TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.464418 %AT, 4156684 nt, 39701 terms. Intergenic: 0.546623 %AT, H2T: 567138 nt, 5147 terms; T2T: 131300 nt, 3021 terms; H2H: 218299 nt, 3276 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|16763390|ref|NC_003197.1| Salmonella typhimurium LT2, complete genome (length 4857432) thrL 190 - 255 + | thr operon leader peptide TERM 1 302 - 280 - f 100 -12.7 -5.51046 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCACC TGAAC AGTGCGGGC TTTTTTTTCGACCAG TERM 2 280 - 302 + F 100 -12 -5.75342 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCAC CTGAACA GTGCGGGC TTTTTTTTCGACCAG TERM 3 1328 - 1351 + G 71 -11 -2.87132 | AAGGGATGATTGGGA TGGCGGCG CGTGTTTT CGCCGCCA TGTCTCGCGCCGGGA TERM 4 1626 - 1646 + G 80 -9.7 -3.94344 | overlap 1621 CAATATCGTGGCGAT CGCTCAGGG ATC TTCTGAGCG TTCTATTTCTGTGGT thrA 337 - 2799 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 2801 - 3730 + | homoserine kinase thrC 3734 - 5020 + | threonine synthase TERM 5 5060 - 5021 - T 72 -9.3 -3.62775 | opp_overlap 5019 5012 5024 ATGACCCGCCAATAA CCATTGCGCCCGGT-GGCG CTGT CGCTTACCGGGC-CTATGG GGTGGTGTCGATTTG yaaA 5887 - 5114 - | hypothetical protein TERM 6 5252 - 5238 - G 72 -2.1 -4.89477 | gap 1 TTTTCAATAATAAAA CGG-CT CATC AGTCCG CGCGCTTTTTTGGCG yaaJ 7396 - 5966 - | putative alanine/glycine transport protein talB 7665 - 8618 + | transaldolase B mogA 8729 - 9319 + | molybdenum cofactor biosynthesis protein yaaH 9942 - 9376 - | hypothetical protein TERM 7 9868 - 9854 - G 82 -5.6 -5.03314 | TCCAGGGCGAAAAAA CCGGCA TTG TGCAGG TTAAGCAGAATGGTG TERM 8 10080 - 10057 - R 72 -8.2 -3.69395 | overlap 10066 10074 TCTATGATCTAATAA GGGGGAAA AGAAAATA TTTCCCCC AGTGAGGGCATTCAC htgA 10805 - 10092 - | hypothetical protein yaaI 11245 - 10841 - | hypothetical protein TERM 9 11898 - 11870 - g 70 -5.2 -4.37886 | gap 1, opp_overlap 11869 11870 11873, overlap 11871 11874 TCATGCCGTACAAAA TCAT-CGGCGCCG ACAA CGGCGACGCATGG CTTGATGTGAAAGGT dnaK 11593 - 13509 + | molecular chaperone DnaK TERM 10 13531 - 13507 - f 83 -2.1 -5.63645 | opp_overlap 13513 13530, overlap 13511 GTAAAAGATAAAAAA TAATCGCCCTT TGA ACGGGTAATTA CTGGCACGGGCGAAG TERM 11 13530 - 13572 + F 80 -12.6 -3.01924 | opp_overlap 13507 13532, overlap 13538 CTTTGAACGGGTAAT TACTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATGCA TGTTAAGGGCAGATA TERM 12 13570 - 13532 - f 90 -15.2 -2.73542 | opp_overlap 13530 13538 TTGAACGGGTAATTA CTGGCACGGGCGAAGAGG TTT CCTCTCCGCCCGTGTATG CATGTTAAGGGCAGA TERM 13 13538 - 13564 + F 100 -18 -2.9518 | opp_overlap 13532, overlap 13530 GGGTAATTACTGGCA CGGGCGAAGAGG TTT CCTCTCCGCCCG TGTATGCATGTTAAG TERM 14 13676 - 13663 - g 82 -5.2 -4.98531 | GCGTGAAATCAAAAA GGCG TATAAG CGCC TGGCCATGAAATATC dnaJ 13595 - 14734 + | chaperone protein DnaJ TERM 15 14760 - 14779 + F 100 -11.4 -5.29782 | TTGTATTTTTCTTCA GCCCGGGT GTAT ATCCGGGC TTTTTTCTGCCTGTA STM0014 15014 - 15961 + | putative transcriptional regulator STM0015 16088 - 16432 + | putative bacteriophage protein TERM 16 16451 - 16466 + T 79 -9 -4.16146 | TCATTTGCAGTATCA GGCTCA TCCG TGAGCC TTTTACGCGTCTTTT STM0016 17026 - 16493 - | hypothetical protein STM0017 17486 - 17043 - | hypothetical protein TERM 17 17738 - 17749 + H 72 -3 -5.02502 | ACGGTGTTGTTAACC TCAT TTTT ATGA TTTTTATATCATCTA TERM 18 17756 - 17775 + H 74 -5.8 -4.55491 | overlap 17758 TTTTTATGATTTTTA TATCATCT AAAA AGATGATG TTTTGTGATTAGCTA STM0018 17867 - 19966 + | putative exochitinase TERM 19 20007 - 20024 + F 100 -14.1 -4.36914 | opp_overlap 20007 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG TERM 20 20024 - 20007 - f 85 -14.1 -3.09516 | opp_overlap 20007 GGCTTCATGATTCAA GCCCCGG TTTA CCGGGGC TTTTCTCCACCAGGG TERM 21 22842 - 22859 + G 75 -6.3 -4.66163 | gap 1 AGCGCGACTTACGGC GTC-CCGA CCG TCGGCGAC TTTTTACGTAAAGAT STM0019 20058 - 23054 + | putative hydroxymethyltransferase TERM 22 23093 - 23122 + F 95 -11.6 -4.25104 | CTGGACTATTAGTTT GAGATTCGAAGG CGCGTT CTTTCGAATCTC TTTTCCTGCGCCCCC STM0020 23335 - 24039 + | putative cytoplasmic protein TERM 23 24211 - 24199 - f 70 -4.8 -4.44211 | GTTAATATAAAACAA CAGG TTATG CCTG GTCCTATAAAACCAA bcfA 24469 - 25011 + | fimbrial subunit TERM 24 25006 - 25024 + F 89 -5.3 -5.69473 | overlap 25020 TTTAGCATGGTTTAT TCCTGAT TCCTT ATCGGGA TTTTTTTCTCGTCTG TERM 25 25088 - 25055 - f 77 -8.8 -3.89346 | TTGGGAGGCGAGAAA GGGGCGTTACGCGC GTCACT GCGCGTAACAAACC GACGGCATCAGGATA TERM 26 25563 - 25546 - g 78 -6.9 -4.57073 | overlap 25547 TATCCGCCCGAAAAA TCTGGCG GAGG CGCCAGC TCATGCCCCGTCGAC TERM 27 25562 - 25547 - g 73 -10.4 -3.33922 | overlap 25546 ATCCGCCCGAAAAAT CTGGCG GAGG CGCCAG CTCATGCCCCGTCGA bcfB 25112 - 25798 + | fimbrial chaparone TERM 28 27559 - 27543 - g 87 -8 -4.60292 | TACAACAATAACAAA TCCGCA GGCGA TGCGGA GCGCGATCAAATTTT bcfC 25803 - 28424 + | fimbrial usher TERM 29 29382 - 29368 - g 77 -11.4 -3.51032 | ACCCGGTAAGTACAA CAGGCG AAA CGCCTG CGGAAGGGGCATTTA bcfD 28425 - 29432 + | fimbrial subunit bcfE 29433 - 29978 + | fimbrial subunit bcfF 29994 - 30512 + | fimbrial subunit TERM 30 30733 - 30711 - gf 100 -10.6 -4.90266 | opp_overlap 30715, overlap 30723 GCCAGGAACCAAAAA CGAAGGGAAT ATC ATGCCCTTCG TGGTCACGCCGCCAT bcfG 30478 - 31209 + | fimbrial chaparone TERM 31 31224 - 31243 + F 82 -11.4 -3.58533 | ACCTATTTTTCAGGC GTCTCCCG ATAG CGGGAGGC TTTCCGAACTTATCG TERM 32 31688 - 31699 + G 83 -7.2 -4.64861 | CTGATTAAGGCGAAC CCGG ATAC CCGG TTTATTTTCAAAGAG bcfH 31274 - 32119 + | putative thiol-disulfide isomerase STM0028.1n 32116 - 32445 + | hypothetical protein STM0029 32994 - 32545 - | putative transcriptional regulator TERM 33 33630 - 33620 - g 70 -6.8 -4.09108 | overlap 33621 TTGAATCTATAGAAA GCAC ACT GTGC GATAAAACAGATGCT TERM 34 34287 - 34270 - g 79 -2.7 -5.16472 | AAAAATGTCAAAAAA CTGATAT CAAC ATTTCAG TCGACCTTTCTTTTT STM0030 33364 - 34368 + | putative transcriptional regulator STM0031 34816 - 34376 - | putative transcriptional regulator TERM 35 34560 - 34547 - G 90 -4.5 -5.41143 | overlap 34548 34549 CACCGTGGAAAAAAA CTGGC TCAG GCCAA AGCCTTTAAGGTCGC TERM 36 34946 - 34962 + H 81 -3.8 -5.3104 | opp_overlap 34941 34957, overlap 34957 ACAAAAATGATGGTT TTTTAG AAAAA CTAAAA TTTTATTTTTAGTCG TERM 37 34997 - 34957 - H 82 -7.2 -4.82901 | opp_overlap 34946 34957, overlap 34941 34963 GGTTTTTTAGAAAAA CTAAAATTTTATTTTTAG TCGCT CTAAAAATAAAATGATAG TAGTGTTAATTTTTA TERM 38 34991 - 34963 - H 93 -9.2 -4.82678 | opp_overlap 34957, overlap 34957 TTAGAAAAACTAAAA TTTTATTTTTAG TCGCT CTAAAAATAAAA TGATAGTAGTGTTAA STM0032 35339 - 37057 + | putative arylsulfatase TERM 39 37098 - 37062 - T 77 -10.2 -3.44146 | opp_overlap 37046 37057 37055 37065, overlap 37065 TGTTTGCATAACTAA GTATGTTATGCGGCCG GTTAT CGACCGCATAACATTA TGGCTTATTTGCTAA TERM 40 37095 - 37065 - T 93 -16.3 -2.87274 | opp_overlap 37046 37057 37055 37065, overlap 37062 TTGCATAACTAAGTA TGTTATGCGGCCG GTTAT CGACCGCATAACA TTATGGCTTATTTGC TERM 41 37065 - 37095 + T 95 -14.8 -3.49938 | opp_overlap 37065 37062, overlap 37046 37057 37055 TTGCATAACTAAGTA TGTTATGCGGCCGG TTA TCGACCGCATAACA TTATGGCTTATTTGC STM0033 38674 - 37103 - | putative 5'-nucleotidase TERM 42 38738 - 38700 - R 83 -4.5 -5.35815 | overlap 38703 38704 TACATTAAAGAAAAA CAATGCCTGTAGTCGTG TCATT CACGACTACAAACCGGG GAAATTAAGTAATAT TERM 43 38735 - 38703 - R 93 -9.2 -4.74052 | overlap 38700 38704 ATTAAAGAAAAACAA TGCCTGTAGTCGTG TCATT CACGACTACAAACC GGGGAAATTAAGTAA TERM 44 38734 - 38704 - R 85 -12.7 -3.41991 | overlap 38703 38700 TTAAAGAAAAACAAT GCCTGTAGTCGTG TCATT CACGACTACAAAC CGGGGAAATTAAGTA STM0034 39534 - 38773 - | putative outer membrane/exported protein STM0035 40131 - 41624 + | putative arylsulfatase TERM 45 41668 - 41703 + F 100 -11.2 -4.86731 | gap 1, overlap 41671 CACTTAGGGCGATGC CCACCTGATCCGGTCAC TCT GTG-CCGGATCAGGTTC TTTTATTTCAGGGAA TERM 46 41671 - 41700 + F 100 -17.3 -4.54026 | gap 1, overlap 41668 TTAGGGCGATGCCCA CCTGATCCGGTCAC TCT GTG-CCGGATCAGG TTCTTTTATTTCAGG TERM 47 42502 - 42515 + G 74 -8.1 -4.01411 | opp_overlap 42481 42483, overlap 42496 42510 GGCGGCCTGGTGCGG CCTGC CGCC GCAGG TTTGCGTTTTTGCTC TERM 48 42510 - 42521 + G 78 -5.8 -4.7254 | opp_overlap 42483, overlap 42496 42502 GGTGCGGCCTGCCGC CGCA GGTT TGCG TTTTTGCTCCCACCT STM0036 41723 - 42913 + | putative arylsulfatase regulator TERM 49 43370 - 43398 + G 70 -3 -4.78848 | GAATTACAAAAACTG TCCCGTCGCGCT AATCA AGCGGAACGCGA TTTTGTGTTTCCCGC TERM 50 43675 - 43685 + G 83 -8.2 -4.52589 | ATTTGATGTGGATTA CGGC CCC GCCG TTTTATATAAAAACG STM0037 42932 - 44185 + | putative cytoplasmic protein TERM 51 44303 - 44248 - f 72 -4.9 -4.58395 | gap 2, opp_overlap 44247 44262 CGGACGGCTTAAAAA TCCAGAGTATTAATTTTCGTGGTCCCC ATGA GGGG-CGATGAG-ATTAATACACTGGA GATTTATCATGAATA TERM 52 44584 - 44574 - g 87 -8.2 -4.58663 | AGGATGCGGCAAAAA CGGC GAT GCCG GTAGAACATCTTTAC TERM 53 45809 - 45799 - g 74 -6.8 -4.2558 | opp_overlap 45799 CACGTTTGATGAAAA TGGC CGC GCCA TCTCTTGCCAGCCTG STM0038 44312 - 46027 + | putative arylsulfatase TERM 54 46062 - 46079 + F 72 -9.1 -3.56704 | opp_overlap 46062, overlap 46058 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 55 46079 - 46062 - f 87 -6.9 -5.15634 | opp_overlap 46062 46058 GACTGCACTAAAAAA GTCCGGC GTAA GTCGGAC TTCATTTCGTAAAAA TERM 56 46656 - 46694 + G 93 -13.3 -3.80174 | gap 1, overlap 46657 CGCTGAAAATTTTCC TGATGGCGCTGGCGATCA TCGA TGATC-TCGGCGCCATCG TTATTATCGCACTGT TERM 57 46657 - 46693 + G 86 -14.6 -2.87622 | gap 1, overlap 46656 GCTGAAAATTTTCCT GATGGCGCTGGCGATCA TCGA TGATC-TCGGCGCCATC GTTATTATCGCACTG nhaA 46190 - 47356 + | pH-dependent sodium/proton antiporter TERM 58 47394 - 47373 - f 70 -10.1 -2.97743 | opp_overlap 47378, overlap 47372 CAGTACGAAGGAAAG GGGGAGCGA TGTA TCGCTCCCT TGCGACATTGAACAG TERM 59 47491 - 47505 + G 74 -4.9 -4.82901 | AAGGTTCTGTCGTGG GTGCC GCAGA GGCGC TTTTTCTGACGCCGC TERM 60 48123 - 48135 + G 70 -3.3 -4.82901 | overlap 48124 AAGGCGTTTGGCGCG ACGCA CGA TGCGA TTTTTGTGGCGCCGA nhaR 47418 - 48317 + | transcriptional activator NhaR TERM 61 48333 - 48369 + T 85 -12.3 -3.33261 | opp_overlap 48335 48354, overlap 48336 ACGTACCTACCGTAA TACTTCCGGCTGCGG TATTAAC CCGCAGCCGGAATCA TTCTACAAGTTCAGC TERM 62 48367 - 48335 - T 88 -14.9 -3.06492 | opp_overlap 48333 48336, overlap 48354 GTACCTACCGTAATA CTTCCGGCTGCGG TATTAAC CCGCAGCCGGAAT CATTCTACAAGTTCA TERM 63 48336 - 48366 + T 100 -18.4 -2.83747 | opp_overlap 48335 48354, overlap 48333 TACCTACCGTAATAC TTCCGGCTGCGG TATTAAC CCGCAGCCGGAA TCATTCTACAAGTTC STM0041 50411 - 48372 - | putative glycosyl hydrolase TERM 64 50124 - 50138 + g 71 -7.8 -4.0641 | opp_overlap 50124 CCGCAGGCGCCAGAA CTCCTG CAA CAGGGG TTTGTGTGGATGGCG STM0042 51824 - 50451 - | putative sodium galactoside symporter TERM 65 52248 - 52234 - R 100 -8.5 -5.64274 | opp_overlap 52234 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT TERM 66 52234 - 52248 + r 88 -8.5 -4.83169 | opp_overlap 52234 GCAGGCATAAAAAAA CCCGC TTTAC GCGGG TTTTTCTACAAAGCT rpsT 52543 - 52280 - | 30S ribosomal protein S20 yaaY 52649 - 52864 + | putative cytoplasmic protein ribF 52872 - 53810 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 67 54021 - 54003 - g 89 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCATATGCGAA TERM 68 55073 - 55050 - g 76 -3 -5.03314 | opp_overlap 55054 55070 55072, overlap 55051 55052 55054 TGCATGTCGAAAAAA TGCAGCACAG CTAT CCGTGCTGTT GGCGTCACAAAACGC ileS 53855 - 56689 + | isoleucyl-tRNA synthetase TERM 69 57053 - 57065 + G 75 -6.3 -4.65895 | GGCACGGCTTTGTTG TCGAT ATG ATCGA TTTTTACGTCGGCAA lspA 56689 - 57189 + | lipoprotein signal peptidase TERM 70 57199 - 57217 + F 70 -5.2 -4.45485 | GCATAAGCGTAAATA CCGGGTGG CGC TTATCCGG TTTTGTAGGTCTGAT TERM 71 57254 - 57297 + F 70 -5.3 -4.52703 | gap 2, opp_overlap 57236 57235 57255, overlap 57255 57295 AGCGCCATCAGGCAA ACGTGGTGCCGGATGGCGGTG AAAA CGCC-TTATCCGGC-CTACGG TTTTATCGTCCTTTG TERM 72 57255 - 57296 + F 70 -8.8 -3.30538 | gap 2, opp_overlap 57236 57235 57255, overlap 57254 57295 GCGCCATCAGGCAAA CGTGGTGCCGGATGGCGGTG AAAA CGCC-TTATCCGGC-CTACG GTTTTATCGTCCTTT slpA 57344 - 57793 + | FKBP-type peptidyl-prolyl cis-trans isomerase ispH 57796 - 58746 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 73 58885 - 58919 + F 77 -10.2 -3.4252 | opp_overlap 58893, overlap 58893 CTTTTTGCTATTCAT CTGAAAAACCAGCA CAATCGT TGCTGGTTTTTTGG TTGTAATGCCTACAG TERM 74 58911 - 58893 - f 74 -6 -4.62783 | opp_overlap 58885 58893 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTTGGTTGTAAT TERM 75 58893 - 58911 + F 85 -6 -5.33848 | opp_overlap 58893, overlap 58885 TATTCATCTGAAAAA CCAGCA CAATCGT TGCTGG TTTTTTGGTTGTAAT TERM 76 59769 - 59751 - g 76 -3.1 -4.98531 | GCTGGAAAGGAAAAA CGATTGA ACTGA TCGATCG CGGTGAAAGCTACTT STM0050 58946 - 60148 + | putative nitrite reductase TERM 77 60855 - 60905 + G 89 -8.9 -4.62336 | gap 1, overlap 60858 GTAGTATGCGCACTG GCGTCCGGATGCACGATCTCTGCG CTAT CGCCTGGCTGGTGCGTCCGGA-GC TTTTTACCCTGCAAT rihC 60164 - 61084 + | ribonucleoside hydrolase RihC STM0052 61792 - 61106 - | putative transcriptional regulator TERM 78 61144 - 61175 + g 79 -7.2 -4.40963 | TCTCCGGCCTGCCCA CTTTCCCGTAGCTG ATCT CCGCTTCGAGAAAG TTATTTTTCACGCCT TERM 79 61319 - 61344 + g 78 -6.8 -4.57581 | gap 1 GTTTTCATCAATTCC CCGCAG-TCCG CTATT CGGTTCTGCGG TTTGTTCTTTGGCCT TERM 80 61740 - 61720 - G 75 -6.1 -4.61527 | opp_overlap 61720 AAAACTGGGGAAAAA TCTTGATGG TGT CCACCAGGA TTTCCGCTAGCATCG STM0053 63413 - 61794 - | putative transcriptional regulator TERM 81 62475 - 62490 + g 73 -10.4 -3.37796 | opp_overlap 62475 62474 GCGAAAGCTAATAAC CCAGCC CTGA GGCTGG TTGTCAATAATGACC TERM 82 62541 - 62555 + g 100 -2.1 -6.12458 | TTTCATTTGGTTAAA GGTGA CGATC TCATC TTTTTTGTTTTTTTG TERM 83 63540 - 63518 - R 95 -12.1 -4.27192 | opp_overlap 63513 AAATTTGGATGAAAA TGGGATACG ACATG CGTATCCCA TCCACTATTACATCG STM0054 64849 - 63548 - | putative oxalacetate decarboxylase subunit beta STM0055 66637 - 64862 - | pyruvate carboxylase subunit B TERM 84 66390 - 66414 + g 70 -7 -4.1196 | CCGAGCAGGTTCTGG CCGCGCAGCA ACATC TGCAGCGGGG TTTTGGGCATGGCTT STM0056 66893 - 66654 - | oxaloacetate decarboxylase subunit gamma TERM 85 66878 - 66852 - G 73 -5 -4.59773 | overlap 66854 66857 CCCCATCCCTAAAAA CATCAGGGTGAA ACC TTCACCCAGTAG TACAGCTTCGTTCAT STM0057 68392 - 67052 - | putative citrate-sodium symporter TERM 86 67834 - 67818 - G 72 -11.5 -3.01708 | overlap 67807 TAAATTTCAGACAGA GGCACGG CGC CCGCGCC GTTACCACCGCCCAT TERM 87 68492 - 68506 + H 79 -4.4 -5.12068 | GAATGGTTGTGTTTT TAATTA ATT TAATTA TTTTTATTAACTCTG TERM 88 69096 - 69082 - g 71 -4.2 -4.62471 | overlap 69083 GTCAACCGGGAAAAA CGATCG GCG CCATCG TCATGAACGCCAATC TERM 89 69397 - 69415 + G 73 -5.9 -4.37886 | AACATCTGGCTCCAG CGCTGGG GATTA CCCATCG TTTTGTCGGCAGTGA citC2 68637 - 69680 + | putative citrate lyase synthetase citD2 69710 - 70003 + | citrate lyase subunit gamma TERM 90 70520 - 70556 + G 76 -12.2 -3.03771 | gap 1 CCGAGCTGTTCTACG CCCGCTGCGCAGTGCTG CATG CGGCGC-GCGTTGCGGG TATTGCCGCCTATGA citE2 70000 - 70869 + | putative citrate lyase beta chain TERM 91 71592 - 71580 - g 76 -3.3 -5.03314 | overlap 71581 71583 GGGATCCGGAAAAAA TCACC GCG GGTGC GATTCGTCTGTCCAG citF2 70880 - 72400 + | putative citrate lyase alpha chain/citrate-ACP transferase citX2 72400 - 72951 + | putative cytoplasmic protein TERM 92 73267 - 73277 + G 75 -6.8 -4.4267 | opp_overlap 73263, overlap 73274 TGGTGTGAATACCCA TCGC GGG GCGA TTTTCGCTTTTGGCC TERM 93 73274 - 73284 + G 70 -6.8 -4.15565 | overlap 73267 AATACCCATCGCGGG GCGA TTT TCGC TTTTGGCCTGCTGAG citG2 72929 - 73837 + | triphosphoribosyl-dephospho-CoA synthase TERM 94 73862 - 73893 + F 83 -8.8 -4.33274 | opp_overlap 73866, overlap 73864 73866 CTTTCATTCTCTCCA GCAATGATTCATCC TGCG GGATGAATCATGTC TTTTACTGATATCGC TERM 95 73864 - 73891 + F 79 -10 -3.76811 | opp_overlap 73866, overlap 73862 73866 TTCATTCTCTCCAGC AATGATTCATCC TGCG GGATGAATCATG TCTTTTACTGATATC TERM 96 73889 - 73866 - f 81 -12.6 -3.14344 | opp_overlap 73864 73862 73866 CATTCTCTCCAGCAA TGATTCATCC TGCG GGATGAATCA TGTCTTTTACTGATA TERM 97 73866 - 73889 + F 85 -12.6 -3.45743 | opp_overlap 73866, overlap 73864 73862 CATTCTCTCCAGCAA TGATTCATCC TGCG GGATGAATCA TGTCTTTTACTGATA dapB 74017 - 74838 + | dihydrodipicolinate reductase TERM 98 74893 - 74911 + F 100 -11.8 -5.26119 | opp_overlap 74893 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTGCCCC TERM 99 74911 - 74893 - f 95 -11.8 -3.99405 | opp_overlap 74893 TTAATTGATTACAAA GGGCAATA TAT TATTGCCC TTTTGTTTTTGCCCC TERM 100 74990 - 75004 + F 74 -7.1 -4.21933 | overlap 74984 CAGTTTCTTCGCCCA CGGCA TGTTC TGCCG TTGTTTTCGCGTTAA TERM 101 76955 - 76915 - g 80 -9.6 -3.92373 | gap 1, opp_overlap 76942 CACCGTACCGACAAA CCGGCGTTCAGCTTCCAGG GCCA CCCGGAGGC-GAGCCCCGG CCCGCACGATGCGGC TERM 102 76942 - 76986 + G 73 -9.2 -3.90729 | gap 2, opp_overlap 76915 TTCCAGGGCCACCCG GAGG-CGAGCCCCGGC-CCGCA CGA TGCGGCGCCGCTGTTCGACCAC TTTATCGAGCTTATT carA 75880 - 77028 + | carbamoyl phosphate synthase small subunit TERM 103 77090 - 77072 - g 74 -2.2 -5.07275 | opp_overlap 77082 77084, overlap 77076 GTACAGATATAAAAA GCATCCTG ATT CTGGGCGC GGGCCCGATTGTTAT carB 77047 - 80274 + | carbamoyl phosphate synthase large subunit TERM 104 80347 - 80328 - f 79 -10.8 -3.63707 | opp_overlap 80328 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG TERM 105 80328 - 80347 + F 100 -10.8 -5.80817 | opp_overlap 80328 AATATAATGTTGAAA GGGTTTCT GTAA AGAAACCC TTTTTTTATCTTGCG caiF 80548 - 80943 + | DNA-binding transcriptional activator CaiF caiE 81616 - 81020 - | carnitine operon protein CaiE TERM 106 81046 - 81071 + g 91 -9.7 -4.64676 | gap 1, overlap 81066 ATTTTGGCTTCACGT CCG-TCGTGCCT TTC AGGCGCGGTCGG TTTTCTTCGGCCTGC caiD 82510 - 81725 - | carnitinyl-CoA dehydratase TERM 107 82419 - 82401 - G 74 -3.1 -4.84642 | CGGAAATTAAGAAAA GCTTCAC CCATT GCAAAGC TGGTTTTGGCGTCAA TERM 108 82532 - 82562 + r 100 -12.6 -4.48743 | opp_overlap 82532, overlap 82533 82534 TCTCCAGATAAATAG TTTTCCGGCGGGAG GGA TTCCTGCCGGAAGG TTTATTTCAGATTTT TERM 109 82533 - 82561 + r 86 -13.9 -3.27619 | opp_overlap 82532, overlap 82532 82534 CTCCAGATAAATAGT TTTCCGGCGGGAG GGA TTCCTGCCGGAAG GTTTATTTCAGATTT TERM 110 82534 - 82560 + r 90 -15.2 -2.55487 | opp_overlap 82532, overlap 82533 82532 TCCAGATAAATAGTT TTCCGGCGGGAG GGA TTCCTGCCGGAA GGTTTATTTCAGATT caiC 84117 - 82564 - | putative crotonobetaine/carnitine-CoA ligase TERM 111 83844 - 83864 + g 95 -11.1 -4.59773 | opp_overlap 83844 GTAAGCGGGCATTAA TCGGCACCA TAA TGGCGCCGA TTTTTGCCAGTCCAA TERM 112 83864 - 83844 - G 84 -13.3 -3.15579 | opp_overlap 83844 GTAAGCGGGCATTAA TCGGCACCA TAA TGGCGCCGA TTTTTGCCAGTCCAA TERM 113 84142 - 84178 + r 100 -13.8 -3.79519 | gap 1, opp_overlap 84137 TCCACTGAAATCAGG CGTGA-GCGCTAACCGG AAAA CCGATTAGCGCATCGCG TTTAATCCTCAACTT caiB 85397 - 84180 - | crotonobetainyl-CoA:carnitine CoA-transferase TERM 114 85479 - 85440 - R 77 -10.6 -3.30243 | opp_overlap 85472 85473, overlap 85443 85445 ATGTAGGCCGGATAA GCACAGCGCCATCCGGCA TGAT TGCCTGATGGCGACGCCC CGCGTCTTATCAGGC TERM 115 85476 - 85443 - R 82 -13.1 -2.8294 | opp_overlap 85472 85473, overlap 85440 85445 TAGGCCGGATAAGCA CAGCGCCATCCGGCA TGAT TGCCTGATGGCGACG CCCCGCGTCTTATCA TERM 116 85474 - 85445 - R 78 -12.1 -2.96274 | opp_overlap 85472 85473, overlap 85443 85440 GGCCGGATAAGCACA GCGCCATCCGGCA TGAT TGCCTGATGGCGA CGCCCCGCGTCTTAT TERM 117 85473 - 85485 + r 70 -9.1 -3.30124 | opp_overlap 85445 85443 85440, overlap 85472 TGATTGCCTGATGGC GACGC CCC GCGTC TTATCAGGCCTACAA caiA 86651 - 85509 - | crotonobetainyl-CoA dehydrogenase caiT 88203 - 86686 - | L-carnitine/gamma-butyrobetaine antiporter fixA 88684 - 89454 + | putative electron transfer flavoprotein FixA fixB 89470 - 90411 + | putative electron transfer flavoprotein FixB TERM 118 91692 - 91674 - g 95 -5.2 -5.42259 | overlap 91676 CCATGCGTAAAAAAA TCCTGCGC CAT GCGAAGAA AGTGGGCTTCATTAA fixC 90461 - 91747 + | putative oxidoreductase FixC fixX 91744 - 92031 + | putative ferredoxin TERM 119 92069 - 92127 + F 86 -14.4 -2.57931 | opp_overlap 92066 92069, overlap 92078 92117 TTGGCCGGATAAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGGAAACGC CTTATCCGGCCTACA TERM 120 92127 - 92069 - f 78 -12.2 -2.52623 | opp_overlap 92069 92078 92117, overlap 92066 TTGGCCGGATAAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGGAAACGC CTTATCCGGCCTACA TERM 121 92468 - 92480 + G 70 -5.5 -4.41348 | opp_overlap 92449 TATCGGCGTTATCTC CGTGG CGA CCATG TTTGTTTCCACGCCG yaaU 92178 - 93518 + | putative transport protein STM0080 93607 - 93837 + | putative outer membrane lipoprotein STM0081 94131 - 94547 + | putative secreted protein STM0082 95061 - 94771 - | putative secreted protein TERM 122 95787 - 95777 - H 73 -4 -4.80077 | CTAAAATAAAAACAA TGAA CTT TTCA TCTAAATAATTTTTC TERM 123 95987 - 95976 - g 100 -4.4 -6.13503 | GAGTAATAAAAAAAA TCTG TCCG CAGA AGAGACGGATCTTAC TERM 124 96098 - 96082 - g 72 -3.6 -4.73388 | overlap 96084 AAGGCTGATGAAAAA TGCGCC GTCAA GGCGAA ACCGGCGTGGGATAA TERM 125 97523 - 97469 - g 95 -2.8 -5.76237 | GAGATAAACAAAAAA CGGTGGCGCAAATCAAGCAGGAAATA TCT CATTTGCATCCTGATTTCAGCCATCG TTCAGGGACGCGCAT STM0084 95959 - 97848 + | putative sulfatase TERM 126 98133 - 98151 + F 88 -12.4 -3.47915 | overlap 98129 CCGGAGGCAGGACGG CGCCAGCT CCT GGCTGGCG TTAATTCAATTTTTT yabF 98255 - 98785 + | glutathione-regulated potassium-efflux system ancillary protein KefF TERM 127 99739 - 99765 + G 95 -15.2 -3.38812 | opp_overlap 99747, overlap 99737 99746 GGCCGCTGGGCGTAC CGGCAAAACAGC GTC GCTGGTTTGCCG TCTTATTAGGCCAGG TERM 128 99757 - 99747 - g 70 -6.8 -4.11216 | opp_overlap 99746 99739 99737 GGCGTACCGGCAAAA CAGC GTC GCTG GTTTGCCGTCTTATT TERM 129 99882 - 99894 + G 77 -4.7 -4.93296 | overlap 99881 99883 GTCGCGCTGTCGATG GCGGC TAC GCCGA TTTTTCTGGTGCTGC kefC 98778 - 100640 + | glutathione-regulated potassium-efflux system protein KefC folA 100839 - 101318 + | dihydrofolate reductase TERM 130 101323 - 101361 + T 82 -13.3 -3.02263 | gap 2, opp_overlap 101345, overlap 101338 AGCGTCGTTAACGCT GTAGTGCCGGATGGCGGCG AAA CGCC-TTATCCGGC-CTAC TCTTGAGCCAGATGT TERM 131 101400 - 101345 - T 72 -9.1 -3.53811 | opp_overlap 101338 101323 CGGATGGCGGCGAAA CGCCTTATCCGGCCTAC-TCTTGAGCC AGAT GTCGCCAGATGTAGGCCTGATAAG-CG TAGCGCCATCAGGCA apaH 102272 - 101424 - | diadenosine tetraphosphatase apaG 102660 - 102283 - | ApaG ksgA 103484 - 102663 - | dimethyladenosine transferase pdxA 104470 - 103481 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 132 104451 - 104412 - G 71 -10.6 -3.27653 | overlap 104410 104449 AGTTGGACGACAAGA TCGGGGCCACTCCCGGCG GGTT CGCCGGGAGTGATAACAA CGCGTTGCGCACTGC surA 105756 - 104470 - | peptidyl-prolyl cis-trans isomerase SurA TERM 133 105406 - 105363 - G 72 -11.2 -3.14564 | gap 1 TCATCTCTTTACGAA TCTGG-TTACGGTAGGTTGAA TAG TTCAGCCCATCGTAAGCCAGA CGGCTGCGCATCTGA imp 108170 - 105810 - | organic solvent tolerance protein TERM 134 106452 - 106436 - G 71 -5.9 -4.23674 | opp_overlap 106451 TTTGACCAACAGAAA CGTTAAA ACG TTCAACG GCGGCATCATCATAA TERM 135 108454 - 108480 + G 77 -8.6 -4.10161 | opp_overlap 108447 AAGATAATTGGCGTC GCCGTAGCCC TGATGAT GGGCGGCGGC TTTTGGGGCGTGGTC TERM 136 108571 - 108582 + G 77 -3.6 -5.00616 | opp_overlap 108564 GCCAACCAGCGGGAA CGGC AGGC GCTG TTTTTTGCCACCACC djlA 108424 - 109236 + | DNA-J like membrane chaperone protein rluA 109990 - 109331 - | 23S rRNA/tRNA pseudouridine synthase A TERM 137 110037 - 110025 - R 70 -9.1 -3.44051 | overlap 110028 GCGTGACGACGATAA GACGC AGC GCGTC CAGACGCCAGCCTGC hepA 112908 - 110002 - | ATP-dependent helicase HepA TERM 138 110349 - 110365 + g 75 -3.6 -4.96848 | overlap 110344 110343 110347 CAAACTCGACCTGGG CGGCCA GATTG TTGCCG TTTTTATCTAACAGC TERM 139 110469 - 110487 + g 85 -6.7 -4.85782 | gap 1 CCAGTTCGACCAGCA GCG-TGCC GACG GGCAGCGC TTTATTTTTCAACAG TERM 140 110857 - 110874 + g 70 -6.9 -4.15106 | overlap 110847 110850 110871 CAGCAGGCGGTCGCG GCCCTGT TCTA ACTGGGC TTTTAGCGCTTCATG polB 115433 - 113082 - | DNA polymerase II TERM 141 113285 - 113295 + g 81 -6.8 -4.71426 | ACTGCGCCGGACGAC CCTG CTT CAGG TTTTGTTCATCCGCC STM0098 116097 - 115477 - | putative secreted protein TERM 142 115961 - 115926 - G 89 -9 -4.56597 | overlap 115928 GTCTGGCCTGAAAAA CGGGAGAAGGCGTT TTTCCGCT AACGCCTGCTCCTG CGACAATCGCGCAGT TERM 143 116568 - 116587 + H 71 -3.7 -4.78981 | opp_overlap 116568 TATTTCTCGGATTAA CAAAAAA GCGATA TTTTTTG TTTGTTTTAATTAAT TERM 144 117228 - 117209 - g 83 -12.8 -3.20858 | opp_overlap 117209 GACCAGATTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA TERM 145 117209 - 117228 + G 95 -10.6 -4.58283 | opp_overlap 117209 GACCAGATTCATCAA CGCGCCCC CCAT GGGACGCG TTTTTAGAGGCATTA STM0100 116816 - 117235 + | putative cytoplasmic protein araD 117936 - 117241 - | L-ribulose-5-phosphate 4-epimerase araA 119579 - 118077 - | L-arabinose isomerase TERM 146 119031 - 119048 + g 74 -7.7 -4.18197 | gap 1 GACTTCACGCATATT GTC-GCCG AAG CGGCAGAC TTTTAGCTGGCGGGT araB 121299 - 119590 - | ribulokinase TERM 147 120662 - 120637 - G 71 -7.6 -4.00756 | gap 2, opp_overlap 120637 GAGTTCATCAAAGAA GCTCGCGGGCGG CAGA CCGCCC-C-AGC TTTCATGCCACAGCG araC 121640 - 122485 + | DNA-binding transcriptional regulator AraC yabI 122604 - 123371 + | hypothetical protein thiQ 124117 - 123410 - | thiamine transporter ATP-binding subunit thiP 125711 - 124101 - | thiamine transporter membrane protein TERM 148 124330 - 124311 - G 70 -9.2 -3.67564 | opp_overlap 124298 124317, overlap 124301 124298 AAGTACGCAGGCAAA CGCCAGCG CCTG CGCCAGCG GACGTTTCAGCGCCC tbpA 126670 - 125687 - | thiamine transporter substrate binding subunit yabN 128506 - 126848 - | transcriptional regulator SgrR TERM 149 127300 - 127312 + g 71 -4.7 -4.56597 | TCAGCGTGAGGGTTT CCAGC CCG GCGGG TTTTTCGCCCGGGCC TERM 150 128783 - 128805 + r 100 -16.4 -5.95539 | opp_overlap 128780 AGCCTAAAATCACCC GCCAGCAGAT AAT ATCTGCTGGC TTTTTTTATTTCGGC TERM 151 128942 - 128924 - R 100 -8.8 -5.28826 | AAATCGTATAAAAAA TGCCGGAA TAT CCCCGGCA TGAGCGACTGATGAG leuD 129662 - 129057 - | isopropylmalate isomerase small subunit leuC 131073 - 129673 - | isopropylmalate isomerase large subunit TERM 152 130125 - 130103 - G 81 -12 -3.52192 | TGTAAGCCCATATAA GCCAGCGC TTTTTCG GCGCTGGC GCGCTCAACCGGATC TERM 153 130194 - 130225 + g 74 -11.6 -3.27475 | gap 1, overlap 130193 130197 AAATCACCTGGCCCG GATTCGTGCCCCAGG TCA CCTGCGGCGCGA-TC TCTTCTGCTCGCAGG TERM 154 130197 - 130223 + g 95 -14.4 -3.20322 | overlap 130194 130193 TCACCTGGCCCGGAT TCGTGCCCCAGG TCA CCTGCGGCGCGA TCTCTTCTGCTCGCA TERM 155 130481 - 130502 + g 74 -7.9 -4.12188 | AATTCAACCACGTGT CCGGTGCCG CCGG CGCTACCGG TTTTACCGATGATCG TERM 156 130592 - 130604 + g 70 -9.1 -3.6502 | ATGGTTTTAGCGCGT CCCTG TTT CAGGG TTTGCGTCGCCAGTA leuB 132167 - 131076 - | 3-isopropylmalate dehydrogenase TERM 157 132088 - 132070 - G 74 -6.6 -4.36262 | opp_overlap 132070, overlap 132071 ATACGCATATCAAAA CGGCTGCG TAC CGCATCCA TAACTTTCAGGGCTT leuA 133738 - 132167 - | 2-isopropylmalate synthase TERM 158 132204 - 132214 + g 70 -5.4 -4.44355 | TCTTTATTTTGAGCT TTGC GTT GCAA TTCTTTTTCAACTTC TERM 159 133781 - 133808 + r 100 -14.2 -3.75629 | opp_overlap 133786, overlap 133786 TTGCGTCAGGCATAA AAAAACCCGCGC AACG GCGCGGGTTTTG TTTGACTTCGAGCTG TERM 160 133803 - 133786 - R 100 -14.1 -5.64274 | opp_overlap 133781 133786 TCAGGCATAAAAAAA CCCGCGC AACG GCGCGGG TTTTGTTTGACTTCG TERM 161 133786 - 133803 + r 100 -14.1 -4.94058 | opp_overlap 133786, overlap 133781 TCAGGCATAAAAAAA CCCGCGC AACG GCGCGGG TTTTGTTTGACTTCG leuL 133912 - 133826 - | leu operon leader peptide leuO 134569 - 135513 + | leucine transcriptional activator TERM 162 135520 - 135556 + F 100 -16.2 -4.65838 | opp_overlap 135518 135526 AAGCGATAAAACCGG GCAGAATAAATCAGAA ACAAA TTCTGGTTTATTCTGC TTTTTAGCGTATATC ilvI 135898 - 137559 + | acetolactate synthase 3 catalytic subunit ilvH 137562 - 138053 + | acetolactate synthase 3 regulatory subunit TERM 163 138177 - 138202 + F 100 -9 -5.75945 | opp_overlap 138175 CCAACAGGAATTATC GCCCAACCCA ATATCA TCGGTTGGGC TTTTTTTTGCGAAAT fruR 138337 - 139341 + | DNA-binding transcriptional regulator FruR yabB 139947 - 140405 + | cell division protein MraZ mraW 140407 - 141348 + | S-adenosyl-methyltransferase MraW TERM 164 141425 - 141438 + G 70 -6.7 -4.19238 | TGCCTTGCCTGGCGT GATCG GTGA CGATC TTTTGCGGTTCGGGA TERM 165 141669 - 141656 - g 81 -8.1 -4.2803 | opp_overlap 141655 141653 GATCGCAACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCCC ftsL 141345 - 141710 + | cell division protein FtsL ftsI 141726 - 143492 + | division specific transpeptidase TERM 166 143838 - 143802 - g 70 -7.1 -4.14739 | overlap 143804 143832 TGAGCCATCTGAAAA CATGCGTCTGGTGGCGG TGA CCGGCACCAATGGCAAG ACCACCACCACCCAA TERM 167 144606 - 144580 - g 75 -6.4 -4.57073 | opp_overlap 144588 GATGCGCTGGAAAAA GCGTTGCAGGCG GCG CGTCTGCATTGC GCCGGAAAATTGTGG murE 143479 - 144966 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murF 144963 - 146321 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 168 147252 - 147266 + G 71 -5.7 -4.2349 | opp_overlap 147251 147252 TGGGTTCCTTTAAAC TACGC GGACA GCGTA TTTTCCGTATGGCGC mraY 146315 - 147397 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 147400 - 148716 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 169 149497 - 149524 + G 77 -7.8 -4.26076 | gap 1 ATCCGTTCGGCAGCG GTTATCAGCTGAC GCA GTC-GCTGATGGC TTTTGGTCGCGGTGA ftsW 148716 - 149960 + | cell division protein FtsW murG 149957 - 151024 + | N-acetylglucosaminyl transferase murC 151143 - 152618 + | UDP-N-acetylmuramate--L-alanine ligase TERM 170 153019 - 153004 - g 95 -5.4 -5.30348 | gap 1, opp_overlap 153004 AGCGAAGAACAAAAA GCG-CGA ATT TCGGCGC TGGGTTTACCGCTGA ddl 152611 - 153531 + | D-alanine--D-alanine ligase ftsQ 153533 - 154363 + | cell division protein FtsQ ftsA 154360 - 155622 + | cell division protein FtsA ftsZ 155683 - 156834 + | cell division protein FtsZ TERM 171 157014 - 157004 - g 82 -5.4 -5.04385 | CACACCGGCAAAAAA GTCA CCC TGAC ATTACGCCCTGCGCC TERM 172 157779 - 157769 - g 70 -6.8 -4.08216 | GCAGTCCTGGCAAAA CAGG AAG CCTG GGAATTTGTGACCTT lpxC 156935 - 157852 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 173 157920 - 157877 - f 70 -10.3 -2.52946 | opp_overlap 157864 157877, overlap 157876 157875 CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTCG TTTTTTTACTATCCT TERM 174 157877 - 157920 + F 100 -10.3 -5.59357 | opp_overlap 157877 157876 157875, overlap 157864 CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTCG TTTTTTTACTATCCT TERM 175 157987 - 158000 + F 74 -5.9 -4.64334 | opp_overlap 157987 GGTTAAATGGAAACA CGGCG CGTT CGCTG TTTTCTTAGCCGATT yacA 158130 - 158627 + | SecA regulator SecM TERM 176 158657 - 158673 + F 74 -11.5 -2.79175 | overlap 158656 TTTACTTTATTTGTA GCTCCGC GGC GCGGGGC ATTTGAGACTTTATT TERM 177 159630 - 159643 + G 70 -9.5 -3.36515 | overlap 159628 CGTCACCGCCGCGCT GCGCG CGCA CGCGC TGTTTACCCGTGACG TERM 178 159805 - 159795 - g 75 -6.8 -4.50661 | overlap 159796 159798 AATTCAGAATGAAAA CCAG ACG CTGG CGTCTATCACCTTCC secA 158689 - 161394 + | preprotein translocase subunit SecA TERM 179 161531 - 161502 - f 85 -13.7 -3.11072 | opp_overlap 161508, overlap 161508 GGCATTGAACACAGA TAAAAAGGCGCAG GCGA CTGCGCCTTTTTT ATGGATGCAACAAGA TERM 180 161525 - 161508 - f 100 -12.7 -5.09685 | opp_overlap 161508, overlap 161502 GAACACAGATAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA TERM 181 161508 - 161525 + F 100 -12.7 -5.28176 | opp_overlap 161508 161502 GAACACAGATAAAAA GGCGCAG GCGA CTGCGCC TTTTTTATGGATGCA mutT 161546 - 161941 + | nucleoside triphosphate pyrophosphohydrolase yacG 162454 - 162263 - | zinc-binding protein TERM 182 162403 - 162377 - G 72 -3.7 -4.77165 | GCGTTTAGAACAAAA TGGGCGGAA GGGGCTAAT TTCCCCCCA GACGACCGGTTTACC yacF 163207 - 162464 - | hypothetical protein coaE 163827 - 163207 - | dephospho-CoA kinase TERM 183 163435 - 163458 + g 74 -4.5 -4.7254 | overlap 163456 CGTTTCGGGCGTCAC GTCAACCAC CAGTAC GCGGTTGGC TTTTTGATACAGCCT TERM 184 163619 - 163608 - G 74 -2.2 -5.0538 | overlap 163610 CCGGATGCGAAAAAA TACG CTCA CGCA GCGCCCGGCGACGTA TERM 185 164421 - 164390 - g 74 -2.2 -5.03314 | gap 1, opp_overlap 164399, overlap 164392 CTGATTTCGAAAAAA CCGTGCAG-ATTCTG GCG CTGAATCCTGCGCTG AACTTTGTCTGTATT guaC 164053 - 165096 + | guanosine 5'-monophosphate oxidoreductase TERM 186 165103 - 165126 + T 93 -14.6 -3.32963 | opp_overlap 165099 AGCCTCTAATATTCT GGCTGGCGTA AATG TGCGCCAGCC TTATCCCATCCCGCT hofC 166329 - 165127 - | type IV pilin biogenesis protein hofB 167704 - 166319 - | hypothetical protein ppdD 168151 - 167714 - | putative major pilin subunit TERM 187 168363 - 168341 - R 100 -17 -2.91582 | CAGGTGATTTATAGA CCCGACGGCG CAG CGCCATCGGG TGGAGAGGATCAGCA nadC 169266 - 168373 - | quinolinate phosphoribosyltransferase ampD 169354 - 169917 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 169914 - 170768 + | regulatory protein AmpE TERM 188 170768 - 170791 + T 73 -9.6 -3.4252 | gap 1 TGGGGCATTAGTGTA GCGTT-GTGCC GAT GGCGCTAACGC TTATGCTGCCTACAA STM0148 171810 - 170860 - | putative cytoplasmic protein STM0149 173216 - 171810 - | Na+/galactoside symporter TERM 189 172093 - 172065 - G 72 -3.8 -4.82667 | gap 1, opp_overlap 172073, overlap 172066 CCAGGAGAGCAAAAA GCC-GACCATCGC CCCG GCAATCGCCAGGC CCAGTTTCAGGAAGA TERM 190 172132 - 172150 + g 74 -6.7 -4.27584 | overlap 172114 CCGGAGAAGCTGATA CCGGTAA TGCGT TTGCCGG TTTTCCATTCGCCGT TERM 191 172308 - 172284 - G 71 -7.7 -4.03815 | overlap 172285 172298 ATCAAAGAAATAGAA CGCGCAGGAGA AAA TCGCCAGCGCA ATATTGGTCCAGAAA TERM 192 173362 - 173339 - R 100 -16 -3.51924 | CTGTGAGGCAGATAA CACCCTCCCC GGAC GGGGAGGGCG GAAAAGTAACGCCAC aroP 174753 - 173380 - | aromatic amino acid transporter TERM 193 174537 - 174521 - G 74 -7.9 -4.11484 | opp_overlap 174524, overlap 174524 GCGAAGTGGCTAAAA GAGCCGG CGA CCGGTTC TTCAACCACCATCTC pdhR 175316 - 176080 + | transcriptional regulator PdhR TERM 194 176203 - 176149 - f 74 -8.1 -3.90112 | gap 1, opp_overlap 176170, overlap 176153 176156 TGCGCGGCAACTAAA CGCAGAACCTGTCTTATTAAGCTTTC TCAC GAAAGTTTAATGGGACAGGTTCCA-G ATAACTCAACGTATT TERM 195 176200 - 176153 - f 86 -14.4 -2.70979 | opp_overlap 176170, overlap 176149 176156 CGGCAACTAAACGCA GAACCTGTCTTATTAAGCTTTC TCAC GAAAGTTTAATGGGACAGGTTC CAGATAACTCAACGT TERM 196 176197 - 176156 - f 79 -10.3 -3.49878 | opp_overlap 176170, overlap 176153 176149 CAACTAAACGCAGAA CCTGTCTTATTAAGCTTTC TCAC GAAAGTTTAATGGGACAGG TTCCAGATAACTCAA TERM 197 178355 - 178331 - g 71 -12.1 -2.50479 | overlap 178330 178327 178335 CTGAACGAAAACTAC CACATGCCGGC CAT GCCAGCAGGTG CCGAGGAAGGTATCC aceE 176240 - 178903 + | pyruvate dehydrogenase subunit E1 TERM 198 179222 - 179194 - g 70 -5.2 -4.49353 | gap 1, overlap 179197 179198 GCAGAAGAGAAGAAA GAAGC-GGCGCCG GCAG CAGCACCTGCTGC GGCAGCGGCGAAAGA TERM 199 179231 - 179197 - g 100 -12.9 -4.33203 | overlap 179194 179198 GAAGAGAAGAAAGAA GCGGC-GCCGGCAGCAG CAC CTGCTGC-GGCAGCGGC GAAAGACGTTCACGT TERM 200 179229 - 179198 - g 83 -13 -3.18295 | gap 1, overlap 179194 179197 AAGAGAAGAAAGAAG CGGCGCCGGCAGCAG CAC CTGCTGC-GGCAGCG GCGAAAGACGTTCAC TERM 201 179510 - 179488 - g 70 -9 -3.69323 | overlap 179467 GCAGCACCAGCGAAA GCGGAAGCCG CTC CGGCTGCGGC TGCTCCAGCAGCAGC TERM 202 180320 - 180310 - g 71 -8.2 -3.78775 | opp_overlap 180310 GTCTTCATCATGAAA GCGG TTG CCGC TGCTCTGGAACAGAT aceF 178918 - 180807 + | dihydrolipoamide acetyltransferase TERM 203 180832 - 180815 - f 100 -14.1 -4.28774 | opp_overlap 180815 TGATGTAAGCGAAAA GCCGGCC CGAC GGCCGGC TTTTTTTGATAATCT TERM 204 180815 - 180832 + F 100 -14.1 -5.56568 | opp_overlap 180815 TGATGTAAGCGAAAA GCCGGCC CGAC GGCCGGC TTTTTTTGATAATCT TERM 205 181788 - 181775 - g 78 -2.3 -5.16572 | opp_overlap 181781 ATGGAAGGCAAAAAA GCCCC GGCT GAAGC GCAGCGTTATGATGC TERM 206 181871 - 181843 - g 73 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCGGGC AAA GCTGGCGTGGAAG TTGACGACCGTGGCT lpdA 181007 - 182431 + | dihydrolipoamide dehydrogenase TERM 207 182485 - 182470 - f 100 -10.4 -5.37043 | opp_overlap 182470 ACCCGATACAAAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG TERM 208 182470 - 182485 + F 100 -10.4 -5.64274 | opp_overlap 182470 ACCCGATACAAAAAA GCGGCT TTAC AGCCGC TTTTTTTATGCATGG STM0155 182720 - 183004 + | putative outer membrane protein STM0156 183833 - 183042 - | putative periplasmic protein TERM 209 183322 - 183341 + g 71 -4.9 -4.67234 | opp_overlap 183335, overlap 183324 183335 ACGTCGCCTGCTTTG GTTGGCC AGTACA GGCCATC TTTTTGGCCTTCGCT TERM 210 183693 - 183706 + g 73 -5.9 -4.42765 | GTCATCGCCCAGTAG CGCGG TAAG CTGCG TTTCGTTTTTTCCGG yacH 185468 - 183846 - | putative outer membrane protein TERM 211 184155 - 184182 + g 70 -3.2 -4.68724 | gap 1, overlap 184157 GGATTTATTCAGTGT CTGCTG-CGCCGC CTC GCGACGACTGCTG TTTTGTGTTCCGTCA TERM 212 186383 - 186353 - g 76 -3.3 -5.00616 | gap 1, opp_overlap 186338 CGCTGGCGGAAAAAA TCACC-GTCACCGT TTTC AAAGTGACCGGCGA AACGAATACCGACGA TERM 213 187585 - 187561 - g 71 -5.7 -4.30987 | ACCGTTGAGAAGAAA GGCAAGAAAAA CAT CTTCTCTGGCC GCATCCTGGAAATCG acnB 185857 - 188454 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 214 188467 - 188483 + T 100 -10.8 -5.19251 | TAATTTACATTTTAA GGGGGC TAATT GCCCCC TTTTTATTCATATTA STM0159 189357 - 188515 - | putative restriction endonuclease yacL 189603 - 189965 + | hypothetical protein TERM 215 190047 - 190063 + F 100 -13.7 -5.24129 | opp_overlap 190043 TCGCCAAACATTCCA GCCGGGA GTA TCCCGGC TTTTTTATAGCAGAA TERM 216 190346 - 190334 - g 78 -6.9 -4.65895 | opp_overlap 190345 TGCCTTATTTAAAAA CGGCG CGG CACCG CTGATTGGCGCTTTT TERM 217 190878 - 190897 + G 71 -4.2 -4.56883 | ATTCTGCTCGGCGTG CTGACAAC GTTC GTTGGCGG TTTCTTTAATATTCG kdgT 190200 - 191153 + | 2-keto-3-deoxygluconate permease TERM 218 191864 - 191848 - g 84 -13.7 -3.08798 | ACTTTTTATGCAAGA CCGGCAG CGG CTGCCGG TGCTGGTGGTGGCCG STM0162 191150 - 192421 + | putative inner membrane protein pdxA 192411 - 193394 + | 4-hydroxythreonine-4-phosphate dehydrogenase 2 TERM 219 193656 - 193617 - g 100 -15 -4.90869 | overlap 193620 193621 193643 ACCACCAATGAAAAA CAACTGCGATCGCCCGCT GAAA AACGGGCGATCGCACGCG TTGCCGCATCGCTGG TERM 220 193653 - 193620 - g 100 -17.5 -4.54681 | overlap 193617 193621 193643 ACCAATGAAAAACAA CTGCGATCGCCCGCT GAAA AACGGGCGATCGCAC GCGTTGCCGCATCGC TERM 221 193652 - 193621 - g 100 -21 -3.31182 | overlap 193620 193617 193643 CCAATGAAAAACAAC TGCGATCGCCCGCT GAAA AACGGGCGATCGCA CGCGTTGCCGCATCG STM0164 193404 - 194171 + | putative transcriptional regulator speD 194995 - 194201 - | S-adenosylmethionine decarboxylase TERM 222 194977 - 194987 + g 72 -2.4 -4.93595 | GATTGTTAAAGCCAT GCAG TTT CAGC TTTTTCAATTTTTAT speE 195876 - 195016 - | spermidine synthase TERM 223 195958 - 195933 - R 81 -12.7 -3.16154 | opp_overlap 195936, overlap 195936 CAACATCATAGCTAA CAATGACCGTG GATG CACGGTCATTA TTTCAGCAATAGGAT TERM 224 195936 - 195955 + r 95 -12.2 -3.91716 | opp_overlap 195936 195933 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG TERM 225 195955 - 195936 - R 93 -12.2 -3.71487 | opp_overlap 195936, overlap 195933 CATCATAGCTAACAA TGACCGTG GATG CACGGTCA TTATTTCAGCAATAG yacC 196330 - 195983 - | putative periplasmic protein TERM 226 196583 - 196608 + G 70 -6.7 -4.07568 | CTGGGGGTTGCATCA GCGCTGCCGCT GTGG AGCCGCGCCGC TTTTGCCGCCGAACG TERM 227 197005 - 196964 - g 71 -8.5 -3.87994 | opp_overlap 196957, overlap 196966 196974 ATTCATCCGCACAAA CACGGCAAAACCGGGCGCC AGGT GGCGATGGGCCTTGCCGGG CTGGTGCTGATTGAA TERM 228 197003 - 196966 - g 71 -9.7 -3.52906 | opp_overlap 196957, overlap 196964 196974 TCATCCGCACAAACA CGGCAAAACCGGGCGCC AGGT GGCGATGGGCCTTGCCG GGCTGGTGCTGATTG TERM 229 197984 - 197972 - g 76 -10.5 -3.70811 | overlap 197966 197965 TCAGAGAACGGCAAA GCGCC AGC GGCGC ACAGAACGGGCTGGA cueO 196532 - 198142 + | multicopper oxidase TERM 230 198193 - 198212 + T 100 -15 -3.35358 | opp_overlap 198193, overlap 198187 CGCCACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG TERM 231 198212 - 198193 - T 100 -15 -3.30124 | opp_overlap 198187 198193 CGCCACCCGGCACAA TGCCCGGC ATAC GCCGGGCA TTAATGGTTATTTCG gcd 200610 - 198220 - | glucose dehydrogenase TERM 232 199030 - 199044 + g 70 -7.1 -4.07885 | GAACGGCTGAGTTTT GGCGA CGTAA TCGCC TTTTGCCGCGCCCTG TERM 233 199050 - 199068 + g 75 -5.8 -4.56597 | CGTAATCGCCTTTTG CCGCGCCC TGC GGGACCGG TTTTTCCGGGGCGGG TERM 234 200858 - 200838 - g 71 -11.9 -2.53015 | ATACTGTTGAAGTCA TGATCCCCG AAG CGGAGATCA AAGCACGTATTGCCG hpt 200816 - 201352 + | hypoxanthine-guanine phosphoribosyltransferase yadF 202072 - 201410 - | carbonic anhydrase TERM 235 201651 - 201663 + g 73 -5.5 -4.56597 | AGCGCGTCCAGACGT TGCTC TTC GGGCA TTTTTCCCAACAGCG TERM 236 202862 - 202846 - g 76 -5.1 -4.72986 | TACCTCCATGAAAAA TCTGCTT TCA AAGCTGA AATCGGAGACGTTTA yadG 202181 - 203107 + | putative ABC-type multidrug transport system ATPase component TERM 237 203337 - 203349 + G 76 -3.3 -5.00616 | overlap 203328 TAACTCCTACGCGAA TGTCG CGT CGTCA TTTTTTAGCGCCAAG TERM 238 203650 - 203664 + G 71 -6.4 -4.2828 | overlap 203639 CTGACGCCGCTGACC TACCTC GGC GGGGTA TTTTACTCGCTGACG yadH 203104 - 203874 + | putative transport protein stiH 205070 - 203991 - | putative fimbrial protein precurosr TERM 239 204473 - 204487 + g 71 -4.9 -4.58395 | GGGGAATATTATCTC CGCTG CTGCC CGGCG TTTTTGACAAATAGA TERM 240 204966 - 204991 + g 71 -10.4 -3.17723 | opp_overlap 204961 204962 AAAGAAATTATGCGT GCCGCTGGTG GGTTGA CACCAGCCGC TTCCGTTGCCCATCG stiC 207625 - 205079 - | putativie fimbrial usher TERM 241 205244 - 205213 - G 81 -13 -3.13403 | overlap 205211 205236 GGCCGCTGAGGAAGA CCTGGCCTTTATCG CCGA CGATACTGGCCAGG TTCGCATCCTGCCCA TERM 242 205539 - 205549 + g 71 -8.2 -3.91911 | opp_overlap 205531, overlap 205534 ACCGAAACGCCGCTG GCGC CGG GCGC TTTAATTAAAATCGC TERM 243 206896 - 206924 + g 76 -12.5 -2.8294 | overlap 206895 CGGCGGTGAACTGGC TTTTCAGCGCGAT AAT GTCGCGCTGTAAA TAGTTATAAACGCTG TERM 244 207434 - 207447 + g 87 -8.1 -4.58466 | opp_overlap 207431, overlap 207431 AGTGACGTAATAGGT GCCAG GCAG CTGGC TTTTGTCGTTATCAA stiB 208335 - 207652 - | putative fimbrial chaparone TERM 245 208377 - 208356 - R 95 -11.5 -4.68209 | overlap 208358 ACCTCAATAAACAAA GGGGCCAGC CGAC GCTGGCCAC CAGGATCAGTTATAT TERM 246 208375 - 208358 - R 78 -12.7 -2.63182 | overlap 208356 CTCAATAAACAAAGG GGCCAGC CGAC GCTGGCC ACCAGGATCAGTTAT stiA 208922 - 208383 - | putative fimbrial subunit TERM 247 209263 - 209249 - H 79 -2.8 -5.40072 | TGTCGGCCAAAAAAA CATGCT GAC ATCATG CAGGATTGGAGCTCA yadI 209293 - 209733 + | putative PTS enzyme TERM 248 209915 - 209887 - g 74 -10.4 -3.52909 | gap 1, overlap 209885 GCAAACGACGAAAGA TGCCGCC-ATCTG GTCG CAGATTGGCGACA AAATGGTGACCGTAG yadE 209795 - 211024 + | putative xylanase/chitin deacetylase panD 211411 - 211031 - | aspartate alpha-decarboxylase TERM 249 211474 - 211491 + r 74 -5.5 -4.59109 | overlap 211459 CTGCTTTGGAAATTC TCAGGCA GTAT TGCCCGA TTTTTAACCCCTGTC panC 212360 - 211506 - | pantoate--beta-alanine ligase TERM 250 212085 - 212108 + g 74 -6.7 -4.24711 | TTCCTCAACGGCTGG CGCAAAGAC ATAATC GACTTTGCG TTTGTTCAGCTTTTC TERM 251 212254 - 212294 + g 76 -9.8 -3.78329 | overlap 212254 ACCAGCTTCATATGG C-CGTCGTGCAGGTTGCCCA TGG TGGG-AACCAGTGCGACGCG TTTACCTTCCTGACG TERM 252 212462 - 212450 - R 70 -9.1 -3.30124 | overlap 212452 CTGTAGGCCGGATAA GACGC GTC GCGTC GCCATCCGGCACGGT panB 213277 - 212486 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase folK 213877 - 213398 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 215292 - 213874 - | poly(A) polymerase I TERM 253 214259 - 214274 + g 80 -4.6 -5.02476 | overlap 214260 TCGTAATAGGCCAGA CCGCTC TCCT GAGCGA TTTTTTGCGCCATCT TERM 254 215026 - 215041 + g 73 -5.4 -4.56597 | TGCGTTGGTAGTCAC GTCGAA ATCC TTCGGC TTTTTGCCGAGCAGG yadB 216329 - 215433 - | glutamyl-Q tRNA(Asp) synthetase TERM 255 216368 - 216351 - R 95 -12.7 -4.21772 | opp_overlap 216351 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT TERM 256 216351 - 216368 + r 79 -12.7 -2.80935 | opp_overlap 216351 GGCAATAAAGAATAA GGCGGGA AAAC TCCCGCC TGTCATAAATAGGGT dksA 216853 - 216398 - | DnaK transcriptional regulator DksA sfsA 217734 - 217030 - | sugar fermentation stimulation protein A TERM 257 217218 - 217175 - G 71 -4.4 -4.56597 | gap 1, overlap 217206 CGTGCGGGGGAAAAA CGTGTAATGGCGGAGTGCAGC ACC GC-GAACACCACCACTGCGCG ATGACCTGCCGCCGC TERM 258 217444 - 217461 + g 83 -9.9 -4.09321 | overlap 217429 217428 CGCCAGCGCCGGCAG GCGATTC TCCT GAATCGC TTCTTTCGTTAGCTG ligT 218281 - 217751 - | 2'-5' RNA ligase TERM 259 218967 - 218948 - g 72 -11.4 -3.14132 | TTGCGTTTTGATGAA GCCGTCGC GATG GCGACAGC GGAACTGCTGCGCAA hrpB 218309 - 220783 + | ATP-dependent RNA helicase HrpB TERM 260 220997 - 221017 + G 70 -9.7 -3.44527 | ACAAAAGGTGAGCCG TCGTCGGCA GCA TGACGACGA TTATGATGATGACTA TERM 261 222094 - 222126 + G 71 -8.2 -3.90744 | overlap 222109 222113 222117 ATGACATGCTGAGCG CGCGTCCGCTTGGC GTACA GCCGCGCGGCGGCG TTATTTCACCGCAGC TERM 262 222433 - 222455 + G 79 -12.7 -2.87881 | opp_overlap 222448, overlap 222420 CGCGCCGTTCCATCG GGTCGCTGG CGAAA CCGGCGACC TATCTGACCGCGTTA TERM 263 223050 - 223022 - g 77 -8.2 -4.17309 | gap 1, overlap 223016 223023 GACGACAAACAACAA TGTCGATACCTGG TTTG CC-GGTATCGACG GCAGCCAGGTGACTA TERM 264 223049 - 223023 - g 76 -11.7 -3.09301 | gap 1, overlap 223016 223022 ACGACAAACAACAAT GTCGATACCTGG TTTG CC-GGTATCGAC GGCAGCCAGGTGACT mrcB 220923 - 223445 + | penicillin-binding protein 1b TERM 265 223983 - 223973 - g 74 -2.4 -5.09895 | opp_overlap 223973 CACCTATCGAAAAAA CGCC ACA GTCG GTTTCGGTGGTCACT TERM 266 224606 - 224586 - g 70 -9.7 -3.34398 | overlap 224584 CTGGCTGCCGAAAGA GGGAACGGT TGA ACCGTTACC GAATGGTAAACGCTT fhuA 223738 - 225927 + | ferrichrome outer membrane transporter TERM 267 225936 - 225957 + F 100 -13.7 -4.1466 | overlap 225937 TTTCTAATTTCTTTT TGGGCACGG CTTG CCGTGCCCG TTTTACAAGTTGGCT TERM 268 225937 - 225956 + F 93 -15 -3.08314 | overlap 225936 TTCTAATTTCTTTTT GGGCACGG CTTG CCGTGCCC GTTTTACAAGTTGGC fhuC 225976 - 226773 + | iron-hydroxamate transporter ATP-binding subunit TERM 269 227127 - 227109 - g 82 -11.6 -3.85698 | opp_overlap 227114 227115 227118 CCCTCGCCGGAGAAA CTGGCGCG GAT CGCGCCGG GGCGCGGGTTCGATT TERM 270 227486 - 227466 - g 71 -8.3 -3.91897 | opp_overlap 227469, overlap 227469 CTGGCGATGTATAAA GAAGCGGAT GTG ATCTGCTTC GATCACGGGAATAAC TERM 271 227558 - 227586 + G 74 -8 -4.04174 | overlap 227552 227557 CATGCCGTTTGTCCG CGCCGGGCGCTT TCACC GGGTGCCCGCCG TTTGGTTCTATGGCG fhuD 226773 - 227663 + | iron-hydroxamate transporter substrate-binding subunit TERM 272 228572 - 228590 + G 77 -7.3 -4.33785 | overlap 228557 GCGCGCCTGATGCTG GCGCCGC TCATT GGGGCGC TTATTTTGTGGCTAT TERM 273 229137 - 229152 + G 86 -11.8 -3.85698 | opp_overlap 229136, overlap 229138 TGATTATTATGATAG CCGCCG GGCG CGGCGG TTTCTCGCCGCAACG fhuB 227660 - 229717 + | iron-hydroxamate transporter permease subunit TERM 274 230075 - 230091 + F 93 -12.3 -3.7829 | opp_overlap 230069 230075 CTTTTTAAATATTAA GATGCGG ATG CCGCATC TTTAATGCATCTCGT TERM 275 230091 - 230075 - f 85 -12.3 -3.45571 | opp_overlap 230075, overlap 230069 CTTTTTAAATATTAA GATGCGG ATG CCGCATC TTTAATGCATCTCGT TERM 276 230178 - 230146 - f 100 -12.3 -4.4648 | opp_overlap 230152 ATTTTCATTATAAAA CTTCGATAATAAAAT ATT ATTTTTTTATCGAAG TAATAAAAAACAACT TERM 277 230152 - 230164 + F 85 -3.5 -5.61596 | opp_overlap 230146 ATTATAAAACTTCGA TAATA AAA TATTA TTTTTTTATCGAAGT stfA 230657 - 231217 + | putative fimbrial subunit TERM 278 231256 - 231224 - f 100 -19.3 -3.75629 | overlap 231226 TATCTGTAAGTGAAA TATCATCCTGCGGCA GTC TGCCGCAGGATGATG CTCAAAGTAAAAAAA TERM 279 231254 - 231226 - f 100 -21.9 -3.46068 | overlap 231224 TCTGTAAGTGAAATA TCATCCTGCGGCA GTC TGCCGCAGGATGA TGCTCAAAGTAAAAA TERM 280 233633 - 233604 - g 80 -4.3 -5.03314 | gap 1, opp_overlap 233619 233621 CTCAGCGGTAAAAAA GCCATGGC-CAG TATCCGC CTGCGCGATGGC GGCACGCCGCCCTTC stfC 231303 - 233960 + | putative fimbrial outer membrane usher stfD 233978 - 234730 + | putative periplasmic fimbrial chaperone stfE 234749 - 235261 + | putative minor fimbrial subunit stfF 235258 - 235734 + | putative minor fimbrial subunit stfG 235734 - 236264 + | putative minor fimbrial subunit STM0201 236264 - 237103 + | putative outer membrane protein TERM 281 237184 - 237159 - T 100 -7.6 -6.23209 | gap 2, opp_overlap 237157 TGAACCAAAAAAAAA CCGGGT--GGCG GCTT CGCCTTACCCGG CCTACGTTGTTTCTG hemL 238491 - 237211 - | glutamate-1-semialdehyde aminotransferase TERM 282 237360 - 237350 - G 70 -6.8 -4.1711 | overlap 237321 237358 ATCAGGTGGAAGAAA CGCT TAA AGCG TTCCACGTCGCACGC TERM 283 238860 - 238885 + G 76 -3.3 -4.98531 | gap 1, opp_overlap 238848 238846, overlap 238849 238868 238869 ACATGCGCATTGGCG CGC-TGGTTC AGGTCGC GGACCATGCG TTTTTGCTTTGGCCG TERM 284 238896 - 238906 + G 77 -8.2 -4.13654 | ATGCGTTTTTGCTTT GGCC GCT GGCC TTTATCCTTTCGGCG yadQ 238661 - 240082 + | chloride channel protein TERM 285 240370 - 240356 - g 76 -5.6 -4.68994 | opp_overlap 240356 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGACCCGATG yadR 240164 - 240508 + | iron-sulfur cluster insertion protein ErpA yadS 241232 - 240609 - | hypothetical protein btuF 242069 - 241269 - | vitamin B12-transporter protein BtuF pfs 242760 - 242062 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 286 242804 - 242823 + H 71 -7.9 -3.85698 | GGGCATAGTTTATCA TGCGCTT ATGGGG AAGCGCA TTTCTCAGGCGGGGA TERM 287 243014 - 242999 - g 78 -2.4 -5.14563 | overlap 243000 GTTTGCAGCAAAAAA CGCAGG TTTT CCCGCT GGAGCGCAATGCCGC dgt 242845 - 244362 + | deoxyguanosinetriphosphate triphosphohydrolase htrA 244492 - 245919 + | serine endoprotease TERM 288 245924 - 245958 + F 70 -5.1 -4.52589 | opp_overlap 245923 245948, overlap 245925 245925 TGATGCAGTAATCAC CT-TTGTCCCCCTTCCG CCA TGGAAGGGGG-CAACAC TTTTCTGTGAAACCC TERM 289 245925 - 245956 + F 71 -10.2 -2.58418 | gap 1, opp_overlap 245923 245948, overlap 245925 245924 GATGCAGTAATCACC TTTGTCCCCCTTCCG CCA TGGAAGGGGG-CAAC ACTTTTCTGTGAAAC cdaR 246072 - 247229 + | carbohydrate diacid transcriptional activator CdaR yaeH 247704 - 247318 - | hypothetical protein TERM 290 248051 - 248071 + G 95 -3.1 -5.86061 | TATACGGCCTGGCAA GCGCGCTGG TAT TTGGCCCGC TTTTTTTTCCTGGCG STM0212 247951 - 249252 + | putative inner membrane protein TERM 291 249276 - 249259 - T 72 -8.3 -3.75153 | opp_overlap 249259 249259, overlap 249260 TCGCCGTAATGCAAA GGGGGGC TGTC GCCCCCG CTTTTCACTCGCTTA TERM 292 249259 - 249277 + T 79 -8.1 -4.21275 | gap 1, opp_overlap 249259 249260, overlap 249259 TCGCCGTAATGCAAA G-GGGGGC TGTC GCCCCCGC TTTTCACTCGCTTAA TERM 293 249275 - 249260 - T 77 -11.8 -2.84878 | opp_overlap 249259 249259, overlap 249259 CGCCGTAATGCAAAG GGGGGC TGTC GCCCCC GCTTTTCACTCGCTT dapD 250113 - 249289 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase glnD 252815 - 250143 - | PII uridylyl-transferase TERM 294 252137 - 252154 + g 74 -6.9 -4.3467 | ACGTATGGATATCGC GCAGGCC GCCG GGGCTGC TTTTAATATCCGGCT TERM 295 252446 - 252430 - G 74 -6.5 -4.30987 | opp_overlap 252430 ACGTCCCATAATAAA GTCAGCA GCT CGCCGAC CTTTTGCGCCTGTTC TERM 296 252865 - 252835 - R 100 -16.3 -4.7497 | gap 1, opp_overlap 252830 252829 252845 GCCACCCATTAAAAA GCCGGATAATGGCG TGAA CGCC-TTATCCGGC CTACGTATTTATCTT map 253846 - 253052 - | methionine aminopeptidase TERM 297 253796 - 253806 + g 78 -2.4 -5.15381 | overlap 253793 GGCTGCCAGACGGCC CGCG ACG CGCA TTTTTTCGATGTCTT rpsB 254297 - 255022 + | 30S ribosomal protein S2 TERM 298 255015 - 255003 - f 73 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC CGAGTAATAAGGCTT TERM 299 255196 - 255216 + F 100 -11.1 -4.89729 | overlap 255194 TATCACGTTTGGTTA GGGGGCC TGTATAT GGCCCCC TTTTTCACTTTTATA TERM 300 255452 - 255436 - g 86 -6.5 -5.03747 | AAAGCGGCGAAAAAA GCAGGCA ACG TGGCTGC TGACGGCGTAATCAA TERM 301 255491 - 255476 - g 74 -4.6 -4.72729 | opp_overlap 255476 255477, overlap 255477 TAATCAAAACCAAAA TCGACG GCAA CGTCGC TTTCATTCTGGAAGT TERM 302 255681 - 255703 + G 71 -9.8 -3.47751 | overlap 255690 CATCAACATTCGTCG CGTCGCTTCC CTG GAAGGCGACG TTCTGGGTTCTTACC tsf 255280 - 256131 + | elongation factor Ts TERM 303 256141 - 256162 + F 100 -13.7 -4.61633 | TCCTGATTTTCCTGA GGAGCCGCC TGAG GGCGGCTTC TTTTTGCGCCTCTCT TERM 304 256211 - 256185 - f 76 -8.1 -4.07568 | gap 2, overlap 256188 GCCTCTCTTGTAAAA TCAGC-C-GACGC CTG GCGTCTGCGCTGA AATGCGACGTACAAT TERM 305 256206 - 256188 - f 73 -10.2 -3.08032 | overlap 256185 TCTCTTGTAAAATCA GCCGACGC CTG GCGTCTGC GCTGAAATGCGACGT pyrH 256276 - 257001 + | uridylate kinase frr 257148 - 257705 + | ribosome recycling factor TERM 306 257705 - 257685 - f 76 -8.3 -4.14627 | opp_overlap 257685 257686 257688, overlap 257686 257688 TTGGCAGATAAAGAA GCAGAACTG ATG CAGTTCTGA TTGATCTGTACGCAG TERM 307 257704 - 257686 - f 78 -11.8 -3.08294 | opp_overlap 257685 257686 257688, overlap 257685 257688 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 308 257686 - 257704 + F 76 -11.8 -2.58999 | opp_overlap 257686 257685 257688, overlap 257685 257688 TGGCAGATAAAGAAG CAGAACTG ATG CAGTTCTG ATTGATCTGTACGCA TERM 309 257763 - 257812 + F 100 -16.5 -5.16151 | opp_overlap 257768 257769, overlap 257764 GCGGATGAGTGGTGT ACAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTGC TTTTTATTCCGTTTC TERM 310 257764 - 257811 + F 100 -20 -3.68064 | opp_overlap 257768 257769, overlap 257763 CGGATGAGTGGTGTA CAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTG CTTTTTATTCCGTTT TERM 311 257807 - 257768 - f 95 -12.8 -3.86346 | opp_overlap 257764 257763, overlap 257769 TGAGTGGTGTACAAA GCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGT TTTGCTTTTTATTCC TERM 312 257806 - 257769 - f 93 -16.3 -2.91593 | opp_overlap 257764 257763, overlap 257768 GAGTGGTGTACAAAG CGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCG TTTTGCTTTTTATTC dxr 257846 - 259042 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 313 259110 - 259121 + F 80 -5.8 -4.95854 | overlap 259102 ATATAGTCTGCGCCA CCTG ATCG CAGG TTTTTGGCTTTTTTC TERM 314 259147 - 259164 + F 100 -8.4 -5.28176 | TTTTCGGTCAGGTTA GCCGTG GTTTTA CACGGC TTTTTTGTGGATACA uppS 259355 - 260113 + | undecaprenyl pyrophosphate synthase cdsA 260126 - 260983 + | CDP-diglyceride synthase TERM 315 261284 - 261272 - g 74 -3.3 -4.89477 | opp_overlap 261281 CCTTCAATAACAAAA CGGTG GGC CAGCG CGCCGCAATTATTGC yaeL 260995 - 262347 + | zinc metallopeptidase TERM 316 264042 - 264057 + G 80 -9 -4.12188 | opp_overlap 264041 264042 264054 AGTCGATGGGACAAT CTGCTG ATAC CAGCAG TTTTGCCGCTGATGA yaeT 262379 - 264793 + | outer membrane protein assembly factor YaeT TERM 317 265130 - 265118 - g 77 -7.7 -4.27584 | ATCTGCAATCTAAAA TGCAG CGT CTGCA ATCCATGAAAGCAGG TERM 318 265232 - 265207 - g 72 -3.9 -4.83169 | overlap 265225 265227 ACTTTCGCACAAAAA GCGCAGGCTTT TGAG AAAGATCGCGC TCGTCGTTCCAACGA TERM 319 265378 - 265350 - g 78 -11.8 -3.28924 | overlap 265335 265337 CACCGTTGCTTACAA CAGCAGCGATGT GAAAG ACATCACCGCTG ACGTACTGAAACAGG hlpA 264916 - 265401 + | periplasmic chaperone TERM 320 265483 - 265458 - g 81 -13.3 -2.97245 | opp_overlap 265456, overlap 265453 GGATGCAGAATTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 265405 - 266430 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 321 266459 - 266495 + F 79 -9.4 -4.02005 | gap 1, overlap 266460 AGTTGCCATTCTTTT C-CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCGTG TTATTATTGCCTTTT TERM 322 266460 - 266493 + F 90 -13.1 -3.57992 | overlap 266459 GTTGCCATTCTTTTC CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCG TGTTATTATTGCCTT fabZ 266536 - 266991 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 323 267055 - 267078 + G 72 -3.8 -4.79752 | overlap 267059 GACGGCGCTGTAATT GGCGCTAATG CCCA CATTGGTCCC TTTTGTATTGTTGGG TERM 324 267420 - 267408 - g 70 -9.1 -3.61715 | TATCCTCGCCAACAA CGCCA CGC TGGCG GGGCACGTATCAGTC lpxA 266995 - 267783 + | UDP-N-acetylglucosamine acyltransferase TERM 325 267874 - 267892 + G 73 -5.9 -4.4017 | opp_overlap 267874 267873 267887 TTCGTGCGCTGAAAG CGCGCGT ACCCA ACGCCCG TTTTGTGGGCGTTGC TERM 326 268329 - 268319 - g 72 -2.4 -4.84359 | opp_overlap 268324 268325, overlap 268321 GGACCCGGATAAAAA TGCG GCG CGCG ACGTGCTGGGTATCC TERM 327 268822 - 268791 - g 71 -4.4 -4.66833 | gap 1, overlap 268792 TGCGAACCGCAAAAA CTCGCC-GAAGCG CTGTTGC CGCTACTGGCGAA CGGTAAAACCAGCCA lpxB 267783 - 268931 + | lipid-A-disaccharide synthase rnhB 268928 - 269524 + | ribonuclease HII TERM 328 271525 - 271497 - g 85 -12.6 -3.50572 | gap 1, opp_overlap 271494 271492 AGGGATGGTAGATAA CTTCATCGACCGT AAGC ACGGTCG-TGAAG AACTCTCTTACCCGG dnaE 269548 - 273030 + | DNA polymerase III subunit alpha TERM 329 273196 - 273182 - g 76 -2.8 -5.00616 | overlap 273194 GCCTGCGCGAAAAAA GCGT AGAACTG ACGC GCAAAATCTTCGCCG accA 273043 - 274002 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 330 274026 - 274046 + F 100 -16.9 -5.86061 | opp_overlap 274028 CTCATTTTTCCCCAA GAGGCCGGA TAA TCCGGCCTC TTTTTTTTGGTCGAG TERM 331 274044 - 274028 - f 85 -13.7 -3.01924 | opp_overlap 274026 CATTTTTCCCCAAGA GGCCGGA TAA TCCGGCC TCTTTTTTTTGGTCG TERM 332 274218 - 274199 - g 84 -6.4 -5.0538 | gap 1, overlap 274201 274202 TGGGATTGCAAAAAA CACTGGCGC TCA GCGCC-GTA GCGGCAGGGATCATG TERM 333 274216 - 274201 - g 70 -6.8 -4.15748 | gap 1, overlap 274199 274202 GGATTGCAAAAAACA CTGGCGC TCA GCGCC-G TAGCGGCAGGGATCA TERM 334 274311 - 274296 - g 71 -10.4 -3.25015 | GCCAATGACCATTAA CGCCAG CGAT CTGGCG GCGAAAGAGAAAGCG TERM 335 274808 - 274834 + G 81 -8 -4.33417 | ACGGCGATTTCCTCA GCTATTTTGGCC GCG GGGCAAAACAGC TTTCTTATAACTACA STM0233 274183 - 275946 + | putative endochitinase TERM 336 275956 - 275982 + F 100 -15.2 -3.79849 | opp_overlap 275956 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 337 275982 - 275956 - f 90 -10.8 -4.34263 | opp_overlap 275956 TTGTAATAAGATAAA TCCTGTCGGTGC TTT GCATCGGCAGGA TTGTTACTATGCTTA TERM 338 276165 - 276187 + G 71 -4.9 -4.66609 | gap 1, opp_overlap 276165 276169, overlap 276169 GAAGTTTATTGAACA TAAC-CCGCG CATC TGCGGCGTTA TTTTTGACTGGGATG TERM 339 276509 - 276519 + G 78 -6.8 -4.58242 | opp_overlap 276503 276505 ATCAGAAAAGCCCGC CAGG CTG CCTG TTTTATGACTTTTTT TERM 340 276810 - 276831 + G 72 -12.3 -2.58427 | gap 1, overlap 276809 276811 GCCTCTCTGGTTGAA GCCGACGCGC AAT GCGC-TCGGC ATTCTCGGCGGTATT TERM 341 277743 - 277757 + G 77 -4.2 -4.84761 | overlap 277732 GTTGCCGGATCTGTA TGCGGA AGA TCCGGA TTTTTATCGCAATAT TERM 342 278028 - 278042 + G 79 -7.8 -4.49311 | opp_overlap 278027 GATCACGCAACAGAG TCGGGC CGT GCTCGA TTTTCTGCTGATGCT ldcC 276022 - 278163 + | lysine decarboxylase 2 yaeR 278219 - 278608 + | hypothetical protein TERM 343 279843 - 279812 - g 77 -3.7 -5.04868 | gap 2, opp_overlap 279838 279840, overlap 279814 GTAAATTAAAGAAAA TCTGGCAGGAGCAGG GGAT CCCGC-CCTGGC-GA CGAGATACCACGCCG tilS 278671 - 279963 + | tRNA(Ile)-lysidine synthetase TERM 344 279973 - 280016 + T 81 -13.2 -2.71011 | opp_overlap 280005 280015 GCCTGATGGCGCTGC GCTTATCAGGCCTACGTATC GCAT GGAACGTAGGCCGGATAAGG TGCTTGCACCACCAT rof 280307 - 280047 - | Rho-binding antiterminator yaeP 280512 - 280294 - | hypothetical protein TERM 345 280330 - 280345 + g 86 -10.4 -4.18018 | CACCAGTAAGTTCGC GGCAGC ATAA GCTGCC TTTTCCCTGACCGAC TERM 346 280987 - 280974 - g 81 -8.1 -4.24342 | CGCCGTATTAAGAAA GCCTG TACT CAGGC GAGCGATGTCGCGCT yaeQ 280692 - 281237 + | putative cytoplasmic protein yaeJ 281234 - 281656 + | hypothetical protein TERM 347 282399 - 282419 + T 100 -16.9 -3.74077 | opp_overlap 282399 CACTCACTAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG TERM 348 282419 - 282399 - T 100 -16.9 -4.72497 | opp_overlap 282399 CACTCACTAATAAAA GGCCTCGCA GGG TGCGAGGCC TTTACATATCTGCCG proS 284185 - 282467 - | prolyl-tRNA synthetase TERM 349 282504 - 282523 + g 71 -4.2 -4.58395 | opp_overlap 282496 282504 282520 AGATAATCAACGATA TCGCCGGT TTTA ATCAGCGA TTTTTCACCGCTACG TERM 350 283442 - 283458 + g 74 -10.8 -3.53444 | overlap 283446 AGTCATTTCCTGCGT CGCCGC TGCGC GCGGCG TTTGCGGCGCGATAG TERM 351 284233 - 284215 - R 83 -13.2 -3.13343 | AGTTGAACGATCGAA CAGGCTCA ATG TGAGCCTG ATACAAAAAAAGTGA yaeB 285003 - 284296 - | putative regulatory protein TERM 352 284774 - 284742 - G 91 -9.8 -4.56775 | gap 1, overlap 284768 AGCGCGTGGCAAAAA CGCCCATTC-TGGCG TTAC CGCCAAGACGGGGCG GACGAACTGTCGGCC rcsF 285404 - 285000 - | outer membrane lipoprotein TERM 353 285488 - 285465 - R 88 -14.6 -3.01125 | opp_overlap 285463, overlap 285462 285468 AGCTTGCATAAATGA CAAGACGGGC AATA GCCCGTCCTG AATAATATTACAGAT TERM 354 285485 - 285468 - R 88 -12.7 -3.64915 | opp_overlap 285463, overlap 285465 285462 TTGCATAAATGACAA GACGGGC AATA GCCCGTC CTGAATAATATTACA metQ 286338 - 285523 - | DL-methionine transporter substrate-binding subunit yaeE 287030 - 286377 - | DL-methionine transporter permease subunit TERM 355 286736 - 286726 - G 83 -8.2 -4.38154 | overlap 286698 ATACGGGCGATAAAA GGCG CGG CGCC GACGGTCAGCGGTAC metN 288054 - 287023 - | DL-methionine transporter ATP-binding subunit TERM 356 287344 - 287354 + g 77 -8.2 -4.13767 | CTGAATAAACTTCTG CGCC AGC GGCG TTTTAGGATGCGAGA yaeD 288244 - 288810 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 357 288968 - 288954 - f 76 -4.2 -5.0916 | opp_overlap 288954, overlap 288955 288962 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 358 289000 - 288988 - f 71 -7.7 -4.00532 | overlap 288998 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCAACGGTG TERM 359 291112 - 291075 - f 77 -3.4 -5.14563 | opp_overlap 291077 291105, overlap 291077 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 360 291175 - 291151 - f 71 -8 -3.93061 | gap 1, opp_overlap 291151 291158, overlap 291155 291161 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 361 291729 - 291717 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 362 291781 - 291763 - f 70 -8.8 -3.35798 | overlap 291766 ACCGTGTACGTACAA GCAGTGGG AGC CCCACCAC TAAGCCAGTGGTGAA TERM 363 294938 - 294913 - f 83 -13.3 -3.18264 | opp_overlap 294915, overlap 294915 TCCGCCACTTATTAA GAGCCCTGAGC ATTA GCTCAGGGCTT TTTCTTTCCATGTCA TERM 364 294915 - 294936 + F 100 -15.9 -5.31519 | opp_overlap 294915 294913 CGCCACTTATTAAGA GCCCTGAGC ATTA GCTCAGGGC TTTTTCTTTCCATGT TERM 365 294936 - 294915 - f 100 -15.9 -3.1552 | opp_overlap 294915, overlap 294913 CGCCACTTATTAAGA GCCCTGAGC ATTA GCTCAGGGC TTTTTCTTTCCATGT dkgB 295069 - 295872 + | 2,5-diketo-D-gluconate reductase B TERM 366 295907 - 295924 + T 87 -11.3 -3.97043 | TTTACCCCTCTTTCA CAGCTCC TGCG GGAGCTG TTCTTATATATTCGC yafC 296807 - 295893 - | putative transcriptional regulator STM0257 296912 - 298087 + | putative drug efflux protein TERM 367 298189 - 298170 - f 77 -9.3 -4.00486 | opp_overlap 298173 CCTATAACAGAAGAA CCAGTCC GGTTGA GGACTGG TTGACGTTACAGAGG yafD 298240 - 299019 + | hypothetical protein yafE 299097 - 299867 + | putative methyltransferase TERM 368 299871 - 299905 + T 84 -8.6 -4.72272 | opp_overlap 299878, overlap 299872 299873 299878 AAAGCGGTATAGCAA TTTAAAAGGCGCCG GGGGAAG CGGCGCCTTTTGGC TTTTTCGTCGGACAA TERM 369 299872 - 299904 + T 82 -12.1 -3.43042 | opp_overlap 299878, overlap 299871 299873 299878 AAGCGGTATAGCAAT TTAAAAGGCGCCG GGGGAAG CGGCGCCTTTTGG CTTTTTCGTCGGACA TERM 370 299873 - 299903 + T 81 -13.4 -2.65504 | opp_overlap 299878, overlap 299872 299871 299878 AGCGGTATAGCAATT TAAAAGGCGCCG GGGGAAG CGGCGCCTTTTG GCTTTTTCGTCGGAC TERM 371 299898 - 299878 - T 91 -11.1 -4.31085 | opp_overlap 299873 299872 299871 299878 TATAGCAATTTAAAA GGCGCCG GGGGAAG CGGCGCC TTTTGGCTTTTTCGT TERM 372 299878 - 299898 + T 95 -11.1 -4.49644 | opp_overlap 299878, overlap 299873 299872 299871 TATAGCAATTTAAAA GGCGCCG GGGGAAG CGGCGCC TTTTGGCTTTTTCGT dniR 301290 - 299923 - | membrane-bound lytic murein transglycosylase D TERM 373 300500 - 300551 + g 71 -7.2 -3.9318 | gap 1, overlap 300496 300505 300526 300549 TTTAAACGAACTCGT GCCAGCGCT-CGGCTTTCATCTGTT GTT GGCAGACGTACGCCGTAGCGTTTGC TGTTTTTGAGAATTT TERM 374 300505 - 300546 + g 70 -6.5 -4.13748 | gap 1, overlap 300496 300500 300526 ACGAACTCGTGCCAG CGCT-CGGCTTTCATCTGTT GTT GGCAGACGTACGCCGTAGCG TTTGCTGTTTTTGAG TERM 375 300526 - 300553 + g 71 -4.2 -4.64657 | gap 1, overlap 300505 300500 300549 GCTTTCATCTGTTGT TGGCAGACG-TAC GCC GTAGCGTTTGCTG TTTTTGAGAATTTCA gloB 302117 - 301362 - | hydroxyacylglutathione hydrolase TERM 376 301743 - 301731 - G 70 -6.9 -4.08394 | ACAGCCGCCGGAAAA CAGCG TGT CGCCG CAGAATAAGTAAGGG yafS 302152 - 302874 + | putative SAM-dependent methyltransferase rnhA 303338 - 302871 - | ribonuclease H dnaQ 303402 - 304133 + | DNA polymerase III subunit epsilon TERM 377 304227 - 304208 - T 71 -3.4 -4.90296 | overlap 304210 AAAAGGTGAGAAAAA GCGTTGAC GGGC GACACCGC AAACCGTAATATTCG TERM 378 304391 - 304415 + T 100 -8.6 -5.94597 | opp_overlap 304391 GTGAAGTAAAAAAAA CCGTATCACT GTAAA AGGGATACGG TTTTTTTTCGTCTTC TERM 379 304415 - 304391 - T 100 -8.6 -5.95166 | opp_overlap 304391 GTGAAGTAAAAAAAA CCGTATCACT GTAAA AGGGATACGG TTTTTTTTCGTCTTC STM0266 305720 - 304665 - | putative cytoplasmic protein TERM 380 305064 - 305053 - G 71 -4.4 -4.58395 | CGCAGGCGTGAAAAA TCTG GAGC CAGA TCGCCTAATGTCTCA STM0267 306726 - 305731 - | putative cytoplasmic protein STM0268 308606 - 306723 - | putative cytoplasmic protein STM0269 309116 - 308622 - | putative cytoplasmic protein TERM 381 308923 - 308865 - G 80 -9.4 -4.128 | gap 1, overlap 308866 ATGCTCATACATAAA GCTGCCCGCCAGCGGCGGCAGGCCATA GTTGAG CACTGAC-GCCGCCGCCTGCGGATAGC GCCGGGCGTCGATGT STM0270 309937 - 309113 - | putative cytoplasmic protein STM0271 310826 - 309924 - | putative cytoplasmic protein TERM 382 310908 - 310930 + H 100 -8.4 -5.4593 | opp_overlap 310906 TTAACTAAATTTATA GGGAGTCATT ATT GATGACACCC TTTTTATTATTTTCG TERM 383 310983 - 310995 + H 70 -4.9 -4.49389 | ATAGATGTCTTTTTT GAAAT ATT ATTTC TTTTAATTCTGCAAT STM0272 311194 - 313833 + | putative chaperone ATPase STM0273 313933 - 314475 + | putative cytoplasmic protein STM0274 314499 - 316007 + | putative cytoplasmic protein STM0274A 316070 - 316180 + | invasol SirA STM0275.s 316193 - 316639 + | putative cytoplasmic protein STM0276 316893 - 317378 + | putative cytoplasmic protein TERM 384 317390 - 317414 + F 100 -10.7 -5.10656 | TTAACGGCTGTTTTT CCGGCCAGATG TTA TGTCTGGCTGG TTTTATTGTTTTGAT STM0277 317683 - 318168 + | putative cytoplasmic protein STM0278 318153 - 318536 + | putative periplasmic protein TERM 385 318680 - 318691 + G 77 -4.4 -4.8543 | opp_overlap 318680 AAAGGATAGTAGATA TGTC TTAT GACA TTTTTCTGAAAATTG STM0279 318679 - 319164 + | putative cytoplasmic protein TERM 386 319175 - 319200 + F 100 -17.7 -4.71463 | TTTAACGGCTGTTTT TCCGGCCAGAT TTAT ATCTGGCCGGA TTTATTATTTTGATT TERM 387 319572 - 319558 - g 89 -2.7 -5.47159 | GGCGAAGAGAAAAAA CTGCG TCGCC CGCTG AATGCGCAGACCACG TERM 388 319668 - 319652 - g 75 -6.5 -4.4715 | overlap 319654 GGGTAACCTACAAAA TCCCGGA AGC CCCGGAA AAAGCCTGGTACAGC STM0280 319231 - 319767 + | putative outer membrane lipoprotein STM0281 319771 - 321114 + | putative cytoplasmic protein TERM 389 321143 - 321155 + G 72 -4.1 -4.82901 | overlap 321131 GACGCCGCCAGCGGC GGATA TGA TGTCC TTTTTGTCCACCACG TERM 390 322169 - 322149 - g 71 -6.1 -4.258 | gap 1, overlap 322150 322162 322163 CCAGTGATTAACAAA GCGGCGCG GGAAAT CGC-CCGC GTGGGCGGCGCAGTC STM0282 321111 - 322415 + | hypothetical protein TERM 391 322514 - 322528 + G 100 -5.7 -5.56568 | opp_overlap 322514 CGACATATCACATAA CACGA TCTGT TCGTG TTTTTTTGATCATCT STM0283 322420 - 323193 + | putative inner membrane protein STM0284 323396 - 323827 + | putative Shiga-like toxin A subunit TERM 392 325006 - 324974 - g 100 -13.3 -4.13945 | opp_overlap 325003 AGCCGCAGGCGAAAA GCGGGCGACCCGCAG GCG CTGCACGCCGCCTGC GCGCAGGAGCTGGCG TERM 393 325097 - 325086 - g 74 -7.2 -4.15833 | opp_overlap 325086, overlap 325075 325087 AGTACGACCTTAAAA GCCG CCAG CGGC TGTATACCTTCCCGC TERM 394 325314 - 325302 - g 81 -6.9 -4.82901 | opp_overlap 325310, overlap 325303 TCCGGGCGATAAAAA CCGCC CGT GGCGA ATCCTCCGCCTCTCT TERM 395 326371 - 326359 - g 80 -4.8 -5.06451 | overlap 326360 GAGTACGCCAAAAAA GCTG ACTGA CAGC CTGCGCAGCCAGATA TERM 396 326879 - 326912 + G 100 -18.1 -3.14132 | CTGACCATTGCTGAT AGCGCGCTGGCGGCG GGGA CGTTGCCAGCGCGCA TTACTGCCGCAGACA TERM 397 327026 - 327013 - g 74 -9.5 -3.68023 | overlap 327009 AACGCGCAAAATCAA CGCCG GGAC CGGCG ACGTGCTGAACACCC TERM 398 327220 - 327188 - g 83 -10.6 -4.00042 | gap 2, overlap 327189 TTCTGGAGCAAACAA CTGGCTCCGCTGGCGG ACA CCGCCAGC-GACCC-G TGGCGCTACAAACCG STM0285 323861 - 327730 + | putative inner membrane protein STM0286 327730 - 328518 + | putative cytoplasmic protein STM0287 328515 - 328931 + | putative periplasmic protein STM0288 328955 - 329476 + | putative cytoplasmic protein TERM 399 330102 - 330068 - g 74 -10.6 -3.56092 | overlap 330069 TCAGGACTGGTGAAA GCCGCGGTAGCAGC GGCGCAG GCTGCCGCCGCCGC AGGTATGGCGCAGGA TERM 400 330104 - 330069 - g 72 -12.4 -2.73441 | overlap 330068 CAGGACTGGTGAAAG CCGCGGTAGCAGCGGC GCAG GCTGCCGCCGCCGCAG GTATGGCGCAGGATG TERM 401 331395 - 331384 - g 71 -5.8 -4.34771 | CAAAATGGATGAAAA CAGC TCCT GCTG GATACGCGTCAGCTA TERM 402 331504 - 331486 - g 73 -5.3 -4.62069 | gap 1 GGTGGATTTCAAAAA CGGC-GAT CCGG ATCTGCCG ATCATCGTGGGGCGT STM0289 329873 - 332062 + | putative cytoplasmic protein STM0290 332086 - 332532 + | putative cytoplasmic protein TERM 403 332548 - 332533 - f 73 -7.6 -4.0498 | GATAAAAACGAATAA TCACAC GGAG GTGTGA CCATGTATGAAGCAG TERM 404 333286 - 333308 + G 71 -4.6 -4.56597 | TTCACCCTGCCCGGT CGCCTGCCGG TCA CCTGCTCGCG TTTTTACGCCAGCCA TERM 405 334728 - 334716 - g 73 -10.5 -3.44527 | CACGGATGAGGAGAA GCGCG AGA CGCGC TGGCAGTACACGCCG STM0291 332551 - 336645 + | putative RHS-like protein TERM 406 336907 - 336938 + F 76 -5.2 -4.84311 | gap 1, overlap 336909 GTATTAAATAATAGT TGGCCGGGTAAGA AGTTAAC TCTT-CCCGGCTG TTTTATTATCTAACC TERM 407 336909 - 336936 + F 73 -7.8 -4.03793 | gap 1, overlap 336907 ATTAAATAATAGTTG GCCGGGTAAGA AGTTAAC TCTT-CCCGGC TGTTTTATTATCTAA STM0292 337095 - 337835 + | putative RHS-like protein TERM 408 337995 - 338005 + G 76 -5.4 -4.77567 | opp_overlap 337995 337993 TATCATTAAAACATA GACA ATA TGTC TTTTCTTATACCGAT STM0293 337829 - 338275 + | putative cytoplasmic protein TERM 409 338453 - 338479 + F 74 -11 -2.84234 | overlap 338453 GGTTATAGGGTTTAT GGTTATTTGCTC CTG GAGCAAATAAAC CTTATTACATTGGTA TERM 410 338453 - 338480 + F 83 -10.8 -3.74928 | gap 1, overlap 338453 GGTTATAGGGTTTAT GGTT-ATTTGCTC CTG GAGCAAATAAACC TTATTACATTGGTAT TERM 411 338574 - 338559 - f 75 -3.2 -5.13722 | opp_overlap 338559 338573 GTTATCAAAAGAAAA TGGAAG GATG CTGCCA TTTGATGAAAATGTA TERM 412 338690 - 338669 - f 74 -3.7 -5.07567 | CCATAGGTGAAAAAA TTCCCTCAA CAAA TAGAGAGAA TAAATATAATTCATT STM0294 338838 - 339275 + | putative cytoplasmic protein TERM 413 339291 - 339318 + T 72 -2.7 -5.02606 | gap 1, opp_overlap 339292, overlap 339286 339292 AAATGAAAATAAAAA GCCGGGAAAGAT CTTTT GTCTT-CCCGGA TTTTATTATTTAATC STM0294.1N 339603 - 339328 - | hypothetical protein TERM 414 340340 - 340325 - g 74 -3.2 -4.9138 | AGGATTGAAACAAAA CATCTG GAAC CGGATG AATAATGTGTAAAAG STM0295 340044 - 340352 + | putative cytoplasmic protein TERM 415 340355 - 340379 + F 75 -2.8 -5.21236 | gap 1 GAATAATGTGTAAAA GCCG-GAGGGG TTAT CTTTTCCCGGC TTTTTATTATCAATT TERM 416 340836 - 340851 + G 73 -9 -3.85698 | ACTGTTAAAGATGTC TACCGG GAGG CCGGTA TTTCTGAAGCCACCA STM0297 340755 - 340952 + | putative transposase safA 342209 - 342721 + | putative outer membrane protein safB 342829 - 343542 + | putative fimbrial assembly chaparone safC 343566 - 346076 + | putative fimbrial usher TERM 417 346342 - 346328 - g 74 -7 -4.3129 | GAGCGATGAGCAAAA GGCGGG TAA CACGCC TACCGTATTGCTGCT safD 346098 - 346568 + | putative fimbrial subunit TERM 418 346832 - 346848 + F 78 -12.3 -2.66034 | CACTCTTTTGTGAGC GGGGCTT TAT AAGCCCC TGGTATAAGGTTTGT ybeJ 346974 - 347795 + | putative xylanase/chitin deacetylase sinR 348610 - 349557 + | transcriptional regulator TERM 419 349629 - 349649 + F 73 -7.6 -4.11216 | gap 1, opp_overlap 349616 349612, overlap 349630 GAGGCATCGAGATAT G-CGACTGG TCAG CCAGTCGTC TTTTGACGATGCCCA TERM 420 349630 - 349647 + F 82 -11.3 -3.65542 | opp_overlap 349616 349612, overlap 349629 AGGCATCGAGATATG CGACTGG TCAG CCAGTCG TCTTTTGACGATGCC STM0305 349674 - 349889 + | putative cytoplasmic protein STM0306 350612 - 349893 - | SapA-like protein TERM 421 349969 - 349983 + g 76 -2.8 -5.07053 | TAAGCGGTATGTTCA TCACCA GCA TAGTGA TTTTTTGAAATGCTT TERM 422 350934 - 350911 - R 95 -11.8 -3.87815 | CCCGACCTGGATAAA GCCCGTTATC CCGG AATAACGGGC AAAAATATTTACTCA STM0307 351350 - 350943 - | VirG-like protein TERM 423 351719 - 351692 - R 79 -9.9 -3.66999 | gap 1, opp_overlap 351696, overlap 351695 351696 AGTTACGGAGTGAAA CAATCCCGCCGC GGTGA GCGGCAGG-TTG CTTACAAGGTGAATG TERM 424 351717 - 351695 - R 74 -8.3 -3.9693 | opp_overlap 351696, overlap 351692 351696 TACGGAGTGAAACAA TCCCGCCGC GGTGA GCGGCAGGT TGCTTACAAGGTGAA TERM 425 351696 - 351716 + r 73 -9.6 -3.34344 | opp_overlap 351695 351692 351696 ACGGAGTGAAACAAT CCCGCCGC GGTGA GCGGCAGG TTGCTTACAAGGTGA TERM 426 351716 - 351696 - R 78 -11.8 -2.97676 | opp_overlap 351696, overlap 351695 351692 ACGGAGTGAAACAAT CCCGCCGC GGTGA GCGGCAGG TTGCTTACAAGGTGA yafV 352488 - 351721 - | hypothetical protein TERM 427 352577 - 352560 - R 100 -14.1 -5.08088 | AAGCGGCAAGAAAAA GCCCCGC GAAA GCGGGGC AGGAAAGACACGAGA fadE 355041 - 352597 - | acyl-CoA dehydrogenase TERM 428 354290 - 354270 - G 70 -8.9 -3.64822 | ATTCGCCCATGCAAA CCACGCCGG TAT CCGGAATGG CGCCTGCATCAGAAC TERM 429 354858 - 354828 - G 81 -12.6 -3.03159 | overlap 354817 GGAAGCCGCGGAACA CCGGTGCGGAAATC ATT GATTTTCGCATCGG TGTGAGGTTAAACGG gmhA 355281 - 355859 + | phosphoheptose isomerase TERM 430 356799 - 356778 - g 73 -8.7 -3.91798 | TAACGGGGAATGAAA CCTGGCAAA AGAT TATGCCAGG CGAATGGGCGTTATT yafJ 356072 - 356839 + | putative glutamine amidotransferase yafK 357550 - 356810 - | putative periplasmic protein TERM 431 357549 - 357536 - G 91 -3.8 -5.46657 | opp_overlap 357523, overlap 357523 CATCGCAAGAAAAAA TGCG ATTTTA CGCA TACTGCTTGTTCCTT dinP 357800 - 358855 + | DNA polymerase IV TERM 432 360618 - 360582 - g 91 -9.5 -4.66318 | AGCACGTTAATAAAA CCGACTCGGCA-GTGCG GGCCA CGCACCTGGCGAG-CGG GATTAGCGTGAAGGT prfH 360203 - 360817 + | peptide chain release factor-like protein TERM 433 360935 - 360959 + T 76 -8.5 -4.18763 | overlap 360936 ATATTCCATATTGAT AGCCCGTCC AGAAATG GGACGGGCA TTTTAGCGCTTTCTT TERM 434 360936 - 360958 + T 78 -12 -3.10173 | overlap 360935 TATTCCATATTGATA GCCCGTCC AGAAATG GGACGGGC ATTTTAGCGCTTTCT pepD 362430 - 360973 - | aminoacyl-histidine dipeptidase TERM 435 362154 - 362179 + g 81 -2.5 -5.40072 | GCTGGATAGGATCTG TAGTGAAGTCG TGAA CGGTGTCGCTA TTTTTTTGCGGCACC TERM 436 362411 - 362388 - G 83 -7.6 -4.57837 | gap 1 AGATTTTGGCAAAAA TATC-CCACAA AGG TTGTGGTGATA ACTGAGACAGTTCAG TERM 437 363024 - 363042 + G 73 -10.2 -3.33003 | opp_overlap 363024, overlap 363016 ACGATTTTCGCTAAA CCGGCGGG CCG TCCGCTGG TTGATGATTATGTTA gpt 362679 - 363137 + | xanthine-guanine phosphoribosyltransferase TERM 438 363152 - 363176 + F 100 -17.1 -4.78572 | overlap 363154 ATCAGCAGCTTTTCA GAGCGCCCGGC AAT GCCGGGCGCTG TTTTATTGGTTACAA TERM 439 363154 - 363174 + F 100 -19.7 -4.00694 | overlap 363152 CAGCAGCTTTTCAGA GCGCCCGGC AAT GCCGGGCGC TGTTTTATTGGTTAC TERM 440 363744 - 363774 + G 70 -3 -4.70659 | overlap 363745 ACGTGAAATGGAATT TGCCGTTCCTGGCG GTT CGCCTGTCACCGCG TTTTTACATATGCCG frsA 363226 - 364470 + | fermentation/respiration switch protein crl 364528 - 364929 + | DNA-binding transcriptional regulator Crl phoE 366032 - 364980 - | outer membrane phosphoporin protein E TERM 441 366567 - 366584 + G 71 -6.3 -4.35926 | CAAAGCCGCTTGATT CAACTGT GGGA GCAGTTG TTTTCAATTTACGGT proB 366315 - 367418 + | gamma-glutamyl kinase proA 367430 - 368680 + | gamma-glutamyl phosphate reductase STM0325 369997 - 369197 - | IS3 transposase STM0327 370739 - 371062 + | putative cytoplasmic protein TERM 442 371178 - 371204 + F 77 -11.2 -3.22884 | opp_overlap 371175 TCGTCAAATTAATGT CTATATATTTAT TGA ATAAATATATAG TTCATAACTTACTAC STM0328.s 371304 - 372641 + | putative permease TERM 443 372649 - 372659 + F 72 -3.2 -5.04325 | GTTTCTGATTATAGA CACG AAG TGTG TTTTTATACTTTCCA TERM 444 372928 - 372946 + G 82 -5.3 -5.12971 | gap 1, opp_overlap 372914 AGAACGCGGCCGCAC CGT-TCGG CACC CCGACACG TTTTTATTGAATATT TERM 445 373780 - 373806 + G 70 -3.1 -4.80178 | gap 1, opp_overlap 373787 AACGGCTGGCATGTT GC-TGAAAGATA TTCG TATCTCTCACGC TTTTATTGGTTCATG STM0329 372773 - 374194 + | isopropylmalate isomerase large subunit STM0330 374196 - 374822 + | putative 3-isopropylmalate isomerase TERM 446 375365 - 375352 - g 74 -2.3 -5.0133 | TACGGCTGGAAAAAA CTGGC CTTC GACAG GATCATTCGGTCCGT STM0331 374837 - 375715 + | putative fumarylacetoacetate hydrolase STM0332 375715 - 376629 + | putative hydrolase/acyltransferase TERM 447 376718 - 376690 - gT 100 -5.1 -5.52384 | opp_overlap 376693 376694 376705 376715, overlap 376692 376693 376694 CCTGTAGGAAAAAAA CATCGCCAGCCCC TTG AGGGCTGGCCTTC TGTTGAAGATCTTTT TERM 448 376716 - 376692 - gT 79 -7.7 -4.40552 | opp_overlap 376693 376694 376705 376715, overlap 376690 376693 376694 TGTAGGAAAAAAACA TCGCCAGCCCC TTG AGGGCTGGCCT TCTGTTGAAGATCTT TERM 449 376715 - 376693 - gT 77 -11.2 -3.23247 | opp_overlap 376693 376694 376705, overlap 376692 376690 376694 GTAGGAAAAAAACAT CGCCAGCCCC TTG AGGGCTGGCC TTCTGTTGAAGATCT TERM 450 376693 - 376715 + GT 83 -10.5 -3.67052 | opp_overlap 376693 376692 376690 376694, overlap 376694 376705 GTAGGAAAAAAACAT CGCCAGCCC CTTGA GGGCTGGCC TTCTGTTGAAGATCT TERM 451 376714 - 376694 - gT 86 -14.7 -2.52863 | opp_overlap 376693 376694 376705, overlap 376693 376692 376690 TAGGAAAAAAACATC GCCAGCCCC TTG AGGGCTGGC CTTCTGTTGAAGATC TERM 452 376694 - 376714 + GT 84 -14 -2.79749 | opp_overlap 376694 376693 376692 376690, overlap 376693 376705 TAGGAAAAAAACATC GCCAGCCC CTTGA GGGCTGGC CTTCTGTTGAAGATC TERM 453 376742 - 376763 + GT 73 -10.9 -2.71712 | overlap 376741 ATCTTTTCGTTTTTG TCACCGTTG CTCG CAACGGTGG ATTTGCCCGGGCAGC STM0334 377845 - 377573 - | putative cytoplasmic protein STM0333 376663 - 377628 + | putative transcriptional regulator TERM 454 378322 - 378310 - fH 71 -3.5 -4.83032 | opp_overlap 378310 AGATGAAATAGAAAA TTAAT ATT ATTAA TTAAATGAATATGAA STM0335 378536 - 378934 + | putative outer membrane protein TERM 455 378946 - 378971 + T 77 -10.5 -3.38046 | overlap 378943 378947 CTGAGTCTGGCTTGC CTCAGGGATAC GATC GTATCCCTGAA TATTTCCCATCAAAA TERM 456 378947 - 378970 + T 83 -14 -2.62613 | overlap 378946 378943 TGAGTCTGGCTTGCC TCAGGGATAC GATC GTATCCCTGA ATATTTCCCATCAAA stbE 379739 - 378981 - | putative fimbrial chaparone TERM 457 379499 - 379481 - GT 77 -10.2 -3.38046 | opp_overlap 379491, overlap 379479 GCTGCATTTTAAATA CCGGCGGC AGC GCCACCAG CGGCGTTTTGCTGTT TERM 458 379491 - 379504 + gT 70 -5.2 -4.46656 | opp_overlap 379481 379479, overlap 379500 AAATACCGGCGGCAG CGCC ACCAGC GGCG TTTTGCTGTTATCCG stbD 381030 - 379705 - | putative fimbrial usher TERM 459 380030 - 380052 + gr 85 -12.6 -3.33696 | opp_overlap 380030, overlap 380034 GTTAGCCCCAAGCGA CGCGCCGCCG CCA CGGCGGTGGG TTGATTAACGACAAA TERM 460 380052 - 380030 - GR 70 -10.4 -2.53263 | opp_overlap 380030 380034 GTTAGCCCCAAGCGA CGCGCCGCCG CCA CGGCGGTGGG TTGATTAACGACAAA TERM 461 380034 - 380048 + gr 78 -12.8 -2.60244 | opp_overlap 380030, overlap 380030 GCCCCAAGCGACGCG CCGCCG CCA CGGCGG TGGGTTGATTAACGA stbC 383596 - 381035 - | putative fimbrial usher TERM 462 383126 - 383111 - G 87 -8.2 -4.58395 | opp_overlap 383120 GTTATGGCGTAAAAA CAGCGC CAGC GCGCCG CTATCCCACTCTGAA stbB 384341 - 383580 - | putative fimbrial chaperone TERM 463 384393 - 384368 - R 95 -13.3 -4.19817 | overlap 384369 CCTAGCGATTGAAAA TGGTCTGGCGT TTCA ACGCCAGACCG TAGCGACAATTATTT TERM 464 384392 - 384369 - R 100 -16.8 -3.11569 | overlap 384368 CTAGCGATTGAAAAT GGTCTGGCGT TTCA ACGCCAGACC GTAGCGACAATTATT stbA 384939 - 384403 - | putative fimbrial major subunit TERM 465 385945 - 385928 - gH 100 -6.3 -5.97575 | overlap 385932 AACCTATAAAAAAAA TCACCTC CCTA AAGGTGA GTGATGAAAACGTTA TERM 466 386239 - 386266 + GH 72 -2.2 -4.86001 | gap 1, opp_overlap 386246, overlap 386241 AATGGACGCCATCTT TATT-ATATCAGG GAG CCTAATATGAATA TTTTTCTGCAATGCT STM0341 385573 - 386337 + | putative inner membrane protein STM0342 386310 - 386609 + | putative periplasmic protein TERM 467 387782 - 387793 + G 100 -4.4 -5.74684 | CGTTATCGGCATACT GGTT ACAA AACC TTTTTATTTTTATTC TERM 468 388304 - 388285 - g 72 -2.2 -4.83615 | gap 1, overlap 388265 388286 CAGGTCGCAGAAAAA CTTTCAACG CTC CGT-GAAAA AGGCGTGTTAATAGC STM0343 387109 - 388683 + | hypothetical protein STM0344 388783 - 389526 + | putative response regulator STM0345 389499 - 389987 + | putative inner membrane protein STM0346 390388 - 390912 + | putative outer membrane protein STM0347 391056 - 391697 + | putative response regulator STM0348 391708 - 391932 + | putative inner membrane protein STM0349 391990 - 392349 + | putative outer membrane lipoprotein TERM 469 392420 - 392371 - T 70 -9.7 -3.10344 | opp_overlap 392360 392367 392379 TTTGCAGGTAATATA TGCCTGTTTAGCGCGCGCGCCGC ACTG GCGACGCGGGCGCTATTTGGGCT AACCTTGCTTTTTCT TERM 470 392379 - 392412 + T 100 -18.1 -3.61103 | opp_overlap 392371, overlap 392367 TAATATATGCCTGTT TAGCGCGCGCGCCGC ACTG GCGACGCGGGCGCTA TTTGGGCTAACCTTG STM0350.S 393876 - 392419 - | outer membrane efflux-like protein TERM 471 393209 - 393173 - G 74 -11.5 -3.29511 | opp_overlap 393168 393177 TTGATTTCGGCAGAA CGCAGCGCGATCTCCGC CAT ACGCAGATCGAGCTGTG TGGCGTTACCTGTCC STM0351 397060 - 393893 - | putative cation efflux system protein TERM 472 396282 - 396297 + g 71 -4.6 -4.57837 | opp_overlap 396267 CGCAGACGCGTCACC TCGCCG TCAG CGCCGA TTTTTACCACAATCT TERM 473 396988 - 396977 - G 83 -7.2 -4.59773 | CGGCAGTTTTAAAAA GGCG ATAG CGCC AGCCAGCAGCATTAA STM0352.S 398262 - 397057 - | putative cation efflux pump TERM 474 397513 - 397549 + g 70 -3 -4.82901 | overlap 397498 397514 397517 CTGATAAGGCAGCCC GTTATCGGTGGTTAAC CCCAT GTTGACTACCGGTGGA TTTTTGTCGGAGCGG TERM 475 397821 - 397837 + g 81 -6.5 -4.68593 | GCGCATTACGCGTGG CGGTGAC ATC GTCAGCG TTTTTACGTGATACG TERM 476 398999 - 399017 + G 70 -3 -4.74103 | overlap 399000 TGACCCTGTTGGTGC TGACGATC CCC GGTCGCCG TTTTTACCTTAAAGG TERM 477 399525 - 399499 - g 76 -3.4 -4.99134 | overlap 399500 399501 ACCGTAAACCAAAAA GGCGCGCTCACG CTG CGGGCGACCGCC GTCGGCGGACAGACC STM0353 398560 - 400848 + | putative cation transport ATPase STM0354 400860 - 401324 + | putative transcriptional regulator TERM 478 401583 - 401569 - g 70 -7 -4.07568 | opp_overlap 401556 CGCCGCCCTGCAAAA GGCCGG TTT CCCGCC GCGCGAGAGGTAATC STM0355 401402 - 401596 + | putative copper chaperone TERM 479 401804 - 401784 - f 78 -6.1 -4.60678 | opp_overlap 401786 401787, overlap 401787 CAAAAAGATAACAAA TAAGTAGCG CAA CGCTACCTT GTTACGTCGCTTTGA TERM 480 401801 - 401787 - f 87 -10 -4.34559 | opp_overlap 401786 401787, overlap 401784 AAAGATAACAAATAA GTAGCG CAA CGCTAC CTTGTTACGTCGCTT TERM 481 402671 - 402690 + G 75 -7.1 -4.4009 | opp_overlap 402670 402671, overlap 402673 AATTTTTTATAACAT TGCCGCC ATGCTC GGCGGTA TTTTCTACGGTACGC TERM 482 402745 - 402732 - g 86 -6.7 -5.00884 | ATTGGGCGTAAAAAA GCGAT CATG ATCGC CGCCTTTCTTGCGCT STM0356 401889 - 403142 + | putative inner membrane protein TERM 483 403178 - 403149 - f 72 -10.7 -2.86124 | gap 1, opp_overlap 403146 403168, overlap 403144 403146 CGCACGTAAACACTA CGCTCCTGGCG-CA TAC TGTCGCCGGGAGCA CGCCTTCCTCCCGTC TERM 484 403168 - 403194 + F 73 -7.9 -4.10453 | opp_overlap 403149 403146, overlap 403146 403191 CCTGGCGCATACTGT CGCCGGGAGCA CGCCT TCCTCCCGTCG TTTTCACGCCCTTTC mod 403331 - 405289 + | DNA methylase res 405296 - 408271 + | DNA restriction enzyme TERM 485 408349 - 408321 - f 74 -5.8 -4.60143 | opp_overlap 408321, overlap 408311 408323 ATAGACCATATAAAA TGGCCGCCGCGC AGCGA GCGTTGCGGTCA TTCTCCCTGTGCTAA TERM 486 408321 - 408349 + F 77 -10.2 -3.40299 | opp_overlap 408311 408321 408323 ATAGACCATATAAAA TGGCCGCCGCGC AGCGA GCGTTGCGGTCA TTCTCCCTGTGCTAA STM0359 408548 - 408649 + | putative cytoplasmic protein STM0360 408766 - 410169 + | cytochrome BD2 subunit I TERM 487 410351 - 410367 + G 75 -5.7 -4.59853 | overlap 410357 CGAAACCTGGCTGGT GCTGGGC GGG GCCGGGC TTTTTGGCGCGTTCC STM0361 410166 - 411176 + | cytochrome BD2 subunit II TERM 488 411322 - 411348 + G 100 -18.8 -4.83169 | ACTGATACCCCCGGA CGCGCTTTCGTC GCT GGCGAAAGCGCG TTTTTATCGACAGAT STM0362 411193 - 411417 + | putative cytoplasmic protein TERM 489 412189 - 412158 - g 72 -3.7 -4.74103 | gap 2, opp_overlap 412163, overlap 412159 412160 412184 CCGGCAACGCAAAAA CGCGGGC-TTC-CCG TCAC CGGTGAATACCAGCG GCTGGAGCTCATTCG STM0363 411513 - 412517 + | putative transcriptional regulator TERM 490 413186 - 413170 - g 74 -7.9 -4.08767 | opp_overlap 413159 CTGACGTCGCGAAAA CCGGCGT TTG ATGCCGG AGGAGAAGTGAAGCT TERM 491 414072 - 414048 - g 75 -3.6 -4.84359 | gap 1, opp_overlap 414048 414047 CGATCTCGATAAAAA CAACGTCAGTA CCCG TGCTG-CGTTG CTTTATCTGTTCGAC foxA 412663 - 414771 + | ferrioxamine receptor yahN 415444 - 414812 - | putative transport protein TERM 492 415059 - 415042 - G 76 -2.7 -5.08824 | GCGTTACGGAAAAAA TACTGAT AAAA AACAGTA CGGTTTGCGGATTGG TERM 493 415125 - 415108 - G 74 -2.7 -4.86731 | gap 1 CCCGGCGAAAGAAAA TTGTCCAC GGG GCGG-CAA TCGGCGTCTGGAGCG TERM 494 415309 - 415289 - G 100 -12.5 -4.63932 | opp_overlap 415292 CAGCCCGGAATAAAA GGCGTCTCC CGT GGCGACGCC CAGGCCGGTGATGAC TERM 495 415713 - 415730 + G 71 -8.5 -3.85698 | TGCTTGGCGCATTAG CGTTTGT CGTG ACAAACG TTTATGCCGCAGAAA TERM 496 415775 - 415758 - g 91 -3.5 -5.5943 | gap 1, overlap 415759 415760 415762 AAATCATGAAAAAAA CGGACTTT GAT AAAGTC-G CCTCCGAATACACGA yahO 415676 - 415951 + | hypothetical protein TERM 497 415965 - 416001 + T 83 -13.2 -3.14132 | gap 1, opp_overlap 415971, overlap 415969 415971 AAAAGCATTGCATCA TAAAAATACCCGCCTGG GTTT CC-GGCGGGTATATTTA TTCCTGGCAACCGGC TERM 498 415969 - 415997 + T 87 -9.6 -4.24342 | gap 1, opp_overlap 415971, overlap 415965 415971 GCATTGCATCATAAA AATACCCGCCTGG GTTT CC-GGCGGGTATA TTTATTCCTGGCAAC TERM 499 415995 - 415971 - T 100 -12.2 -4.91511 | gap 1, opp_overlap 415969 415965 415971 ATTGCATCATAAAAA TACCCGCCTGG GTTT CC-GGCGGGTA TATTTATTCCTGGCA TERM 500 415971 - 415995 + T 93 -12.2 -3.72374 | gap 1, opp_overlap 415971, overlap 415969 415965 ATTGCATCATAAAAA TACCCGCCTGG GTTT CC-GGCGGGTA TATTTATTCCTGGCA prpR 417712 - 416087 - | prp operon regulator TERM 501 416336 - 416326 - G 100 -8.2 -5.42259 | CGACGCTTAAAAAAA GCGC CAG GCGC TCCATCATATTACGC TERM 502 416515 - 416471 - G 87 -8.5 -4.57569 | overlap 416472 416496 CGACTGTTTTAAAAA GCTTTCCGCCAGCGGCAAAAT ATC AGCCTGCCGCTCGCGCAAAGG AGGAAGCGTCAGACG TERM 503 416514 - 416472 - G 80 -12 -3.3422 | overlap 416471 416496 GACTGTTTTAAAAAG CTTTCCGCCAGCGGCAAAAT ATC AGCCTGCCGCTCGCGCAAAG GAGGAAGCGTCAGAC TERM 504 416648 - 416665 + g 74 -4.7 -4.7373 | GATCGGCTGGTGTCC GCCGACG CGAG TGACGGC TTTTTCCTCCAGTAC prpB 417977 - 418864 + | 2-methylisocitrate lyase TERM 505 419498 - 419477 - g 71 -10.1 -3.57792 | opp_overlap 419475 GTATTCAGCCGGAAA CCGACGATG ATTC CATCGGCGG CCATTTCCTGCATCT prpC 418987 - 420156 + | methylcitrate synthase TERM 506 421225 - 421201 - g 85 -4.2 -5.28778 | gap 1, opp_overlap 421216 421219, overlap 421215 ATTATCGATAAAAAA GGCCCGCTCAA TAAC CCG-GCGGACC GCGATCACTGTATCC TERM 507 421561 - 421533 - g 76 -10.9 -3.74303 | overlap 421529 421534 AAAATTTAAAATTAA CCTGGCGCGTCAG TTC CCGACTCGCCAGC AGCAACGCATTCTGG TERM 508 421560 - 421534 - g 83 -14.4 -2.82955 | overlap 421533 421529 AAATTTAAAATTAAC CTGGCGCGTCAG TTC CCGACTCGCCAG CAGCAACGCATTCTG prpD 420196 - 421647 + | 2-methylcitrate dehydratase prpE 421688 - 423574 + | propionyl-CoA synthetase TERM 509 423667 - 423649 - T 93 -13.8 -3.5936 | TGTAAAGTCGGGAAA GGGCGGCA GCG CGCCGCCC TGTAACAGAATTAAC hemB 424652 - 423678 - | delta-aminolevulinic acid dehydratase TERM 510 425196 - 425182 - g 73 -5 -4.57569 | GCACTCCTGGAAAAA GAAACT TGT AGTCTC ACAATTAGCATTGGC yaiU 425165 - 428101 + | flagellar protein TERM 511 428168 - 428145 - f 100 -15.4 -4.81851 | opp_overlap 428145 ATTTAAACTGAAAAA TGCCCGTCAA GGAC TTGACGGGCA TTATTGCAAGGAATG TERM 512 428145 - 428168 + F 100 -15.4 -3.61715 | opp_overlap 428145 ATTTAAACTGAAAAA TGCCCGTCAA GGAC TTGACGGGCA TTATTGCAAGGAATG TERM 513 428797 - 428769 - g 70 -5.4 -4.40298 | gap 1 ATTGAAATGAATAAA GGCAAACTGATCA GTAT TAACC-GTTTGCC CTCCGAATATTAACA yaiV 428187 - 428810 + | putative DNA-binding transcriptional regulator TERM 514 428852 - 428817 - T 77 -3.9 -5.19251 | gap 1, overlap 428818 428838 GAATATTAACAAAAA TGTTGCGCCTCGT-CT GATAT AGCGCGAGGCGCGACG ACTCAGGATGCAGGA ampH 429985 - 428855 - | beta-lactamase/D-alanine carboxypeptidase TERM 515 429903 - 429887 - G 70 -5.1 -4.46212 | overlap 429889 GCCGCTACCATAAAA GATATGC TCG GCATAAC GATCAACGATATCAG sbmA 430359 - 431579 + | transport protein TERM 516 432576 - 432558 - g 80 -8.8 -4.13767 | TGGCCGAGGCCAAAA CGGGCAAG ACG CTTGCGCG GGAAATGTTGCCCGG yaiW 431594 - 432688 + | putative outer membrane lipoprotein yaiY 433034 - 432726 - | putative inner membrane protein yaiZ 433302 - 433517 + | putative inner membrane protein TERM 517 433537 - 433506 - T 90 -10.2 -4.21908 | gap 1, overlap 433508 GAGGATGAGGTAAAA GACGCCCGATAAACG TTG CGCT-ATCGGGCGTG CGCTATTACATCGTG TERM 518 433535 - 433508 - T 93 -12.8 -3.70674 | gap 1, overlap 433506 GGATGAGGTAAAAGA CGCCCGATAAACG TTG CGCT-ATCGGGCG TGCGCTATTACATCG ddl 434637 - 433543 - | D-alanyl-alanine synthetase A TERM 519 434701 - 434689 - H 75 -6.2 -4.49311 | overlap 434678 ATTACCACGACAAAA CGCG GGTTT CGCG GGCTTCTGCCATAAT STM0381 434715 - 435428 + | putative inner membrane protein TERM 520 436196 - 436206 + G 74 -4.6 -4.7078 | overlap 436197 AAGCGAACGCCTGAG CGGT AAA GCCG TTTTTGCGTCGTTAC TERM 521 436233 - 436243 + G 76 -3.2 -5.04249 | TTACCTTATCCTGCG CTGG TGA TCAG TTTGTTTTTTACCAC STM0382 435597 - 436808 + | putative permease TERM 522 436816 - 436841 + F 85 -14.1 -3.03781 | overlap 436811 GCCAATAGCGGTGCA TCGTAACGGCG CTTC TGCCGTTACGA TATGGTTTAAATTAA yaiB 437099 - 437365 + | hypothetical protein TERM 523 437474 - 437416 - f 72 -9.3 -3.59252 | gap 2, opp_overlap 437418, overlap 437418 TTTTATGAAATAACA TAGCCGCTTCGTTTTTATTTTCTTCTG GGTAATA CAGAGCAAAATAAAAACGAAGCGGC-- TATGGTAATAACAGT TERM 524 437418 - 437474 + F 100 -23.5 -2.82635 | opp_overlap 437416 437418 TTATGAAATAACATA GCCGCTTCGTTTTTATTTTCTTCTG GGTAATA CAGAGCAAAATAAAAACGAAGCGGC TATGGTAATAACAGT TERM 525 437474 - 437418 - f 100 -21.3 -3.36839 | opp_overlap 437418, overlap 437416 TTATGAAATAACATA GCCGCTTCGTTTTTATTTTCTTCTG GGTAATA CAGAGCAAAATAAAAACGAAGCGGC TATGGTAATAACAGT psiF 437717 - 438037 + | hypothetical protein yaiC 438129 - 439241 + | diguanylate cyclase AdrA proC 440065 - 439256 - | pyrroline-5-carboxylate reductase yaiI 440205 - 440660 + | hypothetical protein TERM 526 440672 - 440662 - f 76 -4 -5.05153 | AGCGTAAAAAATAAA TCAT GTA ATGA AAAATTTACAGTTTA aroL 440845 - 441390 + | shikimate kinase II TERM 527 441483 - 441471 - g 74 -4.7 -4.68593 | GTCACCATTGAAAAA GGCAC GCC GGGCC AGACGGTGACGTGGT yaiA 441417 - 441608 + | hypothetical protein aroM 441859 - 442536 + | hypothetical protein yaiE 442607 - 442891 + | hypothetical protein TERM 528 442896 - 442925 + T 81 -12.9 -2.72344 | gap 1, overlap 442897 GCTATTTGTAACGGT GA-GTCCCCTCTCC GGC GGAGAGGGGCCCTC TGGTTAGCGCTGCGC TERM 529 442897 - 442923 + T 79 -12.2 -2.90723 | overlap 442896 CTATTTGTAACGGTG AGTCCCCTCTCC GGC GGAGAGGGGCCC TCTGGTTAGCGCTGC rdgC 443840 - 442929 - | recombination associated protein TERM 530 443566 - 443578 + g 74 -7.7 -4.14243 | CGTCCCTGATCGGCT TCCAG TTT CTGGA TTTTCGCCTCCAGTG TERM 531 444753 - 444775 + G 77 -4.8 -4.85782 | opp_overlap 444751 444753 AGCGCCTGTACAAGA CGGTTCCGTC GCT GATGAAATCG TTTGTTTTTGGCGGC yajF 443966 - 444874 + | fructokinase araJ 446068 - 444896 - | protein AraJ TERM 532 445108 - 445118 + g 77 -8.2 -4.13767 | overlap 445106 CGCCCAGCAGTTCGC CGCC TTT GGCG TTTTGCAGTAGCAGG TERM 533 445602 - 445592 - G 74 -2.4 -5.1356 | CGCGATCAATAAAAA GGTG TAG CGCC AGCTAAATTCCTGGC TERM 534 446102 - 446088 - R 74 -5.6 -4.64861 | overlap 446089 CCTGCCGAAAATAAA GGCGCA TGT TGCGCG CTGTGGCTGTGAATT TERM 535 446101 - 446089 - R 70 -9.1 -3.38435 | overlap 446088 CTGCCGAAAATAAAG GCGCA TGT TGCGC GCTGTGGCTGTGAAT sbcC 449381 - 446241 - | exonuclease subunit SbcC TERM 536 446556 - 446538 - G 71 -10.2 -3.28712 | TTCGCCGCCTGATAA CGTTCGCG TAT CGCGCACG GCGTCGGCCTGCCAG TERM 537 448540 - 448556 + g 77 -4.4 -4.83615 | gap 1, overlap 448539 GCCAGTGTCAACGCC GCG-AGC TGCG GCTGCGC TTTTTCTCGCGCCTC TERM 538 448660 - 448682 + g 86 -9.9 -4.24075 | gap 1, overlap 448660 AGGTGCTGCTGCTGT C-CCTGCTGG TCGG CCAGCAGGCG TTTCTCTTCGTCAGT sbcD 450580 - 449378 - | exonuclease subunit SbcD TERM 539 450452 - 450436 - G 72 -3.7 -4.73388 | AACCGGTATCAAAAA TATCGCC AGC GACAATA ATGGCATCCACCTGA phoB 450795 - 451484 + | transcriptional regulator PhoB TERM 540 451486 - 451527 + F 100 -15.3 -3.85389 | gap 1 CGACCCGCTTTTAAT GCCTTTTCCGCCAGTAGAAC ACA GGTTT-CTGGCGGAGAAGGC TTTCCATTCTTGAGG TERM 541 451614 - 451630 + G 100 -6.5 -5.69379 | CTCTGTTGCATCCCC GCGCTTA TCC TTAGCGC TTTTTTTGGTTATCT TERM 542 452041 - 452026 - g 74 -4.6 -4.68593 | CCCAGTATTTAAAAA CGCGTG ATTT CACCCG TCCGCTTCATTTGGT phoR 451554 - 452849 + | phosphate regulon sensor protein TERM 543 452876 - 452897 + F 100 -13.1 -4.90525 | opp_overlap 452879 AAGTATAACTTTCCA TAAGCCAGC GGAT GCTGGCTTA TTTTCTTTGCAGTTA TERM 544 452894 - 452879 - f 77 -10.4 -3.31799 | opp_overlap 452876 TATAACTTTCCATAA GCCAGC GGAT GCTGGC TTATTTTCTTTGCAG TERM 545 452922 - 452938 + F 80 -9.5 -3.98747 | CAGTTAAGACGGGCT CGTTGAA ACA TTCAACG TTTGGTGGTTTTTTG TERM 546 453550 - 453575 + G 74 -9.7 -3.61654 | gap 1 TCGGGCCGTTATTTG CGACGCCG-CGT ACC GCGACGGTGTCG TTTGAGGTCGGTATC brnQ 453258 - 454577 + | branched-chain amino acid transporter TERM 547 454599 - 454621 + F 100 -16.3 -5.64304 | opp_overlap 454602 TGACATATGTGTACA CCACGGGGC TTAAC GCCCCGTGG TTTTTTATTGTGTTG TERM 548 454618 - 454602 - f 71 -10.8 -2.63301 | opp_overlap 454599 CATATGTGTACACCA CGGGGC TTAAC GCCCCG TGGTTTTTTATTGTG proY 454652 - 456022 + | putative proline-specific permease TERM 549 456385 - 456342 - g 75 -11.6 -3.36515 | gap 1, overlap 456340 GGCGATGCGCAAACA GCGCCGCCAGCCGCAGCCG GGCGTGA CGGC-GTGGCGAGCGACGC TCAATATCGCGTTAG TERM 550 456769 - 456757 - g 76 -3.3 -5.0538 | opp_overlap 456761 CCGTATCTGAAAAAA CTGGG CGT CACAG CGCTATATCTGAATC TERM 551 457764 - 457741 - g 81 -12.4 -3.57462 | CAGCGTATGGCGAAA CTGCGCCAGA GCAG TCTGGCGCTG CGTCGTGGCGGATGC malZ 456184 - 458001 + | maltodextrin glucosidase TERM 552 458054 - 458037 - T 100 -12.7 -5.28176 | opp_overlap 458037 CTTACGCATAAAAAA GGCTCGC ATTC GCGAGCC TTTTATCAATGCACT TERM 553 458037 - 458054 + T 100 -12.7 -4.42653 | opp_overlap 458037 CTTACGCATAAAAAA GGCTCGC ATTC GCGAGCC TTTTATCAATGCACT STM0402 458675 - 458073 - | putative thiol-alkyl hydroperoxide reductase TERM 554 458792 - 458819 + r 76 -7.8 -4.36914 | TTTTGCCTATCGATC GGGTCATTATAA ATCG TAATGATGACCC TTTTATGACAGCGAA yajB 459466 - 458885 - | acyl carrier protein phosphodiesterase TERM 555 460103 - 460076 - g 76 -5.4 -4.70659 | gap 1, opp_overlap 460080 460091, overlap 460077 460078 GTCTACAGTGAAAAA CCGGGCGCCGTCG CCG CGCCGAC-CGCGG GGCTGCACTTTGATG queA 459560 - 460624 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase tgt 460821 - 461948 + | queuine tRNA-ribosyltransferase yajC 461971 - 462303 + | preprotein translocase subunit YajC TERM 556 462470 - 462440 - g 89 -13.4 -3.53091 | gap 1 ATCCGGCTGTTCAAA TCACTGGCGTGCG CGGCGT CGC-CGCCAGTGA GCAAACGCTGATCCA secD 462331 - 464178 + | preprotein translocase subunit SecD TERM 557 465152 - 465128 - g 76 -5.6 -4.72486 | opp_overlap 465131 465132 CAGAAAGTCGAAAAA GAAGGGGCGG ATCAG CCGTCCATTC TGCCGTAAACACGTA secF 464189 - 465160 + | preprotein translocase subunit SecF TERM 558 465185 - 465204 + F 100 -10 -6.04953 | TAAGTGTTATCTGAA TCCCGGTC ATGC GATCGGGA TTTTTTTATTTATGT STM0409 465308 - 465673 + | hypothetical protein TERM 559 466099 - 466109 + G 74 -8.2 -3.9749 | overlap 466098 GTACATCTCCACATT CGCG CAG CGCG TTTGATCTTATCCAT STM0410 465699 - 466391 + | putative regulatory protein TERM 560 466526 - 466503 - f 79 -8.8 -4.12902 | GAATCATTGCTAAAA GCCCGGCTTC GCGG GAAACTGGGC ATAACCCTTTGTATT yajD 466561 - 466908 + | hypothetical protein TERM 561 466920 - 466906 - T 72 -2.8 -5.06961 | ATGAACAAAAAGAAA TAAGCA GAC TGCTGA CAAAGCTGTTGGTGC TERM 562 467091 - 467110 + T 100 -6.4 -6.20267 | ACATTGTCACTGGAA TCCCGATC GCAA GGTTGGGA TTTTTTTGTTTTTAA TERM 563 467280 - 467239 - T 76 -5.2 -4.78848 | opp_overlap 467242 GCTGGAAAGAGAAAA CCCCCGC-ACATTGTTCGGT ATTC ACCGG-CAACATTACGGGGG CTAACTTGACTCCAG TERM 564 467526 - 467501 - T 72 -8.9 -3.5393 | opp_overlap 467503, overlap 467502 AGCATGCGCCCGAAA CGGGCCAGAGG ACGA CCTCTGGCCTT TTTTGCAGGTTTAGA TERM 565 467525 - 467502 - T 78 -12.4 -2.72144 | opp_overlap 467503, overlap 467501 GCATGCGCCCGAAAC GGGCCAGAGG ACGA CCTCTGGCCT TTTTTGCAGGTTTAG TERM 566 467503 - 467524 + T 100 -15.9 -5.07107 | opp_overlap 467502 467501 CATGCGCCCGAAACG GGCCAGAGG ACGA CCTCTGGCC TTTTTTGCAGGTTTA tsx 468400 - 467537 - | nucleoside channel TERM 567 468453 - 468443 - R 74 -6.8 -4.21812 | opp_overlap 468443 CGGGAGTGAAAAGAA CGCA ATT TGCG TTTCTAAATATTTCG yajI 469239 - 468700 - | hypothetical protein ybaD 469391 - 469840 + | transcriptional regulator NrdR TERM 568 470053 - 470030 - g 70 -6.6 -4.07687 | opp_overlap 470036, overlap 470036 470037 ATGGCGGGCGCAAAA GCCAAAGGCG CAAC CGCCTATGTC ACGCTTGAACCCTGT TERM 569 470047 - 470036 - g 71 -7.2 -3.92659 | opp_overlap 470036, overlap 470030 470037 GGCGCAAAAGCCAAA GGCG CAAC CGCC TATGTCACGCTTGAA ribD 469844 - 470947 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 570 471460 - 471444 - g 74 -7.9 -4.17132 | overlap 471445 471453 AAAGCCGGTAATAAA GGCGCAG AAG CTGCGCT GACCGCGCTTGAAAT TERM 571 471459 - 471445 - g 72 -11.4 -3.09556 | overlap 471444 471453 AAGCCGGTAATAAAG GCGCAG AAG CTGCGC TGACCGCGCTTGAAA ribH 471036 - 471506 + | riboflavin synthase subunit beta nusB 471527 - 471946 + | transcription antitermination protein NusB TERM 572 471953 - 471995 + F 88 -5.6 -5.61277 | gap 2, opp_overlap 471962 471966, overlap 471983 AAAAAGTGATTCACA GGCCGGAAAGATAGCGGG CGCTCGATA CCCGCCGTCT--CCGGCC TTTTCTTTTTTTCTG thiL 472025 - 473002 + | thiamine monophosphate kinase pgpA 472980 - 473495 + | phosphatidylglycerophosphatase A yajO 474573 - 473599 - | putative oxidoreductase TERM 573 474036 - 474057 + g 76 -5.2 -4.82901 | gap 1, opp_overlap 474040, overlap 474040 GATCCTGCATGGTGA CAA-ACGGC GCCCA GCCGTGTTG TTTTTGTAGCGCCAG TERM 574 474361 - 474347 - G 74 -7.8 -4.07568 | TCGCGCCGGGCAAAA TCACGC AGC GCGCGA CCGACAATCTCTTCG dxs 476492 - 474630 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 575 474803 - 474816 + g 73 -5.2 -4.63932 | CGCCGCTGCCAGCGC CGCC CATAAT GGCG TTTTCTTCCAGCGTC TERM 576 476063 - 476013 - G 71 -9.8 -3.54543 | gap 3, opp_overlap 476012 476010 476013 476060 ATTCATTGCTTCAAA CGCCATACCGGC-G-GTGA-TGGCG CCGT CGCCAATCACACAGACGGTGCGGCG ATCTTTGCCTTCTTT ispA 477415 - 476516 - | geranyltranstransferase TERM 577 476851 - 476870 + g 71 -12.1 -2.53271 | overlap 476850 476849 CGCCAAGTCTAACGG CGGCGCG AATGAG CGCGCCG GTCTTATGGCGATGA xseB 477658 - 477416 - | exodeoxyribonuclease VII small subunit TERM 578 478051 - 478041 - g 75 -6.8 -4.49756 | opp_overlap 478041, overlap 478044 CGCCAAAGATGAAAA CCAG CGT CTGG TGATTCGCGACGCGC TERM 579 478976 - 478946 - g 73 -6.2 -4.37711 | opp_overlap 478944 478946 478947, overlap 478939 478947 CCATTAAAGCGAAAA TTGAAGCCGAAG AAGAAAA CTTCGACTTCAG TATTCTCGATAAGGT thiI 477868 - 479316 + | thiamine biosynthesis protein ThiI phnV 480157 - 479360 - | 2-aminoethylphosphonate transporter phnU 481020 - 480160 - | 2-aminoethylphosphonate transporter phnT 482132 - 481023 - | 2-aminoethylphosphonate transporter phnS 483151 - 482138 - | 2-aminoethylphosphonate transporter TERM 580 482414 - 482434 + g 93 -12.5 -4.05446 | opp_overlap 482413 482410 AATGACATAAGGGAT GGCCAGCGC GCT GCGCTCGCC TTTGTCGTTGGCCGG phnR 484068 - 483349 - | 2-aminoethylphosphonate transport protein TERM 581 483483 - 483453 - G 84 -13.2 -3.1372 | overlap 483451 483474 GACGGCGCAGCAACA GCGCCGGGCGCCCT TCC ATAACGCCCAGCGC CTGTGCGGCCTGCGC TERM 582 483752 - 483767 + g 75 -6 -4.65895 | opp_overlap 483750, overlap 483750 ACGGTGGTTAACACG CCGCTC AGTA GCGCGG TTTTTGGCTCCCGCC phnW 484208 - 485311 + | 2-aminoethylphosphonate--pyruvate transaminase phnX 485318 - 486130 + | phosphonoacetaldehyde hydrolase TERM 583 486153 - 486200 + T 88 -12.2 -3.53444 | gap 1, overlap 486154 486155 GCCGGATGGCGCTGT CG-CTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGGTG TTTACGCCGCCATCC TERM 584 486154 - 486198 + T 90 -13.7 -3.34517 | overlap 486153 486155 CCGGATGGCGCTGTC GCTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGG TGTTTACGCCGCCAT TERM 585 486155 - 486197 + T 100 -17.2 -2.60496 | overlap 486154 486153 CGGATGGCGCTGTCG CTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAG GTGTTTACGCCGCCA thiJ 486817 - 486227 - | hypothetical protein apbA 487691 - 486780 - | 2-dehydropantoate 2-reductase yajQ 487817 - 488308 + | nucleotide-binding protein yajR 489719 - 488355 - | putative transport protein TERM 586 489680 - 489703 + g 70 -5.3 -4.51097 | gap 1 TCCCTAAACCCCATG TGGCGCGCAG CTCCC CTG-GCGTCA TTTTATAATCGTTCA TERM 587 490750 - 490760 + G 91 -2.4 -5.76949 | AAATAATAGACCCGA GAGC GAT GCGC TTTTTTTTAGCCGTA TERM 588 490969 - 490955 - g 73 -5.6 -4.56597 | opp_overlap 490942 GCCGCCGCGGAAAAA GGCGTC GTT GAGGCC CAATCTCTCTTGGGG TERM 589 491414 - 491399 - g 91 -7.6 -5.055 | GTAACCCTGAAAAAA GAGAGA ATTT TCTCTC GCGGGATAACGGCTA STM0437 490256 - 491767 + | putative periplasmic protein STM0438 491989 - 493272 + | TPR repeat-containing protein TERM 590 493312 - 493332 + T 100 -11.1 -5.08824 | opp_overlap 493312 AAATGGATAAAAAAA CCGCCGTTT GTG ACACGGCGG TTTTTTCAATAGCAA TERM 591 493332 - 493312 - T 100 -11.1 -5.68039 | opp_overlap 493312 AAATGGATAAAAAAA CCGCCGTTT GTG ACACGGCGG TTTTTTCAATAGCAA cyoE 494244 - 493354 - | protoheme IX farnesyltransferase cyoD 494585 - 494256 - | cytochrome o ubiquinol oxidase subunit IV TERM 592 494369 - 494340 - G 74 -10.1 -3.62572 | opp_overlap 494366 GATCAGCACGGTAAA GATGAAGGCCG TCATGTTC CAGCCTTCATC AGATTTGGTGTTCAT cyoC 495199 - 494585 - | cytochrome o ubiquinol oxidase subunit III cyoB 497180 - 495189 - | cytochrome o ubiquinol oxidase subunit I TERM 593 495234 - 495245 + g 75 -5.8 -4.66833 | opp_overlap 495233 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGACTTCCGG TERM 594 497119 - 497078 - G 95 -14.5 -3.46081 | opp_overlap 497078, overlap 497112 TACCGAAGTAAGTAA TCGCTGCCAGTATCGCCAG TCCC CCGACGATAATTGCAGCGA TCGTTACCATGACGA cyoA 498147 - 497191 - | cytochrome o ubiquinol oxidase subunit II TERM 595 497682 - 497667 - G 95 -11.8 -4.42806 | opp_overlap 497676 TCACTTTGAAATAAA CCGGCG TGTT CGCCGG GAAGGCGATCTCGTT TERM 596 497759 - 497772 + g 70 -3.1 -4.77036 | opp_overlap 497754, overlap 497760 TCCATGGAAACCACT TCGAT GGTG ATCGG TTTTTCGTCATGCGC ampG 500075 - 498600 - | muropeptide transporter TERM 597 498669 - 498656 - G 71 -8.1 -3.81755 | ACCCGCCAAAGACAA TGCCG CACA CGGCA ACCACTACCGCAGTC TERM 598 499119 - 499131 + g 74 -3.4 -4.88736 | AAAGACCGCCGCGCC CATG CTGAA CATG TTTTTATCGGTAATG TERM 599 499441 - 499426 - G 73 -6.1 -4.42806 | opp_overlap 499435 TTACGGCCAAAGAAA TCGCG TAGCGG CGCGA CGACGGCCTGTTCCA TERM 600 500087 - 500106 + r 100 -15 -4.03167 | opp_overlap 500089 ACATAGGCATCTACA GACCCGGC TTCT GCCGGGTC TTGTTGTTGCTATTA TERM 601 500104 - 500089 - R 77 -11.8 -2.92091 | opp_overlap 500087 ATAGGCATCTACAGA CCCGGC TTCT GCCGGG TCTTGTTGTTGCTAT yajG 500697 - 500119 - | hypothetical protein TERM 602 501135 - 501155 + G 86 -7.5 -4.73613 | overlap 501130 GGTCGTGCTGGTGAG CGATCGCTT TAC AGGCGAACG TTTTCTTAATCGTCA bolA 501001 - 501318 + | transcriptional regulator BolA TERM 603 501374 - 501397 + F 93 -9.6 -4.59984 | opp_overlap 501379, overlap 501379 GCTACAGAATTATGT GAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGAATTTT TERM 604 501379 - 501392 + F 100 -9.5 -5.23292 | opp_overlap 501379, overlap 501374 AGAATTATGTGAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGA TERM 605 501392 - 501379 - f 83 -9.5 -4.17425 | opp_overlap 501379 501374 AGAATTATGTGAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGA tig 501665 - 502963 + | trigger factor TERM 606 503020 - 502999 - f 100 -12.3 -4.86033 | opp_overlap 502999 AAATTTGCACAAAAA CCCGTCACC TTTC AGTGACGGG TTTTTTTTGTCACGT TERM 607 502999 - 503020 + F 100 -11.6 -5.94713 | opp_overlap 502999 AAATTTGCACAAAAA CCCGTCAC CTTTCA GTGACGGG TTTTTTTTGTCACGT clpP 503210 - 503833 + | ATP-dependent Clp protease proteolytic subunit clpX 504085 - 505356 + | ATP-dependent protease ATP-binding subunit TERM 608 505384 - 505412 + F 80 -6.7 -4.8048 | opp_overlap 505389, overlap 505389 ACAATCAGTTAGCCA AAAAAGGGGGGAT TTT ATCTCCCCTTTCG TTTTTCCTGTAAACA TERM 609 505389 - 505407 + F 91 -11 -4.3623 | opp_overlap 505389, overlap 505384 CAGTTAGCCAAAAAA GGGGGGAT TTT ATCTCCCC TTTCGTTTTTCCTGT TERM 610 505407 - 505389 - f 100 -8.8 -5.09895 | opp_overlap 505389 505384 CAGTTAGCCAAAAAA GGGGGGAT TTT ATCTCCCC TTTCGTTTTTCCTGT TERM 611 505711 - 505690 - g 89 -2.9 -5.67967 | overlap 505693 ACCATGATAAAAAAA TCATGCTGG TCGC CCAGAAGGA AGCATCGACGGATGA TERM 612 505994 - 505984 - g 100 -5.4 -5.80364 | overlap 505985 AGCTGAACAAAAAAA TTCC GCC GGAA GTGCTGACGTCACTC TERM 613 506488 - 506475 - g 76 -3.1 -5.10029 | gap 1, overlap 506465 506477 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTCGA TERM 614 506493 - 506477 - g 80 -9.4 -4.17355 | overlap 506465 506475 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTCGATACTG TERM 615 507537 - 507525 - g 70 -3.3 -4.72986 | GACTTTTACGAAAAA CGCGA TAT CCACG TTCACGTGCCGGAAG lon 505542 - 507896 + | DNA-binding ATP-dependent protease La TERM 616 507929 - 507958 + F 100 -8.6 -5.72616 | gap 1, opp_overlap 507928 507929 CGCTAATAAAAACAG GGCTGGCAGG-CT ATTTC GGACTTGCCAGCC TTTTTTTGTATAGCT hupB 508105 - 508377 + | transcriptional regulator HU subunit beta TERM 617 508413 - 508432 + F 100 -10 -5.45652 | opp_overlap 508412 508413 GTGACAAAGTACAAG GGCGCATC AACT GATGTGCC TTTTTTATTGGCGAT TERM 618 509567 - 509549 - g 76 -11.8 -3.07947 | overlap 509541 509540 GAACAAGGGCGAAGA TTTCGCCA CGC TGGCGAAA GAGAAATCTACCGAT TERM 619 509688 - 509673 - g 93 -4.6 -5.50723 | opp_overlap 509673, overlap 509674 GGATTAAAAGAAAAA GGCCAG ATAT CTGGCG TGATTAAGTCGTCTG TERM 620 509687 - 509674 - g 71 -8.1 -3.88807 | opp_overlap 509673, overlap 509673 GATTAAAAGAAAAAG GCCAG ATAT CTGGC GTGATTAAGTCGTCT TERM 621 510447 - 510426 - g 90 -5.1 -5.27923 | gap 1 GAAGCGCAGAAAAAA GCGATGGTGC AGG GCATCA-CGC AGAACAATGCGCAAA cypD 508668 - 510539 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 622 510586 - 510601 + F 100 -11.8 -4.39571 | opp_overlap 510586 GTTGTATCCCACAAA GGCCGC TTTC GCGGCC TTTTCCATTTCTGAG TERM 623 510601 - 510586 - f 95 -11.8 -3.89346 | opp_overlap 510586 GTTGTATCCCACAAA GGCCGC TTTC GCGGCC TTTTCCATTTCTGAG ybaV 510688 - 511062 + | putative DNA uptake protein TERM 624 511098 - 511120 + F 73 -10.7 -3.00601 | overlap 511093 511100 ATTTGCCAGACTGTA GAGGTCATA CCAGT TATGACCTC TGTACTTGTCGTTTA TERM 625 511456 - 511480 + G 70 -2.7 -4.69415 | overlap 511457 GGAGCCAGAAGGGCA GGTGGTGGCCG ATG CGCTCATCACG TTTGTTTGTATTGAT ybaW 511166 - 511564 + | putative esterase ybaX 512365 - 511670 - | queuosine biosynthesis protein QueC ybaE 514130 - 512430 - | putative ABC transporter periplasmic binding protein TERM 626 513692 - 513680 - G 76 -3.3 -5.055 | TTAACCCGGAAAAAA CTTGC CCT GCGAG ATGCTGTTCCGCGCG TERM 627 514139 - 514149 + H 74 -5.4 -4.68545 | GCCTCATAGAAACCC GGAA CAC TTCC TTTTATCTGTTCACT cof 514231 - 515049 + | putative hydrolase TERM 628 515085 - 515067 - T 74 -10.3 -3.14344 | opp_overlap 515067 GATCTCTTCCAGCAA GCCAGAC ATTCA GTCTGGC TTTTTTTTGGTTTCT TERM 629 515067 - 515085 + T 100 -10.3 -6.0458 | opp_overlap 515067 GATCTCTTCCAGCAA GCCAGAC ATTCA GTCTGGC TTTTTTTTGGTTTCT STM0458 516154 - 515099 - | putative cysteine synthase/cystathionine beta-synthase TERM 630 515800 - 515827 + g 86 -10.8 -4.13767 | AATGACAGTGGCCGC CGTAAAATTGAA TCTG TTCGATTTTACG TTTTGCGGTACAGGC ybaO 516267 - 516725 + | putative transcriptional regulator TERM 631 517483 - 517467 - g 86 -6.5 -5.07486 | opp_overlap 517471 517476 517477, overlap 517470 TACCGGCAAGAAAAA TATGCGC GTG GCGCGTA TTGACGCGCGTTTTG TERM 632 517476 - 517493 + G 74 -6.9 -4.25283 | opp_overlap 517470 517467, overlap 517471 517477 GAAAAATATGCGCGT GGCGCGT ATTG ACGCGCG TTTTGATCCAACCAT TERM 633 517993 - 518022 + G 79 -3.3 -5.18726 | overlap 517994 CTGGATAGCTGGCGT AGCCGACTGGCGG TTGT CAGCCAGACGCCG TTTTTGTTCTCGGAC mdlA 516766 - 518538 + | putative multidrug transporter membrane\ATP-binding components TERM 634 518688 - 518703 + G 70 -9 -3.66178 | opp_overlap 518688 518686 ATTTCATTGATAACA TGGTGG CCCG CCACCA TTTACCGTTGGGCAA mdlB 518531 - 520312 + | putative multidrug transporter membrane\ATP-binding components TERM 635 520347 - 520363 + TF 89 -6.5 -5.31519 | overlap 520348 AAACCTCGCCCATCA TGCACCG TCG TGGTGCG TTTTTCTTTCCCTGT STM0461.1n 520919 - 520344 - | hypothetical protein TERM 636 520409 - 520423 + gF 81 -8.5 -4.2828 | opp_overlap 520408 520406 520409 CGTCAATATAAAGAC GCGCG CTAAC CGCGC TTTTCCTCGCTCGCC glnK 520524 - 520862 + | nitrogen regulatory protein P-II 2 TERM 637 521661 - 521682 + Gr 73 -11.5 -2.6006 | opp_overlap 521660, overlap 521660 521675 GGCCTTTGTGAACAC CGTGGTGGC GACC GCCGCCGCG ATTCTGGGGTGGATT amtB 520894 - 522180 + | ammonium transporter TERM 638 522257 - 522275 + Tr 83 -4.4 -5.33848 | opp_overlap 522237 522259 522260, overlap 522259 522260 CGTCATCAGGCCATT AACGCCGC ATA GCGGCATG TTTTTTAATTGTGAT TERM 639 522259 - 522273 + Tr 74 -7 -4.29187 | opp_overlap 522237 522259 522260, overlap 522257 522260 TCATCAGGCCATTAA CGCCGC ATA GCGGCA TGTTTTTTAATTGTG TERM 640 522272 - 522260 - TR 70 -10.5 -2.50113 | opp_overlap 522259 522257 522260, overlap 522237 522259 CATCAGGCCATTAAC GCCGC ATA GCGGC ATGTTTTTTAATTGT TERM 641 522260 - 522272 + Tr 74 -10.5 -3.15885 | opp_overlap 522237 522260 522259, overlap 522259 522257 CATCAGGCCATTAAC GCCGC ATA GCGGC ATGTTTTTTAATTGT tesB 523140 - 522280 - | acyl-CoA thioesterase II TERM 642 522738 - 522782 + g 90 -5.1 -5.27779 | gap 1, overlap 522742 GCGATTGCGCGATTT CCGTTTCTGACGGTAGTC CTTCCGGCCC GACTACCGTCGGCA-TGG TTTTTTGATGTTCAA TERM 643 523239 - 523225 - H 72 -5.7 -4.38712 | CCGATGGGTACAAAA GTCTG AATAA CAGAC CAATTCCAGGCAAAA ybaY 523355 - 523924 + | hypothetical protein TERM 644 523936 - 523956 + T 100 -16.9 -3.14132 | opp_overlap 523926 523925 TTAATCCTGCGCCAA CCCTCTCCG TTA CGGAGAGGG TTAATACACCCAGCG ybaZ 524346 - 523957 - | putative methyltransferase ylaB 526127 - 524577 - | hypothetical protein TERM 645 525120 - 525145 + g 80 -8.9 -4.15044 | GGTGTCGATGATTAG CCGGGTTAGCG GCTC CGTGAGCCCGG TTTGTTCAGCCAGCG TERM 646 525181 - 525170 - G 74 -3 -4.84359 | opp_overlap 525175 CCAGCGCGATAAAAA TTTC CGGC GAAA GGAAGGTGCCGTCCG rpmE2 526352 - 526612 + | 50S ribosomal protein L31 type B rpmJ 526618 - 526758 + | 50S ribosomal protein L36 TERM 647 526783 - 526806 + T 100 -10.3 -5.4505 | opp_overlap 526783 AGTTCAGGGAAAGCA GTGCGTACC AGGGAG GGTGCGCAC TTTTTTATTACCGGC ylaC 527284 - 526814 - | putative inner membrane protein maa 527952 - 527401 - | maltose O-acetyltransferase TERM 648 527897 - 527930 + g 100 -3.8 -5.95286 | overlap 527900 TCCTGGCATAAAGTT TCATCGGTCGGGCA ATACAG TGCCCCAGCGATCA TTTTTTGTTTTTCGT hha 528349 - 528131 - | hemolysin expression-modulating protein ybaJ 528751 - 528377 - | hypothetical protein TERM 649 529228 - 529213 - R 100 -11.8 -5.00616 | opp_overlap 529213 TTTTTGCGTAAAAAA GGCCGC TTGC GCGGCC TTATCAACAGTGAGC TERM 650 529213 - 529228 + r 82 -11.8 -3.30124 | opp_overlap 529213 TTTTTGCGTAAAAAA GGCCGC TTGC GCGGCC TTATCAACAGTGAGC acrB 532396 - 529247 - | acridine efflux pump TERM 651 530177 - 530191 + g 76 -5.6 -4.77438 | opp_overlap 530176 GTCGCTAATAGATAC GCCCAG CGC CTGAGC TTTTTCCTGGTCGAT TERM 652 532270 - 532309 + g 74 -10.8 -3.57144 | overlap 532271 TTGCGGAGATCGTCA CTGCTGGTGGCGCAAT CGTCGGAT ATTGCGCTACCGGCAA TTTGAGGATCGCGAG TERM 653 532271 - 532308 + g 83 -14.3 -2.74144 | overlap 532270 TGCGGAGATCGTCAC TGCTGGTGGCGCAAT CGTCGGAT ATTGCGCTACCGGCA ATTTGAGGATCGCGA acrA 533612 - 532419 - | acridine efflux pump TERM 654 533583 - 533601 + g 90 -6 -5.17744 | opp_overlap 533579 CATCAGAACGACCGC CAGAGG CGTTAAC CCTCTG TTTTTGTTCATATGT TERM 655 534344 - 534324 - g 70 -3.1 -4.8236 | overlap 534326 GATTTAAAAAAAGAA GCTCGCGCC TAC GTCACGATC CTGCTGGAGATGTAT acrR 533754 - 534407 + | DNA-binding transcriptional repressor AcrR TERM 656 534413 - 534433 + F 72 -4.8 -4.61868 | gap 1, opp_overlap 534413 534411 534414, overlap 534413 534414 CTCCCCCTGATAATA T-TCCAGGA AAAC TCCTGGACA TTTTCTGTGTCGCTA TERM 657 535342 - 535328 - g 90 -5.6 -5.15969 | opp_overlap 535328 535329, overlap 535329 CGCTAACGGAAAAAA CGGCCC AGG AGGCCA TTTCGCCGGACGAAA TERM 658 535827 - 535810 - g 70 -5.5 -4.47183 | GATCAGCTAAATAAA CAGTTGG GTAA CCAGCTG ATGATGGCGATTAAC TERM 659 536357 - 536369 + G 84 -9.1 -4.34402 | opp_overlap 536353 536352, overlap 536354 TGGAAAAAGAGGGCG TGGCG ATA CGCCA TTTTGGTATGCCGGC aefA 534526 - 537888 + | potassium efflux protein KefA STM0479 538865 - 537930 - | putative transposase TERM 660 538046 - 538073 + g 91 -9.8 -4.57341 | overlap 538038 538069 538070 GCGCTTCGGCCTCAC GGCCTTGTGCTA ACCC TTGCTCAAGGCC TTTTTGCAGGCCCTT TERM 661 538188 - 538206 + g 71 -8 -3.8901 | opp_overlap 538187 CAGTTGACGAATTAG CGCCCCGG GTT CTGCGGCG TTTCCTGCTTTCAAC ybaM 539102 - 538935 - | hypothetical protein priC 539631 - 539116 - | primosomal replication protein N'' ybaN 539712 - 540089 + | hypothetical protein TERM 662 540094 - 540083 - f 71 -3.6 -4.89562 | TGAAAAGCAACAAAA GCGC TGAA GCAC ACGAATCGCTGTTGC apt 540242 - 540793 + | adenine phosphoribosyltransferase TERM 663 540854 - 540830 - f 88 -14.3 -3.0094 | opp_overlap 540830 540833, overlap 540833 TTTTAGCCAGAGAGA CAACCTCGCTG TAT CGGCGAGGTTG TGTTAGCATTACCCT TERM 664 540830 - 540854 + F 100 -16.5 -3.09671 | opp_overlap 540830 540833, overlap 540833 TTTTAGCCAGAGAGA CAACCTCGCTG TAT CGGCGAGGTTG TGTTAGCATTACCCT TERM 665 540833 - 540851 + F 93 -12.4 -3.69069 | opp_overlap 540833 540830, overlap 540830 TAGCCAGAGAGACAA CCTCGCTG TAT CGGCGAGG TTGTGTTAGCATTAC TERM 666 540851 - 540833 - f 79 -10.2 -3.64912 | opp_overlap 540830 540833, overlap 540830 TAGCCAGAGAGACAA CCTCGCTG TAT CGGCGAGG TTGTGTTAGCATTAC TERM 667 542227 - 542200 - g 75 -11.2 -3.37016 | gap 1, opp_overlap 542202, overlap 542195 ACAAAAAAGAGTGAA CCGGCAGC-CGCA TCC CGCGCGCGGCCGG TGAATAACTCTGCGC TERM 668 542433 - 542420 - g 90 -5.2 -5.1861 | overlap 542421 TGGAGCATGAAAAAA CGCC GGAGCT GGCG GCTAAACTGGCGGCG TERM 669 542634 - 542616 - g 74 -6.7 -4.25104 | gap 1 CGGCGCGCAGCAAAA GCTG-GCG CAAG CGCTCAGC GATCTGACGGGAACG TERM 670 542751 - 542734 - g 74 -6.9 -4.24075 | opp_overlap 542734 542731 ATTTATGAAGAGAAA CTCGCGC AAGC GCGTGAG TCAATTATTGCGGAT TERM 671 542812 - 542772 - g 73 -9 -3.7941 | gap 1, opp_overlap 542775 TATTGCGGATAATAA CATTCAGACGCTGCGTCGA TTCT TCGACGCCGAG-CTGGATG AAGAGAGTATCCGCC dnaX 540907 - 542835 + | DNA polymerase III subunits gamma and tau TERM 672 542836 - 542854 + F 73 -9.6 -3.30124 | ATCCGCCCCATTTGA TCGTAAGC CCG GCTTGCGA TTGTGAACCATCAAG TERM 673 542954 - 542942 - g 79 -3.4 -5.17353 | AGATGCAGGAAAAAA TGCA GAAAA TGCA GGAAGAGATTGCGCA ybaB 542881 - 543210 + | hypothetical protein TERM 674 543630 - 543619 - g 85 -4.4 -5.24129 | TGGCGTCAGAAAAAA TCAG TGAG CTGA TCCTCGCGACCAACC recR 543210 - 543815 + | recombination protein RecR TERM 675 543844 - 543821 - f 100 -13.8 -4.1552 | TATTTTCTGAACAAA CGGAGGCGGC ATTC GCGGCCTCCG CTTGAAATCACACCC htpG 543926 - 545800 + | heat shock protein 90 TERM 676 545827 - 545839 + F 70 -9.1 -3.30124 | TGACTGCCGGATGGC GACGC GAA GCGTC TTATCCGGCCTACGG TERM 677 545870 - 545898 + F 84 -5.2 -5.31877 | gap 1, opp_overlap 545881, overlap 545871 CGAGTACTGTTTGTA GGCCGGATAAGCG CCAG CGCC-ATCCGGCA TTTTTTATAATACCT TERM 678 545871 - 545897 + F 72 -8.7 -3.78042 | gap 1, opp_overlap 545881, overlap 545870 GAGTACTGTTTGTAG GCCGGATAAGCG CCAG CGCC-ATCCGGC ATTTTTTATAATACC adk 546041 - 546685 + | adenylate kinase TERM 679 546745 - 546703 - f 82 -13.5 -3.05384 | overlap 546706 546743 TTTTCGCGTAGTGAA GCACTTATCAGGCCTGCTG TTATC CCGCAAGCCTGATAAGCGT AACGCCATCAGGCAA TERM 680 546742 - 546706 - f 90 -16 -2.75064 | overlap 546703 TCGCGTAGTGAAGCA CTTATCAGGCCTGCTG TTATC CCGCAAGCCTGATAAG CGTAACGCCATCAGG TERM 681 547844 - 547799 - g 74 -2.5 -5.00616 | opp_overlap 547805 547808, overlap 547802 GCGGGCGGTAAAAAA TATGCGTACATTCCGGCGCTG AACG CGACGCCGGAACATATTGATA TGATGCTGAAACTCA hemH 546914 - 547876 + | ferrochelatase aes 548844 - 547873 - | acetyl esterase TERM 682 548899 - 548881 - H 70 -2.3 -5.07053 | AACCATTGTAAAAAA CGCGGCT GGAGA AACTGCG ATCTCGTCGTCCGAT gsk 548997 - 550301 + | inosine-guanosine kinase ybaL 552026 - 550350 - | putative cation:proton antiport protein TERM 683 550994 - 550983 - G 77 -7.2 -4.30719 | opp_overlap 550970, overlap 550984 CCCGGCGAGAATAAA GGCG AACT CGCC GATTTGCGCCAGGCT TERM 684 551195 - 551175 - G 89 -3.1 -5.65927 | opp_overlap 551189 551190, overlap 551178 551187 551188 GACGGAAACAAAAAA CAGGACGGC AAA GGCGTCGCG CAGCGGCAACGTATC TERM 685 551478 - 551495 + g 73 -5.5 -4.58395 | ATCGACTGTCAGCGA GGCTATG CCGA CATCGCC TTTTTCCACCATGCC TERM 686 551767 - 551711 - G 71 -10 -3.56092 | gap 1, overlap 551712 CCAGCACGGCGGAAA GCGCCATACCCAGCAGCGTCGCCACCG CTAT CTG-AGCGACAGCGCCGGGAATGGCGA TAGACTTTACCGCCA TERM 687 551766 - 551712 - G 79 -13.5 -2.73441 | gap 1, overlap 551711 CAGCACGGCGGAAAG CGCCATACCCAGCAGCGTCGCCACCG CTAT CTG-AGCGACAGCGCCGGGAATGGCG ATAGACTTTACCGCC fsr 553461 - 552241 - | putative transport protein TERM 688 552559 - 552547 - G 76 -10.5 -3.75845 | TAAAACAAGGGTAAA CGGCG CGA CGCCG AGAATAGAGCCCCAA TERM 689 552812 - 552822 + g 74 -6.8 -4.30448 | CGCGGCAGCGGGTTA GCGA TTA TCGC TTTTGGCTTGCCTTT TERM 690 554814 - 554832 + G 70 -6.7 -4.15565 | gap 1, overlap 554823 TTCTGGCTGCGCAGA TCGCGCGC ACCG GCGC-CGA TTTTGGCGTGATGAG TERM 691 555006 - 554996 - g 71 -8.2 -3.89956 | GTAGCACAGATGAAA CCGG ACT CCGG CGCCTATCCACAGCT ushA 553634 - 555286 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor ybaK 555882 - 555403 - | hypothetical protein TERM 692 555618 - 555634 + g 75 -5.8 -4.56597 | opp_overlap 555592 GTTGCGCCACCATCG GGTCGG CCATA TCGACC TTTTTCGCGCCCAGA TERM 693 556057 - 556078 + r 100 -7.3 -5.96894 | overlap 556058 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTATTTCAAT TERM 694 556058 - 556077 + r 87 -10.8 -4.15696 | overlap 556057 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTATTTCAA ybaP 556878 - 556084 - | putative cytoplasmic protein TERM 695 556937 - 556923 - R 95 -12.8 -4.36914 | opp_overlap 556936 GCGCGTTGGAGAAAA GGGCGC AAT GCGCCC TGACGGGACGTCAAC STM0497 557791 - 556964 - | putative periplasmic protein TERM 696 557821 - 557832 + r 72 -3 -4.97159 | opp_overlap 557821 TATGATTCAAAAAAA CATT ATAA AATG TTGTTTTTTATTTTT TERM 697 557832 - 557821 - R 82 -3 -5.48825 | opp_overlap 557821 TATGATTCAAAAAAA CATT ATAA AATG TTGTTTTTTATTTTT TERM 698 557906 - 557941 + r 93 -9.8 -4.70879 | opp_overlap 557909 557939, overlap 557907 557908 557939 TTACTGATGGCTTAA TAATATATCAGGCAGC TGAT GCTGCCTGATATAGCG TTTTTACGCTTTCGG TERM 699 557907 - 557940 + r 79 -11.1 -3.41804 | opp_overlap 557909 557939, overlap 557906 557908 557939 TACTGATGGCTTAAT AATATATCAGGCAGC TGAT GCTGCCTGATATAGC GTTTTTACGCTTTCG TERM 700 557908 - 557939 + r 86 -14.6 -2.6436 | opp_overlap 557909, overlap 557907 557906 ACTGATGGCTTAATA ATATATCAGGCAGC TGAT GCTGCCTGATATAG CGTTTTTACGCTTTC TERM 701 557938 - 557909 - R 100 -18.1 -3.62597 | opp_overlap 557908 557907 557906 CTGATGGCTTAATAA TATATCAGGCAGC TGAT GCTGCCTGATATA GCGTTTTTACGCTTT copA 560446 - 557945 - | copper exporting ATPase TERM 702 559268 - 559303 + g 74 -4.5 -4.7254 | opp_overlap 559255, overlap 559270 GACGCTGCCGTCCTG GACGACGGTGCCGGC ATGAAC GCTGTCGCCTTCGCC TTTTTGCTGCGGAAT TERM 703 559414 - 559446 + g 76 -3.4 -5.04987 | gap 2, overlap 559429 TAGTGAGCCGCAGCA GCAT-CC-CTGGCTGA ACG TCCGCCAGCGGGACGC TTTTTTCGCCGTCTT TERM 704 559970 - 559981 + g 83 -7.2 -4.57073 | overlap 559969 TTCAATCGCTTCTGC GCCG TAGC CGGC TTTTTCCACCGCCTG TERM 705 560596 - 560584 - g 95 -5.5 -5.40474 | ATGTGGCGAAAAAAA CCGGT TTA ACCAG CAAAGCCATTCGGTT cueR 560556 - 560972 + | DNA-binding transcriptional regulator CueR ybbJ 561425 - 560973 - | hypothetical protein ybbK 562339 - 561422 - | putative inner membrane protein ybbL 562486 - 563163 + | putative ABC transporter ATP-binding protein YbbL ybbM 563150 - 563929 + | putative transport protein TERM 706 564059 - 564036 - T 73 -9.5 -3.30441 | CAGTAGCGCGTACAA CTGGCGGCG GTATTT CGACGCCAG CGCGTCGCCGGTGCC ybbN 564869 - 564015 - | putative thioredoxin protein ybbO 565699 - 564929 - | short chain dehydrogenase tesA 566468 - 565854 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 ybbA 566439 - 567125 + | putative ABC transporter ATP-binding protein YbbA TERM 707 567841 - 567857 + G 70 -8.7 -3.64049 | overlap 567829 567852 567853 ATCGCTCGAACGTTC GCAGCAG TTT TTGCTGC TTTCGGCGTTATTAA ybbP 567122 - 569536 + | putative inner membrane protein TERM 708 569553 - 569582 + F 85 -6.3 -5.14563 | opp_overlap 569553 569554, overlap 569554 569556 TCATGATGTGAATAA TTTCGCGCCGGTT TTTA AAACGGCGCGTAC TTTTTTAGTCGCACA TERM 709 569554 - 569581 + F 79 -9.8 -3.68256 | opp_overlap 569554 569553, overlap 569553 569556 CATGATGTGAATAAT TTCGCGCCGGTT TTTA AAACGGCGCGTA CTTTTTTAGTCGCAC TERM 710 569556 - 569579 + F 85 -12.4 -3.41701 | opp_overlap 569554 569553, overlap 569554 569553 TGATGTGAATAATTT CGCGCCGGTT TTTA AAACGGCGCG TACTTTTTTAGTCGC STM0509 569722 - 570855 + | putative outer membrane protein TERM 711 571809 - 571791 - g 71 -7.4 -3.95535 | overlap 571789 AGAATCTGAAAAATA TCATTGCG GTA CGCAGTGA AGATGCCGATAAGCC sfbA 571112 - 571942 + | putative ABC-type transport system ATPase component TERM 712 572062 - 572078 + G 81 -6.5 -4.6902 | overlap 572064 TGATGTGAGCCTGCA TATCGCC GCG GGCGAGA TTTTTGGCATTGTCG TERM 713 572949 - 572923 - g 71 -10.2 -3.29043 | gap 1, overlap 572928 AACCGCGCCGCATAA TCCAACGGCGG TGGCCG CCGCCG-TGGA GCATATCCGTCAACG TERM 714 572942 - 572928 - g 83 -12.8 -3.23274 | overlap 572923 CGCCGCATAATCCAA CGGCGG TGG CCGCCG CCGTGGAGCATATCC sfbB 571979 - 572995 + | putative ABC-type transport system ATPase component TERM 715 573069 - 573088 + G 70 -3.4 -4.73912 | overlap 573073 573085 ACGGTGCTGGCGATT CTTGGCGG TCTA CCGCTCGG TTTTCTGATTTTTGT TERM 716 573085 - 573096 + G 72 -2.2 -4.83615 | overlap 573069 TTGGCGGTCTACCGC TCGG TTTT CTGA TTTTTGTCACCGATC TERM 717 573117 - 573133 + G 82 -5.1 -5.06016 | overlap 573119 GTCACCGATCGTCAT CTGTTCT GGC AGAACCG TTTTATTTATCTCGT TERM 718 573248 - 573290 + G 100 -13.3 -4.3739 | opp_overlap 573246, overlap 573250 GGGCAATACGATAGG CCCGATTGCAGCCTCCGTC CCGCT GTCGGTGGCCGCAATCGCG TTTTATGCACGCCTG TERM 719 573250 - 573288 + G 81 -14.5 -2.52946 | opp_overlap 573246, overlap 573248 GCAATACGATAGGCC CGATTGCAGCCTCCGTC CCGCT GTCGGTGGCCGCAATCG CGTTTTATGCACGCC sfbC 572988 - 573647 + | putative ABC transporter permease component ybbB 574780 - 573686 - | tRNA 2-selenouridine synthase TERM 720 573725 - 573748 + g 100 -11 -5.27923 | AACGTCTTGCCATGT GCCGCGAAAA ACGA TATTCGCGGC TTTTTTCTCCAGTTG TERM 721 574744 - 574762 + g 76 -3 -5.09685 | TATCGGCAAGGAGGA GCGCGCGA TAG TCCTGTGC TTTTTGTCTGTCTTG ybbS 575776 - 574850 - | DNA-binding transcriptional activator AllS allA 576003 - 576485 + | ureidoglycolate hydrolase TERM 722 576510 - 576524 + F 71 -7.2 -4.12254 | opp_overlap 576508 576510 CCTTCTTGCATAAGA TGAACA TAT TGTTCA TTGTTTATGCTCATA allR 576564 - 577382 + | DNA-binding transcriptional repressor AllR TERM 723 577388 - 577409 + F 100 -10.1 -5.16472 | overlap 577389 TGTAGCCTGAGCCGC ATCCCGCTC GCTG GAGCGGGAC TTTTTTAAAATTTTT TERM 724 577389 - 577408 + F 100 -13.6 -3.67443 | overlap 577388 GTAGCCTGAGCCGCA TCCCGCTC GCTG GAGCGGGA CTTTTTTAAAATTTT gcl 577467 - 579248 + | glyoxylate carboligase gip 579261 - 580037 + | hydroxypyruvate isomerase TERM 725 580621 - 580602 - g 74 -2 -5.0133 | overlap 580604 580605 CATCCTGGGAAAAAA TATCACCC TGGT GGGCGGCA ATGGGGATGGGCAAA glxR 580138 - 581016 + | tartronic semialdehyde reductase TERM 726 581022 - 581047 + F 78 -11.9 -3.01712 | opp_overlap 581020 ATTGTCCTAATTATG TGTATCGCTGC GGCT GCAGCGATACC TGTTCACAAGGAACA TERM 727 582319 - 582303 - g 76 -2.9 -5.01422 | overlap 582308 TTATATAAAAAGAAA GCAACGC AAC GTATTGC TTCAGCTTAAAAATA STM0520 581082 - 582329 + | putative permease ybbV 582405 - 582659 + | putative cytoplasmic protein TERM 728 583332 - 583342 + GF 71 -6.8 -4.12043 | TGGATATTGTGCAGC GCTG GGA CAGC TTGTTTGCTTCATTC allP 582566 - 583879 + | allantoin permease TERM 729 584061 - 584046 - g 75 -6.1 -4.58395 | TCCAGGGCGGAAAAA TCGCC GCGATT GGCGA GAACCTGGGGGAAGC TERM 730 584573 - 584561 - g 73 -9.1 -3.85389 | GGCGAAGAAGCTAAA CGCGA AGG TCGCG TAACGGCGCATGATT TERM 731 585045 - 585068 + G 70 -3 -4.8048 | opp_overlap 585048 585049, overlap 585048 CGATGTTTGGCAAAT TAATGGCGAC CAAC GCCGCCGATA TTTTTGGTCTGAAAC allB 583958 - 585319 + | allantoinase TERM 732 585335 - 585355 + F 100 -16.9 -3.83378 | opp_overlap 585335, overlap 585328 TCCGGTGTGATTTAA TGCCCGTCG TCA CGACGGGCA TTCTCTATTTTAAGG TERM 733 585355 - 585335 - f 100 -16.9 -3.05384 | opp_overlap 585335 585328 TCCGGTGTGATTTAA TGCCCGTCG TCA CGACGGGCA TTCTCTATTTTAAGG TERM 734 585546 - 585560 + G 83 -10 -4.08767 | ACCACCGCGTTGGCC TGCCTG GTT CAGGCA TTTTGCGGCCATCGC ybbY 585378 - 586676 + | putative purine permease YbbY glxK 586699 - 587847 + | glycerate kinase II TERM 735 587878 - 587859 - T 100 -13.6 -5.71983 | TTAAGCATAAAAAAA GCCACGGT TCTC ACCGTGGC AAAATCCAACATAGC ylbA 588712 - 587927 - | hypothetical protein allC 589958 - 588723 - | allantoate amidohydrolase allD 591029 - 589980 - | ureidoglycolate dehydrogenase TERM 736 590406 - 590418 + g 70 -3.3 -4.82901 | GGCAAAAGGATCATG TGTCG GCG CGCCA TTTTTATCAACGGCC TERM 737 592129 - 592117 - g 70 -9.1 -3.73042 | opp_overlap 592116 592117, overlap 592115 GCGCGGATGAAAAGA GCCAG GTG CTGGC CTTTGTCTCCAAACC fdrA 591360 - 593024 + | membrane protein FdrA ylbE 593034 - 594293 + | putative cytoplasmic protein ylbF 594305 - 595114 + | putative cytoplasmic protein arcC 595118 - 596011 + | carbamate kinase purK 597119 - 596052 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 738 596850 - 596867 + g 72 -2 -4.96848 | CGCGGTCGCGAGTCC CAGTTT ATCGAA AAGCTG TTTTTGTGTCAGACG purE 597625 - 597116 - | phosphoribosylaminoimidazole carboxylase catalytic subunit lpxH 598465 - 597743 - | UDP-2,3-diacylglucosamine hydrolase TERM 739 597897 - 597910 + g 74 -4.5 -4.81249 | overlap 597885 TGACCGTGAATCAGC CACTG TACG CGGTG TTTTTCCATTTCGGC TERM 740 598428 - 598395 - G 100 -11.1 -5.03314 | gap 1, opp_overlap 598404, overlap 598397 598404 TCTACGGCTAAAAAA CGCAGAAAACCGGCGA CGA TCGCCGGTTCT-TCCG TTTGCAGATGCAAGT TERM 741 598428 - 598397 - G 83 -14.6 -2.76422 | gap 1, opp_overlap 598404, overlap 598395 598404 TACGGCTAAAAAACG CAGAA-AACCGGCGA CGA TCGCCGGTTCTTCCG TTTGCAGATGCAAGT TERM 742 598404 - 598420 + g 93 -13.7 -3.77832 | opp_overlap 598395 598397 598404 AAAAAACGCAGAAAA CCGGCGA CGA TCGCCGG TTCTTCCGTTTGCAG TERM 743 598420 - 598404 - G 100 -13.7 -4.58242 | opp_overlap 598404, overlap 598395 598397 AAAAAACGCAGAAAA CCGGCGA CGA TCGCCGG TTCTTCCGTTTGCAG ppiB 598962 - 598468 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 744 598719 - 598729 + g 73 -5.4 -4.58283 | GCGCCATCGCCAGCG TACC ACG GGTA TTTTTCAGACCATTG cysS 599135 - 600520 + | cysteinyl-tRNA synthetase TERM 745 600530 - 600559 + T 100 -15.1 -6.04324 | AAGTAAGCGCTTTTA CAGGCCGCTCTAT TTGC ATAGAACGGCCTG TTTTTTATTTTTTCG STM0538 601388 - 600564 - | putative outer membrane protein STM0539 601822 - 601385 - | putative inner membrane protein TERM 746 601444 - 601460 + g 80 -8.7 -4.15748 | opp_overlap 601443 CCTGATTTACCATAT GGGCAAG GAC TTTGCCC TCTTTTTTCAAATAA TERM 747 601477 - 601494 + g 77 -4 -5.02074 | opp_overlap 601477 CTTTTTTCAAATAAG CGCCGG TGCCTT CCTGCG TTTTTTCCAGAGTGA ybcI 602360 - 601815 - | putative membrane-bound metal-dependent hydrolase TERM 748 602480 - 602447 - R 78 -12.5 -2.75307 | gap 1, opp_overlap 602447, overlap 602457 AAGACAGCGTAATCA GGCCGGATAA-GACGC TTT GCGTCGCTATCCGGCA CTCTGTATCAGGCCA TERM 749 602447 - 602481 + r 70 -10.1 -2.98823 | gap 2, opp_overlap 602447 602457 AAGACAGCGTAATCA G-GCCGGATA-AGACGC TTT GCGTCGCTATCCGGCAC TCTGTATCAGGCCAC TERM 750 602469 - 602457 - R 70 -9.1 -3.30619 | opp_overlap 602447, overlap 602447 AATCAGGCCGGATAA GACGC TTT GCGTC GCTATCCGGCACTCT ybcJ 602700 - 602488 - | hypothetical protein folD 603568 - 602702 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 751 602733 - 602747 + g 70 -7.1 -4.18494 | opp_overlap 602731 602735 TCGTGATATTCAATG CACGC CTGCA GCGTG TTTTCGATAAGCGTG TERM 752 603134 - 603106 - G 74 -11.2 -3.18264 | overlap 603124 GGCCGTAGGTATCAA TATTGTAACGCT CAAGC AGCGTCACAATA CCGCGGGGCGTACAG fimA 604130 - 604672 + | fimbrin TERM 753 605039 - 605057 + G 70 -3 -4.82901 | overlap 605041 TTTGCCGGCGTTACG CCTGCGGA AGA TCCCCATG TTTTTCTGGCCAGCG fimI 604748 - 605281 + | fimbrial protein fimC 605325 - 606017 + | periplasmic chaperone TERM 754 606198 - 606208 + G 70 -6.8 -4.11295 | overlap 606193 606204 TCGGCGGATACCGCG TCCG TGG CGGA TTTATCTCGCTTTGA fimD 606048 - 608660 + | outer membrane usher protein precursor fimH 608675 - 609682 + | minor fimbrial subunit fimF 609692 - 610210 + | putative fimbrial protein fimZ 610888 - 610256 - | transcriptional regulator FimZ TERM 755 610370 - 610380 + g 73 -5.4 -4.67607 | opp_overlap 610370 GTTACTCAATAAAAG TTGC TCG GCAA TTTCTTTGTTAGACA fimY 612214 - 611492 - | putative regulatory protein STM0551 612544 - 612233 - | hypothetical protein TERM 756 612314 - 612300 - G 71 -4.2 -4.63527 | opp_overlap 612300 GCACCAGCGTAAAAA GCAATG CTT CGTTGC TCTGATGTTTCAATG fimW 613302 - 612706 - | putative fimbrial protein TERM 757 613192 - 613221 + g 88 -13.7 -3.33696 | overlap 613186 ATTATCTATCTCTTC TGGCGGCAGAAAG TCAA TTTTCTGCTGCCA TTGATTCGCCAGACG STM0554 613781 - 613593 - | integrase STM0557 616456 - 614804 - | putative inner membrane protein yfdH 617363 - 616437 - | putative glycosyltransferase rfbI 617722 - 617360 - | putative glycosyl translocase TERM 758 617902 - 617939 + r 82 -7.8 -4.58395 | opp_overlap 617906 617910, overlap 617905 GGGACAAAAACGGGA CACACAAAGCTTTGCA TCGGCT TGCAAGGCTTTGCATG TTTTTCGAAGATGGG STM0561 618919 - 618590 - | sensor kinase TERM 759 618634 - 618624 - G 74 -2.4 -5.10163 | opp_overlap 618624 AATGTCAAAATAAAA CGAG TAG CGCG TGTATCGGAGGTGAC TERM 760 619208 - 619256 + r 74 -8.2 -3.96148 | gap 2, opp_overlap 619208 CGCCTTGCGGCATAA CGTGTGC--ACCCCGCCTGCGG CGTCAAA CTGCAGGCGGGTTCAGCGTACG TTTATCGTCCGAGCG STM0563 620112 - 619258 - | putative transcriptional regulator TERM 761 619495 - 619476 - G 70 -10 -3.35224 | gap 1, overlap 619474 ACACGTCGCGAAATA GCTGGGCGA AGC TCGCCC-GC GACATGTGTACCCGT TERM 762 621045 - 621034 - g 74 -7.2 -4.1021 | CGGTACAAGTAGAAA CGCC GGAA GGCG CGCATCTTGTGGATG STM0564 620328 - 621653 + | pyridine nucleotide-disulfide oxidoreductase TERM 763 621685 - 621669 - f 70 -9.4 -3.41209 | opp_overlap 621669, overlap 621667 621665 621662 AACATAAATAATATA GCCCTG TTAAT CAGGGC TTTTTTTTGCCTGTC TERM 764 621669 - 621685 + F 100 -9.4 -5.83822 | opp_overlap 621669 621667 621665 621662 AACATAAATAATATA GCCCTG TTAAT CAGGGC TTTTTTTTGCCTGTC TERM 765 621738 - 621713 - f 74 -3.9 -4.95155 | overlap 621715 GTCAGACCATAAAAA TACGCCAGGAC AAAT ATGCTGGCGTC TGAAAGAAAAGGCTT TERM 766 621850 - 621860 + G 77 -8.2 -4.19238 | CTTCATTATTGGCTG CGCC GCT GGCG TTTTCCGCTTCCGCC STM0565 621810 - 622046 + | putative periplasmic protein STM0566 622059 - 622619 + | putative inner membrane protein TERM 767 622643 - 622682 + T 77 -10.9 -3.19463 | gap 2, overlap 622649 TTACCCTCTTTATGC CGCGATTCGTCGGGTGGCG CTTG CGCCATCCGAC-AAT-GTG TTGATGAATGATGGA TERM 768 622649 - 622678 + T 90 -14.3 -3.13867 | overlap 622643 TCTTTATGCCGCGAT TCGTCGGGTGGCG CTTG CGCCATCCGACAA TGTGTTGATGAATGA STM0567 623873 - 622698 - | putative DNA repair ATPase TERM 769 623021 - 623042 + g 89 -3 -5.54338 | gap 1, overlap 623023 623024 GCCGCGCCTGATTAA GCTGTACCA TCATC TGGTGC-GC TTTTTCTTTTAATTC TERM 770 624342 - 624376 + G 78 -7.1 -4.66987 | gap 1, opp_overlap 624362, overlap 624344 CGGACTGTTTCTGGG CA-TCGGCCCGGCGAT TCAA ATGGCGGGGCCGGCTG TTTTGTTGGGCTATG TERM 771 624497 - 624510 + G 75 -3.7 -4.84359 | CCTGGAAATATTGGG GGCCG TTTG CGGGC TTTTTGTCGGGCTGG pheP 624199 - 625593 + | phenylalanine transporter TERM 772 625599 - 625630 + T 90 -16 -2.56596 | opp_overlap 625594, overlap 625595 GGCTCATTAACTTTT TTGCCCGATCCCAT GTTC ATGCGATCGGGCAA TCCATTAATGCCGCA ybdG 626882 - 625635 - | hypothetical protein TERM 773 626019 - 626036 + g 72 -4.1 -4.78107 | gap 1, opp_overlap 626004, overlap 626004 626020 CGGCTTTAACAGTTG C-GCGGTT AAC AGCCGCTG TTTTTCATCATCATC TERM 774 626020 - 626034 + g 71 -7.8 -4.00443 | opp_overlap 626004, overlap 626004 626019 GGCTTTAACAGTTGC GCGGTT AAC AGCCGC TGTTTTTCATCATCA TERM 775 626921 - 626900 - H 71 -8 -3.85698 | opp_overlap 626917 TCTCTCCTTTATAAA CAGCAGCC TATGAT GACTGCTG AATGGCATTTATGCA TERM 776 627751 - 627731 - g 76 -12.5 -2.71731 | TGGAGGCGGTAATCA CCGCTGGGC TGG GCGCAGCGG CGCCCCCGGCGCTAA TERM 777 628854 - 628832 - g 71 -10.6 -3.3071 | overlap 628833 ATACCAGTACATCAA TGCGTTTTGG TGA CCAAAACGCC CATTCGCAGGTGGGT TERM 778 628853 - 628833 - g 81 -14.1 -2.57944 | overlap 628832 TACCAGTACATCAAT GCGTTTTGG TGA CCAAAACGC CCATTCGCAGGTGGG apeE 627193 - 629163 + | outer membrane esterase TERM 779 631456 - 631443 - g 80 -4.5 -5.09225 | opp_overlap 631443 ATTTGATGGAAAAAA GTCAG TTGA CCGAC TTTGATATTAATATT STM0571 629330 - 632059 + | putative inner membrane protein TERM 780 632096 - 632081 - T 100 -11.8 -4.66609 | TAGTTCAGGGAAAAA GGGGCG CTAG CGCCCC GCAGAAGAAAGACCT TERM 781 632134 - 632107 - T 74 -7 -4.30719 | gap 1 GCCCCGCAGAAGAAA GACCTGAT-GGCG CTA CGCTTATCAGGCC TACAGATCGCTTTGT STM0572 633173 - 632187 - | putative phosphosugar isomerase TERM 782 632754 - 632765 + g 81 -3.6 -5.18726 | overlap 632743 CAGCGCCAGCCACAG GCTG TATG CGGC TTTTTGTTGTGCAGG STM0573 634283 - 633240 - | putative inner membrane protein TERM 783 633669 - 633693 + g 71 -9.9 -3.51232 | opp_overlap 633668 633667, overlap 633686 GGTCAGACGAATATC TGCGCTATCGC GCA GCGCCAGCGCA TTGGTTTGCGCCCAC STM0574 635170 - 634316 - | putative PTS system mannose-specific enzyme IID STM0575 635916 - 635173 - | putative inner membrane protein STM0576 636401 - 635931 - | putative PTS system mannose-specific enzyme IIAB TERM 784 636186 - 636200 + g 83 -7.8 -4.57073 | TTTTTTGTGATCCAG CTTGCC GCT GGCGAG TTTTTCCGCCGCCTG STM0577 636828 - 636379 - | putative PTS system mannose-specific enzyme IIAB TERM 785 637015 - 636998 - R 100 -12.7 -5.1361 | AGAAAGGTGAAAAAA GCCGGAC GGGC GTCCGGC TTAGGCAGGGGATTA nfnB 637681 - 637028 - | dihydropteridine reductase TERM 786 637484 - 637495 + g 71 -5.8 -4.25104 | GTTGAACGTGTAGTT TCCG GCAG CGGA TTTTGCTACGCGCGC ybdF 638146 - 637778 - | hypothetical protein STM0580 638727 - 638146 - | putative regulatory protein TERM 787 638235 - 638203 - G 76 -12.1 -3.08813 | gap 1, opp_overlap 638202 638196 638219 TCCCAGCGCAATATA TTCGCCA-GCGCGA GCGGGA TCGCGCGCGGCGAA ATCCATTGTTGTTTC TERM 788 638289 - 638268 - G 72 -2.1 -4.84359 | gap 1, opp_overlap 638268 638270, overlap 638269 638270 CCAGCGCCAGAAAAA GGCCGTCGCC GAA GGCG-CGGTA TTCATCCGACATAAA TERM 789 638769 - 638755 - H 80 -7.2 -4.57569 | overlap 638765 638768 TTATGTCTGGAAAAA CATGAT TGA ATCATG CCCGTTGTCGCGTCG TERM 790 639125 - 639139 + G 74 -2.7 -4.85599 | CGGGGTATTCCAAGT GGCAC CTGCA GCGCC TTTTTATGCAGTACA STM0581 639016 - 639357 + | putative regulatory protein ybdJ 639611 - 639363 - | putative inner membrane protein ybdK 640796 - 639678 - | carboxylate-amine ligase entD 641512 - 640808 - | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex fepA 643813 - 641558 - | outer membrane receptor FepA TERM 791 642470 - 642500 + g 77 -8.3 -4.07568 | overlap 642466 642463 642473 ACGTAGCCCCGGCGT CAGCATGGTGCTG TCGGT CAGTTCCATGTTG TTTTCAGCAAACAGA TERM 792 642884 - 642898 + g 77 -7.8 -4.24963 | opp_overlap 642886, overlap 642875 GTAGTTCTGCCGATA GAGGCG GTT CGTCTC TTTTCCGTAATTATC TERM 793 644778 - 644731 - g 76 -12 -3.1355 | gap 1 GCGATTGATACTCAA CACCG-CAGCCAGGAGTTGCCCT GCA ATGCCGACTTCTGGCTGGCGGTG CAGCAGGAACTGTTG fes 644002 - 645216 + | enterobactin/ferric enterobactin esterase ybdZ 645247 - 645465 + | putative cytoplasmic protein TERM 794 646096 - 646128 + G 72 -12 -2.55712 | gap 2, overlap 646095 646094 CGGCGTCAATGTCTG CCGCGC-CGTTG-CCG GGG CGGTCGGCGAGCGCGG ATATTCTGCGTATGA TERM 795 646824 - 646804 - g 75 -11.1 -3.41325 | opp_overlap 646823, overlap 646802 CACACCTTAATAATA CGGCGGTAA CGA TTCCCGCCG CCACGCTTAGCGATT TERM 796 646874 - 646864 - g 74 -2.4 -5.03715 | AGCAGGCGCAAAAAA CGCC AGA GGCT TCCGCGTTGGCAGAT TERM 797 647598 - 647616 + G 75 -6.7 -4.52589 | opp_overlap 647597, overlap 647580 647599 TCGGCTGGGAAAAGC TGCGCTT CCTTA AAGCGCG TTTTCTGTAGCGGCG TERM 798 648908 - 648941 + G 95 -10.3 -4.67904 | gap 1, opp_overlap 648904 GGCGCAAGGGATCGC CGCC-CGGTTGCGC GCGCGCG GCGAAACCGTGGCG TTTTTGGGGTTACTG TERM 799 649010 - 648996 - g 78 -7.1 -4.57341 | AACTGGCGGGAAAAA GAGGC GAATG GCCTC AATCCGGACGTATTG entF 645462 - 649346 + | enterobactin synthase subunit F TERM 800 649412 - 649386 - f 93 -14 -3.65084 | opp_overlap 649386 AATTAAATCCTGAAA CCCATAATAATT ACT AATTATTATGGG TTTTTTATTGCAACT TERM 801 649386 - 649412 + F 100 -14 -5.45652 | opp_overlap 649386 AATTAAATCCTGAAA CCCATAATAATT ACT AATTATTATGGG TTTTTTATTGCAACT TERM 802 650250 - 650236 - g 83 -7.8 -4.55128 | AGCTGGAAATCAAAA CCCGCT ATG AGCAGG AAAAGCTGGCGATGG TERM 803 650612 - 650592 - g 82 -5.4 -5.08824 | opp_overlap 650592 CTGCCAGTGAAAAAA GATGGCCC GGGTA AAGCCATC ATTATTATCCTGGCG fepE 649596 - 650732 + | ferric enterobactin transport protein FepE TERM 804 650764 - 650745 - T 95 -12.2 -4.14739 | opp_overlap 650745 TGATTTACCCGAAAA GCCGGATA GCGA TATCCGGC TTTGTCATCAGTGTG TERM 805 650745 - 650764 + T 95 -12.2 -3.98661 | opp_overlap 650745 TGATTTACCCGAAAA GCCGGATA GCGA TATCCGGC TTTGTCATCAGTGTG fepC 651579 - 650785 - | iron-enterobactin transporter ATP-binding protein fepG 652565 - 651576 - | iron-enterobactin transporter permease TERM 806 652350 - 652334 - G 74 -4.3 -4.7078 | overlap 652323 652336 TCAACGACTGAAAAA TCGCGCC ACT GACGCCA AGCGCAGCGCCAATC fepD 653572 - 652565 - | iron-enterobactin transporter membrane protein TERM 807 653222 - 653212 - G 74 -6.8 -4.29432 | TAAATGCCATGAAAA GCTG TTC CAGC GGCGTGGAGAAACCA ybdA 653683 - 654927 + | enterobactin exporter EntS TERM 808 654982 - 654932 - T 83 -13.5 -3.14211 | gap 1, opp_overlap 654943 ATGCTGGCTGATGAA GGGGCGTTTATCCGACTGACCAAA TCGG TCTGGTCAGTCGGATAAG-ACTCC GATAAGGCTAAAACA fepB 655946 - 654990 - | iron-enterobactin transporter periplasmic binding protein TERM 809 655582 - 655553 - G 77 -11.4 -3.60805 | gap 1 AGAGCTGATCGTAAA GCGCCAGC-GCGG AGTCG CCGCCGGTGGCGC TAATCAAAATGAGAT entC 656255 - 657430 + | isochorismate synthase TERM 810 658650 - 658665 + G 74 -3.2 -4.87626 | opp_overlap 658643 TACACAATGCCAGCG CCTTTG ACGC CAACGG TTTTTACTGTTCCGG TERM 811 659035 - 659015 - g 76 -5.4 -4.72201 | overlap 659018 GTCGATAAAAAACAA TTACGCCA GCGGT TGGCGTCA CGTTCACCGCTCTGA entE 657440 - 659050 + | enterobactin synthase subunit E entB 659064 - 659921 + | 2,3-dihydro-2,3-dihydroxybenzoate synthetase entA 659921 - 660676 + | 2,3-dihydroxybenzoate-2,3-dehydrogenase ybdB 660679 - 661092 + | hypothetical protein cstA 661274 - 663379 + | carbon starvation protein TERM 812 663395 - 663421 + F 72 -9.4 -3.6502 | opp_overlap 663394 663396, overlap 663396 TCTTTTTACATCAAT AGCCCTCTCC AGAATAA GGAGAGGGCA TTTGAATGACAGGTG TERM 813 663396 - 663420 + F 82 -12.9 -2.78798 | opp_overlap 663394 663396, overlap 663395 CTTTTTACATCAATA GCCCTCTCC AGAATAA GGAGAGGGC ATTTGAATGACAGGT TERM 814 663420 - 663396 - f 83 -12.9 -3.19602 | opp_overlap 663396 663395, overlap 663394 CTTTTTACATCAATA GCCCTCTCC AGAATAA GGAGAGGGC ATTTGAATGACAGGT ybdD 663443 - 663640 + | putative cytoplasmic protein ybdH 664764 - 663676 - | hypothetical protein TERM 815 663939 - 663951 + g 70 -3.4 -4.81249 | overlap 663948 CATAAGCCACTTTCG TTCC GTGCA GGAA TTTTTCCGTTTGCGG TERM 816 665724 - 665702 - g 76 -11.9 -3.01712 | opp_overlap 665700 CGTTTTGCGTCAATA CGCCGGCGC AACTG GCGCTGGCG GATATGCTGCGCGCC ybdL 664891 - 666051 + | putative aminotransferase ybdM 666669 - 666052 - | putative transcriptional regulator TERM 817 666113 - 666079 - GT 71 -10 -3.29144 | opp_overlap 666079 666077 666074 666083, overlap 666060 CCACGCTCTGGAGAA TCGACGGTCTGCAAAA AGC TCCTGCAGGCCGTTGA TCTGTTTCAGGCGCA TERM 818 666079 - 666113 + gT 71 -10.1 -3.24232 | opp_overlap 666060 666079, overlap 666077 666074 666083 CCACGCTCTGGAGAA TCGACGGTCTGCA AAAAGCTCC TGCAGGCCGTTGA TCTGTTTCAGGCGCA ybdN 667877 - 666642 - | putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase TERM 819 666847 - 666863 + gr 85 -2.2 -5.55769 | CCATGCTGCGTTTGT GGAATG GTGTG CATGCC TTTTTTCTTATACCA TERM 820 667385 - 667406 + gr 70 -2.8 -4.82901 | opp_overlap 667385 CGTCGGAACGAATAC CGACCAGC ATAGCG GCAGGACG TTTTTCTGAAAACCA TERM 821 667623 - 667612 - GR 74 -2.2 -5.10461 | GCGACCCAATAAAAA CGCT CAAT AACG TCCGCGTAGTATTCA ybdO 668945 - 668043 - | putative transcriptional regulator TERM 822 668237 - 668212 - G 74 -2.5 -5.00616 | overlap 668219 GTTTGTGGTAAAAAA CCAATAAGCTC CGTG GAGCTGATAGA GTTGGCGATGGTCAT dsbG 670008 - 669262 - | disulfide isomerase/thiol-disulfide oxidase TERM 823 669904 - 669921 + g 72 -4.1 -4.69027 | CGCCTCGAAGGATTT CAGGATA GTTA TACCCTG TTTTTCAATGGCTTT TERM 824 670275 - 670293 + H 100 -16 -5.00138 | opp_overlap 670272 TAGTTCAGGTAATGG GGCCGCCT GTC AGGCGGCC TTTTTACTTTAGATG TERM 825 670338 - 670348 + H 72 -8.2 -3.81414 | GTGTTCACAATGTCG CCCG AAT CGGG TTGTTAGTTAACGCT TERM 826 670524 - 670502 - g 95 -10.6 -4.57569 | CCAGGCGTTCAAAAA CGGTGAATTC ATT GAAGTCACCG AGAAAGATACCGAAG ahpC 670449 - 671012 + | alkyl hydroperoxide reductase subunit C TERM 827 671149 - 671166 + F 95 -12.7 -4.05788 | AAATTGTTTCAGTCA TGGGCGC ACCC GCGCCCA TTTCATTTCAGCACC TERM 828 672545 - 672586 + G 74 -2.9 -4.8543 | gap 1, overlap 672546 GACTGGAGTATCGTG ACCGTGTCAGCGGCGATATT CAT AGCGTCGC-GCTGGCAGGGA TTTTTGTGCAGATTG ahpF 671254 - 672819 + | alkyl hydroperoxide reductase F52a subunit TERM 829 672897 - 672933 + F 77 -8.8 -3.86312 | gap 1 GCTATTCGGGCCTGC GGTGTTTATGCCTGGGG AACG CACCGGGTA-AAACACC TTCTTCATTATCAAT TERM 830 672958 - 672978 + F 100 -14.1 -5.63517 | opp_overlap 672958 ATCAATACTCTGAAA CCGTCTGTT AAT AACAGACGG TTTTTTATTTCAACG TERM 831 672978 - 672958 - f 93 -14.1 -3.61328 | opp_overlap 672958 ATCAATACTCTGAAA CCGTCTGTT AAT AACAGACGG TTTTTTATTTCAACG STM0610 673151 - 673711 + | putative anaerobic dehydrogenase component TERM 832 673727 - 673738 + G 80 -4.4 -5.00884 | TGAGACGGGACATCT GAAC AGAC GTTC TTTTTTAAAGGGGAT TERM 833 675180 - 675151 - g 73 -9.3 -3.90291 | gap 1, overlap 675161 AGTTCTTCAACGAAA CGGTGCAACACGCT GAT ATCGTGCTGC-CCG TTACCACCGCGTTTG TERM 834 675558 - 675548 - g 74 -4.6 -4.83169 | overlap 675549 ACTGGCGGAGAAAAA CGGC CAC ACCG CGCTGCCGGAATACA STM0611 673704 - 675983 + | putative oxidoreductase protein STM0612 675980 - 676537 + | putative hydrogenase protein STM0613 676537 - 677304 + | putative hydrogenase protein TERM 835 677315 - 677355 + T 84 -8.2 -4.56597 | opp_overlap 677322, overlap 677316 677319 ACTAACGATGATGCA GTAAAAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTGTAAG TTTTTAGCCACCAGA TERM 836 677316 - 677354 + T 82 -11.7 -3.33744 | opp_overlap 677322, overlap 677315 677319 CTAACGATGATGCAG TAAAAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTGTAA GTTTTTAGCCACCAG TERM 837 677319 - 677351 + T 82 -13.4 -2.83903 | opp_overlap 677322, overlap 677316 677315 ACGATGATGCAGTAA AAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTG TAAGTTTTTAGCCAC TERM 838 677348 - 677322 - T 100 -20.2 -4.75372 | opp_overlap 677319 677316 677315 ATGATGCAGTAAAAA GCCCTGCCAGGC GTG ACCTGGCAGGGC GTGTAAGTTTTTAGC ybdQ 677800 - 677372 - | putative universal stress protein TERM 839 678400 - 678377 - g 89 -3 -5.5112 | gap 1, opp_overlap 678377 678382, overlap 678381 678382 GCGATGAATAAAAAA CAGATCCCGCC ACC GGCGGCG-CTG TTTGGGTATAGCCAT TERM 840 678942 - 678957 + G 87 -8.2 -4.64334 | overlap 678920 GCGTGGTCAGCGTGC CCGGCG TGTA TGCCGG TTTTATTCACGGCTT TERM 841 679026 - 679014 - g 74 -7.7 -4.14392 | opp_overlap 679014 GGCTAACTTTTAAAA TGGGT CAA ACCCA TGTTCACGCGTGGCT ybdR 678023 - 679261 + | putative dehydrogenase TERM 842 679292 - 679311 + T 79 -12.2 -2.87881 | opp_overlap 679292, overlap 679294 679307 679310 AAGGGCTAACGGAAA GAGGATGC GCAG GCATCCTC TGTGTAAACGCATTA TERM 843 679311 - 679292 - T 93 -12.2 -3.75897 | opp_overlap 679292 679294 679307 679310 AAGGGCTAACGGAAA GAGGATGC GCAG GCATCCTC TGTGTAAACGCATTA rnk 679754 - 679344 - | nucleoside diphosphate kinase regulator TERM 844 679835 - 679813 - R 100 -12.7 -5.07652 | opp_overlap 679813 GGTCCCAAAAGAAAA CCCTCACCG TCTGG CGGCGAGGG TTTAACTCTCATGAT TERM 845 679813 - 679835 + r 86 -11.2 -3.72968 | opp_overlap 679813 GGTCCCAAAAGAAAA CCCTCACCGT CTG GCGGCGAGGG TTTAACTCTCATGAT rna 680795 - 679989 - | ribonuclease I TERM 846 680670 - 680659 - G 72 -3.6 -4.82901 | opp_overlap 680643 TGGCTTTGACAAAAA CCGG TTTG CCAG GAAAGCGCCAGCACA TERM 847 680848 - 680879 + r 80 -7.2 -4.63184 | opp_overlap 680851, overlap 680849 680851 CCATTTAATCATAAA AAATGCCGCTCAGG TGAA CCTGAACGGCATCA TTTTTAACCTGCGTT TERM 848 680849 - 680878 + r 77 -10.7 -3.37188 | opp_overlap 680851, overlap 680848 680851 CATTTAATCATAAAA AATGCCGCTCAGG TGAA CCTGAACGGCATC ATTTTTAACCTGCGT TERM 849 680851 - 680876 + r 83 -13.3 -3.25166 | opp_overlap 680851, overlap 680849 680848 TTTAATCATAAAAAA TGCCGCTCAGG TGAA CCTGAACGGCA TCATTTTTAACCTGC TERM 850 680876 - 680851 - R 100 -15.5 -5.37345 | opp_overlap 680849 680848 680851 TTTAATCATAAAAAA TGCCGCTCAGG TGAA CCTGAACGGCA TCATTTTTAACCTGC citT 682368 - 680905 - | citrate/succinate transport antiport protein TERM 851 681805 - 681794 - G 71 -7.2 -4.05208 | overlap 681795 ATCCACATCAAATAA CCGC CGAT GCGG CGTGCGGAAGGATCG TERM 852 681999 - 681985 - G 70 -3.4 -4.74801 | overlap 681987 GAATTTTACCAAAAA CAGCGC AAT GCGGCG CCCCAGCCCGGTCAC citG 683302 - 682406 - | triphosphoribosyl-dephospho-CoA synthase citX 683825 - 683274 - | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase citF 685358 - 683829 - | citrate lyase alpha chain/citrate-ACP transferase TERM 853 684473 - 684484 + g 75 -5.8 -4.66537 | opp_overlap 684463 684461 684460 AATTAGCCACAATGT TGCG GCTA CGCA TTTTGTCTTCCAGGA TERM 854 684635 - 684649 + g 72 -2.1 -4.90778 | gap 1, overlap 684634 684638 TAGTGGTCATGCGGG TC-GCG CCAG CGCCGA TTTTGTTTGCATCAC citE 686276 - 685368 - | citrate lyase beta chain TERM 855 686108 - 686120 + g 78 -6.9 -4.63527 | opp_overlap 686107 686105 CGTGATATACCAGAC GGCGC GCC GCGTC TTTTTCGCGTAATGC citD 686569 - 686273 - | citrate lyase subunit gamma TERM 856 686433 - 686413 - G 73 -8.9 -3.91897 | CGTCGTAGCGAGAAA GCACCTCCA GGA TGGTGGCGC GAATGGCCTCGCCAA citC 687642 - 686566 - | citrate lyase synthetase dpiB 688027 - 689688 + | sensory histidine kinase dpiA 689657 - 690337 + | two-component response regulator DpiA TERM 857 690381 - 690351 - T 85 -13.9 -3.02043 | AAGCCTGGTTTAAGA TGCCGGGGCGATG TTTTC CCTCGCCCCGGCT TACCGGCTATCAGCC dcuC 691776 - 690391 - | C4-dicarboxylate transporter DcuC TERM 858 690740 - 690720 - G 71 -10.5 -3.25111 | overlap 690718 690735 TTAAAATCACTAAGA CCAGCATCA GAA TAATGCTGG CGGAGCCAAAAGAAG TERM 859 691306 - 691284 - G 89 -13.4 -3.59262 | CCGGAGAGGCGCAAA TAGCCGCCGC CGC GCCGCGGCTA ATGCCGACGTTGACC TERM 860 691699 - 691689 - G 95 -8.2 -4.99043 | CGCCGACAAATAAAA CGCC AGT GGCG GAATATCCCTTAATG pagP 692155 - 692727 + | palmitoyl transferase for Lipid A TERM 861 692873 - 692889 + F 71 -7.3 -4.02302 | overlap 692851 GTTGTACTGGTATCC GACACAG CAT TTGTGTC TATTTTTCATGTAAA cspE 692915 - 693124 + | cold shock protein CspE TERM 862 693169 - 693153 - T 90 -10.8 -4.20042 | opp_overlap 693153 AGCAAGATTTCAAAA CCCGCC CTTTC GGCGGG TTTTTTTTGCGCTTA TERM 863 693153 - 693169 + T 100 -10.8 -5.81032 | opp_overlap 693153 AGCAAGATTTCAAAA CCCGCC CTTTC GGCGGG TTTTTTTTGCGCTTA ccrB 693565 - 693182 - | camphor resistance protein CrcB TERM 864 693818 - 693844 + G 76 -10 -3.86194 | overlap 693839 CTTGACCTGCCGATT CGCGCCGCGCAG CCG CTGGATGGCGCG TTTATGACGCGGCTT ybeM 693656 - 694444 + | putative hydrolase TERM 865 694532 - 694551 + F 74 -5.6 -4.72272 | gap 1, overlap 694534 TATTCTCAGGTTAAT CCGGC-GCG TTA CGCAGCCTG TTTTTAGTGAAGAAG tatE 694573 - 694776 + | twin arginine translocase protein E TERM 866 694825 - 694811 - T 100 -8.5 -5.58454 | opp_overlap 694811 CGCAGAGTAAAAAAA CCGGC GAGTT GCCGG TTTTTTTTGCCTGAA TERM 867 694811 - 694825 + T 100 -9.2 -5.81412 | opp_overlap 694811 CGCAGAGTAAAAAAA CCGGCG AGT TGCCGG TTTTTTTTGCCTGAA lipA 695827 - 694862 - | lipoyl synthase ybeF 696986 - 696033 - | putative DNA-binding transcriptional regulator lipB 697929 - 697288 - | lipoyltransferase ybeD 698292 - 698029 - | hypothetical protein TERM 868 698350 - 698320 - R 100 -13.5 -5.82316 | gap 1, opp_overlap 698326, overlap 698326 ATTACGTAAAAAAAA TAACAACTCCCGCC ACAG GGCGGGAGTT-TTA CTGATGCATAGTATA TERM 869 698345 - 698326 - R 100 -15 -4.53495 | opp_overlap 698326, overlap 698320 TAAAAAAAATAACAA CTCCCGCC ACAG GGCGGGAG TTTTACTGATGCATA TERM 870 698326 - 698345 + r 100 -15 -4.3129 | opp_overlap 698326 698320 TAAAAAAAATAACAA CTCCCGCC ACAG GGCGGGAG TTTTACTGATGCATA dacA 699612 - 698401 - | D-alanyl-D-alanine carboxypeptidase fraction A TERM 871 699405 - 699421 + g 71 -4.4 -4.63218 | gap 1, opp_overlap 699398, overlap 699403 TCAGACTAGCCGGGT CG-CGAC GTTC GTCGGCG TTTTGTTCCGCCAGA TERM 872 699565 - 699547 - G 74 -8 -4.03234 | overlap 699548 699558 TGCGGTTGAGATAAA CGCGGCAC AAA GCGCCGTG GTGAGCGCCATGCGC rlpA 700897 - 699752 - | rare lipoprotein A TERM 873 700063 - 700120 + g 100 -21.1 -3.43071 | gap 1, opp_overlap 700093, overlap 700089 700090 TCGCAGTCGCTGGAG CCGTCGCTGGAGCCGCCACCGGCG-CGG AAA CCGGCGCTGGCTGTGGCGCCGGCGTCGG TTCATTACTCTCCAG TERM 874 700090 - 700123 + g 72 -12.4 -2.55351 | opp_overlap 700093, overlap 700063 700089 CCGCCACCGGCGCGG AAACCGGCGCTGGC TGTGGC GCCGGCGTCGGTTC ATTACTCTCCAGCAC TERM 875 700114 - 700093 - G 71 -10.1 -3.53444 | opp_overlap 700063 700090 700089 CCACCGGCGCGGAAA CCGGCGC TGGCTGTG GCGCCGG CGTCGGTTCATTACT mrdB 702020 - 700908 - | cell wall shape-determining protein mrdA 703924 - 702023 - | penicillin-binding protein 2 TERM 876 702588 - 702601 + g 74 -2.3 -5.03747 | opp_overlap 702599, overlap 702599 ACCGGAATCGTATCG CCCTG ATAC CACGG TTTTTTAAAGCGTTT TERM 877 703324 - 703339 + g 72 -2.5 -4.85653 | gap 1, overlap 703321 703325 CGATGTCATGGGTGG C-GGCG TAGTT CGCCAG TTTGTTTTCTCTGTC TERM 878 703351 - 703367 + g 70 -8.7 -3.63843 | overlap 703352 703357 CCAGTTTGTTTTCTC TGTCGAG ACG CTCGACG TCTTTATCATTGATT TERM 879 703548 - 703561 + g 74 -2.3 -5.00616 | opp_overlap 703542 GAAGTAAAGCGATGG GATCG GGCG CGCTC TTTTTTAAAGGCGGC TERM 880 703865 - 703853 - G 78 -6.2 -4.80396 | CAAAATACCCAAAAA GGCG ACCAG CGCC CGACGCACAAACAGT ybeA 704422 - 703955 - | SPOUT methyltransferase superfamily protein ybeB 704743 - 704426 - | hypothetical protein TERM 881 704676 - 704703 + g 75 -7 -4.42386 | overlap 704677 TGAACATCTAAGGCG ATGATGTCCTGA CCTT TCAGGTCATCAA TTTTGTCGATAACAA TERM 882 704677 - 704702 + g 71 -10.5 -3.2511 | overlap 704676 GAACATCTAAGGCGA TGATGTCCTGA CCTT TCAGGTCATCA ATTTTGTCGATAACA TERM 883 704836 - 704848 + r 72 -10.5 -2.8655 | TTAACGCTAACCTTC CGGCG GGA CGCCG TGTAGTATACCTGAA TERM 884 704889 - 704901 + r 79 -10.5 -3.53761 | opp_overlap 704867 TACCGGGACTTATGT CGCCG GAT CGGCG TTTAAAACCAGATTA cobC 705680 - 705072 - | alpha ribazole-5'-P phosphatase TERM 885 705736 - 705757 + H 70 -2.3 -5.08824 | CCCCTGATTGCGCAA CGTTTTTTT CACT AAAATAGCG TTTTTTGGCTGGAGG TERM 886 706606 - 706626 + G 73 -8.9 -3.89346 | overlap 706596 GGTTACGGGAGGAGG GCGCCCGGT TTT ATCAGGCGC TTTGTCAGCTCCCCC TERM 887 706706 - 706734 + G 84 -8.7 -4.28548 | GCGAGAGGATATTGA TCTGCAGCGACGG TTG CTGACGCAGCGGA TTTTAATCCGTAGCT cobD 705777 - 706871 + | threonine-phosphate decarboxylase nadD 707487 - 706846 - | nicotinic acid mononucleotide adenylyltransferase TERM 888 707189 - 707179 - G 81 -8.2 -4.30719 | opp_overlap 707182 707186 CTGGCCGATAATAAA CGCC AGC GGCG CTTCGGGGCCCTGTT holA 708520 - 707489 - | DNA polymerase III subunit delta TERM 889 708357 - 708331 - G 73 -5.9 -4.45083 | gap 1, overlap 708332 GGCAGAGTGAGAAAA GCGATCCCCAGT CGGT ACTGG-GATCGA GAGTAAAAGCGTGGT TERM 890 708495 - 708461 - G 76 -12.2 -3.00923 | gap 1, opp_overlap 708461 708462, overlap 708454 GCCCAATAGCAGATA TGCCGCACGCAGCCC TTCATT GAGCTGCGCGCGG-A GTTGTTCAGGATACA rlpB 709110 - 708520 - | LPS-assembly lipoprotein RplB TERM 891 708557 - 708597 + g 76 -10.2 -3.74872 | overlap 708556 ACGCGTGCTGGCGTA GAGGCGGGCGCCGCCGTC TCATT GTCGGCGGTAGCCTCCTC TTTCGTCGCCTGAAT TERM 892 708625 - 708660 + g 74 -8.2 -3.98661 | opp_overlap 708614 AATATCCGCCGCGCG GACGCTGGTCAGCTTA CGAA TCAGCTGTTCAGCGGC TTTGTCGTACATCTC TERM 893 708879 - 708911 + g 75 -11.3 -3.3353 | overlap 708875 708883 AAATAGTCACCGTTC CAAGCCGCAGAGACG GAA CGTCTTTGCGCGTTG TGTCTTTATCAAGCA TERM 894 708883 - 708908 + g 80 -10.5 -3.80279 | gap 1, overlap 708879 708875 AGTCACCGTTCCAAG C-CGCAGAGACG GAA CGTCTTTGCGCG TTGTGTCTTTATCAA TERM 895 709052 - 709019 - G 84 -13.9 -3.05463 | ATCGTTTTCATTGAA GCCGGAACCTGCGTA GTGC TACGCAGATGCCAGC CGCATCCGGCGGTGA leuS 711707 - 709125 - | leucyl-tRNA synthetase TERM 896 710793 - 710804 + g 81 -3.6 -5.28778 | AATCGCTTTATAGCC GGTG TCGA CGCC TTTTTTCTCCATGGT TERM 897 710857 - 710897 + g 73 -5.2 -4.56597 | opp_overlap 710868, overlap 710858 710868 TTGGTGTTACGGCAT TCGTCGATGAACGCCGCC AGTTC GGCGTTGTTCGCCGCCGC TTTTTGCGCCAGCGG TERM 898 711362 - 711378 + g 76 -5.1 -4.8048 | opp_overlap 711362 AGTCATAGCCAAAAC CCAGC GTTTTTA GCTGG TTTTTCATATACGCG STM0649.S 711995 - 712285 + | putative hydrolase STM0650 712302 - 713474 + | putative hydrolas TERM 899 713482 - 713503 + F 75 -10.1 -3.54653 | opp_overlap 713482 713483, overlap 713483 CGTTCTGATACCAAA TCGGGCAGC ACAA GCTGTCCGG TTATCTCCTGGGAAT TERM 900 713483 - 713502 + F 73 -11.4 -2.72471 | opp_overlap 713483 713482, overlap 713482 GTTCTGATACCAAAT CGGGCAGC ACAA GCTGTCCG GTTATCTCCTGGGAA TERM 901 714096 - 714117 + G 85 -4.3 -5.22039 | opp_overlap 714096 CAAGTTTCTTAAACA GGGCAGCGT GGTA ACGATTCCC TTTTTTGCCTTTGGG STM0651 713524 - 714477 + | 2-keto-3-deoxygluconate permease TERM 902 714525 - 714497 - f 84 -8.2 -4.64861 | gap 1, opp_overlap 714503, overlap 714501 TCGGCGGAAAATAAA TCACGA-CGGGCG GTCT CGCCCGTTCATAA ACCAACAGGATGGTG TERM 903 714503 - 714518 + F 79 -11.8 -3.14132 | opp_overlap 714501 714497 GAAAATAAATCACGA CGGGCG GTCT CGCCCG TTCATAAACCAACAG STM0652 714545 - 716473 + | putative sigma-54 dependent transcriptional regulator ybeL 716566 - 717039 + | hypothetical protein TERM 904 717052 - 717075 + T 82 -13.2 -3.04263 | gap 1 TAAGGTTCATTATCG TGAGCGGACGG TTG CCGTCCGC-CA TGTTAAGCGTGCAGT ybeQ 718073 - 717078 - | TPR repeat-containing protein ybeR 718198 - 718905 + | putative cytoplasmic protein TERM 905 720274 - 720285 + G 76 -3 -5.09762 | overlap 720278 TTGGCCTCTGGCAGG TGAT TAAA ATCA TTTTATTTATTGGCG ybeS 718902 - 720335 + | putative molecular chaperone ybeU 720347 - 721042 + | putative cytoplasmic protein ybeV 721039 - 722511 + | putative molecular chaperone TERM 906 722541 - 722527 - T 88 -12.8 -3.65529 | opp_overlap 722527 ACAGGGGTAGTGAAA GCGCCG TTA CGGCGC TTTCGGCTCGTCAAT TERM 907 722527 - 722541 + T 88 -12.8 -3.62275 | opp_overlap 722527 ACAGGGGTAGTGAAA GCGCCG TTA CGGCGC TTTCGGCTCGTCAAT hscC 724212 - 722533 - | putative heatshock protein TERM 908 722745 - 722777 + g 82 -11.2 -3.77196 | opp_overlap 722743, overlap 722749 CGCGGGGATAAATTT TCAGCGCCAGCAGC CGCTC GCGGCTGGCGTCGA TTTGCTGCGTCGTCA TERM 909 722749 - 722773 + g 75 -12.8 -2.68279 | opp_overlap 722743, overlap 722745 GGGATAAATTTTCAG CGCCAGCAGC CGCTC GCGGCTGGCG TCGATTTGCTGCGTC TERM 910 723279 - 723259 - G 70 -8.9 -3.69283 | opp_overlap 723259 723270 CAATTTACCGAATAA GCGCACCGC GAT GCGTTGCAC CAGCGGCATCTGTGA TERM 911 723465 - 723489 + g 77 -8.6 -4.14392 | gap 1 GATAAAGCCAGCTCA TGCG-CAGCGG GGAG CTGCTGGCGCA TTTTGCGGCTTCAAC TERM 912 724281 - 724248 - R 86 -11.9 -3.51633 | gap 1, opp_overlap 724252 724255, overlap 724239 724252 724255 AGAGAGTTTATAGAA TAAAGAACACCAC-CC TCT GGCGTGGTGATCTTTA TCAATGTCACGCCTG TERM 913 724277 - 724252 - R 81 -8.3 -4.39329 | gap 1, opp_overlap 724252 724255, overlap 724248 724255 AGTTTATAGAATAAA GAACACCAC-CC TCT GGCGTGGTGATC TTTATCAATGTCACG TERM 914 724252 - 724277 + r 74 -8.3 -3.95073 | gap 1, opp_overlap 724252 724248 724255, overlap 724255 AGTTTATAGAATAAA GAACACCAC-CC TCT GGCGTGGTGATC TTTATCAATGTCACG TERM 915 724274 - 724255 - R 79 -8.6 -4.30793 | gap 1, opp_overlap 724252 724255, overlap 724252 724248 TTATAGAATAAAGAA CACCAC-CC TCT GGCGTGGTG ATCTTTATCAATGTC STM0660 725526 - 724288 - | putative cytoplasmic protein rihA 726493 - 725558 - | ribonucleoside hydrolase 1 TERM 916 726141 - 726162 + g 71 -4.3 -4.62336 | overlap 726142 GAGACGATGGTGACC GGTTGTGCG CTCT CGCGCAGCG TTTTTGCCATCAGCT TERM 917 726601 - 726580 - R 82 -13 -2.90714 | GTAAAGCGTGAGATA GCGCGCAC TCTGAC GTGCGCGC CGGGAAGATTAGTGC gltL 727335 - 726610 - | glutamate/aspartate transporter gltK 728009 - 727335 - | glutamate/aspartate transporter TERM 918 727410 - 727400 - G 72 -2.4 -4.92812 | TGATAACAAAATAAA CGGC GCC GGCG AACAGAATCATTTCG gltJ 728749 - 728009 - | glutamate/aspartate transporter TERM 919 728786 - 728770 - R 100 -12.3 -5.76949 | TACTCCGAAAAAAAA GGGTAGC AGC GCTACCC TCGAAGATTGTTGCC gltI 729835 - 728909 - | glutamate and aspartate transporter subunit lnt 731710 - 730172 - | apolipoprotein N-acyltransferase ybeX 732608 - 731730 - | putative transport protein TERM 920 731957 - 731932 - G 71 -9.9 -3.53343 | gap 1 AAGTGGGTGCCGAAA GCGTC-ATTGAA GTC TTCAATCGACGC CAGCGCGCGAATCGT TERM 921 732548 - 732561 + g 75 -3.8 -4.946 | GCTGGCTGAGTAGCA GGGA AAAAAA TCCC TTTTTACTGTTTACT ybeY 733239 - 732766 - | putative metalloprotease phoL 734321 - 733236 - | putative phosphate starvation-inducible protein TERM 922 734435 - 734403 - R 72 -4.8 -4.6955 | gap 1, overlap 734404 734405 GATGAAGAGAGAAAA TTG-CAAGGCCCGTC GGGC GACAGGCCATGACCA GGAAGCCCGACAGGC TERM 923 734440 - 734465 + r 74 -11.1 -2.88404 | gap 1, opp_overlap 734440, overlap 734439 734463 GGCCATGACCAGGAA GCCCGACAGGCG TAG CGCCA-TCGGGC ATTATTGCCTTTTCA TERM 924 734465 - 734440 - R 83 -13.3 -3.23216 | gap 1, opp_overlap 734439 734440 734463 GGCCATGACCAGGAA GCCCGACAGGCG TAG CGCC-ATCGGGC ATTATTGCCTTTTCA miaB 735911 - 734487 - | rRNA modification protein TERM 925 736671 - 736645 - g 86 -10.9 -4.14392 | gap 1, opp_overlap 736644 736645 CGTCAAGTGTGAAAA TGC-GCCAGGCG ACAG CACCTGGCAGCA GTTTACGCCAACGGG TERM 926 736684 - 736696 + G 71 -4.7 -4.62302 | overlap 736692 GCAGTTTACGCCAAC GGGGC CGC GCGCC TTTTTGCCGCTGTTC ubiF 736055 - 737230 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase STM0672 737872 - 737297 - | putative inner membrane protein TERM 927 738003 - 737976 - R 90 -13.6 -3.30597 | opp_overlap 737982, overlap 737982 ATAAACGCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTA AAGGTGGCTGGGGTA TERM 928 737982 - 737997 + r 93 -10.4 -4.60041 | opp_overlap 737982 737976 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTAAAGGTGGCT TERM 929 737997 - 737982 - R 100 -10.4 -5.1417 | opp_overlap 737982, overlap 737976 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTAAAGGTGGCT TERM 930 738907 - 738922 + r 83 -10.4 -3.82031 | opp_overlap 738907 TTTGCTATAAAAAAA GAGCCC CTAA GGGCTC TTTCGTCATCGTTAA TERM 931 738922 - 738907 - R 100 -10.4 -5.60993 | opp_overlap 738907 TTTGCTATAAAAAAA GAGCCC CTAA GGGCTC TTTCGTCATCGTTAA asnB 740603 - 738939 - | asparagine synthetase B TERM 932 739836 - 739856 + g 91 -6.8 -5.2189 | GGAGCGCTCCTGATC TTCGACGC GACGG GCGGCGAA TTTTTTGGTGATTGC TERM 933 739959 - 739974 + g 80 -5.4 -4.87665 | gap 1, overlap 739955 739958 CACGGATTCTTCCAG CGC-CTG GCG CAGCGCG TTTTTGTCGGTAACG nagD 741645 - 740893 - | UMP phosphatase TERM 934 741520 - 741543 + g 87 -8 -4.58395 | TTGCGATGGGTAATT GGTCAGCAGC ACCA GCGGCAGACC TTTTTCCAGAATCCC nagC 742912 - 741692 - | N-acetylglucosamine operon transcriptional repressor nagA 744071 - 742917 - | N-acetylglucosamine-6-phosphate deacetylase TERM 935 743276 - 743288 + g 70 -9.1 -3.66356 | CCAGACAAAGTTTGT CGCCT TTC AGGCG TTTGGCATTGCGAAT TERM 936 743718 - 743747 + g 73 -9.4 -3.80114 | gap 1, overlap 743720 GTGCGGATGTTTTTC CA-GGTATTCGCG CATGA CGCGAATGCCCTG TTTCATCAATTCGTC TERM 937 743720 - 743744 + g 72 -12.2 -2.68381 | overlap 743718 GCGGATGTTTTTCCA GGTATTCGCG CATGA CGCGAATGCC CTGTTTCATCAATTC TERM 938 744125 - 744093 - R 82 -7 -4.8048 | gap 1, overlap 744094 744097 CCCCGATATCAAAAA TTTACCGCCCCGC ATTGACTG GCGGGGCGG-AGA CAACATTACAGACCT TERM 939 744122 - 744097 - R 87 -14.7 -2.87672 | overlap 744093 744094 GATATCAAAAATTTA CCGCCCCGC ATTGACTG GCGGGGCGG AGACAACATTACAGA nagB 744931 - 744131 - | glucosamine-6-phosphate deaminase TERM 940 744163 - 744180 + g 74 -7.1 -4.37198 | opp_overlap 744165 TTTCTGCTTCTAATT CATTGAA ATAT TTCAATG TTTTAACTTTAAGTT TERM 941 745112 - 745132 + H 73 -7.7 -4.08394 | ACAAAAAACACCCGT TTAATTTGC GAG GCGAATTAA TTTTCCACACACTCT TERM 942 745231 - 745215 - H 100 -8.7 -5.58179 | overlap 745216 745228 CAGCACAATAAAAAA CGGCTTC AAA GAAGCCA TATCGGCGTCTCGTA TERM 943 745230 - 745216 - H 80 -10 -3.9328 | overlap 745215 745228 AGCACAATAAAAAAC GGCTTC AAA GAAGCC ATATCGGCGTCTCGT nagE 745258 - 747210 + | N-acetyl glucosamine specific PTS system components IIABC TERM 944 747292 - 747269 - f 84 -10.2 -3.88438 | opp_overlap 747269 TCACAGGAAACATAA GCGGCAGAGG GAAA CCTTCGCCGC TTTTTTTTACCGCAA TERM 945 747269 - 747292 + F 100 -11 -5.75342 | gap 1, opp_overlap 747269 TCACAGGAAACATAA GCGGCAGAGGG AAA CCTTC-GCCGC TTTTTTTTACCGCAA TERM 946 748316 - 748334 + G 74 -9.5 -3.724 | TTTCCGGTCTGCGCC GTCGCGG CTATA CCGCGGC TTCTATTCGTGAGTT TERM 947 748449 - 748437 - g 93 -10.5 -4.42639 | AGATCTGAACGAAAA CGCGC CGC GCGCG ATGGCGGTAATCGAT glnS 747421 - 749088 + | glutaminyl-tRNA synthetase TERM 948 749131 - 749147 + F 100 -11.5 -5.38951 | AAAATACCTTGTCAA CGCCGCG TTC TGCGGCG TTTTTTCTCTGCATT TERM 949 749614 - 749635 + G 75 -5.7 -4.57569 | overlap 749615 GGGGTGGATCGTTGT TCCGCAGGC GCAA GCCTCCGGC TTTTTCGACGACTCC ybfM 749534 - 750940 + | putative outer membrane protein TERM 950 750947 - 750973 + F 80 -12.2 -3.01712 | ATTTTCTGATGTCAG ATGCGGCAGGCT GCC GGCCTGCCGCGC TGTTGAGGAACGACC ybfN 750990 - 751322 + | putative lipoprotein TERM 951 751339 - 751365 + T 100 -13.7 -5.07107 | ACCCTGCCTTGCCAC CCACGGGCGAA TGTTT TCCGCCCGTGG TTTTTTCAGGCTTTA citA 752675 - 751371 - | citrate-proton symporter TERM 952 751945 - 751917 - G 90 -5.3 -5.18371 | gap 1 GGTGATAAAATAAAA CGTTG-TGGTGG TCATCG CCACCAGCAGCG TTCCGGCTGTAATAA TERM 953 752341 - 752304 - G 89 -13.4 -3.6279 | opp_overlap 752304, overlap 752305 AAATCCTTGTAATAA CCGGCCCAACAGCACC AACGCA GGCGCTGCCAGGCCGA TCGTTTGGTAGCCGG TERM 954 752340 - 752305 - G 83 -14.7 -2.77192 | opp_overlap 752304, overlap 752304 AATCCTTGTAATAAC CGGCCCAACAGCACC AACGCA GGCGCTGCCAGGCCG ATCGTTTGGTAGCCG citB 753865 - 752726 - | citrate utilization protein b TERM 955 753111 - 753089 - G 80 -4.7 -5.0538 | overlap 753091 CGGCAGGCTAAAAAA CGGGTAGGG CGCTT CCCAACCGG CGACGTAGTGATAGC STM0691 755255 - 753852 - | tricarballylate dehydrogenase TERM 956 753883 - 753896 + g 74 -9.5 -3.65991 | TGCGCCTCCTTGTGC GCCGC GCGG GCGGC TTCTATTCCCGCAAT TERM 957 754517 - 754501 - G 71 -10.1 -3.57674 | overlap 754499 ACGCGAGTACAAATA CCGCCGT CGT ACAGCGG CGCCCTGGCATCAAT TERM 958 754628 - 754618 - G 77 -8.2 -4.07687 | ACGCCCTGGTTAAAA CGCG TGC CGCG AATCAGGAAATTATC TERM 959 754655 - 754665 + g 81 -8.2 -4.36914 | opp_overlap 754642, overlap 754642 754641 TATCCGCGGGCCATT CGCC GCG GGCG TTTTCTCCCCAGGCC TERM 960 754904 - 754893 - G 90 -5.8 -5.24129 | overlap 754897 GCCGCCCATAAAAAA CGCA TTGG TGCG CGCAACGTGGAGCGC STM0692 756279 - 755353 - | putative transcriptional regulator TERM 961 755812 - 755831 + g 82 -5.6 -4.98672 | TTCTTCAAGGATCGG TCTGGCGC TCCA GCGCAGGA TTTTATCTTTTTGAA TERM 962 756375 - 756358 - R 100 -11.3 -5.39721 | opp_overlap 756358 GGAGGATATAAAAAA GCCAACC GGGC GGTTGGC TCTTCGAAAGATTTA TERM 963 756358 - 756375 + r 75 -11.3 -3.03635 | opp_overlap 756358 GGAGGATATAAAAAA GCCAACC GGGC GGTTGGC TCTTCGAAAGATTTA fur 756846 - 756394 - | ferric uptake regulator TERM 964 756968 - 756952 - R 75 -6.5 -4.55128 | ATGCCGAAATGAAAA CCGCAAG TCT CTCGCAG ATGTTAATAAAACTG fldA 757658 - 757128 - | flavodoxin FldA ybfE 758102 - 757809 - | LexA regulated protein TERM 965 758224 - 758186 - R 80 -13.1 -2.57244 | gap 1, opp_overlap 758188 758188 758189 758191, overlap 758182 TCAGCGAGGAAGCGA CGCCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA-G TTTTTAATCAGTTAG TERM 966 758188 - 758223 + r 77 -10.2 -3.45571 | opp_overlap 758186 758182, overlap 758188 758189 758191 AGCGAGGAAGCGACG CCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA GTTTTTAATCAGTTA TERM 967 758188 - 758224 + r 100 -10 -4.77157 | gap 1, opp_overlap 758186 758182, overlap 758188 758189 758191 AGCGAGGAAGCGACG C-CAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGAG TTTTTAATCAGTTAG TERM 968 758189 - 758222 + r 83 -13.7 -2.6662 | opp_overlap 758186 758182, overlap 758188 758188 758191 GCGAGGAAGCGACGC CAACGCCCGCGCGCG TAAT CGCGCACAGGCGATG AGTTTTTAATCAGTT TERM 969 758191 - 758220 + r 72 -10.5 -2.86601 | opp_overlap 758186 758182, overlap 758189 758188 758188 GAGGAAGCGACGCCA ACGCCCGCGCGCG TAAT CGCGCACAGGCGA TGAGTTTTTAATCAG ybfF 759006 - 758236 - | hypothetical protein TERM 970 759446 - 759457 + G 71 -7.2 -4.03093 | opp_overlap 759446, overlap 759437 GCCGAGCAGAAAAAA GCGG TCAA CCGC TTTATGCTGATTCTG TERM 971 759457 - 759446 - g 100 -7.2 -5.31275 | opp_overlap 759437 759446 GCCGAGCAGAAAAAA GCGG TCAA CCGC TTTATGCTGATTCTG seqA 759191 - 759733 + | replication initiation regulator SeqA TERM 972 760167 - 760157 - g 85 -2.4 -5.55769 | opp_overlap 760158, overlap 760159 GTCCATAACAAAAAA GGCG GCC CGCT GGCTGATGGTATTGT pgm 759758 - 761398 + | phosphoglucomutase TERM 973 761404 - 761392 - T 78 -6.2 -4.7078 | CGAAGTATTGAAAAA CGCC TGATG GGCG ATATGGAAGAAAAAG TERM 974 761440 - 761413 - T 77 -11.4 -3.1247 | opp_overlap 761419, overlap 761419 ATGGGCGATATGGAA GAAAAAGGAGCC TTAC GGCTCCTTTTTT GTATTAACGGCGCTG TERM 975 761434 - 761419 - T 100 -10.4 -5.12068 | opp_overlap 761419, overlap 761413 GATATGGAAGAAAAA GGAGCC TTAC GGCTCC TTTTTTGTATTAACG TERM 976 761419 - 761434 + T 100 -10.4 -5.47159 | opp_overlap 761419 761413 GATATGGAAGAAAAA GGAGCC TTAC GGCTCC TTTTTTGTATTAACG TERM 977 761455 - 761498 + T 79 -10.4 -3.50045 | gap 1, opp_overlap 761475 TGTATTAACGGCGCT GCGC-TTATCAGGCCTGTA AACCGCC TCCAGGCCGGATAAGGCGC TTGTGATATCTGACT STM0699 761998 - 761513 - | putative cytoplasmic protein TERM 978 762057 - 762027 - R 91 -11 -4.323 | opp_overlap 762056, overlap 762028 TTCAAAGAGTGAAAA TGCCCGGACTACCG TTA CCGCAGCCCGGGCG CGCCATCAGCCGTGT TERM 979 762056 - 762028 - R 90 -14.5 -3.18657 | overlap 762027 TCAAAGAGTGAAAAT GCCCGGACTACCG TTA CCGCAGCCCGGGC GCGCCATCAGCCGTG TERM 980 762056 - 762071 + r 70 -2.4 -4.91473 | opp_overlap 762027 TTACCGCAGCCCGGG CGCGCC ATCA GCCGTG TTTATTTTTCAATTC potE 763382 - 762063 - | putrescine transporter TERM 981 762220 - 762230 + g 74 -6.8 -4.25104 | opp_overlap 762220 AAGGCCACGAAGTTA GCGA CTT TCGC TTTTGATGACGGCAC speF 765577 - 763379 - | ornithine decarboxylase TERM 982 764459 - 764470 + g 84 -3 -5.29782 | GCGCGATTGCCCTTT GATA TGGC TATC TTTTTTATGGATCTG kdpE 767016 - 766339 - | DNA-binding transcriptional activator KdpE kdpD 769697 - 767013 - | sensor protein KdpD TERM 983 767179 - 767147 - G 76 -10.4 -3.63068 | opp_overlap 767146, overlap 767140 767137 767148 CGATAGCATGGCAAA TCGCCAGCCCCAGC CCCAC GCCGGGGACGGCGG ACTCTTTGTTGCCGC TERM 984 767178 - 767148 - G 79 -13.9 -2.7752 | opp_overlap 767146, overlap 767140 767137 767147 GATAGCATGGCAAAT CGCCAGCCCCAGC CCCAC GCCGGGGACGGCG GACTCTTTGTTGCCG TERM 985 768662 - 768634 - G 95 -14.5 -3.53563 | opp_overlap 768635 AGACGGTCGGCGAAA GCGTCACGTCGCC ACC AGCGTCGCGACGC CGGGCGGCCCATGAC TERM 986 768952 - 768962 + g 77 -4 -5.06414 | AAAATCGCATCGCGG GTAT GCC ATAC TTTTTCTTCGCCCGG TERM 987 768979 - 768997 + g 72 -11.7 -2.82516 | TTTTCTTCGCCCGGA TGCGCGC GCCAG GCGCGCA TCTGATCGTCCACGC kdpC 770278 - 769694 - | potassium-transporting ATPase subunit C kdpB 772335 - 770287 - | potassium-transporting ATPase subunit B TERM 988 770879 - 770914 + g 74 -11.1 -3.30441 | gap 1, opp_overlap 770872 770871 AGAAAATCGTCCACA CCGGCT-TCGGCGGCA ATCGC TGCCGCCGTCAGGCGG TTATCGCCAGTGATC kdpA 774035 - 772356 - | potassium-transporting ATPase subunit A TERM 989 773049 - 773062 + g 83 -8.1 -4.44046 | opp_overlap 773036 CAGGCTGCTGGCCAG CACGC CAAA GCGTG TTTCTTTACCCTCCA STM0707 774124 - 774035 - | putative outer membrane protein TERM 990 774110 - 774086 - G 70 -9.3 -3.72395 | opp_overlap 774091, overlap 774091 ATAACCTAAAAGTAA GAAAACCAGCA CGA TGCCGGTTATC ACGCCTGCACTCACA TERM 991 774105 - 774091 - G 91 -7.8 -4.89562 | opp_overlap 774091, overlap 774086 CTAAAAGTAAGAAAA CCAGCA CGA TGCCGG TTATCACGCCTGCAC TERM 992 774238 - 774227 - H 73 -2.2 -5.14894 | AAAAAAGTATAAAAA TGGC AAAG ACCA TTATTTAACTAATGA TERM 993 774631 - 774658 + G 70 -3.4 -4.71426 | gap 1, overlap 774633 TAAACCGGTATGGAT GGCGCAGGCTG AAAAAGC CA-CCTGCGAC TTTTATTAATCGCGA ybfA 774461 - 774667 + | putative periplasmic protein TERM 994 774708 - 774687 - f 80 -7.2 -4.60487 | opp_overlap 774694 GACCAGCCTGAAAAA CCGTCAGC CGCCAC GCTGGCGG TTTTTTTATGCGCCA TERM 995 774694 - 774708 + F 100 -11.4 -5.60993 | opp_overlap 774687 CTGAAAAACCGTCAG CCGCCA CGC TGGCGG TTTTTTTATGCGCCA TERM 996 775410 - 775398 - g 75 -6.2 -4.63218 | CCCGGTGGAAGAAAA CGCG GTCAT CGCG CAGCTACGTCAGTTT phrB 774778 - 776199 + | deoxyribodipyrimidine photolyase TERM 997 776204 - 776229 + T 77 -10.4 -3.4678 | opp_overlap 776192 776191 776204, overlap 776205 AAGGGGCGTGATACA GGCCCGGTAG CGCAAA CTACCGGGCA TTCTGCTATCAGGAT TERM 998 776229 - 776204 - T 74 -11.1 -2.87463 | opp_overlap 776204 776205, overlap 776192 776191 AAGGGGCGTGATACA GGCCCGGTAGC GCAA ACTACCGGGCA TTCTGCTATCAGGAT TERM 999 776205 - 776228 + T 83 -13.9 -2.67747 | opp_overlap 776192 776191 776204, overlap 776204 AGGGGCGTGATACAG GCCCGGTAG CGCAAA CTACCGGGC ATTCTGCTATCAGGA ybgH 777719 - 776238 - | POT family transport protein TERM 1000 777756 - 777774 + H 74 -6 -4.56969 | overlap 777742 CTGCGGCAAGAACGC GGCATTCT CAG ATAATGCC TTTCTTTGTGGGCTT ybgI 778048 - 778791 + | putative hydrolase-oxidase ybgJ 778807 - 779463 + | putative carboxylase ybgK 779457 - 780389 + | putative carboxylase ybgL 780379 - 781113 + | hypothetical protein STM0715 781437 - 781568 + | putative cytoplasmic protein TERM 1001 781686 - 781667 - g 70 -2.8 -4.74453 | gap 1, overlap 781668 GAAGAGATTGAAAAA CTG-CTGTC AGC GACCGACAG AATGCCCTTCCCGGA STM0716 781628 - 782194 + | putative phage integrase STM0717 782654 - 782989 + | putative inner membrane protein TERM 1002 783194 - 783210 + G 74 -2.9 -4.93318 | opp_overlap 783187, overlap 783198 GCCATCAACCCAGCT TCTGCTG TGG CAACAGG TTTTTCTGCGTTATC TERM 1003 783225 - 783237 + G 74 -2.6 -5.0133 | overlap 783213 GTTTTTCTGCGTTAT CCGC GGACA GTGG TTTTTTGCAGCAGTA STM0718 782991 - 783731 + | putative cytoplasmic protein TERM 1004 784185 - 784197 + G 70 -2.7 -4.78107 | ATTATGGTGCACGTT TATGG TCC TCATA TTTTTCATACTGATA STM0719 784017 - 785168 + | putative UDP-galactopyranose mutase STM0720 785165 - 786061 + | putative glycosyl transferase STM0721 786074 - 787207 + | putative glycosyl transferase TERM 1005 787679 - 787691 + G 71 -4.9 -4.58466 | ATCGGCAGTTTATGA TTATG TTG CATAA TTTTATCATTATACC STM0722 787336 - 788106 + | putative ABC transporter permease protein STM0723 788110 - 788820 + | putative ABC-type polysaccharide/polyol phosphate transport system ATPase component TERM 1006 789442 - 789425 - g 70 -3.4 -4.82756 | ATAGAATTAATAAAA CACTCT TAACCC AGAGCG AATTTAAAGATCGTT STM0724 788914 - 790692 + | putative glycosyltransferase STM0725 790885 - 791718 + | putative glycosyltransferase TERM 1007 792729 - 792748 + G 72 -3.6 -4.77036 | gap 1 GATGACTGATTGGCC GATGCACAG GAT TTG-GCATC TTTTTGGTGGTAAGA STM0726 791776 - 793671 + | putative glycosyl transferase STM0727 793739 - 793876 + | putative cytoplasmic protein nei 793925 - 794716 + | endonuclease VIII abrB 795817 - 794771 - | putative transport protein TERM 1008 794825 - 794808 - G 89 -9.1 -4.53303 | overlap 794809 TAGGTTGATATAAAA CGGGCCA CTGC TGGCCCA GTTAACAGAATGCTG TERM 1009 794824 - 794809 - G 73 -10.4 -3.315 | overlap 794808 AGGTTGATATAAAAC GGGCCA CTGC TGGCCC AGTTAACAGAATGCT TERM 1010 795950 - 795913 - RH 81 -8.3 -4.55016 | opp_overlap 795917, overlap 795914 795917 AGAAAAAAGGGAAAA TGTACCGGATGGCGAGG GTTG CGTCGCCATCCGGTTGT CAATTAACGCTTCAG TERM 1011 795949 - 795914 - RH 82 -11.8 -3.30569 | opp_overlap 795917, overlap 795913 795917 GAAAAAAGGGAAAAT GTACCGGATGGCGAGG GTTG CGTCGCCATCCGGTTG TCAATTAACGCTTCA TERM 1012 795946 - 795917 - RH 100 -17.9 -2.79535 | opp_overlap 795917, overlap 795914 795913 AAAAGGGAAAATGTA CCGGATGGCGAGG GTTG CGTCGCCATCCGG TTGTCAATTAACGCT TERM 1013 795917 - 795946 + rH 100 -17.9 -3.42056 | opp_overlap 795914 795913 795917 AAAAGGGAAAATGTA CCGGATGGCGAGG GTTG CGTCGCCATCCGG TTGTCAATTAACGCT gltA 797237 - 795954 - | type II citrate synthase TERM 1014 797044 - 797065 + gH 77 -10.9 -3.13906 | opp_overlap 797043 797044, overlap 797042 797050 CGATGCAACAAAATG CCTTCGTCG CCGT CGATGAAGG TGATTTTAGATTCGC TERM 1015 797200 - 797215 + Gg 77 -4.7 -4.85433 | AGTTCAATAGTAGTG TCACC AGTAAG GGTGA TTTTTGCCTTTGTAT STM0731 797197 - 797583 + | putative inner membrane protein TERM 1016 797591 - 797601 + FH 80 -5.4 -4.95758 | CCCCATAACTTTTAC GCAT TAT ATGC TTTTTCTGGTGTCGT sdhC 797992 - 798381 + | succinate dehydrogenase cytochrome b556 large membrane subunit sdhD 798375 - 798722 + | succinate dehydrogenase cytochrome b556 small membrane subunit TERM 1017 799339 - 799304 - g 74 -10.4 -3.59979 | gap 1, opp_overlap 799330 GTGGTGTACTTCAAA GCCCGCG-CGACGGT GCTGGCG ACCGGCGGCGCAGGC CGTATCTACCAGTCC TERM 1018 799399 - 799363 - g 71 -10.2 -3.21747 | gap 1, overlap 799375 CCAGTCCACCACCAA CGCTCACATCAACACCG GTGA CGGTGTCGGTATG-GCG CTGCGTGCCGGTGTC TERM 1019 799452 - 799506 + G 81 -12.7 -3.09516 | gap 1, opp_overlap 799488 GGCAGTTCCACCCGA CCGGCATCGCCGGGGCGGGCGTGCTG GTGA CAGAAGG-CTGCCGCGGCGAAGGCGG TTACCTGCTGAACAA sdhA 798722 - 800488 + | succinate dehydrogenase flavoprotein subunit sdhB 800502 - 801221 + | succinate dehydrogenase iron-sulfur subunit TERM 1020 801546 - 801568 + F 74 -10.6 -3.25823 | opp_overlap 801536, overlap 801547 801549 AACAAGTGAACCCCG GCACGCATAC AGC GTATGCGTGG TTAGTATCCACGGCG TERM 1021 801547 - 801567 + F 83 -14.1 -2.55351 | opp_overlap 801536, overlap 801546 801549 ACAAGTGAACCCCGG CACGCATAC AGC GTATGCGTG GTTAGTATCCACGGC TERM 1022 801549 - 801565 + F 74 -10.9 -2.81547 | opp_overlap 801536, overlap 801547 801546 AAGTGAACCCCGGCA CGCATAC AGC GTATGCG TGGTTAGTATCCACG TERM 1023 803191 - 803181 - g 79 -3.2 -5.1417 | CCAGAAAATCAAAAA GCAT CCG ACGC CGCGTAAAATCTACG kgd 801745 - 804546 + | alpha-ketoglutarate decarboxylase sucB 804561 - 805769 + | dihydrolipoamide acetyltransferase TERM 1024 806128 - 806104 - g 70 -2.7 -4.77157 | overlap 806116 TGAAGGTAGTAAAAA GCAAAGAAGAG ATT CGCGCCTTCGC GGAAAACTGGCTGGG TERM 1025 806337 - 806316 - g 78 -5.7 -4.72846 | opp_overlap 806318, overlap 806318 GTAGAGATCGAAAAA GTCGCGGAG GAAA CCCCGCATC TGATCCATAAAGTCG TERM 1026 806982 - 806969 - g 74 -9.5 -3.73068 | TCTGGAAGGCAACAA CGCCG AACT CGGCG CGAAGAAACTGGCTG sucC 805911 - 807077 + | succinyl-CoA synthetase subunit beta sucD 807077 - 807946 + | succinyl-CoA synthetase subunit alpha TERM 1027 807965 - 807949 - f 77 -3.5 -5.22137 | overlap 807950 807951 AATTATAAAATAAAA CTCGCTG TTC CTGCGGG AACAGATAAATGTCC TERM 1028 807996 - 808014 + F 100 -11.7 -5.33866 | overlap 808012 GTTTTCGACATGGTT GGCCACC TTTAC GGTGGCC TTTTTTATGGCTTTA TERM 1029 808118 - 808106 - f 70 -4.9 -4.39287 | TGAACTATAGGAAAA TAATG CCT CATTA AAAAAACATGGTGGA TERM 1030 809057 - 809077 + F 74 -5.5 -4.57341 | AACGCACAAAATGTT TAGCCTTAT CGA ATAAGTCTA TTTTTACAGGGGGTT TERM 1031 809800 - 809827 + G 73 -9.2 -3.77607 | gap 1, overlap 809801 809816 ACTATGTTGGGGACA TCTTCGGTGCGCC GCT GGC-CATCGAAGG TTTGATGGCCTTCTT TERM 1032 809816 - 809837 + G 76 -10.9 -3.7282 | overlap 809801 809800 CTTCGGTGCGCCGCT GGCCATCGA AGGT TTGATGGCC TTCTTCCTCGAATCC cydA 809529 - 811097 + | cytochrome d terminal oxidase polypeptide subunit I cydB 811113 - 812252 + | cytochrome d terminal oxidase polypeptide subunit II ybgT 812267 - 812380 + | putative outer membrane lipoprotein TERM 1033 812540 - 812567 + G 78 -12.1 -3.21416 | gap 1, opp_overlap 812546, overlap 812546 TATTTATGCGGTAAT GGACAAGCGCCC GTTAA GGGCGCTT-TCC TTCGTGATGGCGATA TERM 1034 812546 - 812562 + G 83 -10.8 -3.97042 | opp_overlap 812546, overlap 812540 TGCGGTAATGGACAA GCGCCC GTTAA GGGCGC TTTCCTTCGTGATGG TERM 1035 812562 - 812546 - g 73 -10.8 -3.41878 | opp_overlap 812540 812546 TGCGGTAATGGACAA GCGCCC GTTAA GGGCGC TTTCCTTCGTGATGG ybgE 812517 - 812798 + | hypothetical protein TERM 1036 812844 - 812819 - f 89 -9.1 -4.58685 | opp_overlap 812819 AAACCTCCTTAAAAA TATAGGGGCTT GCAT AAGCCCATATA TTTTTACTCTCCCTT TERM 1037 812819 - 812844 + F 93 -9.1 -4.82154 | opp_overlap 812819 AAACCTCCTTAAAAA TATAGGGGCTT GCAT AAGCCCATATA TTTTTACTCTCCCTT ybgC 813027 - 813431 + | acyl-CoA thioester hydrolase YbgC TERM 1038 813611 - 813651 + G 71 -11.2 -2.88544 | gap 1, opp_overlap 813611 TGGTCCGGAATCGAA CTATCGCGTCTGTACCAGG AAAG CCAGGGG-AGACGCGATAG TCTGTCGGGCTCGGA tolQ 813428 - 814120 + | colicin uptake protein TolQ tolR 814124 - 814552 + | colicin uptake protein TolR TERM 1039 814878 - 814865 - g 87 -8.1 -4.67556 | AGAAGAGCGTAAAAA GCTGC AACA GCAGC AAGCAGAGGAGCTGC TERM 1040 815068 - 815058 - g 85 -2.4 -5.46657 | GACGCGAAGAAAAAA GCGG AGG CCGA GGCGGCGAAAGCGGC TERM 1041 815338 - 815328 - g 83 -8.2 -4.45738 | GAGGCGAAGAAGAAA GCGG ATG CCGC GGCGGCGAAAGCGGC TERM 1042 815383 - 815373 - g 83 -8.2 -4.45738 | GAGGCGAAGAAGAAA GCGG ATG CCGC GGCGGCGAAAGCAGC TERM 1043 815443 - 815418 - g 100 -13.2 -4.45738 | overlap 815433 815434 815435 GACGCTAAGAAGAAA GCGGCTGCCG AAAAAG CGGCCGCCGC AGAAGGCGTCGACGA TERM 1044 815443 - 815433 - g 87 -8.2 -4.56597 | overlap 815418 815434 815435 GCGGCTGCCGAAAAA GCGG CCG CCGC AGAAGGCGTCGACGA tolA 814617 - 815840 + | cell envelope integrity inner membrane protein TolA tolB 815964 - 817256 + | translocation protein TolB pal 817291 - 817815 + | peptidoglycan-associated outer membrane lipoprotein TERM 1045 817879 - 817895 + G 100 -15.1 -4.25104 | TTACTGGTTGGCATA GCGGCCC CCT GGGCCGC TTTTGCTCAGGCGCC TERM 1046 818151 - 818133 - g 83 -10.2 -3.9392 | GGGGAGCTTAAATAA TGGCGGCG CAG CGCAGCCA GCAGCTGGTGACCAG ybgF 817825 - 818613 + | hypothetical protein TERM 1047 818615 - 818662 + F 90 -14.3 -3.15579 | opp_overlap 818614 TTAACGCGATGTAAT GCGTACCATGCGACCAGAAAA CGCCTT TTTTCTGGTCGCGTCGTGCGA TTCCTAAGCAGTTGA TERM 1048 818907 - 818892 - f 72 -9 -3.52941 | overlap 818889 818906 AAACGTGAAGGATAA CGTTGC GTCA GCAACG GCCTGTAGGGCGAGG TERM 1049 819508 - 819476 - f 71 -9.9 -3.19463 | opp_overlap 819477 819485, overlap 819477 819485 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATATGGAA TERM 1050 819477 - 819507 + F 87 -14.9 -2.90763 | opp_overlap 819476 819477 819485, overlap 819485 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATATGGA TERM 1051 819507 - 819477 - f 80 -13.4 -2.51464 | opp_overlap 819477 819485, overlap 819476 819485 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATATGGA TERM 1052 819485 - 819499 + F 100 -8.5 -5.24989 | opp_overlap 819485 819477 819476, overlap 819477 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 1053 819499 - 819485 - f 100 -9.2 -5.17576 | opp_overlap 819477 819485, overlap 819477 819476 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 1054 819663 - 819631 - f 71 -9.9 -3.19463 | opp_overlap 819632 819640, overlap 819632 819640 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATATGGAA TERM 1055 819662 - 819632 - f 80 -13.4 -2.51464 | opp_overlap 819632 819640, overlap 819631 819640 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATATGGA TERM 1056 819632 - 819662 + F 87 -14.9 -2.90763 | opp_overlap 819632 819631 819640, overlap 819640 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATATGGA TERM 1057 819654 - 819640 - f 100 -9.2 -5.17576 | opp_overlap 819632 819640, overlap 819632 819631 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 1058 819640 - 819654 + F 100 -8.5 -5.24989 | opp_overlap 819640 819632 819631, overlap 819632 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 1059 819818 - 819786 - f 71 -9.9 -3.19463 | opp_overlap 819787 819795, overlap 819787 819795 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCAATATGAAG TERM 1060 819787 - 819817 + F 87 -14.9 -2.90763 | opp_overlap 819786 819787 819795, overlap 819795 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCAATATGAA TERM 1061 819817 - 819787 - f 80 -13.4 -2.51464 | opp_overlap 819787 819795, overlap 819786 819795 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCAATATGAA TERM 1062 819795 - 819809 + F 100 -8.5 -5.24989 | opp_overlap 819787 819786 819795, overlap 819787 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 1063 819809 - 819795 - f 100 -9.2 -5.17576 | opp_overlap 819795 819787, overlap 819787 819786 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 1064 819859 - 819833 - f 70 -9.4 -3.36749 | opp_overlap 819835, overlap 819836 TATCTGCAATATGAA GATTCGAACCTG CCG CAGGTTCGGGTC TCATGCAGTGAGACA TERM 1065 819835 - 819857 + F 72 -10.6 -2.79796 | opp_overlap 819833 819836 TCTGCAATATGAAGA TTCGAACCTG CCG CAGGTTCGGG TCTCATGCAGTGAGA TERM 1066 819950 - 819964 + F 93 -9.2 -4.84527 | opp_overlap 819950 819949 819947 ACCAATGTAAAAGAG GGCGCT GGC GGCGCC TTTTTGCTATCTGCA TERM 1067 819988 - 820014 + F 85 -13.8 -3.09834 | opp_overlap 819988, overlap 819990 820001 ATCTGCAATATGGAA GATTCGAACCTG TCG CAGGTTCGGGTC TTGCCTGATGCGCTG TERM 1068 819990 - 820012 + F 73 -10.6 -3.10796 | opp_overlap 819988, overlap 819988 820001 CTGCAATATGGAAGA TTCGAACCTG TCG CAGGTTCGGG TCTTGCCTGATGCGC TERM 1069 821243 - 821196 - g 70 -9.9 -3.44848 | opp_overlap 821212 821240, overlap 821194 821198 GCGGCGCATGAAATA CAGGTTGATGCGGC-GCTACGCG AGGG CGCATTACTGCCGC-TCAACCGG ATGCTGGATTTTGCG TERM 1070 821241 - 821198 - g 74 -11.1 -3.29704 | opp_overlap 821212 821240, overlap 821196 821194 GGCGCATGAAATACA GGTTGATGCGGC-GCTACGCG AGGG CGCATTACTGCCGC-TCAACC GGATGCTGGATTTTG nadA 820233 - 821276 + | quinolinate synthetase TERM 1071 822011 - 821981 - g 82 -11 -3.85698 | opp_overlap 821983 821986, overlap 821983 CCGCCTGTGGATAAA CAGCGCGCGGGAGC GAG GATCGCGCGCGCTT TCCCGTTAATGGTGA TERM 1072 822009 - 821983 - g 89 -13.6 -3.51934 | opp_overlap 821983 821986, overlap 821981 GCCTGTGGATAAACA GCGCGCGGGAGC GAG GATCGCGCGCGC TTTCCCGTTAATGGT TERM 1073 821983 - 822009 + G 89 -13.6 -3.68244 | opp_overlap 821981 821983, overlap 821986 GCCTGTGGATAAACA GCGCGCGGGAGC GAG GATCGCGCGCGC TTTCCCGTTAATGGT pnuC 821301 - 822020 + | nucleoside/purine/pyrimidine transporter ybgR 822955 - 822017 - | zinc transporter ZitB TERM 1074 823043 - 823026 - R 100 -11.3 -5.54907 | opp_overlap 823025 823024 CTGATAAAATAAAAA GGAGAGC GAAA GCTCTCC CGTTATCAGACTTTT ybgS 823452 - 823066 - | hypothetical protein TERM 1075 823633 - 823647 + H 79 -2.1 -5.54894 | gap 1 TTAGATCCCATTTTT CGCTAC ATTT GT-GCG TTTTTTTCCTGAATT aroG 823772 - 824824 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1076 824899 - 824864 - T 74 -5.4 -4.57353 | opp_overlap 824828 824828 824868 824896, overlap 824866 824869 GTGCAGGATAGAAAA CATATTGGTCCGGTAA CAGC CTACCGGACCGGTATT ACCAATATTAATGTA TERM 1077 824897 - 824866 - T 71 -8 -3.89814 | opp_overlap 824828 824868 824896, overlap 824864 824869 GCAGGATAGAAAACA TATTGGTCCGGTAA CAGC CTACCGGACCGGTA TTACCAATATTAATG TERM 1078 824868 - 824895 + T 70 -9.9 -3.06315 | opp_overlap 824866 824864 824869 AGGATAGAAAACATA TTGGTCCGGTA ACAGCC TACCGGACCGG TATTACCAATATTAA STM0761 825463 - 824918 - | fumarate hydratase STM0762 826323 - 825478 - | fumarate hydratase TERM 1079 826515 - 826526 + G 74 -2.2 -4.99043 | overlap 826513 TAACTTAACCAGAGT TGCT GAGC GGCA TTTTGTTTCTCAACC STM0763.s 826453 - 827343 + | transcriptional regulator STM0764 828327 - 827344 - | transcriptional regulator TERM 1080 829773 - 829800 + G 73 -5.7 -4.49939 | TAGTTTGGTTTGTTT TATCGTTAGTA TGATTT TACTACCGATA TTTTATCCCTTCTAT STM0765 828571 - 829818 + | putative cation transporter TERM 1081 830035 - 830020 - g 76 -11.8 -3.05384 | GGTCCCGGTACCGAA GGCGGC ACCC GCCGCC GCGCCCGCGGACGAC dcoC 829868 - 830113 + | oxaloacetate decarboxylase subunit gamma TERM 1082 830518 - 830504 - f 77 -9.2 -3.92324 | opp_overlap 830503, overlap 830505 CCGCGCAATATGAAA CCGCCC TGC AGGCGG TGCGCAGCCACGGCG TERM 1083 830548 - 830505 - f 80 -12.5 -2.95073 | gap 3, opp_overlap 830503, overlap 830504 CGCGCAATATGAAAC CGCCCTGCAGGCG-GTGCGCAG CCA CGGCGCACACGCC--CAGGGCA CGCTCTCCTACACCA dcoB 831919 - 833220 + | oxaloacetate decarboxylase beta chain TERM 1084 833749 - 833768 + G 81 -12.8 -3.03124 | opp_overlap 833747, overlap 833738 CGTGCGCAGCATATC GCTGCCGG TTTA CCGGCGGC TGTTGCGGGATCAAC STM0769 833339 - 834037 + | putative cytoplasmic protein TERM 1085 834198 - 834219 + F 72 -8.7 -3.65996 | overlap 834197 834200 GTTGTCAGCAGCCTC AAGCGTGGA TGGC TCCACGCTG TCTTTGTCTATGGAA TERM 1086 834200 - 834217 + F 79 -11.3 -3.40481 | overlap 834198 834197 TGTCAGCAGCCTCAA GCGTGGA TGGC TCCACGC TGTCTTTGTCTATGG TERM 1087 834295 - 834238 - f 70 -9.5 -3.10597 | gap 3, opp_overlap 834241 834243 834254, overlap 834237 TTGTCTATGGAAAAC CCCCAGTCAGGCCCTGTCTCTTGATCAG GAGAT CTGATCAAGAGACAGGGC-T-A-TGCCG GAGGATATTTATTGG STM0770 834417 - 835496 + | putative ABC transport protein STM0771 835496 - 836272 + | putative ABC-type cobalamin/Fe3+-siderophore transport component TERM 1088 836292 - 836337 + T 100 -18.6 -3.29511 | gap 1, opp_overlap 836333 TATTGCCTGATGGCG CTGCGCTTATCCGGCCTAC CCATTGCTC GTAGGCCGGATAAG-GCAG TTATACCGCCATCCG TERM 1089 836383 - 836409 + T 72 -8.6 -3.74747 | TCGCTTTACCCTGAT TCGCCACGGCAG CCG CTTTCGCGGCGA TTTCGTCAGCGTTGC gpmA 837115 - 836363 - | phosphoglyceromutase TERM 1090 836744 - 836776 + g 76 -10.4 -3.62572 | ATCTTTGGTCAGTTC CGGCGGCGTCACGG CAAAA CCGCGGCGCCACTG TTTAACCTGCTCGTC galM 838379 - 837339 - | aldose 1-epimerase galK 839521 - 838373 - | galactokinase galT 840570 - 839524 - | galactose-1-phosphate uridylyltransferase TERM 1091 839975 - 840009 + g 72 -2.6 -4.83615 | opp_overlap 839973, overlap 839976 CGCTGGACATAATCC ACCAGCATTGGCGAGC GCT GCTCGGCGAAGTAGGC TTTTTGTAAACGATC TERM 1092 840271 - 840241 - G 70 -5.3 -4.38712 | gap 1, overlap 840242 840244 840246 840249 GTGATCGGGAGAAAA GCAGATCACGCGGC TGGT GCCGCGCGCGCT-C TGACAGCGCATCAGC TERM 1093 840264 - 840249 - G 72 -11.8 -2.76909 | overlap 840246 840244 840241 840242 GAGAAAAGCAGATCA CGCGGC TGGT GCCGCG CGCGCTCTGACAGCG TERM 1094 840463 - 840480 + g 83 -9.8 -4.09685 | AGACGGCGTTTCCTG CGCCCC CTGCCA GGGGCG TTTTGCGCGATGCGG galE 841597 - 840581 - | UDP-galactose-4-epimerase TERM 1095 841790 - 841776 - R 100 -12.8 -5.44119 | TTTATCCGAAAAAAA GGCGCG TTA CGCGCC TGGGAATGAAACGGA STM0777 842728 - 841820 - | putative inner membrane protein TERM 1096 842857 - 842897 + r 73 -7.5 -4.08689 | opp_overlap 842870, overlap 842870 TCTTAATAAAAGGAG AGTGGTTCCAGAATGGCGC GCG GCGCCATTCTGATAATACA TTTAATTATTGCATC TERM 1097 842870 - 842884 + r 79 -11.4 -3.44794 | opp_overlap 842870, overlap 842857 AGAGTGGTTCCAGAA TGGCGC GCG GCGCCA TTCTGATAATACATT TERM 1098 842884 - 842870 - R 77 -11.4 -3.29263 | opp_overlap 842870 842857 AGAGTGGTTCCAGAA TGGCGC GCG GCGCCA TTCTGATAATACATT modF 844374 - 842899 - | putative molybdenum transport ATP-binding protein ModF TERM 1099 843826 - 843855 + g 95 -14.3 -3.61517 | CAGGGTCATACCCGC CTGGTTCAACGCC GTCA GGCGTTGCGCCAG TTGTTGACGGGCGGT TERM 1100 844247 - 844213 - G 95 -15 -3.61398 | gap 1 CTCGCCTGTTAATAA CGGCAGTTCGCCCGC CAGCGC GCGGGCGAGC-GCCG ACTTCCCGCTCCCGT modE 845230 - 844442 - | DNA-binding transcriptional regulator ModE TERM 1101 844748 - 844764 + g 74 -7.9 -4.13767 | overlap 844736 GCTTTGCGCCGTCAG CGCGACT TTG AGCCGCG TTTTGCCGTCGGCCA TERM 1102 845279 - 845268 - H 71 -7.2 -4.18494 | overlap 845269 TATTGTGACTGAAAA GCGC GTCA GCGC AAAGCCGACCGCACA STM0780 845359 - 845508 + | hypothetical protein TERM 1103 845536 - 845519 - f 75 -9.8 -3.54424 | opp_overlap 845519 GCTGATTTCCCCAAA CGCCCG CTCAGT CGGGCG TTTTTGTTACTCAAG TERM 1104 845519 - 845536 + F 100 -9.8 -5.1356 | opp_overlap 845519 GCTGATTTCCCCAAA CGCCCG CTCAGT CGGGCG TTTTTGTTACTCAAG TERM 1105 845866 - 845904 + G 78 -12.2 -3.17529 | opp_overlap 845888, overlap 845865 845867 ATTCGCCTCCTCTTC AACGCTGGCGCGCCAGAT AGA AGCGGGCGCGCCGGCGGA TCTCTTCATCTCTGC TERM 1106 845867 - 845903 + G 85 -15.7 -2.50035 | opp_overlap 845888, overlap 845866 845865 TTCGCCTCCTCTTCA ACGCTGGCGCGCCAGAT AGA AGCGGGCGCGCCGGCGG ATCTCTTCATCTCTG TERM 1107 845970 - 845957 - g 85 -4.5 -5.26316 | overlap 845958 845959 GCAGCCGATAAAAAA GCGGT GGAT ACCAC GACGCGCGAAACATT modA 845675 - 846448 + | molybdate transporter periplasmic protein TERM 1108 846835 - 846853 + G 95 -8 -4.89852 | opp_overlap 846819 846830, overlap 846836 GCCGCCAGAACGCTG GGCGCCGG GCG CTGGCGCG TTTTTCTGACTATCA TERM 1109 846836 - 846852 + G 77 -11.5 -3.53188 | opp_overlap 846819 846830, overlap 846835 CCGCCAGAACGCTGG GCGCCGG GCG CTGGCGC GTTTTTCTGACTATC modB 846448 - 847137 + | molybdate ABC transporter permease protein modC 847140 - 848198 + | molybdate transporter ATP-binding protein ybhA 849017 - 848199 - | phosphotransferase TERM 1110 849447 - 849461 + G 83 -6.4 -4.84918 | GACCCATATTTCTAC CGATCA TCA TGGTCG TTTTGTCTTTGTCGG TERM 1111 850141 - 850123 - g 71 -4.5 -4.65895 | opp_overlap 850134 TTGCTGACGGAAAAA GGCCG TTATGCCGT CGGCC AGGGGCCAATGTGGG ybhE 849181 - 850176 + | 6-phosphogluconolactonase TERM 1112 850296 - 850262 - T 95 -13.5 -4.25104 | opp_overlap 850265, overlap 850263 850265 TTGCTTGCAGTAAAA CCACGGGCCGCCACA TCTGC TGCGGCGGCCCGTTT ATAAGCCTGAACCGG TERM 1113 850295 - 850263 - T 100 -17 -3.14848 | opp_overlap 850265, overlap 850262 850265 TGCTTGCAGTAAAAC CACGGGCCGCCACA TCTGC TGCGGCGGCCCGTT TATAAGCCTGAACCG TERM 1114 850293 - 850265 - T 100 -19.6 -3.13504 | opp_overlap 850265, overlap 850263 850262 CTTGCAGTAAAACCA CGGGCCGCCACA TCTGC TGCGGCGGCCCG TTTATAAGCCTGAAC TERM 1115 850265 - 850293 + T 100 -17.4 -3.87815 | opp_overlap 850265 850263 850262 CTTGCAGTAAAACCA CGGGCCGCCACA TCTGC TGCGGCGGCCCG TTTATAAGCCTGAAC ybhC 851603 - 850320 - | putative pectinesterase hutI 851841 - 853064 + | imidazolonepropionase TERM 1116 853585 - 853615 + G 85 -11 -4.0127 | overlap 853586 853595 GCCGTTTCGTCAACT GGCGCAGCTATGCG ACG CGCAGAGCCGCGCG TTTCATTATGCCTGT TERM 1117 853586 - 853614 + G 86 -14.5 -3.00039 | overlap 853585 853595 CCGTTTCGTCAACTG GCGCAGCTATGCG ACG CGCAGAGCCGCGC GTTTCATTATGCCTG hutG 853061 - 854002 + | formimidoylglutamase TERM 1118 854692 - 854704 + G 76 -9.1 -4.06419 | CGTCGTACAACCTGG TCCGC GTC GCGGA TTGTTTCTCACGCCC hutC 854047 - 854772 + | histidine utilization repressor TERM 1119 855699 - 855668 - f 75 -10.1 -3.60098 | gap 1, opp_overlap 855674 ACCCGCGAGGGGAAA GCCGTGTCCGTCGC CCTGT GCG-CGAACGCGGC GGATATCCTGCCGGA TERM 1120 857265 - 857277 + G 75 -6.9 -4.41348 | overlap 857266 AGGCATCAACGGCCT TCGCG CTG CGCGG TTTGTTTGAGGCACA hutH 856655 - 858175 + | histidine ammonia-lyase ybhB 858736 - 858260 - | putative kinase inhibitor protein bioA 860083 - 858794 - | adenosylmethionine--8-amino-7-oxononanoate transaminase bioB 860170 - 861210 + | biotin synthetase bioF 861207 - 862364 + | 8-amino-7-oxononanoate synthase TERM 1121 862816 - 862839 + G 73 -5.2 -4.56597 | opp_overlap 862821, overlap 862818 GCATGGCAGGCCGTC GATAATCGCG CTCA CGCGAATAGC TTTTTGCCGGAAGAG bioC 862348 - 863103 + | biotin biosynthesis protein BioC bioD 863096 - 863782 + | dithiobiotin synthetase TERM 1122 863804 - 863827 + F 88 -7.4 -5.00616 | opp_overlap 863796, overlap 863806 TTAAAAACTGCCTTC TTGCAGGATC AGAC GATCCTGCTG TTTTTTCGCCAGACC TERM 1123 863806 - 863825 + F 95 -12.2 -4.13561 | opp_overlap 863796, overlap 863804 AAAAACTGCCTTCTT GCAGGATC AGAC GATCCTGC TGTTTTTTCGCCAGA TERM 1124 864260 - 864246 - f 71 -10 -3.28712 | opp_overlap 864245 864244 CTGGTCTGGGGATAA CCAGCA CAC TGCTGG AATTTTACCCCGCGA TERM 1125 865192 - 865172 - g 70 -6.7 -4.14739 | overlap 865184 CTATCTATCCCAAAA CGCACTACG TAA CGCCGCGCG AGCGTATTCTGCAGG TERM 1126 865285 - 865269 - g 90 -12.3 -3.9461 | GCTGGCGAATAATAA GCTGCTC GAA GAGCAGC GATTAAGCCAGCGCA uvrB 864433 - 866454 + | excinuclease ABC subunit B TERM 1127 866472 - 866496 + F 87 -10.7 -4.17089 | ATGTGTCGATCGCCA GCGAGTCATCG TTA CCATGGCTCGC TTTTGAGAATTTCAG TERM 1128 866663 - 866626 - f 100 -16.6 -3.2653 | opp_overlap 866631, overlap 866631 TTAATCACAACTGAA GAAAATTAGCGTTGAG GCTGAA CCCAACGCTAATTTTC CCTCTCTCCTCGGCT TERM 1129 866631 - 866658 + F 83 -9.3 -4.26589 | gap 1, opp_overlap 866626 866631 CACAACTGAAGAAAA TTAGCGTTGAGG CTGAA CC-CAACGCTAA TTTTCCCTCTCTCCT TERM 1130 866658 - 866631 - f 100 -10.7 -4.73635 | opp_overlap 866631, overlap 866626 CACAACTGAAGAAAA TTAGCGTTGAG GCTGAA CCCAACGCTAA TTTTCCCTCTCTCCT slrP 866944 - 869241 + | leucine-rich repeat-containing protein TERM 1131 869299 - 869272 - T 85 -13.6 -2.95894 | gap 1, opp_overlap 869272, overlap 869264 869298 CAGAAGAGGGAGAGA GCCTGTTTAC-CC TTC GGTGTAAACAGGC TTCTGATAAGCGCAG TERM 1132 869272 - 869299 + T 90 -13.6 -3.40403 | gap 1, opp_overlap 869264 869272 869298 CAGAAGAGGGAGAGA GCCTGTTTAC-CC TTC GGTGTAAACAGGC TTCTGATAAGCGCAG ybhK 870241 - 869333 - | putative cytoplasmic protein TERM 1133 870281 - 870267 - H 70 -10 -3.049 | GAAGTCAAATAAGCA GCGCTA CAG TAGCGC AAGTCGCGGGTTTTC TERM 1134 871318 - 871343 + G 95 -5.9 -5.31275 | opp_overlap 871294 GATCCACCAGCTCCG CCAGCGCAGCG ATGG CCCGGCGCAGG TTTTTTGTCATCCCG moaA 870638 - 871627 + | molybdenum cofactor biosynthesis protein A moaB 871649 - 872161 + | molybdopterin biosynthetic protein B TERM 1135 872197 - 872187 - g 77 -8.2 -4.09509 | ATTAACCCATATAAA CGCC GCA GGCG AAGCGCACATGGTGG moaC 872164 - 872649 + | molybdenum cofactor biosynthesis protein C moaD 872642 - 872887 + | molybdopterin synthase small subunit MoaE 872889 - 873341 + | molybdopterin synthase large subunit TERM 1136 873583 - 873596 + G 71 -8.1 -3.79864 | overlap 873581 873582 TGGCTTAATTATTGC CCAGC TTGC GCTGG TGTTTGTTCTGTCGG ybhL 873389 - 874093 + | putative permease TERM 1137 874113 - 874131 + F 100 -10.3 -5.76949 | opp_overlap 874113 AGCGATCTCTTAAAA TCCTGGC CCTGC GCCAGGA TTTTTTTTAGGACTA TERM 1138 874131 - 874113 - f 87 -10.3 -4.09864 | opp_overlap 874113 AGCGATCTCTTAAAA TCCTGGC CCTGC GCCAGGA TTTTTTTTAGGACTA ybhM 874240 - 874947 + | putative integral membrane protein TERM 1139 875044 - 875074 + G 86 -9.9 -4.2558 | opp_overlap 875043 875042 GTGAAGCTAAAGACG TCACTCG-CGCCATT AAA AATGGCGGCGAG-GA TTTTAATAAGAAATG TERM 1140 875197 - 875209 + G 95 -5.5 -5.3104 | TTCTTGTGGGAGGTG TGTGC AGT GCGCA TTTTGTTTTTGATAA STM0809 874971 - 875579 + | putative inner membrane protein TERM 1141 875634 - 875618 - g 72 -2.1 -4.87626 | GGCTAACAGGAAAAA CACTGGC GGA GCTGGTG AAAAAAGGGCAGTTG TERM 1142 876063 - 876074 + G 78 -2.2 -5.252 | TTTTTCCCGCTTACA GATG AATA CGTC TTTTTTCTCAGCATA TERM 1143 876138 - 876112 - g 73 -5.9 -4.4009 | gap 1, opp_overlap 876112 TTTTACCGGATAAAA CGCGTTGT-GCT GGAA AGCGAAAACGCG TCTGCTTAAATTTAT STM0810 875587 - 876147 + | putative inner membrane protein ybhN 877112 - 876150 - | hypothetical protein ybhO 878353 - 877112 - | cardiolipin synthase 2 TERM 1144 877782 - 877796 + g 83 -7.8 -4.64676 | opp_overlap 877772 877769 AACAGCGCCTGCGCT TCGCCG GGG TGGCGA TTTTCTTCAGCCTGA TERM 1145 878168 - 878182 + g 80 -9.2 -4.07687 | TACTTCGGCTTTTAC GCCGCG CTG TGCGGC TTTTAGCAGAGCGGT ybhP 879108 - 878350 - | putative cytoplasmic protein TERM 1146 878535 - 878563 + g 74 -7.4 -4.08216 | gap 2, overlap 878535 878554 TGAATATCTCCTCCA GCCCGGCC-G-CGT TTA ACGGCGGGCCGGCC TTTTGCCGCCAGTCA TERM 1147 879250 - 879238 - H 70 -4.8 -4.46212 | overlap 879246 TGCTTCAGGAGAAAA GCCA TGAAG TGGC AACAACGCGTTCGTG TERM 1148 879551 - 879583 + G 85 -15.5 -2.65264 | overlap 879549 ATGTTTTACTGGCGC TGGCGGGGCTGGCTA TCC TGGCCGGGCCCGCCG TGGTCTCGCTACTGG ybhQ 879241 - 879651 + | putative inner membrane protein ybhR 880719 - 879613 - | putative transport protein TERM 1149 880785 - 880760 - R 74 -8.3 -3.9941 | gap 1, overlap 880761 880775 880776 GGCCTGATAAGCAAA GCGCATCAGGCA TAA TGCCGGATG-GC GGCGTGAACGCCTTA ybhS 881965 - 880835 - | putative transport protein ybhF 883694 - 881958 - | putative ABC-type multidrug transport system ATPase component TERM 1150 882436 - 882424 - G 79 -3.3 -5.24531 | overlap 882425 882428 ACGCCGGAGAAAAAA CGCAG GTT CTGCT CAACCGTCAGGTTGC TERM 1151 882871 - 882881 + g 74 -2.4 -5.03314 | TGGCGAATATCTGCT GCGG TCG CCTC TTTTTTCAGGATCAG TERM 1152 883352 - 883333 - G 71 -6.4 -4.23104 | opp_overlap 883333 GTAAATTCCAACAAA CGGGCAAA GGTC TTTTCCCG TATCTCGCCGGTAAC STM0818 884682 - 883687 - | hypothetical protein TERM 1153 883803 - 883817 + g 70 -7 -4.1196 | opp_overlap 883790, overlap 883796 883812 GATCGGTACGCAGAT CCGGCG TTT CGACGG TTTTCGGCGTAAATT ybiH 885356 - 884682 - | putative DNA-binding transcriptional regulator TERM 1154 886885 - 886870 - g 75 -6 -4.564 | AAGGCGAAACCAAAA CCGCGC ACAG GCGAGG GGAAAACCGCTGGCG TERM 1155 886929 - 886892 - g 74 -7.5 -4.14243 | overlap 886893 CAGGCGAGGGGAAAA CCGCTGGCGACAAAGCA CGTC CGCCGCGTCGCCCGCGC AGAATCACGCCTGCC TERM 1156 886928 - 886893 - g 72 -11 -3.08224 | overlap 886892 AGGCGAGGGGAAAAC CGCTGGCGACAAAGCA CGTC CGCCGCGTCGCCCGCG CAGAATCACGCCTGC rhlE 885586 - 886950 + | ATP-dependent RNA helicase RhlE TERM 1157 886994 - 886967 - f 78 -12 -3.03124 | gap 1, opp_overlap 886983 TTTTATCCGGCAACA TGCCCGGT-AGCG CGA CGCTTACCGGGCC TACGGACTATGCAAA TERM 1158 887404 - 887390 - g 78 -2.1 -5.27779 | GGGAAGAGCAAAAAA CACTG GTGGT CAGTA CCGCTAACGTGGCGT TERM 1159 888609 - 888598 - g 85 -2.2 -5.45802 | gap 1, opp_overlap 888599 888602, overlap 888599 GGCTTAAAAGAAAAA GCCGG CGA CCG-C TTTGTGGCGCTGGAT TERM 1160 888771 - 888757 - g 79 -2.8 -5.21709 | opp_overlap 888767 888768 CTGGAGAGCAAAAAA CATCAT GGT ATGCTG GTACTGTTCGCCAGC TERM 1161 889283 - 889273 - g 70 -3.2 -4.71222 | overlap 889279 889281 ATAGTAAAACCAAAA GCAA AAC CTGC ACGCCGCCGACGGCG dinG 887158 - 889302 + | ATP-dependent DNA helicase DinG TERM 1162 889285 - 889298 + F 71 -9.5 -3.24747 | opp_overlap 889281 889279 AAAGCAAAACCTGCA CGCCG CCGA CGGCG TTAATGCTGTGAGCA ybiB 889332 - 890306 + | hypothetical protein TERM 1163 890333 - 890312 - T 100 -13.7 -5.8187 | overlap 890291 TAGCGAATAAAAAAA GCCCGTCCA GTGA CGGACGGGC AAATAAGGGTAACAA ybiJ 890722 - 890462 - | hypothetical protein TERM 1164 890578 - 890613 + g 73 -6 -4.41844 | gap 1, overlap 890579 TAGCTTCCAGGCCAT CCAGCGTGGTGGC-GCC ATC GGCAGACACTACGCCGA TTTTATGCAGGTTTT ybiI 891273 - 891007 - | hypothetical protein TERM 1165 891342 - 891332 - H 70 -2.4 -5.0538 | overlap 891333 CGTCAGGCGAAAAAA TCGC ATC GCGC GGCCTTTTCAGACCA TERM 1166 892156 - 892170 + G 80 -9.2 -4.1552 | GAGCTATGGTGCGAA GGCGGC GAA GTCGCC TTTATTAAAAAAATG ybiN 891478 - 892404 + | putative SAM-dependent methyltransferase ybiO 894623 - 892401 - | hypothetical protein TERM 1167 892641 - 892616 - G 95 -14.1 -3.47349 | overlap 892609 TCGTTAAACTGACAA TACCGGCGAAC GTGG GTTCGCCGATA ATCAGCCCGCGAATA TERM 1168 893663 - 893675 + g 74 -3.3 -4.86385 | GACTTAATAAATGTT GCGTA ATC TCCGC TTTGTTTTTAAAGAT TERM 1169 894478 - 894491 + g 100 -3.7 -6.09888 | overlap 894477 894476 AGTACGTCAGCCAGG GCCGC ATAG GCCGC TTTTTTTTGTTCAGG TERM 1170 894619 - 894602 - G 84 -2.7 -5.39721 | gap 1, overlap 894603 CCAGTAGACAAAAAA GGATGAAC AGG GTCCA-CC GCATGACTCCTCCAG TERM 1171 894706 - 894737 + r 79 -12.2 -2.87211 | TGGGACTATTCCATG ATGCCCTTCCTGCC GCAG GGCTGGAAGGGCGA TATCTCAGGAGACGT glnQ 895464 - 894742 - | glutamine ABC transporter ATP-binding protein TERM 1172 894860 - 894846 - G 72 -2.1 -4.87665 | gap 1, opp_overlap 894846, overlap 894827 894849 CTTTATCGATAAAAA TCAGCC GTGA GGC-GA CTTTTTCGGCAAAGC TERM 1173 894866 - 894878 + g 70 -9.1 -3.76224 | opp_overlap 894827 CGTGAGGCGACTTTT TCGGC AAA GCCGA TTTCGTGAGTGACAA glnP 896120 - 895461 - | glutamine ABC transporter permease protein TERM 1174 896248 - 896208 - R 73 -9.9 -3.40597 | gap 3, overlap 896206 896209 TCCGTCACGGAAAGA GCT-GTAGGCCCGGTGAGCG TCCT CACT-ACCGGGCC-ACAAGC CAACATCAGGTCGTT glnH 897010 - 896264 - | glutamine ABC transporter periplasmic protein TERM 1175 896693 - 896713 + g 76 -3.2 -5.06451 | opp_overlap 896693 ACCGCTTTTGTAATA GCCATCGG AAAAG TCGATCGC TTTTTTACGCTCGTC TERM 1176 897350 - 897332 - R 76 -7.4 -4.19953 | opp_overlap 897332 TATTTAAGTGCAAAA CCCCTG TGCCAGG CAGGGG TATAGGGATGACTTA dps 897990 - 897487 - | DNA starvation/stationary phase protection protein Dps ybiF 899180 - 898293 - | threonine and homoserine efflux system TERM 1177 898838 - 898819 - G 74 -2.8 -4.9138 | gap 1, overlap 898820 898823 ACGACCCAAATAAAA TC-TACCGG CCG CCGGGATGA AAACAGCGCGACCGC TERM 1178 898975 - 898963 - G 70 -3.3 -4.72617 | opp_overlap 898963 898964, overlap 898964 CCATAAAACAATAAA GGCAG CCG CTGCT CTTTGGCAAAACGCA ompX 899534 - 900049 + | outer membrane protein X TERM 1179 900072 - 900089 + T 100 -9.1 -5.81412 | opp_overlap 900066 900072 GGTGAAAATGAAAAA TCCGCCT TTCG GGGCGGA TTTTTTTTGCCTGAA TERM 1180 900089 - 900072 - T 91 -8.4 -5.0925 | opp_overlap 900072, overlap 900066 GGTGAAAATGAAAAA TCCGCC TTTCGG GGCGGA TTTTTTTTGCCTGAA ybiP 901692 - 900112 - | putative integral membrane protein TERM 1181 901178 - 901167 - G 86 -7.2 -4.74103 | TGGCGAAGCGAAAAA CCGG ATAG CCGG TATCAATAACCTTAA TERM 1182 901668 - 901624 - G 75 -6.1 -4.62783 | overlap 901625 901627 901629 CAGCGACTGTAAAAA GTAGAGGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCCAGAAG TGAATCGATAAGGGT TERM 1183 901667 - 901625 - G 70 -9.6 -3.37188 | overlap 901624 901627 901629 AGCGACTGTAAAAAG TAGAGGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCCAGAA GTGAATCGATAAGGG TERM 1184 901665 - 901627 - G 78 -12.2 -3.25166 | overlap 901625 901624 901629 CGACTGTAAAAAGTA GAGGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCCAG AAGTGAATCGATAAG TERM 1185 901663 - 901629 - G 100 -19.2 -3.18433 | overlap 901627 901625 901624 ACTGTAAAAAGTAGA GGCCCGCCCACGGGCT TAC AGCCCGACGACGGGCC AGAAGTGAATCGATA TERM 1186 901920 - 901894 - H 100 -8 -5.77632 | overlap 901897 901898 AAAACCACAAAAAAA CAGGGGAAATGG GCG CCATTTCCGTTG AGGATGCAAAATAAA TERM 1187 901916 - 901898 - H 76 -11.8 -2.54537 | overlap 901897 901894 CCACAAAAAAACAGG GGAAATGG GCG CCATTTCC GTTGAGGATGCAAAA TERM 1188 901955 - 901936 - H 82 -7.8 -4.6951 | opp_overlap 901936 901935 901932 AGGATGCAAAATAAA GCGGCG TACCGCAC CGCCGC GTTATTTCGTGGAAG STM0835 902271 - 902744 + | manganese transport regulator MntR TERM 1189 903360 - 903374 + G 76 -2.8 -5.06414 | overlap 903361 TGGTGTGGAGTTGCC TGGCAT TAT ATGTCG TTTTTCTTACCGCGC ybiR 902741 - 903853 + | putative transporter TERM 1190 903882 - 903856 - T 100 -19.6 -3.03243 | opp_overlap 903846 903842, overlap 903859 ACTGATGCCGTAAGA GAAGCCCGATAG TAT CTATCGGGCTTC GCAGGCAGAGTCTGT TERM 1191 903879 - 903859 - T 100 -15.5 -3.66288 | opp_overlap 903846 903842, overlap 903856 GATGCCGTAAGAGAA GCCCGATAG TAT CTATCGGGC TTCGCAGGCAGAGTC ybiS 904817 - 903897 - | hypothetical protein TERM 1192 904077 - 904100 + g 74 -7.4 -4.15106 | gap 1 CACCTCAATGTAACG GCTACCGTCCG GCT CGG-TGGTGGC TTTTACCGGTTCATC TERM 1193 904369 - 904379 + g 85 -4.6 -5.15969 | overlap 904366 GCCGTAGGCGTCCAG GTCG GAC CGGC TTTTTTACGTTCAAC TERM 1194 906201 - 906178 - g 74 -7.4 -4.10453 | overlap 906179 TAAATGGTCGGAAAA CGCGCGTATT GGTT ACTACGCGCA GGACCACGAATATGA ybiT 905036 - 906628 + | putative ABC transporter ATPase component TERM 1195 906635 - 906667 + F 93 -15.7 -3.0263 | opp_overlap 906633 906629 ATCGAGTAAGTTATT GTCTGTAACCCCGAT AGC GTCGGGGTTACAGAA TGTTAACAAGGTAAT STM0839 907237 - 907980 + | putative inner membrane protein TERM 1196 908002 - 907985 - T 74 -8.4 -3.92075 | opp_overlap 907984 ATGCTCATTGAGAAA TCGGGG TAATTG CCCCGA CTCTCGTTAAAGTGT ybiV(2) 908728 - 908009 - | putative hydrolase TERM 1197 908904 - 908877 - R 73 -10.6 -3.02144 | gap 1, overlap 908896 GTAGGTCCGGTAAGA CGGGTGCGCCC AGACAAA GGGCGCACC-G CAGTTAAGCGGGCAG ybiU 910198 - 908933 - | putative cytoplasmic protein ybiV(1) 910460 - 911269 + | putative hydrolase TERM 1198 911291 - 911274 - T 77 -11.3 -3.14211 | opp_overlap 911276 ATCCCTTCTGATTAA CAGGCCT GCGT AGGCCTG TTAAACGTAGCGCCA pflF 913779 - 911347 - | putative pyruvate formate lyase TERM 1199 912031 - 912045 + g 80 -4.2 -5.00616 | TTGACCGATAACGCC CTGTTC GAA GACCAG TTTTTTCACAGCGGC TERM 1200 912437 - 912449 + g 76 -10.5 -3.64703 | CGATAACCCCATTTC CCGCC GAC GGCGG TTTCGATACAGCCGA pflE 914684 - 913785 - | putative pyruvate formate lyase activating enzyme TERM 1201 914918 - 914936 + r 71 -7.4 -3.98915 | opp_overlap 914918 TTATCTGTTGATACA GCACGG CCATAAA CCGTGC TTTGGTATGTTTATC moeB 915711 - 914962 - | molybdopterin biosynthesis protein MoeB moeA 916952 - 915711 - | molybdopterin biosynthesis protein MoeA ybiK 917149 - 918090 + | L-asparaginase TERM 1202 918128 - 918163 + G 74 -10.4 -3.53012 | opp_overlap 918159 GATGAACTGGATAGC CGCGATGTTCTGTCCG TCAG TGGCCTGAATATCGCG TTTCACCACGAAGGG TERM 1203 919739 - 919751 + G 71 -4.7 -4.59773 | overlap 919738 ATTGTTGAGATGGGG CCGCG GCG CGCCG TTTTTGAAAATCCGC yliA 918101 - 919972 + | glutathione transporter ATP-binding protein TERM 1204 920236 - 920223 - g 78 -2.3 -5.17576 | CATGAAGGTAAAAAA CGTCC TGGC GGAAG GCTATACCGTTTCTG TERM 1205 921485 - 921512 + G 70 -9.1 -3.71649 | ACAGTAAAAATTTGA CCGGTTTCTGG ATTATG CCGGATACCGG TTTCAGCTTTGACGA yliB 920005 - 921543 + | putative ABC transporter periplasmic binding protein TERM 1206 922008 - 922021 + G 87 -8.1 -4.66535 | overlap 921990 922016 GTTAGGAATGACGCT TGCCG TGAC CGGCA TTTCTTTTCCGGCTT yliC 921604 - 922524 + | putative ABC transporter periplasmic binding protein TERM 1207 923162 - 923196 + G 80 -5.1 -4.88918 | gap 1, opp_overlap 923169 GACGATTTTGTTTAG CCATATATTGCCGGGA ACGG TCTCGTCAAT-TGTGG TTTTCTTTACGATGC yliD 922527 - 923438 + | putative ABC transporter inner membrane component yliG 924854 - 923529 - | putative FeS oxidoreductase TERM 1208 925309 - 925334 + G 70 -5.3 -4.49556 | gap 1 CGCGCTGCGCCGTGC CGAAGGCGCGCT TGC AGC-CGCCGCCG TTTGTTTAATGAGCG bssR 925085 - 925468 + | biofilm formation regulatory protein BssR TERM 1209 926373 - 926358 - gf 70 -3.2 -4.81685 | AGTAATGATGAAAAA GTACTG ATTG CTGTAC GTGCAAAAATTGTAA STM0854 926181 - 926696 + | putative cytoplasmic protein STM0855 926614 - 927468 + | putative electron transfer protein beta subunit TERM 1210 927797 - 927781 - g 74 -2.1 -5.00616 | CTCTTTTGGAAAAAA CTGTGCG CCA CGCTTAG CAGCAAAACTTGATG STM0856 927479 - 928426 + | putative electron transfer protein alpha subunit STM0857 928720 - 929883 + | putative acyl-CoA dehydrogenase TERM 1211 930234 - 930246 + F 72 -4.9 -4.59212 | CCATTTCATCTGTTT TATCA CTA TGATA TTTATTTCATTGGTT STM0858 930332 - 932017 + | putative dehydrogenase STM0859 932913 - 932023 - | putative transcriptional regulator TERM 1212 932182 - 932205 + g 73 -6.1 -4.41047 | gap 1, opp_overlap 932182 ACGGGATGCAGCAGA GTGAGGCATT ATACC AATGCC-CAC TTTTGCTTCAACCAT TERM 1213 933174 - 933186 + r 80 -5.5 -5.00616 | GGTCATCAGGTTAAC CCGTT TAC AGCGG TTTTTTCAGCCCCGG STM0860 933603 - 933178 - | putative inner membrane protein TERM 1214 933458 - 933447 - G 70 -3 -4.76191 | AGACAGGAAAATAAA GTTT TACA AAAC CGATCAACTTATCCA yliJ 935253 - 934627 - | putative glutathione S-transferase TERM 1215 936287 - 936305 + G 77 -7.4 -4.2828 | CTGTCGTGCTGGGGG CGAAAACG GAC CGTATTCG TTTTAATGAGTCAGA dacC 935497 - 936699 + | D-alanyl-D-alanine carboxypeptidase fraction C TERM 1216 936704 - 936743 + T 100 -17.2 -3.18383 | gap 1, opp_overlap 936705 936706, overlap 936705 GGTTCTCGTAAAATA AC-TCCGTAGCCGGGTGCG CGT CGCATCCGGCTACGGGCGG TTAATACATCAGAGT TERM 1217 936740 - 936705 - T 100 -19.8 -4.17048 | gap 1, opp_overlap 936705 936704, overlap 936706 GTTCTCGTAAAATAA CTCCGTAGCCGGGTGCG CGT CGCATCCGGCTACGG-G CGGTTAATACATCAG TERM 1218 936705 - 936742 + T 100 -20.7 -2.50816 | gap 1, opp_overlap 936705 936706, overlap 936704 GTTCTCGTAAAATAA C-TCCGTAGCCGGGTGCG CGT CGCATCCGGCTACGGGCG GTTAATACATCAGAG TERM 1219 936740 - 936706 - T 100 -20 -3.09908 | opp_overlap 936705 936704, overlap 936705 TTCTCGTAAAATAAC TCCGTAGCCGGGTGCG CGT CGCATCCGGCTACGGG CGGTTAATACATCAG deoR 937502 - 936744 - | DNA-binding transcriptional repressor DeoR TERM 1220 937249 - 937265 + g 80 -4.3 -5.06414 | overlap 937241 937250 ACCAGGCCCGCAGCC AGCTGAG CGG CTCGGCG TTTTTCTTCCACCAG TERM 1221 937515 - 937560 + r 88 -5.5 -5.54264 | gap 1, opp_overlap 937523 937526, overlap 937523 937526 CATAGTTCCCCTGGA GAGTTAAAT-AAGCGCTCCGCA CCA TACAGAGCGCTTAATATTACTC TTTTTTTCGCTATTT TERM 1222 937551 - 937523 - R 100 -14.7 -3.70902 | opp_overlap 937515 937523 937526, overlap 937526 CCCTGGAGAGTTAAA TAAGCGCTCCGCA CCA TACAGAGCGCTTA ATATTACTCTTTTTT TERM 1223 937523 - 937551 + r 71 -10.3 -2.62118 | opp_overlap 937523 937526, overlap 937515 937526 CCCTGGAGAGTTAAA TAAGCGCTCCGCA CCA TACAGAGCGCTTA ATATTACTCTTTTTT TERM 1224 937548 - 937526 - R 95 -12 -3.98913 | opp_overlap 937523 937515 937526, overlap 937523 TGGAGAGTTAAATAA GCGCTCCGCA CCA TACAGAGCGC TTAATATTACTCTTT ybjG 938182 - 937574 - | undecaprenyl pyrophosphate phosphatase TERM 1225 938517 - 938543 + G 74 -2.9 -4.86133 | gap 1, opp_overlap 938514 ATCGTTTACAATCAG GCGGCAGGCTGG GACG TCAGGC-GCTGC TTTTTCCTCTCTGTC TERM 1226 939165 - 939148 - g 81 -4 -5.24129 | overlap 939149 GTTGGTGATAAAAAA CCGGCG GTTCGT CGCAGG GGCGTTAGCGCTGGG mdfA 938495 - 939727 + | multidrug translocase STM0867 940596 - 939781 - | putative hydrolase TERM 1227 940217 - 940227 + g 77 -8.2 -4.10161 | opp_overlap 940213 940216 CGATGATAATACATT GCCG CAA CGGC TTTTAACGCATCGTC TERM 1228 940252 - 940267 + g 86 -6.8 -5.00616 | ATCGTCGTAGCGTTT CAGCGT GTAG GCGCTG TTTTTTCCACAGGCG STM0868 941804 - 940593 - | putative transport protein/regulator TERM 1229 941890 - 941909 + H 100 -10.8 -5.03314 | TCATACTTCATTGTG CAGACAGT TTTT ACTGTCTG TTTTTTCAGCGTAAG STM0869 941972 - 942592 + | putative regulatory protein STM0870 944394 - 942709 - | hypothetical protein TERM 1230 943292 - 943280 - G 75 -4.1 -4.94058 | opp_overlap 943280 TGAATCGAAATAAAA CCAAT GCG ATCGG CGATGGTTTTTACGC TERM 1231 943452 - 943462 + g 71 -4.6 -4.57341 | overlap 943436 943435 943437 943457 CGAGGCGGCGACCGA CCGC ATT GTGG TTTTTCACCACAATT TERM 1232 943457 - 943475 + g 74 -7.5 -4.20516 | overlap 943437 943452 CGGCGACCGACCGCA TTGTGGT TTTTC ACCACAA TTTCTTCCGTCACGA ybjM 944665 - 945042 + | putative inner membrane protein TERM 1233 945070 - 945034 - T 90 -7.1 -5.41143 | overlap 945036 CACCGGCGAAAAAAA CGCCGATAGCGCCCTCC GTC AGAGGGCGTTGCCAGAG CAATCAGGCGAAAAG grxA 945337 - 945074 - | glutaredoxin 1 TERM 1234 945605 - 945644 + G 73 -10.7 -3.38604 | gap 1, opp_overlap 945628, overlap 945618 945622 GCTTAATCATTACCT TACGCT-GCCCGCGCCGT TCAAT ACGCCGCTGGCTGGCGTA TTGATGGTTTTCCTC TERM 1235 945618 - 945651 + G 84 -9 -4.26076 | gap 1, opp_overlap 945628, overlap 945605 945622 CTTACGCTGCCCGCG CCGTTCAATACGCCG CTGGC TGGCGTATTG-ATGG TTTTCCTCGGCGTCG TERM 1236 945622 - 945648 + G 76 -11.7 -3.13504 | opp_overlap 945628, overlap 945605 945618 CGCTGCCCGCGCCGT TCAATACGCCG CTGGC TGGCGTATTGA TGGTTTTCCTCGGCG ybjC 945507 - 945797 + | hypothetical protein mdaA 945781 - 946503 + | nitroreductase A TERM 1237 946513 - 946533 + F 73 -7.5 -4.19276 | CGCTAAAACCTGCGG GCCAGTGTA TGA TACGCGGGC TTTTCAGGGTTTTCA rimK 946561 - 947463 + | ribosomal protein S6 modification protein ybjN 947560 - 948036 + | putative cytoplasmic protein TERM 1238 948655 - 948673 + G 83 -7.3 -4.57569 | GCCAGTTTTCTTGAG CGCCAGC TCACC GCGGGCG TTTTTCAGCCGCTGG potF 948385 - 949497 + | putrescine ABC transporter periplasmic substrate-binding protein potG 949585 - 950718 + | putrescine transporter ATP-binding subunit TERM 1239 951219 - 951207 - g 73 -5.5 -4.59773 | GGGCATTTTGAAAAA CAACG GTG CGCTG AACAATGTGTTGCTG TERM 1240 951455 - 951469 + G 74 -4.9 -4.82901 | opp_overlap 951442, overlap 951450 AAGGCGGAATCATCG CCGGC TCGAT GCTGG TTTTTATCCCGGCGG TERM 1241 951544 - 951558 + G 71 -4.2 -4.65895 | overlap 951545 ATCATGATTGGTCGC GTCCTG TGG CAGGAG TTTTTCAATAACCGC potH 950728 - 951681 + | putrescine ABC transporter membrane protein TERM 1242 951971 - 951986 + G 71 -7.6 -3.96148 | TGGACGGTTTCGCGG CGCAAA CGGC TTTGCG TTTATGATCACCGCG potI 951678 - 952523 + | putrescine ABC transporter membrane protein TERM 1243 952553 - 952577 + F 71 -7 -4.07568 | overlap 952556 TCCACTATGGCAATG CGTTGCCGCG CGGGT CGCGGCATCA TTTTCAGGGAAGACA TERM 1244 952556 - 952574 + F 78 -11.7 -3.08032 | overlap 952553 ACTATGGCAATGCGT TGCCGCG CGGGT CGCGGCA TCATTTTCAGGGAAG TERM 1245 952791 - 952809 + G 81 -8.1 -4.23707 | overlap 952780 952779 AACCCTGGTCTTTCT GGCCAGC TTAGT GCTGGTC TTTGTTGAAATTTAT ybjO 952597 - 953070 + | putative inner membrane protein rumB 953113 - 954243 + | 23S rRNA methyluridine methyltransferase TERM 1246 954246 - 954256 + F 72 -2.6 -4.97405 | CAGGTCAATATAATC TATT CAC AATA TTTATTTTTATCCCT TERM 1247 954338 - 954289 - f 80 -6.2 -4.86001 | gap 1, opp_overlap 954290 954292 954296, overlap 954292 ACTATTTCATAAAAA TA-ATAAATACAATCAATTGATT ATTTA ATTCAATTGGTTGTATTTATATA TTACCCTATTTTTGC TERM 1248 954292 - 954334 + F 78 -11.7 -3.10901 | opp_overlap 954289 954292, overlap 954290 954296 ATTTCATAAAAATAA TAAATACAATCAATTGATT ATTTA ATTCAATTGGTTGTATTTA TATATTACCCTATTT TERM 1249 954334 - 954292 - f 90 -9.5 -4.53475 | opp_overlap 954292 954290 954296, overlap 954289 ATTTCATAAAAATAA TAAATACAATCAATTGATT ATTTA ATTCAATTGGTTGTATTTA TATATTACCCTATTT TERM 1250 954296 - 954330 + F 79 -8.1 -4.21142 | opp_overlap 954292 954289, overlap 954292 954290 CATAAAAATAATAAA TACAATCAATTGATT ATTTA ATTCAATTGGTTGTA TTTATATATTACCCT ulaA 954526 - 955869 + | ascorbate-specific PTS system enzyme IIC STM0885 955899 - 956219 + | putative inner membrane protein TERM 1251 956677 - 956659 - g 77 -4.4 -4.96501 | TTCCACAAAAACAAA CCGGAGGC GGC GTTTCCGG GCTATGGCGTCATGA TERM 1252 957688 - 957668 - g 75 -3.9 -4.93877 | overlap 957671 TTTGATGAAAGAAAA TGATGCTCC GGC GGAGCAGTA TCGCCGTCTGGGTCT TERM 1253 957685 - 957671 - g 70 -10 -3.34291 | overlap 957668 GATGAAAGAAAATGA TGCTCC GGC GGAGCA GTATCGCCGTCTGGG STM0886 956229 - 957716 + | putative sulfatase TERM 1254 957779 - 957796 + T 72 -9.1 -3.58343 | opp_overlap 957768 AGTATTAGTCCGAAT CGCCTGT TGAT GCAGGCG TTTGAGACTGATGAC artJ 958666 - 957935 - | arginine transport system component TERM 1255 958810 - 958784 - R 100 -10.9 -5.68039 | opp_overlap 958782 958781 AAATGGATAAAAAAA GACGGACAGGT TAACC ACTTGTCCGTC GGATTTATTCAATAT artM 959571 - 958903 - | arginine transporter permease subunit ArtM artQ 960287 - 959571 - | arginine transporter permease subunit ArtQ artI 961025 - 960294 - | arginine transport system artP 961771 - 961043 - | arginine transporter ATP-binding subunit TERM 1256 961959 - 961929 - R 71 -7.7 -3.97709 | gap 1, opp_overlap 961929 AGTAGGTAAGAAGAA TTGTC-GGCATCCC GGGC AGAATGCCAGACAA TTTACGGGGTTATGG ybjP 962516 - 962001 - | putative lipoprotein STM0893 963937 - 962612 - | putative integrase TERM 1257 963794 - 963818 + g 74 -7.9 -4.07568 | GGCCACCTTGCGATT TTTGGGGGT ATCAGGC ACCCCCAGA TTTTCACGAACACGC TERM 1258 963856 - 963874 + g 78 -6.7 -4.56775 | opp_overlap 963858, overlap 963858 TGTAGTGGAAGCAGA TACGGAG TTTGT CTCCGTG TTTTTCAACGCCGGT STM0894 964207 - 963965 - | putative excisionase STM0895.1n 964361 - 964215 - | hypothetical protein STM0895 964881 - 964573 - | hypothetical protein STM0896 965733 - 965341 - | hypothetical protein TERM 1259 965442 - 965470 + g 70 -6.7 -4.19238 | opp_overlap 965442 GCGTTTTGTTCGAAA TTTGTGCGGGACT AAA AGTCACTCGCAAA TTTTCAAGTTCCGGG STM0897 966725 - 966309 - | hypothetical protein TERM 1260 967814 - 967783 - R 84 -7.4 -4.78107 | opp_overlap 967783, overlap 967800 TACGATCACCAAAAA TGTCTGTCAAACAT AAAT ATGTGTTACAGACA TATAATAAGATTAAG TERM 1261 967875 - 967888 + r 79 -8.1 -4.36931 | opp_overlap 967875 TTAGATACAAAAAAA GAGCC GTAA GGCTC TTTTAATATCAGTTG TERM 1262 967888 - 967875 - R 100 -8.1 -5.76633 | opp_overlap 967875 TTAGATACAAAAAAA GAGCC GTAA GGCTC TTTTAATATCAGTTG STM0898 968606 - 967911 - | putative transcriptional regulator STM0898A 968719 - 968973 + | hypothetical protein STM0899 969473 - 969841 + | hypothetical protein TERM 1263 970901 - 970891 - g 75 -6.8 -4.49337 | overlap 970898 CAAGACCAACCAAAA GCGA AAT TCGC TGGCTGCAGGCGATC STM0900 969999 - 971582 + | putative helicase STM0901 971579 - 972547 + | putative phage DNA primase TERM 1264 972770 - 972758 - g 70 -2.7 -4.73108 | overlap 972759 TGGAGAAAATTAAAA TCTCT CCA AAAGA GGCCGGGGAACGGTA STM0902 972547 - 973407 + | hypothetical protein TERM 1265 973528 - 973555 + G 83 -9.8 -4.15044 | gap 1 CTATTGGTACCACCA GCAGCCGTGCGCG CTT CG-GCCTGGCTGC TTTCTTCGGAAAGGC STM0903 973404 - 974219 + | putative chaparone TERM 1266 974336 - 974351 + T 95 -7.5 -5.38249 | opp_overlap 974336 ATTAATTCTAAATCA CCCGC CACCGT GCGGG TTTTTTATGATTAAT STM0904 974766 - 974374 - | hypothetical protein TERM 1267 975195 - 975212 + H 100 -11.3 -5.00616 | opp_overlap 975181 975179 975195, overlap 975185 ATAGCGTGTCCCAAA GGCTCAC TTCG GTGAGCC TTTTTTACAGGCGAA TERM 1268 975212 - 975195 - H 82 -11.3 -3.53563 | opp_overlap 975185 975195, overlap 975181 975179 ATAGCGTGTCCCAAA GGCTCAC TTCG GTGAGCC TTTTTTACAGGCGAA TERM 1269 975252 - 975233 - H 100 -10.7 -5.45726 | TACAGGCGAAAAAAA GCCCGCT ACAGAG AGCGGGC ACCTGTATCGTCGCA STM0905 975824 - 976222 + | hypothetical protein TERM 1270 976410 - 976394 - f 89 -5.1 -5.78622 | TCAGGCGAAAAAAAA CGCCA AGGGAAG TGGCG GGCAGTAAATACTGA TERM 1271 976738 - 976753 + F 100 -9 -5.27023 | opp_overlap 976738 ATTACTTAAATCAAA GGCTAC TTCG GTAGCC TTTTCTTTTTCCACT TERM 1272 976753 - 976738 - f 79 -9 -4.08887 | opp_overlap 976738 ATTACTTAAATCAAA GGCTAC TTCG GTAGCC TTTTCTTTTTCCACT STM0906 976812 - 977156 + | hypothetical protein TERM 1273 977631 - 977641 + G 85 -4.6 -5.28176 | overlap 977618 GTCATGCCGCCCGAT CCGC AGC GTGG TTTTTTGTGACTAAA STM0907 977159 - 977773 + | putative chitinase STM0908 977770 - 978255 + | hypothetical protein TERM 1274 978492 - 978532 + F 73 -9.7 -3.3344 | opp_overlap 978501, overlap 978496 CAGTAGGTGAGATCA GGCATTACAGCAGCCCTTC AGT GAGGGGCTGCGATAATATC TTATGAAGGTTAGAT TERM 1275 978496 - 978528 + F 77 -11.3 -3.1789 | opp_overlap 978501, overlap 978492 AGGTGAGATCAGGCA TTACAGCAGCCCTTC AGT GAGGGGCTGCGATAA TATCTTATGAAGGTT TERM 1276 978523 - 978501 - f 82 -13.4 -2.81642 | opp_overlap 978496 978492 AGATCAGGCATTACA GCAGCCCTTC AGT GAGGGGCTGC GATAATATCTTATGA STM0909 979090 - 979581 + | hypothetical protein STM0910 979568 - 981676 + | hypothetical protein TERM 1277 982587 - 982597 + GF 72 -8.2 -3.83318 | opp_overlap 982586, overlap 982570 CGCCGTCTTAATCAG GCGC GCG GCGC TTCTCTTCTTGCCCC TERM 1278 983363 - 983348 - g 89 -3.2 -5.66989 | overlap 983351 TAAAGAGGAAAAAAA GGACCC TGAA AAGTCC ACCCAGGGCGATGGC STM0911 981876 - 983411 + | hypothetical protein TERM 1279 983844 - 983831 - gTf 77 -3.7 -5.03314 | TTTACGCCGAAAAAA CGGGG AAGT CACCG GACGATATTGCCGCG TERM 1280 984720 - 984704 - gTf 70 -6.5 -4.13767 | TTTCTGACTTCAAAA CCGCACA CCG TGTGGGG ATGGGGGGCTTTAAT TERM 1281 985093 - 985081 - gTf 74 -7.7 -4.09117 | CGTACCCAGAAAGAA GGTGA GCG TCACC TGAATATTCGCCCGG TERM 1282 985323 - 985338 + GTF 72 -10.4 -2.91264 | GGTGGCCTATCTCAA CGGCGT GGAT ACGCCG TATATCGATCAGCAG STM0912 983263 - 985449 + | ATP-dependent protease TERM 1283 985474 - 985485 + TF 91 -7.2 -5.50499 | ACAACTATCCGAATG GCCC GTCA GGGC TTTTTTTACGTCTGA STM0913 986134 - 985463 - | hypothetical protein TERM 1284 985522 - 985503 - Gf 75 -10 -3.55444 | TTTTTACGTCTGAAA TCCGGCCA TTCG TGACCGGA ACGGAGAAAATCATT TERM 1285 985681 - 985691 + gF 81 -8.2 -4.30576 | overlap 985668 985667 CACCGGGGACGGCAT CGCC CAC GGCG TTTTCCTGGTCCCCA TERM 1286 985901 - 985921 + gF 93 -16.1 -2.86164 | GATGGACGAGGTGAC GGCTGCCCG CTT CGGGCGGCC TGTCCTGATTGACGG STM0914 986133 - 986717 + | putative phage tail component STM0915 986714 - 987115 + | hypothetical protein STM0916 987126 - 987869 + | putative major tail protein TERM 1287 987883 - 987898 + F 86 -11.8 -3.53224 | AATTTTCTTATTCCT GCCCCG GCTC CGGGGC TTTGCGGGAAAAATC STM0916.1N 987914 - 988318 + | hypothetical protein TERM 1288 988358 - 988381 + GF 76 -11.7 -2.62616 | AACTGGCGCGGGAGT TCCGCCGTC CGGACT GGCGGCGGA TGCTGTCAGAAATGA STM0917 988336 - 988653 + | putative minor tail protein TERM 1289 989163 - 989142 - gf 74 -4.3 -4.7254 | overlap 989143 AGGTGGCAGCAAAAA CCCGGACCC TGAC GGATGCGGA GGCCGCCGCCACTAA TERM 1290 989629 - 989619 - gf 71 -6.8 -4.08945 | opp_overlap 989619, overlap 989608 ATTATGCCGGGAAAA CTGC CGG GCAG TTGCAGCAGATGGCC STM0918 988625 - 991786 + | putative minor tail protein STM0919 991786 - 992115 + | putative minor tail protein TERM 1291 992201 - 992213 + F 84 -7.7 -4.80396 | opp_overlap 992211, overlap 992211 992211 GGAATCTATCAGTCT GCACA AAA TGTGC TTTTTAAGTATTTTA STM0920 992242 - 992760 + | Ail/OmpX-like protein TERM 1292 992803 - 992818 + F 85 -6.1 -5.26316 | opp_overlap 992803 TCCGTACTATGTAAA CCCTC CGATGC GAGGG TTTTTTGTAAGCTCC TERM 1293 992852 - 992870 + F 100 -8.8 -6.06723 | opp_overlap 992851, overlap 992837 GGGGCGTAATCAATG CCACTTGC TAT GCACGTGG TTTTTTTTTACGGGA TERM 1294 992946 - 992935 - g 73 -5.8 -4.39386 | overlap 992936 992939 GCCAAACCACGAAAA CCGA GCAG TCGG CCCGCATTGATTTGT STM0921 992892 - 993587 + | putative minor tail protein TERM 1295 993983 - 994002 + GF 71 -4.2 -4.56597 | overlap 993984 GATGCGTACCATCTG GCCGGTAT TGAG ATGCCGGA TTTTTCGCGGGGAGA STM0922 993599 - 994333 + | putative phage tail assembly protein TERM 1296 994554 - 994575 + GT 74 -2.1 -5.00616 | overlap 994557 CCAGGTAGTGCTGGG TGCCGTGGC AATA GGCGCGTCA TTTTTTACGGCCGGC STM0923 994231 - 994908 + | putative phage tail assembly protein TERM 1297 994935 - 994911 - T 79 -8.5 -4.3739 | CATCGGTCGATAAAA CGAGCCGCC GGTCATG GACGGCCCG TGGAACAGTGCCTCA STM0924 995486 - 994962 - | putative CuZn superoxide dismutase TERM 1298 995584 - 995612 + H 79 -10.4 -3.53012 | gap 1, opp_overlap 995591, overlap 995585 995591 GCTAATATCTATTGA TGACAAA-CCGCC TCTG GGCGGTTTTGTCG TTTCAGAGGGAACAG TERM 1299 995585 - 995611 + H 76 -11.7 -2.71712 | gap 1, opp_overlap 995591, overlap 995584 995591 CTAATATCTATTGAT GACAAA-CCGCC TCTG GGCGGTTTTGTC GTTTCAGAGGGAACA TERM 1300 995591 - 995604 + H 93 -9.5 -4.61566 | opp_overlap 995591, overlap 995585 995584 TCTATTGATGACAAA CCGCC TCTG GGCGG TTTTGTCGTTTCAGA TERM 1301 995604 - 995591 - H 80 -9.5 -3.97947 | opp_overlap 995585 995584 995591 TCTATTGATGACAAA CCGCC TCTG GGCGG TTTTGTCGTTTCAGA STM0925.S 995631 - 999026 + | putative host-specificity protein TERM 1302 999037 - 999051 + F 100 -8.5 -5.60993 | opp_overlap 999037 999035 GTTAAATCATTAAGA GCCGC GTAAA GCGGC TTTTTTTATGGAGGC TERM 1303 999461 - 999406 - g 89 -13.8 -3.62597 | GCGATGGTGGAAGAA GTTGCCCGCCAGGCATCGGAGGCATC GCGG AATGCCACCGCCGCAGGGCAGGCATC TGAACAGGCGCAGAC TERM 1304 999632 - 999607 - g 73 -5.9 -4.4648 | ACGGCGACCACAAAA GCCGGGGAGGC ATCA GCCAGCGCGGC GTCGGCTGACACAGC TERM 1305 999909 - 999885 - g 70 -6.9 -4.08767 | overlap 999886 GGCAGCGTCGGAAAA GGCGGCAGCCG CAT CGGCAGCCGAA GCAAAAACATCTGAG TERM 1306 999931 - 999917 - g 74 -2.8 -4.87291 | CAGCCGAAGCAAAAA CATCTG AGA CAAACG CAGCAACGTCAGCAA STM0926 999070 - 1001442 + | putative minor tail protein TERM 1307 1001436 - 1001446 + F 71 -6.8 -4.13767 | CTACATAGTGAGGCT GGCA TAA TGCC TTTTAAAATGAGCAG STM0927 1001442 - 1002017 + | putative phage tail assembly protein TERM 1308 1002038 - 1002076 + T 100 -9 -5.32699 | opp_overlap 1002044, overlap 1002034 AATATAGCTATGTAG TAGAGACTGCTGCTATAT GTT ATATAGCAGCAATGGCTA TTTTTTGATGTTTAA TERM 1309 1002070 - 1002044 - T 82 -13.2 -2.95298 | opp_overlap 1002034 1002038 GCTATGTAGTAGAGA CTGCTGCTATAT GTT ATATAGCAGCAA TGGCTATTTTTTGAT nanH 1003326 - 1002088 - | neuraminidase TERM 1310 1002480 - 1002464 - G 77 -8.1 -4.07885 | opp_overlap 1002459 CATGTTTTTCCAAAA TCTTTTG TTT CAAAAGA ACGGCGGAGGCCAGA STM0929 1004271 - 1003900 - | putative inner membrane protein TERM 1311 1004458 - 1004444 - H 100 -11.4 -5.51402 | ATATATGCAAAAAAA GCCCAC AGG GTGGGC ATGAAATCGAACATC TERM 1312 1004614 - 1004633 + H 83 -2.1 -5.71983 | overlap 1004617 TTGTTGTAAGGTGAT TGACCGA TATCAT TCGGTGA TTTTTTTATAATTAA TERM 1313 1004884 - 1004896 + H 79 -9.1 -4.15044 | TGATGCACCTACTAC CGGTG ATG CACCG TTTGTTCCAGGAAAG TERM 1314 1005033 - 1005067 + H 95 -12.3 -4.13767 | ATCAGGAGGCTAATC GTGTTTGAGTTTGGT ATTCA ACCGGACTCAGACAC TTTTAAAGTAGGGAA orfB 1005367 - 1005690 + | hypothetical protein TERM 1315 1006274 - 1006289 + G 73 -5.4 -4.55287 | gap 1, overlap 1006268 TAGCGCCTGGCCTGA CGCC-CA GCG TGTGGCG TTTTATCTGGCTGGA ybjR 1005687 - 1006517 + | putative aminidase STM0932 1007527 - 1006514 - | putative nucleoside-diphosphate-sugar epimerase ybjT 1009056 - 1007623 - | putative nucleoside-diphosphate-sugar epimerase TERM 1316 1008143 - 1008156 + g 86 -3.8 -5.40014 | TCGTAGCCCCAGTCG CTGG AGTTCA CCAG TTTTTCTTCTTCTTT ltaA 1010068 - 1009067 - | L-threonine aldolase TERM 1317 1009413 - 1009423 + g 71 -8.2 -3.86202 | overlap 1009412 ACCATTTTACGCCAG CGCG TCG CGCG TTTAATGTAATCGCG TERM 1318 1009749 - 1009804 + g 83 -12.6 -3.16039 | GGCAGCGTACCGTCC GC-GGCGGCGTCGATGG-GCTGCGGCTG AATG CTGCCG-AGCACCGCCG-CGCCGCCAGC TTCATAGAGATAATT poxB 1011825 - 1010107 - | pyruvate dehydrogenase TERM 1319 1011221 - 1011246 + g 76 -3.2 -5.09173 | overlap 1011227 ATCAATGCGATATTG CTGGAGTAGC GCAGCA GTTGCGCCAG TTTTTTCAGCTCTTC TERM 1320 1011656 - 1011611 - G 83 -12.7 -3.25823 | opp_overlap 1011630 1011655 CCCGGTCCACATGAA CCGGCGCACACTGC-CAGCTC GCCGGT AAGCTGCGCT-TGTGCGCCGG CGGCGAAAGCGGCGA hcr 1012954 - 1011983 - | HCP oxidoreductase, NADH-dependent hcp 1014615 - 1012963 - | hydroxylamine reductase TERM 1321 1014421 - 1014409 - G 85 -6.9 -4.83615 | overlap 1014410 CAGCGTGGAGAAAAA CGCGC GCG GCGCA AAGTTATCAACGTCG ybjE 1015658 - 1014759 - | putative inner membrane protein TERM 1322 1015071 - 1015054 - G 70 -9.1 -3.62572 | opp_overlap 1015059 1015064 GAGTACCAGCCGAAA CCTGACG CCAT CGCCAGG GCGGTTTTTAGCGGT TERM 1323 1015498 - 1015478 - G 84 -6.1 -4.99435 | CGGAATAATGAAAAA TCGCCACCA GAT TACTGGCGA GGTTATCCAAAAACG TERM 1324 1016221 - 1016245 + G 70 -5 -4.42386 | gap 1, overlap 1016222 GCGAATGCGGCGCCG ATG-GCAGCGT GATG ACGCTGCGCAG TTTTCTCAATAGCGA TERM 1325 1016336 - 1016348 + G 80 -10.5 -3.87641 | overlap 1016344 GCCAGTGCTACGTTT GCGCG ATG CGCGC TTTATGCGACGTATT TERM 1326 1016639 - 1016628 - g 71 -7.2 -3.93695 | CGGATGATCGACAAA CCGG GCAG CCGG TCGCATCGGGTGATC TERM 1327 1016931 - 1016966 + G 70 -9 -3.73224 | gap 1, opp_overlap 1016939, overlap 1016944 CCGGGCGGGTTAAGC GCGGAAGATGGACGGCG CAT CGCCTTTCATAT-CCGC TTTAATCGCGCGTCG TERM 1328 1016944 - 1016954 + G 71 -8.2 -3.85114 | opp_overlap 1016939, overlap 1016931 GCGCGGAAGATGGAC GGCG CAT CGCC TTTCATATCCGCTTT ybjD 1015860 - 1017518 + | hypothetical protein ybjX 1018483 - 1017515 - | VirK-like protein TERM 1329 1017570 - 1017589 + g 85 -4.2 -5.14965 | gap 1 TCGAGTAATGCATAG CGGCGGCGA TAC TCGGC-CCG TTTTTTACTGGCGAT TERM 1330 1019010 - 1018982 - g 76 -10.3 -3.64822 | AGCCGCTGAGTTAAA GCTGGCGCG GGTTACGCTGG CGCGCCAGC AGCAGTTAGCTAAGA ybjY 1018611 - 1019729 + | macrolide transporter subunit MacA TERM 1331 1021561 - 1021576 + G 86 -6.8 -5.0916 | overlap 1021562 CGGTTTTTCACTGAC TGCGCT GGCG AGCGCG TTTTTATGTTCGACG ybjZ 1019726 - 1021672 + | macrolide transporter ATP-binding /permease protein TERM 1332 1021765 - 1021745 - T 100 -12.6 -5.27335 | opp_overlap 1021745 GGCGTTAAATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTCCTGGAT TERM 1333 1021745 - 1021765 + T 95 -12.6 -4.21462 | opp_overlap 1021745 GGCGTTAAATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTCCTGGAT cspD 1022023 - 1021802 - | stress response protein TERM 1334 1021876 - 1021894 + g 70 -8.8 -3.63305 | opp_overlap 1021877, overlap 1021877 CCTGGTGGACATCAA ACCGGACA GAC TGTCCGGC TTTAAGCGTTCTGTA TERM 1335 1021893 - 1021877 - G 86 -12.3 -3.83026 | opp_overlap 1021876 1021877 CTGGTGGACATCAAA CCGGACA GAC TGTCCGG CTTTAAGCGTTCTGT TERM 1336 1021877 - 1021893 + g 72 -12.3 -2.77501 | opp_overlap 1021877, overlap 1021876 CTGGTGGACATCAAA CCGGACA GAC TGTCCGG CTTTAAGCGTTCTGT TERM 1337 1022459 - 1022469 + G 75 -6.8 -4.45738 | opp_overlap 1022459 TCAATGATGACTACA CTCC GAT GGAG TTTGTTATTGACGTG TERM 1338 1022588 - 1022557 - g 71 -8 -3.79043 | gap 1, overlap 1022552 CACTATCAAGGCAAA GCCATCTGCGGCG TGTTTAC CGCCG-AGGTGGC GGAAACCAAAGTGGC clpS 1022347 - 1022667 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1339 1023300 - 1023277 - g 73 -5.2 -4.56775 | opp_overlap 1023277 1023280, overlap 1023280 ATTGGTCGTGAAAAA GAACTGGAAC GCGC GATCCAGGTC TTGTGTCGTCGCCGT TERM 1340 1023297 - 1023280 - g 70 -5.5 -4.40561 | opp_overlap 1023280 1023277, overlap 1023277 GGTCGTGAAAAAGAA CTGGAAC GCGC GATCCAG GTCTTGTGTCGTCGC TERM 1341 1023370 - 1023359 - g 74 -7.2 -4.07568 | CCGGCGTCGGCAAAA CGGC GATT GCCG AAGGGCTGGCCTGGC TERM 1342 1023638 - 1023622 - g 73 -9.4 -3.7795 | GCAAATCTGATTAAA CCGCTG CTTTC CAGCGG TAAGATCCGGGTGAT clpA 1022698 - 1024974 + | ATP-dependent Clp protease ATP-binding subunit TERM 1343 1025015 - 1024998 - f 80 -9.8 -3.86346 | opp_overlap 1024998 TCACTGTCGTACAAA CCGGGC CTTAGC GCCCGG TTTTTTTGTCTATGG TERM 1344 1024998 - 1025015 + F 100 -9.8 -5.76633 | opp_overlap 1024998 TCACTGTCGTACAAA CCGGGC CTTAGC GCCCGG TTTTTTTGTCTATGG TERM 1345 1025053 - 1025035 - f 100 -16 -4.18018 | opp_overlap 1025025 TTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA_1 1025166 - 1025624 + | transposase TERM 1346 1025703 - 1025727 + T 90 -9.9 -4.41348 | opp_overlap 1025706, overlap 1025705 1025706 ATAGGCGCATCTGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTACGCCGGA TERM 1347 1025705 - 1025725 + T 93 -12.5 -3.81557 | opp_overlap 1025706, overlap 1025703 1025706 AGGCGCATCTGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTACGCCG TERM 1348 1025706 - 1025724 + T 93 -16 -2.88452 | opp_overlap 1025706, overlap 1025705 1025703 GGCGCATCTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTACGCC TERM 1349 1025724 - 1025706 - T 100 -16 -4.62069 | opp_overlap 1025706 1025705 1025703 GGCGCATCTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTACGCC TERM 1350 1025860 - 1025841 - T 100 -8.6 -5.49809 | opp_overlap 1025841 1025839 CAAATGCGAAAAAAA GTCCGTAC TTTC GTACGAAC TCTTTCTTGAATATG TERM 1351 1026018 - 1026028 + T 76 -4.6 -4.96848 | AGCTCTGTTCAAAAA CGCT CCC GGCG TTTTTGTGTCGAACC STM0947 1026770 - 1026087 - | putative integrase TERM 1352 1026119 - 1026155 + g 100 -16.1 -3.53224 | opp_overlap 1026126, overlap 1026121 1026126 TGACAGTTTTTTGTC TGTAAAACGCCTGATGA ACA TCATCGGGCGTTTTGTA TTTCAGGGCCAGGTG TERM 1353 1026121 - 1026153 + g 100 -16.5 -3.34398 | opp_overlap 1026126, overlap 1026119 1026126 ACAGTTTTTTGTCTG TAAAACGCCTGATGA ACA TCATCGGGCGTTTTG TATTTCAGGGCCAGG TERM 1354 1026126 - 1026148 + g 100 -14.2 -4.78848 | opp_overlap 1026126, overlap 1026121 1026119 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG TERM 1355 1026148 - 1026126 - G 91 -12 -4.07568 | opp_overlap 1026126 1026121 1026119 TTTTTGTCTGTAAAA CGCCTGATGA ACA TCATCGGGCG TTTTGTATTTCAGGG STM0948 1027342 - 1026941 - | putative cytoplasmic protein TERM 1356 1027429 - 1027410 - R 100 -10 -5.79526 | opp_overlap 1027408 1027410 ATATGTGAAAAAAAA GCCCGTAC TTTC GTACGAGC TCTTTCTTGAATATG TERM 1357 1027672 - 1027649 - R 95 -13.2 -3.69364 | gap 1 ATGCAATAGACATAA TCCCCGC-CCA AAC TGGCGCGGGGA GGCAAATTAACGCTG STM0950 1028356 - 1027679 - | SlsA STM0951 1029236 - 1028376 - | putative cytoplasmic protein TERM 1358 1029044 - 1029071 + g 85 -7 -4.8622 | gap 1, opp_overlap 1029043 1029044, overlap 1029043 TCACGGTCTCGAAAC CGCGGTG-TGG ATGCTCC CCAACGCCGCG TTTTTCATTACCCGG STM0952 1029345 - 1030256 + | putative transcriptional regulator TERM 1359 1030310 - 1030294 - T 100 -10.1 -5.10497 | opp_overlap 1030294 AATGGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTATCCAGCCGCC TERM 1360 1030294 - 1030310 + T 76 -7.9 -4.36914 | opp_overlap 1030294 AATGGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTATCCAGCCGCC infA 1030565 - 1030347 - | translation initiation factor IF-1 STM0954 1030876 - 1030493 - | putative inner membrane protein TERM 1361 1030910 - 1030863 - GR 89 -2.8 -5.46657 | gap 1, overlap 1030864 CACCCCAATAAAAAA TGTGCCGAAAACATTCACTTCCG GGG CAAAAAT-AATGTCCGCGGCACC CAAAAACGGGAGGCC aat 1031581 - 1030877 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1362 1031079 - 1031068 - G 74 -2.2 -5.05782 | gap 1, opp_overlap 1031069, overlap 1031069 ATTCAGCGCAAAAAA CCAGC AGT GC-GG TTTTAGAGGCATTCT cydC 1033347 - 1031626 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1363 1032520 - 1032502 - G 86 -9.5 -4.27117 | opp_overlap 1032514, overlap 1032479 CGCGCAGAAGACAAA CAGCGCG ATGAG CGCGCCG GGCTGCGTATTGCCG cydD 1035114 - 1033348 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1364 1033403 - 1033388 - G 91 -11.8 -4.12599 | opp_overlap 1033388, overlap 1033378 AATAACGTCGCAAAA GCGCCG TTGG CGGCGC TGAGTTCAGCATAAC TERM 1365 1033388 - 1033403 + g 71 -11.8 -2.53263 | opp_overlap 1033378 1033388 AATAACGTCGCAAAA GCGCCG TTGG CGGCGC TGAGTTCAGCATAAC TERM 1366 1033959 - 1033983 + g 70 -9.9 -3.41051 | AGCTTTTACCGGAAC CGCTGCGTCCT ACC AGGACGGCGCG TTCTCCTGCCGCTAA TERM 1367 1034368 - 1034353 - G 73 -5.4 -4.63184 | overlap 1034340 AAGCGAGGTGAAAAA TTCCAG CACG CCGGAA GATAAAAAGGCGAGG TERM 1368 1034387 - 1034377 - G 74 -2.4 -5.0916 | GCCGGAAGATAAAAA GGCG AGG CGCA GTACTTCCATCGTGC TERM 1369 1034528 - 1034504 - G 75 -5.8 -4.65078 | gap 2 AGACGGTCAAGAAAA TGGCCGCTTAGC CGG GC-AAGC-GCCA GGAAATTGCGGCGGT TERM 1370 1035181 - 1035197 + r 100 -12.3 -5.52347 | opp_overlap 1035181 CGACGCAAAAATAAA GGCGACT TAT AGTCGCC TTTTTTACTTTTGTT TERM 1371 1035197 - 1035181 - R 100 -12.3 -4.89063 | opp_overlap 1035181 CGACGCAAAAATAAA GGCGACT TAT AGTCGCC TTTTTTACTTTTGTT trxB 1036196 - 1035228 - | thioredoxin reductase lrp 1036742 - 1037236 + | leucine-responsive transcriptional regulator TERM 1372 1037290 - 1037326 + F 95 -11.6 -4.13767 | gap 1, opp_overlap 1037292 1037296, overlap 1037293 1037296 TCCTGTTAATCCATA CAG-CAACAGTGCCGGG GCAA CCCGGTGCTGTTGTCCG TTTTAGCATCGGGCG TERM 1373 1037293 - 1037322 + F 95 -16.5 -2.75577 | opp_overlap 1037292 1037296, overlap 1037290 1037296 TGTTAATCCATACAG CAACAGTGCCGGG GCAA CCCGGTGCTGTTG TCCGTTTTAGCATCG TERM 1374 1037296 - 1037319 + F 88 -12.4 -3.52113 | opp_overlap 1037296 1037292, overlap 1037293 1037290 TAATCCATACAGCAA CAGTGCCGGG GCAA CCCGGTGCTG TTGTCCGTTTTAGCA TERM 1375 1038853 - 1038838 - g 77 -8.2 -4.19624 | GAGGTGGAAGAGAAA CGCGCC CGTG AGCGCG AACAACTGGCGGCAT TERM 1376 1039008 - 1039035 + G 90 -12.6 -3.84825 | opp_overlap 1038995, overlap 1039009 GAGTGGCGCCCTGGC AGCAGGCGCCGC GGCC GCTGCGCCTGCA TTTAGTCTGGCTACC TERM 1377 1039009 - 1039034 + G 87 -16.1 -2.90573 | opp_overlap 1038995, overlap 1039008 AGTGGCGCCCTGGCA GCAGGCGCCGC GGCC GCTGCGCCTGC ATTTAGTCTGGCTAC TERM 1378 1039204 - 1039189 - g 91 -6.8 -5.19328 | gap 1, overlap 1039190 1039191 ATTGCAGAAGAAAAA GC-CCGC GAG GCGGAGC GCAATCAGTACGAGA ftsK 1037371 - 1041426 + | DNA translocase FtsK TERM 1379 1041721 - 1041701 - g 73 -5.3 -4.66163 | overlap 1041703 ACCTTTACTCAAAAA GTCACCGAT GGC AGCGGTGCC GCGGTGCAGGAGGGA lolA 1041566 - 1042180 + | outer-membrane lipoprotein carrier protein TERM 1380 1042915 - 1042929 + G 74 -7 -4.25104 | overlap 1042918 GACCGAGATCGCCGG CGAGCG CAG CGCGCG TTTTGATAACAAAGG ycaJ 1042190 - 1043533 + | recombination factor protein RarA TERM 1381 1043702 - 1043718 + F 71 -9.5 -3.18582 | AAAACGTCGCTATTA CGTAAAC GCG GTTTACG TTCATCAATACAATC TERM 1382 1044574 - 1044585 + G 71 -7.2 -4.03167 | opp_overlap 1044573 GCCGATTAAAATGAC GGCG CATA CGCC TTGTTTCCGTTCTGA TERM 1383 1044946 - 1044934 - g 77 -4.8 -4.8543 | CAAGTCCGACAAAAA GACC CGTCT GGTC CATACCCTGAATGGT serS 1043792 - 1045084 + | seryl-tRNA synthetase TERM 1384 1045123 - 1045110 - f 93 -9.5 -4.56597 | opp_overlap 1045110 CTCCTCTTCTAAAAA GCGCC TTCG GGCGC TTTTTTTATGCCAGT TERM 1385 1045110 - 1045123 + F 100 -9.5 -5.61596 | opp_overlap 1045110 CTCCTCTTCTAAAAA GCGCC TTCG GGCGC TTTTTTTATGCCAGT TERM 1386 1046067 - 1046054 - g 71 -9.5 -3.54638 | ATAACCCTGGCGAAA CCCGC ATGA GCGGG GGCGGTGTAACGTAT dmsA 1045321 - 1047765 + | anaerobic dimethyl sulfoxide reductase subunit A dmsB 1047776 - 1048393 + | anaerobic dimethyl sulfoxide reductase subunit B TERM 1387 1048661 - 1048673 + G 76 -3.3 -5.0538 | opp_overlap 1048658 GAGCAATGAAATTGC CAGCG GCT CGGTG TTTTTTGCGGTCGGC dmsC 1048395 - 1049258 + | anaerobic dimethyl sulfoxide reductase subunit C TERM 1388 1049313 - 1049259 - f 70 -9.9 -3.07816 | opp_overlap 1049267 1049268 GCGGTAGCCAGTTAA CGCGTTGACGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATTCGCCTTTAGCCG CCATCAATCTAAGGA TERM 1389 1049267 - 1049305 + F 100 -17.5 -3.53811 | opp_overlap 1049259, overlap 1049268 CAGTTAACGCGTTGA CGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATTCGCC TTTAGCCGCCATCAA TERM 1390 1049268 - 1049304 + F 100 -21 -2.72144 | opp_overlap 1049259, overlap 1049267 AGTTAACGCGTTGAC GCGCATTCGGCCTGCA GAACG TGCAGGCCGAATTCGC CTTTAGCCGCCATCA ycaD 1049608 - 1050756 + | MFS family transporter TERM 1391 1050769 - 1050798 + F 78 -5.7 -4.77047 | overlap 1050771 TGACTGTTCTCTGAA TCGTATGCAGGAC GTGA GTCTTGCATACTC TTTGTTTATGTTTTA TERM 1392 1050771 - 1050796 + F 95 -12.7 -3.95749 | overlap 1050769 ACTGTTCTCTGAATC GTATGCAGGAC GTGA GTCTTGCATAC TCTTTGTTTATGTTT TERM 1393 1051455 - 1051475 + G 72 -4 -4.71223 | overlap 1051446 GGTCTGTGGCCGGAA TTGCCATG TTTAT CATGTCAA TTTTATATGTTGTGA TERM 1394 1051885 - 1051897 + G 70 -3.3 -4.70583 | TACTCTGGGGCAAAT CGCCG CGC TGGTG TTTTCTATTGATGCG ycaM 1050974 - 1052395 + | putative amino-acid transporter TERM 1395 1052412 - 1052434 + T 73 -7.7 -4.19238 | gap 1 GACGCTCTTTTCCAC GGCGCTC-CT GTCA GGCGAGCGCC TTTTAAGGTTACAGG TERM 1396 1052660 - 1052639 - T 100 -11.6 -4.39568 | opp_overlap 1052639 ATCCAGACAGCAAAA CGGCTACC GTCATG GGTAGCCG TTTAAAAGCGGGTAA TERM 1397 1052639 - 1052660 + T 86 -11.6 -3.53444 | opp_overlap 1052639 ATCCAGACAGCAAAA CGGCTACC GTCATG GGTAGCCG TTTAAAAGCGGGTAA pflA 1053485 - 1052688 - | pyruvate formate lyase-activating enzyme 1 STM0971 1053930 - 1053604 - | putative cytoplasmic protein STM0972 1054061 - 1055020 + | SopD-like protein TERM 1398 1055064 - 1055024 - T 74 -3.4 -4.9725 | gap 1, opp_overlap 1055035 1055062, overlap 1055035 ATGCTTATATAAAAA GTCATTAAAAAGGCCCCAC TGAT ATGGAGCCTTTTTTGT-AC GCTTTTTATGGCGTA TERM 1399 1055035 - 1055054 + T 84 -4.9 -5.28826 | opp_overlap 1055024 1055035 AAAAGTCATTAAAAA GGCCCCA CTGATA TGGAGCC TTTTTTGTACGCTTT TERM 1400 1055054 - 1055035 - T 84 -7.8 -4.79667 | opp_overlap 1055035, overlap 1055024 AAAAGTCATTAAAAA GGCCCCAC TGAT ATGGAGCC TTTTTTGTACGCTTT pflB 1057378 - 1055096 - | pyruvate formate lyase I TERM 1401 1055515 - 1055529 + g 71 -4.2 -4.65916 | CAGCGCGACGACCAT CCGG GGTGTTA CCGG TTTTCTTACCATACA focA 1058295 - 1057438 - | formate transporter TERM 1402 1058628 - 1058648 + r 71 -10.4 -2.62184 | gap 1, opp_overlap 1058628 CGAAAATAAATAAAA CGGGGCCGC AAAG GCG-CCCCG TAATATAACGCAGCC TERM 1403 1058648 - 1058628 - R 100 -10.4 -5.26247 | gap 1, opp_overlap 1058628 CGAAAATAAATAAAA CGGGGCCGC AAAG GCG-CCCCG TAATATAACGCAGCC ycaO 1060460 - 1058700 - | putative cytoplasmic protein TERM 1404 1058846 - 1058815 - G 83 -5.7 -4.85599 | gap 1 GGTAGTCCATAAAAA GCCG-CTTCACCGC TAAGC GCGGCGCTGGCGGC CTCTACAGCCTCTGC TERM 1405 1060249 - 1060262 + g 81 -3.7 -5.14563 | overlap 1060242 1060256 TATTCGCCCAGCGCC GAGGC CAGC GCCGC TTTTTTGGTCGCGCC TERM 1406 1060971 - 1060992 + G 78 -2.3 -5.25803 | GGAAAAACTGCAGCG CTCGAAC ATGACGGA GTTTGAG TTTTTTATGGAGCTT ycaP 1060597 - 1061289 + | putative inner membrane protein serC 1061475 - 1062563 + | phosphoserine aminotransferase TERM 1407 1062581 - 1062601 + F 100 -10.4 -5.48623 | CGTTTCTTTTTTCAT CCCCACGG CCAGT CTGTGGGG TTTTTATTTCTGTTT TERM 1408 1063081 - 1063100 + G 70 -7 -4.07568 | opp_overlap 1063077 CAGGAAAACTATCCG CCCCTGCG TCTG CGCGGCGG TTTTACCGGCGGCGA aroA 1062634 - 1063917 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1409 1064012 - 1064027 + F 81 -3.3 -5.33785 | opp_overlap 1064012 TTGTTGATGATTTAA CACAT TGATTT ATGTG TTTTTTATAATAGTT ycaL 1064060 - 1064821 + | putative Zn-dependent protease cmk 1064994 - 1065677 + | cytidylate kinase TERM 1410 1065965 - 1065955 - g 87 -8.2 -4.63527 | overlap 1065957 TGAGCAGTTCAAAAA CGCC CAG GGCG AACTGGAAATCCAGG rpsA 1065791 - 1067464 + | 30S ribosomal protein S1 TERM 1411 1067573 - 1067543 - f 85 -12.7 -3.33696 | gap 1, opp_overlap 1067550, overlap 1067546 1067550 TCGGCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATCTCACGGCTGCA TERM 1412 1067571 - 1067546 - f 93 -15.5 -2.84098 | opp_overlap 1067550, overlap 1067543 1067550 GCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATCTCACGGCTG TERM 1413 1067550 - 1067567 + F 86 -14.1 -3.20382 | opp_overlap 1067546 1067543 1067550 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATCTCACG TERM 1414 1067567 - 1067550 - f 90 -14.1 -3.30554 | opp_overlap 1067550, overlap 1067546 1067543 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATCTCACG ihfB 1067620 - 1067904 + | integration host factor subunit beta TERM 1415 1067927 - 1067957 + F 87 -11.3 -3.86897 | opp_overlap 1067935, overlap 1067928 1067935 CGCAAAACTTGAACC CGAAAAAAGCACC GTCAG GGTGCTTTTTTCA TTTATACGCCGTCAG TERM 1416 1067928 - 1067956 + F 87 -14.8 -2.91924 | opp_overlap 1067935, overlap 1067927 1067935 GCAAAACTTGAACCC GAAAAAAGCACC GTCAG GGTGCTTTTTTC ATTTATACGCCGTCA TERM 1417 1067935 - 1067949 + F 90 -7.1 -5.42514 | opp_overlap 1067935, overlap 1067928 1067927 TTGAACCCGAAAAAA GCACC GTCAG GGTGC TTTTTTCATTTATAC TERM 1418 1067949 - 1067935 - f 87 -7.1 -5.09426 | opp_overlap 1067935 1067928 1067927 TTGAACCCGAAAAAA GCACC GTCAG GGTGC TTTTTTCATTTATAC TERM 1419 1069420 - 1069438 + G 71 -5.9 -4.28656 | overlap 1069422 ATGGTACCTGACCGA TCGCGCG TTAGC CGCGCTA TTTTACCTGTTGAAT TERM 1420 1069776 - 1069793 + G 74 -7.7 -4.21194 | opp_overlap 1069775, overlap 1069779 TGCGCTGGCATAATC TGACGCC GGAG GGCGTTA TTTTGAGTCATGAGC TERM 1421 1069779 - 1069790 + G 77 -7.2 -4.22883 | opp_overlap 1069775, overlap 1069776 GCTGGCATAATCTGA CGCC GGAG GGCG TTATTTTGAGTCATG ycaI 1068134 - 1070398 + | hypothetical protein msbA 1070435 - 1072183 + | lipid transporter ATP-binding/permease protein TERM 1422 1072402 - 1072392 - g 70 -6.8 -4.07568 | TTGGCTGGTGGAAAA GCTG CAA CAGC GTGGCGTGCGCGTGG TERM 1423 1072671 - 1072682 + G 74 -7.2 -4.07885 | AATTGTGGTGATTGA CGGC GTGC GCCG TTTTGGCAACGGCTG TERM 1424 1072782 - 1072745 - g 80 -9.1 -4.08216 | gap 1 CCAGTCGCCTGAAAA CCGTA-GACGCCGCTATC GTG AATGGCGGCGTCGCCCGG GCGGGCGAAATCCCC lpxK 1072180 - 1073157 + | tetraacyldisaccharide 4'-kinase TERM 1425 1073291 - 1073272 - g 75 -6.3 -4.65895 | opp_overlap 1073286 GGGGCTATTGAAAAA GCCGCGC CGTAAC GCGCTGC CTGGCGATGTTCTTG ycaQ 1073201 - 1074433 + | putative cytoplasmic protein ycaR 1074485 - 1074667 + | hypothetical protein TERM 1426 1075024 - 1075008 - g 74 -7.9 -4.08216 | overlap 1075009 CCAGGTCGCGGAAAA TCTGGCG CAG CGCCAGG TTGGCATGGCGACGC TERM 1427 1075023 - 1075009 - g 72 -11.4 -3.04715 | overlap 1075008 CAGGTCGCGGAAAAT CTGGCG CAG CGCCAG GTTGGCATGGCGACG kdsB 1074664 - 1075410 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 1428 1075452 - 1075416 - f 73 -10.9 -2.74371 | opp_overlap 1075413, overlap 1075413 1075450 AATGCGTTAACATGA TCCTGTTCATGATCGTC TTA GACGGTCATGAACAGCG CGGTATGATAGCGCA TERM 1429 1075507 - 1075520 + F 70 -5.3 -4.45077 | TCAGTGGCGGCTTTC TCGTA CCGT TACGA TTTTCCTCATTTTTC TERM 1430 1075706 - 1075696 - g 74 -8.2 -4.05446 | opp_overlap 1075696 1075695 1075703 TGCGTGAATGAGAAA GCGG ATT CCGC ATTGTGGTCATTATA STM0989 1075621 - 1076514 + | hypothetical protein ycbC 1077270 - 1076494 - | hypothetical protein TERM 1431 1076932 - 1076898 - G 71 -4.9 -4.56597 | gap 1 CGCCGCCGGTAAAAA TCAGCC-TGGCTCCCG GATT CGCGCGCCACAGCCGA ATGCCTTCCGCCAGC smtA 1077406 - 1078209 + | putative metallothionein SmtA TERM 1432 1079080 - 1079051 - g 73 -8.7 -3.87815 | CGTCACGTGCATAAA TTTATCCGTACCG CGAT CGATATGGATAAA AACCGTGTCTTCGCC TERM 1433 1079370 - 1079397 + G 77 -11.3 -3.49568 | gap 1, opp_overlap 1079368, overlap 1079340 1079368 ATCTGGCGCAATACC CGCGCGCGCGTC ATTTC GACGTG-GCGCG TATTGTTATCGATCA mukF 1078202 - 1079524 + | condesin subunit F mukE 1079505 - 1080209 + | condesin subunit E TERM 1434 1080854 - 1080864 + G 70 -6.8 -4.20367 | AGCGCCATTACCCGG TCGC TAC GCGA TTATTTATTGCCGGA TERM 1435 1081625 - 1081602 - g 93 -4.4 -5.4505 | opp_overlap 1081601, overlap 1081605 CGTTGGAACAAAAAA TGAGCGTGGC GCAA ACCGCGCACA GTCAGTTTGAGCAGG TERM 1436 1083075 - 1083054 - g 70 -8.7 -3.72893 | gap 1, opp_overlap 1083053, overlap 1083058 CATGGTCGCAGCAAA TGC-AGCGCG ACG CGCGCCAGCA GGCTTTTGCTCTGGC TERM 1437 1083194 - 1083172 - g 79 -7.6 -4.42238 | overlap 1083173 CGATCTCAACGAAAA GCTGCGCCAG CGG CTGGAGCAGG CGGAAGCCGAGCGTA TERM 1438 1083193 - 1083173 - g 74 -11.1 -3.2486 | overlap 1083172 GATCTCAACGAAAAG CTGCGCCAG CGG CTGGAGCAG GCGGAAGCCGAGCGT TERM 1439 1083227 - 1083247 + G 81 -12.5 -3.07816 | CGCGCCCGCGAAGCG CTGCGCAGC CAT GCCGCGCAG TTAAGTCAGTACAGC mukB 1080209 - 1084675 + | cell division protein MukB TERM 1440 1084787 - 1084802 + F 100 -11.8 -5.42975 | TTATCATTAGCCTGG GGCGGC GAAA GCCGCC TTTTTCTTTATCTGA ycbB 1085020 - 1086861 + | hypothetical protein ycbK 1087121 - 1087669 + | putative outer membrane protein ycbL 1087697 - 1088344 + | putative metallo-beta-lactamase TERM 1441 1088381 - 1088351 - T 93 -14.2 -3.50853 | opp_overlap 1088358, overlap 1088358 GTCTGGTAAGCAGAA TGAAAAAGCCTGCA CAT TGCAGGCTTTTTTA TCGGTCACGCCAGTC TERM 1442 1088358 - 1088374 + T 100 -12.3 -5.28176 | opp_overlap 1088358 1088351 AAGCAGAATGAAAAA GCCTGCA CAT TGCAGGC TTTTTTATCGGTCAC TERM 1443 1088374 - 1088358 - T 100 -12.3 -4.95876 | opp_overlap 1088358, overlap 1088351 AAGCAGAATGAAAAA GCCTGCA CAT TGCAGGC TTTTTTATCGGTCAC aspC 1089596 - 1088406 - | aromatic amino acid aminotransferase TERM 1444 1089113 - 1089074 - G 70 -9.2 -3.66556 | gap 1, opp_overlap 1089081 AACCGTGGAACAGAA CCACATCGCCGGCCTGTGC TTC GCTCAGGCTGGCT-TGTAG CGCTTCAAAATCCAG TERM 1445 1089081 - 1089107 + g 100 -15.8 -3.33261 | opp_overlap 1089074 GAACAGAACCACATC GCCGGCCTGTGC TTC GCTCAGGCTGGC TTGTAGCGCTTCAAA TERM 1446 1089181 - 1089193 + g 71 -4.8 -4.5442 | ACTTCCAGGCCGGCA GCGT TAAAC ACGC TTTTGTGGTTCGGCC TERM 1447 1089281 - 1089298 + g 71 -9.8 -3.55761 | overlap 1089282 1089284 CGGCAATGCGTAACG CGCCGG TACCGC CCGGCG TTTGCGCCGTGCGTG TERM 1448 1089748 - 1089733 - R 100 -9 -5.77988 | opp_overlap 1089733 AGAGAGATAAAAAAA CAGGAC CGAA GTCCTG TTTTTGAGGCATAAA TERM 1449 1089733 - 1089748 + r 89 -9 -4.58395 | opp_overlap 1089733 AGAGAGATAAAAAAA CAGGAC CGAA GTCCTG TTTTTGAGGCATAAA ompF 1090872 - 1089781 - | outer membrane protein F precursor TERM 1450 1091317 - 1091327 + r 72 -2.6 -5.04597 | opp_overlap 1091302 1091301 1091317, overlap 1091302 TAATCCGCAATAAAA TTAA GGA TTAA TTTTTATGTGTAAAT TERM 1451 1091432 - 1091422 - R 78 -5.4 -4.79352 | TTATTGATAATAAAA CTGA CAT TCAG GCGAAAAAAAAGGCC TERM 1452 1091460 - 1091444 - R 100 -13.7 -5.78622 | opp_overlap 1091444 TCAGGCGAAAAAAAA GGCCAGC ATA GCTGGCC TTGAGTGTGACGTAA TERM 1453 1091444 - 1091460 + r 86 -13.7 -3.12999 | opp_overlap 1091444 TCAGGCGAAAAAAAA GGCCAGC ATA GCTGGCC TTGAGTGTGACGTAA asnC 1092879 - 1091479 - | asparaginyl-tRNA synthetase TERM 1454 1091989 - 1091975 - G 78 -7.1 -4.60797 | TCGGTAGAGACAAAA CGCTC CAGAC GAGCG ATAGCGTCTTTATCC TERM 1455 1092474 - 1092430 - G 70 -9.3 -3.67597 | CTGCTCATCGAAGAA GCGAT-GCAGCGCCTGCGCCA GAGTA TGGCGGACGCGC-GCTACCGC GCCAATCAGGTTGGT TERM 1456 1093040 - 1093021 - R 74 -5.7 -4.6526 | AGAAACCTGTAAAAA GTTCGCA CCTGCT CGCGAAC CATTGAGAATTTAGG STM1001 1093541 - 1093080 - | putative leucine response regulator TERM 1457 1093182 - 1093169 - G 79 -3.1 -5.13722 | CTGAGGAAAAGAAAA GCTCA CGGG TAAGC GCTTCATATTCCGCC TERM 1458 1094793 - 1094804 + G 77 -4.4 -4.88918 | GCCTATTATTCGGGA CAAC ACCA GTTG TTTTATTTCCGCTGA STM1002 1093858 - 1095072 + | diaminopropionate ammonia-lyase TERM 1459 1095133 - 1095117 - f 72 -5.1 -4.68593 | opp_overlap 1095106, overlap 1095106 GGTAGCATGTAAAAA TGCGTTT TTT ATACGCA TAATAAACCTAATGC TERM 1460 1095353 - 1095364 + G 75 -5.8 -4.61353 | CTCTTTGAATTTCTA TGGG GTGG CCCA TTATTTTTGTGTGTC TERM 1461 1095508 - 1095490 - g 81 -2.4 -5.3472 | AAAAAATAAACAAAA CACTAC TGGCGAG GTAGCG TCTAAAAAATCCTTA STM1003 1095317 - 1096753 + | putative transcriptional regulator TERM 1462 1096819 - 1096793 - T 85 -12.3 -3.41745 | overlap 1096797 TGGTCAGAAGAGTAA CAAAGCGCCCA CTTTC CGGGCGCTTCG CACAGGCATGGTTAA TERM 1463 1096815 - 1096797 - T 87 -9.5 -4.34759 | overlap 1096793 CAGAAGAGTAACAAA GCGCCCA CTTTC CGGGCGC TTCGCACAGGCATGG pncB 1098033 - 1096831 - | nicotinate phosphoribosyltransferase STM1005 1099520 - 1098228 - | integrase TERM 1464 1099282 - 1099325 + g 73 -5.3 -4.60889 | overlap 1099290 1099319 1099320 AGCACAGTAATTTCC TTTCTATCCTGACCGAACC GGGCAA GGTTCGGTGAGTTTGGGAA TTTTTCCACATAGTT TERM 1465 1099290 - 1099317 + g 74 -9.9 -3.68853 | overlap 1099282 AATTTCCTTTCTATC CTGACCGAACC GGGCAA GGTTCGGTGAG TTTGGGAATTTTTCC TERM 1466 1099384 - 1099401 + g 82 -5.5 -5.07567 | opp_overlap 1099375 1099370 ACCGAAGAACGCAGT TCGCCAG CTAT CTTGCGA TTTTTTGCAGTGTCA TERM 1467 1099410 - 1099442 + g 73 -9.1 -3.89215 | overlap 1099411 CTTGCGATTTTTTGC AGTGTCAGGGATACC AAG GTTTTCCCTGACACG TTTACCTTTATACAG TERM 1468 1099411 - 1099441 + g 79 -12.6 -2.93047 | overlap 1099410 TTGCGATTTTTTGCA GTGTCAGGGATACC AAG GTTTTCCCTGACAC GTTTACCTTTATACA STM1006 1099813 - 1099565 - | excisionase STM1007 1100093 - 1099854 - | hypothetical protein TERM 1469 1100114 - 1100098 - R 70 -5.1 -4.40572 | ATAAGGCGCATAAAA CCTCC TCAGGCG GGAGG GCGTAACCCCTCCCG STM1008.S 1101245 - 1100136 - | hypothetical protein STM1009 1104141 - 1101256 - | exodeoxyribonuclease TERM 1470 1102522 - 1102554 + g 80 -11.9 -3.45032 | overlap 1102544 1102545 TGGTACACCTTCATA GCGGCCCGGCTCGAA GTA TTCCGGCCAGGCTGC TTCTGGCTCTTCTTG TERM 1471 1104245 - 1104262 + r 93 -10.5 -4.72497 | GGACCGGACAGGGCA CGCCCGC TTCG GTGGGCG TTTTCTTAATGGATG STM1010 1104567 - 1104268 - | hypothetical protein STM1010.1n 1104747 - 1104589 - | hypothetical protein TERM 1472 1104631 - 1104643 + g 74 -3.4 -4.93877 | TTCAGCACACTGCCT GGAA CAATA TTCC TTTTCTTTGCTCGCC STM1011 1105000 - 1104740 - | hypothetical protein TERM 1473 1105025 - 1105006 - R 100 -10.8 -4.91109 | opp_overlap 1105004 CTTGGAGCATAAAAA TAGCACCT AAAG AGGTGCTA CCTGTATGGATGAGT STM1012 1105460 - 1105050 - | regulatory protein STM1013 1105785 - 1106159 + | regulatory protein TERM 1474 1106210 - 1106186 - f 72 -8.6 -3.81062 | gap 1, opp_overlap 1106186, overlap 1106181 1106179 ACTAAAAAGGCGAAA GCCGC-GGTGA GGGG TCACCAACGGC TTTCTGGTGCAAAAA TERM 1475 1106744 - 1106769 + G 77 -8.3 -4.11484 | opp_overlap 1106737 1106761, overlap 1106725 1106745 CCCGAAAACGGGGAT AGTTATCCCTG AAAA CAGGGATAGCG TTTTACCCCATTCAG TERM 1476 1106745 - 1106768 + G 76 -11.8 -3.06569 | opp_overlap 1106737 1106761, overlap 1106744 CCGAAAACGGGGATA GTTATCCCTG AAAA CAGGGATAGC GTTTTACCCCATTCA TERM 1477 1106815 - 1106798 - g 88 -11.3 -4.09864 | opp_overlap 1106788 1106785 AGCCATCCCTGAAAA CGGGGAT AGTT ATCCCCG AAAAGAGGGAAGGGC STM1014 1106244 - 1107227 + | regulatory protein STM1015 1107230 - 1107979 + | putative replication protein STM1016 1107990 - 1108337 + | hypothetical protein STM1017 1108334 - 1108645 + | hypothetical protein STM1018 1108723 - 1109013 + | hypothetical protein TERM 1478 1109135 - 1109149 + F 79 -4.2 -5.23292 | TTGAATGAATGTGAA CCCG CCGAGTA CGGG TTTTCTTTTATCTGA TERM 1479 1109166 - 1109179 + F 100 -9.5 -5.09225 | TTTCTTTTATCTGAA CCCGC TGCG GCGGG TTTTTTGCCTAAAAT STM1019 1109305 - 1109538 + | hypothetical protein TERM 1480 1109961 - 1109936 - f 79 -12.6 -2.84794 | overlap 1109933 GTAACCTGACAATTA TGCGCCACGG AGAATA CCATGGCGCA CGAATTACAACTCAT STM1020 1109954 - 1110556 + | hypothetical protein TERM 1481 1110969 - 1110954 - g 78 -6 -4.72201 | overlap 1110955 GCTGAGAAAAAAGAA CGCGCC GCCT GGCGCC AGCGGAAAGCCGCGG TERM 1482 1110968 - 1110955 - g 70 -9.5 -3.42236 | overlap 1110954 CTGAGAAAAAAGAAC GCGCC GCCT GGCGC CAGCGGAAAGCCGCG STM1021 1110765 - 1111376 + | hypothetical protein TERM 1483 1111372 - 1111361 - f 70 -2.2 -5.00616 | gap 1 GCGTGCGCTAAAAAA GCTGG AGG CC-GC ATGAAACCAGAACTG STM1021.1n 1111373 - 1111519 + | hypothetical protein STM1022 1111509 - 1112306 + | putative molecular chaperone TERM 1484 1112395 - 1112422 + G 100 -9.2 -5.88471 | opp_overlap 1112401, overlap 1112401 TGACGTTACAAGAAT TAAGAACCTCGC CTCG GCGGGGTTTTTG TTTTTTTTGGTGGTA TERM 1485 1112401 - 1112416 + G 100 -8.2 -5.94743 | opp_overlap 1112401, overlap 1112395 TACAAGAATTAAGAA CCTCGC CTCG GCGGGG TTTTTGTTTTTTTTG STM1023 1112373 - 1112690 + | hypothetical protein TERM 1486 1112731 - 1112746 + F 100 -8.2 -5.61881 | TTACCAATTTCATTA GGTCGC TTCG GCGGCC TTTTTCTTTTTCAGG STM1024 1112864 - 1112989 + | hypothetical protein STM1025 1113574 - 1113125 - | hypothetical protein TERM 1487 1113710 - 1113742 + r 100 -22.3 -4.05877 | opp_overlap 1113710 1113714, overlap 1113714 TGTGTTCTTTATGAA TAAATATCCTCCGGC TAT GCCGGAGGATATTTA TTATTTCCTCTCATA TERM 1488 1113742 - 1113710 - R 100 -22.3 -3.14132 | opp_overlap 1113710 1113714, overlap 1113714 TGTGTTCTTTATGAA TAAATATCCTCCGGC TAT GCCGGAGGATATTTA TTATTTCCTCTCATA TERM 1489 1113714 - 1113738 + r 100 -18.7 -4.61162 | opp_overlap 1113710 1113714, overlap 1113710 TTCTTTATGAATAAA TATCCTCCGGC TAT GCCGGAGGATA TTTATTATTTCCTCT TERM 1490 1113738 - 1113714 - R 100 -18.7 -4.24342 | opp_overlap 1113714 1113710, overlap 1113710 TTCTTTATGAATAAA TATCCTCCGGC TAT GCCGGAGGATA TTTATTATTTCCTCT STM1026 1114447 - 1113935 - | hypothetical protein STM1027 1114978 - 1115226 + | hypothetical protein STM1028 1115210 - 1115662 + | lysozyme STM1029 1115680 - 1116159 + | hypothetical protein STM1030 1116367 - 1116900 + | hypothetical protein TERM 1491 1118958 - 1118970 + GF 71 -10.5 -2.70932 | opp_overlap 1118937 AGAAAAAAATTTTAC CCGCC TGG GGCGG TGGTTCCGGAGGAGG STM1031 1116857 - 1118995 + | hypothetical protein TERM 1492 1119912 - 1119889 - gf 86 -14.6 -2.65354 | gap 1, opp_overlap 1119890, overlap 1119886 1119885 TGCATCTTAAATTCA CCCGTCGCCTG AAT CAGGCG-CGGG GCGTCACGCTGCTGG TERM 1493 1119984 - 1120003 + GF 74 -7.1 -4.2243 | gap 1, overlap 1119998 GACAGTGAAAGGCTG GCCGCGCG TATTT CG-GCGGC TTTTGCCATGTTTAT TERM 1494 1120713 - 1120694 - g 72 -3.5 -4.82901 | overlap 1120679 1120676 TGGCGGCGATAAAAA TGCCGCC GGTGAT GACAGCA GGGAACGGACGCGGG STM1032 1119429 - 1120742 + | hypothetical protein STM1033 1120666 - 1122747 + | Clp protease-like protein TERM 1495 1122777 - 1122788 + F 93 -7.2 -5.64274 | ACATTAAGCGATACG GCCC TGAC GGGC TTTTTTTATACCTGA TERM 1496 1122824 - 1122806 - f 95 -14.6 -3.63627 | TTTTTATACCTGAAA TCCGGCAC GGC GTGCCGGA AAGGAGAATAACCGT STM1034 1122838 - 1123161 + | putative RecA/RadA recombinase STM1035 1123154 - 1123453 + | ATP-binding sugar transporter-like protein STM1036 1123434 - 1124000 + | minor tail protein STM1037 1123997 - 1124398 + | minor tail protein STM1038 1124410 - 1125159 + | major tail protein STM1039 1125205 - 1125603 + | minor tail protein STM1040 1125600 - 1125929 + | minor tail protein TERM 1497 1127874 - 1127846 - g 74 -2.4 -5.1101 | gap 1, opp_overlap 1127846 CCACGACCGAAAAAA TGACGGAAGC-GC ATAA GCAGCTTTTGTCA TTTCAGCAGCGCATC STM1041 1126009 - 1128996 + | minor tail protein STM1042 1128993 - 1129325 + | minor tail protein STM1043 1129424 - 1129921 + | attachment/invasion protein TERM 1498 1129917 - 1129937 + T 81 -13.3 -2.7386 | opp_overlap 1129911 1129910, overlap 1129930 ACGTCAAAGCTGGAA CCTAGGTGC TTG GCGCCTAGG TGCTTGGCGTAGGTT TERM 1499 1129989 - 1130006 + T 100 -8.4 -5.28176 | opp_overlap 1129988 CGATACAGATTTAAT GCCCTC CAGTGA GAGGGC TTTTTTATGGGTAAA sodC 1130586 - 1130053 - | superoxide dismutase precursor TERM 1500 1130731 - 1130718 - g 71 -8.1 -3.82218 | opp_overlap 1130710 1130727 AGCGAGACCACCAAA GCGGA GCAG TCCGC GAAGGTGGATTTGTG TERM 1501 1131300 - 1131288 - g 77 -7.7 -4.2687 | CCGAAAAAGGATAAA TGCAG CCA CTGCA TGAAAGGCTGTGAAA TERM 1502 1131326 - 1131341 + G 70 -3.2 -4.75174 | overlap 1131317 TGAAATGCGTAACAA TCTGGT GAAT GCCGGA TTTTTCGCTTCCATC STM1045 1130676 - 1131371 + | minor tail protein STM1046 1131381 - 1132118 + | tail assembly protein TERM 1503 1132471 - 1132461 - gf 71 -6.8 -4.18494 | overlap 1132463 CACCTGTACCCAAAA CACC GAC GGTG GGTCAGGCAGATAAC STM1047 1132016 - 1132720 + | tail assembly protein TERM 1504 1132752 - 1132766 + F 91 -8.5 -5.05116 | opp_overlap 1132749 1132747 1132752 AGCTGATACACATGA CCGCC ATTAC GGCGG TTTTGTTATTTATGG STM1048 1132792 - 1135239 + | host specificity protein J TERM 1505 1135884 - 1135870 - g 81 -8.6 -4.26589 | ATCAGATAGGGAAAA CCATCA CGG TGATGG CTAACTGTGAGCGTA STM1048.1N 1135266 - 1136141 + | hypothetical protein TERM 1506 1136208 - 1136228 + F 100 -9 -5.09259 | gap 1, overlap 1136202 1136209 GCGTAATTTCTCTGG CGG-CAGGG CTTT CCCTGTCCG TTTTATTTTCCACTG TERM 1507 1136441 - 1136458 + F 100 -10.5 -5.24129 | GTGAATGAATCTGAA GCCTGCC TGCG GGCGGGC TTTTTTATGGAGGCA TERM 1508 1136867 - 1136812 - g 89 -13.8 -3.62597 | GCGATGGTGGAAGAA GTTGCCCGCCAGGCATCGGAGGCATC GCGG AATGCCACCGCCGCAGGGCAGGCATC TGAACAGGCGCAGAC TERM 1509 1137038 - 1137013 - g 73 -5.9 -4.4648 | ACGGCGACCACAAAA GCCGGGGAGGC ATCA GCCAGCGCGGC GTCGGCTGACACAGC TERM 1510 1137085 - 1137059 - g 95 -15 -3.41125 | overlap 1137052 CTGACACAGCCAGAA CGGCGGCAGCCG CAT CGGCAGCCGCAG CGAAAACATCTGAAG TERM 1511 1137315 - 1137291 - g 95 -12.7 -4.08767 | overlap 1137292 GGCAGCGTCGGAAAA GGCGGCAGCCG CAT CGGCAGCCGCA GCGAAAACATCTGAG TERM 1512 1137314 - 1137292 - g 100 -16.2 -3.05046 | overlap 1137291 GCAGCGTCGGAAAAG GCGGCAGCCG CAT CGGCAGCCGC AGCGAAAACATCTGA STM1049 1136476 - 1138914 + | tail fiber protein TERM 1513 1139301 - 1139268 - g 77 -8.3 -4.08064 | gap 2, overlap 1139275 1139286 AAGGTCTGGGTAAAA GACGAAGC-G-GCTG AAAAAG CAGCGCAGCTTCGTC AGGCGGAAGAAACCA STM1050 1138914 - 1139495 + | tail fiber assembly like-protein sseI 1139971 - 1140939 + | secreted effector protein TERM 1514 1141097 - 1141077 - T 84 -7.5 -4.82128 | overlap 1141078 TCAGGAAAGAGAAAA GCCAGTCGC TGT ACGACTGGA TACAGGCGCAGTTGA TERM 1515 1141096 - 1141078 - T 82 -11 -3.48193 | overlap 1141077 CAGGAAAGAGAAAAG CCAGTCGC TGT ACGACTGG ATACAGGCGCAGTTG STM1053 1142213 - 1141587 - | hypothetical protein STM1054 1142581 - 1142282 - | hypothetical protein TERM 1516 1142468 - 1142453 - G 100 -6.8 -5.96219 | opp_overlap 1142452 1142453 GAGCCATAAAAAAAA CAGCCC TGAC AGGCTG GTTTTTAAGGGGAAT STM1055 1143252 - 1142566 - | hypothetical protein STM1056 1143714 - 1143523 - | MsgA-like protein TERM 1517 1145664 - 1145644 - g 73 -5.3 -4.56775 | ATTCCGTTGCAAAAA GGCGGTCAC CCG GTCAACGCC GTGCTGAACGTCACG pepN 1144141 - 1146753 + | aminopeptidase N TERM 1518 1146809 - 1146781 - f 77 -11 -3.14671 | gap 1, opp_overlap 1146781, overlap 1146779 1146777 1146772 TAAAGAGGTAAGACA TGCCCGGTAAGCG TTAG CGCTG-CCGGGCA TTTTTTTGCCGGACG TERM 1519 1146781 - 1146809 + F 100 -13.2 -5.40072 | gap 1, opp_overlap 1146781 1146779 1146777 1146772 TAAAGAGGTAAGACA TGCCCGGTAAGCG TTAG CGCT-GCCGGGCA TTTTTTTGCCGGACG pyrD 1146961 - 1147971 + | dihydroorotate dehydrogenase 2 TERM 1520 1147990 - 1148019 + F 78 -5.7 -4.84918 | opp_overlap 1147990 TTACCCTTTATCAGA CAACCAGGGCT TTATTTCC GGCGCTGGTTG TTTTATATTTCTCCA TERM 1521 1148257 - 1148279 + G 86 -6.8 -4.99035 | CGTAAAATGCTTACG CCGGACGCGT TTT GCCCGACCGG TTTTTGTGTGGATGA ycbW 1148137 - 1148679 + | putative cytoplasmic protein STM1060 1149785 - 1148676 - | putative iron-sulfur protein ycbY 1149884 - 1151992 + | 23S rRNA m(2)G2445 methyltransferase TERM 1522 1153114 - 1153094 - g 74 -9.7 -3.6608 | overlap 1153080 ACCACGCTACTGAAA CTGATGCTG GGA CAGCTTCAG GCTGACAGCGGGCGC TERM 1523 1153774 - 1153789 + G 80 -4.6 -5.00616 | overlap 1153762 AGCGCTACAGGCGCA GGTTGC GGAT GCGGCC TTTTTTAGCCAACCC uup 1152005 - 1153912 + | ABC transporter ATPase component pqiA 1153927 - 1155180 + | paraquat-inducible protein A TERM 1524 1156323 - 1156305 - g 80 -8.8 -4.07568 | GCGCTTCGCTTAAAA CCGGTAAC CTG GTGACCGG GGCGCTGTATGTCGA TERM 1525 1156532 - 1156510 - g 71 -10.6 -3.25169 | opp_overlap 1156512, overlap 1156502 1156524 1156525 TGAACAAGCGACCAA TACGCTGTCT GAA AGCCAGCGTA CTATGCGTCGGCTGC pqiB 1155185 - 1156825 + | paraquat-inducible protein B TERM 1526 1156903 - 1156892 - g 72 -2.2 -4.84311 | GCGGAGAGAATAAAA GCTA TTAT CAGC TCCCGATAGCGCAAA ymbA 1156822 - 1157385 + | putative outer membrane protein TERM 1527 1157408 - 1157434 + F 100 -12.3 -6.20267 | opp_overlap 1157408 GTAATGTAAATTTAA CCGCTTCAGGT CGTGC GCCTGAGGCGG TTTTTTTATTTTTGA TERM 1528 1157434 - 1157408 - f 70 -9.4 -3.30781 | opp_overlap 1157408 GTAATGTAAATTTAA CCGCTTCAGG TCGTGCG CCTGAGGCGG TTTTTTTATTTTTGA TERM 1529 1157576 - 1157598 + F 71 -7.1 -4.16397 | overlap 1157569 1157575 AGGTATTCGTGTAGT GTGATTGCA CATTT TGTAATCAC TGTTTTCTTTTCCAC rmf 1157641 - 1157808 + | ribosome modulation factor TERM 1530 1157825 - 1157855 + T 74 -8.2 -3.95219 | opp_overlap 1157828 1157832, overlap 1157832 1157853 TCTGTCTCTTTAGAA AAAGAAACCTCCGC AGT GCGGAGGTTTCGCC TTTATGGGCTTTGCA TERM 1531 1157852 - 1157828 - T 100 -18.7 -4.82901 | opp_overlap 1157825 1157832, overlap 1157832 GTCTCTTTAGAAAAA GAAACCTCCGC AGT GCGGAGGTTTC GCCTTTATGGGCTTT TERM 1532 1157848 - 1157832 - T 100 -13.7 -4.96501 | opp_overlap 1157825 1157832, overlap 1157828 CTTTAGAAAAAGAAA CCTCCGC AGT GCGGAGG TTTCGCCTTTATGGG TERM 1533 1157832 - 1157848 + T 100 -13.7 -3.74347 | opp_overlap 1157832 1157828, overlap 1157825 CTTTAGAAAAAGAAA CCTCCGC AGT GCGGAGG TTTCGCCTTTATGGG fabA 1158426 - 1157908 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase lonH 1160255 - 1158495 - | putative protease TERM 1534 1159335 - 1159362 + g 72 -12.1 -2.73364 | CGCTTCTGCGCCGCA GGTATCGCCTT CGCATA AAGGCGATGCC TCCTTAAACTGGCGG TERM 1535 1160416 - 1160399 - H 72 -2.7 -5.04385 | CAGATGGCTAAAAAA CTGATAT TCTG ATAACAG TTACACGGTAACATT ycbG 1160441 - 1160893 + | hypothetical protein TERM 1536 1160954 - 1160921 - T 83 -14.1 -2.64616 | gap 1, opp_overlap 1160931, overlap 1160923 1160931 TTGTCATCCAGACCA GAGCAAAAAACCCCGC GAC GCGGGGTTTTTTA-TC AGACGGAAACTTAAG TERM 1537 1160953 - 1160923 - T 82 -13.4 -2.8655 | opp_overlap 1160931, overlap 1160921 1160931 GTCATCCAGACCAGA GCAAAAAACCCCGC GAC GCGGGGTTTTTTAT CAGACGGAAACTTAA TERM 1538 1160931 - 1160945 + T 100 -12.8 -5.24129 | opp_overlap 1160923 1160921 1160931 GACCAGAGCAAAAAA CCCCGC GAC GCGGGG TTTTTTATCAGACGG TERM 1539 1160945 - 1160931 - T 100 -12.8 -5.23316 | opp_overlap 1160931, overlap 1160923 1160921 GACCAGAGCAAAAAA CCCCGC GAC GCGGGG TTTTTTATCAGACGG ompA 1162017 - 1160965 - | outer membrane protein A TERM 1540 1162305 - 1162272 - R 78 -5.4 -4.80882 | gap 1, opp_overlap 1162274 1162282, overlap 1162274 1162282 ATCGTACAGCAAAAA TTGCGGAAACCGCTT CTGAC AAGCGTTCT-CGCAA AAAAAACGTTAGCAC sulA 1162883 - 1162374 - | SOS cell division inhibitor TERM 1541 1163677 - 1163640 - g 71 -10.6 -3.25823 | gap 2, overlap 1163641 GTCGGCGTACATGAA GCGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCGA CTGGGCTCATTCGCT TERM 1542 1163676 - 1163641 - g 81 -14.1 -2.55351 | gap 2, overlap 1163640 TCGGCGTACATGAAG CGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCG ACTGGGCTCATTCGC yccR 1163100 - 1163705 + | putative DNA transformation protein yccS 1165845 - 1163692 - | putative transporter TERM 1543 1164273 - 1164262 - G 73 -5.8 -4.41348 | GTCCGGCCAAATAAA GCTG ACCG CAGC CCAGGCGATAGCGCA TERM 1544 1164518 - 1164483 - G 87 -8.3 -4.67256 | GAACAAACCATAAAA TCGGCAGGCCGATAG CAACGC CTACCAACGTGCCGA TAATCCTGAGCGCAA TERM 1545 1164890 - 1164878 - G 83 -10.5 -3.9281 | AGCAGCTCTAAAGAA GCGCC GCT GGCGC GCATACGTTCAAGCG TERM 1546 1165905 - 1165874 - R 72 -6.5 -4.21194 | gap 1, opp_overlap 1165875 1165890, overlap 1165875 CCCGATCATTCAAAA CGGCGGCGCGCG TTAGCTTCT CGCGCGGCGC-G AGCGGTTTCTACAGA yccF 1166310 - 1165864 - | hypothetical protein TERM 1547 1165890 - 1165910 + g 73 -8.9 -3.85698 | opp_overlap 1165874 1165875 GGCGGCGCGCGTTAG CTTCTCGCG CGG CGCGAGCGG TTTCTACAGAGACGA TERM 1548 1167411 - 1167391 - g 78 -2.3 -5.28176 | overlap 1167392 TGTAGCGAGAAAAAA GCGCAGGCC AAA GGCTGGCGT CAGTGGCTGGAAGAG TERM 1549 1168326 - 1168340 + G 77 -8.6 -4.08216 | GGAAAGTGCGCTTCT TCCTCA GGT TGAGGA TTTTCCGGACGCTGA TERM 1550 1168375 - 1168411 + G 76 -5 -4.72986 | gap 1, overlap 1168378 CGGCGTTTGTTATAT GTGGCGTTGACGCGCGC GCGT GCGCGGGTCTG-GCTGC TTTTTAATAAAGATA helD 1166434 - 1168488 + | DNA helicase IV TERM 1551 1168518 - 1168490 - T 88 -12.3 -3.61764 | opp_overlap 1168488 1168487 1168486, overlap 1168482 1168491 CGAGGAAGCCCTAAA GCGCGGGCGGTAC AGC ATCCCGCCCGCGT AGCGTTTATTTCAGG TERM 1552 1168517 - 1168491 - T 93 -15.8 -2.76737 | opp_overlap 1168488 1168487 1168486, overlap 1168482 1168490 GAGGAAGCCCTAAAG CGCGGGCGGTAC AGC ATCCCGCCCGCG TAGCGTTTATTTCAG mgsA 1168982 - 1168524 - | methylglyoxal synthase yccT 1169739 - 1169077 - | hypothetical protein TERM 1553 1169403 - 1169388 - G 77 -8.2 -4.07568 | opp_overlap 1169394 CGTCGCCGTCCAAAA GCGCCA GACG CGGCGC CGCGTTAAAATGCGA TERM 1554 1169643 - 1169615 - G 70 -6.6 -4.15044 | overlap 1169617 GCGCCGCGTAATAAA GAGCTGGACACC TTTTT GCCGTCCAGCAC CAGCAGATCAACCTC STM1078 1169910 - 1170326 + | putative cytoplasmic protein TERM 1555 1170366 - 1170329 - T 88 -8.5 -4.86731 | opp_overlap 1170337, overlap 1170330 GCTGGCGAAATAAAA GTTTAAATGGCCGGATA TCGC TTTCCGGCCTTTTAAAT ACAATCAGTTACGTA TERM 1556 1170365 - 1170330 - T 86 -12 -3.51557 | opp_overlap 1170337, overlap 1170329 CTGGCGAAATAAAAG TTTAAATGGCCGGATA TCGC TTTCCGGCCTTTTAAA TACAATCAGTTACGT TERM 1557 1170337 - 1170358 + T 83 -10.1 -4.1899 | opp_overlap 1170330 1170329 AATAAAAGTTTAAAT GGCCGGATA TCGC TTTCCGGCC TTTTAAATACAATCA yccV 1170688 - 1170371 - | putative inner membrane protein yccW 1171957 - 1170746 - | putative SAM-dependent methyltransferase STM1081 1172172 - 1172720 + | putative outer membrane protein TERM 1558 1173379 - 1173397 + G 80 -10.3 -3.89524 | opp_overlap 1173378 1173368 CAAATTGTTGAAGAG GTGCGCA TGTCC TGCGCAC TTTCTCAACTGCAAT STM1082 1172746 - 1173525 + | regulatory protein yccX 1173574 - 1173855 + | putative phosphohydrolase yccK 1174181 - 1173852 - | sulfurtransferase TusE TERM 1559 1174252 - 1174227 - R 91 -7.5 -5.15634 | overlap 1174231 CAGTGTAGCAAAAAA TAAAGCCCTGC ATAA GCAGGGCTGGA AGAGGGGAATGTCGA TERM 1560 1174248 - 1174231 - R 100 -12.7 -5.0917 | overlap 1174227 GTAGCAAAAAATAAA GCCCTGC ATAA GCAGGGC TGGAAGAGGGGAATG yccA 1174927 - 1174268 - | hypothetical protein TERM 1561 1175417 - 1175445 + r 100 -10.4 -5.41143 | gap 1, opp_overlap 1175420, overlap 1175420 TTCCGCCAGATTAAA CAA-GGGGTTACC GAAA GGTAGCCCCTTTG TTTTTTTAGGCGCTA TERM 1562 1175441 - 1175420 - R 83 -10.1 -4.04806 | opp_overlap 1175420 1175417 CGCCAGATTAAACAA GGGGTTACC GAAA GGTAGCCCC TTTGTTTTTTTAGGC TERM 1563 1175420 - 1175441 + r 100 -12.3 -5.20328 | opp_overlap 1175420, overlap 1175417 CGCCAGATTAAACAA GGGGTTACC GAAA GGTAGCCCC TTTGTTTTTTTAGGC pipA 1176228 - 1175548 - | pathogenicity island-encoded protein A pipB 1177325 - 1176450 - | secreted effector protein TERM 1564 1177716 - 1177704 - g 71 -4.8 -4.59109 | TAGATGGCGTAAAAA CCTG ATGAG CAGG AATACTTACACACTA TERM 1565 1177754 - 1177736 - g 72 -2.4 -4.84527 | CTTACACACTAAAAA TGCTCC CGCAAAC AGAGCA AAATGAGAGAGATGA STM1089 1177543 - 1177863 + | putative inner membrane protein pipC 1178214 - 1177873 - | pathogenicity island-encoded protein C TERM 1566 1177995 - 1178023 + g 72 -11.7 -2.71731 | opp_overlap 1177972, overlap 1177997 AAGCAGTATTGTCTG CGTCAGCGCCG ATAGTGA CGGCGCTGGTG TAGTTCAGACGTAAA sopB 1179916 - 1178231 - | secreted effector protein TERM 1567 1180282 - 1180294 + G 74 -3.4 -4.88228 | CAAGTAAGACCGTGA CGAA GAATA TTCG TTTTTCCTATTCCAT orfX 1180248 - 1180418 + | putative cytoplasmic protein STM1093 1180529 - 1180419 - | putative cytoplasmic protein pipD 1182107 - 1180638 - | pathogenicity island-encoded protein D TERM 1568 1181198 - 1181208 + g 85 -4.6 -5.14563 | TTCCCTGATAGTGAT TGCG TAG CGCG TTTTTTACTGCCGCC TERM 1569 1181712 - 1181722 + g 72 -2.4 -4.85599 | CTCAATGGCGTCTTC CGTG ATT CCCG TTTTTGTCACGTAAG copS 1183644 - 1182280 - | copper resistance protein copR 1184317 - 1183637 - | transcriptional regulatory protein YedW TERM 1570 1184580 - 1184570 - g 71 -8.2 -3.82208 | CAGCAAACAGGTAAA CCGG CGC CCGG CGTGGAGGTGGTACT STM1097 1184453 - 1184863 + | hypothetical protein TERM 1571 1185121 - 1185089 - T 76 -12 -2.50443 | overlap 1185088 TTAGATTGTATTAAT CGCCGCGATTTATG GCGAG CAAACATCGCGGCG GGAATAAAAATCTTC hpaC 1185708 - 1185196 - | 4-hydroxyphenylacetate catabolism hpaB 1187288 - 1185726 - | 4-hydroxyphenylacetate catabolism TERM 1572 1187007 - 1187023 + g 91 -12.3 -4.07568 | AGCATCACGCTGTTG GCGCAGA TCG TCTGCGC TTTTCGCCACGCGGA TERM 1573 1187210 - 1187224 + g 70 -3.4 -4.70266 | AAATATAAATTTCCC GCCCGT CCT GCAGGC TTTTTAAATACTCTT hpaR 1187946 - 1187506 - | 4-hydroxyphenylacetate catabolism TERM 1574 1187563 - 1187582 + g 76 -2.9 -5.02074 | gap 1, overlap 1187566 AATAAGATCGTCCAG CAGCAGCA TCAAT TGCTG-TG TTTTTTCGGGCGTGA TERM 1575 1188546 - 1188522 - g 72 -11.5 -3.06696 | overlap 1188545 GCCTGCCGGAAGAGA GCTTTTATCGC CCG GCGATTAAAGC GAAATGTCGCGATGG TERM 1576 1189207 - 1189197 - g 87 -8.2 -4.56775 | opp_overlap 1189201 1189204 ATCTGCGGGTAAAAA GCCG CGA CGGC CTGACGCCGATAGGC hpaG 1188221 - 1189510 + | 4-hydroxyphenylacetate catabolism TERM 1577 1189816 - 1189800 - g 72 -3.5 -4.82667 | opp_overlap 1189813 TCACCAGACTAAAAA CGTGCTG ATC CCGCGCG CCTCGCATAACTTCG hpaE 1189507 - 1190973 + | 4-hydroxyphenylacetate catabolism hpaD 1190975 - 1191826 + | 4-hydroxyphenylacetate catabolism hpaF 1191836 - 1192216 + | 4-hydroxyphenylacetate catabolism TERM 1578 1192437 - 1192416 - g 91 -10.1 -4.60889 | opp_overlap 1192410, overlap 1192403 1192418 AATCAGGCTGAAAAA CAGCGCGAA CAGA TTCGCGCAG TGTCGCTGGATTATC TERM 1579 1192435 - 1192418 - g 82 -11.3 -3.91506 | opp_overlap 1192410, overlap 1192403 1192416 TCAGGCTGAAAAACA GCGCGAA CAGA TTCGCGC AGTGTCGCTGGATTA hpaH 1192359 - 1193162 + | 4-hydroxyphenylacetate catabolism TERM 1580 1193205 - 1193181 - g 72 -2.1 -4.88129 | overlap 1193174 1193182 1193193 1193203 AAAAACGATGAAAAA TGCTTTCAAAG ACG CGTTAAAAGCG GGGCGTCCGCAAATC hpaI 1193173 - 1193964 + | 4-hydroxyphenylacetate catabolism TERM 1581 1194630 - 1194651 + G 73 -5.1 -4.65747 | overlap 1194628 TGGCAGTGGTTATTC CTGTTGGAA GGAT TTCCGTCAG TTTTGTTAGGCATTA hpaX 1194036 - 1195412 + | 4-hydroxyphenylacetate catabolism TERM 1582 1195528 - 1195562 + G 86 -6.5 -5.0538 | gap 1, overlap 1195529 GTATGGCGGATTTCT TTGGTCGTGAT-ATGC AGGC GCATCGCCACGACCAG TTTTTTCAAATGCAC TERM 1583 1195649 - 1195675 + G 71 -4.2 -4.63932 | GGCGCCGCTATTTGT GCTTACGCCGCC CTC GGTGCCGCATGC TTTTATTACCGAATC hpaA 1195422 - 1196318 + | 4-hydroxyphenylacetate catabolism TERM 1584 1196892 - 1196912 + G 71 -6.2 -4.25104 | gap 1 TTCCCCTTTCCCGGA CGGTGAAGC GTTT GCTT-ACCG TTTTGATACCCAGGG TERM 1585 1197081 - 1197068 - g 72 -3.8 -4.74103 | TTGGCAACGGAAAAA CGCT GGCTGA AGCG ATTGCGTCGCATCAC STM1109 1196332 - 1197270 + | putative periplasmic protein TERM 1586 1197320 - 1197290 - T 84 -10.4 -3.94409 | opp_overlap 1197289 1197294 1197309, overlap 1197291 1197294 CAGAGCAGGGATAAA CCCACGGGCTGACA TGA TGTCAGCCCGTTAT GCTTTTGGCGATCAG TERM 1587 1197319 - 1197291 - T 85 -13.9 -2.96164 | opp_overlap 1197289 1197294 1197309, overlap 1197290 1197294 AGAGCAGGGATAAAC CCACGGGCTGACA TGA TGTCAGCCCGTTA TGCTTTTGGCGATCA TERM 1588 1197316 - 1197294 - T 100 -17.8 -2.71325 | opp_overlap 1197289 1197294 1197309, overlap 1197291 1197290 GCAGGGATAAACCCA CGGGCTGACA TGA TGTCAGCCCG TTATGCTTTTGGCGA TERM 1589 1197294 - 1197316 + T 100 -17.8 -3.68359 | opp_overlap 1197294 1197291 1197290, overlap 1197289 1197309 GCAGGGATAAACCCA CGGGCTGACA TGA TGTCAGCCCG TTATGCTTTTGGCGA STM1110 1198040 - 1197678 - | hypothetical protein TERM 1590 1198674 - 1198645 - R 82 -11.4 -3.64703 | gap 1, opp_overlap 1198646, overlap 1198646 CCGGGTGCATGTAAA TCCG-GGGTGGGC AGAAA GCCCACCCTCGGT TTATTGCCTTTATCG TERM 1591 1198673 - 1198646 - R 87 -14.9 -2.78679 | gap 1, opp_overlap 1198646, overlap 1198645 CGGGTGCATGTAAAT CCG-GGGTGGGC AGAAA GCCCACCCTCGG TTTATTGCCTTTATC TERM 1592 1198646 - 1198673 + r 100 -14.9 -4.30933 | gap 1, opp_overlap 1198646 1198645 CGGGTGCATGTAAAT CCG-GGGTGGGC AGAAA GCCCACCCTCGG TTTATTGCCTTTATC yccD 1198999 - 1198694 - | chaperone-modulator protein CbpM cbpA 1199919 - 1198999 - | curved DNA-binding protein CbpA TERM 1593 1199510 - 1199528 + g 74 -7.4 -4.1552 | overlap 1199507 GAATAGCTAATCGTA CGCTGG TGCTCTT CCAGCG TTTCTTCCAGGAATA scsA 1200154 - 1200516 + | suppression of copper sensitivity protein A TERM 1594 1201691 - 1201702 + G 72 -3.6 -4.74103 | TGTTGTTTAGCGCCA GCCT GTTC GGGC TTTTTGAGTTCAGGC TERM 1595 1201850 - 1201887 + G 95 -14.1 -3.37612 | overlap 1201852 GCACGGCGGTCGCCG TGGCGCTCACGGCGTCG CTGC CGACGCTGTGGGGGCTG TTCCTTGCGCTTGGC TERM 1596 1201852 - 1201885 + G 100 -16.7 -3.25539 | overlap 1201850 ACGGCGGTCGCCGTG GCGCTCACGGCGTCG CTGC CGACGCTGTGGGGGC TGTTCCTTGCGCTTG scsB 1200565 - 1202451 + | suppression of copper sensitivity protein scsC 1202448 - 1203071 + | suppression of copper sensitivity protein TERM 1597 1203061 - 1203048 - f 83 -4.5 -5.27335 | overlap 1203049 GTGGTGAAAGAAAAA CTGGC GTCT GCCAA TGGCGGGTAAACTGC TERM 1598 1203073 - 1203100 + G 77 -4.8 -4.84359 | gap 1 CCAATGGCGGGTAAA CTGCGGCGTTGGC TGC GTGAA-GCCGCGG TTTTTCTGGCGCTCC TERM 1599 1203364 - 1203330 - g 86 -10.6 -4.19238 | GGCGGAAGGGGAAAA CGTCATGACCGTTGCG CTC CGCTCCGGCGATGACG CTGAGGTTGCCCGCT scsD 1203061 - 1203567 + | suppression of copper sensitivity protein TERM 1600 1203592 - 1203571 - f 82 -12.9 -3.03903 | opp_overlap 1203566 1203565 AAAACGTTCTGAATA TGCGCCGGG GTTT CCCGGCGCT AACGCGTTTACTGTA agp 1203700 - 1204941 + | glucose-1-phosphatase/inositol phosphatase TERM 1601 1204977 - 1204939 - T 76 -8.1 -4.09511 | gap 1, opp_overlap 1204935 1204943 1204947 1204948, overlap 1204942 AACACTGCTGCAAAA TAGC-CATATGCCCCCGC GCAG GCGGGGGCGTTTGTGTTA TACGTTTTTACGTTC TERM 1602 1204943 - 1204972 + T 100 -15.7 -3.34591 | opp_overlap 1204942 1204939, overlap 1204935 1204947 1204948 CTGCTGCAAAATAGC CATATGCCCCCGC GCAG GCGGGGGCGTTTG TGTTATACGTTTTTA TERM 1603 1204947 - 1204968 + T 100 -15.1 -4.28791 | opp_overlap 1204942 1204939, overlap 1204943 1204935 1204948 TGCAAAATAGCCATA TGCCCCCGC GCAG GCGGGGGCG TTTGTGTTATACGTT TERM 1604 1204948 - 1204967 + T 100 -16.4 -3.1619 | opp_overlap 1204942 1204939, overlap 1204947 1204943 1204935 GCAAAATAGCCATAT GCCCCCGC GCAG GCGGGGGC GTTTGTGTTATACGT yccJ 1205202 - 1204975 - | hypothetical protein wraB 1205819 - 1205223 - | TrpR binding protein WrbA ymdF 1206204 - 1206371 + | putative cytoplasmic protein TERM 1605 1206431 - 1206448 + F 100 -14.1 -6.02919 | TGTCATGCGCCACCG CCGCCGG ATTT CCGGCGG TTTTTTTGTTTATAA TERM 1606 1206948 - 1206931 - g 74 -3.4 -4.84527 | gap 1 TTGATAGATGAAAAA TCCGCGC TGATT GC-CGGA TGGGTGCACAGCGGG TERM 1607 1207067 - 1207083 + G 76 -2.9 -5.00616 | opp_overlap 1207021, overlap 1207068 CGGTAACCGGCGCGA CGCTTCG CGA TGAAGCC TTTTTTAACCAAACG ycdC 1206508 - 1207146 + | putative transcriptional repressor STM1123 1207538 - 1207143 - | putative periplasmic protein TERM 1608 1207580 - 1207563 - H 93 -9.1 -4.7373 | opp_overlap 1207563 TGACGCGAGTAAAAA GGCTCCA TTGA CGGAGCC TTAATTAACCACAGT TERM 1609 1207620 - 1207642 + H 75 -9.8 -3.59979 | TTGTCATCAGGCTGG CATTACCGCC AGC GGCGGCAGTG TTTACGCTCAGCGAA TERM 1610 1208017 - 1208073 + H 81 -12.2 -3.28791 | gap 2, overlap 1208018 CGTCCAGGTATTGCG CTCGCCGGTC-GGCCCCGG-TAGCAGGC GCT GCGTGCCGGCCTGGGCCAGATCGGCGAA TTGTCGGCAGAGCGT TERM 1611 1208018 - 1208072 + H 90 -15.7 -2.57132 | gap 2, overlap 1208017 GTCCAGGTATTGCGC TCGCCGGTC-GGCCCCGG-TAGCAGGC GCT GCGTGCCGGCCTGGGCCAGATCGGCGA ATTGTCGGCAGAGCG TERM 1612 1211409 - 1211421 + H 73 -7.7 -4.1585 | overlap 1211406 CGCAGGTAGCTCCGG TAGCG TAT CGCTA TTTTCCAGCTTGTCC TERM 1613 1212093 - 1212111 + G 70 -6.6 -4.19371 | overlap 1212108 TGACTATATTCTTGG CGGTCGCA GTC TGGGGCCG TTTGTTACGGCTTTA putP 1211980 - 1213488 + | major sodium/proline symporter TERM 1614 1213524 - 1213493 - T 86 -14.6 -2.65808 | opp_overlap 1213493 1213495, overlap 1213490 1213489 AGGCGGAATAACCGA CATGTCCGATAGCA TTAT TGCCATCGGACATA TTTTACCAGGCGGCG TERM 1615 1213493 - 1213524 + T 87 -10.2 -4.07568 | opp_overlap 1213493 1213490 1213489, overlap 1213495 AGGCGGAATAACCGA CATGTCCGATAGCA TTAT TGCCATCGGACATA TTTTACCAGGCGGCG TERM 1616 1213495 - 1213522 + T 88 -12.8 -3.63744 | opp_overlap 1213493 1213490 1213489, overlap 1213493 GCGGAATAACCGACA TGTCCGATAGCA TTAT TGCCATCGGACA TATTTTACCAGGCGG TERM 1617 1213530 - 1213555 + T 90 -15.5 -2.66964 | gap 1, opp_overlap 1213525, overlap 1213527 ATCGGACATATTTTA CCAGGC-GGCGT TAT ACGCCCGCCTGG TCCTCTGATAAGTCC TERM 1618 1214294 - 1214279 - T 74 -5.4 -4.56597 | overlap 1214288 GCGTCGTTTCAAAAA GCAAGC TAAG GCTTAC AAGGAAGCCAACCCT TERM 1619 1214347 - 1214330 - T 73 -11.3 -2.57132 | opp_overlap 1214328 1214325, overlap 1214329 GTGTGTGCGCATAAT CGCGTTC AAGA GAACGCG GGTGATGTATACCTA TERM 1620 1215127 - 1215137 + T 74 -8.2 -3.85698 | CAAAGACGACTGCGT GCGC TCG GCGC TTTGTCAGCGAACGC TERM 1621 1215185 - 1215208 + T 95 -14.6 -3.58905 | overlap 1215189 TATAGCATTGACTTT CAGAGCCCGG GAAA CCGGGCTTTG TTATCTATAAAGCAT TERM 1622 1215189 - 1215204 + T 100 -11.8 -4.42974 | overlap 1215185 GCATTGACTTTCAGA GCCCGG GAAA CCGGGC TTTGTTATCTATAAA STM1127 1216156 - 1215275 - | putative transcriptional regulator STM1128 1217937 - 1216441 - | putative sodium/glucose cotransporter TERM 1623 1216676 - 1216662 - G 74 -2.8 -4.86731 | CTCGTTTAAAGAAAA TGCCCA GCA TGAACA GACCGGTCATTGGCC TERM 1624 1218100 - 1218079 - R 79 -8.7 -4.24948 | TCATGAGATGTAAAA GGCAGAGCA TTTA TGCTCCACC AATGGTGATGCCCAG STM1129 1218954 - 1218274 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 1625 1218492 - 1218455 - G 77 -11.3 -3.58343 | opp_overlap 1218453 GTCACCATTGCCAAA TCTGGCTCAACCGGC GTGATGGG GCCGGTATAGCCAGA CAGTGTTGTACCAAT TERM 1626 1218886 - 1218913 + g 71 -6.3 -4.35518 | gap 1 AGGGCTGCCTGGTAC CGGTTGGCATGA GACAA TCA-GCCCACCG TTTTCGTGTACACTT TERM 1627 1219795 - 1219783 - g 100 -5.5 -5.81412 | CGTAGGGAAAAAAAA CAGTG AAT CACCG TTGCAGGTTTATAGC TERM 1628 1220586 - 1220604 + G 71 -6.1 -4.25056 | CGTCTGTAACCTCCT TTACCAT GCGTG ATGGTAA TTTATTAATAAAATA STM1130 1219460 - 1220620 + | putative inner membrane protein STM1131 1220666 - 1221358 + | putative outer membrane protein STM1132 1221641 - 1222921 + | putative sialic acid transporter TERM 1629 1223747 - 1223734 - g 81 -2.4 -5.41746 | overlap 1223738 AAGCGGGCAAAAAAA CACA CTTTCT TGTG CATGAAAGCCAGGCG STM1133 1222932 - 1224038 + | putative dehydrogenase TERM 1630 1224175 - 1224156 - f 100 -10 -4.9755 | ACATATAAGCAAAAA GCCCGTAC TTCT GTACAGGC TCTCAACTTAAATAT TERM 1631 1224359 - 1224340 - f 76 -4.2 -4.9755 | ACATATAAGCAAAAA GCCCTTAC TTCT GTACAGGC TCTCAACTTGAATAT TERM 1632 1224543 - 1224524 - f 76 -4.2 -4.9755 | ACATATAAGCAAAAA GCCCTTAC TTCT GTACAGGC TCTCAACTTGAATAT TERM 1633 1224727 - 1224708 - f 100 -10 -4.9755 | ACATATAAGCAAAAA GCCCGTAC TTCT GTACAGGC TCTCAACTTAAATAT ycdW 1225066 - 1226004 + | putative oxidoreductase TERM 1634 1226025 - 1226010 - f 86 -11.8 -3.5399 | opp_overlap 1226010 1226024 AGGATATTGATACAA CCCGGC GCGG GCCGGG TTTCGCTAAAAAACG TERM 1635 1226010 - 1226025 + F 86 -11.8 -3.64703 | opp_overlap 1226010, overlap 1226024 AGGATATTGATACAA CCCGGC GCGG GCCGGG TTTCGCTAAAAAACG TERM 1636 1226691 - 1226725 + G 80 -8.7 -4.08216 | gap 1, opp_overlap 1226700 TTTACGCTTGGCGAT TTCACCGAATGCCGGA AAAT TCTGG-ATGCGGTGAA TTTTCCGGAAGATCG ycdX 1226088 - 1226825 + | putative hydrolase ycdY 1226849 - 1227403 + | putative oxidoreductase component TERM 1637 1227794 - 1227804 + G 74 -3.2 -4.87892 | GTGTATCCAGGCAAA GCAG CTA TTGC TTTCTTTTGTTCCGG ycdZ 1227456 - 1227986 + | putative inner membrane protein TERM 1638 1228011 - 1227991 - T 100 -14 -5.86976 | opp_overlap 1227991 TCACAAAATAAAAAA GCGTGGGG TTCTT CCCCACGC TTTGTCGTATTCATC TERM 1639 1227991 - 1228011 + T 100 -14 -4.07455 | opp_overlap 1227991 TCACAAAATAAAAAA GCGTGGGG TTCTT CCCCACGC TTTGTCGTATTCATC csgG 1228858 - 1228025 - | putative curli operon transcriptional regulator csgF 1229301 - 1228885 - | curli assembly protein CsgF csgE 1229723 - 1229328 - | curli assembly protein CsgE csgD 1230378 - 1229728 - | DNA-binding transcriptional regulator CsgD TERM 1640 1230121 - 1230142 + g 73 -5.3 -4.62471 | opp_overlap 1230121 GTCAGGGGTATTTAA CAATAATGT TTTT ATATTATTG TTTTTGCGGCTTAAA TERM 1641 1230517 - 1230504 - H 73 -2.5 -5.24799 | opp_overlap 1230504 CCAGAAAGAGAAAAA TATTT ACGA AAATA CTTTTAACTGTTTTC TERM 1642 1230703 - 1230715 + H 72 -4.9 -4.60317 | ATTATAATAATTCAT TGATT TTT AATCA TTTTAATTATTATAT csgB 1231133 - 1231588 + | curlin minor subunit csgA 1231630 - 1232085 + | cryptic curlin major subunit TERM 1643 1232126 - 1232111 - f 100 -10.4 -5.7946 | opp_overlap 1232111 GCGCTAATAAAAAAA CAGGGC ATAA GCCCTG TTTTTTTTCGGGAGG TERM 1644 1232111 - 1232126 + F 100 -10.4 -5.75342 | opp_overlap 1232111 GCGCTAATAAAAAAA CAGGGC ATAA GCCCTG TTTTTTTTCGGGAGG csgC 1232147 - 1232473 + | putative autoagglutination protein ymdA 1232604 - 1232924 + | putative periplasmic protein STM1147 1233013 - 1233552 + | hypothetical protein TERM 1645 1233572 - 1233558 - gT 77 -7.8 -4.36914 | CCCTGCCTGATAAAA CACGCC TGG AGCGTG CCGTTGAACCGCTAT TERM 1646 1234240 - 1234228 - gT 70 -9.1 -3.31144 | opp_overlap 1234226 1234229, overlap 1234236 1234239 CCGTTATCTGCATAA GCTGG AAA CCAGC CAGTTTATGGCGGAT TERM 1647 1234779 - 1234794 + GT 74 -7.6 -4.07568 | opp_overlap 1234792 GTGAAACGCTGGCGA CGCTTA TCCA TAAGCG TTTTACACAGAGCCA ymdC 1233488 - 1234975 + | putative phospholipase mdoC 1236146 - 1234992 - | glucans biosynthesis protein mdoG 1236418 - 1237953 + | glucan biosynthesis protein G TERM 1648 1238053 - 1238016 - g 77 -8.6 -4.09685 | gap 3, opp_overlap 1238048, overlap 1238020 CGGCATTGCCGAAAA CT-GACATCC-GCGCCGTG CAT CA-GGCGCTGGATGCCGAG CATCGGACTTACTCG TERM 1649 1238358 - 1238333 - g 72 -3.9 -4.7497 | opp_overlap 1238344, overlap 1238334 GCGAGCGAGCAAAAA TGGCGTACCGT CGGC ACTATACGCCG CTATATTTTGTTAAT TERM 1650 1238944 - 1238919 - g 73 -6.1 -4.37711 | opp_overlap 1238920 GTATGAAACGCAAAA GCGGCAATATT GACG ATTTTTGCCGC CGCTGGGGCAATCAG mdoH 1237946 - 1240489 + | glucosyltransferase MdoH TERM 1651 1240537 - 1240519 - f 93 -10.3 -4.62783 | opp_overlap 1240519 GAGTGAGGTGAAAAA TACCGGC GTGAT GCCGGTA TTTTTATAGTGAAAT TERM 1652 1240519 - 1240537 + F 100 -11 -4.91511 | opp_overlap 1240519 GAGTGAGGTGAAAAA TACCGGCG TGA TGCCGGTA TTTTTATAGTGAAAT yceK 1240563 - 1240790 + | hypothetical protein msyB 1241165 - 1240791 - | hypothetical protein yceE 1242461 - 1241247 - | drug efflux system protein MdtG TERM 1653 1242591 - 1242610 + r 78 -12.2 -2.64616 | opp_overlap 1242591 AAAAGAGGGGAAAAA TTGCAGCC TGAC GGCTGCAA TCCTGTCAATAGCGC TERM 1654 1242610 - 1242591 - R 100 -12.2 -4.69464 | opp_overlap 1242591 AAAAGAGGGGAAAAA TTGCAGCC TGAC GGCTGCAA TCCTGTCAATAGCGC htrB 1243536 - 1242616 - | lipid A biosynthesis lauroyl acyltransferase yceA 1243756 - 1244808 + | hypothetical protein TERM 1655 1244850 - 1244811 - T 79 -12.1 -3.13403 | opp_overlap 1244814, overlap 1244809 1244833 TCCGGCTGAGTAATA TTTTGCCGGATAGCGGC GTAAAG GCCGCTATCCGGCATTT CGCCAGGCGTTACTT TERM 1656 1244814 - 1244847 + T 100 -22.6 -3.53761 | opp_overlap 1244811 1244809 1244833 GGCTGAGTAATATTT TGCCGGATAGCGGC GTAAAG GCCGCTATCCGGCA TTTCGCCAGGCGTTA yceI 1245435 - 1244860 - | hypothetical protein TERM 1657 1245230 - 1245241 + g 85 -2.2 -5.52384 | overlap 1245228 GTCACGTTCACTTTG TCTG CCGA CGGA TTTTTTTCGTCAAAA STM1158 1246004 - 1245432 - | putative inner membrane protein yceO 1246380 - 1246267 - | putative inner membrane protein TERM 1658 1246415 - 1246397 - R 83 -9.5 -4.1822 | GCTTACCTTAATAAA CAGCCCC TTTAC GGGGCCG ACAAATTATTGGCTA TERM 1659 1246451 - 1246441 - R 72 -8.2 -3.76413 | GGCTAAAACGGGAAA GCCG GAA CGGC GTCAGATCAAAGGAG solA 1247539 - 1246421 - | N-methyltryptophan oxidase TERM 1660 1246657 - 1246641 - G 71 -7.9 -3.96216 | opp_overlap 1246641 GCCCCATGTAAACAA CCGCCGA TAC CCGGCAG TACGTTACGCAGGAA TERM 1661 1247150 - 1247131 - G 80 -12.2 -3.36694 | overlap 1247129 AGTCAGCTTCAAACA GCCCGATA TAAT TATCGGGC ACGCGAATTTCCGGC TERM 1662 1247628 - 1247613 - R 71 -10.4 -2.73799 | overlap 1247610 1247609 GCCAGAAATAAGTGA GGCACC TTAC GGTGCC TGAGAGAGGGGGAGC bssS 1247906 - 1247652 - | biofilm formation regulatory protein BssS TERM 1663 1248169 - 1248154 - R 100 -11.8 -5.63517 | TGCGCAAATAAAAAA GCCGGG GCGA CCCGGC AAACATACATCACTG dinI 1248441 - 1248196 - | DNA damage-inducible protein I pyrC 1249561 - 1248515 - | dihydroorotase TERM 1664 1249658 - 1249643 - R 100 -11.8 -5.81412 | TGCACGTAAAAAAAA GGGCGC GAGC GCGCCC TCCGAAATCAATTGG yceB 1250226 - 1249666 - | hypothetical protein TERM 1665 1250298 - 1250270 - R 76 -8.2 -4.0492 | gap 1 TAATCTTGACACAAA GCAGCATGT-CGC GCCA GCGGACATGGTGC CACTAGAAAAAGCTG TERM 1666 1250341 - 1250319 - R 100 -10.6 -4.7657 | opp_overlap 1250334 GAAAAAGCTGAAAAA GGCGGCAA GAAAGGG TTGCCGCC TGGCGGGAGTTAGAT grxB 1250998 - 1250351 - | glutaredoxin 2 TERM 1667 1250849 - 1250861 + g 74 -7.7 -4.10161 | ATCATCTTTTTGCAG GATGG GCA CCATC TTTTGACCAATCATC yceL 1252270 - 1251062 - | multidrug resistance protein MdtH TERM 1668 1251635 - 1251645 + g 70 -5.4 -4.43844 | CAGCGTCAGCACGTA GGTT ACA AACC TTTTATCGCTCATGA rimJ 1252507 - 1253091 + | ribosomal-protein-S5-alanine N-acetyltransferase TERM 1669 1253489 - 1253464 - g 81 -11.8 -3.53012 | TGCGTGGCGCGCAAA CGCCCGGCGA GTTGCG TAGCCGGGCG TCGCGGATGCATGAA yceH 1253127 - 1253774 + | hypothetical protein mviM 1253776 - 1254699 + | putative virulence protein TERM 1670 1255110 - 1255122 + G 90 -6.2 -5.28826 | overlap 1255119 TTTTGGCGCAGGGAT GGCG ACCGA CGCC TTTTTTGTGGCGTTT mviN 1254964 - 1256538 + | putative virulence protein TERM 1671 1256571 - 1256544 - T 71 -10.7 -2.64472 | gap 1, opp_overlap 1256542, overlap 1256540 GACGGCGTAAATTCA GTGCCTGATAGC GCTGT GCTATCAGGC-C TACAAGGCATTCAGG flgN 1257041 - 1256619 - | putative FlgK/FlgL export chaperone TERM 1672 1256776 - 1256788 + g 76 -3.3 -5.1101 | TGCTGGTTGAGGTCG CGAAG ATG CTGCG TTTTTTCGGTAATCG flgM 1257339 - 1257046 - | anti-sigma28 factor FlgM TERM 1673 1257229 - 1257242 + g 81 -3.8 -5.14563 | overlap 1257232 CGTTACGCTGGCGCT CGTC GCGGCG GACG TTTTTTCCTGACGCG TERM 1674 1257232 - 1257257 + g 78 -2.5 -5.24129 | gap 1, overlap 1257229 TACGCTGGCGCTCGT CGCGGC-GGA CGTTTTT TCCTGACGCG TTTTTTGTACCGGCG flgA 1258090 - 1257431 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1675 1257496 - 1257509 + g 77 -8.1 -4.07568 | overlap 1257496 TTTGACCCGATGTCA TGCGC ACGC GCGCA TTTTGCGCGACGGCA TERM 1676 1258066 - 1258056 - G 74 -8.2 -3.92324 | overlap 1258057 GGGCTGAACAGCAAA GCCG CCA CGGC GAATCCTCGTTTTAA TERM 1677 1258164 - 1258174 + H 71 -6.8 -4.1552 | CGCAATAAATAGCGA CGCA TTT TGCG TTTATTCCGGCGATA flgB 1258247 - 1258663 + | flagellar basal body rod protein FlgB flgC 1258667 - 1259071 + | flagellar basal body rod protein FlgC flgD 1259083 - 1259781 + | flagellar basal body rod modification protein TERM 1678 1260665 - 1260653 - g 85 -9.1 -4.45544 | overlap 1260663 CGCCACCAATCAAAA CGGCT ATA AGCCG GGCGACCTGGTGAGC flgE 1259808 - 1261019 + | flagellar hook protein FlgE TERM 1679 1261134 - 1261175 + G 74 -11.5 -3.18507 | gap 1 CTAATGCCTCAACGC CGGGCTTTCGCGCGCAGC TTAACGC GCTACGCGCG-GTGCCCG TTGATGGCCTCTCTT flgF 1261040 - 1261795 + | flagellar basal body rod protein FlgF flgG 1261809 - 1262591 + | flagellar basal body rod protein FlgG TERM 1680 1262594 - 1262625 + F 75 -11.4 -3.09004 | overlap 1262589 GACGCAACTCTAAGG GGCCGCCGGTGGGG GATA CGCCACCGGCTCCC TGATTTTGAAGATGA TERM 1681 1262671 - 1262655 - g 70 -2.9 -4.75776 | overlap 1262657 1262658 AAGGTAATGCAAAAA TACGCGC TTC ACGCTTA CCCAGTTATGGCCCT flgH 1262646 - 1263344 + | flagellar basal body L-ring protein flgI 1263356 - 1264453 + | flagellar basal body P-ring protein TERM 1682 1264903 - 1264871 - g 100 -21.3 -4.24606 | opp_overlap 1264898 AAGCCATACCGAAAA CGCCGGACAGCAGCG ATG CGCCGCTCTCCGGCG ACAGTAAAGACTTTC TERM 1683 1264972 - 1264961 - g 74 -7.2 -4.20516 | opp_overlap 1264960 TGGCCAGCGAACAAA GCGG GGTG CCGC ATCATCTGATTCTGG flgJ 1264453 - 1265403 + | peptidoglycan hydrolase TERM 1684 1265756 - 1265742 - g 81 -8.6 -4.24342 | overlap 1265755 CGCGCTATGAACAAA TGTCGA AAA TCGACA ACCTGCTGGCCGATA flgK 1265468 - 1267129 + | flagellar hook-associated protein FlgK TERM 1685 1267826 - 1267816 - g 87 -2.4 -5.61881 | GTGGAAAAAGAAAAA GCCG CTG CCGC CATTGATAAAACCAA flgL 1267144 - 1268097 + | flagellar hook-associated protein FlgL TERM 1686 1268141 - 1268169 + T 100 -14.6 -5.55664 | TGGATATGTTTTGTC TGCCCGCGCC ATCCACCCC GGCGCGGGCA TTTTTTTAGTCGTCA TERM 1687 1268335 - 1268318 - T 100 -12.7 -5.25803 | opp_overlap 1268318 AAGGGGCATAAAAAA GCCGACC TGGC GGTCGGC TTTGTATCAGCATTT TERM 1688 1268318 - 1268335 + T 95 -12.7 -4.05322 | opp_overlap 1268318 AAGGGGCATAAAAAA GCCGACC TGGC GGTCGGC TTTGTATCAGCATTT rne 1271557 - 1268354 - | ribonuclease E TERM 1689 1269751 - 1269763 + g 76 -3.3 -5.11112 | GCTTGCGACGATCCT GCTGA CGC TCCGC TTTTTCTTCCGCTTT rluC 1272131 - 1273090 + | 23S rRNA pseudouridylate synthase C STM1188 1273246 - 1273989 + | putative inner membrane lipoprotein TERM 1690 1274268 - 1274250 - T 72 -5.9 -4.4009 | CCCTATGGGATAAAA CGCACCG TACAT CGGTTCG TAATACCAATGCTTT TERM 1691 1274487 - 1274473 - T 83 -10 -4.13945 | opp_overlap 1274472 1274471 1274467 AGCGGTATTTGAAAA GCCTAC AGA GTAGGC CGTTTATTGCTGTAG maf 1275075 - 1274491 - | Maf-like protein TERM 1692 1275205 - 1275233 + H 83 -10.3 -3.74077 | opp_overlap 1275211, overlap 1275211 GTGTGCGAATTATTG GCAAAAGGCAACC GCA GGCTGCCTTTTTC TTTGACTATATGACG TERM 1693 1275211 - 1275227 + H 95 -7.9 -5.31519 | opp_overlap 1275211, overlap 1275205 GAATTATTGGCAAAA GGCAACC GCA GGCTGCC TTTTTCTTTGACTAT TERM 1694 1275227 - 1275211 - H 83 -10.1 -4.12902 | opp_overlap 1275211 1275205 GAATTATTGGCAAAA GGCAACC GCA GGCTGCC TTTTTCTTTGACTAT yceD 1275273 - 1275794 + | hypothetical protein rpmF 1275846 - 1276019 + | 50S ribosomal protein L32 TERM 1695 1276990 - 1276979 - g 90 -5.8 -5.24129 | GTTGGTTACAAAAAA GCCT GACG AGGC GATTCAGTCACCTCA plsX 1276153 - 1277232 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 1277312 - 1278265 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1696 1278473 - 1278456 - g 70 -3.3 -4.74539 | gap 1, opp_overlap 1278456, overlap 1278457 AAGAACTGAATAAAA CCTGGCAG ACG CAGCC-GG CGTTATTAACCGCTT TERM 1697 1278493 - 1278506 + G 71 -9.5 -3.53012 | opp_overlap 1278483 ATTAACCGCTTCCGT CGCGC TTTG GCGCG TTTGGCAGCAGCAGG fabD 1278281 - 1279210 + | acyl carrier protein S-malonyltransferase fabG 1279223 - 1279957 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 1280113 - 1280349 + | acyl carrier protein TERM 1698 1280385 - 1280357 - f 71 -9.6 -3.15056 | gap 1, opp_overlap 1280358 1280361, overlap 1280355 AGGCGTAAGTGAACA TCTCCAGGCGGTC GTTC GACCGCCTG-AGT TTTATCTTTTTGTCC TERM 1699 1280358 - 1280384 + F 100 -13.1 -5.02287 | gap 1, opp_overlap 1280357 1280355, overlap 1280361 GGCGTAAGTGAACAT CTCCAGGCGGTC GTTC GACCGCCTG-AG TTTTATCTTTTTGTC TERM 1700 1280361 - 1280382 + F 90 -15.9 -2.72919 | opp_overlap 1280357 1280355, overlap 1280358 GTAAGTGAACATCTC CAGGCGGTC GTTC GACCGCCTG AGTTTTATCTTTTTG TERM 1701 1281104 - 1281079 - g 85 -12.5 -3.51329 | GACCCGCAACGATAA CCCACAGGCGG CGAG CCGTCCGTGGG ATAAAGAACGCGATG fabF 1280435 - 1281676 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1702 1281722 - 1281706 - f 81 -5 -5.17744 | opp_overlap 1281706, overlap 1281700 AGACATTAATAAAAA GGTCCG CTTGT CGGGCC TTTTTTATCAGGCAT TERM 1703 1281706 - 1281722 + F 87 -7.2 -5.24531 | opp_overlap 1281706 1281700 AGACATTAATAAAAA GGTCCG CTTGT CGGGCC TTTTTTATCAGGCAT pabC 1281800 - 1282609 + | 4-amino-4-deoxychorismate lyase TERM 1704 1282704 - 1282687 - g 77 -11.3 -3.57144 | GTGGGGATGTGGAAA GTTCGCC ATCT GGCGAAC AGCACGTTACTTATT yceG 1282612 - 1283634 + | hypothetical protein TERM 1705 1284081 - 1284068 - g 83 -9.5 -4.08692 | opp_overlap 1284070 1284077 GAAGTCGGGCTAAAA CGCGC CAGA GCGCG CGGCGATTTGGATCG tdk 1283624 - 1284265 + | thymidylate kinase TERM 1706 1284318 - 1284301 - g 76 -5.6 -4.72272 | CCCGCCTATGAAAAA CTGGTA GAAAGT TACCAG GCGGGACGTGGGCAC TERM 1707 1284886 - 1284918 + G 78 -11.9 -3.16055 | overlap 1284877 CTGTTGCAGTCTGAA CGCTGGGCGCAGCGT GAG GCGCTGTGTCAGGCG TTAATGGACAGTTTG holB 1284262 - 1285266 + | DNA polymerase III subunit delta' TERM 1708 1285598 - 1285609 + G 71 -7.2 -3.98016 | opp_overlap 1285598 1285597 CCTGAGACCAAAATC CGCC AGCA GGCG TCTTTTATTCATCAT ycfH 1285277 - 1286074 + | putative metallodependent hydrolase TERM 1709 1286146 - 1286119 - f 86 -11.2 -3.6834 | opp_overlap 1286116 AACAAAACGCGTAAA GTTCACCGCCAC AAAA GGGGCGGTGAGC GAGCTTATGGAAACA TERM 1710 1287213 - 1287196 - g 74 -6.9 -4.24002 | opp_overlap 1287196 TGCTAAACCGGAAAA CCGCGCA AAAG TGGGCGG TATCATGATTTCCGC ptsG 1286369 - 1287802 + | glucose-specific PTS system IIBC components TERM 1711 1287829 - 1287846 + T 100 -12.7 -5.14965 | opp_overlap 1287829, overlap 1287841 1287843 GTTGGGGAGAATTAA GGCAGCC ATTC GGCTGCC TTTTTTAATGGCGCT TERM 1712 1287846 - 1287829 - T 85 -12.7 -3.44146 | opp_overlap 1287829 1287841 1287843 GTTGGGGAGAATTAA GGCAGCC ATTC GGCTGCC TTTTTTAATGGCGCT fhuE 1290061 - 1287887 - | ferric-rhodotorulic acid outer membrane transporter ycfF 1290403 - 1290762 + | purine nucleoside phosphoramidase ycfL 1290765 - 1291139 + | putative outer membrane lipoprotein TERM 1713 1291179 - 1291163 - g 72 -2.1 -4.91109 | opp_overlap 1291165 1291167, overlap 1291164 1291167 TTTTGATGACAAAAA TGCATCG CTA CGCTGCC ATTGCTGCGCTGGCG ycfM 1291153 - 1291791 + | putative outer membrane lipoprotein TERM 1714 1291801 - 1291822 + G 76 -10.9 -3.64984 | gap 1, overlap 1291799 CAATAATCCCTTAAC GCGCGACGAG ATC CT-GTCGCGC TATTTTCCCCAGTAT TERM 1715 1291997 - 1292009 + G 95 -6.2 -5.31275 | TTGCCGGCCAGTCTT GCGC CGCGA GCGC TTTTTTATACTCCAG thiK 1291772 - 1292596 + | thiamine kinase TERM 1716 1293048 - 1293030 - g 84 -8.8 -4.2828 | opp_overlap 1293029 GCCGATCCAGCAAAA GCGTTGGC AAT GGCAACGC GCTTTATTGACGGCA TERM 1717 1293501 - 1293511 + G 70 -6.8 -4.08706 | opp_overlap 1293501 1293495 CCGATCAAAGCAGAA CGTG TTA CACG TTTGTATCATAAAGG nagZ 1292607 - 1293632 + | beta-hexosaminidase ycfP 1293657 - 1294199 + | hypothetical protein TERM 1718 1294238 - 1294253 + F 100 -10.4 -5.67063 | opp_overlap 1294238 TCAGTGACCGGATAA CCAGCC TTGC GGCTGG TTTTTTTATGCTCAA TERM 1719 1294253 - 1294238 - f 77 -10.4 -3.33492 | opp_overlap 1294238 TCAGTGACCGGATAA CCAGCC TTGC GGCTGG TTTTTTTATGCTCAA TERM 1720 1294387 - 1294426 + F 77 -10.4 -3.41982 | opp_overlap 1294383, overlap 1294416 CATTAACGTAACTTG TTGTTAATTAAAGGCTAT GCTA ATAACTTTTAATTAACAA TTGGTTAATAAATTT TERM 1721 1294563 - 1294553 - g 89 -3.2 -5.4505 | GGGCGCAAGAAAAAA GCGA AAA TCAC GCTGGTAGACAGAAA ndh 1294454 - 1295758 + | respiratory NADH dehydrogenase 2 TERM 1722 1295766 - 1295797 + F 90 -13.8 -3.36878 | gap 1 TGCATTAATTTCTCT GCGTCTCACCGGC TGCTCGC GCCGGTGAG-CGC TTCTCCATCACTCGC ycfJ 1295937 - 1296476 + | hypothetical protein TERM 1723 1296499 - 1296525 + T 100 -10.1 -5.93809 | opp_overlap 1296499 GTACTCTGCAAGTTA GCCCCTCATTC GCTCA GGCTGAGGGGC TTTTTTTTATCCGAA ycfQ 1297186 - 1296551 - | putative transcriptional repressor TERM 1724 1296650 - 1296662 + g 71 -6.3 -4.24786 | GCTGATCGACATTCC CTGTA AAA TACAG TTTATATATTCTGCG ycfR 1297428 - 1297685 + | putative outer membrane protein TERM 1725 1297735 - 1297756 + T 100 -15.9 -5.28176 | opp_overlap 1297735 CAATAAAAAGAAAAA GCCTCGCGA TGCA TCGCGAGGC TTTTTTGTCGGTCAG TERM 1726 1297756 - 1297735 - T 100 -15.9 -5.74684 | opp_overlap 1297735 CAATAAAAAGAAAAA GCCTCGCGA TGCA TCGCGAGGC TTTTTTGTCGGTCAG ycfS 1298747 - 1297782 - | putative periplasmic protein TERM 1727 1298533 - 1298561 + g 76 -3.2 -5.03314 | gap 1, opp_overlap 1298540, overlap 1298535 ATGCCGGGGTTGGCC TGTAAC-AGGGCT AAAA AGCCCACGTTATA TTTTTTGGCGATCGC TERM 1728 1298888 - 1298860 - R 72 -10.3 -2.85069 | gap 1, overlap 1298857 1298855 AATTTGTAAAGATTA GGCCGGACG-CA GAGTAA TGACGCCCGGCC TGACGCTTATGCAAT mfd 1302341 - 1298895 - | transcription-repair coupling factor TERM 1729 1299857 - 1299869 + g 83 -10.5 -4.01564 | overlap 1299847 GCACCAGTTCCGCCA GCCGC TCT GCGGC TTTCTGAATATTTTC TERM 1730 1300237 - 1300258 + g 70 -6.5 -4.16904 | gap 1, overlap 1300238 AGAATATCGATCTTA CCCTCGGCGG CTT CCGCC-AGGA TTTGTGTCTGCTCTT TERM 1731 1300680 - 1300709 + g 82 -11.4 -3.85698 | gap 1 TTCCGCCGCTTTCTG CCGGGCGCGCGAC CAGGC GTCGC-CGCCCAG TTTATGCAGAGGCGC TERM 1732 1301200 - 1301186 - G 90 -4.2 -5.36441 | TTTCCACAGAAAAAA TCACCG GAC CGCTGA AAGATTCGAGGAACT TERM 1733 1301931 - 1301945 + g 90 -5.6 -5.14563 | opp_overlap 1301896, overlap 1301896 1301895 GCGCAGAGCGTCGCG GGACAG CCG CTGGCC TTTTTTCATCACCAG TERM 1734 1302315 - 1302329 + g 75 -6.4 -4.58395 | GCCCGCTTTTGTCGG CAGCGT GTA ACGTTG TTTTTCAGGCATAAC ycfU 1302679 - 1303878 + | outer membrane-specific lipoprotein transporter subunit LolC lolD 1303871 - 1304572 + | lipoprotein transporter ATP-binding subunit ycfW 1304572 - 1305816 + | outer membrane-specific lipoprotein transporter subunit LolE TERM 1735 1306723 - 1306734 + G 78 -2.2 -5.1615 | gap 1, overlap 1306679 GGATGCAGGTGGGAT GC-GC GGT GCTGC TTTTTTACATCTTAC ycfX 1305845 - 1306756 + | N-acetyl-D-glucosamine kinase cobB 1306775 - 1307596 + | NAD-dependent deacetylase potD 1308724 - 1307678 - | spermidine/putrescine ABC transporter periplasmic substrate-binding protein TERM 1736 1308744 - 1308758 + r 72 -8.5 -3.75115 | opp_overlap 1308743, overlap 1308740 CGTCCCCTGAATTAC GGGCC TTATC GGCCC TTGGTTTTATCACGA potC 1309528 - 1308749 - | spermidine/putrescine ABC transporter membrane protein TERM 1737 1309285 - 1309262 - G 81 -11.7 -3.53012 | TGGCTTCCCGCGAAA GCGGTAGCG ATAAAG CGCCACCGC GGTTAACGAGCCAAT TERM 1738 1309876 - 1309854 - R 73 -2.1 -5.26316 | gap 1 TGATTTTATAAAAAA CAACATAAAC AGCC GCTT-TGTTG TTCTGAGCGAACGTG sifA 1310854 - 1309844 - | secreted effector protein TERM 1739 1310054 - 1310073 + g 74 -2.2 -5.09895 | overlap 1310056 AAACGTCTTATCCGC TAGTAAAA CCTC TTTTACCA TTTTTTCAATAGGTA TERM 1740 1310239 - 1310249 + g 70 -3.2 -4.6971 | GAATTTTCGCTGCCA GGTA GGT TGCC TTTTCTTGCGCTTTC potB 1312046 - 1311183 - | spermidine/putrescine ABC transporter membrane protein TERM 1741 1311231 - 1311219 - G 76 -10.5 -3.67597 | CTTCTTATTCAATAA GCGGG AAG CCCGC CAGTAAATCAACAGC potA 1313166 - 1312030 - | putrescine/spermidine ABC transporter ATPase protein TERM 1742 1312785 - 1312811 + g 84 -5.7 -5.09895 | opp_overlap 1312769, overlap 1312773 GCAGCGCATCGGTCA CGCGAGGCGCT ATCTC GGCGGCTGGCG TTTTTTGCATCCGTA TERM 1743 1313604 - 1313582 - g 72 -4.1 -4.76892 | gap 1 ACATTAAGTGAAAAA GGGA-CGTTG ATGG CGACGCTCCC GGCCAATGTTGAGGG pepT 1313417 - 1314646 + | peptidase T TERM 1744 1314681 - 1314708 + G 100 -13.6 -4.87665 | TGAAGCGTTTTATTA TTTATGGCGGGA TATT TTCCGCCATAAA TTTTTCTGCCTGGAG TERM 1745 1315337 - 1315350 + G 76 -3.1 -5.00616 | gap 1 ACCTGGGATAATCGT GA-GCG CGT CGCCTC TTTTTTGCAGCAGAA TERM 1746 1315694 - 1315679 - g 90 -10.4 -4.27117 | opp_overlap 1315673 CTGGCAGAATATAAA CGTCGG CAGT CCGACG TATCAATGGTGTTGT TERM 1747 1315948 - 1315974 + G 70 -9.5 -3.41053 | gap 1, opp_overlap 1315948 CGATCCGCAATATAA CGAT-GTCGCCA AACC TGGCGGCGATCG TTGTGGATAGTTTGC STM1228 1314650 - 1315984 + | putative periplasmic protein ycfD 1317145 - 1316024 - | putative cytoplasmic protein TERM 1748 1316863 - 1316817 - G 72 -12.2 -2.85378 | overlap 1316807 AAGGAGATCATCAGA TCGTCGATACGCCAGTCCGGCA GAG CGCGGAACGGGCGCATCAACGC GGCGGTGGGTTCGTG phoQ 1318689 - 1317226 - | sensor protein PhoQ TERM 1749 1317546 - 1317556 + g 74 -6.8 -4.25104 | CGTTGCCCATCACTT CGAC AAA GTCG TTTTGCTCGCCGACA phoP 1319363 - 1318689 - | DNA-binding transcriptional regulator PhoP TERM 1750 1319479 - 1319449 - R 76 -9.1 -3.67724 | overlap 1319447 1319450 TAAACCAGACAAATA GTCACCCTCTTTC TGAAG AAAAGAGGGTGAG GCAGGCATTATTTAA TERM 1751 1319478 - 1319450 - R 79 -12.6 -2.7955 | overlap 1319449 1319447 AAACCAGACAAATAG TCACCCTCTTTC TGAAG AAAAGAGGGTGA GGCAGGCATTATTTA purB 1320857 - 1319487 - | adenylosuccinate lyase TERM 1752 1320530 - 1320548 + g 81 -3.8 -5.27335 | gap 1, overlap 1320530 1320531 CGGAAACGTCATGTA G-CGCCG GGATCG CGGCGAC TTTTTCTTTCAGGAA TERM 1753 1320800 - 1320782 - G 71 -4.4 -4.58395 | opp_overlap 1320782 1320783 1320786, overlap 1320783 CGTATTCGCTAAAAA TTCCGCGC AGC GCGCTGAC TTTATCGCCGTAGCG ycfC 1321508 - 1320861 - | hypothetical protein TERM 1754 1321580 - 1321531 - R 72 -2.8 -4.93877 | opp_overlap 1321531 1321538 TTGTATCAAATAAAA TACACTTCATCTTTTAAGCCGC TTTGAG GCGACTTGAATGGTGTTGTGTA TTGAATAATCAGACC trmU 1322695 - 1321589 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase ymfB 1323210 - 1322749 - | putative MutT-like protein TERM 1755 1322994 - 1322968 - G 74 -2.2 -5.12068 | opp_overlap 1322982 GATAGCGAATAAAAA GCGCAGGA ACGGGGTTTTA TCCGGCGC AATCCACTGATGCAT STM1236 1323551 - 1323222 - | putative periplasmic protein ymfC 1324213 - 1323548 - | putative ribosomal large subunit pseudouridine synthase TERM 1756 1323919 - 1323944 + g 72 -11.2 -3.14132 | gap 1 GTTTGCCCGGTTGCG TGA-GGCGCGC CTGCA GCGCGCCGTCA TTAGTCAGCACCAAA TERM 1757 1324161 - 1324173 + g 76 -2.7 -5.11613 | overlap 1324162 CGCTTAACGTAGTGA TTTCT AAA AGAAG TTTTTTGCATGGTGT TERM 1758 1325199 - 1325188 - g 71 -7.2 -3.965 | GCTGAAAATTAAGAA CCCG AACA CGGG TAAAGAGATCGTGGT icdA 1324385 - 1325635 + | isocitrate dehydrogenase TERM 1759 1325685 - 1325655 - f 100 -14.9 -4.63542 | opp_overlap 1325655 1325661, overlap 1325661 GATAATTGTTAAAAA CAAAAACGGGGAC TTAAC GTCCCCGTTTTTA TTATTAGTATTCGAA TERM 1760 1325655 - 1325685 + F 93 -12.7 -3.82084 | opp_overlap 1325655 1325661, overlap 1325661 GATAATTGTTAAAAA CAAAAACGGGGAC TTAAC GTCCCCGTTTTTA TTATTAGTATTCGAA TERM 1761 1325679 - 1325661 - f 100 -11.7 -5.61881 | opp_overlap 1325661 1325655, overlap 1325655 TGTTAAAAACAAAAA CGGGGAC TTAAC GTCCCCG TTTTTATTATTAGTA TERM 1762 1325661 - 1325679 + F 100 -11.7 -5.31855 | opp_overlap 1325655 1325661, overlap 1325655 TGTTAAAAACAAAAA CGGGGAC TTAAC GTCCCCG TTTTTATTATTAGTA STM1239 1326083 - 1327207 + | putative cytoplasmic protein TERM 1763 1327273 - 1327283 + T 82 -6.8 -4.91194 | TACTTCTTGAGGTAG GCAG TAA CTGC TTTTATATTTATTAT envF 1328977 - 1328189 - | putative envelope lipoprotein TERM 1764 1328953 - 1328967 + g 72 -3.6 -4.75472 | opp_overlap 1328962 GAAGTAAGAGATTTT TATATG TAA CATGTA TTTTATTCATGTGAA TERM 1765 1329032 - 1329007 - R 77 -9.1 -3.87627 | opp_overlap 1329011, overlap 1329005 TTTTTATATAAAATA GATAGTCTTGA CTGG TCGAGACTATC CTGGAAACATAGTAA TERM 1766 1329411 - 1329428 + r 95 -12.7 -4.18197 | opp_overlap 1329411 1329413 TTATATCGTCACAGA CAGCGCC TCAG GGCGCTG TTTTCGATCGGACAT TERM 1767 1329428 - 1329411 - R 79 -12.7 -2.89191 | opp_overlap 1329411, overlap 1329413 TTATATCGTCACAGA CAGCGCC TCAG GGCGCTG TTTTCGATCGGACAT TERM 1768 1329426 - 1329413 - R 70 -9.5 -2.99649 | opp_overlap 1329411, overlap 1329411 ATATCGTCACAGACA GCGCC TCAG GGCGC TGTTTTCGATCGGAC msgA 1329705 - 1329466 - | macrophage survival protein TERM 1769 1329872 - 1329837 - R 73 -10.5 -2.94329 | opp_overlap 1329836, overlap 1329836 CACGTGGAAGTAAAG GTCGCTAACCTGTTG TCGTGT CAAGAGGTTAGCGGC ACTCTCTTCACAGCG envE 1330417 - 1329896 - | putative envelope protein STM1243 1331044 - 1330832 - | cold shock-like protein pagD 1331439 - 1331176 - | virulence protein PAGD precursor TERM 1770 1332557 - 1332567 + G 75 -4 -4.93365 | GGGCCAGCCTATCGA TTGT CTG ACAA TTTTTCGTTATACGC TERM 1771 1332673 - 1332660 - g 73 -5.3 -4.63218 | CTTTTTCTAACAAAA TTTCC TCAA GGAAA ACGGGATTTGCCTGG pagC 1332251 - 1332808 + | virulence membrane protein PAGC precursor TERM 1772 1332847 - 1332818 - T 100 -14.3 -3.68359 | overlap 1332812 1332822 TTCTGAAAAGCATAA GCTATGCGGAAGG TTCG CCTTCCGCACCGC CAGTCAATAAAACAG TERM 1773 1332843 - 1332822 - T 86 -14.5 -2.65876 | overlap 1332812 1332818 GAAAAGCATAAGCTA TGCGGAAGG TTCG CCTTCCGCA CCGCCAGTCAATAAA TERM 1774 1333045 - 1333025 - T 72 -5.4 -4.47217 | AAGCAGGAAGGAAAA TCTGGTGT AAATA ACGCCAGA TCTCACAAGATTCAC TERM 1775 1333775 - 1333743 - T 82 -13.4 -3.05384 | opp_overlap 1333770 GGCCTGGGGATTTAA CCGCGCCAGAGCGT ATGCA AGACCCTGGCGCGG TTGGCCGGTGATCGT TERM 1776 1334014 - 1334034 + T 87 -9.7 -4.21319 | opp_overlap 1334014 AGGTTGAAGTGGAAA TGCCTGATG AGT CTTCAGGCA TTTCTTAAGGTTAGT TERM 1777 1334034 - 1334014 - T 79 -9.7 -3.66356 | opp_overlap 1334014 AGGTTGAAGTGGAAA TGCCTGATG AGT CTTCAGGCA TTTCTTAAGGTTAGT pliC 1334389 - 1334045 - | lysozyme inhibitor TERM 1778 1334932 - 1334958 + H 70 -9.3 -3.41125 | overlap 1334933 GTCATATCTTCAGGT ATGGCGCCCGG AGCCG CCGGGCGCAAA TTGTAGGTGTATAAA TERM 1779 1334933 - 1334957 + H 78 -12.8 -2.64354 | overlap 1334932 TCATATCTTCAGGTA TGGCGCCCGG AGCCG CCGGGCGCAA ATTGTAGGTGTATAA TERM 1780 1335064 - 1335089 + H 76 -4.8 -4.73613 | overlap 1335066 TGAATAAGCCAGTTT TTTGTTTCAG CGGTGA CTGAAACATA TTTTGTTCCTGGTGG TERM 1781 1335066 - 1335087 + H 71 -7.4 -3.98016 | overlap 1335064 AATAAGCCAGTTTTT TGTTTCAG CGGTGA CTGAAACA TATTTTGTTCCTGGT TERM 1782 1335098 - 1335116 + G 72 -11 -3.14132 | AAACATATTTTGTTC CTGGTGGT CTT ACCGCCAG TTGCTGAAAAAGACA TERM 1783 1335229 - 1335212 - g 77 -8.3 -4.07885 | opp_overlap 1335212 1335214, overlap 1335213 TATTTCCTCCCAAAA GGCCGCC CGAA GGCGGCG CTGGGTTTGATAATG TERM 1784 1335228 - 1335213 - g 76 -11.8 -3.04517 | opp_overlap 1335212 1335214, overlap 1335212 ATTTCCTCCCAAAAG GCCGCC CGAA GGCGGC GCTGGGTTTGATAAT STM1250 1335092 - 1335364 + | putative cytoplasmic protein STM1251 1335516 - 1335983 + | putative molecular chaperone TERM 1785 1335990 - 1336021 + F 93 -16 -2.87211 | opp_overlap 1335985 1335997, overlap 1335993 AAATCATAATCGCGT TAATGGAGGCCCGT TTAG ACGGGCCTTCATTG TCTGTAGCGAAAAGT TERM 1786 1335993 - 1336018 + F 100 -15.5 -3.58726 | opp_overlap 1335985 1335997, overlap 1335990 TCATAATCGCGTTAA TGGAGGCCCGT TTAG ACGGGCCTTCA TTGTCTGTAGCGAAA TERM 1787 1336014 - 1335997 - f 78 -12.7 -2.52795 | opp_overlap 1335993 1335990, overlap 1335985 AATCGCGTTAATGGA GGCCCGT TTAG ACGGGCC TTCATTGTCTGTAGC TERM 1788 1336547 - 1336561 + G 74 -7.8 -4.18506 | CGCGAGGGGGAAGCG CACTGG AAT CCGGTG TTATTTTACCCGTCG STM1252 1336322 - 1337365 + | putative cytoplasmic protein TERM 1789 1337393 - 1337366 - T 77 -10.6 -3.41126 | overlap 1337367 TTACAAACGGTATAA GGCGCTATCAGT CGAA ACCGATAGCGCT GGAATAATAATGCCT TERM 1790 1337392 - 1337367 - T 83 -14.1 -2.64194 | overlap 1337366 TACAAACGGTATAAG GCGCTATCAGT CGAA ACCGATAGCGC TGGAATAATAATGCC TERM 1791 1337440 - 1337404 - T 80 -10.1 -3.9461 | gap 1, opp_overlap 1337410, overlap 1337405 GCGCTGGAATAATAA TGCCTTGCCCGGCGTG CTCTCT CACGCCGGG-ATGGCC GAAATAGTCATGATT TERM 1792 1337439 - 1337405 - T 85 -13.6 -2.96444 | gap 1, opp_overlap 1337410, overlap 1337404 CGCTGGAATAATAAT GCCTTGCCCGGCGTG CTCTCT CACGCCGGG-ATGGC CGAAATAGTCATGAT STM1253 1337978 - 1337448 - | putative inner membrane protein TERM 1793 1338094 - 1338123 + r 76 -8.5 -4.05607 | opp_overlap 1338100, overlap 1338096 1338100 GCACGTAAAATGGGA TAAAAAGCCGGCG GCAT CGCCGGCTTACTG TTGTTATTGTCCTCT TERM 1794 1338096 - 1338121 + r 72 -8.9 -3.60967 | opp_overlap 1338100, overlap 1338094 1338100 ACGTAAAATGGGATA AAAAGCCGGCG GCAT CGCCGGCTTAC TGTTGTTATTGTCCT TERM 1795 1338100 - 1338117 + r 93 -14.1 -3.50302 | opp_overlap 1338100, overlap 1338096 1338094 AAAATGGGATAAAAA GCCGGCG GCAT CGCCGGC TTACTGTTGTTATTG TERM 1796 1338117 - 1338100 - R 100 -14.1 -4.90296 | opp_overlap 1338100 1338096 1338094 AAAATGGGATAAAAA GCCGGCG GCAT CGCCGGC TTACTGTTGTTATTG STM1254 1338441 - 1338127 - | putative outer membrane lipoprotein TERM 1797 1338501 - 1338472 - H 71 -3.5 -4.76274 | opp_overlap 1338473 1338476, overlap 1338473 1338476 TAAATTAATAGAAAA CTTACCGTCCGAA AATG TCCGGACAGTCAT TTAAAAAGTGGTGTA TERM 1798 1339694 - 1339679 - g 79 -3.2 -5.1861 | overlap 1339680 GTTATGATGAAAAAA CGTTCG CCCG CGAACC GATAGGCGCCGGTCC STM1255 1339123 - 1340757 + | putative ABC transporter periplasmic binding protein TERM 1799 1340797 - 1340826 + G 73 -6.3 -4.48175 | overlap 1340801 TGCGGCTGATTATTC TGTTGGTGCTGGT GGCT GCCGGCACCTTCA TTTTGCTTAGCTTTT TERM 1800 1340801 - 1340822 + G 74 -10.1 -3.75718 | overlap 1340797 GCTGATTATTCTGTT GGTGCTGGT GGCT GCCGGCACC TTCATTTTGCTTAGC STM1256 1340757 - 1341731 + | putative ABC transporter protein TERM 1801 1341944 - 1341977 + G 75 -13.1 -2.52516 | gap 1, opp_overlap 1341942, overlap 1341951 CCAGTTTACAAATTG GCGTTGGCGCCGC-GC TGT GCAGCGGCGTTATCGC GTTAGTGATGGCGGC TERM 1802 1341951 - 1341970 + G 75 -11.4 -3.37464 | gap 1, opp_overlap 1341942, overlap 1341944 ACAAATTGGCGTTGG CGCCGC-GC TGT GCAGCGGCG TTATCGCGTTAGTGA STM1257 1341721 - 1342533 + | putative ABC transporter protein STM1258 1342527 - 1343324 + | putative ABC-type transport system ATPase component TERM 1803 1343719 - 1343739 + G 71 -4.6 -4.5442 | TATTGCGATACTGCG CGCGCTTG ACCCA CGAACGCG TTTTCTGATTGCCGA STM1259 1343318 - 1343908 + | putative ABC-type transport system ATPase component TERM 1804 1343949 - 1343974 + T 83 -13.3 -3.29043 | opp_overlap 1343951, overlap 1343937 1343951 GTGTCGCCGTTAACG CACCGGGAACC CATG GGTTCCCGGTA TTGTCGGCAGAGATT TERM 1805 1343951 - 1343972 + T 100 -15.9 -3.21276 | opp_overlap 1343951, overlap 1343949 1343937 GTCGCCGTTAACGCA CCGGGAACC CATG GGTTCCCGG TATTGTCGGCAGAGA TERM 1806 1343972 - 1343951 - T 90 -15.9 -2.52464 | opp_overlap 1343951 1343949 1343937 GTCGCCGTTAACGCA CCGGGAACC CATG GGTTCCCGG TATTGTCGGCAGAGA STM1260 1345123 - 1343990 - | putative inner membrane protein TERM 1807 1345264 - 1345243 - H 83 -10.1 -4.02953 | opp_overlap 1345241, overlap 1345241 AAAGTATGAAAAAGA GGGGTAGCC GTTT GGCTATCCC GGCGTTTCTGTGCAG STM1261 1345317 - 1345643 + | putative cytoplasmic protein TERM 1808 1345762 - 1345744 - f 100 -11.7 -5.21709 | opp_overlap 1345750 1345754 GTTGATATCAAAAAA GGCCACC TGCGC GGTGGCC GCTGAGTTTCTGTTG TERM 1809 1345826 - 1345806 - f 87 -11.3 -4.00486 | opp_overlap 1345800 GTTATAATATAACAA TCATCTTTC TAA GAAAGATGA GGGTAACGTTTTGGT STM1263 1345840 - 1346487 + | hypothetical protein TERM 1810 1346527 - 1346508 - f 95 -12.2 -4.19506 | opp_overlap 1346508 ATTGCAATGTTAAAA GCTCGCTA TGAA TAGCGAGC TTTTTTTCTGCCGTT TERM 1811 1346508 - 1346527 + F 100 -12.2 -5.63504 | opp_overlap 1346508 ATTGCAATGTTAAAA GCTCGCTA TGAA TAGCGAGC TTTTTTTCTGCCGTT aadA 1346596 - 1347384 + | aminoglycoside resistance protein TERM 1812 1347829 - 1347846 + G 77 -4.1 -5.02074 | CGCGAATTACTGATT TTGGCCG CTGC TGGTCAA TTTTTTCCCAGGTCA STM1265 1347529 - 1348122 + | putative response regulator TERM 1813 1348265 - 1348306 + G 80 -4.3 -5.10461 | overlap 1348268 CAGGTCCTGGGAACG CTATGGCCTGCTTCAACCT ACCA AAGATGAAGCTGGCAATCG TTTTTATTGCATAGA STM1266 1348191 - 1349039 + | putative transcriptional regulator TERM 1814 1349086 - 1349061 - T 79 -11.1 -3.41693 | opp_overlap 1349061 1349064, overlap 1349064 TGCATTATTAACGAA CAGGGGAGGAG TAAA CCCCTCCCTTG TTTATACTCTTCATA TERM 1815 1349061 - 1349086 + T 89 -11.1 -4.07455 | opp_overlap 1349061 1349064, overlap 1349064 TGCATTATTAACGAA CAGGGGAGGAG TAAA CCCCTCCCTTG TTTATACTCTTCATA TERM 1816 1349083 - 1349064 - T 73 -11.4 -2.56164 | opp_overlap 1349061 1349064, overlap 1349061 ATTATTAACGAACAG GGGAGGAG TAAA CCCCTCCC TTGTTTATACTCTTC TERM 1817 1349064 - 1349083 + T 79 -9.2 -4.14977 | opp_overlap 1349064 1349061, overlap 1349061 ATTATTAACGAACAG GGGAGGAG TAAA CCCCTCCC TTGTTTATACTCTTC TERM 1818 1349183 - 1349205 + T 73 -11.4 -2.71144 | opp_overlap 1349187, overlap 1349187 GTCGCACGCGACGTT CAAATCTGCT CCC GGCAGATTTG TCGTTCACCCCAGTC STM1267 1349542 - 1349294 - | putative cytoplasmic protein STM1268 1349770 - 1349621 - | putative cytoplasmic protein TERM 1819 1349680 - 1349647 - G 93 -4.7 -5.4756 | opp_overlap 1349657 1349667, overlap 1349657 AACTGTAATAAAAAA TCATAAAAACGTGAT GCGC ATCACATTTGTGTGA TTTGTTGTATATTTT TERM 1820 1349667 - 1349680 + g 70 -5.3 -4.5002 | opp_overlap 1349657 1349647, overlap 1349657 AAAACGTGATGCGCA TCACA TTTG TGTGA TTTGTTGTATATTTT TERM 1821 1350278 - 1350320 + G 100 -17 -3.72695 | overlap 1350266 1350274 CCAGCGCTTGATGGT CGGCGCTTTCAGCCACGACG ATA TGGTGTGGCTGAGAGCGCAG TTTAATGCGCCGAAT STM1269 1349853 - 1350398 + | chorismate mutase TERM 1822 1350710 - 1350696 - g 73 -5.6 -4.56597 | overlap 1350677 1350698 TTTTGTGCTTAAAAA CAGCGT GGG ACGCGG GGTTAAAGGAGGATA yeaS 1350595 - 1351233 + | leucine export protein LeuE TERM 1823 1351240 - 1351263 + F 77 -10.2 -3.35344 | opp_overlap 1351237, overlap 1351241 1351243 CAGTCTTAACCACCT GGACCCGTCG TCAA CGGCGGGTCA TTGCTCTCCTTTCGG TERM 1824 1351241 - 1351262 + F 83 -13.7 -2.60725 | opp_overlap 1351237, overlap 1351240 1351243 AGTCTTAACCACCTG GACCCGTCG TCAA CGGCGGGTC ATTGCTCTCCTTTCG TERM 1825 1351243 - 1351260 + F 72 -10.5 -2.83634 | opp_overlap 1351237, overlap 1351241 1351240 TCTTAACCACCTGGA CCCGTCG TCAA CGGCGGG TCATTGCTCTCCTTT yeaR 1351406 - 1351768 + | putative cytoplasmic protein yoaG 1351771 - 1351953 + | putative cytoplasmic protein TERM 1826 1352030 - 1352002 - f 76 -11.7 -2.75769 | opp_overlap 1352002, overlap 1352001 TTTTTAAATCAGAAG CCGCATCGCGC GTCGCCA GCGTGATGCGG TTTTTGCGTATTGAA TERM 1827 1352002 - 1352030 + F 100 -13.9 -4.74706 | opp_overlap 1352002 1352001 TTTTTAAATCAGAAG CCGCATCGCGC GTCGCCA GCGTGATGCGG TTTTTGCGTATTGAA STM1273 1352183 - 1352824 + | putative nitric oxide reductase TERM 1828 1352903 - 1352882 - f 100 -12.3 -5.52384 | gap 1 CGGTTAGCAAAAAAA GCCCGCACTC GGT GAG-GCGGGC AAATAATACTGGAAG STM1273.1n 1352946 - 1353131 + | hypothetical protein yeaQ 1353139 - 1353387 + | hypothetical protein TERM 1829 1353436 - 1353406 - f 87 -14.3 -2.90219 | opp_overlap 1353409 1353413, overlap 1353409 1353413 CAGAACTTTCAGAGA TAATAAAGGCTAC GACAG GTAGCCTTTATTA TTCAAAATGAATTTA TERM 1830 1353433 - 1353409 - f 86 -11.6 -3.5947 | opp_overlap 1353409 1353413, overlap 1353406 1353413 AACTTTCAGAGATAA TAAAGGCTAC GACAG GTAGCCTTTA TTATTCAAAATGAAT TERM 1831 1353409 - 1353433 + F 86 -11.6 -3.63694 | opp_overlap 1353409 1353406 1353413, overlap 1353413 AACTTTCAGAGATAA TAAAGGCTAC GACAG GTAGCCTTTA TTATTCAAAATGAAT TERM 1832 1353429 - 1353413 - f 79 -8 -4.42974 | opp_overlap 1353409 1353413, overlap 1353409 1353406 TTCAGAGATAATAAA GGCTAC GACAG GTAGCC TTTATTATTCAAAAT TERM 1833 1353413 - 1353429 + F 79 -8 -4.45068 | opp_overlap 1353413 1353409 1353406, overlap 1353409 TTCAGAGATAATAAA GGCTAC GACAG GTAGCC TTTATTATTCAAAAT yaoF 1353820 - 1354071 + | putative hemolysin TERM 1834 1354314 - 1354302 - g 80 -10.5 -3.91716 | opp_overlap 1354304 TTACTGCCGAAAGAA GCGCC TCG GGCGC TGTGGCTGGTTACGG STM1276 1354140 - 1354451 + | putative periplasmic protein yeaO 1354784 - 1354437 - | putative cytoplasmic protein yeaN 1356087 - 1354903 - | putative amino acid/amine transport protein TERM 1835 1356944 - 1356923 - g 100 -11.5 -5.03715 | opp_overlap 1356921 ACCATGTTTAAAAAA GGCCTGGGG CAGA CGCCAGGCC AGTATCTGACGGGCG yeaM 1356188 - 1356982 + | putative regulatory protein yeaL 1357407 - 1357003 - | putative inner membrane protein TERM 1836 1357052 - 1357084 + g 81 -12 -3.60296 | gap 1, opp_overlap 1357030 ACGCCAAGTACCGTA CCGACCAGCAGCCCG GCGA CGAGCTGC-GGTTGG TTTCCCATCAGCGTA STM1281 1357613 - 1357720 + | putative inner membrane protein yeaK 1358235 - 1357717 - | putative cytoplasmic protein yeaJ 1359778 - 1358285 - | putative methyl-accepting chemotaxis protein TERM 1837 1359135 - 1359117 - G 76 -3.1 -5.00884 | opp_overlap 1359117 ACTGGCGTTAAAAAA CTCATGA CGTTT TCCTGAG TAATATCATCCATGT TERM 1838 1360382 - 1360415 + r 100 -17.7 -2.85508 | opp_overlap 1360386, overlap 1360386 TTGCCTTGTTAGTGA TAAATCAGCCCGTGA CTCA TTACGGGCTGATTTA TGGTTATGCACTTTG TERM 1839 1360411 - 1360386 - R 95 -11.9 -3.91897 | opp_overlap 1360382 1360386 CTTGTTAGTGATAAA TCAGCCCGTGA CTCA TTACGGGCTGA TTTATGGTTATGCAC TERM 1840 1360386 - 1360411 + r 100 -14.1 -4.1021 | opp_overlap 1360386, overlap 1360382 CTTGTTAGTGATAAA TCAGCCCGTGA CTCA TTACGGGCTGA TTTATGGTTATGCAC yeaH 1361705 - 1360419 - | hypothetical protein TERM 1841 1360796 - 1360785 - G 71 -4.4 -4.63218 | CTCTTGCGAATAAAA GAAC TCAT GTTC GTCCACTTCCTTCGC TERM 1842 1360955 - 1360979 + g 77 -4.2 -4.88129 | gap 1, opp_overlap 1360927 1360955, overlap 1360957 TCAGACAGAACATCA CCGCCTG-GCT GGAG GGCTCAGGCCG TTTTTCATAATTTTT TERM 1843 1361271 - 1361283 + g 76 -3.3 -5.10208 | TTTATACTCGTTAAG CTGGC GAT GCTGG TTTTTCTTCAGATTA yeaG 1363762 - 1361828 - | putative serine protein kinase TERM 1844 1362799 - 1362812 + g 74 -4.5 -4.72127 | opp_overlap 1362795, overlap 1362795 CAATATAGACACGGT CGAGG AACG CTTCG TTATTTTTATTGTTA mipA 1364189 - 1364935 + | MltA-interacting protein A TERM 1845 1364993 - 1364958 - f 72 -4.7 -4.57341 | gap 1, opp_overlap 1364962 1364964 1364968, overlap 1364959 1364961 1364962 1364968 AATTTGCCGGAAAAA CCACGACAAAGCCTGC GTTAT GCGGGCTTTGT-GCTG TCTGAAACGCGAACA TERM 1846 1364964 - 1364988 + F 81 -12.9 -2.69151 | opp_overlap 1364961 1364962 1364958 1364959 1364968, overlap 1364962 1364968 CCGGAAAAACCACGA CAAAGCCTGCG TTA TGCGGGCTTTG TGCTGTCTGAAACGC TERM 1847 1364968 - 1364984 + F 73 -7.9 -4.04318 | opp_overlap 1364968 1364961 1364962 1364958 1364959, overlap 1364964 1364962 AAAAACCACGACAAA GCCTGCG TTA TGCGGGC TTTGTGCTGTCTGAA TERM 1848 1365419 - 1365432 + G 74 -3.1 -4.85782 | gap 1 GCAGGGGGGAGAGCC GA-CGC TAT GCGGTC TTTCTTTTTACCAAA TERM 1849 1365805 - 1365826 + G 74 -8 -3.97689 | gap 1, overlap 1365811 TTCCCATTGTTGAGC CGCTCGCGC AAAAA GCGC-AGCG TTCTTTGACGTTATC STM1287 1365225 - 1366421 + | arylsulfatase regulator STM1288 1366518 - 1367375 + | putative aldehyde reductase yeaD 1368358 - 1367474 - | aldose 1-epimerase TERM 1850 1368667 - 1368650 - R 100 -11.3 -5.95166 | opp_overlap 1368652 TTTAAGCAAAAAAAA GAGCGAC CTGA GTCGCTC TTACCAATGACTGTG gapA 1369688 - 1368693 - | glyceraldehyde-3-phosphate dehydrogenase TERM 1851 1369760 - 1369744 - H 72 -2.9 -5.09245 | GTAAAATTACAAAAA CCTTACG CAG CGTCAAG CGGAATCGTGTCAAT TERM 1852 1370263 - 1370277 + G 72 -2.1 -4.91511 | CAGCGAAGAGGCGAT TCGTT ACATA GACGA TTTTTCTCATGGAAT TERM 1853 1370392 - 1370404 + G 71 -6.2 -4.36914 | opp_overlap 1370367, overlap 1370390 CTATTGCGTTAACTC GGCC TCGCT GGCC TTTTCTGACGAGAAA yeaA 1370000 - 1370443 + | methionine sulfoxide reductase B yeaC 1370485 - 1370763 + | putative cytoplasmic protein TERM 1854 1370785 - 1370798 + T 80 -9.5 -3.91084 | opp_overlap 1370778 1370781 1370780 CCGGATAAGAGGTAG CCGCC ATCC GGCGG TTTCATTGCCAATGC TERM 1855 1370952 - 1370969 + T 70 -2.5 -4.91573 | TATTCCCAGAACATT GCGCCAG CCAG CCCGCGC TTTTTAATCTGTTTT pncA 1371771 - 1371115 - | nicotinamidase/pyrazinamidase ansA 1372814 - 1371798 - | cytoplasmic asparaginase I TERM 1856 1372095 - 1372109 + g 70 -7 -4.09685 | opp_overlap 1372095 1372093 GCCTACGCCATAAGA GCGCAG AAT CAGCGC TTTTACCGGCTGACG sppA 1374766 - 1372910 - | protease 4 TERM 1857 1375196 - 1375174 - g 83 -7.6 -4.67011 | opp_overlap 1375173 1375191 AAGGCGATCGAAAAA GCGCGTAATG CGC CGTTTCGCGC ACCGCTGATTATTAC ydjA 1374940 - 1375491 + | hypothetical protein TERM 1858 1375545 - 1375507 - f 70 -5.3 -4.42386 | gap 1, opp_overlap 1375504 CGCTGAGGGATAAAA CTGTCTGGATT-CTGAGC AAAG GCGCGGTAATTCAGACAG TGATACTTACCACAT selD 1375609 - 1376652 + | selenophosphate synthetase TERM 1859 1377802 - 1377788 - g 84 -2.8 -5.31275 | opp_overlap 1377793, overlap 1377790 TGGGATGACAAAAAA GTGG ATGCGCA CCAC GCGATTATCCCGACG TERM 1860 1378045 - 1378033 - g 74 -6.9 -4.30576 | opp_overlap 1378036 GCGCGACGAGGAAAA CGACG GTA CGCCG CTGCCGGTTGTCGCC TERM 1861 1378561 - 1378539 - g 74 -6.9 -4.24787 | gap 1, overlap 1378556 GAGACAAGAAAAAGA GCGCGC-CGC GTAA GCGAGCGGGC AAAAAAAGCCCGCCT TERM 1862 1378591 - 1378569 - g 100 -7.6 -5.41143 | overlap 1378556 1378589 GAGCGGGCAAAAAAA GCCCGCCTGC TGC GGAGACAGGC CGTCAGACCGAATAA topB 1376657 - 1378606 + | DNA topoisomerase III TERM 1863 1378666 - 1378641 - T 76 -8.9 -3.75169 | opp_overlap 1378642, overlap 1378642 1378644 GACGACGGGATTAAA TGACGCCCTGC GCCA GCATGGCGTCG GCGACTTTCACGAAA TERM 1864 1378665 - 1378642 - T 79 -12.4 -2.8478 | opp_overlap 1378642, overlap 1378641 1378644 ACGACGGGATTAAAT GACGCCCTGC GCCA GCATGGCGTC GGCGACTTTCACGAA gdhA 1379979 - 1378636 - | glutamate dehydrogenase TERM 1865 1378852 - 1378869 + g 71 -9.8 -3.53012 | CCCCGATGTCGCCAC GCCGCC CGCGTT GGCGGC TTTACCCGGCGCAAA TERM 1866 1379740 - 1379764 + g 77 -4.9 -4.91109 | overlap 1379736 1379735 GTTGAACTGCACGCG CCAGGCGCG ATTTACC TGCACCTGG TTTTTGTCGTCCAGC TERM 1867 1379904 - 1379932 + g 73 -6 -4.44915 | gap 1 CTTCACGGACGGCTT GCGCGAACTCG GTTTGATG CGGGT-CGCGC TTTTGTACATGGTTG STM1300 1380218 - 1380493 + | putative periplasmic protein STM1301 1380869 - 1380453 - | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase xthA 1381748 - 1380942 - | exonuclease III TERM 1868 1382235 - 1382258 + G 74 -4.4 -4.75472 | CTTTGATGAATGGAT GGTGCCGGTA TACG TTCCCGCGCC TTTTATTCCTGTACG argD 1382194 - 1383420 + | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 1869 1383973 - 1383985 + G 79 -3.3 -5.26316 | TTTTTTCTATGGATT TCAGC CGG GCGGA TTTTTTATGCGGTAC astA 1383411 - 1384445 + | arginine succinyltransferase astD 1384442 - 1385920 + | succinylglutamic semialdehyde dehydrogenase TERM 1870 1386546 - 1386586 + G 78 -11.7 -3.16881 | opp_overlap 1386529 ACCCGCTCGTTATCC GGCGCGCCAGAGCCGCG AAGCCAG CGAGGCCGTGGCGCGTC TTAATCAGGTGAATC astB 1385917 - 1387260 + | succinylarginine dihydrolase astE 1387253 - 1388221 + | succinylglutamate desuccinylase spy 1388557 - 1389042 + | periplasmic protein TERM 1871 1389062 - 1389110 + T 100 -11.7 -5.0065 | opp_overlap 1389060 1389062 CCGCATAATTTAAGA CCGCCGGTCTTGTCGACAACA CAATCGT TGAGGTGGACAGGATCGGCGG TTTTCTTTATGACTG STM1309 1390025 - 1389117 - | nucleotide excision repair endonuclease nadE 1390946 - 1390119 - | NAD synthetase osmE 1391165 - 1391506 + | DNA-binding transcriptional activator OsmE TERM 1872 1391553 - 1391538 - f 74 -8.2 -3.95817 | opp_overlap 1391538 GAACATTCAAGGAAA CCGGCC TGCG AGCCGG TTTTTTTGTGCCTGC TERM 1873 1391538 - 1391553 + F 100 -7.5 -5.64274 | opp_overlap 1391538 GAACATTCAAGGAAA CCGGC CTGCGA GCCGG TTTTTTTGTGCCTGC celA 1391807 - 1392127 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB TERM 1874 1392170 - 1392192 + F 72 -9.2 -3.64192 | opp_overlap 1392172, overlap 1392172 GTTATTTCATACACT AACCGCAATA TTT TATTGCGGTA TTTAAGGGTATTTTT TERM 1875 1392172 - 1392190 + F 82 -11.8 -3.38603 | opp_overlap 1392172, overlap 1392170 TATTTCATACACTAA CCGCAATA TTT TATTGCGG TATTTAAGGGTATTT TERM 1876 1392190 - 1392172 - f 82 -11.8 -3.32498 | opp_overlap 1392170 1392172 TATTTCATACACTAA CCGCAATA TTT TATTGCGG TATTTAAGGGTATTT TERM 1877 1392490 - 1392506 + G 85 -4.3 -5.252 | GCACATTGGGCATTA TGTCGCT CAT GGCGCCA TTTTTTATCGGCATG celB 1392210 - 1393568 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC TERM 1878 1393604 - 1393570 - f 95 -12.9 -3.72363 | gap 1, overlap 1393571 CACTGAAATTCTAAA CTCCGCGCCGGCATGG GATG CCATGCCGG-GCTGAA TCAGAGGAAAGACTA TERM 1879 1393603 - 1393571 - f 84 -14.2 -2.82936 | gap 1, overlap 1393570 ACTGAAATTCTAAAC TCCGCGCCGGCATGG GATG CCATGCCGG-GCTGA ATCAGAGGAAAGACT celC 1393619 - 1393966 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA celD 1393977 - 1394819 + | DNA-binding transcriptional regulator ChbR TERM 1880 1394932 - 1394916 - f 70 -9.5 -3.10513 | ATAGCGTAATACATA TCAGTGT TAT ACACTGA AGGGAGATATTATGA celF 1394944 - 1396299 + | phospho-beta-glucosidase/cellobiose-6-phosphate hydrolase celG 1396312 - 1397070 + | hypothetical protein TERM 1881 1397081 - 1397102 + T 100 -15.9 -5.34055 | overlap 1397083 1397087 TTTAGCTCCTGAGTT TGCGGCGCA AGAA TGCGCCGCA TTTTTTGCTGTTTAT katE 1399366 - 1397114 - | hydroperoxidase II TERM 1882 1398431 - 1398448 + g 74 -3.3 -4.88736 | opp_overlap 1398430, overlap 1398430 1398433 CCGGCGGTGAAAATC CGGATCG CGAC CGGTCAG TTTTTGTGACTCATC cedA 1399731 - 1399973 + | cell division modulator TERM 1883 1400011 - 1399981 - T 100 -9.8 -5.5112 | opp_overlap 1399986, overlap 1399986 CTGACTAAGAAAAAA CAAAACGCCGGT ACTGGAG ACCGGCGTTTTT AGTGACAGACATTTT TERM 1884 1400006 - 1399986 - T 100 -9.7 -5.55001 | opp_overlap 1399986, overlap 1399981 TAAGAAAAAACAAAA CGCCGGT ACTGGAG ACCGGCG TTTTTAGTGACAGAC TERM 1885 1399986 - 1400006 + T 93 -9.7 -4.72272 | opp_overlap 1399986 1399981 TAAGAAAAAACAAAA CGCCGGT ACTGGAG ACCGGCG TTTTTAGTGACAGAC ydjN 1401466 - 1400075 - | kinase/transporter-like protein TERM 1886 1400934 - 1400945 + g 75 -5.8 -4.65895 | TTTGCGCCAGTCAGA TCCG CAAA CGGA TTTTTCGGTACAAAA ydjM 1402190 - 1401603 - | hypothetical protein TERM 1887 1401982 - 1402001 + g 70 -9.2 -3.66095 | opp_overlap 1401972 GTAAACCCCCGGTGA CCGAACGC GCGG GCGATCGG TTTCGATACCCATTT TERM 1888 1402181 - 1402169 - G 86 -4.1 -5.36441 | TGGCTATAGAAAAAA GAAGA TGT CCTTC CGCCGTCATGATAAA yniC 1403008 - 1402340 - | 2-deoxyglucose-6-phosphatase TERM 1889 1402460 - 1402445 - G 72 -11.8 -2.64099 | opp_overlap 1402443 1402445, overlap 1402444 TGCTGGCACCACAAT GGCGCG CATT CGCGCC GCCTTTGCCGCGATT TERM 1890 1402566 - 1402579 + g 70 -3.1 -4.82901 | ACCTGCGGGTGCGGT TTGCT GTAG GGCAA TTTTTCTGCAGAAGC yniB 1403157 - 1403693 + | putative regulatory protein TERM 1891 1403725 - 1403703 - T 100 -12.1 -4.81851 | ATGTAAACTGAAAAA TGCCGGATA GCCCG TATCCGGCA TGGGCTGTACCTATA STM1324 1404596 - 1403736 - | putative cytoplasmic protein ydiZ 1404993 - 1404703 - | putative cytoplasmic protein TERM 1892 1404767 - 1404795 + g 86 -10.3 -4.10552 | opp_overlap 1404766 1404792 1404793 ACATCCTTATCTAAC GCGCTTTTCGC AAGTCCG GCGACAAGCGC TTTGATTTCATCAGC TERM 1893 1404903 - 1404893 - G 78 -2.4 -5.16237 | AATGTCAGCAAAAAA CCGC TAC GCGT CAGATGGTTATTGAG TERM 1894 1405044 - 1405029 - R 78 -11.8 -3.01791 | ACTGTGTTTTTAACA GCGGCG GATG CGCCGC CCGTTAACCGATTTT TERM 1895 1405060 - 1405089 + r 82 -11.5 -3.61398 | gap 1, opp_overlap 1405056, overlap 1405061 CCGTTAACCGATTTT CCGTTATCCCCCTC GGC GAGGGGGA-AACGA TTATTGCGCGGAAAG TERM 1896 1405061 - 1405088 + r 93 -15 -2.76696 | gap 1, opp_overlap 1405056, overlap 1405060 CGTTAACCGATTTTC CGTTATCCCCCTC GGC GAGGGGGA-AACG ATTATTGCGCGGAAA pfkB 1406022 - 1405090 - | 6-phosphofructokinase 2 TERM 1897 1406267 - 1406283 + H 89 -6.5 -5.32944 | CCTATGAAAGTTTCC GGGACCG TCG TGGTCTC TTTTTTAGTTGTACG TERM 1898 1406444 - 1406434 - g 82 -5.4 -5.03314 | opp_overlap 1406434 1406443 TCCACCGCGAAAAAA CCTT TTG AAGG TAATCTGAATGCGGG ydiY 1406311 - 1407069 + | putative outer membrane protein TERM 1899 1407077 - 1407099 + T 100 -17.8 -3.69395 | opp_overlap 1407072 1407070 1407095 AGATGTAATATTGTA CCGGGTTACG TTA CGTAACCCGG TTATTCCGTGGTGAC STM1328 1408077 - 1407118 - | putative outer membrane protein TERM 1900 1407603 - 1407621 + g 80 -5.2 -4.84761 | overlap 1407605 1407606 AACGGTTTTCAATTT GATCCTGC CAG GCAGGGTA TTTTTCTGCGCCTAT TERM 1901 1407605 - 1407619 + g 71 -7.8 -4.04397 | overlap 1407603 1407606 CGGTTTTCAATTTGA TCCTGC CAG GCAGGG TATTTTTCTGCGCCT TERM 1902 1408158 - 1408123 - H 72 -10.6 -2.92475 | gap 1, opp_overlap 1408128, overlap 1408126 1408129 CTTATTTTTACAAAG TAATAAGCACAGCAGCA TGA TGC-GCAGTGCCTATTA AACCTTTAAATATAA TERM 1903 1408152 - 1408129 - H 71 -7.4 -3.93401 | gap 1, opp_overlap 1408128, overlap 1408126 1408123 TTTACAAAGTAATAA GCACAGCAGCA TGA TGC-GCAGTGC CTATTAAACCTTTAA STM1329 1408220 - 1408534 + | putative inner membrane protein TERM 1904 1408818 - 1408787 - g 74 -2.8 -4.84761 | opp_overlap 1408808, overlap 1408799 ATAGCGTGACAAAAA CCAGCCAGGCAAGC GGTC GCCCGCGGAACTGG GCGCAGGACCCCGAT STM1330 1408531 - 1409385 + | putative DNA/RNA non-specific endonuclease TERM 1905 1410055 - 1410089 + T 74 -5.6 -4.67968 | opp_overlap 1410064, overlap 1410058 1410059 1410062 TTTACGCTTCAGAGC CAAATAAAACGGCGGC ATT GCCGCCGTATAACTTA TTTATTGTTTCTTAG TERM 1906 1410058 - 1410086 + T 77 -7.3 -4.39859 | opp_overlap 1410064, overlap 1410055 1410059 1410062 ACGCTTCAGAGCCAA ATAAAACGGCGGC ATT GCCGCCGTATAAC TTATTTATTGTTTCT TERM 1907 1410059 - 1410085 + T 74 -10.8 -3.21475 | opp_overlap 1410064, overlap 1410058 1410055 1410062 CGCTTCAGAGCCAAA TAAAACGGCGGC ATT GCCGCCGTATAA CTTATTTATTGTTTC TERM 1908 1410062 - 1410082 + T 79 -12.5 -2.76588 | opp_overlap 1410064, overlap 1410059 1410058 1410055 TTCAGAGCCAAATAA AACGGCGGC ATT GCCGCCGTA TAACTTATTTATTGT TERM 1909 1410080 - 1410064 - T 100 -15.1 -4.92385 | opp_overlap 1410062 1410059 1410058 1410055 CAGAGCCAAATAAAA CGGCGGC ATT GCCGCCG TATAACTTATTTATT rfc 1411310 - 1410087 - | O-antigen polymerase TERM 1910 1412052 - 1412073 + H 72 -10.3 -2.88758 | overlap 1412054 1412067 ACCATCATCATGCCG GACGAAAAT AGCG ATTTTCGTC TGTGTCGAAGGTTGT TERM 1911 1412488 - 1412503 + G 70 -3.2 -4.80882 | overlap 1412490 AAATGGCGATCGGCC CGGTTG TCGA CAACGG TTTTTACTATGACGT TERM 1912 1413131 - 1413121 - g 74 -2.4 -5.00616 | TGCTGTGGGAAAAAA CCGG GCA CTGG GACAACTATAAAGAT thrS 1412202 - 1414130 + | threonyl-tRNA synthetase infC 1414134 - 1414676 + | translation initiation factor IF-3 TERM 1913 1414720 - 1414693 - f 72 -8.4 -3.81146 | opp_overlap 1414693 1414694 1414714, overlap 1414694 GCCTTCAAGTAACAA TTCTGTGAAGCC TTCG GGCTTCACAGGC TTTGTTCGCCTATGT TERM 1914 1414693 - 1414720 + F 90 -10.6 -4.2008 | opp_overlap 1414693 1414694, overlap 1414694 1414714 GCCTTCAAGTAACAA TTCTGTGAAGCC TTCG GGCTTCACAGGC TTTGTTCGCCTATGT TERM 1915 1414719 - 1414694 - f 77 -11.9 -2.88366 | opp_overlap 1414693 1414694 1414714, overlap 1414693 CCTTCAAGTAACAAT TCTGTGAAGCC TTCG GGCTTCACAGG CTTTGTTCGCCTATG TERM 1916 1414694 - 1414719 + F 85 -14.1 -3.11325 | opp_overlap 1414694 1414693, overlap 1414693 1414714 CCTTCAAGTAACAAT TCTGTGAAGCC TTCG GGCTTCACAGG CTTTGTTCGCCTATG rpmI 1414772 - 1414969 + | 50S ribosomal protein L35 rplT 1415020 - 1415376 + | 50S ribosomal protein L20 TERM 1917 1415386 - 1415408 + F 100 -12 -4.99568 | opp_overlap 1415388, overlap 1415388 GCATAAGCCAGTGAA AAGAGGGAGC CTG GCTCCCTCTC TTTTATTTACTGTTC TERM 1918 1415388 - 1415406 + F 100 -14.6 -4.09862 | opp_overlap 1415388, overlap 1415386 ATAAGCCAGTGAAAA GAGGGAGC CTG GCTCCCTC TCTTTTATTTACTGT TERM 1919 1415406 - 1415388 - f 100 -14.6 -4.21676 | opp_overlap 1415386 1415388 ATAAGCCAGTGAAAA GAGGGAGC CTG GCTCCCTC TCTTTTATTTACTGT TERM 1920 1415584 - 1415614 + F 77 -12.1 -2.89564 | gap 1, opp_overlap 1415591, overlap 1415591 AAACGAAAAACAGCG CAAAAAA-GCCTCC TGAT GGAGGCTTTTTTTG TATCTGAAATCGAGA TERM 1921 1415591 - 1415606 + F 100 -10.4 -5.76633 | opp_overlap 1415591, overlap 1415584 AAACAGCGCAAAAAA GCCTCC TGAT GGAGGC TTTTTTTGTATCTGA TERM 1922 1415606 - 1415591 - f 100 -10.4 -5.10077 | opp_overlap 1415584 1415591 AAACAGCGCAAAAAA GCCTCC TGAT GGAGGC TTTTTTTGTATCTGA pheS 1415678 - 1416661 + | phenylalanyl-tRNA synthetase subunit alpha TERM 1923 1417256 - 1417229 - g 83 -9.8 -4.20516 | overlap 1417251 GCGGTACTGAACAAA GCGCCGCTCCAG GAGC CTGAAATGGCGC CGGTTACGGCAACCA pheT 1416677 - 1419064 + | phenylalanyl-tRNA synthetase subunit beta ihfA 1419069 - 1419368 + | integration host factor subunit alpha TERM 1924 1419411 - 1419452 + F 95 -11.7 -3.87815 | opp_overlap 1419413 GTGTATTGCGGCAGA TACGCTGCCATCCCG AAAGTAGATCAG CGGGATGACAGCGTA TTTGTCAGCCTGAAA TERM 1925 1419450 - 1419413 - f 77 -12.1 -2.87564 | opp_overlap 1419411 GTATTGCGGCAGATA CGCTGCCATCCCG AAAGTAGATCAG CGGGATGACAGCG TATTTGTCAGCCTGA TERM 1926 1419509 - 1419483 - f 83 -13.8 -2.58861 | opp_overlap 1419489, overlap 1419489 GATGACCCGTATAAC TAAAAAGGCCGC ATT GCGGCCTTTTTT CTTTCAAGTAAAGGA TERM 1927 1419489 - 1419503 + F 100 -12.8 -5.64421 | opp_overlap 1419489 1419483 CCGTATAACTAAAAA GGCCGC ATT GCGGCC TTTTTTCTTTCAAGT TERM 1928 1419503 - 1419489 - f 100 -12.8 -4.93365 | opp_overlap 1419489, overlap 1419483 CCGTATAACTAAAAA GGCCGC ATT GCGGCC TTTTTTCTTTCAAGT btuC 1419571 - 1420551 + | vtamin B12-transporter permease btuE 1420643 - 1421194 + | putative glutathione peroxidase TERM 1929 1421189 - 1421178 - f 70 -2.2 -5.04325 | TGGAAAGCATAAAAA TCGC GTTG GCAA AATAATGTCTCAATT TERM 1930 1421872 - 1421892 + G 89 -13.3 -3.54424 | ACCCCCTCTTATCTG GCGCAAGCC TAC GGTTTGCGC TTTCGACGACTCGAC btuD 1421194 - 1421943 + | vitamin B12-transporter ATPase nlpC 1422020 - 1422484 + | lipoprotein TERM 1931 1422625 - 1422608 - f 80 -6.9 -4.72986 | overlap 1422609 TACTTTTATTAAAAA CGGGCGT GTTC ACGCCCT GTGAAAAGTACAAGA TERM 1932 1422624 - 1422609 - f 77 -10.4 -3.4331 | overlap 1422608 ACTTTTATTAAAAAC GGGCGT GTTC ACGCCC TGTGAAAAGTACAAG TERM 1933 1422693 - 1422682 - f 71 -7.2 -4.04789 | AGTTAAAAAAAGGAA CCGG TTCA CCGG TAAACAAGAAAAATG ydiV 1422798 - 1423511 + | hypothetical protein TERM 1934 1424268 - 1424302 + G 73 -10.6 -3.35996 | opp_overlap 1424263 1424282, overlap 1424270 TACCGGAAGACTCAT CGCCGAGTGGCAAACC GTC GGTTTTGCGCACGGCG TTATGAATACGGATA TERM 1935 1424478 - 1424464 - g 70 -10 -3.41878 | overlap 1424461 CTGTGGAATTTACAA CGTCTG GCG CAGACG TTAACCCCTTTTATT ydiU 1423573 - 1425015 + | hypothetical protein ydiE 1425241 - 1425050 - | hypothetical protein TERM 1936 1425392 - 1425370 - R 100 -15.6 -4.21631 | opp_overlap 1425367 AACGCATCGAAGAAA CGCCCATCCC GGC AGGATGGGCG AGCTATTAAAAGCGG TERM 1937 1425421 - 1425404 - R 79 -8.3 -4.2828 | opp_overlap 1425413 GGCGAGCTATTAAAA GCGGCTG TCTA CCGCCGC GGCAAGTTTTTCCAA aroH 1426444 - 1425398 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1938 1425618 - 1425628 + g 71 -4.6 -4.62471 | CATACCTCTAACTGG CGGC GAT GCTG TTTTTGACAGTTGCC ydiA 1427433 - 1426600 - | hypothetical protein TERM 1939 1429213 - 1429187 - g 83 -7.2 -4.62336 | ATTTCAGCGTAAAAA GCTCCAGCGTAG ATA CCATGCCAGAGC TACCGCTGAAGGTCA TERM 1940 1429610 - 1429628 + G 74 -7.4 -4.19746 | GCGCGGGTCGTTATG TCGCAGAA AGT TTCCGCGA TTGTTTTGCGCTGGA pps 1427770 - 1430148 + | phosphoenolpyruvate synthase TERM 1941 1430154 - 1430186 + T 72 -10.6 -2.91593 | gap 1, opp_overlap 1430156, overlap 1430153 GAAGAAGTAGTGTAA TAC-GGATGGCGGCG TTAA CGTCGCCATCCGGCA ATTTATACCGCAGTG TERM 1942 1430183 - 1430156 - T 100 -17 -3.08283 | opp_overlap 1430154 1430153 AGAAGTAGTGTAATA CGGATGGCGGCG TTAA CGTCGCCATCCG GCAATTTATACCGCA ydiD 1431829 - 1430189 - | short chain acyl-CoA synthetase TERM 1943 1431876 - 1431906 + r 70 -9.1 -3.35046 | gap 1, opp_overlap 1431884 1431886, overlap 1431874 1431886 ATCTCCGGGGGCAAG CCGAATAA-GACGC CGTA GCGTCGTTATCCGG TGTTTCAGAGCGTCA TERM 1944 1431897 - 1431884 - R 72 -8.1 -3.68222 | opp_overlap 1431876 1431874 1431886, overlap 1431886 GGGCAAGCCGAATAA GACGC CGTA GCGTC GTTATCCGGTGTTTC ydiT 1432212 - 1431919 - | putative ferredoxin ydiS 1433495 - 1432209 - | hypothetical protein TERM 1945 1432421 - 1432434 + g 70 -3.1 -4.82901 | gap 1, overlap 1432421 1432422 GGAAATGCCGCATAT C-GCGT AAC ACGCCG TTTTTCTCCAGCGCG TERM 1946 1432605 - 1432583 - G 74 -7.6 -4.07868 | opp_overlap 1432587 1432589, overlap 1432585 1432586 CGAGATTCAGACAAA GACCGGCGGC GTC GCCGACAATC ATCACGCCGTCATTT ydiR 1434487 - 1433552 - | electron transfer flavoprotein subunit YdiR ydiQ 1435273 - 1434509 - | putative electron transfer flavoprotein YdiQ TERM 1947 1434672 - 1434682 + g 74 -2.4 -5.00616 | TCGCTCGCCAGCCAC GACG TAA CGGC TTTTTTCCCGGCGCC TERM 1948 1435408 - 1435397 - H 79 -4.4 -5.24531 | overlap 1435399 ATCTTGCACAAAAAA TCTG CGAA CAGA GAATCGTTAGCAACC TERM 1949 1435753 - 1435773 + G 83 -7.5 -4.56597 | overlap 1435755 TGTATCAGCGCTGTT TTGACTCCG CCG CGGAGACGA TTTTTGAACAGGACA TERM 1950 1436014 - 1436030 + G 76 -2.9 -5.08255 | CGGCTACCACCTATA CCTGTGC GCT GTATGGG TTTTGTTTTCCAGGT ydiP 1435737 - 1436627 + | putative transcriptional regulator ydiO 1437854 - 1436703 - | putative acyl-CoA dehydrogenase ydiF 1439463 - 1437868 - | putative acetyl-CoA/acetoacetyl-CoA transferase beta subunit TERM 1951 1438126 - 1438137 + g 80 -4.4 -5.00616 | overlap 1438120 CGTAATTTCCGGCAG TTCG CTGA CGAA TTTTTTCACGCGACC aroD 1440375 - 1439617 - | 3-dehydroquinate dehydratase aroE 1441286 - 1440420 - | quinate/shikimate dehydrogenase ydiN 1442588 - 1441353 - | putative transport protein TERM 1952 1441951 - 1441934 - G 74 -3.4 -4.88918 | overlap 1441935 CGACGCCAAATAAAA CGGAAG CTACGC CTTCCA GCCAGACGAGGGGAG TERM 1953 1442704 - 1442724 + r 72 -6.1 -4.26351 | opp_overlap 1442704 1442706 GTTATATGTACATAA CATGGCGTT TAA AATGCCAGG TTTATTGCATTGATA ydiM 1444163 - 1442952 - | putative transport protein TERM 1954 1444146 - 1444131 - G 76 -9 -4.02762 | overlap 1444126 GTAATTAAAATACAA CCCTAC AGCG GTAGGG AAATAACGATTTTTC ydiL 1444663 - 1444304 - | putative cytoplasmic protein TERM 1955 1444709 - 1444688 - R 100 -9.5 -5.21709 | TTTTATATGAAAAAA GTGATGCTA TAAA TAGCACCAC CGACACCGTTTCGAC TERM 1956 1444860 - 1444841 - R 100 -7.1 -6.17292 | AAAGTTAAAAAAAAA GCCCATC GTAGGA GACGGGC AAAGACTACACACAG TERM 1957 1445118 - 1445092 - R 100 -15.8 -3.56862 | opp_overlap 1445091 1445090, overlap 1445082 1445093 1445095 ATAAACGTCGCTAAA GCATCGGGCGGC AAT GCCGCCCGACGG GATTATGACTGCTTG TERM 1958 1445117 - 1445093 - R 100 -19.3 -2.73635 | opp_overlap 1445091 1445090, overlap 1445092 1445082 1445095 TAAACGTCGCTAAAG CATCGGGCGGC AAT GCCGCCCGACG GGATTATGACTGCTT TERM 1959 1445115 - 1445095 - R 100 -18.3 -2.90992 | opp_overlap 1445091 1445090, overlap 1445093 1445092 1445082 AACGTCGCTAAAGCA TCGGGCGGC AAT GCCGCCCGA CGGGATTATGACTGC ydiK 1446239 - 1445121 - | putative inner membrane protein TERM 1960 1446909 - 1446922 + G 81 -2.3 -5.40072 | CTTAATCAAGCGTTA AAGCC GTAT GGCTA TTTTTTTGCGCCGGA TERM 1961 1448094 - 1448079 - g 80 -4.6 -5.07652 | CTGCGCAAAATAAAA GCGGCT TTTG ATCCGC ATAATCGACTTAACC TERM 1962 1448750 - 1448739 - g 76 -3 -5.01732 | AATCTGGCGAAAAAA CATA TCGG TATG GTGGATTTACCTCTG ydiJ 1446504 - 1449560 + | putative oxidase STM1366 1449557 - 1449967 + | hypothetical protein ydiH 1450027 - 1450254 + | putative cytoplasmic protein TERM 1963 1450485 - 1450515 + T 100 -12.7 -5.45802 | CGGATGGGGCCGGAA CCCTTAAGCCTGT ATTGA ACAGACTTAAGGG TTTTTCTTTTCCGGG STM1368 1451888 - 1450542 - | putative Na+-dicarboxylate symporter TERM 1964 1451516 - 1451494 - G 75 -6.9 -4.38712 | overlap 1451474 GGCATGTGCACAAAA GCGCTGGCG TCAAG CCCCAGCAC ATGAGCGGTCAGTAA sufA 1452315 - 1452683 + | iron-sulfur cluster assembly scaffold protein sufB 1452692 - 1454179 + | cysteine desulfurase activator complex subunit SufB TERM 1965 1454347 - 1454317 - gf 71 -6.9 -4.07687 | gap 2, overlap 1454318 1454320 ACGGTTCCGGGAAAA GCACGCTCTCCGCCA CCC TGGCGG-GA-CGTGA AGATTATGAGGTCAC TERM 1966 1454346 - 1454318 - gf 73 -10.4 -3.04398 | gap 2, overlap 1454317 1454320 CGGTTCCGGGAAAAG CACGCTCTCCGCCA CCC TGGCGG-GA-CGTG AAGATTATGAGGTCA TERM 1967 1454516 - 1454534 + GF 72 -10.2 -2.76456 | opp_overlap 1454498, overlap 1454514 1454532 GCTGAATGCCGTGCG CGCCTACC GCG GGCAGGCG TCGTTGGATCGCTTT sufC 1454196 - 1454942 + | cysteine desulfurase ATPase component TERM 1968 1455811 - 1455793 - g 75 -6.6 -4.46073 | CTGGAACATAACAAA GGCTACTG TAA CAGCCGCC AGTTGCACAAGACCA TERM 1969 1456171 - 1456140 - g 73 -10.8 -3.34715 | gap 1, opp_overlap 1456159, overlap 1456138 TAGCGCCCTTAAACA GCAGGTGCTGGCGCG AAT CG-GCCAGCGACTGC CCGGAGGCCTGGTAT sufD 1454917 - 1456188 + | cysteine desulfurase activator complex subunit SufD TERM 1970 1456227 - 1456206 - g 72 -3.7 -4.82901 | TTTCCTGTAGAAAAA GTACGGG CGGATTTT CCCATAC TGCAGCGTGAAGTTA TERM 1971 1456813 - 1456837 + G 77 -4.9 -4.89729 | overlap 1456815 TGATGCACCATGCTG TTGACGTCCAG GCG CTGGACTGCGA TTTTTACGTTTTCTC TERM 1972 1456978 - 1457002 + G 74 -7.8 -4.07568 | gap 1, opp_overlap 1456978 GCCTGACGCAGGGAA CGACATGGGCG AAAG CGCCC-TGGCG TTTTGAGGCGGGAAC sufS 1456185 - 1457405 + | selenocysteine lyase TERM 1973 1457761 - 1457743 - g 74 -2.3 -5.0133 | overlap 1457744 CATGGTTCGAAAAAA TGGCGCT TGCGC AGCACCT CACACCTTCTCGTTC ynhA 1457418 - 1457834 + | cysteine desufuration protein SufE TERM 1974 1457883 - 1457916 + F 83 -6.1 -4.9645 | gap 1, overlap 1457872 1457879 1457876 1457885 1457888 CCTTTGTCGGACGGC GACGTCGCTTTATCCA GAG TGGATAGAGCG-TGTA TTTTGTTATTCTGAT TERM 1975 1457885 - 1457914 + F 76 -8.7 -4.08992 | gap 1, overlap 1457872 1457879 1457876 1457883 1457888 TTTGTCGGACGGCGA CGTCGCTTTATCCA GAG TGGATAGAGCG-TG TATTTTGTTATTCTG TERM 1976 1457888 - 1457912 + F 93 -13.7 -3.60952 | overlap 1457879 1457876 1457885 1457883 GTCGGACGGCGACGT CGCTTTATCCA GAG TGGATAGAGCG TGTATTTTGTTATTC ynhG 1457989 - 1458990 + | hypothetical protein TERM 1977 1459054 - 1459004 - T 100 -15.1 -3.72695 | gap 2, opp_overlap 1459014 1459019, overlap 1459005 1459019 AGCCTTTGCAGCAAA CGACGGACAA-A-AAAATGGCGCAC GAT GTGCGCCATTTTATATTGTGCGTCA AATTATTTACAGATG TERM 1978 1459053 - 1459005 - T 100 -16.4 -2.83403 | gap 2, opp_overlap 1459014 1459019, overlap 1459004 1459019 GCCTTTGCAGCAAAC GACGGACAA-A-AAAATGGCGCAC GAT GTGCGCCATTTTATATTGTGCGTC AAATTATTTACAGAT TERM 1979 1459014 - 1459042 + T 90 -14.7 -3.25102 | opp_overlap 1459005 1459004 1459019, overlap 1459019 GCAAACGACGGACAA AAAAATGGCGCAC GAT GTGCGCCATTTTA TATTGTGCGTCAAAT TERM 1980 1459019 - 1459037 + T 100 -14.6 -4.74285 | opp_overlap 1459005 1459004 1459019, overlap 1459014 CGACGGACAAAAAAA TGGCGCAC GAT GTGCGCCA TTTTATATTGTGCGT TERM 1981 1459037 - 1459019 - T 100 -14.6 -5.64274 | opp_overlap 1459019 1459014, overlap 1459005 1459004 CGACGGACAAAAAAA TGGCGCAC GAT GTGCGCCA TTTTATATTGTGCGT lppB 1459296 - 1459057 - | putative methyl-accepting chemotaxis protein TERM 1982 1459323 - 1459375 + r 100 -17.3 -2.54574 | opp_overlap 1459340, overlap 1459325 1459340 1459368 TATACTTTGTGTGGT TATGTGGGTAAAAAAAATGGCGCAC GAT GTGCGCCATTTTTATTACGCAGGTA CTATTACTTACGGTA TERM 1983 1459325 - 1459373 + r 93 -15.5 -2.80699 | opp_overlap 1459340, overlap 1459323 1459340 1459368 TACTTTGTGTGGTTA TGTGGGTAAAAAAAATGGCGCAC GAT GTGCGCCATTTTTATTACGCAGG TACTATTACTTACGG TERM 1984 1459340 - 1459358 + r 100 -14.6 -5.06414 | opp_overlap 1459340, overlap 1459325 1459323 TGTGGGTAAAAAAAA TGGCGCAC GAT GTGCGCCA TTTTTATTACGCAGG TERM 1985 1459358 - 1459340 - R 100 -14.6 -5.75342 | opp_overlap 1459340 1459325 1459323 TGTGGGTAAAAAAAA TGGCGCAC GAT GTGCGCCA TTTTTATTACGCAGG lpp 1459615 - 1459379 - | murein lipoprotein TERM 1986 1459795 - 1459768 - R 72 -2.6 -5.03747 | AAAGTCCCTAAAAAA CCGAAAGAAAAC AGGG GGCTTCCATCGG ATTCTTCTTAGATAA TERM 1987 1459901 - 1459871 - R 86 -11.3 -3.76224 | opp_overlap 1459879, overlap 1459879 TGGCTATCGATTAAA TAAAAAAAGCGCC GGAAG GGCGCTTTTTTAA ACAAATTAATTCACA TERM 1988 1459879 - 1459893 + r 91 -8.5 -5.01732 | opp_overlap 1459871 1459879 GATTAAATAAAAAAA GCGCC GGAAG GGCGC TTTTTTAAACAAATT TERM 1989 1459893 - 1459879 - R 100 -8.5 -5.99154 | opp_overlap 1459879, overlap 1459871 GATTAAATAAAAAAA GCGCC GGAAG GGCGC TTTTTTAAACAAATT pykF 1461338 - 1459926 - | pyruvate kinase TERM 1990 1460452 - 1460478 + g 72 -3.6 -4.77036 | overlap 1460433 1460462 GCGTTCGCAACGTCG CCTGCTTCTG CGCGGGT CGGACGCGGG TTTTTGATCATAGAA TERM 1991 1461672 - 1461722 + r 70 -9.1 -3.39784 | gap 3, opp_overlap 1461686, overlap 1461671 1461673 1461709 TACGCTGTTTACGAT GTCGCTG--GCGATAACGCCGCCC GAACAG GGGCGGCGTTG-CGCAACAGCGGG TGTTGTTGCGCATAA TERM 1992 1461673 - 1461721 + r 78 -12.6 -2.63549 | gap 3, opp_overlap 1461686, overlap 1461672 1461671 1461709 ACGCTGTTTACGATG TCGCTG--GCGATAACGCCGCCC GAACAG GGGCGGCGTTG-CGCAACAGCGG GTGTTGTTGCGCATA TERM 1993 1461707 - 1461686 - R 90 -14.4 -3.28712 | opp_overlap 1461673 1461672 1461671 TGTCGCTGGCGATAA CGCCGCCC GAACAG GGGCGGCG TTGCGCAACAGCGGG TERM 1994 1461709 - 1461734 + r 83 -14.1 -2.64616 | overlap 1461673 1461672 1461671 GAACAGGGGCGGCGT TGCGCAACAGC GGGT GTTGTTGCGCA TAATGTCAATCGAGC orf48 1463083 - 1461740 - | putative amino acid permease orf32 1463998 - 1463105 - | putative proline iminopeptidase TERM 1995 1464104 - 1464080 - R 79 -9.4 -4.08216 | opp_overlap 1464082 TTATTGTGTGTAAAA CATTACACCA GAAGG TGGCGTAATG TTCCCATTGCAGAAA orf245 1464794 - 1464057 - | putative cytoplasmic protein orf408 1466032 - 1464806 - | putative regulatory protein ttrA 1469417 - 1466355 - | tetrathionate reductase complex subunit A TERM 1996 1467313 - 1467341 + g 70 -8.7 -3.76224 | opp_overlap 1467320 CGGTGAGTGGCGGGG GCGACAACCGGCC AGC GGGCGGTAGTGGC TTTACTGGCTACGCC TERM 1997 1467657 - 1467670 + g 75 -6.7 -4.39828 | GGCTGGATAAGGGGA TTGCC CACC GGCAA TTTTGTCGCGGTATT ttrC 1470432 - 1469410 - | tetrathionate reductase complex subunit C TERM 1998 1469917 - 1469905 - G 70 -9.1 -3.63991 | CATCAGCGCGAAGAA CGCCT GTA AGGCG CTAAGAAACATCGCC ttrB 1471185 - 1470433 - | tetrathionate reductase complex subunit B TERM 1999 1470762 - 1470777 + g 71 -6 -4.30719 | opp_overlap 1470745 1470758 1470761 CCTGGACACAATAGG CGCAGC CGAC GCAGCG TTTGTTATCCACCAC TERM 2000 1470951 - 1470962 + g 74 -7.2 -4.21922 | opp_overlap 1470949 1470950 CCGTCGTACGAAACG CGCC TTGC GGCG TTTGGTTTTCAATAG ttrS 1471349 - 1473127 + | sensory histidine kinase TERM 2001 1473432 - 1473408 - gf 87 -8.5 -4.57073 | overlap 1473423 1473424 GATTTTCTGCAAAAA CCGGTATCGGT AAA ACCGCTACAGG CGGCGCTGGAGCGTG TERM 2002 1473696 - 1473679 - gf 91 -7.7 -5.00616 | GGCGTTTCGAAAAAA TGGCCTC GCCA GAGACCA GAATACGAACAACGT ttrR 1473084 - 1473722 + | response regulator TERM 2003 1473743 - 1473758 + F 78 -4.8 -4.93877 | AAACCGCGTTATTTC TTTGAT TTGC ATCAAA TTTTGTTTAATAGAG orf70 1473820 - 1474032 + | hypothetical protein orf319 1475087 - 1474128 - | putative inner membrane protein orf242 1475988 - 1475260 - | putative regulatory protein ssrB 1476805 - 1476167 - | transcriptional activator ssrA 1479598 - 1476836 - | sensor kinase TERM 2004 1478425 - 1478437 + g 93 -4.7 -5.66868 | TTTTACGTTTGTTAG CTCGC TCA GCGCG TTTTTTTGCTTCATT TERM 2005 1479209 - 1479195 - G 77 -4.2 -4.92757 | opp_overlap 1479195 TGATTAAGAATAAAA CTATCG CGA CGAAAG CTATTTTCATCGATA ssaB 1479999 - 1480400 + | secreted effector protein ssaC 1480402 - 1481895 + | outer membrane secretin precursor TERM 2006 1482910 - 1482922 + G 73 -9.1 -3.86897 | overlap 1482911 CAAGTATCTGCCTGC GCCAG TGG CTGGC TTTGTACAGAGTCGC ssaD 1481876 - 1483087 + | virulence protein ssaE 1483095 - 1483337 + | secretion system effector sseA 1483601 - 1483927 + | secretion system chaperone protein TERM 2007 1484022 - 1483987 - g 73 -5.4 -4.57073 | gap 1, overlap 1483989 TATTGTGTTTAAAAA TAGCTTC-GGCGTCAGC AAC GCTGATACCGGGAGCCA GGATGACTTATCCCA TERM 2008 1484271 - 1484295 + G 81 -12.3 -3.524 | GTGATAATGGTATTC TCATCGATGGT ATG ACCATTGATGA TTATATGGCTAAATA sseB 1483934 - 1484524 + | translocation machinery component TERM 2009 1484677 - 1484689 + G 74 -4.7 -4.7629 | opp_overlap 1484672 GTAAAAGAATTCGCC GGCGC AGC GCGAC TTTTTCAATTGCTGA sscA 1484521 - 1484994 + | secretion system chaparone TERM 2010 1485010 - 1484998 - g 74 -4.9 -4.69664 | GACAGGAGCTAAAAA TGAAT CGA ATTCA CAGTAATAGCGACAG sseC 1484997 - 1486451 + | translocation machinery component TERM 2011 1486640 - 1486619 - g 91 -9.5 -4.57569 | gap 1, overlap 1486607 GGAGCTTGCCAAAAA GCTGCGCGAT ATC AT-GCGCAGC TATAACGTAGAAAAA sseD 1486467 - 1487054 + | translocation machinery component sseE 1487057 - 1487473 + | secreted effector protein sscB 1487525 - 1487959 + | secretion system chaparone TERM 2012 1487992 - 1487969 - f 77 -9 -3.90464 | opp_overlap 1487974, overlap 1487964 1487974 GCTTAAATAACAGAA CGAAATATGA AAAT TCATATTCCG TCAGCGGCAAGTAAT sseF 1487975 - 1488757 + | secreted effector protein TERM 2013 1489140 - 1489150 + G 85 -2.4 -5.49569 | GGCTCACGACAGTAT AGGC AAT GCCG TTTTTTATATTGCTA sseG 1488754 - 1489443 + | secreted effector protein ssaG 1489537 - 1489752 + | type III secretion system apparatus protein ssaH 1489793 - 1490020 + | type III secretion system apparatus protein ssaI 1490032 - 1490280 + | type III secretion system apparatus protein ssaJ 1490277 - 1491026 + | needle complex inner membrane lipoprotein TERM 2014 1491451 - 1491441 - g 70 -6.8 -4.21631 | overlap 1491432 AAGTGATGCAACAAA CTGC ATT GCAG ATCGGTACCGCCATT STM1410 1491044 - 1491592 + | putative cytoplasmic protein ssaK 1491589 - 1492263 + | type III secretion system apparatus protein TERM 2015 1492659 - 1492643 - gf 100 -7.3 -6.04324 | overlap 1492644 TCAAAAAAGAAAAAA CGCGATT TGC AATCGCA ACTGGATACGCTTAC TERM 2016 1492658 - 1492644 - gf 77 -8.6 -4.18934 | overlap 1492643 CAAAAAAGAAAAAAC GCGATT TGC AATCGC AACTGGATACGCTTA ssaL 1492229 - 1493245 + | type III secretion system apparatus protein ssaM 1493303 - 1493671 + | type III secretion system apparatus protein TERM 2017 1494486 - 1494472 - g 82 -11.4 -3.85698 | overlap 1494480 GTCCCGGGTGAGAAA CGCCAG AAC CTGGCG ACAGAGTTGAGTTCT TERM 2018 1494770 - 1494780 + G 90 -5.4 -5.27938 | TTCGTGATATTGACG CCAT GAG ATGG TTTTTATTTGAGGAT ssaV 1493656 - 1495701 + | secretion system apparatus protein SsaV TERM 2019 1496593 - 1496582 - g 72 -2.2 -4.87786 | opp_overlap 1496583, overlap 1496583 GGAATGGGAGAAAAA GGCA GTAT TACC GCATTTTATACGGTA ssaN 1495691 - 1496992 + | type III secretion system ATPase TERM 2020 1497151 - 1497173 + G 79 -7.8 -4.46854 | AAAGAATTAATGGGC TGGCAAGGTA CGT TATCTTGTCA TTTATTGTTGGATAA ssaO 1496995 - 1497372 + | type III secretion system apparatus protein ssaP 1497353 - 1497727 + | type III secretion system apparatus protein ssaQ 1497708 - 1498676 + | type III secretion system protein ssaR 1498744 - 1499391 + | type III secretion system protein ssaS 1499388 - 1499654 + | type III secretion system apparatus protein ssaT 1499655 - 1500434 + | type III secretion system apparatus protein TERM 2021 1501357 - 1501372 + G 71 -4.7 -4.63089 | CGTTGTTGAAAATGT TGAGC TGGCCC GCTCA TTATTTTTTGAAGTG ssaU 1500431 - 1501489 + | secretion system apparatus protein SsaU TERM 2022 1501953 - 1501934 - T 90 -10 -4.39828 | opp_overlap 1501936 1501943 1501945 AACATGTCGAGAAAA TAGCCGCC ATGC GACGGCTA TCGTCGTATTATCGC ydhE 1503335 - 1501962 - | multidrug efflux protein TERM 2023 1502647 - 1502660 + g 74 -3.1 -4.86621 | ATGACGACGCTATCG GGTTT GCCA AAGCC TTTTTCATTACGAAT TERM 2024 1502950 - 1502912 - G 100 -10.2 -4.88918 | overlap 1502914 CTACCTGAAAGAAAA GGTATCCTGGCGCGCCCC ACA GCAGCGCGCGAAGATAAC CCACGGCTTTATCGG TERM 2025 1503176 - 1503164 - G 77 -4.8 -4.93877 | CGTGACCAAACAAAA TGGC GGGAA GCCA GATAGAGGTGCCGAT TERM 2026 1503393 - 1503377 - H 85 -7.2 -4.946 | overlap 1503368 ATGAAAGACTAAAAA GCCGCC GAAGT GGCAGC CAAAAGAAATAGCAG TERM 2027 1503511 - 1503525 + H 79 -4.2 -5.18866 | TCCACCTGCTATTGT GCTGAA CAG TTCTGC TTTTATTTATTTCAG ribE 1503552 - 1504193 + | riboflavin synthase subunit alpha TERM 2028 1504237 - 1504201 - T 74 -6.8 -4.27316 | gap 2, opp_overlap 1504205, overlap 1504204 1504206 1504207 TTGGCTAACGGAAAA TAA-GAT-TCCCCCGCAT GAA ATGCGGGGGAGATGATTA GCGAGGAACGCGCAG TERM 2029 1504233 - 1504204 - T 87 -10.1 -4.25859 | gap 1, opp_overlap 1504205, overlap 1504201 1504206 1504207 GCTAACGGAAAATAA GAT-TCCCCCGCAT GAA ATGCGGGGGAGATG ATTAGCGAGGAACGC TERM 2030 1504205 - 1504231 + T 81 -13 -2.70932 | opp_overlap 1504204 1504201 1504206 1504207 CTAACGGAAAATAAG ATTCCCCCGCAT GAA ATGCGGGGGAGA TGATTAGCGAGGAAC TERM 2031 1504230 - 1504206 - T 100 -14.3 -3.72228 | opp_overlap 1504205, overlap 1504204 1504201 1504207 TAACGGAAAATAAGA TTCCCCCGCAT GAA ATGCGGGGGAG ATGATTAGCGAGGAA TERM 2032 1504229 - 1504207 - T 100 -17.8 -2.82253 | opp_overlap 1504205, overlap 1504206 1504204 1504201 AACGGAAAATAAGAT TCCCCCGCAT GAA ATGCGGGGGA GATGATTAGCGAGGA cfa 1505383 - 1504235 - | cyclopropane fatty acyl phospholipid synthase ydhC 1506878 - 1505673 - | inner membrane transport protein YdhC TERM 2033 1506073 - 1506086 + g 70 -3.1 -4.82901 | AGCCACGGAAGCAAT TGGTA GCCC TGCCA TTTTTGTAGCGCCGC TERM 2034 1506578 - 1506601 + g 73 -8.8 -3.85698 | gap 1, opp_overlap 1506558 1506557 1506576 CGGCCTGCACGAAGC GCAGCGTCAGC AGT GCTGCCGC-GC TTTCTACCCACAGCA TERM 2035 1506744 - 1506732 - G 70 -3.3 -4.69027 | opp_overlap 1506740, overlap 1506720 AAAGCCAGCTAAAAA CAGGC TGA GGCTG GCGCTGACCGCGGCG TERM 2036 1507161 - 1507182 + G 75 -5.7 -4.56597 | opp_overlap 1507166, overlap 1507162 1507164 TCACCGTGATGTTGA ACTGACGCC TGCT GGCGTCTGG TTTTTAAAAGAAGGG TERM 2037 1507164 - 1507179 + G 71 -10.4 -3.23708 | opp_overlap 1507166, overlap 1507162 1507161 CCGTGATGTTGAACT GACGCC TGCT GGCGTC TGGTTTTTAAAAGAA ydhB 1506991 - 1507923 + | putative DNA-binding transcriptional regulator purR 1508945 - 1507920 - | DNA-binding transcriptional repressor PurR TERM 2038 1508841 - 1508851 + g 77 -8.2 -4.15044 | overlap 1508848 AATTGCCGCCCAGAC CGCG TTA CGCG TTTCTTCAGCGACAA TERM 2039 1508848 - 1508872 + g 81 -7.1 -4.79174 | overlap 1508841 1508864 GCCCAGACCGCGTTA CGCGTTTCTTC AGC GACAAAACGCG TTTTGTTGATTACGT TERM 2040 1509403 - 1509382 - R 100 -14.5 -4.07885 | opp_overlap 1509375 1509374 TATCCCTCTCTAAAA CGCAGAAGG CGTA CCTTCTGCG TACTCAGACTTATGC sodB 1509994 - 1509413 - | superoxide dismutase TERM 2041 1510088 - 1510118 + r 70 -9.8 -3.05066 | opp_overlap 1510089 1510090 TGGCGCAAAAGAAGA AGTTATCCTGTCGT TAA ACGACAGGATAAAA TATTAGCGAATTGTT TERM 2042 1510117 - 1510089 - R 95 -13.3 -4.20868 | opp_overlap 1510088, overlap 1510090 GGCGCAAAAGAAGAA GTTATCCTGTCGT TAA ACGACAGGATAAA ATATTAGCGAATTGT TERM 2043 1510116 - 1510090 - R 100 -16.8 -3.11798 | opp_overlap 1510088, overlap 1510089 GCGCAAAAGAAGAAG TTATCCTGTCGT TAA ACGACAGGATAA AATATTAGCGAATTG ydhO 1510975 - 1510121 - | putative cell wall-associated hydrolase TERM 2044 1510506 - 1510519 + g 74 -2.3 -5.09245 | ATGAGTTTGGACATC GCGGT TTTC GTCGC TTTTTGTACTTTTGC TERM 2045 1511095 - 1511081 - H 86 -4.3 -5.51402 | ACAGATGTAAAAAAA TAGCA ATTAA TGCTA AACACGAACGCGTTA TERM 2046 1511318 - 1511299 - g 91 -7.9 -5.1101 | CCACTATCGAAAAAA TTCAGCG CCAGAT CGCTGAA AACCCGATTCTCCTG ydhD 1511277 - 1511624 + | hypothetical protein TERM 2047 1511658 - 1511641 - T 89 -11.3 -4.05446 | opp_overlap 1511641 CTGTGCAAGGAGAAA GCGACCT GTAA AGGTCGC TTTTTTACCGCCATC TERM 2048 1511641 - 1511658 + T 100 -11.3 -5.0133 | opp_overlap 1511641 CTGTGCAAGGAGAAA GCGACCT GTAA AGGTCGC TTTTTTACCGCCATC rnt 1512349 - 1511702 - | ribonuclease T TERM 2049 1511781 - 1511771 - G 75 -6.8 -4.43859 | overlap 1511776 GACAATTTCACAAAA CAGC ACC GCTG TCCGCTCGGTATCAT TERM 2050 1512326 - 1512312 - G 75 -7.1 -4.45077 | TAAAAACCACGAAAA CGGTC GCACA GACCG GAAAGTTGAGCGTTA TERM 2051 1512444 - 1512417 - R 100 -14.8 -4.2828 | opp_overlap 1512431, overlap 1512420 CGGGATGCAGTAAAA CAACGGGCGCAG TGAC CTGCGCCCGGCG GGGGATCAGTTACCC TERM 2052 1512441 - 1512420 - R 100 -17.3 -4.26327 | opp_overlap 1512431, overlap 1512417 GATGCAGTAAAACAA CGGGCGCAG TGAC CTGCGCCCG GCGGGGGATCAGTTA gloA 1512857 - 1512450 - | glyoxalase I nemA 1514023 - 1512926 - | N-ethylmaleimide reductase TERM 2053 1514095 - 1514076 - R 89 -6.4 -5.41941 | TAAAGGAAATAAAAA CGCCTG TTACTGCT CAGGCG TTGCAATGATGGTCT ydhM 1514681 - 1514082 - | putative transcriptional repressor TERM 2054 1514646 - 1514624 - G 71 -7.6 -4.03234 | opp_overlap 1514624, overlap 1514625 CCCGTTGCATACAAA GCTGCTCGCC GGT GGCCAGCAGA TGTTCGCGGGTATCG TERM 2055 1514645 - 1514625 - G 72 -11.1 -3.01726 | opp_overlap 1514624, overlap 1514624 CCGTTGCATACAAAG CTGCTCGCC GGT GGCCAGCAG ATGTTCGCGGGTATC ydhL 1514784 - 1515023 + | putative oxidoreductase TERM 2056 1515432 - 1515421 - g 85 -4.4 -5.17353 | opp_overlap 1515421 ACAGTCATTAAAAAA TCTG GCGA CAGA TTATCTGGATATGTT TERM 2057 1515530 - 1515542 + G 80 -9.1 -4.208 | opp_overlap 1515519 1515520 1515528 CAAAGCGGCAAAGTG CGCCA TTT TGGCG TTTCTAATTTTACGC ydhF 1515074 - 1515970 + | putative aldo/keto reductase sodC 1516050 - 1516571 + | superoxide dismutase STM1441 1518586 - 1516547 - | putative inner membrane protein TERM 2058 1517270 - 1517260 - G 76 -5.4 -4.77757 | GCGGAAAAAGGAAAA GCAA GAA TTGC CACAGATCGGTGATT ydhJ 1519482 - 1518586 - | putative multidrug resistance efflux pump TERM 2059 1518684 - 1518708 + gr 83 -10.7 -3.83026 | CCGGTACGCGTTGCG CCAGACGTACC CAC GGTACGTTGGG TTTGATATCGGGCAC TERM 2060 1518967 - 1518979 + gr 70 -10.5 -2.54881 | opp_overlap 1518954, overlap 1518966 1518965 AAGGTTGGTCACCCA GCCGG ATA CCGGC GCTTTTACTTCCGTC ydhI 1519685 - 1519449 - | putative inner membrane protein slyA 1519886 - 1520320 + | transcriptional regulator SlyA slyB 1520835 - 1520368 - | putative outer membrane lipoprotein anmK 1521107 - 1522228 + | anhydro-N-acetylmuramic acid kinase mliC 1522316 - 1522645 + | lysozyme inhibitor pdxH 1522704 - 1523360 + | pyridoxamine 5'-phosphate oxidase TERM 2061 1524071 - 1524051 - g 74 -7.5 -4.15044 | GCTTGCCTGAATAAA CTGCACGGC GTT GCCTTACAG ATTGGCGGTTCTGAC TERM 2062 1524377 - 1524362 - g 81 -3.9 -5.21506 | overlap 1524364 1524372 AGAAGAAGATAAAAA CAGCG GTAAAG CGCCG CGCGCGCAGTATGTG TERM 2063 1524584 - 1524552 - g 72 -4 -4.81249 | overlap 1524553 GTTGAAATGGAAAAA GGCGCCGACCTG ATGCAGGCG CTGGTAGACGCC GAACTCCAGCCGTCA tyrS 1523487 - 1524761 + | tyrosyl-tRNA synthetase TERM 2064 1524773 - 1524798 + F 80 -6.1 -4.87626 | opp_overlap 1524774 1524776, overlap 1524776 ATAAGGCATTAAGTA ACAGGGAGTGA GAAA TCACTCCCTTA TTTTTGATGTTCAGG TERM 2065 1524797 - 1524774 - f 73 -9.6 -3.41581 | opp_overlap 1524773 1524776, overlap 1524776 TAAGGCATTAAGTAA CAGGGAGTGA GAAA TCACTCCCTT ATTTTTGATGTTCAG TERM 2066 1524776 - 1524795 + F 100 -12.2 -4.53398 | opp_overlap 1524774 1524776, overlap 1524773 AGGCATTAAGTAACA GGGAGTGA GAAA TCACTCCC TTATTTTTGATGTTC TERM 2067 1524795 - 1524776 - f 81 -12.2 -3.27297 | opp_overlap 1524776 1524773, overlap 1524774 AGGCATTAAGTAACA GGGAGTGA GAAA TCACTCCC TTATTTTTGATGTTC pdxY 1524821 - 1525681 + | pyridoxamine kinase gst 1526345 - 1525740 - | glutathionine S-transferase TERM 2068 1526427 - 1526405 - R 100 -13.5 -6.17184 | opp_overlap 1526401 ACGAGCAAAAAAAAA GCCGCTAAC GCACA GTTAGCGGC CTGAATGTTGTTTCC TERM 2069 1526462 - 1526473 + r 74 -5.8 -4.59109 | AAATTAAACTGTAGC GGCT TTAG AGCC TTTTTCAGCGGTATC tppB 1527955 - 1526450 - | putative tripeptide transporter permease TERM 2070 1527903 - 1527930 + g 77 -8.6 -4.07772 | gap 1, opp_overlap 1527890 1527887 1527909 1527918, overlap 1527896 1527904 1527914 AACGCCTTCGGTTGT TTGAAAGCGTTCA AAC TGA-CGCTTTCAG TTGGTTTTTTGTTTG TERM 2071 1527914 - 1527934 + g 91 -4 -5.64421 | opp_overlap 1527909 1527918, overlap 1527896 1527904 1527903 TTGTTTGAAAGCGTT CAAACTGA CGCTT TCAGTTGG TTTTTTGTTTGCAGT nth 1529192 - 1528557 - | endonuclease III TERM 2072 1529209 - 1529248 + r 81 -8.5 -4.54301 | gap 1, overlap 1529211 AGACTTTCCCTGTTT CACC-TGCCGGAACAGCG GAAGG CGCGGTTTCGGCGCGGCG TTTCTTCATTTTTTC ydgQ 1529884 - 1529192 - | SoxR-reducing system protein RsxE ydgP 1530507 - 1529887 - | electron transport complex protein RnfG rnfD 1531569 - 1530511 - | electron transport complex protein RnfD TERM 2073 1530843 - 1530855 + g 71 -4.8 -4.56597 | AACTGACCGGGATAT GCCA GCGGA TGGC TTTTTGCCACAGCAG TERM 2074 1531472 - 1531459 - G 90 -5.9 -5.26875 | overlap 1531462 TCCCCAACCAAAAAA CCACG TCTG CGCGG CAATCCCCGGCAGAG TERM 2075 1531590 - 1531602 + r 86 -4.7 -5.47218 | CCTCGTTAACAACCT GCTGC TGT GCTGC TTTTTTTGCCTGAAC STM1457 1533777 - 1531570 - | electron transport complex protein RnfC TERM 2076 1532402 - 1532424 + g 76 -3.2 -5.06816 | TGACGAGCCTCAAAA CGCGCTTTGG CTT CGGCGGCGCG TTTTTCTTCAAGCCT TERM 2077 1533618 - 1533633 + g 70 -6.8 -4.08767 | CGCACAGCTCGCCCT CAGCGC CAAT GTGCTG TTTTAAAGGGATAAC ydgM 1534348 - 1533770 - | electron transport complex protein RnfB STM1459 1534929 - 1534348 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2078 1534452 - 1534433 - G 71 -6.3 -4.30576 | overlap 1534435 GCGTTACCACGAAAA GGGGCGG GCACAT CCGCCAC GGCAAGGCGTTCGCG TERM 2079 1534514 - 1534502 - G 77 -4.7 -4.90869 | overlap 1534503 ATCACTAATGAAAAA CCGAC GGC GGCGG AAAATCCGTACAGCG ydgK 1535446 - 1535006 - | putative inner membrane protein ydgT 1535765 - 1535535 - | oriC-binding nucleoid-associated protein TERM 2080 1535841 - 1535814 - H 89 -6.2 -5.3472 | AAAAAATAAACAAAA CCGCACCAGTGA GAGG TCAGGGGTGCAG GTAAAAAGGGAATAT TERM 2081 1535894 - 1535873 - H 73 -11.5 -2.61695 | overlap 1535872 1535870 CTTACCGGTAAAGAG TCAGGCGCC ACAT GGCGCCTGG GGCGAAAGGTTAACG TERM 2082 1536752 - 1536766 + G 82 -5.6 -5.03314 | opp_overlap 1536753, overlap 1536753 CGTCTTCCACAACCG ACGCTG GGA CAGCGA TTTTTTGACGCTGAA ydgJ 1536381 - 1537421 + | putative oxidoreductase TERM 2083 1537516 - 1537528 + T 72 -4.7 -4.71061 | overlap 1537514 CCTCGGCCACTTTTT CGCGC AGC GCACG TTTTTCGCTATCGCT add 1538497 - 1537496 - | adenosine deaminase TERM 2084 1537984 - 1538012 + g 74 -9.7 -3.64198 | gap 1 CGGGAAAGCCCAGCT CATCACCG-GCT AAATCC AGCGCGGTGATG TTCTCTCTGTGCGCC TERM 2085 1538636 - 1538660 + r 77 -11.4 -3.15013 | overlap 1538635 1538632 1538653 TCATTCTCTTTAACG CGCCCCCG GTCAGCTCA CGGGGGCG TCTCTGTTATCGCCT ydgA 1540709 - 1539201 - | putative periplasmic protein TERM 2086 1540754 - 1540733 - R 100 -13 -4.38116 | overlap 1540747 TCCATAAAAATGAAA CCAGGCGG ATTAAA CCGCCTGG AGGAGTTTTACGTCT manA 1541987 - 1540812 - | mannose-6-phosphate isomerase TERM 2087 1541754 - 1541742 - G 74 -6.9 -4.33928 | TACTTTAAACAGAAA CGGCA GTT CGCCG AAACGGTTGGCTACC TERM 2088 1541768 - 1541788 + g 80 -4.5 -5.093 | opp_overlap 1541758, overlap 1541774 CGAAACGGTTGGCTA CCGCTTCGC CCA GCATGGCGG TTTTATTCTTTTCGA TERM 2089 1542445 - 1542432 - g 70 -6.7 -4.1899 | GCAGGCCAGTGAAAA CGACA AATA TGTCG CGCTGCAATTCCTGC TERM 2090 1543858 - 1543833 - g 75 -11.1 -3.33696 | opp_overlap 1543833 1543830 1543824 CGCTGCGTTAAGTAA TGTCGCCGCCC TGCG GGGCGGTAACA TGATTCGCTATTTTG fumA 1542187 - 1543929 + | fumarase A TERM 2091 1545317 - 1545293 - g 77 -8.5 -4.07535 | overlap 1545294 1545308 AAGGCGCATAAAGAA GGGCTGACGCT CAA AGCCTCAGCCG TGGCATTAGGATACC TERM 2092 1545316 - 1545294 - g 76 -12 -3.03798 | overlap 1545293 1545308 AGGCGCATAAAGAAG GGCTGACGCT CAA AGCCTCAGCC GTGGCATTAGGATAC fumC 1544000 - 1545403 + | fumarate hydratase tus 1546329 - 1545400 - | DNA replication terminus site-binding protein TERM 2093 1545436 - 1545456 + g 71 -11.1 -2.90813 | opp_overlap 1545435 1545436 1545438, overlap 1545412 1545438 CAGTCGCGGAATAAT CAGTCGCAG CGG CTGCGCCTG TGGTTTAAAACGGTG TERM 2094 1545733 - 1545752 + g 100 -7 -5.44119 | overlap 1545712 1545713 CGTCCACGGCGGGAC GCTGCGCG GCGA CGCGAGGC TTTTTTTCAACTGGC TERM 2095 1546124 - 1546103 - G 71 -4.4 -4.67607 | opp_overlap 1546112 1546113 TGTTGAATAAACAAA TGGCGATA GTGACG TAGCGCCA GCGCTTCGGCCTCTT rstB 1547706 - 1546405 - | sensor protein RstB TERM 2096 1547443 - 1547409 - G 73 -10.6 -3.33261 | opp_overlap 1547430, overlap 1547411 1547412 CGTCAAGCGCGACAA TATCGCCTTCACGCAG TCG CTGCGTGGTGGCGGCA TCAAGCTTATAGTGA TERM 2097 1547441 - 1547411 - G 74 -11 -3.23447 | opp_overlap 1547430, overlap 1547409 1547412 TCAAGCGCGACAATA TCGCCTTCACGCAG TCG CTGCGTGGTGGCGG CATCAAGCTTATAGT TERM 2098 1547440 - 1547412 - G 81 -14.5 -2.53747 | opp_overlap 1547430, overlap 1547411 1547409 CAAGCGCGACAATAT CGCCTTCACGCAG TCG CTGCGTGGTGGCG GCATCAAGCTTATAG TERM 2099 1547763 - 1547783 + r 77 -11.1 -3.28791 | opp_overlap 1547734, overlap 1547737 TGACGAAAAAGATTT CCCGTCAGC GCC GCTGGTGGG TTATAAAAGCAGGCT STM1472 1549523 - 1547817 - | putative periplasmic protein TERM 2100 1549654 - 1549636 - R 100 -17.4 -5.45813 | GATGAAAAAAGAAAA GCCCGCCG AAA CGGCGGGC TTGAGAAGAATTAAT ompN 1550809 - 1549676 - | outer membrane protein N precursor rstA 1552020 - 1551289 - | DNA-binding transcriptional regulator RstA ydgC 1552147 - 1552482 + | putative inner membrane protein TERM 2101 1552501 - 1552540 + T 81 -12.4 -3.28712 | overlap 1552502 TGGCAAAGACCGTGG TTTCCCCATCGTAATA CAGACGGA TATTACGATGGGGAGG TTGTCAACCCACCAG TERM 2102 1552502 - 1552539 + T 83 -13.7 -2.57132 | overlap 1552501 GGCAAAGACCGTGGT TTCCCCATCGTAATA CAGACGGA TATTACGATGGGGAG GTTGTCAACCCACCA ydgI 1553926 - 1552544 - | putative amino acid transporter TERM 2103 1553230 - 1553245 + g 75 -3.9 -4.89063 | CCGCCAGTAGCGTGG CGCGG CCTACA TCGCG TTTATTTTTCGCTCG TERM 2104 1554174 - 1554226 + r 71 -7.7 -3.87815 | gap 1, opp_overlap 1554177, overlap 1554211 ATCGTGTAGGCCTGA TAAGGCAGGTATGCGCCATCCGGC GAGAAA GCCTGATGGCG-ACGCGCGCCTTA TTTATAGAGGTCGGC ydgH 1555168 - 1554224 - | putative periplasmic protein TERM 2105 1554626 - 1554643 + g 70 -7 -4.09117 | opp_overlap 1554609, overlap 1554609 1554606 GTCCGGGCTCTGGAC GATGCG TTTTTT CGCATC TTGTTTATAGATAAA TERM 2106 1554968 - 1554982 + g 71 -7.8 -4.03234 | opp_overlap 1554968 GTCGACAACATAGAA GGAGGC TGC GCCTTC TTTATCTGCGCGGCG TERM 2107 1556199 - 1556164 - g 71 -9.7 -3.55444 | gap 1, overlap 1556167 TCTTTACCGGGCAAA TCACCGCCGCCGG-GA AAGTG CCGCCGGCGAAGGTGA TGGTGATTGGCGCGG pntA 1555695 - 1557224 + | NAD(P) transhydrogenase subunit alpha TERM 2108 1558244 - 1558231 - g 72 -3.7 -4.72386 | opp_overlap 1558238 GAAATCACCGAAAAA CTGCG CGCG CGCGG GATCAACGTGCGTTT pntB 1557235 - 1558623 + | pyridine nucleotide transhydrogenase TERM 2109 1558640 - 1558657 + T 100 -12.7 -4.87786 | CTTTTAAACGTGCGG CGGCCTC TTCG GAGGCCG TTTTTATACACTTCA tqsA 1559832 - 1558798 - | putative transport protein ydgF 1560250 - 1560612 + | multidrug efflux system protein MdtJ ydgE 1560599 - 1560928 + | multidrug efflux system protein MdtI TERM 2110 1560959 - 1560934 - T 71 -10.4 -2.62263 | opp_overlap 1560926 ATTTGCCTGAGACGA TCGCTGCCGG TTGGTT CAGGCAGCGA TTCCCGCATTAATCC STM1484 1561789 - 1560968 - | putative protease TERM 2111 1562043 - 1562025 - R 84 -8.1 -4.57569 | gap 1, opp_overlap 1562027, overlap 1562013 1562026 1562027 TTAGCGCCGTAAAAA CGGGCGCG GGGG CGCGCC-G CAGCATGTTACGACT TERM 2112 1562042 - 1562027 - R 76 -11.8 -2.60211 | opp_overlap 1562027, overlap 1562013 1562025 1562026 AGCGCCGTAAAAACG GGCGCG GGGG CGCGCC GCAGCATGTTACGAC STM1485 1562306 - 1562058 - | acid shock protein precursor TERM 2113 1562657 - 1562693 + r 89 -9.4 -4.65263 | opp_overlap 1562656 1562659, overlap 1562660 1562661 ATCGTGGCGTGAAAC CAGCCCGGCGATAGCG CACGT TGCTATCGCCGGATTA TTTCTTTTCAGGCGT TERM 2114 1562691 - 1562659 - R 74 -11.3 -2.90496 | opp_overlap 1562657 1562660 1562661, overlap 1562656 CGTGGCGTGAAACCA GCCCGGCGATAGC GCACGTT GCTATCGCCGGAT TATTTCTTTTCAGGC TERM 2115 1562660 - 1562690 + r 100 -13.3 -4.43397 | opp_overlap 1562659 1562656, overlap 1562657 1562661 GTGGCGTGAAACCAG CCCGGCGATAGCG CACGT TGCTATCGCCGGA TTATTTCTTTTCAGG TERM 2116 1562661 - 1562689 + r 100 -16.8 -3.24954 | opp_overlap 1562659 1562656, overlap 1562660 1562657 TGGCGTGAAACCAGC CCGGCGATAGCG CACGT TGCTATCGCCGG ATTATTTCTTTTCAG ynfM 1563954 - 1562701 - | putative transport protein TERM 2117 1564339 - 1564307 - g 81 -11.9 -3.54424 | opp_overlap 1564315, overlap 1564308 CCTGAGTCTGGTAAA CGACGCCGCCGCTCG CGC CGAGCGGTTGCATCA GGGCGAAGCGGGTGA TERM 2118 1564338 - 1564308 - g 79 -13.2 -2.72511 | opp_overlap 1564315, overlap 1564307 CTGAGTCTGGTAAAC GACGCCGCCGCTCG CGC CGAGCGGTTGCATC AGGGCGAAGCGGGTG TERM 2119 1564315 - 1564331 + G 84 -13.7 -3.05384 | opp_overlap 1564308 1564307 TGGTAAACGACGCCG CCGCTCG CGC CGAGCGG TTGCATCAGGGCGAA TERM 2120 1564397 - 1564409 + G 71 -6.3 -4.28254 | GCCTTTTATTCGGGC GGTAT CGC ATACC TTTTCGCTGTTCCGC TERM 2121 1564640 - 1564658 + G 83 -7.4 -4.56775 | opp_overlap 1564616 CAGTCTGACAGAACT GGCGGAAG AAC CTTTCGTC TTTTTCGACCCACAT ynfL 1564074 - 1564973 + | putative transcriptional regulator TERM 2122 1565328 - 1565299 - g 77 -8.5 -4.08317 | gap 1, overlap 1565301 GAACTTGAAATTAAA GA-GGCGGGCAGTC GTG GACGTCCCGCCGTC GGGCTGATGGTGGAA TERM 2123 1565325 - 1565301 - g 79 -11.3 -3.62756 | overlap 1565299 ACTTGAAATTAAAGA GGCGGGCAGTC GTG GACGTCCCGCC GTCGGGCTGATGGTG mlc 1565101 - 1566321 + | pts operon transcriptional repressor bioD 1566447 - 1567142 + | putative dithiobiotin synthetase STM1490 1568351 - 1567098 - | putative voltage-gated ClC-type chloride channel ClcB TERM 2124 1567183 - 1567213 + g 71 -9.7 -3.56092 | opp_overlap 1567186, overlap 1567184 1567186 ACACAGGCAATCAGC AGACCGGGGAGTA ACTGA TACTCGCCGGTCA TTTCACAAATCATCA TERM 2125 1567184 - 1567212 + g 79 -13.2 -2.73441 | opp_overlap 1567186, overlap 1567183 1567186 CACAGGCAATCAGCA GACCGGGGAGTA ACTGA TACTCGCCGGTC ATTTCACAAATCATC TERM 2126 1567415 - 1567435 + g 70 -6.8 -4.07568 | GCGCGCCAGACCCGC TGCTGGCG AGCAC CGCCAGGA TTTTGCACACAAAAA TERM 2127 1568461 - 1568451 - R 74 -6.8 -4.2349 | GCGTCAGACGCAAAA GCAC TAT GTGC GATATAATATTGCGT TERM 2128 1568478 - 1568529 + r 79 -8.1 -4.31412 | gap 1, opp_overlap 1568469 1568481 1568484 1568489, overlap 1568484 ATATAATATTGCGTA CA-ATAATGATACTGCCGGATAGC GAGAG GCTATCCGGCGGCAACGTTAGCTG TTTTCGTGAATATTT TERM 2129 1568525 - 1568481 - R 85 -12.2 -3.31248 | opp_overlap 1568478 1568484, overlap 1568469 1568484 1568489 TAATATTGCGTACAA TAATGATACTGCCGGATAGC GAGAG GCTATCCGGCGGCAACGTTA GCTGTTTTCGTGAAT TERM 2130 1568522 - 1568484 - R 79 -9.5 -3.7941 | opp_overlap 1568478 1568484, overlap 1568481 1568489 TATTGCGTACAATAA TGATACTGCCGGATAGC GAGAG GCTATCCGGCGGCAACG TTAGCTGTTTTCGTG TERM 2131 1568484 - 1568522 + r 82 -11.7 -3.29856 | opp_overlap 1568484 1568481 1568489, overlap 1568478 TATTGCGTACAATAA TGATACTGCCGGATAGC GAGAG GCTATCCGGCGGCAACG TTAGCTGTTTTCGTG TERM 2132 1568517 - 1568489 - R 88 -14.6 -3.04443 | opp_overlap 1568484 1568478, overlap 1568484 1568481 CGTACAATAATGATA CTGCCGGATAGC GAGAG GCTATCCGGCGG CAACGTTAGCTGTTT STM1491 1569671 - 1568523 - | proline/glycine betaine transport systems STM1492 1570318 - 1569671 - | putative ABC transporter permease component TERM 2133 1570059 - 1570045 - G 86 -7 -5.03405 | overlap 1570047 AAGAGTAGAGAAAAA CGGCCG TCA CGGCGG GCAGAACGCCAATAC STM1493 1571230 - 1570328 - | putative ABC transporter periplasmic component TERM 2134 1570789 - 1570815 + g 70 -8.8 -3.65542 | overlap 1570787 1570792 GGACCTGTTCGATTT TTGCCACCATTT GCG AGATGGTGGTGA TATTTTCCGACTCGG STM1494 1571969 - 1571259 - | putative transport system permease component TERM 2135 1571785 - 1571774 - G 71 -5.8 -4.25104 | overlap 1571775 GTCGGCTGAGTAAAA TCCC GCTC GGGA TACCGACCAGTAAAG TERM 2136 1572196 - 1572208 + r 84 -7.7 -4.87665 | AAATAGAAGCGCGGT GTGAC GTT GTCAC TTTTTGTAGATAAAA TERM 2137 1572262 - 1572245 - R 84 -8.4 -4.614 | opp_overlap 1572245, overlap 1572240 CGTAATGAGAGAAAA GGCAGG TAAAAT CCTGCC TTTTGTGGGGATTAA TERM 2138 1572245 - 1572262 + r 81 -8.4 -4.4017 | opp_overlap 1572240 1572245 CGTAATGAGAGAAAA GGCAGG TAAAAT CCTGCC TTTTGTGGGGATTAA ynfI 1572888 - 1572274 - | twin-argninine leader-binding protein DmsD TERM 2139 1572851 - 1572829 - G 72 -2.6 -4.89477 | overlap 1572832 CGGCGAATAATAAAA CAACGCGC CAAGAAC ACGCGCCG TTACTGCAAAATCAT TERM 2140 1572924 - 1572905 - R 72 -9.2 -3.6512 | opp_overlap 1572904, overlap 1572898 1572897 1572906 CAAACAATCCCGAAA GGTGCGGG TCGC CCCGCACG CATAAATTAACCTGC TERM 2141 1572923 - 1572906 - R 79 -12.7 -2.78349 | opp_overlap 1572904, overlap 1572898 1572897 1572905 AAACAATCCCGAAAG GTGCGGG TCGC CCCGCAC GCATAAATTAACCTG STM1496 1573788 - 1572931 - | putative dimethylsulfoxide reductase TERM 2142 1573657 - 1573645 - G 95 -5.5 -5.38047 | overlap 1573647 1573648 CAGCCACAGAAAAAA CATGC TGC GCACG ATGCGCTGACGGGCG STM1497 1574407 - 1573790 - | putative dimethyl sulphoxide reductase STM1498 1576853 - 1574418 - | putative dimethyl sulphoxide reductase TERM 2143 1574572 - 1574600 + g 95 -13.1 -4.08767 | CCCTGGCCGATAGCG GTGACGCCGGGCA ATA TGCGCGGCGTGAC TTTTGCCGGAATGAG TERM 2144 1574989 - 1575002 + g 93 -4.5 -5.45652 | overlap 1574997 CGGAAAGCGACGTAG TGCTC CTCC GGGCA TTTTTTCTTGAAAAT STM1499 1579393 - 1576952 - | putative dimethyl sulphoxide reductase chain A1 TERM 2145 1577192 - 1577203 + g 83 -7.2 -4.59773 | opp_overlap 1577173 AACCTTATCGCCATT CGCG ATAC CGCG TTTTTGCGCATCGAG TERM 2146 1578926 - 1578944 + g 73 -5.3 -4.59773 | gap 1, opp_overlap 1578916, overlap 1578927 ATAAACGGCTTCATT G-CCGTAG GTCT CTACGGTC TTTTTCAGGCTGGCG TERM 2147 1578927 - 1578942 + g 73 -9 -3.91506 | opp_overlap 1578916, overlap 1578926 TAAACGGCTTCATTG CCGTAG GTCT CTACGG TCTTTTTCAGGCTGG ynfD 1579855 - 1579547 - | putative outer membrane protein ynfC 1579959 - 1580669 + | hypothetical protein TERM 2148 1580696 - 1580723 + T 71 -10.5 -2.73771 | opp_overlap 1580671 1580672, overlap 1580675 1580700 1580704 TGCGACTCTCCGTGA CTACCGCGCCG CGCTTA CTGCGCGGTGG GTTTCAGGAGTGTAG TERM 2149 1580700 - 1580724 + T 79 -10.6 -3.56643 | opp_overlap 1580671 1580672, overlap 1580675 1580696 1580704 ACTCTCCGTGACTAC CGCGCCGCGC TTACT GCGCGGTGGG TTTCAGGAGTGTAGA TERM 2150 1580704 - 1580720 + T 71 -10.8 -2.64472 | opp_overlap 1580671 1580672, overlap 1580675 1580696 1580700 TCCGTGACTACCGCG CCGCGC TTACT GCGCGG TGGGTTTCAGGAGTG speG 1581270 - 1580710 - | spermidine N1-acetyltransferase TERM 2151 1580959 - 1580979 + g 77 -8.1 -4.21908 | ATCCATCGCCAGTTT GGCCGCGCG TGA CGCCAGGCC TTTTCCCTGGTACTC TERM 2152 1581078 - 1581120 + g 76 -9.4 -3.96624 | overlap 1581063 CGGCGTTTTCACCGT CGCATTCGACGA-CAAAGCG CCGTT CGCTTTGGTCGT-GGATGTG TTTGTCGTAGAGATC ynfB 1581647 - 1581306 - | hypothetical protein ynfA 1581800 - 1582126 + | hypothetical protein TERM 2153 1582134 - 1582166 + F 84 -8.3 -4.67755 | GTACGTAACATTGCC GCGCGACCAGAACAT TTT GTGATCTGGCAGCGC TTTTTACATCAATAT TERM 2154 1582780 - 1582770 - g 81 -8.2 -4.3739 | overlap 1582772 GAGCCCGCGACAAAA GGCC AGT GGCC GGAAGAACAATTGTG rspA 1582248 - 1583462 + | putative dehydratase rspB 1583473 - 1584492 + | putative dehydrogenase TERM 2155 1584726 - 1584767 + F 70 -2.1 -4.91852 | opp_overlap 1584750, overlap 1584707 1584725 CTTATTCTGGCAATG GGCACCTATGGTGCAGGTT ATAT AGCCAGAATTATCGGCGCC TTTGTTTTTGGTAAA TERM 2156 1585929 - 1585983 + F 100 -12.4 -4.99947 | gap 3, overlap 1585932 CAGACGAGTTAAATC GTG-TC-GACGGTATGGCCGGAA-CGC TAAT GCGGTTTCGGCCATGCTGTCCGGTCAC TTTTGTTTAATTAGC TERM 2157 1585932 - 1585979 + F 82 -12.9 -2.8949 | gap 2, overlap 1585929 ACGAGTTAAATCGTG TC-GACGGTATGGCCGGAA-CGC TAAT GCGGTTTCGGCCATGCTGTCCGG TCACTTTTGTTTAAT ydfI 1586069 - 1587535 + | putative mannitol dehydrogenase TERM 2158 1587571 - 1587545 - T 73 -10.8 -3.10901 | opp_overlap 1587560, overlap 1587543 1587547 AAATAGCGTAACAGA GACCCGGTAGCA TTA TGCTACCGGGAA GGCCGGAGCGGTTCT TERM 2159 1587569 - 1587547 - T 100 -17.8 -3.10513 | opp_overlap 1587560, overlap 1587545 1587543 ATAGCGTAACAGAGA CCCGGTAGCA TTA TGCTACCGGG AAGGCCGGAGCGGTT ydfZ 1587805 - 1587602 - | putative cytoplasmic protein ydfH 1588672 - 1587986 - | putative regulatory protein ydfG 1589548 - 1588802 - | 3-hydroxy acid dehydrogenase dcp 1589687 - 1591729 + | dipeptidyl carboxypeptidase II TERM 2160 1592230 - 1592212 - g 82 -5.2 -5.03145 | overlap 1592213 1592225 1592226 GAAGCGGGTAAAAAA GGTGGCCA AAA TAGCCACA GTGGTGGACGGAAAT STM1513 1592074 - 1592256 + | putative cytoplasmic protein TERM 2161 1592306 - 1592324 + T 100 -12.4 -5.88565 | opp_overlap 1592303 1592306 ATATTGCACATACGA TGCGGGCC ATA GGCTCGCA TTTTTTTATTCTGAC TERM 2162 1592324 - 1592306 - T 71 -10.2 -2.69977 | opp_overlap 1592306, overlap 1592303 ATATTGCACATACGA TGCGGGCC ATA GGCTCGCA TTTTTTTATTCTGAC ydeJ 1592903 - 1592376 - | competence damage-inducible protein A TERM 2163 1593432 - 1593411 - g 85 -2.1 -5.52384 | opp_overlap 1593426, overlap 1593414 GGGGGATTAAAAAAA GACGTGGCA CCGC CGCCGCCTC ATGCTATTGAGGATG ydeI 1593330 - 1593722 + | hypothetical protein TERM 2164 1593964 - 1593981 + T 100 -10.5 -6.38039 | opp_overlap 1593960 CCATGCAAGCATTTA CCGCTGG TGAA CCGGCGG TTTTTTTTTTGCCTG TERM 2165 1594045 - 1594011 - T 100 -16.5 -4.55287 | gap 1, opp_overlap 1594000 1593999, overlap 1594012 GCCATCCAGACAAAA GCGGCCCCTTGC-GCA ACGA TGCAGCAAGGGGCCGG CTCTGCGAGGGATTA TERM 2166 1594044 - 1594012 - T 100 -20 -3.3269 | gap 1, opp_overlap 1594000 1593999, overlap 1594011 CCATCCAGACAAAAG CGGCCCCTTGC-GCA ACGA TGCAGCAAGGGGCCG GCTCTGCGAGGGATT ydeE 1595601 - 1594414 - | putative MFS-type transporter YdeE TERM 2167 1594768 - 1594756 - G 79 -3.3 -5.24129 | CCCGGCGATAAAAAA GACGG TGC CGGTC GTCATCATTGGTCGA ydeD 1595829 - 1596731 + | O-acetylserine/cysteine export protein TERM 2168 1596843 - 1596825 - T 100 -12.4 -5.52986 | ACGGTACTAAAAAAA TGCCCCGC AAA ACGGGGCA AAGAGGTTAAAGGTG marB 1597065 - 1596850 - | hypothetical protein marA 1597477 - 1597094 - | DNA-binding transcriptional activator MarA marR 1597931 - 1597497 - | DNA-binding transcriptional repressor MarR marC 1598190 - 1598855 + | multiple drug resistance protein MarC TERM 2169 1598860 - 1598901 + T 77 -10.9 -3.20367 | opp_overlap 1598857 1598879, overlap 1598862 1598864 CGTACCACTAAGGCG CATTTTCGTCTGCCGGAAA CCTG TTCCCGGCAGACGAATGTC TTAATGCGGTTGTTC TERM 2170 1598862 - 1598899 + T 83 -13.5 -3.15841 | opp_overlap 1598857 1598879, overlap 1598860 1598864 TACCACTAAGGCGCA TTTTCGTCTGCCGGAAA CCTG TTCCCGGCAGACGAATG TCTTAATGCGGTTGT TERM 2171 1598864 - 1598897 + T 100 -18.3 -3.13639 | opp_overlap 1598857 1598879, overlap 1598862 1598860 CCACTAAGGCGCATT TTCGTCTGCCGGAAA CCTG TTCCCGGCAGACGAA TGTCTTAATGCGGTT ydeA 1600092 - 1598902 - | sugar efflux transporter TERM 2172 1599596 - 1599586 - G 74 -2.4 -5.0538 | GCCGATGGCAAAAAA GGTG GTG CGCC AGCCAAAATACTGAC yneJ 1601080 - 1600208 - | putative transcriptional regulator yneI 1601183 - 1602571 + | putative succinate-semialdehyde dehydrogenase yneH 1602644 - 1603570 + | glutaminase TERM 2173 1603604 - 1603625 + G 86 -10.1 -4.3467 | overlap 1603601 TCTTTGCCCGCCTGG CGCGATCGA CATT TCGTTCGCG TTTTCGTCTCGGGAT yneG 1603570 - 1603929 + | putative cytoplasmic protein STM1527 1604153 - 1605100 + | putative inner membrane protein STM1528 1605698 - 1605156 - | putative outer membrane protein TERM 2174 1607481 - 1607468 - g 70 -6.7 -4.11751 | ATCAATCTGCTAAAA GATGG CAAC CCATC GAATCCTAATACAGA STM1530 1606415 - 1607533 + | putative outer membrane protein TERM 2175 1607635 - 1607651 + T 100 -10.1 -5.49234 | TCTTTTATTATTTCA GGACGCT TCT GGCGTCC TTTTTTATTGACTAT STM1531 1608015 - 1607674 - | putative hydrogenase STM1532 1608915 - 1608028 - | putative dehydrogenase protein STM1533 1609964 - 1608903 - | putative hydrogenase STM1534 1610392 - 1609982 - | putative hydrogenase STM1535 1610688 - 1610389 - | putative hydrogenase protein STM1536 1611296 - 1610688 - | putative hydrogenase maturation protease STM1537 1612045 - 1611302 - | putative Ni/Fe hydrogenase 1 b-type cytochrome subunit TERM 2176 1611662 - 1611642 - GR 100 -7.6 -5.14563 | TTTTCGAGGAAAAAA TACCAGCG GATTT CGCTGATA ACGCCTTTGCGCCAG STM1538 1613798 - 1611996 - | putative hydrogenase-1 large subunit TERM 2177 1612995 - 1612979 - GR 70 -6.5 -4.1891 | opp_overlap 1612982 CGTCCGGAAGATAAA CCTGTTC GCA GAACTGG CGAGCTTTTTGGATG TERM 2178 1612982 - 1613000 + gr 72 -3.8 -4.68593 | opp_overlap 1612979 CCGGAAGATAAACCT GTTCGC AGAACTG GCGAGC TTTTTGGATGATGGA STM1539 1614904 - 1613801 - | putative hydrogenase-1 small subunit TERM 2179 1614458 - 1614469 + g 77 -7.2 -4.3208 | opp_overlap 1614446, overlap 1614447 AATCGCTTTAGCATC CGCG CTGA CGCG TTTTAACTTCTCCAG TERM 2180 1614678 - 1614664 - G 73 -5.7 -4.45517 | AAATGAGCGACAAAA TGGCA TCTTT TGCCA ACGGGTGCGCAGAGC TERM 2181 1615540 - 1615529 - g 91 -3.6 -5.61596 | overlap 1615530 AGTTTGATAAAAAAA CGCC GGAT GGCA GCCAGGGGATAAGCT TERM 2182 1615741 - 1615754 + G 71 -5.9 -4.33274 | opp_overlap 1615741 1615742, overlap 1615742 ACCTCGTTGGGAGAA TGGGC GCTG GCCCG TTTTGCTACTGTCGG TERM 2183 1615827 - 1615845 + G 76 -8.9 -3.922 | opp_overlap 1615794 AGAACTGCATCGGTT TGGCGAT CTGAA ATCGCCA TTTCATTACGCGTTT STM1540 1615333 - 1616424 + | putative hydrolase TERM 2184 1616929 - 1616910 - g 70 -5 -4.38712 | overlap 1616911 1616917 CTTAGCCGCACAAAA CGATAACG TTGA CGTCATCA ACCAAATAGAGGCGA STM1541 1616470 - 1617261 + | putative regulatory protein TERM 2185 1617305 - 1617278 - T 100 -17.1 -3.71848 | TTTGTCGATGAATAA CACCGCATGGC GGTCAT GCCATGCGGTG GAGCTTGCCGTAAAT STM1542 1618345 - 1617320 - | putative zinc-binding dehydrogenase TERM 2186 1617530 - 1617543 + gT 77 -8.1 -4.07678 | overlap 1617524 ATAGGTGATCAGGTT CGTCG GCAG CGACG TTTCCTGTTTTGGCC STM1543 1619606 - 1618320 - | putative transport protein TERM 2187 1619172 - 1619154 - GR 76 -11.6 -2.59668 | overlap 1619144 1619153 CAACAGGCCCACAAT CGGCCCGG ACA CCGCGCCG CCGAGCGGGGAACCG TERM 2188 1619619 - 1619647 + r 87 -9.8 -4.26634 | gap 1 CATGATTAATCCTCT TATTGTGGTCTAG CGGC CT-GACCACAATA TTTTAAGGTTATTTT TERM 2189 1619723 - 1619752 + r 74 -8.7 -3.94188 | TTTATCACAGGGGAT TTTTATCCATCGC AAGT GTGATGGATTAAA TTCTTTAAAATCAGT pqaA 1621339 - 1619783 - | PhoPQ-regulated protein TERM 2190 1620772 - 1620784 + g 84 -3.3 -5.32882 | GGGAAACGCTTTCGT CCTCT TTC AGTGG TTTTTTATCATCCTG TERM 2191 1621394 - 1621408 + r 76 -8.6 -4.06866 | GGGAACAATAATGTT TGTGAC GTT GTCACA TTATTCTGTTTCTGG STM1545 1622650 - 1621409 - | putative multidrug efflux protein TERM 2192 1622551 - 1622520 - G 74 -3 -4.96848 | gap 1, overlap 1622522 1622538 TCGCGGATATAAAAA GGCAGTACCGACA TTACAGC CG-CGGTACTGGC GGCGTAAAGGCCGAC STM1546 1624148 - 1622640 - | hypothetical protein TERM 2193 1624224 - 1624210 - g 100 -5 -5.54907 | opp_overlap 1624210 GTCAGAAAATAAAAA TGTGCA AGA TACACA TATTTCCGAGCAAAT STM1547 1624193 - 1624681 + | putative transcriptional regulator TERM 2194 1624714 - 1624693 - f 73 -2.1 -5.19998 | ATAAGCAAAAGAAAA GGGCGGTCA AATC CGATCGTCC AGGCTAATATCGGTA TERM 2195 1625031 - 1625061 + G 74 -7.8 -4.08216 | opp_overlap 1625031, overlap 1625059 ACTTTAGTAAATTAA CAGATTATATCA AAGAAGG TGATGTAATCTG TTTTAACGACAGTAC STM1548.s 1624874 - 1625953 + | putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase TERM 2196 1625991 - 1625960 - T 100 -12.6 -4.72497 | gap 1, opp_overlap 1625965, overlap 1625965 CAGGGATGAATAAAA TAAAACCGGTA-CAT ATA ATGCTACCGGTTTTA CCGAGAATAAGCATC TERM 2197 1625986 - 1625965 - T 100 -8.1 -5.28831 | gap 1, opp_overlap 1625965, overlap 1625960 ATGAATAAAATAAAA CCGGTA-CAT ATA ATGCTACCGG TTTTACCGAGAATAA TERM 2198 1625965 - 1625986 + T 76 -8.1 -4.08216 | gap 1, opp_overlap 1625965 1625960 ATGAATAAAATAAAA CCGGTA-CAT ATA ATGCTACCGG TTTTACCGAGAATAA STM1549 1626394 - 1626005 - | putative translation initiation inhibitor STM1550 1626849 - 1626565 - | putative cytoplasmic protein STM1551 1627087 - 1626839 - | putative cytoplasmic protein TERM 2199 1626955 - 1626943 - G 76 -9.1 -4.01853 | TAAGATGAGCATAAA GTGCC GGA GGCAC ACAGTAGAAAGCCGG TERM 2200 1627537 - 1627525 - g 72 -4.1 -4.81306 | overlap 1627526 TTTAAGAAAAAAGAA CTGAC ACC GTCAA CAGATTTGGATTCAG STM1551.1n 1627444 - 1627776 + | hypothetical protein STM1552 1627919 - 1628827 + | putative cytoplasmic protein TERM 2201 1629774 - 1629760 - T 72 -2.8 -5.0538 | opp_overlap 1629760 GTGTATGTCAAAAAA CTTCTG GCC CATAAG TTTGATCCCTTCCCT TERM 2202 1629894 - 1629878 - T 100 -10.1 -5.64274 | opp_overlap 1629878 GCAGGCATAAAAAAA CCGGCCA CTG TGACCGG TTCGTCGCGCAGGTT STM1554 1631871 - 1630405 - | putative coiled-coil protein TERM 2203 1632156 - 1632144 - g 77 -7.7 -4.31433 | CATGGCGACAATAAA GGATG TTG CATCC ATGGCCGGTGTATCA STM1555 1632130 - 1633137 + | putative transcriptional regulator STM1556 1633281 - 1634732 + | putative Na+/H+ antiporter TERM 2204 1634871 - 1634894 + G 76 -11.8 -3.05596 | gap 1 GATTTCGATTTTGCC TGCCCGCCTGA GGT TCAGGCGG-CA TTGCATCAGCGAATC STM1557 1634745 - 1635947 + | putative aminotransferase TERM 2205 1636034 - 1636018 - T 100 -10.8 -5.14965 | opp_overlap 1636018 AGCGCCAGTAAAAAA CCGGCC ATCAA GGCCGG TTGGGTCCGGAGCGC TERM 2206 1636018 - 1636034 + T 73 -10.8 -3.05384 | opp_overlap 1636018 AGCGCCAGTAAAAAA CCGGCC ATCAA GGCCGG TTGGGTCCGGAGCGC STM1558 1638135 - 1636060 - | putative glycosyl hydrolase STM1559 1640720 - 1638192 - | putative glycosyl hydrolase TERM 2207 1639861 - 1639879 + g 80 -4.5 -5.02074 | opp_overlap 1639860, overlap 1639863 CAGTCATCAGGAAGT TGCTCGC CTTTA GCGAGAA TTTTTTCCACGGTGA TERM 2208 1640029 - 1640041 + g 73 -5.5 -4.66537 | opp_overlap 1640018, overlap 1640030 ATCAGCCGATGTGTA TCGTC GAA GACGG TTTTATCTTCCACCC TERM 2209 1640359 - 1640338 - G 77 -3.5 -5.00616 | overlap 1640342 GTGTCGCCTAAAAAA GGCAGCGTC AGTC GGCGCGACC AGTCAATATCGAAAT TERM 2210 1640416 - 1640427 + g 74 -7.2 -4.07885 | opp_overlap 1640408 TATTCAAGCACGTCG CGCC ACCA GGCG TTTTCCAGCGAGCTG STM1560 1642501 - 1640717 - | putative alpha amylase TERM 2211 1641205 - 1641178 - G 100 -7 -5.77853 | AATCGGTAAAAAAAA GAAAAGGACGGC TTTC GCCATACTCTTC GCCCATAAAAAGCAG STM1561 1643415 - 1642630 - | putative lipoprotein TERM 2212 1643029 - 1643046 + g 95 -6.3 -5.31275 | gap 1, overlap 1643032 GGATTTCACCTCGTA CTGGTGGC TGT GCCAC-AG TTTTTTCTCCTCGGG TERM 2213 1643538 - 1643521 - R 75 -6.2 -4.53036 | opp_overlap 1643513 1643521, overlap 1643516 TCACAAATAGTAAAA CCCGAC ACACAG GCCGGG TTTTGATATCAGTTT hdeB 1643887 - 1643558 - | acid-resistance protein TERM 2214 1644123 - 1644103 - R 83 -13.3 -3.27951 | overlap 1644087 1644101 TAGGCCACGACAATA GCCGCAGAC GTG GTCTACGGC GCGTTGAGGTGATAG osmC 1644668 - 1644237 - | putative envelope protein yddX 1645181 - 1645396 + | biofilm-dependent modulation protein rpsV 1645491 - 1645634 + | 30S ribosomal subunit S22 TERM 2215 1645682 - 1645661 - f 90 -13.1 -3.65353 | opp_overlap 1645661, overlap 1645651 TGAAATGACGTTAAA CACCATTGC ATCT GCAATGGTG TTTTTGTTTATAGGA TERM 2216 1645661 - 1645682 + F 100 -13.1 -5.38054 | opp_overlap 1645651 1645661 TGAAATGACGTTAAA CACCATTGC ATCT GCAATGGTG TTTTTGTTTATAGGA TERM 2217 1646791 - 1646804 + G 74 -2.3 -4.99861 | opp_overlap 1646788 TTTAAGCGAAGATGC CGCTC GACA GAACG TTTTTATGGTTGATC sfcA 1645811 - 1647508 + | malate dehydrogenase TERM 2218 1647513 - 1647538 + F 74 -11.1 -2.82317 | opp_overlap 1647511, overlap 1647511 CTTCCATTTAATACG TACCCGGCGGT GAAT GCCGCCGGATA TCACTTTCTTCTTTA TERM 2219 1647953 - 1647928 - g 75 -6.1 -4.64766 | TCTACACGTGAAAAA CGGCGATTTCG GTGA CAAAACCGGCG TTATTCTGGGACACG TERM 2220 1648027 - 1648045 + G 85 -8.8 -4.37886 | opp_overlap 1648019 1648020, overlap 1648028 GCTGAAACCCGGCGA TCGCGCGA GTG TCGCGTGG TTTTATGAAGGATGC TERM 2221 1648490 - 1648470 - g 79 -3.2 -5.14563 | gap 1, opp_overlap 1648470 TTGTGCAGGAAAAAA CCGGTGGCG CGCA CGC-AGCGG TGGTTACCGCGGTCG adhP 1647794 - 1648804 + | alcohol dehydrogenase TERM 2222 1648881 - 1648843 - T 87 -14.9 -2.91511 | gap 1, opp_overlap 1648849 1648852, overlap 1648849 TATACAGACAGCAGA TGA-AAACAAGGCGCTAC CAGG ATAGCGCCTTGTTTATCA GATTGCGAAAGAATT TERM 2223 1648874 - 1648849 - T 100 -14.1 -4.38171 | opp_overlap 1648849 1648852, overlap 1648843 GACAGCAGATGAAAA CAAGGCGCTAC CAGG ATAGCGCCTTG TTTATCAGATTGCGA TERM 2224 1648849 - 1648874 + T 95 -13.4 -3.92522 | opp_overlap 1648849 1648843, overlap 1648852 GACAGCAGATGAAAA CAAGGCGCTA CCAGGA TAGCGCCTTG TTTATCAGATTGCGA TERM 2225 1648852 - 1648871 + T 79 -9.3 -4.08948 | opp_overlap 1648849 1648843, overlap 1648849 AGCAGATGAAAACAA GGCGCTA CCAGGA TAGCGCC TTGTTTATCAGATTG fdnI 1649551 - 1648895 - | formate dehydrogenase-N subunit gamma fdnH 1650428 - 1649544 - | formate dehydrogenase-N beta subunit TERM 2226 1649626 - 1649666 + g 77 -11.2 -3.55801 | gap 1, opp_overlap 1649626 1649617 1649637, overlap 1649639 ATCAGACCGGCGAAA GTGGCGATAAAGCCCGCTG CGGC CAGCGG-TTTTAGCGCCCC TTTCCACAGATTGAT TERM 2227 1649639 - 1649654 + g 86 -10.4 -4.0896 | opp_overlap 1649637 1649626 1649617, overlap 1649626 AAGTGGCGATAAAGC CCGCTG CGGC CAGCGG TTTTAGCGCCCCTTT TERM 2228 1650350 - 1650384 + g 74 -7.9 -4.15222 | gap 1, opp_overlap 1650358, overlap 1650351 TCGCGACTTCGGCTT TGTAATCACG-CGCCT GCGG AGGCGGCGTGATGGCG TTTGTTGCGGACCGT fdnG 1653489 - 1650442 - | formate dehydorgenase-N alpha subunit yddG 1653767 - 1654648 + | hypothetical protein TERM 2229 1655716 - 1655703 - g 71 -4.5 -4.63527 | gap 1, overlap 1655704 1655707 GTACCAGGGCAAAAA CGACCG TGA CGG-CG CGTACGAGTCTAACG nmpC 1655173 - 1656261 + | putative outer membrane porin precursor TERM 2230 1656285 - 1656305 + F 100 -13.3 -5.13344 | opp_overlap 1656285 TAGTCTGAATACAAA GCCAGTCCT TTC AGGGCTGGC TTTTTCTCTTGATGT TERM 2231 1656305 - 1656285 - f 91 -11.1 -4.19624 | opp_overlap 1656285 TAGTCTGAATACAAA GCCAGTCCT TTC AGGGCTGGC TTTTTCTCTTGATGT STM1573.Sc 1656345 - 1656785 + | putative cytoplasmic protein smvA 1658297 - 1656810 - | methyl viologen resistance TERM 2232 1657129 - 1657145 + g 93 -9.3 -4.82901 | GCCATCGTTTCTATC GCGCCGG CCG CCGCCGC TTTTTCTGCCGGCGC STM1575 1658415 - 1658993 + | putative transcriptional regulator TERM 2233 1659156 - 1659142 - f 73 -7.8 -4.12599 | opp_overlap 1659140 1659142 1659150 AATAAGTTCTCAAAA GAGCGC GTG ACGCTC TGTCTCTTTTTTGTG TERM 2234 1660388 - 1660421 + G 73 -5.1 -4.54449 | gap 1, overlap 1660389 ATGAGCAGGCGCAGC GCGA-AGCGGTGACGG ATA CCGCCGCCGCGCTCGG TTTTATCTCCGCTAT narU 1659208 - 1660596 + | nitrate extrusion protein TERM 2235 1660974 - 1660955 - g 100 -16.4 -3.2827 | TTACCGAACCATGAA CCGCGCGG CTGC CCGCGCGG CGCCAGCTACTCCTG TERM 2236 1661194 - 1661180 - g 74 -10 -3.66178 | opp_overlap 1661182 CGTTCGAACTGGAAA GAGCTG AAT CAGCTC ATTGCCGCCGCTAAC narZ 1660688 - 1664428 + | nitrate reductase 2 alpha subunit TERM 2237 1664522 - 1664508 - g 73 -5.6 -4.59773 | CGTCACCTGTAAAAA CGTCTG GAC CGGACG TGAAGGGATGGAATA TERM 2238 1664601 - 1664589 - g 71 -4.8 -4.62069 | CGGCTATCCCAAAAA CTGG GAGGA CCAG CAGGAGTGGCAAGGC TERM 2239 1665391 - 1665381 - g 70 -6.8 -4.09864 | overlap 1665382 AGGCATCCCGCAAAA CGTC ATC GACG CCGCCCAACGGTCGC narY 1664425 - 1665969 + | nitrate reductase 2 beta subunit narW 1665969 - 1666664 + | nitrate reductase 2 delta subunit narV 1666661 - 1667341 + | nitrate reductase 2 gamma subunit TERM 2240 1667415 - 1667382 - f 100 -8.7 -5.27335 | opp_overlap 1667383, overlap 1667383 CCGGGCAAAGAAAAA CGCCTGGGCGTCGTC ATTC GGCAACGCACAGGCT ATGATGATTCTTCAG TERM 2241 1667414 - 1667383 - f 93 -12.2 -3.75678 | opp_overlap 1667383, overlap 1667382 CGGGCAAAGAAAAAC GCCTGGGCGTCGTC ATTC GGCAACGCACAGGC TATGATGATTCTTCA TERM 2242 1667383 - 1667414 + F 79 -12.2 -2.89421 | opp_overlap 1667383 1667382 CGGGCAAAGAAAAAC GCCTGGGCGTCGTC ATTC GGCAACGCACAGGC TATGATGATTCTTCA TERM 2243 1668021 - 1668031 + G 90 -4.6 -5.37593 | opp_overlap 1668009 TCAGCCAGCAAATTG GCTG TAA CGGC TTTTTTCCTTTCCAG yddE 1667447 - 1668340 + | hypothetical protein nhoA 1669221 - 1668376 - | putative arylamine N-acetyltransferase TERM 2244 1669351 - 1669337 - R 78 -5.7 -4.79949 | overlap 1669341 1669342 TTTTGAAAAAAATAA GACAG GCCGG CTGTC GCGCCGGAGGTACGT TERM 2245 1669410 - 1669444 + r 82 -7.8 -4.56775 | opp_overlap 1669431 1669432, overlap 1669418 GTTCTGAGAATCTCT TTGCGACACGCCGCCA AAA TAGCGGCGTGTTAAAA TTTTTAACGCCGGCT TERM 2246 1669418 - 1669436 + r 74 -10.2 -3.17553 | opp_overlap 1669431 1669432, overlap 1669410 AATCTCTTTGCGACA CGCCGCCA AAA TAGCGGCG TGTTAAAATTTTTAA STM1583 1670137 - 1669505 - | putative cytoplasmic protein ansP 1670649 - 1672142 + | L-asparagine transport protein TERM 2247 1672154 - 1672177 + T 100 -14.6 -3.74747 | gap 1 ATAACATTCCCCTTC CCCGGCA-GCC CCA GGCCTGCCGGG TTTAATGCGCGTTGC STM1585 1672440 - 1672219 - | putative outer membrane lipoprotein STM1586 1673646 - 1672585 - | putative periplasmic protein TERM 2248 1673622 - 1673609 - G 71 -5.9 -4.33582 | overlap 1673612 CCTAACAATAAAGAA CCACG CAGG CGCGG CGAAAAAAGATGACG TERM 2249 1674599 - 1674584 - g 82 -5.4 -5.00616 | overlap 1674586 CGGCGCGCGAAAAAA TCTGGC TAAT GCCAAA CTGGGCGTGCGCCTT TERM 2250 1674898 - 1674885 - g 81 -8.1 -4.2349 | GTGGCACAGCTAAAA CCAGC CCAG GCTGG CGGCGTAATTACACT TERM 2251 1675564 - 1675550 - g 77 -4.2 -4.88736 | overlap 1675551 1675561 1675562 CACTACCTACAAAAA CGCG GGCAAAA CGCG CCGCCAGGGCGCAGA TERM 2252 1675577 - 1675561 - g 74 -7.2 -4.10855 | overlap 1675550 1675551 1675562 AAAACGCGGGCAAAA CGCGCC GCCAG GGCGCA GAACTTGCGTTGGAC yncD 1673910 - 1676030 + | putative outer membrane receptor TERM 2253 1676053 - 1676071 + T 90 -14.6 -3.19642 | opp_overlap 1676045 1676043 1676055 GCAAATATCCGGCAA TAGCGGGG AAT CCCCGCTA TTGATAAGTCATAGT TERM 2254 1676069 - 1676055 - T 80 -12.8 -3.04515 | opp_overlap 1676053, overlap 1676045 1676043 AAATATCCGGCAATA GCGGGG AAT CCCCGC TATTGATAAGTCATA yncC 1676762 - 1676097 - | putative DNA-binding transcriptional regulator TERM 2255 1676129 - 1676145 + g 71 -9.5 -3.48924 | TTTTAATCGTCGCTA CGTTTTG TTG CAAAACG TTCTGTAGGCAGTGG TERM 2256 1677069 - 1677087 + r 100 -8.8 -5.63517 | ATTTGCACATTTTTA TGGCGACA TAA TGCCGCCA TTTTTTCTTTACGCA yncB 1678166 - 1677096 - | putative NADP-dependent oxidoreductase yncA 1678345 - 1678860 + | putative acyltransferase TERM 2257 1679080 - 1679102 + G 100 -6.3 -5.56264 | gap 1, overlap 1679084 TTCGCTGGTGGACAT TGATCCCCGG TCTG CTGGGG-TCA TTTTTTGTATTTGCC TERM 2258 1679275 - 1679303 + G 74 -6.6 -4.30978 | overlap 1679276 CGCTGTTGCTGGTCA TTGGCGCATGGC TGATT GCGAAGCGCCAG TTTTAATGGGTTACA ydcZ 1678860 - 1679309 + | putative inner membrane protein ydcY 1679547 - 1679314 - | putative cytoplasmic protein TERM 2259 1680312 - 1680298 - g 73 -5.6 -4.64676 | opp_overlap 1680298 1680297 GGAGCCCGAAGAAAA GCCGCT GGT AGAGGC GGCATTTAGTCAGGC TERM 2260 1680506 - 1680516 + G 78 -2.4 -5.252 | overlap 1680490 GTGGTTATCGCCGCC GTCG CCA CGCC TTTTTTCTGGCCATC srfA 1679771 - 1681090 + | putative virulence protein TERM 2261 1681634 - 1681652 + G 74 -6.6 -4.23213 | CCAGACATGGATTGA CGGCTGGC TGC GCGAGTCG TTTCTTCAGTATGCC TERM 2262 1683877 - 1683862 - g 70 -6.8 -4.11484 | CCGAACTGGCGAAAA CCATCG CTGG CGACGG CGTACTGAATGTGCG srfB 1681095 - 1684076 + | putative virulence protein TERM 2263 1684815 - 1684803 - g 86 -10.5 -4.16284 | ATATGTTGCAACAAA CCGGC CAT GCCGG GGAACTGGCGGCGCC TERM 2264 1684943 - 1684967 + G 73 -9.2 -3.82098 | opp_overlap 1684943 CATCCGGTTAAGGAA GGCCGACTGC TCAAT GCGGTCAGCC TTTCGCTTGATTCTC srfC 1684073 - 1686217 + | putative virulence protein TERM 2265 1686259 - 1686231 - T 72 -5.2 -4.57073 | overlap 1686232 1686235 GACCTGGCGGAAAAA CCATGCCCGGTA ACCTG TATCGGGCTTGA GGTCAGAAAAGCGAA ydcX 1686525 - 1686262 - | putative inner membrane protein TERM 2266 1686470 - 1686482 + g 79 -3.3 -5.27335 | CAGAGGAAAAAACGC GCGCA ATA TGCTC TTTTTATTTGACGCA TERM 2267 1686751 - 1686799 + r 100 -8.8 -5.08011 | gap 1, overlap 1686754 1686755 CAACCTTTGAGTACT TGCTGCGCATGTTGGCGGGGAGG TCCC CCTCTCCGCCGACACCCGCC-TA TTTTTTCACGATTTT TERM 2268 1686754 - 1686797 + r 100 -15.2 -4.15235 | overlap 1686751 1686755 CCTTTGAGTACTTGC TGCGCATGTTGGCGGGGAGG TCCC CCTCTCCGCCGACACCCGCC TATTTTTTCACGATT TERM 2269 1686755 - 1686796 + r 100 -18.7 -3.08056 | overlap 1686754 1686751 CTTTGAGTACTTGCT GCGCATGTTGGCGGGGAGG TCCC CCTCTCCGCCGACACCCGC CTATTTTTTCACGAT ydcW 1688258 - 1686834 - | gamma-aminobutyraldehyde dehydrogenase ydcR 1689818 - 1688394 - | putative regulatory protein pdgL 1690724 - 1689954 - | periplasmic dipeptidase precursor TERM 2270 1690350 - 1690362 + g 77 -4.1 -5.05577 | ATTTTTCTCTACCTG CGGAT AAA ATTCG TTTTTCATTTGGTTT ugtL 1691644 - 1691246 - | hypothetical protein TERM 2271 1692091 - 1692076 - H 76 -4 -5.05505 | gap 1, overlap 1692079 AGGACAAAGCAAAAA TCAGGTG TTT CACC-GA TAGGCAAACCGATGG sifB 1692181 - 1693131 + | secreted effector protein yncJ 1693405 - 1693635 + | putative periplasmic protein ydcP 1695600 - 1693636 - | putative collagenase TERM 2272 1695541 - 1695531 - G 70 -6.8 -4.18018 | CTGCGCCATGCAAAA TCGC TTC GCGA GCAATTGCGGCGTCA ydcN 1696215 - 1695679 - | putative repressor TERM 2273 1696996 - 1696986 - g 77 -8.2 -4.14243 | GATGGCATCGCAAAA CGCC CCC GGCG TCGCCACAATGAAGG TERM 2274 1697078 - 1697089 + G 79 -7.2 -4.42974 | overlap 1697063 TGGCGCTGCTGCTTT CGCC ATTT GGCG TTTATTCTATCTGCA TERM 2275 1697181 - 1697191 + G 100 -8.2 -5.72053 | opp_overlap 1697135, overlap 1697169 CTGGTTAGCGGCCGC CGCC GCA GGCG TTTTTTATTTACTTG STM1606 1696306 - 1697484 + | putative benzoate membrane transport protein STM1607 1698206 - 1697538 - | putative outer membrane lipoprotein TERM 2276 1698156 - 1698117 - G 87 -13.6 -3.30629 | overlap 1698115 1698118 TAAGAATCCAGAATA CTTATCCGGCTGTGTGAC TTTA GACGCACAGCCGGATAAC GCCAGCAAGCCAGTA TERM 2277 1698155 - 1698118 - G 90 -17.1 -2.57654 | overlap 1698117 1698115 AAGAATCCAGAATAC TTATCCGGCTGTGTGAC TTTA GACGCACAGCCGGATAA CGCCAGCAAGCCAGT tehB 1698958 - 1698362 - | tellurite resistance protein TehB tehA 1699958 - 1698945 - | potassium-tellurite ethidium and proflavin transporter TERM 2278 1699182 - 1699171 - G 72 -2.2 -4.86621 | ACGCCGAACGAAAAA CTCC AGAA GGAA GCATTAAACGGTTGT TERM 2279 1699946 - 1699957 + g 74 -2.2 -5.06223 | overlap 1699916 CGCGATCGCTCTGCT TGTG ATTA CGCA TTTTGTTTAATTTAT TERM 2280 1700196 - 1700182 - g 79 -11.4 -3.63895 | opp_overlap 1700191 1700192 TTTAACGATGTTAAA GCCGGA ACC TCCGGC GGCTGGGTTGATGCC ydcK 1700065 - 1701045 + | putative nucleoside-diphosphate-sugar pyrophosphorylase rimL 1701581 - 1701042 - | ribosomal-protein-L7/L12-serine acetyltransferase STM1612 1701798 - 1702916 + | putative cellulase protein TERM 2281 1702997 - 1702979 - g 74 -3 -4.86001 | overlap 1702981 ATGATTGCACAAAAA CTGCAGGA CTT TCTTGCGG AGCAAGGCATTGCGG STM1613 1702913 - 1703194 + | putative PTS system enzymeIIB component TERM 2282 1704199 - 1704209 + G 90 -4.6 -5.38047 | CGCTGGCTGATTTAC CGGT TGC GCCG TTTTTTATCTGCATG STM1614 1703205 - 1704518 + | putative PTS system enzyme IIC component TERM 2283 1705278 - 1705261 - g 80 -4.7 -5.03715 | opp_overlap 1705261, overlap 1705263 1705264 ACCACGTTTAAAAAA GACGGCG TCTT CGCCAAC TTTGTCGACCAGGCG STM1615 1704532 - 1705338 + | putative nucleoside triphosphatase TERM 2284 1705367 - 1705341 - f 100 -11.6 -4.78237 | overlap 1705342 TATCCGACAATAAAA TGGGGATAAGCA AAA CGCTTATCCCCT GCAGAGAGCGATAAC TERM 2285 1705366 - 1705342 - f 100 -15.1 -3.46219 | overlap 1705341 ATCCGACAATAAAAT GGGGATAAGCA AAA CGCTTATCCCC TGCAGAGAGCGATAA STM1616 1705470 - 1705907 + | putative sugar-specific PTS enzyme II STM1617 1705919 - 1706551 + | ribulose-phosphate 3-epimerase TERM 2286 1706944 - 1706930 - g 83 -7.2 -4.55798 | GACGCCAAAGTAAAA GTCATT TGC AATGAC ATCAAAATCGCTAAT STM1618 1706567 - 1707358 + | putative transcriptional repressor of sgc operon STM1619 1707358 - 1707795 + | cryptic aminoglycoside resistance gene TERM 2287 1707815 - 1707835 + T 100 -15.5 -4.23674 | opp_overlap 1707815 AATCATACAGGAAAA GGTCGGGTA TAG TACCCGACC TTTATATTACTGGGG TERM 2288 1707835 - 1707815 - T 100 -15.5 -4.4084 | opp_overlap 1707815 AATCATACAGGAAAA GGTCGGGTA TAG TACCCGACC TTTATATTACTGGGG STM1620 1709044 - 1707842 - | putative oxidase STM1621 1709631 - 1709056 - | putative periplasmic protein mdoD 1711482 - 1709827 - | glucan biosynthesis protein D TERM 2289 1711370 - 1711352 - G 72 -3.8 -4.70319 | CCAGCAAAATCAAAA CGGACAAT TTT ACCATCCG CAATATCGGATTCCG STM1623 1713210 - 1711702 - | putative carboxylesterase TERM 2290 1712217 - 1712234 + g 78 -2.5 -5.22039 | opp_overlap 1712193 1712219, overlap 1712218 1712219 TTAACCCCAGGCCAA CACGCCG CTCA CGGCGCA TTTTTTGAATTTGAC TERM 2291 1712492 - 1712502 + g 81 -2.4 -5.40072 | opp_overlap 1712484 CCAAGATGTTCCGCC AGCG CAA CGCC TTTTTTTAGCGCCAC STM1624 1714602 - 1713259 - | putative cytoplasmic protein TERM 2292 1714157 - 1714143 - G 73 -5 -4.66163 | opp_overlap 1714119, overlap 1714120 AGCGCGATGTAAAAA TATCAC GCT GCGATA AGATTTCCGCCGCCC TERM 2293 1715298 - 1715279 - g 75 -3.5 -4.89233 | overlap 1715280 CATCAACAGCAAAAA TCGACCT CGTTAC AGGTCGC GACCATGAACAATAC TERM 2294 1715531 - 1715516 - g 77 -8.2 -4.07568 | GTCGTCTCGCCAAAA GGCACG GTAC CGCGCC AGAATGCGGAAGCCC ydcI 1714895 - 1715818 + | putative transcriptional regulator TERM 2295 1715871 - 1715840 - T 100 -16.6 -4.30719 | gap 1, opp_overlap 1715836, overlap 1715859 CTGTCGGAGAATAAA CGCGCCCGC-GGCTA AAA TAGCCCGCTGGCGCG ACGCTTACTAAAGGA trg 1717504 - 1715879 - | methyl-accepting chemotaxis protein III TERM 2296 1717667 - 1717643 - R 100 -15.7 -4.5538 | opp_overlap 1717638, overlap 1717644 1717657 AGAAAATTCAGAAAA GCGCCAGCGGA AAA TCCGCTGGCGG ATGAATCAGTTATCG TERM 2297 1717666 - 1717644 - R 100 -19.2 -3.31601 | opp_overlap 1717638, overlap 1717643 1717657 GAAAATTCAGAAAAG CGCCAGCGGA AAA TCCGCTGGCG GATGAATCAGTTATC STM1627 1718791 - 1717673 - | alcohol dehydrogenase class III TERM 2298 1718234 - 1718218 - G 80 -4.3 -4.98531 | opp_overlap 1718233, overlap 1718219 CGCCTAAACCAAAAA CGGCAAC GGT GTCGCCC GCTTTCACTTTAGCG STM1628 1719098 - 1718823 - | putative cytoplasmic protein TERM 2299 1719554 - 1719536 - R 75 -3.2 -5.25803 | AATGTGGACAAAAAA TCAAATGA GCG TTATTTGA AAGATTTTTAATACC STM1630 1720867 - 1720151 - | putative inner membrane protein TERM 2300 1721023 - 1721033 + H 75 -3.2 -5.18561 | AGCACACTAAAATCA GGAG TGG CTTC TTTTTTAGATCTTTG TERM 2301 1721377 - 1721362 - g 70 -5.4 -4.42788 | TTTAATGCGATAAAA GAAAGC GCAC GCCTTC CGGAATTAAGTTTAT TERM 2302 1721718 - 1721730 + G 84 -6.3 -5.00616 | TTCTTTGGGTGATAT TACCA GAC TGGTA TTTTTTGGCGACAGC TERM 2303 1721992 - 1722012 + G 77 -3.9 -5.06816 | overlap 1721994 GCATCTTACACCCCT TCTCACCAG GAC CTGGCGATA TTTTTATTGGGGGCT TERM 2304 1721994 - 1722010 + G 70 -6.5 -4.16307 | overlap 1721992 ATCTTACACCCCTTC TCACCAG GAC CTGGCGA TATTTTTATTGGGGG sseJ 1721293 - 1722519 + | secreted effector protein STM1632 1722984 - 1722640 - | putative inner membrane protein TERM 2305 1724449 - 1724470 + G 86 -7.3 -4.72188 | AATGGCAATCTTGAT CTGGCTTTT ATAG AAGAGCCGG TTTATTTTACCTTCA STM1633 1723891 - 1724652 + | putative periplasmic binding protein STM1634 1724659 - 1725306 + | putative ABC transporter permease component STM1635 1725331 - 1726062 + | putative ABC-type polar amino acid transport system ATPase component STM1636 1726059 - 1726739 + | putative ABC-type transport system membrane component TERM 2306 1727310 - 1727297 - g 71 -5.9 -4.23615 | opp_overlap 1727297 ATTACAGTCAAGAAA CGCGC ATGT ACGCG TTAATGGGAATGCTA STM1637 1726876 - 1728426 + | putative inner membrane protein TERM 2307 1729507 - 1729522 + G 70 -6.8 -4.08767 | opp_overlap 1729505, overlap 1729509 GACTTTGGAGCAACA TGGCGC CGTT GCGCTA TTTTCCGCCACTACG STM1638 1729115 - 1729552 + | putative SAM-dependent methyltransferase TERM 2308 1729698 - 1729731 + T 78 -6.7 -4.61199 | AGACCCGTCCTCCTT CGCCTGCGTCA CGGGTCCTGGTT AGACGCAGGCG TTTTCTGTATGGAAT cybB 1730353 - 1729823 - | cytochrome b561 TERM 2309 1730439 - 1730466 + r 78 -6.2 -4.62069 | overlap 1730441 AAATGGTGGTCGCAC TTGCCCGTTCAC CCTC GCAAACGGGCGA TTTTTAGCGTAAAGC ydcF 1731270 - 1730470 - | putative inner membrane protein hrpA 1735179 - 1731334 - | ATP-dependent RNA helicase HrpA TERM 2310 1735490 - 1735507 + G 75 -6.3 -4.63932 | overlap 1735492 AGGGTACTCTCAGTC TGGTCAG TTGA CTGACTA TTTTATTGAACAATG acpD 1735437 - 1736042 + | azoreductase TERM 2311 1736048 - 1736075 + T 72 -8.4 -3.80019 | overlap 1736049 1736052 1736068 GGCCGCTTAAATATT TTTGCCTCCCGT TTCG ACGGGAGGTGAC TTCTTAGGTTTGTAG TERM 2312 1736049 - 1736074 + T 77 -11.9 -2.87289 | overlap 1736048 1736052 1736068 GCCGCTTAAATATTT TTGCCTCCCGT TTCG ACGGGAGGTGA CTTCTTAGGTTTGTA TERM 2313 1736052 - 1736071 + T 83 -13.6 -2.67717 | overlap 1736049 1736048 1736068 GCTTAAATATTTTTG CCTCCCGT TTCG ACGGGAGG TGACTTCTTAGGTTT STM1643 1736488 - 1736039 - | putative inner membrane protein ydbL 1736954 - 1736631 - | putative periplasmic protein TERM 2314 1736936 - 1736946 + g 75 -4 -4.93365 | GCGTCAGCACCCATA GTAT TAA ATAC TTTTTCATTATGGCC ynbE 1737153 - 1736962 - | putative outer membrane lipoprotein ydbH 1739789 - 1737153 - | hypothetical protein TERM 2315 1737193 - 1737207 + g 71 -4.2 -4.63486 | overlap 1737195 TTCCGGCAAGGAGGT TGCGGC AAC GCTGTA TTTTGTTCAAGCCAT TERM 2316 1737254 - 1737244 - G 70 -6.8 -4.0896 | overlap 1737250 1737251 AAATTGTCGCCAAAA CGCA AAC TGCG CCACAGCGTAAACAC TERM 2317 1737889 - 1737901 + g 72 -4.1 -4.77165 | overlap 1737884 AATGGCAGAATGAAA TCGAC GCC GTTGA TTTTGTTATCAGGCA TERM 2318 1737921 - 1737932 + g 74 -7.2 -4.07885 | GTTATCAGGCATCCA GGCG CTGC CGCC TTTTAACACGCCGTG TERM 2319 1740155 - 1740141 - g 70 -5.6 -4.4715 | overlap 1740142 TGCTAACCGAGAAAA CGGCGA AAA CCGCCA ATGGATGTGAAGCAG TERM 2320 1740252 - 1740227 - g 74 -2.4 -5.09173 | opp_overlap 1740231, overlap 1740241 GAAGAGCTGAAAAAA CACGGCGTGA AATACA TCGCGCTGCG TTGCGCCGGATTTAA ldhA 1740029 - 1741018 + | D-lactate dehydrogenase TERM 2321 1741025 - 1741048 + F 95 -12.4 -4.13767 | overlap 1741026 CTGTTCTAATCCTGT CGCTCCCCTG CGCT CAGGGGAGCA TTTTCGGATAACCCC TERM 2322 1741026 - 1741047 + F 93 -15.9 -3.08046 | overlap 1741025 TGTTCTAATCCTGTC GCTCCCCTG CGCT CAGGGGAGC ATTTTCGGATAACCC hslJ 1741129 - 1741539 + | heat-inducible protein STM1649 1741738 - 1741583 - | putative cytoplasmic protein STM1650 1741765 - 1742064 + | hypothetical protein TERM 2323 1743122 - 1743108 - g 75 -11.4 -3.4582 | opp_overlap 1743119, overlap 1743106 GGATCGCACCAAAGA GCCTGG CGC CCAGGC CGAGCCGCTTTATCT nifJ 1742125 - 1745649 + | putative pyruvate-flavodoxin oxidoreductase TERM 2324 1745685 - 1745704 + F 93 -13.6 -3.50047 | opp_overlap 1745685, overlap 1745678 CTGGAAACAAAAAAA GCCCGAAC ATCC GTTCGGGC TTGTCAATTTATACG TERM 2325 1745704 - 1745685 - f 100 -13.6 -5.95539 | opp_overlap 1745685 1745678 CTGGAAACAAAAAAA GCCCGAAC ATCC GTTCGGGC TTGTCAATTTATACG ynaF 1746131 - 1746565 + | putative universal stress protein STM1653 1746953 - 1746615 - | putative membrane transporter of cations ydaO 1747309 - 1748244 + | C32 tRNA thiolase TERM 2326 1748284 - 1748245 - T 80 -10 -4.01381 | gap 1, opp_overlap 1748245 1748250, overlap 1748246 ATCGAAGTGAAATAA TCTGCA-GGCGTCTCAGCA CTC CGCTGAGACGCCATGCTAT CGATCATTTTAATAG TERM 2327 1748283 - 1748246 - T 82 -13.5 -3.00106 | gap 1, opp_overlap 1748245 1748250, overlap 1748245 TCGAAGTGAAATAAT CTGCA-GGCGTCTCAGCA CTC CGCTGAGACGCCATGCTA TCGATCATTTTAATA TERM 2328 1748250 - 1748278 + T 86 -14.6 -2.66008 | opp_overlap 1748246 1748245, overlap 1748245 AGTGAAATAATCTGC AGGCGTCTCAGC ACTCC GCTGAGACGCCA TGCTATCGATCATTT dbpA 1749661 - 1748288 - | ATP-dependent RNA helicase DbpA TERM 2329 1748385 - 1748409 + g 83 -10.1 -4.13014 | opp_overlap 1748389, overlap 1748389 TGACGTACGGCGACG TAAACGTGCAT TGG ATGCACGTTAA TTTTGCCAATATCCG TERM 2330 1748405 - 1748389 - G 76 -10.9 -3.65351 | opp_overlap 1748389 1748385 GTACGGCGACGTAAA CGTGCAT TGG ATGCACG TTAATTTTGCCAATA TERM 2331 1748389 - 1748405 + g 76 -10.9 -3.67622 | opp_overlap 1748389, overlap 1748385 GTACGGCGACGTAAA CGTGCAT TGG ATGCACG TTAATTTTGCCAATA TERM 2332 1748851 - 1748862 + g 71 -7.2 -3.96327 | overlap 1748842 CCAGATCGCCGTGGA GCGC CAAC GCGC TTTGTCCTACCGCAT TERM 2333 1749562 - 1749540 - G 75 -12.8 -2.65815 | TGCACACGCACATCA TTACCCGCCA GAA TGACGGGTAA TGCTGCGGCCTGAAC TERM 2334 1749625 - 1749596 - G 91 -15.1 -3.08813 | CGTCATCTCAAGATA GCCCAGCTCAGTA AGGT TATTGAGCTGGGC GGCGGGCAAAACATT TERM 2335 1749958 - 1749939 - R 100 -9.3 -5.83822 | TACAGGCAAAAAAAA GCCGACT AATCTA AGTCGGC GTCGTACGAATCAAT zntB 1751131 - 1750148 - | zinc transporter TERM 2336 1751259 - 1751241 - R 88 -7.4 -5.03145 | overlap 1751253 GAACGTGCGAAAAAA GCGCCT TAGCAAC AGGCGC TTACCAAACATGTAT STM1657 1752431 - 1751277 - | putative methyl-accepting chemotaxis protein ydaL 1753405 - 1752842 - | hypothetical protein ogt 1753663 - 1754178 + | O-6-alkylguanine-DNA:cysteine-protein methyltransferase TERM 2337 1754539 - 1754523 - g 78 -6.5 -4.62783 | CATCGAGCGCAAAAA GCCCATT CAG AAAGGGC AAACTCTGTTTAAAG TERM 2338 1754836 - 1754850 + G 71 -8.6 -3.78934 | overlap 1754833 GAAATTAAAGGCGAT CAGGAT ATG ATCCTG TTATTGTCGAAGAAA TERM 2339 1755090 - 1755078 - g 80 -9.1 -4.21908 | overlap 1755068 1755080 TATTACTATTGAAAA CAGCG ATG CGCTG GCGGCCCTCGCCGGT fnr 1754374 - 1755126 + | fumarate/nitrate reduction transcriptional regulator ydaA 1755277 - 1756224 + | universal stress protein UspE ynaJ 1756533 - 1756279 - | putative inner membrane protein ynaI 1756772 - 1757803 + | putative integral membrane protein TERM 2340 1757847 - 1757806 - T 100 -13.1 -5.18371 | gap 1, opp_overlap 1757810, overlap 1757810 1757811 TGCGACAAAATAAAA GATAGC-CGGTGCCCGATAA GTG TTATCGGGCACCGAGGCTTC CCTGTCCGGATGGCG TERM 2341 1757810 - 1757844 + T 90 -14.5 -3.12668 | gap 2, opp_overlap 1757806 1757810 1757811 ACAAAATAAAAGATA GCC--GGTGCCCGATAA GTG TTATCGGGCACCGAGGC TTCCCTGTCCGGATG TERM 2342 1757842 - 1757810 - T 100 -17.1 -3.67607 | opp_overlap 1757810, overlap 1757806 1757811 ACAAAATAAAAGATA GCCGGTGCCCGATAA GTG TTATCGGGCACCGAG GCTTCCCTGTCCGGA TERM 2343 1757841 - 1757811 - T 100 -20.6 -2.78124 | opp_overlap 1757810, overlap 1757810 1757806 CAAAATAAAAGATAG CCGGTGCCCGATAA GTG TTATCGGGCACCGA GGCTTCCCTGTCCGG STM1664 1758491 - 1757889 - | putative transcriptional regulator TERM 2344 1758466 - 1758479 + g 79 -3.1 -5.2189 | overlap 1758476 TCGGCGCCCGCCGTG GTCGA TAAG TTGAC TTTTTTGGTCATTGG TERM 2345 1758675 - 1758663 - g 70 -9.1 -3.64488 | opp_overlap 1758662, overlap 1758661 1758664 AATCGCGCTAAAAGA GGCCT GTC AGGCC GTAATTAACGGCCAA STM1665 1758535 - 1759221 + | putative cytoplasmic protein STM1667 1760250 - 1759693 - | putative thiol peroxidase STM1668 1761179 - 1760349 - | hypothetical protein STM1669 1763182 - 1761200 - | invasin-like protein TERM 2346 1763202 - 1763222 + r 73 -11.1 -2.64322 | overlap 1763201 1763200 TTGTCTCCTGCTATA TCCCCCTGC CTG GCAGAGGGA GTATTTAAATAAGAT STM1670 1764102 - 1763257 - | putative lipoprotein TERM 2347 1765040 - 1765024 - g 72 -3.7 -4.7497 | TCGATGGAGGAAAAA TACCC ATGTCGA GGGTA ATAAAATGTGGTAAA STM1671 1764396 - 1765253 + | putative regulatory protein TERM 2348 1765403 - 1765390 - T 73 -2.3 -5.21683 | ATTGAAAAAAATAAA TTGCG TGCA CGCGA CACCGGAGACAGATT TERM 2349 1766450 - 1766424 - T 72 -5.3 -4.63107 | gap 1, overlap 1766442 AGTAAAGAAGCAAAA GTTAAACGACTG AAGG CAGT-GCTTAAC ACCTTTTCGCGAAAC STM1673 1767221 - 1766967 - | putative outer membrane lipoprotein TERM 2350 1767300 - 1767314 + r 73 -2.1 -5.15634 | overlap 1767301 CCCTGTTTGTCCGTA TCTGA CTGGC TCAGG TTTTTTGATGCGCTG STM1674 1767922 - 1767332 - | putative regulatory protein TERM 2351 1768468 - 1768450 - g 70 -8.8 -3.72893 | opp_overlap 1768458 1768459, overlap 1768451 1768453 TACGCCGCCAGTAAA TCAGCCCT GCA AGGGCTGG CGCGCGGCCTGGCCC TERM 2352 1768467 - 1768451 - g 72 -12.3 -2.83522 | opp_overlap 1768458 1768459, overlap 1768450 1768453 ACGCCGCCAGTAAAT CAGCCCT GCA AGGGCTG GCGCGCGGCCTGGCC STM1675 1768000 - 1768713 + | oxidoreductase TERM 2353 1768764 - 1768728 - T 80 -12.4 -3.05963 | opp_overlap 1768723 1768733, overlap 1768731 ACGGCCAGGCGAATA TCACACGGTTGCCG TCTACGCTC CGGCAACCGTGTTA GAAGCTGTTCATGCG TERM 2354 1768761 - 1768731 - T 83 -14.1 -2.75074 | opp_overlap 1768723 1768733, overlap 1768728 GCCAGGCGAATATCA CACGGTTGCCG TCTACGCTC CGGCAACCGTG TTAGAAGCTGTTCAT TERM 2355 1768733 - 1768759 + T 75 -10.9 -3.04248 | opp_overlap 1768731 1768728, overlap 1768723 CAGGCGAATATCACA CGGTTGCCG TCTACGCTC CGGCAACCG TGTTAGAAGCTGTTC STM1676 1769673 - 1768804 - | putative aldo/keto reductase STM1677 1770852 - 1769947 - | putative transcriptional regulator TERM 2356 1770260 - 1770241 - G 76 -2.7 -5.03314 | opp_overlap 1770255 TTCACGCGTAAAAAA CCAGTCG ATGGTA CGCCCGG TGCGGTGGTTCAGGT STM1678 1770971 - 1771900 + | putative 2'-hydroxyisoflavone reductase mppA 1773610 - 1771997 - | periplasmic murein tripeptide transport protein ycjI 1773800 - 1774528 + | murein peptide amidase A ycjG 1775468 - 1774503 - | putative chloromuconate cycloisomerase TERM 2357 1775146 - 1775117 - G 76 -5 -4.72272 | gap 3, opp_overlap 1775128 GCGCGGTAGTAAAAA CCGGG--GC-CAGCG TCA CGCCGAGCAGCCCGG CAAGGCTTTGCTGCC tpx 1775584 - 1776090 + | thiol peroxidase TERM 2358 1776106 - 1776091 - T 77 -10.4 -3.41878 | opp_overlap 1776092 1776092 1776093 1776095 1776095, overlap 1776095 GTCCTGAAGGCATAA GCCAGC GCCT GCTGGC GCTACGTTTGTCAGT TERM 2359 1776146 - 1776175 + T 100 -17.3 -4.55023 | opp_overlap 1776149 1776152 GGTGCTCTTTTGTCA CAAGAAGGCCTCT ATCC GGAGGCCTTCTTG TTTTCTACTCTTCAC TERM 2360 1776172 - 1776149 - T 81 -12.5 -3.28712 | opp_overlap 1776146, overlap 1776152 GCTCTTTTGTCACAA GAAGGCCTC TATCCG GAGGCCTTC TTGTTTTCTACTCTT TERM 2361 1776169 - 1776152 - T 72 -8.4 -3.78934 | opp_overlap 1776146, overlap 1776149 CTTTTGTCACAAGAA GGCCTC TATCCG GAGGCC TTCTTGTTTTCTACT tyrR 1777721 - 1776180 - | DNA-binding transcriptional regulator TyrR TERM 2362 1777860 - 1777824 - R 72 -5 -4.58663 | gap 1, opp_overlap 1777850, overlap 1777825 1777826 AGCATGGCGGAAAAA CGGGCGCTG-CGGCGTA AAGC CAGGCCGTCAGCGCCAT GTGAAAGGTCATTTC TERM 2363 1777858 - 1777826 - R 76 -12 -2.60508 | gap 1, opp_overlap 1777850, overlap 1777825 1777824 CATGGCGGAAAAACG GGCGCTG-CGGCGTA AAGC CAGGCCGTCAGCGCC ATGTGAAAGGTCATT ycjF 1778930 - 1777869 - | hypothetical protein ycjX 1780330 - 1778927 - | putative ATPase TERM 2364 1779095 - 1779053 - G 80 -9.1 -4.15565 | gap 1, overlap 1779070 CTGACTATCCCAAAA CGCTTGCCCCGGC-AAACGC GAAG GCACTTCGCCGGGGTACACG GTTAACGGCGCGCCG TERM 2365 1779738 - 1779764 + g 77 -7.2 -4.25104 | gap 1, opp_overlap 1779733 1779732 TGCAAATAATCCGTC CAGGC-GGCGG CAATCT CCGCCAGCCGG TTTTCATCGGCGGGC TERM 2366 1780441 - 1780425 - R 83 -10.8 -3.80018 | opp_overlap 1780422 CGGAGAGATCAACAA CGGCGC ATTAA GCGCCG CGGTTAGTATGAGTA TERM 2367 1780465 - 1780475 + r 89 -4 -5.72207 | opp_overlap 1780465 ATGAGTATTGAGCAA TAGA TTA TCTA TTTTTTTACTTTCGG pspE 1780787 - 1780473 - | thiosulfate:cyanide sulfurtransferase (rhodanese) pspD 1781081 - 1780863 - | peripheral inner membrane phage-shock protein pspC 1781463 - 1781104 - | DNA-binding transcriptional activator PspC pspB 1781687 - 1781463 - | phage shock protein B pspA 1782415 - 1781747 - | phage shock protein PspA TERM 2368 1782340 - 1782352 + g 89 -9.1 -4.56597 | GGCGCACCAGCTTCT GCGGA TCT TCCGC TTTTTCCAACAACGC TERM 2369 1783481 - 1783453 - g 83 -6.1 -4.87626 | gap 1, opp_overlap 1783454, overlap 1783454 CTGCAACAGGAAAAA GCGCTGCTGCAA CGTAGC TTACAGCAG-GC GAAGTTTAACCAGAA pspF 1782586 - 1783566 + | phage shock protein operon transcriptional activator sapA 1783678 - 1785327 + | peptide transport protein TERM 2370 1785796 - 1785786 - g 71 -8.2 -3.78329 | opp_overlap 1785786 CTTTATGAAGTTAAA CCGG TTA CCGG TTTCGCCATCATTGA sapB 1785324 - 1786289 + | peptide transport protein TERM 2371 1786557 - 1786581 + G 85 -11.3 -3.96624 | CCGCCTGTTAAGCGG CGCGGCGCCCA CGG TCGGCGGCGCG TTTATCGTAACGCTG sapC 1786276 - 1787166 + | peptide transport protein sapD 1787166 - 1788158 + | peptide transport protein TERM 2372 1788627 - 1788655 + G 80 -8.7 -4.09685 | opp_overlap 1788628, overlap 1788628 1788630 1788653 GGCGCCGGGGCAGAA ACAGCGTCTGGGC CTG GCCCGCGCGCTGA TTTTACGCCCTAAAG TERM 2373 1788628 - 1788654 + G 76 -12.2 -3.05597 | opp_overlap 1788628, overlap 1788627 1788630 1788653 GCGCCGGGGCAGAAA CAGCGTCTGGGC CTG GCCCGCGCGCTG ATTTTACGCCCTAAA sapF 1788160 - 1788966 + | peptide transport protein STM1697 1789691 - 1789095 - | hypothetical protein TERM 2374 1789780 - 1789757 - R 73 -2.4 -5.20534 | ATCAATCAATAAAAA CGATCAATAT ATAA AAAATGATCG AAAAAACAATATATG STM1698 1791530 - 1790157 - | putative inner membrane protein STM1698A 1791565 - 1791744 + | hypothetical protein ycjE 1791719 - 1792018 + | putative cytoplasmic protein fabI 1792136 - 1792924 + | enoyl-(acyl carrier protein) reductase yciW 1793124 - 1794104 + | putative cytoplasmic protein TERM 2375 1794129 - 1794139 + F 70 -2.4 -5.03715 | GCGCCCGATCGCTTT AGCG CCG CGCA TTTTTTCCCGCTACT TERM 2376 1794247 - 1794235 - f 72 -4.8 -4.60924 | TAAATCGTTTAAAAA TCGC GTTGG GCGA AACCTATTAACTCAT TERM 2377 1795228 - 1795242 + G 80 -4.2 -5.00616 | overlap 1795230 GCGGACGGCACCATT GACGAT GAT ATCGCC TTTTTTGCGGCCACC rnb 1794346 - 1796280 + | exoribonuclease II TERM 2378 1796326 - 1796300 - f 85 -13.8 -3.06796 | opp_overlap 1796300 GCTTAGCTCACTCAA CGGCCTTTGC TGAGAAG GCAAAGGCCG TTTCTTTTCTTCTTC TERM 2379 1796300 - 1796326 + F 100 -14.5 -4.96427 | opp_overlap 1796300 GCTTAGCTCACTCAA CGGCCTTTGCT GAGAA GGCAAAGGCCG TTTCTTTTCTTCTTC TERM 2380 1797697 - 1797712 + G 77 -3.9 -5.00616 | GCCAAAGAAGGCGGC CGCGG TCAGTT CTGCG TTTTTTCGCCGGAAA yciR 1796542 - 1798524 + | RNase II stability modulator TERM 2381 1799142 - 1799131 - g 74 -7.2 -4.18058 | AACTACACGCTAAAA CGCC GACT GGCG GAGTTCGCCGCCTCG yciT 1798912 - 1799664 + | putative regulatory protein osmB 1799923 - 1800141 + | lipoprotein TERM 2382 1800229 - 1800254 + T 100 -11.9 -4.4078 | CAAAGTTGACTTTTA CGCCACGGT AATTTACA ACCGTGGCG TTTTCATTAGCCGCC yciH 1800587 - 1800261 - | translation initiation factor Sui1 pyrF 1801324 - 1800587 - | orotidine 5'-phosphate decarboxylase TERM 2383 1800973 - 1801008 + g 83 -12.6 -3.28712 | gap 1, opp_overlap 1800977, overlap 1800977 ACGGCGCATCTTTAC TGAATGGCGCCAGCGCG TCG CGCGCTGCGGCCAT-CA TTCTCGCCCCGCCAG TERM 2384 1801005 - 1800977 - G 91 -14.5 -3.06183 | opp_overlap 1800973 1800977 CGCATCTTTACTGAA TGGCGCCAGCGCG TCG CGCGCTGCGGCCA TCATTCTCGCCCCGC TERM 2385 1800977 - 1801005 + g 83 -14.5 -2.82623 | opp_overlap 1800977, overlap 1800973 CGCATCTTTACTGAA TGGCGCCAGCGCG TCG CGCGCTGCGGCCA TCATTCTCGCCCCGC TERM 2386 1801445 - 1801458 + r 73 -4.5 -4.73973 | ATAAGCCCTGGTCGC CGATG CTAG CGTCG TTTCTTGTTTTATGT yciM 1802684 - 1801515 - | hypothetical protein TERM 2387 1802544 - 1802600 + g 76 -3.2 -5.09762 | gap 2 ATCTTGTTGGTTACT CAGCAGGAAGTTAACC-CCTG-CG ACATAATCGCG CGACAGGCGGTTAGCTTCATCCTG TTTTGTTTGTTGCGC yciS 1802999 - 1802691 - | putative inner membrane protein pgpB 1803913 - 1803149 - | phosphatidylglycerophosphatase B ribA 1804109 - 1804699 + | GTP cyclohydrolase II acnA 1807430 - 1804755 - | aconitate hydratase TERM 2388 1805136 - 1805146 + g 100 -8.2 -5.19212 | opp_overlap 1805135 TTTCCCGGCAATTAC CGCC AGC GGCG TTTTTTCCTGCTGGT TERM 2389 1807175 - 1807161 - G 71 -10 -3.54543 | AGGCACGCCGGTAAA GTCCTG CAT CAGGAC ACGGGCGGGCCGCCA TERM 2390 1807577 - 1807602 + r 72 -9.1 -3.55622 | opp_overlap 1807577 AGCGAAGATGAAAAA GCCCGATAA ATAACGCA TTATCGGGC TTTGACGAGATTAGA TERM 2391 1807602 - 1807577 - R 93 -9.1 -4.88228 | opp_overlap 1807577 AGCGAAGATGAAAAA GCCCGATAA ATAACGCA TTATCGGGC TTTGACGAGATTAGA cysB 1809381 - 1808407 - | transcriptional regulator CysB TERM 2392 1809763 - 1809746 - R 100 -14.1 -5.37043 | opp_overlap 1809744 AGGGGATATAAAAAA GGGCCGC TTAC GCGGCCC GCTTGACTATAGTGA topA 1812389 - 1809792 - | DNA topoisomerase I TERM 2393 1810807 - 1810825 + g 76 -3.1 -5.03314 | overlap 1810809 TTTTCTTCCAGCCGG TCGGTGA CGATT TCACCCA TTTTTTCCGCATAGA TERM 2394 1811468 - 1811479 + g 71 -4.4 -4.63218 | opp_overlap 1811459 CATACAGACGCTGCG CCAT CATC ATGG TTTTCTTCACGCCAA TERM 2395 1813008 - 1812973 - g 74 -7.7 -4.11692 | gap 1, opp_overlap 1812972, overlap 1812999 TACCGACCCCTAAAA GCACCGCGGTGTTTAA CATGT TTAAACACCT-GGCGC ATGTGCTGTCTGAGA yciN 1812792 - 1813043 + | hypothetical protein TERM 2396 1813076 - 1813048 - T 90 -16.1 -2.56596 | opp_overlap 1813044 1813058, overlap 1813044 TGGTTGATTAATCCA TGCCGGATGGC GCTGAAT GCCATCCGGCA ATAGCGGTTTACATC sohB 1814131 - 1813085 - | putative periplasmic protease TERM 2397 1814530 - 1814513 - g 77 -7.7 -4.2772 | gap 1 CGCAACGAAGAGAAA CTGCGTCG GGT CG-CGCAG CACATTGCTGACGAG yciK 1814369 - 1815130 + | short chain dehydrogenase TERM 2398 1815576 - 1815560 - g 73 -10.8 -3.3676 | TGGAAGAGGTCATAA GCGCGC TAAAC GCGCGC CCTGGTCACCAGACG btuR 1815127 - 1815717 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 2399 1815763 - 1815734 - T 74 -10.8 -3.14931 | gap 1, opp_overlap 1815732 1815735, overlap 1815719 CGTAGGCCGGATTAA GGCGTTTGCGCCG CCATC CGGCACAAAC-CC TCTTGTCTGATGATC TERM 2400 1815735 - 1815763 + T 70 -8.8 -3.35616 | opp_overlap 1815719 1815734, overlap 1815732 GTAGGCCGGATTAAG GCGTTTGCGCCG CCATC CGGCACAAACCC TCTTGTCTGATGATC yciL 1816679 - 1815804 - | 23S rRNA pseudouridylate synthase B TERM 2401 1815991 - 1816013 + g 74 -10.4 -3.53091 | GCGAGGTCGAGCTCA GTCCAGCCGC CGC GCGGCAGGCC TTTCGGCAGCGGGAT TERM 2402 1816561 - 1816576 + g 80 -9 -4.13767 | opp_overlap 1816558 1816561 GTGACTTCAACACGA TCGCCA AGCG TGGCGA TTTTACCGTCAACGC TERM 2403 1816746 - 1816729 - R 79 -10.5 -3.49851 | opp_overlap 1816729 1816730 1816740, overlap 1816725 1816730 GAACAGGAGAATGAA CGGCGCG TTGC CGCGCCA TTTTAAGGCCGCGTA TERM 2404 1816729 - 1816746 + r 76 -8.3 -4.07885 | opp_overlap 1816725 1816729 1816730, overlap 1816730 1816740 GAACAGGAGAATGAA CGGCGCG TTGC CGCGCCA TTTTAAGGCCGCGTA TERM 2405 1816745 - 1816730 - R 76 -11.8 -2.69188 | opp_overlap 1816730 1816729 1816740, overlap 1816729 1816725 AACAGGAGAATGAAC GGCGCG TTGC CGCGCC ATTTTAAGGCCGCGT TERM 2406 1816730 - 1816745 + r 78 -11.8 -3.04517 | opp_overlap 1816729 1816725 1816730, overlap 1816729 1816740 AACAGGAGAATGAAC GGCGCG TTGC CGCGCC ATTTTAAGGCCGCGT yciO 1817400 - 1816780 - | hypothetical protein TERM 2407 1817186 - 1817146 - G 71 -8.4 -3.86202 | gap 1 TTTCATCAGACGAAA TG-CCACGTTGTCGACGTA GGAG TAGGTCGACAACTCGGACA AATCGCGGCACATCA trpH 1818289 - 1817408 - | hypothetical protein TERM 2408 1817882 - 1817840 - G 74 -8.3 -3.9712 | gap 1, overlap 1817841 GCACTCCACCAGAAA GCGGGCGAAGTGGCCGCGCG TCAC CGCGCCGCCA-TTGGCCAGT CTCAATGCCCCTTCC TERM 2409 1817881 - 1817841 - G 75 -11.8 -2.97951 | gap 1, overlap 1817840 CACTCCACCAGAAAG CGGGCGAAGTGGCCGCGCG TCAC CGCGCCGCCA-TTGGCCAG TCTCAATGCCCCTTC TERM 2410 1818006 - 1817985 - G 74 -6.6 -4.36914 | overlap 1817987 TGCTGCGCCAGAAAA TCGCGCAT TGCCGG ATGCGCAA TATCAATATTCAGAC trpL 1818411 - 1818455 + | trp operon leader peptide TERM 2411 1818501 - 1818519 + F 100 -10.2 -5.75342 | GCCAAACGATACCCG GCCCGCCT GTT AAGCGGGC TTTTTTTTGAACAAA TERM 2412 1819339 - 1819356 + G 70 -6.9 -4.1899 | GGCGAGATATTTCAG GTGGTGC CGTC GCGCCGC TTTTCACTGCCCTGC trpE 1818550 - 1820112 + | anthranilate synthase component I TERM 2413 1821234 - 1821217 - g 70 -2.7 -4.74706 | gap 1, overlap 1821218 1821219 GCCAACAGTTAAAAA CGC-GAAC CCT GTTCAACG TACTCGGCCCGCTGA TERM 2414 1821244 - 1821285 + G 75 -11.7 -2.87132 | gap 1, opp_overlap 1821218 1821254, overlap 1821265 TCAACGTACTCGGCC CGCTGATCAAC-CCGGCG CATCCGC CGCTGGCGTTGATTGGCG TCTATAGCCCGGAAC TERM 2415 1821533 - 1821515 - g 71 -4.4 -4.63932 | opp_overlap 1821515 CACGCCGGAAGAAAA CCGTGACA TTC TGACGCGG TTATTACAAGGTAAA trpD 1820112 - 1821707 + | bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase TERM 2416 1822098 - 1822111 + G 71 -8.1 -3.81287 | CTTGCCCGTTACTAT CAGGC CGAT GCCTG TTTACTGATGCTCTC TERM 2417 1823009 - 1823031 + G 70 -9.8 -3.34236 | opp_overlap 1822995, overlap 1823011 AGGTGTGGAGTCACA GCCGGGCATC AAA GATGCTCGTC TTCTGGCCTCAGTTT TERM 2418 1823011 - 1823029 + G 74 -11 -3.23572 | overlap 1823009 GTGTGGAGTCACAGC CGGGCATC AAA GATGCTCG TCTTCTGGCCTCAGT trpC 1821711 - 1823069 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 2419 1823791 - 1823806 + G 70 -3.2 -4.73613 | overlap 1823753 GCGGCTCAAACGCTA TCGGGA TGTT TGCCGA TTTTATTAATGATAC trpB 1823079 - 1824272 + | tryptophan synthase subunit beta trpA 1824272 - 1825078 + | tryptophan synthase subunit alpha TERM 2420 1825087 - 1825109 + F 81 -12.7 -3.18912 | opp_overlap 1825061 1825079 CGCATAACGGGTTAA GCCGTCAGC ATAAC GCTGGCGGC TTAATGAGTGGCTGG TERM 2421 1825405 - 1825395 - f 72 -2.6 -5.09259 | opp_overlap 1825395, overlap 1825390 TATTCTAAAAGAAAA TATA GAA TATA TTATCTCTAAACCAT TERM 2422 1825510 - 1825523 + F 70 -2.3 -5.00616 | overlap 1825511 TAATAGGGTGTCGAC ACGGT TAAA ACCGA TTTTTTCAGCAAGCA yciG 1825558 - 1825740 + | putative cytoplasmic protein TERM 2423 1825782 - 1825806 + F 71 -7.2 -4.07568 | gap 1, opp_overlap 1825782 1825783, overlap 1825783 GCTTTTATCAAGCAA T-CTGCGAGTC TTCT GGCTCGCAGTA TTTTGCCCAGGAGAA TERM 2424 1825783 - 1825804 + F 88 -12.3 -3.63744 | opp_overlap 1825782 1825783, overlap 1825782 CTTTTATCAAGCAAT CTGCGAGTC TTCT GGCTCGCAG TATTTTGCCCAGGAG TERM 2425 1826257 - 1826245 - g 70 -5.5 -4.42464 | overlap 1826246 AACTGCTCAAAGAAA CCCTC GAC GAGGA AAAACAAACTGATTT yciF 1825830 - 1826333 + | putative cytoplasmic protein yciE 1826407 - 1826913 + | putative cytoplasmic protein STM1731 1826933 - 1827811 + | putative catalase TERM 2426 1827850 - 1827868 + T 100 -16 -5.14563 | GTCATGTCCTTTTTT GACCCCGC CTG GCGGGGTC TTTTTTCGTCACAAC ompW 1828531 - 1827893 - | outer membrane protein W TERM 2427 1828609 - 1828591 - H 74 -8.2 -3.86634 | opp_overlap 1828590 1828591 1828602 ACAATGAAGTAATAA GTGATCTA ATA CAGATCAC ATTTGTTCTTATAAT TERM 2428 1829041 - 1829031 - g 74 -3.2 -4.90266 | opp_overlap 1829036 GGTACCAACCAAAAA CAGC CGC ACTG TAAAGCGCTAATTGG STM1733 1828869 - 1829273 + | putative ferredoxin yciC 1829299 - 1830042 + | hypothetical protein TERM 2429 1830073 - 1830044 - f 72 -10.8 -2.77344 | gap 1, opp_overlap 1830061, overlap 1830043 TGATTCGCCAATAAT CCGCAATGCGCCG TTACG CGGCGCATT-CGA CGCTCGTTGATGATG TERM 2430 1830177 - 1830210 + G 85 -11.1 -3.92869 | gap 1, opp_overlap 1830163, overlap 1830166 1830163 1830180 ATCTATGCGGCGACC TCCGCACTGATTGTCG CGA CGGCAATC-GTGCTGA TTTATAGCTGGGTGC TERM 2431 1830180 - 1830207 + G 72 -11.4 -3.02745 | gap 1, opp_overlap 1830163, overlap 1830166 1830163 1830177 TATGCGGCGACCTCC GCACTGATTGTCG CGA CGGCAATC-GTGC TGATTTATAGCTGGG TERM 2432 1830460 - 1830473 + G 85 -2.3 -5.4833 | GGTCAAAGCTGAACC TGGCG TGGG CGCTG TTTTTTATTGCGTGC yciB 1830099 - 1830638 + | intracellular septation protein A TERM 2433 1831128 - 1831140 + G 70 -3.3 -4.68511 | GCAGCGCTACAAGGC CACCG AGG CGCTG TTTATTTATGTTGCC yciA 1830799 - 1831200 + | acyl-CoA thioester hydrolase tonB 1831988 - 1831260 - | transport protein TonB yciI 1832212 - 1832508 + | YciI-like protein TERM 2434 1832524 - 1832543 + F 100 -15 -3.91897 | opp_overlap 1832513 1832515 1832512 AAAGGATGGCCTGTT GGGCACCG CATA CGGTGCCC TTTCTGGCTCACACA cls 1832868 - 1834328 + | cardiolipin synthetase STM1741 1835575 - 1834739 - | putative voltage-gated potassium channel TERM 2435 1835616 - 1835596 - R 95 -12.6 -4.21812 | opp_overlap 1835592 1835591 CCTCACCTAAAAGAA GGGCTGAC GAATT GTCAGCCC TTGCGATTATAACGG oppF 1836627 - 1835623 - | oligopeptide transport protein TERM 2436 1835704 - 1835749 + g 76 -11.8 -3.14211 | gap 1 TTGCGCGCATTCTGG CCCGGCTATCGGACAGCGTGT ACGGA ACACGCAG-CCGGAAGGCGGG TTAATGGGCGAAGGT oppD 1837631 - 1836624 - | oligopeptide transporter ATP-binding component oppC 1838551 - 1837643 - | oligopeptide transport protein TERM 2437 1838519 - 1838531 + g 100 -9.1 -5.1963 | TTCACTGAAATTTTC CAGCG TCT CGCTG TTTTTCTTACTTAAC oppB 1839486 - 1838566 - | oligopeptide transporter permease TERM 2438 1839220 - 1839176 - G 78 -2 -5.14965 | gap 2, opp_overlap 1839213, overlap 1839162 1839177 1839178 ACCGCCAGCAAAAAA GCGGCGGCGCCAAGTTTCGCCG AAA CGGGGAAGCT-GGCGGCAAC-C AGATCGTTGACCGTG TERM 2439 1839604 - 1839569 - R 82 -5.4 -5.14965 | opp_overlap 1839574 1839576, overlap 1839571 1839573 1839574 1839576 AGTGCGATGAAAAAA GACACCATGGGACAAC CGCA GTTGTCCCATGTCTTG CCATTAATGTTTGAT TERM 2440 1839602 - 1839571 - R 76 -8 -4.20707 | opp_overlap 1839574 1839576, overlap 1839569 1839573 1839574 1839576 TGCGATGAAAAAAGA CACCATGGGACAAC CGCA GTTGTCCCATGTCT TGCCATTAATGTTTG TERM 2441 1839600 - 1839573 - R 93 -12.8 -3.69447 | opp_overlap 1839574 1839576, overlap 1839571 1839569 1839574 1839576 CGATGAAAAAAGACA CCATGGGACAAC CGCA GTTGTCCCATGT CTTGCCATTAATGTT TERM 2442 1839599 - 1839574 - R 93 -16.3 -2.80583 | opp_overlap 1839574 1839576, overlap 1839573 1839571 1839569 1839576 GATGAAAAAAGACAC CATGGGACAAC CGCA GTTGTCCCATG TCTTGCCATTAATGT TERM 2443 1839574 - 1839599 + r 93 -16.3 -3.10732 | opp_overlap 1839574 1839573 1839571 1839569 1839576, overlap 1839576 GATGAAAAAAGACAC CATGGGACAAC CGCA GTTGTCCCATG TCTTGCCATTAATGT TERM 2444 1839576 - 1839597 + r 82 -13.1 -3.10879 | opp_overlap 1839574 1839573 1839571 1839569 1839576, overlap 1839574 TGAAAAAAGACACCA TGGGACAAC CGCA GTTGTCCCA TGTCTTGCCATTAAT TERM 2445 1839597 - 1839576 - R 82 -13.1 -2.92912 | opp_overlap 1839576 1839574, overlap 1839574 1839573 1839571 1839569 TGAAAAAAGACACCA TGGGACAAC CGCA GTTGTCCCA TGTCTTGCCATTAAT oppA 1841239 - 1839608 - | oligopeptide transport protein TERM 2446 1840756 - 1840774 + g 74 -2.4 -5.00884 | gap 1, overlap 1840756 CATCAAGCGCTTTTA CCC-CCA GATCGG TGGCGGG TTTTTTACCGGCGAT TERM 2447 1841982 - 1841961 - R 90 -13.7 -3.36492 | gap 1 GTGGGAATGTCACAA GGCGGC-CCC TTA GGGCGCCGCC TGTAAATCAGCAGGT ychE 1842651 - 1842004 - | hypothetical protein TERM 2448 1842578 - 1842564 - G 77 -7.8 -4.26076 | overlap 1842565 1842574 TCATGCTGATGAAAA CGGGGA TAA TCCCCA CCGGGTTAACCAGCG TERM 2449 1844010 - 1843994 - g 71 -4.3 -4.59773 | overlap 1843995 CGTTATCCTGAAAAA TGGCGCT CTG AACGCCG CTATCGTCGGCCAGC adhE 1843128 - 1845806 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2450 1845802 - 1845789 - T 83 -4.5 -5.43487 | opp_overlap 1845789 AAAGCAGAGAAAAAA GCGAA AAAA TCCGC TTAATTCGTTATCTG TERM 2451 1845835 - 1845852 + T 100 -12.7 -6.09196 | opp_overlap 1845835 TTAGCATGACAATAA CGGCCTC AATT GAGGCCG TTTTTTTGTTTTACC TERM 2452 1845852 - 1845835 - T 95 -12.7 -3.85864 | opp_overlap 1845835 TTAGCATGACAATAA CGGCCTC AATT GAGGCCG TTTTTTTGTTTTACC tdk 1846620 - 1846003 - | thymidine kinase TERM 2453 1847619 - 1847605 - g 78 -7.1 -4.55128 | opp_overlap 1847614 ACGGTGAAACTAAAA CCTGG ACTGG CCAGG GTCGTACACCGGCTG hns 1847283 - 1847696 + | global DNA-binding transcriptional dual regulator H-NS TERM 2454 1847735 - 1847719 - T 100 -13.7 -4.11216 | opp_overlap 1847719 CCTGGATGCTTAAAA TCCCGCC GCT GGCGGGA TTTTTTTTGCCTGAG TERM 2455 1847719 - 1847735 + T 100 -13.7 -5.81412 | opp_overlap 1847719 CCTGGATGCTTAAAA TCCCGCC GCT GGCGGGA TTTTTTTTGCCTGAG TERM 2456 1847800 - 1847782 - T 100 -9.5 -5.64274 | opp_overlap 1847782 CCAGGCATAAAAAAA GCGCCGG ATTTA CCAGCGC TTCTGTTAAAAAATT galU 1848736 - 1847828 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalU hnr 1849952 - 1848939 - | response regulator of RpoS TERM 2457 1849665 - 1849683 + g 71 -4.5 -4.66537 | overlap 1849667 CCCAAGGCGCAACGC TTTGGCG ATATC CGCCATA TTTTCTGTTGCGGAA ychK 1850948 - 1850043 - | hypothetical protein TERM 2458 1851020 - 1851034 + H 100 -7.8 -5.47159 | opp_overlap 1851013 1851012, overlap 1851021 AACATAATGCCACCC TGGCGT TCA ACGCCG TTTTTTATATTCAGG TERM 2459 1851021 - 1851033 + H 77 -9.1 -3.87211 | opp_overlap 1851013 1851012, overlap 1851020 ACATAATGCCACCCT GGCGT TCA ACGCC GTTTTTTATATTCAG ychJ 1851059 - 1851517 + | hypothetical protein TERM 2460 1852346 - 1852377 + G 73 -5.8 -4.41616 | gap 1, overlap 1852347 AAAACGTATTAAGCC G-CGCGCTGTATCAG GTT CTGGCACAGCGAGTC TTTGTTTACGGCAAT TERM 2461 1852347 - 1852375 + G 76 -9.5 -3.81557 | overlap 1852346 AAACGTATTAAGCCG CGCGCTGTATCAG GTT CTGGCACAGCGAG TCTTTGTTTACGGCA purU 1851568 - 1852410 + | formyltetrahydrofolate deformylase TERM 2462 1852521 - 1852550 + T 70 -10 -3.06261 | gap 1, opp_overlap 1852519 TCATTTGATATGATG C-GCCCCGCTTCC CAAAA GGAAGCGGGCCAG TATTAAGCATTACCC TERM 2463 1853068 - 1853050 - T 77 -8.8 -3.92373 | overlap 1853051 1853066 GAGCGCAGCGAGAAA GCGTTGCC GCA GGCAACGA CCCGAAGGGCGAAGC TERM 2464 1853067 - 1853051 - T 80 -12.3 -2.95102 | overlap 1853050 1853066 AGCGCAGCGAGAAAG CGTTGCC GCA GGCAACG ACCCGAAGGGCGAAG TERM 2465 1853417 - 1853399 - T 77 -8.8 -3.92075 | overlap 1853400 1853415 AGCGTCAGCGAGAAA GCGTTGCC GCA GGCAACGA CCCGAAGGGCGAAGC TERM 2466 1853416 - 1853400 - T 80 -12.3 -2.94924 | overlap 1853399 1853415 GCGTCAGCGAGAAAG CGTTGCC GCA GGCAACG ACCCGAAGGGCGAAG TERM 2467 1853591 - 1853573 - T 77 -8.8 -3.92373 | overlap 1853574 1853589 GAGCGCAGCGAGAAA GCGTTGCC GCA GGCAACGA CCCGAAGGGCGAAGC TERM 2468 1853590 - 1853574 - T 80 -12.3 -2.95102 | overlap 1853573 1853589 AGCGCAGCGAGAAAG CGTTGCC GCA GGCAACG ACCCGAAGGGCGAAG STM1760 1855255 - 1853726 - | TPR repeat-containing protein TERM 2469 1854621 - 1854609 - G 74 -3.3 -4.91109 | CCTTCACCATAAAAA TAGGC AAC GCCGA GATAAAGTTGCGCGG TERM 2470 1855021 - 1855039 + g 71 -7.4 -3.96892 | overlap 1855024 GTTTACCCGCTTTCT CCAGCCAT TTT ATGGCTAG TTTATAATCAGGCTT TERM 2471 1855476 - 1855461 - R 100 -10.4 -5.65177 | opp_overlap 1855461 ACAGCCATAAAAAAA CTCCGC CGAA GCGGAG TTTAGGGCATCGAGA TERM 2472 1855461 - 1855476 + r 79 -10.4 -3.55444 | opp_overlap 1855461 ACAGCCATAAAAAAA CTCCGC CGAA GCGGAG TTTAGGGCATCGAGA narI 1856174 - 1855497 - | nitrate reductase 1 gamma subunit narJ 1856884 - 1856174 - | nitrate reductase 1 delta subunit TERM 2473 1856768 - 1856752 - G 86 -10.1 -4.25848 | opp_overlap 1856752 1856747, overlap 1856753 AATCGCGCAGGAAAA CGCCCAG AGT CTGGGCA TCCTCTTTATCCAGG TERM 2474 1856767 - 1856753 - G 72 -11.4 -3.15027 | opp_overlap 1856752 1856747, overlap 1856752 ATCGCGCAGGAAAAC GCCCAG AGT CTGGGC ATCCTCTTTATCCAG narH 1858416 - 1856881 - | nitrate reductase 1 beta subunit TERM 2475 1858032 - 1858060 + g 74 -9.6 -3.62354 | gap 1, opp_overlap 1858035, overlap 1858030 TCCGCTGGCCGGTAA TCAG-CGAGCGCG GACG CGCGATCGGCTGA TGTTTGCTTTCCGGC TERM 2476 1858319 - 1858333 + g 73 -5.6 -4.60041 | TATTCCATACCTTCG CGACTG GTC CAGACG TTTTTACAGGTGACT narG 1862156 - 1858413 - | nitrate reductase 1 alpha subunit TERM 2477 1859755 - 1859742 - G 74 -6.7 -4.25056 | opp_overlap 1859746 CAGCGGATGAATAAA CGGAT GCAT ATCCG AGGTATTCATATCGT TERM 2478 1860396 - 1860407 + g 78 -5.8 -4.72272 | opp_overlap 1860375, overlap 1860380 CGGCTGCCAGCCGGT CTGC GGAC GCAG TTTTTCCTGGCCGAC TERM 2479 1861012 - 1861033 + g 84 -8.7 -4.27584 | GGCGCTACCATTTCA CCGTTGCTG TTGA TAGCGACGG TTTTCCATTCCGGGT TERM 2480 1861870 - 1861889 + g 73 -10.6 -3.33037 | overlap 1861863 CAGGAGTAGCTTGCC CCGCGCGG GCAG CCGCGAGG TTCATGGTTTGGCAT TERM 2481 1862137 - 1862106 - G 74 -10.3 -3.57144 | gap 1, opp_overlap 1862100 GTGCCCATCGGCAAA GGTTTCGCC-CTTC TGCTT GAAGTAGCGAAACC GGTCCAGGAATTTAC TERM 2482 1862302 - 1862319 + r 76 -4.1 -5.07523 | overlap 1862300 CAAACCTCCTGCATA CTCCTTT GGGA GGAGGAG TTTTATTTATATATA TERM 2483 1862527 - 1862509 - R 100 -8.8 -6.06529 | TACAGATAAAAAAAA GCGCGG TCTAACG CCGCGC AAAGGATAATCAAAA narK 1863941 - 1862544 - | nitrite extrusion protein TERM 2484 1862702 - 1862688 - G 89 -2.7 -5.4505 | overlap 1862689 TTTCGGAATAAAAAA GCCGC CAATC GCGCC AATCGCGGAAATAAA TERM 2485 1863085 - 1863060 - G 70 -3.3 -4.69027 | gap 1, overlap 1863067 AAACGGACCGAAAAA CGCATAATGCAG GAT CTGCA-CATCCG GGAATTGCGTTTTAG TERM 2486 1863440 - 1863456 + g 72 -2.1 -4.86731 | overlap 1863441 1863455 GACCACCGTTCAGAC CCAGCGC GCC GCCCTGC TTTTGTTTAGGAAAG TERM 2487 1864874 - 1864919 + G 70 -9.7 -3.33492 | GTCAGCGCGACTTTA CCCAACGTGCCAATATCAGTG GACG CAATGAGATGGCCGCGTTGGG TTCTGCGCTCAATAA narX 1864282 - 1866078 + | nitrate/nitrite sensor protein NarX narL 1866071 - 1866721 + | transcriptional regulator NarL ychP 1868146 - 1866722 - | hypothetical protein ychN 1868323 - 1868676 + | putative sulfur reduction protein TERM 2488 1868734 - 1868758 + T 82 -3 -5.55769 | gap 2, opp_overlap 1868739, overlap 1868739 GCAAGAAAATCAGGC TAACACGCGAGT AAT AC-CGCGT-TTA TTTTTTCTTATGCCA TERM 2489 1868739 - 1868754 + T 82 -5.4 -5.22768 | gap 1, opp_overlap 1868739, overlap 1868734 AAAATCAGGCTAACA CGCGAGT AAT AC-CGCG TTTATTTTTTCTTAT chaB 1868986 - 1868756 - | cation transport regulator TERM 2490 1869458 - 1869475 + G 70 -6.9 -4.18908 | TAGCGCATCGACTCG GCGAACC CTAT GGATCGC TTATTTTAAGCCTGT TERM 2491 1869784 - 1869804 + G 81 -3.9 -5.1963 | overlap 1869786 TTGGTCGCGTTAATT TCCGCCG CGATGTA CGGCGTA TTTTTGTTGATTCAA TERM 2492 1869786 - 1869802 + G 70 -6.5 -4.21997 | overlap 1869784 GGTCGCGTTAATTTC CGCCG CGATGTA CGGCG TATTTTTGTTGATTC chaA 1869253 - 1870353 + | calcium/sodium:proton antiporter TERM 2493 1870384 - 1870363 - T 100 -10.2 -5.36441 | GCCTGATATAAAAAA GCCGGATA GTATCT TATCCGGC CTACACAAGCTAAAA kdsA 1871261 - 1870407 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2494 1871130 - 1871114 - G 73 -10.9 -3.406 | TGAACACGTAAGGAA TACCCAG CTT CTGGGTA ACGGTTACGTAGTGC ychA 1872108 - 1871299 - | putative transcriptional regulator TERM 2495 1871817 - 1871829 + g 74 -2.6 -5.03747 | CGCCCAACGATACCG CGCT CCCCT GGCG TTTTTTCAGGACTTT sirC 1872501 - 1872112 - | putative transcriptional regulator TERM 2496 1872210 - 1872194 - G 73 -5.8 -4.51196 | gap 1 GGGAAAGCGATAAAA CGC-GCC TGCT GGCTGCG CGCCTGACGATAATC hemK 1873331 - 1872498 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase prfA 1874413 - 1873331 - | peptide chain release factor 1 TERM 2497 1873577 - 1873612 + g 82 -5.2 -4.98911 | overlap 1873556 TGCCGTTTCGGCGGC GTGAATGCGCGCCCCG AGCA CCGAGAGCGCTTTCGC TTTGTTTTTATGCTG hemA 1875710 - 1874454 - | glutamyl-tRNA reductase lolB 1876024 - 1876647 + | outer membrane lipoprotein LolB TERM 2498 1877032 - 1877075 + G 71 -6.1 -4.24342 | gap 3, opp_overlap 1877034, overlap 1877034 GGCTTTCCATTGATG AACTGGCGACGCTCGGC-CTGA CGC TCGGCGCCGA-CGTC-CCGGTC TTTGTTCGTGGCCAC TERM 2499 1877034 - 1877073 + G 70 -8.7 -3.72374 | gap 3, opp_overlap 1877034, overlap 1877032 CTTTCCATTGATGAA CTGGCGACGCTCGGC-CTGA CGC TCGGCGCCGA-CGTC-CCGG TCTTTGTTCGTGGCC ipk 1876644 - 1877495 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2500 1877630 - 1877644 + F 75 -10 -3.62522 | GGCAAGCTGAGCTTC GGTGAC AAC GTCACC TTGTTCCAGACGTTG prsA 1877761 - 1878708 + | ribose-phosphate pyrophosphokinase TERM 2501 1878727 - 1878740 + F 100 -9.5 -5.76633 | opp_overlap 1878727 AACCCGGATCTGAAA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA TERM 2502 1878740 - 1878727 - f 75 -9.5 -3.60475 | opp_overlap 1878727 AACCCGGATCTGAAA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA ychM 1878857 - 1880518 + | putative sulfate transporter YchM ychH 1880841 - 1880563 - | hypothetical protein TERM 2503 1880974 - 1880946 - H 77 -9.1 -3.96148 | GGGTGCGATCACAAA TGTAAAGTTTCAT TTA ACAAAACTTTACA AATAACACACTGAAC pth 1881117 - 1881701 + | peptidyl-tRNA hydrolase TERM 2504 1881706 - 1881733 + F 70 -9.8 -2.94099 | opp_overlap 1881705 1881703 AGGCGCAATAACCAG TGATGTGCGGCA TTTT TGCCGCACGCCG TGTATAATAGGCGAA ychF 1881818 - 1882909 + | translation-associated GTPase TERM 2505 1882994 - 1882967 - T 74 -11.4 -2.80991 | opp_overlap 1882972, overlap 1882972 AGGCAAAGAAAGTCA TAAAATCCACGC AGCC GCGTGGATTTTT TATTTCATAATATCT TERM 2506 1882989 - 1882972 - T 95 -11.3 -4.53707 | opp_overlap 1882972, overlap 1882967 AAGAAAGTCATAAAA TCCACGC AGCC GCGTGGA TTTTTTATTTCATAA TERM 2507 1882972 - 1882989 + T 100 -11.3 -5.68438 | opp_overlap 1882972 1882967 AAGAAAGTCATAAAA TCCACGC AGCC GCGTGGA TTTTTTATTTCATAA TERM 2508 1883040 - 1883058 + T 71 -3.8 -4.78572 | GGCTCAATTAACGCA GAGCTAAC AGG GTAAGTTC TTTTCTTAATTACCA STM1785 1884333 - 1883068 - | putative cytoplasmic protein TERM 2509 1883113 - 1883102 - G 77 -4.4 -4.84359 | opp_overlap 1883102 GTATGGTTATAAAAA GGAT GCTG ATCC TTTAGCGGCGTCTCA TERM 2510 1885280 - 1885266 - g 74 -7 -4.35017 | opp_overlap 1885271, overlap 1885268 GAAAAACTGAAGAAA GCCGCC GCG GGCGCC AGCGCTATTATCGCC STM1786 1884828 - 1885946 + | hydrogenase-1 small subunit TERM 2511 1887013 - 1887036 + G 74 -7.4 -4.09739 | gap 1 CTGGTACCGCTATCC GGACGATCGGC TGG GCCG-TCATCC TTTTGACGGCATTAC TERM 2512 1887395 - 1887379 - g 83 -7.9 -4.67904 | GACCAACCTGAAAAA CGGCGAC CTG GCCACCG CCAATACCGAGAAAT STM1787 1885943 - 1887736 + | hydrogenase 1 large subunit STM1788 1887755 - 1888486 + | hydrogenase 1 b-type cytochrome subunit STM1789 1888483 - 1889079 + | hydrogenase 1 maturation protease TERM 2513 1889328 - 1889357 + G 71 -4.3 -4.56597 | gap 1, opp_overlap 1889336, overlap 1889329 1889332 1889333 CTATCGGCGATCGCT TTAATGTACGTCGG TTT CCGGCG-ACGTTGG TTTTTACAGACGGCA STM1790 1889069 - 1889473 + | hydrogenase-1 operon protein HyaE TERM 2514 1890048 - 1890070 + G 74 -3.2 -4.84017 | overlap 1890050 CAATTTGACCCAACT GCCGCTCAGC GAG GCCGATCGTC TTTTTCTGGCGCGTT STM1791 1889470 - 1890318 + | putative hydrogenase-1 protein TERM 2515 1891025 - 1891049 + G 100 -14.3 -3.83998 | TCTGCTACGTGGCCG CGAGCGTGAGG TGG CCTTGCGCTCG TTTGCTATCGGCTCA STM1792 1890393 - 1891937 + | putative cytochrome oxidase subunit I STM1793 1891949 - 1893085 + | putative cytochrome oxidase subunit II STM1794 1893098 - 1893187 + | putative periplasmic protein TERM 2516 1893194 - 1893225 + F 100 -10.9 -5.36364 | opp_overlap 1893197, overlap 1893197 CAACAATAAAGAGGT AAACCGGGGTCAG CGCCGT CTGACTCCGGTTA TTTTTATCTTTTTAC TERM 2517 1893222 - 1893197 - f 84 -10.4 -3.84931 | opp_overlap 1893194 1893197 CAATAAAGAGGTAAA CCGGGGTCAG CGCCGT CTGACTCCGG TTATTTTTATCTTTT TERM 2518 1893197 - 1893222 + F 100 -12.6 -4.69512 | opp_overlap 1893197, overlap 1893194 CAATAAAGAGGTAAA CCGGGGTCAG CGCCGT CTGACTCCGG TTATTTTTATCTTTT TERM 2519 1893295 - 1893307 + F 72 -6.3 -4.20136 | AACATTGATACATGT CGTTA TCA TAACG TTTACTTTTAGAGGT STM1795 1893531 - 1894856 + | putative glutamic dehyrogenase-like protein TERM 2520 1894897 - 1894880 - f 71 -7 -4.08945 | opp_overlap 1894880 ATCATTGCGCTAAAA TCCACG TCCCGG CGTGGA TTTTTTGTCTGTATA TERM 2521 1894880 - 1894897 + F 95 -7.7 -5.4492 | opp_overlap 1894880 ATCATTGCGCTAAAA TCCACGT CCCG GCGTGGA TTTTTTGTCTGTATA TERM 2522 1896163 - 1896130 - g 75 -6.5 -4.43189 | overlap 1896132 ATCAACTGGAGAAAA CCCTCGCCCGCGCCA GCGC TGCGGCGGGCGATCG GGCCAAAGCCTCGCA treA 1895070 - 1896782 + | trehalase TERM 2523 1896773 - 1896760 - T 78 -5.9 -4.8543 | CAACGCCGACAAAAA CGCCG TCTG CAGCG ACGCAGTAACGCGTG TERM 2524 1896825 - 1896798 - T 83 -14.2 -2.62184 | opp_overlap 1896793 1896791 CGCGTGTTTATAGTA GGTTGACCCGGT GCTG ACCGGGTCAACG CTTACACGTTCTGCA ymgE 1897099 - 1896845 - | putative transglycosylase-associated protein ycgR 1897268 - 1898002 + | putative inner membrane protein emtA 1898627 - 1898016 - | membrane-bound lytic murein transglycosylase E TERM 2525 1898482 - 1898492 + g 90 -8.2 -4.68593 | GGATCAACCCCCCAT GCCG CCC CGGC TTTTTCACTGATGGG TERM 2526 1898863 - 1898849 - g 75 -12.8 -2.55896 | opp_overlap 1898857, overlap 1898848 1898846 TGTATTAACCAACAG GCCGCG TTA CGCGGC GTTCAGCGCCTGACT TERM 2527 1898921 - 1898931 + G 70 -6.8 -4.11216 | overlap 1898906 GAGGTGATTCGTCGC CGCT TTC AGCG TTTTGCCGGTACGGA ldcA 1898798 - 1899712 + | L,D-carboxypeptidase A TERM 2528 1900291 - 1900304 + G 75 -3.7 -4.8543 | opp_overlap 1900280 1900291 CGAATCGGGAAGTAA CGACC CGAT GGCCG TTTTTCTGACCATTA TERM 2529 1900477 - 1900508 + G 74 -2.2 -4.98531 | gap 1, overlap 1900478 1900482 GCCCAGCGGCCTGTA TCCG-ATGCTGGCGC TCA GCGGCGGTATTCTGA TTTTTGCTTTGACGA ycgO 1899809 - 1901542 + | potassium/proton antiporter dadX 1902675 - 1901605 - | alanine racemase dadA 1903987 - 1902689 - | D-amino acid dehydrogenase small subunit TERM 2530 1903657 - 1903672 + g 76 -5.4 -4.70515 | gap 1, overlap 1903651 1903657 GACTATATTCCGCCA GG-CGCA CCA TGCGGCC TTTATTTTCCATATA TERM 2531 1903779 - 1903789 + g 70 -5.4 -4.42788 | AGCGGCGCATGGCGC TGGA ACA TCCA TTTTATCGCCTTCAG TERM 2532 1904224 - 1904234 + H 72 -3.2 -5.06451 | AAAGAAAAGTTTTCA CGAT CAA GTCG TTTTTTAACATGGTG TERM 2533 1905077 - 1905059 - g 75 -3.7 -4.87665 | TTTTATGGAGAAAAA CGCCCCG TTGCT CGAGCCG TGGCAGCGCGAAATT ycgB 1904316 - 1905842 + | hypothetical protein fadR 1906608 - 1905889 - | fatty acid metabolism regulator TERM 2534 1906844 - 1906863 + G 89 -9.2 -4.57569 | TGGAGATCTCATGGG GTCGCGCC ATGT GGCGCAAC TTTTTAGGCCAGTCG TERM 2535 1907158 - 1907169 + G 72 -2.2 -4.86385 | overlap 1907157 ATCTACTTTATGAAG CAGT TATT GCTG TTTATTTTTACCCGT nhaB 1906828 - 1908372 + | sodium/proton antiporter dsbB 1908514 - 1909044 + | disulfide bond formation protein B TERM 2536 1909066 - 1909051 - f 73 -10.4 -2.98823 | opp_overlap 1909051 GGTCGTTGATACACA CGCTCC TTCG GGAGCG TTTTTTTTGCCCGAA TERM 2537 1909051 - 1909066 + F 100 -10.4 -5.75342 | opp_overlap 1909051 GGTCGTTGATACACA CGCTCC TTCG GGAGCG TTTTTTTTGCCCGAA STM1808 1909153 - 1909494 + | putative cytoplasmic protein STM1809 1909739 - 1909566 - | putative cytoplasmic protein TERM 2538 1909898 - 1909882 - R 100 -10.1 -5.17054 | opp_overlap 1909882 AGAAGATGTAAAAAA CCGCCTG GCA CAGACGG TGCATCAGGCGGTTG STM1810 1910068 - 1909931 - | putative cytoplasmic protein ycgN 1910866 - 1910420 - | hypothetical protein ycgM 1911618 - 1910959 - | hypothetical protein TERM 2539 1911269 - 1911280 + g 77 -3.6 -5.10154 | TTGGCTTTTTCCCAG GGCT GTCC GGCC TTTTTCATTTTCCCT ycgL 1912000 - 1911668 - | putative cytoplasmic protein TERM 2540 1912196 - 1912209 + G 87 -8.1 -4.56597 | opp_overlap 1912196 1912195 1912193 TAGAAGACAAAATAG CGCAG GCTC CTGCG TTTTTAAAACACGCC minC 1912087 - 1912794 + | septum formation inhibitor TERM 2541 1913115 - 1913102 - g 71 -9.5 -3.5241 | overlap 1913100 GACCCGGGATAAAGA CGCGC TAAC GCGCG AAGGCGTCGCTAAGG TERM 2542 1913149 - 1913169 + G 74 -10.5 -3.57144 | opp_overlap 1913149 1913148 TGGACTCACTGAAAG CGATGGACT TTG AGTTCATCG TTTGCGACTCGCCGG minD 1912818 - 1913630 + | cell division inhibitor MinD TERM 2543 1913855 - 1913838 - g 76 -5.5 -4.72986 | opp_overlap 1913840 CAGCTTGAGCAAAAA GATGGTG ATAT CTCCATC CTTGAACTTAACGTA minE 1913634 - 1913900 + | cell division topological specificity factor MinE TERM 2544 1913927 - 1913956 + T 100 -15.3 -5.57054 | opp_overlap 1913934, overlap 1913934 GGAAAATTCCTGGAT TAAAAAAGGCAGA AGAA TCTGCCTTTTTTA TTTTTTTACATTATT TERM 2545 1913949 - 1913934 - T 100 -9 -5.14563 | opp_overlap 1913934 1913927 TCCTGGATTAAAAAA GGCAGA AGAA TCTGCC TTTTTTATTTTTTTA TERM 2546 1913934 - 1913949 + T 100 -9 -6.12458 | opp_overlap 1913934, overlap 1913927 TCCTGGATTAAAAAA GGCAGA AGAA TCTGCC TTTTTTATTTTTTTA rnd 1915149 - 1914022 - | ribonuclease D TERM 2547 1915081 - 1915127 + g 83 -12.4 -3.74626 | gap 2, opp_overlap 1915080 1915079 1915077 ATCTAAAGCAATAGC CGGAC-ATGCGC-GGACAGCCT CACAC AGGCTCGCCAGCGCATCGTCCG TTTCAATCATTTGGT TERM 2548 1915182 - 1915198 + r 73 -10.8 -3.0127 | opp_overlap 1915182 TCGCGCCAAAAAAAA CGCCGG CTTAA CCGGCG TCTCTCGTTAGCTGA TERM 2549 1915198 - 1915182 - R 100 -11.5 -5.75342 | opp_overlap 1915182 TCGCGCCAAAAAAAA CGCCGGC TTA ACCGGCG TCTCTCGTTAGCTGA fadD 1916907 - 1915222 - | long-chain-fatty-acid--CoA ligase TERM 2550 1917066 - 1917090 + r 100 -14.4 -4.71426 | opp_overlap 1917066 1917070, overlap 1917070 GTCTCTATGAATGCA GAAACAGCGG ACCAG CCGCTGTTTC TTTTATTGATAAAAC TERM 2551 1917090 - 1917066 - R 86 -14.4 -2.56596 | opp_overlap 1917066 1917070, overlap 1917070 GTCTCTATGAATGCA GAAACAGCGG ACCAG CCGCTGTTTC TTTTATTGATAAAAC TERM 2552 1917086 - 1917070 - R 77 -9.4 -3.98826 | opp_overlap 1917070 1917066, overlap 1917066 CTATGAATGCAGAAA CAGCGG ACCAG CCGCTG TTTCTTTTATTGATA TERM 2553 1917070 - 1917086 + r 93 -9.4 -4.90302 | opp_overlap 1917066 1917070, overlap 1917066 CTATGAATGCAGAAA CAGCGG ACCAG CCGCTG TTTCTTTTATTGATA slp 1917693 - 1917112 - | putative outer membrane protein yeaZ 1918460 - 1917765 - | putative molecular chaperone yoaA 1920428 - 1918518 - | putative DNA helicase yoaB 1920559 - 1920903 + | putative translation initiation inhibitor TERM 2554 1920965 - 1920931 - T 71 -7.2 -4.11216 | gap 2 TCTTCATCCTCAAAA CGCGCC-ACTAT-CCG TTCGC CGGTATGGTTGGCGCG AAGTTCGCCCGCCAC yoaH 1921088 - 1920909 - | hypothetical protein pabB 1921169 - 1922533 + | para-aminobenzoate synthase component I TERM 2555 1922735 - 1922710 - g 70 -9.7 -3.35046 | gap 1, overlap 1922708 TCATTTGCGCAAACA CGCCGG-ACAGG TCG CCTTTCCCGGCG GGGCCGTGGACAGTA yeaB 1922537 - 1923115 + | hypothetical protein TERM 2556 1923608 - 1923632 + G 89 -9.3 -4.63486 | overlap 1923602 GTAATGAACCCGCTA CCGTGGATATT GAT AGTATCCCCGG TTTTATTCGCGACGT sdaA 1923379 - 1924743 + | L-serine deaminase I/L-threonine deaminase I TERM 2557 1924760 - 1924788 + F 100 -13.9 -5.10968 | overlap 1924761 CGCCGTTTCCCCTCC CTTCGCCCATCTG CTA CGGATGGGCGAAA TTTTTATCTCTTCCT TERM 2558 1924761 - 1924787 + F 100 -17.4 -3.64954 | overlap 1924760 GCCGTTTCCCCTCCC TTCGCCCATCTG CTA CGGATGGGCGAA ATTTTTATCTCTTCC TERM 2559 1925539 - 1925514 - g 89 -2.7 -5.63103 | gap 1 CCGGAATTAAAAAAA GATGAAGAGC GTTACCA GCT-TTCATC GCGACATTTCCCTTT TERM 2560 1926454 - 1926402 - g 81 -12.5 -3.09635 | opp_overlap 1926401 1926439, overlap 1926449 ATGCCCATTAGCGAA TTTCCACAGTGGCTGGCGGGCAGCG CGC CGCCGCCCGCCCGGCATAACGGACA GATTATGTCCGCGAT STM1827.S 1924881 - 1926482 + | putative diguanylate cyclase/phosphodiesterase yoaE 1928060 - 1926504 - | putative inner membrane protein STM1829 1928383 - 1928048 - | putative cytoplasmic protein TERM 2561 1928969 - 1928941 - g 100 -9.4 -4.86033 | overlap 1928943 AAACCGGTAGAAAAA GCCGCGCCAGCG CCAGT CGCCGCCGCGCC AAAAGCGGCCGCACC TERM 2562 1929418 - 1929408 - g 78 -6.8 -4.59853 | overlap 1929397 1929417 CGAAGCCTTTAAAAA GCTC AAC GAGC GCGGCATCGAGCTTG manX 1928533 - 1929501 + | mannose-specific enzyme IIAB manY 1929554 - 1930354 + | mannose-specific enzyme IIC TERM 2563 1930413 - 1930403 - g 79 -3.2 -5.28778 | overlap 1930404 ACCACCGAGAAAAAA CTCA CTC CGAG CGATATTCGCGGCGT TERM 2564 1930789 - 1930813 + G 72 -4.1 -4.81734 | opp_overlap 1930788, overlap 1930788 AGGTATTGCAATGAG CGGCAGCCTGC TTG GTCCGCTGCTG TTTTTCATCCTGTTT manZ 1930358 - 1931218 + | mannose-specific PTS system protein IID TERM 2565 1931253 - 1931234 - f 71 -10.6 -2.62184 | opp_overlap 1931235 GGCTGTTGTACACTA CCGGGGCC AAAC GGCCCCGT TTTTTATTTCTCTGG TERM 2566 1931235 - 1931252 + F 100 -14.1 -5.76237 | opp_overlap 1931234 GCTGTTGTACACTAC CGGGGCC AAAC GGCCCCG TTTTTTATTTCTCTG STM1833 1931276 - 1931746 + | hypothetical protein TERM 2567 1931785 - 1931800 + F 78 -6.2 -4.66537 | opp_overlap 1931785 TATTTCGAATCATAA TATAGC TAAG GCTATA TTTTCTATTGACCAA TERM 2568 1932675 - 1932697 + G 91 -12 -4.14392 | opp_overlap 1932674 1932673, overlap 1932676 GTACTGATAGGAATT GGCGTCCAGA TCC TCTGGACGCA TTTTCACGGTTAACG TERM 2569 1932676 - 1932696 + G 93 -15.5 -3.08314 | opp_overlap 1932674 1932673, overlap 1932675 TACTGATAGGAATTG GCGTCCAGA TCC TCTGGACGC ATTTTCACGGTTAAC yebN 1932090 - 1932710 + | hypothetical protein rrmA 1933516 - 1932707 - | 23S rRNA methyltransferase A STM1836 1935327 - 1933582 - | putative penicillin-binding protein 3 TERM 2570 1934999 - 1935028 + g 71 -10.7 -3.28712 | gap 1, opp_overlap 1934992 1934996, overlap 1935000 1935002 CTGAGAGACAGATGC AGGGCGCTGGCCAG CGC CTG-CCAGCGCTCA TTGTAGCCAACGCCG TERM 2571 1935000 - 1935027 + g 81 -14.2 -2.57132 | gap 1, opp_overlap 1934992 1934996, overlap 1934999 1935002 TGAGAGACAGATGCA GGGCGCTGGCCAG CGC CTG-CCAGCGCTC ATTGTAGCCAACGCC TERM 2572 1935002 - 1935025 + g 79 -13.2 -2.82623 | gap 1, opp_overlap 1934992 1934996, overlap 1935000 1934999 AGAGACAGATGCAGG GCGCTGGCCAG CGC CTG-CCAGCGC TCATTGTAGCCAACG TERM 2573 1935262 - 1935241 - G 71 -7.3 -3.9461 | CCGCCCTAACAACAA TGCCATACT GAGC AGAATGGCA GTGCAAAGTAGTGCA TERM 2574 1935413 - 1935397 - R 85 -3.7 -5.47914 | AAAAACCAGAAAAAA CAATGCT AAT AACATCG CGCCTTTGCAACAAA TERM 2575 1935480 - 1935498 + r 87 -10.2 -4.128 | opp_overlap 1935480 ATATTGAATTAAAAA GCCCCGCT TTT AGCGAGGC TTTATATCTGAGGCT TERM 2576 1935498 - 1935480 - R 100 -12.4 -4.89009 | opp_overlap 1935480 ATATTGAATTAAAAA GCCCCGCT TTT AGCGAGGC TTTATATCTGAGGCT TERM 2577 1935570 - 1935554 - R 70 -9.5 -2.94099 | overlap 1935569 GGTGTCGATCAGATA GCTGTTA CGT TAACAGC AGCCGGACCTTTCTG cspC 1935756 - 1935547 - | cold shock-like protein CspC TERM 2578 1935611 - 1935629 + g 70 -6.7 -4.09739 | overlap 1935612 ATTTCGAACTCAACG TTCTGGC CTTCA GCCAGAG TTTTGAAACCATTGC yobF 1935912 - 1935769 - | putative cytoplasmic protein TERM 2579 1936274 - 1936261 - R 71 -3.9 -4.88288 | CAAAATAATAGAAAA GAAAA GCGA TTTTC GGCACCGCTTTTTGT STM1839 1936848 - 1936561 - | hypothetical protein TERM 2580 1936619 - 1936635 + g 77 -3.5 -5.00765 | overlap 1936622 GGTTCGCTTGCCGCT GTTGCGG GTT CCGCTTC TTTTTCTGGTTCGTT TERM 2581 1936622 - 1936632 + g 87 -8.2 -4.58563 | overlap 1936619 TCGCTTGCCGCTGTT GCGG GTT CCGC TTCTTTTTCTGGTTC yobG 1937062 - 1936919 - | hypothetical protein STM1841 1937220 - 1937459 + | hypothetical protein TERM 2582 1937640 - 1937618 - T 100 -9.9 -5.626 | opp_overlap 1937618 GATGTTATAAAAAAA GCAGCTACA TTTTT CGTAGCTGC TTTTTTTTAACGTCA TERM 2583 1937618 - 1937640 + T 100 -9.2 -5.78622 | opp_overlap 1937618 GATGTTATAAAAAAA GCAGCTAC ATTTTTC GTAGCTGC TTTTTTTTAACGTCA kdgR 1938462 - 1937671 - | putative transcriptional repressor TERM 2584 1938666 - 1938648 - g 74 -2.2 -5.09895 | overlap 1938650 1938651 TACTTATGGAAAAAA CACGGGCC GAT GGCCTGCC CCTCCCGCAGAGATA TERM 2585 1938664 - 1938650 - g 70 -7 -4.17608 | overlap 1938648 1938651 CTTATGGAAAAAACA CGGGCC GAT GGCCTG CCCCTCCCGCAGAGA TERM 2586 1939095 - 1939124 + G 73 -6.4 -4.45485 | gap 2, overlap 1939096 TCGTCGCCGTCTCTT CCGCCGCGG-G-TC CGAC GATCGCCGCGGCGA TTTTATCCATCTCAT STM1843 1938638 - 1940011 + | putative transport protein TERM 2587 1940034 - 1940017 - T 100 -12.7 -5.42259 | opp_overlap 1940017 TCAGGCGTAAAAAAA GCGCGTC ATTC GACGCGC TTTTCATACTTGCCA TERM 2588 1940017 - 1940034 + T 95 -12.7 -4.3534 | opp_overlap 1940017 TCAGGCGTAAAAAAA GCGCGTC ATTC GACGCGC TTTTCATACTTGCCA htpX 1940940 - 1940059 - | heat shock protein HtpX TERM 2589 1940490 - 1940519 + g 70 -8.7 -3.73224 | gap 1, opp_overlap 1940498 GAATCAACGTCATCG TCA-CCATATCGCC ATT GGCAATATGGCTGA TTTCATGCGCAATGA TERM 2590 1941126 - 1941105 - R 100 -13.1 -6.06723 | opp_overlap 1941086 1941105 CTTGTTAAAAAAAAA CAGGCACAA TTTT TTGTGCCTG TTTAGCGTTACTTAT TERM 2591 1941105 - 1941126 + r 95 -13.1 -3.69836 | opp_overlap 1941105, overlap 1941086 CTTGTTAAAAAAAAA CAGGCACAA TTTT TTGTGCCTG TTTAGCGTTACTTAT TERM 2592 1941151 - 1941163 + r 86 -4.7 -5.61881 | ACTTATTGGCTGCCG CCTGC TCC GCTGG TTTTTCTTTTTCAAG prc 1943182 - 1941134 - | carboxy-terminal protease TERM 2593 1941313 - 1941325 + g 73 -9.1 -3.91564 | opp_overlap 1941306 CGTTAATACGCGCCA GACGC AGA GCGTC TTCTTCATTGTTCTC TERM 2594 1942007 - 1942036 + g 75 -5.7 -4.63542 | ACCGCCGTTTGAACG CAGATCGATAACG ATGC TGTTAACGTTCTG TTTTTCCAGCTTCTG TERM 2595 1942831 - 1942814 - G 74 -10.5 -3.60792 | opp_overlap 1942814 1942814 CTGGTAACGTTCAAA CCGGCGC TTTT GCGCCAG GTTATAAAGATCGTA TERM 2596 1943151 - 1943126 - G 83 -14.8 -2.72344 | TTCCACGGCGAAGGA CTGGCCTGCT AATGCA AGCAGGCCAG CTAACGCGGTAAGCC proQ 1943888 - 1943202 - | putative solute/DNA competence effector TERM 2597 1943396 - 1943363 - G 74 -7.3 -4.1043 | gap 1, opp_overlap 1943363 1943364 1943392 1943394, overlap 1943364 CTGAAATATCAGAAA CCGGCGTGTGCTTCTC TTC GCGAGGCGCACG-CGG CGCTTTCGTCGTCGG TERM 2598 1943450 - 1943492 + g 85 -9 -4.40561 | overlap 1943447 CAGCGCCTTCTTTAC GACGCGCTACCGGGCGAG GTTTACG CTCGCGTCGCGGCGCGTC TTCTTTTTCGCCAGC TERM 2599 1943511 - 1943525 + g 85 -4.9 -5.17576 | TTTTTCGCCAGCCGC CGCGG CAGCT TCGCG TTTTTTCGCTTGCTG TERM 2600 1943958 - 1943939 - R 81 -12.2 -3.15996 | overlap 1943937 CAGCAGGCATGAACA GGCGTCAT TATA ATGACGCC ATCAGTAATTGCTAC yebR 1944570 - 1943986 - | putative nucleotide-binding protein TERM 2601 1945547 - 1945560 + GH 75 -3.7 -4.83615 | opp_overlap 1945544, overlap 1945544 CAGCAGCAATATCGC CGTCG CCGC CGTCG TTTTTATCGCCAGTA yebS 1944612 - 1945895 + | putative inner membrane protein TERM 2602 1946180 - 1946238 + GF 71 -9.5 -3.14211 | opp_overlap 1946180 1946185, overlap 1946163 1946167 1946210 CGTTGCGCGAAGAGA CGCAATTCTGGCTGGTGACGCCC-AAAGC CTC GCTGGCGGGCGTTTCCGGCCTGGAT-GCG TTGGTCGGCGGGAAT TERM 2603 1947324 - 1947354 + GF 74 -11.1 -2.79796 | overlap 1947326 TATTTTACCCGGTAC GAGCGGGAAGATG AAATC CACCTACCCGCTC TATGCTAACCTGGAA STM1849 1945858 - 1948497 + | putative inner membrane protein TERM 2604 1948529 - 1948504 - f 77 -11.8 -2.85297 | opp_overlap 1948504 1948505 1948518, overlap 1948499 1948501 CCACGTTAAACACCA GGCTCCGGCG TACTCG CGCCGGAGCG TTTTATGCTACACTG TERM 2605 1948504 - 1948529 + F 100 -12.5 -4.46926 | opp_overlap 1948499 1948504 1948501, overlap 1948505 1948518 CCACGTTAAACACCA GGCTCCGGCGT ACTC GCGCCGGAGCG TTTTATGCTACACTG TERM 2606 1948505 - 1948528 + F 100 -16 -3.27674 | opp_overlap 1948499 1948504 1948501, overlap 1948504 1948518 CACGTTAAACACCAG GCTCCGGCGT ACTC GCGCCGGAGC GTTTTATGCTACACT TERM 2607 1949220 - 1949210 - g 86 -6.8 -5.02074 | TGATGCGCTAAAAAA CTGG TCG CCAG AAAGCAATCTGGATA TERM 2608 1949699 - 1949710 + G 75 -5.8 -4.58395 | overlap 1949670 1949668 GATTGAATCACTGAT CGGA AAAG TCCG TTTTTCCCGGCTCGG yebU 1948575 - 1950014 + | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 2609 1950146 - 1950157 + G 74 -7.2 -4.13767 | opp_overlap 1950139 GATGAAAACCAGTGT GCGC ATTG GCGC TTTTGAAATCGACGA TERM 2610 1950228 - 1950238 + G 70 -6.8 -4.128 | opp_overlap 1950228, overlap 1950224 ACAATCCCCTGTAAA TCCG ATC CGGA TTTATGTATGCAACT STM1851 1950129 - 1950368 + | putative cytoplasmic protein TERM 2611 1950377 - 1950398 + F 78 -6.5 -4.55759 | opp_overlap 1950377 1950380, overlap 1950380 TGCCTGACTCAAAAA GAACCCGTC GCCA GGCGGGTTA TTTATTCTTCCTTTT TERM 2612 1950395 - 1950380 - f 72 -6 -4.44608 | opp_overlap 1950380 1950377, overlap 1950377 CTGACTCAAAAAGAA CCCGTC GCCA GGCGGG TTATTTATTCTTCCT TERM 2613 1950380 - 1950395 + F 79 -8.2 -4.34486 | opp_overlap 1950377 1950380, overlap 1950377 CTGACTCAAAAAGAA CCCGTC GCCA GGCGGG TTATTTATTCTTCCT yebW 1950479 - 1950670 + | putative inner membrane lipoprotein pphA 1951339 - 1950689 - | serine/threonine protein phosphatase 1 TERM 2614 1950789 - 1950762 - G 70 -6.9 -4.08767 | overlap 1950763 1950779 TGTACGTTGGCAAAA TCCATGCGCCG ACGCAA CGGCGTATGGC CAAACCAAAAATGAT TERM 2615 1951003 - 1950988 - G 84 -3.2 -5.42164 | overlap 1950989 GACAAAGAATAAAAA GCGC TTCAGCTT GCGC AGCGTGTTCAGCCGT TERM 2616 1951527 - 1951478 - R 100 -19.4 -4.66318 | opp_overlap 1951512, overlap 1951480 1951483 ATCATCGCAATAAAA TATAACTGGCTGCGCCAGGGGA GGGTTA TCCCCTGGCGCAGCGAGCTACT CACTATCGCCTGTTC TERM 2617 1951525 - 1951480 - R 100 -24.2 -3.94438 | opp_overlap 1951512, overlap 1951478 1951483 CATCGCAATAAAATA TAACTGGCTGCGCCAGGGGA GGGTTA TCCCCTGGCGCAGCGAGCTA CTCACTATCGCCTGT TERM 2618 1951522 - 1951483 - R 100 -23.7 -4.0865 | opp_overlap 1951512, overlap 1951480 1951478 CGCAATAAAATATAA CTGGCTGCGCCAGGGGA GGGTTA TCCCCTGGCGCAGCGAG CTACTCACTATCGCC STM1854 1951727 - 1951563 - | putative inner membrane protein TERM 2619 1951939 - 1951908 - R 80 -6.6 -4.75288 | overlap 1951910 TTATATTAAAATAAA GATGACGACGTTTT GTTA AAAGCGTCGCCATA AAAACGAATATATAG TERM 2620 1951937 - 1951910 - R 77 -9.2 -3.98052 | overlap 1951908 ATATTAAAATAAAGA TGACGACGTTTT GTTA AAAGCGTCGCCA TAAAAACGAATATAT sopE2 1952734 - 1952012 - | type III-secreted effector protein TERM 2621 1952243 - 1952258 + g 84 -3.2 -5.36441 | CGCCCCTGCCCCACC TGGAGT AAAT ACGCCA TTTTTTATCTCCCCA TERM 2622 1953258 - 1953248 - H 76 -2.4 -5.41143 | TAGTGGTCAAAAAAA CGCG CTA CGAG AAATAATCAGTAACA TERM 2623 1953767 - 1953749 - g 86 -3.8 -5.41359 | opp_overlap 1953760, overlap 1953750 1953759 1953760 AATTAAACCAAAAAA CTCGACAA TAC TGGTCGAA AGACAACCAATTATT STM1856 1953418 - 1953813 + | putative cytoplasmic protein TERM 2624 1953984 - 1953968 - f 74 -10.9 -2.80074 | opp_overlap 1953966, overlap 1953963 TTCTCGACAACAGCA TCTCCTG GTG CAGGAGA AATGATATTCAAAGC TERM 2625 1954141 - 1954130 - f 79 -4.4 -5.15969 | GCGTAATCGAAAAAA CATC TGGA GATG TATGAGCAAGGATGA STM1856.1N 1954143 - 1954619 + | hypothetical protein STM1857 1955426 - 1955007 - | putative acetyltransferase STM1858 1955796 - 1956065 + | putative cytoplasmic protein STM1859 1956198 - 1956371 + | putative cytoplasmic protein TERM 2626 1956543 - 1956522 - f 79 -10.1 -3.76224 | TGCCCAGTTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA TERM 2627 1956576 - 1956560 - f 76 -5.1 -4.78839 | AACTCGATAATAAAA CGGCT CATCGCC AGCCG CCAGTTCTGGATCGG TERM 2628 1957243 - 1957253 + F 79 -8.2 -4.24204 | TGGGGTACAGCGCAT CCGG TTG CCGG TTTTGCCTCTCAGTG TERM 2629 1958767 - 1958710 - f 73 -11.5 -2.59051 | gap 1, opp_overlap 1958763, overlap 1958709 TGAACAAGTAAAATC CGCCGCAA-CTGGCAACCATTCAATACT CGC ACTATCGAACGATCGCCAGCTTGCCGCA GCCCGTTCTTGCATA pagO 1959507 - 1960421 + | integral membrane protein STM1863 1960554 - 1960712 + | putative inner membrane protein TERM 2630 1960881 - 1960892 + G 86 -3.6 -5.28942 | GCTGGCCTCATCATC GCCG GTTT TGGC TTTTTATTTAACCTC TERM 2631 1961312 - 1961302 - g 70 -6.8 -4.07568 | opp_overlap 1961310, overlap 1961304 TTGCCTTTCTGAAAA CAGG CCT CCTG ACGAGGACAGTTCTC STM1864 1960722 - 1961336 + | putative inner membrane protein TERM 2632 1962006 - 1961972 - f 93 -11.7 -3.67976 | gap 1, opp_overlap 1961976 TTCATCAAGGTTAAA GGAACAAAGAGCT-CT TTAA AGTAACTCTTTGTTCC ATTACGATAGTTTAA pagK 1963179 - 1963379 + | PagK TERM 2633 1963460 - 1963426 - T 75 -10.9 -2.95476 | overlap 1963428 ATCAGTTATGACAGA CAGGCCTTCTTCATA TTTGC TATAAATAAGGCCTG AGCTTTCCTGACAAA mig-3 1964357 - 1963476 - | phage-tail assembly-like protein TERM 2634 1963684 - 1963700 + g 87 -13.7 -3.29096 | GCTTCACGAAGTCTG GCTGCGG CCT CCGCAGC TTCATCATTCATCCA STM1868.1N 1964775 - 1964512 - | hypothetical protein STM1868A 1965083 - 1965250 + | lytic enzyme TERM 2635 1965493 - 1965522 + T 71 -7.9 -3.99985 | opp_overlap 1965493 TTTTTTACAGCAATA TTACAGGGGGAGT TTCA ATGCCTCCTGTAA TTATTTGACTCTCTC STM1869 1966040 - 1965507 - | phage-tail assembly-like protein STM1869A 1966381 - 1966094 - | hypothetical protein TERM 2636 1966194 - 1966168 - G 75 -3.6 -4.87665 | opp_overlap 1966183, overlap 1966169 CTTTAGTCACAAAAA GCCACGCTGC GGATCGG GCGGCATGAC GTTCTAGCTCAAGCT STM1870 1966514 - 1967008 + | RecE-like protein TERM 2637 1967836 - 1967817 - T 71 -3.5 -4.82901 | GCGGCTGTACAAAAA CGAGCAC GGCGAG GTGTTCG CCCAAAAACTCCTGG TERM 2638 1968087 - 1968058 - T 90 -7.3 -5.33026 | gap 1, overlap 1968060 TAATCTAAATAAAAA GAGACCGAATAC GATTCCT GTATTCGGTC-C AGGGAAATGGCTCTT TERM 2639 1968086 - 1968060 - T 91 -11 -4.2793 | overlap 1968058 ATCTAAATAAAAAGA GACCGAATAC GATTCCT GTATTCGGTC CAGGGAAATGGCTCT STM1872 1968238 - 1968119 - | putative cytoplasmic protein TERM 2640 1968250 - 1968277 + r 100 -11.4 -5.45652 | opp_overlap 1968250 TCAGAGATAAAAAAA CCGTAAGCCTTT TCGT GAAGGTTTACGG TTTTTTATTAAAAAT TERM 2641 1968277 - 1968250 - R 100 -8.5 -5.76633 | opp_overlap 1968250 TCAGAGATAAAAAAA CCGTAAGCCTT TTCGTG AAGGTTTACGG TTTTTTATTAAAAAT STM1873 1968649 - 1968296 - | hypothetical protein STM1874 1969541 - 1968666 - | putative inner membrane protein yobA 1969916 - 1969542 - | hypothetical protein holE 1970054 - 1970284 + | DNA polymerase III subunit theta STM1877 1970392 - 1971048 + | putative amidohydrolase exoX 1971072 - 1971770 + | exodeoxyribonuclease X TERM 2642 1971797 - 1971771 - T 74 -8.7 -3.89291 | gap 1, opp_overlap 1971773, overlap 1971762 GGAACACCACAATAA CCCGCGAC-GCT CACA AGCCGTTGCGGG CGCGCGTCTATGCGC ptrB 1973856 - 1971805 - | protease 2 yebE 1974728 - 1974069 - | putative inner membrane protein yebF 1975175 - 1974822 - | hypothetical protein TERM 2643 1974968 - 1974984 + g 91 -3.6 -5.55664 | TAACCCACGCGACCG GGTCAG CCTGC CCGACC TTTTTTTGGTCGTCG yebG 1975533 - 1975243 - | DNA damage-inducible protein YebG TERM 2644 1976737 - 1976751 + G 74 -11.4 -3.20345 | overlap 1976734 TGGTAAGCCTGAGAT CGACGG CAC CCGTCG TCTTGGTGTAGCGTT TERM 2645 1976822 - 1976812 - g 74 -4.6 -4.76312 | overlap 1976813 1976814 GATAAGAGCGAAAAA GGCC GTC AGCC GCGTGACGGTAAAAG purT 1975664 - 1976842 + | phosphoribosylglycinamide formyltransferase 2 TERM 2646 1976836 - 1976873 + T 80 -6.4 -4.83615 | gap 2, opp_overlap 1976837 1976838, overlap 1976837 1976837 CCGCGTGACGGTAAA AG-GCTAATG-CGCCATC GCCT GATGGCGACGTTAGCGCA TTTTTATCAGACCTG TERM 2647 1976871 - 1976837 - T 73 -7.9 -4.13767 | gap 1, opp_overlap 1976836 1976837 1976837, overlap 1976838 CGCGTGACGGTAAAA GGCTAATG-CGCCATC GCCT GATGGCGACGTTAGCG CATTTTTATCAGACC TERM 2648 1976837 - 1976872 + T 75 -9.9 -3.49687 | gap 2, opp_overlap 1976837 1976838, overlap 1976837 1976836 CGCGTGACGGTAAAA G-GCTAATG-CGCCATC GCCT GATGGCGACGTTAGCGC ATTTTTATCAGACCT TERM 2649 1976870 - 1976838 - T 75 -11.4 -3.08046 | gap 1, opp_overlap 1976837 1976837 1976836, overlap 1976837 GCGTGACGGTAAAAG GCTAATG-CGCCATC GCCT GATGGCGACGTTAGC GCATTTTTATCAGAC eda 1977583 - 1976942 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase edd 1979432 - 1977621 - | phosphogluconate dehydratase TERM 2650 1979587 - 1979562 - R 89 -5.4 -5.80364 | gap 1 AGTGTAATAAAAAAA GCCTCGCA-GG TGAAT CCACACGAGGC TTAAAAGTGCAAAAA zwf 1981142 - 1979667 - | glucose-6-phosphate 1-dehydrogenase TERM 2651 1981102 - 1981068 - G 95 -15 -3.22388 | opp_overlap 1981073 CAGGGAAGGCAGCAA TTTCCGGCGCGCCAGG TCG CCTTTCGCGCCGAAAA TGACCAGGTCACATG yebK 1981484 - 1982353 + | DNA-binding transcriptional regulator HexR TERM 2652 1982567 - 1982533 - g 71 -12.2 -2.52543 | opp_overlap 1982545, overlap 1982542 1982545 1982555 AGGCCCGGCAACTGA CCGCGATAACAACCTT GAG AAGGTTATCGCCGCGG GCGCAAACGTAGTAC pykA 1982477 - 1983919 + | pyruvate kinase TERM 2653 1983965 - 1983990 + T 100 -14.9 -4.49958 | opp_overlap 1983969, overlap 1983969 CAGGGTTTGTCAGCA TAAAGCCTCTC TTAC GAGAGGCTTTA TTTATTTGATGGGAT TERM 2654 1983986 - 1983969 - T 87 -11.3 -3.96148 | opp_overlap 1983965 1983969 GTTTGTCAGCATAAA GCCTCTC TTAC GAGAGGC TTTATTTATTTGATG TERM 2655 1983969 - 1983986 + T 100 -11.3 -4.80736 | opp_overlap 1983969, overlap 1983965 GTTTGTCAGCATAAA GCCTCTC TTAC GAGAGGC TTTATTTATTTGATG msbB 1984963 - 1983992 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2656 1984616 - 1984632 + g 86 -3.7 -5.40072 | overlap 1984617 CTCCAGACCTTCCCA GTCAACA CGC TGTTGAA TTTTTTTCGGACCGC TERM 2657 1985063 - 1985041 - R 100 -13.4 -5.8901 | opp_overlap 1985041 1985062 ACACAAAACAAAAAA GCCGGCACAC ATC GCGTACCGGC TCTGTCAGCGCATTT yebA 1986399 - 1985080 - | hypothetical protein znuA 1987359 - 1986415 - | high-affinity zinc transporter periplasmic component TERM 2658 1986942 - 1986957 + g 76 -5.4 -4.77036 | TATATTCGCCGTGAT GGTGAT GTAC GTCACC TTTTTCCTCATCGGC TERM 2659 1987812 - 1987798 - g 73 -5.6 -4.65895 | GCGCCCATGCAAAAA CTCTCC GGC GGTGAG ACACAGCGCGTACTG znuC 1987438 - 1988193 + | high-affinity zinc transporter ATPase TERM 2660 1988456 - 1988468 + G 80 -10.5 -3.82202 | CTTACTGGGCATTAT GGCGC ACA GCGCC TTATCTTTAGGACTG znuB 1988190 - 1988975 + | high-affinity zinc transporter membrane component ruvB 1990064 - 1989054 - | Holliday junction DNA helicase B TERM 2661 1990099 - 1990079 - R 90 -13.9 -3.32844 | opp_overlap 1990072 1990071 TCCTTTACCTCATAA CGCGGCGCG TAA CGCGTCGCG AATCAGTGTTTCACT ruvA 1990684 - 1990073 - | Holliday junction DNA helicase motor protein TERM 2662 1990753 - 1990738 - H 79 -7.6 -4.47611 | TATCATAAAAAAAGA CTGGAT GTTT ATCCAG ATGAAAAACACGTTA STM1896 1991104 - 1992000 + | putative cytoplasmic protein TERM 2663 1992049 - 1992076 + F 83 -10.6 -3.73402 | opp_overlap 1992048 1992044 ATTAATTGAATTAAG CCGCCTCTGC CGTTATAT GCAGAGGTGG TTTAATGGGAAATGT yebB 1992627 - 1993226 + | hypothetical protein ruvC 1993749 - 1993228 - | Holliday junction resolvase yebC 1994526 - 1993786 - | hypothetical protein TERM 2664 1994566 - 1994546 - R 79 -3.2 -5.40474 | gap 1, opp_overlap 1994547, overlap 1994547 ATTTCCTCAAAAAAA GCG-CGCCT TTTC AGGCGACGT TAATGACAAACTCTT ntpA 1995008 - 1994556 - | dATP pyrophosphohydrolase aspS 1996883 - 1995111 - | aspartyl-tRNA synthetase yecD 1997208 - 1997774 + | hypothetical protein TERM 2665 1997934 - 1997946 + G 80 -4.8 -5.01042 | opp_overlap 1997934 GGTATGCGCAAACTA CGGA CGATT TCCG TTTTTGCTTTAAATT TERM 2666 1998433 - 1998456 + G 74 -2.2 -4.98672 | opp_overlap 1998428, overlap 1998433 GTTGCAGAAACTCCC GCAGTGGCGG CAGA CCACCACGCC TTTTCTGTTTTTACA yecE 1997771 - 1998589 + | hypothetical protein TERM 2667 1998725 - 1998748 + G 88 -11 -4.11484 | gap 1, opp_overlap 1998722 CTTGCGAATGCAGTA CCG-TGTCGCC TAT GGCGACGGCGG TTTTAGCGAATTGCA yecN 1998642 - 1999037 + | putative inner membrane protein TERM 2668 1999036 - 1999052 + F 71 -3.6 -4.85782 | overlap 1999037 TTTTCTCCCTGTATT AGCGCA CAATA TGCGCC TTTATTTTTCCCGGA TERM 2669 1999743 - 1999723 - g 74 -6.7 -4.27886 | opp_overlap 1999724, overlap 1999724 GTGGAAACACATAAA GCGCGCCTG CGT CAGGCGGGT TTCGAACACAGTGAA TERM 2670 1999724 - 1999742 + G 74 -10.2 -3.53444 | opp_overlap 1999723 1999724 TGGAAACACATAAAG CGCGCCTG CGT CAGGCGGG TTTCGAACACAGTGA yecO 1999078 - 1999821 + | putative SAM-dependent methyltransferase yecP 1999818 - 2000789 + | putative enzyme TERM 2671 2000902 - 2000869 - T 86 -10.9 -3.794 | overlap 2000870 CGGCAACGCAGCAAA TCCCCGGGAACGTAG GTAG CTACGTGGCCGGGGT GCGCGAGGCGGCCAA TERM 2672 2000901 - 2000870 - T 87 -14.4 -2.87319 | overlap 2000869 GGCAACGCAGCAAAT CCCCGGGAACGTAG GTAG CTACGTGGCCGGGG TGCGCGAGGCGGCCA TERM 2673 2000977 - 2000953 - T 100 -10 -5.71983 | TGAAGGAGAAAAAAA GGCCCCTG TTGAATTGG CAGGGGCC TGGTACGAGCAAGCA cutC 2001771 - 2001025 - | copper homeostasis protein CutC TERM 2674 2001308 - 2001318 + g 90 -8.2 -4.83169 | ATTGATAAACCTTGC GCCG CAT CGGC TTTTTGTCCGGAAGT TERM 2675 2001421 - 2001443 + g 71 -4.6 -4.67173 | overlap 2001422 GCGGTGGAATGTCAC CGCCAGCGGC CCG GCCGCCGCCA TTATTTTTTCCATTC TERM 2676 2001595 - 2001581 - G 86 -7.8 -4.7373 | TCAGTGTAGTAAAAA TCCCCG CCG CGAGGA CGAATAATCGGATGT TERM 2677 2001683 - 2001648 - G 100 -17.7 -3.02144 | opp_overlap 2001638 2001656 2001679, overlap 2001656 GTACGCTGCGTAAGA CGCCGAAAGAAGGCG TAAGCC CCCCTTCTTTCGGCG CGGCGCACAGTTCGA yecM 2002360 - 2001791 - | hypothetical protein TERM 2678 2002557 - 2002574 + H 71 -9.8 -3.15544 | opp_overlap 2002553 2002552 AATTCTTAAACTGGC GCGGGC AATACA GCCCGC TTCATAAACGTAAGG argS 2002597 - 2004330 + | arginyl-tRNA synthetase TERM 2679 2004354 - 2004382 + F 100 -14.6 -5.06414 | opp_overlap 2004351 2004348 TCGTTAACATCATCA GGCCTGACTCCG GATAA CGGACTCAGGCC TTTTTATTGCCACAG TERM 2680 2005661 - 2005676 + G 74 -3.2 -4.9792 | CACTAAAGCGATTGA GGAATC TGCG GATACC TTTTTCTATCAGGTC TERM 2681 2005843 - 2005830 - g 78 -2.3 -5.24129 | opp_overlap 2005833, overlap 2005831 2005832 CGGGTCCATAAAAAA GCCTG GTAT CAGGG CGATACCATTTCTGT TERM 2682 2005833 - 2005851 + G 71 -7.5 -4.04206 | opp_overlap 2005831 2005830 2005832 GTCCATAAAAAAGCC TGGTATC AGGGC GATACCA TTTCTGTCGGCATCG TERM 2683 2006313 - 2006288 - g 86 -10.3 -4.09685 | CTTGATTCTGGAAAA CGGCGGAAGCG ACGG CGTTACCGCCG CACCCATCATGCGAA STM1910 2004519 - 2006390 + | putative penicillin-binding protein STM1911 2007583 - 2006444 - | putative cytoplasmic protein flhE 2008212 - 2007820 - | flagellar protein flhA 2010290 - 2008212 - | flagellar biosynthesis protein FlhA TERM 2684 2008700 - 2008684 - G 74 -10.9 -3.5393 | AGGACTTTGTGTAAA GTCGTGA GGG TCACGAC GCCGGGGACCAGATC TERM 2685 2009279 - 2009291 + g 80 -4.7 -5.06414 | overlap 2009273 TTTTTACCGGCTGCG GCTCC TCC GGCGC TTTTTCTTCACGCCC TERM 2686 2009377 - 2009355 - G 79 -2.7 -5.18355 | overlap 2009357 GGTAAAAAGTAAAAA TACCAGG TTAGGCATT CCTGGCA CCATGCCAAGCAGCC flhB 2011434 - 2010283 - | flagellar biosynthesis protein FlhB TERM 2687 2010334 - 2010314 - G 74 -6.8 -4.36914 | opp_overlap 2010321 TTCTCGTTCATAAAA TCCAGCGC TTCTG GCACCGGA AGGTTCTCAGGTTGT TERM 2688 2011037 - 2011048 + g 71 -7.2 -4.06055 | AACATGCGCTTAATT CCCG GCAG CGGG TTTAATTTAGAAAAT TERM 2689 2011575 - 2011544 - R 82 -13.1 -3.10493 | overlap 2011562 2011564 GCGTTAATAGAGATA GCCGGATACGATA AGAAAG TCTCGTATCCGGC CGGGTTGACGGATTC cheZ 2012272 - 2011628 - | chemotaxis regulator CheZ cheY 2012672 - 2012283 - | chemotaxis regulatory protein CheY cheB 2013739 - 2012690 - | chemotaxis-specific methylesterase cheR 2014602 - 2013736 - | chemotaxis methyltransferase CheR TERM 2690 2014055 - 2014079 + g 74 -7.1 -4.28774 | opp_overlap 2014055 CCGCGCATGAAGTAA CGTTGTAGCTG CTG CGGCGATAACG TTTTCAGTTCGCTGA TERM 2691 2014537 - 2014551 + g 71 -11.4 -2.88999 | opp_overlap 2014527 2014526, overlap 2014539 AAAATGCGCGTCGGA CAGCGC GAG GCGCTG TGTCATCTGTAACAA cheM 2016417 - 2014756 - | methyl accepting chemotaxis protein II TERM 2692 2015324 - 2015342 + g 95 -5.2 -5.42862 | opp_overlap 2015325, overlap 2015325 GCAATACCGTCGATA ACGCTGAT AAT GTCAGCGA TTTTTTTCGAACTGT TERM 2693 2015325 - 2015341 + g 73 -8.7 -3.84633 | opp_overlap 2015325, overlap 2015324 CAATACCGTCGATAA CGCTGAT AAT GTCAGCG ATTTTTTTCGAACTG TERM 2694 2016618 - 2016650 + r 100 -18.5 -3.61715 | opp_overlap 2016611 2016620, overlap 2016619 AAGCATAACGGTGAA TATTGCCGGATGGCG CGA CGCCATCCGGCAACG TTATTACGCGACGTG TERM 2695 2016619 - 2016649 + r 100 -19.8 -2.76815 | opp_overlap 2016611 2016620, overlap 2016618 AGCATAACGGTGAAT ATTGCCGGATGGCG CGA CGCCATCCGGCAAC GTTATTACGCGACGT TERM 2696 2016648 - 2016620 - R 100 -23.3 -3.07233 | opp_overlap 2016619 2016618, overlap 2016611 GCATAACGGTGAATA TTGCCGGATGGCG CGA CGCCATCCGGCAA CGTTATTACGCGACG cheW 2017157 - 2016654 - | purine-binding chemotaxis protein TERM 2697 2016700 - 2016710 + g 70 -3.2 -4.74706 | AGCGCCATCTCTTCG CTGT TAA GCAG TTTTTCGATATTCAC cheA 2019193 - 2017178 - | chemotaxis protein CheA TERM 2698 2017958 - 2017969 + g 83 -7.2 -4.60924 | GACAACATTTTTCCC CGCC TCAA GGCG TTTTTCCGGCATTTC TERM 2699 2018452 - 2018466 + g 70 -3.4 -4.6821 | opp_overlap 2018437, overlap 2018442 CTGCCGGAGGCGCTA CCGGCG CTA CCTCGG TTTTCTCTTGCGCTT motB 2020127 - 2019198 - | flagellar motor protein MotB TERM 2700 2019625 - 2019637 + g 70 -6.9 -4.11216 | overlap 2019626 ATATACGGCTCAACT TCGGC GCT GCCGG TTTTAAACATCGGGC TERM 2701 2020064 - 2020091 + g 70 -6.9 -4.07687 | gap 1, overlap 2020059 2020066 AGGAACCGTGCGCCC CGCCGCCGTGCG GTTTG TGC-CTGCGGCG TTTTACGACGACAAT TERM 2702 2020066 - 2020076 + g 71 -8.2 -3.91897 | overlap 2020059 2020064 GAACCGTGCGCCCCG CCGC CGT GCGG TTTGTGCCTGCGGCG motA 2021011 - 2020124 - | flagellar motor protein MotA TERM 2703 2021109 - 2021086 - R 100 -15.4 -5.86332 | opp_overlap 2021082 2021081 GCAAGGCAAAAAAAA GCAGCGGTAA TGAC TTACCGCTGC TGGAGTGTTTGTCCA flhC 2021714 - 2021136 - | transcriptional activator FlhC flhD 2022067 - 2021717 - | transcriptional activator FlhD TERM 2704 2022332 - 2022351 + H 73 -8 -4.08945 | opp_overlap 2022332 GGCGATTTTAGAAAA TATGTGAT GCAG ATCACATA TTTTAACGGAATACT TERM 2705 2022351 - 2022332 - H 79 -8 -4.4009 | opp_overlap 2022332 GGCGATTTTAGAAAA TATGTGAT GCAG ATCACATA TTTTAACGGAATACT yecG 2022854 - 2023282 + | universal stress protein UspC otsA 2024721 - 2023300 - | trehalose-6-phosphate synthase TERM 2706 2023401 - 2023388 - GT 72 -3.8 -4.71828 | opp_overlap 2023388 AGGTCATGAATAAAA CGCT CCTGCC AGCG GTTAATGTCATTTTT TERM 2707 2024665 - 2024643 - GT 86 -14.8 -2.71364 | opp_overlap 2024643 2024650, overlap 2024614 2024615 TTAGCGCGCCAAGCA CGCCAACGGC GAG GCCGCCGGCG CCGCCTTTATTATCC TERM 2708 2024650 - 2024670 + gT 81 -8.1 -4.30719 | opp_overlap 2024614 2024615 2024643, overlap 2024643 GCCAAGCACGCCAAC GGCGAGGCC GCC GGCGCCGCC TTTATTATCCGGGGG otsB 2025499 - 2024696 - | trehalose-6-phosphate phosphatase TERM 2709 2024934 - 2024920 - GR 82 -7.1 -4.82901 | CGTCGCCCACAAAAA CGGGA ATCCG TCCCG CAAAGGGCGCCTCCT TERM 2710 2025627 - 2025593 - R 100 -14.4 -3.91897 | gap 1, overlap 2025595 2025596 CTCGCCATTTAGAAA GACCATCGCCAGCCG GGGTAG CGGCTGGCGATGA-C GTGAAGCTATACTGT TERM 2711 2025626 - 2025595 - R 100 -18.1 -3.5511 | overlap 2025593 2025596 CGCCATTTAGAAAGA CCATCGCCAGCCG GGGTAG CGGCTGGCGATGA CGTGAAGCTATACTG TERM 2712 2025625 - 2025596 - R 100 -19.4 -2.72745 | overlap 2025595 2025593 GCCATTTAGAAAGAC CATCGCCAGCCG GGGTAG CGGCTGGCGATG ACGTGAAGCTATACT araH 2026689 - 2026132 - | putative intracellular protease/amidase ftnB 2027240 - 2027743 + | ferritin-like protein TERM 2713 2027888 - 2027910 + T 75 -9.8 -3.50447 | opp_overlap 2027880 CACATCATGCCAGCC GACAGGCGCG AAA CGCCTCTGTC TTGTCTGGGCATTAC STM1933 2028560 - 2027922 - | hypothetical protein TERM 2714 2028670 - 2028646 - H 72 -8.1 -3.76607 | GAACACACATTCAAA TTTAATAAAAC CAG GTTTCATTAAA TGAAAAGACGCTCAC STM1934 2028816 - 2029151 + | putative outer membrane lipoprotein TERM 2715 2029136 - 2029157 + F 73 -10.9 -2.53876 | opp_overlap 2029135 2029133 2029132 CGTCCCGCAAATCAT GCCGCTTTA TTAT TAAGGCGGC TGGCTTAACGTCGAC TERM 2716 2029209 - 2029228 + F 87 -10 -4.35747 | TGCAGGGTCGCTATT GCCAGCAT GAAG GTGCTGGC TTTCCTTTATTTTTA ftn 2029391 - 2029888 + | ferritin yecH 2030173 - 2029934 - | putative cytoplasmic protein TERM 2717 2030068 - 2030083 + g 75 -6 -4.63932 | TGTGAAATCGTGCCC GCTCGC CAAA GCGCGC TTTTATTGCCGCCTC TERM 2718 2031361 - 2031371 + G 71 -8.2 -3.786 | overlap 2031359 TGATTACCTTTCTGC CGCC GCT GGCG TTTGCGCTTTTCTAC TERM 2719 2031520 - 2031539 + G 85 -11.4 -4.03978 | GTGTGGCAGGCGGCA CGCCAGCG CTGG CGCTGGTG TTTATCTGCGGCATT tyrP 2030400 - 2031611 + | tyrosine-specific transport protein TERM 2720 2031659 - 2031623 - T 100 -18.1 -3.66874 | TTAACGCCAGGCAAA GATTACCGGGCCCGGAC GCC GTCCAGGCTCGATAATC ATCACGCTATGGCCG yecA 2032351 - 2031686 - | hypothetical protein TERM 2721 2032568 - 2032549 - R 75 -6.4 -4.52589 | opp_overlap 2032549 2032547 2032545 TCGCCCCACACAAAA GCGAGAGA TGGG TTTCTCGC TATATTATACTCATG STM1939 2032915 - 2032589 - | putative glucose-6-phosphate dehydrogenase STM1940 2034567 - 2033128 - | putative cell wall-associated hydrolase TERM 2722 2034224 - 2034238 + g 100 -3.5 -5.75945 | gap 1, opp_overlap 2034215 TTAATACTGGCATCC CGC-GC CTGT GCTGCG TTTTTTTTCAGCAAT TERM 2723 2034279 - 2034269 - G 76 -3.2 -5.0916 | GCGGTAATATAAAAA CCAT TCC ACGG CGAGTGCGCTTCACT STM1941 2035112 - 2034780 - | putative inner membrane protein TERM 2724 2035317 - 2035304 - R 100 -8.1 -5.66684 | opp_overlap 2035304 GAAGGCACAAAAAAA CCACC CGTA GGTGG TTTCACGACACTGCT TERM 2725 2035403 - 2035423 + r 72 -10.5 -2.89742 | overlap 2035406 GCACAGCGCGAACGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 2726 2035531 - 2035546 + r 73 -7.6 -4.07885 | CCGCTTTGTTAACGC GCCAAA TTTT TTTGGC TTTTCAGCCAGCATC TERM 2727 2035619 - 2035635 + r 73 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA pgsA 2036361 - 2035813 - | phosphatidylglycerophosphate synthetase TERM 2728 2036261 - 2036250 - G 71 -4.4 -4.67943 | overlap 2036251 2036253 CGGCAATACAGAAAA TCAG CGCG CTGA CCATCGGCGCCCAGG uvrC 2038250 - 2036418 - | excinuclease ABC subunit C TERM 2729 2036831 - 2036843 + g 70 -6.9 -4.09864 | AAACGGCTTTCGCCT GGGCG AGC TGCCC TTTTCCGCCGTCGAT TERM 2730 2037202 - 2037212 + g 71 -4.6 -4.53303 | opp_overlap 2037193, overlap 2037196 2037195 AGATAACGGGCGCGA TCGC CGC GCGG TTTTGTCTGGACATG TERM 2731 2037382 - 2037395 + g 70 -6.7 -4.09864 | ACTTCGCCCAGTTCC GTACC ACCA GGTAC TTTTGGAAAATAGCT uvrY 2038903 - 2038247 - | response regulator yecF 2039367 - 2039591 + | hypothetical protein TERM 2732 2039599 - 2039625 + T 88 -12.2 -3.63627 | opp_overlap 2039577 2039599 GCCAGTAGTAAAAAA CCGGCTGTTAGC ATC GCTTTCAGCCGG TTTCGCGTCTGGCGC TERM 2733 2039625 - 2039599 - T 100 -12.2 -5.1861 | opp_overlap 2039599, overlap 2039577 GCCAGTAGTAAAAAA CCGGCTGTTAGC ATC GCTTTCAGCCGG TTTCGCGTCTGGCGC sdiA 2040380 - 2039658 - | DNA-binding transcriptional activator SdiA yecC 2041364 - 2040612 - | putative amino-acid ABC transporter ATP-binding protein YecC yecS 2042029 - 2041361 - | putative ABC-type amino acid transporter permease component yedO 2043036 - 2042050 - | D-cysteine desulfhydrase TERM 2734 2043120 - 2043103 - R 89 -5.5 -5.67283 | gap 1, opp_overlap 2043103 AACGGAAATAAAAAA GGCGC-CG ATT CACGCGCC TCCGTTTGCTGACAT fliY 2043990 - 2043190 - | cystine transporter subunit fliZ 2044688 - 2044137 - | protein FliZ fliA 2045466 - 2044747 - | flagellar biosynthesis sigma factor TERM 2735 2045656 - 2045632 - R 90 -9.9 -4.42974 | opp_overlap 2045635, overlap 2045634 2045635 GCCAGATAGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAGATGCGCCTAT TERM 2736 2045654 - 2045634 - R 93 -12.5 -3.8147 | opp_overlap 2045635, overlap 2045632 2045635 CAGATAGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAGATGCGCCT TERM 2737 2045653 - 2045635 - R 93 -16 -2.87798 | opp_overlap 2045635, overlap 2045634 2045632 AGATAGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC TERM 2738 2045635 - 2045653 + r 100 -16 -4.62069 | opp_overlap 2045635 2045634 2045632 AGATAGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC tnpA_2 2046244 - 2045735 - | transposase for IS200 TERM 2739 2046306 - 2046324 + r 100 -16 -4.18197 | opp_overlap 2046296 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAT TERM 2740 2046366 - 2046343 - R 93 -10.2 -4.42974 | TCCATAGACAATAAA CGGGATGCGC AAAA GCCCACCCCG AACAAAACTATGTCA fliB 2047579 - 2046374 - | lysine-N-methylase TERM 2741 2046618 - 2046639 + g 73 -5.9 -4.386 | overlap 2046618 TCGACATTCGGCTGG TTGGGGAAA TTAT TTTCCCAAA TTTTATAGAGAATTA TERM 2742 2047619 - 2047604 - R 100 -10.4 -5.26875 | opp_overlap 2047604 TCCGGAATTAAAAAA GGCAGC TTTC GCTGCC TTGATTGTGTACCAC TERM 2743 2047604 - 2047619 + r 79 -10.4 -3.49618 | opp_overlap 2047604 TCCGGAATTAAAAAA GGCAGC TTTC GCTGCC TTGATTGTGTACCAC fliC 2049145 - 2047658 - | flagellin TERM 2744 2048723 - 2048737 + g 71 -10 -3.55622 | GATGGTCAGGGTGTT GTCCTG CGC CAGGAC TTTCACGCCGTTGAA TERM 2745 2049276 - 2049291 + H 71 -7.5 -3.95555 | CGATCTTTTTCTTAG GCGGC GAAATA GCCGC TTTATGCATCATTAT fliD 2049402 - 2050805 + | flagellar capping protein fliS 2050820 - 2051227 + | flagellar protein FliS fliT 2051227 - 2051595 + | flagellar biosynthesis protein FliT TERM 2746 2051668 - 2051619 - f 100 -16.6 -4.25104 | opp_overlap 2051637, overlap 2051620 CGTCTCGTATGAAAA TTCTTCCATACTCCAGAGGTCG GCTAAA CGACTTCTGGAGCACGGAAGAT GAAAAACCCCACGTT TERM 2747 2051667 - 2051620 - f 100 -20.1 -3.14848 | opp_overlap 2051637, overlap 2051619 GTCTCGTATGAAAAT TCTTCCATACTCCAGAGGTCG GCTAAA CGACTTCTGGAGCACGGAAGA TGAAAAACCCCACGT TERM 2748 2052018 - 2052003 - g 74 -4.7 -4.8048 | GGCGCAGACGAAAAA GAACG TATTCG CGTTC AGCGCGTGAATCAGG amyA 2051667 - 2053151 + | cytoplasmic alpha-amylase TERM 2749 2053215 - 2053228 + T 82 -5.9 -5.24129 | overlap 2053194 2053208 CGGCGTCGGCAGCGG CGTCG GCAG CGGCG TTTTTTCTAACGCGG yedD 2053616 - 2053191 - | hypothetical protein TERM 2750 2053520 - 2053534 + g 70 -7 -4.08945 | AGTACCCTTCCAGAC CGGCCG GCG CGGGCG TTTTCACCACATCAT TERM 2751 2053934 - 2053955 + G 80 -8.7 -4.20883 | opp_overlap 2053938 GCCGTGACGGGCGAA TTTACCCGC TGGG GCGGGCAAA TTTTGCAGCTTTTTG TERM 2752 2054185 - 2054209 + G 77 -4.1 -5.0133 | CTTCGGCGCGCGTCT GGCGATGGGGT GTA ACCTGGCCGCC TTTTTTACCGGGATC yedE 2053742 - 2055007 + | putative inner membrane protein yedF 2055004 - 2055237 + | hypothetical protein TERM 2753 2055243 - 2055271 + T 70 -9.5 -3.05597 | opp_overlap 2055240, overlap 2055242 TCAAAAATAAGCGCA TACTCCCGCTGTA CGT TACGGCGGGAGAC CTTTTACGGCATAAC TERM 2754 2055492 - 2055505 + T 70 -5.3 -4.55295 | overlap 2055490 TTTTACTCACTGACA TCATC AGGT GATGA TTTATTTATGCACAG fliE 2056322 - 2056008 - | flagellar hook-basal body protein FliE TERM 2755 2057599 - 2057569 - g 76 -9 -3.93004 | AGAATACGCCACAAA CCAGCACCAGTACC AAC AGTAACAGTGCTGG CCCGCGTAGTACACA TERM 2756 2057785 - 2057800 + G 72 -2.5 -4.91109 | AGATCGAGGATTTAA CCCGT GAAGCG ATGGG TTTTTCTGATAAACG fliF 2056539 - 2058221 + | flagellar MS-ring protein TERM 2757 2058309 - 2058273 - g 84 -13.8 -3.03441 | gap 1 GACCATTGGCGAAGA CCGGGCGGCAGAGGTGT TTAA ACACCTCT-CCACCCGC GAAGTACAGGCGTTA fliG 2058214 - 2059209 + | flagellar motor switch protein G TERM 2758 2059825 - 2059876 + G 74 -10.3 -3.50393 | gap 3, opp_overlap 2059824, overlap 2059824 CGGCGGGTGTAAAGT CTCT-GCCGATGAG-GGCGAT-CTGG ACG CCAGCGTCGCCACTCGCTGGCAAGAG TTGTGTCGCCTGGCG fliH 2059202 - 2059909 + | flagellar assembly protein H fliI 2059909 - 2061279 + | flagellum-specific ATP synthase fliJ 2061301 - 2061744 + | flagellar biosynthesis chaperone TERM 2759 2062371 - 2062330 - g 70 -5 -4.49644 | gap 2, overlap 2062331 ATGAAAAAGGGAAAA CCGAGGCGTCGCTTGCGCGC GCCA GCG-ACGATCG-CGCCACGG GGCCAGCACTGACGC fliK 2061741 - 2062958 + | flagellar hook-length control protein TERM 2760 2063100 - 2063089 - g 84 -5.8 -5.1356 | opp_overlap 2063088 CGCGATTAACAAAAA GAGC AAAC GCTC GATTTGGATACCTTT TERM 2761 2063205 - 2063230 + G 80 -4.5 -5.05782 | opp_overlap 2063201, overlap 2063207 CGAACGCTAAAGCGG AACCGGCTCCG CCGC CCGCGCCGGTA TTTTTTGCGCTGGAT TERM 2762 2063207 - 2063228 + G 70 -7.1 -4.15748 | opp_overlap 2063201, overlap 2063205 AACGCTAAAGCGGAA CCGGCTCCG CCGC CCGCGCCGG TATTTTTTGCGCTGG fliL 2063063 - 2063530 + | flagellar basal body-associated protein FliL TERM 2763 2063930 - 2063941 + G 74 -7.2 -4.07687 | overlap 2063928 CGATAACCTGTTCGG CGGC GACG GCCG TTTTCCGACCAAAGT fliM 2063535 - 2064539 + | flagellar motor switch protein FliM TERM 2764 2064669 - 2064633 - g 77 -7.2 -4.32034 | gap 1, opp_overlap 2064636, overlap 2064634 CGACCACCACTAAAA GCGCCGCCGACGCGGTT TTCC AACAGCTT-GGCGGCGG CGATGTCAGCGGTGC TERM 2765 2064668 - 2064634 - g 71 -10.7 -3.18738 | gap 1, opp_overlap 2064636, overlap 2064633 GACCACCACTAAAAG CGCCGCCGACGCGGTT TTCC AACAGCTT-GGCGGCG GCGATGTCAGCGGTG TERM 2766 2064636 - 2064647 + G 74 -7.2 -4.08692 | opp_overlap 2064634 2064633 CCACCACTAAAAGCG CCGC CGAC GCGG TTTTCCAACAGCTTG fliN 2064536 - 2064949 + | flagellar motor switch protein FliN TERM 2767 2064997 - 2065023 + G 70 -9.5 -3.38727 | gap 1, overlap 2064997 2065019 ACCGCGCCAGCCGGA T-CGCCGCTCAT GCAG GTGAGCGGCGCA TTAATTGGCATTATT fliO 2064949 - 2065326 + | flagellar biosynthesis protein FliO TERM 2768 2065451 - 2065461 + G 74 -6.8 -4.26903 | opp_overlap 2065436 CTGGTCATTATCCGT CCAG ACG CTGG TTTTCATCACCTCGC TERM 2769 2065745 - 2065701 - g 95 -14.3 -3.18383 | opp_overlap 2065713 2065714 2065740 2065742, overlap 2065713 ATTTCTATGCAGGAA GCGCTGGATAAAGGCGCGCAA CCG TTACGCGCGTTCATGCTGCGC CAAACCCGCGAAGCC fliP 2065326 - 2066063 + | flagellar biosynthesis protein FliP fliQ 2066073 - 2066342 + | flagellar biosynthesis protein FliQ fliR 2066351 - 2067145 + | flagellar biosynthesis protein FliR rcsA 2067427 - 2068050 + | colanic acid capsular biosynthesis activation protein A dsrB 2068283 - 2068089 - | hypothetical protein TERM 2770 2068230 - 2068252 + g 100 -16.2 -4.14392 | TGCCAGTACCACGCC CGGTCGGCGG GGA CCGCCGTCCG TTTTAACGGTTACCC yodD 2068412 - 2068639 + | putative cytoplasmic protein TERM 2771 2068676 - 2068656 - f 100 -12.5 -5.41746 | overlap 2068644 2068643 AATGGCCGAAAAAAA TCCCGGCCC TAC GGGTCGGGA TCAAACTTGCTTATG yedP 2068949 - 2069764 + | mannosyl-3-phosphoglycerate phosphatase STM1987 2071455 - 2069743 - | putative inner membrane protein TERM 2772 2071595 - 2071614 + r 100 -12.1 -4.4648 | opp_overlap 2071595 TTCTCCACAGCAAAA CGCCCGG CATTAA CCGGGCG TTTTGTCATCGGGCT TERM 2773 2071614 - 2071595 - R 95 -12.8 -4.34402 | opp_overlap 2071595 TTCTCCACAGCAAAA CGCCCGGC ATTA ACCGGGCG TTTTGTCATCGGGCT STM1988.S 2071838 - 2071620 - | putative cytoplasmic protein yedI 2072793 - 2071882 - | hypothetical protein TERM 2774 2072654 - 2072625 - G 78 -13.6 -2.62616 | gap 1 CCACGCTCCATACCA CCGGCAGCTCGCG ATTAG CGCGAAC-GCCGG TCACCTGCTGCGCAT TERM 2775 2072862 - 2072877 + H 72 -3.2 -5.06414 | opp_overlap 2072842 2072857 AATGCCGAAACCGGC GGCG CGGGTCAA CGCC TTTTTATTCCAAAAG yedA 2072969 - 2073889 + | hypothetical protein vsr 2074348 - 2073878 - | DNA mismatch endonuclease TERM 2776 2073905 - 2073941 + g 76 -12.4 -3.02144 | gap 2, opp_overlap 2073896 2073895 ATGAATCCCCTGGGT GTCGATCTGCGCGCTGGC GCC GCC-GC-CGCAGATCCAC TCTTCCAGGCGCTCC dcm 2075759 - 2074329 - | DNA cytosine methylase TERM 2777 2074724 - 2074734 + g 71 -4.6 -4.62069 | overlap 2074721 CAAAACCGTTTCCCC GCGC CTG GTGC TTTTTCGCGTAGCGA TERM 2778 2075159 - 2075181 + g 76 -3.2 -5.06414 | opp_overlap 2075160, overlap 2075160 2075162 GAGTCTCGCAGGCAA AGCCGTGGGC GCG GCCCAGCGCA TTTTTCTTGGAAACG yedJ 2076528 - 2075833 - | hypothetical protein STM1994 2076919 - 2076620 - | putative inner membrane protein TERM 2779 2077246 - 2077261 + H 100 -10.4 -6.18768 | opp_overlap 2077246 TCATTACCCACATTA CCGGCA TTTA TGCCGG TTTTTTTTATGTTTT TERM 2780 2077261 - 2077246 - H 71 -10.4 -2.65264 | opp_overlap 2077246 TCATTACCCACATTA CCGGCA TTTA TGCCGG TTTTTTTTATGTTTT ompS 2077569 - 2078765 + | putative porin TERM 2781 2078782 - 2078806 + T 100 -17.9 -3.80733 | opp_overlap 2078785, overlap 2078785 ACGCTTTATGTTATT CAAGCCCGTGC TTA GCGCGGGCTTG TTATTATAGGGTAAG TERM 2782 2078803 - 2078785 - T 78 -11.6 -3.06796 | opp_overlap 2078782 2078785 CTTTATGTTATTCAA GCCCGTGC TTA GCGCGGGC TTGTTATTATAGGGT TERM 2783 2078785 - 2078803 + T 100 -13.8 -4.03219 | opp_overlap 2078785, overlap 2078782 CTTTATGTTATTCAA GCCCGTGC TTA GCGCGGGC TTGTTATTATAGGGT TERM 2784 2079016 - 2079002 - T 87 -7.1 -5.24129 | opp_overlap 2079002 TCCGGGCATAAAAAA GCTCC TGTAC GGAGC TAATATGAATTATTT TERM 2785 2079139 - 2079164 + T 71 -9.9 -3.21924 | gap 1, opp_overlap 2079145, overlap 2079145 CAAACGGGTTTTGCT CAGTAACATCGA ATG TCGATGTT-CTG TATTGTGAACCATGG TERM 2786 2079145 - 2079159 + T 72 -8.6 -3.72788 | opp_overlap 2079145, overlap 2079139 GGTTTTGCTCAGTAA CATCGA ATG TCGATG TTCTGTATTGTGAAC cspB 2079437 - 2079225 - | putative cold-shock protein umuC 2081160 - 2079892 - | DNA polymerase V subunit UmuC umuD 2081582 - 2081163 - | DNA polymerase V subunit UmuD STM1999 2081870 - 2081709 - | putative cytoplasmic protein yeeI 2082351 - 2083148 + | putative inner membrane protein TERM 2787 2083332 - 2083361 + F 83 -13.7 -2.73529 | opp_overlap 2083336, overlap 2083328 2083336 AGGAGCCAAATTTAG GGAAGCAGACGTT CACT GACGTCTGCTTTC TGCATTTATATCAAC TERM 2788 2083357 - 2083336 - f 73 -10.2 -3.11732 | opp_overlap 2083336 2083332 2083328 GCCAAATTTAGGGAA GCAGACGT TCACTG ACGTCTGC TTTCTGCATTTATAT TERM 2789 2083336 - 2083357 + F 89 -10.9 -4.04922 | opp_overlap 2083336, overlap 2083332 2083328 GCCAAATTTAGGGAA GCAGACGTT CACT GACGTCTGC TTTCTGCATTTATAT TERM 2790 2084120 - 2084132 + F 73 -4.1 -4.82901 | ATTAGATCAAAACTT CAACG CTT TGTTG TTTTTGTCAGCAAAC TERM 2791 2084358 - 2084385 + F 89 -6.2 -5.44119 | AAGAAATTATCTTTA CCCGGTTGATCT GATA AGGTTTGCCGGG TTTTTTTGACATCCA TERM 2792 2084578 - 2084567 - g 83 -7.2 -4.58585 | overlap 2084568 CACCGAAAGAAGAAA CGCC GCCC GGCG CGCCGGAGAAATACG STM2005 2084458 - 2084931 + | putative endoprotease TERM 2793 2085118 - 2085073 - f 78 -12 -3.05384 | gap 1, opp_overlap 2085059, overlap 2085099 GCGCCCGGCACTCAA CCGGTGCGTCACTTTCGTCGC GCAAA GCGAC-AAAGTGACGCACAAC CACTACACCGCGCCA TERM 2794 2087199 - 2087186 - g 74 -2.3 -5.00027 | ATGAAAAAGACAAAA TAGCG GAAA CGCTG ACGTTTAAAGATGGT TERM 2795 2087623 - 2087613 - g 74 -6.8 -4.2558 | GAGCTGGTATGAAAA TGGG CAT CCCA AAGAAGAATCCTCTT TERM 2796 2087892 - 2087874 - g 74 -2.3 -5.00846 | TAAAGACGATAAAAA GCAGGGA GCCGA TCGCCGC TGGAGCGAACGTACC STM2007 2086921 - 2088615 + | TPR repeat-containing protein STM2008 2088672 - 2090402 + | putative periplasmic protein TERM 2797 2090458 - 2090407 - T 80 -13.1 -2.52896 | gap 2 CCACGCCTTAATCGA TTTACCCGCCCGGCCACCTTTCTCA CATG CGGG-AAGGCGGC-GGGCGGGAAAA ATCAATCGCGGAAGT TERM 2798 2091234 - 2091191 - T 71 -9.6 -3.29461 | opp_overlap 2091195, overlap 2091194 2091195 GAAGCCGCGGCACAA TAAGGCCTTAACGGGATACA GAAC CGCCTCCCGCTAAGGCTTCA TTCAGCCACTTTCCA TERM 2799 2091231 - 2091194 - T 76 -9.1 -3.78934 | opp_overlap 2091195, overlap 2091191 2091195 GCCGCGGCACAATAA GGCCTTAACGGGATACA GAAC CGCCTCCCGCTAAGGCT TCATTCAGCCACTTT TERM 2800 2091230 - 2091195 - T 79 -12.6 -2.87146 | opp_overlap 2091195, overlap 2091194 2091191 CCGCGGCACAATAAG GCCTTAACGGGATACA GAAC CGCCTCCCGCTAAGGC TTCATTCAGCCACTT amn 2092761 - 2091307 - | AMP nucleosidase TERM 2801 2091515 - 2091492 - G 83 -8 -4.40003 | overlap 2091493 2091495 TGTCAGAAACACAAA GCAGCGTGCC GTAA GGCACGCGGA AGCGATAGCCCTGGG TERM 2802 2091514 - 2091493 - G 74 -11.5 -3.23279 | overlap 2091492 2091495 GTCAGAAACACAAAG CAGCGTGCC GTAA GGCACGCGG AAGCGATAGCCCTGG TERM 2803 2091512 - 2091495 - G 83 -12.7 -3.16835 | overlap 2091493 2091492 CAGAAACACAAAGCA GCGTGCC GTAA GGCACGC GGAAGCGATAGCCCT STM2011 2093283 - 2092957 - | putative cytoplasmic protein TERM 2804 2094097 - 2094070 - g 100 -9.8 -5.05782 | ATGGATGTCAAAAAA CCCGGTAAACCC TCTC AGGTCAACCGGG TAAAGATAATTTATT STM2011.1n 2093989 - 2094156 + | hypothetical protein yeeO 2095834 - 2094377 - | hypothetical protein TERM 2805 2094456 - 2094440 - G 77 -7.9 -4.27617 | overlap 2094442 CAGACGCCAGTAAAA CAGTGCG CCA CGCACGG CCCAGTCAAGAAACA TERM 2806 2094454 - 2094442 - G 70 -9.1 -3.73756 | overlap 2094440 GACGCCAGTAAAACA GTGCG CCA CGCAC GGCCCAGTCAAGAAA TERM 2807 2096134 - 2096161 + r 100 -15.6 -4.18488 | AAGAACTTATCTTTA CCCGGTTGACCT GATA AGGTCTACCGGG TTTCTTGACATCCAT erfK 2097225 - 2096296 - | hypothetical protein cobT 2098373 - 2097303 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobS 2099143 - 2098400 - | cobalamin synthase TERM 2808 2098725 - 2098684 - G 100 -10.7 -4.75472 | gap 1 GGTACATCAATAAAA CGGCGCTG-CCGCGTCCGGC CGC ACAGGCCGCCGCCAACGCCG CCAACATTGGCGTTC cobU 2099685 - 2099140 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase cbiP 2101202 - 2099682 - | cobyric acid synthase TERM 2809 2100718 - 2100680 - G 76 -9.7 -3.86346 | gap 2, overlap 2100682 CCAGCGTGCCATAAA TAGCGGCGAATA-CG-CCG CCC CGGTCGATATCCGCCACCA GAATAACCGGACACT TERM 2810 2100697 - 2100682 - G 81 -11.8 -3.52113 | overlap 2100680 AGCGTGCCATAAATA GCGGCG AATA CGCCGC CCCGGTCGATATCCG TERM 2811 2101146 - 2101127 - G 79 -2.7 -5.252 | overlap 2101128 2101138 2101139 CATCCTGATAAAAAA TGCGGCA TAAACC CGCCGCC AGCACACTTTTGCCG cbiO 2102014 - 2101199 - | cobalt transporter ATP-binding subunit cbiQ 2102700 - 2102023 - | vitamin B12 biosynthetic protein TERM 2812 2102177 - 2102165 - G 71 -4.8 -4.56133 | overlap 2102160 CTGCAATAACCAAAA CGCA GCGTT TGCG CACGACGGATTGCCA TERM 2813 2102655 - 2102638 - G 76 -5.5 -4.81551 | opp_overlap 2102641 2102641, overlap 2102639 CAGCCACAGCAAAAA CTTGCGC TGCG GCGCAAC GTGTGCCCAGCGGCT cbiN 2102968 - 2102687 - | cobalt transport protein CbiN cbiM 2103617 - 2102970 - | cobalt transport protein CbiM TERM 2814 2103215 - 2103197 - G 72 -2.2 -4.96848 | overlap 2103199 TCGCGCACAGAAAAA CGGCGACA TCA CGGCGCAG TCCGGCACGGCAGGC TERM 2815 2103483 - 2103468 - G 74 -2.4 -4.98911 | overlap 2103469 CAGGACAAAAATAAA CGCGCC GCAC AGCGCC AGCAGTACCTTCTGA cbiL 2104417 - 2103704 - | cobalt-precorrin-2 C(20)-methyltransferase TERM 2816 2103981 - 2104002 + g 77 -8 -4.07568 | opp_overlap 2103970 ATAACCGCCAGCGAT TGCCGTTC TATGGC GAGCGGCA TTTTCGCGCGGGCGG TERM 2817 2104105 - 2104093 - G 91 -4.1 -5.52384 | GCTGGAGTAAAAAAA TCCAG GTA CTGAA TAGCATCGCATCGCC TERM 2818 2104359 - 2104345 - G 79 -11.4 -3.68569 | opp_overlap 2104343 CCAGCGAGCCAAGAA TCCGCG CTG CGCGGA CGGTTATCAGGTCGG cbiK 2105208 - 2104414 - | vitamin B12 biosynthetic protein TERM 2819 2104473 - 2104486 + g 86 -9.5 -4.36914 | opp_overlap 2104458 2104471 GCGCGACAAACATCG CCCGG ATAG CCGGG TTTTCTCCCAGCCCG cbiJ 2106002 - 2105211 - | cobalt-precorrin-6x reductase cbiH 2106724 - 2105999 - | precorrin-3B C17-methyltransferase cbiG 2107779 - 2106724 - | cobalamin biosynthesis protein CbiG TERM 2820 2106931 - 2106957 + g 76 -2.9 -5.03314 | CACGCGGCAGCAGGA GGCGAGCTG AATAAGCCC CGGCTCCCC TTTTTTGAGCGTGAC cbiF 2108533 - 2107760 - | vitamin B12 biosynthetic protein cbiT 2109095 - 2108517 - | cobalt-precorrin-6Y C(15)-methyltransferase cbiE 2109690 - 2109085 - | cobalt-precorrin-6Y C(5)-methyltransferase TERM 2821 2109472 - 2109460 - G 75 -6.9 -4.40358 | ACCGATGCCATAAAA CAGCG GAT CGCCG GAGGCCAGCACCACG cbiD 2110823 - 2109684 - | cobalt-precorrin-6A synthase TERM 2822 2109764 - 2109781 + g 71 -6.2 -4.25104 | opp_overlap 2109775 AAGAAAACAGGATGG CGTCGC AGACAG GCGGCG TTTTGGTAAAACGCA cbiC 2111455 - 2110823 - | precorrin-8X methylmutase cobD 2112425 - 2111466 - | cobalamin biosynthesis protein cbiA 2113801 - 2112422 - | cobyrinic acid a,c-diamide synthase TERM 2823 2113693 - 2113705 + g 95 -10.5 -4.56775 | opp_overlap 2113685 CTTTAAACGGCTGTA CGCGC AGC GCGCG TTTTTGCAGCAGCCT pocR 2115310 - 2114399 - | transcriptional regulator TERM 2824 2114701 - 2114722 + g 89 -2.9 -5.48054 | opp_overlap 2114701 2114712 GATCGTCGGACAAAT GCGCATC AATATAGC GAAGCGC TTTTTTCATTTTACT TERM 2825 2115414 - 2115446 + r 80 -13 -2.56596 | gap 1, opp_overlap 2115414 2115420, overlap 2115419 2115420 AGTACAATGACAATA TCAAAA-GTCTCCCA TTGC TGGGAGACGTTTTGA TCAGTTCGTGAAAGC TERM 2826 2115446 - 2115414 - R 86 -13 -3.36046 | gap 1, opp_overlap 2115414 2115419 2115420, overlap 2115420 AGTACAATGACAATA TCAAAA-GTCTCCCA TTGC TGGGAGACGTTTTGA TCAGTTCGTGAAAGC TERM 2827 2115419 - 2115440 + r 79 -8.7 -4.31379 | opp_overlap 2115414 2115420, overlap 2115414 2115420 AATGACAATATCAAA AGTCTCCCA TTGC TGGGAGACG TTTTGATCAGTTCGT TERM 2828 2115420 - 2115439 + r 81 -12.2 -3.18105 | opp_overlap 2115414 2115420, overlap 2115419 2115414 ATGACAATATCAAAA GTCTCCCA TTGC TGGGAGAC GTTTTGATCAGTTCG TERM 2829 2115439 - 2115420 - R 100 -12.2 -4.47259 | opp_overlap 2115420 2115419 2115414, overlap 2115414 ATGACAATATCAAAA GTCTCCCA TTGC TGGGAGAC GTTTTGATCAGTTCG pduF 2116321 - 2115527 - | propanediol diffusion facilitator pduA 2116846 - 2117130 + | polyhedral body protein pudB 2117238 - 2117939 + | polyhedral body protein TERM 2830 2118106 - 2118085 - g 72 -2.3 -4.84017 | gap 1, overlap 2118087 AACCGTCGATAAAAA TCG-TTAACG GCG CGGTAACCGA GCTGGACGGAAAACC pduC 2117958 - 2119622 + | propanediol dehydratase large subunit TERM 2831 2120296 - 2120280 - g 83 -7.9 -4.59773 | opp_overlap 2120292, overlap 2120282 2120291 CGTGACGGGCAAAAA CCCGCAG GAA CTGCGCG TGGCGCTTTGATAAA pduD 2119633 - 2120307 + | propanediol dehydratase medium subunit TERM 2832 2120292 - 2120302 + F 72 -8.2 -3.73224 | opp_overlap 2120282 2120280 2120291 AAACCCGCAGGAACT GCGC GTG GCGC TTTGATAAAGGATAA TERM 2833 2120434 - 2120377 - g 72 -11.2 -3.14051 | gap 3, overlap 2120375 TGAGCCGCATGAACA GC-CTGCAGGGCGATGC-GCCAGCAGCGG CTC CTGCGGCAGGCGGCA-CGTCCCGCAGCGC AAAGGTCAGCGACTA TERM 2834 2120480 - 2120466 - g 70 -7.1 -4.15044 | CCGCTGGCGAACAAA CACCC GGAAT GGGTG AAAACCGCCACCAAT pduE 2120322 - 2120843 + | propanediol dehydratase small subunit TERM 2835 2121554 - 2121542 - g 100 -7.7 -5.39721 | CGATGAGACAAAAAA CATCG TCC CGATG GCGCGCGCGCTGATT TERM 2836 2121609 - 2121598 - g 74 -7.2 -4.07568 | CCGTGGTGGTTAAAA CGCC ATCC GGCG ACGTCAAAGCGCGCG TERM 2837 2122185 - 2122141 - g 70 -8.7 -3.71917 | gap 1, opp_overlap 2122141, overlap 2122134 ACCCTAAAGGCGAAA TCATCGCCACCCATCTCGCC GGGGCA GGCGACATG-GTCACGATGA TTATTGCCCGCGAAC pduG 2120853 - 2122685 + | propanediol dehydratase reactivation protein pduH 2122675 - 2123025 + | propanediol dehydratase reactivation protein pduJ 2123044 - 2123319 + | polyhedral body protein pduK 2123323 - 2123805 + | polyhedral body protein TERM 2838 2123971 - 2123958 - g 79 -3.1 -5.28778 | gap 1, overlap 2123959 2123960 ATCAGCGAGAAAAAA GCGCTG CTG CAGC-C GGGACAATACGCCGC pduL 2123805 - 2124437 + | propanediol utilization protein pduM 2124434 - 2124925 + | propanediol utilization protein pduN 2124929 - 2125204 + | polyhedral body protein pduO 2125214 - 2126224 + | propanediol utilization protein pduP 2126221 - 2127615 + | CoA-dependent propionaldehyde dehydrogenase TERM 2839 2128479 - 2128498 + G 71 -4.8 -4.56597 | overlap 2128477 2128481 GCCAAACGCTACGCG CGGCTGGC CAAA GCCTGCGG TTTTTGCCCGGCAGA pduQ 2127627 - 2128739 + | propanol dehydrogenase pduS 2128736 - 2130091 + | polyhedral body protein pduT 2130094 - 2130648 + | polyhedral body protein pduU 2130648 - 2130998 + | polyhedral body protein TERM 2840 2131070 - 2131046 - g 73 -5.5 -4.58395 | opp_overlap 2131065 2131067 GCCAGTGCGGAAAAA CCTCGCTGACC CAA AGCCTGCGCGG CGAAGCGCTCCATTA pduV 2131003 - 2131455 + | propanediol utilization protein TERM 2841 2131714 - 2131727 + G 74 -2.3 -5.02074 | overlap 2131703 2131704 TGGGCCATCGTGTGG CGCAC GGCG GTGAG TTTTTTAAAGACTCG TERM 2842 2132036 - 2132018 - g 70 -6.6 -4.07568 | CGTTCTGGCGGAAAA GCTGGGCG TAC CACTCAGC GCATTACGGGTGATT pduW 2131440 - 2132654 + | propionate kinase pduX 2132712 - 2133614 + | propanediol utilization protein TERM 2843 2133640 - 2133606 - T 79 -10.7 -3.53091 | ACTGGCGGGGTCAAA CTGCAGTGAGAGCCT GATAT ACGCTCCCACTGCCG TAGCGCATTATTCGG yeeX 2133983 - 2133648 - | hypothetical protein yeeA 2135286 - 2134228 - | putative inner membrane protein TERM 2844 2134916 - 2134938 + g 76 -2.8 -5.08824 | gap 1, opp_overlap 2134903, overlap 2134916 ACGGCAAGCGTTATG CC-TATCAG TAGCGC CTGATACGG TTTTTTCCCTAAGGC TERM 2845 2135353 - 2135381 + r 76 -8.2 -4.07568 | gap 1, overlap 2135354 CAAAAATAGCGCACT G-GCGGACGGA ACACATTA TCCGTCCGCTC TTTTCAGCCAGGAAA TERM 2846 2135354 - 2135379 + r 86 -11.9 -3.63744 | overlap 2135353 AAAAATAGCGCACTG GCGGACGGA ACACATTA TCCGTCCGC TCTTTTCAGCCAGGA sbmC 2135872 - 2135405 - | DNA gyrase inhibitor TERM 2847 2135548 - 2135537 - G 90 -5.8 -5.23316 | GAGGACATCAAAAAA CCGT TCCC ACGG CTTCGCAAAGTCACG dacD 2137197 - 2136025 - | D-alanyl-D-alanine carboxypeptidase TERM 2848 2137134 - 2137115 - G 86 -10 -4.25104 | GGTTGGGGAGCAAAA CTTACGGC ATCG GCCGCAAG CGCAGGAGAAAGGTG TERM 2849 2137300 - 2137263 - R 74 -8.5 -4.0056 | opp_overlap 2137269 2137274, overlap 2137264 2137274 ACAAACATGGATAAA TTGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCTG ACATTATTTTATGGA TERM 2850 2137299 - 2137264 - R 78 -12 -2.99251 | opp_overlap 2137269 2137274, overlap 2137263 2137274 CAAACATGGATAAAT TGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCT GACATTATTTTATGG phsC 2138085 - 2137321 - | thiosulfate reductase cytochrome B subunit phsB 2138660 - 2138082 - | thiosulfate reductase electron transport protein phsA 2140951 - 2138675 - | thiosulfate reductase precursor TERM 2851 2140894 - 2140884 - G 77 -8.2 -4.07568 | GCCCCGGGCGGAAAA GCGC CCA GCGC GCAGGCAGAGCAGCC TERM 2852 2141781 - 2141766 - g 81 -2.6 -5.31275 | overlap 2141774 CGTTACCACAAAAAA TAAAAG ACTT CTTTCA GCCGAAAGATAAAAA TERM 2853 2141903 - 2141889 - g 83 -7.2 -4.59511 | AAGATGTCTCAAAAA TGAATG CAG CATTCA TGCGTAAGCATATTG sopA 2141570 - 2143918 + | secreted effector protein TERM 2854 2143964 - 2143945 - f 85 -12.2 -3.37344 | opp_overlap 2143945 CCCGCATGGAATTAA GGGACACA GCGT TGTGTCCC TCTGTACATAGACCC TERM 2855 2143945 - 2143964 + F 79 -12.2 -2.91264 | opp_overlap 2143945 CCCGCATGGAATTAA GGGACACA GCGT TGTGTCCC TCTGTACATAGACCC TERM 2856 2145551 - 2145577 + G 87 -8.6 -4.57837 | overlap 2145553 CAGCGCTGGCTGGAG CATCGCCGTCAG GTG CTGACGCCGGAG TTTTTACAACAGTAT sbcB 2144261 - 2145691 + | exonuclease I TERM 2857 2145697 - 2145715 + T 71 -9.6 -3.14132 | opp_overlap 2145696 2145700, overlap 2145700 GATTGTGTAATTGAC CAATGCCT GAC GGGCATTG TTAATCCAGAGCGGA TERM 2858 2145799 - 2145781 - T 100 -16 -5.73978 | opp_overlap 2145781 ATGACAAACAAAAAA CCGGAGGC ACT GCCTCCGG TTTTACTATTGCCGA TERM 2859 2145781 - 2145799 + T 100 -16 -4.4261 | opp_overlap 2145781 ATGACAAACAAAAAA CCGGAGGC ACT GCCTCCGG TTTTACTATTGCCGA yeeF 2147191 - 2145827 - | putative amino acid transport protein TERM 2860 2147369 - 2147342 - R 100 -9.2 -5.63103 | opp_overlap 2147345 TTTGAAGCAAAAAAA TAACCGACGCGT ATTA AAACGTCGGTTA GTGTCATTTTTTGCA yeeY 2148385 - 2147471 - | putative transcriptional regulator TERM 2861 2148326 - 2148337 + g 77 -4.4 -4.83615 | overlap 2148321 TGCCGACGCCGCCGC GAAG CTGC CTTC TTTTTCTAACGCATC yeeZ 2149255 - 2148431 - | putative dehydratase TERM 2862 2149144 - 2149161 + g 81 -8.4 -4.26076 | TCATACGGGCCGCTT CCACCC CGTCAA GGGTGG TTTTGCTGCCGGTAA TERM 2863 2149559 - 2149533 - H 100 -22.4 -3.99405 | opp_overlap 2149533 TGAACGCATGAGAAA GCCCCCGGAAGA TCA TCTTCCGGGGGC TTTTTTTTTGGCGCG TERM 2864 2149533 - 2149559 + H 100 -22.4 -6.06723 | opp_overlap 2149533 TGAACGCATGAGAAA GCCCCCGGAAGA TCA TCTTCCGGGGGC TTTTTTTTTGGCGCG TERM 2865 2150471 - 2150461 - g 71 -8.2 -3.89617 | opp_overlap 2150463 ATGGAGAAACTGAAA GCGC TTG GCGC CAGCTCGATTCTGGT hisG 2149615 - 2150514 + | ATP phosphoribosyltransferase TERM 2866 2150827 - 2150798 - g 93 -11.5 -4.44974 | gap 1 CTAAATTTGATAAAA CAGAAGTGACAGCG CTA CGC-GTCACCCCTG AAGAGATCGCCGCCG hisD 2150617 - 2151921 + | histidinol dehydrogenase hisC 2151918 - 2152997 + | histidinol-phosphate aminotransferase TERM 2867 2153786 - 2153810 + G 76 -10.7 -3.62096 | opp_overlap 2153786, overlap 2153788 CTACCGATGGATGAA TGTCTGGCGCG CTG CGCGCTGGATA TTTCCGGTCGTCCGC TERM 2868 2153788 - 2153808 + G 75 -11.1 -3.39018 | opp_overlap 2153786, overlap 2153786 ACCGATGGATGAATG TCTGGCGCG CTG CGCGCTGGA TATTTCCGGTCGTCC hisB 2152994 - 2154061 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 2154058 - 2154651 + | imidazole glycerol phosphate synthase subunit HisH hisA 2154651 - 2155388 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 2155370 - 2156146 + | imidazole glycerol phosphate synthase subunit HisF TERM 2869 2156207 - 2156183 - g 84 -6.3 -5.03314 | overlap 2156184 TGGACTGGGAAAAAA CCGATGGCCTG ATG CCAGCCATCGT GCAACATGCGGTATC TERM 2870 2156206 - 2156184 - g 71 -9.8 -3.61506 | overlap 2156183 GGACTGGGAAAAAAC CGATGGCCTG ATG CCAGCCATCG TGCAACATGCGGTAT hisI 2156140 - 2156751 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 2871 2156787 - 2156753 - T 87 -14.4 -2.83073 | opp_overlap 2156763, overlap 2156763 AGCGTCATCAATAAG CGTAAAAAAACCGGGC AAT GCCCGGTTTTTTAATG AGAAATTTTACCTGT TERM 2872 2156777 - 2156763 - T 100 -12.8 -5.48303 | opp_overlap 2156763, overlap 2156753 ATAAGCGTAAAAAAA CCGGGC AAT GCCCGG TTTTTTAATGAGAAA TERM 2873 2156763 - 2156777 + T 100 -12.8 -5.14563 | opp_overlap 2156763 2156753 ATAAGCGTAAAAAAA CCGGGC AAT GCCCGG TTTTTTAATGAGAAA wzzB 2157815 - 2156832 - | lipopolysaccharide O-antigen chain length regulator TERM 2874 2157216 - 2157236 + g 74 -4.7 -4.77036 | GCGCAACGCTTCTTC GATTTGCTT AAT ACGCAGATC TTTTTGCTCCTGCGC TERM 2875 2157949 - 2157930 - R 70 -10 -3.10244 | opp_overlap 2157930, overlap 2157927 TTGGTCAATAAATCA TCGGGACT CATC AGCCCCGA TTGCCTTATTAATCA udg 2159124 - 2157958 - | UDP-glucose/GDP-mannose dehydrogenase TERM 2876 2159341 - 2159323 - R 100 -11.7 -6.06529 | opp_overlap 2159318 TAGAGATAAAAAAAA GCCCGGT ATTAA ACCGGGC TTAAACATTTTTGCA gnd 2160767 - 2159361 - | 6-phosphogluconate dehydrogenase rfbP 2162361 - 2160931 - | undecaprenol-phosphate galactosephosphotransferase/O-antigen transferase TERM 2877 2161213 - 2161203 - G 76 -5.4 -4.82667 | TTAGTACATTAAAAA GTTG TGG CAAC TCATCAAGGCTAGTT rfbK 2163866 - 2162433 - | phosphomannomutase rfbM 2165292 - 2163853 - | mannose-1-phosphate guanylyltransferase rfbN 2166237 - 2165293 - | rhamnosyl transferase rfbU 2167299 - 2166238 - | mannosyl transferase TERM 2878 2167003 - 2167023 + g 85 -2.5 -5.4505 | overlap 2167004 CAGTAAGGGGATAGT GTGATGTGT AGT ACACACCAA TTTTTTATTACCAAA rfbV 2168620 - 2167619 - | abequosyltransferase TERM 2879 2168071 - 2168086 + g 74 -3.2 -4.86226 | opp_overlap 2168071 AGGACGCATCAAAAT CAATGG CATC CCATCG TTCTTTTTTTACTAT rfbX 2169917 - 2168625 - | putative O-antigen transferase rfbJ 2170898 - 2169999 - | CDP-abequose synthase TERM 2880 2170234 - 2170244 + g 80 -5.4 -4.94487 | TGATACTCAGTATAT GAAG GTA CTTC TTTTCTATTTTCTAA TERM 2881 2170937 - 2170921 - R 75 -6.7 -4.43576 | ACCAGATAGAATAAA TTGAATT AGA AATTCAA ACCAAAGAACTCTTC rfbH 2172239 - 2170926 - | CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase TERM 2882 2171746 - 2171759 + g 78 -6.7 -4.62475 | TTACCGAGTGTATGA GCGAT CATT ATCGC TTTTGATTTCTCAGT rfbG 2173345 - 2172266 - | CDP glucose 4,6-dehydratase rfbF 2174123 - 2173350 - | glucose-1-phosphate cytidylyltransferase rfbI 2175112 - 2174120 - | CDP-6-deoxy-delta-3,4-glucoseen reductase TERM 2883 2174298 - 2174274 - G 78 -6.5 -4.53034 | overlap 2174277 TCTAGAGAATCAAAA TCATCCATCAC GGC ATGATGGACAA ATCCCTTTCTTCCCC TERM 2884 2174616 - 2174605 - G 71 -4.4 -4.59853 | GTAACTCCCCAAAAA TGAG CGAA CTCA TCTGACCATTGGGAA rfbC 2175669 - 2175118 - | dTDP-4,deoxyrhamnose 3,5 epimerase rfbA 2176548 - 2175670 - | dTDP-glucose pyrophosphorylase TERM 2885 2176585 - 2176572 - R 81 -8.1 -4.55287 | opp_overlap 2176572 2176584 CTCATTCATAGAAAA TGCCC TGAT GGGCA TTTAAATTTATTAGA TERM 2886 2176572 - 2176585 + r 74 -8.1 -3.93262 | opp_overlap 2176572, overlap 2176584 CTCATTCATAGAAAA TGCCC TGAT GGGCA TTTAAATTTATTAGA rfbD 2177495 - 2176596 - | dTDP-4-dehydrorhamnose reductase rfbB 2178580 - 2177495 - | dTDP-glucose 4,6 dehydratase TERM 2887 2177900 - 2177924 + g 71 -8.6 -3.91911 | overlap 2177901 ATCGCGAATCTGATC CCCTTTGCCA TAAAT TGGCAAAGGC TTTCCTTCCAGTGCG TERM 2888 2177901 - 2177923 + g 75 -12.1 -2.94825 | overlap 2177900 TCGCGAATCTGATCC CCTTTGCCA TAAAT TGGCAAAGG CTTTCCTTCCAGTGC TERM 2889 2178125 - 2178137 + g 80 -9.1 -4.20696 | opp_overlap 2178123 TTCAGTAAATAACGG CAGCG TAA CGCTG TTTTCAACTTCATCA TERM 2890 2178914 - 2178863 - R 100 -10.1 -4.75518 | opp_overlap 2178863 TATACAAAACTAAAA CGGCAGTCAACACTCGTTTCAGC CAACTT GCCGCTTCGAATGTTCACTGCCG TTATTATGTTTATCA galF 2179850 - 2178957 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalF wcaM 2181431 - 2180028 - | putative colanic acid biosynthesis protein wcaL 2182662 - 2181442 - | putative glycosyl transferase wcaK 2183939 - 2182659 - | putative pyruvyl transferase wzxC 2185439 - 2183961 - | colanic acid exporter wcaJ 2186966 - 2185572 - | putative UDP-glucose lipid carrier transferase TERM 2891 2185632 - 2185619 - G 72 -2.4 -4.86033 | overlap 2185607 AAATCGTCAGAAAAA CGAT TTTGAT ATCG AACCAAATACTCCAT cpsG 2188390 - 2187020 - | phosphomannomutase manC 2189937 - 2188501 - | mannose-1-phosphate guanylyltransferase TERM 2892 2189697 - 2189725 + g 76 -11.7 -3.01924 | opp_overlap 2189695 GCTCAAGAATAATGT TCTCCGTCAGCTT ATT GAGCTGGCGGAGC TGTTCGGCAACGATA wcaI 2191163 - 2189940 - | glycosyl transferase wcaH 2191663 - 2191160 - | GDP-mannose mannosyl hydrolase TERM 2893 2191421 - 2191394 - GR 70 -4.9 -4.41548 | gap 2 CCAGACGCCATAAAA CGT-C-CCTGCCG CCAG CGGCAGACGCACG CCCAGTTCCGCCTGC wcaG 2192600 - 2191635 - | GDP-fucose synthetase TERM 2894 2192299 - 2192332 + gr 77 -11.1 -3.24235 | overlap 2192297 CCGAGAAACAGCAGT TTGTTCACGTTGTGC AGGT GCGCGGCGTGAATAA TGTTGCTCTCTATCA gmd 2193724 - 2192603 - | GDP-D-mannose dehydratase TERM 2895 2192683 - 2192715 + g 70 -9.1 -3.71649 | overlap 2192684 2192686 2192692 CCTCCAGATCGTTCG CCACCATCTCGGAGA CCA TCTCCGACAGGGTGA TTTCCGGTTTCCAGC TERM 2896 2192684 - 2192714 + g 76 -12.6 -2.82668 | overlap 2192683 2192686 2192692 CTCCAGATCGTTCGC CACCATCTCGGAGA CCA TCTCCGACAGGGTG ATTTCCGGTTTCCAG wcaF 2194302 - 2193748 - | putative colanic acid biosynthesis acetyltransferase WcaF wcaE 2195064 - 2194318 - | glycosyl transferase wcaD 2196291 - 2195077 - | putative colanic acid biosynthesis protein TERM 2897 2195788 - 2195775 - GR 71 -4.5 -4.64861 | CCGGTTCAAAATAAA GCGCA GTGG TACGC TTACCGCCAAATTTT wcaC 2197483 - 2196266 - | glycosyl transferase TERM 2898 2196361 - 2196344 - GR 71 -7.7 -3.84825 | gap 1 GCTACGCATACGAAA GGCGTCCA GCG TGG-CGCC AAATACCGCCTGAGC TERM 2899 2197096 - 2197111 + gr 76 -5.4 -4.70879 | gap 1 CGTGCAACGTCCAGA CCAG-CG TGA CGTCTGG TTTTTGCGCTTTGAC wcaB 2197968 - 2197480 - | putative colanic acid biosynthesis acetyltransferase WcaB TERM 2900 2197718 - 2197703 - G 80 -9 -4.19238 | opp_overlap 2197677 2197705 TGGCGAATGGTAAAA TCGTCG CCGG CGACGA CATGTTTGTTGATCA wcaA 2198813 - 2197971 - | glycosyl transferase TERM 2901 2198869 - 2198895 + r 86 -2.9 -5.64421 | gap 1, overlap 2198873 2198875 GTCCGGCCTACAGTC TCAGGCCGCGCC ATCC GGCAC-GCCTTA TTTTTTATTTGGAAT TERM 2902 2198873 - 2198892 + r 76 -4.8 -4.88687 | overlap 2198869 2198875 GGCCTACAGTCTCAG GCCGCGCC ATCC GGCACGCC TTATTTTTTATTTGG wzc 2201059 - 2198900 - | tyrosine kinase TERM 2903 2201034 - 2201047 + g 76 -3.1 -5.01497 | CTACCCGTAACCGCC GCAGA TTGT TTTGC TTTTTCTGTCATGGT wzb 2201505 - 2201056 - | tyrosine phosphatase wza 2202650 - 2201511 - | putative outer membrane polysaccharide export protein TERM 2904 2201769 - 2201759 - G 74 -2.4 -4.99861 | GACGAATCACAAAAA TGCC GCT GGCG TTGGAGGTGGTCAGA TERM 2905 2203522 - 2203547 + G 78 -6.9 -4.62069 | gap 1 GCTGGCGTCAATCTC GTGGC-TGGTCA CCT TGACTAAGCCGC TTTTTAGCGTACAGG yegH 2203325 - 2204905 + | putative inner membrane protein TERM 2906 2204936 - 2204978 + T 86 -12 -3.53224 | gap 2, overlap 2204937 CCCGGTCTGCTTACC AGGCAG-GCCGGA-GGCGCG TTAGC CTCGCCATCCGGCTCTGCCC TTTGGCCAAAAACTA TERM 2907 2204937 - 2204977 + T 90 -15.5 -2.71791 | gap 2, overlap 2204936 CCGGTCTGCTTACCA GGCAG-GCCGGA-GGCGCG TTAGC CTCGCCATCCGGCTCTGCC CTTTGGCCAAAAACT asmA 2206847 - 2204991 - | putative assembly protein TERM 2908 2205477 - 2205494 + g 73 -5.5 -4.55128 | TTCAAGGCGCGTATT GCTCATG TCAA CATGCGC TTTTCCTTTCCAGCT TERM 2909 2206401 - 2206376 - G 80 -8.9 -4.09685 | TTTCATGCTGGAAAA CCAGCACGCTG TCGG CAACGCGCAGG CTACGAATATCAAAC dcd 2207467 - 2206886 - | deoxycytidine triphosphate deaminase TERM 2910 2207008 - 2206992 - G 70 -6.5 -4.09243 | GACAGCGGCTCAAAA CTCAGCG CGC CGATGAG CATACCCGGACGCAA udk 2208199 - 2207558 - | uridine kinase TERM 2911 2209214 - 2209234 + G 95 -5.4 -5.31158 | gap 1 ATGTGGAGTGCGGTG CGCCTGCCG CGAA TGG-AGGCG TTTTTAATTTTTTTA yegE 2208530 - 2211520 + | putative diguanylate cyclase/phosphodiesterase alkA 2212357 - 2211488 - | 3-methyl-adenine DNA glycosylase II yegD 2212491 - 2213843 + | putative chaperone TERM 2912 2214020 - 2214039 + F 86 -11.4 -3.71649 | overlap 2214030 CCTTTCCTTATTTTG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG STM2126 2214284 - 2215525 + | multidrug efflux system subunit MdtA TERM 2913 2216637 - 2216685 + G 72 -2.2 -4.92239 | overlap 2216639 2216640 2216642 2216652 CGCCACAATTATTCC CGGCGTCGCCGTACCGCTGTCG CTTAT CGGCACCTTTGCGGTGATGGTG TTTTTGGATTTTTCC TERM 2914 2216821 - 2216809 - g 84 -6.2 -5.1286 | GAAAAAGGAGAAAAA CCGC TGGCG GCGG CGCTCAAAGGCGCGG TERM 2915 2218062 - 2218046 - g 91 -7.9 -5.1287 | TCGATACGGAAAAAA CGCTCGC CCT GCCAGCG GATATTACAACGCAG TERM 2916 2218100 - 2218129 + G 76 -9.9 -3.78934 | overlap 2218101 GTAGTACGCTCGCCT TCCAGGCGGCGCT AGGC AGCACCGTCTGGC TTATTGTCGCCGCCG TERM 2917 2218101 - 2218128 + G 81 -13.4 -2.87146 | overlap 2218100 TAGTACGCTCGCCTT CCAGGCGGCGCT AGGC AGCACCGTCTGG CTTATTGTCGCCGCC yegN 2215525 - 2218647 + | multidrug efflux system subunit MdtB TERM 2918 2221423 - 2221407 - g 76 -3 -5.07486 | gap 1, opp_overlap 2221407 2221409, overlap 2221389 2221409 CATTGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTTGAAG yegO 2218648 - 2221728 + | multidrug efflux system subunit MdtC TERM 2919 2222549 - 2222567 + G 86 -12.4 -3.86015 | overlap 2222539 TTTTGCCGGGCGTAT CGGCAGCG GTA TGCTGCCG TTTATGACGCCGGTC TERM 2920 2223049 - 2223069 + G 73 -5.5 -4.57569 | TATGTATGGCGGTTA TTATCGC GCTACCG GCGATAA TTTTTGCCCGCGTGC yegB 2221725 - 2223137 + | multidrug efflux system protein MdtE TERM 2921 2223660 - 2223682 + G 72 -4 -4.7254 | overlap 2223651 2223661 TCGTGGCGTTATCAA CGTTGCTGGC CGC GCTGGCGACA TTTTTGCTGGCGCGT baeS 2223137 - 2224540 + | signal transduction histidine-protein kinase BaeS baeR 2224537 - 2225259 + | DNA-binding transcriptional regulator BaeR TERM 2922 2225645 - 2225658 + F 78 -5.3 -4.98857 | opp_overlap 2225634 GAAATTATCCAGCGC TGGTT AAGC AACCA TTTTTATCGTTGGAT TERM 2923 2225961 - 2225949 - g 79 -3.3 -5.1861 | overlap 2225950 CGGAGCATCAAAAAA TGCAG CGC CTGCG TGAACAAGGTTGGTA TERM 2924 2226535 - 2226559 + G 75 -12.8 -2.55818 | overlap 2226527 ACAGTGGCTGCTGCT GCACAGCGCC CCGGA GGCGCTGCGC TACCTTCAGGTTGTT STM2133 2225846 - 2226730 + | putative cytoplasmic protein TERM 2925 2226808 - 2226796 - g 81 -2.6 -5.39407 | overlap 2226797 2226798 TACAAAAAAAACAAA CCGC TGATT GCAG CCCGTATCGCCGAGG TERM 2926 2227051 - 2227017 - g 100 -14.2 -4.18018 | opp_overlap 2227016 GGGCTTGAGCGAAAA CCTCGACGGCGCGGCG TTA CGCCACAAGGTCGAGG ATATCTTACGCCGCT STM2134 2226730 - 2227446 + | putative inner membrane protein TERM 2927 2227529 - 2227513 - g 72 -2.1 -4.98255 | overlap 2227514 GTGCAACCACAAAAA TCCCCTC AAT GACGGGC AACGAGAGTGGCATA TERM 2928 2227758 - 2227744 - g 70 -3.4 -4.7254 | overlap 2227745 2227746 AGCGCTGATCAAAAA CTGGCA GCG CGCCCG TCCTCGCTCCACTCA STM2135 2227457 - 2229568 + | putative inner membrane protein TERM 2929 2230325 - 2230308 - g 71 -6.3 -4.34008 | overlap 2230324 CAGGAAGGAAAAGAA GACGTTG TCGG CAACATC GTGCATAAGCATGAA yegQ 2229684 - 2231045 + | putative protease TERM 2930 2231179 - 2231210 + F 100 -9.5 -5.13473 | overlap 2231182 CCAGGAACCACCTCC TTGGCCTGCGTAA TCTCCC TTACGCAGGCTTA TTTTTTGCGTATAAT TERM 2931 2231182 - 2231207 + F 100 -13.4 -4.65666 | overlap 2231179 GGAACCACCTCCTTG GCCTGCGTAA TCTCCC TTACGCAGGC TTATTTTTTGCGTAT STM2137 2231496 - 2232542 + | putative cytoplasmic protein STM2138 2232994 - 2232578 - | putative cytoplasmic protein STM2139 2233451 - 2233116 - | putative inner membrane protein STM2139.2n 2233929 - 2233813 - | hypothetical protein TERM 2932 2234495 - 2234481 - g 74 -8.5 -3.99805 | opp_overlap 2234480 CCGGAAAAACTTAAA GCCGC ATTGG GCGGC GTCTCCTATCTTATC yegS 2234013 - 2234912 + | lipid kinase TERM 2933 2234928 - 2234949 + T 100 -11.6 -4.78572 | TAACACCTGTCGCTG GCCGGATG CGCTCA CATCCGGC TTTTCTTCGTTGAAC fbaB 2236017 - 2234965 - | fructose-bisphosphate aldolase TERM 2934 2236377 - 2236365 - g 83 -6.2 -4.87803 | TATGGCTAAATAAAA GCGG GTTTT CCGC CGGTGAAATAGGCTG TERM 2935 2236437 - 2236458 + G 90 -5.1 -5.24129 | overlap 2236429 2236438 TCCTGTCGCCGATTC TGGTCGG CTCCGTTA CCGACCG TTTTTTCTCAGCGCA TERM 2936 2236891 - 2236907 + G 77 -3.7 -4.99312 | GCTGGTCCTGCTGCG CGATAAA AAC TTTCTCG TTTTCTTCTTCTGTT TERM 2937 2237121 - 2237131 + G 81 -2.4 -5.4251 | overlap 2237112 TTATTACCGCCGCGA TCCG CTA CGGC TTTTTTGTCTATGGC yegT 2236271 - 2237542 + | putative transport protein yegU 2237539 - 2238543 + | putative glycohydrolase yegV 2238540 - 2239505 + | putative sugar kinase yegW 2240225 - 2239479 - | putative regulatory protein thiD 2241061 - 2240261 - | phosphomethylpyrimidine kinase TERM 2938 2240716 - 2240727 + g 74 -7.2 -4.08216 | opp_overlap 2240716, overlap 2240714 CAGAGGGCGAGAGCA GCGG ATCG CCGC TTTTCGCCAGCATCA thiM 2241845 - 2241048 - | hydroxyethylthiazole kinase STM2148 2242255 - 2242569 + | putative periplasmic protein TERM 2939 2242595 - 2242575 - T 100 -8.2 -5.64274 | opp_overlap 2242591, overlap 2242576 TCATCGATAAAAAAA GCCCCCTC ATCCA GAGGGGGA AATACAGCCCCATGT TERM 2940 2242594 - 2242576 - T 95 -11.7 -3.9748 | opp_overlap 2242591, overlap 2242575 CATCGATAAAAAAAG CCCCCTC ATCCA GAGGGGG AAATACAGCCCCATG TERM 2941 2242752 - 2242785 + T 70 -8.9 -3.36785 | opp_overlap 2242748 2242745, overlap 2242753 TGCAGAAAGATTGTC ATCCCGGTCACTTAT TATT GTAAGTGACCGGAAG TTCATTCACCTATCG TERM 2942 2242753 - 2242784 + T 78 -12.4 -2.6175 | opp_overlap 2242748 2242745, overlap 2242752 GCAGAAAGATTGTCA TCCCGGTCACTTAT TATT GTAAGTGACCGGAA GTTCATTCACCTATC stcD 2243839 - 2242832 - | putative outer membrane lipoprotein TERM 2943 2243837 - 2243827 - G 75 -4 -4.93898 | opp_overlap 2243827 ACATCACGATAAAAA GAAA GAG TTTC ATTTCACCACCTCAC stcC 2246344 - 2243855 - | putative outer membrane protein TERM 2944 2244936 - 2244950 + g 76 -5 -4.72127 | overlap 2244937 TCGTATACATCATTC TTATCG CGA CGATAG TTATTTTTATTATTG TERM 2945 2245722 - 2245737 + g 74 -4.6 -4.70169 | TTGCTTTTCCACTCA CCGCTG CTGC CATCGG TTTTATTAAATGTGG stcB 2247041 - 2246358 - | putative periplasmic chaperone protein TERM 2946 2247068 - 2247087 + r 73 -10.6 -3.10409 | opp_overlap 2247068 CTTGCTTATAAAAAA CCGGCGAC GAAC GCCGCCGG TTGAATAAATTAGTC TERM 2947 2247087 - 2247068 - R 100 -12.8 -5.24129 | opp_overlap 2247068 CTTGCTTATAAAAAA CCGGCGAC GAAC GCCGCCGG TTGAATAAATTAGTC stcA 2247627 - 2247097 - | putative fimbrial-like protein TERM 2948 2247887 - 2247858 - R 100 -18.1 -5.82036 | ACAACAAATAAAAAA GCCCATATCATTG ATAT CAATGATATGGGC CTGCGGAATTAATAA yehE 2248187 - 2247906 - | putative outer membrane protein TERM 2949 2248394 - 2248439 + r 83 -10.7 -3.82946 | opp_overlap 2248397 2248399 2248433, overlap 2248397 2248399 2248401 GGGCTATTATTTTAT TAATACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTCATA TTCTCTTTGGAATAC TERM 2950 2248397 - 2248437 + r 79 -10.8 -3.49634 | gap 1, opp_overlap 2248397 2248399 2248433, overlap 2248394 2248399 2248401 CTATTATTTTATTAA T-ACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTCA TATTCTCTTTGGAAT TERM 2951 2248436 - 2248397 - R 90 -14.6 -3.17212 | opp_overlap 2248397 2248394 2248399 2248401, overlap 2248399 2248433 CTATTATTTTATTAA TACATTCACTGCATCAAT ATAT ATTAATGCAGTGAATGTC ATATTCTCTTTGGAA TERM 2952 2248434 - 2248399 - R 100 -17.2 -3.1478 | opp_overlap 2248397 2248394 2248399 2248401, overlap 2248397 2248433 ATTATTTTATTAATA CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG TCATATTCTCTTTGG TERM 2953 2248399 - 2248434 + r 93 -15 -2.88134 | opp_overlap 2248399 2248397 2248433, overlap 2248397 2248394 2248401 ATTATTTTATTAATA CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG TCATATTCTCTTTGG TERM 2954 2248401 - 2248432 + r 78 -11.8 -2.97857 | opp_overlap 2248399 2248397, overlap 2248399 2248397 2248394 TATTTTATTAATACA TTCACTGCATCAAT ATAT ATTAATGCAGTGAA TGTCATATTCTCTTT mrp 2249574 - 2248465 - | putative ATPase TERM 2955 2250270 - 2250308 + G 81 -2.2 -5.28942 | GAACCGAAATCCGTG GTGTCCGGCGCGACGC CGGTAAT GCGTGACTCCGAGCAC TTTTTCTTTGACCTG TERM 2956 2251157 - 2251143 - g 70 -7 -4.08557 | GTGGCTAAACAAGAA GGCCGC GAC GCGGAC CTGCAGGCCATTTGC TERM 2957 2251655 - 2251667 + G 70 -9.1 -3.63627 | CGCCAACCTCGCGCC GCGCA AAA TGCGC TTTGGCGTCTCCGAG metG 2249739 - 2251772 + | methionyl-tRNA synthetase TERM 2958 2251780 - 2251797 + F 100 -12.7 -5.03145 | opp_overlap 2251780 2251773 TGAAATAAGCAACAA GCCGGAG CATG CTCCGGC TTTTTTAACCGCTTA TERM 2959 2251797 - 2251780 - f 95 -12.7 -3.93237 | opp_overlap 2251780, overlap 2251773 TGAAATAAGCAACAA GCCGGAG CATG CTCCGGC TTTTTTAACCGCTTA yehR 2252013 - 2252471 + | putative lipoprotein TERM 2960 2252515 - 2252534 + F 100 -11.4 -5.01553 | overlap 2252509 GGTAAAGTCGCTCAG GGCGCTGC TTCG GCAGCGTC TTTTCTTTATGAATT TERM 2961 2252573 - 2252559 - f 76 -4.2 -5.055 | overlap 2252561 TGAATTCCGAAAAAA GACAGC CTC GCTGTA AGTCCCCTCGCCAAA TERM 2962 2252571 - 2252561 - f 71 -6.8 -4.15235 | overlap 2252559 AATTCCGAAAAAAGA CAGC CTC GCTG TAAGTCCCCTCGCCA STM2156A 2252643 - 2253173 + | hypothetical protein yehS 2253697 - 2253230 - | putative cytoplasmic protein yehT 2254463 - 2253744 - | putative two-component response-regulatory protein YehT yehU 2256145 - 2254460 - | putative sensor kinase TERM 2963 2256312 - 2256297 - H 79 -3.2 -5.31456 | TTAATGCATAAAAAA CAGGCA AAAC TTCCTG GTTCCTAAAAGAGCG TERM 2964 2256968 - 2256985 + G 71 -9.9 -3.53012 | GCGCATTCGCTTAGC CAGTTCC GCCC GGAACTG TTTGACGGCAAGACG TERM 2965 2257034 - 2257024 - g 74 -6.8 -4.37092 | overlap 2257025 2257027 2257029 ATGGTGCGGAGAAAA CCAG ACG CTGG CGCAGCAGCAGCAAC yehV 2256368 - 2257099 + | putative transcriptional repressor STM2161 2257159 - 2257266 + | hypothetical protein yehW 2257978 - 2257247 - | putative ABC-type proline/glycine betaine transport system permease component yehX 2258909 - 2257962 - | putative ABC-type proline/glycine betaine transport system ATPase component TERM 2966 2258302 - 2258326 + g 95 -17.9 -2.80816 | opp_overlap 2258299 ATCAGCACCAGATGG TCGGCGAGGCG TAG CGCCTCGTCGA TGTCGTGCGTCACCA yehY 2260071 - 2258902 - | putative ABC-type proline/glycine betaine transport system permease component TERM 2967 2259848 - 2259819 - G 81 -3.6 -5.22006 | gap 2 GCATGACAATAAAAA GCGT-CTG-CGCCA TCAT CAGCGTCAGTACGC TACCGCGTTTACCGG yehZ 2260992 - 2260075 - | putative transport protein TERM 2968 2260342 - 2260364 + g 83 -9.9 -4.15044 | gap 1 GTCGGTGCCATACGC CATCGCGGCG TTAA CGCCG-GATG TTTGTTGCGCGGCGG TERM 2969 2260752 - 2260729 - G 76 -3 -5.03314 | opp_overlap 2260734 2260735, overlap 2260734 TTCATCTTTAAAAAA GAACGCCCCG TTAC CGGTGTATTC CGGATAGATATCCAG bglX 2263470 - 2261173 - | periplasmic beta-D-glucoside glucohydrolase TERM 2970 2263859 - 2263881 + G 88 -11.2 -4.18164 | CAAGGGTTTCCGTTC CGGTCAGGGC GAC GCGCTGGCCG TTGTTTTCCCGGGTT TERM 2971 2264503 - 2264520 + G 71 -4.7 -4.66833 | overlap 2264504 TTGAATCTTCCGGCT GCGCCGG AAAA CTGGCGG TTTTTGCCGTTCGCC TERM 2972 2264977 - 2264989 + G 70 -6.9 -4.19678 | opp_overlap 2264977 2264976 ATGAATTTTTTAAAT CCGCT GAG GGCGG TTTCTTCACCTGTAC dld 2263737 - 2265467 + | D-lactate dehydrogenase pbpG 2266472 - 2265525 - | D-alanyl-D-alanine endopeptidase TERM 2973 2265568 - 2265584 + g 91 -6.5 -5.2197 | overlap 2265558 2265563 GCACTGGCGCTGGCT GCCGC CATTTGC GCGGC TTTTTGCTTTTTATA TERM 2974 2266591 - 2266614 + r 71 -6.8 -4.07687 | gap 1, overlap 2266608 2266609 CGCTACAGAAGAATC GTCAGCAAATG CTG CAT-TGCTGGC TTTTGCGCCAGCCCT yohC 2267225 - 2266638 - | putative transport protein TERM 2975 2266819 - 2266808 - G 91 -7.2 -5.00884 | AGCCGGTGTAAAAAA GCGC GACA GCGC CGACCAGTGCGCATA TERM 2976 2267148 - 2267160 + g 73 -6.3 -4.44277 | GTGCGTATAGTGATG CGAAA CAG TTTCG TTTTCGCTTTTGATC TERM 2977 2267336 - 2267321 - H 71 -6.8 -4.07885 | gap 1, opp_overlap 2267312 TAGTCTCCGGCAAAA CGTCGGC TTT GCCG-CG CACGCCTCTTGCCAG yohD 2267357 - 2267953 + | hypothetical protein TERM 2978 2267957 - 2268000 + T 74 -5.8 -4.72188 | opp_overlap 2267955 2267956 2267979 2267980, overlap 2267988 GAGGCCCGTTAAACC CGATGGTATCCGGATGGC ATAACGCC GCCATCCGGCACCCGGCG TTTATTTTGCGTTGA yohF 2268763 - 2268002 - | acetoin dehydrogenase yohG 2270265 - 2268829 - | multidrug resistance outer membrane protein MdtQ TERM 2979 2269315 - 2269303 - G 73 -6.2 -4.39426 | GATATCGGGATAAAA CGCG GCCTT CGCG GCGTCAATGCTGCTC TERM 2980 2269768 - 2269789 + g 87 -8.6 -4.58395 | TTTGACCGCCCCGAT CCGCGCAG TAACTT CAGCGCGG TTTTTCCCCCATAAA TERM 2981 2270669 - 2270705 + r 77 -10.8 -3.30771 | overlap 2270668 GATGATTTTCTGATT CCTGCGCCGGGCAG CGATAGTAT CTGCCCGGCACACG TTCTGGACGCTGTAG yohI 2271662 - 2270724 - | tRNA-dihydrouridine synthase C TERM 2982 2271408 - 2271423 + g 77 -8.2 -4.07568 | ATACGATCCCAACGC CGTCGC CCGC GCGGCG TTTTCCGCCAGCCAC TERM 2983 2271705 - 2271685 - R 100 -11.9 -5.58454 | opp_overlap 2271687 TCCACAGCAAAAAAA GAGGCGCTA TCA TAACGCCTC TCTGCGATGAGCAAA STM2175 2272964 - 2271771 - | salicylate hydroxylase STM2176 2273623 - 2272979 - | putative glutathione S-transferase STM2177 2274333 - 2273632 - | putative flutathione S-transferase STM2178 2275386 - 2274349 - | putative 1,2-dioxygenase STM2179 2276756 - 2275398 - | putative sugar transporter STM2180 2276882 - 2277790 + | putative transcriptional regulator TERM 2984 2277978 - 2277997 + G 84 -5.7 -5.10461 | TTTTGTATTGATTTA TGCCTGT TTGTAC GCAGGCA TTTTTCTTGCATCAC yohJ 2277922 - 2278320 + | hypothetical protein TERM 2985 2278342 - 2278361 + G 75 -6.4 -4.56597 | ATATCTGGTGGTCGT TACCGCTG ACGC TGGCGGTA TTTTTCGCCGCCCGC TERM 2986 2278365 - 2278390 + G 86 -10.3 -4.14511 | ACGCTGGCGGTATTT TTCGCCGCCCG CCGA CTGGCGGCGCA TTTTAAAATGCCGTT yohK 2278317 - 2279012 + | hypothetical protein cdd 2279166 - 2280050 + | cytidine deaminase TERM 2987 2280818 - 2280828 + G 95 -8.2 -5.00884 | opp_overlap 2280818 CTCTATATTTTTAAA CGCG AAC CGCG TTTTTTAGGCCCGCT sanA 2280227 - 2280946 + | hypothetical protein b2145 2280943 - 2281188 + | putative inner membrane protein TERM 2988 2281874 - 2281858 - g 76 -5 -4.75372 | overlap 2281860 ACCATTTACGAAAAA CAGCCG CAGCC CGGCGG ATGGCTGCGTCACGG TERM 2989 2281885 - 2281860 - g 71 -7.5 -3.99327 | overlap 2281858 CATTTACGAAAAACA GCCGCAGCC CGGCGGAT GGCTGCGTC ACGGCATCCCGGCAT STM2186 2281393 - 2282634 + | putative oxidoreductase TERM 2990 2283116 - 2283102 - g 71 -4.2 -4.58283 | opp_overlap 2283107 GAACTGGTTGAAAAA TACTGC CGC GCCGTA AAACGCGGTTCATCT yeiA 2282628 - 2283863 + | dihydropyrimidine dehydrogenase TERM 2991 2283905 - 2283877 - T 74 -10.2 -3.14211 | gap 1, opp_overlap 2283878 AGCTCTCGGTATGAA GCCCGGCGC-GCA GTTT CGCTGCGCCGGGT TATCTGATAAGCAAG TERM 2992 2283878 - 2283904 + T 90 -13 -3.54475 | gap 1, opp_overlap 2283877 GCTCTCGGTATGAAG CCCGGCGC-GC AGTTTC GCTGCGCCGGG TTATCTGATAAGCAA mglC 2284948 - 2283938 - | beta-methylgalactoside transporter inner membrane component TERM 2993 2284986 - 2285004 + r 79 -8.2 -4.25052 | opp_overlap 2284980 2284986 2284984, overlap 2284980 2284981 TGCAAAGAAGCAAGA CGCAAAAT TTC GTTTTGCG TTGTTGTTTTAGTAT mglA 2286484 - 2284964 - | galactose/methyl galaxtoside transporter ATP-binding protein mglB 2287616 - 2286618 - | galactose transport protein TERM 2994 2286719 - 2286735 + g 91 -10.1 -4.57569 | TGCCGTCAGCCGCGC CCTTGCC TTC GGCGAGG TTTTTCGCCAGATCG TERM 2995 2288086 - 2288069 - R 72 -6.3 -4.21989 | overlap 2288059 CACAATGTTAATAAA CTGTGAA TTTA CTCACAG ATTGAAAACGGTTAC galS 2289137 - 2288115 - | DNA-binding transcriptional regulator GalS yeiB 2290429 - 2289287 - | hypothetical protein TERM 2996 2289659 - 2289641 - G 90 -12.4 -3.9461 | CGCCTGCAATAAGAA GGCGCACC AGC GGTACGCC CAGTCCAGCCGCCAT folE 2291112 - 2290444 - | GTP cyclohydrolase I yeiG 2291442 - 2292179 + | putative esterase STM2195 2292676 - 2292287 - | putative transcriptional regulator STM2196 2294048 - 2292681 - | putative L-serine dehydratase TERM 2997 2293299 - 2293285 - G 84 -5.7 -5.00884 | AGCGCGGTTAAAAAA TCGCT GGCGG AGCGA TTAGCCTGTAACGTC STM2197 2294265 - 2295152 + | putative phosphoserine phosphatase STM2198 2295185 - 2296507 + | putative regulatory protein TERM 2998 2296548 - 2296508 - T 77 -10.3 -3.30124 | opp_overlap 2296512, overlap 2296510 2296511 CTGCATCGGTTATAA CATTCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGTCTC TGTCAGAAACGGTAA TERM 2999 2296546 - 2296510 - T 83 -12.9 -3.21924 | opp_overlap 2296512, overlap 2296508 2296511 GCATCGGTTATAACA TTCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGTC TCTGTCAGAAACGGT TERM 3000 2296545 - 2296511 - T 95 -16.4 -2.5294 | opp_overlap 2296512, overlap 2296510 2296508 CATCGGTTATAACAT TCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGT CTCTGTCAGAAACGG TERM 3001 2296512 - 2296544 + T 100 -19.2 -2.98823 | opp_overlap 2296511 2296510 2296508 ATCGGTTATAACATT CTGGCGACAGCGGC AAAAC GCGGCTGTCGCCAG TCTCTGTCAGAAACG cirA 2298542 - 2296551 - | colicin I receptor TERM 3002 2297721 - 2297733 + g 76 -5.5 -4.82901 | CAACGCATAGTTTTG CCGTT CCA GACGG TTTTTATCCAGCGAG TERM 3003 2298811 - 2298794 - R 100 -11.3 -6.07374 | AGAAAAAACAAAAAA CCCTCTC GAAT GAGAGGG TTAGAAGAGTCAGGT lysP 2300357 - 2298888 - | lysine transporter TERM 3004 2299323 - 2299313 - G 71 -8.2 -3.85698 | overlap 2299314 CGGTGGTGGCATAAA GCGC ATT GCGC GGTACGCCGCCGCGG TERM 3005 2300215 - 2300202 - G 74 -3.1 -4.92791 | gap 1, overlap 2300204 CAGAATATAAGAAAA CA-GCG CGC CGCCTG GCCCCGCCTGAGAAA TERM 3006 2300525 - 2300512 - R 71 -3.7 -4.80882 | opp_overlap 2300514, overlap 2300513 2300514 AGCGGATACTAAAAA TGGCG ATGC CGCCC GGGCAGCCCTCCTCT yeiE 2301410 - 2300547 - | putative DNA-binding transcriptional regulator TERM 3007 2302497 - 2302482 - g 76 -3.2 -5.09225 | AGCGCATTGAAAAAA GCGG GGGCGAAA CCGC TGCTGATGGCGCTGG yeiH 2301531 - 2302580 + | putative inner membrane protein TERM 3008 2302732 - 2302749 + G 70 -7 -4.07568 | overlap 2302731 GCGCGGCTGAAATTG GCGCAA CGGCCT TTGCGC TTTTCACAAAAAACC TERM 3009 2302954 - 2302917 - g 83 -7.8 -4.58283 | gap 1, overlap 2302943 GAAGCGCTGGAAAAA TCAC-GCGATGCCTTTC TCGAT GAAATGCAGCGCTGTGA ACAACTCGGCTTAAC nfo 2302659 - 2303516 + | endonuclease IV TERM 3010 2303535 - 2303572 + T 95 -12.9 -3.73486 | opp_overlap 2303545, overlap 2303545 TCAATGTTCTTCAGG CAATAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTAGCG TGTTTCTCTTATGCC TERM 3011 2303562 - 2303545 - T 100 -11.3 -5.4833 | opp_overlap 2303545 2303535 TCAGGCAATAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTAGCGTGTTT TERM 3012 2303545 - 2303562 + T 100 -11.3 -5.10077 | opp_overlap 2303545, overlap 2303535 TCAGGCAATAAAAAA GGCAGAG CGCG CTCTGCC TTTTTTAGCGTGTTT fruA 2305269 - 2303581 - | fructose-specific PTS system IIBC component fruK 2306224 - 2305286 - | 1-phosphofructokinase fruF 2307354 - 2306224 - | bifunctional fructose-specific PTS IIA/HPr protein TERM 3013 2307255 - 2307281 + g 71 -10.1 -3.55563 | gap 1, opp_overlap 2307241, overlap 2307275 2307277 AGCCGCCCGCCACAT TCCCCGCCTGCG CTAA CGC-GGCGGCGA TTTGCCGAATGGCCT TERM 3014 2307441 - 2307406 - H 86 -2.7 -5.67063 | gap 2 GCTATGAGAAAAAAA GCGCCAATCTGAGTTAT CAAA AAAAC-CAGATC-GCGC TGAAACGTTTCAAGA TERM 3015 2307554 - 2307576 + H 93 -6.2 -5.64421 | opp_overlap 2307554 AACAGACCCTCAATA GCTGACGCAT AAA AGGCTTCAGC TTTTTTCTTTCAGCT setB 2307723 - 2308904 + | proton efflux pump STM2208 2309634 - 2308969 - | putative inner membrane protein TERM 3016 2309177 - 2309197 + g 72 -2.6 -4.83615 | AAGGATAGCTTTGCA TATGTTTC CGTTT GTAACATA TTTTTATGCACGCTA STM2209 2309758 - 2309636 - | putative inner membrane protein STM2209.1c 2310400 - 2310146 - | hypothetical protein TERM 3017 2310475 - 2310457 - H 83 -4.6 -5.27335 | overlap 2310438 TTGTCCAAAGAAAAA TCCAGATT TAA AATGTGGA CGTCATCATGATCAG TERM 3018 2310921 - 2310895 - g 89 -13.8 -3.59247 | overlap 2310886 GAAGAACGTTTCAAA GGCGACGATATC GTT GATACCGTCACC CTGAGCCGTCGCGGC yeiP 2310724 - 2311296 + | elongation factor P TERM 3019 2311324 - 2311338 + F 82 -5.6 -5.10665 | overlap 2311308 2311323 TCGGCTGCGCCCCAG GGCGCA GTC TGCCCC TTTTATTTATTGACT yeiR 2311509 - 2312495 + | putative cobalamin biosynthetic protein yeiU 2312525 - 2313244 + | putative permease TERM 3020 2313297 - 2313258 - f 70 -8.8 -3.38088 | gap 1, opp_overlap 2313260, overlap 2313260 AACCTATGTAATTAA CATTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAATT TATGATGATATTCCC TERM 3021 2313295 - 2313260 - f 77 -11.4 -3.25652 | gap 1, opp_overlap 2313260, overlap 2313258 CCTATGTAATTAACA TTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAA TTTATGATGATATTC TERM 3022 2313260 - 2313295 + F 100 -13.6 -4.01853 | gap 1, opp_overlap 2313258 2313260 CCTATGTAATTAACA TTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAA TTTATGATGATATTC TERM 3023 2314206 - 2314192 - g 82 -5.6 -5.0538 | CCGTACTGGAAAAAA CGCTAC AAT GAAGCG CGTCGAGTTCTGAGC spr 2313658 - 2314230 + | putative outer membrane lipoprotein TERM 3024 2314277 - 2314304 + F 74 -11.4 -2.90804 | opp_overlap 2314282, overlap 2314282 CTGATGAGACGACAT AAAAAGCACTGC TTCA GCAGTGCTTTTG CTTATTATCCCTTCT TERM 3025 2314299 - 2314282 - f 100 -11.3 -5.02502 | opp_overlap 2314282 2314277 GAGACGACATAAAAA GCACTGC TTCA GCAGTGC TTTTGCTTATTATCC TERM 3026 2314282 - 2314299 + F 95 -11.3 -4.59414 | opp_overlap 2314282, overlap 2314277 GAGACGACATAAAAA GCACTGC TTCA GCAGTGC TTTTGCTTATTATCC TERM 3027 2314471 - 2314445 - f 74 -10.2 -3.22475 | overlap 2314443 2314446 GCTACTGCGACAATA CGCTTTCCTGCG CAT CACAGAAAAGCA TGACTATCCGGGGTA TERM 3028 2314470 - 2314446 - f 73 -11.5 -2.53271 | overlap 2314445 2314443 CTACTGCGACAATAC GCTTTCCTGCG CAT CACAGAAAAGC ATGACTATCCGGGGT rtn 2314556 - 2316112 + | hypothetical protein TERM 3029 2316302 - 2316288 - g 77 -8.6 -4.10552 | GCCCAGGAAATCAAA GAAAGC TAC GCTTTC GCCGTACTCGGCGAA yejA 2316219 - 2318024 + | putative ABC transporter periplasmic binding protein TERM 3030 2318721 - 2318749 + G 86 -10.9 -4.08767 | opp_overlap 2318719 TTGTGGCATATTACG CTGCCGGTGTTGG CGA CCGTCATCGGCGG TTTTGCCGCCCTGAC yejB 2318034 - 2319128 + | putative ABC-type dipeptide/oligopeptide/nickel transport system permease TERM 3031 2320109 - 2320129 + G 71 -8.1 -3.80573 | CTGCTGATTTTTATC GGCGAAGCG GTA CGCGACGCC TTTGATCCTGCTAAG yejE 2319128 - 2320153 + | putative ABC-type dipeptide/oligopeptide/nickel transport system permease component TERM 3032 2320511 - 2320494 - g 73 -5.5 -4.59109 | opp_overlap 2320484 CATACGCTGGAAAAA CAGCTCT ATGA AGTGCTG TCGCTCCATCGGGGA TERM 3033 2321148 - 2321131 - g 71 -4.8 -4.60487 | opp_overlap 2321131 2321147 CAGGATCGGGAAAAA GCACCA CCGGTC TGGCGC TGTTACGGCTTATCC yejF 2320155 - 2321744 + | putative ABC-type transport system ATPase component yejG 2322092 - 2321748 - | hypothetical protein bcr 2323673 - 2322483 - | bicyclomycin/multidrug efflux system TERM 3034 2323091 - 2323113 + g 75 -11.2 -3.44848 | opp_overlap 2323088 2323089, overlap 2323089 GAATATGAAAAGGCT GACGCCGCTC AAC GGGCAGCGTC TCTTTAATCAGAGCA rsuA 2324396 - 2323701 - | 16S rRNA pseudouridylate synthase A TERM 3035 2324444 - 2324428 - H 72 -8.7 -3.81258 | GTAATAATACGGAAA TCGGGCA TTC TACCCGA AAAAAGGGAATTGCT yejH 2324548 - 2326308 + | putative ATP-dependent helicase rplY 2326433 - 2326717 + | 50S ribosomal protein L25 TERM 3036 2326732 - 2326763 + T 78 -12.4 -2.71246 | opp_overlap 2326740, overlap 2326740 ATCGCCTGGAAGTTG AAGAAAAACCCCGC CCCG GCGGGGTTTTTTTA TGCGTTTAATTGAAT TERM 3037 2326740 - 2326755 + T 100 -11.8 -5.68039 | opp_overlap 2326740, overlap 2326732 GAAGTTGAAGAAAAA CCCCGC CCCG GCGGGG TTTTTTTATGCGTTT TERM 3038 2326755 - 2326740 - T 100 -11.8 -5.10208 | opp_overlap 2326740 2326732 GAAGTTGAAGAAAAA CCCCGC CCCG GCGGGG TTTTTTTATGCGTTT STM2225 2327446 - 2326826 - | putative inner membrane protein TERM 3039 2327384 - 2327369 - G 72 -4 -4.8083 | gap 1 CAACATCATCAAAAA TGCG-AC AAT GTGCGCA TACAAAACCTGCCGA yejK 2328481 - 2327474 - | nucleoid-associated protein NdpA yejL 2328661 - 2328888 + | hypothetical protein TERM 3040 2329417 - 2329396 - g 70 -6.5 -4.09864 | gap 1 ATGGAGTTGGCAAAA GCTGCGCAGT CTC AC-GCGCCGC CGCCATTTCGCAAGG TERM 3041 2329423 - 2329444 + G 70 -5.1 -4.50988 | overlap 2329425 2329428 2329432 CACGCGCCGCCGCCA TTTCGCAAG GCCG CTTGCGGCA TTCTTTTTCGTCTCC TERM 3042 2329428 - 2329447 + G 72 -2 -4.85177 | overlap 2329425 2329423 2329432 GCCGCCGCCATTTCG CAAGGCCG CTTG CGGCATTC TTTTTCGTCTCCTTT yejM 2328920 - 2330680 + | putative hydrolase TERM 3043 2330846 - 2330863 + T 100 -8.4 -5.65177 | opp_overlap 2330846 AAATTCCTCGAAGAA CCAGCC TGTTAC GGCTGG TTTTTTTATGCCTGT TERM 3044 2330924 - 2330908 - T 72 -9.4 -3.65581 | AGCAACGGGGAATAA TCGGGG AAAAA CCCCGA CACAAAACATCGACT STM2230.1c 2331431 - 2330961 - | DNA polymerase V subunit STM2231 2331492 - 2331782 + | virulence protein TERM 3045 2331795 - 2331830 + F 74 -5.4 -4.70319 | gap 1, opp_overlap 2331795 TAAAGTTTTTCAATA TCCGCCATAGTTACGTT TTG ATCGCG-CTGTGGCGGA TTTTCATTTTCGTAA TERM 3046 2331995 - 2332005 + F 71 -6.8 -4.0648 | opp_overlap 2331980 2331977 CCAGCAAGATGCGCT GGTC AGT GACC TTCTTTGATGTAGTT TERM 3047 2332523 - 2332558 + G 74 -3.2 -4.95843 | TCAGAGTTCAACTTT TTGCTTCACACCTGGT CACT ATCAGTTGAGTGGCAA TTTTATATTTTATAT TERM 3048 2333332 - 2333343 + G 77 -4.4 -4.84311 | opp_overlap 2333332 ATGTCAGGATAAAAT GACT GAAA AGTC TTTTGTTGTATGGGG oafA 2332130 - 2333959 + | O-antigen acetylase TERM 3049 2333998 - 2333944 - T 100 -11.1 -4.7629 | gap 1, opp_overlap 2333957 2333963, overlap 2333949 2333957 TGAGGAAGTGAAAAA GCAGATTT-CAAAATAAACAGAGGGG CTTG CCCCTCTTTTTATTTTATAAAACTAC AACAATAATGCAAAT TERM 3050 2333992 - 2333949 - T 79 -12 -3.19705 | opp_overlap 2333957 2333963, overlap 2333944 2333957 AAGTGAAAAAGCAGA TTTCAAAATAAACAGAGGGG CTTG CCCCTCTTTTTATTTTATAA AACTACAACAATAAT TERM 3051 2333984 - 2333957 - T 89 -11.4 -4.18058 | opp_overlap 2333957 2333963, overlap 2333949 2333944 AAGCAGATTTCAAAA TAAACAGAGGGG CTTG CCCCTCTTTTTA TTTTATAAAACTACA TERM 3052 2333957 - 2333984 + T 95 -11.4 -4.38712 | opp_overlap 2333949 2333944 2333957, overlap 2333963 AAGCAGATTTCAAAA TAAACAGAGGGG CTTG CCCCTCTTTTTA TTTTATAAAACTACA TERM 3053 2333963 - 2333978 + T 100 -10.4 -5.54907 | opp_overlap 2333957 2333949 2333944, overlap 2333957 ATTTCAAAATAAACA GAGGGG CTTG CCCCTC TTTTTATTTTATAAA STM2233 2334456 - 2334013 - | putative cytoplasmic protein STM2234 2335361 - 2334834 - | putative phage tail fiber assembly protein STM2235 2336605 - 2335364 - | hypothetical protein TERM 3054 2336329 - 2336351 + g 90 -4.8 -5.40072 | GAAACAGCGGCTTAT TCGGGATGTC CGC GCCATTCTGA TTTTTTTCAAGACGG STM2236 2337184 - 2336666 - | hypothetical protein STM2237 2337527 - 2337198 - | putative inner membrane protein TERM 3055 2337697 - 2337682 - H 82 -7.5 -4.64846 | opp_overlap 2337682 CCAGAAACGACAAAA CCCGC TCGACG GCGGG TTTAAGCTGCGTGGC TERM 3056 2337781 - 2337791 + H 75 -3.2 -5.21709 | TTTTAATCCCAAAGT CGTA TTA TGCG TTTTTTACTGTAGGA STM2238 2337824 - 2339155 + | hypothetical protein TERM 3057 2339183 - 2339157 - T 100 -15.3 -3.767 | opp_overlap 2339160, overlap 2339160 CATTCATCCAGTAAA TAATACGCCCC TGCAT GGGGCGTATTA TTAAACGTCCATATC TERM 3058 2339180 - 2339160 - T 95 -12.6 -4.015 | opp_overlap 2339160, overlap 2339157 TCATCCAGTAAATAA TACGCCCC TGCAT GGGGCGTA TTATTAAACGTCCAT TERM 3059 2339160 - 2339180 + T 88 -12.6 -3.63694 | opp_overlap 2339157 2339160 TCATCCAGTAAATAA TACGCCCC TGCAT GGGGCGTA TTATTAAACGTCCAT STM2239 2339552 - 2339184 - | putative phage antiterminator STM2240 2340556 - 2339567 - | putative cytoplasmic protein TERM 3060 2340483 - 2340462 - G 70 -10.1 -3.32946 | opp_overlap 2340462, overlap 2340460 2340463 GGTTCAAGCAGAACA CGCCCCTGC ATAA ACAGGGGCA TCAGTTCCGATCCCG sspH2 2343251 - 2340885 - | leucine-rich repeat-containing protein TERM 3061 2342831 - 2342865 + g 71 -10.6 -3.28866 | overlap 2342830 2342828 2342832 CCGCGTGTCCTGTGC CCTCCTCACCCTGTGC TGT GTCCAGGGTGAGGCGA TGTGTTTCACTGTAC TERM 3062 2342832 - 2342864 + g 81 -14.1 -2.56838 | overlap 2342831 2342830 2342828 CGCGTGTCCTGTGCC CTCCTCACCCTGTGC TGT GTCCAGGGTGAGGCG ATGTGTTTCACTGTA STM2242 2343623 - 2343420 - | putative phage tail fiber protein TERM 3063 2343789 - 2343777 - R 73 -10.5 -3.10344 | opp_overlap 2343775 CTCTGATTTAAGATA CGCCG CAT CGGCG AATAATGTGTCATCT STM2243 2344711 - 2343920 - | putative tail fiber protein of phage TERM 3064 2344477 - 2344493 + g 73 -5.8 -4.38927 | opp_overlap 2344474, overlap 2344478 2344483 GCGCGGCAATCAGTT TGCGGA CAAAC TCCGCG TTTGTTGTCTGAAGC TERM 3065 2344853 - 2344865 + H 71 -10.5 -2.64354 | overlap 2344855 2344863 CGATGCTGATGACTA GGCGG CTG CCGCC GTTCTGGCTGTGTCA TERM 3066 2344887 - 2344912 + H 72 -5.9 -4.4648 | GCTGTGTCAGCCGAC GCCGCGCTGGC TGAT GCCTCCCCGGC TTTTGTGGTCGCCGT TERM 3067 2345006 - 2344989 - H 76 -8.4 -4.08064 | opp_overlap 2344989 AATTCCCCTTGAAAA CCAGCC TGTCAG GGCTGG TTTTTTTATGCCTAC TERM 3068 2344989 - 2345006 + H 100 -9.1 -5.64274 | opp_overlap 2344989 AATTCCCCTTGAAAA CCAGCCT GTCA GGGCTGG TTTTTTTATGCCTAC STM2244 2345014 - 2345217 + | virulence protein STM2245 2345972 - 2345409 - | putative outer membrane protein TERM 3069 2346572 - 2346582 + H 74 -6.8 -4.3534 | TCAGCTAATTACTCG CCTG TCA CAGG TTTTACTACTTACCC narP 2346702 - 2347349 + | transcriptional regulator NarP TERM 3070 2347347 - 2347392 + T 83 -9.5 -4.11183 | gap 1, opp_overlap 2347353 2347357, overlap 2347349 2347350 ACACGCGGAATGCAG TAACAAGCCAGGCCCGGTGGCG CCG CGCCACCGGGCC-GTCAGGGTC TTATTTCTCCTGCGC TERM 3071 2347349 - 2347390 + T 86 -12.1 -3.64882 | gap 1, opp_overlap 2347353 2347357, overlap 2347347 2347350 ACGCGGAATGCAGTA ACAAGCCAGGCCCGGTGGCG CCG CGCCACCGGGCC-GTCAGGG TCTTATTTCTCCTGC TERM 3072 2347350 - 2347389 + T 93 -15.6 -2.78206 | gap 1, opp_overlap 2347353 2347357, overlap 2347349 2347347 CGCGGAATGCAGTAA CAAGCCAGGCCCGGTGGCG CCG CGCCACCGGGCC-GTCAGG GTCTTATTTCTCCTG TERM 3073 2347386 - 2347353 - T 100 -20.3 -3.75105 | gap 1, opp_overlap 2347350 2347349 2347347, overlap 2347357 GGAATGCAGTAACAA GCCAGGCCCGGTGGCG CCG CGCCACCGGGCC-GTC AGGGTCTTATTTCTC TERM 3074 2347383 - 2347357 - T 100 -25.2 -2.67428 | opp_overlap 2347350 2347349 2347347, overlap 2347353 TGCAGTAACAAGCCA GGCCCGGTGGCG CCG CGCCACCGGGCC GTCAGGGTCTTATTT ccmH 2348436 - 2347393 - | putative heme lyase subunit TERM 3075 2347650 - 2347660 + g 87 -8.2 -4.62069 | CCGCGTAGCCCAGCG CCGC ATC GCGG TTTTTCGGGTCCAGA ccmG 2348990 - 2348433 - | heme lyase/disulfide oxidoreductase ccmF 2350918 - 2348987 - | cytochrome c-type biogenesis protein ccmE 2351394 - 2350915 - | cytochrome c-type biogenesis protein CcmE ccmD 2351603 - 2351391 - | heme exporter protein C TERM 3076 2351561 - 2351550 - G 100 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TACC CGCC CATGGCGAAAAAATC TERM 3077 2351585 - 2351575 - G 76 -3.2 -5.03314 | CCCATGGCGAAAAAA TCGC TCC ACGA TGAAAATGCCGGACT ccmC 2352337 - 2351600 - | heme exporter protein TERM 3078 2352238 - 2352218 - G 83 -10.3 -4.05788 | CGGGGCGAAACCAAA GCCCCGGAC CCA GCCCGTGGC CAGCACAATGATGCC ccmB 2353048 - 2352389 - | heme exporter protein ccmA 2353662 - 2353045 - | cytochrome c biogenesis protein CcmA TERM 3079 2353388 - 2353403 + g 71 -6 -4.25283 | opp_overlap 2353375, overlap 2353355 AAGTGCAGGTTCTCC CGCGCC GTCA GGCGGG TTTTGATCCCCGGCT TERM 3080 2353499 - 2353541 + g 75 -6 -4.56775 | opp_overlap 2353491 CAGTACACCTCCCCG CCGTCCGGGCGCGCCAGC CCGGTCA GCAGGCGCAGCAGGGTGG TTTTTCCGGCGCCGT napC 2354285 - 2353683 - | cytochrome c-type protein NapC napB 2354744 - 2354295 - | diheme cytochrome c550 TERM 3081 2354400 - 2354386 - G 70 -7 -4.09117 | TGCAGGCAGAAATAA CGACGC GGC GCGACG TTGCCCGACACTTTA napH 2355729 - 2354860 - | quinol dehydrogenase membrane component TERM 3082 2355605 - 2355592 - G 73 -5.9 -4.43272 | ATGCAAAACCCAAAA GCCCA GCCA CGGGC CGCTGAGAAACATCC napG 2356411 - 2355716 - | quinol dehydrogenase periplasmic component TERM 3083 2356277 - 2356299 + g 83 -10.4 -3.92324 | GCCAGGCGGACGCAG CCGCACGCCC GAT GCGCGCGCGG TTTGCTGTTGCAAGC napA 2358904 - 2356418 - | nitrate reductase TERM 3084 2357284 - 2357308 + g 71 -7.2 -4.06419 | gap 2, overlap 2357282 GCCAGAACTGCGTGC GGCG-TT-CGGC GTT GCCGTAAGCGCC TTCTTTCTCAACCCA napD 2359164 - 2358901 - | assembly protein for periplasmic nitrate reductase napF 2359645 - 2359154 - | ferredoxin-type protein eco 2360059 - 2360553 + | ecotin precursor yojI 2362405 - 2360762 - | multidrug transporter membrane component/ATP-binding component TERM 3085 2361028 - 2361038 + g 93 -4.6 -5.49809 | CCAGCGCCAGCAGCA GTGC AAT GCGC TTTTTTTGCCCTTTC TERM 3086 2361362 - 2361350 - G 74 -3.3 -4.8622 | overlap 2361352 GCCGCCAATTAAAAA CAGCA GTT CGCCG CGGTGAATCGTCAGG TERM 3087 2362264 - 2362278 + g 79 -11.4 -3.64822 | overlap 2362249 CCGGCAGCACCATGA CGGTGG TGT CCACCG TTTCAATCAGGCGCT alkB 2363131 - 2362481 - | DNA repair system protein ada 2364195 - 2363134 - | O6-methylguanine-DNA methyltransferase/transcription activator/repressor TERM 3088 2363877 - 2363839 - G 74 -10.3 -3.53012 | GGTGCTCGCTTTAAA CAGACGGTGCAGATGAA ACGGG CTCATCGCCACCGCCTG CGCCAGAAACGCCAG TERM 3089 2364061 - 2364037 - G 74 -2.1 -5.00616 | overlap 2364055 CGCGTTGGCAAAAAA GCGAACATT TTTACGT AACGCCCGC TTCGAGCGACAAGAA TERM 3090 2364109 - 2364090 - G 74 -2.1 -5.07053 | gap 1, overlap 2364080 2364091 2364092 AAGGACGGCAAAAAA CGCCGGTG GTTCG CACCG-CA AAAACGAAACGCCCA apbE 2365328 - 2364276 - | thiamine biosynthesis lipoprotein ApbE TERM 3091 2364861 - 2364845 - G 71 -10.9 -3.28924 | opp_overlap 2364844 2364843 CAGCCCTGTCGATAA CCTGCAA ATG TTGCAGG CCTGTTTTCGCTTTT TERM 3092 2365421 - 2365408 - R 100 -9.5 -5.18357 | opp_overlap 2365408 TAAGGCATGAAAAAA GGGCC CGCA GGCCC TTTAGCAACATCTTT TERM 3093 2365408 - 2365421 + r 75 -9.5 -3.55815 | opp_overlap 2365408 TAAGGCATGAAAAAA GGGCC CGCA GGCCC TTTAGCAACATCTTT ompC 2366579 - 2365443 - | outer membrane porin protein C TERM 3094 2366979 - 2366997 + H 100 -11 -5.82388 | TTACCCCTATTTCAA CCGGATGC TTC GCATTCGG TTTTTTTTACCCTTT TERM 3095 2367354 - 2367369 + G 71 -4.6 -4.58786 | GATTCTCCCTTCTAC CGGGAA GCAT TACCCG TTTCTTCTTATTGCT yojN 2367308 - 2369977 + | phosphotransfer intermediate protein in two-component regulatory system with RcsBC TERM 3096 2370290 - 2370263 - g 74 -9.8 -3.75024 | opp_overlap 2370261 2370266 2370268, overlap 2370266 TCTGACCATGAACAA CAACCCGGCGAT CCTG AGCGCCGTGTTG GATCTTGATATTGAA rcsB 2369994 - 2370644 + | transcriptional regulator RcsB TERM 3097 2370714 - 2370742 + T 85 -6.6 -5.24129 | gap 1, overlap 2370715 GACTCATCTTTTACA GGCCGGACAGGCG ACGC CGCCA-TCCGGCA TTTTTTATGCCCGCG TERM 3098 2370715 - 2370741 + T 79 -10.1 -3.73995 | gap 1, overlap 2370714 ACTCATCTTTTACAG GCCGGACAGGCG ACGC CGCCA-TCCGGC ATTTTTTATGCCCGC rcsC 2373593 - 2370747 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 3099 2373694 - 2373677 - R 100 -14.1 -5.29846 | AACGGCAAAGAAAAA GGGCCGG ATAT CCGGCCC TCGCACAGCAATAAC gyrA 2376347 - 2373711 - | DNA gyrase subunit A TERM 3100 2375289 - 2375251 - G 71 -7.4 -3.92746 | gap 1 CGCAGTTCAAAAATA GTCCGACGCGTCACCAC TTCACG GCGGTGGCGCA-CGAAC GCTGAAATGATATCT STM2273 2377959 - 2376757 - | putative dehydratase STM2274 2379299 - 2377974 - | putative permease TERM 3101 2379970 - 2379985 + G 72 -2.6 -4.8667 | TACCTCAAACTGGAT CATGAT TTTC ATTATG TTTTTGTGAAATATG TERM 3102 2380150 - 2380140 - g 76 -3.2 -5.07567 | opp_overlap 2380143 2380146, overlap 2380146 GGATATGTTAAAAAA CAAC AAC GTCG AGGGCGTCTGTAATT TERM 3103 2380223 - 2380201 - g 74 -10.6 -3.48395 | overlap 2380202 2380213 2380214 AGCGGTTTTACAGAA CGCGCAAGAA AAC TTCTTGCGCT GAAAGCGTAATAAAG TERM 3104 2380222 - 2380202 - g 81 -14.1 -2.68823 | overlap 2380201 2380213 2380214 GCGGTTTTACAGAAC GCGCAAGAA AAC TTCTTGCGC TGAAAGCGTAATAAA STM2275 2379538 - 2380233 + | putative regulatory protein ubiG 2380316 - 2381044 + | 3-demethylubiquinone-9 3-methyltransferase TERM 3105 2381067 - 2381093 + F 83 -9.4 -4.21607 | opp_overlap 2381067, overlap 2381058 GAATTTTCCTATAAG GGTTGCGTTAGA TCA TCGGGCGCAACC TTTCTCTTCGATGAA TERM 3106 2381124 - 2381134 + F 100 -4 -6.24157 | GAAATCAGCATTCGA TCAA ATT TTGA TTTTTTTTTATGAAT TERM 3107 2383135 - 2383125 - g 70 -6.8 -4.20084 | ACCACCTATGCAAAA GGCA TTT TGCC GATCGACACCTACAA nrdA 2381400 - 2383685 + | ribonucleotide-diphosphate reductase subunit alpha nrdB 2383798 - 2384928 + | ribonucleotide-diphosphate reductase subunit beta TERM 3108 2385158 - 2385133 - g 93 -16.3 -2.87931 | TCCAGCCGGGAGAGA TTTTGCCCTGC TGCT GCAGGGCAAAA GGCGATATCGAAATC yfaE 2384928 - 2385182 + | 2Fe-2S ferredoxin YfaE STM2280 2386374 - 2385184 - | putative permease STM2281 2386536 - 2387414 + | putative transcriptional regulator TERM 3109 2387515 - 2387463 - T 72 -9 -3.54543 | opp_overlap 2387471 ACTTACGCTGGCAAA CGTTGCGCCAGGCCGGATGAGG CGTTTATGC CCTCATCCGGCGCGTCACTTCG ACTATGGCAAACCTT glpQ 2388600 - 2387530 - | glycerophosphodiester phosphodiesterase TERM 3110 2388381 - 2388400 + g 100 -13.6 -3.97947 | opp_overlap 2388370 GGTAGTGGTCATGGA GGACGACC AGAT GGTCGTCC TTTGTCATCACTAAA glpT 2389963 - 2388605 - | sn-glycerol-3-phosphate transporter TERM 3111 2388810 - 2388826 + g 77 -3.5 -5.00616 | opp_overlap 2388796 2388806, overlap 2388812 AGACCGGTAAAGCCC GCCGCCG TAC CCGCCGC TTTTTTCGGCGCCAG TERM 3112 2389699 - 2389684 - G 78 -6 -4.82901 | opp_overlap 2389697 CTGCCGGCAGAAAAA CGCGCG GATT CGAGCG ATCGGACACCGAACC TERM 3113 2390257 - 2390243 - g 74 -4.2 -4.70739 | overlap 2390234 2390244 GAAAAACAATGAAAA CTCGCG ACT CGCAAA CAAGTGACGTGATTA TERM 3114 2390313 - 2390327 + G 70 -9.2 -3.7456 | opp_overlap 2390291 AGGGATCGCCCGCGA CTGCGC GCT GCGCGG TTTACGTGTCATTCT TERM 3115 2390675 - 2390662 - g 77 -8.1 -4.07687 | ATCGGTGCGGTAAAA GTGCC GGAT GGCAC CGTGGACCCTTTCCG glpA 2390236 - 2391864 + | sn-glycerol-3-phosphate dehydrogenase subunit A glpB 2391854 - 2393113 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 2393110 - 2394300 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 3116 2394328 - 2394308 - f 100 -18.3 -4.8622 | TCGGCTAAGTAAAAA GCGCCGGAG CCC CTCCGGCGC CATTACCCTACTCAC TERM 3117 2394633 - 2394618 - f 78 -4.7 -5.00467 | opp_overlap 2394618 TGAATAATAAGAAAA TCAGG TCTATG CCTGA TTTAATATATCCCCC sseL 2394795 - 2395748 + | deubiquitinase TERM 3118 2395851 - 2395825 - T 79 -10.8 -3.62644 | opp_overlap 2395822 2395821, overlap 2395826 TTTATAAGTATATAA GGGTGGGAAGGC CAG GCCTTCCCACTA AAAGTTCTATGCCGT TERM 3119 2395850 - 2395826 - T 87 -14.3 -2.77104 | opp_overlap 2395822 2395821, overlap 2395825 TTATAAGTATATAAG GGTGGGAAGGC CAG GCCTTCCCACT AAAAGTTCTATGCCG STM2288 2396034 - 2395858 - | putative cytoplasmic protein TERM 3120 2396021 - 2396003 - G 70 -6.7 -4.10657 | CGATAGGCGCTAAAA CGCATGC GTAAG GCATACG TGCCATCCGGCATTT TERM 3121 2396022 - 2396033 + g 83 -5.8 -4.88067 | TGCGTAAGGCATACG TGCC ATCC GGCA TTTTTCTCAATAACT STM2289 2396843 - 2396040 - | putative aldolase TERM 3122 2396225 - 2396203 - G 91 -7.6 -5.03314 | overlap 2396204 2396205 TCGACCGCCAAAAAA CCCGCCGC TTTTCCG GCGGCGCG AATACGATAAATACA TERM 3123 2396221 - 2396204 - G 71 -9.8 -3.61506 | overlap 2396203 2396205 CGACCGCCAAAAAAC CCGCCG CTTTTC CGGCGG CGCGAATACGATAAA yfaV 2398158 - 2396869 - | putative transport protein yfaW 2399431 - 2398214 - | putative galactonate dehydratase yfaX 2400215 - 2399433 - | putative transcriptional regulator STM2293 2401661 - 2400465 - | competence damage-inducible protein A TERM 3124 2400869 - 2400900 + g 74 -7.2 -4.21275 | gap 1, opp_overlap 2400861, overlap 2400894 GACTCAACTGCCTTT CCTGCAGGCGGCGGG CTA TTTGC-GCCGGCAGG TTTTCCGTACCTTCA TERM 3125 2401768 - 2401749 - R 78 -12.8 -2.51702 | overlap 2401748 2401746 GAACAGGAGGAATAT GGCGCGAC GATT GCCGCGCC GTTAGCATCAAAAGC TERM 3126 2401799 - 2401782 - R 83 -9.1 -4.30576 | opp_overlap 2401768 CCGTTAGCATCAAAA GCTGGCG TTTA CGCCAAC ATAAGGGCCGTCAGC yfaZ 2402423 - 2401776 - | putative inner membrane protein TERM 3127 2402517 - 2402507 - H 91 -6.8 -5.61689 | opp_overlap 2402507 AAAATTAACAAAAAA CGCA GTC TGCG TTATCGCTTCCATTT yfaO 2402597 - 2403022 + | putative NTP pyrophosphohydrolase TERM 3128 2403027 - 2403046 + T 76 -9.3 -3.76413 | opp_overlap 2403026 2403023 GGTTATTATAATGAC GACAGCC GCTTCA GGCTGTC TTTACGCTTTTAACA ais 2403672 - 2403067 - | aluminum-inducible protein TERM 3129 2403742 - 2403730 - H 76 -7.7 -4.27965 | overlap 2403725 ACAATTAAAATGAAA TTCCG CAA CGGAA GACCAGGCCAGAAAC TERM 3130 2404481 - 2404463 - g 83 -10.2 -3.95153 | opp_overlap 2404473 2404479, overlap 2404455 GGAACCAGCTACAAA GGTCGCCA CAT TGGCGCCC GGGGCACCGCGATTT yfbE 2403971 - 2405110 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase pmrF 2405113 - 2406096 + | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase yfbG 2406093 - 2408075 + | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase STM2300 2408072 - 2408971 + | putative cytoplasmic protein TERM 3131 2409164 - 2409154 - g 71 -4.6 -4.59773 | CGTTATTTTGAAAAA CCGA TAG CCGG TTACTGGATAAACAG arnT 2408968 - 2410614 + | 4-amino-4-deoxy-L-arabinose transferase STM2302 2410611 - 2410946 + | putative inner membrane protein STM2303 2410946 - 2411323 + | hypothetical protein pmrD 2411575 - 2411318 - | polymyxin resistance protein B menE 2413040 - 2411673 - | O-succinylbenzoic acid--CoA ligase menC 2413999 - 2413037 - | O-succinylbenzoate synthase TERM 3132 2413418 - 2413397 - G 77 -11.5 -3.57144 | opp_overlap 2413389 2413399 GGTTTCACGGGCAAA GGCGCGGGA ATCA TCCCGCGTC TTACACGGTTCTTCG TERM 3133 2413399 - 2413416 + g 81 -12.7 -3.05066 | opp_overlap 2413397, overlap 2413389 TTTCACGGGCAAAGG CGCGGGA ATCA TCCCGCG TCTTACACGGTTCTT menB 2414856 - 2413999 - | naphthoate synthase yfbB 2415629 - 2414871 - | acyl-CoA thioester hydrolase YfbB menD 2417296 - 2415626 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 3134 2416616 - 2416636 + g 76 -5.3 -4.82901 | overlap 2416618 2416620 TTCCGCGCTCATACG CCCGGCG ACGACAA CGCCGCG TTTTTGTCGCCAGAA menF 2418677 - 2417382 - | menaquinone-specific isochorismate synthase TERM 3135 2417646 - 2417620 - G 71 -5.8 -4.30995 | gap 1 TGTTCTATAAAACAA CGCGCGGGTTC ACGAGG GATCCCG-GCG ACCGCTGCGGTAGGC TERM 3136 2417819 - 2417838 + g 74 -2.1 -5.00846 | opp_overlap 2417819 AGATGTCTTCGACAA CCAGC ATATTTTCTC GCTGG TTTTTATCGTCTTTC TERM 3137 2418715 - 2418699 - R 78 -6.5 -4.56597 | opp_overlap 2418711 2418712 2418714, overlap 2418700 2418711 CCTCCCTGTTAAAAA CCCCACA TTA TACGGGG TACTGCCCTAAAAAA elaB 2419089 - 2418778 - | hypothetical protein TERM 3138 2418836 - 2418846 + g 81 -6.8 -4.72986 | opp_overlap 2418836 GCGCCTACGCCAATA CCCT GCC AGGG TTTTTCATGAACGTA elaA 2419599 - 2419138 - | hypothetical protein TERM 3139 2419256 - 2419235 - G 72 -2.1 -4.84017 | AACCGCGCATAAAAA GGTTGCAGA TGCG CCTGCGCCC CCAGATATAGCGGCT elaC 2419660 - 2420577 + | ribonuclease Z STM2314 2420643 - 2421644 + | putative chemotaxis signal transduction protein TERM 3140 2421646 - 2421684 + T 77 -11 -3.14132 | opp_overlap 2421650 2421652 GCAAAAGCGCCTGAC GTAACAGGGGATGCCT ACAGTAC AGGCATCCCCTGACGC TTAGTGAGACAAGCC TERM 3141 2421680 - 2421650 - T 100 -18.4 -3.05715 | opp_overlap 2421646, overlap 2421652 AAGCGCCTGACGTAA CAGGGGATGCCTAC AGT ACAGGCATCCCCTG ACGCTTAGTGAGACA TERM 3142 2421678 - 2421652 - T 93 -15.2 -3.08679 | opp_overlap 2421646, overlap 2421650 GCGCCTGACGTAACA GGGGATGCCTAC AGT ACAGGCATCCCC TGACGCTTAGTGAGA yfbK 2423466 - 2421685 - | hypothetical protein TERM 3143 2424278 - 2424262 - R 73 -9.5 -3.29829 | opp_overlap 2424261 2424262, overlap 2424273 CACAGGTTTTCATAA GTTGGAT GCA ATCCAAC ATTTAGAGGCTCAGG TERM 3144 2424313 - 2424330 + r 93 -12.7 -3.66018 | GCTCATCAGCCTCAA CCGCCGA TAAA TCGGCGG TTATTGACATCATCA nuoN 2425811 - 2424354 - | NADH dehydrogenase subunit N TERM 3145 2425575 - 2425545 - G 83 -11.8 -3.65351 | CCACGGGTAGGCAAA GGTACAGGTGGCGA GGC TCGCCAGCAGCACC AGTCCGGTGTAGAGC nuoM 2427347 - 2425818 - | NADH dehydrogenase subunit M TERM 3146 2427139 - 2427127 - G 70 -6.9 -4.18802 | ATAGAGATGCCAAAA CGCGG GAT CCACG GCAGGACAAATTCAG nuoL 2429502 - 2427661 - | NADH dehydrogenase subunit L nuoK 2429801 - 2429499 - | NADH dehydrogenase subunit K nuoJ 2430352 - 2429798 - | NADH dehydrogenase subunit J nuoI 2430905 - 2430363 - | NADH dehydrogenase subunit I nuoH 2431897 - 2430920 - | NADH dehydrogenase subunit H TERM 3147 2431749 - 2431710 - G 76 -12.8 -2.79679 | gap 1, opp_overlap 2431711 AACATCTTGATCATA TCCGCGACCAGCTGGAGCG AGC CGCCCCAGCCAA-CGCGGT TTGGTCCATAACGGT nuoG 2434620 - 2431894 - | NADH dehydrogenase subunit G TERM 3148 2433119 - 2433135 + g 74 -2.1 -5.00616 | CTACCGGCGTTAGTG CCGGAGA TAA TCAGCGG TTTTTTCGCGCCGGC TERM 3149 2434442 - 2434456 + g 70 -5.6 -4.46404 | ATCACCAGGCGACCA CGCGTA TCT TCCGCG TTTTGGTATTGCTTC nuoF 2435988 - 2434651 - | NADH dehydrogenase I subunit F nuoE 2436485 - 2435985 - | NADH dehydrogenase subunit E nuoC 2438290 - 2436488 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 3150 2438010 - 2437999 - G 73 -5.8 -4.37886 | overlap 2438007 2438008 TCAGGTGGTAGAAAA CGGA AAAA TCCG CGGCGGGTAACCCGT TERM 3151 2438031 - 2438007 - G 100 -9.1 -4.89729 | overlap 2437999 2438008 TAGAAAACGGAAAAA TCCGCGGCGGG TAA CCCGTCACGGT GCGTACGCAGGCGTT TERM 3152 2438030 - 2438008 - G 85 -12.6 -3.5221 | overlap 2437999 2438007 AGAAAACGGAAAAAT CCGCGGCGGG TAA CCCGTCACGG TGCGTACGCAGGCGT nuoB 2439039 - 2438377 - | NADH dehydrogenase subunit B TERM 3153 2438953 - 2438976 + g 95 -11 -4.57073 | overlap 2438943 GTTAACTTCCTGCTC CAGGGGGTCG GTTA CGATCTCCTG TTTTTGCAGGGGGTA nuoA 2439498 - 2439055 - | NADH dehydrogenase subunit A TERM 3154 2439200 - 2439186 - G 89 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCAACCCAGCCGC TERM 3155 2439603 - 2439585 - R 95 -2.4 -6.13503 | overlap 2439586 2439587 GAGGAATAAAAAAAA CCCTACAA TTA CTGTAGAA AATGATAAAAACAGC STM2329 2440045 - 2439893 - | putative cytoplasmic protein TERM 3156 2440086 - 2440053 - R 100 -9.6 -5.61596 | gap 1, opp_overlap 2440053 ATGGGCACAAAAAAA GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC TTTTTTACATTTACG TERM 3157 2440053 - 2440086 + r 91 -7.4 -5.22039 | gap 1, opp_overlap 2440053 ATGGGCACAAAAAAA GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC TTTTTTACATTTACG lrhA 2441063 - 2440125 - | NADH dehydrogenase transcriptional repressor TERM 3158 2440984 - 2440961 - G 71 -11.6 -2.96395 | opp_overlap 2440961 ACTGAGTACGACATA CCGCCGCCGC CGCC GCGGCGAAGG TGTTCAGATCGGCAA yfbQ 2441995 - 2443209 + | aminotransferase AlaT TERM 3159 2443240 - 2443217 - f 100 -14 -3.72453 | opp_overlap 2443210 2443217, overlap 2443210 ATCAATAATCTTAAA TTCAGGCTAC TTCG GTAGCCTGAA TTGCATCTTCATCTC TERM 3160 2443217 - 2443240 + F 86 -14 -3.21062 | opp_overlap 2443217 2443210, overlap 2443210 ATCAATAATCTTAAA TTCAGGCTAC TTCG GTAGCCTGAA TTGCATCTTCATCTC TERM 3161 2443619 - 2443598 - g 80 -4.3 -5.10497 | opp_overlap 2443602, overlap 2443585 AAGCGATCGAAAAAA TCGCCCAGC AAAA GCTGGTTGA TATGGCGCCGGATGA STM2332 2443303 - 2443902 + | hypothetical protein TERM 3162 2443951 - 2443978 + T 93 -10.6 -4.39166 | gap 1 ACCGTTCTTCCCGTA GGCCTGATAAGCG TAG CGCC-ATCAGGCC TTTTCCTGTCTGGGG yfbS 2445820 - 2443994 - | putative response regulator TERM 3163 2444159 - 2444144 - G 86 -11.8 -3.86194 | overlap 2444131 AACCGGCGTCATAAA GGCGGC GGAT GCCGCC ATCGCCACCGCCATC TERM 3164 2444735 - 2444749 + g 77 -11.4 -3.53012 | CAGCGATCCTTCCAG CGCGAC GCC GTCGCG TTTCAGGCCGACCAC TERM 3165 2445207 - 2445217 + g 77 -8.2 -4.13767 | overlap 2445182 CCGGCCTGTTGTCCG GGCG CAT CGCC TTTTAGCATGAAGCG TERM 3166 2445890 - 2445866 - R 84 -10.8 -3.86346 | gap 1, opp_overlap 2445867, overlap 2445869 CGATTCTGCCATAAA TAT-GCCCCGC CAAA GCGGGGCGATA TCATGATCAGGTCTT TERM 3167 2445886 - 2445869 - R 83 -14.1 -2.70946 | opp_overlap 2445867, overlap 2445866 TTCTGCCATAAATAT GCCCCGC CAAA GCGGGGC GATATCATGATCAGG yfbT 2446556 - 2445897 - | putative phosphatase yfbU 2447061 - 2446567 - | hypothetical protein TERM 3168 2447118 - 2447099 - R 100 -10.8 -5.52384 | opp_overlap 2447099 TGGCGATGAAAAAAA GAAGGCAT TGGT ATGCCTTC TTTTATATGCGTAAT TERM 3169 2447099 - 2447118 + r 93 -10.8 -4.55689 | opp_overlap 2447099 TGGCGATGAAAAAAA GAAGGCAT TGGT ATGCCTTC TTTTATATGCGTAAT STM2336 2447599 - 2447144 - | hypothetical protein TERM 3170 2447465 - 2447486 + g 80 -8.7 -4.07568 | opp_overlap 2447453 2447479, overlap 2447466 AAATCGTATGGCATA GCGCGTCAT ACGA ATGACGCGG TTTTCGACGAAAACG TERM 3171 2447466 - 2447485 + g 76 -12.2 -3.04398 | opp_overlap 2447453 2447479, overlap 2447465 AATCGTATGGCATAG CGCGTCAT ACGA ATGACGCG GTTTTCGACGAAAAC TERM 3172 2448768 - 2448744 - g 70 -2.7 -4.76075 | overlap 2448735 2448745 ATCAGATCAACAAAA TGCTGACCAAA GAG TCCGGTCTGCT GGGTCTGACTGAAGT ackA 2447939 - 2449141 + | acetate kinase TERM 3173 2449145 - 2449172 + F 100 -16.4 -4.37886 | gap 1, overlap 2449147 CTGACTGCCTGATTT CA-CACCGCCAGC CTC GCTGGCGGTGCTG TTTTGTAACCCGTCC TERM 3174 2449147 - 2449169 + F 100 -19.2 -2.8733 | overlap 2449145 GACTGCCTGATTTCA CACCGCCAGC CTC GCTGGCGGTG CTGTTTTGTAACCCG pta 2449218 - 2451362 + | phosphate acetyltransferase TERM 3175 2452142 - 2452109 - g 79 -13.3 -2.70932 | gap 1, overlap 2452114 TCGCCTTTGCAATTA TCATAGCCCCGC-TGA TGG TCAGGCTGGGCTATGA CAGCATTACCACCGT TERM 3176 2452645 - 2452661 + G 74 -7.2 -4.07687 | opp_overlap 2452624, overlap 2452624 AGAATGATGATCGCG CCCGCC TTGCT GGTGGG TTTTGCCAAAGGCAT yfcC 2451580 - 2453100 + | hypothetical protein TERM 3177 2453136 - 2453108 - T 95 -11.8 -4.20084 | gap 1, opp_overlap 2453107 ATCATTGATCCAAAA TGCCGGATGAGCA TCAG CGC-CATCCGGCA ATATCTCCATGATTA STM2340 2454102 - 2453149 - | putative transketolase TERM 3178 2453191 - 2453202 + g 77 -4.4 -4.83615 | AATCGCTTCGGCGGT GAGT CCGT ACTC TTTTTGTAAGAAATC TERM 3179 2453341 - 2453357 + g 84 -5.7 -5.03715 | overlap 2453354 GCTGTGGTTTTCACA CGTGACG ATA CGCCGCG TTTTTTCCGCGTAGT TERM 3180 2453833 - 2453822 - G 71 -5.8 -4.28018 | overlap 2453811 AAGAGCTGATCAAAA CAGC GACG GCTG GCAAAAGCGGTAAAG STM2341 2454925 - 2454095 - | putative transketolase TERM 3181 2454287 - 2454301 + g 71 -10 -3.57144 | opp_overlap 2454274, overlap 2454274 CACCGCCAGTAGTCC GGCGAT ATC ATCGCC TTTGACGGTGACGAC TERM 3182 2454580 - 2454606 + g 73 -5.1 -4.58395 | overlap 2454581 2454587 TGCCCTGTCCCAGTG AGC-CGGTCGTGG CGT CCACG-CCGCGCG TTTTTAGCCGATCCG ulaA 2456319 - 2454922 - | ascorbate-specific PTS system enzyme IIC STM2343 2456606 - 2456334 - | putative cytoplasmic protein TERM 3183 2456488 - 2456462 - G 72 -2.3 -4.91109 | gap 2, overlap 2456464 TGGCCATTACAAAAA GATCGG-CA-GCC CCG GGCGTGGCCGATG AAAGATCGGAGTGTT STM2344 2457130 - 2456687 - | putative phosphotransferase system enzyme II A component TERM 3184 2458377 - 2458348 - g 74 -10.1 -3.74224 | gap 1, opp_overlap 2458348 GTTAAATCAGGGAAA CTGGA-GCGATCGA AAA TCCATCGCCTCCAG TTTATGTATGCGGGA TERM 3185 2458348 - 2458377 + G 83 -10.1 -4.12532 | gap 1, opp_overlap 2458348 GTTAAATCAGGGAAA CTGGA-GCGATCGA AAA TCCATCGCCTCCAG TTTATGTATGCGGGA STM2345 2457383 - 2458402 + | putative transcriptional regulator STM2346 2458962 - 2458408 - | putative NTP pyrophosphohydrolase TERM 3186 2458433 - 2458447 + g 71 -4.2 -4.66833 | overlap 2458434 TCTTCCGGTTTCTCC TGGAGC GCG GCTTCG TTTTTGGCGTTGCGG yfcE 2459570 - 2459019 - | phosphodiesterase yfcF 2460270 - 2459626 - | putative glutathione S-transferase TERM 3187 2459861 - 2459877 + g 84 -5.7 -5.00616 | overlap 2459851 GCGCTGGCTTTTCCA GCCTCGC TTA GCGGCGC TTTTTTCGCCCCGGC TERM 3188 2459963 - 2459976 + g 100 -9.5 -4.88736 | CACGCCTGAATCTGT CGCGC GCGG GCGCG TTTTTGTAAATCGTG TERM 3189 2460245 - 2460232 - G 74 -2.3 -4.99035 | GTAGGGAGAGAAAAA GTTCG CATC CGACC ACAGCACAATAACAG yfcG 2460413 - 2461060 + | putative glutathione S-transferase TERM 3190 2461120 - 2461110 - f 73 -2.4 -5.14477 | TATACACGGAAAAAA CCTG CGT CCGG CACCCTTATTCGTAT TERM 3191 2461891 - 2461921 + G 70 -8.8 -3.68222 | overlap 2461892 GAGCATTTTGCTCAT GCGCTGGGTCGCGC GCT GCGCCGTCCGGCGA TTATTCGCATTCCGG TERM 3192 2461892 - 2461920 + G 72 -12.3 -2.80612 | overlap 2461891 AGCATTTTGCTCATG CGCTGGGTCGCGC GCT GCGCCGTCCGGCG ATTATTCGCATTCCG TERM 3193 2462020 - 2462008 - g 80 -9.1 -4.07568 | CGGGCGCTGCCAAAA CGGCT TGA AGCCG CCGGATTCGCATTTC yfcH 2461186 - 2462079 + | putative sugar nucleotide epimerase TERM 3194 2462097 - 2462128 + T 73 -4.2 -4.86731 | gap 1, overlap 2462100 CCCAAAGCGCCGTAT CCTGCCCGGTGAGCG ATG CGC-CGCCGGGCTTC TTTTATTTCAGCGAG TERM 3195 2462100 - 2462125 + T 100 -14.7 -4.54026 | gap 1, overlap 2462097 AAAGCGCCGTATCCT GCCCGGTGAGCG ATG CGC-CGCCGGGC TTCTTTTATTTCAGC hisP 2462907 - 2462131 - | histidine/lysine/arginine/ornithine transporter subunit hisM 2463625 - 2462918 - | histidine/lysine/arginine/ornithine transport protein hisQ 2464308 - 2463622 - | histidine/lysine/arginine/ornithine transport protein hisJ 2465273 - 2464491 - | histidine transport protein TERM 3196 2465380 - 2465341 - R 71 -10 -3.14564 | opp_overlap 2465342 2465344, overlap 2465344 2465353 CTATCGTGCCATTAA TCAGGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCCGGT TTATTTTGCATAAAA TERM 3197 2465342 - 2465379 + r 80 -6.9 -4.68908 | opp_overlap 2465341 2465344 2465353, overlap 2465344 TATCGTGCCATTAAT CAGGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCCGG TTTATTTTGCATAAA TERM 3198 2465377 - 2465344 - R 87 -14.7 -2.77899 | opp_overlap 2465342 2465344, overlap 2465341 2465353 TCGTGCCATTAATCA GGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCC GGTTTATTTTGCATA TERM 3199 2465473 - 2465450 - R 100 -10.4 -4.7497 | opp_overlap 2465435 2465469 CTTATGCACCAAAAA GGTGCAAAAC ATCT ATTTTGCACC GTGATAGTTCCCCAG argT 2466293 - 2465511 - | lysine/arginine/ornithine transport protein TERM 3200 2466186 - 2466153 - G 81 -8.1 -4.29929 | opp_overlap 2466155 ATCAAAGCCAATAAA CTCGCCTTTGGCATC TTTT GATGAGAAAGGCGCG TAGGTGGTATCTGTT TERM 3201 2466549 - 2466531 - R 95 -13.2 -4.37092 | ATCGCGGTTACAAAA TTGCCCTG AAA CAGGGCAA CAGGGACAATAATGC ubiX 2467151 - 2466582 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3202 2466711 - 2466700 - G 91 -7.2 -4.98436 | GGAAGATGATAAAAA GCCG GAAC CGGC GGCATAATCACCGCG STM2357 2468584 - 2467178 - | putative amino acid transporter TERM 3203 2467857 - 2467831 - G 77 -3.7 -5.07652 | opp_overlap 2467843, overlap 2467826 GGCCGTAAAACAAAA TGATTCTGAGA CCGAT CCCCAGGATCA CTTTCGGTAAAATAA TERM 3204 2468247 - 2468219 - G 81 -8.1 -4.24342 | gap 1 CTGGTGAGCAATAAA CCCT-GCGGCAG TGAGGT CGGCCGCCAGGG AAAAGACCCAGCTAA TERM 3205 2468642 - 2468616 - R 79 -11.4 -3.38046 | opp_overlap 2468618, overlap 2468614 2468617 2468631 TCGTGAGGTCAAAGA TGCCGCCGCGAC ATA GCCGCGGCGGTT ATGCGTTAACGCGTA TERM 3206 2468641 - 2468617 - R 86 -14.9 -2.62613 | opp_overlap 2468618, overlap 2468616 2468614 2468631 CGTGAGGTCAAAGAT GCCGCCGCGAC ATA GCCGCGGCGGT TATGCGTTAACGCGT TERM 3207 2468618 - 2468640 + r 100 -16.2 -3.41878 | opp_overlap 2468617 2468616 2468614 2468631 GTGAGGTCAAAGATG CCGCCGCGAC ATA GCCGCGGCGG TTATGCGTTAACGCG STM2358 2469751 - 2468648 - | putative cytoplasmic protein TERM 3208 2468770 - 2468787 + g 74 -8.4 -3.9712 | AATCTTCAATATCCA CCAGCG TATGAT CGCTGG TTTGTCCTAAGATAG TERM 3209 2468934 - 2468950 + g 71 -7.9 -3.94853 | overlap 2468939 2468944 TCGACGCCCAGCTCC CCGACCG GGA CGGTAGG TTTACTGTTCAGTTC TERM 3210 2469208 - 2469166 - G 80 -10.5 -3.85817 | gap 1, overlap 2469184 AGTTTCCCGCAGAAA GCCGCCGGACAGGAATACCG CTGT CAGC-TTCCAGCCGGGCGGC CAGCGCCAGAAAATC STM2359 2471174 - 2469753 - | putative amino acid transporter STM2360 2472662 - 2471265 - | putative diaminopimelate decarboxylase STM2361 2472873 - 2474300 + | putative regulatory protein purF 2475853 - 2474336 - | amidophosphoribosyltransferase cvpA 2476379 - 2475891 - | colicin V production protein TERM 3211 2476507 - 2476482 - R 100 -9.8 -5.27938 | ACGCGTAAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCACACTTTTTATCT dedD 2477364 - 2476690 - | hypothetical protein folC 2478622 - 2477354 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 3212 2478598 - 2478574 - G 70 -5.5 -4.38927 | TTTCCAGATAAGAAA GCCACGAGGCC AGG GGCGACGCAGC TTGAGGTATAGATTT TERM 3213 2478684 - 2478652 - R 100 -17.1 -3.06515 | opp_overlap 2478657, overlap 2478657 CTTTACGGTGAAAAG CAAAAGGGCAGAGCC TGC GGCCCTGCCCTTTTC AGTTATCAGGCCTCA TERM 3214 2478657 - 2478679 + r 100 -14.8 -4.3208 | opp_overlap 2478652 2478657 CGGTGAAAAGCAAAA GGGCAGAGCC TGC GGCCCTGCCC TTTTCAGTTATCAGG TERM 3215 2478679 - 2478657 - R 100 -17 -4.67038 | opp_overlap 2478657, overlap 2478652 CGGTGAAAAGCAAAA GGGCAGAGCC TGC GGCCCTGCCC TTTTCAGTTATCAGG accD 2479604 - 2478690 - | acetyl-CoA carboxylase subunit beta TERM 3216 2479742 - 2479730 - R 77 -3.3 -5.24531 | opp_overlap 2479730 ACTTTGGATAAAAAA GTGGT CGA ACCGC TGAGTTACTTTCTAT dedA 2480413 - 2479754 - | hypothetical protein truA 2481274 - 2480462 - | tRNA pseudouridine synthase A usg 2482287 - 2481274 - | putative semialdehyde dehydrogenase TERM 3217 2482342 - 2482313 - R 86 -11.5 -3.80279 | gap 1, opp_overlap 2482313, overlap 2482306 TCCAGAAATACATAA GCGTCCCTGTCGCA TTA TTCGACAGGGA-GC ATTAAGAAGACATTA pdxB 2483491 - 2482355 - | erythronate-4-phosphate dehydrogenase TERM 3218 2483812 - 2483789 - g 90 -5.9 -5.24129 | overlap 2483793 TCTGGGGATAAAAAA TGACGCGCC GCTACT GTCGCGCCA CTTCCCCGCCGCTGA TERM 3219 2484555 - 2484576 + G 70 -5.1 -4.45517 | GGCCTGTTGTTTATC GCGCTAATA ATTG TACTGGCGC TTTTCTGGCTGGTTT flk 2483595 - 2484596 + | flagella biosynthesis regulator STM2372 2485771 - 2484593 - | hypothetical protein TERM 3220 2484763 - 2484784 + g 95 -14.5 -3.54424 | CGCCGAGCGCCGTAC CGCGTACCT GTGC AGGTACGCG TTTCACAACCTCCAC TERM 3221 2485304 - 2485268 - G 71 -10.7 -3.22298 | GCTATGGATCAGCAA GCCCAACGGCGCACCGG CCG CCAGCGCGCCGTAAATC GCCATCCCGTTCCAC STM2373 2486325 - 2485951 - | putative cytoplasmic protein TERM 3222 2486349 - 2486364 + H 70 -4.8 -4.40561 | overlap 2486346 TTCCTTTCCCCTGAT GAAATA AAAA TATTTC TTCTTTTTCGCGAAA TERM 3223 2486418 - 2486430 + H 80 -6.3 -4.84359 | opp_overlap 2486418, overlap 2486407 TCTCAGAGTGAAAAA GAAAG TAA CTTTC TTTTTCTCGCGCTAA TERM 3224 2486430 - 2486418 - H 78 -6.3 -4.70659 | opp_overlap 2486407 2486418 TCTCAGAGTGAAAAA GAAAG TAA CTTTC TTTTTCTCGCGCTAA TERM 3225 2486474 - 2486461 - H 72 -5.3 -4.62069 | TTTTTACCTTAAAAA TATCG GTGC CGATA ACACATCTTCTTAGG TERM 3226 2486522 - 2486511 - g 83 -5.8 -4.90013 | GAATGGAACCAAAAA GCCA AGAC TGGC ATCGTGCAGATATTA STM2374 2486498 - 2486746 + | putative regulatory protein STM2375 2486915 - 2487283 + | putative cytoplasmic protein TERM 3227 2487645 - 2487607 - g 76 -5.3 -4.82901 | gap 1, opp_overlap 2487639, overlap 2487583 CTCGGCGGAGAAAAA GTGGATGTTCTGTTGGCT ACAG AGTCAAC-GCCCATCCAC CTGGAAGTTTATACC STM2376 2487283 - 2487801 + | putative periplasmic protein STM2377 2488524 - 2487868 - | putative inner membrane protein TERM 3228 2488568 - 2488587 + r 100 -13.6 -4.09805 | opp_overlap 2488568 CCCTGAATGAAAAAA CAGGTCGC ATTA GCGACCTG TTTCATTGTTGATAC TERM 3229 2488587 - 2488568 - R 100 -13.6 -5.26875 | opp_overlap 2488568 CCCTGAATGAAAAAA CAGGTCGC ATTA GCGACCTG TTTCATTGTTGATAC fabB 2489836 - 2488622 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 3230 2490100 - 2490116 + G 74 -2.1 -5.06414 | TAATGACAATGGACT CGAAGAG ACA CGCTACG TTTTTCTTGGCGGCA TERM 3231 2491804 - 2491788 - g 72 -3.5 -4.78237 | opp_overlap 2491795 TAGCCGATAATAAAA CGTCGGC GGC GCCTGCG CCTGTGTATCCGGGT mnmC 2489996 - 2491996 + | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 3232 2492038 - 2492011 - T 75 -11.2 -3.08798 | opp_overlap 2492004 2492037 ATGGGTCAGTCAATA GCGGAAGGCGGC AAGC GTCGCCTTCCGG CCCACGGCGTTATTG yfcL 2492323 - 2492048 - | putative cytoplasmic protein TERM 3233 2492099 - 2492134 + g 78 -6.9 -4.60924 | gap 2, overlap 2492100 2492101 CGCTTTGACTAACGC CTGATC-GCG-CGGCGA CAGT TCGCCGGCGCCGATCGC TTTTTCCAGACTTTG TERM 3234 2492100 - 2492133 + g 73 -10.4 -3.35832 | gap 2, overlap 2492099 2492101 GCTTTGACTAACGCC TGATC-GCG-CGGCGA CAGT TCGCCGGCGCCGATCG CTTTTTCCAGACTTT TERM 3235 2492101 - 2492132 + g 72 -11.7 -2.60776 | gap 2, overlap 2492100 2492099 CTTTGACTAACGCCT GATC-GCG-CGGCGA CAGT TCGCCGGCGCCGATC GCTTTTTCCAGACTT yfcM 2492904 - 2492356 - | putative cytoplasmic protein yfcA 2493713 - 2492904 - | hypothetical protein TERM 3236 2493228 - 2493204 - G 80 -9.9 -3.94381 | overlap 2493219 2493220 2493222 ACATAAGGTGACAAA CGCCAGAGCGT AAA ACGACCCGGCG GCAGGCCCGAAAAAG mepA 2494537 - 2493713 - | penicillin-insensitive murein endopeptidase TERM 3237 2494514 - 2494527 + g 100 -3.7 -5.77856 | GACAAACCATGCCAG CAGCG CAAT CGCGG TTTTTTTCATTTCTT aroC 2495626 - 2494541 - | chorismate synthase yfcB 2496594 - 2495662 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 3238 2496787 - 2496773 - g 95 -5.6 -5.34655 | overlap 2496775 GAATGAAAAAGAAAA CATCGC TCA GCGAGG AGGACCAGGCGCTGT TERM 3239 2496785 - 2496775 - g 74 -6.8 -4.26857 | overlap 2496773 ATGAAAAAGAAAACA TCGC TCA GCGA GGAGGACCAGGCGCT yfcN 2496760 - 2497311 + | hypothetical protein sixA 2497896 - 2497411 - | phosphohistidine phosphatase fadJ 2500252 - 2498105 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3240 2498455 - 2498467 + g 93 -4.8 -5.46698 | opp_overlap 2498455 TAAGCTTATAAATAG CAGG GTCAA CCTG TTTTTTGCTTTTACG TERM 3241 2498801 - 2498815 + g 91 -7.8 -5.01732 | ATCACTGACGACTAT CGGGGT TTT ACCCTG TTTTTTCGCCAGCTT TERM 3242 2499333 - 2499361 + g 80 -4.3 -5.05782 | overlap 2499336 CCCACGCTGTTCAGC GGGCCGGGCGGCG CAT CGCTACCGGGATC TTTTTTCACCTCGGT TERM 3243 2499405 - 2499391 - G 74 -3.4 -4.87803 | overlap 2499393 TACTGGCAAAGAAAA TAGCGC GCA GCGCCT GCGATTGAGGCGTCA TERM 3244 2499403 - 2499393 - G 74 -8.2 -4.05678 | overlap 2499391 CTGGCAAAGAAAATA GCGC GCA GCGC CTGCGATTGAGGCGT TERM 3245 2499515 - 2499534 + g 76 -3.4 -5.08169 | overlap 2499510 2499532 AATGATCCGCTCCGT CGCCGGAT AATT ACCCTGCG TTTTTTGCGCTGTCT fadI 2501562 - 2500252 - | 3-ketoacyl-CoA thiolase TERM 3246 2500732 - 2500719 - G 76 -9.5 -3.84406 | opp_overlap 2500728 CGGTCATCAGAATAA CGGCG GCAG CGCCG TCGGTCAGCGGTGTA TERM 3247 2501729 - 2501693 - R 100 -9.4 -5.66684 | overlap 2501698 GAAGCGACAAAAAAA GAAAACGCCTCCGCCA GATGA TGACGGAGGCGTCGTG AATGAACGGATTAAC TERM 3248 2501724 - 2501698 - R 100 -15.9 -5.61277 | overlap 2501693 GACAAAAAAAGAAAA CGCCTCCGCCA GATGA TGACGGAGGCG TCGTGAATGAACGGA yfcZ 2502024 - 2501740 - | putative cytoplasmic protein TERM 3249 2502995 - 2502980 - g 72 -11.8 -2.68823 | overlap 2502979 GTCGCGGCACAGAAT CCGGCG CTGG CGCCGG TCGCGGGTCAGATTC fadL 2502389 - 2503702 + | long-chain fatty acid outer membrane transporter TERM 3250 2503721 - 2503751 + T 86 -11.3 -3.78351 | opp_overlap 2503727, overlap 2503727 CTTTCTGAAACGGAT CAAAAAGGTGAGC ATTGC GCTCACCTTTTTA TTTACTGCCGTTTAT TERM 3251 2503745 - 2503727 - T 100 -11 -4.78764 | opp_overlap 2503727 2503721 GAAACGGATCAAAAA GGTGAGCA TTG CGCTCACC TTTTTATTTACTGCC TERM 3252 2503727 - 2503745 + T 100 -10.3 -5.33405 | opp_overlap 2503727, overlap 2503721 GAAACGGATCAAAAA GGTGAGC ATTGC GCTCACC TTTTTATTTACTGCC vacJ 2504518 - 2503763 - | lipoprotein precursor TERM 3253 2503792 - 2503814 + g 71 -6.3 -4.2679 | gap 1 TCTCTTTGAGTTCGT CCTGAATCGC CTGC GCG-TTCGGG TTTTCCTGCGGCTTG yfdC 2504807 - 2505748 + | hypothetical protein TERM 3254 2505816 - 2505804 - T 81 -3.3 -5.4505 | CCGGCGAATAAAAAA CGCTA TAC TGGCG CCGCGTTGTCCCCTT TERM 3255 2506044 - 2506013 - T 84 -8.7 -4.72986 | overlap 2506015 TACGTTCAGCAAAAA GTCGTCATCGGCC GGTTAT GACCGATGACATC CCGATGTGGTCTAGA pgtE 2506993 - 2506055 - | outer membrane protease pgtA 2508508 - 2507261 - | activator TERM 3256 2508177 - 2508190 + g 73 -5.2 -4.57073 | AATATCAACAGCTTG CCCG GATCGA CGGG TTTTTGCAGAAAATC pgtB 2510504 - 2508498 - | phosphoglycerate transport system sensor protein TERM 3257 2509591 - 2509622 + g 78 -6.5 -4.56597 | gap 1, opp_overlap 2509578 AAGCGCCCTAGCGTA GCCTCTCTGG-CGC GGCTG GCGTCCAGTAAGGC TTTTTGCGCCGCAAC pgtC 2511694 - 2510501 - | phosphoglycerate transport regulatory protein precursor TERM 3258 2512634 - 2512656 + G 74 -7.6 -4.1964 | overlap 2512625 GTTGGCGGCGGGATC GTCGCGCCTA TCG TCGGTGCGGC TTTTGCGATATTGGG pgtP 2512130 - 2513521 + | transporter TERM 3259 2513548 - 2513566 + T 93 -16 -3.11072 | opp_overlap 2513548 TCCTGGGGAACAGAA GCGCCGAC ATT GTCGGCGC TATCTATTCACTGGC TERM 3260 2513566 - 2513548 - T 100 -16 -3.65812 | opp_overlap 2513548 TCCTGGGGAACAGAA GCGCCGAC ATT GTCGGCGC TATCTATTCACTGGC STM2400 2514039 - 2513797 - | putative inner membrane protein ddg 2514561 - 2515481 + | lipid A biosynthesis palmitoleoyl acyltransferase TERM 3261 2515481 - 2515502 + T 74 -7.3 -4.24002 | opp_overlap 2515486, overlap 2515486 GTCACTCTACATCTG AAAAAGGCC GCAA GGCCTTTTA TTTTGGCATTTCGCA TERM 3262 2515486 - 2515497 + T 87 -7.2 -5.10163 | opp_overlap 2515486, overlap 2515481 TCTACATCTGAAAAA GGCC GCAA GGCC TTTTATTTTGGCATT TERM 3263 2515497 - 2515486 - T 80 -7.2 -4.64766 | opp_overlap 2515486 2515481 TCTACATCTGAAAAA GGCC GCAA GGCC TTTTATTTTGGCATT TERM 3264 2515569 - 2515586 + T 82 -5.5 -5.24989 | opp_overlap 2515569 2515568 GCTTTTAGCGATAAG TCTCCTG TTTA CAGGCGA TTTTTTACTGTGTCG TERM 3265 2515971 - 2516000 + T 86 -9.3 -4.4767 | opp_overlap 2515976, overlap 2515976 AAGTACAATGCAAAG AAAAACAGGAGCC ATGG GGCTCCTGTTTGC TTTTCTACTCCGTGC TERM 3266 2515995 - 2515976 - T 100 -13.6 -5.33026 | opp_overlap 2515971 2515976 CAATGCAAAGAAAAA CAGGAGCC ATGG GGCTCCTG TTTGCTTTTCTACTC TERM 3267 2515976 - 2515995 + T 100 -13.6 -4.28487 | opp_overlap 2515976, overlap 2515971 CAATGCAAAGAAAAA CAGGAGCC ATGG GGCTCCTG TTTGCTTTTCTACTC yfdZ 2517243 - 2516005 - | aminotransferase TERM 3268 2517024 - 2517011 - G 71 -9.5 -3.53091 | overlap 2516997 ATCGCGCGGCGTAAA CGCGG TATG CCGCG AGACGTGGAATAACC TERM 3269 2517839 - 2517855 + r 93 -13.7 -3.57144 | opp_overlap 2517839 AGGCAATGAAAAAAA CCGCGTG AGG CACGCGG TTTGAGACTGACAAG TERM 3270 2517855 - 2517839 - R 100 -13.7 -5.64006 | opp_overlap 2517839 AGGCAATGAAAAAAA CCGCGTG AGG CACGCGG TTTGAGACTGACAAG TERM 3271 2517897 - 2517944 + r 82 -12.9 -2.91593 | gap 1, opp_overlap 2517894, overlap 2517898 TTGCCTGATAACGCT GCGCTTATCAGGCCTACAGATG ACACA CTTTTGTAGGCCGGATAAG-GC GTTTATGCCACCATC TERM 3272 2517898 - 2517945 + r 95 -12.9 -3.86524 | gap 1, opp_overlap 2517894, overlap 2517897 TGCCTGATAACGCTG CG-CTTATCAGGCCTACAGATG ACACA CTTTTGTAGGCCGGATAAGGCG TTTATGCCACCATCT glk 2518929 - 2517964 - | glucokinase TERM 3273 2518884 - 2518834 - G 76 -11.8 -3.03243 | opp_overlap 2518819, overlap 2518824 2518883 ATCCAGGCCGGAATA CGTTTTGGCCTGCGAGATTTCTCC ACT GGCGATATCACACAGGGCAAGACG CGCATTCGTGCCGCC TERM 3274 2520085 - 2520057 - g 71 -9.6 -3.53444 | gap 1, opp_overlap 2520065 TTAGCCGTCGTCAAA CTCGCCG-CGC TGGTCATC GCGGCGGCGAG CGGCTTTCGCGGCGG STM2404 2519133 - 2520368 + | hypothetical protein STM2405 2522040 - 2520388 - | indolepyruvate decarboxylase TERM 3275 2520878 - 2520846 - G 89 -13.4 -3.65812 | overlap 2520864 2520868 GCGGCTGTAACACAA CTTCCGCGCCGTCA GGAAG CGACAGCGCGGCAG CGCCAAAAGCTGCTG TERM 3276 2521684 - 2521667 - G 74 -3.4 -4.85599 | opp_overlap 2521679, overlap 2521668 CTCATGCGATAAAAA TGACGA AAATCG CCGTCA CCGAGGGTATGGTGC TERM 3277 2522168 - 2522156 - H 70 -4.7 -4.49756 | CGGCAAACAGTAAAA GCCGG ATA CCGCC TGGCGAGTGTAACCG STM2406 2522220 - 2523218 + | putative oxidoreductase ypeC 2523332 - 2523658 + | putative periplasmic protein TERM 3278 2523704 - 2523675 - T 72 -9.4 -3.61398 | opp_overlap 2523675 2523672 2523670 2523676, overlap 2523677 CCTCCTGCTGAATAA CA-GCCCGATGACG CCCA CG-CATCGGGCCTG CTATCTTTCTGTCTT TERM 3279 2523701 - 2523677 - T 85 -12.2 -3.38812 | gap 1, opp_overlap 2523676 2523675 2523672 2523670, overlap 2523675 TCCTGCTGAATAACA GCCCGATGACG CCCA CG-CATCGGGC CTGCTATCTTTCTGT mntH 2524960 - 2523719 - | manganese transport protein MntH TERM 3280 2524193 - 2524181 - G 86 -10.5 -4.19735 | GCCGCTAAAATGAAA CGCCG CCG CGGCG GTCGCCATCATTGCC TERM 3281 2524488 - 2524477 - G 72 -3.6 -4.82901 | CGGCGGCGACAAAAA GCAG TAAA CCGC CGATGACTTTTTCAA TERM 3282 2524991 - 2524976 - H 82 -7.6 -4.56597 | opp_overlap 2524976 CTTTTGCCTCAAAAA CATAGC CTTT GCTATG TTTCATGCTATGTTT TERM 3283 2524976 - 2524991 + H 71 -7.6 -3.85082 | opp_overlap 2524976 CTTTTGCCTCAAAAA CATAGC CTTT GCTATG TTTCATGCTATGTTT TERM 3284 2525896 - 2525917 + G 74 -7.3 -4.12397 | TGTGGTCGCAGCGCT GGTTCTGAA CATG TTCAGCACC TTTATCGTTCTGTCG nupC 2525303 - 2526505 + | nucleoside transport TERM 3285 2526543 - 2526526 - T 95 -12.7 -3.97368 | opp_overlap 2526526 GGTTTAATGCAGAAA CCGGGGA GCTA TCCCCGG TTTTTTTATGCCGCT TERM 3286 2526526 - 2526543 + T 100 -12.7 -5.61596 | opp_overlap 2526526 GGTTTAATGCAGAAA CCGGGGA GCTA TCCCCGG TTTTTTTATGCCGCT yfeA 2528747 - 2526558 - | hypothetical protein TERM 3287 2526777 - 2526788 + g 74 -7.2 -4.15106 | GATTTTAATGATGTC CGCC TTGA GGCG TTTTAGCCGTTCATA TERM 3288 2527260 - 2527235 - G 70 -5.4 -4.52589 | gap 1, overlap 2527236 2527238 GTTGCGCATACAAAA CCAGCGCGCCG CGCTC CAGCGC-CTGA CGGATTTTCTGCAAC TERM 3289 2528928 - 2528909 - H 100 -11.4 -5.2197 | opp_overlap 2528909 GACAAAAAGCAAAAA CCCCCGCT TTTC AGCGAGGG TTTGAATGTTGGTGG TERM 3290 2528909 - 2528928 + H 76 -9.2 -3.77831 | opp_overlap 2528909 GACAAAAAGCAAAAA CCCCCGCT TTTC AGCGAGGG TTTGAATGTTGGTGG yfeC 2529353 - 2529715 + | putative negative regulator yfeD 2529717 - 2530109 + | putative negative regulator TERM 3291 2530148 - 2530114 - T 95 -11.6 -4.2461 | opp_overlap 2530117 2530121, overlap 2530117 2530121 AGGCGGACTAACAAA TAATAAACGGCAGG CGTCTGC CCTGCCGTTTATTC TGTTTCAGCTGGCGT TERM 3292 2530117 - 2530145 + T 95 -13.3 -3.82946 | opp_overlap 2530114 2530117 2530121, overlap 2530121 CGGACTAACAAATAA TAAACGGCAGG CGTCTGC CCTGCCGTTTA TTCTGTTTCAGCTGG TERM 3293 2530145 - 2530117 - T 95 -13.3 -4.24413 | opp_overlap 2530117 2530121, overlap 2530114 2530121 CGGACTAACAAATAA TAAACGGCAGG CGTCTGC CCTGCCGTTTA TTCTGTTTCAGCTGG TERM 3294 2530141 - 2530121 - T 93 -9.7 -4.67968 | opp_overlap 2530121 2530117, overlap 2530117 2530114 CTAACAAATAATAAA CGGCAGG CGTCTGC CCTGCCG TTTATTCTGTTTCAG TERM 3295 2530121 - 2530141 + T 90 -9.7 -4.52143 | opp_overlap 2530117 2530114 2530121, overlap 2530117 CTAACAAATAATAAA CGGCAGG CGTCTGC CCTGCCG TTTATTCTGTTTCAG gltX 2531578 - 2530163 - | glutamyl-tRNA synthetase TERM 3296 2530427 - 2530444 + g 80 -4.7 -5.0133 | TTCCAGCGGCTGACG CGCCACC GGGC GGAGGTG TTTTTTCGCCGCATC TERM 3297 2532264 - 2532232 - R 71 -9.9 -3.19463 | opp_overlap 2532233 2532241, overlap 2532233 2532241 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATATGGAA TERM 3298 2532233 - 2532263 + r 87 -14.9 -2.90763 | opp_overlap 2532232 2532233 2532241, overlap 2532241 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATATGGA TERM 3299 2532263 - 2532233 - R 80 -13.4 -2.51464 | opp_overlap 2532233 2532241, overlap 2532232 2532241 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATATGGA TERM 3300 2532241 - 2532255 + r 100 -8.5 -5.24989 | opp_overlap 2532233 2532232 2532241, overlap 2532233 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 3301 2532255 - 2532241 - R 100 -9.2 -5.17576 | opp_overlap 2532241 2532233, overlap 2532233 2532232 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3302 2532280 - 2532306 + r 85 -13.8 -3.09834 | opp_overlap 2532280, overlap 2532282 2532293 ATCTGCGATATGGAA GATTCGAACCTG TCG CAGGTTCGGGTC TTGCCTGATGCGCTG TERM 3303 2532282 - 2532304 + r 73 -10.6 -3.10796 | opp_overlap 2532280, overlap 2532280 2532293 CTGCGATATGGAAGA TTCGAACCTG TCG CAGGTTCGGG TCTTGCCTGATGCGC xapR 2533278 - 2532394 - | DNA-binding transcriptional activator XapR TERM 3304 2533209 - 2533184 - G 75 -11.9 -2.87564 | opp_overlap 2533177, overlap 2533189 GGAGGTTGTGACATA TTTAACCGGGC AGCA GCCCGGCCAAA ATGCAATTCTTCTGC TERM 3305 2533204 - 2533189 - G 76 -11.8 -3.15999 | opp_overlap 2533177, overlap 2533184 TTGTGACATATTTAA CCGGGC AGCA GCCCGG CCAAAATGCAATTCT STM2420.1n 2533488 - 2533330 - | hypothetical protein TERM 3306 2533540 - 2533511 - R 88 -8.6 -4.82901 | overlap 2533513 CCTTGTTCATAAAAA TGGACTGGCGAA CATCCT CTCGCCAGTCAA ATAAAATTAATGTGC TERM 3307 2533538 - 2533513 - R 73 -11.2 -2.6933 | overlap 2533511 TTGTTCATAAAAATG GACTGGCGAA CATCCT CTCGCCAGTC AAATAAAATTAATGT xapB 2534803 - 2533547 - | xanthosine permease TERM 3308 2534843 - 2534829 - H 79 -9.2 -4.03234 | TTGCCGTGAGATAAA GCCCCA ATA CGGGGC CGTAGTCATTGTGTT yfeN 2535947 - 2536708 + | hypothetical protein TERM 3309 2536736 - 2536715 - T 70 -10.1 -3.09273 | CTGTTTTAACACACA GCCCTGTCA AAAA TGGCAGGGC AAGACCGCACCTCAC yfeR 2537696 - 2536770 - | putative transcriptional regulator TERM 3310 2537901 - 2537920 + G 79 -2.8 -5.28176 | overlap 2537903 TTGAAGGCATTACGA CAGCGG CTATCGCT CTGCTG TTTTTTATGCATGGC TERM 3311 2538176 - 2538206 + G 81 -8.3 -4.34402 | gap 1 GTCGCGGCCGCGGTG TGCTCAGC-GTCTG CGTC CAGCCTGCTGGGCA TTTTCCTGTCGCCGC TERM 3312 2538629 - 2538600 - g 86 -4.1 -5.40072 | opp_overlap 2538602 2538603, overlap 2538601 2538602 GCGGTTCGAAAAAAA GCCTGGCCAACGG GATC CCGATGGCCAATA TTCTGTTTCCGACGT TERM 3313 2538627 - 2538602 - g 71 -11.1 -2.89655 | opp_overlap 2538602 2538603, overlap 2538601 2538600 GGTTCGAAAAAAAGC CTGGCCAACGG GATC CCGATGGCCAA TATTCTGTTTCCGAC TERM 3314 2538603 - 2538626 + G 72 -12.4 -2.69057 | opp_overlap 2538602 2538601 2538600, overlap 2538602 GTTCGAAAAAAAGCC TGGCCAACGG GATC CCGATGGCCA ATATTCTGTTTCCGA yfeH 2537786 - 2538784 + | putative Na+-dependent transporter STM2426 2539008 - 2538781 - | putative cytoplasmic protein ligA 2541016 - 2539001 - | NAD-dependent DNA ligase LigA TERM 3315 2540104 - 2540081 - G 71 -8.1 -3.87551 | gap 1 AGCAGGAAATTTAAA CGC-CACCGC CCAGC GCGGCGCGCG GGCCACAAAGCCCAG TERM 3316 2541040 - 2541056 + r 74 -10.8 -3.17901 | opp_overlap 2541040, overlap 2541053 ATCAATGATAAAAAA CCCCCG ACAGG CGGGGG TTACGTTAAAAATGT TERM 3317 2541056 - 2541040 - R 100 -10.8 -5.38249 | opp_overlap 2541040 2541053 ATCAATGATAAAAAA CCCCCG ACAGG CGGGGG TTACGTTAAAAATGT zipA 2542074 - 2541088 - | cell division protein ZipA TERM 3318 2542794 - 2542818 + G 80 -4.9 -5.06414 | opp_overlap 2542800 TATTCCTGGCATTGG CCAAACCATCG CGC CGGTGCTGTGG TTTTTGTTCAGCGCC cysZ 2542306 - 2543067 + | putative sulfate transport protein CysZ cysK 2543231 - 2544202 + | cysteine synthase A TERM 3319 2544231 - 2544246 + F 87 -6.8 -5.26316 | opp_overlap 2544231 2544222 AAAACGCGTAAAAAA GCACCT TTTT GGGTGC TTTTTTGTGGCCTGC TERM 3320 2544246 - 2544231 - f 83 -6.1 -5.08011 | opp_overlap 2544231, overlap 2544222 AAAACGCGTAAAAAA GCACC TTTTTG GGTGC TTTTTTGTGGCCTGC ptsH 2544586 - 2544843 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) ptsI 2544892 - 2546619 + | phosphoenolpyruvate-protein phosphotransferase TERM 3321 2547069 - 2547053 - g 74 -2.2 -5.06414 | opp_overlap 2547064 TTGCTGGAAGAAAAA GCCAAG TCTAC CCTGAC TCCGGTTGTTATCTC crr 2546660 - 2547169 + | glucose-specific PTS system component TERM 3322 2547206 - 2547189 - T 93 -12.7 -3.67597 | opp_overlap 2547189 TGCCGCAGTGAAGAA TGGCGCC TTTG GGCGCCA TTTTTTTGCCTGTAC TERM 3323 2547189 - 2547206 + T 100 -12.7 -5.50499 | opp_overlap 2547189 TGCCGCAGTGAAGAA TGGCGCC TTTG GGCGCCA TTTTTTTGCCTGTAC STM2434 2547557 - 2547318 - | putative cytoplasmic protein pdxK 2548420 - 2547554 - | pyridoxal kinase TERM 3324 2548979 - 2549023 + G 74 -2 -5.02476 | gap 1, overlap 2548982 TGAAAGACTGCTTTG CGCGCATCTGCTGCCG-GGCG ACAG CGTCGCGGTGGAAGATCCCTG TTTTTTAAGCAGTAT ptsJ 2548503 - 2549795 + | putative regulatory protein yfeJ 2549810 - 2550529 + | glutamine amidotransferase yfeK 2550588 - 2550968 + | hypothetical protein yfeL 2550981 - 2551520 + | putative membrane carboxypeptidase cysM 2552562 - 2551651 - | cysteine synthase B TERM 3325 2552523 - 2552543 + g 85 -8.9 -4.38273 | GACGTTGTAATTTGA CCAGCGGCG TAT TGCCGATGG TTTGTTCTAATGTAT TERM 3326 2552607 - 2552582 - R 100 -9.7 -5.02074 | gap 1 TCAGCTCGTAAAAAA GCCCGGTATGCG TAG CGC-CACCGAGC GATAACTATACAAAT cysA 2553727 - 2552630 - | sulfate/thiosulfate transporter subunit TERM 3327 2553287 - 2553301 + g 100 -11.4 -4.82901 | overlap 2553280 GGCAAGCGCGCGCGC CAGCGC CAC GCGCTG TTTTTGTCCGCCGGA TERM 3328 2553527 - 2553498 - G 70 -3.4 -4.78848 | TGCTGAAACACAAAA CCGACTTTACGC TCACGC GCGTGCAGGCGG CTAACGTCCGTACCG cysW 2554592 - 2553717 - | sulfate/thiosulfate transporter permease subunit cysU 2555425 - 2554592 - | sulfate/thiosulfate transporter subunit cysP 2556441 - 2555425 - | thiosulfate transporter subunit TERM 3329 2556588 - 2556561 - R 95 -12.8 -3.84992 | gap 1, overlap 2556548 2556562 AAGGGAATAAGAGAA TC-CCTCCCCACG CGG CGTGAGGAGGAGA CCGGCATCAATCAGA TERM 3330 2556586 - 2556562 - R 87 -14.3 -2.8991 | overlap 2556548 2556561 AGGGAATAAGAGAAT CCCTCCCCACG CGG CGTGAGGAGGA GACCGGCATCAATCA ucpA 2557390 - 2556599 - | short chain dehydrogenase TERM 3331 2557525 - 2557508 - R 100 -12.7 -5.48825 | opp_overlap 2557504 TATTAGGTAAAAAAA TCCCCGC GGAG GCGGGGA TGGGCATTTTTATGC STM2446 2558527 - 2557628 - | putative iron-dependent peroxidase TERM 3332 2558566 - 2558549 - R 86 -11.3 -3.68359 | opp_overlap 2558549 TCCTGAAAATGAGAA TGCCACG CAGT CGTGGCA TTAATGGAGGCTATT TERM 3333 2558549 - 2558566 + r 77 -11.3 -3.15427 | opp_overlap 2558549 TCCTGAAAATGAGAA TGCCACG CAGT CGTGGCA TTAATGGAGGCTATT STM2447 2559197 - 2558622 - | hypothetical protein TERM 3334 2559037 - 2559065 + g 87 -13.8 -3.19389 | GCCGGCTCTTCCAGC GGCGTGGCGGCG GTCAG CGCTCCCACGCC TTGCTCAGTGACTTC yfeZ 2559708 - 2559259 - | putative inner membrane protein STM2449.S 2560120 - 2559695 - | putative acetyltransferase TERM 3335 2560760 - 2560771 + G 72 -3.6 -4.70879 | opp_overlap 2560756, overlap 2560756 CCAATCCGAAAGCAG CGGG CGCT TCCG TTTTTGCGCTTTCCA TERM 3336 2561134 - 2561123 - g 71 -5.8 -4.36914 | CGTTTCGCCAGAAAA TCGC TACG GCGA TCGCCAACGGCATCA amiA 2560333 - 2561202 + | N-acetylmuramoyl-l-alanine amidase I TERM 3337 2561563 - 2561553 - g 71 -4.6 -4.58395 | opp_overlap 2561553 TTTATTGCCGAAAAA CCGG GCG CCGA TCCGGTATGGTGGTT TERM 3338 2561739 - 2561759 + G 76 -3.2 -5.07107 | gap 1, opp_overlap 2561727 2561729, overlap 2561743 AAACACCGCAACGAG CAGCGCGGC GTTG GCGGC-CTG TTTTTTGACGATTTG hemF 2561205 - 2562104 + | coproporphyrinogen III oxidase STM2452 2562125 - 2562454 + | putative inner membrane protein TERM 3339 2562876 - 2562858 - g 72 -2.4 -4.84359 | TGAGCTTTACAAAAA GCTCTC CGATGAT GAAAGC CGCGACATGGTCGAT STM2453 2562583 - 2563860 + | putative cytoplasmic protein TERM 3340 2563926 - 2563939 + T 73 -9.5 -3.30124 | CGCTTCCCCGGAGGC GGCGC TGGC GCGCC TTGTCCGGGCTACCA eutR 2565112 - 2564060 - | transcriptional regulator EutR eutK 2565654 - 2565160 - | putative carboxysome structural protein eutL 2566326 - 2565667 - | putative carboxysome structural protein eutC 2567232 - 2566336 - | ethanolamine ammonia-lyase small subunit TERM 3341 2566642 - 2566624 - G 73 -8.8 -3.91144 | opp_overlap 2566628 2566628 2566629, overlap 2566627 2566628 GCCATAGCGCACAAA GAACGGCG TGC CGACGTTC AGCCCGGCCTGCTTC eutB 2568612 - 2567251 - | ethanolamine ammonia-lyase heavy chain eutA 2570027 - 2568624 - | reactivating factor for ethanolamine ammonia lyase TERM 3342 2568980 - 2568948 - G 75 -12.8 -2.55351 | gap 1, overlap 2568947 2568956 2568957 CGGGTCGAGATCAAG CTGGAGAAGCGCCTG CCGC CAGGCG-TTCACCAG ATCGGCGTCATCCTG TERM 3343 2569692 - 2569680 - G 76 -9.1 -3.96148 | GCTGGCGACCACAAA GTCGC CCA GCGAC TGCGAGAGCGCCATG eutH 2571250 - 2570024 - | putative transport protein TERM 3344 2571049 - 2571016 - G 71 -8.1 -3.80174 | gap 1, overlap 2571030 ATACCGGGATAATAA CCGGCCCCAGTACATG CGC CA-GCACCGGCGCCAG CGCGGTCATACCGAC TERM 3345 2571233 - 2571215 - G 74 -7.5 -4.12857 | opp_overlap 2571214 2571215 2571217 AATCAGCATAAAGAA CATCATG ATGTA CATGATG ATTTCGTTAATTCCC eutG 2572557 - 2571370 - | putative transport protein TERM 3346 2572461 - 2572490 + g 70 -7.1 -4.11484 | gap 1 CGAGCGCCCCAAGTC CGCACAGCGTGACC GGC GGT-ACGCTGAACG TTTTCACCCGTTGCA eutJ 2573386 - 2572547 - | ethanolamine utilization protein TERM 3347 2573282 - 2573321 + g 76 -12.9 -2.70932 | opp_overlap 2573281 2573280 2573284, overlap 2573284 2573310 GCAGGTGCCCAAATC GACGCCCAGCC-ACAGCGG TGTA TCGCTGGCGGC-GGGCGTC TGGTTACACAGGGCC TERM 3348 2573310 - 2573341 + g 91 -10 -4.66953 | opp_overlap 2573284 2573281 2573280, overlap 2573284 2573282 AGCGGTGTATCGCTG GCGGCGGGCGTCTG GTTA CACAGGGCCGCCGC TTTTTGCAGTCTTGG eutE 2574800 - 2573397 - | putative aldehyde oxidoreductase TERM 3349 2574498 - 2574519 + g 83 -7.9 -4.60924 | opp_overlap 2574484 2574486 ACACTCGACGCCCGG CGTGCCGCG CGCC TGCGCCACG TTTTTGGCAAATTTA eutN 2575111 - 2574812 - | putative detox protein TERM 3350 2575184 - 2575196 + r 70 -9.1 -3.30124 | overlap 2575163 TTCATGCCGGATGGC GACGC TGC GCGTC TTATCCGGCCTACCA eutM 2575502 - 2575212 - | putative detox protein eutD 2576559 - 2575543 - | phosphotransacetylase TERM 3351 2575777 - 2575803 + g 73 -5.1 -4.56597 | gap 1, overlap 2575780 AATCATCACGTTGGC GCGGCCTTGCAG CGGG CTGTCAGGC-GC TTTTTGCGCGGCGAC TERM 3352 2576274 - 2576285 + g 81 -3.6 -5.24129 | overlap 2576271 TAAGCTTTTCCACTG CGTC CGGC GGCG TTTTTTCTCCGGCAC eutT 2577359 - 2576556 - | putative cobalamin adenosyltransferase TERM 3353 2577037 - 2577055 + g 75 -6.6 -4.37886 | overlap 2577011 2577038 CGAAAGCCGAGGCGC GGGTCGCT TTT GGCGACCA TTTTGTCCGCCGTCA eutQ 2578045 - 2577356 - | putative ethanolamine utilization protein eutP 2578502 - 2578023 - | putative ethanolamine utilization protein eutS 2578850 - 2578515 - | putative carboxysome structural protein TERM 3354 2579252 - 2579228 - R 90 -9.9 -4.55295 | opp_overlap 2579231, overlap 2579230 2579231 CGGCGCATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAGATGCGCCTAT TERM 3355 2579250 - 2579230 - R 95 -12.5 -3.88703 | opp_overlap 2579231, overlap 2579228 2579231 GCGCATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAGATGCGCCT TERM 3356 2579231 - 2579249 + r 100 -16 -4.62069 | opp_overlap 2579231 2579230 2579228 CGCATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC TERM 3357 2579249 - 2579231 - R 93 -16 -2.92499 | opp_overlap 2579231, overlap 2579230 2579228 CGCATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC tnpA_3 2579789 - 2579331 - | transposase TERM 3358 2579902 - 2579920 + r 100 -16 -4.18018 | opp_overlap 2579892 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 3359 2579956 - 2579939 - R 100 -12.7 -5.4251 | overlap 2579950 TCCATAGACAAAAAA GCGCAGG AGAA CCTGCGC CAGAAGAGAGAGTAA maeB 2582258 - 2579979 - | malic enzyme TERM 3360 2580413 - 2580393 - G 83 -10.4 -3.92324 | CGGCTCAATACCAAA GCGGCGAA CGGTT TCCGCCGC CATTACGGCGATCTC TERM 3361 2581397 - 2581429 + g 75 -6.2 -4.65078 | gap 1, opp_overlap 2581383 TTTCCGGTTCCGGGT TGGCCAGCGC-CAGA ATCA TTGGCGCGCGGGCCA TTTTCTTCACCATCT TERM 3362 2581602 - 2581620 + g 74 -7.4 -4.18018 | AACGCCCTTAGAGTC GCACACCA CGA TGTTGTGC TTTTGCATCCCCAAC talA 2582530 - 2583480 + | transaldolase A TERM 3363 2585481 - 2585471 - g 72 -2.4 -4.87273 | AATATTGTAGAAAAA GCCC GCC GGGT GCTAAACATCAAAGG tktB 2583500 - 2585500 + | transketolase TERM 3364 2585522 - 2585562 + T 90 -14.2 -3.40371 | opp_overlap 2585516 2585520 2585518 2585522, overlap 2585523 CGTTAGCAACACAGA CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA TTACTTCGTAGACTC TERM 3365 2585562 - 2585522 - T 79 -12 -3.12449 | opp_overlap 2585522 2585523, overlap 2585516 2585520 2585518 CGTTAGCAACACAGA CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA TTACTTCGTAGACTC TERM 3366 2585523 - 2585561 + T 100 -17.7 -2.63901 | opp_overlap 2585516 2585522 2585520 2585518, overlap 2585522 GTTAGCAACACAGAC TTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAA ATTACTTCGTAGACT STM2475 2585793 - 2585563 - | putative cytoplasmic protein ypfG 2586964 - 2585921 - | putative periplasmic protein TERM 3367 2586172 - 2586186 + g 100 -7 -5.47218 | opp_overlap 2586152 GCCGCAAACGTACGG CGCGCG AGA CGAGCG TTTTTTTGCGTGAAA TERM 3368 2586794 - 2586744 - G 85 -12.5 -3.53012 | gap 2, opp_overlap 2586744 2586746 TCGGGCGGCGCCAAA CCGCCGCGGTCGATACGCAGTACCG CAT CGGTAC-GCGCCCCGGC-GCTGCGG CTTAATGTCATCACC TERM 3369 2587070 - 2587081 + r 95 -3 -5.81412 | opp_overlap 2587070 TCTTTTTTGTGTAAA GAAA TATA TTTC TTTTTTTTCAGTCCA yffH 2587664 - 2587089 - | putative pyrophosphohydrolase TERM 3370 2588043 - 2588019 - g 88 -11.5 -4.21922 | opp_overlap 2588017 2588019 GGATTCAAAATCAAA TTGATGCCGGA TAT CCCAGCATCAA TCTTCTGGTGATAAA STM2478 2587868 - 2589166 + | hypothetical protein TERM 3371 2589475 - 2589463 - T 72 -9.1 -3.5393 | ATCAGGCCTGTTAAA CGTCG CCC CGACG GGAAAATGTTTATCG aegA 2591576 - 2589615 - | putative oxidoreductase Fe-S binding subunit TERM 3372 2589955 - 2589945 - G 71 -4.6 -4.65895 | overlap 2589953 CCGCGTACGCAAAAA GCGA ATA CCGC TGGCGCGCCCGTGCG TERM 3373 2590014 - 2590032 + g 74 -4.5 -4.69464 | GTTAAATTCAAAGTT CGCGC CCTCTTCCC GCGCG TTTTTCACCTCTTTT TERM 3374 2591780 - 2591802 + G 100 -6.2 -5.48787 | opp_overlap 2591775 2591774 ACGGTTAAACGCCCG GTCTCGGCCA GTC TGGCTAAGGC TTTTTTCTATATTGT TERM 3375 2592061 - 2592051 - g 78 -6.8 -4.58395 | overlap 2592052 2592053 CGCAGGCGGTAAAAA CTCG CTA CGAG CGCCTGCACGCCAAC TERM 3376 2592844 - 2592815 - g 75 -5.7 -4.60889 | overlap 2592817 AATCAGGCGCAAAAA CACTTCCAGCAAC TTTT GTTAATGGAAGAG CGCGCGACGATTGCC TERM 3377 2593263 - 2593230 - g 76 -10.9 -3.66874 | opp_overlap 2593221 CCAACGCGAGCGAAA TCGCCGTGAGCTGCG TCAC CGCGCCTGACGGCGA TCATACCGTTTATAT narQ 2591762 - 2593462 + | nitrate/nitrite sensor protein NarQ TERM 3378 2593514 - 2593467 - f 71 -7.7 -4.01381 | opp_overlap 2593484, overlap 2593474 2593475 AGTTAACGTAAAGAA CG-GCAAATCGCCGGAAGGCCAG ATGT CAGGCTTTCCGGCG-TTGGCACA AAAAGTATGCTGTAA TERM 3379 2593507 - 2593474 - f 93 -12.3 -3.74238 | opp_overlap 2593484, overlap 2593467 2593475 GTAAAGAACGGCAAA TCGCCGGAAGGCCAG ATGT CAGGCTTTCCGGCGT TGGCACAAAAAGTAT TERM 3380 2593506 - 2593475 - f 93 -15.8 -2.8382 | opp_overlap 2593484, overlap 2593474 2593467 TAAAGAACGGCAAAT CGCCGGAAGGCCAG ATGT CAGGCTTTCCGGCG TTGGCACAAAAAGTA TERM 3381 2595860 - 2595846 - g 70 -5.6 -4.45945 | ATTGACCAACGAAAA GCGCAG GCG CTGGGC GTATCGATTGACGAT acrD 2593647 - 2596760 + | aminoglycoside/multidrug efflux system TERM 3382 2596796 - 2596826 + F 70 -9.1 -3.34962 | opp_overlap 2596801, overlap 2596801 GAGGTGTCGGGCACA AAAAAGGCGACTT TCGTT GAGTCGCCTTTTC TTATCCCCTATGGGA TERM 3383 2596801 - 2596821 + F 93 -9 -4.78237 | opp_overlap 2596801, overlap 2596796 GTCGGGCACAAAAAA GGCGACTT TCGTT GAGTCGCC TTTTCTTATCCCCTA TERM 3384 2596821 - 2596801 - f 100 -8.3 -5.24129 | opp_overlap 2596796 2596801 GTCGGGCACAAAAAA GGCGACT TTCGTTG AGTCGCC TTTTCTTATCCCCTA TERM 3385 2596848 - 2596860 + F 79 -7.7 -4.41348 | CCTATGGGAGCGCGG TGCCT TCC AGGCA TTTATTTACGAAGCA yffB 2597334 - 2597690 + | hypothetical protein TERM 3386 2597826 - 2597842 + G 73 -5.1 -4.59773 | ATTGAGCATATGGAT TTTGGCG ACA CGCAAAA TTTTTGGGCATGGCG TERM 3387 2598664 - 2598676 + G 85 -9.1 -4.38154 | overlap 2598650 TGACGACGGGCGGTA CGTCC GAC GGACG TTTTATCGCCCGTAT dapE 2597694 - 2598821 + | succinyl-diaminopimelate desuccinylase STM2484 2598849 - 2599049 + | hypothetical protein TERM 3388 2599094 - 2599051 - T 72 -10.3 -2.88433 | opp_overlap 2599077, overlap 2599050 2599060 AGCCGAAAAAGTAAC CGGATATCATGCCGGACAG GTATCG CTATCCGGCATGGTCCCCA CCGCCGGGCATTACG TERM 3389 2599085 - 2599060 - T 73 -11.2 -2.64973 | opp_overlap 2599077, overlap 2599051 2599050 AGTAACCGGATATCA TGCCGGACAG GTATCG CTATCCGGCA TGGTCCCCACCGCCG ypfI 2601094 - 2599076 - | putative acetyltransferase TERM 3390 2599598 - 2599571 - G 71 -7.7 -3.99324 | overlap 2599590 2599591 CCGTACCAGTACAAA GCCGCAGCGTT GCCAGA AACGCCACAGC TTCGGCGTATAGCCG TERM 3391 2599625 - 2599590 - G 71 -8.3 -3.86015 | gap 1, overlap 2599571 2599591 CAGCGTTGCCAGAAA CGCCA-CAGCTTCGGC GTATA GCCGAAGCTGACGGAA AGATAATCACACTGC STM2486 2601973 - 2601110 - | putative inner membrane protein TERM 3392 2602091 - 2602070 - R 74 -11.5 -2.90054 | overlap 2602065 GAGGAAAGGATGATA CCGGAGAGC GGTT GCCCCCCGG TCAGAAGCGGAATTA purC 2602817 - 2602104 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3393 2602984 - 2602965 - R 100 -11.4 -5.31275 | opp_overlap 2602963 2602965 TCTTATCAGAAAAAA GGGCCGGA TTGC TCCAGCCC TGTTAAATTACTTGT nlpB 2604026 - 2602992 - | lipoprotein dapA 2604921 - 2604043 - | dihydrodipicolinate synthase gcvR 2605067 - 2605639 + | glycine cleavage system transcriptional repressor bcp 2605639 - 2606109 + | thioredoxin-dependent thiol peroxidase STM2492 2606509 - 2606156 - | putative glycerate kinase TERM 3394 2606313 - 2606287 - G 74 -7.2 -4.20696 | gap 1, opp_overlap 2606309 TGAGCAACCCTAAAA GCGCGGC-GCC CATTCC GCCTGCCGCGC CGGGAGCGTTAATCA TERM 3395 2606587 - 2606568 - R 100 -9.3 -5.18726 | TTCCGACAATAAAAA TGCCGCA ACACGG TGCGGCA TTAAAAAAAAGAGCG perM 2607763 - 2606696 - | putative permease TERM 3396 2608313 - 2608328 + G 71 -4.6 -4.65895 | TTTGGCGGCAATGTG GTGCTG CACT CGGCGC TTTTTCGCTACGCGG TERM 3397 2608442 - 2608432 - g 83 -8.2 -4.43681 | opp_overlap 2608433, overlap 2608433 GATGGAAGATCAAAA GCGC AGC GCGC CGCTTACCTGGGTGG STM2494 2607971 - 2609434 + | hypothetical protein yfgD 2609474 - 2609833 + | putative arsenate reductase TERM 3398 2609842 - 2609857 + T 79 -11.8 -3.12668 | overlap 2609834 CGGTTAACCGTTGAA CGCCGC CGTC GCGGCG TATTACAGTTTCAGG yfgE 2610585 - 2609860 - | DNA replication initiation factor TERM 3399 2610009 - 2609989 - G 74 -4.6 -4.7254 | ACGTTTGAGTAAAAA CCGCCCGA CATCT TCCGGCAG TTCAAACCCCCGTAA TERM 3400 2610648 - 2610628 - R 100 -18.3 -3.58726 | opp_overlap 2610645 TCCCGTGAGATAGAA CCGGGCAGC ATC GCTGCCCGG CAACCCGTTACTGAT TERM 3401 2610660 - 2610680 + r 93 -11.9 -3.65902 | CCGGCAACCCGTTAC TGATGCGGG GGC TCCGCATCA TTTGCCTCCAGTACC uraA 2611945 - 2610656 - | uracil transporter TERM 3402 2611605 - 2611615 + g 74 -2.4 -5.03314 | ATCACATCCAGCCAG CCGG TGC CCGC TTTTTTAACGATGAA TERM 3403 2611678 - 2611668 - G 72 -2.4 -4.84311 | CCGCACATAATAAAA CCGC CCA GCGC CACTTCATAACCCAG TERM 3404 2611991 - 2612019 + r 74 -10.4 -3.13412 | opp_overlap 2611996, overlap 2611996 GTGGTTTTATTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTTA ATTATTTATTCACTT TERM 3405 2611996 - 2612014 + r 93 -10.3 -4.65969 | opp_overlap 2611996, overlap 2611991 TTTATTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTTAATTATTTATT TERM 3406 2612014 - 2611996 - R 100 -11 -5.81412 | opp_overlap 2611996 2611991 TTTATTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTTAATTATTTATT upp 2612659 - 2612033 - | uracil phosphoribosyltransferase TERM 3407 2612985 - 2612965 - H 100 -4.6 -5.82316 | gap 1, overlap 2612966 2612980 ACCATGCAAAAAAAA TCGCCC-GG ATAA CCAGGGCGC AGACCACGCTCGCAA TERM 3408 2612984 - 2612966 - H 76 -8.1 -4.07763 | gap 1, overlap 2612965 2612980 CCATGCAAAAAAAAT CGCCC-GG ATAA CCAGGGCG CAGACCACGCTCGCA TERM 3409 2613070 - 2613057 - H 79 -2.3 -5.46657 | TACCGCAAGAAAAAA CGTGG GGAA CCAGG CAGTGACCGATAAGA purM 2613058 - 2614110 + | phosphoribosylaminoimidazole synthetase TERM 3410 2614236 - 2614220 - g 70 -9.4 -3.73914 | overlap 2614221 AGTATTCAGCAATAA GGCCGA CGCGT TCGGCC TTGAACGCGCCAGAG TERM 3411 2614267 - 2614254 - g 71 -9.5 -3.494 | GAACGCGCCAGAGAA GCCGG TATT CCGGC GCAAGCGCTGACTGC purN 2614110 - 2614748 + | phosphoribosylglycinamide formyltransferase TERM 3412 2616337 - 2616327 - g 91 -6.8 -5.27477 | ACTTCAACGAAAAAA CAGC GCG GCTG TATACCGATTATTCG ppk 2614937 - 2617003 + | polyphosphate kinase TERM 3413 2617160 - 2617134 - g 83 -10.1 -4.07687 | ATCGGGCGCTTAAAA CAGCGCGTCCA TCTGG CGGACGGGCTG GGCGCAGATAACAAA TERM 3414 2617504 - 2617535 + G 81 -12.4 -3.53343 | gap 1, overlap 2617508 2617510 TGGTTGAAAGCCGTC GTATGGGCTGCGTGA GCT TCGCGCAGCTC-TAC TTTCCCGGCGGCGTT TERM 3415 2617508 - 2617532 + G 86 -14.3 -2.90496 | overlap 2617504 2617510 TGAAAGCCGTCGTAT GGGCTGCGTGA GCT TCGCGCAGCTC TACTTTCCCGGCGGC TERM 3416 2617510 - 2617530 + G 81 -13.3 -3.00525 | overlap 2617508 2617504 AAAGCCGTCGTATGG GCTGCGTGA GCT TCGCGCAGC TCTACTTTCCCGGCG ppx 2617008 - 2618549 + | exopolyphosphatase TERM 3417 2618557 - 2618583 + T 100 -18 -3.78022 | opp_overlap 2618552 2618551, overlap 2618559 CCGCGTAAATTGTGA GCCAGACGCCGC GCC GCGGCGTCTGTC TTTACTGAATCTCAG TERM 3418 2618559 - 2618581 + T 100 -19.2 -3.47361 | opp_overlap 2618552 2618551, overlap 2618557 GCGTAAATTGTGAGC CAGACGCCGC GCC GCGGCGTCTG TCTTTACTGAATCTC STM2503 2620798 - 2618585 - | putative diguanylate cyclase TERM 3419 2620948 - 2620921 - RH 70 -2.1 -4.96388 | opp_overlap 2620916, overlap 2620916 AATTATTAAACAAAA GTAACATTTGA TTTAAG TCAATTATTAC CTTTCTCCTGCAGCC STM2505 2621363 - 2621103 - | putative inner membrane protein STM2506 2621211 - 2621402 + | putative inner membrane protein TERM 3420 2621998 - 2621980 - g 71 -4.6 -4.58085 | overlap 2621983 ATATTGAGAAAGAAA TTATCGAT TTT ATCGATCA GGAATATAACACTAA STM2508 2621943 - 2622272 + | putative cytoplasmic protein STM2509 2622648 - 2622292 - | putative transposase TERM 3421 2622737 - 2622756 + r 81 -12.2 -3.1996 | opp_overlap 2622737 GCACATAAATAAAAA CCCTCTGT AAAA ACAGAGGG TTAAATTCACCTTTA TERM 3422 2622756 - 2622737 - R 100 -12.2 -5.42975 | opp_overlap 2622737 GCACATAAATAAAAA CCCTCTGT AAAA ACAGAGGG TTAAATTCACCTTTA guaA 2624382 - 2622805 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3423 2624167 - 2624182 + g 74 -4.6 -4.69053 | TTCAAAGACATACTG CAGCGC GCGC GGGCTG TTTTCTTCGGTGGTG TERM 3424 2624445 - 2624422 - R 100 -13.9 -4.56113 | AACAGATTAAATAAA TCGCCCGAC ACGAAG GTCGGGCGA AGAAAATCAGGAGCC guaB 2625918 - 2624452 - | inositol-5-monophosphate dehydrogenase TERM 3425 2624918 - 2624894 - G 71 -8.5 -3.85817 | opp_overlap 2624916, overlap 2624916 ATGTCGCCGGAGAAA CGGATACCGCC GTC AGCGATAACCG GAATACCGGTACCTT TERM 3426 2627270 - 2627300 + G 81 -11.9 -3.53012 | gap 1 CTGGAAGCGGTCAGC CCGT-TAGCCACGC TGGC GCGCGGCTATACGG TTTCGACGACAACGG xseA 2626079 - 2627428 + | exodeoxyribonuclease VII large subunit TERM 3427 2627555 - 2627577 + T 80 -6.9 -4.57474 | gap 1, opp_overlap 2627556, overlap 2627556 GTCATTCGCCTCAAA ACGGGCAGGG AACA CCC-GCCCGG TTTTGTCTAACTTAC TERM 3428 2627576 - 2627556 - T 95 -11.8 -4.08216 | opp_overlap 2627555 2627556 TCATTCGCCTCAAAA CGGGCAGG GAACA CCCGCCCG GTTTTGTCTAACTTA TERM 3429 2627556 - 2627576 + T 77 -10.4 -3.33761 | gap 1, opp_overlap 2627556, overlap 2627555 TCATTCGCCTCAAAA CGGGCAGGG AACA CCC-GCCCG GTTTTGTCTAACTTA shdA 2633708 - 2627589 - | AIDA autotransporter-like protein TERM 3430 2631686 - 2631700 + g 76 -10 -3.90318 | GCGTGCCCTGGCTCA GCGCAA GCG TTGCGC TTTCTGCAATCGTCA TERM 3431 2631734 - 2631765 + g 78 -13.8 -2.67244 | gap 1, overlap 2631716 2631714 2631732 2631745 CGCCAGTGCCGAGCG CGGCGGCGTCTTTGG CGG CCAGA-ATGCCGCCG TCAATTTCAGTATCG TERM 3432 2632496 - 2632507 + g 74 -2.2 -5.03314 | overlap 2632490 TCTGGACAATGTTGC CGGT CAGC ATCG TTTTTTCGGCCTGAA TERM 3433 2633546 - 2633585 + g 82 -5.6 -5.05116 | gap 2, opp_overlap 2633543 2633542 2633570, overlap 2633550 2633568 2633570 GGCTGAAAAATCCGA GCGCCGCAGCCACGGCGC AAGCCA GCGCCGCG-C-GCGTTGC TTTTATTATTTGTCC TERM 3434 2633638 - 2633651 + g 71 -8.1 -3.8822 | GAATGGGTTTCACTC GCGCA TACT TGCGC TTTAACTTTGCTGTG ratB 2641709 - 2634402 - | putative outer membrane protein TERM 3435 2635494 - 2635508 + g 70 -3.4 -4.74706 | opp_overlap 2635473 2635494 GTATTCCGCATCACA GCCGGT TGC GCCCGC TTTTTCAGTGTTCGC TERM 3436 2637356 - 2637406 + g 81 -11.7 -3.56643 | opp_overlap 2637354 2637355 GCGTAGCGCTAAACT CGCTGGCCAGCAGCGGACGCCTG TACGC CACGCCGCTGCTGTCGGTCAGCG TTTCCGCCATATGGC TERM 3437 2637510 - 2637526 + g 86 -10.8 -4.07568 | overlap 2637521 GCCGTTGTGTTCTAT CGCCGC CGTCA GCGGCG TTTTAAAGCCCGCGC TERM 3438 2638480 - 2638495 + g 73 -10.4 -3.33798 | overlap 2638478 GCCGAGACGATGCCG TCGCCG CTAC CGGCGA TATGTTTCTCCCCCT TERM 3439 2638546 - 2638577 + g 91 -12.2 -4.15854 | opp_overlap 2638546 2638545 CGGCTTAACACGAAC GGCGCTTGCGGCAG CGGA TTGCCGCTGGCGTC TTTTACCGTCACTTT TERM 3440 2638599 - 2638611 + g 71 -4.7 -4.66833 | CGTCACTTTAAGCTG GAGCG TAT CGCCC TTTTTCACCTTCACC TERM 3441 2638996 - 2639024 + g 72 -12.3 -2.73124 | overlap 2638995 2639013 TCCTGCTCCTGGGTA CGGGTGGCGGCAG TCG CTTCCGCCGCCAG CTTTGGCCGCTGGAA TERM 3442 2639822 - 2639840 + g 80 -9.5 -3.9777 | TATCCTGCGCGGCTT CGTCCGC CAGCA GCGGGCG TTTGTAGATATTGCC TERM 3443 2640671 - 2640691 + g 93 -16.9 -2.90763 | opp_overlap 2640658 AGGTGTAGCTTGCGC CGTCCACCG TGG CGGTGGACG TCTCTGCCATATGAC ratA 2647472 - 2641875 - | putative outer membrane protein TERM 3444 2643513 - 2643531 + g 71 -4.5 -4.66833 | overlap 2643515 GGTAGTGGTGATGAG TAGCGGG ATCGA CTCGCTG TTTTTCGCCTTCACC TERM 3445 2643641 - 2643657 + g 71 -5.8 -4.36914 | TTTGATACTGCCAGG CAGTGC TGGTC GCGCTG TTTTCTGACCGACGC TERM 3446 2645757 - 2645785 + g 77 -11 -3.56378 | gap 1, overlap 2645738 2645755 2645748 GTCCGGCATCACGAT GCGG-ATGGGCGT TTCG ACGCCCAGGCCGC TGTTATGTTTTAACG TERM 3447 2646665 - 2646687 + g 89 -13.4 -3.61398 | TCGTGAGCTCGGTAT CGCCAACGCG AAC CGGGTTGGCG TTATTGACCACACCC TERM 3448 2646755 - 2646770 + g 76 -10.4 -3.73953 | GCGCGTTGCCTTCGG GCGTGC CGTC GCACGC TTTGGTGGAGATGGT TERM 3449 2647547 - 2647513 - R 100 -15.9 -3.17075 | TCTGTCGTAATTCAA CCCACTTTGCTTAGC GCGCG GCTAAGCAAAGTGCG CGGAAAATACCACTC TERM 3450 2647578 - 2647555 - R 100 -15.4 -4.0896 | opp_overlap 2647555 2647557 AAAGTGCGCGGAAAA TACCACTCCC CGCG GGGAGTGGTA TGTTGAGGACAACTT TERM 3451 2647555 - 2647578 + r 93 -15.4 -3.02043 | opp_overlap 2647555, overlap 2647557 AAAGTGCGCGGAAAA TACCACTCCC CGCG GGGAGTGGTA TGTTGAGGACAACTT TERM 3452 2647557 - 2647576 + r 85 -13.6 -3.06696 | opp_overlap 2647555, overlap 2647555 AGTGCGCGGAAAATA CCACTCCC CGCG GGGAGTGG TATGTTGAGGACAAC sinI 2648551 - 2647592 - | putative outer membrane protein sinH 2650801 - 2648609 - | intimin-like protein TERM 3453 2649117 - 2649151 + g 84 -3.4 -5.38249 | overlap 2649121 ATAAACACGCAGGGG GTTTCCGTGGTGCAGG GCG TCTGGGCCAGGGTGAC TTTTTTATCATTGCT TERM 3454 2650630 - 2650646 + g 83 -8.1 -4.50841 | overlap 2650624 CAGCGCCCTGTTCTT TAAAGGA CTT TCCTTTA TTTTCCTGTTCTTCT TERM 3455 2651117 - 2651144 + r 72 -4.8 -4.71426 | gap 1, opp_overlap 2651104, overlap 2651120 AAGACGTCGGCGCCT CTGCTCTGCGGCG CAA CGTCG-ACAGCGG TTTTATTGATCGGAA yfgJ 2651368 - 2651147 - | putative cytoplasmic protein TERM 3456 2651435 - 2651408 - R 79 -10.6 -3.60296 | gap 1, opp_overlap 2651403 TACTTTTACTTGAAA GGCCTGA-TAGCG CAG CGCTTGTCAGGCC TGGAATATTACTGAA engA 2652929 - 2651457 - | GTP-binding protein EngA TERM 3457 2653026 - 2652996 - R 74 -11.2 -2.93708 | opp_overlap 2653001, overlap 2653001 CGTTGTTAAAAACAG GAAAACGGCCCCTA CAC CAGGAGCCGTTTTT TAAAACACACAACCG TERM 3458 2653001 - 2653021 + r 91 -8.2 -5.00616 | opp_overlap 2652996 2653001 TTAAAAACAGGAAAA CGGCCCCT ACACC AGGAGCCG TTTTTTAAAACACAC TERM 3459 2653021 - 2653001 - R 95 -11.1 -4.60746 | opp_overlap 2653001, overlap 2652996 TTAAAAACAGGAAAA CGGCCCCTA CAC CAGGAGCCG TTTTTTAAAACACAC yfgL 2654226 - 2653048 - | outer membrane protein assembly complex subunit YfgL yfgM 2654857 - 2654237 - | putative inner membrane protein TERM 3460 2654318 - 2654332 + g 79 -2.7 -5.25803 | overlap 2654318 2654319 GACGCCCGCTTCCCA TGCGC TGCGC GCGCC TTTTTTATCACCCTT TERM 3461 2654596 - 2654606 + g 91 -6.8 -5.18726 | opp_overlap 2654568 CCATAGACGCCAGCG CACC ATA GGTG TTTTTATTCTCAGCC TERM 3462 2654932 - 2654884 - R 76 -8.1 -4.1822 | gap 1, opp_overlap 2654913 2654924 CCTTAGCCCAATAAA GTGCGCAAATGCGCGGCGACGC TGTCCT GCGCCACTGC-CGTTTGCTCAC CGGAGCGCAAATCCT hisS 2656145 - 2654871 - | histidyl-tRNA synthetase TERM 3463 2656037 - 2656053 + g 70 -3 -4.71061 | gap 1 GGATTTCACTGTAAC CGTAGCT GCCG AGC-ACG TTTTTGAGTGTGCCT TERM 3464 2656109 - 2656134 + g 84 -6.1 -5.03747 | opp_overlap 2656109 CGCCAGGCAGATAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3465 2656218 - 2656172 - R 80 -5.8 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAGCGCTTCCCCG AACGAA CCGGG-AGCCATGCGGGTTCA ATCATACACGGGAAG TERM 3466 2656247 - 2656227 - R 82 -13.3 -3.00298 | opp_overlap 2656221 GGGTTCAATCATACA CGGGAAGCG CGC CGCTTCCCA TCACGTTCTTATTTT ispG 2657374 - 2656256 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase yfgA 2658405 - 2657401 - | hypothetical protein TERM 3467 2657794 - 2657816 + g 86 -12.6 -3.64703 | overlap 2657806 2657807 TACCGTATTTTGCGT CGCCGCCGCC GTT GGCGCTGGCG TTTGCGTCGCCGCCG TERM 3468 2658309 - 2658297 - G 70 -9.1 -3.66095 | AAACCTTCAGGCAAA GTCGC TCA GCGAC AGCCTGCTGGCTGAG yfgB 2659863 - 2658697 - | hypothetical protein TERM 3469 2659953 - 2659921 - R 76 -4.1 -5.04249 | gap 2, overlap 2659923 GGTTGAAAAAAGAAA CGCCCC-GG-TAAGC TTACT GCTCGTCCGGGGGCG CTGCATTGTACAAAT ndk 2660501 - 2660070 - | nucleoside diphosphate kinase STM2527 2661485 - 2660622 - | putative polyferredoxin TERM 3470 2661405 - 2661375 - G 100 -13.3 -4.18018 | overlap 2661395 CTGCGCCAGCGAAAA CGCCTGCGCCG GACAAACAT CGGCGCAAGCG CGGCAGGAAGAAAAA TERM 3471 2661461 - 2661426 - G 85 -9.1 -4.43037 | gap 2 GGAAGAAAAACGAAA GCGAC-GACG-GACGCA GGCC TGCGTCACGTCTACCGC CGGATCGATCGTCAG STM2528 2662294 - 2661485 - | putative dimethylsulfoxide reductase TERM 3472 2661966 - 2661944 - G 79 -11.2 -3.62275 | opp_overlap 2661951 ATCCACCAGCCCAAA CGCTGCCGCC AGC GCCAGCAGCG GCTGCCAGCCTGGCT TERM 3473 2662176 - 2662154 - G 76 -9.1 -3.9712 | gap 1 GCAGGCCAGTACAAA CGCC-CCCGC CATC GCGGGAAGCG CGCCGCGTGCAGGCA STM2529 2662916 - 2662287 - | putative anaerobic dimethylsulfoxide reductase STM2530 2665318 - 2662913 - | putative anaerobic dimethylsulfoxide reductase TERM 3474 2664802 - 2664779 - G 100 -13.8 -4.08767 | TTTATCGCCGGAAAA GGTGCCGCCG GAAA CGGCGGTACC AACATGAACATAGCG TERM 3475 2665262 - 2665275 + g 86 -3.8 -5.36364 | overlap 2665243 AATAGCGGGCTGTTC GCCA TTTCCC TGGC TTTTTATATTTTTCA pbpC 2667762 - 2665447 - | penicillin-binding protein 1C TERM 3476 2665557 - 2665542 - G 78 -6.1 -4.70887 | TGAGTAATAAAGAAA GGCGA TTATTT TCGCC ATTAACAGGTTCGCC TERM 3477 2665610 - 2665582 - G 87 -8.1 -4.65895 | TTCGCCATTTAAAAA CCACCAGCGAC GCCCTTT GCCGCCGGTAG TCGAGACGGGCAGCG TERM 3478 2667019 - 2666991 - G 73 -5.1 -4.57569 | TCATTCGGGCAAAAA GCGGCGCCAGTTG CGG CATTTGACGCGGC GCCAGCCAGACCGGT TERM 3479 2667720 - 2667708 - G 100 -6.2 -5.50723 | opp_overlap 2667712, overlap 2667709 2667710 CCAGGAAAATAAAAA GCGG CGCGC CCGC CAGCCACAGCCAGCG STM2532 2672697 - 2667763 - | putative inner membrane lipoprotein TERM 3480 2668038 - 2668048 + g 70 -6.8 -4.11216 | overlap 2668018 2668017 TGGCGCTGCTGTCAG CCAG ATT CTGG TTTTCCAGCTCCAGC TERM 3481 2670731 - 2670741 + g 78 -2.4 -5.252 | opp_overlap 2670731 AGCCGCACCTGTAAA CCGG ACA CCGC TTTTTTCTCGCCCTG TERM 3482 2671225 - 2671235 + g 80 -4.6 -5.02074 | overlap 2671218 CACCTCATCCGCAGG CGCC AGC GGTG TTTTTTGCGCCGTCA TERM 3483 2672541 - 2672551 + g 75 -6.8 -4.45083 | overlap 2672533 CTTTGCCCTGGCTTT GCTG CGC CAGC TTTTGTAGCTGTGCC TERM 3484 2673029 - 2673058 + G 85 -4.9 -5.27779 | opp_overlap 2673011 2673008 2673031, overlap 2673018 2673031 2673032 GATATGGCGGGCGAA TATCGCGCCGG ACATATTC CCGGTGCGCTG TTTTTTGATATTGAA TERM 3485 2673426 - 2673441 + G 77 -8.2 -4.11216 | opp_overlap 2673409 2673418 CGCAAATCGTTGACG CGCGTC CGGC GGCGCG TTTTAACGCTCAGGC sseA 2672906 - 2673748 + | 3-mercaptopyruvate sulfurtransferase STM2534 2673995 - 2674663 + | putative cytoplasmic protein TERM 3486 2674791 - 2674751 - T 90 -15 -2.71263 | gap 1, opp_overlap 2674764, overlap 2674764 AATTCTGTTTAAGCA GGCCACAAAAAAACCGCTC AATT GAGCGGTTTTTTTGTG-CT GGTCCGGTTCGCGGC TERM 3487 2674764 - 2674779 + T 100 -10.4 -5.67967 | opp_overlap 2674751 2674764 CAGGCCACAAAAAAA CCGCTC AATT GAGCGG TTTTTTTGTGCTGGT TERM 3488 2674779 - 2674764 - T 100 -10.4 -5.626 | opp_overlap 2674764, overlap 2674751 CAGGCCACAAAAAAA CCGCTC AATT GAGCGG TTTTTTTGTGCTGGT TERM 3489 2674990 - 2675029 + T 76 -12.1 -2.57211 | opp_overlap 2674988 2674985, overlap 2674989 2675017 AGAGGATAACCCATG GCCGTAAGCGCAGGCAC ACCGTA GTGCCTGCTATCACGGC ATTATCGCCAGCGGT TERM 3490 2675017 - 2675059 + T 78 -12.1 -3.01712 | gap 1, opp_overlap 2674988 2674985, overlap 2674990 2674989 2675038 2675042 GGCACACCGTAGTGC CTGCTATCACGGCATTATCG CCAG CGGTGCTGCCGTGAT-GCGG TCTTCGCAAGGACCG TERM 3491 2675225 - 2675200 - T 70 -10.3 -2.55722 | opp_overlap 2675200 2675204 AGAGCAGGTAAGCCA GGAGGCCGCCC TGTT GGGCGGCTTTC TTTTCTTCAGATGAT TERM 3492 2675200 - 2675225 + T 100 -14.7 -4.66318 | opp_overlap 2675200, overlap 2675204 AGAGCAGGTAAGCCA GGAGGCCGCCC TGTT GGGCGGCTTTC TTTTCTTCAGATGAT TERM 3493 2675204 - 2675221 + T 100 -14.1 -4.87892 | opp_overlap 2675200, overlap 2675200 CAGGTAAGCCAGGAG GCCGCCC TGTT GGGCGGC TTTCTTTTCTTCAGA sseB 2676017 - 2675232 - | enhanced serine sensitivity protein SseB TERM 3494 2675810 - 2675831 + g 75 -5.9 -4.60487 | gap 1, opp_overlap 2675813, overlap 2675809 2675814 GAGAAGTAAAGAAGG GAATGACGGT CGT GCCGTC-TTC TTTTTCCCAGTGCTG TERM 3495 2675814 - 2675828 + g 79 -7.8 -4.41633 | opp_overlap 2675813, overlap 2675809 2675810 AGTAAAGAAGGGAAT GACGGT CGT GCCGTC TTCTTTTTCCCAGTG TERM 3496 2676061 - 2676049 - R 70 -9.1 -3.30124 | opp_overlap 2676060 TTGTAGGCCTGATAA GACGC ACG GCGTC GCCATCAGGCAAAAT TERM 3497 2676060 - 2676088 + r 77 -10.9 -3.17075 | opp_overlap 2676049 2676076 2676077 ATAAGACGCACGGCG TCGCCATCAGGCA AAA TGCCGGGTGGCGC TTCGCTTACCCGGCC TERM 3498 2676103 - 2676076 - R 76 -7.6 -4.21194 | gap 1, opp_overlap 2676060, overlap 2676077 CGCCATCAGGCAAAA TGCCGGGT-GGCG CTT CGCTTACCCGGCC TACAAAAACACCGTT TERM 3499 2676102 - 2676077 - R 77 -11.1 -3.12395 | gap 1, opp_overlap 2676060, overlap 2676076 GCCATCAGGCAAAAT GCCGGGT-GGCG CTT CGCTTACCCGGC CTACAAAAACACCGT pepB 2677401 - 2676118 - | aminopeptidase B TERM 3500 2676264 - 2676310 + g 70 -9.2 -3.73068 | opp_overlap 2676266, overlap 2676266 CAAAGTGCGACAAAA AACCCGCGGCGGTGCTTGCCCC GGC GGGATAAGCCGCGCTGCCGGTG TTGTTCAGTTCCGCA TERM 3501 2676308 - 2676266 - G 100 -9.6 -5.25803 | opp_overlap 2676266 2676264 AAGTGCGACAAAAAA CCCGCGGCGGTGCTTGCCCC GGC GGGATAAGCCGCGCTGCCGG TGTTGTTCAGTTCCG TERM 3502 2676266 - 2676308 + g 80 -11.8 -3.44686 | opp_overlap 2676266, overlap 2676264 AAGTGCGACAAAAAA CCCGCGGCGGTGCTTGCCCC GGC GGGATAAGCCGCGCTGCCGG TGTTGTTCAGTTCCG TERM 3503 2677028 - 2677057 + g 71 -10.7 -3.24747 | opp_overlap 2677005, overlap 2677047 GCGCGCTGCGCCAGT TGCTCCGGCCCAA GCTC TTCCGCCGGAGCA TTAATGGTGTCGCGC TERM 3504 2677417 - 2677452 + r 76 -7.4 -4.29396 | opp_overlap 2677424, overlap 2677419 2677420 2677424 TGTTATTTTCCTTAT TAGCAAACGGGCCGCC GTAG GGCAGCCCGTTAGATC TTTTGCTAAATGATT TERM 3505 2677419 - 2677450 + r 79 -10 -3.745 | opp_overlap 2677424, overlap 2677417 2677420 2677424 TTATTTTCCTTATTA GCAAACGGGCCGCC GTAG GGCAGCCCGTTAGA TCTTTTGCTAAATGA TERM 3506 2677420 - 2677449 + r 82 -13.5 -2.84218 | opp_overlap 2677424, overlap 2677419 2677417 2677424 TATTTTCCTTATTAG CAAACGGGCCGCC GTAG GGCAGCCCGTTAG ATCTTTTGCTAAATG TERM 3507 2677424 - 2677445 + r 86 -12.9 -3.29856 | opp_overlap 2677424, overlap 2677420 2677419 2677417 TTCCTTATTAGCAAA CGGGCCGCC GTAG GGCAGCCCG TTAGATCTTTTGCTA TERM 3508 2677445 - 2677424 - R 100 -15.1 -3.78775 | opp_overlap 2677420 2677419 2677417 2677424 TTCCTTATTAGCAAA CGGGCCGCC GTAG GGCAGCCCG TTAGATCTTTTGCTA yfhJ 2677848 - 2677648 - | hypothetical protein fdx 2678195 - 2677860 - | electron carrer protein hscA 2680047 - 2678197 - | chaperone protein HscA hscB 2680575 - 2680060 - | co-chaperone HscB TERM 3509 2680144 - 2680162 + g 100 -16 -3.33315 | GCGCACCGTATCCGC CGCCGCGT CCC ACGCGGCG TTGTCCAACTGTTCC TERM 3510 2680317 - 2680306 - G 71 -7.2 -3.96148 | opp_overlap 2680308 TTGTTCCATCAGAAA CGCG GTGT CGCG TACCGTATGTTGCTC TERM 3511 2680633 - 2680607 - R 79 -8.7 -4.30719 | gap 1, opp_overlap 2680607 GCCTGTCAGAACAAA CCCCACACGCAG GCGA CCACG-GTGGGG TTATACCTTCTTACT iscA 2681094 - 2680771 - | iron-sulfur cluster assembly protein nifU 2681509 - 2681123 - | scaffold protein nifS 2682751 - 2681537 - | cysteine desulfurase yfhP 2683425 - 2682931 - | DNA-binding transcriptional regulator IscR TERM 3512 2683448 - 2683460 + r 91 -6.2 -5.55769 | TTAACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA STM2545 2684316 - 2683585 - | putative rRNA methylase TERM 3513 2683995 - 2683983 - G 70 -3.3 -4.77036 | overlap 2683984 2683986 GCTCACGACCAAAAA CCAGC GCA ACCGG CGTATTTGCCGCTTC TERM 3514 2684453 - 2684481 + G 72 -12.3 -2.69964 | overlap 2684448 CATCCGATGCTGACC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATGTAATTGCCAA suhB 2684435 - 2685238 + | inositol monophosphatase TERM 3515 2685246 - 2685271 + F 95 -16.9 -2.74784 | overlap 2685243 2685242 AGCGCTAAGTCTCTT CGGCGGATGGG GCCA CTCATCCGCCG TGCCTTTTCAGGCGT TERM 3516 2685622 - 2685610 - g 70 -6.9 -4.09685 | opp_overlap 2685609 2685610 2685612 CGGCAGGCCGGAAAA CGCCG TCG CGACG GTGATTCATGTCCAT STM2547 2685383 - 2686261 + | putative hydrolase TERM 3517 2686519 - 2686543 + G 95 -11.3 -4.57569 | GGCGCGTGTTTGCCC CGTCCGCAGAG TTT CGCGGCGGACG TTTTTCCGACACTGA TERM 3518 2687325 - 2687301 - g 71 -4.2 -4.56597 | gap 1, overlap 2687303 GGTTTTCGCGAAAAA CCCGGCGAGCG TCTG CGCT-ACCGCG CCCTGCATAAGGTCA asrA 2686443 - 2687486 + | anaerobic sulfide reductase TERM 3519 2687541 - 2687517 - g 74 -8.6 -3.96148 | gap 1 TCCTGTCATGATAAA CCGCAGCACAG TTTG CTGC-CTGCGG CGTACCGCATCCTCA asrB 2687490 - 2688308 + | anaerobic sulfite reductase subunit B TERM 3520 2689068 - 2689056 - g 93 -9.1 -4.77438 | overlap 2689058 2689059 ACGCACCAGTAAAAA GACGC CGC GCGTC GGCAAGCTCTTCCTC asrC 2688319 - 2689332 + | anaerobic sulfide reductase STM2551 2690319 - 2689333 - | putative inner membrane protein STM2552 2690948 - 2690310 - | hypothetical protein TERM 3521 2691425 - 2691409 - g 100 -10.1 -5.00616 | opp_overlap 2691418, overlap 2691418 2691421 CCCGGCCTTAAAAAA CGCGCTA AAG CAGCGCG GTATCGCGCGTCCGC TERM 3522 2691788 - 2691805 + G 74 -10.5 -3.53012 | CTGCGACTGGAGGTG GCGCGGC TGGT GCTGCGC TTTCGAGAAAAAGGG TERM 3523 2692223 - 2692211 - g 71 -4.7 -4.57073 | opp_overlap 2692222 CAGGCGTTTCAAAAA GAGGG ATG CCCGC GCGGCGTAGCGCTGA csiE 2691074 - 2692351 + | stationary phase inducible protein CsiE hcaT 2693485 - 2692346 - | putative 3-phenylpropionic acid transporter TERM 3524 2692691 - 2692709 + g 70 -3 -4.72272 | CAGCAAGTCGCGGGC GCTAAACC GGC GGAATAGC TTTTTACTCAGGGCG TERM 3525 2693616 - 2693578 - R 93 -12.5 -3.69621 | gap 1, opp_overlap 2693579 2693580, overlap 2693579 AGGGAGAAGTTCAAA CGGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCA-CG TTATGGCGCATAAGT TERM 3526 2693616 - 2693579 - R 79 -12.7 -2.81291 | opp_overlap 2693579 2693580, overlap 2693578 GGGAGAAGTTCAAAC GGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCACG TTATGGCGCATAAGT TERM 3527 2693580 - 2693615 + r 76 -11.8 -2.57931 | opp_overlap 2693578 2693579, overlap 2693579 GGAGAAGTTCAAACG GCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCAC GTTATGGCGCATAAG glyA 2694934 - 2693681 - | serine hydroxymethyltransferase TERM 3528 2696424 - 2696410 - g 73 -5 -4.56133 | CGTGAATAACGAAAA CATTCA TTA CGAATG CTTCGGCCCGCATAA hmpA 2695259 - 2696449 + | nitric oxide dioxygenase TERM 3529 2696500 - 2696473 - f 85 -6.9 -5.01732 | opp_overlap 2696473 AATCCTCTGAAAAAA CGGGCGTTATC GTTAAG GCGAACGCCCG TTTTCCTCCCCGTTC TERM 3530 2696473 - 2696500 + F 74 -6.9 -4.2679 | opp_overlap 2696473 AATCCTCTGAAAAAA CGGGCGTTATC GTTAAG GCGAACGCCCG TTTTCCTCCCCGTTC TERM 3531 2697112 - 2697098 - g 70 -2.7 -4.7657 | opp_overlap 2697098, overlap 2697090 2697091 TAAAAAGGCGAAAAA GCCGC GTATT GCCGC TTTCTGGACGTGGGT TERM 3532 2697641 - 2697652 + G 78 -5.8 -4.82901 | opp_overlap 2697640 2697628, overlap 2697645 AACGCCGCAAAATAC CGCA CTGA TGCG TTTTTATGAGGCGCG cadC 2696631 - 2698175 + | DNA-binding transcriptional activator CadC TERM 3533 2698232 - 2698199 - f 73 -7.8 -4.02022 | gap 1, opp_overlap 2698199 2698204, overlap 2698204 CTGAACCATGACAAA TAAAAGCGAAAAGAT ATTAA AT-TTTTCGCTTTTA TTTTGTGAAAAACAT TERM 3534 2698199 - 2698232 + F 83 -9.1 -4.37092 | opp_overlap 2698199 2698204, overlap 2698204 CTGAACCATGACAAA TAAAAGCGAAAAGAT ATTA AATTTTTCGCTTTTA TTTTGTGAAAAACAT TERM 3535 2698204 - 2698227 + F 79 -4.6 -5.18371 | opp_overlap 2698204 2698199, overlap 2698199 CCATGACAAATAAAA GCGAAAAGAT ATTA AATTTTTCGC TTTTATTTTGTGAAA TERM 3536 2698227 - 2698204 - f 74 -3.3 -5.02323 | gap 1, opp_overlap 2698199 2698204, overlap 2698199 CCATGACAAATAAAA GCGAAAAGAT ATTAA AT-TTTTCGC TTTTATTTTGTGAAA TERM 3537 2698284 - 2698245 - f 93 -10.2 -4.57569 | opp_overlap 2698245 2698247, overlap 2698247 TTATTTTGTGAAAAA CATGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACATA TTCATTGCAAAGATA TERM 3538 2698245 - 2698284 + F 77 -10.2 -3.34013 | opp_overlap 2698245 2698247, overlap 2698247 TTATTTTGTGAAAAA CATGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACATA TTCATTGCAAAGATA TERM 3539 2698247 - 2698282 + F 81 -12.8 -3.23853 | opp_overlap 2698247 2698245, overlap 2698245 ATTTTGTGAAAAACA TGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACA TATTCATTGCAAAGA TERM 3540 2698282 - 2698247 - f 84 -10.6 -3.90316 | opp_overlap 2698245 2698247, overlap 2698245 ATTTTGTGAAAAACA TGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACA TATTCATTGCAAAGA TERM 3541 2698738 - 2698727 - g 83 -5.8 -4.8622 | opp_overlap 2698731 2698734 GCTGGCAACCAAAAA CCCT CAAC AGGG TGGCCCTATCGCTTA cadB 2698536 - 2699867 + | lysine/cadaverine antiporter cadA 2699950 - 2702094 + | lysine decarboxylase 1 TERM 3542 2702133 - 2702095 - f 76 -8.3 -4.14543 | gap 1, opp_overlap 2702103, overlap 2702092 2702103 GAAAATACGAAATAA GT-ACCAAAGGGAAGTGG CTTG CCACTTCCCTTTTTTCAC GCAGCAAGGAGACTT TERM 3543 2702103 - 2702124 + F 100 -14.5 -5.00616 | opp_overlap 2702095 2702092 2702103 GAAATAAGTACCAAA GGGAAGTGG CTTG CCACTTCCC TTTTTTCACGCAGCA TERM 3544 2702124 - 2702103 - f 100 -14.5 -3.90738 | opp_overlap 2702103, overlap 2702095 2702092 GAAATAAGTACCAAA GGGAAGTGG CTTG CCACTTCCC TTTTTTCACGCAGCA yjdL 2702150 - 2703610 + | putative di-/tripeptide transport protein glnB 2703997 - 2703659 - | nitrogen regulatory protein P-II 1 yfhA 2705411 - 2704074 - | putative transcriptional regulator yfhG 2706172 - 2705408 - | hypothetical protein TERM 3545 2705770 - 2705793 + g 73 -5.2 -4.65895 | gap 1, overlap 2705773 2705775 CCAGACGGGTCACTA TGGCG-CGCCG CTC CGGCGGCGTAA TTTTTGCATCCGCCA TERM 3546 2705775 - 2705790 + g 78 -11.8 -3.26405 | overlap 2705773 2705770 CGGGTCACTATGGCG CGCCGC TCCG GCGGCG TAATTTTTGCATCCG yfhK 2707616 - 2706174 - | putative sensor kinase TERM 3547 2707563 - 2707551 - G 76 -5.5 -4.78107 | CAGGATCAGCAAAAA GGCCA GCA TGACC AATTGTCGTAAAGAA TERM 3548 2707693 - 2707663 - R 100 -17 -2.89742 | opp_overlap 2707666 2707670, overlap 2707666 2707670 GGGAAGCGCCAGATA CAACAAAGCCGGGC TAA ACCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3549 2707666 - 2707690 + r 100 -15.8 -3.32844 | opp_overlap 2707666 2707663 2707670, overlap 2707670 AAGCGCCAGATACAA CAAAGCCGGG CTAAA CCCGGCTTTG TTATGGAATAAGGCG TERM 3550 2707690 - 2707666 - R 100 -16.5 -3.5947 | opp_overlap 2707666 2707670, overlap 2707663 2707670 AAGCGCCAGATACAA CAAAGCCGGGC TAA ACCCGGCTTTG TTATGGAATAAGGCG TERM 3551 2707670 - 2707686 + r 90 -10.8 -4.32177 | opp_overlap 2707666 2707663 2707670, overlap 2707666 GCCAGATACAACAAA GCCGGG CTAAA CCCGGC TTTGTTATGGAATAA TERM 3552 2707686 - 2707670 - R 95 -11.5 -4.42974 | opp_overlap 2707670 2707666, overlap 2707666 2707663 GCCAGATACAACAAA GCCGGGC TAA ACCCGGC TTTGTTATGGAATAA TERM 3553 2708060 - 2708079 + r 71 -7.8 -3.92324 | overlap 2708052 2708061 ACCTATCCCCCACTC ATGTCGGG ATTT CCCGACAC TTTAATCTTGCGGCA TERM 3554 2708061 - 2708078 + r 75 -11.3 -2.95073 | overlap 2708052 2708060 CCTATCCCCCACTCA TGTCGGG ATTT CCCGACA CTTTAATCTTGCGGC TERM 3555 2708234 - 2708216 - R 100 -11.7 -5.24129 | opp_overlap 2708216 GCCGTCTACAAAAAA GCCCCTC GTGAA GAGGGGC TTAATGGCTATCGGG TERM 3556 2708216 - 2708234 + r 79 -11.7 -3.20382 | opp_overlap 2708216 GCCGTCTACAAAAAA GCCCCTC GTGAA GAGGGGC TTAATGGCTATCGGG purG 2712141 - 2708254 - | phosphoribosylformylglycinamidine synthase STM2566 2712163 - 2712396 + | putative periplasmic protein TERM 3557 2712416 - 2712406 - g 78 -2.6 -5.1848 | opp_overlap 2712406 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG TERM 3558 2713670 - 2713660 - g 70 -3.2 -4.74103 | CTGTTAAGCCAAAAA CCGT ATT ACAG TAAGCTAACCTACGG yfhD 2712397 - 2713941 + | putative transglycosylase TERM 3559 2713999 - 2714027 + T 79 -9.4 -4.17132 | overlap 2714026 GCATTGCGCTATACT GCCGGCCCCGCG CCTTC CGCACGGTCGGC TTTCTTCAGAGCTTT yfhC 2714543 - 2713992 - | tRNA-specific adenosine deaminase TERM 3560 2714167 - 2714179 + g 71 -4.7 -4.65895 | opp_overlap 2714162 ACGTCAATTAGCGAT CCGGC CGC GCCAG TTTTTGCATCGCGCG yfhB 2715203 - 2714568 - | hypothetical protein TERM 3561 2715187 - 2715177 - G 81 -2.4 -5.38497 | overlap 2715179 2715180 2715182 ATCCAAATCAAAAAA GACG ACA CGAC GCTCGTGGCTGACCA STM2570 2716568 - 2715207 - | putative phosphotransferase system IIB component TERM 3562 2715466 - 2715452 - G 71 -4.2 -4.62069 | GCGTGACGCCAAAAA TCAGCG GCT CGCCAA TCCCCAGCAGTCCGA murQ 2717472 - 2716579 - | N-acetylmuramic acid-6-phosphate etherase yfhH 2717588 - 2718436 + | putative DNA-binding transcriptional regulator TERM 3563 2718468 - 2718440 - T 83 -9.6 -4.0896 | opp_overlap 2718460 AAACTGGTTTGAAAA TGGCTCTTCCGC CTCAT GCAGAAGAGCTA TCAAGTTTATTGCGC STM2573 2719392 - 2718475 - | 2-dehydropantoate 2-reductase STM2574 2720610 - 2719414 - | putative permease TERM 3564 2720945 - 2720903 - g 75 -3.7 -4.85545 | opp_overlap 2720904 2720907, overlap 2720904 2720907 ATTAAATTAACAAAA GCAGGCATTATTTTG-CAACG ACA CGCTAACAAAATAATG-CTGG ATTTAAAAAATGCCG STM2575 2720726 - 2721652 + | putative transcriptional regulator yfhL 2721690 - 2721950 + | putative ferredoxin acpS 2722442 - 2722062 - | 4'-phosphopantetheinyl transferase TERM 3565 2722318 - 2722300 - G 74 -6.6 -4.36914 | CGCTTGGCGAGAAAA CGCACCGG CTG CTGATGCG TCTCCCAGATAGCCC pdxJ 2723173 - 2722442 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 3566 2722641 - 2722663 + g 71 -6.2 -4.28254 | overlap 2722643 GCCGCCAGGGTCGCG GCGCTGGC AATACGC GCCAGCTC TTTTGCCTGTTCCGC recO 2723913 - 2723185 - | DNA repair protein RecO TERM 3567 2723226 - 2723243 + g 78 -6.9 -4.66264 | opp_overlap 2723225 2723224 GTTTGGGCATAAATT GCCGGAA CAGC TCCCGGC TTTTTAACGGTTTTC era 2724830 - 2723925 - | GTP-binding protein Era rnc 2725507 - 2724827 - | ribonuclease III TERM 3568 2725184 - 2725200 + g 75 -3.5 -4.8622 | opp_overlap 2725178 2725177, overlap 2725185 CGCCAGAATGGACTC CCGACGG AAT CCGCCGC TTTTTAATTCGCCCG TERM 3569 2725728 - 2725766 + r 75 -11.1 -2.96873 | gap 1, opp_overlap 2725731, overlap 2725725 AATTTATCCAGGAAA TAATTCACGCTGCCG-CT AAAA AGACGGCAGCGTGAACGA TCATTTCATCACAGT TERM 3570 2725763 - 2725731 - R 100 -17.2 -4.015 | gap 1, opp_overlap 2725728 2725725 TTATCCAGGAAATAA TTCACGCTGCCG-CT AAAA AGACGGCAGCGTGAA CGATCATTTCATCAC lepB 2726755 - 2725781 - | lsignal peptidase I lepA 2728571 - 2726772 - | GTP-binding protein LepA TERM 3571 2726868 - 2726882 + g 85 -2.1 -5.45652 | TTTCTTACCTTCTTT CTGTT TCTGC AGCAG TTTTTTCTTACGACT TERM 3572 2728853 - 2728796 - H 79 -11.4 -3.45027 | gap 1, opp_overlap 2728847, overlap 2728794 2728799 AGTCCTGACTAAACA GCAGCCGGCCTACCGCAGTCACGTTCT TGCAG ACAACGTGACTGCGGTAATCCATCC-C ACCGGATTGTCTTCA TERM 3573 2728851 - 2728799 - H 100 -16.4 -2.87501 | opp_overlap 2728847, overlap 2728794 2728796 CCTGACTAAACAGCA GCCGGCCTACCGCAGTCACGTTCT TGCAG ACAACGTGACTGCGGTAATCCATC CCACCGGATTGTCTT gogB 2728976 - 2730469 + | leucine-rich repeat-containing protein STM2585 2731356 - 2731901 + | transposase-like protein STM2585A 2733013 - 2733240 + | PagK-like protein STM2586 2733915 - 2733337 - | phage tail assembly-like protein STM2587 2734729 - 2733905 - | phage tail assembly-like protein TERM 3574 2734034 - 2734048 + g 80 -4.2 -5.05782 | overlap 2734035 ATGACGGGGACTGAT GCAGGT GTT ACCTGA TTTTTTGCAATACGT STM2588 2737098 - 2734726 - | tail fiber-like protein TERM 3575 2736259 - 2736283 + g 95 -12.7 -4.08767 | overlap 2736260 CTCAGATATTTTTGC TGCGGCTGCCG ATG CGGCTGCCGCC TTTTCCGACGCTGCC TERM 3576 2736260 - 2736282 + g 100 -16.2 -3.05046 | overlap 2736259 TCAGATATTTTTGCT GCGGCTGCCG ATG CGGCTGCCGC CTTTTCCGACGCTGC TERM 3577 2736489 - 2736515 + g 95 -15 -3.41125 | overlap 2736512 CTTCAGATGTTTTCG CTGCGGCTGCCG ATG CGGCTGCCGCCG TTCTGGCTGTGTCAG TERM 3578 2736536 - 2736561 + g 73 -5.9 -4.4648 | GCTGTGTCAGCCGAC GCCGCGCTGGC TGAT GCCTCCCCGGC TTTTGTGGTCGCCGT TERM 3579 2736707 - 2736762 + g 89 -13.8 -3.62597 | GTCTGCGCCTGTTCA GATGCCTGCCCTGCGGCGGTGGCATT CCGC GATGCCTCCGATGCCTGGCGGGCAAC TTCTTCCACCATCGC TERM 3580 2737133 - 2737116 - R 100 -10.5 -5.24129 | TGCCTCCATAAAAAA GCCCGCC CGCA GGCAGGC TTCAGATTCATTCAC TERM 3581 2737366 - 2737346 - R 100 -9 -5.07652 | gap 1, overlap 2737348 2737359 CGGTGGAAAATAAAA CGGACAGGG AAAC CCCTG-CCG CCAGCGAAATTACGC TERM 3582 2737434 - 2737419 - R 79 -10.4 -3.62354 | opp_overlap 2737418 2737417 2737421, overlap 2737417 TTGTTAAACGAAAGA GACCGG AAAT CCGGTC AGTTTGTGAAGTTGT STM2589 2740794 - 2737516 - | host specificity protein-J-like TERM 3583 2737689 - 2737703 + g 81 -8.6 -4.26589 | TACGCTCACAGTTAG CCATCA CCG TGATGG TTTTCCCTATCTGAT TERM 3584 2738865 - 2738845 - G 80 -5.3 -4.87803 | overlap 2738862 CAGGCGCAAAGAAAA CGAGGCGCC CTT AACGACTCG CGGTGTGTCCCAGCG TERM 3585 2739967 - 2739944 - G 75 -11 -3.32844 | TGTCCCATGCCATAA CGGGGATGTG TCAG CACATCCCAG AGACACCACGCCGGA TERM 3586 2740762 - 2740773 + g 74 -7.2 -4.08064 | ATCCGGTGCCTCGCG GGGC GTAT GCCC TTTTCCGCCGCCCTT TERM 3587 2740840 - 2740811 - R 95 -12.9 -4.10161 | opp_overlap 2740819 2740831, overlap 2740812 2740814 2740819 TATTACCCCGTAAAA CGACAAAACCGCC CGGA GGCGGTTCTGTCT GAATCTGTTCTGTTG TERM 3588 2740839 - 2740812 - R 100 -16.4 -3.05775 | opp_overlap 2740819 2740831, overlap 2740811 2740814 2740819 ATTACCCCGTAAAAC GACAAAACCGCC CGGA GGCGGTTCTGTC TGAATCTGTTCTGTT TERM 3589 2740837 - 2740814 - R 82 -13.2 -3.08508 | opp_overlap 2740819 2740831, overlap 2740812 2740811 2740819 TACCCCGTAAAACGA CAAAACCGCC CGGA GGCGGTTCTG TCTGAATCTGTTCTG TERM 3590 2740832 - 2740819 - R 93 -9.5 -4.67635 | opp_overlap 2740819 2740831, overlap 2740814 2740812 2740811 CGTAAAACGACAAAA CCGCC CGGA GGCGG TTCTGTCTGAATCTG TERM 3591 2740819 - 2740832 + r 75 -9.5 -3.61239 | opp_overlap 2740819 2740814 2740812 2740811, overlap 2740831 CGTAAAACGACAAAA CCGCC CGGA GGCGG TTCTGTCTGAATCTG STM2590 2741503 - 2740856 - | tail assembly protein I-like STM2591 2742000 - 2741401 - | tail assembly protein K-like STM2592 2742843 - 2742145 - | phage tail component L-like protein STM2593 2743182 - 2742853 - | phage tail component M-like protein STM2594 2746280 - 2743185 - | phage tail component H-like protein TERM 3592 2744310 - 2744338 + gr 74 -2.4 -5.1101 | gap 1, opp_overlap 2744310 GATGCGCTGCTGAAA TGACAAAAGCTGC TTAT GC-GCTTCCGTCA TTTTTTCGGTCGTGG TERM 3593 2744449 - 2744475 + gr 74 -2.9 -4.87786 | overlap 2744461 TTGTGGTAAGTCTTT GGCTTTTTCGC CTGTT GTGACAACGCC TTTTTATGACGTTCA TERM 3594 2744751 - 2744761 + gr 77 -4.6 -4.96848 | opp_overlap 2744751 CTGGGAAGAAGACAC CGTC CAG GGCG TTTTTCTGTCGCGCG TERM 3595 2745662 - 2745685 + gr 71 -10.3 -2.7169 | overlap 2745656 2745654 TCACCCGCAGCAGCT CGGTACGGG AGAGGC CCTGTACCG TCGTCTGCTCTTTCA TERM 3596 2745938 - 2745913 - GR 71 -4.6 -4.56775 | ATCTGGCGGTAAAAA GCAGCACTTG TCCTGT CCTGTGCTGC CGCCACAGCCGCTGA STM2595 2746590 - 2746252 - | minor tail-like protein STM2596 2746982 - 2746587 - | minor tail-like protein TERM 3597 2747015 - 2747000 - R 86 -11.8 -3.48924 | TGATTTTCCATAGAA GCCCCG GAAC CGGGGC GGACTGATAAGAGAG STM2597 2747779 - 2747033 - | major tail-like protein TERM 3598 2747538 - 2747550 + g 70 -5.5 -4.38712 | overlap 2747534 GCCAGCGTGGCCGTG GTGTC ACC GACGC TTTTCTGCCCCTGCG STM2598 2748188 - 2747787 - | hypothetical protein TERM 3599 2748137 - 2748118 - GH 71 -7.8 -3.98658 | AGTCCATCAAAAAGA GTGACAGG TGCG CCAGTCAC GGATTCCAGCTTTTC TERM 3600 2748193 - 2748240 + Gr 100 -32.2 -4.11692 | opp_overlap 2748194 2748195 2748236, overlap 2748194 TGTTTGCTCATCAGA ATGCCTCCTTTCCTCCCCGGCC TGAA GGCCGGGGAGGAAAGGAGGCGG TTTTCCGGCTAACTG TERM 3601 2748239 - 2748194 - gR 100 -33.5 -3.40403 | opp_overlap 2748193 2748194, overlap 2748195 2748236 GTTTGCTCATCAGAA TGCCTCCTTTCCTCCCCGGCC TGAA GGCCGGGGAGGAAAGGAGGCG GTTTTCCGGCTAACT TERM 3602 2748194 - 2748239 + Gr 100 -35.7 -3.06694 | opp_overlap 2748194 2748195 2748236, overlap 2748193 GTTTGCTCATCAGAA TGCCTCCTTTCCTCCCCGGCC TGAA GGCCGGGGAGGAAAGGAGGCG GTTTTCCGGCTAACT TERM 3603 2748238 - 2748195 - gR 100 -37 -2.64099 | opp_overlap 2748194 2748193, overlap 2748194 2748236 TTTGCTCATCAGAAT GCCTCCTTTCCTCCCCGGCC TGAA GGCCGGGGAGGAAAGGAGGC GGTTTTCCGGCTAAC TERM 3604 2748326 - 2748376 + Gr 76 -9.1 -3.83502 | overlap 2748326 2748329 TAAATACCGGTTTTA C-CCCACGACTGAGCAGGCTGAGCT TTT AGCTCAGAC-GTTCGGTTGTGTGCG TTTCGTCTACAACTC TERM 3605 2748329 - 2748372 + Gr 83 -14 -2.69601 | gap 1, overlap 2748326 2748326 ATACCGGTTTTACCC CACGACTGAGCAGGCTGAGCT TTT AGCTCAGAC-GTTCGGTTGTG TGCGTTTCGTCTACA TERM 3606 2748749 - 2748774 + Gr 76 -9.1 -3.82097 | gap 1, opp_overlap 2748755, overlap 2748754 TACCGTCACCATTTC CAAAGATGCCGC AGG GCGGTA-CTTTG TTTCGTGCCTTTGCG TERM 3607 2748798 - 2748844 + Gr 75 -9.5 -3.60475 | overlap 2748802 CTTTGCGAATTTGAA CCCGCATCACTGCCGATCA CCTCTTCAA TGGTCGGCATTGATGTTGG TTTAAAAGATTTGTT TERM 3608 2748802 - 2748840 + Gr 75 -9.7 -3.51976 | overlap 2748798 GCGAATTTGAACCCG CATCACTGCCGATCA CCTCTTCAA TGGTCGGCATTGATG TTGGTTTAAAAGATT TERM 3609 2748963 - 2748953 - gR 72 -2.4 -4.8622 | overlap 2748960 CCGGTTAAGCAAAAA GGCC AAA GGCT CAAAGAACCGCGCCA TERM 3610 2749203 - 2749226 + Gr 87 -8.2 -4.63527 | gap 1, overlap 2749203 2749204 GGCGAATGGGCGGGG C-GGTCAGTGG TAG CCATTGACCAG TTTTTCCCGTCCTCA TERM 3611 2749204 - 2749224 + Gr 76 -11.9 -2.62098 | overlap 2749203 2749203 GCGAATGGGCGGGGC GGTCAGTGG TAG CCATTGACC AGTTTTTCCCGTCCT STM2599 2748177 - 2749427 + | putative virulence protein STM2600 2750054 - 2749476 - | minor tail protein Z-like TERM 3612 2750092 - 2750073 - R 100 -16.4 -3.53343 | opp_overlap 2750064 2750063 AATGCCTCCGGGAAA CCCCGGCC TTTA GGCCGGGG AGCAGTCAAACATTC STM2601 2750465 - 2750082 - | minor capsid protein FII STM2602 2750835 - 2750476 - | DNA packaging-like protein TERM 3613 2750881 - 2750867 - R 95 -11.4 -4.45068 | opp_overlap 2750867 ATTTGTAACAATAAA GGCCTG AAT CAGGCC TTTTGGGATGCTTAA TERM 3614 2750867 - 2750881 + r 89 -11.4 -4.17023 | opp_overlap 2750867 ATTTGTAACAATAAA GGCCTG AAT CAGGCC TTTTGGGATGCTTAA STM2603 2751921 - 2750893 - | phage head-like protein TERM 3615 2751969 - 2751955 - R 95 -12.8 -4.1043 | opp_overlap 2751955 GTTAAATACGATAAA GGCCGC TTC GCGGCC TTCTTATTACGGTAA TERM 3616 2751955 - 2751969 + r 95 -12.8 -3.96068 | opp_overlap 2751955 GTTAAATACGATAAA GGCCGC TTC GCGGCC TTCTTATTACGGTAA STM2604 2752323 - 2751976 - | phage head-like protein TERM 3617 2752294 - 2752281 - G 77 -8.1 -4.09685 | opp_overlap 2752280 CGTTACCGGCGAAAA TGCGG TTAT CCGCA CGTTTCTCAATAGTG STM2605 2753832 - 2752336 - | head-tail preconnector-like protein TERM 3618 2753451 - 2753425 - G 74 -10 -3.727 | overlap 2753419 2753426 GTCAGCACAGTCAAA CGCCCCGGCAGC CTG ACCGCCGGGACT GTCAATATCCAGCAG TERM 3619 2753450 - 2753426 - G 79 -13.5 -2.83299 | overlap 2753419 2753425 TCAGCACAGTCAAAC GCCCCGGCAGC CTG ACCGCCGGGAC TGTCAATATCCAGCA TERM 3620 2753772 - 2753757 - G 91 -7.5 -5.07652 | GCGCGCAAAAGAAAA CCCGC GCATAG GCGGG TTCAAGCAGCAACGG STM2606 2755402 - 2753822 - | head-tail preconnector-like protein TERM 3621 2753969 - 2753986 + g 83 -8.4 -4.4831 | TATCTCCTGGTAATC CTCGCC CATAAT GGCGAG TTCTTTTTCATAGGT TERM 3622 2754143 - 2754125 - G 73 -5.8 -4.48987 | overlap 2754127 CTCCCAGAAGGAAAA CCTGGCCC GGG GTGCCCGG ATAACTCCCCGTATC TERM 3623 2754358 - 2754338 - G 84 -13.3 -3.06696 | CCCGGCGGCAATATA CCGGAGCAG CGC CTGCTCCAG CGCTGAAAAGCCATT TERM 3624 2755004 - 2754961 - G 83 -6 -4.83615 | overlap 2754962 2754974 CAGGCTGGAGAAAAA TTTCACCATTAAAGGCGTGA ACGC CCACGCCTTCACGGATGAAC TCTGTAAAAGTACGC TERM 3625 2755003 - 2754962 - G 71 -9.5 -3.49687 | overlap 2754961 2754974 AGGCTGGAGAAAAAT TTCACCATTAAAGGCGTGA ACGC CCACGCCTTCACGGATGAA CTCTGTAAAAGTACG TERM 3626 2754991 - 2754974 - G 73 -9.1 -3.79519 | overlap 2754962 2754961 AATTTCACCATTAAA GGCGTGA ACGC CCACGCC TTCACGGATGAACTC STM2607 2755602 - 2755399 - | head-to-tail joining-like protein STM2608 2757517 - 2755586 - | terminase-like large protein TERM 3627 2755882 - 2755864 - G 73 -5.2 -4.57569 | overlap 2755866 CCACCTCCGTAAAAA CATCCGGA TTA TCCGGAAA GCGGATCGCATAAGG TERM 3628 2755880 - 2755866 - G 76 -10 -3.90316 | overlap 2755864 ACCTCCGTAAAAACA TCCGGA TTA TCCGGA AAGCGGATCGCATAA TERM 3629 2756062 - 2756077 + g 91 -3.9 -5.4477 | CTTTGACAGGCAGCA CGCGG AAAATG CCGTG TTTTTTTGAGCGTTT TERM 3630 2756390 - 2756401 + g 71 -4.4 -4.56597 | opp_overlap 2756390 TTTTTCCAGCAAAAG CTCA TGGC TGAG TTTTTCGGCCACCGC TERM 3631 2756826 - 2756814 - G 91 -7.7 -4.9792 | opp_overlap 2756824 CACGGTACATAAAAA CGCAT AAA ATGCG CCGATTCATTTGCCG STM2609 2758033 - 2757539 - | DNA packaging-like protein TERM 3632 2758055 - 2758109 + H 88 -5.4 -5.60993 | gap 3, opp_overlap 2758041 2758055 2758054 2758059, overlap 2758073 GTCTCCCGGAAACAG GAAAGGATCTGC--GATCTTCGTTTTT AACT AAAAACGTT-ATCCAGCAGATCCTTTC TTTTTTTCTAAAAAA TERM 3633 2758438 - 2758427 - g 71 -4.4 -4.64846 | overlap 2758422 2758430 CGATAAAGGACAAAA TAGC GCCC GCTA TTCCGGCGTAATAAA STM2610 2758320 - 2758721 + | hypothetical protein TERM 3634 2758937 - 2758952 + T 89 -4.7 -5.64421 | overlap 2758919 GCAGGTAAGCTCCTT TTCCC TCCTGC GGGAA TTTTTTATTTGCACT STM2611.S 2759430 - 2758957 - | endopeptidase-like protein STM2612 2759879 - 2759427 - | morphogenesis-like protein STM2613 2760192 - 2759863 - | hypothetical protein STM2614 2760468 - 2761154 + | hypothetical protein TERM 3635 2761352 - 2761335 - T 100 -10.5 -5.64421 | AGGGGAAATAAAAAA GGCCGCC GAAT GGCAGCC TCAAATGGAATATGT TERM 3636 2761566 - 2761584 + T 93 -11.8 -3.76641 | CTTTCATTCTAATCT CTCCTCTT CTT AAGAGGAG TTTAGCTATTGGGAT TERM 3637 2761753 - 2761729 - T 100 -9.3 -5.03145 | overlap 2761730 TAATGGCGGAAAAAA TTGACCAGTGA AGT CCACTGGTCAT GGGTCATGCAGTTGT TERM 3638 2761752 - 2761730 - T 88 -12.8 -3.61164 | overlap 2761729 AATGGCGGAAAAAAT TGACCAGTGA AGT CCACTGGTCA TGGGTCATGCAGTTG TERM 3639 2761943 - 2761932 - T 70 -2.2 -5.08169 | ACATAGCGCAAAAAA TACC GATT GGCA GACTTAGAAATGGAA TERM 3640 2761978 - 2761961 - T 75 -6.2 -4.39571 | CTTAGAAATGGAAAA CCCCGC ACGATG GCGAGG CTTGAATTTGTTTGG STM2616 2762627 - 2762064 - | antirepressor-like protein TERM 3641 2762348 - 2762366 + g 71 -9.5 -3.48395 | TTTCGAGCATCTTGG CGTGGCG GGCAG CGCCGCG TTCTGTCCAGAGGAT TERM 3642 2762512 - 2762527 + g 72 -2.6 -4.8667 | TTGTTCAGAAAGTTA TCAGAA ATGT TTTTGA TTTTTGTGCCGTATA TERM 3643 2762811 - 2762797 - R 91 -7.1 -5.59534 | opp_overlap 2762797 2762799 AACGACAATAAAAAA CACGC TCGCG GCGTG TCTCTGTCGCGGTGA STM2617 2763577 - 2762900 - | antiterminator-like protein STM2618 2763714 - 2763574 - | hypothetical protein TERM 3644 2763715 - 2763726 + r 70 -2.2 -5.00616 | gap 1 CAGTTCTGGTTTCAT GC-GG CCT CCAGC TTTTTTAGCGCACGC STM2619 2764322 - 2763711 - | hypothetical protein TERM 3645 2764118 - 2764133 + g 78 -6 -4.72201 | overlap 2764119 CCGCGGCTTTCCGCT GGCGCC AGGC GGCGCG TTCTTTTTTCTCAGC TERM 3646 2764119 - 2764132 + g 70 -9.5 -3.42236 | overlap 2764118 CGCGGCTTTCCGCTG GCGCC AGGC GGCGC GTTCTTTTTTCTCAG TERM 3647 2764532 - 2764564 + r 100 -15.6 -3.31144 | gap 1 GTATTTCATCGCCAT CACC-CCGCCCAGCT CATG AGCTGGGCGGCGGCG TTCTCGGCCTCGCGC STM2620 2765133 - 2764531 - | hypothetical protein TERM 3648 2765126 - 2765151 + g 76 -12.6 -2.84794 | overlap 2765123 ATGAGTTGTAATTCG TGCGCCATGG TATTCT CCGTGGCGCA TAATTGTCAGGTTAC STM2621 2765782 - 2765549 - | hypothetical protein TERM 3649 2765921 - 2765908 - R 100 -9.5 -5.09225 | ATTTTAGGCAAAAAA CCCGC CGCA GCGGG TTCAGATAAAAGAAA TERM 3650 2765952 - 2765938 - R 79 -4.2 -5.23292 | TCAGATAAAAGAAAA CCCG TACTCGG CGGG TTCACATTCATTCAA STM2622 2766367 - 2766074 - | hypothetical protein STM2623 2766753 - 2766442 - | hypothetical protein STM2624 2767097 - 2766750 - | hypothetical protein STM2625 2767857 - 2767108 - | putative replication protein STM2626 2768843 - 2767860 - | replication protein 15-like TERM 3651 2768272 - 2768289 + g 88 -11.3 -4.09864 | opp_overlap 2768281 2768284 GCCCTTCCCTCTTTT CGGGGAT AACT ATCCCCG TTTTCAGGGATGGCT TERM 3652 2768343 - 2768318 - G 77 -8.3 -4.11484 | opp_overlap 2768309 2768333, overlap 2768319 2768342 CTGAATGGGGTAAAA CGCTATCCCTG TTTT CAGGGATAACT ATCCCCGTTTTCGGG TERM 3653 2768342 - 2768319 - G 76 -11.8 -3.06569 | opp_overlap 2768309 2768333, overlap 2768318 TGAATGGGGTAAAAC GCTATCCCTG TTTT CAGGGATAAC TATCCCCGTTTTCGG TERM 3654 2768877 - 2768901 + r 72 -8.6 -3.81062 | gap 1, opp_overlap 2768877, overlap 2768872 2768870 TTTTTGCACCAGAAA GCCGTTGGTGA CCCC TCACC-GCGGC TTTCGCCTTTTTAGT STM2627 2769302 - 2768928 - | cI-like protein STM2628 2769627 - 2770037 + | regulatory protein TERM 3655 2770062 - 2770081 + F 100 -10.8 -4.91109 | opp_overlap 2770060 ACTCATCCATACAGG TAGCACCT CTTT AGGTGCTA TTTTTATGCTCCAAG STM2629 2770087 - 2770347 + | hypothetical protein TERM 3656 2770456 - 2770444 - g 74 -3.4 -4.86731 | GGCGCGCAAAGAAAA GGAA TATTG TTCC AGGCAGTGCGCTGAA STM2630 2770340 - 2770498 + | hypothetical protein STM2631 2770520 - 2770870 + | hypothetical protein TERM 3657 2770893 - 2770876 - f 93 -10.5 -4.72497 | CATCCATTAAGAAAA CGCCCAC CGAA GCGGGCG TGCCCTGTCCGGTCC TERM 3658 2772616 - 2772584 - g 80 -11.9 -3.45032 | overlap 2772577 2772575 CAAGAAGAGCCAGAA GCAGCCTGGCCGGAA TAC TTCGAGCCGGGCCGC TATGAAGGTGTACCA STM2632 2770997 - 2773882 + | exodeoxyribonuclease VIII-like protein STM2633.S 2773893 - 2775002 + | enterohemolysin 1-like protein TERM 3659 2775024 - 2775040 + F 70 -5.1 -4.3898 | overlap 2775005 CGGGAGGGGGTACGC CCTCC CACCTGA GGAGG TTTTATGCGCCTAAT STM2634 2775045 - 2775284 + | putative cytoplasmic protein STM2635 2775325 - 2775609 + | excisionase-like protein STM2636 2776816 - 2775587 - | integrase-like protein TERM 3660 2775939 - 2775927 - G 78 -2.6 -5.18371 | opp_overlap 2775936 TTTGAGAAAACAAAA CGGC CTGGC GCCA GCTCAATGGCTCGTT TERM 3661 2776909 - 2776897 - R 76 -4.1 -4.96848 | overlap 2776898 TGGTGGACACAAAAA CCATG ACT CATGA TGTCGTAGGTTGACT rseC 2777793 - 2777314 - | SoxR reducing system protein RseC TERM 3662 2777537 - 2777527 - G 73 -5.4 -4.55295 | overlap 2777529 CGCCGCACAAAGAAA TAGC CCC GCTA AAGGCGACATATAGA rseB 2778746 - 2777790 - | periplasmic negative regulator of sigmaE TERM 3663 2778660 - 2778687 + g 74 -9.7 -3.72576 | opp_overlap 2778660 CATCTGCTGCAATAA CGCCCCGGACG CAGGGT CGGCCGAGGCG TTTGCTGAGAAGAAC TERM 3664 2778687 - 2778660 - G 83 -11.9 -3.61715 | opp_overlap 2778660 CATCTGCTGCAATAA CGCCCCGGACG CAGGGT CGGCCGAGGCG TTTGCTGAGAAGAAC rseA 2779396 - 2778746 - | anti-RNA polymerase sigma factor SigE TERM 3665 2779097 - 2779117 + g 76 -3.2 -5.00616 | gap 1, overlap 2779098 GCCCATTTGGGTAAG CTGCG-CCG CCCA CGGACGCAC TTTTTTCCAGAACGG rpoE 2780003 - 2779428 - | RNA polymerase sigma factor RpoE TERM 3666 2780101 - 2780121 + H 73 -2.5 -5.1502 | overlap 2780103 TTAGAGTGTCTATGT TTCGTAAAG TTC CGTTACGCA TTTGTTTTTGTTTGT TERM 3667 2780575 - 2780595 + G 70 -8.9 -3.72576 | overlap 2780572 2780578 TCCACGTTTTATGCG CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACCGAC nadB 2780428 - 2782050 + | L-aspartate oxidase yfiC 2782772 - 2782035 - | putative transferase TERM 3668 2782146 - 2782128 - G 75 -11.7 -2.90496 | overlap 2782125 TCTGTCGCTAAAGCA CTCCCCG GCTTG CGGGGAG AATGCGAGCAAAACC TERM 3669 2782809 - 2782796 - H 100 -9.5 -5.41746 | AACCTTGCAAAAAAA CGGCG ACAG CGCCG GGTGAAAACAATACC TERM 3670 2783085 - 2783066 - g 80 -9.2 -4.11692 | CAGGCACCGGTAAAA CGGCGGCA TATC TGCTGCCG GCGTTGCAGCACCTG srmB 2782903 - 2784237 + | ATP-dependent RNA helicase SrmB TERM 3671 2784265 - 2784244 - T 93 -14.5 -3.44206 | opp_overlap 2784244 GAAGAGTGATGATAA TGCCGGGTT CGTT AACCCGGCA TTTTTTTATCTTCCA TERM 3672 2784244 - 2784265 + T 100 -14.5 -5.80817 | opp_overlap 2784244 GAAGAGTGATGATAA TGCCGGGTT CGTT AACCCGGCA TTTTTTTATCTTCCA yfiE 2785154 - 2784255 - | putative transcriptional regulator yfiK 2785257 - 2785844 + | neutral amino-acid efflux protein TERM 3673 2785821 - 2785833 + T 77 -3.3 -5.14563 | overlap 2785820 TTACTGCTGGTGTAC TGCGC GGT GCGGA TTTTTTACTGACCCA TERM 3674 2785885 - 2785861 - T 100 -16.5 -5.34857 | opp_overlap 2785861 CCAAATAAAACAAAA GCGGAAAAGGC CCG GCCTCTTCCGC TTGTTATTACCGGAT TERM 3675 2785861 - 2785885 + T 100 -14.3 -3.94877 | opp_overlap 2785861 CCAAATAAAACAAAA GCGGAAAAGGC CCG GCCTCTTCCGC TTGTTATTACCGGAT yfiD 2786289 - 2785906 - | autonomous glycyl radical cofactor GrcA TERM 3676 2787181 - 2787195 + G 91 -7.8 -5.1287 | CATCCCTCGCCACTC TCTGCG CAC CGCGGA TTTTTTGGCTGTAAC ung 2786608 - 2787297 + | uracil-DNA glycosylase TERM 3677 2787301 - 2787313 + T 74 -6.9 -4.37092 | overlap 2787302 GAGAGTGAATAACGT TGGCG ACT CGCCG TTTTATCGCCCGGAT TERM 3678 2787332 - 2787345 + T 75 -9.5 -3.48276 | opp_overlap 2787332 2787331 2787342 TATCGCCCGGATAAC GGCGC GAAA GCGCC TTGTCTGACCGGGCG yfiF 2788450 - 2787413 - | putative methyltransferase TERM 3679 2787889 - 2787911 + g 100 -10.6 -4.72272 | CCTGCTTTACCCATT GCTTAACGGT CGT ACCGTTACGC TTTTTAATCAGGAAA TERM 3680 2788097 - 2788109 + g 80 -9.1 -4.11216 | opp_overlap 2788096 ACGGCTCTGGAATAG CGCCT GGC AGGCG TTTTCACCGTAGACG TERM 3681 2788216 - 2788254 + g 93 -13.1 -4.00934 | gap 1 CTTTCTCAGGCGTTT CATCGCC-TGGCGCGCGG GACA CGGTGCGCCACGGCGAAG TTTCATGTTTACGGT TERM 3682 2788627 - 2788607 - H 87 -10.4 -4.13591 | opp_overlap 2788607 2788626 GTAACATTATAGAAA CATCCCGC GCGTA GCGGGACG TCTTCCGACGTATTC trxC 2788654 - 2789073 + | thioredoxin 2 TERM 3683 2789080 - 2789100 + F 100 -14.7 -4.16943 | opp_overlap 2789075 2789076, overlap 2789074 GCGCTGTAAACGCCA CGGGGCGCA TCT TGTGCCCCG TTTTCACCTCTGCCA TERM 3684 2789285 - 2789306 + G 76 -2.9 -5.01497 | overlap 2789292 2789297 TGTGTGATACGTTAA CGCCTTCTC AGGC GAAAAGCCG TTTTTGTCTGGTCAT yfiP 2789146 - 2789826 + | putative cytoplasmic protein TERM 3685 2790601 - 2790583 - g 81 -8 -4.25104 | TTCTGGTGATTAAAA GCGGCCGA AGC CCGGCAGC CCAGCGTTTACTTAA yfiQ 2789880 - 2792540 + | putative acetyl-CoA synthetase TERM 3686 2792796 - 2792785 - g 71 -5.8 -4.3739 | opp_overlap 2792786, overlap 2792772 2792786 CACTGCTGGAGAAAA TCGC CAGC GCGA CGCAGCGTATTTGTA pssA 2792655 - 2794010 + | phosphatidylserine synthase TERM 3687 2794017 - 2794033 + F 89 -9.4 -4.66938 | opp_overlap 2794016 ATCCTGTAATCGAAG CCCCGT CCTGT ACGGGG TTTTCTCTTAGGAGT yfiM 2794055 - 2794378 + | hypothetical protein kgtP 2795676 - 2794375 - | alpha-ketoglutarate transporter TERM 3688 2795477 - 2795459 - G 90 -5.8 -5.14563 | opp_overlap 2795460, overlap 2795460 2795461 GGCCGCATTAAAAAA CCGGCGGC AAA GACGCCTG CCGTTTGCAAAAGCT TERM 3689 2795696 - 2795708 + r 72 -2.6 -5.08255 | overlap 2795685 TTCTCCTTGTTGCCA GGCT TAATC GGCC TTTTATTTTGGAGAT STM2655 2796235 - 2795780 - | putative cytoplasmic protein TERM 3690 2796396 - 2796437 + r 95 -13.1 -3.76224 | opp_overlap 2796401 2796406, overlap 2796401 2796406 CCGGCAGAAACAGAC AAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTA TTTGATGCCTGGCAG TERM 3691 2796432 - 2796401 - R 100 -17.4 -5.1634 | opp_overlap 2796396 2796401 2796406, overlap 2796406 AGAAACAGACAAAAA CAAAAGGCCCTGTC TTCC GACAGGGCCCTTCG TTTTATTTGATGCCT TERM 3692 2796401 - 2796432 + r 100 -13 -4.9448 | opp_overlap 2796401 2796406, overlap 2796396 2796406 AGAAACAGACAAAAA CAAAAGGCCCTGTC TTCC GACAGGGCCCTTCG TTTTATTTGATGCCT TERM 3693 2796427 - 2796406 - R 100 -15.9 -5.38839 | opp_overlap 2796401 2796396 2796406, overlap 2796401 CAGACAAAAACAAAA GGCCCTGTC TTCC GACAGGGCC CTTCGTTTTATTTGA TERM 3694 2796406 - 2796427 + r 93 -15.9 -2.91914 | opp_overlap 2796406 2796401, overlap 2796401 2796396 CAGACAAAAACAAAA GGCCCTGTC TTCC GACAGGGCC CTTCGTTTTATTTGA TERM 3695 2799217 - 2799235 + r 70 -8.8 -3.35798 | overlap 2799220 CCAGAGAATGCTTTG GTGGTGGG GCT CCCACTGC TTGTACGTACACGGT TERM 3696 2799269 - 2799281 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3697 2799823 - 2799847 + r 71 -8 -3.93061 | gap 1, opp_overlap 2799821 2799829, overlap 2799825 2799826 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 3698 2799922 - 2799887 - R 77 -9.2 -4.00532 | opp_overlap 2799889 2799898, overlap 2799883 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA TTAGGGCAGGTGACT TERM 3699 2801835 - 2801860 + r 72 -4.7 -4.65895 | gap 1, overlap 2801829 2801841 GCAGCTCACCGTCGC GAGGTG-GCGTA TAT TACGCTTTCCTC TTTTTGAGTCAAGCC TERM 3700 2801841 - 2801853 + r 73 -7.7 -4.13748 | overlap 2801829 2801835 CACCGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTTTGAG TERM 3701 2802096 - 2802079 - R 100 -10.5 -5.27335 | opp_overlap 2802079 GTTTTTAAACAAAAA CGAGCCC GTCA GGGCCCG TTTTATTCAAATTTG TERM 3702 2802079 - 2802096 + r 84 -8.3 -4.6971 | opp_overlap 2802079 GTTTTTAAACAAAAA CGAGCCC GTCA GGGCCCG TTTTATTCAAATTTG clpB 2804689 - 2802116 - | protein disaggregation chaperone TERM 3703 2803144 - 2803156 + g 73 -5.5 -4.59773 | overlap 2803143 CTTCCGACTGGGTCG CGGCT TCC AGCTG TTTTTCCAGCTCCGG TERM 3704 2803885 - 2803865 - G 74 -7.5 -4.1552 | opp_overlap 2803865 CAGCTCGTCAATAAA CAGGATGAC GTT GCCTTCCTG TTTCGCCAGATCGTT yfiH 2805550 - 2804819 - | hypothetical protein TERM 3705 2805023 - 2805005 - G 71 -4.5 -4.56597 | opp_overlap 2805005 CCCGTGCGGCAAAAA TGCGCTA TCGGC TTGCGCA TCTTTTGCTAAAAAT TERM 3706 2805048 - 2805038 - G 78 -6.8 -4.56775 | ATCTTTTGCTAAAAA TGCG TCA CGCA CTTCCGGCCCCACTT rluD 2806527 - 2805547 - | 23S rRNA pseudouridine synthase D TERM 3707 2805602 - 2805584 - G 70 -6.6 -4.12188 | opp_overlap 2805601 TTATGATCTTCAAAA TCGGCGCG CAT CGCATCGA TAAGGTCCACCATAT TERM 3708 2806559 - 2806569 + H 74 -8.2 -3.8766 | TAACGTTGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC yfiO 2806659 - 2807396 + | outer membrane protein assembly complex subunit YfiO TERM 3709 2807441 - 2807412 - f 100 -15.1 -3.12943 | opp_overlap 2807417, overlap 2807417 AGCAATACAAACAAG CAAAACGGCAGCC TTCC GGCTGCCGTTTTT TTATTCGGTATCTGA TERM 3710 2807436 - 2807417 - f 100 -15 -4.64613 | opp_overlap 2807417, overlap 2807412 TACAAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGGTA TERM 3711 2807417 - 2807436 + F 100 -15 -5.8187 | opp_overlap 2807417 2807412 TACAAACAAGCAAAA CGGCAGCC TTCC GGCTGCCG TTTTTTTATTCGGTA TERM 3712 2807604 - 2807589 - f 72 -6.2 -4.35693 | opp_overlap 2807588 AAAGTGACAAAATAA TGTGAT TTAC ATCACA CATTTTGACATTAAG yfiA 2807668 - 2808006 + | translation inhibitor protein RaiA TERM 3713 2808032 - 2808047 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGG STM2666 2808110 - 2808157 + | hypothetical protein TERM 3714 2808226 - 2808206 - f 100 -14 -4.03167 | opp_overlap 2808206 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3715 2808206 - 2808226 + F 100 -14 -5.5112 | opp_overlap 2808206 GAAGACGAACAAGAA GGCCTCCC CCACC GGGAGGCC TTTTTTATTGATAAC TERM 3716 2809003 - 2808977 - g 71 -4.3 -4.67353 | overlap 2808979 2808991 2808992 GCAGCGATGGAAAAA GTCGCGCAG GCAAACTCT CCGCGCGTC GCGGCGCTCGGCAGC pheA 2808257 - 2809417 + | bifunctional chorismate mutase/prephenate dehydratase STM2668 2810286 - 2809378 - | putative cytoplasmic protein TERM 3717 2809587 - 2809603 + g 76 -12.3 -3.0497 | opp_overlap 2809586 2809587 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3718 2809603 - 2809587 - G 72 -12.3 -2.57564 | opp_overlap 2809587, overlap 2809586 CCATCGTCGGACAAC GTACCGG CAA CCGGTAC TCTTCCAGCTGCTCT TERM 3719 2809644 - 2809634 - G 71 -8.2 -3.85698 | overlap 2809635 TCTTGCGGTGAGAAA CGCG CCA CGCG CCAGCCGTCAAACAT TERM 3720 2810112 - 2810089 - G 77 -7.4 -4.31433 | overlap 2810091 CATGGCCACAATAAA TCCGCCCTGC TCAC GCAAGGCAAA ACAGCCCACCTCTTC TERM 3721 2810309 - 2810323 + r 91 -11.4 -4.36262 | opp_overlap 2810309 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT TERM 3722 2810323 - 2810309 - R 100 -11.4 -5.37593 | opp_overlap 2810309 CCTTAAACGAAAAAA GCCAGC AAA GCTGGC TTTTAGTATAGATGT tyrA 2811465 - 2810344 - | bifunctional chorismate mutase/prephenate dehydrogenase aroF 2812545 - 2811475 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3723 2812399 - 2812381 - G 71 -10.2 -3.24925 | ACCGCATACCACCAA CAGACGCG GAT CGCGCCCG GCAATAATGTCAGAA TERM 3724 2812755 - 2812769 + H 83 -4.2 -5.43514 | opp_overlap 2812754 2812755 2812757, overlap 2812754 2812757 GAAAAGCGGTAAAAT GAGCGA TGC TCGCTA TTTTTTGATTATTTT TERM 3725 2812757 - 2812767 + H 74 -6.8 -4.30543 | opp_overlap 2812755 2812754 2812757, overlap 2812754 2812755 AAAGCGGTAAAATGA GCGA TGC TCGC TATTTTTTGATTATT yfiR 2812985 - 2813503 + | putative periplasmic protein TERM 3726 2813834 - 2813859 + G 72 -4 -4.74103 | gap 1, opp_overlap 2813831 2813834, overlap 2813836 2813837 AGCCGCAGACGATAA GCTCATTGGCT TAATT AGCCACTG-GC TTTTTCCATTGCCGG yfiN 2813496 - 2814716 + | hypothetical protein TERM 3727 2814807 - 2814835 + T 70 -5.1 -4.39002 | opp_overlap 2814799 2814810, overlap 2814810 GAGCAAACCCATAAA AAAGGGGCCAGCG TAA TGCCAGCCCCTTC TTTTCTACAAGCTTT TERM 3728 2814810 - 2814832 + T 74 -6.8 -4.30995 | opp_overlap 2814799 2814810, overlap 2814807 CAAACCCATAAAAAA GGGGCCAGCG TAA TGCCAGCCCC TTCTTTTCTACAAGC TERM 3729 2814832 - 2814810 - T 100 -10.5 -5.33866 | opp_overlap 2814807 2814810, overlap 2814799 CAAACCCATAAAAAA GGGGCCAGC GTAAT GCCAGCCCC TTCTTTTCTACAAGC rplS 2815220 - 2814873 - | 50S ribosomal protein L19 trmD 2816028 - 2815261 - | tRNA (guanine-N(1)-)-methyltransferase rimM 2816621 - 2816073 - | 16S rRNA-processing protein rpsP 2816888 - 2816640 - | 30S ribosomal protein S16 TERM 3730 2816944 - 2816912 - R 84 -8.4 -4.63218 | gap 1, overlap 2816915 CTTGTGTGAATAAAA CAACCGGGCCCCATC GAGG AACGGAGCCCGGC-G TCATATTAAAAGCCC TERM 3731 2816942 - 2816915 - R 100 -13.4 -4.43307 | overlap 2816912 GTGTGAATAAAACAA CCGGGCCCCATC GAGG AACGGAGCCCGG CGTCATATTAAAAGC ffh 2818563 - 2817202 - | signal recognition particle protein corE 2818729 - 2819520 + | hypothetical protein TERM 3732 2820605 - 2820574 - g 74 -7.2 -4.09685 | overlap 2820575 2820577 GGTCACGCCGCAAAA CGACGGTTCGGTCA TTAT TGACGGTACCGCCA ACGTCCGGGAAATCA yfjD 2819630 - 2820826 + | hypothetical protein TERM 3733 2820850 - 2820833 - f 74 -11.3 -2.82449 | opp_overlap 2820833, overlap 2820832 GCGGAGTAACACAAT GGCGAAC TCCG GTTCGCC TTTTTTATCGCCGTC TERM 3734 2820833 - 2820850 + F 100 -11.3 -5.252 | opp_overlap 2820833 2820832 GCGGAGTAACACAAT GGCGAAC TCCG GTTCGCC TTTTTTATCGCCGTC STM2680 2820947 - 2821552 + | putative cytoplasmic protein TERM 3735 2821578 - 2821558 - T 100 -9 -5.53288 | TTTAAGCTAAAAAAA TGGCCGAC TTTAC ATCGGCCA TCAAACTTTTACTTC grpE 2822177 - 2821587 - | heat shock protein GrpE TERM 3736 2822005 - 2822047 + g 79 -2.7 -5.14563 | gap 1, overlap 2822007 AACACGGTGTCGCGT TCGCGAGTCTGG-GCTTCTG CAAG CTGAACTTCCAGATTCGCAA TTTTTTCATCGCGCG TERM 3737 2822143 - 2822155 + g 72 -2.6 -4.84673 | overlap 2822132 ATTTCTTCCGGGGCT TGCC CCTCA GGCG TTTTCTGTTCTTTAC TERM 3738 2822467 - 2822452 - g 80 -4.6 -5.13473 | overlap 2822453 ATTACAGCTAAAAAA TGTGCC AACC GGCACG CTGGCGGAAATTGGT ppnK 2822300 - 2823178 + | inorganic polyphosphate/ATP-NAD kinase TERM 3739 2823822 - 2823810 - g 71 -10.5 -3.27617 | CAACAAAGCCAGGAA CGCGC CGC GCGCG CGGAACTGCTGCAAT TERM 3740 2824204 - 2824189 - g 79 -7.6 -4.42806 | GCATCGCTAAACAAA TTTCGC TGGC GCGAAA ACATCACGTCAGCCC recN 2823264 - 2824925 + | recombination and repair protein smpA 2825074 - 2825412 + | hypothetical protein yfjF 2825868 - 2825578 - | hypothetical protein TERM 3741 2825701 - 2825712 + g 77 -4.4 -4.85782 | TTTTACCGGACGACT GTAG ATAC CTAC TTTATTTTTCGCCAG yfjG 2826334 - 2825858 - | hypothetical protein smpB 2826484 - 2826966 + | SsrA-binding protein TERM 3742 2826979 - 2827009 + F 71 -9.8 -3.23492 | overlap 2826977 2826980 TAATAGACATTTTTT GTGACCAGCTTC TCAGTAT GAAGCTGGTCAA TGTTCATATCTCATG TERM 3743 2826980 - 2827008 + F 80 -13.3 -2.53613 | overlap 2826979 2826977 AATAGACATTTTTTG TGACCAGCTTC TCAGTAT GAAGCTGGTCA ATGTTCATATCTCAT TERM 3744 2827957 - 2827990 + F 75 -11 -3.01712 | overlap 2827969 GTGGGTACTGGCTGG CGCGGTGGCGGC TGGCGGCATT GCCGCTATCGCG TCTTCCGGCGGCGGC TERM 3745 2829356 - 2829346 - f 80 -6.8 -4.56597 | CGGGCTGCTGAAAAA TGGC GAT GCCA CAGATGATAACCGCC TERM 3746 2830088 - 2830063 - f 72 -4.7 -4.57569 | gap 1, opp_overlap 2830069, overlap 2830068 2830069 2830070 CGATGTCGCGAAAAA CGA-AAGCGCCG CCG CGACGGTTATCG CGCCGGACAGTACCG TERM 3747 2830809 - 2830771 - f 77 -11 -3.27774 | opp_overlap 2830778, overlap 2830801 CACGCCAACGATTAA TGGTACAGGTGAACCGGG TTC CACAGTACACCTGTATCA GAATGGCGCCCGGAT TERM 3748 2831543 - 2831518 - f 79 -10.5 -3.61268 | gap 1, overlap 2831521 GAGCGAAGGGTTAAA CATCC-TGACGG CCA CCGCCACGGATG CCGCAGGCAATAGTA TERM 3749 2833691 - 2833671 - f 73 -10.3 -3.01791 | overlap 2833674 ATCCGGCGGGCAATA CCAGCGCGG TCT CCGCGCCGT GGACGATCGTGGTCG TERM 3750 2833688 - 2833674 - f 78 -12.8 -2.73875 | overlap 2833671 CGGCGGGCAATACCA GCGCGG TCT CCGCGC CGTGGACGATCGTGG TERM 3751 2836329 - 2836319 - f 73 -4 -4.77173 | TGCCGACAAAACAAA TTGA AGG TCAA CTCATTAACGTGACG TERM 3752 2836978 - 2836950 - f 83 -13.2 -3.21416 | gap 1, opp_overlap 2836963 CACCGCCATCACCAA CGCCAA-CGGCGT CAGT ACGCCGGTCGGCG CGGGCGGCGTGGATA TERM 3753 2837824 - 2837811 - f 75 -9.5 -3.64487 | CTACACGCTGAAGAA CGGCG TCGG CGCCG ACAGCATTAAAACGC TERM 3754 2838727 - 2838714 - f 75 -6.7 -4.46615 | CAGTACCAACCAAAA CGATG TTCT CATCG GCTCCGCCTATGGCG TERM 3755 2839086 - 2839061 - f 100 -16.9 -5.24129 | GCGGTTGATAAAAAA GCCCCGAACGC CACG ACGTTCGGGGC AACAAGCGGTGATAT STM2690 2839118 - 2840527 + | putative outer membrane efflux protein TERM 3756 2841525 - 2841505 - g 100 -7.5 -5.78622 | GCACTGCAAAAAAAA CTGGCTGTC CTC GCCAACCAG GCCGCCCACGAAGCG TERM 3757 2841604 - 2841615 + G 74 -7.2 -4.16016 | opp_overlap 2841595 2841612 ATTAAACTGATGCAG GCGG AGAA CCGC TTTCTTCAGCAGTGG STM2691 2840524 - 2842704 + | putative ABC transporter transmembrane region STM2692 2842712 - 2843875 + | HlyD family secretion protein TERM 3758 2844047 - 2844032 - T 79 -3.2 -5.4477 | overlap 2844034 AAAGCCGCAAAAAAA TAGTCG CAAA CGACGA AACCTACGCTTTAGC TERM 3759 2844346 - 2844317 - T 100 -9.3 -4.93877 | opp_overlap 2844320, overlap 2844320 CTCCACCAAATAAAA CAAGGGGTTACGT GAAA ACGTAGCCCCTTT TTCTTTGGTAGTGGC TERM 3760 2844320 - 2844343 + T 100 -13.2 -5.34309 | opp_overlap 2844317 2844320 CACCAAATAAAACAA GGGGTTACGT GAAA ACGTAGCCCC TTTTTCTTTGGTAGT TERM 3761 2844343 - 2844320 - T 95 -11 -4.56436 | opp_overlap 2844320, overlap 2844317 CACCAAATAAAACAA GGGGTTACGT GAAA ACGTAGCCCC TTTTTCTTTGGTAGT TERM 3762 2844420 - 2844404 - T 90 -7.2 -5.4505 | opp_overlap 2844404 GGCGGCAACAAAAAA CCCGCC ATTAA AGCGGG TTCTGTTCAGAAACT STM2694 2844645 - 2844427 - | late control-like protein STM2695 2845814 - 2844714 - | late control-like protein TERM 3763 2844922 - 2844940 + g 70 -3 -4.7254 | opp_overlap 2844915 2844910 GAAGCAACCCCGCGC TGCAGGCG TTC CCACTGCA TTTTTGCTGCGCGCT TERM 3764 2845209 - 2845231 + g 79 -11.3 -3.7104 | gap 1, opp_overlap 2845208 2845209 CGTGATGGTGATAAC CGGC-AGCGG CTTG CCGCTTGCCG TTCTTCCCTGTCCCT STM2696 2846296 - 2845811 - | putative phage tail protein STM2697 2849100 - 2846293 - | phage tail-like protein TERM 3765 2849073 - 2849086 + g 71 -8.1 -3.82824 | opp_overlap 2849073 2849070 CCGCATTAAGAATCA CCTGC AGAC GCAGG TTATTGTCACTCATC STM2698 2849212 - 2849093 - | gpE-like protein STM2699 2849529 - 2849227 - | putative phage tail-like protein TERM 3766 2849576 - 2849551 - R 77 -8.9 -3.90291 | overlap 2849553 2849554 ATCCTGTTAATGAAA TACTGGCGCGG CTGC CCGCGCCGTTA AGGTTAATCAGAGGC TERM 3767 2849573 - 2849553 - R 79 -10.4 -3.54146 | gap 1, overlap 2849551 2849554 CCTGTTAATGAAATA CTGGCGCGG CTGC CCGCGCC-G TTAAGGTTAATCAGA TERM 3768 2849573 - 2849554 - R 71 -10.6 -2.72166 | overlap 2849553 2849551 CTGTTAATGAAATAC TGGCGCGG CTGC CCGCGCCG TTAAGGTTAATCAGA STM2700 2850099 - 2849584 - | phage tail fiber-like protein STM2701 2851281 - 2850109 - | phage tail sheath-like protein TERM 3769 2851331 - 2851343 + rH 70 -9.1 -3.37755 | overlap 2851329 GTTCTGGTTGCCAGG CGTGC GGC GCACG TATTTCACGATGTGT STM2702 2851941 - 2851384 - | DNA invertase-like protein TERM 3770 2851525 - 2851574 + gH 84 -10.5 -3.9243 | AGTGAGCTTTGGACG CCTGCCACCGACTCGCCCTTGCG CCCT CGCAGCGGCAAGTCCGGCGCGGG TTCTTTCCACAATTA STM2703 2851911 - 2852990 + | hypothetical protein STM2704 2852997 - 2853404 + | tail fibre assembly-like protein STM2705 2854025 - 2853408 - | hypothetical protein STM2706 2855569 - 2853995 - | phage tail-like protein TERM 3771 2854429 - 2854465 + gr 100 -7.3 -6.23545 | ATAAATTAAACGTGG CTGTCATTGTCGAATTA TTA TTACTCGTCAGTGACAG TTTTTTTTCTTTGCC STM2707 2856171 - 2855566 - | phage tail-like protein TERM 3772 2855984 - 2855957 - G 80 -4.7 -4.99035 | opp_overlap 2855976 TGATGGATATAAAAA GCGTCCTGCAC AACGCG GCGCTTGACGC TTTCTGTCCAGCTCT STM2708 2857072 - 2856164 - | phage tail-like protein STM2709 2857418 - 2857059 - | base plate tail-like protein STM2710 2857993 - 2857415 - | phage baseplate assembly-like protein TERM 3773 2858099 - 2858062 - R 79 -10.5 -3.52906 | gap 1, opp_overlap 2858060, overlap 2858025 2858021 2858060 GCAGTGGCACAAAGA TCACCC-CGCCAGCCAGC GCA GCAGGGTGTCGCGGGTGA CGGTTTCCACTTCTT STM2711 2858508 - 2858062 - | phage tail-like protein STM2712 2858932 - 2858501 - | phage tail-like protein STM2713 2859179 - 2858895 - | hypothetical protein STM2714 2859456 - 2859028 - | lysis-like protein STM2715.S 2860309 - 2859833 - | prophage lysozyme STM2716 2860538 - 2860323 - | phage-holin-like protein STM2717 2860745 - 2860542 - | phage tail-like protein STM2718 2861209 - 2860745 - | head completion-like protein TERM 3774 2861318 - 2861342 + r 79 -2.9 -5.42198 | overlap 2861320 TTAGCGGCTGTCATT GC-GCAGTCTG CGCTC CAG-CTGCTGC TTTTCTTTTTTCACA STM2719 2861956 - 2861303 - | terminase-like protein TERM 3775 2861542 - 2861529 - G 71 -5.9 -4.26344 | AGATCGGCATCAAAA CCGGC AGCG GCCAG CAGAGCGCTTTGCGC STM2720 2863042 - 2861960 - | major capsid-like protein TERM 3776 2862457 - 2862483 + g 71 -6.4 -4.26076 | overlap 2862452 2862450 CTACTTTTACCGGCT CCGCAGTAGTGG TGC CGTCTTCTGCGG TTTTACTGCCCATAA STM2721 2863892 - 2863059 - | capsid scaffold-like protein TERM 3777 2864459 - 2864439 - g 71 -6.2 -4.28375 | gap 1, opp_overlap 2864438 TGAACAGATCGAAAA GC-TGGAAG AAGT CTTCCACGC CTCTATGTTCGACTA TERM 3778 2864528 - 2864550 + G 77 -4 -5.08255 | overlap 2864529 TCCGCAACCTGCTCA AGTCGCGCCA GAT TGGTGCCACG TTTTATTTTGCCCGT TERM 3779 2865427 - 2865417 - g 70 -3.2 -4.7373 | GGACGCTATCAAAAA GCTA ACG CAGC AGTACAACGTGACCT STM2722 2864035 - 2865801 + | terminase-like protein STM2723 2865801 - 2866841 + | portal vertex-like protein TERM 3780 2866873 - 2866851 - T 100 -15 -4.3207 | ATATAAATATAGAAA GAGTGCCTTT AAC AAAGGCACTC ACCTCATAATATATC STM2724 2868678 - 2866927 - | hypothetical protein TERM 3781 2867464 - 2867481 + g 86 -4.1 -5.37865 | TTGTCCTTCATATGT GTCAAAG TACG CTTCGAC TTTTTTAATTATTGG TERM 3782 2868364 - 2868351 - G 74 -3.1 -4.85599 | opp_overlap 2868351 TTGATTGTATAAAAA CGATA TCGA CATCG TGATTTTTACGTTGA TERM 3783 2868787 - 2868768 - R 100 -15 -4.20084 | ATGATCTACGCAAAA GCCCGCCA GAAC TGGCGGGC CTTAACACAAAAGAT STM2726 2869623 - 2868892 - | hypothetical protein TERM 3784 2869630 - 2869602 - G 78 -6 -4.72272 | overlap 2869605 TTTCTTGACGAAAAA CAAGGCGATATC TGATT GACATCGCCTCT CACTCATATGTAACC TERM 3785 2869627 - 2869605 - G 88 -9.9 -4.47707 | overlap 2869602 CTTGACGAAAAACAA GGCGATATC TGATT GACATCGCC TCTCACTCATATGTA STM2727 2869988 - 2869683 - | hypothetical protein STM2728 2870115 - 2869927 - | hypothetical protein TERM 3786 2870176 - 2870142 - R 72 -8.8 -3.4878 | opp_overlap 2870142 2870144 2870151 TGACACCACAAGCAA TACTGTACATATAACC ACT GTTTATATTTACAGTA TATAATAATCTTACT STM2729 2872697 - 2870268 - | hypothetical protein TERM 3787 2871911 - 2871930 + g 71 -4.8 -4.56597 | opp_overlap 2871910 2871911 GGATCAGTTCATAAG GCACCGGC TTAC GGCGGCGC TTTTTGCGGCGCAAC STM2730 2873545 - 2872688 - | DNA adenine methylase-like protein TERM 3788 2873106 - 2873135 + g 74 -2.9 -4.98255 | gap 1, overlap 2873109 GCTTTTTCTGCAAAT GCACGTATTTCGTT TTC AGGGAAGTACG-GC TTTTTATAATTACCG TERM 3789 2873471 - 2873445 - G 78 -12.2 -3.17941 | opp_overlap 2873444 2873443 ATCACAGCGCATGAA CCCGCGAAAGGT TCA ACCAGTCGCGGG CCTTCTGGGAGGTGT TERM 3790 2873497 - 2873511 + g 83 -7.8 -4.63218 | overlap 2873506 GGTGTTTTTTCAGTT CTGCCA TGA TGGCGG TTTTATTACCCGCCC STM2731 2873769 - 2873542 - | hypothetical protein STM2732 2874002 - 2873769 - | hypothetical protein STM2733 2874411 - 2874070 - | hypothetical protein STM2735 2875270 - 2875037 - | hypothetical protein STM2734 2874631 - 2875089 + | hypothetical protein STM2736 2875787 - 2875278 - | hypothetical protein STM2737 2876062 - 2875823 - | hypothetical protein TERM 3791 2876455 - 2876445 - g 70 -3.2 -4.7339 | overlap 2876452 AAGAAATCTCAAAAA CGAA ACC TCCG TCACGGTAAGACCAC STM2738 2876179 - 2876811 + | hypothetical protein STM2739 2876815 - 2877840 + | phage tail-like protein TERM 3792 2878039 - 2878064 + F 100 -10.5 -5.49234 | opp_overlap 2878039 ATGAACCTTAAAAAA GCCTGTAACTT CAAT GAGTTGCAGGC TTTTTTGTTGCATGT TERM 3793 2878064 - 2878039 - f 91 -7.6 -5.10029 | opp_overlap 2878039 ATGAACCTTAAAAAA GCCTGTAACT TCAATG AGTTGCAGGC TTTTTTGTTGCATGT TERM 3794 2878484 - 2878466 - g 84 -6 -5.09204 | overlap 2878467 2878470 ATAGCTGAAGAAAAA CGCATCCA GAA TGAATGCA CGCTGGAAAAAGTTG STM2740 2878169 - 2879233 + | integrase-like protein STM2740.1N 2879247 - 2879414 + | hypothetical protein STM2741 2879461 - 2880054 + | putative periplasmic protein TERM 3795 2880114 - 2880101 - f 72 -5.3 -4.72029 | opp_overlap 2880110 2880111 GCGAACCGAATAAAA TCTGA AAGC TCAGA CGTATAGTCTGCTTC STM2742 2880444 - 2881637 + | putative cytoplasmic protein STM2743 2882799 - 2881972 - | putative cytoplasmic protein STM2744 2883250 - 2883465 + | putative cytoplasmic protein STM2745 2883501 - 2885570 + | putative inner membrane protein STM2746 2886073 - 2887356 + | putative ATPase STM2747 2887401 - 2888219 + | putative cytoplasmic protein TERM 3796 2888282 - 2888243 - T 74 -5.8 -4.70383 | opp_overlap 2888249 2888271, overlap 2888249 2888271 ATTCAAAAAAAAATA GCGAAATACACCGTTTCA ATAC CGAAATGGTGTATTTTTC AGAAAAAAAACCACC TERM 3797 2888249 - 2888276 + T 89 -9.3 -4.56597 | opp_overlap 2888243 2888249 2888271, overlap 2888271 AAAAAAATAGCGAAA TACACCGTTTC AATACC GAAATGGTGTA TTTTTCAGAAAAAAA TERM 3798 2888276 - 2888249 - T 71 -7.8 -3.9223 | opp_overlap 2888249 2888271, overlap 2888243 2888271 AAAAAAATAGCGAAA TACACCGTTTCA ATAC CGAAATGGTGTA TTTTTCAGAAAAAAA STM2748 2888729 - 2888373 - | putative transcriptional regulator STM2749 2888824 - 2889108 + | putative cytoplasmic protein STM2750 2889221 - 2889742 + | putative PTS system glucitol/sorbitol-specific enzyme II STM2751 2889739 - 2890113 + | putative glucitol-specific PTS enzyme III STM2752 2890110 - 2891090 + | putative glucitol-specific PTS enzyme III TERM 3799 2891529 - 2891517 - g 80 -9.1 -4.19506 | AGCCGAACTGGAAAA TCCGG AGA CCGGA TGCATCCTGCGCGGC STM2753 2891101 - 2892114 + | putative dehydrogenase TERM 3800 2892144 - 2892120 - f 86 -9.2 -4.43208 | opp_overlap 2892120, overlap 2892121 AGATGTTTAAACAAA CGGCGCAGGG TAGCT CCCTGTGCCA GTTCCATATGATTTT TERM 3801 2892143 - 2892121 - f 74 -10.5 -3.25202 | opp_overlap 2892120, overlap 2892120 GATGTTTAAACAAAC GGCGCAGGG TAGCT CCCTGTGCC AGTTCCATATGATTT STM2754 2892409 - 2893611 + | putative hexulose 6 phosphate synthase TERM 3802 2893678 - 2893657 - T 84 -13.7 -2.93783 | overlap 2893654 AAAAGTGTGAAATCA GGCGCAGAG TTCC CCCTGCGCC TTCACCTCAGTGATG STM2755 2894320 - 2893685 - | putative hexulose 6 phosphate synthase STM2756 2894907 - 2894344 - | putative sugar phosphate aminotransferase STM2757 2895749 - 2894907 - | putative cytoplasmic protein TERM 3803 2895023 - 2895007 - G 72 -3.5 -4.73108 | CCCAGAAAATGAAAA CGTTCCG GTG CGGCGCG GTAGCGCTGGTAAAG STM2758 2897420 - 2895879 - | putative phosphotransferase system IIC component TERM 3804 2897149 - 2897127 - G 80 -5.4 -4.93365 | overlap 2897128 2897129 GTTCATAATCAAAAA CCCGGCGATC GCC GACAGCCCGG CAATGCCCTGATCGT TERM 3805 2897342 - 2897326 - G 75 -6.5 -4.44284 | overlap 2897336 2897338 AAGCTAACACCAAAA GCCAGCA AAA TACCGGC GGCAGGCAGCATGGC TERM 3806 2897539 - 2897567 + H 77 -9 -3.86015 | opp_overlap 2897532 2897531 2897537 2897540, overlap 2897540 CCAAAGACGAAAGTT ATTTCCGGTTTT CGCTT AAAACCGGAAAA TTTATGAGGGCAATC TERM 3807 2897566 - 2897540 - H 78 -12.5 -2.7213 | opp_overlap 2897539 2897540, overlap 2897532 2897531 2897537 CAAAGACGAAAGTTA TTTCCGGTTTT CGCTT AAAACCGGAAA ATTTATGAGGGCAAT TERM 3808 2897540 - 2897566 + H 79 -12.5 -2.91395 | opp_overlap 2897532 2897531 2897540 2897537, overlap 2897539 CAAAGACGAAAGTTA TTTCCGGTTTT CGCTT AAAACCGGAAA ATTTATGAGGGCAAT STM2759 2897643 - 2899322 + | putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component TERM 3809 2899655 - 2899610 - f 100 -16.1 -4.59414 | opp_overlap 2899612 2899612, overlap 2899611 2899614 TCAGAACAATTAAAA TCTACACCCGCAAAGGCTCGC TTTA GCGAGCCTTTGCGGGCGGCAT TTCTGGATAATTATC TERM 3810 2899654 - 2899611 - f 100 -19.6 -3.34564 | opp_overlap 2899612 2899612, overlap 2899610 2899614 CAGAACAATTAAAAT CTACACCCGCAAAGGCTCGC TTTA GCGAGCCTTTGCGGGCGGCA TTTCTGGATAATTAT TERM 3811 2899612 - 2899654 + F 100 -17.1 -3.95555 | gap 1, opp_overlap 2899611 2899610 2899614, overlap 2899612 AGAACAATTAAAATC T-ACACCCGCAAAGGCTCGC TTTA GCGAGCCTTTGCGGGCGGCA TTTCTGGATAATTAT TERM 3812 2899612 - 2899653 + F 100 -18.7 -2.9661 | opp_overlap 2899611 2899610 2899614, overlap 2899612 AGAACAATTAAAATC TACACCCGCAAAGGCTCGC TTTA GCGAGCCTTTGCGGGCGGC ATTTCTGGATAATTA TERM 3813 2899651 - 2899614 - f 100 -27.9 -2.82152 | opp_overlap 2899612 2899612, overlap 2899611 2899610 AACAATTAAAATCTA CACCCGCAAAGGCTCGC TTTA GCGAGCCTTTGCGGGCG GCATTTCTGGATAAT TERM 3814 2900484 - 2900469 - g 90 -5.4 -5.23316 | gap 1 CAGGATATGAAAAAA CTG-GCG CAC CGCGCAG GTGGCAGCCACAAAA STM2760 2900439 - 2901314 + | putative integrase STM2761 2901480 - 2903354 + | putative inner membrane protein STM2762 2904897 - 2903614 - | putative inner membrane protein TERM 3815 2905347 - 2905372 + r 100 -14.7 -5.15381 | opp_overlap 2905347 2905338 2905362 AATGAAGTCTACTAA GCCCGCACAGC ACAA GCTCTGCGGGC TTTTTTACGTCTATT TERM 3816 2905372 - 2905347 - R 90 -14.7 -3.19425 | opp_overlap 2905347, overlap 2905338 2905362 AATGAAGTCTACTAA GCCCGCACAGC ACAA GCTCTGCGGGC TTTTTTACGTCTATT STM2765 2907332 - 2907066 - | putative transposase TERM 3817 2907777 - 2907762 - R 77 -11.8 -2.80016 | opp_overlap 2907762, overlap 2907759 TCCCATTACTAATGA GCGCCC AACA GGGCGC TTGTGAATCAGGTCA TERM 3818 2907762 - 2907777 + r 82 -11.8 -3.36327 | opp_overlap 2907759 2907762 TCCCATTACTAATGA GCGCCC AACA GGGCGC TTGTGAATCAGGTCA STM2766 2908423 - 2907785 - | putative cytoplasmic protein STM2767 2910402 - 2908420 - | putative DNA/RNA helicase TERM 3819 2910318 - 2910328 + g 75 -6.8 -4.46854 | overlap 2910308 GTTTTTTATGCTGCT CAGC ATA GCTG TTTATTATTACATCA STM2768 2910681 - 2910980 + | putative transposase STM2769 2910977 - 2911843 + | putative transposase fljA 2913162 - 2912623 - | phase-1 flagellin repressor TERM 3820 2913211 - 2913194 - R 100 -9.8 -4.99134 | ATGCTAAATGAAAAA GCCCCG AATTCA CGGGGC TGAATAAAACGAAAT fljB 2914750 - 2913230 - | flagellin TERM 3821 2914328 - 2914342 + g 71 -10 -3.55622 | GATGGTCAGGGTGTT GTCCTG CGC CAGGAC TTTCACGCCGTTGAA hin 2914842 - 2915414 + | DNA-invertase Hin TERM 3822 2916272 - 2916262 - f 76 -4 -5.08824 | TTTTTACGCAAAAAA TCAT CAC ATGA TCAAGTGTCATATTA iroB 2916377 - 2917492 + | putative glycosyl transferase TERM 3823 2919292 - 2919320 + G 70 -5.2 -4.4017 | overlap 2919294 GCAAGGTGTCCGACG TTTCGCTCGCTG ATGAG CGGCGAGGGGGA TTTTCTCGCCCTTGC iroC 2917573 - 2921226 + | putative ABC transporter protein TERM 3824 2921265 - 2921287 + F 95 -13.5 -3.77831 | opp_overlap 2921257 2921259 2921258 AAAGAAAGCCCGCAA GCGGCTGTT CATGT AACAGCCGC TTTAGCTATTGATAC TERM 3825 2922494 - 2922473 - g 76 -5.1 -4.72986 | gap 1 CAGTTGCATGAAAAA TTGCG-CGCC GCC GGCGTCGAAA GCCATTACAGCGTGT iroD 2921336 - 2922580 + | enterochelin esterase=-like protein TERM 3826 2922636 - 2922656 + G 78 -6.1 -4.79667 | opp_overlap 2922635 2922638, overlap 2922638 2922652 CGCCAGTACCACAAC AAGCGCTAT CGC ATGGCGCTA TTTTTAGTGAGTTTT TERM 3827 2922638 - 2922654 + G 76 -8.7 -3.9993 | opp_overlap 2922635 2922638, overlap 2922636 2922652 CCAGTACCACAACAA GCGCTAT CGC ATGGCGC TATTTTTAGTGAGTT TERM 3828 2923116 - 2923063 - g 70 -6.5 -4.13767 | gap 1, overlap 2923044 GTTTTCATCGTAAAA CCGGCGGCGGGCCAGCGTTCCGCCAG CTA CTGGAGAGACA-TATCGCGCCGCAGG TGGAACAAGGAATAA TERM 3829 2923454 - 2923472 + G 74 -10.2 -3.58731 | overlap 2923456 GCAGCATTACCCGGG CCTGGGCC ACG GGCCCATG TTTAACGCCTCTTTT TERM 3830 2923456 - 2923470 + G 75 -11.4 -3.36341 | overlap 2923454 AGCATTACCCGGGCC TGGGCC ACG GGCCCA TGTTTAACGCCTCTT iroE 2922612 - 2923547 + | putative hydrolase TERM 3831 2923579 - 2923548 - T 71 -10.1 -3.14564 | overlap 2923561 CCACGCTGCCATTAA CCCGCCGCCAG AATATGCCCG CCAGCGGCGGG CATAATCCATCAAAA TERM 3832 2923583 - 2923561 - T 100 -17.8 -3.29043 | overlap 2923548 AACCCGCCGCCAGAA TATGCCCGCC AGC GGCGGGCATA ATCCATCAAAACGAG iroN 2925769 - 2923589 - | outer membrane receptor FepA TERM 3833 2923807 - 2923822 + g 74 -3.2 -4.87291 | overlap 2923800 CTTCACTACGCGACT CCGC ATGTGTTC GCGG TTTTTGCTTGCCGTA TERM 3834 2926283 - 2926244 - R 86 -13.8 -3.14564 | gap 1, opp_overlap 2926252, overlap 2926232 2926228 2926229 2926246 2926248 2926252 TGATGTTGGCACCAA CATACAAAGCGCCTGGTAA TAT TTATCAGGCGCTTTGCA-G ACAGAAAACCATCAA TERM 3835 2926282 - 2926246 - R 100 -17.5 -3.13522 | opp_overlap 2926252, overlap 2926228 2926229 2926244 2926248 2926252 ATGTTGGCACCAACA TACAAAGCGCCTGGTAA TAT TTATCAGGCGCTTTGCA GACAGAAAACCATCA TERM 3836 2926280 - 2926248 - R 100 -17.9 -3.12895 | opp_overlap 2926252, overlap 2926229 2926246 2926244 2926252 GTTGGCACCAACATA CAAAGCGCCTGGTAA TAT TTATCAGGCGCTTTG CAGACAGAAAACCAT TERM 3837 2926276 - 2926252 - R 95 -12.9 -4.22927 | opp_overlap 2926252, overlap 2926248 2926246 2926244 GCACCAACATACAAA GCGCCTGGTAA TAT TTATCAGGCGC TTTGCAGACAGAAAA TERM 3838 2926252 - 2926276 + r 100 -15.1 -3.53012 | opp_overlap 2926248 2926246 2926244 2926252 GCACCAACATACAAA GCGCCTGGTAA TAT TTATCAGGCGC TTTGCAGACAGAAAA TERM 3839 2926734 - 2926755 + r 71 -7.3 -4.10566 | opp_overlap 2926731, overlap 2926749 GTAAATAATTTACTC TCAGCTACT ATTC AGTAGCAGA TTGTTATTCTTACAT pipB2 2927854 - 2926802 - | secreted effector protein TERM 3840 2927602 - 2927618 + g 71 -5.9 -4.36914 | overlap 2927604 CACGACACCCATCCA TATCATC CAG GATGATG TTTTCTGGCAACGGA TERM 3841 2928730 - 2928711 - g 77 -3.5 -5.13016 | overlap 2928713 AAGTAAAATTAAAAA GATCCTC CTGTCC GAGGAAC AAATCTTACTCGCTC virK 2928373 - 2929302 + | virulence protein TERM 3842 2930330 - 2930314 - g 85 -6.6 -4.8622 | TGGTGCAATTAAAAA TGAGTG CAGGC CACTCA GTCCCGGCAGCATAC mig-14 2929595 - 2930491 + | putative transcriptional activator TERM 3843 2930531 - 2930499 - T 88 -8.5 -4.85782 | opp_overlap 2930500 2930501, overlap 2930500 2930501 TTTGCTAAAAAGAAA GCCTGGACGTAAATA TGT TTTTTACGTCCAGAT TTTTCATAAATCCTG TERM 3844 2930500 - 2930530 + T 100 -9.8 -4.75372 | opp_overlap 2930500 2930499 2930501, overlap 2930501 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGTCCAGA TTTTTCATAAATCCT TERM 3845 2930530 - 2930500 - T 86 -12 -3.50746 | opp_overlap 2930500 2930501, overlap 2930499 2930501 TTGCTAAAAAGAAAG CCTGGACGTAAATA TGT TTTTTACGTCCAGA TTTTTCATAAATCCT TERM 3846 2930529 - 2930501 - T 81 -13.3 -2.69725 | opp_overlap 2930501 2930500, overlap 2930500 2930499 TGCTAAAAAGAAAGC CTGGACGTAAATA TGT TTTTTACGTCCAG ATTTTTCATAAATCC TERM 3847 2930501 - 2930529 + T 86 -13.3 -3.445 | opp_overlap 2930500 2930499 2930501, overlap 2930500 TGCTAAAAAGAAAGC CTGGACGTAAATA TGT TTTTTACGTCCAG ATTTTTCATAAATCC nixA 2932226 - 2931213 - | putative nickel transporter TERM 3848 2931866 - 2931856 - G 87 -2.4 -5.67063 | GCCAGCAGAAAAAAA GCGG AAA CAGC CGTACCAATCAACGA TERM 3849 2932006 - 2931987 - G 93 -4.2 -5.64006 | opp_overlap 2931995 ACCCAATGAAAAAAA CGCCCCCA CGCC TAAAGGCG TTTTACCCTGCTGCA TERM 3850 2931995 - 2932006 + g 74 -7.2 -4.15565 | opp_overlap 2931987 AAAAAAACGCCCCCA CGCC TAAA GGCG TTTTACCCTGCTGCA tctE 2933774 - 2932359 - | regulatory protein TERM 3851 2932986 - 2932996 + g 90 -8.2 -4.68593 | opp_overlap 2932985, overlap 2932964 2932966 CTGCGTTTTTAACAC CGCC AGC GGCG TTTTTAACTGGTGAG tctD 2934435 - 2933761 - | regulatory protein TERM 3852 2933828 - 2933838 + g 82 -5.4 -5.02074 | GTAATTCGTACATCG CTTC CCT GAAG TTTTTTACGCAGTCG TERM 3853 2934357 - 2934367 + g 77 -8.2 -4.07687 | CAAATACGCAGTCCA CGGC AAA GCCG TTTTGCACCAGCGCT TERM 3854 2935465 - 2935447 - g 83 -7.3 -4.63527 | opp_overlap 2935446 2935447 CGACGAGTTTAAAAA GCAGCGC GATCT GCGCGGC CTGTTTGAGTTCGAC STM2786 2934590 - 2935567 + | tricarboxylic transport STM2787 2935579 - 2936013 + | tricarboxylic transport TERM 3855 2936426 - 2936483 + G 73 -5.6 -4.62336 | overlap 2936434 ATCATTCTGTTCGCC CCTTTACTGGCGCAATGGT-CGCTGGCC TTTG GGCCGGCGGAATATTTCGCCT-TAATGG TTTTTGCCATCGCCT TERM 3856 2936434 - 2936476 + G 75 -11.3 -3.4158 | gap 1, overlap 2936426 GTTCGCCCCTTTACT GGCGCAATGGT-CGCTGGCC TTTG GGCCGGCGGAATATTTCGCC TTAATGGTTTTTGCC STM2788 2936024 - 2937538 + | tricarboxylic transport TERM 3857 2938135 - 2938097 - g 81 -8 -4.25104 | opp_overlap 2938107 2938109, overlap 2938117 2938118 CGCTGTTGATCAAAA CGCTCCTCAACCGTGCAC AAG GCGCGCTGTTGATCAGCG CCGAAGGGATCGATG STM2789 2937841 - 2938818 + | hypothetical protein TERM 3858 2939474 - 2939490 + G 91 -7.2 -4.84311 | CGGCTGGTCAAAATG CTGGGC GTGGA GCCCGG TTTTATTATCTGCCC TERM 3859 2939583 - 2939593 + G 71 -8.2 -3.87994 | ACCCGATCCCCGATC CGGC AAT GCCG TTTCTCGGCGTCCAT ygaF 2938844 - 2940112 + | hypothetical protein TERM 3860 2940331 - 2940298 - g 71 -10.9 -3.16564 | gap 1 GCGCGACGCCATCAA CGC-CGCCAATCGCGC CCT GCCCGCCTGGCGCGCG CTCACCGCCAAAGAG gabD 2940134 - 2941582 + | succinate-semialdehyde dehydrogenase I TERM 3861 2941972 - 2941958 - g 70 -7.1 -4.10855 | overlap 2941947 AAAACGCGGTGAAAA TCGCC CGCGC GGCGA CAAAACGCAGCGGCG gabT 2941597 - 2942880 + | 4-aminobutyrate aminotransferase TERM 3862 2942964 - 2942913 - f 85 -14 -3.05384 | opp_overlap 2942906 CGGGTGGCGACGTAA CTGTCTTATCCGGCCTACAA AAACCGTTTCGA TTGTAGGCCGAATAAGCCAG GCGCCATCCGGTAAA TERM 3863 2943511 - 2943536 + G 74 -3.1 -4.89852 | overlap 2943512 2943534 ATTCTGGCGTTTATC GCGCTGGGCGC GACG GCGATTAGCGG TTTTTATCCGTATGC gabP 2943010 - 2944410 + | gamma-aminobutyrate transporter TERM 3864 2944935 - 2944949 + G 71 -4.2 -4.57304 | CGCTTATTTGACCTG GCGG CCCGCTA CCGC TTTATTTGGTTACGT TERM 3865 2945089 - 2945068 - g 70 -10.1 -3.37344 | overlap 2945069 GCGCCAGCGAATTAA TGCGTCAGC ATTT GCTGACGCC GATTCCCATTATTCG TERM 3866 2945088 - 2945069 - g 78 -13.6 -2.62192 | overlap 2945068 CGCCAGCGAATTAAT GCGTCAGC ATTT GCTGACGC CGATTCCCATTATTC ygaE 2944452 - 2945129 + | DNA-binding transcriptional regulator CsiR ygaU 2945600 - 2945151 - | hypothetical protein TERM 3867 2945320 - 2945310 - G 70 -5.4 -4.4009 | overlap 2945312 TTTTACGGTATAAAA CTGA CTT TCAG CCGCCGGCGTCGTGG TERM 3868 2945477 - 2945488 + g 91 -7.2 -4.93288 | TCACTTTGTCAGCGT CGGG TATT CCCG TTTTATTTAAATGTT TERM 3869 2945686 - 2945669 - R 90 -14.1 -3.31263 | AGGTTATCCTGATAA GCGGCGC TTAT GCGCCGC CGGTGGCCGGTAATT yqaE 2945858 - 2945700 - | putative transport protein TERM 3870 2945910 - 2945898 - H 78 -6.3 -4.58395 | GTCATTGTTTAAAAA GAGAT TTT ATCTC TAAGCATAGTCAGTT TERM 3871 2945944 - 2945954 + H 76 -8.2 -4.18094 | overlap 2945943 CTGAGCCTGCCAGTC GCGC GCC GCGC TTTTACCCTCCTTTA STM2797 2946041 - 2946340 + | putative regulatory protein ygaP 2946350 - 2946877 + | putative rhodanese-like sulfurtransferase stpA 2947626 - 2947225 - | DNA binding protein, nucleoid-associated TERM 3872 2948104 - 2948085 - H 93 -9.4 -4.86033 | opp_overlap 2948085 2948084 AAATCGCCAGAAAAA CAATGCAT TATA ATGCATTG ATTTAAAAGTAATTA STM2800 2948325 - 2948774 + | putative inner membrane protein TERM 3873 2948782 - 2948806 + T 100 -15.7 -4.35675 | opp_overlap 2948779, overlap 2948783 AGGCGTAAGTTAGCG TCGCGACTGGC ATT GCCAGTCGCGC TTTTAGTCGGTTTTT TERM 3874 2948783 - 2948805 + T 100 -19.2 -3.19778 | opp_overlap 2948779, overlap 2948782 GGCGTAAGTTAGCGT CGCGACTGGC ATT GCCAGTCGCG CTTTTAGTCGGTTTT ygaC 2949159 - 2948809 - | hypothetical protein ygaM 2949309 - 2949647 + | hypothetical protein STM2803 2951065 - 2949731 - | putative regulatory protein STM2804 2951154 - 2951585 + | putative cytoplasmic protein STM2804.1n 2951582 - 2951758 + | hypothetical protein TERM 3875 2951808 - 2951827 + F 78 -6.3 -4.67635 | opp_overlap 2951798 2951807 CAACACACGACAATC CGACGCG TTTCAT CGCGCCG TTTTCTCATTTTAAA nrdH 2951857 - 2952102 + | glutaredoxin-like protein TERM 3876 2952253 - 2952290 + GF 70 -3.4 -4.68593 | overlap 2952256 CGTCATACGGCGGCG GCGGGATGGCCGGT-GCG GTGC CGCGACAGGTGATCC-GC TTTTTAAATGATGAA nrdI 2952099 - 2952509 + | ribonucleotide reductase stimulatory protein TERM 3877 2953088 - 2953105 + GF 100 -10.5 -4.80882 | opp_overlap 2953088 CTGCAACTCTCCAAA CGCGGCG GCGG CGTCGCG TTTTTACTCTCCAAT TERM 3878 2953229 - 2953250 + GF 73 -7.9 -4.0641 | gap 1, opp_overlap 2953223, overlap 2953230 GCCAACCAACTTGGC GCGCGCCAGG GGG CC-GGCGCGG TTTATCTCCATGCGC TERM 3879 2953230 - 2953249 + GF 75 -11.4 -3.03525 | gap 1, opp_overlap 2953223, overlap 2953229 CCAACCAACTTGGCG CGCGCCAGG GGG CC-GGCGCG GTTTATCTCCATGCG TERM 3880 2953362 - 2953323 - gf 79 -2.9 -5.14965 | gap 1 ACGCTGACGAAAAAA TCC-GGATCAAAACGC TCTCTCTCG GCGTGGTGATCCCGGA TATCACCTTCCGGCT TERM 3881 2953404 - 2953390 - gf 74 -2.7 -4.86731 | opp_overlap 2953391, overlap 2953391 2953399 GCTGGCGAAAGAAAA CGCGC AAATG GCGCT CTTTTCGCCCTATGA nrdE 2952482 - 2954626 + | ribonucleotide-diphosphate reductase subunit alpha TERM 3882 2955274 - 2955307 + G 84 -8.9 -4.2461 | opp_overlap 2955278 AAAAACTATCGGCAA TCGAGCGTGAAGAGT TAAA GCTTTTCGCGCTGGA TTTGTTGATGGAACT nrdF 2954637 - 2955596 + | ribonucleotide-diphosphate reductase subunit beta TERM 3883 2955604 - 2955635 + F 100 -13.2 -4.41616 | ATTTTTAACCTTACG GGCATGGGAAAT AACGTTAC ATTTCCCATGCC TTTATTTCAAGCAAT TERM 3884 2955709 - 2955737 + F 93 -9 -4.83593 | opp_overlap 2955700 2955709, overlap 2955711 ATACGAGTGACATTA TTCACCTGGATT CCCCC AATTCAGGTGGA TTTTTGCTGGTTGTT TERM 3885 2956393 - 2956383 - g 71 -4.6 -4.57073 | overlap 2956384 GAGCGTCGCGAAAAA GCGC TGG ACGC CTTGCGTCAGGTGGG proV 2955951 - 2957153 + | glycine betaine transporter ATP-binding subunit proW 2957146 - 2958210 + | glycine betaine transporter membrane protein TERM 3886 2958657 - 2958647 - g 93 -4.6 -5.64274 | TGATCGATAAAAAAA CCGC CGA GCAG TACAACATCACCAAT proX 2958280 - 2959275 + | glycine betaine transporter periplasmic subunit TERM 3887 2959314 - 2959298 - f 70 -9.4 -3.30124 | TTTTATGCCGGATAA GGCGCA GTTCA TGCGCC GCTATCCGGCCAACG TERM 3888 2960200 - 2960221 + G 71 -10.1 -3.53444 | gap 1, overlap 2960199 TGATTGGCCTGTTTG GC-CTGGCGG GGG CCGCCGGCGC TTTAGGCGCGCGTCC TERM 3889 2960525 - 2960541 + G 85 -11.5 -4.0371 | opp_overlap 2960525, overlap 2960526 CTCCGCCTGGCAACA TGCCGGC TGG GCCGGCG TTTGTCTGGCGGGTG TERM 3890 2960526 - 2960540 + G 81 -12.8 -3.01905 | opp_overlap 2960525, overlap 2960525 TCCGCCTGGCAACAT GCCGGC TGG GCCGGC GTTTGTCTGGCGGGT STM2812 2959440 - 2960624 + | putative inner membrane protein TERM 3891 2961181 - 2961202 + G 71 -5.9 -4.24326 | opp_overlap 2961181, overlap 2961173 2961184 GCCAGCCGTCACGAA GACTTTCCT TATC AGGAAATTC TTTTGACTCGTCTTT TERM 3892 2961184 - 2961199 + G 71 -6.2 -4.22883 | opp_overlap 2961181, overlap 2961181 2961173 AGCCGTCACGAAGAC TTTCCT TATC AGGAAA TTCTTTTGACTCGTC emrR 2961121 - 2961651 + | transcriptional repressor MprA TERM 3893 2961699 - 2961722 + F 71 -7.4 -3.85817 | opp_overlap 2961693 ACAGGAAAGCGGACA GGCCGGCA CGCGTTAC TGCTGGCC TTTCTGACAACAGGT TERM 3894 2962097 - 2962087 - g 71 -4.6 -4.58283 | overlap 2962096 CAAGCGTTTGAAAAA GCCA AAA CGGC GCTGGCCTCCAGTGT TERM 3895 2962202 - 2962178 - g 76 -2.8 -5.03314 | gap 1, overlap 2962179 2962200 TCGACGTGCAAAAAA CCGCCCTGGCG CAAG CGC-AAAGCGA CCTTAACCGTCGTGT emrA 2961778 - 2962950 + | multidrug resistance secretion protein TERM 3896 2963725 - 2963750 + G 83 -7.6 -4.56791 | opp_overlap 2963727, overlap 2963718 2963728 GATCGTCTGGGAACT GACCGACGAT CACCCT ATCGTCGATC TTTCTCTTTTTAAAT emrB 2962967 - 2964505 + | putative multidrug transport protein TERM 3897 2964534 - 2964519 - T 86 -9 -4.41206 | opp_overlap 2964519 AACTATCTGATAAAA GGGATC TGCG GATCCC TTTTTTAGTAGACCA TERM 3898 2964519 - 2964534 + T 100 -9 -5.14563 | opp_overlap 2964519 AACTATCTGATAAAA GGGATC TGCG GATCCC TTTTTTAGTAGACCA STM2816 2965924 - 2964554 - | putative glycoporin TERM 3899 2965082 - 2965065 - G 75 -6.2 -4.56775 | ATCGCCGTTGAAAAA CGCCCG TTTTGC CAGGCG ATAACCGGACGGACG TERM 3900 2966217 - 2966235 + r 72 -8.8 -3.55122 | opp_overlap 2966217, overlap 2966213 TTAAGCAATAAAAAA CCCCGG CCATAAA CCGGGG TTAATTTAAATACTG TERM 3901 2966235 - 2966217 - R 100 -10.2 -5.5604 | opp_overlap 2966217 2966213 TTAAGCAATAAAAAA CCCCGGCC ATA AACCGGGG TTAATTTAAATACTG TERM 3902 2966276 - 2966290 + r 83 -4.2 -5.27335 | opp_overlap 2966277, overlap 2966277 CAAATAAGACTAAAT ATGCAG TTC CTGCAG TTTTTCTTTCGGCAG luxS 2966785 - 2966270 - | S-ribosylhomocysteinase TERM 3903 2966538 - 2966528 - G 77 -8.2 -4.18494 | overlap 2966515 2966529 CAGGCTCATGTAAAA GCCG GTG CGGC AGCCCATCGGCGAGA TERM 3904 2966683 - 2966715 + g 71 -4.7 -4.56597 | opp_overlap 2966681 AACGCAGATCAAACA CGGTGATTGCGTCGC CAT GCGGGGTGTTCATCG TTTTTGCAACCCGGA TERM 3905 2966903 - 2966921 + r 100 -14.6 -5.48213 | opp_overlap 2966900 CAGCGATGAAATTTT GGCCACTC CGT GAGTGGCC TTTTTCTTTTGGGTC gshA 2968491 - 2966935 - | glutamate--cysteine ligase TERM 3906 2967799 - 2967830 + g 74 -2.2 -5.0133 | gap 1, opp_overlap 2967788, overlap 2967802 2967821 2967828 CAAACGCAGCGACGT CGCA-TACGGCAGGT AGT ACATGCCGCAGTCCG TTTTTTCAAACGGTA yqaA 2968993 - 2968568 - | putative inner membrane protein yqaB 2969556 - 2968990 - | fructose-1-phosphatase TERM 3907 2969496 - 2969469 - G 74 -7.6 -4.09243 | gap 1, opp_overlap 2969470, overlap 2969470 CATAGCGCCCCAAAA CCTCACGCCACGC TTT GCGATGCGTG-GG TTCGGTATCCAGGAG TERM 3908 2969706 - 2969721 + r 72 -9 -3.57783 | overlap 2969694 ACTCGCCCTTCGGGC CGTTGC TGAT GCAACG TTATCCTTCTGATGC TERM 3909 2969822 - 2969840 + r 71 -9.5 -3.14211 | overlap 2969839 GGATTACTCGCCTTA CGGCTCG CCCTT CGGGCCG TTGCTGACGCAACGT TERM 3910 2969839 - 2969854 + r 72 -9 -3.54743 | overlap 2969822 2969845 GCTCGCCCTTCGGGC CGTTGC TGAC GCAACG TTATCCTTCCTGGTG TERM 3911 2970092 - 2970110 + r 71 -9.5 -3.14211 | overlap 2970109 GGATTACTCGCCTTA CGGCTCG CCCTT CGGGCCG TTGCTGACGCAACGT TERM 3912 2970109 - 2970124 + r 72 -9 -3.54743 | overlap 2970092 2970115 GCTCGCCCTTCGGGC CGTTGC TGAC GCAACG TTATCCTTCCTGGTG csrA 2971136 - 2970951 - | carbon storage regulator TERM 3913 2971319 - 2971364 + r 72 -9 -3.61089 | gap 2, opp_overlap 2971332 TTATCGTTGTCGATA GCGTTGACGTAAACGCCGCAGC ACGG GCTGCGGCGCCAACG--AACGC TTATAATTATTGCAA TERM 3914 2971353 - 2971332 - R 100 -17.3 -3.6502 | opp_overlap 2971319 TAGCGTTGACGTAAA CGCCGCAGC ACGG GCTGCGGCG CCAACGAACGCTTAT alaS 2974001 - 2971371 - | alanyl-tRNA synthetase recX 2974737 - 2974237 - | recombination regulator RecX TERM 3915 2974787 - 2974768 - R 91 -11.4 -4.26189 | opp_overlap 2974759 2974768 GGAGAAATGCCAAAA GGGCCGCA TAAA TGCAGCCC TTGATGGTAATTTAA recA 2975915 - 2974854 - | recombinase A ygaD 2976497 - 2976000 - | competence damage-inducible protein A TERM 3916 2976966 - 2976941 - R 80 -9.8 -3.89505 | gap 1, overlap 2976931 AAAAAGCCATAATAA TAGCGGAGGGG GTGCT CCCCTCC-CTA AGCGTAAATTAGCGC mltB 2978054 - 2976975 - | murein hydrolase B srlA 2978308 - 2978871 + | glucitol/sorbitol-specific enzyme IIC component TERM 3917 2979046 - 2979036 - g 71 -8.2 -3.9122 | overlap 2979037 GACGGCTTTAAAGAA GGCG AAC CGCC GGAAGCGGAGATCGG srlE 2978868 - 2979839 + | glucitol/sorbitol-specific enzyme IIB component slrB 2979851 - 2980213 + | glucitol/sorbitol-specific PTS system component IIA srlD 2980225 - 2981004 + | sorbitol-6-phosphate dehydrogenase gutM 2981080 - 2981439 + | DNA-binding transcriptional activator GutM TERM 3918 2981884 - 2981871 - g 84 -3.1 -5.30686 | gap 1, overlap 2981873 AACACCCACAAAAAA GC-GCT GAT AGCCGC AGCCGCTGTGAAATA srlR 2981637 - 2982410 + | DNA-bindng transcriptional repressor SrlR gutQ 2982403 - 2983368 + | D-arabinose 5-phosphate isomerase ygaA 2984885 - 2983365 - | anaerobic nitric oxide reductase transcription regulator TERM 3919 2985170 - 2985156 - g 86 -7.8 -4.68724 | overlap 2985157 GCACTGAATACAAAA CGCTGC GCG GCAGCA GCTATAACAGCTATC TERM 3920 2985461 - 2985447 - g 70 -7 -4.09739 | TTAAGGTGGTGAAAA CCGGCG ATA CGCTGG ATATCGGCAACGGCA STM2840 2985071 - 2986510 + | anaerobic nitric oxide reductase flavorubredoxin TERM 3921 2986932 - 2986918 - g 77 -11.4 -3.58726 | opp_overlap 2986927 2986929 2986930 GCCTGTGAGACACAA CTGCGC GAC GCGCAG CGAGTGCTGATTGTC TERM 3922 2987254 - 2987228 - g 71 -10 -3.54424 | GCTTACGCCCGGAAA CCGCTCTGGCGC GCC GCGCCGGAGTAG CCGTCAACCGCGGCG ygbD 2986507 - 2987640 + | nitric oxide reductase hypF 2989977 - 2987737 - | hydrogenase maturation protein TERM 3923 2988180 - 2988144 - G 76 -12.3 -3.12351 | gap 1, overlap 2988165 CGCCCTCATAGCTAA GCGAT-GCTGGCGCGC AGCGAA GCGCGGCAGCCACCGC GTCAAACAACCGCCC TERM 3924 2988324 - 2988310 - G 82 -11.4 -3.86346 | CCAGTCCGGCACAAA GCGCAG GCA CTGCGC CAACAGATTACGCCA TERM 3925 2989480 - 2989460 - G 74 -6.8 -4.25104 | opp_overlap 2989460 2989458 GGCTGGGCATGAAAA CGGCGATC GTACG GATCGCGG TATTCGCTGTCGCAT hydN 2990668 - 2990123 - | electron transport protein HydN TERM 3926 2990153 - 2990167 + g 87 -8.5 -4.58395 | opp_overlap 2990134 2990152, overlap 2990154 TGCCGTTGAATCCAG CGCCG CGCGA CGGCG TTTTTCCGCGCTCAG TERM 3927 2990775 - 2990804 + r 90 -15.1 -2.62616 | opp_overlap 2990791, overlap 2990763 TTTCGTGAGCATTTA CGTGTCATCGTCA CAAG TGTCGATGACACG TAATGTCGCCAGTGG STM2844 2991678 - 2990869 - | hypothetical protein hycI 2992175 - 2991705 - | hydrogenase 3 maturation protease hycH 2992578 - 2992168 - | hydrogenase 3 large subunit processing protein TERM 3928 2992271 - 2992307 + g 71 -10.1 -3.59315 | gap 1, overlap 2992274 TGCTGCTGCGGGGTC TGCGCGGCGCGCGCCT CATCAA ACGCGCGCGCCA-GCA TTTGAACATGGTTGA TERM 3929 2992274 - 2992306 + g 76 -12.7 -2.75268 | gap 1, overlap 2992271 TGCTGCGGGGTCTGC GC-GGCGCGCGCCT CATCAA ACGCGCGCGCCAGC ATTTGAACATGGTTG hycG 2993342 - 2992575 - | hydrogenase hycF 2993884 - 2993342 - | formate hydrogenlyase complex iron-sulfur subunit hycE 2995603 - 2993894 - | hydrogenase 3 large subunit hycD 2996544 - 2995621 - | hydrogenase 3 membrane subunit hycC 2998373 - 2996547 - | formate hydrogenlyase subunit 3 TERM 3930 2996619 - 2996631 + g 71 -10.5 -3.28712 | opp_overlap 2996597 2996615 2996613 ACGACGGAACAGCAC CGCGG CCG CCGCG TTCTGCCAGCCCGGA TERM 3931 2997966 - 2997948 - G 76 -12.4 -3.14211 | opp_overlap 2997947 2997948 2997950 ACCGCCGGTGAGGAA CACGGCGC AGA GCGCCATG ATTTCCGCCATCACC TERM 3932 2998323 - 2998311 - G 75 -6.9 -4.52214 | overlap 2998319 AAACGAAAACAGAAA CGCCA GAA CGGCG GCGGCGGCAAACCAC TERM 3933 2998347 - 2998319 - G 73 -10.2 -3.41528 | gap 1, overlap 2998311 ACAGAAACGCCAGAA CGGCGGCG-GCGG CAAA CCACGCGACGCCG CTAGTAATCAGTGAA hycB 2998981 - 2998373 - | hydrogenase-3 iron-sulfur subunit TERM 3934 2999103 - 2999073 - R 72 -9 -3.65542 | overlap 2999071 2999082 CCCATCCCCAAAACA TTCATGACATGGCG CAA CGCCACATCGCGAA TCAAAGCGGGCAACG hycA 2999588 - 2999127 - | formate hydrogenlyase regulatory protein HycA hypA 2999798 - 3000154 + | hydrogenase nickel incorporation protein TERM 3935 3000186 - 3000155 - f 70 -8.8 -3.40601 | gap 1 GAAACTGAAGATTAA TGCCGGATAGACG CTCGCGT CGCC-ATCCGGCA GAAAGCCTGTAACAA hypB 3000223 - 3001095 + | hydrogenase nickel incorporation protein HypB hypC 3001086 - 3001358 + | hydrogenase isoenzymes formation protein TERM 3936 3001476 - 3001499 + G 86 -7.4 -4.82855 | gap 1, opp_overlap 3001475, overlap 3001478 3001479 TGCGCATTATGGAAG TCTGCGGGGGT CAT ACCCACGC-GA TTTTTAAATTTGGTC TERM 3937 3002250 - 3002222 - g 91 -14.6 -3.05384 | opp_overlap 3002213 CTGGGCGTGATTGAA TCCTCCGGCGTC CACCT GACGCCGGAGTA TCAGCGCTTTGACGC hypD 3001358 - 3002476 + | putative hydrogenase formation protein TERM 3938 3002612 - 3002634 + G 70 -5.4 -4.38712 | AGCTGGCGCAGCTGA CGGCGGAGGG CGA CCGTCTGGCG TTTTCTACCGATAGC hypE 3002473 - 3003483 + | putative hydrogenase formation protein fhlA 3003702 - 3005780 + | formate hydrogen-lyase transcriptional activator ygbA 3006186 - 3005842 - | hypothetical protein TERM 3939 3005984 - 3006024 + g 95 -9.6 -4.72272 | opp_overlap 3005998, overlap 3005985 ATCTCCTCGCGTTTA GCCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGGG TTTTTCCTCGCCAAA TERM 3940 3005985 - 3006023 + g 84 -13.1 -3.43042 | opp_overlap 3005998, overlap 3005984 TCTCCTCGCGTTTAG CCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGG GTTTTTCCTCGCCAA sitA 3006368 - 3007285 + | putative periplasmic binding protein sitB 3007282 - 3008103 + | putative ATP-binding protein sitC 3008100 - 3008960 + | putative permease sitD 3008951 - 3009799 + | putative permease avrA 3010806 - 3009898 - | secreted effector protein sprB 3011722 - 3010967 - | transcriptional regulator TERM 3941 3011142 - 3011158 + g 77 -3.7 -5.03145 | TAAATACTGACGGTT TTTGTTC CCA GACCAAA TTTTTTCGCCAGTTC hilC 3012994 - 3012107 - | invasion regulatory protein orgC 3013791 - 3013339 - | putative cytoplasmic protein TERM 3942 3013403 - 3013380 - G 71 -6 -4.36914 | opp_overlap 3013380 3013383, overlap 3013384 CCCCGCCCGATAAAA TAATCTCCTG CATC CAGGAGGTCA TTTGTGACTGTGCGT orgB 3014468 - 3013788 - | needle complex export protein orgA 3015024 - 3014425 - | needle complex assembly protein TERM 3943 3014788 - 3014818 + gr 100 -16.3 -4.1899 | gap 1, overlap 3014788 3014791 TTGCGGCAGTCGGCG C-CACTGACGCAGC CACA GCTGCGTCAGTGAG TTTTGAATACACTCC TERM 3944 3014788 - 3014817 + gr 100 -16.5 -3.11073 | overlap 3014788 3014791 TTGCGGCAGTCGGCG CCACTGACGCAGC CACA GCTGCGTCAGTGA GTTTTGAATACACTC TERM 3945 3014791 - 3014814 + gr 100 -16.8 -2.76404 | overlap 3014788 3014788 CGGCAGTCGGCGCCA CTGACGCAGC CACA GCTGCGTCAG TGAGTTTTGAATACA prgK 3015754 - 3014996 - | needle complex inner membrane lipoprotein TERM 3946 3015028 - 3015059 + gr 77 -4.5 -4.91109 | opp_overlap 3015057 TCGCCTTATCATCAG CCGTTATGCCT TTCTTATTGC GGGCATAATGG TTTTTGTAATACCAG prgJ 3016056 - 3015751 - | needle complex minor subunit prgI 3016317 - 3016075 - | needle complex major subunit prgH 3017520 - 3016342 - | needle complex inner membrane protein hilD 3017836 - 3018765 + | invasion protein regulatory protein TERM 3947 3019036 - 3019068 + F 100 -11.3 -4.81163 | overlap 3019038 GATGACACTATCTCC TTCCGGCTTTAACCC TGT GGATTAAGGCCGGCA TTTTATTCATATTTA TERM 3948 3019038 - 3019066 + F 83 -13.9 -2.66616 | overlap 3019036 TGACACTATCTCCTT CCGGCTTTAACCC TGT GGATTAAGGCCGG CATTTTATTCATATT hilA 3019856 - 3021517 + | invasion protein regulator iagB 3021535 - 3022017 + | invasion protein precursor TERM 3949 3022073 - 3022018 - T 74 -7.2 -4.32678 | opp_overlap 3022027 3022029, overlap 3022029 GCGGCAAACAAATAA TTATACAGAAATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATGTTTTTATCA GCTTGCCGTCGTCAT TERM 3950 3022027 - 3022064 + T 100 -10.1 -4.87786 | opp_overlap 3022018 3022029, overlap 3022029 AAATAATTATACAGA AATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATG TTTTTATCAGCTTGC TERM 3951 3022029 - 3022062 + T 95 -12.7 -4.05669 | opp_overlap 3022029 3022018, overlap 3022027 ATAATTATACAGAAA TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA TGTTTTTATCAGCTT TERM 3952 3022062 - 3022029 - T 100 -14.9 -4.18019 | opp_overlap 3022027 3022029, overlap 3022018 ATAATTATACAGAAA TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA TGTTTTTATCAGCTT sptP 3023702 - 3022071 - | protein tyrosine phosphatase/GTPase activating protein sicP 3024081 - 3023689 - | secretion chaparone iacP 3024660 - 3024412 - | acyl carrier protein sipA 3026736 - 3024679 - | secreted effector protein TERM 3953 3025871 - 3025881 + g 76 -3.2 -5.0133 | TTGATATTAATACCC GTAG GTT CTGC TTTTTTCCCACCATC sipD 3027786 - 3026755 - | translocation machinery component sipC 3029086 - 3027857 - | translocation machinery component TERM 3954 3028841 - 3028861 + g 70 -6.9 -4.07687 | CAAATCCTGATTCAT GTCGGTATT TTG AATACTGGC TTTTAAAAAGGACGT sipB 3030895 - 3029114 - | translocation machinery component TERM 3955 3029156 - 3029142 - G 74 -4.2 -4.77165 | opp_overlap 3029143, overlap 3029143 TGGCGCAGAATAAAA CGCGAA GCA TCCGCA TTTTGCTGTACCGCA TERM 3956 3029304 - 3029286 - G 70 -5.2 -4.46212 | opp_overlap 3029288 3029289, overlap 3029287 3029289 3029294 CGGGCGAGCATAAAA TCAGCAAG CGC CTCGCTGG CATTTTTAATAAATA TERM 3957 3029288 - 3029306 + g 74 -4.4 -4.7497 | opp_overlap 3029287 3029286 3029289 3029294, overlap 3029289 GGCGAGCATAAAATC AGCAAGCG CCT CGCTGGCA TTTTTAATAAATACG TERM 3958 3029677 - 3029691 + g 74 -4.2 -4.77165 | CACCAACAATGCTGC CGGC CATCTCT GCCG TTTTCTTATCGACGC TERM 3959 3029912 - 3029896 - G 73 -5.1 -4.59773 | overlap 3029908 CCCCACCGGTAAAAA CAGCG GCCACAA CGCTG ACAATGGTTAGCAGC TERM 3960 3030437 - 3030449 + g 81 -6.9 -4.77438 | GTCATAAACACTCTT GGCGG TAT CCGTC TTTTTGATACTGGCT TERM 3961 3030845 - 3030828 - G 74 -7.7 -4.09739 | gap 1, opp_overlap 3030834, overlap 3030817 3030829 CGAACGCCTTCAAAA GCCGCCTC AGC GAGGCG-C GGATTTTGGGTATAT sicA 3031395 - 3030898 - | secretion chaperone spaS 3032603 - 3031533 - | surface presentation of antigens protein SpaS spaR 3033381 - 3032590 - | needle complex export protein TERM 3962 3033200 - 3033190 - G 72 -2.4 -4.87665 | CGCCACCGATAAAAA CGGC GGC GCCT CGTTCAATGCATGCG TERM 3963 3033319 - 3033306 - G 95 -3.1 -5.84381 | gap 1, overlap 3033307 GCAGGAAGAAAAAAA TCGGCG CCA CGC-GA GCAAACCCTAGCGCC spaQ 3033645 - 3033385 - | needle complex export protein TERM 3964 3033596 - 3033544 - G 79 -11.4 -3.61715 | gap 1, overlap 3033545 TACCGTCTGGAATAA CCCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGGA TCAAAACAAGATAGA TERM 3965 3033595 - 3033545 - G 76 -12.7 -2.76815 | gap 1, overlap 3033544 ACCGTCTGGAATAAC CCTACCAGGA-GGCCGATAATCGT TGCG ACAATCGTCGGCCACCCTGACAGG ATCAAAACAAGATAG spaP 3034345 - 3033671 - | surface presentation of antigens protein SpaP spaO 3035246 - 3034335 - | surface presentation of antigens protein SpaO TERM 3966 3034711 - 3034697 - G 71 -5.7 -4.24342 | TCGCGTAGCAATAAA CTTCC GCACG GGAAG TACGAATCAGGAGTA invJ 3036256 - 3035246 - | needle length control protein TERM 3967 3035723 - 3035740 + g 74 -6.9 -4.30719 | opp_overlap 3035722 GCCCTCTTTACGAAC GCCTTCG CCCG CGATGGC TTTATTATCCCCAGG TERM 3968 3036074 - 3036084 + g 71 -4.6 -4.59089 | opp_overlap 3036071 TGCCGCCAGTAATAA CGGT AAA GCCG TTTCTTTATGCATTA invI 3036699 - 3036256 - | needle complex assembly protein invC 3037972 - 3036677 - | ATP synthase SpaL TERM 3969 3037262 - 3037237 - G 72 -2.4 -4.91712 | overlap 3037238 TGGAATCGATAAAAA GCACGACCCG TTTTCC CTGGTCGCGA AAATATTCCGCTACG TERM 3970 3037903 - 3037923 + g 86 -7.5 -4.73105 | CCACATCGCGCAATT CCGCCTCAA TAA TTGGGCCGG TTATTTTTTGTGGGT invB 3038376 - 3037969 - | secretion chaperone TERM 3971 3038129 - 3038113 - G 78 -12.3 -3.21099 | CTCCCCCAGTAGTAA TTGCCCG CCG CGGGCAA AATGGCATCCTTCCA invA 3040457 - 3038400 - | needle complex export protein TERM 3972 3039575 - 3039557 - G 89 -3 -5.47964 | ATAAAATAACAAAAA CCGGCAGT GGG AATCCCGG CAGAGTTCCCATTGA TERM 3973 3040056 - 3040032 - G 73 -5.5 -4.55689 | opp_overlap 3040033, overlap 3040033 ACCATCCAGAGAAAA TCGGGCCGCGA CTT CCGCGACACGT TCTGAACCTTTGGTA invE 3041600 - 3040482 - | invasion protein invG 3043285 - 3041597 - | outer membrane secretin precursor invF 3043932 - 3043282 - | invasion regulatory protein TERM 3974 3043842 - 3043830 - G 73 -5.5 -4.59853 | overlap 3043831 TTAACGGTCGAAAAA CCAGG TCT CCTGA TACTGGTGCGACAAC TERM 3975 3043981 - 3043993 + H 76 -9.1 -3.66438 | overlap 3043973 CCATGCTTCCGGGCT GCGGA TTT TCCGC TTCTCTCCTTCTTTA invH 3044389 - 3044832 + | needle complex outer membrane lipoprotein precursor TERM 3976 3044984 - 3045002 + F 87 -10.3 -4.19311 | opp_overlap 3044971 3044986, overlap 3044986 ATCTGCTTTTTGATA CAGCAGC ACCTC GCTGCTG CTTTTTTTATTTGTG TERM 3977 3044986 - 3045003 + F 100 -7 -6.02919 | opp_overlap 3044971 3044986, overlap 3044984 CTGCTTTTTGATACA GCAGCA CCTCGC TGCTGC TTTTTTTATTTGTGA STM2901 3045263 - 3045712 + | putative cytoplasmic protein STM2902 3045697 - 3046044 + | putative cytoplasmic protein STM2903 3046643 - 3046317 - | putative cytoplasmic protein STM2904 3047332 - 3047622 + | putative ABC-type transporter TERM 3978 3047687 - 3047659 - g 90 -10.4 -4.2349 | CCGCGATAGGGAAAA CCCACAATCGAA TGAAT TTTGATTGTGGG GATGCCGATCTGAAC STM2905 3047619 - 3048146 + | putative acetyltransferase TERM 3979 3049398 - 3049408 + G 89 -3.2 -5.44119 | overlap 3049396 GGTTCTTTCTGTTCA GGCA ATC TGTC TTTTTTTAAAATAAA pphB 3048771 - 3049427 + | serine/threonine-specific protein phosphatase 2 STM2908 3050120 - 3049599 - | putative cytoplasmic protein TERM 3980 3051489 - 3051474 - g 90 -4.6 -5.40072 | overlap 3051476 CGTTGCGTAAAAAAA TGGGCG ATTT CGCCGA GCTGCGCGACCTCCT mutS 3050279 - 3052846 + | DNA mismatch repair protein TERM 3981 3052887 - 3052848 - T 100 -21.6 -3.5394 | gap 1, opp_overlap 3052840 3052840 AAAGTCTGGTGTAAA CGTGTCAGACCCGATAGCG CCG CGCTATCGGGTCTG-CGCG CCGGAACAGGCTTTT STM2910 3053282 - 3052902 - | putative cytoplasmic protein TERM 3982 3053132 - 3053122 - G 95 -8.2 -5.00616 | TGCGCCTGGAAAAAA GCGC CCA GCGC CGGATAATCCAGACA STM2911 3054487 - 3053279 - | putative permease TERM 3983 3054415 - 3054405 - G 74 -6.8 -4.27617 | GACATCGCAGGAAAA GCCA CGC TGGC AATAAACAGATTAAT TERM 3984 3054583 - 3054559 - H 82 -13.1 -2.90075 | overlap 3054561 CGCGCTTCAACGATA TACTGTCAAAA TAA TTTTGACAGTA AAGGAGCTCGCCATG TERM 3985 3054581 - 3054561 - H 75 -11.3 -3.00298 | overlap 3054559 CGCTTCAACGATATA CTGTCAAAA TAA TTTTGACAG TAAAGGAGCTCGCCA STM2912 3054575 - 3055507 + | putative transcriptional regulator TERM 3986 3055504 - 3055541 + T 72 -10.6 -2.77416 | gap 1, overlap 3055500 3055533 GCACGCCCCATCATC GTAGCCAGTCCGGGAGC ATTGC GCTCCCGGAC-GGATAA TACTGTCTTAATCCT STM2913 3057045 - 3055549 - | putative permease STM2914 3057992 - 3057042 - | putative nucleoside-diphosphate-sugar epimerase ygbM 3058808 - 3058032 - | hypothetical protein ygbL 3059451 - 3058813 - | putative aldolase TERM 3987 3058990 - 3058975 - G 78 -6 -4.75372 | ATTAGCCAGTAAAAA GGCCTG ATGC CGGGCC GCCAGCGCAGCCAAA ygbK 3060710 - 3059448 - | putative tRNA synthase ygbJ 3061627 - 3060704 - | 3-hydroxyisobutyrate dehydrogenase TERM 3988 3061720 - 3061734 + H 75 -2.9 -5.24129 | opp_overlap 3061720 TTGTTTCACAAAAAA TAACA AAATG TGTTA TTTTTTGTGAAGGCA TERM 3989 3061734 - 3061720 - H 75 -2.9 -5.24129 | opp_overlap 3061720 TTGTTTCACAAAAAA TAACA AAATG TGTTA TTTTTTGTGAAGGCA ygbI 3061824 - 3062588 + | putative regulatory protein TERM 3990 3062593 - 3062606 + T 70 -9.5 -3.11459 | opp_overlap 3062589 3062588 3062586 3062593 CCAAACAATAGCGAA GCGGC GCAA GCCGC TTACGTCATCATCTT TERM 3991 3062606 - 3062593 - T 71 -9.5 -3.2661 | opp_overlap 3062593, overlap 3062589 3062588 3062586 CCAAACAATAGCGAA GCGGC GCAA GCCGC TTACGTCATCATCTT STM2920 3063011 - 3062607 - | putative transcriptional regulator STM2921 3063182 - 3063775 + | putative flavoprotein STM2922 3063775 - 3065202 + | putative 3-polyprenyl-4-hydroxybenzoate decarboxylase STM2923 3065213 - 3065449 + | putative cytoplasmic protein TERM 3992 3065487 - 3065444 - T 100 -14.8 -4.27117 | opp_overlap 3065456, overlap 3065456 CTGGCAGAAGACAAA CGGTAAAAAAAAGGCCAGTC GACA GACTGGCCTTTTTTTGACAA GGGTACTTACTCGCG TERM 3993 3065456 - 3065475 + T 100 -13.6 -5.40072 | opp_overlap 3065456 3065444 AAACGGTAAAAAAAA GGCCAGTC GACA GACTGGCC TTTTTTTGACAAGGG TERM 3994 3065475 - 3065456 - T 100 -13.6 -5.82388 | opp_overlap 3065456, overlap 3065444 AAACGGTAAAAAAAA GGCCAGTC GACA GACTGGCC TTTTTTTGACAAGGG rpoS 3066486 - 3065494 - | RNA polymerase sigma factor RpoS nlpD 3067682 - 3066549 - | lipoprotein NlpD TERM 3995 3067013 - 3067027 + g 73 -5 -4.6635 | overlap 3067004 CCGTCCCAGCAGGCT TGTTGT TTG GCAACA TTTTGTTAGCACTTT pcm 3068484 - 3067858 - | protein-L-isoaspartate O-methyltransferase TERM 3996 3067937 - 3067921 - G 77 -7.9 -4.33417 | overlap 3067922 GGTATCGATAATAAA TTCGCCG CCC CGGCGAC GCACGCGTTTCAAAA TERM 3997 3067936 - 3067922 - G 74 -11.4 -3.19568 | overlap 3067921 GTATCGATAATAAAT TCGCCG CCC CGGCGA CGCACGCGTTTCAAA surE 3069239 - 3068478 - | stationary phase survival protein SurE truD 3070269 - 3069220 - | tRNA pseudouridine synthase D TERM 3998 3069300 - 3069287 - G 77 -8.1 -4.07687 | ACGCTGGTGGCAAAA CTGCC TGCG GGCAG CCAGAAACGTAACTC TERM 3999 3069677 - 3069667 - G 74 -8.2 -4.01158 | overlap 3069668 AATTTGATTAAACAA CGCG CTA CGCG CCGCCGACAACCAAA TERM 4000 3069711 - 3069724 + g 71 -9.5 -3.51232 | overlap 3069708 TGCGTTTATTGCGAT CGCGC ACCG GCGCG TTACTTTGCGCCCAG ispF 3070745 - 3070266 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 3071455 - 3070745 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 4001 3071064 - 3071078 + g 70 -7 -4.21194 | opp_overlap 3071064, overlap 3071047 3071066 GGACTGGCGAGGATA CCGCCG ACC CGGCTG TTTTCGCTGATAGCC ftsB 3071785 - 3071474 - | cell division protein FtsB TERM 4002 3071864 - 3071893 + r 81 -12.3 -3.12351 | gap 1, opp_overlap 3071864 3071865, overlap 3071865 GGATTGCCGCGACAA CG-CCGGCAAATGT ACC ACATTTGCCGGATG TTACGTATACCCGAG TERM 4003 3071892 - 3071864 - R 74 -10.3 -3.29144 | opp_overlap 3071864 3071865, overlap 3071865 GGATTGCCGCGACAA CGCCGGCAAATGT ACC ACATTTGCCGGAT GTTACGTATACCCGA TERM 4004 3071865 - 3071891 + r 86 -13.8 -3.12327 | opp_overlap 3071865 3071864, overlap 3071864 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 4005 3071891 - 3071865 - R 83 -13.8 -2.57344 | opp_overlap 3071864 3071865, overlap 3071864 GATTGCCGCGACAAC GCCGGCAAATGT ACC ACATTTGCCGGA TGTTACGTATACCCG TERM 4006 3072015 - 3072000 - R 76 -8.2 -4.15698 | TAGCCATATAAATAA CGCGCC GAAC AGCGCG CCTACGGCCAGTAGA ygbE 3072332 - 3071976 - | hypothetical protein cysC 3072955 - 3072350 - | adenylylsulfate kinase TERM 4007 3072892 - 3072863 - G 79 -12.9 -2.90813 | gap 1, opp_overlap 3072865, overlap 3072860 3072865 GAGTCCGGTAAACCA CAGCACCAC-GCCA CGG TGGCCGTGGAGCTG TTCACGGGCGGCGAC cysN 3074381 - 3072942 - | sulfate adenylyltransferase subunit 1 TERM 4008 3073179 - 3073127 - G 70 -2.8 -4.82901 | gap 2, opp_overlap 3073135, overlap 3073130 3073131 GTCGGTCGATAAAAA TCAGCCCGCCCGTCACCGGATTTT GCTGATA AATATCCAGCG-CGAGC-GGCTCA TCGAATGTCATCTCC cysD 3075299 - 3074391 - | sulfate adenylyltransferase subunit 2 iap 3075550 - 3076596 + | alkaline phosphatase isozyme conversion aminopeptidase TERM 4009 3076615 - 3076638 + T 78 -6.6 -4.60255 | overlap 3076617 GCTGGTGAAACGTGT TTATCCCCGC TGGC GCGGGGAACA TTTTTCAGCCCTTGT TERM 4010 3077561 - 3077571 + T 74 -8.2 -3.86897 | opp_overlap 3077557 TCAATGCGAAATTTT CCGC GAC GCGG TTTATCCCCGCTGGC TERM 4011 3077630 - 3077660 + T 78 -11.9 -3.08173 | gap 1, opp_overlap 3077620, overlap 3077622 3077638 3077638 AATATCGCCCTGCAA CGGTTTATCCCCGC TGGC GCGGGGA-ACACCG TTGCGTCAGGTTGAT TERM 4012 3077805 - 3077815 + T 74 -8.2 -3.86897 | opp_overlap 3077805 3077804 3077801 AGTCTTAACGATAAT CCGC AAC GCGG TTTATCCCCGCTGGC ygbF 3078540 - 3078244 - | hypothetical protein STM2938 3079457 - 3078537 - | putative cytoplasmic protein TERM 4013 3078832 - 3078821 - G 77 -3.6 -5.00611 | CATAAACAAAAGAAA GCGG CTTA CCAC TATGGATAAAACCGA TERM 4014 3079322 - 3079345 + g 79 -7.4 -4.42386 | opp_overlap 3079309 3079322 AAGCGACCGAACCAA CGGGAATATG CGTG CGGATTCCCG TTTTATCGATCAGCA ygcH 3080104 - 3079454 - | putative cytoplasmic protein STM2940 3080832 - 3080086 - | putative cytoplasmic protein TERM 4015 3080624 - 3080606 - G 74 -11.6 -3.29511 | overlap 3080607 TGCACCGTGTGATAA TCCCGCGC CCA GCGCGGGT TGCCACTGGCGCACA TERM 4016 3080623 - 3080607 - G 83 -15.1 -2.57564 | overlap 3080606 GCACCGTGTGATAAT CCCGCGC CCA GCGCGGG TTGCCACTGGCGCAC yghJ 3081901 - 3080843 - | putative cytoplasmic protein STM2942 3082475 - 3081915 - | putative transposase STM2943 3084028 - 3082472 - | putative cytoplasmic protein TERM 4017 3082670 - 3082682 + g 70 -6.9 -4.12188 | ATTCAGCCTTTCGTC CGGCT TGT GGCCG TTTTCCAGATCGTGA ygcB 3086703 - 3084040 - | putative helicase TERM 4018 3085994 - 3086015 + g 80 -4.3 -5.02074 | opp_overlap 3086010 TTAGCGAGAGCTTGC TGCCAGTAG GTAT CAACAGGCA TTTTTTCCGCAGTAC sopD 3087148 - 3088101 + | secreted effector protein TERM 4019 3088147 - 3088131 - T 83 -9.4 -4.32804 | opp_overlap 3088131 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTTCATAGCAGCA TERM 4020 3088131 - 3088147 + T 89 -9.4 -4.72272 | opp_overlap 3088131 ATAACCAATTTAAAA TCCGGC TGCCT GCCGGA TTTTTCATAGCAGCA cysH 3088923 - 3088189 - | phosphoadenosine phosphosulfate reductase cysI 3090711 - 3088999 - | sulfite reductase subunit beta cysJ 3092510 - 3090711 - | sulfite reductase subunit alpha ptpS 3092934 - 3093296 + | putative 6-pyruvoyl tetrahydrobiopterin synthase STM2950 3094181 - 3093384 - | putative metal-dependent hydrolase TERM 4021 3094645 - 3094675 + r 79 -11.9 -3.13403 | gap 1, overlap 3094643 TGGGTTAATTGGACA CGGTTTATCCCCGC TGGC GCGGGGA-ACACCG TATTCGTCACACAGC TERM 4022 3096082 - 3096046 - R 74 -10.2 -3.18264 | gap 1 GTCGTTAGCCAGTAA TTCCGGTTTATCCCCGC TGGC GCGGGGA-ACACCTGAA AACGCATGGAATCCG TERM 4023 3096380 - 3096390 + r 89 -4 -5.67283 | opp_overlap 3096380 TTGATGCAAAAAAGT TCAT AGA ATGA TTTTTTCTTTAAATT ygcF 3097228 - 3096557 - | hypothetical protein TERM 4024 3096631 - 3096643 + g 80 -9.1 -4.09519 | opp_overlap 3096631 ACGTTTCAATACACA GACGC GTC GCGTC TTCTTTCTGGCTAAT TERM 4025 3097175 - 3097159 - G 78 -2.2 -5.24551 | GTAAACGAATAAAAA TAGCGG GGACG CCGGTA AAATAACCCTCGCCT TERM 4026 3097323 - 3097336 + r 80 -9.5 -3.97368 | opp_overlap 3097323 ACAGATACAAAAAAA CCCGC CGAA GCGGG TTTATACGTTAAGAG TERM 4027 3097336 - 3097323 - R 100 -9.5 -5.77988 | opp_overlap 3097323 ACAGATACAAAAAAA CCCGC CGAA GCGGG TTTATACGTTAAGAG eno 3098662 - 3097364 - | phosphopyruvate hydratase TERM 4028 3098730 - 3098707 - R 100 -13.9 -4.08164 | opp_overlap 3098705 3098704 AAAACTTCAGACAAA CGGTGCACC GCTGAG GGTGCACCG CCGTTCTAACTTTTT pyrG 3100382 - 3098745 - | CTP synthetase mazG 3101410 - 3100610 - | nucleoside triphosphate pyrophosphohydrolase TERM 4029 3101008 - 3101023 + g 87 -8.2 -4.57073 | overlap 3101011 3101017 GCGGAATATCGTCCA GCGCGG AATG CTGCGC TTTTTGCGCGCGCTC TERM 4030 3101766 - 3101785 + r 91 -8 -5.24531 | CGCCAGTTTAATATT CAAAAAAG ACCG CTTTTTTG TTTTTTCTGGAACAT STM2954.1n 3102468 - 3102178 - | hypothetical protein STM2955.S 3102715 - 3102440 - | putative transcriptional regulator relA 3105114 - 3102880 - | GDP/GTP pyrophosphokinase TERM 4031 3104020 - 3104037 + g 77 -8.3 -4.1523 | overlap 3104018 ATGACCGGAGCGCAC GCCGCCG GACG CGGCGCC TTCTTTATACTTCCA TERM 4032 3105159 - 3105133 - R 73 -10.9 -2.52464 | gap 1, opp_overlap 3105130 CCTCTCCTTAAGGGA CCAGGCCTACCG AAGT CGGTAAGCC-GG TAATCATTACATGCG rumA 3106461 - 3105166 - | 23S rRNA 5-methyluridine methyltransferase TERM 4033 3107060 - 3107071 + G 85 -2.2 -5.47159 | AGATTTTTATCTCCA GCGT GATG ATGC TTTTTTGTATTGGCA barA 3106519 - 3109275 + | hybrid sensory histidine kinase BarA STM2959 3110461 - 3109319 - | putative glycerate kinase 2 TERM 4034 3110509 - 3110534 + r 80 -13.3 -2.52464 | opp_overlap 3110509 3110512 CATACACCCAGAGAA GAACCGGTTCC TTAC GGAACCGGCTC TGACTTAACGCACCA TERM 4035 3110534 - 3110509 - R 100 -15.5 -3.54436 | opp_overlap 3110509, overlap 3110512 CATACACCCAGAGAA GAACCGGTTCC TTAC GGAACCGGCTC TGACTTAACGCACCA TERM 4036 3110531 - 3110512 - R 100 -13.6 -3.90092 | opp_overlap 3110509, overlap 3110509 ACACCCAGAGAAGAA CCGGTTCC TTAC GGAACCGG CTCTGACTTAACGCA gudD 3111879 - 3110539 - | d-glucarate dehydratase ygcY 3113240 - 3111900 - | putative D-glucarate dehydratase TERM 4037 3111984 - 3111996 + g 77 -4.7 -4.84359 | TGCATCATTACGCGC GCCGC CTG GCAGC TTTTTATACGCGTCA TERM 4038 3112070 - 3112083 + g 95 -8.1 -4.98531 | CTGGCGCATCCGGAA CGGCA ATTT TGCCG TTTTTAATTTCCAGC TERM 4039 3112554 - 3112568 + g 95 -5.6 -5.40072 | ATCCACGGTAATACG CGCGTC CGG GAAGCG TTTTTTTAGCGCGCG gudT 3114595 - 3113237 - | putative D-glucarate permease TERM 4040 3114300 - 3114288 - G 85 -9.1 -4.46757 | AAGATATCGACAAAA CCCTG CAA CAGGG TGAAGACTGACCAAA TERM 4041 3114761 - 3114749 - R 74 -3.3 -5.01535 | GGAGAAGTATAAAAA GCGCG CCA CACAC ACTCACCGTGCAACA TERM 4042 3114877 - 3114862 - R 72 -10.4 -2.78901 | overlap 3114861 AAATGAAATCAGAAG GCGTCG GCGT CGACGC AGGAGGAGTAAAAAG TERM 4043 3115068 - 3115049 - R 72 -10.7 -2.82666 | opp_overlap 3115049 3115048, overlap 3115046 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA TERM 4044 3115049 - 3115068 + r 72 -10.7 -2.78679 | opp_overlap 3115046 3115049, overlap 3115048 GCAAACGAAAAGGTA CCCTCCC GTAGGG GGGAGGG ATTTACCTCAGGAAA STM2963 3115525 - 3115076 - | flavodoxin yqcB 3116326 - 3115544 - | tRNA pseudouridine synthase C yqcC 3116655 - 3116326 - | putative cytoplasmic protein TERM 4045 3116580 - 3116557 - G 89 -13.2 -3.53012 | gap 1 TTGGGTGCTGGTAAA CAGG-TGCGCC TGC GGCGCATCCTG CCGCCAGTGGCGATG TERM 4046 3116703 - 3116732 + r 79 -10.7 -3.51411 | opp_overlap 3116705, overlap 3116699 3116704 AAGAATAACAAAAAA AAGGGAGCACTGT ATAA ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 4047 3116704 - 3116731 + r 83 -14.2 -2.70525 | opp_overlap 3116705, overlap 3116703 3116699 AGAATAACAAAAAAA AGGGAGCACTGT ATAA ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 4048 3116730 - 3116705 - R 100 -17.7 -6.22691 | opp_overlap 3116704 3116703 3116699 GAATAACAAAAAAAA GGGAGCACTGT ATAA ACAGTGCTCCC GGTTCGTTTCGCAGC syd 3117812 - 3117267 - | SecY interacting protein Syd queF 3117881 - 3118729 + | 7-cyano-7-deazaguanine reductase TERM 4049 3119573 - 3119562 - g 72 -3.6 -4.70659 | CCGGATATCGAAAAA CGCC TGGA AGCG TTCGTCCGTATCGCA ygdH 3118842 - 3120206 + | putative nucleotide binding TERM 4050 3120212 - 3120240 + F 77 -10.2 -3.3858 | overlap 3120213 3120235 CTGCGCTTAACGCTT ATGCCCGGTTGC CGCCA GCAGCCGGGCGC TTCTCCCATTCCTTT TERM 4051 3120213 - 3120239 + F 83 -13.7 -2.62425 | overlap 3120212 3120235 TGCGCTTAACGCTTA TGCCCGGTTGC CGCCA GCAGCCGGGCG CTTCTCCCATTCCTT sdaC 3120771 - 3122060 + | putative serine transport protein TERM 4052 3122069 - 3122087 + F 90 -13.1 -3.61902 | CAGCTAAGTCCTTTA GCGCCGC TTACC GCGGCGC TTCTCTATGATACAA TERM 4053 3122226 - 3122191 - g 83 -10.4 -3.95584 | opp_overlap 3122190 GTCGGACCAATGAAA GCAGGCAAGCAGTTCA CGGA CGATCTGATTGCCCGC CATATTCTTACAGAT TERM 4054 3122745 - 3122725 - g 86 -11.9 -3.83026 | opp_overlap 3122728, overlap 3122728 3122729 GCTCTGCACAGTAAA GAAGCGCTG GAG CAGCACTTC GCCAGGGTCTGGGAG TERM 4055 3122742 - 3122728 - g 71 -7.8 -4.04806 | opp_overlap 3122728, overlap 3122725 3122729 CTGCACAGTAAAGAA GCGCTG GAG CAGCAC TTCGCCAGGGTCTGG TERM 4056 3122898 - 3122874 - g 95 -14.3 -3.4252 | GGTCAGTCAGGATAA GACCACCACCG ATC CGATGGCGGTC GTCGACTGGATCAAT sdaB 3122119 - 3123486 + | L-serine dehydratase/L-threonine deaminase 2 TERM 4057 3123513 - 3123541 + F 82 -7.5 -4.69053 | gap 2, opp_overlap 3123522, overlap 3123530 3123534 TTTTAGGATCTGTAA GCCGGATAAGGCG CTCGC CGCC--ATCCGGC TTTTGTTGCCTGATG xni 3123597 - 3124412 + | exonuclease IX TERM 4058 3124395 - 3124412 + T 74 -5.5 -4.63932 | opp_overlap 3124389 GGAAACTTACAGCAG CTACGGC TGGC GCGGTAG TTTTGTTGCCGGATG fucO 3125652 - 3124504 - | L-1,2-propanediol oxidoreductase fucA 3126316 - 3125669 - | L-fuculose phosphate aldolase TERM 4059 3125852 - 3125872 + g 76 -9.7 -3.8046 | overlap 3125859 3125860 ACAAGCGATAAGCCC GTGATGCTG TAA CAGCGTCGC TTTACGATTTTTAAG TERM 4060 3127061 - 3127077 + H 72 -2.9 -4.94962 | CTAACTTTCAGGCCG GGCTTAT TCA GTCAGCC TTTTATTTCGGTTAT TERM 4061 3127107 - 3127117 + H 74 -6.8 -4.25104 | overlap 3127112 TTTCGTCATTCCAAT TCCC GCT GGGA TTTTGATGAAAAAAC TERM 4062 3128241 - 3128230 - g 85 -2.2 -5.52384 | overlap 3128231 3128233 CTGTCATGAAAAAAA TCAG CTTA CCGA AAATCGGTATCCGCC TERM 4063 3128715 - 3128694 - g 74 -2.2 -5.07486 | gap 1 GACGTCGAAGAAAAA CTG-CTGCG TTTTG CGCGGGCAG GGTTAGCGGTAGCCA TERM 4064 3128946 - 3128930 - g 70 -3 -4.82901 | gap 1, overlap 3128932 GTGGGCGGATAAAAA CTTCCGC TACG GCG-AAG ATCAGAACGCCTCGC TERM 4065 3129631 - 3129621 - g 71 -8.2 -3.84648 | GTGAATATCATCAAA GGCC TGG GGCC AGTACTGCAAATCGC fucI 3128220 - 3129995 + | L-fucose isomerase fucK 3130096 - 3131514 + | L-fuculokinase TERM 4066 3131814 - 3131842 + G 71 -5.9 -4.36914 | TAGAAGCGCCGTGCC CGGATATCGTTCG TAT CGACCGCTATGCG TTTTATGAGCGGGCG fucU 3131516 - 3131938 + | putative L-fucose-binding protein TERM 4067 3131934 - 3131924 - f 76 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CGCC GTAATCTCTTGCCGG TERM 4068 3131952 - 3131970 + F 83 -13.1 -3.17212 | AATCTCTTGCCGGTG CGCCCGC ATGAC GCGGGCG TTCATCGAATGATGG fucR 3131996 - 3132706 + | DNA-binding transcriptional activator FucR TERM 4069 3132715 - 3132761 + T 100 -10.9 -4.88736 | gap 2, opp_overlap 3132716, overlap 3132716 ATCGTAGACCGGATA AGCGT-GC-GTCATCCGGCGC TGATGAC GCGCCGGACGACGGCAACGCG TTTTTATCGCTCGTC TERM 4070 3132760 - 3132716 - T 100 -16.6 -3.34962 | gap 2, opp_overlap 3132716 3132715 TCGTAGACCGGATAA GCG-TGC-GTCATCCGGCGC TGATGAC GCGCCGGACGACGGCAACGC GTTTTTATCGCTCGT TERM 4071 3132716 - 3132760 + T 95 -14.4 -3.52519 | gap 2, opp_overlap 3132716, overlap 3132715 TCGTAGACCGGATAA GCGT-GC-GTCATCCGGCGC TGATGAC GCGCCGGACGACGGCAACGC GTTTTTATCGCTCGT ygdE 3133865 - 3132765 - | putative RNA 2'-O-ribose methyltransferase ygdD 3134253 - 3133858 - | hypothetical protein TERM 4072 3134225 - 3134213 - G 100 -9.1 -4.94058 | overlap 3134215 GCAACGTAAATAAAA CCGCT GAT AGCGG CGACAATCAGCATAA gcvA 3135189 - 3134272 - | DNA-binding transcriptional activator GcvA TERM 4073 3134629 - 3134645 + g 83 -7.9 -4.67168 | overlap 3134644 CAATAGCGTGTGTTT CGCCAGA TCT TCCGGCG TTTTTAACGGTTTTT TERM 4074 3135163 - 3135153 - G 74 -4.6 -4.77036 | opp_overlap 3135153 CGGCAGCATCAAAAA CGCG TAA CGCA TTTAAAGGAGGTAAT TERM 4075 3135221 - 3135249 + r 100 -7.5 -5.58454 | opp_overlap 3135221 3135225 GTCGAATGAATTTAA CAAATAGGTAACA ACA TGTAACCTATTAG TTTTTTTAATCTGAG TERM 4076 3135245 - 3135225 - R 74 -6.9 -4.26953 | opp_overlap 3135221, overlap 3135221 AATGAATTTAACAAA TAGGTAACA ACA TGTAACCTA TTAGTTTTTTTAATC TERM 4077 3135495 - 3135514 + r 100 -10.7 -6.02914 | opp_overlap 3135495 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC TERM 4078 3135514 - 3135495 - R 70 -10.7 -2.57423 | opp_overlap 3135495 ATAGTGATTAATGTA GCACCGC CATATT GCGGTGC TTTTTTTTGTATAAC ygdI 3135763 - 3135536 - | putative lipoprotein TERM 4079 3136217 - 3136203 - g 78 -2.1 -5.14563 | CGCCCGATGAAAAAA GTATC GTCTG GACAC GCGGCACCACCGAAG TERM 4080 3136886 - 3136906 + G 74 -8.1 -4.00348 | opp_overlap 3136885, overlap 3136893 ACGCTGGCGGAAGAC GCACTGGCG AAA CGCCCGGGC TTTCGTTCGTTCCGC csdA 3135956 - 3137161 + | cysteine sulfinate desulfinase ygdK 3137161 - 3137604 + | putative FeS center assembly protein TERM 4081 3138119 - 3138139 + G 76 -3.3 -4.99645 | GATCGCCGGACTTTT GATGATTGT CTC ATGGTCATC TTTTATTTATGCGCT STM2986.Sc 3137877 - 3138791 + | putative integral membrane protein ygdL 3139649 - 3138843 - | putative enzyme TERM 4082 3139346 - 3139359 + g 71 -9.5 -3.51708 | overlap 3139343 CATCGATAACCGTTA CCCGG CACT CCGGG TTAATTTGCCGAATC TERM 4083 3139556 - 3139580 + g 78 -7 -4.59773 | opp_overlap 3139555 CTACGACGCAGATAT GCGCCTCAGC AAACC GCTGCAGCGC TTTTTCACCGTACAG TERM 4084 3139688 - 3139670 - R 100 -10.3 -5.88565 | CTCAGAATAAAAAAA GGTGAGG TTATT CCTCACC CCTGCTCACTATTTT TERM 4085 3139781 - 3139793 + r 78 -6.2 -4.56597 | opp_overlap 3139762, overlap 3139780 3139781 CTAAACACGTTACCG GCGC CCGGC GCGC TTTTTAACACCCAGA mltA 3140856 - 3139759 - | murein transglycosylase A TERM 4086 3140397 - 3140418 + g 77 -8 -4.08945 | gap 1 CTGCGTAGATCTGAG CGCGGGACG GTAAG CGTCC-GCG TTTTGGCGGCATACT TERM 4087 3140767 - 3140784 + g 84 -9.1 -4.25104 | CCCGTCCTTATATTG CTGACCG CGAT CGGTCGG TTTTGATGAACAGGC TERM 4088 3141257 - 3141270 + r 100 -8.1 -5.77988 | opp_overlap 3141257 AACCAACTTAATGAA CACCC TTAC GGGTG TTTTTTTGTATCTGT amiC 3142609 - 3141356 - | N-acetylmuramoyl-L-alanine amidase TERM 4089 3142065 - 3142048 - G 74 -8.3 -4.06611 | opp_overlap 3142047 3142048 3142052, overlap 3142049 CAAGCATAATAACAA TGGGGCG GTCG CGCCCCG CTTTACCGGGCTGCG TERM 4090 3142064 - 3142049 - G 76 -11.8 -3.02882 | opp_overlap 3142048 3142047 3142052, overlap 3142048 AAGCATAATAACAAT GGGGCG GTCG CGCCCC GCTTTACCGGGCTGC TERM 4091 3142759 - 3142747 - H 78 -5.5 -4.73613 | GCATTACTAAGAAAA GCGAT CGG ACCGC ATAAAATTTACGCTT argA 3142842 - 3144173 + | N-acetylglutamate synthase TERM 4092 3144254 - 3144242 - T 70 -9.1 -3.30124 | TTGGAGGCCGGATAA GACGC TAC GCGTC GCCATCCGGCGAGAA RecD 3146111 - 3144276 - | exonuclease V subunit alpha TERM 4093 3145255 - 3145235 - G 76 -3.2 -5.07486 | gap 1, overlap 3145238 3145239 GATCGCCAAGAAAAA TGAC-CCGC CCGT GCGGCGGCA GAGAGTCAATCAAAC RecB 3149653 - 3146108 - | exonuclease V subunit beta TERM 4094 3146353 - 3146336 - G 72 -11.3 -3.01497 | GTACTGCAAATCATA GCGATGC GCCT GCATCGC CGCAGCCATCGCCGT TERM 4095 3148612 - 3148624 + g 100 -10.5 -4.72272 | opp_overlap 3148604, overlap 3148606 CGTCAAACCCCAGCT CGCCG CGC CGGCG TTTTTCCTGAGCCAC TERM 4096 3148735 - 3148756 + g 83 -12.3 -3.74693 | gap 1 CGACAAACAATGGGT GCTGG-GGCG TCA CGCCGCCAGC TTTGGTGCGCTCAGC TERM 4097 3148800 - 3148779 - G 82 -5.1 -5.08824 | opp_overlap 3148794, overlap 3148791 CGCTCAGCTAAAAAA CGCTGTGAA AATT TTCCCAACG CCTCGGGTAATTGAT TERM 4098 3149133 - 3149105 - G 70 -8.8 -3.63627 | gap 1 CTTCCACACGTCAAA CACCACCTGCGCG ATGT CGCGC-GGCAGCG GATAGCAATGACGCC TERM 4099 3149620 - 3149598 - G 71 -8.4 -3.90588 | GATGCTTCAATCAAA CGCTCGCC TGTCAGG GGCAAGCG CAGAGGATCAAGAGT ptr 3152534 - 3149646 - | protease III TERM 4100 3150352 - 3150368 + g 71 -4.3 -4.62302 | opp_overlap 3150345, overlap 3150354 3150367 CGACACCACGCCGAT CCGTTCG CCG CGAGCTG TTTTTGAACATCTTG TERM 4101 3151193 - 3151203 + g 81 -6.8 -4.72272 | TCTGCGGCGTCATCA TCGC CAG GCGA TTTTTGATAGCGGCA TERM 4102 3152219 - 3152234 + g 100 -7.6 -5.40474 | overlap 3152210 GGTATTCGGCAAGGC TATCCG CCTG CGGATA TTTTTTTGACCCCAT TERM 4103 3152619 - 3152635 + r 88 -3.7 -5.64274 | AACGGGATATTATTG TGCTG AACCAGG CAGCA TTTTTTTATCAGTAA recC 3156083 - 3152712 - | exonuclease V subunit gamma TERM 4104 3153104 - 3153092 - G 76 -9.1 -3.94812 | overlap 3153090 CTTTACGCAAAAACA GGCGA CTT TCGCC ACTACCGCCGCTGGC TERM 4105 3153972 - 3153983 + g 72 -3.6 -4.68593 | overlap 3153939 GCGACGGCTACGATC CCCG CGCA TGGG TTTTTGGCTCATCAG TERM 4106 3154805 - 3154781 - G 72 -12.1 -2.60823 | overlap 3154785 AAATGGCATAAGGCA GATAGCGCTCC GTT GGCGCGCTACC AAATACCGCCTGGAT TERM 4107 3155111 - 3155127 + g 70 -6.5 -4.19506 | opp_overlap 3155111 3155110 3155113, overlap 3155114 TAATATCAACAAACG CATCCAG TTC CTGGCTG TTTTCCAGTTCAGAT TERM 4108 3155912 - 3155902 - G 74 -6.8 -4.27316 | GCCGGTAACGGAAAA GCGA TAT TCGC CGCAATACCAAACTT ppdC 3156419 - 3156099 - | hypothetical protein ygdB 3156811 - 3156404 - | hypothetical protein TERM 4109 3156689 - 3156664 - G 80 -11.8 -3.32844 | opp_overlap 3156650 GCGCCGACTGCACAA GCGCCTGGCG TTGTAT CGCCAGGCTC TGCGTCGTCACGCGG ppdB 3157371 - 3156808 - | hypothetical protein ppdA 3157832 - 3157362 - | hypothetical protein TERM 4110 3157538 - 3157506 - G 83 -14.9 -2.77569 | overlap 3157498 3157497 3157531 AAAGAAGGCTAACGA CGGCGTGATATCGGC AAG GACGACATCACGCCA GTCGGGCGTAAACAC TERM 4111 3157995 - 3157976 - R 93 -7.1 -5.81032 | opp_overlap 3157976 GAAGGGTAAAAAAAA CCGACGC GCGATG ACGTCGG TTATGGCAGGATCGT thyA 3158811 - 3158017 - | thymidylate synthase TERM 4112 3158389 - 3158368 - G 76 -5.1 -4.75063 | gap 1, opp_overlap 3158377 3158378 ATAAAACTGGAAAAA GGCG-TGACA CGG CGCCAGCGCC ATCTTATCCAGCTCG lgt 3159693 - 3158818 - | prolipoprotein diacylglyceryl transferase TERM 4113 3159319 - 3159308 - G 71 -4.4 -4.64334 | AACGGCGCAATAAAA TCAG ACAC CTGA AAGAACGAGCGCTTC TERM 4114 3159767 - 3159743 - R 70 -9.2 -3.37354 | overlap 3159732 GATAGCGATTGATAA GCGCGCCTGC GCGTT GCAGACGCTC CAAAGGTGCGAATAA ptsP 3162155 - 3159909 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein TERM 4115 3161467 - 3161435 - G 71 -6.1 -4.26589 | opp_overlap 3161462 3161464 AGTACAGATCGAAAA TGGCCGCCGTCTC TTTTTGC GCGCCGGCGGCAA AGCGTTTGCTGTATC ygdP 3162698 - 3162168 - | dinucleoside polyphosphate hydrolase STM3004.1n 3163195 - 3163049 - | hypothetical protein mutH 3163381 - 3164076 + | DNA mismatch repair protein TERM 4116 3164618 - 3164606 - g 71 -7.7 -3.97139 | opp_overlap 3164605 GAAGGCGAAGAAGAA GGGTT AAA AACCC GGGTTTCTTCTTTCC ygdQ 3164258 - 3164971 + | putative transport protein ygdR 3165141 - 3165359 + | putative peptide transport protein TERM 4117 3165640 - 3165630 - g 71 -4.6 -4.63486 | overlap 3165632 ATTTGGTGAACAAAA CAGC GAA GCCG ACGCTCACGCACAGC tas 3165550 - 3166590 + | putative aldo-keto reductase ygeD 3167879 - 3166677 - | hypothetical protein TERM 4118 3167190 - 3167173 - G 79 -7.7 -4.49311 | gap 1, overlap 3167177 AGCACCAGCAGAAAA CGCA-GCG TCA CGCCTGCG CCCCAGAATAGCCCG aas 3170031 - 3167872 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 4119 3169004 - 3169020 + g 77 -7.9 -4.28254 | ATCCACAGCTTGTCG GCGGGTG TGA CGTCCGC TTTTAAATCTTCCAG TERM 4120 3170147 - 3170130 - H 100 -12.7 -5.75945 | opp_overlap 3170130 AGGTTCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4121 3170130 - 3170147 + H 81 -12.7 -3.14132 | opp_overlap 3170130 AGGTTCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4122 3170351 - 3170332 - H 100 -10 -6.4753 | opp_overlap 3170332 CGAAACAAAAAAAAA CCTGCGCA TCTC TACGCAGG TTGGTGTAATTCGTG TERM 4123 3170727 - 3170705 - g 74 -7.6 -4.10429 | overlap 3170692 AACGATTCGCCAAAA GCCAGCGAAG CGT CCCGGCTGGC GGTAACCAGCGCAAT galR 3170624 - 3171652 + | DNA-binding transcriptional regulator GalR TERM 4124 3171786 - 3171757 - g 74 -4.3 -4.68908 | gap 1 GGCAGGTAAAAGAAA GCACGCGCCAGAAA GTG TTTACGGCG-ATGC AGGCTCTGGGCTATC TERM 4125 3172643 - 3172664 + G 84 -5.7 -5.03314 | CACGCTGATTCTGCG CGAGTCCGT CGCC GCGGGCCCG TTTTTTCAACGTCCG STM3012 3171663 - 3172685 + | putative transcriptional regulator lysA 3173957 - 3172695 - | diaminopimelate decarboxylase lysR 3174075 - 3175010 + | DNA-binding transcriptional regulator LysR ygeA 3175689 - 3174982 - | putative racemase araE 3177220 - 3175802 - | L-arabinose/proton symport protein TERM 4126 3176381 - 3176371 - G 78 -6.8 -4.62069 | overlap 3176354 CGGCCATTTTAAAAA TGCG CGG CGCA TAGTACATAATGATG TERM 4127 3177512 - 3177495 - R 93 -7 -5.69473 | opp_overlap 3177495 3177494 GAGATCATAAAAAAA CCCTGT ACGAGG ACAGGG CTTTATCAGTTTTTT kduD 3178335 - 3177574 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 4128 3178185 - 3178163 - G 76 -2.7 -5.03314 | overlap 3178166 GTCAGGCTTAAAAAA CGACGTC-CCA GAG CGGTGACG-CG CGCAATAGTTTCCGT kduI 3179228 - 3178392 - | 5-keto-4-deoxyuronate isomerase TERM 4129 3179284 - 3179268 - R 81 -8.1 -4.42788 | opp_overlap 3179268 CGCAATGGCACAAAA TCAAAAC ACT GTTTTGA TTTATTTAACGGCAT TERM 4130 3179268 - 3179284 + r 81 -8.1 -4.41616 | opp_overlap 3179268 CGCAATGGCACAAAA TCAAAAC ACT GTTTTGA TTTATTTAACGGCAT TERM 4131 3179593 - 3179610 + r 88 -8.4 -4.83169 | TCTGTCACTGGCTTT GCCCTC GTGATA GAGGGC TTTTTATGACGGAAT yqeF 3180836 - 3179658 - | acetyl-CoA acetyltransferase TERM 4132 3180019 - 3180006 - G 71 -9.5 -3.54424 | overlap 3180007 GCCGACGCTGGCAAA CGCGC GGAT GCGCG CCAGCACCGGCAGCC TERM 4133 3180171 - 3180135 - G 71 -8.6 -3.89412 | gap 1, opp_overlap 3180164 ACCTAAACTATCAAA CGCCGGATGCAGCAGGG CTAA CCCCTCCGCA-CTGGCG TCGGCCCGCGGTTGT TERM 4134 3180924 - 3180911 - R 76 -2.4 -5.41143 | GATTGTTTAAAAAAA GTGA GTTTTA TCAC AAAGGAAATGACGCT STM3020 3181822 - 3180959 - | putative transcriptional regulator TERM 4135 3180995 - 3181011 + g 91 -7.9 -4.89477 | overlap 3180994 GCGAAGCCAGTTCCC CGCCGTT CCG GGCGGCG TTTTCTTGTTCCACA TERM 4136 3181067 - 3181081 + g 73 -5.6 -4.56597 | overlap 3181069 CCAGCCAGGAACATC CAGCTG CGC CAGCGG TTTTTCCGCCGCAAA STM3021 3181899 - 3182381 + | putative inner membrane protein STM3022 3182523 - 3183752 + | putative transport protein TERM 4137 3183787 - 3183760 - T 90 -9.9 -4.54727 | opp_overlap 3183762, overlap 3183762 TCGGCTAAAGTAAAA GATAGCCGGGA TATAAC TCCCGGCTATT TTATATAAGAATCCA TERM 4138 3183762 - 3183785 + T 100 -12.5 -4.53303 | opp_overlap 3183760 3183762 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC TERM 4139 3183785 - 3183762 - T 95 -12.5 -3.88396 | opp_overlap 3183762, overlap 3183760 GGCTAAAGTAAAAGA TAGCCGGGA TATAAC TCCCGGCTA TTTTATATAAGAATC yohL 3184055 - 3183783 - | putative cytoplasmic protein TERM 4140 3184830 - 3184854 + G 74 -8.5 -3.93038 | GCTTAAAGCGTTTAC GCTGGGCGCCA CGA TGGTGCTGAGC TTTAGTCTTGGCCTG yohM 3184177 - 3185043 + | nickel/cobalt efflux protein RcnA STM3025 3186011 - 3185253 - | putative cytoplasmic protein TERM 4141 3185751 - 3185739 - G 71 -4.8 -4.56597 | CCGGTCGCTGAAAAA CAGC TCATC GCTG ATAATCATAACCGGG STM3025.1N 3186510 - 3185998 - | hypothetical protein STM3026 3187730 - 3186654 - | putative outer membrane protein TERM 4142 3186714 - 3186727 + g 74 -9.5 -3.73088 | TGTCTTTACACTTCC CCCCG GGGT CGGGG TTATTACTGCAGTAT stdC 3188470 - 3187727 - | putative fimbrial chaparone stdB 3191000 - 3188511 - | putative outer membrane usher protein TERM 4143 3191090 - 3191065 - R 72 -4.7 -4.61868 | opp_overlap 3191065 CAGTCAGATATAAAA GCCGTCC GATCCCCTCCGT GGACGGC TTCTCCCTGTCGTTA stdA 3191680 - 3191120 - | putative fimbrial-like protein TERM 4144 3191932 - 3191916 - R 86 -5.1 -5.4593 | opp_overlap 3191920 3191924 3191930, overlap 3191918 3191920 TTAAAACAATAAAAA TAGATCG ATA CGATCGA TGATTATGATCGTAA TERM 4145 3191930 - 3191918 - R 76 -7.7 -4.32946 | opp_overlap 3191920 3191924, overlap 3191916 3191920 AAAACAATAAAAATA GATCG ATA CGATC GATGATTATGATCGT STM3030 3193055 - 3192423 - | hypothetical protein TERM 4146 3192638 - 3192653 + g 90 -4.6 -5.42131 | CGCCTGCTAGTTTCA GGGCCT CTAT AGTCCC TTTTTTATCTCCTTC STM3031 3193638 - 3193102 - | Ail/OmpX-like protein TERM 4147 3193978 - 3193964 - R 72 -6.4 -4.29106 | overlap 3193960 GGGGAGAGCAACAAA TCTGCC GGG AGCAGA CTTGAACGTCGCATG TERM 4148 3194243 - 3194211 - R 100 -11.3 -4.9448 | opp_overlap 3194218, overlap 3194215 3194217 3194218 ATCCAGGAAACAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA GATGCGCCTATAAGG TERM 4149 3194239 - 3194215 - R 100 -9.9 -4.98352 | opp_overlap 3194218, overlap 3194211 3194217 3194218 AGGAAACAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAGATGCGCCTAT TERM 4150 3194237 - 3194217 - R 95 -12.5 -4.08474 | opp_overlap 3194218, overlap 3194215 3194211 3194218 GAAACAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAGATGCGCCT TERM 4151 3194218 - 3194236 + r 100 -16 -4.62069 | opp_overlap 3194217 3194215 3194211 3194218 AAACAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC TERM 4152 3194236 - 3194218 - R 93 -16 -3.02644 | opp_overlap 3194218, overlap 3194217 3194215 3194211 AAACAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC tnpA_4 3194776 - 3194318 - | transposase TERM 4153 3194889 - 3194907 + r 100 -16 -4.18018 | opp_overlap 3194879 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAA TERM 4154 3194946 - 3194926 - R 100 -11.9 -5.4251 | opp_overlap 3194929 TCCATAGACAAAAAA GAAGGGAGC GGT ACTCCCTTC GTAAACATGTCAGAA STM3033 3195554 - 3195156 - | plasmid maintenance protein TERM 4155 3195451 - 3195425 - G 83 -12.4 -3.62096 | TTTCAGCACCGTAAA TCAGCTCCATTA AGG TGATGGAGCTGA TACACATTCGGGATG STM3034 3195781 - 3195554 - | putative cytoplasmic protein TERM 4156 3195796 - 3195818 + H 70 -9.3 -3.35679 | TAACTGCCTCCTTTC TGGATATAC AACGC GTATATCCA TTATGAGTAGAGGCG TERM 4157 3197125 - 3197098 - g 77 -4.1 -5.12617 | GAACCACCTAAAAAA CGGGGATTATA TCGGTG TCTACTCCCCG CTTGACGGGCTGGAC STM3036 3196484 - 3197290 + | putative inner membrane protein STM3038 3198333 - 3197575 - | putative metalloendopeptidase TERM 4158 3198015 - 3198032 + g 72 -4.1 -4.76123 | opp_overlap 3198001, overlap 3197999 3198014 ATGACGGTCTGACCG CAGCAGT TTTT GTTGCTG TTTTATTGCTGGTTT TERM 4159 3198553 - 3198576 + H 84 -8.1 -4.67038 | opp_overlap 3198553 GATCGTCTGAGTATA TGGCCTGGC CATGCT GCCGGGTCA TTTTAATTTTCAGGA TERM 4160 3198777 - 3198766 - g 71 -5.8 -4.24342 | TCGCTGAGCAAGAAA GCCT GGCC AGGC GTGTGGACGAATTCG idi 3198598 - 3199143 + | isopentenyl-diphosphate delta-isomerase TERM 4161 3199172 - 3199218 + T 74 -8.2 -3.90744 | gap 3, opp_overlap 3199175 3199177 3199179, overlap 3199178 3199179 GCGCTACGCCTGAAC GAAG-AGA-TGCCGGATGGCGGC TGAT GCC-CCATCCGGCAATTTACATC TTATTTCACCGGACG TERM 4162 3199211 - 3199177 - T 74 -10.7 -3.24032 | gap 1, opp_overlap 3199172 3199178 3199179, overlap 3199175 3199179 ACGCCTGAACGAAGA GATGCCGGATGGCGGC TGAT GCC-CCATCCGGCAAT TTACATCTTATTTCA TERM 4163 3199178 - 3199210 + T 100 -14.2 -3.82865 | gap 1, opp_overlap 3199177 3199175 3199179, overlap 3199172 3199179 CGCCTGAACGAAGAG ATGCCGGATGGCGGC TGAT GCC-CCATCCGGCAA TTTACATCTTATTTC TERM 4164 3199179 - 3199209 + T 100 -17.7 -2.88634 | gap 1, opp_overlap 3199179 3199177 3199175, overlap 3199178 3199172 GCCTGAACGAAGAGA TGCCGGATGGCGGC TGAT GCC-CCATCCGGCA ATTTACATCTTATTT TERM 4165 3199209 - 3199179 - T 100 -17.7 -3.18366 | gap 1, opp_overlap 3199178 3199172 3199179, overlap 3199177 3199175 GCCTGAACGAAGAGA TGCCGGATGGCGGC TGAT GCC-CCATCCGGCA ATTTACATCTTATTT lysS 3200736 - 3199219 - | lysyl-tRNA synthetase prfB 3201822 - 3200746 - | peptide chain release factor 2 TERM 4166 3200805 - 3200839 + g 80 -12.3 -3.44848 | gap 1, overlap 3200802 3200804 TACCGTCCAGTACCG CCTGTGTATTGCGGGT TTCC ACCC-CAGTACGCAGG TCTTTAATGCGGGAA TERM 4167 3201655 - 3201669 + g 70 -7.1 -4.07885 | overlap 3201636 ATCGACGATCGCTTC GAGCG ATGAA CGCTC TTTTCCCAGCGCCTG TERM 4168 3201837 - 3201851 + r 72 -2.8 -4.96996 | TTCACCGGGTTAATT TCAAAC ATG GTCTGA TTTCTTTTATTTGAC TERM 4169 3201912 - 3201887 - R 70 -9.1 -3.30903 | opp_overlap 3201887 3201886 AAAATGCGGTTATAA GGGCGAAAT ATTAGCGG ATTTCGCCC CTTAATTACAGCGAA recJ 3203682 - 3201949 - | ssDNA exonuclease RecJ dsbC 3204401 - 3203688 - | thiol:disulfide interchange protein DsbC TERM 4170 3203884 - 3203897 + g 77 -3.8 -5.0707 | overlap 3203891 CCCTTACCTGCCATG GCGT CATCAA ACGC TTTGTTTTTGTCTTT TERM 4171 3203891 - 3203901 + g 81 -4 -5.19879 | overlap 3203884 CTGCCATGGCGTCAT CAAA CGC TTTG TTTTTGTCTTTGGCG xerD 3205321 - 3204425 - | site-specific tyrosine recombinase XerD TERM 4172 3205092 - 3205079 - G 75 -5.9 -4.59109 | CAGATGCTGGAAAAA GCGCC GCAT AGCGC TTAACAGGCGTGCGG fldB 3205434 - 3205955 + | flavodoxin FldB TERM 4173 3205984 - 3206007 + T 85 -12.4 -3.37245 | opp_overlap 3205989 GTACTTCCCTCTCGA CGGAACCGCG TTTA CGCCGTTCCG TTAGTGTTGGCCTGA ygfX 3206421 - 3206008 - | putative inner membrane protein ygfY 3206668 - 3206402 - | hypothetical protein TERM 4174 3207487 - 3207472 - g 70 -9 -3.73336 | overlap 3207474 AGCCGAACTGAATAA CAGCCA ACAG TGGCTG GCGTTGGATATTGAA ygfZ 3206918 - 3207898 + | putative global regulator TERM 4175 3207954 - 3207912 - T 83 -9.9 -4.16279 | gap 2, opp_overlap 3207910 3207912 3207914 GATATCACGTTAAAA GC-CG-GATAGCCTGATAGCG CAA CGCCATCAGGCTCGCACGTGC TGTTCTCGTAGGCCG yqfA 3208673 - 3208014 - | putative hemolysin TERM 4176 3208501 - 3208484 - G 80 -4.8 -5.10461 | TTGAGGCAAGAAAAA GCAGGA TCATGC TCCCGC CATATAAACTGTAGC TERM 4177 3208768 - 3208782 + r 72 -5.8 -4.46854 | GCTAAAATAAATTCG CAAAAT TAA ATTTTG TTTATTATTCAATAA yqfB 3209148 - 3208837 - | hypothetical protein bglA 3209307 - 3210740 + | 6-phospho-beta-glucosidase A TERM 4178 3210748 - 3210775 + T 75 -9.8 -3.55548 | overlap 3210749 3210766 AGCTTTAACTCCTGC ACGTTACCCGCC AGTC GGCGGGTAACAC TTTGAACGAGTCTTA TERM 4179 3210749 - 3210774 + T 81 -13.3 -2.73007 | overlap 3210748 3210766 GCTTTAACTCCTGCA CGTTACCCGCC AGTC GGCGGGTAACA CTTTGAACGAGTCTT STM3052 3211681 - 3210788 - | putative outer membrane protein TERM 4180 3210969 - 3210982 + g 78 -2.3 -5.26875 | TGGTTATTAATTACG CTGCC ATTA GACAG TTTTTTCGTTCCAGA TERM 4181 3211359 - 3211375 + g 70 -5.1 -4.5032 | overlap 3211360 CCCTCTATGTGCTCA GGAGACA GAT TGTCTCG TTTGTTATTGATATA TERM 4182 3211918 - 3211902 - R 71 -3.7 -4.76892 | overlap 3211913 ACAGCAAGGTAAAAA TGATGCA CAA TGAATCA TTAGACTCTAAAAAA TERM 4183 3212111 - 3212098 - R 87 -9.5 -4.24123 | opp_overlap 3212098 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAGACAGTCG TERM 4184 3212098 - 3212111 + r 75 -9.5 -3.53444 | opp_overlap 3212098 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAGACAGTCG gcvP 3215010 - 3212137 - | glycine dehydrogenase gcvH 3215562 - 3215173 - | glycine cleavage system protein H gcvT 3216682 - 3215588 - | glycine cleavage system aminomethyltransferase T TERM 4185 3216649 - 3216624 - G 71 -6.1 -4.28548 | gap 1, opp_overlap 3216625 3216637, overlap 3216625 3216628 ATCCAGCCATGAAAA TCGACCATGCGG GCG CCGCATAG-CGT GTGTTGTTCGTACAA visC 3218339 - 3217137 - | hypothetical protein TERM 4186 3217865 - 3217889 + g 77 -8.6 -4.13767 | gap 1, opp_overlap 3217867, overlap 3217883 CCGCGGCAATCACCA GAC-GCGCGGT TAAC ATCGCGCCGTC TTTTAAAGTCAGGAA ubiH 3219643 - 3218465 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 3220956 - 3219640 - | proline aminopeptidase P II TERM 4187 3220905 - 3220885 - G 75 -12.5 -2.60496 | opp_overlap 3220884 3220884 3220887, overlap 3220884 3220882 3220887 CGGCGCGGCAAAGAT CAGCGCGGC GCT GCCGGGCTG CATTTGCGCCAGTAA TERM 4188 3220956 - 3220974 + g 91 -3.8 -5.5353 | overlap 3220957 ATTCCTGCTGAGTCA TGACATGG CCT CCATTTCG TTTTTTCTTAGTGTA ygfB 3221560 - 3220982 - | hypothetical protein TERM 4189 3221240 - 3221228 - G 77 -4.8 -4.87291 | GAGGCCAAGCAAAAA GTGG TTAAC CCAC CCGGCTAAGGCATCT TERM 4190 3221324 - 3221308 - G 70 -2.9 -4.72486 | opp_overlap 3221312, overlap 3221312 3221314 GATAAAGCTGAAAAA GAAAGCC GTC GTCTTCC AGCGCGTCGCTGGTC TERM 4191 3221348 - 3221312 - G 80 -5 -4.88293 | opp_overlap 3221312 3221327, overlap 3221308 3221314 AAGCTGAAAAAGAAA GC-CGTCGTCTTCCAGCG CGT CGCTGGTCGCCG-CGTGC ATTTTGCGCAGCGCC TERM 4192 3221945 - 3221934 - g 72 -3.6 -4.77157 | overlap 3221941 3221942 TTAACTCAGGAAAAA GCGA AGAC CCGC GATTACGCGGCGAGC ygfE 3221727 - 3222056 + | Z-ring-associated protein ygfA 3222350 - 3222898 + | putative ligase TERM 4193 3223069 - 3223088 + T 86 -11.4 -3.71649 | overlap 3223084 CCTTTCCTTTTTAGA GCCCCTGC CTCG GTAGGGGC TTTCCCGTTTCAGCG TERM 4194 3223267 - 3223246 - T 78 -11.6 -3.0955 | opp_overlap 3223246, overlap 3223244 3223243 AAACCAGAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGCGGAAATTAG TERM 4195 3223246 - 3223267 + T 86 -11.6 -3.54459 | opp_overlap 3223244 3223243 3223246 AAACCAGAGAAAGGA TGGGCAGG TCATCT CCTGCCCA TTTAGCGGAAATTAG serA 3224511 - 3223279 - | D-3-phosphoglycerate dehydrogenase rpiA 3225436 - 3224777 - | ribose-5-phosphate isomerase A TERM 4196 3226001 - 3225975 - g 80 -9.5 -3.92592 | gap 2 AGGTGGAAGATGAAA CGCGCACGCAAGA ACG TCT-GCG-GCGCG GCGAGGTGGTGGGCG iciA 3225590 - 3226483 + | chromosome replication initiation inhibitor protein TERM 4197 3226743 - 3226718 - T 100 -12.5 -4.39828 | opp_overlap 3226714, overlap 3226720 AACACCGGGAGAAAA CGCGGCCTGGA AGCG CCCAGGCCGGG TGAGATTACTGCGTG TERM 4198 3226741 - 3226720 - T 83 -13.7 -2.53422 | opp_overlap 3226714, overlap 3226718 CACCGGGAGAAAACG CGGCCTGGA AGCG CCCAGGCCG GGTGAGATTACTGCG yggE 3227495 - 3226749 - | hypothetical protein TERM 4199 3227316 - 3227340 + g 83 -12.8 -3.19371 | overlap 3227313 GGCCTGCTTCTTCGC CGTCGCCGCG TCCTT CGCCGCGACG TTCACTTCAATCGCT yggA 3228224 - 3227589 - | arginine exporter protein TERM 4200 3228360 - 3228338 - R 72 -8.5 -3.73904 | gap 1 AAAGAGACTGAATAA CGGAT-AGCG GCTA CGCTTATCCG CTCAATAACCAGAGA yggB 3229284 - 3228424 - | mechanosensitive channel MscS TERM 4201 3228546 - 3228557 + g 71 -5.8 -4.25104 | CCCAGTAGACATTTT GCAG GTCG CTGC TTTTACTCCAGACAC TERM 4202 3229472 - 3229491 + r 88 -12.2 -3.64703 | opp_overlap 3229472 ATAACGATAAAAAAA TGGCTTCC CAAG GGAAGCCA TTTCAATCAGCAGAC TERM 4203 3229491 - 3229472 - R 100 -12.2 -5.73339 | opp_overlap 3229472 ATAACGATAAAAAAA TGGCTTCC CAAG GGAAGCCA TTTCAATCAGCAGAC fba 3230590 - 3229511 - | fructose-bisphosphate aldolase TERM 4204 3230641 - 3230628 - R 72 -3.1 -5.00616 | gap 1, overlap 3230631 GGCTTTGGGAAAAAA CACGGG CCG CCC-TG AATGTCAGATCGGCG TERM 4205 3230688 - 3230662 - R 80 -9.5 -3.87373 | gap 1, opp_overlap 3230662 3230685, overlap 3230666 CAGATCGGCGATAAA TCAACGGGCAGG AATC CCTGCCCGT-AA CGATTACTTCTTAGC TERM 4206 3230685 - 3230666 - R 100 -15 -3.6053 | opp_overlap 3230662, overlap 3230662 TCGGCGATAAATCAA CGGGCAGG AATC CCTGCCCG TAACGATTACTTCTT pgk 3231855 - 3230692 - | phosphoglycerate kinase TERM 4207 3231451 - 3231471 + g 76 -3.2 -5.00616 | opp_overlap 3231451 GGCGTCCATCACGAA TACGTCAC ACAGG GCGGCGTA TTTTTTAGACAGCGC TERM 4208 3231479 - 3231495 + g 74 -4.3 -4.69559 | GCGGCGTATTTTTTA GACAGCG CTT CGTCGTC TTTCTTTTCGCCTTT TERM 4209 3231753 - 3231740 - G 71 -9.5 -3.48395 | opp_overlap 3231732 3231728 ATGGTCGGCAGAGAA GCGCG GATA CGCGC GTCGCTGGTCACTTT TERM 4210 3231820 - 3231810 - G 72 -2.4 -4.87665 | opp_overlap 3231818 CCGCACGGATAAAAA CGCG TTT CCCG GCCAGATCCAGATCG epd 3232923 - 3231877 - | erythrose 4-phosphate dehydrogenase TERM 4211 3232534 - 3232521 - G 71 -4.5 -4.62069 | overlap 3232522 GGTTCACGCCAAAAA CGACG GTGG CGTCA AGATCGTTGCTGCCC STM3071 3233297 - 3233722 + | putative DNA-binding protein TERM 4212 3233959 - 3233991 + G 80 -12 -3.40299 | GGCTGCTTACCGATC CTATCGCTGCCGCG TTTGC CCCGGTAGCGATGG TTATCGGTCTGGTCG STM3072 3233748 - 3234326 + | putative inner membrane protein STM3073 3234327 - 3235034 + | putative ABC-type cobalt transport system permease component TERM 4213 3235065 - 3235080 + G 71 -4.6 -4.55798 | TTCCGTCCGATGCGA CACGCC CGCC GGCATG TTTTGATTTCCACTA STM3074 3235022 - 3235699 + | putative ABC-type cobalt transport system ATP-binding component TERM 4214 3236274 - 3236297 + G 89 -8.8 -4.58663 | opp_overlap 3236255, overlap 3236255 3236252 3236252 3236242 CGTCGCGATTAGCCA TGACGCTGCG TTTA CCCGGCGTCA TTTTTCACGGGTGGT STM3075 3235693 - 3236349 + | putative ABC-type cobalt transport system ATP-binding component TERM 4215 3236373 - 3236354 - T 100 -15 -5.56673 | opp_overlap 3236354 AGGGAGAATAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCGTATTA TERM 4216 3236354 - 3236373 + T 100 -15 -4.42619 | opp_overlap 3236354 AGGGAGAATAAAAAA CGGGTCGC CGAA GCGACCCG TTTTATGCCGTATTA tktA 3238384 - 3236393 - | transketolase TERM 4217 3237564 - 3237622 + g 83 -9.5 -4.15044 | gap 2, overlap 3237561 3237565 CAGCCCAACTGTTCG C-GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCCTG TTTGTTCGGCGAACC TERM 4218 3237565 - 3237620 + g 89 -13.2 -3.6761 | gap 1, overlap 3237561 3237564 AGCCCAACTGTTCGC GGGTCAGCGCGATTTCCGCGTCGC-CC AGC GGCGCGCCGTGGGAATCGTGGGTACCC TGTTTGTTCGGCGAA TERM 4219 3238855 - 3238844 - g 73 -5.8 -4.38313 | overlap 3238837 3238845 ACAGTAAAGCGAAAA TCGC GCCG GCGA GCAGCGAATACACTA TERM 4220 3238894 - 3238873 - g 71 -7.3 -3.93664 | gap 1 AGCGAATACACTAAA CGACTGGCAA AAA TTGCC-GCCG CGCTGGGGGATAACA TERM 4221 3239217 - 3239194 - g 71 -4.6 -4.57073 | gap 1 GATCTTGGCGAAAAA CTG-GTGAACT CGC AGTTCTCTCAG CGTCAGGAGTCCGAA yggG 3238660 - 3239418 + | putative Zn-dependent protease speB 3240439 - 3239519 - | agmatinase TERM 4222 3240094 - 3240106 + g 71 -4.8 -4.59773 | AGAGCATACGCTTGC CTGC AGACA GCAG TTTTTCAGCGTGCGC TERM 4223 3240473 - 3240505 + r 84 -10.5 -3.96542 | opp_overlap 3240473, overlap 3240467 GTCAATATAAAAAAA CCCTCCCGCGTCG TTAGGCC CGACGAGGAAGGG TTTGAATTTGTTTAC TERM 4224 3240505 - 3240473 - R 100 -12.7 -5.80817 | opp_overlap 3240473 3240467 GTCAATATAAAAAAA CCCTCCCGCGTCG TTAGGCC CGACGAGGAAGGG TTTGAATTTGTTTAC STM3079.S 3241459 - 3240644 - | putative hydrolase/acyltransferase TERM 4225 3241520 - 3241507 - R 73 -2.5 -5.20333 | TATTGATAATAAAAA TAAAT GCTA ATTTA AAAATATGATTCATA TERM 4226 3241535 - 3241525 - R 73 -4 -4.74504 | ATGCTAATTTAAAAA TATG ATT CATA ACACCTCGCCAATCA TERM 4227 3241702 - 3241670 - R 100 -10 -4.79756 | gap 1, opp_overlap 3241649 TACAGAACGTAAAAA GCCTTTCCGCGATTA ACCC CAA-CGCGAAAAGGC TCTGAAGTCAGAAAA STM3080 3242287 - 3241814 - | putative mannitol dehydrogenase STM3081 3243333 - 3242326 - | putative malate/L-lactate dehydrogenase TERM 4228 3242879 - 3242869 - G 71 -8.2 -3.86897 | overlap 3242870 GTTAGTCCCCAGAAA GCGC TCC GCGC CGCCATACGGCGCAA STM3082 3244363 - 3243347 - | putative zinc-binding dehydrogenase STM3083 3245838 - 3244366 - | putative mannitol dehydrogenase TERM 4229 3245226 - 3245246 + g 74 -6.7 -4.26903 | opp_overlap 3245225 GCGGATCGAGATTAT CGGCAAACG TAA CGATCGCCG TTTTGGTCAAATGAC TERM 4230 3246121 - 3246109 - R 76 -4.9 -4.85177 | AAACCACATGAAAAA CAATA TCT TATTG AATAACACGCCCGCT TERM 4231 3246412 - 3246402 - R 72 -5.4 -4.42806 | GCACGTTGAAACAAA GCTT TCA AAGC CCCTCTGGCCGAGGT STM3084.S 3247847 - 3247098 - | putative regulatory protein TERM 4232 3247126 - 3247153 + g 71 -4.2 -4.58663 | gap 1, opp_overlap 3247126 3247120 AAAAAATCATCAAAA TCTTCCAGC-GAA TCA TCCTGTTGGAAGA TTTTTACCAGCTCAT STM3085 3248783 - 3248052 - | putative outer membrane lipoprotein TERM 4233 3248907 - 3248880 - R 100 -15.8 -4.94487 | overlap 3248905 TTATAAAATATAAAA GGGTCGATTTAA ATAA TTAAATCGACCC ACAAGTGGAATACTC speA 3250903 - 3248927 - | arginine decarboxylase TERM 4234 3250044 - 3250029 - G 77 -8.2 -4.21142 | overlap 3250030 AGCTCAACATAGAAA CGCGCG GACT CGCGCA CGCCGGTCGCGATAT TERM 4235 3250654 - 3250637 - G 85 -9.1 -4.4078 | CTGCGGGAAGCAAAA CAGCGCC GGCA GACGCTG ACCTTGCGCTTCGCG yqgB 3251043 - 3250912 - | putative inner membrane protein TERM 4236 3251119 - 3251102 - R 75 -6.3 -4.52703 | opp_overlap 3251114, overlap 3251092 GAAACCACGAGAAAA CTCTTGC GTTA ACAAGAG CGCCCTTGTTCAGTC TERM 4237 3251356 - 3251380 + r 70 -5 -4.52589 | gap 1, overlap 3251360 ACCCGGCTGGAAGTG GCGACACGAAG AAAA CGTCGTGT-GC TTTTGTATGAGCCGC yqgD 3251637 - 3251338 - | putative inner membrane protein TERM 4238 3251393 - 3251403 + g 81 -8.2 -4.36914 | TGCTTTTGTATGAGC CGCG CGT CGCG TTTTATACCCAGAAC TERM 4239 3252169 - 3252157 - g 83 -7.7 -4.59853 | opp_overlap 3252157, overlap 3252159 TGAAGTGCGTAAAAA TGGCA CCC TGCCA TGGTTGCGTCCGGAT TERM 4240 3252826 - 3252812 - g 74 -7.8 -4.11869 | GAAAAAACCGACAAA GCGCAA CTG CTGCGC GATGCTGCCGGTCTG metK 3251693 - 3252847 + | S-adenosylmethionine synthetase TERM 4241 3252920 - 3252902 - f 79 -11.7 -3.18582 | opp_overlap 3252902 TACCGTACTTATCAA GGCCAGC GCTCT GCTGGCC TTTATCATTGCTGAT TERM 4242 3252902 - 3252920 + F 95 -12.4 -4.08546 | opp_overlap 3252902 TACCGTACTTATCAA GGCCAGCG CTC TGCTGGCC TTTATCATTGCTGAT TERM 4243 3253602 - 3253589 - g 84 -3.1 -5.40072 | gap 1 TGGGTCGTAAAAAAA GCCTGA TGA TC-GGC GCTATCCTGTTCGTC TERM 4244 3253934 - 3253946 + G 76 -10.5 -3.69323 | GCCCGCGCTGGTTTG CGGCG AAA CGCCG TTTCCATGATGCTGA galP 3253339 - 3254733 + | galactose/proton symporter TERM 4245 3254742 - 3254768 + F 100 -21 -5.08601 | CGACTAATCCCTCCA CGCTTCCTCCTG CCA CAGGAGGAAGCG TTTTTCTTGCAGTCC TERM 4246 3255257 - 3255243 - g 74 -11.4 -3.28712 | opp_overlap 3255234 3255253 CGTCCGCCGTCATAA CCGCGT AGT ACGCGG CGAAGCGGTTTATCG sprT 3254812 - 3255309 + | hypothetical protein TERM 4247 3255309 - 3255329 + F 79 -9.7 -3.72695 | opp_overlap 3255319 ACTGGTCGCCGGGTA GTTCCCGAA ACG TCCGGGAAC TTTCCTGAGCGGACT TERM 4248 3255427 - 3255448 + G 80 -8.7 -4.07568 | TAATTTTTCTTTTGC CGCTGCG TTGCTGGC CGCAGCG TTTTCAGGCCAGGCC TERM 4249 3255521 - 3255538 + G 74 -6.9 -4.26076 | opp_overlap 3255501 3255500 3255515 AGCGTCAAAGTCAAT GCTGACG CGCC CGGCAGC TTTTACTGCGGGTGC endA 3255404 - 3256111 + | DNA-specific endonuclease I TERM 4250 3256604 - 3256568 - g 74 -2.2 -5.06816 | overlap 3256569 3256570 3256589 ACGTCTGAACAAAAA GC-GCCAGCAGTGGCAGA AGA TC-GCCATCGCCGCCTGC GAACAATGCGGGCGT yggJ 3256188 - 3256919 + | hypothetical protein TERM 4251 3257432 - 3257446 + G 74 -7.8 -4.14392 | AACCGCTGGACGGTA TGGGCG GCG CGTCCA TTTTCCGCGTTAAGG gshB 3256939 - 3257886 + | glutathione synthetase TERM 4252 3258021 - 3257999 - f 78 -12.8 -2.59431 | opp_overlap 3257999, overlap 3257995 TTGCCCGATAAGGCA GCCGTCCTTT GGC AAAAGACGGC TTATATGAGTGACAA TERM 4253 3257999 - 3258021 + F 79 -10.6 -3.51924 | opp_overlap 3257999 3257995 TTGCCCGATAAGGCA GCCGTCCTTT GGC AAAAGACGGC TTATATGAGTGACAA yqgE 3258102 - 3258665 + | hypothetical protein TERM 4254 3258717 - 3258705 - g 70 -3.3 -4.83169 | ACTTCGGCACAAAAA GCATC GGC GTTGC AATAGGACAACGCAT TERM 4255 3258853 - 3258815 - g 71 -9.5 -3.53761 | GAACGTTTGCTGAAA GAGTGGCAGCCGGACGA AATTA TTGTCGGGCTACCGCTC AATATGGATGGCACT yqgF 3258665 - 3259081 + | Holliday junction resolvase-like protein STM3098 3259814 - 3259128 - | putative transcriptional regulator yggR 3260926 - 3259946 - | twitching motility protein TERM 4256 3260709 - 3260685 - G 78 -13.5 -2.52896 | overlap 3260644 TGATGTGTGAACGCA CTGGCGCGCAG GCG CCGCGTGCCAG ACAGCGAGACGGCGA TERM 4257 3261001 - 3260987 - g 70 -5.6 -4.38154 | opp_overlap 3260989, overlap 3260989 ACATCCGGGACAAAA TCTCCG CCG CGGCGA CGCGTTGCGGCCGCT TERM 4258 3261077 - 3261058 - g 71 -5.7 -4.23781 | overlap 3261059 GTGAGTAAAACCAAA CCTGCGA GCGACA TCGCAGA AGCCATTGCCGCCGG TERM 4259 3261170 - 3261140 - g 74 -2.5 -5.00884 | opp_overlap 3261127, overlap 3261127 3261141 AGGGGGTGGAAAAAA TCCGCCACTTTCA GGAAG CGAAAGTGGAAGG CCTGCACTGGCACTT yggS 3260944 - 3261648 + | hypothetical protein yggT 3261667 - 3262233 + | putative integral membrane protein yggU 3262230 - 3262520 + | hypothetical protein TERM 4260 3262582 - 3262595 + G 70 -6.7 -4.21098 | opp_overlap 3262567, overlap 3262567 GTGCGCGAGCTCGCG TCGCT GTTA AGCGA TTTTGGGCTTGATGT TERM 4261 3263088 - 3263060 - g 91 -3.7 -5.4505 | opp_overlap 3263087, overlap 3263062 3263084 CCCGTGAAGAAAAAA GCGCGATTTCCCA CCG TGGACAAGCGCTC AAGCTGCTGCTGGAT yggV 3262528 - 3263121 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 4262 3264188 - 3264211 + G 73 -5.3 -4.6644 | opp_overlap 3264173 3264195 TGCGAGCAATACTGG CAGATTACC CGGCAC GGTAAACTG TTTTTAAACTCTCTT yggW 3263114 - 3264250 + | coproporphyrinogen III oxidase TERM 4263 3264305 - 3264254 - T 95 -12.5 -3.9461 | gap 3, opp_overlap 3264304, overlap 3264255 3264257 CTCGCGGAATAACAA GGATAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTA-CC GACCTGTGGCGGTTA TERM 4264 3264305 - 3264255 - T 88 -14.9 -2.96444 | gap 2, opp_overlap 3264304, overlap 3264254 3264257 TCGCGGAATAACAAG GATAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTACC GACCTGTGGCGGTTA TERM 4265 3264303 - 3264257 - T 85 -13.9 -3.03309 | gap 2, overlap 3264254 3264255 GCGGAATAACAAGGA TAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTA CCGACCTGTGGCGGT yggM 3265348 - 3264341 - | putative periplasmic protein TERM 4266 3264799 - 3264810 + g 74 -4.4 -4.77165 | CGTCCGCTTCTTTTT TAGC TACC GCTA TTTTCTTATCCAGGG TERM 4267 3265214 - 3265249 + g 70 -7 -4.2142 | gap 1, opp_overlap 3265216 TAAGGTAATGGAATC CAGTTTAAGTATGCCGT GGT ACTGCTTAC-TAAACTG TTCTTTTAAGATGTT TERM 4268 3265474 - 3265450 - R 73 -10 -3.34715 | gap 1, opp_overlap 3265451 3265452, overlap 3265448 3265452 GAGGTCTTCCAAAGA TAGCCCCGGCC TTCC GACCGGGGC-A TTATCTTTAATACTG TERM 4269 3265451 - 3265474 + r 77 -9.4 -3.87323 | opp_overlap 3265450 3265448 3265452, overlap 3265452 AGGTCTTCCAAAGAT AGCCCCGGCC TTCC GACCGGGGCA TTATCTTTAATACTG TERM 4270 3265452 - 3265473 + r 82 -12.9 -2.91671 | opp_overlap 3265452 3265450 3265448, overlap 3265451 GGTCTTCCAAAGATA GCCCCGGCC TTCC GACCGGGGC ATTATCTTTAATACT TERM 4271 3265473 - 3265452 - R 100 -15.1 -3.24232 | opp_overlap 3265451 3265452, overlap 3265450 3265448 GGTCTTCCAAAGATA GCCCCGGCC TTCC GACCGGGGC ATTATCTTTAATACT ansB 3266527 - 3265481 - | L-asparaginase II TERM 4272 3265833 - 3265813 - G 71 -7.5 -3.95073 | TCGCATAGTTATAAA CGATACCGA CTT TCGGCAACG CGGTCAGCTTCGACA TERM 4273 3266675 - 3266697 + r 95 -12 -3.90744 | opp_overlap 3266676, overlap 3266676 AAAAACAGAATAAAA AGGCGCAGAT ACG ATCTGCGCCA TTGTTTAAAAAGGAA TERM 4274 3266696 - 3266676 - R 100 -15.5 -5.35365 | opp_overlap 3266676 3266675 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTGCGCC ATTGTTTAAAAAGGA TERM 4275 3266676 - 3266696 + r 93 -15.5 -2.94232 | opp_overlap 3266676, overlap 3266675 AAAACAGAATAAAAA GGCGCAGAT ACG ATCTGCGCC ATTGTTTAAAAAGGA yggN 3267435 - 3266716 - | hypothetical protein TERM 4276 3267457 - 3267476 + r 73 -10.6 -3.03203 | opp_overlap 3267456 3267455 CCCTCAAGACAAAGC GGGCCGGC ATTT GCCGACCC TGTACTTATTAGTCC yggL 3267811 - 3267485 - | hypothetical protein TERM 4277 3267633 - 3267649 + g 70 -6.5 -4.18488 | CAGGCCAGGTAGCCG CTGCCGT CAA ACGCCAG TTTATTAGGCTCAAT trmB 3268530 - 3267811 - | tRNA (guanine-N(7))-methyltransferase TERM 4278 3268161 - 3268189 + g 83 -9.5 -4.08394 | TTTTATGCAACACTT CTACCGCGTCATG GCA CATGACGCGCAGG TTTTCAACGCCCTCT TERM 4279 3269199 - 3269220 + G 74 -6.5 -4.25283 | gap 1, opp_overlap 3269199 TGAGCGAGCAAGTGA CGCCCGCACG CGG CGTG-GAGCG TTTTAATCAGGCGAT mutY 3268685 - 3269737 + | adenine DNA glycosylase TERM 4280 3269948 - 3269926 - g 77 -4.1 -4.99861 | GATTAACGAGAAAAA GCTCAACAT GATGA ACGCCGAGC ACCGTAAGCTGCTGG yggX 3269765 - 3270040 + | hypothetical protein TERM 4281 3270657 - 3270640 - g 80 -9.1 -4.08945 | opp_overlap 3270654, overlap 3270641 3270652 ATTACTTGCTGAAAA CGCGGCT CAAA AGCCGCA GTAACGGCCTGCGTA mltC 3270153 - 3271238 + | murein transglycosylase C nupG 3271455 - 3272711 + | nucleoside transport TERM 4282 3272721 - 3272772 + T 95 -14.7 -3.51708 | gap 2, overlap 3272722 CATTAATCCTTGCCC TGTT-TC-GCAGGCCGGATAAGGTG TAAA TGCCTTATCCGGCCTGCAGGCAACG TTACTTTAAAACATA TERM 4283 3272722 - 3272771 + T 90 -16 -2.70704 | gap 2, overlap 3272721 ATTAATCCTTGCCCT GTT-TC-GCAGGCCGGATAAGGTG TAAA TGCCTTATCCGGCCTGCAGGCAAC GTTACTTTAAAACAT speC 3274908 - 3272773 - | ornithine decarboxylase TERM 4284 3273813 - 3273800 - G 73 -5.2 -4.56597 | TTGTGCGGGCAAAAA CGCG CCTGGC CGCG AATATGGTTATCTTT TERM 4285 3275015 - 3275045 + H 73 -9.9 -3.41602 | opp_overlap 3275014 3275017 3275024 CCGACCGCCAGACAT CAGTAAAAACAGA CTGTT TCTGATTTTACTG TTGTCCTGCAGTGAG TERM 4286 3275036 - 3275024 - H 71 -3.4 -4.79826 | opp_overlap 3275015, overlap 3275017 3275014 AGACATCAGTAAAAA CAGA CTGTT TCTG ATTTTACTGTTGTCC TERM 4287 3275530 - 3275545 + G 72 -2.4 -4.93877 | overlap 3275516 3275532 GGCGACGCTGGTCGG CGCGCT TATC GGCGAG TTTTGTTTGCTGGAA TERM 4288 3275796 - 3275810 + G 77 -11.4 -3.53563 | overlap 3275791 3275802 3275804 CCTGTTCGCTTGGCA TCGCCG TTT CGGCGA TTTGCGCGCCGATGT TERM 4289 3276013 - 3276028 + G 74 -2.4 -5.12617 | overlap 3276012 3276013 3276022 GGCGATGCCGATCTC CGCCGC ATGG GCGATG TTTTTTGCCTGATTC yqgA 3275333 - 3276040 + | putative inner membrane protein TERM 4290 3276188 - 3276172 - T 73 -10.9 -2.62616 | opp_overlap 3276171 3276170 3276167 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA STM3117 3276814 - 3276380 - | putative lactoylglutathione lyase STM3118 3278150 - 3276825 - | putative acetyl-CoA hydrolase STM3119 3278702 - 3278175 - | putative monoamine oxidase TERM 4291 3278639 - 3278609 - G 78 -6.8 -4.60487 | overlap 3278611 GACGATGTTCAAAAA CATCACCGGGATGA AAA TCCTCCCAGTAAAG ACCCGAAATTTCTCG TERM 4292 3278637 - 3278611 - G 71 -8 -3.91506 | overlap 3278609 CGATGTTCAAAAACA TCACCGGGATGA AAA TCCTCCCAGTAA AGACCCGAAATTTCT STM3120 3279568 - 3278726 - | putative transcriptional regulator TERM 4293 3280221 - 3280232 + G 100 -4.4 -5.94597 | ATTGCACTCTCGATT CTCA AAGA TGAG TTTTTTTTACTCTTC STM3121 3279660 - 3280538 + | putative transcriptional regulator STM3122 3282325 - 3280586 - | putative arylsulfatase TERM 4294 3281163 - 3281175 + g 70 -5.5 -4.46212 | overlap 3281164 GTATTAATTCCCCCC TGACC GCT GGTCG TTTTGTGATAGCGAC STM3123 3283578 - 3282394 - | putative arylsulfatase regulator TERM 4295 3283331 - 3283320 - G 74 -7.2 -4.08216 | CGATTCCGGCTAAAA GCGG TTCA CCGC CTTGCCAGACAAAAT TERM 4296 3283671 - 3283695 + H 70 -5 -4.42386 | gap 1, opp_overlap 3283662 3283673, overlap 3283673 GCAGAATGCCGAGAG CAGGCTGTATC TATT GATAC-GCCGG TTTTCTGCATAGCGC TERM 4297 3283834 - 3283819 - H 76 -9 -3.68435 | overlap 3283817 CGTCTCAAAAGAATA TCGTCC TGAA GGACGA GAACTCACGGCATTT TERM 4298 3283891 - 3283903 + H 74 -3.5 -5.00616 | opp_overlap 3283891 AAAAAATCATATTAA TAATT TTA AATTA TTTTTTAGAAAACCA TERM 4299 3284168 - 3284180 + G 84 -3.3 -5.36965 | GCGCAACTCATTCCT CTGTC GTC GGCGG TTTTTTATCGTGTTA STM3124 3284090 - 3284773 + | putative response regulator STM3125 3285434 - 3284877 - | putative cytoplasmic protein STM3126 3286911 - 3285412 - | putative amino acid transporter STM3127 3287494 - 3287120 - | putative cytoplasmic protein STM3128 3288810 - 3287509 - | putative oxidoreductase TERM 4300 3288908 - 3288874 - H 70 -5.1 -4.386 | opp_overlap 3288874, overlap 3288892 TAACGTTTTACAAAA TATCGTCCGGAAGAA TGACG TTCTTTGGAACGATA TTCAGTTCCAGGCAA TERM 4301 3288983 - 3289006 + G 74 -2.4 -5.00616 | overlap 3288985 TCTGATGAGCGACGT GACATTACTT GCCG AAGTAACGAC TTTTTTACGCCAACG STM3129 3288972 - 3290456 + | putative NAD-dependent aldehyde dehydrogenase STM3130 3290972 - 3290592 - | putative cytoplasmic protein STM3131 3291457 - 3290972 - | putative cytoplasmic protein TERM 4302 3292009 - 3291998 - R 82 -3 -5.46698 | GTGAAAACTAAAAAA TGAT TTAA ATCA AAAAACAAACTATTC STM3132 3293106 - 3292183 - | putative xylanase/chitin deacetylase STM3133 3294023 - 3293145 - | putative amidohydrolase TERM 4303 3293586 - 3293605 + g 73 -6.4 -4.43189 | opp_overlap 3293586 ACCCACCTTTGCAAA TGGCAGTT GAAA AACAGCCA TTTTATCGCCTTCCT TERM 4304 3294278 - 3294256 - R 74 -10.8 -3.27653 | overlap 3294254 ACCCTTACCACAATA TTATTTTCAG CAT CTGAAAATAA TCAGGCAAACTAAAT TERM 4305 3294297 - 3294323 + r 78 -6.5 -4.59773 | opp_overlap 3294299, overlap 3294299 GGCAAACTAAATGAT AACGCGCTGGT ATAAA ACCAACGCGTA TTTTTACCGATAAGG TERM 4306 3294321 - 3294299 - R 86 -11.3 -3.66643 | opp_overlap 3294299 3294297 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4307 3294299 - 3294321 + r 77 -9.1 -3.91506 | opp_overlap 3294299, overlap 3294297 CAAACTAAATGATAA CGCGCTGGT ATAAA ACCAACGCG TATTTTTACCGATAA TERM 4308 3294370 - 3294347 - R 85 -12.4 -3.38326 | overlap 3294349 GATAAGGGTAATGAA GACGGCCACC CGAA GGTGGCCGTT AGAACCCGGTAGCGC TERM 4309 3294368 - 3294349 - R 100 -15 -3.25539 | overlap 3294347 TAAGGGTAATGAAGA CGGCCACC CGAA GGTGGCCG TTAGAACCCGGTAGC STM3134 3295723 - 3294419 - | putative permease TERM 4310 3295806 - 3295795 - H 76 -4.4 -5.04325 | opp_overlap 3295799 CTGAAATCACAAAAA TTGG TTGA CCAA TCAATATTTTCTCAT TERM 4311 3295840 - 3295855 + H 71 -7.5 -4.01135 | GACCGGTCAAAATCT GGCGG CAACTC CCGCC TTTAATATTCTTGAA STM3135 3296128 - 3297312 + | mannonate dehydratase TERM 4312 3297320 - 3297344 + F 100 -16.5 -3.62275 | GCAAATAACCTTCTT TCGCATGGCGC GAC GCGTCATGCGA TTTCCCCTACTCAAT TERM 4313 3297861 - 3297816 - g 87 -8.3 -4.66163 | gap 1, opp_overlap 3297830 3297831 ACCGTGACCGAAAAA GGCTACTG-CACCGACCCCGCC AGC GGCGAGCTTGATGTCAATAACC CGCTGATCCAAAACG STM3136 3297423 - 3298895 + | putative D-mannonate oxidoreductase TERM 4314 3299851 - 3299863 + G 76 -10.5 -3.68619 | GTTCCGCCTGCTGGG GCCGG ATA CCGGC TTTGACTCCATTGGC STM3137 3298907 - 3300319 + | glucuronate isomerase TERM 4315 3300490 - 3300457 - T 100 -16.9 -3.18582 | opp_overlap 3300467, overlap 3300444 3300458 GAGGTTACTGATTAA TCCCGAATCACTTAC TAAG GTAAGTGATTCGGGT AAACAAACACAGCCA TERM 4316 3300489 - 3300458 - T 100 -20.4 -2.50935 | opp_overlap 3300467, overlap 3300457 3300444 AGGTTACTGATTAAT CCCGAATCACTTAC TAAG GTAAGTGATTCGGG TAAACAAACACAGCC STM3138 3301677 - 3300619 - | putative methyl-accepting chemotaxis protein TERM 4317 3302334 - 3302298 - R 100 -13.8 -3.81488 | gap 1, overlap 3302300 CGCTGGTAAACACAA CAGGCGGGATATCGGCA CCCA CGCCGATATCCCGAC-G AGAATGACCCCGTTA TERM 4318 3302333 - 3302300 - R 100 -17.5 -3.49232 | overlap 3302298 CTGGTAAACACAACA GGCGGGATATCGGCA CCCA CGCCGATATCCCGAC GAGAATGACCCCGTT gsp 3304203 - 3302347 - | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase TERM 4319 3303488 - 3303501 + g 77 -4.5 -4.83615 | ATAACGTGCCCGTTC GCCTG TACA TAGGC TTTTTGTAACGGATC TERM 4320 3303880 - 3303855 - G 75 -12.5 -2.62184 | gap 1 CCTTTTGCCAGATGA GCAGCGCCCCGG CCT CCGGCGCGC-GC GGCGAACCGTTCGGG yghU 3304430 - 3305296 + | putative glutathione S-transferase YghU STM3141 3306074 - 3305364 - | hypothetical protein TERM 4321 3305919 - 3305869 - G 88 -11.2 -4.07568 | gap 3, overlap 3305854 CGGTTCGTCGTAAAA GGCGCGACCCGCA-GCGCCCGCCCG CTTT CCAGCA-GCGCCTGCGGAT-GCGCC AGGTTCGCCGAAGCA STM3142 3307126 - 3306074 - | putative periplasmic ferrichrome-binding protein TERM 4322 3306368 - 3306344 - G 80 -10.7 -3.86897 | GCGATTCTGGACAAA GATCACCTGTG GAT CCCAGGCGATC ACCTGCTCCATTGTC TERM 4323 3306800 - 3306820 + g 78 -6.7 -4.59773 | opp_overlap 3306797 3306799 CGTGACAAACACCAC CTGCGGGCG CAG CGCCACCAG TTTTTCAGGATCAAC TERM 4324 3307111 - 3307091 - G 80 -9.7 -3.96447 | CCAGCAAAAAAGCAA CGCCAGC AGAGAGA GCTGGCG CAAAAATTTATTCAT TERM 4325 3307132 - 3307179 + r 82 -13 -2.79302 | opp_overlap 3307143 3307161, overlap 3307143 ATTTATTCATAGGTT TCGCCCCATAATCGATATATAA ATAA TTATATAACGATTATAGAGCGA TATAATAGAGGTGAT hybG 3307450 - 3307202 - | hydrogenase 2 accessory protein HypG hypA 3307819 - 3307478 - | hydrogenase nickel incorporation protein HybF hybE 3308300 - 3307812 - | hydrogenase 2-specific chaperone hybD 3308787 - 3308293 - | hydrogenase 2 maturation endopeptidase hybC 3310490 - 3308787 - | hydrogenase 2 large subunit TERM 4326 3309461 - 3309473 + g 74 -10.5 -3.50335 | TAGTGCCTTCCCACG GCGCC TGC GGCGC TTCATCTTTGTACCA TERM 4327 3310016 - 3310032 + g 70 -9.5 -3.40382 | opp_overlap 3310019, overlap 3310019 ACTGACCGCTGGCGA CAAGATC CTT GATCTTG TTCTGAACTTTCGTG TERM 4328 3310509 - 3310520 + r 76 -4.4 -5.07652 | overlap 3310498 3310503 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3311665 - 3310487 - | putative hydrogenase 2 b cytochrome subunit TERM 4329 3310633 - 3310613 - G 74 -8.3 -3.95911 | AATAGAAATCAACAA TTCTTCCCA GGT TGGGAAGTA GTGGTAGCCGCCACC TERM 4330 3311637 - 3311647 + g 77 -8.2 -4.21462 | TTACTGATGATTTTT CCGC CCA GCGG TTTTGGATCATGACT hybA 3312641 - 3311655 - | hydrogenase 2 protein HybA TERM 4331 3312231 - 3312248 + g 76 -2.7 -5.00616 | gap 1, overlap 3312235 TTTGTCATAGTGGAC GATGCCGG TTT TCGG-ATC TTTTTTCAGCGCCGA TERM 4332 3312298 - 3312311 + g 74 -6.7 -4.29106 | CAGTTAGGATCGACG CAGTG CATA CACTG TTTCTTGATGTAGGC hypO 3313762 - 3312644 - | hydrogenase 2 small subunit yghW 3314239 - 3313952 - | putative cytoplasmic protein TERM 4333 3314249 - 3314282 + r 100 -17.1 -3.05384 | ATTCATCTGACCTCC TTAGTCGCTATATAA TAAA TTATATAGCGACTAA TTAAATGAAGGCCAG TERM 4334 3314297 - 3314309 + r 89 -6.2 -5.27477 | ATTAAATGAAGGCCA GCGC ATTAC GCGC TTTTTTGCTTCACAT STM3152 3315967 - 3314324 - | putative methyl-accepting chemotaxis protein TERM 4335 3314480 - 3314431 - G 76 -10.7 -3.62096 | gap 1, opp_overlap 3314410 GCTCACTAGCGGAAA GCCGGAACTGCTGTACGGAGCGTT GCA AATCCTCCGT-CTGCCGTTCCAGC GCCGCCGCCGCCGCG TERM 4336 3316037 - 3316061 + r 79 -2.1 -5.47399 | overlap 3316038 GTTATCGGCAAGGCG CGGAGAATATA TAA TGCATTCTCCA TTTTTTTACAGTTAC yqhA 3316768 - 3316274 - | hypothetical protein TERM 4337 3316649 - 3316636 - G 78 -6.7 -4.62069 | CCGCCAGGGCAAAAA CGTTC GGCA GAACG TGTAGAATTTCCTGG TERM 4338 3316698 - 3316670 - G 71 -4.6 -4.57341 | overlap 3316671 AATTTCCTGGAAAAA TTTTAGCGCTAA AGCGA TCAGCGCCAAAG AGAGGCCAAAATACA STM3154 3317563 - 3317048 - | putative ATP-dependent RNA helicase-like protein TERM 4339 3317746 - 3317732 - g 76 -2.8 -4.99972 | AGAAAACAGTAAAAA TTTGCC TAA GGGAAA GACAAAACTCAGCGA STM3155 3317655 - 3318065 + | putative cytoplasmic protein STM3156 3318052 - 3318456 + | putative cytoplasmic protein TERM 4340 3318468 - 3318454 - f 70 -2.1 -5.08601 | GCACGGCAAGAAAAA TAACC TTCAT GGCTA GTTAACTCTGTTGTG TERM 4341 3318655 - 3318640 - g 85 -6.8 -4.87291 | gap 1, overlap 3318642 TATCCTAAGCAAAAA CAGCCGG CGC CCGGC-G TCCAGGCGAAAATGA TERM 4342 3318654 - 3318642 - g 83 -10.5 -4.05402 | overlap 3318640 TCCTAAGCAAAAACA GCCGG CGC CCGGC GTCCAGGCGAAAATG yghA 3318580 - 3319464 + | oxidoreductase TERM 4343 3319556 - 3319529 - T 100 -9.9 -5.4833 | gap 2 TTAGGCAATAAAAAA GCCGGGT--GGCG ACTT CGCCTTACCCGGC CTACAGCGTCAGCAG exbD 3320002 - 3319577 - | biopolymer transport protein ExbD exbB 3320743 - 3320009 - | biopolymer transport protein ExbB STM3160 3320885 - 3320736 - | putative inner membrane protein TERM 4344 3321829 - 3321812 - g 74 -7.7 -4.13304 | gap 1 AAAGCAGCCTCAAAA TCGCC-GC ATG GCTGGCGA ACCATCCTCAGGTCG metC 3320995 - 3322182 + | cystathionine beta-lyase yghB 3322322 - 3322981 + | hypothetical protein yqhC 3323962 - 3323045 - | putative transcriptional regulator yqhD 3324137 - 3325300 + | putative alcohol dehydrogenase dkgA 3325406 - 3326233 + | 2,5-diketo-D-gluconate reductase A TERM 4345 3326255 - 3326274 + F 100 -15 -5.15969 | TTTATCGCACGCCAT GCCCGACG ATGT CGTCGGGC TTTTTTGCATTCCGA STM3166.S 3326420 - 3327883 + | putative cation transporter TERM 4346 3328367 - 3328348 - g 100 -15 -4.77036 | opp_overlap 3328346 GCTGATGATGAAAAA CTGGCCGC GCTG GCGGCCAG AATTCGTGAGGCATA STM3167 3327928 - 3328383 + | putative diadenosine tetraphosphatehydrolase ygiR 3331109 - 3328938 - | hypothetical protein TERM 4347 3329205 - 3329177 - G 72 -12.4 -2.58544 | opp_overlap 3329176, overlap 3329176 CCGGATCGTGATAAC GCAGCAGCGCCT TATGC AGGCGACGCTGC CTGTCTCCCTTCGGC TERM 4348 3329961 - 3329938 - G 74 -8 -3.97947 | overlap 3329940 GTGATCGAGCAGAAA GAGCAGCCGC CAAA GCAGCCGCGC ATGATATTGATCGAA TERM 4349 3332034 - 3332048 + G 78 -7 -4.63527 | overlap 3332036 CTTAACCTGGTACGA CGGCGG CGC CCGCAG TTTTTACGCTGGTAA TERM 4350 3332171 - 3332143 - g 71 -10.1 -3.57263 | ATCGCGATGGTGAAA GCTCTCGGCGGCG TGC CGACGCCGATGGC GCAAGGCGAACTCTA STM3169 3331597 - 3332580 + | putative periplasmic dicarboxylate-binding protein TERM 4351 3332588 - 3332606 + F 88 -12.4 -3.56821 | opp_overlap 3332583 3332582, overlap 3332582 3332599 ATATGTAAATCTGCC GGGCAGGG TTC TCCTGCCC TTTACAGGATGTAAT STM3170 3332622 - 3333104 + | putative inner membrane protein TERM 4352 3333290 - 3333278 - g 76 -3.3 -5.02074 | opp_overlap 3333280 3333281, overlap 3333279 3333281 TTATTTCGCAAAAAA TGACC GTC GGTCT CGATGGCTTTACGCT TERM 4353 3333535 - 3333523 - g 70 -3.3 -4.82667 | CCATTACAGGAAAAA GAGGG CTA CTCTC CGGCGTTCTCTACGG TERM 4354 3333624 - 3333651 + G 71 -4.9 -4.57569 | overlap 3333624 3333625 TGTCTATTCGCTGGC TAGCGGCGGC-AC CTCT GTCGCCGCC-CTG TTTTTGGCGGGCTAC ygiK 3333115 - 3334422 + | putative transporter sufI 3335879 - 3334467 - | repressor protein for FtsI plsC 3336690 - 3335953 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 4355 3336892 - 3336849 - R 90 -13.3 -3.61103 | opp_overlap 3336866 3336875, overlap 3336866 TAATCCGATCTGAAA CCGTAGGCCGGATAA-GACGC TACT GCGTCGTCATCCGGCA-ACGG CAGAGCGCCGGATGG TERM 4356 3336875 - 3336911 + r 75 -10.9 -3.10905 | opp_overlap 3336849 3336866, overlap 3336866 ATAAGACGCTACTGC GTCGTCATCCGGC AACGGCAGAGC GCCGGATGGCGGC TTAGATGCCTTGTCC parC 3339205 - 3336947 - | DNA topoisomerase IV subunit A TERM 4357 3339306 - 3339265 - R 75 -9.6 -3.48593 | gap 1, overlap 3339267 3339268 3339293 TATTGCCGCAGATAA TACCCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAG-GTG GCGAGGAAGTTAACG TERM 4358 3339305 - 3339267 - R 93 -14.7 -3.31726 | overlap 3339265 3339268 3339293 TTGCCGCAGATAATA CCCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAGGT GGCGAGGAAGTTAAC TERM 4359 3339304 - 3339268 - R 100 -18.2 -2.58822 | overlap 3339267 3339265 3339293 TGCCGCAGATAATAC CCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAGG TGGCGAGGAAGTTAA STM3175 3340182 - 3339316 - | putative regulatory protein ygiW 3340646 - 3340254 - | putative outer membrane protein ygiX 3340798 - 3341457 + | DNA-binding transcriptional regulator QseB TERM 4360 3341479 - 3341499 + G 71 -6.1 -4.37527 | opp_overlap 3341469, overlap 3341482 CGCAACGTCTCAGCC TGCGCGTCA GGC TGACGCTTA TTTTCCTGATTCTGG TERM 4361 3341482 - 3341496 + G 86 -10 -4.29049 | opp_overlap 3341469, overlap 3341479 AACGTCTCAGCCTGC GCGTCA GGC TGACGC TTATTTTCCTGATTC TERM 4362 3341831 - 3341842 + G 81 -2.2 -5.37345 | gap 1, opp_overlap 3341831 TCTGAAGGATGACAA CGACC TCT GG-CG TTTTTTGTGGTTGAA ygiY 3341454 - 3342803 + | sensor protein QseC mdaB 3342910 - 3343491 + | NADPH-specific quinone oxidoreductase ygiN 3343523 - 3343837 + | putative cytoplasmic protein parE 3345854 - 3343962 - | DNA topoisomerase IV subunit B TERM 4363 3344646 - 3344685 + g 71 -4.8 -4.56775 | gap 1, overlap 3344634 3344677 3344678 ATCCTGCGCGGTACA GTCCGCCAGTTTCCCCGGC AAC GCCGGGCC-GCTGGTGAGC TTTTTGCGCACCACT TERM 4364 3344677 - 3344699 + g 84 -3.3 -5.40072 | overlap 3344646 3344678 GGCAACGCCGGGCCG CTGGTGAGC TTTTT GCGCACCAC TTTTTTTGCGGCGCG yqiA 3346463 - 3345882 - | esterase YqiA TERM 4365 3346346 - 3346317 - G 71 -10.8 -3.18239 | gap 1 GAGAGATTCCAGCAA CT-CCGCCGCATC GGCAG GATACGGCGGCAG CTGAGGGACGATCAT icc 3347290 - 3346463 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase yqiB 3347737 - 3347315 - | hypothetical protein TERM 4366 3347404 - 3347414 + g 95 -5.4 -5.30616 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTTGGATAA nudF 3348366 - 3347734 - | ADP-ribose pyrophosphatase NudF TERM 4367 3347761 - 3347813 + g 74 -7.7 -4.20712 | opp_overlap 3347778, overlap 3347769 CTCGTTTTTTAACTC TTGATGATGCAACTGAAGCCATTGC AAA GCGATGACTGCGGCTGCGTTGTCGA TTTTCCCCTCTTCTA TERM 4368 3348300 - 3348287 - G 100 -3.7 -5.95166 | opp_overlap 3348288 3348293, overlap 3348288 TCCAATGAAAAAAAA CCGCG ATAG CGCGT TTCCCGTGCAATAAT TERM 4369 3348299 - 3348288 - G 74 -7.2 -4.15473 | opp_overlap 3348288 3348293, overlap 3348287 CCAATGAAAAAAAAC CGCG ATAG CGCG TTTCCCGTGCAATAA TERM 4370 3348495 - 3348519 + H 72 -5.7 -4.42235 | opp_overlap 3348479, overlap 3348497 GCCAACTTTTTGCAG TGGCGGATTCT GCT AGAATCAGCAA TTATTTTTACAAATT tolC 3348573 - 3350042 + | outer membrane channel protein TERM 4371 3350053 - 3350110 + F 100 -22.9 -2.78384 | overlap 3350052 ATTGATAAGTTATTC GCTGGCGCTGCGCTTATCAGACCTGTG CCCT TGTAGGTCTGGTAAGCGCGGCGCTACC TGTCATAAAGCCGCG TERM 4372 3350390 - 3350373 - g 76 -2.7 -5.00616 | opp_overlap 3350373, overlap 3350374 CTGGCTGTGAAAAAA GCGAT GAAACCGT ATCGC TGTATCAAAACGCTG TERM 4373 3350419 - 3350401 - g 71 -6 -4.25283 | ATCGCTGTATCAAAA CGCTGA TGACTGT TCAGCG GCGAATCCGGGCAAA TERM 4374 3350781 - 3350755 - g 71 -4.2 -4.65895 | overlap 3350756 3350758 TGCGGCAGGTAAAAA CTACGGCGCGGC GCA ACCGGGCCGGAC AATGACCGTACCGAA TERM 4375 3350778 - 3350758 - g 71 -10.3 -3.26405 | overlap 3350756 3350755 GGCAGGTAAAAACTA CGGCGCGGC GCA ACCGGGCCG GACAATGACCGTACC TERM 4376 3350901 - 3350874 - g 71 -10.6 -3.24232 | gap 1, opp_overlap 3350878, overlap 3350872 3350870 CCGTCGCCAAACAGA GCACCATGCAGCG TAG CGCTGC-CGGTAC TTCAACACGTTCGAT ygiB 3350255 - 3350926 + | hypothetical protein TERM 4377 3351296 - 3351315 + G 78 -7.1 -4.63184 | ATGCCGACACGCCAA CGTCGCT GTATGA AGCGGCG TTTTTCCAGTGGATT ygiC 3350932 - 3352095 + | putative glutathionylspermidine synthase ygiD 3352987 - 3352157 - | hypothetical protein TERM 4378 3353390 - 3353375 - g 80 -4.6 -5.00884 | overlap 3353379 ATCTGGTGCAAAAAA GGCAGC AGCC GCTTCC CGGCTCGATAAAACG ygiE 3353086 - 3353859 + | zinc transporter ZupT TERM 4379 3354856 - 3354846 - g 80 -4.6 -5.11389 | overlap 3354853 AGAATATAAAGAAAA CGGC AAA GCCA TGAAGGATGACTATG TERM 4380 3355072 - 3355050 - g 84 -3.3 -5.36364 | opp_overlap 3355066 3355070, overlap 3355051 CGAAAAAGATAAAAA TGCGGGCAT TCTTG ATGCCGGCC CGGCGGGCGGGGCTT STM3191 3354502 - 3355467 + | putative arylsulfate sulfotransferase STM3192 3355503 - 3356297 + | putative arylsulfate sulfotransferase TERM 4381 3356693 - 3356683 - g 91 -6.8 -5.1925 | opp_overlap 3356682 TCACAATTCAAAAAA GCGA AGT TCGC CTGGTATGCGGCTTA STM3193 3356317 - 3356988 + | putative disulfide bond formation protein STM3194 3357003 - 3357680 + | putative disulfide oxidoreductase TERM 4382 3357730 - 3357695 - T 83 -9 -4.21142 | opp_overlap 3357700, overlap 3357700 ACCTGAATAGATAAA CCAAAGCAGAGGTCTG CATT CAGGCCTCTGCTTTTC TCACAATAATTTTAC TERM 4383 3357725 - 3357700 - T 95 -13.3 -4.20552 | opp_overlap 3357700, overlap 3357695 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4384 3357700 - 3357725 + T 100 -15.5 -4.3898 | opp_overlap 3357700 3357695 AATAGATAAACCAAA GCAGAGGTCTG CATT CAGGCCTCTGC TTTTCTCACAATAAT TERM 4385 3357826 - 3357807 - T 100 -12.2 -5.50925 | opp_overlap 3357807 AAGGAATACAAAAAA GCCGATGA CATC TCATCGGC TTTTTTCAACCATGA TERM 4386 3357807 - 3357826 + T 100 -12.2 -5.02074 | opp_overlap 3357807 AAGGAATACAAAAAA GCCGATGA CATC TCATCGGC TTTTTTCAACCATGA ribB 3358504 - 3357851 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4387 3358219 - 3358247 + g 77 -8.1 -4.10429 | opp_overlap 3358224, overlap 3358222 3358224 3358240 CTTCAATGGTCACGG TAAAACCGGTGCC GTA GGCGCTGGTGTTG TTTTCCACCATCATT TERM 4388 3358222 - 3358244 + g 74 -7.6 -4.17762 | opp_overlap 3358224, overlap 3358219 3358224 3358240 CAATGGTCACGGTAA AACCGGTGCC GTA GGCGCTGGTG TTGTTTTCCACCATC TERM 4389 3358224 - 3358242 + g 76 -10.2 -3.68435 | opp_overlap 3358224, overlap 3358222 3358219 3358240 ATGGTCACGGTAAAA CCGGTGCC GTA GGCGCTGG TGTTGTTTTCCACCA TERM 4390 3359159 - 3359136 - g 71 -4.4 -4.58395 | overlap 3359137 3359138 CGCACCCGGGAAAAA CTGGCGCTGC TGGA GCAACGCCTC AGCGAACTGGAAGCT yqiC 3358941 - 3359240 + | putative cytoplasmic protein TERM 4391 3359271 - 3359244 - T 100 -9.8 -4.93316 | opp_overlap 3359249, overlap 3359245 3359246 CAACAAGAGTAAAAA CGTGAACGGGCC TGAC GGCCCGCTCATA TAAGATCTGAATAAT TERM 4392 3359270 - 3359245 - T 82 -11.1 -3.54363 | opp_overlap 3359249, overlap 3359244 3359246 AACAAGAGTAAAAAC GTGAACGGGCC TGAC GGCCCGCTCAT ATAAGATCTGAATAA TERM 4393 3359269 - 3359246 - T 86 -14.6 -2.70991 | opp_overlap 3359249, overlap 3359245 3359244 ACAAGAGTAAAAACG TGAACGGGCC TGAC GGCCCGCTCA TATAAGATCTGAATA glgS 3359523 - 3359314 - | glycogen synthesis protein GlgS TERM 4394 3360235 - 3360199 - g 75 -13 -2.60512 | gap 1, overlap 3360196 GGGAAGAGGAATTTA TCGGCGGCATGGC-GAT TATT ACCGGCCACGCCGCCGT CGCCGGTACACCTTG STM3198 3359781 - 3360401 + | putative inner membrane protein TERM 4395 3360700 - 3360718 + G 74 -6.6 -4.26202 | CCAAAGATCGTATGC GCGTTGAC GTG GTCGTCGC TTTCTTCGTACGTGT yqiK 3360420 - 3362099 + | hypothetical protein TERM 4396 3362119 - 3362140 + T 100 -12.3 -5.9667 | opp_overlap 3362101 3362100 CCGCCATATCTCCTG TCCCTGGTC ATAA GACCGGGGA TTTTTTTATCTTTTT TERM 4397 3362301 - 3362320 + T 79 -10 -3.72576 | gap 1, opp_overlap 3362284 3362294 3362301 GGCTGAAACGGGAAA GCCCC-TCC CGA GGAAGGGGC TTTAATAAGGAAAGG TERM 4398 3362320 - 3362301 - T 86 -11.4 -3.71649 | opp_overlap 3362301, overlap 3362284 3362294 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC TTTAATAAGGAAAGG TERM 4399 3362413 - 3362435 + T 77 -9.1 -3.94051 | opp_overlap 3362409 3362406 3362411 ACAGACAATCAGAGG GGGGGAGAG ATCCC CTCTCACCC TTATTCCTTTACTTT TERM 4400 3362478 - 3362465 - T 83 -2.3 -5.76949 | TAGGTCGAAAAAAAA GCAGC GTCA ACCGC GAGATACGCGTCGAA TERM 4401 3362510 - 3362485 - T 72 -10.5 -2.89742 | gap 1 GTCAACCGCGAGATA CGCGTCGAAACA AAA TGTC-CGACGCG CCTTCAAAATCAGCG rfaE 3363992 - 3362559 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 4402 3363793 - 3363772 - G 72 -11.5 -3.13403 | opp_overlap 3363770, overlap 3363770 3363790 GCGGCGTCATCAATA CCCGTCAGG CCGA CCAGACGGG CGTTCGCTCCCAGAG glnE 3366883 - 3364040 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 4403 3366467 - 3366419 - G 70 -9.4 -3.67622 | overlap 3366415 3366421 CATGCCTAAAATCAA CAGCGGCTGCGGAACGCCCTGC GGGTT ACAGGGGGTTCCCCATTCGCGG CAACAGGCGGCATAC TERM 4404 3366465 - 3366421 - G 73 -10.6 -3.41359 | overlap 3366415 3366419 TGCCTAAAATCAACA GCGGCTGCGGAACGCCCTGC GGGTT ACAGGGGGTTCCCCATTCGC GGCAACAGGCGGCAT ygiF 3368302 - 3367001 - | putative cytoplasmic protein ygiM 3368544 - 3369158 + | putative signal transduction protein TERM 4405 3369407 - 3369392 - g 70 -9 -3.76176 | CAAACTCACGAAGAA TACGCG CTGG CGCGTA CTGAGCGTAAATCCG TERM 4406 3369629 - 3369639 + G 81 -8.2 -4.2679 | overlap 3369628 3369630 CCCTTGCGCGTATTG CGCG TGG CGCG TTTTGCTGCCCGTTA TERM 4407 3370048 - 3370015 - g 73 -5.1 -4.62471 | gap 1, overlap 3370016 3370017 CTTAACGCCGAAAAA CCTCTGGCCGC-GCCA TCA TGGCCACGGCCCGGCG GGCGTGAAACTGGTC cca 3369221 - 3370462 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 4408 3370495 - 3370464 - T 86 -11.6 -3.64822 | opp_overlap 3370458 ACCCCGCCAGCTAAA CGCCATCCGGCA CGATAAAT TGCCTGATGGCG CTGCGCTTATCAGAC TERM 4409 3370548 - 3370535 - T 73 -9.5 -3.30243 | AGTTAGGCCGGACAA GGCGG TACT CCGCC ATCCGGCACGGTCAA uppP 3371391 - 3370567 - | undecaprenyl pyrophosphate phosphatase folB 3371848 - 3371486 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase ygiH 3371952 - 3372563 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 4410 3372780 - 3372802 + T 87 -11.2 -3.97406 | overlap 3372781 TTGCTGTAAACCCGT TGGGGCGGCA TGA TGTCGCCCCC TTTCTCCGCTTTTAC TERM 4411 3372781 - 3372801 + T 88 -14.7 -2.97721 | overlap 3372780 TGCTGTAAACCCGTT GGGGCGGCA TGA TGTCGCCCC CTTTCTCCGCTTTTA gcp 3373827 - 3372814 - | O-sialoglycoprotein endopeptidase TERM 4412 3373237 - 3373205 - G 74 -4.8 -4.77757 | gap 1, overlap 3373209 CCGGAAAAACTAAAA TCCAGCCCCGGACGA TCGG TCATCGGGCGC-GGA AAGACAAAACGCCCC TERM 4413 3374022 - 3374005 - H 74 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3374055 - 3374270 + | 30S ribosomal protein S21 TERM 4414 3374317 - 3374349 + F 80 -7 -4.62475 | gap 1, overlap 3374320 TCGAGTTGTAGTTGT AAGGCCGTGC-TTCC GAAA GGAATGCGCGGCTTG TTTTCGTTTATGCAT TERM 4415 3374320 - 3374346 + F 95 -10.9 -4.40882 | gap 1, overlap 3374317 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTGTTTTCGTTTATG TERM 4416 3374446 - 3374417 - f 70 -9.9 -2.95475 | overlap 3374416 GGCAAGAGAGTAAAT CCCCGGCGCTTAC GCAA GTCAGCGACAGGG GTGAGCAAACGTAGC TERM 4417 3374648 - 3374676 + G 70 -5.4 -4.45517 | gap 1, opp_overlap 3374647 3374646 3374664 3374674, overlap 3374664 3374666 ATAATGAGAAAACCC CT-TCTTTCACCG TAAA CGGTGAAAAACAG TTTTATCACTGCTTT TERM 4418 3374952 - 3374969 + G 71 -9.9 -3.61536 | opp_overlap 3374940 AAAGCGCGGTCTGAG CGCTGAA ATTA TTCAGCG TTTCGCCATTGGCTT TERM 4419 3375831 - 3375805 - g 86 -10.8 -4.11216 | CGTTTAGTGCCAAAA CAGGCGGAAAGC GGC GTTTCCCGCCCG GCTCCGCAGCTAAAA dnaG 3374506 - 3376251 + | DNA primase TERM 4420 3376368 - 3376346 - f 79 -10.6 -3.53012 | TGCCCTCGCTTTAAA TGTCGACAGC TAT ACCGTCGACA CCAATCAAACGAATA TERM 4421 3377024 - 3377004 - g 80 -10.3 -3.83155 | overlap 3377006 GACGAAGATGAAGAA GACGGCGAC GAT GACGCCGCC GATGACGACAACAGC TERM 4422 3377025 - 3377006 - g 85 -12.8 -3.49169 | overlap 3377004 CGAAGATGAAGAAGA CGGCGACG ATGA CGCCGCCG ATGACGACAACAGCA rpoD 3376401 - 3378248 + | RNA polymerase sigma factor RpoD TERM 4423 3378285 - 3378268 - T 100 -14.1 -3.95073 | opp_overlap 3378268 CCGCACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTTATCAGGCC TERM 4424 3378268 - 3378285 + T 100 -14.1 -5.60993 | opp_overlap 3378268 CCGCACACGTATAAA CGCCGCC GCAA GGCGGCG TTTTTTTATCAGGCC TERM 4425 3378356 - 3378341 - T 72 -10.4 -2.90219 | opp_overlap 3378339 CAGAATTTCTACACA GCGCGA GTAT TCGCGC CCTCATTCCCCATTG mug 3378878 - 3378372 - | G/U mismatch-specific DNA glycosylase TERM 4426 3379107 - 3379126 + r 95 -7.8 -5.38054 | opp_overlap 3379104 3379108, overlap 3379108 AAAATCATATAATTA AGCCACTC TAAA GAGTGGCC TTTTTGTTTCTGACA TERM 4427 3379125 - 3379108 - R 82 -11.3 -3.5275 | opp_overlap 3379108 3379107, overlap 3379104 AAATCATATAATTAA GCCACTC TAAA GAGTGGC CTTTTTGTTTCTGAC TERM 4428 3379108 - 3379125 + r 86 -11.3 -3.81748 | opp_overlap 3379104 3379108, overlap 3379107 AAATCATATAATTAA GCCACTC TAAA GAGTGGC CTTTTTGTTTCTGAC yqjH 3379926 - 3379159 - | putative transporter TERM 4429 3380569 - 3380555 - g 100 -7.8 -5.40072 | GCGGGCGGAAAAAAA TCGCGA TTA CCGCGA ACGGCGCGCAATGGC TERM 4430 3380716 - 3380664 - g 71 -4.9 -4.67353 | GGAGTTACGTAAAAA TCCGCAGATGAAGC-GGGCGCTGGA TAACT TCAAG-GCCGTGCTGGATCTGCGGA TAAACCACAGCGATA yqjI 3380158 - 3380805 + | putative transcriptional regulator STM3216 3382367 - 3380802 - | putative methyl-accepting chemotaxis protein TERM 4431 3382728 - 3382688 - R 79 -12.7 -2.78384 | gap 2, opp_overlap 3382683 3382691 3382693 CCGCCTTCTATCAGA GCGCATCCGCCCGGTAAGC CTGTT GCT-ACCGGGCGGATGT-C ATTACCATTGCTACC TERM 4432 3382691 - 3382726 + r 100 -19.9 -2.75957 | gap 1, opp_overlap 3382688, overlap 3382683 3382693 CCTTCTATCAGAGCG CATCCGCCCGGTAAGC CTGTT GCT-ACCGGGCGGATG TCATTACCATTGCTA TERM 4433 3382693 - 3382724 + r 100 -16.7 -2.92246 | gap 1, opp_overlap 3382688, overlap 3382691 3382683 TTCTATCAGAGCGCA TCCGCCCGGTAAGC CTGTT GCT-ACCGGGCGGA TGTCATTACCATTGC aer 3384275 - 3382755 - | aerotaxis sensor receptor TERM 4434 3385546 - 3385528 - g 70 -6.6 -4.08144 | TGGATGAAGTACAAA CCGGCATG GGG CGTACCGG CAAGATGTTTGCCTG TERM 4435 3385801 - 3385791 - g 74 -2.4 -5.07486 | CAGGCGGAACAAAAA GGCG ATA CGCT CCTGGATGGTTTTCG oat 3384678 - 3386084 + | putrescine--2-oxoglutarate aminotransferase TERM 4436 3387405 - 3387379 - g 93 -8.7 -4.70659 | gap 1, opp_overlap 3387398 3387402, overlap 3387382 GGCCATACGCAAAAA GAACCTG-GCCG TTGT CGGCGCAGGCCC GGCGGGGCTGGCTTT TERM 4437 3387402 - 3387382 - g 85 -9 -4.46215 | gap 1, opp_overlap 3387398, overlap 3387379 CATACGCAAAAAGAA CCTG-GCCG TTGT CGGCGCAGG CCCGGCGGGGCTGGC fadH 3386255 - 3388273 + | 2,4-dieonyl-CoA reductase TERM 4438 3388303 - 3388353 + T 83 -13.5 -3.29144 | overlap 3388303 GGCGCTACGCTTATC GG-GCTTACGCCGTCATACCGGTTT TAT AGGCCGGTATGACG-CTTGAGCGCC TTATCGACGGCGTCC TERM 4439 3388303 - 3388352 + T 83 -13.7 -2.57344 | gap 1, overlap 3388303 GGCGCTACGCTTATC GGGCTTACGCCGTCATACCGGTTT TAT AGGCCGGTATGACG-CTTGAGCGC CTTATCGACGGCGTC ygjO 3389490 - 3388354 - | putative methyltransferase ygjP 3389576 - 3390073 + | putative metal-dependent hydrolase TERM 4440 3390575 - 3390591 + G 90 -4.4 -5.39755 | gap 1, overlap 3390578 GCTGATGGCGAAAGG TGTGCCG GAGG CGGC-CA TTTTTTGTGATTATG ygjQ 3390225 - 3390917 + | putative integral membrane protein TERM 4441 3390947 - 3390920 - f 74 -6.9 -4.25104 | TTCTCGCCAGTAAAA TGCCAGAGTGC GTCGCA GCGCACTGGCA AGGGCGGAAAGGCGT TERM 4442 3391891 - 3391881 - g 70 -6.8 -4.1899 | opp_overlap 3391886 CCAGCTTATTGAAAA CCAC GCC GTGG AACATCCGGGGTTGT ygjR 3391006 - 3392004 + | putative dehydrogenase TERM 4443 3392146 - 3392173 + F 93 -12.2 -3.8211 | opp_overlap 3392150, overlap 3392150 GTCACCGGGCAGCCA TAAAGGAATGCG TCAG CGTATTCCTTTA TTGTTGTAAGTGAGA TERM 4444 3392150 - 3392169 + F 81 -8.6 -4.52415 | opp_overlap 3392150, overlap 3392146 CCGGGCAGCCATAAA GGAATGCG TCAG CGTATTCC TTTATTGTTGTAAGT TERM 4445 3392208 - 3392187 - f 86 -14.5 -2.52676 | opp_overlap 3392189 TATTGTTGTAAGTGA GACCTTGCC GAAT GGCAAGGTC TATGCATAAAAGCAA TERM 4446 3392189 - 3392206 + F 74 -11.3 -2.91264 | opp_overlap 3392187 TTGTTGTAAGTGAGA CCTTGCC GAAT GGCAAGG TCTATGCATAAAAGC TERM 4447 3392253 - 3392220 - f 81 -8.1 -4.42386 | opp_overlap 3392224, overlap 3392224 GGTCTATGCATAAAA GCAACGGCTAATGCC ATTC GGCGTTAGCCGTTTT TTTTTTTTGCATAGG TERM 4448 3392249 - 3392224 - f 95 -13.3 -3.76186 | opp_overlap 3392224, overlap 3392220 TATGCATAAAAGCAA CGGCTAATGCC ATTC GGCGTTAGCCG TTTTTTTTTTTTGCA TERM 4449 3392224 - 3392249 + F 100 -15.5 -6.79027 | opp_overlap 3392224 3392220 TATGCATAAAAGCAA CGGCTAATGCC ATTC GGCGTTAGCCG TTTTTTTTTTTTGCA ygjT 3392277 - 3393245 + | putative tellurite resistance protein TERM 4450 3393279 - 3393305 + F 100 -15.2 -5.28942 | opp_overlap 3393279 CTGCCCCGTCAAAAA CGCCCGACAG CGCACAC CTGTCGGGCG TTTTTGTTTAACATG TERM 4451 3393305 - 3393279 - f 100 -15.2 -4.56597 | opp_overlap 3393279 CTGCCCCGTCAAAAA CGCCCGACAG CGCACAC CTGTCGGGCG TTTTTGTTTAACATG ygjU 3393500 - 3394744 + | serine/threonine transporter SstT TERM 4452 3395315 - 3395331 + G 73 -5 -4.65895 | TGTTTCTGGAAAATG GGCTGC TCCCT GCCGCC TTTTTGCCTGGCGAC TERM 4453 3395556 - 3395582 + G 85 -8.7 -4.45577 | opp_overlap 3395556 3395554 CCTTTTCCATAAACA CGGCCTGTCGG CACTA TTGATAGGCCG TTTTATCGCGTTTGT yqjA 3395194 - 3395856 + | hypothetical protein TERM 4454 3396212 - 3396194 - g 76 -8.8 -4.0251 | ACGATGACAACGAAA CGGTACAG TGG CTGTCCCG CTTACGGGAAAGCTC yqjB 3395860 - 3396243 + | hypothetical protein TERM 4455 3396329 - 3396311 - f 76 -7.4 -4.27441 | opp_overlap 3396311 3396310 3396307 ACTATGATTAATAAA GCGGTG TTTAACC CACCGC GTTATTATCGGGATC yqjC 3396388 - 3396756 + | putative periplasmic protein yqjD 3396798 - 3397103 + | putative inner membrane protein yqjE 3397106 - 3397504 + | putative inner membrane protein TERM 4456 3397590 - 3397534 - g 71 -7.2 -3.99805 | opp_overlap 3397553, overlap 3397529 3397564 CGCGAAAAACGTAAA GCG-CTGCTTCTCAGTCAGATCCAGCAG CAA CGGCTGGATCTGTCCGCC-AGCCGTCGC GACTGGCTGGAGACC yqjK 3397501 - 3397800 + | putative inner membrane protein TERM 4457 3397817 - 3397854 + F 100 -20.7 -4.45485 | opp_overlap 3397820, overlap 3397820 ATCTTTTCTTTTATA GCATCGCGCCATCAGGT TATC ACCTGGTGGCGCGATAC TTTTATGCATATCGT TERM 4458 3397851 - 3397820 - f 100 -18.8 -2.62184 | opp_overlap 3397817 3397820 TTTTCTTTTATAGCA TCGCGCCATCAGGT TATC ACCTGGTGGCGCGA TACTTTTATGCATAT TERM 4459 3397820 - 3397851 + F 100 -21 -3.1919 | opp_overlap 3397820, overlap 3397817 TTTTCTTTTATAGCA TCGCGCCATCAGGT TATC ACCTGGTGGCGCGA TACTTTTATGCATAT yqjF 3397945 - 3398430 + | hypothetical protein TERM 4460 3398473 - 3398454 - f 89 -6.4 -5.28481 | opp_overlap 3398449 3398454, overlap 3398463 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTCATCTGAAG TERM 4461 3398454 - 3398473 + F 75 -6.4 -4.50976 | opp_overlap 3398454 3398463, overlap 3398449 TACTCAATTAAAAAA GCGAGG GAATAGCG CCTCGC TTTTGTCATCTGAAG yqjG 3398498 - 3399484 + | putative glutathione S-transferase TERM 4462 3399490 - 3399507 + F 93 -12.7 -3.73647 | CTTTGGCTAATTTCA GGCGTCC TCCG GGACGCC TTATTAATAAATACC TERM 4463 3399941 - 3399963 + G 74 -4.8 -4.77036 | opp_overlap 3399940 3399941 ACGCCGGGCGACAAC CGCTTCGG CCCCGAT CCGAAACG TTTTTCCTGATGGCG yhaH 3399608 - 3399973 + | putative inner membrane protein TERM 4464 3399974 - 3400010 + T 95 -10.9 -4.64861 | gap 1, opp_overlap 3399998, overlap 3399976 3399979 AAACGTTTTTCCTGA TGGCGGCGCGGCGC CGCTTTTAAA GCGCCGCGC-GCTA TTTATTTTCCGGCGA TERM 4465 3399976 - 3399990 + T 95 -12.8 -4.07568 | overlap 3399974 3399979 ACGTTTTTCCTGATG GCGGCG CGG CGCCGC TTTTAAAGCGCCGCG TERM 4466 3399979 - 3400008 + T 100 -14.3 -3.93868 | gap 1, opp_overlap 3399998, overlap 3399976 3399974 TTTTTCCTGATGGCG GCGCGGCGCCGCTT TTA AAGCGCCGC-GCGC TATTTATTTTCCGGC yhaJ 3400908 - 3400012 - | putative transcriptional regulator TERM 4467 3401156 - 3401168 + G 76 -10.5 -3.65542 | opp_overlap 3401144, overlap 3401154 GAACCAGGAAGTGCT GGCGC CGG GCGCC TCTTTTCAGCCTCGA yhaK 3401013 - 3401714 + | putative cytoplasmic protein yhaL 3401738 - 3401902 + | putative cytoplasmic protein TERM 4468 3401942 - 3401905 - T 82 -11.4 -3.57144 | gap 2 GGCCGCAGCCTGAAA TCATGCCGGATGGCGGCG CAAG CGCC-CGATCCGGC-TGA TAACGGGTAGACCCG TERM 4469 3401986 - 3402008 + T 77 -9 -3.99374 | overlap 3401987 3402004 CATCGGGCAACACGC TGCCCCGACG TCA TGCCGGGGCG TTATTATTAATGCGC TERM 4470 3401987 - 3402007 + T 73 -10.3 -2.99142 | overlap 3401986 3402004 ATCGGGCAACACGCT GCCCCGACG TCA TGCCGGGGC GTTATTATTAATGCG yhaN 3403325 - 3402015 - | putative inner membrane protein yhaO 3404682 - 3403351 - | putative transport protein TERM 4471 3403693 - 3403680 - G 70 -5.2 -4.46233 | overlap 3403691 GGAATCCTAAATAAA CGCC AAAGAA GGCG GTCATGACGGCAAAG TERM 4472 3404492 - 3404482 - G 74 -3.2 -4.88711 | overlap 3404491 AGAAGAGAGTAAAAA GACC CAA AGTC CCATCAGGCCAACCT TERM 4473 3404937 - 3404918 - R 100 -15 -5.58179 | opp_overlap 3404918 TATCACAACAAAAAA GGGCGCAC TTTG GTGCGCCC TTTTCTCAACTTCTG TERM 4474 3404918 - 3404937 + r 100 -15 -4.43859 | opp_overlap 3404918 TATCACAACAAAAAA GGGCGCAC TTTG GTGCGCCC TTTTCTCAACTTCTG tdcG 3406362 - 3404998 - | L-serine deaminase TERM 4475 3406396 - 3406431 + r 78 -11.9 -3.06915 | gap 1, opp_overlap 3406394 CGTTCAGCGAAGATC CGT-CGCGGGGCGATC CACAC GATCGCCCCGTTCACG TTACATCGCCTGAGT tdcE 3408726 - 3406432 - | pyruvate formate-lyase 4/2-ketobutyrate formate-lyase TERM 4476 3408254 - 3408222 - G 91 -14.1 -3.05294 | opp_overlap 3408212, overlap 3408212 3408203 GCAAACCGGTTAATA CGCCGGATTTACGGC AGC GCAGCATATCCGGCG AGTAAACATCGAATA tdcD 3409968 - 3408760 - | propionate/acetate kinase tdcC 3411365 - 3410034 - | threonine/serine transporter TdcC TERM 4477 3411267 - 3411252 - G 74 -4.6 -4.70659 | GCGGATAGGGAAAAA CAGCAC CCCG GCGCCG ATGGCGGTACCAAAT tdcB 3412375 - 3411386 - | threonine dehydratase TERM 4478 3412026 - 3412036 + g 74 -6.8 -4.35524 | opp_overlap 3412020, overlap 3412020 GCCGAATAATCACAG GTGG CCG CCAC TTTTGACTTTGGCGC tdcA 3413411 - 3412473 - | DNA-binding transcriptional activator TdcA TERM 4479 3414112 - 3414099 - R 80 -5.9 -4.93365 | opp_overlap 3414099 3414100, overlap 3414100 CCTGATAAGCAAAAA CCCGC CGAA GCGGA TTTTATGAAGAGGTG TERM 4480 3414228 - 3414207 - R 100 -10.1 -5.0925 | opp_overlap 3414207 3414206 CTGTAAAAGCAAAAA CCCGCCAGC TTAC ACTGACGGG GTTTATGAAGAGATG TERM 4481 3414351 - 3414317 - R 75 -10.9 -3.04398 | gap 1, opp_overlap 3414323, overlap 3414323 GCCGCCCTGTAAAAG CA-AAAACCCGCCAGC TTAC ACTGACGGGTTTTATG AAGAGGTGAAACTGA TERM 4482 3414344 - 3414323 - R 100 -10.1 -5.0925 | opp_overlap 3414323, overlap 3414317 CTGTAAAAGCAAAAA CCCGCCAGC TTAC ACTGACGGG TTTTATGAAGAGGTG TERM 4483 3414323 - 3414344 + r 74 -7.2 -4.3739 | opp_overlap 3414323 3414317 CTGTAAAAGCAAAAA CCCGCCAG CTTACA CTGACGGG TTTTATGAAGAGGTG TERM 4484 3414467 - 3414433 - R 75 -10.9 -3.04398 | gap 1, opp_overlap 3414439, overlap 3414439 GCCGCCCTGTAAAAG CA-AAAACCCGCCAGC TTAC ACTGACGGGTTTTATG AAGAGATGATACTGA TERM 4485 3414439 - 3414460 + r 74 -7.2 -4.3739 | opp_overlap 3414439 3414433 CTGTAAAAGCAAAAA CCCGCCAG CTTACA CTGACGGG TTTTATGAAGAGATG TERM 4486 3414460 - 3414439 - R 100 -10.1 -5.0925 | opp_overlap 3414439, overlap 3414433 CTGTAAAAGCAAAAA CCCGCCAGC TTAC ACTGACGGG TTTTATGAAGAGATG TERM 4487 3414583 - 3414549 - R 75 -10.9 -3.04398 | gap 1, opp_overlap 3414555, overlap 3414555 GTCGCCCGGTAAAAG CA-AAAACCCGCCAGC TTAC ACTGACGGGTTTTATG AAGAGATGATACTGA TERM 4488 3414555 - 3414576 + r 74 -7.2 -4.3739 | opp_overlap 3414555 3414549 CGGTAAAAGCAAAAA CCCGCCAG CTTACA CTGACGGG TTTTATGAAGAGATG TERM 4489 3414576 - 3414555 - R 100 -10.1 -5.0925 | opp_overlap 3414555, overlap 3414549 CGGTAAAAGCAAAAA CCCGCCAGC TTAC ACTGACGGG TTTTATGAAGAGATG TERM 4490 3414691 - 3414665 - R 73 -10.3 -3.04398 | gap 1, opp_overlap 3414671, overlap 3414671 GCCGCCCTGTAAAAG CA-AAAACCCGC CGAA GCGGGTTTTATG AAGAGGTGAAACTGA TERM 4491 3414684 - 3414671 - R 100 -9.5 -5.0925 | opp_overlap 3414671, overlap 3414665 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAGGTG TERM 4492 3414671 - 3414684 + r 87 -9.5 -4.3739 | opp_overlap 3414671 3414665 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAGGTG TERM 4493 3414799 - 3414773 - R 73 -10.3 -3.04398 | gap 1, opp_overlap 3414779, overlap 3414779 GCCGCCCTGTAAAAG CA-AAAACCCGC CGAA GCGGGTTTTATG AAGAAGTGAAACTGA TERM 4494 3414792 - 3414779 - R 100 -9.5 -5.0925 | opp_overlap 3414779, overlap 3414773 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAAGTG TERM 4495 3414779 - 3414792 + r 87 -9.5 -4.3739 | opp_overlap 3414779 3414773 CTGTAAAAGCAAAAA CCCGC CGAA GCGGG TTTTATGAAGAAGTG garK 3416355 - 3415210 - | glycerate kinase I TERM 4496 3416006 - 3415968 - G 84 -12.5 -3.33261 | CGCCAATGCCGATAA TGATATTGCTTGCGCCG CTTTC CAGCGCCTGCAATATCA GCTCCCCCGTTCCCC TERM 4497 3416444 - 3416416 - R 71 -10.2 -2.64803 | overlap 3416413 3416412 CCAGTCTGAAATTCA GGCCCGGATCGC TACAC GCCATCCGGGCA CAACGTCGTTAGCGA garR 3417343 - 3416453 - | tartronate semialdehyde reductase TERM 4498 3416816 - 3416827 + g 73 -5.8 -4.42788 | CAACGCCACGATCAC CTGG TTAG CCAG TTTTGTGACGTTGCC TERM 4499 3417013 - 3417027 + g 71 -10 -3.57561 | CAACGCCCTTCGCCT TCAGCG CAT CGCTGA TTTCACGGCTTGCCA garL 3418139 - 3417369 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase TERM 4500 3417500 - 3417517 + g 76 -12.7 -2.71712 | opp_overlap 3417498 3417497, overlap 3417485 3417499 CCGGCGCCAGAATGC CGCACGG TTTA CCGTGCG CTTTAGCGCGGGCGA TERM 4501 3417654 - 3417623 - G 90 -8 -4.82901 | TTGGGCCGACAAAAA TGCCATCAACGC CTTCCGTT GCGGCGATGGCA TCAACATTGTCGACA TERM 4502 3418697 - 3418707 + G 87 -8.2 -4.53303 | opp_overlap 3418696 AAATTCGCCAGGAAT CGCC ATC GGCG TTTTATATAAAAGTA TERM 4503 3419340 - 3419320 - g 100 -12.5 -4.56597 | overlap 3419322 CTCGGTTGCGAAAAA CTGCAGCCG GAA CGGCTGCTG GAAGGCACCGAGGAT TERM 4504 3419338 - 3419322 - g 78 -13.7 -2.60032 | overlap 3419320 CGGTTGCGAAAAACT GCAGCCG GAA CGGCTGC TGGAAGGCACCGAGG TERM 4505 3419515 - 3419495 - g 74 -10.3 -3.57263 | AGCGCCAGCGCGAAA CCTGCCCGG CCT CCGAGCTGG TCGTCGGGATGCAAT garD 3418669 - 3420240 + | galactarate dehydrogenase TERM 4506 3420267 - 3420284 + T 79 -7.7 -4.46493 | opp_overlap 3420267, overlap 3420262 AAGCGCCTCGCAAAA CATGGCT TAAG GGCCATG TTTTCATATGTTTGA TERM 4507 3420284 - 3420267 - T 71 -7 -4.08064 | opp_overlap 3420267 3420262 AAGCGCCTCGCAAAA CATGGC TTAAGG GCCATG TTTTCATATGTTTGA STM3251 3421427 - 3420480 - | putative sugar kinase agaR 3422271 - 3421438 - | AGA operon transcriptional repressor gatY 3422605 - 3423459 + | tagatose-bisphosphate aldolase TERM 4508 3423712 - 3423696 - g 73 -5.1 -4.62069 | opp_overlap 3423708, overlap 3423710 TGCGTACCCGAAAAA TGCCAGT CAC ACCAGCA TGGGTAGAAGAACCC STM3254 3423470 - 3424384 + | putative fructose-1-phosphate kinase STM3255 3424411 - 3425838 + | putative phosphotransferase system fructose-specific component IIB STM3256 3425825 - 3426631 + | phosphotransferase system mannitol/fructose-specific IIA component TERM 4509 3426647 - 3426670 + F 100 -16 -4.72272 | CCTTCATTTGTTCCT CCGTGCCCGC TCCG GCGGGTACGG TTTTTCATGACAAAG TERM 4510 3426819 - 3426808 - f 76 -2.2 -5.29445 | TTCGAAGAAGAAAAA CGAA AGAA CTCG GAGATAAAAGTGAAA TERM 4511 3427252 - 3427270 + G 80 -10.2 -3.85698 | GATCCGATGGTCGTT GCACGCCG TGC CGCCGTGC TTTGTAAAGCAGCAG STM3257 3426829 - 3428100 + | putative tagatose 6-phosphate kinase 1 STM3258 3428115 - 3428579 + | galactitol-specific PTS system component IIA STM3259 3428610 - 3428894 + | galactitol-specific PTS system component IIB STM3260 3428898 - 3430271 + | PTS family galactitol-specific enzyme IIC STM3261 3430315 - 3431358 + | galactitol-1-phosphate dehydrogenase STM3262 3431469 - 3432242 + | galactitol utilization operon transcriptional repressor yraL 3433263 - 3432400 - | putative methyltransferase TERM 4512 3433322 - 3433311 - H 79 -3 -5.41143 | overlap 3433314 CATTGCGTAAAAAAA TATC ACTG GATA CAGTATGGTACCCTC TERM 4513 3434792 - 3434770 - gH 80 -6.2 -4.8048 | overlap 3434771 GTGTTACAGCAAAAA TTCGGCTCCG TAG CCGAGCTGAA AATGGGCGTGAACGG TERM 4514 3434786 - 3434771 - gH 72 -9 -3.47806 | overlap 3434770 TGTTACAGCAAAAAT TCGGCT CCGT AGCCGA GCTGAAAATGGGCGT yraM 3433327 - 3435369 + | putative transglycosylase TERM 4515 3435419 - 3435378 - gf 72 -9.3 -3.61268 | gap 1, overlap 3435370 3435381 CAGCTAACGCGTAAA CAGGCTGGCGACGCGTGGGA AGC TGCCGCGCGTCGCTGGC-TG GAAAGCAAAGGACTG TERM 4516 3435417 - 3435381 - gf 76 -12.1 -2.62667 | overlap 3435370 3435378 CTAACGCGTAAACAG GCTGGCGACGCGTGGGA AGC TGCCGCGCGTCGCTGGC TGGAAAGCAAAGGAC yraN 3435327 - 3435722 + | hypothetical protein yraO 3435744 - 3436334 + | DnaA initiator-associating protein DiaA yraP 3436344 - 3436919 + | hypothetical protein yraR 3437654 - 3436986 - | putative nucleoside-diphosphate-sugar epimerase TERM 4517 3437910 - 3437893 - g 89 -3.3 -5.72207 | GTGAAAGGAAAAAAA GGCGAGG CCAG CGTCACC ATTGATAAGGCTATT yhbO 3437752 - 3438270 + | putative intracellular proteinase yhbP 3438693 - 3438250 - | hypothetical protein yhbQ 3438731 - 3439048 + | GIY-YIG nuclease superfamily protein yhbS 3439538 - 3439035 - | putative transport protein yhbT 3440056 - 3439532 - | putative lipid carrier protein TERM 4518 3440329 - 3440342 + G 80 -9.5 -4.06491 | opp_overlap 3440329 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4519 3440342 - 3440329 - g 83 -9.5 -4.18018 | opp_overlap 3440329 GGCGGCCATCGAAAA CGGCG CTGA CGCCG TTTATATCGGGTTAA TERM 4520 3440451 - 3440411 - g 95 -3.4 -5.81412 | gap 2 TTTACCGAAAAAAAA TTGCAG-GAAGC-GGTGA GTTTTGT TCACCAGCATCGCCGCAA ATTACACATCGCCAT yhbU 3440273 - 3441268 + | putative protease TERM 4521 3442083 - 3442071 - g 75 -6.9 -4.4078 | overlap 3442072 3442073 TCGCGCTAACGAAAA CGGCG GCG CGCCA TTACCGCTTGCCGCG yhbV 3441277 - 3442155 + | putative protease TERM 4522 3442206 - 3442233 + F 75 -6.2 -4.42748 | gap 1, opp_overlap 3442176, overlap 3442207 3442219 AATAGCGATCCCGTA GGCCCGATAAGCG CAG CGCC-ATCGGGCA TTGTTTTTGCCGTCA TERM 4523 3442207 - 3442232 + F 71 -9.7 -3.24926 | gap 1, opp_overlap 3442176, overlap 3442206 3442219 ATAGCGATCCCGTAG GCCCGATAAGCG CAG CGCC-ATCGGGC ATTGTTTTTGCCGTC TERM 4524 3443237 - 3443203 - g 71 -8.4 -3.89215 | overlap 3443197 GGTGATAAAGCGAAA GTCCGCCACGGGCTGG AAT CCATCCTGCGGGAGAC CCAGGCGGATGAAAT yhbW 3442333 - 3443340 + | hypothetical protein STM3277 3444037 - 3443318 - | putative inner membrane protein TERM 4525 3443348 - 3443384 + g 100 -7.3 -5.42259 | opp_overlap 3443349, overlap 3443349 TGGGCTGATTTTATA ACGCCGATTTTCAAC GGTGATG GTTGGCAATCGGCGA TTTTTTTCGAAGTAA TERM 4526 3443349 - 3443383 + g 80 -10.8 -3.84633 | opp_overlap 3443349, overlap 3443348 GGGCTGATTTTATAA CGCCGATTTTCAAC GGTGATG GTTGGCAATCGGCG ATTTTTTTCGAAGTA TERM 4527 3443448 - 3443460 + g 73 -9.1 -3.77927 | overlap 3443447 TATTCCGGCCATGCT TGCGC CTG GCGCA TATTTTCGTCATTCA TERM 4528 3443694 - 3443707 + g 74 -6.7 -4.25056 | TGATAGCGGCTGTTT GGGTT AAGC AACCC TTTGTTGGTGGCATA TERM 4529 3443987 - 3443975 - G 75 -3.5 -4.88067 | AGTGAGCCAGAAAAA TTTTA AAA TAAAA GCGATAAACAGGCTC STM3278 3444196 - 3444726 + | putative cytoplasmic protein TERM 4530 3444754 - 3444778 + T 74 -11.5 -2.79684 | opp_overlap 3444753 3444752 GACTTGTGAAATATT GCCGGATGA AAACAGC TCATCCGGC TCGTTCAATTACTGG mtr 3446031 - 3444787 - | tryptophan permease TERM 4531 3446113 - 3446147 + r 82 -7.8 -4.55798 | opp_overlap 3446119, overlap 3446115 3446117 3446119 AGTACAAAAGAAATA AAAAAAGCCCCGATTG TGA CGATCGGGGCTGTATA TTTTACTTTACGCTG TERM 4532 3446115 - 3446145 + r 84 -10.4 -3.88396 | opp_overlap 3446119, overlap 3446113 3446117 3446119 TACAAAAGAAATAAA AAAAGCCCCGATTG TGA CGATCGGGGCTGTA TATTTTACTTTACGC TERM 4533 3446117 - 3446143 + r 90 -13 -3.51998 | opp_overlap 3446119, overlap 3446115 3446113 3446119 CAAAAGAAATAAAAA AAGCCCCGATTG TGA CGATCGGGGCTG TATATTTTACTTTAC TERM 4534 3446119 - 3446141 + r 100 -15.6 -3.31476 | opp_overlap 3446119, overlap 3446117 3446115 3446113 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT TERM 4535 3446141 - 3446119 - R 100 -13.4 -6.11392 | opp_overlap 3446119 3446117 3446115 3446113 AAAGAAATAAAAAAA GCCCCGATTG TGA CGATCGGGGC TGTATATTTTACTTT deaD 3448074 - 3446185 - | ATP-dependent RNA helicase DeaD TERM 4536 3446906 - 3446916 + g 73 -5.4 -4.56597 | overlap 3446893 AGTTGCTGCTGAACT TTCG CGG CGAA TTTTTCCAGACGGCG TERM 4537 3448219 - 3448194 - R 73 -7.5 -4.04023 | overlap 3448195 ATTAACGAACAACAA CGCCCTCACCC GCGA AGGTGATGGCA ATCAAAAAGATTACG nlpI 3449137 - 3448253 - | lipoprotein NlpI TERM 4538 3449208 - 3449242 + r 76 -12 -2.56715 | opp_overlap 3449215, overlap 3449203 AAGGCGTCCAGCCAG GTCTAAAGCCCTCCGC ACT GCGGAGGGCAAAAGGC TACCTTACTCGGCCT TERM 4539 3449235 - 3449215 - R 100 -18.3 -3.57792 | opp_overlap 3449208 3449203 CCAGCCAGGTCTAAA GCCCTCCGC ACT GCGGAGGGC AAAAGGCTACCTTAC pnp 3451382 - 3449247 - | polynucleotide phosphorylase/polyadenylase TERM 4540 3451601 - 3451585 - R 100 -10.8 -5.00884 | opp_overlap 3451585 3451584 3451582 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC TERM 4541 3451585 - 3451601 + r 71 -10.8 -2.71422 | opp_overlap 3451585, overlap 3451584 3451582 ATCTGCTGGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC rpsO 3451893 - 3451624 - | 30S ribosomal protein S15 TERM 4542 3451728 - 3451749 + g 84 -2.9 -5.34555 | opp_overlap 3451721 3451730, overlap 3451730 3451731 AAACCATACGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTATGCTCTGC truB 3452988 - 3452044 - | tRNA pseudouridine synthase B TERM 4543 3452845 - 3452877 + g 75 -12.6 -2.6176 | overlap 3452844 GCCGGTCGCCAGCGG GTCCAGCGCGCCGG TATGC CCGGCGCGGTTGGC ATTGTAGATGCGCTT rbfA 3453389 - 3452988 - | ribosome-binding factor A TERM 4544 3453433 - 3453419 - R 100 -9.2 -5.61913 | opp_overlap 3453419 AATAAAGACAAAAAA GGGGCC ATA AGCCCC TTTTTAAATTTCTTG TERM 4545 3453419 - 3453433 + r 88 -8.5 -4.86939 | opp_overlap 3453419 AATAAAGACAAAAAA GGGGC CATAA GCCCC TTTTTAAATTTCTTG infB 3456288 - 3453610 - | translation initiation factor IF-2 TERM 4546 3455476 - 3455487 + g 84 -5.8 -5.00616 | ATCGGCTTTGGATTC GGCA TGTT TGCC TTTTTTCGCCGGACG TERM 4547 3456139 - 3456129 - G 74 -8.2 -3.96624 | opp_overlap 3456112 TATCGGGACCAGAAA CCGC TTC GCGG TTCAGGTGCGCCAGT nusA 3457815 - 3456313 - | transcription elongation factor NusA TERM 4548 3457756 - 3457767 + g 75 -3.6 -4.8622 | TTCAAAAATTTTTTC GCGT GGCA GCGC TTTTTCGTTGGAGAC yhbC 3458295 - 3457843 - | hypothetical protein TERM 4549 3458332 - 3458320 - H 93 -6.9 -5.80248 | opp_overlap 3458319 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4550 3458376 - 3458361 - H 100 -10.4 -5.60689 | opp_overlap 3458360 3458361 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA TERM 4551 3458361 - 3458376 + H 72 -10.4 -2.79878 | opp_overlap 3458361, overlap 3458360 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA argG 3458923 - 3460266 + | argininosuccinate synthase TERM 4552 3460288 - 3460303 + T 100 -11.8 -5.29782 | opp_overlap 3460288 GTCGTTGATGCAACA GGCCGC GAAA GCGGCC TTTTTTGTGAATATC TERM 4553 3460303 - 3460288 - T 78 -11.8 -3.08679 | opp_overlap 3460288 GTCGTTGATGCAACA GGCCGC GAAA GCGGCC TTTTTTGTGAATATC STM3291 3461416 - 3460352 - | putative cytoplasmic protein TERM 4554 3461745 - 3461711 - R 78 -11.7 -3.08073 | gap 1, opp_overlap 3461721, overlap 3461721 AGCAGTTTCAACAGA CGAAAAAAAAGACGCT TTTC AGCGTC-TTTCTTTCG GAATATTGGTACCGA TERM 4555 3461736 - 3461721 - R 100 -9 -5.92337 | opp_overlap 3461721, overlap 3461711 ACAGACGAAAAAAAA GACGCT TTTC AGCGTC TTTCTTTCGGAATAT TERM 4556 3461721 - 3461736 + r 86 -9 -4.43208 | opp_overlap 3461721 3461711 ACAGACGAAAAAAAA GACGCT TTTC AGCGTC TTTCTTTCGGAATAT secG 3462184 - 3461852 - | preprotein translocase subunit SecG TERM 4557 3462372 - 3462387 + r 100 -11.8 -4.77157 | TTTTGCGGGCCGTAA GGCGGC AACC GCCGCC TTTTTAGTCACTTAA glmM 3463744 - 3462407 - | phosphoglucosamine mutase folP 3464585 - 3463737 - | dihydropteroate synthase TERM 4558 3464650 - 3464631 - R 100 -12.8 -5.86609 | opp_overlap 3464631 TTAAAAAAAGAAAAA CCCCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA TERM 4559 3464631 - 3464650 + r 79 -10.6 -3.6502 | opp_overlap 3464631 TTAAAAAAAGAAAAA CCCCGGGG CAAG CCCCAGGG TTTCGGTGAGCGCTA hflB 3466624 - 3464690 - | ATP-dependent metalloprotease TERM 4560 3465722 - 3465690 - G 91 -11.9 -4.11394 | opp_overlap 3465681 3465712 ACCTGACGGTCAAAA CGGCCTGGACGCAGC AGC GCCGGGTCCAGAACG TCCGGACGGTTAGTT rrmJ 3467354 - 3466728 - | 23S rRNA methyltransferase J TERM 4561 3467256 - 3467268 + g 77 -4.7 -4.84761 | opp_overlap 3467247 3467250, overlap 3467250 TTTAAACCAGGCACG GGAGC GTA GCCCC TTTTTCTGCGCCTGT TERM 4562 3467522 - 3467505 - g 90 -4.9 -5.34309 | gap 1 AGTACTAAACAAAAA CAGCACCT AAA AGGT-CTG GCACATCCGCTCAAG yhbY 3467481 - 3467774 + | RNA-binding protein YhbY TERM 4563 3467860 - 3467887 + T 86 -13.6 -3.25946 | gap 1, opp_overlap 3467867, overlap 3467867 CACGCTCTCTCCGTT GATAAAAGGCCGC TAT GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4564 3467881 - 3467867 - T 95 -12.8 -4.36914 | opp_overlap 3467860 3467867 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA TERM 4565 3467867 - 3467881 + T 100 -12.8 -5.13137 | opp_overlap 3467867, overlap 3467860 TCTCCGTTGATAAAA GGCCGC TAT GCGGCC TTTTTCCTTTCTTTA greA 3468406 - 3467930 - | transcription elongation factor GreA TERM 4566 3467968 - 3467979 + g 77 -7.2 -4.25104 | CTTCGTATTCCACAT CGCC GCCA GGCG TTTTGATCACCACGA TERM 4567 3468536 - 3468509 - H 70 -4.8 -4.46828 | AGAAGCAAAAAAACA CCAACCCGGG CGCGCAGT CCCAGGTCAG CTACAATTTCCTCTT TERM 4568 3469125 - 3469095 - g 71 -7.4 -3.97947 | GCCAGCCACGATAAA GCGCCAGGCTGGCC GTG GAACGACCTGACGC AGTGTTTCAGCGCGC dacB 3468654 - 3470087 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 4569 3470147 - 3470176 + T 76 -7.7 -4.37092 | opp_overlap 3470152, overlap 3470152 3470170 CTACAAAGAACATAA TAAAACGGGCCGC AAAT GCGGCCCGTTGGC TTTTGTAGGCCGGAT TERM 4570 3470171 - 3470152 - T 100 -16.4 -4.94147 | opp_overlap 3470147 3470152 3470170 AAGAACATAATAAAA CGGGCCGC AAAT GCGGCCCG TTGGCTTTTGTAGGC TERM 4571 3470152 - 3470171 + T 100 -16.4 -3.41587 | opp_overlap 3470152, overlap 3470147 3470170 AAGAACATAATAAAA CGGGCCGC AAAT GCGGCCCG TTGGCTTTTGTAGGC obgE 3471391 - 3470219 - | GTPase ObgE TERM 4572 3470569 - 3470585 + g 71 -7.9 -3.94933 | opp_overlap 3470558, overlap 3470566 3470571 ACCAGCGCGGTTTAG CCGCCAG ATC CTGGCTG TATTTTTCCAGTTCG TERM 4573 3472182 - 3472195 + r 74 -3.7 -4.91852 | opp_overlap 3472182 GCTTACGAAAAATAC GCAGC GGCG GCAGC TTTCTTTTTACTGCC TERM 4574 3472452 - 3472472 + r 100 -14 -3.794 | opp_overlap 3472452 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG TERM 4575 3472472 - 3472452 - R 100 -14 -4.75174 | opp_overlap 3472452 CATCGAATGTAAAAA GCCCCGCA ACAGG TGCGGGGC TTTCATCCGTTACCG rpmA 3472758 - 3472501 - | 50S ribosomal protein L27 rplU 3473089 - 3472778 - | 50S ribosomal protein L21 TERM 4576 3474253 - 3474229 - g 76 -9.3 -3.95051 | opp_overlap 3474235, overlap 3474221 GAAGAAGCCGACAAA GCGATATCCGC GTT GCAGATATTGC CGGATACCCCATGGC ispB 3473347 - 3474318 + | octaprenyl diphosphate synthase nlp 3474550 - 3474837 + | DNA-binding transcriptional regulator Nlp TERM 4577 3474878 - 3474850 - T 100 -13.9 -4.08692 | opp_overlap 3474853, overlap 3474853 TAAGTGCCTGTAAAA CAACCCCCGCA TCGCGTT CGCGGGGGTTG TTCAGCGTACAGAAG TERM 4578 3474853 - 3474875 + T 72 -9.1 -3.63515 | opp_overlap 3474850 3474853 GTGCCTGTAAAACAA CCCCCGC ATCGCGTTC GCGGGGG TTGTTCAGCGTACAG TERM 4579 3474875 - 3474853 - T 83 -9.8 -4.17048 | opp_overlap 3474853, overlap 3474850 GTGCCTGTAAAACAA CCCCCGCA TCGCGTT CGCGGGGG TTGTTCAGCGTACAG murA 3476154 - 3474895 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase yrbA 3476501 - 3476208 - | putative transcriptional regulator TERM 4580 3476626 - 3476644 + r 71 -10.3 -2.62192 | opp_overlap 3476592, overlap 3476625 3476621 TCATGCGAAGTGTAG GCCGGAT AAACC ATCCGGC ATTCATTACATACGG yrbB 3476946 - 3476650 - | hypothetical protein TERM 4581 3476730 - 3476746 + g 74 -2.1 -5.12617 | opp_overlap 3476706, overlap 3476731 TAACGCCAGACAGCG ACACGGC ATT GCCCTGC TTTTTTGCCTGGTTC yrbC 3477581 - 3476946 - | putative transport protein yrbD 3478151 - 3477600 - | putative transport protein yrbE 3478938 - 3478156 - | putative transport protein TERM 4582 3478242 - 3478203 - G 70 -10 -3.3164 | gap 1, opp_overlap 3478215 AATCCAGCCCCAGAA CGGCCAACGATGCGTGAAC CAC GGT-ACGCGTCGTTGCCCG GCTAATCCCGGCAGA TERM 4583 3478810 - 3478797 - G 74 -8.1 -4.0162 | opp_overlap 3478801, overlap 3478782 CGCCCACATTATAAA GCTGG CGCA CCAGC AGCGGCGCATGTTTG yrbF 3479758 - 3478946 - | putative ABC transporter ATP-binding protein YrbF TERM 4584 3480472 - 3480495 + G 73 -8.8 -3.8211 | gap 1, opp_overlap 3480440 CTGGCGGAGCTGCCG CGCGAAGGCGG GCT CC-CCGTCGCG TTCTTATGGCTGGGC TERM 4585 3480711 - 3480673 - g 74 -7.4 -4.07568 | opp_overlap 3480672 3480671, overlap 3480681 GCCGGCGTGCGAAAA GGCGAAAATGATATTGCC GTT GGTAATCTCATTGGCGCC AATATTTTTAATCTC yrbG 3479971 - 3480948 + | putative calcium/sodium:proton antiporter yrbH 3480962 - 3481948 + | D-arabinose 5-phosphate isomerase yrbI 3481969 - 3482535 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase yrbK 3482532 - 3483107 + | hypothetical protein TERM 4586 3483511 - 3483497 - gf 73 -5.7 -4.37886 | TTACCGGCGACAAAA TCACC TACCT GGTGA AAGAGCAGAAAATGC TERM 4587 3483612 - 3483598 - gf 76 -3.4 -5.05037 | overlap 3483599 CAAGACAAAAACAAA GGCCAG ACT CCGGCG CAAAAGAAGAGTAAC yhbN 3483076 - 3483630 + | hypothetical protein yhbG 3483637 - 3484362 + | putative ABC transporter ATP-binding protein YhbG TERM 4588 3485414 - 3485404 - g 74 -3.2 -4.84017 | overlap 3485392 3485413 AATGGCTGATAAAAA GCCT TGA AAGC CGTAACGACACGCTG rpoN 3484410 - 3485843 + | RNA polymerase factor sigma-54 yhbH 3485866 - 3486153 + | putative sigma(54) modulation protein TERM 4589 3486181 - 3486207 + F 95 -13 -3.92522 | overlap 3486176 3486182 TTAGCCAGTGCAGGA CGGCCTGTTGTG TGA CACAACGGGCCA TTTGTACAGTTAGCG TERM 4590 3486182 - 3486206 + F 100 -16.5 -2.95192 | overlap 3486176 3486181 TAGCCAGTGCAGGAC GGCCTGTTGTG TGA CACAACGGGCC ATTTGTACAGTTAGC ptsN 3486271 - 3486762 + | sugar-specific enzyme IIA component of PTS yhbJ 3486808 - 3487662 + | hypothetical protein TERM 4591 3487713 - 3487694 - g 70 -9.2 -3.75105 | overlap 3487687 TGAAGTCACCAATAA GCTGGGCA TGCA TGCCCGGC CTGCCATGAAGCTTT ptsO 3487659 - 3487931 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) yrbL 3488180 - 3488812 + | hypothetical protein mtgA 3489615 - 3488887 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 4592 3488984 - 3488953 - G 89 -16.6 -2.59431 | opp_overlap 3488981, overlap 3488949 3488974 CTGGCGCATAATCCA CGCCTGCCGGCTAC GCAC ATAGCCGGAAGGCG CATTCGCCTTATAGC TERM 4593 3489534 - 3489497 - G 87 -8.3 -4.58663 | overlap 3489520 ATCACCGCCGAAAAA GGCACCGGAACCACGCT AAAC AGCGCAATGCCGCCGCC CCAAAAGACGGCGAG TERM 4594 3489592 - 3489606 + g 73 -9.2 -3.84246 | opp_overlap 3489587 GCGCAAAAACGTTAA CGGCGC GAT GCGTCG TTTGCTCATTCCGCC yhbL 3490265 - 3489612 - | isoprenoid biosynthesis protein TERM 4595 3490472 - 3490494 + r 100 -7.6 -5.77853 | overlap 3490473 3490475 TGGCGCAGTATTCGC GCACCCCGGT CAA ACCGGGGTCA TTTTTTTTCCGCGTT TERM 4596 3490473 - 3490493 + r 89 -11.1 -4.05085 | overlap 3490472 3490475 GGCGCAGTATTCGCG CACCCCGGT CAA ACCGGGGTC ATTTTTTTTCCGCGT TERM 4597 3490475 - 3490491 + r 93 -13.7 -3.60685 | overlap 3490473 3490472 CGCAGTATTCGCGCA CCCCGGT CAA ACCGGGG TCATTTTTTTTCCGC arcB 3492828 - 3490492 - | aerobic respiration control sensor protein ArcB TERM 4598 3491635 - 3491625 - G 70 -5.4 -4.44974 | TCAAATTCCATAAAA TCTG GCG CAGA CGCGTTCCGTCGGTA yhcC 3493851 - 3492922 - | putative FeS oxidoreductase TERM 4599 3495699 - 3495687 - g 80 -10.5 -3.86822 | GAAGTGGTCGAGAAA GGCCG CGT CGGCC CAGGCGAGCTGATGG TERM 4600 3496846 - 3496830 - g 74 -10.8 -3.55622 | CTGAATCTCTCCAAA CGCGCC TGGCT GGCGCG CAAACCCATTAGCCC TERM 4601 3497331 - 3497317 - g 71 -11.4 -2.90573 | overlap 3497316 TGATTCAGATTAAAG TCGCGC AGG GCGCGA AACCGGGCGAAGGCG TERM 4602 3498158 - 3498137 - g 76 -10.1 -3.8211 | CTGCACCGAGAATAA CCCGCCGTT TGAT AACGGCGTG CTGAATGCGCAACTG gltB 3494523 - 3498983 + | glutamate synthase subunit alpha TERM 4603 3499613 - 3499583 - g 74 -8.3 -3.9654 | gap 1, opp_overlap 3499610 CAAACTGGAAAAAGA GGTGATGA-CCCGC CGTC GCGAGATCTTCACC GGCATGGGTATTGAG gltD 3498993 - 3500411 + | glutamate synthase subunit beta TERM 4604 3500418 - 3500458 + F 73 -11 -2.52519 | gap 1, overlap 3500417 3500415 GAAGTGTAACCCTTC CGGCTCCCC-GCTTACTGC CTTG GCTGATGGCTGGGGAGCCG ATATTCCTCTCCTCA TERM 4605 3500953 - 3500919 - g 100 -14.4 -5.03314 | opp_overlap 3500902 3500921 3500925 3500941, overlap 3500920 3500921 3500923 TTTATTTTCAAAAAA TTGAGATTCTCCAGAC AGT GTCTGGAGAATCTCTC CATTTGGCGCAACTG TERM 4606 3500952 - 3500920 - g 100 -17.9 -3.61506 | opp_overlap 3500902 3500921 3500925 3500941, overlap 3500919 3500921 3500923 TTATTTTCAAAAAAT TGAGATTCTCCAGAC AGT GTCTGGAGAATCTCT CCATTTGGCGCAACT TERM 4607 3500951 - 3500921 - g 100 -21.4 -2.76422 | opp_overlap 3500902 3500921 3500925 3500941, overlap 3500920 3500919 3500923 TATTTTCAAAAAATT GAGATTCTCCAGAC AGT GTCTGGAGAATCTC TCCATTTGGCGCAAC TERM 4608 3500921 - 3500951 + G 100 -21.4 -2.64155 | opp_overlap 3500921 3500920 3500919 3500923, overlap 3500902 3500925 3500941 TATTTTCAAAAAATT GAGATTCTCCAGAC AGT GTCTGGAGAATCTC TCCATTTGGCGCAAC TERM 4609 3500949 - 3500923 - g 95 -18.2 -2.92111 | opp_overlap 3500902 3500921 3500925 3500941, overlap 3500921 3500920 3500919 TTTTCAAAAAATTGA GATTCTCCAGAC AGT GTCTGGAGAATC TCTCCATTTGGCGCA TERM 4610 3500925 - 3500947 + G 86 -15 -2.98088 | opp_overlap 3500923 3500921 3500920 3500919, overlap 3500921 3500941 TTCAAAAAATTGAGA TTCTCCAGAC AGT GTCTGGAGAA TCTCTCCATTTGGCG yhcG 3500618 - 3501721 + | putative cytoplasmic protein TERM 4611 3502519 - 3502529 + G 91 -6.8 -5.14563 | AGCGCCGTACTGATT GCGA TGG TCGC TTTTTTCCTCGGCAA codB 3501838 - 3503091 + | cytosine permease STM3334 3503078 - 3504358 + | cytosine deaminase yhcH 3504908 - 3504441 - | putative cytoplasmic protein TERM 4612 3504798 - 3504809 + g 71 -7.2 -3.96327 | opp_overlap 3504796 GCCCTGCAATTCATA GCGC CCCG GCGC TTTCTCCTGCGGCCT nanK 3505780 - 3504905 - | N-acetylmannosamine kinase nanE 3506466 - 3505777 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 4613 3506203 - 3506157 - G 91 -14.5 -3.14344 | gap 1, overlap 3506166 GAGCGGTTCCATCAA CGGCGATAATAGCTGCGCCGGC CTGC GCCAGCGCATCTAC-ATCGTCG AGAAAAGGGGTAATG TERM 4614 3506195 - 3506166 - G 95 -14.3 -3.33737 | overlap 3506157 CATCAACGGCGATAA TAGCTGCGCCGGC CTGC GCCAGCGCATCTA CATCGTCGAGAAAAG TERM 4615 3506509 - 3506483 - R 77 -9.4 -3.86346 | overlap 3506485 CTACTCCCTTACAAA TATTGCCCGGTT GAA AACCGGGCAAGC GGATTAACTTTTCGT TERM 4616 3506507 - 3506485 - R 100 -16.4 -3.52113 | overlap 3506483 ACTCCCTTACAAATA TTGCCCGGTT GAA AACCGGGCAA GCGGATTAACTTTTC nanT 3508003 - 3506513 - | putative sialic acid transporter TERM 4617 3506750 - 3506777 + g 70 -9.7 -3.35679 | CGCTCCCAGGATCGG CGCCAGCGCGC CGCCGA GCGCGCCGACG TTATAAGTAAAGCCC TERM 4618 3507180 - 3507154 - G 71 -11.6 -2.92386 | overlap 3507151 3507149 GGAAAGCAAACAGTA CCACCAGCATCA GCA TGACGCCAGTGG GCCAGCGTTTACCGC nanA 3509012 - 3508119 - | N-acetylneuraminate lyase TERM 4619 3509139 - 3509154 + r 79 -3.2 -5.32608 | overlap 3509133 AACCGGGATCGGAGG TGCGAT CGCT ACCGCA TTTTTTGACTTTTTT yhcK 3509938 - 3509147 - | transcriptional regulator NanR TERM 4620 3510021 - 3510046 + r 76 -7.5 -4.25256 | opp_overlap 3510025, overlap 3510025 GAGAGGAGACCAAAC AAAACAGGCCC TTCA GGGCCTGTTGA TTATTTTACTACACG TERM 4621 3510042 - 3510025 - R 100 -12.7 -4.97158 | opp_overlap 3510025 3510021 GGAGACCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA TERM 4622 3510025 - 3510042 + r 93 -12.7 -3.70405 | opp_overlap 3510025, overlap 3510021 GGAGACCAAACAAAA CAGGCCC TTCA GGGCCTG TTGATTATTTTACTA sspB 3510547 - 3510047 - | ClpXP protease specificity-enhancing factor sspA 3511191 - 3510553 - | stringent starvation protein A TERM 4623 3510785 - 3510766 - G 74 -10 -3.72576 | overlap 3510768 CGGTTTCTGACCAAA TACTGGCG CAAT CGCCAGCA GCTCTTCACGCAGTT TERM 4624 3510783 - 3510768 - G 73 -10.4 -3.44848 | overlap 3510766 GTTTCTGACCAAATA CTGGCG CAAT CGCCAG CAGCTCTTCACGCAG STM3343 3512206 - 3511454 - | putative cytoplasmic protein TERM 4625 3512354 - 3512367 + r 100 -9.5 -5.08824 | opp_overlap 3512354 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCTAACAG TERM 4626 3512367 - 3512354 - R 100 -9.5 -5.64274 | opp_overlap 3512354 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCTAACAG rpsI 3512798 - 3512406 - | 30S ribosomal protein S9 rplM 3513242 - 3512814 - | 50S ribosomal protein L13 yhcM 3514669 - 3513545 - | putative ATPase TERM 4627 3514455 - 3514481 + g 81 -6.6 -4.68994 | CACATATACAGCCCG CGAACCGG TATTTGCGCGT CCGGTTCG TTTTTGCCTAATAAT yhcB 3514856 - 3515260 + | cytochrome d ubiquinol oxidase subunit III TERM 4628 3515285 - 3515303 + F 79 -11.7 -3.13082 | opp_overlap 3515283, overlap 3515283 3515281 GTTAAGAAATTTATC GGGCGCA TCGCT TGCGCCC TCTCTCTATCTTTCC TERM 4629 3516641 - 3516615 - g 77 -3.5 -5.02476 | opp_overlap 3516616, overlap 3516616 3516618 ATAGCGTCGAAAAAA GCAGTCCTGCC GCGCA GGCCGGTTTGC AAAAAGATGATGTTA TERM 4630 3516661 - 3516647 - g 83 -7.2 -4.56597 | GCCGGTTTGCAAAAA GATGAT GTT ATCATC GGCGTTAATCGCGAT degQ 3515417 - 3516784 + | serine endoprotease degS 3516877 - 3517947 + | serine endoprotease TERM 4631 3517972 - 3517950 - T 100 -12 -4.4078 | opp_overlap 3517934 3517953 GGCGTCGAACTAAAA CGACGCGG CTTTTGC CCGCGTCG TTCGACGACTAGTCA STM3350 3518712 - 3517981 - | putative inner membrane protein TERM 4632 3518163 - 3518180 + g 70 -7 -4.07568 | GTTGCGCCTGTTGAC GCGCAT ACTGCG ATGCGC TTTTCCAGGCGACCA oadB 3520033 - 3518732 - | putative sodium ion pump oxaloacetate decarboxylase beta chain oadA 3521821 - 3520046 - | pyruvate carboxylase subunit B TERM 4633 3521574 - 3521598 + g 70 -7 -4.1196 | CCGAGCAGGTTCTGG CCGCGCAGCA ACATC TGCAGCGGGG TTTTGGGCATGGCTT oadG 3522091 - 3521837 - | oxaloacetate decarboxylase subunit gamma STM3354 3522864 - 3522247 - | L(+)-tartrate dehydratase subunit beta STM3355 3523763 - 3522864 - | tartrate dehydratase subunit alpha STM3356 3525064 - 3523796 - | putative cation transporter TERM 4634 3524521 - 3524532 + g 78 -5.8 -4.74706 | TGCCGCAGATGAGCA TCGG GAGA CCGA TTTTTGCGTATTCAA STM3357 3525940 - 3525275 - | putative regulatory protein STM3358 3526556 - 3525927 - | putative regulatory protein TERM 4635 3526457 - 3526475 + g 75 -5.9 -4.66537 | CCGCAATACTTTCCT GCGCGAG TTCTT CTCCCGC TTTTATATTGCCGGA TERM 4636 3526659 - 3526640 - R 95 -12.8 -3.98913 | overlap 3526652 TTTACAGTCAAAGAA GCCGGAGC AAAA GCCCCGGC ATCGGGCAGGAACAG mdh 3527614 - 3526676 - | malate dehydrogenase TERM 4637 3526844 - 3526830 - G 70 -5.6 -4.38927 | GGCTGAGAGAAGAAA CGGGCA TAC TGACCG TCGCCTTCCACATAG TERM 4638 3527182 - 3527192 + g 75 -4 -4.95155 | opp_overlap 3527166 CCAGCGTGGTAACGC CAAA CAG TTTG TTTTTGTCGTATACG argR 3528028 - 3528498 + | arginine repressor TERM 4639 3528503 - 3528533 + F 80 -6 -4.95155 | overlap 3528504 3528505 AAGAGCTTTAGTCCC ACTTCCTCCGTCGT CGT ACGGCGGAGGCACC TTTTTGTCCTCTCCC TERM 4640 3528504 - 3528532 + F 75 -9.5 -3.5637 | overlap 3528503 3528505 AGAGCTTTAGTCCCA CTTCCTCCGTCGT CGT ACGGCGGAGGCAC CTTTTTGTCCTCTCC TERM 4641 3528505 - 3528531 + F 81 -13 -2.73099 | overlap 3528504 3528503 GAGCTTTAGTCCCAC TTCCTCCGTCGT CGT ACGGCGGAGGCA CCTTTTTGTCCTCTC TERM 4642 3528737 - 3528727 - f 79 -2.6 -5.27923 | opp_overlap 3528727, overlap 3528732 TAACGTTATAAAAAA TAAA ATT TTTA ATGTTTTTAAAAAGC TERM 4643 3528750 - 3528732 - f 85 -3.3 -5.49579 | opp_overlap 3528727, overlap 3528727 TTATAAAAAATAAAA TTTTTAA TGTTT TTAAAAA GCAGAAACAATTAGC yhcN 3528863 - 3529126 + | putative outer membrane protein STM3362 3529230 - 3529496 + | putative periplasmic protein TERM 4644 3529523 - 3529541 + T 100 -13.1 -5.47914 | CTAACCCGACGACTT GCCCCCG CCTGC CGGGGGC TTTTTTATGCTTTTT yhcO 3529828 - 3529556 - | putative cytoplasmic protein TERM 4645 3529772 - 3529785 + g 74 -6.7 -4.3623 | opp_overlap 3529784 CGTCTGCGTAAACTC GCGAT AAAA ATCGC TTTGGTTTTTAATAT TERM 4646 3529848 - 3529861 + r 72 -6.7 -4.30576 | overlap 3529846 AGCCACCATCCCCGA CAGAC AATT GTCTG TTTTACTACTAAGCA TERM 4647 3529918 - 3529935 + r 74 -3.3 -5.03994 | AAACGCTTTTAGCCC CGGAGCA CTCT TGCGCTG TTTTTGTATCTCAAA TERM 4648 3529989 - 3529971 - R 100 -8.1 -5.65177 | opp_overlap 3529971 ATAGTCATAAAAAAA CCGACGC TTTTG GCATCGG TTCTTGTGGGTTAGC yhcP 3531967 - 3530000 - | p-hydroxybenzoic acid efflux subunit AaeB yhcQ 3532905 - 3531973 - | p-hydroxybenzoic acid efflux subunit AaeA TERM 4649 3532552 - 3532593 + g 72 -3.5 -4.72272 | gap 1, overlap 3532553 3532580 CTCTTCCCGGGACAT CGCCTGTACGCCGAGGCG ATTACGG CGAC-CGGCTTCCTGGCG TTTTTCCTGCGCCAG TERM 4650 3532793 - 3532781 - G 86 -10.5 -4.08394 | ACATCGGCGCTAAAA CGCGC GTC GCGCG TCCAGGGAGATTCGG yhcR 3533116 - 3532913 - | hypothetical protein yhcS 3533298 - 3534227 + | putative DNA-binding transcriptional regulator tldD 3535795 - 3534350 - | protease TldD TERM 4651 3535174 - 3535207 + g 70 -8.7 -3.69332 | gap 1, opp_overlap 3535175, overlap 3535175 AATACTCATAACCAA AGCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGCG TTTACCGTCTTCTTC TERM 4652 3535206 - 3535175 - G 90 -12.2 -4.0127 | gap 1, opp_overlap 3535175 3535174 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4653 3535175 - 3535206 + g 72 -12.2 -2.80876 | gap 1, opp_overlap 3535175, overlap 3535174 ATACTCATAACCAAA GCGACCGCCGCCGCC GCT GGCGCCG-CGCTCGC GTTTACCGTCTTCTT TERM 4654 3535451 - 3535467 + g 74 -4.4 -4.75776 | gap 1 GTAGAGCGGCTGATG CGCTACG GCGG CG-AGCG TTTTTACCTTGCCTT yhdP 3539740 - 3535940 - | hypothetical protein cafA 3541316 - 3539847 - | ribonuclease G TERM 4655 3540059 - 3540070 + g 75 -5.8 -4.62069 | opp_overlap 3540057 3540059 TGATCTCATAGCAGA CGGT TTCC ACCG TTTTTACCGTCCCGC TERM 4656 3540673 - 3540652 - G 71 -10.1 -3.55444 | TGCGCATCGGCGAAA TCGCGCAGC ACGC GCTGCGCCA GCGCCAGTTCGCCAT TERM 4657 3540701 - 3540714 + g 71 -4.5 -4.63184 | overlap 3540709 CATACATCTGGTAGC GCGTT TGCG GACGC TTTTTGCGCTCCATT maf 3541899 - 3541306 - | Maf-like protein TERM 4658 3541640 - 3541654 + g 70 -7 -4.08216 | overlap 3541641 ATTTCTGCGGCATGA GCGGCG TCG CGCGGC TTTTCCAGCACCTCG mreD 3542399 - 3541908 - | rod shape-determining protein MreD mreC 3543451 - 3542399 - | cell wall structural complex MreBCD transmembrane component MreC TERM 4659 3543128 - 3543157 + g 71 -7.7 -3.96148 | overlap 3543136 ACGCAGCGGCGACCC CAGCAGCTCGCGC AACC GCGCGTTCTCCTG TTTGTACTGCCCCAG TERM 4660 3543136 - 3543149 + g 71 -9.5 -3.59024 | overlap 3543128 GCGACCCCAGCAGCT CGCGC AACC GCGCG TTCTCCTGTTTGTAC TERM 4661 3543176 - 3543188 + g 80 -4.8 -5.03715 | overlap 3543186 GTACTGCCCCAGCAT CAGC AGGTC GCTG TTTTTTAGCAGTAAT mreB 3544559 - 3543516 - | rod shape-determining protein STM3374.1n 3544667 - 3544858 + | hypothetical protein yhdA 3546807 - 3544867 - | regulatory protein CsrD TERM 4662 3545033 - 3545010 - G 74 -10.2 -3.53012 | CGCCTGTCGCGTAAA CCTGCGTAGG CGTG CCCGCGCAGG CCTCTACCAGACTTT TERM 4663 3545052 - 3545062 + g 74 -6.8 -4.29845 | CTACCAGACTTTGAA CCAG AAG CTGG TTTTCCGTTCGCTTC TERM 4664 3547381 - 3547393 + G 70 -6.9 -4.08945 | overlap 3547382 3547388 GTAACGCCATGATCA TCGGC ACC GCCGG TTTTACCGCCATGCT yhdH 3547011 - 3547985 + | putative oxidoreductase TERM 4665 3548137 - 3548147 + G 87 -2.4 -5.60993 | GAAGCCGATGTGACT GCGG AAT CGGC TTTTTTTATGCAGCG TERM 4666 3548399 - 3548389 - g 71 -8.2 -3.85698 | overlap 3548390 TTTGGCCTTGATAAA GCCG ACC CGGC GGCCAATGCCGGAAG STM3377 3548098 - 3549102 + | putative sulfite oxidase subunit YedY STM3378 3549103 - 3549702 + | putative sulfite oxidase subunit YedZ accB 3550095 - 3550565 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 4667 3550931 - 3550894 - g 74 -10.6 -3.53811 | gap 1 TTTATCGGCCCGAAA GCGGACACCAT-CCGCC TGATG GGCGATAAAGTGTCCGC GATTACCGCGATGAA TERM 4668 3550987 - 3550951 - g 85 -4.4 -5.14965 | overlap 3550952 ACCGCGATGAAAAAA GCGGGC-GTGCCGACCGT ACC AGGATCTG-ACGGCCCGC TGGGCGACGATATGA TERM 4669 3551076 - 3551053 - g 73 -9.4 -3.78775 | opp_overlap 3551074 CCGGTGATCATCAAA GCGTCCGGCG GCGG CGGCGGCCGC GGTATGCGCGTAGTT accC 3550576 - 3551925 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 4670 3551945 - 3551961 + F 100 -10.8 -5.72622 | opp_overlap 3551945 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG TERM 4671 3551961 - 3551945 - f 87 -10.8 -4.19506 | opp_overlap 3551945 ACGTTAATCTCAAAA GGCCGG TGAAT CCGGCC TTTTTTATTTCTGGG yhdT 3552034 - 3552276 + | hypothetical protein TERM 4672 3553089 - 3553109 + G 73 -6.1 -4.4261 | ACCGGGGCATTATTA TCGGTACGA TTG TCGTGGCGA TTTTAATGTTCGGGA panF 3552266 - 3553717 + | sodium/panthothenate symporter TERM 4673 3553791 - 3553821 + G 77 -11.2 -3.57144 | opp_overlap 3553801, overlap 3553796 AGAGCTGAGTGATGC GCTGATGGAAGCGG GCG CCGTTTCCATTACC TTTCAGGATACGCAC TERM 4674 3553796 - 3553816 + G 78 -11.9 -3.28001 | opp_overlap 3553801, overlap 3553791 TGAGTGATGCGCTGA TGGAAGCGG GCG CCGTTTCCA TTACCTTTCAGGATA prmA 3553729 - 3554610 + | ribosomal protein L11 methyltransferase TERM 4675 3554620 - 3554639 + F 91 -11.4 -4.36914 | AAATAATTCTTGTCA GCGTGGTC GCCC GGCCACGC TTTTCTCCACACAAC TERM 4676 3554914 - 3554901 - f 84 -8.1 -4.70583 | TTCATGAACACAAAA GCGCA TCTG TGCGC CCCCTTCCGACTGGC TERM 4677 3554956 - 3554942 - f 80 -5.6 -4.91712 | GGCAATGGAGAAAAA TCACGC GCA GCGGGA AGTGATCTTGTCCTG TERM 4678 3555034 - 3555021 - f 86 -4.5 -5.626 | opp_overlap 3554997 3555021, overlap 3555008 TAGCTTATAAAAAAA GCAGA TTAT TCCGC TTATCTTGTTTCTGG TERM 4679 3555236 - 3555222 - f 76 -4.2 -5.00884 | overlap 3555223 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG TERM 4680 3556141 - 3556116 - g 70 -9.8 -3.34894 | gap 1, overlap 3556114 AATCGCGCGTAAACA CGT-CTCCTGG TATCT CCAGGAGCACG CTCCAGACGACCAGT yhdG 3555271 - 3556236 + | tRNA-dihydrouridine synthase B fis 3556262 - 3556558 + | DNA-binding protein Fis TERM 4681 3556588 - 3556613 + F 100 -8.2 -5.252 | opp_overlap 3556588 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATC TERM 4682 3556613 - 3556588 - f 74 -6 -4.56597 | opp_overlap 3556588 CTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGCATC TERM 4683 3556812 - 3556822 + G 75 -6.8 -4.40358 | ATGGTGGAGTCCTGG GACG AAG CGTC TTTTCTGGCCTGGCT yhdJ 3556644 - 3557528 + | putative methyltransferase yhdU 3557611 - 3557775 + | putative periplasmic protein TERM 4684 3559372 - 3559405 + G 84 -12.5 -3.43492 | GGCGTACTGAATCCT GACCAGTTTTTACCG CTGG CGGAAAAAACGGGTC TTATCGTCACTATCG STM3388 3557926 - 3560025 + | putative signal transduction protein envR 3560690 - 3560028 - | DNA-binding transcriptional regulator EnvR TERM 4685 3561350 - 3561340 - g 73 -5.4 -4.64861 | CGTGCTTAAAAGAAA CTTC ACC GAAG GTAGCGATGTAGAGG acrE 3561104 - 3562261 + | acriflavine resistance protein E precursor TERM 4686 3563212 - 3563242 + G 70 -6.8 -4.1021 | overlap 3563202 3563215 AAACTGGCGGAGCTG CAGCCTTTCTTCCC TCA GGGAATGAAGGTGG TTTATCCTTATGACA acrF 3562273 - 3565386 + | multidrug transport protein TERM 4687 3565399 - 3565414 + F 93 -10.4 -4.58395 | opp_overlap 3565397 3565395 3565399 TAACCGGTAAACAGA GGCGTC TTCG GACGCC TTTTTAAACGGTACG TERM 4688 3565414 - 3565399 - f 74 -10.4 -3.25918 | opp_overlap 3565399, overlap 3565397 3565395 TAACCGGTAAACAGA GGCGTC TTCG GACGCC TTTTTAAACGGTACG yhdV 3565622 - 3565843 + | putative outer membrane lipoprotein TERM 4689 3565874 - 3565848 - f 80 -12.2 -3.05769 | opp_overlap 3565853, overlap 3565841 TTTCTAAATGATACA TGCAGGCGCGGC AAT GCCGCGCTTTCA GTAATAATATAAAGG TERM 4690 3565853 - 3565869 + F 100 -15.1 -3.6959 | opp_overlap 3565848 3565841 AAATGATACATGCAG GCGCGGC AAT GCCGCGC TTTCAGTAATAATAT TERM 4691 3566201 - 3566187 - f 71 -3.5 -4.88405 | AACTGGCAAATAAAA TAGCC TAATG GGCCA GATTTTTAGTCCTCA TERM 4692 3566414 - 3566448 + F 90 -10.1 -4.55209 | gap 1, opp_overlap 3566414 3566421, overlap 3566421 CATAGAGAGATAAAT GCAAAAAGGCCCAGTC TTTC GATTGGGCCC-TTTGC TTTATTTGATGTCTG TERM 4693 3566448 - 3566414 - f 70 -10.1 -3.10967 | gap 1, opp_overlap 3566414 3566421, overlap 3566421 CATAGAGAGATAAAT GCAAAAAGGCCCAGTC TTTC GATTGGGCC-CTTTGC TTTATTTGATGTCTG TERM 4694 3566442 - 3566421 - f 100 -10.1 -4.85433 | opp_overlap 3566414 3566421, overlap 3566414 AGATAAATGCAAAAA GGCCCAGTC TTTC GATTGGGCC CTTTGCTTTATTTGA TERM 4695 3566421 - 3566442 + F 81 -12.3 -3.15242 | opp_overlap 3566421 3566414, overlap 3566414 AGATAAATGCAAAAA GGCCCAGTC TTTC GATTGGGCC CTTTGCTTTATTTGA TERM 4696 3566524 - 3566538 + F 71 -7.8 -3.99324 | opp_overlap 3566524 TGCGCAACGTTCAAA TCCGCT CCC GGCGGA TTTGTCCTCCTCAGG TERM 4697 3566624 - 3566575 - f 100 -23.3 -4.09117 | opp_overlap 3566579 3566584 3566589, overlap 3566584 3566589 CTCACCGACAAACAA CAGATAAAACAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGTTTTATTTG ATGTCTGGCAGTTCC TERM 4698 3566579 - 3566620 + F 100 -20.5 -3.88498 | opp_overlap 3566575 3566584 3566589, overlap 3566584 3566589 CCGACAAACAACAGA TAAAACAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGTTTTA TTTGATGTCTGGCAG TERM 4699 3566615 - 3566584 - f 100 -18.2 -4.74989 | opp_overlap 3566579 3566584 3566589, overlap 3566575 3566589 AAACAACAGATAAAA CAAAAGGCCCAGTC TTTC GACTGAGCCTTTTG TTTTATTTGATGTCT TERM 4700 3566584 - 3566615 + F 100 -16 -4.98061 | opp_overlap 3566584 3566575 3566589, overlap 3566579 3566589 AAACAACAGATAAAA CAAAAGGCCCAGTC TTTC GACTGAGCCTTTTG TTTTATTTGATGTCT TERM 4701 3566610 - 3566589 - f 100 -12.3 -5.24647 | opp_overlap 3566584 3566579 3566589, overlap 3566584 3566575 ACAGATAAAACAAAA GGCCCAGTC TTTC GACTGAGCC TTTTGTTTTATTTGA TERM 4702 3566589 - 3566610 + F 100 -10.1 -5.34857 | opp_overlap 3566589 3566584 3566575, overlap 3566584 3566579 ACAGATAAAACAAAA GGCCCAGTC TTTC GACTGAGCC TTTTGTTTTATTTGA TERM 4703 3569577 - 3569589 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4704 3570131 - 3570155 + F 71 -8 -3.93061 | gap 1, opp_overlap 3570129 3570137, overlap 3570133 3570134 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCTGTG TTTCAATTTTCAGCT TERM 4705 3570230 - 3570195 - f 77 -9.2 -4.00532 | opp_overlap 3570197 3570206 TTTTTAAAGAGCAAA TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA TTAAGGCAGGTGACT TERM 4706 3572188 - 3572200 + F 71 -7.7 -4.00532 | overlap 3572176 CACCGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4707 3572220 - 3572234 + F 76 -4.2 -5.0916 | opp_overlap 3572220, overlap 3572209 3572221 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTCTCTTCAACC yrdA 3572482 - 3573036 + | putative ferripyochelin-binding protein yrdB 3573269 - 3573012 - | putative periplasmic protein aroE 3574084 - 3573266 - | shikimate 5-dehydrogenase yrdC 3574661 - 3574089 - | putative ribosome maturation factor yrdD 3575208 - 3574666 - | putative DNA topoisomerase TERM 4708 3574716 - 3574730 + g 76 -3.4 -5.10933 | opp_overlap 3574711, overlap 3574717 TGGCGCAAAAGCGCT TCACGC CCT GCGCGG TTTTCTTTTCGATGA TERM 4709 3575147 - 3575173 + g 71 -4.2 -4.56597 | overlap 3575150 3575162 GAACGAATTACCAGT TCGGCCCCGCAC TGC GGGCAGGGCTCA TTTTTACGCACCGAA smg 3575708 - 3575235 - | hypothetical protein smf 3576804 - 3575680 - | hypothetical protein def 3576936 - 3577445 + | peptide deformylase TERM 4710 3577507 - 3577529 + G 95 -14.9 -3.23452 | overlap 3577502 GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTAACTTCTGGACAT TERM 4711 3577692 - 3577682 - g 74 -6.8 -4.25104 | TCGTCCTCAGGAAAA CCAG CAT CTGG TGGCTGACTTACATG fmt 3577461 - 3578408 + | methionyl-tRNA formyltransferase TERM 4712 3578425 - 3578443 + F 100 -10.2 -5.54907 | opp_overlap 3578426, overlap 3578426 GGTCACGTCTTTATA AGCCCGGT GTT ACCGGGCA TTTTTATTTTATACA TERM 4713 3578426 - 3578442 + F 100 -13.7 -3.91317 | opp_overlap 3578426, overlap 3578425 GTCACGTCTTTATAA GCCCGGT GTT ACCGGGC ATTTTTATTTTATAC TERM 4714 3578442 - 3578426 - f 86 -13.7 -3.29511 | opp_overlap 3578426 3578425 GTCACGTCTTTATAA GCCCGGT GTT ACCGGGC ATTTTTATTTTATAC TERM 4715 3579160 - 3579177 + G 80 -5.5 -4.88736 | CTGTCCAGGATGCCT CTGCGCA GGGA TGTGCGG TTTTTCTCGCTCCTC sun 3578460 - 3579749 + | 16S rRNA methyltransferase B trkA 3579771 - 3581147 + | potassium transporter peripheral membrane component TERM 4716 3581154 - 3581172 + TF 100 -11.7 -4.90917 | opp_overlap 3581153 TTCCTCTAATTTAAG GGGCGCT CATTC AGCGCCC TTTTTAATTCCCTTT TERM 4717 3581641 - 3581607 - gT 74 -2.1 -5.09426 | gap 1, opp_overlap 3581613 3581618 3581635, overlap 3581613 3581615 CTCAACCGTAAAAAA GCAGAAGA-GCCGGCA GCTC CGCCAGCGCCTTCTAA AGAGGAAGTGTTATT STM3411 3581907 - 3581638 - | putative cytoplasmic protein mscL 3581289 - 3581702 + | large-conductance mechanosensitive channel TERM 4718 3581758 - 3581706 - GT 100 -17.9 -3.61894 | opp_overlap 3581707, overlap 3581709 3581712 AACCGTTCTTAATAA GCAGAAGGCCAGTGGTAAAAAAGTG ATT CACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG TERM 4719 3581707 - 3581758 + gT 91 -14.6 -3.09933 | gap 1, opp_overlap 3581706 3581709 3581712 ACCGTTCTTAATAAG CAG-AAGGCCAGTGGTAAAAAAGTG ATT CACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG TERM 4720 3581755 - 3581709 - GT 100 -24 -2.93073 | opp_overlap 3581707, overlap 3581706 3581712 CGTTCTTAATAAGCA GAAGGCCAGTGGTAAAAAAGTG ATT CACTTTCTTGCCACTGGCCTCC CAGTTCCCTCGATTA TERM 4721 3581752 - 3581712 - GT 100 -22.1 -3.61089 | opp_overlap 3581707, overlap 3581709 3581706 TCTTAATAAGCAGAA GGCCAGTGGTAAAAAAGTG ATT CACTTTCTTGCCACTGGCC TCCCAGTTCCCTCGA zntR 3582390 - 3581965 - | zinc-responsive transcriptional regulator yhdN 3582769 - 3582401 - | hypothetical protein TERM 4722 3582833 - 3582866 + r 79 -11.9 -3.16921 | opp_overlap 3582843, overlap 3582843 TGGGGTTCAGGAGGG TATAAAAAAACCCGC CGAA GCGGGTTTTTTTACG TTACTACAGATTACT TERM 4723 3582856 - 3582843 - R 100 -9.5 -5.626 | opp_overlap 3582833 3582843 GAGGGTATAAAAAAA CCCGC CGAA GCGGG TTTTTTTACGTTACT TERM 4724 3582843 - 3582856 + r 100 -9.5 -5.54192 | opp_overlap 3582843, overlap 3582833 GAGGGTATAAAAAAA CCCGC CGAA GCGGG TTTTTTTACGTTACT rplQ 3583260 - 3582877 - | 50S ribosomal protein L17 rpoA 3584290 - 3583301 - | DNA-directed RNA polymerase subunit alpha TERM 4725 3583384 - 3583396 + g 76 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC GGTAA GAGA TTTTTTACCCAAGTT TERM 4726 3584331 - 3584313 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3584936 - 3584316 - | 30S ribosomal protein S4 TERM 4727 3584426 - 3584436 + g 70 -6.8 -4.12188 | overlap 3584423 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 4728 3584963 - 3584981 + r 76 -4.4 -5.00616 | opp_overlap 3584963 3584967 AACTAACCTGGAAAA CGAAGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3585359 - 3584970 - | 30S ribosomal protein S11 rpsM 3585732 - 3585376 - | 30S ribosomal protein S13 TERM 4729 3585557 - 3585575 + g 85 -8.8 -4.44667 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTTCTTCAGACA TERM 4730 3585849 - 3585820 - R 100 -12.3 -4.6645 | gap 1 TACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA rpmJ 3585995 - 3585879 - | 50S ribosomal protein L36 secY 3587358 - 3586027 - | preprotein translocase subunit SecY TERM 4731 3586925 - 3586894 - G 80 -10.2 -3.81755 | overlap 3586900 AGCGGTGAAATAGAA TGCAAAGCCTGG ATTCATCA CCAGGCCCTGCA TACCAGGCATATTCG rplO 3587800 - 3587366 - | 50S ribosomal protein L15 TERM 4732 3587746 - 3587759 + g 73 -5.2 -4.59853 | opp_overlap 3587739, overlap 3587739 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3587983 - 3587804 - | 50S ribosomal protein L30 rpsE 3588490 - 3587987 - | 30S ribosomal protein S5 rplR 3588858 - 3588505 - | 50S ribosomal protein L18 rplF 3589401 - 3588868 - | 50S ribosomal protein L6 rpsH 3589806 - 3589414 - | 30S ribosomal protein S8 rpsN 3590130 - 3589840 - | 30S ribosomal subunit protein S14 rplE 3590699 - 3590160 - | 50S ribosomal protein L5 TERM 4733 3590537 - 3590555 + g 71 -6 -4.30987 | TTGCTGTCAGGTCTG CTGCTG CGTTATC CAGCAG TTTCTTGTCAGCGAT rplX 3591028 - 3590714 - | 50S ribosomal protein L24 rplN 3591410 - 3591039 - | 50S ribosomal protein L14 TERM 4734 3591482 - 3591470 - R 81 -3.3 -5.40474 | AGGTCGTTAAAAAAA CCCCA TAT CGAGG GCGCGGCATTATAAC TERM 4735 3591551 - 3591526 - R 100 -12.7 -5.252 | opp_overlap 3591526 3591530 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGCG TERM 4736 3591526 - 3591551 + r 77 -10.5 -3.34895 | opp_overlap 3591526, overlap 3591530 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGCG TERM 4737 3591530 - 3591547 + r 74 -6.9 -4.3255 | opp_overlap 3591526, overlap 3591526 GGTAGAAAAAATAAA CGGCCCA TCGC TGAGCCG TTTATTCGTTGAGAA rpsQ 3591828 - 3591574 - | 30S ribosomal protein S17 rpmC 3592019 - 3591828 - | 50S ribosomal protein L29 rplP 3592429 - 3592019 - | 50S ribosomal protein L16 rpsC 3593143 - 3592442 - | 30S ribosomal protein S3 TERM 4738 3592471 - 3592486 + g 70 -3.2 -4.70626 | overlap 3592472 3592483 TACGCTGCTGCTTTT TCGGTT GAGC AGCCGG TTTTTCCGGTTGTTC rplV 3593493 - 3593161 - | 50S ribosomal protein L22 rpsS 3593786 - 3593508 - | 30S ribosomal protein S19 rplB 3594624 - 3593803 - | 50S ribosomal protein L2 TERM 4739 3594660 - 3594680 + r 75 -9.7 -3.57462 | opp_overlap 3594663, overlap 3594663 CTCAGCGCCGCCGAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3594944 - 3594642 - | 50S ribosomal protein L23 rplD 3595546 - 3594941 - | 50S ribosomal protein L4 TERM 4740 3595514 - 3595526 + g 73 -10.5 -3.42663 | opp_overlap 3595509, overlap 3595513 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3596186 - 3595557 - | 50S ribosomal protein L3 TERM 4741 3596148 - 3596162 + g 82 -5.6 -5.02074 | opp_overlap 3596129 3596147, overlap 3596150 ATCTTCAGTGAAGAT GCGGGT CAT ACCCAC TTTTTTACCGACTAA rpsJ 3596530 - 3596219 - | 30S ribosomal protein S10 TERM 4742 3596797 - 3596812 + H 73 -4 -4.86731 | gap 1 AGATGGTACGCATGG GATGGCG ACG CGC-ATC TTTTCTTTGGAAGGC TERM 4743 3596983 - 3597002 + G 76 -9.2 -4.01939 | TATACGACGCGCGTA CCGGTCTG CTGC CTGACCGG TTTACTTGTCCATTG hopD 3596910 - 3597377 + | leader peptidase HopD bfr 3597850 - 3597374 - | bacterioferritin, iron storage and detoxification protein TERM 4744 3597924 - 3597914 - R 89 -5.4 -5.78622 | GGATGTCAAAAAAAA GAGT GTG ACTC AGGCGATCTCTTTAA bfd 3598117 - 3597923 - | bacterioferritin-associated ferredoxin TERM 4745 3598272 - 3598257 - R 100 -11.8 -5.11063 | opp_overlap 3598255 3598257 AGCAGGCAACAAAAA GGGCGC CGAA GCGCCC TCTTCAATTCAAAAC TERM 4746 3598257 - 3598272 + r 79 -11.8 -3.14878 | opp_overlap 3598257, overlap 3598255 AGCAGGCAACAAAAA GGGCGC CGAA GCGCCC TCTTCAATTCAAAAC tuf 3599486 - 3598302 - | elongation factor Tu TERM 4747 3599531 - 3599506 - R 82 -13.3 -2.78935 | opp_overlap 3599504 ATATTCCTTACTATA GCGCTCTCCCC TTCA GGAGAGAGCAC GGGATTTTGGTTTTT fusA 3601672 - 3599558 - | elongation factor G TERM 4748 3601743 - 3601720 - R 83 -8.9 -4.21275 | gap 1 TTAAGTTATCCAAAA CGGGCGACTT ACCTG AAG-CGCCCG CCTGGTGACTATGAC rpsG 3602239 - 3601769 - | 30S ribosomal protein S7 rpsL 3602709 - 3602335 - | 30S ribosomal protein S12 TERM 4749 3602779 - 3602757 - R 93 -10.6 -4.7268 | AAACACGTAATAAAA CGCCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG yheL 3603122 - 3602835 - | tRNA 2-thiouridine synthesizing protein B yheM 3603486 - 3603130 - | hypothetical protein TERM 4750 3603315 - 3603330 + g 75 -4 -4.84359 | gap 1 CAATATAGTCACGCG CCAGTAC AGC GT-CTGG TTTTTGTCCGGGTAA TERM 4751 3603406 - 3603376 - G 100 -9.8 -5.24129 | gap 1, opp_overlap 3603377 GTCGCTGATAAAAAA GACGCCCAGCGCT TCCGTT AGCGCT-GACGTC GCCAGCAGCGCATCC yheN 3603872 - 3603486 - | hypothetical protein yheO 3604594 - 3603872 - | putative regulatory protein TERM 4752 3604389 - 3604420 + g 70 -6.7 -4.21194 | gap 1 ATTTTACGGCCCGTA TGTTC-GCCATTGG CAATA CGAATGGCTGAACA TTTTAGATCCTGCAA TERM 4753 3604619 - 3604606 - R 78 -6.7 -4.59226 | opp_overlap 3604616 3604617 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTATGTTT TERM 4754 3604860 - 3604839 - R 100 -13 -6.09888 | opp_overlap 3604836 CCTGAATAAAAAAAA CCGCCGCT ATTACA AGCGGCGG CTCTCAGTTTTTATT fkpA 3605689 - 3604871 - | FKBP-type peptidyl-prolyl cis-trans isomerase slyX 3605909 - 3606127 + | hypothetical protein TERM 4755 3606153 - 3606139 - T 100 -8.5 -5.58454 | opp_overlap 3606139 TTGAGACGAAAAAAA GCGGG GTTAA CCCGC TTTTTTTGTGCCCGA TERM 4756 3606139 - 3606153 + T 100 -8.5 -5.60993 | opp_overlap 3606139 TTGAGACGAAAAAAA GCGGG GTTAA CCCGC TTTTTTTGTGCCCGA TERM 4757 3606237 - 3606268 + T 79 -10.8 -3.54424 | opp_overlap 3606236 GCAAGCTTGAAAATT CCCCGGGAGCATAG ATAA CTATGTGACCGGGG TTTGAAAGCGTAGCC slyD 3606905 - 3606315 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4758 3606879 - 3606890 + g 73 -5.8 -4.39989 | overlap 3606863 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT yheV 3607200 - 3607000 - | putative cytoplasmic protein kefB 3609016 - 3607211 - | glutathione-regulated potassium-efflux system protein KefB TERM 4759 3607799 - 3607788 - G 77 -7.2 -4.2717 | ATCACCTGACCAAAA CGGC CAAA GCCG ACGACAATCACCTGG yheR 3609567 - 3609016 - | glutathione-regulated potassium-efflux system ancillary protein KefG TERM 4760 3611360 - 3611344 - g 80 -5.1 -4.91109 | overlap 3611345 GGTTCACGACAAAAA GGTCGAA CCG TTCGACG GAGACCTGGAAGATT yheS 3609833 - 3611740 + | putative ABC transporter ATP-binding protein TERM 4761 3612127 - 3612147 + T 78 -6.1 -4.72007 | overlap 3612130 CTGCGTTATGTGATT TAGCGGCAA AGG TTGCCGTGA TTTATTTTCGTCAGC TERM 4762 3612130 - 3612144 + T 71 -10 -3.27205 | overlap 3612127 CGTTATGTGATTTAG CGGCAA AGG TTGCCG TGATTTATTTTCGTC STM3461 3612437 - 3612126 - | hypothetical protein TERM 4763 3612283 - 3612294 + g 83 -5.8 -4.95896 | AACAAGTAAATACCG CCAG CTTG CTGG TTTTTCTCGCTTTCT yheT 3612635 - 3613702 + | putative hydrolase TERM 4764 3613836 - 3613812 - g 76 -2.7 -5.06414 | overlap 3613814 3613827 TCGCTTGAACAAAAA GTCGCTGACGT AAA ACGCCAACTGC AATCCGGCGAGGCCG yheU 3613710 - 3613916 + | hypothetical protein prkB 3613968 - 3614837 + | putative phosphoribulokinase yhfA 3615337 - 3614933 - | hypothetical protein TERM 4765 3615410 - 3615393 - H 73 -4.1 -4.84311 | GCGCATACAACAAAA GTCGC AATGGAAG GCGAC CTGGGTCATGCTGAA crp 3615645 - 3616277 + | cAMP-regulatory protein TERM 4766 3616289 - 3616310 + F 95 -8 -5.30616 | opp_overlap 3616289, overlap 3616281 TTAATTCCGTCAGAA TGGCGCGT TTTATC ATGCGCCA TTTTTGTTTGCATCG TERM 4767 3617114 - 3617172 + G 88 -11.6 -4.12254 | opp_overlap 3617114 3617137, overlap 3617115 3617155 CAGCCATGCGGAAGA GGTGATTCGCTGGAATGCGCAAACGGTC GCC GCCCGTCTGCGCGTGCTGGCGGATGACA TTCTTTATCATCGTC TERM 4768 3617115 - 3617171 + G 91 -15.1 -3.0663 | opp_overlap 3617114 3617137, overlap 3617114 3617155 AGCCATGCGGAAGAG GTGATTCGCTGGAATGCGCAAACGGTC GCC GCCCGTCTGCGCGTGCTGGCGGATGAC ATTCTTTATCATCGT TERM 4769 3617246 - 3617214 - g 95 -10.6 -4.65895 | overlap 3617216 TTCTCCATGGAAAAA CAGATTGGCGCTCT GGAGA AGATCGCCAATCAG CATCCTGAAAATCCG TERM 4770 3617244 - 3617216 - g 90 -11.8 -3.94812 | overlap 3617214 CTCCATGGAAAAACA GATTGGCGCTCT GGAGA AGATCGCCAATC AGCATCCTGAAAATC yhfK 3616326 - 3618413 + | putative inner membrane protein argD 3619673 - 3618456 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein pabA 3620322 - 3619759 - | para-aminobenzoate synthase component II TERM 4771 3620087 - 3620060 - G 75 -12 -2.85699 | overlap 3620059 ACCGACGCACCAAAG GCCTGCGCCATC GCCT GATGACCCAGGC AAACGCCCAGCATCG TERM 4772 3620135 - 3620120 - G 71 -10.4 -3.29263 | overlap 3620108 ATACGTCCGGCATAA TGGCGG ATGA CCGCCA GTGAAATGCCAGCGT TERM 4773 3620236 - 3620201 - G 71 -9.9 -3.53012 | opp_overlap 3620210 TTTTGCGGGTTCAAA GCGTCAATG-TGCGCCA GCGT TAGCGCATCATTG-CGC CGGACCTGCACTTCC fic 3620956 - 3620354 - | cell filamentation protein Fic TERM 4774 3620414 - 3620395 - G 71 -4.2 -4.56597 | gap 1, opp_overlap 3620406, overlap 3620406 TCGCTTTCTGAAAAA TCGC-CCGC AAA GCGGAGAGA TCGCCCATCGCGCCG TERM 4775 3620653 - 3620665 + g 70 -3.3 -4.70659 | CCAGATCCTGCATCA GAGCG TTG CCCTC TTTTTCGATATAGGC yhfG 3621113 - 3620946 - | hypothetical protein TERM 4776 3621060 - 3621087 + g 74 -2.6 -5.0065 | overlap 3621076 TTGCTGGAAGTTAAC GTTGCGCCGTTG CTCC CAAAAGCGTGAC TTTTGTTTATCGGTA TERM 4777 3621211 - 3621191 - R 100 -11.8 -4.46155 | GAGACAGGGAGAAAA CGCGGGCG GCTCG CACCCGCG CAGGCATGTTTTATG ppiA 3621794 - 3621222 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 4778 3621775 - 3621761 - G 77 -7.8 -4.33907 | opp_overlap 3621774 CAGAAAGAGCGAAAA CAGCTG CGA CAGCCG CCAGAGTCGATTTGA TERM 4779 3622321 - 3622361 + G 71 -8.2 -3.78934 | gap 1, overlap 3622322 3622360 GTTTTATCCTGATGG TGCT-GGCGGTGGCCGGGC TGAT GTTCGGCCATAGCCTGGCG TTGTTCTCAGCGGCG yhfC 3622071 - 3623252 + | hypothetical protein TERM 4780 3623259 - 3623288 + F 82 -13.5 -2.8805 | opp_overlap 3623257 3623256 ACGCATTGATAATCC TTGCCGGATGGCG ACAT CGCCCTCCGGCAC TCTATCCCCCCTCCT TERM 4781 3624825 - 3624811 - g 74 -10 -3.74693 | TTCGATGTGACTAAA GGCGAT CTG ATCGCC GCTATCAATAAAGGC TERM 4782 3624888 - 3624877 - g 74 -7.2 -4.08919 | overlap 3624872 AAAGCGGAAACCAAA GCCG GAAC CGGC TGCGGCGGCTGCATC nirB 3623515 - 3626058 + | nitrite reductase large subunit nirD 3626055 - 3626381 + | nitrite reductase small subunit TERM 4783 3626389 - 3626409 + F 100 -12.5 -5.72118 | overlap 3626390 GCGGTTAATTATTTT TGGGAGGCG CAA CGCCTCCCC TTTTTTGTATTTTTT TERM 4784 3626390 - 3626408 + F 100 -16 -3.9778 | overlap 3626389 CGGTTAATTATTTTT GGGAGGCG CAA CGCCTCCC CTTTTTTGTATTTTT TERM 4785 3626505 - 3626483 - f 71 -10 -3.21912 | opp_overlap 3626487, overlap 3626487 GCGGCAACTGAGCAA CAAATTCGTC AGG AACGAATTTG AACAGCCGCTGGCTG TERM 4786 3626528 - 3626549 + F 83 -13.1 -3.14132 | GCTGGCTGCCTTCGG TGAGGGACA AGGA TGTCCCTCA TTAATCCCCAGGAGC nirC 3626647 - 3627456 + | nitrite transporter NirC cysG 3627468 - 3628841 + | siroheme synthase TERM 4787 3628878 - 3628842 - f 71 -9.6 -3.27298 | opp_overlap 3628852, overlap 3628843 3628848 TTCTCTAATCATTAA TTAAAATAACGCCCTG TTATT CAGGGCTTTATTTTAC AACTACTCGTAATCT TERM 4788 3628877 - 3628843 - f 80 -13.1 -2.56164 | opp_overlap 3628852, overlap 3628842 3628848 TCTCTAATCATTAAT TAAAATAACGCCCTG TTATT CAGGGCTTTATTTTA CAACTACTCGTAATC TERM 4789 3628872 - 3628848 - f 81 -8.6 -4.47217 | opp_overlap 3628852, overlap 3628843 3628842 AATCATTAATTAAAA TAACGCCCTG TTATT CAGGGCTTTA TTTTACAACTACTCG TERM 4790 3628852 - 3628868 + F 89 -9.4 -4.65933 | opp_overlap 3628848 3628843 3628842 ATTAATTAAAATAAC GCCCTG TTATT CAGGGC TTTATTTTACAACTA TERM 4791 3634023 - 3633972 - g 76 -5.1 -4.78107 | CACCATGACCAAAAA CGCCTATGCCGATGTGGC-GACCGA CAGC TCGGTAAGCGACGT-GGCGCAGGCG CTGGACGCCGGTTAC bigA 3629167 - 3635028 + | putative surface-exposed virulence protein TERM 4792 3635081 - 3635057 - T 87 -9.9 -4.34759 | opp_overlap 3635060, overlap 3635059 3635060 TATAACACTAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAGATGCGCCTAT TERM 4793 3635079 - 3635059 - T 93 -12.5 -3.76167 | opp_overlap 3635060, overlap 3635057 3635060 TAACACTAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAGATGCGCCT TERM 4794 3635060 - 3635078 + T 100 -16 -4.62069 | opp_overlap 3635059 3635057 3635060 AACACTAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC TERM 4795 3635078 - 3635060 - T 93 -16 -2.84616 | opp_overlap 3635060, overlap 3635059 3635057 AACACTAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAGATGCGCC tnpA_5 3635618 - 3635160 - | transposase for IS200 TERM 4796 3635731 - 3635749 + H 100 -16 -4.18197 | opp_overlap 3635721 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCCATAGACAAT TERM 4797 3635789 - 3635768 - H 100 -14.5 -4.42974 | opp_overlap 3635768 TCCATAGACAATAAA GGCCGCTTA TTAT TAAGCGGCC TTTTTAAATCATATC TERM 4798 3635768 - 3635789 + H 100 -14.5 -4.69664 | opp_overlap 3635768 TCCATAGACAATAAA GGCCGCTTA TTAT TAAGCGGCC TTTTTAAATCATATC yhfL 3635932 - 3636102 + | putative outer membrane lipoprotein TERM 4799 3636145 - 3636131 - T 100 -11.4 -5.76633 | opp_overlap 3636131 GCAGATACAAAAAAA CCGGGA TTT TCCCGG TTTTTTTACAGGTCT TERM 4800 3636131 - 3636145 + T 100 -11.4 -5.42862 | opp_overlap 3636131 GCAGATACAAAAAAA CCGGGA TTT TCCCGG TTTTTTTACAGGTCT trpS 3637251 - 3636247 - | tryptophanyl-tRNA synthetase gph 3638002 - 3637244 - | phosphoglycolate phosphatase rpe 3638672 - 3637995 - | ribulose-phosphate 3-epimerase TERM 4801 3638677 - 3638689 + r 75 -6.3 -4.43307 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTCTTGCAGG dam 3639526 - 3638690 - | DNA adenine methylase TERM 4802 3639052 - 3639064 + g 74 -3.3 -4.83615 | opp_overlap 3639050 3639053, overlap 3639053 ACTCACAGTAAAAGA ACGCA TTC TGCGC TTTTTCTGCAAAGTG TERM 4803 3639063 - 3639053 - G 74 -6.8 -4.29302 | opp_overlap 3639053 3639052, overlap 3639050 CTCACAGTAAAAGAA CGCA TTC TGCG CTTTTTCTGCAAAGT TERM 4804 3639410 - 3639389 - G 83 -7.3 -4.60073 | overlap 3639390 3639404 GATATAACGAGAAAA GTCGGTGTT AAGA AACACCGAT CCGGCACCCACAAAA TERM 4805 3639409 - 3639390 - G 73 -10.8 -3.34959 | overlap 3639389 3639404 ATATAACGAGAAAAG TCGGTGTT AAGA AACACCGA TCCGGCACCCACAAA damX 3640984 - 3639707 - | hypothetical protein TERM 4806 3640707 - 3640723 + g 74 -2.2 -5.09426 | gap 1, overlap 3640709 3640710 ATGTATTGACGAGAG GCTGGCT TATG GGCC-GC TTTTTTACGCTTACG TERM 4807 3641064 - 3641044 - R 75 -2.6 -5.15969 | CCTGAAGCTAAAAAA CTGACATC TACGC AATATCAG TTTGACCTTTCTTGT aroB 3642170 - 3641082 - | 3-dehydroquinate synthase TERM 4808 3641874 - 3641897 + g 80 -4.5 -5.08824 | opp_overlap 3641855, overlap 3641876 GCCGCCAAGCGCGAC CAGCGTGGT ATCACG ACCATGCGG TTTTTTCAGTAACGC TERM 4809 3642116 - 3642094 - G 85 -12.8 -3.53712 | overlap 3642090 3642112 AGCGGCAAGAATGAA GCTGGTTCGT TAA ACAAACCAGC CGCGATGGTGATCGG aroK 3642748 - 3642227 - | shikimate kinase I hofQ 3644451 - 3643213 - | outer membrane porin HofQ TERM 4810 3643379 - 3643365 - GR 74 -2 -5.00616 | opp_overlap 3643378, overlap 3643367 TTTTTCGCGAAAAAA TACCGC CCA GCGCCA GCGTCTCGCCGCTTT TERM 4811 3644061 - 3644074 + gr 70 -9.5 -3.03441 | CCGCTTTCGCCAGTT CGCCG GCAT CGGCG TATTGCAGGCTAATG yrfA 3644767 - 3644366 - | putative inner membrane protein yrfB 3645230 - 3644757 - | putative inner membrane protein yrfC 3645753 - 3645214 - | putative inner membrane protein TERM 4812 3645286 - 3645304 + g 74 -10.2 -3.53224 | CCCTTGCGCATCCTG CCGCGTGG CGC CCGTGCGG TTTAGCGGAAAACTG TERM 4813 3645653 - 3645627 - G 76 -2.8 -5.00616 | opp_overlap 3645631, overlap 3645631 CCTCCTGCCAAAAAA CCAACCGGGCGA TCG TCGCGAGGCTTG CTATCAGCAGCAGGG yrfD 3646532 - 3645753 - | putative periplasmic protein TERM 4814 3646070 - 3646035 - G 71 -10.5 -3.21194 | gap 1, overlap 3646036 TATAAACGGCAGCAA GC-GCTGTAACGCGCA GGCAT CGGGCGTTACAGCAGC GATGCGCACATTGAG TERM 4815 3648042 - 3648014 - g 70 -9.5 -3.32159 | TCAGAGTAAATTTAA CCGCGCGACGCAA GCT TTGCGTCAGGTGG GGTCGAACATCAAAC TERM 4816 3648668 - 3648647 - g 83 -10.1 -4.07568 | overlap 3648660 3648662 GCTGGTCGCGCAAAA CGGCACGCA GGAA TACGCGCCG CATGTGATCAATACG TERM 4817 3648682 - 3648692 + G 74 -8.2 -3.96148 | opp_overlap 3648680 3648662 3648660 3648682 CGCATGTGATCAATA CGCC GCT GGCG TTTCTGATCAAAAGC mrcA 3646629 - 3649205 + | peptidoglycan synthetase TERM 4818 3649207 - 3649234 + T 86 -11.4 -3.81755 | opp_overlap 3649214, overlap 3649214 ACGAACTGTTCTGAT CAAAAAAGGCGC TCCG GCGCCTTTTTTA TTGTGTTTAGCGGAT TERM 4819 3649227 - 3649214 - T 100 -9.5 -5.14563 | opp_overlap 3649214 3649207 GTTCTGATCAAAAAA GGCGC TCCG GCGCC TTTTTTATTGTGTTT TERM 4820 3649214 - 3649227 + T 100 -9.5 -5.66338 | opp_overlap 3649214, overlap 3649207 GTTCTGATCAAAAAA GGCGC TCCG GCGCC TTTTTTATTGTGTTT nudE 3649864 - 3649301 - | ADP-ribose diphosphatase NudE TERM 4821 3649920 - 3649937 + H 90 -9.9 -4.54343 | opp_overlap 3649909 CATACCGCACGGTTT CGGCAAT GCGA ATTGCCG TTTATTTACATTTAT TERM 4822 3651351 - 3651336 - g 74 -7.6 -4.21936 | GCGACAACGGTAAAA CAGCTT GAAA AAGCTG GCGTGCGGGTGGGCG yrfF 3650187 - 3652319 + | putative inner membrane protein TERM 4823 3652640 - 3652660 + G 77 -8.1 -4.07885 | TTTGCGCCATGACGA CGGCGCAAG GGC CGCGCGCCG TTTTGCGCGACGATA yrfG 3652384 - 3653052 + | putative hydrolase TERM 4824 3653089 - 3653074 - g 77 -4.6 -4.93877 | overlap 3653076 CGCCATGAAAGAAAA GTCCTC CGTT GAGGTC AGACTGGATAAATGG TERM 4825 3653149 - 3653130 - g 74 -7 -4.36914 | CGCGTTTTTATAAAA CCCGCGCG ATGG CCCGCGAG ATGATTGAAGGCGGT TERM 4826 3653370 - 3653355 - g 85 -4.6 -5.16472 | overlap 3653357 AAAAACGCGAAAAAA TGGCGC AGGC GCGCAA GCTTAACGCCCTGAC yrfH 3653063 - 3653464 + | ribosome-associated heat shock protein Hsp15 hslO 3653489 - 3654367 + | Hsp33-like chaperonin yhgE 3656186 - 3654477 - | putative inner membrane protein TERM 4827 3654613 - 3654597 - G 71 -5.7 -4.36914 | opp_overlap 3654599, overlap 3654598 3654599 TTGCGTCTTAGAAAA CCCGTCC GGC AGTCGGG CGAACGCTTTCTGCG TERM 4828 3656413 - 3656401 - H 71 -3.3 -4.77165 | TTTTCCACAACAAAA GTAGG TTT CCTGC CATAATAACCGCCGC TERM 4829 3658100 - 3658087 - g 72 -3.8 -4.74801 | overlap 3658089 3658091 CAATGGCAGGAAAAA GCCA CCGCGC TGGC GAAACTGTTCATTGA pckA 3656566 - 3658182 + | phosphoenolpyruvate carboxykinase TERM 4830 3658222 - 3658190 - T 76 -11.9 -2.54276 | opp_overlap 3658190, overlap 3658189 3658187 AGCTGTAAGGAACAG GCCGGATGGCGGCTT TGA ACGGCGTCATCCGGC GTTGAGAAGAAAGGG TERM 4831 3658256 - 3658231 - T 83 -13.4 -3.28791 | opp_overlap 3658223 3658231 3658235, overlap 3658235 ATCCGGCGTTGAGAA GAAAGGGAGG GTAATA CCTCCCTTTC TTATGCCTCTTTTGT TERM 4832 3658231 - 3658256 + T 90 -13.4 -3.4799 | opp_overlap 3658231 3658235, overlap 3658223 3658235 ATCCGGCGTTGAGAA GAAAGGGAGG GTAATA CCTCCCTTTC TTATGCCTCTTTTGT TERM 4833 3658235 - 3658252 + T 79 -8.4 -4.35091 | opp_overlap 3658231 3658235, overlap 3658231 3658223 GGCGTTGAGAAGAAA GGGAGG GTAATA CCTCCC TTTCTTATGCCTCTT TERM 4834 3658252 - 3658235 - T 79 -8.4 -4.30719 | opp_overlap 3658235 3658231 3658223, overlap 3658231 GGCGTTGAGAAGAAA GGGAGG GTAATA CCTCCC TTTCTTATGCCTCTT envZ 3659609 - 3658257 - | osmolarity sensor protein ompR 3660325 - 3659606 - | osmolarity response regulator TERM 4835 3660733 - 3660709 - g 90 -5.7 -5.22006 | gap 1 TCAGTATAATAAAAA GCGCCTG-CG TGAGAT CGACAGACGC GTCAGATATCTGACC greB 3660551 - 3661024 + | transcription elongation factor GreB TERM 4836 3662698 - 3662679 - g 77 -8.6 -4.10161 | gap 1 CATGATGGCGCAAAA CATCGTCGC CTG GCG-CGATG AGAACGGTCAGTTCC TERM 4837 3663017 - 3662995 - g 78 -6.8 -4.62904 | opp_overlap 3662995 3662994 3662998, overlap 3662996 AAAGAGCTGGAAAAA CCGGGCCGCG ACC CGCGTCCTGA ATTTAAAACCGCGCA TERM 4838 3663334 - 3663294 - g 84 -13.8 -3.13403 | overlap 3663305 GCGTCTGGACGAACA GCCCGGCGAAACCGCCGC TCGCC GCGGCGGCGGCGCCGATC GCGCTCAGGGCAACC TERM 4839 3663326 - 3663305 - g 89 -13.7 -3.54307 | gap 1, overlap 3663294 AACAGCCCGGCGAAA CCGCCGCTCG CCG CG-GCGGCGG CGCCGATCGCGCTCA TERM 4840 3663376 - 3663364 - g 74 -6.9 -4.25104 | CGCCCGGCATCAAAA GCGGC GAA ACCGC GCGGTCGTGACGCCC yhgF 3661126 - 3663453 + | putative RNase R TERM 4841 3663463 - 3663496 + F 95 -13.1 -4.14739 | opp_overlap 3663464, overlap 3663464 CGCTAATCGGGTAAT ACGCAGGCCGGGTTA CTTC TTATCCGGCCTGCGA TTTTGCAATACGTCC TERM 4842 3663464 - 3663495 + F 100 -16.6 -3.08522 | opp_overlap 3663464, overlap 3663463 GCTAATCGGGTAATA CGCAGGCCGGGTTA CTTC TTATCCGGCCTGCG ATTTTGCAATACGTC TERM 4843 3663495 - 3663464 - f 88 -14.4 -3.04322 | opp_overlap 3663464 3663463 GCTAATCGGGTAATA CGCAGGCCGGGTTA CTTC TTATCCGGCCTGCG ATTTTGCAATACGTC TERM 4844 3663701 - 3663684 - f 73 -4.2 -4.7908 | AAAAAGACAAATAAA TGTTGA GCCATA TCAACA TCGGCGCAAATTATC feoA 3663890 - 3664117 + | ferrous iron transport protein A TERM 4845 3664159 - 3664145 - g 89 -2.8 -5.56112 | opp_overlap 3664145 ATAAAAATGAAAAAA TTAACC ATT GGTTTA ATTGGTAATCCTAAT TERM 4846 3664983 - 3664994 + G 100 -5.8 -5.84381 | TCCTGAACCGCTTCC TCGG CTTA CCGA TTTTTTTGTTCGTGA feoB 3664136 - 3666454 + | ferrous iron transport protein B yhgG 3666467 - 3666703 + | putative cytoplasmic protein TERM 4847 3666758 - 3666787 + F 100 -15.1 -4.21462 | gap 1 TTATCCCGCGTTATG TTGCCCGGTACGCG TCA CGC-TGCCGGGCAA TTTTGCGTCATGCCT TERM 4848 3667366 - 3667396 + G 71 -8.2 -3.8647 | TGAATTTGCCGACCC GGTGATGGCGCGTA AGC TATACGCCACCGCC TTTCCTCTGGTCGAT STM3508 3666938 - 3667852 + | putative cytoplasmic protein bioH 3668658 - 3667888 - | carboxylesterase BioH yhgH 3668696 - 3669379 + | gluconate periplasmic binding protein yhgI 3669438 - 3670013 + | putative DNA uptake protein TERM 4849 3670032 - 3670058 + F 78 -12.3 -2.57132 | gap 1, overlap 3670031 TTTCCCCGCATCCAT GCCCGAT-GGCG CTTG CGCCTGTCGGGC CTTGTCAGCCCCACC gntT 3670390 - 3671706 + | high-affinity gluconate permease TERM 4850 3671796 - 3671827 + T 100 -20.4 -4.44667 | opp_overlap 3671796 3671799 3671803, overlap 3671803 TACGTGCTCTCAACA TAATAAAGCCGGGG AAAT CCCCGGCTTTATTA TTTCTTCTTCGCGGC TERM 4851 3671827 - 3671796 - T 100 -20.4 -3.01924 | opp_overlap 3671796 3671803, overlap 3671799 3671803 TACGTGCTCTCAACA TAATAAAGCCGGGG AAAT CCCCGGCTTTATTA TTTCTTCTTCGCGGC TERM 4852 3671824 - 3671799 - T 100 -17.7 -3.65812 | opp_overlap 3671796 3671803, overlap 3671796 3671803 GTGCTCTCAACATAA TAAAGCCGGGG AAAT CCCCGGCTTTA TTATTTCTTCTTCGC TERM 4853 3671820 - 3671803 - T 100 -14.1 -4.46073 | opp_overlap 3671796 3671803, overlap 3671799 3671796 TCTCAACATAATAAA GCCGGGG AAAT CCCCGGC TTTATTATTTCTTCT TERM 4854 3671803 - 3671820 + T 100 -14.1 -4.69324 | opp_overlap 3671803 3671799 3671796, overlap 3671796 TCTCAACATAATAAA GCCGGGG AAAT CCCCGGC TTTATTATTTCTTCT malQ 3673903 - 3671825 - | 4-alpha-glucanotransferase TERM 4855 3673374 - 3673342 - G 73 -9.1 -3.86015 | overlap 3673370 3673371 GATTCGCCGGATAAA GCGCGTGGATCGG ATTCAGG CCGATAAACGCGC CGCCGCGTGTCGCCA TERM 4856 3673585 - 3673618 + g 76 -3 -5.00884 | opp_overlap 3673605, overlap 3673586 3673587 3673590 TCAACGTCAGGGTGT GGTAGCCCTCCGGC AATGTA GCCGGAAGGTTAAG TTTTTTACCGCCCGT TERM 4857 3673590 - 3673613 + g 71 -9.5 -3.52177 | opp_overlap 3673605, overlap 3673587 3673586 3673585 GTCAGGGTGTGGTAG CCCTCCGGC AATGTA GCCGGAAGG TTAAGTTTTTTACCG TERM 4858 3673703 - 3673713 + g 81 -2.4 -5.40072 | ACCGCGCCCCTCTAC CGGC AAC GCCA TTTTTTTACCCGCGG malP 3676306 - 3673913 - | maltodextrin phosphorylase TERM 4859 3675491 - 3675505 + g 76 -2.8 -5.00884 | GCACTGGAAGTATTG CTGC ATCAGGC GCAG TTTTTTGCCCGCCGT TERM 4860 3677318 - 3677328 + G 74 -2.4 -5.06816 | ATCCGGTGATTCACG ACGC GAT GCGC TTTTTCTTACGGCAT TERM 4861 3677691 - 3677705 + G 85 -4.2 -5.26875 | ACTGGATAACGTGGA TGTCAG CAC CCGACA TTTTTTACTTAAAAG TERM 4862 3679147 - 3679134 - g 71 -4.5 -4.56775 | gap 1, opp_overlap 3679134 ATCCGGGCGGAAAAA CGACGC CCA GCG-CG TATTGCTTGATGCCT malT 3676900 - 3679605 + | transcriptional regulator MalT STM3516 3679968 - 3679693 - | putative cytoplasmic protein STM3517 3680231 - 3679971 - | putative DNA-damage-inducibile protein rtcA 3681359 - 3680340 - | RNA 3'-terminal-phosphate cyclase TERM 4863 3681081 - 3681033 - G 71 -11 -2.96873 | gap 2, overlap 3681030 3681035 ACCGTCAGCAAACCA CAGCGCGGGCAGGACGGTTTGCAG CAC CAGCATACAA-C-TGCCCGCGCTG CCAATCGCAAAACGG TERM 4864 3681142 - 3681130 - G 74 -7.7 -4.07568 | GGCCCCGGCGTAAAA CGCAA CTG TTGCG AGCCCAGCTCGTCGC rtcB 3682580 - 3681363 - | putative cytoplasmic protein TERM 4865 3681772 - 3681785 + g 71 -4.5 -4.56597 | overlap 3681773 TTGATCTCGTCCATA TCGAG GGCG CTCGG TTTTTCCACGCAGCG TERM 4866 3681797 - 3681819 + g 80 -9 -4.21194 | overlap 3681798 TCGGTTTTTCCACGC AGCGCTGGAG CGC CGCCAGCGCG TTTTCCATCATCGCC TERM 4867 3681798 - 3681818 + g 81 -12.5 -3.12395 | overlap 3681797 CGGTTTTTCCACGCA GCGCTGGAG CGC CGCCAGCGC GTTTTCCATCATCGC TERM 4868 3682480 - 3682467 - G 75 -5.9 -4.65263 | opp_overlap 3682465 3682467 ATGTTTGAAAATAAA CGGCA TTTT CGCCG TATTGATCAGCTGCT STM3521 3684678 - 3683125 - | putative ribonucleoprotein related-protein TERM 4869 3683296 - 3683314 + g 74 -4.5 -4.75174 | gap 1, opp_overlap 3683292 ATCGATACACACCAG GCGC-GCC TGCG GGTTGCGC TTTTTCAGTTCGATC TERM 4870 3684055 - 3684071 + g 77 -3.5 -5.00884 | opp_overlap 3684055 GTCGCCTTCACGAAA CGCCAGC AGC GCGCGCG TTTTTTCCGGCAGCT rtcR 3684868 - 3686451 + | sigma N glpR 3687206 - 3686448 - | DNA-binding transcriptional repressor GlpR TERM 4871 3686960 - 3686972 + g 100 -9.1 -5.16151 | GGGCCGCGACTTTGC GAGCG ATG CGCTC TTTTTCTTCCGTTTG TERM 4872 3687295 - 3687274 - R 74 -5.9 -4.56597 | gap 1 CCCGGCCTGGAAAAA TATCTCGACC ACA GGCCG-GATA CGCCTCACGTTCGTT glpG 3688130 - 3687300 - | intramembrane serine protease GlpG glpE 3688532 - 3688206 - | thiosulfate sulfurtransferase TERM 4873 3688423 - 3688413 - G 71 -8.2 -3.76952 | GTTAGTCAAGTGAAA CGCC TGC GGCG CATGACCCATGGCAT TERM 4874 3688681 - 3688696 + H 82 -7.6 -4.70879 | GTTTCTTTGCTATTA TGTTCG ATAA CGAACA TTTTTGAACTTTAAC TERM 4875 3689768 - 3689756 - g 74 -6.9 -4.3129 | opp_overlap 3689755 3689754 3689756, overlap 3689758 TATTCATGATGAAAA CGGCA AAG CGCCG CTGCTTTCCGTGTTT glpD 3688731 - 3690239 + | glycerol-3-phosphate dehydrogenase TERM 4876 3690249 - 3690266 + T 95 -12.7 -4.08767 | opp_overlap 3690245 3690247 3690246 TCGTAATAAAATCCG GGGCGGT TTAT ACCGCCC TTTTCGCCACATACC STM3527 3690831 - 3690286 - | hypothetical protein STM3528 3692400 - 3690841 - | putative periplasmic phosphate-binding protein TERM 4877 3692441 - 3692472 + r 93 -7.2 -5.63517 | opp_overlap 3692440 AAACATTCACGATAG CGGCAGACAGAAGT TGAA AGTTCCGGCTGCCG TTTTTTATTTACAGG gldA 3693603 - 3692494 - | glycerol dehydrogenase TERM 4878 3693132 - 3693115 - G 77 -4.1 -4.98531 | gap 1, overlap 3693116 3693117 CCCGGAAACCAAAAA GCGTACCG GCG CGGCA-GC AATAATACTGCTGTC TERM 4879 3695476 - 3695494 + G 81 -13.2 -2.87344 | opp_overlap 3695462 3695461 GCGGCGGTCGCGCGG TCCGTCAC CAT GTGACGGA TATCTGCGACGGCTG STM3531 3695271 - 3696986 + | putative dihydroxyacid dehydratase TERM 4880 3696992 - 3697013 + F 79 -9.3 -4.11692 | opp_overlap 3696987, overlap 3696994 GCTTAAATAATATCC CTGGCGGGC TACG GCTCGCCTG TTTTAAGGATCAATA TERM 4881 3696994 - 3697011 + F 79 -10.5 -3.65542 | opp_overlap 3696987, overlap 3696992 TTAAATAATATCCCT GGCGGGC TACG GCTCGCC TGTTTTAAGGATCAA STM3532 3697030 - 3697935 + | putative dihydrodipicolinate synthetase TERM 4882 3697941 - 3697970 + T 100 -8.6 -5.27335 | gap 1, opp_overlap 3697948, overlap 3697948 GGGACTTTAAGCGAT GACGAAAGCGGGC TTCTT GCCCGCTAT-GTC TTTTTATTTCAGCAC TERM 4883 3697964 - 3697948 - T 83 -10.8 -3.80461 | opp_overlap 3697941 3697948 TAAGCGATGACGAAA GCGGGC TTCTT GCCCGC TATGTCTTTTTATTT TERM 4884 3697948 - 3697964 + T 77 -10.8 -3.40971 | opp_overlap 3697948, overlap 3697941 TAAGCGATGACGAAA GCGGGC TTCTT GCCCGC TATGTCTTTTTATTT STM3533 3698734 - 3697979 - | putative transcriptional regulator TERM 4885 3698542 - 3698554 + g 70 -2.7 -4.7373 | ACAGGCGTAGCCCCA GATAA TAC TTGTC TTTTTCCTGGCGTAA TERM 4886 3698893 - 3698876 - R 100 -14.1 -5.32882 | opp_overlap 3698876 TACCACGATAAAAAA CGGGGCC GTTT GGCCCCG TTCTCAAGCGTTAAA TERM 4887 3698876 - 3698893 + r 90 -14.1 -3.31322 | opp_overlap 3698876 TACCACGATAAAAAA CGGGGCC GTTT GGCCCCG TTCTCAAGCGTTAAA glgP 3701359 - 3698912 - | glycogen phosphorylase TERM 4888 3699950 - 3699962 + g 71 -10.5 -3.18681 | opp_overlap 3699920 CGCCAGCCAGCGGCG CGGCG TAA CGCCG TTAGTGACGTTACAA TERM 4889 3700485 - 3700458 - G 70 -9.8 -3.33492 | overlap 3700459 3700461 TTATGCAGTTGATAA TGACGGTGCAGG ATAT CCTGTACCGTCG CCGAGACCAGAAAAT TERM 4890 3700484 - 3700459 - G 78 -13.3 -2.59881 | overlap 3700458 3700461 TATGCAGTTGATAAT GACGGTGCAGG ATAT CCTGTACCGTC GCCGAGACCAGAAAA TERM 4891 3700518 - 3700500 - G 79 -7.4 -4.50976 | GCCGAGACCAGAAAA TACTCCTG GCG CAGGCGTA GCTCTCGTCCGGAAT glgA 3702812 - 3701379 - | glycogen synthase TERM 4892 3701520 - 3701500 - G 72 -4 -4.75289 | gap 2, overlap 3701501 3701503 3701504 GACCACAACACAAAA GC-ACGC-CG AAT CGCGCGTAGC AACGACCAGGCATTA glgC 3704107 - 3702812 - | glucose-1-phosphate adenylyltransferase glgX 3706098 - 3704122 - | glycogen debranching enzyme TERM 4893 3705919 - 3705899 - G 70 -8.9 -3.64103 | overlap 3705900 TAGCCATAGCGCAAA CCTGGCCTG GCG CCGGCCAGA TAACCATGCCAGACA TERM 4894 3705955 - 3705923 - G 71 -10 -3.48276 | overlap 3705926 3705935 GCGCCGGCCAGATAA CCATGCCAG-ACATCG CCG CGACGTCCTGGCA-GG TCATAGCGACGCTCA TERM 4895 3705953 - 3705926 - G 71 -11.4 -2.88822 | gap 1, overlap 3705923 3705935 CCGGCCAGATAACCA TGCCAG-ACATCG CCG CGACGTCCTGGCA GGTCATAGCGACGCT TERM 4896 3706005 - 3705990 - G 74 -3.2 -4.8622 | overlap 3705991 CTCGGGAATCAAAAA CGCACA GCTC TACGCG CTCCGCATGGGCGGA TERM 4897 3706040 - 3706026 - G 74 -10 -3.6422 | overlap 3706024 CATGGGCGGAAAAGA GCGTGA AAT TCACGC CATGACCGTCATACG glgB 3708281 - 3706095 - | glycogen branching enzyme TERM 4898 3708530 - 3708515 - R 91 -6.1 -5.48825 | opp_overlap 3708514 TATTACGCAAAAAAA GGGTG ACGATG CACCC CTGGTTTAACACAAA TERM 4899 3708563 - 3708576 + r 73 -9.5 -3.30124 | TCCCCGCCGGATGGC GGCGC TGAC GCGCC TTATCCGGCCTACAG TERM 4900 3708671 - 3708613 - R 70 -8.8 -3.30243 | gap 1 ACGCAGGCCCGATAA GCGCTGCAATAGCCACTACGCCAACTG GCGCAG CATTCGACGCAGCGGCT-CGGCGGCGC CCCATAACAACTGGT asd 3709734 - 3708628 - | aspartate-semialdehyde dehydrogenase TERM 4901 3710093 - 3710068 - R 93 -6.2 -5.80364 | gap 2 ACCTCAATAAAAAAA CCGGGT-A-GCG ATTA CGCCTTACCCGG CTTACGGTGTCGATA gntU 3711498 - 3710158 - | low affinity gluconate transporter TERM 4902 3710841 - 3710825 - G 76 -10.9 -3.66356 | overlap 3710828 AGGCTGAAGCCGAAA GAAGGCA TTT TGCCTTC GCCCAGATGCGGCTC TERM 4903 3711438 - 3711407 - G 75 -13 -2.54192 | opp_overlap 3711415, overlap 3711406 GAGACGACCATTAAC GCGACGAAGGCGTG CATA CGCGCCTTCATCAC CAAAAACAGCAGCAG gntK 3712028 - 3711495 - | gluconate kinase 1 gntR 3713162 - 3712167 - | gluconate operon transcriptional repressor TERM 4904 3712654 - 3712621 - G 75 -12.5 -2.64422 | gap 1, opp_overlap 3712627, overlap 3712611 AGATAGGCGATATGA CGATGACCACGCGCGA TAA TCGCG-GCGGTCATCT GACGGGCGGCCTCGA TERM 4905 3713271 - 3713239 - R 70 -4.8 -4.40993 | gap 1, opp_overlap 3713249 GACAAACGATGAAAA GCCGGATGGCAACGC TTTC GCGTCTT-ATCCGGC CTACAAAAGGTTACA yhhW 3713987 - 3713292 - | putative cytoplasmic protein TERM 4906 3713575 - 3713617 + g 70 -6.9 -4.16016 | gap 1, overlap 3713576 3713576 AGTTGCTTGCCCTGC GCGGCGTCGAAGCGGCGCTG TTCG TAGCGCGGCGT-GATGCCGG TTTCTTGCGGAATGA yhhX 3715148 - 3714111 - | putative dehydrogenase TERM 4907 3714790 - 3714772 - G 70 -5.3 -4.50241 | gap 1, overlap 3714763 AAACAGGAATCAAAA CGCCG-AT TCTG ATACGGCG TGACGGTCAGTCCTT TERM 4908 3715425 - 3715410 - H 100 -10.4 -6.17292 | AAACCCAAAAAAAAA GCCAGC AAAA GCTGGC CAAAATAATACTGGA yhhY 3715617 - 3716105 + | putative acetyltransferase YhhY TERM 4909 3717123 - 3717110 - g 87 -2.4 -5.60993 | TCTCGCACAAAAAAA TGAC ATACCG GTCA TCATCAATCCAGCGC STM3547.Sc 3716637 - 3717584 + | putative transcriptional regulator TERM 4910 3717915 - 3717903 - g 81 -4.1 -5.2853 | CAGCTAAAAATAAAA CCAAA CGC TCTGG AGTCCATTAAAGAGT STM3548 3717600 - 3718361 + | putative cytoplasmic protein TERM 4911 3718393 - 3718366 - f 100 -5.6 -5.86976 | opp_overlap 3718370 3718387, overlap 3718369 3718370 CCAGAAAATAAAAAA CAATGGAGTAAC GAAA GTTACTCCTTTT ATAAAATATAAGGAT TERM 4912 3718390 - 3718369 - f 85 -7.3 -4.94109 | opp_overlap 3718370 3718387, overlap 3718366 3718370 GAAAATAAAAAACAA TGGAGTAAC GAAA GTTACTCCT TTTATAAAATATAAG TERM 4913 3718389 - 3718370 - f 79 -10.8 -3.52805 | opp_overlap 3718370 3718387, overlap 3718369 3718366 AAAATAAAAAACAAT GGAGTAAC GAAA GTTACTCC TTTTATAAAATATAA TERM 4914 3718370 - 3718389 + F 93 -10.8 -4.41548 | opp_overlap 3718370 3718369 3718366, overlap 3718387 AAAATAAAAAACAAT GGAGTAAC GAAA GTTACTCC TTTTATAAAATATAA STM3549 3718415 - 3719386 + | putative inner membrane protein STM3550 3719383 - 3720417 + | putative phosphotriesterase TERM 4915 3720450 - 3720426 - T 86 -12.1 -3.62591 | overlap 3720428 GGCATAATCTGCAAA TAGCCCGGTGT CTG ACACCGGGCCT GGAATTAAAAATCAG TERM 4916 3720448 - 3720428 - T 100 -16.9 -3.39028 | overlap 3720426 CATAATCTGCAAATA GCCCGGTGT CTG ACACCGGGC CTGGAATTAAAAATC ggt 3722204 - 3720462 - | gamma-glutamyltranspeptidase periplasmic precursor TERM 4917 3720613 - 3720624 + g 77 -7.2 -4.37092 | AACTTTAGCGTATCG GGGC TGAA GCCC TTTTCTACCCGCAGT TERM 4918 3721050 - 3721067 + g 71 -4.7 -4.55287 | overlap 3721052 CTGGTTGCTTTCATA CGGGGCG AGCT TGCCCGG TTTTATCTGGCTGGA yhhA 3722330 - 3722746 + | hypothetical protein ugpQ 3723499 - 3722759 - | cytoplasmic glycerophosphodiester phosphodiesterase TERM 4919 3722855 - 3722808 - G 86 -15.1 -2.87564 | gap 3, opp_overlap 3722816, overlap 3722811 3722815 CGATCGGTGCAGATA CAATCCACGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC-T-GATTG ACGGTATACACCAGA TERM 4920 3722853 - 3722811 - G 77 -11.3 -3.58726 | gap 2, opp_overlap 3722816, overlap 3722808 3722815 TCGGTGCAGATACAA TCCACGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC-TGAT TGACGGTATACACCA TERM 4921 3722850 - 3722815 - G 83 -15.4 -2.64877 | gap 1, opp_overlap 3722816, overlap 3722811 3722808 TGCAGATACAATCCA CGCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGCT GATTGACGGTATACA TERM 4922 3722816 - 3722849 + g 83 -14.5 -2.72991 | gap 1, opp_overlap 3722815 3722811 3722808 GCAGATACAATCCAC GCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC TGATTGACGGTATAC ugpC 3724566 - 3723496 - | glycerol-3-phosphate transporter ATP-binding subunit ugpE 3725413 - 3724568 - | glycerol-3-phosphate transporter membrane protein TERM 4923 3724872 - 3724856 - G 91 -10.1 -4.57073 | overlap 3724840 GATGTCGCGGAAAAA GCGCATC GGC GACGCGC CGTCAATACGGGCCG ugpA 3726297 - 3725410 - | glycerol-3-phosphate transporter permease TERM 4924 3726318 - 3726352 + r 90 -13.7 -3.36671 | gap 1 TTCTTTTCCTGGAAG GTGCCGGATGGCGGTG CATG CACC-TTATCCGGCAC TTATACACTTAAGAT ugpB 3727677 - 3726361 - | glycerol-3-phosphate transporter periplasmic binding protein TERM 4925 3726570 - 3726580 + g 72 -2.4 -4.93296 | overlap 3726569 GGCGAGTGGCGATAT CCGC ACC GGGG TTTTTATCGTAATAA TERM 4926 3726633 - 3726647 + g 85 -4.9 -5.16237 | overlap 3726634 AGGCGGCGGTGGTAA TCGGC AGGTA GCCGG TTTTTTGATGCCATT TERM 4927 3727706 - 3727719 + r 72 -5.2 -4.66537 | opp_overlap 3727716, overlap 3727705 TTTTGTGCCGGGATG CGCG ATATCA CGCG TTTTATGTTCGCGGG TERM 4928 3727792 - 3727766 - R 70 -2.4 -5.04175 | overlap 3727769 CGAATGACAGAAAAA TAACTTTTTTAT TAC AAAAAAAAGATA GTAAGGCGACAGAGA STM3558 3728304 - 3727936 - | death-on-curing protein yhhV 3728528 - 3728301 - | putative cytoplasmic protein TERM 4929 3728576 - 3728589 + r 76 -8.1 -4.14013 | opp_overlap 3728529 3728528 3728576 ACATGTACAAAAAAA GAGCC ATCA GGCTC TTTTGAAAAATTTTA TERM 4930 3728589 - 3728576 - R 100 -8.1 -5.65177 | opp_overlap 3728576, overlap 3728529 3728528 ACATGTACAAAAAAA GAGCC ATCA GGCTC TTTTGAAAAATTTTA livF 3729367 - 3728654 - | leucine/isoleucine/valine transporter ATP-binding subunit livG 3730136 - 3729369 - | leucine/isoleucine/valine transporter ATP-binding subunit TERM 4931 3729747 - 3729778 + g 88 -11.6 -4.07568 | gap 1, opp_overlap 3729773, overlap 3729736 CGCCGCGCGGTCCAG CGCTTCGCTTTGCGC GCG GCGGAAAGCGG-GCG TTTTCAACAGGCCGG livM 3731410 - 3730133 - | leucine/isoleucine/valine transporter permease subunit livH 3732333 - 3731407 - | branched-chain amino acid transporter permease subunit LivH TERM 4932 3732371 - 3732351 - R 75 -9.6 -3.55622 | overlap 3732352 GGTAACCTTTTTAAA CCCGCCCG GCGTG CGGGCGGT GGGATAACTTATCTT TERM 4933 3732370 - 3732352 - R 81 -13.1 -2.73159 | overlap 3732351 GTAACCTTTTTAAAC CCGCCCG GCGTG CGGGCGG TGGGATAACTTATCT livK 3733502 - 3732393 - | high-affinity branched-chain amino acid transporter TERM 4934 3732941 - 3732924 - G 79 -2.7 -5.2112 | opp_overlap 3732932, overlap 3732932 AATACCATCAAAAAA GACAATA TTGG CATTGCC CTGCTTCAGGCCATC yhhK 3733924 - 3734307 + | putative acetyltransferase TERM 4935 3734340 - 3734314 - g 89 -8.7 -4.66535 | gap 1 AAGCGCTAAAAGAAA GCCGGAT-GGCG CTGA CGCTTATCCGGC CTACATGCCGGGAGA STM3566 3734285 - 3734419 + | putative cytoplasmic protein TERM 4936 3734423 - 3734454 + T 73 -10.8 -3.06796 | opp_overlap 3734422 3734423 GGCAAGTTATGAAAT CCCCGGGAGCTTAC ATAA GTAAGTGACCGGGG TTGAATAACGTAGCC livJ 3735599 - 3734502 - | high-affinity branched-chain amino acid transporter TERM 4937 3735090 - 3735125 + g 71 -6 -4.3208 | opp_overlap 3735110 3735111 CAGCCCTTCGCCGTA CTGCTGCTTATCGTGG ATAA TCGCGATGCGCTGCGG TTTTACCTTCTCCAG TERM 4938 3735222 - 3735244 + g 70 -9.8 -3.41051 | GCCGCGCGCGGTCAG CTCCGGCG CGGTCGC CGCCGGGG TTATCATCAGGATGC TERM 4939 3735850 - 3735817 - R 79 -11.8 -3.23274 | gap 1, opp_overlap 3735798 GGCCCGATAAGCGAA GC-GCCATCGGGCAA ACGTA TTGCCGGATGGCAGC GTAAACGCCTTATCC TERM 4940 3735905 - 3735884 - R 100 -10.9 -5.49579 | opp_overlap 3735884 CTACAAAAAACAAAA CCCCCGAAT TCAC ATTCGAGGG TTCATTGGCAATTCG TERM 4941 3735931 - 3735951 + r 76 -5.3 -4.74801 | opp_overlap 3735930, overlap 3735920 ATTCGCGAAGATTAC GCTTCGATC GCA GCGCGAAGC TTTTTCATGGCGTTC rpoH 3736781 - 3735927 - | RNA polymerase factor sigma-32 TERM 4942 3736974 - 3737010 + r 93 -14.5 -3.30903 | opp_overlap 3736967 3736970 AGAGACAACAGGGAC TCTTTCCCTGCGAACGG AAG CCCATTGCAGGGAAAGA TTATACCACGATTTT ftsX 3738082 - 3737027 - | cell division protein FtsX ftsE 3738743 - 3738075 - | cell division protein FtsE ftsY 3740221 - 3738746 - | cell division protein FtsY TERM 4943 3738800 - 3738780 - G 73 -5.3 -4.63486 | overlap 3738781 3738795 AGTGCCTCAATAAAA TCGTCCGCC TTA AACGGACGC AAATCCTCGATACGT TERM 4944 3739176 - 3739150 - G 75 -6.4 -4.61231 | opp_overlap 3739153, overlap 3739151 3739153 GGATAGCGTCAAAAA TCACCGAGGCGG AGT CCGCGCCGGTAT GCTGGGCGATAACCG TERM 4945 3739175 - 3739151 - G 70 -9.9 -3.36256 | opp_overlap 3739153, overlap 3739150 3739153 GATAGCGTCAAAAAT CACCGAGGCGG AGT CCGCGCCGGTA TGCTGGGCGATAACC TERM 4946 3739173 - 3739153 - G 71 -10.3 -3.24422 | opp_overlap 3739153, overlap 3739151 3739150 TAGCGTCAAAAATCA CCGAGGCGG AGT CCGCGCCGG TATGCTGGGCGATAA yhhF 3740347 - 3740943 + | 16S rRNA m(2)G966-methyltransferase yhhL 3740930 - 3741202 + | hypothetical protein yhhM 3741595 - 3741224 - | putative inner membrane protein TERM 4947 3741489 - 3741505 + g 78 -6.5 -4.58283 | overlap 3741502 TTTTGCTGTAACGGC GCCGC CTCATTA GCGGC TTTTTCCCGCCGTTG TERM 4948 3741807 - 3741821 + G 73 -5.6 -4.57569 | overlap 3741798 3741803 CCTATCGCGGGCCAG CCTGGC AAC GCTGGG TTTTTAAGCCCGTCA yhhN 3741737 - 3742363 + | putative inner membrane protein TERM 4949 3742378 - 3742397 + F 80 -12.2 -2.95223 | opp_overlap 3742370 3742371, overlap 3742392 AATAATAGCGCTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTCCGGTTA TERM 4950 3742400 - 3742441 + F 75 -9.5 -3.48593 | opp_overlap 3742370 3742371, overlap 3742392 3742401 GTCGACTCCAGAGTG TATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGACG TTATGTCGACCCCTG TERM 4951 3742401 - 3742440 + F 71 -10.8 -2.68942 | opp_overlap 3742370 3742371, overlap 3742392 3742400 TCGACTCCAGAGTGT ATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGAC GTTATGTCGACCCCT TERM 4952 3743333 - 3743297 - g 95 -15.3 -3.73224 | opp_overlap 3743298 CCAGCTTTGATGAAA GCGCGCT-CACCGGCGA GTCTA TC-CCGGTGGAGCGCGC AACGGGCGACAAAGT zntA 3742444 - 3744642 + | zinc/cadmium/mercury/lead-transporting ATPase TERM 4953 3744653 - 3744675 + F 93 -14.8 -3.30007 | overlap 3744651 3744666 3744668 3744673 ACTAATCTTCTCCCG CCCGGCGGCG TCG TGTCGCCGGG TTATCCCGCGATATT TERM 4954 3745548 - 3745530 - g 70 -8.8 -3.70902 | opp_overlap 3745533, overlap 3745531 3745533 TGGCGCACATTCAAA CGATCGCC GAC GGCGATCT TACCCATGAGATAGA TERM 4955 3745547 - 3745531 - g 72 -12.3 -2.82327 | opp_overlap 3745533, overlap 3745530 3745533 GGCGCACATTCAAAC GATCGCC GAC GGCGATC TTACCCATGAGATAG tcp 3744842 - 3746485 + | methyl-accepting transmembrane citrate/phenol chemoreceptor yhhP 3746754 - 3746509 - | cell developmental protein SirA yhhQ 3746924 - 3747589 + | hypothetical protein TERM 4956 3747762 - 3747740 - g 87 -8.3 -4.6391 | AACAACGATACAAAA GCGTCGGCA GAAAG CGCCGCCGC GGAAAGCCAGGCATC STM3580 3747662 - 3748219 + | hypothetical protein TERM 4957 3748237 - 3748264 + T 100 -14.1 -5.40072 | TTTACGACGATGATG CGGCCTCCGGC AGTGCA GACGGAGGCCG TTTTTTTAAGCGCCA yhhS 3749440 - 3748223 - | hypothetical protein TERM 4958 3748944 - 3748927 - G 71 -10.5 -3.18945 | overlap 3748925 CCCAGGCATAACACA GCACGCC CAGC GGCGCGC CCATCGCCATTGCGC TERM 4959 3749153 - 3749103 - G 71 -6.1 -4.2704 | gap 2, overlap 3749107 CCCAGTAGCAACAAA CTGATCATCGGCCAGGCGCTGGCGA TAT CCGCCAGCAGGTAGCCGA-G-TCCG CTTAAAAAACAGCCG TERM 4960 3750349 - 3750372 + G 72 -3.8 -4.77438 | TTTAACGGTTTTTAC GAGTGCGT ACTGGTCG GCGCGCTC TTTTTGGTGGTCCAT yhhT 3749572 - 3750621 + | putative permease acpT 3750673 - 3751251 + | holo-(acyl carrier protein) synthase 2 nikR 3751343 - 3751744 + | nickel responsive regulator yhhJ 3752958 - 3751834 - | putative ABC transport protein yhiH 3755699 - 3752958 - | putative ABC-type multidrug transport system ATPase component TERM 4961 3753877 - 3753862 - G 74 -6.8 -4.36914 | overlap 3753864 GGCTGTTCGATAAAA TAGCGG GATC CCGCCA GATTGAGCGACCATG TERM 4962 3754803 - 3754790 - G 70 -3.1 -4.7629 | gap 1 CGAGGAAGCCAAAAA TCTCGC CGC GCG-GA ATACGGAAATTAACA yhiI 3756763 - 3755696 - | hypothetical protein TERM 4963 3755767 - 3755778 + g 74 -7.2 -4.1964 | opp_overlap 3755756 GAACCCAGGCCATTC CCGG CAAA CCGG TTTTGACATATTCCA TERM 4964 3755859 - 3755874 + g 70 -6.8 -4.11394 | overlap 3755860 AGCTTCAGCCGTTCA TCGTGG GTTT CCACGG TTTTGGGCGTGAACT TERM 4965 3756408 - 3756420 + g 70 -9.1 -3.71645 | TGTTTGACGACCGAC TGCGC GGC GCGCA TTTCACTCTGGCGTT yhiN 3758265 - 3757069 - | putative periplasmic protein TERM 4966 3757558 - 3757548 - G 77 -8.2 -4.17089 | TGGAAATCTGTAAAA CGGC GGG GCCG GACAGCCCACGATGG TERM 4967 3757975 - 3757965 - G 86 -6.8 -5.07053 | opp_overlap 3757965 3757964 AATCATCGCAAAAAA GCTG TCC CAGC GTTTTCTCATGCCAG TERM 4968 3758515 - 3758535 + G 75 -4 -4.95167 | gap 1 TACATTTGTTTGCTG GCCTGG-AT TTAC ATACCGGGC TTTTATTATTGCTTG TERM 4969 3759115 - 3759096 - g 74 -4.2 -4.68655 | overlap 3759092 GAACGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC GTTCTGGACGCGTAT pitA 3758496 - 3759992 + | low-affinity phosphate transporter TERM 4970 3760031 - 3759999 - T 72 -8.4 -3.77219 | gap 1, overlap 3760000 ATTATTTAAGCCAAA TGGGCCGGA-TAGCG CTGT CGCTAATCCGGCCTG TCAGGATGAAACGAC TERM 4971 3760030 - 3760000 - T 77 -11.9 -2.8585 | gap 1, overlap 3759999 TTATTTAAGCCAAAT GGGCCGGA-TAGCG CTGT CGCTAATCCGGCCT GTCAGGATGAAACGA TERM 4972 3760101 - 3760122 + T 100 -13.7 -5.8187 | opp_overlap 3760098 3760101 GCTTATCTAATACGA GCGGGTCAG GAAA CTGGCCCGC TTTTTTTATTCAGTG TERM 4973 3760122 - 3760101 - T 74 -11.5 -2.75992 | opp_overlap 3760101, overlap 3760098 GCTTATCTAATACGA GCGGGTCAG GAAA CTGGCCCGC TTTTTTTATTCAGTG uspB 3760467 - 3760132 - | universal stress protein UspB uspA 3760855 - 3761289 + | universal stress protein A TERM 4974 3761385 - 3761402 + F 100 -10.5 -4.99043 | opp_overlap 3761385 GGCTATCAACAACAA CGCCCGC TTAT GTGGGCG TTTTGTTTATCCCCC TERM 4975 3761402 - 3761385 - f 74 -8.3 -3.99374 | opp_overlap 3761385 GGCTATCAACAACAA CGCCCGC TTAT GTGGGCG TTTTGTTTATCCCCC TERM 4976 3761707 - 3761730 + G 77 -4.4 -4.8622 | overlap 3761709 CGATTTGGCTATTAC GGCGTCCAGG GCAT CCTGGCGGTC TTTTTCGTTAAACAA yhiP 3761614 - 3763083 + | inner membrane transporter YhiP yhiQ 3763933 - 3763175 - | putative methyltransferase TERM 4977 3763906 - 3763889 - G 74 -9.8 -3.7319 | opp_overlap 3763888 3763887 AGCCAGAACAGATAA GGCGCC GTCTGT GGCGCC CGTTTCATCCATTAA prlC 3765982 - 3763940 - | oligopeptidase A TERM 4978 3765035 - 3765049 + g 71 -4.2 -4.59773 | overlap 3765037 TTTGGCGAAGGCGCG CAGCTG GGC CAGCTC TTTTTCCCCCTGCGG TERM 4979 3766158 - 3766127 - R 73 -10.3 -3.01712 | gap 1, opp_overlap 3766152 GCCGCCCCTTTAACA TCATCCCGGCTTAC GTTTT ATAAGCCGGG-TGA CAACGTCAGCGCGTT STM3595 3767435 - 3766164 - | putative phosphatase TERM 4980 3766295 - 3766319 + g 71 -11.4 -2.98823 | opp_overlap 3766284, overlap 3766312 TTAACGCCTGACGCT GCGCTGGCGA CAGGT TCGGCAGCGC TGTCTGTAGCAGAAC TERM 4981 3767319 - 3767307 - G 70 -9.1 -3.76492 | opp_overlap 3767307 3767307, overlap 3767308 CTCAAGGTCATTAAA GGCGA CGC TCGCC GAGTCGGGCGTCACG TERM 4982 3768081 - 3768045 - g 75 -5.7 -4.59773 | overlap 3768051 GCGGAGTTTCAAAAA GACAACCGCGCCCGCGT GGA ACGCGCTGACGGCTATC AGCAACTGAAAGCCA TERM 4983 3768178 - 3768157 - g 95 -10.9 -4.58773 | overlap 3768151 CTTATGAAATGAAAA CCGACTACC AGGC GGTAGTCAG CGGCATCAGCGAGGG yhiR 3767646 - 3768488 + | putative cytoplasmic protein TERM 4984 3769313 - 3769303 - g 71 -4.6 -4.56775 | overlap 3769305 AGCGGTGGTGAAAAA CGCC GAC GGCA GTCTGACTCTGGAAC gor 3768593 - 3769945 + | glutathione reductase TERM 4985 3769983 - 3769948 - T 82 -13.3 -3.03441 | opp_overlap 3769943 GACCATGCGTTAATA TCTTGTGCGCCCATC TTCAAG GGTGGGCGCACAAGC CTGCATGATTAATAC STM3598 3771035 - 3769992 - | putative L-asparaginase TERM 4986 3771017 - 3771034 + g 70 -2.8 -4.75472 | opp_overlap 3771006 GCAACACGGTGGCCA TGAAAA CTCTAA TTTTCA TTTTCTTCCTCTGAA STM3599 3772413 - 3771094 - | anaerobic C4-dicarboxylate transporter TERM 4987 3771279 - 3771268 - G 71 -7.2 -3.94772 | opp_overlap 3771276, overlap 3771266 CGGAATAAAGAAATA GCCG TTAA CGGC AGGCCAGGAGCCGAT STM3600 3773312 - 3772467 - | putative sugar kinase TERM 4988 3772551 - 3772561 + g 78 -6.8 -4.56969 | overlap 3772550 GCCCTGCCGCATGGC GCGT AAC ACGC TTTCTTTATCGGGTT STM3601 3774353 - 3773376 - | putative phosphosugar isomerase TERM 4989 3774495 - 3774471 - R 100 -11.5 -6.02546 | GGAAACCAAAAAAAA TCGGGATCC GCGATCT GGATCCCGA TTCAGCCTGCTCTTC TERM 4990 3774532 - 3774545 + r 72 -6.7 -4.36914 | opp_overlap 3774532 GTAATGCTGACATCA TACGG TAAA CCGTA TTTTATCGCCGACAA STM3602 3775248 - 3774529 - | putative regulatory protein TERM 4991 3774580 - 3774591 + g 71 -5.8 -4.33819 | opp_overlap 3774565 3774576 3774580 CTGTTGCGAAACGCA GGAG AGTT CTCC TTTGTTATCAATCAT TERM 4992 3775193 - 3775223 + g 84 -9 -4.35518 | overlap 3775190 3775179 GCCTCTTTTAAGGCG GCTTCAAGCTGCTT ATA AAGCGGTTTGGCGC TTTTACTGTCGGGTT treF 3775574 - 3777223 + | trehalase TERM 4993 3777256 - 3777277 + T 88 -5.9 -5.60689 | opp_overlap 3777256 GAATCGCATCATAAA TGGCTGA CTGAATTT TCAGCCA TTTTTTATTGTCTGC STM3604 3778825 - 3777236 - | putative inner membrane protein TERM 4994 3778863 - 3778841 - H 84 -8.4 -4.57073 | opp_overlap 3778844 3778854, overlap 3778844 TATCTTCCCTAAAAA GACGATCCCG CGA CGAGATCTTC GTTTTCTTTTAATTA TERM 4995 3778854 - 3778864 + H 75 -3.2 -5.19998 | opp_overlap 3778844 3778841, overlap 3778844 AAGACGATCCCGCGA CGAG ATC TTCG TTTTCTTTTAATTAT TERM 4996 3779371 - 3779398 + G 100 -12.1 -5.38249 | overlap 3779351 GCGAAACGCTTATTG CGCTGATGTTC AGCATC GGACATCAGCG TTTTTTATCATTAAT STM3605 3779106 - 3779462 + | putative phage endolysin yhjB 3780070 - 3779468 - | putative transcriptional regulator TERM 4997 3779926 - 3779940 + g 71 -4.2 -4.64992 | overlap 3779926 3779925 TATCCAGCATGACCA GCGC ATCCGGC GCGC TTTCTATTTTTTGCC yhjC 3780701 - 3781600 + | putative transcriptional regulator yhjD 3781673 - 3782701 + | putative tRNA-processing ribonuclease TERM 4998 3783420 - 3783446 + G 74 -10 -3.64822 | GACGATAGGTATTTT CGCGCCGCTGCT GCT GGCGCTGGCGCG TTTCGGTCAGGGACT yhjE 3783052 - 3784374 + | putative transport protein TERM 4999 3784376 - 3784406 + T 79 -9.7 -3.68244 | gap 1, opp_overlap 3784377, overlap 3784377 3784379 ATCAGGCGTTGTAAT AG-GGCGCCGGATG GCAT CATCCGGCGCTACG TTTCACGTTACTGCT TERM 5000 3784404 - 3784377 - T 75 -11.2 -3.02144 | opp_overlap 3784377 3784376 3784379 TCAGGCGTTGTAATA GGGCGCCGGATG GCAT CATCCGGCGCTA CGTTTCACGTTACTG TERM 5001 3784377 - 3784405 + T 82 -13.2 -2.80464 | gap 1, opp_overlap 3784377, overlap 3784376 3784379 TCAGGCGTTGTAATA G-GGCGCCGGATG GCAT CATCCGGCGCTAC GTTTCACGTTACTGC TERM 5002 3784379 - 3784402 + T 100 -18.2 -2.66326 | opp_overlap 3784377, overlap 3784377 3784376 AGGCGTTGTAATAGG GCGCCGGATG GCAT CATCCGGCGC TACGTTTCACGTTAC yhjG 3786474 - 3784414 - | putative inner membrane protein TERM 5003 3784545 - 3784576 + g 95 -10.1 -4.70659 | gap 1, opp_overlap 3784548 CCGCGCCGCGCGCAA TCAGCGGGCCGGGC TTGAC GCCC-GCCTGCGGA TTTTTAAATGTCCCG yhjH 3787351 - 3786584 - | EAL domain-containing protein TERM 5004 3787652 - 3787634 - g 73 -8.8 -3.86015 | opp_overlap 3787636 3787640, overlap 3787635 GAGCTGTCGCAGAAA GGCGCTGA TGT TCAGCGCG GCTTCGGCGGCGACA TERM 5005 3787651 - 3787635 - g 75 -12.3 -2.91395 | opp_overlap 3787636 3787640, overlap 3787634 AGCTGTCGCAGAAAG GCGCTGA TGT TCAGCGC GGCTTCGGCGGCGAC kdgK 3787580 - 3788509 + | ketodeoxygluconokinase yhjJ 3790050 - 3788563 - | putative Zn-dependent peptidase TERM 5006 3790105 - 3790085 - R 78 -5.3 -5.06414 | TCCTGGTAATAAAAA GACAGCCCC GGC AGGGATGCC TGAATATGACGTAAA TERM 5007 3790257 - 3790228 - R 75 -10 -3.59315 | overlap 3790230 TCAATTATGCGCAAA CACCCGCAGTCC TGGAAG GGACTACGGGCA TAAGTGGCGAGATTA TERM 5008 3790255 - 3790230 - R 85 -12.6 -3.37259 | overlap 3790228 AATTATGCGCAAACA CCCGCAGTCC TGGAAG GGACTACGGG CATAAGTGGCGAGAT dctA 3791556 - 3790270 - | C4-dicarboxylate transporter DctA TERM 5009 3791692 - 3791709 + r 79 -2.6 -5.28315 | overlap 3791691 3791694 AAAAAGTTTGAGCTG GCTCGC ACAAGC GCGACC TTTTTTAACTTTTGT yhjK 3793687 - 3791714 - | putative phosphodiesterase TERM 5010 3792983 - 3793005 + g 86 -12 -3.79519 | opp_overlap 3792982 3792983 GGGCAGCTCGGAAAC CGGAAAACGC ATC GCGTTGTCCG TTTGCTCCTCGCGTT TERM 5011 3793005 - 3792983 - G 72 -12 -2.73124 | opp_overlap 3792983, overlap 3792982 GGGCAGCTCGGAAAC CGGAAAACGC ATC GCGTTGTCCG TTTGCTCCTCGCGTT TERM 5012 3793694 - 3793654 - G 81 -2 -5.28983 | gap 1, overlap 3793663 TGCAAAAGACAAAAA CAAACATCATGACAACGGC CGCA ACCATTGCCATC-TGTTTA ATTGTTAACGAGCGG yhjL 3797436 - 3793894 - | cellulose synthase subunit BcsC TERM 5013 3795510 - 3795494 - G 71 -10.8 -3.30338 | opp_overlap 3795494 3795493 AGAACGGCGTCATAA GCGGCG CGGGC CGCCGC ATTATCGCCACGCTG STM3617 3798527 - 3797418 - | endo-1,4-D-glucanase TERM 5014 3797679 - 3797691 + g 81 -6.9 -4.81083 | opp_overlap 3797668 GACATCCACTTTCTC CGGTG GAA CGCCG TTTTTCATCGTTAAC TERM 5015 3798010 - 3798022 + g 80 -9.1 -4.09685 | CGCCAGCTATTCGCC TCGGC AAA GCCGA TTTTGCCAGGTAGCA yhjN 3800831 - 3798531 - | cellulose synthase regulator protein bcsA 3803466 - 3800842 - | cellulose synthase catalytic subunit TERM 5016 3802192 - 3802181 - G 75 -5.8 -4.65933 | opp_overlap 3802180 GATCCGCAAAAGAAA GTGG CGTC CCAC ATATCGTTACCGTCC TERM 5017 3802313 - 3802295 - G 77 -7.4 -4.30719 | TCCGGGGAGAAGAAA TGATGCGG CGT CTGCATCA TCGCCAGCTGTTTTT TERM 5018 3803386 - 3803374 - G 74 -10.5 -3.53224 | GAGCGCTGCGCTAAA CGGCG ACG CGCCG TGGCGGCGGTAACCC yhjQ 3804215 - 3803463 - | cell division protein yhjR 3804419 - 3804216 - | putative cytoplasmic protein TERM 5019 3805147 - 3805165 + G 73 -5.2 -4.62069 | overlap 3805148 CAGTCCTCGTTGTTG ATGGGCGA GTA TCGCTCAC TTTTTGGCCTCGCCA TERM 5020 3805251 - 3805240 - g 91 -7.2 -4.8622 | overlap 3805241 3805242 TGGTGTAACGAAAAA GGCG TCAG CGCC CGACAGCAGTTATTG TERM 5021 3805932 - 3805950 + G 76 -3.1 -5.01535 | gap 1, opp_overlap 3805910, overlap 3805926 TATTATGACCATCGG CGGCAACC GTCT GGT-GCTG TTTTTATCATTCTGC yhjS 3804664 - 3806235 + | putative cytoplasmic protein yhjT 3806232 - 3806423 + | putative inner membrane protein TERM 5022 3807485 - 3807436 - g 88 -11.3 -4.10007 | opp_overlap 3807436 3807480, overlap 3807437 AGAAGTTCGCGAAAA CGGCGGTATGCAGAGCGAACTGA TGAA CCAGTCCGGCCTGCCAACCGCCC TGCTGTCATTCGACG TERM 5023 3807484 - 3807437 - g 91 -14.8 -3.05522 | opp_overlap 3807436 3807480, overlap 3807436 GAAGTTCGCGAAAAC GGCGGTATGCAGAGCGAACTGA TGAA CCAGTCCGGCCTGCCAACCGCC CTGCTGTCATTCGAC TERM 5024 3807661 - 3807639 - g 81 -8.5 -4.25104 | gap 1, opp_overlap 3807624, overlap 3807654 CCGGCGTCAGCAAAA CG-GCGGATT ATAA AATCCGCGCG CAGAAACTGTTCGAT yhjU 3806420 - 3808099 + | putative inner membrane protein TERM 5025 3808140 - 3808101 - f 100 -18.6 -3.73775 | opp_overlap 3808109 3808126, overlap 3808109 CTTACCCGCAGTAAA CCGAAAAAGGCCGCAAGG TTTC CCCTGCGGCCTGGTTCGG GCGCATGTTGCCATT TERM 5026 3808132 - 3808109 - f 100 -16 -4.82855 | opp_overlap 3808109 3808126, overlap 3808101 CAGTAAACCGAAAAA GGCCGCAAGG TTTC CCCTGCGGCC TGGTTCGGGCGCATG TERM 5027 3808109 - 3808132 + F 83 -13.8 -2.71144 | opp_overlap 3808101 3808109, overlap 3808126 CAGTAAACCGAAAAA GGCCGCAAGG TTTC CCCTGCGGCC TGGTTCGGGCGCATG TERM 5028 3808353 - 3808395 + F 100 -12.7 -4.60797 | gap 1, opp_overlap 3808352 TTGGGTTCAAGTTAG CCCCCGTCAGGTTGCCAGGT TTAT ACCAGTCAACGTG-CGGGGG TTTTCTCTATCCAGC STM3624A 3808673 - 3808813 + | cystathionine gamma-synthase TERM 5029 3808878 - 3808912 + F 71 -7.2 -4.07568 | opp_overlap 3808866 3808871 GCACTATAGCCTGGT TATAGGCAGCATTCTT TAT GAGAGAGCTGCGTATA TTTTGGGCAGGGGGC TERM 5030 3809337 - 3809355 + G 75 -11 -3.37755 | opp_overlap 3809336 3809335, overlap 3809335 CCTATATCAAAACCT TCGGCCTT ACT GAGGCCGA TCTTTCGCAGTCTAT yhjV 3808931 - 3810229 + | putative transport protein dppF 3811343 - 3810330 - | dipeptide transporter ATP-binding subunit dppD 3812323 - 3811340 - | dipeptide transporter ATP-binding subunit dppC 3813236 - 3812334 - | dipeptide transporter TERM 5031 3812754 - 3812730 - G 71 -8.5 -3.87815 | CGGCAGCGCCACAAA CGTCAACGCCA GCG CAGCGTTGCCG ATGGAGGGGCCGAAG dppB 3814265 - 3813246 - | dipeptide transporter permease DppB TERM 5032 3814403 - 3814415 + r 80 -6.9 -4.56133 | GCCTACACAACACCG GGGCG CAG CGCTC TTTTAATTATTCGAC dppA 3816029 - 3814422 - | dipeptide transport protein TERM 5033 3815175 - 3815187 + g 90 -6.3 -5.23765 | overlap 3815168 CAGACCGGCCTGCTC CATCA GGT TGATG TTTTTATCTTCTTTC TERM 5034 3815637 - 3815649 + g 74 -3.3 -4.84359 | AGACACTTTATGGTA CGGGT TCT GCTCG TTTTTCTGCCGGTCA TERM 5035 3815801 - 3815824 + g 84 -8.8 -4.27316 | opp_overlap 3815798 3815800 ACTTCTCAGCAAGAC CCGGGATCAC TTCC GTGGTGCCGG TTTTGAATTCAACCA TERM 5036 3816570 - 3816550 - R 95 -12.6 -4.00411 | CAAAATTGTAAATAA GTAGGCCG TCGTG CGGCCTAC CGCGATCACAAAAAC STM3631 3817910 - 3816585 - | putative xanthine permease TERM 5037 3817213 - 3817202 - G 83 -5.8 -4.84527 | CGGAGAGATCAAAAA TCGG CCAG CCGA ACGGCAAAAGCTGTG TERM 5038 3817964 - 3817939 - R 100 -11.1 -5.69023 | opp_overlap 3817937 3817939 3817940 3817942, overlap 3817942 AAAACATCAAAAAAA TAACCGCCAGC GCGG GCTGGCGGTCT GTATTATTTCAACCA TERM 5039 3817939 - 3817965 + r 75 -9.5 -3.54488 | gap 1, opp_overlap 3817939 3817942, overlap 3817937 3817940 3817942 AAAACATCAAAAAAA TA-ACCGCCAGC GCGG GCTGGCGGTCTG TATTATTTCAACCAA TERM 5040 3817940 - 3817963 + r 85 -12.4 -3.34652 | opp_overlap 3817939 3817942, overlap 3817939 3817937 3817942 AAACATCAAAAAAAT AACCGCCAGC GCGG GCTGGCGGTC TGTATTATTTCAACC TERM 5041 3817942 - 3817961 + r 100 -15 -3.23555 | opp_overlap 3817942 3817939, overlap 3817940 3817939 3817937 ACATCAAAAAAATAA CCGCCAGC GCGG GCTGGCGG TCTGTATTATTTCAA TERM 5042 3817961 - 3817942 - R 100 -15 -4.86226 | opp_overlap 3817940 3817939 3817937 3817942, overlap 3817939 ACATCAAAAAAATAA CCGCCAGC GCGG GCTGGCGG TCTGTATTATTTCAA STM3632 3819092 - 3817968 - | hypothetical protein TERM 5043 3818967 - 3818980 + g 71 -9.5 -3.53012 | opp_overlap 3818966 3818967 GTCCACCAGGTAAAC CCGCC CTTC GGCGG TTTGCGGCGCAAAAA TERM 5044 3820008 - 3820020 + G 74 -10.5 -3.53012 | ATACCTTTGCCAGCG GCGCG GTA CGCGC TTTCCAGGAACAGGC STM3633 3819242 - 3820249 + | putative regulatory protein TERM 5045 3820272 - 3820290 + T 74 -10.2 -3.14211 | overlap 3820289 TGACTCGCCACTACG TGGCTCGC CCT GCGGGCCG TTGCTGACGCAACGT TERM 5046 3820289 - 3820304 + T 72 -9 -3.55368 | overlap 3820272 GCTCGCCCTGCGGGC CGTTGC TGAC GCAACG TTCTCTCGCTTCGCT TERM 5047 3820398 - 3820380 - T 100 -14.6 -5.76633 | opp_overlap 3820380 TCAGATACAAAAAAA CCCTGCTC ATT GAGCAGGG TTTCTGAATTTGGTC TERM 5048 3820380 - 3820398 + T 100 -14.6 -4.03204 | opp_overlap 3820380 TCAGATACAAAAAAA CCCTGCTC ATT GAGCAGGG TTTCTGAATTTGGTC yhjW 3822267 - 3820576 - | phosphoethanolamine transferase TERM 5049 3822477 - 3822460 - R 100 -12.7 -4.49644 | opp_overlap 3822471 ACTAAAAATGGAAAA GGGCCAG CGAA CTGGCCC TCAGTGATTATTCGT lpfE 3823012 - 3822485 - | long polar fimbrial minor protein lpfD 3824097 - 3823018 - | long polar fimbrial protein lpfC 3826643 - 3824115 - | long polar fimbrial outer membrane usher protein lpfB 3827364 - 3826666 - | long polar fimbrial chaperone precursor TERM 5050 3826785 - 3826799 + g 80 -4.2 -5.1287 | overlap 3826787 TCAATGAGCCTTTTG CCGGAA CCA TTCCCG TTTTTTCAATATCAC TERM 5051 3826973 - 3826993 + g 86 -7.5 -4.74103 | AGTTTTAAGCGGGTA CGTACGGCG ATC TGCAGTACG TTTTTAGCTTCCGCG TERM 5052 3827396 - 3827418 + r 93 -14.2 -3.60094 | opp_overlap 3827396, overlap 3827390 CTCCGCTGGAAAAAA TGGCAACGGG ATT TCCGTTGCCA TTATGATTGTCTGTA TERM 5053 3827418 - 3827396 - R 100 -13.5 -5.00616 | opp_overlap 3827390 3827396 CTCCGCTGGAAAAAA TGGCAACGG GATTT CCGTTGCCA TTATGATTGTCTGTA lpfA 3827985 - 3827449 - | long polar fimbrial protein A precursor TERM 5054 3827482 - 3827508 + g 87 -8 -4.63932 | overlap 3827478 3827484 GAAGTCCACTTCTGC GTTACCGTAACC AGT GGTTACAGTATC TTTTGTTGCAACGTA TERM 5055 3827484 - 3827506 + g 76 -9.2 -3.93367 | overlap 3827478 3827482 AGTCCACTTCTGCGT TACCGTAACC AGT GGTTACAGTA TCTTTTGTTGCAACG TERM 5056 3828310 - 3828292 - R 100 -5.9 -6.23545 | overlap 3828294 GCTAAATAAAAAAAA GGGCACC AAATG GGTGCGC TGTACGCTTGGTGTT yhjY 3829195 - 3828491 - | putative lipase TERM 5057 3829153 - 3829130 - G 100 -8 -5.28176 | overlap 3829133 3829144 3829145 GGTATTGATAAAAAA CGAGCAGGCC ATAA GGCCCGCCAG ACAACGCAATGTCCG TERM 5058 3829150 - 3829133 - G 73 -10.5 -3.45403 | overlap 3829130 3829144 3829145 ATTGATAAAAAACGA GCAGGCC ATAA GGCCCGC CAGACAACGCAATGT TERM 5059 3829674 - 3829692 + G 78 -6.6 -4.59027 | opp_overlap 3829675, overlap 3829675 TTGCGATGGAGCAAA ACGGCGAG TCT TTCGCCGA TTTTGTCTGGTCATT TERM 5060 3829691 - 3829675 - g 84 -9.4 -4.2828 | opp_overlap 3829674 3829675 TGCGATGGAGCAAAA CGGCGA GTCTT TCGCCG ATTTTGTCTGGTCAT TERM 5061 3829675 - 3829691 + G 70 -10.1 -3.34332 | opp_overlap 3829675, overlap 3829674 TGCGATGGAGCAAAA CGGCGAG TCT TTCGCCG ATTTTGTCTGGTCAT tag 3829352 - 3829933 + | 3-methyl-adenine DNA glycosylase I yiaC 3829911 - 3830351 + | hypothetical protein bisC 3832653 - 3830320 - | biotin sulfoxide reductase yiaD 3832806 - 3833468 + | putative outer membrane lipoprotein TERM 5062 3833643 - 3833665 + F 77 -6.9 -4.54727 | TAATAAGCCTGTTCC GGTTGGCGC ATGCC GCGCTTACC TTTTGATTTACGGAG TERM 5063 3833824 - 3833803 - g 81 -12.9 -3.0634 | opp_overlap 3833797 3833809, overlap 3833790 AACGGTAGCGCAACA CGCGCAGGC ATTT GCCAGCGCG CAAGGCCTTCTGGGC TERM 5064 3833896 - 3833877 - g 82 -5.6 -5.00616 | gap 1, overlap 3833878 CGCTGCTGGAAAAAA TGCCG-GCG CTA CGCGCGGCG TCAACCATCTCGGTG yiaE 3833687 - 3834661 + | 2-hydroxyacid dehydrogenase yiaF 3835421 - 3834711 - | putative outer membrane lipoprotein TERM 5065 3834933 - 3834905 - G 70 -9.6 -3.34517 | gap 1, opp_overlap 3834910, overlap 3834903 ACTGCTGCGTAAAGA TCTGC-GCCGCCG GGAT CAGCGGCTGCAAA GCATCTGCCGGCACG TERM 5066 3835635 - 3835613 - H 79 -4.1 -5.252 | gap 1, opp_overlap 3835626 CACTGCGATAAAAAA CGC-GGCAAG AAAG CTTTCCAGCG GGGAGTGTAATATTT yiaG 3835860 - 3836150 + | putative transcriptional regulator TERM 5067 3836144 - 3836160 + F 72 -5.1 -4.55887 | opp_overlap 3836143 AAGTAAGCAATTGAT GGAGTAA TTT TTACCCC TTTCTGTTTTTAACG TERM 5068 3836174 - 3836192 + F 87 -10.3 -4.07687 | CCTTTCTGTTTTTAA CGGTCCT GCGTA AGGACCG TTTTCCCCGCCCGAT cspA 3836439 - 3836651 + | major cold shock protein TERM 5069 3836676 - 3836695 + F 100 -11.4 -6.09888 | GCTCAGCATTTTGAA TCCCTGCC TGAT GGCGGGGA TTTTTTTTATTCCAA STM3650 3836825 - 3837364 + | hypothetical protein TERM 5070 3837398 - 3837370 - T 100 -8.9 -5.44721 | opp_overlap 3837372, overlap 3837371 ATTACGTTAAAAAAA TGCCCGATAAC ATAATGG GTTATCGGGCC TATAAAACGCCAACA TERM 5071 3837397 - 3837371 - T 95 -12.4 -3.85748 | opp_overlap 3837372, overlap 3837370 TTACGTTAAAAAAAT GCCCGATAAC ATAATGG GTTATCGGGC CTATAAAACGCCAAC TERM 5072 3837528 - 3837550 + T 93 -7 -5.72622 | opp_overlap 3837528 GAGGCATCAGCGAAA GAGTCCATTT AAT ACATGGGCTC TTTTTTGTTTCTGGC STM3651 3838221 - 3837736 - | putative acetyltransferase STM3652 3838496 - 3838209 - | putative cytoplasmic protein STM3653 3839141 - 3838674 - | putative acetyltransferase TERM 5073 3839725 - 3839752 + r 77 -7.1 -4.46112 | opp_overlap 3839714 3839731, overlap 3839731 ACTATTTATGTTATA AAAAAACCTGC CCGAGA GCAGGTTTTTG TTTATTTAACTGAAC TERM 5074 3839731 - 3839746 + r 91 -6.1 -5.5454 | opp_overlap 3839731, overlap 3839725 TATGTTATAAAAAAA CCTGC CCGAGA GCAGG TTTTTGTTTATTTAA TERM 5075 3839746 - 3839731 - R 91 -6.8 -5.626 | opp_overlap 3839731 3839725 TATGTTATAAAAAAA CCTGCC CGAG AGCAGG TTTTTGTTTATTTAA glyS 3841839 - 3839770 - | glycyl-tRNA synthetase subunit beta TERM 5076 3841280 - 3841270 - G 71 -8.2 -3.91897 | CGGCTCACCCATAAA GCGG TGG CCGC GAATGACGCGGTCAG glyQ 3842760 - 3841849 - | glycyl-tRNA synthetase subunit alpha TERM 5077 3842026 - 3842076 + g 74 -4.5 -4.78107 | gap 1, overlap 3842055 3842058 TTTCAGAATACGCTC GTAGGCCGGCAGCGGCAGCGGGTT TTCC AGCGC-CAGCAGCTGCTGGGCTTC TTTTTCATACTGCTC TERM 5078 3842055 - 3842073 + g 75 -6.7 -4.49314 | gap 1, overlap 3842026 3842058 GCAGCGGGTTTTCCA GCGCCAGC AGCT GCTGG-GC TTCTTTTTCATACTG TERM 5079 3842947 - 3842923 - R 82 -7.1 -4.7889 | AGAAAGATGTAAAAA CTGCCCATCTG CAT CAAAAGAGCAG ACAAAACTCTCTTTA STM3657 3843201 - 3842899 - | putative outer membrane lipoprotein TERM 5080 3843574 - 3843590 + G 80 -4.4 -5.1287 | gap 1, overlap 3843572 TTTTTTGGCGAGCGC TG-CGCG CAAC CGCGGCA TTTTTTACGTATCGC yiaH 3843367 - 3844362 + | putative inner membrane protein TERM 5081 3844370 - 3844387 + T 71 -9.9 -3.22774 | opp_overlap 3844364 3844370 TTAGCTAAACGACAA TGATGGC TCCG GCCATCA TTCATCATCACTGTA TERM 5082 3844387 - 3844370 - T 75 -9.9 -3.61609 | opp_overlap 3844370, overlap 3844364 TTAGCTAAACGACAA TGATGGC TCCG GCCATCA TTCATCATCACTGTA yiaB 3844738 - 3844385 - | putative inner membrane protein TERM 5083 3844880 - 3844905 + r 82 -12 -3.45054 | opp_overlap 3844880 AATATTTACGGGAAA TGCCTTTCAG CCAAAA CTGAAAGGCA TTCTGACTTATGACA TERM 5084 3844905 - 3844880 - R 88 -12.7 -3.61922 | opp_overlap 3844880 AATATTTACGGGAAA TGCCTTTCAGC CAAA ACTGAAAGGCA TTCTGACTTATGACA xylB 3846367 - 3844913 - | xylulokinase TERM 5085 3845587 - 3845573 - G 82 -11.4 -3.91897 | CGGTTTACTCAGAAA GCCGTC GCT GACGGC AAAATAGACGCCCGA xylA 3847789 - 3846467 - | xylose isomerase xylR 3848152 - 3849330 + | xylose operon regulatory protein bax 3850215 - 3849391 - | hypothetical protein TERM 5086 3850766 - 3850778 + G 75 -6.9 -4.42806 | CCTGCGAAGGCGCGC CGCCG CAA TGGCG TTTGTTTAAAGATGG malS 3850531 - 3852558 + | periplasmic alpha-amylase precursor TERM 5087 3852922 - 3852910 - g 80 -10.5 -3.91858 | opp_overlap 3852914 CAGATATGGTAGAAA GCGGC AAA GCCGC TGATGCGCTTTGTAA avtA 3852732 - 3853982 + | valine--pyruvate transaminase TERM 5088 3854071 - 3854040 - T 78 -12.2 -2.50252 | overlap 3854039 3854035 AGGTTGAGAATAGAG GCGCTGGCGCTGCA CGTG TGCTGCGTCAACGC ACTGTAACGCACTGG ysaA 3854492 - 3854019 - | putative oxidoreductase yiaJ 3855409 - 3854609 - | transcriptional repressor yiaK 3855639 - 3856637 + | 2,3-diketo-L-gulonate reductase yiaL 3856649 - 3857113 + | putative cytoplasmic protein TERM 5089 3857258 - 3857270 + G 70 -9.1 -3.67052 | CTCCGGATATCCGGG GGCTG GAG CAGCC TTGTCTTGAACATCT TERM 5090 3857290 - 3857307 + G 70 -9.1 -3.62597 | opp_overlap 3857283 CTTGAACATCTTCAC CCGCTCG GCGA CGAGTGG TTATTGCGCCATACA TERM 5091 3857370 - 3857390 + G 86 -9.7 -4.2803 | AATGGAAACCATGCG CCGCCGT AGCGAAA ACGGCGG TTTTGGATTAGCGTC STM3670 3857137 - 3858069 + | putative chemotaxis protein yiaM 3858208 - 3858681 + | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM yiaN 3858684 - 3859961 + | hypothetical protein yiaO 3859973 - 3860959 + | putative periplasmic dicarboxylate-binding protein TERM 5092 3861409 - 3861457 + G 91 -17 -2.71144 | opp_overlap 3861400 3861422, overlap 3861422 GAATGAGCCGCAGCG CTACGCGCAGATAGGC-TGCGTCA TGA TGACGCATGACTATCTGCGC-TGG TGCTTAACCGGCGTG TERM 5093 3861940 - 3861971 + G 100 -6.5 -5.94713 | gap 1, opp_overlap 3861937 3861935 3861934 3861959 CGAGATCAATCAGGC GGTCGCCAGCCTGC CGAAA GCCGG-TAGCGACC TTTTTTTTCTGCCGT lyxK 3860963 - 3862459 + | L-xylulose kinase sgbH 3862456 - 3863118 + | 3-keto-L-gulonate-6-phosphate decarboxylase sgbU 3863111 - 3863971 + | putative L-xylulose 5-phosphate 3-epimerase sgbE 3863965 - 3864660 + | L-ribulose-5-phosphate 4-epimerase STM3678 3865636 - 3864821 - | putative regulatory protein TERM 5094 3865228 - 3865253 + g 71 -6 -4.33105 | opp_overlap 3865229, overlap 3865229 3865231 TCAGCAGCACGATGA ACTCCAGCGC CGGGCT GCGCTGGTGC TTTTCCTGCTCGTTC TERM 5095 3865297 - 3865285 - G 75 -6.2 -4.60924 | overlap 3865286 TAAACTGGCGAAAAA GCGC AATCA GCGC CTGCGGATCGGCAAC TERM 5096 3865339 - 3865369 + g 74 -10.3 -3.60296 | opp_overlap 3865338 3865336 3865339 GCGGCACGGAAAGAT GCGTCAGCCAGCG CGGGT CGCTGTCCGGCGC TTTGACCTCAAAATG STM3679 3865900 - 3867855 + | putative cytoplasmic protein aldB 3869511 - 3867973 - | aldehyde dehydrogenase B STM3681 3869680 - 3870561 + | putative transcriptional regulator TERM 5097 3870788 - 3870762 - T 100 -8 -5.69262 | opp_overlap 3870762 CCAGAAAAATAAAAA GCACATCTGG TTCATTT CCTGATGTGC TTTTTATAAAGCAAC TERM 5098 3870762 - 3870788 + T 84 -8 -4.82901 | opp_overlap 3870762 CCAGAAAAATAAAAA GCACATCTGG TTCATTT CCTGATGTGC TTTTTATAAAGCAAC selB 3872696 - 3870846 - | selenocysteinyl-tRNA-specific translation factor TERM 5099 3871049 - 3871070 + g 74 -7.3 -4.13945 | CGAAAGCGACAATCC GATCGTTAC GATA GTACCGATC TTTTACGATCGCGGT selA 3874084 - 3872693 - | selenocysteine synthase yibF 3874791 - 3874183 - | glutathione S-transferase TERM 5100 3875005 - 3874990 - H 86 -4 -5.50723 | GCACCAAAATAAAAA TGTGAA ATAT CTCACA TAAAATGGCCTTTTA mtlA 3875267 - 3877183 + | mannitol-specific enzyme IIABC component TERM 5101 3877192 - 3877178 - f 85 -7.2 -5.08824 | CTGGCAGGTAAAAAA GCTTAA CAG TTAAGC ATCCCCAAAATAGTT TERM 5102 3877785 - 3877771 - g 74 -10 -3.63744 | overlap 3877769 TCGCCTGTGAAAATA TGGTGC GCG GCACCA CGCAGCTGAAAGGCC TERM 5103 3878471 - 3878460 - g 86 -7.2 -4.68593 | overlap 3878461 CTGATTACCGAAAAA GGCC CGCA GGCC GCGCTGGCGCAAATT mtlD 3877404 - 3878552 + | mannitol-1-phosphate 5-dehydrogenase TERM 5104 3878585 - 3878560 - g 75 -11.1 -3.41053 | overlap 3878553 CCAAATGACGCAGAA TCCGGCGCAGG TTAG CCTGCGCCCAA ATAACAGATTGTCAG mtlR 3878549 - 3879139 + | mannitol repressor protein STM3688 3879358 - 3879149 - | putative cytoplasmic protein yibL 3879649 - 3880011 + | hypothetical protein TERM 5105 3880744 - 3880725 - g 76 -3.4 -4.99056 | opp_overlap 3880735, overlap 3880735 CAACACAACCAAAAA GGTCACCG AAGT CGTTGGCC GCGTTGAACGCAAAC TERM 5106 3880989 - 3880960 - g 81 -3.5 -5.14563 | gap 1, overlap 3880961 TGGGGTACGAAAAAA CCTTCCGAGGCAAA AGA TCTGCCTCGCT-GG AAACAACTCCTGCTC TERM 5107 3881084 - 3881074 - g 83 -8.2 -4.43012 | ACGCTAACATTAAAA GGCG TAT CGCC CAATAATCTTAAGTA STM3690 3880501 - 3881184 + | putative inner membrane lipoprotein TERM 5108 3882407 - 3882376 - g 79 -7.4 -4.46615 | overlap 3882355 3882378 CAGCATCAACCAAAA CACTGCCGATATTA CCGC TAATACCGACAGCA TTAACCAGAACACAA TERM 5109 3882405 - 3882378 - g 76 -10 -3.83437 | overlap 3882355 3882376 GCATCAACCAAAACA CTGCCGATATTA CCGC TAATACCGACAG CATTAACCAGAACAC STM3691 3881228 - 3885613 + | putative inner membrane protein TERM 5110 3885663 - 3885641 - f 100 -16.4 -3.83205 | opp_overlap 3885641 ACTCCCGACATCAAA GGCAATGGCA TAA TGCCATTGCC TTTTCACTTCCCTTT TERM 5111 3885641 - 3885663 + F 100 -16.4 -4.30448 | opp_overlap 3885641 ACTCCCGACATCAAA GGCAATGGCA TAA TGCCATTGCC TTTTCACTTCCCTTT TERM 5112 3886430 - 3886403 - g 74 -10.6 -3.59979 | opp_overlap 3886429 GTGCCTGATTGTAAA CACCGCGCCA GTCGCCTT TGGCGCGATG GGGATCCCGATTCTG lldP 3885912 - 3887567 + | L-lactate permease lldR 3887564 - 3888340 + | DNA-binding transcriptional repressor LldR lldD 3888337 - 3889527 + | L-lactate dehydrogenase yibK 3889591 - 3890064 + | putative tRNA/rRNA methyltransferase YibK STM3696 3891136 - 3890132 - | putative transcriptional regulator TERM 5113 3890613 - 3890626 + g 72 -3.8 -4.72272 | AGAAGATACTCCCCC GTCG CCTGCC CGAC TTTTTCATGGGAAAA STM3697 3891455 - 3892651 + | putative mandelate racemase TERM 5114 3892659 - 3892677 + F 79 -11.7 -3.1352 | overlap 3892655 GCCCTTAACCCGACT GGCGGGA ATCCG TCCCGCC TCTCTTACCTTACAG TERM 5115 3892757 - 3892742 - g 71 -4.6 -4.57503 | overlap 3892743 GAACACAATAATAAA GCGCAC AAAA GTGCGT CATACCATTCTTATA STM3698 3892725 - 3894035 + | putative permease TERM 5116 3894062 - 3894095 + T 100 -8.3 -5.32944 | gap 2 GCGAATTCTTCGCTC CGCTGTTCCG--GGA TTGCAC TCCATCGGAACAGCG TTTTTTAGTTGTACC cysE 3894939 - 3894118 - | serine acetyltransferase TERM 5117 3894964 - 3894993 + r 84 -10.8 -3.86194 | gap 1, opp_overlap 3894964 3894967 CAGACGGGCAGAAAA CGA-CCAACCCGT TCTGT GCGGGTTGGGTCG TTTATGCAAACAGTT TERM 5118 3894993 - 3894964 - R 90 -10.1 -4.39426 | gap 1, opp_overlap 3894964, overlap 3894967 CAGACGGGCAGAAAA CGA-CCAACCCG TTCTGTG CGGGTTGGGTCG TTTATGCAAACAGTT TERM 5119 3894989 - 3894967 - R 74 -10.6 -3.17598 | opp_overlap 3894964, overlap 3894964 ACGGGCAGAAAACGA CCAACCCG TTCTGTG CGGGTTGG GTCGTTTATGCAAAC gpsA 3896036 - 3895017 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 5120 3895328 - 3895303 - G 71 -9.7 -3.56821 | gap 1, overlap 3895320 ACCAGATCGCCTAAA CCCGCCATCCCC ATA AAGG-TGGCGGG ATCGGCACCAAGCGC TERM 5121 3896034 - 3896050 + g 76 -10.9 -3.69283 | overlap 3896045 CGCATTACTTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 3896503 - 3896036 - | preprotein translocase subunit SecB grxC 3896798 - 3896547 - | glutaredoxin 3 yibN 3897316 - 3896885 - | putative rhodanese-like sulfurtransferase TERM 5122 3897056 - 3897070 + g 83 -10 -4.08485 | GTGCTTTTCCAGTTC GCCAAC ATT GTTGGC TTTGATTTCGCTCGG TERM 5123 3898082 - 3898109 + G 71 -11.2 -2.95476 | gap 1, opp_overlap 3898070 3898080 3898081 3898099, overlap 3898099 ATTCGAAGACAAATT CGCCGCGCTGGGC AAA GGCC-GCGTGGCG TCTATCGTCGGTCGT pmgI 3897564 - 3899108 + | phosphoglyceromutase TERM 5124 3899190 - 3899216 + G 100 -14.5 -3.81022 | overlap 3899211 GTCAGGCCTTTGTTC TACGCCAGCGT ACTTA GCGCTGGCGTA TTGTTGTGCGCCTTT TERM 5125 3900316 - 3900339 + G 73 -5.9 -4.43877 | opp_overlap 3900294 CCCTTGTGGGCAGTA GCGGCGGTC AGGGCA GACCCTCGC TTTATTTCGAAATTC yibP 3899118 - 3900401 + | hypothetical protein TERM 5126 3900537 - 3900527 - g 74 -6.8 -4.2349 | overlap 3900530 CCCGCACACGGAAAA CCAG GTT CTGG CGCTGCCGCCAAACA TERM 5127 3901233 - 3901221 - g 76 -3.3 -5.09426 | TGCAAGCCGAAAAAA CCGCT GCA ACCGG TCTACGCTACGCGCT yigQ 3900405 - 3901367 + | putative periplasmic protein yibD 3902388 - 3901354 - | glycosyl transferase TERM 5128 3902133 - 3902119 - G 71 -7.8 -3.92075 | ATCCGCATCGACAAA GGCGAC ATA ATCGCC GGTCGCCGCTTGCAG TERM 5129 3902606 - 3902626 + r 71 -6.8 -4.13767 | opp_overlap 3902606 TTCCCTAACAAAAAA GGTTGGCG AATGA CACCAACC TTTTACGATGAAACG TERM 5130 3902626 - 3902606 - R 100 -9 -5.4505 | opp_overlap 3902606 TTCCCTAACAAAAAA GGTTGGCG AATGA CACCAACC TTTTACGATGAAACG TERM 5131 3902677 - 3902641 - R 72 -10.4 -2.87051 | gap 1, opp_overlap 3902649 3902651 3902666, overlap 3902640 3902649 3902651 CTTTTACGATGAAAC GTATATCAGACCCGATA AAAT TATCGGGTCTC-TATAC CCTTCATACTTCAAG TERM 5132 3902649 - 3902670 + r 82 -13.1 -2.92157 | opp_overlap 3902641 3902640 3902649 3902651, overlap 3902651 3902666 ATGAAACGTATATCA GACCCGATA AAAT TATCGGGTC TCTATACCCTTCATA TERM 5133 3902670 - 3902649 - R 81 -13.1 -2.68799 | opp_overlap 3902649 3902651 3902666, overlap 3902641 3902640 3902651 ATGAAACGTATATCA GACCCGATA AAAT TATCGGGTC TCTATACCCTTCATA TERM 5134 3902651 - 3902668 + r 70 -9.9 -3.00994 | opp_overlap 3902649 3902641 3902640 3902651, overlap 3902649 3902666 GAAACGTATATCAGA CCCGATA AAAT TATCGGG TCTCTATACCCTTCA TERM 5135 3902767 - 3902789 + r 73 -11.4 -2.71144 | opp_overlap 3902763 3902771, overlap 3902771 GTCGCAAGCGACGTT CAAATCTGCT CCC GGCAGATTTG TCGTTCACCCCAGTC tdh 3903907 - 3902882 - | L-threonine 3-dehydrogenase TERM 5136 3903730 - 3903747 + g 76 -2.7 -5.00884 | ATTCATGCCCCACGA CCATC GGAACCGG GATGG TTTTTTGCGACCAGT kbl 3905113 - 3903917 - | 2-amino-3-ketobutyrate coenzyme A ligase rfaD 3905316 - 3906248 + | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 5137 3906740 - 3906780 + G 100 -17.8 -3.3197 | opp_overlap 3906751, overlap 3906744 3906751 CAGCTCCAAGTTAGC GAGGGTGAAAAGTCGCTG ATGTG CAGCGACTTTTCACTATC TTCTGAACGTCCTCT TERM 5138 3906744 - 3906776 + G 100 -19.4 -3.17622 | opp_overlap 3906751, overlap 3906740 3906751 TCCAAGTTAGCGAGG GTGAAAAGTCGCTG ATGTG CAGCGACTTTTCAC TATCTTCTGAACGTC TERM 5139 3906769 - 3906751 - g 86 -10.3 -4.11692 | opp_overlap 3906744 3906740 3906751 TAGCGAGGGTGAAAA GTCGCTG ATGTG CAGCGAC TTTTCACTATCTTCT TERM 5140 3906751 - 3906769 + G 90 -10.3 -4.28977 | opp_overlap 3906751, overlap 3906744 3906740 TAGCGAGGGTGAAAA GTCGCTG ATGTG CAGCGAC TTTTCACTATCTTCT rfaF 3906251 - 3907297 + | ADP-heptose:LPS heptosyltransferase II rfaC 3907297 - 3908250 + | ADP-heptose:LPS heptosyl transferase I rfaL 3908290 - 3909504 + | O-antigen ligase TERM 5141 3909539 - 3909510 - T 100 -13.7 -5.82281 | opp_overlap 3909510 AAATAGATAAAAAAA CGCGCTGATAC TTATTACG GTATCAGCGCG TTTTCCATCATCAGG TERM 5142 3909510 - 3909539 + T 100 -14.4 -4.21194 | opp_overlap 3909510 AAATAGATAAAAAAA CGCGCTGATACT TATTAC GGTATCAGCGCG TTTTCCATCATCAGG rfaK 3910706 - 3909561 - | putative hexose transferase rfaZ 3911616 - 3910807 - | lipopolysaccharide core biosynthesis protein TERM 5143 3911267 - 3911239 - G 75 -6 -4.57341 | AATTTTCTTTAAAAA GCCCCCTTTTTC TCGGC GATAAAAGGAGC GAATAATTAAACAGT TERM 5144 3911392 - 3911378 - G 77 -4.2 -4.94992 | CTAAAGTTATAAAAA TCTTCG CGC CGACGA TGGAGGAAGCGAATA rfaY 3912464 - 3911766 - | lipopolysaccharide core biosynthesis protein TERM 5145 3912234 - 3912261 + g 91 -3.6 -5.46698 | gap 1, opp_overlap 3912240 GTAGTAATCTCCTTT TACT-AACGATTT GAA AAAGCGTTCAGTA TTTTTTACTTTTGGA TERM 5146 3912407 - 3912438 + g 74 -2.3 -5.04265 | overlap 3912408 3912410 3912412 ATATCTCAATGTATT TTTCACCGTCTTT TTTGAC AAAGACGGTATAG TTTTTAATCTTTTTT rfaJ 3913497 - 3912487 - | lipopolysaccharide glucosyltransferase TERM 5147 3912925 - 3912907 - G 80 -4.6 -5.0925 | opp_overlap 3912907 TGCCAAAAGTAAAAA TGCCTT TTTGGTT AAGGCA TTCTCTTTCCATAAT TERM 5148 3913097 - 3913083 - G 74 -7.2 -4.15106 | opp_overlap 3913082 3913083 3913085, overlap 3913086 GATCAAGCTGTAAAA GATCTT GCA AAGATC CTTTGCATACAACAT rfaI 3914528 - 3913515 - | lipopolysaccharide-alpha-1,3-D-galactosyltransferase rfaB 3915613 - 3914534 - | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase yibR 3915916 - 3915683 - | putative inner membrane protein rfaP 3916745 - 3915948 - | lipopolysaccharide core biosynthetic protein TERM 5149 3916052 - 3916034 - G 74 -7.4 -4.07687 | ATTCTTTTTGCAAAA TCTCTCGC AGG GGGAGAGA GAAATACTCACGCAT rfaG 3917862 - 3916738 - | glucosyltransferase I TERM 5150 3917109 - 3917096 - G 78 -2.3 -5.24129 | opp_overlap 3917107, overlap 3917097 CGTCCGGAGAAAAAA TGCAC ATTC GTGCC GACGCCGCTTCTTTC rfaQ 3918893 - 3917859 - | lipopolysaccharide core biosynthesis protein TERM 5151 3917885 - 3917905 + g 76 -3.3 -5.08824 | gap 1 TGTCCAAATCTATGG TGCGTGCC TCATGC GGCA-GCA TTTTTTCCGTCGCGG kdtA 3919338 - 3920615 + | 3-deoxy-D-manno-octulosonic-acid transferase coaD 3920624 - 3921103 + | phosphopantetheine adenylyltransferase mutM 3921940 - 3921131 - | formamidopyrimidine-DNA glycosylase TERM 5152 3922020 - 3921992 - R 86 -9 -4.38712 | gap 1, opp_overlap 3921993 3921999, overlap 3921999 GGGACGGCCAGAAAA CAAAAAACCCCGC CGAA GCGAGG-TTTTTG TTACATCAAAGCGAG TERM 5153 3922014 - 3921999 - R 100 -8.2 -5.86976 | opp_overlap 3921993 3921999, overlap 3921992 CCAGAAAACAAAAAA CCCCGC CGAA GCGAGG TTTTTGTTACATCAA TERM 5154 3921999 - 3922014 + r 82 -6 -5.10461 | opp_overlap 3921999 3921992, overlap 3921993 CCAGAAAACAAAAAA CCCCGC CGAA GCGAGG TTTTTGTTACATCAA rpmG 3922205 - 3922038 - | 50S ribosomal protein L33 TERM 5155 3922082 - 3922106 + g 72 -3.6 -4.71482 | gap 1, opp_overlap 3922082, overlap 3922075 CGTGCTGACGGACAA CTGGATC-GAA TTTT TTCAGTTCCAG TTTTTCCGGTTTAGT rpmB 3922462 - 3922226 - | 50S ribosomal protein L28 TERM 5156 3922667 - 3922654 - R 72 -6.7 -4.2074 | overlap 3922657 TCCCGAACAGACAAA GATCC CGAT GGATC GCGCAAAGAATCTTA radC 3923345 - 3922680 - | DNA repair protein RadC TERM 5157 3924459 - 3924441 - g 71 -4.5 -4.67168 | gap 1, overlap 3924432 AAAAATGGTCAAAAA CCCGGACA TTGT CG-CCGGG GTGGCCGCACTCAGT dfp 3923521 - 3924741 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase dut 3924722 - 3925177 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 5158 3925210 - 3925230 + F 70 -9 -3.33492 | AACGTCATAATACTG CCGCAAGC GCTGA GTTTGCGG TTATAGCGTGGGTGC TERM 5159 3925560 - 3925533 - g 91 -4 -5.69023 | opp_overlap 3925533 3925539 AAAAGATGAAAAAAA CACCAGCACGCG TTTG CGCCTGATTGTG TTGCTGATTCTGGGT slmA 3925285 - 3925881 + | nucleoid occlusion protein pyrE 3926600 - 3925959 - | orotate phosphoribosyltransferase TERM 5160 3926469 - 3926449 - G 76 -5.3 -4.82901 | opp_overlap 3926462 GCTTCGGCATAAAAA CGGCCTAAC AAC GCCAGGTCG CGCCCGGTATTAAAC TERM 5161 3926672 - 3926655 - R 100 -11.3 -5.96219 | TACGGACAAAAAAAA GGCGACT TTTC AGTCGCC TTAAAATCAATTTTC rph 3927395 - 3926679 - | ribonuclease PH TERM 5162 3928244 - 3928226 - g 85 -2.4 -5.45652 | gap 1, overlap 3928228 ATTCTGAAGAAAAAA GA-GGCG GTAGGT CGCCGTC TGGACTTCATGATGC yicC 3927521 - 3928384 + | hypothetical protein TERM 5163 3928403 - 3928432 + T 80 -10 -3.93695 | gap 1, opp_overlap 3928400 3928409 TGGCGCTCAATATGT CAC-AGAGCCCGC CTTAT GCGGGCTCTCGCG TTTATCGGTAGTACG TERM 5164 3928425 - 3928409 - T 72 -10.8 -2.91735 | opp_overlap 3928403, overlap 3928400 TCAATATGTCACAGA GCCCGC CTTAT GCGGGC TCTCGCGTTTATCGG STM3736 3929336 - 3928434 - | putative transcriptional regulator TERM 5165 3928561 - 3928523 - G 75 -3.8 -4.8667 | gap 1, overlap 3928525 3928526 GATACTGCATAAAAA TAGCGCCTTCCGCCTGC TCCCCG GCAAGCGGCAGG-ACAA AAAGACCGCGCTTAT TERM 5166 3929140 - 3929109 - G 70 -5.1 -4.50761 | ATTAAGCGAAACAAA CACAGGCGCCA ATTTGTCACG CAGCGCCTGCG CATAAGGCGTAGGAA TERM 5167 3930019 - 3930049 + G 76 -12.6 -2.70932 | opp_overlap 3930018 3930026, overlap 3930024 3930026 AAGACGCTAATTTAC GCAGATAGTCTCGC CAC GCCCGACTATCTGC TGATTAACAACAAAA STM3737 3929410 - 3930291 + | putative Zn-dependent hydrolase TERM 5168 3930308 - 3930326 + F 83 -8.8 -4.27465 | opp_overlap 3930300 3930304, overlap 3930306 GAAATAACTCACCGG CGGCGC GTCCAGG GCGCCG TTCTTTTAAATTATC TERM 5169 3930892 - 3930920 + G 70 -9.6 -3.35046 | gap 1, overlap 3930905 CGAAGGGCCAATTAT CGCC-GTGGTGGC CGCC GTCACTACTGGCG TCTTTGGCGGCGTGC yigC 3930542 - 3931159 + | putative inner membrane protein ligB 3932841 - 3931156 - | NAD-dependent DNA ligase LigB TERM 5170 3933153 - 3933165 + G 80 -9.1 -4.15044 | opp_overlap 3933153 3933149 GCGCGGGTAAATCCA GCCTG ATT CAGGC TTTATTAAAAACCCA TERM 5171 3933441 - 3933458 + G 85 -2.6 -5.45802 | opp_overlap 3933439 3933441 AAATTCGCGAAAAGA TGCCGC AAGCAC GCAGCA TTTTTATTTTGCCGC gmk 3933098 - 3933721 + | guanylate kinase TERM 5172 3933941 - 3933912 - g 72 -3.5 -4.71401 | gap 1, overlap 3933904 3933915 3933916 AAGAAAACGATAAAA CTACCGTTATCGCG CTG CGCGAAATCGA-AG AAGGTCTGATTAACA rpoZ 3933776 - 3934051 + | DNA-directed RNA polymerase subunit omega TERM 5173 3935270 - 3935292 + G 84 -9 -4.23758 | overlap 3935271 CGCATTGTCGAACTG CCCGCTGGCG CTA CGCCGGTGGA TTTTGCCTATGCAGT TERM 5174 3935271 - 3935291 + G 81 -12.5 -3.13773 | overlap 3935270 GCATTGTCGAACTGC CCGCTGGCG CTA CGCCGGTGG ATTTTGCCTATGCAG TERM 5175 3935717 - 3935689 - g 83 -7.3 -4.56775 | AGTGGTCGCGAAAAA TCTGCAGCAAGGC GAA GCCGTGGTGCCGA CCGTTGCGCAATCGA spoT 3934070 - 3936181 + | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 5176 3936732 - 3936746 + G 71 -10 -3.59583 | opp_overlap 3936732 TTGCCGGAAGATGAA CAGCAG CGC CTGCTG TTTGAGGGTGGTTAT TERM 5177 3936746 - 3936732 - g 70 -10 -3.36273 | opp_overlap 3936732 TTGCCGGAAGATGAA CAGCAG CGC CTGCTG TTTGAGGGTGGTTAT spoU 3936186 - 3936875 + | tRNA guanosine-2'-O-methyltransferase TERM 5178 3937710 - 3937685 - g 74 -10.3 -3.53012 | overlap 3937686 TCGTTGCCGTTTAAA CCCACCAGCGC GCAG GCGCGGGTGGT AGCAGAGATCGAACG TERM 5179 3937709 - 3937686 - g 79 -13.8 -2.71712 | overlap 3937685 CGTTGCCGTTTAAAC CCACCAGCGC GCAG GCGCGGGTGG TAGCAGAGATCGAAC recG 3936881 - 3938962 + | ATP-dependent DNA helicase RecG STM3745 3939816 - 3938965 - | putative cytoplasmic protein TERM 5180 3939349 - 3939334 - G 71 -7.5 -3.98083 | GAGCGAACGGATAAA CGGCG CAATGC CGCCG AGAACATTGAAGGTA gltS 3941024 - 3939819 - | glutamate transport protein TERM 5181 3939906 - 3939888 - G 70 -6.6 -4.10188 | overlap 3939889 GATATCGATAAAGAA CGCGCCGA CCA TCGGCACC ACCAGGAACGCCATA TERM 5182 3941673 - 3941687 + G 71 -7.8 -3.9398 | TGATGCTGGCAAGCT GCACCG AGA TGGTGC TTTCTCGCATTCTAC yicE 3941252 - 3942643 + | putative purine/xanthine transport protein TERM 5183 3942680 - 3942647 - f 78 -5.8 -4.7657 | opp_overlap 3942654, overlap 3942648 3942649 GAAAAACCGTAAAAA CCCTGCGGCGGCGA CACGAT TCGCCGCTGCTGTA ACGCTCTTTCACCAT TERM 5184 3942678 - 3942649 - f 71 -10.6 -2.64962 | opp_overlap 3942654, overlap 3942648 3942647 AAAACCGTAAAAACC CTGCGGCGGCGA CACGAT TCGCCGCTGCTG TAACGCTCTTTCACC TERM 5185 3942654 - 3942673 + F 71 -10.7 -2.63479 | opp_overlap 3942649 3942648 3942647 CGTAAAAACCCTGCG GCGGCGA CACGAT TCGCCGC TGCTGTAACGCTCTT TERM 5186 3943934 - 3943905 - g 81 -12.9 -3.02511 | opp_overlap 3943927 3943929, overlap 3943924 CCGACTGGTTGAACA GCCTGACGCTGAA AAAA TTCAGCGCCAGCC GCAATCTGGTGATTG yicH 3942764 - 3944473 + | putative inner membrane protein yicI 3946894 - 3944576 - | alpha-xylosidase YicI yicJ 3948288 - 3946906 - | putative transporter STM3752 3949331 - 3948987 - | putative cytoplasmic protein TERM 5187 3949539 - 3949552 + H 78 -6.7 -4.65916 | AAGAGATTATTTACA GCGAT GATT ATCGC TTTTATTACCGTCAC TERM 5188 3949961 - 3949921 - H 75 -6.2 -4.46581 | overlap 3949922 3949923 TAAAACGTGATAAAA GGC-GTAACCTTTGCCCGCT TAA AGCGGGCAA-GATTGCAGGC AAGAGATGTTATTAT sugR 3950009 - 3951199 + | ATP binding protein STM3754 3951196 - 3951546 + | putative cytoplasmic protein TERM 5189 3951968 - 3951939 - g 71 -5.9 -4.28361 | gap 1, overlap 3951944 CGAACTTGAGCAAAA CGCAACCTGTAAGT CTT ACTTACAAGTT-CA ACAGGAAGGTAGCCG TERM 5190 3952204 - 3952231 + G 73 -6.2 -4.42806 | opp_overlap 3952190, overlap 3952206 ATGCTGGAGCGTATC CGCGATATTCGC GCCA GCGAACGTCGGG TTTATTTGCGGGTAC rhuM 3951733 - 3952770 + | putative cytoplasmic protein TERM 5191 3953279 - 3953298 + F 74 -8.6 -3.89822 | opp_overlap 3953277 3953279 ATGAATGGTTAAAGA TATCTGCC CTGA GGCGGATA TTTGTGAAGTGACTG rmbA 3954069 - 3954686 + | putative cytoplasmic protein TERM 5192 3955433 - 3955411 - g 71 -4.8 -4.58395 | overlap 3955413 GTCACGTGCCAAAAA TACGATTGTC GTC GGCAATCGTG CGCATATTGTTACTA TERM 5193 3956427 - 3956413 - g 83 -5.7 -4.84529 | opp_overlap 3956412 GCAGAAAGGTAAAAA CTGGT ATCTG ACCAG CTACATTGAGCCGGA misL 3954761 - 3957628 + | putative autotransporter TERM 5194 3957667 - 3957641 - T 76 -9.4 -3.68569 | opp_overlap 3957645, overlap 3957643 3957645 TGATTCAGGTAACAA CAGAGCCGCTGA TCT TCAGCGGCTTTT ACCCGGAAACGCTTT TERM 5195 3957665 - 3957643 - T 82 -12 -3.42256 | opp_overlap 3957645, overlap 3957641 3957645 ATTCAGGTAACAACA GAGCCGCTGA TCT TCAGCGGCTT TTACCCGGAAACGCT TERM 5196 3957663 - 3957645 - T 90 -14.6 -3.27902 | opp_overlap 3957645, overlap 3957643 3957641 TCAGGTAACAACAGA GCCGCTGA TCT TCAGCGGC TTTTACCCGGAAACG TERM 5197 3957645 - 3957663 + T 100 -14.6 -4.07568 | opp_overlap 3957645 3957643 3957641 TCAGGTAACAACAGA GCCGCTGA TCT TCAGCGGC TTTTACCCGGAAACG TERM 5198 3957759 - 3957741 - T 76 -4.5 -4.9725 | overlap 3957743 ATGCGTACAGAAAAA TATCGGG CGTTT CCCGATG GTGAACATAAAGCCA TERM 5199 3957757 - 3957743 - T 71 -7.1 -4.11141 | overlap 3957741 GCGTACAGAAAAATA TCGGG CGTTT CCCGA TGGTGAACATAAAGC fidL 3958187 - 3957723 - | putative inner membrane protein TERM 5200 3957781 - 3957771 - G 70 -6.8 -4.19624 | GATGGTGAACATAAA GCCA CGA TGGC CCTGAGTCAGGATGG marT 3958986 - 3958198 - | putative transcriptional regulator TERM 5201 3958381 - 3958391 + g 71 -8.2 -3.77177 | opp_overlap 3958381 CTTATAGCTTGCAAA GCGG CTG CCGC TTTCGATATCTTCAT TERM 5202 3959812 - 3959796 - H 70 -9.5 -3.08015 | overlap 3959785 TTAATGACTTTAACA CTGATAG TGA CTATCAG TGAAAGGCAACAACA slsA 3959839 - 3960519 + | putative inner membrane protein TERM 5203 3960562 - 3960542 - T 100 -14.1 -3.66803 | opp_overlap 3960533 3960542 CCTGAAGAGGCTAAA TAGCCCCAT TTA ATGGGGCTA TTTTACTTGCCATTT TERM 5204 3960542 - 3960562 + T 100 -14.1 -4.43911 | opp_overlap 3960542, overlap 3960533 CCTGAAGAGGCTAAA TAGCCCCAT TTA ATGGGGCTA TTTTACTTGCCATTT cigR 3961227 - 3960748 - | putative inner membrane protein mgtB 3964268 - 3961542 - | Mg2+ transporter TERM 5205 3963810 - 3963825 + g 73 -5.4 -4.57837 | opp_overlap 3963801, overlap 3963793 ACGCAACACCGTGGC GGTGGT GCGA ACCATC TTTTTCAGCGCCTGT TERM 5206 3964391 - 3964408 + r 77 -3.4 -5.18371 | AAAGGTTATTGCTTA CTCACT ATTTTG AGTGGG TTTTATTTTATCGAC mgtC 3965183 - 3964488 - | Mg2+ transport protein TERM 5207 3965059 - 3965039 - G 100 -8.2 -5.19328 | opp_overlap 3965044, overlap 3965040 AGCTCAGAATAAAAA CGGCGGCG CCTGT CGCCACCA GCGCATTAGTGCGTA TERM 5208 3965058 - 3965040 - G 74 -9.5 -3.70512 | opp_overlap 3965044, overlap 3965039 GCTCAGAATAAAAAC GGCGGCG CCTGT CGCCACC AGCGCATTAGTGCGT yicL 3965692 - 3966594 + | putative permease STM3766 3967578 - 3966637 - | putative cytoplasmic protein STM3767 3968557 - 3967814 - | putative cytoplasmic protein TERM 5209 3968310 - 3968326 + g 71 -7.9 -3.99324 | GCCGGGTGAGTATGG GCGGCAA TCA TCGCCGC TTTGTAGTACTGCGC STM3768 3969653 - 3968544 - | putative selenocysteine synthase TERM 5210 3969588 - 3969615 + g 73 -5.6 -4.56775 | gap 1, opp_overlap 3969588, overlap 3969579 TGAGACGCCCAGAAT GGTCATT-TTGCC GCA GGCGTTAATGACC TTTTTCAACCCCAGT STM3769.S 3970514 - 3969657 - | putative phosphotransferase system enzyme II TERM 5211 3970203 - 3970213 + g 87 -2.4 -5.64873 | opp_overlap 3970188, overlap 3970202 CGAGTCGTTAATCGG CTCG CCG CGCG TTTTTTGTTCTTCCA STM3770 3971263 - 3970514 - | putative phosphotransferase system enzyme IIC STM3771 3971894 - 3971409 - | putative phosphotransferase system enzyme IIB TERM 5212 3971556 - 3971546 - G 87 -8.2 -4.62302 | opp_overlap 3971546 TAATATTCTGAAAAA CCGC CTT GCGG TTTGGCCCGCCGCCG STM3772 3972330 - 3971905 - | putative phosphotransferase system enzyme IIA TERM 5213 3972388 - 3972432 + r 72 -9.3 -3.55071 | gap 1, opp_overlap 3972429 3972430, overlap 3972387 TGCCCGGTGGCACTG CG-CTTACCGGGCCTACAGG ACACTC CCGGTAGGCCGGATAAGGCG TTTACGCCGCTATCC TERM 5214 3972541 - 3972515 - R 73 -11.5 -2.5638 | overlap 3972514 3972513 GAGGAAGAAGAAAGG TCTGGCGAGGC GCGAA GCCCCGCCAGT AAAAGGATTAACTAT STM3773 3975347 - 3972549 - | putative transcriptional regulator TERM 5215 3972904 - 3972894 - G 71 -8.2 -3.86015 | overlap 3972895 TAGCGCGCTGATAAA GCGC ATG GCGC TGCGCTCCATCTCCA TERM 5216 3973021 - 3973011 - G 75 -6.8 -4.46112 | overlap 3973018 3973019 TTCCAGCGAAATAAA CGGA ATA TCCG GCAGCCCCGGCTGGA TERM 5217 3973638 - 3973625 - G 86 -9.5 -4.25256 | GGGCGATTAAAATAA CCCCG CAGT CGGGG CTGGCATCGATACGC TERM 5218 3974171 - 3974192 + g 71 -10.1 -3.59979 | overlap 3974158 3974157 3974155 ATGCGGGCAGCGTGC GCGCGTCTA TATT TAGCCGCGC TTTACCCTCAAACAG STM3774 3975544 - 3975837 + | putative inner membrane protein TERM 5219 3977297 - 3977279 - g 84 -3 -5.42259 | GCACGGTGAAAAAAA GCGGAGAA TGG TTTGCCGC CACCGCAGAGCATAA STM3775 3975943 - 3977325 + | putative glycosyl hydrolase nepI 3978578 - 3977385 - | ribonucleoside transporter TERM 5220 3978096 - 3978084 - G 71 -4.7 -4.59511 | AATACCGCCCAAAAA GCTGC CCA GCGGC GCGGCGATCACTAAC TERM 5221 3978758 - 3978738 - H 72 -4.7 -4.67038 | opp_overlap 3978749, overlap 3978749 CGTGTAAAACCAAAA GGTAAGACA TAG TGTATCACC TGGTGCTATACTTTA STM3777 3978794 - 3979153 + | putative cytoplasmic protein TERM 5222 3979175 - 3979155 - g 84 -9.1 -4.35327 | TCAGCAAAAACTAAA TTCAAAAGC CCT GCCTTTGAA CCGATTCATAGCGCG STM3778 3979137 - 3979460 + | putative DNA-binding protein STM3779 3979820 - 3979551 - | putative phosphotransferase system HPr protein TERM 5223 3979786 - 3979805 + g 74 -2.2 -5.01497 | gap 1 CGCGCATGAAGCCCC GTAC-TGTT CAT AACGCGTAC TTTTTGTCTAATCAT gatY 3980690 - 3979830 - | putative fructose-1,6-bisphosphate aldolase TERM 5224 3980214 - 3980233 + g 86 -10.8 -4.13945 | opp_overlap 3980212 CTCCTCAACAAAGCG CTGAACCT TCTC AGGTTCAG TTTTGCAGTCAGCCT STM3781 3982237 - 3980753 - | putative sugar kinase TERM 5225 3981191 - 3981145 - G 70 -3.4 -4.8048 | opp_overlap 3981149 CCGTCAGACCAAAAA GCAGGCCACGAGTGTGCCGATT TTT ATTTGGCGAACCCGAGCCCCGC AAATGAGGAATAAAT STM3782 3983588 - 3982230 - | putative PTS system galactitol-specific enzyme IIC component TERM 5226 3983534 - 3983507 - G 93 -4.7 -5.52986 | ATGCCAGGAAAAAAA GGACCAGCGGC AATAAA ACCGTTGGGCC AAACCCCAGGACATA STM3783 3983951 - 3983664 - | putative periplasmic protein STM3784 3984421 - 3983948 - | phosphotransferase system mannitol/fructose-specific IIA component STM3785 3985182 - 3984439 - | putative regulatory protein TERM 5227 3985340 - 3985302 - R 83 -9.8 -4.17762 | gap 1, opp_overlap 3985304, overlap 3985304 3985307 TAGTGTTCAAAACAA GATCA-CATTTCCGTGA TATATG TCACGGAAATGATGAGC TATAAGTCTCTGACG TERM 5228 3985338 - 3985304 - R 86 -11 -3.68435 | gap 1, opp_overlap 3985304, overlap 3985302 3985307 GTGTTCAAAACAAGA TCA-CATTTCCGTGA TATATG TCACGGAAATGATGA GCTATAAGTCTCTGA TERM 5229 3985334 - 3985307 - R 82 -12.9 -2.94356 | opp_overlap 3985304, overlap 3985304 3985302 TTCAAAACAAGATCA CATTTCCGTGA TATATG TCACGGAAATG ATGAGCTATAAGTCT yicN 3985987 - 3985535 - | putative inner membrane protein TERM 5230 3985672 - 3985687 + g 83 -7.5 -4.56597 | GTGTATCGGTGATCG GCGCG GCTAAA CGCGC TTTTTGCAGCAACCG TERM 5231 3986156 - 3986138 - R 100 -13.1 -5.31456 | overlap 3986127 3986122 GCAAGGCATAAAAAA GCCCGGC GTTAA GCCGGGC AAAACGTTACCAAAT uhpT 3987571 - 3986180 - | sugar phosphate antiporter TERM 5232 3986405 - 3986425 + g 76 -3.1 -5.08824 | opp_overlap 3986388, overlap 3986406 GAAGGTGCCCTTGAT ACCGTCCGC AGC GCCGATGGC TTTTTTCGGTACGAA uhpC 3989042 - 3987714 - | regulatory protein UhpC TERM 5233 3988004 - 3987994 - G 70 -6.8 -4.15044 | CCGGTGGTGAAGAAA CAGG CCG CCTG CATCACGTAGCTGGC TERM 5234 3988668 - 3988656 - G 75 -6.2 -4.58685 | AAACCCCTGGAAAAA GGCG TTCAG CGCC CATAGCAGAGCAAAG TERM 5235 3988779 - 3988756 - G 75 -6.7 -4.38712 | CCGATGCCCATAAAA TAGCGAGCG TTAGAG CGATCGCTA ACGATGCCGGAGACA uhpB 3990554 - 3989052 - | sensory histidine kinase UhpB uhpA 3991144 - 3990554 - | DNA-binding transcriptional activator UhpA TERM 5236 3991196 - 3991172 - R 100 -12.2 -5.96219 | GATGGATAAAAAAAA CGCGCTTACC TTAAC GATAAGCGCG CGGCTGTTCAAGCCT STM3791 3992232 - 3991219 - | putative cytoplasmic protein TERM 5237 3992247 - 3992279 + r 73 -7.6 -4.05788 | TGGTTGATCTCCTCA GGACGCGGCGACTT CAGCC AGGTTGCCGCGCAC TTTGCTTTCGCGCCA STM3792 3993560 - 3992244 - | putative L-fucose permease TERM 5238 3992841 - 3992852 + g 71 -7.2 -3.92075 | overlap 3992840 3992843 GCGTAACGTATCCAG CGCC GAGG GGCG TTTATGACTCGCGGT TERM 5239 3993302 - 3993316 + g 89 -2.8 -5.52384 | GGCCGATAAGTATCG CCACTT TAT AACTGG TTTTTTTAATGACCA TERM 5240 3993513 - 3993546 + g 77 -3.9 -4.99861 | gap 1, opp_overlap 3993508, overlap 3993514 3993533 3993542 CTGGAACAGAGGTGT C-TTATTCAGATACCC GTC GGGCATCTGAACGATG TTTTTATCGTTCATA TERM 5241 3993514 - 3993544 + g 74 -7.6 -4.11322 | opp_overlap 3993508, overlap 3993513 3993533 3993542 TGGAACAGAGGTGTC TTATTCAGATACCC GTC GGGCATCTGAACGA TGTTTTTATCGTTCA STM3793 3994511 - 3993591 - | putative sugar kinase TERM 5242 3993651 - 3993689 + g 90 -5.8 -5.14563 | opp_overlap 3993642 ATAAGAGGATTGGGT GCCTTTCCCGGTGACGCT GAA AGCGGCAAAGAGAACGGC TTTTTTCATGGCGGC TERM 5243 3994240 - 3994226 - G 74 -7 -4.25104 | overlap 3994227 TGGCGTTGACGAAAA TCGGCG CTA CGCCGC TGCTGGTACACGGTA TERM 5244 3994246 - 3994256 + g 80 -5.4 -4.88067 | GCTACGCCGCTGCTG GTAC ACG GTAC TTTTTCTACATACGT TERM 5245 3994570 - 3994555 - H 70 -4.8 -4.39889 | opp_overlap 3994532 ACAATGATATTAAAA TAACAT TATC ATGTTA CTTCCGTATCATTTG TERM 5246 3995350 - 3995380 + G 74 -7.6 -4.14243 | opp_overlap 3995350 TCAATCCGCGCAAAG TGTTTATTTCCGCC AGC GGCGTACATGAACA TTTTGGCGTGAGCTG STM3794 3994836 - 3995621 + | putative regulatory protein ilvN 3995913 - 3995623 - | acetolactate synthase 1 regulatory subunit ilvB 3997605 - 3995917 - | acetolactate synthase catalytic subunit TERM 5247 3997661 - 3997685 + r 89 -11.4 -4.16279 | gap 1, opp_overlap 3997661 GTCTTAAACAAAAAA CCCCGCCCGGT TTGC GCCG-GCGGGG TTTTGGAATCGTGTG TERM 5248 3997685 - 3997661 - R 100 -10.7 -5.63517 | gap 1, opp_overlap 3997661 GTCTTAAACAAAAAA CCCCGCCCGG TTTGCG CCG-GCGGGG TTTTGGAATCGTGTG ivbL 3997810 - 3997712 - | ilvB operon leader peptide TERM 5249 3998039 - 3998024 - H 100 -10.4 -5.79595 | opp_overlap 3998024 CCGGAAAACAAAAAA CCTCGC CGAA GCGAGG TTCTTACAGCGTAAT TERM 5250 3998024 - 3998039 + H 79 -10.4 -3.62775 | opp_overlap 3998024 CCGGAAAACAAAAAA CCTCGC CGAA GCGAGG TTCTTACAGCGTAAT TERM 5251 3998124 - 3998105 - H 80 -12.2 -2.99188 | opp_overlap 3998103 3998102 3998120 3998121, overlap 3998100 3998094 3998121 AACAGCAGAAGTATA CGCGTTCT GTGC AGAACGCG CAATTTCGGCGCGAA TERM 5252 3998577 - 3998556 - H 100 -17.3 -3.06831 | opp_overlap 3998556, overlap 3998545 TCAAGCCGCACCGAA GGGGAGCGG GCAA CCGCTCCCC TTTCACCTTATCCGC TERM 5253 3998556 - 3998577 + H 100 -17.3 -3.69354 | opp_overlap 3998545 3998556 TCAAGCCGCACCGAA GGGGAGCGG GCAA CCGCTCCCC TTTCACCTTATCCGC TERM 5254 3999452 - 3999466 + G 77 -7.8 -4.3014 | TGGCGGCTGGCGGGA TTGCCC TCG GGGCGA TTTTACTCCGTCTGT STM3796A.S 3998653 - 3999486 + | integral membrane protein TERM 5255 3999520 - 3999539 + TF 88 -7.8 -4.92385 | opp_overlap 3999500, overlap 3999521 AGACGTAACACATTC TCGGCAAC ATTT GTTGCCGC TTTTGTTTACATATC TERM 5256 3999521 - 3999538 + TF 82 -11.3 -3.54346 | opp_overlap 3999500, overlap 3999520 GACGTAACACATTCT CGGCAAC ATTT GTTGCCG CTTTTGTTTACATAT TERM 5257 4000310 - 4000293 - gT 72 -5.5 -4.42386 | opp_overlap 4000292 TCGCCAGCTATAAAA CGCTGTT TGGT AACGGCG CATTTAACTGTTACC TERM 5258 4000602 - 4000612 + GT 74 -2.4 -5.06414 | GGACGCTACTCATCC CCGC TGC GCTG TTTTTCTTCGGCGCC STM3799 4001885 - 4000800 - | putative periplasmic protein emrD 3999689 - 4000873 + | multidrug resistance protein D TERM 5259 4000883 - 4000903 + gT 100 -16.1 -3.66178 | GTTTAACGTTTCCCT CGCCCGGCG TTT TGCCGGGCG TTTCACATTCCGGCG TERM 5260 4001000 - 4001018 + gT 76 -3.1 -5.0538 | overlap 4001001 GAGTGTCCGCGTTTA TCGCATA CGGAA TATGCGC TTTTTTCAGCTCGCA TERM 5261 4001061 - 4001077 + gT 72 -2.2 -4.8667 | GGCAAACGCGAACTG TGAAGC GACCG GCGTCA TTTTTATCGACTCTC TERM 5262 4001152 - 4001177 + gT 73 -5.3 -4.56775 | overlap 4001135 TGCCAGCGAACCGCA GCGTTGATCCG TGCC CGAATCGCCGC TTTTTCCGCCGCCGT TERM 5263 4001257 - 4001275 + gT 72 -8.8 -3.53343 | overlap 4001269 AAGATGTGCCACTCC GCCAGTAC ATA GTTCTGGC TTTGCGCCGGCAGTT dsdC 4002872 - 4001949 - | DNA-binding transcriptional regulator DsdC TERM 5264 4002193 - 4002176 - G 74 -11.3 -3.19936 | opp_overlap 4002175 4002174 AACGATCGAAGCCAA TGCCGGA TGAA TCCGGCA AATTTACTGCAAAAT TERM 5265 4002536 - 4002501 - G 77 -11 -3.57971 | overlap 4002502 ATAGCGACGGGTAAA GTCCCCCAGCGCAGGC ACCA GCCAGCACTGGGCGAT AGAGGGACGTGAATA TERM 5266 4002535 - 4002502 - G 83 -14.5 -2.74461 | overlap 4002501 TAGCGACGGGTAAAG TCCCCCAGCGCAGGC ACCA GCCAGCACTGGGCGA TAGAGGGACGTGAAT TERM 5267 4003188 - 4003207 + G 75 -6.4 -4.55295 | AAATTCCACCCCTTC CTGGCG TTACTGCT CGCCAG TTTCTTTGTCGGCGC TERM 5268 4003785 - 4003766 - g 70 -7 -4.07687 | opp_overlap 4003774 AGTGCGCGCCGAAAA CACCCTGC CGTC GCTGGGCG CAACGCTGTTTACCG dsdX 4003098 - 4004435 + | permease DsdX TERM 5269 4004618 - 4004644 + G 71 -9.5 -3.53012 | gap 1, opp_overlap 4004642, overlap 4004599 4004613 CATGACCGTCTGGCG CGCTTTGCGCCG TATC TGGCG-AAAGCG TTTCCGCAAACCGCC TERM 5270 4004781 - 4004768 - g 81 -2.3 -5.40474 | ATGCTGTTAAAAAAA GACAG TCAC CTGGC AATCTCTGGTTCCAT TERM 5271 4005445 - 4005486 + G 78 -5.7 -4.71426 | gap 1 TATCGGTATTGATAA CCTGACG-GCGGCTGACGGC CTG GCGGTAGGTCGCGCTTCGGG TTTTGTTGGTCGGGC dsdA 4004453 - 4005775 + | D-serine dehydratase TERM 5272 4005838 - 4005798 - T 82 -11.9 -3.35046 | gap 1, opp_overlap 4005799 4005799, overlap 4005796 4005799 TCAGTGCCGGAAAGA CGGCAGCGCCATCCGGCA CGCCAT CGCCTGATGGCGCTAC-G CTTATCAGGCCTGTG TERM 5273 4005838 - 4005799 - T 76 -12.1 -2.60813 | opp_overlap 4005799 4005799, overlap 4005796 4005798 CAGTGCCGGAAAGAC GGCAGCGCCATCCGGCA CGCCAT CGCCTGATGGCGCTACG CTTATCAGGCCTGTG TERM 5274 4005799 - 4005839 + T 70 -9 -3.30771 | gap 1, opp_overlap 4005796 4005798 4005799, overlap 4005799 CAGTGCCGGAAAGAC G-GCAGCGCCATCCGGC ACGCCATC GCCTGATGGCGCTACGC TTATCAGGCCTGTGA yidF 4006387 - 4005857 - | putative cytoplasmic protein TERM 5275 4005962 - 4005950 - G 76 -3.3 -5.1101 | GGAGTAGTTAAAAAA GGTCT GGT AGCCC TCGCAAAGCTGATTT yidG 4006746 - 4006384 - | putative inner membrane protein TERM 5276 4006520 - 4006508 - G 71 -4.8 -4.57569 | TGAGTTTCGGAAAAA TCGC TATGC GCGA CATCCATCAAATTAC yidH 4007083 - 4006736 - | putative inner membrane protein TERM 5277 4007570 - 4007547 - R 72 -3.2 -5.02074 | gap 1, overlap 4007551 CCATTCCCCAAAAAA TCACCGCCA GCAGTTG TGGC-GTGA TAATACGCAGGAACA yidE 4009188 - 4007527 - | hypothetical protein TERM 5278 4007906 - 4007871 - G 80 -4.6 -4.99043 | gap 1, overlap 4007874 4007875 4007885 CCGCCAGAAACAAAA CGA-TGCCTAACTCACG CAG CGCGAGGTTGGCGCTCG GCGGCATAAACCAGT TERM 5279 4008067 - 4008093 + g 70 -2.9 -4.73388 | overlap 4008069 TCCGATGCCGATAAA CACCGGCAG CATCTGCAC CTGCTGGAG TTTTTGCTGCGCGTT TERM 5280 4009362 - 4009341 - R 100 -17.3 -5.60993 | CGTGGCATAAAAAAA GCCCCGCCA TCTC TGGCGGGGC AAGGCAAGGAGCTCA ibpB 4009806 - 4009378 - | heat shock chaperone IbpB TERM 5281 4009669 - 4009688 + g 79 -2.8 -5.17054 | overlap 4009668 4009670 TAACGCTAAGGTAAT GCGATAAT GGTT ATCGTCGC TTTTTTCGATGTTAT TERM 5282 4009815 - 4009832 + r 76 -4.9 -4.74103 | gap 1 TACGCATAATCATTT CTC-CTTC TAA GAAGCGAG TTTTTACCTTCACAC TERM 5283 4009907 - 4009891 - R 74 -11.5 -2.80113 | GAGCATGGGATGACA GGCCGCG CAA CGCGACC CGACGGAATCAGTTA ibpA 4010335 - 4009916 - | heat shock protein IbpA yidQ 4010636 - 4010971 + | hypothetical protein TERM 5284 4010982 - 4011011 + T 83 -10.7 -3.6707 | CCTGATTTATCGCCC GGTTTCCGTCACC CATA GCTGACGGAACCC TTTCACCTCTTCCAT yidR 4012199 - 4010973 - | putative cytoplasmic protein TERM 5285 4011073 - 4011059 - G 76 -3.4 -5.0133 | opp_overlap 4011067 4011068, overlap 4011062 CATCCGGTGAAAAAA CGACGG CGT CCGCAG ACGGCGGGTTGTCGT TERM 5286 4011312 - 4011297 - G 78 -6.1 -4.72272 | GTCCCGCATCAAAAA GGCGA TCGCCG TCGCC TGCGGATTACTGCGG TERM 5287 4011414 - 4011386 - G 71 -10.9 -3.30701 | overlap 4011388 GGTGAGTAAAGGTAA GACGCCGCTGAAC TAC GCCCAACGGCGGC GATGGCATCGTTGAT TERM 5288 4011412 - 4011388 - G 78 -12.1 -3.21807 | overlap 4011386 TGAGTAAAGGTAAGA CGCCGCTGAAC TAC GCCCAACGGCG GCGATGGCATCGTTG ccmH 4013364 - 4012321 - | putative heme lyase subunit TERM 5289 4012578 - 4012588 + g 87 -8.2 -4.62069 | CCGCGTAGCCCAGCG CCGC ATC GCGG TTTTTCGGGTCCAGA TERM 5290 4012981 - 4012935 - G 100 -15.6 -3.53012 | opp_overlap 4012969 4012970, overlap 4012909 CGCGCGCGCCGCAAA CCGGGGTGTCCGCCGGCAGCGG CTC CCGGCGCAGGCGCACCCGCCGG CGCGTGCGGGCGACG ccmG 4013918 - 4013361 - | heme lyase disulfide oxidoreductase ccmF 4015846 - 4013915 - | cytochrome c-type biogenesis protein ccmE 4016322 - 4015843 - | cytochrome c-type biogenesis protein CcmE ccmD 4016531 - 4016319 - | heme exporter protein C TERM 5291 4016489 - 4016478 - G 100 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TACC CGCC CATGGCGAAAAAATC TERM 5292 4016513 - 4016503 - G 76 -3.2 -5.03314 | CCCATGGCGAAAAAA TCGC TCC ACGA TGAAAATGCCGGACT ccmC 4017265 - 4016528 - | heme exporter protein TERM 5293 4017166 - 4017146 - G 83 -10.3 -4.05788 | CGGGGCGAAACCAAA GCCCCGGAC CCA GCCCGTGGC CAGCACAATGATGCC ccmB 4017976 - 4017317 - | heme exporter protein ccmA 4018590 - 4017973 - | cytochrome c biogenesis protein CcmA TERM 5294 4018316 - 4018331 + g 71 -6 -4.25283 | opp_overlap 4018303, overlap 4018283 AAGTGCAGGTTCTCC CGCGCC GTCA GGCGGG TTTTGATCCCCGGCT TERM 5295 4018427 - 4018469 + g 75 -6 -4.56775 | opp_overlap 4018419 CAGTACACCTCCCCG CCGTCCGGGCGCGCCAGC CCGGTCA GCAGGCGCAGCAGGGTGG TTTTTCCGGCGCCGT STM3820 4019996 - 4018596 - | putative cytochrome c peroxidase TERM 5296 4018984 - 4018998 + g 74 -7.1 -4.3467 | TAACCGTGTTTCTGT TGCGC GGTCA GCGCA TTTTCATCTCCACGT TERM 5297 4019040 - 4019050 + g 82 -5.4 -5.09426 | AAAGGCGGAATCCGG CGTT ATC AACG TTTTTTCGAATTCGG torD 4020818 - 4020186 - | chaperone protein TorD TERM 5298 4020691 - 4020713 + g 86 -14.9 -2.94293 | overlap 4020688 4020693 TTTAACAGCGCCAGC CAGTCCGCG ATCTC CGCGGACTG TAATTGTATTAACCC TERM 5299 4020693 - 4020711 + g 76 -11.7 -3.02147 | overlap 4020691 4020688 TAACAGCGCCAGCCA GTCCGCG ATCTC CGCGGAC TGTAATTGTATTAAC torA 4023363 - 4020811 - | trimethylamine N-oxide reductase subunit TERM 5300 4021137 - 4021186 + g 91 -14.3 -3.14132 | gap 1, opp_overlap 4021137 CGCGTGCATTGAATA CCCGCACGATGTCACCGT-TGCGG ATC CCGCGCGCGCTGGCATCCTGTGGG TTAATAAAGACCGGC TERM 5301 4022641 - 4022659 + g 71 -4.5 -4.61231 | ATCGTGATCCGGGCA CCACCAG TTTGC CTGCTGG TTTTTCACCATATCA torC 4024537 - 4023353 - | trimethylamine N-oxide reductase cytochrome c-like subunit torR 4024667 - 4025359 + | DNA-binding transcriptional regulator TorR torT 4026372 - 4025332 - | periplasmic sensory protein associated with the TorRS two-component regulatory system TERM 5302 4026306 - 4026317 + g 74 -7.2 -4.2074 | GTAGCAGTCCGGTTT CGGC TGAC GCCG TTTCTATATTCGAGA TERM 5303 4027271 - 4027255 - g 70 -5.1 -4.38927 | overlap 4027258 GCTGGAGACAATAAA CCAGTAC ACC ACACTGG TTACCCTGTTTCGTA TERM 5304 4028180 - 4028203 + G 74 -7.4 -4.08767 | gap 1, opp_overlap 4028192 GCGAAATTTACCGAT CGCG-GCAGCA TAG TGCTGCGCACG TTTTGCGACGATCAG TERM 5305 4029071 - 4029039 - g 84 -6.1 -5.04601 | overlap 4029040 4029041 CGCATAAATTAAAAA GCGGCTGCGCCAGCC TGG GGATGACGCAGGCAA CCGAAGCCTGTCGGG TERM 5306 4029070 - 4029040 - g 74 -9.6 -3.61676 | overlap 4029039 4029041 GCATAAATTAAAAAG CGGCTGCGCCAGCC TGG GGATGACGCAGGCA ACCGAAGCCTGTCGG torS 4026452 - 4029187 + | hybrid sensory histidine kinase TorS dgoT 4030550 - 4029213 - | D-galactonate transport protein TERM 5307 4029556 - 4029587 + g 77 -3.6 -5.03747 | gap 1, opp_overlap 4029539 4029555 AAACCGCAAATAATC GGCGTTTTGC-GCGC CAC GCCCAGCGAGAAGCC TTTTTTCACCAGTTT TERM 5308 4029821 - 4029836 + g 74 -2.4 -5.08824 | overlap 4029823 AGTCGGCTTTCGTCA GCGGCT GGCG GGCCTC TTTTTTCGCTGGCGC TERM 5309 4030593 - 4030609 + r 70 -10.1 -3.09784 | opp_overlap 4030590, overlap 4030592 TTATATTTAAATTGG GTTGCCC GGA GGGCGAC GTTTGTTGAGCCTAC dgoA 4031783 - 4030635 - | 2-oxo-3-deoxygalactonate 6-phosphate aldolase/galactonate dehydratase TERM 5310 4031946 - 4031970 + r 75 -9.9 -3.5393 | opp_overlap 4031944 4031946 4031967 CCGCGACGGCAAATA GCGGAACATCC GGC GGAAGTACCGC TTTCAGCGCGCTGAT TERM 5311 4031970 - 4031946 - R 73 -9.9 -3.38046 | opp_overlap 4031946, overlap 4031944 4031967 CCGCGACGGCAAATA GCGGAACATCC GGC GGAAGTACCGC TTTCAGCGCGCTGAT dgoK 4033258 - 4032380 - | 2-oxo-3-deoxygalactonate kinase TERM 5312 4033145 - 4033161 + g 72 -12.3 -2.7127 | overlap 4033144 4033147 AGGAGATTTACCGTT CAGGCGT GTA ACGCCTG CTTCTGATTGCCTGC TERM 5313 4033170 - 4033186 + g 71 -8 -3.88291 | overlap 4033173 ACGCCTGCTTCTGAT TGCCTG CTCTC CAGGCA TTTGTCGCCCTGGTA dgoR 4033944 - 4033255 - | galactonate operon transcriptional repressor TERM 5314 4033427 - 4033447 + g 74 -9.8 -3.76373 | opp_overlap 4033419 4033417 TCAAATACCGCTCGC TGTAGCGA GCTGA TCGCTACA TTTAACTGTTGCAGC TERM 5315 4034053 - 4034084 + r 72 -8.9 -3.64703 | opp_overlap 4034054, overlap 4034054 GTTATCATGCCATTA ATGTAGTACAACA CAATTA TGTTGTACTACAA TTTAGATCACAAAAA TERM 5316 4034054 - 4034083 + r 79 -12.4 -2.78679 | opp_overlap 4034054, overlap 4034053 TTATCATGCCATTAA TGTAGTACAACA CAATTA TGTTGTACTACA ATTTAGATCACAAAA TERM 5317 4034083 - 4034054 - R 83 -13.1 -3.17212 | opp_overlap 4034054 4034053 TTATCATGCCATTAA TGTAGTACAACAC AATT ATGTTGTACTACA ATTTAGATCACAAAA TERM 5318 4034168 - 4034152 - R 100 -9.4 -5.82281 | opp_overlap 4034152 AAAGACATAAAAAAA CCCGCA GCAAG TGCGGG TCGTTAAGCGAGTAT yidA 4035050 - 4034205 - | sugar phosphatase TERM 5319 4035779 - 4035757 - g 72 -4 -4.7497 | overlap 4035759 CGTATTTATTAAAAA CTGGTTCCCG AAG CAGGAACGCG GCAGAGCAAACGCGG STM3832 4035356 - 4036618 + | putative permease STM3833 4036632 - 4037825 + | putative mandelate racemase TERM 5320 4037862 - 4037826 - f 76 -7.9 -4.20148 | opp_overlap 4037825 4037828 4037830, overlap 4037831 ATCACCGTAAAATAA GCCAACTGTCTGCCTGC GCC GCAGGCAGACACCCTGT ATTTGCGAGTCGTAT TERM 5321 4037828 - 4037861 + F 70 -8.9 -3.36991 | gap 1, opp_overlap 4037826 4037831, overlap 4037825 4037830 CACCGTAAAATAAGC CA-ACTGTCTGCCTGC GCC GCAGGCAGACACCCTG TATTTGCGAGTCGTA TERM 5322 4037830 - 4037858 + F 76 -11.7 -2.54801 | opp_overlap 4037826 4037831, overlap 4037828 4037825 CCGTAAAATAAGCCA ACTGTCTGCCTGC GCC GCAGGCAGACACC CTGTATTTGCGAGTC TERM 5323 4037857 - 4037831 - f 100 -15.2 -3.37556 | opp_overlap 4037830 4037828 4037825, overlap 4037826 CGTAAAATAAGCCAA CTGTCTGCCTGC GCC GCAGGCAGACAC CCTGTATTTGCGAGT TERM 5324 4038434 - 4038421 - g 71 -4.5 -4.59993 | AAATCGACAAACAAA CGCTG TTCA CAACG GAAATCGCCCTGTAC STM3834 4037940 - 4038836 + | putative transcriptional regulator TERM 5325 4038847 - 4038812 - T 79 -12.6 -2.77523 | gap 1, opp_overlap 4038807, overlap 4038809 4038807 TGTCGATGAACATCA TGATGCCCCGGCCAACC AGC GGTAGGCCGGGG-ATTA AGGCAGGTTAAATAT gyrB 4041269 - 4038855 - | DNA gyrase subunit B TERM 5326 4041071 - 4041096 + g 73 -10.5 -3.38224 | overlap 4041069 TTACGGACACGGAGT TATCGGCGTGA ATAG TCACGACGATA TCTTTACAGTGACCT recF 4042371 - 4041298 - | recombination protein F dnaN 4043619 - 4042519 - | DNA polymerase III subunit beta TERM 5327 4043552 - 4043583 + g 81 -8.6 -4.30809 | gap 1, opp_overlap 4043535 GGCAGCGTAGGACGG CCGC-CCAGCGGGCC GCT GACCTGCTGAAGCGG TTTTAATAAATGTTC dnaA 4045024 - 4043624 - | chromosomal replication initiation protein TERM 5328 4044076 - 4044100 + g 91 -7.1 -5.14965 | overlap 4044068 ACGCTACTTCGCCTG GCAGACGAATA TCA TTTTCGTCCGC TTTTTTCATCAGGAT TERM 5329 4044710 - 4044720 + g 71 -8.2 -3.88232 | overlap 4044690 AGGCGCTACGCGCTG CGGC TGC GCCG TTGTTGTCTGCGCAG rpmH 4045685 - 4045825 + | 50S ribosomal protein L34 TERM 5330 4046026 - 4046006 - gf 74 -2.6 -5.06414 | gap 1 CGTCGCCAAGAAAAA CGTTCGACG TGCG CAT-GAACG CAACCGGATTAAACG rnpA 4045842 - 4046201 + | ribonuclease P STM3841 4046165 - 4046422 + | hypothetical protein TERM 5331 4046775 - 4046759 - g 89 -13.7 -3.58343 | TCTATCAGGCGCAAA GCGGCCT GAC AGGCCGC GACGGCCCGGATAAC yidC 4046425 - 4048071 + | putative inner membrane protein translocase component YidC TERM 5332 4048186 - 4048159 - f 78 -12.8 -2.58861 | opp_overlap 4048164, overlap 4048164 TATCAGGCCTACAAT CAAAAGGCGGTC ATAT GACCGCCTTTTT TTATTGCAACAAAGT TERM 5333 4048164 - 4048181 + F 100 -12.7 -5.7946 | opp_overlap 4048159 4048164 GGCCTACAATCAAAA GGCGGTC ATAT GACCGCC TTTTTTTATTGCAAC TERM 5334 4048181 - 4048164 - f 100 -12.7 -4.48987 | opp_overlap 4048164, overlap 4048159 GGCCTACAATCAAAA GGCGGTC ATAT GACCGCC TTTTTTTATTGCAAC trmE 4048213 - 4049577 + | tRNA modification GTPase TrmE TERM 5335 4049613 - 4049639 + F 100 -10.9 -5.00138 | opp_overlap 4049613 GTGAACGTTCACTAA CCCGCATTAAC TGCCT GTTAACGCGGG TTTTTACTTTCCATA TERM 5336 4049639 - 4049613 - f 83 -13.1 -3.16742 | opp_overlap 4049613 GTGAACGTTCACTAA CCCGCATTAAC TGCCT GTTAACGCGGG TTTTTACTTTCCATA TERM 5337 4049988 - 4050005 + F 74 -8.4 -3.97368 | opp_overlap 4049987 4049982 ATCGCAACAGATCAC GCTGGG CGAATA CCCAGC TTTCTCACTTGCAGA TERM 5338 4050960 - 4050974 + F 78 -6.4 -4.71426 | overlap 4050937 GCGCCGGGAGATGCT TCAGTC TTG GGCTGA TTTTGTTGATGCGCA TERM 5339 4051275 - 4051234 - f 100 -26.3 -3.85698 | opp_overlap 4051213 4051234 GGGTTGCGCTAGAAA GTTTTCTACCGATCCTAGA AGTC TCTAGGATCGGTAGAAAAC TTTCTAGCGCCTCCT TERM 5340 4051234 - 4051275 + F 100 -26.3 -3.87075 | opp_overlap 4051234, overlap 4051213 GGGTTGCGCTAGAAA GTTTTCTACCGATCCTAGA AGTC TCTAGGATCGGTAGAAAAC TTTCTAGCGCCTCCT TERM 5341 4051339 - 4051299 - f 76 -9.3 -3.72576 | gap 1, opp_overlap 4051309, overlap 4051309 GCCTCCTCTAGTAAA GA-GTAAAAAACGAGCAA AAAACA TTGCTCGTTTTTTTCATC AACGGAAGACAAATC TERM 5342 4051309 - 4051328 + F 100 -7.9 -5.52384 | opp_overlap 4051309 4051299 GTAAAGAGTAAAAAA CGAGCAA AAAACA TTGCTCG TTTTTTTCATCAACG TERM 5343 4051328 - 4051309 - f 95 -7.9 -5.32699 | opp_overlap 4051309, overlap 4051299 GTAAAGAGTAAAAAA CGAGCAA AAAACA TTGCTCG TTTTTTTCATCAACG TERM 5344 4051413 - 4051402 - g 79 -3 -5.243 | GAAACTATTAAAAAA CAAT TTGA ATTG TTAGACATAAGTAAC TERM 5345 4051925 - 4051915 - g 72 -4 -4.78848 | TGTGTAAATATAAAA GAAA AAC TTTC ATCAATCCCAAAAAC STM3845 4051378 - 4052340 + | putative inner membrane protein TERM 5346 4052602 - 4052635 + G 70 -7 -4.21787 | gap 1, overlap 4052596 AGACCAACGCTCAAG TTCATCTTCATACAA AATAC TTGT-TGAAGATGGA TTTTGAGAATTTTTT STM3846.s 4052340 - 4053275 + | putative reverse transcriptase TERM 5347 4053821 - 4053832 + F 70 -2.2 -5.06585 | CTATTTACAGTTTCA CCAG CTAC TTGG TTTTTGTGTCCTTTA TERM 5348 4054042 - 4054084 + F 75 -6.4 -4.53163 | overlap 4054079 CGCGCAACATCGCCC CGTATTCTTAGC-GCCACAC TTTTC GTGAGGCCGCTATGAA-ACG TTTTCTACTGTGTAG yidY 4054077 - 4055264 + | multidrug efflux system protein MdtL yidZ 4055233 - 4056192 + | DNA-binding transcriptional regulator YidZ yieE 4056350 - 4057105 + | putative cytoplasmic protein yieF 4057123 - 4057689 + | putative oxidoreductase TERM 5349 4057698 - 4057728 + T 79 -9.6 -3.78022 | opp_overlap 4057702, overlap 4057702 AGCGTAAGTTCGTTA AAAACCCTCCCCCC GAT GGGGCGAGGGTTCA TTTCATCAGTGTGCG TERM 5350 4057702 - 4057724 + T 95 -14.8 -3.57418 | opp_overlap 4057702, overlap 4057698 TAAGTTCGTTAAAAA CCCTCCCCCC GAT GGGGCGAGGG TTCATTTCATCAGTG TERM 5351 4057724 - 4057702 - T 100 -14.8 -4.58283 | opp_overlap 4057702 4057698 TAAGTTCGTTAAAAA CCCTCCCCCC GAT GGGGCGAGGG TTCATTTCATCAGTG yieG 4059071 - 4057734 - | hypothetical protein TERM 5352 4058207 - 4058187 - G 74 -6.7 -4.28111 | overlap 4058189 GATACTATCAACAAA CAGCGCCTG CTT CATGCGCGG GAATTTGCCTTTCTC TERM 5353 4058950 - 4058936 - G 74 -2.1 -5.06414 | GCGGGTTAACAAAAA CGATA TAAAC CATCG TCAGGAAAGTGGTAA yieH 4059240 - 4059905 + | 6-phosphogluconate phosphatase phoU 4060725 - 4060000 - | transcriptional regulator PhoU pstB 4061513 - 4060740 - | phosphate transporter subunit pstA 4062490 - 4061600 - | phosphate transporter permease subunit TERM 5354 4062259 - 4062285 + g 93 -17.3 -2.94144 | gap 1, overlap 4062256 GGGCGTTCGCCAGCC CGCCGCCCGCCG TGTT CGGCGG-CGGCG TCATTTCGGTAAACA pstC 4063449 - 4062490 - | phosphate transporter permease subunit TERM 5355 4063394 - 4063365 - G 77 -11.5 -3.53933 | gap 1, overlap 4063359 ACATCAATAGCACAA TCAGCGCAGCCAGT TTT ACCAGC-GCGCTGA AAATCATGTCGCCTT pstS 4064625 - 4063585 - | phosphate transporter subunit TERM 5356 4064338 - 4064361 + g 86 -7.4 -4.72272 | GATCACCGTCGGGAA CTGGAACAGG CCTT CCTGATTCAG TTTTTCGTCAGACAG TERM 5357 4064774 - 4064748 - R 100 -12.2 -5.96894 | ATGGAAATAAAAAAA GCTGGCCCGGGG AGA CACCAGACCAGC CTGCAGGGGGAGATG STM3858 4066165 - 4064792 - | putative phosphotransferase system fructose-specific component IIB aroE 4067032 - 4066214 - | shikimate 5-dehydrogenase TERM 5358 4067451 - 4067429 - g 73 -6.2 -4.40561 | GCTGGGTAAAAATAA GCACCAGGTG GCG CAACTGCTGC GTTCAAAGCTGGGCT TERM 5359 4067988 - 4067957 - g 70 -6.6 -4.08216 | opp_overlap 4067961, overlap 4067960 4067981 TGAGGTGGTGGAAAA CAATGGCTTTCATC TACA AATGAAGGCCTTTG ACCACTATTTCGGTC STM3860 4067127 - 4068884 + | putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component TERM 5360 4068993 - 4069010 + T 85 -12.7 -3.38272 | opp_overlap 4068993 CAGCGCACAAAAAAA GGCCGTC TGTC GACGGCC TTCTGCCTGGTACTA TERM 5361 4069010 - 4068993 - T 100 -12.7 -5.626 | opp_overlap 4068993 CAGCGCACAAAAAAA GGCCGTC TGTC GACGGCC TTCTGCCTGGTACTA glmS 4070864 - 4069035 - | D-fructose-6-phosphate amidotransferase TERM 5362 4070053 - 4070067 + g 74 -4.9 -4.74801 | opp_overlap 4070036, overlap 4070036 TGACCGTGGCTGATG CGCCC GGTAA GGGTG TTTTTGATCGCGTTC glmU 4072423 - 4071053 - | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 5363 4072699 - 4072718 + r 83 -9.2 -4.27584 | opp_overlap 4072699 TCAGAAAAGCAAAAA CCAGCGAC AGAG GCCGCTGG TTTTCCGTTGCGCGT TERM 5364 4072718 - 4072699 - R 100 -11.4 -5.1417 | opp_overlap 4072699 TCAGAAAAGCAAAAA CCAGCGAC AGAG GCCGCTGG TTTTCCGTTGCGCGT STM3863 4073441 - 4072743 - | putative permease TERM 5365 4073353 - 4073338 - G 75 -6 -4.55023 | overlap 4073330 CTCAATACGATAAAA CCGACG ATGG CGACGG CGAGATGAAGATAAG TERM 5366 4073554 - 4073541 - R 81 -8.1 -4.43879 | opp_overlap 4073548, overlap 4073543 AGGATTTAATGAAAA CAGCG CTGT CGCTG AAAACGCGTCGCCTT TERM 5367 4073630 - 4073649 + r 82 -7.8 -4.61566 | opp_overlap 4073630, overlap 4073625 GAGGATAAAAAAAAA CCAGTCCG CAAT CAGACTGG TTTTATGCTTTCAAG TERM 5368 4073649 - 4073630 - R 100 -10 -6.26417 | opp_overlap 4073625 4073630 GAGGATAAAAAAAAA CCAGTCCG CAAT CAGACTGG TTTTATGCTTTCAAG atpC 4074090 - 4073671 - | F0F1 ATP synthase subunit epsilon atpD 4075493 - 4074111 - | F0F1 ATP synthase subunit beta atpG 4076383 - 4075520 - | F0F1 ATP synthase subunit gamma TERM 5369 4076208 - 4076241 + g 79 -12.5 -2.91264 | opp_overlap 4076208, overlap 4076219 TTATATTCCAGATTA CCGTTCGCAAGGTGA CCAA TCACTTTGCGCATGG TCTCTGCATAAGGAC atpA 4077975 - 4076434 - | F0F1 ATP synthase subunit alpha TERM 5370 4077413 - 4077449 + g 83 -10.1 -4.13014 | overlap 4077407 4077414 CATTTGATGCCGGAG TCGCGCTGGTTGATGAT GGC GTCGATAGCCAGCGCGG TTTTACCGGTCTGAC TERM 5371 4077414 - 4077448 + g 72 -11.4 -3.07487 | overlap 4077407 4077413 ATTTGATGCCGGAGT CGCGCTGGTTGATGAT GGC GTCGATAGCCAGCGCG GTTTTACCGGTCTGA atpH 4078521 - 4077988 - | F0F1 ATP synthase subunit delta atpF 4079006 - 4078536 - | F0F1 ATP synthase subunit B TERM 5372 4078880 - 4078901 + g 71 -7.3 -3.92869 | opp_overlap 4078874 4078873 CAGCAGAAGCGAGAC CGTCAGCAA TTTC TTTCTGACG TTTCTCGATGGCTGC atpE 4079305 - 4079066 - | F0F1 ATP synthase subunit C atpB 4080167 - 4079352 - | F0F1 ATP synthase subunit A TERM 5373 4079854 - 4079834 - G 74 -11.1 -3.29325 | overlap 4079832 GGTTCATAAGGAATA CCCAGACGA AAA TCGTCAGGG CCAGCGGCGCAATCA atpI 4080556 - 4080176 - | F0F1 ATP synthase subunit I gidB 4081801 - 4081172 - | glucose-inhibited division protein B gidA 4083787 - 4081898 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA mioC 4084609 - 4084166 - | flavodoxin TERM 5374 4084726 - 4084694 - R 79 -4.2 -5.14563 | gap 1, opp_overlap 4084694 4084695, overlap 4084695 TGTGGGATTAAAAAA GCCGATCATG-GC TTGATGGT GCGCATGATCGGG TTCTGCAAGACGATC asnC 4085157 - 4084699 - | DNA-binding transcriptional regulator AsnC TERM 5375 4085617 - 4085562 - g 91 -17.1 -2.73875 | gap 2 CCTGGGGCAACATGA CTTCAGCGCGGGCGAAGGGCTGTACAC GCAC ATGAA-AGCCCTTCGCCC-CGATGAAG ACCGACTCTCTCCGC asnA 4085308 - 4086300 + | asparagine synthetase AsnA yieM 4087756 - 4086305 - | hypothetical protein TERM 5376 4086706 - 4086683 - G 83 -8 -4.40181 | overlap 4086686 AAACAGCATAATAAA GCAGCGGCGG TTAT CCGCCAGCGC AACGCGCATCAACGC TERM 5377 4087135 - 4087151 + g 74 -10.1 -3.67188 | overlap 4087133 TTAGCTCCGGCTGGG CGGCGAG AAA TTCGCCG TATTTTACGATCAGT TERM 5378 4087612 - 4087625 + g 77 -3.7 -5.00616 | overlap 4087617 GCCAGCGCGGGAGAT CGGCG GTCA CGGCG TTTTTTAAACGCGGA yieN 4089246 - 4087750 - | regulatory ATPase RavA TERM 5379 4088219 - 4088246 + g 70 -5.6 -4.51799 | opp_overlap 4088219, overlap 4088243 CGACGGCTGAACATA CCGCCTTC TTTAATGACGGT GAAGGCGG TTTTATCGCTTTGCT TERM 5380 4088762 - 4088778 + g 70 -10.1 -3.33696 | AACGCTTCCAGGCTG CTGTCCG CTT CGGGCAG TTCGTTAGAGGCCGC TERM 5381 4089055 - 4089044 - G 77 -7.2 -4.26589 | ATCAGATATTCAAAA GCGC GGGC GCGC TGGAAAGCAAACTTC TERM 5382 4089397 - 4089411 + H 79 -4.2 -5.24129 | overlap 4089396 ATTTTATGATTAATC GTGCAT ACT GTGCGC TTTTTTGTGGGCCAA TERM 5383 4090486 - 4090506 + G 81 -11.9 -3.58731 | overlap 4090477 4090475 CCGCGCTGGCGACGG TGATCGCCT CCC AGGCGGTCA TTTCCGGCGTCTTTT trkD 4089594 - 4091462 + | potassium transport protein Kup TERM 5384 4092009 - 4091992 - g 81 -4.1 -5.2166 | overlap 4091980 4091984 4091993 GAACAATTCAAAAAA TTGACTG CAGA CAGTCAG GCGGTGATTCGCAGC rbsD 4091659 - 4092078 + | D-ribose pyranase rbsA 4092086 - 4093591 + | D-ribose transporter ATP binding protein TERM 5385 4093701 - 4093713 + G 76 -3.4 -5.10029 | CGCGATTGTTTCGAC GTTG AGCCC CAAC TTTTTTACCGTTAAT rbsC 4093597 - 4094562 + | ribose ABC transporter permease protein TERM 5386 4095036 - 4095019 - g 76 -3.3 -5.04385 | overlap 4095020 4095021 TATATCGCGAAAAAA GCTGGCG AAGG CGCCAAA GTGATTGAGTTGCAA TERM 5387 4095459 - 4095430 - g 70 -2.9 -4.70879 | overlap 4095431 4095445 TTGAAAGGCGAAAAA GTTCAGGCCAA ATATCCGG TTGACCTGAAA CTGGTCATCAAGCAG rbsB 4094587 - 4095477 + | D-ribose transporter subunit RbsB rbsK 4095611 - 4096540 + | ribokinase TERM 5388 4097304 - 4097318 + G 71 -11.4 -2.87132 | ATGCGATGGCTGTCG GCGCCT ATC AGGCGC TATATCAGGCGGGGC rbsR 4096544 - 4097542 + | transcriptional repressor RbsR yieO 4098935 - 4097508 - | putative tranport protein TERM 5389 4098649 - 4098629 - G 73 -6.2 -4.42748 | CGACGCGAAAAATAA CCAATTCA GATAG TGAACTGG AGAGCGCGCAGGCCA TERM 5390 4098905 - 4098879 - G 71 -7.3 -4.06419 | gap 2 CGCCTGCATAAAGAA GGCCATCGCCGCG ATC CACGGC-A-GGCC AGCCATACTGCGCGC yieP 4099651 - 4098947 - | putative regulatory protein TERM 5391 4099579 - 4099589 + g 70 -6.8 -4.07568 | CACCCTTTAATATCC GCTG CGC CAGC TTTTCAGCCAGAACA TERM 5392 4099936 - 4099920 - R 76 -5.1 -4.75954 | AAAAGCGAAAATAAA CGCTTGA CTC TGAAGCG GGAAAGCGTAATATG TERM 5393 4101870 - 4101905 + r 77 -9.2 -4.00532 | opp_overlap 4101872 4101881 AGTCACCTGCCTTAA TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA TTTGCTCTTTAAAAA TERM 5394 4101969 - 4101945 - R 71 -8 -3.93061 | gap 1, opp_overlap 4101945 4101952, overlap 4101949 4101955 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5395 4102523 - 4102511 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5396 4105451 - 4105470 + r 100 -10.8 -6.11644 | opp_overlap 4105451 CCCTGCCAGAAATAA TCCTTAGC ATCT GCTAAGGA TTTTTTTTTGCCTAA TERM 5397 4105470 - 4105451 - R 87 -10.8 -4.06419 | opp_overlap 4105451 CCCTGCCAGAAATAA TCCTTAGC ATCT GCTAAGGA TTTTTTTTTGCCTAA TERM 5398 4105511 - 4105488 - R 76 -8.3 -4.07568 | opp_overlap 4105481 4105493 TTTTTTTGCCTAAAA TTACCTGAT TATCTG ATCAGGTAA TCGTAAGTTCCCTTC yifA 4106393 - 4105545 - | transcriptional regulator HdfR yifE 4106500 - 4106838 + | hypothetical protein TERM 5399 4106857 - 4106845 - T 85 -6.2 -5.15167 | opp_overlap 4106845, overlap 4106839 4106846 GATGATTAATAAAAA GGGC GTAAT GCCC TTTTTTTACGCCAAC TERM 5400 4106845 - 4106857 + T 90 -6.9 -5.40072 | opp_overlap 4106845 4106839 4106846 GATGATTAATAAAAA GGGCG TAA TGCCC TTTTTTTACGCCAAC yifB 4108383 - 4106863 - | putative ATP-dependent protease TERM 5401 4107146 - 4107160 + g 80 -4.2 -5.0538 | TACTGCCGTTCATGG GCGG CGATGAC CCGC TTTTTTACCGTAGCG TERM 5402 4107593 - 4107606 + g 72 -2.3 -4.8667 | overlap 4107591 GGTGAGCGAAAGGGG CGTTG CTGC CATCG TTTTTGTACCGTATC ilvL 4108735 - 4108833 + | ilvG operon leader peptide TERM 5403 4108883 - 4108856 - f 79 -11.2 -3.45366 | opp_overlap 4108858, overlap 4108841 4108858 GCCTTAACGAACTAA GACCCCCGCACC GAAA GGTCCGGGGGTT TTTTTTGGCCTGAAA TERM 5404 4108858 - 4108881 + F 100 -13.8 -5.78622 | opp_overlap 4108858 4108856 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGGCCTGA TERM 5405 4108881 - 4108858 - f 86 -13.8 -3.29727 | opp_overlap 4108858, overlap 4108856 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGGCCTGA TERM 5406 4109134 - 4109168 + G 71 -7.8 -4.03978 | overlap 4109136 4109137 TGCGGCAATGGCGGC AATCGGTTATGCCCGT TCT ACCGGCAAAACCGGTG TTTGTATCGCCACTT TERM 5407 4109136 - 4109166 + G 74 -10.4 -3.61232 | overlap 4109134 4109137 CGGCAATGGCGGCAA TCGGTTATGCCCGT TCT ACCGGCAAAACCGG TGTTTGTATCGCCAC TERM 5408 4109137 - 4109165 + G 72 -11.7 -2.76418 | overlap 4109136 4109134 GGCAATGGCGGCAAT CGGTTATGCCCGT TCT ACCGGCAAAACCG GTGTTTGTATCGCCA ilvG 4108973 - 4110619 + | acetolactate synthase 2 catalytic subunit ilvM 4110619 - 4110879 + | acetolactate synthase 2 regulatory subunit TERM 5409 4110886 - 4110869 - f 72 -5.5 -4.3767 | overlap 4110871 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAAGAAAAATGAC ilvE 4110897 - 4111826 + | branched-chain amino acid aminotransferase TERM 5410 4113512 - 4113530 + G 82 -11 -3.86346 | TGGGCAAAGCCTGCG CGCTCATC ACC GATGGGCG TTTCTCCGGCGGTAC ilvD 4111987 - 4113837 + | dihydroxy-acid dehydratase TERM 5411 4114099 - 4114074 - g 84 -3.1 -5.30348 | opp_overlap 4114073, overlap 4114076 ACCGAAGAACAAAAA GCCCACGGCGT GATT ACCGCGTCGGC GGGGAACCATGCACA TERM 5412 4115355 - 4115366 + G 71 -7.2 -4.06687 | opp_overlap 4115355 4115354 GATGAGAGCAATAAC CCGG CGTT CCGG TTCTTTCTGGCGGGT ilvA 4113840 - 4115384 + | threonine dehydratase TERM 5413 4115611 - 4115594 - f 72 -5.7 -4.40963 | ACCTGCTAAAAACAA TGTATAA AATT TTATACA CAAAGGATGTTATGT STM3906 4115668 - 4115985 + | putative cytoplasmic protein STM3907 4115982 - 4116323 + | putative cytoplasmic protein ilvY 4117213 - 4116326 - | DNA-binding transcriptional regulator IlvY TERM 5414 4116361 - 4116377 + g 100 -9.4 -5.40072 | opp_overlap 4116361 4116350 AGAACGCATCAATTA GCGGCT CATGC AGCCGC TTTTTTTGCGCGCAG TERM 5415 4116394 - 4116411 + g 90 -5.5 -5.1675 | TTTTTTGCGCGCAGA CGCCG AGTTCAAA CGGCG TTTTTTCATCGCTGC TERM 5416 4117105 - 4117073 - G 93 -13.4 -3.86897 | GTTATCGCGCACAAA CAGCGGCTGGCCGA GATCT TCTTCCAGCCGCTG AATCTGCCGGGAGAG TERM 5417 4117425 - 4117403 - g 87 -13.4 -3.19175 | opp_overlap 4117404 CTTTAATACACTGAA TCTGCGCCAG CAG CTGGCGCAGT TGGGTAAATGCCGCT TERM 5418 4117404 - 4117424 + G 100 -16.9 -3.07816 | opp_overlap 4117403 TTTAATACACTGAAT CTGCGCCAG CAG CTGGCGCAG TTGGGTAAATGCCGC ilvC 4117377 - 4118852 + | ketol-acid reductoisomerase TERM 5419 4118913 - 4118940 + T 100 -9.9 -5.28942 | gap 2 AAGCAGACGATGTAG GCCGGGTAAGGCG TAGC CGCC--ACCCGGC TTTTTATTTACGATA ppiC 4119225 - 4118944 - | peptidyl-prolyl cis-trans isomerase C STM3911 4119514 - 4119663 + | putative inner membrane protein TERM 5420 4119674 - 4119699 + F 86 -13.3 -3.32202 | overlap 4119672 GCTGATTGACCTTTT CCAGGCTGCCT GAAA AAGCAGCCTGG TCTTCTCTGGGCCTC TERM 5421 4120218 - 4120205 - g 77 -8.1 -4.18697 | AAAACGATCTCAAAA CGCCT GCGC AGGCG GCGGCCGGGGCGAAA rep 4119763 - 4121787 + | ATP-dependent DNA helicase Rep gppA 4123308 - 4121827 - | guanosine pentaphosphate phosphohydrolase TERM 5422 4123190 - 4123200 + g 78 -6.8 -4.65916 | AGACCCGCGGCCAGA CGCA CCT TGCG TTTTATTCGGGTCAG rhlB 4124692 - 4123427 - | ATP-dependent RNA helicase RhlB TERM 5423 4123944 - 4123962 + g 72 -3.8 -4.73864 | overlap 4123945 CACTCTTCTTCGATC AGCGTTTG CAG TAAACGCA TTTTCTCTTCATTAG trxA 4124836 - 4125165 + | thioredoxin TERM 5424 4125175 - 4125225 + F 71 -10.6 -2.74563 | gap 1 GCGTAATACCTTTTA TACGTCGAATGACAAAGGCGCTG TATGGT CAG-GCGTCTGTCATTCGACGAA TGATTAAGGTATCAG rho 4125584 - 4126843 + | transcription termination factor Rho TERM 5425 4126857 - 4126888 + F 100 -14.6 -4.20696 | opp_overlap 4126845 4126863, overlap 4126863 AACCTGGTCTTTACC TGAAAACGCCACGT TTTT ACGTGGCGTTTTTG TTTTGCGATTCATCC TERM 5426 4126863 - 4126882 + F 100 -13.6 -5.46706 | opp_overlap 4126863, overlap 4126857 GTCTTTACCTGAAAA CGCCACGT TTTT ACGTGGCG TTTTTGTTTTGCGAT TERM 5427 4126882 - 4126863 - f 100 -13.6 -4.13767 | opp_overlap 4126863 4126857 GTCTTTACCTGAAAA CGCCACGT TTTT ACGTGGCG TTTTTGTTTTGCGAT TERM 5428 4127184 - 4127164 - g 85 -7 -4.89339 | opp_overlap 4127163 AAGTAGCCATAAAAA TTGGTTTA GTGGA TAAACCAA ACTTTCGTAAACGAC TERM 5429 4127241 - 4127252 + G 71 -5.8 -4.33928 | overlap 4127228 GGGATTTCTGTGTTT GCAG GAAT CTGC TTTATGTTTGGCCTC rfe 4127073 - 4128176 + | undecaprenyl-phosphate N-acetylglucosaminyltransferase wzzE 4128188 - 4129234 + | lipopolysaccharide biosynthesis protein WzzE TERM 5430 4129246 - 4129269 + F 80 -12.5 -3.06696 | overlap 4129248 TTAGCAACACCTCTG CAGTAGGGG GCTGGG CCCCTACTG TCTATTCGAAGAGAA wecB 4129290 - 4130420 + | UDP-N-acetyl glucosamine-2-epimerase TERM 5431 4131486 - 4131459 - g 74 -10.6 -3.55444 | gap 1, overlap 4131462 TGGGGATCGCGCAAA GTATCGCCCGCTG GCA CAGCGG-CGAAAC CCTGGTCGTCGAACC wecC 4130417 - 4131679 + | UDP-N-acetyl-D-mannosamine dehydrogenase rffG 4131679 - 4132746 + | dTDP-glucose 4,6-dehydratase TERM 5432 4132961 - 4132948 - g 74 -2.3 -5.03314 | overlap 4132949 GTCAGCTTGAAAAAA CCGGC TATG GCCAA TATTTACTGGAGTTG rffH 4132779 - 4133003 + | glucose-1-phosphate thymidyl transferase TERM 5433 4133115 - 4133092 - f 74 -11 -2.84794 | overlap 4133081 4133089 TTAACGCCAGAAGCA CTGCAGGCGT GGCA ACGCGTGCAG GTAAAAGTGCCGGCT wecD 4133110 - 4133658 + | TDP-fucosamine acetyltransferase wecE 4133663 - 4134793 + | TDP-4-oxo-6-deoxy-D-glucose transaminase wzxE 4134795 - 4136045 + | O-antigen translocase TERM 5434 4136094 - 4136104 + G 74 -4.6 -4.68593 | opp_overlap 4136089 CTCACCATAACCACA CCGT GCT GCGG TTTTTCAATGATACG TERM 5435 4136193 - 4136208 + G 72 -2.4 -4.84359 | opp_overlap 4136187 TCACGGAAAGCTGCC CGGCGC TCTC GCTTCG TTTTTATGGCAGTAA TERM 5436 4136318 - 4136304 - g 72 -11.4 -3.05963 | opp_overlap 4136301 4136315, overlap 4136307 ACGGTCAGTTCAACA CCAGCC TGT GGCTGG CGCTGTTAAGCGGCG TERM 5437 4136397 - 4136411 + G 70 -5.6 -4.386 | ACGAAGTGTCCCACG GGCTGA AAT TCCGCC TTTTCTACCCGCTTC STM3927 4136042 - 4137121 + | 4-alpha-L-fucosyltransferase TERM 5438 4137406 - 4137389 - g 88 -9.9 -4.42653 | opp_overlap 4137389, overlap 4137403 4137404 ACGTGACCTATAAAA CGCGTTT ACGC AAACGCG TTGTGGATGTACCAC TERM 5439 4137389 - 4137406 + G 70 -9.9 -3.39327 | opp_overlap 4137389 4137403 4137404 ACGTGACCTATAAAA CGCGTTT ACGC AAACGCG TTGTGGATGTACCAC wecF 4137118 - 4138476 + | putative entero common antigen polymerase TERM 5440 4138865 - 4138854 - g 73 -5.8 -4.44548 | CAGACGGAAGCAAAA CTGC GGAC GCAG TGGAACGTCAATATT wecG 4138473 - 4139213 + | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 5441 4139391 - 4139379 - f 79 -9.1 -4.03888 | TACCCATAACAATAA CCGGT ACT ACCGG AACCGTTGCAAACAC TERM 5442 4140392 - 4140367 - g 87 -8.3 -4.56597 | gap 1, overlap 4140368 CGCGCTGGCGAAAAA CCGTCAACTGCC GGC GGCAGTCG-CGA AAGTCTCTCGCCACG TERM 5443 4140391 - 4140368 - g 70 -9.6 -3.33744 | gap 1, overlap 4140367 GCGCTGGCGAAAAAC CGTCAACTGCC GGC GGCAGTCG-CG AAAGTCTCTCGCCAC TERM 5444 4140417 - 4140437 + G 70 -3.1 -4.70319 | overlap 4140401 4140400 4140419 4140421 GCCACGGCGTGCCGG TCGCGGGCG TGG CGCTCTCTA TTTTGATTTTGCTGG yifK 4139420 - 4140805 + | putative transport protein YifK TERM 5445 4141349 - 4141364 + T 100 -11.8 -5.8901 | CCGACCAATTTTGAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT TERM 5446 4141552 - 4141536 - T 79 -9.3 -4.16943 | GGCGACACGCTAAAA CCTCGCC AGC GGCGGGG GGATGACAATCGCGT TERM 5447 4141823 - 4141847 + T 100 -14.3 -5.65177 | ACAGACCTGTTTTGA CGCCTGCCC CTTAACC GGGCAGGCG TTTTTTTATGCATCT hemY 4143121 - 4141922 - | putative protoheme IX biogenesis protein TERM 5448 4141957 - 4141982 + g 72 -11.1 -3.10464 | overlap 4141949 GTAATGTCAGCATCA GGCCGTCGC GCCGCATG GCGGCGGCC TCTTCCGGTTGATGC TERM 5449 4142590 - 4142612 + g 70 -5.4 -4.4078 | overlap 4142591 CCTCCAGCAGTTTGT CCACGCCGTG ACG CGCCGCGTGA TTTTCATTGCGCGCC hemX 4144290 - 4143121 - | putative uroporphyrinogen III C-methyltransferase TERM 5450 4144074 - 4144088 + g 82 -11.4 -3.84451 | overlap 4144068 CGGTCAGTTGCGTCG CCAGCG CAT CGCTGG TTTCCGTTTGCGCGG TERM 5451 4144162 - 4144192 + g 83 -9.6 -4.11105 | opp_overlap 4144179 CAGGGCAATCGCAAT CGCCACCGCGCT TAATACC AGCGCGGCGCCG TTCTTACTTTTTTTC hemD 4145052 - 4144312 - | uroporphyrinogen-III synthase TERM 5452 4144620 - 4144595 - G 75 -3.9 -4.91459 | gap 1 TAACATTCACAAAAA CTGACTTCG-GC TCC GCGCGCTGTCAG GGTTTCGCCCAGCAG hemC 4146005 - 4145049 - | porphobilinogen deaminase TERM 5453 4145266 - 4145286 + g 72 -11.1 -3.15579 | opp_overlap 4145269 CCAATCGGCACCTGA CAACCGCCT TCC AGGCGGGTG TTCATAGCGCGTTCC TERM 5454 4145283 - 4145269 - G 75 -11.4 -3.32963 | opp_overlap 4145266 ATCGGCACCTGACAA CCGCCT TCC AGGCGG GTGTTCATAGCGCGT TERM 5455 4145680 - 4145670 - G 74 -8.2 -4.05033 | overlap 4145671 TTTATTCGAGACAAA CGCG TCG CGCG GATCTTCGCGCTCGC TERM 5456 4147620 - 4147640 + G 70 -6.8 -4.11484 | GGATATCGGCGTACT GACGCGTA AGCTG TACGCGGC TTTTGAAGCGTTGCC cyaA 4146367 - 4148913 + | adenylate cyclase STM3940 4149021 - 4149374 + | putative inner membrane protein TERM 5457 4149367 - 4149380 + F 73 -9.5 -3.30243 | ACTGTGCCGGATGGC GGCGC TAAC GCGCC TTATCCAGCCTACAT STM3941 4149560 - 4150102 + | putative inner membrane protein TERM 5458 4150335 - 4150321 - g 80 -5.6 -4.95957 | opp_overlap 4150321 GAAATCAAGGAAAAA CGTTGG TCA CCAGCG TTACGTCAACTTTTT STM3942 4150114 - 4150476 + | putative cytoplasmic protein cyaY 4150867 - 4150547 - | frataxin-like protein STM3944 4151326 - 4150937 - | putative inner membrane protein TERM 5459 4151257 - 4151270 + g 95 -9.5 -4.6856 | opp_overlap 4151251, overlap 4151252 4151269 ATGAACCGATCCCCA CGCCC CGAA GGGCG TTTTTCAAATGTTTA TERM 5460 4152140 - 4152123 - g 74 -3.3 -4.85599 | overlap 4152125 GCCAGCCGATAAAAA TGCGCCG CCGC CGACGAA AAAAGTCGATTCGCA yifL 4152022 - 4152225 + | putative outer membrane lipoprotein dapF 4152262 - 4153086 + | diaminopimelate epimerase yigA 4153083 - 4153790 + | hypothetical protein xerC 4153787 - 4154689 + | site-specific tyrosine recombinase XerC TERM 5461 4155101 - 4155073 - g 82 -5.2 -5.0133 | overlap 4155075 4155096 CAGCTTGCGAAAAAA TGGCCGCTGGTG GCGAT CACTAACGGCAA TGCCCAGCCGGAACT yigB 4154689 - 4155405 + | flavin mononucleotide phosphatase TERM 5462 4155495 - 4155506 + F 87 -7.2 -5.1166 | opp_overlap 4155479 4155494, overlap 4155481 4155480 CCCCGGTAAGCGAAG CGCC ACCG GGCG TTTTTAGTTTTCATG TERM 5463 4156910 - 4156885 - g 100 -11.8 -4.8048 | opp_overlap 4156896 TTGTTACAGGAAAAA GCCCTGGCCG GGCGTG CGGCCAGCGC GCTGCAACGCTTTAT uvrD 4155541 - 4157703 + | DNA-dependent helicase II TERM 5464 4158216 - 4158204 - g 85 -2.6 -5.47399 | TCAACTGGAAAAAAA CCGA CTGAC CCGG CTGGAAGTCGAGGAG corA 4158175 - 4159125 + | magnesium/nickel/cobalt transporter CorA TERM 5465 4159171 - 4159134 - T 79 -11.3 -3.37493 | overlap 4159116 4159135 GCTGTAAGACATTAA GGCCAGGGTGATTCAGC TGCG GCTGAACCACCCTGAAA AGTTACAGGCTCCAG TERM 5466 4159170 - 4159135 - T 86 -14.8 -2.62175 | overlap 4159116 4159134 CTGTAAGACATTAAG GCCAGGGTGATTCAGC TGCG GCTGAACCACCCTGAA AAGTTACAGGCTCCA yigF 4159554 - 4159174 - | putative inner membrane protein TERM 5467 4159519 - 4159495 - G 77 -8 -4.13945 | ATGTTGATCGTAAAA TGAAAAACGG TATTT CCATTTTTCA GATAGCGAACCATCA yigG 4160028 - 4159570 - | hypothetical protein TERM 5468 4160000 - 4160029 + g 84 -5.7 -5.11033 | opp_overlap 4160000 TCGTTAGCATGACAA TATGCTACCCC CCTTACAA GGGGAGGCATA TTTTTTCAGATTATA rarD 4160947 - 4160063 - | chloramphenicol resistance TERM 5469 4160115 - 4160104 - G 71 -5.8 -4.3129 | CATCCATCACGAAAA TCGC CAGC GCGA CCCAGATAAACGCAA TERM 5470 4160207 - 4160189 - G 70 -3.1 -4.72986 | overlap 4160191 CACCGCCAGTAAAAA CATCAGC GTTGG GCCGATA TACTGGAAAAAGCCC yigI 4161458 - 4160991 - | hypothetical protein pldA 4161623 - 4162492 + | phospholipase A TERM 5471 4162527 - 4162548 + F 100 -12.3 -4.63479 | TTGCAGTTTCTCTCG CAGGCGCTG AAAA TAGCGCCTG TTTTGATTTATGGTG TERM 5472 4163449 - 4163459 + G 70 -6.8 -4.13945 | overlap 4163444 CTGCAAATCGTGGTG GCGA CCG TCGC TTTTGGAATGGGCAT TERM 5473 4164298 - 4164272 - g 71 -7.3 -4.04206 | gap 1, opp_overlap 4164275, overlap 4164255 CCACGTTGATAGAAA TGGCGG-AACAG ATGC CGGTTTCCGCCA GCGAGATGTTAAGCG recQ 4162558 - 4164405 + | ATP-dependent DNA helicase RecQ rhtC 4164469 - 4165089 + | threonine efflux system rhtB 4165749 - 4165129 - | homoserine/homoserine lactone efflux protein TERM 5474 4166313 - 4166354 + G 100 -13.8 -3.98159 | gap 2, overlap 4166349 CTGTTCCTGCAACGC CATCGTGTGCGGTGCGACGC TATT GCG-CTCACCGCGC-CGATG TTTGGTATTGTGATA pldB 4165860 - 4166876 + | lysophospholipase L2 yigL 4166892 - 4167692 + | putative sugar phosphatase TERM 5475 4167962 - 4167939 - gT 76 -5.2 -4.78149 | GGCACAACCTAAAAA CCATCAGCCT GTAT ATGCTGGTGG GGGCGATGCAGCTTG metR 4169513 - 4168560 - | metE/metH regulator yigM 4167773 - 4168672 + | putative transport protein TERM 5476 4168959 - 4168947 - Gf 72 -9.1 -3.51708 | opp_overlap 4168955, overlap 4168943 CACCGGGTAAATCAA CAGCG TTT CGCTG GCTAAATCTTCCGGC TERM 5477 4170955 - 4170944 - g 86 -7.2 -4.82901 | overlap 4170945 4170946 GCCGCGGTAGAAAAA CGCC TGGC GGCG ATCACCGCGCAGGAC metE 4169762 - 4172026 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase STM3966 4172370 - 4173713 + | putative arylsulfatase regulator TERM 5478 4173710 - 4173696 - T 86 -2.8 -5.72118 | AAAAAATATAAAAAA TGCTGT GGT AAAGCA TAGCTAACGTGGCGA dlhH 4174605 - 4173793 - | putative dienelactone hydrolase TERM 5479 4174189 - 4174172 - G 76 -2.7 -5.06414 | gap 1, overlap 4174173 CCTCCCCAACAAAAA CCGG-TGA TCA TCAGCCGA TGCGCATCCCCGCCG TERM 5480 4174440 - 4174455 + g 71 -6 -4.35116 | opp_overlap 4174429, overlap 4174437 CAATGACCACCGGCA GCGCGC CGTC GCTCGC TTTTGGTCTGGCGTA TERM 5481 4174724 - 4174737 + H 76 -5.3 -4.77036 | TATTGATTATTTATT GTGAT GAAC ATCAC TTTTTAATGGTAAGC udp 4174864 - 4175625 + | uridine phosphorylase TERM 5482 4175640 - 4175666 + F 95 -10.9 -4.65895 | opp_overlap 4175645, overlap 4175645 ATTCTCCTCTCTTTT GCAAAGGCCGA CGCGT TCGGCCTTTTC TTTTTGCGTGGCGCC TERM 5483 4175645 - 4175661 + F 100 -9.4 -5.2853 | opp_overlap 4175645, overlap 4175640 CCTCTCTTTTGCAAA GGCCGA CGCGT TCGGCC TTTTCTTTTTGCGTG TERM 5484 4175661 - 4175645 - f 72 -9.4 -3.53012 | opp_overlap 4175640 4175645 CCTCTCTTTTGCAAA GGCCGA CGCGT TCGGCC TTTTCTTTTTGCGTG yigN 4175765 - 4177195 + | DNA recombination protein RmuC TERM 5485 4177359 - 4177372 + G 72 -2.3 -4.96646 | AGAGCAGAAAGCTGA CATGG TGGC CCACG TTTTTCATTCTGTGG ubiE 4177291 - 4178046 + | ubiquinone/menaquinone biosynthesis methyltransferase yigP 4178056 - 4178661 + | putative inner membrane protein TERM 5486 4179940 - 4179950 + G 77 -8.2 -4.21974 | opp_overlap 4179940 TTGATTTGTGGAAAA CGGC GAA GCCG TTTCTTGAGTCCTGG TERM 5487 4179950 - 4179940 - g 77 -8.2 -4.08767 | opp_overlap 4179940 TTGATTTGTGGAAAA CGGC GAA GCCG TTTCTTGAGTCCTGG ubiB 4178658 - 4180298 + | putative ubiquinone biosynthesis protein UbiB tatA 4180504 - 4180758 + | twin argininte translocase protein A tatB 4180762 - 4181310 + | sec-independent translocase TERM 5488 4181503 - 4181513 + G 80 -4.6 -5.04385 | overlap 4181493 4181492 TGATTGCGACGGATG TGGC GTC GCCG TTTTTTACGCCTATC tatC 4181313 - 4182092 + | TatABCE protein translocation system subunit TERM 5489 4182119 - 4182094 - f 95 -13.3 -3.94184 | opp_overlap 4182096 4182099, overlap 4182096 ACACTGAAGACTAAA CACAACCGCCC GCCA GGGCGGTTGTC ATATGGGGGCAAGCA TERM 5490 4182096 - 4182117 + F 90 -15.9 -2.62184 | opp_overlap 4182096 4182094, overlap 4182099 ACTGAAGACTAAACA CAACCGCCC GCCA GGGCGGTTG TCATATGGGGGCAAG TERM 5491 4182117 - 4182096 - f 100 -15.9 -3.55486 | opp_overlap 4182096 4182099, overlap 4182094 ACTGAAGACTAAACA CAACCGCCC GCCA GGGCGGTTG TCATATGGGGGCAAG TERM 5492 4182099 - 4182114 + F 82 -11.8 -3.46602 | opp_overlap 4182096 4182094, overlap 4182096 GAAGACTAAACACAA CCGCCC GCCA GGGCGG TTGTCATATGGGGGC yigW 4182122 - 4182916 + | DNase TatD rfaH 4183412 - 4182924 - | transcriptional activator RfaH TERM 5493 4183280 - 4183300 + g 76 -3.2 -5.02074 | overlap 4183281 GCGGTTCGCTGACGG AGGTACGT TTTCC GCGTACCA TTTTTTCCAGGGTGA TERM 5494 4183570 - 4183544 - H 75 -3 -5.13741 | overlap 4183549 CTAATTTAACAAAAA TACAGCATCC CGATGAT GAACGCCGTA TAATGATGCGCTTAC yigC 4183598 - 4185076 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 5495 4185144 - 4185126 - f 74 -6 -4.60041 | opp_overlap 4185090 ACTCAGCTTGAAAAA TGTCGG TATTGAC CCGACA CCCGACAGAGGGAGC TERM 5496 4185232 - 4185245 + G 73 -5.9 -4.41047 | overlap 4185233 ATCGGGTTCGTTTAG TGCCG GACG CGGCG TTTTCATTCCGCGCT fre 4185162 - 4185863 + | FMN reductase TERM 5497 4185873 - 4185890 + F 100 -12.7 -4.74504 | ATTTAACTATTTTAT GGGACGC AGTA GCGTCCC TTTTTACGTTAGCCT TERM 5498 4186279 - 4186314 + G 72 -11.2 -3.06915 | overlap 4186277 4186283 CCCTATGATATCGCG CCGCTAACCGCCGTTA TTCG TAATGGCGGTTACCAG TTACGTGACGTGCAT STM3980 4186117 - 4186830 + | putative outer membrane protein TERM 5499 4187474 - 4187450 - g 74 -2.1 -5.12707 | gap 1 GCAAAGGCCAAAAAA TCGCCTGCCA GGACAG TGGCTG-CGA GGGTGACTTCGACTG STM3981 4186882 - 4187940 + | putative cytoplasmic protein TERM 5500 4187981 - 4187963 - T 100 -13.1 -5.04385 | CATACGGTGAAAAAA CCCGCCC CTGAC GGGCGGG AAAAACGGCAACTAA TERM 5501 4188047 - 4188080 + T 100 -21.1 -3.09933 | TGGCTGCCTTTGCTC ACCCCGGGCACATAG TTAT CTATGTGCCCGGGGA TTCGCTCAGTTGCCG fadA 4189300 - 4188137 - | 3-ketoacyl-CoA thiolase TERM 5502 4188981 - 4188967 - G 70 -7 -4.1347 | CGCCAACCAGACAAA CCTGCG CAT CGCCGG TCATGATCATTCGCG fadB 4191499 - 4189310 - | multifunctional fatty acid oxidation complex subunit alpha TERM 5503 4189880 - 4189912 + g 72 -4 -4.69027 | gap 1, opp_overlap 4189884 4189886 ACCCACCACGTCGAG CAGATAGGCCGGGCC CATC GGCCAG-CCGAACTG TTTTTCCATCACTTT pepQ 4191689 - 4193020 + | proline dipeptidase yigZ 4193020 - 4193634 + | hypothetical protein TERM 5504 4193912 - 4193933 + G 86 -7.9 -4.77173 | overlap 4193913 GTTCTGGACCGTGCT GGGCAGCGT GGGT GCGCTGCCG TTTATTTTCTCGGAA TERM 5505 4193913 - 4193932 + G 75 -11.4 -3.45581 | overlap 4193912 TTCTGGACCGTGCTG GGCAGCGT GGGT GCGCTGCC GTTTATTTTCTCGGA trkH 4193673 - 4195124 + | potassium transporter hemG 4195136 - 4195681 + | protoporphyrinogen oxidase TERM 5506 4195863 - 4195847 - T 76 -5.1 -4.75954 | AAAAGCGAAAATAAA CGCTTGA CTC TGAAGCG GGAAAGCGTAATATG TERM 5507 4197994 - 4197957 - T 77 -3.4 -5.14563 | opp_overlap 4197959 4197987, overlap 4197959 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 5508 4198057 - 4198033 - T 71 -8 -3.93061 | gap 1, opp_overlap 4198033 4198040, overlap 4198037 4198043 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5509 4198611 - 4198599 - T 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5510 4201422 - 4201471 + T 100 -22.5 -2.7035 | opp_overlap 4201426 4201431, overlap 4201426 4201431 4201436 GGAACTGCCAGGCAT CAAATAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTATCTG TGGTCTGTCGGTGAG TERM 5511 4201467 - 4201426 - T 100 -17.5 -3.76224 | opp_overlap 4201422 4201426 4201431 4201436, overlap 4201431 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTGGTCTGTCGG TERM 5512 4201426 - 4201467 + T 100 -21.9 -2.99545 | opp_overlap 4201426 4201431, overlap 4201422 4201431 4201436 CTGCCAGGCATCAAA TAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTA TCTGTGGTCTGTCGG TERM 5513 4201431 - 4201462 + T 100 -17.4 -4.63586 | opp_overlap 4201426 4201431, overlap 4201426 4201422 4201436 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTGGTCT TERM 5514 4201462 - 4201431 - T 100 -13 -4.9448 | opp_overlap 4201431 4201426 4201422 4201436, overlap 4201426 AGGCATCAAATAAAA CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTATCTGTGGTCT TERM 5515 4201436 - 4201457 + T 100 -15.9 -5.24647 | opp_overlap 4201431 4201426, overlap 4201431 4201426 4201422 TCAAATAAAACGAAG GGCCCTGTC GGAA GACAGGGCC TTTTGTTTTATCTGT TERM 5516 4201586 - 4201567 - T 86 -11.4 -3.68073 | opp_overlap 4201567 TAGTTTAGTGAAGAA GCCCATCC TGAC GGACGGGC TTTTTTGCGTGTGCG TERM 5517 4201567 - 4201586 + T 100 -9.2 -5.1287 | opp_overlap 4201567 TAGTTTAGTGAAGAA GCCCATCC TGAC GGACGGGC TTTTTTGCGTGTGCG TERM 5518 4201651 - 4201614 - T 71 -6.9 -4.19238 | gap 1, opp_overlap 4201628 4201629, overlap 4201629 GCGGTAACTGTAAAA CCGTAGGCCTGATAAGCG CAG CGC-CATCAGGCAACCGG CACTGCCGGATGGCG TERM 5519 4201629 - 4201673 + T 78 -12.2 -2.57931 | gap 1, opp_overlap 4201614 4201629, overlap 4201628 CCGTAGGCCTGATAA GCGCAG-CGCCATCAGGCA ACCGGCAC TGCCGGATGGCGGCTCCGC CTTATCCGGCCTACA TERM 5520 4201673 - 4201629 - T 90 -13.6 -3.30124 | gap 1, opp_overlap 4201629 4201628, overlap 4201614 CCGTAGGCCTGATAA GCGCAG-CGCCATCAGGCAAC CGGC ACTGCCGGATGGCGGCTCCGC CTTATCCGGCCTACA mobB 4202199 - 4201684 - | molybdopterin-guanine dinucleotide biosynthesis protein B mobA 4202780 - 4202196 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 5521 4202393 - 4202373 - G 70 -9.7 -3.41693 | overlap 4202370 4202369 GGCACGATTAATCAA CGCGATCGT TGG ATGATCGCG CTCTCCATCATGAAC yihD 4202850 - 4203119 + | putative cytoplasmic protein TERM 5522 4203728 - 4203709 - g 87 -8.6 -4.56597 | CCCTCCGGGCAAAAA GCGGCTTT CCTG AAAGCCAC TGATACTCTACTGTC TERM 5523 4204096 - 4204074 - g 91 -7.7 -5.00616 | opp_overlap 4204073 TGCGTTTCCAAAAAA CTTTCCCTG GTTAA CAGGGGAAG ATTACTGGCAGCGAC yihE 4203196 - 4204182 + | serine/threonine protein kinase TERM 5524 4204313 - 4204327 + G 82 -5.6 -5.01535 | overlap 4204315 4204324 CCGGTCGCTGGCGAA CCCCAG GTA CTGGAG TTTTTCTCCTTCTAC TERM 5525 4204417 - 4204402 - g 80 -4.6 -5.10208 | overlap 4204404 CAATGTGAAGAAAAA GCTGCC GGAA GGCACC AAAATGACCAAGTAC dsbA 4204199 - 4204822 + | periplasmic protein disulfide isomerase I TERM 5526 4204850 - 4204826 - T 100 -14.3 -5.8096 | opp_overlap 4204829, overlap 4204829 GATAAAAAATAAAAA GAACGCCGGTC ACT GACCGGCGTTT TTATAAGATGTTTTA TERM 5527 4204847 - 4204829 - T 100 -16 -4.8855 | opp_overlap 4204829, overlap 4204826 AAAAAATAAAAAGAA CGCCGGTC ACT GACCGGCG TTTTTATAAGATGTT TERM 5528 4204829 - 4204847 + T 100 -16 -4.87273 | opp_overlap 4204829 4204826 AAAAAATAAAAAGAA CGCCGGTC ACT GACCGGCG TTTTTATAAGATGTT yihG 4205743 - 4204835 - | putative endonuclease TERM 5529 4207946 - 4207935 - g 83 -7.2 -4.63486 | overlap 4207936 AGCCGCTGAAGAAAA CGCC TGGC GGCG CGCCGTCAACGTCGG TERM 5530 4208659 - 4208626 - g 74 -11.5 -3.25802 | overlap 4208622 4208619 4208618 TATTAAATCCAGCAA CGCGGCGCGGCGCGC GGGG GCGGAACGCGCGGCG ATCAATGCTCCCATG polA 4206131 - 4208917 + | DNA polymerase I TERM 5531 4209142 - 4209168 + T 100 -18.1 -5.55769 | opp_overlap 4209135 GCTGAATATTTTAGC CGCCCCAGTCA GTTTA TGACTGGGGCG TTTTTTATTGTGCGC yihA 4209884 - 4209252 - | GTPase EngB TERM 5532 4209569 - 4209545 - G 71 -6.3 -4.29738 | opp_overlap 4209545 GGATATCCATTAAAA CGACTAAGCCC TGT AGGCTTTGACG TTTCTCCAGATATTC TERM 5533 4209705 - 4209733 + g 81 -2.3 -5.30155 | AATCAATTGGGTACG GCCCGGCGT TTTAGAGGTGC GCGCCAGGC TTTTTTGGTTGGTCA TERM 5534 4210255 - 4210244 - g 71 -5.8 -4.23674 | opp_overlap 4210244, overlap 4210240 TGTCAGGAAGACAAA CGTC CGGA GACG TTAGTAAAAGGAAAT STM4002 4210124 - 4210348 + | putative cytoplasmic protein TERM 5535 4210354 - 4210407 + F 100 -19.9 -3.99405 | opp_overlap 4210370, overlap 4210370 AACCCGTTAAGGGTC GTGAGTCAAGAAAAAAGGCGGCAGA TTAC TCTGTCGCCTTTTTTCTTTGCTTGC TTTCTGCTAGATTCC TERM 5536 4210391 - 4210370 - f 100 -10.1 -5.4833 | opp_overlap 4210354 4210370 TGAGTCAAGAAAAAA GGCGGCAGA TTAC TCTGTCGCC TTTTTTCTTTGCTTG TERM 5537 4210370 - 4210391 + F 100 -12.3 -5.72053 | opp_overlap 4210370, overlap 4210354 TGAGTCAAGAAAAAA GGCGGCAGA TTAC TCTGTCGCC TTTTTTCTTTGCTTG yihI 4210467 - 4210982 + | hypothetical protein hemN 4211171 - 4212544 + | coproporphyrinogen III oxidase glnG 4214266 - 4212857 - | nitrogen regulation protein NR(I) TERM 5538 4213314 - 4213296 - G 80 -4.4 -5.03314 | opp_overlap 4213296, overlap 4213298 GCGACCTGCAAAAAA TGGCGCGC CAG GCGCGGAA TATCCTCACGGCGTT glnL 4215324 - 4214275 - | nitrogen regulation protein NR(II) TERM 5539 4214683 - 4214667 - G 70 -10.1 -3.31799 | opp_overlap 4214665 CATAATCGCGGATAA GCCGGAC ATT ATCCGGC AGTTCCATCGACACC TERM 5540 4214870 - 4214896 + g 80 -4.9 -5.01811 | overlap 4214871 TTGCTGAGTAGCTGC GCCGCGCCGCG CAGGC CGCCGAGCGGA TTTTTGATTTCGTGC TERM 5541 4215437 - 4215420 - R 100 -11.3 -5.24129 | TTGGTGGAGAAAAAA GCCCATC CTGG GATGGGC TGAAAGTTTCCACGG glnA 4217008 - 4215599 - | glutamine synthetase TERM 5542 4216221 - 4216231 + g 70 -6.8 -4.13945 | CCGGAACCGTTATCG CCGA ACA TCGG TTTTGGCATAAAGGT TERM 5543 4217222 - 4217194 - H 72 -6.2 -4.2558 | gap 1, opp_overlap 4217178 4217185, overlap 4217196 4217217 TATGTTGCACCAAAA TAGTGCTTTAATG TGAA CATTA-AGCACCA CATTGGTGCAACAGA TERM 5544 4217231 - 4217217 - H 73 -10 -3.37959 | overlap 4217196 4217194 TAATGTGAACATTAA GCACCA CAT TGGTGC AACAGAACGCAAGCC typA 4217384 - 4219207 + | GTP-binding protein TERM 5545 4219256 - 4219230 - T 88 -8.6 -4.87665 | opp_overlap 4219230 TCTTACGGATAAAAA CCCTGCCGAAAT GAA AGCTCGGCGGGG TTTTTTTATTCACGT TERM 5546 4219230 - 4219256 + T 100 -8.7 -5.80364 | opp_overlap 4219230 TCTTACGGATAAAAA CCCTGCCGA AATGAAAGC TCGGCGGGG TTTTTTTATTCACGT STM4010 4219996 - 4219262 - | putative hydrolase TERM 5547 4219312 - 4219299 - G 74 -2.3 -5.01732 | overlap 4219300 AAGGTTGCCAAAAAA TCAGC AATC GCTGG CGTATTATGCCGACC STM4011 4220859 - 4219981 - | putative inner membrane protein TERM 5548 4220728 - 4220742 + g 100 -9.2 -5.37345 | opp_overlap 4220718, overlap 4220717 AACCATGCGCCATAG CGCGGC TTC GTCGCG TTTTTTATCGTTACG STM4012 4222097 - 4220856 - | coproporphyrinogen III oxidase STM4013.S 4222962 - 4222099 - | putative membrane-associated metal-dependent hydrolase TERM 5549 4222256 - 4222221 - G 74 -8.4 -3.97043 | gap 1, opp_overlap 4222228, overlap 4222222 CGGAACAGACAATAA CGAACGTTTCGCCGCCA GTT TGGCGG-AAAATGTTCA GTAATCCGTCGATGC TERM 5550 4222383 - 4222418 + g 70 -5.4 -4.45485 | gap 1, opp_overlap 4222383 CGATATTGATATACA TCATGACCGGTTG-GCT GCC AGCACGCTCGGCCATGA TTTTCTGGATATAAT TERM 5551 4222568 - 4222592 + g 72 -2.1 -4.91459 | opp_overlap 4222562 CCGCCAATACAGATG GTCTGGTAG CCTTTAT TTTCCAGAC TTTTTATCCATGTTG STM4014 4223575 - 4222967 - | putative periplasmic protein TERM 5552 4223655 - 4223665 + r 87 -6.8 -5.24129 | opp_overlap 4223651, overlap 4223645 TGTTCCAGTAAGCGC CGCT TGC AGCG TTTTTTATCCAACAG TERM 5553 4223760 - 4223748 - R 74 -3.4 -5.00884 | ATGTTCTGCAAAAAA TGGA TATAG TCCA GACCGATCGCGTTTA STM4015 4224853 - 4224005 - | putative cytoplasmic protein TERM 5554 4224975 - 4224955 - R 72 -10.4 -2.80195 | opp_overlap 4224955, overlap 4224952 ATTCAGGATGAATGA GCGGGCAG AACAA CTACCCGC TGTGATGCTGATTCG yshA 4225702 - 4225010 - | outer membrane porin L TERM 5555 4225243 - 4225226 - G 70 -2.8 -4.81863 | AAAGGTATAAGAAAA TTTATC GGTAAT GATAAA ATTCCAATAGTTACC yihO 4227191 - 4225770 - | GPH family transport protein TERM 5556 4227202 - 4227225 + r 78 -5.2 -5.00467 | opp_overlap 4227207, overlap 4227207 GACATAATCGCCTCT CAAAACGCCC CGCA GGGCGTTATA TTTTATTGTTGTTAA TERM 5557 4227220 - 4227207 - R 83 -9.5 -4.08064 | opp_overlap 4227202 4227207 AATCGCCTCTCAAAA CGCCC CGCA GGGCG TTATATTTTATTGTT TERM 5558 4227207 - 4227220 + r 83 -9.5 -4.12416 | opp_overlap 4227207, overlap 4227202 AATCGCCTCTCAAAA CGCCC CGCA GGGCG TTATATTTTATTGTT yihP 4228619 - 4227237 - | GPH family transport protein TERM 5559 4228253 - 4228267 + g 71 -4.2 -4.62336 | opp_overlap 4228251 4228253 4228248, overlap 4228254 ACAGCATAAACAGCA TCGTTG CGA CGACGG TTTTTCCCGTCACCT TERM 5560 4228630 - 4228662 + r 71 -9.8 -3.1577 | gap 1, overlap 4228628 4228632 CTCATTATTCTTCTC CATCT-GCCCGCAGG TTTC CCTGCGGGCGAGCCG TATTAGATATTCCGT yihQ 4230701 - 4228665 - | alpha-glucosidase TERM 5561 4228701 - 4228691 - G 76 -3.2 -5.04356 | GTAAAGAAGCAAAAA GTGA AGC CCAC TCGCTCTTCGCGCGA TERM 5562 4229435 - 4229448 + g 70 -9.5 -3.31461 | CGTTATGCATGATCT CGGCG CTGA CGCCG TTGTGCAGATACGTG TERM 5563 4230176 - 4230186 + g 71 -8.2 -3.83347 | overlap 4230174 AGGTCCAGTAATAGT CGCC GCC GGCG TTCTCTTTACAGTCT yihR 4231596 - 4230745 - | putative aldose-1-epimerase TERM 5564 4231074 - 4231037 - G 75 -6.1 -4.60487 | opp_overlap 4231038 4231040 4231040, overlap 4231038 CATGATGCGGAAAAA TCCCTGCCTGCGGGCAA TTCT TCGCTTGCAGGCAGTGT TAATACACAGCTATC TERM 5565 4231038 - 4231073 + g 76 -11.8 -3.14683 | opp_overlap 4231037 4231038, overlap 4231040 4231040 ATGATGCGGAAAAAT CCCTGCCTGCGGGCAA TTCT TCGCTTGCAGGCAGTG TTAATACACAGCTAT TERM 5566 4231073 - 4231038 - G 70 -9.6 -3.3581 | opp_overlap 4231038 4231040 4231040, overlap 4231037 ATGATGCGGAAAAAT CCCTGCCTGCGGGCAA TTCT TCGCTTGCAGGCAGTG TTAATACACAGCTAT TERM 5567 4231040 - 4231071 + g 81 -13 -3.13522 | opp_overlap 4231038 4231037, overlap 4231038 4231040 GATGCGGAAAAATCC CTGCCTGCGGGCAA TTCT TCGCTTGCAGGCAG TGTTAATACACAGCT TERM 5568 4231291 - 4231263 - G 78 -6 -4.83169 | gap 1, opp_overlap 4231263, overlap 4231249 4231265 AGGGCGGCAGAAAAA TC-GTTAGCGACG CTTC CGTCGCCGACTGA TAATTAATCTGCCAG yihS 4232847 - 4231606 - | putative isomerase yihT 4233741 - 4232863 - | putative aldolase TERM 5569 4233552 - 4233538 - G 74 -10 -3.7511 | CTGGCGATAACAGAA CTGCTG ATC CAGCAG AACGGCAGAGGCATA yihU 4234660 - 4233764 - | putative oxidoreductase TERM 5570 4235508 - 4235494 - g 89 -9.2 -4.57341 | AACTGGTTGGAAAAA GCGGCG GTA CGCCAC CAACCGGGTTTTACC yihV 4234819 - 4235721 + | putative sugar kinase TERM 5571 4236026 - 4236007 - g 89 -3.4 -5.48063 | ACGCAAGAGAAAAAA GCCATTGC GGAA GCCGTGGC TGACTATATTCCGGA yihW 4235755 - 4236558 + | putative glycerol-3-phosphate regulon repressor TERM 5572 4236622 - 4236648 + F 79 -8 -4.3821 | overlap 4236623 AAAACGGCGCTGTGA TGCAGGCGATAT TGA ACATCGTCTGCG TTTCTATTGTCTTTT yihX 4236749 - 4237348 + | phosphatase rbn 4237342 - 4238214 + | ribonuclease BN TERM 5573 4238496 - 4238523 + G 71 -7.6 -4.01564 | gap 1 CCAAGCTTTTCCGGC GGGGCTGCGC-CG GAT CGCGCGCAGGCGC TTTATGAATATTTTG yihZ 4238211 - 4238648 + | D-tyrosyl-tRNA deacylase yiiD 4238645 - 4239634 + | putative acetyltransferase STM4030.S 4240077 - 4239649 - | putative cytoplasmic protein TERM 5574 4239828 - 4239839 + g 79 -7.2 -4.39828 | opp_overlap 4239822 4239828, overlap 4239828 TTCGCAATACTGAAA CGCC AGGG GGCG TTTTCTCCAGGTGTT STM4031 4240403 - 4240092 - | putative cytoplasmic protein TERM 5575 4240477 - 4240423 - R 84 -10.2 -3.96624 | opp_overlap 4240422 TAGTTCCATTACAAA GTTTTCAACCTGAAAACAATTTAGCG CAA CGTTATCCAGTTTTCAAGTTGAAAAC AAAATTGAATTTTAG STM4032 4241418 - 4240489 - | putative acetyl esterase TERM 5576 4241793 - 4241778 - g 74 -4.6 -4.82901 | overlap 4241779 GCGGCCTGAGAAAAA TGCGCT GGGG AGCGCG AGGCAAAGGAAAGCG STM4032.2N 4241636 - 4241947 + | hypothetical protein STM4033 4241948 - 4242238 + | putative regulatory protein fdhE 4243214 - 4242285 - | formate dehydrogenase accessory protein FdhE TERM 5577 4243162 - 4243143 - G 83 -10.7 -3.9461 | opp_overlap 4243143 4243140 TCGGGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG fdoI 4243846 - 4243211 - | formate dehydrogenase-O subunit gamma fdoH 4244745 - 4243843 - | formate dehydrogenase-O beta subunit TERM 5578 4244536 - 4244560 + g 74 -9.9 -3.63569 | TTTCGCGGTTAAGTC CGCCGGGTTGT CAT ACACCCCGACG TTATTGCCCACTTCA fdoG 4247808 - 4244758 - | formate dehydrogenase alpha subunit TERM 5579 4244828 - 4244853 + g 77 -3.9 -5.00616 | opp_overlap 4244828 4244840 GCATCACCGACGAAA GGCGTTAACGT ATTG GCGATAAAGCC TTTTTTCGCCACGCC TERM 5580 4244991 - 4245019 + g 70 -8.8 -3.62522 | overlap 4244992 GGTTCGAGGAGACCT TCACGGTATCGC CATGC GCGATACCGAGC TTATTCGCCAGCTTC TERM 5581 4244992 - 4245018 + g 72 -12.3 -2.77192 | overlap 4244991 GTTCGAGGAGACCTT CACGGTATCGC CATGC GCGATACCGAG CTTATTCGCCAGCTT TERM 5582 4245609 - 4245594 - G 80 -9 -4.09864 | overlap 4245598 AGCTACCGGCGAAAA TCCAGC AGCC GCTGGA CGTCGTACCGTCATC TERM 5583 4246579 - 4246601 + g 80 -5.6 -4.89567 | gap 1 ATGCTGCGTCCAGCC CAGCG-CGT ACAGGA ACGACGCTG TTTTATCTTTTGCGC TERM 5584 4248343 - 4248330 - g 71 -9.5 -3.53811 | opp_overlap 4248339 TTTATGGGGCTGAAA GCGCG TCGT CGCGC GCTGGCCGGACGTAC fdhD 4248003 - 4248839 + | formate dehydrogenase accessory protein TERM 5585 4249017 - 4249035 + T 87 -10.2 -4.11692 | opp_overlap 4249019, overlap 4249019 TACTTCGAACGAAAA AAGCGCCC CTG GGGCGCTC TTTTGGCAGTCGCTA TERM 5586 4249019 - 4249033 + T 88 -12.8 -3.65542 | opp_overlap 4249019, overlap 4249017 CTTCGAACGAAAAAA GCGCCC CTG GGGCGC TCTTTTGGCAGTCGC TERM 5587 4249033 - 4249019 - T 100 -12.8 -5.26875 | opp_overlap 4249019 4249017 CTTCGAACGAAAAAA GCGCCC CTG GGGCGC TCTTTTGGCAGTCGC STM4039 4250138 - 4249107 - | putative inner membrane lipoprotein TERM 5588 4250458 - 4250406 - g 84 -9.1 -4.24726 | gap 2, opp_overlap 4250406 4250413, overlap 4250410 ACAATAATGTTAAAA CCGAGGCGACGCCGGCCGCCAGCAG TCAGC CTGC-GACG-CCAGCGCCTTCTCAG ACGCCGGAAACGCAA TERM 5589 4250445 - 4250410 - g 79 -13.8 -2.76291 | opp_overlap 4250406 4250413, overlap 4250406 TAATGTTAAAACCGA GGCGACGCCGGCCGCC AGCA GTCAGCCTGCGACGCC AGCGCCTTCTCAGAC TERM 5590 4251341 - 4251320 - g 71 -4.3 -4.65933 | overlap 4251321 4251322 GATTTTGAAAAGAAA CGGGTGCAG GACC CTGCAACAG GATGGATGGTTGCGG yiiG 4250363 - 4251421 + | putative cytoplasmic protein TERM 5591 4251506 - 4251492 - T 100 -8.5 -5.10208 | opp_overlap 4251492 TAACGCCAATAAAAA GCGCC GATCA GGCGC TTTTTTCGTTCATGT TERM 5592 4251492 - 4251506 + T 100 -8.5 -5.31059 | opp_overlap 4251492 TAACGCCAATAAAAA GCGCC GATCA GGCGC TTTTTTCGTTCATGT TERM 5593 4251602 - 4251591 - T 70 -2.2 -4.9218 | GAGTTATTAGAAAAA CCAG TAAT CTGA AGCTATCACAAGATG STM4041 4252099 - 4251776 - | putative inner membrane protein STM4042 4252758 - 4252099 - | putative branched-chain amino acid permease TERM 5594 4252196 - 4252163 - G 75 -6.5 -4.42386 | opp_overlap 4252193, overlap 4252167 CCGGCAGCCACAAAA GGAACGGCGGCAAGC GACA GCGCGGCGCCGCTGC AACCACGAATCAATG TERM 5595 4253096 - 4253079 - g 79 -3.3 -5.28176 | gap 1 CGCAGGTACAAAAAA CGCAGGTG ATT CGCC-GCG GAGAAGGCACCAAAG STM4042A 4252841 - 4253407 + | hypothetical protein TERM 5596 4253494 - 4253458 - T 85 -3.6 -5.49579 | gap 1, overlap 4253459 CGACAAAAAATAAAA CCGTAGGCCCGGTAAGC TTGC GCC-ATCGGGCACACGA CTTACTGCAGATAGA yiiL 4253810 - 4253496 - | putative cytoplasmic protein STM4044 4254955 - 4253807 - | putative alcohol dehydrogenase TERM 5597 4254624 - 4254643 + g 83 -10 -4.1721 | GAAGGGCCAGGGTTG GCGGTGAG GATT TTCACCGC TTTTGCGGTATCGAT rhaD 4255909 - 4255082 - | rhamnulose-1-phosphate aldolase TERM 5598 4256017 - 4255966 - R 90 -13.8 -3.30243 | opp_overlap 4255952 4255950 4255966 4255963 4256011, overlap 4255967 ACGTAGGCCGGATAA GCGCAGCGCCATCCGGCAAT CGTGTTTCATTT ATTGCCGGATGGCGACGCGG GCGTCTTATCCGGCC TERM 5599 4256016 - 4255967 - R 100 -17.3 -2.57931 | opp_overlap 4255952 4255950 4255966 4255963 4256011, overlap 4255966 CGTAGGCCGGATAAG CGCAGCGCCATCCGGCAAT CGTGTTTCATTT ATTGCCGGATGGCGACGCG GGCGTCTTATCCGGC rhaA 4257311 - 4256052 - | L-rhamnose isomerase TERM 5600 4256259 - 4256270 + g 100 -7.2 -5.27779 | opp_overlap 4256257, overlap 4256257 GGGTTCCAGCAGAGC GCGC AGCA GCGC TTTTTTCATGTTGCG TERM 5601 4256936 - 4256908 - G 91 -7.3 -4.91511 | opp_overlap 4256908, overlap 4256923 4256924 AGTGGATGAGAAAAA CAGGTGGGGTTGA AAT CCAGCCCCAGCCG GTTCGCTTTCGCCCA rhaB 4258777 - 4257308 - | rhamnulokinase rhaS 4259065 - 4259901 + | transcriptional activator RhaS TERM 5602 4260886 - 4260853 - g 74 -10.3 -3.55444 | opp_overlap 4260862 TGTTCACGCGGGAAA CCGGGATGACGCC GAGCCAAT GGCGTCATCTCAG TAATCAAAGCGATTA rhaR 4260054 - 4260902 + | transcriptional activator RhaR rhaT 4261933 - 4260899 - | rhamnose-proton symporter TERM 5603 4261524 - 4261513 - G 75 -3.6 -4.84359 | TCAGCGCGACAAAAA CGCC AAGT AGCG TCATGCGTCCCCCTT TERM 5604 4262365 - 4262348 - H 70 -4.9 -4.40184 | TCAATTAAATATAAA TATAAGG AAAT CCCTATA TTGGCGTTGTTGATG TERM 5605 4262566 - 4262576 + G 76 -5.4 -4.78753 | overlap 4262568 AATGGATTCTGTTAT GAGA AAA TCTC TTTTCTTACTATTAC STM4051 4262552 - 4263235 + | putative outer membrane protein TERM 5606 4263268 - 4263290 + T 100 -14.2 -5.82316 | TATTTATTCCCTTTT CCGGCTACTT TAT AGGTAGCCGG TTTTTTTTACCTGGT STM4052 4264700 - 4263393 - | putative C4-dicarboxylate transport system STM4053 4265208 - 4264693 - | putative C4-dicarboxylate transport system STM4054 4266210 - 4265227 - | putative periplasmic dicarboxylate-binding protein TERM 5607 4265312 - 4265322 + g 84 -3.2 -5.29782 | overlap 4265307 ATAGGCTGTACTGCC TCCT GGA AGGG TTTTTTGTCGATCTC sodA 4266539 - 4267159 + | superoxide dismutase TERM 5608 4267182 - 4267199 + F 100 -11.3 -5.71712 | opp_overlap 4267182 TGCACGTCTGTAGAA GCGAGTC TGAT GACTCGC TTTTTTTGTATCCGC TERM 5609 4267199 - 4267182 - f 77 -11.3 -3.29511 | opp_overlap 4267182 TGCACGTCTGTAGAA GCGAGTC TGAT GACTCGC TTTTTTTGTATCCGC yiiM 4267229 - 4267918 + | hypothetical protein STM4057 4267930 - 4268325 + | putative inner membrane protein TERM 5610 4268345 - 4268372 + T 100 -9.8 -4.75776 | opp_overlap 4268348, overlap 4268346 4268348 CGACGGCGAGATAAA AAATCGGCCTGC ATTC GCAGGCCGATGG TTTTTAGGTTCGCTT TERM 5611 4268346 - 4268371 + T 86 -13.3 -3.44381 | opp_overlap 4268348, overlap 4268345 4268348 GACGGCGAGATAAAA AATCGGCCTGC ATTC GCAGGCCGATG GTTTTTAGGTTCGCT TERM 5612 4268369 - 4268348 - T 100 -15.9 -5.36441 | opp_overlap 4268346 4268345 4268348 CGGCGAGATAAAAAA TCGGCCTGC ATTC GCAGGCCGA TGGTTTTTAGGTTCG TERM 5613 4268348 - 4268369 + T 100 -15.9 -3.28592 | opp_overlap 4268348, overlap 4268346 4268345 CGGCGAGATAAAAAA TCGGCCTGC ATTC GCAGGCCGA TGGTTTTTAGGTTCG cpxA 4269749 - 4268376 - | two-component sensor protein TERM 5614 4268691 - 4268706 + g 76 -10.4 -3.76125 | AACTATATTTTCCAG CGCGCT TTCC AGCGCG TTTGGGTTGCCATAG TERM 5615 4268832 - 4268847 + g 79 -3.2 -5.1485 | overlap 4268834 ATTGGCTTTCATCGT TTCGCT GACC AGCGCA TTTTTCTGTTGGTTA cpxR 4270444 - 4269746 - | DNA-binding transcriptional regulator CpxR TERM 5616 4270631 - 4270641 + G 76 -3.2 -5.00616 | GTTATGGCCTCAACG CTGG CAT TCAG TTTTTTAAGCCACGC TERM 5617 4270882 - 4270872 - g 71 -8.2 -3.79623 | AAAAATTTGATGAAA GCGC TGT GCGC GCTCAGGCAGAAAAA cpxP 4270595 - 4271095 + | periplasmic repressor CpxP TERM 5618 4271135 - 4271153 + F 100 -14.6 -6.02914 | CACCATCCCTGTCTT CCCCCACA TGA TGTGGGGG TTTTTTTTATCTCCA fieF 4271243 - 4272145 + | ferrous iron efflux protein F pfkA 4272330 - 4273292 + | 6-phosphofructokinase sbp 4273496 - 4274485 + | sulfate transporter subunit TERM 5619 4274498 - 4274522 + F 100 -15.1 -5.63517 | opp_overlap 4274498 TAAACCGTTTATAAA CCCGGTAACGT ATT ATGTTACCGGG TTTTTTCTTTGCCAC TERM 5620 4274522 - 4274498 - f 95 -12.9 -3.88583 | opp_overlap 4274498 TAAACCGTTTATAAA CCCGGTAACGT ATT ATGTTACCGGG TTTTTTCTTTGCCAC ushB 4274586 - 4275341 + | CDP-diacylglycerol pyrophosphatase TERM 5621 4275373 - 4275408 + F 80 -12.8 -2.99649 | gap 1, overlap 4275377 TGTTCATTATCTTAT TGATTCTTATCCCGGTT TAA AACCGGGGTAAGA-TCG TGTCTATAAAAATAT TERM 5622 4275377 - 4275405 + F 95 -16.9 -2.72799 | overlap 4275373 CATTATCTTATTGAT TCTTATCCCGGTT TAA AACCGGGGTAAGA TCGTGTCTATAAAAA TERM 5623 4275473 - 4275430 - f 100 -14.2 -3.73294 | opp_overlap 4275431 4275434 4275440, overlap 4275431 4275434 4275440 TAAAAATATGTGAAA TCGATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGGT TAGTTACACTCTCTT TERM 5624 4275431 - 4275472 + F 100 -17.7 -3.37053 | opp_overlap 4275430 4275431 4275434 4275440, overlap 4275434 4275440 AAAAATATGTGAAAT CGATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGG TTAGTTACACTCTCT TERM 5625 4275472 - 4275431 - f 100 -17.7 -2.82892 | opp_overlap 4275431 4275434 4275440, overlap 4275430 4275434 4275440 AAAAATATGTGAAAT CGATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATGG TTAGTTACACTCTCT TERM 5626 4275434 - 4275469 + F 100 -18 -2.84574 | opp_overlap 4275431 4275430 4275434 4275440, overlap 4275431 4275440 AATATGTGAAATCGA TCAAAAGATATAAAGG TATA CCTTTATATCTTTTGA TGGTTAGTTACACTC TERM 5627 4275469 - 4275434 - f 100 -18 -2.66098 | opp_overlap 4275434 4275431 4275440, overlap 4275431 4275430 4275440 AATATGTGAAATCGA TCAAAAGATATAAAGG TATA CCTTTATATCTTTTGA TGGTTAGTTACACTC TERM 5628 4275440 - 4275463 + F 91 -11.2 -4.37013 | opp_overlap 4275434 4275431 4275430 4275440, overlap 4275434 4275431 TGAAATCGATCAAAA GATATAAAGG TATA CCTTTATATC TTTTGATGGTTAGTT TERM 5629 4275463 - 4275440 - f 91 -11.2 -4.33165 | opp_overlap 4275440 4275434 4275431, overlap 4275434 4275431 4275430 TGAAATCGATCAAAA GATATAAAGG TATA CCTTTATATC TTTTGATGGTTAGTT STM4065 4275604 - 4276938 + | putative Na+/galactoside symporter TERM 5630 4277131 - 4277141 + G 78 -6.8 -4.59773 | overlap 4277116 TGACGCCGGCCGCTT CCTG CGC CAGG TTTTTCAGGATAACG STM4066 4276949 - 4277908 + | aminoimidazole riboside kinase STM4067 4277918 - 4278958 + | putative ADP-ribosylglycohydrolase TERM 5631 4279364 - 4279343 - g 81 -12.3 -3.55563 | gap 1 ACCGTATTCTGGAAA TCGCGC-CGC GCC GCGCGCGCGA CGCTCAGGCAGACGG STM4068 4279021 - 4279743 + | putative regulatory protein STM4069 4279841 - 4280005 + | putative periplasmic protein STM4070 4280021 - 4280152 + | putative cytoplasmic protein STM4071 4280508 - 4280242 - | putative mannose-6-phosphate isomerase ydeV 4282198 - 4280606 - | autoinducer-2 (AI-2) kinase TERM 5632 4281995 - 4282013 + g 89 -8.9 -4.57569 | opp_overlap 4281995 4282006 TGCCTGACGGATACA CTGGCAA GCCAG TTGCCAG TTTTTGGCAAGATCA TERM 5633 4282071 - 4282044 - G 76 -12.8 -2.7556 | gap 1, overlap 4282041 4282032 AACTCCATCGAACCA GGCA-CATCCGGC ACG GCCAGATGCTGCC ATTCCGCTTGACCGA ydeW 4283245 - 4282286 - | putative transcriptional repressor ego 4283501 - 4285036 + | putative ABC-type aldose transport system ATPase component ydeY 4285030 - 4286073 + | putative sugar transport protein ydeZ 4286070 - 4287071 + | putative sugar transport protein TERM 5634 4287572 - 4287550 - g 73 -9.2 -3.88291 | opp_overlap 4287552 4287556, overlap 4287552 4287556 CATCAGGTGGACAAA GAGAAAGCGA AAG TCGCTTTCTT CTATTCCAGCCCAAC TERM 5635 4287552 - 4287570 + G 83 -11.8 -3.65812 | opp_overlap 4287550 4287552 4287556, overlap 4287556 TCAGGTGGACAAAGA GAAAGCGA AAG TCGCTTTC TTCTATTCCAGCCCA TERM 5636 4287570 - 4287552 - g 81 -11.8 -3.52906 | opp_overlap 4287552 4287556, overlap 4287550 4287556 TCAGGTGGACAAAGA GAAAGCGA AAG TCGCTTTC TTCTATTCCAGCCCA TERM 5637 4287556 - 4287566 + G 75 -6.8 -4.46073 | opp_overlap 4287556 4287552 4287550, overlap 4287552 GTGGACAAAGAGAAA GCGA AAG TCGC TTTCTTCTATTCCAG TERM 5638 4287566 - 4287556 - g 75 -6.8 -4.40003 | opp_overlap 4287552 4287556, overlap 4287552 4287550 GTGGACAAAGAGAAA GCGA AAG TCGC TTTCTTCTATTCCAG yneA 4287100 - 4288122 + | putative sugar transport protein yneB 4288151 - 4289026 + | aldolase yneC 4289106 - 4289399 + | autoinducer-2 (AI-2) modifying protein LsrG STM4080 4289409 - 4290173 + | ribulose-phosphate 3-epimerase tpiA 4291032 - 4290265 - | triosephosphate isomerase yiiQ 4291741 - 4291145 - | putative periplasmic protein yiiR 4291842 - 4292270 + | putative inner membrane protein fpr 4293123 - 4292377 - | ferredoxin-NADP reductase TERM 5639 4293199 - 4293178 - R 73 -10.9 -2.74122 | overlap 4293177 4293175 CGTCAGGAGAAAGAT TTCCAGCCC CGCG AGGCTGGAA GGCTCTAACTAACAA glpX 4294230 - 4293220 - | fructose 1,6-bisphosphatase II TERM 5640 4293482 - 4293496 + g 74 -4.9 -4.71776 | overlap 4293483 4293490 4293491 CGCGCCAGTTCCTGT TCGCC AATGC GGCGG TTTTCTTCGCTGTTG TERM 5641 4294123 - 4294141 + g 72 -3.7 -4.83169 | opp_overlap 4294109, overlap 4294125 ACGCATGGCGTTGAC CGCCGCG CCGTC CGCGGTA TTTTTATCGCCGCGT TERM 5642 4294125 - 4294139 + g 74 -8.5 -4.03995 | opp_overlap 4294109, overlap 4294123 GCATGGCGTTGACCG CCGCG CCGTC CGCGG TATTTTTATCGCCGC TERM 5643 4294294 - 4294323 + r 79 -9.3 -4.09685 | opp_overlap 4294291 4294294, overlap 4294306 GGAGGGAATAATTGA TGTGTGTGCGGAG TTGC CTCCGCACAAAGA TTTTGCCGGATGGCG glpK 4295850 - 4294342 - | glycerol kinase glpF 4296716 - 4295871 - | glycerol diffusion yiiU 4297115 - 4297354 + | putative cytoplasmic protein TERM 5644 4297574 - 4297545 - T 83 -13.7 -2.60808 | opp_overlap 4297552, overlap 4297552 ATCAGCGACAACGCA TAAAAAAGGCGCC TTAC GGCGCCTTTTTTG ATCACTCGATATCAA TERM 5645 4297552 - 4297567 + T 100 -11.8 -5.1675 | opp_overlap 4297545 4297552 ACAACGCATAAAAAA GGCGCC TTAC GGCGCC TTTTTTGATCACTCG TERM 5646 4297567 - 4297552 - T 100 -11.8 -5.3236 | opp_overlap 4297552, overlap 4297545 ACAACGCATAAAAAA GGCGCC TTAC GGCGCC TTTTTTGATCACTCG menG 4298061 - 4297576 - | ribonuclease activity regulator protein RraA menA 4299083 - 4298154 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 5647 4299119 - 4299102 - R 100 -11.3 -5.07486 | opp_overlap 4299089 TAGCGCCAATAAAAA TGGGGCT TTTC AGCCCCA TCAACAGTGATGAAA hslU 4300481 - 4299150 - | ATP-dependent protease ATP-binding subunit TERM 5648 4299981 - 4299995 + g 74 -2.1 -5.00884 | gap 1 CTCTTTATCGTCGAG CTG-GC CTTC GCGCAG TTTTTTGCGGAACGT TERM 5649 4300112 - 4300125 + g 80 -5.2 -4.87665 | CTTCCGCCAACTCTT CCGC ACGATA GCGG TTTTTCTCGATAGCC hslV 4301021 - 4300491 - | ATP-dependent protease peptidase subunit ftsN 4302087 - 4301113 - | essential cell division protein TERM 5650 4301175 - 4301185 + g 74 -3.2 -4.96468 | TCAGACGGTTAATGG TGCT GTC GGCA TTTTCTTTACCTTTC TERM 5651 4301375 - 4301397 + g 70 -6.8 -4.11216 | overlap 4301391 GCCTTCGGCGCTTCA GGCGCGCGCG TAA TGGGCGCGGC TTTTGGCGCTGCCGC TERM 5652 4301594 - 4301624 + g 82 -11 -3.77607 | overlap 4301595 GTTTGAGCCCACTGC TGCTGCTGCGCCTG ACG CTGGCGCTGTAGCG TTTGCTGGCGTTGTT TERM 5653 4301595 - 4301623 + g 75 -12.3 -2.85841 | overlap 4301594 TTTGAGCCCACTGCT GCTGCTGCGCCTG ACG CTGGCGCTGTAGC GTTTGCTGGCGTTGT cytR 4303206 - 4302181 - | DNA-binding transcriptional regulator CytR TERM 5654 4302322 - 4302308 - G 80 -9.2 -4.20696 | opp_overlap 4302308 4302307 CGACCAATGTCAAAA CGCGGC TGC GCCACG GTTGTCAACGGAGGG priA 4305559 - 4303361 - | primosome assembly protein PriA TERM 5655 4304666 - 4304678 + g 74 -4.7 -4.81249 | opp_overlap 4304666 CGTGCCGATGACAAT CGCCG CTT CGCCG TTTTTCGCTTTCAGC TERM 5656 4305848 - 4305833 - g 71 -6.1 -4.28361 | GTAATGTTATCAAAA CCCAC TCTACC GTGGG TCACGACCTGAACCT rpmE 4305763 - 4305975 + | 50S ribosomal protein L31 TERM 5657 4305987 - 4306016 + T 100 -12.3 -4.38712 | opp_overlap 4305995, overlap 4305995 4306015 ATAAGTTACCGCCAG AAAAAAAAGCGCC GCAG GGCGCTTTTTTTG TTTTCTAGGGATAAC TERM 5658 4305995 - 4306008 + T 100 -9.5 -6.14618 | opp_overlap 4305995, overlap 4305987 CCGCCAGAAAAAAAA GCGCC GCAG GGCGC TTTTTTTGTTTTCTA TERM 5659 4306008 - 4305995 - T 100 -9.5 -5.93809 | opp_overlap 4305987 4305995 CCGCCAGAAAAAAAA GCGCC GCAG GGCGC TTTTTTTGTTTTCTA STM4097 4306683 - 4306021 - | putative outer membrane lipoprotein TERM 5660 4306839 - 4306862 + r 100 -16.8 -4.71222 | opp_overlap 4306837 TACGTTTTAACCATT CAGGCGGAAG TTAG CTTCCGCCTG TTTTACTTTTACTAT STM4098 4308674 - 4306884 - | putative arylsulfate sulfotransferase TERM 5661 4307041 - 4307009 - G 73 -10.6 -3.36327 | opp_overlap 4307006, overlap 4307015 TGACTTCATCCAGAA CGGAAACGATCGGT TTTGT ACCGCTCATTCCCG CTGTGGCCGAGTACA TERM 5662 4307794 - 4307811 + g 74 -2.1 -5.07652 | gap 1, overlap 4307786 4307797 GTATTGATGGTGTAT TTA-CCAT TTA ATGGATAA TTTTCTTTTGCGACA TERM 5663 4309121 - 4309095 - R 83 -6.5 -5.055 | opp_overlap 4309095 4309096, overlap 4309096 4309097 GGAATCGTTAAAAAA GCGCGGCCAGA GGCGT TCTGACCGCAT GCTTTGCTATCAGTA TERM 5664 4309120 - 4309096 - R 75 -10 -3.62577 | opp_overlap 4309095 4309096, overlap 4309095 4309097 GAATCGTTAAAAAAG CGCGGCCAGA GGCGT TCTGACCGCA TGCTTTGCTATCAGT TERM 5665 4309119 - 4309097 - R 74 -11.3 -2.76823 | opp_overlap 4309096 4309095, overlap 4309096 4309095 AATCGTTAAAAAAGC GCGGCCAGA GGCGT TCTGACCGC ATGCTTTGCTATCAG metJ 4309448 - 4309131 - | transcriptional repressor protein MetJ TERM 5666 4310564 - 4310535 - g 74 -2.1 -5.00616 | gap 1 CCGTTGGTGAAAAAA CTGTATCATCCGTC GCT GCCGGAAAAT-CAG GGGCATGAAATTGCC metB 4309713 - 4310873 + | cystathionine gamma-synthase TERM 5667 4311919 - 4311902 - g 77 -8.3 -4.17657 | GACCACATTTTAAAA CGGGCGC AGGT GCGTCCG CTGGCGGTGGGCGTG metL 4310876 - 4313308 + | bifunctional aspartate kinase II/homoserine dehydrogenase II STM4102 4314281 - 4313424 - | putative inner membrane protein STM4103 4316641 - 4315517 - | putative cytoplasmic protein TERM 5668 4315654 - 4315640 - G 77 -8.5 -4.2123 | TAGCCAGGTAACAAA GCGGC GACTG GCCGC CAGATTAACGGCGAC TERM 5669 4317752 - 4317736 - g 77 -3.6 -5.06414 | CGGCTGGAACAAAAA GCTCGA TAAAG TCGTGC AGCAAACGGTGGCTC TERM 5670 4317824 - 4317839 + G 87 -8.2 -4.56597 | overlap 4317798 TCGCTGGGGAATCTG GCGGCG GATG CGCTGC TTTTTACGGCGGGGA STM4104 4316777 - 4318333 + | putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase TERM 5671 4318396 - 4318382 - f 76 -5 -4.75472 | opp_overlap 4318373, overlap 4318377 GTGACATGAAGAAAA TTCAAC TTT GCTGAA TATTCCTCATTCTTT metF 4318528 - 4319418 + | 5,10-methylenetetrahydrofolate reductase TERM 5672 4319425 - 4319440 + F 87 -10.4 -4.1711 | opp_overlap 4319419 GGTTTATAACCTCCA GCTCCC TGCC GGGAGC TTTATTACAACTCAT TERM 5673 4320238 - 4320225 - g 83 -9.5 -4.08692 | opp_overlap 4320234 GAAGCGCTGGCAAAA GCGCC GCTG GGCGC GACCGAGATGGGCCT katG 4319583 - 4321763 + | hydroperoxidase TERM 5674 4321779 - 4321810 + T 100 -15.2 -4.39989 | TCTGACAGGTTAATT CGTCAGCGGCTGCT ATTC GGTAGTCGCTGACG TTTTCCTCGTTTAAT yijF 4322444 - 4321821 - | putative periplasmic protein TERM 5675 4322537 - 4322515 - R 73 -2 -5.24129 | opp_overlap 4322515, overlap 4322533 4322535 GTGCGTGATAAAAAA GTCTATTTCA GGA CAAAATGGAC TGATTCCAGGCTATG TERM 5676 4322691 - 4322668 - R 100 -14 -3.67976 | opp_overlap 4322660 4322668 GTCAGCAAGCTGAAA TACTCCTGAC TATC GTCAGGAGTA TTGCTCAGACCTTAT TERM 5677 4322668 - 4322691 + r 86 -14 -3.15758 | opp_overlap 4322668, overlap 4322660 GTCAGCAAGCTGAAA TACTCCTGAC TATC GTCAGGAGTA TTGCTCAGACCTTAT gldA 4323806 - 4322703 - | glycerol dehydrogenase TERM 5678 4323148 - 4323158 + g 81 -6.8 -4.70626 | overlap 4323139 ACGTGCTGTTCGGCG GCCA ACA TGGC TTTTTCGCCTTCTTC talC 4324480 - 4323818 - | fructose-6-phosphate aldolase TERM 5679 4324327 - 4324337 + g 77 -8.2 -4.09685 | opp_overlap 4324319, overlap 4324319 ATAAAGTGCCTTCTT CGCC GAT GGCG TTTTGCAGCCTGGGC ptsA 4326992 - 4324491 - | PEP-protein phosphotransferase TERM 5680 4325826 - 4325876 + g 87 -13.8 -3.18264 | overlap 4325811 4325871 4325873 TTGCGCCTCGACGGA GTGCGCGATGTTGGCGGCGACCTC CAT GCGGATGCCGTCAGCGGTGCGCGC TTCCTGGGTCAGCCA TERM 5681 4326124 - 4326136 + g 73 -6.3 -4.42788 | opp_overlap 4326124 CTTTTTAACAGCAGA CCTTT GAG AAAGG TTTTATCCAGTTCGA TERM 5682 4326836 - 4326847 + g 74 -7.2 -4.1196 | opp_overlap 4326836, overlap 4326819 4326826 4326822 TGTCGGTGCCAATCA GCGC CAGC GCGC TTTTGGCGCTGCCTT TERM 5683 4327162 - 4327172 + H 70 -2.4 -4.93898 | TTTCAGAAGTTATGA AGCG GAT CGCA TTTTTATACTGATAT frwC 4327301 - 4328380 + | putative fructose-like permease EIIC subunit 2 frwB 4328395 - 4328715 + | putative fructose-like phosphotransferase EIIB subunit 2 TERM 5684 4328738 - 4328771 + F 72 -10.3 -2.91593 | opp_overlap 4328725, overlap 4328737 ATGCCCGATGGCGCA AGTTTATCGGGCCTG CTCA CAGGCCCGATAAGAG ATTTATGCCGCCATC TERM 5685 4328937 - 4328957 + GF 73 -10.4 -3.00476 | gap 1 GAACCGGTCATTTTG CGCCG-CGC CAAA GCGACGGCG TATATCCTTGAACAT pflD 4328814 - 4331111 + | putative formate acetyltransferase 2 TERM 5686 4331534 - 4331558 + GF 79 -12.2 -2.80994 | gap 1, opp_overlap 4331534 CTTGTGCTATTGAAA CGGCTGG-CGA TACG TCGGCCAGCCG TCTACTGCCGTTGGC TERM 5687 4331558 - 4331534 - gf 88 -12.2 -3.64703 | gap 1, opp_overlap 4331534 CTTGTGCTATTGAAA CGGCTGG-CGA TACG TCGGCCAGCCG TCTACTGCCGTTGGC TERM 5688 4331688 - 4331711 + GF 83 -10.4 -3.69434 | gap 1, overlap 4331692 ACGGTTACTGGTTAG CGAGGGAATCA CGG TGA-TCCCTCG TTTGCCGTTGATTCC TERM 5689 4331806 - 4331793 - gf 81 -8.1 -4.27441 | ATCATTAGGAATAAA GCAGG TTCA CCTGC TACCGTTTCATCAGT pflC 4331077 - 4331955 + | pyruvate formate lyase II activase frwD 4331957 - 4332310 + | putative fructose-like phosphotransferase EIIB subunit 3 yijO 4333148 - 4332297 - | putative regulatory protein TERM 5690 4333228 - 4333240 + r 77 -10.5 -3.30124 | opp_overlap 4333213, overlap 4333217 TTATTGCCGGATAGC GGCGC TTT GCGCC TTATCCGGACTACGG yijP 4335042 - 4333309 - | hypothetical protein TERM 5691 4335232 - 4335244 + r 73 -7.7 -4.19238 | overlap 4335211 CCCACATAACTGCGT GAGAG CGG CTCTC TTTTGGCGTTAGCCG ppc 4337904 - 4335253 - | phosphoenolpyruvate carboxylase TERM 5692 4336626 - 4336646 + g 82 -11.1 -3.78775 | opp_overlap 4336622, overlap 4336614 GGATCAGGAAGGCCT GCTTGTCGG CTT CCGACCAGC TTTCGTAGTCGCCAA TERM 5693 4337611 - 4337622 + g 74 -7.2 -4.08945 | overlap 4337612 4337613 4337616 CACTTCCGGGTTGCT GGCG GCTT CGCC TTTTGGCGAAATGCT TERM 5694 4338087 - 4338069 - R 71 -7.4 -3.85698 | opp_overlap 4338068 GCCGTCTTTTATAAA GCCACG TAAAACC CGTGGC GTCAATTACTGCGAA argE 4339424 - 4338273 - | acetylornithine deacetylase argC 4339513 - 4340517 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 5695 4340738 - 4340711 - g 75 -4 -4.89063 | gap 1, opp_overlap 4340731, overlap 4340713 CCAGTGAAAAAGAAA GA-CGGCCTGCGC GTG ACGCCTGCCGATC AGATTGGCATCATTA argB 4340528 - 4341301 + | acetylglutamate kinase TERM 5696 4341742 - 4341724 - g 87 -8.1 -4.57569 | TCAGTTGGGTAAAAA GCTGCAC ACCGG GCGCAGC CGTAACGATCAAGTG argH 4341419 - 4342795 + | argininosuccinate lyase TERM 5697 4342829 - 4342854 + F 85 -5.9 -5.40072 | opp_overlap 4342826 CATCAGGCAATACTG CCCGGCCGAGC ATCA GCGACGCCGGG TTTTTTTACGCAAAA TERM 5698 4342891 - 4342875 - f 100 -13.7 -6.11644 | TTACGCAAAAAAAAA GCGGACC AGA GGTCCGC AAAAGTTCACGTTGG oxyR 4343080 - 4343997 + | DNA-binding transcriptional regulator OxyR udhA 4345380 - 4343980 - | soluble pyridine nucleotide transhydrogenase TERM 5699 4345040 - 4345028 - G 71 -4.7 -4.63218 | opp_overlap 4345034, overlap 4345029 TGTTCGTCAATAAAA TGGGC GTT GCCCT GCAATATTTCACAGT yijC 4345579 - 4346214 + | DNA-binding transcriptional repressor FabR yijD 4346230 - 4346589 + | hypothetical protein TERM 5700 4346594 - 4346633 + T 76 -7.8 -4.2803 | gap 1, opp_overlap 4346616, overlap 4346595 4346598 CCGCGGAATAGTGTG CGAATGCCGGATGG-CGGT ATA ACCGGCCATCCGACGTACA TTTTACCTTGCGGTG TERM 5701 4346595 - 4346632 + T 77 -11.3 -3.16336 | gap 1, opp_overlap 4346616, overlap 4346594 4346598 CGCGGAATAGTGTGC GAATGCCGGATGG-CGGT ATA ACCGGCCATCCGACGTAC ATTTTACCTTGCGGT TERM 5702 4346598 - 4346629 + T 77 -11.6 -2.77861 | gap 1, opp_overlap 4346616, overlap 4346595 4346594 GGAATAGTGTGCGAA TGCCGGATGG-CGGT ATA ACCGGCCATCCGACG TACATTTTACCTTGC trmA 4347736 - 4346636 - | tRNA (uracil-5-)-methyltransferase TERM 5703 4346800 - 4346853 + g 74 -10.3 -3.58343 | GTGGATAAGCCTGCA CCATTTTTTCCGTTTCGCTGTCCAG ACCG CTGCGCGGCGGATCGACAAAAATGG TTTCGCACTGATAGC TERM 5704 4347083 - 4347069 - G 85 -4.2 -5.27938 | AGCGCTAAAGAAAAA TTGCCG TTG CCGCAA TACAACTCAAGCAGA TERM 5705 4348221 - 4348233 + GH 74 -10.5 -3.29461 | AACCGTTTTCAGCAG CCGCG CAG CGCGG TTCTGGCGCCCGTTA btuB 4348110 - 4349954 + | vitamin B12/cobalamin outer membrane transporter TERM 5706 4349963 - 4349996 + GF 71 -10.3 -2.64354 | gap 1, overlap 4349962 CTTCTGAACCACGTC CCACCG-TGCTGGTAT TTG ATTCCGGCGTCGGTGG ATTGTCGGTCTATGA TERM 5707 4350010 - 4350042 + GF 73 -10.5 -3.09349 | opp_overlap 4350017 GGATTGTCGGTCTAT GATGAGATTCGGCGG CTC CTGCCGGATCTCCAC TATATATATGCTTTC murI 4349899 - 4350750 + | glutamate racemase TERM 5708 4350934 - 4350918 - f 76 -5.1 -4.75954 | AAAAGCGAAAATAAA CGCTTGA CTC TGAAGCG GGAAAGCGTAATATG TERM 5709 4353065 - 4353028 - f 77 -3.4 -5.14563 | opp_overlap 4353030 4353058, overlap 4353030 GTGTTTACGAAAAAA TACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 5710 4353128 - 4353104 - f 71 -8 -3.93061 | gap 1, opp_overlap 4353104 4353111, overlap 4353108 4353114 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5711 4353682 - 4353670 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5712 4356538 - 4356497 - f 100 -17.5 -3.76224 | opp_overlap 4356502 4356507, overlap 4356502 CTGCCAGGCATCAAA TAAAACGAAAGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTT GTCTGTTTCTGCCGG TERM 5713 4356533 - 4356502 - f 100 -17.4 -4.9448 | opp_overlap 4356502 4356507, overlap 4356497 AGGCATCAAATAAAA CGAAAGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTTGTCTGTTTCT TERM 5714 4356502 - 4356533 + F 100 -19.6 -5.1634 | opp_overlap 4356502 4356497, overlap 4356507 AGGCATCAAATAAAA CGAAAGGCCCTGTC GGAA GACAGGGCCTTTTG TTTTTGTCTGTTTCT TERM 5715 4356507 - 4356528 + F 100 -15.9 -5.38839 | opp_overlap 4356502 4356497, overlap 4356502 TCAAATAAAACGAAA GGCCCTGTC GGAA GACAGGGCC TTTTGTTTTTGTCTG murB 4356672 - 4357700 + | UDP-N-acetylenolpyruvoylglucosamine reductase birA 4357697 - 4358659 + | biotin--protein ligase TERM 5716 4358685 - 4358666 - T 84 -7.8 -4.87626 | opp_overlap 4358667, overlap 4358667 GCCGAATAGTAAAAA GGGGGAGT CGGT ACTCCCCT TTTTTCTGTTATTTC TERM 5717 4358684 - 4358667 - T 82 -11.3 -3.51853 | opp_overlap 4358667, overlap 4358666 CCGAATAGTAAAAAG GGGGAGT CGGT ACTCCCC TTTTTTCTGTTATTT TERM 5718 4358667 - 4358684 + T 100 -11.3 -5.57729 | opp_overlap 4358667 4358666 CCGAATAGTAAAAAG GGGGAGT CGGT ACTCCCC TTTTTTCTGTTATTT coaA 4359644 - 4358694 - | pantothenate kinase TERM 5719 4358824 - 4358837 + g 70 -6.7 -4.10744 | opp_overlap 4358821 4358817 TTCCAAAGCGAAGTT GCTGT ATTA ACAGC TTCTTCTTTAGATAA TERM 5720 4359200 - 4359210 + g 78 -2.4 -5.1963 | GCATATCATACGATT CGGG GAA CCCC TTTTTCTTCATTAAC STM4141 4360026 - 4359853 - | putative cytoplasmic protein TERM 5721 4360286 - 4360274 - H 73 -7.7 -4.15222 | opp_overlap 4360270 ACCGGCTCGAATAAA GAGAG TTT CTCTC GATATTCAGTGCAGA tuf 4360603 - 4361787 + | elongation factor Tu TERM 5722 4361839 - 4361822 - f 95 -11.3 -4.65747 | opp_overlap 4361822 CAATGCGCAATAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5723 4361822 - 4361839 + F 95 -11.3 -4.60924 | opp_overlap 4361822 CAATGCGCAATAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5724 4362309 - 4362323 + G 77 -11.4 -3.52896 | CCACGCTGATCGTCG CTGCGG TTA CCGCAG TTATGTCACTGATCC secE 4362017 - 4362400 + | preprotein translocase subunit SecE nusG 4362402 - 4362947 + | transcription antitermination protein NusG TERM 5725 4362982 - 4362964 - f 91 -7.4 -5.14563 | opp_overlap 4362968 GCTGCGATCAAAAAA GCAGCGAT CTA ATCGTTGC ATAGGGCGCGAAATT TERM 5726 4362987 - 4363015 + F 100 -17.6 -5.35224 | CTAATCGTTGCATAG GGCGCGAAATTG ACATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 5727 4363429 - 4363406 - g 81 -8.2 -4.26681 | gap 1 ACAAAGTAGGTAAAA TTTCCCGC-GC TCA GCTGCAGGAAA TCGCGCAGACCAAAG rplK 4363105 - 4363533 + | 50S ribosomal protein L11 TERM 5728 4364080 - 4364040 - g 74 -3.1 -4.98255 | opp_overlap 4364048 CCGTAACGACAAAAA CGGCATCATCCACACCACC ATC GGTAAAGTGGACTTTGACG CTGACAAACTGAAAG rplA 4363537 - 4364241 + | 50S ribosomal protein L1 rplJ 4364661 - 4365158 + | 50S ribosomal protein L10 TERM 5729 4365151 - 4365164 + F 74 -8.1 -3.89695 | opp_overlap 4365151 4365150 GCGATGCAAAAGAAG CTGCG TAAT CGCAG TTGTCTTTATCAAGC rplL 4365225 - 4365590 + | 50S ribosomal protein L7/L12 TERM 5730 4365630 - 4365655 + F 100 -17.7 -4.64766 | opp_overlap 4365623 4365621 4365620, overlap 4365601 AGAAATCAGGCTGAT GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGCTGTAAG TERM 5731 4365874 - 4365857 - f 71 -7.7 -3.86524 | ATAGTGTTGCACAAA CTGTCCC CCGC AGGACAG ATGGGTCGACTTGTC TERM 5732 4368950 - 4368934 - g 76 -2.9 -5.10033 | overlap 4368935 CGAAGAGAAACAAAA TCAGCTG GAA CAACTGG CTGAGCAGTATGACG TERM 5733 4369543 - 4369508 - g 74 -10.4 -3.55815 | gap 1, opp_overlap 4369510, overlap 4369539 AAAGAGCTGCTGAAA CTGGGCGACCTG-CCGA CCT CCGGTCAGATCACCCTG TTCGATGGCCGTACG rpoB 4365908 - 4369936 + | DNA-directed RNA polymerase subunit beta TERM 5734 4369955 - 4369984 + F 90 -13.6 -3.4252 | opp_overlap 4369951 4369949, overlap 4369956 TCGCTCAAACAGGTC ACTGGTGTCGGG GTAAAA CCCGACACCAGA TTGTGCTAACTCCGA TERM 5735 4369956 - 4369983 + F 100 -17.1 -2.65298 | opp_overlap 4369951 4369949, overlap 4369955 CGCTCAAACAGGTCA CTGGTGTCGGG GTAAAA CCCGACACCAG ATTGTGCTAACTCCG TERM 5736 4371743 - 4371723 - g 77 -11.1 -3.5882 | opp_overlap 4371723 4371722 CACACCAGCCTGAAA GACACGACC GTT GGTCGCGCC ATTCTGTGGATGATC TERM 5737 4371978 - 4371963 - g 78 -2.6 -5.24531 | gap 1, overlap 4371966 ATCCCGGAGAAAAAA CACGAGA TCA TCTC-TG AGGCGGAAGCTGAAG rpoC 4370013 - 4374236 + | DNA-directed RNA polymerase subunit beta' TERM 5738 4374244 - 4374273 + F 80 -12.9 -2.53164 | opp_overlap 4374245, overlap 4374243 ACGAGTAATCGTTAA ATGGTGGAGGGGT ATTT ATCCCTCCACCAG CTTCATGCTGGATAC TERM 5739 4374272 - 4374245 - f 93 -14.2 -3.61764 | opp_overlap 4374244 4374243 CGAGTAATCGTTAAA TGGTGGAGGGGT ATTT ATCCCTCCACCA GCTTCATGCTGGATA STM4155 4374278 - 4374601 + | putative inner membrane protein STM4156 4374951 - 4374607 - | putative cytoplasmic protein STM4157 4375350 - 4376360 + | putative cytoplasmic protein TERM 5740 4376550 - 4376566 + F 70 -2.3 -4.99043 | opp_overlap 4376544, overlap 4376552 CTTAAATAATTTAAT TGGTTAT TAA ATAACAA TTTTATTTATACAGA STM4158 4376683 - 4376871 + | putative cytoplasmic protein TERM 5741 4376946 - 4376969 + T 89 -8.8 -4.67234 | opp_overlap 4376946 GACAAAATAAAAAAA CGGGAGGTCG ATAA CAATCTCCCG TTTTTCGCATTACGT TERM 5742 4376969 - 4376946 - T 100 -8.8 -6.14618 | opp_overlap 4376946 GACAAAATAAAAAAA CGGGAGGTCG ATAA CAATCTCCCG TTTTTCGCATTACGT thiH 4378155 - 4377022 - | thiamine biosynthesis protein ThiH TERM 5743 4377168 - 4377185 + g 89 -9.1 -4.56597 | CCGGATGATCGTCAG CGTAGCC GCCG GGCTGCG TTTTTGAGAAGGCGC thiG 4378922 - 4378152 - | thiazole synthase STM4161 4379124 - 4378924 - | sulfur carrier protein ThiS thiF 4379863 - 4379105 - | thiamine biosynthesis protein ThiF thiE 4380491 - 4379856 - | thiamine-phosphate pyrophosphorylase thiC 4382386 - 4380491 - | thiamine biosynthesis protein ThiC TERM 5744 4380658 - 4380681 + g 73 -8.8 -3.80573 | AGCAGAAGTGGGCAA CCTTGCCGGA CTCC TGCGGCAGGG TTTCATCGTGATAAG rsd 4383238 - 4382750 - | anti-RNA polymerase sigma 70 factor nudC 4383331 - 4384104 + | NADH pyrophosphatase hemE 4384145 - 4385209 + | uroporphyrinogen decarboxylase TERM 5745 4385628 - 4385618 - g 74 -2.4 -5.00616 | opp_overlap 4385618 GGCGTGGCGAAAAAA CGGC TAT GCGG TAAATTTGAACCACT nfi 4385219 - 4385890 + | endonuclease V yjaG 4385932 - 4386522 + | putative cytoplasmic protein TERM 5746 4386924 - 4386942 + G 89 -8.8 -4.59342 | opp_overlap 4386921 AGAAATCAAAATCGC CGCCGCTA ACG TACCGGCG TTTGTTTCTGGTAAA hupA 4386709 - 4386981 + | transcriptional regulator HU subunit alpha TERM 5747 4387011 - 4387026 + G 95 -10.4 -4.64844 | opp_overlap 4387011 AACAGTTTTATCGAA GGGGCT CATC AGCCCC TTTTGTCTGTCTGGC yjaH 4386993 - 4387685 + | putative inner membrane protein TERM 5748 4387716 - 4387693 - T 80 -12.4 -3.08679 | opp_overlap 4387687 GCTTTTGATGGAATA CCGGATGGCG AAGC CGCCATTCGG CAAACATGCTTTACC zraP 4388182 - 4387727 - | zinc resistance protein TERM 5749 4388335 - 4388286 - H 84 -8.1 -4.58395 | opp_overlap 4388297 4388309, overlap 4388287 4388288 4388297 TTCAGGCGGCAAAAA GCGAGTAAAAATGACTCGC ATAACCCGCCTG GCGAGTCATTTTTACCCAT CCGTATCCGAAAGGG TERM 5750 4388334 - 4388287 - H 82 -11.6 -3.34716 | opp_overlap 4388297 4388309, overlap 4388286 4388288 4388297 TCAGGCGGCAAAAAG CGAGTAAAAATGACTCGC ATAACCCGCCTG GCGAGTCATTTTTACCCA TCCGTATCCGAAAGG TERM 5751 4388333 - 4388288 - H 81 -12.9 -2.60508 | opp_overlap 4388297 4388309, overlap 4388287 4388286 4388297 CAGGCGGCAAAAAGC GAGTAAAAATGACTCGC ATAACCCGCCTG GCGAGTCATTTTTACCC ATCCGTATCCGAAAG TERM 5752 4388324 - 4388297 - H 73 -4.2 -4.79667 | opp_overlap 4388297 4388309, overlap 4388288 4388287 4388286 AAAAGCGAGTAAAAA TGACTCGC ATAACCCGCCTG GCGAGTCA TTTTTACCCATCCGT TERM 5753 4389061 - 4389095 + G 89 -3.4 -5.44119 | overlap 4389070 TGATTGTTTTGTCTG CGTTAGCGGCGGTGCT GTT GGCAACGTTACTGGCG TTTTTTTGGCATCAG TERM 5754 4389643 - 4389666 + G 78 -6.7 -4.64144 | gap 1, opp_overlap 4389639 4389643, overlap 4389662 ATAGCGGGAAAGGGA TCGCC-CCGG ATCAG CTGGAGGCGA TTTTTACGCCTTATT hydH 4388436 - 4389833 + | sensor protein ZraS TERM 5755 4391115 - 4391088 - g 100 -9.7 -5.0538 | opp_overlap 4391088 CGGCACTGGAAAAAA CGGGCGGCAAC AAAACG GAAGCCGCCCG TCAATTGGGCATTAC hydG 4389839 - 4391164 + | transcriptional regulatory protein ZraR purD 4392450 - 4391161 - | phosphoribosylamine--glycine ligase purH 4394051 - 4392462 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 5756 4392942 - 4392988 + g 70 -6.5 -4.09511 | gap 1, overlap 4392943 4392957 4392979 4392981 CGGCACACGCTGTGC CCACTGACCGCAGGTCAGAACG CGAA CGTTCTGTTTGGCGG-CGGTGA TTTTCAGCGCCTCTT TERM 5757 4392957 - 4392974 + g 71 -9.9 -3.5393 | overlap 4392943 4392942 CCACTGACCGCAGGT CAGAACG CGAA CGTTCTG TTTGGCGGCGGTGAT TERM 5758 4394081 - 4394124 + r 85 -12.6 -3.37474 | opp_overlap 4394082 4394084 4394119, overlap 4394082 4394119 4394121 ATTTGACGATTACAG AGAGCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGCCCC TTATGGGGTATTCTC TERM 5759 4394082 - 4394123 + r 90 -16.1 -2.62003 | opp_overlap 4394082 4394084 4394119, overlap 4394081 4394119 4394121 TTTGACGATTACAGA GAGCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGCCC CTTATGGGGTATTCT TERM 5760 4394123 - 4394082 - R 100 -20.5 -2.96216 | opp_overlap 4394082 4394081 4394119 4394121, overlap 4394084 4394119 TTTGACGATTACAGA GAGCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGCCC CTTATGGGGTATTCT TERM 5761 4394121 - 4394084 - R 100 -19.5 -3.03443 | opp_overlap 4394082 4394081 4394119, overlap 4394082 4394119 TGACGATTACAGAGA GCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGC CCCTTATGGGGTATT TERM 5762 4394168 - 4394186 + r 83 -2.4 -5.63236 | opp_overlap 4394166, overlap 4394172 ATTGTAACGAAAACG TTTGCG CAACGCT CGCGAA TTTTTCTTTTTAAAT TERM 5763 4394464 - 4394450 - R 76 -4.2 -5.0916 | opp_overlap 4394450, overlap 4394451 4394458 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 5764 4394496 - 4394484 - R 71 -7.7 -4.00532 | overlap 4394494 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCAACGGTG TERM 5765 4396453 - 4396488 + r 77 -9.2 -4.00532 | opp_overlap 4396455 4396464 AGTCACCTGCCTTAA TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA TTTGCTCTTTAAAAA TERM 5766 4396552 - 4396528 - R 71 -8 -3.93061 | gap 1, opp_overlap 4396528 4396535, overlap 4396532 4396538 AGCTGAAAATTGAAA CACAGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5767 4397106 - 4397094 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5768 4399962 - 4399921 - R 93 -11.7 -3.76224 | opp_overlap 4399926 4399931, overlap 4399925 4399926 4399931 CTGCCAGGCATCAAA TTAAGCAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTA TCTGTGGTCTGTCGG TERM 5769 4399958 - 4399925 - R 88 -12.5 -3.57418 | opp_overlap 4399926 4399931, overlap 4399921 4399926 4399931 CAGGCATCAAATTAA GCAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGT TTTATCTGTGGTCTG TERM 5770 4399957 - 4399926 - R 90 -16 -2.73969 | opp_overlap 4399926 4399931, overlap 4399925 4399921 4399931 AGGCATCAAATTAAG CAAAAGGCTCAGTC GAAA GACTGGGCCTTTTG TTTTATCTGTGGTCT TERM 5771 4399926 - 4399957 + r 100 -18.2 -4.63586 | opp_overlap 4399925 4399921 4399926 4399931, overlap 4399931 AGGCATCAAATTAAG CAAAAGGCTCAGTC GAAA GACTGGGCCTTTTG TTTTATCTGTGGTCT TERM 5772 4399931 - 4399952 + r 100 -12.3 -5.24647 | opp_overlap 4399926 4399925 4399921 4399931, overlap 4399926 TCAAATTAAGCAAAA GGCTCAGTC GAAA GACTGGGCC TTTTGTTTTATCTGT TERM 5773 4399952 - 4399931 - R 90 -10.1 -4.5287 | opp_overlap 4399931 4399926, overlap 4399926 4399925 4399921 TCAAATTAAGCAAAA GGCTCAGTC GAAA GACTGGGCC TTTTGTTTTATCTGT TERM 5774 4400017 - 4400003 - R 71 -7.8 -3.99324 | opp_overlap 4400003 CCTGAGGAGGAGAAA TCCGCC GGG AGCGGA TTTGAACGTTGCGCA TERM 5775 4400127 - 4400092 - R 84 -10.4 -4.015 | opp_overlap 4400100, overlap 4400100 CCAGGCATCAAACAA GTGAAGAAGCCCGTCC GTCA GGACGGGCTTTTTTGC GTGTGCGGTAACTGT TERM 5776 4400119 - 4400100 - R 100 -15 -3.7956 | opp_overlap 4400100, overlap 4400092 CAAACAAGTGAAGAA GCCCGTCC GTCA GGACGGGC TTTTTTGCGTGTGCG TERM 5777 4400100 - 4400119 + r 100 -15 -5.1287 | opp_overlap 4400092 4400100 CAAACAAGTGAAGAA GCCCGTCC GTCA GGACGGGC TTTTTTGCGTGTGCG TERM 5778 4400206 - 4400162 - R 79 -11.4 -3.30243 | gap 1, opp_overlap 4400162 4400161, overlap 4400152 4400149 ATGTAGGCCTGATAA GCGCAGC-GCCATCAGGCAAC CTGC ACCGCCGGATGGCCGCTTCGC CTTATCCGGCCTACA yjaB 4400684 - 4400247 - | hypothetical protein metA 4400841 - 4401770 + | homoserine O-succinyltransferase TERM 5779 4401816 - 4401831 + F 100 -10.4 -5.63517 | opp_overlap 4401816 CAGCATGTTGAATCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA TERM 5780 4401831 - 4401816 - f 71 -10.4 -2.72661 | opp_overlap 4401816 CAGCATGTTGAATCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA aceB 4402039 - 4403640 + | malate synthase TERM 5781 4403876 - 4403861 - g 90 -5.4 -5.15969 | overlap 4403872 GGTGAAGCGAAAAAA GGCTAT ATCA ACAGCC TTGGCGCGCTGACCG aceA 4403672 - 4404976 + | isocitrate lyase TERM 5782 4405413 - 4405440 + G 90 -8.4 -4.72188 | overlap 4405416 TTGCCGGTTATTTGA CCACCGCTCG TTAACACC CGAGCGGTTG TTTATTTTCAGTTCG TERM 5783 4405416 - 4405437 + G 85 -8.7 -4.44301 | overlap 4405413 CCGGTTATTTGACCA CCGCTCG TTAACACC CGAGCGG TTGTTTATTTTCAGT TERM 5784 4405728 - 4405740 + G 82 -5.5 -5.08088 | opp_overlap 4405721 4405719 ATTAACCACACCTGA CGGTA CGC TGCCG TTTTTATTGCCGATT aceK 4405078 - 4406829 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein STM4186 4407200 - 4406793 - | putative cytoplasmic protein TERM 5785 4406886 - 4406874 - G 80 -4.7 -5.00616 | overlap 4406875 CTCGCGCTCAAAAAA GGCCC GGT GTGCC GCTTGCCAGTACGCC TERM 5786 4407012 - 4406959 - G 83 -9.6 -4.08767 | gap 3, opp_overlap 4407011 CTCATCTCGTTAAAA CGGATCAGCCTGAGCGCCAGCGTGCGT ATG ACGCACAC-GGCG-TC-GCCTGTGCCG TTGAGCACAATGTGA iclR 4408035 - 4407211 - | transcriptional repressor IclR TERM 5787 4407565 - 4407544 - G 80 -5.1 -4.83615 | gap 1, overlap 4407546 GAGCTGTGATAAAAA CGCCT-TGCC CGC GCCAGAGGCG TGCATGGGCAGCTTG TERM 5788 4409492 - 4409476 - g 75 -6.5 -4.41237 | overlap 4409478 ATCAAAGAAGAGAAA TACAGCG AAG CGCTGGA TGTCGCCCGTCAGCA TERM 5789 4409490 - 4409478 - g 73 -9.1 -3.79177 | overlap 4409476 CAAAGAAGAGAAATA CAGCG AAG CGCTG GATGTCGCCCGTCAG TERM 5790 4409544 - 4409593 + G 72 -12.1 -2.72344 | gap 1, opp_overlap 4409544, overlap 4409555 4409556 TATTGATATCAATAT GGATGAGGGGATGCTCGA-CGCCG AAG CGGCGATGGTGCGTTTCCTCAGCC TGATTGCCGGTGAGC TERM 5791 4410006 - 4409989 - g 74 -8.3 -3.93262 | opp_overlap 4409988 4410003 TGCGAAGACATCAAA CGCGAGC TGCC GCACGCG CTGATCTCCGGCGGC TERM 5792 4411070 - 4411033 - g 100 -9 -5.0133 | gap 1, overlap 4411034 CACGCCCGCAAAAAA CCGCGCA-CGCCGCCGG TCACG CTGGAGGCGGCGCGCGA TAACGATCTGGCATT TERM 5793 4411067 - 4411034 - g 77 -11.6 -3.60316 | gap 1, overlap 4411033 ACGCCCGCAAAAAAC CGCGCACGCCGCCGG TCACG CTGGAGGCG-GCGCG CGATAACGATCTGGC metH 4408339 - 4412022 + | B12-dependent methionine synthase TERM 5794 4412051 - 4412081 + F 83 -9 -4.20918 | opp_overlap 4412053 4412055 4412058, overlap 4412053 4412055 4412058 CACTTTTCCTTACAA CATACAAGGCACTC ATT GGGTGCCTTGTCTC TTTCTTACAATTAAA TERM 5795 4412053 - 4412079 + F 93 -11.6 -3.70139 | opp_overlap 4412053 4412055 4412058, overlap 4412051 4412055 4412058 CTTTTCCTTACAACA TACAAGGCACTC ATT GGGTGCCTTGTC TCTTTCTTACAATTA TERM 5796 4412077 - 4412055 - f 79 -12 -3.17146 | opp_overlap 4412053 4412051 4412055 4412058, overlap 4412053 4412058 TTTCCTTACAACATA CAAGGCACTC ATT GGGTGCCTTG TCTCTTTCTTACAAT TERM 5797 4412055 - 4412077 + F 90 -14.2 -3.4214 | opp_overlap 4412055 4412053 4412058, overlap 4412053 4412051 4412058 TTTCCTTACAACATA CAAGGCACTC ATT GGGTGCCTTG TCTCTTTCTTACAAT TERM 5798 4412058 - 4412074 + F 79 -10.1 -3.83559 | opp_overlap 4412058 4412055 4412053, overlap 4412055 4412053 4412051 CCTTACAACATACAA GGCACTC ATT GGGTGCC TTGTCTCTTTCTTAC TERM 5799 4412985 - 4413014 + G 75 -12.8 -2.64759 | opp_overlap 4412974 4412975 4412972, overlap 4412984 4412982 AACAGCGCCGCCAAT GCTGCCGCGCGT CGCGTA GCGCTCGGCAGC CTATTGTTCAAATTG TERM 5800 4413158 - 4413184 + G 76 -5 -4.83169 | overlap 4413151 4413159 GCGCTGCCTGGCGAT GGTGCCATTTGC CGA GCTGATGGCGCG TTTTTGTAAACGAAT yjbB 4412289 - 4413920 + | putative transport protein TERM 5801 4413978 - 4413927 - T 95 -13 -3.79043 | gap 1, opp_overlap 4413927 GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTACGGAGA ACA TGCGCGTAGGCCC-GTCATTCGGCA TTCAATATGGCCTGG TERM 5802 4413927 - 4413978 + T 100 -16.8 -3.12999 | gap 1, opp_overlap 4413927 GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTACG GAGAACATGCG CGTAGGCC-CGTCATTCGGCA TTCAATATGGCCTGG pepE 4414685 - 4413996 - | peptidase E TERM 5803 4414047 - 4414086 + g 71 -10.6 -3.16881 | opp_overlap 4414047 4414050 TTCGCCCGCTTTAAA CACCCAGGTGGTATTCGG GCCG CCGAGAACCGCCTGGCCG TTGCTCACCTGAATC STM4191 4414757 - 4414858 + | putative cytoplasmic protein TERM 5804 4414966 - 4414954 - g 89 -3.3 -5.55664 | TGACCAGCAAAAAAA TGGCC AAA GTCCA GCGCACGGCTAAAAA TERM 5805 4415002 - 4414983 - g 77 -3.5 -5.03314 | CGCACGGCTAAAAAA TCACGCG TTCAGG CTCGTGA GGCCAGAGAGGCGGT STM4192 4414893 - 4415432 + | putative cytoplasmic protein yjbC 4415479 - 4416348 + | 23S rRNA pseudouridine synthase F yjbD 4416617 - 4416345 - | hypothetical protein STM4195 4417656 - 4416715 - | putative Na+-dependent transporter TERM 5806 4416833 - 4416814 - G 70 -10 -3.39327 | gap 1 GTGCCACACTGAGAA CAGCGC-GC CAG GCAGCGCTG CGAGCGGGCCAAAGT STM4196 4418646 - 4417918 - | putative cytoplasmic protein TERM 5807 4418240 - 4418251 + g 74 -4.4 -4.77157 | CTTATGGCATTGATT TCCT TTTC AGGA TTTTTCATAAATTCA TERM 5808 4418349 - 4418360 + g 74 -3 -4.8487 | opp_overlap 4418349 CATGCTGAGAAAAGT CATT AAGT AATG TTATTTTTTTCATAG TERM 5809 4418750 - 4418772 + r 84 -7.9 -4.83246 | opp_overlap 4418755 GTTATCGAAGTTTTA TTACATTCA AGATG TGAATGTAA TTTATTTGTTTATAA STM4197 4419133 - 4418843 - | putative inner membrane protein TERM 5810 4419376 - 4419354 - R 74 -10.5 -3.15354 | overlap 4419352 TATTTTAATTCAACA CCGCCGGGC TTTAT ACCCGGCGA GAGATTCAACAATCG STM4198 4419837 - 4419382 - | putative cytoplasmic protein STM4199 4420439 - 4419834 - | putative cytoplasmic protein STM4200 4422189 - 4420444 - | putative phage tail fiber protein H STM4201 4422824 - 4422192 - | putative phage tail protein STM4202 4423932 - 4422817 - | putative phage baseplate protein TERM 5811 4423819 - 4423839 + g 82 -5.3 -5.03314 | opp_overlap 4423812 GTCAATGAGCAGCCG CTCAGCCTG CGC CGGGTAGAG TTTTTTACCGCTGGC STM4203 4424282 - 4423923 - | putative phage baseplate protein TERM 5812 4424365 - 4424395 + r 77 -11.1 -3.13073 | gap 1, overlap 4424363 4424366 GGTCAGAATGTGTTT TGCCCGGTG-GCGC TTCT GCGCTTACCGGGCC TGTGTTGATGCACAT STM4204 4425993 - 4424446 - | putative inner membrane protein TERM 5813 4425049 - 4425031 - G 80 -4.6 -5.10154 | overlap 4425033 4425037 4425041 AGCTAAAAGGAAAAA CATAAACG TAC CGTTCATA ACCCGATCGGGGTAG TERM 5814 4425947 - 4425933 - G 86 -3.5 -5.30348 | ATTCAATAAGAAAAA TGGCC AAAAA AGCCA GTAGTATCATCGCCG STM4205 4426922 - 4425993 - | putative phage glycosyltransferase STM4206 4427281 - 4426919 - | putative phage glucose translocase TERM 5815 4426984 - 4426961 - G 95 -8.2 -5.0916 | TCTGGAATATAAAAA TCCGCAAATA AGGC TAATTGCGGA AAATACAATGAGCGT TERM 5816 4427154 - 4427142 - G 74 -3.3 -4.86862 | GCGAAAAAACTAAAA CTGAC AGC GACAG CAAAGCCCGCTACGT STM4207 4428331 - 4427609 - | putative phage baseplate component STM4208 4429384 - 4428341 - | putative cytoplasmic protein STM4209 4429581 - 4429372 - | putative inner membrane protein STM4210 4430534 - 4429581 - | putative methyl-accepting chemotaxis protein STM4211 4432888 - 4430534 - | putative phage tail protein TERM 5817 4430758 - 4430772 + g 75 -7 -4.4261 | overlap 4430737 GCGCGGCTGGCGTCG GCGGCG TGG CGGCGC TTTTCGTCTTCACAG TERM 5818 4430919 - 4430962 + g 95 -9.5 -4.74285 | gap 1, overlap 4430918 4430917 ACAGACGGCATTTCA GCGCTGATGCCCAGC-GCGC TTTTC GCCCAGTCGGGGATCAGCGC TTTTATCTTCTCAAT TERM 5819 4431165 - 4431177 + g 74 -6.9 -4.26903 | ACGCCGGCAATGCCT CCGTC AAA GGCGG TTTTGATGCGCTCCC TERM 5820 4432145 - 4432163 + g 74 -4.4 -4.73388 | opp_overlap 4432135, overlap 4432146 GAAATTCGCTGCCGC CGCGCCTG CGT CAGGGGCA TTTTTCATGGCGATT TERM 5821 4432368 - 4432411 + g 71 -9.5 -3.59262 | gap 2, overlap 4432345 4432370 CGAGTGGCCAGAGCC GCCTGCGCCCAGCTTTGCGCG CTGT CGCGGGAGGC-GGTCGC-GGC TTTGGCGATATCGGG TERM 5822 4432441 - 4432498 + g 95 -8.5 -4.90136 | gap 1, overlap 4432445 4432495 GCATGTAGCGGCTAA GATCCTGCAATGCGCTGACGCCGC CTTCGATCATC GTGGCGGCGGTGCTTTGCAG-ATC TTTTTGATCTTGATT TERM 5823 4432997 - 4432975 - R 93 -12.7 -3.72576 | opp_overlap 4432972 4432975 4432992 4432994 GCTTGGGTCAGGAAA CCCGCAGGC ATTAA GCCTGCGAG TCGTATTCGTGTTTA TERM 5824 4432975 - 4432997 + r 72 -10.5 -2.8185 | opp_overlap 4432975, overlap 4432972 4432992 4432994 GCTTGGGTCAGGAAA CCCGCAGGC ATTAA GCCTGCGAG TCGTATTCGTGTTTA TERM 5825 4433435 - 4433416 - R 93 -13.6 -3.53091 | opp_overlap 4433415 ATTCGTCGTGTTAAA TTCGGGGC CGTA GCCCCGAA GTAATTAACCGCCAA STM4212 4433964 - 4433440 - | putative phage tail core protein STM4213 4435391 - 4433964 - | putative phage tail sheath protein STM4214 4435578 - 4435381 - | putative cytoplasmic protein STM4215 4436030 - 4435575 - | putative cytoplasmic protein TERM 5826 4436192 - 4436154 - R 100 -12.7 -4.75954 | gap 1, opp_overlap 4436161, overlap 4436161 AAAAGTTAAAACAAA TAAA-AAATCCCCGGCGT ATAA ACGACGGGGATTTGTTTA ATGGTTACCTCGTTG TERM 5827 4436184 - 4436161 - R 100 -12.4 -5.88476 | opp_overlap 4436161, overlap 4436154 AAAACAAATAAAAAA TCCCCGGCGT ATAA ACGACGGGGA TTTGTTTAATGGTTA TERM 5828 4436161 - 4436184 + r 100 -12.4 -4.53349 | opp_overlap 4436161 4436154 AAAACAAATAAAAAA TCCCCGGCGT ATAA ACGACGGGGA TTTGTTTAATGGTTA STM4216 4436504 - 4436190 - | putative inner membrane protein STM4217 4437122 - 4436517 - | putative soluble lytic murein transglycosylase TERM 5829 4436677 - 4436688 + g 74 -2.2 -5.09685 | gap 1, opp_overlap 4436670 GCATCCAACCCCTTT GC-GG CGG CCAGC TTTTTATCTCTGTTC TERM 5830 4437002 - 4436984 - G 70 -9.5 -3.37533 | opp_overlap 4436983 4436984, overlap 4436985 CGGCAAAATCAGCAA CGGGGGC GTTAA GCCCCCA GATTTCGCGCGCGGT STM4218 4437412 - 4437125 - | putative inner membrane protein TERM 5831 4437195 - 4437154 - G 70 -8.7 -3.76125 | gap 1, opp_overlap 4437188, overlap 4437155 4437166 4437184 CGACGGCAAGGCAAA TTGCCGCAACGATGA-TCGC GCG ACGAATCATCGCCGCGGCGC AGCACAGCGATTCTT TERM 5832 4437194 - 4437155 - G 72 -12.2 -2.85354 | gap 1, opp_overlap 4437188, overlap 4437154 4437166 4437184 GACGGCAAGGCAAAT TGCCGCAACGATGA-TCGC GCG ACGAATCATCGCCGCGGCG CAGCACAGCGATTCT STM4219.S 4437988 - 4438335 + | putative cytoplasmic protein lysC 4439817 - 4438468 - | aspartate kinase III pgi 4440162 - 4441811 + | glucose-6-phosphate isomerase TERM 5833 4441820 - 4441868 + F 72 -9 -3.53811 | overlap 4441819 CGCCTGATGGCACTG CG-CTTATCCGGTCTACGTAATGC ATA GCGTC-TGTAGGCCGGGTAAGGCG TTTCGCCGCCATCCG TERM 5834 4441929 - 4441910 - f 83 -4.2 -5.31072 | opp_overlap 4441911, overlap 4441911 ATAAGATAATAAAAA GGCCGATA TTCA CATCGGCT TTTTTTATAAGATAA TERM 5835 4441911 - 4441928 + F 91 -7 -5.626 | opp_overlap 4441910 4441911 TAAGATAATAAAAAG GCCGAT ATTCAC ATCGGC TTTTTTTATAAGATA yjbE 4442255 - 4442497 + | putative outer membrane protein TERM 5836 4442537 - 4442516 - f 76 -11.7 -2.72344 | opp_overlap 4442516 4442519, overlap 4442519 CGGTACGTTTAACCA TAACCACAC TCCG GTGTGGTTA TTTTGCCCCTCTGGA TERM 5837 4442516 - 4442537 + F 95 -11.7 -4.13014 | opp_overlap 4442516 4442519, overlap 4442519 CGGTACGTTTAACCA TAACCACAC TCCG GTGTGGTTA TTTTGCCCCTCTGGA TERM 5838 4442519 - 4442534 + F 79 -9 -4.18908 | opp_overlap 4442516 4442519, overlap 4442516 TACGTTTAACCATAA CCACAC TCCG GTGTGG TTATTTTGCCCCTCT TERM 5839 4442534 - 4442519 - f 72 -9 -3.51329 | opp_overlap 4442519 4442516, overlap 4442516 TACGTTTAACCATAA CCACAC TCCG GTGTGG TTATTTTGCCCCTCT yjbF 4442531 - 4443199 + | putative outer membrane lipoprotein yjbG 4443196 - 4443933 + | putative periplasmic protein yjbH 4443933 - 4446029 + | putative outer membrane lipoprotein TERM 5840 4446252 - 4446268 + G 72 -2.1 -4.87665 | GGGGCTGCTTACCCT CGGTCTG ATC CTGGTCG TTTTTCTCGGTAAAG yjbA 4446172 - 4446582 + | phosphate-starvation-inducible protein PsiE TERM 5841 4446667 - 4446652 - T 100 -10.4 -5.66684 | TAACGCATAAAAAAA GCGCTC CGAA GAGCGC CAAAATACGACCATA malG 4447638 - 4446748 - | maltose transporter permease malF 4449197 - 4447653 - | maltose transporter membrane protein TERM 5842 4448223 - 4448211 - G 71 -4.7 -4.55849 | CAAAATTGAAATAAA CGACG GTA CGGCG TAGGGCAGAATCAGC TERM 5843 4449154 - 4449176 + g 75 -4 -4.91852 | opp_overlap 4449155, overlap 4449144 4449156 ATTACTGACCATTTA AGCTGGTCGC TTT GCCACCAGTG TTTCTTTTTAATGAC TERM 5844 4449156 - 4449174 + g 76 -8.8 -4.06997 | opp_overlap 4449155, overlap 4449144 4449154 TACTGACCATTTAAG CTGGTCGC TTT GCCACCAG TGTTTCTTTTTAATG TERM 5845 4449254 - 4449296 + r 95 -12.9 -3.86346 | gap 1, opp_overlap 4449293 TGTGCCTGATGGCGC TGCGCTTATCAGGCCTACGG TGTG TTGTAGGCCGGATAAG-GCA TTTATGCCGCCATCC malE 4450519 - 4449329 - | maltose ABC transporter periplasmic protein TERM 5846 4451316 - 4451342 + G 74 -4.4 -4.7497 | gap 1, overlap 4451325 CGCGTAGCGATTGGC CGCACGCTGGT GGCGGA GCC-GCGTGTG TTTTTGCTGGATGAA malK 4450881 - 4451990 + | maltose/maltodextrin transporter ATP-binding protein TERM 5847 4452259 - 4452247 - g 71 -7.7 -4.05788 | GGTGCCCAAAGTAAA TACCG TCT CGGTA ACGAATGTGAAACCT lamB 4452079 - 4453437 + | maltoporin TERM 5848 4453478 - 4453459 - f 93 -15 -3.06796 | opp_overlap 4453449 GGTCATCTGACGTAA CGAGGGGC GCAA GCCCCTCG GAAACATCAGGTCTG TERM 5849 4454345 - 4454307 - g 76 -12.2 -3.09803 | TAACGGTAGGCAATA CCGCCGCGCCGGTCGCTG CGC CAGCGCCAGTCGCGCCGA AGAAAAGCGAGCCGA malM 4453601 - 4454518 + | maltose regulon periplasmic protein TERM 5850 4454552 - 4454571 + F 100 -11.4 -5.75599 | opp_overlap 4454550 GATTTTGCAGCAACT GGTGCGTC TCCT GGCGCACC TTTTTTTATCATTTC TERM 5851 4455157 - 4455167 + G 89 -3.2 -5.47821 | CGGAAAACCGCTGTT GCTT ACC GAGC TTTTTTTACCTGCAT ubiC 4454699 - 4455196 + | chorismate pyruvate lyase ubiA 4455210 - 4456082 + | 4-hydroxybenzoate octaprenyltransferase plsB 4458601 - 4456181 - | glycerol-3-phosphate acyltransferase TERM 5852 4457592 - 4457575 - G 74 -6.9 -4.22652 | CCAGACGACGGAAAA TCGGGCC AGCG GGCCAGA AATTAAGGTTAATAC TERM 5853 4459017 - 4459003 - g 72 -11.4 -3.06679 | opp_overlap 4458999 4458998 AACAGCGCTATTGAA GCGGTC GTG GACCGC ATCGGTTCTGAATAC dgkA 4458772 - 4459140 + | diacylglycerol kinase TERM 5854 4459379 - 4459340 - g 95 -14.4 -3.53444 | gap 1, opp_overlap 4459328 CGACGCGTGCGGAAA TCGCGCAGCGTTTGGGG TTCCGTT CCCCAAACGCGGCG-GA AGAACACCTTAAAGC lexA 4459249 - 4459857 + | LexA repressor TERM 5855 4460171 - 4460202 + G 86 -7.2 -4.73614 | gap 1 GCCCTGTTTTCCTGG GCGGCGTGGCGGTGG GCG CGACTGCCAC-CAGC TTTCTTTTCATGCTG TERM 5856 4460714 - 4460734 + G 70 -6.7 -4.11692 | TGCTAAAACAGGCCT GGCGCGGCA ACG TGCGCCGCC TTTTGGCGCTCAATC dinF 4460035 - 4461360 + | DNA-damage-inducible SOS response protein STM4239 4461357 - 4461470 + | putative cytoplasmic protein yjbJ 4461489 - 4461701 + | putative stress-response protein zur 4462315 - 4461800 - | zinc uptake transcriptional repressor TERM 5857 4462252 - 4462270 + g 78 -6.6 -4.66833 | overlap 4462254 GAGGCGTCAGGCGCA CGTTGCGC TGC GCGCAGAG TTTTTCAGCTTGCGC TERM 5858 4463002 - 4462974 - g 74 -4.4 -4.74504 | gap 1, overlap 4462975 4462976 ATCTCAACGGAAAAA CCGCCCG-CGCCA ATGC CGGCGCCGGGTTG GCGGTAAGTATTCCA STM4242 4462562 - 4463872 + | conjugative transfer protein TERM 5859 4463883 - 4463903 + F 100 -18.3 -3.70068 | TCTGAGGTGCTTTCA CCGGAGGCG CTA CGCCTCCGG TTTAGCGTTATGCTA yjbN 4463960 - 4464958 + | tRNA-dihydrouridine synthase A TERM 5860 4464989 - 4465012 + F 100 -8.1 -5.27206 | TAGTCAATCTCACCA CGCCCTGTG CAGTCT TGCAGGGCG TTTTTCTTATATATC pspG 4465126 - 4465368 + | phage shock protein G TERM 5861 4465530 - 4465500 - T 89 -5.6 -5.80364 | gap 2, opp_overlap 4465500 4465502 4465503 4465504, overlap 4465504 AGCCGAACAAAAAAA GAAA--GGGCTTCC CGGGT GGAAGCCCAATTTC TTTGCAGAGCTATTA TERM 5862 4465502 - 4465526 + T 72 -5.6 -4.41616 | opp_overlap 4465500 4465504, overlap 4465500 4465503 4465504 CCGAACAAAAAAAGA AAGGGCTTCC CGGGT GGAAGCCCAA TTTCTTTGCAGAGCT TERM 5863 4465504 - 4465524 + T 78 -12.6 -2.54371 | opp_overlap 4465500 4465504, overlap 4465503 4465502 4465500 GAACAAAAAAAGAAA GGGCTTCC CGGGT GGAAGCCC AATTTCTTTGCAGAG TERM 5864 4465524 - 4465504 - T 100 -12.6 -5.33131 | opp_overlap 4465504 4465503 4465502 4465500, overlap 4465500 GAACAAAAAAAGAAA GGGCTTCC CGGGT GGAAGCCC AATTTCTTTGCAGAG qor 4466526 - 4465543 - | quinone oxidoreductase, NADPH-dependent TERM 5865 4465614 - 4465630 + g 74 -7.3 -4.08216 | CGCGACGGGCATCTT TTAACGC ATA GCGTTGA TTTTCAGCCACATCG TERM 5866 4465983 - 4465995 + g 75 -6.2 -4.58395 | opp_overlap 4465962, overlap 4465970 AGGCACCGGCGTCCA GCGC CCGCT GCGC TTTTTGCGCGCTACC TERM 5867 4466030 - 4466040 + g 77 -8.2 -4.14392 | GTACCGATAAGCTTC GCGC CCA GCGC TTTTGCCCATTGGCA TERM 5868 4466677 - 4466666 - g 71 -5.8 -4.36914 | opp_overlap 4466666 GTTGCCGGGATAAAA GTGC CGCC GCAC TCGATTGAAGCGGAA TERM 5869 4466938 - 4466926 - g 78 -6.9 -4.57569 | overlap 4466928 GGAGCTGTCTAAAAA CACGC CAA GCGCG GCGAATATCAGTGCT dnaB 4466591 - 4468006 + | replicative DNA helicase alr 4468038 - 4469117 + | alanine racemase tyrB 4469303 - 4470496 + | aromatic amino acid aminotransferase TERM 5870 4470493 - 4470543 + F 71 -9.6 -3.29541 | opp_overlap 4470499 4470519, overlap 4470490 ATTTGCCGCTGTCAT GTAATATTCAGGCCGGACGGCGAT AAC AGTGCCCTCCGGCCTGACAATAGC TGTTGTGATCATCCT TERM 5871 4470537 - 4470499 - f 78 -11.7 -3.08679 | opp_overlap 4470493 4470490, overlap 4470519 CGCTGTCATGTAATA TTCAGGCCGGACGGC GATAACAGT GCCCTCCGGCCTGAC AATAGCTGTTGTGAT TERM 5872 4470592 - 4470624 + F 72 -2.8 -5.00616 | gap 1, overlap 4470594 CGCAGATAATCCTTC CT-TTTGACCGTTAC TGGC GTTATGGTCAGATAG TTTTTTGAGCAAAGA TERM 5873 4470861 - 4470883 + G 83 -10.4 -3.92324 | opp_overlap 4470852 4470850 AAAACAGCCTCACCG GACGCCCGCC GAT GGCGGTCGGC TTTGATATTGACGAC aphA 4470683 - 4471396 + | acid phosphatase/phosphotransferase TERM 5874 4471424 - 4471400 - f 73 -4.2 -4.77036 | opp_overlap 4471403, overlap 4471401 4471403 TCGGAGTACTAAAAA TCAGGAGAGC GACAG GCTCTCCTTT TTTGCATGATTTTTG TERM 5875 4471421 - 4471403 - f 74 -10.3 -3.29543 | opp_overlap 4471403, overlap 4471401 4471400 GAGTACTAAAAATCA GGAGAGC GACAG GCTCTCC TTTTTTGCATGATTT TERM 5876 4471403 - 4471421 + F 100 -10.3 -5.13521 | opp_overlap 4471403 4471401 4471400 GAGTACTAAAAATCA GGAGAGC GACAG GCTCTCC TTTTTTGCATGATTT yjbQ 4471525 - 4471941 + | putative cytoplasmic protein yjbR 4471944 - 4472300 + | putative cytoplasmic protein STM4252 4472639 - 4472301 - | putative inner membrane protein TERM 5877 4472574 - 4472559 - G 80 -10.4 -3.86524 | opp_overlap 4472564 4472567 ATACGTCTGGATAAA CTCGGC AATC GCCGAG GACGCTACAGGGTGT STM4253 4473081 - 4472626 - | putative outer membrane lipoprotein TERM 5878 4473209 - 4473174 - RH 100 -9.7 -4.77036 | opp_overlap 4473172, overlap 4473177 4473178 TGGGATGAGGAAAAA TGATGCCGCTTCCCG GCGAAT CGGAAAGCGGCGTGA AGGTTATTTGAGCAT TERM 5879 4473206 - 4473177 - RH 77 -11.4 -3.29543 | opp_overlap 4473172, overlap 4473174 4473178 GATGAGGAAAAATGA TGCCGCTTCCCG GCGAAT CGGAAAGCGGCG TGAAGGTTATTTGAG TERM 5880 4473205 - 4473178 - RH 86 -14.9 -2.57003 | opp_overlap 4473172, overlap 4473177 4473174 ATGAGGAAAAATGAT GCCGCTTCCCG GCGAAT CGGAAAGCGGC GTGAAGGTTATTTGA uvrA 4476038 - 4473213 - | excinuclease ABC subunit A TERM 5881 4473270 - 4473238 - GH 76 -12 -2.60901 | gap 1, opp_overlap 4473238 4473237, overlap 4473237 ATAGGTTTAAGGAAG CG-GGCGGTATGCGA CGCC TCGCACTCCGCCACG GTTTCCGGCGTACCG TERM 5882 4475112 - 4475098 - GH 74 -2.8 -4.84363 | overlap 4475100 TGAAAGTAGTAAAAA TTGCGA CGA TCCCAA CCACGAATCGCGCCG TERM 5883 4475868 - 4475850 - GH 72 -2.4 -4.88736 | gap 1 CATGAGCGACAAAAA CTGCCGC GCGTAA GCGG-AG AGCGATTCAACGTAA STM4255 4476003 - 4476119 + | putative cytoplasmic protein ssb 4476286 - 4476816 + | single-strand DNA-binding protein TERM 5884 4476896 - 4476877 - f 88 -12.2 -3.53012 | opp_overlap 4476877 4476890, overlap 4476890 TCTCGTCTGCTGAAA TGCCTGGT GTAA ACCAGGCA TTTTCTTACCTGGTA TERM 5885 4476877 - 4476896 + F 100 -12.2 -4.69053 | opp_overlap 4476877 4476890, overlap 4476890 TCTCGTCTGCTGAAA TGCCTGGT GTAA ACCAGGCA TTTTCTTACCTGGTA TERM 5886 4477631 - 4477659 + F 74 -6.8 -4.30719 | opp_overlap 4477634, overlap 4477634 CCTAATTAAAAAAAT GAAGAGTGTTTT TAATT AAAGCACTCATC TTTGTTGTGGGCGCA TERM 5887 4477675 - 4477697 + F 72 -2.8 -4.98255 | TTTGTTGTGGGCGCA TAAAAATGGC GTC GTTGTTTTTA TTTTTCTGATTACGA TERM 5888 4478292 - 4478275 - g 70 -2.8 -4.73682 | GGTTAGAAGACAAAA TCAATA GTAATT TATTGA TAGAAATGGTTATTC STM4257 4477857 - 4478489 + | hypothetical protein STM4258 4478486 - 4479874 + | putative methyl-accepting chemotaxis protein STM4259 4479864 - 4481183 + | putative ABC exporter outer membrane component STM4260 4481180 - 4482457 + | cation efflux pump TERM 5889 4483128 - 4483115 - g 79 -3.1 -5.14163 | ACCTATTAATAAAAA TACCA GTAC TGGCA AAAGTAATAGCAGTA TERM 5890 4483618 - 4483608 - g 75 -6.8 -4.39998 | opp_overlap 4483607 TATGTAGATAATAAA CTGG TTG CCAG CGTTGATGTCGATAA TERM 5891 4484030 - 4484041 + G 73 -5.8 -4.44797 | GCATACCTCAGCGAC GGCA AATC TGCC TTTTACTATTGATAC TERM 5892 4485261 - 4485246 - g 74 -4.7 -4.81851 | ACGCAAACGCAAAAA CCAAC AATAGA GTTGG TCAACGATACGGGGG TERM 5893 4489122 - 4489104 - g 74 -3 -4.8622 | overlap 4489106 4489107 GCGGGGAACGAAAAA CACTCAGC GTC GCTGACGG TCACTGTTGATACCC TERM 5894 4492005 - 4491991 - g 70 -7.1 -4.11394 | ACGGCACGTTTAAAA CGGTG GTACT CACCG AATCAGCCGACGGCT TERM 5895 4494190 - 4494204 + G 71 -7.2 -3.96624 | opp_overlap 4494179 AAGAGGTATCATTCA CAATAG ACA CTATTG TTTCTGATCCCAGTA TERM 5896 4497320 - 4497297 - g 77 -4.4 -4.8622 | opp_overlap 4497311, overlap 4497299 TGGGTTAATGAAAAA GGCCACTGGC AGAT GCCGGTGAAC CCGCTTTATTTCACA TERM 5897 4498125 - 4498115 - g 81 -2.4 -5.43866 | opp_overlap 4498115 TAATGCTGAAAAAAA TGCC GAT GGCG TTTGGTTCTTTACGC STM4261 4482474 - 4499153 + | putative inner membrane protein TERM 5898 4499162 - 4499185 + F 95 -12.4 -4.00868 | opp_overlap 4499161 4499158 4499154, overlap 4499163 CGCATAATAACGGAG GCCCCTCACC TTTG GGTGAGGGGG TTTACTTATGGATAA TERM 5899 4499163 - 4499184 + F 93 -15.9 -3.00039 | opp_overlap 4499161 4499158 4499154, overlap 4499162 GCATAATAACGGAGG CCCCTCACC TTTG GGTGAGGGG GTTTACTTATGGATA TERM 5900 4501047 - 4501058 + G 83 -5.8 -4.85599 | CGTAGTCTGAGTAGT GACG CCAG CGTC TTTTTATGGGATGAA STM4262 4499193 - 4501259 + | putative ABC-type bacteriocin/lantibiotic exporter TERM 5901 4501299 - 4501339 + T 93 -13.6 -3.55444 | opp_overlap 4501309, overlap 4501309 TCAGGTGGTACTGCT TAATAAAAAAGACCCGTT GCACA AACGGGTCTTTTTTGTCA TTTAACGAGTCGGCA TERM 5902 4501329 - 4501309 - T 100 -11.2 -5.4505 | opp_overlap 4501299 4501309 CTGCTTAATAAAAAA GACCCGTT GCACA AACGGGTC TTTTTTGTCATTTAA TERM 5903 4501309 - 4501329 + T 100 -11.2 -5.42265 | opp_overlap 4501309, overlap 4501299 CTGCTTAATAAAAAA GACCCGTT GCACA AACGGGTC TTTTTTGTCATTTAA yjcB 4501818 - 4501537 - | putative inner membrane protein TERM 5904 4502917 - 4502929 + G 77 -4.8 -4.88067 | GGGAATGTATGATAC GGTG ACCAA CACC TTTTTCTCCCTGAGT TERM 5905 4503301 - 4503340 + G 70 -6.6 -4.1822 | gap 2 CGAAGCGCTATTGCG TTGGC-CGGGCT-ATCAC GGTCCG GTGATGAGCCCGTGCGAA TTTATTCCGCTGGCG TERM 5906 4503963 - 4503936 - g 91 -11.2 -4.30719 | overlap 4503937 CCTGGCTACAACAAA CGCCCGCGCCTC TGAC GATACGCGGGCA GACGCCCTACAGGCG TERM 5907 4503962 - 4503937 - g 83 -12.5 -3.1811 | overlap 4503936 CTGGCTACAACAAAC GCCCGCGCCTC TGAC GATACGCGGGC AGACGCCCTACAGGC yjcC 4502381 - 4503982 + | putative diguanylate cyclase/phosphodiesterase soxS 4504293 - 4503970 - | DNA-binding transcriptional regulator SoxS soxR 4504380 - 4504838 + | redox-sensing transcriptional activator TERM 5908 4504899 - 4504874 - f 95 -13.4 -4.1899 | opp_overlap 4504874, overlap 4504879 TGAGCTCACCTAAAA CTAAAGCGCC GCTAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5909 4504874 - 4504899 + F 100 -13.4 -4.4572 | opp_overlap 4504874 4504879 TGAGCTCACCTAAAA CTAAAGCGCC GCTAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5910 4504894 - 4504879 - f 76 -7.5 -4.21922 | opp_overlap 4504874, overlap 4504874 TCACCTAAAACTAAA GCGCC GCTAAG GGCGC TTTAGTTTGTTTCCG TERM 5911 4505395 - 4505380 - g 74 -10.4 -3.55563 | ATCGGACGCTTTAAA CCTGCG GATG CGCAGG GGAAACAACACTATC STM4267 4505131 - 4505799 + | putative glutathione S-transferase TERM 5912 4506665 - 4506646 - g 74 -4.8 -4.72272 | CCTGGTCATTAAAAA CCCGCTGG ATGG CCTGCCGG TCGCGCTGGGCGATT TERM 5913 4507451 - 4507467 + G 74 -4.3 -4.82901 | GGGACTGTCGTCATT GCGGTCG CGC TGGTCGC TTTTTATGCCGGCGG yjcD 4506146 - 4507495 + | hypothetical protein TERM 5914 4507510 - 4507542 + F 100 -17.2 -4.07885 | gap 1, opp_overlap 4507517, overlap 4507517 GCTCTGCCTTCATTC TGAAAAACGGGCGGC GTTG GCCGCCCGTTTT-CA TTTTCAGGACACATC TERM 5915 4507536 - 4507517 - f 100 -16.4 -4.59773 | opp_overlap 4507510 4507517 CTTCATTCTGAAAAA CGGGCGGC GTTG GCCGCCCG TTTTCATTTTCAGGA TERM 5916 4507517 - 4507536 + F 100 -16.4 -4.67038 | opp_overlap 4507517, overlap 4507510 CTTCATTCTGAAAAA CGGGCGGC GTTG GCCGCCCG TTTTCATTTTCAGGA TERM 5917 4507752 - 4507779 + G 77 -8.4 -4.09556 | gap 1, overlap 4507746 4507774 CCTTATGCAGATCGC CGTTGGC-GCGCT GTT GGCGTGGCCGACG TTTGGTTTGCATGTG TERM 5918 4508137 - 4508195 + G 70 -9.4 -3.62746 | opp_overlap 4508137 4508138 CTGGTATCGCTGAAA TTCGCCGTCGCGGTGGCGATGGGGACGA TGG TCTTTACCGTCGGCGGCGCGACGCTGGA ATTTTTTAAGGTCGC yjcE 4507645 - 4509291 + | Na/H transport protein STM4270 4510273 - 4509386 - | putative transcriptional regulator TERM 5919 4509570 - 4509544 - G 71 -8.6 -3.88787 | overlap 4509559 4509560 CCAGACGCTGACAAA TCGGCTCCGGCA AAA TGGCGATGCCGA CGCCCGCTTGCACCA STM4271 4510377 - 4510787 + | putative inner membrane protein TERM 5920 4511261 - 4511280 + G 76 -5 -4.73448 | gap 1, overlap 4511263 4511272 4511276 CTGGCGTGTTTGGCA TGGCG-GTC GGC GACGCGCTA TTTTTGCGTCTCTCT STM4272 4510780 - 4511469 + | putative inner membrane protein actP 4513157 - 4511508 - | acetate permease yjcH 4513468 - 4513154 - | putative inner membrane protein TERM 5921 4513390 - 4513405 + g 73 -5.4 -4.64598 | overlap 4513391 TAACCGACAGAATCG TGGCAA ACCG TTGCCG TTTTTCAACTAATTC acs 4515672 - 4513714 - | acetyl-CoA synthetase TERM 5922 4515390 - 4515406 + g 84 -8.7 -4.26076 | opp_overlap 4515390 CGCCTTCCCAGATAA TGGCGGT GCG ATCGCCA TTTTCCTGCAAATGG STM4276 4515859 - 4516005 + | putative cytoplasmic protein TERM 5923 4516085 - 4516064 - f 91 -7.3 -5.4588 | overlap 4516054 4516065 GAAAACGATAAAAAA TCGCCATTA AAGA TAATGGCGC AATCTGGATGAGACC TERM 5924 4516084 - 4516065 - f 84 -10.8 -3.85088 | overlap 4516054 4516064 AAAACGATAAAAAAT CGCCATTA AAGA TAATGGCG CAATCTGGATGAGAC TERM 5925 4517495 - 4517485 - g 70 -6.8 -4.08945 | AGGACTTCCTGAAAA CGGT CGT ACCG CAGTGGGAAGATCAG nrfA 4516104 - 4517540 + | cytochrome c nitrite reductase nrfB 4517652 - 4518218 + | cytochrome c-type protein NrfB TERM 5926 4518714 - 4518698 - g 76 -10.8 -3.71108 | opp_overlap 4518697 4518693, overlap 4518687 AAAACCAACCTGAAA GCGGGC AAACA GCCCGC CTGCGTTGAGTCATG nrfC 4518215 - 4518886 + | putative formate-dependent nitrite reductase TERM 5927 4519786 - 4519800 + G 76 -3.4 -5.05712 | GCCAGTTTGACCGGC GTGCTG CTG CTGCGC TTTTTCATTCTTTAT nrfD 4518883 - 4519839 + | putative formate-dependent nitrate reductase nrfE 4519832 - 4522054 + | formate-dependent nitrite reductase TERM 5928 4522289 - 4522271 - g 85 -2.4 -5.4505 | gap 1, overlap 4522272 GGCTGCAAGAAAAAA TCC-GCG CCAATC CGCAGGA TAGCGAGCAATGGGC nrfG 4522051 - 4522671 + | formate-dependent nitrite reductase complex subunit NrfG TERM 5929 4523635 - 4523646 + G 83 -7.2 -4.63527 | overlap 4523634 TGGTAATGCGCTATG CGCC AGTG GGCG TTTTTGCGCTGATCG TERM 5930 4524290 - 4524273 - g 86 -6.9 -5.0538 | TTTGACCGCAAAAAA GCGCTGG CCTA CGAGCGC GACGTGCTGGGCAAA gltP 4523016 - 4524326 + | glutamate/aspartate:proton symporter yjcO 4525173 - 4524484 - | TPR repeat-containing protein TERM 5931 4524976 - 4524993 + g 75 -6.2 -4.57073 | overlap 4524975 CGCGCAGGCGTCGGC GTCGCC ACTGTC GGCGGC TTTTTGCGCCCAGTA TERM 5932 4525233 - 4525252 + r 86 -13.6 -3.29144 | opp_overlap 4525233 GTATGGATAAAAAAA CAGCCTCC GGGC GGAGGCTG TTATAGGGAAAATGC TERM 5933 4525252 - 4525233 - R 100 -13.6 -5.64274 | opp_overlap 4525233 GTATGGATAAAAAAA CAGCCTCC GGGC GGAGGCTG TTATAGGGAAAATGC fdhF 4527497 - 4525350 - | formate dehydrogenase TERM 5934 4525636 - 4525669 + g 77 -11.1 -3.57144 | gap 1 ACCAGCGCTTCATCT TCAATGCC-CAGACGC GCG GCGTCGGCGGTATTGA TTTGCGCATAGCCCG TERM 5935 4526183 - 4526194 + g 77 -7.2 -4.30576 | opp_overlap 4526175 GTAAAATCACATCCG CCGC CGAC GCGG TTTTGGTCATGAAGA TERM 5936 4526757 - 4526784 + g 74 -4.2 -4.69053 | gap 1, overlap 4526758 AAAACCTTCGGTACG GCTG-GCGACAAA CGC TTTGTCGTACAGG TTTTCTTCAATAATG TERM 5937 4526820 - 4526838 + g 71 -4.4 -4.57073 | overlap 4526822 CCCCATGGCGTTGAG CAGCGCGA TAT TCGAGCCG TTTTTCAACGCGATA TERM 5938 4527848 - 4527815 - R 95 -14.6 -3.55219 | gap 1, overlap 4527802 4527803 AACGCCAGGATAGAA CAGGCCGCGGCA-GG CAGTT CCATACCGCGGCCCG GCTTCAGAGGAGGCT lpxO 4528760 - 4527852 - | putative dioxygenase phnO 4529452 - 4529018 - | aminoalkylphosphonic acid N-acetyltransferase phnB 4530047 - 4529604 - | hypothetical protein phnA 4530502 - 4530167 - | hypothetical protein TERM 5939 4531206 - 4531218 + G 70 -6.9 -4.1421 | overlap 4531207 TCCCTTCCTGATTCG TCCGC TCG GCGGG TTATTCTTTGGTATG TERM 5940 4532321 - 4532311 - g 77 -8.2 -4.08064 | overlap 4532312 AATCGTCCGTTAAAA GGCG CAA CGCC AGCGGCGTCGGACAT proP 4530970 - 4532472 + | proline/glycine betaine transporter TERM 5941 4532584 - 4532600 + T 72 -5.1 -4.6645 | overlap 4532585 ACGACCCTGTGTAGT GTGCTGA TTG TCAGCAG TTTTATCTATGTGTG TERM 5942 4532661 - 4532676 + T 77 -9 -3.96483 | opp_overlap 4532656, overlap 4532656 TTTTTCAACAGCACC CAGGCA CGGG TGCCTG TTCTTTCCGTACGGT basS 4533709 - 4532639 - | sensor protein BasS/PmrB TERM 5943 4533357 - 4533409 + g 73 -5.5 -4.66833 | gap 1 TCAATCTCAAGCGTG GAGCTGTGAATGGCGATCGGCG CCAGATTATC CGCCGTCCGCGCTTC-CAGCTC TTTTTGCAGTTCGGC basR 4534387 - 4533719 - | DNA-binding transcriptional regulator BasR yjdB 4536027 - 4534384 - | putative cell division protein TERM 5944 4535309 - 4535279 - G 80 -9.1 -4.2074 | gap 1, opp_overlap 4535280, overlap 4535275 CCGCCAAGAGAGAAA TCATCGCCGCGCGA GGTT TCGC-CAACGATGA GAATCGTCAGGTTTT TERM 5945 4535780 - 4535756 - G 77 -4.1 -5.13343 | overlap 4535758 4535759 TAAGTCAAAATAAAA TACTGCGCGGC AGC GCCGACCAGAA TAAAAACGCAGGCCA TERM 5946 4535768 - 4535758 - G 70 -6.8 -4.17301 | overlap 4535756 4535759 AGTCAAAATAAAATA CTGC GCG GCAG CGCCGACCAGAATAA TERM 5947 4536108 - 4536133 + r 82 -13.3 -3.0634 | CTTAATGTTGGTGGC GGCCGGATAAC CTGC GCTATCCGGCC TGTTGCGATAACATT yjdE 4537498 - 4536161 - | arginine:agmatin antiporter TERM 5948 4536740 - 4536717 - G 70 -8.8 -3.64703 | gap 1, opp_overlap 4536737, overlap 4536672 GCCGCGTCACCGAAA GGCGATGC-CG ACA CGCGCAGCGCC GCGTTGGGGATCATC adiY 4538399 - 4537638 - | transcriptional activator TERM 5949 4538617 - 4538598 - R 100 -12.1 -5.60993 | TTTTGTATAAAAAAA GCGCGGG ATGGGG CCCGCGC AAAAAGGTATGACAG adi 4540967 - 4538697 - | catabolic arginine decarboxylase TERM 5950 4540052 - 4540069 + g 100 -7 -5.60993 | CGGCTTTAGTTTTGG TCAGCG GGCTGG CGCTGA TTTTTTTCTGCAAGG TERM 5951 4540664 - 4540676 + g 76 -5.5 -4.70659 | overlap 4540662 GCAGGTCGCGGTCCA GCGAT GCC GTCGC TTTTTCCCTGTCGCC TERM 5952 4541136 - 4541168 + r 86 -4.8 -5.48825 | overlap 4541139 TTATTGATATTGAGC GATTTCACCTGCCG TTTAT CGACAGGTGAATTA TTTTTTTGGCTGATA TERM 5953 4541139 - 4541165 + r 100 -10.9 -4.8236 | overlap 4541136 TTGATATTGAGCGAT TTCACCTGCCG TTTAT CGACAGGTGAA TTATTTTTTTGGCTG melR 4542129 - 4541197 - | DNA-binding transcriptional regulator MelR melA 4542398 - 4543753 + | alpha-galactosidase TERM 5954 4544619 - 4544635 + G 93 -8.7 -4.74706 | CTACTTCACCTATGT GATTGGC GAT GCCGATC TTTTTCCCTATTACC TERM 5955 4545055 - 4545069 + G 73 -5.7 -4.41137 | opp_overlap 4545054, overlap 4545048 CAGTCTGCGCAAACC CTGCA GGGGA TGCAG TTTATTATGATTGTC melB 4543837 - 4545267 + | melibiose:sodium symporter TERM 5956 4545320 - 4545295 - T 82 -11.9 -3.30124 | gap 1 GTGCAGGCCGGATAA GCCGGATAAGCG TAG CGC-CATCCGGC AATTAACCGATAACG fumB 4547011 - 4545365 - | fumarase B dcuB 4548447 - 4547107 - | anaerobic C4-dicarboxylate transporter TERM 5957 4547543 - 4547554 + g 80 -4.4 -5.0538 | GCAATCATACCGGAA CGAA AAAC TTCG TTTTTTGAGATAGAC STM4302 4548860 - 4548594 - | putative cytoplasmic protein TERM 5958 4548687 - 4548707 + g 78 -6.9 -4.64024 | overlap 4548688 CAGTAAATTATGATT TGTCTGTTT TAA AAACAGGCG TTTATTATTTGATTT TERM 5959 4549021 - 4549007 - R 100 -11.4 -4.98531 | opp_overlap 4549009 TTTTGAAATTAAAAA CAGCGC AGA GCGCTG TAATAATAGAAAATA dcuR 4549896 - 4549177 - | DNA-binding transcriptional activator DcuR TERM 5960 4549712 - 4549739 + g 72 -11.4 -3.09193 | AGATCCAATCCGTTT TCCTGCTGCATA TAGA TATCCAGCAGGA TTAGGTCAATGTGAT dcuS 4551524 - 4549893 - | sensory histidine kinase DcuS TERM 5961 4550031 - 4550051 + g 71 -4.6 -4.58395 | opp_overlap 4550017 4550021 4550018, overlap 4550019 4550025 ACCGACGCCGCGTTC GGCGCCTT TCGAC GAGACGCC TTTTTCAAAAATCGC TERM 5962 4550346 - 4550328 - G 70 -3 -4.7497 | CTTACTGAGCAAAAA GCCAGCGA TAA TCGGCGAC TTTATTTTACCCAGC TERM 5963 4551256 - 4551243 - G 91 -3.8 -5.50774 | CACAATAAACAAAAA GCCA TTATGC TGGC TCACCGCTTCGGCGA TERM 5964 4551260 - 4551299 + g 95 -8.5 -5.0133 | gap 1 CATTATGCTGGCTCA CCGCTT-CGGCGAGCGTC TGAAT GCCGCTTTCCGCAGGCGG TTTTTTCAGCCCCTC TERM 5965 4551474 - 4551443 - G 100 -10.2 -5.10933 | gap 1, opp_overlap 4551442 4551441, overlap 4551428 GCACCGAAAACAAAA CGGCGCTGACCATCA GAA TGACGGT-AGTGCCG AGTTTCATGGGGCGT TERM 5966 4551910 - 4551895 - g 100 -5.4 -5.96894 | ATGGAAATAAAAAAA TGGCTG AACA CAACCA TAACCCGACGTGATG TERM 5967 4553876 - 4553892 + G 74 -6.5 -4.36914 | opp_overlap 4553867 4553876 CAGAAGGCGAGCGAA TTCCCGC ATT GCCGGAA TTTTGTCCGGCGAAA TERM 5968 4554161 - 4554205 + G 95 -14.2 -3.25942 | gap 1, overlap 4554186 TTTTACCCGGCGTGG CGGCGATGCCG-CAGGGCGCG TGGA CGCGGCTTGACGGCAACGGCG TTGATGTCGGCGGCT STM4305.S 4551880 - 4554309 + | putative anaerobic dimethylsulfoxide reductase subunit A STM4306 4554323 - 4554949 + | putative anaerobic dimethylsulfoxide reductase subunit B TERM 5969 4554986 - 4554998 + G 71 -6.2 -4.36554 | overlap 4554985 GGTCTTTACCCAGAG CGCG GTCGG CGCG TTTATTCTGCTGCTG STM4307 4554942 - 4555715 + | putative anaerobic dimethylsulfoxide reductase subunit C TERM 5970 4555704 - 4555715 + F 70 -2.2 -5.03747 | TACAATCTGTGGACG CTGC CAAT GTAG TTTTTTGCCCGGTTT TERM 5971 4556079 - 4556092 + G 76 -3.1 -5.0538 | gap 1 ATGGGGGAAACCACC GC-CGA TTA TCGAGC TTTTTTACAGTCGCA STM4308 4555731 - 4556384 + | putative anaerobic dehydrogenase component TERM 5972 4556432 - 4556459 + T 80 -12.7 -2.95073 | overlap 4556424 4556429 4556432 TACTTGTGCCGCCAT CGTGCCCGCTG TTGCGT CAGCGGGCACA GTTTACTATTACAGC TERM 5973 4556432 - 4556460 + T 95 -12.5 -3.92592 | gap 1, overlap 4556424 4556429 4556432 TACTTGTGCCGCCAT C-GTGCCCGCTG TTGCGT CAGCGGGCACAG TTTACTATTACAGCT STM4309 4557868 - 4556468 - | hypothetical protein TERM 5974 4558198 - 4558173 - g 74 -7.5 -4.16842 | opp_overlap 4558172, overlap 4558174 TTTATTTTTAAGAAA TGCGTTACGAC ATCA GTCGTGACGCG ATCTGCTATGGATTT TERM 5975 4558197 - 4558174 - g 72 -11 -3.09784 | opp_overlap 4558172, overlap 4558173 TTATTTTTAAGAAAT GCGTTACGAC ATCA GTCGTGACGC GATCTGCTATGGATT TERM 5976 4558790 - 4558780 - g 76 -5.4 -4.79826 | AGAGATGAGCAAAAA TGGT ATC ACCA GAGCGTTGCCTTCTG STM4310 4558172 - 4559077 + | putative inner membrane protein TERM 5977 4559246 - 4559265 + F 100 -10.7 -5.76633 | GTCCTCCTCATATTT GCGGCAG CGTAGT CTGCCGC TTTTTTTGTCTATGG TERM 5978 4559303 - 4559285 - f 100 -16 -4.18018 | opp_overlap 4559275 TTTGTCTATGGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC tnpA_6 4559416 - 4559874 + | transposase for IS200 TERM 5979 4559949 - 4559981 + T 95 -11.3 -4.47551 | opp_overlap 4559956 4559978, overlap 4559953 4559955 4559956 4559978 CCTTATAGGCGCATC TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTATAAATTAACT TERM 5980 4559953 - 4559977 + T 100 -9.9 -4.79683 | opp_overlap 4559956, overlap 4559949 4559955 4559956 ATAGGCGCATCTGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTATAAATT TERM 5981 4559955 - 4559975 + T 95 -12.5 -3.99938 | opp_overlap 4559956, overlap 4559953 4559949 4559956 AGGCGCATCTGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTATAAA TERM 5982 4559956 - 4559974 + T 93 -16 -2.98878 | opp_overlap 4559956, overlap 4559955 4559953 4559949 GGCGCATCTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTATAA TERM 5983 4559974 - 4559956 - T 100 -16 -4.62069 | opp_overlap 4559956 4559955 4559953 4559949 GGCGCATCTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTATAA STM4312 4560352 - 4560083 - | hypothetical protein STM4313 4560575 - 4560360 - | putative cytoplasmic protein TERM 5984 4560413 - 4560447 + g 73 -10.8 -3.4252 | opp_overlap 4560424 TCGGTGTATTGATGT TAGTGATATTATCGCC TCC GGCGCCGATATCACTA TTATCCTCCATGGAA STM4314 4560885 - 4560598 - | putative regulatory protein STM4315 4561757 - 4560882 - | putative DNA-binding protein STM4316 4562243 - 4562022 - | putative cytoplasmic protein TERM 5985 4562685 - 4562667 - g 74 -4.5 -4.71061 | overlap 4562669 AGCCAGAGGGAAAAA CCGCACA GACTT TGTGCTG GAAGCTGCCCGCGCT STM4317 4562560 - 4562853 + | hypothetical protein STM4318 4562850 - 4563341 + | putative acetyltransferase phoN 4564341 - 4563589 - | non-specific acid phosphatase TERM 5986 4564440 - 4564429 - H 82 -5.8 -5.14477 | overlap 4564430 CATACAGGTAAAAAA GCAG GACG CTGC CCTGGCATTATCGTC TERM 5987 4565134 - 4565180 + H 74 -6 -4.64861 | gap 1, opp_overlap 4565146, overlap 4565146 TTCTTGCAAATATCA GGCGCAAAAA-AACAGACTTG CGCTAA CAAGTCTGTTCTTTAAGAGCC TTTCTTTTAACAACA TERM 5988 4565146 - 4565167 + H 77 -8.8 -3.91488 | opp_overlap 4565146, overlap 4565134 TCAGGCGCAAAAAAA CAGACTTG CGCTAA CAAGTCTG TTCTTTAAGAGCCTT TERM 5989 4565167 - 4565146 - H 100 -9.5 -5.42259 | opp_overlap 4565146 4565134 TCAGGCGCAAAAAAA CAGACTTGC GCTA ACAAGTCTG TTCTTTAAGAGCCTT TERM 5990 4565518 - 4565502 - H 76 -5.1 -4.73388 | AATTTTCACCAAAAA GTCGCTT CTG AATCGAC AAATAGAGTAATTTT STM4320 4565999 - 4566331 + | putative regulatory protein TERM 5991 4566572 - 4566543 - T 90 -14.5 -3.22906 | gap 1, opp_overlap 4566549, overlap 4566549 CCATTCCCAGAAAAG CA-AAAACCCAGCC ATA GGCTGGGTTTTCTG AATAAGTGGTGCCCG TERM 5992 4566549 - 4566565 + T 100 -13.7 -4.431 | opp_overlap 4566543 4566549 CCAGAAAAGCAAAAA CCCAGCC ATA GGCTGGG TTTTCTGAATAAGTG TERM 5993 4566565 - 4566549 - T 100 -13.7 -5.1417 | opp_overlap 4566549, overlap 4566543 CCAGAAAAGCAAAAA CCCAGCC ATA GGCTGGG TTTTCTGAATAAGTG TERM 5994 4566612 - 4566628 + T 73 -10.9 -2.62616 | opp_overlap 4566611 4566609 4566606 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yjdC 4567345 - 4566770 - | putative transcriptional regulator dipZ 4569085 - 4567382 - | thiol:disulfide interchange protein precursor TERM 5995 4568220 - 4568209 - G 81 -3.6 -5.18726 | opp_overlap 4568217, overlap 4568211 CCCCCATAACAAAAA CACC GCCG GGCG AGCCGCCTTGCTGAC TERM 5996 4568637 - 4568665 + g 71 -10.2 -3.17075 | opp_overlap 4568634, overlap 4568636 TGGGTGACAGCAGGC GTCGGCGTGGCG TCTAT TGCCGCGGCGAC TTCACTTAGCGGCAC TERM 5997 4568990 - 4568978 - G 74 -2.6 -5.02421 | overlap 4568980 AAAATCAAAAACAAA CGCC CGGTC GGCA GGGACGAACTGCGAG cutA 4569408 - 4569061 - | divalent-cation tolerance protein CutA TERM 5998 4569518 - 4569496 - R 93 -14.8 -3.30635 | overlap 4569497 CAAAGGGCGGGAGAA TGCGGGGCGT GAT ACGCCCCGCG GGTGAAACACTTACA TERM 5999 4569517 - 4569497 - R 100 -18.3 -2.5806 | overlap 4569496 AAAGGGCGGGAGAAT GCGGGGCGT GAT ACGCCCCGC GGGTGAAACACTTAC dcuA 4570830 - 4569529 - | anaerobic C4-dicarboxylate transporter TERM 6000 4570900 - 4570924 + r 95 -12.9 -3.79251 | opp_overlap 4570902, overlap 4570902 CTTCTTGTAAGAAAA AAGGCACGTCA TCG TGACGTGCCTC TTTGGTACTACCCTG TERM 6001 4570902 - 4570922 + r 100 -15.5 -3.48024 | opp_overlap 4570902, overlap 4570900 TCTTGTAAGAAAAAA GGCACGTCA TCG TGACGTGCC TCTTTGGTACTACCC TERM 6002 4570922 - 4570902 - R 100 -15.5 -5.4505 | opp_overlap 4570902 4570900 TCTTGTAAGAAAAAA GGCACGTCA TCG TGACGTGCC TCTTTGGTACTACCC aspA 4572381 - 4570945 - | aspartate ammonia-lyase TERM 6003 4571810 - 4571822 + g 74 -7.7 -4.13282 | overlap 4571801 ACGGCGTCCTGCAAC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 6004 4572245 - 4572260 + g 74 -3.2 -4.92757 | opp_overlap 4572245, overlap 4572240 ATGCCACGCACAAAT TCAGGG ATGT CGCTGA TTTTGTTATTGCTAA TERM 6005 4572702 - 4572684 - H 76 -8.8 -3.66874 | opp_overlap 4572684 GCAACCCCATTCAAA TGGTCGTC GCA GACGGCCA TGACTTACAGGAGAG TERM 6006 4572684 - 4572702 + H 73 -11 -2.52464 | opp_overlap 4572684 GCAACCCCATTCAAA TGGTCGTC GCA GACGGCCA TGACTTACAGGAGAG TERM 6007 4572873 - 4572883 + G 72 -4 -4.77036 | TGGTACGTAACCAGG GTTT TAA AAAC TTTTTGCTGATGCAA TERM 6008 4572905 - 4572883 - g 75 -6.4 -4.57569 | overlap 4572884 CCAGGGTTTTAAAAA CTTTTTGCTG ATG CAACAAAAAA TGGCGGCCGGTGAGA TERM 6009 4572931 - 4572906 - g 85 -2.5 -5.4833 | gap 1, overlap 4572907 4572908 TGATGCAACAAAAAA TGGCGGCCGG TGAGAGC CCGGCGGC-A GAAATGATTAAGAGT fxsA 4572722 - 4573198 + | FxsA TERM 6010 4573248 - 4573208 - T 78 -12.1 -2.98802 | gap 2, opp_overlap 4573223, overlap 4573223 GATTAAAGGTAGAGA TGCTGGCCGGATAAGTCGC GTGAG GCG--TTATCCGGCCAACA GATACGTCTTACGCC yjeH 4574498 - 4573257 - | inner membrane protein YjeH TERM 6011 4574616 - 4574628 + H 74 -3.3 -5.08824 | opp_overlap 4574616 AACGTGAGATAAGTA GCGTT TTT ACCGC TTTTTTCGCTCAGAA groES 4574774 - 4575067 + | co-chaperonin GroES TERM 6012 4576122 - 4576094 - g 74 -9.5 -3.72374 | overlap 4576092 TGTGATCAACAAAGA CACCACCACCATC ATC GATGGCGTGGGTG AAGAAGCTGCCATCC groEL 4575111 - 4576757 + | chaperonin GroEL TERM 6013 4576894 - 4576929 + F 100 -18.4 -4.37971 | opp_overlap 4576900, overlap 4576900 TTATCTCCCAGAATT GAGAAACCCCCGGGCA GAAA TGACCGGGGGTTTTTC TTTTAGTCATCTTTT TERM 6014 4576900 - 4576923 + F 100 -13.8 -5.50723 | opp_overlap 4576900, overlap 4576894 CCCAGAATTGAGAAA CCCCCGGGCA GAAA TGACCGGGGG TTTTTCTTTTAGTCA TERM 6015 4576923 - 4576900 - f 100 -13.8 -4.00066 | opp_overlap 4576900 4576894 CCCAGAATTGAGAAA CCCCCGGGCA GAAA TGACCGGGGG TTTTTCTTTTAGTCA yjeI 4576983 - 4577354 + | putative outer membrane lipoprotein TERM 6016 4577357 - 4577407 + T 100 -10.7 -4.7373 | gap 2, overlap 4577359 4577368 4577370 ATGTCCGAACTGATA TGTCTGAATCGTAACGCCCTCTGAA AGA TTCAGAGGGCGATATGGTT-AG-CG TTTTTCCTGCGATGA TERM 6017 4577359 - 4577406 + T 85 -12.2 -3.43756 | gap 1, overlap 4577357 4577368 4577370 GTCCGAACTGATATG TCTGAATCGTAACGCCCTCTGAA AGA TTCAGAGGGCGATATGGTT-AGC GTTTTTCCTGCGATG TERM 6018 4577368 - 4577398 + T 100 -17 -2.79809 | overlap 4577359 4577357 4577370 GATATGTCTGAATCG TAACGCCCTCTGAA AGA TTCAGAGGGCGATA TGGTTAGCGTTTTTC TERM 6019 4577370 - 4577396 + T 93 -15.2 -2.93361 | overlap 4577368 4577359 4577357 TATGTCTGAATCGTA ACGCCCTCTGAA AGA TTCAGAGGGCGA TATGGTTAGCGTTTT yjeJ 4578259 - 4577402 - | putative inner membrane protein TERM 6020 4577964 - 4577981 + g 74 -7.7 -4.14472 | opp_overlap 4577962 4577964 GCTAAAGATTCAACA CGCTGAT TAAC ATCGGCG TTTTCCAGCTCTTCA TERM 6021 4578495 - 4578509 + r 71 -3.6 -4.77438 | overlap 4578487 GGAGTCTCCTCGTAA TATTGC GCG GTAATA TTTTTCGTCGTCCCT yjeK 4579569 - 4578541 - | putative aminomutase TERM 6022 4579128 - 4579147 + g 74 -10 -3.75598 | CGGCGATATACTCCA GCGCGACT GTCC AGTTGCGC TTATTGCCTTGATTC TERM 6023 4579409 - 4579397 - G 78 -6.9 -4.63486 | overlap 4579398 4579399 ATGCGCGCAATAAAA GCGCG CGG CACGC GGAGGGCAAACAAGC efp 4579610 - 4580176 + | elongation factor P TERM 6024 4580196 - 4580217 + G 76 -12.3 -3.01831 | opp_overlap 4580196, overlap 4580193 4580191 CGTTATCGGGAAAAA TGGTGCAGC GTAT GCTGCGCCA TCCTATTTTTCGCGC TERM 6025 4580217 - 4580196 - g 91 -10.1 -4.59773 | opp_overlap 4580196 4580193 4580191 CGTTATCGGGAAAAA TGGTGCAGC GTAT GCTGCGCCA TCCTATTTTTCGCGC ecnA 4580195 - 4580371 + | putative entericidin A precursor TERM 6026 4580563 - 4580549 - g 72 -11.4 -3.02461 | overlap 4580552 TAACTGCTTGTAATA CCACGC GCG GCGTGG GCGAGGACATCTCGG ecnB 4580479 - 4580625 + | entericidin B membrane lipoprotein TERM 6027 4580626 - 4580663 + T 79 -8.6 -4.36914 | gap 1, opp_overlap 4580629 4580633, overlap 4580633 AGAGCTCAGCAGTAA TC-ATCAACGGTACGGC ATGGC GTCGTACCGTTAATCGA TTTTCTCCGGAAGCA TERM 6028 4580659 - 4580629 - T 74 -11.2 -2.80016 | opp_overlap 4580626 4580633, overlap 4580633 GCTCAGCAGTAATCA TCAACGGTACGGCA TGG CGTCGTACCGTTAA TCGATTTTCTCCGGA TERM 6029 4580633 - 4580655 + T 77 -11.3 -3.28857 | opp_overlap 4580629 4580633, overlap 4580626 AGCAGTAATCATCAA CGGTACGGC ATGGC GTCGTACCG TTAATCGATTTTCTC TERM 6030 4580655 - 4580633 - T 71 -9.8 -3.29364 | opp_overlap 4580633 4580626, overlap 4580629 AGCAGTAATCATCAA CGGTACGGCA TGG CGTCGTACCG TTAATCGATTTTCTC ecnR 4581243 - 4580656 - | putative regulatory protein sugE 4581500 - 4581817 + | quaternary ammonium compound-resistance protein SugE blc 4582367 - 4581834 - | outer membrane lipoprotein Blc TERM 6031 4581900 - 4581911 + g 83 -5.8 -4.93877 | overlap 4581885 CCGGGTCGCGACGGC CAGC ATTT GCTG TTTTATTTCCTCAGA TERM 6032 4582347 - 4582329 - G 100 -8.8 -4.93365 | overlap 4582340 GGCGACAACCAAAAA TGCCGCAG TAA CCGCAGCA ACGACGGGCAGCAAG TERM 6033 4582468 - 4582440 - R 100 -11.8 -5.83211 | overlap 4582441 CAGGAAAAGAAAAAA TGCCCTCTTATC GGGTA GATAAGAGGGCG TCGTGGCAACTTAGA TERM 6034 4582467 - 4582441 - R 100 -15.3 -4.07486 | overlap 4582440 AGGAAAAGAAAAAAT GCCCTCTTATC GGGTA GATAAGAGGGC GTCGTGGCAACTTAG frdD 4582838 - 4582479 - | fumarate reductase subunit D TERM 6035 4582705 - 4582687 - G 70 -6.6 -4.08945 | overlap 4582688 4582691 AGTACGCGCTCAAAA CTCAGGGC ATC GCCCGGAA ATAGCCCCAGCGGCA TERM 6036 4582768 - 4582736 - G 76 -12.7 -2.74012 | GCATGATGCCAACCA GTAGCACGATCACCG GCG CGATGATCGCGCCCC ACATACCGCCTGCGC frdC 4583244 - 4582849 - | fumarate reductase subunit C frdB 4583989 - 4583255 - | fumarate reductase iron-sulfur subunit frdA 4585772 - 4583982 - | fumarate reductase flavoprotein subunit yjeA 4586095 - 4587072 + | lysyl-tRNA synthetase TERM 6037 4587103 - 4587119 + F 86 -9.4 -4.43221 | opp_overlap 4587103 TTTCGCGAGATAAAA TGGCGC AATAA GCGCCA TTTTGTAGCATATTT TERM 6038 4587119 - 4587103 - f 86 -9.4 -4.52589 | opp_overlap 4587103 TTTCGCGAGATAAAA TGGCGC AATAA GCGCCA TTTTGTAGCATATTT TERM 6039 4587339 - 4587318 - g 90 -4.4 -5.34555 | opp_overlap 4587323 CCACACGATAAAAAA GATGAGCC TTATTG GGCTTATC CTGATGATTTTTACT TERM 6040 4587431 - 4587441 + G 85 -2.4 -5.5074 | CATGGTATATATTTT CTGC CTT GCTG TTTTTTATTCCATTC TERM 6041 4587824 - 4587838 + G 80 -5 -4.91084 | ATTTAGTTTTATTGT TAGTGA GTG TCGCTA TTTTGTTATTAAATG TERM 6042 4588704 - 4588719 + G 73 -9 -3.82824 | CAGCGCCTTGTGGAT GATCGG CGGC CCGATC TTCTTCTCGCTGCTG yjeM 4587298 - 4588800 + | putative amino-acid transport protein yjeO 4588852 - 4589166 + | putative inner membrane protein yjeP 4592559 - 4589233 - | hypothetical protein TERM 6043 4589749 - 4589764 + g 80 -9 -4.07885 | AATGGTCACCGTATC GCCGAT ACGA ATCGGC TTTTCAAACAAAATA TERM 6044 4590597 - 4590609 + g 84 -6.2 -5.03314 | opp_overlap 4590595 4590597 CTTTATCAAGATAGA GCGG AATGC CCGC TTTTTTCAGACTCAG TERM 6045 4592076 - 4592122 + g 79 -7.3 -4.4261 | CGGCACTTCCGCCTG CGGCGCCGAGTCGTC-GCTCAAT CTC ATTAAGCTGGCGGCG-GGCGTCG TTTTGCTGTTGGGGA psd 4593546 - 4592578 - | phosphatidylserine decarboxylase yjeQ 4594690 - 4593638 - | ribosome-associated GTPase orn 4594797 - 4595342 + | oligoribonuclease TERM 6046 4595386 - 4595352 - T 75 -11.5 -3.04144 | gap 1 CTGTGAGGCGTAACA TGCCGGATGGCAACGC CAGA GCGTCTC-ATCCGGCA GCTCTCCCCACACTG STM4351 4596144 - 4595404 - | putative arginine-binding periplasmic protein TERM 6047 4596462 - 4596446 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6048 4596694 - 4596678 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6049 4596752 - 4596738 - RH 72 -8.6 -3.76413 | CTCCAAAATTTGAAA GTGCTT GTT AAGCAC AGACCACCAATCGCA TERM 6050 4596926 - 4596910 - RH 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA yjeS 4598368 - 4597229 - | putative FeS protein TERM 6051 4598711 - 4598733 + GH 73 -11.3 -2.58822 | overlap 4598710 4598708 TGCCTGGCTGAATGC CGGCGGCAT CATCC ATGCTGCCG ATATTATCTGGCCGG TERM 6052 4599049 - 4599061 + GH 87 -10.5 -4.07568 | TGGCGAGCCAGACGC CGCCG CTC CGGCG TTTTGACGCGACGCA yjeF 4598367 - 4599914 + | hypothetical protein TERM 6053 4600087 - 4600064 - gf 72 -3.8 -4.74504 | ACGGTAATGTAAAAA GCCCCACC TATACGCT GGTAGAGC CTTATGCGATTGATA yjeE 4599886 - 4600347 + | putative ATPase amiB 4600364 - 4601683 + | N-acetylmuramoyl-l-alanine amidase II TERM 6054 4601745 - 4601733 - g 73 -9.1 -3.90291 | opp_overlap 4601739 AGCTTGCGAACCAAA TCGCC GCT GGCGA AGTGGTGGAACGCCC TERM 6055 4601915 - 4601888 - g 79 -3.2 -5.14563 | overlap 4601891 TGCGGCATTAAAAAA GAGGAGCTGGCG CTGG CGCTGGCCCGTC ATGCCACCAGTAAAA TERM 6056 4602334 - 4602317 - g 71 -4.8 -4.60889 | gap 1, overlap 4602319 AAGGACGGGCAAAAA GAGCGCC GGTTA GGCGC-C ATCTGCGGCACGCCG TERM 6057 4602333 - 4602319 - g 71 -8.5 -3.91506 | overlap 4602317 GGACGGGCAAAAAGA GCGCC GGTTA GGCGC CATCTGCGGCACGCC TERM 6058 4602733 - 4602699 - g 79 -11.4 -3.73816 | AACAGCAGACGGAAA CGGCGCTGCCGC TGGAGGAGATT GCGCCAGCGCCG CGGCATGTCCAGGAA mutL 4601693 - 4603549 + | DNA mismatch repair protein miaA 4603542 - 4604492 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 6059 4604603 - 4604630 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4604602 4604599, overlap 4604596 AATCTTTACAAGATC CGTTCCTGAACGC ATT GCGT-CGGGAACG TGTTCCAGTTTCTAT hfq 4604575 - 4604883 + | RNA-binding protein Hfq TERM 6060 4605700 - 4605727 + G 74 -10.6 -3.53563 | TCGGTGAAACCGTTC TGGCGGATACGG TAGG CTTTATCCGCCA TTTACCGCACGATCT TERM 6061 4606000 - 4605963 - g 70 -5 -4.4768 | gap 3, opp_overlap 4605994 GATGAAGAGAATAAA CCCA-TCCGCGTTTG-GCT TTC AGCGCAAA-GCGGCGTGGG AATACCACAGCTTTT TERM 6062 4606051 - 4606066 + G 74 -10.4 -3.53012 | opp_overlap 4606060, overlap 4606050 TTTCCGGCGAGGTGG CGCAGC ATAC GCTGCG TTTGCCGCCGCAGGA hflX 4604955 - 4606235 + | putative GTPase HflX TERM 6063 4606768 - 4606757 - g 71 -7.2 -4.03811 | opp_overlap 4606756 4606757 4606763 4606767 TATACCATTAAAGAA GCCG AGCG CGGC GTTGTGACGCGTTTT TERM 6064 4606763 - 4606779 + G 71 -5.7 -4.30978 | opp_overlap 4606757, overlap 4606757 4606756 4606767 ATTAAAGAAGCCGAG CGCGGCG TTG TGACGCG TTTTGGTAAATTCAG TERM 6065 4607682 - 4607663 - g 83 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC GAAT GCGCAGCG TAACGACTACCAGCG hflK 4606451 - 4607710 + | FtsH protease regulator HflK TERM 6066 4607794 - 4607810 + G 77 -7.2 -4.28762 | GTCAAAGAGGGCGAG CGCGGC ATTAC GCTGCG TTTTGGTAAAGTTCT hflC 4607713 - 4608717 + | FtsH protease regulator HflC TERM 6067 4608743 - 4608778 + F 100 -14.2 -4.37092 | gap 1, opp_overlap 4608748, overlap 4608748 GCGGTTTTAGACCAG CAAAACCACCG-CATCC AAA GGATGCCGGTGGTTTTC TTTTATAAGGGCGAT TERM 6068 4608748 - 4608773 + F 100 -14.1 -5.18371 | gap 1, opp_overlap 4608748, overlap 4608743 TTTAGACCAGCAAAA CCACCG-CATCC AAA GGATGCCGGTGG TTTTCTTTTATAAGG TERM 6069 4608773 - 4608748 - f 100 -14.1 -4.33274 | gap 1, opp_overlap 4608743 4608748 TTTAGACCAGCAAAA CCACCG-CATCC AAA GGATGCCGGTGG TTTTCTTTTATAAGG yjeT 4608796 - 4608993 + | putative inner membrane protein TERM 6070 4609466 - 4609456 - g 71 -8.2 -3.86194 | overlap 4609443 4609457 AACGCGCGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 6071 4609611 - 4609579 - g 73 -5.6 -4.56775 | opp_overlap 4609579 4609601, overlap 4609602 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4609096 - 4610394 + | adenylosuccinate synthetase TERM 6072 4610449 - 4610483 + F 78 -11.6 -3.10975 | gap 1 CAGTGTGATACATTG CTGTGTCGGGTAAGC CATTAC GCT-ATCCGACACAG TGTTAAATCCTCGCT TERM 6073 4610800 - 4610786 - g 86 -7 -5.00616 | overlap 4610787 CGTTCGGGGAAAAAA TGGCGG TAT CCGCCT GGGTAAACCGGCTAA TERM 6074 4610799 - 4610787 - g 74 -10.5 -3.60048 | overlap 4610786 GTTCGGGGAAAAAAT GGCGG TAT CCGCC TGGGTAAACCGGCTA yjeB 4610601 - 4611026 + | transcriptional repressor NsrR TERM 6075 4611188 - 4611163 - g 81 -6.8 -4.71482 | overlap 4611164 ACGAAACGTGAAAAA CCGGCCAGTC GCGAAG AACTGGCCGT AGAACTGAATATTGA TERM 6076 4611187 - 4611164 - g 73 -10.3 -3.41804 | overlap 4611163 CGAAACGTGAAAAAC CGGCCAGTC GCGAAG AACTGGCCG TAGAACTGAATATTG TERM 6077 4613324 - 4613310 - g 76 -2.7 -4.99134 | AGGTGAAAGTAAAAA CGCCG GTAAA CGTCG TCAGGTAGGTAAAAA TERM 6078 4613464 - 4613450 - g 71 -4.2 -4.54477 | overlap 4613452 CTAAAACGCAGAAAA TAGCCG CAG CGACCA AAGCGAAGCGTGCGG vacB 4611064 - 4613502 + | exoribonuclease R TERM 6079 4613529 - 4613509 - f 77 -11.2 -3.16492 | opp_overlap 4613507 4613506 4613509, overlap 4613507 GCAGAGTGAGCAATA CCCTCTTC AAACA GAAGAGGG TCAATTATCTGTAGG TERM 6080 4613509 - 4613529 + F 73 -11.2 -2.64877 | opp_overlap 4613509 4613507, overlap 4613507 4613506 GCAGAGTGAGCAATA CCCTCTTC AAACA GAAGAGGG TCAATTATCTGTAGG TERM 6081 4613712 - 4613737 + G 95 -14.7 -3.31144 | TCTGTTGCCGCTGAT CCACGCCCTTG AGTC CCAGGGCGTGG TTATCCAGCTGGCAA yjfH 4613593 - 4614324 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 6082 4614341 - 4614378 + F 90 -13.8 -3.42663 | opp_overlap 4614336 4614351, overlap 4614351 GCTGATAGTATTTTT TAAGAAAAAACCATCC ATAATC GGATGGTTTTTTTTTA TCTTTGACTGGTAAT TERM 6083 4614351 - 4614368 + F 100 -7 -6.38655 | opp_overlap 4614351, overlap 4614341 TTTTTTAAGAAAAAA CCATCC ATAATC GGATGG TTTTTTTTTATCTTT TERM 6084 4614368 - 4614351 - f 95 -7.7 -5.4505 | opp_overlap 4614351 4614341 TTTTTTAAGAAAAAA CCATCCA TAAT CGGATGG TTTTTTTTTATCTTT TERM 6085 4614542 - 4614527 - g 71 -4.8 -4.61868 | TATTGATATAGAAAA TAATGA ATCT TCATTA ATAATAAAAATGAAT yjfI 4614456 - 4614860 + | putative cytoplasmic protein TERM 6086 4615503 - 4615490 - g 72 -3.7 -4.72986 | opp_overlap 4615490 GACCTGGATGAAAAA CTGGC GCAG GCCGG TATTGGCGCAACCAA yjfJ 4614875 - 4615573 + | putative phage shock protein A TERM 6087 4615626 - 4615647 + GF 71 -7.9 -3.86524 | gap 1, overlap 4615628 TTTGTCCAGACTGAC CTGGCCC-GC TTT GCTGGGCCTG TTTATCGGGCAGTAT TERM 6088 4615628 - 4615645 + GF 72 -9.1 -3.52113 | gap 1, overlap 4615626 TGTCCAGACTGACCT GGCCC-GC TTT GCTGGGCC TGTTTATCGGGCAGT TERM 6089 4615656 - 4615666 + GF 77 -6.8 -4.41114 | GGGCCTGTTTATCGG GCAG TAT CTGC TTTGTTATCTGGTGC STM4372 4615573 - 4616643 + | putative potassium channels TERM 6090 4616688 - 4616677 - gf 74 -7.2 -4.17048 | TGCTCGGTAAAACAA GCGC GCCA GCGC CGATTCGCGGACCAT TERM 6091 4617035 - 4617047 + GF 100 -9.1 -5.03314 | opp_overlap 4617034 4617033 CAACTGGCAAGAACG GCGCT GGC AGCGC TTTTTTAACCATGAA yjfK 4616616 - 4617299 + | putative cytoplasmic protein yjfL 4617317 - 4617715 + | putative inner membrane protein yjfM 4617725 - 4618363 + | putative inner membrane protein yjfC 4618366 - 4619529 + | putative glutathionylspermidine synthase TERM 6092 4619958 - 4619972 + G 72 -3.5 -4.68724 | gap 1, opp_overlap 4619942, overlap 4619958 4619957 GGCGGGAAGTTTTGT CGC-CC GGGC GGCGCG TTTTGTATTACATGC TERM 6093 4620542 - 4620552 + G 70 -6.8 -4.18762 | GGAGTCATGGCTTAA TGCG GCG CGCA TTTTCAGTCGCCATT aidB 4619596 - 4621236 + | isovaleryl CoA dehydrogenase yjfN 4621601 - 4621281 - | putative inner membrane protein yjfO 4622016 - 4621687 - | putative lipoprotein TERM 6094 4622909 - 4622928 + G 71 -4.2 -4.56775 | opp_overlap 4622909 GCATTACGCCAGAAG CGTTGTCG GCGA CGGTAGCG TTTTTCCGACAGCAT yjfP 4622200 - 4622949 + | esterase yjfQ 4623701 - 4622946 - | transcriptional repressor UlaR TERM 6095 4623533 - 4623548 + g 85 -4.6 -5.22039 | overlap 4623534 GTTGGGTAATGGCCT CTGCGC CGTT GCGCAC TTTTTTAAGTTTCCC TERM 6096 4623778 - 4623795 + r 78 -12.7 -2.63596 | opp_overlap 4623778 AGTAAATGGAAAAAA TGCCGGG TAAT CCCGGCA TGATATCGACTCACA TERM 6097 4623795 - 4623778 - R 100 -12.7 -5.22943 | opp_overlap 4623778 AGTAAATGGAAAAAA TGCCGGG TAAT CCCGGCA TGATATCGACTCACA yjfR 4624870 - 4623806 - | putative L-ascorbate 6-phosphate lactonase ulaA 4625233 - 4626630 + | ascorbate-specific PTS system enzyme IIC sgaB 4626646 - 4626951 + | L-ascorbate-specific enzyme IIB component of PTS ptxA 4626961 - 4627425 + | L-ascorbate-specific enzyme IIA component of PTS TERM 6098 4628095 - 4628063 - g 81 -11.9 -3.60627 | opp_overlap 4628061 GCACGGCAGTTCAAA CGCTCCATTGCCCAA CTG TGGGGCTAAGGAGCG GCTATGCTGTCGAAA ulaD 4627439 - 4628089 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 6099 4628158 - 4628138 - g 90 -8.2 -4.7497 | GGCATCTATGAAAAA GCGCTCCC TGCCG GGGAGTGC TGGCTGGAGCGCCTG sgaU 4628099 - 4628953 + | L-xylulose 5-phosphate 3-epimerase sgaE 4628953 - 4629639 + | L-ribulose-5-phosphate 4-epimerase TERM 6100 4629731 - 4629714 - T 100 -12.7 -5.00616 | CTTTCCGCGAAAAAA GCCCCCT GCTC AGGGGGC AAATCAACTATGGCT yjfY 4630043 - 4629768 - | putative outer membrane protein STM4390 4630237 - 4630443 + | putative cytoplasmic protein rpsF 4630514 - 4630909 + | 30S ribosomal protein S6 priB 4630916 - 4631230 + | primosomal replication protein N rpsR 4631235 - 4631462 + | 30S ribosomal protein S18 rplI 4631504 - 4631953 + | 50S ribosomal protein L9 TERM 6101 4631979 - 4632009 + F 100 -11.9 -5.0133 | opp_overlap 4631980 4631985, overlap 4631980 TCGTTTTTGCTAGCA ACGAAACGTCGGC CCAGC GCCGACGTTTTGC TTTTTTAACCCCATC TERM 6102 4631980 - 4632008 + F 100 -15.4 -3.60316 | opp_overlap 4631980 4631985, overlap 4631979 CGTTTTTGCTAGCAA CGAAACGTCGGC CCAGC GCCGACGTTTTG CTTTTTTAACCCCAT TERM 6103 4632008 - 4631980 - f 83 -13.2 -3.14132 | opp_overlap 4631980 4631979, overlap 4631985 CGTTTTTGCTAGCAA CGAAACGTCGGC CCAGC GCCGACGTTTTG CTTTTTTAACCCCAT TERM 6104 4632003 - 4631985 - f 95 -11.7 -3.95584 | opp_overlap 4631980 4631979, overlap 4631980 TTGCTAGCAACGAAA CGTCGGC CCAGC GCCGACG TTTTGCTTTTTTAAC TERM 6105 4632084 - 4632070 - f 70 -2.2 -4.93365 | CGCGATAATCAAAAA TAAAAC ATT ATTTTA ATTTCTTGGTGAAAG TERM 6106 4632153 - 4632163 + G 70 -3.2 -4.80178 | AAAACGTCGTTTATG TGTG TGC CGCA TTTTGTTGCTTGCTA yifZ 4632101 - 4633027 + | putative permease TERM 6107 4633036 - 4633015 - T 79 -10.2 -3.61398 | TTGGTGGGTGAATAA GGTGAAGC GGTAAT GCTTCACC TGAACGAATAGGGTA ytfB 4633712 - 4633077 - | putative cell envelope opacity-associated protein A TERM 6108 4633876 - 4633903 + H 79 -4 -5.21709 | gap 1, opp_overlap 4633879, overlap 4633879 AAAGTTTTACCAGAA GAAGCGTGGCTGT TAT GCTGCC-CGCTAC TTTTTTGATATCCGA fklB 4633932 - 4634552 + | peptidyl-prolyl cis-trans isomerase TERM 6109 4634561 - 4634601 + F 95 -17 -2.52676 | gap 1, overlap 4634576 TCTGTAAGCGCCCCG GGTTTGCCGGATGATGGCG TAAA CGCC-TTATCCGGCAACCC TGGCTTCAGCAGATG TERM 6110 4634877 - 4634866 - g 71 -5.8 -4.22652 | GTAGATCAGGTAAAA GTCG CAGC CGAC GAACAGGCTCCGGCT TERM 6111 4635592 - 4635577 - g 73 -5.4 -4.62904 | gap 1, opp_overlap 4635577 AAAGATCCGGAAAAA TCGCTGC CGC GC-GCGA TTAACTCAATACCGA cycA 4634848 - 4636257 + | D-alanine/D-serine/glycine permease TERM 6112 4636340 - 4636367 + T 77 -12 -2.76696 | gap 1, opp_overlap 4636325 4636356, overlap 4636339 GGCGCCGTTTACAGC CGCCATCC-GGCA AAA TGCCCGGCTGGCG ATTATTCCCCGGCCA ytfE 4637031 - 4636369 - | cell morphogenesis/cell wall metabolism regulator TERM 6113 4636618 - 4636632 + g 74 -8.6 -4.03811 | overlap 4636609 CTGTTTGATCATGGG GAACAG GAT CTGTTC TTCTTTCATCATATG TERM 6114 4636894 - 4636927 + g 74 -9.6 -3.63744 | gap 2, opp_overlap 4636892, overlap 4636893 4636899 TATGATGTCAATATC GACGTCGTGACGCGCG GCGG CGCGCGCCA-G-CGTC TGTTTTCCGCCGCAG TERM 6115 4636899 - 4636925 + g 70 -10.1 -3.39908 | gap 1, opp_overlap 4636892, overlap 4636894 4636893 TGTCAATATCGACGT CG-TGACGCGCG GCGG CGCGCGCCAGCG TCTGTTTTCCGCCGC TERM 6116 4637144 - 4637163 + r 80 -7.1 -4.70879 | opp_overlap 4637137, overlap 4637148 TGAAATTAGCGTTCC GTGACCG GAACGA CGGTCGC TTTTTCCGGTTTCGC ytfF 4638099 - 4637134 - | putative cationic amino acid transporter ytfG 4639028 - 4638180 - | putative reductase TERM 6117 4638889 - 4638917 + g 77 -3.6 -5.09426 | overlap 4638895 TCCGCCTGGCGAACG GCAATCCCGCGC TGACT GAGCGGGGCGGC TTTTTTCGGGTTACG ytfH 4639116 - 4639502 + | putative transcriptional regulator TERM 6118 4639546 - 4639493 - T 100 -19.3 -2.79831 | gap 3 GGAACGTTTATCAGA TGGCGGCTAGCGCTTTATTCGGCCTG CCAGT CAGGCCGAATAAA-CGC-AGC-GCCA TACGGGACACACGTT cpdB 4641503 - 4639560 - | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein cysQ 4641771 - 4642511 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase ytfJ 4643058 - 4642501 - | putative transcriptional regulator ytfK 4643385 - 4643591 + | putative cytoplasmic protein TERM 6119 4643626 - 4643658 + T 77 -9.1 -3.85698 | opp_overlap 4643632, overlap 4643628 4643632 GGTTAAAAAAGTAAA AAAAAACGGCTCCTG AAT CAGGAGCCGTTGATG TTTCTGGCAAACGGA TERM 6120 4643628 - 4643656 + T 86 -11.7 -3.51934 | opp_overlap 4643632, overlap 4643626 4643632 TTAAAAAAGTAAAAA AAAACGGCTCCTG AAT CAGGAGCCGTTGA TGTTTCTGGCAAACG TERM 6121 4643632 - 4643652 + T 100 -16.9 -3.50335 | opp_overlap 4643632, overlap 4643628 4643626 AAAAGTAAAAAAAAA CGGCTCCTG AAT CAGGAGCCG TTGATGTTTCTGGCA TERM 6122 4643652 - 4643632 - T 100 -16.9 -6.31682 | opp_overlap 4643632 4643628 4643626 AAAAGTAAAAAAAAA CGGCTCCTG AAT CAGGAGCCG TTGATGTTTCTGGCA ytfL 4645019 - 4643676 - | putative hemolysin-like protein TERM 6123 4643720 - 4643734 + g 70 -3.4 -4.77165 | overlap 4643703 CATCGGGCAGTTTCG GCGCCG GTA CGTTGC TTTTATTGTCGAGAC TERM 6124 4645112 - 4645091 - R 70 -5.1 -4.41895 | opp_overlap 4645091, overlap 4645092 AACGTTTAATGAAAA CCGGCTC GTAGCAGT GAGCCGA TAAGTTCAGGGCTAG msrA 4645840 - 4645202 - | methionine sulfoxide reductase A TERM 6125 4645798 - 4645819 + g 90 -5.9 -5.26316 | opp_overlap 4645800, overlap 4645783 4645789 TGCGTCCTGGTAACG CATCTGCTT GAGT AACCAGATG TTTTTTATCAAATAA TERM 6126 4646572 - 4646583 + G 74 -7.2 -4.20042 | GGAATTGCTCTGGGC CGCC ATCA GGCG TTTTGGGATATTGAT ytfM 4646053 - 4647786 + | putative outer membrane protein TERM 6127 4648317 - 4648283 - g 100 -10.6 -4.91511 | overlap 4648284 ATGGCAGGAGAAAAA CCTGACCCTGAAACCG ACG CGGCTTCAGGGACTGC TGATCGCGCTGCCGA TERM 6128 4648316 - 4648284 - g 95 -14.1 -3.54183 | overlap 4648283 TGGCAGGAGAAAAAC CTGACCCTGAAACCG ACG CGGCTTCAGGGACTG CTGATCGCGCTGCCG ytfN 4647783 - 4651562 + | putative periplasmic protein ytfP 4651565 - 4651909 + | putative cytoplasmic protein TERM 6129 4651916 - 4651938 + T 100 -9.9 -5.1925 | gap 1, opp_overlap 4651916 4651918, overlap 4651918 CAGCCCTGAACTGAA CA-CGCCACC CTCG GGTGGCGTTG TTTTTTACATTCTGG TERM 6130 4651937 - 4651916 - T 71 -10.1 -3.17392 | opp_overlap 4651916 4651918, overlap 4651918 CAGCCCTGAACTGAA CACGCCACC CTCG GGTGGCGTT GTTTTTTACATTCTG TERM 6131 4651935 - 4651918 - T 81 -12.7 -3.14878 | opp_overlap 4651918 4651916, overlap 4651916 GCCCTGAACTGAACA CGCCACC CTCG GGTGGCG TTGTTTTTTACATTC TERM 6132 4651918 - 4651935 + T 100 -12.7 -4.67173 | opp_overlap 4651916 4651918, overlap 4651916 GCCCTGAACTGAACA CGCCACC CTCG GGTGGCG TTGTTTTTTACATTC STM4412 4653171 - 4651963 - | putative permease TERM 6133 4652105 - 4652084 - G 71 -4.3 -4.56597 | overlap 4652086 GTTGTCCGGTAAAAA TAGCCGACC ATAA GGCCTGCCA ACGTACCGCCGCCGC TERM 6134 4652807 - 4652797 - G 70 -6.8 -4.07568 | TTCTTTGTCTGAAAA CCAG TCG CTGG CGAAGCGGGACTGCT TERM 6135 4652922 - 4652907 - G 85 -6.8 -4.89393 | overlap 4652908 TAAATCCGACAAAAA CGGTCG CAAT CGACCA GATTAGCACCATCAG STM4413 4654331 - 4653168 - | putative metallo-dependent hydrolase TERM 6136 4654690 - 4654711 + r 79 -8.7 -4.20025 | opp_overlap 4654690 ATTAGCCAATAAAAA GGCCCTCAT TACT ATGAGAGCC TTTATCTTGACGCTT TERM 6137 4654711 - 4654690 - R 100 -10.9 -5.11063 | opp_overlap 4654690 ATTAGCCAATAAAAA GGCCCTCAT TACT ATGAGAGCC TTTATCTTGACGCTT ppa 4655271 - 4654741 - | inorganic pyrophosphatase TERM 6138 4655468 - 4655433 - R 83 -13.3 -3.23274 | opp_overlap 4655434, overlap 4655428 GGCCTGATAAGGCAA CGCCGCCATCGGACA TGTTAT TGCCCAATGGCGGCT TCATGCGTTATTCCG TERM 6139 4655434 - 4655467 + r 81 -12.4 -3.25169 | opp_overlap 4655433 4655428 GCCTGATAAGGCAAC GCCGCCATCGGACA TGTTAT TGCCCAATGGCGGC TTCATGCGTTATTCC fbp 4656496 - 4655498 - | fructose-1,6-bisphosphatase TERM 6140 4655568 - 4655526 - G 71 -11.3 -2.91593 | overlap 4655525 4655567 TATTCGCGGATAAAG CGTTCCACATCGTCAACCA TATGG CGGTTGCCGACGAAGAACG AGCGGCGCTGGTGCA TERM 6141 4656396 - 4656406 + g 73 -5.4 -4.63218 | TCGCGGTGGATGATC TTGG CGC CCAA TTTTATTGCCGACAG mpl 4656671 - 4658050 + | UDP-N-acetylmuramate/L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 6142 4658064 - 4658085 + F 100 -15.9 -4.52857 | opp_overlap 4658052 AAATGACTATGCGGT CAGCCAGCC TTGT GGCTGGCTG TTTTATATGGGGCAT STM4417 4658541 - 4659374 + | putative transcriptional regulator TERM 6143 4659415 - 4659380 - T 100 -12.8 -5.53991 | gap 1, opp_overlap 4659382 4659383, overlap 4659383 GACGGAGTAAAAAAA CAA-GCCGATGATCG TATTTAG CGATCATCGGCATTG TGGTGAAACTTAATC TERM 6144 4659382 - 4659412 + T 82 -11.9 -3.41527 | opp_overlap 4659380 4659383, overlap 4659383 CGGAGTAAAAAAACA AGCCGATGATCGT ATTTA GCGATCATCGGCA TTGTGGTGAAACTTA TERM 6145 4659411 - 4659383 - T 100 -14.7 -4.8487 | opp_overlap 4659382 4659383, overlap 4659380 GGAGTAAAAAAACAA GCCGATGATCG TATTTAG CGATCATCGGC ATTGTGGTGAAACTT TERM 6146 4659383 - 4659411 + T 90 -15.4 -2.64595 | opp_overlap 4659383 4659380, overlap 4659382 GGAGTAAAAAAACAA GCCGATGATCGT ATTTA GCGATCATCGGC ATTGTGGTGAAACTT STM4418 4660858 - 4659425 - | sugar transporter TERM 6147 4660316 - 4660297 - G 77 -4.2 -4.91357 | AAATACAGAACAAAA TGCAGGGA ATAA TACCCGCA GCAAACATATAGCGC TERM 6148 4661279 - 4661268 - H 79 -3 -5.29885 | opp_overlap 4661268 AATGCAAAAATAAAA TGAA AAAT TTCA TTGGTGTGTTGTTTC TERM 6149 4661564 - 4661578 + G 77 -4.3 -4.94222 | overlap 4661572 GTAAACCTGCGCTTC TGATC ATTGC GATCA TTTTTATCGCTTCTT TERM 6150 4661987 - 4662010 + G 95 -11 -4.57569 | opp_overlap 4661990, overlap 4661990 GGATCTACAGTGGAT TAACGGCCAC AGAT GTGGCCGCTA TTTTTGACAGCATGA TERM 6151 4662007 - 4661990 - g 83 -12.7 -3.17763 | opp_overlap 4661987 4661990 TCTACAGTGGATTAA CGGCCAC AGAT GTGGCCG CTATTTTTGACAGCA TERM 6152 4661990 - 4662007 + G 79 -12.7 -2.93708 | opp_overlap 4661990, overlap 4661987 TCTACAGTGGATTAA CGGCCAC AGAT GTGGCCG CTATTTTTGACAGCA STM4419 4661317 - 4662753 + | sugar transporter TERM 6153 4662800 - 4662767 - T 75 -11.1 -3.02829 | opp_overlap 4662770 4662778 4662799, overlap 4662770 4662778 GATACCTCTCCAATA TTAGCGGAGAATATC CAGA GATATTCTCCGCTGG TTACACAACCTTTAC TERM 6154 4662797 - 4662770 - T 100 -17.2 -2.73994 | opp_overlap 4662770 4662778, overlap 4662767 4662778 ACCTCTCCAATATTA GCGGAGAATATC CAGA GATATTCTCCGC TGGTTACACAACCTT TERM 6155 4662770 - 4662797 + T 100 -17.2 -2.71263 | opp_overlap 4662770 4662767 4662778, overlap 4662778 ACCTCTCCAATATTA GCGGAGAATATC CAGA GATATTCTCCGC TGGTTACACAACCTT TERM 6156 4663084 - 4663062 - T 100 -12.7 -5.46657 | GAGTTGAATAAAAAA GCCAGCCGC AGAGG ACGGCTGGC AAAGTACCACTCAAC STM4420 4663915 - 4663106 - | putative inner membrane protein STM4421 4665445 - 4663940 - | putative NAD-dependent aldehyde dehydrogenase STM4423 4665886 - 4666710 + | putative DNA-binding protein TERM 6157 4666740 - 4666759 + F 100 -10 -5.72622 | opp_overlap 4666740 TAATCGTCATGAGAA TGGTCGCA ATAC TGCGGCCA TTTTTTATTTGTCGG STM4424.S 4666985 - 4667890 + | putative endonuclease TERM 6158 4668221 - 4668200 - g 78 -6.5 -4.56597 | gap 1, opp_overlap 4668199 4668200 GTTTTCTGTGAAAAA CCGCTAGCGG TGA CGGCT-GCGG ATTGTCAGCGTGTGA STM4425 4667909 - 4668919 + | putative dehydrogenase srfJ 4669016 - 4670359 + | lysosomal glucosyl ceramidase-like protein TERM 6159 4670777 - 4670766 - g 74 -7.2 -4.1552 | opp_overlap 4670766 CAGTGGCGGAAGAAA GCCG GATG CGGC TGGCCTTTGAGCCGA STM4427 4670360 - 4671193 + | putative endonuclease STM4428 4672356 - 4671190 - | hypothetical protein TERM 6160 4671294 - 4671259 - G 93 -11.9 -4.30719 | gap 1 CGCGGCCAGAAGAAA GACCTGCTGATAGCCG ATAAA CGGCG-TCAGCAGGCC CGCTATTGGTCCGGT TERM 6161 4672402 - 4672374 - H 100 -16.7 -3.02043 | overlap 4672361 AATCGTCCTTGAACA CGCCCCTTGTCCG ATG CAGACACGGGGCG TGATGAGGCAGGCAT TERM 6162 4673416 - 4673387 - H 71 -9.9 -3.28791 | opp_overlap 4673409, overlap 4673408 ATGGCGGGGGCACAA CCGTGGCGCGATA CCAC TAACGCGCCGCAG GCGTTGCATAACGGC TERM 6163 4675668 - 4675692 + H 72 -9.3 -3.54741 | AGGCCGATCTGATTA TCGGTGTAGGG ACG CGCTATACCGA TTTCACCACCTCCTC TERM 6164 4676122 - 4676073 - H 100 -14.1 -4.07885 | gap 1, opp_overlap 4676075 GATGTTGCCGGAAAA CGCGCTGGTGGTGGCGGCGGCGGG CAG CCTGCCGG-GCGACCTCCAGCGTG TCTGGCAAAGCCGCG TERM 6165 4676075 - 4676120 + H 100 -17.5 -2.87132 | gap 1, opp_overlap 4676073 TGTTGCCGGAAAACG CGCTGGTGGTGGCGGCGGCGGG CAG CCTGCCGG-GCGACCTCCAGCG TGTCTGGCAAAGCCG TERM 6166 4676799 - 4676853 + H 72 -5.8 -4.38313 | opp_overlap 4676799 4676807 4676812 4676813 4676815, overlap 4676801 4676813 GTTTGCTTTTCAGAA CGGCAAAATAAAACGATCCGTTTTTC GCA GAACTACGGATGCTTTTCTTTTGCGG TTTTAAATTTACTAT TERM 6167 4676839 - 4676812 - H 73 -2 -5.10163 | gap 1, opp_overlap 4676801 4676799 4676813, overlap 4676807 4676799 4676813 4676815 AACGGCAAAATAAAA CGATCCGTTTTTC GCA GAACTACGGAT-G CTTTTCTTTTGCGGT TERM 6168 4676813 - 4676840 + H 73 -2 -5.10163 | gap 1, opp_overlap 4676807 4676812 4676799 4676813 4676815, overlap 4676801 4676799 ACGGCAAAATAAAAC G-ATCCGTTTTTC GCA GAACTACGGATGC TTTTCTTTTGCGGTT STM4433 4676890 - 4677912 + | myo-inositol 2-dehydrogenase TERM 6169 4677936 - 4677961 + F 81 -8.3 -4.52589 | opp_overlap 4677937, overlap 4677937 ATTAATAATGAAGAA ACTCTCGCACT GAAA AGTGTGAGAGC TTTTCTATACCGAGG TERM 6170 4677937 - 4677960 + F 82 -11.8 -3.31232 | opp_overlap 4677937, overlap 4677936 TTAATAATGAAGAAA CTCTCGCACT GAAA AGTGTGAGAG CTTTTCTATACCGAG TERM 6171 4677960 - 4677937 - f 90 -9.6 -4.39877 | opp_overlap 4677937 4677936 TTAATAATGAAGAAA CTCTCGCACT GAAA AGTGTGAGAG CTTTTCTATACCGAG TERM 6172 4678203 - 4678216 + G 74 -4.5 -4.77036 | CTCCTGGCTATCCGG CGTCT GTGT GGACG TTTTTGGTCCTAAAA TERM 6173 4678822 - 4678867 + G 73 -5.4 -4.57569 | opp_overlap 4678845, overlap 4678824 GTCTTCAACATTATC TTTGGCTGGATGGGCGATAA AATTGG TTTTCGCCGAACCATCCAGA TTTTTGGCAGCATCC STM4434 4677985 - 4679211 + | putative permease TERM 6174 4679268 - 4679296 + F 88 -7.6 -5.03314 | gap 1, opp_overlap 4679268 CATCACTAAATTAAA CCGGTTTTTATCA AGAT TGATAAA-GCCGG TTTTTTCACCCTACG STM4435 4679372 - 4680187 + | putative cytoplasmic protein STM4436 4680240 - 4681124 + | putative endonuclease TERM 6175 4681142 - 4681169 + T 86 -12.1 -3.55622 | gap 1, overlap 4681146 ACGGGTGGATTTGCC TGTACCGCGCCA CAGGC TGGCGCGGT-CA TTTGCGGCAATTACC TERM 6176 4681146 - 4681166 + T 84 -14 -2.90992 | overlap 4681142 GTGGATTTGCCTGTA CCGCGCCA CAGGC TGGCGCGG TCATTTGCGGCAATT yjgA 4681731 - 4681180 - | hypothetical protein pmbA 4681827 - 4683179 + | peptidase PmbA TERM 6177 4683238 - 4683182 - f 86 -11.6 -3.4811 | gap 1, opp_overlap 4683192 CGCCGGACAATAATA CCCGTCATACTTCAGGCTGCAGGC-GC GTTG GCTGCCTGCAACCCGAATTATTCAGGG TATTACACTTATCGT TERM 6178 4683192 - 4683228 + F 86 -11.6 -3.65201 | gap 1, opp_overlap 4683182 TAATACCCGTCATAC TTCAGGCTGCAGGC-GC GTTG GCTGCCTGCAACCCGAA TTATTCAGGGTATTA TERM 6179 4683456 - 4683441 - g 73 -6 -4.45544 | overlap 4683425 4683442 CGGCATTAACCAAAA TGCGCG CGGC CGCGCT GGATGCTCAAAAAGC cybC 4683278 - 4683664 + | cytochrome b562 STM4440 4683942 - 4684280 + | putative cytoplasmic protein STM4441 4684291 - 4684653 + | putative cytoplasmic protein TERM 6180 4684724 - 4684692 - g 81 -8.4 -4.3467 | gap 1 ACGGTGAGAGTAAAA GGCAAGGGCG-ACGC CAAA GCACGCGCCTTTGCC GATGCGCTGAACCAT STM4442 4684653 - 4684955 + | putative cytoplasmic protein TERM 6181 4684942 - 4684955 + F 72 -3.1 -5.06414 | gap 1 ACAGGGTGGATTTCG TC-GCG AAA CGCTGA TTTTTATTAAAAAGG TERM 6182 4685621 - 4685635 + G 75 -6.4 -4.5394 | opp_overlap 4685621, overlap 4685622 ATGTTACCAAAGTGA TGATGG TCG CCATCG TTTTGCTGTTTGTGT STM4443 4684978 - 4685754 + | putative inner membrane protein TERM 6183 4685943 - 4685966 + G 100 -9.4 -5.27335 | overlap 4685939 ACCGGCGTCTACGGC GCGGTCGCCG CTTT CGGCGCCAGC TTTTTATTTGCCCGC STM4444 4685766 - 4686410 + | putative inner membrane protein TERM 6184 4687008 - 4686996 - g 93 -9.1 -4.72497 | CATGCAGCAAGAAAA CGGCA ACC TGCCG CTGATGGTACATATT STM4445 4686469 - 4687602 + | dihydroorotase STM4446 4687586 - 4688704 + | putative selenocysteine synthase STM4447 4688701 - 4689330 + | putative periplasmic protein TERM 6185 4689733 - 4689694 - g 83 -12.8 -3.25088 | gap 1, opp_overlap 4689718, overlap 4689686 4689695 CTGCAAACGCAGCAA TCTCCCGCCCTGGCGCGCG GTC CGCGCACCAGC-CAGGAGC GGATACACTATTTGC TERM 6186 4689732 - 4689695 - g 89 -16.3 -2.54732 | gap 1, opp_overlap 4689718, overlap 4689694 4689686 TGCAAACGCAGCAAT CTCCCGCCCTGGCGCGCG GTC CGCGCACCAGC-CAGGAG CGGATACACTATTTG TERM 6187 4689718 - 4689755 + G 84 -6.1 -5.0538 | opp_overlap 4689695 4689694 4689686 CTGGCGCGCGGTCCG CGCACCAGCCAGGAGCG GATA CACTATTTGCTGGCGCG TTTTTTAACCTCCGC STM4448 4689457 - 4691370 + | phosphotransferase system mannitol/fructose-specific IIA component TERM 6188 4691608 - 4691590 - g 74 -7.4 -4.1899 | opp_overlap 4691583 GCATGCCAGTGAAAA CCGTCACT CTT AGCGACAG TGAAGATGCATTGAT STM4449 4691448 - 4691690 + | bifunctional antitoxin/transcriptional repressor RelB STM4450 4691680 - 4691964 + | putative inner membrane protein nrdG 4692432 - 4691968 - | anaerobic ribonucleotide reductase-activating protein nrdD 4694691 - 4692553 - | anaerobic ribonucleoside triphosphate reductase TERM 6189 4692683 - 4692650 - G 76 -10.1 -3.90744 | opp_overlap 4692655 4692660 4692661, overlap 4692626 GGGCTGCCTAAATAA CCGCACACGCGGCGG GTGA CCGAGACGCGCGCGG CGTCGTGGTTGCCGC STM4452.1N 4694896 - 4695066 + | hypothetical protein treC 4696752 - 4695100 - | trehalose-6-phosphate hydrolase TERM 6190 4696621 - 4696594 - G 87 -8.5 -4.60797 | gap 2 CGGCGAGATATAAAA CGGCGT-GA-GCC AGAT GGCGTCCACGCCG AGTCGCTGTAGATAG TERM 6191 4697662 - 4697676 + r 80 -5.6 -5.00616 | opp_overlap 4697655 4697635 4697662, overlap 4697664 GCACGATACCAAGAA TCGGCG TGC CGCCCA TTTTTTCACCGCCGA TERM 6192 4697737 - 4697722 - R 78 -4.7 -5.03994 | CGGCAGATAGAAAAA GATCG CTTCGC CGATC AACCATAAAAAATCA TERM 6193 4698186 - 4698201 + r 77 -6.8 -4.39375 | opp_overlap 4698186, overlap 4698184 CGACCAGGTCAATCA GCCGGT CGAT ATCGGC TTGTTTTACTTTGCT TERM 6194 4698398 - 4698377 - R 73 -9.5 -3.45118 | gap 1, opp_overlap 4698386, overlap 4698380 CGAGGGTAGAAGGAA TGACGATCCG GCG CGGATCG-CA GCGGCCATTGATCTG TERM 6195 4698396 - 4698380 - R 79 -12.3 -2.87274 | opp_overlap 4698386, overlap 4698377 GGGTAGAAGGAATGA CGATCCG GCG CGGATCG CAGCGGCCATTGATC treR 4699304 - 4698357 - | trehalose repressor TERM 6196 4699356 - 4699343 - H 76 -5.3 -4.84359 | TGATGGTGATAAAAA GAGTA ACTT TACTC AAGCGAAGGGCAATG TERM 6197 4699541 - 4699570 + H 77 -12.1 -2.87564 | overlap 4699543 GAGAATTTTCCTTTT CCGGTAAGCCTGC CTCT GCTGTCTTACCGG TGTGTAAGACAGTGA TERM 6198 4699619 - 4699651 + H 81 -8.3 -4.38712 | opp_overlap 4699616 4699614, overlap 4699614 4699620 TTTATTTAAACATTG CTCATCGGGCAAGGC TTT GCCGTGCCTGAAGAA TTTTCTGCGCCTGAC TERM 6199 4699620 - 4699650 + H 79 -11.8 -3.22906 | opp_overlap 4699616 4699614, overlap 4699614 4699619 TTATTTAAACATTGC TCATCGGGCAAGGC TTT GCCGTGCCTGAAGA ATTTTCTGCGCCTGA TERM 6200 4701499 - 4701538 + G 89 -13.4 -3.59262 | opp_overlap 4701502, overlap 4701502 TATTGAAGGGTTAAG CGACGACGCGCTGGCGGC GCTG GCCGCCCGTACGACGTTG TTTGCGCGTCTGACG TERM 6201 4701502 - 4701535 + G 85 -11.5 -3.93256 | opp_overlap 4701502, overlap 4701499 TGAAGGGTTAAGCGA CGACGCGCTGGCGGC GCTG GCCGCCCGTACGACG TTGTTTGCGCGTCTG mgtA 4699688 - 4702396 + | magnesium-transporting ATPase MgtA STM4457 4702958 - 4702512 - | putative transposase yjgF 4703419 - 4703033 - | putative translation initiation inhibitor pyrI 4703957 - 4703496 - | aspartate carbamoyltransferase regulatory subunit pyrB 4704905 - 4703970 - | aspartate carbamoyltransferase catalytic subunit TERM 6202 4704029 - 4704064 + g 73 -6 -4.38712 | overlap 4704014 GGCGAGCGAAAATAC CGTTGCCCGCCTGTTG GAAG TACCAGGCGTGTGGCG TTTTATCCACATCCG TERM 6203 4704952 - 4704937 - R 100 -10.4 -6.06723 | opp_overlap 4704936 4704937 CTGGGCAAAAAAAAA CCCCTC AATT GAGGGG CTTGGTATTGGTTTT TERM 6204 4704937 - 4704952 + r 71 -10.4 -2.6648 | opp_overlap 4704937, overlap 4704936 CTGGGCAAAAAAAAA CCCCTC AATT GAGGGG CTTGGTATTGGTTTT pyrL 4705042 - 4704941 - | pyrBI operon leader peptide STM4463 4705620 - 4705132 - | putative arginine repressor TERM 6205 4705749 - 4705803 + r 79 -12.2 -2.76263 | gap 1, opp_overlap 4705786, overlap 4705747 AAAAGGTGACGGCGT GCCTGATGGCGCTGTG-CTTATCAG TCCTGT CAGATAAGACGCGTCGCCATCTGGC TCGTTACATCATCGC STM4464 4707210 - 4705807 - | putative arginine repressor TERM 6206 4707096 - 4707110 + g 70 -7.1 -4.07678 | CCTCTTTTCCCAGCG TGGCG TTCAT CGCCA TTTGGTATTTTCCCG TERM 6207 4707226 - 4707265 + r 81 -12.3 -3.14211 | gap 1, opp_overlap 4707231 GATGTTCTCTCCTGA TATCAC-GGATATGCGCC GCGAG GGCGCATATCCTGTGGGA TTAGTCGCCGAGCGT TERM 6208 4707259 - 4707231 - R 81 -13.2 -2.62184 | opp_overlap 4707226 TCTCTCCTGATATCA CGGATATGCGCC GCGAG GGCGCATATCCT GTGGGATTAGTCGCC STM4465 4708270 - 4707266 - | ornithine carbamoyltransferase TERM 6209 4708366 - 4708354 - R 79 -10.5 -3.63515 | CTGTAGGCCGAATAA GGCGG AAG CCGCC ATCCGGTAAAAAGCC STM4466 4709314 - 4708382 - | carbamate kinase TERM 6210 4709107 - 4709120 + g 74 -6.7 -4.36914 | GGTAGGGTGTAACGT TAGCG TAGG CGCTA TTTTGTAGCGCCAGC STM4467 4710545 - 4709325 - | arginine deiminase TERM 6211 4711206 - 4711192 - H 82 -5.8 -5.24799 | GTATAAAGAGAAAAA TAAAAC GCT GTTTTA ACTAAGGGGATGCGA TERM 6212 4711570 - 4711552 - g 70 -5.2 -4.46212 | opp_overlap 4711554 4711565, overlap 4711554 GCGTCGACGAGAAAA CCGTCGTC CTG AACGAAGG CGACTTTGTGGTGTT yjgK 4711221 - 4711673 + | putative cytoplasmic protein argI 4712751 - 4711747 - | ornithine carbamoyltransferase subunit I yjgD 4712917 - 4713333 + | hypothetical protein TERM 6213 4713352 - 4713373 + G 100 -10.9 -5.41746 | opp_overlap 4713346, overlap 4713347 TGCATAGTATGACGG TACGGCAGC GTCT GCTGTCGTA TTTTTTTAACAGGTT miaE 4713345 - 4714157 + | hydroxylase TERM 6214 4714299 - 4714282 - T 93 -12.7 -3.72576 | TCTGTCCTGAGTAAA GCCTGCC CTGC GGCAGGC AAAAAGAACTCACTC ytgA 4714879 - 4714391 - | putative inner membrane protein TERM 6215 4714907 - 4714932 + r 89 -11.3 -4.14627 | gap 1, opp_overlap 4714906 4714903 4714899 TGAATAATAAGTGAT TCCCGGATAACA GGA TGTT-TCCGGGA TTATTTATATCAGCA yjgM 4715489 - 4714986 - | putative acetyltransferase TERM 6216 4715265 - 4715253 - G 74 -10.5 -3.46602 | TTCGCTACAGGATAA CGGCG CCA CGCCG CCGCCGCCCACCACA TERM 6217 4715621 - 4715638 + H 84 -4.9 -5.3321 | opp_overlap 4715621 4715622 4715624, overlap 4715622 AGTATCGTAGTCAAA TCAGTAA CAGT TTACTGG TTTTTATTATTAATT yjgN 4715684 - 4716871 + | putative inner membrane protein TERM 6218 4716899 - 4716880 - T 100 -15 -4.66609 | opp_overlap 4716878 TATCTGATGTAAAAA GGCCGACG TTTA CGTCGGCC CATAATTCATGTTGT valS 4719868 - 4717013 - | valyl-tRNA synthetase TERM 6219 4717268 - 4717285 + g 71 -7.7 -3.9712 | gap 1 GCCGTCGATGATTTT GGTCACGG AAA CCG-GACC TTTGTCATCGGCTGG TERM 6220 4718373 - 4718393 + g 74 -7.5 -4.07568 | overlap 4718375 ACGCTGGTGGGGTGG AACTGACGC AGG GCGTCGGTG TTTTCCGGCCAGCCG TERM 6221 4718375 - 4718391 + g 74 -10.1 -3.63744 | overlap 4718373 GCTGGTGGGGTGGAA CTGACGC AGG GCGTCGG TGTTTTCCGGCCAGC TERM 6222 4718878 - 4718858 - G 74 -9.7 -3.73775 | TTTACGGGCAGCAAA GCGTTCCAG CTT CTGGAACTC AGCCGGAATCTCGCT TERM 6223 4719637 - 4719653 + g 71 -4.3 -4.62783 | overlap 4719640 CGGCGTGGTCGGTGC CGACCTG CCA CAGGGTG TTTTTACCCTGCATA holC 4720311 - 4719868 - | DNA polymerase III subunit chi TERM 6224 4720365 - 4720419 + r 73 -10 -3.30124 | gap 2, opp_overlap 4720374 4720375 4720395 4720396 TGATGCCTCCCGTAG GCCGGATAAGCGCAGCGCCATCCGGC AAAAC GCCTGATGGCG--GCGCTAATGCGCC TTATCAGGCCTACGG TERM 6225 4720410 - 4720374 - R 82 -11.6 -3.30124 | gap 2, opp_overlap 4720365, overlap 4720375 4720395 4720396 CCGTAGGCCGGATAA GCGCAGCGCCATCCGGCA AAA CGCCTGATGGCG--GCGC TAATGCGCCTTATCA TERM 6226 4720411 - 4720375 - R 70 -10.7 -2.57931 | opp_overlap 4720365, overlap 4720374 4720395 4720396 CGTAGGCCGGATAAG CGCAGCGCCATCCGGCA AAA CGCCTGATGGCGGCGCT AATGCGCCTTATCAG TERM 6227 4720406 - 4720395 - R 71 -7.2 -4.09685 | opp_overlap 4720365, overlap 4720374 4720375 4720396 CGCCATCCGGCAAAA CGCC TGAT GGCG GCGCTAATGCGCCTT pepA 4721959 - 4720448 - | leucyl aminopeptidase STM4478 4722122 - 4722003 - | putative cytoplasmic protein yjgP 4722354 - 4723454 + | putative permease TERM 6228 4723630 - 4723577 - g 95 -8.2 -5.06451 | gap 3, opp_overlap 4723595 GATCAGCTGAAAAAA GCGGGGCAGGGTA-AC-TACGACGCGC TGG GCGCGG-GTATGTACACCCTGCTCAGC GTACCTAAGGATATC TERM 6229 4724471 - 4724493 + G 81 -8.4 -4.29227 | ATTCCGCCGATTGTC GGCGCGCT GCTGCCG AGCGCGTC TTTCTTCCTGATTAG yjgQ 4723454 - 4724536 + | putative permease TERM 6230 4724587 - 4724542 - T 79 -12.7 -2.91199 | gap 1, opp_overlap 4724547 4724565 4724568, overlap 4724546 TAAGTCGTAATCACA GTAATCGTAGGCCTGAT-GGCG CTG CGCTTATCAGGCCTACCATGAC CCGTAGGCCTGATAA TERM 6231 4724583 - 4724546 - T 82 -12.1 -3.32647 | gap 1, opp_overlap 4724547 4724565 4724568, overlap 4724542 TCGTAATCACAGTAA TCGTAGGCCTGAT-GGCG CTG CGCTTATCAGGCCTACCA TGACCCGTAGGCCTG TERM 6232 4724565 - 4724606 + T 93 -13.9 -3.53444 | opp_overlap 4724546 4724542, overlap 4724547 4724568 AGGCCTGATGGCGCT GCGCTTATCAGGCCTAC CATGACCC GTAGGCCTGATAAGTCC TTTCCGCCGCCATCC TERM 6233 4724568 - 4724603 + T 100 -16.4 -2.90496 | opp_overlap 4724546 4724542, overlap 4724565 CCTGATGGCGCTGCG CTTATCAGGCCTAC CATGACCC GTAGGCCTGATAAG TCCTTTCCGCCGCCA TERM 6234 4724753 - 4724730 - T 79 -2.5 -5.59534 | opp_overlap 4724730 AAGTAGAACAAAAAA TTTATAACG TGCTGC CGTGATAAA TCTGATAACCCAAAT idnR 4725729 - 4724731 - | L-idonate regulator TERM 6235 4725185 - 4725195 + g 71 -8.2 -3.87075 | AGATAGAGGATTTTT CGCC GCT GGCG TTTATCCAGCATGGT TERM 6236 4725616 - 4725636 + g 80 -4.6 -5.00616 | overlap 4725617 GATCTGCGCAATACG CTCGCCGG TTTCC CTGGCGAC TTTTTTCGGCGAGCG TERM 6237 4725656 - 4725671 + g 70 -3.2 -4.82901 | overlap 4725643 TTCGGCGAGCGGATG TAACGG CTCA CCGTCA TTTTTGTCACGCCAG idnT 4727112 - 4725793 - | L-idonate transport protein TERM 6238 4725994 - 4725982 - G 71 -10.5 -3.23216 | opp_overlap 4725978 4725982 4725993 CGCCAGTACCATTAA CGCCG GAT CGGCG TGGGTTACGTTAATA TERM 6239 4727158 - 4727141 - R 93 -12.7 -3.6581 | opp_overlap 4727140 4727149, overlap 4727139 ATTAGCGCCAAAATA GCAGCGC TTAC GCGCTGC GTCGTATTTCCCTGG idnO 4727938 - 4727174 - | gluconate 5-dehydrogenase TERM 6240 4727646 - 4727660 + g 76 -9.2 -4.06419 | overlap 4727651 GTAAACGGATGACGG CGCTGG ATA CCGGCG TTATTTATCAGGACG TERM 6241 4727651 - 4727692 + g 86 -7.4 -4.74453 | overlap 4727646 CGGATGACGGCGCTG GATACCGGCGTTATTTAT CAGGAC GTCAATGACGCCGATATC TTTTTCGATATGTTC idnD 4728994 - 4727963 - | L-idonate 5-dehydrogenase idnK 4729211 - 4729741 + | D-gluconate kinase yjgB 4730788 - 4729769 - | putative alcohol dehydrogenase TERM 6242 4730743 - 4730772 + g 79 -2.8 -5.22006 | gap 1, overlap 4730746 ATTCATAGAGTTCGA GCT-CGCCGCC CGCCTCTTT GGCGGCATAGC TTTTTATTATCGTCA TERM 6243 4731112 - 4731127 + H 89 -4.6 -5.72616 | opp_overlap 4731109 GTGATGCAATAATTA GCTGCC TAAT GGTGGC TTTTTTTGTGTCCAT STM4488 4731314 - 4731601 + | putative integrase TERM 6244 4732163 - 4732137 - g 91 -7.3 -4.87665 | opp_overlap 4732139 4732142 TTTGAGGGAGAAAAA GACGACGTCGA AACAG TCGATGTCATC TTGCGGCCAAAGGTT TERM 6245 4732600 - 4732612 + G 70 -9.1 -3.75229 | opp_overlap 4732591 4732592 TTAAAACGGCGCAAT CTGGC GGC GCCAG TTTCCATATCCTTTC TERM 6246 4733037 - 4733062 + G 74 -7.5 -4.21812 | overlap 4733038 ATGGCCGGACGATGG TTGCCGGAGCT GAAA AGCTTCGGCGC TTATTTTCCCTCAAG TERM 6247 4733038 - 4733061 + G 72 -11 -3.12605 | overlap 4733037 TGGCCGGACGATGGT TGCCGGAGCT GAAA AGCTTCGGCG CTTATTTTCCCTCAA STM4489 4731963 - 4735478 + | putative DNA helicases STM4490 4735575 - 4736564 + | putative restriction endonuclease TERM 6248 4736643 - 4736675 + T 79 -9.3 -4.10552 | opp_overlap 4736633, overlap 4736645 AACGACGATATTGAT TTTATCGAGGAGT TTGACCC ACTCCTCGATATA TTTAGTTTACTCCCA TERM 6249 4736645 - 4736673 + T 86 -11.9 -3.64541 | opp_overlap 4736633, overlap 4736643 CGACGATATTGATTT TATCGAGGAGT TTGACCC ACTCCTCGATA TATTTAGTTTACTCC STM4491 4738761 - 4736677 - | putative ATP-dependent Lon protease TERM 6250 4737343 - 4737357 + g 71 -8.6 -3.90744 | GAACTCCAGACCGCC CAGCTT TTT AAGCTG TTCTTTGACGCGACG TERM 6251 4738453 - 4738470 + g 74 -9.9 -3.70811 | GATCTTGTAGGATCC TCGCTCA CGAA TGAGCGA TTTCACCTTCTCTGC TERM 6252 4738682 - 4738670 - G 77 -7.7 -4.30844 | ACCCGACCACGAAAA TGCTG ATT CAGCA AGGCGTCCAGATCGT STM4492 4741369 - 4738772 - | putative cytoplasmic protein TERM 6253 4739345 - 4739325 - G 76 -5.4 -4.72272 | CCTTTCCAGCAAAAA TCATCGGC AGGAA GCTGATGA CCGATAATAAAGCGT TERM 6254 4740632 - 4740644 + g 90 -4.8 -5.40474 | opp_overlap 4740605, overlap 4740626 GGCTCTGCCTGACGG CGTG GCCAG CACG TTTTTTTCCAGCCAT STM4493 4742193 - 4741372 - | putative cytoplasmic protein STM4494 4743262 - 4742171 - | putative ABC-type sugar/spermidine/putrescine transport system ATPase component STM4495 4746939 - 4743262 - | putative type II restriction enzyme methylase subunit TERM 6255 4744532 - 4744522 - G 77 -8.2 -4.13767 | opp_overlap 4744521 TTTGTTATTTGAAAA GCCG CAA CGGC CTGTATCATCAAAAA TERM 6256 4744559 - 4744548 - G 70 -3 -4.77036 | CTGTATCATCAAAAA CAAA CCCT TTTG GACGATATCTCACGC TERM 6257 4744772 - 4744790 + g 79 -3.2 -5.23644 | overlap 4744774 CTACAAGGAAACCAT TTGATATT ATG AATGTCGA TTTTTGTATTTGATT TERM 6258 4745315 - 4745305 - G 82 -5.4 -4.99947 | opp_overlap 4745282 4745281, overlap 4745282 4745281 TTTAAGCAAAGAAAA TGCA TTC TGCA TAAACATTGCAAACA TERM 6259 4746811 - 4746834 + g 90 -6 -5.24129 | gap 1 TTCGCCGACGAGCTC GGC-ATCCGCA ATT TGCAGATTGCC TTTTTTATCAGCGGA TERM 6260 4746897 - 4746915 + g 84 -3 -5.31545 | CATCGCGGAACTGGT TACGGGCC TGT GGAGCGTA TTTTTTGATGTTATT TERM 6261 4746973 - 4746955 - R 88 -12.4 -3.61219 | overlap 4746948 4746946 AGAAAATCCTGCAAA GGGCAGCA GAG CGCTGCCC TGAAATGGGGGTTAC STM4496 4750626 - 4746985 - | putative DNA repair ATPase TERM 6262 4747103 - 4747133 + g 85 -2.6 -5.47218 | gap 1, overlap 4747111 CCACCGGTGGCTTTG CGCATCTCGCTGG CGACAT TCACC-AGATGCG TTTTTTTCGGTACCG TERM 6263 4748005 - 4748021 + g 84 -8.7 -4.36914 | overlap 4748006 CTTACGAATTTGCGA TTCGTCG TGA CGGCGAA TTTTGTGCAGACGCA TERM 6264 4748850 - 4748869 + g 71 -4.3 -4.61231 | gap 1, opp_overlap 4748837 AGTCCTGCTTATTTG CCGGATAG CGATA CT-TCCGG TTTTTCAGAATGTCA TERM 6265 4749027 - 4749038 + g 74 -2.2 -5.00616 | ACATTTCTCGTTCCA GCTT ATTC AGGC TTTTTTCAACGCGAC STM4497 4751240 - 4750638 - | putative cytoplasmic protein STM4498 4751839 - 4751237 - | putative inner membrane protein TERM 6266 4752619 - 4752661 + r 90 -15.3 -2.74514 | opp_overlap 4752623 4752628 4752632, overlap 4752623 4752628 4752632 TTTATAACAGCTTTA TAAATTAAACAAATCTGCC ATAGA GACAGATTTGTTTAATTTA TAATTAGAGGTTTGC TERM 6267 4752623 - 4752657 + r 95 -11.7 -4.05714 | opp_overlap 4752623 4752628 4752632, overlap 4752619 4752628 4752632 TAACAGCTTTATAAA TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA TTTATAATTAGAGGT TERM 6268 4752657 - 4752623 - R 100 -13.9 -3.89501 | opp_overlap 4752623 4752619 4752628 4752632, overlap 4752628 4752632 TAACAGCTTTATAAA TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA TTTATAATTAGAGGT TERM 6269 4752628 - 4752652 + r 71 -7.2 -4.17789 | opp_overlap 4752623 4752628 4752632, overlap 4752623 4752619 4752632 GCTTTATAAATTAAA CAAATCTGCC ATAGA GACAGATTTG TTTAATTTATAATTA TERM 6270 4752652 - 4752628 - R 79 -9.4 -4.13995 | opp_overlap 4752628 4752623 4752619 4752632, overlap 4752623 4752632 GCTTTATAAATTAAA CAAATCTGCC ATAGA GACAGATTTG TTTAATTTATAATTA yeeN 4753381 - 4752665 - | hypothetical protein TERM 6271 4753417 - 4753435 + r 73 -7.4 -4.05067 | opp_overlap 4753416 4753417, overlap 4753414 4753418 ATTATTTACATTAAT GGCAGGTT AAT AACCTGCA TGTTTTTCTGCCGTA TERM 6272 4753418 - 4753434 + r 75 -10.9 -3.02317 | opp_overlap 4753416 4753417, overlap 4753417 4753414 TTATTTACATTAATG GCAGGTT AAT AACCTGC ATGTTTTTCTGCCGT TERM 6273 4753902 - 4753931 + r 72 -10.2 -2.76453 | gap 1, opp_overlap 4753902 4753901, overlap 4753903 TGGATACTTTTAAAT GGAGGTATA-CCT CTTGT AGGCTATACCTCC TGCTTCACGTTATCG TERM 6274 4753931 - 4753902 - R 71 -10.2 -2.75343 | gap 1, opp_overlap 4753902 4753903, overlap 4753901 TGGATACTTTTAAAT GGAGGTATA-CCT CTTGT AGGCTATACCTCC TGCTTCACGTTATCG yjhP 4755572 - 4753941 - | putative SAM-dependent methyltransferase TERM 6275 4755025 - 4755007 - G 71 -10.2 -3.28791 | opp_overlap 4755024, overlap 4754991 4754994 AGGCCGTGCGGACAA CGCTGCCA GCC TGGCTGCG CCATGCCCTGGCGTT STM4501 4755834 - 4755577 - | hypothetical protein STM4502 4756323 - 4756931 + | putative cytoplasmic protein TERM 6276 4758004 - 4757994 - g 70 -5.4 -4.38744 | ACTTACAGAAAAGAA CAGT AGC ACTG GTTGAGCAGATCCCT STM4503 4757441 - 4758178 + | putative inner membrane protein TERM 6277 4758222 - 4758197 - f 100 -9.1 -4.95167 | opp_overlap 4758196, overlap 4758199 GAAGTAATAATAAAA TAGATCCCATT CATT AATGGGATCTC ACGTTTCATCCGATA TERM 6278 4758220 - 4758199 - f 95 -11.7 -4.07486 | opp_overlap 4758196, overlap 4758197 AGTAATAATAAAATA GATCCCATT CATT AATGGGATC TCACGTTTCATCCGA TERM 6279 4758405 - 4758424 + F 82 -2.8 -5.47159 | overlap 4758408 TGAATTAGAGTAATG TGGCGCTA TTCA TAGCGTAA TTTTTTCTGTTGCGG STM4504 4758454 - 4759365 + | putative cytoplasmic protein TERM 6280 4759419 - 4759449 + F 100 -8.3 -5.55664 | TTATTTAAATTTGTT CAGACGTCGGAAT TTTTT GTTCTGCCGTCTG TTTTTTTAGTGATGA STM4505 4759570 - 4760031 + | hypothetical protein STM4506 4760702 - 4760028 - | putative dienelactone hydrolase uxuR 4761052 - 4761825 + | DNA-binding transcriptional repressor UxuR TERM 6281 4761841 - 4761861 + T 86 -8.9 -4.4773 | opp_overlap 4761840 TTATACCTGGAATAG CGTGGGCAG ACC CAGTCCACG TTTTACTTCCTGTAG trpS2 4762839 - 4761826 - | tryptophanyl-tRNA synthetase II TERM 6282 4762487 - 4762498 + g 74 -2.2 -5.0538 | CGGGTAAAGCCTTTT TGGG CAAT CTCA TTTTTTACCGTAGGA TERM 6283 4762911 - 4762890 - H 90 -15.9 -2.64274 | opp_overlap 4762887 4762893, overlap 4762867 4762876 4762874 4762877 4762887 4762886 ACGTCCCGAAACGCA GTAGCCGCC TTTC GGCGGCTAC TTAAAGAGGGATAGT TERM 6284 4762893 - 4762908 + H 76 -11.8 -2.71011 | opp_overlap 4762867 4762876 4762874 4762877 4762890 4762887 4762886, overlap 4762887 TCCCGAAACGCAGTA GCCGCC TTTC GGCGGC TACTTAAAGAGGGAT STM4508.1N 4763136 - 4763288 + | hypothetical protein TERM 6285 4763977 - 4763993 + G 74 -7.9 -4.13995 | opp_overlap 4763958 4763956 4763955, overlap 4763978 GACGCCGAAGGCAGC GCCACGG AGA CCGTGGA TTTGGTTTATAGCCA TERM 6286 4763978 - 4763992 + G 72 -11.4 -3.07915 | opp_overlap 4763958 4763956 4763955, overlap 4763977 ACGCCGAAGGCAGCG CCACGG AGA CCGTGG ATTTGGTTTATAGCC STM4509.S 4763641 - 4764087 + | putative cytoplasmic protein TERM 6287 4764856 - 4764828 - g 81 -8.2 -4.37658 | opp_overlap 4764847, overlap 4764829 AACGTGGCGATAAAA CTGCGGC-GCAAGC GCT GCT-GCTGCCGCAA ATCGATAGCCTTATT STM4510 4764326 - 4765060 + | putative aspartate racemase yjiE 4765974 - 4765066 - | putative DNA-binding transcriptional regulator TERM 6288 4765321 - 4765303 - G 83 -6 -4.87807 | CGAAGAGACGAAAAA TGTACTGA AAC TCAGTTCA GCATGGCGAGTCAGG TERM 6289 4765984 - 4766038 + r 70 -9.3 -3.34787 | gap 2, overlap 4765985 4765994 ATCCATTTACCGTTA TC--CTGTCAGCCGCCCGAAGGGGCAT TCT ACGTCCATTCGGGCGGCTGACAACCGC TTATCCCATCCTCTT TERM 6290 4765985 - 4766037 + r 78 -12.8 -2.6039 | gap 2, overlap 4765984 4765994 TCCATTTACCGTTAT C--CTGTCAGCCGCCCGAAGGGGCAT TCT ACGTCCATTCGGGCGGCTGACAACCG CTTATCCCATCCTCT iadA 4767265 - 4766093 - | isoaspartyl dipeptidase TERM 6291 4766688 - 4766734 + g 70 -10.1 -3.34895 | gap 1 CTGACACCAGGTTTG CCCCCCAGCA-GGCCGCCAA CGCGTGAT TCGGCGGCCATGCTGGCGAG TTGATTCCCGCTGGG yjiG 4767739 - 4767278 - | hypothetical protein yjiH 4768407 - 4767736 - | putative inner membrane protein TERM 6292 4769057 - 4769025 - R 74 -10.6 -3.14344 | gap 2 GACTGGGGTGAGCAA CGGCCCGT-CA-GGGC GAG GCCCATGGATGGGCCG GGTAATCCGTAGCCA TERM 6293 4769162 - 4769128 - R 79 -9.6 -3.78034 | TAGGCAGATTAATAA CACTAAAAACCATA GAATAAG TATAGTTTTTAGTG GCATCTTTACCTTGA yjiJ 4770464 - 4769280 - | putative sugar transporter TERM 6294 4769360 - 4769346 - G 77 -3.5 -5.0133 | gap 1, opp_overlap 4769357, overlap 4769348 4769349 CAGCGCGGCAAAAAA GAGCGC CGCG GCGC-C GCAAAGCGTGGCGTT TERM 6295 4769359 - 4769348 - G 74 -7.2 -4.13561 | opp_overlap 4769357, overlap 4769346 4769349 GCGCGGCAAAAAAGA GCGC CGCG GCGC CGCAAAGCGTGGCGT yjiN 4771955 - 4770684 - | putative inner membrane protein TERM 6296 4772009 - 4772038 + r 79 -10.8 -3.5891 | opp_overlap 4772000 4772004 4772007, overlap 4772008 AAACATCAGATTATC CTGTGCCGGATA AGCCTC TATCCGGCAGAG TGTTTACTTCTCAGC yjiO 4773283 - 4772042 - | putative transport protein TERM 6297 4773784 - 4773800 + G 83 -12.3 -3.61889 | opp_overlap 4773786 AATCGACGACCTCAA CACCGCA TGA TGCGGTG TTTAAAACCTTTTTG STM4518 4773762 - 4774277 + | putative inner membrane protein TERM 6298 4775668 - 4775691 + G 71 -7.4 -4.05033 | gap 1, overlap 4775670 GCGCTAAACGCATGG CC-TCCCGGAT TGA AACCGGGATGG TTTATATCAACTGGC STM4519 4774458 - 4775828 + | putative NAD-dependent aldehyde dehydrogenase STM4520 4776066 - 4775923 - | putative cytoplasmic protein TERM 6299 4775951 - 4775963 + gF 77 -4.8 -4.84761 | TTATTTATCCACGTT GCAC TAACC GTGC TTTTTATCCCGGTAT yjiS 4776033 - 4776197 + | putative cytoplasmic protein STM4522 4776973 - 4776272 - | putative inner membrane protein TERM 6300 4777008 - 4777036 + r 100 -12.5 -4.51799 | opp_overlap 4777011, overlap 4777011 ATATGAATTATAATT AAAGCTGGCAAGG GTT CTTTGCCAGCTTA TTTTATGCGTTTACT TERM 6301 4777011 - 4777033 + r 100 -14.2 -4.35693 | opp_overlap 4777011, overlap 4777008 TGAATTATAATTAAA GCTGGCAAGG GTT CTTTGCCAGC TTATTTTATGCGTTT TERM 6302 4777033 - 4777011 - R 95 -12 -4.04295 | opp_overlap 4777011 4777008 TGAATTATAATTAAA GCTGGCAAGG GTT CTTTGCCAGC TTATTTTATGCGTTT yjiW 4777379 - 4777047 - | endoribonuclease SymE TERM 6303 4777592 - 4777574 - R 100 -11.7 -5.38549 | GGGAAATAATAAAAA GCGCACC GGGAA GGTGCGC TTGAAAATAAAGGTC hsdS 4779015 - 4777606 - | type I restriction enzyme specificity protein TERM 6304 4777786 - 4777810 + g 71 -5.7 -4.22652 | GGTGAGGCTGTTGAC GCGGGTCAG GGCGTTG TTGACCTGC TTTTCAATGGTGTCG TERM 6305 4778661 - 4778642 - G 77 -3.6 -5.1101 | overlap 4778643 CCATTAGTTAAAAAA TCTTTAGT TTTA ACTAAAGC AAACAACCAATGGGG hsdM 4780601 - 4779012 - | DNA methylase M TERM 6306 4780314 - 4780350 + g 72 -2.1 -4.95155 | overlap 4780316 TTTGGGTTGCTCAAT GGTGGTGCTGACATTAT GGA ATACCGCCTGCACCAGC TTTTTCTCATCTGAG hsdR 4784268 - 4780759 - | type I restriction enzyme EcoKI subunit R TERM 6307 4782069 - 4782092 + g 90 -6 -5.14563 | opp_overlap 4782088, overlap 4782060 CCATATCGGCATGGG CGTTGGTG ACGCAGAA CACCAGCG TTTTTTGCTGCCCGG TERM 6308 4784717 - 4784703 - g 77 -8.6 -4.08216 | overlap 4784715 CTATCCCGGGGAAAA TGGTGT TTA ACACCA GCGGGAATGAGCTGG mrr 4784466 - 4785380 + | restriction endonuclease STM4528 4785649 - 4785936 + | putative inner membrane protein STM4529 4785923 - 4786225 + | putative cytoplasmic protein yjiA 4787256 - 4786300 - | putative GTP-binding protein YjiA yjiX 4787470 - 4787267 - | putative cytoplasmic protein TERM 6309 4787523 - 4787495 - R 76 -7.5 -4.3255 | gap 2, opp_overlap 4787502 CTGTTAATGAATAAA GCCGGAT--GGCG GCTTG CGCCTTATCCGGC CTACACTAGCCGGGG yjiY 4789715 - 4787565 - | putative carbon starvation protein TERM 6310 4791080 - 4791047 - g 77 -8.2 -4.16251 | ACAGAACGCCGAAAA CGCCCGTCAG-GCCAG TCAC CTGGCGCTGA-GTGCG TCAGAGACAGCGCAA TERM 6311 4791181 - 4791163 - g 70 -5.2 -4.37886 | overlap 4791164 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATCGACGGTATTGC tsr 4790082 - 4791743 + | methyl-accepting chemotaxis protein I TERM 6312 4792147 - 4792167 + G 74 -6.8 -4.34402 | gap 1 CAGTGAGGTGTTTAC CGC-GCGCT ATCT GGCGCAGCG TTTTAATATGCAGCG TERM 6313 4794325 - 4794358 + G 75 -12.5 -2.66272 | overlap 4794304 4794321 CGTACTGGCGATAGT CGGCACGCTGG ACCCGCACATCG CCAGCGTGCCG TGGATTTCGCTCGAC STM4534 4792067 - 4794832 + | putative transcriptional regulator TERM 6314 4794864 - 4794890 + F 71 -10.8 -2.67662 | overlap 4794863 4794883 ACCCGCATCTTTTTT CGGCGCGCCA CTTTTTC TGGCACGCCG CTTGCTCTCTTTTAT STM4535 4794934 - 4795356 + | putative PTS permease STM4536 4795371 - 4795832 + | putative PTS permease TERM 6315 4796354 - 4796373 + G 70 -6.5 -4.16842 | ATATGGTTAAAGGTT TTCTGGA TGCCAT TCCAGAA TTTATTAAACATGGA STM4537 4795858 - 4796637 + | putative PTS permease TERM 6316 4796657 - 4796644 - g 71 -9.5 -3.5241 | opp_overlap 4796654, overlap 4796642 GATTTCTGATAAAGA CCGCC AGCA GGCGG AAACCACTGGTCTGG STM4538 4796627 - 4797463 + | putative PTS permease STM4539 4797476 - 4798537 + | putative glucosamine-fructose-6-phosphate aminotransferase TERM 6317 4798925 - 4798911 - g 76 -5.6 -4.77036 | overlap 4798912 CGCTATTACCAAAAA TGCGGA CTC TCCGCT GGCGCAGGCGGCGAC STM4540.S 4798555 - 4799565 + | putative glucosamine-fructose-6-phosphate aminotransferase mdoB 4801990 - 4799699 - | phosphoglycerol transferase I TERM 6318 4801030 - 4801017 - G 72 -3.8 -4.77986 | overlap 4801007 GTAAACAGCGAAAAA CGCT GGCCTG AGCG GGAAAGCGCTTCAAA TERM 6319 4801221 - 4801235 + g 71 -4.2 -4.61231 | overlap 4801222 CCCTGCACGAAATAG TTCTGG TAG CCGGAG TTTTTCAGAATATCG yjjA 4802734 - 4802273 - | hypothetical protein TERM 6320 4802464 - 4802474 + g 76 -5.4 -4.7416 | CCAACCCCAACTTGT TCAG AAT CTGA TTTTTAACGTTTTCC dnaC 4803529 - 4802792 - | DNA replication protein DnaC dnaT 4804071 - 4803532 - | primosomal protein I TERM 6321 4804048 - 4804026 - G 80 -9.2 -4.10161 | GATGATCGTGTAAAA GGACGTCA ATACCGA TGACGTCC GACGTTAAAATTCTG STM4545 4804637 - 4804164 - | hypothetical protein yjjP 4805539 - 4804628 - | hypothetical protein TERM 6322 4806706 - 4806689 - g 84 -3.3 -5.41143 | opp_overlap 4806691, overlap 4806691 TAGCGCCCAAAAAAA TAGCGCC ATGC GACGCTT ATCAATACACAGTAA TERM 6323 4806704 - 4806691 - g 71 -5.9 -4.34482 | opp_overlap 4806691, overlap 4806689 GCGCCCAAAAAAATA GCGCC ATGC GACGC TTATCAATACACAGT yjjQ 4806117 - 4806842 + | putative transcriptional regulator bglJ 4806854 - 4807477 + | DNA-binding transcriptional activator BglJ STM4549 4807986 - 4807528 - | putative cytoplasmic protein fhuF 4808925 - 4808137 - | ferric iron reductase involved in ferric hydroximate transport TERM 6324 4808236 - 4808214 - G 75 -11.3 -3.40403 | opp_overlap 4808235 TTCTGCGTACCAGAA GACCGTCGC GCATT ACGACGGTC CGCCACAGCGGGTTA TERM 6325 4808303 - 4808285 - G 90 -4.5 -5.40072 | opp_overlap 4808285, overlap 4808287 4808288 4808289 TGCTTTTCAAAAAAA CAGCGCT GGCGT AGCGTTG CCAGCAGGGCTTCGC TERM 6326 4808764 - 4808780 + g 79 -11.5 -3.72576 | opp_overlap 4808759 CTGGGCAAGAGTCAT CGCCGCT GGC GGCGGCG TTTCATCCAGCCGGA STM4551 4810110 - 4809046 - | hypothetical protein STM4552 4810361 - 4810597 + | putative inner membrane protein TERM 6327 4811091 - 4811079 - T 70 -9.1 -3.30243 | opp_overlap 4811085 4811086 ACGTAGGTTGGATAA GACGC TTT GCGTC GCCATCCGGCACATG rsmC 4812166 - 4811138 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 6328 4812242 - 4812261 + H 76 -9.2 -3.71378 | GATTTGCTATATTTG CGCCCCTG ATTA CAGGAGCG TTTCGCTATGACATC holD 4812269 - 4812706 + | DNA polymerase III subunit psi rimI 4812651 - 4813097 + | ribosomal-protein-alanine N-acetyltransferase yjjG 4813119 - 4813796 + | nucleotidase TERM 6329 4814392 - 4814378 - g 70 -7.1 -4.17425 | opp_overlap 4814378, overlap 4814370 AGAACGAGCTGAAAA TCGGC TGCGC GCCGA TCACCTGGCCGATTG TERM 6330 4815204 - 4815214 + G 81 -8.2 -4.24002 | overlap 4815203 CGATCTGATTGTTGG CGCC GTG GGCG TTTTGCAGTTTGACG prfC 4813888 - 4815477 + | peptide chain release factor 3 TERM 6331 4815488 - 4815507 + F 100 -16.4 -3.33483 | opp_overlap 4815464, overlap 4815483 ACTGATCCCTTTCCG GGCGCGGC ATCC GCCGCGCC TTCGTACTTTCCCTG osmY 4815879 - 4816496 + | periplasmic protein TERM 6332 4816509 - 4816535 + F 86 -14.5 -2.62184 | gap 1, overlap 4816509 TAATTCGTCGTAATT CGTCCTCCCGAC GTTT GTCGGGAGG-CG TAATGTGCACCACAC STM4562 4816607 - 4816786 + | hypothetical protein TERM 6333 4816817 - 4816835 + F 100 -14.6 -4.28049 | opp_overlap 4816817 ATATATTGCTATCAA GCCAGTCC AGC GGACTGGC TTTTACGGTTTTAGC TERM 6334 4816835 - 4816817 - f 90 -14.6 -3.1637 | opp_overlap 4816817 ATATATTGCTATCAA GCCAGTCC AGC GGACTGGC TTTTACGGTTTTAGC TERM 6335 4817745 - 4817717 - g 74 -10.9 -3.54543 | ATTTATCCGCCGAAA CCGCTGCACAGCA TGG CGCTGGGCAGCCG TATCCCGGCGCTGCG yjjU 4816910 - 4817983 + | putative phosphoesterase TERM 6336 4818136 - 4818154 + G 74 -8 -3.9712 | overlap 4818130 4818123 CGCGTGCTGGCGCTG GCGGCGCG TTT CCCGTCGC TTTATGCTGCGCTGG yjjV 4817980 - 4818753 + | putative deoxyribonuclease YjjV yjjW 4819649 - 4818786 - | pyruvate formate lyase-activating enzyme TERM 6337 4819594 - 4819575 - GT 77 -9.2 -3.9461 | overlap 4819576 GCCCTGTAAGAATAA TGCCAGGC GGCT GCCTGGCC CATCGACGCAGGAAA TERM 6338 4819593 - 4819576 - GT 80 -12.7 -2.96444 | overlap 4819575 CCCTGTAAGAATAAT GCCAGGC GGCT GCCTGGC CCATCGACGCAGGAA yjjI 4821171 - 4819621 - | hypothetical protein TERM 6339 4819867 - 4819857 - GH 71 -6.8 -4.19177 | ACGCGCCAAGACAAA GCTG AAC CAGC GCCTGCGGATTACGC TERM 6340 4821076 - 4821090 + gH 86 -7.1 -5.06816 | GTTTTCAGCTTCCAG CGCCA GAAAA TGGCG TTTTTGTTCAGGCGT TERM 6341 4821462 - 4821446 - g 70 -6.5 -4.20084 | overlap 4821451 ATGACTGATTTAAAA GCAAGCA GCC TGCGTGC GCTCAAACTGATGGA TERM 6342 4821959 - 4821933 - g 71 -5.8 -4.26903 | overlap 4821912 4821958 CGGATTTCATCAAAA CCTCTACCGGTA AAG TGCCGGTAAACG CTACGCCGGAAAGCG deoC 4821413 - 4822210 + | deoxyribose-phosphate aldolase TERM 6343 4822380 - 4822366 - g 71 -4.2 -4.60889 | opp_overlap 4822365 AATTATTCGTAAAAA GCGTGA TGG TCATGC GTTGAGTGACGAAGA TERM 6344 4822390 - 4822401 + G 74 -4.4 -4.70887 | opp_overlap 4822394, overlap 4822394 TCATGCGTTGAGTGA CGAA GAAA TTCG TTTCTTTATTAATGG deoA 4822334 - 4823656 + | thymidine phosphorylase TERM 6345 4823943 - 4823922 - g 77 -8 -4.11216 | GCTCTACCGGTAAAA TTGCCGCC GGCATG GACGGCAA CGCGGACGTTATTGG TERM 6346 4824103 - 4824073 - g 77 -7.7 -4.3129 | gap 2 CAGCGATCACGAAAA CAGCTT-CCC-GCAG GAA CTGCTGGATAAGCTG GTGAAACGCGCTAAC deoB 4823708 - 4824931 + | phosphopentomutase deoD 4825141 - 4825860 + | purine nucleoside phosphorylase TERM 6347 4825864 - 4825896 + T 100 -12.1 -4.49556 | gap 1, opp_overlap 4825863 4825861 4825864, overlap 4825865 4825866 4825870 GATAAAGAGTAAGAT TG-TGAAGGGGGCC AGAGCA GGCCCCCTTCATCG TTTATTTCGTCAGCA TERM 6348 4825865 - 4825895 + T 83 -13.4 -3.29252 | gap 1, opp_overlap 4825864 4825863 4825861, overlap 4825864 4825866 4825870 ATAAAGAGTAAGATT G-TGAAGGGGGCC AGAGCA GGCCCCCTTCATC GTTTATTTCGTCAGC TERM 6349 4825866 - 4825893 + T 100 -17.1 -3.20639 | opp_overlap 4825864 4825863 4825861, overlap 4825865 4825864 4825870 TAAAGAGTAAGATTG TGAAGGGGGCC AGAGCA GGCCCCCTTCA TCGTTTATTTCGTCA TERM 6350 4825870 - 4825889 + T 82 -12.1 -3.39261 | opp_overlap 4825864 4825863 4825861, overlap 4825866 4825865 4825864 GAGTAAGATTGTGAA GGGGGCC AGAGCA GGCCCCC TTCATCGTTTATTTC STM4571 4826470 - 4825898 - | putative outer membrane protein stjB 4828875 - 4826467 - | putative fimbrial usher protein TERM 6351 4826766 - 4826756 - G 77 -8.2 -4.15565 | TCCAGTACCCGAAAA GCGC TGT GCGC GACGGTAATATTCTT TERM 6352 4827689 - 4827652 - G 77 -11.3 -3.57119 | opp_overlap 4827645 4827652 4827651 CAGAGATTCGCCAAA GGACGCTTTACTGCCCA GCAT TGAGCCGGAAAACGTCC ATTTATTGGTTGGAA TERM 6353 4828721 - 4828711 - G 71 -8.2 -3.85698 | overlap 4828712 GCTGCCTGGTAGAAA GCGC GGC GCGC GGGAAAAATATTGTG TERM 6354 4828807 - 4828784 - G 74 -7.5 -4.15006 | ATACCCATGTCAAAA TTCAGCTCC TCCGCC AGAGCTGAA AACGTCGTGGTTGCC stjC 4829596 - 4828889 - | putative periplasmic chaperone protein STM4574 4830363 - 4829674 - | putative outer membrane protein STM4575 4831100 - 4830411 - | putative outer membrane protein TERM 6355 4830542 - 4830583 + g 74 -10.4 -3.51934 | gap 2, overlap 4830540 TAAAAGCAACGGGGC CATTTCCATCGCCGACACTA TATG TAGTG-CGG-GTTGGAAATG TATTTGTAAGCGCAA TERM 6356 4831244 - 4831217 - R 76 -4.2 -5.06414 | opp_overlap 4831219 4831239, overlap 4831219 CTTGGTTAAGAAAAA CTTTAATCATCA TTGG TGATGATAAATG GTTTATAATTCGCTG TERM 6357 4831370 - 4831411 + r 86 -11.9 -3.53343 | opp_overlap 4831374 4831377, overlap 4831374 4831377 ATATGTTGTTATGTT TAAATAATATCAGAGACAC ATTC GTCTCTCTGATATTATTCA TTTAGCGCACAGCTT TERM 6358 4831407 - 4831374 - R 88 -12.7 -3.57144 | opp_overlap 4831374 4831370 4831377, overlap 4831377 GTTGTTATGTTTAAA TAATATCAGAGACAC ATTC GTCTCTCTGATATTA TTCATTTAGCGCACA TERM 6359 4831374 - 4831407 + r 88 -12.7 -3.51232 | opp_overlap 4831374 4831377, overlap 4831370 4831377 GTTGTTATGTTTAAA TAATATCAGAGACAC ATTC GTCTCTCTGATATTA TTCATTTAGCGCACA TERM 6360 4831377 - 4831404 + r 80 -10 -3.89354 | opp_overlap 4831374 4831377, overlap 4831374 4831370 GTTATGTTTAAATAA TATCAGAGACAC ATTC GTCTCTCTGATA TTATTCATTTAGCGC TERM 6361 4831404 - 4831377 - R 80 -10 -3.92542 | opp_overlap 4831377 4831374 4831370, overlap 4831374 GTTATGTTTAAATAA TATCAGAGACAC ATTC GTCTCTCTGATA TTATTCATTTAGCGC lplA 4832429 - 4831413 - | lipoate-protein ligase A TERM 6362 4832036 - 4832047 + g 83 -7.2 -4.56775 | CGGAGACTTTGCGAT CGCC GTCC GGCG TTTTTACGACCAGAT smp 4833107 - 4832463 - | hypothetical protein serB 4833224 - 4834192 + | phosphoserine phosphatase TERM 6363 4834538 - 4834567 + G 83 -8.5 -4.41494 | gap 1 AGTTTGACCGCGTGC TGG-GCGGCGGGGT GGT ACCCGGCAGCGCCA TTTTGATTGGCGGTA radA 4834276 - 4835658 + | DNA repair protein RadA TERM 6364 4836687 - 4836668 - g 79 -7.2 -4.4891 | gap 1, opp_overlap 4836666 4836664 4836668 CCGACTACGATAAAA TTGCGC-TG GGC CATGCGCAA TATATTGATTTCGCA nadR 4835809 - 4837041 + | nicotinamide-nucleotide adenylyltransferase TERM 6365 4837082 - 4837050 - T 76 -12 -2.74443 | opp_overlap 4837059, overlap 4837049 4837045 GGGATAAGAACCAAT GCCTGATGCGACGC TTACC GCGTCTTATCAGGC CTACAGTTTCACAAC TERM 6366 4837113 - 4837157 + T 72 -5.6 -4.42806 | gap 1, overlap 4837114 GTACTGGAATCGCTG GGTTTGTAGGCCGGGTAAGCG CAAG CGCC-ACCCGGCATTCAGACA TTTATTTGGCAATAC yjjK 4838826 - 4837159 - | putative ABC transporter ATP-binding protein TERM 6367 4838334 - 4838301 - G 76 -11.7 -3.13403 | gap 1, overlap 4838299 GCTTTTCCAGCAACA GACGGCACAGCGCCAC GCG ACGGCGCT-CGCCGCC GGACAGTTTTTCGAC TERM 6368 4839689 - 4839672 - g 71 -7.7 -3.92324 | opp_overlap 4839675, overlap 4839673 CGGCGGAATATCAAA CGATCGC CTCA GCGATCA TTACCCTCGCTAATG TERM 6369 4839879 - 4839867 - g 84 -9.1 -4.29227 | opp_overlap 4839872, overlap 4839871 TTAATGAGGAACAAA CGCAG GCG CTGCG CGATATCGTTGCCTG slt 4839035 - 4840972 + | lytic murein transglycosylase TERM 6370 4841113 - 4841139 + G 100 -13.8 -4.1711 | GGAGTTACTCCGTCA GGCATATGCAGA GGA TCTGCATCTGCC TTTATTACAACTGAT trpR 4841030 - 4841356 + | Trp operon repressor TERM 6371 4841404 - 4841377 - T 70 -9 -3.30124 | opp_overlap 4841378 TCGTAGGCCGGATAA GGCGAAGCGGCC ATCC GGCAACATCGCC GCGAAATGCCTGATG yjjX 4841973 - 4841458 - | NTPase TERM 6372 4842232 - 4842202 - g 73 -6 -4.37886 | TTAGGCCGCACAAAA CGCACGGCGGAG ATTATCG CCCAGGCGTGCG GGTGTGATATCACCT gpmB 4842022 - 4842669 + | phosphoglycerate mutase rob 4843535 - 4842666 - | transcriptional regulator creA 4843747 - 4844220 + | hypothetical protein TERM 6373 4844427 - 4844467 + G 71 -6.1 -4.2828 | gap 1, overlap 4844425 4844430 CAGCGGCTTTGAGCT GTGTCGGCAGTTGCTGGA ACGCCA TCCTGCG-CTGCCGATTC TTTTCCTGACTGCCC TERM 6374 4844430 - 4844464 + G 81 -8.6 -4.26327 | gap 1, overlap 4844425 4844427 CGGCTTTGAGCTGTG TCGGCAGTTGCTGGA ACGCCA TCCTGCG-CTGCCGA TTCTTTTCCTGACTG creB 4844233 - 4844922 + | DNA-binding response regulator CreB TERM 6375 4845874 - 4845850 - g 73 -9.1 -3.85817 | opp_overlap 4845861, overlap 4845836 4845851 AGGCGCTGGTAGAAA CCCTGCTGCGC CAG GCGCGGCTGGA AAACCGACAGGATAT TERM 6376 4846163 - 4846176 + G 77 -8.1 -4.10007 | TGGTATTCCTGATTT TGCGC TGCC GCGCA TTTTCGACCGATTCT creC 4844922 - 4846346 + | sensory histidine kinase CreC TERM 6377 4846581 - 4846549 - g 75 -12.8 -2.62616 | gap 1 CTATTCGTCAGAGTA CCAGCG-GCCCACAA AAGG TTGTCGGCCCGCTGG TGGCGATTCCGGTGA creD 4846404 - 4847753 + | hypothetical protein sthE 4848896 - 4847811 - | putative major fimbrial subunit TERM 6378 4847855 - 4847875 + g 70 -5.3 -4.46212 | overlap 4847847 4847857 TGGCATTCGCTTGCC CGGCCGTTA CCG TGGCGGCGG TTTTATAGTAGCGCG TERM 6379 4848032 - 4848022 - G 83 -8.2 -4.41348 | overlap 4848007 4848008 4848023 4848024 CTGCCGGTAAAGAAA CCGG CGT CCGG CGCCTGAATACCCAA sthD 4849494 - 4848937 - | putative fimbrial subunit sthB 4852049 - 4849512 - | putative fimbrial usher protein TERM 6380 4850869 - 4850881 + g 71 -10.5 -3.30441 | AGCGTACTCTCTATT CCGCC ATA GGCGG TTATGCCGCCTGCTA TERM 6381 4851464 - 4851477 + g 70 -6.7 -4.20106 | overlap 4851452 TACCAGGGCGCAGGT TAGCG TATT CGCTA TTTTCCGTCCGGTTT sthA 4852778 - 4852095 - | putative fimbrial chaparone STM4595 4853394 - 4852849 - | putative fimbrial chaparone TERM 6382 4853463 - 4853447 - R 72 -5.3 -4.56358 | opp_overlap 4853436, overlap 4853432 GATAGCCATATAAAA TAAAATA TTA TATTTTA CTCTGTATGCGCTTC STM4596 4854404 - 4853733 - | putative inner membrane protein TERM 6383 4854762 - 4854717 - R 89 -8.9 -4.70046 | gap 1, overlap 4854721 4854747 4854748 GAGAAAAGTACAAAA TGCAGGCGGGCGGCGTTTT-AC TGA GCGAAATCGCCGCCTGCCGGAA CTCCTCCCGGCGGGA TERM 6384 4854758 - 4854721 - R 79 -12.7 -2.83208 | gap 1, overlap 4854717 4854747 4854748 AAAGTACAAAATGCA GGCGGGCGGCGTTTT-AC TGA GCGAAATCGCCGCCTGCC GGAACTCCTCCCGGC STM4597 4855103 - 4854789 - | putative periplasmic protein TERM 6385 4855342 - 4855316 - R 100 -13.1 -4.38927 | opp_overlap 4855316 GGGGGACATAAGAAA CAGCCAGTAAG AATAA CTTACCGGCTG TTTTTACAGTTTGGC TERM 6386 4855316 - 4855342 + r 95 -10.9 -4.70879 | opp_overlap 4855316 GGGGGACATAAGAAA CAGCCAGTAAG AATAA CTTACCGGCTG TTTTTACAGTTTGGC arcA 4856086 - 4855370 - | two-component response regulator yjjY 4856182 - 4856322 + | putative inner membrane protein TERM 6387 4856924 - 4856936 + G 74 -7.7 -4.13767 | CCCTTGCCGACGCAC TCCAC GAT GTGGA TTTTACCGTAGCGAC lasT 4856722 - 4857408 + | putative RNA methyltransferase SEQUENCE gi|17233403|ref|NC_003277.1| Salmonella typhimurium LT2 plasmid pSLT, complete sequence (length 93939) PSLT001 94 - 378 + | putative cytoplasmic protein TERM 1 752 - 768 + G 73 -5 -4.56597 | CCAGCTATTGCGGCA CCGTCC GTTCA GGCCGG TTTTTCACCGGAGGG PSLT002 712 - 1155 + | putative phospholipase D repC 1334 - 1600 + | replication protein TERM 2 1798 - 1752 - g 100 -8.2 -5.1417 | gap 1 CCAGAAAAGCAAAAA CCCCGATAATCTTCTCATTTC TTGGCG GGAACGA-AAGATTAACGGGG CCTACTTAAACTGTA repA3 1723 - 1845 + | DNA replication protein tap 1850 - 1927 + | plasmid replication control protein TERM 3 1978 - 1967 - g 75 -5.8 -4.64766 | CCGACAGGTCAAAAA TCCG AATC CGGA ATTCACGCCGAGAGA TERM 4 2593 - 2580 - g 74 -9.5 -3.6682 | CTGCACGGACTGAAA CGCGC CCGG GCGCG GCGTGACGCGGACAG repA 1908 - 2789 + | replication protein TERM 5 3324 - 3362 + F 100 -13.6 -4.3129 | opp_overlap 3324 TCCCACCACTGAAAA GCGCCGCCGCCCCGGCCC AAA GGGCCGGAATGGAGTCGC TTTTAATAATGAATG TERM 6 3362 - 3324 - f 100 -15.8 -4.21194 | opp_overlap 3324 TCCCACCACTGAAAA GCGCCGCCGCCCCGGCCC AAA GGGCCGGAATGGAGTCGC TTTTAATAATGAATG PSLT007 3730 - 3870 + | putative outer membrane protein srgC 4725 - 3967 - | putative regulatory protein TERM 7 4616 - 4598 - G 71 -4.6 -4.60487 | opp_overlap 4598 TACCACCGGTAAAAA TGCATC TCTGTCT GATGCA CTTTCGTCAGGACAA TERM 8 4947 - 4974 + r 100 -17.8 -3.82218 | gap 1, opp_overlap 4940 TCATCATATCTGACC GGGAGCGGAAGCC TGC GGCT-CCGCTCCC TTTCCTGCTCTCCGT rcK 5549 - 4992 - | resistance to complement killing srgB 6538 - 5639 - | putative outer membrane protein TERM 9 6298 - 6345 + g 72 -2.5 -4.96501 | gap 1, opp_overlap 6287, overlap 6300 6301 CAAACAGCGTTCTGC TGTCCGGGTTCCATGTCAGGCC GGAGA GGCC-GCCGTGTATCCCGGTAA TTTCTTTTTCTGCCG TERM 10 6413 - 6457 + g 76 -9.4 -4.06904 | gap 2, opp_overlap 6407, overlap 6415 CGGGAAACACAGGGT G-AGCAC-GCCGGCCGCCAT CAGGAGA ATGGCGGTCAGCAGTGCTGC TTTCTGATTACATAA TERM 11 6415 - 6454 + g 76 -12.2 -3.0682 | gap 1, opp_overlap 6407, overlap 6413 GGAAACACAGGGTGA GCAC-GCCGGCCGCCAT CAGGAGA ATGGCGGTCAGCAGTGC TGCTTTCTGATTACA srgA 7324 - 6671 - | putative thiol-disulfide isomerase or thioredoxin TERM 12 7297 - 7280 - G 72 -4.1 -4.75934 | overlap 7282 CAAAAAAGAAAATAA TATTCCC TTCA GGGAAAA CAGATCCCGGGCATA TERM 13 7552 - 7534 - R 74 -5.4 -4.67607 | opp_overlap 7534 GGCGTAATAAATAAA TTTCATGA ACA TCATAAAA TAACTTTCAGTGATA orf7 7919 - 7569 - | putative regulatory protein TERM 14 7753 - 7776 + g 78 -12.4 -3.28712 | opp_overlap 7753 TTGACGCTGCGAAAA CAGAGGGCAG CAAT CTGCCCGCTG TTATAGCCCCGCAGC TERM 15 7776 - 7753 - G 91 -12.4 -4.08767 | opp_overlap 7753 TTGACGCTGCGAAAA CAGAGGGCAG CAAT CTGCCCGCTG TTATAGCCCCGCAGC pefI 8116 - 7904 - | regulator TERM 16 8532 - 8546 + r 72 -6.4 -4.20918 | TGCCTTGCTTATGTG GCGTGA AGA TTACGC TTTATTGCAGTTGCA orf6 9423 - 8548 - | putative outer membrane protein orf5 10233 - 9676 - | putative outer membrane protein pefD 10940 - 10248 - | chaperone TERM 17 10674 - 10686 + g 70 -5.5 -4.41494 | GTCCGTCTTCATGAT GCGGA TAA TCTGC TTTTCCTTGGGCCTG TERM 18 10723 - 10713 - G 74 -8.2 -3.9392 | CCTGACCTTAAAGAA CGGC GGC GCCG GTACCATATACACCG TERM 19 10806 - 10821 + g 80 -9 -4.11304 | ATCCGCCTGGTTGGT CACCTC AAAT GAGGTG TTCTTTCTCCCTTCC pefC 13341 - 10933 - | usher protein TERM 20 11008 - 10994 - G 73 -5.6 -4.65895 | overlap 10995 CCTTTCACTGAAAAA TGGCAG ACA CTGCCG TCCCCCCGCTCGACG TERM 21 12266 - 12279 + g 77 -3.8 -5.11033 | AACATGCCGTTTTCA CCGT CAGCGA ACGG TTTTTTCAGCTTATA TERM 22 13180 - 13203 + g 100 -13.2 -4.25104 | gap 1, opp_overlap 13193 GTCGACATAATACTG TCCGGC-CGGA AAA TCCGAGCCGGA TTTTAATACGGAGGG TERM 23 13203 - 13193 - G 70 -6.8 -4.07568 | opp_overlap 13180 TGTCCGGCCGGAAAA TCCG AGC CGGA TTTTAATACGGAGGG TERM 24 13503 - 13532 + r 79 -9.9 -3.66378 | opp_overlap 13506 13507, overlap 13506 ACGAACAAGGTAATT AAATGCGGCGCAC GGCG GTGCGCCGCGTCA TTTAAATAAAATATG TERM 25 13506 - 13529 + r 93 -16 -2.94322 | opp_overlap 13506 13507, overlap 13503 AACAAGGTAATTAAA TGCGGCGCAC GGCG GTGCGCCGCG TCATTTAAATAAAAT TERM 26 13529 - 13506 - R 100 -13.8 -3.97659 | opp_overlap 13506 13503, overlap 13507 AACAAGGTAATTAAA TGCGGCGCAC GGCG GTGCGCCGCG TCATTTAAATAAAAT TERM 27 13528 - 13507 - R 100 -17.3 -2.97511 | opp_overlap 13506 13503, overlap 13506 ACAAGGTAATTAAAT GCGGCGCAC GGCG GTGCGCCGC GTCATTTAAATAAAA pefA 14087 - 13569 - | major fimbrial subunit TERM 28 13838 - 13810 - G 73 -10.3 -3.41602 | opp_overlap 13832 TCCAGGGCAGCAGAA GCCCAGGAAACAG TGG CCGTTTTCTGAGC CAGATTTGCACAACC pefB 14664 - 14362 - | regulatory protein TERM 29 14503 - 14490 - G 77 -4.5 -4.84527 | TGGACACACCAAAAA CAAGG TAGT CCCTG AGTGCCTGAATAATC TERM 30 14716 - 14704 - RH 75 -6.3 -4.52589 | TGTTGTGACAGAAAA TTTCC AAA GGAAA CAAACTTTATGCCGG TERM 31 15758 - 15746 - RH 77 -3.4 -5.14477 | overlap 15735 15733 GATAGATGTAAAAAA CATC CAAGT GATG AAGTGATACCGGAGT repA2 17625 - 16636 - | DNA replication protein TERM 32 17471 - 17488 + Gg 70 -3.3 -4.7657 | overlap 17472 TCTTCCGACGCATCA GTACGCG AAAG CGTGTTC TTTTTACGGTTTTTC PSLT024 17369 - 17677 + | hypothetical protein PSLT025 18415 - 18119 - | putative cytoplasmic protein TERM 33 18885 - 18912 + r 79 -12.1 -3.2048 | overlap 18886 GTTATATATTTACGT TTACCTGTCCC CTCTCA GGGACAGGTAG TTGATCCAGTTTGCA TERM 34 18886 - 18911 + r 80 -13.4 -2.51966 | overlap 18885 TTATATATTTACGTT TACCTGTCCC CTCTCA GGGACAGGTA GTTGATCCAGTTTGC PSLT026 19420 - 18899 - | putative periplasmic protein TERM 35 19964 - 19946 - H 70 -4.7 -4.49344 | AAATGCACGAGAAAA TACATAT AAGAG ATATGTA GATAATGGCGGCGAA ccdA 20096 - 20314 + | plasmid maintenance protein CcdA ccdB 20316 - 20621 + | plasmid maintenance protein CcdB PSLT029 20623 - 20913 + | putative cytoplasmic protein PSLT030 20910 - 21431 + | putative cytoplasmic protein TERM 36 21820 - 21783 - g 88 -11.3 -4.08394 | gap 1, opp_overlap 21812 21813, overlap 21794 ACAGCGGGCGGAAAA GGCGGCCAGAACGGCA GGACGGA TGCCGTCC-GGCAGCC AGCCCCACCGCCTGG TERM 37 21818 - 21794 - g 74 -11.3 -3.30903 | opp_overlap 21812 21813, overlap 21783 AAAAGGCGGCCAGAA CGGCAGGACGG ATG CCGTCCGGCAG CCAGCCCCACCGCCT rsdB 21466 - 22248 + | resolvase PSLT032 22257 - 22808 + | putative diguanylate cyclase/phosphodiesterase TERM 38 23458 - 23436 - g 74 -7.6 -4.16943 | opp_overlap 23447, overlap 23439 GGTGATACGGCAAAA CTAGCCGCCT GGC AGGCAGCCTG CCCGGTCCGGGAGGC PSLT032.1N 22974 - 23483 + | hypothetical protein PSLT033 23477 - 23962 + | putative inner membrane protein TERM 39 24289 - 24301 + F 79 -10.5 -3.48276 | CATCGCGTCCCGGAT CGGGC AGA GCCCG TTCTCTGCCGACCGG TERM 40 24832 - 24815 - f 71 -6.9 -4.08216 | TGACCGGCTGGAAAA CCTCCCC GGAT GTGGAGG ACTACGAAGAGCGTC PSLT036 25877 - 26140 + | putative transposase TERM 41 26152 - 26162 + T 79 -8.2 -4.23007 | opp_overlap 26152 GTAGCCTGCCCTAAA GCCC TTC GGGC TTTTCGCCTTATATC TERM 42 26177 - 26197 + T 71 -10.3 -2.72263 | overlap 26177 CTTTTCGCCTTATAT CCCCGCCCG CAT TGGGCGAGG GTTTACAGCGGATCT TERM 43 26177 - 26198 + T 75 -10.1 -3.54307 | gap 1, overlap 26177 CTTTTCGCCTTATAT CCC-CGCCCG CAT TGGGCGAGGG TTTACAGCGGATCTT spvD 26917 - 26267 - | hydrophilic protein TERM 44 26594 - 26584 - G 72 -4 -4.77036 | GCTCATGACCAAAAA TGAT TTT ATCA ACAATGGCGCTGTCT spvC 27903 - 27178 - | hydrophilic protein spvB 29966 - 28191 - | hydrophilic protein TERM 45 28676 - 28690 + g 78 -5.7 -4.70515 | opp_overlap 28675 TTGTGGAAAGATAGT CTCTG GAGAG CAGAG TTTCTTTTGCCTGTG TERM 46 29978 - 30009 + r 72 -5.8 -4.5442 | opp_overlap 29983, overlap 29980 29982 29983 ACATACACTATCTCC TGAAACTGGCCGTC TGAC GATGGCCAGGTATA TTTTCTGCTTACAGC TERM 47 29982 - 30005 + r 72 -8.8 -3.51909 | opp_overlap 29983, overlap 29980 29978 29983 ACACTATCTCCTGAA ACTGGCCGTC TGAC GATGGCCAGG TATATTTTCTGCTTA TERM 48 29983 - 30004 + r 78 -12.3 -2.70061 | opp_overlap 29983, overlap 29982 29980 29978 CACTATCTCCTGAAA CTGGCCGTC TGAC GATGGCCAG GTATATTTTCTGCTT TERM 49 30004 - 29983 - R 75 -10.1 -3.54741 | opp_overlap 29983 29982 29980 29978 CACTATCTCCTGAAA CTGGCCGTC TGAC GATGGCCAG GTATATTTTCTGCTT spvA 30915 - 30148 - | outer membrane protein TERM 50 30956 - 30942 - R 72 -5 -4.65263 | overlap 30952 30953 ACTCCTGAAAATAAA CAGAAT GAA ATCCTG AAGACTGATAATGTC spvR 32320 - 31427 - | regulator of spv operon TERM 51 33449 - 33459 + G 70 -5.4 -4.38712 | CTCAGGAGCAGACTG CACA TCC TGTG TTTTATCAGGATGAA PSLT042 32929 - 33966 + | putative integrase protein TERM 52 34068 - 34058 - T 70 -2.4 -4.99134 | ACTGCAAATGAAAAA CGCC ACC GGCT CACATTAGGTGATAA PSLT043 35180 - 34155 - | type II secretion system protein TERM 53 34580 - 34568 - GT 78 -6.3 -4.62069 | CGTCCAGTGTAAAAA TATCG GTA CGATA GCCAATTTCCTCCAT TERM 54 34743 - 34754 + gT 71 -7.2 -4.05875 | opp_overlap 34743 34742, overlap 34742 TTCATCAACAAACAG CGCC ACCG GGCG TTTGCCTTTTTTGAC rlgA 36777 - 35113 - | putative integrase protein TERM 55 36472 - 36495 + gr 95 -10.2 -4.62622 | CAGCTGTATTGCCCG TCCGGTCGAC AGAT GGCGGCCGGA TTTATTTGTGGTTCG PSLT045 37321 - 36761 - | putative resolvase TERM 56 37202 - 37216 + g 72 -3.5 -4.83169 | gap 1, overlap 37199 GCTCCTTCCGGTCCG GCC-GC TTCC GCTGGC TTTTTCTGCACGAAT TERM 57 37415 - 37395 - R 80 -9.8 -3.95126 | opp_overlap 37408, overlap 37408 37410 TAAAAACAACCCAAA TGAGACAG AAAAA CTGTCTCA CCAGACTGTGCGTTT TERM 58 37423 - 37408 - R 72 -3.2 -5.06505 | opp_overlap 37408, overlap 37395 37410 AATGAGACAGAAAAA CTGTCT CACC AGACTG TGCGTTTTGGGTGTA PSLT046 38268 - 37528 - | putative carbonic anhydrase TERM 59 37615 - 37627 + g 71 -4.8 -4.62904 | ATCTTCCAGTTGTTT CAGC ACCGG GCTG TTTTTGCGGATGTTT TERM 60 38211 - 38201 - G 70 -6.8 -4.12532 | overlap 38206 CCGGTGACAGACAAA GCAG ATA CTGC AAGAGTTTGTTTCAG TERM 61 38511 - 38521 + r 70 -2.4 -4.99134 | TTGTCACTTAATGTG AGCC GGT GGCA TTTTTCATTTGCAGT TERM 62 38876 - 38921 + r 100 -13.7 -3.74693 | opp_overlap 38887 38908, overlap 38880 TTATTTTCACTGACT TATGTGATTAATGCTAATGTA CGCA TACATTAGCATTAATCATGCA TTTAATCCCCTGCGC TERM 63 38880 - 38917 + r 100 -18.9 -2.67981 | opp_overlap 38887 38908, overlap 38876 TTTCACTGACTTATG TGATTAATGCTAATGTA CGCA TACATTAGCATTAATCA TGCATTTAATCCCCT TERM 64 38910 - 38887 - R 77 -11.2 -3.16881 | opp_overlap 38880 38876, overlap 38908 GACTTATGTGATTAA TGCTAATGTA CGCA TACATTAGCA TTAATCATGCATTTA PSLT047 39411 - 38923 - | putative cytoplasmic protein tlpA 39670 - 40785 + | alpha-helical coiled-coil protein PSLT050.1N 41390 - 41806 + | hypothetical protein TERM 65 41824 - 41838 + F 76 -4.3 -4.91712 | TGTGCTGATTATGCC TGATG AATTA CATCA TTTTTCTGACTTGCG TERM 66 41993 - 42008 + G 75 -3.9 -4.93898 | GCTGGCTGGCGACTG CGCTG AAGCAA CGGCG TTTTTCTCGTGATGT PSLT050.2N 41908 - 42429 + | hypothetical protein PSLT051 43402 - 42461 - | putative cytoplasmic protein TERM 67 43056 - 43040 - G 80 -10.9 -3.88232 | opp_overlap 43038 CCCCGTATAGAACAA CACTGGT ATC ACCAGTG GCAGTTTTTTATGCC TERM 68 43432 - 43422 - H 74 -5.4 -4.57569 | opp_overlap 43422 CCATGCTCTGAAAAA TGAC CCG GTCA TAGTATCACAGGCAA TERM 69 43487 - 43502 + H 76 -4.6 -5.0917 | overlap 43489 GAATTGCAATTCCTT CAGGGG CAGT CCCCTC TTTCTTTTTTAATCA TERM 70 43489 - 43500 + H 71 -7.2 -4.15047 | overlap 43487 ATTGCAATTCCTTCA GGGG CAGT CCCC TCTTTCTTTTTTAAT TERM 71 44727 - 44751 + G 75 -7.1 -4.52857 | opp_overlap 44714 44727 AACAGGATGGACACA CCTGCAATCTC ATC GGGAATGTAGG TTTTATGTCCAAAAT parA 43817 - 45022 + | plasmid partition protein A parB 45019 - 45996 + | plasmid partition protein B umuC 47352 - 46078 - | DNA polymerase V subunit UmuC samA 47774 - 47352 - | SamA TERM 72 48046 - 48081 + H 82 -13.2 -2.90904 | gap 1, overlap 48044 CACCCGCTGCCAGTG TGCC-GCGTCCGGCCTG TCA CGGGACGGGCGCTGGCG TCGTTGTGATTGTAC TERM 73 48153 - 48174 + H 74 -10.9 -2.93252 | opp_overlap 48150, overlap 48150 TCGCGGCATAAGCTC GCCGACGAT GAGA ATTGTCGGC TCGTTATTCCACGGT PSLT056 48285 - 48755 + | putative cytoplasmic protein PSLT057 48748 - 49104 + | putative cytoplasmic protein TERM 74 49112 - 49132 + F 72 -10.4 -2.79098 | opp_overlap 49097 49109 49108, overlap 49109 CCCGCTGATAATCTG CCGGGCAG TACGT CTGCCTGG TACTTCCTGAATGAA TERM 75 49227 - 49253 + F 80 -5.6 -4.93296 | overlap 49228 49232 TGTGGTCAGTATCCC GCGTCCGGCCGG GCA CGGGACGGGCGA TTTTTCTGCTCCTGC TERM 76 49228 - 49252 + F 72 -9.1 -3.55254 | overlap 49227 49232 GTGGTCAGTATCCCG CGTCCGGCCGG GCA CGGGACGGGCG ATTTTTCTGCTCCTG TERM 77 49357 - 49343 - f 80 -10 -3.85698 | opp_overlap 49346, overlap 49347 CTTTCGCGGCATAAA CTCACC GAC GGTGAG GACTGTCGGCTCGTT PSLT059 49486 - 50166 + | putative methylase TERM 78 50210 - 50190 - g 70 -3.2 -4.8048 | gap 1, overlap 50192 50202 TCCGGACACGAAAAA CTCCGCGCA GAAG TG-GCGGCG CTGGCCAACAGCATG TERM 79 50242 - 50202 - g 74 -11.2 -3.2964 | overlap 50192 50190 AAACTCCGCGCAGAA GTGGCGGCGCTGGCCA-ACA GCA TGTGCGACCTGCGC-GCCAC CCTGAAAGTGCTGGA PSLT060 50166 - 50387 + | putative cytoplasmic protein TERM 80 50421 - 50403 - f 76 -11.6 -2.67992 | overlap 50395 50400 CAGATGACGAGACCA CGGGCGGC GGT GCCGCCCC ACTGAACCAACGGAG PSLT060.1N 50443 - 50856 + | hypothetical protein PSLT061 50928 - 51692 + | putative inner membrane protein TERM 81 51770 - 51739 - f 79 -8.8 -4.06562 | opp_overlap 51744, overlap 51744 AACGGTAACGAGAAA GAAAAGAGAAGGGG AGGT CTCCTTCTCTTTTT TCAGTTTTTCAGCCG TERM 82 51765 - 51744 - f 91 -8.7 -5.04733 | opp_overlap 51744, overlap 51739 TAACGAGAAAGAAAA GAGAAGGGG AGGT CTCCTTCTC TTTTTTCAGTTTTTC TERM 83 51744 - 51765 + F 100 -10.9 -5.30575 | opp_overlap 51739 51744 TAACGAGAAAGAAAA GAGAAGGGG AGGT CTCCTTCTC TTTTTTCAGTTTTTC TERM 84 52439 - 52464 + G 73 -8.9 -3.84808 | overlap 52458 AAACTGGTTTGATCG TACCGTCAGCG CCGA CGCTGCCGGAA TTATTCTGACTTCGC PSLT062 52188 - 52622 + | putative cytoplasmic protein TERM 85 52623 - 52658 + F 70 -9.6 -2.98014 | gap 1, opp_overlap 52627 52631, overlap 52617 52616 GCCGCGCTCGACTGA TTAACCGACGGGGCGGC GAT GCCGCCCCG-CTGTAAC TGTCATTCATTGATT TERM 86 52654 - 52627 - f 90 -14.8 -3.18264 | gap 1, opp_overlap 52623 52617 52616, overlap 52631 CGCTCGACTGATTAA CCGACGGGGCGGC GAT GCCGCCCCG-CTG TAACTGTCATTCATT TERM 87 52651 - 52631 - f 100 -19.7 -2.57244 | opp_overlap 52623 52617 52616, overlap 52627 CGACTGATTAACCGA CGGGGCGGC GAT GCCGCCCCG CTGTAACTGTCATTC PSLT063 52689 - 53123 + | putative cytoplasmic protein TERM 88 53255 - 53234 - f 100 -11.5 -5.00616 | GCCCGCGCGAAAAAA CCTGCAGGC TGGC GCCTGCGGG GGGAAGGACAGGGGC TERM 89 53261 - 53294 + F 100 -14.5 -4.13014 | gap 1, opp_overlap 53264 53266 CGCCTGCGGGGGGAA GGACAGGG-GCCGCGC TTC GCGCCGCTCCCTGCCC TTTTCCCCCTCTGCC TERM 90 53291 - 53264 - f 81 -13.4 -2.70932 | gap 1, opp_overlap 53261, overlap 53266 CTGCGGGGGGAAGGA CAGGG-GCCGCGC TTC GCGCCGCTCCCTG CCCTTTTCCCCCTCT TERM 91 53288 - 53266 - f 72 -10.4 -2.90075 | opp_overlap 53261, overlap 53264 GCGGGGGGAAGGACA GGGGCCGCGC TTC GCGCCGCTCC CTGCCCTTTTCCCCC PSLT064 53359 - 53682 + | putative inner membrane protein TERM 92 54219 - 54168 - f 75 -9.6 -3.54489 | opp_overlap 54173 54180, overlap 54180 CCAAGGTGAAATGAA CAGCCCACAAAACTTTTTGCCG TAAAAGGC CGGCAAAAACTTTTGCGTTCTG CCCCGGACAGGTGCG TERM 93 54867 - 54847 - g 72 -2.3 -4.88222 | overlap 54848 AGCAAAAGGGAAAAA CGCAGCAGC ACC GCAGCAGCC GCCAGCGCAACCCGA ssbB 54401 - 54919 + | single-strand DNA binding protein TERM 94 54940 - 54956 + F 86 -13.7 -3.28712 | TAAATTTTCACTGAT GCCCCGT CTG ACGGGGC TTATCCAGGAGAACA PSLT067 54974 - 55216 + | putative cytoplasmic protein PSLT068 55285 - 57282 + | putative ParB-like nuclease psiB 57322 - 57756 + | plasmid SOS inhibition protein B psiA 57753 - 58490 + | plasmid SOS inhibition protein A TERM 95 58656 - 58682 + T 77 -10.9 -3.28791 | gap 2, opp_overlap 58654 ACTCAGGAAGTGACC CGGATGGCGGGGA ATA TCCCCGCC--CCG TTATCGAAAGGAGAT TERM 96 58937 - 58956 + T 80 -5.6 -5.08088 | GTGTTAACGGAAATG GCGGTGTC TCCG GTCACTGC TTTTTCTTCAGAATT TERM 97 59654 - 59642 - T 77 -3.3 -5.10033 | GGAAGATAAACAAAA TGACC TGT GGACA ACATATCAGCGTGTA TERM 98 59819 - 59865 + T 100 -30 -3.61894 | opp_overlap 59819 59822 59827 59832, overlap 59822 59832 GAATGTAAGTCATAA TAACATAAGTAAAGCCCCGAAA ATT TTTCGGGGCTTTACTTATGTTA TTCTTCCCGGACATT TERM 99 59865 - 59819 - T 100 -30 -3.43564 | opp_overlap 59819 59822 59832, overlap 59822 59827 59832 GAATGTAAGTCATAA TAACATAAGTAAAGCCCCGAAA ATT TTTCGGGGCTTTACTTATGTTA TTCTTCCCGGACATT TERM 100 59822 - 59862 + T 100 -27.3 -3.9461 | opp_overlap 59819 59822 59827 59832, overlap 59819 59832 TGTAAGTCATAATAA CATAAGTAAAGCCCCGAAA ATT TTTCGGGGCTTTACTTATG TTATTCTTCCCGGAC TERM 101 59862 - 59822 - T 100 -27.3 -3.84808 | opp_overlap 59822 59819 59832, overlap 59819 59827 59832 TGTAAGTCATAATAA CATAAGTAAAGCCCCGAAA ATT TTTCGGGGCTTTACTTATG TTATTCTTCCCGGAC TERM 102 59857 - 59827 - T 100 -21.4 -3.87364 | opp_overlap 59822 59819 59832, overlap 59822 59819 59832 GTCATAATAACATAA GTAAAGCCCCGAAA ATT TTTCGGGGCTTTAC TTATGTTATTCTTCC TERM 103 59852 - 59832 - T 100 -15.5 -4.10731 | opp_overlap 59822 59819 59832, overlap 59827 59822 59819 AATAACATAAGTAAA GCCCCGAAA ATT TTTCGGGGC TTTACTTATGTTATT TERM 104 59832 - 59852 + T 100 -15.5 -4.10731 | opp_overlap 59832 59827 59822 59819, overlap 59822 59819 AATAACATAAGTAAA GCCCCGAAA ATT TTTCGGGGC TTTACTTATGTTATT TERM 105 60132 - 60151 + T 78 -5.6 -4.76478 | overlap 60133 ACAAAAAGGGGATCA TCGGGCGG GAGT CTGCCTGG TTTTACTTTGTTTTA PSLT072 60599 - 60129 - | putative transglycosylase TERM 106 60423 - 60467 + g 100 -20.9 -3.37522 | opp_overlap 60440 TAACCCCGAGCCATA TCCCGTAACCGGATTAATACC GAC GGCATTAGCCCGGTTACGGGA TTCCTTCCATGAAAT TERM 107 60816 - 60786 - H 100 -17.6 -3.794 | TTTTAATGTATTAAA TAGCGGTGCAGGCA CGT CGCCGGCACCGCTA TGACGACGCTATACA TERM 108 60939 - 60914 - H 82 -11.9 -3.33696 | opp_overlap 60916 CCTGTTTTTAAGTAA CACCCCTGG GGGCGCTG CCAGGGGTG TTACCCCTTACAGAG traM 61014 - 61394 + | conjugal transfer protein TraM TERM 109 61559 - 61522 - f 77 -9.1 -3.96481 | overlap 61523 AAAAAACAAGTTAAA TCGCCGATACAGGGAGC TGTC ACTCCCTGCATCGACTG TCCATAGAATCCTTT TERM 110 61558 - 61523 - f 80 -12.6 -2.95449 | overlap 61522 AAAAACAAGTTAAAT CGCCGATACAGGGAGC TGTC ACTCCCTGCATCGACT GTCCATAGAATCCTT traJ 61587 - 62273 + | regulatory protein TERM 111 62287 - 62304 + G 100 -9.1 -6.10489 | opp_overlap 62286 GAATGTTAATTAAGG CGCGCCA TTTT TGGCGTG TTTTTTTTTGCCGTT traY 62274 - 62594 + | DNA-binding protein traA 62636 - 62998 + | conjugal transfer pilin subunit TraA traL 63013 - 63324 + | conjugal transfer pilus assembly protein TraL traE 63346 - 63912 + | conjugal transfer pilus assembly protein TraE traK 63899 - 64639 + | conjugal transfer protein TraK traB 64639 - 66060 + | conjugal transfer pilus assembly protein TraB traP 66050 - 66646 + | conjugal transfer protein TraP TERM 112 66748 - 66721 - g 77 -4.2 -4.91511 | gap 1, opp_overlap 66721 66727, overlap 66724 ACTGCACTACAAAAA TAATACTCTCCGG TCG CCGG-GAATATAA TTTCTCACGACAGGA TERM 113 66745 - 66724 - g 75 -5.9 -4.56153 | gap 1, opp_overlap 66721 66727, overlap 66721 GCACTACAAAAATAA TACTCTCCGG TCG CCGG-GAATA TAATTTCTCACGACA trbD 66624 - 66869 + | conjugal transfer protein TrbD TERM 114 67062 - 67033 - g 70 -9.1 -3.63805 | opp_overlap 67026 ACCTGAGACGGTAAA GCCGGGTGCGGTA TCAC TGCCGCGCCTGGC TGAGGGTAACTTTCG traV 66866 - 67381 + | conjugal transfer protein TraV TERM 115 67421 - 67401 - f 72 -10.3 -2.91264 | opp_overlap 67401 67404, overlap 67404 CGCGTCAGTCAGATA TCAGCCGGC AAT GCCGGCCGG CTTTCTGTATTCAAA TERM 116 67401 - 67421 + F 74 -10.3 -3.11962 | opp_overlap 67401 67404, overlap 67404 CGCGTCAGTCAGATA TCAGCCGGC AAT GCCGGCCGG CTTTCTGTATTCAAA TERM 117 67418 - 67404 - f 78 -12.8 -2.7035 | opp_overlap 67401 67404, overlap 67401 GTCAGTCAGATATCA GCCGGC AAT GCCGGC CGGCTTTCTGTATTC TERM 118 67404 - 67422 + F 83 -8.8 -4.2074 | opp_overlap 67404 67401, overlap 67401 GTCAGTCAGATATCA GCCGGC AATGCCG GCCGGC TTTCTGTATTCAAAA TERM 119 67620 - 67594 - g 71 -8.1 -3.91144 | opp_overlap 67599, overlap 67599 CGGATACGGCAGAAA GTAAACCGTAA AGGTA TTCCGGTTTAC CGGTGTGAAGCATGC traR 67516 - 67737 + | conjugal transfer protein TraR PSLT087 67730 - 68197 + | OrfG2 TERM 120 68216 - 68228 + F 70 -4.7 -4.49981 | overlap 68217 TTTATCTGCAGCGTT ACGGC GTG GCCGG TTTTCTCCTGGTGTA traC 68593 - 71241 + | conjugal transfer ATP-binding protein TraC TERM 121 71431 - 71417 - g 78 -2.1 -5.24129 | gap 1 GCCGGCCAGAAAAAA CTGACG GAAG CG-CAG TCGAAAGCGTTGTCC trbI 71216 - 71602 + | conjugal transfer protein TrbI traW 71599 - 72231 + | conjugal transfer pilus assembly protein TraW TERM 122 72435 - 72453 + G 71 -4.4 -4.59773 | overlap 72440 ATGCCGCTCCAGTTC TGTCCGGC GCC GCCGCCCA TTTTTAAGCGTCCCG traU 72228 - 73220 + | conjugal transfer pilus assembly protein TraU PSLT093 73239 - 73547 + | OrfF trbC 73532 - 74170 + | conjugal transfer pilus assembly protein TrbC TERM 123 74182 - 74162 - f 73 -7.5 -4.03234 | overlap 74173 GGTGCCGGAGATAAA CCGCAATGA CAT TCCCTGCGG AATAAACAGCAGGAA TERM 124 74503 - 74492 - g 73 -5.8 -4.39426 | GAGATGTTCAGAAAA CAGG TCTC CCTG CAGGTTGAGCGGGGG PSLT094.1N 74207 - 74626 + | hypothetical protein TERM 125 76103 - 76090 - g 70 -3.1 -4.75372 | AGTAGTGACGAAAAA GCTCT GGCC AAAGC AAAAACGAACAAACT TERM 126 76127 - 76117 - g 70 -5.4 -4.50686 | GCAAAAACGAACAAA CTGA CGG TCAG TGTCGGGGAATTCTG traN 74623 - 76449 + | conjugal transfer mating pair stabilization protein TraN trbE 76460 - 76675 + | conjugal transfer protein TrbE TERM 127 77006 - 76996 - g 86 -6.8 -5.03715 | ATGAGCGCCAAAAAA GCCA TGC TGGC GCATCCTGAACTGGA traF 76687 - 77436 + | conjugal pilus assembly protein TraF TERM 128 77650 - 77632 - f 83 -9.6 -4.06993 | overlap 77635 GCATATATTAAATAA CAATGGAG TGA CTCCACTG TGCGTAAATATAAAT TERM 129 77647 - 77635 - f 73 -7.7 -4.1421 | overlap 77632 TATATTAAATAACAA TGGAG TGA CTCCA CTGTGCGTAAATATA traQ 77650 - 77943 + | conjugal transfer pilin chaperone TraQ TERM 130 78092 - 78106 + G 73 -9.2 -3.83026 | opp_overlap 78091, overlap 78091 GTGCAGAAAGTAACG CCGGCG CCC CGCTGG TTTCGTCTCAGCAAC trbB 77930 - 78478 + | conjugal transfer protein TrbB TERM 131 79548 - 79509 - g 74 -10.8 -3.53091 | gap 1, opp_overlap 79508 79510, overlap 79511 79512 ATCCCGGTTTTCAAA TACCTGGTTGACCCGCAGA TGC TCGGCGTGTCAACCA-GCA TGATTTATCAGCTGA TERM 132 79547 - 79511 - g 88 -13.7 -3.34398 | opp_overlap 79510 79508, overlap 79509 79512 CCCGGTTTTCAAATA CCTGGTTGACCCGCAGA TGC TCGGCGTGTCAACCAGC ATGATTTATCAGCTG TERM 133 79546 - 79512 - g 90 -17.2 -2.60496 | opp_overlap 79510 79508, overlap 79511 79509 CCGGTTTTCAAATAC CTGGTTGACCCGCAGA TGC TCGGCGTGTCAACCAG CATGATTTATCAGCT traH 78468 - 79850 + | conjugal transfer pilus assembly protein TraH TERM 134 80912 - 80900 - g 74 -7.7 -4.15044 | GCTGTCTTTAATAAA CTGAC GCT GTCAG TGCTGAAAGGGTATG TERM 135 81136 - 81152 + G 81 -12.3 -3.54935 | GGTAAAAGGTCTGGG CGCTGGA TTT TCCAGCG TTTACAGCCACTTTG traG 79847 - 82669 + | conjugal transfer mating pair stabilization protein TraG traS 82685 - 83179 + | entry exclusion protein traT 83215 - 83946 + | conjugal transfer surface exclusion protein TraT TERM 136 84831 - 84818 - g 77 -3.8 -5.06103 | overlap 84820 AGAATGCTGAAAAAA GACG GAAAAG CGTC CGATATCCTGATTGG TERM 137 86330 - 86306 - g 90 -5 -5.28176 | gap 1, overlap 86309 86310 GTCAGCGATAAAAAA TCAGCAGCGGC GGGT ACCGCCG-TGA ATACGCCTGCAGGCG traD 84323 - 86566 + | conjugal transfer protein TraD PSLT106 86973 - 86575 - | plasmid maintenance protein TERM 138 86714 - 86686 - Gg 91 -14.5 -3.07291 | opp_overlap 86709 AATCATCTGATCGAA TGGCCCGACAGGG CGT CCCTGACGGGCAA GCTCTGCCCTGATCT TERM 139 86870 - 86844 - Gg 74 -10.2 -3.53012 | opp_overlap 86839 TTTCGGCGCCGTAAA TCAGCTCCATCA GGG TGACCGAGCTGA TACACATTCTCCCCT TERM 140 86905 - 86919 + Gg 90 -5.6 -5.1471 | CAGGTTAAAACGCTC CCTGAC GCT GGCAGG TTTGTTTTTTATCGT PSLT107 87203 - 86973 - | putative cytoplasmic protein trbH 86566 - 87285 + | conjugative transfer protein TERM 141 87608 - 87582 - g 80 -10.8 -3.85698 | CTGGCCGGTGATAAA CGCCTGACTGAG GCA CACAACCAGGCG GTGGATATCGCTGTC TERM 142 88321 - 88335 + G 76 -12.8 -2.70932 | opp_overlap 88306 CGGTCGGCATGCTGC CGCCGG AAG CCGGCG TGATTGAGAAAGCCC TERM 143 89018 - 89035 + G 75 -6.9 -4.42653 | overlap 89020 CCGGAATGTCCGCTA TGCCCGG CTGG CCGGGGA TTTTGTGGCTGCGGT TERM 144 89281 - 89268 - g 71 -8.1 -3.89614 | opp_overlap 89267 TGGAACCCGGAGAAA CGGTC CCAT GACCG GTATGTGATTGACCG TERM 145 89931 - 89915 - g 77 -3.6 -4.98531 | GGTGGAAAGTAAAAA CCTGGC ATTCA GTCAGG TGGACCTGCTGACGG TERM 146 90879 - 90869 - g 72 -2.4 -4.84359 | GGAGGCGGAGAAAAA GGGC GAA GCCT TTCCGGATGTGCCCG TERM 147 91224 - 91202 - g 100 -16.4 -3.03441 | opp_overlap 91202 91205, overlap 91205 GATTACCCTGGAAGA TAAGGCGGGT AAC ACCCGCCTTA TTTCCCCCCGGGAAG TERM 148 91202 - 91224 + G 100 -16.4 -3.53012 | opp_overlap 91202 91205, overlap 91205 GATTACCCTGGAAGA TAAGGCGGGT AAC ACCCGCCTTA TTTCCCCCCGGGAAG TERM 149 91221 - 91205 - g 89 -13.7 -3.66288 | opp_overlap 91202 91205, overlap 91202 TACCCTGGAAGATAA GGCGGGT AAC ACCCGCC TTATTTCCCCCCGGG TERM 150 91205 - 91221 + G 93 -13.7 -3.90744 | opp_overlap 91205 91202, overlap 91202 TACCCTGGAAGATAA GGCGGGT AAC ACCCGCC TTATTTCCCCCCGGG TERM 151 91668 - 91658 - g 81 -8.2 -4.2558 | overlap 91659 CAGTGCGGAGCAAAA GGGC ACG GCCC ATGACGTGCTGGAGC TERM 152 92331 - 92320 - g 79 -7.2 -4.46212 | TGCCGGAGGAGAAAA CCGC GCAG GCGG TCAGGGAGATTGCCG traI 87282 - 92540 + | conjugal transfer nickase/helicase TraI TERM 153 92535 - 92524 - f 82 -7.2 -4.84918 | TGCAGAAAGAGAAAA CCCC TGGC GGGG ACTGATACGGGAAGA TERM 154 93005 - 93049 + G 72 -11.4 -3.07522 | gap 1, opp_overlap 93017, overlap 93008 CGGCGTGGATACCCC TGTCCGGAACCAGCTACGGCG TTGC CGGCGT-GCTGGTGCTGGTCA TCTGTTACCGGCTGT TERM 155 93008 - 93046 + G 72 -11.7 -2.7535 | gap 1, opp_overlap 93017, overlap 93005 CGTGGATACCCCTGT CCGGAACCAGCTACGGCG TTGC CGGCGT-GCTGGTGCTGG TCATCTGTTACCGGC traX 92560 - 93300 + | conjugal transfer pilus acetylation protein TraX finO 93355 - 93918 + | conjugal transfer fertility inhibition protein FinO