCCTTCCCA CTAAAAGTTCTATGC TERM 3108 2353619 - 2353630 + T 78 -5.8 -4.88067 | opp_overlap 2353604 CGCGTAAGGCATACG TGCC ATCC GGCA TTTTTCTCAATAACT STY2519 2354440 - 2353637 - | putative aldolase TERM 3109 2353822 - 2353800 - G 91 -7.6 -5.03314 | overlap 2353801 2353802 TCGACCGCCAAAAAA CCCGCCGC TTTTCCG GCGGCGCG AATACGATAAATACA TERM 3110 2353818 - 2353801 - G 71 -9.8 -3.61506 | overlap 2353800 2353802 CGACCGCCAAAAAAC CCGCCG CTTTTC CGGCGG CGCGAATACGATAAA STY2520 2355755 - 2354466 - | putative transport protein STY2521 2357028 - 2355811 - | putative MR-MLE-family protein STY2522 2357812 - 2357030 - | putative transcriptional regulator STY2523 2359258 - 2358062 - | competence damage-inducible protein A TERM 3111 2359365 - 2359346 - R 78 -12.8 -2.54344 | overlap 2359345 2359343 GAAAAGGAGGAATAT GGCGCGAC GATT GCCGCGCC GTTAGCATCAAAAAC TERM 3112 2359395 - 2359380 - R 82 -6.8 -4.77036 | overlap 2359381 CGTTAGCATCAAAAA CTGGCG TTTA CGCCAA CATAAGGGCCGTCAG STY2524 2360020 - 2359373 - | hypothetical protein TERM 3113 2360114 - 2360104 - H 91 -6.8 -5.61689 | opp_overlap 2360104 AAAATTAACAAAAAA CGCA GTC TGCG TTATCGCTTCCATTT STY2525 2360194 - 2360619 + | hypothetical protein TERM 3114 2360624 - 2360643 + T 76 -9.3 -3.76413 | opp_overlap 2360623 2360620 2360624 GGTTATTATAATAAC GACAGCC GCTTCA GGCTGTC TTTACGCTTTTAACA ais 2361269 - 2360664 - | Ais protein TERM 3115 2361339 - 2361327 - H 76 -7.7 -4.24384 | overlap 2361322 ACGATTAAAATGAAA TTCCG CGA CGGAA GACCAGAAACATAAA TERM 3116 2362072 - 2362054 - g 83 -10.2 -3.95153 | opp_overlap 2362064 2362070, overlap 2362046 GGAACCAGCTACAAA GGTCGCCA CAT TGGCGCCC GGGGCACCGCGATTT STY2527 2361562 - 2362701 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase pmrF 2362704 - 2363687 + | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase STY2529 2363684 - 2365666 + | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase STY2530 2365663 - 2366562 + | hypothetical protein TERM 3117 2366755 - 2366745 - g 71 -4.6 -4.59773 | CGTTATTTTGAAAAA CCGA TAG CCGG TTACTGGATAAACAG arnT 2366559 - 2368205 + | 4-amino-4-deoxy-L-arabinose transferase STY2532 2368202 - 2368537 + | hypothetical protein STY2533 2368537 - 2368914 + | hypothetical protein pmrD 2369166 - 2368909 - | polymyxin B resistance protein menE 2370631 - 2369264 - | O-succinylbenzoic acid--CoA ligase menC 2371590 - 2370628 - | O-succinylbenzoate synthase TERM 3118 2371009 - 2370988 - G 77 -11.5 -3.57144 | opp_overlap 2370980 2370990 GGTTTCACGGGCAAA GGCGCGGGA ATCA TCCCGCGTC TTACACGGTTCTTCG TERM 3119 2370990 - 2371007 + g 81 -12.7 -3.05066 | opp_overlap 2370988, overlap 2370980 TTTCACGGGCAAAGG CGCGGGA ATCA TCCCGCG TCTTACACGGTTCTT menB 2372447 - 2371590 - | naphthoate synthase yfbB 2373220 - 2372462 - | acyl-CoA thioester hydrolase YfbB menD 2374887 - 2373217 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase menF 2376268 - 2374973 - | menaquinone-specific isochorismate synthase TERM 3120 2375237 - 2375211 - G 71 -5.8 -4.30995 | gap 1 TGTTCTATAAAACAA CGCGCGGGTTC ACGAGG GATCCCG-GCG ACCGCTGCGGTAGGC TERM 3121 2375410 - 2375429 + g 74 -2.1 -5.00846 | opp_overlap 2375410 AGATGTCTTCGACAA CCAGC ATATTTTCTC GCTGG TTTTTATCGTCTTTC TERM 3122 2376306 - 2376290 - R 78 -6.5 -4.56597 | opp_overlap 2376302 2376303 2376305, overlap 2376291 2376302 CCTCCCTGTTAAAAA CCCCACA TTA TACGGGG TACTGCCCTAAAAAA STY2542 2376680 - 2376369 - | hypothetical protein TERM 3123 2376427 - 2376437 + g 81 -6.8 -4.72986 | opp_overlap 2376427 GCGCCTACGCCAATA CCCT GCC AGGG TTTTTCATGAACGTA STY2543 2377190 - 2376729 - | hypothetical protein TERM 3124 2376847 - 2376826 - G 72 -2.1 -4.84017 | AACCGCGCATAAAAA GGTTGCAGA TGCG CCTGCGCCC CCAGATATAGCGGCT STY2544 2377251 - 2378168 + | ribonuclease Z STY2545 2378234 - 2379238 + | putative receptor/regulator protein TERM 3125 2379334 - 2379363 + T 88 -12.3 -3.58577 | opp_overlap 2379340, overlap 2379340 ATGACATCAGGTAAT AAAAAACCCGCTT CGTG AAGCGGGTTTTTC GTTTTTACTTATTGC TERM 3126 2379357 - 2379340 - T 100 -11.3 -5.4833 | opp_overlap 2379334 2379340 TCAGGTAATAAAAAA CCCGCTT CGTG AAGCGGG TTTTTCGTTTTTACT TERM 3127 2379340 - 2379357 + T 100 -11.3 -5.1971 | opp_overlap 2379340, overlap 2379334 TCAGGTAATAAAAAA CCCGCTT CGTG AAGCGGG TTTTTCGTTTTTACT nuoN 2380836 - 2379379 - | NADH dehydrogenase subunit N TERM 3128 2380599 - 2380571 - G 83 -9.5 -4.18494 | CACGGGTAGGCAAAA GTACAGGTGGCGA GGC TCGCCAGCAGCAC CAGCCCGGTGTAGAG nuoM 2382372 - 2380843 - | NADH dehydrogenase subunit M TERM 3129 2382164 - 2382152 - G 70 -6.9 -4.18802 | ATAGAGATGCCAAAA CGCGG GAT CCACG GCAGGACAAATTCAG nuoL 2384527 - 2382686 - | NADH dehydrogenase subunit L nuoK 2384826 - 2384524 - | NADH dehydrogenase subunit K nuoJ 2385377 - 2384823 - | NADH dehydrogenase subunit J nuoI 2385930 - 2385388 - | NADH dehydrogenase subunit I nuoH 2386922 - 2385945 - | NADH dehydrogenase subunit H TERM 3130 2386774 - 2386735 - G 76 -12.8 -2.79679 | gap 1, opp_overlap 2386736 AACATCTTGATCATA TCCGCGACCAGCTGGAGCG AGC CGCCCCAGCCAA-CGCGGT TTGGTCCATAACGGT nuoG 2389651 - 2386919 - | NADH dehydrogenase subunit G TERM 3131 2388144 - 2388160 + g 74 -2.1 -5.00616 | CTACCGGCGTTAGTG CCGGAGA TAA TCAGCGG TTTTTTCGCGCCGGC TERM 3132 2389467 - 2389481 + g 70 -5.6 -4.46404 | ATCACCAGGCGACCA CGCGTA TCT TCCGCG TTTTGGTATTGCTTC nuoF 2391013 - 2389676 - | NADH dehydrogenase I subunit F nuoE 2391510 - 2391010 - | NADH dehydrogenase subunit E nuoC 2393315 - 2391513 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 3133 2393035 - 2393024 - G 73 -5.8 -4.37886 | overlap 2393032 2393033 TCAGGTGGTAGAAAA CGGA AAAA TCCG CGGCGGGTAACCCGT TERM 3134 2393056 - 2393032 - G 100 -9.1 -4.89729 | overlap 2393024 2393033 TAGAAAACGGAAAAA TCCGCGGCGGG TAA CCCGTCACGGT GCGTACGCAGGCGTT TERM 3135 2393055 - 2393033 - G 85 -12.6 -3.5221 | overlap 2393024 2393032 AGAAAACGGAAAAAT CCGCGGCGGG TAA CCCGTCACGG TGCGTACGCAGGCGT nuoB 2394064 - 2393402 - | NADH dehydrogenase subunit B TERM 3136 2393978 - 2394001 + g 95 -11 -4.57073 | overlap 2393968 GTTAACTTCCTGCTC CAGGGGGTCG GTTA CGATCTCCTG TTTTTGCAGGGGGTA nuoA 2394523 - 2394080 - | NADH dehydrogenase subunit A TERM 3137 2394225 - 2394211 - G 89 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCAACCCAGCCGC TERM 3138 2394626 - 2394608 - R 91 -2.4 -5.84381 | overlap 2394609 2394610 GGAGGAATAAAAAAA CCCTACAA TTA CTGTAGAA AATGATAAAAACAGC STY2559 2395068 - 2394916 - | hypothetical protein TERM 3139 2395109 - 2395076 - R 100 -9.6 -5.61596 | gap 1, opp_overlap 2395076 ATGGGCACAAAAAAA GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC TTTTTTACATTTACG TERM 3140 2395076 - 2395109 + r 91 -7.4 -5.22039 | gap 1, opp_overlap 2395076 ATGGGCACAAAAAAA GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC TTTTTTACATTTACG lrhA 2396086 - 2395148 - | NADH dehydrogenase operon transcriptional regulator TERM 3141 2396007 - 2395984 - G 71 -11.6 -2.96395 | opp_overlap 2395984 ACTGAGTACGACATA CCGCCGCCGC CGCC GCGGCGAAGG TGTTCAGATCGGCAA STY2561 2397018 - 2398232 + | aminotransferase AlaT TERM 3142 2398240 - 2398263 + F 86 -14 -3.20348 | opp_overlap 2398240 2398233 ATCAATAATCTTAAA TTCAGGCTAC TTCG GTAGCCTGAA TTGCATCTTCATCAC TERM 3143 2398263 - 2398240 - f 100 -14 -3.72453 | opp_overlap 2398240, overlap 2398233 ATCAATAATCTTAAA TTCAGGCTAC TTCG GTAGCCTGAA TTGCATCTTCATCAC TERM 3144 2398642 - 2398621 - g 80 -4.3 -5.10497 | opp_overlap 2398625, overlap 2398608 AAGCGATCGAAAAAA TCGCCCAGC AAAA GCTGGTTGA TATGGCGCCGGATGA STY2562 2398326 - 2398925 + | hypothetical protein TERM 3145 2398974 - 2399001 + T 87 -10.6 -4.09685 | gap 1 ACCGTTCTTCCCGTA GGCCTGATAAGCG TAG CGCC-ATCAGGCC TTTTCCAGCCTGGGG STY2563 2400843 - 2399017 - | putative sodium/sulphate transporter TERM 3146 2399182 - 2399167 - G 86 -11.8 -3.86194 | overlap 2399154 AACCGGCGTCATAAA GGCGGC GGAT GCCGCC ATCGCTACTGCCATC TERM 3147 2399758 - 2399772 + g 77 -11.4 -3.53012 | CAGCGACCCTTCCAG CGCGAC GCC GTCGCG TTTCAGGCCGACCAC TERM 3148 2400230 - 2400240 + g 77 -8.2 -4.13767 | overlap 2400205 CCGGCCTGTTGTCCG GGCG CAT CGCC TTTTAGCATGAAGCG TERM 3149 2400912 - 2400889 - R 100 -16.8 -3.86346 | opp_overlap 2400878 2400875 2400891 TGATTCTGCCATAAA TATGCCCCGC CAGG GCGGGGCATA TCATGATCAGGTCTT TERM 3150 2400891 - 2400910 + r 93 -15 -2.82834 | opp_overlap 2400889, overlap 2400878 2400875 ATTCTGCCATAAATA TGCCCCGC CAGG GCGGGGCA TATCATGATCAGGTC STY2564 2401578 - 2400919 - | putative phosphatase STY2565 2402083 - 2401589 - | hypothetical protein TERM 3151 2402121 - 2402140 + r 93 -10.8 -4.55689 | opp_overlap 2402121 TGGCGATGAAAAAAA GAAGGCAT TGGT ATGCCTTC TTTTATATGCGTAAT TERM 3152 2402140 - 2402121 - R 100 -10.8 -5.52384 | opp_overlap 2402121 TGGCGATGAAAAAAA GAAGGCAT TGGT ATGCCTTC TTTTATATGCGTAAT STY2566 2402621 - 2402166 - | hypothetical protein TERM 3153 2402487 - 2402508 + g 80 -8.7 -4.07568 | opp_overlap 2402475 2402501, overlap 2402488 AAATCGTATGGCATA GCGCGTCAT ACGA ATGACGCGG TTTTCGACGAAAACG TERM 3154 2402488 - 2402507 + g 76 -12.2 -3.04398 | opp_overlap 2402475 2402501, overlap 2402487 AATCGTATGGCATAG CGCGTCAT ACGA ATGACGCG GTTTTCGACGAAAAC TERM 3155 2403414 - 2403395 - g 79 -3.4 -5.19879 | opp_overlap 2403398 GCTGAAAGATAAAAA CGTCGCCG TGTT CGACACCG CCTTCCATCAGACCA TERM 3156 2403790 - 2403766 - g 70 -2.7 -4.76075 | overlap 2403757 2403767 ATCAGATCAACAAAA TGCTGACCAAA GAG TCCGGTCTGCT GGGTCTGACTGAAGT ackA 2402961 - 2404163 + | acetate kinase TERM 3157 2404167 - 2404194 + F 100 -16.4 -4.37886 | gap 1, overlap 2404169 CTGACTGCCTGATTT CA-CACCGCCAGC CTC GCTGGCGGTGCTG TTTTGTAACCCGTCC TERM 3158 2404169 - 2404191 + F 100 -19.2 -2.8733 | overlap 2404167 GACTGCCTGATTTCA CACCGCCAGC CTC GCTGGCGGTG CTGTTTTGTAACCCG pta 2404240 - 2406384 + | phosphate acetyltransferase TERM 3159 2407164 - 2407131 - g 79 -13.3 -2.70932 | gap 1, overlap 2407136 TCGCCTTTGCAATTA TCATAGCCCCGC-TGA TGG TCAGGCTGGGCTATGA CAGCATTACCACCGT TERM 3160 2407667 - 2407683 + G 74 -7.2 -4.07687 | AGGATGATGATCGCG CCCGCC TTGCT GGTGGG TTTTGCCAAAGGCAT STY2569 2406602 - 2408122 + | hypothetical protein TERM 3161 2408158 - 2408130 - T 95 -11.8 -4.20084 | gap 1, opp_overlap 2408129 ATCATTGATCCAAAA TGCCGGATGAGCA TCAG CGC-CATCCGGCA ATATCTCCATGATTA STY2570 2409124 - 2408171 - | putative transketolase C-terminal section TERM 3162 2408363 - 2408379 + g 84 -5.7 -5.03715 | overlap 2408376 ACTGTGGTTTTCACA CGTGACG ATA CGCCGCG TTTTTTCCGCGTAGT TERM 3163 2408855 - 2408844 - G 71 -5.8 -4.28018 | overlap 2408833 AAGAGCTGATCAAAA CAGC GACG GCTG GCAAAAGCGGTAAAG STY2571 2409947 - 2409117 - | putative transketolase N-terminal section TERM 3164 2409309 - 2409323 + g 71 -10 -3.57144 | opp_overlap 2409296, overlap 2409296 CACCGCCAGTAGTCC GGCGAT ATC ATCGCC TTTGACGGTGACGAC TERM 3165 2409602 - 2409628 + g 73 -5.1 -4.58395 | overlap 2409603 2409605 TGCCTTGTCCCAGTG AGC-CGGTCGTGG CGT CCACG-CCGTGCG TTTTTAGCCGATCCG ulaA 2411341 - 2409944 - | ascorbate-specific PTS system enzyme IIC STY2573 2411628 - 2411356 - | putative sugar phosphotransferase component II B STY2574 2412152 - 2411709 - | putative sugar phosphotransferase component II A TERM 3166 2413399 - 2413370 - g 74 -10.1 -3.74224 | gap 1, opp_overlap 2413370 GTTAAATCAGGGAAA CTGGA-GCGATCGA AAA TCTATCGCCTCCAG TTTATGTATGCGGGA TERM 3167 2413370 - 2413399 + G 83 -10.1 -4.12532 | gap 1, opp_overlap 2413370 GTTAAATCAGGGAAA CTGGA-GCGATCGA AAA TCTATCGCCTCCAG TTTATGTATGCGGGA STY2575 2412405 - 2413424 + | putative transcriptional regulator STY2576 2413984 - 2413430 - | hypothetical protein TERM 3168 2413455 - 2413469 + g 75 -6.4 -4.66833 | overlap 2413435 2413456 TCTTCCGGTTTCTCC TGAAGC GCG GCTTCG TTTTTGGCGTTGCGG STY2577 2414592 - 2414041 - | phosphodiesterase STY2578 2415292 - 2414648 - | putative glutathione-S transferase TERM 3169 2414883 - 2414899 + g 84 -5.7 -5.00616 | overlap 2414873 GCACTGGCTTTTCCA GCCTCGC TTA GCGGCGC TTTTTTCGCCCCGGC TERM 3170 2414985 - 2414998 + g 100 -9.5 -4.88736 | CACGCCTGAATCTGT CGCGC GCGG GCGCG TTTTTGTAAATCGTG TERM 3171 2415181 - 2415205 + g 81 -3.6 -5.22006 | CCTGGTCCAGATCGC GGGTTTTC AGAGTAAAG GAAAGCCC TTTTTCTTGTAATGC TERM 3172 2415267 - 2415254 - G 74 -2.3 -4.99035 | GTAGGGAGAGAAAAA GTTCG CATC CGACC ACAGCACAATAACAG STY2579 2415435 - 2416082 + | putative glutathione-S transferase TERM 3173 2416911 - 2416941 + G 83 -12.4 -3.68222 | overlap 2416912 GAGCAGTTTGCTCAT GCGCTGGGTCGCGC GCT GCGCCGCCCGGCGA TTATTCGCATTCCGG TERM 3174 2416912 - 2416940 + G 86 -15.9 -2.80612 | overlap 2416911 AGCAGTTTGCTCATG CGCTGGGTCGCGC GCT GCGCCGCCCGGCG ATTATTCGCATTCCG TERM 3175 2417040 - 2417028 - g 80 -9.1 -4.07568 | CGGGCGCTGCCAAAA CGGCT TGA AGCCG CCGGATTCGCATTTC STY2580 2416206 - 2417099 + | hypothetical protein TERM 3176 2417120 - 2417145 + T 86 -8.9 -4.54026 | gap 1 AAAGCGCCGTATCCT GCCCGGTAAGCG ATG CGCC-GCCGGGC TTCTTTTATTTCAGC hisP 2417927 - 2417151 - | histidine/lysine/arginine/ornithine transporter subunit TERM 3177 2417741 - 2417756 + g 71 -4.6 -4.57341 | opp_overlap 2417741, overlap 2417747 GACCGTTCACGATAA TCGCGC CTTC GCTCGA TTTTTCGAGGAAGTT hisM 2418645 - 2417938 - | histidine transport system permease hisQ 2419328 - 2418642 - | histidine transport system permease protein TERM 3178 2418821 - 2418839 + g 70 -8.8 -3.71378 | overlap 2418819 CTTCCAGGCCCAGCA GCGACACC AGC GCTGTCGC TTTGAGTATCACCTG hisJ 2420293 - 2419511 - | histidine-binding periplasmic protein TERM 3179 2420400 - 2420361 - R 71 -10 -3.14564 | opp_overlap 2420362 2420364, overlap 2420364 2420373 CTATCGTGCCATTAA TCAGGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCCGGT TTATTTTGCATAAAA TERM 3180 2420362 - 2420399 + r 80 -6.9 -4.68908 | opp_overlap 2420361 2420364 2420373, overlap 2420364 TATCGTGCCATTAAT CAGGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCCGG TTTATTTTGCATAAA TERM 3181 2420397 - 2420364 - R 87 -14.7 -2.77899 | opp_overlap 2420364 2420362, overlap 2420361 2420373 TCGTGCCATTAATCA GGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCC GGTTTATTTTGCATA TERM 3182 2420493 - 2420470 - R 100 -10.4 -4.7497 | opp_overlap 2420455 2420489 CTTATGCACCAAAAA GGTGCAAAAC ATCT ATTTTGCACC GTGATAGTTCCCCAG argT 2421313 - 2420531 - | lysine-arginine-ornithine-binding periplasmic protein precursor TERM 3183 2421569 - 2421551 - R 95 -13.2 -4.37092 | ATCGCGGTTACAAAA TTGCCCTG AAA CAGGGCAA CAGGGACAATAATGC ubiX 2422171 - 2421602 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3184 2421731 - 2421720 - G 91 -7.2 -4.87786 | GGAAGGTGATAAAAA GCCG GAAC CGGC GGCATAATCACCGCG STY2587 2423604 - 2422315 - | putative amino acid permease TERM 3185 2422877 - 2422851 - G 77 -3.7 -5.07652 | overlap 2422846 GGCCGTAAAACAAAA TGATTCTGAGA CCGAT CCCCAGGATCA CCTTCGGTAAAATAA TERM 3186 2423662 - 2423636 - R 79 -11.4 -3.38046 | opp_overlap 2423638, overlap 2423634 2423637 2423651 TCGTGAGGTCAAAGA TGCCGCCGCGAC ATA GCCGCGGCGGTT ATGCGTTAACGCGTA TERM 3187 2423661 - 2423637 - R 86 -14.9 -2.62613 | opp_overlap 2423638, overlap 2423636 2423634 2423651 CGTGAGGTCAAAGAT GCCGCCGCGAC ATA GCCGCGGCGGT TATGCGTTAACGCGT TERM 3188 2423638 - 2423660 + r 100 -16.2 -3.41878 | opp_overlap 2423637 2423636 2423634 2423651 GTGAGGTCAAAGATG CCGCCGCGAC ATA GCCGCGGCGG TTATGCGTTAACGCG STY2588 2424771 - 2423668 - | hypothetical protein TERM 3189 2423954 - 2423970 + g 100 -13.7 -3.94853 | opp_overlap 2423937 TCGACGCCCAGCTCC CCGACCG GGA CGGTCGG TTTACTGTTCAGTTC TERM 3190 2424228 - 2424186 - G 80 -10.5 -3.85817 | gap 1, overlap 2424204 AGTTTCCCGCAGAAA GCCGCCGGACAGGAATACCG CTGT CAGC-TTCCAGCCGGGCGGC CAGCGCCAGAAAATC STY2589 2426194 - 2424773 - | putative amino acid transporter STY2590 2427682 - 2426285 - | putative amino acid decarboxylase TERM 3191 2426639 - 2426607 - G 77 -7.8 -4.25566 | gap 1, overlap 2426597 AAGAACCAGTCAAAA TGCTGGCTATCAGAG AGTA CGCTG-TAACCAGCA TCGACAAATTTCCAT STY2591 2427893 - 2429320 + | putative transcriptional regulator purF 2430873 - 2429356 - | amidophosphoribosyltransferase cvpA 2431399 - 2430911 - | colicin V production protein TERM 3192 2431527 - 2431502 - R 100 -9.8 -5.27938 | ACGCGTAAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCACACTTTTTATCT dedD 2432384 - 2431710 - | hypothetical protein folC 2433642 - 2432374 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 3193 2433618 - 2433594 - G 70 -5.5 -4.38927 | TTTCCAGATAAGAAA GCCACGAGGCC AGG GGCGACGCAGC TTGAGGTATAGATTT TERM 3194 2433704 - 2433672 - R 100 -17.1 -3.06515 | opp_overlap 2433677, overlap 2433677 CTTTACGGTGAAAAG CAAAAGGGCAGAGCC TGC GGCCCTGCCCTTTTC AGTTATCAGGCCTCA TERM 3195 2433677 - 2433699 + r 100 -14.8 -4.3208 | opp_overlap 2433672 2433677 CGGTGAAAAGCAAAA GGGCAGAGCC TGC GGCCCTGCCC TTTTCAGTTATCAGG TERM 3196 2433699 - 2433677 - R 100 -17 -4.67038 | opp_overlap 2433677, overlap 2433672 CGGTGAAAAGCAAAA GGGCAGAGCC TGC GGCCCTGCCC TTTTCAGTTATCAGG accD 2434624 - 2433710 - | acetyl-CoA carboxylase subunit beta TERM 3197 2434762 - 2434750 - R 77 -3.3 -5.24531 | opp_overlap 2434750 ACTTTGGATAAAAAA GTGGT CGA ACCGC TGAGTTACTTTCTAT dedA 2435433 - 2434774 - | hypothetical protein truA 2436294 - 2435482 - | tRNA pseudouridine synthase A usg 2437307 - 2436294 - | putative semialdehyde dehydrogenase TERM 3198 2437362 - 2437333 - R 86 -11.5 -3.80279 | gap 1, opp_overlap 2437333, overlap 2437326 TCCAGAAATACATAA GCGTCCCTGTCGCA TTA TTCGACAGGGA-GC ATTAAGAAGACATTA pdxB 2438511 - 2437375 - | erythronate-4-phosphate dehydrogenase TERM 3199 2438832 - 2438809 - g 90 -5.9 -5.24129 | overlap 2438813 TCTGGGGATAAAAAA TGACGCGCC GCTACT GTCGCGCCA CTTCCCCGCCGCTGA TERM 3200 2439575 - 2439596 + G 70 -5.1 -4.45517 | GGCCTGTTGTTTATC GCGCTAATA ATTG TACTGGCGC TTTTCTGGCTGGTTT div 2438615 - 2439616 + | flagella biosynthesis regulator STY2603 2440791 - 2439613 - | hypothetical protein TERM 3201 2439783 - 2439804 + g 95 -14.5 -3.54424 | CGCCGAGCGCCGTAC CGCGTACCT GTGC AGGTACGCG TTTCACAACCTCCAC TERM 3202 2440324 - 2440288 - G 71 -10.7 -3.22298 | GCTATGGATCAGCAA GCCCAACGGCGCACCGG CCG CCAGCGCGCCGTAAATC GCCATCCCGTTCCAC STY2604 2441345 - 2440971 - | putative bacteriophage protein TERM 3203 2441369 - 2441384 + H 70 -4.8 -4.40561 | overlap 2441366 TTCCTTTCCCCTGAT GAAATA AAAA TATTTC TTCTTTTTCGCGAAA TERM 3204 2441493 - 2441480 - H 72 -5.3 -4.62336 | ATTTTATCTTAAAAA TATCG GCGC CGATA ACACATCTTCTTAGG TERM 3205 2441541 - 2441530 - g 83 -5.8 -4.90013 | GAATGGAACCAAAAA GCCA AGAC TGGC ATCGTGCAGATATTA STY2605 2441517 - 2441765 + | putative DNA-binding protein TERM 3206 2441894 - 2441913 + F 82 -8 -4.63218 | opp_overlap 2441893 2441882 ATACTGTTAAAGCAT TACGTAAT TGCT ATTACGTA TTTTATTAACAGGAA STY2606 2441934 - 2442302 + | hypothetical protein TERM 3207 2442664 - 2442626 - g 76 -5.3 -4.82901 | gap 1, opp_overlap 2442658, overlap 2442602 CTCGGCGGAGAAAAA GTGGATGTTCTGTTGGCT ACAG AGTCAAC-GCCCATCCAC CTGGAAGTTTATACC STY2607 2442302 - 2442820 + | putative lipoprotein STY2608 2443543 - 2442887 - | hypothetical protein TERM 3208 2443606 - 2443587 - R 100 -13.6 -5.26875 | opp_overlap 2443587 CCCTGAATGAAAAAA CAGGTCGC ATTA GCGACCTG TTTCATTGTTGATAC TERM 3209 2443587 - 2443606 + r 100 -13.6 -4.09805 | opp_overlap 2443587 CCCTGAATGAAAAAA CAGGTCGC ATTA GCGACCTG TTTCATTGTTGATAC fabB 2444855 - 2443641 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 3210 2445119 - 2445135 + G 74 -2.1 -5.06414 | TAATGACAATGGACT CGAAGAG ACA CGCTACG TTTTTCTTGGCGGCA TERM 3211 2446427 - 2446440 + G 76 -9.5 -3.89346 | opp_overlap 2446426 CCGTTTTGATCAGAC CCGGC CGCT GCCGG TTTATGCCGTCGGGG mnmC 2445015 - 2447015 + | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 3212 2447057 - 2447030 - T 75 -11.2 -3.08798 | ATGGGCCAGTCAATA GCGGAAGGCGGC AAGC GTCGCCTTCCGG TCCACGGCGTTATTG STY2611 2447342 - 2447067 - | hypothetical protein yfcA 2448733 - 2447924 - | hypothetical protein TERM 3213 2448257 - 2448239 - G 70 -6.6 -4.16943 | overlap 2448224 CGCCAGAGCGTAAAA CGACCCTG CGG CAGGCCCG AAAAAGCCGTCGTAA mepA 2449557 - 2448733 - | penicillin-insensitive murein endopeptidase TERM 3214 2449534 - 2449547 + g 100 -3.7 -5.77856 | GACAAACCATGCCAG CAGCG CAAT CGCGG TTTTTTTCATTTCTT aroC 2450646 - 2449561 - | chorismate synthase STY2617 2451614 - 2450682 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 3215 2451807 - 2451793 - g 95 -5.6 -5.34655 | overlap 2451795 GAATGAAAAAGAAAA CATCGC TCA GCGAGG AGGACCAGGCGCTGT TERM 3216 2451805 - 2451795 - g 74 -6.8 -4.26857 | overlap 2451793 ATGAAAAAGAAAACA TCGC TCA GCGA GGAGGACCAGGCGCT STY2618 2451780 - 2452331 + | hypothetical protein STY2619 2452865 - 2452380 - | phosphohistidine phosphatase fadJ 2455221 - 2453074 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3217 2453424 - 2453436 + g 93 -4.8 -5.46698 | opp_overlap 2453424 TAAGCTTATAAATAG CAGG GTCAA CCTG TTTTTTGCTTTTACG TERM 3218 2453770 - 2453784 + g 91 -7.8 -5.01732 | ATCACTGACGACTAT CGGGGT TTT ACCCTG TTTTTTCGCCAGCTT TERM 3219 2454375 - 2454360 - G 100 -5.4 -5.76949 | gap 1, overlap 2454362 2454364 TACTGGCAAAAAAAA CAG-CGC GCA GCGCCTG CGATTGCGGCGTCAT TERM 3220 2454372 - 2454362 - G 87 -8.2 -4.52949 | overlap 2454360 2454364 CTGGCAAAAAAAACA GCGC GCA GCGC CTGCGATTGCGGCGT TERM 3221 2454484 - 2454503 + g 76 -3.4 -5.02476 | overlap 2454479 AATGATCCGCTCCGT CGCCGGAT AATT ACCCTGCG TTTTTTGCGCCGTCT fadI 2456531 - 2455221 - | 3-ketoacyl-CoA thiolase TERM 3222 2455701 - 2455688 - G 76 -9.5 -3.84406 | opp_overlap 2455697 CGGTCATCAGAATAA CGGCG GCAG CGCCG TCGGTCAGCGGTGTA TERM 3223 2456698 - 2456662 - R 100 -9.4 -5.75599 | overlap 2456667 GAAACGACAAAAAAA GAAAACGCCTCCGCCA GATGA TGACGGAGGCGTCGTG AATGAACGGATTAAC TERM 3224 2456693 - 2456667 - R 100 -15.9 -5.61277 | overlap 2456662 GACAAAAAAAGAAAA CGCCTCCGCCA GATGA TGACGGAGGCG TCGTGAATGAACGGA STY2622 2456993 - 2456709 - | hypothetical protein TERM 3225 2457154 - 2457139 - H 82 -3.2 -5.48213 | GATCTAAAACAAAAA TCACGC GATC GGGTGA CCGTTAAGCCCGCCG TERM 3226 2457964 - 2457949 - g 72 -11.8 -2.68823 | opp_overlap 2457955, overlap 2457948 GTCGCGGCACAGAAT CCGGCG CTGG CGCCGG TCGCGGGTCAGATTC fadL 2457358 - 2458671 + | long-chain fatty acid outer membrane transporter TERM 3227 2458690 - 2458720 + T 86 -11.3 -3.78351 | opp_overlap 2458696, overlap 2458696 CTTTCTGAAACGGAT CAAAAAGGTGAGC ATTGC GCTCACCTTTTTA TTTACTGCCGTTTAT TERM 3228 2458696 - 2458714 + T 100 -10.3 -5.33405 | opp_overlap 2458696, overlap 2458690 GAAACGGATCAAAAA GGTGAGC ATTGC GCTCACC TTTTTATTTACTGCC TERM 3229 2458714 - 2458696 - T 100 -11 -4.78764 | opp_overlap 2458690 2458696 GAAACGGATCAAAAA GGTGAGCA TTG CGCTCACC TTTTTATTTACTGCC vacJ 2459487 - 2458732 - | VacJ lipoprotein precursor TERM 3230 2458761 - 2458783 + g 71 -6.3 -4.2679 | gap 1, overlap 2458735 TCTCTTTGAGTTCGT CCTGAATCGC TTGC GCG-TTCGGG TTTTCCTGCGGCTTG yfdC 2459776 - 2460717 + | hypothetical protein TERM 3231 2460785 - 2460773 - f 81 -3.3 -5.4505 | CCGGCGAATAAAAAA CGCTA TAC TGGCG CCGCGTTGTCCCCTT TERM 3232 2461629 - 2461648 + F 95 -2.8 -5.8901 | TTGTCGAAATCGAAG GGATGGGA CATG TGCCATTC TTTTTTATTTTATGT TERM 3233 2461780 - 2461743 - f 72 -2.9 -5.00616 | overlap 2461765 CTCTCTCTGAAAAAA CATGCAAAGCCTT GTAAGACGATGT AAAGCTTTACATG TCCCGTTTTTATTCC TERM 3234 2461823 - 2461843 + F 75 -11.3 -3.07895 | opp_overlap 2461823 AATCAGCAATACCAA TTGATCGAT AAC ATCGATCAA TATATTAAAACTCAA TERM 3235 2461843 - 2461823 - f 79 -11.3 -3.40565 | opp_overlap 2461823 AATCAGCAATACCAA TTGATCGAT AAC ATCGATCAA TATATTAAAACTCAA gtrA2 2461960 - 2462349 + | bactoprenol-linked glucose transferase TERM 3236 2464171 - 2464161 - g 71 -4.6 -4.53225 | opp_overlap 2464169 ATTAAAAAAATTAAA GAGG CAT CCCC TGACTCAAGGATTGT STY2629 2462589 - 2464511 + | putative lipopolysaccharide modification acyltransferase TERM 3237 2464608 - 2464585 - T 81 -12.4 -3.29471 | CTGCCACTATATTAA CGGTGATCGC TCAG GCGGTCACCG AACTCGATAATAAAG TERM 3238 2465981 - 2465950 - T 84 -8.7 -4.72986 | overlap 2465952 CACGTTCAGCAAAAA GTCGTCATCGGCC GGTTAT GACCGATGACATC CCGATGTGGTCTAGA pgtE 2466930 - 2465992 - | outer membrane protease pgtA 2468445 - 2467198 - | phosphoglycerate transport system transcriptional regulatory protein PgtA TERM 3239 2468114 - 2468127 + g 73 -5.2 -4.57073 | AATATCAACAGTTTG CCCG GATCGA CGGG TTTTTGCAGAAAATC pgtB 2470441 - 2468435 - | phosphoglycerate transport system sensor protein PgtB TERM 3240 2469528 - 2469559 + g 78 -6.5 -4.56597 | gap 1, opp_overlap 2469515 AAGCGCCCTAGCGTA GCCTCTCTGG-CGC GGCTG GCGTCCAGTAAGGC TTTTTGCGCCGCAAC pgtC 2471631 - 2470438 - | phosphoglycerate transport regulatory protein PgtC precursor TERM 3241 2472571 - 2472593 + G 74 -7.6 -4.1964 | overlap 2472562 GTTGGCGGCGGGATC GTCGCGCCTA TCG TCGGTGCGGC TTTTGCGATATTGGG pgtP 2472067 - 2473458 + | phosphoglycerate transporter protein TERM 3242 2473503 - 2473485 - T 100 -16 -3.65812 | opp_overlap 2473485 TCCCGGGGAACAGAA GCGCCGAC ATT GTCGGCGC TATCTATTCGCTGAC TERM 3243 2473485 - 2473503 + T 93 -16 -3.11072 | opp_overlap 2473485 TCCCGGGGAACAGAA GCGCCGAC ATT GTCGGCGC TATCTATTCGCTGAC STY2638 2473939 - 2473697 - | hypothetical protein STY2639 2474460 - 2475380 + | lipid A biosynthesis palmitoleoyl acyltransferase TERM 3244 2475380 - 2475401 + T 80 -7.3 -4.61566 | opp_overlap 2475385, overlap 2475385 GTCACTCTACATCTG AAAAAGGCC GCAA GGCCTTTTA TTTTGTCATTTCGCA TERM 3245 2475396 - 2475385 - T 80 -7.2 -4.64766 | opp_overlap 2475380 2475385 TCTACATCTGAAAAA GGCC GCAA GGCC TTTTATTTTGTCATT TERM 3246 2475385 - 2475396 + T 87 -7.2 -5.22137 | opp_overlap 2475385, overlap 2475380 TCTACATCTGAAAAA GGCC GCAA GGCC TTTTATTTTGTCATT TERM 3247 2475469 - 2475484 + T 86 -4.6 -5.60864 | overlap 2475471 CTTTTAGCGATAAGT CTCCTG TTTA CAGGCG TTTTTTTACTGTGTC TERM 3248 2475897 - 2475873 - T 90 -9.9 -4.51765 | opp_overlap 2475876, overlap 2475875 2475876 TACAATGCAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 3249 2475895 - 2475875 - T 95 -12.5 -3.8535 | opp_overlap 2475876, overlap 2475873 2475876 CAATGCAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 3250 2475894 - 2475876 - T 93 -16 -2.90126 | opp_overlap 2475876, overlap 2475875 2475873 AATGCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 3251 2475876 - 2475894 + T 100 -16 -4.91109 | opp_overlap 2475876 2475875 2475873 AATGCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 2476434 - 2475976 - | transposase for insertion sequence element IS200 TERM 3252 2476547 - 2476565 + r 100 -16 -4.18018 | opp_overlap 2476537 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 3253 2476579 - 2476608 + r 86 -9.3 -4.4767 | opp_overlap 2476584, overlap 2476584 GGTTTTCCATAGACA AAAAACAGGAGCC ATGG GGCTCCTGTTTGC TTTTCTACTCCGTGC TERM 3254 2476603 - 2476584 - R 100 -13.6 -5.4251 | opp_overlap 2476579 2476584 TCCATAGACAAAAAA CAGGAGCC ATGG GGCTCCTG TTTGCTTTTCTACTC TERM 3255 2476584 - 2476603 + r 100 -13.6 -4.28487 | opp_overlap 2476584, overlap 2476579 TCCATAGACAAAAAA CAGGAGCC ATGG GGCTCCTG TTTGCTTTTCTACTC STY2642 2477851 - 2476613 - | aminotransferase TERM 3256 2477632 - 2477619 - G 71 -9.5 -3.53091 | overlap 2477605 ATCGCGCGGCGTAAA CGCGG TATG CCGCG GGACGTGGAATAACC TERM 3257 2477745 - 2477766 + g 71 -5.7 -4.27316 | AAATCAATAATATCT TCGCCGCGC CGAC GCGCAGCCA TTTTGAGTTCAGCGG TERM 3258 2478465 - 2478449 - R 100 -13.7 -5.95166 | opp_overlap 2478449 GGCAATGAAAAAAAA CCGCGTG AGG CACGCGG TTTGAGACTGACAAG TERM 3259 2478449 - 2478465 + r 93 -13.7 -3.57144 | opp_overlap 2478449 GGCAATGAAAAAAAA CCGCGTG AGG CACGCGG TTTGAGACTGACAAG TERM 3260 2478507 - 2478554 + r 82 -12.9 -2.91593 | gap 1, opp_overlap 2478552, overlap 2478508 TTGCCTGATGACGCT GCGCTTATCAGGCCTACAGATG ACACA CTTTTGTAGGCCGGATAAG-GC GTTTATGCCGCCGTC TERM 3261 2478508 - 2478555 + r 95 -12.9 -3.86524 | gap 1, opp_overlap 2478552, overlap 2478507 TGCCTGATGACGCTG CG-CTTATCAGGCCTACAGATG ACACA CTTTTGTAGGCCGGATAAGGCG TTTATGCCGCCGTCT glk 2479539 - 2478574 - | glucokinase TERM 3262 2479494 - 2479444 - G 76 -11.8 -3.03243 | opp_overlap 2479429, overlap 2479434 2479493 ATCCAGGCCGGAATA CGTTTTGGCCTGCGAGATTTCTCC ACT GGCGATATCACACAGGGCAAGACG CGCATTCGTGCCGCC TERM 3263 2480695 - 2480667 - g 71 -9.6 -3.53444 | gap 1, opp_overlap 2480675 TTAGCCGTCGTCAAA CTCGCCG-CGC TGGTCATC GCGGCGGCGAG CGGCTTTCGCGGCGG STY2645 2479743 - 2480978 + | hypothetical protein STY2646 2482650 - 2480998 - | putative decarboxylase TERM 3264 2481488 - 2481456 - G 89 -13.4 -3.50853 | overlap 2481474 2481478 GCGGCTGAACCACAA CTTCCGCGCCGTCA GGAAG CGACAGCGCGGCAG CGCCAAAGGCGGCGG TERM 3265 2482294 - 2482277 - G 74 -3.4 -4.85599 | opp_overlap 2482289, overlap 2482278 CTCATGCGATAAAAA TGACGA AAATCG CCGTCA CCGAGGGTATGGTGC TERM 3266 2482778 - 2482766 - H 70 -4.7 -4.49756 | CGGCAAACAGTAAAA GCCGG ATA CCGCC TGGCGAGTGTAACCG STY2647 2482830 - 2483828 + | putative ion-channel protein STY2648 2483942 - 2484268 + | hypothetical protein TERM 3267 2484314 - 2484285 - T 72 -9.4 -3.61398 | opp_overlap 2484285 2484282 2484280 2484286, overlap 2484287 CCTCCTGCTGAATAA CA-GCCCGATGACG CCCA CG-CATCGGGCCTG CTATCTTTCTGTCTT TERM 3268 2484311 - 2484287 - T 85 -12.2 -3.38812 | gap 1, opp_overlap 2484286 2484285 2484282 2484280, overlap 2484285 TCCTGCTGAATAACA GCCCGATGACG CCCA CG-CATCGGGC CTGCTATCTTTCTGT mntH 2485570 - 2484329 - | manganese transport protein MntH TERM 3269 2484803 - 2484791 - G 86 -10.5 -4.19735 | GCCGCTAAAATGAAA CGCCG CCG CGGCG GTCGCCATCATTGCC TERM 3270 2485098 - 2485087 - G 72 -3.6 -4.82901 | CGGCGGCGACAAAAA GCAG TAAA CCGC CGATGACTTTTTCAA TERM 3271 2485601 - 2485586 - H 82 -7.6 -4.56597 | opp_overlap 2485586 CTTTTGCCTCAAAAA CATAGC CTTT GCTATG TTTCATGCTATGTTC TERM 3272 2485586 - 2485601 + H 71 -7.6 -3.8448 | opp_overlap 2485586 CTTTTGCCTCAAAAA CATAGC CTTT GCTATG TTTCATGCTATGTTC TERM 3273 2486506 - 2486527 + G 74 -7.3 -4.12397 | TGTGGTCGCAGCGCT GGTTCTGAA CATG TTCAGCACC TTTATCGTTCTGTCG nupC 2485913 - 2487115 + | nucleoside permease NupC TERM 3274 2487153 - 2487136 - T 95 -12.7 -3.97368 | opp_overlap 2487136 CGTTTAATGTAGAAA CCGGGGA GCTA TCCCCGG TTTTTTTATGCCGCT TERM 3275 2487136 - 2487153 + T 100 -12.7 -5.61596 | opp_overlap 2487136 CGTTTAATGTAGAAA CCGGGGA GCTA TCCCCGG TTTTTTTATGCCGCT yfeA 2489357 - 2487168 - | hypothetical protein TERM 3276 2487387 - 2487398 + g 74 -7.2 -4.15106 | GATTTTAATGATGTC CGCC TTGA GGCG TTTTAGCCGTTCATA TERM 3277 2487666 - 2487637 - G 81 -7 -4.788 | AAATTAACCGAAAAA CGCGCCCCCTGC TCCGCC GAAGGATGCGCG GACAACCATTGCAGG TERM 3278 2487870 - 2487845 - G 70 -5.4 -4.52589 | gap 1, overlap 2487846 2487848 GTTGCGCATACAAAA CCAGCGCGCCG CGCTC CAGCGC-CTGA CGGATTTTCTGCAAC TERM 3279 2489519 - 2489538 + H 72 -9.2 -3.61764 | opp_overlap 2489519 GACAAAAAGCAAAAA CCCCCGCT TTTC AGCGAGGG TTTGAACGTTGGTGG TERM 3280 2489538 - 2489519 - H 100 -11.4 -5.2197 | opp_overlap 2489519 GACAAAAAGCAAAAA CCCCCGCT TTTC AGCGAGGG TTTGAACGTTGGTGG yfeC 2489963 - 2490325 + | hypothetical protein yfeD 2490327 - 2490719 + | hypothetical protein TERM 3281 2490758 - 2490724 - T 95 -11.6 -4.2461 | opp_overlap 2490727 2490731, overlap 2490727 2490731 AGGCGGACTAACAAA TAATAAACGGCAGG CGTCTGC CCTGCCGTTTATTC TGTTTCAGCTGGCGT TERM 3282 2490755 - 2490727 - T 95 -13.3 -4.24413 | opp_overlap 2490727 2490731, overlap 2490724 2490731 CGGACTAACAAATAA TAAACGGCAGG CGTCTGC CCTGCCGTTTA TTCTGTTTCAGCTGG TERM 3283 2490727 - 2490755 + T 95 -13.3 -3.82946 | opp_overlap 2490727 2490724 2490731, overlap 2490731 CGGACTAACAAATAA TAAACGGCAGG CGTCTGC CCTGCCGTTTA TTCTGTTTCAGCTGG TERM 3284 2490751 - 2490731 - T 93 -9.7 -4.67968 | opp_overlap 2490727 2490731, overlap 2490727 2490724 CTAACAAATAATAAA CGGCAGG CGTCTGC CCTGCCG TTTATTCTGTTTCAG TERM 3285 2490731 - 2490751 + T 90 -9.7 -4.52143 | opp_overlap 2490731 2490727 2490724, overlap 2490727 CTAACAAATAATAAA CGGCAGG CGTCTGC CCTGCCG TTTATTCTGTTTCAG gltX 2492187 - 2490763 - | glutamyl-tRNA synthetase TERM 3286 2491036 - 2491053 + g 80 -4.7 -5.0133 | TTCCAGCGGCTGACG CGCCACC GGGC GGAGGTG TTTTTTCGCCGCATC TERM 3287 2492873 - 2492841 - R 71 -9.9 -3.19463 | opp_overlap 2492842 2492850, overlap 2492842 2492850 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATTTATAA TERM 3288 2492842 - 2492872 + r 88 -14.9 -2.94194 | opp_overlap 2492842 2492841 2492850, overlap 2492850 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATTTATA TERM 3289 2492872 - 2492842 - R 80 -13.4 -2.51464 | opp_overlap 2492842 2492850, overlap 2492841 2492850 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATTTATA TERM 3290 2492864 - 2492850 - R 100 -9.2 -5.17576 | opp_overlap 2492850 2492842, overlap 2492842 2492841 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3291 2492850 - 2492864 + r 100 -8.5 -5.24989 | opp_overlap 2492842 2492841 2492850, overlap 2492842 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 3292 2492915 - 2492889 - R 70 -9.4 -3.35798 | opp_overlap 2492889 2492891 2492902, overlap 2492892 ATCTGCGATTTATAA GATTCGAACCTG CCG CAGGTTCGGGTC TTGCCTGATGCGCTG TERM 3293 2492889 - 2492915 + r 85 -13.8 -3.09834 | opp_overlap 2492889 2492892, overlap 2492891 2492902 ATCTGCGATTTATAA GATTCGAACCTG CCG CAGGTTCGGGTC TTGCCTGATGCGCTG TERM 3294 2492891 - 2492913 + r 73 -10.6 -3.10796 | opp_overlap 2492889 2492892, overlap 2492889 2492902 CTGCGATTTATAAGA TTCGAACCTG CCG CAGGTTCGGG TCTTGCCTGATGCGC xapR 2493886 - 2493002 - | DNA-binding transcriptional activator XapR TERM 3295 2493817 - 2493792 - G 75 -11.9 -2.87564 | opp_overlap 2493785, overlap 2493797 GGAGGTTGTGACATA TTTAACCGGGC AGCA GCCCGGCCAAA ATGCAATTCTTCTGC TERM 3296 2493812 - 2493797 - G 76 -11.8 -3.15999 | opp_overlap 2493785, overlap 2493792 TTGTGACATATTTAA CCGGGC AGCA GCCCGG CCAAAATGCAATTCT TERM 3297 2494148 - 2494119 - R 88 -8.6 -4.82901 | overlap 2494121 CCTTGTTCATAAAAA TGGACTGGCGAA CATCCT CTCGCCAGTCAA ATAAAATTAATGTGC TERM 3298 2494146 - 2494121 - R 73 -11.2 -2.6933 | overlap 2494119 TTGTTCATAAAAATG GACTGGCGAA CATCCT CTCGCCAGTC AAATAAAATTAATGT xapB 2495411 - 2494155 - | xanthosine permease TERM 3299 2495451 - 2495437 - R 79 -9.2 -4.03234 | TTGCCGTGAGATAAA GCCCCA ATA CGGGGC CGTAGTCATTGTGTT xapA 2496299 - 2495466 - | purine nucleoside phosphorylase TERM 3300 2496072 - 2496040 - G 74 -4.2 -4.82901 | gap 2, overlap 2496042 2496060 CGCCCTTCATAAAAA TG-TCC-GCGGCCTTT CAT ACAGGCCACCGGAACA CCCGCCAGATGGCCG TERM 3301 2496223 - 2496213 - G 87 -8.2 -4.67048 | GGAGCCTAAAATAAA CGCG ACT CGCG GGGTAAATGCCGGTT yfeN 2496555 - 2497316 + | hypothetical protein TERM 3302 2497346 - 2497321 - T 70 -9.7 -3.06815 | ACCTGTTTTAACACA CTGCCCTGTCA AAAA TGGCAGGGCAA GACCGCACCTCACAC STY2660 2498304 - 2497378 - | putative transcriptional regulator TERM 3303 2498509 - 2498528 + G 79 -2.8 -5.28176 | overlap 2498511 TTGAAGGCATTACGA CAGCGG CTATCGCT CTGCTG TTTTTTATGCATGGC TERM 3304 2498728 - 2498744 + G 71 -7.3 -3.93288 | TTTTGCCCGCCACCG TGCAGTC GGC GATTGCA TTTACTTCACTCGCG TERM 3305 2498784 - 2498814 + G 81 -8.3 -4.34402 | gap 1 GTCGCGGCCGCGGTG TGCTCAGC-GTCTG CGTC CAGCCTGCTGGGCA TTTTCCTGTCGCCGC TERM 3306 2499237 - 2499208 - g 86 -4.1 -5.40072 | opp_overlap 2499210 2499211, overlap 2499209 2499210 GCGGTTCGAAAAAAA GCCTGGCCAACGG GATC CCGATGGCCAATA TTCTGTTTCCGACGT TERM 3307 2499235 - 2499210 - g 71 -11.1 -2.89655 | opp_overlap 2499210 2499211, overlap 2499209 2499208 GGTTCGAAAAAAAGC CTGGCCAACGG GATC CCGATGGCCAA TATTCTGTTTCCGAC TERM 3308 2499211 - 2499234 + G 72 -12.4 -2.69057 | opp_overlap 2499210 2499209 2499208, overlap 2499210 GTTCGAAAAAAAGCC TGGCCAACGG GATC CCGATGGCCA ATATTCTGTTTCCGA yfeH 2498394 - 2499392 + | hypothetical protein ypeB 2499616 - 2499389 - | hypothetical protein ligA 2501624 - 2499609 - | NAD-dependent DNA ligase LigA TERM 3309 2500712 - 2500689 - G 71 -8.1 -3.87551 | gap 1, opp_overlap 2500710 AGCAGGAAATTTAAA CGC-CACCGC CCAGC GCGGCGCGCG GGCCACAAAGCCCAG TERM 3310 2501648 - 2501664 + r 74 -10.8 -3.17901 | opp_overlap 2501648, overlap 2501661 ATCAATGATAAAAAA CCCCCG ACAGG CGGGGG TTACGTTAAAAATGT TERM 3311 2501664 - 2501648 - R 100 -10.8 -5.38249 | opp_overlap 2501648 2501661 ATCAATGATAAAAAA CCCCCG ACAGG CGGGGG TTACGTTAAAAATGT STY2664 2502682 - 2501696 - | cell division protein ZipA TERM 3312 2503402 - 2503426 + G 80 -4.9 -5.06414 | opp_overlap 2503408 TATTCCTGGCATTGG CCAAACCATCG CGC CGGTGCTGTGG TTTTTGTTCAGCGCC cysZ 2502914 - 2503675 + | putative sulfate transport protein CysZ cysK 2504048 - 2505019 + | cysteine synthase A TERM 3313 2505048 - 2505063 + F 87 -6.8 -5.26316 | opp_overlap 2505048 2505039 AAAACGCGTAAAAAA GCACCT TTTT GGGTGC TTTTTTGTGGCCTGC TERM 3314 2505063 - 2505048 - f 83 -6.1 -5.08011 | opp_overlap 2505048, overlap 2505039 AAAACGCGTAAAAAA GCACC TTTTTG GGTGC TTTTTTGTGGCCTGC ptsH 2505403 - 2505660 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3315 2506032 - 2505991 - f 72 -8.1 -3.73402 | gap 1, overlap 2505996 2505999 2506001 2506004 ATAGCCCTGATTAAA GATAAGCACATG-ACGGCTG ACG CAGCCGCACATGAAGTTATC GAAGGTCAGGCCACT TERM 3316 2506024 - 2505999 - f 73 -10.5 -3.00128 | gap 1, overlap 2505996 2505991 2506001 2506004 GATTAAAGATAAGCA CATG-ACGGCTG ACG CAGCCGCACATG AAGTTATCGAAGGTC TERM 3317 2506018 - 2506004 - f 73 -11.4 -2.72879 | overlap 2506001 2505999 2505996 2505991 AAGATAAGCACATGA CGGCTG ACG CAGCCG CACATGAAGTTATCG TERM 3318 2507887 - 2507871 - g 74 -2.2 -5.06414 | opp_overlap 2507882 TTGCTGGAAGAAAAA GCCAAG TCTAC CCTGAC TCCGGTTGTTATCTC crr 2507478 - 2507987 + | glucose-specific PTS system component TERM 3319 2508024 - 2508007 - T 93 -12.7 -3.67597 | opp_overlap 2508007 TGCCGCAGTGAAGAA TGGCGCC TTTG GGCGCCA TTTTTTTTGCCTGTA TERM 3320 2508007 - 2508024 + T 100 -12.7 -5.83822 | opp_overlap 2508007 TGCCGCAGTGAAGAA TGGCGCC TTTG GGCGCCA TTTTTTTTGCCTGTA STY2671 2508376 - 2508137 - | hypothetical protein pdxK 2509239 - 2508373 - | pyridoxal kinase ptsJ 2509322 - 2510614 + | putative transcriptional regulator STY2675 2510629 - 2511348 + | glutamine amidotransferase STY2676 2511407 - 2511784 + | hypothetical protein cysM 2512728 - 2511817 - | cysteine synthase B TERM 3321 2512689 - 2512709 + g 85 -8.9 -4.38273 | GCCGTTGTAATTTGA CCAGCGGCG TAT TGCCGATGG TTTGTTCTAATGTAT TERM 3322 2512775 - 2512748 - R 74 -3.3 -5.08601 | gap 1, overlap 2512749 TCAGCTCAATAAAAA TGCCGGGT-GGC GCTGT GCTTACCCGGCC TACAAAATCACGATA cysA 2513943 - 2512849 - | sulfate/thiosulfate transporter subunit TERM 3323 2513503 - 2513517 + g 100 -11.4 -4.82901 | overlap 2513496 GGCAAGCGCGCGCGC CAGCGC CAC GCGCTG TTTTTGTCCGCCGGA TERM 3324 2513743 - 2513714 - G 70 -3.4 -4.78848 | TGCTGAAACACAAAA CCGACTTTACGC TCACGC GCGTGCAGGCGG CTAACGTCCGTACCG cysW 2514808 - 2513933 - | sulfate/thiosulfate transporter permease subunit cysU 2515641 - 2514808 - | sulfate/thiosulfate transporter subunit cysP 2516657 - 2515641 - | thiosulfate transporter subunit TERM 3325 2516804 - 2516777 - R 95 -12.8 -3.84992 | gap 1, overlap 2516764 2516778 AAGGGAATAAGAGAA TC-CCTCCCCACG CGG CGTGAGGAGGAGA CCGGCATCAATCAGA TERM 3326 2516802 - 2516778 - R 87 -14.3 -2.8991 | overlap 2516764 2516777 AGGGAATAAGAGAAT CCCTCCCCACG CGG CGTGAGGAGGA GACCGGCATCAATCA yfeF 2517606 - 2516815 - | short chain dehydrogenase TERM 3327 2517741 - 2517724 - R 100 -12.7 -5.48825 | opp_overlap 2517720 TATTAGGTAAAAAAA TCCCCGC GGAG GCGGGGA TGGGCATTTTTATGC STY2683 2518742 - 2517843 - | hypothetical protein TERM 3328 2518656 - 2518670 + g 74 -7 -4.29845 | GCTGGCCGCGCGCAG GGCGTC CAG GTCGCC TTTTACATTGGCTTC TERM 3329 2518781 - 2518764 - R 86 -11.3 -3.68359 | opp_overlap 2518764 TCCTGAAAATGAGAA TGCCACG CAGT CGTGGCA TTAATGGAGGTTATT TERM 3330 2518764 - 2518781 + r 77 -11.3 -3.17486 | opp_overlap 2518764 TCCTGAAAATGAGAA TGCCACG CAGT CGTGGCA TTAATGGAGGTTATT STY2684 2519412 - 2518837 - | hypothetical protein TERM 3331 2519252 - 2519280 + g 87 -13.8 -3.19389 | GCCGGCTCTTCCAGC GGCGTGGCGGCG GTCAG CGCTCCCACGCC TTGCTCAGTGACTTC STY2685 2519923 - 2519474 - | hypothetical protein STY2686 2520335 - 2519910 - | putative acetyltransferase TERM 3332 2520966 - 2520986 + G 81 -6.8 -4.70879 | ATGGTTTTACCAATC CGAAAGCG GCGGG CGCTTCCG TTTTTGCGCTTTCCA TERM 3333 2521349 - 2521338 - g 71 -5.8 -4.36914 | CGTTTCGCCAGAAAA TCGC TACG GCGA TCGCCAACGGCATCA amiA 2520548 - 2521417 + | N-acetylmuramoyl-l-alanine amidase I TERM 3334 2521778 - 2521768 - g 71 -4.6 -4.58395 | opp_overlap 2521768 TTTATTGCCGAAAAA CCGG GCG CCGA TCCGGTGTGGTGGTT hemF 2521420 - 2522319 + | coproporphyrinogen III oxidase STY2689 2522340 - 2522669 + | hypothetical protein TERM 3335 2523091 - 2523073 - g 72 -2.4 -4.84359 | TGAGCTTTACAAAAA GCTCTC CGATGAT GAAAGC CGCGACATGGTCGAT STY2690 2522798 - 2524075 + | hypothetical protein TERM 3336 2524141 - 2524154 + T 73 -9.5 -3.30124 | CGCTTCCCCGGAGGC GGCGC TGGC GCGCC TTGTCCGGGCTACCA yfeG 2525327 - 2524275 - | transcriptional regulator EutR eutK 2525869 - 2525375 - | ethanolamine utilization protein EutK eutL 2526541 - 2525882 - | ethanolamine utilization protein EutL eutC 2527447 - 2526551 - | ethanolamine ammonia-lyase small subunit TERM 3337 2526857 - 2526839 - G 73 -8.8 -3.91144 | opp_overlap 2526843 2526844, overlap 2526842 2526843 GCCATAGCGCACAAA GAACGGCG TGC CGACGTTC AGCCCGGCCTGCTTC eutB 2528827 - 2527466 - | ethanolamine ammonia-lyase heavy chain eutA 2530242 - 2528839 - | reactivating factor for ethanolamine ammonia lyase TERM 3338 2529907 - 2529895 - G 76 -9.1 -3.96148 | GCTGGCGACCACAAA GTCGC CCA GCGAC TGCGAGAGCGCCATG eutH 2531465 - 2530239 - | hypothetical protein TERM 3339 2531264 - 2531231 - G 71 -8.1 -3.80174 | gap 1 ATACCGGGATAATAA CCGGCCCCAGTACATG CGC CA-GCACCGGCGCCAG CGCGGTCATACCAAC TERM 3340 2531448 - 2531430 - G 74 -7.5 -4.12857 | opp_overlap 2531430 2531429 2531432 AATCAGCATAAAGAA CATCATG ATGTA CATGATG ATTTCGTTAATTCCC eutG 2532771 - 2531584 - | putative alchohol dehydrogenase TERM 3341 2532675 - 2532704 + g 70 -7.1 -4.11484 | gap 1 CGAGCGCCCCAAGCC CGCACAGCGTGACC GGC GGT-ACGCTGAACG TTTTCACCCGTTGCA eutJ 2533600 - 2532761 - | putative ethanolamine utilization protein EutJ TERM 3342 2533496 - 2533535 + g 76 -12.9 -2.70932 | opp_overlap 2533495 2533494 2533498, overlap 2533498 2533524 GCAGGTGCCCAAATC GACGCCCAGCC-ACAGCGG TGTG TCGCTGGCGGC-GGGCGTC TGGTTACACAGGGCC TERM 3343 2533524 - 2533555 + g 91 -10 -4.66953 | opp_overlap 2533498 2533495 2533494, overlap 2533498 2533496 AGCGGTGTGTCGCTG GCGGCGGGCGTCTG GTTA CACAGGGCCGCCGC TTTTTGCAGTCTTGG eutE 2535014 - 2533611 - | putative aldehyde dehydrogenase TERM 3344 2534712 - 2534733 + g 83 -7.9 -4.60924 | opp_overlap 2534698 2534700 ACACTCGACGCCCGG CGTGCCGCG CGCC TGCGCCACG TTTTTGGCAAATTTA eutN 2535715 - 2535026 - | putative ethanolamine utilization protein EutN eutD 2536772 - 2535756 - | phosphotransacetylase TERM 3345 2535990 - 2536016 + g 73 -5.1 -4.56597 | gap 1, overlap 2535993 AATCATCACGTTGGC GCGGCCTTGCAG CGGG CTGTCAGGC-GC TTTTTGCGCGGCGAC TERM 3346 2536487 - 2536498 + g 81 -3.6 -5.24129 | overlap 2536484 TAAGCTTTTCCACTG CGTC CGGC GGCG TTTTTTCTCCGGCAC STY2703 2537566 - 2536769 - | putative cobalamin adenosyltransferase TERM 3347 2537250 - 2537268 + g 75 -6.6 -4.37886 | overlap 2537224 2537251 CGAAAGCCGAGGCGC GGGTCGCT TTT GGCGACCA TTTTGTCCGCCGTCA STY2704 2538252 - 2537563 - | putative ethanolamine utilization protein EutQ STY2705 2538709 - 2538230 - | putative ethanolamine utilization protein EutP eutS 2539057 - 2538722 - | putative ethanolamine utilization protein EutS TERM 3348 2539459 - 2539435 - R 100 -9.9 -4.77173 | opp_overlap 2539438, overlap 2539437 2539438 GGCGCATAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 3349 2539457 - 2539437 - R 95 -12.5 -3.99938 | opp_overlap 2539438, overlap 2539435 2539438 CGCATAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 3350 2539456 - 2539438 - R 93 -16 -2.98878 | opp_overlap 2539438, overlap 2539437 2539435 GCATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 3351 2539438 - 2539456 + r 100 -16 -4.91109 | opp_overlap 2539437 2539435 2539438 GCATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 2539996 - 2539538 - | transposase for insertion sequence element IS200 TERM 3352 2540109 - 2540127 + r 100 -16 -4.18018 | opp_overlap 2540099 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 3353 2540163 - 2540146 - R 100 -12.7 -5.4251 | overlap 2540157 TCCATAGACAAAAAA GCGCAGG AGAA CCTGCGC CAGAAGAGAGAGTAA maeB 2542465 - 2540186 - | malic enzyme TERM 3354 2540620 - 2540600 - G 83 -10.4 -3.92324 | CGGCTCAATACCAAA GCGGCGAA CGGTT TCCGCCGC CATTACGGCGATCTC talA 2542737 - 2543687 + | transaldolase A tktB 2543707 - 2545707 + | transketolase TERM 3355 2545729 - 2545769 + T 90 -14.2 -3.40371 | opp_overlap 2545723 2545729 2545727 2545725, overlap 2545730 CGTTAGCAACACAGA CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA TTACTTCGTAGACTC TERM 3356 2545769 - 2545729 - T 79 -12 -3.12449 | opp_overlap 2545729 2545730, overlap 2545723 2545727 2545725 CGTTAGCAACACAGA CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA TTACTTCGTAGACTC TERM 3357 2545730 - 2545768 + T 100 -17.7 -2.63901 | opp_overlap 2545723 2545729 2545727 2545725, overlap 2545729 GTTAGCAACACAGAC TTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAA ATTACTTCGTAGACT STY2712 2546000 - 2545770 - | hypothetical protein STY2713 2547171 - 2546128 - | hypothetical protein TERM 3358 2546379 - 2546393 + g 100 -7 -5.47218 | opp_overlap 2546359 GCCGCAAACGTACGG CGCGCG AGA CGAGCG TTTTTTTGCGTGAAA TERM 3359 2547001 - 2546951 - G 85 -12.5 -3.53012 | gap 2, opp_overlap 2546951 2546953 TCGGGCGGCGCCAAA CCGCCGCGGTCGATACGCAGTACCG CAT CGGTAC-GCGCCCCGGC-GCTGCGG CTTAATGTCATCACC TERM 3360 2547277 - 2547288 + r 95 -3 -5.81412 | opp_overlap 2547277 TCTTTTTTGTGTAAA GAAA TATA TTTC TTTTTTTTCAGTCCA yffH 2547871 - 2547296 - | hypothetical protein TERM 3361 2548250 - 2548226 - g 88 -11.5 -4.21922 | opp_overlap 2548224 2548226 GGATTCAAAATCAAA TTGATGCCGGA TAT CCCAGCATCAA TCTTCTGGTGATAAA STY2716 2548075 - 2549373 + | hypothetical protein aegA 2551681 - 2549822 - | putative oxidoreductase TERM 3362 2550110 - 2550081 - G 71 -12.1 -2.52516 | overlap 2550080 GCCGGCATCACGAAC TCGCTGTCCGGTA CAGG TACCGGACGGCGT CGCCCCTGACCATCC TERM 3363 2550162 - 2550152 - G 71 -4.6 -4.65895 | overlap 2550160 CCGCGTACGCAAAAA GCGA ATA CCGC TGGCGCGCCCGTGCG TERM 3364 2550221 - 2550239 + g 74 -4.5 -4.69464 | GTTAAATTCAAAGTT CGCGC CCTCTTCCC GCGCG TTTTTCACCTCTTTT TERM 3365 2551885 - 2551907 + G 100 -6.2 -5.48787 | opp_overlap 2551880 2551879 ACGGTTAAACGCCCG GTCTCGGCCA GTC TGGCTAAGGC TTTTTTCTATATTGT TERM 3366 2552949 - 2552920 - g 75 -5.7 -4.60889 | overlap 2552922 AATCAGGCGCAAAAA CACTTCCAGCAAC TTTT GTTAATGGAAGAG CGCGCGACGATTGCC TERM 3367 2553368 - 2553335 - g 76 -10.9 -3.66874 | opp_overlap 2553326 CCAACGCGAGCGAAA TCGCCGTGAGCTGCG TCAC CGCGCCTGACGGCGA TCATACCGTTTATAT narQ 2551867 - 2553567 + | nitrate/nitrite sensor protein NarQ TERM 3368 2553612 - 2553579 - f 72 -8.7 -3.74238 | opp_overlap 2553589, overlap 2553572 2553580 2553582 GTAAAGAACGGCAAA TCACCGGAAGGCCAG ATGT CAGGCTTTCCGGCGT TGGCACAAAAAGTAT TERM 3369 2553611 - 2553580 - f 79 -12.2 -2.8382 | opp_overlap 2553589, overlap 2553579 2553572 2553582 TAAAGAACGGCAAAT CACCGGAAGGCCAG ATGT CAGGCTTTCCGGCG TTGGCACAAAAAGTA TERM 3370 2553609 - 2553582 - f 75 -11.2 -2.95527 | opp_overlap 2553589, overlap 2553580 2553579 2553572 AAGAACGGCAAATCA CCGGAAGGCCAG ATGT CAGGCTTTCCGG CGTTGGCACAAAAAG TERM 3371 2555572 - 2555560 - g 75 -4.1 -4.9218 | CACCCATGAGAAAAA CAACA TTA TGTCG GTCTTCTCGACGGTC acrD 2553752 - 2556865 + | aminoglycoside/multidrug efflux system TERM 3372 2556901 - 2556931 + F 70 -9.1 -3.34962 | opp_overlap 2556906, overlap 2556906 GAGGTGTCGGGCACA AAAAAGGCGACTT TCGTT GAGTCGCCTTTTC TTATCCCCTATGGGA TERM 3373 2556906 - 2556926 + F 93 -9 -4.78237 | opp_overlap 2556906, overlap 2556901 GTCGGGCACAAAAAA GGCGACTT TCGTT GAGTCGCC TTTTCTTATCCCCTA TERM 3374 2556926 - 2556906 - f 100 -8.3 -5.24129 | opp_overlap 2556901 2556906 GTCGGGCACAAAAAA GGCGACT TTCGTTG AGTCGCC TTTTCTTATCCCCTA TERM 3375 2556953 - 2556965 + F 79 -7.7 -4.41348 | CCTATGGGAGCGCGG TGCCT TCC AGGCA TTTATTTACGAAGCA yffB 2557647 - 2558003 + | hypothetical protein TERM 3376 2558139 - 2558155 + G 73 -5.1 -4.59773 | ATTGAGCATATGGAT TTTGGCG ACA CGCAAAA TTTTTGGGCATGGCG TERM 3377 2558977 - 2558989 + G 85 -9.1 -4.38154 | overlap 2558963 TGACGACGGGCGGTA CGTCC GAC GGACG TTTTATCGCCCGTAT dapE 2558007 - 2559134 + | succinyl-diaminopimelate desuccinylase STY2722 2559162 - 2559362 + | hypothetical protein TERM 3378 2559400 - 2559371 - T 93 -14.4 -3.3858 | overlap 2559363 AAAGTAACCGGATAA CATGCCGGACAG GTATCG CTATCCGGCATG GTCCCCACCGCCTGG STY2723 2561404 - 2559389 - | hypothetical protein TERM 3379 2561244 - 2561196 - G 81 -14.6 -2.68775 | gap 2, overlap 2561160 2561193 2561192 GCATGACGAAATTCA CGGCCCAGCAGCGTTTGTAACGCC TGT GGCG-TACAG-CGCGGCTGGGCGG GCGCGTCAGGCGCGA STY2724 2562283 - 2561420 - | hypothetical protein purC 2563128 - 2562415 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3380 2563295 - 2563276 - R 100 -11.4 -5.31275 | opp_overlap 2563276 2563274 TCTTATCAGAAAAAA GGGCCGGA TTGC TCCAGCCC TGTTAAATTACTTGT nlpB 2564337 - 2563303 - | lipoprotein dapA 2565232 - 2564354 - | dihydrodipicolinate synthase gcvR 2565378 - 2565950 + | glycine cleavage system transcriptional repressor bcp 2565950 - 2566420 + | thioredoxin-dependent thiol peroxidase STY2730 2567606 - 2566467 - | hypothetical protein TERM 3381 2566864 - 2566838 - G 74 -7.2 -4.20696 | gap 1, opp_overlap 2566860 TGAGCAACCCTAAAA GCGCGGC-GCC CATTCC GCCTGCCGCGC CCGCGCCGGGAGCGT TERM 3382 2566860 - 2566878 + g 74 -11.6 -3.16683 | opp_overlap 2566838, overlap 2566871 GCCCATTCCGCCTGC CGCGCCCG CGC CGGGAGCG TTAATCACCTCACGT STY2731 2568880 - 2567612 - | putative permease TERM 3383 2567762 - 2567750 - G 71 -4.7 -4.56597 | overlap 2567751 CGTCGCGTGGAAAAA GCTGC CAT GCGGC AGATGGTCCAGCACC TERM 3384 2567925 - 2567905 - G 75 -12.5 -2.64616 | TCGCCATTGACATCA TGGCGCCAG ACA CGGGCGCCA GCAGCCAGGACGGCA TERM 3385 2568213 - 2568187 - G 93 -11.6 -4.40993 | overlap 2568189 GAGAAAGCAGGAAAA TAGCGACCAGCG GCG CGCTAATCGCCA CCAGAAAACCGGGCC TERM 3386 2568211 - 2568189 - G 86 -12 -3.79533 | overlap 2568187 GAAAGCAGGAAAATA GCGACCAGCG GCG CGCTAATCGC CACCAGAAAACCGGG TERM 3387 2569854 - 2569808 - R 71 -10.2 -2.73364 | gap 1 CCGCCATTTTAACCA GCTCGGCA-TACGCGCGAACC TCCTCC GGTTCGCCGGTAATGCCGACC ACGCCGATAAGCTGT TERM 3388 2570303 - 2570284 - R 100 -9.3 -5.18726 | TTCCGACAATAAAAA TGCCGCA ACACGG TGCGGCA TTAAAAAAAAGAGCG STY2734 2571479 - 2570412 - | hypothetical protein TERM 3389 2572029 - 2572044 + G 71 -4.6 -4.65895 | TTTGGCGGCAATGTG GTGCTG CACT CGGCGC TTTTTCGCTACGCGG TERM 3390 2572158 - 2572148 - g 83 -8.2 -4.43681 | opp_overlap 2572149, overlap 2572149 GATGGAAGATCAAAA GCGC AGC GCGC CGCTTACCTGGGTGG STY2735 2571687 - 2573150 + | hypothetical protein STY2736 2573190 - 2573549 + | putative arsenate reductase (arsenical pump modifier) TERM 3391 2573573 - 2573558 - T 86 -11.8 -3.60792 | opp_overlap 2573550 2573558 CGGTTAACCGTTAAA CGCCGC CGTC GCGGCG TATTACAGTTTCAGG TERM 3392 2573558 - 2573573 + T 79 -11.8 -3.12668 | opp_overlap 2573558, overlap 2573550 CGGTTAACCGTTAAA CGCCGC CGTC GCGGCG TATTACAGTTTCAGG STY2737 2574301 - 2573576 - | DNA replication initiation factor TERM 3393 2574364 - 2574344 - R 100 -18.3 -3.58726 | opp_overlap 2574361 TCCCGTGAGATAGAA CCGGGCAGC ATC GCTGCCCGG CAACCCGTTACTGAT TERM 3394 2574376 - 2574396 + r 100 -14.1 -3.65902 | CCGGCAACCCGTTAC TGATGCGGA GAC TCCGCATCA TTTGCCTCCAGTACC uraA 2575661 - 2574372 - | uracil transporter TERM 3395 2575321 - 2575331 + g 74 -2.4 -5.03314 | ATCACATCCAGCCAG CCGG TGC CCGC TTTTTTAACGATGAA TERM 3396 2575394 - 2575384 - G 72 -2.4 -4.84311 | CCGCACATAATAAAA CCGC CCA GCGC CACTTCATAACCCAG TERM 3397 2575707 - 2575735 + r 74 -10.4 -3.13412 | opp_overlap 2575712, overlap 2575712 GTGGTTTTATTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTTA ATTATTTATTCACTT TERM 3398 2575730 - 2575712 - R 100 -11 -5.81412 | opp_overlap 2575707 2575712 TTTATTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTTAATTATTTATT TERM 3399 2575712 - 2575730 + r 93 -10.3 -4.65969 | opp_overlap 2575712, overlap 2575707 TTTATTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTTAATTATTTATT upp 2576375 - 2575749 - | uracil phosphoribosyltransferase TERM 3400 2576700 - 2576680 - H 76 -4.6 -5.07053 | gap 1, overlap 2576681 2576695 AACCATGCCAAAAAA TCGCCC-GG ATAA CCAGGGCGC AGACCACGCTCGCAA TERM 3401 2576785 - 2576772 - H 79 -2.3 -5.46657 | TACCGCAAGAAAAAA CGTGG GGAA CCAGG CAGTGACCGATAAGA purM 2576788 - 2577825 + | phosphoribosylaminoimidazole synthetase TERM 3402 2577951 - 2577935 - g 70 -9.4 -3.73914 | overlap 2577936 AGTATTCAGCAATAA GGCCGA CGCGT TCGGCC TTGAACGCGCCAGAG TERM 3403 2577982 - 2577969 - g 71 -9.5 -3.494 | opp_overlap 2577970 GAACGCGCCAGAGAA GCCGG CATT CCGGC GCAAGCGCTGACTGC purN 2577825 - 2578463 + | phosphoribosylglycinamide formyltransferase TERM 3404 2580052 - 2580042 - g 78 -2.4 -5.27477 | ACTTCAACGAAAAAA CGGC GCG GCTG TATACCGATTATTCG ppk 2578652 - 2580718 + | polyphosphate kinase TERM 3405 2580875 - 2580849 - g 83 -10.1 -4.07687 | ATCGGGCGCTTAAAA CAGCGCGTCCA TCTGG CGGACGGGCTG GGCGCAGATAACAAA TERM 3406 2581219 - 2581250 + G 81 -12.4 -3.53343 | gap 1, overlap 2581223 2581225 TGGTTGAAAGCCGTC GTATGGGCTGCGTGA GCT TCGCGCAGCTC-TAC TTTCCCGGCGGCGTT TERM 3407 2581223 - 2581247 + G 86 -14.3 -2.90496 | overlap 2581219 2581225 TGAAAGCCGTCGTAT GGGCTGCGTGA GCT TCGCGCAGCTC TACTTTCCCGGCGGC TERM 3408 2581225 - 2581245 + G 81 -13.3 -3.00525 | overlap 2581223 2581219 AAAGCCGTCGTATGG GCTGCGTGA GCT TCGCGCAGC TCTACTTTCCCGGCG ppx 2580723 - 2582264 + | exopolyphosphatase TERM 3409 2582272 - 2582298 + T 93 -12.2 -3.78022 | opp_overlap 2582266 2582278, overlap 2582273 2582276 CCGCGTAAATTGTGG ATCAGACGCCGC GCT GCGGCGTCTGCC TTTACTGAATCTCAG TERM 3410 2582273 - 2582297 + T 93 -15.7 -2.86492 | opp_overlap 2582266 2582278, overlap 2582272 2582276 CGCGTAAATTGTGGA TCAGACGCCGC GCT GCGGCGTCTGC CTTTACTGAATCTCA TERM 3411 2582276 - 2582294 + T 90 -16 -2.68279 | opp_overlap 2582266 2582278, overlap 2582273 2582272 GTAAATTGTGGATCA GACGCCGC GCT GCGGCGTC TGCCTTTACTGAATC TERM 3412 2582292 - 2582278 - T 79 -12.8 -2.79312 | opp_overlap 2582276 2582273 2582272, overlap 2582266 AAATTGTGGATCAGA CGCCGC GCT GCGGCG TCTGCCTTTACTGAA STY2744 2584513 - 2582300 - | hypothetical protein STY2745 2584747 - 2584610 - | hypothetical protein TERM 3413 2584663 - 2584636 - G 72 -2.1 -4.96388 | opp_overlap 2584631, overlap 2584631 AATTATTAAACAAAA GTAACATTTGA TTTAAG TCAATTATTAC CTTTCTCCTGCAGCC STY2746 2585078 - 2584818 - | hypothetical protein TERM 3414 2585249 - 2585223 - H 72 -3.1 -4.92314 | opp_overlap 2585223 ATGAACCGATAAAAA CAAAGCATC GTATCATCT AATGCTTTG TTTTTTAGTCTAAAA TERM 3415 2585223 - 2585249 + H 75 -3 -5.21709 | opp_overlap 2585223 ATGAACCGATAAAAA CAAAGCATCGTA TCA TCTAATGCTTTG TTTTTTAGTCTAAAA TERM 3416 2586246 - 2586233 - g 100 -8.1 -5.38958 | ATTCAGAAACAAAAA CTGGC GCTG GCCAG GGAAGAGGCCCGGGT STY2748 2585891 - 2586430 + | hypothetical protein STY2749 2586659 - 2587348 + | hypothetical protein STY2750 2587583 - 2587425 - | hypothetical protein TERM 3417 2587590 - 2587579 - G 71 -4.4 -4.62984 | GCACTACACAGAAAA TGCA TCTA TGCA CATAAATAAAAACCC TERM 3418 2587622 - 2587603 - R 100 -10 -5.42975 | opp_overlap 2587603 GCACATAAATAAAAA CCCTCTGC AAAA ACAGAGGG TTAAATTCACTTTTA guaA 2589248 - 2587671 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3419 2589311 - 2589288 - R 100 -13.9 -4.56113 | AACAGATTAAATAAA TCGCCCGAC GCGAAG GTCGGGCGA AGAAAATCAGGAGCC guaB 2590790 - 2589318 - | inositol-5-monophosphate dehydrogenase TERM 3420 2589784 - 2589760 - G 71 -8.5 -3.85817 | opp_overlap 2589782, overlap 2589782 ATGTCGCCGGAGAAA CGGATACCGCC GTC AGCGATAACCG GAATCCCGGTGCCTT TERM 3421 2591635 - 2591681 + G 71 -5.8 -4.37092 | gap 1, opp_overlap 2591663 2591664, overlap 2591636 TTTGCCAGCCGTATT CCGGTGGTCAGCGCCGTCGGT CACGAA ACCGACGTCACT-ATCGCCGA TTTTGTCGCCGACCT TERM 3422 2592136 - 2592166 + G 81 -11.9 -3.53012 | gap 1 CTGGAAGCGGTCAGC CCGT-TAGCCACGC TGGC GCGCGGCTATACGG TTTCGACGACAACGG xseA 2590945 - 2592294 + | exodeoxyribonuclease VII large subunit TERM 3423 2592444 - 2592422 - T 100 -14.1 -4.08216 | opp_overlap 2592422 TCATTCGCCTCAAAA CCGGGCAGG GAATA CCCGCCCGG TTTTGTCTAACTTAC TERM 3424 2592422 - 2592444 + T 100 -12.7 -4.57474 | gap 1, opp_overlap 2592422 TCATTCGCCTCAAAA CCGGGCAGGG AATA CCC-GCCCGG TTTTGTCTAACTTAC TERM 3425 2596424 - 2596442 + T 72 -6.6 -4.26076 | opp_overlap 2596424, overlap 2596389 GTGGCGCCGTTAATA TCCACGCT GGA GGCGAGGA TTTTAATACCGATGC ratC 2599525 - 2597945 - | hypothetical protein TERM 3426 2598391 - 2598379 - G 74 -3.4 -4.94902 | TAAGTACCATAAAAA TCAC ATCCA GTGA GGCGTGAAGAGCCGT TERM 3427 2599129 - 2599179 + g 100 -16.1 -3.56643 | gap 1, overlap 2599128 2599127 TATTCGACGTCATCT CCGCAGCCAGCAGCG-GGCGGTGG AATT TCACCCCCGCGCTGTTGGCCGCCG TTTCCGGCATATGGC TERM 3428 2599550 - 2599575 + r 75 -6.1 -4.47485 | gap 1, overlap 2599551 2599552 2599571 2599572 CGGCGTGCCGGCGCC GTCCG-TGACGG TCA CCGTCAGCGGGA TTTTATCCCCTTTTT TERM 3429 2599551 - 2599574 + r 71 -9.6 -3.26864 | gap 1, overlap 2599550 2599552 2599571 2599572 GGCGTGCCGGCGCCG TCCG-TGACGG TCA CCGTCAGCGGG ATTTTATCCCCTTTT TERM 3430 2599552 - 2599573 + r 73 -10.9 -2.55034 | gap 1, overlap 2599551 2599550 2599571 2599572 GCGTGCCGGCGCCGT CCG-TGACGG TCA CCGTCAGCGG GATTTTATCCCCTTT TERM 3431 2599571 - 2599585 + r 76 -4.2 -5.00616 | overlap 2599552 2599551 2599550 2599572 GACGGTCACCGTCAG CGGGAT TTT ATCCCC TTTTTTCGCCAGCGC TERM 3432 2599590 - 2599606 + r 74 -5.8 -4.62872 | overlap 2599592 ATTTTATCCCCTTTT TTCGCC AGCGC GGCGGA TTTTTCGGCATTCAT TERM 3433 2600020 - 2599996 - R 79 -9.2 -4.15044 | gap 1, opp_overlap 2599983 CCGTCGTTGAAGAAA GCTCGGCGCGC AGCA GCG-GCCGCGC AAACTCAACGCCCTT TERM 3434 2601062 - 2601075 + r 83 -9.5 -4.07568 | overlap 2601070 GTTGTGCTCTATCAC CGCCG TCAG CGGCG TTTTAAAGCCCGCGC TERM 3435 2602050 - 2602081 + r 95 -12.2 -4.15854 | opp_overlap 2601996 2602049 2602050 CGGCTGAGCACGAAC GGCGCTTGCGGCAG CGGA TTGCCGCTGGCGTC TTTTACCGTCACTTT TERM 3436 2603578 - 2603528 - R 76 -8.1 -4.18494 | CAGCGCCAGCGAAAA CTGGCCGTTGGCGTCGGTGAC GCCGTGATA GTGACCGTCGCCGCCGTCCAG ATTGGCGATAACTAC TERM 3437 2604290 - 2604258 - R 74 -5.4 -4.57569 | overlap 2604259 TGAGGGTGGTAAAAA TCACATCCGCGCTG GCTTT CAGCGCAGGCGCGT TCGACGGGTGCGCCA TERM 3438 2604289 - 2604259 - R 70 -8.9 -3.3422 | overlap 2604258 GAGGGTGGTAAAAAT CACATCCGCGCTG GCTTT CAGCGCAGGCGCG TTCGACGGGTGCGCC TERM 3439 2605048 - 2605078 + r 79 -11.8 -3.14463 | opp_overlap 2605042 CTGATAAACCGGGAT CGTCACGCCGTC AGCCAGC GGCGGCGTGCCG TTAATGGCGGCAGTT ratA 2611716 - 2605324 - | hypothetical protein TERM 3440 2605597 - 2605612 + g 83 -7.6 -4.54026 | opp_overlap 2605580 2605596 2605597 GGCTTTCGTATAAAC CGAAAC CCAG GTTTCG TTATTTTCTTTCCGG TERM 3441 2605637 - 2605650 + g 80 -9.5 -4.00042 | TTCCGGCTATCCGTC GCGCC AGCA GGCGC TTCTTTCATCAACAA TERM 3442 2605806 - 2605826 + g 73 -5.3 -4.56597 | overlap 2605807 GCGTGACATCCCCCG TCGCGCTGG CCG TCAGCTCGG TTTTTAGCCCCACAC TERM 3443 2606834 - 2606861 + g 74 -7.6 -4.11394 | gap 1, overlap 2606835 2606837 2606850 GTATACACGCTCCCC GCACGCGTCAGCG CAT CGCCG-CGCGTGA TTTTCACCGTCGCGT TERM 3444 2606835 - 2606860 + g 72 -11.1 -3.06515 | gap 1, overlap 2606834 2606837 2606850 TATACACGCTCCCCG CACGCGTCAGCG CAT CGCCG-CGCGTG ATTTTCACCGTCGCG TERM 3445 2607748 - 2607766 + g 81 -3.8 -5.15969 | GGTGGTGGTGATCAC CAGCGG AATCGAG TCGCTG TTTTTTGCCTTCACC TERM 3446 2607951 - 2607973 + g 76 -9.8 -3.87815 | AGTCATAGGGTGGCG CGCCGGGG GTGATTG TCCCGGCG TTTGTGCCGCTCCAG TERM 3447 2608007 - 2608019 + g 77 -4.7 -4.88067 | overlap 2608003 2608016 GAACGGATGATCGGC CAGCC CTG GGCGG TTTTTATCGCTCCGT TERM 3448 2608589 - 2608573 - G 71 -7.2 -3.96148 | opp_overlap 2608573 2608572 2608582 GCGGGTGAGCACAAA CGGCGC TTCCG GCACCG GTTTGCCGCTGGCGT TERM 3449 2608629 - 2608639 + g 74 -4.6 -4.81249 | TCACCTTCAACTGTA GGGT ATC GCCC TTTTTCACTTTCAGC TERM 3450 2610368 - 2610348 - G 74 -11.1 -3.16475 | opp_overlap 2610352 2610360 TATCCACACAGCTAA CCAGCAGCG TAT CGCTGTTGG GCGCTCTGACGACCG TERM 3451 2611561 - 2611545 - G 70 -9.3 -3.67558 | opp_overlap 2611554, overlap 2611536 2611546 GATACACGGGAATAA TCGCGCC GTC GGCGCGG GGCACGGTGCCGTTA TERM 3452 2611560 - 2611546 - G 76 -12.8 -2.80053 | opp_overlap 2611554, overlap 2611536 2611545 ATACACGGGAATAAT CGCGCC GTC GGCGCG GGGCACGGTGCCGTT TERM 3453 2611791 - 2611757 - R 100 -15.9 -3.17075 | TCTGTCGTAATTCAA CCCACTTTGCTTAGC GCGCG GCTAAGCAAAGTGCG CGGAAAATACCACTC TERM 3454 2611799 - 2611822 + r 93 -15.4 -3.02043 | opp_overlap 2611799, overlap 2611801 AAAGTGCGCGGAAAA TACCACTCCC CGCG GGGAGTGGTA TGTTGAGGACAACTT TERM 3455 2611822 - 2611799 - R 100 -15.4 -4.0896 | opp_overlap 2611799 2611801 AAAGTGCGCGGAAAA TACCACTCCC CGCG GGGAGTGGTA TGTTGAGGACAACTT TERM 3456 2611801 - 2611820 + r 85 -13.6 -3.06696 | opp_overlap 2611799, overlap 2611799 AGTGCGCGGAAAATA CCACTCCC CGCG GGGAGTGG TATGTTGAGGACAAC sinI 2612801 - 2611836 - | hypothetical protein TERM 3457 2614101 - 2614114 + r 73 -9.5 -3.34088 | TTCCGGATCGAGTTG CGCCG CCAG CGGCG TTCCTATCTGGTAGT TERM 3458 2614880 - 2614896 + r 81 -8.1 -4.50841 | overlap 2614874 CAGCGCCCTGTTCTT TAAAGGA CTT TCCTTTA TTTTCCTGTTCTTCT TERM 3459 2615047 - 2615033 - R 72 -8.6 -3.71148 | ATAGCAAAACCAGAA TGCGAA TCC TTCGCA CCATATGATATCCCT STY2763a 2615618 - 2615397 - | hypothetical protein TERM 3460 2615633 - 2615645 + r 70 -4.7 -4.4078 | TAACATTCTCCTCAG GCGCG TGA CTCGC TTTTACTTGAAAGGC TERM 3461 2615685 - 2615658 - R 100 -15 -3.59979 | gap 1, opp_overlap 2615653 CGCTTTTACTTGAAA GGCCTGAT-AGCG CTG CGCTTATCAGGCC TGGAATATTACTGAA engA 2617179 - 2615707 - | GTP-binding protein EngA TERM 3462 2617276 - 2617246 - R 74 -11.2 -2.93708 | opp_overlap 2617251, overlap 2617251 CGTTGTTAAAAACAG GAAAACGGCCCCTA CAC CAGGAGCCGTTTTT TCAAACGCACAACCG TERM 3463 2617271 - 2617251 - R 95 -11.1 -4.60746 | opp_overlap 2617251, overlap 2617246 TTAAAAACAGGAAAA CGGCCCCTA CAC CAGGAGCCG TTTTTTCAAACGCAC TERM 3464 2617251 - 2617271 + r 91 -8.2 -5.00616 | opp_overlap 2617251 2617246 TTAAAAACAGGAAAA CGGCCCCT ACACC AGGAGCCG TTTTTTCAAACGCAC STY2765 2618476 - 2617298 - | outer membrane protein assembly complex subunit YfgL STY2766 2619107 - 2618487 - | hypothetical protein TERM 3465 2618568 - 2618582 + g 79 -2.7 -5.25803 | overlap 2618568 2618569 GACGCCCGCTTCCCA TGCGC TGCGC GCGCC TTTTTTATCACCCTT TERM 3466 2619182 - 2619134 - R 76 -8.1 -4.1822 | gap 1, opp_overlap 2619163 2619174 CCTTAGCCCAATAAA GTGCGCAAATGCGCGGCGACGC TGTCCT GCGCCACTGC-CGTTTGCTCAC CGGAGCGCAAATCCT hisS 2620395 - 2619121 - | histidyl-tRNA synthetase TERM 3467 2620287 - 2620303 + g 70 -3 -4.71061 | gap 1 GGATTTCACTGTAAC CGTAGCT GCCG AGC-ACG TTTTTGAGTGTGCCT TERM 3468 2620359 - 2620384 + g 84 -6.1 -5.03747 | opp_overlap 2620359 CGCCAGGCAGATAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3469 2620468 - 2620422 - R 80 -5.8 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAGCGCTTCCCCG AACGAA CCGGG-AGCCATGCGGGTTCA ATCATACACGGGAAG TERM 3470 2620497 - 2620477 - R 82 -13.3 -3.00298 | opp_overlap 2620471 GGGTTCAATCATACA CGGGAAGCG CGC CGCTTCCCA TCACGTTCTTATTTT ispG 2621624 - 2620506 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 3471 2620736 - 2620714 - G 71 -9.8 -3.54475 | CCGTTCACCACACAA CCGATGATCG AGA CGTCCATCGG GGTGATGATATCTTC yfgA 2622625 - 2621651 - | hypothetical protein TERM 3472 2622529 - 2622517 - G 70 -9.1 -3.66095 | AAACCTTCAGGCAAA GTCGC TCA GCGAC AGCCTGCTGGCTGAG yfgB 2624085 - 2622919 - | hypothetical protein TERM 3473 2624175 - 2624143 - R 76 -4.1 -5.04249 | gap 2, overlap 2624145 GGTTGAAAAAAGAAA CGCCCC-GG-TAAGC TTACT GCTCGTCCGGGGGCG CTGCATTGTACAAAT ndk 2624723 - 2624292 - | nucleoside diphosphate kinase STY2772 2625707 - 2624844 - | putative polyferredoxin TERM 3474 2625683 - 2625648 - G 85 -9.1 -4.43037 | gap 2 GGAAGAAAAACGAAA GCGAC-GACG-GACGCA GGCC TGCGTCACGTCTACCGC CGGATCGATCGTCAG STY2773 2626516 - 2625707 - | putative anaerobic reductase component TERM 3475 2626398 - 2626376 - G 76 -9.1 -3.9712 | gap 1 GCAGGCCAGTACAAA CGCC-CCCGC CATC GCGGGAAGCG CGCCGCGCGCAGGTA STY2774 2627138 - 2626509 - | putative anaerobic reductase component TERM 3476 2629023 - 2629000 - R 100 -13.8 -4.08767 | TTTATCGCCGGAAAA GGTGCCGCCG GAAA CGGCGGTACC AACATGAACATAGCG TERM 3477 2629483 - 2629496 + r 81 -3.8 -5.36364 | overlap 2629464 AATAGCGGGCTGTTC GCCA TTTCCC TGGC TTTTTATATTTTTCA pbpC 2631983 - 2629668 - | penicillin-binding protein 1C TERM 3478 2629778 - 2629763 - G 78 -6.1 -4.70887 | TGAGTAATAAAGAAA GGCGA TTATTT TCGCC ATTAACAGGTTCGCC TERM 3479 2629831 - 2629803 - G 87 -8.1 -4.65895 | TTCGCCATTTAAAAA CCACCAGCGAC GCCCTTT GCCGCCGGTAG TCGAGACGGGCAGCG TERM 3480 2631240 - 2631212 - G 73 -5.1 -4.57569 | TCATTCGGGCAAAAA GCGGCGCCAGTTG CGG CATTTGACGCGGC GCCAGCCAGACCGGC TERM 3481 2631941 - 2631929 - G 100 -6.2 -5.50723 | opp_overlap 2631933, overlap 2631930 2631931 CCAGGAAAATAAAAA GCGG CGCGC CCGC CAGCCACAGCCAGCG STY2778 2636918 - 2631984 - | putative lipoprotein TERM 3482 2632259 - 2632269 + g 70 -6.8 -4.11216 | overlap 2632239 2632238 TGGCGCTGCTGTCAG CCAG ATT CTGG TTTTCCAGCTCCAGC TERM 3483 2632966 - 2632979 + g 80 -9.5 -3.96148 | CAGATTTCGCGCAGC GCGCC GAGC GGCGC TTTCTGCTGACGCGC TERM 3484 2633276 - 2633288 + g 74 -4.7 -4.76041 | AGATGCCGATATCCA CCGCG GCG CGCCG TTTTTCATCGCTATC TERM 3485 2634952 - 2634962 + g 78 -2.4 -5.252 | opp_overlap 2634952 AGCCGCACCTGTAAA CCGG ACA CCGC TTTTTTCTCGCCCTG TERM 3486 2635446 - 2635456 + g 80 -4.6 -5.02074 | overlap 2635439 CACCTCATCCGCAGG CGCC AGC GGTG TTTTTTGCGCCGTCA TERM 3487 2636762 - 2636772 + g 75 -6.8 -4.45083 | overlap 2636754 CTTTGCCCTGGCTTT GCTG CGC CAGC TTTTGTAGCTGTGAC TERM 3488 2637250 - 2637279 + G 100 -8.5 -5.27779 | opp_overlap 2637232 2637252, overlap 2637239 2637252 2637253 GATATGGCGGGCGAA TATCGCGCCGG ACATATTC CCGGCGCGCTG TTTTTTGATATTGAA TERM 3489 2637252 - 2637277 + G 84 -8.9 -4.26398 | opp_overlap 2637232 2637252, overlap 2637239 2637250 2637253 TATGGCGGGCGAATA TCGCGCCGG ACATATTC CCGGCGCGC TGTTTTTTGATATTG TERM 3490 2637253 - 2637276 + G 76 -12.4 -3.14212 | opp_overlap 2637232 2637252, overlap 2637239 2637252 2637250 ATGGCGGGCGAATAT CGCGCCGG ACATATTC CCGGCGCG CTGTTTTTTGATATT TERM 3491 2637647 - 2637662 + G 77 -8.2 -4.11216 | opp_overlap 2637630 2637639 CGCAAATCGTCGACG CGCGTC CGGC GGCGCG TTTTAACGCTCAGGC sseA 2637127 - 2637969 + | 3-mercaptopyruvate sulfurtransferase STY2780 2638216 - 2638884 + | hypothetical protein TERM 3492 2639012 - 2638972 - T 90 -15 -2.72227 | gap 1, opp_overlap 2638985, overlap 2638985 AATACTGTTTAAGCA GGCCACAAAAAAACCGCTC AGTT GAGCGGTTTTTTTGTG-CT GGTCCGGTTCGCGGC TERM 3493 2638985 - 2639000 + T 100 -10.4 -5.67967 | opp_overlap 2638972 2638985 CAGGCCACAAAAAAA CCGCTC AGTT GAGCGG TTTTTTTGTGCTGGT TERM 3494 2639000 - 2638985 - T 100 -10.4 -5.626 | opp_overlap 2638985, overlap 2638972 CAGGCCACAAAAAAA CCGCTC AGTT GAGCGG TTTTTTTGTGCTGGT TERM 3495 2639211 - 2639250 + T 76 -12.1 -2.57211 | overlap 2639210 2639238 AGAGGATGTTCCATG GCCGTAAGCGCAGGCAC ACCACA GTGCCTGCTATCACGGC ATTATCGCCAGCGGT TERM 3496 2639238 - 2639280 + T 78 -12.1 -3.01712 | gap 1, overlap 2639211 2639210 2639259 2639263 GGCACACCACAGTGC CTGCTATCACGGCATTATCG CCAG CGGTGCTGCCGTGAT-GCGG TCTTCGCAAGGACCG TERM 3497 2639446 - 2639421 - T 70 -10.3 -2.55722 | opp_overlap 2639421 2639425 AGAGCAGGTAAGCCA GGAGGCCGCCC TGTT GGGCGGCTTTC TTTTCTTCAGATGAT TERM 3498 2639421 - 2639446 + T 100 -14.7 -4.66318 | opp_overlap 2639421, overlap 2639425 AGAGCAGGTAAGCCA GGAGGCCGCCC TGTT GGGCGGCTTTC TTTTCTTCAGATGAT TERM 3499 2639425 - 2639442 + T 100 -14.1 -4.87892 | opp_overlap 2639421, overlap 2639421 CAGGTAAGCCAGGAG GCCGCCC TGTT GGGCGGC TTTCTTTTCTTCAGA sseB 2640238 - 2639453 - | enhanced serine sensitivity protein SseB TERM 3500 2640031 - 2640052 + g 75 -5.9 -4.60487 | gap 1, opp_overlap 2640034, overlap 2640030 2640035 GAGAAGTAAAGAAGG GAATGACGGT CGT GCCGTC-TTC TTTTTCCCAGTGCTG TERM 3501 2640035 - 2640049 + g 79 -7.8 -4.41633 | opp_overlap 2640034, overlap 2640030 2640031 AGTAAAGAAGGGAAT GACGGT CGT GCCGTC TTCTTTTTCCCAGTG TERM 3502 2640282 - 2640270 - R 70 -9.1 -3.30124 | opp_overlap 2640281 TTGTAGGCCTGATAA GACGC ACG GCGTC GCCATCAGGCAAAAT TERM 3503 2640281 - 2640309 + r 77 -10.9 -3.17075 | opp_overlap 2640270 2640297 2640298 ATAAGACGCACGGCG TCGCCATCAGGCA AAA TGCCGGGTGGCGC TTCGCTTACCCGGCC TERM 3504 2640324 - 2640297 - R 76 -7.6 -4.21194 | gap 1, opp_overlap 2640281, overlap 2640298 CGCCATCAGGCAAAA TGCCGGGT-GGCG CTT CGCTTACCCGGCC TACAAAAACACCGTT TERM 3505 2640323 - 2640298 - R 77 -11.1 -3.12395 | gap 1, opp_overlap 2640281, overlap 2640297 GCCATCAGGCAAAAT GCCGGGT-GGCG CTT CGCTTACCCGGC CTACAAAAACACCGT yfhI 2641622 - 2640339 - | aminopeptidase B TERM 3506 2640512 - 2640487 - G 83 -7.4 -4.53705 | opp_overlap 2640487 2640503 AAGTGCGACAGAAAA CCCGCGGCGG TGCTTG CCCCGGCGGG ATACGTCGCGCTGCC TERM 3507 2641249 - 2641278 + g 71 -10.7 -3.24747 | opp_overlap 2641226, overlap 2641268 GCGCGCTGCGCCAGT TGCTCCGGCCCAA GCTC TTCCGCCGGAGCA TTAATGGTGTCGCGC TERM 3508 2641666 - 2641645 - R 76 -9.3 -3.78775 | opp_overlap 2641645 TTCCTTATTAGCAAA CGGGCCGTC GTAG GGCAGCCCG TTATTTGACTTACTC TERM 3509 2641645 - 2641666 + r 79 -9.3 -4.02051 | opp_overlap 2641645 TTCCTTATTAGCAAA CGGGCCGTC GTAG GGCAGCCCG TTATTTGACTTACTC yfhJ 2641876 - 2641676 - | hypothetical protein fdx 2642223 - 2641888 - | ferredoxin hscA 2644075 - 2642225 - | chaperone protein HscA hscB 2644603 - 2644088 - | co-chaperone HscB TERM 3510 2644172 - 2644190 + g 100 -16 -3.33315 | GCGCACCGTATCCGC CGCCGCGT CCC ACGCGGCG TTGTCCAACTGTTCC TERM 3511 2644345 - 2644334 - G 71 -7.2 -3.96148 | opp_overlap 2644336 TTGTTCCATCAGAAA CGCG GTGT CGCG TACCGTATGCTGCTC TERM 3512 2644661 - 2644635 - R 79 -8.7 -4.30719 | gap 1, opp_overlap 2644635 GCCTGTCAGAACAAA CCCCACACGCAG GCGA CCACG-GTGGGG TTATACCTTCTTACT TERM 3513 2644708 - 2644741 + r 70 -9.5 -3.09933 | TTGTCTGCGCGGGTT CCCCCAGTCACTTAC TTAA GTAAGCGCCTGGGGA TTCACTCGCTTGCCG iscA 2645123 - 2644800 - | iron-sulfur cluster assembly protein nifU 2645538 - 2645152 - | scaffold protein STY2789 2646780 - 2645566 - | cysteine desulfurase yfhP 2647455 - 2646961 - | DNA-binding transcriptional regulator IscR TERM 3514 2647478 - 2647490 + r 91 -6.2 -5.55769 | TTAACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA TERM 3515 2647596 - 2647653 + r 71 -7.8 -3.92373 | gap 3, overlap 2647597 CAGGTATTTAGCGTT CCGTGCGGTATTGATGTGCCGGATG-GCG CTT CGCTTATCCGGCCTA-CAG-GCCGCACGA TTTGTAGGTCGGATA TERM 3516 2647597 - 2647652 + r 75 -11.3 -2.95102 | gap 3, overlap 2647596 AGGTATTTAGCGTTC CGTGCGGTATTGATGTGCCGGATG-GCG CTT CGCTTATCCGGCCTA-CAG-GCCGCACG ATTTGTAGGTCGGAT STY2791 2648428 - 2647697 - | putative RNA methyltransferase TERM 3517 2648107 - 2648095 - G 70 -3.3 -4.77036 | overlap 2648096 2648098 GCTCACGACCAAAAA CCAGC GCA ACCGG CGTATTTGCCGCTTC TERM 3518 2648565 - 2648593 + G 72 -12.3 -2.69964 | overlap 2648560 CATCCGATGCTGACC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATGTAATTGCCAA suhB 2648547 - 2649350 + | inositol monophosphatase TERM 3519 2649358 - 2649383 + F 95 -16.9 -2.74784 | overlap 2649355 2649354 AGCGCTAAGTCTCTT CGGCGGATGGG GCCA CTCATCCGCCG TGCCTTTTCAGGCGT TERM 3520 2649734 - 2649722 - g 70 -6.9 -4.09685 | opp_overlap 2649722 2649721 2649724 CGGCAGGCCGGAAAA CGCCG TCG CGACG GTGATTCATGTCCAT STY2793 2649495 - 2650373 + | hypothetical protein TERM 3521 2650631 - 2650655 + G 89 -9.1 -4.57569 | overlap 2650629 GGCGCGTGTTTGCCC CGTCCGCAGAG TTT CGCGGCGGGCG TTTTTCCGACACTGA TERM 3522 2651437 - 2651413 - g 71 -4.2 -4.56597 | gap 1, overlap 2651415 GGTTTTCGCGAAAAA CCCGGCGAGCG TCTG CGCT-ACCGCG CCCTGCATAAGGTCA asrA 2650555 - 2651598 + | anaerobic sulfite reductase subunit A TERM 3523 2651653 - 2651629 - g 74 -8.6 -3.96148 | gap 1 TCCTGTCATGATAAA CCGCAGCACAG TTTG CTGC-CTGCGG CGTACCGCATCCTCA asrB 2651602 - 2652420 + | anaerobic sulfite reductase subunit B TERM 3524 2653180 - 2653168 - g 93 -9.1 -4.77438 | overlap 2653170 2653171 ACGCACCAGTAAAAA GACGC CGC GCGTC GGCAAGCTCTTCCTC asrC 2652431 - 2653444 + | anaerobic sulfite reductase subunit C STY2799 2655059 - 2654421 - | hypothetical protein TERM 3525 2655536 - 2655520 - g 100 -10.1 -5.00616 | opp_overlap 2655529, overlap 2655529 2655532 CCCGGCCTTAAAAAA CGCGCTA AAG CAGCGCG GTATCGCGCGTCCGC TERM 3526 2655899 - 2655916 + G 74 -10.5 -3.53012 | CTGCGACTGGAGGTG GCGCGGC TGGT GCTGCGC TTTCGAGAAAAAGGG TERM 3527 2656334 - 2656322 - g 71 -4.7 -4.57073 | opp_overlap 2656333 CAGGCGTTTCAAAAA GAGGG ATG CCCGC GCGGCGTAGCGCTGA csiE 2655185 - 2656462 + | stationary phase inducible protein CsiE hcaT 2657596 - 2656457 - | putative 3-phenylpropionic acid transporter TERM 3528 2656802 - 2656820 + g 70 -3 -4.72272 | CAGCAAGTCGCGGGC GCTAAACC GGC GGAATAGC TTTTTACTCAGGGCA TERM 3529 2657716 - 2657678 - R 93 -12.5 -3.69621 | gap 1, opp_overlap 2657679 2657680, overlap 2657679 AGGGAGAAGTTCAAA CGGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCA-CG TTATGGCGCATAAGT TERM 3530 2657716 - 2657679 - R 79 -12.7 -2.81291 | opp_overlap 2657679 2657680, overlap 2657678 GGGAGAAGTTCAAAC GGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCACG TTATGGCGCATAAGT TERM 3531 2657680 - 2657715 + r 76 -11.8 -2.57931 | opp_overlap 2657678 2657679, overlap 2657679 GGAGAAGTTCAAACG GCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCAC GTTATGGCGCATAAG glyA 2659034 - 2657781 - | serine hydroxymethyltransferase TERM 3532 2660524 - 2660510 - g 73 -5 -4.56133 | CGTGAATAACGAAAA CATTCA TTA CGAATG CTTCGGCCCGCATAA hmpA 2659359 - 2660549 + | nitric oxide dioxygenase TERM 3533 2660600 - 2660573 - f 85 -6.9 -5.01732 | opp_overlap 2660573, overlap 2660561 AATCCGCTGAAAAAA CGGGCGTTATC GTTAAG GCGAACGCCCG TTTTCCTCCCCGTTC TERM 3534 2660573 - 2660600 + F 74 -6.9 -4.2679 | opp_overlap 2660561 2660573 AATCCGCTGAAAAAA CGGGCGTTATC GTTAAG GCGAACGCCCG TTTTCCTCCCCGTTC TERM 3535 2661211 - 2661197 - g 81 -7 -4.7657 | opp_overlap 2661197, overlap 2661190 TAAAAAGGCGAAAAA GCCGCG TAT CGCCGC TTTCTGGACGTGGGT TERM 3536 2661740 - 2661751 + G 72 -3.6 -4.82901 | opp_overlap 2661727, overlap 2661743 AACGCCGCAAAATAC CGCG CTGA TGCG TTTTTATGAGGCGCG cadC 2660730 - 2662274 + | DNA-binding transcriptional activator CadC TERM 3537 2662331 - 2662298 - f 73 -7.8 -4.02022 | gap 1, opp_overlap 2662298 2662303 2662330, overlap 2662303 CTGAACCATGACAAA TAAAAGCGAAAAGAT ATTAA AT-TTTTCGCTTTTA TTTTGTGAAAAATAT TERM 3538 2662298 - 2662331 + F 86 -9.1 -4.38154 | opp_overlap 2662298 2662303, overlap 2662303 2662330 CTGAACCATGACAAA TAAAAGCGAAAAGAT ATTA AATTTTTCGCTTTTA TTTTGTGAAAAATAT TERM 3539 2662303 - 2662326 + F 79 -4.6 -5.18371 | opp_overlap 2662298 2662303, overlap 2662298 CCATGACAAATAAAA GCGAAAAGAT ATTA AATTTTTCGC TTTTATTTTGTGAAA TERM 3540 2662326 - 2662303 - f 74 -3.3 -5.02323 | gap 1, opp_overlap 2662303 2662298, overlap 2662298 CCATGACAAATAAAA GCGAAAAGAT ATTAA AT-TTTTCGC TTTTATTTTGTGAAA TERM 3541 2662383 - 2662344 - f 78 -6.6 -4.57569 | opp_overlap 2662330 2662344 TTATTTTGTGAAAAA TATGTTGCAAAAAATAGC TTAT GTTAATTTTGGCAACATA TTCATCGCAAAGAAA TERM 3542 2662824 - 2662814 - g 77 -4.6 -4.8622 | opp_overlap 2662817, overlap 2662815 2662816 GCTGGCAACCAAAAA CCCG CAA CAGG GTGGCCCTATCGCTT cadB 2662623 - 2663954 + | lysine/cadaverine antiporter cadA 2664037 - 2666181 + | lysine decarboxylase TERM 3543 2666220 - 2666182 - f 76 -8.3 -4.14543 | gap 1, opp_overlap 2666190, overlap 2666179 2666190 GAAAATACGAAATAA GT-ACCAAAGGGAAGTGG CTTG CCACTTCCCTTTTTTCAC GCAGCAAGGAGACTT TERM 3544 2666211 - 2666190 - f 100 -14.5 -3.90738 | opp_overlap 2666190, overlap 2666182 2666179 GAAATAAGTACCAAA GGGAAGTGG CTTG CCACTTCCC TTTTTTCACGCAGCA TERM 3545 2666190 - 2666211 + F 100 -14.5 -5.00616 | opp_overlap 2666182 2666179 2666190 GAAATAAGTACCAAA GGGAAGTGG CTTG CCACTTCCC TTTTTTCACGCAGCA STY2807 2666237 - 2667697 + | putative transmembrane transport protein glnB 2668084 - 2667746 - | nitrogen regulatory protein P-II 1 yfhA 2669498 - 2668161 - | putative transcriptional regulator yfhG 2670259 - 2669495 - | hypothetical protein TERM 3546 2669857 - 2669880 + g 73 -5.2 -4.65895 | gap 1, overlap 2669860 2669862 CCAGACGGGTCACTA TGGCG-CGCCG CTC CGGCGGCGTAA TTTTTGCATCCGCCA TERM 3547 2669862 - 2669877 + g 78 -11.8 -3.26405 | overlap 2669860 2669857 CGGGTCACTATGGCG CGCCGC TCCG GCGGCG TAATTTTTGCATCCG STY2811 2671646 - 2670261 - | putative sensor kinase protein TERM 3548 2671650 - 2671638 - G 76 -5.5 -4.78107 | CAGGATCAGCAAAAA GGCCA GCA TGACC AATTGTCGTAAAGAA TERM 3549 2671781 - 2671751 - R 100 -17 -2.88544 | opp_overlap 2671754 2671758, overlap 2671754 2671758 GGGGAGCGTCAGATA CAACAAAGCCGGGC TAA ACCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3550 2671754 - 2671778 + r 100 -15.8 -3.32844 | opp_overlap 2671751 2671754 2671758, overlap 2671758 GAGCGTCAGATACAA CAAAGCCGGG CTAAA CCCGGCTTTG TTATGGAATAAGGCG TERM 3551 2671778 - 2671754 - R 100 -16.5 -3.59202 | opp_overlap 2671754 2671758, overlap 2671751 2671758 GAGCGTCAGATACAA CAAAGCCGGGC TAA ACCCGGCTTTG TTATGGAATAAGGCG TERM 3552 2671774 - 2671758 - R 95 -11.5 -4.42974 | opp_overlap 2671758 2671754, overlap 2671754 2671751 GTCAGATACAACAAA GCCGGGC TAA ACCCGGC TTTGTTATGGAATAA TERM 3553 2671758 - 2671774 + r 90 -10.8 -4.32177 | opp_overlap 2671754 2671751 2671758, overlap 2671754 GTCAGATACAACAAA GCCGGG CTAAA CCCGGC TTTGTTATGGAATAA TERM 3554 2672147 - 2672166 + r 71 -7.8 -3.92324 | opp_overlap 2672138, overlap 2672138 2672148 AACCTATCCCCACTC ATGTCGGG ATTT CCCGACAC TTTAATCTTGCGGCA TERM 3555 2672148 - 2672165 + r 75 -11.3 -2.95073 | opp_overlap 2672138, overlap 2672138 2672147 ACCTATCCCCACTCA TGTCGGG ATTT CCCGACA CTTTAATCTTGCGGC TERM 3556 2672321 - 2672303 - R 100 -11.7 -5.24129 | opp_overlap 2672303 GCCGTCTACAAAAAA GCCCCTC GTGAA GAGGGGC TTAATGGCTATCGGG TERM 3557 2672303 - 2672321 + r 79 -11.7 -3.20382 | opp_overlap 2672303 GCCGTCTACAAAAAA GCCCCTC GTGAA GAGGGGC TTAATGGCTATCGGG purL 2676228 - 2672341 - | phosphoribosylformylglycinamidine synthase TERM 3558 2676503 - 2676493 - g 78 -2.6 -5.1848 | opp_overlap 2676493 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG TERM 3559 2677757 - 2677747 - g 70 -3.2 -4.74103 | CTGTTAAGCCAAAAA CCGT ATT ACAG TAAGCTAACCTACGG yfhD 2676484 - 2677911 + | putative transglycosylase TERM 3560 2678086 - 2678114 + T 79 -9.4 -4.17132 | overlap 2678113 GCATTGCGCTATACT GCCGGCCCCGCG CCTTC CGCACGGTCGGC TTTCTTCAGAGCTTT yfhC 2678630 - 2678079 - | tRNA-specific adenosine deaminase TERM 3561 2678254 - 2678266 + g 71 -4.7 -4.65895 | opp_overlap 2678249 ACGTCAATTAGCGAT CCGGC CGC GCCAG TTTTTGCATCGCGCG yfhB 2679290 - 2678655 - | hypothetical protein TERM 3562 2679274 - 2679264 - G 81 -2.4 -5.38497 | overlap 2679266 2679267 2679269 ATCCAAATCAAAAAA GACG ACA CGAC GCTCGTGGCTGACCA STY2816 2680655 - 2679294 - | putative PTS system IIBC component TERM 3563 2679553 - 2679539 - G 71 -4.2 -4.62069 | GCGTGACGCCAAAAA TCAGCG GCT CGCCAA TCCCCAGCAGTCCGA murQ 2681559 - 2680666 - | N-acetylmuramic acid-6-phosphate etherase yfhH 2681675 - 2682523 + | putative DNA-binding transcriptional regulator TERM 3564 2682555 - 2682527 - T 83 -9.6 -4.0896 | opp_overlap 2682547 AAACTGGTTTGAAAA TGGCTCTTCCGC CTCAT GCAGAAGAGCTA TCAAGTTTATTGCGC STY2819 2683479 - 2682562 - | 2-dehydropantoate 2-reductase STY2820 2684697 - 2683501 - | putative transmembrane transport protein TERM 3565 2685032 - 2684990 - g 75 -3.7 -4.85545 | opp_overlap 2684991 2684994, overlap 2684991 2684994 ATTAAATTAACAAAA GCAGGCATTATTTTG-CAACG ACA CGCTAACAAAATAATG-CTGG ATTTAAAAAATGCCG STY2821 2684813 - 2685724 + | putative transcriptional regulator STY2822 2685777 - 2686037 + | putative ferredoxin acpS 2686529 - 2686149 - | 4'-phosphopantetheinyl transferase TERM 3566 2686405 - 2686387 - G 74 -6.6 -4.36914 | CGCTTGGCGAGAAAA CGCACCGG CTG CTGATGCG TCTCCCAGATAGCCC pdxJ 2687260 - 2686529 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 3567 2686728 - 2686750 + g 71 -6.2 -4.28254 | overlap 2686730 GCCGCCAGGGTCGCG GCGCTGGC AATACGC GCCAGCTC TTTTGCCTGTTCCGC recO 2688000 - 2687272 - | DNA repair protein RecO TERM 3568 2687313 - 2687330 + g 78 -6.9 -4.66264 | opp_overlap 2687312 2687311 GTTTGGGCATAAATT GCCGGAA CAGC TCCCGGC TTTTTAACGGTTTTC era 2688917 - 2688012 - | GTP-binding protein Era rnc 2689594 - 2688914 - | ribonuclease III TERM 3569 2689850 - 2689818 - R 100 -13.6 -4.015 | gap 1, opp_overlap 2689815 TTATCCAGGAAATAA TTCACGCTGCCG-CT AAAA AGACGACAGCGTGAA CGATCATTTCGCCAC lepB 2690842 - 2689868 - | lsignal peptidase I lepA 2692658 - 2690859 - | GTP-binding protein LepA TERM 3570 2690955 - 2690969 + g 85 -2.1 -5.45652 | TTTCTTACCTTCTTT CTGTT TCTGC AGCAG TTTTTTCTTACGACT rseC 2693396 - 2692917 - | SoxR reducing system protein RseC TERM 3571 2693140 - 2693130 - G 73 -5.4 -4.55295 | overlap 2693132 CGCCGCACAAAGAAA TAGC CCC GCTA AAGGCGACATATAGA rseB 2694349 - 2693393 - | periplasmic negative regulator of sigmaE TERM 3572 2694263 - 2694290 + g 74 -9.7 -3.72576 | opp_overlap 2694263 CATCTGCTGCAATAA CGCCCCGGACG CAGGGT CGGCCGAGGCG TTTACTGAGAAGAAC TERM 3573 2694290 - 2694263 - G 83 -11.9 -3.61715 | opp_overlap 2694263 CATCTGCTGCAATAA CGCCCCGGACG CAGGGT CGGCCGAGGCG TTTACTGAGAAGAAC rseA 2694999 - 2694349 - | anti-RNA polymerase sigma factor SigE TERM 3574 2694700 - 2694720 + g 76 -3.2 -5.00616 | gap 1, overlap 2694701 GCCCATTTGGGTAAG CTGCG-CCG CCCA CGGACGCAC TTTTTTCCAGAACGG rpoE 2695606 - 2695031 - | RNA polymerase sigma factor RpoE TERM 3575 2695704 - 2695724 + H 73 -2.5 -5.1502 | overlap 2695706 TTAGAGTGTCTATGT TTCGTAAAG TTC CGTTACGCA TTTGTTTTTGTTTGT TERM 3576 2696178 - 2696198 + G 70 -8.9 -3.72576 | overlap 2696181 2696189 TCCACGTTTTATGCA CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACCGAC TERM 3577 2696899 - 2696880 - g 76 -12.1 -3.15544 | opp_overlap 2696878 2696890 2696890 2696892 CCGGACGTTGACGAA CGCGGCG AACTGG CGCCGCG CGATATTGTCGCCCG TERM 3578 2697548 - 2697579 + G 72 -12.4 -2.59431 | gap 1, opp_overlap 2697557, overlap 2697544 GCGTTGCGCGATGAT GCGTAAAGAG-AGCC GGG GGCTGCACTTTACGC TGGATTATCCGCAAC nadB 2696031 - 2697653 + | L-aspartate oxidase yfiC 2698375 - 2697638 - | hypothetical protein TERM 3579 2697749 - 2697731 - G 75 -11.7 -2.90496 | overlap 2697728 TCTGTCGCTAAAGCA CTCCCCG GCTTG CGGGGAG AATGCGAGCAAAACC TERM 3580 2698411 - 2698398 - H 100 -9.5 -5.03145 | CAACCTTGCAAAAAA CGGCG ACAG CGCCG AGTGAAAACAATACC TERM 3581 2698687 - 2698668 - g 89 -9.2 -4.62783 | CAGGCACCGGAAAAA CGGCGGCA TATC TGCTGCCG GCGTTGCAGCACCTG srmB 2698505 - 2699839 + | ATP-dependent RNA helicase SrmB TERM 3582 2699867 - 2699846 - f 93 -14.5 -3.44206 | opp_overlap 2699846 GAAGAGTGATGATAA TGCCGGGTT CGTT AACCCGGCA TTTTTTATCTTCCAC TERM 3583 2699846 - 2699867 + F 100 -14.5 -5.47159 | opp_overlap 2699846 GAAGAGTGATGATAA TGCCGGGTT CGTT AACCCGGCA TTTTTTATCTTCCAC yfiK 2700857 - 2701444 + | neutral amino-acid efflux protein TERM 3584 2701421 - 2701433 + T 77 -3.3 -5.14563 | overlap 2701420 TTACTGCTGGTGTAC TGCGC GGT GCGGA TTTTTTACTGACACA TERM 3585 2701461 - 2701485 + T 100 -14.3 -3.94877 | opp_overlap 2701461 ACAAATAAAACAAAA GCGGAAAAGGC CCG GCCTCTTCCGC TTGTTATTACCGGAT TERM 3586 2701485 - 2701461 - T 100 -16.5 -5.3689 | opp_overlap 2701461 ACAAATAAAACAAAA GCGGAAAAGGC CCG GCCTCTTCCGC TTGTTATTACCGGAT yfiD 2701889 - 2701506 - | autonomous glycyl radical cofactor GrcA TERM 3587 2702781 - 2702795 + G 91 -7.8 -5.1287 | CATCCCTCGCCACTC TCTGCG CAC CGCGGA TTTTTTGGCTGTAAC ung 2702208 - 2702897 + | uracil-DNA glycosylase TERM 3588 2702901 - 2702913 + T 74 -6.9 -4.37092 | overlap 2702902 GAGAGTGAATAACGT TGGCG ACT CGCCG TTTTATCGCCCGGAT TERM 3589 2702932 - 2702945 + T 75 -9.5 -3.48276 | opp_overlap 2702931 2702932 2702942 TATCGCCCGGATAAC GGCGC GAAA GCGCC TTGTCTGACCGGGCG yfiF 2704050 - 2703013 - | putative methyltransferase TERM 3590 2703489 - 2703511 + g 100 -10.6 -4.72272 | CCTGCTTTACCCATT GCTTAACGGT CGT ACCGTTACGC TTTTTAATCAGGAAA TERM 3591 2703816 - 2703854 + g 93 -13.1 -4.00934 | gap 1 CTTTCTCAGGCGTTT CATCGCC-TGGCGCGCGG GACA CGGTGCGCCACGGCGAAG TTTCATGTTTACGGT TERM 3592 2704227 - 2704207 - H 87 -10.4 -4.14193 | opp_overlap 2704207 2704226 ATAACATTATAGAAA CATCCCGC GCGTA GCGGGACG TCTTCCGACGTATTC yfiG 2704254 - 2704673 + | thioredoxin 2 TERM 3593 2704680 - 2704700 + F 100 -14.7 -4.16943 | opp_overlap 2704675 2704676, overlap 2704674 GCGCTGTAAACGCCA CGGGGCGCA TCT TGTGCCCCG TTTTCACCTCTGCCA TERM 3594 2704885 - 2704906 + G 76 -2.9 -5.01497 | overlap 2704892 2704897 TGTGTGATACGTTAA CGCCTTCTC AGGC GAAAAGCCG TTTTTGTCTGGTCAT STY2843 2704746 - 2705426 + | hypothetical protein TERM 3595 2706201 - 2706183 - g 81 -8 -4.25104 | TTCTGGTGATTAAAA GCGGCCGA AGC CCGGCAGC CCAGCGTTTACTTAA STY2844 2705480 - 2708140 + | putative acyl-CoA synthetase TERM 3596 2708396 - 2708385 - g 71 -5.8 -4.3739 | opp_overlap 2708386, overlap 2708372 2708386 CACTGCTGGAGAAAA TCGC CAGC GCGA CGCAGCGTATTTGTA pssA 2708255 - 2709610 + | phosphatidylserine synthase TERM 3597 2709617 - 2709633 + F 89 -9.4 -4.66938 | opp_overlap 2709616 ATCCTGTAATCGAAG CCCCGT CCTGT ACGGGG TTTTCTCTTAGGAGT yfiM 2709655 - 2709978 + | hypothetical protein kgtP 2711276 - 2709975 - | alpha-ketoglutarate transporter TERM 3598 2711077 - 2711059 - G 90 -5.8 -5.15634 | opp_overlap 2711060, overlap 2711060 2711061 GACCGCATTAAAAAA CCGGCGGC AAA GACGCCTG CCGTTTGCAAAAGCT TERM 3599 2711296 - 2711308 + r 72 -2.6 -5.08255 | overlap 2711285 TTCTCCTTGTTGCCA GGCT TAATC GGCC TTTTATTTTGGAGAT STY2848 2711835 - 2711380 - | hypothetical protein TERM 3600 2711968 - 2712012 + r 79 -11.4 -3.30243 | gap 1, opp_overlap 2711967 2711968, overlap 2711993 2711995 TGTAGGCCGGATAAG GCGAAGCTGCCATCCGGCGGT GCAG GTTGCCTGATGGC-GCTGCGC TTATCAGGCCTACAT TERM 3601 2712085 - 2712044 - R 100 -16.7 -2.82015 | opp_overlap 2712047 2712052 2712055, overlap 2712052 2712055 TTTACAGTTACCACA CACGCAAAGAAGCCCGTCC GTCA GAACGGGCTTCTTCACTTG TCTGATGCCTGGCAG TERM 3602 2712047 - 2712082 + r 79 -10.4 -3.55447 | opp_overlap 2712044 2712052 2712055, overlap 2712052 2712055 ACAGTTACCACACAC GCAAAGAAGCCCGTCC GTCA GAACGGGCTTCTTCAC TTGTCTGATGCCTGG TERM 3603 2712052 - 2712077 + r 83 -13.3 -3.27164 | opp_overlap 2712044 2712052 2712055, overlap 2712047 2712055 TACCACACACGCAAA GAAGCCCGTCC GTCA GAACGGGCTTC TTCACTTGTCTGATG TERM 3604 2712077 - 2712052 - R 100 -15.5 -3.74792 | opp_overlap 2712052 2712047 2712055, overlap 2712044 2712055 TACCACACACGCAAA GAAGCCCGTCC GTCA GAACGGGCTTC TTCACTTGTCTGATG TERM 3605 2712055 - 2712074 + r 76 -9.2 -3.76837 | opp_overlap 2712052 2712044 2712055, overlap 2712052 2712047 CACACACGCAAAGAA GCCCGTCC GTCA GAACGGGC TTCTTCACTTGTCTG TERM 3606 2712074 - 2712055 - R 87 -11.4 -3.99985 | opp_overlap 2712055 2712052 2712047, overlap 2712052 2712044 CACACACGCAAAGAA GCCCGTCC GTCA GAACGGGC TTCTTCACTTGTCTG TERM 3607 2712157 - 2712171 + r 71 -7.8 -3.99324 | opp_overlap 2712157 TGCGCAACGTTCAAA TCCGCT CCC GGCGGA TTTGTCCTCCTCAGG TERM 3608 2712212 - 2712253 + r 100 -17.5 -3.76224 | opp_overlap 2712216 2712222, overlap 2712216 2712222 CCGGCAGACCACAGA TAAAGCAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGCTTAA TTTGATGCCTGGCAG TERM 3609 2712216 - 2712249 + r 100 -18.3 -3.57418 | opp_overlap 2712216 2712222, overlap 2712212 2712222 CAGACCACAGATAAA GCAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGC TTAATTTGATGCCTG TERM 3610 2712249 - 2712216 - R 100 -20.5 -4.16301 | opp_overlap 2712216 2712212 2712222, overlap 2712222 CAGACCACAGATAAA GCAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGC TTAATTTGATGCCTG TERM 3611 2712222 - 2712243 + r 90 -10.1 -4.5287 | opp_overlap 2712216 2712222, overlap 2712216 2712212 ACAGATAAAGCAAAA GGCCCAGTC TTTC GACTGAGCC TTTTGCTTAATTTGA TERM 3612 2712243 - 2712222 - R 100 -12.3 -4.66057 | opp_overlap 2712222 2712216 2712212, overlap 2712216 ACAGATAAAGCAAAA GGCCCAGTC TTTC GACTGAGCC TTTTGCTTAATTTGA TERM 3613 2714936 - 2714954 + r 70 -8.8 -3.35798 | overlap 2714939 TTCACCACTGGCTTA GTGGTGGG GCT CCCACTGC TTGTACGTACACGGT TERM 3614 2714988 - 2715000 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3615 2715542 - 2715566 + r 71 -8 -3.93061 | gap 1, opp_overlap 2715540 2715548, overlap 2715544 2715545 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 3616 2715605 - 2715642 + r 77 -3.4 -5.14563 | opp_overlap 2715601 2715607, overlap 2715607 ATTTTTAAAGAGCAA AACTTCGCAGTGAACC CTTTCA GGTACACTCTGAAGTA TTTTTTCGTAAACAC TERM 3617 2717739 - 2717755 + r 76 -5.1 -4.75954 | TATATTACGCTTTCC CGCTTCA GAG TCAAGCG TTTATTTTCGCTTTT TERM 3618 2717976 - 2717959 - R 100 -10.5 -5.27335 | opp_overlap 2717959 GTTTTTAAACAAAAA CGAGCCC GTTA GGGCCCG TTTTATTCAAATTTG TERM 3619 2717959 - 2717976 + r 84 -8.3 -4.6971 | opp_overlap 2717959 GTTTTTAAACAAAAA CGAGCCC GTTA GGGCCCG TTTTATTCAAATTTG clpB 2720569 - 2717996 - | protein disaggregation chaperone TERM 3620 2719024 - 2719036 + g 73 -5.5 -4.59773 | overlap 2719023 CTTCCGACTGGGTCG CGGCT TCC AGCTG TTTTTCCAGCTCCGG yfiH 2721430 - 2720699 - | hypothetical protein TERM 3621 2720903 - 2720885 - G 71 -4.5 -4.56597 | opp_overlap 2720885 CCCGTGCGGCAAAAA TGCGCTA TCGGC TTGCGCA TCTTTTGCTAAAAAT TERM 3622 2720928 - 2720918 - G 78 -6.8 -4.56775 | ATCTTTTGCTAAAAA TGCG TCA CGCA CTTCCGGCCCCACTT rluD 2722407 - 2721427 - | 23S rRNA pseudouridine synthase D TERM 3623 2722439 - 2722449 + H 74 -8.2 -3.8766 | TAACGTTGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC STY2852 2722539 - 2723276 + | outer membrane protein assembly complex subunit YfiO TERM 3624 2723321 - 2723292 - f 93 -15.1 -2.8917 | opp_overlap 2723297, overlap 2723297 AGCAATACCAACAAG CAAAACGGCAGCC TTCC GGCTGCCGTTTTT TTATTCGATATCTGA TERM 3625 2723297 - 2723316 + F 100 -15 -5.8187 | opp_overlap 2723297 2723292 TACCAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGATA TERM 3626 2723316 - 2723297 - f 100 -15 -4.5774 | opp_overlap 2723297, overlap 2723292 TACCAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGATA TERM 3627 2723484 - 2723469 - f 72 -6.2 -4.35693 | opp_overlap 2723468 AAAGTGACAAAATAA TGTGAT TTAC ATCACA CATTTTGACATTAAG yfiA 2723548 - 2723886 + | translation inhibitor protein RaiA TERM 3628 2723912 - 2723927 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGG STY2853a 2723990 - 2724037 + | Phe leader peptide TERM 3629 2724086 - 2724106 + F 100 -14 -5.5112 | opp_overlap 2724086 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3630 2724106 - 2724086 - f 100 -14 -4.03167 | opp_overlap 2724086 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3631 2724883 - 2724857 - g 71 -4.3 -4.67353 | overlap 2724859 2724871 2724872 GCAGCGATGGAAAAA GTCGCGCAG GCAAACTCT CCGCGCGTC GCGGCGCTCGGCAGC pheA 2724137 - 2725297 + | bifunctional chorismate mutase/prephenate dehydratase STY2855 2726166 - 2725258 - | hypothetical protein TERM 3632 2725467 - 2725483 + g 76 -12.3 -3.0497 | opp_overlap 2725467 2725466 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3633 2725483 - 2725467 - G 72 -12.3 -2.57564 | opp_overlap 2725467, overlap 2725466 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3634 2725524 - 2725514 - G 71 -8.2 -3.85698 | overlap 2725515 CCTTGCGGTGAGAAA CGCG CCA CGCG CCAGCCGTCAAACAT TERM 3635 2725849 - 2725838 - G 72 -3.6 -4.82901 | GTTCCGGCATAAAAA CGGC CATC GCCA TCAGTGCCGCCATCG TERM 3636 2725992 - 2725969 - G 77 -7.4 -4.31433 | overlap 2725971 CATGGCCACAATAAA TCCGCCCTGC TCAC GCAAGGCAAA ACAGCCTACCTCTTC TERM 3637 2726189 - 2726203 + r 91 -11.4 -4.36262 | opp_overlap 2726189 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT TERM 3638 2726203 - 2726189 - R 100 -11.4 -5.37593 | opp_overlap 2726189 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT tyrA 2727345 - 2726224 - | bifunctional chorismate mutase/prephenate dehydrogenase aroF 2728425 - 2727355 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3639 2728114 - 2728132 + g 77 -8.1 -4.11216 | gap 1 AATCAGCCCTTTCCA GCCGACGG TAGT CCG-CGGC TTTTCAAAATAGACG TERM 3640 2728279 - 2728261 - G 71 -10.2 -3.24925 | ACCGCATACCACCAA CAGACGCG GAT CGCGCCCG GCAATAATGTCAGAA TERM 3641 2728635 - 2728649 + H 83 -4.2 -5.43514 | opp_overlap 2728634 2728635 2728637, overlap 2728634 2728637 GAAAAGCGGTAAAAT GAGCGA TGC TCGCTA TTTTTTGATTATTTT TERM 3642 2728637 - 2728647 + H 74 -6.8 -4.30543 | opp_overlap 2728635 2728634 2728637, overlap 2728634 2728635 AAAGCGGTAAAATGA GCGA TGC TCGC TATTTTTTGATTATT STY2858 2728865 - 2729383 + | hypothetical protein yfiN 2729376 - 2730596 + | hypothetical protein TERM 3643 2730720 - 2730682 - T 73 -11.1 -2.56596 | opp_overlap 2730687 2730690, overlap 2730690 GCGTGGAGCAACCCA TAAAAAAAGGGGCCAGC GTAAT GCCAGCCCCTTCTTTTC TACAAGCTTTCGGAT TERM 3644 2730687 - 2730715 + T 70 -5.1 -4.39002 | opp_overlap 2730682 2730690, overlap 2730690 GAGCAACCCATAAAA AAAGGGGCCAGCG TAA TGCCAGCCCCTTC TTTTCTACAAGCTTT TERM 3645 2730690 - 2730712 + T 74 -6.8 -4.30995 | opp_overlap 2730682 2730690, overlap 2730687 CAACCCATAAAAAAA GGGGCCAGCG TAA TGCCAGCCCC TTCTTTTCTACAAGC TERM 3646 2730712 - 2730690 - T 100 -10.5 -5.66684 | opp_overlap 2730690 2730687, overlap 2730682 CAACCCATAAAAAAA GGGGCCAGC GTAAT GCCAGCCCC TTCTTTTCTACAAGC rplS 2731100 - 2730753 - | 50S ribosomal protein L19 trmD 2731908 - 2731141 - | tRNA (guanine-N(1)-)-methyltransferase rimM 2732501 - 2731953 - | 16S rRNA-processing protein rpsP 2732768 - 2732520 - | 30S ribosomal protein S16 TERM 3647 2732822 - 2732795 - R 79 -7.6 -4.43307 | overlap 2732792 GTGTGAATAAAACAA CCGGGCCTCATC GAGG AACGGAGCCCGG CGTCATATTAAAAGC TERM 3648 2733136 - 2733115 - R 74 -11.5 -2.91144 | opp_overlap 2733106 2733107, overlap 2733112 CTAGCCGGGAAATTA GCGGCCTGG AAAA CCAGGCGGC ATCATCCCCTTCATA ffh 2734473 - 2733112 - | signal recognition particle protein TERM 3649 2734188 - 2734204 + g 73 -5.1 -4.64334 | opp_overlap 2734170 CTGGCGGCTGCGCAG CCAGATT CAG GGTCTGG TTTTCTTCGCCCATT TERM 3650 2734256 - 2734274 + g 74 -4.4 -4.72631 | opp_overlap 2734256, overlap 2734257 ACAATCTTGACGAAC TCCTGCCC TGG GGTCAGGC TTTTGTTAACTTCAT corE 2734639 - 2735430 + | hypothetical protein TERM 3651 2735622 - 2735612 - g 75 -4 -4.86033 | AAACGGGTAGAAAAA TTAC TGC GTAA ACCCGACCGACTGAT TERM 3652 2736515 - 2736484 - g 74 -7.2 -4.09685 | overlap 2736485 2736487 GGTCACGCCGCAAAA CGACGGTTCGGTCA TTAT TGACGGTACCGCCA ACGTCCGGGAAATCA corB 2735540 - 2736736 + | hypothetical protein TERM 3653 2736743 - 2736760 + F 100 -11.3 -5.252 | opp_overlap 2736742 2736743 GCGGAGTAACACAAT GGCGAAC TCCG GTTCGCC TTTTTTATCGCCGTC TERM 3654 2736760 - 2736743 - f 74 -11.3 -2.82449 | opp_overlap 2736743, overlap 2736742 GCGGAGTAACACAAT GGCGAAC TCCG GTTCGCC TTTTTTATCGCCGTC STY2867 2736857 - 2737414 + | hypothetical protein TERM 3655 2737487 - 2737467 - T 100 -9 -5.53288 | opp_overlap 2737463 TTTAAGCTAAAAAAA TGGCCGAC TTTAC ATCGGCCA TTAGACTTTTACTTC grpE 2738086 - 2737496 - | heat shock protein GrpE TERM 3656 2737914 - 2737956 + g 85 -4.9 -5.14563 | gap 1, overlap 2737916 AACACGGTGTCGCGT TCGCGAGTCTGG-GCTTCGG CAAG CTGAACTTCCAGATTCGCAA TTTTTTCATCGCGCG TERM 3657 2738052 - 2738064 + g 72 -2.6 -4.84673 | overlap 2738041 ATTTCTTCCGGGGCT TGCC CCTCA GGCG TTTTCTGTTCTTTAC TERM 3658 2738376 - 2738361 - g 80 -4.6 -5.13473 | overlap 2738362 ATTACAGCTAAAAAA TGTGCC AACC GGCACG CTGGCGGAAATTGGT ppnK 2738209 - 2739087 + | inorganic polyphosphate/ATP-NAD kinase TERM 3659 2739731 - 2739719 - g 71 -10.5 -3.27617 | CAACAAAGTCAGGAA CGCGC CGC GCGCG CGGAACTGCTGCAAT TERM 3660 2740113 - 2740098 - g 79 -7.6 -4.42806 | GCATCGCTAAACAAA TTTCGC TGGC GCGAAA ACATCACGTCAGCCC recN 2739173 - 2740834 + | recombination and repair protein smpA 2740983 - 2741321 + | hypothetical protein STY2872 2741777 - 2741487 - | hypothetical protein TERM 3661 2741610 - 2741621 + g 77 -4.4 -4.85782 | TTTTACCGGACGACT GTAG ATAC CTAC TTTATTTTTCGCCAG STY2873 2742243 - 2741767 - | hypothetical protein smpB 2742393 - 2742875 + | SsrA-binding protein TERM 3662 2742888 - 2742918 + F 71 -9.8 -3.23492 | overlap 2742886 2742889 TAATAGACATTTTTT GTGACCAGCTTC TCAGTAT GAAGCTGGTCAA TGTTCATATCTCATG TERM 3663 2742889 - 2742917 + F 80 -13.3 -2.53613 | overlap 2742888 2742886 AATAGACATTTTTTG TGACCAGCTTC TCAGTAT GAAGCTGGTCA ATGTTCATATCTCAT TERM 3664 2743352 - 2743331 - f 73 -2.4 -5.13354 | gap 1 GGCACAAAAAACAAA TGGTTATTC GACGA GAA-AACCA GACCTTCACCTACGC TERM 3665 2743872 - 2743905 + G 72 -11 -3.01712 | overlap 2743884 GTGGGTACTGGCTGG CGCGGTGGCGGC TGGCGGCATT GCCGCTATCGCG TCTTCCGGCGGCGGC TERM 3666 2745271 - 2745261 - g 78 -6.8 -4.56597 | CGGGCTGTTGAAAAA TGGC GAT GCCA CAGATGATAACCGCC TERM 3667 2745777 - 2745761 - g 71 -5.7 -4.37092 | overlap 2745763 ACGCGCCGGATAAAA CTGCGCC TGC GGCACCG AACGGTCTTATCGTG TERM 3668 2746004 - 2745983 - g 83 -10.1 -4.08689 | gap 1, overlap 2745936 TAGCGAACAACGAAA GCGCCG-CCG CGA CGGTCGACGC GCCGGACAGTACCGC TERM 3669 2746858 - 2746833 - g 74 -10.5 -3.61268 | gap 1, overlap 2746836 GAGCGAAGGGTTAAA CATCC-TGACGG CCA CCGCCACGGATG CCGCAGGCAATAGTA TERM 3670 2749003 - 2748989 - g 76 -12.8 -2.73875 | overlap 2748986 CGGCGGGCAATACCA GCGCGG TCT CCGCGC CGTGGACGATCGTGG TERM 3671 2751645 - 2751635 - g 72 -4 -4.77173 | TGCCGACAAAACAAA TTGA AGG TCAA CTCATTAACGTGACG TERM 3672 2752294 - 2752266 - g 87 -13.2 -3.21416 | gap 1, opp_overlap 2752279 CACCGCCATCACCAA CGCCAA-CGGCGT CAGT ACGCCGGTCGGCG CGGGCGGCGTGGATA TERM 3673 2753058 - 2753028 - g 71 -7.4 -3.93288 | CCTCACTGAAGTAAA CGGCGTGGCGATTG CGG CGACCGGCACGACG GAGGTAAATGGGCTG TERM 3674 2753140 - 2753127 - g 74 -9.5 -3.64487 | CTACACGCTGAAGAA CGGCG TCGG CGCCG ACAGCATTAAAACGC STY2875 2743495 - 2754369 + | large repetitive protein TERM 3675 2754401 - 2754376 - f 100 -16.9 -4.82901 | GGCGGTTGATAAAAA GCCCCGAACGC CACG ACGTTCGGGGC AACAAGCGGTGATAT STY2876 2754433 - 2755842 + | putative type I secretion protein TERM 3676 2756840 - 2756820 - g 100 -7.5 -5.78622 | GCACTGCAAAAAAAA CTGGCTGTC CTC GCCAACCAG GCCGCCCACGAAGCG TERM 3677 2756919 - 2756930 + G 74 -7.2 -4.16016 | opp_overlap 2756910 2756927 ATTAAACTGATGCAG GCGG AGAA CCGC TTTCTTCAGCAGTGG STY2877 2755839 - 2757995 + | putative type I secretion protein, ATP-binding protein STY2878 2758027 - 2759190 + | putative type I secretion protein TERM 3678 2759362 - 2759347 - T 79 -3.2 -5.4477 | overlap 2759349 AAAGCCGCAAAAAAA TAGTCG CAAA CGACGA AACCTACGCTTTAGC TERM 3679 2759636 - 2759657 + T 100 -8.7 -5.68438 | opp_overlap 2759635 2759636 ACCAAATAAATCAAG GGGTTACGT GAAA GCGTAGCCC TTTTTTCTTTGGTAG STY2879 2760506 - 2759733 - | putative reverse transcriptase TERM 3680 2760295 - 2760279 - GT 74 -2.3 -5.08824 | CGTTGACTGAAAAAA TTGTTTA ATA TCAACAA CGGCAAAAAAATCAC TERM 3681 2760321 - 2760307 - GT 89 -2.8 -5.48303 | opp_overlap 2760308, overlap 2760308 ACAACGGCAAAAAAA TCACTT TTT AAGTGT AATCTGGCAGCTTTA STY2880 2760663 - 2760475 - | hypothetical protein TERM 3682 2760789 - 2760746 - R 76 -8.8 -3.71991 | gap 1, opp_overlap 2760747, overlap 2760777 CAGAAAGCTTAACAA GTCGGC-GTCCGATTACATGG CAA CCAGGTAATCGGTCCGCAGTC GCAAAGCGACAAACT STY2881 2761128 - 2760910 - | putative bacteriophage late gene regulator STY2882 2762319 - 2761219 - | putative bacteriophage late gene regulator STY2883 2762801 - 2762316 - | putative bacteriophage tail protein STY2884 2765875 - 2762798 - | putative bacteriophage tail protein TERM 3683 2765231 - 2765241 + g 70 -3.2 -4.72272 | overlap 2765220 CATGGCATCTTCCAT GCTG GTA TAGC TTTTTACTGCCGCCA TERM 3684 2765524 - 2765534 + g 85 -6.8 -4.88388 | overlap 2765522 GCACAAGCGCCGTCT GCTG CTG CAGC TTTTTCTGGCGTTCT TERM 3685 2765801 - 2765775 - G 72 -11.7 -2.62396 | gap 1 GATTTTTTGACAGCA GCA-GCCAGTTC TCTT GAACTGGCCTGC GCAGATCGAAATGGG TERM 3686 2765848 - 2765861 + g 71 -8.1 -3.82824 | opp_overlap 2765848 CCGCATTAAGAATGA CCTGC AGAC GCAGG TTGTTATCACTCATC STY2885 2765987 - 2765868 - | putative bacteriophage protein TERM 3687 2765989 - 2765969 - G 87 -8.3 -4.65895 | GCGGCCAGTGAAAAA TGGTGGC GATATCT GCCACCA GATCGTCAACCGTCA STY2886 2766304 - 2766002 - | putative phage tail protein STY2887 2766874 - 2766359 - | major tail tube protein STY2888 2768056 - 2766884 - | putative bacteriophage major tail sheath protein STY2889 2768771 - 2768199 - | putative DNA-invertase TERM 3688 2769344 - 2769334 - H 76 -4 -5.08824 | opp_overlap 2769343 TTTTTACGCAAAAAA TCAT CAC ATGA TCAAGGGTCGTATTT iroB 2769449 - 2770564 + | putative glycosyltransferase TERM 3689 2772364 - 2772392 + G 70 -5.2 -4.4017 | overlap 2772366 GCAAGGTGTCCGACG TTTCGCTCGCTG ATGAG CGGCGAGGGGGA TTTTCTCGCCCTTGC iroC 2770645 - 2774301 + | putative ABC transporter protein TERM 3690 2774340 - 2774362 + F 95 -13.5 -3.77831 | opp_overlap 2774332 2774334 2774333 AAAGAAAGCCCGCAA GCGGCTGTT CCTGT AACAGCCGC TTTAGCTATTGATAC iroD 2774411 - 2775655 + | putative ferric enterochelin esterase TERM 3691 2775717 - 2775731 + G 74 -4.2 -4.79667 | overlap 2775713 2775727 TACCACAACAAGTGC TATCGC GTG GCGCTA TTTTTAGTGAGTTTT TERM 3692 2776529 - 2776547 + G 74 -10.2 -3.58731 | overlap 2776531 GCAGCATTACCCGGG CCTGGGCC ACG GGCCCATG TTTAACGCCTCTTTT TERM 3693 2776531 - 2776545 + G 75 -11.4 -3.36341 | overlap 2776529 AGCATTACCCGGGCC TGGGCC ACG GGCCCA TGTTTAACGCCTCTT iroE 2775687 - 2776604 + | hypothetical protein TERM 3694 2776658 - 2776636 - T 100 -17.8 -3.29043 | AACCCGTCGCCAGAA TATGCCCGCC AGC GGCGGGCATA ACCCATCAAAACGAG iroN 2778844 - 2776664 - | outer membrane receptor FepA TERM 3695 2776882 - 2776897 + g 74 -3.2 -4.87291 | overlap 2776875 CTTCACTACGCGACT CCGC ATGTGTTC GCGG TTTTTGCTTGCCGTA TERM 3696 2779345 - 2779309 - g 100 -17.5 -4.07687 | opp_overlap 2779315, overlap 2779311 2779315 ATGTTGGCGCCAAAA TACAAAGCGCCTGGTAA TAA TTATCAGGCGCTTTGCA GACAGAAAACCATCA TERM 3697 2779343 - 2779311 - g 100 -17.9 -3.63744 | opp_overlap 2779315, overlap 2779309 2779315 GTTGGCGCCAAAATA CAAAGCGCCTGGTAA TAA TTATCAGGCGCTTTG CAGACAGAAAACCAT TERM 3698 2779339 - 2779315 - g 100 -12.9 -4.45168 | opp_overlap 2779315, overlap 2779311 2779309 GCGCCAAAATACAAA GCGCCTGGTAA TAA TTATCAGGCGC TTTGCAGACAGAAAA TERM 3699 2779315 - 2779339 + G 95 -15.1 -3.53012 | opp_overlap 2779315 2779311 2779309 GCGCCAAAATACAAA GCGCCTGGTAA TAA TTATCAGGCGC TTTGCAGACAGAAAA STY2895 2779174 - 2779416 + | hypothetical protein TERM 3700 2779798 - 2779819 + T 71 -7.3 -4.10566 | opp_overlap 2779795 2779792 GTAAATAATTAACTC TCAGCTACT ATTC AGTAGCAGA TTGTTATTCTTACAT STY2897 2780918 - 2779866 - | hypothetical protein TERM 3701 2780666 - 2780682 + g 86 -9.5 -4.36914 | CACGACACCCATCCA CATCATC CAG GATGATG TTTTCTGGCAACGGA virK 2781435 - 2782364 + | virulence protein TERM 3702 2783393 - 2783377 - g 74 -3 -4.8622 | TGGTGCAATTAAAAA TGAATG CAGGC CACTCA GTCCCGGCAGCATAC mig-14 2782658 - 2783554 + | putative transcriptional regulator TERM 3703 2783594 - 2783562 - T 100 -9.9 -4.85782 | opp_overlap 2783563, overlap 2783563 TTTGCTAAAAAGAAA GCCTGGACGTAAATA TGT TTTTTACGCCCAGGT TTTTCATAAACCCTG TERM 3704 2783593 - 2783563 - T 90 -13.4 -3.50746 | opp_overlap 2783563, overlap 2783562 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGCCCAGG TTTTTCATAAACCCT TERM 3705 2783563 - 2783593 + T 95 -11.2 -4.7254 | opp_overlap 2783563 2783562 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGCCCAGG TTTTTCATAAACCCT TERM 3706 2784929 - 2784919 - T 83 -2.4 -5.67063 | GCCAGCAGAAAAAAA GCGG AAA CAGC CGTACCAATCAACGA TERM 3707 2785069 - 2785050 - T 89 -4.2 -5.64006 | opp_overlap 2785058 ACCCAATGAAAAAAA CGCCCCCA CGCC TAAAGGCG TTTTACCCTGCTGCA TERM 3708 2785058 - 2785069 + T 71 -7.2 -4.15565 | opp_overlap 2785050 AAAAAAACGCCCCCA CGCC TAAA GGCG TTTTACCCTGCTGCA tctE 2786837 - 2785422 - | putative two-component system sensor kinase TERM 3709 2786049 - 2786059 + g 90 -8.2 -4.68593 | opp_overlap 2786048, overlap 2786027 2786029 CTGCGTTTTTAACAC CGCC AGC GGCG TTTTTAACTGGTGAG tctD 2787498 - 2786824 - | transcriptional regulator TERM 3710 2786891 - 2786901 + g 82 -5.4 -5.02074 | GTAATTCGTACATCG CTTC CCT GAAG TTTTTTACGCAGTCG TERM 3711 2787420 - 2787430 + g 77 -8.2 -4.07687 | CAAATACGCAGTCCA CGGC AAA GCCG TTTTGCACCAGCGCT STY2905 2787537 - 2787656 + | hypothetical protein TERM 3712 2788360 - 2788342 - g 83 -7.3 -4.63527 | opp_overlap 2788341 2788342 CGACGAGTTTAAAAA GCAGCGC GATCT GCGCGGC CTGTTTGAGTTCGAC STY2906 2787653 - 2788462 + | hypothetical protein STY2907 2788477 - 2788908 + | hypothetical protein STY2908 2788919 - 2790433 + | hypothetical protein TERM 3713 2791030 - 2790992 - g 81 -8 -4.25104 | opp_overlap 2791002 2791004, overlap 2791012 2791013 CGCTGTTGATCAAAA CGCTCCTCAACCGTGCAC AAG GCGCGCTGTTGATCAGCG CCGAAGGGATCGATG STY2909 2790736 - 2791713 + | hypothetical protein TERM 3714 2792369 - 2792385 + G 91 -7.2 -4.84311 | CGGCTGGTCAAAATG CTGGGC GTGGA GCCCGG TTTTATTATCTGCCC TERM 3715 2792478 - 2792488 + G 71 -8.2 -3.87815 | ACCCGATCCCCGATC CGGC AAT GCCG TTTCTCGGCGTCCAC ygaF 2791739 - 2793007 + | hypothetical protein TERM 3716 2793226 - 2793193 - g 71 -10.9 -3.16564 | gap 1 GCGCGACGCCATCAA CGC-CGCCAATCGCGC CCT GCCCGCCTGGCGCGCG CTCACCGCCAAAGAG gabD 2793029 - 2794477 + | succinate-semialdehyde dehydrogenase I TERM 3717 2794867 - 2794853 - g 70 -7.1 -4.10855 | overlap 2794842 AAAACGCGGTGAAAA TCGCC CGCGC GGCGA CAAAACGCAGCGGCG gabT 2794492 - 2795775 + | 4-aminobutyrate aminotransferase TERM 3718 2795859 - 2795808 - f 85 -14 -3.06183 | opp_overlap 2795801 CGGATGGCGACGTAA CTGTCTTATCCGGCCTACAA AAACCGTTTCGA TTGTAGGCCGAATAAGCCAG GCACCATCCGGTAAA TERM 3719 2796121 - 2796131 + G 83 -8.2 -4.41633 | overlap 2796118 ATGGCCGTCGCCACA CCGG ATA CCGG TTCTTTTTCCACCTA TERM 3720 2796397 - 2796431 + G 75 -3.5 -4.89852 | gap 1, opp_overlap 2796387 2796383, overlap 2796388 2796387 2796398 GTAATTGCCATTCTG GCGTTTATCG-CGCTG GGCG CGGCGGCGATTAGCGG TTTTTATCCGTATGC gabP 2795905 - 2797305 + | gamma-aminobutyrate transporter TERM 3721 2797830 - 2797844 + G 71 -4.2 -4.57304 | CGCTTATTTGACCTG GCGG CCCGCTA CCGC TTTATTTGGTTACGT TERM 3722 2797984 - 2797963 - g 70 -10.1 -3.37344 | overlap 2797964 GCGCCAGCGAATTAA TGCGTCAGC ATTT GCTGACGCC GATTCCCATTATTCG TERM 3723 2797983 - 2797964 - g 78 -13.6 -2.62192 | overlap 2797963 CGCCAGCGAATTAAT GCGTCAGC ATTT GCTGACGC CGATTCCCATTATTC ygaE 2797347 - 2798024 + | DNA-binding transcriptional regulator CsiR TERM 3724 2798215 - 2798205 - T 72 -5.4 -4.4009 | overlap 2798207 TTTTACGGTATAAAA CTGA CTT TCAG CCGCTGGCGTCGTGG TERM 3725 2798372 - 2798383 + T 85 -7.2 -4.93288 | TCACTTTGTCAGCGT CGGG TATT CCCG TTTTATTTAAATGTT TERM 3726 2798581 - 2798564 - T 90 -14.1 -3.31263 | AGGTTATCCTGATAA GCGGCGC TTAT GCGCCGC CGGTGGCCGGTAATT STY2916 2798753 - 2798595 - | hypothetical protein TERM 3727 2798805 - 2798793 - H 78 -6.3 -4.58395 | GTCATTGTTTAAAAA GAGAT TTT ATCTC TAAGCATAGTCAGTT TERM 3728 2798839 - 2798849 + H 76 -8.2 -4.18094 | overlap 2798838 CTGAGCCTGCCAGTC GCGC GCC GCGC TTTTACCCTCCTTTA TERM 3729 2799068 - 2799051 - g 70 -3.3 -4.72272 | overlap 2799054 GCGGTTCACCAAAAA CCAGCGC AGGC GAACTGG CGCGCATTACCGGGC STY2917 2798936 - 2799235 + | putative transcriptional regulator STY2918 2799245 - 2799772 + | hypothetical protein STY2919 2799906 - 2800031 + | hypothetical protein stpA 2800522 - 2800121 - | DNA binding protein, nucleoid-associated TERM 3730 2800999 - 2800980 - H 71 -3.6 -4.86033 | opp_overlap 2800979 2800980 AAATCGCCAGAAAAA CAATGCAT TATA ATGTATTG ATTTAAAAGTAATTA STY2923 2801221 - 2801670 + | hypothetical protein TERM 3731 2801703 - 2801676 - T 79 -12 -3.2496 | gap 1, opp_overlap 2801678 2801679 2801699, overlap 2801671 TAAGGCATAAGTTAA CGTCGCGACTGGC TTT GCCAGTCGCG-CT TTTAGTCGCTTTTTT TERM 3732 2801678 - 2801702 + T 100 -15.7 -4.35675 | opp_overlap 2801676 2801671, overlap 2801679 2801699 AGGCATAAGTTAACG TCGCGACTGGC TTT GCCAGTCGCGC TTTTAGTCGCTTTTT TERM 3733 2801679 - 2801701 + T 100 -19.2 -3.19778 | opp_overlap 2801676 2801671, overlap 2801678 2801699 GGCATAAGTTAACGT CGCGACTGGC TTT GCCAGTCGCG CTTTTAGTCGCTTTT TERM 3734 2801699 - 2801712 + T 75 -3.1 -5.14563 | gap 1, opp_overlap 2801676 2801671, overlap 2801679 2801678 CTGGCTTTGCCAGTC GCG-CT TTT AGTCGC TTTTTTCGTCGCCAA ygaC 2802055 - 2801705 - | hypothetical protein STY2925 2802217 - 2802543 + | hypothetical protein STY2928 2804050 - 2804481 + | hypothetical protein STY2929 2804478 - 2804654 + | hypothetical protein TERM 3735 2804704 - 2804723 + F 78 -6.3 -4.67635 | opp_overlap 2804694 2804703 CAACACACGACAATC CGACGCG TTTCAT CGCGCCG TTTTCTCATTTTAAA nrdH 2804753 - 2804998 + | glutaredoxin-like protein TERM 3736 2805149 - 2805186 + GF 70 -3.4 -4.68593 | overlap 2805152 CGTCATACGGCGGCG GCGGGATGGCCGGT-GCG GTGC CGCGACAGGTGATCC-GC TTTTTAAATGATGAA nrdI 2804995 - 2805405 + | ribonucleotide reductase stimulatory protein TERM 3737 2805984 - 2806001 + GF 76 -4.7 -4.80882 | opp_overlap 2805984 2805985, overlap 2805985 CTGCAACTCTCCAAA CGCGGCG GCGG CGTCGCA TTTTTACTCTCCAAT TERM 3738 2806258 - 2806219 - gf 79 -2.9 -5.14965 | gap 1 ATGCCGACGAAAAAA TCC-GGATCAAAACGC TCTCTCTCG GCGTGGTGATCCCGGA CATCACCTTCCGGCT TERM 3739 2806300 - 2806286 - gf 74 -2.7 -4.86731 | opp_overlap 2806287, overlap 2806287 2806295 GCTGGCGAAAGAAAA CGCGC AAATG GCGCT CTTTTCGCCCTATGA nrdE 2805378 - 2807522 + | ribonucleotide-diphosphate reductase subunit alpha TERM 3740 2808170 - 2808203 + G 84 -8.9 -4.2461 | opp_overlap 2808174 AAAAACTATCGGCAA TCGAGCGTGAAGAGT TAAA GCTTTTCGCGCTGGA TTTATTGATGGAACT nrdF 2807533 - 2808492 + | ribonucleotide-diphosphate reductase subunit beta TERM 3741 2808500 - 2808531 + F 90 -9.6 -4.41616 | ATTTTTAACCTTGCG GGCATGGGAAAT AACGTTAC ATTTTCCATGCC TTTATTTCAAGCAAT TERM 3742 2808605 - 2808633 + F 93 -9 -4.8269 | opp_overlap 2808596 2808605, overlap 2808607 ATACGAGTGACATTA TTCACCTGGATT CCTCC AATTCAGGTGGA TTTTTGCTGGTTGTC proW 2810041 - 2811105 + | glycine betaine transporter membrane protein TERM 3743 2811552 - 2811542 - g 93 -4.6 -5.64274 | TGATCGATAAAAAAA CCGC CGA GCAG TACAACATCACTAAT proX 2811175 - 2812170 + | glycine betaine transporter periplasmic subunit TERM 3744 2812209 - 2812193 - f 70 -9.4 -3.30124 | TTTTATGCCGGATAA GGCGCA GTTCA TGCGCC GCTATCCGGCCAACG TERM 3745 2813095 - 2813116 + G 71 -10.1 -3.53444 | gap 1, overlap 2813094 TGATTGGCCTGTTTG GC-CTGGCGG GGG CCGCCGGCGC TTTAGGCGCGCGTCC TERM 3746 2813420 - 2813436 + G 85 -11.5 -4.0371 | opp_overlap 2813420, overlap 2813421 CTCCGCCTGGCAACA TGCCGGC TGG GCCGGCG TTTGTCTGGCGGGTG TERM 3747 2813421 - 2813435 + G 81 -12.8 -3.01905 | opp_overlap 2813420, overlap 2813420 TCCGCCTGGCAACAT GCCGGC TGG GCCGGC GTTTGTCTGGCGGGT STY2938 2812335 - 2813519 + | putative transmembrane transport protein TERM 3748 2814076 - 2814097 + G 71 -5.9 -4.24326 | opp_overlap 2814076, overlap 2814068 2814079 GCCAGCCGTCACGAA GACTTTCCT TACC AGGAAATTC TTTTGACTCGTCTTT TERM 3749 2814079 - 2814094 + G 71 -6.2 -4.22883 | opp_overlap 2814076, overlap 2814076 2814068 AGCCGTCACGAAGAC TTTCCT TACC AGGAAA TTCTTTTGACTCGTC emrR 2814016 - 2814546 + | transcriptional repressor MprA TERM 3750 2814594 - 2814617 + F 71 -7.4 -3.85817 | opp_overlap 2814588 ACAGGAAAGCGGACA GGCCGGCA CGCGTTAC TGCTGGCC TTTCTGACAACAGGT TERM 3751 2814704 - 2814684 - g 74 -9.7 -3.63782 | CAACATGAGCGCAAA TGCGGAGAT CCA ACCCCCGCA GCAACCGGCTAAGAA TERM 3752 2815010 - 2814989 - g 74 -6.5 -4.323 | gap 1, opp_overlap 2815002, overlap 2814982 2814980 2814990 2814991 TTGAAAGAGCCAAAA CG-GCGCTGG CCT CCAGCGTGCG CCAGACGCACCAGTT TERM 3753 2815097 - 2815073 - g 84 -6.4 -5.03314 | gap 1, overlap 2815074 TCGACGTGCAAAAAA CCGCCCTGGCG CAAG CGC-AGAGCGA CCTTAACCGTCGTGT emrA 2814673 - 2815845 + | multidrug resistance protein A TERM 3754 2816620 - 2816645 + G 83 -7.6 -4.56791 | opp_overlap 2816622, overlap 2816613 2816623 GATCGTCTGGGAACT GACCGACGAT CACCCT ATCGTCGATC TTTCTCTTTTTAAAT emrB 2815862 - 2817400 + | multidrug resistance protein B TERM 3755 2817414 - 2817429 + T 100 -9 -5.14563 | opp_overlap 2817414 AACTATCTGATAAAA GGGATC TACG GATCCC TTTTTTAGTAGACCA TERM 3756 2817429 - 2817414 - T 86 -9 -4.41206 | opp_overlap 2817414 AACTATCTGATAAAA GGGATC TACG GATCCC TTTTTTAGTAGACCA STY2942 2818819 - 2817449 - | putative glycoporin TERM 3757 2817988 - 2817960 - G 73 -5.4 -4.56775 | gap 2 ATCGCCGTTGAAAAA CGCCC-GTT-TTGC CAG GCAATAACCGGACG GACGTAAGCCACGTT TERM 3758 2819112 - 2819130 + r 72 -8.8 -3.55122 | opp_overlap 2819112, overlap 2819108 TTAAGCAATAAAAAA CCCCGG CCATAAA CCGGGG TTAATTTAAATACTG TERM 3759 2819130 - 2819112 - R 100 -10.2 -5.5604 | opp_overlap 2819112 2819108 TTAAGCAATAAAAAA CCCCGGCC ATA AACCGGGG TTAATTTAAATACTG luxS 2819680 - 2819165 - | S-ribosylhomocysteinase TERM 3760 2819433 - 2819423 - G 77 -8.2 -4.18494 | overlap 2819410 2819424 CAGGCTCATGTAAAA GCCG GTG CGGC AGCCCATCGGCGAGA TERM 3761 2819578 - 2819610 + g 71 -4.7 -4.56597 | opp_overlap 2819576 AACGCAGATCAAACA CGGTGATTGCGTCGC CAT GCGGGGTGTTCATCG TTTTTGCACCCCGGA TERM 3762 2819798 - 2819816 + r 100 -14.6 -5.48213 | opp_overlap 2819795 CAGCGATGAAATTTT GGCCACTC CGT GAGTGGCC TTTTTCTTTTGGGTC gshA 2821386 - 2819830 - | glutamate--cysteine ligase STY2945 2821888 - 2821463 - | hypothetical protein STY2946 2822451 - 2821885 - | fructose-1-phosphatase TERM 3763 2822391 - 2822364 - G 74 -7.6 -4.09243 | gap 1, opp_overlap 2822365, overlap 2822365 CATAGCGCCCCAAAA CCTCACGCCACGC TTT GCGATGCGTG-GG TTCGGTATCCAGGAG TERM 3764 2822601 - 2822616 + r 72 -9 -3.57783 | overlap 2822589 ACTCGCCCTTCGGGC CGTTGC TGAT GCAACG TTATCCTTCTGATGC TERM 3765 2822717 - 2822735 + r 71 -9.5 -3.14211 | overlap 2822734 GGATTACTCGCCTTA CGGCTCG CCCTT CGGGCCG TTGCTGACGCAACGT TERM 3766 2822734 - 2822749 + r 72 -9 -3.54743 | overlap 2822717 2822740 GCTCGCCCTTCGGGC CGTTGC TGAC GCAACG TTATCCTTCCTGGTG TERM 3767 2822990 - 2823008 + r 71 -9.5 -3.14211 | overlap 2823007 GGATTACTCGCCTTA CGGCTCG CCCTT CGGGCCG TTGCTAACGCAACGT TERM 3768 2823007 - 2823022 + r 72 -9 -3.54743 | overlap 2822990 2823013 GCTCGCCCTTCGGGC CGTTGC TAAC GCAACG TTATCCTTCCTGGTG csrA 2824035 - 2823850 - | carbon storage regulator TERM 3769 2824218 - 2824263 + r 72 -9 -3.61089 | gap 2, opp_overlap 2824231 TTATCGTTGTCGATA GCGTTGACGTAAACGCCGCAGC ACGA GCTGCGGCGCCAACG--AACGC TTATAATTATTGCAA TERM 3770 2824252 - 2824231 - R 100 -17.3 -3.6502 | opp_overlap 2824218 TAGCGTTGACGTAAA CGCCGCAGC ACGA GCTGCGGCG CCAACGAACGCTTAT alaS 2826900 - 2824270 - | alanyl-tRNA synthetase recX 2827636 - 2827136 - | recombination regulator RecX TERM 3771 2827686 - 2827667 - R 91 -11.4 -4.24002 | opp_overlap 2827667 2827658 GGGTAAATGCCAAAA GGGCCGCA TAAA TGCAGCCC TTGATGGTAATTTAA recA 2828814 - 2827753 - | recombinase A ygaD 2829396 - 2828899 - | competence damage-inducible protein A TERM 3772 2829853 - 2829829 - R 77 -10.8 -3.3287 | gap 1, opp_overlap 2829830, overlap 2829819 AAAAAGCCATAGTAA TAGCGGAGGGG GGCT CCCCTCC-CTA AGCGTAAATTAGCGC mltB 2830941 - 2829862 - | murein hydrolase B srlA 2831196 - 2831759 + | PTS system, glucitol/sorbitol-specific IIBC component TERM 3773 2831934 - 2831924 - g 71 -8.2 -3.9122 | overlap 2831925 GACGGCTTTAAAGAA GGCG AAC CGCC GGAAGCGGAGATCGG srlE 2831756 - 2832727 + | PTS system, glucitol/sorbitol-specific IIBC component srlB 2832739 - 2833101 + | glucitol/sorbitol-specific PTS system component IIA srlD 2833113 - 2833892 + | sorbitol-6-phosphate dehydrogenase srlM 2833969 - 2834328 + | DNA-binding transcriptional activator GutM STY2958 2834395 - 2834508 + | hypothetical protein TERM 3774 2834774 - 2834761 - g 84 -3.1 -5.30686 | gap 1, overlap 2834763 AACACCCACAAAAAA GC-GCT GAT AGCCGC AGCCGCTGTGAAATA srlR 2834527 - 2835300 + | DNA-bindng transcriptional repressor SrlR gutQ 2835293 - 2836258 + | D-arabinose 5-phosphate isomerase ygaA 2837775 - 2836255 - | anaerobic nitric oxide reductase transcription regulator TERM 3775 2837877 - 2837855 - H 71 -3.6 -4.82667 | TGACTATACCAAAAA TACAAAATTA TTA TAATTTCATA TAAATCAATAAGATG TERM 3776 2838060 - 2838046 - g 86 -7.8 -4.68724 | overlap 2838047 GCACTGAATACAAAA CGCTGC GTG GCAGCA GCTATAACAGCTATC TERM 3777 2838351 - 2838337 - g 70 -7 -4.09739 | TTAAGGTGGTGAAAA CCGGCG ATA CGCTGG ATATCGGCGACGGCA STY2962 2837961 - 2839400 + | anaerobic nitric oxide reductase flavorubredoxin TERM 3778 2839825 - 2839805 - g 71 -11.1 -2.87132 | opp_overlap 2839802 2839798 2839805, overlap 2839808 CGCGCCTGTGAGACA CCACTGCGC GAC GCGCAGCGA GTGCTGATTGTCGGC STY2963 2839397 - 2840530 + | nitric oxide reductase hypf 2842867 - 2840627 - | hydrogenase maturation protein TERM 3779 2840888 - 2840868 - G 71 -6 -4.30844 | overlap 2840870 AGCGCATCATGAAAA GCCCAGGC GCGTT GCGCGGGC GTGGCCTGCCAGTTC TERM 3780 2841070 - 2841034 - G 76 -12.3 -3.12351 | gap 1, overlap 2841055 CGCCCTCATAGCTAA GCGAT-GCTGGCGCGC AGCGAA GCGCGGCAGCCACCGC GTCAAACAACCGCCC TERM 3781 2841214 - 2841200 - G 82 -11.4 -3.86346 | CCAGTCCGGCACAAA GCGCAG GCA CTGCGC TAACAGATTACGCCA TERM 3782 2842370 - 2842350 - G 74 -6.8 -4.25104 | opp_overlap 2842350 2842348 GGCTGGGCATGAAAA CGGCGATC GTACG GATCGCGG TATTCGCTGTCGCAT hydN 2843558 - 2843013 - | electron transport protein HydN TERM 3783 2843043 - 2843057 + g 87 -8.5 -4.58395 | opp_overlap 2843024 2843042 TGCCGTTGAATCCAG CGCCG CACGA CGGCG TTTTTCCGCGCTCAG TERM 3784 2843665 - 2843694 + r 90 -15.1 -2.62616 | opp_overlap 2843681, overlap 2843653 TTTCGTGAGCATTTA CGTGTCATCGTCA CAAG TGTCGATGACACG TAATGTCGCCAGTGG STY2966 2844538 - 2843759 - | hypothetical protein hycI 2845065 - 2844595 - | hydrogenase 3 maturation protease hycH 2845468 - 2845058 - | formate hydrogenlyase maturation protein TERM 3785 2845113 - 2845141 + g 70 -8.9 -3.75024 | opp_overlap 2845122, overlap 2845122 TCCTGATGAATGTCA TGCAGCATACTGA GCA TCAGTTTGCTCCA TTCTTGCTGCTGCGG TERM 3786 2845161 - 2845197 + g 71 -10.1 -3.59315 | gap 1, overlap 2845164 TGCTGCTGCGGGGTC TGCGCGGCGCGCGCCT CATCAA ACGCGCGCGCCA-GCA TTTGCACATGGTTGA TERM 3787 2845164 - 2845196 + g 76 -12.7 -2.75268 | gap 1, overlap 2845161 TGCTGCGGGGTCTGC GC-GGCGCGCGCCT CATCAA ACGCGCGCGCCAGC ATTTGCACATGGTTG hycG 2846232 - 2845465 - | formate hydrogenlyase subunit 7 hycF 2846774 - 2846232 - | formate hydrogenlyase complex iron-sulfur subunit TERM 3788 2846343 - 2846386 + g 73 -10.4 -3.38294 | gap 1, overlap 2846341 2846339 GCGGTGGTTTTCTGC TCGGCTGTCGCCGTTGTGC GCAAGCA GCGCAATGGCG-TAGTCGA TCTCTTTCTGTACCG hycE 2848493 - 2846784 - | formate hydrogenlyase subunit 5 hycD 2849434 - 2848511 - | formate hydrogenlyase subunit 4 TERM 3789 2849266 - 2849248 - G 71 -4.5 -4.62069 | gap 1, overlap 2849249 GCGTCAGGCGAAAAA CCCAGCCG GAAT CAGC-GGG CGCAATACTCTGACG hycC 2851263 - 2849437 - | formate hydrogenlyase subunit 3 TERM 3790 2849509 - 2849521 + g 71 -10.5 -3.28712 | opp_overlap 2849505 2849503 ACGACGGAACAGCCC CGCGG CCG CCGCG TTCTGCCAGCCCGGC TERM 3791 2850856 - 2850838 - G 80 -12.4 -3.33815 | opp_overlap 2850838 2850837 2850840 ACCGCCGGTAAGGAA CACGGCGC AGA GCGCCATG ATTTCAGCCATCACC TERM 3792 2851213 - 2851201 - G 75 -6.9 -4.52214 | overlap 2851209 AAACGAAAACAGAAA CGCCA GAA CGGCG GCGGCGGCAAACCAC TERM 3793 2851237 - 2851209 - G 73 -10.2 -3.41528 | gap 1, overlap 2851201 ACAGAAACGCCAGAA CGGCGGCG-GCGG CAAA CCACGCGACGCCG CTAGTAATCAGTGAA hycB 2851871 - 2851263 - | formate hydrogenlyase subunit 2 TERM 3794 2851722 - 2851739 + g 74 -2.7 -4.86621 | gap 1, opp_overlap 2851724, overlap 2851724 2851725 TTCACAGTGGTGACA GAG-CTGC GGC GCAGATTC TTTTTCATTCAGCAT TERM 3795 2851993 - 2851963 - R 72 -9 -3.65542 | overlap 2851961 2851972 CCCATCCCCAAAACA TTCATGACATGGCG CAA CGCCACATCGCGAA TCAAAGCGGGCAACG hycA 2852478 - 2852017 - | formate hydrogenlyase regulatory protein HycA hypA 2852688 - 2853044 + | hydrogenase nickel incorporation protein TERM 3796 2853077 - 2853045 - f 79 -11.4 -3.40601 | gap 1 GAAACTGAAGATTAA TGCCGGATAA-GACG CTCG CGTCGCCATCCGGCA GAAAGCCTGTAACAA hypB 2853114 - 2853986 + | hydrogenase nickel incorporation protein HypB hypC 2853977 - 2854249 + | hydrogenase isoenzymes formation protein TERM 3797 2854367 - 2854390 + G 86 -7.4 -4.82855 | gap 1, opp_overlap 2854366, overlap 2854369 2854370 TGCGCATTATGGAAG TCTGCGGGGGT CAT ACCCACGC-GA TTTTTAAATTTGGTC TERM 3798 2855144 - 2855116 - g 91 -14.6 -3.05384 | opp_overlap 2855107 CTGGGCGTGATTGAA TCCTCCGGCGTC CACCT GACGCCGGAGTA TCAGCGCTTTGACGC hypD 2854249 - 2855370 + | hydrogenase isoenzyme formation protein HypD TERM 3799 2855506 - 2855528 + G 70 -5.4 -4.38712 | opp_overlap 2855506 AGCTGGCGCAACTGA CGGCGGAGGG CGA CCGTCTGGCG TTTTCTACCGATAGC hypE 2855409 - 2856377 + | hydrogenase isoenzyme formation protein HypE fhlA 2856596 - 2858674 + | transcriptional activator of the formate hydrogenlyase system ygbA 2859080 - 2858736 - | hypothetical protein TERM 3800 2858878 - 2858918 + g 95 -9.6 -4.72272 | opp_overlap 2858892, overlap 2858879 ATCTCCTCGCGTTTA GCCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGGG TTTTTCCTCGCCAAA TERM 3801 2858879 - 2858917 + g 84 -13.1 -3.43042 | opp_overlap 2858892, overlap 2858878 TCTCCTCGCGTTTAG CCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGG GTTTTTCCTCGCCAA TERM 3802 2859846 - 2859812 - g 74 -2.1 -5.03314 | gap 1 CCGAGCTGGAAAAAA TTC-CCGCCGATCAGC GCTG GCTGGTCACCAGTGAA GGCGCGTTCTCTTAC sitA 2859262 - 2860179 + | Iron transport protein, periplasmic-binding protein sitB 2860176 - 2860997 + | Iron transport protein, ATP-binding component sitC 2860994 - 2861854 + | Iron transport protein, inner membrane component sitD 2861845 - 2862693 + | Iron transport protein, inner membrane component STY2986a 2862665 - 2862874 + | hypothetical protein sprB 2863725 - 2862970 - | AraC family transcription regulator TERM 3803 2863145 - 2863161 + g 77 -3.7 -5.03145 | TAAATACTGACGGTT TTTGTTC CCA GACCAAA TTTTTTCGCCAGTTC sprA 2864997 - 2864110 - | AraC family transcription regulator STY2989 2865795 - 2865343 - | hypothetical protein TERM 3804 2865407 - 2865384 - G 71 -6 -4.36914 | opp_overlap 2865384 2865387, overlap 2865388 CCCCGCCCGATAAAA TAATCTCCTG CATC CAGGAGGTCA TTTGTGACTGTGCAT orgAb 2866482 - 2865811 - | cell invasion protein orgAa 2867017 - 2866439 - | cell invasion protein TERM 3805 2866802 - 2866831 + gr 100 -16.5 -3.11073 | overlap 2866802 2866805 TTGCGGCAGTCGGCG CCACTGACGCAGC CACA GCTGCGTCAGTGA GTTTTGAATACACTC TERM 3806 2866802 - 2866832 + gr 100 -16.3 -4.1899 | gap 1, overlap 2866802 2866805 TTGCGGCAGTCGGCG C-CACTGACGCAGC CACA GCTGCGTCAGTGAG TTTTGAATACACTCC TERM 3807 2866805 - 2866828 + gr 100 -16.8 -2.76404 | overlap 2866802 2866802 CGGCAGTCGGCGCCA CTGACGCAGC CACA GCTGCGTCAG TGAGTTTTGAATACA prgK 2867768 - 2867010 - | pathogenicity 1 island effector protein TERM 3808 2867042 - 2867073 + g 77 -4.5 -4.91109 | opp_overlap 2867071 TCGCCTTATCATCAG CCGTTATGCCT TTCTTATTGC GGGCATAATGG TTTTTGTAATACCAG prgJ 2868070 - 2867765 - | pathogenicity 1 island effector protein prgI 2868331 - 2868089 - | pathogenicity 1 island effector protein prgH 2869534 - 2868356 - | pathogenicity 1 island effector protein STY2996 2869850 - 2870779 + | AraC family transcription regulator TERM 3809 2871049 - 2871081 + F 100 -11.3 -4.81163 | overlap 2871051 GATGACACTATCTCC TTCCGGCTTTAACCC TAT GGATTAAGGCCGGCA TTTTATTCATATTTA TERM 3810 2871051 - 2871079 + F 83 -13.9 -2.66616 | overlap 2871049 TGACACTATCTCCTT CCGGCTTTAACCC TAT GGATTAAGGCCGG CATTTTATTCATATT iagA 2871866 - 2873527 + | invasion protein regulator iagB 2873545 - 2874027 + | cell invasion protein TERM 3811 2874037 - 2874074 + T 100 -10.1 -4.87786 | opp_overlap 2874028 2874039, overlap 2874039 AAATAATTATACAGG AATAGCTTACTTTCAGA TAAT TCTAAAAGTAAGCTATG TTTTTATCAGCTTGC TERM 3812 2874039 - 2874072 + T 95 -12.7 -4.05669 | opp_overlap 2874028 2874039, overlap 2874037 ATAATTATACAGGAA TAGCTTACTTTCAGA TAAT TCTAAAAGTAAGCTA TGTTTTTATCAGCTT TERM 3813 2874072 - 2874039 - T 93 -14.9 -3.3568 | opp_overlap 2874039 2874037, overlap 2874028 ATAATTATACAGGAA TAGCTTACTTTCAGA TAAT TCTAAAAGTAAGCTA TGTTTTTATCAGCTT stpA 2875712 - 2874081 - | tyrosine phosphatase (associated with virulence) TERM 3814 2874802 - 2874839 + g 79 -3.3 -5.18371 | gap 1 CGTGCCAGGCCCAGT GTCGGTCCGCTCATCGTC TGT GGCATTGA-CGCACCGGC TTTTATTTTCTCAAG sicP 2876049 - 2875699 - | chaperone (associated with virulence) STY3003 2876378 - 2876118 - | hypothetical protein sipF 2876670 - 2876422 - | acyl carrier protein sipA 2878746 - 2876689 - | pathogenicity island 1 effector protein (function unknown) TERM 3815 2877124 - 2877112 - G 78 -6.2 -4.7173 | TATCACACCCAAAAA CGCC TCACG GGCG TTGAAATGTATTGAA TERM 3816 2877881 - 2877891 + g 76 -3.2 -5.0133 | TTGATATTAATACCC GTAG GTT CTGC TTTTTTCCCACCATC sipD 2879787 - 2878765 - | pathogenicity island 1 effector protein TERM 3817 2879847 - 2879792 - R 77 -10.4 -3.34806 | gap 1, opp_overlap 2879796 2879801, overlap 2879790 ATATTAAGCATAATA TCCCCAGTTCGCCATCAGGAGGGCGAT TAA ATC-CCCCCCTGATGGCGTATAGTTGA TCTGTCAGATTAAGC TERM 3818 2879796 - 2879843 + r 90 -14.2 -3.32765 | gap 1, opp_overlap 2879792 2879790, overlap 2879801 TAAGCATAATATCCC CAGTTCGCCATCAGGAGGGCGAT TAA ATCCCCC-CCTGATGGCGTATAG TTGATCTGTCAGATT TERM 3819 2879801 - 2879838 + r 100 -19.3 -2.96235 | gap 1, opp_overlap 2879792 2879790, overlap 2879796 ATAATATCCCCAGTT CGCCATCAGGAGGGCGAT TAA ATCCCCC-CCTGATGGCG TATAGTTGATCTGTC sipC 2881086 - 2879857 - | pathogenicity island 1 effector protein TERM 3820 2880841 - 2880861 + g 70 -6.9 -4.07687 | CAAATCCTGATTCAT GTCGGTATT TTG AATACTGGC TTTTAAAAAGGACGT sipB 2882895 - 2881114 - | pathogenicity island 1 effector protein TERM 3821 2881156 - 2881142 - G 74 -4.2 -4.77165 | opp_overlap 2881143, overlap 2881143 TGGCGCAGAATAAAA CGCGAA GCA TCCGCA TTTTGCTGTACCGCA TERM 3822 2881304 - 2881286 - G 70 -5.2 -4.46212 | opp_overlap 2881288 2881289, overlap 2881287 2881289 2881294 CGGGCGAGCATAAAA TCAGCAAG CGC CTCGCTGG CATTTTTAATAAATA TERM 3823 2881288 - 2881306 + g 74 -4.4 -4.7497 | opp_overlap 2881287 2881286 2881289 2881294, overlap 2881289 GGCGAGCATAAAATC AGCAAGCG CCT CGCTGGCA TTTTTAATAAATACC TERM 3824 2881912 - 2881896 - G 73 -5.1 -4.59773 | overlap 2881908 CCCCACCGGTAAAAA CAGCG GCCACAA CGCTG ACAATGGTTAGCAGC TERM 3825 2882437 - 2882449 + g 81 -6.9 -4.77438 | GTCATAAACACTCTT GGCGG TAT CCGTC TTTTTGATGCTGGCT TERM 3826 2882845 - 2882828 - G 74 -7.7 -4.09739 | gap 1, opp_overlap 2882834, overlap 2882817 2882829 CGAACGCCTTCAAAA GCCGCCTC AGC GAGGCG-C GGATTTTGGGTATAT spaT 2883395 - 2882898 - | hypothetical protein spaS 2884603 - 2883533 - | surface presentation of antigens protein SpaS spaR 2885381 - 2884590 - | secretory protein (associated with virulence) TERM 3827 2884711 - 2884723 + g 71 -4.7 -4.62783 | opp_overlap 2884712, overlap 2884712 AGCAGCATAATTAAA ACGGC AAT GCCGC TTTTTACCGTCAGTG TERM 3828 2884722 - 2884712 - G 83 -8.2 -4.51174 | opp_overlap 2884711 2884712 GCAGCATAATTAAAA CGGC AAT GCCG CTTTTTACCGTCAGT TERM 3829 2885200 - 2885190 - G 72 -2.4 -4.87665 | CGCCACCGATAAAAA CGGC GGC GCCT CGTTCAATGCATGCG TERM 3830 2885319 - 2885306 - G 95 -3.1 -5.84381 | gap 1 GCAGGAAGAAAAAAA TCGGCG CTA CGC-GA GCAAACCCTAGTGCC spaQ 2885645 - 2885385 - | secretory protein (associated with virulence) TERM 3831 2885596 - 2885544 - G 79 -11.4 -3.61715 | gap 1, overlap 2885545 TACCGTCTGGAATAA CCCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGGA TCAAAACAAGATAGA TERM 3832 2885595 - 2885545 - G 76 -12.7 -2.76815 | gap 1, overlap 2885544 ACCGTCTGGAATAAC CCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGG ATCAAAACAAGATAG spaP 2886345 - 2885671 - | surface presentation of antigens protein SpaP spaO 2887246 - 2886335 - | surface presentation of antigens protein SpaO TERM 3833 2886711 - 2886697 - G 71 -5.7 -4.24342 | TCGCGTAGCAATAAA CTTCC GCACG GGAAG TACGAATCAGGAGTA spaN 2888256 - 2887246 - | surface presentation of antigens protein (associated with type III secretion and virulence) TERM 3834 2887723 - 2887740 + g 74 -6.9 -4.30719 | opp_overlap 2887722 GCCCTCTTTACGAAC GCCTTCG CCCG CGATGGC TTTATTATCCCCAGG TERM 3835 2888074 - 2888084 + g 71 -4.6 -4.59089 | TGCCGCCAGTAATAC CGGT AAA GCCG TTTCTTTATGCATTA spaM 2888699 - 2888256 - | secretory protein (associated with virulence) spaI 2889972 - 2888677 - | ATP synthase SpaL TERM 3836 2889262 - 2889237 - G 72 -2.4 -4.91712 | overlap 2889238 TGGAATCGATAAAAA GCACGACCCG TTTTCC CTGGTCGCGA AAATATTCCGCTACG TERM 3837 2889903 - 2889923 + g 86 -7.5 -4.73105 | CCACATCGCGCAATT CCGCCTCAA TAA TTGGGCCGG TTATTTTTTGTGGGT spak 2890376 - 2889969 - | secretory protein (associated with virulence) TERM 3838 2890129 - 2890113 - G 78 -12.3 -3.21099 | CTCCCCCAGTAGTAA TTGCCCG CCG CGGGCAA AATGGCATCCTTCCA invA 2892457 - 2890400 - | secretory protein (associated with virulence) TERM 3839 2892056 - 2892032 - G 73 -5.5 -4.55689 | opp_overlap 2892033, overlap 2892033 ACCATCCAGAGAAAA TCGGGCCGCGA CTT CCGCGACGCGT TCTGAACCTTTGGTA invE 2893600 - 2892482 - | cell invasion protein invG 2895285 - 2893597 - | secretory protein (associated with virulence) invF 2895932 - 2895282 - | AraC family transcription regulator TERM 3840 2895842 - 2895830 - G 73 -5.5 -4.59853 | overlap 2895831 TTAACGGTCGAAAAA CCAGG TCT CCTGA TACTGGTGCGACAAC TERM 3841 2895884 - 2895900 + g 78 -6.5 -4.53034 | opp_overlap 2895857 AAAAAAGCAGCGCGC CTTCCTG AAT CAGGCAG TTTTCATTGTGTCGG TERM 3842 2895981 - 2895993 + H 76 -9.1 -3.66438 | overlap 2895973 CCATGCTTCCGGGCT GCGGA TTT TCCGC TTCTCTCCTTCTTTA TERM 3843 2896763 - 2896751 - g 79 -3.4 -5.16572 | opp_overlap 2896739 ACCGAATTTAAAAAA GTTC TACTT GAAC CCGGAAGTAAGAATT invH 2896388 - 2896831 + | cell adherance/invasion protein TERM 3844 2896983 - 2897001 + F 87 -10.3 -4.19311 | opp_overlap 2896970 2896985, overlap 2896985 ATCTGCTTTTTGATA CAGCAGC ACCTC GCTGCTG CTTTTTTTATTTGTG TERM 3845 2896985 - 2897002 + F 100 -7 -6.02919 | opp_overlap 2896970 2896985, overlap 2896983 CTGCTTTTTGATACA GCAGCA CCTCGC TGCTGC TTTTTTTATTTGTGA STY3026 2897705 - 2897995 + | hypothetical protein TERM 3846 2898060 - 2898032 - g 90 -10.4 -4.2349 | CCGCGATAGGGAAAA CCCACAATCGAA TGAAT TTTGATTGTGGG GATGCCGATCTGAAC STY3027 2897992 - 2898519 + | hypothetical protein TERM 3847 2899867 - 2899877 + G 89 -3.2 -5.44119 | overlap 2899865 GGTTCTTTCTGTTCA GGCA ATC TGTC TTTTTTTAAAATAAA STY3030 2899240 - 2899896 + | serine/threonine-specific protein phosphatase 2 STY3031 2900251 - 2900066 - | hypothetical protein STY3032 2900586 - 2900260 - | hypothetical protein TERM 3848 2901954 - 2901939 - g 90 -4.6 -5.40072 | overlap 2901941 CGTTGCGTAAAAAAA TGGGCG ATTT CGCCGA ACTGCGCGACCTCCT mutS 2900744 - 2903311 + | DNA mismatch repair protein TERM 3849 2903352 - 2903313 - T 100 -21.6 -3.5394 | gap 1, opp_overlap 2903305 2903305 AAAGTCTGGTGTAAA CGTGTCAGACCCGATAGCG CCG CGCTATCGGGTCTG-CGCG CCGGAACAGGCTTTT STY3034 2903663 - 2903367 - | hypothetical protein TERM 3850 2903597 - 2903587 - G 95 -8.2 -5.00616 | TGCGCCTGGAAAAAA GCGC CCA GCGC CGGATAATCCAGACA STY3036 2904954 - 2903746 - | membrane transporter TERM 3851 2903890 - 2903877 - G 71 -9.5 -3.551 | opp_overlap 2903877, overlap 2903863 CCTCAAGCGACATAA CGCGC TGGA GCGCG TTTAACAGCAGCGTC TERM 3852 2903877 - 2903890 + g 71 -9.5 -3.53224 | opp_overlap 2903863 2903877 CCTCAAGCGACATAA CGCGC TGGA GCGCG TTTAACAGCAGCGTC TERM 3853 2904882 - 2904872 - G 74 -6.8 -4.27617 | GACATCGCAGGAAAA GCCA CGC TGGC AATAAACAGATTAAT TERM 3854 2905050 - 2905026 - H 82 -13.1 -2.90075 | overlap 2905028 CGCGCTTCAACGATA TACTGTCAAAA TAA TTTTGACAGTA AAGGAGCTCGCCATG TERM 3855 2905048 - 2905028 - H 75 -11.3 -3.00298 | overlap 2905026 CGCTTCAACGATATA CTGTCAAAA TAA TTTTGACAG TAAAGGAGCTCGCCA STY3037 2905042 - 2905974 + | LysR family transcriptional regulator STY3038 2907512 - 2906016 - | permease TERM 3856 2907423 - 2907389 - G 81 -12.9 -3.02144 | gap 1, overlap 2907391 CCATTCCCCCCAACA GACCGGCGATGCAGGC CGCC GCCAGCATCGC-GATC AGCGCATGAACACGG STY3039 2908459 - 2907509 - | hypothetical protein hyi 2909275 - 2908499 - | hypothetical protein TERM 3857 2909076 - 2909020 - G 71 -12 -2.52023 | gap 1, opp_overlap 2909020, overlap 2909017 2909019 GAGCCAGATCAATAT CGGCGCGCGCGTCGTGTTCGCGCCCCG GTAG CGCGGCACGTCCCC-ACTCGCCCGCCG CGGTATCACCCGCCG STY3041 2909918 - 2909280 - | putative aldolase TERM 3858 2909457 - 2909442 - G 78 -6 -4.75372 | ATTAGCCAGTAAAAA GGCCTG ATGC CGGGCC GCCAGCGCAGCCAAA TERM 3859 2911303 - 2911317 + H 75 -2.9 -5.24129 | opp_overlap 2911303 2911306 TTGTTTCACAAAAAA TAACA AAATA TGTTA TTTTTTGTGAAGGCA TERM 3860 2911317 - 2911303 - H 75 -2.9 -5.24129 | opp_overlap 2911303, overlap 2911306 TTGTTTCACAAAAAA TAACA AAATA TGTTA TTTTTTGTGAAGGCA STY3044 2911407 - 2912171 + | DeoR family transcriptional regulator TERM 3861 2912176 - 2912189 + T 70 -9.5 -3.11459 | opp_overlap 2912172 2912171 2912169 2912176 CCAAACAATAGCGAA GCGGC GCAA GCCGC TTACGTCATCATCTT TERM 3862 2912189 - 2912176 - T 71 -9.5 -3.2661 | opp_overlap 2912176, overlap 2912172 2912171 2912169 CCAAACAATAGCGAA GCGGC GCAA GCCGC TTACGTCATCATCTT slyA 2912594 - 2912190 - | putative regulatory protein STY3046 2912765 - 2913358 + | decarboxylase STY3047 2913358 - 2914785 + | hypothetical protein STY3048 2914796 - 2915032 + | hypothetical protein TERM 3863 2915070 - 2915027 - T 100 -14.8 -4.27117 | opp_overlap 2915039, overlap 2915039 CTGGCAGAAGACAAA CGGTAAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTGACAA GGGTACTTACTCGCG TERM 3864 2915039 - 2915058 + T 100 -13.6 -5.40072 | opp_overlap 2915027 2915039 AAACGGTAAAAAAAA GGCCAGTC TGTC GACTGGCC TTTTTTTGACAAGGG TERM 3865 2915058 - 2915039 - T 100 -13.6 -5.82388 | opp_overlap 2915039, overlap 2915027 AAACGGTAAAAAAAA GGCCAGTC TGTC GACTGGCC TTTTTTTGACAAGGG rpoS 2916069 - 2915077 - | RNA polymerase sigma factor RpoS nlpD 2917253 - 2916132 - | lipoprotein NlpD TERM 3866 2916596 - 2916610 + g 73 -5 -4.6635 | overlap 2916587 CCGTCCCAGCAGGCT TGTTGT TTG GCAACA TTTTGTTAGCACTTT TERM 3867 2917063 - 2917078 + g 73 -5.4 -4.57073 | gap 1, overlap 2917066 2917070 ATTTGCGGCGCTTGT TGCGGCG TCG CGCC-CA TTTTTGGCGGCGGTG pcm 2918055 - 2917429 - | protein-L-isoaspartate O-methyltransferase TERM 3868 2917508 - 2917492 - G 77 -7.9 -4.33417 | overlap 2917493 GGTATCGATAATAAA TTCGCCG CCC CGGCGAC GCACGCGTTTCAAAA TERM 3869 2917507 - 2917493 - G 74 -11.4 -3.19568 | overlap 2917492 GTATCGATAATAAAT TCGCCG CCC CGGCGA CGCACGCGTTTCAAA surE 2918810 - 2918049 - | stationary phase survival protein SurE truD 2919840 - 2918791 - | tRNA pseudouridine synthase D TERM 3870 2918871 - 2918858 - G 77 -8.1 -4.07687 | ACGCTGGTGGCAAAA CTGCC TGCG GGCAG CCAGAAACGTAACTC TERM 3871 2919248 - 2919238 - G 74 -8.2 -4.01158 | overlap 2919239 AATTTGATTAAACAA CGCG CTA CGCG CCGCCGACAACCAAA TERM 3872 2919282 - 2919295 + g 71 -9.5 -3.51232 | overlap 2919279 TGCGTTTATTGCGAT CGCGC ACCG GCGCG TTACTTTGCGCCCAG ispF 2920316 - 2919837 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 2921026 - 2920316 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 3873 2920635 - 2920649 + g 70 -7 -4.21194 | opp_overlap 2920633 2920635, overlap 2920618 2920637 GGACTGGCGAGAATA CCGCCG ACC CGGCTG TTTTCGCTGATGGCC ftsB 2921356 - 2921045 - | cell division protein FtsB TERM 3874 2921435 - 2921464 + r 81 -12.3 -3.12351 | gap 1, opp_overlap 2921435 2921436, overlap 2921436 GGATTGCCGCGACAA CG-CCGGCAAATGT ACC ACATTTGCCGGATG TTACGTATACCCGAG TERM 3875 2921463 - 2921435 - R 74 -10.3 -3.29144 | opp_overlap 2921435 2921436, overlap 2921436 GGATTGCCGCGACAA CGCCGGCAAATGT ACC ACATTTGCCGGAT GTTACGTATACCCGA TERM 3876 2921436 - 2921462 + r 86 -13.8 -3.12327 | opp_overlap 2921436 2921435, overlap 2921435 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 3877 2921462 - 2921436 - R 83 -13.8 -2.57344 | opp_overlap 2921435 2921436, overlap 2921435 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 3878 2921586 - 2921571 - R 72 -8.2 -3.78034 | TAGCCATATGAATAA CGCGCC GAAC AGCGCG CCTACGGCCAGTAGA ygbE 2921903 - 2921547 - | hypothetical protein cysC 2922526 - 2921921 - | adenylylsulfate kinase TERM 3879 2922463 - 2922434 - G 79 -12.9 -2.90813 | gap 1, opp_overlap 2922436, overlap 2922431 2922436 GAGTCCGGTAAACCA CAGCACCAC-GCCA CGG TGGCCGTGGAGCTG TTCACGAGCGGCGAC cysN 2923952 - 2922513 - | sulfate adenylyltransferase subunit 1 TERM 3880 2922750 - 2922698 - G 70 -2.8 -4.82901 | gap 2, opp_overlap 2922706, overlap 2922701 2922702 GTCGGTCGATAAAAA TCAGCCCGCCCGTCACCGGATTTT GCTGATA AATATCCAGCG-CGAGC-GGCTCA TCGAATGTCATCTCT TERM 3881 2923088 - 2923072 - G 71 -5.8 -4.25104 | overlap 2923081 TTGTCGCCATCAAAA GTGACG ATACG CGCCAC GCTGGATTCCACGCC cysD 2924870 - 2923962 - | sulfate adenylyltransferase subunit 2 iap 2925121 - 2926167 + | alkaline phosphatase isozyme conversion aminopeptidase TERM 3882 2926490 - 2926541 + T 84 -10.2 -3.86897 | overlap 2926491 2926494 CTCCGCGGGGATCGG TTTATCCCCGCTGGC-GCGGGGAT CGGTTT ATCCCCGCTGGC-GCGGGGATCGG TTTATCCCCGCTGGC TERM 3883 2926491 - 2926540 + T 74 -11.5 -2.91924 | overlap 2926490 2926494 TCCGCGGGGATCGGT TTATCCCCGCTGGC-GCGGGGAT CGGTTT ATCCCCGCTGGC-GCGGGGATCG GTTTATCCCCGCTGG TERM 3884 2926494 - 2926537 + T 90 -15.4 -2.70354 | overlap 2926491 2926490 GCGGGGATCGGTTTA TCCCCGCTGGC-GCGGGGAT CGGTTT ATCCCCGCTGGC-GCGGGGA TCGGTTTATCCCCGC ygbF 2926945 - 2926652 - | hypothetical protein STY3065 2927865 - 2926948 - | hypothetical protein STY3066 2928569 - 2927865 - | hypothetical protein TERM 3885 2928420 - 2928408 - G 90 -4.7 -5.34555 | opp_overlap 2928408 CGAGAGCATAAAAAA GCCGC CAT GCGCC TCTTCGCGAAACAGA STY3067 2929294 - 2928569 - | hypothetical protein TERM 3886 2928725 - 2928709 - G 75 -6.6 -4.45738 | CATCCCAATAACAAA TACCCT CACGC AGGGTA AATCCACTTAATTCC STY3068 2930368 - 2929304 - | hypothetical protein STY3069 2930987 - 2930385 - | hypothetical protein TERM 3887 2930517 - 2930507 - G 74 -6.8 -4.3586 | CCATCCACAGGAAAA TGCC ATC GGCA AGTGAAAGAACATTC TERM 3888 2930584 - 2930600 + g 71 -4.3 -4.58283 | opp_overlap 2930575 2930574 AACAACTGGCAAAAT GTTTCCG GGT CGGACGC TTTTTGCAAACGTTC TERM 3889 2930823 - 2930833 + g 70 -6.8 -4.19746 | TATCATTACGCCATA TGGC GGC GCCA TTCTTTTCAACTCAG STY3070 2932539 - 2931004 - | hypothetical protein TERM 3890 2931538 - 2931548 + g 76 -5.4 -4.68705 | GGCACGAACGACCTT TGCA GGC TGCA TTTTGTTGAACTTAT TERM 3891 2933666 - 2933656 - g 71 -4.6 -4.56597 | overlap 2933664 CTCGCTTGTGAAAAA GCCC AAC AGGC CATCCTCCGAATGCC TERM 3892 2934038 - 2934020 - g 73 -8.9 -3.85817 | ACGGTGGGCGAGAAA TGTCGGA CTCTT TCCGACA ATCCATCTGGCAGCC STY3071 2932897 - 2935104 + | hypothetical protein TERM 3893 2935480 - 2935456 - f 76 -2.2 -5.40474 | gap 1, overlap 2935457 ATGGTGGCAAAAAAA TTCTGGTACAT TCCA ATGT-CCAGAT GAGGAAACATTAGCC sopD 2935978 - 2936931 + | hypothetical protein TERM 3894 2936984 - 2936954 - T 82 -11.3 -3.55453 | opp_overlap 2936961, overlap 2936961 CAGTAATATAACCAA TTTAAAATCCGGC TGCCT GCCGGATTTTACA TAGCAGCAAGTATAA TERM 3895 2936977 - 2936961 - T 83 -9.4 -4.32804 | opp_overlap 2936961, overlap 2936954 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTACATAGCAGCA TERM 3896 2936961 - 2936977 + T 79 -9.4 -4.18018 | opp_overlap 2936961 2936954 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTACATAGCAGCA cysH 2937753 - 2937019 - | phosphoadenosine phosphosulfate reductase TERM 3897 2937281 - 2937310 + g 76 -10 -3.81137 | gap 1, opp_overlap 2937257, overlap 2937304 CTACCGGACTGCTCG CGACGCAGACCCG CAAAC CAGGTCTGCG-CG TTTAACTCTTTGAGC cysI 2939541 - 2937829 - | sulfite reductase subunit beta TERM 3898 2938722 - 2938745 + g 74 -3.1 -4.90079 | gap 1, opp_overlap 2938723, overlap 2938723 2938725 GCGGCAGATAGCCAA ACT-CGCTCG CGGTA CGAGCGTAGG TTTTCTTATTACCGT cysJ 2941340 - 2939541 - | sulfite reductase subunit alpha TERM 3899 2940891 - 2940906 + g 71 -4.6 -4.61566 | opp_overlap 2940891 GTCGCCGAGGCTAAA CACGGC AAAA GCGGTG TTTTCTAGTTTCGGC TERM 3900 2941241 - 2941227 - G 86 -3.5 -5.41143 | gap 1, overlap 2941228 TACGCCCCAAAAAAA GCC-GG AGAC CCAGGC AAGCTGTTCGGGAGT STY3077 2941776 - 2942138 + | putative 6-pyruvoyl tetrahydrobiopterin synthase STY3078 2943025 - 2942228 - | hypothetical protein TERM 3901 2943332 - 2943342 + r 89 -4 -5.67283 | opp_overlap 2943332 TTGATGCAAAAAAGT TCAT AGA ATGA TTTTTTCTTTAAATT STY3080 2944180 - 2943509 - | hypothetical protein TERM 3902 2943583 - 2943595 + g 80 -9.1 -4.09519 | opp_overlap 2943583 ACGTTTCAATACACA GACGC GTC GCGTC TTCTTTCTGGCTAAT TERM 3903 2944127 - 2944111 - G 78 -2.2 -5.24551 | GTAAACGAATAAAAA TAGCGG GGACG CCGGTA AAATAACCCTCGCCT TERM 3904 2944288 - 2944275 - R 100 -9.5 -5.77988 | opp_overlap 2944275 ACAGATACAAAAAAA CCCGC CGAA GCGGG TTTATACGTTAAGAG TERM 3905 2944275 - 2944288 + r 80 -9.5 -3.97368 | opp_overlap 2944275 ACAGATACAAAAAAA CCCGC CGAA GCGGG TTTATACGTTAAGAG eno 2945614 - 2944316 - | phosphopyruvate hydratase TERM 3906 2945682 - 2945659 - R 100 -13.9 -4.08164 | opp_overlap 2945657 2945656 AAAACTTCAGACAAA CGGTGCACC GCTGAG GGTGCACCG CCGTTCTAACTTTTT pyrG 2947334 - 2945697 - | CTP synthetase mazG 2948362 - 2947562 - | nucleoside triphosphate pyrophosphohydrolase TERM 3907 2947960 - 2947975 + g 87 -8.2 -4.57073 | overlap 2947963 2947969 GCGGAATATCGTCCA GCGCGG AATG CTGCGC TTTTTGCGCGCGCTC TERM 3908 2948720 - 2948739 + H 91 -8 -5.24531 | CGCCAGTTTAATATT CAAAAAAG ACCG CTTTTTTG TTTTTTCTGAAACAT TERM 3909 2949585 - 2949608 + H 70 -8.9 -3.41203 | opp_overlap 2949585 AGTCACGACGATAAA TACCCTGCC GCTTTA GGTAGGGTA TTCCTGTTGAGTTTT steB 2949638 - 2952337 + | outer membrane usher protein TERM 3910 2952509 - 2952499 - g 71 -4.6 -4.59773 | overlap 2952500 CGTCACGCTGAAAAA CGGC AAC GCCA CTCTGCCCTATCTCG steC 2952350 - 2953123 + | periplasmic fimbrial chaperone steD 2953143 - 2953649 + | fimbrial subunit steE 2953664 - 2954134 + | fimbrial subunit steF 2954131 - 2954667 + | fimbrial subunit STY3091 2954726 - 2955844 + | hypothetical protein STY3092 2956439 - 2957269 + | hypothetical protein STY3093 2958334 - 2957978 - | hypothetical protein TERM 3911 2958368 - 2958397 + r 86 -14.4 -2.68142 | opp_overlap 2958385, overlap 2958366 2958364 ATGGGGTTGGCTAAT GCGGCTTTGCTG AACGAG TAGCAAAGCCGC TACATTATTACTGTC relA 2960653 - 2958419 - | GDP/GTP pyrophosphokinase TERM 3912 2959559 - 2959576 + g 77 -8.3 -4.1523 | opp_overlap 2959558, overlap 2959557 ATGGCCGGAACGCAC GCCGCCG GACG CGGCGCC TTCTTTATACTTCCA TERM 3913 2960698 - 2960672 - R 73 -10.9 -2.52464 | gap 1, opp_overlap 2960669 CCTCTCCTTAAGGGA CCAGGCCTACCG AAGT CGGTAAGCC-GG TAATCATTACATGCG rumA 2962000 - 2960705 - | 23S rRNA 5-methyluridine methyltransferase TERM 3914 2962599 - 2962610 + G 85 -2.2 -5.47159 | AGATTTTTATCTCCA GCGT GATG ATGC TTTTTTGTATTGGCA TERM 3915 2962930 - 2962909 - g 71 -4.3 -4.57569 | opp_overlap 2962910, overlap 2962910 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAGTCGGAGTTC TERM 3916 2964450 - 2964413 - g 76 -9.7 -3.85698 | gap 1, opp_overlap 2964445, overlap 2964414 TTGCTGCGCTATAAA CCCGGCGCCAAC-GTAGC AGC GCGCCTGATGGCGCCGGA ACCGGCTGAGTTTAT TERM 3917 2964449 - 2964414 - g 71 -11 -2.91276 | gap 1, opp_overlap 2964445, overlap 2964413 TGCTGCGCTATAAAC CCGGCGCCAAC-GTAGC AGC GCGCCTGATGGCGCCGG AACCGGCTGAGTTTA barA 2962058 - 2964814 + | hybrid sensory histidine kinase BarA STY3097 2966000 - 2964858 - | hypothetical protein TERM 3918 2966048 - 2966073 + r 73 -11.1 -2.52464 | opp_overlap 2966048 2966051 CATACACCCAGAGAA GGACCGGTTCC TTAC GGAACCGGCTC TGACTTAACGCACCA TERM 3919 2966073 - 2966048 - R 82 -11.1 -3.54436 | opp_overlap 2966048, overlap 2966051 CATACACCCAGAGAA GGACCGGTTCC TTAC GGAACCGGCTC TGACTTAACGCACCA TERM 3920 2966070 - 2966051 - R 84 -13.6 -2.90061 | opp_overlap 2966048, overlap 2966048 ACACCCAGAGAAGGA CCGGTTCC TTAC GGAACCGG CTCTGACTTAACGCA ygcX 2967418 - 2966078 - | glucarate dehydratase 1 ygcY 2968779 - 2967439 - | glucarate dehydratase 2 TERM 3921 2967523 - 2967535 + g 77 -4.7 -4.84359 | TGCATCATTACGCGC GCCGC CTG GCAGC TTTTTATACGCGTCA TERM 3922 2967609 - 2967622 + g 95 -8.1 -4.98531 | CTGGCGCATCCGGAA CGGCA ATTT TGCCG TTTTTAATTTCCAGC TERM 3923 2968093 - 2968107 + g 95 -5.6 -5.40072 | ATCCACGGTAATACG CGCGTC CGG GAAGCG TTTTTTTAGCGCGCG ygcZ 2970134 - 2968776 - | glucarate transporter TERM 3924 2969839 - 2969827 - G 85 -9.1 -4.46757 | AAGATATCGACAAAA CCCTG CAA CAGGG TGAAGACTGACCAAA TERM 3925 2970300 - 2970288 - R 74 -3.3 -5.01535 | GGAGAAGTATAAAAA GCGCG CCA CACAC ACTCACCGTGCAACA TERM 3926 2970416 - 2970401 - R 72 -10.4 -2.78901 | overlap 2970400 AAATGAAATCAGAAG GCGTCG GCGT CGACGC AGGAGGAGTAAAAAG TERM 3927 2970607 - 2970588 - R 72 -10.7 -2.82666 | opp_overlap 2970588 2970587, overlap 2970585 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA TERM 3928 2970588 - 2970607 + r 72 -10.7 -2.78679 | opp_overlap 2970585 2970588, overlap 2970587 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA STY3102 2971064 - 2970615 - | flavodoxin yqcB 2971865 - 2971083 - | tRNA pseudouridine synthase C yqcC 2972194 - 2971865 - | hypothetical protein TERM 3929 2972114 - 2972100 - G 93 -11.4 -4.41348 | GTGCTGGTAAACAAA TGCGCC TGC GGCGCA TCCAGCCGCCAGTGG TERM 3930 2972240 - 2972269 + r 79 -10.7 -3.51411 | opp_overlap 2972242, overlap 2972236 2972241 GAAGAATAACAAAAA AAGGGAGCACTGT ATAA ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 3931 2972241 - 2972268 + r 83 -14.2 -2.70525 | opp_overlap 2972242, overlap 2972240 2972236 AAGAATAACAAAAAA AGGGAGCACTGT ATAA ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 3932 2972267 - 2972242 - R 100 -17.7 -5.97979 | opp_overlap 2972241 2972240 2972236 AGAATAACAAAAAAA GGGAGCACTGT ATAA ACAGTGCTCCC GGTTCGTTTCGCAGC syd 2973349 - 2972804 - | SecY interacting protein Syd queF 2973418 - 2974266 + | 7-cyano-7-deazaguanine reductase TERM 3933 2975111 - 2975100 - g 72 -3.6 -4.70659 | CCGGATATCGAAAAA CGCC TGGA AGCG TTCGTCCGTATCGCA ygdH 2974380 - 2975744 + | hypothetical protein TERM 3934 2975750 - 2975778 + F 77 -10.2 -3.3858 | overlap 2975751 2975773 CTGCGCTTAACGCTT ATGCCCGGTTGC CGCCA GCAGCCGGGCGC TTCTCCCATTCCTTT TERM 3935 2975751 - 2975777 + F 83 -13.7 -2.62425 | overlap 2975750 2975773 TGCGCTTAACGCTTA TGCCCGGTTGC CGCCA GCAGCCGGGCG CTTCTCCCATTCCTT sdaC 2976309 - 2977598 + | putative serine transporter TERM 3936 2977607 - 2977625 + F 90 -13.1 -3.61902 | CAGCTAAGTCCTTTA GCGCCGC TTACC GCGGCGC TTCTCTATGATACAA TERM 3937 2977764 - 2977729 - g 83 -10.4 -3.95584 | opp_overlap 2977728 GTCGGACCAATGAAA GCAGGCAAGCAGTTCA CGGA CGATCTGATTGCCCGC CATATTCTTACAGAT TERM 3938 2978283 - 2978263 - g 86 -11.9 -3.83026 | opp_overlap 2978266, overlap 2978266 GCTCTGCACAGTAAA GAAGCGCTG GAG CAGCACTTC GCCAAGGTCTGGGAG TERM 3939 2978280 - 2978266 - g 71 -7.8 -4.04806 | opp_overlap 2978266, overlap 2978263 CTGCACAGTAAAGAA GCGCTG GAG CAGCAC TTCGCCAAGGTCTGG TERM 3940 2978436 - 2978412 - g 95 -14.3 -3.4252 | GGTCAGTCAGGATAA GACCACCACCG ATC CGATGGCGGTC GTCGACTGGATCAAT sdaB 2977657 - 2979024 + | L-serine dehydratase 2 (L-serine deaminase 2) TERM 3941 2979051 - 2979079 + F 82 -7.5 -4.69053 | gap 2, opp_overlap 2979060, overlap 2979063 2979068 TTTTAGGATCTGTAG GCCGGATAAGGCG CTCGC CGCC--ATCCGGC TTTTGTTGCCTGATG xni 2979135 - 2979950 + | exonuclease IX fucO 2981190 - 2980042 - | L-1,2-propanediol oxidoreductase fucA 2981854 - 2981207 - | L-fuculose phosphate aldolase TERM 3942 2981390 - 2981410 + g 76 -9.7 -3.8046 | overlap 2981397 2981398 ACAAGCGATAAGCCC GTGATGCTG TAA CAGCGTCGC TTTACGATTTTTAAG TERM 3943 2982646 - 2982656 + G 74 -6.8 -4.25104 | overlap 2982651 TTTCGTCATTCCAAT TCCC GCT GGGA TTTTGATGAAAAAAC fucP 2982410 - 2983726 + | L-fucose transporter TERM 3944 2983779 - 2983768 - g 85 -2.2 -5.52384 | overlap 2983769 2983771 CTGTCATGAAAAAAA TCAG CTTA CCGA AAATCGGTATCCGCC TERM 3945 2984253 - 2984232 - g 74 -2.2 -5.07486 | gap 1 GACGTCGAAGAAAAA CTG-CTGCG TTTTG CGCGGGCAG GGTTAGCGGTAGCCA TERM 3946 2984484 - 2984468 - g 70 -3 -4.82901 | gap 1, overlap 2984470 GTGGGCGGATAAAAA CTTCCGC TACG GCG-AAG ATCAAAACGCCTCGC TERM 3947 2984913 - 2984874 - g 73 -10.6 -3.33261 | gap 1, opp_overlap 2984898, overlap 2984912 CCGGAAGCCGTAGAA CGCGTCACCGGCCAGGCGC TCA GCGCCCTGGCGG-AACACG GCATTATTCACCTGA fucI 2983758 - 2985488 + | L-fucose isomerase fucK 2985634 - 2987052 + | L-fuculokinase TERM 3948 2987352 - 2987380 + G 71 -5.9 -4.36914 | TAGAAGCGCCGTGCC CGGATATCGTTCG TAT CGACCGCTATGCG TTTTATGAGCGGGCG fucU 2987054 - 2987476 + | fuscose operon fucU protein TERM 3949 2987472 - 2987462 - f 76 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CGCC GTAATCTCTTGCCGG TERM 3950 2987490 - 2987508 + F 83 -13.1 -3.17212 | AATCTCTTGCCGGTG CGCCCGC ATGAC GCGGGCG TTCATCGAATGATGG fucR 2987534 - 2988244 + | DNA-binding transcriptional activator FucR TERM 3951 2988253 - 2988299 + T 100 -10.9 -4.88736 | gap 2, opp_overlap 2988254, overlap 2988254 GTCATAGGCCGGATA AGCG-TGC-GCCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGCG TTTTTATCGCTCGTC TERM 3952 2988254 - 2988298 + T 95 -14.4 -3.52519 | gap 2, opp_overlap 2988254, overlap 2988253 TCATAGGCCGGATAA GCG-TGC-GCCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT TERM 3953 2988298 - 2988254 - T 100 -16.6 -3.30771 | gap 2, opp_overlap 2988253 2988254 TCATAGGCCGGATAA GCG-TGC-GCCATCCGGCGC TGATGAC GCGCCGGATGACGGCAGCGC GTTTTTATCGCTCGT ygdE 2989403 - 2988303 - | putative RNA 2'-O-ribose methyltransferase ygdD 2989791 - 2989396 - | hypothetical protein TERM 3954 2989763 - 2989751 - G 100 -9.1 -4.94058 | overlap 2989753 GCAACGTAAATAAAA CCGCT GAT AGCGG CGACAATCAGCATAA gcvA 2990727 - 2989810 - | DNA-binding transcriptional activator GcvA TERM 3955 2990167 - 2990183 + g 83 -7.9 -4.67168 | overlap 2990182 CAATAACGTATGTTT CGCCAGA TCC TCCGGCG TTTTTAACGGTTTTT TERM 3956 2990701 - 2990691 - G 74 -4.6 -4.77036 | opp_overlap 2990691 CGGCAGCATCAAAAA CGCG TAA CGCA TTTAAAGGAGGTAAT TERM 3957 2990759 - 2990787 + r 86 -4.6 -5.58454 | opp_overlap 2990763 2990770 2990773, overlap 2990773 GTCGAATGAATTTAA CAAATAGGTAAC AATAG GTAACCTATTAG TTTTTTTAATCTGAG TERM 3958 2991033 - 2991052 + r 100 -10.7 -6.02914 | opp_overlap 2991033 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC TERM 3959 2991052 - 2991033 - R 70 -10.7 -2.57423 | opp_overlap 2991033 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC STY3123 2991301 - 2991074 - | lipoprotein TERM 3960 2991755 - 2991741 - g 78 -2.1 -5.14563 | CGCCCGATGAAAAAA GTATC GTCTG GACAC GCGGCACCACCGAAG STY3124 2991494 - 2992699 + | cysteine sulfinate desulfinase STY3125 2992699 - 2993142 + | hypothetical protein STY3126 2993415 - 2994329 + | hypothetical protein STY3127 2995187 - 2994381 - | hypothetical protein TERM 3961 2994884 - 2994897 + g 71 -9.5 -3.51708 | overlap 2994881 CATCGATAACCGTTA CCCGG CACT CCGGG TTAATTTGCCGAATC TERM 3962 2995094 - 2995118 + g 78 -7 -4.59773 | opp_overlap 2995093 CCACGACGCAGATAT GCGCCTCAGC AAACC GCTGCAGCGC TTTTTCACCGTACAG TERM 3963 2995225 - 2995207 - R 100 -10.3 -5.55769 | CCTCAGAATAAAAAA GGTGAGG TTATT CCTCACC CCTGCTCACTATTTT TERM 3964 2995318 - 2995330 + r 78 -6.2 -4.56597 | opp_overlap 2995299, overlap 2995318 2995317 CTAAACACGTTACCG GCGC CCGGC GCGC TTTTTAACACCCAGA mltA 2996393 - 2995296 - | murein transglycosylase A TERM 3965 2995934 - 2995955 + g 77 -8 -4.08945 | gap 1 CTGCGTAGATCTGGG CGCGGGACG GTAAG CGTCC-GCG TTTTGGCGGCATACT TERM 3966 2996304 - 2996321 + g 84 -9.1 -4.25104 | CCCGTCCTTATATTG CTGACCG CGAT CGGTCGG TTTTGATGAACAGGC TERM 3967 2996794 - 2996807 + r 100 -8.1 -5.77988 | opp_overlap 2996794 AACCAACTTAATGAA CACCC TTAC GGGTG TTTTTTTGTATCTGT STY3129 2998146 - 2996893 - | N-acetylmuramoyl-L-alanine amidase TERM 3968 2998296 - 2998284 - H 78 -5.5 -4.73613 | GCATTACTAAGAAAA GCGAT CGG ACCGC ATAAAATTTACGCTT argA 2998379 - 2999710 + | N-acetylglutamate synthase TERM 3969 2999791 - 2999779 - T 70 -9.1 -3.30124 | TTGGAGGCCGGATAA GACGC TAC GCGTC GCCATCCGGCGAGAA RecD 3001648 - 2999813 - | exonuclease V subunit alpha TERM 3970 3000560 - 3000576 + g 74 -10.1 -3.63744 | opp_overlap 3000559 3000570, overlap 3000558 GCCGATGCCAGAATC GCTGCCG AAA CGGTAGC TCTTTTGCAACAAAC TERM 3971 3000792 - 3000772 - G 76 -3.2 -5.07486 | gap 1, overlap 3000775 3000776 GATCGCCAAGAAAAA TGAC-CCGC CCGT GCGGCGGCA GAGCGTCAATCAAAC TERM 3972 3001303 - 3001286 - G 76 -3.3 -5.01732 | opp_overlap 3001286, overlap 3001288 AACCTCGTTAAAAAA GCGCGCA ACCG TACGCTC GTTGCACCACATGCG RecB 3005190 - 3001645 - | exonuclease V subunit beta TERM 3973 3001890 - 3001873 - G 72 -11.3 -3.01497 | GTACTGCAAATCATA GCGATGC GCCT GCATCGC CGCAGCCATCGCCGT TERM 3974 3004149 - 3004161 + g 74 -4.7 -4.72272 | CGTCAAACCCCAGCT CGCCG CGC CGTCG TTTTTCCTGAGCCAC TERM 3975 3004272 - 3004293 + g 83 -12.3 -3.74693 | gap 1, opp_overlap 3004267 CGACAAACAATGGGT GCT-GGGGCG TCA CGCCCCCAGC TTTGGTGCGCTCAGC TERM 3976 3004337 - 3004316 - G 82 -5.1 -5.08824 | opp_overlap 3004331, overlap 3004328 CGCTCAGCTAAAAAA CGCTGTGAA AATT TTCCCAACG CCTCGGGTAATTGAT TERM 3977 3004670 - 3004642 - G 70 -8.8 -3.63627 | gap 1 CTTCCACACGTCAAA CACCACCTGCGCG ATGT CGCGC-GGCAGCG GATAGCAATGACGCC TERM 3978 3005157 - 3005135 - G 71 -8.4 -3.90588 | GATGCTTCAATCAAA CGCTCGCC TGTAAGG GGCAAGCG CAGAGGATCAAGAGT ptr 3008071 - 3005183 - | protease III precursor (pitrilysin) TERM 3979 3005889 - 3005905 + g 71 -4.3 -4.62302 | opp_overlap 3005882 3005879, overlap 3005891 CGACACCACGCCGAT CCGTTCG CCG CGAGCTG TTTTTGGACATCTTG TERM 3980 3006730 - 3006740 + g 81 -6.8 -4.72272 | TCTGCGGCGTCATCA TCGC CAG GCGA TTTTTGATAGCGGCA TERM 3981 3007756 - 3007771 + g 100 -7.6 -5.40474 | overlap 3007747 GGTATTCGGCAAGGC TATCCG CCTG CGGATA TTTTTTTGACCCCAT TERM 3982 3008156 - 3008172 + r 88 -3.7 -5.64274 | AACGGGATATTATTG TGCTG AACCAGG CAGCA TTTTTTTATCAGTAA recC 3011620 - 3008249 - | exonuclease V subunit gamma TERM 3983 3008641 - 3008629 - G 73 -9.1 -3.90048 | overlap 3008627 CTTTGCGCAAAAACA GGCGA CTT TCGCC ACTACCGCCGCTGGC TERM 3984 3009509 - 3009520 + g 72 -3.6 -4.68593 | overlap 3009476 GCGACGGCTACGATC CCCG CGCA TGGG TTTTTGGCTCATCAG TERM 3985 3010342 - 3010318 - G 72 -12.1 -2.63636 | overlap 3010322 AAATAGCATAAGGCA GATAGCGCTCC GTT GGCGCGCTACC AAATACCGCCTGGAT TERM 3986 3010648 - 3010664 + g 70 -6.5 -4.19506 | opp_overlap 3010648 3010647 3010650, overlap 3010651 TAATATCAACAAACG CATCCAG CTC CTGGCTG TTTTCCAGTTCAGAT TERM 3987 3011449 - 3011439 - G 74 -6.8 -4.27316 | GCCGGTAACGGAAAA GCGA TAT TCGC CGCAATACCAAACTT ppdC 3011956 - 3011636 - | hypothetical protein ygdB 3012348 - 3011941 - | hypothetical protein ppdB 3012908 - 3012345 - | hypothetical protein ppdA 3013369 - 3012899 - | hypothetical protein TERM 3988 3013075 - 3013043 - G 83 -14.9 -2.77569 | overlap 3013035 3013034 3013068 AAAGAAGGCTAACGA CGGCGTGATATCGGC AAG GACGACATCACGCCA GTCGGGCGTAAACAC TERM 3989 3013536 - 3013512 - R 90 -9.9 -4.4784 | opp_overlap 3013515, overlap 3013514 3013515 CAAAGGGTAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 3990 3013534 - 3013514 - R 93 -12.5 -3.8323 | opp_overlap 3013515, overlap 3013512 3013515 AAGGGTAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 3991 3013515 - 3013533 + r 100 -16 -4.91109 | opp_overlap 3013515 3013514 3013512 AGGGTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 3992 3013533 - 3013515 - R 93 -16 -2.88854 | opp_overlap 3013515, overlap 3013514 3013512 AGGGTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 3014073 - 3013615 - | transposase for insertion sequence element IS200 TERM 3993 3014186 - 3014204 + r 100 -16 -4.18018 | opp_overlap 3014176 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 3994 3014224 - 3014243 + r 74 -10.7 -3.2963 | opp_overlap 3014224 CCATAGACAAAAAAA CCGACGC GCGATG GCGTCGG TTATGGCAGGATCGT TERM 3995 3014243 - 3014224 - R 100 -10.7 -5.76633 | opp_overlap 3014224 CCATAGACAAAAAAA CCGACGC GCGATG GCGTCGG TTATGGCAGGATCGT thyA 3015059 - 3014265 - | thymidylate synthase TERM 3996 3014637 - 3014616 - G 76 -5.1 -4.75063 | gap 1, opp_overlap 3014625 3014626 ATAAAACTGGAAAAA GGCG-TGACA CGG CGCCAGCGCC ATCTTATCCAGCTCG lgt 3015941 - 3015066 - | prolipoprotein diacylglyceryl transferase TERM 3997 3015567 - 3015556 - G 71 -4.4 -4.64334 | AACGGCGCAATAAAA TCAG ACAC CTGA AAGAACGAGCGCTTC TERM 3998 3016015 - 3015991 - R 70 -9.2 -3.37354 | overlap 3015980 GATAGCGATTGATAA GCGCGCCTGC GCGTT GCAGACGCTC CAAAGGTGCGAATAA ptsP 3018400 - 3016154 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein STY3145 3018943 - 3018413 - | dinucleoside polyphosphate hydrolase TERM 3999 3019879 - 3019864 - g 77 -7.6 -4.3208 | GCGTAGAACTGAAAA CTATCC CGGT GGATAG TCTGGGTCGTCCTCT mutH 3019626 - 3020321 + | DNA mismatch repair protein TERM 4000 3020863 - 3020851 - g 71 -7.7 -3.97139 | opp_overlap 3020850 GAAGGCGAAGAAGAA GGGTT AAA AACCC GGGTTTCTTCTTTCC STY3149 3020503 - 3021216 + | hypothetical protein TERM 4001 3021221 - 3021250 + F 82 -12.9 -2.82263 | gap 1, overlap 3021218 ATCCGCTGTAATCCT GT-CTCGCTCCCCC GCC GGGGGAGCGAATAC TCACTTTATTTCCTT STY3150 3021387 - 3021605 + | lipoprotein TERM 4002 3021886 - 3021876 - g 71 -4.6 -4.63486 | overlap 3021878 ATTTGGTGAACAAAA CAGC GAA GCCG ACGCTCACGCACAGC TERM 4003 3022622 - 3022612 - g 72 -2.4 -4.91459 | overlap 3022614 GAACAGGCACAAAAA GCCG TTG CCGC CTACGTCGATATCGC STY3151 3021796 - 3022836 + | putative aldo-keto reductase ygeD 3024125 - 3022923 - | hypothetical protein TERM 4004 3023436 - 3023419 - G 79 -7.7 -4.49311 | gap 1, overlap 3023423 AGCACCAGCAGAAAA CGCA-GCG TCA CGCCTGCG CCCCAGAATAGCCCG aas 3026277 - 3024118 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 4005 3024519 - 3024529 + g 77 -8.2 -4.07568 | ACCCGCGCTCGGTTT CGCC TCT GGCG TTTTCCGCCGACGGC TERM 4006 3025250 - 3025266 + g 77 -7.9 -4.28254 | ATCCACAGCTTGTCG GCGGGTG TGA CGTCCGC TTTTAAATCTTCCAG TERM 4007 3026398 - 3026374 - R 83 -9.9 -4.16284 | opp_overlap 3026377, overlap 3026376 3026377 ATAGGTTCGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 4008 3026396 - 3026376 - R 93 -12.5 -3.67877 | opp_overlap 3026377, overlap 3026374 3026377 AGGTTCGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 4009 3026395 - 3026377 - R 93 -16 -2.80244 | opp_overlap 3026377, overlap 3026376 3026374 GGTTCGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 4010 3026377 - 3026395 + r 100 -16 -4.91109 | opp_overlap 3026376 3026374 3026377 GGTTCGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 3026935 - 3026477 - | transposase for insertion sequence element IS200 TERM 4011 3027048 - 3027066 + H 100 -16 -4.18018 | opp_overlap 3027038 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 4012 3027087 - 3027104 + H 81 -12.7 -3.14132 | opp_overlap 3027087 CATAGACAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4013 3027104 - 3027087 - H 100 -12.7 -6.06529 | opp_overlap 3027087 CATAGACAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4014 3027307 - 3027288 - H 100 -10 -6.23545 | opp_overlap 3027288 GCGAAACAAAAAAAA CCTGCGCA TCTC TACGCAGG TTGGTGTAATTCGTG TERM 4015 3027683 - 3027661 - g 74 -7.6 -4.10429 | overlap 3027648 AACGATTCGCCAAAA GCCAGCGAAG CGT CCCGGCTGGC GGTGACCAGCGCAAT galR 3027580 - 3028608 + | DNA-binding transcriptional regulator GalR TERM 4016 3028742 - 3028713 - g 74 -4.3 -4.68908 | gap 1 GGCAGGTAAAAGAAA GCACGCGCCAGAAA GTG TTTACGGCG-ATGC AGGCTCTGGACTATC TERM 4017 3028853 - 3028879 + G 74 -10 -3.72576 | overlap 3028854 TATTTTGGCAGTTTG TTGCGCCGGGCG TCG CGCCAGGCGGAG TTTCATAACAAGCAG TERM 4018 3029599 - 3029620 + G 84 -5.7 -5.03314 | CACGCTGATTCTGCG CGAGTCCGT CGCC GCGGGCCCG TTTTTTCAACGTCCG STY3156 3028619 - 3029641 + | regulatory protein lysA 3030913 - 3029651 - | diaminopimelate decarboxylase lysR 3031031 - 3031966 + | DNA-binding transcriptional regulator LysR ygeA 3032645 - 3031938 - | putative racemase araE 3034173 - 3032758 - | L-arabinose isomerase TERM 4019 3033337 - 3033327 - G 78 -6.8 -4.62069 | overlap 3033310 CGGCCATTTTAAAAA TGCG CGG CGCA TAGTACATAATGATG TERM 4020 3034465 - 3034448 - R 93 -7 -5.69473 | opp_overlap 3034448 3034447 GAGATCATAAAAAAA CCCTGT ACGAGG ACAGGG CTTTATCAGTTTTTT kduD 3035288 - 3034527 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 4021 3035138 - 3035116 - G 76 -2.7 -5.03314 | GTCAGGCTTAAAAAA CGTCGTC-CCA GAG CGGTGACG-CG CGCAATAGTTTCCGT kduI 3036179 - 3035343 - | 5-keto-4-deoxyuronate isomerase TERM 4022 3036219 - 3036235 + r 81 -8.1 -4.41616 | opp_overlap 3036219 CGCAACGGCATAAAA TCAAAAC ACT GTTTTGA TTTATTTAACGGCAT TERM 4023 3036235 - 3036219 - R 81 -8.1 -4.42788 | opp_overlap 3036219 CGCAACGGCATAAAA TCAAAAC ACT GTTTTGA TTTATTTAACGGCAT TERM 4024 3036544 - 3036561 + r 88 -8.4 -4.83169 | TCTGTCACTGGCTTT GCCCTC GTGATA GAGGGC TTTTTATGACGGAAT yqeF 3037787 - 3036609 - | acetyl-CoA acetyltransferase TERM 4025 3036970 - 3036957 - G 71 -9.5 -3.54424 | overlap 3036958 GCCGACGCTGGCAAA CGCGC GGAT GCGCG CCAGCACCGGCAGCC TERM 4026 3037122 - 3037086 - G 71 -8.6 -3.89412 | gap 1, opp_overlap 3037115 ACCTAAACTATCAAA CGCCGGATGCAGCAGGG CTAA CCCCTCCGCA-CTGGCG TCGGCCCGCGGTTGT TERM 4027 3037875 - 3037862 - R 76 -2.4 -5.41143 | GATTGTTTAAAAAAA GTGA GTTTTA TCAC AAAGGAAATGACGCT STY3165 3038773 - 3037910 - | regulatory protein TERM 4028 3038018 - 3038032 + g 73 -5.6 -4.56597 | overlap 3038020 CCAGCCAGGAACATC CAGCTG CGC CAGCGG TTTTTCCGCCGCAAA STY3166 3038850 - 3039332 + | hypothetical protein STY3167 3039474 - 3040703 + | amino acid ABC transporter TERM 4029 3040738 - 3040711 - T 90 -9.9 -4.54727 | opp_overlap 3040713, overlap 3040713 TCGGCTAAAGTAAAA GATAGCCGGGA TATAAC TCCCGGCTATT TTATATAAGAATCCA TERM 4030 3040736 - 3040713 - T 95 -12.5 -3.88396 | opp_overlap 3040713, overlap 3040711 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC TERM 4031 3040713 - 3040736 + T 100 -12.5 -4.53303 | opp_overlap 3040713 3040711 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC STY3168 3041006 - 3040734 - | hypothetical protein STY3172 3042956 - 3042198 - | hypothetical protein TERM 4032 3042696 - 3042684 - G 71 -4.8 -4.56597 | CCGGTCGCTGAAAAA CAGC TCATC GCTG ATAATCATAACCGGG TERM 4033 3042932 - 3042942 + g 71 -8.2 -3.80945 | opp_overlap 3042924 CGATAATCTGCCGGG CCGG TAT CCGG TTATGTTCTGTCATC STY3173 3043455 - 3042943 - | hypothetical protein STY3174 3044676 - 3043600 - | hypothetical protein stdC 3045416 - 3044673 - | fimbrial chaperone protein stdB 3047946 - 3045457 - | outer membrane fimbrial usher protein TERM 4034 3047053 - 3047033 - G 70 -6.7 -4.19238 | opp_overlap 3047035 TCGGGAAGCTCAAAA GGCCCCGGT GAC ACCCGGGTC TGGTACAGAATGCGA TERM 4035 3048036 - 3048011 - R 72 -4.7 -4.60797 | opp_overlap 3048011 TGGTCAGATATAAAA GCCGTCC GAACCCCTCCGT GGACGGC TTCTCCCTGTCGTTA stdA 3048647 - 3048066 - | fimbrial protein TERM 4036 3048875 - 3048859 - R 86 -5.1 -5.4593 | opp_overlap 3048863 3048867 3048873, overlap 3048861 3048863 TTAAAACAATAAAAA TAGATCG ATA CGATCGA TGATTATGATCGTAA TERM 4037 3048873 - 3048861 - R 76 -7.7 -4.32946 | opp_overlap 3048863 3048867, overlap 3048859 3048863 AAAACAATAAAAATA GATCG ATA CGATC GATGATTATGATCGT STY3178 3049998 - 3049366 - | hypothetical protein TERM 4038 3049581 - 3049596 + g 90 -4.6 -5.42131 | CGCCTGCTAGTTTCA GGGCCT CTAT AGTCCC TTTTTTATCTCCTTC STY3179 3050581 - 3050045 - | outer membrane protein (associated with virulence) TERM 4039 3051177 - 3051157 - R 100 -11.9 -5.99154 | opp_overlap 3051160 CAGGAAACAAAAAAA GAAGGGAGC GGT ACTCCCTTC GTAACCATGTCAGAA STY3182 3051786 - 3051388 - | plasmid maintenance protein TERM 4040 3051683 - 3051657 - G 83 -12.4 -3.62096 | TTTCAGCACCGTAAA TCAGCTCCATTA AGG TGATGGAGCTGA TACACATTCGGGATG STY3183 3052013 - 3051786 - | hypothetical protein TERM 4041 3052028 - 3052050 + H 70 -9.3 -3.35679 | TAACTGCCCCCTTTC TGGATATAC AACGC GTATATCCA TTATGAGTAGAGGCG STY3184 3052190 - 3052441 + | endonuclease fragment TERM 4042 3053357 - 3053330 - g 77 -4.1 -5.12617 | GAACCACCTAAAAAA CGGGGATTATA TCGGTG TCTACTCCCCG CTTGACGGGCTGGAC STY3186 3052722 - 3053522 + | hypothetical protein TERM 4043 3054074 - 3054045 - T 82 -7.1 -4.80453 | overlap 3054048 CTAGTACAAAATAAA GACCAGACATCCA GTTA CGGAAGTCTGACC AATAAGTCGTTATTG STY3188 3055077 - 3054094 - | hypothetical protein TERM 4044 3054966 - 3054985 + g 70 -10 -3.33815 | opp_overlap 3054965, overlap 3054974 3054975 TAGCCAGCTCAAAGG CGTAGACC TGAG GGTCTGCG TTAGTTGGCAAACCT STY3189 3055644 - 3055153 - | hypothetical protein STY3191 3057005 - 3056352 - | hypothetical protein STY3192 3058080 - 3057550 - | hypothetical protein STY3193 3059809 - 3058163 - | integrase STY3194 3060849 - 3060097 - | lipoprotein TERM 4045 3060537 - 3060554 + g 72 -4.1 -4.76123 | opp_overlap 3060523, overlap 3060521 3060536 ATGACGGTCTGACCG CAGCAGT TTTT GTTGCTG TTTTATTGCTGGTTT TERM 4046 3061075 - 3061098 + H 84 -8.1 -4.67038 | opp_overlap 3061075 GATCGTCTGAGTATA TGGCCTGGC CATGCT GCCGGGTCA TTTTAATTTTCAGGA TERM 4047 3061299 - 3061288 - g 71 -5.8 -4.24342 | TCGCTGAGCAAGAAA GCCT GGCC AGGC GTGTGGACGAATTCG STY3195 3061120 - 3061665 + | isopentenyl-diphosphate delta-isomerase TERM 4048 3061694 - 3061740 + T 74 -8.2 -3.90744 | gap 3, opp_overlap 3061697 3061699 3061701, overlap 3061700 3061701 GCGCTACGTCTGAAC GAAG-AGA-TGCCGGATGGCGGC TAAT GCC-CCATCCGGCAATTTACATC TTATTTCACCGGACG TERM 4049 3061733 - 3061699 - T 74 -10.7 -3.24032 | gap 1, opp_overlap 3061694 3061700 3061701, overlap 3061697 3061701 ACGTCTGAACGAAGA GATGCCGGATGGCGGC TAAT GCC-CCATCCGGCAAT TTACATCTTATTTCA TERM 4050 3061700 - 3061732 + T 100 -14.2 -3.82865 | gap 1, opp_overlap 3061699 3061697 3061701, overlap 3061694 3061701 CGTCTGAACGAAGAG ATGCCGGATGGCGGC TAAT GCC-CCATCCGGCAA TTTACATCTTATTTC TERM 4051 3061731 - 3061701 - T 100 -17.7 -3.18366 | gap 1, opp_overlap 3061701 3061700 3061694, overlap 3061699 3061697 GTCTGAACGAAGAGA TGCCGGATGGCGGC TAAT GCC-CCATCCGGCA ATTTACATCTTATTT TERM 4052 3061701 - 3061731 + T 100 -17.7 -2.88634 | gap 1, opp_overlap 3061699 3061697 3061701, overlap 3061700 3061694 GTCTGAACGAAGAGA TGCCGGATGGCGGC TAAT GCC-CCATCCGGCA ATTTACATCTTATTT lysS 3063258 - 3061741 - | lysyl-tRNA synthetase prfB 3064366 - 3063268 - | peptide chain release factor 2 TERM 4053 3063327 - 3063361 + g 80 -12.3 -3.44848 | gap 1, overlap 3063324 3063326 TACCGTCCAGTACCG CCTGTGTATTGCGGGT TTCC ACCC-CAGTACGCAGG TCTTTAATGCGGGAA TERM 4054 3064359 - 3064373 + g 74 -2.8 -4.96996 | TTCACCGGGTTAATT TCAAAC ATG GTCTGA TTTCTTTTATTTGAC recJ 3066204 - 3064471 - | ssDNA exonuclease RecJ dsbC 3066923 - 3066210 - | thiol:disulfide interchange protein DsbC TERM 4055 3066406 - 3066419 + g 77 -3.8 -5.0707 | overlap 3066413 CCCTTACCTGCCATG GCGT CATCAA ACGC TTTGTTTTTGTCTTT TERM 4056 3066413 - 3066423 + g 81 -4 -5.19879 | overlap 3066406 CTGCCATGGCGTCAT CAAA CGC TTTG TTTTTGTCTTTGGCG xerD 3067843 - 3066947 - | site-specific tyrosine recombinase XerD TERM 4057 3067614 - 3067601 - G 75 -5.9 -4.59109 | CAGATGCTGGAAAAA GCGCC GCAT AGCGC TTAACAGGCGTGCGG fldB 3067956 - 3068477 + | flavodoxin FldB STY3202 3068889 - 3068542 - | hypothetical protein STY3203 3069190 - 3068924 - | hypothetical protein STY3204 3069440 - 3070420 + | putative global regulator STY3205 3071195 - 3070536 - | hypothetical protein TERM 4058 3071023 - 3071006 - G 80 -4.8 -5.10461 | TTGAGGCAAGAAAAA GCAGGA TCATGC TCCCGC CATATAAACTGTAGC TERM 4059 3071290 - 3071304 + r 72 -5.8 -4.44667 | opp_overlap 3071301, overlap 3071301 GCTAAAATAAATTCG CAAAAT TAA ATTTTG TTTATTATTCAACAA STY3206 3071670 - 3071359 - | hypothetical protein bglA 3071829 - 3073262 + | 6-phospho-beta-glucosidase TERM 4060 3073270 - 3073297 + T 75 -9.8 -3.55548 | overlap 3073271 3073288 AGCTTTAACTCCTGC ACGTTACCCGCC AGTC GGCGGGTAACAC TTTGAACGAGTCTTA TERM 4061 3073271 - 3073296 + T 81 -13.3 -2.73007 | overlap 3073270 3073288 GCTTTAACTCCTGCA CGTTACCCGCC AGTC GGCGGGTAACA CTTTGAACGAGTCTT STY3208 3074149 - 3073310 - | hypothetical protein TERM 4062 3073491 - 3073504 + g 78 -2.3 -5.26875 | TGGTTATTAATTACG CTGCC ATTA GACAG TTTTTTCGTTCCAGA TERM 4063 3073881 - 3073897 + g 70 -5.1 -4.5032 | overlap 3073882 CCCTCTATGTGCTCA GGAGACA GAT TGTCTCG TTTGTTATTGATATA TERM 4064 3074440 - 3074424 - R 71 -3.7 -4.76892 | overlap 3074428 ACAGCAAGGTAAAAA TGATGCA CAA TGAATCA TTAGGCTCTAAAAAA TERM 4065 3074633 - 3074620 - R 87 -9.5 -4.24123 | opp_overlap 3074620 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAAACAGTCG TERM 4066 3074620 - 3074633 + r 75 -9.5 -3.53444 | opp_overlap 3074620 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAAACAGTCG gcvP 3077532 - 3074659 - | glycine dehydrogenase gcvH 3078087 - 3077695 - | glycine cleavage system protein H gcvT 3079204 - 3078110 - | glycine cleavage system aminomethyltransferase T TERM 4067 3079171 - 3079146 - G 71 -6.1 -4.28548 | gap 1, opp_overlap 3079147 3079159, overlap 3079147 3079150 ATCCAGCCATGAAAA TCGACCATGCGG GCG CCGCATAG-CGT GTGTTGTTCGTACAA STY3212 3080861 - 3079659 - | hypothetical protein TERM 4068 3080387 - 3080411 + g 77 -8.6 -4.13767 | gap 1, opp_overlap 3080389, overlap 3080405 CCGCGGCAATCACCA GAC-GCGCGGT TAAC ATCGCGCCGTC TTTTAAAGTCAGGAA TERM 4069 3080966 - 3080908 - R 100 -16.4 -3.30124 | gap 2, opp_overlap 3080899 3080898 3080909 3080910, overlap 3080895 3080909 3080946 CCGTAGGCCGGATAA GGCGTTTACGCCGCCATCCGGCAT TTTTACGAACACG ATGCCGGATGGCGGCGTAAACG-- CCTTATCCGGCCTAC TERM 4070 3080909 - 3080967 + r 100 -32.8 -2.57931 | opp_overlap 3080895 3080908 3080909 3080946, overlap 3080899 3080898 3080910 CGTAGGCCGGATAAG GCGTTTACGCCGCCATCCGGCATTTT TACGAAC ACGATGCCGGATGGCGGCGTAAACGC CTTATCCGGCCTACA TERM 4071 3080967 - 3080909 - R 100 -30.7 -2.57931 | opp_overlap 3080899 3080898 3080909 3080910, overlap 3080895 3080908 3080946 CGTAGGCCGGATAAG GCGTTTACGCCGCCATCCGGCAT TTTTACGAACACG ATGCCGGATGGCGGCGTAAACGC CTTATCCGGCCTACA TERM 4072 3080910 - 3080968 + r 100 -18.5 -3.30124 | gap 2, opp_overlap 3080895 3080908 3080909 3080946, overlap 3080899 3080898 3080909 GTAGGCCGGATAAGG --CGTTTACGCCGCCATCCGGCATTTT TACGAAC ACGATGCCGGATGGCGGCGTAAACGCC TTATCCGGCCTACAG visB 3082168 - 3080990 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 3083481 - 3082165 - | proline aminopeptidase P II TERM 4073 3083430 - 3083410 - G 75 -12.5 -2.60496 | opp_overlap 3083409 3083409 3083412, overlap 3083409 3083407 3083412 CGGCGCGGCAAAGAT CAGCGCGGC GCT GCCGGGCTG CATTTGCGCCAGTAA TERM 4074 3083481 - 3083499 + g 91 -3.8 -5.5353 | overlap 3083482 ATTCCTGCTGAGTCA TGACATGG CCT CCATTTCG TTTTTTCTTAGTGTA STY3215 3084085 - 3083507 - | hypothetical protein TERM 4075 3083765 - 3083753 - G 77 -4.8 -4.87291 | GAGGCCAAGCAAAAA GTGG TTAAC CCAC CCGGCTAATGCATCT TERM 4076 3083849 - 3083833 - G 70 -2.9 -4.72486 | opp_overlap 3083837, overlap 3083837 3083839 GATAAAGCTGAAAAA GAAAGCC GTC GTCTTCC AGCGCGTCGCTGGTC TERM 4077 3083873 - 3083837 - G 80 -5 -4.88293 | opp_overlap 3083837 3083852, overlap 3083833 3083839 AAGCTGAAAAAGAAA GC-CGTCGTCTTCCAGCG CGT CGCTGGTCGCCG-CGTGC ATTTTGCGCAGCGCC TERM 4078 3084470 - 3084459 - g 72 -3.6 -4.77157 | overlap 3084466 3084467 TTAACTCAGGAAAAA GCGA AGAC CCGC GATTACGCGGCGAGC STY3216 3084252 - 3084581 + | Z-ring-associated protein STY3217 3084875 - 3085423 + | putative ligase TERM 4079 3085594 - 3085613 + T 86 -11.4 -3.71649 | overlap 3085609 CCTTTCCTTTTTAGA GCCCCTGC CTCG GTAGGGGC TTTCCCGTTTCAGCG TERM 4080 3085771 - 3085792 + T 86 -11.6 -3.54459 | opp_overlap 3085769 3085768 3085771 AAACCAGAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGAGGAAATTAG TERM 4081 3085792 - 3085771 - T 78 -11.6 -3.0955 | opp_overlap 3085771, overlap 3085769 3085768 AAACCAGAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGAGGAAATTAG serA 3087036 - 3085804 - | D-3-phosphoglycerate dehydrogenase rpiA 3087961 - 3087302 - | ribose-5-phosphate isomerase A TERM 4082 3088525 - 3088499 - g 74 -8.1 -3.92592 | gap 2 AGGTGGAAGATGAAA CGCGCACGCAAGA ACG TCT-GCGT-CGCG GCGAGGTGGTGGGCG iciA 3088114 - 3089007 + | chromosome replication initiation inhibitor protein TERM 4083 3089267 - 3089242 - T 100 -12.5 -4.39828 | overlap 3089244 AACACCGGGAGAAAA CGCGGCCTGGA AGCG CCCAGGCCGGG CGAGATTACTGCGTG TERM 4084 3089265 - 3089244 - T 83 -13.7 -2.53422 | overlap 3089242 CACCGGGAGAAAACG CGGCCTGGA AGCG CCCAGGCCG GGCGAGATTACTGCG STY3221 3090019 - 3089273 - | hypothetical protein STY3222 3090748 - 3090113 - | arginine exporter protein STY3223 3091809 - 3090949 - | mechanosensitive channel MscS TERM 4085 3091071 - 3091082 + g 71 -5.8 -4.25104 | CCCAATAGACATTTT GCAG GTCG CTGC TTTTACTCCAGACAC TERM 4086 3092020 - 3091996 - R 90 -9.9 -4.4204 | opp_overlap 3091999, overlap 3091998 3091999 AATAACGATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAGATGCGCCTGT TERM 4087 3092018 - 3091998 - R 93 -12.5 -3.79611 | opp_overlap 3091999, overlap 3091996 3091999 TAACGATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAGATGCGCCT TERM 4088 3092017 - 3091999 - R 93 -16 -2.86682 | opp_overlap 3091999, overlap 3091998 3091996 AACGATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC TERM 4089 3091999 - 3092017 + r 100 -16 -4.62069 | opp_overlap 3091999 3091998 3091996 AACGATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC tnpA 3092557 - 3092099 - | transposase for insertion sequence element IS200 TERM 4090 3092670 - 3092688 + r 100 -16 -4.18018 | opp_overlap 3092660 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 4091 3092727 - 3092708 - R 100 -12.2 -5.76633 | opp_overlap 3092708 CCATAGACAAAAAAA TGGCTTCC CGAG GGAAGCCA TTTCAATCAGCAGAC TERM 4092 3092708 - 3092727 + r 88 -12.2 -3.64703 | opp_overlap 3092708 CCATAGACAAAAAAA TGGCTTCC CGAG GGAAGCCA TTTCAATCAGCAGAC fba 3093826 - 3092747 - | fructose-bisphosphate aldolase TERM 4093 3093877 - 3093864 - R 72 -3.1 -5.00616 | gap 1, overlap 3093867 GGCTTTGGGAAAAAA CACGGG CCG CCC-TG AATGTCAGATCGGCG TERM 4094 3093924 - 3093898 - R 80 -9.5 -3.87373 | gap 1, opp_overlap 3093898 3093921, overlap 3093902 CAGATCGGCGATAAA TCAACGGGCAGG AATC CCTGCCCGT-AA CGATTACTTCTTAGC TERM 4095 3093921 - 3093902 - R 100 -15 -3.6053 | opp_overlap 3093898, overlap 3093898 TCGGCGATAAATCAA CGGGCAGG AATC CCTGCCCG TAACGATTACTTCTT pgk 3095091 - 3093928 - | phosphoglycerate kinase TERM 4096 3094715 - 3094731 + g 74 -4.3 -4.69559 | GCGGCATATTTTTTA GACAGCG CTT CGTCGTC TTTCTTTTCGCCTTT TERM 4097 3094989 - 3094976 - G 71 -9.5 -3.48395 | opp_overlap 3094968 3094964 ATGGTCGGCAGAGAA GCGCG GATA CGCGC GTCGCTGGTCACTTT TERM 4098 3095056 - 3095046 - G 72 -2.4 -4.87665 | opp_overlap 3095054 CCGCACGGATAAAAA CGCG TTT CCCG GCCAGATCCAGATCG epd 3096159 - 3095113 - | erythrose 4-phosphate dehydrogenase TERM 4099 3095770 - 3095757 - G 71 -4.5 -4.62069 | overlap 3095758 GGTTCACGCCAAAAA CGACG GTGG CGTCA AGATCGTTGCTGCCC STY3229 3096533 - 3096958 + | hypothetical protein TERM 4100 3097195 - 3097227 + G 80 -12 -3.40299 | GGCTGCTTACCGACC CTATCGCTGCCGCG TTTGC CCCGGTAGCGATGG TTATCGGTCTGGTCG STY3230 3096984 - 3097562 + | hypothetical protein STY3231 3097596 - 3098270 + | hypothetical protein TERM 4101 3098301 - 3098316 + G 71 -4.6 -4.55798 | TTCCGTCCGATGCGA CACGCC CGCC GGCATG TTTTGATTTCCACTA STY3232 3098252 - 3098935 + | ABC transporter ATP-binding protein TERM 4102 3099478 - 3099529 + G 83 -15.4 -2.53903 | gap 3, opp_overlap 3099491, overlap 3099488 3099488 3099491 3099510 CTGGCGACATGCCGG GCACGGG-GAAC-CAGCGTCGTGGC GATTA GCCATGACGCTGCGTTTACCCG-GC GTCATTTTTCCCGGG TERM 4103 3099488 - 3099519 + G 85 -13.1 -3.5393 | gap 1, opp_overlap 3099491, overlap 3099478 3099488 3099491 3099510 GCCGGGCACGGGGAA C-CAGCGTCGTGGC GATTA GCCATGACGCTGCG TTTACCCGGCGTCAT TERM 4104 3099488 - 3099518 + G 79 -13.3 -2.72144 | opp_overlap 3099491, overlap 3099488 3099478 3099491 3099510 GCCGGGCACGGGGAA CCAGCGTCGTGGC GATTA GCCATGACGCTGC GTTTACCCGGCGTCA TERM 4105 3099491 - 3099515 + G 78 -13.6 -2.64155 | opp_overlap 3099491, overlap 3099488 3099488 3099478 3099510 GGGCACGGGGAACCA GCGTCGTGGC GATTA GCCATGACGC TGCGTTTACCCGGCG TERM 4106 3099510 - 3099533 + G 89 -8.8 -4.58663 | opp_overlap 3099491, overlap 3099491 3099488 3099488 3099478 CGTGGCGATTAGCCA TGACGCTGCG TTTA CCCGGCGTCA TTTTTCCCGGGTGGT STY3233 3098929 - 3099585 + | ABC transporter ATP-binding protein TERM 4107 3099611 - 3099587 - T 83 -9.9 -4.19371 | opp_overlap 3099590, overlap 3099589 3099590 CAAAGGGGGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 4108 3099609 - 3099589 - T 93 -12.5 -3.68725 | opp_overlap 3099590, overlap 3099587 3099590 AAGGGGGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 4109 3099608 - 3099590 - T 93 -16 -2.80512 | opp_overlap 3099590, overlap 3099589 3099587 AGGGGGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 4110 3099590 - 3099608 + T 100 -16 -4.91109 | opp_overlap 3099589 3099587 3099590 AGGGGGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 3100148 - 3099690 - | transposase for insertion sequence element IS200 TERM 4111 3100261 - 3100279 + r 100 -16 -4.18018 | opp_overlap 3100251 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 4112 3100324 - 3100291 - R 100 -18.3 -2.87132 | opp_overlap 3100298, overlap 3100298 GGGGTTTTCCATAGA CAAAAAACGGGTCGC CGAA GCGACCCGTTTTATG CCGTATTAAGGATTA TERM 4113 3100317 - 3100298 - R 100 -15 -5.4251 | opp_overlap 3100298, overlap 3100291 TCCATAGACAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCGTATTA TERM 4114 3100298 - 3100317 + r 100 -15 -4.42619 | opp_overlap 3100291 3100298 TCCATAGACAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCGTATTA tktA 3102328 - 3100337 - | transketolase TERM 4115 3101508 - 3101566 + g 83 -9.5 -4.15044 | gap 2, overlap 3101505 3101509 CAGCCCAACTGTTCG C-GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCCTG TTTGTTCGGCGAACC TERM 4116 3101509 - 3101564 + g 89 -13.2 -3.6761 | gap 1, overlap 3101505 3101508 AGCCCAACTGTTCGC GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCC TGTTTGTTCGGCGAA TERM 4117 3102799 - 3102788 - g 73 -5.8 -4.38313 | overlap 3102781 3102789 ACAGCAAAGCGAAAA TCGC GCCG GCGA GCAGCGAATACACTA TERM 4118 3102838 - 3102817 - g 71 -7.3 -3.93664 | gap 1 AGCGAATACACTAAA CGACTGGCAA AAA TTGCC-GCCG CGCTGGGGGATAACA TERM 4119 3103161 - 3103138 - g 71 -4.6 -4.57073 | gap 1 GATCTTGGCGAAAAA CTG-GTGAACT CGC AGTTCTCTCAG CGTCAGGAGTCCGAA STY3237 3102604 - 3103362 + | hypothetical protein speB 3104383 - 3103463 - | agmatinase TERM 4120 3104038 - 3104050 + g 71 -4.8 -4.59773 | AGAGCATACGCTTGC CTGC AGACA GCAG TTTTTCAGCGTGCGC TERM 4121 3104464 - 3104430 - R 100 -13.6 -5.62219 | opp_overlap 3104426 3104430 AACAGATGAAAAAAA TCCCCTCCGCGTCG TTAAACC CGACGAGGAAGGGA TTGATTTGTAAATCG TERM 4122 3104430 - 3104464 + r 82 -11.4 -3.61988 | opp_overlap 3104430, overlap 3104426 AACAGATGAAAAAAA TCCCCTCCGCGTCG TTAAACC CGACGAGGAAGGGA TTGATTTGTAAATCG speA 3106587 - 3104611 - | arginine decarboxylase TERM 4123 3104917 - 3104905 - G 80 -9.1 -4.11183 | opp_overlap 3104903, overlap 3104902 GCCGACCATAAAGAA GCCGA GCA TCGGC GGATTCTCTGGATCG TERM 4124 3105728 - 3105713 - G 77 -8.2 -4.21142 | overlap 3105714 AGCTCAACATAGAAA CGCGCG GACT CGCGCA CGCCGGTCGCGATAT STY3241 3106727 - 3106596 - | hypothetical protein TERM 4125 3106803 - 3106786 - H 75 -6.3 -4.52703 | opp_overlap 3106798, overlap 3106776 GAAACCACGAGAAAA CTCTTGC GTTA ACAAGAG CGCCCTTGTTCAGTC TERM 4126 3107040 - 3107064 + G 70 -5 -4.52589 | gap 1, overlap 3107044 ACCCGGCTGGAAGTG GCGACACGAAG AAAA CGTCGTGT-GC TTTTGTATGAGCCGC TERM 4127 3107077 - 3107087 + G 81 -8.2 -4.36914 | TGCTTTTGTATGAGC CGCG CGT CGCG TTTTATACCCAGAAC STY3242 3107037 - 3107228 + | hypothetical protein TERM 4128 3107853 - 3107841 - g 83 -7.7 -4.59853 | opp_overlap 3107841, overlap 3107843 TGAAGTGCGTAAAAA TGGCA CCC TGCCA TGGTTGCGTCCGGAT TERM 4129 3108510 - 3108496 - g 74 -7.8 -4.11869 | GAAAAAACCGACAAA GCGCAA CTG CTGCGC GATGCTGCCGGTCTG metK 3107377 - 3108531 + | S-adenosylmethionine synthetase TERM 4130 3108604 - 3108586 - f 79 -11.7 -3.18582 | opp_overlap 3108586 TACCGTACTTATCAA GGCCAGC GCCCT GCTGGCC TTTATCATTGCTGAT TERM 4131 3108586 - 3108604 + F 95 -12.4 -4.08546 | opp_overlap 3108586 TACCGTACTTATCAA GGCCAGCG CCC TGCTGGCC TTTATCATTGCTGAT TERM 4132 3109287 - 3109274 - g 84 -3.1 -5.40072 | gap 1 TGGGTCGTAAAAAAA GCCTGA TGA TC-GGC GCTATCCTGTTCGTC TERM 4133 3109619 - 3109631 + G 76 -10.5 -3.69323 | GCCCGCGCTGGTTTG CGGCG AAA CGCCG TTTCCATGATGCTGA galP 3109024 - 3110418 + | galactose-proton symport (galactose transporter) TERM 4134 3110427 - 3110453 + F 100 -21 -5.08601 | CGACTAATCCCTCCA CGCTTCCTCCTG CCA CAGGAGGAAGCG TTTTTCTTGCAGTCC STY3245 3110497 - 3110994 + | hypothetical protein TERM 4135 3110994 - 3111015 + F 72 -8.7 -3.72695 | opp_overlap 3111005 ACTGGTCGCCGGGTA GTTCCCCGA AACG TCCGGGAAC TTTCCTGAGCGGACT endA 3111090 - 3111797 + | endonuclease I TERM 4136 3112290 - 3112254 - g 77 -3.6 -5.06816 | gap 1, overlap 3112255 3112256 ACGTCTGAACAAAAA GC-GCCAGCAGTGGCAA AAGA TCGCCATCGCCGCCTGC GAACAATGCGGGCGT STY3247 3111874 - 3112605 + | hypothetical protein TERM 4137 3113118 - 3113132 + G 74 -7.8 -4.14392 | AACCGCTGGACGGTA TGGGCG GCG CGTCCA TTTTCCGCGTTAAGG TERM 4138 3113411 - 3113426 + G 74 -3.2 -4.89852 | GTTGGACCAACGCTT AAAGCC AAAG GGCTTA TTTTTGTCGGTCTGG gshB 3112625 - 3113572 + | glutathione synthetase TERM 4139 3113685 - 3113707 + F 79 -10.6 -3.51924 | opp_overlap 3113681 3113682, overlap 3113660 3113681 TTGCCCGATAAGGCC GCCGTCCTTT GGC AAAAGACGGC TTATATGAGTGACAA STY3249 3113788 - 3114351 + | hypothetical protein TERM 4140 3114403 - 3114391 - g 70 -3.3 -4.83169 | ACTTCGGCACAAAAA GCATC GGC GTTGC AATAGGACAACGCAT TERM 4141 3114539 - 3114501 - g 71 -9.5 -3.53761 | GAACGTTTGCTGAAA GAGTGGCAGCCGGACGA AATTA TTGTCGGGCTACCGCTC AATATGGATGGCACT STY3250 3114351 - 3114767 + | Holliday junction resolvase-like protein kdgR 3115500 - 3114814 - | global regulatory protein pilT 3116610 - 3115630 - | Type II secretion, ATP-binding, protein TERM 4142 3116062 - 3116044 - G 72 -11.6 -3.06183 | GGGATCTTCACGTAA CGCCGCGC GCA GCCCGGCG GCAAAAGTGGCGCAA TERM 4143 3116393 - 3116369 - G 78 -13.5 -2.52896 | TGATGTGTGAACGCA CTGGCGCGCAG GCG CCGCGTGCCAG ACAGCGAGACGGCGA TERM 4144 3116685 - 3116671 - g 70 -5.6 -4.38154 | opp_overlap 3116678 3116679 ACATCCGGGACAAAA TCTCCG CCG CGGCGA CGCGTTGTGGCCGCT TERM 4145 3116761 - 3116742 - g 71 -5.7 -4.23781 | overlap 3116743 GTGAGTAAAACCAAA CCTGCGA GCGACA TCGCAGA AGCCATTGCCGCCGG TERM 4146 3116854 - 3116824 - g 74 -2.5 -5.00884 | opp_overlap 3116811, overlap 3116811 3116825 AGGGGGTGGAAAAAA TCCGCCACTTTCA GGAAG CGAAAGTGGAAGG CCTGCACTGGCACTT STY3253 3116628 - 3117332 + | hypothetical protein STY3254 3117351 - 3117917 + | hypothetical protein STY3255 3117914 - 3118204 + | hypothetical protein TERM 4147 3118266 - 3118279 + G 70 -6.7 -4.21098 | opp_overlap 3118251, overlap 3118251 GTGCGCGAGCTCGCG TCGCT GTTA AGCGA TTTTGGGCTTGATGT TERM 4148 3118772 - 3118744 - g 91 -3.7 -5.4505 | opp_overlap 3118771, overlap 3118746 3118768 CCCGTGAAGAAAAAA GCGCGATTTCCCA CCG TGGACAAGCGCTC AAGCTGCTGCTGGAT STY3256 3118212 - 3118805 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 4149 3119872 - 3119895 + G 73 -5.3 -4.6644 | opp_overlap 3119857 3119879 TGCGAGCAATACTGG CAGATTACC CGTCAC GGTAAACTG TTTTTAAACTCTCTT STY3257 3118798 - 3119934 + | coproporphyrinogen III oxidase TERM 4150 3119989 - 3119938 - T 95 -12.5 -3.9461 | gap 3, opp_overlap 3119988, overlap 3119939 3119941 CTCGCGGAATAACAA GGATAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTA-CC GACCTGTGGCGGTTA TERM 4151 3119989 - 3119939 - T 88 -14.9 -2.96444 | gap 2, opp_overlap 3119988, overlap 3119938 3119941 TCGCGGAATAACAAG GATAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTACC GACCTGTGGCGGTTA TERM 4152 3119987 - 3119941 - T 85 -13.9 -3.03309 | gap 2, overlap 3119938 3119939 GCGGAATAACAAGGA TAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTA CCGACCTGTGGCGGT STY3258 3121032 - 3120025 - | hypothetical protein TERM 4153 3120483 - 3120494 + g 74 -4.4 -4.77165 | CGTCCGCTTCTTTTT TAGC TACC GCTA TTTTCTTATCCAGGG TERM 4154 3120898 - 3120933 + g 70 -7 -4.2142 | gap 1, opp_overlap 3120900 TAAGGTAATGGAATC CAGTTTAAGTATGCCGT GGT ACTGCTTAC-TAAACTG TTCTTTTAAGATGTT TERM 4155 3121158 - 3121134 - R 73 -10 -3.34715 | gap 1, opp_overlap 3121135 3121136, overlap 3121132 3121135 GAGGTCTTCCAAAGA TGGCCCCGGCC TTCC GACCGGGGC-A TTATCTTTAATACTG TERM 4156 3121135 - 3121158 + r 77 -9.4 -3.87323 | opp_overlap 3121134 3121135 3121132, overlap 3121136 AGGTCTTCCAAAGAT GGCCCCGGCC TTCC GACCGGGGCA TTATCTTTAATACTG TERM 4157 3121158 - 3121135 - R 76 -11.6 -2.60615 | opp_overlap 3121135 3121136, overlap 3121134 3121132 AGGTCTTCCAAAGAT GGCCCCGGCC TTCC GACCGGGGCA TTATCTTTAATACTG TERM 4158 3121136 - 3121157 + r 82 -12.9 -2.91671 | opp_overlap 3121134 3121135 3121132, overlap 3121135 GGTCTTCCAAAGATG GCCCCGGCC TTCC GACCGGGGC ATTATCTTTAATACT ansB 3122211 - 3121165 - | L-asparaginase II TERM 4159 3121517 - 3121497 - G 71 -7.5 -3.95073 | TCGCATAGTTATAAA CGATACCGA CTT TCGGCAACG CGGTCAGCTTCGACA TERM 4160 3122359 - 3122381 + H 95 -12 -3.92996 | opp_overlap 3122360, overlap 3122360 AAAAACAGAATAAAA AGGCGCAGAT ACG ATCTGCGCCA TTGTTGTCTATGGAA TERM 4161 3122380 - 3122360 - H 100 -15.5 -5.35365 | opp_overlap 3122360 3122359 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTGCGCC ATTGTTGTCTATGGA TERM 4162 3122360 - 3122380 + H 93 -15.5 -2.95316 | opp_overlap 3122360, overlap 3122359 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTGCGCC ATTGTTGTCTATGGA TERM 4163 3122417 - 3122399 - H 100 -16 -4.18018 | opp_overlap 3122388 3122389 GTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTT tnpA 3122530 - 3122988 + | transposase for insertion sequence element is200 TERM 4164 3123067 - 3123091 + T 90 -9.9 -4.41348 | opp_overlap 3123070, overlap 3123069 3123070 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTAAAAAGGA TERM 4165 3123069 - 3123089 + T 93 -12.5 -3.81557 | opp_overlap 3123070, overlap 3123067 3123070 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTAAAAAG TERM 4166 3123088 - 3123070 - T 100 -16 -4.91109 | opp_overlap 3123070 3123069 3123067 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTAAAAA TERM 4167 3123070 - 3123088 + T 93 -16 -2.88452 | opp_overlap 3123070, overlap 3123069 3123067 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTAAAAA STY3262 3123830 - 3123111 - | hypothetical protein TERM 4168 3123852 - 3123871 + r 73 -10.6 -3.03203 | opp_overlap 3123851 3123850 CCCTCAAGACAAAGC GGGCCGGC ATTT GCCGACCC TGTACTTATTAGTCC STY3263 3124206 - 3123880 - | hypothetical protein TERM 4169 3124028 - 3124044 + g 70 -6.5 -4.18488 | CAGGCCAGGTAGCCG CTGCCGT CAA ACGCCAG TTTATTAGGCTCAAT trmB 3124925 - 3124206 - | tRNA (guanine-N(7))-methyltransferase TERM 4170 3125594 - 3125615 + G 74 -6.5 -4.25283 | gap 1, opp_overlap 3125594 TGAGCGAGCAAGTGA CGCCCGCACG CGG CGTG-GAGCG TTTTAATCAGGCGAT mutY 3125080 - 3126132 + | adenine DNA glycosylase TERM 4171 3126343 - 3126321 - g 77 -4.1 -4.99861 | GATTAACGAGAAAAA GCTCAACAT GATGA ACGCCGAGC ACCGTAAACTGCTGG STY3266 3126160 - 3126435 + | hypothetical protein TERM 4172 3127052 - 3127035 - g 80 -9.1 -4.08945 | opp_overlap 3127049, overlap 3127036 3127047 ATTACTTGCTGAAAA CGCGGCT CAAA AGCCGCA GTAACGGCCTGCGTA mltC 3126548 - 3127633 + | murein transglycosylase C nupG 3127850 - 3129106 + | nucleoside permease TERM 4173 3129116 - 3129167 + F 100 -18.3 -3.51708 | gap 2, overlap 3129117 CATTAATCCTTGCCC TGTT-TC-GCAGGCCGGATAAGGCG TAAA TGCCTTATCCGGCCTGCAGGCAACG TTACTTTAAAACATA TERM 4174 3129117 - 3129166 + F 100 -19.6 -2.70704 | gap 2, overlap 3129116 ATTAATCCTTGCCCT GTT-TC-GCAGGCCGGATAAGGCG TAAA TGCCTTATCCGGCCTGCAGGCAAC GTTACTTTAAAACAT TERM 4175 3129477 - 3129488 + F 74 -5.8 -4.60889 | CGGCAGGCTTTCTTT GCGA AACA TCGC TTTTTGCAGATCCTT TERM 4176 3130197 - 3130184 - f 72 -5.2 -4.56597 | overlap 3130165 3130164 TTGTGCGGGCAAAAA CGCG CCTGGC CGCG AATATGGTTATCTTT TERM 4177 3131398 - 3131428 + F 73 -9.9 -3.41602 | opp_overlap 3131397 3131400 3131407 CCGACCGCCAGACAT CAGTAAAAACAGA CTGTT TCTGATTTTACTG TTGTCCTGCAGTGAG TERM 4178 3131419 - 3131407 - f 71 -3.4 -4.79826 | opp_overlap 3131398, overlap 3131400 3131397 AGACATCAGTAAAAA CAGA CTGTT TCTG ATTTTACTGTTGTCC TERM 4179 3131914 - 3131929 + G 72 -2.4 -4.93877 | overlap 3131900 3131916 GGCGACGCTGGTCGG CGCGCT TATC GGCGAG TTTTGTTTGCTGGAA TERM 4180 3132180 - 3132194 + G 77 -11.4 -3.53563 | overlap 3132175 CCTGTTCGCTTGGCA TCGCCG TTT CGGCGA TTTGCGCACCGATGT TERM 4181 3132397 - 3132412 + G 74 -2.4 -5.09895 | overlap 3132397 3132396 GGCGATGCCGATCTC CGCCGC ATGG GCGATG TTTTTTGCCTGACTC yqgA 3131717 - 3132424 + | hypothetical protein TERM 4182 3132572 - 3132556 - f 73 -10.9 -2.62616 | opp_overlap 3132555 3132554 3132551 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 4183 3132797 - 3132787 - f 71 -6.8 -4.11304 | TTAACCGACAAACAA GCAC GTA GTGC AAAGCCTTCTGATAA TERM 4184 3133442 - 3133430 - f 72 -10.5 -2.89659 | overlap 3133429 GACACCTACAACAAG GCCGG ATA CCGGC TATCAACACTTTCCG TERM 4185 3133612 - 3133640 + F 100 -13.2 -4.82901 | opp_overlap 3133609 3133612 ATAAGAGTAAATCCA CAGCATTCCGCC TTAAT GGTGGGATGCTG TTTTTGTCCGGGAAC STY3277 3133828 - 3133947 + | hypothetical protein TERM 4186 3133985 - 3133965 - f 78 -4.7 -4.946 | overlap 3133970 ATGAAAGACTAAAAA CACCAGATG ATG CATCCAATG ATAGCATTAAATCAG STY3278 3134156 - 3134344 + | hypothetical protein STY3279 3134334 - 3134630 + | hypothetical protein TERM 4187 3135248 - 3135261 + G 70 -6.7 -4.08216 | opp_overlap 3135236 GAATGGAGAGAATCT CAAGG ATTG CCTTG TTTTAAGAAAAGTAA STY3281 3135014 - 3135280 + | bacteriocin immunity protein TERM 4188 3135551 - 3135537 - g 86 -3.6 -5.29385 | AATGGAACTAAAAAA TAACCT TGA AGATTA TACAGAAGATGAGTT STY3283 3135523 - 3135801 + | bacteriocin immunity protein STY3285 3136204 - 3136707 + | hypothetical protein STY3287 3136966 - 3137151 + | hypothetical protein STY3288 3137348 - 3137878 + | hypothetical protein STY3289 3137880 - 3138506 + | hypothetical protein STY3290 3138812 - 3138642 - | hypothetical protein TERM 4189 3138725 - 3138739 + g 74 -2.9 -4.85599 | TTTTTCTGTTCCACT TGATA ATATG TATCA TTTTTATCAGGTCAG TERM 4190 3139022 - 3138999 - g 86 -3.8 -5.42862 | opp_overlap 3139002, overlap 3139002 ATATGCTCAAAAAAA TCATTGGCGC TCTC GCGTCAATTA TTGGCGGGCTACTTG TERM 4191 3139026 - 3139038 + G 89 -3.3 -5.4492 | TCGCGTCAATTATTG GCGGG CTA CTTGC TTTTTTATGTGTCTA STY3291 3138956 - 3139162 + | hypothetical protein STY3292 3139414 - 3139187 - | hypothetical protein TERM 4192 3139426 - 3139445 + H 100 -15 -5.38054 | CCAACCATTCAGATG CGGACGCC CTAT GGCGTCCG TTTTTATTTATAAAA TERM 4193 3139684 - 3139669 - H 76 -9 -3.68435 | overlap 3139667 CGTCTCAAAAGAATA TCGTCC TGAA GGACGA GAACTCACGGCATTT TERM 4194 3139741 - 3139753 + H 77 -3.5 -5.24129 | opp_overlap 3139741 AAAAAATCATATTAA TAATT TTA AATTA TTTTTTATAAAACCA TERM 4195 3140018 - 3140030 + G 84 -3.3 -5.36965 | GCGCAACTCATTCCT CTGTC GTC GGCGG TTTTTTATCGTGTTA STY3293 3139940 - 3140623 + | LysR family transcriptional regulator STY3294 3141252 - 3140728 - | hypothetical protein STY3295 3142762 - 3141263 - | amino acid ABC transporter TERM 4196 3142977 - 3142967 - R 71 -6.8 -4.09805 | opp_overlap 3142965 3142967 TGACGAACAATTAAA GGGT TCA ACCC TGTTTATGGCTTTCA STY3296 3143237 - 3142971 - | hypothetical protein TERM 4197 3143244 - 3143260 + r 76 -9.3 -3.65812 | opp_overlap 3143237 3143213 GTAAATCATCGCAAC GGCGACC TGG GGACGCC TTCTGTTGGCAACGC ordL 3144660 - 3143359 - | putative oxidoreductase TERM 4198 3144758 - 3144724 - H 70 -5.1 -4.386 | opp_overlap 3144724, overlap 3144742 TAACGTTTTACAAAA TATCGTCCGGAAGAA TGACG TTCTTTGGAACGATA TTCAGTTCCAGGCAA TERM 4199 3144833 - 3144856 + G 74 -2.4 -5.00616 | overlap 3144835 TCTGATGAGCGACGT GACATTACTT GCCG AAGTAACGAC TTTTTTACGCCAACG STY3298 3144822 - 3146306 + | aldehyde dehydrogenase STY3300 3147307 - 3146822 - | hypothetical protein TERM 4200 3147859 - 3147848 - R 82 -3 -5.47159 | TGTGAACACAAAAAA TGAT TTAA ATCA AAAAACAAACTATTC STY3302 3148956 - 3148033 - | hypothetical protein STY3303 3149714 - 3148995 - | hydrolase TERM 4201 3149436 - 3149455 + g 73 -6.4 -4.43189 | opp_overlap 3149436 ACCCACCTTTGCAAA TGGCAGTT GAAA AACAGCCA TTTTATCGCCTTCCT TERM 4202 3150172 - 3150150 - R 74 -10.8 -3.27653 | overlap 3150148 ACCCTTACCACAATA TTATTTTCAG CAT CTGAAAATAA TCAGGCAAACTAAAT TERM 4203 3150191 - 3150217 + r 78 -6.5 -4.59773 | opp_overlap 3150193, overlap 3150193 GGCAAACTAAATGAT AACGCGCTGGT ATAAA ACCAACGCGTA TTTTTACCGATAAGG TERM 4204 3150215 - 3150193 - R 86 -11.3 -3.66643 | opp_overlap 3150191 3150193 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4205 3150193 - 3150215 + r 77 -9.1 -3.91506 | opp_overlap 3150193, overlap 3150191 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4206 3150264 - 3150241 - R 85 -12.4 -3.38326 | overlap 3150243 GATAAGGGTAATGAA GACGGCCACC CGAA GGTGGCCGTT AGAACCCGGTAGCGC TERM 4207 3150262 - 3150243 - R 100 -15 -3.25539 | overlap 3150241 TAAGGGTAATGAAGA CGGCCACC CGAA GGTGGCCG TTAGAACCCGGTAGC exuT 3151617 - 3150313 - | hexuronate transporter TERM 4208 3151700 - 3151689 - H 76 -4.4 -5.04325 | opp_overlap 3151693 CTGAAATTACAAAAA TTGG TTGA CCAA TCAATATTTTCTCAT uxuA 3152022 - 3153206 + | mannonate dehydratase TERM 4209 3153214 - 3153238 + F 100 -16.5 -3.62275 | GCAAATAACCTTCTT TCGCATGGCGC GAC GCGTCATGCGA TTTCCCCTACTCAAT TERM 4210 3153755 - 3153710 - g 90 -8.3 -4.74504 | gap 1, opp_overlap 3153724 3153725 ACCGTAACCGAAAAA GGCTACTG-CACCGACCCCGCC AGC GGCGAGCTTGATGTCAATAACC CGCTGATCCAAAACG TERM 4211 3154026 - 3154055 + G 80 -10.1 -4.02022 | gap 1, opp_overlap 3154026 3154034 CAGCGACCGAAGAGA CGCTACAACTGGTT GCC GACCAGTTG-GGCG TTTATGATCCTTGCG uxuB 3153317 - 3154789 + | D-mannonate oxidoreductase TERM 4212 3155745 - 3155757 + G 76 -10.5 -3.76775 | GTTCCGCCTGCTCGG GCCGG ATA CCGGC TTTGACTCTATTGGC uxaC 3154801 - 3156213 + | glucuronate isomerase TERM 4213 3156343 - 3156331 - T 71 -3.4 -4.87665 | opp_overlap 3156331, overlap 3156338 GGCCACCGATAAAAA GCAA AGAGG TTGC TGATTAATCCCGAAT TERM 4214 3156384 - 3156351 - T 100 -16.9 -3.14344 | opp_overlap 3156361, overlap 3156338 GAGGTTGCTGATTAA TCCCGAATCACTTAC TAAG GTAAGTGATTCGGGT AAACAAACACAGCCA STY3309 3157568 - 3156513 - | hypothetical protein TERM 4215 3158225 - 3158189 - R 100 -17.4 -3.81488 | gap 1, overlap 3158191 CGTTGGTAAACACAA CAGGCGGGATATCGGCG CCAA CGCCGATATCCCGAC-G AGAATGACCCCGTTA TERM 4216 3158224 - 3158191 - R 100 -21.1 -3.49232 | overlap 3158189 TTGGTAAACACAACA GGCGGGATATCGGCG CCAA CGCCGATATCCCGAC GAGAATGACCCCGTT gsp 3160094 - 3158238 - | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase TERM 4217 3159379 - 3159392 + g 77 -4.5 -4.83615 | ATAACGTGTCCGTTC GCCTG TACA TAGGC TTTTTGTAACGGATC TERM 4218 3159768 - 3159750 - G 74 -11.6 -3.24747 | TTGCCAGATGAGCAA CGCCCCGG CCT CCGGCGCG CGCGGCGAACCGTTC TERM 4219 3160650 - 3160663 + G 73 -5.2 -4.65895 | opp_overlap 3160650 CGATAACTCATACAA CCCG CCGATT CGGG TTTTTGAGTCGGGCG STY3311 3160321 - 3161187 + | putative glutathione S-transferase YghU TERM 4220 3161227 - 3161195 - T 72 -9.2 -3.63283 | opp_overlap 3161192 3161195 AAAGTTAAACCATAA TGCCGGATGAGG TAGTAATGT CGTCATCCGGCA TGGTATTCCCTGCTG STY3312 3161968 - 3161255 - | hypothetical protein TERM 4221 3161810 - 3161760 - G 88 -11.2 -4.07568 | gap 3, overlap 3161745 CGGTTCGTCGTAAAA GGCGCGACCCGCAGTGC-CCGCCCG CTTT CCAGCAGCGC-CTGCGGAT-GCGCC AGGTTCGCCGAAGCA STY3313 3163017 - 3161965 - | ABC transporter periplasmic-binding protein TERM 4222 3162691 - 3162711 + g 78 -6.7 -4.59773 | opp_overlap 3162688 3162690 CGTGACAAACACCAC CTGCGGGCG CAG CGCCACCAG TTTTTCAGGATCAAC TERM 4223 3163002 - 3162982 - G 80 -9.7 -3.96447 | CCAGCAAAAAAGCAA CGCCAGC AGAGAGA GCTGGCG CAAAAATTTATTCAT hybG 3163341 - 3163093 - | hydrogenase 2 accessory protein HypG hypA 3163710 - 3163369 - | hydrogenase nickel incorporation protein HybF hybE 3164191 - 3163703 - | hydrogenase 2-specific chaperone hybD 3164678 - 3164184 - | hydrogenase 2 maturation endopeptidase TERM 4224 3164264 - 3164243 - G 71 -10.2 -3.16881 | opp_overlap 3164246, overlap 3164246 CACGCAGCGCAGCAA GAACCTGC TCAAGC GCAGGTTC AATCATCGCCTCGAC hybC 3166381 - 3164678 - | hydrogenase 2 large subunit TERM 4225 3165352 - 3165364 + g 74 -10.5 -3.50335 | TGGTGCCTTCCCACG GCGCC TGC GGCGC TTCATCTTTATACCA TERM 4226 3165907 - 3165923 + g 70 -9.5 -3.40382 | opp_overlap 3165910, overlap 3165910 ACTGACCGCTAGCGA CAAGATC CTT GATCTTG TTCTGAACTTTCGTG TERM 4227 3166400 - 3166411 + r 76 -4.4 -5.07652 | overlap 3166389 3166394 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3167556 - 3166378 - | putative hydrogenase 2 b cytochrome subunit TERM 4228 3166524 - 3166504 - G 74 -8.3 -3.95911 | AATAGAAATCAACAA TTCTTCCCA GGT TGGGAAGTA GTGGTAGCCGCCACC TERM 4229 3167528 - 3167538 + g 77 -8.2 -4.21462 | TTACTGATGATTTTT CCGC CCA GCGG TTTTGGATCATGACT hybA 3168532 - 3167546 - | hydrogenase 2 protein HybA TERM 4230 3168122 - 3168139 + g 76 -2.7 -5.00616 | gap 1, overlap 3168126 TTTGTCATAGTGGAC GATGCCGG TTT TCGG-ATC TTTTTTCAGCGCCGA TERM 4231 3168189 - 3168202 + g 74 -6.7 -4.29106 | CAGTTAGGATCGACG CAGTG CATA CACTG TTTCTTGATGTAGGC hyb0 3169653 - 3168535 - | hydrogenase 2 small subunit STY3323 3170130 - 3169843 - | hypothetical protein TERM 4232 3170188 - 3170200 + r 89 -6.2 -5.27477 | GTTAAATGAAGGCCA GCGC ATTAC GCGC TTTTTTGCTTCACAT TERM 4233 3170371 - 3170322 - R 79 -10.7 -3.62096 | gap 1, opp_overlap 3170301 GCTCACTAGCGGAAA GCCGGAACTGCTGTACGGAGCGTT GCA AATCCTCCGT-CTGCCGTTCCAGC GCCGCCGCCGCGGCG TERM 4234 3171928 - 3171952 + r 79 -2.1 -5.48303 | overlap 3171929 GTTATCGGCAAGGCG CGGAGAATATA TAA TGCATTCTCCA TTTTTTTACAGTTAT STY3326 3172659 - 3172165 - | hypothetical protein TERM 4235 3172540 - 3172527 - G 78 -6.7 -4.62069 | CCGCCAGGGCAAAAA CGTTC GGCA GAACG TGTAGAATTTCCTGG TERM 4236 3172589 - 3172561 - G 71 -4.6 -4.57341 | overlap 3172562 AATTTCCTGGAAAAA TTTTAGCGCTAA AGCGA TCAGCGCCAAAG AGAGGCCAAAATACA TERM 4237 3173037 - 3173055 + H 70 -8.8 -3.38178 | TATTCATGGTTAACG CGCCAGTA CCA TACCGGCG TTATCGAATTCATTA TERM 4238 3173434 - 3173414 - g 80 -4.8 -4.99972 | AGAAAACAGTAAAAA TTTGTCTC AGGGA AAGACAAA ACTCAGCGATTACGA STY3328 3173337 - 3173747 + | hypothetical protein STY3329 3173764 - 3174138 + | hypothetical protein TERM 4239 3174337 - 3174322 - g 85 -6.8 -4.87291 | gap 1, overlap 3174324 TATCCTAAGCAAAAA CAGCCGG CGC CCGGC-G TCCAGGCGAAAATGA TERM 4240 3174336 - 3174324 - g 83 -10.5 -4.05402 | overlap 3174322 TCCTAAGCAAAAACA GCCGG CGC CCGGC GTCCAGGCGAAAATG STY3330 3174262 - 3175146 + | oxidoreductase TERM 4241 3175238 - 3175211 - T 100 -9.9 -5.4833 | gap 2 TTAGGCAATAAAAAA GCCGGGT--GGCG ACTT CGCCTTACCCGGC CTACAGCATCAGCAG exbD 3175684 - 3175259 - | biopolymer transport protein ExbD exbB 3176425 - 3175691 - | biopolymer transport protein ExbB STY3332a 3176567 - 3176418 - | hypothetical protein TERM 4242 3177511 - 3177494 - g 74 -7.7 -4.13304 | gap 1, opp_overlap 3177495 AAAGCAGCCTCAAAA TCGCC-GC GTG GCTGGCGA ACCATTCTCAGGTCG metC 3176677 - 3177864 + | cystathionine beta-lyase yghB 3178004 - 3178663 + | DedA family integral membrane protein STY3335 3179647 - 3178727 - | AraC family transcription regulator STY3337 3179819 - 3180982 + | alcohol dehydrogenase TERM 4243 3181646 - 3181629 - f 70 -4.9 -4.42653 | gap 1 ATGCGACGCATAAAA TCCA-GAC CGA GTCCTGGA GCCCGCTGGCGCAGG TERM 4244 3181904 - 3181921 + F 74 -8.4 -3.85817 | opp_overlap 3181882 CCCGATCCGGATCAG TCCGGC GGTTAA GCCGGA TTTATCGCACGCCAT TERM 4245 3181937 - 3181956 + F 100 -15 -5.15969 | TTTATCGCACGCCAT GCCCGACG ATGT CGTCGGGC TTTTTTGCATTCCGA TERM 4246 3182044 - 3182061 + F 74 -7.1 -4.37211 | GAATTATTCTGATTT TGTGAAT ATTT ATTCACA TTTATTATGAATTTA STY3340 3182112 - 3183566 + | membrane transporter TERM 4247 3184050 - 3184031 - g 100 -15 -4.00782 | opp_overlap 3184029 GCAGATGATGAGAAA CTGGCCGC GCTG GCGGCCAG AATTCGTGAGGCATA STY3341 3183611 - 3184066 + | hypothetical protein STY3342 3186373 - 3184202 - | hypothetical protein TERM 4248 3185225 - 3185202 - G 74 -8 -3.97947 | overlap 3185204 GTGATCGAGCAGAAA GAGCAGCCGC CAAA GCAGCCGCGC ATGATATTGATCGAA STY3343 3187928 - 3186507 - | hypothetical protein TERM 4249 3186618 - 3186628 + g 70 -3.2 -4.70169 | overlap 3186615 3186613 AATCATGACTTTCCC TCGC AGG GTGA TTTTCTTCCCTATAA STY3344 3189417 - 3187993 - | hypothetical protein TERM 4250 3188418 - 3188445 + g 73 -6.2 -4.52589 | gap 1, opp_overlap 3188418, overlap 3188420 3188423 TTTTATTCGGATAGA CCGACTGCCCCAG CAC CTGCGGC-GTCAG TTTTATCTGGGCAAG STY3345 3190416 - 3189433 - | hypothetical protein TERM 4251 3190211 - 3190195 - G 74 -2.2 -5.00616 | opp_overlap 3190196, overlap 3190196 TTGCTGGCTAAAAAA GCGTAC TATCG GTACGT TATGTTGGCGAAGAG STY3347 3191730 - 3191038 - | hypothetical protein sufI 3193382 - 3191970 - | repressor protein for FtsI plsC 3194193 - 3193456 - | 1-acyl-glycerol-3-phosphate acyltransferase TERM 4252 3194395 - 3194352 - R 90 -13.3 -3.61103 | opp_overlap 3194369 3194378, overlap 3194369 TAATCCGATCTGAAA CCGTAGGCCGGATAA-GACGC TACT GCGTCGTCATCCGGCA-ACGG CAGAGCGCCGGATGG TERM 4253 3194378 - 3194414 + r 75 -10.9 -3.10905 | opp_overlap 3194352 3194369, overlap 3194369 ATAAGACGCTACTGC GTCGTCATCCGGC AACGGCAGAGC GCCGGATGGCGGC TTAGATGCCTTGTCC parC 3196708 - 3194450 - | DNA topoisomerase IV subunit A TERM 4254 3196810 - 3196768 - R 86 -12.1 -3.48593 | overlap 3196770 3196771 3196796 TATTGCCGCAGATAA TACCCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAGGTTG CGAGGAAGTTAACGA TERM 4255 3196808 - 3196770 - R 93 -14.7 -3.31726 | overlap 3196768 3196771 3196796 TTGCCGCAGATAATA CCCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAGGT TGCGAGGAAGTTAAC TERM 4256 3196807 - 3196771 - R 100 -18.2 -2.58822 | overlap 3196770 3196768 3196796 TGCCGCAGATAATAC CCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAGG TTGCGAGGAAGTTAA STY3352 3197685 - 3196819 - | AraC family transcription regulator STY3353 3198149 - 3197757 - | hypothetical protein STY3354 3198301 - 3198960 + | DNA-binding transcriptional regulator QseB TERM 4257 3198982 - 3199002 + G 71 -6.1 -4.37527 | opp_overlap 3198972, overlap 3198985 CGCAACGTCTCAGCC TGCGCGTCA GGC TGACGCTTA TTTTCCTGATTCTGG TERM 4258 3198985 - 3198999 + G 86 -10 -4.29049 | opp_overlap 3198972, overlap 3198982 AACGTCTCAGCCTGC GCGTCA GGC TGACGC TTATTTTCCTGATTC TERM 4259 3199334 - 3199345 + G 81 -2.2 -5.37345 | gap 1, opp_overlap 3199334 TCTGAAGGATGACAA CGACC TCT GG-CG TTTTTTGTGGTTGAA TERM 4260 3199585 - 3199530 - g 82 -5.3 -5.02476 | gap 1, overlap 3199531 3199532 3199570 AGACCGTTGAAAAAA CTGGCGCAGGCGCTGCGCTTCCGGTC GCCGG AATCGGAAACGCCGCTCG-ACGCCAA AGGCGTACCGAGCGA STY3355 3198957 - 3200306 + | sensor protein QseC STY3358 3201025 - 3201339 + | hypothetical protein parE 3203356 - 3201464 - | DNA topoisomerase IV subunit B STY3360 3203965 - 3203384 - | esterase YqiA TERM 4261 3203848 - 3203819 - G 71 -10.8 -3.18239 | gap 1 GAGAGATTCCAGCAA CT-CCGCCGCATC GGCAG GATACGGCGGCAG TTGAGGGACGATCAT icc 3204792 - 3203965 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase STY3362 3205239 - 3204817 - | hypothetical protein TERM 4262 3204906 - 3204916 + g 95 -5.4 -5.30616 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTTGGATAA nudF 3205868 - 3205236 - | ADP-ribose pyrophosphatase NudF TERM 4263 3205263 - 3205315 + g 74 -7.7 -4.20712 | opp_overlap 3205280, overlap 3205271 CTCGTTTTTTAACTC TTGATGATGCAACTGAAGCCATTGC AAA GCGATGACTGCGGCTGCGTTGTCGA TTTTCCCCTCTTCTA TERM 4264 3205802 - 3205789 - G 100 -3.7 -5.95166 | opp_overlap 3205790 3205795, overlap 3205790 TCCAATGAAAAAAAA CCGCG ATAG CGCGT TTCCCGTGCAATAAT TERM 4265 3205801 - 3205790 - G 74 -7.2 -4.15473 | opp_overlap 3205790 3205795, overlap 3205789 CCAATGAAAAAAAAC CGCG ATAG CGCG TTTCCCGTGCAATAA TERM 4266 3205997 - 3206021 + H 72 -5.7 -4.42235 | opp_overlap 3205981, overlap 3205999 GCCAACTTTTTGCAG TGGCGGATTCT GCT AGAATCAGCAA TTATTTTTACAAATT tolC 3206075 - 3207544 + | outer membrane channel protein TERM 4267 3207555 - 3207612 + F 100 -21.5 -2.78384 | overlap 3207554 ATTGATAAGTTATTC GCTGGCGCTGCGTTTATCAGACCTATG CCCT TGTAGGTCTGGTAAGCGCGGCGCTACC TGTCATAAAGCCGCG TERM 4268 3207892 - 3207875 - g 76 -2.7 -5.00616 | opp_overlap 3207875, overlap 3207876 CTGGCTGTGAAAAAA GCGAT GAAACCGT ATCGC TGTATCAAAACGCTG TERM 4269 3207921 - 3207903 - g 71 -6 -4.25283 | ATCGCTGTATCAAAA CGCTGA TGACTGT TCAGCG GCGAATCCGGGCAAA STY3365 3207757 - 3208428 + | hypothetical protein TERM 4270 3208801 - 3208817 + G 77 -3.6 -5.10497 | overlap 3208800 CCGACACGCCAACAT CGCTGT ATGAA GCGGCG TTTTTTCAGTGGATT STY3366 3208434 - 3209597 + | hypothetical protein STY3367 3210489 - 3209659 - | hypothetical protein TERM 4271 3210892 - 3210877 - g 80 -4.6 -5.00884 | overlap 3210881 ATCTGGTGCAAAAAA GGCAGC AGCC GCTTCC CGGCTCGATAAAACG STY3368 3210588 - 3211361 + | zinc transporter ZupT TERM 4272 3212358 - 3212348 - g 80 -4.6 -5.11389 | overlap 3212355 AGAATATAAAGAAAA CGGC AAA GCCA TGAAGGATGACTATG TERM 4273 3212574 - 3212552 - g 84 -3.3 -5.36364 | opp_overlap 3212568 3212572, overlap 3212553 CGAAAAAGATAAAAA TGCGGGCAT TCTTG ATGCCGGCC CGGCGGGCGGGGCTT assT 3212004 - 3213800 + | putative arylsulfate sulfotransferase TERM 4274 3214196 - 3214186 - g 91 -6.8 -5.1925 | opp_overlap 3214185 TCACAATTCAAAAAA GCGA AGT TCGC CTGGTATACGGCTTA dsbA 3213820 - 3214491 + | disulfide isomerase dsbB 3214506 - 3215183 + | putative disulfide oxidoreductase TERM 4275 3215233 - 3215198 - T 83 -9 -4.21142 | opp_overlap 3215203, overlap 3215203 ACCTGAATAGATAAA CCAAAGCAGAGGTCTG CATT CAGGCCTCTGCTTTTC TCACAATAATTTTAC TERM 4276 3215228 - 3215203 - T 95 -13.3 -4.20552 | opp_overlap 3215203, overlap 3215198 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4277 3215203 - 3215228 + T 100 -15.5 -4.3898 | opp_overlap 3215198 3215203 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4278 3215310 - 3215329 + T 100 -12.2 -5.02074 | opp_overlap 3215310 AAGGAATACAAAAAA GCCGATGA GATG TCATCGGC TTTTTTCAACCATGA TERM 4279 3215329 - 3215310 - T 100 -12.2 -5.50925 | opp_overlap 3215310 AAGGAATACAAAAAA GCCGATGA GATG TCATCGGC TTTTTTCAACCATGA ribB 3216007 - 3215354 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4280 3215722 - 3215750 + g 77 -8.1 -4.10429 | opp_overlap 3215727, overlap 3215725 3215727 3215743 CTTCAATGGTCACGG TAAAACCGGTGCC GTA GGCGCTGGTGTTG TTTTCCACCATCATT TERM 4281 3215725 - 3215747 + g 74 -7.6 -4.17762 | opp_overlap 3215727, overlap 3215722 3215727 3215743 CAATGGTCACGGTAA AACCGGTGCC GTA GGCGCTGGTG TTGTTTTCCACCATC TERM 4282 3215727 - 3215745 + g 76 -10.2 -3.68435 | opp_overlap 3215727, overlap 3215725 3215722 3215743 ATGGTCACGGTAAAA CCGGTGCC GTA GGCGCTGG TGTTGTTTTCCACCA TERM 4283 3216662 - 3216639 - g 71 -4.4 -4.58395 | overlap 3216640 3216641 CGCACCCGGGAAAAA CTGGCGCTGC TGGA GCAACGCCTC AGCGAACTGGAAGCT STY3375 3216384 - 3216740 + | hypothetical protein TERM 4284 3216771 - 3216744 - T 100 -9.8 -4.90906 | opp_overlap 3216749, overlap 3216745 3216746 CCACAAGAGTAAAAA CGTGAACGGGCC TGAC GGCCCGCTCATA TAAGATCTGAATAAT TERM 4285 3216770 - 3216745 - T 82 -11.1 -3.53459 | opp_overlap 3216749, overlap 3216744 3216746 CACAAGAGTAAAAAC GTGAACGGGCC TGAC GGCCCGCTCAT ATAAGATCTGAATAA TERM 4286 3216769 - 3216746 - T 86 -14.6 -2.70991 | opp_overlap 3216749, overlap 3216745 3216744 ACAAGAGTAAAAACG TGAACGGGCC TGAC GGCCCGCTCA TATAAGATCTGAATA glgS 3217018 - 3216815 - | glycogen synthesis protein GlgS TERM 4287 3217736 - 3217700 - g 75 -13 -2.60512 | gap 1, overlap 3217697 GGGAAGAGGAATTTA TCGGCGGCATGGC-GAT TATT ACCGGCCACGCCGCCGT CGCCGGAACACCTTG STY3377 3217282 - 3217902 + | hypothetical protein TERM 4288 3217961 - 3217975 + G 77 -11.4 -3.53531 | CATCATGGATGTTTA CCGCCA TCG TGGCGG TTATCGTCTTACTAA STY3378 3217921 - 3219600 + | hypothetical protein TERM 4289 3219621 - 3219642 + T 100 -13.7 -5.9667 | opp_overlap 3219602 CCGCCATATCTCCTG TCCCTGGCC ATAA GGCCGGGGA TTTTTTTATCTTTTT TERM 4290 3219803 - 3219822 + T 79 -10 -3.72576 | gap 1, opp_overlap 3219786 3219796 3219803 GGCTGAAACGGGAAA GCCCC-TCC CGA GGAAGGGGC TTTAATAAGGAAAGG TERM 4291 3219822 - 3219803 - T 86 -11.4 -3.71649 | opp_overlap 3219803, overlap 3219786 3219796 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC TTTAATAAGGAAAGG TERM 4292 3219914 - 3219936 + T 77 -9.1 -3.94051 | opp_overlap 3219913 3219911 3219908 AACAGCCAATCAGAG GGGGGAGAG ATCCC CTCTCACCC TTATTCCTTTACTTT TERM 4293 3219979 - 3219966 - T 83 -2.3 -5.76949 | TAGGTCGAAAAAAAA GCAGC GTCA ACCGC GAGATACGCGTCGAA rfaE 3221493 - 3220060 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 4294 3221294 - 3221273 - G 72 -11.5 -3.13403 | opp_overlap 3221271, overlap 3221271 3221291 GCGGCGTCATCAATA CCCGTCAGG CCGA CCAGACGGG CGTTCGCTCCCAGAG glnE 3224384 - 3221541 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 4295 3223932 - 3223916 - G 70 -6.5 -4.11216 | overlap 3223919 TGCCCATGCCTAAAA TCAGCAG CGG CTGCGGA ACGCCCTGCGGGTTA TERM 4296 3223969 - 3223919 - G 76 -11.7 -3.09004 | overlap 3223916 CCATGCCTAAAATCA GCAGCGGCTGCGGAACGCCCTGC GGGTT ACAGGGGGTTCCCCATTCGCGGC AACAGGCGGCATACA TERM 4297 3224135 - 3224111 - G 76 -5 -4.77036 | gap 1, opp_overlap 3224133 TGCGACGACGAAAAA GCCTCAGCTCA CGCA TCAGC-GAGGC GTCGTCACAGACACC STY3381 3225803 - 3224502 - | hypothetical protein STY3382 3226045 - 3226659 + | putative signal transduction protein TERM 4298 3226908 - 3226893 - g 70 -9 -3.76176 | CAAACTCACGAAGAA TACGCG CTGG CGCGTA CCGAGCGTAAATCCG TERM 4299 3227130 - 3227140 + G 77 -8.2 -4.08692 | overlap 3227129 3227131 CCCTTGCGCGTATTG CGCG TGG CGCG TTTTGCCGCCCGTTA TERM 4300 3227549 - 3227516 - g 73 -5.1 -4.62471 | gap 1, overlap 3227517 3227518 CTTAACGCCGAAAAA CCTCTGGCCGC-GCCA TCA TGGCCACGGCCCGGTG GGCGTGAAACTGGTC cca 3226722 - 3227963 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 4301 3227996 - 3227965 - T 86 -11.6 -3.64822 | opp_overlap 3227959 ACCCCGCCAGCTAAA CGCCATCCGGCA CGATAAAT TGCCTGATGGCG CTGCGCTTATCAGAC TERM 4302 3228049 - 3228036 - T 73 -9.5 -3.30124 | TGTTAGGCCGGACAA GGCGG TACG CCGCC ATCCGGCACGGTCAA uppP 3228889 - 3228068 - | undecaprenyl pyrophosphate phosphatase folB 3229349 - 3228987 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase STY3386 3229453 - 3230064 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 4303 3230280 - 3230302 + T 100 -11.2 -4.7416 | overlap 3230281 TTGCTGTAAATCCGT TGGGGCGGCA TGA TGTCGCCCCC TTTTTCCGCTTTTAC TERM 4304 3230281 - 3230301 + T 93 -14.7 -3.43411 | overlap 3230280 TGCTGTAAATCCGTT GGGGCGGCA TGA TGTCGCCCC CTTTTTCCGCTTTTA STY3387 3231327 - 3230314 - | O-sialoglycoprotein endopeptidase TERM 4305 3231119 - 3231132 + g 71 -5.9 -4.25256 | overlap 3231113 GCGTCGATATCGCTC GCCGT CAGA GCGGC TTCTTTTAATGCCGC TERM 4306 3231522 - 3231505 - H 74 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3231555 - 3231770 + | 30S ribosomal protein S21 TERM 4307 3231817 - 3231849 + F 80 -7 -4.62475 | gap 1, overlap 3231820 TCGAGTTGTAGTTGT AAGGCCGTGC-TTCC GAAA GGAATGCGCGGCTTG TTTTCGTTTATGCAT TERM 4308 3231820 - 3231846 + F 95 -10.9 -4.40882 | gap 1, overlap 3231817 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTGTTTTCGTTTATG TERM 4309 3232148 - 3232176 + G 70 -5.4 -4.45517 | gap 1, opp_overlap 3232147 3232146 3232164 3232174, overlap 3232164 3232166 ATAATGAGAAAACCC CT-TCTTTCACCG TAAA CGGTGAAAAACAG TTTTATCACTGCTTT TERM 4310 3232452 - 3232469 + G 71 -9.9 -3.61536 | opp_overlap 3232440 AAAGCGCGGTCTGAG CGCTGAA ATTA TTCAGCG TTTCGCCATTGGCTT TERM 4311 3233331 - 3233305 - g 86 -10.8 -4.11216 | CGTTTAGTGCCAAAA CAGGCGGAAAGC GGC GTTTCCCGCCCG GCTCCGCAGCTAAAA dnaG 3232006 - 3233751 + | DNA primase TERM 4312 3233868 - 3233846 - g 74 -10.6 -3.53012 | TGCCCTCGCTTTAAA TGTCGACAGC TAT ACCGTCGACA CCAATCAAACGAATA TERM 4313 3234524 - 3234504 - g 80 -10.3 -3.83155 | overlap 3234506 GACGAAGATGAAGAA GACGGCGAC GAT GACGCCGCC GATGACGACAACAGC TERM 4314 3234525 - 3234506 - g 85 -12.8 -3.49169 | overlap 3234504 CGAAGATGAAGAAGA CGGCGACG ATGA CGCCGCCG ATGACGACAACAGCA rpoD 3233766 - 3235748 + | RNA polymerase sigma factor RpoD TERM 4315 3235768 - 3235785 + T 100 -14.1 -5.626 | opp_overlap 3235768 CCGTACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTTATCAGGTC TERM 4316 3235785 - 3235768 - T 100 -14.1 -3.95073 | opp_overlap 3235768 CCGTACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTTATCAGGTC mug 3236378 - 3235872 - | G/U mismatch-specific DNA glycosylase TERM 4317 3236625 - 3236608 - R 82 -11.3 -3.5275 | opp_overlap 3236608, overlap 3236604 AAATCATATAATTAA GCCACTC TAAA GAGTGGC TTTTTTGTTTCTGAC TERM 4318 3236608 - 3236625 + r 100 -11.3 -5.72622 | opp_overlap 3236604 3236608 AAATCATATAATTAA GCCACTC TAAA GAGTGGC TTTTTTGTTTCTGAC STY3392 3237426 - 3236659 - | hypothetical protein TERM 4319 3237614 - 3237590 - H 73 -4.3 -4.83269 | opp_overlap 3237590, overlap 3237583 AGATTATAGCAAAAA TGGCTTTTACC CTT GCTAAAACCCA TCATTTAGATATAAA TERM 4320 3238069 - 3238055 - g 100 -7.8 -5.40072 | GCGGGCGGAAAAAAA TCGCGA TTA CCGCGA ACGGCGCGCAATGGC STY3393 3237661 - 3238305 + | hypothetical protein cheM 3239870 - 3238302 - | methyl-accepting chemotaxis protein II TERM 4321 3240231 - 3240191 - R 100 -17.1 -2.78384 | gap 2, opp_overlap 3240187 3240194 3240196, overlap 3240194 3240196 CCGCCTTCTATCAGA GCACATCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGATGT-C ATTACCGTTGCTACC TERM 4322 3240194 - 3240229 + r 100 -19.9 -2.75957 | gap 1, opp_overlap 3240191 3240194 3240196, overlap 3240187 3240196 CCTTCTATCAGAGCA CATCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGATG TCATTACCGTTGCTA TERM 4323 3240229 - 3240194 - R 100 -19.9 -2.66316 | gap 1, opp_overlap 3240194 3240187 3240196, overlap 3240191 3240196 CCTTCTATCAGAGCA CATCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGATG TCATTACCGTTGCTA TERM 4324 3240196 - 3240227 + r 100 -16.7 -2.92246 | gap 1, opp_overlap 3240196 3240194 3240191, overlap 3240194 3240187 TTCTATCAGAGCACA TCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGA TGTCATTACCGTTGC TERM 4325 3240227 - 3240196 - R 100 -16.7 -2.87468 | gap 1, opp_overlap 3240194 3240187 3240196, overlap 3240194 3240191 TTCTATCAGAGCACA TCCGCCCGGTAAGC TTGTT GCT-ACCGGGCGGA TGTCATTACCGTTGC air 3241778 - 3240258 - | aerotaxis receptor protein TERM 4326 3243049 - 3243031 - g 70 -6.6 -4.08144 | TGGATGAAGTACAAA CCGGCATG GGG CGTACCGG CAAGATGTTTGCCTG TERM 4327 3243285 - 3243269 - g 75 -5.7 -4.63218 | overlap 3243271 CCTGCTGGAACAAAA CCTCCCG GCC CAGGCGG AACAAAAAGGCGATA TERM 4328 3243304 - 3243294 - g 74 -2.4 -5.07486 | CAGGCGGAACAAAAA GGCG ATA CGCT CCTGGATGGTTTTCG STY3396 3242181 - 3243587 + | putrescine--2-oxoglutarate aminotransferase TERM 4329 3243842 - 3243814 - T 71 -7.6 -3.88291 | gap 2 TACTACTCTCAGAAA CCGTGTGC-T-GAT GGG ATCGATGCACACGG GTCTGGAAGAACATC TERM 4330 3245814 - 3245846 + T 70 -9.9 -3.10905 | overlap 3245806 3245817 CTTATCGGGCCTATG CCGTCATACCGGTTT TAT AGGCCGGTATGATGC TTGAGTGCCTTATCG TERM 4331 3245817 - 3245843 + T 79 -12.4 -2.76189 | overlap 3245814 3245806 ATCGGGCCTATGCCG TCATACCGGTTT TAT AGGCCGGTATGA TGCTTGAGTGCCTTA ygjO 3246992 - 3245856 - | hypothetical protein STY3401 3247078 - 3247575 + | hypothetical protein TERM 4332 3248077 - 3248093 + G 90 -4.4 -5.39755 | gap 1, overlap 3248080 GCTGATAGCGAAAGG TGTGCCG GAAG CGGC-CA TTTTTTGTGATTATG ygjQ 3247727 - 3248419 + | hypothetical protein TERM 4333 3248449 - 3248422 - f 74 -6.9 -4.25104 | TTCTCGCCAGTAAAA TGCCAGAGTGC GTCGCA GCGCACTGGCA AGGGCGGAAAGGCGT TERM 4334 3249392 - 3249382 - g 70 -6.8 -4.1899 | opp_overlap 3249387 CCAGCTTATTGAAAA CCAC GCC GTGG AACATCCGGGGTTGT STY3403 3248471 - 3249505 + | oxidoreductase TERM 4335 3249647 - 3249674 + F 93 -12.2 -3.8211 | opp_overlap 3249651, overlap 3249651 GTCACCGGGCAGCCA TAAAGGAATGCG TCAG CGTATTCCTTTA TTGTTGTAAGTGAGA TERM 4336 3249651 - 3249670 + F 81 -8.6 -4.52415 | opp_overlap 3249651, overlap 3249647 CCGGGCAGCCATAAA GGAATGCG TCAG CGTATTCC TTTATTGTTGTAAGT TERM 4337 3249709 - 3249688 - f 86 -14.5 -2.52676 | opp_overlap 3249690 TATTGTTGTAAGTGA GACCTTGCC GAAT GGCAAGGTC TATGCATAAAAGCAG TERM 4338 3249690 - 3249707 + F 74 -11.3 -2.91264 | opp_overlap 3249688 TTGTTGTAAGTGAGA CCTTGCC GAAT GGCAAGG TCTATGCATAAAAGC TERM 4339 3249754 - 3249721 - f 81 -8.1 -4.42386 | opp_overlap 3249725, overlap 3249722 3249724 3249725 GGTCTATGCATAAAA GCAGCGGCTAATGCC ATTC GGCATTAGCCGTTTT TTTGCATGGGGAGAA TERM 4340 3249753 - 3249722 - f 79 -11.6 -3.2511 | opp_overlap 3249725, overlap 3249721 3249724 3249725 GTCTATGCATAAAAG CAGCGGCTAATGCC ATTC GGCATTAGCCGTTT TTTTGCATGGGGAGA TERM 4341 3249751 - 3249724 - f 86 -14.2 -3.18788 | opp_overlap 3249725, overlap 3249722 3249721 3249725 CTATGCATAAAAGCA GCGGCTAATGCC ATTC GGCATTAGCCGT TTTTTTGCATGGGGA TERM 4342 3249750 - 3249725 - f 100 -17.7 -2.50791 | opp_overlap 3249725, overlap 3249724 3249722 3249721 TATGCATAAAAGCAG CGGCTAATGCC ATTC GGCATTAGCCG TTTTTTTGCATGGGG TERM 4343 3249725 - 3249750 + F 100 -17.7 -5.47218 | opp_overlap 3249725 3249724 3249722 3249721 TATGCATAAAAGCAG CGGCTAATGCC ATTC GGCATTAGCCG TTTTTTTGCATGGGG STY3404 3249773 - 3250741 + | drug efflux protein TERM 4344 3250801 - 3250775 - f 100 -16.6 -4.72272 | opp_overlap 3250775 CTGCCCCATCAAAAA CGCCCGGCAG CGTACAC CTGCCGGGCG TTTTTGTTTAACATG TERM 4345 3250775 - 3250801 + F 100 -16.6 -5.28942 | opp_overlap 3250775 CTGCCCCATCAAAAA CGCCCGGCAG CGTACAC CTGCCGGGCG TTTTTGTTTAACATG STY3405 3250996 - 3252240 + | serine/threonine transporter SstT TERM 4346 3252277 - 3252252 - f 90 -14.7 -3.2327 | overlap 3252253 CTAAGTGATTATCAA TGCCGGATGGC GCGT GCCATCCGGCG TGACGATAAATCAGA TERM 4347 3252276 - 3252253 - f 100 -18.2 -2.53641 | overlap 3252252 TAAGTGATTATCAAT GCCGGATGGC GCGT GCCATCCGGC GTGACGATAAATCAG TERM 4348 3252811 - 3252827 + G 73 -5 -4.65895 | TGTTTCTGGAAAATG GGCTGC TCCCT GCCGCC TTTTTGCCTGGCGAC TERM 4349 3253052 - 3253078 + G 85 -8.7 -4.45577 | opp_overlap 3253052 3253050 CCTTTTCCATAAACA CGGCCTGTCGG CATTA TTGATAGGCCG TTTTATCGCGTTTGT STY3406 3252690 - 3253352 + | hypothetical protein STY3407 3253356 - 3253739 + | hypothetical protein TERM 4350 3253825 - 3253807 - f 76 -7.4 -4.27441 | opp_overlap 3253806 3253803 3253807 ACTATGATTAATAAA GCGGTG CTTAACC CACCGC GTTATTATCGGGATC STY3408 3253884 - 3254252 + | hypothetical protein STY3409 3254294 - 3254599 + | hypothetical protein STY3410 3254602 - 3255000 + | hypothetical protein TERM 4351 3255086 - 3255030 - g 71 -7.2 -3.99805 | opp_overlap 3255049, overlap 3255025 3255060 CGCGAAAAACGTAAA GCG-CTGCTTCTCAGTCAGATCCAGCAG CAA CGGCTGGATCTGTCCGCC-AGCCGTCGC GACTGGCTGGAGACC STY3411 3254997 - 3255296 + | hypothetical protein TERM 4352 3255313 - 3255360 + F 100 -13.7 -4.45485 | gap 2, opp_overlap 3255316, overlap 3255316 ATCTTTTCTTTTATA GCATCGCGCCATCAGGT-T-ATC ACCC GATTACACCTGGTGGCGCGATAC TTTTATGCATATCGT TERM 4353 3255357 - 3255316 - f 76 -11.8 -2.62184 | gap 2, opp_overlap 3255316 3255313 TTTTCTTTTATAGCA TCGCGCCATCAGGT-T-ATC ACCC GATTACACCTGGTGGCGCGA TACTTTTATGCATAT TERM 4354 3255316 - 3255357 + F 86 -14 -3.1919 | gap 2, opp_overlap 3255316, overlap 3255313 TTTTCTTTTATAGCA TCGCGCCATCAGGT-T-ATC ACCC GATTACACCTGGTGGCGCGA TACTTTTATGCATAT TERM 4355 3255496 - 3255471 - g 75 -11.2 -3.35679 | opp_overlap 3255474, overlap 3255474 TCTCTCCAGCGATAA CAATGACGCG CTAAAC CGCGCCATTG CTCATGAAAATAGCA STY3412 3255451 - 3255936 + | hypothetical protein TERM 4356 3255960 - 3255979 + F 80 -6.4 -4.84311 | opp_overlap 3255960 3255969, overlap 3255955 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTTATCTGAAG TERM 4357 3255979 - 3255960 - f 89 -6.4 -5.28481 | opp_overlap 3255960 3255955, overlap 3255969 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTTATCTGAAG STY3413 3256004 - 3256990 + | hypothetical protein TERM 4358 3256996 - 3257013 + F 93 -12.7 -3.73647 | CTTTGGCTAATTTCA GGCGTCC TCCG GGACGCC TTATTAATAAATGCC TERM 4359 3257447 - 3257469 + G 74 -4.8 -4.72272 | opp_overlap 3257447 3257446 ACACCGGGCGACAAC CGCTTCGG CCCCGAT CCGAAACG TTTTTCCTGAGGGCG STY3414 3257114 - 3257479 + | hypothetical protein TERM 4360 3257482 - 3257496 + T 95 -12.8 -4.07568 | overlap 3257483 3257485 ACGTTTTTCCTGAGG GCGGCG CGG CGCCGC TTTTAAAGCGCCGCG TERM 4361 3257483 - 3257516 + T 93 -9.5 -4.64861 | gap 1, opp_overlap 3257504, overlap 3257482 3257485 CGTTTTTCCTGAGGG CGGCGCGGCGCCGCTT TTA AAGCGCCGC-GCGCTA TTTATTTTCCGGCGA TERM 4362 3257485 - 3257514 + T 100 -14.3 -3.93868 | gap 1, opp_overlap 3257504, overlap 3257482 3257483 TTTTTCCTGAGGGCG GCGCGGCGCCGCTT TTA AAGCGCCGC-GCGC TATTTATTTTCCGGC STY3415 3258414 - 3257518 - | LysR family transcriptional regulator TERM 4363 3257698 - 3257680 - G 72 -11 -3.10796 | TTCCACCATCGAATA TGGCATCG TCG CGACGCCA AGCCCGGCCAGCAGC TERM 4364 3258662 - 3258674 + G 76 -10.5 -3.65542 | opp_overlap 3258650, overlap 3258660 GAACCAGGAAGTGCT GGCGC CGG GCGCC TCTTTTCAGCCTCGA STY3416 3258519 - 3259220 + | hypothetical protein STY3417 3259244 - 3259408 + | hypothetical protein TERM 4365 3259448 - 3259411 - T 82 -11.4 -3.57144 | gap 2 GGCCGCAGCCTGAAA TCATGCCGGATGGCGGCG CAAG CGCC-CGATCCGGC-TGA TAACGGGTAGACCCG TERM 4366 3259492 - 3259514 + T 77 -9 -3.99374 | overlap 3259493 3259510 CATCGGGCAACACGC TGCCCCGACG TCA TGCCGGGGCG TTATTATTAATGCGC TERM 4367 3259493 - 3259513 + T 73 -10.3 -2.99142 | overlap 3259492 3259510 ATCGGGCAACACGCT GCCCCGACG TCA TGCCGGGGC GTTATTATTAATGCG STY3418 3260831 - 3259521 - | hypothetical protein TERM 4368 3261199 - 3261186 - R 70 -5.2 -4.46233 | overlap 3261197 GGAATCCTAAATAAA CGCC AAAGAA GGCG GTCATGACGGCAAAG TERM 4369 3262045 - 3262028 - R 75 -2.7 -5.17744 | AGACAGGAAGAAAAA CGATC CCTGCGCC GATCG CCATCCCGATACTCA TERM 4370 3262441 - 3262422 - R 100 -15 -5.58179 | opp_overlap 3262422 TATCACAACAAAAAA GGGCGCAC TTTG GTGCGCCC TTTTCTCAGCTTCTG TERM 4371 3262422 - 3262441 + r 100 -15 -4.43859 | opp_overlap 3262422 TATCACAACAAAAAA GGGCGCAC TTTG GTGCGCCC TTTTCTCAGCTTCTG tdcG 3263866 - 3262502 - | L-serine dehydratase TERM 4372 3263900 - 3263935 + r 78 -11.9 -3.06915 | gap 1, opp_overlap 3263898 CGTTCAGTGAAGATC CGT-CGCGGGGCGATC CACAC GATCGCCCCGTTCACG TTACATCGCCTGAGT tdcE 3266230 - 3263936 - | formate acetyltransferase TERM 4373 3264553 - 3264563 + g 74 -6.8 -4.2558 | CAATAGCAAAGTCGA TGGC AAG GCCA TTTTCGTCGCGAATC tdcD 3267472 - 3266264 - | propionate/acetate kinase TERM 4374 3267089 - 3267079 - G 77 -8.2 -4.08216 | GCACGGCCGGGAAAA GGCG CCG CGCC GCGTCAATGCCGCTT tdcB 3269879 - 3268890 - | threonine dehydratase TERM 4375 3269530 - 3269540 + g 74 -6.8 -4.35524 | opp_overlap 3269524, overlap 3269524 GCCGAATAATCACAG GTGG CCG CCAC TTTTGACTTTGGCGC tdcA 3270915 - 3269977 - | DNA-binding transcriptional activator TdcA TERM 4376 3271616 - 3271603 - R 80 -5.9 -4.93365 | opp_overlap 3271603 3271604, overlap 3271604 CCTGATAAGCAAAAA CCCGC CGAA GCGGA TTTTATGAAGAGGTG TERM 4377 3271732 - 3271711 - R 100 -10.1 -5.0925 | opp_overlap 3271710 3271711 CTGTAAAAGCAAAAA CCCGCCAGC TTAC ACTGACGGG GTTTATGAAGAGGTG TERM 4378 3271847 - 3271821 - R 73 -10.3 -3.04398 | gap 1, opp_overlap 3271827, overlap 3271827 GTCGCCCTGTAAAAG CA-AAAACCCGC CGAA GCGGGTTTTATG AAGAAGTGAAACTGA TERM 4379 3271840 - 3271827 - R 100 -9.5 -5.0925 | opp_overlap 3271827, overlap 3271821 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAAGTG TERM 4380 3271827 - 3271840 + r 87 -9.5 -4.3739 | opp_overlap 3271821 3271827 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAAGTG TERM 4381 3271955 - 3271929 - R 73 -10.3 -3.04398 | gap 1, opp_overlap 3271935, overlap 3271935 GCCGCCCTGTAAAAG CA-AAAACCCGC CGAA GCGGGTTTTATG AAGAAGTGAAACTGA TERM 4382 3271948 - 3271935 - R 100 -9.5 -5.0925 | opp_overlap 3271935, overlap 3271929 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAAGTG TERM 4383 3271935 - 3271948 + r 87 -9.5 -4.3739 | opp_overlap 3271935 3271929 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAAGTG STY3429 3273512 - 3272367 - | glycerate kinase I TERM 4384 3272763 - 3272787 + g 70 -9.1 -3.65827 | overlap 3272764 CGCCCCCATACCGCC TGCCGCGCCTG CGC CGGGCGCCGCC TTTACGTCGACATTC TERM 4385 3272764 - 3272786 + g 76 -12.6 -2.79175 | overlap 3272763 GCCCCCATACCGCCT GCCGCGCCTG CGC CGGGCGCCGC CTTTACGTCGACATT TERM 4386 3273163 - 3273125 - G 84 -12.5 -3.33261 | CGCCAATGCCTATAA TGATATTGCTTGCGCCG CTTTC CAGCGCCTGCAATATCA GCTCCCCCGTTCCCC TERM 4387 3273601 - 3273573 - R 71 -10.2 -2.64803 | overlap 3273570 3273569 CCAGCCTGAAATTCA GGCCCGGATCGC TACAC GCCATCCGGGCA CAACGTCGTTAGCGA garR 3274500 - 3273610 - | tartronate semialdehyde reductase TERM 4388 3273973 - 3273984 + g 73 -5.8 -4.42788 | CAACGCCACGATCAC CTGG TTAG CCAG TTTTGTGACGTTGCC TERM 4389 3274170 - 3274184 + g 71 -10 -3.57561 | CAACGCCCTTCGCCT TCAGCG CAT CGCTGA TTTCACGGCTTGCCA garL 3275296 - 3274526 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase TERM 4390 3274657 - 3274674 + g 76 -12.7 -2.71712 | opp_overlap 3274655 3274654, overlap 3274642 3274656 CCGGCGCCAGAATGC CGCACGG TTTA CCGTGCG CTTTAGCGCGGGCGA TERM 4391 3274811 - 3274780 - G 95 -8 -4.83615 | TAGGGCCGACAAAAA TGCCATCAACGC CTTCCGTT GCGGCGATGGCA TCAACATTGTCGACA TERM 4392 3275855 - 3275865 + G 87 -8.2 -4.53303 | opp_overlap 3275854 AAATTCGCCAGGAAT CGCC ATC GGCG TTTTATATAAAAGTA TERM 4393 3276498 - 3276478 - g 89 -8.9 -4.56597 | overlap 3276480 CTCGGTTGCGAAAAA CTGCAGCCG GAA CGACTGCTG GAAGGCACCGAGGAT TERM 4394 3276673 - 3276653 - g 74 -10.3 -3.57263 | AGCGCCAGCGCGAAA CCTGCCCGG CCT CCGAGCTGG TCGTCGGGATGCAAT garD 3275827 - 3277398 + | D-galactarate dehydratase TERM 4395 3277425 - 3277442 + T 79 -7.7 -4.46493 | opp_overlap 3277425, overlap 3277420 AAGCGCCTCGCAAAA CATGGCT TAAG GGCCATG TTTTCATATGTTTGA TERM 4396 3277442 - 3277425 - T 71 -7 -4.08064 | opp_overlap 3277425 3277420 AAGCGCCTCGCAAAA CATGGC TTAAGG GCCATG TTTTCATATGTTTGA STY3433 3278585 - 3277638 - | carbohydrate kinase gatY 3279763 - 3280617 + | tagatose-bisphosphate aldolase TERM 4397 3280870 - 3280854 - g 73 -5.1 -4.62069 | opp_overlap 3280866, overlap 3280868 TGCGTACCCGAAAAA TGCCAGT CAC ACCAGCA TGGGTAGAAGAACCC STY3436 3280628 - 3281542 + | carbohydrate kinase STY3437 3281569 - 3282996 + | PTS system, sugar phosphotransferase enzyme IIBC component STY3438 3282983 - 3283789 + | PTS-transport family phosphoryl transfer protein TERM 4398 3283805 - 3283828 + F 100 -16 -4.72272 | CCTTCATTTGTTCCT CCGTGCCCGC TCCG GCGGGTACGG TTTTTCATGACAAAG TERM 4399 3283977 - 3283966 - f 76 -2.2 -5.29445 | TTCGAAGAATAAAAA CGAA AGAA CTCG GAGATAAAAGTGAAA TERM 4400 3284410 - 3284428 + F 84 -10.2 -3.85698 | GATCCGATGGTCGTT GCACGCCG TGC CGCCGTGC TTTGTAAAGCAGCAG gatA 3285273 - 3285737 + | galactitol-specific PTS system component IIA gatB 3285768 - 3286052 + | galactitol-specific PTS system component IIB gatC 3286056 - 3287429 + | PTS system, galactitol-specific IIC component gatD 3287473 - 3288516 + | galactitol-1-phosphate dehydrogenase gatR 3288627 - 3289400 + | galactitol utilization operon repressor STY3446 3290421 - 3289558 - | hypothetical protein TERM 4401 3290480 - 3290469 - H 79 -3 -5.41143 | overlap 3290472 CATTGCGTAAAAAAA TATC ACTG GATA CAGTATGGTACCCTC TERM 4402 3291561 - 3291521 - gH 80 -9.6 -3.86346 | gap 1, opp_overlap 3291556, overlap 3291522 TCAGCGCGCCACAAA CTCCCCCTGCGCAGCCTGC TACA GCAAGC-GCGCCGGCGGAT CCCTCCGCTGAATTA TERM 4403 3291560 - 3291522 - gH 82 -13.1 -2.91593 | gap 1, opp_overlap 3291556, overlap 3291521 CAGCGCGCCACAAAC TCCCCCTGCGCAGCCTGC TACA GCAAGC-GCGCCGGCGGA TCCCTCCGCTGAATT TERM 4404 3291959 - 3291937 - gH 80 -6.2 -4.8048 | overlap 3291938 GTGTTACAGCAAAAA TTCGGCTCCG TAG CCGAGCTGAA AATGGGCGTGAACGG TERM 4405 3291953 - 3291938 - gH 72 -9 -3.47806 | overlap 3291937 TGTTACAGCAAAAAT TCGGCT CCGT AGCCGA GCTGAAAATGGGCGT STY3447 3290485 - 3292536 + | hypothetical protein yraN 3292494 - 3292889 + | hypothetical protein STY3449 3292911 - 3293501 + | DnaA initiator-associating protein DiaA STY3450 3293511 - 3294086 + | hypothetical protein STY3451 3294788 - 3294153 - | hypothetical protein TERM 4406 3295077 - 3295060 - g 89 -3.3 -5.72207 | GTGAAAGGAAAAAAA GGCGAGG CCAG CGTCACC ATTGATAAGGCTATT STY3452 3294919 - 3295437 + | hypothetical protein STY3453 3295860 - 3295417 - | hypothetical protein STY3454 3295898 - 3296215 + | GIY-YIG nuclease superfamily protein STY3455 3296705 - 3296202 - | putative acetyltransferase TERM 4407 3296390 - 3296349 - G 80 -12.3 -3.37537 | gap 1, opp_overlap 3296343, overlap 3296344 3296361 CAGTTCAAAACCGAA GCGGCTAT-ATAACGCCGGG TCG CCCAGCGTCACGACCGCCGC GTAGCCGAACTCGTT TERM 4408 3296377 - 3296361 - G 77 -11.5 -3.494 | overlap 3296349 3296344 GAAGCGGCTATATAA CGCCGGG TCG CCCAGCG TCACGACCGCCGCGT STY3456 3297223 - 3296699 - | hypothetical protein TERM 4409 3297509 - 3297496 - g 83 -9.5 -4.18018 | opp_overlap 3297496 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4410 3297496 - 3297509 + G 80 -9.5 -4.06491 | opp_overlap 3297496 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4411 3297618 - 3297578 - g 95 -3.4 -5.81412 | gap 2 TTTACCGAAAAAAAA TTGCAG-GAAGC-GGTGA GTTTTGT TCACCAGCATCGCCGCAA ATTACACATCGCCAT STY3457 3297440 - 3298435 + | putative protease TERM 4412 3299250 - 3299238 - g 93 -10.5 -4.4078 | overlap 3299239 TCGCGCTAACGAAAA CGGCG GCG CGCCG TTACCGCTTGCCGCC yhbV 3298444 - 3299322 + | hypothetical protein TERM 4413 3299373 - 3299400 + F 75 -6.2 -4.44355 | gap 1, opp_overlap 3299343 3299362, overlap 3299370 3299374 3299397 AATAGCGCTCCCGAA GGCCCGATAAGCG CAG CGCC-ATCGGGCA TTGTTTTTGCCATTA TERM 4414 3299374 - 3299399 + F 71 -9.7 -3.25528 | gap 1, opp_overlap 3299343 3299362, overlap 3299373 3299370 3299397 ATAGCGCTCCCGAAG GCCCGATAAGCG CAG CGCC-ATCGGGC ATTGTTTTTGCCATT STY3459 3299500 - 3300507 + | hypothetical protein STY3460 3301842 - 3300598 - | tryptophan permease TERM 4415 3301924 - 3301958 + r 82 -7.8 -4.55798 | opp_overlap 3301930, overlap 3301926 3301928 3301930 AGTACAAAAGAAATA AAAAAAGCCCCGATTG TGA CGATCGGGGCTGTATA TTTTACTTTACGCTG TERM 4416 3301926 - 3301956 + r 84 -10.4 -3.88396 | opp_overlap 3301930, overlap 3301924 3301928 3301930 TACAAAAGAAATAAA AAAAGCCCCGATTG TGA CGATCGGGGCTGTA TATTTTACTTTACGC TERM 4417 3301928 - 3301954 + r 90 -13 -3.51998 | opp_overlap 3301930, overlap 3301926 3301924 3301930 CAAAAGAAATAAAAA AAGCCCCGATTG TGA CGATCGGGGCTG TATATTTTACTTTAC TERM 4418 3301952 - 3301930 - R 100 -13.4 -6.11392 | opp_overlap 3301928 3301926 3301924 3301930 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT TERM 4419 3301930 - 3301952 + r 100 -15.6 -3.31476 | opp_overlap 3301930, overlap 3301928 3301926 3301924 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT STY3461 3303885 - 3301996 - | ATP-dependent RNA helicase DeaD TERM 4420 3302717 - 3302727 + g 73 -5.4 -4.56597 | overlap 3302704 AGTTGCTGCTGAACT TTCG CGG CGAA TTTTTCCAGACGGCG TERM 4421 3304030 - 3304005 - R 73 -7.5 -4.04023 | overlap 3304006 ATTAACGAACAACAA CGCCCTCACCC GCGA AGGTGATGGCA ATCAAAAAGATTACG STY3462 3304948 - 3304064 - | lipoprotein NlpI TERM 4422 3305046 - 3305026 - R 100 -16.1 -3.57792 | opp_overlap 3305019 CCAGCCAGGTCTAAA GCCCCCCGC ACT GCGGAGGGC AAAAGGCTACCTTAC pnp 3307193 - 3305058 - | polynucleotide phosphorylase/polyadenylase TERM 4423 3307396 - 3307412 + r 71 -10.8 -2.71422 | opp_overlap 3307396, overlap 3307395 3307393 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC TERM 4424 3307412 - 3307396 - R 100 -10.8 -5.00884 | opp_overlap 3307395 3307393 3307396 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC rpsO 3307704 - 3307435 - | 30S ribosomal protein S15 TERM 4425 3307539 - 3307560 + g 84 -2.9 -5.34555 | opp_overlap 3307532 3307541, overlap 3307541 3307542 AAACCATACGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTATGCTCTGC truB 3308799 - 3307855 - | tRNA pseudouridine synthase B TERM 4426 3308070 - 3308043 - G 71 -8.4 -3.77588 | opp_overlap 3308048, overlap 3308045 ACGGCAGATTAACAA CAGGATAGTCCG AAGC CGGACTATCCAT TGGCATCAATAATGG TERM 4427 3308068 - 3308045 - G 95 -15.4 -3.46982 | opp_overlap 3308048, overlap 3308043 GGCAGATTAACAACA GGATAGTCCG AAGC CGGACTATCC ATTGGCATCAATAAT TERM 4428 3308656 - 3308688 + g 75 -12.6 -2.6176 | overlap 3308655 GCCGGTCGCCAGCGG GTCCAGCGCGCCGG TATGC CCGGCGCGGTTGGC ATTGTAGATGCGCTT rbfA 3309200 - 3308799 - | ribosome-binding factor A TERM 4429 3309244 - 3309230 - R 100 -9.2 -5.61913 | opp_overlap 3309230 AATAAAGACAAAAAA GGGGCC ATA AGCCCC TTTTTAAATTTCTTG TERM 4430 3309230 - 3309244 + r 88 -8.5 -4.86939 | opp_overlap 3309230 AATAAAGACAAAAAA GGGGC CATAA GCCCC TTTTTAAATTTCTTG infB 3312099 - 3309421 - | translation initiation factor IF-2 TERM 4431 3311287 - 3311298 + g 84 -5.8 -5.00616 | ATCGGCTTTGGATTC GGCA TGTT TGCC TTTTTTCGCCGGACG TERM 4432 3311950 - 3311940 - G 71 -8.2 -3.86015 | TATCGGGGCCAGAAA CCGC TTC GCGG TTCAGGTGCGCCAGT nusA 3313626 - 3312124 - | transcription elongation factor NusA TERM 4433 3313567 - 3313578 + g 75 -3.6 -4.8622 | TTCAAAAATTTTTTC GCGT GGCA GCGC TTTTTCGTTGGAGAC STY3469 3314106 - 3313654 - | hypothetical protein TERM 4434 3314143 - 3314131 - H 93 -6.9 -5.80248 | opp_overlap 3314130 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4435 3314187 - 3314172 - H 100 -10.4 -5.60689 | opp_overlap 3314172 3314171 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA TERM 4436 3314172 - 3314187 + H 72 -10.4 -2.79878 | opp_overlap 3314172, overlap 3314171 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA argG 3314734 - 3316077 + | argininosuccinate synthase TERM 4437 3316094 - 3316109 + T 100 -11.8 -5.24129 | CATTTATCATTCTAA GGCCGC GAAA GCGGCC TTTTTTATGCGCGGA TERM 4438 3316268 - 3316234 - T 82 -11.7 -3.39301 | gap 1, opp_overlap 3316244, overlap 3316244 ATCACAAATAACAGA CGAAAAAAAAGACGCT TTTC AGCGTC-TTTCTTTCG GAATATTGGTACCGA TERM 4439 3316259 - 3316244 - T 100 -9 -5.92337 | opp_overlap 3316244, overlap 3316234 ACAGACGAAAAAAAA GACGCT TTTC AGCGTC TTTCTTTCGGAATAT TERM 4440 3316244 - 3316259 + T 86 -9 -4.43208 | opp_overlap 3316244 3316234 ACAGACGAAAAAAAA GACGCT TTTC AGCGTC TTTCTTTCGGAATAT secG 3316707 - 3316375 - | preprotein translocase subunit SecG TERM 4441 3316910 - 3316895 - R 79 -11.8 -3.14132 | opp_overlap 3316895 TTTTGCGGGCAGTAA GGCGGC AACC GCCGCC TTTTTAGTCACTTAA TERM 4442 3316895 - 3316910 + r 100 -11.8 -4.77157 | opp_overlap 3316895 TTTTGCGGGCAGTAA GGCGGC AACC GCCGCC TTTTTAGTCACTTAA glmM 3318267 - 3316930 - | phosphoglucosamine mutase folP 3319108 - 3318260 - | dihydropteroate synthase TERM 4443 3319173 - 3319154 - R 100 -12.8 -5.86609 | opp_overlap 3319154 TTAAAAAAAGAAAAA CCCCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA TERM 4444 3319154 - 3319173 + r 79 -10.6 -3.6502 | opp_overlap 3319154 TTAAAAAAAGAAAAA CCCCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA hflB 3321147 - 3319213 - | ATP-dependent metalloprotease rrmJ 3321877 - 3321251 - | 23S rRNA methyltransferase J TERM 4445 3321779 - 3321791 + g 77 -4.7 -4.84761 | opp_overlap 3321770 3321773, overlap 3321773 TTTAAACCAGGCACG GGAGC GTA GCCCC TTTTTCTGCGCCTGT TERM 4446 3322045 - 3322028 - g 90 -4.9 -5.34309 | gap 1 AGTACTAAACAAAAA CAGCACCT AAA AGGT-CTG GCACATCCGCTCAAG STY3476 3321965 - 3322297 + | RNA-binding protein YhbY TERM 4447 3322383 - 3322410 + T 86 -13.6 -3.25946 | gap 1, opp_overlap 3322390, overlap 3322390 CACGCTCTCTCCGTT GATAAAAGGCCGC TAT GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4448 3322390 - 3322404 + T 100 -12.8 -5.13137 | opp_overlap 3322390, overlap 3322383 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA TERM 4449 3322404 - 3322390 - T 95 -12.8 -4.36914 | opp_overlap 3322383 3322390 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA greA 3322929 - 3322453 - | transcription elongation factor GreA TERM 4450 3322491 - 3322502 + g 77 -7.2 -4.25104 | CTTCGTATTCCACAT CGCC GCCA GGCG TTTTGATCACCACGA TERM 4451 3323059 - 3323032 - H 70 -4.8 -4.46828 | AGAAGCAAAAAAACA CCAACCCGGG CGCGCAGT CCCAGGTCAG CTACAATTTCCTCTT TERM 4452 3323648 - 3323618 - g 71 -7.4 -3.97947 | GCCAGCCACGATAAA GCGCCAGGCTGGCC GTG GAACGACCTGACGC AGTGTTTCAGCGCGC STY3479 3323177 - 3324610 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 4453 3324669 - 3324698 + T 76 -7.7 -4.37092 | opp_overlap 3324674, overlap 3324674 3324692 CTACAAAGAACATAA TAAAACGGGCCGC AAAT GCGGCCCGTTGGC TTTTGTAGGCCGGAT TERM 4454 3324674 - 3324693 + T 100 -16.4 -3.41587 | opp_overlap 3324674, overlap 3324669 3324692 AAGAACATAATAAAA CGGGCCGC AAAT GCGGCCCG TTGGCTTTTGTAGGC TERM 4455 3324693 - 3324674 - T 100 -16.4 -4.94147 | opp_overlap 3324669 3324674 3324692 AAGAACATAATAAAA CGGGCCGC AAAT GCGGCCCG TTGGCTTTTGTAGGC obgE 3325913 - 3324741 - | GTPase ObgE TERM 4456 3325091 - 3325107 + g 71 -7.9 -3.94933 | opp_overlap 3325080, overlap 3325088 3325093 ACCAGCGCGGTTTAG CCGCCAG ATC CTGGCTG TATTTTTCCAGTTCG STY3481 3326894 - 3325929 - | hypothetical protein TERM 4457 3326705 - 3326718 + g 75 -3.7 -4.91852 | opp_overlap 3326705 GCTTACGAAAAATAC GCAGC GGCG GCAGC TTTCTTTTTACTGCC TERM 4458 3326995 - 3326975 - R 100 -14 -4.75174 | opp_overlap 3326975 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG TERM 4459 3326975 - 3326995 + r 100 -14 -3.794 | opp_overlap 3326975 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG rpmA 3327281 - 3327024 - | 50S ribosomal protein L27 rplU 3327612 - 3327301 - | 50S ribosomal protein L21 TERM 4460 3328777 - 3328753 - g 76 -9.3 -3.95051 | opp_overlap 3328759, overlap 3328745 GAAGAAGCCGACAAA GCGATATCCGC GTT GCAGATATTGC CGGATACCCCATGGC ispB 3327871 - 3328842 + | octaprenyl diphosphate synthase nlp 3329075 - 3329362 + | DNA-binding transcriptional regulator Nlp TERM 4461 3329404 - 3329375 - T 95 -12.2 -4.08692 | opp_overlap 3329378, overlap 3329378 TAAGTGCCTGTAAAA CAACCCCCGCAA TCGCGT TCGCGGGGGTTA TTCAGCGTACAGAAG TERM 4462 3329378 - 3329401 + T 75 -9.6 -3.63515 | gap 1, opp_overlap 3329375 3329378 GTGCCTGTAAAACAA CCCCCGC-AAT CGC GTTCGCGGGGG TTATTCAGCGTACAG TERM 4463 3329401 - 3329378 - T 95 -11.7 -4.17048 | opp_overlap 3329378, overlap 3329375 GTGCCTGTAAAACAA CCCCCGCAA TCGCGT TCGCGGGGG TTATTCAGCGTACAG murA 3330680 - 3329421 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase STY3487 3331027 - 3330734 - | hypothetical protein TERM 4464 3331152 - 3331170 + r 71 -10.3 -2.62192 | opp_overlap 3331118, overlap 3331151 3331147 TCATGCGAAGTGTAG GCCGGAT AAACC ATCCGGC ATTCATTACATACGG STY3488 3331472 - 3331176 - | anti-sigma factor antagonist TERM 4465 3331256 - 3331272 + g 74 -2.1 -5.12617 | opp_overlap 3331232, overlap 3331257 TAACGCCAGACAGCG ACACGGC ATT GCCCTGC TTTTTTGCCTGGTTC STY3489 3332107 - 3331472 - | hypothetical protein STY3490 3332677 - 3332126 - | hypothetical protein STY3491 3333464 - 3332682 - | hypothetical protein TERM 4466 3332768 - 3332729 - G 70 -10 -3.3164 | gap 1, opp_overlap 3332741 AATCCAGCCCCAGAA CGGCCAACGATGCGTGAAC CAC GGT-ACGCGTCGTTGCCCG GCTAATCCCGGCAGA TERM 4467 3333336 - 3333323 - G 74 -8.1 -4.0162 | opp_overlap 3333327, overlap 3333308 CGCCCACATTATAAA GCTGG CGCA CCAGC AGCGGCGCATGTTTG STY3492 3334284 - 3333472 - | putative ABC transporter ATP-binding protein YrbF TERM 4468 3335237 - 3335199 - g 74 -7.4 -4.07568 | opp_overlap 3335198 3335197, overlap 3335207 GCCGGCGTGCGAAAA GGCGAAAATGATATTGCC GTT GGTAATCTCATTGGCGCC AATATTTTTAATCTC STY3493 3334497 - 3335474 + | putative calcium/sodium:proton antiporter STY3494 3335488 - 3336474 + | D-arabinose 5-phosphate isomerase TERM 4469 3336822 - 3336800 - g 74 -9.8 -3.66844 | opp_overlap 3336805 GGGACAGTCGAATAA GCTGATCGCC TTT AGCGATCTGC TGGAAAAACTGGCCA STY3495 3336495 - 3337061 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase STY3496 3337058 - 3337633 + | hypothetical protein TERM 4470 3338037 - 3338023 - g 73 -5.7 -4.37886 | TTACCGGCGACAAAA TCACC TACCT GGTGA AAGAGCAGAAAATGC TERM 4471 3338138 - 3338124 - g 76 -3.4 -5.05037 | overlap 3338125 CAAGACAAAAACAAA GGCCAG ACT CCGGCG CAAAAGAAGAGTAAC STY3497 3337638 - 3338156 + | hypothetical protein TERM 4472 3338723 - 3338694 - g 71 -4.9 -4.55287 | overlap 3338696 GTTATCGACATAAAA CGCATTATCGAGC ATCT GCGCGATAGTGGG CTCGGCGTGCTGATC STY3498 3338163 - 3338888 + | putative ABC transporter ATP-binding protein YhbG TERM 4473 3339940 - 3339930 - g 74 -3.2 -4.84017 | overlap 3339918 3339939 AATGGCTGATAAAAA GCCT TGA AAGC CGTAACGACACGCTG rpoN 3338936 - 3340369 + | RNA polymerase factor sigma-54 STY3500 3340392 - 3340679 + | putative sigma(54) modulation protein TERM 4474 3340707 - 3340733 + F 95 -13 -3.92522 | overlap 3340702 3340708 TTAGCCAGTGCAGGA CGGCCTGTTGTG TGA CACAACGGGCCA TTTGTACAGTTAGCG TERM 4475 3340708 - 3340732 + F 100 -16.5 -2.95192 | overlap 3340702 3340707 TAGCCAGTGCAGGAC GGCCTGTTGTG TGA CACAACGGGCC ATTTGTACAGTTAGC ptsN 3340797 - 3341288 + | sugar-specific enzyme IIA component of PTS STY3502 3341334 - 3342188 + | hypothetical protein TERM 4476 3342239 - 3342220 - g 70 -9.2 -3.75105 | overlap 3342213 TGAAGTCACCAATAA GCTGGGCA TGCA TGCCCGGC CTGCCATGAAGCTTT ptsO 3342185 - 3342457 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) STY3504 3342702 - 3343334 + | hypothetical protein mtgA 3344137 - 3343409 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 4477 3343506 - 3343475 - G 75 -13 -2.59431 | opp_overlap 3343503, overlap 3343471 3343496 3343503 CTGGCGCATAATCCA CGCCTGCCGGCTAC GCAC ATAGCCAGAAGGCG CATTCGCCTTATAGC TERM 4478 3344056 - 3344019 - G 87 -8.3 -4.58663 | overlap 3344042 ATCACCGCCGAAAAA GGCACCGGAACCACGCT AAAC AGCGCAATGCCGCCGCC CCAAAAGACGGCGAG TERM 4479 3344114 - 3344128 + g 73 -9.2 -3.84246 | opp_overlap 3344109 GCGCAAAAACGTTAA CGGCGC GAT GCGTCG TTTGCTCATTCCGCC STY3506 3344787 - 3344134 - | isoprenoid biosynthesis protein TERM 4480 3344994 - 3345016 + r 100 -7.6 -5.77853 | overlap 3344995 3344997 TGGCGCAGTATTCGC GCACCCCGGT CAA ACCGGGGTCA TTTTTTTTCCGCGTT TERM 4481 3344995 - 3345015 + r 89 -11.1 -4.05085 | overlap 3344994 3344997 GGCGCAGTATTCGCG CACCCCGGT CAA ACCGGGGTC ATTTTTTTTCCGCGT TERM 4482 3344997 - 3345013 + r 93 -13.7 -3.60685 | overlap 3344995 3344994 CGCAGTATTCGCGCA CCCCGGT CAA ACCGGGG TCATTTTTTTTCCGC arcB 3347350 - 3345014 - | aerobic respiration control sensor protein ArcB TERM 4483 3346157 - 3346147 - G 70 -5.4 -4.44974 | TCAAATTCCATAAAA TCTG GCG CAGA CGCGTTCCGTCGGTA STY3508 3348372 - 3347443 - | hypothetical protein TERM 4484 3349554 - 3349542 - g 71 -4.8 -4.67353 | CGACGCATTGAAAAA CGTC TGCAG GACG ACAAAGATTTCTACG TERM 4485 3350220 - 3350208 - g 80 -10.5 -3.86822 | GAAGTGGTCGAGAAA GGCCG CGT CGGCC CAGGCGAGCTGATGG TERM 4486 3351367 - 3351351 - g 74 -10.8 -3.55622 | CTGAATCTCTCCAAA CGCGCC TGGCT GGCGCG CAAACCCATTAGCCC TERM 4487 3351852 - 3351838 - g 71 -11.4 -2.90573 | overlap 3351837 TGATTCAGATTAAAG TCGCGC AGG GCGCGA AACCGGGCGAAGGCG gltB 3349044 - 3353504 + | glutamate synthase subunit alpha gltD 3353514 - 3354932 + | glutamate synthase subunit beta TERM 4488 3355368 - 3355384 + G 83 -7.9 -4.56597 | opp_overlap 3355370, overlap 3355370 TCGGTAGATTTAAGT CAGCGCT ATA AGCGCGG TTTTTCCAACAGAAA TERM 4489 3355476 - 3355441 - g 100 -17.2 -3.06696 | gap 1, opp_overlap 3355447, overlap 3355447 TTTGTTTTCAACACA TTGAA-ATTCCGCAGAC ACT GTCTGCGGAATCTTCAA ATCTCATACCGCTCG TERM 4490 3355469 - 3355447 - g 100 -16.4 -3.76775 | opp_overlap 3355447, overlap 3355441 TTCAACACATTGAAA TTCCGCAGAC ACT GTCTGCGGAA TCTTCAAATCTCATA TERM 4491 3355447 - 3355469 + G 100 -16.4 -3.08438 | opp_overlap 3355447 3355441 TTCAACACATTGAAA TTCCGCAGAC ACT GTCTGCGGAA TCTTCAAATCTCATA STY3512 3355140 - 3356243 + | hypothetical protein TERM 4492 3357041 - 3357051 + G 91 -6.8 -5.1675 | AGCGCCGTACTGATT GCGA TGG TCGC TTTTTTCCTCGGTAA codB 3356360 - 3357613 + | cytosine permease codA 3357600 - 3358880 + | cytosine deaminase STY3515 3359429 - 3358962 - | hypothetical protein STY3516 3360301 - 3359426 - | N-acetylmannosamine kinase TERM 4493 3361020 - 3360994 - R 77 -9.4 -3.86346 | overlap 3360996 CTACTCCCTTACAAA TATTGCCCGGTT GAA AACCGGGCAAGC GGATTAACTTTTCGT TERM 4494 3361018 - 3360996 - R 100 -16.4 -3.52113 | overlap 3360994 ACTCCCTTACAAATA TTGCCCGGTT GAA AACCGGGCAA GCGGATTAACTTTTC nanT 3362514 - 3361024 - | putative sialic acid transporter TERM 4495 3361691 - 3361665 - G 71 -11.6 -2.92386 | overlap 3361662 3361660 GGAAAGCAAACAGTA CCACCAGCATCA GCA TGACGCCAGTGG GCCAGCGTTTACCGC nanA 3363523 - 3362630 - | N-acetylneuraminate lyase TERM 4496 3363650 - 3363665 + r 79 -3.2 -5.32608 | overlap 3363644 AACCGGGATCGGAGG TGCGAT CGCT ACCGCA TTTTTTGACTTTTTT STY3521 3364449 - 3363658 - | transcriptional regulator NanR TERM 4497 3364532 - 3364557 + r 76 -7.5 -4.25256 | opp_overlap 3364536, overlap 3364536 GCGAGGAGACCAAAC AAAACAGGCCC TTCA GGGCCTGTTGA TTATTTTACTACGCG TERM 4498 3364553 - 3364536 - R 100 -12.7 -4.97158 | opp_overlap 3364536 3364532 GGAGACCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA TERM 4499 3364536 - 3364553 + r 93 -12.7 -3.70405 | opp_overlap 3364536, overlap 3364532 GGAGACCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA sspB 3365058 - 3364558 - | ClpXP protease specificity-enhancing factor sspA 3365702 - 3365064 - | stringent starvation protein A TERM 4500 3365978 - 3365965 - R 100 -9.5 -5.60993 | opp_overlap 3365965 TTGCCCATAAAAAAA CCCGC CAAA GCGGG TTTTTTCGCTAACAG TERM 4501 3365965 - 3365978 + r 100 -9.5 -5.08824 | opp_overlap 3365965 TTGCCCATAAAAAAA CCCGC CAAA GCGGG TTTTTTCGCTAACAG rpsI 3366409 - 3366017 - | 30S ribosomal protein S9 rplM 3366853 - 3366425 - | 50S ribosomal protein L13 STY3526 3368278 - 3367154 - | putative ATP/GTP-binding protein TERM 4502 3368064 - 3368090 + g 81 -6.6 -4.68994 | CACATATACAGCCCG CGAACCGG TATTTGCGCGT CCGGTTCG TTTTTGCCTAATAAT STY3527 3368465 - 3368869 + | cytochrome d ubiquinol oxidase subunit III TERM 4503 3368894 - 3368912 + F 79 -11.7 -3.13082 | opp_overlap 3368892, overlap 3368892 3368890 GTTAAGAAATTTATC GGGCGCA TCGCT TGCGCCC TCTCTCTATCTTTCC TERM 4504 3369511 - 3369536 + G 78 -11.7 -3.23984 | opp_overlap 3369510 3369509, overlap 3369492 3369534 CGATTCCGACAAACT CCGCGTCGGCG ATTT CGCCGTGGCGG TTGGTAATCCGTTTG TERM 4505 3370250 - 3370224 - g 77 -3.5 -5.02476 | opp_overlap 3370225, overlap 3370225 3370227 ATAGCGTCGAAAAAA GCAGTCCTGCC GCGCA GGCCGGTTTGC AAAAAGATGATGTTA TERM 4506 3370270 - 3370256 - g 83 -7.2 -4.56597 | GCCGGTTTGCAAAAA GATGAT GTT ATCATC GGCGTTAATCGCGAT degQ 3369026 - 3370393 + | serine endoprotease degS 3370486 - 3371556 + | serine endoprotease TERM 4507 3371581 - 3371559 - T 93 -10.6 -4.54727 | opp_overlap 3371562 GGCGTCAAACTAAAA CGACGCAG CTTTTGC CTGCGTCG TTCGACGGCTAGTCA TERM 4508 3371772 - 3371789 + T 71 -7 -4.07568 | GTTGCGCCTGTTGAC GCGCAT ACTGCG ATGCGC TTTTCCAGGCGACCA oadB 3373643 - 3372342 - | oxaloacetate decarboxylase beta chain TERM 4509 3372500 - 3372529 + g 74 -2.8 -4.92757 | gap 1, overlap 3372505 CCATCGGCACTGCCG ACACCCCGGCTGA ACCTA TCAGC-GGGTTGA TTTTGTTCTTACTGC oadA 3375431 - 3373656 - | pyruvate carboxylase subunit B TERM 4510 3375184 - 3375208 + g 88 -11.3 -4.1196 | CCGAGCAGGTTCTGG CCGCGCAGCAG CAT CTGCAGCGGGG TTTTGGGCATGGCTT oadG 3375689 - 3375447 - | oxaloacetate decarboxylase subunit gamma ttdB 3376462 - 3375845 - | L(+)-tartrate dehydratase subunit beta ttdA 3377361 - 3376462 - | tartrate dehydratase subunit alpha STY3536 3378746 - 3377394 - | membrane transporter TERM 4511 3378119 - 3378130 + g 78 -5.8 -4.74706 | TGCCGCAGATGAGCA TCGG GAGA CCGA TTTTTGCGTATTCAA STY3537 3379478 - 3378873 - | transcriptional regulator STY3538 3380154 - 3379525 - | GntR family transcriptional regulator TERM 4512 3380055 - 3380073 + g 75 -5.9 -4.66537 | CCGCAATACTTCCCT GCGCGAG TTCTT CTCCCGC TTTTATATTGCCGGA TERM 4513 3380257 - 3380238 - R 95 -12.8 -3.98913 | overlap 3380250 TTTATAGTTAAAGAA GCCGGAGC AAAA GCCCCGGC ATCGGGCAGGAACAG mdh 3381212 - 3380274 - | malate dehydrogenase TERM 4514 3380442 - 3380428 - G 70 -5.6 -4.38927 | GGCTGAGAGAAGAAA CGGGCA TAC TGACCG TCGCCTTCCACATAG TERM 4515 3380780 - 3380790 + g 75 -4 -4.95155 | opp_overlap 3380764 CCAGCGTGGTAACGC CAAA CAG TTTG TTTTTGTCGTATACG argR 3381626 - 3382096 + | arginine repressor TERM 4516 3382101 - 3382131 + F 74 -6 -4.64766 | overlap 3382103 AAGAGCTTTAGTCCC ACTTCCTCCGTCGT CGT ACGGCGGAGGCATC TTTTTGCCCTCTCCC TERM 4517 3382103 - 3382129 + F 95 -13 -3.93817 | overlap 3382101 GAGCTTTAGTCCCAC TTCCTCCGTCGT CGT ACGGCGGAGGCA TCTTTTTGCCCTCTC TERM 4518 3382335 - 3382325 - f 79 -2.6 -5.27923 | opp_overlap 3382325, overlap 3382330 TAACGTTATAAAAAA TAAA ATT TTTA ATGTCTTTAAAAAGC TERM 4519 3382348 - 3382330 - f 85 -3.3 -5.49579 | opp_overlap 3382325, overlap 3382325 TTATAAAAAATAAAA TTTTTAA TGTCT TTAAAAA GCAGAAACAATTAGC STY3542 3382461 - 3382724 + | hypothetical protein STY3543 3382828 - 3383094 + | hypothetical protein TERM 4520 3383121 - 3383139 + T 100 -13.1 -5.47914 | CTAACCCGACGACTT GCCCCCG CATGC CGGGGGC TTTTTTATGCTTTTT STY3544 3383426 - 3383154 - | hypothetical protein TERM 4521 3383370 - 3383383 + g 74 -6.7 -4.3623 | CGTCTGCGTAAACTC GCGAT AAAA ATCGC TTTGGTTTTTAATAT TERM 4522 3383446 - 3383459 + r 72 -6.7 -4.30576 | overlap 3383444 AGCCACCATCCCCGA CAGAC AATT GTCTG TTTTACTACTAAGCA TERM 4523 3383516 - 3383533 + r 74 -3.3 -5.03994 | AAACGCTTTTAGCCC CGGAGCA CTCT TGCGCTG TTTTTGTATCTCAAA TERM 4524 3383587 - 3383569 - R 100 -8.1 -5.65177 | opp_overlap 3383569 ATAGTCATAAAAAAA CCGACGC TTTTG GCATCGG TTCTTGTGGATTAGC yhcP 3385565 - 3383598 - | p-hydroxybenzoic acid efflux subunit AaeB yhcQ 3386503 - 3385571 - | p-hydroxybenzoic acid efflux subunit AaeA TERM 4525 3386150 - 3386191 + g 72 -3.5 -4.72272 | gap 1, overlap 3386151 3386178 CTCTTCCCGGGACAT CGCCTGTACGCCGAGGCG ATTACGG CGAC-CGGCTTCCTGGCG TTTTTCCTGCGCCAG TERM 4526 3386391 - 3386379 - G 86 -10.5 -4.08394 | ACATCGGCGCTAAAA CGCGC GTC GCGCG TCCAGGGTGATTCGG STY3546a 3386714 - 3386511 - | hypothetical protein STY3547 3386896 - 3387825 + | putative DNA-binding transcriptional regulator tldD 3389393 - 3387948 - | protease TldD TERM 4527 3388772 - 3388805 + g 70 -8.7 -3.69332 | gap 1, opp_overlap 3388773, overlap 3388773 AATACTCATAACCAA AGCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGCG TTTACCGTCTTCTTC TERM 4528 3388773 - 3388804 + g 72 -12.2 -2.80876 | gap 1, opp_overlap 3388773, overlap 3388772 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4529 3388804 - 3388773 - G 90 -12.2 -4.0127 | gap 1, opp_overlap 3388773 3388772 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4530 3389049 - 3389065 + g 74 -4.4 -4.75776 | gap 1 GTAGAGCGGCTGATG CGCTACG GCGG CG-AGCG TTTTTACCTTGCCTT STY3549 3393338 - 3389538 - | hypothetical protein rnG 3394918 - 3393449 - | ribonuclease G TERM 4531 3393661 - 3393672 + g 75 -5.8 -4.62069 | opp_overlap 3393659 3393661 TGATCTCATAGCAGA CGGT TTCC ACCG TTTTTACCGTCCCGC TERM 4532 3394077 - 3394092 + g 80 -9 -4.20136 | AGTTCAACTTTACGC TCCAGC GCGC GCTGGA TTTCATTTTCCACGT TERM 4533 3394275 - 3394254 - G 71 -10.1 -3.55444 | TGCGCATCGGCGAAA TCGCGCAGC ACGC GCTGCGCCA GCGCCAGTTCGCCAT TERM 4534 3394303 - 3394316 + g 71 -4.5 -4.62783 | CATACATCTGGTAGC GCGTT TGCG GACGC TTTTTGCGCTCCATG maf 3395501 - 3394908 - | Maf-like protein TERM 4535 3395242 - 3395256 + g 70 -7 -4.08216 | overlap 3395243 ATTTCTGCGGCATGA GCGGCG TCG CGCGGC TTTTCCAGCACCTCG mreD 3396001 - 3395510 - | rod shape-determining protein MreD mreC 3397053 - 3396001 - | cell wall structural complex MreBCD transmembrane component MreC TERM 4536 3396730 - 3396759 + g 71 -7.7 -3.96148 | overlap 3396738 ACGCAGCGGCGACCC CAGCAGCTCGCGC AACC GCGCGTTCTCCTG TTTGTACTGCCCCAG TERM 4537 3396738 - 3396751 + g 71 -9.5 -3.59024 | overlap 3396730 GCGACCCCAGCAGCT CGCGC AACC GCGCG TTCTCCTGTTTGTAC TERM 4538 3396778 - 3396790 + g 80 -4.8 -5.03715 | overlap 3396788 GTACTGCCCCAGCAT CAGC AGGTC GCTG TTTTTTAGCAGTAAT TERM 4539 3396807 - 3396823 + g 80 -9.3 -4.11216 | opp_overlap 3396806 3396805 TTTTTAGCAGTAATT CCTGGCG CAG CGCCCGG TTTTCCAGCTCAAGC mreB 3398161 - 3397118 - | rod shape-determining protein yhdA 3400409 - 3398469 - | regulatory protein CsrD TERM 4540 3398635 - 3398612 - G 74 -10.2 -3.53012 | CGCCCGTCGCGTAAA CCTGCGTAGG CGTG CCCGCGCAGG CCTCTACCAGACTTT TERM 4541 3398654 - 3398664 + g 74 -6.8 -4.29845 | CTACCAGACTTTGAA CCAG AAG CTGG TTTTCCGTTCGCTTC TERM 4542 3400983 - 3400995 + G 70 -6.9 -4.08945 | overlap 3400984 3400990 GTAACGCCATGATCA TCGGC ACC GCCGG TTTTACCGCCATGCT yhdH 3400613 - 3401587 + | oxidoreductase TERM 4543 3401739 - 3401749 + G 87 -2.4 -5.60993 | GAAGCCGATGTGACT GCGG AAT CGGC TTTTTTTATGCAGCG TERM 4544 3402001 - 3401991 - g 71 -8.2 -3.85698 | overlap 3401992 TTTGGCCTTGATAAA GCCG ACC CGGC GGCCAATGCCGGAAG STY3557 3401700 - 3402704 + | putative sulfite oxidase subunit YedY STY3558 3402705 - 3403304 + | putative sulfite oxidase subunit YedZ accB 3403698 - 3404168 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 4545 3404534 - 3404497 - g 74 -10.6 -3.53811 | gap 1 TTTATCGGCCCGAAA GCGGACACCAT-CCGCC TGATG GGCGATAAAGTGTCCGC GATTACCGCGATGAA TERM 4546 3404570 - 3404554 - g 81 -3.5 -5.14965 | overlap 3404555 ACCGCGATGAAAAAA GCGGGCG TGC CGACCGT ACCAGGATCTGACGG TERM 4547 3404679 - 3404656 - g 73 -9.4 -3.78775 | opp_overlap 3404676 3404677 CCGGTGATCATCAAA GCGTCCGGCG GCGG CGGCGGCCGC GGTATGCGCGTGGTT accC 3404179 - 3405528 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 4548 3405548 - 3405564 + F 100 -10.8 -5.72622 | opp_overlap 3405548 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG TERM 4549 3405564 - 3405548 - f 87 -10.8 -4.19506 | opp_overlap 3405548 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG STY3561 3405637 - 3405879 + | hypothetical protein TERM 4550 3406692 - 3406712 + G 73 -6.1 -4.4261 | ACCGGGGCATTATTA TCGGTACGA TTG TCGTGGCGA TTTTAATGTTCGGGA panF 3405869 - 3407320 + | sodium/panthothenate symporter TERM 4551 3407394 - 3407424 + G 77 -11.2 -3.57144 | opp_overlap 3407404, overlap 3407399 AGAGCTAAGTGATGC GCTGATGGAAGCGG GCG CCGTTTCCATTACC TTTCAGGATACACAC TERM 4552 3407399 - 3407419 + G 78 -11.9 -3.28001 | opp_overlap 3407404, overlap 3407394 TAAGTGATGCGCTGA TGGAAGCGG GCG CCGTTTCCA TTACCTTTCAGGATA prmA 3407332 - 3408213 + | ribosomal protein L11 methyltransferase TERM 4553 3408223 - 3408242 + F 91 -11.4 -4.36914 | AAATAATTCTTGTCA GCGTGGTC GCCC GGCCACGC TTTTCTCCACACAAC TERM 4554 3408558 - 3408544 - f 80 -5.6 -4.91712 | GGCAATGGAGAAAAA TCACGC GCA GCGGGA AGTGATCTTGTCCTG TERM 4555 3408636 - 3408623 - f 86 -4.5 -5.626 | opp_overlap 3408599 3408623, overlap 3408610 TAGCTTATAAAAAAA GCAGA TTAT TCCGC TTATCTTGTTTCTGG TERM 4556 3408838 - 3408824 - f 76 -4.2 -5.00884 | overlap 3408825 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG yhdG 3408993 - 3409838 + | hypothetical protein fis 3409864 - 3410160 + | DNA-binding protein Fis TERM 4557 3410215 - 3410190 - f 74 -6 -4.56597 | opp_overlap 3410190 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATT TERM 4558 3410190 - 3410215 + F 100 -8.2 -5.25803 | opp_overlap 3410190 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATT TERM 4559 3410414 - 3410424 + G 75 -6.8 -4.40358 | ATGGTGGAATCCTGG GACG AAG CGTC TTTTCTGGCCTGGCT yhdJ 3410246 - 3411130 + | putative methyltransferase TERM 4560 3412974 - 3413007 + G 84 -12.5 -3.43492 | GGCGTACTGAATCCT GACCAGTTTTTACCG CTGG CGGAAAAAACGGGTC TTATCGTCACTATCG STY3568 3411528 - 3413138 + | hypothetical protein TERM 4561 3414045 - 3414068 + F 73 -11 -2.60496 | overlap 3414044 3414042 GATTCTATCAGCCGT CTGAACGGCG TGGG CGACGTTCAG CTATTTGGCGCACAG TERM 4562 3414403 - 3414393 - f 72 -8.2 -3.67976 | overlap 3414394 CGCATTAACGGTAAA CCGG CCT CCGG TCTCGGTATTAAACT TERM 4563 3414480 - 3414510 + F 71 -6.8 -4.1021 | overlap 3414470 3414483 AAACTGGCGGAACTG CAGCCTTTCTTCCC TCA GGGAATGAAGGTGG TTTATCCTTATGACA TERM 4564 3415211 - 3415248 + F 74 -10.5 -3.16492 | opp_overlap 3415241, overlap 3415209 GGTTCTGTTTTTACG CCTCCCGACCTCCTTCC TGCC GGAAGAAGATCAGGGGG TATTCCTGACTATGA TERM 4565 3416683 - 3416668 - f 77 -10.4 -3.32233 | opp_overlap 3416668, overlap 3416666 3416664 TAACCAGTAAACAGA GGCGTC TTCG GACGCC TTTTAAACGGTACGT TERM 4566 3416668 - 3416683 + F 87 -10.4 -4.09864 | opp_overlap 3416668 3416666 3416664 TAACCAGTAAACAGA GGCGTC TTCG GACGCC TTTTAAACGGTACGT yhdV 3416892 - 3417113 + | lipoprotein TERM 4567 3417144 - 3417118 - T 80 -12.2 -3.05769 | opp_overlap 3417123, overlap 3417111 TTTCTAAATGATACA TGCAGGCGCGGC AAT GCCGCGCTTTCA GTAATAATATAAAGG TERM 4568 3417123 - 3417139 + T 100 -15.1 -3.6959 | opp_overlap 3417118 3417111 AAATGATACATGCAG GCGCGGC AAT GCCGCGC TTTCAGTAATAATAT TERM 4569 3417470 - 3417456 - T 71 -3.5 -4.88405 | AACTGGCAAATAAAA TAGCC TAATG GGCCA GATTCTTAGTCCTCA TERM 4570 3417757 - 3417744 - T 72 -8.1 -3.727 | GGGAGCAGATTTAAA CGTCG CGTG CGACG GCCCGTCAGGGCGAG TERM 4571 3417896 - 3417930 + T 100 -16.7 -4.55209 | gap 1, opp_overlap 3417896 3417903, overlap 3417903 CATAGAGAGATAAAT GCAAAAAGGCCCAATC TTTC GATTGGGCCTTTT-GC TTTATTTGATGTCTG TERM 4572 3417930 - 3417896 - T 100 -16.7 -3.10967 | gap 1, opp_overlap 3417896 3417903, overlap 3417903 CATAGAGAGATAAAT GCAAAAAGGCCCAATC TTTC GATTGGGCCTTTT-GC TTTATTTGATGTCTG TERM 4573 3417903 - 3417924 + T 100 -14.5 -4.72863 | opp_overlap 3417896 3417903, overlap 3417896 AGATAAATGCAAAAA GGCCCAATC TTTC GATTGGGCC TTTTGCTTTATTTGA TERM 4574 3417924 - 3417903 - T 100 -14.5 -4.85433 | opp_overlap 3417903 3417896, overlap 3417896 AGATAAATGCAAAAA GGCCCAATC TTTC GATTGGGCC TTTTGCTTTATTTGA TERM 4575 3420998 - 3421016 + T 70 -8.8 -3.35798 | overlap 3421001 TTCACCACTGGCTTA GTGGTGGG GCT CCCACTGC TTGTACGTACACGGT TERM 4576 3421050 - 3421062 + T 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4577 3421604 - 3421628 + T 71 -8 -3.93061 | gap 1, opp_overlap 3421602 3421610, overlap 3421606 3421607 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 4578 3421703 - 3421668 - T 77 -9.2 -4.00532 | opp_overlap 3421679 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA CTGATGGCAACGCCT TERM 4579 3423640 - 3423656 + T 76 -5.1 -4.75954 | TATATTACGCTTTCC CGCTTCA GAG TCAAGCG TTTATTTTCGCTTTT hemG 3424367 - 3423822 - | protoporphyrinogen oxidase trkH 3425830 - 3424379 - | potassium transporter TERM 4580 3425591 - 3425570 - G 86 -7.9 -4.77173 | overlap 3425571 TTCCGAGAAAATAAA CGGCAGCGC ACCC ACGCTGCCC AGCACGGTCCAGAAC TERM 4581 3425590 - 3425571 - G 75 -11.4 -3.45581 | overlap 3425570 TCCGAGAAAATAAAC GGCAGCGC ACCC ACGCTGCC CAGCACGGTCCAGAA yigZ 3426483 - 3425869 - | hypothetical protein pepQ 3427814 - 3426483 - | proline dipeptidase TERM 4582 3429623 - 3429591 - g 72 -4 -4.69027 | gap 1, opp_overlap 3429597 3429607 AAAGTGATGGAAAAA CAGTTCGG-CTGGCC GATG GGCCCGGCCTATCTG CTCGACGTGGTGGGT fadB 3428004 - 3430193 + | multifunctional fatty acid oxidation complex subunit alpha TERM 4583 3430522 - 3430536 + G 70 -7 -4.1347 | CGCGAATGATCATGA CCGGCG ATG CGCAGG TTTGTCTGGTTGGCG TERM 4584 3431102 - 3431085 - g 74 -2.5 -5.00616 | opp_overlap 3431099 CTGGCGTTGAAAAAA GCGGGAC TGTC GGCCAGC GATATCGATGTGTTT fadA 3430203 - 3431366 + | 3-ketoacyl-CoA thiolase TERM 4585 3431456 - 3431423 - T 78 -11.7 -3.09933 | CGGCAACTGAGCGAA TCCCCGGGAACATAG ATAA CTATATGCCCGGGGT GAACAAAGGCAGCCA TERM 4586 3431522 - 3431540 + T 100 -13.1 -5.04385 | TTAGTTGCCGTTTTT CCCGCCC GTCAG GGGCGGG TTTTTTCACCGTGTG STY3579 3433386 - 3431563 - | transferase TERM 4587 3432039 - 3432053 + g 91 -7.2 -5.12707 | CACCCTCACAGCCAC TTTCCT GGC AGGAAA TTTTTTGGCCTTTGC TERM 4588 3432655 - 3432676 + g 74 -2.9 -4.86731 | ACGCTGACCGTAGCC CCACGATAG TGCG CCATCCTGG TTTTGTTTAAAGCCC TERM 4589 3433224 - 3433189 - G 72 -11.2 -3.06915 | overlap 3433209 3433212 ATGCACGTCACGTAA CTGGTAACCGCCATTA CGAA TAACGGCGGTTAGCGG CGCGATATCATAGGG TERM 4590 3433630 - 3433613 - R 100 -12.7 -4.74504 | AGGCTAACGTAAAAA GGGACGC TACT GCGTCCC ATAAAATAGTTAAAT fre 3434341 - 3433640 - | FMN reductase TERM 4591 3434271 - 3434258 - G 73 -5.9 -4.41047 | overlap 3434259 AGCGCGGAATGAAAA CGCCG CGTC CGGCA CTAAACGAACCCGAT TERM 4592 3434359 - 3434377 + r 74 -6 -4.56775 | opp_overlap 3434372 GCTCCCTCTGTCGGG TGTCGG GTCAATA CCGACA TTTTTCAAGCCGAGT yigC 3435905 - 3434427 - | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 4593 3435933 - 3435959 + H 75 -3 -5.13741 | overlap 3435942 GTAAGCGCATCATTA TACGGCGTTC ATCATCG GGATGCTGTA TTTTTGTTAAATTAG TERM 4594 3436223 - 3436203 - g 76 -3.2 -5.02074 | opp_overlap 3436204, overlap 3436204 TCACCCTGGAAAAAA TGGTACGC GGAAA ACGTACCT TCGTCAGCGAACCGC rfaH 3436091 - 3436579 + | transcriptional activator RfaH tatD 3437369 - 3436587 - | DNase TatD TERM 4595 3437384 - 3437409 + r 95 -13.3 -3.94184 | opp_overlap 3437386 3437389, overlap 3437386 TGCTTGCCCCCATAT GACAACCGCCC TGGC GGGCGGTTGTG TTTAGTCTTCAGTGT TERM 4596 3437407 - 3437386 - R 90 -15.9 -2.62184 | opp_overlap 3437386 3437384, overlap 3437389 CTTGCCCCCATATGA CAACCGCCC TGGC GGGCGGTTG TGTTTAGTCTTCAGT TERM 4597 3437386 - 3437407 + r 100 -15.9 -3.55486 | opp_overlap 3437386 3437389, overlap 3437384 CTTGCCCCCATATGA CAACCGCCC TGGC GGGCGGTTG TGTTTAGTCTTCAGT TERM 4598 3437404 - 3437389 - R 82 -11.8 -3.46602 | opp_overlap 3437386 3437384, overlap 3437386 GCCCCCATATGACAA CCGCCC TGGC GGGCGG TTGTGTTTAGTCTTC tatC 3438190 - 3437411 - | TatABCE protein translocation system subunit TERM 4599 3438000 - 3437990 - G 80 -4.6 -5.04385 | overlap 3437991 3437992 GATAGGCGTAAAAAA CGGC GAC GCCA CATCCGTCGCAATCA tatB 3438741 - 3438193 - | sec-independent translocase tatA 3438999 - 3438745 - | twin argininte translocase protein A ubiB 3440845 - 3439205 - | putative ubiquinone biosynthesis protein UbiB TERM 4600 3439553 - 3439563 + g 77 -8.2 -4.08767 | opp_overlap 3439553 CCAGGACTCAAGAAA CGGC TTC GCCG TTTTCCACAAATCAA TERM 4601 3439563 - 3439553 - G 77 -8.2 -4.21974 | opp_overlap 3439553 CCAGGACTCAAGAAA CGGC TTC GCCG TTTTCCACAAATCAA yigP 3441447 - 3440842 - | hypothetical protein ubiE 3442212 - 3441457 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 4602 3442144 - 3442131 - G 72 -2.3 -4.96646 | CCACAGAATGAAAAA CGTGG GCCA CCATG TCAGCTTTCTGCTCT yigN 3443738 - 3442308 - | DNA recombination protein RmuC TERM 4603 3443863 - 3443837 - R 95 -10.9 -4.65895 | opp_overlap 3443842, overlap 3443842 GGCGCCACGCAAAAA GAAAAGGCCGA ACGCG TCGGCCTTTGC AAAAGAGAGGAGAAT TERM 4604 3443842 - 3443858 + r 72 -9.4 -3.53012 | opp_overlap 3443837 3443842 CACGCAAAAAGAAAA GGCCGA ACGCG TCGGCC TTTGCAAAAGAGAGG TERM 4605 3443858 - 3443842 - R 100 -9.4 -5.2853 | opp_overlap 3443842, overlap 3443837 CACGCAAAAAGAAAA GGCCGA ACGCG TCGGCC TTTGCAAAAGAGAGG udp 3444639 - 3443878 - | uridine phosphorylase TERM 4606 3444779 - 3444766 - H 76 -5.3 -4.77036 | overlap 3444770 GTTTACCATTAAAAA GTGAT GTGC ATCAC AATAAATAATCAATA TERM 4607 3445314 - 3445331 + G 76 -2.7 -5.06414 | gap 1, overlap 3445315 CGGCGGGGATGCGCA TCGGCTGA TGA TCA-CCGG TTTTTGTTGGGGAGG ysgA 3444898 - 3445710 + | putative hydrolase TERM 4608 3445793 - 3445807 + T 79 -2.8 -5.41787 | TCGCCACGTTAGCTA TGCTTT ACC ACAGCA TTTTTATATTTTTTG STY3593 3447132 - 3445786 - | putative regulatory protein TERM 4609 3447431 - 3447403 - R 79 -12.5 -2.90688 | gap 1, opp_overlap 3447403 TAATCAGGTCAGACA CGGGCGCTACCC GTCAAA GGGTAGCGCC-G CATTGCTGCCGGATA metE 3449731 - 3447467 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 4610 3448538 - 3448549 + g 91 -7.2 -4.91109 | overlap 3448525 3448524 GTCCTGCGCGGTGAT CGCC GCCA GGCG TTTTTCTACTGCGGC TERM 4611 3450534 - 3450546 + Gr 72 -9.1 -3.51708 | opp_overlap 3450518, overlap 3450529 GCCGGAAGATTTAGC CAGCG AAA CGCTG TTGATTTACCCGGTG yigM 3451720 - 3450821 - | hypothetical protein metR 3449980 - 3450933 + | trans-activator of metE and metH TERM 4612 3451531 - 3451554 + gT 76 -5.2 -4.78149 | CAAGCTGCATCGCCC CCACCAGCAT ATAC AGGCTGATGG TTTTTAGGTTGTGCC yigL 3452601 - 3451801 - | putative sugar phosphatase pldB 3453633 - 3452617 - | lysophospholipase L2 TERM 4613 3453180 - 3453139 - G 100 -13.8 -3.98159 | gap 2, overlap 3453134 TATCACAATACCAAA CATCG-GCGCGGTGAG-CGC AATA GCGTCGCACCGCACACGATG GCGTTGCAGGAACAG rhtB 3453744 - 3454364 + | homoserine/homoserine lactone efflux protein rhtC 3455024 - 3454404 - | threonine efflux system recQ 3456932 - 3455088 - | ATP-dependent DNA helicase RecQ TERM 4614 3455195 - 3455221 + g 71 -7.3 -4.04206 | gap 1, opp_overlap 3455205, overlap 3455217 CGCTTAACATCTCGC TGGCGGAAACCG GCAT CTGTT-CCGCCA TTTCTATCAACGTGG TERM 4615 3456044 - 3456034 - G 70 -6.8 -4.13945 | overlap 3456038 ATGCCCATTCCAAAA GCGA CGG TCGC CACCACGATTTGCAG TERM 4616 3456966 - 3456945 - R 100 -12.3 -4.63479 | CACCATAAATCAAAA CAGGCGCTA TTTT CAGCGCCTG CGAGAGAAACTGCAA pldA 3457870 - 3457001 - | phospholipase A yigI 3458035 - 3458502 + | hypothetical protein TERM 4617 3459286 - 3459304 + G 70 -3.1 -4.72986 | overlap 3459288 GGGCTTTTTCCAGTA TATCGGC CCAAC GCTGATG TTTTTACTGGCGGTG TERM 4618 3459378 - 3459389 + G 71 -5.8 -4.3129 | TTGCGTTTATCTGGG TCGC GCTG GCGA TTTTCGTGATGGATG STY3604 3458546 - 3459430 + | chloramphenicol-sensitive protein RarD TERM 4619 3459493 - 3459464 - f 82 -5.7 -5.11033 | opp_overlap 3459464 TATAATCTGAAAAAA TATGCCTCCCC TTGTAAGG GGGGTAGCATA TTGTCATGCTAACGA STY3605 3459465 - 3459923 + | hypothetical protein TERM 4620 3459974 - 3459998 + G 77 -8 -4.13945 | TGATGGTTCGTTATC TGAAAAATGG AAATA CCGTTTTTCA TTTTACGATCAACAT yigF 3459939 - 3460319 + | hypothetical protein TERM 4621 3460322 - 3460359 + T 79 -11.3 -3.37493 | overlap 3460323 3460354 TTGGAGCCTGTAACT TTTCAGGGTGGTTCAGC CGCA GCTGAATCACCCTGGCC TTAATGTCTTACAGC TERM 4622 3460323 - 3460358 + T 86 -14.8 -2.62175 | overlap 3460322 3460354 TGGAGCCTGTAACTT TTCAGGGTGGTTCAGC CGCA GCTGAATCACCCTGGC CTTAATGTCTTACAG corA 3461318 - 3460368 - | magnesium/nickel/cobalt transporter CorA TERM 4623 3461277 - 3461289 + g 85 -2.6 -5.47399 | CTCCTCGACTTCCAG CCGG GTCAG TCGG TTTTTTTCCAGTTGA uvrD 3463952 - 3461790 - | DNA-dependent helicase II TERM 4624 3462583 - 3462608 + g 100 -11.8 -4.8048 | opp_overlap 3462573 ATAAAGCGTTGCAGC GCGCTGGCCG CACGCC CGGCCAGGGC TTTTTCCTGTAACAA TERM 4625 3463998 - 3463987 - R 87 -7.2 -5.1166 | opp_overlap 3463986 3463988, overlap 3463988 3463989 CATGAAAACTAAAAA CGCC CGGT GGCG CTTCGCTTACCGGGG yigB 3464804 - 3464088 - | flavin mononucleotide phosphatase TERM 4626 3464392 - 3464420 + g 82 -5.2 -5.0133 | overlap 3464382 3464394 AGTTCCGGCTGGGCA TTGCCGTTAGTG ATCGC CACCAGCGGCCA TTTTTTCGCAAGCTG xerC 3465706 - 3464804 - | site-specific tyrosine recombinase XerC yigA 3466410 - 3465703 - | hypothetical protein dapF 3467231 - 3466407 - | diaminopimelate epimerase yifL 3467471 - 3467268 - | putative lipoprotein TERM 4627 3467353 - 3467370 + g 74 -3.3 -4.85599 | overlap 3467355 TGCGAATCGACTTTT TTCGTCG GCGG CGGCGCA TTTTTATCGGCTGGC TERM 4628 3468207 - 3468217 + G 78 -6.8 -4.62441 | overlap 3468197 TGGGCTTGACGCTGC GCGA CGA TCGC TTTCTTTATGTCGAC TERM 4629 3468407 - 3468388 - g 71 -10.6 -3.27544 | overlap 3468398 CAAAATCATCATCAA CGGCGACC AACT GGACGCCG ACCCAGACACCTTTT TERM 4630 3468483 - 3468472 - g 72 -3.6 -4.82901 | CTGGCGCGATAAAAA CGGC TTGC ACCG TCACGTTCTCAACCA TERM 4631 3469179 - 3469158 - g 80 -8.7 -4.14243 | CAGCCTATGTTAAAA CCGATGGCA CCTT TGACATCGG CAAAACAGCGGTTCG TERM 4632 3469197 - 3469185 - g 80 -9.1 -4.13014 | TTGACATCGGCAAAA CAGCG GTT CGCTG GCGCAAGGTTCTGTC STY3614 3467657 - 3469666 + | hypothetical protein TERM 4633 3469714 - 3469701 - g 95 -9.5 -4.6856 | opp_overlap 3469702, overlap 3469690 3469703 TAAACATTTGAAAAA CGCCC TTCG GGGCG TGGGGATCGGTTCAT STY3615 3469681 - 3470034 + | hypothetical protein cyaY 3470104 - 3470424 + | frataxin-like protein STY3617 3470858 - 3470496 - | hypothetical protein TERM 4634 3470637 - 3470651 + g 80 -5.6 -4.95957 | opp_overlap 3470637 AAAAAGTTGACGTAA CGCTGG TGA CCAACG TTTTTCCTTGATTTC STY3618 3471412 - 3470870 - | hypothetical protein TERM 4635 3471605 - 3471592 - R 73 -9.5 -3.30243 | ATGTAGGCTGGATAA GGCGC GTTA GCGCC GCCATCCGGCACAGT STY3619 3471951 - 3471598 - | hypothetical protein cyaA 3474605 - 3472059 - | adenylate cyclase TERM 4636 3475292 - 3475302 + G 74 -8.2 -4.05033 | overlap 3475277 GCGAGCGCGAAGATC CGCG CGA CGCG TTTGTCTCGAATAAA TERM 4637 3475706 - 3475686 - g 72 -11.1 -3.15579 | opp_overlap 3475689 GGAACGTGCTATGAA CACCCGCCT GGA AGGCGGTTG TCAGGTGCCGATTGG TERM 4638 3475689 - 3475703 + G 75 -11.4 -3.32963 | opp_overlap 3475686 ACGTGCTATGAACAC CCGCCT GGA AGGCGG TTGTCAGGTGCCGAT hemC 3474982 - 3475923 + | porphobilinogen deaminase hemD 3475920 - 3476660 + | uroporphyrinogen-III synthase TERM 4639 3476810 - 3476780 - g 83 -9.6 -4.11105 | opp_overlap 3476779 GAAAAAAAGTAAGAA CGGCGCCGCGCT GGTATTA AGCGCGGTGGCG ATCGCGATTGCCCTG TERM 4640 3476898 - 3476884 - g 82 -11.4 -3.84451 | overlap 3476887 CCGCGCAAACGGAAA CCAGCG ATG CGCTGG CGACGCAACTGACCG TERM 4641 3477068 - 3477045 - g 79 -3 -5.24416 | overlap 3477046 GAAGTACAACAAAAA GTCGCCACCA TTTC CGGCAGCGAT GCTAAAACCTGGCTG hemX 3476682 - 3477851 + | putative uroporphyrinogen III C-methyltransferase TERM 4642 3478382 - 3478360 - g 70 -5.4 -4.4078 | overlap 3478361 3478364 GGCGCGCAATGAAAA TCACGCAGCG CGT CACGGCGTGG ACAAACTGCTGGAGG hemY 3477851 - 3479050 + | putative protoheme IX biogenesis protein TERM 4643 3479149 - 3479125 - T 100 -14.3 -5.64274 | GGATGCATAAAAAAA CGCCTGCCC GGTTAAG GGGCAGGCG TCAAAACAGGTCTGT TERM 4644 3479420 - 3479436 + T 79 -9.3 -4.16943 | ACGCGATTGTTATCC CCCCGCC GCT GGCGAGG TTTTAGCGTGTCGCC TERM 4645 3479623 - 3479608 - T 100 -11.8 -5.8901 | ACAGAAAACAAAAAA CCCCGC CGAA GCGGGG CTCAAAATTGGTCGG yifK 3481552 - 3480167 - | putative transport protein YifK TERM 4646 3480555 - 3480535 - G 70 -3.1 -4.70319 | overlap 3480537 3480539 3480541 3480542 CCAGCAAAATCAAAA TAGAGAGCG CCA CGCCCGCGA CCGGCACGCCGTGGC TERM 4647 3480580 - 3480605 + g 95 -10.5 -4.56597 | gap 1, opp_overlap 3480577, overlap 3480581 CGTGGCGAGAGACCT TCG-CAACTGCC GCC GGCAGTTGACGG TTTTTCGCCAGCGCG TERM 4648 3480581 - 3480604 + g 80 -11.8 -3.33744 | gap 1, opp_overlap 3480577, overlap 3480580 GTGGCGAGAGACCTT CG-CAACTGCC GCC GGCAGTTGACG GTTTTTCGCCAGCGC TERM 4649 3481581 - 3481593 + r 79 -9.1 -4.03888 | GTGTTTGCAACGGTT CCGGT AGT ACCGG TTATTGTTATGGGTA rffM 3482499 - 3481759 - | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 4650 3482107 - 3482118 + g 73 -5.8 -4.44548 | AATATTGACGTTCCA CTGC GTCC GCAG TTTTGCTTCCGTCTG rffT 3483854 - 3482496 - | putative entero common antigen polymerase TERM 4651 3483583 - 3483566 - G 70 -9.9 -3.39327 | opp_overlap 3483549 3483548 3483566 GTGGTACATCCACAA CGCGTTT GCGT AAACGCG TTTTATAGGTCACGT TERM 4652 3483566 - 3483583 + g 88 -9.9 -4.42653 | opp_overlap 3483566, overlap 3483549 3483548 GTGGTACATCCACAA CGCGTTT GCGT AAACGCG TTTTATAGGTCACGT STY3628 3484930 - 3483851 - | 4-alpha-L-fucosyltransferase TERM 4653 3484575 - 3484561 - G 70 -5.6 -4.386 | GAAGCGGGTAGAAAA GGCGGA ATT TCAGCC CGTTGGACACTTCGT TERM 4654 3484878 - 3484868 - G 74 -4.6 -4.68593 | opp_overlap 3484868 CGTATCATTGAAAAA CCGC AGC ACGG TGTGGTTATGGTGAG STY3629 3486177 - 3484927 - | putative lipopolysaccharide biosynthesis protein rffA 3487309 - 3486179 - | TDP-4-oxo-6-deoxy-D-glucose transaminase TERM 4655 3486435 - 3486455 + g 74 -7.5 -4.09685 | opp_overlap 3486434 3486436, overlap 3486436 AGTTTGATGTAAAAC ATGTGGGCA TTA TGCCCGCAG TTTTCCGGAATAGAA TERM 4656 3486454 - 3486436 - G 70 -8.8 -3.69216 | opp_overlap 3486436 3486435, overlap 3486434 GTTTGATGTAAAACA TGTGGGCA TTA TGCCCGCA GTTTTCCGGAATAGA TERM 4657 3486436 - 3486454 + g 72 -11 -3.05597 | opp_overlap 3486434 3486436, overlap 3486435 GTTTGATGTAAAACA TGTGGGCA TTA TGCCCGCA GTTTTCCGGAATAGA rffC 3487862 - 3487314 - | TDP-fucosamine acetyltransferase rffH 3488850 - 3487969 - | glucose-1-phosphate thymidylyltransferase TERM 4658 3488011 - 3488024 + g 74 -2.3 -5.03314 | overlap 3488012 CAACTCCAGTAAATA TTGGC CATA GCCGG TTTTTTCAAGCTGAC TERM 4659 3488361 - 3488371 + g 71 -4.6 -4.63218 | CCCAGTTAGATTTAG GCTG TTT CGGC TTTTCTTCCAGCGAG rffG 3489950 - 3488883 - | dTDP-glucose 4,6-dehydratase wecC 3491212 - 3489950 - | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 4660 3490143 - 3490170 + g 74 -10.6 -3.55444 | gap 1, overlap 3490146 GGTTCGACGACCAGG GTTTCG-CCGCTG TGC CAGCGGGCGATAC TTTGCGCGATCCCCA wecB 3492339 - 3491209 - | UDP-N-acetyl-D-glucosamine 2-epimerase TERM 4661 3492383 - 3492360 - R 80 -12.5 -3.06696 | overlap 3492362 TTCTCTTCGAATAGA CAGTAGGGG CCCAGC CCCCTACTG CAGAGGTGTTGCTAA STY3636 3493441 - 3492395 - | lipopolysaccharide biosynthesis protein WzzE rfe 3494556 - 3493453 - | putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase TERM 4662 3494388 - 3494377 - G 71 -5.8 -4.33928 | overlap 3494380 GAGGCCAAACATAAA GCAG ATTC CTGC AAACACAGAAATCCC TERM 4663 3494445 - 3494465 + g 85 -7 -4.89339 | opp_overlap 3494444 GTCGTTTACGAAAGT TTGGTTTA TCCAC TAAACCAA TTTTTATGGCTACTT TERM 4664 3494772 - 3494741 - R 100 -14.6 -4.20696 | opp_overlap 3494747 3494771, overlap 3494747 GGATGAATCGCAAAA CAAAAACGCCACGT AAAA ACGTGGCGTTTTCA GGTAAAGACCAGGTT TERM 4665 3494747 - 3494766 + r 100 -13.6 -4.13767 | opp_overlap 3494741 3494747 ATCGCAAAACAAAAA CGCCACGT AAAA ACGTGGCG TTTTCAGGTAAAGAC TERM 4666 3494766 - 3494747 - R 100 -13.6 -5.46706 | opp_overlap 3494747, overlap 3494741 ATCGCAAAACAAAAA CGCCACGT AAAA ACGTGGCG TTTTCAGGTAAAGAC rho 3496045 - 3494786 - | transcription termination factor Rho TERM 4667 3496454 - 3496404 - R 71 -10.6 -2.74563 | gap 1 CTGATACCTTAATCA TTCGTCGAATGACAGACGC-CTG ACCATA CAGCGCCTTTGTCATTCGACGTA TAAAAGGTATTACGC trxA 3496793 - 3496464 - | thioredoxin TERM 4668 3497685 - 3497667 - g 72 -3.8 -4.73864 | overlap 3497668 CTAATGAAGAGAAAA TGCGTTTA CTG CAAACGCT GATCGAAGAAGAGTG rhlB 3496937 - 3498202 + | ATP-dependent RNA helicase RhlB TERM 4669 3498439 - 3498429 - g 78 -6.8 -4.65916 | CTGACCCGAATAAAA CGCA AGG TGCG TCTGGCCGCGGGTCT gppA 3498321 - 3499802 + | guanosine pentaphosphate phosphohydrolase rep 3501866 - 3499842 - | ATP-dependent DNA helicase Rep TERM 4670 3501955 - 3501930 - R 86 -13.3 -3.32202 | overlap 3501928 GAGGCCCAGAGAAGA CCAGGCTGCTT TTTC AGGCAGCCTGG AAAAGGTCAATCAGC STY3643 3502697 - 3501966 - | putative membrane transport protein STY3644 3503437 - 3502694 - | uridine phosphorylase TERM 4671 3502735 - 3502754 + g 84 -13.6 -3.10464 | opp_overlap 3502726 3502727, overlap 3502727 AATAAATGGCCTGAA GCGCCAGA GAAA TCTGGCGC TCTTCACCTTGCTGG TERM 4672 3503369 - 3503346 - G 78 -5.9 -4.71426 | GCCTTATCAAGAAAA CGGGCGATT CTATCC ACCCGCCCG GGATCGCCGGGCAAA STY3645 3503893 - 3503465 - | hypothetical protein TERM 4673 3503792 - 3503747 - G 71 -4.6 -4.56597 | gap 1 CTGTTGGCTGAAAAA CCGC-AGCATTCGCTGGTTAA AGTGG TTATCCAGCGTCAGCCAGCGG CAAAAATGTGCTTGC TERM 4674 3504211 - 3504190 - H 80 -10.1 -3.85698 | GCCCCTTGTCAGAAA GGACAGGAC CGTC GTCCCGCCC ATCCGAAATACGCCC ppiC 3504360 - 3504641 + | peptidyl-prolyl cis-trans isomerase C TERM 4675 3504672 - 3504645 - T 89 -6.3 -5.28942 | gap 2 TATCGTAAATAAAAA GCCGGGT--GGCG GCTA CGCCTTACCCGAC CTACATCGTCTGCTT ilvC 3506208 - 3504733 - | ketol-acid reductoisomerase TERM 4676 3506160 - 3506182 + g 87 -13.4 -3.19175 | AGCGACATTTACCCA GCTGCGCCAG CTG CTGGCGCAGA TTCAGTGTATTAAAG TERM 4677 3506407 - 3506422 + G 86 -10.4 -4.07568 | opp_overlap 3506395 3506396 3506416 AAACCTTCCTGCATC TGGCGG AAAG CCGCCA TTTTGGCCGCAGCGC TERM 4678 3506481 - 3506513 + G 93 -13.4 -3.86897 | opp_overlap 3506479 CTTTCCCGACAGATT CAGCGGCTGGAAGA AGACC TCGGCCAGCCGCTG TTTGTGCGCGATAAC TERM 4679 3507225 - 3507209 - g 100 -9.4 -5.40072 | opp_overlap 3507209 3507199 CTGCGCGCAAAAAAA GCGGCT GCATG AGCCGC TAATTGATGCGTTCT ilvY 3506373 - 3507260 + | DNA-binding transcriptional regulator IlvY STY3650 3507604 - 3507263 - | hypothetical protein STY3651 3507963 - 3507601 - | hypothetical protein TERM 4680 3507974 - 3507991 + r 72 -5.7 -4.40963 | AACATAACATCTTTG TGTATAA AATT TTATACA TTGTTTTTAGCAGGT TERM 4681 3508228 - 3508217 - R 71 -7.2 -4.06687 | opp_overlap 3508217 3508216 ACCCGCCAGAAAGAA CCGG AACG CCGG GTTATTGCTCTCATC ilvA 3509743 - 3508199 - | threonine dehydratase TERM 4682 3509484 - 3509509 + g 84 -3.1 -5.30348 | opp_overlap 3509500, overlap 3509497 TGTGCATGGTTCCCC GCCGACGCGGT AATC ACGCCGTGGGC TTTTTGTTCTTCGGT ilvD 3511596 - 3509746 - | dihydroxy-acid dehydratase TERM 4683 3510071 - 3510053 - G 82 -11 -3.86346 | GTACCGCCGGAGAAA CGCCCATC GGT GATGAGCG CGCAGGCTTTGCCCA ilvE 3512682 - 3511753 - | branched-chain amino acid aminotransferase TERM 4684 3512693 - 3512710 + r 72 -5.5 -4.3767 | overlap 3512695 GTCATTTTTCTTCCT TTTGCGC TCAG GCGCGGA TTTGTTGTGATGTGG ilvM 3512960 - 3512700 - | acetolactate synthase 2 regulatory subunit ilvG 3514606 - 3512960 - | acetolactate synthase 2 catalytic subunit TERM 4685 3514445 - 3514411 - G 71 -7.8 -4.03413 | overlap 3514413 3514414 3514440 3514444 AGGTGGCGATACAAA CACCGGTTTTGCCGGT AGA ACGGGCATAACCGATT GCCGCCATTGCGGCA TERM 4686 3514443 - 3514413 - G 74 -10.4 -3.61232 | overlap 3514411 3514414 3514440 GTGGCGATACAAACA CCGGTTTTGCCGGT AGA ACGGGCATAACCGA TTGCCGCCATTGCGG TERM 4687 3514442 - 3514414 - G 72 -11.7 -2.76418 | overlap 3514413 3514411 3514440 TGGCGATACAAACAC CGGTTTTGCCGGT AGA ACGGGCATAACCG ATTGCCGCCATTGCG TERM 4688 3514696 - 3514723 + r 79 -11.2 -3.45366 | opp_overlap 3514698, overlap 3514698 3514721 TTTCAGGCCAAAAAA AACCCCCGGACC TTTC GGTGCGGGGGTC TTAGTTCGTTAAGGC TERM 4689 3514721 - 3514698 - R 100 -13.8 -5.78622 | opp_overlap 3514696 3514698 TCAGGCCAAAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TCTTAGTTCGTTAAG TERM 4690 3514698 - 3514721 + r 86 -13.8 -3.29727 | opp_overlap 3514698, overlap 3514696 TCAGGCCAAAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TCTTAGTTCGTTAAG ilvL 3514844 - 3514746 - | ilvG operon leader peptide TERM 4691 3514954 - 3514965 + r 77 -3.6 -5.13354 | ATAATGCAGGTGAAT GCCT AAAA GGGC TTTGTTTTTTATAAG TERM 4692 3515407 - 3515392 - R 73 -4 -4.79949 | CGGCTAAAAAAATAA CCATTT ATGT AAACGG GTTAATGAAAACAAC TERM 4693 3515450 - 3515499 + r 71 -7.9 -3.87869 | gap 1, overlap 3515451 AAACAATAAGTTAGG TTGGTGGTCAGTGGTGGTTATTAC GGG GTAATGCCAACCGCTG-CCGCCAC TTTGTCGCCACTTGG TERM 4694 3515451 - 3515498 + r 74 -11.4 -2.924 | gap 1, overlap 3515450 AACAATAAGTTAGGT TGGTGGTCAGTGGTGGTTATTAC GGG GTAATGCCAACCGCTG-CCGCCA CTTTGTCGCCACTTG STY3658 3516522 - 3515470 - | bacteriophage integrase TERM 4695 3516174 - 3516186 + g 76 -9.1 -4.07124 | CGCTGAAGTAGATCT CGCCT GTC AGGCG TTTATCTCGATAGTG TERM 4696 3516547 - 3516529 - R 91 -7.4 -5.252 | opp_overlap 3516529 3516536 3516538 TACTGCCATAAAAAA TGCCCTCC AGT AGAGAGCA TTTTTACTGTATGTA TERM 4697 3516529 - 3516547 + r 73 -4.5 -4.86133 | opp_overlap 3516529, overlap 3516536 3516538 TACTGCCATAAAAAA TGCCCTC CAGTA GAGAGCA TTTTTACTGTATGTA STY3659 3516838 - 3516686 - | hypothetical protein cI 3517487 - 3516918 - | repressor protein TERM 4698 3517488 - 3517504 + H 72 -5.1 -4.66938 | overlap 3517490 TTTCTCCAAATTCAT GGTCACT CCA AGTGAAC TTTTATCTTGACGAT STY3661 3517613 - 3517834 + | hypothetical protein TERM 4699 3518008 - 3517992 - g 70 -8.7 -3.61715 | opp_overlap 3517991 GATTCTGCGGAACAA GCTGAAC CCA GCTCAGC CTCATCTATTAACCG cII 3517867 - 3518376 + | regulatory protein cII STY3663 3518551 - 3518775 + | hypothetical protein STY3664 3518798 - 3519139 + | hypothetical protein STY3665 3519207 - 3519440 + | hypothetical protein STY3666 3519440 - 3519667 + | hypothetical protein TERM 4700 3519738 - 3519764 + G 80 -12.2 -3.31537 | ACATCTTCCTGCTGG CCCGCGACTGGT TGA ACCTTTCGCGGG TTCCTGTGCTGTGAT STY3667 3519664 - 3520521 + | DNA adenine methylase TERM 4701 3520569 - 3520541 - g 86 -12.4 -3.7732 | opp_overlap 3520540 3520539 TGCTGATATGAACAA CTGCAGCGGCTT TAACG AGGCCGCCGCAG CATTCTCATGGAACA TERM 4702 3521630 - 3521643 + G 73 -5.9 -4.37886 | opp_overlap 3521627 3521626, overlap 3521627 3521626 TATCGCGGAAATGCG CGGTG ACTG CGCCG TTTTCTACACCATCA STY3668 3520518 - 3522932 + | endonuclease STY3669 3523084 - 3523272 + | hypothetical protein TERM 4703 3523323 - 3523309 - T 79 -8.5 -4.29845 | opp_overlap 3523309 TAAGGGAACCGAAAA GGGGC ATTAA GCCCC TTTCTCATAAGTTGA TERM 4704 3523309 - 3523323 + T 74 -8.5 -3.99405 | opp_overlap 3523309 TAAGGGAACCGAAAA GGGGC ATTAA GCCCC TTTCTCATAAGTTGA STY3670 3523639 - 3523340 - | lipoprotein STY3671 3524554 - 3523748 - | lipoprotein TERM 4705 3524146 - 3524157 + g 76 -3 -5.00884 | GGGAACGTTCGACCT TGAA GGCT TTCA TTTTTTCCGCAGCCT TERM 4706 3524606 - 3524579 - H 91 -6.4 -5.47399 | gap 1, opp_overlap 3524588, overlap 3524582 3524583 CCAATCGTAAAAAAA CAAGGCTAATCCT AAC AGGATTAGC-TGG CATGACAAACTCATA TERM 4707 3524604 - 3524582 - H 93 -9.2 -4.80853 | opp_overlap 3524588, overlap 3524579 3524583 ATCGTAAAAAAACAA GGCTAATCCT AAC AGGATTAGCT GGCATGACAAACTCA TERM 4708 3524603 - 3524583 - H 85 -12.7 -3.46885 | opp_overlap 3524588, overlap 3524582 3524579 TCGTAAAAAAACAAG GCTAATCCT AAC AGGATTAGC TGGCATGACAAACTC TERM 4709 3525924 - 3525912 - g 71 -4.8 -4.63218 | opp_overlap 3525912, overlap 3525913 3525914 TGTTTTGTAAGAAAA GCTC GCTCT GAGC TATTCAAAGCAAAAA STY3672 3525240 - 3526154 + | hypothetical protein STY3673 3526151 - 3526891 + | hypothetical protein TERM 4710 3526925 - 3526893 - T 95 -13 -3.76968 | gap 1, opp_overlap 3526897 3526902, overlap 3526897 3526902 AACCTATTGAGTAAA TGAAGAAAAGCCACC AAAC GGTGGCTTTTCTT-A TTATGGGACTATATC TERM 4711 3526922 - 3526897 - T 100 -16.3 -3.57418 | opp_overlap 3526897 3526902, overlap 3526893 3526902 TATTGAGTAAATGAA GAAAAGCCACC AAAC GGTGGCTTTTC TTATTATGGGACTAT TERM 4712 3526897 - 3526922 + T 100 -16.3 -3.80174 | opp_overlap 3526897 3526893 3526902, overlap 3526902 TATTGAGTAAATGAA GAAAAGCCACC AAAC GGTGGCTTTTC TTATTATGGGACTAT TERM 4713 3526917 - 3526902 - T 100 -10.4 -4.85545 | opp_overlap 3526897 3526902, overlap 3526897 3526893 AGTAAATGAAGAAAA GCCACC AAAC GGTGGC TTTTCTTATTATGGG TERM 4714 3526902 - 3526917 + T 100 -10.4 -4.95547 | opp_overlap 3526902 3526897 3526893, overlap 3526897 AGTAAATGAAGAAAA GCCACC AAAC GGTGGC TTTTCTTATTATGGG STY3674 3527963 - 3526926 - | capsid portal protein TERM 4715 3527933 - 3527943 + g 95 -8.2 -5.11112 | GGATCTGATTCATCG CCGC TGC GCGG TTTTTCTTACGCTTT STY3675 3529729 - 3527963 - | terminase, ATPase subunit TERM 4716 3528457 - 3528470 + g 70 -9.5 -3.38966 | CCACCACCACGCATC CGGCG CTGT CGCCG TTCTGCGTACCTTTT TERM 4717 3529236 - 3529214 - G 71 -4.7 -4.55128 | opp_overlap 3529219, overlap 3529215 ACGGGCAAAGTAAAA GGTCGCGCC GATCT GGCGTGACT TCAGCAGGTTGCGGA STY3676 3529872 - 3530705 + | putative capsid scaffolding protein TERM 4718 3531516 - 3531490 - g 78 -5.8 -4.80396 | overlap 3531480 GAAAACAGTGAAAAA CTGGCTGCCGAT ATG ATCATCAGTCAG AAACGCATGGGTGGC STY3677 3530722 - 3531780 + | major capsid protein STY3678 3531784 - 3532434 + | terminase, endonuclease subunit TERM 4719 3532464 - 3532440 - f 93 -13.6 -3.48593 | gap 1 CAGCCGCTGACAGAA CGTGCC-CCCG CGCA CGGGCGGCACG GGGTGGCGAAAGGCA STY3679 3532467 - 3532994 + | putative capsid completion protein STY3680 3532994 - 3533197 + | phage tail protein nucE 3533201 - 3533416 + | secretory protein nucD 3533436 - 3533909 + | putative lysozyme STY3683 3533911 - 3534288 + | hypothetical protein TERM 4720 3534418 - 3534406 - g 84 -9.1 -4.3467 | AGCTGCAGAGCAAAA GCCAG GCA CTGGC AAAGAGCAACAGCCA STY3684 3534285 - 3534713 + | putative regulatory protein STY3685 3534809 - 3535240 + | putative phage tail protein STY3686 3535233 - 3535679 + | putative phage tail protein STY3687 3535748 - 3536326 + | putative phage baseplate assembly protein STY3688 3536323 - 3536682 + | phage baseplate assembly protein TERM 4721 3537295 - 3537242 - g 73 -5.1 -4.57073 | opp_overlap 3537267, overlap 3537260 GACGTGGTGGAAAAA GCTCTGAACAGTGAGAACGTCCGCC CGGT GGCTGACCGTCTTACGGTTCGCAGC GCAGAAATCATCCCG TERM 4722 3537317 - 3537327 + G 70 -6.8 -4.14422 | opp_overlap 3537306 3537304 3537303 ATCATCCCGTACCGG GTGG AAG CCAC TATTTTTCTCTATCC STY3689 3536669 - 3537577 + | phage baseplate assembly protein TERM 4723 3537819 - 3537848 + G 76 -5.6 -4.73388 | opp_overlap 3537811 AAAGGGACCACCAGT GCCGTGCGGC GGGTGGTGGA GCCGTTCGGC TTTTTGATCCACATT STY3690 3537570 - 3538175 + | putative phage tail protein STY3691 3538172 - 3539686 + | variable tail fibre protein TERM 4724 3540243 - 3540192 - g 81 -13 -3.08187 | overlap 3540233 AAACACCCGACTTAA CGCTGTGCTGGATTATATTGACGC GGTA ACGGCAACAGATACCAGCACAGCG CCGGACGTCATCTGG STY3692 3539686 - 3540279 + | hypothetical protein STY3693 3540691 - 3540251 - | hypothetical protein TERM 4725 3540334 - 3540289 - G 81 -12.8 -3.06796 | gap 1, overlap 3540291 GCGTAGGCCATTCAA TATCTGG-CGCACCGGAAGTA TCGAC CAGTTCCAGTGCGTCCAGATA ATCCAGCCACAAATT TERM 4726 3540332 - 3540291 - G 72 -11 -3.09327 | gap 1, overlap 3540289 GTAGGCCATTCAATA TCTGG-CGCACCGGAAGTA TCGAC CAGTTCCAGTGCGTCCAGA TAATCCAGCCACAAA STY3694 3541062 - 3540694 - | hypothetical protein TERM 4727 3540810 - 3540798 - G 89 -9.1 -4.62471 | AATTTACAGACAAAA CCTGC GGA GCAGG AATCGACGGGTCTGA pin 3541120 - 3541686 + | DNA-invertase STY3696 3541829 - 3543001 + | major tail sheath protein STY3697 3543011 - 3543526 + | major tail tube protein STY3698 3543581 - 3543883 + | putative phage tail protein TERM 4728 3543896 - 3543916 + F 84 -8.3 -4.65895 | TGACGGTTGACGATC TGGTGGC AGATATC GCCACCA TTTTTCACTGGCCGC STY3699 3543898 - 3544017 + | hypothetical protein TERM 4729 3544037 - 3544024 - g 71 -8.1 -3.82824 | opp_overlap 3544024 GATGAGTGATAACAA CCTGC GTCT GCAGG TCATTCTTAATGCGG TERM 4730 3544084 - 3544110 + G 72 -11.7 -2.62396 | gap 1 CCCATTTCGATCTGC GCAGGCCAGTTC AAGA GAACTGGC-TGC TGCTGTCAAAAAATC TERM 4731 3544361 - 3544351 - g 85 -6.8 -4.88388 | overlap 3544352 AGAACGCCAGAAAAA GCTG CAG CAGC AGACGGCGCTTGTGC TERM 4732 3544654 - 3544644 - g 70 -3.2 -4.72272 | overlap 3544653 TGGCGGCAGTAAAAA GCTA TAC CAGC ATGGAAGATGCCATG STY3700 3544010 - 3547087 + | hypothetical protein STY3701 3547084 - 3547569 + | putative phage tail protein STY3702 3547566 - 3548666 + | putative regulator of late gene expression STY3703 3548757 - 3548975 + | putative positive regulator of late gene transcription TERM 4733 3550104 - 3550090 - f 76 -4.2 -5.0538 | CGCTACGGTAAAAAA GCGG GTCATCG CCGC CCATAAACGGCAGTA TERM 4734 3550405 - 3550393 - f 90 -6.9 -5.40072 | opp_overlap 3550381 3550387 3550393 GTTGGCGTAAAAAAA GGGCA TTA CGCCC TTTTTATTGTCTATG TERM 4735 3550393 - 3550405 + F 85 -6.2 -5.27206 | opp_overlap 3550393, overlap 3550381 3550387 GTTGGCGTAAAAAAA GGGC ATTAC GCCC TTTTTATTGTCTATG TERM 4736 3550444 - 3550426 - f 100 -16 -4.18197 | opp_overlap 3550416 ATTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA 3550557 - 3550970 + | transposase TERM 4737 3551094 - 3551118 + T 87 -9.9 -4.2704 | opp_overlap 3551097, overlap 3551096 3551097 ACAGGCGCATCAGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTAATCATCAG TERM 4738 3551096 - 3551116 + T 93 -12.5 -3.73445 | opp_overlap 3551097, overlap 3551094 3551097 AGGCGCATCAGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTAATCATC TERM 4739 3551115 - 3551097 - T 100 -16 -4.91109 | opp_overlap 3551096 3551094 3551097 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAATCAT TERM 4740 3551097 - 3551115 + T 93 -16 -2.83344 | opp_overlap 3551097, overlap 3551096 3551094 GGCGCATCAGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAATCAT yifE 3551461 - 3551123 - | hypothetical protein STY3708 3551580 - 3552416 + | transcriptional regulator HdfR TERM 4741 3552491 - 3552510 + F 87 -10.8 -4.06419 | opp_overlap 3552491 TCAGGCAAAAAAAAA TCCTTAGC AGAT GCTAAGGA TTATTTCTGGCAGGG TERM 4742 3552510 - 3552491 - f 100 -10.8 -6.11644 | opp_overlap 3552491 TCAGGCAAAAAAAAA TCCTTAGC AGAT GCTAAGGA TTATTTCTGGCAGGG TERM 4743 3555409 - 3555427 + F 70 -8.8 -3.35798 | overlap 3555412 TTCACCACTGGCTTA GTGGTGGG GCT CCCACTGC TTGTACGTACACGGT TERM 4744 3555461 - 3555473 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4745 3556015 - 3556039 + F 71 -8 -3.93061 | gap 1, opp_overlap 3556013 3556021, overlap 3556017 3556018 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 4746 3556114 - 3556079 - f 77 -9.2 -4.00532 | opp_overlap 3556090 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA CTGATGGCAACGCCT TERM 4747 3557775 - 3557763 - f 76 -9.1 -3.73224 | opp_overlap 3557763 CCACTCGTCAGCAAA GCAGC CAA GCTGC TTCCTGTTACCGTTC TERM 4748 3557763 - 3557775 + F 70 -9.1 -3.37959 | opp_overlap 3557763 CCACTCGTCAGCAAA GCAGC CAA GCTGC TTCCTGTTACCGTTC TERM 4749 3558034 - 3558046 + F 71 -7.7 -4.00532 | overlap 3558022 CACCGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4750 3558066 - 3558080 + F 76 -4.2 -5.0916 | opp_overlap 3558066, overlap 3558055 3558067 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTCTCTTCAACC TERM 4751 3558362 - 3558344 - f 73 -2.4 -5.20783 | opp_overlap 3558352, overlap 3558346 ATTTAAAGAGAAAAA TTCGCG AGCGTTG CGCAAA CGTTTTCGTTACAAT TERM 4752 3558449 - 3558406 - f 100 -17 -3.31799 | opp_overlap 3558396 3558407 3558409, overlap 3558397 3558396 3558407 3558409 GAGAATGCCCCATAA GGAGCGTTAGCTGAGTTTTT CACG AAAAATTCAGCTAACGCTCT CTATAATCGTCAAAT TERM 4753 3558407 - 3558448 + F 100 -22.7 -2.96216 | opp_overlap 3558397 3558396 3558406 3558407 3558409, overlap 3558396 3558409 AGAATGCCCCATAAG GAGCGTTAGCTGAGTTTTT CACG AAAAATTCAGCTAACGCTC TCTATAATCGTCAAA TERM 4754 3558448 - 3558407 - f 100 -20.5 -2.58758 | opp_overlap 3558396 3558407 3558409, overlap 3558397 3558396 3558406 3558409 AGAATGCCCCATAAG GAGCGTTAGCTGAGTTTTT CACG AAAAATTCAGCTAACGCTC TCTATAATCGTCAAA TERM 4755 3558409 - 3558446 + F 100 -19.5 -3.03443 | opp_overlap 3558397 3558396 3558407 3558406 3558409, overlap 3558396 3558407 AATGCCCCATAAGGA GCGTTAGCTGAGTTTTT CACG AAAAATTCAGCTAACGC TCTCTATAATCGTCA TERM 4756 3558446 - 3558409 - f 100 -17.3 -2.83119 | opp_overlap 3558396 3558409 3558407, overlap 3558397 3558396 3558407 3558406 AATGCCCCATAAGGA GCGTTAGCTGAGTTTTT CACG AAAAATTCAGCTAACGC TCTCTATAATCGTCA purH 3558479 - 3560068 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 4757 3560565 - 3560543 - g 81 -12 -3.53012 | overlap 3560544 CTGGCTGCGGGCAAA GGCGTCATCG TGG CGATGACGCT GGAAGAAGCCGAAGC TERM 4758 3560564 - 3560544 - g 86 -15.5 -2.71712 | overlap 3560543 TGGCTGCGGGCAAAG GCGTCATCG TGG CGATGACGC TGGAAGAAGCCGAAG purD 3560084 - 3561373 + | phosphoribosylamine--glycine ligase hydG 3562695 - 3561370 - | transcriptional regulatory protein ZraR TERM 4759 3561419 - 3561446 + g 100 -9.7 -5.00616 | opp_overlap 3561419 GTAATGCCCAATTGA CGGGCGGCTTC CGTTTT GTTGCCGCCCG TTTTTTCCAGCGCCG hydH 3564098 - 3562701 - | sensor protein ZraS TERM 4760 3563473 - 3563439 - G 89 -3.4 -5.58454 | overlap 3563448 CTGATACCAAAAAAA CGCCAGTAACGTTGCC AAC AGCACCGCCGCTAACG CAGACAAAACAATCA TERM 4761 3564210 - 3564237 + H 80 -6.2 -4.79667 | opp_overlap 3564210 ACGGATGGGTAAAAA TGACTCGCCAGG CGGG TCATGCGAGTCA TTTTTACTCGCTTTT TERM 4762 3564228 - 3564210 - H 89 -8.8 -4.60041 | opp_overlap 3564210 ACGGATGGGTAAAAA TGACTCGC CAG GCGGGTCA TGCGAGTCATTTTTA zraP 3564352 - 3564807 + | zinc resistance protein TERM 4763 3564818 - 3564841 + T 100 -16.8 -3.08679 | opp_overlap 3564812, overlap 3564823 GGTAAAGCATGTTTG CCGAATGGCG GCTT CGCCATTCGG TATTCCATCAAAAGG yjaH 3565541 - 3564849 - | hypothetical protein TERM 4764 3565523 - 3565508 - G 93 -10.4 -4.45083 | opp_overlap 3565508 GCCAGACGGACAAAA GGGGCT GACA AGCCCC TTCGATAAAACTGTT hupA 3565825 - 3565553 - | transcriptional regulator HU subunit alpha TERM 4765 3565610 - 3565592 - G 89 -8.8 -4.59342 | opp_overlap 3565592 TTTACCAGAAACAAA CGCCGGTA CGT TAGCGGCG GCGATTTTGATTTCT yjaG 3566602 - 3566012 - | hypothetical protein nfi 3567315 - 3566644 - | endonuclease V TERM 4766 3566906 - 3566916 + g 74 -2.4 -5.00616 | opp_overlap 3566906 AGTGGTTCAAATTTA CCGC ATA GCCG TTTTTTCGCCACGCC hemE 3568389 - 3567325 - | uroporphyrinogen decarboxylase nudC 3569203 - 3568430 - | NADH pyrophosphatase rsD 3569296 - 3569784 + | anti-RNA polymerase sigma 70 factor thiC 3570148 - 3572043 + | thiamine biosynthesis protein ThiC thiE 3572043 - 3572678 + | thiamine-phosphate pyrophosphorylase TERM 4767 3573027 - 3572995 - g 71 -6.3 -4.28994 | CAGCAGCGACTAAAA GGCGATGCGCT-CCG GCATG CGGTAGCGCGT-GCC GACGTGGTGCTCGAC thiF 3572671 - 3573429 + | thiamine biosynthesis protein ThiF thiS 3573437 - 3573610 + | sulfur carrier protein ThiS thiG 3573612 - 3574382 + | thiazole synthase TERM 4768 3574700 - 3574672 - g 78 -11.7 -3.21099 | opp_overlap 3574668, overlap 3574642 CTTCTCTATGAGCAA CCGCATCAAGCGT AAG ACGCTGGATGAGG TGGATATTCAAAGGG thiH 3574379 - 3575512 + | thiamine biosynthesis protein ThiH TERM 4769 3575565 - 3575588 + T 100 -6.6 -5.86976 | opp_overlap 3575565 ACGTAATGTGAAAAA CGGGAGATTG TTAT CGGCCTCCCG TTTTTTATTTTGTCA TERM 4770 3576969 - 3576940 - T 80 -12.9 -2.53164 | opp_overlap 3576941, overlap 3576939 GTATCCAGCATGAAG CTGGTGGAGGGAT AAAT ACCCCTCCACCAT TTAACGATTACTCGT TERM 4771 3576941 - 3576968 + T 93 -14.2 -3.61764 | opp_overlap 3576940 3576939 TATCCAGCATGAAGC TGGTGGAGGGAT AAAT ACCCCTCCACCA TTTAACGATTACTCG rpoC 3581200 - 3576977 - | DNA-directed RNA polymerase subunit beta' TERM 4772 3579235 - 3579250 + g 78 -2.6 -5.24531 | gap 1, overlap 3579237 CTTCGGCTTCCGCTT CA-GAGA TGA TCTCGTG TTTTTTCTCCGGGAT TERM 4773 3579470 - 3579490 + g 77 -11.1 -3.5882 | opp_overlap 3579469 3579470 GATCATCCACAGAAT GGCGCGACC AAC GGTCGTGTC TTTCAGGCTGGTGTG TERM 4774 3581258 - 3581229 - R 90 -13.6 -3.4252 | opp_overlap 3581223 3581221, overlap 3581230 TCGGAGTTAGCACAA TCTGGTGTCGGG TTTTAC CCCGACACCAGT GACCTGTTTGAGCGA TERM 4775 3581257 - 3581230 - R 100 -17.1 -2.65298 | opp_overlap 3581223 3581221, overlap 3581229 CGGAGTTAGCACAAT CTGGTGTCGGG TTTTAC CCCGACACCAG TGACCTGTTTGAGCG rpoB 3585305 - 3581277 - | DNA-directed RNA polymerase subunit beta TERM 4776 3582263 - 3582279 + g 76 -2.9 -5.10033 | overlap 3582264 CGTCATACTGCTCAG CCAGTTG TTC CAGCTGA TTTTGTTTCTCTTCG TERM 4777 3585339 - 3585356 + r 71 -7.7 -3.86524 | GACAAGTCGACCCAT CTGTCCT GCGG GGGACAG TTTGTGCAACACTAT TERM 4778 3585583 - 3585558 - R 100 -17.7 -4.64766 | opp_overlap 3585551 3585547 3585546, overlap 3585578 CTTACAGCGCAAAAA GGCTGGTGACT AAAA AGTCACCAGCC ATCAGCCTGATTTCT rplL 3585988 - 3585623 - | 50S ribosomal protein L7/L12 TERM 4779 3586062 - 3586049 - R 74 -8.1 -3.89695 | opp_overlap 3586048 3586049 GCTTGATAAAGACAA CTGCG ATTA CGCAG CTTCTTTTGCATCGC rplJ 3586552 - 3586055 - | 50S ribosomal protein L10 rplA 3587672 - 3586968 - | 50S ribosomal protein L1 TERM 4780 3587129 - 3587169 + g 74 -3.1 -4.98255 | opp_overlap 3587137 CTTTCAGTTTGTCAG CGTCAAAGTCCACTTTACC GAT GGTGGTGTGGATGATGCCG TTTTTGTCGTTACGG rplK 3588104 - 3587676 - | 50S ribosomal protein L11 TERM 4781 3587780 - 3587803 + g 81 -8.2 -4.26681 | gap 1 CTTTGGTCTGCGCGA TTTCCTGCAGC TGA GC-GCGGGAAA TTTTACCTACTTTGT TERM 4782 3588222 - 3588194 - R 100 -11.8 -5.35224 | CCCATAAAAACAAAA GGCGCGAAATTG TATGT CAATTTTGCGCC CTATGCAACGATTAG TERM 4783 3588227 - 3588245 + r 91 -7.4 -5.14563 | opp_overlap 3588231 AATTTTGCGCCCTAT GCAACGAT TAG ATCGCTGC TTTTTTGATCGCAGC nusG 3588807 - 3588262 - | transcription antitermination protein NusG secE 3589192 - 3588809 - | preprotein translocase subunit SecE TERM 4784 3588900 - 3588886 - G 77 -11.4 -3.52896 | GGATCAGTGACATAA CTGCGG TAA CCGCAG CGACGATCAGCGTGG TERM 4785 3589387 - 3589370 - R 95 -11.3 -4.60924 | opp_overlap 3589370 GAAAGCGTGCAAAAA GGGCATC AAAT GATGCCC TTTTATTGCGCATTG TERM 4786 3589370 - 3589387 + r 95 -11.3 -4.65747 | opp_overlap 3589370 GAAAGCGTGCAAAAA GGGCATC AAAT GATGCCC TTTTATTGCGCATTG tuf 3590606 - 3589422 - | elongation factor Tu TERM 4787 3590923 - 3590935 + H 73 -7.7 -4.15222 | opp_overlap 3590919 TCTGCACTGAATATC GAGAG AAA CTCTC TTTATTCGAGCCGGT STY3739a 3591183 - 3591356 + | hypothetical protein TERM 4788 3592009 - 3591999 - g 78 -2.4 -5.1963 | GTTAATGAAGAAAAA GGGG TTC CCCG AATCGTATGATATGC TERM 4789 3592385 - 3592372 - g 70 -6.7 -4.10744 | opp_overlap 3592368 3592372, overlap 3592369 TTATCTAAAGAAGAA GCTGT TAAT ACAGC AGCTTCGCTTTGGAA coaA 3591565 - 3592515 + | pantothenate kinase TERM 4790 3592552 - 3592516 - T 95 -12.6 -3.91984 | gap 1, opp_overlap 3592518 3592525, overlap 3592525 AGATTGCGGAAATAA CAG-AAAAAAGGGGAGT ACCG ACTCCCCTTTTTTACTA TTCGGCGCTTCGCAG TERM 4791 3592518 - 3592550 + T 82 -13 -3.04322 | gap 1, opp_overlap 3592516 3592525, overlap 3592525 ATTGCGGAAATAACA G-AAAAAAGGGGAGT ACCG ACTCCCCTTTTTTAC TATTCGGCGCTTCGC TERM 4792 3592542 - 3592525 - T 100 -11.3 -5.57729 | opp_overlap 3592518 3592525, overlap 3592516 AAATAACAGAAAAAA GGGGAGT ACCG ACTCCCC TTTTTTACTATTCGG TERM 4793 3592525 - 3592542 + T 100 -11.3 -5.27779 | opp_overlap 3592525 3592516, overlap 3592518 AAATAACAGAAAAAA GGGGAGT ACCG ACTCCCC TTTTTTACTATTCGG birA 3593512 - 3592550 - | biotin--protein ligase murB 3594537 - 3593509 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 4794 3594664 - 3594708 + r 79 -11.4 -3.30243 | gap 1, opp_overlap 3594663 3594664, overlap 3594689 3594691 CGTAGGCCGGATAAG GCGGAGCCGCCATCCGGCGGT GCAG GTTGCCTGATGGCG-CTGCGC TTATCAGGCCTACAT TERM 4795 3594770 - 3594751 - R 100 -13.6 -5.14477 | opp_overlap 3594751 CACACATGCAAAAAA GCCCATCC GTCA GGATGGGC TTCTTCACTAATTTG TERM 4796 3594751 - 3594770 + r 100 -13.6 -3.71924 | opp_overlap 3594751 CACACATGCAAAAAA GCCCATCC GTCA GGATGGGC TTCTTCACTAATTTG TERM 4797 3597464 - 3597482 + r 70 -8.8 -3.35798 | overlap 3597467 TTCACCACTGGCTTA GTGGTGGG GCT CCCACTGC TTGTACGTACACGGT TERM 4798 3597516 - 3597528 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4799 3598070 - 3598094 + r 71 -8 -3.93061 | gap 1, opp_overlap 3598068 3598076, overlap 3598072 3598073 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 4800 3598133 - 3598170 + r 77 -3.4 -5.14563 | opp_overlap 3598129 3598135, overlap 3598135 ATTTTTAAAGAGCAA AACTTCGCAGTGAACC CTTTCA GGTACACTCTGAAGTA TTTTTTCGTAAACAC TERM 4801 3600267 - 3600283 + r 76 -5.1 -4.75954 | TATATTACGCTTTCC CGCTTCA GAG TCAAGCG TTTATTTTCGCTTTT murI 3601302 - 3600451 - | glutamate racemase TERM 4802 3601191 - 3601159 - GR 73 -10.5 -3.09349 | opp_overlap 3601166 GAAAGCATATATATA GTGGAGATCCGGCAG GAG CCGCCGAATCTCATC ATAGACCGACAATCC TERM 4803 3601238 - 3601205 - GR 71 -10.3 -2.64354 | gap 1, overlap 3601204 TCATAGACCGACAAT CCACCGACGCCGGAAT CAA ATACCAGCA-CGGTGG GACGTGGTTCAGAAG btuB 3603091 - 3601247 - | vitamin B12/cobalamin outer membrane transporter TERM 4804 3602980 - 3602968 - GH 74 -10.5 -3.29461 | TAACGGGCGCCAGAA CCGCG CTG CGCGG CTGCTGAAAACGGTT TERM 4805 3604118 - 3604132 + G 85 -4.2 -5.27938 | TCTGCTTGAGTTGTA TTGCGG CAA CGGCAA TTTTTCTTTAGCGCT trmA 3603465 - 3604565 + | tRNA (uracil-5-)-methyltransferase TERM 4806 3604607 - 3604568 - T 76 -7.8 -4.2803 | gap 1, opp_overlap 3604574, overlap 3604569 3604572 CACCGCAAGGTAAAA TGTACGTCGGATGGCCGGT TAT ACCG-CCATCCGGCATTCG CACACTACTCCGCGG TERM 4807 3604606 - 3604569 - T 77 -11.3 -3.16336 | gap 1, opp_overlap 3604574, overlap 3604568 3604572 ACCGCAAGGTAAAAT GTACGTCGGATGGCCGGT TAT ACCG-CCATCCGGCATTC GCACACTACTCCGCG TERM 4808 3604603 - 3604572 - T 77 -11.6 -2.77861 | gap 1, opp_overlap 3604574, overlap 3604569 3604568 GCAAGGTAAAATGTA CGTCGGATGGCCGGT TAT ACCG-CCATCCGGCA TTCGCACACTACTCC yijD 3604971 - 3604612 - | hypothetical protein yijC 3605622 - 3604987 - | DNA-binding transcriptional repressor FabR TERM 4809 3606161 - 3606173 + G 71 -4.7 -4.63218 | overlap 3606162 ACTGTGAAATCTTGC AGGGC AAC GCCCA TTTTATTGACGAACA udhA 3605821 - 3607221 + | soluble pyridine nucleotide transhydrogenase oxyR 3608121 - 3607204 - | DNA-binding transcriptional regulator OxyR TERM 4810 3608310 - 3608326 + r 100 -13.7 -5.81412 | CCAACGTGAACTTTT GCGGACC TCT GGTCCGC TTTTTTTTGCGTAAA TERM 4811 3608372 - 3608345 - R 91 -8.2 -5.00616 | opp_overlap 3608364 TTTTTGCGTAAAAAA GCCCGGCGTCGC TGAT GCTCGGCCGGGC AGTATTACCTGATGG argH 3609781 - 3608405 - | argininosuccinate lyase TERM 4812 3609458 - 3609476 + g 87 -8.1 -4.57569 | CACCTGATCGTTACG GCTGCGC CCGGT GTGCAGC TTTTTACCCAACTGA argB 3610672 - 3609899 - | acetylglutamate kinase TERM 4813 3610312 - 3610343 + g 70 -8.7 -3.63627 | GTTGCGCCAGCCCGA CGTGGCCTAACGC TTCATC GAGTTGGGTCACG TTTACGCTGTCGCCA TERM 4814 3610462 - 3610489 + g 75 -4 -4.89063 | gap 1, opp_overlap 3610453, overlap 3610465 TAATGATGCCAATCT GATCGGCAGGCGT CAC GCGCAGGCCG-TC TTTCTTTTTCACTGG argC 3611687 - 3610683 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 4815 3612745 - 3612733 - g 74 -2.7 -4.94902 | overlap 3612734 GAAGTAGTAGAAAAA CTGTT GGG AACAA AAACCGACGTGGTGA argE 3611776 - 3612927 + | acetylornithine deacetylase TERM 4816 3613113 - 3613131 + F 71 -7.4 -3.85698 | opp_overlap 3613112 TTCGCAGTAATTGAC GCCACG GGTTTTA CGTGGC TTTATAAAAGACGGC TERM 4817 3613396 - 3613360 - g 73 -8.8 -3.85817 | opp_overlap 3613367 3613370, overlap 3613363 AGGTGCTGGGAGAAA CCATCAAGGATGCGCT GGGAG AGCACATTCTTGATCG CGTAGAAACAATCCG TERM 4818 3613589 - 3613578 - g 74 -7.2 -4.08945 | overlap 3613567 3613562 3613564 AGCATTTCGCCAAAA GGCG AAGC CGCC AGCAACCCGGAAGTG TERM 4819 3614574 - 3614554 - g 82 -11.1 -3.78775 | opp_overlap 3614550, overlap 3614573 TTGGCGACTACGAAA GCTGGTCGG AAG CCGACAAGC AGGCCTTCCTGATCC TERM 4820 3614956 - 3614934 - g 70 -7 -4.09685 | gap 1 TCCGACTCGGCAAAA GACGCCGGC GTTATG GCC-GCGTC ATGGGCGCAGTATCA ppc 3613296 - 3615947 + | phosphoenolpyruvate carboxylase TERM 4821 3615989 - 3615960 - f 100 -12.1 -4.68655 | opp_overlap 3615985 TAACGCCAAAAGAAA GCCGCCCTCAC GCAGTTAT GTGGGGGCGGC ATGAAATACTGCTGT TERM 4822 3616315 - 3616328 + G 78 -2.3 -5.27335 | TGTACAGCTCACTAT GGCTG ATCC CGGTC TTTTTGTTTCCAGGC yijP 3616149 - 3617882 + | hypothetical protein TERM 4823 3617963 - 3617951 - f 77 -10.5 -3.30124 | opp_overlap 3617939 3617938, overlap 3617960 CCGTAGTCCGGATAA GGCGC AAA GCGCC GCTATCCGGCAATAA yijO 3618043 - 3618879 + | AraC family transcriptional regulator TERM 4824 3619287 - 3619277 - g 77 -8.2 -4.09685 | opp_overlap 3619278, overlap 3619278 GCCCAGGCTGCAAAA CGCC ATC GGCG AAGAAGGCACTTTAT talC 3619134 - 3619796 + | fructose-6-phosphate aldolase TERM 4825 3620466 - 3620456 - g 81 -6.8 -4.70626 | overlap 3620460 GAAGAAGGCGAAAAA GCCA TGT TGGC CGCCGAACAGCACGT gldA 3619808 - 3620911 + | glycerol dehydrogenase TERM 4826 3620932 - 3620951 + T 100 -10.7 -5.41143 | opp_overlap 3620932 GCTTGCAATGAAAAA TCCCCGC AATTGC GCGGGGA TTTTTTTGCCCGGTG TERM 4827 3620951 - 3620932 - T 100 -11.4 -4.8622 | opp_overlap 3620932 GCTTGCAATGAAAAA TCCCCGCA ATTG CGCGGGGA TTTTTTTGCCCGGTG katG 3623198 - 3621018 - | catalase (hydroperoxidase I) TERM 4828 3622543 - 3622556 + g 83 -9.5 -4.08692 | opp_overlap 3622529 AGGCCCATCTCGGTC GCGCC CAGC GGCGC TTTTGCCAGCGCTTC TERM 4829 3622927 - 3622906 - G 70 -3 -4.71791 | gap 1 ATACGAATAAACAAA CCGACATAG CTGCC CCA-GTCGG CGGGCCACCACGGTT TERM 4830 3623356 - 3623341 - R 87 -10.4 -4.1711 | opp_overlap 3623342 ATGAGTTGTAATAAA GCTCCC GGCA GGGAGC TGGAGGTTATAAACC metF 3624253 - 3623363 - | 5,10-methylenetetrahydrofolate reductase TERM 4831 3625900 - 3625862 - gR 79 -11 -3.34398 | gap 1, opp_overlap 3625874, overlap 3625860 3625863 GGGCCGGGTTAAACA TCGCCGGGATGCGCCAG TTCTGG CTGACGCACCCCG-CGC CCACGGGCTGGCTGT TERM 4832 3625899 - 3625863 - gR 86 -14.5 -2.60496 | gap 1, opp_overlap 3625874, overlap 3625862 3625860 GGCCGGGTTAAACAT CGCCGGGATGCGCCAG TTCTGG CTGACGCACCCCG-CG CCCACGGGCTGGCTG STY3763 3627064 - 3625958 - | alanine racemase STY3762 3624532 - 3626013 + | GntR family regulatory protein TERM 4833 3626617 - 3626602 - GT 75 -6 -4.57073 | opp_overlap 3626572, overlap 3626603 CACGCTGGCGAAAAA TCGCGG CCAG CCGCGC CAGTTGCTCCGGCGT TERM 4834 3626616 - 3626603 - GT 73 -9.5 -3.33922 | opp_overlap 3626572, overlap 3626602 ACGCTGGCGAAAAAT CGCGG CCAG CCGCG CCAGTTGCTCCGGCG TERM 4835 3626792 - 3626771 - GT 73 -5.1 -4.63218 | gap 1 TTGCGCGCAACAAAA CGGCATCGCC TGC GGC-ATGACG CCATTAAGCAACACC TERM 4836 3626960 - 3626985 + gT 71 -7.4 -3.86944 | TACTGCGCCGCATTG CGCGGGGGCG ACATGG CGCGCCAGCG TTTGATAATTGTCAA STY3764 3628320 - 3627061 - | putative serine hydroxymethyltransferase TERM 4837 3627483 - 3627510 + g 71 -9.8 -3.53811 | opp_overlap 3627482 3627479 3627478 AACGTTTAAATTCAG GCTGTAGCGCTT CGCC AAGCGCCACCGC TTTAGCCGCGATAAC TERM 4838 3627553 - 3627535 - G 71 -10.2 -3.17219 | GATAACGTGCATCAA CGGCCCGC CCT GCAAGCCG GGAAAGATGGCGCTG TERM 4839 3628083 - 3628058 - G 76 -10.3 -3.67611 | opp_overlap 3628057 3628056, overlap 3628071 TGCACGTTAACATAA CGCGCGCCGAA AAGT TGCTGCGCGCG GGTTATCGCCAGCAT TERM 4840 3628446 - 3628419 - R 79 -12 -3.13522 | gap 1, overlap 3628417 ATTTCGGCAGGAACA TGCCGGG-AACGC GGC GCGTAACCCGGCA AAATTACAGAAGCTA TERM 4841 3628527 - 3628496 - R 74 -10.9 -2.77899 | overlap 3628493 GCGGTCCACGAATGA TCCAGGCCAGACA TACCGC CGTCCGGCCTGAA TGCGCTAAAGGCCAT STY3765 3630120 - 3628564 - | hypothetical protein TERM 4842 3629073 - 3629058 - G 87 -8.2 -4.56597 | overlap 3629061 TCCCCGCCGTAAAAA GCAGCG CATC CGCCGC CAGATTCCCCAGCGA TERM 4843 3629145 - 3629161 + g 77 -3.6 -5.06414 | GCGCCACCGTTTGCT GCACGA CTTTA TCGAGC TTTTTGTTCCAGCCG TERM 4844 3631243 - 3631257 + G 77 -8.5 -4.2123 | GTCGCCGTTAATCTG GCGGC CAGTC GCCGC TTTGTTACCTGGCTA STY3766 3630256 - 3631380 + | hypothetical protein TERM 4845 3632060 - 3632104 + T 93 -15.8 -3.06492 | gap 2, overlap 3632091 ACAGATACCCCGGTT TGCCCG-CTGCCGGAT-CTGGC GAA GCCGCTATCCGGCAGGCGGGCG TATTACAATAGCTGC metL 3634539 - 3632107 - | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 4846 3633496 - 3633513 + g 81 -8.3 -4.25074 | CACGCCCACCGCCAG CGGACGC GCCT GCGCCCG TTTTAAAATTTGGTC metB 3635702 - 3634542 - | cystathionine gamma-synthase metJ 3635967 - 3636284 + | transcriptional repressor protein MetJ TERM 4847 3636294 - 3636320 + F 83 -6.5 -5.07107 | opp_overlap 3636292 3636295, overlap 3636295 3636296 TACTGATAGCAAAGC ATGCGGTCAGA ACGCC TCTGGCCGCGC TTTTTTAACGATTTC TERM 4848 3636295 - 3636319 + F 75 -10 -3.6318 | opp_overlap 3636295 3636292, overlap 3636294 3636296 ACTGATAGCAAAGCA TGCGGTCAGA ACGCC TCTGGCCGCG CTTTTTTAACGATTT TERM 4849 3636296 - 3636318 + F 74 -11.3 -2.76823 | opp_overlap 3636295 3636292, overlap 3636295 3636294 CTGATAGCAAAGCAT GCGGTCAGA ACGCC TCTGGCCGC GCTTTTTTAACGATT TERM 4850 3636892 - 3636908 + F 79 -9.3 -4.19238 | AGGTATGGTCGATGT CGCCCCC TAC GGCGGCG TTTTCCCATTAACAG TERM 4851 3637620 - 3637603 - f 70 -2.1 -5.07652 | gap 1, overlap 3637607 3637615 TGTCGCAAAAGAAAA TTATCCAT TAA ATGG-TAA ATACACCATCAATAC TERM 4852 3638574 - 3638551 - f 100 -16.8 -4.71222 | opp_overlap 3638549 AGAGTAAAAGTAAAA CAGGCGGAAG CCAA CTTCCGCCTG AATGGTTAAAACGTA STY3773 3638730 - 3639392 + | hypothetical protein TERM 4853 3639426 - 3639397 - T 100 -12.3 -4.38712 | opp_overlap 3639405, overlap 3639381 3639405 GTTATCCCTAGAAAA CAAAAAAAGCGCC CTGC GGCGCTTTTTTTT CTGGCGGTAACTTAT TERM 4854 3639405 - 3639418 + T 100 -9.5 -5.93809 | opp_overlap 3639397 3639405 TAGAAAACAAAAAAA GCGCC CTGC GGCGC TTTTTTTTCTGGCGG TERM 4855 3639418 - 3639405 - T 100 -9.5 -6.14618 | opp_overlap 3639405, overlap 3639397 TAGAAAACAAAAAAA GCGCC CTGC GGCGC TTTTTTTTCTGGCGG rpmE 3639650 - 3639438 - | 50S ribosomal protein L31 TERM 4856 3639565 - 3639580 + g 71 -6.1 -4.28361 | AGGTTCAGGTCGTGA CCCAC GGTAGA GTGGG TTTTGATAACATTAC TERM 4857 3640747 - 3640735 - g 74 -4.7 -4.81249 | opp_overlap 3640735 3640735 GCTGAAAGCGAAAAA CGGCG AAG CGGCG ATTGTCATCGGCACG priA 3639854 - 3642052 + | primosome assembly protein PriA TERM 4858 3643091 - 3643105 + G 80 -9.2 -4.20696 | opp_overlap 3643090 3643091 CCCTCCGTTGACAAC CGTGGC GCA GCCGCG TTTTGACATTGGTCG cytR 3642207 - 3643232 + | DNA-binding transcriptional regulator CytR TERM 4859 3643819 - 3643789 - g 82 -11 -3.77607 | overlap 3643779 3643790 AACAACGCCAGCAAA CGCTACAGCGCCAG CGT CAGGCGCAGCAGCA GCAGCAGCAGCAGCA TERM 4860 3643818 - 3643790 - g 75 -12.3 -2.85841 | overlap 3643789 3643779 ACAACGCCAGCAAAC GCTACAGCGCCAG CGT CAGGCGCAGCAGC AGCAGCAGCAGCAGC TERM 4861 3644056 - 3644034 - g 70 -6.8 -4.11216 | overlap 3644017 GCGGCAGCGCCAAAA GCCGCGCCCA TTA CGCGCGCGCC TGAAGCGCCGAAGGC TERM 4862 3644256 - 3644246 - g 74 -3.2 -4.96468 | GAAAGGTAAAGAAAA TGCC GAC AGCA CCATTAACCGTCTGA ftsN 3643326 - 3644318 + | essential cell division protein hslV 3644410 - 3644940 + | ATP-dependent protease peptidase subunit TERM 4863 3645319 - 3645306 - g 80 -5.2 -4.87665 | GGCTATCGAGAAAAA CCGC TATCGT GCGG AAGAGTTGGCGGAAG TERM 4864 3645450 - 3645436 - g 74 -2.1 -5.00884 | gap 1 ACGTTCCGCAAAAAA CTGCGC GAAG GC-CAG CTCGACGATAAAGAG hslU 3644950 - 3646281 + | ATP-dependent protease ATP-binding subunit TERM 4865 3646312 - 3646329 + F 100 -11.3 -5.07486 | opp_overlap 3646324 TTTCATCACTGTTGA TGGGGCT GAAA AGCCCCA TTTTTATTGGCGCTA menA 3646348 - 3647277 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase menG 3647370 - 3647855 + | ribonuclease activity regulator protein RraA TERM 4866 3647857 - 3647886 + T 83 -13.7 -2.60808 | opp_overlap 3647864, overlap 3647864 TTGATATCGAGTGAT CAAAAAAGGCGCC GTAA GGCGCCTTTTTTA TGCGTTGTCGCTGAT TERM 4867 3647879 - 3647864 - T 100 -11.8 -5.1675 | opp_overlap 3647857 3647864 CGAGTGATCAAAAAA GGCGCC GTAA GGCGCC TTTTTTATGCGTTGT TERM 4868 3647864 - 3647879 + T 100 -11.8 -5.3236 | opp_overlap 3647864, overlap 3647857 CGAGTGATCAAAAAA GGCGCC GTAA GGCGCC TTTTTTATGCGTTGT yiiU 3648316 - 3648077 - | hypothetical protein TERM 4869 3648555 - 3648542 - H 70 -9.5 -3.04398 | opp_overlap 3648552, overlap 3648541 CTGCTGTCTCAAAAT GCGCC TCAT GGCGC GATAACGCTCATTTT glpF 3648715 - 3649560 + | glycerol uptake facilitator protein glpK 3649581 - 3651086 + | glycerol kinase TERM 4870 3651134 - 3651105 - f 79 -9.3 -4.09685 | opp_overlap 3651102 3651105, overlap 3651088 CGCCATCCGGCAAAA TCTTTGTGCGGAG GCAA CTCCGCACACACA TCAATTATTCCCTCC TERM 4871 3651305 - 3651287 - g 72 -3.7 -4.83169 | opp_overlap 3651297, overlap 3651289 ACGCGGCGATAAAAA TACCGCG GACGG CGCGGCG GTCAACGCCATGCGT TERM 4872 3651303 - 3651289 - g 74 -8.5 -4.03995 | opp_overlap 3651297, overlap 3651287 GCGGCGATAAAAATA CCGCG GACGG CGCGG CGGTCAACGCCATGC TERM 4873 3651946 - 3651932 - g 74 -4.9 -4.70169 | overlap 3651916 3651933 CGACAGCGAAGAAAA CCGCC GCATT GGCGA ACAGGAACTGGCGCG glpX 3651198 - 3652208 + | fructose 1,6-bisphosphatase II TERM 4874 3652229 - 3652250 + F 73 -10.9 -2.74122 | overlap 3652228 3652226 TTGTTAGTTAGAGCC TTCCAGCCT CGCG GGGCTGGAA ATCTTTCTCCTGACG fpr 3652305 - 3653051 + | ferredoxin-NADP reductase yiiR 3653586 - 3653158 - | hypothetical protein yiiQ 3653687 - 3654283 + | hypothetical protein tpiA 3654396 - 3655163 + | triosephosphate isomerase STY3790 3656019 - 3655255 - | ribulose-phosphate 3-epimerase STY3791 3656358 - 3656029 - | autoinducer-2 (AI-2) modifying protein LsrG yneB 3657277 - 3656402 - | aldolase STY3793 3658328 - 3657306 - | putative ABC transport protein, solute-binding component TERM 4875 3657856 - 3657878 + g 73 -9.2 -3.88291 | opp_overlap 3657858 3657862, overlap 3657858 3657862 GTTGGGCTGGAATAG AAGAAAGCGA CTT TCGCTTTCTC TTTGTCCACCTGATG TERM 4876 3657876 - 3657858 - G 83 -11.8 -3.65812 | opp_overlap 3657856 3657858 3657862, overlap 3657862 TGGGCTGGAATAGAA GAAAGCGA CTT TCGCTTTC TCTTTGTCCACCTGA TERM 4877 3657858 - 3657876 + g 81 -11.8 -3.52906 | opp_overlap 3657858 3657862, overlap 3657856 3657862 TGGGCTGGAATAGAA GAAAGCGA CTT TCGCTTTC TCTTTGTCCACCTGA TERM 4878 3657862 - 3657872 + g 75 -6.8 -4.40003 | opp_overlap 3657862 3657858, overlap 3657858 3657856 CTGGAATAGAAGAAA GCGA CTT TCGC TTTCTCTTTGTCCAC TERM 4879 3657872 - 3657862 - G 75 -6.8 -4.46073 | opp_overlap 3657858 3657856 3657862, overlap 3657858 CTGGAATAGAAGAAA GCGA CTT TCGC TTTCTCTTTGTCCAC ydeZ 3659358 - 3658357 - | putative ABC transporter, membrane component STY3795 3660398 - 3659355 - | putative ABC transporter permease protein STY3796 3661927 - 3660392 - | putative ABC transporter ATP-binding protein TERM 4880 3660587 - 3660557 - G 73 -6.2 -4.49958 | gap 1 ATCGGAGGAAATAAA CAGCACCGCGACA TTTTGT TG-CGCGATACTG CGCAACAGCTGATAA ydeW 3662183 - 3663142 + | putative regulatory protein TERM 4881 3663356 - 3663383 + G 76 -12.8 -2.7556 | gap 1, overlap 3663353 3663345 TCGGTCAAGCGGAAT GGCAGCATCTGGC CGT GCCGGATG-TGCC TGGTTCGATGGAGTT TERM 4882 3663432 - 3663414 - g 89 -8.9 -4.57569 | opp_overlap 3663403 3663414 TGATCTTGCCAAAAA CTGGCAA CTGGC TTGCCAG TGTATCCGTCAGGCA ydeV 3663229 - 3664821 + | autoinducer-2 (AI-2) kinase STY3799 3664919 - 3665116 + | hypothetical protein STY3802 3666412 - 3665690 - | GntR family regulatory protein TERM 4883 3666069 - 3666090 + g 81 -12.3 -3.55563 | gap 1 CCGTCTGCCTGAGCG TCGCGCGCGC GGC GCG-GCGCGA TTTCCAGAATACGGT STY3803 3667515 - 3666475 - | hypothetical protein STY3804 3668484 - 3667525 - | aminoimidazole riboside kinase TERM 4884 3668302 - 3668292 - G 78 -6.8 -4.59773 | overlap 3668294 CGTTATCCTGAAAAA CCTG GCG CAGG AAACGACCGGCGTCA STY3805 3668752 - 3668495 - | hypothetical protein STY3806 3669829 - 3668828 - | hypothetical protein TERM 4885 3669956 - 3670014 + r 78 -5.79999 -4.82901 | gap 3, opp_overlap 3669963 3669966 3669972, overlap 3669963 3669966 3669972 GCTATGAAGAGAGTG TA-ACG-AACC-ACCAAAAGATATAAAGG TATA CCTTTATATCTTTTGGTTGGTTTCACATA TTTTTATAGACACGA TERM 4886 3669963 - 3670005 + r 100 -18.9 -3.73294 | gap 1, opp_overlap 3669963 3669966 3669972, overlap 3669956 3669966 3669972 AGAGAGTGTAACGAA CC-ACCAAAAGATATAAAGG TATA CCTTTATATCTTTTGGTTGG TTTCACATATTTTTA TERM 4887 3670004 - 3669963 - R 100 -19.1 -3.37053 | opp_overlap 3669956 3669963 3669966 3669972, overlap 3669966 3669972 AGAGAGTGTAACGAA CCACCAAAAGATATAAAGG TATA CCTTTATATCTTTTGGTTG GTTTCACATATTTTT TERM 4888 3670001 - 3669966 - R 100 -19.4 -2.84574 | opp_overlap 3669963 3669956 3669966 3669972, overlap 3669963 3669972 GAGTGTAACGAACCA CCAAAAGATATAAAGG TATA CCTTTATATCTTTTGG TTGGTTTCACATATT TERM 4889 3669966 - 3670001 + r 100 -19.4 -3.54146 | opp_overlap 3669966 3669963 3669972, overlap 3669963 3669956 3669972 GAGTGTAACGAACCA CCAAAAGATATAAAGG TATA CCTTTATATCTTTTGG TTGGTTTCACATATT TERM 4890 3669995 - 3669972 - R 91 -11.2 -4.37013 | opp_overlap 3669972 3669966 3669963 3669956, overlap 3669966 3669963 AACGAACCACCAAAA GATATAAAGG TATA CCTTTATATC TTTTGGTTGGTTTCA TERM 4891 3669972 - 3669995 + r 95 -11.2 -4.5287 | opp_overlap 3669966 3669963 3669972, overlap 3669966 3669963 3669956 AACGAACCACCAAAA GATATAAAGG TATA CCTTTATATC TTTTGGTTGGTTTCA TERM 4892 3670058 - 3670030 - R 81 -13.3 -2.72799 | overlap 3670027 TTTTTATAGACACGA TCTTACCCCAGTT TTA AACCGGGATAAGA ATCAATAAGATAATG cdh 3670850 - 3670095 - | CDP-diacylglycerol pyrophosphatase TERM 4893 3670914 - 3670938 + r 95 -12.9 -3.88583 | opp_overlap 3670914 GTGGCAAAGAAAAAA CCCGGTAACAT AAT ACGTTACCGGG TTTATAAACGGTTTA TERM 4894 3670938 - 3670914 - R 100 -15.1 -5.63517 | opp_overlap 3670914 GTGGCAAAGAAAAAA CCCGGTAACAT AAT ACGTTACCGGG TTTATAAACGGTTTA sbp 3671940 - 3670951 - | sulfate transporter subunit TERM 4895 3671476 - 3671498 + g 74 -6.9 -4.24002 | opp_overlap 3671476 CCATGCCGCCAGATA GTTCCAGCG TGCGC CGCCGGAGC TTTTCGGGTTTGGCG pfkA 3673106 - 3672144 - | 6-phosphofructokinase fieF 3674187 - 3673291 - | ferrous iron efflux protein F TERM 4896 3674295 - 3674277 - R 100 -14.6 -6.02914 | TGGAGATAAAAAAAA CCCCCACA TCA TGTGGGGG AAGACAGGGATGGTG cpxP 3674835 - 3674335 - | periplasmic repressor CpxP TERM 4897 3674799 - 3674789 - G 76 -3.2 -5.00616 | GCGTGGCTTAAAAAA CTGA ATG CCAG CGTTGAGGCCATAAC cpxR 3674986 - 3675684 + | DNA-binding transcriptional regulator CpxR TERM 4898 3676598 - 3676583 - g 79 -3.2 -5.1485 | overlap 3676585 TAACCAACAGAAAAA TGCGCT GGTC AGCGAA ACGATGAAAGCCAAT cpxA 3675681 - 3677054 + | two-component sensor protein TERM 4899 3677085 - 3677058 - T 100 -9.8 -4.75776 | opp_overlap 3677061, overlap 3677059 3677061 AAGCGAACCTAAAAA CCATCGGCCTGC GAAT GCAGGCCGATTT TTTATCTCGCCGTCG TERM 4900 3677084 - 3677059 - T 86 -13.3 -3.44381 | opp_overlap 3677061, overlap 3677058 3677061 AGCGAACCTAAAAAC CATCGGCCTGC GAAT GCAGGCCGATT TTTTATCTCGCCGTC TERM 4901 3677082 - 3677061 - T 100 -15.9 -3.28592 | opp_overlap 3677061, overlap 3677059 3677058 CGAACCTAAAAACCA TCGGCCTGC GAAT GCAGGCCGA TTTTTTATCTCGCCG TERM 4902 3677061 - 3677082 + T 100 -15.9 -5.36441 | opp_overlap 3677061 3677059 3677058 CGAACCTAAAAACCA TCGGCCTGC GAAT GCAGGCCGA TTTTTTATCTCGCCG STY3814 3677500 - 3677105 - | hypothetical protein yiiM 3678201 - 3677512 - | hypothetical protein TERM 4903 3678248 - 3678231 - R 100 -11.3 -5.71712 | opp_overlap 3678231 GCGGATACAAAAAAA GCGAGTC ATCA GACTCGC TTCTACAGACGTGCA TERM 4904 3678231 - 3678248 + r 77 -11.3 -3.29511 | opp_overlap 3678231 GCGGATACAAAAAAA GCGAGTC ATCA GACTCGC TTCTACAGACGTGCA sodA 3678891 - 3678271 - | superoxide dismutase TERM 4905 3678663 - 3678683 + g 100 -5.3 -5.626 | overlap 3678653 3678654 GGTTAGCGTGGCCGC CCGCGTTGT TAC GCAGCACGG TTTTTTTGTCCGCTG STY3819 3680221 - 3680736 + | membrane transporter STY3820 3680729 - 3682036 + | integral membrane transport protein TERM 4906 3682159 - 3682137 - T 100 -14.2 -5.48825 | CACCAGGTAAAAAAA CCGGCTACCT ATA AAGTAGCCGG AAAAGGGAATAAATA STY3821 3682875 - 3682192 - | hypothetical protein TERM 4907 3682598 - 3682586 - G 75 -6.9 -4.46212 | GTTTCCAGCACAAAA CCCGG TTG CCAGG CGACATCACCGGTTT TERM 4908 3682861 - 3682851 - G 76 -5.4 -4.78753 | overlap 3682846 GTAATAGTAAGAAAA GAGA TTT TCTC ATAACAGAATCCATT TERM 4909 3683015 - 3683003 - H 77 -3.5 -5.24291 | opp_overlap 3683003, overlap 3683012 AAAAGCAAAATAAAA TAAAT GAA ATTTA TATTCGTCATATAAA TERM 4910 3683062 - 3683079 + H 70 -4.9 -4.40184 | CATCAACAACGCCAA TATAGGG ATTT CCTTATA TTTATATTTCATTGA TERM 4911 3683903 - 3683914 + G 75 -3.6 -4.84359 | AAGGGGGACACATGA CGCT ACTT GGCG TTTTTGTCGCGCTGA rhaT 3683494 - 3684528 + | rhamnose-proton symporter rhaR 3685373 - 3684525 - | transcriptional activator RhaR rhaS 3686362 - 3685526 - | transcriptional activator RhaS rhaB 3686650 - 3688119 + | rhamnulokinase TERM 4912 3689168 - 3689157 - g 100 -7.2 -5.27779 | opp_overlap 3689157 CGCAACATGAAAAAA GCGC TACT GCGC GCTCTGCTGGAACCC rhaA 3688116 - 3689375 + | L-rhamnose isomerase TERM 4913 3690814 - 3690766 - g 70 -3.1 -4.81249 | overlap 3690767 3690768 3690793 3690795 CGGCAAAGTGAAAAA CGCCGGCGTACC-GCTGGTAGCG ATTAA CACTACG-GCAGGTACCGCGGCA GAGATGACCAGCAAC TERM 4914 3691272 - 3691320 + G 71 -11 -2.98942 | gap 1 ACCGTCCGAACGCCG TCGCGCGT-TTTGCCCGCATCGC ACAG GCGATGGGCGTGGAGACGCGCGG TATGTCTGACGAAGT STY3830 3690386 - 3691534 + | alcohol dehydrogenase yiiL 3691531 - 3691845 + | hypothetical protein TERM 4915 3691847 - 3691883 + T 85 -3.6 -5.49579 | gap 1, overlap 3691848 TCTATCTGCAGTAAG TCGTGTGCCCGAT-GGC GCAA GCTTACCGGGCCTACGG TTTTATTTTTTGTCG STY3832 3692500 - 3691934 - | hypothetical protein TERM 4916 3692245 - 3692262 + g 79 -3.3 -5.28176 | gap 1 CTTTGGTGCCTTCTC CGC-GGCG AAT CACCTGCG TTTTTTGTACCTGCG STY3833 3692583 - 3693242 + | hypothetical protein STY3834 3693242 - 3693487 + | hypothetical protein TERM 4917 3693823 - 3693837 + T 72 -8.5 -3.76167 | opp_overlap 3693823, overlap 3693821 GCATGAACGAAAAAA GCGCC TGATC GGCGC TCTTTATTGGTGTTA TERM 4918 3693837 - 3693823 - T 100 -8.5 -5.30155 | opp_overlap 3693821 3693823 GCATGAACGAAAAAA GCGCC TGATC GGCGC TCTTTATTGGTGTTA yiiG 3695008 - 3693908 - | putative lipoprotein TERM 4919 3693988 - 3694009 + g 71 -4.3 -4.65933 | overlap 3693990 3693996 CCGCAACCATCCATC CTGTTGCAG GGTC CTGCACCCG TTTCTTTTCAAAATC TERM 4920 3694871 - 3694923 + g 84 -9.1 -4.24726 | gap 2, opp_overlap 3694878 3694879, overlap 3694884 TTGCGTTTCCGGCGT CTGAGAAGGCGCTGG-CGTC-GCAG GCTGA CTGCTGGCGGCCGGCGTCGCCTCGG TTTTAACATTATTGT TERM 4921 3694884 - 3694919 + g 79 -13.8 -2.76291 | opp_overlap 3694878 3694879, overlap 3694871 GTCTGAGAAGGCGCT GGCGTCGCAGGCTGAC TGCT GGCGGCCGGCGTCGCC TCGGTTTTAACATTA STY3837 3695190 - 3696221 + | putative lipoprotein TERM 4922 3696311 - 3696293 - T 79 -10.2 -3.55761 | opp_overlap 3696295, overlap 3696295 TACCGACTGTCGAAA GAGCGCCC CAG GGGCGCTT TTTTCGTTCGAAGTA TERM 4923 3696295 - 3696309 + T 100 -12.8 -5.26875 | opp_overlap 3696293 3696295 CCGACTGTCGAAAGA GCGCCC CAG GGGCGC TTTTTTCGTTCGAAG TERM 4924 3696309 - 3696295 - T 85 -12.8 -3.35597 | opp_overlap 3696295, overlap 3696293 CCGACTGTCGAAAGA GCGCCC CAG GGGCGC TTTTTTCGTTCGAAG fdhD 3697300 - 3696497 - | formate dehydrogenase accessory protein TERM 4925 3696993 - 3697006 + g 71 -9.5 -3.53811 | opp_overlap 3696967 GTGCGTCCGGCCAGC GCGCG ACGA CGCGC TTTCAGCCCCATAAA TERM 4926 3698326 - 3698336 + G 81 -6.8 -4.83169 | overlap 3698315 TTCACGCGTACCGCG TCGG TGG CCGA TTTTTATGCGCCAAT TERM 4927 3699727 - 3699742 + G 80 -9 -4.09864 | overlap 3699702 GATGACGGTACGACG TCCAGC GGCT GCTGGA TTTTCGCCGGTAGCT TERM 4928 3700345 - 3700317 - g 70 -8.8 -3.62522 | overlap 3700318 GAAGCTGGCGAATAA GCTCGGTATCGC GCATG GCGATACCGTGA AGGTCTCCTCGAACC TERM 4929 3700344 - 3700318 - g 72 -12.3 -2.77192 | overlap 3700317 AAGCTGGCGAATAAG CTCGGTATCGC GCATG GCGATACCGTG AAGGTCTCCTCGAAC fdoG 3697528 - 3700578 + | formate dehydrogenase-O, major subunit TERM 4930 3700800 - 3700776 - g 74 -9.9 -3.63569 | TGAAGTGGGCAATAA CGTCGGGGTGT ATG ACAACCCGGCG GACTTAACTGCGAAA fdoH 3700591 - 3701493 + | formate dehydrogenase-O beta subunit fdoI 3701490 - 3702125 + | formate dehydrogenase-O subunit gamma TERM 4931 3702174 - 3702193 + G 83 -10.7 -3.9461 | opp_overlap 3702174 3702171 CGAGCGAGAAACGTA CGGCGGA TATGAT TCCGCCG TTATTGTTCCCCCGA fdhE 3702122 - 3703051 + | formate dehydrogenase accessory protein FdhE STY3844 3703463 - 3703089 - | hypothetical protein yiiF 3703711 - 3703463 - | CopG family DNA-binding protein TERM 4932 3703893 - 3703878 - H 75 -6.2 -4.43501 | AATCGAGTTATAAAA CTGTAT ATCC ATACAG ATAAAGGCAATGAAA STY3846 3703910 - 3704839 + | putative lipase TERM 4933 3704851 - 3704905 + F 84 -10.2 -3.96624 | opp_overlap 3704888 CTAAAATTCAATTTT GTTTTCAACTTGAAAACTGGATAACG TTG CGCTAAATTGTTTTCAGGTTGAAAAC TTTGTAATGGAACTA ygjN 3704925 - 3705236 + | hypothetical protein TERM 4934 3705500 - 3705489 - g 79 -7.2 -4.39828 | opp_overlap 3705489 3705495, overlap 3705476 AACACCTGGAGAAAA CGCC CCCT GGCG TTTCAGTATTGCGAA ygjM 3705233 - 3705679 + | hypothetical protein TERM 4935 3705674 - 3705699 + T 81 -12.7 -3.27298 | GCGGATGCCTTCATC GAGTAGTTGGA TATG TCCAGCTACTC TTCCTCATTCCCGCC yiiD 3706683 - 3705694 - | putative acetyltransferase yihZ 3707117 - 3706680 - | D-tyrosyl-tRNA deacylase TERM 4936 3706832 - 3706805 - G 71 -7.6 -4.01564 | gap 1 CAAAATATTCATAAA GCGCCTGCGCGCG ATC CG-GCGCAGCCCC GCCGGAAAAGCTTGG rbn 3707986 - 3707114 - | ribonuclease BN yihX 3708579 - 3707980 - | phosphatase TERM 4937 3708706 - 3708680 - R 75 -6.6 -4.3821 | overlap 3708681 AAAAGACAATAGAAA CGCAGACGAT GCCCAAT ATCGCCTGCA TCACAGCGCCGTTTT yihW 3709573 - 3708770 - | DeoR family transcriptional regulator TERM 4938 3709302 - 3709321 + g 89 -3.4 -5.48063 | TCCGGAATATAGTCA GCCACGGC TTCC GCAATGGC TTTTTTCTCTTGCGT yihV 3710503 - 3709607 - | putative sugar kinase TERM 4939 3709820 - 3709834 + g 89 -9.2 -4.57341 | GGTAAAACCCGGTTG GTGGCG TAC CGCCGC TTTTTCCAACCAGTT yihU 3710668 - 3711564 + | putative oxidoreductase TERM 4940 3711776 - 3711790 + G 74 -10 -3.7511 | TATGCCTCTGCCGTT CTGCTG GAT CAGCAG TTCTGTTATCGCCAG yihT 3711587 - 3712465 + | putative aldolase TERM 4941 3713334 - 3713370 + F 72 -4.9 -4.57755 | GTCTGTTCCATGCCA CTATCCGCGACGCCTGG GCG CCAGATGGCGCAGACGG TTTTGTCTACTCAGT TERM 4942 3714037 - 3714065 + G 78 -6 -4.83169 | gap 1, opp_overlap 3714037, overlap 3714040 3714042 CTGGCAGATTAATTA TCAGTCGGCGACG GAAG CGTCGCTAAC-GA TTTTTCTGCCGCCCT TERM 4943 3714288 - 3714257 - g 81 -13 -3.13522 | opp_overlap 3714256 3714255, overlap 3714255 3714275 AGCTGTGTATTAACA CTGCCTGCAAGCGA AGAA TTGCCCGCAGGCAG GAATTTTTCCGCATC yihR 3713726 - 3714478 + | hypothetical protein TERM 4944 3715151 - 3715141 - g 71 -8.2 -3.83347 | overlap 3715142 AGACTGTAAAGAGAA CGCC GGC GGCG ACTATTACTGGACCT yihQ 3714626 - 3716662 + | alpha-glucosidase TERM 4945 3716697 - 3716665 - f 71 -9.8 -3.1577 | gap 1, overlap 3716663 3716684 ACGGAATATCTAATA CGGCTCGCCCGCAGG GAAA CCTGCGGGC-AGATG GAGAAGAATAATGAG TERM 4946 3717074 - 3717060 - g 71 -4.2 -4.62336 | opp_overlap 3717061 3717063 3717064, overlap 3717061 AGGTGACGGGAAAAA CCGTCG TCG CAACGA TGCTGTTTATGCTGT yihP 3716708 - 3718090 + | putative membrane permease TERM 4947 3718125 - 3718102 - f 78 -5.2 -5.00467 | opp_overlap 3718107, overlap 3718107 TTAACAACAATAAAA TATAACGCCC TGCG GGGCGTTTTG AGAGGCGATTATGTC TERM 4948 3718107 - 3718120 + F 83 -9.5 -4.08064 | opp_overlap 3718107 3718102 AACAATAAAATATAA CGCCC TGCG GGGCG TTTTGAGAGGCGATT TERM 4949 3718120 - 3718107 - f 83 -9.5 -4.12416 | opp_overlap 3718107, overlap 3718102 AACAATAAAATATAA CGCCC TGCG GGGCG TTTTGAGAGGCGATT TERM 4950 3718589 - 3718576 - g 72 -3.7 -4.77036 | overlap 3718577 3718578 CGCTATTACCAAAAA TCCGC ATGA GCGGG CCCAGCTCGCCGCAT TERM 4951 3718701 - 3718715 + G 76 -2.8 -5.1287 | CTTCGCTGGGTTATC TGGTTG CAG CAGTCA TTTTTTCGGTCTGCG STY3861 3718136 - 3719557 + | putative membrane permease TERM 4952 3720084 - 3720101 + G 70 -2.8 -4.81863 | GGTAACTATTGGAAT TTTATC ATTACC GATAAA TTTTCTTATACCTTT STY3862 3719625 - 3720317 + | outer membrane porin L TERM 4953 3720352 - 3720372 + F 72 -10.4 -2.80195 | opp_overlap 3720352, overlap 3720349 CGAATCTGCATCACA GCGGGTAG TTGTT CTGCCCGC TCATTCATCCTGAAT STY3863 3720474 - 3721322 + | hypothetical protein TERM 4954 3721567 - 3721579 + G 76 -3.4 -5.00884 | TAAACGCGATCGGTC TGGA CTATA TCCA TTTTTTGCAGAACAT STY3864 3721335 - 3721619 + | hypothetical protein TERM 4955 3721672 - 3721662 - f 87 -6.8 -5.24129 | opp_overlap 3721661, overlap 3721664 CTGTTGGATAAAAAA CGCT GCA AGCG GCGCTTACTGGAACA TERM 4956 3721816 - 3721857 + G 95 -15.3 -3.53761 | gap 1, overlap 3721819 TTGGCGCGGCGGGCG TTATC-GCTTTGCGCCGTCA TCC TGACGGCGCAAAGCAGGTGC TTTACAGCGCGATTG TERM 4957 3721819 - 3721854 + G 100 -19.2 -2.90496 | gap 1, overlap 3721816 GCGCGGCGGGCGTTA TC-GCTTTGCGCCGTCA TCC TGACGGCGCAAAGCAGG TGCTTTACAGCGCGA STY3865 3721752 - 3722360 + | hypothetical protein TERM 4958 3722759 - 3722735 - g 72 -2.1 -4.91459 | opp_overlap 3722755 CAACATGGATAAAAA GTCTGGAAA ATAAAGG CTACCAGAC CATCTGTATTGGCGG TERM 4959 3722944 - 3722909 - g 70 -5.4 -4.45485 | gap 1, opp_overlap 3722909 ATTATATCCAGAAAA TCATGGCCGAACGTGCT GGC AGC-CAACCGGTCATGA TGTATATCAATATCG STY3866 3722353 - 3723228 + | hypothetical protein TERM 4960 3724599 - 3724585 - g 100 -9.2 -5.37345 | opp_overlap 3724596, overlap 3724595 CGCAACGATAAAAAA CGCGAC GAA GCCGCG CTATGGCGCATGGTT TERM 4961 3725142 - 3725158 + G 75 -3.6 -4.94972 | overlap 3725146 AAAAAGTATTTTTAT GAACGC AGAAG GCGATC TTTTTGCTTGTCATA STY3869 3724468 - 3725346 + | hypothetical protein STY3870 3725331 - 3726065 + | hypothetical protein TERM 4962 3726097 - 3726071 - T 100 -8.7 -5.80364 | opp_overlap 3726071 ACGTGAATAAAAAAA CCCCGCCGA GTTTTCATT TCGGCAGGG TTTTTATCCGTAAGA TERM 4963 3726071 - 3726097 + T 88 -8.6 -4.87665 | opp_overlap 3726071 ACGTGAATAAAAAAA CCCCGCCGAGTT TTC ATTTCGGCAGGG TTTTTATCCGTAAGA typA 3727943 - 3726120 - | GTP-binding protein TERM 4964 3728096 - 3728110 + H 73 -10 -3.37959 | overlap 3728105 3728107 GGCTTGCGTTCTATT GCACCA ATG TGGTGC TTAATGTTCACATTG TERM 4965 3728105 - 3728133 + H 72 -6.2 -4.2558 | gap 1, opp_overlap 3728128 3728131, overlap 3728096 3728107 TCTATTGCACCAATG TGGTGCTT-AATG TTCA CATTGAAGCACTA TTTTGGTGCAACATA TERM 4966 3729106 - 3729096 - g 70 -6.8 -4.13945 | ACCTTTATGCCAAAA CCGA TGT TCGG CGATAACGGTTCCGG glnA 3728319 - 3729728 + | glutamine synthetase TERM 4967 3729890 - 3729907 + F 100 -11.3 -5.24129 | CCGTGGAAACTTTCA GCCCATC CCAG GATGGGC TTTTTTCTCCACCAA TERM 4968 3730457 - 3730431 - g 80 -4.9 -5.01811 | overlap 3730432 GCACGAAATCAAAAA TCCGCTCGGCG GCCTG CGCGGCGCGGC GCAGCTACTCAGCAA TERM 4969 3730644 - 3730660 + G 70 -10.1 -3.31322 | opp_overlap 3730642 GGTGTCGATGGAACT GCCGGAT AAT GTCCGGC TTATCCGCGATTACG glnL 3730003 - 3731052 + | nitrogen regulation protein NR(II) TERM 4970 3732013 - 3732031 + G 80 -4.4 -5.03314 | opp_overlap 3732013, overlap 3732015 AGCGCCGTGAGGATA TTCCGCGC CTG GCGCGCCA TTTTTTGCAGGTCGC glnG 3731061 - 3732470 + | nitrogen regulation protein NR(I) hemN 3734156 - 3732783 - | coproporphyrinogen III oxidase yihI 3734860 - 3734345 - | hypothetical protein TERM 4971 3734730 - 3734752 + g 80 -4.7 -5.03747 | overlap 3734732 CCGCCCGCCGCGCGA CTTCCCGGC GCATG GCCGCGATG TTTTTTCAGGCGTTT TERM 4972 3734973 - 3734920 - R 100 -19.9 -3.99405 | opp_overlap 3734936, overlap 3734936 GGAATCTAGCAGAAA GCAAGCAAAGAAAAAAGGCGACAGA GTAA TCTGCCGCCTTTTTTCTTGACTCAC GACCCTTAACGGGTT TERM 4973 3734957 - 3734936 - R 100 -12.3 -5.72053 | opp_overlap 3734936, overlap 3734920 CAAGCAAAGAAAAAA GGCGACAGA GTAA TCTGCCGCC TTTTTTCTTGACTCA TERM 4974 3734936 - 3734957 + r 100 -10.1 -5.4833 | opp_overlap 3734936 3734920 CAAGCAAAGAAAAAA GGCGACAGA GTAA TCTGCCGCC TTTTTTCTTGACTCA STY3879 3735203 - 3734979 - | hypothetical protein TERM 4975 3735072 - 3735083 + g 71 -5.8 -4.23674 | opp_overlap 3735072, overlap 3735068 ATTTCCTTTTACTAA CGTC TCCG GACG TTTGTCTTCCTGACA TERM 4976 3735622 - 3735594 - g 81 -2.3 -5.30155 | TGACCAACCAAAAAA GCCTGGCGC GCACCTCTAAA ACGCCGGGC CGTACCCAATTGATT TERM 4977 3735758 - 3735782 + G 71 -6.3 -4.29738 | opp_overlap 3735758 GAATATCTGGAGAAA CGTCAAAGCCT ACA GGGCTTAGTCG TTTTAATGGATATCC STY3880 3735443 - 3736075 + | GTPase EngB TERM 4978 3736195 - 3736169 - T 100 -18.1 -5.45652 | opp_overlap 3736162 ACGCCCAATAAAAAA CGCCCCAGTCA TAAAC TGACTGGGGCG GCTAAAATATTCAGC polA 3739207 - 3736421 - | DNA polymerase I TERM 4979 3736679 - 3736712 + g 74 -11.5 -3.25802 | overlap 3736689 3736696 3736700 CATGGGAGCATTGAT CGCCGCGCGTTCCGC CCCC GCGCGCCGCGCCGCG TTGCTGGATTTAATA TERM 4980 3737392 - 3737403 + g 83 -7.2 -4.63486 | overlap 3737385 CCGACGTTGACGGCG CGCC GCCA GGCG TTTTCTTCAACGGCT yihG 3739595 - 3740503 + | putative acyltransferase TERM 4981 3740488 - 3740512 + T 100 -14.3 -5.8096 | opp_overlap 3740491, overlap 3740491 TAAAACATCTTATAA AAACGCCGGTC AGT GACCGGCGTTC TTTTTATTTTTTATC TERM 4982 3740491 - 3740509 + T 100 -16 -4.8855 | opp_overlap 3740491, overlap 3740488 AACATCTTATAAAAA CGCCGGTC AGT GACCGGCG TTCTTTTTATTTTTT TERM 4983 3740509 - 3740491 - T 100 -16 -4.87273 | opp_overlap 3740491 3740488 AACATCTTATAAAAA CGCCGGTC AGT GACCGGCG TTCTTTTTATTTTTT dsbA 3741139 - 3740516 - | periplasmic protein disulfide isomerase I TERM 4984 3740921 - 3740936 + g 80 -4.6 -5.10208 | overlap 3740923 GTACTTGGTCATCTT GGTGCC TTTC GGCAGC TTTTTCTTCACATTG TERM 4985 3741025 - 3741011 - G 82 -5.6 -5.01535 | overlap 3741013 GTAGAATGAGAAAAA CTCCAG TAC CTGGGG TTCGCCAGCGACCGG yihE 3742142 - 3741156 - | serine/threonine protein kinase TERM 4986 3741242 - 3741264 + g 91 -7.7 -5.00616 | opp_overlap 3741241 GTCGCTGCCAGTAAT CTTCCCCTG TTAAC CAGGGAAAG TTTTTTGGAAACGCA TERM 4987 3741610 - 3741629 + g 87 -8.6 -4.56597 | GACAGTAGAGTATCA GTGGCTTT CAGG AAAGCCGC TTTTTGCCCGGAGGG yihD 3742488 - 3742219 - | hypothetical protein TERM 4988 3742945 - 3742965 + G 70 -9.7 -3.41693 | opp_overlap 3742945 GTTCATGATGGAGAA CGCGATCAT CCA ACGATCGCG TTGATTAATCGTGCC TERM 4989 3742965 - 3742945 - g 80 -11.9 -3.37796 | opp_overlap 3742945 GTTCATGATGGAGAA CGCGATCAT CCA ACGATCGCG TTGATTAATCGTGCC mobA 3742558 - 3743142 + | molybdopterin-guanine dinucleotide biosynthesis protein A mobB 3743139 - 3743654 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 4990 3743665 - 3743709 + F 79 -11.4 -3.30243 | gap 1, opp_overlap 3743664 3743665, overlap 3743690 3743692 TGTAGGCCGGATAAG GCGGAGCCGCCATCCGGCGGT GCAG GTTGCCTGATGGCG-CTGCGC TTATCAGGCCTACAT TERM 4991 3743752 - 3743771 + F 100 -13.6 -3.71924 | opp_overlap 3743752 CACACATGCAAAAAA GCCCATCC GTCA GGATGGGC TTCTTCACTAATTTG TERM 4992 3743771 - 3743752 - f 100 -13.6 -5.14477 | opp_overlap 3743752 CACACATGCAAAAAA GCCCATCC GTCA GGATGGGC TTCTTCACTAATTTG TERM 4993 3746465 - 3746483 + F 70 -8.8 -3.35798 | overlap 3746468 TTCACCACTGGCTTA GTGGTGGG GCT CCCACTGC TTGTACGTACACGGT TERM 4994 3746517 - 3746529 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4995 3747071 - 3747095 + F 71 -8 -3.93061 | gap 1, opp_overlap 3747069 3747077, overlap 3747073 3747074 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 4996 3747134 - 3747171 + F 77 -3.4 -5.14563 | opp_overlap 3747130 3747136, overlap 3747136 ATTTTTAAAGAGCAA AACTTCGCAGTGAACC CTTTCA GGTACACTCTGAAGTA TTTTTTCGTAAACAC TERM 4997 3749268 - 3749284 + F 76 -5.1 -4.75954 | TATATTACGCTTTCC CGCTTCA GAG TCAAGCG TTTATTTTCGCTTTT TERM 4998 3749625 - 3749615 - g 70 -6.8 -4.07568 | TGTTCTGGCTGAAAA GCTG GCG CAGC GGATATTAAAGGGTG STY3888 3749553 - 3750257 + | hypothetical protein TERM 4999 3750299 - 3750325 + T 71 -7.3 -4.06419 | gap 2 GCGCGCAGTATGGCT GGCC-T-GCCGTG GAT CGCGGCGATGGCC TTCTTTATGCAGGCG TERM 5000 3750555 - 3750575 + T 75 -6.2 -4.42748 | TGGCCTGCGCGCTCT CCAGTTCA CTATC TGAATTGG TTATTTTTCGCGTCG rbsR 3752660 - 3751662 - | transcriptional repressor RbsR TERM 5001 3751900 - 3751886 - G 71 -11.4 -2.87132 | overlap 3751847 GCCCCGCCTGATATA GCGCCT GAT AGGCGC CGACAGCCATCGCAT rbsK 3753593 - 3752664 - | ribokinase TERM 5002 3752878 - 3752892 + g 77 -11.4 -3.59979 | opp_overlap 3752877 3752876 3752869 3752868 CTAAATCCAGGAACG CGGCGA CCC TCGCCG TTTACGCTGGCCCAG rbsB 3754616 - 3753726 - | D-ribose transporter subunit RbsB TERM 5003 3754167 - 3754184 + g 76 -3.3 -5.04385 | overlap 3754168 3754169 TTGCAGCTCAATCAC TTTGGCG CCTT CGCCAGC TTTTTTCGCGATATA rbsC 3755606 - 3754641 - | ribose ABC transporter permease protein TERM 5004 3755502 - 3755490 - G 76 -3.4 -5.10029 | ATTAACGGTAAAAAA GTTG GGGCT CAAC GTCGAAACAATCGCG rbsA 3757117 - 3755612 - | D-ribose transporter ATP binding protein rbsD 3757544 - 3757125 - | D-ribose pyranase TERM 5005 3757194 - 3757211 + g 81 -4.1 -5.2166 | overlap 3757195 3757208 3757209 GCTGCGAATCACTGC CTGACTG TCTG CAGTCAA TTTTTTGAATTGTTC TERM 5006 3757671 - 3757694 + r 90 -14 -3.32343 | opp_overlap 3757673 3757676, overlap 3757676 CGGAAATCAGGTGAA GATAATCGCC CAAT GGCGATTATC TTGTGGGAATCTACG TERM 5007 3757692 - 3757673 - R 73 -10.8 -3.0873 | opp_overlap 3757671 3757676, overlap 3757676 GAAATCAGGTGAAGA TAATCGCC CAAT GGCGATTA TCTTGTGGGAATCTA TERM 5008 3757676 - 3757689 + r 72 -8.1 -3.75378 | opp_overlap 3757673 3757676, overlap 3757671 ATCAGGTGAAGATAA TCGCC CAAT GGCGA TTATCTTGTGGGAAT TERM 5009 3757689 - 3757676 - R 72 -8.1 -3.67878 | opp_overlap 3757676 3757671, overlap 3757673 ATCAGGTGAAGATAA TCGCC CAAT GGCGA TTATCTTGTGGGAAT trkD 3759629 - 3757761 - | potassium transport protein Kup TERM 5010 3759826 - 3759812 - H 79 -4.2 -5.24129 | overlap 3759813 TTGGCCCACAAAAAA GCGCAC AGT ATGCAC GATTAATCATAAAAT TERM 5011 3760168 - 3760179 + G 77 -7.2 -4.26589 | GAAGTTTGCTTTCCA GCGC GCCC GCGC TTTTGAATATCTGAT TERM 5012 3760461 - 3760445 - g 70 -10.1 -3.33696 | GCGGCCTCTAACGAA CTGCCCG AAG CGGACAG CAGCCTGGAAGCCTT TERM 5013 3760644 - 3760628 - g 73 -5.1 -4.62302 | CAACAGTGGCAAAAA GATATCG GCG CGATTTC ACTGCCTGATCCGGT TERM 5014 3761004 - 3760977 - g 70 -5.6 -4.51799 | opp_overlap 3760977, overlap 3760968 AGCAAAGCGATAAAA CCGCCTTC ACCGTCATTAAA GAAGGCGG TATGTTCAGCCGTCG yieN 3759977 - 3761473 + | regulatory ATPase RavA TERM 5015 3761611 - 3761598 - g 77 -3.7 -5.03314 | TCCACGTTTAAAAAA CGCCG TGAC CGCCG ATCTCCCGCGCTGGC TERM 5016 3762088 - 3762072 - g 74 -10.1 -3.67188 | overlap 3762070 ACTGATCGTAAAATA CGGCGAA TTT CTCGCCG CCCAGCCGGAGCTAA TERM 5017 3762517 - 3762540 + G 83 -8 -4.40181 | overlap 3762519 GCGTTGATGCGCGTT GCGCTGGCGG ATAA CCGCCGCTGC TTTATTATGCTGTTT yieM 3761467 - 3762918 + | hypothetical protein asnA 3763915 - 3762923 - | asparagine synthetase AsnA TERM 5018 3763606 - 3763661 + g 91 -17.1 -2.73875 | gap 2 GCGGAGAGAGTCGGT CTTCATCG-GGGCGAAGGGCT-TTCAT GTGC GTGTACAGCCCTTCGCCCGCGCTGAAG TCATGTTGCCCCAGG TERM 5019 3764497 - 3764529 + G 85 -4.2 -5.14563 | gap 1, opp_overlap 3764497 3764498, overlap 3764498 GATCGTCTTGCAGAA CCCGATCATGCGC ACCATCAA GC-CATGATCGGC TTTTTTAATCCCACA asnC 3764066 - 3764524 + | DNA-binding transcriptional regulator AsnC mioC 3764614 - 3765057 + | flavodoxin TERM 5020 3767145 - 3767119 - g 70 -3 -4.7173 | overlap 3767138 GATGAGATTGAAAAA CAACTACGTA ACGAGAA TACGTTGCTG CCTGCCACGCTGGAT gidA 3765436 - 3767325 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA gidB 3767428 - 3768051 + | glucose-inhibited division protein B atpI 3768665 - 3769045 + | F0F1 ATP synthase subunit I TERM 5021 3769367 - 3769387 + G 74 -11.1 -3.29325 | overlap 3769365 TGATTGCGCCGCTGG CCCTGACGA TTT TCGTCTGGG TATTCCTTATGAACC atpB 3769054 - 3769869 + | F0F1 ATP synthase subunit A atpE 3769916 - 3770155 + | F0F1 ATP synthase subunit C TERM 5022 3770341 - 3770320 - g 71 -7.3 -3.92869 | opp_overlap 3770313 3770312 GCAGCCATCGAGAAA CGTCAGAAA GAAA TTGCTGACG GTCTCGCTTCTGCTG atpF 3770215 - 3770685 + | F0F1 ATP synthase subunit B atpH 3770700 - 3771233 + | F0F1 ATP synthase subunit delta TERM 5023 3771808 - 3771772 - g 83 -10.1 -4.13014 | overlap 3771773 3771800 GTCAGACCGGTAAAA CCGCGCTGGCTATCGAC GCC ATCATCAACCAGCGCGA CTCCGGCATCAAATG TERM 5024 3771807 - 3771773 - g 72 -11.4 -3.07487 | overlap 3771772 3771800 TCAGACCGGTAAAAC CGCGCTGGCTATCGAC GCC ATCATCAACCAGCGCG ACTCCGGCATCAAAT atpA 3771246 - 3772787 + | F0F1 ATP synthase subunit alpha TERM 5025 3773013 - 3772980 - g 79 -12.5 -2.91264 | opp_overlap 3772980, overlap 3772991 GTCCTTATGCAGAGA CCATGCGCAAAGTGA TTGG TCACCTTGCGAACGG TAATCTGGAATATAA atpG 3772838 - 3773701 + | F0F1 ATP synthase subunit gamma atpD 3773728 - 3775110 + | F0F1 ATP synthase subunit beta atpC 3775131 - 3775550 + | F0F1 ATP synthase subunit epsilon TERM 5026 3775572 - 3775591 + F 100 -10 -6.00086 | opp_overlap 3775567 3775572 CTTGAAAGCATAAAA CCAGTCTG ATTG CGGACTGG TTTTTTTTATCCTCT TERM 5027 3775591 - 3775572 - f 82 -7.8 -4.61566 | opp_overlap 3775572, overlap 3775567 CTTGAAAGCATAAAA CCAGTCTG ATTG CGGACTGG TTTTTTTTATCCTCT TERM 5028 3775666 - 3775679 + F 81 -8.1 -4.43879 | opp_overlap 3775644, overlap 3775659 AAGGCGATGCGTTTT CAGCG ACAG CGCTG TTTTCATTAAATCCT TERM 5029 3775867 - 3775882 + G 75 -6 -4.55023 | overlap 3775880 CTTATCTTCATCTCG CCGTCG CCAT CGTCGG TTTTATCGTGTTGAG STY3915 3775779 - 3776477 + | hypothetical protein TERM 5030 3776521 - 3776502 - f 83 -9.2 -4.27584 | opp_overlap 3776502 ACGCGCAACGGAAAA CCAGCGGC CTCT GTCGCTGG TTTTTGCTTTTCTGA TERM 5031 3776502 - 3776521 + F 100 -11.4 -5.1417 | opp_overlap 3776502 ACGCGCAACGGAAAA CCAGCGGC CTCT GTCGCTGG TTTTTGCTTTTCTGA TERM 5032 3777059 - 3777069 + G 74 -2.4 -5.00884 | GTCACGCAATGCAGC AGGC CGC GCCC TTTTTTAGCGACGAT glmU 3776797 - 3778167 + | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 5033 3779167 - 3779153 - g 74 -4.9 -4.74801 | opp_overlap 3779156, overlap 3779156 GAACGCGATCAAAAA CACCC TTACC GGGCG CATCAGCCACGGTCA glmS 3778356 - 3780185 + | D-fructose-6-phosphate amidotransferase TERM 5034 3780200 - 3780236 + F 78 -12.6 -2.75708 | gap 1, opp_overlap 3780209, overlap 3780209 AGTCAAATGTTGTAC CA-AAAAAAAGGCTGTC GATA GACGGCCTTTTTTTATG AGTTTTTTGAACAAA TERM 5035 3780226 - 3780209 - f 100 -6.9 -5.86061 | opp_overlap 3780200 3780209 TTGTACCAAAAAAAA GGCTGTC GATA GACGGCC TTTTTTTATGAGTTT TERM 5036 3780209 - 3780226 + F 100 -9.1 -5.68039 | opp_overlap 3780209, overlap 3780200 TTGTACCAAAAAAAA GGCTGTC GATA GACGGCC TTTTTTTATGAGTTT TERM 5037 3780350 - 3780337 - f 73 -2.5 -5.14819 | opp_overlap 3780338, overlap 3780338 AAACTAAAAAATAAA TTTTT TCCT AAAAA TATGTACGTTAAATG stgA 3780596 - 3781171 + | fimbrial subunit protein TERM 5038 3781208 - 3781254 + F 100 -8.1 -5.24129 | gap 1 TTTTATTAATTTATT GACGCCTGCCATTGTGAACAAC TGTA GTTGTATA-AATGCCCGGCGTC TTTTTTATCCAGGGA stgB 3781269 - 3781967 + | fimbrial chaperone protein TERM 5039 3785306 - 3785286 - g 74 -6.9 -4.33767 | ATAAAGTGACTAAAA CGGTACA GGTGAAA TGTACCG GAATGTTGGATGAGA stgD 3784535 - 3785602 + | fimbrial protein STY3923 3787390 - 3785633 - | hypothetical protein TERM 5040 3786529 - 3786560 + g 70 -6.6 -4.08216 | opp_overlap 3786533, overlap 3786526 3786532 GGCCGAAATAGTGGT CAAAGGCCTTCATT TGCA GATGAAAGCCATTG TTTTCCACCACCTCA TERM 5041 3787066 - 3787088 + g 73 -6.2 -4.40561 | AGCCCAGTTTTGAGC GCAGCAGTTG CGC CACCTGGTGC TTATTTTTACCCAGC aroE 3787485 - 3788255 + | shikimate 5-dehydrogenase STY3925 3788304 - 3789677 + | PTS system permease TERM 5042 3789695 - 3789721 + F 100 -12.2 -5.67283 | CATCTCCCCCTGCAG GCTGGTCTGGTG TCT CCCCGGGCCAGC TTTTTTATTTCCATT TERM 5043 3790130 - 3790107 - g 86 -7.4 -4.72272 | opp_overlap 3790107 CTGTCTGACGAAAAA CTGAATCAGG AAGG CCTGTTCCAG TTTCCGACGGTGATC TERM 5044 3790734 - 3790716 - g 72 -3.8 -4.69559 | AAAGCGCAAAAGAAA CCTGAGCA GGG TGCTGAAG TGTTGAAGTTCTTCG pstS 3789843 - 3790883 + | phosphate transporter subunit TERM 5045 3791074 - 3791103 + G 77 -11.5 -3.53933 | gap 1, overlap 3791097 AAGGCGACATGATTT TCAGCGC-GCTGGT AAA ACTGGCTGCGCTGA TTGTGCTATTGATGT pstC 3791019 - 3791978 + | phosphate transporter permease subunit TERM 5046 3792209 - 3792183 - g 93 -17.3 -2.94144 | gap 1, overlap 3792180 TGTTTACCGAAATGA CGCCG-CCGCCG AACA CGGCGGGCGGCG GGCTGGCGAACGCCC pstA 3791978 - 3792868 + | phosphate transporter permease subunit pstB 3792955 - 3793728 + | phosphate transporter subunit phoU 3793743 - 3794468 + | transcriptional regulator PhoU TERM 5047 3794528 - 3794556 + T 86 -11 -3.75332 | gap 1, overlap 3794529 GGTACAGATGCTGTA GGCCGGATGAGCG TTAG CGC-CATCCGGCA TTTCAGTTAACGCGT TERM 5048 3794529 - 3794555 + T 87 -14.5 -2.84878 | gap 1, overlap 3794528 GTACAGATGCTGTAG GCCGGATGAGCG TTAG CGC-CATCCGGC ATTTCAGTTAACGCG STY3931 3795228 - 3794563 - | 6-phosphogluconate phosphatase TERM 5049 3795518 - 3795532 + G 74 -2.1 -5.06414 | TTACCACTTTCCTGA CGATG GTTTA TATCG TTTTTGTTAACCCGC TERM 5050 3796261 - 3796281 + G 74 -6.7 -4.28111 | overlap 3796263 GAGAAAGGCAAATTC CCGCGCATG AAG CAGGCGCTG TTTGTTGATAGTATC yieG 3795271 - 3796734 + | putative membrane transport protein TERM 5051 3796742 - 3796768 + T 93 -12.2 -3.68619 | opp_overlap 3796740 3796744, overlap 3796744 CACACTGATGAAATG AACCCTCGCCCC ATC GGGGGGAGGGTG TTTAACTAACTTACG TERM 5052 3796766 - 3796744 - T 95 -14.8 -3.57418 | opp_overlap 3796742 3796744, overlap 3796740 CACTGATGAAATGAA CCCTCGCCCC ATC GGGGGGAGGG TGTTTAACTAACTTA TERM 5053 3796744 - 3796766 + T 93 -14.8 -3.42283 | opp_overlap 3796744 3796740, overlap 3796742 CACTGATGAAATGAA CCCTCGCCCC ATC GGGGGGAGGG TGTTTAACTAACTTA STY3933 3797345 - 3796779 - | hypothetical protein yieE 3798118 - 3797363 - | hypothetical protein yidZ 3799235 - 3798276 - | DNA-binding transcriptional regulator YidZ yidY 3800391 - 3799204 - | multidrug efflux system protein MdtL TERM 5054 3800426 - 3800384 - GR 75 -6.4 -4.53163 | overlap 3800379 CTACACAGTAGAAAA CGT-TTCATAGCGGCCTCAC GAAAA GTGTGGC-GCTAAGAATACG GGGCGACGTTGCGCG trmE 3801938 - 3800574 - | tRNA modification GTPase TrmE TERM 5055 3801965 - 3801992 + r 78 -12.8 -2.58861 | opp_overlap 3801970, overlap 3801970 ACTTTGTTGCAATAA AAAAAGGCGGTC ATAT GACCGCCTTTTG ATTGTAGGCCTGATA TERM 5056 3801970 - 3801987 + r 100 -12.7 -4.48987 | opp_overlap 3801970, overlap 3801965 GTTGCAATAAAAAAA GGCGGTC ATAT GACCGCC TTTTGATTGTAGGCC TERM 5057 3801987 - 3801970 - R 100 -12.7 -5.7946 | opp_overlap 3801965 3801970 GTTGCAATAAAAAAA GGCGGTC ATAT GACCGCC TTTTGATTGTAGGCC yidC 3803726 - 3802080 - | putative inner membrane protein translocase component YidC TERM 5058 3803376 - 3803392 + g 89 -13.7 -3.58343 | GTTATCCGGGCCGTC GCGGCCT GTC AGGCCGC TTTGCGCCTGATAGA rnpA 3804309 - 3803950 - | ribonuclease P rpmH 3804466 - 3804326 - | 50S ribosomal protein L34 TERM 5059 3805429 - 3805405 - g 71 -10.8 -3.29043 | gap 1, opp_overlap 3805372, overlap 3805428 AACGCCTGTGCATAA CGTTGTC-GCG CCTA CGCAGACAACG ACGGCGCAACCGCAG TERM 5060 3806075 - 3806051 - g 91 -7.1 -5.14965 | overlap 3806067 ATCCTGATGAAAAAA GCGGACGAAAA TGA TATTCGTCTGC CAGGCGAAGTAGCGT dnaA 3805127 - 3806527 + | chromosomal replication initiation protein TERM 5061 3806599 - 3806568 - g 81 -8.6 -4.30809 | gap 1, opp_overlap 3806593 GAACATTTATTAAAA CCGCTTCAGCAGGTC AGC GGCCCGCTGG-GCGG TCGTCCTACGCTGCC dnaN 3806532 - 3807632 + | DNA polymerase III subunit beta recF 3807830 - 3808903 + | recombination protein F TERM 5062 3809130 - 3809105 - g 73 -10.5 -3.38046 | overlap 3809103 GGGTCACTGTAAAGA TATCGTCGTGA CTAT TCACGCCGATA ACTCCGTGTCCGTAA TERM 5063 3811059 - 3811043 - g 72 -12.3 -2.75992 | overlap 3811040 3811056 TCTGATTGAAGAGGA CGCGTTC ATC GAACGCG GCGAGCGTCGCCAGC gyrB 3808932 - 3811346 + | DNA gyrase subunit B STY3944 3812261 - 3811353 - | LysR family transcriptioanl regulator TERM 5064 3811465 - 3811428 - G 77 -11.1 -3.60074 | opp_overlap 3811421 3811420 3811429, overlap 3811419 3811429 TAGAAACTCTTTAAA GCGCTGCGTGGCGGGCG TTTG CGCGCGCCACGCATGGA AATAAAGGTTCATAT TERM 5065 3811464 - 3811429 - G 83 -14.6 -2.75562 | opp_overlap 3811429 3811421 3811420, overlap 3811428 3811419 AGAAACTCTTTAAAG CGCTGCGTGGCGGGCG TTTG CGCGCGCCACGCATGG AAATAAAGGTTCATA TERM 5066 3811767 - 3811780 + g 71 -4.5 -4.59993 | GTACAGGGCGATTTC CGTTG TGAA CAGCG TTTGTTTGTCGATTT TERM 5067 3811979 - 3811945 - G 100 -12.8 -4.37092 | opp_overlap 3811973, overlap 3811948 ATTTGCGGCAGAAAA GCACAGGCGATCAGCG GCG CGCCGACCACCCGCAC CAGGGATTTTTTGAT TERM 5068 3811976 - 3811948 - G 83 -13.1 -3.1733 | opp_overlap 3811973, overlap 3811945 TGCGGCAGAAAAGCA CAGGCGATCAGCG GCG CGCCGACCACCCG CACCAGGGATTTTTT TERM 5069 3812339 - 3812375 + r 76 -7.9 -4.20148 | opp_overlap 3812338 3812340 3812343, overlap 3812344 ATACGACTCGCAAAT ACAGGGTGTCTGCCTGC GGC GCAGGCAGACAGTTGGC TTATTTTACGGTGAT TERM 5070 3812373 - 3812340 - R 70 -8.9 -3.36991 | gap 1, opp_overlap 3812339 3812344, overlap 3812338 3812343 TACGACTCGCAAATA CAGGGTGTCTGCCTGC GGC GCAGGCAGACAGT-TG GCTTATTTTACGGTG TERM 5071 3812371 - 3812343 - R 76 -11.7 -2.54801 | opp_overlap 3812339 3812344, overlap 3812340 3812338 GACTCGCAAATACAG GGTGTCTGCCTGC GGC GCAGGCAGACAGT TGGCTTATTTTACGG TERM 5072 3812344 - 3812370 + r 100 -15.2 -3.37556 | opp_overlap 3812343 3812340 3812338, overlap 3812339 ACTCGCAAATACAGG GTGTCTGCCTGC GGC GCAGGCAGACAG TTGGCTTATTTTACG STY3945 3813569 - 3812376 - | racemase STY3946 3814845 - 3813583 - | putative membrane transport protein yidA 3815134 - 3815946 + | sugar phosphatase TERM 5073 3815953 - 3815976 + F 71 -10.2 -2.74012 | CTGTCCTGATTCACT CCGGCCCGAT CGCC GTCGGGCCGA TAGTTCCACTCATGA TERM 5074 3816220 - 3816238 + G 90 -11.7 -3.95073 | GCGGCTACCAGCCCC CCGGCGA ACCTG TCGCCGG TTTATAGCTATCAGG STY3948 3816148 - 3817170 + | hypothetical protein TERM 5075 3818225 - 3818244 + G 75 -12.8 -2.52896 | TCGCTTTGAGTTCAA GCCGCGCG TCAA CGTGCGGC TGGATTACGGCGTGG STY3949 3817167 - 3818306 + | hypothetical protein TERM 5076 3818912 - 3818923 + G 71 -5.8 -4.3739 | TGGTACGGTTTCGAG TCCG TTCG CGGA TTTTCTGAGGGAGTA STY3950 3818303 - 3819430 + | hypothetical protein torS 3822270 - 3819535 - | hybrid sensory histidine kinase TorS TERM 5077 3819651 - 3819683 + g 84 -6.1 -5.04601 | overlap 3819652 3819653 CCCGACAGGCTTCGG TTGCCTGCGTCATCC CCA GGCTGGCGCAGCCGC TTTTTAATTTATGCG TERM 5078 3819652 - 3819682 + g 74 -9.6 -3.61676 | overlap 3819651 3819653 CCGACAGGCTTCGGT TGCCTGCGTCATCC CCA GGCTGGCGCAGCCG CTTTTTAATTTATGC TERM 5079 3820542 - 3820519 - G 74 -7.4 -4.08767 | gap 1, opp_overlap 3820520 CTGATCGTCGCAAAA CGTGCGCAGCA CTA TGCTGC-CGCG ATCGGTAAATTTCGC TERM 5080 3821451 - 3821467 + g 73 -5.1 -4.64861 | overlap 3821438 TACGAAACAGGGTAA CCAGTGT CGT GTACTGG TTTATTTTCCCCAGC TERM 5081 3822416 - 3822405 - g 71 -7.2 -3.97368 | TCTCGAATGTAGAAA CGGC GTCA GCCG AAACCGGGTTGCTAC torT 3822350 - 3823390 + | periplasmic sensory protein associated with the TorRS two-component regulatory system TERM 5082 3824263 - 3824283 + F 70 -9.7 -3.09327 | TCATTGTCGGGATTG TGATCGGCG TTG CGCTGATCG TGTTACCTCACGTCG TERM 5083 3826084 - 3826066 - g 71 -4.5 -4.61231 | TGATATGGTGAAAAA CCAGCAG GCAAA CTGGTGG TGCCCGGATCACGAT TERM 5084 3827588 - 3827539 - g 91 -14.3 -3.14132 | gap 1, opp_overlap 3827565 GCCGGTCTTTATTAA CCCACAGGATGCCAGCGCGCGCGG GAT CCGCA-ACGGTGACATCGTGCGGG TATTCAATGCACGCG torA 3825362 - 3827914 + | trimethylamine-N-oxide reductase precursor TERM 5085 3828034 - 3828012 - g 86 -14.9 -2.94293 | overlap 3828009 3828014 3828025 3828026 GGGTTAATACAATTA CAGTCCGCG GAAAT CGCGGACTG GCTGGCGCTGTTAAA TERM 5086 3828032 - 3828014 - g 76 -11.7 -3.02147 | overlap 3828012 3828009 3828025 3828026 GTTAATACAATTACA GTCCGCG GAAAT CGCGGAC TGGCTGGCGCTGTTA torD 3827907 - 3828539 + | chaperone protein TorD TERM 5087 3829685 - 3829675 - g 82 -5.4 -5.09426 | CCGAATTCGAAAAAA CGTT GAT AACG CCGGATTCCGCTTTT TERM 5088 3829741 - 3829727 - g 74 -7.1 -4.3467 | ACGTGGAGATGAAAA TGCGC TGACC GCGCA ACAGAAACACGGTTA yhjA 3828729 - 3830129 + | cytochrome c peroxidase TERM 5089 3830298 - 3830256 - g 75 -6 -4.56775 | opp_overlap 3830264 ACGGCGCCGGAAAAA CCACCCTGCTGCGCCTGC TGACCGG GCTGGCGCGCCCGGACGG CGGGGAGGTGTACTG TERM 5090 3830409 - 3830394 - g 78 -6 -4.83169 | opp_overlap 3830405 3830407, overlap 3830396 AGCCGGGGATAAAAA CCCGCC TGAC GGCGCG GGAGAACCTGCACTT TERM 5091 3830405 - 3830422 + G 71 -4.7 -4.56775 | opp_overlap 3830396 3830394, overlap 3830407 AAAACCCGCCTGACG GCGCGGG AGAA CCTGCAC TTTTTCCACCCCGGT ccmA2 3830135 - 3830752 + | cytochrome c biogenesis protein CcmA ccmB2 3830752 - 3831408 + | heme exporter protein B2 TERM 5092 3831559 - 3831579 + G 83 -10.3 -4.05788 | GGCATCATTGTGCTG GCCACGGGC TGG GTCCGGGGC TTTGGTTTCGCCCCG TERM 5093 3832044 - 3832083 + G 83 -12.8 -3.25304 | gap 1, overlap 3832035 3832045 GCAGCTGAGTATCGA CCCGGCGATGCGCTCGCCG CTG CGCTGGGC-CATCGCCGGC TTCCTGCTGCTCTTT TERM 5094 3832045 - 3832082 + G 89 -16.3 -2.54459 | gap 1, overlap 3832044 3832035 CAGCTGAGTATCGAC CCGGCGATGCGCTCGCCG CTG CGCTGGGC-CATCGCCGG CTTCCTGCTGCTCTT ccmC2 3831451 - 3832197 + | heme exporter protein C2 TERM 5095 3832212 - 3832222 + G 76 -3.2 -5.03314 | AGTCCGGCATTTTCA TCGT GGA GCGA TTTTTTCGCCATGGG TERM 5096 3832236 - 3832247 + G 100 -7.2 -5.38047 | GATTTTTTCGCCATG GGCG GGTA CGCC TTTTTTGTCTGGCTG ccmD2 3832194 - 3832406 + | heme exporter protein D2 ccmE2 3832403 - 3832882 + | cytochrome c-type biogenesis protein CcmE ccmF2 3832879 - 3834810 + | cytochrome c-type biogenesis protein F2 dsbE2 3834807 - 3835364 + | thiol:disulfide interchange protein TERM 5097 3835744 - 3835790 + G 100 -15.6 -3.53012 | overlap 3835768 CGTCGCCCGGACGCG CCGGCGGGTGCGCCTGCGCCGG GAG CCGCTGCCGGCGGACACCCCGG TTTGCGGCGCGCGCG TERM 5098 3836147 - 3836137 - g 77 -8.2 -4.11216 | TCTGGACCCGGAAAA CCGC GAT GCGG CGCTGGGCTACGCGG ccmH2 3835361 - 3836404 + | cytochrome c-type biogenesis protein H2 TERM 5099 3837311 - 3837339 + G 71 -10.9 -3.30701 | overlap 3837313 ATCAACAATGCCATC GCCGCCGTTGGGC GTA GTTCAGCGGCGTC TTACCTTTACTCACC TERM 5100 3837313 - 3837337 + G 78 -12.1 -3.21807 | overlap 3837311 CAACAATGCCATCGC CGCCGTTGGGC GTA GTTCAGCGGCG TCTTACCTTTACTCA TERM 5101 3837413 - 3837428 + G 78 -6.1 -4.72272 | opp_overlap 3837408 ACGCAGTAATCCGCA GGCGA CGGCGA TCGCC TTTTTGATGCGGGAC TERM 5102 3837652 - 3837666 + G 76 -3.4 -5.0133 | opp_overlap 3837645 3837644, overlap 3837646 ACGACAACCCGCCGT CTGCGG ACG CCGTCG TTTTTTCACCGGATG TERM 5103 3837743 - 3837714 - g 95 -15.1 -3.6707 | ATGGAAGAGGTGAAA GGTTTCCGTCAGC TATG GGTGACGGAAACC GGGCGATAAATCAGG yidR 3836526 - 3837752 + | putative ATP/GTP-binding protein STY3968 3838086 - 3837754 - | hypothetical protein hslT 3838396 - 3838809 + | heat shock protein IbpA TERM 5104 3838818 - 3838834 + F 74 -11.5 -2.80113 | TAACTGATTCCGTCG GGTCGCG TTG CGCGGCC TGTCATCCCATGCTC TERM 5105 3838910 - 3838893 - f 76 -4.9 -4.74103 | gap 1 GTGTGAAGGTAAAAA CTCGCTTC TTA GAAG-GAG AAATGATTATGCGTA TERM 5106 3839056 - 3839037 - g 79 -2.8 -5.17054 | overlap 3839038 3839041 ATAACATCGAAAAAA GCGACGAT AACC ATTATCGC ATTACCTTAGCGTTA hslS 3838919 - 3839347 + | heat shock chaperone IbpB TERM 5107 3839363 - 3839384 + F 100 -17.3 -5.24129 | TAAGCTCCTTGCCTT GCCCCGCCA GAGA TGGCGGGGC TTTTTTGTGCCACGA TERM 5108 3840662 - 3840636 - g 70 -2.9 -4.73388 | overlap 3840638 AACGCGCAGCAAAAA CTCCAGCAG GTGCAGATG CTGCCGGTG TTTATCGGCATCGGA TERM 5109 3841159 - 3841182 + G 76 -3.2 -5.02074 | gap 1, overlap 3841162 TGTTCCTGCGTATTA TCAC-GCCA CAACTGC TGGCGGTGA TTTTTTGGGGAATGG yidE 3839541 - 3841202 + | hypothetical protein TERM 5110 3842208 - 3842220 + G 71 -4.8 -4.57569 | GTAATTTGATGGATG TCGC GCATA GCGA TTTTTCCGAAACTCA yidG 3841982 - 3842344 + | hypothetical protein TERM 5111 3842766 - 3842778 + G 76 -3.3 -5.1101 | AAATCAGCTTTGCGA GGGCT ACC AGACC TTTTTTAACTACTCC yidF 3842341 - 3842871 + | hypothetical protein TERM 5112 3842929 - 3842889 - T 70 -9 -3.30771 | gap 1, opp_overlap 3842890 3842890 3842906, overlap 3842890 TCACAGGCCTGATAA GCGTAGCGCCATCAGGC GATGGCGT GCCGGATGGCGCTGC-C GTCTTTCCGGCACTA TERM 5113 3842890 - 3842929 + T 76 -12.1 -2.60813 | opp_overlap 3842889 3842890, overlap 3842890 3842906 CACAGGCCTGATAAG CGTAGCGCCATCAGGCG ATGGCG TGCCGGATGGCGCTGCC GTCTTTCCGGCACTA TERM 5114 3842890 - 3842930 + T 82 -11.9 -3.35046 | gap 1, opp_overlap 3842889 3842890, overlap 3842890 3842906 CACAGGCCTGATAAG C-GTAGCGCCATCAGGCG ATGGCG TGCCGGATGGCGCTGCCG TCTTTCCGGCACTAA dsdA 3844275 - 3842953 - | D-serine dehydratase dsdX 3845630 - 3844293 - | permease DsdX TERM 5115 3844943 - 3844962 + g 70 -7 -4.07687 | opp_overlap 3844938 CGGTAAACAGCGTTG CGCCCAGC GACG GCAGGGTG TTTTCGGCACGCACT TERM 5116 3845540 - 3845521 - G 75 -6.4 -4.55295 | GCGCCGACAAAGAAA CTGGCG AGCAGTAA CGCCAG GAAGGGGTGGAATTT TERM 5117 3846535 - 3846552 + G 74 -11.3 -3.19936 | opp_overlap 3846534 3846533 ATTTTGCGGTAAATT TGCCGGA TTCA TCCGGCA TTGGCTTCGATCGTT dsdC 3845856 - 3846779 + | DNA-binding transcriptional regulator DsdC TERM 5118 3847471 - 3847453 - gT 72 -8.8 -3.53343 | overlap 3847441 AACTGCCGGCGCAAA GCCAGAAC TAT GTACTGGC GGAGTGGCACATCTT TERM 5119 3847667 - 3847651 - gT 72 -2.2 -4.8667 | GAGAGTCGATAAAAA TGACGC CGATC GCTTCA CAGTTCGCGTTTGCC TERM 5120 3847728 - 3847710 - gT 76 -3.1 -5.0538 | overlap 3847711 TGCGAGCTGAAAAAA GCGCATA TTCCG TATGCGA TAAACGCGGACACTC TERM 5121 3847845 - 3847825 - gT 100 -15.4 -3.66178 | CGCCGGAATGTGAAA CGCCCGGC AAAAA GCCGGGCG AGGGGAATGTTAAAC emrD 3849039 - 3847855 - | multidrug resistance protein D STY3980 3846843 - 3847928 + | hypothetical protein TERM 5122 3848126 - 3848116 - Gf 74 -2.4 -5.06414 | GGCGCCGAAGAAAAA CAGC GCA GCGG GGATGAGTAGCGTCC TERM 5123 3849208 - 3849189 - fH 88 -7.8 -4.92385 | overlap 3849190 GATATGTAAACAAAA GCGGCAAC AAAT GTTGCCGA GAATGTGTTACGTCT TERM 5124 3849207 - 3849190 - fH 82 -11.3 -3.54346 | overlap 3849189 ATATGTAAACAAAAG CGGCAAC AAAT GTTGCCG AGAATGTGTTACGTC TERM 5125 3849276 - 3849262 - fH 76 -7.8 -4.3014 | ACAGACGGAGTAAAA TCGCCC CGA GGGCAA TCCCGCCCGCCGCCA TERM 5126 3849790 - 3849772 - fH 72 -10.2 -2.76721 | overlap 3849763 3849764 ACAGAACGCTAATGA GCGCCACC AGC AGCGGCGC GGTGCCGCGCATAAG TERM 5127 3850172 - 3850151 - fH 100 -17.3 -3.69354 | opp_overlap 3850151 3850163 GCGGATAAGGTGAAA GGGGAGCGG TTGC CCGCTCCCC TTCGGTGCGGCTTGA TERM 5128 3850151 - 3850172 + FH 100 -17.3 -3.06831 | opp_overlap 3850151, overlap 3850163 GCGGATAAGGTGAAA GGGGAGCGG TTGC CCGCTCCCC TTCGGTGCGGCTTGA TERM 5129 3850604 - 3850623 + FH 80 -12.2 -2.99188 | opp_overlap 3850591 3850590 3850602 3850601, overlap 3850591 3850600 3850594 TTCGCGCCGAAATTG CGCGTTCT GCAC AGAACGCG TATACTTCTGCTGTT TERM 5130 3850689 - 3850704 + FH 100 -10.4 -5.79595 | opp_overlap 3850689 ATTACGCTGTAAGAA CCTCGC TTCG GCGAGG TTTTTTGTTTTCAGG TERM 5131 3850704 - 3850689 - fH 79 -10.4 -3.62775 | opp_overlap 3850689 ATTACGCTGTAAGAA CCTCGC TTCG GCGAGG TTTTTTGTTTTCAGG ivbL 3850918 - 3851016 + | ilvB operon leader peptide TERM 5132 3851043 - 3851067 + F 100 -10.7 -5.63517 | gap 1, opp_overlap 3851043 CACACGATTCCAAAA CCCCGC-CGG CGCAAA CCGGGCGGGG TTTTTTGTTTAAGAC TERM 5133 3851067 - 3851043 - f 89 -11.4 -4.16279 | gap 1, opp_overlap 3851043 CACACGATTCCAAAA CCCCGC-CGGC GCAA ACCGGGCGGGG TTTTTTGTTTAAGAC ilvB 3851123 - 3852811 + | acetolactate synthase catalytic subunit ilvN 3852815 - 3853105 + | acetolactate synthase 1 regulatory subunit STY3988 3853892 - 3853107 - | DeoR family transcriptional regulator TERM 5134 3853378 - 3853348 - G 74 -7.6 -4.14243 | opp_overlap 3853348 CAGCTCACGCCAAAA TGTTCATGTACGCC GCT GGCGGAAATAAACA CTTTGCGCGGATTAA TERM 5135 3854147 - 3854162 + H 70 -4.8 -4.39889 | opp_overlap 3854146 CAAATGATACGGAAG TAACAT GATA ATGTTA TTTTAATATCATTGT TERM 5136 3854471 - 3854461 - g 80 -5.4 -4.88067 | ACGTATGTAGAAAAA GTAC CGT GTAC CAGCAGCGGCGTAGC TERM 5137 3854477 - 3854491 + G 74 -7 -4.25104 | overlap 3854478 TACCGTGTACCAGCA GCGGCG TAG CGCCGA TTTTCGTCAACGCCA TERM 5138 3855066 - 3855028 - g 81 -3.6 -5.14563 | opp_overlap 3855059 GCCGCCATGAAAAAA GCCGTCCTCTTTGCCGCT TTC AGCGTCACCGGGAAAGGC ACCCAATCCTCTTAT STY3989 3854206 - 3855126 + | putative carbohydrate kinase TERM 5139 3855204 - 3855171 - g 77 -3.9 -4.99861 | gap 1, opp_overlap 3855191, overlap 3855162 3855152 3855173 TATGAACGATAAAAA CATCGTTCAGATGCCC GAC GGGTATCTGAATAA-G ACACCTCTGTTCCAG TERM 5140 3855203 - 3855173 - g 74 -7.6 -4.11322 | opp_overlap 3855191, overlap 3855162 3855152 3855171 TGAACGATAAAAACA TCGTTCAGATGCCC GAC GGGTATCTGAATAA GACACCTCTGTTCCA TERM 5141 3855415 - 3855401 - g 89 -2.8 -5.52384 | TGGTCATTAAAAAAA CCAGTT ATA AAGTGG CGATACTTATCGGCC TERM 5142 3856470 - 3856438 - g 71 -7.6 -4.05788 | TGGCGCGAAAGCAAA GTGCGCGGCAACCT GGCTG AAGTCGCCGCGTCC TGAGGAGATCAACCA STY3990 3855157 - 3856473 + | permease STY3991 3856485 - 3857498 + | hypothetical protein TERM 5143 3857522 - 3857544 + F 76 -8.5 -4.09685 | GGCTTGAACACCCAG GCACTTATC GTTAA GGTAAGTGC TTTTGCCGGATGGCG uhpA 3857652 - 3858242 + | DNA-binding transcriptional activator UhpA uhpB 3858242 - 3859744 + | sensory histidine kinase UhpB TERM 5144 3860017 - 3860040 + G 75 -6.7 -4.38712 | TGTCTCCGGCATCGT TAGCGATCG CTCTAA CGCTCGCTA TTTTATGGGCATCGG TERM 5145 3860128 - 3860140 + G 75 -6.2 -4.58685 | CTTTGCGCTGCTATG GGCG CTGAA CGCC TTTTTCCAGGGGTTT TERM 5146 3860792 - 3860802 + G 70 -6.8 -4.15044 | GCCAGCTACGTCATG CAGG CGG CCTG TTTCTTCACCACCGG uhpC 3859754 - 3861082 + | regulatory protein UhpC TERM 5147 3862391 - 3862371 - g 76 -3.1 -5.08824 | overlap 3862372 TTCGTACCGAAAAAA GCCATCGGC GCT GCGGACGGT ATCAAGGGCACCTTC uhpT 3861225 - 3862616 + | sugar phosphate antiporter TERM 5148 3862640 - 3862658 + F 100 -13.1 -5.31456 | overlap 3862651 3862656 ATTTGGTAACGTTTT GCCCGGC TTAAC GCCGGGC TTTTTTATGCCTTGC TERM 5149 3863124 - 3863109 - g 83 -7.5 -4.56597 | CGCTTGCTGCAAAAA GCGCG TTTAGC CGCGC CGATCACCGACACAC yicN 3862803 - 3863261 + | hypothetical protein STY3997 3863614 - 3864357 + | GntR family transcriptional regulator STY3998 3864375 - 3864755 + | hypothetical protein STY3999 3864845 - 3865132 + | putative PTS system IIB component TERM 5150 3865262 - 3865289 + G 93 -4.7 -5.52986 | TATGTCCTGGGATTT GGCCCAACGGT TTTATT GCCGCTGGTCC TTTTTTTCCTGGCAT STY4000 3865208 - 3866566 + | putative PTS system IIC component STY4001 3866559 - 3868043 + | putative carbohydrate kinase TERM 5151 3868582 - 3868563 - f 87 -10.8 -4.13945 | opp_overlap 3868561 AGGCTGACTGCAAAA CTGAACCT GAGA AGGTTCAG CGCTTTGTTGAGGAG TERM 5152 3869010 - 3868991 - g 74 -2.2 -5.01497 | gap 1 ATGATTAGACAAAAA GTACGCGTT ATG AACA-GTAC GGGGCTTCATGCGCG STY4004 3868976 - 3869245 + | putative PTS system phosphocarrier protein STY4005 3869659 - 3869336 - | putative DNA-binding protein TERM 5153 3869621 - 3869641 + g 84 -9.1 -4.35327 | CGCGCTATGAATCGC TTCAAAGGC AGG GCTTTTGAA TTTAGTTTTTGCTGA TERM 5154 3870037 - 3870057 + H 72 -4.7 -4.67038 | opp_overlap 3870026, overlap 3870026 TAAAGTATAGCACCA GGTGATACA CTA TGTCTTACC TTTTGGTTTTACACG TERM 5155 3870700 - 3870710 + G 74 -2.4 -5.02476 | overlap 3870697 TTAGTGATCGCCGCG CCGC TGG GCAG TTTTTTGGGCGGTAT nepI 3870217 - 3871410 + | ribonucleoside transporter STY4009 3872852 - 3871470 - | putative glycosyl hydrolase TERM 5156 3871498 - 3871516 + g 84 -3 -5.42259 | TTATGCTCTGCGGTG GCGGCAAA CCA TTCTCCGC TTTTTTTCACCGTGC STY4010 3873251 - 3872958 - | putative secreted protein TERM 5157 3873931 - 3873958 + H 73 -10.5 -2.94144 | opp_overlap 3873909 3873931, overlap 3873928 3873933 TTTCGCCTGTGAACA GGCGAGCGGCG CTATCC CGCCGCTGGTC TACTTTAACTGCGCG TERM 5158 3873933 - 3873956 + H 70 -9.5 -3.02324 | opp_overlap 3873909 3873931, overlap 3873931 3873928 TCGCCTGTGAACAGG CGAGCGGCG CTATCC CGCCGCTGG TCTACTTTAACTGCG TERM 5159 3874625 - 3874604 - H 75 -10.1 -3.59979 | overlap 3874619 3874621 3874622 CTGTTTGACGGTAAA GCGCGGCTA AATA TAGACGCGC GCACGCTGCCCGCAT TERM 5160 3875158 - 3875171 + H 71 -9.5 -3.14218 | overlap 3875157 3875156 GCGTATCGATGCCAG CCCCG ACTG CGGGG TCATTTTGATCGCTC TERM 5161 3875775 - 3875785 + H 77 -6.8 -4.46112 | overlap 3875765 3875760 TCCAGCCGGGGCTGC CGGA TAT TCCG TTTATTTCGCTGGAA TERM 5162 3875892 - 3875902 + H 74 -8.2 -3.86015 | overlap 3875888 TGGAGATGGAGCGCA GCGC GAT GCGC TTTATCAGCGCGCTA TERM 5163 3876255 - 3876281 + H 73 -11.5 -2.5638 | overlap 3876254 3876253 ATAGCTAATCCTTTT ACTGGCGGGGC TTCGC GCCTCGCCAGA CCTTTCTTCTTCCTC STY4013 3876469 - 3876894 + | putative PTS system protein TERM 5164 3877243 - 3877253 + G 87 -8.2 -4.62302 | opp_overlap 3877243 CGGCGGCGGGCCAAA CCGC AAG GCGG TTTTTCAGAATATTA STY4014 3876905 - 3877390 + | putative PTS system protein STY4015 3877536 - 3878285 + | putative PTS system protein TERM 5165 3878596 - 3878586 - g 87 -2.4 -5.64873 | opp_overlap 3878593, overlap 3878587 TGGAAGAACAAAAAA CGCG CGG CGAG CCGATTAACGACTCG STY4016 3878285 - 3879142 + | putative PTS system protein TERM 5166 3879211 - 3879184 - g 73 -5.6 -4.56775 | gap 1, opp_overlap 3879184, overlap 3879208 ACTGGGGTTGAAAAA GGTCATTAACGCC TGC GGCAA-AATGACC ATTCTGGGCGTCTCA STY4017 3879146 - 3880255 + | putative transferase TERM 5167 3880489 - 3880473 - g 71 -7.9 -3.99324 | GCGCAGTACTACAAA GCGGCGA TGA TTGCCGC CCATACTCACCCGGC TERM 5168 3880873 - 3880858 - g 74 -10.4 -3.56092 | opp_overlap 3880865 3880866 GTATTATCCTGCAAA CCTGCC TGGA GGCAGG CGTGCCGCGCGTCAT STY4018 3880242 - 3880985 + | hypothetical protein TERM 5169 3881060 - 3881002 - f 75 -11 -3.03243 | opp_overlap 3880996 ATTTATCGCCGAAGA GCGCTACGTTTACCTGGCCTACAGAT GACGTGT ATTTGTAGGCCCGGTTAGCGTTACGC TACCGGGCGATAATG STY4020 3881221 - 3882162 + | hypothetical protein yicL 3883107 - 3882205 - | hypothetical protein TERM 5170 3883217 - 3883232 + H 85 -3.3 -5.60993 | AGACGAGCCTGTTAT TGACA TAATAT TGTCA TTTTTTTGTCACGGG TERM 5171 3883737 - 3883757 + G 100 -8.2 -5.19328 | opp_overlap 3883733, overlap 3883738 TACGCACTAATGCGC TGGTGGCG ACAGG CGCCGCCG TTTTTATTCTGAGCT TERM 5172 3883738 - 3883756 + G 74 -9.5 -3.70512 | opp_overlap 3883733, overlap 3883737 ACGCACTAATGCGCT GGTGGCG ACAGG CGCCGCC GTTTTTATTCTGAGC mgtC 3883613 - 3884308 + | hypothetical protein TERM 5173 3884405 - 3884388 - f 77 -3.4 -5.18371 | GTCGATAAAATAAAA CCCACT CAAAAT AGTGAG TAAGCAATAACCTTT TERM 5174 3884986 - 3884971 - g 73 -5.4 -4.57837 | opp_overlap 3884983 ACAGGCGCTGAAAAA GATGGT GCGC ACCACC GCCACGATGTTGCGT mgtB 3884528 - 3887254 + | magnesium transport ATPase, P-type 2 TERM 5175 3888347 - 3888327 - T 100 -14.1 -4.61199 | opp_overlap 3888327, overlap 3888341 AGGCGATAGATAAAA TAGCCCCAT TAA ATGGGGCTA TTTAGCCGCTTCAGG TERM 5176 3888327 - 3888347 + T 93 -14.1 -3.57561 | opp_overlap 3888327 3888341 AGGCGATAGATAAAA TAGCCCCAT TAA ATGGGGCTA TTTAGCCGCTTCAGG slsA 3889050 - 3888370 - | hypothetical protein TERM 5177 3889077 - 3889093 + H 70 -9.5 -3.08015 | overlap 3889068 TGTTGTTGCCTTTCA CTGATAG TCA CTATCAG TGTTAAAGTCATTAA TERM 5178 3890412 - 3890423 + H 76 -4.4 -4.9218 | CAGCTGGCAAACCGT TCCT GATA AGGA TTTTTATGATCGCTA TERM 5179 3890508 - 3890498 - H 72 -8.2 -3.77177 | opp_overlap 3890498 3890502 ATGAAGATATCGAAA GCGG TAG CCGC TTTGCAGGCTATAAG TERM 5180 3891130 - 3891148 + G 77 -4.5 -4.9725 | overlap 3891132 TGGCTTTATGTTCAC CATCGGG AAACG CCCGATA TTTTTCTGTACACAT TERM 5181 3891132 - 3891146 + G 70 -7.1 -4.11141 | overlap 3891130 GCTTTATGTTCACCA TCGGG AAACG CCCGA TATTTTTCTGTACAC fidL 3890702 - 3891166 + | hypothetical protein TERM 5182 3891222 - 3891248 + T 76 -9.4 -3.68569 | opp_overlap 3891226, overlap 3891224 3891226 AAAGCGCTTCCGGGT AAAAGCCGCTGA AGA TCAGCGGCTCTG TTGTTACCTGAATCA TERM 5183 3891224 - 3891246 + T 82 -12 -3.42256 | opp_overlap 3891226, overlap 3891222 3891226 AGCGCTTCCGGGTAA AAGCCGCTGA AGA TCAGCGGCTC TGTTGTTACCTGAAT TERM 5184 3891226 - 3891244 + T 90 -14.6 -3.27902 | opp_overlap 3891226, overlap 3891224 3891222 CGCTTCCGGGTAAAA GCCGCTGA AGA TCAGCGGC TCTGTTGTTACCTGA TERM 5185 3891244 - 3891226 - T 100 -14.6 -4.07568 | opp_overlap 3891226 3891224 3891222 CGCTTCCGGGTAAAA GCCGCTGA AGA TCAGCGGC TCTGTTGTTACCTGA TERM 5186 3892462 - 3892476 + T 78 -5.7 -4.84529 | opp_overlap 3892461 TCCGGCTCAATGTAG CTGGT CAGAT ACCAG TTTTTACCTTTCTGC TERM 5187 3893458 - 3893480 + T 72 -4.8 -4.58395 | opp_overlap 3893463, overlap 3893460 GTAACTATATGTGCA CACGATTGCC GAC GACAATCGTA TTTTTGGCACGTGAC TERM 5188 3893460 - 3893478 + T 71 -7.4 -3.90762 | opp_overlap 3893463, overlap 3893458 AACTATATGTGCACA CGATTGCC GAC GACAATCG TATTTTTGGCACGTG rmbA 3894822 - 3894205 - | hypothetical protein TERM 5189 3895612 - 3895593 - R 74 -8.6 -3.89822 | opp_overlap 3895593 3895591 CAGTCACTTCAGAAA TATCCGCC TCCT GGCAGATA TCTTTAACCGCTCGT TERM 5190 3895942 - 3895931 - R 76 -4.4 -5.01845 | GATAACAATGAAAAA TCAG GTAA CTGA GAAACTATTCAGTGT STY4036 3897523 - 3896540 - | putative DNA-binding protein TERM 5191 3897332 - 3897362 + g 95 -11.2 -4.64676 | overlap 3897333 3897334 3897336 ATTTTTCCCATCACT GGCAGTTGTTCGGT AAA ACCGAACAACTGAA TTTTCTTCAAGCTCG TERM 5192 3897333 - 3897361 + g 95 -14.7 -3.38324 | overlap 3897332 3897334 3897336 TTTTTCCCATCACTG GCAGTTGTTCGGT AAA ACCGAACAACTGA ATTTTCTTCAAGCTC TERM 5193 3897334 - 3897360 + g 95 -18.2 -2.62512 | overlap 3897333 3897332 3897336 TTTTCCCATCACTGG CAGTTGTTCGGT AAA ACCGAACAACTG AATTTTCTTCAAGCT TERM 5194 3897336 - 3897358 + g 83 -15 -2.84841 | overlap 3897334 3897333 3897332 TTCCCATCACTGGCA GTTGTTCGGT AAA ACCGAACAAC TGAATTTTCTTCAAG TERM 5195 3898546 - 3898510 - R 100 -15.3 -4.52589 | gap 1, opp_overlap 3898515 3898516, overlap 3898516 TTGGTCCATATAAAA GCA-AACGCGCCTGCC GGGAGT GGCAGGCGCATTATGC GGTGAAATAAAGGTG TERM 5196 3898515 - 3898540 + r 85 -12.5 -3.33162 | opp_overlap 3898510 3898516, overlap 3898516 CCATATAAAAGCAAA CGCGCCTGCCG GGAG TGGCAGGCGCA TTATGCGGTGAAATA TERM 5197 3898516 - 3898539 + r 90 -16 -2.59683 | opp_overlap 3898510 3898516, overlap 3898515 CATATAAAAGCAAAC GCGCCTGCCG GGAG TGGCAGGCGC ATTATGCGGTGAAAT TERM 5198 3898539 - 3898516 - R 100 -15.3 -3.17012 | opp_overlap 3898516 3898515, overlap 3898510 CATATAAAAGCAAAC GCGCCTGCC GGGAGT GGCAGGCGC ATTATGCGGTGAAAT STY4039 3899235 - 3898639 - | hypothetical protein TERM 5199 3898816 - 3898806 - G 78 -6.8 -4.57073 | opp_overlap 3898806 TATGTTCTTCAAAAA GCTG TTC CAGC TCTTCCCAATGATTA TERM 5200 3899587 - 3899574 - H 78 -6.7 -4.65916 | GTGACGGTAATAAAA GCGAT AATC ATCGC TGTAAATAATCTCTT STY4041 3899797 - 3900141 + | hypothetical protein yicJ 3900832 - 3902214 + | putative transporter STY4044 3902226 - 3904544 + | alpha-xylosidase YicI yicH 3906356 - 3904647 - | hypothetical protein TERM 5201 3905186 - 3905215 + g 81 -12.9 -3.02511 | overlap 3905185 CGATCACCAGATTGC GGCTGGCGCTGAA TTTT TTCAGCGTCAGGC TGTTCAGCCAGTCGG TERM 5202 3906440 - 3906473 + r 78 -5.8 -4.7657 | opp_overlap 3906447, overlap 3906441 3906442 ATGGTGAAAGAGCGT TACAGCAGCGGCGA ATCGTG TCGCCGCCGCAGGG TTTTTACGGTTTTTC TERM 5203 3906442 - 3906471 + r 71 -10.6 -2.64962 | opp_overlap 3906447, overlap 3906441 3906440 GGTGAAAGAGCGTTA CAGCAGCGGCGA ATCGTG TCGCCGCCGCAG GGTTTTTACGGTTTT TERM 5204 3906466 - 3906447 - R 71 -10.7 -2.63479 | opp_overlap 3906442 3906441 3906440 AAGAGCGTTACAGCA GCGGCGA ATCGTG TCGCCGC CGCAGGGTTTTTACG STY4046 3907868 - 3906477 - | putative purine permease TERM 5205 3906979 - 3907012 + g 75 -12.5 -2.62184 | CCGGATACCGGCTGC TCGGAGACATCAGAG GTGG CGGTGATGTCTCCGA TGGTCTCCAGCGACG TERM 5206 3907447 - 3907433 - G 71 -7.8 -3.9398 | GTAGAATGCGAGAAA GCACCA TCT CGGTGC AGCTTGCCAGCATCA gltS 3908095 - 3909300 + | glutamate permease recG 3911417 - 3909336 - | ATP-dependent DNA helicase RecG TERM 5207 3910588 - 3910613 + g 74 -10.3 -3.53012 | overlap 3910589 CGTTCGATCTCTGCT ACCACCCGCGC CTGC GCGCTGGTGGG TTTAAACGGCAACGA TERM 5208 3910589 - 3910612 + g 79 -13.8 -2.71712 | overlap 3910588 GTTCGATCTCTGCTA CCACCCGCGC CTGC GCGCTGGTGG GTTTAAACGGCAACG TERM 5209 3910671 - 3910718 + g 78 -13.4 -2.57564 | overlap 3910663 3910670 GTTGGTACTTAGCGG CTGAGTGTGGTAGCGCTGCGCG CCTG CGCGAAGCGCCAGCATACTGAG GTTATGCGCCAGTAG trmH 3912112 - 3911423 - | tRNA guanosine-2'-O-methyltransferase TERM 5210 3911566 - 3911552 - G 71 -10 -3.59583 | opp_overlap 3911552 ATAACCACCCTCAAA CAGCAG GCG CTGCTG TTCATCTTCCGGCAA TERM 5211 3911552 - 3911566 + g 70 -10 -3.36273 | opp_overlap 3911552 ATAACCACCCTCAAA CAGCAG GCG CTGCTG TTCATCTTCCGGCAA spoT 3914228 - 3912117 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 5212 3912581 - 3912609 + g 83 -7.3 -4.56775 | TCGATTGCGCAACGG TCGGCACCACGGC TTC GCCTTGCTGCAGA TTTTTCGCGACCACT TERM 5213 3913028 - 3913006 - G 84 -9 -4.23758 | overlap 3913007 ACTGCATAGGCAAAA TCCACCGGCG TAG CGCCAGCGGG CAGTTCGACAATGCG TERM 5214 3913027 - 3913007 - G 81 -12.5 -3.13773 | overlap 3913006 CTGCATAGGCAAAAT CCACCGGCG TAG CGCCAGCGG GCAGTTCGACAATGC rpoZ 3914522 - 3914247 - | DNA-directed RNA polymerase subunit omega TERM 5215 3914357 - 3914386 + g 72 -3.5 -4.71401 | gap 1, overlap 3914359 3914360 3914381 TGTTAATCAGACCTT CT-TCGATTTCGCG CAG CGCGATAACGGTAG TTTTATCGTTTTCTT gmk 3915200 - 3914577 - | guanylate kinase TERM 5216 3914857 - 3914840 - G 85 -2.6 -5.45802 | opp_overlap 3914838 3914840 GCGGCAAAATAAAAA TGCTGC GTGCTT GCGGCA TCTTTTCGCGAATTT TERM 5217 3915145 - 3915133 - G 80 -9.1 -4.15044 | opp_overlap 3915133 3915129 TGGGTTTTTAATAAA GCCTG AAT CAGGC TGGATTTACCCGCGC TERM 5218 3916343 - 3916317 - R 74 -8.6 -3.92542 | CGCATGGCTAAAGAA CCCGCGTCACAA TAC TGGCGACCCGGG CAGGGCGACTGGCTG STY4056 3917755 - 3917138 - | hypothetical protein STY4057 3918887 - 3918003 - | putative beta-lactamase TERM 5219 3919157 - 3919188 + G 73 -5.8 -4.50761 | gap 1 TTGCTACGCCTTATG CGCAGGCGCT-GCGT GAC AAGTTGGCGCCTGTG TTTGTTTCGCTTAAT TERM 5220 3919736 - 3919774 + G 75 -3.8 -4.8667 | gap 1, overlap 3919737 3919738 ATAAGCGCGGTCTTT TTGT-CCTGCCGCTTGC CGGGGA GCAGGCGGAAGGCGCTA TTTTTATGCAGTATC STY4058 3918961 - 3919863 + | putative regulatory protein STY4059 3920776 - 3919913 - | hypothetical protein TERM 5221 3920053 - 3920071 + g 85 -2.4 -5.45652 | gap 1, overlap 3920056 GCATCATGAAGTCCA GACGGCG ACCTAC CGCC-TC TTTTTTCTTCAGAAT rph 3920902 - 3921618 + | ribonuclease PH TERM 5222 3921625 - 3921642 + F 100 -11.3 -5.96219 | GAAAATTGATTTTAA GGCGACT GAAA AGTCGCC TTTTTTTTGTCCGTA TERM 5223 3921828 - 3921848 + G 76 -5.3 -4.82901 | opp_overlap 3921821 GTTTAATACCGGGCG CGACCTGGC GTT GTTAGGCCG TTTTTATGCCGAAGC pyrE 3921697 - 3922338 + | orotate phosphoribosyltransferase TERM 5224 3922440 - 3922472 + T 71 -10.5 -2.67588 | opp_overlap 3922460, overlap 3922439 3922437 CTGCGCGGCAATGAG CGGCCAGCGGGCG TCGAAAT CGTCCGTTGGGCG GTATTTAAATTCGCT slmA 3923012 - 3922416 - | nucleoid occlusion protein TERM 5225 3922526 - 3922545 + g 74 -3.4 -4.88736 | opp_overlap 3922521 3922529, overlap 3922527 CTTCACAGAAGGCTA ACAGCTGG CTTG CCAGCAGA TTTTTATCCGTCGTG TERM 5226 3923087 - 3923067 - R 70 -9 -3.33492 | GCACCCACGCTATAA CCGCAAAC TCAGC GCTTGCGG CAGTATTATGACGTT dut 3923575 - 3923120 - | deoxyuridine 5'-triphosphate nucleotidohydrolase dfp 3924776 - 3923556 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 5227 3923838 - 3923856 + g 71 -4.5 -4.67168 | gap 1, opp_overlap 3923811, overlap 3923855 ACTGAGTGCGGCCAC CCCGG-CG ACAA TGTCCGGG TTTTTGACCATTTTT radC 3924952 - 3925617 + | DNA repair protein RadC TERM 5228 3925630 - 3925643 + F 72 -6.7 -4.2074 | overlap 3925627 TAAGATTCTTTGCGC GATCC ATCG GGATC TTTGTCTGTTCGGGA rpmB 3925835 - 3926071 + | 50S ribosomal protein L28 rpmG 3926092 - 3926259 + | 50S ribosomal protein L33 TERM 5229 3926277 - 3926305 + F 86 -9 -4.38712 | gap 1, opp_overlap 3926277 3926283, overlap 3926283 CTCGCTTTGATGTAA CAAAAA-CCTCGC TTCG GCGGGGTTTTTTG TTTTCTGGCCGTCCC TERM 5230 3926298 - 3926283 - f 82 -6 -5.10461 | opp_overlap 3926277 3926283, overlap 3926277 TTGATGTAACAAAAA CCTCGC TTCG GCGGGG TTTTTTGTTTTCTGG TERM 5231 3926283 - 3926298 + F 100 -8.2 -5.86976 | opp_overlap 3926283 3926277, overlap 3926277 TTGATGTAACAAAAA CCTCGC TTCG GCGGGG TTTTTTGTTTTCTGG mutM 3926357 - 3927166 + | formamidopyrimidine-DNA glycosylase coaD 3927673 - 3927194 - | phosphopantetheine adenylyltransferase kdtA 3928959 - 3927682 - | 3-deoxy-D-manno-octulosonic-acid transferase waaQ 3929404 - 3930438 + | lipopolysaccharide core biosynthesis protein TERM 5232 3931188 - 3931201 + G 78 -2.3 -5.24129 | opp_overlap 3931180, overlap 3931189 GAAAGAAGCGGCGTC GGCAC GAAT GTGCA TTTTTTCTCCGGACG waaG 3930435 - 3931559 + | lipopolysaccharide core biosynthesis protein waaP 3931552 - 3932349 + | lipopolysaccharide core biosynthesis protein STY4074 3932390 - 3932773 + | hypothetical protein TERM 5233 3932779 - 3932763 - f 79 -2.3 -5.51402 | overlap 3932765 ATATACTTAAAAAAA GGTTTAT CTA ATAAATC ACTCTTGTTATCCTA STY4075 3932797 - 3933465 + | hypothetical protein waaB 3933525 - 3934604 + | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltrans ferase waaI 3934610 - 3935623 + | lipopolysaccharide 1,3-galactosyltransferase TERM 5234 3936213 - 3936231 + G 77 -4.6 -4.93365 | opp_overlap 3936213 ATTATGGAAAGAGAA TGCCTT AACTGAA AAGGCA TTTTTACTTCTGGCA waaJ 3935641 - 3936651 + | lipopolysaccharide 1,2-glucosyltransferase waaY 3936674 - 3937372 + | lipopolysaccharide core biosynthesis protein TERM 5235 3937871 - 3937899 + G 75 -6 -4.57341 | ACTGTTTAATTATTC GCTCCTTTTATC GCCGA GAAAAAGGGGGC TTTTTAAAGAAAATT waaZ 3937522 - 3938331 + | lipopolysaccharide core biosynthesis protein TERM 5236 3938353 - 3938371 + F 78 -5.3 -5.01422 | gap 1 GATAAATCATTATTT TGCGTTGC TTCG GCA-CGCA TTTCTTTTTCTATAA waaK 3938430 - 3939575 + | lipopolysaccharide 1,2-N-acetylglucosaminetransferase TERM 5237 3939596 - 3939627 + T 100 -10.2 -5.51046 | opp_overlap 3939597, overlap 3939597 TCCTGATGATGGAAA ACGCGCTGATAC CGTAATAA GTATCAGCGCGC TTTTTTATCTATTTC TERM 5238 3939597 - 3939626 + T 100 -13.7 -3.88187 | opp_overlap 3939597, overlap 3939596 CCTGATGATGGAAAA CGCGCTGATAC CGTAATAA GTATCAGCGCG CTTTTTTATCTATTT TERM 5239 3939626 - 3939597 - T 100 -14.4 -4.21194 | opp_overlap 3939597 3939596 CCTGATGATGGAAAA CGCGCTGATACC GTAATA AGTATCAGCGCG CTTTTTTATCTATTT waaL 3940846 - 3939632 - | hypothetical protein waaC 3941839 - 3940886 - | ADP-heptose:LPS heptosyl transferase I waaF 3942885 - 3941839 - | ADP-heptose:LPS heptosyltransferase II TERM 5240 3942396 - 3942356 - G 95 -14.2 -3.3197 | opp_overlap 3942368, overlap 3942360 3942368 AGAGGACGTTCAGAA GATAGCGAAAAATCGCTG TACAT CAGCGATTTTTCACCCTC GCTAACCTGGAGCTG TERM 5241 3942392 - 3942360 - G 100 -15.8 -3.17622 | opp_overlap 3942368, overlap 3942356 3942368 GACGTTCAGAAGATA GCGAAAAATCGCTG TACAT CAGCGATTTTTCAC CCTCGCTAACCTGGA TERM 5242 3942384 - 3942368 - G 90 -8 -4.74453 | opp_overlap 3942368, overlap 3942360 3942356 GAAGATAGCGAAAAA TCGCTG TACAT CAGCGA TTTTTCACCCTCGCT TERM 5243 3942368 - 3942384 + g 87 -8 -4.60041 | opp_overlap 3942368 3942360 3942356 GAAGATAGCGAAAAA TCGCTG TACAT CAGCGA TTTTTCACCCTCGCT TERM 5244 3942787 - 3942754 - G 84 -12.5 -3.34962 | gap 1, opp_overlap 3942753 3942757, overlap 3942757 CGGCATACGCGATAA CAACG-GACGGCACCA GGC TGGCGCCATCACGTCG ATTATCGCCTGGGGA TERM 5245 3942784 - 3942757 - G 80 -10.6 -3.81447 | gap 1, opp_overlap 3942753 3942757, overlap 3942754 CATACGCGATAACAA CG-GACGGCACCA GGC TGGCGCCATCACG TCGATTATCGCCTGG rfaD 3943820 - 3942888 - | ADP-L-glycero-D-mannoheptose-6-epimerase kbl 3944023 - 3945219 + | 2-amino-3-ketobutyrate coenzyme A ligase TERM 5246 3945406 - 3945389 - g 76 -2.7 -5.01732 | AATGGTCGCAAAAAA CCATC CCGGTTCC GATGG TCGTGGGGCATGAAT tdh 3945229 - 3946254 + | L-threonine 3-dehydrogenase TERM 5247 3946369 - 3946347 - f 73 -11.4 -2.71144 | opp_overlap 3946351, overlap 3946351 GACTGGGGTGAACGA CAAATCTGCC GGG AGCAGATTTG AACGTCGCGTGCGAC TERM 5248 3946511 - 3946531 + F 100 -9 -5.4505 | opp_overlap 3946511 CGTTTCATCGTAAAA GGTTGGTG TCATT CGCCAACC TTTTTTGTTAGGGAA TERM 5249 3946531 - 3946511 - f 71 -6.8 -4.13767 | opp_overlap 3946511 CGTTTCATCGTAAAA GGTTGGTG TCATT CGCCAACC TTTTTTGTTAGGGAA STY4088 3946749 - 3947783 + | putative glycosyl transferase STY4089 3948732 - 3947770 - | hypothetical protein TERM 5250 3948600 - 3948610 + g 74 -6.8 -4.2349 | overlap 3948585 TGTTTGGCGGCAGCG CCAG AAC CTGG TTTTCCGTGTGCGGG STY4090 3950019 - 3948736 - | hypothetical protein TERM 5251 3948821 - 3948798 - G 73 -5.9 -4.43877 | opp_overlap 3948820 GAATTTCGAAATAAA GCGAAGGTC TGCCCT GACCGCCGC TACTGCCCACAAGGG TERM 5252 3949947 - 3949921 - G 100 -14.5 -3.81022 | overlap 3949909 AAAGGCGCACAACAA TACGCCAGCGC TAAGT ACGCTGGCGTA GAACAAAGGCCTGAC STY4091 3951573 - 3950029 - | phosphoglyceromutase TERM 5253 3952081 - 3952067 - g 83 -10 -4.08485 | CCGAGCGAAATCAAA GCCAAC AAT GTTGGC GAACTGGAAAAGCAC STY4092 3951821 - 3952252 + | putative secreted protein grxC 3952338 - 3952589 + | glutaredoxin 3 secB 3952633 - 3953100 + | preprotein translocase subunit SecB TERM 5254 3953102 - 3953086 - f 86 -10.9 -3.69283 | overlap 3953078 GAAGGTACTGAAGAA CATCAGG ATG CCTGATG AACCAAAGTAATGCG TERM 5255 3953808 - 3953833 + G 71 -9.7 -3.56821 | gap 1, overlap 3953799 GCGCTTGGTGCCGAT CCCGCCA-CCTT TAT GGGGATGGCGGG TTTAGGCGATCTGGT gpsA 3953100 - 3954119 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 5256 3954143 - 3954172 + F 90 -10.1 -4.39426 | gap 1, opp_overlap 3954143, overlap 3954147 AACTGTTTGCATAAA CGACCCAACCCG CACAGAA CGGGTTGG-TCG TTTTCTGCCCGTCTG TERM 5257 3954172 - 3954143 - f 84 -10.8 -3.86194 | gap 1, opp_overlap 3954143 3954147 AACTGTTTGCATAAA CGACCCAACCCGC ACAGA ACGGGTTGG-TCG TTTTCTGCCCGTCTG TERM 5258 3954147 - 3954169 + F 74 -10.6 -3.17598 | opp_overlap 3954143, overlap 3954143 GTTTGCATAAACGAC CCAACCCG CACAGAA CGGGTTGG TCGTTTTCTGCCCGT cysE 3954197 - 3955018 + | serine acetyltransferase TERM 5259 3955074 - 3955041 - T 100 -8.3 -5.32944 | gap 2 GGTACAACTAAAAAA CGCTGTTCCGATGGA GTGCAA TCC--CGGAACAGCG GAGCGAAGAATTCGC TERM 5260 3956477 - 3956459 - T 79 -11.7 -3.1352 | overlap 3956455 CTGTAAGGTAAGAGA GGCGGGA CGGAT TCCCGCC AGTCGGGTTAAGGGC STY4099 3957681 - 3956485 - | putative racemase TERM 5261 3958523 - 3958510 - g 72 -3.8 -4.72272 | TTTTCCCATGAAAAA GTCG GGCAGG CGAC GGGGGAGTATCTTCT STY4100 3957949 - 3959004 + | LacI family transcriptional regulator yibK 3959545 - 3959072 - | putative tRNA/rRNA methyltransferase YibK lldD 3960800 - 3959610 - | L-lactate dehydrogenase lctR 3961573 - 3960797 - | DNA-binding transcriptional repressor LldR lldP 3963225 - 3961570 - | L-lactate permease TERM 5262 3963496 - 3963474 - R 100 -16.4 -4.30448 | opp_overlap 3963474 AAAGGGAAGTGAAAA GGCAATGGCA TTA TGCCATTGCC TTTGATGTCGGGAGT TERM 5263 3963474 - 3963496 + r 100 -16.4 -3.83205 | opp_overlap 3963474 AAAGGGAAGTGAAAA GGCAATGGCA TTA TGCCATTGCC TTTGATGTCGGGAGT sapB 3966847 - 3963524 - | putative autotransporter STY4106 3967602 - 3966919 - | putative lipoprotein TERM 5264 3967019 - 3967029 + g 83 -8.2 -4.43012 | TACTTAAGATTATTG GGCG ATA CGCC TTTTAATGTTAGCGT TERM 5265 3967114 - 3967143 + g 81 -3.5 -5.14563 | gap 1, overlap 3967114 GAGCAGGAGTTGTCG CC-AGCGAGGCAGA TCT TTTGCCTCGGAAGG TTTTTTCGTACCCCA yibL 3968452 - 3968090 - | hypothetical protein STY4108 3968743 - 3968949 + | hypothetical protein mtlR 3969549 - 3968959 - | mannitol repressor protein mtlD 3970694 - 3969546 - | mannitol-1-phosphate 5-dehydrogenase TERM 5266 3969627 - 3969638 + g 86 -7.2 -4.68593 | overlap 3969619 AATTTGCGCCAGCGC GGCC TGCG GGCC TTTTTCGGTAATCAG TERM 5267 3970313 - 3970327 + g 74 -10 -3.63744 | overlap 3970311 GGCCTTTCAGCTGCG TGGTGC CGC GCACCA TATTTTCGCAGGCGA mtlA 3972831 - 3970915 - | mannitol-specific enzyme II of phosphotransferase system TERM 5268 3973070 - 3973086 + H 70 -5.1 -4.54449 | AACGAATCTCATTTT TAGCCCT TAA AAGGCTA TTTTATGTGAGATAT TERM 5269 3973093 - 3973108 + H 75 -3.2 -5.14626 | overlap 3973092 AAAAGGCTATTTTAT GTGAGA TATT TCACAC TTTTATTTTGGTGCT STY4112 3973306 - 3973914 + | putative glutathione S-transferase TERM 5270 3974988 - 3974976 - g 74 -10.5 -3.54543 | AGCCATCCGCTGAAA CGCGC TCT GCGCG CGGATAAAATGACGC selA 3974013 - 3975404 + | selenocysteine synthase TERM 5271 3977048 - 3977027 - g 74 -7.3 -4.13945 | ACCGCGATCGTAAAA GATCGGTAC TATC GTAACGATC GGATTGTCGCTTTCG selB 3975401 - 3977251 + | selenocysteinyl-tRNA-specific translation factor TERM 5272 3977335 - 3977309 - T 88 -8.1 -4.82901 | opp_overlap 3977309 GTTGCTTTATAAAAA GCACATCAG CAAATGAAC CTGATGTGC TTTTTATTTTTCTGG TERM 5273 3977309 - 3977335 + T 100 -8.1 -5.69262 | opp_overlap 3977309 GTTGCTTTATAAAAA GCACATCAG CAAATGAAC CTGATGTGC TTTTTATTTTTCTGG STY4115 3978417 - 3977536 - | putative sugar kinase TERM 5274 3979146 - 3979127 - g 74 -7.8 -4.14392 | TGGCAAGCTGGAAAA TGGCGCCA GCGC TGGCGGCA GGTAACTGCGTGGTG aldB 3978586 - 3980124 + | aldehyde dehydrogenase B STY4117 3982197 - 3980242 - | hypothetical protein TERM 5275 3982755 - 3982725 - g 74 -10.3 -3.60296 | opp_overlap 3982724 3982722 3982725 CATTTTGAGGTCAAA GCGCCGGACAGCG ACCCG CGCTGGCTGACGC ATCTTTCCGTGCCGC TERM 5276 3982797 - 3982809 + G 75 -6.2 -4.60924 | overlap 3982792 GTTGCCGATCCGCAG GCGC TGATT GCGC TTTTTCGCCAGTTTA TERM 5277 3982866 - 3982841 - g 71 -6 -4.33105 | opp_overlap 3982842, overlap 3982842 3982844 GAACGAGCAGGAAAA GCACCAGCGC AGTCCG GCGCTGGAGT TCATCGTGCTGCTGA STY4118 3982461 - 3983273 + | putative transcriptional regulator sgbE 3984129 - 3983434 - | L-ribulose-5-phosphate 4-epimerase yiaR 3984983 - 3984123 - | putative L-xylulose 5-phosphate 3-epimerase sgbH 3985638 - 3984976 - | 3-keto-L-gulonate-6-phosphate decarboxylase lyxK 3987131 - 3985635 - | putative L-xylulose kinase TERM 5278 3986154 - 3986123 - G 100 -2.9 -5.94713 | gap 1, opp_overlap 3986124 3986141 3986142 3986144 3986149 ACGGGAGAAAAAAAA GGTCGCTA-CCGGC TTTCG GCAGGCTGGCAACC GCCTGGTTGATCTCG TERM 5279 3986685 - 3986637 - G 91 -17 -2.71144 | opp_overlap 3986649, overlap 3986649 CACGCCGGTTAAGCA CCA-GCGCAGATAGTCATGCGTCA TCA TGACGC-TGCCTATCTGCGCGTAG CGCTGCGGCTCATTC TERM 5280 3987746 - 3987766 + H 70 -4.7 -4.38712 | gap 1 ATTTTTTCAGTTCAT CGC-CGAC TTTACC GTCGAGCG TTTTATGCGCATGCG STY4124 3988152 - 3988427 + | insertion element IS1 protein InsA insB 3988346 - 3988849 + | insertion element IS1 protein InsB yiaN 3990186 - 3988909 - | hypothetical protein yiaM 3990662 - 3990189 - | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM STY4128 3991733 - 3990801 - | hypothetical protein TERM 5281 3991500 - 3991480 - G 71 -6.1 -4.2803 | overlap 3991481 GACGCTAATCCAAAA CCGCCGT TTTCGCT ACGGCGA CGCATGGTTTCCATT TERM 5282 3991580 - 3991563 - G 70 -9.1 -3.62597 | opp_overlap 3991567 TGTATGGCGCAATAA CCACTCG TCGC CGAGCGG GTGAAGATGTTCAAG TERM 5283 3991612 - 3991600 - G 70 -9.1 -3.67052 | AGATGTTCAAGACAA GGCTG CTC CAGCC CCCGGATATCCGGAG yiaL 3992221 - 3991757 - | hypothetical protein STY4130 3993231 - 3992233 - | 2,3-diketo-L-gulonate reductase yiaJ 3993461 - 3994261 + | putative transcriptional regulator STY4132 3994378 - 3994851 + | putative electron-transport protein avtA 3996138 - 3994888 - | valine--pyruvate transaminase TERM 5284 3995948 - 3995960 + g 80 -10.5 -3.91858 | opp_overlap 3995936 TTACAAAGCGCATCA GCGGC TTT GCCGC TTTCTACCATCTCTG malS 3998339 - 3996312 - | periplasmic alpha-amylase precursor bax 3998655 - 3999479 + | hypothetical protein xylR 4000718 - 3999540 - | xylose operon regulatory protein xylA 4001081 - 4002403 + | xylose isomerase TERM 5285 4003283 - 4003297 + G 82 -11.4 -3.91897 | TCGGGCGTCTATTTT GCCGTC AGC GACGGC TTTCTGAGTAAACCG xylB 4002503 - 4003957 + | xylulose kinase TERM 5286 4003990 - 4003965 - f 82 -12 -3.45054 | opp_overlap 4003965 TGTCATAAGTCAGAA TGCCTTTCAG TTTTGG CTGAAAGGCA TTTCCCGTAAATATT TERM 5287 4003965 - 4003990 + F 88 -12.7 -3.61922 | opp_overlap 4003965 TGTCATAAGTCAGAA TGCCTTTCAGT TTTG GCTGAAAGGCA TTTCCCGTAAATATT yiaB 4004132 - 4004485 + | hypothetical protein TERM 5288 4004500 - 4004483 - f 71 -9.9 -3.22774 | opp_overlap 4004476 4004483 TACAGTGATGATGAA TGATGGC CGGA GCCATCA TTGTCGTTTAGCTAA TERM 5289 4004483 - 4004500 + F 75 -9.9 -3.61609 | opp_overlap 4004483, overlap 4004476 TACAGTGATGATGAA TGATGGC CGGA GCCATCA TTGTCGTTTAGCTAA TERM 5290 4005296 - 4005280 - f 79 -4.4 -5.1615 | gap 1, overlap 4005281 GCAATACGTAAAAAA TGCCGCG GTTG CGCG-CA GCGCTCGCCAAAAAA TERM 5291 4005922 - 4005946 + G 81 -7.1 -4.7889 | TAAAGAGAGTTTTGT CTGCTCTTTTG ATG CAGATGGGCAG TTTTTACATCTTTCT STY4142 4005668 - 4005970 + | putative lipoprotein glyQ 4006109 - 4007020 + | glycyl-tRNA synthetase subunit alpha glyS 4007030 - 4009099 + | glycyl-tRNA synthetase subunit beta TERM 5292 4009144 - 4009117 - f 77 -7.1 -4.46112 | opp_overlap 4009123 4009143, overlap 4009123 GTTCAGTTAAATAAA CAAAAACCTGC TCTCGG GCAGGTTTTTT TATAACATAAATAGT TERM 5293 4009138 - 4009123 - f 91 -6.1 -5.5454 | opp_overlap 4009123, overlap 4009117 TTAAATAAACAAAAA CCTGC TCTCGG GCAGG TTTTTTTATAACATA TERM 5294 4009123 - 4009138 + F 91 -6.8 -5.626 | opp_overlap 4009123 4009117 TTAAATAAACAAAAA CCTGCT CTCG GGCAGG TTTTTTTATAACATA TERM 5295 4009453 - 4009431 - f 73 -11.4 -2.71144 | opp_overlap 4009435, overlap 4009435 GACTGGGGTGAACGA CAAATCTGCC GGG AGCAGATTTG AACGTCGCGTGCGAC yafP 4010135 - 4010602 + | putative acetyltransferase STY4150 4010780 - 4011067 + | hypothetical protein STY4151 4011055 - 4011540 + | putative acetyltransferase TERM 5296 4011748 - 4011726 - T 93 -7 -5.72622 | opp_overlap 4011726 GCCAGAAACAAAAAA GAGCCCATGT ATT AAATGGACTC TTTCGCTGATGCCTC TERM 5297 4011877 - 4011905 + T 100 -8.9 -5.44721 | opp_overlap 4011887, overlap 4011878 TGTTGGCGTTTTATA GGCCCGATAAC CCATTAT GTTATCGGGCA TTTTTTTAACGTAAT TERM 5298 4011878 - 4011904 + T 95 -12.4 -3.85748 | opp_overlap 4011887, overlap 4011877 GTTGGCGTTTTATAG GCCCGATAAC CCATTAT GTTATCGGGC ATTTTTTTAACGTAA STY4152 4012450 - 4011911 - | hypothetical protein TERM 5299 4012601 - 4012582 - R 100 -11.4 -6.09888 | TTGGAATAAAAAAAA TCCCCGCC ATCA GGCAGGGA TTCAAAATTCTGAGC cspA 4012838 - 4012626 - | major cold shock protein STY4154 4013458 - 4013051 - | putative transcriptional regulator TERM 5300 4013641 - 4013663 + H 79 -4.1 -5.252 | gap 1 AAATATTACATCCCC CGCTGGAAAG CTTT CTTGCC-GCG TTTTTTATCGCAGTG TERM 5301 4014343 - 4014371 + G 70 -9.6 -3.34517 | gap 1, overlap 4014341 CGTGCCGGCAGATGC TTTGCAGCCGCTG ATCC CGGCGGC-GCAGA TCTTTACGCAGCAGT yiaF 4013855 - 4014565 + | hypothetical protein yiaE 4015589 - 4014615 - | 2-hydroxyacid dehydrogenase TERM 5302 4015380 - 4015399 + g 82 -5.6 -5.00616 | gap 1, overlap 4015381 CACCGAGATGGTCGA CGCCGCGCG TAG CGC-CGGCA TTTTTTCCAGCAGCG TERM 5303 4015633 - 4015611 - R 77 -6.9 -4.54727 | CTCCGTAAATCAAAA GGTAAGCGC GGCAT GCGCCAACC GGAACAGGCTTATTA yiaD 4016470 - 4015808 - | putative outer membrane lipoprotein bisC 4016623 - 4018956 + | biotin sulfoxide reductase yiaC 4019365 - 4018925 - | hypothetical protein tag 4019924 - 4019343 - | 3-methyl-adenine DNA glycosylase I TERM 5304 4019602 - 4019584 - G 78 -6.6 -4.59027 | opp_overlap 4019585, overlap 4019585 AATGACCAGACAAAA TCGGCGAA AGA CTCGCCGT TTTGCTCCATCGCAA TERM 5305 4019601 - 4019585 - G 70 -10.1 -3.34332 | opp_overlap 4019585, overlap 4019584 ATGACCAGACAAAAT CGGCGAA AGA CTCGCCG TTTTGCTCCATCGCA TERM 5306 4019585 - 4019601 + g 84 -9.4 -4.2828 | opp_overlap 4019585 4019584 ATGACCAGACAAAAT CGGCGA AAGAC TCGCCG TTTTGCTCCATCGCA TERM 5307 4020123 - 4020146 + G 100 -8 -5.28176 | overlap 4020102 4020102 4020126 CGGACATTGCGTTGT CTGGCGGGCC TTAT GGCCTGCTCG TTTTTTATCAATACC TERM 5308 4020126 - 4020143 + G 73 -10.5 -3.45403 | overlap 4020102 4020102 4020123 ACATTGCGTTGTCTG GCGGGCC TTAT GGCCTGC TCGTTTTTTATCAAT yhjY 4020081 - 4020785 + | hypothetical protein yhjW 4021016 - 4022647 + | phosphoethanolamine transferase TERM 5309 4022825 - 4022843 + T 100 -14.6 -5.4251 | opp_overlap 4022825 GACCAAATTCAGAAA CCCTGCTC AGC GAGCAGGG TTTTTTGTATCTGAA TERM 5310 4022843 - 4022825 - T 100 -14.6 -4.03204 | opp_overlap 4022825 GACCAAATTCAGAAA CCCTGCTC AGC GAGCAGGG TTTTTTGTATCTGAA STY4163 4022962 - 4022831 - | hypothetical protein STY4164 4023966 - 4022959 - | LacI family transcriptional regulator TERM 5311 4023646 - 4023657 + g 75 -5.8 -4.56775 | opp_overlap 4023645 4023646 TGGTGGCACCAGAAT CAGC GCAT GCTG TTTTTCCAGCGCCAT TERM 5312 4024241 - 4024228 - g 71 -9.5 -3.53012 | opp_overlap 4024228 4024227 TTTTTGCGCCGCAAA CCGCC GAAG GGCGG GTTTACCTGGTGGAC STY4165 4024116 - 4025240 + | hypothetical protein TERM 5313 4025244 - 4025269 + F 100 -11.1 -5.69023 | opp_overlap 4025242 4025241 4025245, overlap 4025247 TGGTTGAAATAATGC AGACCGCCAGC CCGC GCTGGCGGTTA TTTTTTTGATGTTTT TERM 5314 4025268 - 4025245 - f 78 -12.4 -2.71101 | opp_overlap 4025244 4025247, overlap 4025242 4025241 GGTTGAAATAATGCA GACCGCCAGC CCGC GCTGGCGGTT ATTTTTTTGATGTTT TERM 5315 4025247 - 4025266 + F 100 -15 -4.86226 | opp_overlap 4025245 4025242 4025241, overlap 4025244 TTGAAATAATGCAGA CCGCCAGC CCGC GCTGGCGG TTATTTTTTTGATGT TERM 5316 4025995 - 4026006 + F 78 -5.8 -4.84527 | CACAGCTTTTGCCGT TCGG CTGG CCGA TTTTTGATCTCTCCG TERM 5317 4026637 - 4026657 + F 95 -12.6 -4.00411 | GTTTTTGTGATCGCG GTAGGCCG CACGA CGGCCTAC TTATTTACAATTTTG TERM 5318 4027406 - 4027383 - g 84 -8.8 -4.27316 | opp_overlap 4027382 4027399 TGGTTGAATTCAAAA CCGGCACCAC GGAA GTGATCCCGG GTCTTGCTGAGAAGT TERM 5319 4027570 - 4027558 - g 74 -3.3 -4.84359 | TGACCGGCAGAAAAA CGAGC AGA ACCCG TACCATAAAGTGTCT TERM 5320 4028032 - 4028020 - g 90 -6.3 -5.23765 | overlap 4028026 GAAAGAAGATAAAAA CATCA ACC TGATG GAGCAGGCCGGTCTG dppA 4027178 - 4028785 + | periplasmic dipeptide transport protein precursor TERM 5321 4028804 - 4028792 - f 80 -6.9 -4.56133 | GTCGAATAATTAAAA GAGCG CTG CGCCC CGGTGTTGTGTAGGC dppB 4028942 - 4029961 + | dipeptide transporter permease DppB TERM 5322 4030453 - 4030477 + G 71 -8.5 -3.87815 | CTTCGGCCCCTCCAT CGGCAACGCTG CGC TGGCGTTGACG TTTGTGGCGCTGCCG TERM 5323 4030673 - 4030684 + G 74 -7.2 -4.1822 | GCCATTCTCGATATG GCCG CCCT CGGC TTTCTTGGCATGGGC dppC 4029971 - 4030873 + | dipeptide transporter dppD 4030884 - 4031867 + | dipeptide transporter ATP-binding subunit dppF 4031864 - 4032877 + | dipeptide transporter ATP-binding subunit yhjV 4034485 - 4033187 - | putative amino acid permease TERM 5324 4034079 - 4034061 - G 75 -11 -3.37755 | opp_overlap 4034060 4034059, overlap 4034059 ATAGACTGCGAAAGA TCGGCCTC AGT AAGGCCGA AGGTTTTGATATAGG TERM 5325 4034538 - 4034504 - H 71 -7.2 -4.07568 | opp_overlap 4034532 4034534 GCCCCCTGCCCAAAA TATACGCAGCTCTCTC ATA AAGAATGCTGCCTATA ACCAGGCTATAGTGC TERM 5326 4034972 - 4034999 + H 73 -11.2 -2.57244 | overlap 4034968 CCCGGTGAGGCGCAA TGTTGCGGGGGC TTGA GCCCCGGCGGCA TAGGTTGCTGGATAG TERM 5327 4035063 - 4035021 - H 100 -12.7 -4.60797 | gap 1, opp_overlap 4035020 GCTGGATAGAGAAAA CCCCCG-CACGTTGACTGGT ATAA ACCTGGCAACCTGACGGGGG CTAACTTGAACCCAA STY4175 4035104 - 4035235 + | hypothetical protein TERM 5328 4035276 - 4035315 + T 100 -16.4 -3.73775 | opp_overlap 4035271, overlap 4035284 AATGGCAACATGCGC CCGAGCCAGGCCGCAGGG GAAA CCTTGCGGCCTTTTTCGG TTTACTGCGGGTAAG TERM 5329 4035284 - 4035307 + T 100 -16 -4.82855 | opp_overlap 4035271, overlap 4035276 CATGCGCCCGAGCCA GGCCGCAGGG GAAA CCTTGCGGCC TTTTTCGGTTTACTG yhjU 4036996 - 4035317 - | hypothetical protein TERM 5330 4035755 - 4035777 + g 81 -8.5 -4.25104 | gap 1, overlap 4035751 ATCGAACAGTTTCTG CGCGCGGATT TTAT AATCCGC-CG TTTTGCTGACGCCAG TERM 5331 4035931 - 4035980 + g 88 -11.3 -4.10007 | opp_overlap 4035907 4035931, overlap 4035932 CGTCGAATGACAGCA GGGCGGTTGGCAGGCCGGACTGG TTCA TCAGTTCGCTCTGCATACCGCCG TTTTCGCGAACTTCT TERM 5332 4035932 - 4035979 + g 91 -14.8 -3.05522 | opp_overlap 4035907 4035931, overlap 4035931 GTCGAATGACAGCAG GGCGGTTGGCAGGCCGGACTGG TTCA TCAGTTCGCTCTGCATACCGCC GTTTTCGCGAACTTC STY4177 4037184 - 4036993 - | hypothetical protein yhjS 4038752 - 4037181 - | hypothetical protein TERM 5333 4037484 - 4037466 - G 76 -3.1 -5.01535 | gap 1, overlap 4037469 GCAGAATGATAAAAA CAGC-ACC AGAC GGTTGCCG CCGATGGTCATAATA TERM 5334 4038165 - 4038176 + g 91 -7.2 -4.8622 | overlap 4038160 4038158 CAATAACTGCTGTCG GGCG CTGA CGCC TTTTTCGTTACACCA TERM 5335 4038465 - 4038482 + g 72 -2.6 -4.87665 | ACAAAGCAAATCGTG GGGCAA AGAGTA TAGCCC TTTTTCTGAATCCGG STY4179 4038997 - 4039200 + | hypothetical protein yhjQ 4039201 - 4039953 + | cell division protein TERM 5336 4040030 - 4040042 + G 74 -10.5 -3.53224 | GGGTTACCGCCGCCA CGGCG CGT CGCCG TTTAGCGCAGCGCTC TERM 5337 4041103 - 4041121 + G 77 -7.4 -4.30719 | AGAAACAGCTGGCGA TGATGCAG ACG CCGCATCA TTTCTTCTCCCCGGA TERM 5338 4041224 - 4041235 + G 75 -5.8 -4.65933 | opp_overlap 4041223 GGACGGTAACGATAT GTGG GATG CCAC TTTCTTTTGCGGATC bcsA 4039950 - 4042574 + | cellulose synthase catalytic subunit yhjN 4042585 - 4044885 + | cellulose synthase regulator protein TERM 5339 4045406 - 4045394 - g 80 -9.1 -4.09685 | TGCTACCTGGCAAAA TCGGC TTT GCCGA GGCGAATAGCTGGCG TERM 5340 4045737 - 4045725 - g 81 -6.9 -4.81083 | opp_overlap 4045731 GTTAACGATGAAAAA CGGCG TTC CACCG GAGAAAGTGGATGTC yhjM 4044889 - 4045998 + | endo-1,4-D-glucanase TERM 5341 4046632 - 4046604 - f 70 -9.6 -3.04894 | gap 1, opp_overlap 4046602, overlap 4046603 AACGCTCTGCAAAAT GCGCTGGCGCAAC TGTT GTT-CGCCAGCGG GCGGCGCGATGAGGG TERM 5342 4046710 - 4046664 - f 76 -8.1 -4.07568 | gap 2 TTCGCGGTGCTAAAA CAGATGGCGAAATCCA-G-TACG GGA CGCAGCGCGGCCTCCGCCATCTG GTACCAGCAGATAAA TERM 5343 4047922 - 4047906 - f 70 -10.8 -2.57344 | opp_overlap 4047906, overlap 4047905 CAGCGTGGCGATAAT GCGGCG GCCCG CGCCGC TTATGACGCCGTTCT TERM 5344 4047906 - 4047922 + F 77 -10.8 -3.30338 | opp_overlap 4047906 4047905 CAGCGTGGCGATAAT GCGGCG GCCCG CGCCGC TTATGACGCCGTTCT TERM 5345 4049723 - 4049763 + F 76 -2 -5.28983 | gap 1, overlap 4049731 4049746 CCGCTCGTTAACAAT TAAACA-GATGGCAATGGT TGCG GCCGTTGTCATGGTGTTTG TTTTTGTCTTTTGCA TERM 5346 4050412 - 4050434 + G 72 -12 -2.76261 | opp_overlap 4050412, overlap 4050411 AACGCGAGGAGCAAA CGGACAACGC GAT GCGTTTTCCG GTTTCCGAGTTGCCC TERM 5347 4050434 - 4050412 - g 86 -12 -3.79519 | opp_overlap 4050412 4050411 AACGCGAGGAGCAAA CGGACAACGC GAT GCGTTTTCCG GTTTCCGAGTTGCCC yhjK 4049730 - 4051703 + | putative phosphodiesterase dctA 4051861 - 4053147 + | C4-dicarboxylate transporter DctA TERM 5348 4053160 - 4053189 + F 75 -10 -3.59315 | overlap 4053162 TAATCTCGCCACTTA TGCCCGTAGTCC CTTCCA GGACTGCGGGTG TTTGCGCATAATTGA TERM 5349 4053162 - 4053187 + F 85 -12.6 -3.37259 | overlap 4053160 ATCTCGCCACTTATG CCCGTAGTCC CTTCCA GGACTGCGGG TGTTTGCGCATAATT TERM 5350 4053312 - 4053332 + F 78 -5.3 -5.06414 | TTTACGTCATATTCA GGCATCCCT GCC GGGGCTGTC TTTTTATTACCAGGA TERM 5351 4054528 - 4054503 - g 78 -6.1 -4.82901 | overlap 4054473 GGTGGCGCAGAAAAA TCTCGAATTGC AAAA GCTATTCGCGA CCTACGCGCGTACCG yhjJ 4053367 - 4054854 + | putative zinc-protease precursor kdgK 4055837 - 4054908 - | 2-dehydro-3-deoxygluconokinase TERM 5352 4055765 - 4055783 + g 73 -8.8 -3.86015 | opp_overlap 4055739 4055735, overlap 4055766 TGTCGCCGCCGAAGC CGCGCTGA ACA TCAGCGCC TTTCTGCGACAGCTC TERM 5353 4055766 - 4055782 + g 75 -12.3 -2.91395 | opp_overlap 4055739 4055735, overlap 4055765 GTCGCCGCCGAAGCC GCGCTGA ACA TCAGCGC CTTTCTGCGACAGCT TERM 5354 4056520 - 4056541 + G 74 -6.5 -4.32436 | CCTCGATGTGTGAGT TCGTCCCGC TGTG GCTGGATGA TTTTGGTACTGGTAT yhjH 4056066 - 4056833 + | EAL domain-containing protein TERM 5355 4058872 - 4058841 - g 95 -10.1 -4.70659 | gap 1, opp_overlap 4058844 CGGGACATTTAAAAA TCCGCAGGC-GGGC GTCAA GCCCGGCCCGCTGA TTGCGCGCGGCGCGG STY4193 4056943 - 4059003 + | hypothetical protein TERM 5356 4059040 - 4059012 - T 74 -11 -2.80464 | gap 1, opp_overlap 4059013, overlap 4059000 4059011 GCAGTAACGTGAAAC GTCGCGCCGGATG ACGC CATCCGGCGCC-C TATTACAACGCCTGA TERM 5357 4059013 - 4059040 + T 75 -11.2 -3.02144 | opp_overlap 4059000 4059012 4059011 CAGTAACGTGAAACG TCGCGCCGGATG ACGC CATCCGGCGCCC TATTACAACGCCTGA yhjE 4060365 - 4059043 - | metabolite transport protein TERM 5358 4059997 - 4059971 - G 74 -10 -3.64822 | AGTCCCTGACCGAAA CGCGCCAGCGCC AGC AGCAGCGGCGCG AAAATACCTATCGTC yhjD 4061744 - 4060716 - | hypothetical protein yhjC 4062719 - 4061817 - | LysR family transcriptional regulator TERM 5359 4063491 - 4063477 - g 71 -4.2 -4.64992 | overlap 4063478 4063479 GGCAAAAAATAGAAA GCGC GCCGGAT GCGC TGGTCATGCTGGATA yhjB 4063347 - 4063949 + | LuxR family transcriptional regulator STY4198 4064311 - 4063955 - | phage-like lysozyme TERM 5360 4064046 - 4064019 - G 100 -12.1 -5.38249 | overlap 4064041 ATTAATGATAAAAAA CGCTGATGTCC GATGCT GAACATCAGCG CAATAAGCGTTTCGC TERM 5361 4064563 - 4064553 - H 75 -3.2 -5.19998 | opp_overlap 4064554 4064557, overlap 4064557 ATAATTAAAAGAAAA CGAA GAT CTCG TCGCGGGATCGTCTT TERM 5362 4064554 - 4064576 + H 84 -8.4 -4.57073 | opp_overlap 4064553 4064557, overlap 4064557 TAATTAAAAGAAAAC GAAGATCTCG TCG CGGGATCGTC TTTTTAGGGAAGATA TERM 5363 4065144 - 4065167 + G 71 -9.6 -3.54424 | opp_overlap 4065144 4065143 4065141 4065147, overlap 4065147 AAACAGGGAGAAGAT CAACATGCGC TGGA GGGCATGTTG TTTAGCGAACTGGCG TERM 5364 4066161 - 4066140 - g 100 -5.9 -5.60689 | opp_overlap 4066140 GCAGACAATAAAAAA TGGCTGA AAATTCAG TCAGCCA TTTATGATGCGATTC STY4199 4064592 - 4066181 + | hypothetical protein treF 4067843 - 4066194 - | trehalase TERM 5365 4068836 - 4068825 - g 71 -5.8 -4.33819 | opp_overlap 4068821 4068825 4068833 ATGATTGATAACAAA GGAG AACT CTCC TGCGTTTCGCAACAG STY4201 4068168 - 4068887 + | gntR family regulatory protein TERM 5366 4068884 - 4068871 - f 72 -6.7 -4.36914 | opp_overlap 4068871 TTGTCGGCGATAAAA TACGG TTTA CCGTA TGATGTCAGCATTAC TERM 5367 4068921 - 4068945 + F 100 -11.5 -6.02546 | GAAGAGCAGGCTGAA TCGGGATCC AGATCGC GGATCCCGA TTTTTTTTGGTTTCC STY4202 4069063 - 4069917 + | putative phosphosugar-binding protein TERM 5368 4070058 - 4070046 - T 71 -10.5 -2.70932 | CCGCGTCGGCAATCA GCGCC GAT GGCGC AAGGACAGCCAGGGC TERM 5369 4070225 - 4070188 - T 74 -10.5 -3.29096 | opp_overlap 4070189, overlap 4070189 CGTATTAATCATGAA GGCCTGTGCGCCCACCC TCGA AGATGGGCGCACAAGAT ATTAACGCATGGTCA TERM 5370 4070224 - 4070189 - T 83 -14 -2.57136 | opp_overlap 4070189, overlap 4070188 GTATTAATCATGAAG GCCTGTGCGCCCACCC TCGA AGATGGGCGCACAAGA TATTAACGCATGGTC gor 4071579 - 4070227 - | glutathione reductase TERM 5371 4070859 - 4070869 + g 71 -4.6 -4.56775 | overlap 4070854 GTTCCAGAGTCAGAC TGCC GTC GGCG TTTTTCACCACCGCT STY4206 4072526 - 4071684 - | hypothetical protein TERM 5372 4071994 - 4072015 + g 73 -5.1 -4.58773 | CCCTCGCTGATGCCG CTGACTACC GCCT GGTAATCGG TTTTCATTTCATAAG TERM 5373 4072091 - 4072127 + g 75 -5.7 -4.59773 | overlap 4072103 TGGCTTTCAGTTGCT GATAGCCGTCAGCGCGT TCC ACGCGGGCGCGGTTGTC TTTTTGAAACTCCGC STY4207 4073138 - 4072647 - | hypothetical protein STY4208 4073368 - 4074021 + | hypothetical protein TERM 5374 4075131 - 4075117 - g 71 -4.2 -4.59773 | overlap 4075119 CCGCAGGGGGAAAAA GAGCTG GCC CAGCTG CGCGCCTTCGCCAAA TERM 5375 4075278 - 4075267 - g 83 -7.2 -4.64861 | opp_overlap 4075266 4075267 TTCCCGGAAAACAAA GCCG TGAA CGGC CTGTTTGAAGTGGTG prlC 4074184 - 4076226 + | oligopeptidase A TERM 5376 4076260 - 4076277 + G 74 -9.8 -3.7319 | opp_overlap 4076259 4076258 TTAATGGATGAAACG GGCGCC ACAGAC GGCGCC TTATCTGTTCTGGCT STY4210 4076233 - 4076991 + | putative methyltransferase STY4211 4078552 - 4077083 - | inner membrane transporter YhiP TERM 5377 4078289 - 4078309 + g 76 -10.3 -3.76224 | opp_overlap 4078289 4078288 AATCGCCAGCACAAT CGCGCCCAG GAC CAGGGTGCG TTTAGTCCCTAACAG TERM 5378 4078459 - 4078436 - G 77 -4.4 -4.8622 | overlap 4078439 TTGTTTAACGAAAAA GACCGCCAGG ATGC CCTGGACGCC GTAATAGCTAAATCG TERM 5379 4078764 - 4078781 + r 74 -8.3 -3.99374 | opp_overlap 4078764 GGGGGATAAACAAAA CGCCCAC ATAA GCGGGCG TTGTTGTTGATAGCC TERM 5380 4078781 - 4078764 - R 100 -10.5 -4.99043 | opp_overlap 4078764 GGGGGATAAACAAAA CGCCCAC ATAA GCGGGCG TTGTTGTTGATAGCC uspA 4079311 - 4078877 - | universal stress protein A uspB 4079699 - 4080034 + | universal stress protein UspB TERM 5381 4080065 - 4080044 - T 100 -13.7 -5.8187 | opp_overlap 4080041 4080044 CACTGAATAAAAAAA GCGGGCCAG TTTC CTGACCCGC TCGTATTAGATAAGC TERM 5382 4080044 - 4080065 + T 74 -11.5 -2.75992 | opp_overlap 4080044, overlap 4080041 CACTGAATAAAAAAA GCGGGCCAG TTTC CTGACCCGC TCGTATTAGATAAGC TERM 5383 4080135 - 4080167 + T 72 -8.4 -3.77219 | gap 1, overlap 4080136 GTCGTTTCATCCTGA CAGGCCGGATTAGCG ACAG CGCTA-TCCGGCCCA TTTGGCTTAAATAAT TERM 5384 4080136 - 4080166 + T 77 -11.9 -2.8585 | gap 1, overlap 4080135 TCGTTTCATCCTGAC AGGCCGGATTAGCG ACAG CGCTA-TCCGGCCC ATTTGGCTTAAATAA pitA 4081670 - 4080174 - | putative low-affinity inorganic phosphate transporter TERM 5385 4081040 - 4081056 + g 74 -2.1 -5.09204 | overlap 4081041 4081047 4081051 GGATCAGCGCGATAC GCGTCCA GAA TGGCGGC TTTTTCTTGCCGTCT TERM 5386 4081051 - 4081070 + g 74 -4.2 -4.68655 | overlap 4081041 4081040 4081047 ATACGCGTCCAGAAT GGCGGC TTTTTCTT GCCGTC TTTCTTTTCACGTTC TERM 5387 4081651 - 4081631 - G 75 -4 -4.95167 | gap 1 CAAGCAATAATAAAA GCCCGGTAT GTAA AT-CCAGGC CAGCAAACAAATGTA TERM 5388 4082191 - 4082201 + G 86 -6.8 -5.07053 | opp_overlap 4082190 4082191 CTGGCATGAGAAAAC GCTG GGA CAGC TTTTTTGCGATGATT TERM 5389 4082608 - 4082618 + G 77 -8.2 -4.17089 | CCATCGTGGGCTGTC CGGC CCC GCCG TTTTACAGATTTCCA STY4215 4081901 - 4083103 + | hypothetical protein STY4216 4083203 - 4083319 + | hypothetical protein TERM 5390 4083559 - 4083544 - T 74 -8.2 -3.95183 | opp_overlap 4083544 CCAGATACAGAATAA GGCCCC TGAC AGGGCC TTCTGGTAGTATGTA TERM 5391 4084338 - 4084320 - T 100 -9.6 -5.10163 | AATCGTAAAATAAAA CCAATGCT GAC AGCACTGG AGCCATGCAGACCAA STY4219 4085547 - 4084900 - | putative DNA-binding protein TERM 5392 4085554 - 4085581 + r 81 -8.4 -4.44667 | overlap 4085555 4085556 GTTTTTCATGGTTAA TCTGGTTGCCAC CTCA GTGGCAACCACC TTTGTTATTGACGAA TERM 5393 4085555 - 4085580 + r 79 -11.9 -3.26318 | overlap 4085554 4085556 TTTTTCATGGTTAAT CTGGTTGCCAC CTCA GTGGCAACCAC CTTTGTTATTGACGA TERM 5394 4085556 - 4085579 + r 90 -15.4 -2.55309 | overlap 4085555 4085554 TTTTCATGGTTAATC TGGTTGCCAC CTCA GTGGCAACCA CCTTTGTTATTGACG STY4220 4085966 - 4085586 - | putative regulatory protein STY4221 4087142 - 4085976 - | putative aminotransferase TERM 5395 4086555 - 4086568 + g 75 -6.7 -4.386 | opp_overlap 4086554 4086555 AATTTCGTCAGAAAT CAGGA TTGT TCCTG TTTTCTGGGCAATTG STY4222 4088450 - 4087158 - | hypothetical protein TERM 5396 4088419 - 4088387 - G 83 -7.7 -4.67755 | ACATCGATTTAAAAA TGGTCCCTCCTCCGA TTG CCAGAAGAATGACCA TCAACCATTTTTGAA TERM 5397 4088565 - 4088552 - H 74 -3.9 -5.02476 | opp_overlap 4088552 AGAGTGGGCAAAAAA GATAA AAAA TTATC TCTTCTAATTTAATA TERM 5398 4088655 - 4088671 + H 81 -5.3 -5.19879 | opp_overlap 4088666, overlap 4088648 4088657 ATTTACGGTTGTAAT TTTATAA AAA TTATAAA TTTTTATATTTCAGG TERM 5399 4088813 - 4088829 + H 70 -2.2 -5.00616 | ACGAATATTTGATGC CGTGGG CTGTA TCCATG TTTTTTAGCCGGGCC TERM 5400 4089113 - 4089124 + H 72 -3 -4.9445 | GCCTTAACGCTCGCT CAAT GGCC ATTG TTTTTCATTCCTTCT TERM 5401 4089583 - 4089571 - g 70 -9.1 -3.71645 | AACGCCAGAGTGAAA TGCGC GCC GCGCA GTCGGTCGTCAAACA TERM 5402 4090132 - 4090117 - g 74 -6.8 -4.23758 | overlap 4090118 AGTTCACACCCAAAA CCGTGG AAAC CCACGA TGAACGGCTGAAGCT TERM 5403 4090224 - 4090213 - g 74 -7.2 -4.1964 | opp_overlap 4090221 TGGAATATGTCAAAA CCGG TTTG CCGG GAATGGCCTGGGTTC STY4223 4089228 - 4090295 + | HlyD family secretion protein TERM 5404 4091188 - 4091201 + G 70 -3.1 -4.7629 | gap 1 TGTTAATTTCCGCAT TC-CGC GCG GCGAGA TTTTTGGCTTCCTCG STY4224 4090292 - 4093033 + | ABC transporter ATP-binding protein TERM 5405 4094233 - 4094256 + T 79 -10.2 -3.50555 | gap 1, opp_overlap 4094217 4094232, overlap 4094228 GCCGGGCAAGCGAAG CGCCCCCG-GC AAG GCGCTGGGGCG TTAGTCTTCTTTCGG nikR 4094658 - 4094257 - | nickel responsive regulator STY4228 4095327 - 4094749 - | holo-(acyl carrier protein) synthase 2 STY4229 4096428 - 4095379 - | hypothetical protein TERM 5406 4097056 - 4097073 + G 71 -10.5 -3.18945 | overlap 4097054 GCGCAATGGCGATGG GCGCGCC GCTG GGCGTGC TGTGTTATGCCTGGG TERM 5407 4097763 - 4097736 - g 100 -14.1 -5.40072 | TGGCGCTTAAAAAAA CGGCCTCCGTC TGCACT GCCGGAGGCCG CATCATCGTCGTGAA STY4230 4096560 - 4097777 + | hypothetical protein STY4231 4098338 - 4097781 - | hypothetical protein TERM 5408 4098238 - 4098260 + g 87 -8.3 -4.6391 | GAGGCCTGGCTTTCT GCGGCGGCG CTTTC TGCCGACGC TTTTGTATCGTTGTT STY4232 4099076 - 4098411 - | hypothetical protein yhhP 4099246 - 4099491 + | cell developmental protein SirA STY4234 4101158 - 4099515 - | methyl-accepting chemotaxis citrate transducer TERM 5409 4100452 - 4100470 + g 70 -8.8 -3.70902 | opp_overlap 4100455, overlap 4100453 4100455 TCTATCTCATGGGTA AGATCGCC GTC GGCGATCG TTTGAATGTGCGCCA TERM 5410 4100453 - 4100469 + g 72 -12.3 -2.82327 | opp_overlap 4100455, overlap 4100452 4100455 CTATCTCATGGGTAA GATCGCC GTC GGCGATC GTTTGAATGTGCGCC TERM 5411 4100900 - 4100931 + g 77 -3.6 -5.05782 | gap 1, overlap 4100910 TGGTTAACAGCGTGT TCATGGCG-TCCAGC GAG GCGGGATCGCGCTGA TTTTTTAACATGCGT TERM 5412 4101338 - 4101308 - R 84 -8.3 -4.58085 | gap 1, overlap 4101325 ATATGTACAAAGAAA GGAATATCG-CGGG ATAA CCCGGCGACATGCC GCCGGGTGGGAGAAG TERM 5413 4101344 - 4101325 - R 85 -12.8 -3.30007 | overlap 4101308 AATATCGCGGGATAA CCCGGCGA CATG CCGCCGGG TGGGAGAAGATTAGT zntA 4103553 - 4101355 - | zinc/cadmium/mercury/lead-transporting ATPase TERM 5414 4102664 - 4102700 + g 74 -9.5 -3.73224 | opp_overlap 4102684 ACTTTGTCGCCCGTT GCGCGCTCCACAGG-GA TAGAC TCGCCGGTG-AGCGCGC TTTCATCAAAGCTGG TERM 5415 4102947 - 4102929 - G 78 -11.8 -3.17051 | overlap 4102927 CGCCGATGAGGAACA GCAGCAAT ACC ATTGCTGC CTCCGCCGTCGCGCC TERM 5416 4103100 - 4103089 - G 71 -7.2 -3.96327 | opp_overlap 4103091 AGTGGTGACGATAAA GGCC AGTT GGCC GAACGGGTGGTTAAA TERM 5417 4103597 - 4103556 - R 75 -9.5 -3.48593 | opp_overlap 4103593 4103593, overlap 4103557 4103588 CAGGGGTCGACATAA CGTCCTCCGGTTGATGATA ATTT TCTCATTAACCGGAGGATA CACTCTGGAGTCGAC TERM 5418 4103596 - 4103557 - R 71 -10.8 -2.68942 | opp_overlap 4103593 4103593, overlap 4103556 4103588 AGGGGTCGACATAAC GTCCTCCGGTTGATGATA ATTT TCTCATTAACCGGAGGAT ACACTCTGGAGTCGA TERM 5419 4103619 - 4103600 - R 80 -12.2 -2.95223 | opp_overlap 4103593 4103593, overlap 4103588 TAACCGGAGGATACA CTCTGGAG TCGA CTCCAGAG TCAAGCGCTATTATT STY4236 4104260 - 4103634 - | hypothetical protein TERM 5420 4104190 - 4104176 - G 73 -5.6 -4.57569 | overlap 4104177 4104180 TGACGGGCTTAAAAA CCCAGC GTT GCCAGG CTGGCCCGCGATAGG TERM 5421 4104508 - 4104492 - g 78 -6.5 -4.58283 | overlap 4104480 CAACGGCGGGAAAAA GCCGC TAATGAG GCGGC GCCGTTACAGCAAAA STY4237 4104402 - 4104773 + | hypothetical protein STY4238 4105067 - 4104795 - | hypothetical protein yhhF 4105650 - 4105054 - | 16S rRNA m(2)G966-methyltransferase TERM 5422 4106821 - 4106847 + G 75 -6.4 -4.61231 | opp_overlap 4106824, overlap 4106822 4106824 CGGTTATCGCCCAGC ATACCGGCGCGG ACT CCGCCTCGGTGA TTTTTGACGCTATCC TERM 5423 4106822 - 4106846 + G 70 -9.9 -3.36256 | opp_overlap 4106824, overlap 4106821 4106824 GGTTATCGCCCAGCA TACCGGCGCGG ACT CCGCCTCGGTG ATTTTTGACGCTATC TERM 5424 4106824 - 4106844 + G 71 -10.3 -3.24422 | opp_overlap 4106824, overlap 4106822 4106821 TTATCGCCCAGCATA CCGGCGCGG ACT CCGCCTCGG TGATTTTTGACGCTA TERM 5425 4107197 - 4107217 + G 73 -5.3 -4.63486 | overlap 4107191 4107198 ACGTATCGAGGATTT GCGTCCGTT TAA GGCGGACGA TTTTATTGAGGCACT ftsY 4105776 - 4107251 + | cell division protein FtsY TERM 5426 4107709 - 4107683 - g 89 -13.6 -3.65046 | overlap 4107686 TCCGGAGGCGAACAA CAGCGCGTGGGC ATC GCCCGCGCGGTG GTCAATAAGCCAGCG TERM 5427 4107706 - 4107686 - g 78 -13.9 -2.64045 | overlap 4107683 GGAGGCGAACAACAG CGCGTGGGC ATC GCCCGCGCG GTGGTCAATAAGCCA ftsE 4107254 - 4107922 + | cell division protein FtsE ftsX 4107915 - 4108970 + | cell division protein FtsX TERM 5428 4109023 - 4108987 - f 93 -14.5 -3.30903 | opp_overlap 4108983 4109012 4109014 AAAATCGTGGTATAA TCTTTCCCTGCAATGGG CTT CCGTTCGCAGGGAAAGA GTCCCTGTTGTCTCT rpoH 4109216 - 4110070 + | RNA polymerase factor sigma-32 TERM 5429 4110066 - 4110046 - T 76 -5.3 -4.74801 | opp_overlap 4110052, overlap 4110065 GAACGCCATGAAAAA GCTTCGCGC TGC GATCGAAGC GTAATCTTCGCGAAT TERM 5430 4110092 - 4110113 + T 100 -10.9 -5.49579 | opp_overlap 4110092 CGAATTGCCAATGAA CCCTCGAAT GTGA ATTCGGGGG TTTTGTTTTTTGTAG TERM 5431 4111575 - 4111544 - T 73 -10.8 -3.06796 | opp_overlap 4111544 4111543 GGCTACGTTATTCAA CCCCGGTCACTTAC TTAT GTAAGCTTCCGGGG ATTTCATAACTTGCC STY4246 4111713 - 4111579 - | hypothetical protein TERM 5432 4111658 - 4111684 + g 89 -8.7 -4.66535 | gap 1 TCTCCCGGCATGTAG GCCGGATAAGCG TCAG CGCC-ATCCGGC TTTCTTTTAGCGCTT yhhK 4112074 - 4111691 - | hypothetical protein TERM 5433 4113057 - 4113074 + G 79 -2.7 -5.2112 | opp_overlap 4113056, overlap 4113056 4113073 GATGGCCTGAAGCAG GGCAATG CCAA TATTGTC TTTTTTGATGGTATT livK 4112496 - 4113605 + | leucine-specific binding protein TERM 5434 4113627 - 4113647 + F 75 -9.6 -3.55622 | overlap 4113628 AAGATAAGTTATCCC ACCGCCCG CACGC CGGGCGGG TTTAAAAAGGTTACC TERM 5435 4113628 - 4113646 + F 81 -13.1 -2.73159 | overlap 4113627 AGATAAGTTATCCCA CCGCCCG CACGC CGGGCGG GTTTAAAAAGGTTAC livH 4113665 - 4114591 + | branched-chain amino acid transporter permease subunit LivH livM 4114588 - 4115865 + | leucine/isoleucine/valine transporter permease subunit livG 4115862 - 4116629 + | leucine/isoleucine/valine transporter ATP-binding subunit livF 4116631 - 4117344 + | leucine/isoleucine/valine transporter ATP-binding subunit STY4253 4117508 - 4117786 + | hypothetical protein TERM 5436 4117904 - 4117929 + F 70 -2 -5.04175 | overlap 4117907 TCTCTGTCGCCTTAC TATCTTTTTT TGTAAT AAAAAAGTTA TTTTTCTGTCATTCG TERM 5437 4117989 - 4117976 - f 72 -5.2 -4.66537 | opp_overlap 4117963, overlap 4117977 CCCGCGAACATAAAA CGCG TGATAT CGCG CATCCCGGCACAAAA TERM 5438 4119062 - 4119048 - g 85 -4.9 -5.16237 | overlap 4119049 AATGGCATCAAAAAA CCGGC TACCT GCCGA TTACCACCGCCGCCT TERM 5439 4119125 - 4119115 - g 72 -2.4 -4.93296 | overlap 4119097 4119116 TTATTACGATAAAAA CCCC GGT GCGG ATATCGCCACTCGCC ugpB 4118018 - 4119334 + | glycerol-3-phosphate transporter periplasmic binding protein TERM 5440 4119360 - 4119396 + F 81 -13.1 -2.71011 | opp_overlap 4119343 4119344 4119395 GCCTGATGGCGCTGC GCTTATCAGGCCTACAG CGT TTGTAGGCCGGATAAGG TGCTTGCACCGCCAT ugpA 4119439 - 4120326 + | glycerol-3-phosphate transporter permease TERM 5441 4120864 - 4120880 + G 91 -10.1 -4.57073 | overlap 4120873 CGGCCCGTATTGACG GCGCGTC GCC GATGCGC TTTTTCCGCGACATC ugpE 4120323 - 4121168 + | glycerol-3-phosphate transporter membrane protein ugpC 4121171 - 4122241 + | glycerol-3-phosphate transporter ATP-binding subunit TERM 5442 4122882 - 4122929 + G 86 -15.1 -2.87564 | gap 3, opp_overlap 4122888, overlap 4122884 4122887 TCTGGTGTATACCGT CAATC-A-GCCCCAGCG-GGCGGC AGA GCTGCTGCGCTGGGGCGTGGATTG TATCTGCACCGATCG TERM 5443 4122884 - 4122926 + G 77 -11.3 -3.58726 | gap 2, opp_overlap 4122888, overlap 4122882 4122887 TGGTGTATACCGTCA ATCA-GCCCCAGCG-GGCGGC AGA GCTGCTGCGCTGGGGCGTGGA TTGTATCTGCACCGA TERM 5444 4122887 - 4122922 + G 83 -15.4 -2.64877 | gap 1, opp_overlap 4122888, overlap 4122884 4122882 TGTATACCGTCAATC AGCCCCAGCG-GGCGGC AGA GCTGCTGCGCTGGGGCG TGGATTGTATCTGCA TERM 5445 4122921 - 4122888 - g 83 -14.5 -2.72991 | gap 1, opp_overlap 4122887 4122884 4122882 GTATACCGTCAATCA GCCCCAGCG-GGCGGC AGA GCTGCTGCGCTGGGGC GTGGATTGTATCTGC ugpQ 4122238 - 4122978 + | cytoplasmic glycerophosphodiester phosphodiesterase STY4259 4123346 - 4122975 - | hypothetical protein TERM 5446 4125063 - 4125052 - g 77 -7.2 -4.37092 | opp_overlap 4125055, overlap 4125054 ACTGCGGGTAGAAAA GGGC TTCA GCCC CGATACGCTGAAGTT ggt 4123472 - 4125214 + | gamma-glutamyltranspeptidase periplasmic precursor TERM 5447 4125226 - 4125250 + T 86 -12.1 -3.62591 | overlap 4125228 CTGATTTTTAATTCC AGGCCCGGTGT CAG ACACCGGGCTA TTTGCAGATTATGCC TERM 5448 4125228 - 4125248 + T 100 -16.9 -3.39028 | overlap 4125226 GATTTTTAATTCCAG GCCCGGTGT CAG ACACCGGGC TATTTGCAGATTATG STY4261 4126293 - 4125259 - | puative phophotriesterase STY4262 4127261 - 4126290 - | hypothetical protein TERM 5449 4127283 - 4127310 + r 100 -5.6 -5.86976 | opp_overlap 4127269 4127287, overlap 4127286 4127287 ATCCTTATATTTTAT AAAAGGAGTAAC TTTC GTTACTCCATTG TTTTTTATTTTCTGG TERM 5450 4127286 - 4127307 + r 85 -7.3 -4.94109 | opp_overlap 4127269 4127287, overlap 4127283 4127287 CTTATATTTTATAAA AGGAGTAAC TTTC GTTACTCCA TTGTTTTTTATTTTC TERM 5451 4127306 - 4127287 - R 93 -10.8 -4.41548 | opp_overlap 4127287 4127286 4127283, overlap 4127269 TTATATTTTATAAAA GGAGTAAC TTTC GTTACTCC ATTGTTTTTTATTTT TERM 5452 4127287 - 4127306 + r 79 -10.8 -3.52805 | opp_overlap 4127269 4127287, overlap 4127286 4127283 TTATATTTTATAAAA GGAGTAAC TTTC GTTACTCC ATTGTTTTTTATTTT STY4263 4128076 - 4127315 - | hypothetical protein TERM 5453 4127761 - 4127773 + g 81 -4.1 -5.2853 | ACTCTTTAATGGATT CCAGA GCG TTTGG TTTTATTTTTAGCTG STY4264 4129306 - 4128092 - | putative ribokinase TERM 5454 4128553 - 4128566 + g 87 -2.4 -5.60993 | GCGCTGGATTGATGA TGAC CGGTAT GTCA TTTTTTTGTGCGAGA TERM 5455 4129607 - 4129592 - R 71 -7.6 -3.86015 | CACGCGCGCCATAAA GTACGT ATCA ACGTAC TCACCGTTGCGCAGG STY4265 4130059 - 4129571 - | putative acetyltransferase YhhY TERM 5456 4130250 - 4130265 + H 100 -10.4 -6.31682 | TCCAGTTTTATTTTG GCCAGC TTTT GCTGGC TTTTTTTTTGGTTTT STY4266 4130526 - 4131563 + | putative dehydrogenase STY4267 4131687 - 4132382 + | hypothetical protein TERM 5457 4132506 - 4132540 + F 86 -11.3 -3.72695 | overlap 4132507 GCAGATTTGTCGCTC ACCCCGGTCGCGTAC TTAAT GTACGCTCCCGGGGA TTTACTGAGGGACAT TERM 5458 4132507 - 4132539 + F 87 -14.8 -2.83403 | overlap 4132506 CAGATTTGTCGCTCA CCCCGGTCGCGTAC TTAAT GTACGCTCCCGGGG ATTTACTGAGGGACA TERM 5459 4133257 - 4133290 + G 75 -12.5 -2.64422 | gap 1, opp_overlap 4133263, overlap 4133246 TCGAGGCCGCCCGTC AGATGACCGC-CGCGA TTA TCGCGCGTGGTCATCG TCATATCGCCTATCT gntR 4132749 - 4133744 + | gluconate utilization operon repressor gntK 4133883 - 4134416 + | gluconate kinase 1 TERM 5460 4134472 - 4134505 + G 95 -15.3 -3.24188 | opp_overlap 4134481 ACTGCTGCTGTTTCT CGTGATGAAGGCGCG TATG CACGCCTTCGTCGCG TTAATGGTCGTCTCA TERM 5461 4134862 - 4134880 + G 95 -8 -5.10461 | overlap 4134860 TCCGCTGTTTGCGGG CGTGGCGG CAG CCGCGGCG TTTTTGTTGCCTGGG TERM 5462 4135070 - 4135086 + G 76 -10.9 -3.66356 | overlap 4135073 GAGCCGCATCTGGGC GAAGGCA AAA TGCCTTC TTTCGGCTTCAGCCT gntU 4134413 - 4135753 + | low affinity gluconate transporter TERM 5463 4135818 - 4135843 + F 93 -6.2 -5.80364 | gap 2 TATCGATACCGTAAG CCGGGTAAGGCG TAAT CGC-T-ACCCGG TTTTTTTATTGAGGT asd 4136176 - 4137282 + | aspartate-semialdehyde dehydrogenase TERM 5464 4137411 - 4137424 + F 85 -3.8 -5.48825 | CAGATTGATATGTAG GGTG CATCGT CACC TTTTTTTGCGTAATA glgB 4137658 - 4139844 + | glycogen branching enzyme TERM 5465 4139899 - 4139913 + G 74 -10 -3.6422 | overlap 4139898 CGTATGACGGTCATG GCGTGA ATT TCACGC TCTTTTCCGCCCATG TERM 5466 4139934 - 4139949 + G 74 -3.2 -4.8622 | overlap 4139928 TCCGCCCATGCGGAG CGCGTA GAGC TGTGCG TTTTTGATTCCCGAG TERM 5467 4139984 - 4140016 + G 71 -10 -3.48276 | overlap 4139972 4139986 TGAGCGTCGCTATGA CC-TGCCAGGACGTCG CGG CGATGT-CTGGCATGG TTATCTGGCAGGCGC TERM 5468 4139986 - 4140013 + G 71 -11.4 -2.88822 | gap 1, overlap 4139972 4139984 AGCGTCGCTATGACC TGCCAGGACGTCG CGG CGATGT-CTGGCA TGGTTATCTGGCAGG glgX 4139841 - 4141805 + | glycogen debranching enzyme glgC 4141820 - 4143115 + | glucose-1-phosphate adenylyltransferase TERM 5469 4144407 - 4144427 + G 72 -4 -4.75289 | gap 2, overlap 4144396 4144409 4144411 TAATGCCTGGTCGTT GCTACGCGCG ATT CG-GCGT-GC TTTTGTGTTGTGGTC glgA 4143115 - 4144548 + | glycogen synthase TERM 5470 4145409 - 4145427 + G 79 -7.4 -4.50976 | overlap 4145396 ATTCCGGACGCGAGC TACGCCTG CGC CAGGAGTA TTTTCTGGTCTCGGC TERM 5471 4145442 - 4145469 + G 70 -9.8 -3.33492 | overlap 4145443 4145445 ATTTTCTGGTCTCGG CGACGGTACAGG ATAT CCTGCACCGTCA TTATCAACTGCATAA TERM 5472 4145443 - 4145468 + G 78 -13.3 -2.59881 | overlap 4145442 4145445 TTTTCTGGTCTCGGC GACGGTACAGG ATAT CCTGCACCGTC ATTATCAACTGCATA TERM 5473 4145977 - 4145965 - g 71 -10.5 -3.18681 | opp_overlap 4145965 TTGTAACGTCACGAA CGGCG TTA CGCCG CGCCGCTGGCTGGCG glgP 4144568 - 4147015 + | glycogen phosphorylase TERM 5474 4147070 - 4147100 + T 73 -4 -4.82901 | gap 2, overlap 4147071 TTATGTATCCTTGTA GGCCGGATCAGGCG TTAGC CGCC--ATCCGGCA TTTTTCTCAGGACGC glpD 4148615 - 4147107 - | glycerol-3-phosphate dehydrogenase TERM 5475 4147578 - 4147590 + g 74 -6.9 -4.3129 | opp_overlap 4147568 4147577 4147566, overlap 4147569 AAACACGGAAAGCAG CGGCG CTT TGCCG TTTTCATCATGGATA TERM 5476 4148665 - 4148650 - H 82 -7.6 -4.70879 | GTTAAAGTTCAAAAA TGTTCG TTAT CGAACA TAATAGCAAAGAAAC TERM 5477 4148923 - 4148933 + G 71 -8.2 -3.76952 | ATGCCATGGGTCATG CGCC GCA GGCG TTTCACTTGACTAAC glpE 4148814 - 4149140 + | thiosulfate sulfurtransferase glpG 4149216 - 4150046 + | intramembrane serine protease GlpG TERM 5478 4150051 - 4150072 + F 74 -5.9 -4.56597 | gap 1 AACGAACGTGAGGCG TATC-CGGCC TGT GGTCGAGATA TTTTTCCAGGCCGGG TERM 5479 4150385 - 4150373 - g 100 -9.1 -5.16151 | CAAACGGAAGAAAAA GAGCG CAT CGCTC GCAAAGTCGCGGCCC glpR 4150139 - 4150897 + | DNA-binding transcriptional repressor GlpR TERM 5480 4150955 - 4150901 - T 72 -5 -4.57073 | overlap 4150903 4150904 4150954 GAGCTGTGCTAAAAA GACTGTCTTATCAGGCCTACACTC TGCGCGC GATGGTAGGCCTGATAAGCGAAGC GCCATCAGGCACACG malT 4153676 - 4150971 - | transcriptional regulator MalT TERM 5481 4151429 - 4151442 + g 71 -4.5 -4.56775 | gap 1, opp_overlap 4151429 AGGCATCAAGCAATA CG-CGC TGG GCGTCG TTTTTCCGCCCGGAT TERM 5482 4153258 - 4153248 - G 74 -2.4 -5.06816 | ATGCCGTAAGAAAAA GCGC ATC GCGT CGTGAATCACCGGAT TERM 5483 4155085 - 4155071 - g 76 -2.8 -5.00884 | ACGGCGGGCAAAAAA CTGC GCCTGAT GCAG CAATACTTCCAGTGC malP 4154270 - 4156663 + | maltodextrin phosphorylase TERM 5484 4156873 - 4156863 - g 81 -2.4 -5.40072 | CCGCGGGTAAAAAAA TGGC GTT GCCG GTAGAGGGGCGCGGT TERM 5485 4157202 - 4157234 + G 73 -9.1 -3.86015 | overlap 4157189 4157195 TGGCGACACGCGGCG GCGCGTTTATCGG CCTGAAC CCGATCCACGCGC TTTATCCGGCGAATC malQ 4156673 - 4158754 + | 4-alpha-glucanotransferase TERM 5486 4158780 - 4158755 - T 100 -17.7 -3.64765 | opp_overlap 4158759, overlap 4158759 AAGAAGAAGAAGTAA TAAAGCCGGGG ATTT CCCCGGCTTTA TGATGGTGAGAGCAC TERM 5487 4158776 - 4158759 - T 100 -14.1 -4.4078 | opp_overlap 4158759, overlap 4158755 AGAAGAAGTAATAAA GCCGGGG ATTT CCCCGGC TTTATGATGGTGAGA TERM 5488 4158759 - 4158776 + T 100 -14.1 -3.99324 | opp_overlap 4158759 4158755 AGAAGAAGTAATAAA GCCGGGG ATTT CCCCGGC TTTATGATGGTGAGA gntT 4160189 - 4158873 - | high-affinity gluconate transporter TERM 5489 4160548 - 4160520 - R 72 -8.8 -3.48276 | gap 1, overlap 4160521 CGGTGGGGCAGACAA GGCCCGACAGGCG CAAG CGCC-ATCGGGCA TGGATGCGGGGAAAA TERM 5490 4160547 - 4160521 - R 78 -12.3 -2.68823 | gap 1, overlap 4160520 GGTGGGGCAGACAAG GCCCGACAGGCG CAAG CGCC-ATCGGGC ATGGATGCGGGGAAA STY4285 4161141 - 4160566 - | putative DNA uptake protein STY4286 4161883 - 4161200 - | gluconate periplasmic binding protein TERM 5491 4161698 - 4161712 + g 71 -4.9 -4.56597 | opp_overlap 4161696, overlap 4161696 GACGCTCACCAGACG CTGCC AGGGC GGCGG TTTTTGCAGGCAGCG TERM 5492 4162431 - 4162408 - g 75 -6 -4.62069 | gap 1 CCCGCACCTTAAAAA GCGTAGTGCTG GCG CAGC-CTATGC CGGATGTAGAGGTGC bioH 4161921 - 4162691 + | carboxylesterase BioH STY4288 4163653 - 4162727 - | hypothetical protein TERM 5493 4163225 - 4163195 - G 71 -8.2 -3.8647 | ATCGACCAGAGGAAA GGCGGTGGCGTATA GCT TACGCGCCATCACC GGGTCGGCAAATTCA TERM 5494 4163833 - 4163804 - R 100 -15.1 -4.21462 | gap 1 AGGCATGACGCAAAA TTGCCCGGCA-GCG TGA CGCGTACCGGGCAA TATAACGCGGGATAA TERM 5495 4163882 - 4163851 - R 72 -10.2 -2.924 | gap 1, overlap 4163850 TAACGCGGGATAAAG GCCGGATAA-GACGC GTT ACGTCGCTACCCGGC GAAGGTCAACGCAAG yhgG 4164124 - 4163888 - | hypothetical protein feoB 4166455 - 4164137 - | ferrous iron transport protein B TERM 5496 4165608 - 4165597 - G 100 -5.8 -5.84381 | TCACGAACAAAAAAA TCGG TAAG CCGA GGAAGCGGTTCAGGA TERM 5497 4166432 - 4166446 + g 89 -2.8 -5.56112 | opp_overlap 4166432 ATTAGGATTACCAAT TAAACC AAT GGTTAA TTTTTTCATTTTTAT feoA 4166701 - 4166474 - | ferrous iron transport protein A TERM 5498 4166890 - 4166907 + r 73 -4.2 -4.7908 | GATAATTTGCGCCGA TGTTGA TATGGC TCAACA TTTATTTGTCTTTTT TERM 5499 4167128 - 4167095 - R 95 -13.1 -4.14739 | opp_overlap 4167096, overlap 4167096 GGACGTATTGCAAAA TCGCAGGCCGGATAA GAAG TAACCCGGCCTGCGT ATTACCCGATTAGCG TERM 5500 4167096 - 4167127 + r 88 -14.4 -3.04322 | opp_overlap 4167095 4167096 GACGTATTGCAAAAT CGCAGGCCGGATAA GAAG TAACCCGGCCTGCG TATTACCCGATTAGC TERM 5501 4167127 - 4167096 - R 100 -16.6 -3.08522 | opp_overlap 4167096, overlap 4167095 GACGTATTGCAAAAT CGCAGGCCGGATAA GAAG TAACCCGGCCTGCG TATTACCCGATTAGC STY4292 4169468 - 4167138 - | putative transcription accessory protein TERM 5502 4167215 - 4167227 + g 70 -6.9 -4.07568 | GGGCGTCACGACCGC GCGGT TTC GCCGC TTTTGACGCCGGGCG TERM 5503 4167265 - 4167286 + g 89 -13.7 -3.54307 | gap 1 TGAGCGCGATCGGCA CCGCCGC-CG CGG CGAGCGGCGG TTTCGCCGGGCTGTT TERM 5504 4167574 - 4167596 + g 78 -6.8 -4.62904 | opp_overlap 4167574 4167573 4167577, overlap 4167575 TGCGCGGTTTTAAAT TCAGGACGCG GGT CGCGGCCCGG TTTTTCCAGCTCTTT TERM 5505 4167893 - 4167912 + g 77 -8.6 -4.10161 | gap 1 GGAACTGACCGTTCT CATCG-CGC CAG GCGACGATG TTTTGCGCCATCATG greB 4170040 - 4169567 - | transcription elongation factor GreB TERM 5506 4169858 - 4169882 + g 90 -5.7 -5.22006 | gap 1 GGTCAGATATCTGAC GCGTCTGTCG ATCTCA CG-CAGGCGC TTTTTATTATACTGA ompR 4170266 - 4170985 + | osmolarity response regulator envZ 4170982 - 4172334 + | osmolarity sensor protein TERM 5507 4172335 - 4172360 + T 90 -13.4 -3.63694 | opp_overlap 4172326 4172335 4172339, overlap 4172339 ACAAAAGAGGCATAA GAAAGGGAGG TATTAC CCTCCCTTTC TTCTTAACACTGGAT TERM 5508 4172360 - 4172335 - T 90 -13.4 -3.4799 | opp_overlap 4172335 4172339, overlap 4172326 4172339 ACAAAAGAGGCATAA GAAAGGGAGG TATTAC CCTCCCTTTC TTCTTAACACTGGAT TERM 5509 4172356 - 4172339 - T 79 -8.4 -4.35091 | opp_overlap 4172335 4172339, overlap 4172335 4172326 AAGAGGCATAAGAAA GGGAGG TATTAC CCTCCC TTTCTTCTTAACACT TERM 5510 4172339 - 4172356 + T 81 -8.4 -4.45068 | opp_overlap 4172339 4172335 4172326, overlap 4172335 AAGAGGCATAAGAAA GGGAGG TATTAC CCTCCC TTTCTTCTTAACACT pckA 4174028 - 4172409 - | phosphoenolpyruvate carboxykinase TERM 5511 4172491 - 4172504 + g 72 -3.8 -4.74801 | overlap 4172489 4172490 TCAATGAACAGTTTC GCCA GCGCGG TGGC TTTTTCCTGCCATTG TERM 5512 4174181 - 4174193 + H 71 -3.3 -4.77165 | GCGGCGGTTATTATG GCAGG AAA CCTAC TTTTGTTGTGGAAAA yhgE 4174408 - 4176117 + | hypothetical protein hslO 4177106 - 4176228 - | Hsp33-like chaperonin hslR 4177532 - 4177131 - | ribosome-associated heat shock protein Hsp15 TERM 5513 4177225 - 4177240 + g 85 -4.6 -5.16472 | overlap 4177227 GTCAGGGCGTTAAGC TTGCGC GCCT GCGCCA TTTTTTCGCGTTTTT TERM 5514 4177446 - 4177465 + g 74 -7 -4.36914 | ACCGCCTTCAATCAT CTCGCGGG CCAG CGCGCGGG TTTTATAAAAACGCG TERM 5515 4177506 - 4177521 + g 77 -4.6 -4.93877 | overlap 4177508 CCATTTATCCAGTCT GACCTC AACG GAGGAC TTTTCTTTCATGGCG yrfG 4178253 - 4177543 - | putative hydrolase TERM 5516 4177955 - 4177935 - G 77 -8.1 -4.07885 | TATCGTCGCGCAAAA CGGCGCGCG GCC CTTGCGCCG TCGTCATGGCGCAAA yrfF 4180408 - 4178276 - | hypothetical protein TERM 5517 4179461 - 4179447 - G 81 -3.5 -5.28176 | gap 1, overlap 4179448 4179449 TGCAGGGATAAAAAA CGGCCC TGGC GGGC-G ACATGGCGATCAAGG TERM 5518 4179754 - 4179736 - G 72 -2.4 -4.85599 | overlap 4179737 TCCACGGTACAAAAA CGTCTG GCGTTAT CAGACA GAAAAAGAATAACAA TERM 5519 4180675 - 4180658 - H 90 -9.9 -4.54343 | opp_overlap 4180673 ATAAATGTAAATAAA CGGCAAT TCGC ATTGCCG AAACCGTGCGGTATG nudE 4180731 - 4181294 + | ADP-ribose diphosphatase NudE TERM 5520 4181388 - 4181361 - T 86 -11.4 -3.81755 | opp_overlap 4181368, overlap 4181368 ATCCGCTAAACACAA TAAAAAAGGCGC CGGA GCGCCTTTTTTG ATCAGAACAGTTCGT TERM 5521 4181381 - 4181368 - T 100 -9.5 -5.66338 | opp_overlap 4181368, overlap 4181361 AAACACAATAAAAAA GGCGC CGGA GCGCC TTTTTTGATCAGAAC TERM 5522 4181368 - 4181381 + T 100 -9.5 -5.14563 | opp_overlap 4181368 4181361 AAACACAATAAAAAA GGCGC CGGA GCGCC TTTTTTGATCAGAAC mrcA 4183966 - 4181390 - | peptidoglycan synthetase TERM 5523 4181913 - 4181903 - G 74 -8.2 -3.96148 | opp_overlap 4181901 4181903 GCTTTTGATCAGAAA CGCC AGC GGCG TATTGATCACATGCG TERM 5524 4181927 - 4181948 + g 83 -10.1 -4.07568 | CGTATTGATCACATG CGGCGCGTA CTCC TGCGTGCCG TTTTGCGCGACCAGC TERM 5525 4182553 - 4182581 + g 70 -9.5 -3.32159 | GTTTGATGTTCGACC CCACCTGACGCAA AGC TTGCGTCGCGCGG TTAAATTTACTCTGA TERM 5526 4184525 - 4184560 + G 71 -10.5 -3.21194 | gap 1, opp_overlap 4184519, overlap 4184527 CTCAATGTACGCATC GCTGCTGTAACGCCCG ATGCC TGCGCGTTACAGC-GC TTGCTGCCGTTTATA yrfD 4184063 - 4184842 + | hypothetical protein TERM 5527 4184942 - 4184968 + G 76 -2.8 -5.00616 | opp_overlap 4184946, overlap 4184946 CCCTGCTGCTGATAG CAAGCCTCGCGA CGA TCGCCCGGTTGG TTTTTTGGCAGGAGG TERM 5528 4185309 - 4185291 - g 74 -10.2 -3.53224 | CAGTTTTCCGCTAAA CCGCACGG GCG CCACGCGG CAGGATGCGCAAGGG yrfC 4184842 - 4185381 + | hypothetical protein yrfB 4185365 - 4185838 + | hypothetical protein TERM 5529 4186107 - 4186124 + GF 73 -10.5 -3.05384 | opp_overlap 4186102 GGTAAAAATTGTGCG CCGCCGC AGTG GCGGTGG TTACGTCAGGGAGCG yrfA 4185828 - 4186229 + | hypothetical protein TERM 5530 4186534 - 4186521 - gf 70 -9.5 -3.03441 | CATTAGCCTGCAATA CGCCG ATGC CGGCG AACTGGCGAAAGCGG TERM 5531 4187216 - 4187230 + GF 82 -5.6 -5.00616 | opp_overlap 4187205 AAAGCGGCGAGACGC TGGCGC TGG GCGGCA TTTTTTCGCGAAAAA hofQ 4186144 - 4187382 + | outer membrane porin HofQ aroK 4187847 - 4188368 + | shikimate kinase I TERM 5532 4188479 - 4188501 + G 85 -12.8 -3.53712 | overlap 4188471 4188475 CCGATCACCATCGCG GCTGGTTTGT TTA ACGAACCAGC TTCATTCTTGCCGCT TERM 5533 4188721 - 4188698 - g 80 -4.5 -5.08824 | opp_overlap 4188717, overlap 4188700 GCGTTACTGAAAAAA CCGCATGGT CGTGAT ACCACGCTG GTCGCGCTTGGCGGC aroB 4188425 - 4189513 + | 3-dehydroquinate synthase TERM 5534 4189888 - 4189872 - g 74 -2.2 -5.09426 | gap 1, overlap 4189873 4189874 CGTAAGCGTAAAAAA GC-GGCC CATA AGCCAGC CTCTCGTCAGTACAT damX 4189611 - 4190888 + | hypothetical protein TERM 5535 4191185 - 4191206 + G 83 -7.3 -4.60073 | overlap 4191179 4191186 TTTTGTGGGTGCCGG ATCGGTGTT TCTT AACACCGAC TTTTCTCGTTATATC TERM 5536 4191186 - 4191205 + G 73 -10.8 -3.34959 | overlap 4191179 4191185 TTTGTGGGTGCCGGA TCGGTGTT TCTT AACACCGA CTTTTCTCGTTATAT TERM 5537 4191543 - 4191531 - g 74 -3.3 -4.83615 | opp_overlap 4191529 4191532, overlap 4191532 CACTTTGCAGAAAAA GCGCA GAA TGCGT TCTTTTACTGTGAGT TERM 5538 4191532 - 4191542 + G 74 -6.8 -4.29302 | opp_overlap 4191531 4191532, overlap 4191529 ACTTTGCAGAAAAAG CGCA GAA TGCG TTCTTTTACTGTGAG dam 4191069 - 4191905 + | DNA adenine methylase TERM 5539 4191918 - 4191906 - f 75 -6.3 -4.43307 | CCTGCAAGAAAATAA TTCTC AAG GAGAA GCGGATGAAACAGTA rpe 4191923 - 4192600 + | ribulose-phosphate 3-epimerase gph 4192593 - 4193351 + | phosphoglycolate phosphatase trpS 4193344 - 4194348 + | tryptophanyl-tRNA synthetase TERM 5540 4194442 - 4194471 + T 87 -14.5 -2.8805 | opp_overlap 4194450, overlap 4194450 TGTTTATCAGACCTG TAAAAAAACCGGG AAAT CCCGGTTTTTTTG TATCTGCGCAGTCGT TERM 5541 4194450 - 4194463 + T 100 -9.5 -5.76633 | opp_overlap 4194450, overlap 4194442 AGACCTGTAAAAAAA CCGGG AAAT CCCGG TTTTTTTGTATCTGC TERM 5542 4194463 - 4194450 - T 100 -9.5 -5.42862 | opp_overlap 4194450 4194442 AGACCTGTAAAAAAA CCGGG AAAT CCCGG TTTTTTTGTATCTGC yhfL 4194662 - 4194492 - | hypothetical protein TERM 5543 4194798 - 4194835 + r 77 -10.7 -3.3636 | opp_overlap 4194806, overlap 4194796 4194802 4194804 4194806 ACCAGGGAATATGAT TTAAAAAAGGCCGCTTA ATAA TAAGCGGCCTATATTAG TGTTATATAATGTCG TERM 5544 4194802 - 4194831 + r 70 -9.3 -3.44844 | opp_overlap 4194806, overlap 4194798 4194796 4194804 4194806 GGGAATATGATTTAA AAAAGGCCGCTTA ATAA TAAGCGGCCTATA TTAGTGTTATATAAT TERM 5545 4194804 - 4194829 + r 79 -11.9 -3.28842 | opp_overlap 4194806, overlap 4194802 4194798 4194796 4194806 GAATATGATTTAAAA AAGGCCGCTTA ATAA TAAGCGGCCTA TATTAGTGTTATATA TERM 5546 4194827 - 4194806 - R 100 -14.5 -5.11613 | opp_overlap 4194806 4194804 4194802 4194798 4194796 ATATGATTTAAAAAA GGCCGCTTA ATAA TAAGCGGCC TATATTAGTGTTATA TERM 5547 4194806 - 4194827 + r 90 -14.5 -3.1984 | opp_overlap 4194806, overlap 4194804 4194802 4194798 4194796 ATATGATTTAAAAAA GGCCGCTTA ATAA TAAGCGGCC TATATTAGTGTTATA TERM 5548 4199120 - 4199160 + r 78 -12.5 -2.53876 | opp_overlap 4199120, overlap 4199119 AGCCTGCGCCATCAA CGGCGATATCGCCGGTATT GGC GATACGGGCGTCGTCGCCG TCAATTCGCGTACCA TERM 5549 4199160 - 4199120 - R 79 -11.8 -3.14211 | opp_overlap 4199119 4199120 AGCCTGCGCCATCAA CGGCGATATCGCCGGTAT TGGCG ATACGGGCGTCGTCGCCG TCAATTCGCGTACCA TERM 5550 4200754 - 4200790 + r 86 -14 -3.27298 | opp_overlap 4200760 4200764, overlap 4200755 4200760 4200764 AGATTACGAGTAGTT GTAAAATAAAGCCCTG AATAA CAGGGCTTTATTTTAA TTAATGATTAGAGAA TERM 5551 4200755 - 4200789 + r 100 -17.5 -2.56164 | opp_overlap 4200760 4200764, overlap 4200754 4200760 4200764 GATTACGAGTAGTTG TAAAATAAAGCCCTG AATAA CAGGGCTTTATTTTA ATTAATGATTAGAGA TERM 5552 4200784 - 4200760 - R 95 -13 -4.12188 | opp_overlap 4200755 4200754 4200760 4200764, overlap 4200764 CGAGTAGTTGTAAAA TAAAGCCCTG AATAA CAGGGCTTTA TTTTAATTAATGATT TERM 5553 4200760 - 4200784 + r 100 -13 -4.47217 | opp_overlap 4200760 4200764, overlap 4200755 4200754 4200764 CGAGTAGTTGTAAAA TAAAGCCCTG AATAA CAGGGCTTTA TTTTAATTAATGATT TERM 5554 4200780 - 4200764 - R 89 -9.4 -4.65933 | opp_overlap 4200760 4200755 4200754 4200764, overlap 4200760 TAGTTGTAAAATAAA GCCCTG AATAA CAGGGC TTTATTTTAATTAAT TERM 5555 4200764 - 4200780 + r 93 -9.4 -4.78981 | opp_overlap 4200764 4200760, overlap 4200760 4200755 4200754 TAGTTGTAAAATAAA GCCCTG AATAA CAGGGC TTTATTTTAATTAAT cysG 4202164 - 4200791 - | siroheme synthase nirC 4202985 - 4202176 - | nitrite transporter NirC TERM 5556 4203159 - 4203139 - R 100 -12.5 -5.10077 | overlap 4203140 AAATACGTCAAAAAA GGGGAGGCG TTG CGCCTCCCA AAAATAATTAACCGC TERM 5557 4203158 - 4203140 - R 100 -16 -3.6442 | overlap 4203139 AATACGTCAAAAAAG GGGAGGCG TTG CGCCTCCC AAAAATAATTAACCG nirD 4203493 - 4203167 - | nitrite reductase small subunit TERM 5558 4203444 - 4203406 - G 77 -7.2 -4.23892 | overlap 4203407 GGTAAGGACGGAAAA TCGCCACCTGCTCGCCGC CTG ACAGCGCGCAGACGCCGG TTCCCGGCAGGATGT nirB 4206033 - 4203490 - | nitrite reductase large subunit TERM 5559 4204660 - 4204671 + g 74 -7.2 -4.08919 | overlap 4204655 GATGCAGCCGCCGCA GCCG GTTC CGGC TTTGGTTTCCGCTTT TERM 5560 4204690 - 4204710 + g 74 -6.8 -4.24342 | overlap 4204691 GGTTTCCGCTTTCAG CGCTGCCA CGGTA TGGCAGCC TTTATTGATAGCAGC TERM 5561 4205085 - 4205098 + g 77 -8.1 -4.18018 | opp_overlap 4205095 TGGCGCTGAGATCCG CGCCT TCAA AGGCG TTTTCACTGCCGAGG TERM 5562 4206331 - 4206319 - R 70 -9.1 -3.30124 | opp_overlap 4206308 4206305, overlap 4206321 CTGTAGGCCGGATAA GACGC ATC GCGTC GCCATCCGGCAATCA yhfC 4207531 - 4206350 - | hypothetical protein TERM 5563 4207026 - 4207006 - G 74 -3.2 -4.91511 | gap 1, overlap 4207008 AGGTCAGGATAAAAA TC-GCCAGG TAGA CCAGGCCGA TGCAGGCGTAGACCC TERM 5564 4207827 - 4207841 + G 77 -7.8 -4.33907 | opp_overlap 4207818 TCAAATCGACTCTGG CGGCTG TCG CAGCTG TTTTCGCTCTTTCTG ppiA 4207808 - 4208380 + | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 5565 4208391 - 4208411 + F 100 -11.8 -4.46155 | CATAAAACATGCCTG CGCGGGTG CGAGC CGCCCGCG TTTTCTCCCTGTCTC yhfG 4208489 - 4208656 + | hypothetical protein TERM 5566 4208951 - 4208937 - g 76 -5.6 -4.70659 | overlap 4208939 GCCTATATCGAAAAA GAGGGC AAT GCCCTG ATGCAGGATCTGGAA TERM 5567 4208949 - 4208939 - g 74 -8.2 -3.96999 | overlap 4208937 CTATATCGAAAAAGA GGGC AAT GCCC TGATGCAGGATCTGG TERM 5568 4209188 - 4209207 + G 71 -4.2 -4.56597 | gap 1, opp_overlap 4209172, overlap 4209172 CGGCGCGATGGGCGA TCTCTCCGC TTT GCGG-GCGA TTTTTCAGAAAGCGA fic 4208646 - 4209248 + | cell filamentation protein Fic TERM 5569 4209467 - 4209482 + G 71 -10.4 -3.29263 | overlap 4209474 ACGCTGGCATTTCAC TGGCGG TCAT CCGCCA TTATGCCGGACGTAT TERM 5570 4209515 - 4209542 + G 72 -12 -2.73243 | overlap 4209514 CGATGCTGGGCGTTT GCCTGGGTCATC AGGC GATGGCGCAGGC CTTTGGCGCGTCGGT pabA 4209280 - 4209843 + | para-aminobenzoate synthase component II argD 4209929 - 4211146 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 5571 4211150 - 4211186 + T 77 -11.5 -3.16437 | overlap 4211143 4211141 GTGGTGGCCTGATGG CGGATTGCCGGATAAGC GTA GCGCATCCGGCAGTCGG TCTTAACCTTTTGTA TERM 5572 4212171 - 4212195 + T 70 -10 -3.05224 | gap 1, overlap 4212163 4212170 ATCATCACGCTGATG CGTCCGGCGTT GCGT AGCGCCGG-CG ATTTTAGAGACATAT TERM 5573 4212356 - 4212388 + T 72 -4.8 -4.65895 | overlap 4212354 4212358 CGGATTTTCAGGATG CTGATTAGCGATCT TCTCC AGAGCGCCAATCTG TTTTTCCATGGAGAA TERM 5574 4212488 - 4212430 - T 95 -11.6 -4.12254 | opp_overlap 4212430 4212453, overlap 4212404 4212431 GACGATGATAAAGAA TGTCATCCGCCAGCACGCGCAGACGGGC GGC GACCGTTTGCGCATTCCAGCGAATCACC TCTTCCGCATGGCTG TERM 5575 4212487 - 4212431 - T 93 -15.1 -3.0663 | opp_overlap 4212430 4212453, overlap 4212404 4212430 ACGATGATAAAGAAT GTCATCCGCCAGCACGCGCAGACGGGC GGC GACCGTTTGCGCATTCCAGCGAATCAC CTCTTCCGCATGGCT TERM 5576 4213313 - 4213292 - T 95 -8 -5.30616 | opp_overlap 4213292, overlap 4213307 4213309 CGATGCAAACAAAAA TGGCGCAT GATAAA ACGCGCCA TTCTGACGGGATTAA crp 4213957 - 4213325 - | cAMP-regulatory protein yhfA 4214265 - 4214669 + | hypothetical protein TERM 5577 4214672 - 4214712 + T 80 -5.4 -5.00895 | GATTGCGGCGTAACA CGTG-ATGCCGGATGGCGGC GTG GCC-TTATCCGGCCTACCCG TTTTTATCTCGTAGG prkB 4215634 - 4214765 - | phosphoribulokinase yheU 4215904 - 4215686 - | hypothetical protein TERM 5578 4215766 - 4215790 + g 76 -2.7 -5.06414 | overlap 4215757 4215768 CGGCCTCGCCGGATT GCAGTTGGCGT TTT ACGTCAGCGAC TTTTTGTTCAAGCGA TERM 5579 4217240 - 4217229 - g 83 -5.8 -4.95896 | AGAAAGCGAGAAAAA CCAG CAAG CTGG CGGCATTTACTTGTT STY4337 4217086 - 4217397 + | hypothetical protein TERM 5580 4217396 - 4217376 - f 78 -6.1 -4.72007 | overlap 4217379 GCTGACGAAAATAAA TCACGGCAA CCT TTGCCGCTA ACTCACATAACGCAG TERM 5581 4217393 - 4217379 - f 71 -10 -3.27205 | overlap 4217376 GACGAAAATAAATCA CGGCAA CCT TTGCCG CTAACTCACATAACG TERM 5582 4217731 - 4217673 - g 75 -12.6 -2.53213 | gap 2 TAATTGTTGAAGCCA GTTTGGGGCCGGACAGCGCGCAGAAACC GTGAG GATTTC-GAGCACTGCCCGGCCCTAAA- ATGGCGAATAAAATA STY4338 4217480 - 4217704 + | hypothetical protein yheS 4219672 - 4217765 - | putative ABC transporter ATP-binding protein TERM 5583 4218145 - 4218161 + g 80 -5.1 -4.91109 | overlap 4218146 AATCCTCCAGGTCGC CGTCGAA CGG TTCGACC TTTTTGTCGTGAACC yheR 4219938 - 4220489 + | glutathione-regulated potassium-efflux system ancillary protein KefG TERM 5584 4221706 - 4221717 + G 77 -7.2 -4.2717 | CCAGGTGGTTGTCGT CGGC TTTG GCCG TTTTGGTCAGGTGAT kefB 4220489 - 4222294 + | glutathione-regulated potassium-efflux system protein KefB yheV 4222304 - 4222504 + | hypothetical protein TERM 5585 4222625 - 4222614 - g 73 -5.8 -4.39989 | overlap 4222616 ATGAAAGTAGCAAAA GACC TGGT GGTC AGCCTGGCCTATCAG slyD 4222599 - 4223189 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 5586 4223184 - 4223169 - T 79 -10.4 -3.53012 | opp_overlap 4223154 GGCGGTGGTGGTAAA GGCAGC TGCG GCTGCC ATTAATCCCCGTCGT TERM 5587 4223235 - 4223268 + T 70 -9.5 -3.08314 | opp_overlap 4223236, overlap 4223234 TGGCTACGCTTTCAA ACCCCGGTCACATAG TTAT CTATGTTCCCGGGGA ATTTTCAAGCTTGCC TERM 5588 4223267 - 4223236 - T 90 -13 -3.54424 | opp_overlap 4223235 4223234 GGCTACGCTTTCAAA CCCCGGTCACATAG TTAT CTATGTTCCCGGGG AATTTTCAAGCTTGC TERM 5589 4223351 - 4223364 + T 100 -9.5 -5.58454 | opp_overlap 4223351 TCGGGCACAAAAAAA GCGGG TATC CCCGC TTTTTTTCGTCTCAA TERM 5590 4223364 - 4223351 - T 100 -9.5 -5.60993 | opp_overlap 4223351 TCGGGCACAAAAAAA GCGGG TATC CCCGC TTTTTTTCGTCTCAA slyX 4223594 - 4223376 - | hypothetical protein fkpA 4223814 - 4224632 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 5591 4224643 - 4224664 + F 100 -13 -6.09888 | opp_overlap 4224640 AATAAAAACTGAGAG CCGCCGCT TGTAAT AGCGGCGG TTTTTTTTATTCAGG TERM 5592 4224884 - 4224897 + F 78 -6.7 -4.59226 | opp_overlap 4224856 4224855 AAACATAACGACAGG CTCCT GAAA AGGAG TGTTTTTTTTCATGT TERM 5593 4225114 - 4225083 - g 70 -6.7 -4.21194 | gap 1 TTGCAGGATCTAAAA TGTTCAGCCATTCG TATTG CCAATGGC-GAACA TACGGGCCGTAAAAT yheO 4224909 - 4225631 + | hypothetical protein yheN 4225631 - 4226017 + | hypothetical protein TERM 5594 4226097 - 4226127 + G 100 -9.8 -5.24129 | gap 1, opp_overlap 4226116 GGATGCGCTGCTGGC GACGTC-AGCGCT AACGGA AGCGCTGGGCGTC TTTTTTATCAGCGAC yheM 4226017 - 4226373 + | hypothetical protein yheL 4226381 - 4226668 + | tRNA 2-thiouridine synthesizing protein B TERM 5595 4226724 - 4226746 + F 93 -10.6 -4.7268 | CGCCCTAAAATTCGG CGTCCTCATA TTG TGTGAGGGCG TTTTATTACGTGTTT rpsL 4226794 - 4227168 + | 30S ribosomal protein S12 rpsG 4227264 - 4227734 + | 30S ribosomal protein S7 TERM 5596 4227760 - 4227783 + F 83 -8.9 -4.21275 | gap 1 GTCATAGTCACCAGG CGGGCG-CTT CAGGT AAGTCGCCCG TTTTGGATAACTTAA fusA 4227831 - 4229945 + | elongation factor G TERM 5597 4229972 - 4229997 + F 82 -13.3 -2.78935 | opp_overlap 4229970 AAAAACCAAAATCCC GTGCTCTCTCC TGAA GGGGAGAGCGC TATAGTAAGGAATAT tuf 4230017 - 4231201 + | elongation factor Tu TERM 5598 4231231 - 4231246 + F 100 -11.8 -5.11063 | opp_overlap 4231229 4231231 GTTTTGAATTGAAGA GGGCGC TTCG GCGCCC TTTTTGTTGCCTGCT TERM 5599 4231246 - 4231231 - f 79 -11.8 -3.14878 | opp_overlap 4231231, overlap 4231229 GTTTTGAATTGAAGA GGGCGC TTCG GCGCCC TTTTTGTTGCCTGCT yheA 4231386 - 4231580 + | bacterioferritin-associated ferredoxin TERM 5600 4231579 - 4231589 + F 85 -5.4 -5.44119 | TTAAAGAGATCGCCT GAGT CAC ACTC TTTTTTTGACATCCC bfr 4231652 - 4232128 + | bacterioferritin, iron storage and detoxification protein hopD 4232592 - 4232125 - | Type III leader peptidase TERM 5601 4232519 - 4232500 - G 70 -9.2 -3.72588 | TAATGGACAGGTAAA CCGGTCAG GTAG CAGACCGG TACGCGCGTCGTATA TERM 5602 4232705 - 4232690 - H 73 -4 -4.86731 | gap 1 GCCTTCCAAAGAAAA GAT-GCG CGT CGCCATC CCATGCGTACCATCT rpsJ 4232972 - 4233283 + | 30S ribosomal protein S10 TERM 5603 4233354 - 4233340 - g 82 -5.6 -5.02074 | opp_overlap 4233339 4233352, overlap 4233342 TTAGTCGGTAAAAAA GTGGGT ATG ACCCGC ATCTTCACTGAAGAT rplC 4233316 - 4233945 + | 50S ribosomal protein L3 TERM 5604 4233988 - 4233976 - g 73 -10.5 -3.42663 | opp_overlap 4233970, overlap 4233974 ATTAGTATTGAAAGA CGCGC AGA GCGCG CTGACTGTTTCCGAA rplD 4233956 - 4234561 + | 50S ribosomal protein L4 TERM 5605 4234842 - 4234822 - g 71 -9.7 -3.57462 | opp_overlap 4234825, overlap 4234825 TACGTCACCCTGAAA GAAGGCCAG AAT CTGGACTTC GTCGGCGGCGCTGAG rplW 4234558 - 4234860 + | 50S ribosomal protein L23 rplB 4234878 - 4235699 + | 50S ribosomal protein L2 rpsS 4235716 - 4235994 + | 30S ribosomal protein S19 rplV 4236009 - 4236341 + | 50S ribosomal protein L22 TERM 5606 4237031 - 4237016 - g 70 -3.2 -4.70626 | overlap 4237007 4237017 GAACAACCGGAAAAA CCGGCT GCTC AACCGA AAAAGCAGCAGCGTA rpsC 4236359 - 4237060 + | 30S ribosomal protein S3 rplP 4237073 - 4237483 + | 50S ribosomal protein L16 rpmC 4237483 - 4237674 + | 50S ribosomal protein L29 rpsQ 4237674 - 4237928 + | 30S ribosomal protein S17 TERM 5607 4237951 - 4237976 + F 100 -12.7 -5.252 | opp_overlap 4237951 4237955 CGCATTCTCAACGAA TAAACGGCTCA GCGA TGGGCCGTTTA TTTTTTCTACCCATA TERM 5608 4237976 - 4237951 - f 77 -10.5 -3.34895 | opp_overlap 4237951, overlap 4237955 CGCATTCTCAACGAA TAAACGGCTCA GCGA TGGGCCGTTTA TTTTTTCTACCCATA TERM 5609 4237972 - 4237955 - f 74 -6.9 -4.3255 | opp_overlap 4237951, overlap 4237951 TTCTCAACGAATAAA CGGCTCA GCGA TGGGCCG TTTATTTTTTCTACC TERM 5610 4238020 - 4238032 + F 81 -3.3 -5.40474 | GTTATAATGCCGCGC CCTCG ATA TGGGG TTTTTTTAACGACCT rplN 4238092 - 4238463 + | 50S ribosomal protein L14 rplX 4238474 - 4238788 + | 50S ribosomal protein L24 TERM 5611 4238965 - 4238947 - g 71 -6 -4.30987 | ATCGCTGACAAGAAA CTGCTG GATAACG CAGCAG CAGACCTGACAGCAA rplE 4238803 - 4239342 + | 50S ribosomal protein L5 rpsN 4239357 - 4239662 + | 30S ribosomal protein S14 rpsH 4239696 - 4240088 + | 30S ribosomal protein S8 rplF 4240101 - 4240634 + | 50S ribosomal protein L6 rplR 4240644 - 4240997 + | 50S ribosomal protein L18 rpsE 4241012 - 4241515 + | 30S ribosomal protein S5 rpmD 4241519 - 4241698 + | 50S ribosomal protein L30 TERM 5612 4241756 - 4241743 - g 73 -5.2 -4.59853 | opp_overlap 4241753, overlap 4241753 CGAAGGCTCCAAAAA GGCG GGTAAA CGCC TGGGTCGTGGTATCG rplO 4241702 - 4242136 + | 50S ribosomal protein L15 TERM 5613 4242577 - 4242608 + G 80 -10.2 -3.81755 | overlap 4242583 CGAATATGCCTGGTA TGCAGGGCCTGG TGATGAAT CCAGGCTTTGCA TTCTATTTCACCGCT secY 4242144 - 4243475 + | preprotein translocase subunit SecY rpmJ 4243507 - 4243623 + | 50S ribosomal protein L36 TERM 5614 4243653 - 4243682 + F 100 -12.3 -4.6645 | gap 1 TTTCTTGCAAAGTTG GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC TTTTGTATGTCTGTA TERM 5615 4243945 - 4243927 - g 85 -8.8 -4.44667 | TGTCTGAAGAACAAA TCGACACG CTG CGTGACGA AGTTGCCAAATTTGT rpsM 4243770 - 4244126 + | 30S ribosomal protein S13 rpsK 4244143 - 4244532 + | 30S ribosomal protein S11 TERM 5616 4244539 - 4244521 - f 76 -4.4 -5.00616 | opp_overlap 4244521 4244525 CGTCCGCCGAAAAAA CGTCGCGT ATA ACGCTTCG TTTTCCAGGTTAGTT TERM 5617 4245076 - 4245066 - g 70 -6.8 -4.12188 | overlap 4245067 TGAGCAGCGTGAAAA GCCA ACC TGGC TGGAAGTTGATGCTG rpsD 4244566 - 4245186 + | 30S ribosomal protein S4 TERM 5618 4245171 - 4245189 + F 74 -10.4 -3.14132 | ACACCTGATCGTCGA GCTTTACT CCA AGTAAAGC TTAGTACCAAAGAGA TERM 5619 4246118 - 4246106 - g 76 -3.4 -5.01732 | AACCTGGGTAAAAAA TCTC TTACC GAGA TTAAAGACGTGCTGG rpoA 4245212 - 4246201 + | DNA-directed RNA polymerase subunit alpha rplQ 4246242 - 4246625 + | 50S ribosomal protein L17 TERM 5620 4246658 - 4246645 - f 100 -9.5 -5.17576 | opp_overlap 4246638 4246645 TAGTAACGTAAAAAA CCCGC TTCG GCGGG TTTTTTTATATCCTC TERM 5621 4246645 - 4246658 + F 100 -9.5 -5.74122 | opp_overlap 4246645, overlap 4246638 TAGTAACGTAAAAAA CCCGC TTCG GCGGG TTTTTTTATATCCTC yhdN 4246732 - 4247100 + | hypothetical protein zntR 4247111 - 4247536 + | zinc-responsive transcriptional regulator TERM 5622 4247744 - 4247796 + T 93 -13.6 -3.61894 | overlap 4247747 4247750 CGGTAACCGGGGGAA CTGGGAGGCCAGTGGCAAGAAAGT AAGTG ACTTTTTTACCACTGGCCTTCTGC TTATTAAGAACGGTT TERM 5623 4247747 - 4247793 + T 100 -19.7 -2.93073 | overlap 4247744 4247750 TAACCGGGGGAACTG GGAGGCCAGTGGCAAGAAAGT AAGTG ACTTTTTTACCACTGGCCTTC TGCTTATTAAGAACG TERM 5624 4247750 - 4247790 + T 100 -17.8 -3.61089 | overlap 4247747 4247744 CCGGGGGAACTGGGA GGCCAGTGGCAAGAAAGT AAGTG ACTTTTTTACCACTGGCC TTCTGCTTATTAAGA mscL 4248213 - 4247800 - | large-conductance mechanosensitive channel TERM 5625 4247870 - 4247895 + g 74 -2.5 -5.09426 | gap 1, opp_overlap 4247868, overlap 4247870 4247877 TCCTCTTTAGAAGGC GCGGGCGGAGCT GCC GGCTCT-TCTGC TTTTTTACGGTTGAG TERM 5626 4248348 - 4248330 - R 100 -11.7 -4.90917 | opp_overlap 4248329 AAAGGGAATTAAAAA GGGCGCT GAATG AGCGCCC CTTAAATTAGAGGAA trkA 4249731 - 4248355 - | potassium transporter peripheral membrane component TERM 5627 4248509 - 4248522 + g 72 -2.3 -4.9448 | overlap 4248510 ACCGCGCCAATAATG GTGCC TGGC GGCAG TTTTATTTCGTCAAT sun 4251042 - 4249753 - | 16S rRNA methyltransferase B TERM 5628 4249946 - 4249932 - G 73 -9.2 -3.87641 | overlap 4249935 AACAGGTGGCATAAA CCAGCG TCC CGCCGG GCTTCAGGCGCGGCC TERM 5629 4250342 - 4250325 - G 80 -5.5 -4.88736 | GAGGAGCGAGAAAAA CCGCACA TCCC TGCGCAG AGGCATCCTGGACAG TERM 5630 4251077 - 4251059 - R 100 -10.2 -5.54907 | overlap 4251060 TGTATAAAATAAAAA TGCCCGGT AAC ACCGGGCG TATAAAGACGTGACC TERM 5631 4251076 - 4251060 - R 100 -13.7 -3.91317 | overlap 4251059 GTATAAAATAAAAAT GCCCGGT AAC ACCGGGC GTATAAAGACGTGAC fmt 4252041 - 4251094 - | methionyl-tRNA formyltransferase TERM 5632 4251810 - 4251820 + g 74 -6.8 -4.25104 | CATGTAAGTCAGCCA CCAG ATG CTGG TTTTCCTGAGGACGA TERM 5633 4251995 - 4251973 - G 95 -14.9 -3.23452 | overlap 4251968 ATGTCCAGAAGTTAA CAGCGCGTC GAGAT GACGCGCTG CAAAGTCAGGTGTAC def 4252566 - 4252057 - | peptide deformylase STY4392 4252698 - 4253822 + | hypothetical protein smg 4253794 - 4254267 + | hypothetical protein TERM 5634 4254355 - 4254329 - g 71 -4.2 -4.56597 | overlap 4254330 4254332 TTCGGTGCGTAAAAA TGAGCCCTGCCC GCA GTGCGGGGCCGA ACTGGTAATTCGTTC TERM 5635 4254786 - 4254772 - g 76 -3.4 -5.10933 | opp_overlap 4254781, overlap 4254773 TCATCGAAAAGAAAA CCGCGC AGG GCGTGA AGCGCTTTTGCGCCA yrdD 4254294 - 4254836 + | hypothetical protein yrdC 4254841 - 4255413 + | putative ribosome maturation factor aroE 4255418 - 4256236 + | shikimate 5-dehydrogenase yrdB 4256233 - 4256490 + | hypothetical protein yrdA 4257020 - 4256466 - | putative transferase TERM 5636 4256538 - 4256576 + g 77 -8 -4.08767 | ATTGGCGGAGTACTG CAGGCCCGATCTCTCAGC ATC GCTCAGGGGGCGGATCTG TTTTACCGGACTGCC TERM 5637 4257279 - 4257265 - R 76 -4.2 -5.0916 | opp_overlap 4257265, overlap 4257266 4257273 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 5638 4257311 - 4257299 - R 71 -7.7 -4.00532 | overlap 4257309 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACGGTG TERM 5639 4259230 - 4259265 + r 77 -9.2 -4.00532 | opp_overlap 4259241 AGGCGTTGCCATCAG TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA TTTGCTCTTTAAAAA TERM 5640 4259329 - 4259305 - R 71 -8 -3.93061 | gap 1, opp_overlap 4259305 4259312, overlap 4259309 4259315 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5641 4259883 - 4259871 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5642 4259935 - 4259917 - R 70 -8.8 -3.35798 | overlap 4259920 ACCGTGTACGTACAA GCAGTGGG AGC CCCACCAC TAAGCCAGTGGTGAA TERM 5643 4262659 - 4262618 - R 93 -11.7 -3.76224 | opp_overlap 4262623 4262628, overlap 4262622 4262623 4262628 CTGCCAGGCATCAAA TTAAGCAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTA TCTGTGGTCTGCCGG TERM 5644 4262655 - 4262622 - R 88 -12.5 -3.57418 | opp_overlap 4262623 4262628, overlap 4262618 4262623 4262628 CAGGCATCAAATTAA GCAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGT TTTATCTGTGGTCTG TERM 5645 4262654 - 4262623 - R 90 -16 -2.73969 | opp_overlap 4262623 4262628, overlap 4262622 4262618 4262628 AGGCATCAAATTAAG CAAAAGGCTCAGTC GAAA GACTGGGCCTTTTG TTTTATCTGTGGTCT TERM 5646 4262623 - 4262654 + r 100 -18.2 -4.63586 | opp_overlap 4262623 4262622 4262618 4262628, overlap 4262628 AGGCATCAAATTAAG CAAAAGGCTCAGTC GAAA GACTGGGCCTTTTG TTTTATCTGTGGTCT TERM 5647 4262649 - 4262628 - R 90 -10.1 -4.5287 | opp_overlap 4262623 4262628, overlap 4262623 4262622 4262618 TCAAATTAAGCAAAA GGCTCAGTC GAAA GACTGGGCC TTTTGTTTTATCTGT TERM 5648 4262628 - 4262649 + r 100 -12.3 -5.24647 | opp_overlap 4262628 4262623 4262622 4262618, overlap 4262623 TCAAATTAAGCAAAA GGCTCAGTC GAAA GACTGGGCC TTTTGTTTTATCTGT TERM 5649 4262714 - 4262700 - R 71 -7.8 -3.99324 | opp_overlap 4262700 CCTGAGGAGGACAAA TCCGCC GGG AGCGGA TTTGAACGTTGCGCA TERM 5650 4262786 - 4262827 + r 74 -10.9 -2.81464 | opp_overlap 4262797, overlap 4262797 CTGCCAGGCATCAGA CAAGTGAAGAAGCCCATCC TGAC GGACGGGCTTTTTTGCGTG TGTGGTAACTGATAA TERM 5651 4262816 - 4262797 - R 86 -11.4 -3.76837 | opp_overlap 4262786 4262797 CAGACAAGTGAAGAA GCCCATCC TGAC GGACGGGC TTTTTTGCGTGTGTG TERM 5652 4262797 - 4262816 + r 100 -9.2 -5.14477 | opp_overlap 4262797, overlap 4262786 CAGACAAGTGAAGAA GCCCATCC TGAC GGACGGGC TTTTTTGCGTGTGTG TERM 5653 4262904 - 4262860 - R 79 -11.4 -3.30243 | gap 1, opp_overlap 4262860 4262894, overlap 4262850 4262847 ATGTAGGCCTGATAA GCGCAG-CGCCATCAGGCAAC CTGC ACCGCCGGATGGCGGCTTCGC CTTATCCGGCCTGCA yjaB 4263382 - 4262945 - | hypothetical protein metA 4263539 - 4264468 + | homoserine O-succinyltransferase TERM 5654 4264514 - 4264529 + F 100 -10.4 -5.63517 | opp_overlap 4264514 CAGCATGTTGAATCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA TERM 5655 4264529 - 4264514 - f 71 -10.4 -2.72661 | opp_overlap 4264514 CAGCATGTTGAATCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA aceB 4264737 - 4266338 + | malate synthase TERM 5656 4266574 - 4266559 - g 90 -5.4 -5.15969 | overlap 4266570 4266572 GGTGAAGCGAAAAAA GGCTAT ATCA ACAGCC TGGGCGCGCTGACTG aceA 4266370 - 4267674 + | isocitrate lyase TERM 5657 4268110 - 4268137 + G 90 -8.4 -4.72188 | overlap 4268113 TTGCCGGTTATTTGA CCACCGCTCG TTAACACC CGAGCGGTTG TTTATTTTCAGTTCG TERM 5658 4268113 - 4268134 + G 85 -8.7 -4.44301 | overlap 4268110 CCGGTTATTTGACCA CCGCTCG TTAACACC CGAGCGG TTGTTTATTTTCAGT TERM 5659 4268425 - 4268437 + G 82 -5.5 -5.08088 | opp_overlap 4268418 4268416 ATTAACCACACCTGA CGGTA CGC TGCCG TTTTTATTGCCGATT TERM 5660 4269512 - 4269498 - g 70 -9.2 -3.72576 | opp_overlap 4269507 GCGTGCGTTATGAAA CCGACC GTA GGCCGG ATAAGGCCTTTGCGC aceK 4267775 - 4269556 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein iclR 4270425 - 4269601 - | transcriptional repressor IclR TERM 5661 4269955 - 4269934 - G 80 -5.1 -4.83615 | gap 1, overlap 4269936 GAGCTGTGATAAAAA CGCCT-TGCC CGC GCCAGAGGCG TGCATGGGCAGCTTG TERM 5662 4271882 - 4271866 - g 75 -6.5 -4.41237 | overlap 4271868 ATCAAAGAAGAGAAA TACAGCG AAG CGCTGGA TGTCGCCCGTCAGCA TERM 5663 4271880 - 4271868 - g 73 -9.1 -3.79177 | overlap 4271866 CAAAGAAGAGAAATA CAGCG AAG CGCTG GATGTCGCCCGTCAG TERM 5664 4271934 - 4271983 + G 72 -12.1 -2.72344 | gap 1, opp_overlap 4271934, overlap 4271945 4271946 TATTGATATCAATAT GGATGAGGGGATGCTCGA-CGCCG AAG CGGCGATGGTGCGTTTCCTCAGCC TGATTGCCGGTGAGC TERM 5665 4272396 - 4272379 - g 74 -8.3 -3.93262 | opp_overlap 4272378 4272393 TGTGAAGACATCAAA CGCGAGC TGCC GCACGCG CTGATCTCCGGCGGC TERM 5666 4273460 - 4273423 - g 82 -5.4 -5.0133 | gap 1, overlap 4273424 CACGCCCGCAAAAAA CCGCGCA-CGCCGCCGG TCACG CTGGAAGCGGCGCGCGA TAATGATCTGGCATT metH 4270729 - 4274412 + | B12-dependent methionine synthase TERM 5667 4274441 - 4274471 + F 83 -9 -4.20918 | opp_overlap 4274443 4274445 4274448, overlap 4274443 4274445 4274448 CACTTTTCCTTACAA CATACAAGGCACTC ATT GGGTGCCTTGTCTC TTTCTTACAATTAAA TERM 5668 4274443 - 4274469 + F 93 -11.6 -3.70139 | opp_overlap 4274443 4274445 4274448, overlap 4274441 4274445 4274448 CTTTTCCTTACAACA TACAAGGCACTC ATT GGGTGCCTTGTC TCTTTCTTACAATTA TERM 5669 4274467 - 4274445 - f 79 -12 -3.17146 | opp_overlap 4274443 4274441 4274445 4274448, overlap 4274443 4274448 TTTCCTTACAACATA CAAGGCACTC ATT GGGTGCCTTG TCTCTTTCTTACAAT TERM 5670 4274445 - 4274467 + F 90 -14.2 -3.4214 | opp_overlap 4274445 4274443 4274448, overlap 4274443 4274441 4274448 TTTCCTTACAACATA CAAGGCACTC ATT GGGTGCCTTG TCTCTTTCTTACAAT TERM 5671 4274448 - 4274464 + F 79 -10.1 -3.83559 | opp_overlap 4274445 4274443 4274448, overlap 4274445 4274443 4274441 CCTTACAACATACAA GGCACTC ATT GGGTGCC TTGTCTCTTTCTTAC TERM 5672 4275365 - 4275394 + G 75 -12.8 -2.64759 | opp_overlap 4275354 4275355 4275352, overlap 4275364 4275362 AACAGCGCCGCCAAT GCTGCCGCGCGT CGCGTA GCGCTCGGCAGC CTATTGTTCAAATTG TERM 5673 4275538 - 4275564 + G 76 -5 -4.83169 | overlap 4275531 4275539 GCGCTGCCTGGCGAT GGTGCCATTTGC CGA GCTGATGGCGCG TTTTTGTAAACGAAT yjbB 4274669 - 4276300 + | hypothetical protein pepE 4277079 - 4276390 - | peptidase E STY4408 4277151 - 4277252 + | hypothetical protein TERM 5674 4277360 - 4277348 - g 89 -3.3 -5.55664 | TGACCAGCAAAAAAA TGGCC AAA GTCCA ACGCACGGCTAAAAA TERM 5675 4277396 - 4277377 - g 77 -3.5 -5.03314 | CGCACGGCTAAAAAA TCACGCG TTCAGG CTCGTGA GGCCAGAGAAGCGGT STY4409 4277287 - 4277826 + | hypothetical protein yjbC 4277873 - 4278742 + | 23S rRNA pseudouridine synthase F STY4411 4279011 - 4278739 - | hypothetical protein STY4412 4279832 - 4279074 - | deoR family regulatory protein TERM 5676 4279213 - 4279229 + g 90 -5.1 -5.1861 | opp_overlap 4279187 CCAAATTTGGTATGG TCAGCGA GAA TCACTGA TTTTTTGCTCATCGC STY4413 4280682 - 4279819 - | hypothetical protein STY4414 4281538 - 4280699 - | hypothetical protein TERM 5677 4281225 - 4281207 - G 70 -6.6 -4.08064 | overlap 4281223 AAGGTTTCGGTAAAA CCGCCGGC GAT ACCAACGG TGATAAAAATATCGT STY4415 4283040 - 4281562 - | hypothetical protein TERM 5678 4281790 - 4281780 - G 86 -6.8 -5.00616 | TTCCGGCCCAAAAAA TGGC GGA GCCA AAAACAATTTTGTTG TERM 5679 4281870 - 4281890 + g 77 -3.9 -5.00616 | opp_overlap 4281861 TAATGAGCAGGCCCG GCGTAGC AACGGCA GCTTCGC TTTTTTCACGCGGGG lysC 4284897 - 4283548 - | aspartate kinase III pgi 4285286 - 4286935 + | glucose-6-phosphate isomerase TERM 5680 4286943 - 4286991 + F 73 -11.2 -2.72144 | gap 2, opp_overlap 4286989 4286990, overlap 4286925 4286925 4286944 GCGCCTGATGGCGCT GCGCTTATCCGGTCTACGTAATGC ATA GCGTC-TGTAGGCCGGATAAG-GC GTTTCGCCGCCATCC TERM 5681 4286944 - 4286992 + F 82 -11.2 -3.53811 | opp_overlap 4286989 4286990, overlap 4286925 4286925 4286943 CGCCTGATGGCGCTG CG-CTTATCCGGTCTACGTAATGC ATA GCGTC-TGTAGGCCGGATAAGGCG TTTCGCCGCCATCCG TERM 5682 4287053 - 4287034 - f 83 -4.2 -5.31072 | opp_overlap 4287035, overlap 4287035 ATAAGATAATAAAAA GGCCGATA TTCA CATCGGCT TTTTTTATAAGATAA TERM 5683 4287035 - 4287052 + F 91 -7 -5.626 | opp_overlap 4287034 4287035 TAAGATAATAAAAAG GCCGAT ATTCAC ATCGGC TTTTTTTATAAGATA STY4418 4287376 - 4287621 + | hypothetical protein TERM 5684 4287640 - 4287661 + F 95 -11.7 -4.13014 | opp_overlap 4287640 4287643, overlap 4287643 CGGTACGTTTAACCA TAACCACAC TCCG GTGTGGTTA TTTTGCCCCTCTGGA TERM 5685 4287661 - 4287640 - f 76 -11.7 -2.72344 | opp_overlap 4287640 4287643, overlap 4287643 CGGTACGTTTAACCA TAACCACAC TCCG GTGTGGTTA TTTTGCCCCTCTGGA TERM 5686 4287643 - 4287658 + F 79 -9 -4.18908 | opp_overlap 4287640 4287643, overlap 4287640 TACGTTTAACCATAA CCACAC TCCG GTGTGG TTATTTTGCCCCTCT TERM 5687 4287658 - 4287643 - f 72 -9 -3.51329 | opp_overlap 4287643 4287640, overlap 4287640 TACGTTTAACCATAA CCACAC TCCG GTGTGG TTATTTTGCCCCTCT TERM 5688 4287979 - 4287965 - g 70 -7 -4.07568 | GCCGTCTGGTCAAAA CGCTGC TCG GCGGCG ACAACCTGATCGATG STY4419 4287685 - 4288323 + | putative lipoprotein STY4420 4288320 - 4289054 + | hypothetical protein STY4421 4289054 - 4291150 + | putative lipoprotein TERM 5689 4291373 - 4291389 + G 72 -2.1 -4.87665 | GGGGCTGCTTACCCT CGGTCTG ATC CTGGTCG TTTTTCTCGGTAAAG STY4422 4291293 - 4291703 + | phosphate-starvation-inducible protein PsiE TERM 5690 4291788 - 4291773 - T 100 -10.4 -5.66684 | TAACGCATAAAAAAA GCGCTC CGAA GAGCGC CAAAATACGACCATA malG 4292759 - 4291869 - | maltose transporter permease malF 4294318 - 4292774 - | maltose transporter membrane protein TERM 5691 4293344 - 4293332 - G 71 -4.7 -4.55849 | CAAAATTGAAATAAA CGACG GTA CGGCG TAGGGCAGAATCAGC TERM 5692 4294275 - 4294297 + g 75 -4 -4.91852 | opp_overlap 4294276, overlap 4294265 4294277 ATTACTGACCATTTA AGCTGGTCGC TTT GCCACCAGTG TTTCTTTTTAATGAC TERM 5693 4294277 - 4294295 + g 76 -8.8 -4.06997 | opp_overlap 4294276, overlap 4294265 4294275 TACTGACCATTTAAG CTGGTCGC TTT GCCACCAG TGTTTCTTTTTAATG TERM 5694 4294375 - 4294417 + r 95 -12.9 -3.86346 | gap 1, opp_overlap 4294414 TGTGCCTGATGGCGC TGCGCTTATCAGGCCTACGG TGTG TTGTAGGCCGGATAAG-GCA TTTATGCCGCCATCC malE 4295640 - 4294450 - | maltose ABC transporter periplasmic protein TERM 5695 4296437 - 4296463 + G 74 -4.4 -4.7497 | gap 1, overlap 4296446 CGCGTAGCGATTGGC CGCACGCTGGT GGCGGA GCC-GCGTGTG TTTTTGCTGGATGAA malK 4296002 - 4297111 + | maltose/maltodextrin transporter ATP-binding protein TERM 5696 4297381 - 4297369 - g 74 -7.7 -4.13995 | GGTGCACAAAGTAAA TACCG TCT CGGTA ACGAATGTGAAACCT lamB 4297201 - 4298559 + | maltoporin TERM 5697 4299467 - 4299429 - g 76 -12.2 -3.09803 | TAACGGTAGGCAATA CCGCCGCGCCGGTCGCTG CGC CAGCGCCAGTCGCGCCGA AGAAAAGCGAACCGA malM 4298723 - 4299640 + | maltose regulon periplasmic protein TERM 5698 4299674 - 4299693 + F 100 -11.4 -5.75599 | opp_overlap 4299672 GATTTTGCAGCAACT GGTGCGTC TCCT GGCGCACC TTTTTTTGTCATTTC TERM 5699 4300279 - 4300289 + G 89 -3.2 -5.47821 | CGGAAAACCGCTGTT GCTT ACC GAGC TTTTTTTACCTGCAT ubiC 4299821 - 4300318 + | chorismate pyruvate lyase ubiA 4300332 - 4301204 + | 4-hydroxybenzoate octaprenyltransferase plsB 4303723 - 4301303 - | glycerol-3-phosphate acyltransferase TERM 5700 4304139 - 4304125 - g 72 -11.4 -3.06679 | opp_overlap 4304121 4304120 AACAGCGCTATTGAA GCGGTC GTT GACCGC ATCGGTTCTGAATAC dgkA 4303894 - 4304262 + | diacylglycerol kinase TERM 5701 4304501 - 4304462 - g 100 -18.8 -3.53444 | gap 1, opp_overlap 4304450 CGACGCGTGCGGAAA TCGCGCAGCGTTTGGGG TTCCGTT CCCCAAACGCTGCG-GA AGAACACCTTAAGGC lexA 4304371 - 4304979 + | LexA repressor TERM 5702 4305294 - 4305325 + G 86 -7.2 -4.73614 | gap 1 GCCCTGTTTTCCTGG GCGGCGTGGCGGTGG GCG CGACTGCCAC-CAGC TTTCTTTTCATGCTG TERM 5703 4305837 - 4305857 + G 70 -6.7 -4.11692 | TGCTAAAACAGGCCT GGCGCGGCA ACG TGCGCCGCC TTTTGGCGCTCAATC dinF 4305158 - 4306483 + | DNA-damage-inducible SOS response protein STY4435 4306483 - 4306593 + | hypothetical protein STY4436 4306612 - 4306824 + | putative stress-response protein TERM 5704 4306882 - 4306909 + T 71 -3.4 -4.74103 | gap 1, overlap 4306881 GTTTGCTTATGAATG CGGGCGTGC CCCTCTCTACT GC-CGCCCG TTTTTCCGTTCAGGC zur 4307439 - 4306924 - | zinc uptake transcriptional repressor TERM 5705 4307376 - 4307394 + g 78 -6.6 -4.66833 | overlap 4307378 GAGGCGTCAGGCGCA CGTTGCGC TGC GCGCAGAG TTTTTCAGCTTGCGC TERM 5706 4308126 - 4308098 - g 74 -4.4 -4.74504 | gap 1, overlap 4308099 4308100 ATCTCAACGGAAAAA CCGCCCG-CGCCA ATGC CGGCGCCGGGTTG GCGGTAAGTATTCCA STY4438 4307686 - 4308996 + | hypothetical protein TERM 5707 4309007 - 4309027 + F 100 -18.3 -3.70068 | TCTGAGGTGCTTTCA CCGGAGGCG CTA CGCCTCCGG TTTAGCGTTATGCTA yjbN 4309084 - 4310082 + | tRNA-dihydrouridine synthase A TERM 5708 4310113 - 4310136 + F 91 -8.1 -5.07523 | TAGTCAATCTCACCA CGCTCTGCG CAGTTT TGCAGGGCG TTTTCTTTATATATC pspG 4310250 - 4310492 + | phage shock protein G TERM 5709 4310654 - 4310624 - T 89 -5.6 -5.80364 | gap 2, opp_overlap 4310624 4310626 4310627 4310628, overlap 4310628 AGCCGAACAAAAAAA GAAA--GGGCTTCC CGGGT GGAAGCCCAATTTC TTTGCAGAGCTATTA TERM 5710 4310626 - 4310650 + T 72 -5.6 -4.41616 | opp_overlap 4310624 4310628, overlap 4310624 4310627 4310628 CCGAACAAAAAAAGA AAGGGCTTCC CGGGT GGAAGCCCAA TTTCTTTGCAGAGCT TERM 5711 4310648 - 4310628 - T 100 -12.6 -5.33131 | opp_overlap 4310627 4310626 4310624 4310628, overlap 4310624 GAACAAAAAAAGAAA GGGCTTCC CGGGT GGAAGCCC AATTTCTTTGCAGAG TERM 5712 4310628 - 4310648 + T 78 -12.6 -2.54371 | opp_overlap 4310628 4310624, overlap 4310627 4310626 4310624 GAACAAAAAAAGAAA GGGCTTCC CGGGT GGAAGCCC AATTTCTTTGCAGAG qor 4311650 - 4310667 - | quinone oxidoreductase, NADPH-dependent TERM 5713 4310738 - 4310754 + g 74 -7.3 -4.08216 | CGCGACGGGCATCTT TTAACGC ATA GCGTTGA TTTTCAGCCACATCA TERM 5714 4311107 - 4311119 + g 75 -6.2 -4.58395 | opp_overlap 4311086, overlap 4311094 AGGCGCCGGCGTCCA GCGC CCGCT GCGC TTTTTGCGCGCTACC TERM 5715 4311801 - 4311790 - g 71 -5.8 -4.36914 | opp_overlap 4311790 GTTGCCGGGATAAAA GTGC CGCC GCAC TCGATTGAAGCGGAA TERM 5716 4312062 - 4312050 - g 78 -6.9 -4.57569 | overlap 4312052 GGAGCTGTCTAAAAA CACGC CAA GCGCG GCGAATATCAGTGCT dnaB 4311715 - 4313130 + | replicative DNA helicase alr 4313162 - 4314241 + | alanine racemase tyrB 4314427 - 4315620 + | aromatic amino acid aminotransferase TERM 5717 4315716 - 4315748 + F 72 -2.8 -5.00616 | gap 1, overlap 4315718 CGCAAATAATCCTTC CT-TTTGACCGTTAC TGGC GTTATGGTCAGATAG TTTTTTGACCAAAGA TERM 5718 4315985 - 4316007 + G 83 -10.4 -3.92324 | AAAACAGCCTGACCG GACGCCCGCC GAT GGCGGTCGGC TTTGATATTGACGAC aphA 4315807 - 4316520 + | acid phosphatase/phosphotransferase TERM 5719 4316548 - 4316524 - f 73 -4.2 -4.77036 | opp_overlap 4316527, overlap 4316525 4316527 TCGGAGTACTAAAAA TCAGGAGAGC GACAG GCTCTCCTTT TTTGCATGATTTTTG TERM 5720 4316527 - 4316545 + F 100 -10.3 -5.13521 | opp_overlap 4316525 4316524 4316527 GAGTACTAAAAATCA GGAGAGC GACAG GCTCTCC TTTTTTGCATGATTT TERM 5721 4316545 - 4316527 - f 74 -10.3 -3.29543 | opp_overlap 4316527, overlap 4316525 4316524 GAGTACTAAAAATCA GGAGAGC GACAG GCTCTCC TTTTTTGCATGATTT STY4446 4316649 - 4317065 + | hypothetical protein STY4447 4317068 - 4317424 + | hypothetical protein STY4448 4317763 - 4317425 - | hypothetical protein TERM 5722 4317698 - 4317683 - G 80 -10.4 -3.86524 | ATACGTCTGGATAAA CTCGGC AATT GCCGAG GAGGCTACAGGATGT STY4449 4318205 - 4317750 - | putative lipoprotein TERM 5723 4318333 - 4318298 - R 71 -3.9 -4.77036 | overlap 4318301 4318302 TGGGATGAGGAAAAA TGATGCCGCTTCCCG GCGAAT CGGAAAGCGGTGTGA AGGTTATTTGAGCAT TERM 5724 4318394 - 4318362 - R 76 -12 -2.60901 | gap 1, opp_overlap 4318362 4318361, overlap 4318361 ATAGGTTTAAGGAAG CG-GGCGGTATGCGA CGCC TCGCACTCCGCCACG GTTTCCGGCGTACCG uvrA 4321162 - 4318337 - | excinuclease ABC subunit A TERM 5725 4320236 - 4320222 - G 74 -2.8 -4.84363 | overlap 4320224 TGAAAGTAGTAAAAA TTGCGA CGA TCCCAA CCACGAATCGCGCCG TERM 5726 4320992 - 4320974 - G 72 -2.4 -4.88736 | gap 1 CATGAGCGACAAAAA CTGCCGC GCGTAA GCGG-AG AGCGATTCAACGTAA ssb 4321410 - 4321940 + | single-strand DNA-binding protein TERM 5727 4321996 - 4322025 + F 90 -14.5 -3.14548 | opp_overlap 4322001 4322014, overlap 4322001 4322014 ATAGTTCTCGTCTGC TGAAATGCCTGGT GTAA ACCAGGCATTTTA TTACCTGGTATTATT TERM 5728 4322020 - 4322001 - f 88 -12.2 -3.53012 | opp_overlap 4321996 4322001 4322014, overlap 4322014 TCTCGTCTGCTGAAA TGCCTGGT GTAA ACCAGGCA TTTTATTACCTGGTA TERM 5729 4322001 - 4322020 + F 100 -12.2 -4.69053 | opp_overlap 4322001 4322014, overlap 4321996 4322014 TCTCGTCTGCTGAAA TGCCTGGT GTAA ACCAGGCA TTTTATTACCTGGTA TERM 5730 4322767 - 4322795 + F 74 -6.8 -4.30719 | opp_overlap 4322770, overlap 4322770 CCTAATTAAAAAAAT GAAGAGTGTTTT TAATT AAAGCACTCATC TTTGTTGTGGGCGCA TERM 5731 4322811 - 4322833 + F 72 -2.8 -4.98255 | TTTGTTGTGGGCGCA TAAAAATGGC GTC GTTGTTTTTA TTTTTCTGATTACGA STY4452 4322993 - 4323625 + | hypothetical protein STY4453 4323622 - 4325010 + | putative integral membrane protein STY4456 4325000 - 4326307 + | putative type-I secretion protein TERM 5732 4326814 - 4326802 - g 70 -3.3 -4.72696 | TCGAAAGAAAAAGAA CTAGC ATT GCTTG CCGAAGAAATAAATA STY4457 4326304 - 4327581 + | putative type-I secretion protein TERM 5733 4328053 - 4328040 - g 90 -4.5 -5.31877 | opp_overlap 4328040 AGGCAGCAGAAAAAA CGCTC AATG AAGCG TTTGAAGTACAGAAC TERM 5734 4328252 - 4328239 - g 79 -3.1 -5.14163 | ACCTATTAATAAAAA TACCA GTAC TGGCA AAAGTAATAGCAGTA TERM 5735 4328742 - 4328732 - g 75 -6.8 -4.39998 | opp_overlap 4328731 TATGTAGATAATAAA CTGG TTG CCAG CGTTGATGTCGATAA TERM 5736 4329154 - 4329165 + G 73 -5.8 -4.44797 | GCATACCTCTGCGAC GGCA AATC TGCC TTTTACTATTGATAC TERM 5737 4329487 - 4329510 + G 76 -3 -5.093 | overlap 4329488 TACTGTTGCCCCTGT ACCTCCGACG GTTT CTTTGGAGGA TTTTGTTGTTTTACC TERM 5738 4330385 - 4330370 - g 74 -4.7 -4.81851 | ACGCAAACGCAAAAA CCAAC AATAGA GTTGG TCAACGATACGGGGG TERM 5739 4334246 - 4334228 - g 74 -3 -4.8622 | overlap 4334230 4334231 GCGGGGAACGAAAAA CACTCAGC GTC GCTGACGG TCACTGTTGATACCC TERM 5740 4337129 - 4337115 - g 70 -7.1 -4.11394 | ACGGCACGTTTAAAA CGGTG GTACT CACCG AATCAGCCGACGGCT STY4458 4327598 - 4337449 + | large repetitive protein TERM 5741 4339314 - 4339328 + G 71 -7.2 -3.96624 | opp_overlap 4339303 AAGAGGTATCATTCA CAATAG ACA CTATTG TTTCTGATCCCAGTA TERM 5742 4342444 - 4342421 - g 77 -4.4 -4.8622 | opp_overlap 4342435, overlap 4342423 TGGGTTAATGAAAAA GGCCACTGGC AGAT GCCGGTGAAC CCGCTTTATTTCACA TERM 5743 4343249 - 4343239 - g 81 -2.4 -5.43866 | opp_overlap 4343239 TAATGCTGAAAAAAA TGCC GAT GGCG TTTGGTTCTTTACGC STY4459 4337507 - 4344277 + | large repetitive protein TERM 5744 4344286 - 4344309 + F 95 -12.4 -4.00868 | opp_overlap 4344285 4344282 4344278, overlap 4344287 CGCATAATAACGGAG GCCCCTCACC TTTG GGTGAGGGGG TTTACTTATGGATAA TERM 5745 4344287 - 4344308 + F 93 -15.9 -3.00039 | opp_overlap 4344285 4344282 4344278, overlap 4344286 GCATAATAACGGAGG CCCCTCACC TTTG GGTGAGGGG GTTTACTTATGGATA STY4460 4344317 - 4346383 + | putative type-1 secretion protein TERM 5746 4346453 - 4346433 - T 100 -11.2 -5.4505 | opp_overlap 4346433 CTGCTTAATAAAAAA GACCCGTT GCACA AACGGGTC TTTTTTTGTCATTTA TERM 5747 4346433 - 4346453 + T 100 -11.2 -5.75599 | opp_overlap 4346433 CTGCTTAATAAAAAA GACCCGTT GCACA AACGGGTC TTTTTTTGTCATTTA STY4461 4346943 - 4346662 - | hypothetical protein TERM 5748 4348042 - 4348054 + G 77 -4.8 -4.88067 | GGGAATGTATGATAC GGTG ACCAA CACC TTTTTCTCCCTGAGT TERM 5749 4349088 - 4349061 - g 91 -11.2 -4.30719 | overlap 4349062 TCTGGCTACAACAAA CGCCCGCGCCTC TGAC GATACGCGGGCA GACGCCCTACAGGCG TERM 5750 4349087 - 4349062 - g 83 -12.5 -3.1811 | overlap 4349061 CTGGCTACAACAAAC GCCCGCGCCTC TGAC GATACGCGGGC AGACGCCCTACAGGC yjcC 4347506 - 4349107 + | hypothetical protein soxS 4349418 - 4349095 - | DNA-binding transcriptional regulator SoxS soxR 4349505 - 4349963 + | SoxR protein TERM 5751 4349999 - 4350024 + F 100 -13.4 -4.4572 | opp_overlap 4349999 4350004 TGAGCTCACCTAAAA CTAAAGCGCC GCTAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5752 4350024 - 4349999 - f 95 -13.4 -4.1899 | opp_overlap 4349999, overlap 4350004 TGAGCTCACCTAAAA CTAAAGCGCC GCTAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5753 4350019 - 4350004 - f 76 -7.5 -4.21922 | opp_overlap 4349999, overlap 4349999 TCACCTAAAACTAAA GCGCC GCTAAG GGCGC TTTAGTTTGTTTCCG STY4465 4350256 - 4350924 + | putative glutathione S transferase TERM 5754 4351790 - 4351771 - g 74 -4.8 -4.72272 | CCTGGTCATTAAAAA CCCGCTGG ATGG CCTGCCGG TCGCGCTGGGCGATT TERM 5755 4352576 - 4352592 + G 74 -4.3 -4.82901 | GGAACTGTCGTCATT GCGGTCG CGC TGGTCGC TTTTTATGCCGGCGG STY4466 4351271 - 4352620 + | putative xanthine/uracil permeases family protein TERM 5756 4352635 - 4352667 + F 83 -10 -4.07885 | gap 1, opp_overlap 4352642 4352643, overlap 4352642 4352643 GTTCTGCCTTCATTC TGAAAAATGGGCGGC GTTG GTCGCCCG-TTTTCA TTTTCAGGACACATC TERM 5757 4352661 - 4352642 - f 72 -4.8 -4.59773 | opp_overlap 4352635 4352642 4352643, overlap 4352643 CTTCATTCTGAAAAA TGGGCGGC GTTG GTCGCCCG TTTTCATTTTCAGGA TERM 5758 4352642 - 4352661 + F 89 -9.2 -4.67038 | opp_overlap 4352642 4352643, overlap 4352635 4352643 CTTCATTCTGAAAAA TGGGCGGC GTTG GTCGCCCG TTTTCATTTTCAGGA TERM 5759 4352643 - 4352660 + F 77 -10.5 -3.395 | opp_overlap 4352643 4352642, overlap 4352642 4352635 TTCATTCTGAAAAAT GGGCGGC GTTG GTCGCCC GTTTTCATTTTCAGG TERM 5760 4352888 - 4352904 + G 70 -6.5 -4.09556 | overlap 4352889 4352899 TCGCCATTGGCGCGC TGTTGGC GTG GCCGACG TTTGGTTTGCATGTG TERM 5761 4353262 - 4353320 + G 70 -9.4 -3.62746 | opp_overlap 4353262 4353263 CTGGTATCGCTGAAA TTCGCCGTCGCGGTGGCGATGGGGACGA TGG TCTTTACCGTCGGCGGCGCGACGCTGGA ATTTTTTAAGGTCGC STY4467 4352725 - 4354416 + | putative sodium/hydrogen exchanger family protein TERM 5762 4354440 - 4354471 + T 83 -13.8 -2.71011 | GCCCGGTGGCGCCAT GCTTATCGGGCCTA CAAG TAGGCCCGGTAAGG TGCTTGCGCCGCCAT STY4468 4355398 - 4354511 - | lysR family regulatory protein TERM 5763 4354695 - 4354669 - G 71 -8.6 -3.88787 | overlap 4354684 4354685 CCAGACGCTGACAAA TCGGCTCCGGCA AAA TGGCGATGCCGA CGCCCGCTTGCACCA STY4469 4355502 - 4355912 + | hypothetical protein TERM 5764 4356386 - 4356405 + G 76 -5 -4.73448 | gap 1, overlap 4356388 4356397 4356401 CTGGCGTGTTTGGCA TGGCG-GTC GGC GACGCGCTA TTTTTGCGTCTCTCT STY4470 4355905 - 4356594 + | hypothetical protein actP 4358282 - 4356633 - | acetate permease STY4472 4358593 - 4358279 - | hypothetical protein TERM 5765 4358515 - 4358530 + g 73 -5.4 -4.64598 | overlap 4358516 TAACCGACAGAATCG TGGCAA ACCG TTGCCG TTTTTCAACTAATTC TERM 5766 4358654 - 4358696 + r 73 -11.3 -2.53213 | gap 1, overlap 4358659 GCGCTGGCCGCACTC GCGCGCCC-CAGCCACATAG TGAA CTATGCTGCTGAGGGTGTGC TCGCTTGCCGCCTTC acs 4360790 - 4358832 - | acetyl-CoA synthetase TERM 5767 4360508 - 4360524 + g 84 -8.7 -4.26076 | opp_overlap 4360508 CGCCTTCCCAGATAA TGGCGGT GCG ATCGCCA TTTTCCTGCAAATGG STY4474 4360977 - 4361123 + | hypothetical protein TERM 5768 4361203 - 4361182 - f 91 -7.3 -5.4588 | overlap 4361172 4361183 GAAAACGATAAAAAA TCGCCATTA AAGA TAATGGCGC AATCTGGATGAGACC TERM 5769 4361202 - 4361183 - f 84 -10.8 -3.85088 | overlap 4361172 4361182 AAAACGATAAAAAAT CGCCATTA AAGA TAATGGCG CAATCTGGATGAGAC TERM 5770 4361364 - 4361347 - g 72 -4.1 -4.74103 | TGTTGAAGCGAAAAA TGAAACG TTCG CGCCTCA ACACCCCGACCAATA TERM 5771 4362613 - 4362603 - g 70 -6.8 -4.08945 | AGGACTTCCTGAAAA CGGT CGT ACCG CAGTGGGAAGATCAG nrfA 4361222 - 4362658 + | cytochrome c nitrite reductase nrfB 4362770 - 4363336 + | cytochrome c-type protein NrfB TERM 5772 4363832 - 4363816 - g 76 -10.8 -3.71108 | opp_overlap 4363815 4363811, overlap 4363805 AAAACTAACCTGAAA GCGGGC AAACA GCCCGC CTGCGTTGAGTCATG nrfC 4363333 - 4364004 + | cytochrome c-type biogenesis protein TERM 5773 4364904 - 4364918 + G 76 -3.4 -5.05712 | GCCAGTTTGACCGGC GTGCTG CTG CTGCGC TTTTTCATTCTTTAT nrfD 4364001 - 4364957 + | cytochrome c-type biogenesis protein STY4479 4364950 - 4366686 + | heme lyase subunit NrfE STY4480 4366676 - 4367188 + | formate-dependent nitrite reductase complex subunit NrfF TERM 5774 4367423 - 4367405 - g 85 -2.4 -5.4505 | gap 1, overlap 4367406 GGCTGCAAGAAAAAA TCC-GCG CCAATC CGCAGGA TAGCGAGCAATGGGC nrfG 4367185 - 4367805 + | formate-dependent nitrite reductase complex subunit NrfG TERM 5775 4367864 - 4367851 - f 85 -5.9 -5.40072 | overlap 4367852 TGCTGTTTAAAAAAA CGGCG AATG CGCCA CAGGTAAAAATTAAT TERM 5776 4368769 - 4368780 + G 91 -7.2 -4.93296 | overlap 4368768 TGGTGATGCGCTATG CGCC AGTG GGCG TTTTTGTGCTGATCG TERM 5777 4369424 - 4369407 - g 77 -4.1 -5.0538 | TTTGACCGTAAAAAA GCGCT GGCCTATG AGCGC GACGTACTGGGCAAA gltP 4368150 - 4369460 + | glutamate/aspartate:proton symporter yjcO 4370307 - 4369618 - | hypothetical protein TERM 5778 4370110 - 4370127 + g 75 -6.2 -4.57073 | overlap 4370101 4370100 4370109 CGCGCAGGCGTCGGC GTCGCC ATTGTC GGCGGC TTTTTGCGCCCAGTA TERM 5779 4370303 - 4370313 + g 75 -4 -4.88918 | AATGCAATAAGTGGT TTCA TTT TGAA TTTTATTTAGGGTAC TERM 5780 4370386 - 4370367 - R 100 -13.6 -5.64274 | opp_overlap 4370367 GTATGGATAAAAAAA CAGCCTCC GGGC GGAGGCTG TTATAGGGAAAATGC TERM 5781 4370367 - 4370386 + r 86 -13.6 -3.29144 | opp_overlap 4370367 GTATGGATAAAAAAA CAGCCTCC GGGC GGAGGCTG TTATAGGGAAAATGC fdhF 4372631 - 4370484 - | formate dehydrogenase H TERM 5782 4370770 - 4370803 + g 77 -11.1 -3.57144 | gap 1 ACCAGCGCTTCATCT TCAATGCC-CAGACGC GCG GCGTCGGCGGTATTGA TTTGCGCATAGCCCG TERM 5783 4371317 - 4371328 + g 77 -7.2 -4.30576 | opp_overlap 4371309 GTAAAATCACATCCG CCGC CGAC GCGG TTTTGGTCATGAAGA TERM 5784 4371891 - 4371918 + g 74 -4.2 -4.69053 | gap 1, overlap 4371892 AAAACCTTCGGTACG GCTG-GCGACAAA CGC TTTGTCGTACAGG TTTTCTTCAATAATG TERM 5785 4371954 - 4371972 + g 71 -4.4 -4.57073 | overlap 4371956 TCCCATGGCGTTGAG CAGCGCGA TAT TCGAGCCG TTTTTCAACGCGATA lpxO 4373878 - 4372970 - | putative membrane-bound beta-hydroxylase TERM 5786 4373579 - 4373555 - G 72 -3.5 -4.68724 | CCATTTAAGATAAAA CCGTTTCCAGC CGC GCTTGAAAAAG GTGTTGAATCCGGCG phnO 4374600 - 4374136 - | aminoalkylphosphonic acid N-acetyltransferase phnB 4375165 - 4374722 - | hypothetical protein phnA 4375620 - 4375285 - | hypothetical protein TERM 5787 4376324 - 4376336 + G 70 -6.9 -4.1421 | overlap 4376325 TCCCTTCCTGATTCG TCCGC TCG GCGGG TTATTCTTTGGTATG TERM 5788 4377439 - 4377429 - g 77 -8.2 -4.08064 | overlap 4377430 AATCGTCCGTTAAAA GGCG CAA CGCC AGCGGCGTCGGACAT proP 4376088 - 4377590 + | proline/glycine betaine transporter TERM 5789 4377702 - 4377718 + T 72 -5.1 -4.6645 | overlap 4377703 ACGACCCTGTGTAGT GTGCTGA TTG TCAGCAG TTTTATCTATGTGTG TERM 5790 4377779 - 4377794 + T 77 -9 -3.96483 | opp_overlap 4377774, overlap 4377774 TTTTTCAACAGCACC CAGGCA CGGG TGCCTG TTCTTTCCGTACGGT pmrB 4378836 - 4377757 - | sensor protein BasS/PmrB TERM 5791 4378086 - 4378064 - G 72 -12 -2.82516 | overlap 4378072 4378073 TTTCGCAGCAGCATA CGCAGTAACG TCG CGTCACCGCG CACCACCACGTCCGC TERM 5792 4378475 - 4378527 + g 73 -5.5 -4.66833 | gap 1 TCAATCTCAAGCGTG GAGCTGTGAATGGCGATCGGCG TCAGATTATC CGCCGTCCGCGCTTC-CAGCTC TTTTTGCAGTTCGGC pmrA 4379505 - 4378837 - | DNA-binding transcriptional regulator BasR STY4492 4381145 - 4379502 - | putative cell division protein TERM 5793 4380427 - 4380397 - G 80 -9.1 -4.2074 | gap 1, opp_overlap 4380398, overlap 4380393 CCGCCAAGAGAGAAA TCATCGCCGCGCGA GGTT TCGC-CAACGATGA GAATCGTCAGGTTTT TERM 5794 4380898 - 4380874 - G 77 -4.1 -5.13343 | overlap 4380876 4380877 TAAGTCAAAATAAAA TACTGCGCGGC AGC GCCGACCAGAA TAAAAATGCAGGCCA TERM 5795 4380886 - 4380876 - G 70 -6.8 -4.17301 | overlap 4380874 4380877 AGTCAAAATAAAATA CTGC GCG GCAG CGCCGACCAGAATAA TERM 5796 4381226 - 4381251 + r 82 -13.3 -3.0634 | CTTAATGTTGGTGGT GGCCGGATAAC CTGC GCTATCCGGCC TGTTGCGATAACATT STY4493 4382616 - 4381279 - | arginine:agmatin antiporter adiY 4383517 - 4382756 - | AraC family regulatory protein TERM 5797 4383735 - 4383716 - R 100 -12.1 -5.60993 | TTTTGTATAAAAAAA GCGCGGG ATGGGG CCCGCGC AAAAAGGTATGACAG adi 4386084 - 4383814 - | arginine decarboxylase TERM 5798 4385169 - 4385186 + g 100 -7 -5.60993 | CGGCTTTGGTTTTGG TCAGCG GGCTGG CGCTGA TTTTTTTCTGCAAGG TERM 5799 4385781 - 4385793 + g 76 -5.5 -4.70659 | overlap 4385779 GCAGGTCGCGGTCCA GCGAT GCC GTCGC TTTTTCCCTGTCGCC TERM 5800 4386282 - 4386256 - R 73 -10.9 -2.52015 | opp_overlap 4386256, overlap 4386255 TTGATAGCGAGCAAT TTCACCCGCCG TTTAT CGACAGGTGAA TTATTTTTTTGGCTG TERM 5801 4386256 - 4386282 + r 80 -6.5 -4.8236 | opp_overlap 4386256 4386255 TTGATAGCGAGCAAT TTCACCCGCCG TTTAT CGACAGGTGAA TTATTTTTTTGGCTG melR 4387246 - 4386314 - | DNA-binding transcriptional regulator MelR melA 4387518 - 4388870 + | alpha-galactosidase TERM 5802 4389736 - 4389752 + G 93 -8.7 -4.74706 | CTACTTCACCTATGT GATTGGC GAT GCCGATC TTTTTCCCTATTACC TERM 5803 4390172 - 4390186 + G 73 -5.7 -4.41137 | opp_overlap 4390171, overlap 4390165 CAGTCTGCGCAAACC CTGCA GGGGA TGCAG TTTATTATGATTGTC melB 4388954 - 4390384 + | melibiose:sodium symporter TERM 5804 4390437 - 4390412 - T 82 -11.9 -3.30124 | gap 1 GTGCAGGCCGGATAA GCCGGATAAGCG TAG CGC-CATCCGGC AATTAACCGATAACG fumB 4392128 - 4390482 - | fumarate hydratase class I dcuB 4393564 - 4392224 - | anaerobic C4-dicarboxylate transporter TERM 5805 4392660 - 4392671 + g 80 -4.4 -5.0538 | GCAATCATACCGGAA CGAA AAAC TTCG TTTTTTGAGATAGAC STY4500a 4393977 - 4393711 - | hypothetical protein TERM 5806 4393804 - 4393824 + g 78 -6.9 -4.64024 | overlap 4393805 CAGTAAATTATGATT TGTCTGTTT TAA AAACAGGCG TTTATTATTTAATTT TERM 5807 4394138 - 4394124 - R 100 -11.4 -4.98531 | opp_overlap 4394126 TTTTGAAATTAAAAA CAGCGC ATA GCGCTG TAATAATAGAAAATA dcuR 4395013 - 4394294 - | DNA-binding transcriptional activator DcuR TERM 5808 4394829 - 4394856 + g 72 -11.4 -3.09193 | AGATCCAATCCGTTT TCCTGCTGCATA TAGA TATCCAGCAGGA TTAGGTCAATGTGAT dcuS 4396641 - 4395010 - | sensory histidine kinase DcuS TERM 5809 4395148 - 4395168 + g 71 -4.6 -4.58395 | opp_overlap 4395134 4395138 4395135, overlap 4395136 4395142 ACCGACGCCGCGTTC GGCGCCTT TCGAC GAGACGCC TTTTTCAAAAATCGC TERM 5810 4395463 - 4395445 - G 70 -3 -4.7497 | CTTACTGAGCAAAAA GCCAGCGA TAA TCGGCGAC TTTATTTTACCCAGC TERM 5811 4396373 - 4396360 - G 91 -3.8 -5.50774 | overlap 4396362 CACAATAAACAAAAA GCCA TTATGC TGGC TCACCGCTTCGGAGA TERM 5812 4396377 - 4396416 + g 100 -18.7 -5.0133 | gap 1, opp_overlap 4396362 CATTATGCTGGCTCA CCGCTT-CGGAGAGCGGC TGAAT GCCGCTTTCCGCAGGCGG TTTTTTCAGCCCCTC TERM 5813 4396591 - 4396560 - G 100 -10.2 -5.10933 | gap 1, opp_overlap 4396559 4396558, overlap 4396545 GCACCGAAAACAAAA CGGCGCTGACCATCA GAA TGACGGT-AGTGCCG AGTTTCATGGGGCGT TERM 5814 4397026 - 4397011 - H 89 -5.4 -5.67283 | AATGGAAATAAAAAA TGGCTG AACA CAACCA TAACCCGACGTGATG TERM 5815 4398240 - 4398259 + H 74 -11.4 -2.82142 | opp_overlap 4398224, overlap 4398239 GGCAACTGGCCTTAC GGTACGCC GTAT GGCGTGCC ATTGTTGCCTGTCGG TERM 5816 4398991 - 4399007 + H 72 -6.5 -4.36914 | opp_overlap 4398982 4398991 CAGAAGGCGAGCGAA TTCCCGC ATT GCCGGAA TTTTGTCCAGCGAAA TERM 5817 4399276 - 4399320 + H 74 -10.6 -3.25942 | gap 1, overlap 4399279 4399301 TTTTACCCGGCGTGG CGGCGATGCCG-CAGGGCGCG TGGA CGCGGCTTGACGGCAACGGTG TTGATGTCGGCGGCT TERM 5818 4399279 - 4399317 + H 80 -13.1 -2.51547 | gap 1, overlap 4399276 4399301 TACCCGGCGTGGCGG CGATGCCG-CAGGGCGCG TGGA CGCGGCTTGACGGCAACG GTGTTGATGTCGGCG TERM 5819 4400101 - 4400113 + G 71 -6.2 -4.36554 | overlap 4400100 GGTCTTTACCCAGAG CGCG GTCGG CGCG TTTATTCTGCTGCTG dmsC 4400057 - 4400830 + | putative dimethyl sulfoxide reductase subunit C TERM 5820 4401193 - 4401206 + G 76 -3.1 -5.0538 | gap 1 ATGGGGGAAACCACC GC-CGA TTA TCGAGC TTTTTTACAGTCGCA STY4509 4400812 - 4401498 + | hypothetical protein TERM 5821 4401546 - 4401573 + T 80 -12.7 -2.95073 | overlap 4401543 4401546 TGCTTGTGTCGCCAT CGTGCCCGCTG TTGCGT CAGCGGGCACA GTTTACTATTACAGC TERM 5822 4401546 - 4401574 + T 95 -12.5 -3.92592 | gap 1, overlap 4401543 4401546 TGCTTGTGTCGCCAT C-GTGCCCGCTG TTGCGT CAGCGGGCACAG TTTACTATTACAGCT STY4510 4402982 - 4401582 - | hypothetical protein TERM 5823 4403312 - 4403287 - g 74 -7.5 -4.16842 | opp_overlap 4403286, overlap 4403288 TTTATTTTTAAGAAA TGCGTTACGAC ATCA GTCGTGACGCG ATCTGCTATGGATTT TERM 5824 4403311 - 4403288 - g 72 -11 -3.09784 | opp_overlap 4403286, overlap 4403287 TTATTTTTAAGAAAT GCGTTACGAC ATCA GTCGTGACGC GATCTGCTATGGATT TERM 5825 4403904 - 4403894 - g 76 -5.4 -4.79826 | AGAGATGAGCAAAAA TGGT ATC ACCA GAGCGTTGCCTTCTG STY4511 4403286 - 4404191 + | hypothetical protein TERM 5826 4404360 - 4404379 + T 100 -10.7 -5.97575 | GTCCTCCTCATATTT GCGGCAG CGTAGT CTGCCGC TTTTTTTTATAAATT STY4512 4404861 - 4404478 - | hypothetical protein STY4513 4405046 - 4404849 - | hypothetical protein TERM 5827 4404884 - 4404918 + g 93 -13 -3.99374 | opp_overlap 4404895 TCGGTGTATTGATGT TAGTGATATTATCGCC TCC GGCGCCAATATCACTA TTATTCTTCATGGAA STY4514 4405356 - 4405069 - | GerE family regulatory protein STY4515 4406228 - 4405353 - | AraC family transcription regulator TERM 5828 4406293 - 4406268 - R 72 -2.7 -4.98531 | overlap 4406261 4406271 4406283 CGTGTAAATCAAAAA TTATTCTGAAA AATA TTTCAAAAGAA AACTAATATATAGCT STY4516 4406712 - 4406494 - | hypothetical protein STY4517 4407033 - 4407326 + | hypothetical protein STY4518 4407323 - 4407814 + | putative acetyltransferase TERM 5829 4407987 - 4407973 - T 71 -7.1 -4.06055 | ATCGGGGAAACCAAA GGCGT TCTCC ACGCC CGGTCGCCCCTACGC phoN 4408807 - 4408055 - | nonspecific acid phosphatase precursor TERM 5830 4408906 - 4408895 - H 82 -5.8 -5.14477 | CATACAGGTAAAAAA GCAG GACG CTGC ACTGGCATTATCGTC TERM 5831 4409504 - 4409488 - H 100 -10.1 -5.1417 | opp_overlap 4409488 4409489, overlap 4409489 CCAGAAAAGCAAAAA CCCAGCC ATA GGCTGGA TTTTCTGAATAAGTG TERM 5832 4409488 - 4409504 + H 79 -7.9 -4.431 | opp_overlap 4409488 4409489, overlap 4409489 CCAGAAAAGCAAAAA CCCAGCC ATA GGCTGGA TTTTCTGAATAAGTG TERM 5833 4409503 - 4409489 - H 86 -11.4 -3.66876 | opp_overlap 4409488 4409489, overlap 4409488 CAGAAAAGCAAAAAC CCAGCC ATA GGCTGG ATTTTCTGAATAAGT TERM 5834 4409489 - 4409503 + H 77 -11.4 -3.25378 | opp_overlap 4409489 4409488, overlap 4409488 CAGAAAAGCAAAAAC CCAGCC ATA GGCTGG ATTTTCTGAATAAGT TERM 5835 4409551 - 4409567 + H 79 -10.9 -3.30159 | opp_overlap 4409541 4409544, overlap 4409541 TCGAACCACGGACAC GGGGATT TTC AATCCCC TTGTCAAAAAGTTAG STY4521 4409652 - 4410686 + | hypothetical protein STY4522 4410683 - 4412047 + | DNA helicase TERM 5836 4412296 - 4412282 - g 70 -3.4 -4.78764 | overlap 4412283 GAAAGTGACGAAAAA CCCGGA TAT CCCCGG CTCTCCTTATATTTT STY4523 4412040 - 4413839 + | hypothetical protein STY4524 4414008 - 4414313 + | hypothetical protein STY4525 4414441 - 4415022 + | hypothetical protein TERM 5837 4415264 - 4415275 + G 73 -5.8 -4.46775 | AACTGCATTATCTGT CAGG CAGC CCTG TTTCTGTTTTAAATG STY4526 4415107 - 4415664 + | hypothetical protein TERM 5838 4415787 - 4415738 - f 86 -11.7 -3.60098 | AGCTGTCACGTCAAA GGCGCGTACACT-GCTTTCCCTG TACCAG CAGGGAAAGCGAGTCTACA-GCC AGATAGGACAGACAG TERM 5839 4416124 - 4416146 + G 71 -7.6 -4.02334 | CGACGCCTACCCGCG GGCGCTAATC CTG GATATGCGCC TTTCTCCTCTGGATA TERM 5840 4416631 - 4416619 - g 84 -9.1 -4.2828 | CCGCACTCATCAAAA TCCGG GTA CCGGA CTCAGTCTGAATAGC TERM 5841 4416775 - 4416761 - g 71 -11.4 -2.95774 | GACAGTTACGACAGA GTCCGG CAA CCGGAC TGCAATAACGTACGT STY4528 4415909 - 4417252 + | hypothetical protein TERM 5842 4417295 - 4417265 - f 100 -9 -5.02074 | overlap 4417267 TGACTGGTTAAAAAA TATACTTTGCTGCC AGT GGCAGCATGGTACA AAAAATGACCAGAAA TERM 5843 4417293 - 4417267 - f 79 -9.4 -4.13963 | overlap 4417265 ACTGGTTAAAAAATA TACTTTGCTGCC AGT GGCAGCATGGTA CAAAAAATGACCAGA TERM 5844 4417442 - 4417458 + F 78 -12.3 -2.62616 | opp_overlap 4417439 4417438 TTAAAAAATGAGCTT TGCTGCC AGT GGCAGCA TGGTATAAAAAATGA TERM 5845 4417612 - 4417628 + F 78 -12.3 -2.62616 | opp_overlap 4417609 4417608 TTAAAAAATGAGCTT TGCTGCC AGT GGCAGCA TGGTATAAAAAATAA STY4529 4417838 - 4418617 + | hypothetical protein TERM 5846 4419324 - 4419311 - g 71 -8.1 -3.85698 | TTGGCCGGGTACAAA CGCCA ACGC TGGCG ATAGTGGTAAAGCGT TERM 5847 4419574 - 4419562 - g 70 -3.3 -4.69962 | opp_overlap 4419562, overlap 4419563 4419565 GAGAGGAAAAAACAA TCAGC GCC GCTGG CTTTCAGCCTGAGCA topB 4418728 - 4420722 + | DNA topoisomerase III TERM 5848 4420996 - 4420973 - f 95 -12.4 -3.85817 | opp_overlap 4420973 AGTTTGGTTGAGAAA TGGCCTTCGC GTTA GCGAGGGCCA TTTTTTTATGGCGAG TERM 5849 4420973 - 4420996 + F 100 -14.6 -5.60993 | opp_overlap 4420973 AGTTTGGTTGAGAAA TGGCCTTCGC GTTA GCGAGGGCCA TTTTTTTATGGCGAG TERM 5850 4421089 - 4421059 - f 74 -5.4 -4.59853 | CTAATGTTCTAAAAA TGGTCGCGAACC TTATGTC GCTTAGCGACCA CCAATGTTCCAGTGA TERM 5851 4421623 - 4421657 + G 75 -6.4 -4.66833 | opp_overlap 4421622 4421625, overlap 4421625 GGACAAAAAAGTAAT GATCGGTTTTGTTCTC AGT GGGATCAAATCCGATA TTTTTACCCTTGCAA TERM 5852 4421625 - 4421655 + G 76 -9 -3.94933 | opp_overlap 4421622 4421625, overlap 4421623 ACAAAAAAGTAATGA TCGGTTTTGTTCTC AGT GGGATCAAATCCGA TATTTTTACCCTTGC TERM 5853 4421792 - 4421774 - g 74 -3.1 -4.93318 | TATAAGGCAGAAAAA CCGGA TTCCACTCC TCCGG CCCAGAGCCAGCCCG STY4534 4421390 - 4421839 + | hypothetical protein TERM 5854 4421849 - 4421890 + F 79 -11.8 -3.23152 | gap 1, opp_overlap 4421867, overlap 4421851 4421852 4421863 4421877 TTCTGAGTTCTCCTT AAC-CCTTCCTGATGGAAA CACAC TTTCCGTCAGGAAGGTGTG TTCCTGACTTAATGT TERM 5855 4421851 - 4421888 + F 90 -14.4 -3.17586 | gap 1, opp_overlap 4421867, overlap 4421849 4421852 4421863 4421877 CTGAGTTCTCCTTAA C-CCTTCCTGATGGAAA CACAC TTTCCGTCAGGAAGGTG TGTTCCTGACTTAAT TERM 5856 4421852 - 4421886 + F 100 -18.1 -3.14581 | opp_overlap 4421867, overlap 4421851 4421849 4421863 4421877 TGAGTTCTCCTTAAC CCTTCCTGATGGAAA CACAC TTTCCGTCAGGAAGG TGTGTTCCTGACTTA TERM 5857 4421863 - 4421894 + F 78 -12.4 -2.58714 | opp_overlap 4421867, overlap 4421852 4421851 4421849 4421877 TAACCCTTCCTGATG GAAACACACTTTCC GTCA GGAAGGTGTGTTCC TGACTTAATGTAAAA TERM 5858 4421890 - 4421867 - f 75 -9.6 -3.64703 | opp_overlap 4421852 4421851 4421849 4421863 4421877 CCTTCCTGATGGAAA CACACTTTCC GTCA GGAAGGTGTG TTCCTGACTTAATGT STY4535 4421920 - 4422138 + | hypothetical protein ssB 4422151 - 4422687 + | single-strand DNA-binding protein TERM 5859 4422700 - 4422728 + F 95 -13.3 -4.13014 | opp_overlap 4422705 4422724, overlap 4422702 TGAAAATTGTCGCTG AATAATGCCTTCC TGT GGAAGGCATTATG TTTTGAACATATGAA TERM 5860 4422702 - 4422726 + F 100 -15.9 -3.66256 | opp_overlap 4422705 4422724, overlap 4422700 AAAATTGTCGCTGAA TAATGCCTTCC TGT GGAAGGCATTA TGTTTTGAACATATG TERM 5861 4422723 - 4422705 - f 90 -13.2 -3.61517 | opp_overlap 4422702 4422700 ATTGTCGCTGAATAA TGCCTTCC TGT GGAAGGCA TTATGTTTTGAACAT TERM 5862 4423756 - 4423773 + F 100 -11.3 -6.31682 | opp_overlap 4423755 4423756 TCATGTATGCAGAAT GCCAGCA ATGA TGCTGGC TTTTTTTTTCATTTT TERM 5863 4423773 - 4423756 - f 73 -11.3 -2.61912 | opp_overlap 4423756, overlap 4423755 TCATGTATGCAGAAT GCCAGCA ATGA TGCTGGC TTTTTTTTTCATTTT TERM 5864 4424684 - 4424662 - g 90 -5.5 -5.21709 | gap 1, opp_overlap 4424662, overlap 4424663 GTTCACAGGAAAAAA CCTGACCGGG ACCA CCCTGTC-GG CGTCTCATTCACCGG pilL 4423868 - 4425112 + | hypothetical protein pilN' 4425905 - 4425480 - | PilN lipoprotein pilM 4425115 - 4425534 + | hypothetical protein TERM 5865 4427033 - 4427005 - fH 72 -8.8 -3.5764 | overlap 4427007 AACTTCACGTCCAAA GACGGCAACTCG TACAT CGAGATGCCGTA CACCAAACTCCGCTC TERM 5866 4427031 - 4427007 - fH 79 -11.4 -3.36515 | overlap 4427005 CTTCACGTCCAAAGA CGGCAACTCG TACAT CGAGATGCCG TACACCAAACTCCGC TERM 5867 4427272 - 4427321 + G 93 -16 -3.05384 | gap 3 TCCGTTATCCGGCAA GCCCCG-TACGCAGGTTCT-GCGCT GGC AGCGCCAGAAC-TGGGTAGCGGGGC TTCGCTGGGAAGAAA pilO 4427237 - 4428532 + | putative pilus assembly protein pilP 4428630 - 4429100 + | pilus assembly protein TERM 5868 4429781 - 4429769 - g 73 -9.1 -3.86194 | overlap 4429758 AATCCGCCTGATAAA GCGCA CTT TGCGC CTGCCAGAAGGGATG pilQ 4429110 - 4430825 + | nucleotide-binding protein TERM 5869 4430837 - 4430862 + G 100 -7.5 -5.47218 | gap 1 ATGAGTCCTTTATAC CGTCTTCGCCGG GCG CTGGCGC-GACG TTTTTTTACGTCCGG TERM 5870 4431632 - 4431642 + G 74 -6.8 -4.3467 | ATGGAGGAAGTGGAG GAGG GGG CCTC TTTTGGTATGGCGCT pilR 4430822 - 4431907 + | hypothetical protein TERM 5871 4432011 - 4432026 + G 74 -6.8 -4.36554 | AATGTCGGCAGATGC CGGTGC CACT GCACTG TTTATTCTGGTGATC pilS 4431907 - 4432542 + | prepilin pilT 4432552 - 4433028 + | hypothetical protein pilU 4433025 - 4433687 + | prepilin peptidase pilV 4433684 - 4434991 + | prepilin 'pilV2 4435253 - 4434993 - | prepilin, alternative C-terminal region rci 4435339 - 4436490 + | shufflon-specific DNA recombinase TERM 5872 4436814 - 4436836 + G 93 -4.7 -5.53288 | ACTGGAGACAGCCCT CGTGGCGCG GCCGG TGCGTCCCG TTTTTTTCCGTTCAC pilK 4436587 - 4437054 + | hypothetical protein STY4554 4437266 - 4438141 + | hypothetical protein STY4557 4438648 - 4439562 + | hypothetical protein TERM 5873 4440028 - 4440000 - g 100 -16.1 -3.53224 | TACTCTCTCCGTAAA CATGGGCAATGCC AGC GGTATTGCCCATG ATACACAGGGAAGAC STY4558 4439581 - 4440321 + | hypothetical protein STY4559 4440435 - 4440986 + | hypothetical protein STY4560 4441022 - 4441522 + | hypothetical protein STY4561 4441532 - 4442101 + | hypothetical protein TERM 5874 4442190 - 4442200 + G 72 -2.4 -4.85396 | overlap 4442186 TCAGCTGCGGCTGGC GGGG CTG CCAC TTTTGTTCTGGTTGT TERM 5875 4442478 - 4442490 + G 79 -3.4 -5.1675 | GAAGTTGCTCCCTTT CTGA AACCG TCAG TTTTTTACTCCCTGG TERM 5876 4443900 - 4443886 - g 82 -5.6 -5.01546 | AAATTTATACAAAAA CACTGG TTT CCGGTG TGACAGATATATCCA STY4562 4442121 - 4444211 + | hypothetical protein STY4563 4444208 - 4444966 + | hypothetical protein TERM 5877 4444989 - 4445036 + F 83 -13.7 -2.71791 | gap 2, overlap 4444989 4444993 GGGTCAACCGCTGAC TTATTGTCTTCTCTGGGGGGCTG GCAC CAGCCCCCCGG-GAGGATA-TAA ATTTCAAAAAAGCAT TERM 5878 4444989 - 4445037 + F 86 -11.8 -3.53224 | gap 1, overlap 4444989 4444993 GGGTCAACCGCTGAC TTATTGTCTTCTCTGGGGGGCTG GCAC CAGCCCCCCGG-GAGGATATAAA TTTCAAAAAAGCATA TERM 5879 4444993 - 4445033 + F 95 -17 -2.64155 | gap 1, overlap 4444989 4444989 CAACCGCTGACTTAT TGTCTTCTCTGGGGGGCTG GCAC CAGCCCCCCGG-GAGGATA TAAATTTCAAAAAAG STY4564 4445185 - 4445457 + | hypothetical protein STY4565 4445457 - 4445696 + | hypothetical protein STY4566 4445726 - 4446088 + | hypothetical protein STY4568 4446469 - 4447122 + | hypothetical protein STY4569 4447122 - 4448021 + | hypothetical protein STY4570 4448011 - 4449489 + | hypothetical protein STY4571 4449482 - 4449925 + | putative lipoprotein TERM 5880 4449977 - 4449954 - g 76 -3 -5.06414 | TTTGTTTAACAAAAA CAGGCTGAAG TCAT CTTCTCCCCG GGAGCCTGACGAGTT STY4572 4449922 - 4450341 + | hypothetical protein TERM 5881 4450743 - 4450762 + G 76 -10.8 -3.65199 | GATGATGCACCTGAT TCATTGCC TCTT GGCAATGA TTTCACTGAGACGTT TERM 5882 4451198 - 4451175 - g 71 -4.6 -4.54306 | CTGAATAAAAAAATA CAGCAACTTA CCGC TACATTGCTG ACTGCGGGGCTCCAG TERM 5883 4451557 - 4451578 + G 73 -5.1 -4.58773 | overlap 4451558 4451563 ATCGTCCACGCCTCT TTATTGCCG AAGC CGGCAACAG TTTTGGTTTGCTGGC TERM 5884 4452660 - 4452648 - g 76 -3.3 -5.02231 | GAAAAAGAGGAAAAA GCGGA ACG TCAGC GGCTGATGCGAGAGT STY4573 4450338 - 4452761 + | hypothetical protein STY4574 4452916 - 4453302 + | hypothetical protein TERM 5885 4453314 - 4453333 + F 95 -12.1 -3.9344 | GTAGACAGGTACACT CGCCGGC GTAAAA GCCGGCG TTTCATATTCCGCTT TERM 5886 4453562 - 4453515 - g 95 -14.2 -3.57561 | gap 1, opp_overlap 4453554 4453558 4453559, overlap 4453516 4453559 CTGCAAGTGCGCAAA TCGTTGTTTACACCGACCAGGGG CAT CCTCCGGTCGGTGTAA-CACCGG CTATCCGGGTTGTTT TERM 5887 4453561 - 4453516 - g 95 -17.7 -2.74322 | gap 1, opp_overlap 4453554 4453558 4453559, overlap 4453515 4453559 TGCAAGTGCGCAAAT CGTTGTTTACACCGACCAGGGG CAT CCTCCGGTCGGTGTAA-CACCG GCTATCCGGGTTGTT STY4575 4453457 - 4453849 + | hypothetical protein STY4576 4453846 - 4454814 + | hypothetical protein STY4577 4454829 - 4456259 + | hypothetical protein STY4578 4456256 - 4456588 + | hypothetical protein STY4579 4456592 - 4458097 + | hypothetical protein TERM 5888 4458138 - 4458102 - T 93 -10.3 -4.58585 | opp_overlap 4458110, overlap 4458103 4458104 4458110 TAGCTAAATAAGAAA TCGTGAAAGCACTGTAA ATA TTACAGTGCTTTCATAG GTCATCCTCATTATC TERM 5889 4458137 - 4458103 - T 90 -13.8 -3.34066 | opp_overlap 4458110, overlap 4458102 4458104 4458110 AGCTAAATAAGAAAT CGTGAAAGCACTGTAA ATA TTACAGTGCTTTCATA GGTCATCCTCATTAT TERM 5890 4458136 - 4458104 - T 90 -15.1 -2.59355 | opp_overlap 4458110, overlap 4458103 4458102 4458110 GCTAAATAAGAAATC GTGAAAGCACTGTAA ATA TTACAGTGCTTTCAT AGGTCATCCTCATTA TERM 5891 4458110 - 4458130 + T 93 -12.7 -3.77196 | opp_overlap 4458104 4458103 4458102 4458110 TAAGAAATCGTGAAA GCACTGTAA ATA TTACAGTGC TTTCATAGGTCATCC TERM 5892 4458130 - 4458110 - T 93 -12.7 -3.66497 | opp_overlap 4458110, overlap 4458104 4458103 4458102 TAAGAAATCGTGAAA GCACTGTAA ATA TTACAGTGC TTTCATAGGTCATCC STY4580 4458522 - 4458133 - | hypothetical protein TERM 5893 4458734 - 4458750 + r 82 -3.1 -5.61881 | GGAGATTTAGTTTTG TTTAGTA AAT TATTAAA TTTTTCTTTTTAAAG STY4582 4459105 - 4458746 - | hypothetical protein TERM 5894 4459235 - 4459252 + H 79 -8.5 -4.21773 | overlap 4459232 TATTAAGTGGCATAC TGGAAAC TCTG GTTTCCA TTCTTTATATTCCCG TERM 5895 4460004 - 4460019 + G 71 -4.6 -4.63932 | overlap 4460006 CAAACCCTGGACCAC CGCCTC TCCT GAGGGG TTTTATTACACGATG STY4583 4459393 - 4460640 + | hypothetical protein STY4584 4460652 - 4461266 + | hypothetical protein TERM 5896 4461381 - 4461355 - T 100 -21 -3.30007 | opp_overlap 4461358, overlap 4461342 4461358 AAGATTTCCGTATAA GAACAGGGGGCA TTT TGCCCCCTGTTC TCCCGGTTATAAAAG TERM 5897 4461358 - 4461378 + T 100 -16.9 -3.34233 | opp_overlap 4461355 4461342 4461358 ATTTCCGTATAAGAA CAGGGGGCA TTT TGCCCCCTG TTCTCCCGGTTATAA TERM 5898 4461378 - 4461358 - T 100 -16.9 -3.79113 | opp_overlap 4461358, overlap 4461355 4461342 ATTTCCGTATAAGAA CAGGGGGCA TTT TGCCCCCTG TTCTCCCGGTTATAA STY4585 4462019 - 4461477 - | hypothetical protein TERM 5899 4462773 - 4462726 - H 100 -18.6 -2.79501 | gap 1, overlap 4462763 4462764 4462767 GACAGTTTGAGTATA CGCGGCGTCACTTGCGTTCGAGT AAA ACGAGAAC-CAAGTGACGCCGCA AGGCGTAAAACATCT TERM 5900 4462884 - 4462871 - H 70 -2.4 -5.01732 | overlap 4462858 AATGCGCTGAAAAAA CGTT TTCTAC AACG CCCGTCGCGTCCGTT TERM 5901 4463231 - 4463254 + H 70 -2.4 -5.02476 | TGTTCTGACTGATGG GATGCGCTGA GGGA TTAGTGTGTC TTTTTTCACCAGTGT TERM 5902 4463721 - 4463706 - g 85 -9 -4.3898 | overlap 4463695 AGGAGGTTGAGAAAA GCAACC GGGG GGTTGC AGCAACAATGTTACT STY4586 4463285 - 4464205 + | hypothetical protein TERM 5903 4464491 - 4464477 - f 70 -10 -3.06073 | overlap 4464476 GATAGCGCTTAAAAC GTTGCC TTA GGCAAC CACCAATGTTCCAGT TERM 5904 4464871 - 4464908 + G 100 -13.5 -4.48987 | gap 1, opp_overlap 4464880, overlap 4464880 4464892 TTACATCCTGCCCAT CGGGGAAAGCC-TCCCCG ATA CGGTGATGGTTTTCTCCG TTTTACTTCTGGAGA TERM 5905 4464880 - 4464899 + G 71 -4.2 -4.54477 | gap 1, opp_overlap 4464880, overlap 4464871 4464892 GCCCATCGGGGAAAG CC-TCCCCG ATA CGGTGATGG TTTTCTCCGTTTTAC STY4587 4464722 - 4465231 + | hypothetical protein TERM 5906 4465264 - 4465307 + F 86 -14 -3.21276 | gap 1, opp_overlap 4465255 4465268 4465270, overlap 4465265 4465268 CATTAACGTTACCAC CCAACAG-GGGATTTTTCCCC GTA GGGGGTAAATCCCTCTGTTGC TGTTCTGACAGGAGG TERM 5907 4465265 - 4465306 + F 100 -17.5 -2.52623 | gap 1, opp_overlap 4465255 4465268 4465270, overlap 4465264 4465268 ATTAACGTTACCACC CAACAG-GGGATTTTTCCCC GTA GGGGGTAAATCCCTCTGTTG CTGTTCTGACAGGAG TERM 5908 4465268 - 4465303 + F 86 -13.4 -3.41745 | gap 1, opp_overlap 4465255 4465268 4465270, overlap 4465265 4465264 AACGTTACCACCCAA CAG-GGGATTTTTCCCC GTA GGGGGTAAATCCCTCTG TTGCTGTTCTGACAG TERM 5909 4465303 - 4465268 - f 75 -11.2 -3.10012 | gap 1, opp_overlap 4465268 4465265 4465264, overlap 4465255 4465270 AACGTTACCACCCAA CAG-GGGATTTTTCCCC GTA GGGGGTAAATCCCTCTG TTGCTGTTCTGACAG TERM 5910 4465661 - 4465645 - g 73 -10.8 -3.33696 | opp_overlap 4465645 CTGGGGCGCAATGAA GCCCGG GCAGA CCGGGC TATATGCGCTGCAGA STY4588 4465327 - 4465707 + | hypothetical protein TERM 5911 4465909 - 4465936 + F 76 -8.5 -4.07568 | gap 2, overlap 4465926 CAACTTTTTTACCCT TGCGGGGATGCCC GCAA GGGC-TCCC-GCA TTTTACGCAGGAGGC TERM 5912 4466030 - 4466057 + F 93 -10.4 -4.55295 | overlap 4466034 TTGTTTCACACCCCG GGGCCCAGCCCC GTCA GGGGCAGGTTCC TTTATTTCTACAGGG TERM 5913 4466034 - 4466053 + F 83 -10.6 -3.79164 | overlap 4466030 TTCACACCCCGGGGC CCAGCCCC GTCA GGGGCAGG TTCCTTTATTTCTAC TERM 5914 4466135 - 4466115 - f 72 -3.1 -5.00616 | CGGTTTGTGAAAAAA CCGGCAACA CAC TGACTCCGG AGCAGGAAAACCGCG STY4589 4466173 - 4466757 + | hypothetical protein STY4590 4466754 - 4467050 + | hypothetical protein STY4591 4467128 - 4467586 + | hypothetical protein TERM 5915 4467625 - 4467656 + F 100 -15.2 -5.40072 | gap 1 GAACCTTATCCCGTA GGGAGAGTGACTCCC TGT GGGGG-CGCTCTCCC TTTTTTTCAGGAGAG STY4592 4467675 - 4469624 + | hypothetical protein TERM 5916 4469638 - 4469670 + F 79 -11.4 -3.41745 | gap 1, overlap 4469648 4469666 AGTTGCGTATTTATC TTCATCCCGACAGGG TTCT CCCTGTGGGGA-GAA TTCCTGTTCTGAACA TERM 5917 4469648 - 4469676 + F 74 -10.4 -3.28924 | gap 1, opp_overlap 4469671 4469672, overlap 4469638 4469666 4469671 TTATCTTCATCCCGA CAGGG-TTCTCCC TGTG GGGAGAATTCCTG TTCTGAACAGGAGTC STY4593 4469696 - 4470604 + | hypothetical protein TERM 5918 4470641 - 4470617 - f 100 -20.1 -2.87136 | opp_overlap 4470615 4470624 TGATTAACCACTATA CCCTCAGGGGA TTT TCCCCTGAGGG GGAAAATCCCTTTAA TERM 5919 4470624 - 4470651 + F 100 -18.6 -3.72576 | opp_overlap 4470617, overlap 4470615 CCACTATACCCTCAG GGGATTTTCCCC TGAG GGGGAAAATCCC TTTAATAAACCAGAG TERM 5920 4471418 - 4471406 - g 74 -3.3 -4.91109 | TGTTTACTATAAAAA CGGCA TTT TGCTG GAGTCGTTCACCTGG STY4594 4470678 - 4471577 + | hypothetical protein TERM 5921 4471573 - 4471556 - f 74 -11.3 -2.79831 | TCAACCGGTACCACA GCAGCCA CGAC TGGCTGC ATAAATCAACGGTAA TERM 5922 4471586 - 4471621 + F 84 -10.4 -3.99917 | gap 1, opp_overlap 4471583 4471590 4471606, overlap 4471588 4471589 4471596 TGCATAAATCAACGG TAAACCCACCGGG-GAG AAA CTCTCCCGGTGGGGATG TTTCTCCCCTTTTTT TERM 5923 4471588 - 4471619 + F 79 -10.8 -3.56864 | gap 1, opp_overlap 4471583 4471590 4471606, overlap 4471586 4471589 4471596 CATAAATCAACGGTA AACCCACCGGG-GAG AAA CTCTCCCGGTGGGGA TGTTTCTCCCCTTTT TERM 5924 4471589 - 4471618 + F 86 -14.3 -2.73034 | gap 1, opp_overlap 4471583 4471590 4471606, overlap 4471588 4471586 4471596 ATAAATCAACGGTAA ACCCACCGGG-GAG AAA CTCTCCCGGTGGGG ATGTTTCTCCCCTTT TERM 5925 4471617 - 4471590 - f 100 -17.8 -3.70505 | gap 1, opp_overlap 4471589 4471588 4471586 4471596, overlap 4471583 4471606 TAAATCAACGGTAAA CCCACCGGG-GAG AAA CTCTCCCGGTGGG GATGTTTCTCCCCTT TERM 5926 4471596 - 4471630 + F 100 -15.9 -5.40072 | gap 1, opp_overlap 4471590 4471606, overlap 4471589 4471588 4471586 AACGGTAAACCCACC GGGGAGAAAC-TCTCC CGGT GGGGATGTTTCTCCCC TTTTTTTACAGGAGA STY4595 4471619 - 4471978 + | hypothetical protein TERM 5927 4472002 - 4471985 - T 78 -12.7 -2.75081 | overlap 4471982 4471981 GAGTGTTAAAACTGA GCGGGTC TCCG GACCCGC GTAAAATCTTACCCT STY4596 4472347 - 4472078 - | hypothetical protein umuC 4473753 - 4472479 - | DNA polymerase V subunit UmuC TERM 5928 4472531 - 4472543 + g 77 -7.7 -4.3467 | GTGGTATAAGCTGGA GAGAG TAG CTCTC TTTTCATCTGCCACT TERM 5929 4473914 - 4473885 - H 74 -3.5 -4.93877 | opp_overlap 4473888 4473889, overlap 4473888 4473889 CTCCACCAAATAAAA CAATGGGTTACGT GAAA ACGTAGCCCCTTT TTCTTTGGTAGTGGC TERM 5930 4473911 - 4473888 - H 72 -5.2 -4.56436 | opp_overlap 4473888 4473889, overlap 4473885 4473889 CACCAAATAAAACAA TGGGTTACGT GAAA ACGTAGCCCC TTTTTCTTTGGTAGT TERM 5931 4473888 - 4473911 + H 95 -7.4 -5.34309 | opp_overlap 4473888 4473885 4473889, overlap 4473889 CACCAAATAAAACAA TGGGTTACGT GAAA ACGTAGCCCC TTTTTCTTTGGTAGT TERM 5932 4473889 - 4473910 + H 86 -10.9 -3.78958 | opp_overlap 4473889 4473888 4473885, overlap 4473888 ACCAAATAAAACAAT GGGTTACGT GAAA ACGTAGCCC CTTTTTCTTTGGTAG STY4599 4473973 - 4474350 + | hypothetical protein STY4600 4474655 - 4474437 - | putative positive regulator of late gene transcription TERM 5933 4474677 - 4474721 + r 95 -11.2 -4.54553 | opp_overlap 4474680 TTTCTCCGCCGCCAT TAAGTTCTCAATAATGAT ACACAAGAA ATTATTATTGAGAACTTA TTTATTCTATTTCTA STY4601 4475823 - 4474723 - | putative regulator of late gene expression TERM 5934 4475194 - 4475180 - G 71 -6.4 -4.28774 | TCAGCCAAGGTAAAA CGATGA CCG TCACCG GCTTTGCGCGTGATA TERM 5935 4475218 - 4475240 + g 79 -11.3 -3.7104 | gap 1, opp_overlap 4475217 4475218 CGTGATAGTGATAAC CGGC-AGCGG CTTG CCGCTCGCCG TTCTTCCCTGTCCCT STY4602 4476305 - 4475820 - | putative phage tail protein STY4603 4479085 - 4476305 - | hypothetical protein TERM 5936 4478791 - 4478806 + g 100 -5.4 -5.60993 | CACGCCACTGAGCTT CAAGCG CCTG CGTTTG TTTTTTTGTCGGGGA TERM 5937 4479058 - 4479071 + g 71 -8.1 -3.82824 | opp_overlap 4479055 4479058 CCGCCCCCAGAACTA CCTGC AGTC GCAGG TTATTATCACTCATC STY4604 4479197 - 4479078 - | hypothetical protein TERM 5938 4479199 - 4479179 - G 80 -11.9 -3.42395 | overlap 4479177 GCGACCAGTGAAAGA TGGTGGCAA TGT CTGCCACCA GATCATCAACCGTCA STY4605 4479514 - 4479212 - | putative phage tail protein TERM 5939 4479561 - 4479536 - R 77 -8.9 -3.90112 | overlap 4479538 4479539 TTCCTGTTAATGAAA TACTGGCGCGG CTGC CCGCGCCGTTA AGGTTAATCAGAGGC TERM 5940 4479558 - 4479538 - R 79 -10.4 -3.54146 | gap 1, overlap 4479536 4479539 CCTGTTAATGAAATA CTGGCGCGG CTGC CCGCGCC-G TTAAGGTTAATCAGA TERM 5941 4479558 - 4479539 - R 71 -10.6 -2.72166 | overlap 4479538 4479536 CTGTTAATGAAATAC TGGCGCGG CTGC CCGCGCCG TTAAGGTTAATCAGA STY4606 4480084 - 4479569 - | major tail tube protein STY4607 4481266 - 4480094 - | major tail sheath protein TERM 5942 4481316 - 4481328 + H 70 -9.1 -3.37755 | overlap 4481314 GTTCTGGTTGCCAGG CGTGC GGC GCACG TATTTCACGATGTGT TERM 5943 4482292 - 4482277 - g 82 -5.4 -4.99435 | CGGAACAACCAAAAA TGACGT TTTT ACGCCA AGCGGCGCAGGGGCC sopE 4481801 - 4482523 + | invasion-associated secreted protein. TERM 5944 4482704 - 4482666 - T 100 -9 -5.89827 | opp_overlap 4482672, overlap 4482692 AACCATCAAAAAAAA TAGCCATTGCTGCTATAT AAC ATATAGCAGCAGTCTCTA CTACATATCTATATT TERM 5945 4482672 - 4482698 + T 82 -13.2 -2.95774 | opp_overlap 4482666 4482692 CAAAAAAAATAGCCA TTGCTGCTATAT AAC ATATAGCAGCAG TCTCTACTACATATC STY4610 4483128 - 4482721 - | putative phage tail fibre protein STY4611 4484754 - 4483135 - | phage tail fibre protein STY4612 4485356 - 4484751 - | putative phage tail protein TERM 5946 4485107 - 4485078 - G 76 -5.6 -4.73388 | opp_overlap 4485092 AATGTGGATCAAAAA GCCGAACGGC TCCACCACCC GCCGCACGGC ACTGGTGGTCCCTTT STY4613 4486257 - 4485349 - | phage baseplate assembly protein TERM 5947 4485609 - 4485599 - G 70 -6.8 -4.14422 | opp_overlap 4485605 4485607 4485608 GGATAGAGAAAAATA GTGG CTT CCAC CCGGTACGGGATGAT TERM 5948 4485631 - 4485684 + g 73 -5.1 -4.57073 | opp_overlap 4485647, overlap 4485649 CGGGATGATTTCTGC GCTGCGAACCGTAAGACGGTCAGCC ACCG GGCGGACGTTCTCACTGTTCAGAGC TTTTTCCACCACGTC STY4614 4486603 - 4486244 - | phage baseplate assembly protein STY4615 4487178 - 4486600 - | putative phage baseplate assembly protein STY4616 4487693 - 4487247 - | putative phage tail completion protein STY4617 4488117 - 4487686 - | putative phage tail protein STY4618 4488638 - 4488213 - | putative regulatory protein STY4619 4489015 - 4488638 - | hypothetical protein nucD2 4489490 - 4489020 - | putative lysozyme TERM 5949 4489498 - 4489461 - G 86 -12.8 -3.68886 | gap 1 ATGAAGCGACTGAAA TCCGGGCAGCG-TGGCT GCGAT AGCCAGCACTGCCCCGA CAAGGCAGCACTTAA nucE2 4489725 - 4489510 - | secretion protein STY4622 4489932 - 4489729 - | putative phage tail protein STY4623 4490396 - 4489932 - | putative capsid completion protein TERM 5950 4490505 - 4490529 + r 79 -2.9 -5.42198 | overlap 4490507 TTAGCGGCTGTCATT GC-GCAGTCTG CGCTC CAG-CTGCTGC TTTTCTTTTTTCACA STY4624 4491140 - 4490490 - | putative phage terminase STY4625 4492208 - 4491144 - | putative major capsid protein TERM 5951 4492098 - 4492060 - G 100 -16.9 -3.73953 | gap 1, opp_overlap 4492068 ATCAGCGTCAGGAAA GCAGCAGACTGCTGGATG TGGT CTTCCAG-AGTCTGCTGC ACGGACGGCTCCACG STY4626 4493058 - 4492225 - | putative capsid protein TERM 5952 4493625 - 4493605 - g 71 -6.2 -4.28375 | gap 1 CGAACAGATCGAAAA GC-TGGAAG AAGT CTTCCACGC CTCAATGTTCGACTA TERM 5953 4493694 - 4493716 + G 91 -7.6 -5.08255 | overlap 4493695 TCCGTAATCTGCTCA AGTCGCGCCA GAT TGGCGCCACG TTTTATTTTGCCCGT TERM 5954 4493695 - 4493715 + G 79 -11.1 -3.63868 | overlap 4493694 CCGTAATCTGCTCAA GTCGCGCCA GAT TGGCGCCAC GTTTTATTTTGCCCG TERM 5955 4494593 - 4494583 - g 81 -6.8 -4.7373 | TGACGCCATTAAAAA GCTG ACA CAGC AGTACAACGTGACCT TERM 5956 4494730 - 4494712 - g 87 -8.1 -4.66833 | CCCCAACGTCAAAAA CGCCCTG GTGCT CAAGGCG TACGACATTATCAGC STY4627 4493201 - 4494967 + | terminase subunit TERM 5957 4495244 - 4495262 + G 86 -10.3 -4.17491 | overlap 4495258 CGTACATCCCGCACC GCCTGCT CAGCC AGCAGGC TTTTGCCCGTTTCGT STY4628 4494964 - 4496010 + | capsid portal protein TERM 5958 4496054 - 4496024 - T 100 -15.6 -4.47328 | overlap 4496042 AATTTTATTATAAAA GATGGTGCCATCAT ATA ACGATGACACCATC GCCCCTAAAATTTAT STY4629 4496754 - 4496059 - | hypothetical protein STY4630 4497838 - 4496774 - | hypothetical protein TERM 5959 4496837 - 4496851 + g 73 -5 -4.62872 | overlap 4496838 ATTGAATCGCTCAGT TTCTCT ACC AGAGAG TTTTTGCGGCTTACT TERM 5960 4497601 - 4497612 + g 76 -3 -5.12617 | TACCAGTCTCAATTC TTAC ACAT GTAA TTTTTTCGGTCCTTG TERM 5961 4497704 - 4497717 + g 89 -3.1 -5.50499 | overlap 4497705 ATAGTTTCTTGCCAA TTCCT TTCG AGGAG TTTTTTTACATATAA STY4631 4498899 - 4497835 - | hypothetical protein STY4632 4499127 - 4498909 - | hypothetical protein TERM 5962 4499088 - 4499069 - G 100 -15 -4.53636 | ATGACATAAGCAAAA GCCCGCCA GTTC TGGCGGGC CTGAGCAAAAACGAT TERM 5963 4499180 - 4499218 + r 93 -15.5 -3.11634 | TGGCTCGTTGTTCAA CCTTGCGGACGGTAAAA ACCAG TTTTATCGTCCGCAACG TTCGCTAATGTAACC TERM 5964 4499813 - 4499835 + r 87 -10.6 -4.07455 | overlap 4499828 GAATTGTTAAAGCCT TGCCGTCAGT ATC ACTGACGCCA TTTGTCATCTTCCTG STY4635 4502238 - 4499824 - | hypothetical protein TERM 5965 4501452 - 4501471 + g 71 -4.8 -4.56597 | opp_overlap 4501451 4501452 GGATCAGTTCATAAG GCACCGGC TTAC GGCGGCGC TTTTTGCGGCGCAAC STY4636 4503089 - 4502229 - | DNA adenine methylase TERM 5966 4503041 - 4503055 + g 80 -5.6 -4.86731 | GATGCTTAATCAGTT CCGGCA TGA TGGCGG TTTTATTTCCCGCCC STY4637 4503670 - 4503086 - | putative exonuclease STY4638 4503894 - 4503667 - | hypothetical protein STY4639 4504127 - 4503894 - | hypothetical protein STY4640 4504536 - 4504195 - | hypothetical protein STY4641 4504700 - 4504500 - | hypothetical protein cII 4505217 - 4504708 - | phage regulatory protein apl 4505492 - 4505250 - | phage regulatory protein TERM 5967 4505885 - 4505875 - g 70 -3.2 -4.7339 | overlap 4505882 AAGAAATCTCAAAAA CGAA ACC TCCG TCACGGTAAGACCAC cI 4505609 - 4506241 + | phage repressor protein cI TERM 5968 4506711 - 4506694 - g 86 -7.7 -4.70659 | gap 1 TGGCACACTGAAAAA GCTGGGCC ACT GGC-CAGC ACCCAACCCGCTCGC STY4645 4506245 - 4507270 + | phage integrase TERM 5969 4507763 - 4507748 - f 72 -6.2 -4.20817 | TATACCTCAAAATAA CTGTAT GTAT ATACAG TATGCAGGTATAAGT TERM 5970 4508044 - 4508022 - g 86 -7 -5.07053 | opp_overlap 4508024 4508027, overlap 4508024 AATGAGGTCAAAAAA GAGAAAGCCA AAG TGGCCTTCTT CTTTTCCAGTCCGAC TERM 5971 4508024 - 4508042 + G 74 -7.4 -4.19746 | opp_overlap 4508022 4508024, overlap 4508027 TGAGGTCAAAAAAGA GAAAGCCA AAG TGGCCTTC TTCTTTTCCAGTCCG TERM 5972 4508042 - 4508024 - g 83 -9.6 -4.15748 | opp_overlap 4508024 4508027, overlap 4508022 TGAGGTCAAAAAAGA GAAAGCCA AAG TGGCCTTC TTCTTTTCCAGTCCG STY4647 4507998 - 4508111 + | hypothetical protein STY4648 4508347 - 4508634 + | hypothetical protein STY4649 4508645 - 4509535 + | putative methyltransferase yjhP 4509535 - 4510281 + | hypothetical protein TERM 5973 4510291 - 4510323 + T 72 -10.5 -2.90075 | opp_overlap 4510292 CGCTAGCGAATAAGG ATCCCCCTGGTAGAT TAA AGCTGCCGGGGGGAA TATGATTCAGGGAGG TERM 5974 4510322 - 4510292 - T 70 -9.6 -2.94872 | opp_overlap 4510291 GCTAGCGAATAAGGA TCCCCCTGGTAGAT TAA AGCTGCCGGGGGGA ATATGATTCAGGGAG vexE 4512553 - 4510583 - | VI polysaccharide export protein TERM 5975 4510904 - 4510862 - G 95 -11.2 -4.65895 | opp_overlap 4510871, overlap 4510864 TTGCTGACCGAAAAA GTCGATAGTCGGCGCACTCA AAT TCAGCGCGCCGTCTATTGCC ACCACAAGCGACTGT TERM 5976 4510902 - 4510864 - G 72 -12.4 -2.63208 | opp_overlap 4510871, overlap 4510862 GCTGACCGAAAAAGT CGATAGTCGGCGCACTCA AAT TCAGCGCGCCGTCTATTG CCACCACAAGCGACT vexD 4513877 - 4512573 - | VI polysaccharide export inner-membrane protein TERM 5977 4513802 - 4513816 + g 74 -7 -4.35885 | CCTCTTTTTGTTGTA GCCGCG AGG CTCGGC TTTCTTGTGCTACCT vexC 4514595 - 4513900 - | VI polysaccharide export ATP-binding protein TERM 5978 4513980 - 4513965 - G 95 -10.4 -4.59109 | GATATTGTTCAAAAA GCGCAG TTGC CTGCGC TAAATCTTCACACAT vexB 4515415 - 4514621 - | VI polysaccharide export inner-membrane protein (ABC-2 type transporter) TERM 5979 4515210 - 4515198 - G 74 -3.4 -4.89477 | CCTGCAATAACAAAA CTGA TATCG TCAG TGGATATTGGCACCG vexA 4516492 - 4515425 - | VI polysaccharide export protein TERM 5980 4516072 - 4516082 + g 81 -6.8 -4.82667 | GATTCAGGACAACGC GCGA AAG TCGC TTTTTGATCTCATCA TERM 5981 4516140 - 4516126 - G 85 -11.4 -3.98083 | opp_overlap 4516118, overlap 4516118 CATCCAATCCAGAAA CCGGGA TTG TCCCGG CATAAGGCACCTGAA tviE 4518273 - 4516537 - | VI polysaccharide biosynthesis protein TviE, glycosyl transferase group 1 TERM 5982 4516845 - 4516856 + g 76 -3 -5.00884 | opp_overlap 4516840 4516845 AACGCGAAAACAAAA TGAA TACA TTCA TTTTTTGCAGCCAAT TERM 5983 4516856 - 4516845 - G 76 -3 -5.10163 | opp_overlap 4516845, overlap 4516840 AACGCGAAAACAAAA TGAA TACA TTCA TTTTTTGCAGCCAAT insB 4518792 - 4518289 - | insertion element IS1 protein InsB insA 4518986 - 4518711 - | insertion element IS1 protein tviD 4521545 - 4519050 - | VI polysaccharide biosynthesis protein tviC 4522615 - 4521569 - | VI polysaccharide biosynthesis protein, epimerase tviB 4523895 - 4522618 - | VI polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase TERM 5984 4524148 - 4524132 - R 77 -3.7 -5.10461 | overlap 4524135 TTTACTCAATAAAAA TTACCGC ATT ACAGTAA AGTAACTGAATCCGG tviA 4524679 - 4524140 - | VI polysaccharide biosynthesis protein STY4663 4525220 - 4525408 + | hypothetical protein STY4664 4525533 - 4527044 + | putative DNA helicase TERM 5985 4527229 - 4527239 + G 73 -5.4 -4.67552 | opp_overlap 4527213 4527229, overlap 4527213 GCGCTACCTAAAGAG CGTT TTG AACG TTATTTTTTACTCCC TERM 5986 4527910 - 4527928 + G 76 -5.2 -4.7033 | GTCATGGTTGATGGA GGGCAGGA GAC TACTGTCC TTTTATCTTCCCTTG STY4665 4527028 - 4528617 + | hypothetical protein STY4666 4528781 - 4529794 + | phage integrase TERM 5987 4529824 - 4529847 + F 79 -11.1 -3.33696 | opp_overlap 4529824 GGGTGATCGAGAAAA GGGAACTTG CGCCAA CAAGTTCCC TTACTTGAGAAACCC TERM 5988 4529847 - 4529824 - f 100 -11.8 -4.42386 | opp_overlap 4529824 GGGTGATCGAGAAAA GGGAACTTGC GCCA ACAAGTTCCC TTACTTGAGAAACCC TERM 5989 4530347 - 4530328 - g 70 -2.9 -4.71061 | gap 1, overlap 4530330 AGCCAGAGGGAAAAA CT-GCACA GACTT TGTGCTAG AAGCTGCCCGCGCCG STY4667 4530221 - 4530514 + | hypothetical protein STY4668 4530511 - 4530999 + | hypothetical protein TERM 5990 4531166 - 4531140 - T 86 -13.2 -3.30007 | opp_overlap 4531140, overlap 4531147 AAGATCTGCGCACAA CCTCAAACATTA TTT TAATGCTTGAGG TTTGATTACAATTCA TERM 5991 4531140 - 4531166 + T 87 -11 -3.93369 | opp_overlap 4531140 4531147 AAGATCTGCGCACAA CCTCAAACATTA TTT TAATGCTTGAGG TTTGATTACAATTCA STY4669 4531631 - 4531179 - | hypothetical protein TERM 5992 4531692 - 4531675 - R 100 -9.9 -4.81814 | ATCATCAGAAGAAAA GCAGCTA CATG TAGCTGC CTATAGATATAAAGA TERM 5993 4532216 - 4532264 + r 100 -17.8 -3.19157 | gap 1, overlap 4532217 4532219 ACTTACGGTGTTTTG T-TGGCTCTCGCTAATTAACCCG ATCT CTGGTTAATTAGCGAGAGCTATA TTGCTAACGTTGGTG TERM 5994 4532217 - 4532262 + r 100 -22.9 -3.15574 | overlap 4532216 4532219 CTTACGGTGTTTTGT TGGCTCTCGCTAATTAACCCG ATCT CTGGTTAATTAGCGAGAGCTA TATTGCTAACGTTGG TERM 5995 4532219 - 4532260 + r 100 -23.3 -3.13639 | overlap 4532217 4532216 TACGGTGTTTTGTTG GCTCTCGCTAATTAACCCG ATCT CTGGTTAATTAGCGAGAGC TATATTGCTAACGTT STY4670 4534553 - 4532268 - | hypothetical protein TERM 5996 4533131 - 4533168 + g 74 -11.3 -3.18264 | gap 1, opp_overlap 4533135, overlap 4533136 TGGCTTCAACTTTAA TTGAGGCGAGTTCCG-GC CAG GCACGGTGCTCGCTTCGA TTCATACGTCCAGAA STY4671 4536307 - 4534634 - | hypothetical protein TERM 5997 4535112 - 4535100 - G 82 -5.5 -5.00616 | overlap 4535101 4535103 4535104 TCTTGCGTGAAAAAA CCAGC CGC GCTGA ACCGGCGCCAGAAAT TERM 5998 4536674 - 4536685 + H 93 -7.2 -5.74122 | opp_overlap 4536674 4536673 ATCGACGACACAAAG GCGC GTCT GCGC TTTTTTTGTGTCGTG STY4672 4536854 - 4537315 + | hypothetical protein cII 4537312 - 4537533 + | transcriptional regulatory protein TERM 5999 4537588 - 4537535 - T 100 -16.9 -3.93057 | gap 1 CTGAAAATTACTAAA TCGTC-TCTCCCGATCTTCTGATGGC TTT GCTGTCAGAAGATCGGGAGAAGGCAA GCGAAGCGCGGCAGT STY4674 4537710 - 4537567 - | hypothetical protein STY4675 4538252 - 4537926 - | hypothetical protein STY4676 4538390 - 4539172 + | hypothetical protein TERM 6000 4539206 - 4539253 + T 90 -10.8 -4.26344 | opp_overlap 4539223, overlap 4539211 4539212 4539223 ATGAGGTTATCCATC GGTTTTCGTACAAAAAATTTTG GGGG CAAAATTTTTTGTACGGTTTCC TTTTAATAACGATGT TERM 6001 4539211 - 4539248 + T 100 -16.7 -4.23781 | opp_overlap 4539223, overlap 4539206 4539212 4539223 GTTATCCATCGGTTT TCGTACAAAAAATTTTG GGGG CAAAATTTTTTGTACGG TTTCCTTTTAATAAC TERM 6002 4539212 - 4539247 + T 100 -18 -3.13546 | opp_overlap 4539223, overlap 4539211 4539206 4539223 TTATCCATCGGTTTT CGTACAAAAAATTTTG GGGG CAAAATTTTTTGTACG GTTTCCTTTTAATAA STY4677 4539409 - 4539197 - | hypothetical protein TERM 6003 4539236 - 4539223 - G 81 -3.9 -5.24129 | opp_overlap 4539223 4539212 4539211 4539206 TTTTCGTACAAAAAA TTTTG GGGG CAAAA TTTTTTGTACGGTTT TERM 6004 4539223 - 4539236 + g 81 -3.9 -5.28826 | opp_overlap 4539223, overlap 4539212 4539211 4539206 TTTTCGTACAAAAAA TTTTG GGGG CAAAA TTTTTTGTACGGTTT TERM 6005 4539650 - 4539687 + r 100 -14.5 -3.92324 | opp_overlap 4539660, overlap 4539651 4539660 AATATTGATAGATTT TCGTACAAAATTATTCT ACGT AGAATAATTTTGTACGC TTTCCTATTAACAAC TERM 6006 4539651 - 4539686 + r 100 -18 -2.95073 | opp_overlap 4539660, overlap 4539650 4539660 ATATTGATAGATTTT CGTACAAAATTATTCT ACGT AGAATAATTTTGTACG CTTTCCTATTAACAA TERM 6007 4539660 - 4539677 + r 72 -5.7 -4.44974 | opp_overlap 4539660, overlap 4539651 4539650 GATTTTCGTACAAAA TTATTCT ACGT AGAATAA TTTTGTACGCTTTCC TERM 6008 4539728 - 4539710 - R 79 -3.1 -5.37865 | TTAACAACCAAAAAA TGCAAGG TAATT CCTTTCA ATACAAAAAGCAGAT TERM 6009 4539738 - 4539764 + r 100 -10.2 -4.93365 | opp_overlap 4539738 CTTTCAATACAAAAA GCAGATTCGGAT TCA ATCAGGATCTGC TTTTTCATTATCAAC TERM 6010 4539764 - 4539738 - R 88 -8 -5.0916 | opp_overlap 4539738 CTTTCAATACAAAAA GCAGATTCGGAT TCA ATCAGGATCTGC TTTTTCATTATCAAC int 4540077 - 4539799 - | integrase (fragment) STY4679 4541343 - 4540153 - | hypothetical protein TERM 6011 4541505 - 4541542 + r 74 -8.7 -3.92592 | opp_overlap 4541516, overlap 4541506 4541516 TGTATTAATAGGTTT TCGTACAAAAATATTCT ACGT AGAATATTTTTGTAGGC TTTCCTATTAACAAT TERM 6012 4541506 - 4541541 + r 80 -12.2 -2.95073 | opp_overlap 4541516, overlap 4541505 4541516 GTATTAATAGGTTTT CGTACAAAAATATTCT ACGT AGAATATTTTTGTAGG CTTTCCTATTAACAA TERM 6013 4541516 - 4541531 + r 76 -4.8 -4.89393 | opp_overlap 4541516, overlap 4541506 4541505 GTTTTCGTACAAAAA TATTCT ACGT AGAATA TTTTTGTAGGCTTTC TERM 6014 4541531 - 4541516 - R 76 -4.8 -4.82901 | opp_overlap 4541516 4541506 4541505 GTTTTCGTACAAAAA TATTCT ACGT AGAATA TTTTTGTAGGCTTTC TERM 6015 4541619 - 4541593 - R 100 -13.8 -5.0916 | opp_overlap 4541593 CTTTCAATACAAAAA GCAGATCCGGAT TCA ATCAGGATCTGC TTTTTCATTATCAAC TERM 6016 4541593 - 4541619 + r 100 -13.8 -4.93365 | opp_overlap 4541593 CTTTCAATACAAAAA GCAGATCCGGAT TCA ATCAGGATCTGC TTTTTCATTATCAAC int 4542913 - 4541654 - | bacteriophage integrase TERM 6017 4542014 - 4541999 - G 80 -5.4 -4.86385 | opp_overlap 4541999 ACCCGCAAAAACAAA TACCGA CTCT CCGGTA ATTTCCTTTATCTGC TERM 6018 4543106 - 4543122 + r 73 -10.9 -2.62616 | opp_overlap 4543105 4543103 4543100 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yjdC 4543839 - 4543264 - | putative transcriptional regulator dipZ 4545579 - 4543876 - | thiol:disulfide interchange protein precursor TERM 6019 4544714 - 4544703 - G 81 -3.6 -5.18726 | opp_overlap 4544711, overlap 4544705 CCCCCATAACAAAAA CACC GCCG GGCG AGCCGCCTTGCTGAC TERM 6020 4545131 - 4545159 + g 71 -10.2 -3.17075 | opp_overlap 4545128, overlap 4545130 TGGGTGACAGCAGGC GTCGGCGTGGCG TCTAT TGCCGCGGCGAC TTCACTTAGCGGCAC TERM 6021 4545484 - 4545472 - G 74 -2.6 -5.02421 | overlap 4545474 AAAATCAAAAACAAA CGCC CGGTC GGCA GGGACGAACTGCGAG cutA 4545902 - 4545555 - | divalent-cation tolerance protein CutA TERM 6022 4546012 - 4545990 - R 93 -14.8 -3.30635 | overlap 4545991 CAAAGGGCGGGAGAA TGCGGGGCGT GAT ACGCCCCGCG GGTGAAACACTTACA TERM 6023 4546011 - 4545991 - R 100 -18.3 -2.5806 | overlap 4545990 AAAGGGCGGGAGAAT GCGGGGCGT GAT ACGCCCCGC GGGTGAAACACTTAC dcuA 4547324 - 4546023 - | anaerobic C4-dicarboxylate transporter TERM 6024 4547394 - 4547418 + r 95 -12.9 -3.79251 | opp_overlap 4547396, overlap 4547396 CTTCTTGTAAGAAAA AAGGCACGTCA TCG TGACGTGCCTC TTTGGTACTACCCTG TERM 6025 4547416 - 4547396 - R 100 -15.5 -5.4505 | opp_overlap 4547394 4547396 TCTTGTAAGAAAAAA GGCACGTCA TCG TGACGTGCC TCTTTGGTACTACCC TERM 6026 4547396 - 4547416 + r 100 -15.5 -3.48024 | opp_overlap 4547396, overlap 4547394 TCTTGTAAGAAAAAA GGCACGTCA TCG TGACGTGCC TCTTTGGTACTACCC aspA 4548875 - 4547439 - | aspartate ammonia-lyase TERM 6027 4548304 - 4548316 + g 74 -7.7 -4.13282 | overlap 4548295 ACGGCGTCCTGCAAC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 6028 4548739 - 4548754 + g 74 -3.2 -4.92757 | opp_overlap 4548739, overlap 4548734 ATGCCACGCACAAAT TCAGGG ATGT CGCTGA TTTTGTTATTGCTAA STY4686 4549030 - 4548908 - | hypothetical protein TERM 6029 4549196 - 4549178 - H 76 -8.8 -3.66874 | opp_overlap 4549178 GCAACCCCATTTAAA TGGTCGTC GCA GACGGCCA TGACTTACAGGAGAG TERM 6030 4549178 - 4549196 + H 73 -11 -2.52464 | opp_overlap 4549178 GCAACCCCATTTAAA TGGTCGTC GCA GACGGCCA TGACTTACAGGAGAG TERM 6031 4549367 - 4549377 + G 72 -4 -4.77036 | TGGTACGTAACCAGG GTTT TAA AAAC TTTTTGCTGATGCAA TERM 6032 4549399 - 4549377 - g 75 -6.4 -4.57569 | overlap 4549378 CCAGGGTTTTAAAAA CTTTTTGCTG ATG CAACAAAAAA TGGCGGCCGGTGAGA TERM 6033 4549425 - 4549400 - g 85 -2.5 -5.4833 | gap 1, overlap 4549401 4549402 TGATGCAACAAAAAA TGGCGGCCGG TGAGAGC CCGGCGGC-A GAAATGATTAAGAGT TERM 6034 4549469 - 4549482 + G 71 -4.5 -4.61527 | overlap 4549478 TCGCTGGCTTACTGC TCCTG TTGC CGGGA TTTTTCACCGATTTT fxsA 4549216 - 4549692 + | FxsA yjeH 4550992 - 4549751 - | inner membrane protein YjeH TERM 6035 4551110 - 4551122 + H 74 -3.3 -5.08824 | opp_overlap 4551110 AACGTGAGATAAGTA GCGTT TTT ACCGC TTTTTTCGCTCAGAA groES 4551268 - 4551561 + | co-chaperonin GroES TERM 6036 4552616 - 4552588 - g 74 -9.5 -3.72374 | overlap 4552586 TGTGATCAACAAAGA CACCACCACCATC ATT GATGGCGTGGGTG AAGAAGCTGCCATCC groEL 4551605 - 4553251 + | chaperonin GroEL TERM 6037 4553388 - 4553423 + F 100 -18.4 -4.37971 | opp_overlap 4553394, overlap 4553394 TTATCTCCCAGAATT GAGAAACCCCCGGGCA GAAA TGACCGGGGGTTTTTC TTTTAGTCATCTTTT TERM 6038 4553394 - 4553417 + F 100 -13.8 -5.50723 | opp_overlap 4553394, overlap 4553388 CCCAGAATTGAGAAA CCCCCGGGCA GAAA TGACCGGGGG TTTTTCTTTTAGTCA TERM 6039 4553417 - 4553394 - f 100 -13.8 -4.00066 | opp_overlap 4553394 4553388 CCCAGAATTGAGAAA CCCCCGGGCA GAAA TGACCGGGGG TTTTTCTTTTAGTCA yjeI 4553477 - 4553848 + | hypothetical protein TERM 6040 4553851 - 4553901 + T 100 -10.7 -4.7373 | gap 2, overlap 4553853 4553862 4553864 ATGTCCGAATTGACA TGTCTGAATCGTAACGCCCTCTGAA AGA TTCAGAGGGCGATATGGTT-AG-CG TTTTTCCTGCGATGA TERM 6041 4553853 - 4553900 + T 85 -12.2 -3.43756 | gap 1, overlap 4553851 4553862 4553864 GTCCGAATTGACATG TCTGAATCGTAACGCCCTCTGAA AGA TTCAGAGGGCGATATGGTT-AGC GTTTTTCCTGCGATG TERM 6042 4553862 - 4553892 + T 100 -17 -2.79809 | overlap 4553853 4553851 4553864 GACATGTCTGAATCG TAACGCCCTCTGAA AGA TTCAGAGGGCGATA TGGTTAGCGTTTTTC TERM 6043 4553864 - 4553890 + T 93 -15.2 -2.93361 | overlap 4553862 4553853 4553851 CATGTCTGAATCGTA ACGCCCTCTGAA AGA TTCAGAGGGCGA TATGGTTAGCGTTTT yjeJ 4554753 - 4553896 - | hypothetical protein TERM 6044 4554458 - 4554475 + g 74 -7.7 -4.14472 | opp_overlap 4554458 4554456 GCTAAAGATTCAACA CGCTGAT TAAC ATCGGCG TTTTCCAGCTCTTCA TERM 6045 4554989 - 4555003 + r 71 -3.6 -4.77438 | GGAATCTCCTCGTGA TATTGC GCG GTAATA TTTTTCGTCGTCCCT yjeK 4556063 - 4555035 - | hypothetical protein TERM 6046 4555622 - 4555641 + g 74 -10 -3.75598 | CGGCGATATACTCCA GCGCGACT GTCC AGTTGCGC TTATTGCCTTGATTC TERM 6047 4555903 - 4555891 - G 78 -6.9 -4.63486 | overlap 4555892 4555893 ATGCGCGCAATAAAA GCGCG CGG CACGC GGAGGGCAAACAAGC efp 4556104 - 4556670 + | elongation factor P TERM 6048 4556690 - 4556711 + F 80 -12.3 -3.01831 | opp_overlap 4556690, overlap 4556687 4556685 CGTTATCGGGAAAAA TGGTGCAGC GTAT GCTGCGCCA TCCTATTTTTCGCGC TERM 6049 4556711 - 4556690 - f 93 -10.1 -4.59773 | opp_overlap 4556690 4556687 4556685 CGTTATCGGGAAAAA TGGTGCAGC GTAT GCTGCGCCA TCCTATTTTTCGCGC ecnA 4556731 - 4556865 + | entericidin A precursor TERM 6050 4557057 - 4557043 - g 72 -11.4 -3.02461 | overlap 4557046 TAACTGCTTGTAATA CCACGC GCG GCGTGG GCGAGGACATCTCGG ecnB 4556973 - 4557119 + | entericidin B membrane lipoprotein TERM 6051 4557120 - 4557157 + T 79 -8.6 -4.36914 | gap 1, opp_overlap 4557123 4557127, overlap 4557127 AGAGCTCAGCAGTAA TC-ATCAACGGTACGGC ATGGC GTCGTACCGTTAATCGA TTTTCTCCGGAAGCA TERM 6052 4557153 - 4557123 - T 74 -11.2 -2.80016 | opp_overlap 4557120 4557127, overlap 4557127 GCTCAGCAGTAATCA TCAACGGTACGGCA TGG CGTCGTACCGTTAA TCGATTTTCTCCGGA TERM 6053 4557149 - 4557127 - T 71 -9.8 -3.29364 | opp_overlap 4557120 4557127, overlap 4557123 AGCAGTAATCATCAA CGGTACGGCA TGG CGTCGTACCG TTAATCGATTTTCTC TERM 6054 4557127 - 4557149 + T 77 -11.3 -3.28857 | opp_overlap 4557127 4557123, overlap 4557120 AGCAGTAATCATCAA CGGTACGGC ATGGC GTCGTACCG TTAATCGATTTTCTC ecnR 4557737 - 4557150 - | transcriptional regulatory protein sugE 4557993 - 4558310 + | quaternary ammonium compound-resistance protein SugE blc 4558860 - 4558327 - | outer membrane lipoprotein Blc TERM 6055 4558393 - 4558404 + g 83 -5.8 -4.93877 | overlap 4558378 CCGGGTCGCGACGGC CAGC ATTT GCTG TTTTATTTCCTCAGA TERM 6056 4558840 - 4558822 - G 100 -8.8 -4.93365 | overlap 4558833 GGCGACAACCAAAAA TGCCGCAG TAA CCGCAGCA ACGACGGGCAGCAAG TERM 6057 4558961 - 4558933 - R 100 -11.8 -5.83211 | overlap 4558934 CAGGAAAAGAAAAAA TGCCCTCTTATC GGGTA GATAAGAGGGCG TCGTGGCAACTTAGA TERM 6058 4558960 - 4558934 - R 100 -15.3 -4.07486 | overlap 4558933 AGGAAAAGAAAAAAT GCCCTCTTATC GGGTA GATAAGAGGGC GTCGTGGCAACTTAG frdD 4559331 - 4558972 - | fumarate reductase subunit D TERM 6059 4559198 - 4559180 - G 70 -6.6 -4.08945 | overlap 4559181 4559184 AGTACGCGCTCAAAA CTCAGGGC ATC GCCCGGAA ATAGCCCCAGCGGCA TERM 6060 4559261 - 4559229 - G 76 -12.7 -2.74012 | GCATGATGCCAACCA GTAGCACGATCACCG GCG CGATGATCGCGCCCC ACATACCGCCTGCGC frdC 4559737 - 4559342 - | fumarate reductase subunit C frdB 4560482 - 4559748 - | fumarate reductase iron-sulfur subunit frdA 4562265 - 4560475 - | fumarate reductase flavoprotein subunit yjeA 4562588 - 4563565 + | lysyl-tRNA synthetase TERM 6061 4563612 - 4563596 - f 70 -5.1 -4.52589 | opp_overlap 4563596 TTTCGCGAGATAAAA TGGCG AAATAAG CGCCA TTTTGTAGCATATTT TERM 6062 4563596 - 4563612 + F 70 -5.1 -4.43221 | opp_overlap 4563596 TTTCGCGAGATAAAA TGGCG AAATAAG CGCCA TTTTGTAGCATATTT TERM 6063 4563832 - 4563811 - g 90 -4.4 -5.34555 | opp_overlap 4563816 CCACACGATAAAAAA GATGAGCC TTATTG GGCTTATC CTGATGATTTTTACT TERM 6064 4563924 - 4563934 + G 85 -2.4 -5.5074 | CGTGGTATATATTTT CTGC CTT GCTG TTTTTTATTCCATTC TERM 6065 4564317 - 4564331 + G 80 -5 -4.91084 | ATTTAGTTTTATTGT TAGTGA GTG TCGCTA TTTTGTTATTAAATG TERM 6066 4565197 - 4565212 + G 73 -9 -3.82824 | CAGCGCCTTGTGGAT GATCGG CGGC CCGATC TTCTTCTCGCTGCTG yjeM 4563791 - 4565293 + | putative amino acid permease TERM 6067 4565302 - 4565334 + G 91 -11.9 -4.19678 | opp_overlap 4565295 4565312, overlap 4565303 GGAGTAAAGGCCGTA TGCCGGATAAGGCCC CAC GGGTCGCATCCGGCG TTTATTGCCCTATGG TERM 6068 4565303 - 4565333 + G 84 -13.2 -3.11325 | opp_overlap 4565295 4565312, overlap 4565302 GAGTAAAGGCCGTAT GCCGGATAAGGCCC CAC GGGTCGCATCCGGC GTTTATTGCCCTATG yjeN 4565301 - 4565678 + | hypothetical protein TERM 6069 4565762 - 4565794 + T 73 -7.5 -4.1552 | opp_overlap 4565749 4565772 4565774, overlap 4565763 AATTGTCGGCCCGTA GGCCGGATAAGACCC GAC GGGGCGCATCCGGCA TTTCTTGCCGGGATC TERM 6070 4565763 - 4565793 + T 75 -11 -3.08991 | opp_overlap 4565749 4565772 4565774, overlap 4565762 ATTGTCGGCCCGTAG GCCGGATAAGACCC GAC GGGGCGCATCCGGC ATTTCTTGCCGGGAT yjeP 4569141 - 4565815 - | hypothetical protein TERM 6071 4566331 - 4566346 + g 80 -9 -4.07885 | AATGGTCACCGTATC GCCGAT ACGA ATCGGC TTTTCAAACAAAATA TERM 6072 4567179 - 4567191 + g 100 -10.5 -5.03314 | opp_overlap 4567177 4567175 4567173 4567179 CTTTATCAAGATAGA GCGGG ATG CCCGC TTTTTTCAGACTCAG TERM 6073 4568658 - 4568704 + g 79 -7.3 -4.4261 | CGGCACTTCCGCCTG CGGCGCCGAGTCGTC-GCTCAAT CTC ATTAAGCTGGCGGCG-GGCGTCG TTTTGCTGTTGGGGA psd 4570128 - 4569160 - | phosphatidylserine decarboxylase yjeQ 4571272 - 4570220 - | ribosome-associated GTPase orn 4571379 - 4571924 + | oligoribonuclease TERM 6074 4571968 - 4571934 - T 75 -11.5 -3.04144 | gap 1 CTGTGAGGCGTAACA TGCCGGATGGCAACGC CAGA GCGTCTC-ATCCGGCA GCTCTCCCGCCACTG artJ 4572705 - 4571986 - | arginine-binding periplasmic protein TERM 6075 4573043 - 4573027 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6076 4573275 - 4573259 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA yjeS 4574732 - 4573578 - | putative 4Fe-4S binding protein TERM 6077 4575060 - 4575082 + GH 73 -11.3 -2.58822 | overlap 4575043 4575059 4575057 TGCCTGGCTGAATGC CGGCGGCAT TATCC ATGCTGCCG ATATTATCTGGCCGG TERM 6078 4575398 - 4575410 + GH 87 -10.5 -4.07568 | TGGCGAGCCAGACGC CGCCG CTC CGGCG TTTTGACGCGACGCA yjeF 4574716 - 4576263 + | hypothetical protein TERM 6079 4576436 - 4576413 - gf 72 -3.8 -4.74504 | ACGGTAATGTAAAAA GCCCCACC TATACGCT GGTAGAGC CTTATGCGCTTGATA yjeE 4576235 - 4576696 + | putative ATPase TERM 6080 4576979 - 4576963 - g 83 -7.9 -4.60255 | ACAATCTGGTAAAAA CGATCCG TGC CGGAACG CCGAAAGATGCGCAA amiB 4576713 - 4578032 + | N-acetylmuramoyl-l-alanine amidase II TERM 6081 4578094 - 4578082 - g 73 -9.1 -3.90291 | opp_overlap 4578088 AGCTTGCGAACCAAA TCGCC GCT GGCGA AGTGGTGGAACGCCC TERM 6082 4578264 - 4578237 - g 79 -3.2 -5.14563 | overlap 4578240 TGCGGCATTAAAAAA GAGGAGCTGGCG CTGG CGCTGGCCCGTC ATGCCACCAGTAAAA TERM 6083 4578683 - 4578666 - g 71 -4.8 -4.60889 | gap 1, overlap 4578668 AAGGACGGGCAAAAA GAGCGCC GGTTA GGCGC-C ATCTGCGGCACGCCG TERM 6084 4578682 - 4578668 - g 71 -8.5 -3.91506 | overlap 4578666 GGACGGGCAAAAAGA GCGCC GGTTA GGCGC CATCTGCGGCACGCC mutL 4578042 - 4579898 + | DNA mismatch repair protein miaA 4579891 - 4580841 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 6085 4580952 - 4580979 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4580951 4580948, overlap 4580945 AATCTTTACAAGATC CGTTCCTGAACGC ATT GCGT-CGGGAACG TGTTCCAGTTTCTAT hfq 4580924 - 4581232 + | RNA-binding protein Hfq TERM 6086 4582049 - 4582076 + G 74 -10.6 -3.60805 | TCGGTGAAACCGTTC TGGCGGATACGG TAGG CTTTATCCGCCA TTTACCGTACGATCT TERM 6087 4582349 - 4582312 - g 70 -5 -4.4768 | gap 3, opp_overlap 4582343 GATGAAGAGAATAAA CCCA-TCCGCGTTTG-GCT TTC AGCGCAAA-GCGGCGTGGG AATACCACAGCTTTT TERM 6088 4582400 - 4582415 + G 76 -10.4 -3.72576 | overlap 4582399 TTTCCGGCGAGGTGG CGCAGC ATAC GCTGCG TTTGCTGCCGCAGGA hflX 4581304 - 4582584 + | putative GTPase HflX TERM 6089 4583116 - 4583105 - g 71 -7.2 -4.03811 | opp_overlap 4583104 4583105 4583111 4583115 TATACCATTAAAGAA GCCG AGCG CGGC GTTGTGACGCGTTTT TERM 6090 4583111 - 4583127 + G 71 -5.7 -4.30978 | opp_overlap 4583105, overlap 4583105 4583104 4583115 ATTAAAGAAGCCGAG CGCGGCG TTG TGACGCG TTTTGGTAAATTCAG TERM 6091 4584030 - 4584011 - g 83 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC GAAT GCGCAGCG TAACGACTACCAGCG hflK 4582799 - 4584058 + | FtsH protease regulator HflK TERM 6092 4584142 - 4584158 + G 77 -7.2 -4.28762 | GTCAAAGAGGGCGAG CGCGGC ATTAC GCTGCG TTTTGGTAAAGTTCT hflC 4584061 - 4585065 + | FtsH protease regulator HflC TERM 6093 4585091 - 4585126 + F 100 -14.2 -4.37092 | gap 1, opp_overlap 4585096, overlap 4585096 GCGGTTTTAGACCAG CAAAACCACCG-CATCC AAA GGATGCCGGTGGTTTTC TTTTATAAGGGCGAT TERM 6094 4585096 - 4585121 + F 100 -14.1 -5.18371 | gap 1, opp_overlap 4585096, overlap 4585091 TTTAGACCAGCAAAA CCACCG-CATCC AAA GGATGCCGGTGG TTTTCTTTTATAAGG TERM 6095 4585121 - 4585096 - f 100 -14.1 -4.33274 | gap 1, opp_overlap 4585096 4585091 TTTAGACCAGCAAAA CCACCG-CATCC AAA GGATGCCGGTGG TTTTCTTTTATAAGG yjeT 4585144 - 4585341 + | hypothetical protein TERM 6096 4585814 - 4585804 - g 71 -8.2 -3.86194 | overlap 4585791 4585805 AACGCGCGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 6097 4585959 - 4585927 - g 73 -5.6 -4.56775 | opp_overlap 4585927 4585949, overlap 4585950 ACCTTTGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4585444 - 4586742 + | adenylosuccinate synthetase TERM 6098 4586756 - 4586779 + F 78 -11.8 -2.95298 | gap 1 AATTGATGGATGATG CCCGGTAACGC TAC GC-TTACCGGG TCTATGATGAGTACG TERM 6099 4587161 - 4587147 - g 86 -7 -5.00616 | overlap 4587148 CGTTCGGGGAAAAAA TGGCGG TAT CCGCCT GGGTAAACCGGCTAA TERM 6100 4587160 - 4587148 - g 74 -10.5 -3.60048 | overlap 4587147 GTTCGGGGAAAAAAT GGCGG TAT CCGCC TGGGTAAACCGGCTA yjeB 4586962 - 4587387 + | transcriptional repressor NsrR TERM 6101 4587549 - 4587524 - g 81 -6.8 -4.71482 | overlap 4587525 ACGAAACGTGAAAAA CCGGCCAGTC GCGAAG AACTGGCCGT AGAACTGAATATTGA TERM 6102 4587548 - 4587525 - g 73 -10.3 -3.41804 | overlap 4587524 CGAAACGTGAAAAAC CGGCCAGTC GCGAAG AACTGGCCG TAGAACTGAATATTG TERM 6103 4589685 - 4589671 - g 76 -2.7 -4.99134 | AGGTGAAAGTAAAAA CGCCG GTAAA CGTCG TCAGGTAGGTAAAAA TERM 6104 4589825 - 4589811 - g 71 -4.2 -4.54477 | overlap 4589813 CTAAAACGCAGAAAA TAGCCG CAG CGACCA AAGCGAAGCGTGCGG rnr 4587425 - 4589863 + | exoribonuclease R TERM 6105 4589870 - 4589890 + F 73 -11.2 -2.64877 | opp_overlap 4589868 4589870, overlap 4589868 4589867 GCAGAGTGAGCAATA CCCTCTTC AAACA GAAGAGGG TCAATTATCTGTAGG TERM 6106 4589890 - 4589870 - f 77 -11.2 -3.16492 | opp_overlap 4589870 4589868 4589867, overlap 4589868 GCAGAGTGAGCAATA CCCTCTTC AAACA GAAGAGGG TCAATTATCTGTAGG TERM 6107 4590073 - 4590098 + G 74 -11.1 -3.31144 | overlap 4590074 TCTGTTGCCGCTGAT TCACGCCCTTG AGTC CCAGGGCGTGG TTATCCAGCTGGCAA TERM 6108 4590074 - 4590097 + G 72 -12.4 -2.58544 | overlap 4590073 CTGTTGCCGCTGATT CACGCCCTTG AGTC CCAGGGCGTG GTTATCCAGCTGGCA TERM 6109 4590168 - 4590138 - g 73 -6 -4.4648 | opp_overlap 4590138 4590145 ATCTCGACGAGAAAA GCGACGGTGCCGTG CAT CAGGGCATTATCGC TCGTGTGAAACCAGG yjfH 4589954 - 4590685 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 6110 4590702 - 4590739 + F 90 -13.8 -3.42663 | opp_overlap 4590697 4590712, overlap 4590712 GCTAATAGTATTTTT TAAGAAAAAACCATCC ATAATC GGATGGTTTTTTTTTA TCTTTGGCTGGTAAT TERM 6111 4590712 - 4590729 + F 100 -7 -6.38655 | opp_overlap 4590712, overlap 4590702 TTTTTTAAGAAAAAA CCATCC ATAATC GGATGG TTTTTTTTTATCTTT TERM 6112 4590729 - 4590712 - f 95 -7.7 -5.4505 | opp_overlap 4590712 4590702 TTTTTTAAGAAAAAA CCATCCA TAAT CGGATGG TTTTTTTTTATCTTT TERM 6113 4590903 - 4590888 - g 71 -4.8 -4.61868 | TATTGATATAGAAAA TAATGA ATCT TCATTA ATAATAAAAATGAAT yjfI 4590817 - 4591221 + | hypothetical protein TERM 6114 4591987 - 4592008 + F 71 -7.9 -3.86524 | gap 1, overlap 4591989 TTTGTCCAGACTGAC CTGGCCC-GC TTT GCTGGGCCTG TTTATCGGGCAGTAT TERM 6115 4591989 - 4592006 + F 72 -9.1 -3.52113 | gap 1, overlap 4591987 TGTCCAGACTGACCT GGCCC-GC TTT GCTGGGCC TGTTTATCGGGCAGT TERM 6116 4592577 - 4592589 + G 100 -9.1 -5.03314 | opp_overlap 4592576 4592575 CAACTGGCAAGAACG GCGCT GGC AGCGC TTTTTTAACCATGAA yjfK 4592158 - 4592841 + | hypothetical protein yjfL 4592859 - 4593257 + | hypothetical protein yjfM 4593267 - 4593905 + | hypothetical protein yjfC 4593908 - 4595071 + | hypothetical protein TERM 6117 4595500 - 4595514 + G 72 -3.5 -4.68724 | gap 1, opp_overlap 4595484, overlap 4595499 4595500 GGCGGGAAGTTTTGT CGC-CC GGGC GGCGCG TTTTGTATTACATGC TERM 6118 4596084 - 4596094 + G 70 -6.8 -4.18762 | GGAGTCATGGCTTAA TGCG GCG CGCA TTTTCAGTCGCCATT aidB 4595138 - 4596778 + | isovaleryl CoA dehydrogenase yjfN 4597146 - 4596823 - | hypothetical protein yjfO 4597558 - 4597229 - | hypothetical protein TERM 6119 4598451 - 4598470 + G 71 -4.2 -4.56775 | opp_overlap 4598451 GCATTACGCCAGAAG CGTTGTCG GCGA CGGTAGCG TTTTTCCGACAGCAT yjfP 4597742 - 4598491 + | esterase yjfQ 4599243 - 4598488 - | transcriptional repressor UlaR TERM 6120 4599075 - 4599090 + g 85 -4.6 -5.2696 | overlap 4599076 GTTGGGTAATGGCCT CTGCGC CGTT GCGCAC TTTTTTAAGTTTTCC TERM 6121 4599320 - 4599337 + r 78 -12.7 -2.63596 | opp_overlap 4599320 AGTAAATGGAAAAAA TGCCGGG TAAT CCCGGCA TGATATCGACTCACA TERM 6122 4599337 - 4599320 - R 100 -12.7 -5.22943 | opp_overlap 4599320 AGTAAATGGAAAAAA TGCCGGG TAAT CCCGGCA TGATATCGACTCACA yjfR 4600412 - 4599348 - | putative L-ascorbate 6-phosphate lactonase ulaA 4600775 - 4602172 + | ascorbate-specific PTS system enzyme IIC sgaB 4602188 - 4602493 + | L-ascorbate-specific enzyme IIB component of PTS sgaA 4602503 - 4602967 + | L-ascorbate-specific enzyme IIA component of PTS TERM 6123 4603637 - 4603605 - g 81 -11.9 -3.60627 | opp_overlap 4603603 GCACGGCAGTTCAAA CGCTCCATTGCCCAA CTG TGGGGCTAAGGAGCG GCTATGCTGTCGAAA ulaD 4602981 - 4603631 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 6124 4603700 - 4603680 - g 90 -8.2 -4.7497 | GGCATCTATGAAAAA GCGCTCCC TGCCG GGGAGTGC TGGCTGGAACGCCTG sgaU 4603641 - 4604495 + | L-xylulose 5-phosphate 3-epimerase sgaE 4604495 - 4605181 + | L-ribulose-5-phosphate 4-epimerase TERM 6125 4605274 - 4605256 - T 100 -8.8 -5.00616 | overlap 4605257 CTTTCCGCGAAAAAA GCCCCC TGTTCAG GGGGGC AAATCAACTATGGCT TERM 6126 4605272 - 4605257 - T 79 -10.4 -3.60048 | overlap 4605256 TTTCCGCGAAAAAAG CCCCCT GTTC AGGGGG GCAAATCAACTATGG yjfY 4605586 - 4605311 - | hypothetical protein STY4746 4605780 - 4605986 + | hypothetical protein rpsF 4606057 - 4606452 + | 30S ribosomal protein S6 priB 4606459 - 4606773 + | primosomal replication protein N rpsR 4606778 - 4607005 + | 30S ribosomal protein S18 rplI 4607047 - 4607496 + | 50S ribosomal protein L9 TERM 6127 4607522 - 4607552 + F 100 -9.7 -5.09895 | opp_overlap 4607523 4607528, overlap 4607523 TCGTTTTTGCTAGCA ACGAAACGTCGGC CCAGC GCCGGCGTTTTGC TTTTTTAACTCCATC TERM 6128 4607523 - 4607551 + F 90 -13.2 -3.65214 | opp_overlap 4607523 4607528, overlap 4607522 CGTTTTTGCTAGCAA CGAAACGTCGGC CCAGC GCCGGCGTTTTG CTTTTTTAACTCCAT TERM 6129 4607627 - 4607613 - f 70 -2.2 -4.93365 | CGCGATAATTAAAAA TAAAAC ATT ATTTTA ATTTCTTGGTGAAAG TERM 6130 4607696 - 4607706 + G 70 -3.2 -4.69053 | AAAACGTCGTTTATG TGTG TGC CGCA TTTTGTTGCCTGCTA STY4751 4607644 - 4608570 + | hypothetical protein TERM 6131 4608579 - 4608558 - T 79 -10.2 -3.61398 | TTGGTGGGTGAATAA GGTGAAGC GGTAAT GCTTCACC TGAACGAATAGGGTA ytfB 4609255 - 4608620 - | hypothetical protein TERM 6132 4609419 - 4609446 + H 79 -4 -5.21709 | gap 1, opp_overlap 4609422, overlap 4609422 AAAGTTTTACCAGAA GAAGCGTGGCTGT TAT GCTGCC-CGCTAC TTTTTTGATATCCGA fklB 4609475 - 4610095 + | peptidyl-prolyl cis-trans isomerase TERM 6133 4610104 - 4610144 + F 95 -17 -2.52676 | gap 1, overlap 4610119 TCTGTAAGCGCCCCG GGTTTGCCGGATGATGGCG TAAA CGCC-TTATCCGGCAACCC TGACTTCAGCAGATG TERM 6134 4610420 - 4610409 - g 71 -5.8 -4.22652 | GTAGATCAGGTAAAA GTCG CAGC CGAC GAACAGGCTCCGGCT TERM 6135 4611135 - 4611120 - g 73 -5.4 -4.62904 | gap 1 AAAGATCCGGAAAAA TCGCTGC CGC GC-GCGA TCAACTCAATACCGA cycA 4610391 - 4611794 + | D-alanine/D-serine/glycine permease TERM 6136 4613234 - 4613208 - g 71 -10.8 -3.16071 | overlap 4613206 4613204 CCCGATATTAACAGA GTGGACGACGGT ATC ACCAGCGCCCAC TGACGTTATCTCTTT STY4755 4612132 - 4613271 + | hypothetical protein TERM 6137 4613677 - 4613654 - g 73 -6 -4.46581 | GAAAATCGTACAAAA TCCACCGG GTAAGCCG CCAGTGGA TGCAGCGACTTTTCG TERM 6138 4613993 - 4614012 + G 90 -5.7 -5.15167 | overlap 4613994 CCCGTGGGACACTAT TCTGCGT ACCGCC ACGCAGG TTTTTGTTAATGGTG STY4756 4613286 - 4614674 + | hypothetical protein TERM 6139 4614729 - 4614696 - T 73 -9.8 -3.36327 | opp_overlap 4614700, overlap 4614700 TTAGTCGATTCAGAA TAAACGATCCTG TCTATGCGTT CAGGATCGTTTA TTGGCGATGGATTAT TERM 6140 4614725 - 4614700 - T 72 -6.2 -4.33417 | opp_overlap 4614700, overlap 4614696 TCGATTCAGAATAAA CGATCCTG TCTATGCGTT CAGGATCG TTTATTGGCGATGGA ytfE 4615403 - 4614741 - | cell morphogenesis/cell wall metabolism regulator TERM 6141 4614990 - 4615004 + g 74 -8.6 -4.03811 | overlap 4614981 CTGTTTGATCATGGG GAACAG GAT CTGTTC TTCTTTCATCATATG TERM 6142 4615516 - 4615535 + r 80 -7.1 -4.70879 | opp_overlap 4615509, overlap 4615520 TGAGATTAGCGTTCC GTGACCG GAACGA CGGTCGC TTTTTCCGGTTTCGC ytfF 4616471 - 4615506 - | hypothetical protein ytfG 4617400 - 4616552 - | hypothetical protein TERM 6143 4617261 - 4617289 + g 77 -3.6 -5.09426 | overlap 4617267 TCCGCCTGGCGAACG GCAATCCCGCGC TGACT GAGCGGGGCGGC TTTTTTCGGGTTACG ytfH 4617488 - 4617874 + | hypothetical protein TERM 6144 4617918 - 4617865 - T 100 -19.3 -2.78816 | gap 3 GGAGCGTTTATCAGA TGGCGGCTAGCGCTTTATTCGGCCTG CCAGT CAGGCCGAATAAA-CGC-AGC-GCCA TACGGGACTCACGTT cpdB 4619875 - 4617932 - | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein cysQ 4620142 - 4620882 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase ytfJ 4621429 - 4620872 - | hypothetical protein ytfK 4621690 - 4621962 + | hypothetical protein TERM 6145 4622026 - 4622002 - T 100 -9.9 -4.88646 | opp_overlap 4622005, overlap 4622004 4622005 AAAAAGTAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCTGATGCGCCTGT TERM 6146 4622024 - 4622004 - T 95 -12.5 -4.00914 | opp_overlap 4622005, overlap 4622002 4622005 AAAGTAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCTGATGCGCCT TERM 6147 4622023 - 4622005 - T 93 -16 -2.98108 | opp_overlap 4622005, overlap 4622004 4622002 AAGTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC TERM 6148 4622005 - 4622023 + T 100 -16 -4.91109 | opp_overlap 4622005 4622004 4622002 AAGTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCTGATGCGCC tnpA 4622563 - 4622105 - | transposase for insertion sequence element is200 TERM 6149 4622676 - 4622694 + r 100 -16 -4.18018 | opp_overlap 4622666 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAC TERM 6150 4622711 - 4622743 + r 77 -9.1 -3.85698 | opp_overlap 4622717, overlap 4622713 4622717 TTTCCATAGACAACA AAAAAACGGCTCCTG AAT CAGGAGCCGTTGATG TTTCTGGCAAACGGA TERM 6151 4622713 - 4622741 + r 86 -11.7 -3.51934 | opp_overlap 4622717, overlap 4622711 4622717 TCCATAGACAACAAA AAAACGGCTCCTG AAT CAGGAGCCGTTGA TGTTTCTGGCAAACG TERM 6152 4622737 - 4622717 - R 100 -16.9 -5.9218 | opp_overlap 4622713 4622711 4622717 TAGACAACAAAAAAA CGGCTCCTG AAT CAGGAGCCG TTGATGTTTCTGGCA TERM 6153 4622717 - 4622737 + r 100 -16.9 -3.50335 | opp_overlap 4622717, overlap 4622713 4622711 TAGACAACAAAAAAA CGGCTCCTG AAT CAGGAGCCG TTGATGTTTCTGGCA ytfL 4624104 - 4622761 - | hypothetical protein TERM 6154 4622805 - 4622819 + g 70 -3.4 -4.77165 | overlap 4622788 CATCGGGCAGTTTCG GCGCCG GTA CGTTGC TTTTATTGTCGAGAC TERM 6155 4624197 - 4624176 - R 70 -5.1 -4.41895 | opp_overlap 4624176, overlap 4624177 AACGTTTAATGAAAA CCGGCTC GTAGCAGT GAGCCGA TAAGTTCAGGGCTAG msrA 4624946 - 4624308 - | methionine sulfoxide reductase A TERM 6156 4624904 - 4624925 + g 90 -5.9 -5.26316 | opp_overlap 4624906, overlap 4624889 4624895 TGCGTCCTGGTAACG CATCTGCTT GAGT AACCAGATG TTTTTTATCAAATAA TERM 6157 4626042 - 4626023 - g 80 -4.3 -5.00616 | gap 1 GCGTCGTGGAAAAAA CCGT-GGA TGAAC TCCTACGG TCATAGCCTGACCAC ytfM 4625159 - 4626892 + | hypothetical protein TERM 6158 4627423 - 4627389 - g 100 -10.6 -4.91511 | overlap 4627390 ATGGCAGGAGAAAAA CCTGACCCTGAAACCG ACG CGGCTTCAGGGACTGC TGATCGCGCTGCCGA TERM 6159 4627422 - 4627390 - g 95 -14.1 -3.54183 | overlap 4627389 TGGCAGGAGAAAAAC CTGACCCTGAAACCG ACG CGGCTTCAGGGACTG CTGATCGCGCTGCCG ytfN 4626889 - 4630668 + | hypothetical protein ytfP 4630671 - 4631015 + | hypothetical protein TERM 6160 4631022 - 4631044 + T 100 -9.9 -5.1925 | gap 1, opp_overlap 4631022 4631024, overlap 4631024 CAGCCCTGAACTGAA CA-CGCCACC CTCG GGTGGCGTTG TTTTTTACATTCTGG TERM 6161 4631043 - 4631022 - T 71 -10.1 -3.17392 | opp_overlap 4631022 4631024, overlap 4631024 CAGCCCTGAACTGAA CACGCCACC CTCG GGTGGCGTT GTTTTTTACATTCTG TERM 6162 4631024 - 4631041 + T 100 -12.7 -4.67173 | opp_overlap 4631022 4631024, overlap 4631022 GCCCTGAACTGAACA CGCCACC CTCG GGTGGCG TTGTTTTTTACATTC TERM 6163 4631041 - 4631024 - T 81 -12.7 -3.14878 | opp_overlap 4631024 4631022, overlap 4631022 GCCCTGAACTGAACA CGCCACC CTCG GGTGGCG TTGTTTTTTACATTC STY4771 4632277 - 4631069 - | putative sugar transporter TERM 6164 4631211 - 4631190 - G 71 -4.3 -4.56597 | overlap 4631192 GTTGTCCGGTAAAAA TAGCCGACC ATTA GGCCTGCCA ACGTACCGCCGCCGC TERM 6165 4631913 - 4631903 - G 70 -6.8 -4.07568 | TTCTTTGTCTGAAAA CCAG TCG CTGG CGAAGCGGGACTGCT TERM 6166 4632028 - 4632013 - G 85 -6.8 -4.89393 | overlap 4632014 TAAATCCGACAAAAA CGGTCG CAAT CGACCA GATTAGCACCATCAG STY4772 4633437 - 4632274 - | putative metallo-dependent hydrolase TERM 6167 4633796 - 4633817 + r 79 -8.7 -4.20025 | opp_overlap 4633796 ATTAGCCAATAAAAA GGCCCTCAT TACT ATGAGAGCC TTTATCTTGACGATT TERM 6168 4633817 - 4633796 - R 100 -10.9 -5.11063 | opp_overlap 4633796 ATTAGCCAATAAAAA GGCCCTCAT TACT ATGAGAGCC TTTATCTTGACGATT ppa 4634377 - 4633847 - | inorganic pyrophosphatase TERM 6169 4634574 - 4634539 - R 83 -13.3 -3.23274 | opp_overlap 4634540, overlap 4634534 GGCCTGATAAGGCAA CGCCGCCATCGGACA TCTTAT TGCCCAATGGCGGCT TCATGCGTTATTCCG TERM 6170 4634540 - 4634573 + r 81 -12.4 -3.25169 | opp_overlap 4634539 4634534 GCCTGATAAGGCAAC GCCGCCATCGGACA TCTTAT TGCCCAATGGCGGC TTCATGCGTTATTCC fbp 4635602 - 4634604 - | fructose-1,6-bisphosphatase TERM 6171 4634674 - 4634632 - G 71 -11.3 -2.91593 | overlap 4634631 4634673 TATTCGCGGATAAAG CGTTCCACATCGTCAACCA TATGG CGGTTGCCGACGAAGAACG AGCGGCGCTGGTGCA TERM 6172 4635502 - 4635512 + g 73 -5.4 -4.63218 | TCGCGGTGGATGATC TTGG CGC CCAA TTTTATTGCCGACAG TERM 6173 4636222 - 4636235 + G 81 -8.1 -4.27512 | overlap 4636219 AGGTTTCCGCACGCC TGGGC GAGA GCCCA TTCTTTGTTATCGAA mpl 4635777 - 4637150 + | murein peptide ligase TERM 6174 4637182 - 4637155 - T 88 -7.6 -5.00616 | gap 1, overlap 4637156 TTGTGGGGTAAAAAA TGCCCGGT-GGCG CTG CGCTTACCGGGCC TACAATACGTACATT TERM 6175 4637181 - 4637156 - T 82 -11.1 -3.60048 | gap 1, overlap 4637155 TGTGGGGTAAAAAAT GCCCGGT-GGCG CTG CGCTTACCGGGC CTACAATACGTACAT yjga 4637808 - 4637257 - | hypothetical protein pmbA 4637904 - 4639256 + | peptidase PmbA TERM 6176 4639532 - 4639517 - g 73 -6 -4.45544 | overlap 4639501 4639518 CGGCATTAACTAAAA TGCGCG CGGC CGCGCT GGATGCTCAAAAAGC cybC 4639354 - 4639740 + | soluble cytochrome b562 TERM 6177 4639742 - 4639791 + F 74 -10.9 -2.79183 | gap 1 AGAAGTATCGTTAAT TTTTGTGGGATGGCGGCTTCGC TTTATCC GC-AGGTCGCCATCCGGCAAAA TGTAATACCCATCAC STY4779 4640018 - 4640356 + | hypothetical protein STY4780 4640367 - 4640729 + | hypothetical protein TERM 6178 4640800 - 4640768 - g 81 -8.4 -4.3467 | gap 1 ACGGTGAGAGTAAAA GGCAAGGGCG-ACGC CAAA GCACGCGCCTTTGCC GATGCGCTGAACCAT STY4781 4640729 - 4641031 + | hypothetical protein TERM 6179 4641018 - 4641031 + F 72 -3.1 -5.06414 | gap 1 ACAGGGTGGATTTCG TC-GCG AAA CGCTGA TTTTTATTAAAAAGG TERM 6180 4641697 - 4641711 + G 75 -6.4 -4.5394 | opp_overlap 4641697, overlap 4641675 4641698 ATGTCACCAAAGTGA TGATGG TTG CCATCG TTTTGCTGTTTGTGT STY4782 4641054 - 4641830 + | hypothetical protein TERM 6181 4642019 - 4642042 + G 100 -9.4 -5.27335 | overlap 4642015 ACCGGCGTCTACGGC GCGGTCGCCG CTTT CGGCGCCAGC TTTTTATTTGCCCGC STY4783 4641842 - 4642486 + | hypothetical protein TERM 6182 4643084 - 4643072 - g 93 -9.1 -4.72497 | CATGCAGCAAGAAAA CGGCA ACC TGCCG CTGATGGTACATATT STY4784 4642545 - 4643678 + | dihydroorotase STY4785 4643662 - 4644780 + | hypothetical protein STY4786 4644777 - 4645517 + | hypothetical protein TERM 6183 4645810 - 4645771 - gf 100 -15 -3.25088 | gap 1, opp_overlap 4645795, overlap 4645763 4645772 CTGCAAACGCAGCAA TCTCCCACGCTGGCGCGCG GTC CGCGCACCAGC-CAGGAGC GGATCCACTATTTGC TERM 6184 4645809 - 4645772 - gf 100 -18.5 -2.54732 | gap 1, opp_overlap 4645795, overlap 4645771 4645763 TGCAAACGCAGCAAT CTCCCACGCTGGCGCGCG GTC CGCGCACCAGC-CAGGAG CGGATCCACTATTTG TERM 6185 4645795 - 4645832 + GF 84 -6.1 -5.0538 | opp_overlap 4645772 4645771 4645763 CTGGCGCGCGGTCCG CGCACCAGCCAGGAGCG GATC CACTATTTGCTGGCGCG TTTTTTAACCTCCGC STY4787 4645474 - 4647447 + | BglB family transcriptional antiterminator TERM 6186 4647685 - 4647667 - g 74 -7.4 -4.1899 | opp_overlap 4647660 GCATGCCAGTGAAAA CCGTCACT CTT AGCGACAG TGAAGATGCACTGAT relB 4647525 - 4647767 + | bifunctional antitoxin/transcriptional repressor RelB relE 4647757 - 4648041 + | hypothetical protein nrdG 4648509 - 4648045 - | anaerobic ribonucleotide reductase-activating protein nrdD 4650768 - 4648630 - | anaerobic ribonucleoside triphosphate reductase TERM 6187 4648760 - 4648727 - G 76 -10.1 -3.90744 | opp_overlap 4648739 4648740, overlap 4648703 4648750 GGGCTGCCTAAATAA CCGCACACGCGACGG GTAA CCGAGACGCGCGCGG CGTCGTGGTTGCCGC STY4792 4650973 - 4651143 + | hypothetical protein treC 4652829 - 4651177 - | trehalose-6-phosphate hydrolase TERM 6188 4652698 - 4652671 - G 87 -8.5 -4.60797 | gap 2 TGGCGAGATATAAAA CGGCGT-GA-GCC AGAT GGCGTCCACGCCG AGTCGCTGTAGATAG treB 4654297 - 4652879 - | trehalose(maltose)-specific PTS system components IIBC TERM 6189 4652973 - 4652950 - G 70 -9.6 -3.32268 | overlap 4652938 4652953 GAATCACCGGGATAA CGATCGCGAT AACC ATCGCCATCG CAAACACCTGCCAGT TERM 6190 4653739 - 4653753 + g 95 -5.6 -5.40072 | opp_overlap 4653732 4653712 4653739, overlap 4653741 GCACGATACCAAGAA TCGGCG TGC CGCCCA TTTTTTTCACCGCCG TERM 6191 4653815 - 4653800 - G 80 -4.7 -5.03994 | CGGCAGATAGAAAAA GATCG CTTCGC CGATC AACCATAAAAAATCA TERM 6192 4654264 - 4654279 + g 75 -6.8 -4.39375 | opp_overlap 4654264, overlap 4654262 CAACCAGGTCAATCA GCCGGT CGAT ATCGGC TTGTTTTACTTTGCT TERM 6193 4654476 - 4654455 - R 73 -9.5 -3.45118 | gap 1, opp_overlap 4654464, overlap 4654458 CGAGGGTAGAAGGAA TGACGATCCG GCG CGGATCG-CA GCGGCCATTGATCTG TERM 6194 4654474 - 4654458 - R 79 -12.3 -2.87274 | opp_overlap 4654464, overlap 4654455 GGGTAGAAGGAATGA CGATCCG GCG CGGATCG CAGCGGCCATTGATC treR 4655382 - 4654435 - | trehalose repressor TERM 6195 4655434 - 4655421 - H 76 -5.3 -4.84359 | TGATGGTGATAAAAA GAGTA ACTT TACTC AAGCGAAGGGCAATG TERM 6196 4655619 - 4655648 + H 77 -12.1 -2.87564 | overlap 4655621 GAGAATTTTCCTTTT CCGGTAAGCCTGC CTCT GCTGTCTTACCGG TGTGTAAGACAGTGA TERM 6197 4657577 - 4657616 + G 89 -13.4 -3.59262 | opp_overlap 4657576 4657580, overlap 4657580 TATTGAAGGATTAAG CGACGACGCGCTGGCGGC GCTG GCCGCCCGTACGACGTTG TTTGCGCGTCTGACG TERM 6198 4657580 - 4657613 + G 85 -11.5 -3.93256 | opp_overlap 4657576 4657580, overlap 4657577 TGAAGGATTAAGCGA CGACGCGCTGGCGGC GCTG GCCGCCCGTACGACG TTGTTTGCGCGTCTG TERM 6199 4657914 - 4657930 + G 80 -4.3 -5.10029 | overlap 4657912 GGTAACGTGTTTAGC GTGCTGG TAG CGAGCGC TTTTTTGCCGTTCCT mgtA 4655766 - 4658474 + | magnesium-transporting ATPase MgtA STY4797 4659036 - 4658590 - | hypothetical protein yjgF 4659497 - 4659111 - | hypothetical protein pyrI 4660035 - 4659574 - | aspartate carbamoyltransferase regulatory subunit pyrB 4660983 - 4660048 - | aspartate carbamoyltransferase catalytic subunit TERM 6200 4660107 - 4660142 + g 73 -6 -4.38712 | overlap 4660092 GGCGAGCGAAAATAC CGTTGCCCGCCTGTTG GAAG TACCAGGCGTGTGGCG TTTTATCCACATCCG TERM 6201 4661031 - 4661014 - R 100 -12.7 -5.75342 | opp_overlap 4661004 4661014 CCTGGGCAAAAAAAA GCCCCTC AATT GAGGGGC TTGGTATTGGTTTTC TERM 6202 4661014 - 4661031 + r 85 -12.7 -3.4594 | opp_overlap 4661014, overlap 4661004 CCTGGGCAAAAAAAA GCCCCTC AATT GAGGGGC TTGGTATTGGTTTTC pyrL 4661120 - 4661019 - | pyrBI operon leader peptide STY4801 4661699 - 4661211 - | putative transcriptional regulator TERM 6203 4661828 - 4661882 + r 79 -12.2 -2.76263 | gap 1, opp_overlap 4661865, overlap 4661826 AAAAGGTGACGGCGT GCCTGATGGCGCTGTG-CTTATCAG TCCTGT CGGATAAGACGCGTCGCCATCTGGC TCGTTACATCATCGC STY4802 4663289 - 4661886 - | hypothetical protein TERM 6204 4663175 - 4663189 + g 70 -7.1 -4.07678 | CCTCTTTTCCCAGCG TGGCG TTCAT CGCCA TTTGGTATTTTCCCG TERM 6205 4663305 - 4663344 + r 81 -12.3 -3.14211 | gap 1, opp_overlap 4663310 GATGTTCTCTCCTGA TATCAC-GGATATGCGCC GCGAG GGCGCATATCCTGTGGGA TTAGTCGCCGAGCGT TERM 6206 4663338 - 4663310 - R 81 -13.2 -2.62184 | opp_overlap 4663305 TCTCTCCTGATATCA CGGATATGCGCC GCGAG GGCGCATATCCT GTGGGATTAGTCGCC STY4803 4664349 - 4663345 - | ornithine carbamoyltransferase TERM 6207 4664445 - 4664433 - R 77 -10.5 -3.30124 | CTGTAGGCCGGATAA GGCGG AAG CCGCC ATCCGGTAAAAAGCC STY4804 4665393 - 4664461 - | carbamate kinase TERM 6208 4665186 - 4665199 + g 74 -6.7 -4.36914 | GGTAGGGCGTAACGT TAGCG TAGG CGCTA TTTTGTAGCGCCAGC STY4805 4666624 - 4665404 - | arginine deiminase TERM 6209 4667284 - 4667270 - H 82 -5.8 -5.24799 | GTATAAAGAGAAAAA TAAAAC GCT GTTTTA ACTAAGGAGATGCGA TERM 6210 4667648 - 4667630 - g 70 -5.2 -4.46212 | opp_overlap 4667630 4667643 GCGTCGACGAGAAAA CCGTCGTC CTG AACGAAGG TGACTTTGTGGTGTT STY4806 4667299 - 4667751 + | hypothetical protein STY4807 4668829 - 4667825 - | ornithine carbamoyltransferase subunit I STY4808 4668995 - 4669411 + | hypothetical protein TERM 6211 4669430 - 4669451 + F 100 -10.9 -5.43866 | opp_overlap 4669424, overlap 4669425 TGCATAGTATGACGG TACGGCAGC GTCT GCTGTCGTA TTTTTTTACAGGTTA TERM 6212 4669773 - 4669797 + G 71 -10.7 -3.30771 | opp_overlap 4669774, overlap 4669760 4669774 AGCGCCATGCCGCAA ACTGATGACCC CTG GGGTCGTCAGC TTATCGACCGTATGG TERM 6213 4669796 - 4669774 - g 81 -12 -3.55444 | opp_overlap 4669773 4669760 4669774 GCGCCATGCCGCAAA CTGATGACCC CTG GGGTCGTCAG CTTATCGACCGTATG TERM 6214 4669774 - 4669796 + G 81 -14.2 -2.58249 | opp_overlap 4669774, overlap 4669773 4669760 GCGCCATGCCGCAAA CTGATGACCC CTG GGGTCGTCAG CTTATCGACCGTATG miaE 4669470 - 4670234 + | tRNA hydroxylase STY4810 4670399 - 4670244 - | hypothetical protein TERM 6215 4670386 - 4670369 - G 86 -12.7 -3.72576 | TCTGTCCTGAGTAAA GCCTGCC CTGC GGCAGGC AAAAAGAACTCACTC STY4811 4670967 - 4670479 - | hypothetical protein TERM 6216 4670995 - 4671020 + r 82 -11.3 -3.49618 | gap 1, opp_overlap 4670990 4670987 TGAATAATAAGTGAT TCCCGGATAACA GGA TGTT-TCCGGGA TTACTTATATCAGCA STY4812 4671589 - 4671074 - | putative acetyltransferase TERM 6217 4671353 - 4671341 - G 74 -10.5 -3.46602 | TTCGCTACAGGATAA CGGCG CCA CGCCG CCGCCGCCCACCACA TERM 6218 4671709 - 4671726 + H 84 -4.9 -5.3321 | opp_overlap 4671709 4671710 4671712, overlap 4671710 AGTATCGTAGTCAAA TCAGTAA CAAT TTACTGG TTTTTATTATTAATT STY4813 4671772 - 4672959 + | putative innner membrane protein TERM 6219 4672987 - 4672968 - T 100 -15 -4.66609 | opp_overlap 4672966 TATCTGATGTAAAAA GGCCGACG TTTA CGTCGGCC CATAATTCATGTTGT valS 4675956 - 4673101 - | valyl-tRNA synthetase TERM 6220 4674461 - 4674481 + g 77 -7.5 -4.36914 | opp_overlap 4674463, overlap 4674463 ACGCTGGTGGGATGG AACTGACGC AGG GCGTCGGTG TTTTCTGGCCAGCCG TERM 6221 4674463 - 4674479 + g 76 -10.1 -3.79419 | opp_overlap 4674463, overlap 4674461 GCTGGTGGGATGGAA CTGACGC AGG GCGTCGG TGTTTTCTGGCCAGC TERM 6222 4674966 - 4674946 - G 74 -9.7 -3.73775 | CTTACGGGCAGCAAA GCGTTCCAG CTT CTGGAACTC AGCCGGAATCTCGCT TERM 6223 4675725 - 4675741 + g 71 -4.3 -4.62783 | overlap 4675728 CGGCGTGGTCGGTGC CGACCTG CCA CAGGGTG TTTTTACCCTGCATA holC 4676438 - 4675956 - | DNA polymerase III subunit chi TERM 6224 4676494 - 4676507 + r 73 -9.5 -3.30124 | opp_overlap 4676463 4676484 4676483 AAAACGCCTGATGGT GGCGC TAAT GCGCC TTATCAGGCCTACGG STY4816 4678047 - 4676536 - | leucyl aminopeptidase STY4817 4678442 - 4679542 + | putative inner membrane protein TERM 6225 4679718 - 4679665 - g 95 -8.2 -5.06451 | gap 3, opp_overlap 4679683 GATCAGCTGAAAAAA GCGGGGCAGGGTA-AC-TACGACGCGC TGG GCGCGG-GTATGTACACCCTGCTCAGC GTACCTAAGGATATC STY4818 4679542 - 4680624 + | putative inner membrane protein STY4819 4681828 - 4680830 - | regulatory protein TERM 6226 4681284 - 4681294 + g 71 -8.2 -3.87075 | AGATAGAGAATTTTC CGCC GCT GGCG TTTATCCAGCATGGT TERM 6227 4681715 - 4681735 + g 80 -4.6 -5.00616 | overlap 4681716 GATCTGCGCAATACG CTCGCCGG TTTCC CTGGCGAC TTTTTTCGGCGAGCG TERM 6228 4681755 - 4681770 + g 70 -3.2 -4.82901 | overlap 4681742 TTCGGCGAGCGGATG TAACGG CTCA CCGTCA TTTTTGTCACGCCAG TERM 6229 4682081 - 4682093 + H 70 -10.5 -2.57489 | opp_overlap 4682081, overlap 4682077 4682092 CGCCAGTACCATTAA CGCCG GAT CGGCG TGGGTTACGTTAATA TERM 6230 4682093 - 4682081 - H 74 -10.5 -3.23216 | opp_overlap 4682081 4682077 4682092 CGCCAGTACCATTAA CGCCG GAT CGGCG TGGGTTACGTTAATA TERM 6231 4683337 - 4683366 + H 100 -8.6 -5.22006 | gap 1, overlap 4683340 ATTCATAGAGTTCGA GCT-CGCCGCC CGCCTCTTT GGCGGCGTAGC TTTTTATTATCGTCA TERM 6232 4684011 - 4684000 - g 90 -5.8 -5.24129 | opp_overlap 4683999 4683993 4684000, overlap 4683980 CCCTCTGACAAAAAA GAGG ATCG CCTC GCTTTTGGTGTTTGG STY4821 4683853 - 4685118 + | integrase TERM 6233 4685175 - 4685154 - T 95 -11.7 -4.30978 | opp_overlap 4685146 4685154 TTTAATGGATTAAAA TAGGCACAA TTAC TTGTGCCTA TTAATTCAATCTTTC TERM 6234 4685154 - 4685175 + T 82 -11.7 -3.41671 | opp_overlap 4685154, overlap 4685146 TTTAATGGATTAAAA TAGGCACAA TTAC TTGTGCCTA TTAATTCAATCTTTC STY4822 4686257 - 4685181 - | protein kinase STY4823 4687327 - 4686254 - | protein kinase STY4824 4688465 - 4687302 - | hypothetical protein TERM 6235 4687489 - 4687500 + gr 89 -3 -5.4505 | opp_overlap 4687489, overlap 4687486 TGTGGTGTTTCAGAA TCTA ATTC TAGA TTTTTTGTTGAAGGA TERM 6236 4687606 - 4687626 + gr 74 -4.7 -4.72986 | opp_overlap 4687609, overlap 4687609 ATATTTTGAGAGAAG TAATTCTGC GCT GCAGGATAA TTTTTCATCCACATG TERM 6237 4688670 - 4688694 + r 78 -5 -5.00616 | gap 1, opp_overlap 4688671, overlap 4688659 4688671 GGATTTGCATGCAAA ACCATGCA-CC TTAT GGATGCATGGC TTTTTTCAGGAAAAA TERM 6238 4688693 - 4688671 - R 83 -9.9 -4.18494 | opp_overlap 4688659 4688670 4688671 GATTTGCATGCAAAA CCATGCACC TTATG GATGCATGG CTTTTTTCAGGAAAA STY4825 4689307 - 4688741 - | phage polarity suppression protein STY4826 4689562 - 4689323 - | bacteriophage gene regulatory protein STY4827 4690426 - 4689566 - | putative phage capsid protein TERM 6239 4690892 - 4690925 + G 70 -3.1 -4.75472 | gap 1, overlap 4690901 CTGCCCCTGCCGCGC CGCTGATG-CCGGTTT CTG ATACCGTTCATGAGCG TTTTATTCGTCTGCC STY4828 4690849 - 4691172 + | phage DNA binding protein TERM 6240 4691237 - 4691251 + F 100 -7.8 -5.77988 | CTAACGGCGACACCT GACGCG CCA TGCGTC TTTTTTTGTGTCTAT cI 4691273 - 4691656 + | phage immunity repressor protein STY4830 4691653 - 4691880 + | hypothetical protein STY4831 4691877 - 4692197 + | P4 phage protein TERM 6241 4692690 - 4692666 - g 87 -8.6 -4.60797 | gap 2, opp_overlap 4692663 4692666 CGGCCACACACAAAA CCGGCGGCGTGA CGT TC-CG-CGCCGG TGATATGGTTGTCCC TERM 6242 4692841 - 4692824 - g 100 -8.4 -5.16572 | opp_overlap 4692824 ATCGAAGGGAAAAAA CAGGCG GGAAAA CGCCTG TGGGTTGCGGAGGGC TERM 6243 4693032 - 4693022 - g 71 -8.2 -3.8377 | opp_overlap 4693027, overlap 4693023 AACGGCCAGAGTAAA GCCG CTG CGGC CGCAGACGCCTGCGA TERM 6244 4693249 - 4693274 + G 72 -11.9 -2.63301 | opp_overlap 4693240 ACATTACGGCGAAGC GCTGGCCGT GGATGCGA ACGGCCAGC TCCTGTCCCGATATG STY4832 4692212 - 4694545 + | bacteriophage P4 DNA primase TERM 6245 4694555 - 4694572 + F 100 -12.7 -5.38054 | opp_overlap 4694551 ACATAACCAACTCCA GACCGGC AACA GCCGGTC TTTTTCTTTCTGGAC TERM 6246 4694770 - 4694759 - f 73 -4.4 -4.78107 | overlap 4694766 4694767 CAGGACGAGCAAAAA TCAC AAAT GTGA AGAGTCGATTGTTCA STY4833 4694767 - 4694907 + | hypothetical protein TERM 6247 4694934 - 4694898 - f 81 -13 -2.74523 | opp_overlap 4694901, overlap 4694895 TGATGTTCAATATTA CCCCGGTTAGGATCCG TATAT CGGAACCTAACCGATG GGGAAAATAACAATT TERM 6248 4695013 - 4695032 + G 70 -5 -4.39724 | overlap 4695016 TGGGGGCACAAAAGG GGGCACAT GAAC ATGTGTTC TTCTTTATTTCCTTT STY4834 4694997 - 4695146 + | hypothetical protein TERM 6249 4696894 - 4696934 + F 83 -10.6 -3.81256 | opp_overlap 4696897, overlap 4696889 4696895 4696897 TAAAATGGCGTGAGT ATATTAGCATCCGCACAG ATAAA TTGTGCGAATGCTAATAG TTGATTTTTGGAGAT TERM 6250 4696895 - 4696933 + F 84 -14.1 -2.88031 | opp_overlap 4696897, overlap 4696894 4696889 4696897 AAAATGGCGTGAGTA TATTAGCATCCGCACAG ATAAA TTGTGCGAATGCTAATA GTTGATTTTTGGAGA TERM 6251 4696897 - 4696931 + F 80 -12.3 -2.9838 | opp_overlap 4696897, overlap 4696895 4696894 4696889 AATGGCGTGAGTATA TTAGCATCCGCACAG ATAAA TTGTGCGAATGCTAA TAGTTGATTTTTGGA TERM 6252 4696931 - 4696897 - f 84 -13.8 -2.78715 | opp_overlap 4696897 4696895 4696894 4696889 AATGGCGTGAGTATA TTAGCATCCGCACA GATAAAT TGTGCGAATGCTAA TAGTTGATTTTTGGA TERM 6253 4697462 - 4697507 + F 73 -7.9 -4.18908 | gap 1, opp_overlap 4697455 4697475, overlap 4697455 4697467 4697475 4697498 AAAACTAATTTAATT TAAACTT-TATAAATGCCCTCA ATA TGAGGGCATTTGGATAATTTTA TTATTTTAAAAATAT TERM 6254 4697467 - 4697502 + F 91 -7.8 -5.093 | gap 1, opp_overlap 4697475, overlap 4697462 4697475 4697498 TAATTTAATTTAAAC TT-TATAAATGCCCTCA ATA TGAGGGCATTTGGATAA TTTTATTATTTTAAA TERM 6255 4697475 - 4697493 + F 95 -13.2 -3.77014 | opp_overlap 4697475, overlap 4697467 4697462 TTTAAACTTTATAAA TGCCCTCA ATA TGAGGGCA TTTGGATAATTTTAT TERM 6256 4697493 - 4697475 - f 95 -13.2 -3.95219 | opp_overlap 4697475 4697467 4697462 TTTAAACTTTATAAA TGCCCTCA ATA TGAGGGCA TTTGGATAATTTTAT TERM 6257 4697538 - 4697520 - f 82 -7.6 -4.63527 | opp_overlap 4697509 4697498 4697519 4697520 4697522 TTATTATTTTAAAAA TATCTATT TTG AATAGATA GGTTTTATGCTTCCA sefB 4697576 - 4698328 + | fimbrial chaperone protein sefC 4698333 - 4700849 + | outer membrane fimbrial usher protein TERM 6258 4701087 - 4701075 - f 85 -5.5 -5.27769 | opp_overlap 4701075 AGAAAAAATTAAAAA TACCC CAG GGGCA TATATTATTAGAGGT TERM 6259 4701317 - 4701296 - f 77 -7.2 -4.3953 | opp_overlap 4701292, overlap 4701297 TTGAATTATAATAAA GGGTGCGC AAATTG GCGCACCT ATAACTCTTAATTAT TERM 6260 4701316 - 4701297 - f 74 -10.7 -3.22995 | opp_overlap 4701292, overlap 4701296 TGAATTATAATAAAG GGTGCGC AAATTG GCGCACC TATAACTCTTAATTA STY4842 4702716 - 4702925 + | regulatory protein TERM 6261 4703053 - 4703076 + G 77 -8 -4.08767 | opp_overlap 4703053, overlap 4703036 4703055 4703057 GCTGCAGGGCTATAA CTGCGGGCAG ATTG CTGCCCTCTG TTTTCGCAGCGTCAA TERM 6262 4703055 - 4703074 + G 70 -9.2 -3.6422 | opp_overlap 4703053, overlap 4703036 4703053 4703057 TGCAGGGCTATAACT GCGGGCAG ATTG CTGCCCTC TGTTTTCGCAGCGTC TERM 6263 4703057 - 4703072 + G 73 -10.4 -3.39908 | opp_overlap 4703053, overlap 4703036 4703055 4703053 CAGGGCTATAACTGC GGGCAG ATTG CTGCCC TCTGTTTTCGCAGCG STY4843 4702910 - 4703260 + | GerE family regulatory protein TERM 6264 4703316 - 4703343 + F 72 -4.8 -4.61868 | overlap 4703315 TTATTACGCCTGTCT GGCCGTCGTCAT ATTA ATGGCAATGGTC TTTTGTGTGTCAGTG TERM 6265 4703603 - 4703619 + F 77 -10.9 -3.19463 | opp_overlap 4703615, overlap 4703577 TGATTGCGCAGGAGT GGGAGTT CAT AACTCCC TTGGTGGCTGATGCC TERM 6266 4704532 - 4704485 - g 72 -2.5 -4.96501 | gap 1, opp_overlap 4704531, overlap 4704486 4704488 CGGCAGAAAAAGAAA TTACCGGGATACACGGC-GGCC TCTCC GGCCTGACATGGAACCCGGACA GCAGAACGCTGTTTG STY4846 4704346 - 4705191 + | putative outer membrane protein TERM 6267 4706365 - 4706391 + T 100 -18.1 -3.66178 | ACCGCCTGATGTTAG CCGCTCCCGAT GTTTA ATCGGGAGCGG TTTCGCATTAAGGGA STY4849 4710148 - 4706399 - | helicase related protein TERM 6268 4707892 - 4707908 + g 80 -9.4 -4.07568 | opp_overlap 4707889 4707891 CTTCATCAGAATTAT CGGGGA TATAC TCCCCG TTTTGCGGACGGCGC TERM 6269 4708904 - 4708921 + g 75 -4.1 -4.85599 | GACGGCAATAGCCTC CTGCG TTTTATCC CGCAG TTTTTCTGCCGTAAC STY4850 4712723 - 4710186 - | DEAD-box helicase-related protein TERM 6270 4710895 - 4710909 + g 70 -10 -3.43919 | opp_overlap 4710894, overlap 4710894 4710900 GGCCCGCCCAGTAAC GCCCTT CGG AAGGGC TGTTTACCCTTTCCG TERM 6271 4712254 - 4712243 - G 78 -2.2 -5.27335 | GTGGGTAAAGAAAAA GTGC TCTC ACAC CTATCAACGGTTTTT TERM 6272 4712480 - 4712494 + g 77 -4.2 -4.87892 | overlap 4712482 GCGAGTCCACCACCT CCTTGC TTA GCAACG TTTGTTTTGTTGCAA STY4851 4716035 - 4712736 - | hypothetical protein TERM 6273 4713236 - 4713223 - G 74 -2.3 -5.1101 | overlap 4713224 TTATGAGTCAAAAAA GCACG AAAA CGTGT GGCGGAACGTTTAAC TERM 6274 4713286 - 4713270 - G 72 -2.2 -4.91712 | overlap 4713271 TGTAATGGATAAAAA CTCCCA GAAAA CGGGAA ACTCACTTTCAATAC TERM 6275 4714233 - 4714264 + g 74 -7.3 -4.17416 | opp_overlap 4714233 4714232 TATTTGTAATGAAAT TGATGCAGGAGGA ATGCCC TCCGCCTTCATCA TTATTTCTGTACTAT TERM 6276 4714835 - 4714817 - G 76 -9.6 -3.84406 | TTGGCAGCACAATAA GTACATGG CTG CCACGTAC GCTGCAAGAGGCTTG TERM 6277 4716073 - 4716083 + H 86 -4 -5.4593 | opp_overlap 4716073, overlap 4716067 AGTGAATGGCTGAAA GTTA TTA TAAC TTTTTGTTATTTTGA TERM 6278 4716230 - 4716247 + H 71 -7.1 -4.08394 | opp_overlap 4716229 4716232 AATCTGTAAGGAGAT GATTTGT AGCT ACAAATC TTTTCAACCCCATAT TERM 6279 4716277 - 4716313 + H 84 -8.6 -4.67353 | overlap 4716280 TCATCCCATTGAACC TCCGGCCGGAACCGTC TTTAC GATGGTTCCGGCCTTC TTTTTACCTGCCTGC TERM 6280 4716280 - 4716310 + H 100 -19.1 -4.44608 | overlap 4716277 TCCCATTGAACCTCC GGCCGGAACCGTC TTTAC GATGGTTCCGGCC TTCTTTTTACCTGCC STY4852 4716299 - 4716538 + | hypothetical protein STY4853 4716616 - 4717491 + | hypothetical protein TERM 6281 4717767 - 4717784 + G 73 -5.6 -4.53705 | opp_overlap 4717766 4717769 4717778 ATTCGTCGTATGAAG CATGAG AATTAC CTCATG TTTTATATAAGGATT STY4854 4717653 - 4717928 + | hypothetical protein TERM 6282 4717926 - 4717968 + T 90 -15.3 -2.74514 | opp_overlap 4717930 4717935 4717939, overlap 4717930 4717935 4717939 TTTATAACAGCTTTA TAAATTAAACAAATCTGCC ATAGA GACAGATTTGTTTAATTTA TAATTAGAGGTTTGC TERM 6283 4717930 - 4717964 + T 95 -11.7 -4.05714 | opp_overlap 4717930 4717935 4717939, overlap 4717926 4717935 4717939 TAACAGCTTTATAAA TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA TTTATAATTAGAGGT TERM 6284 4717964 - 4717930 - T 100 -13.9 -3.89501 | opp_overlap 4717930 4717926 4717935 4717939, overlap 4717935 4717939 TAACAGCTTTATAAA TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA TTTATAATTAGAGGT TERM 6285 4717935 - 4717959 + T 71 -7.2 -4.17789 | opp_overlap 4717930 4717935 4717939, overlap 4717930 4717926 4717939 GCTTTATAAATTAAA CAAATCTGCC ATAGA GACAGATTTG TTTAATTTATAATTA TERM 6286 4717959 - 4717935 - T 79 -9.4 -4.13995 | opp_overlap 4717935 4717930 4717926 4717939, overlap 4717930 4717939 GCTTTATAAATTAAA CAAATCTGCC ATAGA GACAGATTTG TTTAATTTATAATTA STY4855 4718688 - 4717972 - | hypothetical protein TERM 6287 4718723 - 4718744 + r 73 -4.5 -4.87273 | gap 1, opp_overlap 4718723 4718724, overlap 4718724 4718725 AATTATTTACATTAA TG-GCAGGTT AAT AACCTGCATA TTTTTCTACCGTATT TERM 6288 4718724 - 4718742 + r 73 -7.4 -4.05067 | opp_overlap 4718723 4718724, overlap 4718723 4718725 ATTATTTACATTAAT GGCAGGTT AAT AACCTGCA TATTTTTCTACCGTA TERM 6289 4718725 - 4718741 + r 75 -10.9 -3.02317 | opp_overlap 4718723 4718724, overlap 4718724 4718723 TTATTTACATTAATG GCAGGTT AAT AACCTGC ATATTTTTCTACCGT TERM 6290 4719092 - 4719061 - R 82 -11 -3.6106 | gap 1, opp_overlap 4719062 4719063, overlap 4719062 TTGAATACTTTTAAA TGGAGGTATACCTCT TGT AG-GGTATACCTCCT GCTTCACGTTATCGC TERM 6291 4719062 - 4719091 + r 87 -14.5 -2.76453 | gap 1, opp_overlap 4719061 4719062, overlap 4719063 TGAATACTTTTAAAT GGAGGTATACCTCT TGT AG-GGTATACCTCC TGCTTCACGTTATCG TERM 6292 4719091 - 4719062 - R 87 -14.5 -2.76315 | gap 1, opp_overlap 4719062 4719063, overlap 4719061 TGAATACTTTTAAAT GGAGGTATACCTCT TGT AG-GGTATACCTCC TGCTTCACGTTATCG STY4856 4720729 - 4719101 - | hypothetical protein TERM 6293 4720185 - 4720167 - G 71 -10.2 -3.28791 | opp_overlap 4720184, overlap 4720151 4720154 AGGCCGTGCGGACAA CGCTGCCA GCC TGGCTGCG CCATGCCCTGGCGTT STY4857 4720994 - 4720737 - | hypothetical protein STY4858 4721482 - 4722090 + | hypothetical protein TERM 6294 4722402 - 4722421 + F 82 -2.8 -5.47159 | overlap 4722405 TGAATTAGAGTAATG TGGCGCTA TTCA TAGCGTAA TTTTTTCTGTTGCGG STY4859 4722451 - 4723362 + | hypothetical protein TERM 6295 4723422 - 4723452 + F 100 -8.3 -5.55664 | TTATTTAAATTTGTT CAGACGTCGGAAT TTTTT GTTCTGCCGTCTG TTTTTTTAGTGATGA STY4860 4723573 - 4724034 + | hypothetical protein STY4861 4724716 - 4724051 - | hypothetical protein uxuR 4725066 - 4725839 + | DNA-binding transcriptional repressor UxuR TERM 6296 4725855 - 4725875 + T 86 -8.9 -4.4773 | opp_overlap 4725854 TTATACCTGGAATAG CGTGGGCAG ACC CAGTCCACG TTTTACTTCCTGTAG trpS2 4726853 - 4725840 - | tryptophanyl-tRNA synthetase II TERM 6297 4726501 - 4726512 + g 74 -2.2 -5.0538 | CGGGTAAAGCCTTTT TGGG CAAT CTCA TTTTTTACCGTAGGA TERM 6298 4726925 - 4726904 - H 90 -15.9 -2.64274 | opp_overlap 4726901 4726907, overlap 4726881 4726890 4726888 4726891 4726901 4726900 ACGTCCCGAAACGCA GTAGCCGCC TTTC GGCGGCTAC TTAAAAAGGGATAGT TERM 6299 4726907 - 4726922 + H 76 -11.8 -2.71011 | opp_overlap 4726881 4726890 4726888 4726891 4726904 4726901 4726900, overlap 4726901 TCCCGAAACGCAGTA GCCGCC TTTC GGCGGC TACTTAAAAAGGGAT STY4864 4727150 - 4727302 + | hypothetical protein TERM 6300 4727996 - 4727970 - g 71 -12.2 -2.53164 | opp_overlap 4727991 4727992, overlap 4727969 4727972 TCACGCATGAGCAAT CATGGCGACGCC GAA GGCAGCGCCACG GAGACCGTGGATTTG TERM 6301 4727991 - 4728007 + G 74 -7.9 -4.13995 | opp_overlap 4727972 4727970 4727969, overlap 4727992 GACGCCGAAGGCAGC GCCACGG AGA CCGTGGA TTTGGTTTATAGCCA TERM 6302 4727992 - 4728006 + G 72 -11.4 -3.07915 | opp_overlap 4727972 4727970 4727969, overlap 4727991 ACGCCGAAGGCAGCG CCACGG AGA CCGTGG ATTTGGTTTATAGCC STY4865 4727571 - 4728101 + | hypothetical protein TERM 6303 4728870 - 4728842 - g 81 -8.2 -4.37658 | opp_overlap 4728861, overlap 4728843 AACGTGGCGATAAAA CTGCGGC-GCAAGC GCT GCT-GCTGCCGCAA ATCGATAGCCTTATT STY4866 4728340 - 4729074 + | aspartate racemase STY4867 4729988 - 4729080 - | putative DNA-binding transcriptional regulator TERM 6304 4729335 - 4729317 - G 83 -6 -4.87807 | CGAAGAGACGAAAAA TGTACTGA AAC TCAGTTCA GCATGGCGAGTCAGG TERM 6305 4729998 - 4730051 + r 71 -10.3 -2.6039 | gap 1, overlap 4729994 ATCCATTTACCGTTA T-CCTGTCAGCCGTCCGAAGGGGCAT TCT ACGTCCATTCGGGCGGCTGACAACCA CTTATCCCGTCCTCT iadA 4731279 - 4730107 - | isoaspartyl dipeptidase STY4869 4731753 - 4731292 - | hypothetical protein STY4870 4732421 - 4731750 - | hypothetical protein STY4871 4733080 - 4732706 - | hypothetical protein TERM 6306 4733102 - 4733068 - G 70 -9.6 -3.41839 | opp_overlap 4733063 TAGACAGATTGATAA CACTAAAAACCATA GAATAAG TATAGTTTTTAGTG GCATCTTTACCTTGA STY4872 4734404 - 4733220 - | hypothetical protein TERM 6307 4733300 - 4733286 - G 77 -3.5 -5.0133 | gap 1, opp_overlap 4733297, overlap 4733288 4733289 CAGCGCGGCAAAAAA GAGCGC CGCG GCGC-C GCAAAGCGTGGCGTT TERM 6308 4733299 - 4733288 - G 74 -7.2 -4.13561 | opp_overlap 4733297, overlap 4733286 4733289 GCGCGGCAAAAAAGA GCGC CGCG GCGC CGCAAAGCGTGGCGT STY4873 4735895 - 4734624 - | hypothetical protein TERM 6309 4735949 - 4735978 + r 79 -10.8 -3.5891 | opp_overlap 4735940 4735947 4735944, overlap 4735948 AAATATCAGATGATC CTGTGCCGGATA AGCCTC TATCCGGCAGAG TGTTTACTTCTCAGC STY4874 4737223 - 4735982 - | putative sugar transport protein TERM 6310 4737724 - 4737740 + G 83 -12.3 -3.61889 | opp_overlap 4737726 AATCGACGACCTCAA CACCGCA TGA TGCGGTG TTTAAAACCTTTTTG STY4875 4737702 - 4738667 + | hypothetical protein TERM 6311 4738693 - 4738717 + T 75 -11.3 -3.04589 | overlap 4738687 GTCTGAATGTTGCAG GCCCGGTGCCC ACC GGGCAACGCGC TCTATAATTATCGTT TERM 6312 4740059 - 4740082 + T 73 -7.4 -4.05033 | gap 1, overlap 4740061 CGCTAAACGCATGTG CC-TCCCGGAT TGA AACCGGGATGG TTTATATCAACTGGC STY4878 4740458 - 4740315 - | hypothetical protein TERM 6313 4740343 - 4740355 + g 77 -4.8 -4.84761 | TTATTTATCCACGTT GCAC TAACC GTGC TTTTTATCCCGGTAT STY4879 4741365 - 4740664 - | hypothetical protein TERM 6314 4741400 - 4741428 + r 100 -12.5 -4.51799 | opp_overlap 4741403, overlap 4741403 ATATGAATTATAATT AAAGCTGGCAAGG GTT CTTTGCCAGCTTA TTTTATGCGTTTACT TERM 6315 4741403 - 4741425 + r 100 -14.2 -4.35693 | opp_overlap 4741403, overlap 4741400 TGAATTATAATTAAA GCTGGCAAGG GTT CTTTGCCAGC TTATTTTATGCGTTT TERM 6316 4741425 - 4741403 - R 95 -12 -4.04295 | opp_overlap 4741403 4741400 TGAATTATAATTAAA GCTGGCAAGG GTT CTTTGCCAGC TTATTTTATGCGTTT yjiW 4741834 - 4741439 - | endoribonuclease SymE TERM 6317 4741985 - 4741967 - R 100 -11.7 -5.29445 | GGGGAATAATAAAAA GCGCACC GGGAA GGTGCGC AGGAAAATAAGCGTC hsdS 4743387 - 4741999 - | specificity determinant for hsdM and hsdR TERM 6318 4744461 - 4744432 - R 79 -4.1 -5.26875 | gap 1, overlap 4744433 4744434 GCTTCAATCAAAAAA CCTGC-GGTCCCGG CAG CCGGGTCCTGCACC ACCTCACGCGGCTGC TERM 6319 4744459 - 4744434 - R 74 -11.1 -2.84518 | gap 1, overlap 4744433 4744432 TTCAATCAAAAAACC TGC-GGTCCCGG CAG CCGGGTCCTGCA CCACCTCACGCGGCT hsdR 4748637 - 4745128 - | type I restriction enzyme EcoKI subunit R TERM 6320 4746438 - 4746461 + g 100 -6 -5.4505 | overlap 4746429 CCATGTCGGCATGGG CGTTGGTG ACGCAGAA CACCAGCG TTTTTTGTTGCCCGA TERM 6321 4747325 - 4747348 + g 77 -3.9 -4.99043 | gap 1, overlap 4747338 CCGAGTTCGCTCATT CCGG-GGTTT TCAGC AAACCACTGG TTTTGTTTCTGCGGG TERM 6322 4747396 - 4747416 + g 77 -8.2 -4.20042 | CAGCAGCTCTTCCGG GCGATGCC ATTCC GGCAGCGC TTTTGACATATTGGT TERM 6323 4749086 - 4749072 - g 77 -8.6 -4.08216 | overlap 4749084 CTATCCCGGGGAAAA TGGTGT TTA ACACCA GCGGGAATGAGCTGG mrr 4748835 - 4749749 + | mrr restriction system protein TERM 6324 4749991 - 4749960 - f 82 -13.4 -3.11291 | overlap 4749963 GGTATAATCGTAAGA TAATTGTATATACA TTTT TGTATATACAATTA GGGAAAACACATGCC TERM 6325 4749988 - 4749963 - f 83 -10.7 -3.6947 | overlap 4749960 ATAATCGTAAGATAA TTGTATATACA TTTT TGTATATACAA TTAGGGAAAACACAT STY4886 4750002 - 4750289 + | hypothetical protein STY4887 4750276 - 4750578 + | hypothetical protein STY4888 4751609 - 4750653 - | putative GTP-binding protein YjiA STY4889 4751823 - 4751620 - | hypothetical protein TERM 6326 4751876 - 4751848 - R 76 -7.5 -4.3255 | gap 2, opp_overlap 4751855 CTGTTAATGAATAAA GCCGGAT--GGCG GCTTG CGCCTTATCCGGC CTACACTAGCCGGGA TERM 6327 4751910 - 4751885 - R 73 -11.1 -2.62263 | gap 1, opp_overlap 4751884 4751882 ATCCGGCCTACACTA GCCGGG-ATCGC TGT GCGCTACCCGGC ATCAGTTTTAGTGGT cstA 4754068 - 4751918 - | carbon starvation protein TERM 6328 4755432 - 4755399 - R 76 -8.2 -4.16251 | ACAGAACGCCGAAAA CGCCCGTCAG-GCCAG CCAT CTGGCGCTGA-GTGCG TCAGAGACAGCGCAA TERM 6329 4755533 - 4755515 - R 70 -5.2 -4.37886 | overlap 4755516 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATCGACGGTATTGC TERM 6330 4756210 - 4756256 + r 74 -8.6 -3.98224 | opp_overlap 4756210 4756213, overlap 4756206 4756219 GTTTATTGATAAAGA TGATGTGTAGGCCGGGTAAGGC GTA GCCGCACCCGGCATATATGACA TTCTCTTTTAACTCT mdoB 4758555 - 4756264 - | phosphoglycerol transferase I TERM 6331 4756684 - 4756668 - G 76 -5.2 -4.8048 | CCGCCACATTAAAAA TAAAGC TATCG GCTTTA TAACGAATATCGTTA TERM 6332 4757595 - 4757582 - G 72 -3.8 -4.77986 | overlap 4757572 GTAAACAGCGAAAAA CGCT GGCCTG AGCG GGAAAGCGCTTCAAA TERM 6333 4757786 - 4757800 + g 71 -4.2 -4.61231 | overlap 4757787 CCCTGCACGAAATAG TTCTGG TAG CCGGAG TTTTTCAGAATATCG yjjA 4759299 - 4758838 - | hypothetical protein TERM 6334 4759029 - 4759039 + g 76 -5.4 -4.7416 | CCAACCCTAACTTGT TCAG AAT CTGA TTTTTAACGTTTTCC dnaC 4760094 - 4759357 - | DNA replication protein DnaC dnaT 4760636 - 4760097 - | primosomal protein I TERM 6335 4760613 - 4760591 - G 80 -9.2 -4.10161 | GATGATCGTGTAAAA GGACGTCA ATACCGA TGACGTCC GACGTTAAAATTCTG STY4898 4761202 - 4760729 - | hypothetical protein STY4899 4762104 - 4761193 - | hypothetical protein TERM 6336 4762004 - 4762020 + g 75 -3.6 -4.85782 | GACATTCTATGCGCC GCCACT ATGAC AGAGGC TTTCTTTTTAACACG TERM 6337 4763271 - 4763254 - g 84 -3.3 -5.41143 | opp_overlap 4763256, overlap 4763256 TAGCGCCCAAAAAAA TAGCGCC ATGC GACGCTT ATCAATACACAGTAA TERM 6338 4763269 - 4763256 - g 71 -5.9 -4.34482 | opp_overlap 4763256, overlap 4763254 GCGCCCAAAAAAATA GCGCC ATGC GACGC TTATCAATACACAGT STY4900 4762682 - 4763407 + | putative regulatory protein STY4901 4763416 - 4764042 + | DNA-binding transcriptional activator BglJ STY4902 4764551 - 4764093 - | hypothetical protein STY4903 4765490 - 4764702 - | ferric iron reductase involved in ferric hydroximate transport TERM 6339 4764801 - 4764779 - G 75 -11.3 -3.40403 | opp_overlap 4764800 TTCTGCGTACCAGAA GACCGTCGC GCATT ACGACGGTC CGCCACAGCGGGTTA TERM 6340 4764868 - 4764850 - G 90 -4.5 -5.40072 | opp_overlap 4764850, overlap 4764852 4764853 4764854 TGCTTTTCAAAAAAA CAGCGCT GGCGT AGCGTTG CCAGCAGGGCTTCGC STY4904 4766675 - 4765611 - | hypothetical protein TERM 6341 4766604 - 4766586 - G 83 -10.2 -3.92694 | overlap 4766588 GAAAACGAGAGTAAA TAGCGCCG ACA CGGCGCTG AGAAACAAGAAAAGA TERM 6342 4766602 - 4766588 - G 85 -12.8 -3.53452 | overlap 4766586 AAACGAGAGTAAATA GCGCCG ACA CGGCGC TGAGAAACAAGAAAA STY4905 4766926 - 4767162 + | hypothetical protein TERM 6343 4767656 - 4767644 - T 70 -9.1 -3.30243 | opp_overlap 4767651 4767651, overlap 4767646 ACGTAGGTTGGATAA GACGC CTG GCGTC GCCATCCGGCACATG rsmC 4768731 - 4767703 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 6344 4768807 - 4768826 + H 76 -9.2 -3.71378 | GATTTGCTATATTTG CGCCCCTG ATTA CAGGAGCG TTTCGCTATGACATC holD 4768834 - 4769271 + | DNA polymerase III subunit psi rimI 4769216 - 4769662 + | ribosomal-protein-alanine N-acetyltransferase TERM 6345 4769923 - 4769937 + G 70 -2.7 -4.71828 | AAACGTTGCGCCGGG GCGGC TGAAT GACGC TTTTATTAGTGCGAT STY4909 4769681 - 4770361 + | nucleotidase TERM 6346 4770957 - 4770943 - g 70 -7.1 -4.18697 | opp_overlap 4770943, overlap 4770935 AAAATGAGCTGAAAA TCGGC TGTGC GCCGA TCACCTGGCCGATTG TERM 6347 4771769 - 4771779 + G 81 -8.2 -4.24002 | overlap 4771768 CGATCTGATTGTCGG CGCC GTG GGCG TTTTGCAGTTTGACG prfC 4770453 - 4772042 + | peptide chain release factor 3 TERM 6348 4772053 - 4772072 + F 100 -16.4 -3.33483 | opp_overlap 4772029, overlap 4772048 ACTGATCCCTTTCCG GGCGCGGC ATCC GCCGCGCC TTCGTACTTTCCCTG osmY 4772444 - 4773061 + | periplasmic protein TERM 6349 4773074 - 4773100 + F 86 -14.5 -2.62184 | gap 1, overlap 4773074 TAATTCGTCGTAATT CGTCCTCCCGAC GTTT GTCGGGAGG-CG TAATGTGCACCACAC STY4912 4773172 - 4773351 + | hypothetical protein TERM 6350 4773400 - 4773382 - f 90 -14.6 -3.1637 | opp_overlap 4773382 ATATATTGCTATCAA GCCAGTCC AGC GGACTGGC TTTTACGGTTTTAGC TERM 6351 4773382 - 4773400 + F 100 -14.6 -4.28049 | opp_overlap 4773382 ATATATTGCTATCAA GCCAGTCC AGC GGACTGGC TTTTACGGTTTTAGC TERM 6352 4774310 - 4774282 - g 74 -10.9 -3.54543 | ATTTATCCGCCGAAA CCGCTGCACAGCA TGG CGCTGGGCAGCCG TATCCCGGCGCTGCG STY4914 4773475 - 4774548 + | hypothetical protein TERM 6353 4774701 - 4774719 + G 74 -8 -3.9712 | overlap 4774695 4774688 CGCGTGCTGGCGCTG GCGGCGCG TTT CCCGTCGC TTTATGCTGCGCTGG STY4915 4774545 - 4775318 + | putative deoxyribonuclease YjjV STY4916 4776214 - 4775351 - | hypothetical protein TERM 6354 4776159 - 4776140 - GT 77 -9.2 -3.9461 | overlap 4776141 GCCCTGTAAGAATAA TGCCAGGC GGCT GCCTGGCC CATCGACGCAGGAAA TERM 6355 4776158 - 4776141 - GT 80 -12.7 -2.96444 | overlap 4776140 CCCTGTAAGAATAAT GCCAGGC GGCT GCCTGGC CCATCGACGCAGGAA STY4917 4777736 - 4776186 - | hypothetical protein TERM 6356 4776432 - 4776422 - GH 71 -6.8 -4.19177 | overlap 4776431 ACGCGCCAAGACAAA GCTG AAC CAGC GCCTGCGGATTGCGC TERM 6357 4777641 - 4777655 + gH 86 -7.1 -5.06816 | GTTTTCAGCTTCCAG CGCCA GAAAA TGGCG TTTTTGTTCAGGCGT TERM 6358 4778027 - 4778011 - g 70 -6.5 -4.20084 | overlap 4778016 ATGACTGATTTAAAA GCAAGCA GCC TGCGTGC GCTCAAACTGATGGA TERM 6359 4778524 - 4778498 - g 71 -5.8 -4.26903 | overlap 4778477 4778523 CGGATTTCATCAAAA CCTCTACCGGTA AAG TGCCGGTAAACG CTACGCCGGAAAGCG deoC 4777978 - 4778775 + | deoxyribose-phosphate aldolase TERM 6360 4778944 - 4778930 - g 71 -4.2 -4.60889 | opp_overlap 4778929 AATTATTCGTAAAAA GCGTGA TGG TCATGC GTTGAGTGACGAAGA TERM 6361 4778954 - 4778965 + G 71 -4.4 -4.57482 | opp_overlap 4778958, overlap 4778958 TCATGCGTTGAGTGA CGAA GAAA TTCG TTTCTTTATCAATGG deoA 4778898 - 4780220 + | thymidine phosphorylase TERM 6362 4780507 - 4780486 - g 77 -8 -4.11216 | GCTCTACCGGTAAAA TTGCCGCC GGCATG GACGGCAA CGCGGACGTTATTGG TERM 6363 4780667 - 4780637 - g 77 -7.7 -4.3129 | gap 2 CAGCGACCACGAAAA CAGCTT-CCC-GCAG GAA CTGCTGGATAAGCTG GTAAAACGCGCCAAC deoB 4780272 - 4781495 + | phosphopentomutase deoD 4781705 - 4782424 + | purine nucleoside phosphorylase yafM 4782631 - 4783116 + | hypothetical protein lplA 4784223 - 4783207 - | lipoate-protein ligase A TERM 6364 4783830 - 4783841 + g 83 -7.2 -4.56775 | CGGAGACTTTGCGAT CGCC GTCC GGCG TTTTTACGACCAGAT smp 4784901 - 4784257 - | hypothetical protein serB 4785018 - 4785986 + | phosphoserine phosphatase TERM 6365 4786332 - 4786361 + G 83 -8.5 -4.41494 | gap 1 AGTTTGACCGCGTGC TGG-GCGGCGGGGT GGT ACCCGGCAGCGCCA TTTTGATTGGCGGTA radA 4786070 - 4787452 + | DNA repair protein RadA TERM 6366 4787493 - 4787505 + F 70 -9.1 -3.30124 | opp_overlap 4787480, overlap 4787485 AATTTGCCGGATGGC GACGC AAT GCGTC TTATCCGGCCTACGG TERM 6367 4788481 - 4788462 - g 79 -7.2 -4.4891 | gap 1, opp_overlap 4788462 4788460 4788458 CCGACTACGATAAAA TTGCGC-TG GGT CATGCGCAA TATATTGATTTTGCA nadR 4787603 - 4788835 + | nicotinamide-nucleotide adenylyltransferase TERM 6368 4788876 - 4788844 - T 76 -12 -2.74443 | opp_overlap 4788853, overlap 4788843 4788839 GGGATAAGAACCAAT GCCTGATGCGACGC TTACC GCGTCTTATCAGGC CTACAGTTTCACAAC TERM 6369 4788907 - 4788951 + T 72 -5.6 -4.42806 | gap 1, overlap 4788908 GTATTGGAATCGCTG GGTTTGTAGGCCGGGTAAGCG CAAG CGCC-ACCCGGCATTCAGACG TTTATTTGGCAATAC STY4928 4790620 - 4788953 - | putative ABC transporter ATP-binding protein TERM 6370 4790130 - 4790093 - G 91 -14.1 -3.14132 | gap 1, opp_overlap 4790105 4790106 4790107, overlap 4790095 CGGCTTTTCCAGCAA CAGACGGCACAGCGCCAC GCG GCGGCGCT-CGCCGCCGG ACAGTTTTTCGACTT TERM 6371 4790128 - 4790095 - G 91 -15.3 -3.13403 | gap 1, opp_overlap 4790105 4790106 4790107, overlap 4790093 GCTTTTCCAGCAACA GACGGCACAGCGCCAC GCG GCGGCGCT-CGCCGCC GGACAGTTTTTCGAC TERM 6372 4791483 - 4791466 - g 71 -7.7 -3.92324 | opp_overlap 4791469, overlap 4791467 CGGCGGAATATCAAA CGATCGC CTCA GCGATCA TTACCCTCGCTAATG TERM 6373 4791673 - 4791661 - g 84 -9.1 -4.29227 | opp_overlap 4791666, overlap 4791665 TTAATGAGGAACAAA CGCAG GCG CTGCG CGATATCGTTGCCTG slt 4790829 - 4792766 + | lytic murein transglycosylase TERM 6374 4792907 - 4792933 + G 100 -13.8 -4.1711 | GGAGTTACTCCGTCA GGCATATGCAGA GGA TCTGCATCTGCC TTTATTACAACTGAT trpR 4792824 - 4793150 + | Trp operon repressor TERM 6375 4793845 - 4793815 - g 73 -6 -4.37886 | TTAGGCCGCACAAAA CGCACGGCGGAG ATTATCG CCCAGGCGTGCG GGTGTGATATTACCT gpmB 4793635 - 4794282 + | phosphoglycerate mutase rob 4795148 - 4794279 - | right origin-binding protein creA 4795360 - 4795833 + | hypothetical protein TERM 6376 4796040 - 4796080 + G 81 -8.3 -4.2828 | gap 1, overlap 4796038 4796043 CAGCGGCTTTGAGCT GTGTCGGCAGTTGCTGGA GCGTCA TCCGGCG-CTGCCGATTC TTTTCCTGACTGCCC TERM 6377 4796043 - 4796077 + G 90 -10.8 -4.26327 | gap 1, overlap 4796038 4796040 CGGCTTTGAGCTGTG TCGGCAGTTGCTGGA GCGTCA TCCGGCG-CTGCCGA TTCTTTTCCTGACTG creB 4795846 - 4796535 + | DNA-binding response regulator CreB TERM 6378 4797487 - 4797463 - g 73 -9.1 -3.85817 | opp_overlap 4797474, overlap 4797449 4797464 AGGCGCTGGTAGAAA CCCTGCTGCGC CAG GCGCGGCTGGA AAACCGACAGGATAT TERM 6379 4797776 - 4797789 + G 77 -8.1 -4.10007 | TGGTATTCCTGATTT TGCGC TGCC GCGCA TTTTCGACCGATTCT creC 4796535 - 4797959 + | sensory histidine kinase CreC TERM 6380 4798194 - 4798162 - g 81 -14.2 -2.62616 | gap 1 CTATTCGTCAGAGTA CCAGCGGCCCG-CAA AAGG TTGTCGGCCCGCTGG TGGCGGTTCCGGTGA creD 4798017 - 4799366 + | hypothetical protein TERM 6381 4799468 - 4799488 + T 70 -5.3 -4.46212 | overlap 4799460 4799470 TGGCATTCGCTTGCC CGGCCGTTA CCG TGGCGGCGG TTTTATAGTAGCGCG sthD 4801106 - 4800549 - | putative fimbrial subunit TERM 6382 4803076 - 4803089 + r 72 -6.7 -4.20106 | overlap 4803064 TACCAGGGCGCAGGT TAGCG TATT CGCTA TTTTCCGTCCGGTTT sthB 4804389 - 4803706 - | putative fimbrial chaperone protein sthA 4805005 - 4804460 - | putative fimbrial protein TERM 6383 4805074 - 4805058 - R 72 -5.3 -4.56358 | GATAGCTATATAAAA TAAAATA TTA TATTTTA CTCTGTATGCGCTTC STY4945 4806015 - 4805344 - | putative transcriptional regulator protein STY4946 4806708 - 4806214 - | putative secreted protein TERM 6384 4806372 - 4806327 - G 76 -5.3 -4.70046 | gap 1, overlap 4806332 GAGAAAAGTACAAAA TGCAAGCGGGCGGCGTTTT-AC TGA GCGAAATCGCCGCCTGCCGGAA CTCCTCCCGTCGGGA TERM 6385 4806367 - 4806332 - G 73 -10.4 -3.43261 | gap 1, overlap 4806327 AAGTACAAAATGCAA GCGGGCGGCGTTTT-AC TGA GCGAAATCGCCGCCTGC CGGAACTCCTCCCGT TERM 6386 4806947 - 4806921 - R 95 -13.1 -4.35483 | opp_overlap 4806921 GGGGAGCATAAGAAA CAGCCAGTAAG AATAA CTTACCGGCTG TTTTTACGGTTTGGC TERM 6387 4806921 - 4806947 + r 95 -10.9 -4.70879 | opp_overlap 4806921 GGGGAGCATAAGAAA CAGCCAGTAAG AATAA CTTACCGGCTG TTTTTACGGTTTGGC arcA 4807691 - 4806975 - | two-component response regulator STY4948 4807787 - 4807927 + | hypothetical protein TERM 6388 4808529 - 4808541 + G 74 -7.7 -4.13767 | CCCTTGCCGACGCGC TCCAC GAT GTGGA TTTTACCGTAGCGAC lasT 4808327 - 4809013 + | putative RNA methyltransferase SEQUENCE gi|18466424|ref|NC_003384.1| Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence (length 218160) HCM1.02c 1053 - 742 - | hypothetical protein HCM1.03c 1690 - 1367 - | hypothetical protein insB 2346 - 1876 - | putative IS1 transposase insA 2540 - 2265 - | putative IS1 transposase TERM 1 2686 - 2659 - R 87 -10.7 -4.07535 | opp_overlap 2657 AATTTTTAGAAATAA GCCGGATAAAA AAATAG CTTTATCCGGC ACTCATATTACAACC corA 3644 - 2694 - | magnesium/nickel/cobalt transporter CorA HCM1.08 4014 - 4343 + | hypothetical protein TERM 2 4354 - 4328 - T 95 -12.4 -4.36366 | opp_overlap 4331 TATAAAATATAGAAA GAAGGAGGTTTT CTG AATACCTCCTTC ACTGGCGCTCAGTTC HCM1.10c 4569 - 4363 - | hypothetical protein HCM1.13c 4828 - 4604 - | hypothetical protein TERM 3 4874 - 4853 - H 83 -4.3 -5.4505 | overlap 4856 CTTGTTAATAAAAAA GAAGCCACC GTAA GGTGGCTGA ATAAAGGTTAATGGA TERM 4 4871 - 4856 - H 100 -10.4 -4.81306 | overlap 4853 GTTAATAAAAAAGAA GCCACC GTAA GGTGGC TGAATAAAGGTTAAT HCM1.15c.1N 4885 - 5442 + | hypothetical protein HCM1.17c 5744 - 5484 - | hypothetical protein TERM 5 5841 - 5852 + r 73 -4.4 -4.83615 | overlap 5838 GCCGTGGTTATCCAT TCAC CAGA GTGA TTTTTGTGGGGGATA HCM1.20c 6324 - 5833 - | hypothetical protein TERM 6 6259 - 6234 - G 71 -4.7 -4.58395 | overlap 6235 6256 TTGACGGTTCAAAAA GCTGTTCAATG GTTG CATTGAACCGT TCCGCCGAGCGGAGT HCM1.21c 6637 - 6329 - | hypothetical protein TERM 7 6802 - 6820 + r 77 -10.3 -3.33492 | opp_overlap 6802 TAAAGGCAGAAAAAA GCCTTCC GAAAG GGAAGGC TTATGCACTACATCA TERM 8 6820 - 6802 - R 100 -10.3 -5.33866 | opp_overlap 6802 TAAAGGCAGAAAAAA GCCTTCC GAAAG GGAAGGC TTATGCACTACATCA HCM1.22c 7225 - 6845 - | hypothetical protein HCM1.23c 7596 - 7312 - | hypothetical protein HCM1.24c 7918 - 7598 - | hypothetical protein HCM1.25c 8348 - 7995 - | hypothetical protein HCM1.26c 8972 - 8364 - | hypothetical protein HCM1.27c 9527 - 9003 - | hypothetical protein HCM1.28c 9869 - 9558 - | hypothetical protein TERM 9 9817 - 9793 - G 73 -5 -4.66537 | gap 1, overlap 9794 TCGTCGAAGATAAAA CCCTCTCCGAC CAAC GTCAG-GAGGA CAAAAGGGCCCTCGG TERM 10 9824 - 9834 + g 77 -8.2 -4.18018 | opp_overlap 9823 9824 TCAGGAGGACAAAAG GGCC CTC GGCC TTTTGCGTACCCAGC HCM1.29c 10597 - 9866 - | hypothetical protein TERM 11 10336 - 10316 - G 79 -7.5 -4.45544 | CCCGAGCAATGAAAA CGCCTCACG GAC CGTAATGCG GTCGCCAACTACGCC TERM 12 10419 - 10432 + g 70 -9.5 -3.34517 | overlap 10418 CAGTCATGCGTGTGC CCGCG ATGT CGCGG TGTTTGCGCAGGCCT HCM1.30c 10929 - 10705 - | hypothetical protein TERM 13 10950 - 10969 + r 78 -5.6 -4.90917 | opp_overlap 10952, overlap 10951 10952 AATCCTCTGAATAAT TAGCCCTG TGAT CAGGGCGG TTTTTGATTAAATTT TERM 14 10952 - 10967 + r 71 -10.4 -2.7067 | opp_overlap 10952, overlap 10951 10950 TCCTCTGAATAATTA GCCCTG TGAT CAGGGC GGTTTTTGATTAAAT TERM 15 10967 - 10952 - R 72 -10.4 -2.93073 | opp_overlap 10952 10951 10950 TCCTCTGAATAATTA GCCCTG TGAT CAGGGC GGTTTTTGATTAAAT HCM1.31c 11480 - 11016 - | hypothetical protein TERM 16 11315 - 11304 - G 100 -2.2 -6.36459 | overlap 11309 TGCAACAAAAAAAAA GAAC AGGA GTCC GCCCCATAGAGAATG TERM 17 11397 - 11384 - G 86 -6.7 -5.09762 | opp_overlap 11393 TGGCAACAAATAAAA GAAGG TGCT CCTTC CCAGTAGGTTTATTA HCM1.32c 14038 - 11663 - | hypothetical protein TERM 18 12023 - 12033 + g 90 -8.2 -4.79955 | overlap 12020 CGTCGTTATCCACCC CCCC AGA GGGG TTTTGTTGTAGGTGT HCM1.33c 14727 - 14215 - | hypothetical protein TERM 19 14444 - 14434 - G 70 -6.8 -4.16842 | opp_overlap 14443 GTCACTTTCAATAAA CGCA GCC TGCG ACATGAGAACCTCAA HCM1.34c 15515 - 14709 - | hypothetical protein TERM 20 15717 - 15703 - R 100 -8.5 -5.79595 | opp_overlap 15702 CGGGAAAACAAAAAA CCGCC ACAAG GGCGG AATTTATTAGACGGG HCM1.35c 15934 - 15743 - | hypothetical protein TERM 21 15836 - 15820 - G 80 -8.7 -4.1421 | overlap 15833 CAGACGAAATAACAA GCACCTG ATC CAAGTGC GCTACACCTTCGTCG HCM1.36c 16395 - 16063 - | hypothetical protein TERM 22 16619 - 16601 - R 76 -11.7 -2.71144 | opp_overlap 16598 16597 CAGGGCGCTGAATTA CCGGGCA TCCAT TGCCCGG ACAGTTTATTAAAAA HCM1.38c 18076 - 16895 - | hypothetical protein TERM 23 17392 - 17402 + g 85 -6.8 -4.91109 | CACATAACATCAGTA CCTG GCG CAGG TTTTTGTCATAGACC HCM1.39c 18381 - 18085 - | hypothetical protein HCM1.40c 18912 - 18445 - | hypothetical protein TERM 24 19318 - 19332 + G 73 -9.2 -3.83026 | CCGGGGGGTGGCACA GCGGCG TGA TGCCGC TTTAATCTGGAAAAC HCM1.41 19211 - 19537 + | hypothetical protein HCM1.42 19772 - 20548 + | hypothetical protein TERM 25 20824 - 20794 - g 72 -2.6 -4.83615 | gap 2, opp_overlap 20797, overlap 20767 20797 GATTCCCCAGAAAAA CATCGCGCCCTGAT GGAAG ATCTGGG-GCG-TG TTGTGGCAGAGCATT HCM1.43 20698 - 21474 + | hypothetical protein HCM1.43a 21539 - 21661 + | hypothetical protein HCM1.44 21663 - 22004 + | hypothetical protein HCM1.45 22009 - 22368 + | hypothetical protein HCM1.46 22596 - 23300 + | hypothetical protein HCM1.48c 23752 - 23333 - | hypothetical protein TERM 26 23825 - 23809 - R 100 -13.7 -4.79826 | AGACACTATGAAAAA GCCCCGT AAT ACGGGGC CGGTTCGGAGGCAGT HCM1.49c 26224 - 23840 - | putative periplasmic protein TERM 27 26438 - 26426 - H 78 -5.5 -4.74103 | CCCTTAACGGAAAAA TCCGC AGG GCAGA CGTTTAAAATAGCAA HCM1.50 26475 - 27077 + | putative periplasmic protein HCM1.51 27180 - 27476 + | hypothetical protein HCM1.52 27481 - 27894 + | hypothetical protein HCM1.53 27936 - 28076 + | hypothetical protein repA 28468 - 29349 + | replication initiation protein TERM 28 29356 - 29400 + T 77 -12.1 -2.8001 | AAGCCATGACCGATG CCGGATAATGCACCTGCCTGC CGC GTGGGTGGCTGCGTTACCCGG TATAGTGGACATTCT TERM 29 29512 - 29531 + T 74 -3.6 -5.00616 | overlap 29504 29514 CCTCCTCTTCAGCCT TACACTGA ATAT TTAGTGTG TTTTTTCACCAAAAA HCM1.55c 30432 - 29935 - | putative periplasmic protein HCM1.55ac 30650 - 30447 - | hypothetical protein TERM 30 30573 - 30561 - G 74 -2.6 -5.09426 | overlap 30563 GCGAATGCCAAAAAA CGCC TCAAT GACG GAGGAAAGCGTCACT TERM 31 30943 - 30972 + r 72 -6.4 -4.30576 | opp_overlap 30939, overlap 30945 TTATGAGCAAACCCG CAGCGAGTGGCA GGCCTG TGTCATTCGCAG TTTTACTGATGGGAC TERM 32 31088 - 31070 - R 76 -7.4 -4.27463 | overlap 31067 CAACAACAGAAAGAA GTGGCC CGGACTT GGCCAC CCTACCCTGCTTTTA HCM1.56c 33557 - 31101 - | putative periplasmic protein TERM 33 32218 - 32239 + g 79 -2.9 -5.1861 | overlap 32224 32225 GACCCGGCAGGGATG TTGCAGGTG GCAC CGCCAGTAA TTTTTTGGTCGTAGG TERM 34 33944 - 33971 + r 71 -7 -4.18018 | opp_overlap 33937 33947, overlap 33947 AGGTAAAAGTTGTAA TAACTCCCCG CTCACTGC CGGGGAGTCA TTTTAAATCAGCACG TERM 35 33968 - 33947 - R 72 -8.7 -3.67843 | opp_overlap 33947 33944, overlap 33937 TAAAAGTTGTAATAA CTCCCCG CTCACTGC CGGGGAG TCATTTTAAATCAGC HCM1.56ac 34179 - 34003 - | hypothetical protein TERM 36 34219 - 34200 - R 95 -12.2 -4.18018 | TTCCTTCAGTTAAAA GCGTTCTG CATA CAGAACGC GGACGGAGACGGCAG HCM1.57c 35948 - 34194 - | hypothetical protein TERM 37 36052 - 36036 - R 100 -12.3 -5.69473 | GACAGGACAAAAAAA CCCCTAC ATA GTAGGGG CAACGGGGGGAGAGC HCM1.58c 37291 - 36134 - | putative DNA-binding protein TERM 38 36161 - 36176 + g 80 -4.6 -5.1286 | overlap 36163 TGGGGGTGTTTCGGA TTGCGG TTCT CCGCCA TTTTTATCGTTTTTC TERM 39 37437 - 37417 - H 79 -8.4 -4.35742 | ATTGAACGAGGAAAA TTGTTCTG GCGAT CAGAACAA AAAGAAAAAATAACT TERM 40 37764 - 37777 + G 71 -9.5 -3.53174 | overlap 37761 37776 GGTTGAACCGTTTAT CGGCG GTGG CGCCG TGTTTCTGAACATGT HCM1.59 37651 - 38475 + | putative DNA modification methylase HCM1.60c 39311 - 38490 - | hypothetical protein TERM 41 39045 - 39033 - G 77 -7.7 -4.36596 | GTGATAATCAATAAA TGCCA CTC TGGCA CGACTCAGCCACTCG TERM 42 39359 - 39334 - R 80 -7 -4.63218 | TCCGTTTTAACAAAA TCTCCTTAAC CTATAT GTTAAGAAGA GACAAAAAATTAAAA TERM 43 39485 - 39470 - R 71 -6.8 -4.13767 | overlap 39471 39481 39482 TTTCGGAGTGTAAAA CCGGGT AAAA ACCCGA TGCGTGAGCAACAGA HCM1.61c 40301 - 39594 - | hypothetical protein HCM1.62c 40498 - 40298 - | hypothetical protein HCM1.63c 41592 - 40516 - | hypothetical protein repA2 42127 - 43002 + | replication initiation protein TERM 44 43056 - 43071 + F 74 -3.3 -4.96106 | TAATGAGGAGTATGG GCATT CATCCA AATGC TTTTTAATGTTTCTC TERM 45 43624 - 43609 - f 74 -3.3 -5.00616 | opp_overlap 43594, overlap 43594 TGCCTTTTGAAAAAA GCATT TGTATG AATGC TGCGGTGAAAGTTGC TERM 46 44165 - 44135 - f 84 -7.5 -4.87786 | opp_overlap 44133 44136 44142, overlap 44136 44142 TGAATGCCATAAAAA TGGTAAAGGGGCA GACGA TGCCCCTCTTCCC TATTTGGCATGTTAA TERM 47 44164 - 44136 - f 82 -11 -3.51948 | opp_overlap 44133 44136 44142, overlap 44135 44142 GAATGCCATAAAAAT GGTAAAGGGGCA GACGA TGCCCCTCTTCC CTATTTGGCATGTTA TERM 48 44158 - 44142 - f 76 -9.4 -3.82067 | opp_overlap 44136 44133 44142, overlap 44136 44135 CATAAAAATGGTAAA GGGGCA GACGA TGCCCC TCTTCCCTATTTGGC TERM 49 44398 - 44438 + G 74 -4.8 -4.77442 | opp_overlap 44400, overlap 44399 44400 44402 GAAAGAGGAAAAACT AACGCTTTTGCATTTTTG AAGTC CAAACATGCAAAAGTGCC TTTGTTTATTCTCTT TERM 50 44436 - 44400 - g 80 -10.3 -3.87412 | opp_overlap 44399 44398 44400 44402 AAGAGGAAAAACTAA CGCTTTTGCATTTTTGA AGT CCAAACATGCAAAAGTG CCTTTGTTTATTCTC TERM 51 44400 - 44436 + G 72 -11.8 -2.64788 | opp_overlap 44400, overlap 44399 44398 44402 AAGAGGAAAAACTAA CGCTTTTGCATTTTTG AAGTC CAAACATGCAAAAGTG CCTTTGTTTATTCTC trhA 44356 - 44709 + | putative pilin precursor TERM 52 44752 - 44726 - f 95 -13 -4.02817 | opp_overlap 44724 44723 44732, overlap 44729 44730 TTGTTAGAACAATAA CAATGAGGGGGA TAT TCCCCCTCTCTG GAGTTTTTATGACAA TERM 53 44749 - 44729 - g 88 -11.1 -4.13244 | opp_overlap 44724 44723 44732, overlap 44726 44730 TTAGAACAATAACAA TGAGGGGGA TAT TCCCCCTCT CTGGAGTTTTTATGA TERM 54 44748 - 44730 - g 91 -14.6 -3.06862 | opp_overlap 44724 44723 44732, overlap 44729 44726 TAGAACAATAACAAT GAGGGGGA TAT TCCCCCTC TCTGGAGTTTTTATG TERM 55 44732 - 44746 + G 71 -11.4 -2.96009 | opp_overlap 44730 44729 44726, overlap 44724 44723 GAACAATAACAATGA GGGGGA TAT TCCCCC TCTCTGGAGTTTTTA TERM 56 44996 - 44986 - g 76 -5.4 -4.71222 | AGAGGAAAACTAAAA CACA AAC TGTG GTGGTACGGCTTTTT trhL 44728 - 45078 + | putative plasmid transfer protein trhE 45078 - 45875 + | putative pilus assembly protein HCM1.71 45878 - 47110 + | putative periplasmic protein HCM1.72 47112 - 47552 + | hypothetical protein TERM 57 48386 - 48373 - g 79 -3.1 -5.14965 | ATGCGCATTAAAAAA GACAT CATC ATGCC TAACAATTACACGAT trhB 47542 - 48900 + | putative plasmid transfer protein HCM1.74 48909 - 49421 + | hypothetical protein HCM1.75 49422 - 50279 + | putative plasmid transfer protein TERM 58 50814 - 50803 - g 90 -4.4 -5.41746 | opp_overlap 50803 AAGTCGTGAAAAAAA CAAC TCAG GTTG TTACTCCCGCGCCTG TERM 59 51108 - 51090 - g 70 -8.8 -3.66654 | TATGTGAATGTCAAA CCGCAAAC TTG GATTGCGG GCAAAAATTCAACAT trhV 50289 - 51239 + | putative plasmid transfer protein TERM 60 53399 - 53387 - g 74 -6.9 -4.2461 | ATGTTTATCAAGAAA GACGG ACG CCGCC GGTTGTTCATACTTG trhC 51248 - 53929 + | plasmid transfer protein TERM 61 55515 - 55560 + F 89 -6.2 -5.41143 | overlap 55517 ATTGCCAAATATTTT TTGGGTATTCGGGATGTCTT AACAAC AGGATTTGCCGAATACCCTA TTTTTTTGCCAAATA TERM 62 55517 - 55558 + F 83 -8.8 -4.34482 | overlap 55515 TGCCAAATATTTTTT GGGTATTCGGGATGTCTT AACAAC AGGATTTGCCGAATACCC TATTTTTTTGCCAAA TERM 63 55745 - 55775 + F 73 -11.1 -2.72144 | opp_overlap 55746, overlap 55744 CCCCTTTAGCCAATG ACCACGGTGCCTG CTGGT CGGGTACCGTGGG ATTTAACCCCCATAA TERM 64 55774 - 55746 - f 71 -10.2 -2.75064 | opp_overlap 55745 55744 CCCTTTAGCCAATGA CCACGGTGCCTG CTGGT CGGGTACCGTGG GATTTAACCCCCATA TERM 65 57898 - 57876 - g 91 -7 -5.21709 | overlap 57879 TTGGATATCAAAAAA TCAGAAGAGC TCT GCTCTCCCAA ACAGCTTGATGTTGC HCM1.86 56742 - 57995 + | putative plasmid partition protein HCM1.87 57992 - 58999 + | putative plasmid partition protein TERM 66 59033 - 59010 - T 100 -9.6 -5.48054 | opp_overlap 59008, overlap 59012 ATTAAAATCAAAAAA TATCCGCATC ATTA GATGCGGATG AAATTATTCATGTAC TERM 67 59031 - 59012 - T 95 -12.2 -4.35313 | opp_overlap 59008, overlap 59010 TAAAATCAAAAAATA TCCGCATC ATTA GATGCGGA TGAAATTATTCATGT TERM 68 59173 - 59155 - T 86 -14.6 -2.72344 | opp_overlap 59151 CGGTATTGTTAAGCA GGCCCCAA AGA TTGGGGCC TAGAAGTGTTATTGA HCM1.88c 59574 - 59182 - | putative periplasmic protein HCM1.89c 60092 - 59571 - | putative lipoprotein TERM 69 59775 - 59736 - G 71 -6 -4.258 | gap 1, overlap 59737 TGAGTTATTAATAAA TGTTAATTGGTCATTGTTA TCG TAACAAAGACCAAGTAA-A CCAACTGTGGGCACC HCM1.90c 60924 - 60085 - | putative periplasmic protein TERM 70 60899 - 60886 - G 71 -4.5 -4.67353 | GGATGGACCTAAAAA TGCCA GCAA CGGCA AAATTATCAGTTCTA HCM1.91c 61895 - 60924 - | hypothetical protein HCM1.92 62245 - 63279 + | putative plasmid stability/partition protein HCM1.93 63323 - 64000 + | hypothetical protein TERM 71 63997 - 63979 - f 79 -9.6 -3.77241 | opp_overlap 63989 AAAGGCCAATGCAAA CCTCGCAA ATC TTGCGAAG TAAGTATAGTAATAT TERM 72 64035 - 64076 + F 73 -9.7 -3.39288 | opp_overlap 64041 64047 64049, overlap 64047 TTAGATTGAGTTATC TATTAATAAAAAGTCAGCT TACC AGCTGGCTTTTTTTTGGTA TATTATTAACAGGTG TERM 73 64047 - 64064 + F 100 -7.7 -5.92337 | opp_overlap 64041 64047 64049, overlap 64035 ATCTATTAATAAAAA GTCAGCT TACC AGCTGGC TTTTTTTTGGTATAT TERM 74 64064 - 64047 - f 82 -5.5 -5.14163 | opp_overlap 64047 64035, overlap 64041 64049 ATCTATTAATAAAAA GTCAGCT TACC AGCTGGC TTTTTTTTGGTATAT htdA 64566 - 65018 + | transfer repressor htdF 65008 - 65442 + | putative periplasmic protein TERM 75 65784 - 65805 + G 91 -11.5 -4.25104 | opp_overlap 65783 65782 AAAAATATCAATATC GGCCCCAAC GACC GTGGGGGCC TTTTGGTAAGCGCAA htdK 65439 - 66002 + | hypothetical protein TERM 76 66132 - 66151 + G 73 -5 -4.57791 | opp_overlap 66132 TCGTCATGAGAAAAT CAGGTTTA TGTT TAACCCTG TTGTTTTCTTTAATT TERM 77 67882 - 67869 - g 71 -4.5 -4.63218 | opp_overlap 67879, overlap 67879 GGTTCTTCAATAAAA CAGGC GATA ACCTG CTCGACTATCAGGTC HCM1.97 66122 - 70420 + | putative periplasmic protein TERM 78 70464 - 70439 - f 79 -8.9 -4.09923 | opp_overlap 70441, overlap 70441 AAGCTAATGAAATAA CAGCCGGGGCA GAAA TGTCCCGGCTT TTTTGTTTTTCACTT TERM 79 70441 - 70462 + F 100 -13.7 -5.93252 | opp_overlap 70441 70439 GCTAATGAAATAACA GCCGGGGCA GAAA TGTCCCGGC TTTTTTGTTTTTCAC TERM 80 70462 - 70441 - f 82 -11.5 -3.63298 | opp_overlap 70441, overlap 70439 GCTAATGAAATAACA GCCGGGGCA GAAA TGTCCCGGC TTTTTTGTTTTTCAC trhF 70694 - 71206 + | putative pilin maturation protein trhW 71193 - 72701 + | plasmid transfer protein trhU 72891 - 73898 + | plasmid transfer protein TERM 81 75838 - 75828 - g 77 -4 -5.093 | CCCAAAAGAAGAAAA CAAA GAT TTTG GGAAAGTGGCCGCGT TERM 82 76671 - 76651 - g 76 -3.3 -5.03747 | AAATGTGTTAAAAAA GCAACAG ACATGTG CTGTTAC AATTCAATGTTATCT trhN 73921 - 77097 + | conjugal transfer mating pair stabilization protein TraN HCM1.102 77433 - 78419 + | hypothetical protein HCM1.103 78416 - 80455 + | putative DNA helicase HCM1.104c 80712 - 80458 - | hypothetical protein TERM 83 80979 - 80961 - R 80 -9.6 -3.8647 | opp_overlap 80975 ACGCAGCAGAGTAAA CGGCAAAA TGA TCTTGCCG AAGTCGGTATGCTTG TERM 84 81208 - 81233 + r 93 -10.5 -4.38472 | opp_overlap 81213, overlap 81213 ATTGCAAATAGCCAA AAAAAGGGGCT GTAA AGCCCCTTTTG TTATTTTGATTTCAG TERM 85 81213 - 81228 + r 100 -10.4 -5.10656 | opp_overlap 81213, overlap 81208 AAATAGCCAAAAAAA GGGGCT GTAA AGCCCC TTTTGTTATTTTGAT TERM 86 81228 - 81213 - R 100 -10.4 -5.54264 | opp_overlap 81213 81208 AAATAGCCAAAAAAA GGGGCT GTAA AGCCCC TTTTGTTATTTTGAT HCM1.106c 82106 - 81234 - | putative lipoprotein TERM 87 83980 - 83993 + G 72 -2.3 -4.85782 | CTGCATGTAATGTGG TACGG TGAT CCGTC TTTCTTTTTAAGCGA trhI 82288 - 84072 + | putative DNA helicase TERM 88 84152 - 84170 + F 72 -9 -3.60792 | opp_overlap 84156 GCTCCCACATTTCAA GTAACTTT ATA AAAGTTAC TTTGCGCGTTAAGCG TERM 89 84228 - 84265 + F 86 -12.1 -3.65425 | opp_overlap 84221 84222 TTTCTAAAGCTGCAA GGCACCACCGGCAAA ATGTCACC TTTGTCGCTGGTGCC TTTCCCATGTCTGAA TERM 90 84316 - 84333 + F 72 -5.6 -4.43879 | opp_overlap 84305 84318 AAATCGTAACTAACT TAGCTC TTAATT GAGCTA TTTTCGTTGCGTACT HCM1.108 84470 - 85345 + | hypothetical protein HCM1.109 85404 - 85781 + | hypothetical protein TERM 91 85830 - 85800 - f 87 -9.7 -4.26079 | opp_overlap 85791 85801 85805, overlap 85790 85793 85801 TTAAACCACCCAAAA GGGGAGAAATCCC TTCAT GGGAGTTCTCCCT TAGGAGATCCCATGA TERM 92 85829 - 85801 - f 83 -13.2 -3.14924 | opp_overlap 85801 85791 85805, overlap 85790 85793 85800 TAAACCACCCAAAAG GGGAGAAATCCC TTCAT GGGAGTTCTCCC TTAGGAGATCCCATG TERM 93 85882 - 85858 - g 77 -4.9 -4.88687 | opp_overlap 85870, overlap 85859 TGAAACAAAAAATAA GGCCGACTGCA TTT TGCAGTAAGCA AATGGATTTTTTCTC TERM 94 86430 - 86413 - g 89 -2.7 -5.45726 | opp_overlap 86402, overlap 86428 CAGAGCTTAAAAAAA GCTTATA TGAA TATACGC ACAGTTACGGAGGTG HCM1.110 85842 - 86828 + | hypothetical protein TERM 95 86838 - 86868 + F 71 -6.9 -4.10855 | gap 1, opp_overlap 86831 86829 86847, overlap 86839 CACTAACATGCCACT GGCAAACATCTGCC AGCG GGCGG-TGTTTGCA TTTTACCGGAGTTTT TERM 96 86839 - 86867 + F 73 -10.4 -3.0579 | gap 1, opp_overlap 86831 86829 86847, overlap 86838 ACTAACATGCCACTG GCAAACATCTGCC AGCG GGCGG-TGTTTGC ATTTTACCGGAGTTT HCM1.111 86888 - 87940 + | hypothetical protein HCM1.112 87979 - 88248 + | hypothetical protein TERM 97 88285 - 88258 - f 79 -12 -3.29038 | opp_overlap 88256 88264 88265 88272, overlap 88272 AAGTAATATTATTAA CCCTATCGGGAA ATCT TTCCCGACGGGG AGGTTTTCCCATTTC TERM 98 88264 - 88296 + F 77 -9.1 -3.95073 | opp_overlap 88258 88272, overlap 88256 88265 88272 TATTATTAACCCTAT CGGGAAATCTTTCCC GAC GGGGAGGTTTTCCCA TTTCTAAATCTGGAG TERM 99 88265 - 88295 + F 80 -12.6 -2.96722 | opp_overlap 88258 88272, overlap 88256 88264 88272 ATTATTAACCCTATC GGGAAATCTTTCCC GAC GGGGAGGTTTTCCC ATTTCTAAATCTGGA TERM 100 88272 - 88288 + F 72 -6.5 -4.26189 | opp_overlap 88258 88272, overlap 88256 88265 88264 ACCCTATCGGGAAAT CTTTCCC GAC GGGGAGG TTTTCCCATTTCTAA TERM 101 88531 - 88521 - g 70 -6.8 -4.08394 | AGAGCGTGTCTAAAA GCGA AGT TCGC TGGATAGACATAAAG HCM1.114 88319 - 89446 + | hypothetical protein TERM 102 89495 - 89465 - f 71 -7.7 -3.90316 | gap 1, opp_overlap 89474, overlap 89463 AGTCTTGTAAAAATA TC-CCCAGATGG GTACTTCA CCATCTGGGTGA GTACCCTTTATCAAA TERM 103 89474 - 89501 + F 84 -10.7 -3.89346 | gap 1, opp_overlap 89465 89463 AAAATATCCCCAGAT GGGTACTTCACC ATCTG GGTGA-GTACCC TTTATCAAATAAAGG HCM1.116 89524 - 91536 + | hypothetical protein HCM1.116a 91608 - 91829 + | hypothetical protein TERM 104 91834 - 91855 + F 93 -12.3 -3.75766 | CTGAAGCGTAATTGT TGAGGGCTC TTGT GGGCCCTCA TTCTTAGATTCTGCG TERM 105 92716 - 92694 - g 71 -8.3 -3.80862 | opp_overlap 92693 AAACTGATGATGAAA CCGCCTGCC GATAT GACTGGCGG CTCAATTCAGCTGTA HCM1.117 91923 - 93176 + | hypothetical protein TERM 106 93181 - 93218 + F 88 -12.2 -3.61641 | gap 2, opp_overlap 93186, overlap 93179 93185 93186 93210 CTCAGCTTTAAATCC GATAA-CTCCCCC-GCCT TTTC AGGCCGGGGGGGGTTATC TCTTTAGTGTTTATT TERM 107 93185 - 93213 + F 76 -8.8 -3.79021 | gap 1, opp_overlap 93186, overlap 93181 93179 93186 93210 GCTTTAAATCCGATA ACTCCCCC-GCCT TTTC AGGCCGGGGGGGG TTATCTCTTTAGTGT TERM 108 93186 - 93212 + F 79 -12.3 -2.86328 | gap 1, opp_overlap 93186, overlap 93185 93181 93179 93210 CTTTAAATCCGATAA CTCCCCC-GCCT TTTC AGGCCGGGGGGG GTTATCTCTTTAGTG TERM 109 93211 - 93186 - f 77 -10.3 -3.39668 | opp_overlap 93186 93185 93181 93179 93210 CTTTAAATCCGATAA CTCCCCCGCCT TTTC AGGCCGGGGGG GGTTATCTCTTTAGT TERM 110 93280 - 93292 + F 89 -4.8 -5.76949 | opp_overlap 93280 CCTTCGTGAAAATCA CCTG TTATT CAGG TTTTTTTTACGGCTG TERM 111 93626 - 93600 - g 78 -2.1 -5.26155 | AGATAAAGACAAAAA CCTGTTGTACG TTATT CGTCCTTCAGG AACCTGTTTGTTGCG HCM1.118 93451 - 93975 + | hypothetical protein TERM 112 94379 - 94393 + G 74 -7.2 -4.11216 | GCAACAGCGGTTTGA GAAAAG TAA CTTTTC TTTTCGAACTGAAGA TERM 113 94807 - 94824 + G 70 -2.7 -4.82901 | overlap 94808 AAAATGGACGGTCTC TTGGTAA GTCA TTACCAC TTTTTATAAAAGAGA HCM1.119 93966 - 94931 + | hypothetical protein TERM 114 94941 - 94968 + F 74 -11.4 -2.83082 | gap 1, opp_overlap 94938 94941, overlap 94939 94948 94949 TTCTGATTAACATTA CCCATCCGGGGAT TAC ATCCCT-GATGGG TGTAATCCCATTTTT TERM 115 94948 - 94978 + F 100 -10.5 -5.65927 | opp_overlap 94941 94938, overlap 94939 94941 94949 TAACATTACCCATCC GGGGATTACATCC CTGAT GGGTGTAATCCCA TTTTTTATTTAAGTG TERM 116 94949 - 94977 + F 100 -14 -3.9793 | opp_overlap 94941 94938, overlap 94939 94941 94948 AACATTACCCATCCG GGGATTACATCC CTGAT GGGTGTAATCCC ATTTTTTATTTAAGT TERM 117 95392 - 95402 + G 72 -2.4 -4.83615 | TTGCTACATCTGACC CGAC AAG GACG TTTTTGTGAAGACTA HCM1.120 95002 - 95937 + | hypothetical protein TERM 118 95967 - 95994 + F 80 -12.8 -3.01791 | opp_overlap 95960 95972, overlap 95960 95959 95973 TTATCTAATCCCTGA GGGAATTCTTCC CTTG GGGAGGATTCCC TCTTAACCGAGGGCT TERM 119 96486 - 96504 + G 80 -8.8 -4.14392 | opp_overlap 96490 TTACGCTCGCGCTTA TCAACGGC TTT GCCGCTGA TTTTCGCAGTTACAG TERM 120 96891 - 96872 - g 71 -7.2 -3.95219 | opp_overlap 96872 96875, overlap 96875 TCGAAAGGCTATAAA TAACTCGC TTAA GCAAGTTA ATTCGTATGCTCCAG HCM1.121 96015 - 96935 + | hypothetical protein TERM 121 96953 - 96982 + F 76 -7.9 -4.3255 | gap 1, overlap 96945 96964 AATTTTACCCATTGG GGAAGCGTATTCCC CGT GGGGGT-TGCTTCC TTTCTTCATTAAAGA TERM 122 97267 - 97243 - g 77 -7.3 -4.25104 | opp_overlap 97250, overlap 97265 TCCTTCGGACTAAAA TCAAATACTTT CTT AAAGTATATGA AAAGTCTGGTTTTCA HCM1.122 97008 - 97943 + | hypothetical protein TERM 123 98087 - 98060 - f 80 -13.4 -2.53581 | opp_overlap 98056 98068 CATATTTTTAATCCA CCCACTGGGGAA GTCG CTCCCCTGTGGG GCACTTCCTTTAATA TERM 124 98068 - 98095 + F 72 -8.5 -3.80573 | gap 1, opp_overlap 98060, overlap 98056 TAATCCACCCACTGG GGAAGTCGCTCC CCTGT GGGGC-ACTTCC TTTAATAATCCTGAG HCM1.123 98120 - 99076 + | hypothetical protein TERM 125 99142 - 99125 - f 88 -12.7 -3.64487 | opp_overlap 99125 TTATACTTCTAAGAA GGCACGG TTAT CCGTGCC TTTTTTTTTGCTTTC TERM 126 99125 - 99142 + F 100 -12.7 -6.28631 | opp_overlap 99125 TTATACTTCTAAGAA GGCACGG TTAT CCGTGCC TTTTTTTTTGCTTTC HCM1.124 99489 - 99758 + | hypothetical protein HCM1.125 99813 - 100403 + | hypothetical protein HCM1.126 100411 - 100668 + | hypothetical protein HCM1.127 100742 - 101278 + | hypothetical protein HCM1.128 101295 - 101750 + | hypothetical protein HCM1.130 101965 - 102243 + | hypothetical protein HCM1.131 102332 - 103291 + | putative DNA replication terminus site-binding protein HCM1.132 103302 - 104210 + | hypothetical protein HCM1.133 104146 - 104490 + | hypothetical protein HCM1.134c 105696 - 104515 - | putative recombinase HCM1.135 105911 - 106123 + | putative regulatory protein insA 106430 - 106705 + | putative IS1 transposase insB 106624 - 107127 + | putative IS1 transposase TERM 127 107417 - 107430 + F 76 -5.3 -4.87273 | TAGGGGTTATCCACT TATCC ACGG GGATA TTTTTATAAGATCTT TERM 128 107692 - 107666 - f 74 -10.2 -3.14211 | ACTCTGTTTTATGAA GTGTGACAATCT TAA AGTCTGTCACAC TTCACATGGACCTGT rep 107709 - 108464 + | replication protein insA 108842 - 109117 + | putative IS1 transposase insB 109036 - 109539 + | putative IS1 transposase TERM 129 109706 - 109695 - f 71 -3.6 -4.77173 | overlap 109697 GGTGTATAAAACAAA GCCA TTTT CGGC CAAAAAATGAGTCAG HCM1.141 109949 - 111022 + | hypothetical protein HCM1.141ac 111243 - 111100 - | hypothetical protein HCM1.142c 111755 - 111279 - | hypothetical protein HCM1.143 111903 - 112178 + | hypothetical protein HCM1.144 112168 - 112368 + | hypothetical protein HCM1.145 112435 - 112827 + | hypothetical protein TERM 130 112943 - 112957 + F 75 -10 -3.61178 | GACCCATACGTGCTG TCAGGC TTC GCCTGA TTTGAGATCAGTGCA HCM1.146 113240 - 113443 + | hypothetical protein HCM1.149 113598 - 114524 + | hypothetical protein merR 114986 - 114531 - | putative transcriptional regulator MerR TERM 131 114809 - 114795 - G 77 -11.4 -3.59979 | opp_overlap 114793 TTCGTCCAGGCTAAA GCCCAG CCG CTGGGC CGATTTCACGAACCG TERM 132 115102 - 115090 - g 71 -4.7 -4.5442 | opp_overlap 115093, overlap 115091 GTCTGAACCACAAAA CGGGC GCG GCGCG CTCTTCGCCGGTGGG TERM 133 115140 - 115160 + G 81 -8.1 -4.28361 | CCATTCTTGCGTCGG CCTGCTGCC TGG GGCCGCTGG TTTTGATCGCCTTGG TERM 134 115242 - 115258 + G 89 -9.4 -4.62069 | CGATCTTCATCGGCG CAGCGC TGGTC GCGCTG TTTTTCGCCTGGCGG merT 115058 - 115423 + | putative mercuric transport protein merP 115439 - 115714 + | putative mercuric transport protein periplasmic binding protein merC 115742 - 116167 + | putative mercury transport protein MerC TERM 135 116187 - 116159 - f 79 -9.6 -3.8062 | gap 1, overlap 116160 GAATTGCCAGAACAA CGTGGCTGACGGC AACA GCCGT-AGCCACC ACAGAAAAGGAAAAA TERM 136 116186 - 116160 - f 82 -13.1 -2.8789 | gap 1, overlap 116159 AATTGCCAGAACAAC GTGGCTGACGGC AACA GCCGT-AGCCAC CACAGAAAAGGAAAA merA 116206 - 117891 + | putative mercuric reductase merD 117909 - 118274 + | transcriptional regulator MerD HCM1.160 118271 - 118507 + | putative mercury resistance protein HCM1.161 118573 - 118785 + | hypothetical protein HCM1.162c 119787 - 119023 - | putative transposase TERM 137 119160 - 119109 - G 83 -12.8 -3.29043 | opp_overlap 119110 119113 119114 119148 AAGCTCTCTCCACAA GGCGCACCTCGCCCCTGATGCCGG GCTG CAGGCACCAGGGGCGAGCCTGTCC TTTGCGCAGGGCTCG TERM 138 119110 - 119160 + g 85 -12.5 -3.53444 | gap 1, opp_overlap 119109, overlap 119113 119114 119148 AGCTCTCTCCACAAG GCGCA-CCTCGCCCCTGATGCCGG GCTG CAGGCACCAGGGGCGAGCCTGTCC TTTGCGCAGGGCTCG TERM 139 119113 - 119157 + g 86 -15 -2.90496 | gap 1, opp_overlap 119109, overlap 119110 119114 119148 TCTCTCCACAAGGCG CA-CCTCGCCCCTGATGCCGG GCTG CAGGCACCAGGGGCGAGCCTG TCCTTTGCGCAGGGC TERM 140 119114 - 119155 + g 86 -14.3 -3.00525 | opp_overlap 119109, overlap 119113 119110 119148 CTCTCCACAAGGCGC ACCTCGCCCCTGATGCCGG GCTG CAGGCACCAGGGGCGAGCC TGTCCTTTGCGCAGG TERM 141 119262 - 119281 + g 83 -12.2 -3.66732 | GTATCTTGAGCTTTC CGTGATCG GCCT CGATCACG TTATTGAGATACTTC TERM 142 120026 - 120046 + r 89 -9 -4.66609 | opp_overlap 120025, overlap 120041 CACATGGTCCAAATG CTGGTCGA TCCGT TCGGCCAG TTTTTCGATGGCCTC dhfR 120899 - 120417 - | putative dihydrofolate reductase TERM 143 121706 - 121732 + G 71 -10.1 -3.5616 | gap 1, opp_overlap 121705 CTTGAGCGGAAGTAT CCGCGCGCCGGG CATT CCTGGC-CGTGG TTCTGGGTTTTTGCG int 121046 - 122059 + | putative integrase TERM 144 122810 - 122797 - g 75 -6.7 -4.49556 | CGGGGACGAAAGAAA TCGCT GAAC AGCGA ACAAATTGCCGAGTT tnpR 122365 - 122922 + | resolvase tnpA 122925 - 125897 + | transposase TERM 145 126252 - 126242 - f 90 -6.8 -5.28166 | opp_overlap 126245 TAAAAGCAATAAAAA CGAC TTT GTCG ACGCCGAAGCTATTT TERM 146 126780 - 126769 - f 80 -5.8 -4.99035 | overlap 126777 GTATTCATACAAAAA CTGG AACA CCAG TCTGGCAAATTGGCC HCM1.174 127673 - 128164 + | putative periplasmic protein TERM 147 128996 - 128984 - g 70 -6.9 -4.13014 | CGGACACCGTTAAAA CGCCC TGA GAGCG CCACCAGCGAACTGA HCM1.175 128603 - 129409 + | putative DNA-binding protein HCM1.176 129515 - 129934 + | hypothetical protein HCM1.177 130242 - 130691 + | hypothetical protein TERM 148 130706 - 130688 - T 72 -10.4 -2.76689 | opp_overlap 130684, overlap 130685 CAGCAACATACATTA TTAGGCTA CGT TAGCCTAA TGGCATTCTGAAAGT TERM 149 131088 - 131098 + T 72 -5.4 -4.4727 | overlap 131086 ATTTGATAAAGCTTA CTAC AAA GTAG TTTTGTCAATGTTCA TERM 150 131426 - 131401 - T 72 -9.1 -3.64755 | opp_overlap 131406, overlap 131391 131406 ACATAGGCTTAATAA GAAAAGCCACT GAAA AGTGGCTTTTG AACTGAGCTGTTCGC TERM 151 131406 - 131421 + T 79 -9 -4.14243 | opp_overlap 131391 131406 131401 GGCTTAATAAGAAAA GCCACT GAAA AGTGGC TTTTGAACTGAGCTG TERM 152 131421 - 131406 - T 93 -9 -4.89477 | opp_overlap 131406, overlap 131391 131401 GGCTTAATAAGAAAA GCCACT GAAA AGTGGC TTTTGAACTGAGCTG HCM1.178ac 131861 - 131457 - | putative DNA-binding protein TERM 153 131525 - 131539 + g 78 -7.1 -4.55128 | CTTTAGGGGTACGCC CCTGG CCAGT CCAGG TTTTCGTTTCACCAT TERM 154 131581 - 131597 + g 77 -3.5 -5.1101 | overlap 131575 131583 TATTTATATTTCGCA GGGCGCG GTT CGCGAAC TTTTTTAGGTGCTCC HCM1.179c 132395 - 132123 - | hypothetical protein HCM1.180c 133060 - 132392 - | hypothetical protein TERM 155 133223 - 133237 + H 80 -6.4 -4.7339 | opp_overlap 133214, overlap 133224 AATAAACACCCCAGA TGTGAC ACC GTCACG TTTTTCGGCTTTATT HCM1.181 133567 - 134022 + | hypothetical protein HCM1.182 134029 - 134379 + | hypothetical protein TERM 156 134918 - 134904 - g 77 -3.6 -4.99435 | CTGAATAACGAAAAA GTTAAC CTG ATTAAC CTGCTGGAGCAGCAG HCM1.183 134382 - 135602 + | hypothetical protein HCM1.184c 135860 - 135657 - | hypothetical protein HCM1.185c 137193 - 135898 - | hypothetical protein HCM1.186c 137388 - 137218 - | hypothetical protein HCM1.187c 138944 - 137517 - | DNA cytosine methylase HCM1.188 139168 - 139683 + | putative nuclease HCM1.189 139680 - 140612 + | hypothetical protein HCM1.190 140668 - 141447 + | hypothetical protein TERM 157 141907 - 141935 + G 100 -16.3 -3.18383 | opp_overlap 141911, overlap 141896 TTCGTGCTGGTTCAA CTTATCAGCATTT TAA AAATGCTGATAAG TTAGTCAGTGAAGGT HCM1.192 141795 - 142094 + | hypothetical protein TERM 158 142320 - 142338 + T 100 -11.8 -5.49809 | opp_overlap 142320 CTGGTGGTGCGATAA GGTTCTGA TTT TCAGAACC TTTTTTTAAAGTTTA TERM 159 142338 - 142320 - T 79 -11.8 -3.28712 | opp_overlap 142320 CTGGTGGTGCGATAA GGTTCTGA TTT TCAGAACC TTTTTTTAAAGTTTA HCM1.193c 142952 - 142344 - | hypothetical protein HCM1.194 143085 - 144293 + | transposase HCM1.195 144632 - 147967 + | hypothetical protein TERM 160 148781 - 148771 - g 87 -2.4 -5.61596 | AGTTTCAGAAAAAAA GCCC TAA GGGA TGGGACCGGGTTAAC HCM1.196 148734 - 149120 + | hypothetical protein HCM1.197c 149557 - 149132 - | hypothetical protein HCM1.198c 150064 - 149591 - | hypothetical protein TERM 161 149902 - 149914 + g 70 -9.1 -3.68073 | opp_overlap 149899 AAGCCTCGAAATGTT GCTGC TCA GCAGC TTCTTCCATCCAGTC HCM1.199c 150506 - 150147 - | hypothetical protein TERM 162 152303 - 152286 - g 89 -2.7 -5.61596 | gap 1 AGGTCCAGAAAAAAA GGGA-CAA TAA TCGCTCCC AGTCGCTACCTTCAG TERM 163 152422 - 152410 - g 77 -7.7 -4.35604 | overlap 152389 TGAAGCCATAATAAA GCTTC AAG GAAGC TCTGAGGCCATCTTT HCM1.201 151052 - 152449 + | putative transposase TERM 164 153301 - 153291 - g 85 -2.6 -5.46276 | opp_overlap 153291 AATATAGAGAAAAAA TATA AGT TATA TGTTGGAGTGAAAAA HCM1.203 152712 - 153518 + | hypothetical protein insB 154054 - 153551 - | putative IS1 transposase insA 154248 - 153973 - | putative IS1 transposase TERM 165 154574 - 154540 - g 87 -2.3 -5.68039 | gap 1, overlap 154541 AAATGGAGAAAAAAA TCACTG-GATATACCA CCGT TGATATATCCCAATGG CATCGTAAAGAACAT TERM 166 154973 - 154990 + G 71 -4.9 -4.55128 | gap 1, overlap 154961 154976 CGTCTCAGCCAATCC CTGGGTGA GTT TCACC-AG TTTTGATTTAAACGT cat 154527 - 155186 + | chloramphenicol acetyltransferase HCM1.207c 155764 - 155387 - | hypothetical protein HCM1.209c 157079 - 156075 - | putative transposase TERM 167 156210 - 156221 + g 84 -5.8 -4.99035 | overlap 156189 GGCCAATTTGCCAGA CTGG TGTT CCAG TTTTTGTATGAATAC TERM 168 156803 - 156813 + g 91 -6.8 -5.28166 | opp_overlap 156794 AAATAGCTTCGGCGT CGAC AAA GTCG TTTTTATTGCTTTTA TERM 169 158454 - 158470 + H 71 -10.8 -2.73875 | overlap 158450 CGCGGTGTCGGGCAC CGCCGC ATCCA GCGGCG TGATCTTCAAGCCCG TERM 170 159986 - 160010 + G 82 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 171 160141 - 160120 - g 71 -7.9 -3.98172 | gap 1, opp_overlap 160120 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC HCM1.211c.2N 159691 - 160407 + | putative transposase HCM1.213c 161411 - 160707 - | putative transposase TERM 172 160973 - 160994 + g 71 -7.9 -3.98172 | gap 1, opp_overlap 160973 GTTTGAGCAGAGCAA GCGCGCGACC ATA GG-CGGGCGC TTTATCCGTGTTGAT bla 161911 - 162771 + | beta-lactamase TERM 173 162836 - 162853 + F 78 -5.6 -4.79223 | opp_overlap 162836 ATTTTTAATTTAAAA GGATCT AGGTGA AGATCC TTTTTGATAATCTCA TERM 174 163652 - 163676 + G 82 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 175 163807 - 163786 - g 71 -7.9 -3.98172 | gap 1, opp_overlap 163786 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC HCM1.219 163369 - 164073 + | putative transposase TERM 176 164323 - 164297 - f 71 -10.1 -3.14931 | CTCAGCGCCGAGGAA CGGCAAGCCGT GGCTG ACGGCCTGCTG ATCCAGCCGCTGATC HCM1.221 164829 - 165680 + | putative replication protein TERM 177 166509 - 166521 + G 79 -3.3 -5.24531 | overlap 166510 CCGCCTTGTCCTTGA TCCCG GCA TGGGG TTTTTTCTGGGGGCT HCM1.222 165988 - 166803 + | dihydropteroate synthase strA 166864 - 167667 + | streptomycin phosphotransferase TERM 178 168374 - 168400 + G 73 -10.2 -3.38564 | gap 1, overlap 168363 GCTGGACGTCGATCC GCGT-CGCCTG CTCGAC CAGGCGTACGC TTATGGGTGCCTTTC strB 167667 - 168503 + | streptomycin phosphotransferase TERM 179 168830 - 168851 + G 71 -7.9 -3.98172 | gap 1, opp_overlap 168830 GTTTGAGCAGAGCAA GCGCGCGACC ATA GG-CGGGCGC TTTATCCGTGTTGAT TERM 180 169312 - 169289 - g 71 -6 -4.30576 | GCTCCATCAGCAAAA GGGGATGATA AGTT TATCACCACC GACTATTTGCAACAG HCM1.225 168741 - 169361 + | putative transposase TERM 181 169461 - 169421 - T 79 -11.3 -3.41693 | gap 2, overlap 169424 TCGACCAGGAACGAA GTAGCGCGTGT-GACG-AC GGCCG GTACGCCGACACGCGCCAC GGCCTCGGCCCAGCG TERM 182 170000 - 170030 + T 100 -17 -2.90797 | overlap 169994 ATAGGTTGCCGGTCG CGGTCATCGACC ACGATCA GGTCGATGACCG TATGGTCTATCTGCA HCM1.227c 171365 - 170658 - | hypothetical protein HCM1.229c 171598 - 171362 - | putative mercury resistance protein merD 171957 - 171595 - | transcriptional regulator MerD merA 173669 - 171975 - | putative mercuric reductase TERM 183 172239 - 172206 - G 76 -11.7 -3.15861 | gap 1, opp_overlap 172204 172202 CACCAGTTTGATGAA GCCGCGCGTG-TCG AAGTTGG CGAGCGCGCGCGGC ACGTTGTCCAGCGTT merC 174143 - 173721 - | putative mercury transport protein MerC merP 174454 - 174179 - | putative mercuric transport protein periplasmic binding protein merT 174818 - 174468 - | putative mercuric transport protein merR 174890 - 175324 + | putative transcriptional regulator MerR TERM 184 176272 - 176261 - g 84 -5.8 -4.99035 | overlap 176269 GTATTCATACAAAAA CTGG AACA CCAG TCTGGCAAGTTGGCC HCM1.236 175403 - 176407 + | putative transposase insB 177261 - 176758 - | putative IS1 transposase insA 177455 - 177180 - | putative IS1 transposase TERM 185 177869 - 177895 + r 72 -8.1 -3.81488 | gap 1, opp_overlap 177869 177871, overlap 177871 CTTTATCGTAAAAAA TG-CCCTCTTGG GTTA TCAAGAGGGTCA TTATATTTCGCGGAA TERM 186 177895 - 177869 - R 88 -7.4 -5.0538 | gap 1, opp_overlap 177869 177871, overlap 177871 CTTTATCGTAAAAAA TG-CCCTCTTG GGTTAT CAAGAGGGTCA TTATATTTCGCGGAA TERM 187 177871 - 177892 + r 75 -10.9 -2.99057 | opp_overlap 177869 177871, overlap 177869 TTATCGTAAAAAATG CCCTCTTGG GTTA TCAAGAGGG TCATTATATTTCGCG TERM 188 177892 - 177871 - R 72 -10.2 -2.77166 | opp_overlap 177871 177869, overlap 177869 TTATCGTAAAAAATG CCCTCTTG GGTTAT CAAGAGGG TCATTATATTTCGCG tetA 179140 - 177935 - | tetracycline resistance protein TERM 189 178300 - 178314 + g 74 -2.1 -5.01732 | gap 1 TATCTGCAATAAATC CGAGCA GTAC TGC-CG TTTTTTCGCCCCATT TERM 190 179196 - 179180 - H 83 -9.5 -4.18506 | GGAGTGGTAAAATAA CTCTATC AAT GATAGAG TGTCAACAAAAATTA tetR 179219 - 179845 + | tetracycline repressor protein TetR HCM1.244c 180509 - 179823 - | putative transcriptional regulator HCM1.245c 180903 - 180517 - | hypothetical protein HCM1.246c 181216 - 180896 - | hypothetical protein TERM 191 181002 - 181016 + g 70 -2.8 -4.74103 | overlap 181003 TCTTGTTGAGCTTTC GCATGT AAA ACATGA TTTTTCCATTGCAGA TERM 192 181768 - 181782 + H 72 -5.6 -4.4634 | AACCACATACCAGAA GCCGTC GTT GGTGGC TTTATTGTTGCAATT HCM1.248 183095 - 183220 + | putative transcriptional regulator HCM1.249c 184438 - 183230 - | transposase HCM1.250c 184858 - 184508 - | putative periplasmic protein HCM1.251c 185620 - 185006 - | hypothetical protein mucA 185798 - 186232 + | putative DNA-repair modulator TERM 193 186751 - 186735 - g 90 -5.1 -5.26875 | TTCCGAATTAAAAAA CTGCTGA GTC TCATCAG TACCCGGGAAATCTG mucB 186216 - 187475 + | putative DNA-repair modulator HCM1.254c 188336 - 187527 - | putative outer membrane protein TERM 194 188224 - 188237 + g 71 -5.9 -4.323 | CCTATTTCGTCGTTA CCCGG TACA TCGGG TTTTAGATATTTCGA HCM1.255 188443 - 189054 + | putative lipoprotein HCM1.256c 189535 - 189113 - | hypothetical protein HCM1.257c 189950 - 189558 - | puatative periplasmic protein HCM1.258c 190725 - 189976 - | putative thiol:disulfide interchange protein TERM 195 190360 - 190371 + g 72 -2.2 -4.8622 | AATATCCGTAAACAC TGCC AGAC GGTA TTTTTCATTCGCCGA HCM1.259 190873 - 191388 + | hypothetical protein HCM1.261 191440 - 192003 + | hypothetical protein TERM 196 192250 - 192275 + T 77 -9 -3.90318 | opp_overlap 192250 ATGCAAGCAAAAAAA GACCGTACTC AAAAGA GAGTACGGCC TTTATCAGCTACTAC TERM 197 192275 - 192250 - T 100 -11.2 -5.64006 | opp_overlap 192250 ATGCAAGCAAAAAAA GACCGTACTC AAAAGA GAGTACGGCC TTTATCAGCTACTAC HCM1.262 196286 - 192297 - | hypothetical protein TERM 198 193447 - 193476 + g 77 -7.9 -4.36914 | opp_overlap 193456, overlap 193456 CCAGACTCAGTTTGT CCACCAACATGCT GGTT AGCATTTTGTTGG TTTTGTACCAGCCCG TERM 199 193456 - 193467 + g 77 -4.4 -4.90918 | opp_overlap 193456, overlap 193447 GTTTGTCCACCAACA TGCT GGTT AGCA TTTTGTTGGTTTTGT TERM 200 196166 - 196149 - G 75 -6.9 -4.37886 | overlap 196133 196151 CCACGTTTTATAAAA CAGGCTG GCTC CAGCCAG TACCGCTGCCGTCGT TERM 201 196164 - 196151 - G 71 -8.1 -3.79687 | overlap 196133 196149 ACGTTTTATAAAACA GGCTG GCTC CAGCC AGTACCGCTGCCGTC HCM1.263c 197710 - 196295 - | putative pilus assembly protein TERM 202 196420 - 196433 + g 70 -6.7 -4.14243 | CATAGGCAGCTTTTA CCTGA TTGG TCAGG TTTTCAGATAACCTA HCM1.264c 198746 - 197700 - | putative pilus assembly protein TERM 203 198626 - 198612 - G 83 -5.7 -4.95155 | opp_overlap 198611 GTCATACCAGAAAAA GCCTT TCTTG AAGGC CTGTCCTGATACAAA HCM1.266c 199870 - 199358 - | hypothetical protein TERM 204 199501 - 199524 + g 74 -3.2 -4.90778 | overlap 199511 GCTCCTCGATTTCTT TCATTGACGT TAGA ATCTCAATGA TTTTATTTACCTCAG TERM 205 199685 - 199660 - G 71 -10.5 -3.28912 | opp_overlap 199663, overlap 199663 TTACAGCGACATCAA TAACCGCAGAA AAAG CCCTGCGGTTA TCCGTGCGGCGACTC TERM 206 199714 - 199724 + g 72 -4 -4.68103 | TCCACCCACGAATCC CTTT TTT AAAG TTTTGTTGAGGTTCA TERM 207 199771 - 199793 + g 76 -3.4 -5.06414 | overlap 199772 TTTCGGCAACATGAT TTCCATAGAG TAT CCTTATGGAG TTTTTATTGGCACCA HCM1.268c 200673 - 199873 - | hypothetical protein TERM 208 201033 - 201003 - H 74 -11.3 -2.84459 | opp_overlap 201025, overlap 200992 201005 201025 AACATGACTACTACA TAGGGTCACTTTT TGCTG AAAAGTGGCCCTA TGCACCATCGACATA TERM 209 201031 - 201005 - H 70 -9.5 -2.96692 | opp_overlap 201025, overlap 201003 200992 201025 CATGACTACTACATA GGGTCACTTTT TGCTG AAAAGTGGCCC TATGCACCATCGACA TERM 210 201025 - 201055 + H 76 -9.1 -3.72027 | opp_overlap 201005 201003 200992 201025 201049, overlap 201047 201049 ACTTTTTGCTGAAAA GTGGCCCTATG CACCATCGA CATAGGGTCAC TTCTTGATGAAAAGT TERM 211 201055 - 201025 - H 73 -7.6 -4.07687 | opp_overlap 201025 201047 201049, overlap 201005 201003 200992 201049 ACTTTTTGCTGAAAA GTGGCCCTATGC ACCATCG ACATAGGGTCAC TTCTTGATGAAAAGT TERM 212 201047 - 201077 + H 77 -12 -2.78596 | opp_overlap 201025 201049 201069, overlap 201025 201049 201069 TATGCACCATCGACA TAGGGTCACTTCTT GAT GAAAAGTGACCCTA TGTAATCACGACATA TERM 213 201049 - 201075 + H 73 -10.2 -2.94099 | opp_overlap 201025 201049 201069, overlap 201025 201047 201069 TGCACCATCGACATA GGGTCACTTCTT GAT GAAAAGTGACCC TATGTAATCACGACA TERM 214 201075 - 201049 - H 77 -11.7 -2.92463 | opp_overlap 201025 201049 201047 201069, overlap 201025 201069 TGCACCATCGACATA GGGTCACTTCT TGATG AAAAGTGACCC TATGTAATCACGACA TERM 215 201069 - 201099 + H 100 -14.2 -5.42259 | opp_overlap 201049 201069 201083 201086, overlap 201049 201047 ACTTCTTGATGAAAA GTGACCCTATGT AATCACG ACATAGGGTCAC TTTTTTTAAAAGTGG TERM 216 201099 - 201069 - H 100 -14.2 -4.25283 | opp_overlap 201049 201047 201069, overlap 201049 201083 201086 ACTTCTTGATGAAAA GTGACCCTATGT AATCACG ACATAGGGTCAC TTTTTTTAAAAGTGG TERM 217 201707 - 201697 - g 74 -3.2 -4.83615 | TAGCCCGTATAAAAA CAGG CCA CCTA GTCATATGTCGAAAC HCM1.269 201431 - 201916 + | hypothetical protein HCM1.270 201913 - 202635 + | hypothetical protein TERM 218 204246 - 204257 + G 71 -4.4 -4.56597 | AGTCTGGCGCGGATA TCTC AAAC GAGA TTTTTGAAACGCAAG TERM 219 205459 - 205438 - g 72 -2.2 -4.97461 | AAGAAAGAGGAAAAA CCGGTTCA TGGTTT TGACCCAG AACACCTTTTATCTG HCM1.271 202646 - 205681 + | hypothetical protein TERM 220 206047 - 206034 - g 74 -2.3 -5.03409 | GTATAAAAAAAATAA CCGAC CAGT ACCGG ATAGAAAAACCTACT HCM1.272 205783 - 207765 + | hypothetical protein TERM 221 207849 - 207829 - g 75 -6.1 -4.5287 | overlap 207831 TGAAAGTAAGTAAAA GCCGCTC GCTCGTT AAGCGGC GTATGCAATCATTAG HCM1.273 207762 - 208868 + | hypothetical protein TERM 222 209237 - 209248 + G 74 -2.2 -5.08255 | overlap 209230 GCTGGAATCTGATAC TCGG TTGG CTGA TTTTGTTTTCACCAT HCM1.275 208855 - 209517 + | hypothetical protein TERM 223 209521 - 209509 - f 72 -4.9 -4.62471 | TCTAACTTTCAAAAA CTTAT GTA ATAAG GTGGTCAGATGTTTA TERM 224 210277 - 210267 - g 73 -5.4 -4.56597 | opp_overlap 210274 TGTCGGCGTTAAAAA TGAG CCA CTCA CCGCCGGGGAGTTTA HCM1.276 209530 - 210711 + | putative peptidase TERM 225 211366 - 211353 - g 71 -4.5 -4.54047 | opp_overlap 211359 211362 CCACTCGATACAAAA CAACC ATGC GGCTG GAGCAGCGTATTACC HCM1.277 210728 - 211441 + | putative periplasmic protein TERM 226 211463 - 211448 - T 100 -6 -6.02546 | opp_overlap 211441 211448 GCAAAGTAAAAAAAA CCCTGC AAAT GCGGGG TTTTTTATGGATTCA TERM 227 211448 - 211463 + T 100 -8.2 -5.31456 | opp_overlap 211448, overlap 211441 GCAAAGTAAAAAAAA CCCTGC AAAT GCGGGG TTTTTTATGGATTCA HCM1.278c 211824 - 211468 - | hypothetical protein HCM1.279c 212225 - 211911 - | hypothetical protein HCM1.279ac 212776 - 212540 - | hypothetical protein TERM 228 212695 - 212705 + g 76 -3.2 -5.06414 | CTCCGCCCTGGAAAC GGTA AAG TGCC TTTTTATTACGGAGA TERM 229 213139 - 213118 - R 100 -9.5 -5.26316 | gap 1, opp_overlap 213122, overlap 213122 TGAGCCCACAAAAAA GAAACCCGGT GTT ACCGGG-TTC TTGTGCTAATCAACT TERM 230 213122 - 213136 + r 87 -11.4 -3.85864 | opp_overlap 213118 213122 CCCACAAAAAAGAAA CCCGGT GTT ACCGGG TTCTTGTGCTAATCA TERM 231 213136 - 213122 - R 100 -11.4 -5.13354 | opp_overlap 213122, overlap 213118 CCCACAAAAAAGAAA CCCGGT GTT ACCGGG TTCTTGTGCTAATCA HCM1.279bc 213385 - 213149 - | hypothetical protein TERM 232 213424 - 213403 - R 71 -10.1 -3.29461 | GAATTTCCTTCATAA TCGCCAGGC CGGA GCCTGGCTA GGGGTGTCAGGCCGC HCM1.280c 213976 - 213431 - | hypothetical protein HCM1.281c 214494 - 214057 - | hypothetical protein HCM1.282 214547 - 214870 + | hypothetical protein HCM1.284c 215439 - 215158 - | hypothetical protein TERM 233 215490 - 215517 + r 71 -7.6 -3.96497 | opp_overlap 215475 CCCTACCGGGTGGCG GGGTCAGTCAGG AAAT CATGCCTGGCCC TTGTTCTGCTTTTCA HCM1.286c 216710 - 215505 - | putative DNA-binding protein TERM 234 216964 - 216952 - H 80 -5.5 -5.00616 | GGTTGCCTGAAAAAA TGCCG TTG CAGCA AACACAAGGTGTGAA HCM1.288N 217128 - 217394 + | hypothetical protein TERM 235 217496 - 217473 - gT 100 -13.2 -5.4387 | opp_overlap 217473, overlap 217494 217495 ATAGAAAGGAAAAAA GGGTTTCCCC GACC GGAGAAACCC TTTTCTAAAGGTGCC TERM 236 217473 - 217496 + GT 95 -11 -4.38712 | opp_overlap 217473 217494 217495 ATAGAAAGGAAAAAA GGGTTTCCCC GACC GGAGAAACCC TTTTCTAAAGGTGCC HCM1.288 217313 - 217504 + | hypothetical protein TERM 237 217560 - 217539 - T 82 -11.5 -3.59262 | opp_overlap 217540, overlap 217540 217542 GCCCACATTCTGAAA TGAGGGGGG TCGC CCCCCCTCT TTCAGCTACTTACCG TERM 238 217559 - 217540 - T 90 -15 -2.75343 | opp_overlap 217540, overlap 217539 217542 CCCACATTCTGAAAT GAGGGGGG TCGC CCCCCCTC TTTCAGCTACTTACC TERM 239 217540 - 217559 + T 100 -15 -3.63895 | opp_overlap 217540 217539 217542 CCCACATTCTGAAAT GAGGGGGG TCGC CCCCCCTC TTTCAGCTACTTACC TERM 240 217556 - 217542 - T 79 -12.8 -2.92171 | opp_overlap 217540, overlap 217540 217539 CACATTCTGAAATGA GGGGGG TCG CCCCCC CTCTTTCAGCTACTT HCM1.290c 217724 - 217566 - | small toxic polypeptide SEQUENCE gi|18466665|ref|NC_003385.1| Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence (length 106516) HCM2.0002c 334 - 29 - | putative periplasmic protein HCM2.0003c 650 - 375 - | hypothetical protein TERM 1 685 - 712 + r 72 -8.4 -3.66784 | opp_overlap 689, overlap 688 AAGTACTTATTTATA TTAATGTGCGCC ATGC GGCGCACAATCA TTGTGTTCAGGCTGG TERM 2 688 - 709 + r 70 -10.1 -2.94293 | opp_overlap 689, overlap 685 TACTTATTTATATTA ATGTGCGCC ATGC GGCGCACAA TCATTGTGTTCAGGC TERM 3 708 - 689 - R 86 -13.6 -3.28119 | opp_overlap 688 685 ACTTATTTATATTAA TGTGCGCC ATGC GGCGCACA ATCATTGTGTTCAGG HCM2.0004c 1129 - 719 - | hypothetical protein HCM2.0005c 1484 - 1113 - | hypothetical protein TERM 4 1628 - 1611 - R 100 -12.7 -5.65927 | opp_overlap 1611 1610 1608 1606 1626 TACGGAAATAAAAAA GGCGTCC AAGT GGACGCC GTATCTTTGAAAAGG TERM 5 1611 - 1628 + r 78 -12.7 -2.54325 | opp_overlap 1611, overlap 1610 1608 1606 1626 TACGGAAATAAAAAA GGCGTCC AAGT GGACGCC GTATCTTTGAAAAGG HCM2.0006c 2489 - 1647 - | putative lipoprotein HCM2.0007c 2693 - 2493 - | hypothetical protein TERM 6 2762 - 2778 + r 93 -13.7 -3.52539 | opp_overlap 2762, overlap 2752 TTCAAGCATAAAAAA GGCGTCC AAC GGACGCC TTGTGATTACGCTTC TERM 7 2778 - 2762 - R 100 -13.7 -5.37345 | opp_overlap 2762 2752 TTCAAGCATAAAAAA GGCGTCC AAC GGACGCC TTGTGATTACGCTTC HCM2.0008c 3861 - 2785 - | putative recombinase TERM 8 3800 - 3815 + g 79 -3.2 -5.26119 | GAGACCTTCTGAATC TCGTCA TTGC TGCCGA TTTTCTTTTTCAGCG HCM2.0009c 4130 - 3864 - | hypothetical protein HCM2.0010c 5074 - 4130 - | putative exonuclease TERM 9 5118 - 5095 - R 100 -15.4 -4.57073 | opp_overlap 5099 CACTCCTTCCAAAAA GTAAGGCGTC CGTA GACGCCTTAC TGGTCACGTTATGGG TERM 10 5099 - 5114 + r 74 -10.4 -3.22223 | opp_overlap 5095 CCTTCCAAAAAGTAA GGCGTC CGTA GACGCC TTACTGGTCACGTTA HCM2.0011c 6163 - 5135 - | hypothetical protein TERM 11 5403 - 5416 + g 70 -6.7 -4.07568 | CCAAAACCTGGCAGT TCAGC AGCG GCTGA TTTTGCAGCGGAAGA HCM2.0012 6714 - 6283 - | hypothetical protein HCM2.0013 6960 - 7550 + | hypothetical protein TERM 12 7640 - 7615 - T 100 -17.7 -3.61517 | opp_overlap 7604 7615 7618, overlap 7618 AGCTGTTTTCAACAA TAAGGCTCGCC ATCC GGCGAGCCTTA TAATTAAGCGACTTT TERM 13 7615 - 7640 + T 100 -17.7 -2.7186 | opp_overlap 7615 7618, overlap 7604 7618 AGCTGTTTTCAACAA TAAGGCTCGCC ATCC GGCGAGCCTTA TAATTAAGCGACTTT TERM 14 7637 - 7618 - T 100 -15 -3.9461 | opp_overlap 7615 7604 7618, overlap 7615 TGTTTTCAACAATAA GGCTCGCC ATCC GGCGAGCC TTATAATTAAGCGAC TERM 15 7618 - 7637 + T 100 -15 -3.50853 | opp_overlap 7618 7615, overlap 7615 7604 TGTTTTCAACAATAA GGCTCGCC ATCC GGCGAGCC TTATAATTAAGCGAC HCM2.0014c 8087 - 7644 - | hypothetical protein HCM2.0015c 11602 - 8084 - | putative DNA polymerase III alpha subunit TERM 16 11525 - 11540 + g 71 -4.6 -4.67635 | GTAGCCAGCGTCTCT CGCGAT TTTC ACCGCG TTTTCTGCTTTTAGA HCM2.0016c 13018 - 11783 - | putative porphyrin biosynthetic protein HCM2.0017c 15277 - 13115 - | hypothetical protein TERM 17 14979 - 14947 - G 80 -4.8 -5.06414 | gap 1, opp_overlap 14968, overlap 14968 14969 TGCGCTCAATAAAAA CGTCTTCCAGCGCGT TCCA AAGC-CCGGTAGACG GAGCCTTTCCTTTCT HCM2.0018c 15599 - 15387 - | hypothetical protein HCM2.0019 15861 - 16247 + | hypothetical protein HCM2.0020c 17129 - 16239 - | hypothetical protein HCM2.0021 17197 - 17385 + | hypothetical protein TERM 18 17433 - 17484 + F 75 -3.2 -5.1925 | gap 1, opp_overlap 17445, overlap 17448 AACCATAAAATAGCC TGTTTTGTACAATGATTCCATACTT AAT AGGTATGGAATCATTG-AGGTGCCA TTTTTTGAATTCTGA TERM 19 17473 - 17445 - f 79 -11.9 -3.28712 | opp_overlap 17433 17448 GCCTGTTTTGTACAA TGATTCCATACTT AAT AGGTATGGAATCA TTGAGGTGCCATTTT TERM 20 17783 - 17811 + G 73 -5.3 -4.66953 | overlap 17787 CTATATGGTGAAGAG CTTGCAACACTCA CAG TAAGTGTTGTCAG TTTTTACAATGTTGA HCM2.0022 17606 - 18097 + | hypothetical protein TERM 21 18229 - 18259 + T 100 -13.5 -4.40804 | gap 1, opp_overlap 18226 18237, overlap 18233 18237 TTTAATAATCAATTT CATAGAAAGGCTCC ATTA GGAGCCTTTCT-TG TTTTATAGCGTACTC TERM 22 18233 - 18256 + T 100 -15.4 -4.32067 | opp_overlap 18226 18237, overlap 18229 18237 ATAATCAATTTCATA GAAAGGCTCC ATTA GGAGCCTTTC TTGTTTTATAGCGTA TERM 23 18252 - 18237 - T 87 -10.4 -4.06491 | opp_overlap 18237 18233 18229 TCAATTTCATAGAAA GGCTCC ATTA GGAGCC TTTCTTGTTTTATAG TERM 24 18237 - 18252 + T 93 -10.4 -4.72617 | opp_overlap 18237, overlap 18233 18229 TCAATTTCATAGAAA GGCTCC ATTA GGAGCC TTTCTTGTTTTATAG grxA 18507 - 18262 - | glutaredoxin 1 HCM2.0024c 18887 - 18507 - | hypothetical protein HCM2.0025c 19106 - 18903 - | hypothetical protein HCM2.0026c 19949 - 19116 - | hypothetical protein TERM 25 19938 - 19955 + g 74 -7.1 -4.28977 | opp_overlap 19938 TATACCGACAAATAA TAGGTAA GTCA TTACCTA TTTTGCATGTGTTAT TERM 26 19955 - 19938 - G 70 -7.1 -4.10188 | opp_overlap 19938 TATACCGACAAATAA TAGGTAA GTCA TTACCTA TTTTGCATGTGTTAT HCM2.0027c 20557 - 20003 - | hypothetical protein HCM2.0028c 21389 - 20835 - | putative lipoprotein TERM 27 21268 - 21279 + g 74 -2.2 -5.09762 | TGGGTTTTGTACTGG CTCT CAAG GGAG TTTTTGTCTTGGCCT HCM2.0029c 22196 - 21468 - | hypothetical protein TERM 28 22284 - 22299 + r 76 -4.6 -5.07486 | opp_overlap 22279 22284 GACCGCAAAGCAAAA TGGAGC CGAA GCCCCA TTTTTATTAAAACTA TERM 29 22299 - 22284 - R 80 -6.8 -4.55798 | opp_overlap 22284, overlap 22279 GACCGCAAAGCAAAA TGGAGC CGAA GCCCCA TTTTTATTAAAACTA HCM2.0030c 22761 - 22471 - | hypothetical protein TERM 30 22584 - 22565 - G 77 -7.8 -4.35405 | opp_overlap 22565 TAAAAAAACCAGAAA GAACTCCC GTTC GGGGGTTC TTTTTTTTTTGCGTA TERM 31 22565 - 22584 + g 100 -10 -6.38039 | opp_overlap 22565 TAAAAAAACCAGAAA GAACTCCC GTTC GGGGGTTC TTTTTTTTTTGCGTA TERM 32 22770 - 22783 + r 80 -9.5 -3.83756 | opp_overlap 22770, overlap 22773 22774 TTATCAAAGAAAAAA GGGGC CGAA GCCCC TTTGGATTATGGTTT TERM 33 22783 - 22770 - R 100 -9.5 -5.68438 | opp_overlap 22770 22773 22774 TTATCAAAGAAAAAA GGGGC CGAA GCCCC TTTGGATTATGGTTT TERM 34 23758 - 23771 + r 74 -3.9 -4.96848 | opp_overlap 23754 23758 TACATATTAGATAAG TAAGT AAAT ACTTA TTTTTCTGTAACCCG HCM2.0031c 24074 - 23769 - | hypothetical protein HCM2.0032c 24223 - 24071 - | hypothetical protein TERM 35 24111 - 24129 + g 70 -3 -4.69549 | opp_overlap 24111, overlap 24117 ACAACCCGATACAGA CGCTTACC GAT GCGAAGCG TTTTGGTTTTCAGTT TERM 36 24196 - 24176 - G 83 -12.5 -3.17797 | GCGACAGATACTGAA GCCGAGGGC CAC GCCCCCAGC AAAAGATAATAGGAT HCM2.0033c 24429 - 24223 - | hypothetical protein HCM2.0034c 24595 - 24419 - | hypothetical protein HCM2.0035c 25917 - 24595 - | putative DNA ligase TERM 37 25746 - 25758 + g 80 -9.1 -4.14257 | opp_overlap 25739 GTACGGAAGTATCGA GTGGC TCG GCCAC TTTGTACTTCTTCAC TERM 38 25857 - 25871 + g 80 -5.6 -4.85599 | overlap 25843 GCGCCTCTTTCTTGG CGTTGG TTC CCATCG TTTTTATGGCATCCA HCM2.0036c 26209 - 25952 - | hypothetical protein TERM 39 26491 - 26477 - R 91 -8.5 -5.0538 | GCGCAGTTTAAAAAA GCCCC ACCAG GGGGC TAAATGGTTTATCGA HCM2.0038c 27304 - 26510 - | hypothetical protein TERM 40 27366 - 27349 - H 72 -2.8 -4.9725 | ATTCTTACAGAAAAA TAAGTA TGCATC TACTTA TCAATGTAGGCGTTT HCM2.0039 27488 - 28540 + | hypothetical protein HCM2.0040c 29753 - 28542 - | hypothetical protein TERM 41 29730 - 29762 + g 70 -5.1 -4.49353 | opp_overlap 29756, overlap 29756 ATAAAGGCTCATGTG TTTTTTCTTTTGT GGCTTTG GCAAAAGAGAAAA TTTGTTCTCTTATGG TERM 42 29779 - 29810 + r 85 -5.8 -5.40072 | gap 1, overlap 29783 TTGTTCTCTTATGGA GACCGGCGTGGAGAG CGT TTCCCCACGCCT-TC TTTTTTTAGAGGACG TERM 43 29783 - 29807 + r 100 -12.1 -4.79949 | overlap 29779 TCTCTTATGGAGACC GGCGTGGAGAG CGT TTCCCCACGCC TTCTTTTTTTAGAGG HCM2.0041c 31156 - 29816 - | putative DNA helicase TERM 44 30793 - 30828 + g 79 -12.6 -2.88758 | gap 1 CGAACGCTACGCTTT TGGCGAACGTGG-CGAC CTG GTCGACCATGTACGCCG TATCTGACAGCTTCT HCM2.0042c 31942 - 31217 - | hypothetical protein TERM 45 32114 - 32062 - H 70 -10.1 -3.08032 | opp_overlap 32062 32078, overlap 32059 32105 TGGCGTCGAAAATGA CCTGCTTCCGTATAAATAATAAGTA ACT TAGTATTTATATATACAGAAGCAGG TTCTGAGCTACAGCT HCM2.0043 32224 - 33279 + | hypothetical protein TERM 46 33284 - 33335 + T 75 -6.2 -4.55128 | gap 2, opp_overlap 33290, overlap 33286 33286 33290 ATTACGAATAAACGT CAGA--AATGTTACTAAGGCGGTT TGATTT ATCCGCCTTAGTAACATTAATCTA TTTTAATTTCGGACT TERM 47 33286 - 33333 + T 77 -8.8 -3.88396 | gap 2, opp_overlap 33290, overlap 33286 33284 33290 TACGAATAAACGTCA GA--AATGTTACTAAGGCGGTT TGATTT ATCCGCCTTAGTAACATTAATC TATTTTAATTTCGGA TERM 48 33286 - 33331 + T 79 -10.6 -3.51998 | opp_overlap 33290, overlap 33284 33286 33290 TACGAATAAACGTCA GAAATGTTACTAAGGCGGTT TGATTT ATCCGCCTTAGTAACATTAA TCTATTTTAATTTCG TERM 49 33327 - 33290 - T 100 -15.8 -3.96893 | opp_overlap 33290 33286 33286 33284 AATAAACGTCAGAAA TGTTACTAAGGCGGTT TGATTT ATCCGCCTTAGTAACA TTAATCTATTTTAAT TERM 50 33290 - 33327 + T 100 -15.8 -3.46906 | opp_overlap 33290, overlap 33286 33286 33284 AATAAACGTCAGAAA TGTTACTAAGGCGGTT TGATTT ATCCGCCTTAGTAACA TTAATCTATTTTAAT HCM2.0044c 34104 - 33349 - | hypothetical protein TERM 51 33556 - 33570 + g 70 -2.8 -4.72272 | opp_overlap 33545, overlap 33552 ACCATAACCATCAGT GATTAC TCT GTATTC TTTTTCGTAAGACCA TERM 52 34144 - 34129 - R 82 -7.5 -4.63218 | TCGCTCGTAATAAAA GGCGC ATTTCA GCGCC TAATAAGTTTAACCT HCM2.0045c 34512 - 34153 - | hypothetical protein HCM2.0046c 35177 - 34512 - | hypothetical protein HCM2.0047 35508 - 36059 + | hypothetical protein TERM 53 36055 - 36103 + T 100 -16.8 -3.42346 | opp_overlap 36062 36066 ATGACGATGTAGATG GTTAATACGAAGGCGCTCCATC TTATC GGTGGAGCGCCTTCGTACGGGC TTGTAATCAGGTATT TERM 54 36096 - 36062 - T 100 -20.1 -3.05343 | opp_overlap 36055, overlap 36066 TGTAGATGGTTAATA CGAAGGCGCTCCATC TTATC GGTGGAGCGCCTTCG TACGGGCTTGTAATC TERM 55 36092 - 36066 - T 90 -13.7 -3.36749 | opp_overlap 36055, overlap 36062 GATGGTTAATACGAA GGCGCTCCATC TTATC GGTGGAGCGCC TTCGTACGGGCTTGT HCM2.0048c 36454 - 36110 - | hypothetical protein HCM2.0049c 37215 - 36523 - | hypothetical protein HCM2.0050c 37552 - 37229 - | hypothetical protein TERM 56 37661 - 37638 - R 83 -13.2 -3.18912 | TCACTTACTTATTAA TTGGCGCGAA AACA TCCGCGCCAA TAACCCTATTCACCT HCM2.0051c 40219 - 37667 - | putative phage tail protein TERM 57 39626 - 39653 + g 77 -7.7 -4.29845 | gap 1, overlap 39621 ACTTTCACTGGTAGC CGCTGCCTGCTG AGAGG CAGCTG-CAGCG TTTTCACTTGCCTTA TERM 58 39772 - 39802 + g 71 -8.4 -3.77325 | opp_overlap 39775, overlap 39775 TTGAGGACTCCGACT CAATGGTATCGA CGTGATC TCGATACCACTG TTGGTTTTCGTTGTG HCM2.0052c 44690 - 40302 - | putative phage tail protein HCM2.0053c 45292 - 44705 - | putative phage tail protein HCM2.0054c 46077 - 45280 - | hypothetical protein TERM 59 45504 - 45468 - G 74 -4.3 -4.79174 | gap 1, opp_overlap 45471 ACTGAATGAAGAAAA CGTCACCACGCTGGGG TTCCGT CCCCGGCGCCA-GACG AACAAGCCCTTCATT HCM2.0055c 46801 - 46070 - | putative phage tail protein HCM2.0056c 47193 - 46858 - | hypothetical protein HCM2.0057c 51818 - 47235 - | hypothetical protein TERM 60 48640 - 48665 + g 83 -10.5 -3.94409 | gap 1, overlap 48639 48636 TCGTCGCTCGCGTTC GCCAGGTCA-GC CAG GCGTGACTTGGC TTTGTCGATCATCTC TERM 61 48837 - 48855 + g 70 -3.1 -4.80178 | gap 1, overlap 48825 TTTCTGGTAGCCGGC CGC-CAGT TTAC GCTGCGCG TTTTCTTCCTTCCTC TERM 62 50285 - 50295 + g 78 -6.8 -4.56597 | opp_overlap 50285 50286 TGCCCAAGCTGATAA CCAG TTC CTGG TTTTTAGCCAGCCAC HCM2.0058c 52095 - 51826 - | hypothetical protein HCM2.0059c 52493 - 52176 - | hypothetical protein TERM 63 52536 - 52514 - R 73 -7.7 -4.0896 | opp_overlap 52514 52516 52526, overlap 52503 52516 AAAGTCCTTTTAAAA GAGAGGCTC TTCCT GAGCCTCTG CTTAGTTACGTCGCG TERM 64 52534 - 52516 - R 79 -10.3 -3.63922 | opp_overlap 52516 52514 52526, overlap 52514 AGTCCTTTTAAAAGA GAGGCTC TTCCT GAGCCTC TGCTTAGTTACGTCG TERM 65 52516 - 52534 + r 72 -10.3 -2.8507 | opp_overlap 52514 52516, overlap 52514 52526 AGTCCTTTTAAAAGA GAGGCTC TTCCT GAGCCTC TGCTTAGTTACGTCG HCM2.0060c 53299 - 52553 - | hypothetical protein TERM 66 52761 - 52800 + g 86 -10.8 -4.14013 | gap 1, opp_overlap 52798, overlap 52750 52797 52798 AGCTGCACGGTCTCA CCGGCTTTAACT-TCCGGA GAT TCCGGAGAGCTAGAGACGG TTTTAACCGGTTTTG TERM 67 53350 - 53365 + r 75 -6.2 -4.48997 | overlap 53351 TTCACGGTGTCAATG GTAAGT ATAT ACTTAC TTATTTTATTAATTC HCM2.0061c 53757 - 53374 - | hypothetical protein HCM2.0062c 54232 - 53759 - | hypothetical protein HCM2.0063c 54567 - 54223 - | hypothetical protein HCM2.0064c 55498 - 54665 - | hypothetical protein HCM2.0065c 55932 - 55498 - | hypothetical protein TERM 68 55946 - 55971 + r 77 -10.5 -3.33696 | gap 1, opp_overlap 55949, overlap 55947 55949 ATTCTTCTTCTCACT TA-ATGGGCGGC ATA GCCGCCCATGTG TTGGTTACGCAGCCG TERM 69 55947 - 55969 + r 83 -13.4 -3.23853 | opp_overlap 55949, overlap 55946 55949 TTCTTCTTCTCACTT AATGGGCGGC ATA GCCGCCCATG TGTTGGTTACGCAGC TERM 70 55949 - 55967 + r 100 -16 -3.18366 | opp_overlap 55949, overlap 55947 55946 CTTCTTCTCACTTAA TGGGCGGC ATA GCCGCCCA TGTGTTGGTTACGCA TERM 71 55967 - 55949 - R 93 -16 -3.05384 | opp_overlap 55947 55946 55949 CTTCTTCTCACTTAA TGGGCGGC ATA GCCGCCCA TGTGTTGGTTACGCA HCM2.0066c 56899 - 55976 - | hypothetical protein TERM 72 56173 - 56187 + g 70 -2.8 -4.72029 | CCGGTTCGATGTTCG CGGT CAGTTGT ACCG TTTTGTTGGCTTCAA TERM 73 56938 - 56918 - R 100 -14 -4.82901 | TCGCTCCTACAAAAA GGGTGGGC GTATA GCCCACCC TTAAACGGTAGATAA HCM2.0067c 57849 - 56974 - | hypothetical protein HCM2.0068c 58772 - 57876 - | hypothetical protein HCM2.0069c 60369 - 58795 - | hypothetical protein HCM2.0070c 61659 - 60403 - | hypothetical protein TERM 74 61369 - 61396 + g 74 -2.6 -5.06414 | overlap 61372 GATTTCAGAGCCGTT CTTCAGCACGAT GGTC ATCGTGGTGTCG TTTTTCTTACGAACC HCM2.0071c 62303 - 61662 - | putative DNA-binding protein TERM 75 62270 - 62288 + g 75 -3.8 -4.86001 | ACTCAGCTGGTGTCA GGCGAG TTTTGCT CTCGTC TTTTTCTACAGTCAT TERM 76 62474 - 62418 - R 86 -14.2 -3.17051 | gap 2, opp_overlap 62437 62440, overlap 62416 TGGGGAGTATTAAGA GCCTGCTTCCGTATATAT--TTAATAAG TCA CTTAGTATTTATATATACGGAAGCAGGC TCTCAAACTGGCTCC HCM2.0072c 62765 - 62499 - | hypothetical protein HCM2.0073c 63674 - 62775 - | hypothetical protein HCM2.0074c 63925 - 63671 - | hypothetical protein TERM 77 63801 - 63813 + g 84 -9.1 -4.34267 | opp_overlap 63777, overlap 63799 63797 TTGATCATCAGCAGC GCCAG GCT CTGGC TTTTGCCTTCTCTGG HCM2.0075c 64556 - 63918 - | putative ABC transporter ATP-binding protein TERM 78 64236 - 64255 + g 83 -10 -4.08945 | gap 1, opp_overlap 64232 64235 64230, overlap 64238 GGCCATAGACAGCAG CC-CCAGCG CTT CGCTGGTGG TTTTGCCCAGCTGGT TERM 79 64238 - 64252 + g 72 -11.4 -3.08211 | opp_overlap 64232 64235 64230, overlap 64236 CCATAGACAGCAGCC CCAGCG CTT CGCTGG TGGTTTTGCCCAGCT HCM2.0076c 65221 - 64553 - | hypothetical protein TERM 80 65111 - 65149 + g 76 -3 -5.10029 | overlap 65113 65123 AAAACCGCGCTTTTT GATGGCGGCCGCCAGGTC GCG GATCTGCTGTTCGTCATG TTTTTTGGCGTTCAT HCM2.0077c 65919 - 65221 - | hypothetical protein TERM 81 66232 - 66218 - g 77 -4.2 -4.8622 | opp_overlap 66222 GTGCGCAAGGAAAAA GCCC CCGCGCT GGGC AGGCCGAACCCGGTA HCM2.0078 65984 - 67543 + | putative helicase HCM2.0079 67546 - 67824 + | hypothetical protein TERM 82 67833 - 67848 + F 83 -10.4 -3.8186 | opp_overlap 67832 67833 CGATTAAGCATTAAG GGCGTC GCAA GACGCC TTGTTCGTTGAAGTG TERM 83 67848 - 67833 - f 70 -10.4 -2.57136 | opp_overlap 67833, overlap 67832 CGATTAAGCATTAAG GGCGTC GCAA GACGCC TTGTTCGTTGAAGTG HCM2.0080 67884 - 68306 + | putative lipoprotein HCM2.0081 68311 - 68838 + | putative transcriptional regulator HCM2.0082 68842 - 69150 + | putative periplasmic protein TERM 84 69162 - 69187 + F 90 -10.6 -4.24606 | opp_overlap 69168 ATAAATCTATAAGGG TAATAACCGG CTAAGT CCGGTTATTA TTTTACGTGTCACTT HCM2.0083 69473 - 70123 + | hypothetical protein TERM 85 70161 - 70128 - f 100 -16.3 -3.3907 | gap 1, opp_overlap 70137 TCAAAGCGTAATTAA TTGAATATAGCGCCCA TAG TGGGCGCT-TATTCAA AAGATCTTAAGTCTG TERM 86 70137 - 70153 + F 93 -13.7 -3.62224 | opp_overlap 70128 AATTAATTGAATATA GCGCCCA TAG TGGGCGC TTATTCAAAAGATCT HCM2.0084 70208 - 70435 + | hypothetical protein TERM 87 70465 - 70439 - T 100 -9.4 -5.69262 | opp_overlap 70444, overlap 70442 70444 TTAGAAAAATAAAAA CAATAGCGCCCA CTA TGGGCGCTTTTT TCGTTTCAAGATCCG TERM 88 70462 - 70442 - T 100 -11.1 -4.855 | opp_overlap 70444, overlap 70439 70444 GAAAAATAAAAACAA TAGCGCCCA CTA TGGGCGCTT TTTTCGTTTCAAGAT TERM 89 70460 - 70444 - T 100 -13.7 -3.97385 | opp_overlap 70444, overlap 70442 70439 AAAATAAAAACAATA GCGCCCA CTA TGGGCGC TTTTTTCGTTTCAAG TERM 90 70444 - 70460 + T 100 -13.7 -5.37593 | opp_overlap 70444 70442 70439 AAAATAAAAACAATA GCGCCCA CTA TGGGCGC TTTTTTCGTTTCAAG TERM 91 70508 - 70491 - T 85 -12.7 -3.4678 | opp_overlap 70491 ATCCGCACACCATAA CGCGCCA TAGT TGGCGCG TTTTTCATTGTCTGA TERM 92 70491 - 70508 + T 100 -12.7 -4.96646 | opp_overlap 70491 ATCCGCACACCATAA CGCGCCA TAGT TGGCGCG TTTTTCATTGTCTGA TERM 93 70560 - 70576 + T 70 -2.2 -5.05601 | opp_overlap 70550 70560 AATAAGCGCCATAAA CGCG CCAATTTAA CGCG TTTTTATGTGTGGTG TERM 94 71063 - 71039 - T 74 -7.1 -4.25104 | opp_overlap 71039, overlap 71043 GCTGGTGGACGAAAA GAAAGGGGC GTTTCCA GCCCCTCCC CTCTTACTTGCCAGT TERM 95 71059 - 71043 - T 78 -6.5 -4.72007 | opp_overlap 71039, overlap 71039 GTGGACGAAAAGAAA GGGGC GTTTCCA GCCCC TCCCCTCTTACTTGC HCM2.0085c 71549 - 71067 - | hypothetical protein TERM 96 71727 - 71746 + r 73 -10.7 -2.95751 | opp_overlap 71727, overlap 71724 AGGATGGTCATTTAA GGCCACC AGCATG GGTGGCC TCGTTCTCTTAGTGG TERM 97 71746 - 71727 - R 73 -10.7 -3.06302 | opp_overlap 71727 71724 AGGATGGTCATTTAA GGCCACC AGCATG GGTGGCC TCGTTCTCTTAGTGG HCM2.0086c 72042 - 71755 - | hypothetical protein TERM 98 72136 - 72110 - R 81 -8.2 -4.49337 | overlap 72135 GGATAAGGCATAAAA CATTTTGTTATC GGG GATAAGAAAATG GCGCGGGATACGCGC TERM 99 72153 - 72135 - R 100 -11.7 -4.77165 | overlap 72110 TCGGGGATAAGAAAA TGGCGCG GGATA CGCGCCA TTGCAGTGATTAAGC HCM2.0087c 72555 - 72163 - | hypothetical protein TERM 100 72650 - 72630 - R 93 -6.8 -5.72053 | opp_overlap 72630 CAAGCAAACAAAAAA GCCCCG AAGGATGGA CGGGGC TGTCGTAGGGTCGAC HCM2.0088c 72995 - 72684 - | hypothetical protein HCM2.0089c 73386 - 73072 - | hypothetical protein HCM2.0090c 73699 - 73481 - | hypothetical protein HCM2.0091c 73925 - 73710 - | hypothetical protein HCM2.0092 74068 - 74313 + | hypothetical protein TERM 101 75417 - 75440 + T 75 -3 -5.20216 | overlap 75423 CCCAATATAACGCAA CGGGAGCGCT TCTG AGCGTGTCTG TTTTTTGGTGGTATC HCM2.0093c 76940 - 75750 - | hypothetical protein TERM 102 76407 - 76390 - G 74 -4.8 -4.7373 | overlap 76391 CGAGGCCATGAAAAA CCAGGC ACAGTA GCCTGA ATAGGTGAGAAAGGC HCM2.0094c 77267 - 76950 - | hypothetical protein HCM2.0095c 77633 - 77352 - | hypothetical protein HCM2.0096 77807 - 78010 + | hypothetical protein TERM 103 78040 - 78056 + T 100 -9.4 -4.99134 | AAACAAATTGTTTAA GGCCAC AACTA GTGGCC TTTTTGATTTCGGCT HCM2.0097c 78358 - 78071 - | hypothetical protein HCM2.0098c 78666 - 78355 - | hypothetical protein HCM2.0099c 79217 - 78675 - | hypothetical protein HCM2.0100c 79855 - 79214 - | hypothetical protein TERM 104 79949 - 79918 - R 73 -4.4 -4.79683 | opp_overlap 79922 79926, overlap 79926 AAGGTAGAAAACAAA TTGTTAAAGGCCAC AATA GTGGCCTTTATTTA CTCAGCGATAAGCGA TERM 105 79922 - 79945 + r 100 -14 -3.73224 | opp_overlap 79918 79926, overlap 79926 TAGAAAACAAATTGT TAAAGGCCAC AATA GTGGCCTTTA TTTACTCAGCGATAA TERM 106 79926 - 79941 + r 93 -10.4 -4.49556 | opp_overlap 79918 79926, overlap 79922 AAACAAATTGTTAAA GGCCAC AATA GTGGCC TTTATTTACTCAGCG TERM 107 79941 - 79926 - R 83 -10.4 -3.671 | opp_overlap 79926 79922, overlap 79918 AAACAAATTGTTAAA GGCCAC AATA GTGGCC TTTATTTACTCAGCG HCM2.0101c 80318 - 79947 - | hypothetical protein HCM2.0102c 80602 - 80429 - | hypothetical protein TERM 108 80619 - 80571 - G 75 -5.8 -4.67982 | opp_overlap 80571 GGGGACTTAACAAAA GCGGAGACGCGCTCGACAGGCA GATCA TTCATGCCGCGCACCTCTCTGC TTTATCCTGCAATTC HCM2.0103c 81288 - 80599 - | hypothetical protein TERM 109 81329 - 81346 + r 74 -7.1 -4.2018 | opp_overlap 81329 81328 81331, overlap 81318 CATTCTTACATAAAT TAGGTAA GTAT TTACCTA TTATTTTACACGTTT HCM2.0104c 83050 - 81347 - | putative DNA modification methylase TERM 110 83156 - 83141 - R 100 -11.8 -5.055 | TTAAGGCGTAAAAAA GGGGGC TTTC GCCCCC TGTCGGCAGGTGAGA HCM2.0105c 83746 - 83174 - | hypothetical protein HCM2.0106c 84697 - 83855 - | hypothetical protein HCM2.0107c 84994 - 84806 - | hypothetical protein TERM 111 84956 - 84946 - G 86 -6.8 -4.99861 | CACCAAGCAGAAAAA TGGC GAG GCCA ACAATCATCGCGGTG TERM 112 85550 - 85526 - R 73 -11.3 -2.71422 | opp_overlap 85527 85528 85546, overlap 85525 85523 CAGTGTCAGAAAGAG TTGCGGCTGGC CAA GCCAGCCGCCT TTTGGCGTTCCATCC TERM 113 85527 - 85549 + r 100 -14.8 -4.19953 | opp_overlap 85525 85526 85523, overlap 85528 85546 AGTGTCAGAAAGAGT TGCGGCTGGC CAA GCCAGCCGCC TTTTGGCGTTCCATC TERM 114 85528 - 85548 + r 100 -18.3 -3.1149 | opp_overlap 85525 85526 85523, overlap 85527 85546 GTGTCAGAAAGAGTT GCGGCTGGC CAA GCCAGCCGC CTTTTGGCGTTCCAT TERM 115 85627 - 85650 + r 76 -7.6 -4.37092 | opp_overlap 85627 ATACCTGATTTAAAA TGATAGGTAA ACAC TTACTTATCA TTTTGTGACAAAAAT HCM2.0109c 86249 - 85641 - | putative ribonuclease H TERM 116 86263 - 86278 + r 89 -5.4 -5.75342 | gap 1, opp_overlap 86263, overlap 86262 ATTTTGGCTCCAGAA TCG-CGC GCC GCGACGA TTTTTTTTCCCGCGC TERM 117 86368 - 86350 - R 77 -10.4 -3.30243 | ACTTACTTCCCAGAA CAGGTTTT AAT AAAACCTG AACTGAACGAACGAA HCM2.111c 87065 - 86835 - | hypothetical protein TERM 118 87241 - 87183 - R 100 -22.3 -4.58663 | opp_overlap 87184, overlap 87184 ATCACGTCTTAAAAA GCCTGCTTCCGTATATATAAATAATTA GTACT TAGTTATTTATATATACGGAAGCAGGT TCTCAAACTAACTCC TERM 119 87240 - 87184 - R 100 -25.8 -3.34716 | opp_overlap 87184, overlap 87183 TCACGTCTTAAAAAG CCTGCTTCCGTATATATAAATAATTA GTACT TAGTTATTTATATATACGGAAGCAGG TTCTCAAACTAACTC TERM 120 87184 - 87240 + r 100 -28.7 -3.31461 | opp_overlap 87183 87184 TCACGTCTTAAAAAG CCTGCTTCCGTATATATAAATAATTAG TAC TTAGTTATTTATATATACGGAAGCAGG TTCTCAAACTAACTC HCM2.0112c 87861 - 87268 - | hypothetical protein TERM 121 87811 - 87835 + g 78 -2.1 -5.25735 | gap 1, overlap 87816 TGTGCGCCAAAGGTC GCGAAGAGAG GCATCA CGCTCT-CGC TTTTTGATTTTTTCG TERM 122 87875 - 87892 + r 83 -4.2 -5.40004 | overlap 87873 ATTACTTTGCCCTGA TAGGTA AATACC TACCTA TTTTTTCATTTAATC HCM2.0113c 88973 - 88047 - | hypothetical protein TERM 123 89012 - 89025 + r 75 -9.5 -3.60475 | opp_overlap 89012 GAAGGCAAAGAAAAA GCGCC ATCA GGCGC TTTCGAATGGGAGTT TERM 124 89025 - 89012 - R 100 -9.5 -5.33026 | opp_overlap 89012 GAAGGCAAAGAAAAA GCGCC ATCA GGCGC TTTCGAATGGGAGTT HCM2.0114c 89575 - 89018 - | hypothetical protein HCM2.0115c 90004 - 89585 - | hypothetical protein HCM2.0116c 90712 - 90068 - | hypothetical protein HCM2.0117c 91188 - 90712 - | putative dihydrofolate reductase HCM2.0118c 91598 - 91185 - | hypothetical protein HCM2.0119c 92715 - 91600 - | putative thymidylate synthase TERM 125 92817 - 92798 - R 100 -9.3 -5.52986 | AGGGGAGTAAAAAAA TGGTGGC TCTTAG GCCACCA TTGCAATGAGCAATT HCM2.0120c 93760 - 92831 - | hypothetical protein nrdB 94985 - 93843 - | ribonucleotide-diphosphate reductase subunit beta TERM 126 95088 - 95069 - R 79 -7.8 -4.45664 | opp_overlap 95062, overlap 95070 TCAACTCAATGAAAA GGTGGGGA TTTC TCCCCACG CTCATCAGATTTTGC TERM 127 95087 - 95070 - R 77 -11.3 -3.26675 | opp_overlap 95062, overlap 95069 CAACTCAATGAAAAG GTGGGGA TTTC TCCCCAC GCTCATCAGATTTTG HCM2.0122c 97408 - 95093 - | ribonucleotide-diphosphate reductase subunit alpha TERM 128 97138 - 97116 - G 80 -10.6 -3.89524 | opp_overlap 97131 97133 ATGTGATTGTAGAAA TTCGGGTAGT CAT ACTGCCCGAA GGCGTCCTTGCGGAT TERM 129 97340 - 97354 + g 70 -2.8 -4.8048 | opp_overlap 97342, overlap 97342 TTCGACTCCCCACAT CACAAC GCG GTTGTA TTTTTCCTCTGACAA TERM 130 97446 - 97427 - R 100 -12.2 -5.4833 | opp_overlap 97424 97422 97427 TCACCCAATAAAAAA GGCCACTA AATA TAGTGGCC TCATGTTAATAGATA TERM 131 97427 - 97446 + r 79 -12.2 -2.77999 | opp_overlap 97427, overlap 97424 97422 TCACCCAATAAAAAA GGCCACTA AATA TAGTGGCC TCATGTTAATAGATA HCM2.0123c 98055 - 97486 - | hypothetical protein HCM2.0124c 98814 - 98068 - | hypothetical protein TERM 132 98682 - 98692 + g 70 -3.2 -4.77757 | ATATCGAGAACTGGT CGTC ATT GATG TTTTCGTTTTTCCAC HCM2.0125c 100720 - 98804 - | hypothetical protein HCM2.0126c 100953 - 100717 - | hypothetical protein HCM2.0127c 102035 - 100950 - | hypothetical protein HCM2.0128 102462 - 102767 + | hypothetical protein TERM 133 102778 - 102795 + T 100 -9.1 -5.00138 | opp_overlap 102778 ATTAATTCTTCAGAA GCACCTC ATAT GGGGTGC TTTTTACTTTGGATC HCM2.0129c 103293 - 102799 - | hypothetical protein HCM2.0130c 104013 - 103369 - | hypothetical protein TERM 134 104296 - 104275 - H 75 -6.5 -4.44797 | opp_overlap 104290 CTATGAAGAGCAAAA CAACCTCTC TGGA GAGTGGTCG GTATCCACTGTAGTG TERM 135 104673 - 104661 - H 72 -2.6 -4.96762 | opp_overlap 104670, overlap 104669 TAGAGAGTAGAAAAA CCAC TATAG GCGG TAGGATAACCGCTGT repA 104758 - 105813 + | putative replication protein A