TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.508988 %AT, 4003143 nt, 32419 terms. Intergenic: 0.583861 %AT, H2T: 470211 nt, 4554 terms; T2T: 141998 nt, 3607 terms; H2H: 205828 nt, 3196 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|113951722|ref|NC_008320.1| Shewanella sp. MR-7 plasmid1, complete sequence (length 6499) Shewmr7_4036 912 - 1604 + | initiator RepB protein TERM 1 1608 - 1594 - f 75 -7.2 -4.32804 | ACAAGCAACTGAAAA TGGATT TAT AATCCA GCTGCAACACATGCA TERM 2 1924 - 1911 - g 73 -5.3 -4.68479 | ATAAAAGAACTAAAA TCAGA ACAA TCTGA GATGAAAGAAATCAT Shewmr7_4037 1638 - 2108 + | hypothetical protein Shewmr7_4038 2582 - 2121 - | hypothetical protein Shewmr7_4039 2859 - 2584 - | hypothetical protein TERM 3 3224 - 3194 - R 100 -13.4 -3.53811 | opp_overlap 3192, overlap 3195 TTTACTGCCGCTAAA TGTGAGGTGTTGAT ATC ACCAACACCTCACC ACATTACCTAGCGCT TERM 4 3223 - 3195 - R 100 -16.9 -2.72144 | opp_overlap 3192, overlap 3194 TTACTGCCGCTAAAT GTGAGGTGTTGAT ATC ACCAACACCTCAC CACATTACCTAGCGC TERM 5 3456 - 3439 - R 71 -9.9 -2.6356 | overlap 3386 3438 ACTTAGAGTTAGAAG TGCGGAA CAGT TTCCGCA TAAACTGCTCGATCC TERM 6 3483 - 3503 + r 73 -9.1 -3.54424 | overlap 3465 ATCCCAGTTTTGGGG GTGAATGTT CTT AGCATTCAC TTTCCAAAACTGCGC TERM 7 3654 - 3641 - R 82 -3.1 -5.42259 | TCATCTCTAAAAAAA CACCA CATA TAGTG TTATCGTTATAAAAA TERM 8 3705 - 3740 + r 100 -17.8 -3.494 | opp_overlap 3713, overlap 3713 ATTTTTGCTCTATAA ATGAAAAAGCCGACCA TTAT TGGTCGGCTTTTTCAC TTCTATGCCACCTTC TERM 9 3732 - 3713 - R 100 -13.6 -5.04601 | opp_overlap 3713 3705 TCTATAAATGAAAAA GCCGACCA TTAT TGGTCGGC TTTTTCACTTCTATG TERM 10 3713 - 3732 + r 100 -13.6 -4.79756 | opp_overlap 3713, overlap 3705 TCTATAAATGAAAAA GCCGACCA TTAT TGGTCGGC TTTTTCACTTCTATG Shewmr7_4040 4039 - 3743 - | XRE family plasmid maintenance system antidote protein Shewmr7_4041 4394 - 4089 - | plasmid maintenance system killer TERM 11 4417 - 4436 + r 78 -9.3 -3.71794 | opp_overlap 4417 4416 4414 CCCTTGAAAAACCAT CCACCCA CATCTT TGGGTGG TTTCGATAATTAAAT Shewmr7_4042 5255 - 4956 - | hypothetical protein TERM 12 5170 - 5196 + g 70 -2.1 -5.05712 | overlap 5174 5177 TTGGTTTTGCGTCCC GCACCAGGGCG AGCGC CGCCATGTTGG TTTTTGCTTGTTTCT Shewmr7_4043 6317 - 5454 - | putative integrase TERM 13 5581 - 5602 + g 75 -10.9 -3.34895 | gap 1, opp_overlap 5583 CGCTCCAAGCCACCA CAGGCCG-CA CAT TGACGGCCTG TTAGTTCCAAATAAC SEQUENCE gi|114045513|ref|NC_008322.1| Shewanella sp. MR-7, complete genome (length 4792610) dnaA 81 - 1463 + | chromosomal replication initiation protein Shewmr7_0002 1484 - 2584 + | DNA polymerase III, beta subunit TERM 1 2609 - 2630 + F 100 -14.5 -3.09452 | overlap 2611 GCCTACTTTGTGCCA TACGCCGCT TTTT AGCGGCGTA TATGTCTTCAAGCCT TERM 2 2611 - 2628 + F 93 -12.7 -3.10493 | overlap 2609 CTACTTTGTGCCATA CGCCGCT TTTT AGCGGCG TATATGTCTTCAAGC Shewmr7_0003 2747 - 3829 + | DNA replication and repair protein RecF Shewmr7_0004 3846 - 6263 + | DNA gyrase subunit B TERM 3 6308 - 6326 + T 100 -13.2 -5.38326 | opp_overlap 6308 GCGATTGATAAGAAA GGGAAAGC TTA GCTTTCCC TTTTTGTTTGGTTGA TERM 4 6326 - 6308 - T 100 -13.2 -4.33417 | opp_overlap 6308 GCGATTGATAAGAAA GGGAAAGC TTA GCTTTCCC TTTTTGTTTGGTTGA Shewmr7_0005 7001 - 6345 - | glutathione S-transferase domain-containing protein TERM 5 6712 - 6731 + g 82 -3.5 -5.28942 | GAATGCATTTCACAG GCGAAGG AGCGAG CCTTAGC TTTTTGTTTCGGGTC TERM 6 7282 - 7264 - g 76 -6 -4.59511 | overlap 7266 AAGAGCTGGGAAAAA CGCTCTTT GTA AAAGAGGG GCGAAACTTAGTCTT Shewmr7_0006 7128 - 7976 + | LysR family transcriptional regulator Shewmr7_0007 8132 - 9175 + | putative signal transduction protein TERM 7 9218 - 9190 - T 100 -17.7 -3.37053 | opp_overlap 9197, overlap 9197 ATATATTGCAACCAA TAAAAAACGCGCT AAA AGCGCGTTTTTTA TTGGCACTCTAACGT TERM 8 9211 - 9197 - T 100 -11.4 -5.5604 | opp_overlap 9197, overlap 9190 GCAACCAATAAAAAA CGCGCT AAA AGCGCG TTTTTTATTGGCACT TERM 9 9197 - 9211 + T 100 -11.4 -5.45652 | opp_overlap 9197 9190 GCAACCAATAAAAAA CGCGCT AAA AGCGCG TTTTTTATTGGCACT glyS 11305 - 9239 - | glycyl-tRNA synthetase subunit beta glyQ 12220 - 11315 - | glycyl-tRNA synthetase subunit alpha TERM 10 12811 - 12825 + G 71 -5 -4.4522 | overlap 12813 AGCTCGGCTTTAACT TTGTTG GCC CAACGA TTTGTTATGCTTTTA Shewmr7_0010 12339 - 12914 + | DNA-3-methyladenine glycosylase I TERM 11 12947 - 12980 + T 100 -15.5 -3.98291 | opp_overlap 12952, overlap 12952 GCTAACATCCAAAAT AAAAAGGCATGTTCC ACGT GGAACATGCCTTTTG TTATTTCACCTTGTT TERM 12 12952 - 12975 + T 100 -15.4 -5.00196 | opp_overlap 12952, overlap 12947 CATCCAAAATAAAAA GGCATGTTCC ACGT GGAACATGCC TTTTGTTATTTCACC TERM 13 12975 - 12952 - T 100 -15.4 -5.48213 | opp_overlap 12952 12947 CATCCAAAATAAAAA GGCATGTTCC ACGT GGAACATGCC TTTTGTTATTTCACC Shewmr7_0011 16188 - 13000 - | amidohydrolase TERM 14 13533 - 13559 + g 70 -8.8 -3.64822 | CGCCGTAGGCGACGA CTAAGGTTGG AGTGTAA CCGACCTTAG TTTGGCTCCAGAACT TERM 15 14659 - 14646 - G 70 -2.3 -4.99043 | TGTTCATAAAGAAAA TGCGG TCTG CCGAA GCTCCGAATTGTGCT Shewmr7_0012 16822 - 16385 - | hypothetical protein TERM 16 16853 - 16867 + r 71 -4.2 -4.89009 | overlap 16855 CCTAATGTCGATGCA GAGACT TAG AGTCCC TTTTTAATTAGATAT Shewmr7_0013 17103 - 16858 - | SirA family protein TERM 17 17255 - 17240 - R 70 -7.6 -3.71527 | TCGTAACCATCGAAA TGTTCC ACGT GGAACA ACATCATTATTCGGC Shewmr7_0014 18455 - 17262 - | diguanylate cyclase TERM 18 17414 - 17425 + g 76 -3 -5.16237 | CTGCTCGTGCGCGTT TGTA GCTA TACA TTTTTTGATCGGCTT TERM 19 18665 - 18648 - R 100 -8.4 -5.68489 | opp_overlap 18648 GAGAACAATAAAAAA GCCGGA ACTGAG TCCGGC TTTTAAAGAGTGGGG TERM 20 18648 - 18665 + r 79 -8.4 -4.09685 | opp_overlap 18648 GAGAACAATAAAAAA GCCGGA ACTGAG TCCGGC TTTTAAAGAGTGGGG fadA 19852 - 18689 - | 3-ketoacyl-CoA thiolase fadB 22025 - 19875 - | multifunctional fatty acid oxidation complex subunit alpha TERM 21 20155 - 20165 + g 73 -5.4 -4.72272 | overlap 20150 GCGATGATTTCATCC GCAT CGA ATGC TTTTTGCTCACCAAA TERM 22 21225 - 21245 + g 77 -10.3 -3.65224 | overlap 21222 AATTTGCAGTGCGTC GCTGCGGCC TTT GGTCGCCGC TTGTTCAACTACGCT TERM 23 21388 - 21402 + g 71 -5.7 -4.38712 | TTACGGTGGCGACGG GCTTG CCAAT CAAGC TTTTCTGCAACTGCA Shewmr7_0017 22469 - 23788 + | proline dipeptidase TERM 24 23844 - 23884 + G 86 -12.3 -3.90112 | gap 1, opp_overlap 23852, overlap 23852 GTGAAAATGTGCAGA TAGAAGAAGAGATAAAGC ATAGCC GCTTTATCTCTT-TTCTA TTTCATTGCACGAGC TERM 25 23852 - 23877 + G 100 -10.6 -4.84539 | opp_overlap 23852, overlap 23844 GTGCAGATAGAAGAA GAGATAAAGC ATAGCC GCTTTATCTC TTTTCTATTTCATTG TERM 26 23877 - 23852 - g 84 -11.3 -3.92996 | opp_overlap 23852 23844 GTGCAGATAGAAGAA GAGATAAAGCA TAGC CGCTTTATCTC TTTTCTATTTCATTG Shewmr7_0018 23804 - 24418 + | hypothetical protein Shewmr7_0019 24496 - 25953 + | TrkH family potassium uptake protein TERM 27 26038 - 26022 - g 90 -8.7 -4.67038 | GCCGCAAAATCAAAA CGCTTGC CGA ACAAGCG GGTGAGCAGGTGTCG Shewmr7_0020 25955 - 26479 + | protoporphyrinogen oxidase TERM 28 26516 - 26483 - T 79 -6.8 -4.62872 | opp_overlap 26486 26490, overlap 26484 26486 26490 AGCAAGCTGTAAAAA TGATAAAGCCCTAG TCTCAG CTAGGGCTTTATTG TTACTGCATGGCACG TERM 29 26515 - 26484 - T 78 -10.3 -3.37 | opp_overlap 26486 26490, overlap 26483 26486 26490 GCAAGCTGTAAAAAT GATAAAGCCCTAG TCTCAG CTAGGGCTTTATT GTTACTGCATGGCAC TERM 30 26486 - 26513 + T 100 -13.6 -3.73647 | opp_overlap 26484 26483 26486 26490, overlap 26490 AAGCTGTAAAAATGA TAAAGCCCTAGT CTCA GCTAGGGCTTTA TTGTTACTGCATGGC TERM 31 26513 - 26486 - T 100 -12.9 -3.24823 | opp_overlap 26486 26490, overlap 26484 26483 26490 AAGCTGTAAAAATGA TAAAGCCCTAG TCTCAG CTAGGGCTTTA TTGTTACTGCATGGC TERM 32 26490 - 26509 + T 100 -10 -4.48713 | opp_overlap 26486 26484 26483 26490, overlap 26486 TGTAAAAATGATAAA GCCCTAGT CTCA GCTAGGGC TTTATTGTTACTGCA TERM 33 26509 - 26490 - T 88 -9.3 -4.2687 | opp_overlap 26490 26486, overlap 26486 26484 26483 TGTAAAAATGATAAA GCCCTAG TCTCAG CTAGGGC TTTATTGTTACTGCA Shewmr7_0021 26850 - 26542 - | ArsR family transcriptional regulator Shewmr7_0022 27049 - 27603 + | protoporphyrinogen oxidase TERM 34 27603 - 27633 + T 100 -14.2 -4.68593 | opp_overlap 27610, overlap 27604 27610 TACTGAGCCCGCCTA ATAAAAATGCGCTC TGT GAGCGCATTTTTAG TTTTTGACTGATACG TERM 35 27604 - 27632 + T 100 -17.7 -3.40674 | opp_overlap 27610, overlap 27603 27610 ACTGAGCCCGCCTAA TAAAAATGCGCTC TGT GAGCGCATTTTTA GTTTTTGACTGATAC TERM 36 27626 - 27610 - T 100 -12.3 -5.06414 | opp_overlap 27604 27603 27610 CCCGCCTAATAAAAA TGCGCTC TGT GAGCGCA TTTTTAGTTTTTGAC TERM 37 27610 - 27626 + T 100 -12.3 -5.18355 | opp_overlap 27610, overlap 27604 27603 CCCGCCTAATAAAAA TGCGCTC TGT GAGCGCA TTTTTAGTTTTTGAC Shewmr7_0023 29092 - 27650 - | TrkH family potassium uptake protein TERM 38 29023 - 28977 - G 84 -11.6 -3.81951 | gap 2 GCCGACAGCATGAAA GCGCCCACGGTTTCCTCGCCGT TGAAC ACGGCAAGG-AGCAG-GGGCGC TAACATAAAGGCTGT trkA 30513 - 29104 - | potassium transporter peripheral membrane component TERM 39 30135 - 30157 + g 73 -3.2 -5.00138 | opp_overlap 30134 30135 30137 30138, overlap 30138 30139 CATCGATCACAAAAC CACCGCGGGG ACG CCCCTCGCTA TTTTTGGTTTCACTG TERM 40 30139 - 30155 + g 71 -7.2 -4.11472 | opp_overlap 30134 30138 30137 30135, overlap 30138 30135 GATCACAAAACCACC GCGGGG ACGCC CCTCGC TATTTTTGGTTTCAC Shewmr7_0025 31818 - 30529 - | sun protein TERM 41 31686 - 31701 + g 74 -6.8 -4.33258 | opp_overlap 31686 TCACGCCGTAGCAGA GCTCTG CGAG CAGGGC TTTATCTTTACCACT Shewmr7_0026 32774 - 31818 - | methionyl-tRNA formyltransferase TERM 42 31888 - 31898 + g 70 -2.4 -5.02074 | TTGAGTATGTCGGCC ACGC TGA GCGG TTTTTTACCGGGTAA TERM 43 32797 - 32813 + r 71 -5 -4.72486 | CCTAATGCTTATTTG GCGTCC TGTCT GGCCGC TTTTTCAAGTTTCTG Shewmr7_0027 33296 - 32790 - | peptide deformylase Shewmr7_0028 33422 - 34546 + | peptidoglycan-binding LysM TERM 44 35313 - 35342 + G 79 -9.3 -4.16016 | overlap 35316 GGTTCCGGGCTCGAT TCTTGGCGGCTTT CATC AAGGCTGCCATGA TTTATTACGGGATGG Shewmr7_0029 34630 - 35646 + | DNA protecting protein DprA Shewmr7_0030 35649 - 36125 + | hypothetical protein TERM 45 36168 - 36154 - f 73 -7.1 -4.14859 | opp_overlap 36154 ATGAATAATGAGAAA GGAGG CTAGC CCTCC TTTTTTGATGCCATA TERM 46 36154 - 36168 + F 90 -7.1 -5.15634 | opp_overlap 36154 ATGAATAATGAGAAA GGAGG CTAGC CCTCC TTTTTTGATGCCATA Shewmr7_0031 36248 - 36811 + | DNA topoisomerase type IA Zn finger domain-containing protein Shewmr7_0032 36950 - 37516 + | translation factor SUA5 Shewmr7_0033 37546 - 38454 + | coproporphyrinogen III oxidase TERM 47 38481 - 38509 + T 93 -13.3 -2.78384 | opp_overlap 38458 38479 38476 38474 AGTATTAATATGAGT CGCGTAATCAGTA CTT TACTGATTACGCA TATGATCAGCCAGAG Shewmr7_0034 38933 - 38496 - | globin Shewmr7_0035 39105 - 39983 + | shikimate 5-dehydrogenase Shewmr7_0036 40004 - 40279 + | hypothetical protein TERM 48 40318 - 40295 - T 100 -13.2 -3.98107 | opp_overlap 40292 40291, overlap 40288 GAGCAAAATGAACAA GATGGCAGCG TAAA CACTGCCATC ACGATTTAATAGAAA Shewmr7_0037 40884 - 40336 - | carbonic anhydrase TERM 49 41163 - 41149 - H 75 -8.6 -3.80893 | ACGCGACAAGGGAAA TGCGTA GAA TACGCA GCCCTGACCCGCTGA TERM 50 41290 - 41268 - H 70 -7.1 -3.76952 | gap 1 TTGAGTTAATCGAAA TTACTCTGCC GTTT GGC-GAGTAA TCAAAATTTAAATCA TERM 51 43157 - 43117 - H 84 -2.7 -5.63374 | opp_overlap 43124 43129 43131 43136, overlap 43131 TTAATACGAAAAAAA TTGAGTTCTTAAAACACTT TTT AAGTGTCTTGAATATTCAA GTCTAAGGCGAGTCC TERM 52 43732 - 43720 - H 83 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 53 44530 - 44514 - H 85 -9.4 -4.08546 | overlap 44527 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 54 44984 - 45012 + H 72 -8.1 -3.85698 | TCCCTAAGCTGACGG CAGTCGCAGATAC CAG GTGGCTGCAACTG TTTATCAAAAACACA TERM 55 46198 - 46186 - H 72 -6.3 -4.2586 | TTAGACGAATACAAA CACTT AAG AAGTG GCACTCAATACAGCT TERM 56 46598 - 46633 + H 100 -15.6 -2.65339 | opp_overlap 46605, overlap 46605 CTCCGCCAACATTAA GAGATAAGCCTCTGCA GCAA TGCAGAGGCTTTTTTC GTTATGCAGTTTTGT TERM 57 46605 - 46626 + H 100 -14.5 -5.32944 | opp_overlap 46605, overlap 46598 AACATTAAGAGATAA GCCTCTGCA GCAA TGCAGAGGC TTTTTTCGTTATGCA TERM 58 46626 - 46605 - H 100 -14.5 -3.72396 | opp_overlap 46605 46598 AACATTAAGAGATAA GCCTCTGCA GCAA TGCAGAGGC TTTTTTCGTTATGCA Shewmr7_0038 46906 - 47160 + | hypothetical protein Shewmr7_0039 47182 - 47637 + | BadM/Rrf2 family transcriptional regulator Shewmr7_0040 48367 - 47612 - | protein of unknown function DUF610, YibQ Shewmr7_0041 49585 - 48380 - | C-terminal processing peptidase-3 TERM 59 48658 - 48668 + g 71 -6.8 -4.25104 | overlap 48641 TTTCACCGAGCAGCT TGGC GCG GCCA TTTTCCTGCAGGGCG TERM 60 48864 - 48836 - G 71 -5.4 -4.56597 | gap 1, overlap 48838 GCCCTTCGCTAAAAA CAGATC-GGCAAT TTTG ATTGCCTGATCCA GCAAGCCGCCGGGAT TERM 61 48862 - 48838 - G 72 -8 -3.90048 | gap 1, overlap 48836 CCTTCGCTAAAAACA GATC-GGCAAT TTTG ATTGCCTGATC CAGCAAGCCGCCGGG Shewmr7_0042 50767 - 49634 - | peptidase M23B TERM 62 50747 - 50722 - G 86 -14.9 -2.88737 | opp_overlap 50726, overlap 50726 AGAAAGATAACATCA TAAAGCCAGCA ATAA TGCTGGCTTTA ACGGGGAGTCGAGTG TERM 63 50743 - 50726 - G 86 -11.3 -4.09173 | opp_overlap 50726, overlap 50722 AGATAACATCATAAA GCCAGCA ATAA TGCTGGC TTTAACGGGGAGTCG TERM 64 50726 - 50743 + g 79 -11.3 -3.53444 | opp_overlap 50726 50722 AGATAACATCATAAA GCCAGCA ATAA TGCTGGC TTTAACGGGGAGTCG Shewmr7_0043 52322 - 50778 - | phosphoglyceromutase Shewmr7_0044 52588 - 53022 + | rhodanese domain-containing protein TERM 65 53558 - 53583 + G 100 -16.3 -3.08464 | TCTCAATCGCAGGTC TGAGTGAGCCA CAAC TGGCTCACTCA TTAGGTGCATACTGC Shewmr7_0045 53284 - 53769 + | preprotein translocase subunit SecB gpsA 53774 - 54790 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 66 54842 - 54824 - f 100 -8.8 -4.87892 | opp_overlap 54824 GCTGAATAAAATAAA GGGTGCTA AAA TAGCGCCC TTTTTTATGTCCGAT TERM 67 54824 - 54842 + F 100 -11 -5.37043 | opp_overlap 54824 GCTGAATAAAATAAA GGGTGCTA AAA TAGCGCCC TTTTTTATGTCCGAT TERM 68 55646 - 55636 - g 73 -5.4 -4.69326 | ACAGCGAAGATAAAA TTCG CTT CGAA CCGTTGTCGGGCATT TERM 69 56067 - 56025 - g 71 -10.6 -3.08173 | gap 1 ATGAATGGCACCGAA GGCTATC-GCACCGCCGAG GTCACT CTCGGCGGCGTAGATACCC ATGAACTGTCTTCCA Shewmr7_0047 55029 - 56213 + | hypothetical protein Shewmr7_0048 59131 - 56438 - | tetratricopeptide domain-containing protein TERM 70 58207 - 58219 + g 83 -3.4 -5.44721 | TCGCTCTTTGCTCTC TCTC TTCTT GAGA TTTTTTTAGCATACT Shewmr7_0049 60782 - 59421 - | TrkH family potassium uptake protein TERM 71 60290 - 60275 - G 75 -10.4 -3.48506 | overlap 60273 AGAACCCATGAAACA GGCTGG TTTG CCAGCC CAACTCGCCGCTCCA TERM 72 60719 - 60709 - G 86 -8.2 -4.69326 | ACACTTAAGATAAAA GGCG GCG CGCC AAAGAGTTTTTTACC Shewmr7_0050 61482 - 60784 - | TrkA domain-containing protein Shewmr7_0051 62216 - 61527 - | two component transcriptional regulator TERM 73 61933 - 61951 + g 80 -2.3 -5.52023 | overlap 61931 61934 AGATAATCGTTAGCA CCTGCCT CTAGC AGGCGGA TTTTTTCTTCCTCCT Shewmr7_0052 63263 - 62217 - | periplasmic sensor signal transduction histidine kinase Shewmr7_0053 64414 - 63491 - | pirin domain-containing protein TERM 74 66512 - 66536 + G 70 -2.7 -4.86731 | opp_overlap 66518 GTTACAGCTTAAACG GCTAAATCCGG GGA CCGAAGTCAGC TTTTATTTACCAGAA Shewmr7_0054 64899 - 66572 + | signal transduction histidine kinase, LytS TERM 75 67123 - 67135 + G 76 -6.2 -4.74103 | GTTTGTCAGCCGCTT GCCC GCCGA GGGC TTTTTCCGTTGCCAC Shewmr7_0055 66566 - 67297 + | response regulator receiver protein Shewmr7_0056 67405 - 68649 + | major facilitator transporter TERM 76 68719 - 68686 - T 100 -13.3 -3.6707 | opp_overlap 68691 68692, overlap 68692 AGCCAAGAGCTCAAA CAAAAATCCGCAGCC AAAT AGCTGCGGACTTTTA ATGTCAATTGAAGTG TERM 77 68691 - 68714 + T 79 -8.1 -4.36931 | opp_overlap 68686 68692, overlap 68692 AGAGCTCAAACAAAA ATCCGCAGC CAAATA GCTGCGGAC TTTTAATGTCAATTG TERM 78 68692 - 68713 + T 84 -11.6 -3.21436 | opp_overlap 68692 68686, overlap 68691 GAGCTCAAACAAAAA TCCGCAGC CAAATA GCTGCGGA CTTTTAATGTCAATT TERM 79 68713 - 68692 - T 100 -12.3 -5.28942 | opp_overlap 68691 68692, overlap 68686 GAGCTCAAACAAAAA TCCGCAGCC AAAT AGCTGCGGA CTTTTAATGTCAATT Shewmr7_0057 69359 - 68739 - | hypothetical protein TERM 80 69691 - 69711 + H 84 -9.9 -3.8709 | GTTTTTGAGCTCTGA GATTTTTAG TAG CTAAAAATC TTTGTAGAAGCATTT TERM 81 69917 - 69947 + G 76 -8.2 -4.13805 | opp_overlap 69909 69920, overlap 69918 69920 GCCATAAGCCCGGCA ACAGCGGCGGCAAT CAT GTTGCCACTGCTGA TTTATATGGATTTTT TERM 82 69918 - 69946 + G 77 -11.7 -3.06656 | opp_overlap 69909 69920, overlap 69917 69920 CCATAAGCCCGGCAA CAGCGGCGGCAAT CAT GTTGCCACTGCTG ATTTATATGGATTTT Shewmr7_0058 69785 - 70522 + | hypothetical protein TERM 83 70664 - 70707 + G 71 -11.1 -2.78463 | gap 1 CTGATAGTTATCTTA GCCTTAGGTCTTGGCGC-CT GTGCG AGCGCGCCAGAACCTAAGCC TGTGGTGAAGCAAGT Shewmr7_0059 70622 - 71101 + | NLP/P60 protein Shewmr7_0060 71126 - 72574 + | major facilitator transporter Shewmr7_0061 72663 - 73691 + | LacI family transcription regulator TERM 84 73710 - 73736 + T 100 -15.3 -5.08088 | opp_overlap 73715, overlap 73715 AATGAGTTTTATATG CAAAAGGCGCT AATTA AGCGCCTTTTG TTTTTGTTCGGCATT TERM 85 73715 - 73731 + T 100 -9.4 -5.42605 | opp_overlap 73715, overlap 73710 GTTTTATATGCAAAA GGCGCT AATTA AGCGCC TTTTGTTTTTGTTCG TERM 86 73731 - 73715 - T 85 -9.4 -4.2349 | opp_overlap 73715 73710 GTTTTATATGCAAAA GGCGCT AATTA AGCGCC TTTTGTTTTTGTTCG Shewmr7_0062 75235 - 73751 - | sucrose phosphorylase TERM 87 75308 - 75321 + H 70 -3.9 -4.78848 | opp_overlap 75308 AATTGCACAAACAAA CTTAA TCGA TTAAG TTTTATATTTAACCA TERM 88 76516 - 76529 + G 70 -2.3 -5.01732 | AGCACGGCTCTGTGG CTGGA GTTA TCCTG TTTTTTACCGCGGTT TERM 89 76625 - 76635 + G 74 -4.6 -4.79955 | overlap 76617 CTTTTACCTCGCAAC CGGG TTT TCCG TTTTGTTGTGCCTGT Shewmr7_0063 75492 - 76712 + | major facilitator transporter TERM 90 76720 - 76746 + F 100 -15.4 -5.17576 | opp_overlap 76720 CCGCTTGAATTGAAA TGTGACAGAAAA ATT TTTTCTGTCACA TTTTTTCGATTAATC TERM 91 76746 - 76720 - f 100 -15.4 -3.75153 | opp_overlap 76720 CCGCTTGAATTGAAA TGTGACAGAAAA ATT TTTTCTGTCACA TTTTTTCGATTAATC Shewmr7_0064 76972 - 79368 + | TonB-dependent receptor TERM 92 79402 - 79430 + F 75 -9 -3.60792 | opp_overlap 79407 79408, overlap 79408 TTAAAACCAACAATT TAAAAGGCCCAT CAAGC ATGGGCTTTTTG TTTAACCATTAGAGA TERM 93 79408 - 79424 + F 100 -8 -5.27938 | opp_overlap 79408 79407, overlap 79402 CCAACAATTTAAAAG GCCCAT CAAGC ATGGGC TTTTTGTTTAACCAT TERM 94 79560 - 79540 - g 70 -11.1 -2.56715 | opp_overlap 79528 AGTCCCATCAAGCCA TTGCGGGCG GCG CGCCTGCAA ACGTGGCTGTGGGTT TERM 95 80215 - 80199 - g 74 -7.9 -4.13995 | GTCCCACAAATTAAA GCCGTTG ATA CCACGGC GGCGGGCGACAGCTT Shewmr7_0065 79461 - 80420 + | ribokinase-like domain-containing protein TERM 96 80441 - 80468 + F 89 -7 -5.41143 | CCTGCAAACCATCAA GCTGAGGTGAGT GATT GCTTGCCTTAGC TTTTTTTCGAGCCTA mogA 80626 - 81159 + | molybdenum cofactor biosynthesis protein TERM 97 81186 - 81202 + T 100 -12.3 -5.5074 | opp_overlap 81186 GCAATATGACATAAA CCCAAGC CTA GCTTGGG TTTTTTATTGGCTTG TERM 98 81202 - 81186 - T 100 -12.3 -4.13591 | opp_overlap 81186 GCAATATGACATAAA CCCAAGC CTA GCTTGGG TTTTTTATTGGCTTG Shewmr7_0067 81414 - 81193 - | hypothetical protein Shewmr7_0068 81566 - 82609 + | transcriptional regulator Shewmr7_0069 82873 - 82613 - | hypothetical protein TERM 99 82885 - 82917 + r 81 -11.3 -2.80074 | opp_overlap 82894, overlap 82883 82881 CCATAACTGACCTCT TTAACCCAAGGGCGT ACA GTGCCCTTGGGTCGA TAGTGTTATAAGCCG Shewmr7_0070 84062 - 82923 - | transport protein, putative Shewmr7_0071 84885 - 84151 - | ABC transporter related Shewmr7_0072 86495 - 84888 - | TAP domain-containing protein Shewmr7_0073 86588 - 86953 + | GntR family transcriptional regulator TERM 100 87078 - 87048 - g 79 -7.7 -4.50159 | gap 1 TCTAACGTAAACAAA GTGTTTCG-TGGCA AAGG TGCCAGCGAAAAAC GTGCGCTCAAGGATC TERM 101 87324 - 87334 + G 70 -3.2 -4.83615 | GAGCGCGCCCTCGAT TTGC ACC GCAG TTTTTATCCCCACTG TERM 102 87566 - 87576 + G 70 -8.2 -3.72481 | overlap 87565 CTTGGCTCTCGAATC CGGC TCG GCCG TGTTGTTTTCATCCC TERM 103 87628 - 87649 + G 70 -11.6 -2.5789 | overlap 87627 GGGTCGCGAGCCATG TCGCCCTG ATTAAG CAGGGCGA GTTAGTGCTGTTTAA Shewmr7_0074 87000 - 87863 + | ABC transporter related TERM 104 88267 - 88285 + G 72 -8.2 -3.8211 | opp_overlap 88269, overlap 88260 GGTCTTTGCCCAAGG GATAAGCC TAG GGTTTATC TTGTTGTGCCTGCGG Shewmr7_0075 87860 - 89170 + | hypothetical protein TERM 105 90069 - 90057 - g 71 -7.7 -4.11216 | TGTGTATCTGCAAAA CACTC AAA GAGTG AAAGAGGCCATCAGC Shewmr7_0076 89299 - 91092 + | AMP-dependent synthetase and ligase TERM 106 91116 - 91130 + F 100 -12.8 -5.36441 | opp_overlap 91116 TCTTTGATCTTAAAA GGCCGC TTA GCGGCC TTTTTTGTGTCAGCC TERM 107 91130 - 91116 - f 100 -12.8 -4.13767 | opp_overlap 91116 TCTTTGATCTTAAAA GGCCGC TTA GCGGCC TTTTTTGTGTCAGCC Shewmr7_0077 91233 - 93722 + | MORN repeat-containing protein TERM 108 93763 - 93778 + F 77 -8.2 -3.92522 | opp_overlap 93763 93764 CTTGGTGGGGATAAA CGGGGC AAGC GCCTCG TTTGTCCCATTCACA Shewmr7_0078 93830 - 94240 + | thioesterase superfamily protein TERM 109 94250 - 94289 + F 80 -11.6 -2.59431 | overlap 94245 GCTTAAGTTTGATAT TTGCTTTCACCACGTAAT TGCA ATTACGTGGTGAAAACGC TACCTTGTCGGCCGC TERM 110 94312 - 94332 + F 71 -6.8 -4.12532 | opp_overlap 94309, overlap 94309 94313 TCGGCCGCAAATGTG ACGCGGAT CACTT ATCCGCGC TTTCTCTCTACCGGC TERM 111 94313 - 94331 + F 77 -10.3 -3.07198 | opp_overlap 94309, overlap 94309 94312 CGGCCGCAAATGTGA CGCGGAT CACTT ATCCGCG CTTTCTCTCTACCGG Shewmr7_0079 94358 - 94906 + | HPP family protein Shewmr7_0080 95190 - 94927 - | hypothetical protein TERM 112 94998 - 95028 + g 86 -13.3 -3.55761 | CTTTGGCCCACTTTA GGCCATGTCGAAC TAAAC GTTCGGCAAGGCC TTTGCCGCGTAGCTC Shewmr7_0081 95714 - 95250 - | thioesterase superfamily protein TERM 113 96091 - 96101 + G 76 -3.2 -5.12068 | overlap 96075 CGGCGCAGCTTGAGT CTGT GCA GCAG TTTTTATTGAATATC Shewmr7_0082 95862 - 96215 + | MerR family transcriptional regulator Shewmr7_0083 96287 - 96865 + | NAD(P)H dehydrogenase (quinone) Shewmr7_0084 96881 - 97276 + | glutathione-dependent formaldehyde-activating, GFA TERM 114 97323 - 97296 - T 100 -17.2 -4.1552 | opp_overlap 97302, overlap 97302 GATTTGCCCAATAAA CAAAAAGCGACC CTTG GGTCGCTTTTTG TGTGCAGTGCCGATA TERM 115 97317 - 97302 - T 100 -10.4 -5.47159 | opp_overlap 97302, overlap 97296 CCCAATAAACAAAAA GCGACC CTTG GGTCGC TTTTTGTGTGCAGTG TERM 116 97302 - 97317 + T 100 -10.4 -4.9792 | opp_overlap 97302 97296 CCCAATAAACAAAAA GCGACC CTTG GGTCGC TTTTTGTGTGCAGTG Shewmr7_0085 98019 - 97339 - | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase Shewmr7_0086 98383 - 98817 + | hypothetical protein Shewmr7_0087 98910 - 99923 + | hypothetical protein TERM 117 99941 - 99961 + F 72 -9.7 -2.87463 | opp_overlap 99929 99927 ACAGTCGCCTCAATT GCAGCCACA GAA TGTAGCTGC TCTATGCGACAGCTT Shewmr7_0088 100052 - 100783 + | hypothetical protein TERM 118 100844 - 100817 - T 86 -7.6 -4.60041 | opp_overlap 100821, overlap 100819 100821 AGGGAGCCGTAAAAA GACAGGGGCCGC CTAA GCTGCCCCTATA TTGAGATGATGTGAG TERM 119 100842 - 100819 - T 89 -10.2 -3.91506 | opp_overlap 100821, overlap 100817 100821 GGAGCCGTAAAAAGA CAGGGGCCGC CTAA GCTGCCCCTA TATTGAGATGATGTG TERM 120 100840 - 100821 - T 80 -10.6 -3.54256 | opp_overlap 100821, overlap 100819 100817 AGCCGTAAAAAGACA GGGGCCGC CTAA GCTGCCCC TATATTGAGATGATG TERM 121 100821 - 100840 + T 77 -10.6 -3.09289 | opp_overlap 100819 100817 100821 AGCCGTAAAAAGACA GGGGCCGC CTAA GCTGCCCC TATATTGAGATGATG Shewmr7_0089 102781 - 100874 - | hypothetical protein TERM 122 102989 - 103009 + H 82 -7.7 -4.49937 | opp_overlap 102982 102989 102988, overlap 102982 102978 TCACCCAACTAACAC TTAGTTGAT ATG GTCAACTAA TTTTGGTATTGTTGA TERM 123 103138 - 103109 - g 80 -2.7 -5.252 | gap 1, opp_overlap 103111, overlap 103111 103112 CATGCCTACAAAAAA CAGCTGCGTGCGGA TAT TGC-CGCGCAGCAG ATTGAATTGCCTGTC Shewmr7_0090 103052 - 103480 + | MarR family transcriptional regulator TERM 124 103485 - 103497 + F 73 -2.7 -5.15117 | CGGAAAGCTAACGAT TGAGT GCC ACTTA TTTTTTGGAGTTTTA Shewmr7_0091 103515 - 104267 + | FAD-binding 9, siderophore-interacting domain-containing protein TERM 125 104288 - 104316 + T 82 -10.3 -3.64703 | opp_overlap 104288 104291, overlap 104291 GATATGCTTACTAAA CAAGGCCGCCA GTATCCA TGGCGACCTTG TTTAGCTGAACCGCG TERM 126 104316 - 104288 - T 100 -12.5 -3.74251 | opp_overlap 104288 104291, overlap 104291 GATATGCTTACTAAA CAAGGCCGCCA GTATCCA TGGCGACCTTG TTTAGCTGAACCGCG TERM 127 104313 - 104291 - T 77 -8.4 -4.0031 | opp_overlap 104288 104291, overlap 104288 ATGCTTACTAAACAA GGCCGCCA GTATCCA TGGCGACC TTGTTTAGCTGAACC Shewmr7_0092 105560 - 104334 - | imidazolonepropionase Shewmr7_0093 105758 - 106465 + | histidine utilization repressor TERM 128 107893 - 107878 - g 70 -4.6 -4.61231 | opp_overlap 107890 CGAGATGGTGAAAAA CGGCGA GCTG TCGGCG CCGATCGTCATTGGT Shewmr7_0094 106589 - 108259 + | urocanate hydratase Shewmr7_0095 108309 - 109850 + | histidine ammonia-lyase TERM 129 109917 - 109947 + F 86 -12 -2.97747 | opp_overlap 109916 109922, overlap 109922 TAGCGACCAATAAAG TGAAAGGCATAGCG ATT TGCTATGCCTTTTG TCTATCCTATGCGGC TERM 130 109922 - 109942 + F 100 -11.9 -4.63586 | opp_overlap 109916 109922, overlap 109917 ACCAATAAAGTGAAA GGCATAGCG ATT TGCTATGCC TTTTGTCTATCCTAT TERM 131 109942 - 109922 - f 90 -11.2 -3.93864 | opp_overlap 109922 109917, overlap 109916 ACCAATAAAGTGAAA GGCATAGC GATTT GCTATGCC TTTTGTCTATCCTAT TERM 132 109959 - 109972 + F 75 -5.9 -4.72486 | overlap 109958 TTTGTCTATCCTATG CGGCG ATTT CGCTG TTTTTGCACTTTGTA TERM 133 110185 - 110195 + F 70 -5.4 -4.45077 | overlap 110187 GCCTATTTGACTATG GACA AAA TGTC TTTTGATGGTTTTTG TERM 134 110909 - 110899 - g 87 -8.2 -4.87665 | CCTGATTGAGAAAAA CGCC GAT GGCG TAACGGTTAACCGTT Shewmr7_0096 110459 - 111040 + | twin-arginine translocation pathway signal TERM 135 113224 - 113210 - g 70 -2.8 -4.82901 | overlap 113212 TTGGCGGCAGAAAAA GGCATT AAG AATGGC GATTGGGTGAAAGTG Shewmr7_0097 111089 - 113473 + | formate dehydrogenase alpha subunit TERM 136 113704 - 113676 - g 89 -10.4 -4.28548 | gap 1, overlap 113677 AGGGACTTATCAAAA CCCAGCATCTCTG TCGC CAGAG-TGCTGGA CCCTGATGAAGTACA TERM 137 113703 - 113677 - g 77 -11.7 -3.16647 | gap 1, overlap 113676 GGGACTTATCAAAAC CCAGCATCTCTG TCGC CAGAG-TGCTGG ACCCTGATGAAGTAC Shewmr7_0098 113476 - 114390 + | formate dehydrogenase beta subunit Shewmr7_0099 114387 - 115028 + | formate dehydrogenase gamma subunit TERM 138 115125 - 115113 - g 74 -7.7 -4.13767 | opp_overlap 115123 CGGTGGACCCTAAAA CTGTG TAT CACAG ACGGGCGCAGCGTTT TERM 139 115452 - 115473 + G 73 -5.1 -4.62441 | opp_overlap 115452, overlap 115453 GTCAGGGACATATGA GTGAAGTGC CCGC GCGCTTCAG TTTGTTTATCTGGGC Shewmr7_0100 115028 - 115936 + | formate dehydrogenase accessory protein FdhE TERM 140 115944 - 115970 + F 100 -13 -3.89695 | opp_overlap 115942 115943, overlap 115945 AGCAATAACCAAAGT TGGGAAGGGCTC ACC GAGTCCTTCCCC TTATATTTATCAAGA TERM 141 115945 - 115969 + F 100 -16.5 -2.93335 | opp_overlap 115942 115943, overlap 115944 GCAATAACCAAAGTT GGGAAGGGCTC ACC GAGTCCTTCCC CTTATATTTATCAAG TERM 142 116277 - 116258 - g 79 -9.2 -4.1721 | AGCCATAGTCTAAAA CCCGTGTG GAAC CTCACGGG AACCATACTGCATAC TERM 143 116299 - 116327 + G 74 -11 -3.16683 | gap 1, opp_overlap 116297 116296 ACTGCATACCAACCT TGGCCGCGCCCAG CAGT CTGAG-GCGGCCA TTCGTGCCGTAACCT TERM 144 116911 - 116922 + G 71 -7.2 -3.9941 | overlap 116920 TAAACTCCTCGGCGG CCCG CAAT CGGG TTTGATTGTCGGCAA TERM 145 117128 - 117148 + G 70 -9 -3.53563 | gap 1, overlap 117127 ATCGGTGAGCGCCTG CAGC-GCGC CTTA GCGCCGCTG TTTGCCCCGAGCTAT TERM 146 117197 - 117220 + G 76 -6 -4.62783 | gap 1, overlap 117195 TGCCAAACTCAAGTC GGTAGC-GGCT CGC AGCCCGATACC TTTTTACCCTCAATC Shewmr7_0101 115994 - 117415 + | selenocysteine synthase TERM 147 117779 - 117750 - g 81 -13.7 -3.14931 | gap 1 CTTAGTGCTGACCAA GCGG-GATTTGGTC GAT GACCAAACCGCCGC CAAGTTGACCCTAGA Shewmr7_0102 117412 - 119433 + | selenocysteine-specific translation elongation factor SelB Shewmr7_0103 119541 - 120377 + | formate dehydrogenase family accessory protein FdhD TERM 148 120455 - 120469 + F 81 -4.3 -5.34555 | GTGTGGCAACAGGTA TAAGC CTTGT GCTTA TTTTTTATAGTCTCG Shewmr7_0104 120502 - 121716 + | putative inner membrane protein Shewmr7_0105 121716 - 121949 + | hypothetical protein TERM 149 122007 - 121978 - T 100 -13.7 -3.62096 | opp_overlap 121984, overlap 121984 GGCCATCACGGCAAA GAAAAAGCGCTGC ATTG GCAGCGCTTTTTG ATCTTAGCCTTGGCA TERM 150 121984 - 122001 + T 100 -12.7 -4.87626 | opp_overlap 121978 121984 CACGGCAAAGAAAAA GCGCTGC ATTG GCAGCGC TTTTTGATCTTAGCC TERM 151 122001 - 121984 - T 100 -12.7 -5.28942 | opp_overlap 121984, overlap 121978 CACGGCAAAGAAAAA GCGCTGC ATTG GCAGCGC TTTTTGATCTTAGCC Shewmr7_0106 123354 - 122011 - | peptidase M48, Ste24p TERM 152 122401 - 122415 + g 71 -7 -4.27467 | opp_overlap 122400 ATCATCATAGTTAAT GCTGGC TGC GCCCGC TTTCTCTTGGTATTC Shewmr7_0107 124085 - 123471 - | hypothetical protein Shewmr7_0108 124416 - 125036 + | hypothetical protein Shewmr7_0109 126028 - 125039 - | hypothetical protein TERM 153 125137 - 125153 + g 75 -10.9 -3.34517 | opp_overlap 125137, overlap 125135 TGAATGAGAGGTAAA TCTGCTG TGT CAGCAGA TATTTAAGCCCAAAT TERM 154 125153 - 125137 - G 80 -10.9 -3.74158 | opp_overlap 125137 125135 TGAATGAGAGGTAAA TCTGCTG TGT CAGCAGA TATTTAAGCCCAAAT Shewmr7_0110 126772 - 126152 - | hypothetical protein Shewmr7_0111 126965 - 127348 + | hypothetical protein Shewmr7_0112 127581 - 128849 + | MscS mechanosensitive ion channel Shewmr7_0113 129469 - 128846 - | lysine exporter protein LysE/YggA TERM 155 129101 - 129080 - G 70 -2.3 -5.03145 | gap 1 TAACGCCGCAAAAAA CAGTAAGTCC TTA GGA-TTGCTG ATCCCTACTAAAAAT TERM 156 129344 - 129358 + g 76 -4.2 -5.0133 | overlap 129335 129345 GACACTGCCAAGCCC TGTGGC TAT GCTACG TTTTTTACCGAAATG Shewmr7_0114 130055 - 129495 - | phospholipid/glycerol acyltransferase Shewmr7_0115 130185 - 130634 + | hypothetical protein Shewmr7_0116 131458 - 130658 - | hypothetical protein TERM 157 131499 - 131461 - R 71 -8.2 -3.53164 | opp_overlap 131461 131463 AGAGTATGCACATAA CAGGCTAAGTTTATCCAA GGA TAAGGTTAACTTAGCCTG TCTATCGGCAAATGA Shewmr7_0117 133179 - 131521 - | hypothetical protein TERM 158 131886 - 131876 - G 70 -8.2 -3.7331 | overlap 131874 131877 ATTGCCAGCAAAATA CCGC GCT GCGG CCAGCTCATGAGTTT TERM 159 133525 - 133539 + G 76 -8.6 -4.15854 | TGATCATGGATCCCC TCGGTA ATT TACCGA TTTTCGCGTCGATTT TERM 160 133682 - 133704 + G 71 -7.6 -3.98627 | overlap 133683 AAATCTACGTTCCGA GTCCGTCAGC ATT GCTGGCGGGA TTATTCTATTCCTGA TERM 161 133683 - 133703 + G 73 -11.1 -2.98453 | overlap 133682 AATCTACGTTCCGAG TCCGTCAGC ATT GCTGGCGGG ATTATTCTATTCCTG TERM 162 133809 - 133827 + G 72 -9.6 -3.36803 | overlap 133815 CCTATGGCCATTCCA TTGATGGC GGG GCCATCGA TTCTGGCTGCGCTTA Shewmr7_0118 133476 - 134069 + | multiple antibiotic resistance (MarC)-related proteins TERM 163 134092 - 134114 + F 100 -10.6 -5.64274 | opp_overlap 134092 TATGTGTTGCAAGAA CCGCATTGAC ACT GTTGATGCGG TTTTTTTATGCCTAA TERM 164 134668 - 134680 + G 71 -10.5 -3.03124 | GCGATGATGCGCGCA CCCGC ACA GCGGG TGTTAGCGGATGCAG Shewmr7_0119 134368 - 137178 + | peptidase M6, immune inhibitor A TERM 165 137217 - 137199 - T 100 -8.9 -4.8622 | opp_overlap 137199 TGTGCTAACGAAAAA TGCCTCT GATAT AGAGGCA TTTTTGTTTTAGCTT TERM 166 137199 - 137217 + T 100 -9.6 -5.49568 | opp_overlap 137199 TGTGCTAACGAAAAA TGCCTCTG ATA TAGAGGCA TTTTTGTTTTAGCTT Shewmr7_0120 137807 - 137238 - | chorismate lyase Shewmr7_0121 137909 - 138319 + | flagellar basal body-associated protein FliL-like protein Shewmr7_0122 138379 - 139473 + | putative SAM-dependent methyltransferase TERM 167 139497 - 139479 - T 100 -12.4 -3.79874 | opp_overlap 139479 CGGGACATAATAGAA CAGGCGCC GAG AGCGCCTG TTTTTTTACTTAGCC TERM 168 139479 - 139497 + T 100 -11.7 -5.63103 | opp_overlap 139479 CGGGACATAATAGAA CAGGCGC CGAGA GCGCCTG TTTTTTTACTTAGCC Shewmr7_0123 139813 - 139517 - | hypothetical protein Shewmr7_0124 140501 - 139839 - | hypothetical protein Shewmr7_0125 141300 - 140539 - | molybdopterin biosynthesis protein MoeB Shewmr7_0126 142646 - 141312 - | molybdopterin molybdochelatase TERM 169 141512 - 141488 - G 76 -7.7 -4.3739 | opp_overlap 141501 141508 141511, overlap 141489 CATTGCGGGATAAAA TGCCGCGCTGA TAC TCGACGCGGCC GGGCTGTTTACGCAC TERM 170 141511 - 141489 - G 76 -11.2 -3.22113 | opp_overlap 141501 141508, overlap 141488 ATTGCGGGATAAAAT GCCGCGCTGA TAC TCGACGCGGC CGGGCTGTTTACGCA TERM 171 142013 - 141996 - G 82 -6.9 -4.83169 | overlap 141998 ACCTGTGGAGAAAAA CGCCACC TTAA GTTGGCG GTAAACCCGCACCTG Shewmr7_0127 142894 - 143430 + | Ferritin, Dps family protein TERM 172 143452 - 143465 + T 100 -8.1 -5.7946 | opp_overlap 143452 CCGCTAGGGTAAAAA GCAGC TTAG GCTGC TTTTTTTATTGAAGA TERM 173 143465 - 143452 - T 86 -8.1 -4.62069 | opp_overlap 143452 CCGCTAGGGTAAAAA GCAGC TTAG GCTGC TTTTTTTATTGAAGA Shewmr7_0128 146742 - 143509 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 174 146801 - 146785 - R 95 -7.3 -5.4251 | opp_overlap 146785 TGGAGACATAAAAAA TCAAGGC ATA ACCTTGA TGAGTTGAAAACGAA TERM 175 147074 - 147052 - R 100 -11.2 -5.30616 | opp_overlap 147052 GCAGGCAAATAAAAA GGACGCGGGC AGA GCCGACGTCC TTTAAATCGAATTCC TERM 176 147052 - 147074 + r 75 -9 -3.66874 | opp_overlap 147052 GCAGGCAAATAAAAA GGACGCGGGC AGA GCCGACGTCC TTTAAATCGAATTCC Shewmr7_0129 147757 - 147104 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 177 148398 - 148420 + H 71 -8.4 -3.57144 | overlap 148400 ATCAACTTATTGGCT TGCCGTCGTG CCC CACGATGGTG TTTGAACGTCACAAG TERM 178 148400 - 148418 + H 81 -11 -3.36515 | overlap 148398 CAACTTATTGGCTTG CCGTCGTG CCC CACGATGG TGTTTGAACGTCACA TERM 179 150108 - 150098 - g 70 -2.4 -4.96501 | GGCGATAAAAATAAA GTGG TGG CCTC GGGCGGCAGTGCTGG Shewmr7_0130 148445 - 150580 + | oligopeptidase B Shewmr7_0131 150603 - 151028 + | excinuclease ABC subunit C TERM 180 151147 - 151174 + F 81 -12 -2.56095 | overlap 151143 TACGTCCTTGTATGC TCGACCGTGACA TCCA TGTCACGGACGG TCACTTCCATGTCAG Shewmr7_0132 151673 - 152239 + | hypothetical protein Shewmr7_0133 152365 - 152700 + | hypothetical protein TERM 181 152984 - 152972 - T 73 -9.1 -3.55548 | TAAGAGCGTGCGAAA GCCTG CGG CAGGC AATTAGGGAATACTA Shewmr7_0134 153942 - 153085 - | LysR family transcriptional regulator Shewmr7_0135 154071 - 154760 + | NAD(P)H dehydrogenase (quinone) Shewmr7_0136 154753 - 155226 + | CMP/dCMP deaminase, zinc-binding protein Shewmr7_0137 155715 - 155212 - | hypothetical protein TERM 182 155422 - 155441 + g 72 -8.6 -3.90586 | CTGCTGCTGGCTCAA TGCGGCAT ACTC ATGCTGCA TTTGTAAAATAGTCT TERM 183 155871 - 155844 - R 90 -4.2 -5.60993 | opp_overlap 155848, overlap 155846 GGTCGCACAAAAAAA GATGCCACTA CAAGGGGT TAGTGGCATA AAGTGCATAAGAATG TERM 184 155869 - 155846 - R 76 -6.8 -4.45201 | opp_overlap 155848, overlap 155844 TCGCACAAAAAAAGA TGCCACTA CAAGGGGT TAGTGGCA TAAAGTGCATAAGAA Shewmr7_0138 156780 - 156004 - | putative lipoprotein TERM 185 157786 - 157764 - g 80 -13.5 -2.91912 | opp_overlap 157764 157768, overlap 157768 TTATGTACTCACACA CCAAGGGCA ACAGG TGCCCTTGG TGTATAGCATTAGCG TERM 186 157764 - 157786 + G 80 -13.5 -2.91681 | opp_overlap 157764 157768, overlap 157768 TTATGTACTCACACA CCAAGGGCA ACAGG TGCCCTTGG TGTATAGCATTAGCG Shewmr7_0139 157051 - 157818 + | methyltransferase type 11 Shewmr7_0140 159840 - 157843 - | peptidase M14, carboxypeptidase A TERM 187 159910 - 159891 - R 84 -11.4 -3.14564 | GTATCTTTTCATTAA GCCCCTGC GAGT GCAAGGGC TGCCATGGGTTTATC Shewmr7_0141 161090 - 159972 - | hypothetical protein TERM 188 161328 - 161301 - R 100 -9.3 -5.28176 | opp_overlap 161301, overlap 161313 TTTAGGTATAAAAAA GGCTTGAATAA GCAAGT CTATTCAAGCC TTGGTATATCAATGT Shewmr7_0142 162583 - 161354 - | sodium:dicarboxylate symporter Shewmr7_0143 163044 - 163400 + | hypothetical protein TERM 189 163468 - 163440 - T 100 -15.3 -3.52192 | CTTAAGCTGAGATAA GCGCCCCCGAG GAATCAA CTCAGGGGCGC GGATGGAGTAAGCTT Shewmr7_0144 165216 - 163483 - | hypothetical protein Shewmr7_0145 165622 - 167085 + | OmpA/MotB domain-containing protein TERM 190 167117 - 167145 + T 100 -8.8 -5.30616 | opp_overlap 167117 CAATAGATATAAAAA TGGCGTCAGCGC TTGTC GAGTTGGCGCCA TTTTTGTTTACCTGC TERM 191 167145 - 167117 - T 78 -4.4 -5.09685 | opp_overlap 167117 CAATAGATATAAAAA TGGCGTCAGCGC TTGTC GAGTTGGCGCCA TTTTTGTTTACCTGC Shewmr7_0146 168764 - 167205 - | AbgT putative transporter TERM 192 167983 - 167965 - G 73 -12.4 -2.64794 | overlap 167939 GCGAATTTGAGACCA CGGCGCTC ATG GAGCGCCA GCTCATCAAGCGTTG TERM 193 168268 - 168241 - G 70 -3.2 -4.83169 | overlap 168242 168243 ACTGTTGCAGAAAAA CCGCCGGATACG CCAG CAAAAGCGGCGG CAATACCGGCTAGGG TERM 194 168932 - 168957 + r 100 -14.7 -4.75372 | opp_overlap 168932 ACAGGCAAATAAAAA GCGCGGGTTCA TCGC TGACCCCGCGC TTTTTACTCAATAAT TERM 195 168957 - 168932 - R 100 -14.7 -5.31519 | opp_overlap 168932 ACAGGCAAATAAAAA GCGCGGGTTCA TCGC TGACCCCGCGC TTTTTACTCAATAAT Shewmr7_0147 170552 - 169011 - | phosphoenolpyruvate carboxykinase TERM 196 170424 - 170404 - G 70 -3.2 -4.89477 | overlap 170405 TCTTTAACAATAAAA CGATCGCC AGGAG AGCGACCA GTGCGGGTACCGGTT TERM 197 170732 - 170715 - R 100 -12.7 -5.24531 | AGGCGGTACAAAAAA GGGCACC CTGA GGTGCCC TGCTAACAGTAAATG hslO 171613 - 170753 - | Hsp33-like chaperonin Shewmr7_0149 172048 - 171650 - | RNA-binding S4 domain-containing protein TERM 198 172077 - 172067 - H 79 -6.8 -4.66537 | GTCTCCAAGATAAAA GCTC GAT GAGC TCACATGCTGAGCAA Shewmr7_0150 172300 - 173226 + | general secretion pathway protein C TERM 199 175071 - 175047 - g 87 -7.9 -4.93316 | overlap 175050 175068 TAAGAAGACCAAAAA GAACCTGATGA TCT TCATCAAGCCC ACCATTATCCGTGAT TERM 200 175068 - 175050 - g 82 -8.2 -4.53398 | overlap 175047 GAAGACCAAAAAGAA CCTGATGA TCT TCATCAAG CCCACCATTATCCGT Shewmr7_0151 173251 - 175353 + | general secretion pathway protein D Shewmr7_0152 175350 - 176915 + | type II secretion system protein E (GspE) TERM 201 178112 - 178142 + G 83 -3.2 -5.42514 | overlap 178115 CATTCTGCAACCTAT CTTGGCACTGAACA ATT TGATTAGTGGCTAG TTTTTTAATTTATGG Shewmr7_0153 176919 - 178142 + | general secretion pathway protein F Shewmr7_0154 178218 - 178652 + | general secretion pathway protein G TERM 202 178670 - 178705 + F 91 -8.2 -4.71426 | overlap 178671 TGTTAACGCTGCGCC ACGCCGGCTTCACCTT AATG GAGGTGATGCTGGTGA TTTTGTTAATGGGAC TERM 203 178671 - 178704 + F 89 -11.7 -3.42374 | overlap 178670 GTTAACGCTGCGCCA CGCCGGCTTCACCTT AATG GAGGTGATGCTGGTG ATTTTGTTAATGGGA TERM 204 179080 - 179070 - g 78 -2.4 -5.29716 | GGAAGATAAGAAAAA GCAC CCA GAGC CGCAGATTTTGCTGT Shewmr7_0155 178714 - 179226 + | general secretion pathway protein H Shewmr7_0156 179213 - 179581 + | general secretion pathway protein I TERM 205 179601 - 179591 - g 71 -6.8 -4.15508 | AACTAATGCTCAAAA GGGT TTT ACCC TGCTGGAAATGCTGA TERM 206 179617 - 179628 + G 76 -5.8 -4.66953 | TGCTGGAAATGCTGA TCGC GATT GCGA TTTTTGCCATGTTGG Shewmr7_0157 179562 - 180323 + | general secretion pathway protein J Shewmr7_0158 180320 - 181318 + | general secretion pathway protein K Shewmr7_0159 181367 - 182554 + | general secretion pathway protein L Shewmr7_0160 182556 - 183032 + | general secretion pathway M protein Shewmr7_0161 183047 - 183808 + | type II secretion system protein N TERM 207 183855 - 183840 - T 86 -10.4 -3.90318 | opp_overlap 183840 GCATGATTCGATAAA GGCACC TTAG GGTGCC TTTTGTATTTTAAGG TERM 208 183840 - 183855 + T 100 -10.4 -4.89567 | opp_overlap 183840 GCATGATTCGATAAA GGCACC TTAG GGTGCC TTTTGTATTTTAAGG Shewmr7_0162 184535 - 183873 - | HAD family hydrolase Shewmr7_0163 184817 - 185224 + | hypothetical protein TERM 209 185255 - 185243 - f 100 -10.5 -4.3467 | opp_overlap 185243 ATGTCGACATTAAAA GGGGC TTA GCCCC TTTTTTGTTGGTGAA TERM 210 185243 - 185255 + F 100 -10.5 -5.5112 | opp_overlap 185243 ATGTCGACATTAAAA GGGGC TTA GCCCC TTTTTTGTTGGTGAA nudE 185462 - 186013 + | ADP-ribose diphosphatase NudE Shewmr7_0165 186084 - 186896 + | 3'(2'),5'-bisphosphate nucleotidase Shewmr7_0166 186903 - 187346 + | GCN5-related N-acetyltransferase TERM 211 187367 - 187390 + F 100 -8.8 -5.26316 | opp_overlap 187367 AGTTCAATGTCGAAA CGGTGTCTTC GATT GAGGGCGCCG TTTTTTATGCGCTAA Shewmr7_0167 187576 - 188187 + | TetR family transcriptional regulator TERM 212 188329 - 188351 + G 81 -6.2 -4.98616 | TGTTTGTCAATTTGG CGGCGGGG GTCTTTA TCCTGCCG TTTTTCCTATTTTCG TERM 213 189109 - 189122 + G 76 -8.1 -4.15061 | CGATTCCTCCCGCAC CTGCG GATG CGCAG TTTGTCTATGGCTTA Shewmr7_0168 188178 - 190040 + | phospholipid/glycerol acyltransferase TERM 214 190087 - 190058 - T 75 -8.7 -3.68962 | gap 1, opp_overlap 190063, overlap 190063 TGCCAATATAGATAA GAAAACCGTG-GCA ATC TGCGCACGGTTTTT TGTTTTTAGCGTTCT TERM 215 190063 - 190082 + T 100 -8.6 -5.93252 | gap 1, opp_overlap 190063 190058 ATATAGATAAGAAAA CCGTG-GCA ATC TGCGCACGG TTTTTTGTTTTTAGC TERM 216 190082 - 190063 - T 100 -8.6 -4.88495 | gap 1, opp_overlap 190063, overlap 190058 ATATAGATAAGAAAA CCGTG-GCA ATC TGCGCACGG TTTTTTGTTTTTAGC Shewmr7_0169 191202 - 190093 - | tRNA 2-selenouridine synthase TERM 217 190739 - 190727 - G 73 -3.3 -5.00616 | opp_overlap 190715, overlap 190728 CGTCGTTTTAAAAAA TCGGT TTT ACCGC TTCCCGTCATACCGC Shewmr7_0170 192260 - 191202 - | selenophosphate synthase TERM 218 192308 - 192333 + r 77 -10.4 -3.23708 | opp_overlap 192305 192303 192308 192310, overlap 192306 192305 AACATCATAATAGGA TACGGCCACC ATGCAA GGCGGCCGTA TGATTTTTACCGAGA TERM 219 192333 - 192308 - R 89 -12.6 -2.82988 | opp_overlap 192308 192306 192305, overlap 192305 192303 192310 AACATCATAATAGGA TACGGCCACC ATGCAA GGCGGCCGTA TGATTTTTACCGAGA TERM 220 192331 - 192310 - R 79 -10.8 -2.9544 | opp_overlap 192308 192306 192305, overlap 192308 192305 192303 CATCATAATAGGATA CGGCCACC ATGCAA GGCGGCCG TATGATTTTTACCGA TERM 221 192370 - 192388 + r 81 -5.2 -5.1675 | CTCTAGCTATAACTT GCTGTGAG GCT CTTCCAGC TTTTTTGCTGAGTCA Shewmr7_0171 193484 - 192357 - | Delta-9 acyl-phospholipid desaturase Shewmr7_0172 193607 - 194221 + | DNA-binding transcriptional repressor FabR TERM 222 194269 - 194247 - T 100 -15 -4.62783 | opp_overlap 194247 194251, overlap 194251 GATTTAGCCCAAAAA TAAAGGAGCC AAT GGCTCCTTTA TTTTTGGGTACATAG TERM 223 194247 - 194269 + T 100 -15 -4.67353 | opp_overlap 194247 194251, overlap 194251 GATTTAGCCCAAAAA TAAAGGAGCC AAT GGCTCCTTTA TTTTTGGGTACATAG TERM 224 194265 - 194251 - T 100 -11.4 -4.87389 | opp_overlap 194247 194251, overlap 194247 TAGCCCAAAAATAAA GGAGCC AAT GGCTCC TTTATTTTTGGGTAC TERM 225 194251 - 194265 + T 100 -11.4 -4.89063 | opp_overlap 194251 194247, overlap 194247 TAGCCCAAAAATAAA GGAGCC AAT GGCTCC TTTATTTTTGGGTAC Shewmr7_0173 195388 - 194291 - | tRNA (uracil-5-)-methyltransferase Shewmr7_0174 195530 - 196348 + | glutamate racemase Shewmr7_0175 196824 - 196360 - | RNP-1 like RNA-binding protein TERM 226 197220 - 197194 - H 81 -7.2 -4.66609 | overlap 197196 TACTTGACGCAAAAA CGGGAATGCGTA GAA TACGCAGCCCTG ACCCGCTGAAATCAC TERM 227 197342 - 197320 - H 70 -7.1 -3.76952 | gap 1 TTGAGTTAATCGAAA TTACTCTGCC GTTT GGC-GAGTAA TCAAAATTTAAATCA TERM 228 199416 - 199446 + H 100 -8.5 -5.00884 | opp_overlap 199415 AATCTGGTTAGAGAT GCCAAAGATAA ACTGAAAAA TTATCTTTGGC TTTTTTAAGCCCGCT TERM 229 199571 - 199531 - H 84 -2.7 -5.63374 | opp_overlap 199538 199543 199545 199550, overlap 199545 TTAATACGAAAAAAA TTGAGTTCTTAAAACACTT TTT AAGTGTCTTGAATATTCAA GTCTAAGGCGAGTCC TERM 230 200151 - 200139 - H 83 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 231 200949 - 200933 - H 85 -9.4 -4.08546 | overlap 200946 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 232 201403 - 201431 + H 72 -8.1 -3.85698 | TCCCTAAGCTGACGG CAGTCGCAGATAC CAG GTGGCTGCAACTG TTTATCAAAAACACA TERM 233 202617 - 202605 - H 72 -6.3 -4.2586 | TTAGACGAATACAAA CACTT AAG AAGTG GCACTCAATACAGCT TERM 234 202908 - 202940 + H 100 -11.4 -4.24123 | opp_overlap 202915, overlap 202915 AAGCGCCTAATTAAA CGATAAAGCCAGCT GAATA AGCTGGCTTTTTTG TTTTCGCGTTCTTAA TERM 235 202933 - 202915 - H 91 -10.3 -4.17448 | opp_overlap 202908 202915 TAATTAAACGATAAA GCCAGCT GAATA AGCTGGC TTTTTTGTTTTCGCG TERM 236 202915 - 202933 + H 100 -10.3 -5.79595 | opp_overlap 202915, overlap 202908 TAATTAAACGATAAA GCCAGCT GAATA AGCTGGC TTTTTTGTTTTCGCG Shewmr7_0176 203066 - 204121 + | UDP-N-acetylmuramate dehydrogenase TERM 237 204335 - 204356 + G 74 -2.3 -5.13722 | gap 1, opp_overlap 204338, overlap 204336 204340 CTCGGCTCGGTTAAT TCAGTCGATT GAT AATCG-CTGC TTTTATTTTGATGAG Shewmr7_0177 204114 - 205073 + | biotin--protein ligase Shewmr7_0178 206025 - 205075 - | pantothenate kinase Shewmr7_0179 206138 - 206269 + | hypothetical protein TERM 238 206322 - 206335 + F 74 -6.7 -4.25283 | CCCGAGTTCGACTCT TGGTG CCGG CACCA TTTTACTGGAGGGGT TERM 239 206588 - 206572 - f 76 -10.9 -2.62616 | overlap 206574 TCAGTTGGTAGAGCA CACCCTT GGT AAGGGTG AGGTCGGCAGTTCGA TERM 240 206659 - 206683 + F 85 -4.4 -5.4492 | gap 1, overlap 206661 TACCTAAATAATCGG TTCGATGTCAT TTAT ATG-CATCGGA TTTTTTCTATATGTA Shewmr7_0180 206737 - 207921 + | elongation factor Tu TERM 241 207943 - 207972 + F 84 -10.9 -3.69734 | opp_overlap 207950, overlap 207950 ACTTAGATATAGTGC TGAAAAAGGAAGC TTAG GCTTCCTTTTTTG TTTAAGTCGATTATT TERM 242 207950 - 207965 + F 100 -9 -5.65927 | opp_overlap 207950, overlap 207943 TATAGTGCTGAAAAA GGAAGC TTAG GCTTCC TTTTTTGTTTAAGTC TERM 243 207965 - 207950 - f 100 -9 -4.59109 | opp_overlap 207943 207950 TATAGTGCTGAAAAA GGAAGC TTAG GCTTCC TTTTTTGTTTAAGTC secE 208199 - 208570 + | preprotein translocase subunit SecE Shewmr7_0182 208580 - 209131 + | transcription antitermination protein nusG TERM 244 209203 - 209150 - f 80 -4.5 -5.23644 | gap 1, opp_overlap 209159 209162, overlap 209151 AATTAAATACAAAAA TCCGTTTGGCAACGGGTGCGGATT TCTATAT AATCCGCACCCGTTGTTTT-CGGG GGAGCACGTCGGCAT TERM 245 209202 - 209151 - f 70 -8 -3.71747 | gap 1, opp_overlap 209159 209162, overlap 209150 ATTAAATACAAAAAT CCGTTTGGCAACGGGTGCGGATT TCTATAT AATCCGCACCCGTTGTTTT-CGG GGGAGCACGTCGGCA TERM 246 209159 - 209195 + F 100 -21.1 -4.07568 | opp_overlap 209151 209150, overlap 209162 CAAAAATCCGTTTGG CAACGGGTGCGGATT TCTATAT AATCCGCACCCGTTG TTTTCGGGGGAGCAC TERM 247 209162 - 209192 + F 100 -17 -4.17048 | opp_overlap 209151 209150, overlap 209159 AAATCCGTTTGGCAA CGGGTGCGGATT TCTATAT AATCCGCACCCG TTGTTTTCGGGGGAG TERM 248 209427 - 209405 - g 80 -2.7 -5.36441 | overlap 209407 CCCGTACAGAAAAAA TGGAAAAAG GCATG CCTATTCCA GTCGTGATCACTGTA rplK 209260 - 209688 + | 50S ribosomal protein L11 rplA 209693 - 210394 + | 50S ribosomal protein L1 TERM 249 210400 - 210436 + F 76 -11 -2.53015 | opp_overlap 210403 210404, overlap 210404 AGCTAACTAATTTTA CAAGGTACGTGCATTA GTCTA TAATGCGCGCACTTTG TGGGTTGAAGCCTGT TERM 250 210404 - 210432 + F 77 -8.2 -3.97368 | opp_overlap 210403 210404, overlap 210400 AACTAATTTTACAAG GTACGTGCATTA GTCTA TAATGCGCGCAC TTTGTGGGTTGAAGC TERM 251 210802 - 210792 - g 73 -3.2 -5.00616 | GGTCTGCGTAAAAAA GCTC GCG AAGC TGGTGTTTATGTACG rplJ 210660 - 211160 + | 50S ribosomal protein L10 TERM 252 211178 - 211146 - f 77 -6.4 -4.72272 | gap 1, opp_overlap 211149 211152 CTGCGCGATCAAAAA CAAGAAGCC-GCTTA ATTT TAAGCTGGCTGCTTA ATAAAATTGAATTCA rplL 211215 - 211586 + | 50S ribosomal protein L7/L12 TERM 253 211626 - 211651 + F 100 -13.3 -5.08169 | AGCCAATTGGGTGGA GGCTGGCGGTT TTTT AACCGTCGGCC TTTTTTGCGCTATAT Shewmr7_0187 211829 - 215866 + | DNA-directed RNA polymerase, beta subunit TERM 254 215924 - 215899 - f 82 -10.4 -3.65812 | opp_overlap 215898 215897, overlap 215900 CGTTTGGCAACAGAA TGGTGCTCCG TGAGAG CGGAGCACCC GGTTTAACTCCTTCA TERM 255 215923 - 215900 - f 95 -13.9 -2.79273 | opp_overlap 215898 215897, overlap 215899 GTTTGGCAACAGAAT GGTGCTCCG TGAGAG CGGAGCACC CGGTTTAACTCCTTC Shewmr7_0188 215950 - 220167 + | DNA-directed RNA polymerase subunit beta' TERM 256 220162 - 220146 - f 83 -10.9 -3.55444 | opp_overlap 220145 220133 CGCTGACCTGTTAAA CTTGGCT GGC AGCCAAG ATTAAGTGAACAGTT TERM 257 220203 - 220189 - f 100 -12.8 -5.06816 | opp_overlap 220189 AGTTTGTAACAAAAA GGCGCC AAT GGCGCC TTTTTTATTGGAAAA TERM 258 220189 - 220203 + F 100 -12.8 -5.4505 | opp_overlap 220189 AGTTTGTAACAAAAA GGCGCC AAT GGCGCC TTTTTTATTGGAAAA rpsL 220347 - 220721 + | 30S ribosomal protein S12 Shewmr7_0190 220802 - 221272 + | 30S ribosomal protein S7 TERM 259 221278 - 221301 + F 100 -16.8 -4.03167 | CCGTTGGTAATCTGA TGGTGTGGGC TTAG GCCCACACCA TTGTTGTTGATATTG TERM 260 222673 - 222636 - g 73 -5.5 -4.7219 | opp_overlap 222636 CAGACCAAGATAAAA TGGGTATCGCGCTGCAA AAAC TCGCAGCGGAAGATCCA TCCTTCCGGGTTGAG TERM 261 223161 - 223141 - g 71 -5.3 -4.57073 | opp_overlap 223139 223137 223141 TATGGGCTTCAAAAA GGGTGCGCT CGA AGCGAATCC TGTGTTGCTCGAGCC Shewmr7_0191 221351 - 223447 + | elongation factor G TERM 262 223477 - 223492 + F 72 -7.6 -3.78934 | ATAAATGTAATATGG TCCTGT TGAT ACAGGA TTATTCTGAAAAGAA Shewmr7_0192 223519 - 224703 + | elongation factor Tu TERM 263 224725 - 224754 + F 100 -13.1 -4.14511 | opp_overlap 224732, overlap 224732 ACTTAGATATAGTAC TGAAAAAGGAAGC TTAG GCTTCCTTTTTTA TTTTGGGCTGGCGTT TERM 264 224732 - 224747 + F 100 -9 -5.79595 | opp_overlap 224732, overlap 224725 TATAGTACTGAAAAA GGAAGC TTAG GCTTCC TTTTTTATTTTGGGC TERM 265 224747 - 224732 - f 100 -9 -4.69664 | opp_overlap 224732 224725 TATAGTACTGAAAAA GGAAGC TTAG GCTTCC TTTTTTATTTTGGGC TERM 266 224968 - 225008 + F 80 -2.7 -5.4251 | gap 2, opp_overlap 224968, overlap 224971 CGAACGGTTAAATCA TCTCGCTCT-GCTT-TTCC AGTAA GGAAGAAGCTAGAGGGTGA TTTTTTATGTGTCCA rpsJ 225042 - 225353 + | 30S ribosomal protein S10 TERM 267 225931 - 225911 - g 71 -6.9 -4.21194 | opp_overlap 225911 TGTTACTACTCAAAA TCTAGACGT TGT ACGTGTAGA TGTTGAACGTAACCT rplC 225381 - 226019 + | 50S ribosomal protein L3 rplD 226037 - 226642 + | 50S ribosomal protein L4 rplW 226639 - 226944 + | 50S ribosomal protein L23 rplB 226961 - 227785 + | 50S ribosomal protein L2 rpsS 227800 - 228078 + | 30S ribosomal protein S19 rplV 228094 - 228426 + | 50S ribosomal protein L22 rpsC 228436 - 229128 + | 30S ribosomal protein S3 TERM 268 229207 - 229228 + G 87 -9.5 -4.34402 | GCGGTCTAGCGAACG GTACCGAAG TTAG CTTTGGTAC TTTTGGTCTGAAAGC rplP 229140 - 229550 + | 50S ribosomal protein L16 Shewmr7_0202 229550 - 229741 + | 50S ribosomal protein L29 Shewmr7_0203 229741 - 229989 + | SSU ribosomal protein S17P TERM 269 230008 - 230036 + F 100 -12.5 -5.20216 | opp_overlap 230012 TATTAGGTATTTAGG TAAACGGCTCCAG TAT TTGGGGCCGTTTG TTTTTTAATACTATA TERM 270 230032 - 230012 - f 73 -8.2 -3.66999 | opp_overlap 230008 AGGTATTTAGGTAAA CGGCTCCA GTATT TGGGGCCG TTTGTTTTTTAATAC rplN 230168 - 230536 + | 50S ribosomal protein L14 TERM 271 230711 - 230688 - g 79 -7.4 -4.55446 | CAAGAAACACCAAAA GCCAAACCCA CAAC TGGGTGTAGC CGGTGGTATTGTTGA TERM 272 230844 - 230824 - g 80 -4.7 -5.09173 | GAAGACGGCAAAAAA GTTCGTTTC TTC AAATCGAAC AGTGAACTCGTTAAG rplX 230548 - 230862 + | 50S ribosomal protein L24 rplE 230875 - 231414 + | 50S ribosomal protein L5 rpsN 231425 - 231730 + | 30S ribosomal protein S14 rpsH 231755 - 232147 + | 30S ribosomal protein S8 rplF 232158 - 232691 + | 50S ribosomal protein L6 rplR 232702 - 233052 + | 50S ribosomal protein L18 rpsE 233065 - 233568 + | 30S ribosomal protein S5 rpmD 233575 - 233757 + | 50S ribosomal protein L30 rplO 233761 - 234195 + | 50S ribosomal protein L15 TERM 273 234706 - 234690 - g 71 -10.9 -3.16564 | opp_overlap 234692 TTGTGAGCTTAGTAA CAGGAAC TAT GTTCCTG ATGTGGCTAGGTGAA secY 234203 - 235543 + | preprotein translocase subunit SecY rpmJ 235565 - 235678 + | 50S ribosomal protein L36 TERM 274 235683 - 235718 + F 74 -7.6 -3.93256 | opp_overlap 235685 235687, overlap 235685 235686 GTCAAGGCTAATAGA AAGATTGTTCAGCCCA ATGT TGGGCTGAACAAAATA TTGTTTGCAAATCTG TERM 275 235716 - 235685 - f 91 -10.2 -4.21439 | opp_overlap 235683 235685 235686, overlap 235687 CAAGGCTAATAGAAA GATTGTTCAGCCCA ATGT TGGGCTGAACAAAA TATTGTTTGCAAATC TERM 276 235685 - 235716 + F 80 -10.2 -3.55202 | opp_overlap 235685 235687, overlap 235683 235686 CAAGGCTAATAGAAA GATTGTTCAGCCCA ATGT TGGGCTGAACAAAA TATTGTTTGCAAATC TERM 277 235686 - 235715 + F 93 -13.7 -2.72639 | opp_overlap 235685 235687, overlap 235685 235683 AAGGCTAATAGAAAG ATTGTTCAGCCCA ATGT TGGGCTGAACAAA ATATTGTTTGCAAAT TERM 278 235714 - 235687 - f 100 -17.2 -3.69842 | opp_overlap 235686 235685 235683, overlap 235685 AGGCTAATAGAAAGA TTGTTCAGCCCA ATGT TGGGCTGAACAA AATATTGTTTGCAAA rpsM 235794 - 236150 + | 30S ribosomal protein S13 Shewmr7_0217 236165 - 236557 + | 30S ribosomal protein S11 rpsD 236589 - 237209 + | 30S ribosomal protein S4 Shewmr7_0219 237234 - 238223 + | DNA-directed RNA polymerase subunit alpha rplQ 238264 - 238659 + | 50S ribosomal protein L17 TERM 279 238676 - 238706 + T 100 -15.6 -4.67168 | opp_overlap 238673 238683, overlap 238683 TAAGGCTACAAAGTT TGAAAAACCGGGCT CTA AGCCCGGTTTTTTG TTTTTAGCACTTTTT TERM 280 238683 - 238699 + T 100 -13.7 -5.93252 | opp_overlap 238683, overlap 238676 ACAAAGTTTGAAAAA CCGGGCT CTA AGCCCGG TTTTTTGTTTTTAGC TERM 281 238699 - 238683 - T 100 -13.7 -4.6526 | opp_overlap 238683 238676 ACAAAGTTTGAAAAA CCGGGCT CTA AGCCCGG TTTTTTGTTTTTAGC TERM 282 239811 - 239798 - T 100 -8.1 -5.4505 | opp_overlap 239798 239797 TCGGCCAATAAAAAA GCCTC CGAA GAGGC CTTTTAGGTATTTAG Shewmr7_0222 240326 - 239841 - | cytochrome c-type biogenesis protein CcmE Shewmr7_0223 240523 - 240323 - | Heme exporter protein D (CcmD) Shewmr7_0224 241269 - 240523 - | heme exporter protein CcmC Shewmr7_0225 241957 - 241271 - | heme exporter protein CcmB Shewmr7_0226 242619 - 241969 - | cytochrome c biogenesis protein CcmA TERM 283 242033 - 242062 + g 70 -10.1 -3.33315 | gap 1 ATAATGCCCATATCT TGGTGGGTG-GTGA GGA TCACACAGCCACCA TTATCCGCATGTTGA Shewmr7_0227 242945 - 243244 + | cytochrome c, class I TERM 284 243256 - 243288 + T 81 -11.6 -2.89564 | gap 1, opp_overlap 243266, overlap 243266 GTAATTTTTCAGTGT TAACAAAAAACCGGC ATTA GCCGGTTTTTT-TTA TGTCTGCGCTAAGCC TERM 285 243279 - 243266 - T 100 -9.5 -5.45652 | opp_overlap 243266 243256 AGTGTTAACAAAAAA CCGGC ATTA GCCGG TTTTTTTTATGTCTG TERM 286 243266 - 243279 + T 100 -9.5 -6.06529 | opp_overlap 243266, overlap 243256 AGTGTTAACAAAAAA CCGGC ATTA GCCGG TTTTTTTTATGTCTG Shewmr7_0228 244581 - 243334 - | TPR repeat-containing protein TERM 287 244626 - 244613 - H 79 -8.1 -4.37886 | TTAGTTTGCATAAAA GCGGT TGTT ACCGC CGGCTTGGAAGCAAG Shewmr7_0229 244981 - 246960 + | cytochrome c-type biogenesis protein CcmF Shewmr7_0230 246972 - 247526 + | periplasmic protein thiol--disulphide oxidoreductase DsbE Shewmr7_0231 247523 - 248002 + | cytochrome C biogenesis protein TERM 288 248509 - 248475 - g 71 -6.5 -4.2558 | gap 1, opp_overlap 248483, overlap 248476 248486 TATTCTCGATCAAAA CGGCCAATTGATCGCA TTTG TGCGATC-ATTTGTCG ACTGGGATGACGCAA TERM 289 248483 - 248502 + G 82 -10.8 -3.89524 | opp_overlap 248475 248476 248486 ATCAAAACGGCCAAT TGATCGCA TTTG TGCGATCA TTTGTCGACTGGGAT Shewmr7_0232 247999 - 248580 + | redoxin domain-containing protein TERM 290 248634 - 248620 - f 93 -10 -4.36914 | opp_overlap 248620 CGCCGTTGTAGAAAA GATCGC CAT GCGATC TTTTTTCTTTTAAAA TERM 291 248620 - 248634 + F 100 -10 -5.79595 | opp_overlap 248620 CGCCGTTGTAGAAAA GATCGC CAT GCGATC TTTTTTCTTTTAAAA TERM 292 248822 - 248808 - f 73 -8.6 -3.63805 | ACGCGACACGGGAAA TGCGTA CAA TACGCA GCCCTGACCCGCTGA TERM 293 248949 - 248927 - f 70 -7.1 -3.76952 | gap 1 TTGAGTTAATCGAAA TTACTCTGCC GTTT GGC-GAGTAA TCAAAGAATTAAATC TERM 294 250817 - 250777 - f 84 -2.7 -5.63374 | opp_overlap 250784 250789 250791 250796, overlap 250791 TTAATACGAAAAAAA TTGAGTTCTTAAAACACTT TTT AAGTGTCTTGAATATTCAA GTCTAAGGCGAGTCC TERM 295 251397 - 251385 - f 83 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 296 252195 - 252179 - f 85 -9.4 -4.08546 | overlap 252192 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 297 252649 - 252677 + F 72 -8.1 -3.85698 | TCCCTAAGCTGACGG CAGTCGCAGATAC CAG GTGGCTGCAACTG TTTATCAAAAACACA TERM 298 253863 - 253851 - f 72 -6.3 -4.2586 | TTAGACGAATACAAA CACTT AAG AAGTG GCACTCAATACAGCT TERM 299 254154 - 254186 + F 100 -11.4 -4.70879 | opp_overlap 254161, overlap 254161 AAGCGCCTAATTAAA CGATAAAGCCAGCT GAATA AGCTGGCTTTTTTG TTTTTCGCGTTTGCC TERM 300 254179 - 254161 - f 91 -10.3 -4.17448 | opp_overlap 254154 254161 TAATTAAACGATAAA GCCAGCT GAATA AGCTGGC TTTTTTGTTTTTCGC TERM 301 254161 - 254179 + F 100 -10.3 -5.93252 | opp_overlap 254161, overlap 254154 TAATTAAACGATAAA GCCAGCT GAATA AGCTGGC TTTTTTGTTTTTCGC Shewmr7_0233 254400 - 255677 + | competence/damage-inducible protein CinA TERM 302 255748 - 255721 - T 74 -10 -3.14132 | opp_overlap 255727, overlap 255727 GTCTGGCTGGATTAA CAAAAATGCTCC CGAG GGAGCATTTTTT ATGGCGAATGGTTTG TERM 303 255742 - 255727 - T 100 -9 -5.1356 | opp_overlap 255727, overlap 255721 CTGGATTAACAAAAA TGCTCC CGAG GGAGCA TTTTTTATGGCGAAT TERM 304 255727 - 255742 + T 100 -9 -5.24531 | opp_overlap 255721 255727 CTGGATTAACAAAAA TGCTCC CGAG GGAGCA TTTTTTATGGCGAAT Shewmr7_0234 256321 - 255776 - | hypothetical protein Shewmr7_0235 258990 - 256321 - | phosphoenolpyruvate carboxylase TERM 305 259074 - 259028 - H 72 -9.6 -3.10589 | opp_overlap 259030 TAAAAATCCGCAATA TACCCAAACAACCTGTAG GTGATGAGAGT CTTCAGGTCGCTTGGGTA TATAGCCCGCTAGCA argC 259656 - 260636 + | N-acetyl-gamma-glutamyl-phosphate reductase Shewmr7_0237 260668 - 261450 + | acetylglutamate kinase TERM 306 261512 - 261494 - g 70 -9.6 -3.30972 | opp_overlap 261490 261494 CGATAAAAGAGTTAA CCCAGCAA CAG TTGCTGGA TCTGATTACCTTGGC TERM 307 261988 - 262008 + G 77 -9.7 -3.79747 | opp_overlap 261988 GGTGCCACCATGACA GTGATCTGC CCT GCGGGTCAC TTTCCTGATGGCTAC Shewmr7_0238 261463 - 262368 + | ornithine carbamoyltransferase Shewmr7_0239 262429 - 263652 + | argininosuccinate synthase TERM 308 263667 - 263681 + F 100 -12.8 -5.47431 | opp_overlap 263653 263667 ATAGGCAGACTCAAA GGGCGC CTA GCGCCC TTTTTTATATCTTAA TERM 309 263681 - 263667 - f 100 -12.8 -3.72141 | opp_overlap 263667, overlap 263653 ATAGGCAGACTCAAA GGGCGC CTA GCGCCC TTTTTTATATCTTAA Shewmr7_0240 263736 - 265103 + | argininosuccinate lyase TERM 310 265151 - 265120 - T 77 -10.3 -3.21912 | opp_overlap 265127, overlap 265127 GCTTTAATCGAGTAA TAAAAAACGCGAC TCTAGG GTCGCGTTTTTTT ATGGTGATTTATTCT TERM 311 265127 - 265144 + T 100 -9.1 -5.67967 | opp_overlap 265120 265127 TCGAGTAATAAAAAA CGCGACT CTAG GGTCGCG TTTTTTTATGGTGAT TERM 312 265144 - 265127 - T 100 -8.4 -5.5112 | opp_overlap 265127, overlap 265120 TCGAGTAATAAAAAA CGCGAC TCTAGG GTCGCG TTTTTTTATGGTGAT Shewmr7_0241 267684 - 265165 - | 1A family penicillin-binding protein Shewmr7_0242 267876 - 268955 + | type IV pilus assembly protein PilM TERM 313 268983 - 268957 - g 79 -8.8 -4.20025 | AATGGCGAACATAAA CCTGCTTCCT TGGCGTG AGGAAGCAAG AGAAAAGCAGAAGCG Shewmr7_0243 268943 - 269527 + | fimbrial assembly family protein Shewmr7_0244 269524 - 270150 + | pilus assembly protein, PilO TERM 314 270395 - 270383 - g 70 -3.3 -4.79223 | overlap 270376 TGATACCAGCAAAAA CTGCT TAC AGCCG GATTTGAAACGTCGT Shewmr7_0245 270150 - 270665 + | pilus assembly protein, PilQ TERM 315 270703 - 270722 + G 74 -2.2 -5.0916 | overlap 270701 TGAAATCTTCTGCCG CGATAA AAATCCCG TTATCG TTTTTATCTTCAGGC Shewmr7_0246 270687 - 272741 + | type IV pilus secretin PilQ TERM 316 272758 - 272790 + F 100 -18 -2.89683 | opp_overlap 272761 272765, overlap 272761 272765 CGTTTGTTATGGGTA GAATAAAGCCAGCA TACTT TGCTGGCTTTATTC TGTCTGAAATACAAT TERM 317 272761 - 272787 + F 100 -13.9 -3.59698 | opp_overlap 272761 272765, overlap 272758 272765 TTGTTATGGGTAGAA TAAAGCCAGCA TACTT TGCTGGCTTTA TTCTGTCTGAAATAC TERM 318 272787 - 272761 - f 100 -13.9 -3.31144 | opp_overlap 272761 272758 272765, overlap 272765 TTGTTATGGGTAGAA TAAAGCCAGCA TACTT TGCTGGCTTTA TTCTGTCTGAAATAC TERM 319 272783 - 272765 - f 100 -10.3 -4.31433 | opp_overlap 272765 272761 272758, overlap 272761 TATGGGTAGAATAAA GCCAGCA TACTT TGCTGGC TTTATTCTGTCTGAA TERM 320 272765 - 272783 + F 100 -10.3 -4.42974 | opp_overlap 272761 272765, overlap 272761 272758 TATGGGTAGAATAAA GCCAGCA TACTT TGCTGGC TTTATTCTGTCTGAA Shewmr7_0247 272961 - 273476 + | shikimate kinase I Shewmr7_0248 273482 - 274561 + | 3-dehydroquinate synthase Shewmr7_0249 274601 - 275995 + | sporulation domain-containing protein Shewmr7_0250 276044 - 276883 + | DNA adenine methylase Shewmr7_0251 277093 - 276908 - | hypothetical protein Shewmr7_0252 277458 - 277093 - | hypothetical protein Shewmr7_0253 277721 - 278398 + | ribulose-5-phosphate 3-epimerase Shewmr7_0254 278398 - 279081 + | phosphoglycolate phosphatase Shewmr7_0255 279118 - 280116 + | tryptophanyl-tRNA synthetase TERM 321 280154 - 280175 + T 100 -10.1 -5.46276 | opp_overlap 280154 ACAACACTCGATTAA GCCGACCTA TTCT TCGGTCGGC TTTTTTATGTCTGTT TERM 322 280175 - 280154 - T 74 -10.1 -3.19003 | opp_overlap 280154 ACAACACTCGATTAA GCCGACCTA TTCT TCGGTCGGC TTTTTTATGTCTGTT Shewmr7_0256 281091 - 280219 - | LysR family transcriptional regulator TERM 323 280406 - 280376 - G 79 -7.4 -4.46212 | opp_overlap 280378, overlap 280361 280377 280378 CCTGCCACCATAAAA TCGGGGGCGAGGGC GAG GCCTTGGCCCGCAA TCGCCGCCTCAATTG TERM 324 281421 - 281449 + G 100 -9.6 -5.71638 | TTCGGTCCACCTTTG GCGTGCCAAC ATAGGCTCG GTTGGCGCGC TTTTTTTAATTATTG TERM 325 281827 - 281843 + G 86 -5.1 -5.243 | GGATTGTTAGCCGTA GCACTAC TCA GTAATGC TTTTTTGCTGATTTA Shewmr7_0257 281212 - 282132 + | hypothetical protein TERM 326 282147 - 282115 - T 71 -9.1 -3.34233 | opp_overlap 282114 282116, overlap 282116 CTAGAAGCGGTAGAA GGCGAGCCTAAACCC TAA GGGCTTAGGCTCAAT CGGTTATTCGATGTA TERM 327 282146 - 282116 - T 88 -12.6 -2.60219 | opp_overlap 282116 282114, overlap 282115 TAGAAGCGGTAGAAG GCGAGCCTAAACCC TAA GGGCTTAGGCTCAA TCGGTTATTCGATGT Shewmr7_0258 282717 - 282151 - | transport-associated Shewmr7_0259 283307 - 282714 - | phosphoheptose isomerase Shewmr7_0260 283740 - 283414 - | hypothetical protein Shewmr7_0261 285623 - 283737 - | LppC family lipoprotein TERM 328 284203 - 284219 + g 80 -10.9 -3.76402 | opp_overlap 284191 284206, overlap 284206 AAATCGGCCTGTACC GAACTGC CTA GCAGTTC TTTGATACGTGCGAT TERM 329 284257 - 284278 + g 73 -5.9 -4.46656 | gap 1, overlap 284261 TGGCTATCGCGGACT CCG-AGTGCA TCC TGCACTGTGG TTTTCATCTTATCGC TERM 330 286176 - 286189 + G 78 -2.3 -5.28176 | opp_overlap 286174 CGAGCTCAAGGAAGA TCCGC GTAC GCTGA TTTTTTATGAATCAC Shewmr7_0262 285712 - 286557 + | hypothetical protein TERM 331 287025 - 286999 - T 100 -9.4 -4.78764 | opp_overlap 286999 TAAATTCAGTAAAAA GCCCGTTTATCT TTT AGGTAATCGGGC TTTTTATTTGGGCTA TERM 332 286999 - 287025 + T 100 -11.6 -5.28942 | opp_overlap 286999 TAAATTCAGTAAAAA GCCCGTTTATCT TTT AGGTAATCGGGC TTTTTATTTGGGCTA Shewmr7_0263 287507 - 287058 - | hypothetical protein TERM 333 287435 - 287409 - G 71 -6.5 -4.15222 | overlap 287411 AGTCGCGCCAATAAA GAGTCGCATCG CATCT CGATTCGACGC AATATACTGTTGCAG Shewmr7_0264 288203 - 287538 - | cytoplasmic chaperone TorD family protein TERM 334 288222 - 288261 + r 91 -12.2 -3.43217 | gap 1, opp_overlap 288228 288232, overlap 288223 288232 TCTTCTCTTATCTCG ACGGAACCAATGAGGGGCG CCA TGCCCCTCATTAGT-CCGA TTACTTAAATTTCAG TERM 335 288223 - 288260 + r 100 -15.7 -2.65448 | gap 1, opp_overlap 288228 288232, overlap 288222 288232 CTTCTCTTATCTCGA CGGAACCAATGAGGGGCG CCA TGCCCCTCATTAGT-CCG ATTACTTAAATTTCA TERM 336 288256 - 288228 - R 100 -15.4 -3.06183 | opp_overlap 288223 288222 288232, overlap 288232 CTTATCTCGACGGAA CCAATGAGGGGC GCCAT GCCCCTCATTAG TCCGATTACTTAAAT TERM 337 288232 - 288252 + r 100 -13.3 -3.19425 | opp_overlap 288228 288232, overlap 288223 288222 TCTCGACGGAACCAA TGAGGGGCG CCA TGCCCCTCA TTAGTCCGATTACTT TERM 338 288252 - 288232 - R 95 -12.6 -3.37344 | opp_overlap 288232 288223 288222, overlap 288228 TCTCGACGGAACCAA TGAGGGGC GCCAT GCCCCTCA TTAGTCCGATTACTT Shewmr7_0265 288925 - 288266 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 339 288793 - 288812 + g 76 -12.2 -2.90813 | opp_overlap 288790, overlap 288789 GCACCCCAGGAAGAT TGGCAACG CTAC CGTTGCCA TCATTTGCACGGATA Shewmr7_0266 291455 - 288939 - | anaerobic dimethyl sulfoxide reductase subunit A Shewmr7_0267 293478 - 291475 - | outer membrane protein TERM 340 292754 - 292768 + g 70 -10 -3.30159 | TGATTAATGTGATTG CGGTAG TAA CTACCG TTATAGGCCAGTTCA Shewmr7_0268 294437 - 293493 - | cytochrome C family protein TERM 341 294300 - 294314 + g 80 -2.8 -5.22006 | opp_overlap 294300 ACCTTTGGCTGAATA TTGACC TGC GGTAAA TTTTTGTTCTAATAG TERM 342 294893 - 294937 + r 100 -13.4 -3.06162 | gap 1, opp_overlap 294926 GTGCTCTTTGTATTT TCCTAATTAAAATGATTCATC ATAA GGT-AATCATTTTAATTAGGA TATTAAAATACGCTC TERM 343 294965 - 294949 - R 70 -9.5 -2.86603 | overlap 294948 AGGATATTAAAATAC GCTCAAT GCT ATTGAGC TGCTGACTGGGTGCT Shewmr7_0269 295451 - 294957 - | hypothetical protein TERM 344 295591 - 295558 - R 76 -8.1 -4.20516 | overlap 295560 TGGTCATCGAACAAA GACACCTTCAAGGTC ATTT GGCCTTGAAGGTGAG AGAGCTAGAACTGAA TERM 345 295589 - 295560 - R 100 -15.1 -3.70307 | overlap 295558 GTCATCGAACAAAGA CACCTTCAAGGTC ATTT GGCCTTGAAGGTG AGAGAGCTAGAACTG Shewmr7_0270 297896 - 295596 - | TonB-dependent receptor TERM 346 297910 - 297929 + H 73 -5.8 -4.56914 | ACTACTAATCCTTGG TGATATGT TATA ACGTATCA TTTTGGTTTGAGTGA Shewmr7_0271 298099 - 298569 + | ferric uptake regulator family protein Shewmr7_0272 300258 - 298618 - | hypothetical protein TERM 347 298768 - 298737 - G 76 -7.2 -4.29508 | opp_overlap 298760, overlap 298738 AGCGAGAGGAATAAA TCCGCGCGCCAATA CCGA TACTGGCAAGCGGG CCGCTGACTTCGTTA TERM 348 298767 - 298738 - G 71 -10.7 -3.16982 | opp_overlap 298760, overlap 298737 GCGAGAGGAATAAAT CCGCGCGCCAATA CCGA TACTGGCAAGCGG GCCGCTGACTTCGTT TERM 349 300103 - 300085 - G 80 -3 -5.24129 | GCGGTGGATAAAAAA TGCGTCGG GAG CGGACTCA TCGAAAATCGGGTTG TERM 350 300422 - 300396 - R 75 -8.7 -3.61517 | gap 1 AGGTTGCTTTAAGAA TC-GGGCTGGAG TTGG CGCCAGCCCTGA GAGGAGATGTTACAG Shewmr7_0273 301652 - 300432 - | hypothetical protein TERM 351 300517 - 300507 - G 73 -3.2 -4.96106 | opp_overlap 300515 300516, overlap 300498 CATAAAGATCAAAAA GATC TGC GACC CAATATGGGATTGGT Shewmr7_0274 301808 - 302206 + | hypothetical protein TERM 352 304746 - 304735 - g 71 -5.8 -4.41348 | GGTCGTGGAAACAAA GCCT CTTC AGGC CGTCAGCACGCTAAG Shewmr7_0275 302419 - 304764 + | hypothetical protein TERM 353 304804 - 304778 - T 95 -5.2 -5.77853 | AACGGCGAAAAAAAA CCACTCCA GTAAACCTATT TGGAGTGG CGCAGAGATGATGGT Shewmr7_0276 306122 - 304968 - | porin TERM 354 305522 - 305535 + g 70 -2.3 -5.0538 | CAGAGTTGGTCATTT CGCTG CCGT CATCG TTTTTTAAGGTGACA Shewmr7_0277 307566 - 306247 - | putrescine transporter TERM 355 307531 - 307544 + g 70 -2.4 -4.96388 | opp_overlap 307531 GGTGATAATAGTTAA TTGG ACGACA CCAA TTTTATTTGCTGATT Shewmr7_0278 309814 - 307652 - | ornithine decarboxylase TERM 356 308352 - 308383 + g 72 -3.8 -4.8543 | gap 1, overlap 308338 GGGTCAACGAAATAT TGGC-CTTTTTCG TAACCGT CGAAGGAGTGCCA TTTTTGTCCGGGTTC Shewmr7_0279 310230 - 310126 - | hypothetical protein TERM 357 310568 - 310550 - H 75 -5.4 -4.83169 | overlap 310536 ATGCTTGCATAAAAA TGCAAATA AAG TATTTACA AAATCACTGGCGTGC Shewmr7_0280 310715 - 311263 + | PBP family phospholipid-binding protein Shewmr7_0281 311282 - 312040 + | AraC family transcriptional regulator Shewmr7_0282 313133 - 312087 - | porin Shewmr7_0283 314255 - 313290 - | formate dehydrogenase gamma subunit TERM 358 313842 - 313819 - G 100 -9.6 -4.8622 | gap 1 GGTTCTAACCAAAAA CGG-CCTGCGA TCA TCGCAAGTCCG GTGCCGATCAATAGT Shewmr7_0284 314897 - 314265 - | cytoplasmic chaperone TorD family protein Shewmr7_0285 315442 - 314894 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shewmr7_0286 317655 - 315454 - | twin-arginine translocation pathway signal TERM 359 317676 - 317690 + r 74 -6.4 -4.56736 | overlap 317677 TCACCCACCATTATT TGAACC TTA GGTTCG TTTTGATTATTGGCT Shewmr7_0287 319203 - 317767 - | disulphide bond formation protein DsbB TERM 360 319153 - 319127 - G 74 -2.3 -5.14698 | gap 1, overlap 319130 AAACCGAAAATAAAA CA-AGCAATACC AACG GGTAATGCCATG ATAATAATAGAAGCA TERM 361 319149 - 319130 - G 76 -6.4 -4.6313 | overlap 319127 CCGAAAATAAAACAA GCAATACC AACG GGTAATGC CATGATAATAATAGA Shewmr7_0288 320376 - 319414 - | LysR family transcriptional regulator Shewmr7_0289 320826 - 321176 + | hypothetical protein TERM 362 321301 - 321317 + F 72 -8 -3.79419 | overlap 321299 CACTATTGGTTAATT GCGCTA TATGC TAGCGC TGTTTTGTGAACCCA Shewmr7_0290 321337 - 322752 + | hypothetical protein Shewmr7_0291 322754 - 323791 + | acyltransferase 3 TERM 363 323800 - 323849 + F 71 -4.3 -4.75404 | gap 1, overlap 323801 323809 TTGGTAACGCCTCGT C-TGCATACGCAGGGGAATTAAGT TTA AATTTATTCCCCTGTGTTAGCGTG TTTTTCATCGAATTT TERM 364 323801 - 323847 + F 74 -8 -3.98658 | overlap 323800 323809 TGGTAACGCCTCGTC TGCATACGCAGGGGAATTAAGT TTA AATTTATTCCCCTGTGTTAGCG TGTTTTTCATCGAAT TERM 365 323809 - 323839 + F 74 -9.8 -3.12892 | overlap 323801 323800 CCTCGTCTGCATACG CAGGGGAATTAAGT TTA AATTTATTCCCCTG TGTTAGCGTGTTTTT Shewmr7_0292 323868 - 324482 + | hypothetical protein TERM 366 324535 - 324501 - T 100 -17.4 -4.54047 | opp_overlap 324506, overlap 324506 TCATCGGAGATAAAA GAAAACCTCCTATTCC TGT GGAATAGGAGGTTTTT TAATGGGGACGACAT TERM 367 324530 - 324506 - T 100 -17.3 -5.23292 | opp_overlap 324506, overlap 324501 GGAGATAAAAGAAAA CCTCCTATTCC TGT GGAATAGGAGG TTTTTTAATGGGGAC TERM 368 324506 - 324530 + T 100 -17.3 -5.14563 | opp_overlap 324506 324501 GGAGATAAAAGAAAA CCTCCTATTCC TGT GGAATAGGAGG TTTTTTAATGGGGAC Shewmr7_0293 325142 - 324561 - | hypothetical protein Shewmr7_0294 326213 - 325281 - | hypothetical protein TERM 369 325806 - 325824 + g 73 -3.1 -5.00642 | ATATTTAAAAAATTC CGCCT GAAACCAAA AGGCG TTTTTATGTAAATTC Shewmr7_0295 326670 - 326269 - | hypothetical protein Shewmr7_0296 327134 - 326775 - | DsrE family protein TERM 370 326873 - 326890 + g 74 -8.3 -4.09685 | TTTCGGGGTTAACGC CCCGCGC TTGG GCGCAGG TTTTACAGAGTAAAA TERM 371 327026 - 327015 - G 70 -3 -4.80882 | ATCCGACATTAAAAA GATT TTTA AATC AACCTGTTGCTCTGT Shewmr7_0297 327387 - 328304 + | hypothetical protein TERM 372 328446 - 328461 + F 100 -9 -5.626 | opp_overlap 328445 328446 CTTACCGCGCAAAAG GCGAAC TAAG GTTCGC TTTTTTTATGGGCTA Shewmr7_0298 328482 - 328832 + | hypothetical protein TERM 373 329673 - 329683 + G 70 -8.2 -3.72576 | opp_overlap 329673 329672 ATTCCGACCCAGAAG GGCG TTA CGCC TTTGGTCAGCAGCCC Shewmr7_0299 328844 - 330298 + | hypothetical protein Shewmr7_0300 330298 - 330603 + | hypothetical protein Shewmr7_0301 330614 - 331651 + | serine/threonine protein kinase Shewmr7_0302 331779 - 332390 + | DSBA oxidoreductase TERM 374 332464 - 332478 + F 95 -7.1 -5.4505 | opp_overlap 332464 TGATATAAACTTAAA GGAGC CTAGC GCTCC TTTTTTATTGGCGAG TERM 375 332478 - 332464 - f 72 -7.1 -3.91402 | opp_overlap 332464 TGATATAAACTTAAA GGAGC CTAGC GCTCC TTTTTTATTGGCGAG TERM 376 332597 - 332571 - f 100 -7.4 -6.06723 | gap 1 TTTGGCAAAAAAAAA CCGTACT-TCC GATGAT GGAGAGTACGG ACTTGAGCCATATGA TERM 377 333006 - 332985 - g 83 -5.1 -5.07486 | opp_overlap 332985 TATTGCCAAGAAAAA GCCTGCC GAAAGTAA AGCAGGC TATCTTAGAGCTGAA Shewmr7_0303 332852 - 333064 + | hypothetical protein Shewmr7_0304 333282 - 333061 - | hypothetical protein Shewmr7_0305 333462 - 334967 + | Na+/H+ antiporter NhaC Shewmr7_0306 335024 - 335380 + | endoribonuclease L-PSP TERM 378 335435 - 335402 - T 80 -10.5 -3.40788 | gap 1, opp_overlap 335410, overlap 335405 335410 ATCTAATCTAAGTAA GC-AGTAAAGCTAAGT CGA ACTTGGCTTTACTCGC CCTCAACCATTGCTG TERM 379 335431 - 335405 - T 77 -11 -2.85784 | opp_overlap 335410, overlap 335402 335410 TAATCTAAGTAAGCA GTAAAGCTAAGT CGA ACTTGGCTTTAC TCGCCCTCAACCATT Shewmr7_0308 336117 - 335851 - | transcriptional antiterminator, Rof Shewmr7_0309 336146 - 337003 + | hypothetical protein TERM 380 337459 - 337435 - g 76 -2.7 -5.1356 | CCGTATCAACAAAAA CGCCGAGCG TATGAAT CGTTCTGCG GATATTGTCTGTATT Shewmr7_0310 337160 - 338251 + | branched-chain amino acid aminotransferase TERM 381 338295 - 338273 - T 86 -12.1 -3.19936 | opp_overlap 338273, overlap 338276 AATGATTCAATGCAA TAAGGCTCC TTGAG GGAGCCTTA TTTTTTTATCTGGTT TERM 382 338273 - 338295 + T 100 -12.8 -5.75478 | opp_overlap 338273 338276 AATGATTCAATGCAA TAAGGCTCCT TGA GGGAGCCTTA TTTTTTTATCTGGTT TERM 383 338292 - 338276 - T 78 -9.4 -3.73783 | opp_overlap 338273, overlap 338273 GATTCAATGCAATAA GGCTCC TTGAG GGAGCC TTATTTTTTTATCTG Shewmr7_0311 342825 - 338311 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 384 339025 - 339007 - G 72 -3.9 -4.87133 | gap 1 ATTGCGTAAACAAAA CTTGG-GT TGAT ACACCAAG CTTAACTCGTTGCGT TERM 385 341976 - 341966 - G 70 -8.2 -3.76492 | TGTAACTGGATCAAA CCCG CAT CGGG TCCAACTACCCAAAA TERM 386 343081 - 343052 - R 93 -2.9 -6.01187 | overlap 343054 AACGAAATAAAAAAA GACCTTGCC GGAAGGGGGAGA AGCAAGGTC TTTGGTTGAACGCTT Shewmr7_0312 344298 - 343105 - | methylitaconate delta2-delta3-isomerase TERM 387 343397 - 343407 + g 76 -8.2 -4.14739 | AGATCGATCTCCTCT GCCG CTA CGGC TTTTCCACTGGATGA TERM 388 343990 - 344016 + g 70 -11 -2.70932 | opp_overlap 343998, overlap 343994 GCCGCAGTTACCGCT CCAATCGACAAA AGG TTTGTCGATTGA TACTTGGCCAAAAAG TERM 389 343994 - 344012 + g 73 -10.4 -3.27298 | opp_overlap 343998, overlap 343990 CAGTTACCGCTCCAA TCGACAAA AGG TTTGTCGA TTGATACTTGGCCAA TERM 390 344380 - 344353 - R 100 -12.7 -3.57144 | opp_overlap 344345 344352 344351 TGCGTCAGTCGTAAA GGCGGCGTCTT TGTCTC AAGTCGCCGCC CCTTGTGCGAGTGTT Shewmr7_0313 347003 - 344412 - | aconitate hydratase TERM 391 347118 - 347145 + r 86 -10.6 -3.83318 | gap 1, opp_overlap 347112 347111, overlap 347119 CCTAAAGAGCTCATG C-GGAACTGACGC TTA GCGCCAGTTCCTG TTGTGTTATTAACGC TERM 392 347119 - 347143 + r 100 -14.3 -3.49835 | opp_overlap 347112 347111, overlap 347118 CTAAAGAGCTCATGC GGAACTGACGC TTA GCGCCAGTTCC TGTTGTGTTATTAAC Shewmr7_0314 348281 - 347154 - | methylcitrate synthase prpB 349393 - 348515 - | 2-methylisocitrate lyase TERM 393 349458 - 349479 + r 73 -5.9 -4.41348 | TTATGGGCCGCAACG CCTTAGTTA ATAT TGGCTAAGG TTTCTTTCGCGGCGG Shewmr7_0316 350248 - 349460 - | GntR family transcriptional regulator TERM 394 349970 - 349986 + g 82 -10.9 -3.95219 | CACATGGGGCGCGCG GACAACG AGA CGTTGTC TTTCTAAGGTTTGCA Shewmr7_0317 350580 - 351053 + | hypothetical protein TERM 395 351068 - 351045 - T 100 -14.6 -2.72344 | CTTGAGGCGGAATCA GCGGGCTAGG TAAG CCTAACCCGC TATCGACTCACCTAT Shewmr7_0318 352026 - 351085 - | phospholipid/glycerol acyltransferase Shewmr7_0319 352936 - 352034 - | phospholipid/glycerol acyltransferase Shewmr7_0320 354828 - 353302 - | Mg chelatase, subunit ChlI TERM 396 353488 - 353517 + g 70 -4.2 -4.67123 | opp_overlap 353485, overlap 353492 CTGTTCTAAAAAGCC TAAGTCGGCGTC GCTAAG GCCGCCGAATTG TTTTAGTTGTTTTCC TERM 397 354504 - 354520 + g 76 -5.8 -4.60487 | CCGAGAGCGCGAGCT CGCCGA CAAAT TCGGTG TTTTTAAGGCTGCTG TERM 398 354916 - 354941 + H 100 -20.5 -3.37245 | opp_overlap 354903 CACTGGCTCGCTGTC CGCCAGAGCCG CAAG CGGCTCTGGCG TTAGTGTTAGCGTGA Shewmr7_0321 355041 - 356189 + | hypothetical protein Shewmr7_0322 356791 - 356195 - | two component LuxR family transcriptional regulator Shewmr7_0323 357870 - 356791 - | putative signal transduction histidine kinase TERM 399 357835 - 357808 - G 73 -5.7 -4.57353 | gap 1, opp_overlap 357808 CGGGATCAGATAAAA CGC-TAGGTTTA TCAGG TAAACCCATGCG ATTTTTTGTTCTATT TERM 400 357910 - 357936 + r 79 -8 -4.28254 | opp_overlap 357927 TGGCTACCTATGGCA GGATTGGCCG CAAACAT CAGCCAATCC TTTTGCCTGTTCAGG Shewmr7_0324 358658 - 357954 - | TPR repeat-containing protein TERM 401 358816 - 358786 - R 100 -17 -4.11216 | opp_overlap 358792, overlap 358787 358792 GTCTTAGGCCTAAAA GCAAAACACCGGAG AAG CTCCGGTGTTTTGT AAGGCAAGGTGCAGC TERM 402 358815 - 358787 - R 100 -20.5 -3.06515 | opp_overlap 358792, overlap 358786 358792 TCTTAGGCCTAAAAG CAAAACACCGGAG AAG CTCCGGTGTTTTG TAAGGCAAGGTGCAG TERM 403 358810 - 358792 - R 100 -14.6 -4.67038 | opp_overlap 358792, overlap 358787 358786 GGCCTAAAAGCAAAA CACCGGAG AAG CTCCGGTG TTTTGTAAGGCAAGG TERM 404 358792 - 358810 + r 100 -14.6 -4.36914 | opp_overlap 358787 358786 358792 GGCCTAAAAGCAAAA CACCGGAG AAG CTCCGGTG TTTTGTAAGGCAAGG Shewmr7_0325 359785 - 358835 - | CaCA family Na(+)/Ca(+) antiporter TERM 405 359900 - 359917 + r 75 -8.4 -3.84961 | opp_overlap 359900 ATATGTCATAAAAAA GCACGC CGAAGA GCGTGC TTTCATAGTTCAGTG TERM 406 359917 - 359900 - R 100 -9.1 -5.26918 | opp_overlap 359900 ATATGTCATAAAAAA GCACGCC GAAG AGCGTGC TTTCATAGTTCAGTG Shewmr7_0326 361609 - 359945 - | AMP-dependent synthetase and ligase TERM 407 361822 - 361809 - R 100 -9.5 -5.4833 | TTAGGCAATAAAAAA GGCGC CTAA GCGCC TCGTAAAATCGGTGG Shewmr7_0327 362225 - 361842 - | putative endoribonuclease L-PSP Shewmr7_0328 364350 - 362248 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 408 363298 - 363324 + g 75 -8.7 -3.86015 | overlap 363281 GGCACGCACTTGCGT GGTGGTGCC TTGACCATC GGCACCGCC TTTGTAAGCCCAGTG rpoZ 364672 - 364394 - | DNA-directed RNA polymerase subunit omega Shewmr7_0330 365405 - 364731 - | guanylate kinase TERM 409 364855 - 364843 - G 71 -7.7 -4.07687 | AGTGCTGTGTCAAAA TCGTC ATT GACGA TAATAAAATCATATT TERM 410 365831 - 365843 + G 72 -4.1 -4.87037 | overlap 365824 365823 ACTGGCTGTCGCCGC GTTTG GGG CGAAC TTTTTAATGTATCTT TERM 411 366439 - 366457 + G 70 -8.2 -3.65902 | overlap 366437 366454 TGGAGCAAACCCGCA TCGATATC GCC GATGTCGA TTTAGCTCAAGTCGA Shewmr7_0331 365727 - 367223 + | hypothetical protein Shewmr7_0332 367369 - 368250 + | hypothetical protein TERM 412 369125 - 369110 - g 73 -5.4 -4.67234 | gap 1, opp_overlap 369122 ACTGAAGTCGAAAAA CGTAGCC TCT GGCT-CG GGGCGCGGGTGATTT Shewmr7_0333 368234 - 369298 + | aminoglycoside phosphotransferase TERM 413 369343 - 369328 - f 100 -11.8 -3.90588 | opp_overlap 369328 CACGCCCTAATCAAA CGCCCC ATTT GGGGCG TTTTGTTTTTGGCTT TERM 414 369328 - 369343 + F 100 -11.8 -5.29885 | opp_overlap 369328 CACGCCCTAATCAAA CGCCCC ATTT GGGGCG TTTTGTTTTTGGCTT TERM 415 369789 - 369804 + G 70 -10.4 -2.98582 | overlap 369788 TATTTATCGCGCTCG CCGTGG GATA CCACGG GTTTATCAATCTTAT TERM 416 369864 - 369877 + G 74 -3.7 -5.00884 | overlap 369863 CTATCGTGCCCGAAC GTCGC CGTG GCGCC TTTTTTGCGGCGCGT Shewmr7_0334 369416 - 370840 + | twin-arginine translocation pathway signal Shewmr7_0335 371723 - 370860 - | hypothetical protein TERM 417 371836 - 371864 + H 74 -9.5 -3.29144 | CACAGGTTTTGGCAG CGCAAAGCTGGCG TTG CGTCGGTATTGCG TTGTAGAGGCAATCA TERM 418 371920 - 371948 + H 78 -5.3 -5.05782 | overlap 371936 371937 371938 AGCAGTTGGGCAAGG TGAGGCGATTACT TGC ATTATTTGCCTCA TTTTTTGAGGTAAAT TERM 419 372299 - 372274 - g 74 -3.9 -5.00616 | overlap 372275 372276 372295 TCCTTGGCTAAAAAA CTCGGTGTGTC CGAA GACAAACCGTA TCCGACCACGGCACA TERM 420 372415 - 372439 + G 85 -12.9 -3.71848 | overlap 372432 AAACAGTTATTTCCC CGGGGTTATAC GCT GTTTAACCCCG TTATTGGTGGAGCGC Shewmr7_0336 372028 - 373143 + | filamentation induced by cAMP protein Fic TERM 421 373420 - 373394 - g 76 -8 -4.2558 | CAGCTCGCATTAAAA GCTGACATGGAC AGA ACCTATGTCAGC GGCATTGAACGTGGT Shewmr7_0337 373304 - 373534 + | XRE family transcriptional regulator Shewmr7_0338 373531 - 375486 + | hypothetical protein TERM 422 375515 - 375496 - T 86 -7.8 -4.72007 | opp_overlap 375490 375487 375496 GTTTAGTAAAAGAAA GGGTCGGA ATTG TTCGACCC TTTGGGTTATTTTGA TERM 423 375496 - 375515 + T 86 -10 -3.92716 | opp_overlap 375496, overlap 375490 375487 GTTTAGTAAAAGAAA GGGTCGGA ATTG TTCGACCC TTTGGGTTATTTTGA Shewmr7_0339 375998 - 375522 - | hypothetical protein TERM 424 375553 - 375574 + g 90 -8.8 -4.68511 | opp_overlap 375553 375550 375557 AAACTAATAAATTCA TCAAGGTC GCTAAA GACCTTGA TTTGTTTGTCTTGAA Shewmr7_0340 376998 - 376102 - | LysR family transcriptional regulator TERM 425 376287 - 376333 + g 93 -14 -3.74526 | gap 2, opp_overlap 376301 TAAAGCGCGGTAGGT TAGCGATGCCAAGACCATCGAG ACAGG CTCGATGGA-T-GGCATCGCTA TTATTCACTTGATAG TERM 426 376321 - 376301 - G 74 -11.2 -3.06492 | opp_overlap 376287 TTAGCGATGCCAAGA CCATCGAG ACAGG CTCGATGG ATGGCATCGCTATTA Shewmr7_0341 377357 - 378073 + | nucleotidase TERM 427 378111 - 378085 - T 100 -12.4 -5.02074 | opp_overlap 378086 378091, overlap 378086 CTAGCCTCTAAAAAA CCAAAAGCCCTT TAA AAGGGCTTTTGT TTTTAGATCACACAA TERM 428 378086 - 378110 + T 100 -15.9 -4.65895 | opp_overlap 378085 378086, overlap 378091 TAGCCTCTAAAAAAC CAAAAGCCCTT TAA AAGGGCTTTTG TTTTTAGATCACACA TERM 429 378110 - 378086 - T 100 -15.9 -3.60762 | opp_overlap 378086 378091, overlap 378085 TAGCCTCTAAAAAAC CAAAAGCCCTT TAA AAGGGCTTTTG TTTTTAGATCACACA TERM 430 378091 - 378105 + T 100 -10 -5.2853 | opp_overlap 378086 378085, overlap 378086 TCTAAAAAACCAAAA GCCCTT TAA AAGGGC TTTTGTTTTTAGATC TERM 431 378185 - 378168 - T 74 -4.3 -4.93877 | GCTCATTAAATAAAA TATTAAA TATT TTTAATA TCAATCTCTTGTGGT TERM 432 378273 - 378292 + T 77 -5 -4.96848 | overlap 378269 CTTACTTGGATTGTG CTGAAAGA ACAT TCTGTCAG TTTTTATATCCCAGG Shewmr7_0342 381578 - 378375 - | hypothetical protein TERM 433 379708 - 379721 + g 78 -2.3 -5.252 | overlap 379706 GCGAGGTCTGCTGCT GCAAC AAGC GGTGC TTTTTTCTCGAAATC TERM 434 380423 - 380405 - G 71 -6.6 -4.19704 | overlap 380408 CAATGCTATCCAAAA GATCGAGC CCT GCTCGTCC CTGCAATATAAATAA TERM 435 381304 - 381317 + g 78 -2.4 -5.36441 | TGCACGTGGCCATTT TCAG TAGTAT CTGA TTTTTTATCTGAAGA Shewmr7_0343 383341 - 381575 - | hypothetical protein TERM 436 384212 - 384227 + H 70 -7.6 -3.72695 | GATTTAGCCGTGATA TTCCAC TTAT GTGGAA TTTGATGAGCAACAT Shewmr7_0345 384590 - 385012 + | hypothetical protein Shewmr7_0346 385664 - 387325 + | superfamily II helicase Shewmr7_0347 387382 - 387627 + | phage transcriptional regulator, AlpA TERM 437 387639 - 387662 + T 93 -8.8 -4.57755 | TTGAGTAAAGTTAGA GCCCTGTCCT GTGT AGGGTGGGGC TTTTATATCGTCAAT Shewmr7_0348 388579 - 387665 - | hypothetical protein Shewmr7_0349 389369 - 388584 - | hypothetical protein TERM 438 389392 - 389412 + r 70 -2.5 -4.92239 | overlap 389393 TATAAGAAATAAAAT ACACGTTGA TTA TTGACGTGA TTTTTAGATTTTTCA Shewmr7_0350 390756 - 389473 - | phage integrase family protein TERM 439 389764 - 389752 - G 73 -3.4 -5.04325 | TTCAAACGAGAAAAA GTTC TGTTC GAAC AACTTCTTCAGTGCA TERM 440 390774 - 390824 + r 70 -9.2 -2.79183 | gap 1, opp_overlap 390774 CTCGACCTCAAAAAA TTGGGGAGTACAATCTCGCT-TA ACTAAC TATAGCGAGAAAATACTCCCCAA TCTACTACCCATAAC TERM 441 390824 - 390774 - R 100 -12.1 -5.0538 | gap 1, opp_overlap 390774 CTCGACCTCAAAAAA TTGGGGAGTACAATCTCGCT-TAA CTAA CTATAGCGAGAAAATACTCCCCAA TCTACTACCCATAAC Shewmr7_0351 391805 - 390942 - | hypothetical protein Shewmr7_0352 392019 - 392732 + | RNAse PH TERM 442 392733 - 392778 + F 72 -9.3 -3.19602 | gap 1, opp_overlap 392749, overlap 392743 392749 GCTGCATTGAATTAA TTGTTGTTGATAAGAAGCCCCG TTA TGGGGCTTTTTATTAA-ATCAA TATTGCTATAACCCA TERM 443 392743 - 392769 + F 93 -12.4 -3.09987 | opp_overlap 392749, overlap 392733 392749 ATTAATTGTTGTTGA TAAGAAGCCCCG TTA TGGGGCTTTTTA TTAAATCAATATTGC TERM 444 392749 - 392763 + F 100 -9.2 -5.10461 | opp_overlap 392749, overlap 392743 392733 TGTTGTTGATAAGAA GCCCCG TTA TGGGGC TTTTTATTAAATCAA TERM 445 392763 - 392749 - f 75 -8.5 -3.78934 | opp_overlap 392749 392743 392733 TGTTGTTGATAAGAA GCCCC GTTAT GGGGC TTTTTATTAAATCAA TERM 446 392970 - 392980 + G 70 -3.2 -4.82901 | GGACGAGACCTTGCG CGTT TAG GACG TTTTTATGCGGCGGC pyrE 392829 - 393476 + | orotate phosphoribosyltransferase TERM 447 393514 - 393540 + T 100 -10.9 -5.626 | opp_overlap 393514 CCGCTAAAACAAAAA CGCTGCGATTC ATCAA GAATGGCAGCG TTTTTTTATGCACTG TERM 448 393540 - 393514 - T 100 -10.9 -5.45802 | opp_overlap 393514 CCGCTAAAACAAAAA CGCTGCGATTC ATCAA GAATGGCAGCG TTTTTTTATGCACTG folE 394221 - 393571 - | GTP cyclohydrolase I TERM 449 394430 - 394405 - R 91 -7.6 -4.87626 | opp_overlap 394405 GCTGAAGATGAAAAA GCCGATAGTC CTTATC GATTATCGGC TTCTTGGGGCGCTAG TERM 450 394405 - 394430 + r 80 -9.8 -3.62046 | opp_overlap 394405 GCTGAAGATGAAAAA GCCGATAGTC CTTATC GATTATCGGC TTCTTGGGGCGCTAG Shewmr7_0355 396449 - 394461 - | peptidase S9 prolyl oligopeptidase TERM 451 396206 - 396218 + g 83 -3.4 -5.37593 | opp_overlap 396206 TGCTCGGGAAGCGAA TTGC GTTAA GCAA TTTTTTGGTTTGGGC TERM 452 396550 - 396567 + r 100 -11.3 -4.19177 | opp_overlap 396550 AGGGGATAAAAGAAA GGACGGT GATT ACCGTCC TTTGTATTGAAAAAT TERM 453 396567 - 396550 - R 100 -11.3 -4.77775 | opp_overlap 396550 AGGGGATAAAAGAAA GGACGGT GATT ACCGTCC TTTGTATTGAAAAAT slmA 397178 - 396585 - | nucleoid occlusion protein dut 397666 - 397208 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Shewmr7_0358 398884 - 397667 - | phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase TERM 454 398048 - 398059 + g 80 -3 -5.25803 | AACCGCCGCGCAGCC GATA AAAA TATC TTTTTTATCAACATT Shewmr7_0359 399006 - 399683 + | DNA repair protein RadC TERM 455 399885 - 399874 - g 74 -2.2 -5.08824 | gap 1, opp_overlap 399874 399876, overlap 399876 TTCGCACGCAAAAAA CG-CG ACC CGTCG TCGTTTTTTACCTAA TERM 456 399876 - 399888 + G 80 -4.8 -5.09225 | opp_overlap 399874 399876, overlap 399874 CGCACGCAAAAAACG CGAC CCGTC GTCG TTTTTTACCTAACCT Shewmr7_0360 399806 - 400042 + | 50S ribosomal protein L28P rpmG 400049 - 400222 + | 50S ribosomal protein L33 TERM 457 400264 - 400247 - f 100 -11.3 -4.37092 | opp_overlap 400247 AGTGTTTCGAGAAAA GCCCCTT ATTT AAGGGGC TTTTTTTTGGTCTTT TERM 458 400247 - 400264 + F 100 -11.3 -5.9663 | opp_overlap 400247 AGTGTTTCGAGAAAA GCCCCTT ATTT AAGGGGC TTTTTTTTGGTCTTT TERM 459 401709 - 401722 + G 73 -5.9 -4.50159 | GGCCAGGCGCGTAAT CGGGG TTAT TCCCG TTTGTTTGCCTTGAC Shewmr7_0362 400527 - 401864 + | N-acetylglutamate synthase TERM 460 401885 - 401903 + F 100 -10.3 -5.08601 | opp_overlap 401883 401885 TTACGCTTGATAAGA TGCCAGC CTAGC GCTGGCA TTTTTGTTGACATAA TERM 461 401903 - 401885 - f 77 -10.3 -3.21924 | opp_overlap 401885, overlap 401883 TTACGCTTGATAAGA TGCCAGC CTAGC GCTGGCA TTTTTGTTGACATAA Shewmr7_0363 401968 - 402486 + | hypothetical protein TERM 462 402484 - 402516 + T 79 -6.6 -4.61231 | gap 2, opp_overlap 402484 402486 402487, overlap 402471 402487 AGCCAGCTACAAAAA TAGCTGGTTAAGTAGA TGC TC-ACTTAACCAG-TA TTTTTGCAACTGTCG TERM 463 402516 - 402484 - T 82 -6.6 -4.88067 | opp_overlap 402471 402484 402487, overlap 402486 402487 AGCCAGCTACAAAAA TAGCTGGTTAAGT-AG ATG CTCACTTAACCAG-TA TTTTTGCAACTGTCG TERM 464 402515 - 402486 - T 72 -7.3 -4.06182 | gap 1, opp_overlap 402471 402484 402487, overlap 402484 402487 CCAGCTACAAAAATA GCTGGTTAAGT-AG ATG CTCACTTAACCAGT ATTTTTGCAACTGTC TERM 465 402514 - 402487 - T 79 -10.8 -3.02986 | gap 1, opp_overlap 402471 402484 402487, overlap 402486 402484 CAGCTACAAAAATAG CTGGTTAAGT-AG ATG CTCACTTAACCAG TATTTTTGCAACTGT TERM 466 402487 - 402514 + T 90 -10.8 -3.91908 | gap 1, opp_overlap 402487 402486 402484, overlap 402471 402484 CAGCTACAAAAATAG CTGGTTAAGTAGA TGC TC-ACTTAACCAG TATTTTTGCAACTGT TERM 467 402536 - 402556 + T 100 -15.5 -4.39571 | overlap 402527 TGCAACTGTCGGTAG CGGCGTGAT CTC ATCACGCCG TTTTGCGTTTATAGG Shewmr7_0364 403433 - 402549 - | transporter DMT superfamily protein TERM 468 403336 - 403322 - G 86 -8.6 -4.67982 | CCCGATGCAATAAAA TTTCGG TCG CCGAAA CATGGTGGAGTAGTT TERM 469 403592 - 403556 - R 73 -5.2 -4.63592 | gap 1, opp_overlap 403559, overlap 403558 403559 GCTTAACAAAAAGAA GAGGGGAAACACC-TGA ATAA TCAAGGCGTTTCCCTTT AGCTTATCGATGGTG TERM 470 403590 - 403558 - R 74 -7.8 -3.91737 | gap 1, opp_overlap 403559, overlap 403556 403559 TTAACAAAAAGAAGA GGGGAAACACC-TGA ATAA TCAAGGCGTTTCCCT TTAGCTTATCGATGG TERM 471 403559 - 403589 + r 78 -9.1 -3.81339 | gap 1, opp_overlap 403558 403556 403559 TAACAAAAAGAAGAG GGGAAACACC-TGA ATAA TCAAGGCGTTTCCC TTTAGCTTATCGATG TERM 472 403589 - 403559 - R 83 -11.3 -2.93415 | gap 1, opp_overlap 403559, overlap 403558 403556 TAACAAAAAGAAGAG GGGAAACACC-TGA ATAA TCAAGGCGTTTCCC TTTAGCTTATCGATG Shewmr7_0365 404114 - 403650 - | hypothetical protein Shewmr7_0366 404391 - 406214 + | ATP-dependent DNA helicase RecQ Shewmr7_0367 407974 - 406196 - | tetratricopeptide domain-containing protein TERM 473 407296 - 407308 + g 79 -7.7 -4.55798 | CGGCGTTGCGCAGCA GTACG TGC CGTAC TTTTCCTTTAGCATC TERM 474 408407 - 408387 - H 100 -12.5 -3.96224 | opp_overlap 408387 CAAAGCATTCACAAA CCCCGCACC AAT GTTGCGGGG TTTTTTGTATCTGAA TERM 475 408387 - 408407 + H 100 -12.5 -5.4251 | opp_overlap 408387 CAAAGCATTCACAAA CCCCGCACC AAT GTTGCGGGG TTTTTTGTATCTGAA Shewmr7_0368 408471 - 410039 + | 2-isopropylmalate synthase Shewmr7_0369 410091 - 411185 + | 3-isopropylmalate dehydrogenase Shewmr7_0370 411185 - 412609 + | isopropylmalate isomerase large subunit Shewmr7_0371 412634 - 413239 + | isopropylmalate isomerase small subunit TERM 476 413283 - 413304 + F 100 -13.1 -5.20333 | opp_overlap 413283 TAAGTTAATCTTAAA CGCCTAGTT CGAA AACTAGGCG TTTTTGTTATCCATG TERM 477 413304 - 413283 - f 100 -13.1 -3.67864 | opp_overlap 413283 TAAGTTAATCTTAAA CGCCTAGTT CGAA AACTAGGCG TTTTTGTTATCCATG TERM 478 413523 - 413542 + F 71 -4.4 -4.79667 | gap 1, overlap 413522 413526 TGCATTTAAATATGC TC-AGCAAA TAC TTTGCTAGA TTTTTGCTGGATTTT TERM 479 414877 - 414866 - g 79 -7.2 -4.52589 | TGGCCTTAGACAAAA CGGC TGCG GCCG ATGAGTGGCGTACCA Shewmr7_0372 413767 - 415113 + | membrane protein involved in aromatic hydrocarbon degradation TERM 480 415134 - 415151 + F 100 -11.3 -5.28176 | opp_overlap 415134 TAGCTTGATGAAAAA GCCCTGA ATCT TCAGGGC TTTTTTGTGCCTAAA TERM 481 415151 - 415134 - f 100 -11.3 -4.72986 | opp_overlap 415134 TAGCTTGATGAAAAA GCCCTGA ATCT TCAGGGC TTTTTTGTGCCTAAA Shewmr7_0373 415302 - 416786 + | glycerol kinase Shewmr7_0374 417177 - 416857 - | hypothetical protein Shewmr7_0375 418353 - 417274 - | PepSY-associated TM helix domain-containing protein Shewmr7_0376 419057 - 418350 - | PepSY-associated TM helix Shewmr7_0377 419575 - 420033 + | cell division protein MraZ TERM 482 420665 - 420649 - g 70 -2.2 -4.92756 | opp_overlap 420661, overlap 420661 420664 ATCACTAAAAATAAA GAGCGT AACAA ACACCC TGCAACTCGGGTGTT mraW 420064 - 421005 + | S-adenosyl-methyltransferase MraW Shewmr7_0379 421018 - 421332 + | cell division protein FtsL Shewmr7_0380 421346 - 423097 + | peptidoglycan synthetase FtsI TERM 483 423182 - 423198 + G 73 -5.1 -4.60041 | opp_overlap 423173 423184, overlap 423171 423184 TAGATAGCCGCGCAA TACGTCG CGG CGATGTG TTTTTAGCGCTGCCT TERM 484 423371 - 423385 + G 70 -11.4 -2.60555 | opp_overlap 423363, overlap 423369 423368 TAGCTAAGCAAGTGT CTGCGG TCG CCGCAG TGCGTTATCCCGTTG Shewmr7_0381 423094 - 424575 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Shewmr7_0382 424572 - 425954 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 485 426463 - 426479 + G 74 -8 -4.06384 | opp_overlap 426455, overlap 426460 TTAAGGACGTGATGC CACAGC TTGGC GCTGTG TTTATCGTATTGGCG Shewmr7_0383 425955 - 427037 + | phospho-N-acetylmuramoyl-pentapeptide-transferase Shewmr7_0384 427044 - 428363 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase Shewmr7_0385 428353 - 429564 + | cell division protein FtsW TERM 486 430034 - 430013 - g 71 -5.1 -4.56597 | overlap 430015 GTGCGCCTTTAAAAA TACCTTCAC TCAG GTGAAGGCC AAGGTAGTGGGTAAC TERM 487 430032 - 430015 - g 78 -9.9 -3.90048 | overlap 430013 GCGCCTTTAAAAATA CCTTCAC TCAG GTGAAGG CCAAGGTAGTGGGTA Shewmr7_0386 429564 - 430652 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Shewmr7_0387 430655 - 432121 + | UDP-N-acetylmuramate--L-alanine ligase TERM 488 432922 - 432880 - g 71 -6.5 -4.1347 | gap 1 TGGCAAGGATACAAA GGTTTATCACTGTTTACCCA TTAC TGGCGAAACAA-GATAAACC GATTGCCAGAGTGGA Shewmr7_0388 432273 - 433022 + | polypeptide-transport-associated domain-containing protein Shewmr7_0389 433003 - 434238 + | cell division protein FtsA Shewmr7_0390 434266 - 435453 + | cell division protein FtsZ TERM 489 435515 - 435571 + F 82 -8.2 -4.26344 | gap 1, opp_overlap 435534, overlap 435516 GGCAATACCATCCAA TGACTACATTTGTATGACATGGTCAAC TTAT GTT-ACCATGTCGAACCTATGTGGTCG TTTTGCTGCCGCTGT TERM 490 435516 - 435570 + F 72 -9.5 -3.15324 | gap 1, opp_overlap 435534, overlap 435515 GCAATACCATCCAAT GACTACATTTGTATGACATGGTCAAC TTAT GTT-ACCATGTCGAACCTATGTGGTC GTTTTGCTGCCGCTG lpxC 435634 - 436554 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 491 436578 - 436600 + T 100 -19.2 -4.77757 | GATCTTTACTTATTA CGGCTGGCCA ATG TGGCCAGCCG TTTTAGTTTTTCGCC Shewmr7_0392 437014 - 436568 - | hypothetical protein Shewmr7_0393 437042 - 437941 + | peptidase M23B TERM 492 440045 - 440035 - g 70 -3.2 -4.79826 | opp_overlap 440035 AGACACCATCAAAAA CATC CAA GACG ATGTGATTAGTGCGG Shewmr7_0394 438002 - 440728 + | preprotein translocase subunit SecA TERM 493 440772 - 440754 - f 91 -10.3 -4.15453 | opp_overlap 440754 GAACTCATTTTAAAA GGCGACT GTAAT AGTCGCC TTTTTCATAACTGCT TERM 494 440754 - 440772 + F 100 -11 -4.75372 | opp_overlap 440754 GAACTCATTTTAAAA GGCGACTG TAA TAGTCGCC TTTTTCATAACTGCT TERM 495 441152 - 441126 - f 81 -7.2 -4.66609 | overlap 441128 TACTTGACGCAAAAA CGGGAATGCGTA AAA TACGCAGCCCTG ACCCGCTGAAATCAC TERM 496 441274 - 441252 - f 70 -7.1 -3.76952 | gap 1 TTGAGTTAATCGAAA TTACTCTGCC GTTT GGC-GAGTAA TCAAAGAATTAAATC TERM 497 443310 - 443340 + F 100 -8.5 -5.00884 | opp_overlap 443309 AATCTGGTTAGAGAT GCCAAAGATAA ACTGAAAAA TTATCTTTGGC TTTTTTAAGCCCGCT TERM 498 443465 - 443425 - f 84 -2.7 -5.63374 | opp_overlap 443432 443437 443439 443444, overlap 443439 TTAATACGAAAAAAA TTGAGTTCTTAAAACACTT TTT AAGTGTCTTGAATATTCAA GTCTAAGGCGAGTCC TERM 499 444045 - 444033 - f 83 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 500 444843 - 444827 - f 85 -9.4 -4.08546 | overlap 444840 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 501 445297 - 445325 + F 72 -8.1 -3.85698 | TCCCTAAGCTGACGG CAGTCGCAGATAC CAG GTGGCTGCAACTG TTTATCAAAAACACA TERM 502 446511 - 446499 - f 72 -6.3 -4.2586 | TTAGACGAATAGAAA CACTT AAG AAGTG CAACTCAAACCAGCT Shewmr7_0395 446931 - 447059 + | hypothetical protein TERM 503 447083 - 447064 - T 100 -13.6 -4.39696 | opp_overlap 447064 CGCTAAATTAAGAAA GGCCACCT GATT AGGTGGCC TTTTTGCTTTTCTAA TERM 504 447064 - 447083 + T 100 -13.6 -5.1417 | opp_overlap 447064 CGCTAAATTAAGAAA GGCCACCT GATT AGGTGGCC TTTTTGCTTTTCTAA TERM 505 447809 - 447778 - T 82 -10.2 -3.60627 | overlap 447788 447801 GCAGTTGATTCGAAA GCGCCAAGAAGTTT GTAA AAACGCCTTGACGC GACAAGGGAAATGCG TERM 506 447835 - 447821 - T 75 -8.6 -3.80893 | ACGCGACAAGGGAAA TGCGTA GAA TACGCA GCCCTGACCCGCTGA TERM 507 447962 - 447940 - T 70 -7.1 -3.76952 | gap 1 TTGAGTTAATCGAAA TTACTCTGCC GTTT GGC-GAGTAA TCAAAATTTAAATCA TERM 508 449869 - 449829 - T 84 -2.7 -5.63374 | opp_overlap 449836 449841 449843 449848, overlap 449843 TTAATACGAAAAAAA TTGAGTTCTTAAAACACTT TTT AAGTGTCTTGAATATTCAA GTCTAAGGCGAGTCC TERM 509 450444 - 450432 - T 83 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 510 451242 - 451226 - T 85 -9.4 -4.08546 | overlap 451239 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 511 451696 - 451724 + T 72 -8.1 -3.85698 | TCCCTAAGCTGACGG CAGTCGCAGATAC CAG GTGGCTGCAACTG TTTATCAAAAACACA TERM 512 452910 - 452898 - T 72 -6.3 -4.2586 | TTAGACGAATACAAA CACTT AAG AAGTG GCACTCAATACAGCT TERM 513 453200 - 453232 + T 100 -11.4 -4.72486 | opp_overlap 453203 453207, overlap 453207 CAAGCGCCTAATTAA CAATGAAGCCAGCT GAACA AGCTGGCTTTTTTG TTTTTCGCGTTTGTC TERM 514 453207 - 453225 + T 100 -10.3 -5.93252 | opp_overlap 453203 453207, overlap 453200 CTAATTAACAATGAA GCCAGCT GAACA AGCTGGC TTTTTTGTTTTTCGC TERM 515 453225 - 453207 - T 82 -10.3 -3.58329 | opp_overlap 453207 453200, overlap 453203 CTAATTAACAATGAA GCCAGCT GAACA AGCTGGC TTTTTTGTTTTTCGC TERM 516 453366 - 453384 + T 100 -11.7 -4.06562 | opp_overlap 453366 TCGGGACAATGAAAA GGGCAGC GTATG GCTGCCC TTTATGCTTAGAATT TERM 517 453384 - 453366 - T 100 -11.7 -4.48987 | opp_overlap 453366 TCGGGACAATGAAAA GGGCAGC GTATG GCTGCCC TTTATGCTTAGAATT Shewmr7_0396 454425 - 453415 - | delta-aminolevulinic acid dehydratase Shewmr7_0397 456312 - 454435 - | diguanylate cyclase Shewmr7_0398 457108 - 456305 - | Sec-independent protein translocase TatD TERM 518 456532 - 456554 + g 71 -11.2 -2.84602 | opp_overlap 456525 456524 456532, overlap 456531 GAATAAATGGAACCA GCTCGGCTAG CTC CTGGCCGCGC CTTTCATCACATACC Shewmr7_0399 457632 - 457108 - | hypothetical protein Shewmr7_0400 458425 - 457676 - | Sec-independent protein translocase TatC TERM 519 458093 - 458081 - G 76 -7.7 -4.41494 | TATTCCTAAGTAAAA CAGCA CTG TGCTG CTAAAGAGTAGCGGC Shewmr7_0401 458871 - 458428 - | twin-arginine translocation protein, TatB subunit Shewmr7_0402 459135 - 458878 - | twin arginine-targeting protein translocase Shewmr7_0403 460844 - 459195 - | 2-octaprenylphenol hydroxylase TERM 520 459399 - 459416 + g 70 -8.5 -3.78312 | opp_overlap 459413 CTTATCTAGCATTTG TTGCTGA GAAC TCAGCAA TTTCCTGCCTAATTT Shewmr7_0404 461461 - 460841 - | hypothetical protein TERM 521 461365 - 461389 + g 77 -12.2 -3.13475 | gap 1, opp_overlap 461364 461360 TGCCATGTAACTGAC GCTGGCGA-GC ATAG GCGTCGCCAGC TTGGGTCTGAAGTTG Shewmr7_0405 462216 - 461461 - | demethylmenaquinone methyltransferase TERM 522 462082 - 462071 - G 73 -5.8 -4.58283 | TAACGCTTCCAAAAA CGGT GAAT ACCG AAGGACATAACGTCA TERM 523 462320 - 462344 + r 73 -8.5 -3.6715 | opp_overlap 462319 TCGAGTTAGTAAACT CTCCTCAAGGC GTT GGCTTGAGGCG TTTGGCATTCGCTAA TERM 524 462449 - 462425 - R 86 -12.2 -3.0263 | gap 1, opp_overlap 462419 AGGATTTGGTGAATA GCTTAGCGCCC ACAA GGGCGC-AAGC TTAACATGCTATTGA Shewmr7_0406 463510 - 462458 - | arginase/agmatinase/formiminoglutamase TERM 525 463619 - 463605 - R 100 -11.4 -5.49234 | opp_overlap 463605 ACAGCCAATAAAAAA GCCAGC TTA GCTGGC TTTCTTGTCGTGTTA TERM 526 463605 - 463619 + r 100 -11.4 -4.39277 | opp_overlap 463605 ACAGCCAATAAAAAA GCCAGC TTA GCTGGC TTTCTTGTCGTGTTA Shewmr7_0407 464127 - 463642 - | ribonuclease activity regulator protein RraA Shewmr7_0408 464446 - 464700 + | hypothetical protein TERM 527 465044 - 465025 - f 72 -10 -2.79679 | opp_overlap 465021 465018 AACATCGCCATGATA CTCGCTGG CACG CCAGCAAG GAGCCTGTTTTATGT Shewmr7_0409 465056 - 465568 + | phosphoesterase, PA-phosphatase related Shewmr7_0410 465642 - 466682 + | hypothetical protein TERM 528 466844 - 466858 + G 76 -4.3 -4.93316 | CTTAAGAAGTTTACT CAGTA CAAGT TACTG TTTTTAATGTTGTTG TERM 529 468387 - 468415 + G 75 -12.5 -2.53911 | opp_overlap 468387 AACCTAATGAACCAA CTCAGCCTCAATC TAA GGTTGAGACTGAG TAACTTAGGAATTGC TERM 530 468415 - 468387 - g 82 -12.5 -3.46482 | opp_overlap 468387 AACCTAATGAACCAA CTCAGCCTCAATC TAA GGTTGAGACTGAG TAACTTAGGAATTGC Shewmr7_0411 466823 - 468418 + | hypothetical protein Shewmr7_0412 469066 - 468455 - | DedA family protein TERM 531 469214 - 469183 - R 93 -14 -2.53759 | gap 1, opp_overlap 469184 469190, overlap 469190 AACATTTTTAAGGCA CA-AAAAAGCCGAAC TGA GTTCGGCTTTTTATG TATGACAACTTAATG TERM 532 469184 - 469212 + r 93 -13.3 -2.88579 | opp_overlap 469183 469190, overlap 469190 ACATTTTTAAGGCAC AAAAAAGCCGAAC TGA GTTCGGCTTTTTA TGTATGACAACTTAA TERM 533 469206 - 469190 - R 100 -12.3 -5.31456 | opp_overlap 469184 469190, overlap 469183 TTAAGGCACAAAAAA GCCGAAC TGA GTTCGGC TTTTTATGTATGACA TERM 534 469190 - 469206 + r 100 -12.3 -5.03994 | opp_overlap 469190 469183, overlap 469184 TTAAGGCACAAAAAA GCCGAAC TGA GTTCGGC TTTTTATGTATGACA Shewmr7_0413 470155 - 469235 - | putative manganese-dependent inorganic pyrophosphatase TERM 535 469962 - 469974 + g 90 -9.1 -4.73682 | ATGTAGACCTGCTCG CCAGC ATA GCTGG TTTTATATTCTGGCG TERM 536 470283 - 470265 - R 75 -3 -5.15634 | opp_overlap 470266 470272, overlap 470266 TATTCCACTAAAAAA CGACCGCT GGC AGTGGCCA TTATTCACATCGGTG Shewmr7_0414 470760 - 470299 - | hypothetical protein TERM 537 470853 - 470870 + r 100 -11.3 -4.40993 | opp_overlap 470853 ATAGACATAAAAAAA CAGGCCA TAAA TGGCCTG TTTTGATGGTTTGTG TERM 538 470870 - 470853 - R 100 -11.3 -5.77988 | opp_overlap 470853 ATAGACATAAAAAAA CAGGCCA TAAA TGGCCTG TTTTGATGGTTTGTG Shewmr7_0415 473326 - 470888 - | TonB-dependent receptor Shewmr7_0416 473588 - 474643 + | hypothetical protein Shewmr7_0417 474788 - 475363 + | ATP-dependent protease La TERM 539 475406 - 475385 - f 73 -7.3 -4.13945 | opp_overlap 475385 475384 475387 ACTCCGAGGCTAAAA TAGCGGC TCATTATC GCCGCTA GTTGTTTCTATGACT Shewmr7_0418 475416 - 476342 + | pseudouridine synthase TERM 540 477283 - 477299 + G 71 -6.5 -4.2349 | opp_overlap 477283 ATAGATACCGAGCAA CAGAGCA GTT TGCACTG TTTTAACTGTGGGCA Shewmr7_0419 476641 - 478029 + | hypothetical protein TERM 541 478080 - 478094 + G 70 -2.8 -4.75174 | ATCTGGCACCAATTG GCTGAA CAC TTAAGC TTTTTCGCTTGGCTG Shewmr7_0420 478026 - 479354 + | glycosyl transferase family protein TERM 542 479854 - 479843 - g 74 -7.2 -4.21194 | CGTTACCAGCGAAAA GGGG TTGT CCCC ACTGCGGATATGGCG Shewmr7_0421 479354 - 480409 + | hypothetical protein TERM 543 480436 - 480473 + F 86 -12 -3.03771 | opp_overlap 480441, overlap 480441 AGGCTAATGTCTTGA GGCAATGCCGCCCTCA ATAGCG TGAGAGCGGCGTTGGC TGTTAACGGGTGTAC Shewmr7_0422 480615 - 480977 + | hypothetical protein Shewmr7_0423 482826 - 480979 - | hypothetical protein Shewmr7_0424 483007 - 483927 + | dTDP-4-dehydrorhamnose reductase TERM 544 484758 - 484740 - g 71 -5.9 -4.37886 | TCAGCGGCCACAAAA GGTCACC GAGCT GGTGGCC GGATTAAAGCAGAAA Shewmr7_0425 483931 - 485220 + | periplasmic sensor signal transduction histidine kinase Shewmr7_0426 485217 - 485768 + | response regulator receiver protein Shewmr7_0427 485800 - 486276 + | hypothetical protein Shewmr7_0428 487127 - 486417 - | C factor cell-cell signaling protein Shewmr7_0429 488730 - 487153 - | deoxyribodipyrimidine photolyase-related protein TERM 545 488932 - 488910 - R 72 -7.6 -3.87583 | overlap 488904 AAAGTCAAAGTCAAA GTCGTGGGGC TTC ACCCCACACC CGACCAAGGAGGACT TERM 546 489146 - 489157 + r 75 -5.8 -4.67982 | opp_overlap 489133 GAGAACGACCATACC TCGC TCAC GCGA TTTTCTTCAATGCCA Shewmr7_0430 490941 - 489220 - | NACHT family-like NTPase TERM 547 491320 - 491342 + r 70 -7.6 -3.66178 | ATCCCCTCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTAAACTTAAAAAG TERM 548 491426 - 491409 - R 70 -9.9 -2.51259 | opp_overlap 491409, overlap 491408 491407 TACTCACAATAAACC CGCAATC ATTC GATTGCG TTAACTAATCCCGTT TERM 549 491409 - 491426 + r 74 -9.9 -3.10012 | opp_overlap 491408 491407 491409 TACTCACAATAAACC CGCAATC ATTC GATTGCG TTAACTAATCCCGTT Shewmr7_0431 492001 - 491414 - | hypothetical protein Shewmr7_0432 492467 - 492081 - | hypothetical protein TERM 550 492229 - 492241 + g 79 -7.7 -4.58663 | opp_overlap 492239 CCGGTATCGTGGCCA TCGTC GAA GACGA TTTTTACCGCGTAGT TERM 551 492555 - 492516 - R 89 -10.2 -3.9644 | gap 1, overlap 492517 GCTGTAACATAACAA TTTGTGGCTAAGG-TTACA AAG TGTAAGCCTTAGCCACAGT CACAATTTTGCACGA TERM 552 492554 - 492517 - R 100 -13.7 -2.97382 | gap 1, overlap 492516 CTGTAACATAACAAT TTGTGGCTAAGG-TTACA AAG TGTAAGCCTTAGCCACAG TCACAATTTTGCACG TERM 553 492565 - 492604 + r 83 -11.6 -3.05463 | gap 1, opp_overlap 492572 CACAGTCACAATTTT GCACG-AATGTTCGGTATC TTG GATACCGAACATTGCAGGC TTGGATAACAGCCCT TERM 554 492596 - 492572 - R 100 -15.9 -3.15758 | opp_overlap 492565 ACAATTTTGCACGAA TGTTCGGTATC TTG GATACCGAACA TTGCAGGCTTGGATA hslU 493950 - 492622 - | ATP-dependent protease ATP-binding subunit Shewmr7_0434 494493 - 493969 - | ATP-dependent protease peptidase subunit TERM 555 494624 - 494591 - R 100 -11 -4.70879 | GTGAAAGCGGAAAAA GCCACAGGGCGTTA GGGATT TTATGCCCTGTGGC TAAAGCGGATATGCT Shewmr7_0435 495253 - 494648 - | methylation site containing protein TERM 556 495466 - 495438 - R 100 -11 -5.63517 | overlap 495439 GGGCGAAATAAAAAA GCCCCGAGAACA CTGGC CGTTCTCGGGGG AAGGTTCTAAAGCAG TERM 557 495465 - 495439 - R 100 -14.5 -3.97026 | overlap 495438 GGCGAAATAAAAAAG CCCCGAGAACA CTGGC CGTTCTCGGGG GAAGGTTCTAAAGCA TERM 558 495586 - 495563 - R 74 -6.8 -4.40605 | gap 1, opp_overlap 495585, overlap 495557 495564 495565 495567 495571 AGCGACAAAGACAAA CTGACAAACTG CGA CAGCTTGTC-G CAGGCGCTAAGTGGA TERM 559 495585 - 495565 - R 73 -10.5 -2.53244 | overlap 495557 495563 495564 495567 495571 CGACAAAGACAAACT GACAAACTG CGA CAGCTTGTC GCAGGCGCTAAGTGG TERM 560 495589 - 495571 - R 100 -13.2 -4.04922 | opp_overlap 495585, overlap 495567 495557 495565 495563 495564 AGACAAACTGACAAA CTGCGACA GCT TGTCGCAG GCGCTAAGTGGATTG Shewmr7_0436 496278 - 495670 - | two component LuxR family transcriptional regulator TERM 561 496923 - 496941 + G 70 -11.6 -2.52015 | overlap 496922 GGGTAAGAATGTGGT CGCCAGCG ATC CGCAGGCG CTTGGTGGCTATCAA Shewmr7_0437 496468 - 498291 + | histidine kinase TERM 562 498434 - 498402 - T 100 -16.5 -2.55 | opp_overlap 498407, overlap 498407 GAACATTTTAAGGGA CAAAACAACAGCGCA TGA TGCGCTGTTGTTTTT ATGGCGGAGTGATAT TERM 563 498407 - 498429 + T 100 -16.4 -4.83169 | opp_overlap 498402 498407 TTTTAAGGGACAAAA CAACAGCGCA TGA TGCGCTGTTG TTTTTATGGCGGAGT TERM 564 498429 - 498407 - T 100 -16.4 -4.4715 | opp_overlap 498407, overlap 498402 TTTTAAGGGACAAAA CAACAGCGCA TGA TGCGCTGTTG TTTTTATGGCGGAGT Shewmr7_0438 499616 - 498456 - | sulphate transporter TERM 565 499546 - 499525 - G 84 -4.3 -5.22943 | opp_overlap 499535 ACTAAAGGTAAAAAA GTGCCTAGG TCGG CGAAGGCAC CGCTGGTTTCACCGA TERM 566 499827 - 499798 - R 100 -8.7 -5.32882 | TAGCACGATAAAAAA GAGAGCTTAGC CAGCGGGT ACTAAGCTCTC AAAGGTTTGCAGGGG Shewmr7_0439 501284 - 499896 - | cytochrome c, putative Shewmr7_0440 503062 - 501332 - | hypothetical protein TERM 567 502489 - 502505 + g 72 -3.6 -4.88736 | CGAACACTTGTACGC CTGTGG AGTCG CCCCAG TTTTTGTACATGCTC Shewmr7_0441 503569 - 503240 - | cytochrome c family protein TERM 568 504092 - 504109 + r 93 -9.1 -4.56597 | opp_overlap 504091 GGCATTTAACCCAAG CCACGGT TTAA GCCGTGG TTTTTAAGAAGAGGG TERM 569 504147 - 504120 - R 80 -9.9 -3.61398 | opp_overlap 504145, overlap 504122 CGTGGTTTTTAAGAA GAGGGTTTGGC TAAGCG GCCAAACCCTG CAATCAGCAGTTTAT TERM 570 504145 - 504122 - R 95 -12.5 -3.38812 | overlap 504120 TGGTTTTTAAGAAGA GGGTTTGGC TAAGCG GCCAAACCC TGCAATCAGCAGTTT Shewmr7_0442 505703 - 504165 - | Sel1 domain-containing protein Shewmr7_0443 506657 - 505821 - | MscS mechanosensitive ion channel Shewmr7_0444 506826 - 507305 + | hypothetical protein TERM 571 507313 - 507360 + F 100 -24.6 -4.15833 | gap 1, opp_overlap 507322, overlap 507311 507317 CGCAATAGTCTGTTT TGA-AGCAAATGAGTTGAGGGGA CTT TCCCCTCAACTCATTTGCTCTCG TTTTAGAGTGGTGAT TERM 572 507317 - 507355 + F 100 -27.8 -3.10537 | opp_overlap 507322, overlap 507311 507313 ATAGTCTGTTTTGAA GCAAATGAGTTGAGGGGA CTT TCCCCTCAACTCATTTGC TCTCGTTTTAGAGTG TERM 573 507350 - 507322 - f 100 -20.5 -3.90112 | opp_overlap 507317 507313 CTGTTTTGAAGCAAA TGAGTTGAGGGGA CTT TCCCCTCAACTCA TTTGCTCTCGTTTTA Shewmr7_0445 507722 - 508897 + | ornithine decarboxylase TERM 574 508917 - 508940 + T 79 -6.6 -4.58685 | opp_overlap 508921, overlap 508921 GGCCGCCAGGCAACA AAAAGGGCGC TTAG GCGCCCTTCG TTTTTCCCGCGATTT TERM 575 508921 - 508936 + T 100 -11.8 -3.80855 | opp_overlap 508921, overlap 508917 GCCAGGCAACAAAAA GGGCGC TTAG GCGCCC TTCGTTTTTCCCGCG TERM 576 508936 - 508921 - T 100 -11.8 -5.10461 | opp_overlap 508921 508917 GCCAGGCAACAAAAA GGGCGC TTAG GCGCCC TTCGTTTTTCCCGCG Shewmr7_0446 509172 - 508960 - | hypothetical protein Shewmr7_0447 509585 - 510343 + | uridine phosphorylase TERM 577 510390 - 510418 + T 100 -17.7 -3.16743 | opp_overlap 510390 510397, overlap 510397 TTGCTTGCGTAATAA TAAAAAAGGTGCC CTA GGCACCTTTTTTA TTCGCTGTATCCGTT TERM 578 510418 - 510390 - T 100 -17.7 -3.61398 | opp_overlap 510390 510397, overlap 510397 TTGCTTGCGTAATAA TAAAAAAGGTGCC CTA GGCACCTTTTTTA TTCGCTGTATCCGTT TERM 579 510397 - 510411 + T 100 -11.4 -5.49234 | opp_overlap 510390 510397, overlap 510390 CGTAATAATAAAAAA GGTGCC CTA GGCACC TTTTTTATTCGCTGT TERM 580 510411 - 510397 - T 100 -11.4 -5.64873 | opp_overlap 510397 510390, overlap 510390 CGTAATAATAAAAAA GGTGCC CTA GGCACC TTTTTTATTCGCTGT Shewmr7_0448 511208 - 510456 - | hypothetical protein TERM 581 511187 - 511200 + g 79 -5.3 -5.03201 | AAAGCATTAATGCTA GACAT AGGC ATGTC TTTTTCATTGTTATT Shewmr7_0449 511697 - 512167 + | hypothetical protein Shewmr7_0450 512179 - 513114 + | SPFH domain-containing protein/band 7 family protein Shewmr7_0451 513114 - 514046 + | SPFH domain-containing protein/band 7 family protein TERM 582 514133 - 514102 - T 78 -7.4 -4.46233 | opp_overlap 514104, overlap 514086 514104 514107 TTAAGTGCAAATAAA CTTAAGGCCAAATA GTGA TATTTGGCCTTATT TTTTTTGCGGTGTTT TERM 583 514104 - 514131 + T 100 -14.4 -5.79526 | opp_overlap 514086 514102 514104 514107 AAGTGCAAATAAACT TAAGGCCAAATA GTGA TATTTGGCCTTA TTTTTTTTGCGGTGT TERM 584 514131 - 514104 - T 100 -14.4 -2.55487 | opp_overlap 514104, overlap 514086 514102 514107 AAGTGCAAATAAACT TAAGGCCAAATA GTGA TATTTGGCCTTA TTTTTTTTGCGGTGT TERM 585 514128 - 514107 - T 89 -11.7 -3.41807 | opp_overlap 514104, overlap 514104 514102 TGCAAATAAACTTAA GGCCAAATA GTGA TATTTGGCC TTATTTTTTTTGCGG TERM 586 514313 - 514295 - T 74 -6.7 -4.34267 | opp_overlap 514295 GCATACAATGCAAAA GAACACC ACTTG GGTGCTC TCTAATTTTCAAACC Shewmr7_0452 514870 - 514337 - | alkylhydroperoxidase TERM 587 514783 - 514797 + g 91 -4.2 -5.68438 | opp_overlap 514782, overlap 514785 CAGTCGCATACAGAT TCGGCA CCA TGCCAA TTTTTTGTTTAATGG TERM 588 515639 - 515653 + G 87 -10 -4.3255 | opp_overlap 515639 GCCACCGCTAAGCTA CGTGAC TGA GTCACG TTTATTACTTGCACA Shewmr7_0453 514992 - 515837 + | AraC family transcriptional regulator Shewmr7_0454 516507 - 516283 - | hypothetical protein TERM 589 516754 - 516783 + r 100 -16.5 -3.05536 | opp_overlap 516754, overlap 516745 GGAAAAGATAAAAAA TTGCGGCGAGTGA TGGC TCACGCGCCGCAA TGTTAAGACTCATTT TERM 590 516783 - 516754 - R 100 -16.5 -5.63645 | opp_overlap 516754 516745 GGAAAAGATAAAAAA TTGCGGCGAGTGA TGGC TCACGCGCCGCAA TGTTAAGACTCATTT Shewmr7_0455 517505 - 516810 - | sporulation domain-containing protein argS 519254 - 517509 - | arginyl-tRNA synthetase TERM 591 518760 - 518748 - G 75 -9.1 -3.86916 | CAGCAGCATACCAAA CTGGG TGC CCCAG TCGCCTACGTGGTTT Shewmr7_0457 521576 - 519366 - | primosomal protein N' TERM 592 519500 - 519518 + g 84 -4.4 -5.26316 | opp_overlap 519492 519502, overlap 519502 CTTGAAACATCAATT GACGGCGG AAC TTGCCGGC TTTTTTGTCGAGTGG TERM 593 520351 - 520368 + g 74 -4.7 -4.81551 | AGTGGCGCCGACATC CCCGCCT TGAG GGGCAGG TTTTTGATATCGATA TERM 594 521143 - 521156 + g 71 -5.9 -4.39166 | overlap 521144 TCGAGTAAGCGTTTT TGCGC CGGG GCGCG TTTTAATGTCTCAGG TERM 595 521892 - 521881 - g 74 -2.2 -5.06414 | GGTGGTGAAGAAAAA CTCA TGGC CGAG CAGCTTAACCGTTTC Shewmr7_0458 521680 - 522834 + | hypothetical protein rpmE 523000 - 523212 + | 50S ribosomal protein L31 TERM 596 523232 - 523258 + F 100 -13.8 -2.95906 | opp_overlap 523238, overlap 523238 GTTAGCAATGTTTCT AAAAAAGGCGCC TAT GGCGCCTTTTTG CTTTCTGGCCTTCTG TERM 597 523238 - 523252 + F 100 -12.8 -5.04601 | opp_overlap 523238, overlap 523232 AATGTTTCTAAAAAA GGCGCC TAT GGCGCC TTTTTGCTTTCTGGC TERM 598 523252 - 523238 - f 100 -12.8 -5.01732 | opp_overlap 523232 523238 AATGTTTCTAAAAAA GGCGCC TAT GGCGCC TTTTTGCTTTCTGGC Shewmr7_0460 523724 - 524968 + | malate dehydrogenase TERM 599 525009 - 524994 - f 93 -9 -4.44277 | opp_overlap 524994 GACTAAAACCCAAAA GAGGCT CATT AGCCTC TTTTTTGTTTTTACT TERM 600 524994 - 525009 + F 100 -9 -5.95286 | opp_overlap 524994 GACTAAAACCCAAAA GAGGCT CATT AGCCTC TTTTTTGTTTTTACT TERM 601 525232 - 525214 - g 73 -6.1 -4.54821 | opp_overlap 525214 525218 ATGTTAACTACAAAA TTAACCA GTTTT TGGTTAA TGTCCTTGGCCGCTA Shewmr7_0461 525184 - 527094 + | regulatory protein CsrD Shewmr7_0462 527332 - 528210 + | biogenesis protein MshI Shewmr7_0463 528207 - 528809 + | hypothetical protein TERM 602 528852 - 528869 + G 70 -8.3 -3.7732 | AGTTTGATGTTCTCA GCCAGCG CGAG CGCGGGC TTATTGCTATCGCCG TERM 603 529022 - 529059 + G 85 -12.2 -3.72051 | gap 2 GATTTATATCAGCAG CGACTGGCGATGGATCCT AATC AGGA-CTATCGCCAG-CG TTTAAACTTGTTGCA Shewmr7_0464 528806 - 529456 + | MSHA biogenesis protein MshJ Shewmr7_0465 529443 - 529760 + | MSHA biogenesis protein MshK TERM 604 529910 - 529865 - g 77 -8.9 -4.07568 | overlap 529868 CCCGTTGCTTCAAAA GAAGCGCTGGCTACCTCAATG CAAA CCGCGAGTCAGCCAACGCCTC CACCACCGGCCACTA TERM 605 529907 - 529868 - g 71 -7 -4.17048 | overlap 529865 GTTGCTTCAAAAGAA GCGCTGGCTACCTCAATG CAAA CCGCGAGTCAGCCAACGC CTCCACCACCGGCCA TERM 606 530810 - 530787 - g 71 -6 -4.42386 | gap 1, overlap 530791 GCTTGAGCGATAAAA TCACCGCTTCC CTC GGAGGCG-TGA CGTCCTTAAGCATTA Shewmr7_0466 529775 - 531460 + | pilus (MSHA type) biogenesis protein MshL Shewmr7_0467 531467 - 532396 + | MSHA biogenesis protein MshM Shewmr7_0468 532393 - 533718 + | TPR repeat-containing protein Shewmr7_0469 533715 - 535475 + | type II secretion system protein E TERM 607 535633 - 535643 + G 79 -6.8 -4.59773 | AGCTAAGTCATTTAC GCTG GCG CAGC TTTTTAGCAGTAAAG Shewmr7_0470 535478 - 536698 + | type II secretion system protein TERM 608 537201 - 537211 + G 83 -3.2 -5.49809 | overlap 537198 537208 CTATCAGCTCAACTC TGGC AGG GTCA TTTTTTTGACGTTTC Shewmr7_0471 536737 - 537231 + | hypothetical protein Shewmr7_0472 537308 - 537925 + | methylation site containing protein Shewmr7_0473 538010 - 538534 + | methylation site containing protein TERM 609 538552 - 538568 + F 100 -13.7 -5.81412 | opp_overlap 538552 TGAATTACGGAAAAA GGCCTGC CTA GCAGGCC TTTTTTTTAGGTCAG TERM 610 538568 - 538552 - f 100 -13.7 -4.7078 | opp_overlap 538552 TGAATTACGGAAAAA GGCCTGC CTA GCAGGCC TTTTTTTTAGGTCAG Shewmr7_0474 538855 - 539343 + | methylation site containing protein Shewmr7_0475 539333 - 539911 + | methylation site containing protein Shewmr7_0476 539911 - 540774 + | methylation site containing protein TERM 611 540859 - 540871 + G 76 -2.7 -5.06414 | overlap 540847 CATCGGTATTTTTGT CATTA CCG TGATG TTTTTATTGGCCGCG Shewmr7_0477 540764 - 541219 + | MSHA biogenesis protein MshP TERM 612 541473 - 541463 - g 82 -4 -5.30575 | overlap 541465 TAAAAAGGTAAAAAA TTTC CAT GAAA TGAATGCAAGTGCAT TERM 613 543194 - 543172 - g 76 -7.6 -4.41895 | AACCTTTAAGTAAAA CCCTTTGCCG TAT CGGTAATGGG GGGCTGAGTGAAAAC TERM 614 544078 - 544090 + G 79 -9.1 -4.26188 | ATATTTCTGTCGTAC CTGCC TGT GGCAG TTTTAGCTATATGGA Shewmr7_0478 541212 - 544979 + | MSHA biogenesis protein MshQ Shewmr7_0479 545323 - 546372 + | rod shape-determining protein MreB TERM 615 546389 - 546405 + F 74 -9.4 -3.32159 | overlap 546383 CTAACTTCGGTATGG GGCGGT TAATC ACCGCC TTAGCTTTCCTATGA Shewmr7_0480 546417 - 547478 + | rod shape-determining protein MreC Shewmr7_0481 547478 - 547966 + | rod shape-determining protein MreD Shewmr7_0482 547969 - 548553 + | maf protein TERM 616 548862 - 548846 - g 71 -10.8 -3.1169 | overlap 548835 548844 548843 ACAAGGGCAAAATCA GCCGGG TGTTG CCCGGC ATGCAAGCCGCCTTT Shewmr7_0483 548707 - 550173 + | ribonuclease G TERM 617 554232 - 554208 - gf 79 -7.9 -4.3534 | gap 1 GTTGAACCAGTAAAA GCGGTCGATG AAGATA CATCG-CCGC AAGCGCCAACGCTCC Shewmr7_0484 550173 - 554426 + | hypothetical protein Shewmr7_0485 554350 - 555198 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 618 555732 - 555711 - g 84 -2.3 -5.57054 | gap 1, opp_overlap 555725, overlap 555725 AAGAAGTGAAAAAAA TCAACCTGCT GAA AG-AGGCCGA TGCCTATATTCGTAG Shewmr7_0486 555263 - 556756 + | microcin-processing peptidase 2 TERM 619 556967 - 556935 - g 74 -11.4 -3.09635 | gap 1, opp_overlap 556961 ACCGTTAGCAGCGAA TGCCCAGCC-CAGTA GCTT TACTGAGGCTTGGCA GCAAGTGCTTAAGGT Shewmr7_0487 556819 - 558288 + | outer membrane efflux protein TERM 620 559097 - 559123 + G 74 -9.5 -3.60971 | ACCGTGGAGTTCACC GTCGCCCAT ATTAGTGTG ATGGGCGAC TTTGCGACTTGGCGT Shewmr7_0488 558278 - 559252 + | secretion protein HlyD family protein Shewmr7_0489 559258 - 560547 + | ABC-2 type transporter Shewmr7_0490 560549 - 561700 + | hypothetical protein TERM 621 561820 - 561802 - f 86 -6.8 -5.00616 | opp_overlap 561802 TCGTCCGGCAAAAAA TTAAACAG GGG CCGTTTAA TTTCGAAGCAGTTGC TERM 622 561824 - 561839 + F 86 -3.2 -5.626 | overlap 561825 GGGGCCGTTTAATTT CGAAGC AGTT GCTTCA TTTTTTTATCGCATC Shewmr7_0491 561869 - 562270 + | hypothetical protein TERM 623 562544 - 562580 + F 100 -12.5 -5.07275 | opp_overlap 562549, overlap 562549 GAGAATGCGCGCCGC AAAAATAACCGGGGTAT TCA GTATCCCGGTTATTTTC TTTTTGTGTGTATAG TERM 624 562549 - 562575 + F 100 -12.4 -5.38839 | opp_overlap 562549, overlap 562544 TGCGCGCCGCAAAAA TAACCGGGGTAT TCA GTATCCCGGTTA TTTTCTTTTTGTGTG TERM 625 562575 - 562549 - f 95 -9.5 -4.56597 | opp_overlap 562549 562544 TGCGCGCCGCAAAAA TAACCGGGGTA TTCAG TATCCCGGTTA TTTTCTTTTTGTGTG Shewmr7_0492 562764 - 564095 + | amino acid permease-associated region TERM 626 564117 - 564144 + T 100 -15 -3.38378 | opp_overlap 564117 564122, overlap 564122 GATTGAGCTAGAAAG TAAAAGACCCGC AGTT GCGGGTCTTTTG GTTTTTACAGTGTCG TERM 627 564144 - 564117 - T 95 -12.8 -2.954 | opp_overlap 564117 564122, overlap 564122 GATTGAGCTAGAAAG TAAAAGACCCGC AGTT GCGGGTCTTTTG GTTTTTACAGTGTCG TERM 628 564139 - 564122 - T 100 -12.7 -4.62475 | opp_overlap 564122 564117, overlap 564117 AGCTAGAAAGTAAAA GACCCGC AGTT GCGGGTC TTTTGGTTTTTACAG TERM 629 564122 - 564139 + T 100 -12.7 -4.77757 | opp_overlap 564117 564122, overlap 564117 AGCTAGAAAGTAAAA GACCCGC AGTT GCGGGTC TTTTGGTTTTTACAG Shewmr7_0493 566638 - 564149 - | Ig domain-containing protein Shewmr7_0494 567202 - 566669 - | hypothetical protein TERM 630 568534 - 568549 + G 76 -6 -4.65895 | TAACGGGGGATTATT CCCGCG GCGC CGCTGG TTTTTACGTCGAAAA Shewmr7_0495 567378 - 568721 + | microcin-processing peptidase 1 TERM 631 568789 - 568756 - T 100 -15.5 -4.75174 | opp_overlap 568761, overlap 568761 GAGTCAATCGAAAAA CAAAAGGGCAAATGC AACT GCATTTGCCCTTTTT GATTTTATGTCGTTC TERM 632 568761 - 568784 + T 100 -15.4 -5.15526 | opp_overlap 568756 568761 AATCGAAAAACAAAA GGGCAAATGC AACT GCATTTGCCC TTTTTGATTTTATGT TERM 633 568784 - 568761 - T 100 -15.4 -5.29885 | opp_overlap 568761, overlap 568756 AATCGAAAAACAAAA GGGCAAATGC AACT GCATTTGCCC TTTTTGATTTTATGT Shewmr7_0496 570971 - 568830 - | TonB-dependent receptor TERM 634 569729 - 569743 + g 70 -10 -3.1978 | overlap 569727 CATCCATATTCGGCA TGCCCA TCA TGGGCA TATTGCTGTAGGCCT TERM 635 570044 - 570058 + g 100 -7.8 -5.26316 | overlap 570045 TGCCTTCAGTGTTCA TCGGCA TCT TGCCGG TTTTTTCTGGGGTGA TERM 636 570045 - 570057 + g 73 -9.1 -3.75067 | overlap 570044 GCCTTCAGTGTTCAT CGGCA TCT TGCCG GTTTTTTCTGGGGTG Shewmr7_0497 571977 - 571132 - | hypothetical protein TERM 637 571291 - 571307 + g 80 -2.1 -5.40072 | opp_overlap 571301, overlap 571292 ATTGGGGTTATGTTG CCCGCGA AAA TGGCGGC TTTTTTTCGAAAAGC TERM 638 572390 - 572430 + G 75 -9.1 -3.91072 | gap 1, opp_overlap 572391 572392, overlap 572391 ACCGTAAAGCAGCAA ACCGAAAGGGGTATCAGC ACAGGG GC-GATACCCCTTTCGAC TTTATGGGAGTTTGC TERM 639 572429 - 572391 - g 95 -14.8 -3.8901 | gap 1, opp_overlap 572390 572391, overlap 572392 CCGTAAAGCAGCAAA CCGAAAGGGGTATCAGC ACAGGG GC-GATACCCCTTTCGA CTTTATGGGAGTTTG TERM 640 572391 - 572429 + G 78 -12.6 -2.94161 | gap 1, opp_overlap 572391 572392, overlap 572390 CCGTAAAGCAGCAAA CCGAAAGGGGTATCAGC ACAGGG GC-GATACCCCTTTCGA CTTTATGGGAGTTTG TERM 641 572428 - 572392 - g 90 -16.1 -2.92924 | gap 1, opp_overlap 572391 572390, overlap 572391 CGTAAAGCAGCAAAC CGAAAGGGGTATCAGC ACAGGG GC-GATACCCCTTTCG ACTTTATGGGAGTTT Shewmr7_0498 572233 - 572460 + | hypothetical protein TERM 642 572649 - 572692 + T 86 -11.3 -3.38604 | gap 2, opp_overlap 572651, overlap 572641 572651 CGATTGCCCATAAAA AAGCGAGCCCCTTGACTATTA GTAT TAATA-TC-AGGGGCTCGCTA TTGATGCTTTTAATC TERM 643 572651 - 572690 + T 100 -13.9 -3.25111 | gap 2, opp_overlap 572651, overlap 572649 572641 ATTGCCCATAAAAAA GCGAGCCCCTTGACTATTA GTAT TAATA-TC-AGGGGCTCGC TATTGATGCTTTTAA TERM 644 572690 - 572651 - T 100 -13.9 -5.24531 | gap 2, opp_overlap 572651 572649 572641 ATTGCCCATAAAAAA GCGAGCCCCTTGACTATTA GTAT TAATA-TC-AGGGGCTCGC TATTGATGCTTTTAA Shewmr7_0499 574192 - 572762 - | MiaB-like tRNA modifying enzyme YliG TERM 645 574435 - 574425 - H 73 -2.6 -5.08824 | CGCCGATTTAAAAAA TTTT CAA AAAA ATTAACCCTTTTTAT Shewmr7_0500 574613 - 575323 + | hypothetical protein TERM 646 575356 - 575379 + F 100 -16.8 -5.04175 | GACTCTCTATCACTC TGGGCTGCTC AACT GAGCAGCCCA TTTTTATATGCTTGG Shewmr7_0501 575594 - 576385 + | methyltransferase type 11 TERM 647 576537 - 576517 - f 70 -5.3 -4.42238 | overlap 576518 576519 CGAGGTGAATCAAAA TCGTGGGGC TTC ACCCCACAC CCGACCAAGGAGGAC TERM 648 576536 - 576518 - f 71 -8.8 -3.2486 | overlap 576517 576519 GAGGTGAATCAAAAT CGTGGGGC TTC ACCCCACA CCCGACCAAGGAGGA TERM 649 576535 - 576519 - f 70 -10.1 -2.54434 | overlap 576518 576517 AGGTGAATCAAAATC GTGGGGC TTC ACCCCAC ACCCGACCAAGGAGG TERM 650 576934 - 576973 + F 87 -5 -5.48063 | overlap 576968 AATTAATGCTTTGTT GTTACACGCTAGTAGTTA ACTG TAACCACTAGCGCTCAAC TTTTTTCTGTTGAGT TERM 651 577845 - 577803 - g 84 -10.3 -4.11371 | gap 1, opp_overlap 577803 577810 577816 CAATATCCTCTAAAA TCTATGACTATGATTTTTCG TATG CGAAAAAT-ATAGTTATAGA TATGCTTCGTAAGAA TERM 652 577803 - 577845 + G 78 -12.5 -2.93723 | gap 1, opp_overlap 577803, overlap 577810 577816 CAATATCCTCTAAAA TCTATGACTATGATTTTTCG TATG CGAAAAAT-ATAGTTATAGA TATGCTTCGTAAGAA Shewmr7_0502 577157 - 578359 + | RNA-directed DNA polymerase (Reverse transcriptase) TERM 653 578423 - 578436 + G 84 -2.4 -5.5604 | TGGCGGTATAACTAC TAGC TTAATT GCTA TTTTTTATTACTTGG Shewmr7_0503 578349 - 579059 + | hypothetical protein TERM 654 579336 - 579358 + T 74 -7.6 -4.00882 | AGTCCTCCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTGATCTTGTCTTA TERM 655 579422 - 579405 - T 81 -7.1 -4.63044 | overlap 579416 ATTCATACAAATAAA TTCAAAC CCAA GTTTGAA AAACAAAAAAGGCGC TERM 656 579453 - 579426 - T 100 -11.4 -4.62471 | opp_overlap 579428 579433, overlap 579433 CCCAAGTTTGAAAAA CAAAAAAGGCGC CTAA GCGCCTTTTCTA CATTCAGAGGTTAAG TERM 657 579433 - 579446 + T 95 -9.5 -4.4715 | opp_overlap 579433 579426, overlap 579428 TTGAAAAACAAAAAA GGCGC CTAA GCGCC TTTTCTACATTCAGA TERM 658 579446 - 579433 - T 100 -9.5 -5.93252 | opp_overlap 579428 579433, overlap 579426 TTGAAAAACAAAAAA GGCGC CTAA GCGCC TTTTCTACATTCAGA Shewmr7_0504 580601 - 579498 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 659 579553 - 579584 + g 75 -8.7 -3.86897 | gap 1, overlap 579554 ATATCTGCCTTTGGA TTGGCTGGCAGCGG GATTG CCGC-GCCAGTCAC TTTCTCGGCGATGCC TERM 660 579554 - 579583 + g 76 -12.2 -2.91924 | gap 1, overlap 579553 TATCTGCCTTTGGAT TGGCTGGCAGCGG GATTG CCGC-GCCAGTCA CTTTCTCGGCGATGC Shewmr7_0505 580899 - 580588 - | hypothetical protein TERM 661 581335 - 581322 - g 73 -5.2 -4.72846 | TGACAGATGTAAAAA CGCC GATGAT GGCG CGCGCCGCTGCCGAG TERM 662 581344 - 581358 + G 82 -3.5 -5.24129 | overlap 581338 581343 GATGGCGCGCGCCGC TGCCG AGGGG CGGTA TTTTTTCTCGCAGCA Shewmr7_0506 581306 - 581932 + | pentapeptide repeat-containing protein Shewmr7_0507 582409 - 584703 + | twin-arginine translocation pathway signal Shewmr7_0508 584716 - 585282 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 663 585467 - 585480 + G 70 -8.1 -3.66874 | GGCCGCTGCTATTAT TGGCC CAGT GGCCA TTTGCCTAGGCTTGG Shewmr7_0509 585285 - 586229 + | polysulphide reductase, NrfD TERM 664 586302 - 586286 - T 100 -9.4 -4.8622 | opp_overlap 586286 CCCTGCAAGCAAAAA GCACCG ATTTA CGGTGC TTTTTTTATGAGGGC TERM 665 586286 - 586302 + T 100 -9.4 -5.60993 | opp_overlap 586286 CCCTGCAAGCAAAAA GCACCG ATTTA CGGTGC TTTTTTTATGAGGGC Shewmr7_0510 587086 - 586343 - | hypothetical protein TERM 666 586659 - 586633 - G 80 -10.8 -3.66288 | overlap 586634 TACCCGCCAACAGAA TCGCCATCGGCG GAC CACCAATGGCGG CGATATTACCGAAGA TERM 667 586658 - 586634 - G 82 -14.3 -2.79452 | overlap 586633 ACCCGCCAACAGAAT CGCCATCGGCG GAC CACCAATGGCG GCGATATTACCGAAG TERM 668 587157 - 587107 - R 77 -3.5 -5.13722 | gap 1 TCCATCAAAACAAAA TAGGGATCGTTACT-CTAACCC ATCAGGCA AGATGAGTATTAACGATCCCTA ATGATAAGTAGGATA Shewmr7_0511 587502 - 587188 - | transcriptional repressor protein MetJ Shewmr7_0512 587707 - 588888 + | cystathionine gamma-synthase TERM 669 588865 - 588878 + F 74 -9.5 -3.35679 | ATTCAAGCAGGATTG GCCGC CGTT GCGGC TTGTCAGTAGAGGAA metL 588900 - 591293 + | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 670 591383 - 591368 - f 78 -9 -3.74345 | opp_overlap 591368 ATTCATAGACGTAAA GGACTC ATTC GAGTCC TTTTTTTATTGGCGA TERM 671 591368 - 591383 + F 100 -9 -5.7946 | opp_overlap 591368 ATTCATAGACGTAAA GGACTC ATTC GAGTCC TTTTTTTATTGGCGA TERM 672 591850 - 591834 - g 73 -5.1 -4.68424 | GAACGTATTCAAAAA GAAACCA ATC TGGTTGC CGCGCCGCATTTAAC metF 591597 - 592490 + | 5,10-methylenetetrahydrofolate reductase TERM 673 592508 - 592535 + T 100 -12.8 -4.68593 | opp_overlap 592513, overlap 592513 CAGTAAACATCCATA AAAAACGCCGCT ATTT AGCGGCGTTTTG TTTTTGGCTAGTGAC TERM 674 592530 - 592513 - T 100 -12.7 -5.30686 | opp_overlap 592513 592508 AACATCCATAAAAAA CGCCGCT ATTT AGCGGCG TTTTGTTTTTGGCTA TERM 675 592513 - 592530 + T 100 -12.7 -5.2853 | opp_overlap 592513, overlap 592508 AACATCCATAAAAAA CGCCGCT ATTT AGCGGCG TTTTGTTTTTGGCTA Shewmr7_0515 592673 - 592557 - | hypothetical protein TERM 676 592848 - 592802 - H 93 -12.7 -3.01712 | overlap 592829 TTTTTGTGGCGAATA TTTACTTAGCCTGCTAA CTAAGTATAATGC TTAGCAGGCTAAGTAAA TGAGTAAGCATGATG Shewmr7_0516 592858 - 593334 + | MarR family transcriptional regulator TERM 677 593398 - 593413 + G 70 -3.2 -4.78848 | overlap 593382 CCATGCTCGGTTTTG TGGCCG TGTT TGGCTA TTTTATGTTTGCCGA TERM 678 593539 - 593551 + G 71 -5.5 -4.57581 | AGAATAACCAAGTGG TCGCT AAG GGCGA TTTATTGTTTCAAGT TERM 679 593851 - 593841 - g 71 -5.4 -4.56597 | opp_overlap 593849 GCTCGCCTCGAAAAA CTCA AAG TGAG CCGTGGTCTCTATGG Shewmr7_0517 593343 - 594401 + | secretion protein HlyD family protein Shewmr7_0518 594418 - 595446 + | hypothetical protein TERM 680 595742 - 595727 - g 70 -10.4 -2.93991 | GCCAATCCAACTACA GTCCCG CCAG CGGGAC AAATCTGCGTGACCT Shewmr7_0519 595637 - 596263 + | cytochrome c family protein Shewmr7_0520 596274 - 597329 + | cytochrome c, class I TERM 681 597482 - 597460 - f 74 -7.6 -3.91911 | CCGAGGTGAATCAAA GTCGTGGGGC TTC ACCCCACACC CGACCAAGGAGGACT TERM 682 597647 - 597621 - f 89 -11.6 -3.53012 | opp_overlap 597621 597620 597618, overlap 597625 CCCTTCCCCCCGAAA GCTACGCAGACA TCC TGTCTGCGTCAC GTGATTTTCTTCAAT TERM 683 597643 - 597625 - f 91 -13.2 -2.64155 | opp_overlap 597621 597620 597618, overlap 597621 TCCCCCCGAAAGCTA CGCAGACA TCC TGTCTGCG TCACGTGATTTTCTT TERM 684 597992 - 598010 + F 71 -3.1 -5.06414 | CGTTTATTCCTATGT CTAACTC TGTTC GGGTTGG TTTTTATTAGAAGAG Shewmr7_0521 598061 - 598444 + | hypothetical protein TERM 685 599119 - 599095 - g 73 -9.3 -3.65425 | opp_overlap 599088 TTGATACAGCGCAAA TTTGCCCCTTA TGC CAAGGGGCGAA TCAGTGCGCAATGAC TERM 686 599390 - 599363 - g 91 -7 -5.1523 | overlap 599365 TTCAGAAGATAAAAA TAGCCCATCG GGATTAGG CGATGGGCTG GGATATGAGGTGAAG TERM 687 599388 - 599365 - g 83 -9.6 -4.19621 | overlap 599363 CAGAAGATAAAAATA GCCCATCG GGATTAGG CGATGGGC TGGGATATGAGGTGA Shewmr7_0522 598935 - 599408 + | hypothetical protein Shewmr7_0523 600528 - 599413 - | TonB family protein TERM 688 600620 - 600650 + r 70 -7.7 -3.65084 | gap 1, opp_overlap 600626, overlap 600623 TGGTCAGTAGGGATT GT-AGAAGGTAAGC ATTT GCCTACCTTCTGAC TTTACCGATTTGCTT Shewmr7_0524 601494 - 600652 - | hydratase/decarboxylase family protein Shewmr7_0525 601814 - 602803 + | hypothetical protein TERM 689 603059 - 603075 + G 70 -4.3 -4.59773 | GCTGGATTGAAGGGG CGCAGGC GCT GATTGCG TTTTTAAAGATGCGG Shewmr7_0526 602812 - 603444 + | HAD family hydrolase TERM 690 603495 - 603508 + T 71 -6.7 -4.24283 | TAGTTGGGTGTGTTC GATGC TAAG GCATC TTGTTTATCTTGCTT Shewmr7_0527 603847 - 603479 - | hypothetical protein TERM 691 603595 - 603575 - G 76 -5.3 -4.82667 | CCAGCAGACCAAAAA GCCATAGAG CAG CTCATTGGC ATTGGCCATGGTGGT TERM 692 603800 - 603789 - G 76 -5.8 -4.74103 | overlap 603790 603791 TGTTTAAGGTAAAAA TGGC CGCT GCCA GGGGCGATAAAAGCG TERM 693 604192 - 604165 - R 100 -12.2 -4.19746 | opp_overlap 604172, overlap 604172 GTGATTTTAAAATAA CAAAAAAGGAGC CTAG GCTCCTTTTTTA ATGCGTTTGTTTAAA TERM 694 604172 - 604185 + r 95 -8.1 -5.19261 | opp_overlap 604165 604172 TAAAATAACAAAAAA GGAGC CTAG GCTCC TTTTTTAATGCGTTT TERM 695 604185 - 604172 - R 100 -8.1 -5.77677 | opp_overlap 604172, overlap 604165 TAAAATAACAAAAAA GGAGC CTAG GCTCC TTTTTTAATGCGTTT Shewmr7_0528 606107 - 604239 - | DEAD/DEAH box helicase domain-containing protein Shewmr7_0529 607344 - 606304 - | peptidase M28 TERM 696 606463 - 606440 - G 76 -8.2 -4.13767 | opp_overlap 606442 606444, overlap 606444 GTGGGGACGCCAAAA TAGAGCCAAG GGAT CTTGGCTTTA TGGAAAGGATAATGA TERM 697 606444 - 606459 + g 75 -9 -3.86015 | opp_overlap 606440 606444, overlap 606442 GGACGCCAAAATAGA GCCAAG GGAT CTTGGC TTTATGGAAAGGATA TERM 698 607299 - 607279 - G 100 -15.5 -3.70081 | ACACAAGCGTAATAA GCTCAAGGC AAT GCCTTGAGC GCGGGGGCGAGTGAT Shewmr7_0530 607767 - 607429 - | hypothetical protein TERM 699 607835 - 607871 + r 93 -11 -4.21936 | gap 1, opp_overlap 607839 607841, overlap 607839 607841 ACTGGGCTGGGTTTA TCAA-TAGCGCCTAGGA GTAT TCCAAGGCGCTGTTTGA TTTTGAGGTTATGAC TERM 700 607839 - 607866 + r 100 -12 -4.21408 | opp_overlap 607839 607841, overlap 607835 607841 GGCTGGGTTTATCAA TAGCGCCTAGGA GTAT TCCAAGGCGCTG TTTGATTTTGAGGTT TERM 701 607866 - 607839 - R 74 -9.8 -3.14132 | opp_overlap 607839 607835 607841, overlap 607841 GGCTGGGTTTATCAA TAGCGCCTAGGA GTAT TCCAAGGCGCTG TTTGATTTTGAGGTT TERM 702 607841 - 607864 + r 100 -12.4 -3.695 | opp_overlap 607839 607841, overlap 607839 607835 CTGGGTTTATCAATA GCGCCTAGGA GTAT TCCAAGGCGC TGTTTGATTTTGAGG TERM 703 607864 - 607841 - R 93 -12.4 -3.13403 | opp_overlap 607841 607839 607835, overlap 607839 CTGGGTTTATCAATA GCGCCTAGGA GTAT TCCAAGGCGC TGTTTGATTTTGAGG Shewmr7_0531 610732 - 607880 - | excinuclease ABC subunit A TERM 704 609973 - 609963 - G 70 -8.2 -3.67597 | TCGGCCATCGAATAA CCGC AGT GCGG ACAGGCGAAGTTAGC TERM 705 611337 - 611348 + G 71 -5.8 -4.37092 | AGGCCGTTTTGCAGA TCCC GATG GGGA TTTTATCCGACAAGT Shewmr7_0532 611141 - 612508 + | major facilitator transporter Shewmr7_0533 612616 - 613326 + | single-strand binding protein TERM 706 613356 - 613377 + F 100 -10.9 -5.4433 | gap 1, opp_overlap 613356 AATCGTTTTTTAAAA GCCCTGC-CA TAT TGTGCAGGGC TTTTTGTTTATATAT TERM 707 613377 - 613356 - f 93 -10.9 -4.08064 | gap 1, opp_overlap 613356 AATCGTTTTTTAAAA GCCCTGC-CA TAT TGTGCAGGGC TTTTTGTTTATATAT TERM 708 613557 - 613547 - f 73 -5.4 -4.73614 | opp_overlap 613552, overlap 613552 GACTACTAAAAGAAA GGAA TTC TTCC ATGGAAGATGTAATA Shewmr7_0534 613558 - 614151 + | hypothetical protein TERM 709 614187 - 614159 - f 80 -10.4 -3.41878 | opp_overlap 614161 614164, overlap 614161 614164 TTGCTTAATTTAGAA TAGAACAGGCTT TAATT AAGCCTGTTCTG AATTGCTGATGTGTG TERM 710 614161 - 614185 + F 91 -13 -2.58272 | opp_overlap 614159 614161 614164, overlap 614164 GCTTAATTTAGAATA GAACAGGCTT TAATT AAGCCTGTTC TGAATTGCTGATGTG TERM 711 614185 - 614161 - f 100 -13 -3.281 | opp_overlap 614161 614164, overlap 614159 614164 GCTTAATTTAGAATA GAACAGGCTT TAATT AAGCCTGTTC TGAATTGCTGATGTG TERM 712 614164 - 614182 + F 73 -8.9 -3.43944 | opp_overlap 614161 614159 614164, overlap 614161 TAATTTAGAATAGAA CAGGCTT TAATT AAGCCTG TTCTGAATTGCTGAT TERM 713 614182 - 614164 - f 78 -8.9 -3.77639 | opp_overlap 614164 614161, overlap 614161 614159 TAATTTAGAATAGAA CAGGCTT TAATT AAGCCTG TTCTGAATTGCTGAT TERM 714 616657 - 616622 - g 70 -9.1 -3.55622 | gap 1 CCGAAGTGGCGCAAA CCTTAGGG-GCTATTG CTCGT CAGCAGCTCCCTAAGG GACAGACAATTGTGC Shewmr7_0535 614434 - 617265 + | peptidase M16 domain-containing protein Shewmr7_0536 620144 - 617427 - | hypothetical protein TERM 715 619863 - 619877 + g 70 -2.1 -4.91712 | overlap 619861 TCGGTACAGCAGTGG CGTGA CGACT TTACG TTTTTCTCCATTAAG TERM 716 619965 - 619953 - G 70 -9.1 -3.60525 | TTCACGTAGATACAA GGCAC TAC GTGCC ATTAACGCTGATGCG TERM 717 621480 - 621457 - g 76 -12.6 -2.5806 | opp_overlap 621447 621447, overlap 621456 621445 AAATTGCTCGATAAT GTCCTGATTA CCCT TAATCAGGAC GATATCAAAACTATC Shewmr7_0537 620503 - 621876 + | hypothetical protein TERM 718 621905 - 621922 + T 100 -9.9 -4.87626 | opp_overlap 621905 TAGGGCAATAAAAAA GCACTAC CTTG GTAGTGC TTTTTCGTCTTAACC TERM 719 621922 - 621905 - T 100 -9.9 -5.46657 | opp_overlap 621905 TAGGGCAATAAAAAA GCACTAC CTTG GTAGTGC TTTTTCGTCTTAACC Shewmr7_0538 623366 - 621942 - | MltD domain-containing protein TERM 720 622105 - 622123 + g 74 -7.4 -4.26189 | overlap 622106 622119 TTCGCGGCGGGCTTG TCAGCGGT TTT ACTGCTGG TTTTAGCCTTTGTCG Shewmr7_0539 623535 - 624878 + | serine/threonine protein kinase TERM 721 625489 - 625499 + G 76 -6.8 -4.55287 | CCGCTAAAGCTTCGC CCCA CGA TGGG TTTTATCTGAGTCAG Shewmr7_0540 624972 - 626753 + | Sel1 domain-containing protein Shewmr7_0541 626918 - 627916 + | alcohol dehydrogenase TERM 722 628215 - 628201 - f 73 -2.8 -5.22312 | opp_overlap 628201 628203, overlap 628203 ATTCAGACTAAAAAA CTCATA GTG TATGTG TTGATTTAAGGGTAT Shewmr7_0542 628239 - 628643 + | hypothetical protein TERM 723 628651 - 628665 + T 77 -8.6 -3.91911 | ACGATTAACACTGAG TTTGCC TAG GGCAAA TTTGGTTGGGGTAAG TERM 724 628673 - 628707 + T 82 -8.1 -4.53774 | gap 1, overlap 628673 628674 AGGGCAAATTTGGTT G-GGGTAAGGAATAAA CCAC TTTATTCCTTACCGGC TTTTCCTTCCTTTAT TERM 725 628674 - 628705 + T 83 -11.8 -2.57298 | overlap 628673 628673 GGGCAAATTTGGTTG GGGTAAGGAATAAA CCAC TTTATTCCTTACCG GCTTTTCCTTCCTTT Shewmr7_0543 629784 - 628753 - | aldose 1-epimerase TERM 726 629422 - 629437 + g 70 -4.7 -4.66833 | CACACCGTCGGGAAG TTGGC CTAAGT GCCAA TTTTTCCGATTAAAA TERM 727 629881 - 629834 - R 76 -6.7 -4.56597 | gap 2, opp_overlap 629840 629841 629843, overlap 629837 629841 TTTGCCTCTTAAAAA CA-ACAAATACCATA-GGATTCA AGGT TGAATTCGTATGGTACTTGTCTG GAAGAATGGATTGAG TERM 728 629877 - 629837 - R 82 -8.6 -4.40561 | gap 1, opp_overlap 629840 629841 629843, overlap 629834 629841 GCCTCTTAAAAACAA CAAATACCATA-GGATTCA AGGT TGAATTCGTATGGTACTTG TCTGGAAGAATGGAT TERM 729 629873 - 629841 - R 78 -5.8 -4.76802 | gap 1, opp_overlap 629840 629841 629843, overlap 629837 629834 CTTAAAAACAACAAA TACCATA-GGATTCA AGGT TGAATTCGTATGGTA CTTGTCTGGAAGAAT Shewmr7_0544 631055 - 629910 - | galactokinase TERM 730 630219 - 630233 + g 76 -6.4 -4.68908 | overlap 630220 CTCTAGCGCCCGAGC TGCACT CTG AGTGCG TTTGTTTTCGGTGAC TERM 731 631303 - 631271 - R 100 -13.6 -3.60412 | TAAGGGGAGAGATAA GTTGGCTCAGGA GGTTTAATT TCCTGAGCCAAC ATCAGACTAGATAAG Shewmr7_0545 632978 - 631341 - | sodium/hydrogen exchanger TERM 732 632247 - 632262 + g 70 -3.2 -4.82901 | GTAGAACAAGGATTT GGCC AGCTCAGA GGCC TTTTTATGCCCCGCG TERM 733 632532 - 632513 - G 79 -6.5 -4.63928 | ATACCACGGCAAAAA TATCCTG CATAAT CAGGATA CCAATGGCGACGCGG TERM 734 632827 - 632851 + g 70 -2.7 -4.89063 | GTGACCCCGAGGTTA GCGAGTTCTTG CAG CAAGGGCAGGC TTTCTTTTTCAATAC TERM 735 633074 - 633049 - R 100 -12 -5.252 | opp_overlap 633049 CAGCGTGATAAAAAA GCGGACTTTT AATGAA AAAAGTCCGC TTTTTATTGGTTTTA TERM 736 633049 - 633074 + r 100 -12 -5.28166 | opp_overlap 633049 CAGCGTGATAAAAAA GCGGACTTTT AATGAA AAAAGTCCGC TTTTTATTGGTTTTA dipZ 634972 - 633131 - | thiol:disulfide interchange protein precursor TERM 737 634521 - 634531 + g 76 -8.2 -4.14243 | ATTTGCCCATCATTG GCCG CGA CGGC TTTTAGGGTCACATC Shewmr7_0547 635292 - 634969 - | CutA1 divalent ion tolerance protein TERM 738 635582 - 635610 + G 79 -11.7 -3.21668 | overlap 635581 635596 635598 TCAGTGTTAATTCGT GTGGGCGAAGTGC TTG GCACTTGGACCAC TATTGGTCTGGTGCT Shewmr7_0548 635516 - 636136 + | FxsA cytoplasmic membrane protein TERM 739 636180 - 636213 + F 100 -8.9 -5.29846 | opp_overlap 636184, overlap 636184 CTCATCTTCATTCTG CAAACTCCCATGGGT GCAA ACCTTTGGGAGTTTA TTTTTATTTGGGCTT TERM 740 636184 - 636209 + F 100 -9.7 -5.12987 | opp_overlap 636184, overlap 636180 TCTTCATTCTGCAAA CTCCCATGGGT GCAA ACCTTTGGGAG TTTATTTTTATTTGG Shewmr7_0549 636327 - 636710 + | hypothetical protein TERM 741 636860 - 636825 - T 100 -13.5 -5.10163 | gap 1 AAGCGGAAAAGAAAA GGCCAATCGATG-AGT AATGA ACTGCATCGATCGGCC ACGCCGGGAAGCGTT Shewmr7_0550 639981 - 636892 - | acriflavin resistance protein TERM 742 639432 - 639459 + g 74 -4.1 -5.00616 | gap 1, overlap 639432 639433 TTTCAATCACAACTT G-CTCGGTGACG CTGCC CGCCACTGAGAC TTTTTTCACGCCGGG TERM 743 639571 - 639561 - G 70 -3.2 -4.89521 | ACAGGTTAAATAAAA TGCC GTA GACA TCGCCAAAGTCGTCA Shewmr7_0551 641067 - 639985 - | RND family efflux transporter MFP subunit Shewmr7_0552 641197 - 642189 + | LysR family transcriptional regulator Shewmr7_0553 643635 - 642277 - | MATE efflux family protein groES 643863 - 644153 + | co-chaperonin GroES TERM 744 644410 - 644389 - g 76 -5.9 -4.64861 | CTGTTGCAAAAGAAA TCGAATTAG AAGA CAAATTCGA AAACATGGGCGCGCA TERM 745 644843 - 644831 - g 73 -9.1 -3.73088 | ATACTTCATCAACAA GCCAG AAA CTGGC AGCGTTGAATTAGAT TERM 746 645411 - 645390 - g 84 -2.2 -5.5762 | gap 1, overlap 645392 645402 645404 645405 ATGAAAGAGAAAAAA GC-TCGCGT AGAAG ACGCGCTGC ACGCAACCCGTGCAG TERM 747 645429 - 645404 - g 76 -11.2 -3.21395 | gap 1, overlap 645392 645390 645402 645405 AGCTCGCGTAGAAGA CGCGCTGCACG CAACC CGTGCAGCG-G TTGAAGAAGGCGTGG TERM 748 645429 - 645405 - g 70 -11.4 -2.52623 | overlap 645392 645390 645404 645402 GCTCGCGTAGAAGAC GCGCTGCACG CAACC CGTGCAGCGG TTGAAGAAGGCGTGG groEL 644211 - 645848 + | chaperonin GroEL TERM 749 645930 - 645956 + F 100 -13 -3.41602 | opp_overlap 645924 TGGATACAACGCCGG GGGGCATGTTGA AGA TCAACGAGCCCC TTCTAATCCAGTAGA TERM 750 646036 - 646063 + F 100 -17.2 -3.52341 | opp_overlap 646007 646028, overlap 646007 646005 TGAAAAGTCTATCTT CTGGGTATTGGT CAAA ACCAATACCCAG TTATGATATTAAGAT TERM 751 646915 - 646892 - f 74 -7.6 -3.98282 | gap 1, opp_overlap 646910 646912 CGCATAGTAACTAAA GGGCAAAA-AT TTT ATATTTTGCCC GACCCCTGATGGGAG TERM 752 646930 - 646965 + F 83 -9.1 -4.2349 | gap 1, opp_overlap 646939 646940, overlap 646912 646910 CGACCCCTGATGGGA GCAGA-AGAACTCTCC CATCA GGGGAGATCTATCTGC TTTTCGATCTGGGAG Shewmr7_0556 647011 - 648660 + | RNA-directed DNA polymerase TERM 753 648724 - 648742 + F 76 -9.6 -3.56576 | overlap 648720 AATAAGTTAATTTTT CTAATGGC GGG GCCGTTAG TTAGTTATTAACTTT TERM 754 648932 - 648947 + F 76 -7.6 -4.08546 | ATTCTGTTTTCGATA TCAGGT ATAA ACCTGA TTTGTCATTAATCCT TERM 755 649250 - 649293 + F 78 -6 -4.84363 | overlap 649252 649253 649264 ACTCGCACGTACGGT TCTTAGGGGAGGGACAAGCA GTAA TGCTTGTTCCTTACCCGACA TTTTTGCTGGTTTAA TERM 756 649253 - 649291 + F 71 -9.7 -2.68636 | gap 1, overlap 649252 649250 649264 CGCACGTACGGTTCT TAGGG-GAGGGACAAGCA GTAA TGCTTGTTCCTTACCCGA CATTTTTGCTGGTTT TERM 757 649495 - 649458 - f 100 -11.3 -5.0916 | opp_overlap 649459 649464, overlap 649459 649464 CTTGTAAGAGAAAAA TGAAAACCCCGACTCGG GTAA CTGAGTCGGGGTTTTGT TTTTGGACTGGTAAT TERM 758 649459 - 649494 + F 100 -17 -4.63527 | opp_overlap 649458 649459 649464, overlap 649464 TTGTAAGAGAAAAAT GAAAACCCCGACTCGG GTAA CTGAGTCGGGGTTTTG TTTTTGGACTGGTAA TERM 759 649494 - 649459 - f 100 -14.8 -3.64773 | opp_overlap 649459 649464, overlap 649458 649464 TTGTAAGAGAAAAAT GAAAACCCCGACTCGG GTAA CTGAGTCGGGGTTTTG TTTTTGGACTGGTAA TERM 760 649489 - 649464 - f 100 -14.7 -4.84033 | opp_overlap 649464 649459, overlap 649459 649458 AGAGAAAAATGAAAA CCCCGACTCGG GTAA CTGAGTCGGGG TTTTGTTTTTGGACT TERM 761 649464 - 649489 + F 100 -16.9 -5.27023 | opp_overlap 649459 649458 649464, overlap 649459 AGAGAAAAATGAAAA CCCCGACTCGG GTAA CTGAGTCGGGG TTTTGTTTTTGGACT TERM 762 649538 - 649553 + F 75 -3.3 -5.22039 | CGATTTTCAAGCTAG GTGTA CTTACC TACAC TTTTTTGGATTTAAG TERM 763 649631 - 649660 + F 79 -11 -3.06302 | opp_overlap 649631 649638, overlap 649638 TGTCATTATCAATAA TCAAAAAGTGTA CTTATA TACACTTTTTGA TTGAATGGGACTGAT TERM 764 649660 - 649631 - f 95 -11.7 -3.75024 | opp_overlap 649631 649638, overlap 649638 TGTCATTATCAATAA TCAAAAAGTGTAC TTAT ATACACTTTTTGA TTGAATGGGACTGAT TERM 765 649653 - 649638 - f 74 -4 -5.00339 | opp_overlap 649638 649631, overlap 649631 ATCAATAATCAAAAA GTGTAC TTAT ATACAC TTTTTGATTGAATGG Shewmr7_0557 649718 - 649954 + | XRE family transcriptional regulator Shewmr7_0558 649988 - 651259 + | HipA domain-containing protein TERM 766 651287 - 651313 + F 70 -5.8 -4.31293 | overlap 651283 CTCAGCTGTAATTTC GCAAGGGTGAAA TAC TATCACCTTGGC TTTGTTAATCTATAG TERM 767 652514 - 652534 + G 76 -4.7 -4.96106 | CATTCAGTATATTTT TCAGCTAAT ACC AATGGCTGA TTTTTCGTCTTTATA Shewmr7_0559 652056 - 652652 + | hypothetical protein Shewmr7_0560 652649 - 656296 + | putative outer membrane adhesin like protein TERM 768 656337 - 656320 - T 71 -7 -4.08945 | opp_overlap 656320 AGTATGCCGCCAAAA GCAAGC TTAACC GCTTGC TTTTTTATTGCCTGA TERM 769 656320 - 656337 + T 91 -7 -5.4833 | opp_overlap 656320 AGTATGCCGCCAAAA GCAAGC TTAACC GCTTGC TTTTTTATTGCCTGA TERM 770 656474 - 656498 + T 85 -5.8 -5.10665 | AATTCATCCACTATT GCTGAGATAA TGCCT TTATCTTGGC TTTTATTTCTTCCCT Shewmr7_0561 657314 - 656469 - | LysR family transcriptional regulator TERM 771 656754 - 656767 + g 79 -5.3 -5.02074 | TTCATTGGCAAGGAG TTCGA AGGC TCGAA TTTTTTCCCAGGTGC TERM 772 656929 - 656944 + g 70 -4.7 -4.66537 | CTGGTCCTAATGCTG TCGAC TATGAT GTCGA TTTTCTCTTGACGCA Shewmr7_0562 657456 - 658973 + | sulfatase TERM 773 659026 - 658997 - f 100 -16.6 -4.32857 | TTTTTTAAATAGAAA TTGGCCGACGTT TATTTG AACGTCGGCCAA TACAAGGAAGTCTGC TERM 774 660236 - 660225 - g 71 -7.2 -4.07687 | ATCGCCTGCTGAAAA CCCC TGAT GGGG AAGAAGGGCTCAATT Shewmr7_0563 659042 - 660349 + | radical SAM domain-containing protein TERM 775 660951 - 660935 - g 76 -7.9 -4.2828 | CCGCAGTGAGGAAAA CGGCGTT TTT AGCGCCG AAAAACCGCAAACCA Shewmr7_0564 660333 - 661334 + | ATPase TERM 776 662046 - 662072 + G 73 -3.1 -5.05601 | gap 1, opp_overlap 662033, overlap 662048 662051 AACAGTTAAAGTACC TGCAGCAGCATA ATGA TGTGCTG-TGTA TTTTTATCTCTGATC Shewmr7_0565 661340 - 662335 + | hypothetical protein Shewmr7_0566 662332 - 662850 + | hypothetical protein Shewmr7_0567 662837 - 663844 + | von Willebrand factor, type A TERM 777 664432 - 664413 - g 77 -12.2 -3.14344 | opp_overlap 664410 664408 CAGCTCGCTGAGCAA TTACCCGC GAAT GCGGGTAA CAGTGTTTTACTGCT Shewmr7_0568 663837 - 665558 + | von Willebrand factor, type A Shewmr7_0569 665555 - 666985 + | hypothetical protein TERM 778 667511 - 667493 - g 70 -4.5 -4.7173 | overlap 667496 CACCACAGGGAAAAA GTACACC GAAAT GGTGTTC CAACCTATGTTAGAG Shewmr7_0570 667020 - 668003 + | putative nonspecific acid phosphatase precursor TERM 779 668055 - 668094 + F 100 -8.8 -4.58395 | gap 1, overlap 668059 668062 TCTGAAAACAGTTCG TCGTGAATGGGTTTATCCC ATC GGGATAAACCCATT-GTTA TTTTTGCGCCCTAGC TERM 780 668059 - 668091 + F 100 -16.5 -4.40963 | overlap 668055 668062 AAAACAGTTCGTCGT GAATGGGTTTATCCC ATC GGGATAAACCCATTG TTATTTTTGCGCCCT TERM 781 668062 - 668088 + F 100 -18.2 -4.31587 | overlap 668059 668055 ACAGTTCGTCGTGAA TGGGTTTATCCC ATC GGGATAAACCCA TTGTTATTTTTGCGC Shewmr7_0571 668192 - 668596 + | 4-carboxymuconolactone decarboxylase Shewmr7_0572 669294 - 668761 - | hypothetical protein TERM 782 669200 - 669214 + g 74 -7.1 -4.431 | overlap 669210 TGCGTGGCTGGCTTG TCCGC AGCTG GCGGA TTTTGTGCCTGAGTC TERM 783 669428 - 669450 + r 100 -15 -3.87869 | opp_overlap 669428, overlap 669434 AAGTACTGAAGAAAA GGTAAAGCGA ATT TCGCTTTACC TTTATAAGCCATTGG TERM 784 669450 - 669428 - R 100 -15 -4.69656 | opp_overlap 669428 669434 AAGTACTGAAGAAAA GGTAAAGCGA ATT TCGCTTTACC TTTATAAGCCATTGG Shewmr7_0573 669728 - 669477 - | hypothetical protein TERM 785 670068 - 670089 + H 72 -7.4 -4.00042 | opp_overlap 670068 670064 670063 AGCAAACAAACGACA CATATCTG GGCAGG CAGATATG TTCTTTACTAGAAGA TERM 786 670366 - 670347 - g 73 -2.8 -5.0133 | opp_overlap 670357, overlap 670349 670356 670357 GACGCCGTTAAAAAA GACATCAA AGCC CTGATGAC CGAGTCTCAGGATTG Shewmr7_0574 670119 - 672338 + | catalase/peroxidase HPI TERM 787 672387 - 672413 + F 100 -10.9 -5.26155 | TTCAGCTATCGTAAG TCCATCCGTGC CCTGT GCATGGGTGGA TTTTTCTCTTTCTAT Shewmr7_0575 672543 - 673283 + | hypothetical protein Shewmr7_0576 673380 - 674867 + | ABC transporter related TERM 788 675009 - 675021 + F 72 -6.3 -4.2828 | CTTATAGTAGGATTT TAAGC TTG GCTTA TTTTCCTACCTCAAC TERM 789 675366 - 675380 + G 76 -7.2 -4.42851 | opp_overlap 675366 TCAATTACAGGACAA TGCAAA ATT TTTGCA TTTTCAATTTATTGC Shewmr7_0577 675211 - 675783 + | hypothetical protein Shewmr7_0578 676291 - 675929 - | thioredoxin domain-containing protein TERM 790 676588 - 676569 - g 71 -6.4 -4.42974 | opp_overlap 676580 CTTACACACAATAAA GTCGCC GTGATGGT GGCGAC CGCCTTATACGTTGG TERM 791 676975 - 676956 - g 74 -4.2 -4.83615 | overlap 676957 TATCTGGCAGAAAAA CGTGCCAC AGTT GTTGCACA AGCGCAGGCATTACA TERM 792 678548 - 678536 - g 70 -3.3 -4.75372 | ACCATTCACCAAAAA TCCGG TCA CTGGA CAATGGGCGACCTTA TERM 793 679670 - 679647 - g 70 -9.6 -3.18681 | opp_overlap 679645 GGGCAAGTGGACCAA GGTCGCGATA TCAG TATCTCGACC GCTCTGGTAACTGGG TERM 794 680967 - 680957 - g 71 -6.8 -4.24002 | TCTCAAAGTTGAAAA CCAC TTA GTGG GTGCCGACAGTGAAG Shewmr7_0579 676551 - 681467 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 795 681561 - 681540 - T 100 -14.5 -4.1899 | opp_overlap 681540 TCATCCGAGCTAAAA GCCCCTGTT GATT AACAGGGGC TTTTTATTTCGTTAA TERM 796 681540 - 681561 + T 100 -14.5 -5.38326 | opp_overlap 681540 TCATCCGAGCTAAAA GCCCCTGTT GATT AACAGGGGC TTTTTATTTCGTTAA Shewmr7_0580 682166 - 681573 - | cold-shock DNA-binding protein family protein TERM 797 681977 - 681999 + g 70 -2.7 -4.81359 | overlap 681978 CTTCGATAGAAGCCT TGATGGC CTTCACTTT GCCATCG TTTTGTATTTCGGTT Shewmr7_0581 684231 - 682252 - | diguanylate cyclase with PAS/PAC sensor Shewmr7_0582 685313 - 684486 - | hypothetical protein TERM 798 686500 - 686480 - g 82 -3.9 -5.24129 | overlap 686481 GTGTGGGACAAAAAA GGCTTCGAT GCC ATCGATGCT GCCAATACCGATCAC Shewmr7_0583 685667 - 687163 + | alkaline phosphatase Shewmr7_0584 687206 - 688846 + | alkaline phosphatase TERM 799 688882 - 688853 - f 72 -7.7 -3.81027 | opp_overlap 688854, overlap 688847 688854 GCGAAGTAAGCCAAA TGCCGATGGTGGG TTGT CCTGCCATCGGCT TTTATCTAACTGTCT TERM 800 688881 - 688854 - f 77 -11.2 -2.88134 | opp_overlap 688854, overlap 688853 688847 CGAAGTAAGCCAAAT GCCGATGGTGGG TTGT CCTGCCATCGGC TTTTATCTAACTGTC TERM 801 688854 - 688881 + F 100 -15.6 -4.56358 | opp_overlap 688854 688853 688847 CGAAGTAAGCCAAAT GCCGATGGTGGG TTGT CCTGCCATCGGC TTTTATCTAACTGTC Shewmr7_0585 688955 - 689701 + | hypothetical protein TERM 802 689720 - 689747 + F 100 -14.2 -4.56597 | opp_overlap 689726, overlap 689721 689726 AGCATTTGGGATCTC ACAAAACGCCCG CATT CGGGCGTTTTGC TTTTTGGGGGAGCAC TERM 803 689721 - 689746 + F 100 -17.7 -3.33744 | opp_overlap 689726, overlap 689720 689726 GCATTTGGGATCTCA CAAAACGCCCG CATT CGGGCGTTTTG CTTTTTGGGGGAGCA TERM 804 689741 - 689726 - f 100 -11.8 -4.4009 | opp_overlap 689726 689721 689720 TGGGATCTCACAAAA CGCCCG CATT CGGGCG TTTTGCTTTTTGGGG TERM 805 689726 - 689741 + F 100 -11.8 -4.77757 | opp_overlap 689726, overlap 689721 689720 TGGGATCTCACAAAA CGCCCG CATT CGGGCG TTTTGCTTTTTGGGG TERM 806 690164 - 690187 + G 77 -9.6 -3.72893 | opp_overlap 690164 690168, overlap 690168 AACAGCATTAGCCAA GAAATGGGGC TCAA GGCCCATTTC TTTAATGCGCCCATG Shewmr7_0586 689855 - 690685 + | AraC family transcriptional regulator Shewmr7_0587 690776 - 691486 + | lysine exporter protein LysE/YggA Shewmr7_0588 691620 - 692429 + | hypothetical protein TERM 807 692558 - 692579 + G 73 -5.1 -4.72272 | TAAAATCGCCATATT CAGCAGTGC CATA GTGCTGTTG TTTTTACTGACAGAA Shewmr7_0589 692529 - 693263 + | hypothetical protein TERM 808 693291 - 693272 - T 90 -10.8 -3.92324 | opp_overlap 693269 693274 GTTTTGAATACTAAA GAGAGCTT GAAT AAGCTCTC TACTCGTTTCATTTA Shewmr7_0590 693856 - 693314 - | isochorismatase hydrolase TERM 809 694033 - 694019 - H 70 -5.6 -4.25848 | opp_overlap 694018 AATTGCTCACTAAAA GAGTGC GTC GCTCTC CTGCTTGCACAAGTC TERM 810 694039 - 694055 + H 73 -5.1 -4.72272 | CGTCGCTCTCCTGCT TGCACAA GTC TGGTGCA TTTTTAATCGAACCA Shewmr7_0591 694182 - 694520 + | nitrogen regulatory protein P-II Shewmr7_0592 694531 - 695781 + | Rh family protein/ammonium transporter TERM 811 695848 - 695830 - f 86 -10.3 -3.88731 | opp_overlap 695830 TAAGAGGATAGTAAA GCAGAGC CTAGT GCTCTGC TTTTTTTTATGGGTC TERM 812 695830 - 695848 + F 100 -10.3 -5.96219 | opp_overlap 695830 TAAGAGGATAGTAAA GCAGAGC CTAGT GCTCTGC TTTTTTTTATGGGTC Shewmr7_0593 695899 - 696246 + | hypothetical protein Shewmr7_0594 696365 - 697552 + | TPR repeat-containing protein TERM 813 697565 - 697600 + F 100 -4 -5.95539 | gap 1 TAATCCTTTACTCAA CCTCCTTTGTTTG-CGT CTG ACTACTGGCAAAGGAGG TTTTTTTATTTCCGC TERM 814 698225 - 698245 + G 71 -6.2 -4.33165 | TCAAACTGAACGATG GTTTACGT ACCGC GCGTAAAC TTTTAGTCGATTTGA TERM 815 698459 - 698484 + G 74 -4.5 -4.87665 | opp_overlap 698422 698421, overlap 698460 TGGCGATTGATGCCA TTGGCGCCGCG AATG CGCCGCACCAC TTTTTATCGGTGACC Shewmr7_0595 697861 - 698919 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 816 698962 - 698938 - T 100 -15.9 -4.7416 | opp_overlap 698938, overlap 698942 TGAAAAGCTCAAAAA TAAAGGCGCTA TCC TAGCGCCTTTA TTTTTATTATTTCTT TERM 817 698938 - 698962 + T 100 -15.9 -5.44198 | opp_overlap 698938 698942 TGAAAAGCTCAAAAA TAAAGGCGCTA TCC TAGCGCCTTTA TTTTTATTATTTCTT TERM 818 698958 - 698942 - T 100 -12.3 -4.88293 | opp_overlap 698938, overlap 698938 AAGCTCAAAAATAAA GGCGCTA TCC TAGCGCC TTTATTTTTATTATT Shewmr7_0596 699145 - 698969 - | hypothetical protein TERM 819 700639 - 700657 + G 74 -7.4 -4.13014 | CCTTAGACTTTGAGC CTAAGCGC GGT GAGCTTAG TTTTGAACATGTGAG Shewmr7_0597 699594 - 701384 + | ABC transporter related Shewmr7_0598 701495 - 701752 + | hypothetical protein TERM 820 701805 - 701776 - T 88 -9.5 -4.41047 | opp_overlap 701779, overlap 701779 ACTGCTCAATCAAAA CAAGGGAATATAA GAAA TTATATTCCCTTT GGTTTATCTGCCTTC TERM 821 701779 - 701802 + T 93 -11.2 -4.18042 | opp_overlap 701776 701779 GCTCAATCAAAACAA GGGAATATAA GAAA TTATATTCCC TTTGGTTTATCTGCC TERM 822 701802 - 701779 - T 100 -11.2 -4.32402 | opp_overlap 701779, overlap 701776 GCTCAATCAAAACAA GGGAATATAA GAAA TTATATTCCC TTTGGTTTATCTGCC Shewmr7_0599 701999 - 701793 - | hypothetical protein Shewmr7_0600 703634 - 702144 - | ferredoxin-dependent glutamate synthase TERM 823 702625 - 702640 + g 70 -10.4 -2.89564 | TGAGGGGCGGCTCCC GTGCCG CCGT CGGCAC TGTCTAAGGTAAAAA TERM 824 702682 - 702657 - G 83 -5.3 -5.15969 | gap 1, opp_overlap 702658, overlap 702658 702659 GTCTAAGGTAAAAAA GTCCGGGGCGGA TGC TTCGCCACGG-C GCTCAATTTCATCGC Shewmr7_0601 704239 - 703646 - | phosphoglycerate mutase TERM 825 704752 - 704762 + G 83 -5.4 -5.09426 | ATAGGATTGTGAGTT TTGC GAC GCAA TTTTTTAGCATTCAC Shewmr7_0602 704325 - 705017 + | hypothetical protein TERM 826 705066 - 705082 + F 100 -8.7 -5.06414 | TTCCCTTGTGTTAAG CCCCTTG CAA TAAGGGG TTTTTGTTGCGCAGA TERM 827 705499 - 705512 + G 74 -3.7 -5.05601 | overlap 705489 705500 TGTTAGCCACGGGCA CGGCC GTGG GGCCA TTTTTATCTATGCTC Shewmr7_0603 705147 - 705896 + | oxidoreductase FAD/NAD(P)-binding subunit Shewmr7_0604 705967 - 706563 + | glutathione S-transferase domain-containing protein Shewmr7_0605 706993 - 706571 - | hypothetical protein TERM 828 706844 - 706871 + g 91 -3.4 -5.75538 | gap 1, overlap 706848 706852 ACTGACACAGTGGAA GCGGCGATCTTGC CCT GCAAG-TCGTTGA TTTTTATTTTTTGCG TERM 829 706848 - 706867 + g 71 -7.2 -4.0464 | gap 1, overlap 706844 706852 ACACAGTGGAAGCGG CGATCTTGC CCT GCAAG-TCG TTGATTTTTATTTTT Shewmr7_0606 707212 - 708219 + | extracellular solute-binding protein TERM 830 708290 - 708271 - f 83 -10.7 -3.41125 | opp_overlap 708271 GTTAGACAGTGATAA GTGCGCC TTGATT GGCGCAC TTAGGTTAAAGGATC TERM 831 708271 - 708290 + F 79 -10.7 -3.17392 | opp_overlap 708271 GTTAGACAGTGATAA GTGCGCC TTGATT GGCGCAC TTAGGTTAAAGGATC TERM 832 708784 - 708794 + G 72 -8.2 -3.86346 | ATATTTATCTGTTGG CGCG TAC CGCG TTTATGGAGCAATCC Shewmr7_0607 708309 - 709943 + | binding-protein-dependent transport systems inner membrane component TERM 833 710284 - 710265 - g 77 -10 -3.66908 | gap 1, opp_overlap 710273 GCGTGGCAAAATTAA CGCC-TGCG CAG CGCAAGGCG CGGTTAGATGACATG Shewmr7_0608 709940 - 710989 + | ABC transporter related Shewmr7_0609 711129 - 712841 + | gamma-glutamyltransferase 2 TERM 834 712892 - 712917 + F 100 -13.4 -5.09762 | opp_overlap 712888 CTTGCGTAACACTGA TTGACGAGGC GTAATG GCCTCGTCAA TTTTTATATTCCAGT Shewmr7_0610 713048 - 713989 + | Dyp-type peroxidase family protein TERM 835 714012 - 714038 + T 100 -9.5 -5.38054 | opp_overlap 714012 TAAAACCTTAGATAA CGCACTGAG CCTTAAAAC CTCAGTGCG TTTTTGTTTGTGGGC TERM 836 714038 - 714012 - T 89 -11.6 -3.54721 | opp_overlap 714012 TAAAACCTTAGATAA CGCACTGAGCCT TAA AACCTCAGTGCG TTTTTGTTTGTGGGC Shewmr7_0611 714956 - 714054 - | LysR family transcriptional regulator Shewmr7_0612 715060 - 715692 + | NAD-dependent epimerase/dehydratase TERM 837 715916 - 715887 - T 86 -7.9 -4.60797 | opp_overlap 715892 715914, overlap 715892 TGCGTACAGATAAAA GAGAACAGGTCAG CAAG CTGACCTGTTTTT TTATTCTGCGTAGTT TERM 838 715911 - 715892 - T 100 -12.2 -4.06765 | opp_overlap 715892, overlap 715887 ACAGATAAAAGAGAA CAGGTCAG CAAG CTGACCTG TTTTTTTATTCTGCG TERM 839 715892 - 715911 + T 100 -12.2 -5.88565 | opp_overlap 715887 715892 ACAGATAAAAGAGAA CAGGTCAG CAAG CTGACCTG TTTTTTTATTCTGCG Shewmr7_0613 716387 - 715917 - | arginine repressor Shewmr7_0614 716678 - 717613 + | malate dehydrogenase TERM 840 717635 - 717652 + T 100 -12.7 -5.60993 | opp_overlap 717635 TGGATTATCAAAAAA CGGAGCC CAAT GGCTCCG TTTTTTTATGGGCAG TERM 841 717652 - 717635 - T 100 -12.7 -5.1861 | opp_overlap 717635 TGGATTATCAAAAAA CGGAGCC CAAT GGCTCCG TTTTTTTATGGGCAG Shewmr7_0615 718082 - 717693 - | putative thiol-disulphide oxidoreductase DCC Shewmr7_0616 718293 - 719012 + | short chain dehydrogenase Shewmr7_0617 719839 - 719153 - | 5-formyltetrahydrofolate cyclo-ligase Shewmr7_0618 720445 - 720143 - | cell division protein ZapA TERM 842 720178 - 720210 + g 76 -6.9 -4.54205 | opp_overlap 720193, overlap 720179 CTAAGGCGTTTTCCA AGGTTGACTGCAACA GGC TGATGCGGTCATCCA TTTGTTTCATATACT TERM 843 720179 - 720209 + g 73 -10.4 -3.31438 | opp_overlap 720193, overlap 720178 TAAGGCGTTTTCCAA GGTTGACTGCAACA GGC TGATGCGGTCATCC ATTTGTTTCATATAC Shewmr7_0619 720671 - 721246 + | yecA family protein TERM 844 721262 - 721278 + F 100 -12.3 -3.82097 | opp_overlap 721262 TTGTAGAAAGAGAAA GGCGGAA CGA TTCCGCC TTTAATGAGTTTCAA TERM 845 721278 - 721262 - f 100 -12.3 -4.40003 | opp_overlap 721262 TTGTAGAAAGAGAAA GGCGGAA CGA TTCCGCC TTTAATGAGTTTCAA Shewmr7_0620 721352 - 722575 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase Shewmr7_0621 722612 - 723835 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 846 725114 - 725102 - g 100 -9.1 -5.10461 | opp_overlap 725101 GTGATGGAAGAAAAA GGCGT GTT ACGCC ATGATATGCCAGTAT gcvT 724235 - 725329 + | glycine cleavage system aminomethyltransferase T Shewmr7_0623 725355 - 725744 + | glycine cleavage system protein H TERM 847 725754 - 725781 + F 100 -14.2 -4.0896 | opp_overlap 725762, overlap 725758 GAATAATCGTCGACG CTAACGAAGCCC CAAG GGGCTTCGTTTG TTTTAGCGCAAGTTT TERM 848 725758 - 725777 + F 100 -13.6 -4.64861 | opp_overlap 725762, overlap 725754 AATCGTCGACGCTAA CGAAGCCC CAAG GGGCTTCG TTTGTTTTAGCGCAA TERM 849 728134 - 728116 - g 75 -8.8 -3.86995 | CGAAAGCGATAACAA CGGTGCAG TTT CTGCAGCG CCATACGGCAGTGCT Shewmr7_0624 725867 - 728755 + | glycine dehydrogenase TERM 850 728766 - 728785 + F 100 -13.6 -3.16742 | opp_overlap 728782 728783 AATAATTGCTGGTTT GGGCTTGC GACA GCAAGCCC TTGCTAAGAGTTAGC TERM 851 728848 - 728833 - f 100 -10.4 -4.67904 | opp_overlap 728833 TATGAACGTTAAAAA GCGACC TTAG GGTCGC TTTTTTGTTTTATGC TERM 852 728833 - 728848 + F 100 -10.4 -5.86976 | opp_overlap 728833 TATGAACGTTAAAAA GCGACC TTAG GGTCGC TTTTTTGTTTTATGC TERM 853 728935 - 728947 + F 75 -9.1 -3.71883 | overlap 728938 TTGTACTTCCTAATT GCCTG CCG CAGGC TTTGGCATTCTCTTA Shewmr7_0625 729171 - 730019 + | hypothetical protein TERM 854 730143 - 730162 + T 100 -13.6 -3.16742 | opp_overlap 730141 730140 730159 730160 TTGATGTGATAATTT GGGCTTGC GACA GCAAGCCC TTGCTAAGAGTTAGC TERM 855 730233 - 730202 - T 90 -13.2 -2.5664 | opp_overlap 730203 730210, overlap 730210 GATGCAATTATGAAC GTAAAAAAGCGACC TTTC GGTCGCTTTTTTAT TACCTAAAATCTTGT TERM 856 730203 - 730232 + T 100 -16.7 -3.0792 | opp_overlap 730202 730210, overlap 730210 ATGCAATTATGAACG TAAAAAAGCGACC TTTC GGTCGCTTTTTTA TTACCTAAAATCTTG TERM 857 730225 - 730210 - T 100 -10.4 -5.17576 | opp_overlap 730203 730210, overlap 730202 TATGAACGTAAAAAA GCGACC TTTC GGTCGC TTTTTTATTACCTAA TERM 858 730210 - 730225 + T 100 -10.4 -5.4833 | opp_overlap 730210 730202, overlap 730203 TATGAACGTAAAAAA GCGACC TTTC GGTCGC TTTTTTATTACCTAA Shewmr7_0626 733163 - 730473 - | hypothetical protein Shewmr7_0627 734145 - 733213 - | hypothetical protein TERM 859 733940 - 733926 - G 80 -2.8 -5.27477 | opp_overlap 733926 AGGGGAAGCAAAAAA TCATGG CTC CCATCA TCATGTAACCCATTA TERM 860 733965 - 733981 + g 76 -7.3 -4.37886 | CCATTAAATCTAATT GCAGATC TTG GATTTGC TTTTGTAAGCCATAG TERM 861 734451 - 734487 + r 100 -16.9 -2.52464 | opp_overlap 734460, overlap 734460 TTGGGGTTATATGGC AAATAAAAACGGCCAAT CGA ATTGGCCGTTTTTATTA TCCATTAAGCCGCGG TERM 862 734460 - 734478 + r 100 -13.2 -5.21236 | opp_overlap 734460, overlap 734451 TATGGCAAATAAAAA CGGCCAAT CGA ATTGGCCG TTTTTATTATCCATT TERM 863 734478 - 734460 - R 100 -13.2 -5.28942 | opp_overlap 734451 734460 TATGGCAAATAAAAA CGGCCAAT CGA ATTGGCCG TTTTTATTATCCATT Shewmr7_0628 734752 - 734507 - | hypothetical protein Shewmr7_0629 735075 - 735464 + | hypothetical protein TERM 864 735551 - 735570 + T 86 -12.2 -3.13164 | opp_overlap 735551 AACCACCAAGAAAAA GGCCTCAA TTGC TTGAGGCC TTAGCTGGTTAAAGA TERM 865 735570 - 735551 - T 100 -12.2 -5.16071 | opp_overlap 735551 AACCACCAAGAAAAA GGCCTCAA TTGC TTGAGGCC TTAGCTGGTTAAAGA Shewmr7_0630 737318 - 735654 - | methyl-accepting chemotaxis sensory transducer TERM 866 736954 - 736966 + g 72 -4.1 -4.77567 | TTGGTGCCGCGGGGG TCGGT CAT ATCGA TTTTATTCTGCCCCT Shewmr7_0631 737940 - 738137 + | hypothetical protein Shewmr7_0632 738313 - 740541 + | hypothetical protein TERM 867 740569 - 740600 + T 86 -11.8 -3.02371 | opp_overlap 740577, overlap 740577 AAGAATCTGATGTGT ATAAAAAAGCGAAC CTAG GTTCGCTTTTTTAA TGGTTGTTTGCCAAG TERM 868 740592 - 740577 - T 100 -9 -5.252 | opp_overlap 740569 740577 GATGTGTATAAAAAA GCGAAC CTAG GTTCGC TTTTTTAATGGTTGT TERM 869 740577 - 740592 + T 100 -9 -5.22794 | opp_overlap 740577, overlap 740569 GATGTGTATAAAAAA GCGAAC CTAG GTTCGC TTTTTTAATGGTTGT Shewmr7_0633 741535 - 740627 - | diguanylate cyclase TERM 870 740681 - 740695 + g 71 -7 -4.19472 | opp_overlap 740680, overlap 740680 CTTGGCTTGATAGAG CGCGGC ATC GGCGCG TTTTAGGGTGTCTTC TERM 871 741635 - 741648 + r 71 -3.1 -5.00616 | overlap 741633 AATTACTCCAAATCA TCTAC CCAG GTGGA TTTTTTCGAGCCAAG Shewmr7_0634 742292 - 741831 - | hypothetical protein Shewmr7_0635 744454 - 742292 - | TonB-dependent receptor TERM 872 743929 - 743954 + g 73 -6.1 -4.54047 | GGTAGCCATTTTCAC CGGCGGAGA TATCCAAC TCTGCGCCG TTTTCTGTGGGCTCG TERM 873 744873 - 744892 + G 70 -3.4 -4.7497 | overlap 744888 744890 TGGGGCTGGATTTAG CTGCGGGC GAAA GGCCACAG TTTTTAGTGCCTAAG Shewmr7_0636 744599 - 745081 + | hypothetical protein Shewmr7_0637 746090 - 745176 - | alpha/beta hydrolase domain-containing protein TERM 874 747710 - 747720 + G 71 -6.8 -4.14472 | CGTTGGCGCTCGGGT CGCT GGC AGCG TTTTACCCGTATTCC Shewmr7_0638 746393 - 747763 + | MATE efflux family protein Shewmr7_0639 748382 - 747831 - | hypothetical protein TERM 875 748103 - 748093 - G 79 -8.2 -4.41302 | opp_overlap 748099 CAGTAAAGCAATAAA GCGG TAC CCGC ATCGCAGAGTGGGTG TERM 876 748446 - 748411 - R 79 -11.2 -3.02639 | gap 1, overlap 748408 ATTGTTAAATAATGA CTCTCGCCAGCCCT-GA TAA CCGAGGGCCAGCGAGAA AGAGTGAGGATGTTA Shewmr7_0640 748891 - 748466 - | CBS domain-containing protein TERM 877 750572 - 750556 - g 76 -5.1 -4.81249 | GGCTAAATCGAAAAA TCACAAC CTA GTGGTGA TTGCCGGTGACACCC TERM 878 750640 - 750614 - g 79 -9.4 -4.26079 | opp_overlap 750612 GCAAATGAGTTAAAA GACGTCAACGGT GAT ACCGTTGGGGTC GAGTTTGCCACAAGC Shewmr7_0641 749162 - 750928 + | twin-arginine translocation pathway signal TERM 879 750999 - 751016 + F 100 -12.7 -5.28826 | TGCTCGTTCCTTGTT GGCCACC TTTG GGTGGCC TTTTTTGTACGCTTT TERM 880 751097 - 751107 + F 85 -2.4 -5.90981 | TTATGACTATAACTG CAGC ACG GCGG TTTTTTTTGGTATAA Shewmr7_0642 751275 - 751841 + | hypoxanthine-guanine phosphoribosyltransferase TERM 881 751884 - 751862 - T 100 -12.1 -5.06816 | opp_overlap 751862 ATCTGTTAATAAAAA GCGTTAGCA GTTTT TGCTAACGC TTTTTTGTTTATCGG TERM 882 751862 - 751884 + T 100 -12.8 -5.72622 | opp_overlap 751862 ATCTGTTAATAAAAA GCGTTAGCAG TTT TTGCTAACGC TTTTTTGTTTATCGG Shewmr7_0643 753195 - 751927 - | glycerophosphoryl diester phosphodiesterase TERM 883 752158 - 752174 + g 88 -3.7 -5.61596 | overlap 752159 TTTCGCGGCTTTGGC ATATTCC GAT GGAATAA TTTTTTTATCCGCAT TERM 884 752511 - 752531 + g 70 -11.1 -2.61272 | overlap 752510 752509 TGGCGGCTTTTAGCT CGGGCGTCA TTT TGACGCCAG CCTTTTTAAACATCT Shewmr7_0644 753545 - 753850 + | hypothetical protein TERM 885 753959 - 753914 - T 100 -15.7 -2.75064 | gap 1, opp_overlap 753917 753929, overlap 753881 753929 CTTGTGAGCCAATCA GCATTCAACAAAAAAGCGGACC CGA GGTCCGCTTTTTTGTTGTCT-C ACTTAAAGGAATACC TERM 886 753917 - 753957 + T 100 -18.5 -2.52676 | opp_overlap 753881 753914 753929, overlap 753929 GTGAGCCAATCAGCA TTCAACAAAAAAGCGGACC CGA GGTCCGCTTTTTTGTTGTC TCACTTAAAGGAATA TERM 887 753945 - 753929 - T 100 -13.7 -5.4833 | opp_overlap 753917 753929, overlap 753914 GCATTCAACAAAAAA GCGGACC CGA GGTCCGC TTTTTTGTTGTCTCA TERM 888 753929 - 753945 + T 100 -13.7 -5.60689 | opp_overlap 753929 753914, overlap 753917 GCATTCAACAAAAAA GCGGACC CGA GGTCCGC TTTTTTGTTGTCTCA Shewmr7_0645 754477 - 754001 - | blue (type1) copper domain-containing protein TERM 889 754642 - 754616 - R 86 -11.6 -3.25204 | opp_overlap 754615 754617, overlap 754614 754612 754617 754630 TTAGGGTGAAATAGA CTGAGTGCGACA ATT TGCCGCACTCAT GGTTATTAACGCGGC TERM 890 754641 - 754617 - R 100 -15.1 -2.54801 | opp_overlap 754615 754617, overlap 754616 754614 754612 754630 TAGGGTGAAATAGAC TGAGTGCGACA ATT TGCCGCACTCA TGGTTATTAACGCGG TERM 891 754617 - 754641 + r 95 -12.9 -2.93073 | opp_overlap 754617 754616 754614 754612 754630, overlap 754615 TAGGGTGAAATAGAC TGAGTGCGACA ATT TGCCGCACTCA TGGTTATTAACGCGG Shewmr7_0646 755559 - 754648 - | ribokinase TERM 892 755214 - 755236 + g 79 -9 -4.1585 | opp_overlap 755207, overlap 755232 TGAGATTAGCATTGG CGCCAGCGGC GAT GCCGATGGAG TTTTCGCCATTATCG rihA 756534 - 755578 - | ribonucleoside hydrolase 1 Shewmr7_0648 756736 - 758103 + | hypothetical protein TERM 893 759206 - 759194 - g 71 -6.3 -4.31379 | AGCAAGGCAGCAAAA TTACC CTA GGTAA GTCCTCCTTTGCCTT Shewmr7_0649 758107 - 759543 + | hypothetical protein TERM 894 759574 - 759597 + F 100 -11.1 -4.67353 | GTAGGGCATTTCTCA GCTGGTGAA AGTTCA TTCACCAGC TTTTTAAATCCATCA Shewmr7_0650 759790 - 760458 + | hypothetical protein TERM 895 761744 - 761762 + G 73 -10.2 -3.31263 | opp_overlap 761730 761741 761744 ATGTTCATGAGATGA CCACGGCG GCA CGCAGTGG TTATCAGCATCAGCT TERM 896 762285 - 762261 - g 84 -13.7 -3.37487 | overlap 762259 TTACACCCCGAAAGA TGTCTATGGCT TAA AGCCACAGACA GGCCGCTCCTATGAG Shewmr7_0651 760927 - 762888 + | TonB-dependent siderophore receptor TERM 897 762910 - 762940 + F 100 -14.2 -4.40333 | opp_overlap 762913 762917, overlap 762913 762917 AATTAATGCTTAACC GAATAAAGCCAGAC TCA GTCTGGCTTTATTA TTTCTGTTGTTTGGC TERM 898 762937 - 762913 - f 100 -15.9 -3.18199 | opp_overlap 762910 762913 762917, overlap 762917 TAATGCTTAACCGAA TAAAGCCAGAC TCA GTCTGGCTTTA TTATTTCTGTTGTTT TERM 899 762913 - 762937 + F 100 -15.9 -4.28819 | opp_overlap 762913 762917, overlap 762910 762917 TAATGCTTAACCGAA TAAAGCCAGAC TCA GTCTGGCTTTA TTATTTCTGTTGTTT TERM 900 762933 - 762917 - f 100 -12.3 -4.2528 | opp_overlap 762913 762910 762917, overlap 762913 GCTTAACCGAATAAA GCCAGAC TCA GTCTGGC TTTATTATTTCTGTT TERM 901 762917 - 762933 + F 100 -12.3 -4.66814 | opp_overlap 762917 762913, overlap 762913 762910 GCTTAACCGAATAAA GCCAGAC TCA GTCTGGC TTTATTATTTCTGTT Shewmr7_0652 763169 - 763897 + | putative signal transduction protein TERM 902 763942 - 763901 - T 93 -13.4 -2.71263 | gap 2, opp_overlap 763901 763905 763906 763908 763915, overlap 763915 AACCCGCTCTAAGCA CAGCTCATAAAAAAGCCTGC AATT GCAGGCTTTTTTAT--GCTG TTTTTACGGTACTAA TERM 903 763901 - 763942 + T 100 -13.4 -4.63527 | gap 2, opp_overlap 763901 763915, overlap 763905 763906 763908 763915 AACCCGCTCTAAGCA CAGCTCATAAAAAAGCCTGC AATT GCAGGCTTTTTTAT--GCTG TTTTTACGGTACTAA TERM 904 763905 - 763940 + T 100 -16.4 -3.93148 | opp_overlap 763901 763915, overlap 763901 763906 763908 763915 CGCTCTAAGCACAGC TCATAAAAAAGCCTGC AATT GCAGGCTTTTTTATGC TGTTTTTACGGTACT TERM 905 763906 - 763939 + T 100 -19.9 -2.95166 | opp_overlap 763901 763915, overlap 763905 763901 763908 763915 GCTCTAAGCACAGCT CATAAAAAAGCCTGC AATT GCAGGCTTTTTTATG CTGTTTTTACGGTAC TERM 906 763908 - 763937 + T 100 -16.7 -3.02233 | opp_overlap 763901 763915, overlap 763906 763905 763901 763915 TCTAAGCACAGCTCA TAAAAAAGCCTGC AATT GCAGGCTTTTTTA TGCTGTTTTTACGGT TERM 907 763930 - 763915 - T 100 -10.4 -5.26918 | opp_overlap 763908 763906 763905 763901 763915, overlap 763901 ACAGCTCATAAAAAA GCCTGC AATT GCAGGC TTTTTTATGCTGTTT TERM 908 763915 - 763930 + T 100 -10.4 -5.38321 | opp_overlap 763915 763901, overlap 763908 763906 763905 763901 ACAGCTCATAAAAAA GCCTGC AATT GCAGGC TTTTTTATGCTGTTT Shewmr7_0653 764859 - 763954 - | LysR family transcriptional regulator Shewmr7_0654 765060 - 767342 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 909 767413 - 767391 - T 100 -10.6 -5.45726 | opp_overlap 767391 CATAGCGTAAAAAAA CAGGGATATC TTA GGTATCCCTG TTTTTATTGGTGATT TERM 910 767391 - 767413 + T 100 -12.8 -5.16071 | opp_overlap 767391 CATAGCGTAAAAAAA CAGGGATATC TTA GGTATCCCTG TTTTTATTGGTGATT Shewmr7_0655 768142 - 767480 - | butyryl-CoA:acetate CoA transferase Shewmr7_0656 768859 - 768152 - | 3-oxoacid CoA-transferase, A subunit TERM 911 768519 - 768504 - G 70 -3.2 -4.82901 | gap 1, opp_overlap 768515, overlap 768505 768506 GTTGCGGTATAAAAA GC-CGGA ATG CCCGAGC CCGCCGCACGCATTT Shewmr7_0657 769000 - 769878 + | short-chain dehydrogenase/reductase SDR TERM 912 770027 - 770013 - f 76 -2.8 -5.27938 | ATTTTCAAACAAAAA TAACCT TAA AGGTGA TAACAATGAAATGGA TERM 913 770060 - 770087 + G 100 -7 -5.24989 | AAATCGTGTCTCGTC GCCCAATTTCTA CTCC TTGTAATTGGGC TTTTTTCATCTCTGA Shewmr7_0658 770033 - 772084 + | PHB depolymerase family esterase TERM 914 772141 - 772160 + F 100 -13.6 -5.10767 | opp_overlap 772141 AAGCTTGATAACAAA GGCGAACC TTAT GGTTCGCC TTTTTGTATTGGCTG TERM 915 772160 - 772141 - f 100 -13.6 -4.31835 | opp_overlap 772141 AAGCTTGATAACAAA GGCGAACC TTAT GGTTCGCC TTTTTGTATTGGCTG TERM 916 772513 - 772526 + G 86 -6.7 -4.96848 | opp_overlap 772512 772513 CAGTTAACGACTAAG CCATC ACAA GATGG TTTTTATATGCCCGC Shewmr7_0659 772471 - 773583 + | agmatine deiminase Shewmr7_0660 773661 - 775367 + | amidase TERM 917 775392 - 775431 + T 100 -19.6 -3.724 | opp_overlap 775392 775399, overlap 775399 CGTAAGACTGGGAAA TACAAAACGGGATGGGTA ACAA TACCCATCCCGTTTTTTA TTGTGTTACTCCATT TERM 918 775431 - 775392 - T 100 -19.6 -3.6106 | opp_overlap 775392 775399, overlap 775399 CGTAAGACTGGGAAA TACAAAACGGGATGGGTA ACAA TACCCATCCCGTTTTTTA TTGTGTTACTCCATT TERM 919 775399 - 775424 + T 100 -17.7 -5.64304 | opp_overlap 775392 775399, overlap 775392 CTGGGAAATACAAAA CGGGATGGGTA ACAA TACCCATCCCG TTTTTTATTGTGTTA TERM 920 775424 - 775399 - T 100 -17.7 -4.78848 | opp_overlap 775399 775392, overlap 775392 CTGGGAAATACAAAA CGGGATGGGTA ACAA TACCCATCCCG TTTTTTATTGTGTTA TERM 921 775522 - 775486 - T 88 -6.6 -5.09895 | opp_overlap 775492, overlap 775489 TACCGACTTAAAAAA TAAGCACCTACAAGCA TATCT TGGGTGTAGGTGCTTC GAGGGAGAGTTTGAA TERM 922 775519 - 775489 - T 91 -8.3 -4.64763 | opp_overlap 775492, overlap 775486 CGACTTAAAAAATAA GCACCTACAAGCA TATCT TGGGTGTAGGTGC TTCGAGGGAGAGTTT Shewmr7_0661 776535 - 775546 - | alpha/beta hydrolase domain-containing protein Shewmr7_0662 777713 - 776538 - | major facilitator transporter TERM 923 776739 - 776709 - G 79 -8.4 -4.2828 | opp_overlap 776708 GCTGATGGACCAAAA CAGGCTAAAAATCA CCG TGATTTTTTGACTG GTCATCTTAGGTAGC TERM 924 777041 - 777030 - G 74 -4.4 -4.80455 | TAGGCAAATATAAAA GGAT AATA ATCC TGAGTAGGTGAGGGC TERM 925 779113 - 779124 + G 73 -5.8 -4.56597 | TTGTTATCCTTTGTG CTGC TGTC GCAG TTTTTCCCCGCCGCC Shewmr7_0663 777859 - 781377 + | multi-sensor hybrid histidine kinase TERM 926 781431 - 781453 + T 91 -6.2 -5.46698 | opp_overlap 781433 781435, overlap 781433 AAGTTTTGGATAAAA AACAGTGGCT AAG AGCCACAGTG TTTTTTGGTTTTAGG TERM 927 781451 - 781433 - T 100 -8.8 -5.24129 | opp_overlap 781431 781433, overlap 781435 GTTTTGGATAAAAAA CAGTGGCT AAG AGCCACAG TGTTTTTTGGTTTTA TERM 928 781433 - 781451 + T 86 -8.8 -4.35313 | opp_overlap 781433 781435, overlap 781431 GTTTTGGATAAAAAA CAGTGGCT AAG AGCCACAG TGTTTTTTGGTTTTA TERM 929 781449 - 781435 - T 93 -10 -4.25873 | opp_overlap 781433 781431, overlap 781433 TTTGGATAAAAAACA GTGGCT AAG AGCCAC AGTGTTTTTTGGTTT Shewmr7_0664 782150 - 781479 - | two component LuxR family transcriptional regulator TERM 930 782258 - 782227 - R 100 -13.2 -3.5936 | opp_overlap 782228 782231 782234, overlap 782228 782231 782234 TTTAAAGCCGTTAAA TTAATAACCGACTC ACGG GAGTCGGTTATTAT TATGCGTCAATAACA TERM 931 782257 - 782228 - R 100 -16.7 -2.75294 | opp_overlap 782228 782231 782234, overlap 782227 782231 782234 TTAAAGCCGTTAAAT TAATAACCGACTC ACGG GAGTCGGTTATTA TTATGCGTCAATAAC TERM 932 782228 - 782257 + r 100 -16.7 -3.36878 | opp_overlap 782228 782227 782231 782234, overlap 782231 782234 TTAAAGCCGTTAAAT TAATAACCGACTC ACGG GAGTCGGTTATTA TTATGCGTCAATAAC TERM 933 782231 - 782254 + r 100 -14 -3.82378 | opp_overlap 782228 782227 782231 782234, overlap 782228 782234 AAGCCGTTAAATTAA TAACCGACTC ACGG GAGTCGGTTA TTATTATGCGTCAAT TERM 934 782254 - 782231 - R 100 -14 -3.51976 | opp_overlap 782231 782228 782234, overlap 782228 782227 782234 AAGCCGTTAAATTAA TAACCGACTC ACGG GAGTCGGTTA TTATTATGCGTCAAT TERM 935 782251 - 782234 - R 95 -11.3 -3.89354 | opp_overlap 782231 782228 782234, overlap 782231 782228 782227 CCGTTAAATTAATAA CCGACTC ACGG GAGTCGG TTATTATTATGCGTC TERM 936 782234 - 782251 + r 100 -11.3 -4.03888 | opp_overlap 782234 782231 782228 782227, overlap 782231 782228 CCGTTAAATTAATAA CCGACTC ACGG GAGTCGG TTATTATTATGCGTC Shewmr7_0665 784557 - 782281 - | TonB-dependent receptor Shewmr7_0666 785676 - 784750 - | PHB depolymerase family esterase Shewmr7_0667 786130 - 786831 + | hypothetical protein Shewmr7_0668 786843 - 787553 + | hypothetical protein Shewmr7_0669 787614 - 788375 + | two component transcriptional regulator TERM 937 788439 - 788449 + G 71 -5.4 -4.56597 | TAGGGCTAATGTTGG CACT GGG AGTG TTTTTAGAGCAAAGC TERM 938 789151 - 789137 - g 74 -4.2 -4.78107 | CAGCAGCATCAAAAA CTGGTG AAA CAACAG CTCGCGAGGCAGCAA Shewmr7_0670 788375 - 789817 + | periplasmic sensor signal transduction histidine kinase TERM 939 790001 - 790052 + T 91 -8.2 -4.70583 | gap 1, opp_overlap 790015 790016, overlap 790016 ACTAATTGAATCATT GATAAATAAAAAAACCGCGA-TGCC CTA GGCTCTCGCGTTTTTTTTATTTCGC TTTTATCTTAATGCG TERM 940 790038 - 790015 - T 95 -3 -6.02919 | gap 1, opp_overlap 790001 790016, overlap 790016 TGATAAATAAAAAAA CCGCGA-TGCC CTA GGCTCTCGCGT TTTTTTTATTTCGCT TERM 941 790016 - 790037 + T 100 -6.5 -6.23545 | gap 1, opp_overlap 790015 790016, overlap 790001 GATAAATAAAAAAAC CGCGA-TGCC CTA GGCTCTCGCG TTTTTTTTATTTCGC Shewmr7_0672 791245 - 790076 - | peptidase M50 TERM 942 790542 - 790528 - G 76 -11.4 -3.20573 | overlap 790511 790508 790526 CTACCGACATCAACA GGCCGA AGG TCGGCC CCATAATCGAGATGA TERM 943 791291 - 791280 - R 75 -7.2 -4.25104 | opp_overlap 791280, overlap 791266 TCGCTTTGAGCAAAA CGGC CTGA GCCG TGTATGACAAATTAT TERM 944 791338 - 791352 + r 77 -3.6 -5.24416 | TGAGGATATTAGCTT TTAGGA TCA TCTTAA TTTTTATTGTGATTG Shewmr7_0673 791767 - 791390 - | hypothetical protein TERM 945 791993 - 791950 - R 83 -11.8 -2.73681 | opp_overlap 791950 791951 791984 791988, overlap 791962 CATTCAGGCTAAGCA TTCACGCTAAGAGTTCACTC ACTG GAATGAACTCTTAGCGGGGG TTGATGATTGCCCCG TERM 946 791950 - 791993 + r 100 -14 -3.27298 | opp_overlap 791950 791962, overlap 791951 791984 791988 CATTCAGGCTAAGCA TTCACGCTAAGAGTTCACTC ACTG GAATGAACTCTTAGCGGGGG TTGATGATTGCCCCG TERM 947 791951 - 791992 + r 100 -15.3 -2.56164 | opp_overlap 791950 791962, overlap 791950 791984 791988 ATTCAGGCTAAGCAT TCACGCTAAGAGTTCACTC ACTG GAATGAACTCTTAGCGGGG GTTGATGATTGCCCC Shewmr7_0674 793700 - 792009 - | hypothetical protein TERM 948 792386 - 792402 + g 100 -10.9 -4.88918 | TTGCATGCACGCTCT CCTCAAG CTG CTTGAGG TTTTGTTTGAGCTCG TERM 949 794472 - 794508 + r 71 -8.8 -3.3164 | overlap 794473 GGTGATTTTAGGATG GCTCAGAATGAGGTTT TATAC ATGCCTCATTCTGAGA TTATCAAGGTCAGTT TERM 950 794473 - 794507 + r 88 -12.3 -2.58663 | overlap 794472 GTGATTTTAGGATGG CTCAGAATGAGGTTT TATAC ATGCCTCATTCTGAG ATTATCAAGGTCAGT Shewmr7_0675 795613 - 794531 - | DegS serine peptidase TERM 951 795557 - 795545 - G 91 -7.7 -5.1963 | TGTAACTAACAAAAA CATGG CCG CCATG ATAAGGCCGAAGAGC TERM 952 795693 - 795668 - R 100 -16.3 -3.85389 | opp_overlap 795673 GTTTAACAAGTTAAA GCATAGGGAAC CCGC GTTCCCTATGC TGATCCGCAGCTGAT Shewmr7_0676 797091 - 795739 - | peptidase Do TERM 953 797308 - 797320 + H 73 -5.5 -4.66953 | TAAGTGAAACCTGTG GGCTT TTA AGGCC TTTTTCAAGTCTTAG Shewmr7_0677 797498 - 798658 + | AFG1 family ATPase rplM 798955 - 799383 + | 50S ribosomal protein L13 rpsI 799398 - 799790 + | 30S ribosomal protein S9 TERM 954 799806 - 799835 + F 93 -12.3 -3.08173 | opp_overlap 799813, overlap 799813 TACGTTTTGGAATCT CAAAAAACCCAGC TTAT GCTGGGTTTTTTA TTACCTAAAATTAGT TERM 955 799828 - 799813 - f 100 -10.4 -5.09426 | opp_overlap 799806 799813 TGGAATCTCAAAAAA CCCAGC TTAT GCTGGG TTTTTTATTACCTAA TERM 956 799813 - 799828 + F 100 -10.4 -5.4833 | opp_overlap 799813, overlap 799806 TGGAATCTCAAAAAA CCCAGC TTAT GCTGGG TTTTTTATTACCTAA TERM 957 800066 - 800080 + G 78 -3.6 -5.1675 | TGGTCACTGCTGGGC TAGTCA TTT TGATTA TTTTTTCATAAATGC Shewmr7_0680 799903 - 800091 + | hypothetical protein Shewmr7_0681 800158 - 801453 + | adenylosuccinate synthetase TERM 958 801484 - 801458 - f 76 -10.8 -2.54881 | opp_overlap 801463, overlap 801425 801457 801456 CATTTAACTAAAATC GTAGAGGCCGTG TTT CACGGCCTTTTC TTCTTTTGTTGTTCC TERM 959 801463 - 801479 + F 100 -13.7 -5.14949 | opp_overlap 801458 801457 801456 AACTAAAATCGTAGA GGCCGTG TTT CACGGCC TTTTCTTCTTTTGTT Shewmr7_0682 801562 - 802218 + | Sel1 domain-containing protein Shewmr7_0683 802258 - 804684 + | RNAse R Shewmr7_0684 804685 - 805425 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 960 805440 - 805469 + T 100 -16.7 -3.50393 | opp_overlap 805447, overlap 805447 AGCGATAGTTTTCAA TAAAAAAGACGGG CTAG CCCGTCTTTTTTA TTGTCTAAAATCAGC TERM 961 805462 - 805447 - T 100 -10.4 -5.4505 | opp_overlap 805440 805447 GTTTTCAATAAAAAA GACGGG CTAG CCCGTC TTTTTTATTGTCTAA TERM 962 805447 - 805462 + T 100 -10.4 -5.60689 | opp_overlap 805447, overlap 805440 GTTTTCAATAAAAAA GACGGG CTAG CCCGTC TTTTTTATTGTCTAA Shewmr7_0685 806917 - 805487 - | major facilitator transporter Shewmr7_0686 807854 - 807099 - | hypothetical protein rpsF 808067 - 808462 + | 30S ribosomal protein S6 Shewmr7_0688 808486 - 808776 + | primosomal replication protein N rpsR 808788 - 809015 + | 30S ribosomal protein S18 rplI 809052 - 809504 + | 50S ribosomal protein L9 TERM 963 809551 - 809526 - T 80 -10.5 -3.51411 | opp_overlap 809531, overlap 809531 ACTGCTTTAAACTAA GAAAACACCGC TTCG GCGGTGTTTTT TTTATGGCTGAATTT TERM 964 809531 - 809546 + T 100 -10.4 -5.96219 | opp_overlap 809526 809531 TTTAAACTAAGAAAA CACCGC TTCG GCGGTG TTTTTTTTATGGCTG TERM 965 809546 - 809531 - T 100 -10.4 -4.84642 | opp_overlap 809531, overlap 809526 TTTAAACTAAGAAAA CACCGC TTCG GCGGTG TTTTTTTTATGGCTG TERM 966 809716 - 809690 - T 81 -5.2 -5.13343 | gap 2, opp_overlap 809690, overlap 809685 GAAGCCAAAATAAAA GCCGCTTACAGC TTAAC GCTG-A-GCGGC TTTTTTCAGGACTGC TERM 967 809690 - 809716 + T 78 -5.2 -5.02074 | gap 2, opp_overlap 809685 809690 GAAGCCAAAATAAAA GCCGCTTACAGC TTAAC GCTG-A-GCGGC TTTTTTCAGGACTGC Shewmr7_0691 811947 - 809749 - | dipeptidyl-peptidase 7 TERM 968 810097 - 810120 + g 81 -6.1 -5.01732 | gap 1, opp_overlap 810096 GTGATCGCCAAAACG CTGCTC-ATG GATTG CATCGAGCAG TTTTTTCGGAGCGTT TERM 969 812924 - 812914 - g 76 -6.8 -4.58773 | TCGACCAAACCAAAA TCCG TAC CGGA CAGCTGGATGATGAG Shewmr7_0692 812073 - 813479 + | primary replicative DNA helicase alr 813555 - 814631 + | alanine racemase TERM 970 814671 - 814696 + T 100 -16.3 -5.28942 | GGCGCATTTGCGTAA TGCCGTTCACT TAAG AGTGAACGGCA TTTTTCTTTGGCCTA TERM 971 815417 - 815445 + T 73 -9.7 -3.04398 | opp_overlap 815421, overlap 815416 815421 TGATTGGGAATGCTA GAAATGAGCTGAG AGG CTAAGTTCATTTC ATTTTCGGCAACCGA TERM 972 816006 - 816038 + T 83 -12.2 -2.78032 | opp_overlap 816011, overlap 816011 CTGAGAGTTGCATAA AAAAATCCGATGAC ATGAG GTCATCGGATTTTG ATCTTTTCAGCGAGA TERM 973 816033 - 816011 - T 100 -12.1 -5.61596 | opp_overlap 816006 816011 AGTTGCATAAAAAAA TCCGATGAC ATGAG GTCATCGGA TTTTGATCTTTTCAG TERM 974 816011 - 816033 + T 100 -12.1 -4.55826 | opp_overlap 816011, overlap 816006 AGTTGCATAAAAAAA TCCGATGAC ATGAG GTCATCGGA TTTTGATCTTTTCAG TERM 975 816086 - 816101 + T 71 -2.4 -5.24129 | overlap 816087 816088 TTAACTGATCGGCAT TAGCGC ATTT GCGCCG TTTTTTATGGCCAAA Shewmr7_0696 816704 - 816240 - | putative chemotaxis protein CheX TERM 976 817955 - 817987 + G 71 -7.5 -4.05788 | overlap 817967 CGCGATGAAGTCACG GGTAACCGTTGGGGC GTA GCGCCTTCGGTGACC TTTGGTTTAACCACG Shewmr7_0697 817262 - 819457 + | TonB-dependent siderophore receptor TERM 977 819481 - 819498 + F 100 -12.7 -4.05181 | overlap 819475 AATCGAGATCTGAAT GGCAGCC CTAG GGCTGCC TTTGATGTTTATGCT Shewmr7_0698 819533 - 820207 + | putative hydroxylase TERM 978 820323 - 820300 - T 100 -9.7 -4.64676 | opp_overlap 820300 TGAGGGGCAATAAAA CAGTAAACG TTAGCT CGTTTACTG TTTTTGTATTTTTAC TERM 979 820300 - 820323 + T 100 -9.7 -5.36364 | opp_overlap 820300 TGAGGGGCAATAAAA CAGTAAACG TTAGCT CGTTTACTG TTTTTGTATTTTTAC Shewmr7_0699 821138 - 820623 - | hypothetical protein Shewmr7_0700 821933 - 821166 - | bacteriophage CI repressor TERM 980 821803 - 821841 + g 72 -4.1 -4.87626 | gap 1, overlap 821815 GTTTCACCGCCGTCG TACTCAGGTATAGAATTC AAAG GAATTCTGAAT-TGAGTA TTTTTAATATTGACA Shewmr7_0701 821948 - 822178 + | hypothetical protein Shewmr7_0702 822232 - 822795 + | phage regulatory CII family protein Shewmr7_0703 822812 - 823075 + | hypothetical protein TERM 981 823270 - 823258 - g 70 -3.4 -4.80882 | opp_overlap 823252 AGCCCACAGCAAAAA GCAA TTTTG TTGC TCGCAGCCAGTTTAC TERM 982 823492 - 823474 - g 76 -5.9 -4.74132 | overlap 823477 823486 ACAGGCCAGCAAAAA GCAGCGC AGCAA GCGCCAC AGCGCCAAGACGTTA Shewmr7_0704 823087 - 823581 + | hypothetical protein TERM 983 823615 - 823590 - f 100 -11.9 -4.70319 | GCACTAAAAGTAAAA GCCACAACCGC GGTA ACGATTGTGGC CCATATCATTCAATG Shewmr7_0705 823642 - 823881 + | hypothetical protein Shewmr7_0706 823881 - 824165 + | hypothetical protein TERM 984 824433 - 824417 - g 76 -5.1 -4.84529 | CGAGAAATGGAAAAA GCCTC AAACGCG GAGGC TATAGCATGAGCACC Shewmr7_0707 824162 - 824443 + | hypothetical protein TERM 985 824597 - 824583 - g 82 -7.8 -4.72029 | GGTAAGCGAAGAAAA GCGCAT ATC ACGCGC GCGTACTCGCCAAAT Shewmr7_0708 824440 - 824676 + | hypothetical protein Shewmr7_0709 824673 - 824993 + | hypothetical protein Shewmr7_0710 825004 - 825597 + | hypothetical protein Shewmr7_0711 825608 - 826174 + | hypothetical protein TERM 986 826220 - 826201 - g 77 -10.7 -3.61268 | opp_overlap 826200 826199 826201 GATTTAATCCGTAAA GCCGCGA TTAATG TCGCGGC GATTTTTACGCGGCC TERM 987 826201 - 826220 + G 70 -11.4 -2.60032 | opp_overlap 826201, overlap 826200 826199 GATTTAATCCGTAAA GCCGCGAT TAAT GTCGCGGC GATTTTTACGCGGCC TERM 988 826394 - 826378 - g 70 -9.3 -3.53091 | opp_overlap 826386 ATTTGGCTGCGTAAA CGCTGCG CCT CGCTGCG CCAGATTATGCAGCA TERM 989 827964 - 827951 - g 74 -8.1 -4.07687 | ATTTGGCTTCTAAAA GCGGT GACA ACCGC GCACCTTGGAGCTCT Shewmr7_0712 826174 - 828522 + | bacteriophage replication gene A TERM 990 828658 - 828673 + G 72 -4 -4.82901 | gap 1 CGCCTGCGAAAAGTG CGCCGAT GAA AT-GGCG TTTTTATACAGCACA Shewmr7_0713 828509 - 828769 + | hypothetical protein Shewmr7_0714 828756 - 829007 + | hypothetical protein TERM 991 829309 - 829291 - g 74 -2.3 -5.16572 | opp_overlap 829293, overlap 829293 AGCCAAGCCAAAAAA GACGCGC TAAGG GCGTATC TCGTCGATGGCCTGC TERM 992 829347 - 829332 - g 85 -11.8 -3.72576 | TGGCCTGCCAGCAAA GCGCGC CTAT GCGCGC TATGGGGTAACGCAA Shewmr7_0715 829204 - 829557 + | hypothetical protein TERM 993 829593 - 829570 - f 82 -8.3 -4.28375 | TGAACACATTGAAAA TTCACACTA GAAAAG TAGTGTGAA AAAATAGGTGTTATC Shewmr7_0716 829677 - 829985 + | hypothetical protein TERM 994 830003 - 830018 + T 100 -10.4 -4.28254 | opp_overlap 830003 TAAAACTAACAAAAA GCCCTC AATC GAGGGC TTTTAACTCTTCGCG TERM 995 830018 - 830003 - T 100 -10.4 -5.28166 | opp_overlap 830003 TAAAACTAACAAAAA GCCCTC AATC GAGGGC TTTTAACTCTTCGCG Shewmr7_0717 830336 - 830046 - | XRE family transcriptional regulator TERM 996 830143 - 830115 - G 73 -11.8 -2.53715 | overlap 830114 CTTATCATCAGTAAG TTTTGGCGCTTC ATTCG GTAGCGCCAAAA TCTCCGAGGCATCCG Shewmr7_0718 830905 - 830657 - | phage transcriptional activator, Ogr/delta TERM 997 831005 - 830990 - R 89 -10.4 -4.00532 | TTTTTAAACAGTAAA GCCCTC AATT GAGGGC TTACGCAAATACTTA Shewmr7_0719 832080 - 831034 - | PBSX family phage portal protein Shewmr7_0720 833870 - 832062 - | hypothetical protein TERM 998 833982 - 833960 - H 81 -9.3 -3.88583 | overlap 833977 833979 TAAATTTCCTATAAA TTCCGATTT AGCAA AAATCGGAA TCATGCCGAAGTTTG TERM 999 833991 - 833977 - H 71 -4.2 -4.7497 | overlap 833960 833979 CCGATTTAGCAAAAA TCGGAA TCA TGCCGA AGTTTGCCGCGTGAT Shewmr7_0721 834074 - 835015 + | phage capsid scaffolding TERM 1000 835687 - 835661 - g 79 -9.4 -4.26344 | overlap 835680 ACAGGCCCATTAAAA GACGGCGAGTAT AAA ACACTCGACGCC ATCGTCACCGAAATC Shewmr7_0722 835070 - 836092 + | P2 family phage major capsid protein TERM 1001 836142 - 836110 - f 76 -7.7 -4.20531 | opp_overlap 836111, overlap 836111 836113 CATAGGGACGTAAAA CCAGCCTAGGCAC CTAACCC GTGCCTAGGCCAT GTATACCAACCAATG TERM 1002 836141 - 836111 - f 79 -11.2 -3.11836 | opp_overlap 836111, overlap 836110 836113 ATAGGGACGTAAAAC CAGCCTAGGCAC CTAACCC GTGCCTAGGCCA TGTATACCAACCAAT TERM 1003 836139 - 836113 - f 100 -13.8 -3.11476 | opp_overlap 836111, overlap 836111 836110 AGGGACGTAAAACCA GCCTAGGCAC CTAACCC GTGCCTAGGC CATGTATACCAACCA TERM 1004 836582 - 836565 - g 75 -9.1 -3.86015 | overlap 836552 GATGCCGCCGATAAA GTCAGCG ACTC CGCCGAC AAGGTGAGCACCGCC Shewmr7_0723 836193 - 836795 + | hypothetical protein Shewmr7_0724 837017 - 837475 + | putative phage gene TERM 1005 837831 - 837853 + G 88 -10.6 -4.25104 | overlap 837832 GACGTCCACTTTACC CTAGGCGCTA GCC TAGCGCCTAA TTTTAGTGCGCAGCA TERM 1006 837832 - 837852 + G 86 -14.1 -3.14848 | overlap 837831 ACGTCCACTTTACCC TAGGCGCTA GCC TAGCGCCTA ATTTTAGTGCGCAGC Shewmr7_0725 837603 - 838064 + | hypothetical protein Shewmr7_0726 838061 - 838528 + | hypothetical protein TERM 1007 838623 - 838602 - g 80 -4.4 -5.15634 | overlap 838603 838604 TATGCCAGCAAAAAA GCGCCA GCGCATCTTA TGGCGC ATGGCCGACTTAATT TERM 1008 838661 - 838644 - g 85 -7.7 -4.88407 | CGACTTAATTAAAAA GCGTTCG CAAT CAAACGC AAAAGGCCAAAAAAA Shewmr7_0727 838525 - 839247 + | putative phage gene TERM 1009 839621 - 839639 + G 71 -6.7 -4.1673 | gap 1 CTACTGCCTAAGTCT GCGCGCCA GCCA TGGC-CGC TTTGTTAACGCATTA Shewmr7_0728 839250 - 840356 + | hypothetical protein Shewmr7_0729 840369 - 840818 + | prophage PSPPH06, putative tail tube protein Shewmr7_0730 840836 - 841042 + | TraR/DksA family transcriptional regulator Shewmr7_0731 841039 - 841224 + | hypothetical protein TERM 1010 841568 - 841543 - g 77 -9.7 -3.6715 | overlap 841536 CGACTTAAGCGTAAA GCACCAAATGC TAAC GCAACTGGTGC AACGCTATAACCGCG Shewmr7_0732 841259 - 841816 + | pesticin domain-containing protein Shewmr7_0733 841813 - 842391 + | hypothetical protein TERM 1011 842617 - 842605 - g 72 -4.1 -4.81249 | CGGCAAATGGAAAAA GGCTT TGA AAACC TAAAAGATTTTTTAA Shewmr7_0734 842395 - 842661 + | hypothetical protein Shewmr7_0735 842658 - 842924 + | hypothetical protein TERM 1012 842957 - 842929 - f 79 -11.2 -2.95322 | gap 1, overlap 842926 TAAAAAAATAGAGGA GCTGAT-TGAGTC CATC GACTCAAATCAGC TTGAACAAATGTTCA Shewmr7_0736 843121 - 844869 + | TP901 family phage tail tape measure protein Shewmr7_0737 844866 - 845201 + | hypothetical protein Shewmr7_0738 845201 - 846403 + | putative bacteriophage protein Shewmr7_0739 846400 - 847038 + | hypothetical protein Shewmr7_0740 847056 - 849470 + | hypothetical protein TERM 1013 849734 - 849717 - f 90 -5.7 -5.5112 | CTTATGAAGAAAAAA TAAAGAT GAAT ATCTTTA TTAGCGGGATTGGAA TERM 1014 849833 - 849812 - g 74 -11.5 -3.08996 | overlap 849824 TACCGCCAGCCAAGA GCTGGCGAC AGAG GACGCCAGC GGCCAAAGCTCAAGC Shewmr7_0741 849750 - 850277 + | hypothetical protein Shewmr7_0742 850277 - 850966 + | hypothetical protein TERM 1015 851573 - 851589 + G 70 -11.5 -2.59748 | opp_overlap 851545 851568 851573, overlap 851569 TACCATCAAACTTAA CGGCGGC TCG GCCGTCG TCACTTGTGCCCATA Shewmr7_0743 850971 - 851666 + | hypothetical protein Shewmr7_0744 851677 - 851874 + | hypothetical protein TERM 1016 851895 - 851914 + T 89 -6.4 -5.38054 | opp_overlap 851882 851895 AAGCTCAACGCATAA GCCCAG CCACAGCA CTGGGC TTTTTGTTTCTGCAG TERM 1017 852390 - 852355 - T 91 -6.4 -5.51353 | TAAAAATAATAAAAA GATCTAGTTAAG TAAAATCAATGC CTTAACTAGATC AAAAACTGAAATGAA Shewmr7_0745 853480 - 852407 - | phage integrase family protein TERM 1018 853411 - 853456 + g 82 -7.7 -4.68593 | CGCCATTCTCTTTAA CGCGCACAGTGC-AACGGTAA CTAAAA TCACCGTTAGC-CTTTGCGCG TTTTTCAATAGTAAA Shewmr7_0746 853591 - 854613 + | tRNA-dihydrouridine synthase A TERM 1019 854647 - 854657 + F 73 -5.4 -4.60924 | GGTGAGATTGACTAT TGCT TGT AGCA TTTTTAACCACTTTA Shewmr7_0747 854822 - 855115 + | hypothetical protein Shewmr7_0748 855261 - 855461 + | phage shock protein C, PspC TERM 1020 855568 - 855551 - T 70 -7.7 -3.73534 | gap 1 GAATGCTATCAACAA GAGGG-CG CAT CGACCCTC ATGCCAATAGTGAAC TERM 1021 855593 - 855603 + T 70 -5.4 -4.56597 | opp_overlap 855583 GTGAACACTGTTTAA GTGA GTA TCAC TTTTTAAGAAAAGCC Shewmr7_0749 856337 - 855600 - | enoyl-CoA hydratase Shewmr7_0750 856372 - 856854 + | hypothetical protein TERM 1022 857661 - 857648 - g 84 -2.3 -5.63236 | overlap 857649 ATTGAAAAAGAAAAA TGCTG AGGT CAGCC TGAAACAGATCATTC Shewmr7_0751 856866 - 857834 + | hypothetical protein Shewmr7_0752 857879 - 858574 + | hypothetical protein TERM 1023 858594 - 858634 + T 76 -10.6 -2.95068 | opp_overlap 858595 858607, overlap 858607 TAACGCTAATGAATC AGTCATAAAAAAACCGCC ATTTA GGCGGTTTTTTTATGGGA TGTATCGCTATCTTA TERM 1024 858633 - 858595 - T 83 -11.9 -2.84841 | opp_overlap 858594 858607, overlap 858607 AACGCTAATGAATCA GTCATAAAAAAACCGCC ATTTA GGCGGTTTTTTTATGGG ATGTATCGCTATCTT TERM 1025 858607 - 858621 + T 100 -8.5 -5.626 | opp_overlap 858607 858595, overlap 858594 TCAGTCATAAAAAAA CCGCC ATTTA GGCGG TTTTTTTATGGGATG TERM 1026 858621 - 858607 - T 100 -8.5 -5.64274 | opp_overlap 858594 858607, overlap 858595 TCAGTCATAAAAAAA CCGCC ATTTA GGCGG TTTTTTTATGGGATG tolC 859954 - 858647 - | outer membrane channel protein TERM 1027 859851 - 859837 - G 73 -11.4 -3.01712 | opp_overlap 859831 CTTGCGCTTGTAATA CGAGCG GGT CGCTCG TCAGTGCTTGTTGAT TERM 1028 859991 - 859976 - H 76 -7.6 -4.08706 | opp_overlap 859975 TCCTTATTAGACAAA TTCTCC AAAA GGAGAA ATATGTAACTTCGTT Shewmr7_0754 860198 - 860809 + | nucleoside diphosphate pyrophosphatase Shewmr7_0755 860871 - 861254 + | hypothetical protein Shewmr7_0756 861270 - 862109 + | calcineurin phosphoesterase C-terminal domain-containing protein Shewmr7_0757 862136 - 862711 + | hypothetical protein Shewmr7_0758 862768 - 864654 + | DNA topoisomerase IV subunit B TERM 1029 865073 - 865083 + G 76 -5.4 -4.78753 | opp_overlap 865073 GTTGCAACCGAAAAC CGTA TCG TACG TTTTATTGATATTGA Shewmr7_0759 864707 - 865882 + | L-sorbosone dehydrogenase, putative TERM 1030 866161 - 866171 + G 74 -6.8 -4.28762 | AGGCTATGGTACTGA TGGC GCA GCCA TTTTCATACCGTTAT Shewmr7_0760 865875 - 868151 + | DNA topoisomerase IV subunit A TERM 1031 868190 - 868214 + T 100 -7.9 -5.252 | opp_overlap 868191, overlap 868191 TGCACAAGAATTAAA ACCACTTAAGT GTC ACTTGAGTGGC TTTTTTATGACAATC TERM 1032 868191 - 868213 + T 95 -11.4 -3.74397 | opp_overlap 868191, overlap 868190 GCACAAGAATTAAAA CCACTTAAGT GTC ACTTGAGTGG CTTTTTTATGACAAT TERM 1033 868213 - 868191 - T 100 -9.2 -4.59414 | opp_overlap 868190 868191 GCACAAGAATTAAAA CCACTTAAGT GTC ACTTGAGTGG CTTTTTTATGACAAT TERM 1034 868283 - 868266 - T 100 -11.3 -5.81412 | opp_overlap 868266 TTGAGGTAAAAAAAA CCTACCG CAGG CGGTAGG TTTTTTTCGCTAATA TERM 1035 868266 - 868283 + T 100 -11.3 -5.48825 | opp_overlap 868266 TTGAGGTAAAAAAAA CCTACCG CAGG CGGTAGG TTTTTTTCGCTAATA Shewmr7_0761 869373 - 868312 - | porin TERM 1036 868737 - 868747 + g 71 -5.4 -4.49756 | TGTTGTAAGCAACTG CTAC ATA GTAG TTTTGCTCTTTAAAC TERM 1037 869007 - 869027 + g 86 -8.3 -4.60041 | opp_overlap 869011 TGTCGTTACGACCCA CTAACACAG TAC CTGCGTTAG TTTTTAAACCTAAGT TERM 1038 869405 - 869417 + r 71 -3.4 -5.07941 | AACCTAAGTTCTTAT CCAT TTTTC ATGG TTTTTGTGTGGTTTT TERM 1039 869768 - 869741 - R 100 -15.8 -3.62616 | opp_overlap 869748, overlap 869748 TAGTACGAGATACAA TAAAAAAGCGGC CAAA GCCGCTTTTTTA TCAAATACTATCTCT TERM 1040 869761 - 869748 - R 100 -9.5 -5.62045 | opp_overlap 869748, overlap 869741 AGATACAATAAAAAA GCGGC CAAA GCCGC TTTTTTATCAAATAC TERM 1041 869748 - 869761 + r 100 -9.5 -5.26316 | opp_overlap 869748 869741 AGATACAATAAAAAA GCGGC CAAA GCCGC TTTTTTATCAAATAC Shewmr7_0762 870868 - 869804 - | outer membrane porin, putative TERM 1042 871153 - 871168 + H 81 -5.4 -5.09895 | CTTGGCATACCTAGA CCGAGA TAGA TTTCGG TTTTTTGCCTAAATC Shewmr7_0763 871286 - 872104 + | UBA/THIF-type NAD/FAD binding protein TERM 1043 872148 - 872167 + T 100 -12.2 -5.33405 | opp_overlap 872148 CTTTAACAACAAAAA TCCACAGC CATT GCTGTGGA TTTTTGTTTAGTGGC TERM 1044 872167 - 872148 - T 100 -12.2 -5.29445 | opp_overlap 872148 CTTTAACAACAAAAA TCCACAGC CATT GCTGTGGA TTTTTGTTTAGTGGC Shewmr7_0764 873881 - 872250 - | periplasmic sensor signal transduction histidine kinase TERM 1045 872634 - 872663 + g 70 -10.1 -3.29613 | overlap 872645 CAGGCTAACATTGGT TTGGATGTTGAGC GCTG GCTCAACCTCTAA TTGGGTTTGCGCTTT TERM 1046 872764 - 872779 + g 86 -9 -4.4874 | TGTTCTTCATGGCTA CGATCG ATGG CGATCG TTTTAAATTTTTGGA Shewmr7_0765 874049 - 874660 + | hypothetical protein TERM 1047 874722 - 874702 - f 100 -14.1 -5.29782 | CACAGGCACAAAAAA TGGGGGTTA GCT TAACCCCCA TAACAACGTGCAATT TERM 1048 875148 - 875138 - f 78 -4 -5.1861 | TCGAGTACGAAAAAA TCAT TAA ATGA TACAAAGATCCGCGG TERM 1049 875244 - 875223 - g 74 -3.7 -5.04175 | overlap 875202 875225 TGAAGGAGACAAAAA TGGCTGACA TCAG TGTCAACAA AGGCAGCATGGGATA Shewmr7_0766 875222 - 876811 + | methyl-accepting chemotaxis sensory transducer TERM 1050 877007 - 876987 - T 86 -11.9 -2.90714 | overlap 876989 877002 TGAAATCGGTAGACA CAGCGGATT CAA AATCCGCCG CCCTTAAAAGCGTGA TERM 1051 877005 - 876989 - T 79 -10.9 -3.00215 | overlap 876987 877002 AAATCGGTAGACACA GCGGATT CAA AATCCGC CGCCCTTAAAAGCGT TERM 1052 877070 - 877084 + T 91 -3.5 -5.76633 | overlap 877062 CCAAAGGGACACAAA CCGAC CTAGA GTTGG TTTTTTTGTGTCTGA modC 878206 - 877121 - | molybdate transporter ATP-binding protein TERM 1053 877792 - 877807 + g 71 -5.4 -4.56597 | TGAGTAGGGCACGGC CAATGG CAAC CCGTTG TTTTTCGCCACCAGA modB 878937 - 878200 - | molybdate ABC transporter permease protein Shewmr7_0769 879722 - 878937 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 1054 879777 - 879744 - H 71 -4 -4.82901 | opp_overlap 879748, overlap 879745 CCTCCGTGATAAAAA GTGATCGTTATATA CCAATC TATATATCGATCAT TCAAGTCCCGATGCG TERM 1055 880638 - 880655 + G 71 -6.3 -4.35581 | opp_overlap 880635, overlap 880635 CGACATCCAAACGCT CAAGGTT GGTG AGCCTTG TTTTGCCTGTTTTGA Shewmr7_0770 879925 - 880704 + | ModE family transcriptional regulator Shewmr7_0771 881897 - 880722 - | putative iron-sulfur cluster binding protein Shewmr7_0772 882142 - 882858 + | extracellular solute-binding protein Shewmr7_0773 884800 - 882860 - | diguanylate cyclase TERM 1056 883833 - 883822 - G 70 -3 -4.82901 | TTTTCCCCATAAAAA GTTT CATA AAAC TATAAGACCCAGGCT TERM 1057 884068 - 884090 + g 100 -15 -5.08824 | TATCCGAGGTGACAC TGGCAACTTG ATC CAAGTTGCCA TTTTTTAAATAGAGA Shewmr7_0774 884915 - 885442 + | phosphoesterase, PA-phosphatase related Shewmr7_0775 885467 - 885901 + | hypothetical protein TERM 1058 885946 - 885966 + T 100 -12.6 -4.73682 | GGTTGACAGTTTTTA GGCCAGCT CCAGT AGCTGGCC TTTTCTATTGTGCAC Shewmr7_0776 886746 - 885943 - | integrase catalytic subunit TERM 1059 886177 - 886157 - G 79 -11.1 -3.54029 | opp_overlap 886160 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTAGGCTCGCCTGA TERM 1060 886452 - 886502 + g 70 -2.6 -5.01546 | gap 1, opp_overlap 886469 CATCATGCAGTCCTT CCTCTTTCAGCAGAT-TAGGATG CTTCTT CATCCAGTGTTTGCTGAACGTGG TTTTTGTGTAGCTTT Shewmr7_0777 887171 - 886776 - | transposase TERM 1061 887209 - 887264 + r 100 -20.8 -2.73875 | opp_overlap 887222 887228, overlap 887211 887213 887228 CGTATTTCAGGACTA GACATTGACTCAATAAAAAGCCCGTC GATT GACGGGCTTTTTATTGGAATAATGTC TGATCTTAGAAAGAC TERM 1062 887211 - 887262 + r 100 -17.6 -2.9155 | opp_overlap 887222 887228, overlap 887209 887213 887228 TATTTCAGGACTAGA CATTGACTCAATAAAAAGCCCGTC GATT GACGGGCTTTTTATTGGAATAATG TCTGATCTTAGAAAG TERM 1063 887213 - 887260 + r 100 -14.4 -3.00923 | opp_overlap 887222 887228, overlap 887211 887209 887228 TTTCAGGACTAGACA TTGACTCAATAAAAAGCCCGTC GATT GACGGGCTTTTTATTGGAATAA TGTCTGATCTTAGAA TERM 1064 887251 - 887222 - R 100 -18.1 -3.09491 | opp_overlap 887213 887211 887209 887228, overlap 887228 TAGACATTGACTCAA TAAAAAGCCCGTC GATT GACGGGCTTTTTA TTGGAATAATGTCTG TERM 1065 887228 - 887245 + r 100 -12.7 -5.08601 | opp_overlap 887222 887228, overlap 887213 887211 887209 TTGACTCAATAAAAA GCCCGTC GATT GACGGGC TTTTTATTGGAATAA TERM 1066 887245 - 887228 - R 100 -12.7 -5.10461 | opp_overlap 887228 887213 887211 887209, overlap 887222 TTGACTCAATAAAAA GCCCGTC GATT GACGGGC TTTTTATTGGAATAA Shewmr7_0778 888958 - 887270 - | malate dehydrogenase TERM 1067 888501 - 888522 + g 76 -2.9 -5.18355 | AAGCCTAAGATGCGC TCACCGTCG GTCA CAACGATGA TTTTTACTTTTTGGC TERM 1068 889064 - 889075 + r 75 -2.2 -5.40072 | overlap 889055 TTGCCTGTGTCTTAC GCTA TTTG TGGC TTTTTTTGCAGCAGA TERM 1069 889138 - 889156 + r 70 -7.4 -3.90744 | opp_overlap 889138, overlap 889146 TAATTGATTGTAAAA GCATTTGC CAA GCAAAAGC TTGTTTAACGGCGAG TERM 1070 889156 - 889138 - R 73 -7.4 -4.15453 | opp_overlap 889138 889146 TAATTGATTGTAAAA GCATTTGC CAA GCAAAAGC TTGTTTAACGGCGAG TERM 1071 889186 - 889201 + r 91 -10.4 -4.208 | opp_overlap 889186 GGTAAAAACAAAAAA CGCAGC CTAG GCTGCG TTTGTGATTTTAAGC TERM 1072 889201 - 889186 - R 100 -10.4 -5.93252 | opp_overlap 889186 GGTAAAAACAAAAAA CGCAGC CTAG GCTGCG TTTGTGATTTTAAGC Shewmr7_0779 889697 - 889227 - | hypothetical protein Shewmr7_0780 891129 - 889843 - | putative manganese transporter Shewmr7_0781 891755 - 891213 - | membrane-flanked domain-containing protein TERM 1073 892776 - 892787 + G 73 -5.8 -4.48299 | overlap 892772 CGATCGTGCAACGGC CAGC GGCA GCTG TTTATTTGACTATGG Shewmr7_0782 891955 - 894540 + | TonB-dependent receptor TERM 1074 894568 - 894583 + F 100 -8.2 -5.63645 | opp_overlap 894568 894569, overlap 894569 TGCACTATTCGATAA TGGCGC TTCG GCGCCG TTTTTTGTCTTTTAC TERM 1075 894569 - 894582 + F 83 -9.5 -3.95747 | opp_overlap 894569 894568, overlap 894568 GCACTATTCGATAAT GGCGC TTCG GCGCC GTTTTTTGTCTTTTA Shewmr7_0783 894660 - 895289 + | glutathione S-transferase domain-containing protein TERM 1076 895343 - 895311 - T 100 -13.6 -5.31456 | opp_overlap 895316, overlap 895316 CTAAGCGATAAAAAA CAAAAGGGCAGAAG ATTTA CTTCTGCCCTTTTT GATGAAGTCGTTTAG TERM 1077 895338 - 895316 - T 100 -13.5 -5.49579 | opp_overlap 895316, overlap 895311 CGATAAAAAACAAAA GGGCAGAAG ATTTA CTTCTGCCC TTTTTGATGAAGTCG TERM 1078 895316 - 895338 + T 100 -13.5 -4.7373 | opp_overlap 895316 895311 CGATAAAAAACAAAA GGGCAGAAG ATTTA CTTCTGCCC TTTTTGATGAAGTCG TERM 1079 895375 - 895393 + T 82 -10.2 -3.5936 | GTTTATAGTTGAGTC GCCGCCCA TTT TGCGCGGC TTTCACGGCTTTCGC Shewmr7_0784 895862 - 895362 - | hypothetical protein Shewmr7_0785 896311 - 895904 - | hypothetical protein TERM 1080 896505 - 896473 - R 100 -13.6 -5.00616 | gap 1 TGGCTCCGTAAAAAA GCGCTGGC-ATCTGT TTTC ACAAATAGCCAGCGC AACAGTGGAAGTGGT Shewmr7_0786 897344 - 896559 - | hypothetical protein TERM 1081 897764 - 897739 - R 100 -12.6 -5.40072 | opp_overlap 897739 897760, overlap 897741 TCGCGCCTAAAAAAA TAGCGCCGCT ATTGTG AGCGGCGCCA TTGGGGTTATTTACT TERM 1082 897762 - 897741 - R 100 -13 -4.34482 | opp_overlap 897739 897760, overlap 897739 GCGCCTAAAAAAATA GCGCCGCT ATTGTG AGCGGCGC CATTGGGGTTATTTA Shewmr7_0787 899886 - 897802 - | endothelin-converting protein 1 Shewmr7_0788 900224 - 900931 + | ribosomal small subunit pseudouridine synthase A TERM 1083 900939 - 900983 + T 100 -11.6 -4.00038 | opp_overlap 900951, overlap 900941 900951 CGATTTAACACCATT TGGCTAAAAAAATGCCGCTT CTGAT GAGCGGCATTTTTATTGCTA TTTATACTGCTACTA TERM 1084 900941 - 900981 + T 93 -12 -3.58864 | opp_overlap 900951, overlap 900939 900951 ATTTAACACCATTTG GCTAAAAAAATGCCGCTT CTGAT GAGCGGCATTTTTATTGC TATTTATACTGCTAC TERM 1085 900971 - 900951 - T 100 -8.3 -5.40474 | opp_overlap 900941 900939 900951 ATTTGGCTAAAAAAA TGCCGCT TCTGATG AGCGGCA TTTTTATTGCTATTT TERM 1086 900951 - 900971 + T 100 -9 -5.20606 | opp_overlap 900951, overlap 900941 900939 ATTTGGCTAAAAAAA TGCCGCTT CTGAT GAGCGGCA TTTTTATTGCTATTT Shewmr7_0789 901972 - 901016 - | hypothetical protein Shewmr7_0790 902544 - 901969 - | hypothetical protein Shewmr7_0791 903077 - 902544 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1087 903302 - 903289 - H 70 -3.7 -4.74706 | CGTAATAGCTAAAAA GCGTG ATTG CTCGC TCGCTATGTTAAGCA TERM 1088 903406 - 903390 - H 77 -3.7 -5.14682 | opp_overlap 903403 GCACAATAAATAAAA GATAAAC TTT GTATATC AGGGATATTTTGCTG Shewmr7_0792 903479 - 905341 + | methyl-accepting chemotaxis sensory transducer TERM 1089 905379 - 905364 - T 86 -10.4 -3.85698 | opp_overlap 905364 TTTGTCTGTCAGAAA CGCACC TTAG GGTGCG TTTTTTATGGCGAAG TERM 1090 905364 - 905379 + T 100 -10.4 -5.24129 | opp_overlap 905364 TTTGTCTGTCAGAAA CGCACC TTAG GGTGCG TTTTTTATGGCGAAG TERM 1091 905510 - 905481 - T 100 -14.5 -3.28857 | opp_overlap 905488, overlap 905488 GATAAAACCCACCAA CAAAAAACGCACC CTAA GGTGCGTTTTTTA TGCAAAGCGCCGCGA TERM 1092 905503 - 905488 - T 100 -10.4 -5.5112 | opp_overlap 905488, overlap 905481 CCCACCAACAAAAAA CGCACC CTAA GGTGCG TTTTTTATGCAAAGC TERM 1093 905488 - 905503 + T 100 -10.4 -5.24129 | opp_overlap 905488 905481 CCCACCAACAAAAAA CGCACC CTAA GGTGCG TTTTTTATGCAAAGC Shewmr7_0793 906473 - 905526 - | ribose-phosphate pyrophosphokinase TERM 1094 905744 - 905759 + g 71 -6.8 -4.19577 | opp_overlap 905744 905742, overlap 905730 TCGCGTAAGCAAATA CGCGGT TTGC ACCGTG TTCTTTTAAGGCTTC Shewmr7_0794 907440 - 906586 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Shewmr7_0795 908086 - 907442 - | outer membrane lipoprotein LolB TERM 1095 908438 - 908423 - g 71 -6.2 -4.36914 | TCTCTCCGGACAAAA TTCATG ATGC CATGAA GAGTCTGGCCAGTCG hemA 908341 - 909591 + | glutamyl-tRNA reductase TERM 1096 910431 - 910409 - g 73 -3.3 -4.95155 | opp_overlap 910412, overlap 910410 TTCACAGCATAAAAA CCGCGCTCA AGCGA TGAGCGTGT TAGCCGCGCGTATCC TERM 1097 910477 - 910466 - g 76 -7.2 -4.4261 | overlap 910467 CGTTGAAGACGAAAA GCGC CGCA GCGC CGAAGAGTCGACTCG prfA 909606 - 910697 + | peptide chain release factor 1 TERM 1098 910761 - 910790 + G 79 -8.6 -4.34947 | overlap 910785 TACAGCTTGCGCCTA CCTCTGAATCCG CCCATC TGGATGCAGAGG TTTTCCTGCTGTATT Shewmr7_0798 910700 - 911560 + | HemK family modification methylase TERM 1099 911617 - 911593 - T 77 -8.6 -4.04927 | opp_overlap 911593 CTAAGCACTAAACAA CGCCATTGCT TATTC ATCAATGGCG TTTTTATTTGTGTAT TERM 1100 911593 - 911617 + T 100 -8.6 -5.4433 | opp_overlap 911593 CTAAGCACTAAACAA CGCCATTGCT TATTC ATCAATGGCG TTTTTATTTGTGTAT Shewmr7_0799 912119 - 911706 - | GCN5-related N-acetyltransferase Shewmr7_0800 912238 - 912633 + | invasion gene expression up-regulator, SirB TERM 1101 912806 - 912783 - g 79 -12.5 -3.14344 | opp_overlap 912782 912781 912779 912785 TACTTGGTGGATCAA CAGCAACGC TTAAAT GCGTTGCTG CATTGGTTTTATCAG Shewmr7_0801 912633 - 913421 + | hypothetical protein TERM 1102 913427 - 913453 + F 100 -13.8 -4.82901 | opp_overlap 913430, overlap 913430 CTATCACTAAATCTT AAAGGAGAGCCT AGC AGGCTCTCCTTG TTTTTCTAAAAAACA TERM 1103 913430 - 913450 + F 100 -15.5 -4.52873 | opp_overlap 913430, overlap 913427 TCACTAAATCTTAAA GGAGAGCCT AGC AGGCTCTCC TTGTTTTTCTAAAAA TERM 1104 913450 - 913430 - f 100 -15.5 -3.73107 | opp_overlap 913430 913427 TCACTAAATCTTAAA GGAGAGCCT AGC AGGCTCTCC TTGTTTTTCTAAAAA TERM 1105 913505 - 913517 + F 71 -4.8 -4.62783 | opp_overlap 913505 AAGTTTGCCCACTAA CTGC AAACG GCAG TTTTTAGCATAAATA Shewmr7_0802 913566 - 914813 + | hypothetical protein Shewmr7_0803 914870 - 915718 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1106 915764 - 915746 - f 100 -8.8 -4.8622 | opp_overlap 915747, overlap 915747 CTTCTTAACTAAAAA GCCCCGAA TCG TTCGGGGT TTTTTATTGGGTGAA TERM 1107 915763 - 915747 - f 100 -12.3 -3.5125 | opp_overlap 915747, overlap 915746 TTCTTAACTAAAAAG CCCCGAA TCG TTCGGGG TTTTTTATTGGGTGA TERM 1108 915747 - 915763 + F 100 -12.3 -5.4833 | opp_overlap 915747 915746 TTCTTAACTAAAAAG CCCCGAA TCG TTCGGGG TTTTTTATTGGGTGA Shewmr7_0804 915883 - 916755 + | hypothetical protein Shewmr7_0806 917928 - 917005 - | IS4 family transposase TERM 1109 918077 - 918108 + r 100 -16 -3.78953 | opp_overlap 918077 AGCGGTATCAGTAAA CTTGCCATCAGGAC GTGG GTCCTGATGGAAAG TTTAGTCATCGAGCT TERM 1110 918108 - 918077 - R 100 -16 -3.78953 | opp_overlap 918077 AGCGGTATCAGTAAA CTTGCCATCAGGAC GTGG GTCCTGATGGAAAG TTTAGTCATCGAGCT TERM 1111 918125 - 918138 + r 79 -8.1 -4.33153 | TTAGTCATCGAGCTA CAGGC TATA GCCTG TTTCTTCGTGTTCGG Shewmr7_0807 919522 - 918122 - | ammonium transporter Shewmr7_0808 919857 - 919519 - | nitrogen regulatory protein P-II Shewmr7_0809 921133 - 920153 - | 2-dehydropantoate 2-reductase TERM 1112 920626 - 920653 + g 70 -8.6 -3.75153 | gap 1, opp_overlap 920623, overlap 920631 GTCCGGTAAAATGGC CAAACTGGGTCAA GCC TTGACC-GGTTTG TTTGACTTGCCAGCG Shewmr7_0810 921495 - 921133 - | VanZ family protein Shewmr7_0811 921658 - 922143 + | nucleotide-binding protein TERM 1113 922206 - 922231 + T 100 -10.4 -5.66229 | opp_overlap 922198 922206 TGAAGAATACAGTAA GCCCCAAACC ATTTAC GGTCTGGGGC TTTTTTATTATTCAT TERM 1114 922231 - 922206 - T 100 -13.3 -3.42378 | opp_overlap 922206, overlap 922198 TGAAGAATACAGTAA GCCCCAAACCA TTTA CGGTCTGGGGC TTTTTTATTATTCAT Shewmr7_0812 923637 - 922246 - | major facilitator transporter TERM 1115 922605 - 922589 - G 71 -7.3 -4.04326 | CAAGCAAACAGCAAA TTGGTCA CGG CGACCAA GAGGGCGCCAAGGAA TERM 1116 923007 - 922995 - G 73 -6.3 -4.56597 | GCTCGCGGCTAAAAA GTGTT GTT AACAC CCCGACAAACATCAG TERM 1117 923167 - 923177 + g 79 -5.4 -5.00616 | overlap 923158 923156 ATAGGCGGCGGCAAG TGCA GCC TGCA TTTTTTCGGGGGCAG TERM 1118 923769 - 923752 - R 100 -7.7 -5.69262 | opp_overlap 923752 GGATAAAAATAAAAA GACCCAG CAAG CTGAGTC TTTATGTATTGTGTT Shewmr7_0813 924107 - 923787 - | hypothetical protein TERM 1119 924035 - 924009 - G 73 -10.2 -3.24232 | overlap 924005 TGTGTCCCAAAGATA GAGCTGGACTTC ATG GAAATCGAGCTC GTCACTCAAAAATGC Shewmr7_0814 924764 - 924177 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 1120 924254 - 924277 + g 77 -13.2 -2.52795 | AATTGAGTTTCGCAT TGGTCGTGGT CTCG ACCACGGCCA TCGCTTCCAGCACTT Shewmr7_0815 925376 - 924798 - | hypothetical protein Shewmr7_0816 925561 - 926064 + | OmpA domain-containing protein TERM 1121 926137 - 926150 + F 100 -9.5 -5.31275 | opp_overlap 926137 GTTTGTGTCGATTAA GCGCC TTCG GGCGC TTTTTTATGATCCGC TERM 1122 926150 - 926137 - f 72 -9.5 -3.14132 | opp_overlap 926137 GTTTGTGTCGATTAA GCGCC TTCG GGCGC TTTTTTATGATCCGC Shewmr7_0817 926319 - 927350 + | hypothetical protein Shewmr7_0818 927395 - 928258 + | sterol desaturase family protein Shewmr7_0819 928455 - 929087 + | hypothetical protein TERM 1123 929964 - 929953 - g 70 -4.4 -4.65263 | ACGCGGTAAAACAAA CCAT TGAG ATGG GCTGCTGGAGCGAGC Shewmr7_0820 929259 - 930656 + | UDP-N-acetylmuramate Shewmr7_0821 930658 - 931317 + | aromatic acid decarboxylase Shewmr7_0822 931325 - 931855 + | hypoxanthine phosphoribosyltransferase TERM 1124 931880 - 931897 + F 100 -12.7 -5.20781 | opp_overlap 931880 GCTCGACGACTCAAA CTCCCGC CAAG GCGGGAG TTTTGTTTTGTGCTG TERM 1125 931897 - 931880 - f 100 -12.7 -3.68351 | opp_overlap 931880 GCTCGACGACTCAAA CTCCCGC CAAG GCGGGAG TTTTGTTTTGTGCTG Shewmr7_0823 932083 - 933021 + | ABC transporter related Shewmr7_0824 933018 - 933788 + | ABC-2 type transporter Shewmr7_0825 934619 - 938395 + | protease domain-containing protein TERM 1126 938456 - 938474 + T 100 -13.2 -5.68039 | opp_overlap 938456 GTTTAGTCTAGAAAA CATCGCTC TTT GAGCGATG TTTTTTTATGGCTTT TERM 1127 938474 - 938456 - T 100 -13.2 -4.4009 | opp_overlap 938456 GTTTAGTCTAGAAAA CATCGCTC TTT GAGCGATG TTTTTTTATGGCTTT Shewmr7_0826 938974 - 938480 - | DNA-binding transcriptional regulator AsnC Shewmr7_0827 939714 - 939037 - | ribosomal large subunit pseudouridine synthase A TERM 1128 939093 - 939108 + g 73 -6.1 -4.48741 | TGAACGTCATGCTCT CACCC GTATAA GGGTG TTTTATGGTCAGTTC TERM 1129 939995 - 939982 - g 74 -3.8 -5.00616 | GGCGCCTGCAAAAAA TGCC GATTAT GGCA TTGAAGCCATTCGCC TERM 1130 941618 - 941608 - g 76 -4.6 -4.9218 | opp_overlap 941608 CACCTACGAGAAAAA CGGC GTG ACCG AAGATGTGCCGTTAA Shewmr7_0828 939902 - 941818 + | peptidase U32 TERM 1131 941865 - 941840 - f 100 -16.3 -3.16742 | opp_overlap 941840 TTGAATGGTTATCAA GGGAGCATTGA GTAT TCAATGCTCCC TTTTTGTTTTTAGGG TERM 1132 941840 - 941865 + F 100 -16.3 -5.61881 | opp_overlap 941840 TTGAATGGTTATCAA GGGAGCATTGA GTAT TCAATGCTCCC TTTTTGTTTTTAGGG Shewmr7_0829 941960 - 942334 + | hypothetical protein TERM 1133 942414 - 942433 + G 91 -9.4 -4.87133 | AGCTTTGGTTTTTTA GGGATAAT TTCA ATTATCCC TTTTGTTTCGAAACT TERM 1134 942534 - 942550 + G 78 -3.7 -5.20781 | TCGTTGATGTTAGTA CTGATGA TGT TTATCGG TTTTGTTTTCTCATC TERM 1135 942964 - 942984 + G 100 -6.9 -5.57729 | CCTTTGCGCTAAGTT CTGAGGTTA ATT TAGCCTTAG TTTTTTATATTATTT Shewmr7_0830 942360 - 943112 + | abortive infection protein Shewmr7_0831 945386 - 943119 - | hypothetical protein Shewmr7_0832 945533 - 945862 + | cupin 2 domain-containing protein Shewmr7_0833 947059 - 945887 - | hypothetical protein TERM 1136 946473 - 946463 - G 76 -8.2 -4.18697 | AAAATGATCGTAAAA GCGC CAG GCGC GAATGCTGTCCCTTA Shewmr7_0834 948282 - 947119 - | twin-arginine translocation pathway signal TERM 1137 947920 - 947910 - G 70 -4.6 -4.64676 | opp_overlap 947887 947886 GGATTTGGAAGAAAA CCGC GGT GCGA TTGCTCTCCCTTGCC TERM 1138 948189 - 948172 - G 74 -9.8 -3.60792 | ACCATCTATATATAA GCGCCG AGAGCG CGGCGC TGCAAGGCTGGAGAA Shewmr7_0835 948836 - 948393 - | Fe-S metabolism associated SufE Shewmr7_0836 950151 - 948904 - | cysteine desulfurase TERM 1139 950311 - 950321 + H 70 -2.6 -5.04601 | GTGAATCGGGGATGC TAAA GGT TTTA TTTTTCGTTTATAAG TERM 1140 950413 - 950428 + H 71 -3.2 -5.03747 | TTGGTTGTTGGAGTT CAAAGC TTAT GCTTGG TTTTTTAAAAGATTT TERM 1141 950629 - 950641 + G 74 -7.7 -4.14392 | TCGAGAGTTCGATTA GCCTT GAA AAGGC TTTTCGCGCTTCAGA TERM 1142 951674 - 951659 - g 77 -10.4 -3.53811 | opp_overlap 951650, overlap 951648 TTTACTGGCGTTAAA CGCCTC CATT GAGGCG GCTAGGGCGGGCGAT Shewmr7_0837 950421 - 952121 + | methyl-accepting chemotaxis sensory transducer TERM 1143 952160 - 952186 + T 100 -21 -5.04987 | opp_overlap 952160 TAGTACTCAAACAAA GATGCCCAGCAC TCA GTGCTGGGCATC TTTTTTACGCATCTT TERM 1144 952186 - 952160 - T 100 -21 -4.47183 | opp_overlap 952160 TAGTACTCAAACAAA GATGCCCAGCAC TCA GTGCTGGGCATC TTTTTTACGCATCTT Shewmr7_0838 953881 - 952232 - | DEAD/DEAH box helicase domain-containing protein TERM 1145 953179 - 953191 + g 80 -3.3 -5.2197 | GTTTGATGAGCTGGA TCAGC AGC GCCGA TTTTTGATTTTTATC TERM 1146 954185 - 954197 + H 74 -7.7 -3.98484 | opp_overlap 954184 TTAGTAAAGATAACC GGGAA ATT TTCCC TTTGTAGCTTGAATT TERM 1147 954644 - 954672 + G 77 -10.9 -3.57883 | overlap 954662 GCGCCTTGGATTTAG GCATGTGGCAGGA TGG TCCTGCCCCGCGC TTTGGCAGCTGTTAT Shewmr7_0839 954277 - 955323 + | hypothetical protein TERM 1148 955634 - 955624 - g 80 -2.4 -5.43866 | opp_overlap 955626, overlap 955626 CAAGTCGCAAAAAAA GGCC TGT GGCT GGTTTGTTAAGCTCT Shewmr7_0840 955571 - 957508 + | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1149 958991 - 959012 + G 71 -5.9 -4.33153 | gap 1, overlap 958991 GTATCGGCGTGGCAA GG-GCATTAC TGC GTGATGCGCC TTTATTACTGTTAGA Shewmr7_0841 957505 - 959256 + | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1150 959632 - 959615 - g 72 -8.4 -3.8709 | opp_overlap 959613 AAAGGGCCCGAGAAA GACCGC TGTGAG GCGGTC AATATTACGGATGCC Shewmr7_0842 959309 - 959923 + | putative adenylyl cyclase CyaB Shewmr7_0843 960153 - 959974 - | DNA binding domain-containing protein TERM 1151 960235 - 960206 - R 100 -12.3 -4.07466 | opp_overlap 960209, overlap 960209 AGTATAGAACAAGAA TAAGACTGCGC TTTGGCTG GCGCAGTCTTA GGTTGGCTGGCGACT TERM 1152 960209 - 960232 + r 77 -10.3 -3.19192 | opp_overlap 960206 960209 ATAGAACAAGAATAA GACTGCGCT TTGGCT GGCGCAGTC TTAGGTTGGCTGGCG TERM 1153 960232 - 960209 - R 85 -9.6 -4.14147 | opp_overlap 960209, overlap 960206 ATAGAACAAGAATAA GACTGCGC TTTGGCTG GCGCAGTC TTAGGTTGGCTGGCG Shewmr7_0844 960983 - 960249 - | hypothetical protein Shewmr7_0845 961338 - 962882 + | OmpA/MotB domain-containing protein TERM 1154 964128 - 964149 + G 71 -5.9 -4.38203 | GGTTCTAGAGATGCT TGAAGGATG CGGA CATCGTTCA TTTCTTACTTATATG Shewmr7_0846 962905 - 964494 + | hypothetical protein TERM 1155 965123 - 965111 - g 72 -4.1 -4.8048 | CTTTTACAGTAAAAA CACCT TGA AAGTG ATTGCACCCGAGCAA Shewmr7_0847 964494 - 965351 + | hypothetical protein TERM 1156 965358 - 965374 + T 100 -12.3 -4.41353 | opp_overlap 965358 GATATGTAATAAAAA GCCAGAC TCA GTCTGGC TTTTAGTATGTGTAA TERM 1157 965374 - 965358 - T 100 -12.3 -5.12068 | opp_overlap 965358 GATATGTAATAAAAA GCCAGAC TCA GTCTGGC TTTTAGTATGTGTAA TERM 1158 965435 - 965471 + T 71 -2.4 -5.08255 | gap 1, opp_overlap 965441, overlap 965438 965441 GGCTTATTTAATCTC TTAA-GATGAGGCTAAG ACTT CATAGCCTCATAGTTGA TTTTATTTTAAGGAT TERM 1159 965464 - 965441 - T 71 -9.6 -3.04322 | opp_overlap 965438 965435 965441 TTTAATCTCTTAAGA TGAGGCTAAG ACTT CATAGCCTCA TAGTTGATTTTATTT TERM 1160 965441 - 965464 + T 71 -9.6 -2.99031 | opp_overlap 965441, overlap 965438 965435 TTTAATCTCTTAAGA TGAGGCTAAG ACTT CATAGCCTCA TAGTTGATTTTATTT Shewmr7_0848 966505 - 965582 - | IS4 family transposase Shewmr7_0849 966511 - 967284 + | LemA family protein TERM 1161 967308 - 967292 - T 100 -12.3 -5.70522 | opp_overlap 967292 AAGAATAATAAAAAA GCCAGAC AGA GTCTGGC TTTCGTTTATCAATA TERM 1162 967292 - 967308 + T 100 -12.3 -4.15066 | opp_overlap 967292 AAGAATAATAAAAAA GCCAGAC AGA GTCTGGC TTTCGTTTATCAATA Shewmr7_0850 970530 - 967336 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1163 970727 - 970758 + r 91 -13.2 -2.70298 | opp_overlap 970732, overlap 970732 AACGCTCAATTGACA AAAAAGCCAGTGTT TGAA AACACTGGCTTTTA CTTATACTTCGCGGC TERM 1164 970732 - 970753 + r 100 -13.1 -4.52781 | opp_overlap 970732, overlap 970727 TCAATTGACAAAAAA GCCAGTGTT TGAA AACACTGGC TTTTACTTATACTTC TERM 1165 970753 - 970732 - R 100 -13.1 -5.31456 | opp_overlap 970732 970727 TCAATTGACAAAAAA GCCAGTGTT TGAA AACACTGGC TTTTACTTATACTTC Shewmr7_0851 971337 - 970789 - | SH3 domain-containing protein TERM 1166 971451 - 971429 - R 100 -16.4 -3.17194 | opp_overlap 971427 971426 AGGCCTGCAATGCAA GAGGGAAGTC ATA GACTTCCCTC AACTTTGCCGCATCC Shewmr7_0852 972819 - 971530 - | phosphate transporter Shewmr7_0853 973525 - 972845 - | hypothetical protein TERM 1167 973592 - 973565 - H 91 -8.4 -4.63527 | opp_overlap 973564 CCATGATTGGAAAAA GCGGGCGCAT GTTACCCT ATGCGTCCGC GTATTGAAACTGTGT TERM 1168 973627 - 973602 - H 70 -7.7 -3.64703 | opp_overlap 973601 973597 973602 GTCCGCGTATTGAAA CTGTGTTTTTT GAGA AAAAATCACAG CTTTATTCTAACGGG Shewmr7_0854 973757 - 975268 + | adenylate cyclase TERM 1169 975297 - 975326 + T 100 -10.1 -4.78752 | gap 1, opp_overlap 975299, overlap 975299 TAGTTACATTGCATA AAGCGTAGGAAGGC CAT GCCTTCCTA-GCTA TTTTTCGCTTCTAGT TERM 1170 975299 - 975324 + T 100 -12.7 -4.00465 | gap 1, opp_overlap 975299, overlap 975297 GTTACATTGCATAAA GCGTAGGAAGGC CAT GCCTTCCTA-GC TATTTTTCGCTTCTA TERM 1171 975324 - 975299 - T 100 -12.7 -3.91144 | gap 1, opp_overlap 975299 975297 GTTACATTGCATAAA GCGTAGGAAGGC CAT GCCTTCCTA-GC TATTTTTCGCTTCTA Shewmr7_0855 976144 - 975320 - | Ion transport 2 domain-containing protein TERM 1172 975747 - 975730 - G 74 -7.7 -4.19506 | AGGCGAAGGTTAAAA TGGTCAC CATA GCGACCA GTAAACTGGCGAGAG TERM 1173 975943 - 975922 - G 80 -2.9 -5.36441 | GGCGCAGATAAAAAA CTTTATCGC GAGC GCGAAACAG GCCAATGAAAAAGTT TERM 1174 976226 - 976251 + r 70 -7.5 -3.794 | opp_overlap 976226, overlap 976221 TAACTTTGTGATAAA TCGCCCGACTT AGGT ATGTCAGGCGA TTTAATGGCTTAAAC TERM 1175 976251 - 976226 - R 84 -9.7 -3.86822 | opp_overlap 976221 976226 TAACTTTGTGATAAA TCGCCCGACTT AGGT ATGTCAGGCGA TTTAATGGCTTAAAC Shewmr7_0856 976609 - 976280 - | hypothetical protein TERM 1176 976702 - 976680 - R 76 -10.7 -2.53213 | opp_overlap 976680 976684, overlap 976684 TAATGGGTTAAGCGA TAAAGTGCG AATCG CGCACTTTA TCATATGCCAAAGCT TERM 1177 976680 - 976702 + r 76 -10.7 -2.62263 | opp_overlap 976680 976684, overlap 976684 TAATGGGTTAAGCGA TAAAGTGCG AATCG CGCACTTTA TCATATGCCAAAGCT TERM 1178 976684 - 976698 + r 72 -7.1 -4.0162 | opp_overlap 976680 976684, overlap 976680 GGGTTAAGCGATAAA GTGCG AATCG CGCAC TTTATCATATGCCAA TERM 1179 976698 - 976684 - R 72 -7.1 -3.97368 | opp_overlap 976684 976680, overlap 976680 GGGTTAAGCGATAAA GTGCG AATCG CGCAC TTTATCATATGCCAA Shewmr7_0857 977370 - 976717 - | hypothetical protein TERM 1180 977158 - 977146 - G 82 -7.7 -4.74706 | TTCAATACTCAAAAA TAGCG TCT CGCTA CCATGACCTTTAAGC TERM 1181 977460 - 977500 + r 70 -9.2 -2.85996 | opp_overlap 977460, overlap 977459 ACCTAAAACAAAAAA GCCGAGCA-CAATAGGGG GTGATGG TCCC-ATTGGTGCTCGGC GTTTGGTCAATCATG TERM 1182 977500 - 977460 - R 100 -9.9 -5.80951 | gap 1, opp_overlap 977460 977459 ACCTAAAACAAAAAA GCCGAGCAC-AATAGG GGGTGATGGT CCCATTGGTGCTCGGC GTTTGGTCAATCATG Shewmr7_0858 978207 - 977518 - | phage shock protein A, PspA TERM 1183 977905 - 977921 + g 70 -2.2 -5.01732 | CTGCTCTGCCAGCTC TTGCTC CAATT GTGCAA TTTTTTCAGCCACTT Shewmr7_0859 978633 - 978220 - | hypothetical protein Shewmr7_0860 980445 - 978712 - | spermidine synthase TERM 1184 978906 - 978918 + g 71 -7.7 -4.11394 | overlap 978889 TCAGCTCGCCAAGGC GATGC TGG GCATC TTTTCCCGATAGGGT TERM 1185 979724 - 979712 - G 71 -5.5 -4.46212 | CCCGTGACCACAAAA TGCCC TGC GAGCA ATAATTTCGCCCTTT TERM 1186 980353 - 980331 - G 78 -13.4 -2.62983 | GGTATTCGTAGATCA GGCCGCACCC AGC GAGTACGGCC ATAATACCCAATAGT Shewmr7_0861 981349 - 980450 - | hypothetical protein Shewmr7_0862 982342 - 981365 - | hypothetical protein TERM 1187 981564 - 981586 + g 80 -3.4 -5.23316 | TAGGGGCTGTCGAAG CGTTTCCCTT GAG AATCGAAACG TTTTTTAGTCTGCTC TERM 1188 982660 - 982648 - g 71 -10.5 -3.05384 | CCCCTCGTTACTCAA GCCGC AGA GCGGC ATTGGGCACGCCTCG Shewmr7_0863 982597 - 985461 + | (glutamate--ammonia-ligase) adenylyltransferase TERM 1189 986094 - 986118 + G 76 -4.9 -5.0538 | opp_overlap 986100, overlap 986096 986100 CGCAAGTTGCCGTCG AACGGATGCCG AGG CGGCATTGGTA TTTTTTGACCTCGAC TERM 1190 986096 - 986116 + G 74 -7.5 -4.15748 | opp_overlap 986100, overlap 986094 986100 CAAGTTGCCGTCGAA CGGATGCCG AGG CGGCATTGG TATTTTTTGACCTCG TERM 1191 986100 - 986112 + G 73 -9.1 -3.66995 | opp_overlap 986100, overlap 986096 986094 TTGCCGTCGAACGGA TGCCG AGG CGGCA TTGGTATTTTTTGAC Shewmr7_0864 985522 - 986493 + | diguanylate cyclase with GAF sensor TERM 1192 986561 - 986584 + T 100 -15.4 -3.14463 | opp_overlap 986561 986564, overlap 986564 TAGCTTATGATGTAA CAAGGGAGAC TTAG GTCTCCCTTG TTCATGCAGAGGATT TERM 1193 986584 - 986561 - T 100 -15.4 -3.09834 | opp_overlap 986561 986564, overlap 986564 TAGCTTATGATGTAA CAAGGGAGAC TTAG GTCTCCCTTG TTCATGCAGAGGATT TERM 1194 986564 - 986581 + T 90 -11.3 -3.71848 | opp_overlap 986564 986561, overlap 986561 CTTATGATGTAACAA GGGAGAC TTAG GTCTCCC TTGTTCATGCAGAGG TERM 1195 986581 - 986564 - T 90 -11.3 -3.69395 | opp_overlap 986561 986564, overlap 986561 CTTATGATGTAACAA GGGAGAC TTAG GTCTCCC TTGTTCATGCAGAGG Shewmr7_0865 987557 - 986598 - | hypothetical protein TERM 1196 986856 - 986844 - G 70 -4.7 -4.67048 | CCATGCCAAAATAAA CGGCG TTA CGGCG GCAAACACTAACAGA Shewmr7_0866 987694 - 988671 + | LysR family transcriptional regulator Shewmr7_0867 988748 - 989371 + | lysine exporter protein LysE/YggA TERM 1197 989367 - 989355 - T 70 -5.5 -4.56597 | GTCTGGCCGGAAAAA TCGCC ATT AGCGA GTGACAACTTAAGTG Shewmr7_0868 990404 - 989469 - | NAD-dependent epimerase/dehydratase Shewmr7_0869 991079 - 990642 - | MerR family transcriptional regulator Shewmr7_0870 992334 - 991129 - | AFG1 family ATPase TERM 1198 991696 - 991708 + g 73 -9.1 -3.72231 | overlap 991692 GGCAATGGCCTCAGC CGACG GCT CGTCG TTATTCAATGTGTGC Shewmr7_0871 992563 - 993351 + | hypothetical protein TERM 1199 993906 - 993882 - f 71 -8.5 -3.4247 | overlap 993884 ACAATTCTAATAACA CAGGCATTCCC ACC GGGAATGGCAG ACTGCAATACAGGAG TERM 1200 993904 - 993884 - f 76 -9.7 -3.2756 | overlap 993882 AATTCTAATAACACA GGCATTCCC ACC GGGAATGGC AGACTGCAATACAGG TERM 1201 993949 - 993968 + G 83 -9.2 -4.42667 | AAATTGACCTTACTT GCCGCGGC AACC GCTGTGGC TTTTACTGGTTTTGC Shewmr7_0872 993928 - 995208 + | phosphate-selective porin O and P Shewmr7_0873 995221 - 996174 + | hypothetical protein Shewmr7_0874 996185 - 996652 + | putative tricarboxylic transport membrane protein TERM 1202 996839 - 996862 + G 72 -3.8 -4.7497 | gap 1, overlap 996844 CAGGGATGATCTTAA TGGCGGGCGTG TAC TACGGC-GCCA TTTTTGGTGGGTCGA Shewmr7_0875 996655 - 998175 + | hypothetical protein Shewmr7_0876 998191 - 999804 + | signal transduction histidine kinase regulating citrate/malate metabolism Shewmr7_0877 999804 - 1000484 + | response regulator receiver/unknown domain-containing protein TERM 1203 1000543 - 1000557 + T 86 -10 -3.9373 | overlap 1000538 CTTGACCCTTTCAAG CTGCCA TTC TGGCAG TTTCGCTTTTAAGTC Shewmr7_0878 1002054 - 1000519 - | peptidase M16 domain-containing protein TERM 1204 1001166 - 1001181 + g 76 -5.4 -4.78029 | opp_overlap 1001166, overlap 1001158 1001157 1001161 1001167 GCTTTATCGACGAAG TCGCTT GATT AAGCGG TTTTGGTTTTGTTGA Shewmr7_0879 1003466 - 1002051 - | peptidase M16 domain-containing protein TERM 1205 1002579 - 1002562 - G 71 -7 -4.16016 | GTATTTTGGAATAAA TCGCCT TCGAGC AGGCGA ATAGCGGCAGCGTCG TERM 1206 1003557 - 1003571 + H 73 -3.6 -5.00884 | overlap 1003558 1003568 TTTCATCTAAATCAG TTGAAT AGC ATTCAG TTTTTTAAAAGAACT Shewmr7_0880 1003628 - 1004455 + | hypothetical protein TERM 1207 1004511 - 1004482 - T 100 -14.5 -3.65351 | opp_overlap 1004488, overlap 1004488 CTATTTCGATTGAAA CAAAAATACCCGC CTAG GCGGGTATTTTTA TGGGCGCAGCGGTAT TERM 1208 1004505 - 1004488 - T 100 -11.3 -5.30616 | opp_overlap 1004488, overlap 1004482 CGATTGAAACAAAAA TACCCGC CTAG GCGGGTA TTTTTATGGGCGCAG TERM 1209 1004488 - 1004505 + T 100 -11.3 -4.82901 | opp_overlap 1004488 1004482 CGATTGAAACAAAAA TACCCGC CTAG GCGGGTA TTTTTATGGGCGCAG Shewmr7_0881 1005470 - 1004556 - | ErfK/YbiS/YcfS/YnhG family protein TERM 1210 1004587 - 1004600 + g 76 -3.1 -5.1675 | gap 1, overlap 1004587 1004588 GTTGGCACGCCTGTA C-GCTC ATC GAGCAG TTTTTTAATCACTGC Shewmr7_0882 1007198 - 1005642 - | anaerobic nitric oxide reductase transcription regulator TERM 1211 1007372 - 1007336 - R 71 -3.1 -4.91712 | gap 2, opp_overlap 1007347, overlap 1007337 1007343 1007347 CGCAAGCTATAAAAA TCAGCAACCAAGGTGCC TAAAC GACACCTTGG-T-CAGA CCGGATTTATCGCTG TERM 1212 1007367 - 1007343 - R 91 -12.2 -3.43187 | opp_overlap 1007347, overlap 1007336 1007337 1007347 TATAAAAATCAGCAA CCAAGGTGCC TAAAC GACACCTTGG TCAGACCGGATTTAT Shewmr7_0883 1009676 - 1007391 - | putative nitric oxide reductase (subunit B) transmembrane protein TERM 1213 1011381 - 1011405 + G 70 -2.8 -4.8083 | GGCGGGATTACCGGG CGCTCAGTTG TACTT TAACTTGGCG TTTTTCGTGGTGTTA Shewmr7_0884 1010299 - 1012023 + | potassium/proton antiporter TERM 1214 1012147 - 1012118 - T 100 -12.3 -4.24602 | opp_overlap 1012123, overlap 1012123 ACAGATTTAAAATAA CAAAATGCCAAGC GATT GCTTGGCATTTTT ATTCGCTTTTAAGCA TERM 1215 1012123 - 1012142 + T 100 -12.2 -5.17507 | opp_overlap 1012123 1012118 TTTAAAATAACAAAA TGCCAAGC GATT GCTTGGCA TTTTTATTCGCTTTT TERM 1216 1012142 - 1012123 - T 100 -12.2 -5.093 | opp_overlap 1012123, overlap 1012118 TTTAAAATAACAAAA TGCCAAGC GATT GCTTGGCA TTTTTATTCGCTTTT Shewmr7_0885 1013116 - 1012190 - | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase Shewmr7_0886 1013219 - 1014649 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase Shewmr7_0887 1014646 - 1015473 + | hypothetical protein Shewmr7_0888 1015627 - 1016106 + | TetR family transcriptional regulator TERM 1217 1016144 - 1016129 - T 100 -10.4 -4.33105 | opp_overlap 1016129 GAATTACTATCAAAA GGAGCC TTCA GGCTCC TTTTTCGTTTCTATG TERM 1218 1016129 - 1016144 + T 100 -10.4 -5.07011 | opp_overlap 1016129 GAATTACTATCAAAA GGAGCC TTCA GGCTCC TTTTTCGTTTCTATG Shewmr7_0889 1016584 - 1016195 - | hypothetical protein TERM 1219 1016717 - 1016688 - R 100 -13.7 -4.17023 | opp_overlap 1016690 1016694, overlap 1016690 1016694 CTAAGCAGGGGAAAA GATAAAGGGAGCC AAGT GGCTCCCTTTATG ATTAATCAGCAAACT TERM 1220 1016690 - 1016715 + r 100 -16.3 -2.77899 | opp_overlap 1016688 1016690 1016694, overlap 1016694 AAGCAGGGGAAAAGA TAAAGGGAGCC AAGT GGCTCCCTTTA TGATTAATCAGCAAA TERM 1221 1016715 - 1016690 - R 100 -16.3 -3.68036 | opp_overlap 1016690 1016694, overlap 1016688 1016694 AAGCAGGGGAAAAGA TAAAGGGAGCC AAGT GGCTCCCTTTA TGATTAATCAGCAAA TERM 1222 1016711 - 1016694 - R 100 -12.7 -4.45771 | opp_overlap 1016690 1016694, overlap 1016690 1016688 AGGGGAAAAGATAAA GGGAGCC AAGT GGCTCCC TTTATGATTAATCAG TERM 1223 1016694 - 1016711 + r 100 -12.7 -4.08144 | opp_overlap 1016694 1016690 1016688, overlap 1016690 AGGGGAAAAGATAAA GGGAGCC AAGT GGCTCCC TTTATGATTAATCAG pntB 1018223 - 1016739 - | pyridine nucleotide transhydrogenase pntA 1019761 - 1018235 - | NAD(P) transhydrogenase subunit alpha TERM 1224 1018726 - 1018736 + g 91 -6.8 -5.19879 | overlap 1018699 CATCGAAGTTGATGC TGGC GAC GCCA TTTTTCTCTTTACAC Shewmr7_0892 1020179 - 1021993 + | sulfite reductase (NADPH) alpha subunit TERM 1225 1022038 - 1022017 - f 72 -9.5 -3.15257 | overlap 1022015 1022013 1022011 TCCCAAAGATAGAGA GCAGTATCC ACGG AGATACTGC CGCCGAACGAATTTT TERM 1226 1023069 - 1023083 + G 72 -10 -3.36878 | CGATGTGGTGATTGG CGATCG CGG CGATCG TTATGGCTGGGTCGA Shewmr7_0893 1022068 - 1023765 + | sulfite reductase subunit beta Shewmr7_0894 1023758 - 1024555 + | phosphoadenosine phosphosulfate reductase TERM 1227 1024581 - 1024602 + F 100 -8 -5.63517 | opp_overlap 1024581 GATTTAATAGACAAA TGCCGCAG TATTCC CTGTGGCA TTTTTTATTTCACAC TERM 1228 1024618 - 1024630 + F 79 -7.7 -4.34771 | TTTTTTATTTCACAC CACCA AAA TGGTG TTTTGCTCAATTTTA TERM 1229 1025390 - 1025404 + G 70 -4.2 -4.63218 | CGCCTCTGTTTTAAG CGTGGT GCT ACTGCG TTTTATTGACCCGCC Shewmr7_0895 1025175 - 1026017 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 1230 1026316 - 1026345 + F 84 -6.5 -4.94992 | opp_overlap 1026306 1026319, overlap 1026319 AACAGGTCAGTATTT AAATACTGAAGGC GAGT GCTTTCGGTATTA TTTTTGTCACTTTGA TERM 1231 1026319 - 1026342 + F 87 -8.2 -4.55383 | opp_overlap 1026306 1026319, overlap 1026316 AGGTCAGTATTTAAA TACTGAAGGC GAGT GCTTTCGGTA TTATTTTTGTCACTT Shewmr7_0896 1026383 - 1028119 + | hypothetical protein TERM 1232 1028150 - 1028166 + T 100 -9.4 -5.87996 | opp_overlap 1028150 TGCATTAATCGAAAA GCCAGC TTATT GCTGGC TTTTTTTGTTAATTG TERM 1233 1028166 - 1028150 - T 88 -9.4 -4.30014 | opp_overlap 1028150 TGCATTAATCGAAAA GCCAGC TTATT GCTGGC TTTTTTTGTTAATTG Shewmr7_0897 1029722 - 1028175 - | hypothetical protein TERM 1234 1028710 - 1028728 + g 76 -7.4 -4.30719 | opp_overlap 1028713, overlap 1028713 TCGGGGGAGCGGCGA TAATGGGC AAA GCCCATGA TTTGTTCTAGCGCCG TERM 1235 1029672 - 1029651 - G 100 -15.9 -4.75308 | AGGAATAGCGAAAAA CGCGAGCCT GATG AGGCTCGCG CAAATGATCACGCTC Shewmr7_0898 1030794 - 1029910 - | phospholipase A(1) TERM 1236 1030992 - 1031029 + H 70 -2.8 -5.03713 | gap 1, overlap 1031003 TTATGTGAGCTGATG CAAGTTTTGATTGCCGA TATAT TCGGC-ATTAAATCCTG TTTTATTTAATTATT TERM 1237 1031045 - 1031060 + H 77 -4.8 -5.055 | TTTTATTTAATTATT TCATTT GCTT AAATGA TTTTTTGGCCATTGG Shewmr7_0899 1031225 - 1032055 + | uroporphyrinogen-III C-methyltransferase Shewmr7_0900 1032137 - 1033045 + | sulfate adenylyltransferase subunit 2 cysN 1033175 - 1034617 + | sulfate adenylyltransferase subunit 1 Shewmr7_0902 1034621 - 1036345 + | TrkA domain-containing protein TERM 1238 1036356 - 1036380 + F 100 -13 -3.58329 | overlap 1036367 TTTAATGATTTTTTG CCTTAGGTTG TTACT CAACCTAAGG TTTGAGGAGTATTTA Shewmr7_0903 1036395 - 1037012 + | adenylylsulfate kinase Shewmr7_0904 1037873 - 1037034 - | hypothetical protein TERM 1239 1038020 - 1038030 + r 71 -3.2 -5.01546 | GGCACTTTTTAACTG TCGA GAC TCGG TTTTTCTATGGATTT Shewmr7_0905 1039218 - 1038013 - | major facilitator transporter TERM 1240 1038579 - 1038561 - G 76 -4.5 -4.98436 | CGAACACCATAAAAA TCTGCCG ACGGG CGCCAGA GAAGAAGGTTAACAG Shewmr7_0906 1039661 - 1040182 + | protoporphyrinogen oxidase TERM 1241 1040675 - 1040692 + G 72 -4.1 -4.81083 | TACCATCAAATTTGC GCCGATG TATT TATTGGC TTTTTAGTGGTTCAC Shewmr7_0907 1040225 - 1040752 + | hypothetical protein Shewmr7_0908 1041018 - 1042025 + | putative lipoprotein TERM 1242 1042052 - 1042081 + T 100 -15.3 -3.10715 | opp_overlap 1042052 1042059, overlap 1042059 GTAATCAACACATAA TAAAAAACCAGCA TCTC TGCTGGTTTTTTA TTGGCTGCTCGTCAA TERM 1243 1042081 - 1042052 - T 100 -15.3 -3.72909 | opp_overlap 1042052 1042059, overlap 1042059 GTAATCAACACATAA TAAAAAACCAGCA TCTC TGCTGGTTTTTTA TTGGCTGCTCGTCAA TERM 1244 1042074 - 1042059 - T 100 -9 -5.62045 | opp_overlap 1042052 1042059, overlap 1042052 ACACATAATAAAAAA CCAGCA TCTC TGCTGG TTTTTTATTGGCTGC TERM 1245 1042059 - 1042074 + T 100 -9 -5.4833 | opp_overlap 1042059 1042052, overlap 1042052 ACACATAATAAAAAA CCAGCA TCTC TGCTGG TTTTTTATTGGCTGC Shewmr7_0909 1042856 - 1042104 - | DSBA oxidoreductase Shewmr7_0910 1043757 - 1043113 - | heat shock protein DnaJ domain-containing protein TERM 1246 1043944 - 1043957 + r 74 -6.7 -4.26019 | opp_overlap 1043943 TACCCCGAGAACACT CCAAC TTTG GTTGG TTTTAACTCTAGTTA TERM 1247 1044009 - 1044038 + r 81 -9.4 -3.74347 | opp_overlap 1044009, overlap 1044002 ATAAGGCAATAAAAA GCCCTTGCTTTA ACTAAG TAAAACAAGGGC TTTAAAATTTATGGA TERM 1248 1044038 - 1044009 - R 100 -11.6 -5.14645 | opp_overlap 1044002 1044009 ATAAGGCAATAAAAA GCCCTTGCTTTA ACTAAG TAAAACAAGGGC TTTAAAATTTATGGA Shewmr7_0911 1044711 - 1044058 - | dihydropteridine reductase TERM 1249 1045755 - 1045783 + G 70 -8.1 -3.67775 | CCGGTAATGCTATGG GACGCCGTGCA ATTTTCA TGTACGGCGCC TTATTGCCTCGAAAT Shewmr7_0912 1045106 - 1047061 + | beta-lactamase domain-containing protein TERM 1250 1047108 - 1047159 + G 73 -8.9 -3.75863 | gap 2, opp_overlap 1047106, overlap 1047125 1047154 TTTTTTGACAGCAGT CTGTTCGTT-TA-GCGCAAGCCCAA TAAG TTGGGCTTGCTCCTACGACGGTCAG TTTGCTAACCCTTTT Shewmr7_0913 1047070 - 1047531 + | hypothetical protein TERM 1251 1047541 - 1047586 + F 100 -9.1 -5.10497 | opp_overlap 1047541 1047539 1047542, overlap 1047542 AGTTAATAAACAATA TCCTTGTGACCCTTTGGGT TTGAAAGT GCTCAAATGGTCACAAGGC TTTTTTAAGTCGCTT TERM 1252 1047542 - 1047585 + F 100 -12.6 -3.65214 | opp_overlap 1047542 1047541 1047539, overlap 1047541 GTTAATAAACAATAT CCTTGTGACCCTTTGGGT TTGAAAGT GCTCAAATGGTCACAAGG CTTTTTTAAGTCGCT TERM 1253 1047585 - 1047542 - f 72 -9.7 -2.81182 | opp_overlap 1047541 1047542, overlap 1047541 1047539 GTTAATAAACAATAT CCTTGTGACCCTTTGGG TTTGAAAGTG CTCAAATGGTCACAAGG CTTTTTTAAGTCGCT Shewmr7_0914 1047857 - 1048807 + | hypothetical protein Shewmr7_0915 1048918 - 1049412 + | hypothetical protein Shewmr7_0916 1049567 - 1049971 + | glutathione-dependent formaldehyde-activating, GFA TERM 1254 1050044 - 1050017 - T 100 -10.6 -4.88918 | GTAGGGTAAATAAAA CGCCCACAGTTA ACAC TAACAATGGGCG TGGAAGATTAAGCTT Shewmr7_0917 1050806 - 1050081 - | ABC transporter related Shewmr7_0918 1051479 - 1050799 - | polar amino acid ABC transporter, inner membrane subunit Shewmr7_0919 1052219 - 1051485 - | extracellular solute-binding protein TERM 1255 1052681 - 1052696 + G 70 -3.2 -4.89477 | opp_overlap 1052666 1052681, overlap 1052682 CCCAATGGCATTACA CCATGG GGAT CCATGA TTTTATTGTTGAACA Shewmr7_0920 1052593 - 1053417 + | hypothetical protein Shewmr7_0921 1054312 - 1053422 - | LysR family transcriptional regulator TERM 1256 1054854 - 1054837 - g 70 -2.7 -4.88228 | gap 1, overlap 1054841 ACTCAATATCAAAAA GCAT-GCA CGT CGCCATGC TAAGGCCGCCTAATG Shewmr7_0922 1054433 - 1054867 + | LrgA family protein Shewmr7_0923 1054867 - 1055601 + | LrgB family protein TERM 1257 1055688 - 1055719 + F 91 -6.6 -5.47218 | gap 1, overlap 1055689 GTTGTTTTGCCTCTT AGGGCGC-TAACC TCTGCTT GGTTATGCGCCCA TTTTTTTAGCTAACG TERM 1258 1055689 - 1055718 + F 84 -10.1 -3.87608 | gap 1, overlap 1055688 TTGTTTTGCCTCTTA GGGCGC-TAACC TCTGCTT GGTTATGCGCCC ATTTTTTTAGCTAAC Shewmr7_0924 1055785 - 1056261 + | GCN5-related N-acetyltransferase Shewmr7_0925 1056489 - 1057964 + | carbon starvation protein CstA TERM 1259 1057989 - 1058007 + F 100 -14.6 -4.81734 | TTTTATGATTGCTAA GGGCTGCA TTT TGCAGCCC TTTTTAATACTATTT TERM 1260 1058557 - 1058545 - g 87 -4.7 -5.46657 | overlap 1058546 1058547 CATTTCAAGAAAAAA GCCGC CCT GTGGC GTGAGGATGATTCGG mdoD 1058083 - 1059897 + | glucan biosynthesis protein D TERM 1261 1059943 - 1059925 - f 100 -11.7 -4.24002 | opp_overlap 1059925 TGTTAAATCTTAAAA CGCCAGC CCTGT GCTGGCG TTTTTGCATTAGCGG TERM 1262 1059925 - 1059943 + F 100 -11.7 -4.74103 | opp_overlap 1059925 TGTTAAATCTTAAAA CGCCAGC CCTGT GCTGGCG TTTTTGCATTAGCGG Shewmr7_0927 1060092 - 1061561 + | phosphate transporter Shewmr7_0928 1062524 - 1061574 - | hypothetical protein TERM 1263 1061884 - 1061872 - G 70 -4.7 -4.63218 | GTTTGGCCAATAAAA CGCAC CAC GGGCG TATGGGCGGTCGCGA TERM 1264 1062744 - 1062759 + H 70 -6 -4.2461 | overlap 1062745 TTTTGGACTTTAATG GCGGGG ATTT CCCCGG TTTGTTAATGGGCCT TERM 1265 1062745 - 1062758 + H 72 -9.5 -3.14284 | overlap 1062744 TTTGGACTTTAATGG CGGGG ATTT CCCCG GTTTGTTAATGGGCC Shewmr7_0929 1062814 - 1064208 + | diguanylate cyclase with PAS/PAC sensor TERM 1266 1064271 - 1064244 - T 100 -10 -5.10208 | opp_overlap 1064244 TAATCTTAATAAAAA TCCCCGATAA GACTCAGA TTATCGGGGA TTTTTTATAGCGTGG TERM 1267 1064244 - 1064271 + T 100 -10 -5.26316 | opp_overlap 1064244 TAATCTTAATAAAAA TCCCCGATAA GACTCAGA TTATCGGGGA TTTTTTATAGCGTGG Shewmr7_0930 1066210 - 1064318 - | methyl-accepting chemotaxis sensory transducer TERM 1268 1065751 - 1065766 + g 80 -2.6 -5.44119 | gap 1, opp_overlap 1065739 CCATGACGGGCTCGG CAA-TGG TCA CCACTTG TTTTTTTAAGGTGGC TERM 1269 1066031 - 1066080 + g 75 -8.8 -3.94184 | gap 1, opp_overlap 1066050, overlap 1066036 1066040 CGCCATTTTGCGATC TTGCATCCACAGGCCAATACCTT CGGCA AAGGTATTCGCCAGTTGAT-CAA TTTCATGTTGAGTAT TERM 1270 1067731 - 1067713 - g 74 -3.9 -4.98436 | opp_overlap 1067713 TTAACAGCATAAAAA TCGATAA GATGT TTACCGA TACTATAGGTACCGA Shewmr7_0931 1066404 - 1067960 + | EAL domain-containing protein TERM 1271 1067991 - 1067974 - T 100 -11.3 -5.68039 | opp_overlap 1067974 AAAGGCATAAAAAAA GAGGCTC GAAT GAGCCTC TTTTTAGTGGATGAT TERM 1272 1067974 - 1067991 + T 100 -11.3 -4.75372 | opp_overlap 1067974 AAAGGCATAAAAAAA GAGGCTC GAAT GAGCCTC TTTTTAGTGGATGAT TERM 1273 1068006 - 1068028 + T 86 -5.7 -5.3104 | gap 1 CTTTTTAGTGGATGA TGACCCGATT TATC AAT-GGGTCA TTTTATTTTTGATCA Shewmr7_0932 1070651 - 1068018 - | aminopeptidase N TERM 1274 1068514 - 1068532 + g 71 -5.2 -4.49389 | CAGCGGAGATCTTGG TCTAGGGT TAA GCCCTTGA TTTTGGTTGTACCAT TERM 1275 1070852 - 1070872 + r 100 -12.6 -4.73682 | GGTTGACAGTTTTTA GGCCAGCT CCAGT AGCTGGCC TTTTCTATTGTGCAC Shewmr7_0933 1071652 - 1070849 - | integrase catalytic subunit TERM 1276 1071083 - 1071063 - G 79 -11.1 -3.54029 | opp_overlap 1071062 1071063 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 1277 1071063 - 1071083 + g 71 -11.1 -2.79327 | opp_overlap 1071063, overlap 1071062 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA Shewmr7_0934 1072077 - 1071682 - | transposase TERM 1278 1072150 - 1072133 - R 100 -7.7 -5.91981 | opp_overlap 1072133 AAAATGTAAAAAAAA GCCAGCA AAAA TACTGGC TTTTTTTGAGTATTT TERM 1279 1072133 - 1072150 + r 87 -5.5 -5.54264 | opp_overlap 1072133 AAAATGTAAAAAAAA GCCAGCA AAAA TACTGGC TTTTTTTGAGTATTT Shewmr7_0935 1072799 - 1072194 - | hypothetical protein Shewmr7_0936 1074255 - 1072855 - | TPR repeat-containing protein Shewmr7_0937 1074797 - 1074252 - | peptide deformylase Shewmr7_0938 1075072 - 1074860 - | SlyX family protein Shewmr7_0939 1076032 - 1075082 - | WD-40 repeat-containing protein TERM 1280 1076327 - 1076313 - g 71 -5.6 -4.58563 | GAAGCACAAAAAGAA GCCTAC AGT GTTGGC GCTTCAATCGGTCGT Shewmr7_0940 1076187 - 1076960 + | peptidylprolyl isomerase, FKBP-type TERM 1281 1077030 - 1077010 - f 100 -12.6 -3.52102 | opp_overlap 1077010 ATTGCATTTATAGAA TACCGCCC GCTTA GGGCGGTA TTTTTTTGCGGTATA TERM 1282 1077010 - 1077030 + F 100 -12.6 -5.45726 | opp_overlap 1077010 ATTGCATTTATAGAA TACCGCCC GCTTA GGGCGGTA TTTTTTTGCGGTATA TERM 1283 1077124 - 1077138 + F 78 -5.6 -4.78149 | CATCAGCCTCCAGCT CCCCAA ATG TCGGGG TTTTTAAATTGTGAC Shewmr7_0941 1077586 - 1080198 + | endonuclease/exonuclease/phosphatase TERM 1284 1080268 - 1080250 - f 95 -13.2 -3.15236 | opp_overlap 1080250 TAAACTCAGAGCTAA GGGATGGT TTT ACCATCCC TTTTTTATGGCACTG TERM 1285 1080250 - 1080268 + F 100 -13.2 -5.252 | opp_overlap 1080250 TAAACTCAGAGCTAA GGGATGGT TTT ACCATCCC TTTTTTATGGCACTG Shewmr7_0942 1080327 - 1080782 + | hypothetical protein Shewmr7_0943 1080893 - 1081330 + | hypothetical protein Shewmr7_0944 1081384 - 1081629 + | hypothetical protein Shewmr7_0945 1081976 - 1083436 + | catalase TERM 1286 1083462 - 1083481 + T 100 -13.6 -5.59962 | opp_overlap 1083462 TAGCCCCATAAAAAA GGCCAGTG TTAT CACTGGCC TTTTTGTTTATTTTC TERM 1287 1083481 - 1083462 - T 100 -13.6 -5.252 | opp_overlap 1083462 TAGCCCCATAAAAAA GGCCAGTG TTAT CACTGGCC TTTTTGTTTATTTTC Shewmr7_0946 1084104 - 1083508 - | hypothetical protein TERM 1288 1084392 - 1084403 + H 74 -4.4 -4.96523 | ATTGATTTAATTTTT GACA GCGC TGTC TTTTGTTGTTAGTTT TERM 1289 1084967 - 1084982 + G 73 -6 -4.47551 | CGGCAAAATTGCCAG CGCAGC CAAC GCGGCG TTTTCTCCCTTGGAT Shewmr7_0947 1084689 - 1086164 + | N-acetylglucosamine-binding protein A TERM 1290 1086254 - 1086294 + F 100 -17.1 -4.2679 | opp_overlap 1086261, overlap 1086257 1086261 AATCGCTAAACTCAT TGATAAACCCTGCAATGCC ACA GGTGTTGCAGGGTTTATTG TTTTGATAACAGTTC TERM 1291 1086257 - 1086291 + F 100 -18.8 -4.25256 | opp_overlap 1086261, overlap 1086254 1086261 CGCTAAACTCATTGA TAAACCCTGCAATGCC ACA GGTGTTGCAGGGTTTA TTGTTTTGATAACAG TERM 1292 1086261 - 1086287 + F 100 -15.2 -4.70107 | opp_overlap 1086261, overlap 1086257 1086254 AAACTCATTGATAAA CCCTGCAATGCC ACA GGTGTTGCAGGG TTTATTGTTTTGATA TERM 1293 1086287 - 1086261 - f 90 -10.8 -3.93984 | opp_overlap 1086261 1086257 1086254 AAACTCATTGATAAA CCCTGCAATGCC ACA GGTGTTGCAGGG TTTATTGTTTTGATA Shewmr7_0948 1086725 - 1087900 + | aromatic amino acid permease TERM 1294 1087929 - 1087907 - f 70 -7.1 -3.75153 | gap 1 GCGCTGTAAGTTAAA GCCGTTT-AG CGTA CTGAAACGGC AGAGTTAAACCGATA TERM 1295 1087960 - 1087976 + F 78 -5.9 -4.90455 | opp_overlap 1087960 AATATGATGAATGTA TTTGCTT TGT AAGCGAA TTTTTCTAACTCTGT TERM 1296 1088017 - 1088035 + F 100 -10.3 -5.18355 | opp_overlap 1088017 GTGCGATATGCTAAA GTCAGGC CCAGT GCCTGAC TTTTTGCTTTTTAGC TERM 1297 1088035 - 1088017 - f 82 -10.3 -3.63627 | opp_overlap 1088017 GTGCGATATGCTAAA GTCAGGC CCAGT GCCTGAC TTTTTGCTTTTTAGC TERM 1298 1088433 - 1088423 - g 86 -6.8 -4.9792 | GACTGCAGAGAAAAA CCTG TTG CAGG ACGGTTTCTTAGCTA TERM 1299 1090125 - 1090115 - g 70 -8.2 -3.66178 | opp_overlap 1090114 TTCTCCAACTTTAAA CGGC CGC GCCG AATTAGTGGGTTTAC Shewmr7_0949 1088139 - 1090295 + | dipeptidyl-peptidase 7 TERM 1300 1090425 - 1090391 - T 100 -16 -2.82529 | opp_overlap 1090396, overlap 1090396 CGAACGCAAGACAAT CAAAAGCGATAAACCA ATG TGGTTTATCGCTTTTT TGTATTCTGTTTCAT TERM 1301 1090420 - 1090396 - T 100 -15.9 -4.56314 | opp_overlap 1090396, overlap 1090391 GCAAGACAATCAAAA GCGATAAACCA ATG TGGTTTATCGC TTTTTTGTATTCTGT TERM 1302 1090396 - 1090420 + T 100 -15.9 -5.53436 | opp_overlap 1090396 1090391 GCAAGACAATCAAAA GCGATAAACCA ATG TGGTTTATCGC TTTTTTGTATTCTGT TERM 1303 1090892 - 1090941 + T 100 -11.5 -4.04719 | gap 1, opp_overlap 1090912 1090913, overlap 1090901 1090908 CAATCATAACCTCCG CAGCTCAAT-GGGACTGGAAACGC CAC GCGTTGGCAGTCCCTATTGAGGCG TTTCTGCTATCTCAT TERM 1304 1090901 - 1090931 + T 100 -14 -3.05562 | opp_overlap 1090912 1090913, overlap 1090892 1090908 CCTCCGCAGCTCAAT GGGACTGGAAACGC CAC GCGTTGGCAGTCCC TATTGAGGCGTTTCT Shewmr7_0950 1092270 - 1090948 - | hypothetical protein TERM 1305 1092963 - 1092999 + G 74 -11.1 -3.12856 | opp_overlap 1092972, overlap 1092968 TCCACTTTACGCCCT TTGAACTTATCACCA CAGTGAA TGGTGATAAGTTCAC TCTGTTGCCTGTATC TERM 1306 1092968 - 1092994 + G 70 -9.6 -3.19442 | opp_overlap 1092972, overlap 1092963 TTTACGCCCTTTGAA CTTATCACCA CAGTGAA TGGTGATAAG TTCACTCTGTTGCCT Shewmr7_0951 1092821 - 1094278 + | OmpA/MotB domain-containing protein TERM 1307 1094341 - 1094322 - T 100 -13.6 -4.18018 | opp_overlap 1094322 TCGTTCCATCTAAAA CGCCTGAG ATGA CTCAGGCG TTTTTATCTTCATTG TERM 1308 1094322 - 1094341 + T 100 -13.6 -5.1485 | opp_overlap 1094322 TCGTTCCATCTAAAA CGCCTGAG ATGA CTCAGGCG TTTTTATCTTCATTG Shewmr7_0952 1095151 - 1094441 - | pseudouridine synthase, Rsu Shewmr7_0953 1095855 - 1095163 - | hypothetical protein TERM 1309 1095992 - 1096020 + r 89 -11.8 -3.30124 | opp_overlap 1095994 1095998, overlap 1095994 1095998 CCTTAGGCAGATAAA AACAAAGGGAGC GAATG GCTCCCTTTGTG TTATCGACAGTCGAA TERM 1310 1096018 - 1095994 - R 100 -14.4 -4.99035 | opp_overlap 1095992 1095994 1095998, overlap 1095998 TTAGGCAGATAAAAA CAAAGGGAGC GAATG GCTCCCTTTG TGTTATCGACAGTCG TERM 1311 1095994 - 1096018 + r 100 -14.4 -3.21924 | opp_overlap 1095994 1095998, overlap 1095992 1095998 TTAGGCAGATAAAAA CAAAGGGAGC GAATG GCTCCCTTTG TGTTATCGACAGTCG TERM 1312 1096014 - 1095998 - R 100 -9.4 -5.01422 | opp_overlap 1095994 1095992 1095998, overlap 1095994 GCAGATAAAAACAAA GGGAGC GAATG GCTCCC TTTGTGTTATCGACA TERM 1313 1095998 - 1096014 + r 88 -9.4 -4.27117 | opp_overlap 1095998 1095994, overlap 1095994 1095992 GCAGATAAAAACAAA GGGAGC GAATG GCTCCC TTTGTGTTATCGACA Shewmr7_0954 1097378 - 1096041 - | Na+/H+ antiporter NhaC TERM 1314 1097157 - 1097174 + g 83 -2.7 -5.50723 | opp_overlap 1097158, overlap 1097158 ACCGCCGATAAAGGT ATCAATC GCTT GATTGAG TTTTTGTTTTGATAA TERM 1315 1098094 - 1098080 - g 70 -4.2 -4.74801 | overlap 1098081 1098084 GAACTCTATCAAAAA GTGACG TTG CGTAAC GACAAAGGCCAAGGC TERM 1316 1098266 - 1098247 - g 74 -2.1 -5.19879 | overlap 1098241 GCCGAAAGAGAAAAA CATAGGT TTTGCC ACCTCTG GCGCTGAAGTCGGCT Shewmr7_0955 1097927 - 1098835 + | hypothetical protein Shewmr7_0956 1098915 - 1099466 + | FMN-binding domain-containing protein TERM 1317 1099571 - 1099587 + G 90 -9.4 -4.64766 | GAGCCTGCCCTTCAA GCCGCT ATAAC AGCGGC TTTTTCGCGTGTGGC Shewmr7_0957 1099466 - 1100314 + | ApbE family protein, putative TERM 1318 1100633 - 1100622 - g 73 -3 -5.00616 | opp_overlap 1100627 GGCTGGCGTAAAAAA CTTA ACCA TAAG AGTGGATTAGTGATA Shewmr7_0958 1100370 - 1100837 + | hypothetical protein TERM 1319 1100836 - 1100866 + T 78 -9.2 -3.65351 | opp_overlap 1100842, overlap 1100838 GACAACGTATCCTCT AACCGATAAAAAAG AGT CTTTTTTATTGGTC TTTGAGTAACGCTAA TERM 1320 1100838 - 1100864 + T 91 -11.8 -3.40775 | opp_overlap 1100842, overlap 1100836 CAACGTATCCTCTAA CCGATAAAAAAG AGT CTTTTTTATTGG TCTTTGAGTAACGCT Shewmr7_0959 1102542 - 1100911 - | methyl-accepting chemotaxis sensory transducer TERM 1321 1102670 - 1102651 - R 100 -13.6 -4.99568 | CAACATTAAAGAAAA CGCCCCAA GATT TTGGGGCG TTGAGGAGAGAGATT Shewmr7_0960 1103575 - 1102685 - | hypothetical protein TERM 1322 1102829 - 1102811 - G 88 -14.6 -3.45945 | overlap 1102824 TTCATTCAGAATGAA CGCGGCTA AGA TAGCCGCG AGGATCGGCATCAAA TERM 1323 1102871 - 1102855 - G 72 -3.7 -4.75309 | TCAAATTGAAGAAAA TGCTG GTTTGCT CAGCA CCTAACTTGCTGATG Shewmr7_0961 1103788 - 1104567 + | AraC family transcriptional regulator TERM 1324 1104597 - 1104572 - T 100 -11.1 -5.25803 | opp_overlap 1104574 AACTGGGATAAAAAA GAGGGCGCGGT AGTA ACTACGCCCTC TTACAAATAAAGAGA TERM 1325 1104702 - 1104714 + T 76 -2.6 -5.34309 | TTAAGGTTTTCATCG GCGG TTTTT TCGC TTTTTCTTTACTCAT TERM 1326 1104865 - 1104838 - T 72 -9.4 -3.1355 | overlap 1104844 CTTACGGATAGTCAA TTTAAATTAACC TTTC GGCTAATTTAAA CCATAAAAAGCGTTA Shewmr7_0962 1105521 - 1105135 - | GreA/GreB family elongation factor TERM 1327 1105776 - 1105764 - R 72 -6.3 -4.29302 | overlap 1105771 TCCATATCAAAATAA GGTTA AAT TAACC ATCTAGCTTACTTGA Shewmr7_0963 1107192 - 1106185 - | cytochrome d ubiquinol oxidase, subunit II Shewmr7_0964 1108588 - 1107248 - | cytochrome bd ubiquinol oxidase, subunit I Shewmr7_0965 1108734 - 1110146 + | GntR family transcriptional regulator TERM 1328 1111356 - 1111344 - g 78 -4.1 -5.08011 | AAAATTGCCAAAAAA TCACC GGC GGTAA AGCCTCTGGGATCAT Shewmr7_0966 1110353 - 1111645 + | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 1329 1111661 - 1111690 + T 93 -13.7 -2.86676 | opp_overlap 1111666, overlap 1111666 GCCTCTAATCCCATC AAAAAGGCCGCTA TTGT TAGCGGCCTTTTA CTTTGCATTGCTGGC TERM 1330 1111666 - 1111685 + T 100 -13.6 -4.5852 | opp_overlap 1111666, overlap 1111661 TAATCCCATCAAAAA GGCCGCTA TTGT TAGCGGCC TTTTACTTTGCATTG TERM 1331 1111685 - 1111666 - T 100 -13.6 -4.74801 | opp_overlap 1111666 1111661 TAATCCCATCAAAAA GGCCGCTA TTGT TAGCGGCC TTTTACTTTGCATTG Shewmr7_0967 1114855 - 1111709 - | hypothetical protein TERM 1332 1113459 - 1113444 - G 100 -10.4 -4.60924 | TAAAGGGCGGAAAAA GCGGCA AAAC TGCCGC CAAAGACTAATAAGA TERM 1333 1114385 - 1114367 - G 70 -8.8 -3.54424 | GCTGATGGCCGCAAA TGGCGCCA TGA TGGCGGCA ACGCCTTGGGATAAG TERM 1334 1115048 - 1115014 - R 74 -10.1 -3.17274 | opp_overlap 1115019, overlap 1115012 1115019 GAATGATAAGAGAGA GCAAAGATAGCGCCA TGATT TTGCCCTATCTTTGC TGAGCTAAAGCGGTT Shewmr7_0968 1116195 - 1115062 - | rRNA (guanine-N(2)-)-methyltransferase TERM 1335 1116240 - 1116218 - H 95 -7.6 -5.08601 | overlap 1116219 CTATGCCAATAAAAA CGGCGCCAAT AAA AACGGCGCCA ATAAAAATGCTGCCA TERM 1336 1116239 - 1116219 - H 75 -8.9 -3.64438 | overlap 1116218 TATGCCAATAAAAAC GGCGCCAAT AAA AACGGCGCC AATAAAAATGCTGCC Shewmr7_0969 1116376 - 1117035 + | DNA-N1-methyladenine dioxygenase Shewmr7_0970 1117170 - 1117490 + | transcriptional regulator BolA TERM 1337 1117532 - 1117514 - f 100 -13.2 -4.42619 | opp_overlap 1117514 CAAGATTTTATAAAA GCCACGTT AAC AACGTGGC TTTTTTGTTTTAGGT TERM 1338 1117514 - 1117532 + F 100 -13.2 -5.80951 | opp_overlap 1117514 CAAGATTTTATAAAA GCCACGTT AAC AACGTGGC TTTTTTGTTTTAGGT Shewmr7_0971 1117696 - 1118811 + | TRAP dicarboxylate transporter- DctP subunit Shewmr7_0972 1118967 - 1119476 + | S-ribosylhomocysteinase TERM 1339 1119548 - 1119535 - f 76 -8.1 -4.16842 | opp_overlap 1119535 GTTAGCGTCAAGAAA GCGAC ATTC GTCGC TTTTTTTTTCGAGCA TERM 1340 1119535 - 1119548 + F 100 -8.1 -6.06723 | opp_overlap 1119535 GTTAGCGTCAAGAAA GCGAC ATTC GTCGC TTTTTTTTTCGAGCA TERM 1341 1119662 - 1119673 + G 71 -7.2 -3.97308 | overlap 1119656 TTGTGATGTCGCTGA CCGC GCTA GCGG TTTCCTGTGTTTACA Shewmr7_0973 1119631 - 1121682 + | TonB-dependent receptor TERM 1342 1122448 - 1122462 + G 72 -8.6 -3.9009 | opp_overlap 1122448 ACTGGTCCGTGACAA CCTGAT CGA ATCAGG TTTATGGACTGCATT Shewmr7_0974 1122086 - 1123420 + | Na(+)-translocating NADH-quinone reductase subunit A Shewmr7_0975 1123420 - 1124619 + | Na(+)-translocating NADH-quinone reductase subunit B TERM 1343 1124631 - 1124644 + G 71 -6.7 -4.12857 | opp_overlap 1124630 CTAGTAATAAAGATT CGTTC GGCA GAACG TTATTTATCGTCGTT TERM 1344 1124741 - 1124731 - g 71 -5.4 -4.56093 | overlap 1124735 1124736 AACTCAAGCAGAAAA CAAG CTG CTTG ATAAGCAAAAGTACA Shewmr7_0976 1124612 - 1125400 + | Na(+)-translocating NADH-quinone reductase subunit C Shewmr7_0977 1125400 - 1126032 + | Na(+)-translocating NADH-quinone reductase subunit D Shewmr7_0978 1126039 - 1126647 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 1345 1127936 - 1127923 - g 74 -6.7 -4.4261 | overlap 1127917 TGTCGAAGACGAAAA CATCC TGTT GGATG ACTTCGGCGGCTAAT Shewmr7_0979 1126694 - 1127950 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 1346 1128009 - 1127976 - f 71 -9 -3.25192 | gap 1, opp_overlap 1127976, overlap 1127974 CCCAAGGTGAGAAGA GTTGCAGATGTGGAG TAAAG CTCT-CATCTGCAAC TTTTGCATTAAAGGG TERM 1347 1127976 - 1128009 + F 100 -11.9 -4.27316 | gap 1, opp_overlap 1127976 1127974 CCCAAGGTGAGAAGA GTTGCAGATGTGGAGT AAA GCTCT-CATCTGCAAC TTTTGCATTAAAGGG TERM 1348 1128116 - 1128138 + G 100 -9.8 -5.63517 | AGCATTCAGTGAACT GGCTGGTCCT TGT AGGTCTAGCC TTTTTTATTTCAGCC Shewmr7_0980 1127983 - 1129107 + | ApbE family lipoprotein Shewmr7_0981 1129119 - 1129343 + | hypothetical protein TERM 1349 1129349 - 1129395 + F 73 -5.8 -4.56597 | opp_overlap 1129363, overlap 1129363 GATCATTTAATTATC CGCTTCAACTGAAATAGCCTCC TCT GGAGGCTATTTTTTTTGCCTCG TTTTTAGCGCAGCAG TERM 1350 1129363 - 1129381 + F 100 -13.2 -5.82316 | opp_overlap 1129363, overlap 1129349 CCGCTTCAACTGAAA TAGCCTCC TCT GGAGGCTA TTTTTTTTGCCTCGT TERM 1351 1129381 - 1129363 - f 100 -13.2 -3.75153 | opp_overlap 1129363 1129349 CCGCTTCAACTGAAA TAGCCTCC TCT GGAGGCTA TTTTTTTTGCCTCGT Shewmr7_0982 1129720 - 1130193 + | bacterioferritin Shewmr7_0983 1130203 - 1130670 + | bacterioferritin TERM 1352 1130727 - 1130697 - f 100 -19.2 -2.73364 | opp_overlap 1130697 1130701, overlap 1130701 TGCGCAGCTTAAGCA CAAAGGCCAGTCAC TAA ATGACTGGCCTTTG TTTTTGGATTTTGAG TERM 1353 1130697 - 1130727 + F 100 -18.5 -4.87318 | opp_overlap 1130697 1130701, overlap 1130701 TGCGCAGCTTAAGCA CAAAGGCCAGTCA CTAAA TGACTGGCCTTTG TTTTTGGATTTTGAG TERM 1354 1130701 - 1130723 + F 100 -13.5 -4.92828 | opp_overlap 1130701 1130697, overlap 1130697 CAGCTTAAGCACAAA GGCCAGTCA CTAAA TGACTGGCC TTTGTTTTTGGATTT TERM 1355 1130723 - 1130701 - f 100 -14.2 -4.0616 | opp_overlap 1130697 1130701, overlap 1130697 CAGCTTAAGCACAAA GGCCAGTCAC TAA ATGACTGGCC TTTGTTTTTGGATTT Shewmr7_0984 1130970 - 1132973 + | methyl-accepting chemotaxis sensory transducer TERM 1356 1132994 - 1133011 + F 100 -12.7 -5.04249 | opp_overlap 1132990 1132994 AACGTTGCAAATCAA GGGAGCC TTAG GGCTCCC TTTGTTTTTTGAGCG TERM 1357 1133011 - 1132994 - f 100 -12.7 -3.51976 | opp_overlap 1132994, overlap 1132990 AACGTTGCAAATCAA GGGAGCC TTAG GGCTCCC TTTGTTTTTTGAGCG TERM 1358 1133604 - 1133594 - g 72 -8.2 -3.96216 | opp_overlap 1133593 CTCTGATTTAAATAA GCCC AAC GGGC AATGTGTTATCCCAC Shewmr7_0985 1133124 - 1134203 + | DNA polymerase IV TERM 1359 1134246 - 1134265 + T 83 -10.8 -3.551 | opp_overlap 1134246 TCCGCGCCAATCTAA CCTAGCTA AGCT TAGCTAGG TTATGTAAGTTAACG TERM 1360 1134265 - 1134246 - T 79 -10.8 -3.17075 | opp_overlap 1134246 TCCGCGCCAATCTAA CCTAGCTA AGCT TAGCTAGG TTATGTAAGTTAACG TERM 1361 1134324 - 1134350 + T 100 -9.3 -4.58585 | opp_overlap 1134324 TAAAAGCCACAAAAA GGCCGCATTGG TAAAC CCTCTGCGGCC TTTGTTATTTAAGTC TERM 1362 1134350 - 1134324 - T 100 -9.3 -4.97402 | opp_overlap 1134324 TAAAAGCCACAAAAA GGCCGCATTGG TAAAC CCTCTGCGGCC TTTGTTATTTAAGTC Shewmr7_0986 1135856 - 1134393 - | M20C family Xaa-His dipeptidase TERM 1363 1135518 - 1135538 + g 71 -7.5 -4.09685 | AATACCATTGTCGGC GCCTAAGGT TGT GCCTTTGGC TTTTACCCAGTCACC Shewmr7_0987 1136075 - 1137613 + | peptidase M17, leucyl aminopeptidase domain-containing protein TERM 1364 1137670 - 1137683 + F 71 -3.1 -5.00895 | overlap 1137633 CTTATTATAAGGTTA CAGGA TTAT TTCTG TTTTTATGTGATACA TERM 1365 1138240 - 1138258 + F 100 -14.6 -5.91981 | CTTGAAATATGTCTT GCCTGCTC ATT GAGCAGGC TTTTTTTTAGCTTTT TERM 1366 1138679 - 1138653 - g 80 -4.6 -5.19916 | gap 1 AAAATATCGAAAAAA TCACTGTG-AT GGGTAA ATACACAGTGA GTCGTAATATTGATA TERM 1367 1139787 - 1139776 - g 70 -4.4 -4.68103 | CGAATGGCAACAAAA TCAG TTTG CTGA GCCAGAGTGGTCGAG Shewmr7_0988 1138526 - 1140721 + | TonB-dependent siderophore receptor TERM 1368 1140749 - 1140772 + F 100 -10.3 -5.48787 | opp_overlap 1140739 1140744 1140749 TTAAAGCTAACATCA GCCGACGTT CCTCAT AGCGTCGGC TTTTTTATATCTTGT TERM 1369 1141131 - 1141119 - f 95 -7.7 -5.09259 | opp_overlap 1141118 TACTTTAAAAGAAAA GGAAC CCA GTTCC ATGTTAGAAAAGCTG TERM 1370 1141438 - 1141461 + G 72 -3.8 -4.79826 | opp_overlap 1141427, overlap 1141429 1141427 1141444 GAAACGGCACTCGGT GCAGTTTTCC TGTC GGGAATTTGC TTTTTAATCCTGTCT Shewmr7_0989 1141132 - 1142421 + | xanthine/uracil/vitamin C permease TERM 1371 1142459 - 1142479 + F 100 -9 -5.24531 | CAGGTCATTTTTTGA GGGTCATC TAATC GATGGCCC TTTTTTATGCGCGAT TERM 1372 1143584 - 1143570 - g 76 -5.7 -4.72272 | overlap 1143580 TTGGTTGACCAAAAA GGCAA AATCA TTGCC AGAGGCATCACTCGT Shewmr7_0990 1142598 - 1143716 + | gamma-glutamyl kinase proA 1143729 - 1145006 + | gamma-glutamyl phosphate reductase TERM 1373 1145060 - 1145073 + T 100 -9.5 -5.4505 | opp_overlap 1145060 CGTTCTATTAAAAAA GCCGC AATA GCGGC TTTTTTGTTGGCAAA TERM 1374 1145073 - 1145060 - T 100 -9.5 -5.14563 | opp_overlap 1145060 CGTTCTATTAAAAAA GCCGC AATA GCGGC TTTTTTGTTGGCAAA Shewmr7_0992 1145419 - 1145117 - | hypothetical protein Shewmr7_0993 1146020 - 1145544 - | ybaK/ebsC protein Shewmr7_0994 1147081 - 1146161 - | hypothetical protein TERM 1375 1146352 - 1146366 + g 70 -4.9 -4.74801 | AGGTACTGATATTGG CCGTG CGAGT CGCGG TTTTTAGTGCCATTA TERM 1376 1146887 - 1146907 + g 80 -3.3 -5.24129 | gap 1, overlap 1146879 1146886 1146885 CGGGCGACGTAGGAG CTG-CGCT TTAAGC AGCGGCAG TTTTTTCTGCCAAGC TERM 1377 1147843 - 1147829 - g 77 -10 -3.794 | opp_overlap 1147837 CGTCAAGCCACTAAA GATGCG GGC CGCATC GCAGGTCTTGAAGTT Shewmr7_0995 1147367 - 1149286 + | chaperone protein DnaK TERM 1378 1149296 - 1149312 + F 70 -8.1 -3.64162 | opp_overlap 1149289 1149284 AAATAACATTTGCTC TCAATCA AAT TGATTGA TTTCAAATAGTTAAT TERM 1379 1149335 - 1149363 + F 100 -15.4 -3.37612 | gap 1 TAGTTAATTTCTAGG CGGGCGTTACGGG GAAA CCC-TAACGCCCG TTCGTTCAACTTAAG TERM 1380 1150481 - 1150464 - g 73 -3.3 -5.0538 | overlap 1150466 GGTGAGTCGAAAAAA CACAGCC CAAA GGCTGAA GGCTTTTTCGATGGC TERM 1381 1150479 - 1150466 - g 76 -8.1 -4.15748 | overlap 1150464 TGAGTCGAAAAAACA CAGCC CAAA GGCTG AAGGCTTTTTCGATG Shewmr7_0996 1149396 - 1150529 + | chaperone protein DnaJ TERM 1382 1150563 - 1150615 + T 100 -12.4 -5.7946 | gap 2, opp_overlap 1150567 1150575, overlap 1150567 1150575 CGGTTAGCTGCACAC TAGATA-AATAAAGCCCTGC-AGTGT TTA ACACTAGCGGGGCTTTTTTATATCTG TTTTTTTGTTGGGAA TERM 1383 1150567 - 1150609 + T 100 -13.1 -3.46271 | opp_overlap 1150567 1150575, overlap 1150563 1150575 TAGCTGCACACTAGA TAAATAAAGCCCTGC-AGTGT TTA ACACTAGCGGGGCTTT-TTTA TATCTGTTTTTTTGT TERM 1384 1150609 - 1150567 - T 77 -10.9 -2.85668 | opp_overlap 1150563 1150567 1150575, overlap 1150575 TAGCTGCACACTAGA TAAATAAAGCCCTGC-AGTGT TTA ACACTAGCGGGGCTTT-TTTA TATCTGTTTTTTTGT TERM 1385 1150575 - 1150602 + T 100 -12.8 -5.46276 | gap 1, opp_overlap 1150575 1150567, overlap 1150567 1150563 CACTAGATAAATAAA GCCCTGC-AGTGT TTA ACACTAGCGGGGC TTTTTTATATCTGTT TERM 1386 1150602 - 1150575 - T 100 -10.6 -4.64048 | gap 1, opp_overlap 1150567 1150563 1150575, overlap 1150567 CACTAGATAAATAAA GCCCTGC-AGTGT TTA ACACTAGCGGGGC TTTTTTATATCTGTT TERM 1387 1150682 - 1150660 - T 70 -7.6 -3.65902 | CCGAGGTGAGTCAAA GTCGTGGGGC TTC ACCCCACACC CGACCAAGGAGGACT Shewmr7_0997 1151661 - 1151254 - | hypothetical protein TERM 1388 1152775 - 1152785 + H 73 -8.2 -3.6215 | opp_overlap 1152768 ATAAGAACGCTTAAT GCCC AAG GGGC TTTCAACTCCGTTGG TERM 1389 1152851 - 1152873 + H 74 -7.6 -3.91846 | overlap 1152847 AGTCCTCCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTGACTTTGATTTT TERM 1390 1152921 - 1152905 - H 73 -7.3 -4.13945 | ATTTTGATTTGAAAA TCCAAAC GAA GCTTGGA CATTGAATTATTCTC TERM 1391 1153367 - 1153385 + G 79 -11.7 -3.23216 | GTCAGTCTCGGCCTC GGCCAGC AATGC GCTGGCC TTGGTGCTCGTACCG TERM 1392 1154361 - 1154343 - g 74 -6.7 -4.33417 | gap 1, overlap 1154345 GGTACCGAGAATAAA GTG-GCGC CTAA GCGCCCAC CTCGGGATAAACAGG Shewmr7_0998 1153077 - 1154432 + | DEAD/DEAH box helicase domain-containing protein Shewmr7_0999 1154567 - 1155160 + | GCN5-related N-acetyltransferase TERM 1393 1155387 - 1155375 - g 70 -10.5 -2.87051 | overlap 1155374 GCGCGACCACTAAAT CGCCC ACG GGGCG TGGCCAAACCTTGCT Shewmr7_1000 1155302 - 1156111 + | peptidase M48, Ste24p Shewmr7_1001 1156304 - 1156921 + | peptidylprolyl isomerase, FKBP-type TERM 1394 1156933 - 1156953 + F 100 -11.2 -4.9725 | opp_overlap 1156933 CTAATGTGATCGAAA CGCCTAAG CCAGT CTTAGGCG TTTTTGTATGGAAGT TERM 1395 1156953 - 1156933 - f 84 -11.2 -3.66874 | opp_overlap 1156933 CTAATGTGATCGAAA CGCCTAAG CCAGT CTTAGGCG TTTTTGTATGGAAGT TERM 1396 1157493 - 1157483 - g 83 -3.2 -5.4492 | overlap 1157485 1157486 CACAGACATAAAAAA GACG CGC CATC TGGCACTGCGCTAAA Shewmr7_1002 1156994 - 1157806 + | dihydrodipicolinate reductase TERM 1397 1157834 - 1157809 - f 86 -9.1 -4.41047 | opp_overlap 1157816, overlap 1157816 AGGTTTGAATTAAAA TAAAAAACGCC ATTT GGCGTTTTTTT TGCACTCAGATGCCA TERM 1398 1157827 - 1157816 - f 100 -7.2 -5.85244 | opp_overlap 1157816, overlap 1157809 AATTAAAATAAAAAA CGCC ATTT GGCG TTTTTTTTGCACTCA TERM 1399 1157816 - 1157827 + F 100 -7.2 -5.78622 | opp_overlap 1157816 1157809 AATTAAAATAAAAAA CGCC ATTT GGCG TTTTTTTTGCACTCA Shewmr7_1003 1157973 - 1159133 + | carbamoyl phosphate synthase small subunit TERM 1400 1162325 - 1162292 - g 79 -11.7 -3.23692 | CACCACGACCATGAA CGCAGCATTCGCCAC TTGT ATGGCACACGCTGCG GACGACCGCACTAAC carB 1159161 - 1162385 + | carbamoyl phosphate synthase large subunit TERM 1401 1162433 - 1162409 - T 100 -18.7 -4.4078 | opp_overlap 1162409 CTTCTGTAATCAAAA GGCCGGATAAC TGA GTTATCCGGCC TTTCTTTTTGCACTC TERM 1402 1162409 - 1162433 + T 100 -18.7 -4.87389 | opp_overlap 1162409 CTTCTGTAATCAAAA GGCCGGATAAC TGA GTTATCCGGCC TTTCTTTTTGCACTC Shewmr7_1005 1163235 - 1162468 - | hypothetical protein TERM 1403 1163446 - 1163465 + r 71 -9.2 -2.94416 | opp_overlap 1163447, overlap 1163449 GACTTAGCAATAAAA AGAGCGCC CAAA GGCGCTCA TATATGCTGACGCTC TERM 1404 1163464 - 1163447 - R 100 -12.7 -5.14163 | opp_overlap 1163446 1163449 ACTTAGCAATAAAAA GAGCGCC CAAA GGCGCTC ATATATGCTGACGCT Shewmr7_1006 1164574 - 1163486 - | methyl-accepting chemotaxis sensory transducer TERM 1405 1163845 - 1163829 - G 91 -6.5 -5.08824 | opp_overlap 1163831, overlap 1163831 GTGGTATTTAAAAAA GATGCGG TCG CCGCATT GTGGATCACCTGCTG TERM 1406 1163843 - 1163831 - G 79 -9.1 -4.17608 | opp_overlap 1163831, overlap 1163829 GGTATTTAAAAAAGA TGCGG TCG CCGCA TTGTGGATCACCTGC TERM 1407 1164449 - 1164473 + g 91 -7.9 -5.1615 | gap 1 GCGGGACTGCTGTTG CATGGCCTCG TTTTCT CG-GGCCATG TTTTTTAACTCTTCA Shewmr7_1007 1165165 - 1166298 + | endonuclease/exonuclease/phosphatase Shewmr7_1008 1167154 - 1166339 - | hypothetical protein TERM 1408 1166714 - 1166737 + g 79 -11.8 -3.27774 | gap 1, opp_overlap 1166711 GGCGGGTAAGGATTG CAGCGCCGCAA AAC TTGCG-CGCTG TTCATCCTTGGCATC Shewmr7_1009 1168032 - 1167151 - | hypothetical protein TERM 1409 1167865 - 1167834 - G 79 -7.2 -4.57482 | overlap 1167835 CGATGGATAAAGAAA CGCCGTGCATCACC AGTG GATAACGCTCGGCA ATCTCACTCAGGTAA TERM 1410 1168008 - 1167998 - G 71 -5.4 -4.55128 | AGTCCTAAACCAAAA CCTA GGG TAGG GTGAGTGAGACGCTG TERM 1411 1168061 - 1168086 + r 89 -11.9 -3.32022 | overlap 1168064 GATGACTGAGTGGCT GAAGCGGCC CAGATTCC GGCCGCTTC TTCCTCTGTACCAAG TERM 1412 1168064 - 1168083 + r 72 -7.8 -3.80018 | overlap 1168061 GACTGAGTGGCTGAA GCGGCC CAGATTCC GGCCGC TTCTTCCTCTGTACC Shewmr7_1010 1168568 - 1168116 - | putative lipoprotein TERM 1413 1169543 - 1169529 - g 74 -7.8 -4.1552 | GATTCCCGTAAGAAA GAAGGC TTA GCCTCC ACCATGGGACTGCTC TERM 1414 1170178 - 1170190 + G 82 -7.7 -4.65895 | overlap 1170182 ACCCGATTGGTAGTG CCTTC CCT GAAGG TTTTTACCTCAAGGG Shewmr7_1011 1169037 - 1170227 + | SAM-dependent methyltransferase TERM 1415 1170278 - 1170257 - T 100 -10.1 -5.46657 | opp_overlap 1170257 TAGGGGAATAAAAAA TGCCGATGC AGTT GCAGCGGCA TTTTTGTTTCTCGCA TERM 1416 1170257 - 1170278 + T 100 -10.1 -5.38054 | opp_overlap 1170257 TAGGGGAATAAAAAA TGCCGATGC AGTT GCAGCGGCA TTTTTGTTTCTCGCA Shewmr7_1012 1170977 - 1170318 - | ribose-5-phosphate isomerase A TERM 1417 1171526 - 1171539 + G 78 -9.5 -3.82084 | GCGCCTTTATTCCTT GGGCG GTGA CGCCC TTGTTGATGTTCGGC Shewmr7_1013 1171273 - 1172199 + | hypothetical protein Shewmr7_1014 1172293 - 1173204 + | 3'-5' exonuclease Shewmr7_1015 1173248 - 1174216 + | hypothetical protein TERM 1418 1174638 - 1174607 - T 100 -10.2 -4.86731 | opp_overlap 1174610, overlap 1174610 CCCTGCCAAATAAAA CAACGGCTTGCATA GAAA TATGCGAGCCGTTT TATTTTGTTAGAAAA TERM 1419 1174610 - 1174635 + T 100 -14.1 -5.27476 | opp_overlap 1174607 1174610 TGCCAAATAAAACAA CGGCTTGCATA GAAA TATGCGAGCCG TTTTATTTTGTTAGA TERM 1420 1174635 - 1174610 - T 100 -11.9 -4.54026 | opp_overlap 1174610, overlap 1174607 TGCCAAATAAAACAA CGGCTTGCATA GAAA TATGCGAGCCG TTTTATTTTGTTAGA Shewmr7_1016 1175708 - 1174692 - | phage integrase family protein Shewmr7_1017 1175928 - 1175701 - | hypothetical protein TERM 1421 1176422 - 1176407 - R 84 -6.2 -4.98522 | opp_overlap 1176407 AAGTGGATATAAAAA CTTTCA CATG TGAAAG TTCTTATGCCTCAGC TERM 1422 1176760 - 1176721 - R 71 -6.6 -4.11371 | gap 2 CAATAGCGCTCAAAA CTTCCTTATCCTCTGCGC TAGGGT GCGCTGAG-ATA-GGAAG AAGAAGGCCTTGGAT TERM 1423 1176980 - 1176965 - R 74 -6.2 -4.46212 | opp_overlap 1176965 TGGTGCACTAGAAAA CTTTCA CATG TGAAAG TTTTGAGCCGACTTT Shewmr7_1018 1179079 - 1176968 - | hypothetical protein TERM 1424 1179067 - 1179052 - G 78 -6.2 -4.8667 | opp_overlap 1179052 TAGAGGGCACAAAAA CTTTCA CATG TGAAAG TTTTTTCTTCATCGA TERM 1425 1179052 - 1179067 + g 95 -6.2 -5.5112 | opp_overlap 1179052 TAGAGGGCACAAAAA CTTTCA CATG TGAAAG TTTTTTCTTCATCGA TERM 1426 1179491 - 1179464 - R 83 -11.4 -2.91695 | gap 1, overlap 1179461 GGGACCTCCAAAGGA CG-AGGGACTGAC TTG GTCAGTCCCTACA CGAGTGATTACTGGT Shewmr7_1019 1180098 - 1179499 - | hypothetical protein TERM 1427 1180384 - 1180400 + H 76 -10.9 -2.73483 | opp_overlap 1180376 CAGCATATTATTTTA GCTGAGT TCA ACTCAGC TCATTCAAATAGCCT Shewmr7_1020 1180497 - 1181063 + | hypothetical protein TERM 1428 1181410 - 1181430 + F 74 -6.9 -4.31433 | GCCGCGATCGCAGTG CCTCAAC TTTAATC GTTGAGG TTTGTTATGAACGTA TERM 1429 1181995 - 1181976 - g 100 -10.6 -4.72272 | TTGCTGGAGGAAAAA CGAGCGGG GGTT CCCGCACG CTTGCACTACCGTGT Shewmr7_1021 1181667 - 1182488 + | hypothetical protein Shewmr7_1022 1182488 - 1183207 + | replication P family protein TERM 1430 1183195 - 1183213 + T 72 -9.5 -3.07113 | opp_overlap 1183189 GAAAAAGATGTTGAA GGGCGGT AAGTA GCCGCCC TTAAATGAAATGATG Shewmr7_1023 1184910 - 1183357 - | hypothetical protein Shewmr7_1024 1185056 - 1185385 + | hypothetical protein TERM 1431 1185433 - 1185404 - f 75 -7.2 -4.3255 | opp_overlap 1185404, overlap 1185400 GGCGTAACCAACAAA TGACAAAGTCAC CTGATC GTGCCTTTGCCA TTTACCTTTCGTAAC TERM 1432 1186419 - 1186400 - f 100 -15 -2.71101 | overlap 1186397 1186396 GGTTGAAACAATTCA CCCCGCTC TATC GAGCGGGG GCCCCATCTCACAGC TERM 1433 1186465 - 1186437 - f 95 -12.5 -3.27022 | opp_overlap 1186443, overlap 1186442 1186443 CCCATCTCACAGCAA GAAAACTCCGAGC TTT GCCCGGATTTTTC TCCACACCCCACTCA TERM 1434 1186460 - 1186442 - f 82 -6.6 -4.75472 | opp_overlap 1186443, overlap 1186437 1186443 CTCACAGCAAGAAAA CTCCGAGC TTT GCCCGGAT TTTTCTCCACACCCC TERM 1435 1186459 - 1186443 - f 78 -10.1 -3.4456 | opp_overlap 1186443, overlap 1186442 1186437 TCACAGCAAGAAAAC TCCGAGC TTT GCCCGGA TTTTTCTCCACACCC TERM 1436 1186443 - 1186459 + F 91 -7.9 -4.82901 | opp_overlap 1186443 1186442 1186437 TCACAGCAAGAAAAC TCCGAGC TTT GCCCGGA TTTTTCTCCACACCC TERM 1437 1186503 - 1186516 + F 74 -9.5 -3.29144 | TGGTCTGTCTCATCC GGCGC AGTA GCGCC TTCTGAGGGGACTCC Shewmr7_1025 1186601 - 1186957 + | hypothetical protein Shewmr7_1026 1186944 - 1188917 + | hypothetical protein TERM 1438 1188953 - 1188939 - g 84 -4.2 -5.24551 | overlap 1188940 CCAAAGCAATAAAAA GTGCCT CTC AGGCAG GTCATTACTTTGAAA TERM 1439 1191067 - 1191054 - g 71 -5.2 -4.4891 | TCGACCATGAGAAAA GCGG TGAAGC CCGC AGACAAGAGCTTGTG TERM 1440 1191218 - 1191197 - g 74 -4.4 -4.79949 | GCCTTAAAAAAAGAA GGAGCTTT GGGCGA AGAGCTCC GAATTAATCAGCTAT TERM 1441 1191896 - 1191873 - g 72 -8.2 -3.922 | gap 1 AAACGGCTAAGGAAA GCAGTTACCAG TCT CTGG-AACCGC TTGACCACTTGATTG Shewmr7_1027 1188914 - 1192021 + | TrwC protein TERM 1442 1192043 - 1192072 + F 100 -14.4 -4.87803 | opp_overlap 1192042 1192041, overlap 1192033 1192032 TCTATTGTCCAAATT GGGCAGTTTGGC GTACTA GCTAAACTGCCC TTTTATTTGAAAATG Shewmr7_1028 1192181 - 1193644 + | hypothetical protein TERM 1443 1193678 - 1193691 + F 100 -9.5 -4.96501 | TACACTCTTCGTTTA GGGGC TCAT GCCCC TTTCTTTTTGTCCAA TERM 1444 1193935 - 1193915 - g 70 -8.3 -3.74693 | CTTCACGGTATTAAA GTGTGTCGA TGG TCGATACAC AAAAACGTATTGTGG Shewmr7_1029 1193790 - 1194050 + | hypothetical protein TERM 1445 1194082 - 1194072 - f 71 -4 -4.84359 | GTATTTTCAGAAAAA TCTT CAG AAGA GAGCCCAAGCCTGAT Shewmr7_1030 1194287 - 1195099 + | hypothetical protein Shewmr7_1031 1195127 - 1195513 + | hypothetical protein TERM 1446 1195562 - 1195547 - f 100 -10.4 -5.02476 | opp_overlap 1195547 ACATTTTTTAAAAAA GGCAGG TTAA CCTGCC TTTTTGCCATCTACA TERM 1447 1195547 - 1195562 + F 100 -10.4 -4.64766 | opp_overlap 1195547 ACATTTTTTAAAAAA GGCAGG TTAA CCTGCC TTTTTGCCATCTACA Shewmr7_1032 1195691 - 1196287 + | hypothetical protein Shewmr7_1033 1196726 - 1197220 + | hypothetical protein TERM 1448 1197270 - 1197282 + GF 72 -6.3 -4.2828 | opp_overlap 1197270, overlap 1197256 CGGATTTGCACCTAA TCCAT TTT ATGGA TTTTGCTCACTCGCC TERM 1449 1197476 - 1197463 - gf 84 -2.4 -5.63103 | TTTGAAGCAAAAAAA CCTT TTCGAC AAGG TAGCAGAAGACAAAG Shewmr7_1034 1197217 - 1197852 + | hypothetical protein Shewmr7_1035 1197812 - 1198972 + | hypothetical protein Shewmr7_1036 1198969 - 1199601 + | hypothetical protein TERM 1450 1199639 - 1199650 + F 78 -5.8 -4.74706 | overlap 1199637 1199647 AGAAGGATGAAGTTG CTGC ATTA GCAG TTTTTGAGTGTTGAA TERM 1451 1200255 - 1200265 + G 86 -5.4 -5.27476 | TTGTCAGGCGATCTA GTCT CCA AGAC TTTTCTTTTCTTAGG Shewmr7_1037 1199709 - 1201142 + | hypothetical protein Shewmr7_1038 1201146 - 1201628 + | hypothetical protein TERM 1452 1201855 - 1201865 + T 74 -4 -5.00027 | ATATTTGAAATTTTA TAGT CTC ACTA TTTTGTGTTTTTCCT Shewmr7_1039 1202231 - 1201863 - | hypothetical protein Shewmr7_1040 1203400 - 1202234 - | hypothetical protein TERM 1453 1203114 - 1203132 + g 76 -8.2 -4.12296 | overlap 1203115 GCAAGAGGCGCTGTT TTAACCGT CAA ACGGTTAG TTATTTGATTCTGGC TERM 1454 1203674 - 1203686 + H 77 -10.5 -3.18239 | overlap 1203668 AATCGCCATCAGGTC CCCGG TTT CCGGG TTGATCGGGTGTATC TERM 1455 1203788 - 1203810 + H 73 -7.1 -4.15565 | TCATAAGAAACTCCT TAGCTTTGT TGATC GCAAAGCTA TTTTGCCGTGGTAAA Shewmr7_1041 1204520 - 1205095 + | hypothetical protein TERM 1456 1205376 - 1205362 - f 100 -10 -4.41633 | overlap 1205359 TAGCTTCAAAAATAA CACTGC CCA GCAGTG ATGGAGTGCAACTAC TERM 1457 1205757 - 1205747 - f 75 -5.4 -4.89063 | CGATCCAAAAAGAAA TACG TGG CGTA GGCCTGATATTCAAT Shewmr7_1042 1206546 - 1207538 + | hypothetical protein TERM 1458 1207835 - 1207804 - f 100 -10.2 -4.86731 | opp_overlap 1207807, overlap 1207807 CCCTGCCAAATAAAA CAACGGCTTGCATA GAAA TATGCGAGCCGTTT TATTTTGCGCGCGAT TERM 1459 1207832 - 1207807 - f 100 -11.9 -4.54026 | opp_overlap 1207807, overlap 1207804 TGCCAAATAAAACAA CGGCTTGCATA GAAA TATGCGAGCCG TTTTATTTTGCGCGC TERM 1460 1207807 - 1207832 + F 100 -14.1 -5.07652 | opp_overlap 1207807 1207804 TGCCAAATAAAACAA CGGCTTGCATA GAAA TATGCGAGCCG TTTTATTTTGCGCGC Shewmr7_1043 1207946 - 1208245 + | hypothetical protein TERM 1461 1208277 - 1208307 + F 73 -9.7 -3.04298 | TATTTCTCTTATTTT TCGAGCGCCTTGG CTTAA CTAAGGTGCCCGA TGCTGTTTATTTTTG TERM 1462 1208640 - 1208650 + G 72 -4 -4.8622 | AACAACGGTGGTGGG CTAT GGG ATAG TTTTTCGTTACGGGG TERM 1463 1208860 - 1208846 - g 73 -5.6 -4.72986 | TATTGTGACTAAAAA GCCGCA GTA TGAGGC GCAAGGCTATTTAAA Shewmr7_1044 1208307 - 1210481 + | TonB-dependent siderophore receptor TERM 1464 1210686 - 1210703 + G 81 -12.7 -3.23466 | overlap 1210672 1210685 1210683 TGTCAGCCGTTTTGC GGCGCAC TTTT GTGCGCC TGTGTTCGTCTTTTT TERM 1465 1210765 - 1210782 + G 70 -4.8 -4.72272 | gap 1, overlap 1210749 1210766 1210771 CGCGGTCATGGCGAG C-CGCGC TCTGC GCGCGAG TTTTTAATCAAGCGC Shewmr7_1045 1210471 - 1211676 + | hypothetical protein TERM 1466 1212001 - 1211976 - T 77 -6.1 -4.63932 | gap 1, opp_overlap 1211976 CACGCCCTAATAAAA TGGCCGAGC-GC GTG ACTGTTCGGCCA TTTGGCTTGGGGATG TERM 1467 1211976 - 1212001 + T 78 -9 -3.75629 | opp_overlap 1211976 CACGCCCTAATAAAA TGGCCGAGCG CGTGAC TGTTCGGCCA TTTGGCTTGGGGATG Shewmr7_1046 1212493 - 1212026 - | Ferritin, Dps family protein Shewmr7_1047 1212722 - 1213072 + | hypothetical protein Shewmr7_1048 1213169 - 1213621 + | SSU ribosomal protein S18P alanine acetyltransferase TERM 1468 1213602 - 1213623 + T 83 -8.8 -4.07885 | TTTTGATGGATTTAG CCTTAAGC GAAACG GCTTAAGG TTTTAGAAGAAGATA TERM 1469 1213661 - 1213646 - T 100 -10.4 -6.12328 | opp_overlap 1213646 AGAAGATAAAAAAAA CAGCGC CTTA GCGCTG TTTTTTTATTGGGTT TERM 1470 1213646 - 1213661 + T 100 -10.4 -5.83226 | opp_overlap 1213646 AGAAGATAAAAAAAA CAGCGC CTTA GCGCTG TTTTTTTATTGGGTT Shewmr7_1049 1214655 - 1213690 - | lipoyl synthase Shewmr7_1050 1215305 - 1214652 - | lipoate-protein ligase B Shewmr7_1051 1215664 - 1215398 - | hypothetical protein TERM 1471 1215773 - 1215744 - R 100 -13.7 -4.57837 | opp_overlap 1215747, overlap 1215747 ATACTCCCCCAAAAA CAACTAAGCCACC CGAA GGTGGCTTAGTTT TTGTGATTCCGATTA TERM 1472 1215747 - 1215770 + r 100 -15.4 -4.98255 | opp_overlap 1215744 1215747 CTCCCCCAAAAACAA CTAAGCCACC CGAA GGTGGCTTAG TTTTTGTGATTCCGA TERM 1473 1215770 - 1215747 - R 100 -15.4 -4.40561 | opp_overlap 1215747, overlap 1215744 CTCCCCCAAAAACAA CTAAGCCACC CGAA GGTGGCTTAG TTTTTGTGATTCCGA Shewmr7_1052 1216961 - 1215786 - | penicillin-binding protein 6 Shewmr7_1053 1217948 - 1217106 - | rare lipoprotein A Shewmr7_1054 1218996 - 1217932 - | lytic murein transglycosylase B Shewmr7_1055 1220117 - 1219014 - | rod shape-determining protein RodA Shewmr7_1056 1221970 - 1220114 - | peptidoglycan glycosyltransferase Shewmr7_1057 1222501 - 1222031 - | SPOUT methyltransferase superfamily protein Shewmr7_1058 1222845 - 1222501 - | iojap-like protein Shewmr7_1059 1223586 - 1222948 - | nicotinate-nucleotide adenylyltransferase TERM 1474 1223202 - 1223183 - G 70 -9.3 -3.53012 | TGCCCTTCGGCTAAA TGCCAGC CCGGGC GCTGGCA TACCACAATATTGGC Shewmr7_1060 1224630 - 1223599 - | DNA polymerase III, delta subunit Shewmr7_1061 1225177 - 1224683 - | rare lipoprotein B TERM 1475 1225044 - 1225086 + g 73 -9.2 -3.76968 | gap 1 GTGAGTTCGCTGTAT TCGTCCGAGCTGCTCAAAC TGAGTT GATTGAGCTGCTCGGG-GA TTTGGTAGCTACGTT TERM 1476 1225155 - 1225113 - G 100 -15.1 -4.19238 | gap 2, opp_overlap 1225121, overlap 1225114 CGTTGAAGCTTAAAA CCGCAACC-T-GCGCTGGTCA TAA TGACCAGCGCCATGATTGCGA AAGCTAAGCGTTTAA TERM 1477 1225154 - 1225114 - G 100 -16.4 -3.11222 | gap 2, opp_overlap 1225121, overlap 1225113 GTTGAAGCTTAAAAC CGCAACC-T-GCGCTGGTCA TAA TGACCAGCGCCATGATTGCG AAAGCTAAGCGTTTA TERM 1478 1225121 - 1225146 + g 76 -12.7 -2.71144 | gap 1, opp_overlap 1225114 1225113 CTTAAAACCGCAACC T-GCGCTGGTCA TAA TGACCAGCGCCA TGATTGCGAAAGCTA leuS 1227816 - 1225237 - | leucyl-tRNA synthetase Shewmr7_1063 1227938 - 1228438 + | hypothetical protein TERM 1479 1228491 - 1228463 - T 100 -13.3 -3.89614 | opp_overlap 1228470, overlap 1228470 TTCAACGTGCATAAA TAAAAAACGACGC TTA GCGTCGTTTTTTT GTGAGTCATCAACAG TERM 1480 1228484 - 1228470 - T 100 -11.4 -5.72622 | opp_overlap 1228470, overlap 1228463 TGCATAAATAAAAAA CGACGC TTA GCGTCG TTTTTTTGTGAGTCA TERM 1481 1228470 - 1228484 + T 100 -11.4 -5.64274 | opp_overlap 1228463 1228470 TGCATAAATAAAAAA CGACGC TTA GCGTCG TTTTTTTGTGAGTCA Shewmr7_1064 1228994 - 1228500 - | methylation site containing protein Shewmr7_1065 1230569 - 1229010 - | apolipoprotein N-acyltransferase TERM 1482 1230513 - 1230476 - G 90 -12.1 -4.06903 | gap 1, overlap 1230477 AAGGGGCAAAGGAAA GCGCCGTACTGGCGCCTA AAA TAAACGCCAGCACGA-GC CGTAACACGCTCAGT TERM 1483 1230525 - 1230558 + g 70 -9.7 -3.33815 | gap 1, overlap 1230528 GAGCCGTAACACGCT CAGTCGGGACTTTTGT TGG GCAAAAG-CCCGAATG TTAGTTAGCACGGAT Shewmr7_1066 1231487 - 1230612 - | CBS domain-containing protein Shewmr7_1067 1231988 - 1231527 - | putative metalloprotease Shewmr7_1068 1233021 - 1231978 - | PhoH family protein TERM 1484 1232737 - 1232763 + g 73 -8.7 -3.73068 | GGCTTTATCGTCACC GCTGTCGTCCT GCTCA AGGGCGATGGC TTCTTGAATTGCCAA TERM 1485 1233271 - 1233238 - R 91 -5.4 -5.58522 | gap 2, opp_overlap 1233238 TACACAAAACAAAAA GGGCGACACTGAGGTT AACT AAAC-CA-TGTCGCCC TGATATAGGTGCTAC Shewmr7_1069 1234729 - 1233305 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 1486 1234669 - 1234689 + g 70 -9.1 -3.53012 | AAAGATCCGCCATCT TGGATGAGT CGT ACTCATTCA TTTGACAGCCCCAAG Shewmr7_1070 1235201 - 1234869 - | hypothetical protein TERM 1487 1235411 - 1235374 - H 76 -9.9 -3.33696 | CGCCTTTGTAAGCAA CTGTGAGCAAATGCCCC TCTA GCAACATTTGCTCACCG TTGAGCCGAAATTGA TERM 1488 1236475 - 1236448 - g 77 -11.4 -3.48395 | opp_overlap 1236463, overlap 1236452 ATGCGGCGCACACAA TTAACCCGTTGG CGGG CCAAGGGGTTAA CCTCGGCTTTAAAGA Shewmr7_1071 1235523 - 1236749 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 1489 1237478 - 1237507 + G 91 -7.1 -5.10665 | overlap 1237463 GTGAAAGCCATGACT CGCTTACACTCCT TTAA AGCGGAGTAAGCG TTTTGTTTGTTGCCT Shewmr7_1072 1236917 - 1237504 + | peptidyl-tRNA hydrolase TERM 1490 1237597 - 1237621 + F 77 -10.7 -2.78384 | opp_overlap 1237596 1237595 GGGTGACTATAAACT TGCTGGTGAGT GTG ACTCGCCAGCC TATCATCGAGAGAAA TERM 1491 1238105 - 1238093 - g 80 -4.7 -5.06816 | ATCCGTCAACAAAAA CGCGC TAA GGGCG GCGACAAAGACGCTA Shewmr7_1073 1237646 - 1238737 + | translation-associated GTPase TERM 1492 1239724 - 1239755 + T 100 -12.4 -5.32599 | opp_overlap 1239731, overlap 1239725 1239731 GTACCCCAGCCATAG TTAAAAAGCCCGTC CTAC GACGGGCTTTTTGC TTTTTGTCTTTTGTG TERM 1493 1239725 - 1239754 + T 100 -15.9 -3.77119 | opp_overlap 1239731, overlap 1239724 1239731 TACCCCAGCCATAGT TAAAAAGCCCGTC CTAC GACGGGCTTTTTG CTTTTTGTCTTTTGT TERM 1494 1239748 - 1239731 - T 100 -12.7 -4.71061 | opp_overlap 1239725 1239724 1239731 AGCCATAGTTAAAAA GCCCGTC CTAC GACGGGC TTTTTGCTTTTTGTC TERM 1495 1239731 - 1239748 + T 100 -12.7 -5.2197 | opp_overlap 1239731, overlap 1239725 1239724 AGCCATAGTTAAAAA GCCCGTC CTAC GACGGGC TTTTTGCTTTTTGTC TERM 1496 1239956 - 1239931 - T 100 -14.1 -5.38047 | CATCGAGATAAAAAA GCCACAGTGCT TAAT AACACTGTGGC TGACTAACACCGACA TERM 1497 1240004 - 1239992 - T 86 -9.1 -4.29432 | opp_overlap 1239992 1239994 GAAATGCGACTAAAA CGCTC GCA GAGCG TAGATTAGTTATTAT Shewmr7_1074 1240651 - 1240016 - | hypothetical protein TERM 1498 1240417 - 1240400 - G 76 -6.3 -4.5954 | gap 1, opp_overlap 1240400 1240399 1240402 1240412 CGATACCATATAAAA CAGC-GGA CCT TCCTGCTG GATTTTATCGGCAGT Shewmr7_1075 1241120 - 1241653 + | hypothetical protein Shewmr7_1076 1241667 - 1242182 + | lysozyme Shewmr7_1077 1242212 - 1243030 + | hypothetical protein TERM 1499 1243053 - 1243076 + F 100 -14 -4.09739 | overlap 1243070 CTTTAACGCTCCCCA TGCCCACAAA TTCA TTTGTGGGCA TTTTGCCCCACTTAA TERM 1500 1243385 - 1243362 - g 80 -9.6 -4.08064 | AACGTCGCCCGAAAA TCACTGAAGC GATT GCCTCAGCGA GAGAGTTAGGCGATC Shewmr7_1078 1243277 - 1243753 + | transcription elongation factor GreA TERM 1501 1243807 - 1243793 - f 75 -8.5 -3.8211 | opp_overlap 1243793 GTTTACCGATAAGAA GCCGC CTAGC GCGGC TTTTTTATGGCTTTT TERM 1502 1243793 - 1243807 + F 100 -8.5 -5.35222 | opp_overlap 1243793 GTTTACCGATAAGAA GCCGC CTAGC GCGGC TTTTTTATGGCTTTT Shewmr7_1079 1244067 - 1244594 + | hypothetical protein TERM 1503 1245039 - 1245057 + G 78 -9.6 -3.9243 | ATACGTTGTGCTTAT CGTCACGA TTA TCGTGATG TTATTTAGCGCCTTA TERM 1504 1245139 - 1245119 - g 74 -11.9 -2.71791 | opp_overlap 1245114, overlap 1245118 AGGTGGGCGCTAAAG CGGGGCTTA ATT TAAGCCCCA TCGAACTGCGGGATA secD 1244974 - 1246848 + | preprotein translocase subunit SecD secF 1246851 - 1247735 + | preprotein translocase subunit SecF TERM 1505 1247776 - 1247745 - T 100 -21.8 -4.16943 | opp_overlap 1247745 1247750, overlap 1247750 CCGTAGACGTTAAAA CAAAACGGCCACTC ATTT GAGTGGCCGTTTTG TTTAAGGCTGGAAAA TERM 1506 1247745 - 1247776 + T 100 -21.8 -3.57144 | opp_overlap 1247745 1247750, overlap 1247750 CCGTAGACGTTAAAA CAAAACGGCCACTC ATTT GAGTGGCCGTTTTG TTTAAGGCTGGAAAA TERM 1507 1247771 - 1247750 - T 100 -15.9 -5.09259 | opp_overlap 1247745 1247750, overlap 1247745 GACGTTAAAACAAAA CGGCCACTC ATTT GAGTGGCCG TTTTGTTTAAGGCTG TERM 1508 1247750 - 1247771 + T 100 -15.9 -4.87803 | opp_overlap 1247750 1247745, overlap 1247745 GACGTTAAAACAAAA CGGCCACTC ATTT GAGTGGCCG TTTTGTTTAAGGCTG Shewmr7_1082 1248091 - 1247792 - | hypothetical protein TERM 1509 1247896 - 1247912 + g 83 -5.1 -5.14477 | GAGTTTCACGTACTA TGGCATC AAC GATGGCA TTTTTTAGCTCTCTG TERM 1510 1248329 - 1248316 - g 71 -6.7 -4.26344 | AGAGCTTCAGCAAAA GGATC AATT GATCC GCCCAGGTATGACGG rrmJ 1248182 - 1248811 + | 23S rRNA methyltransferase J TERM 1511 1249154 - 1249176 + G 70 -4.8 -4.73297 | opp_overlap 1249148 1249138 1249156, overlap 1249147 1249156 GCCAAGAAGCCGAAG AATCGGGGTT CTT AACCCAGATC TTTATTTCTTGGTTC Shewmr7_1084 1248841 - 1250814 + | membrane protease FtsH catalytic subunit TERM 1512 1250828 - 1250856 + F 91 -8.2 -4.70583 | opp_overlap 1250831 1250836, overlap 1250831 1250836 AATGGTTGTTAATTG AAAGAGAACCCC GTTAA GGGGTTTTCTTG TTTTATCTTGCTAGA TERM 1513 1250853 - 1250831 - f 72 -7.7 -3.75153 | opp_overlap 1250831 1250828 1250836, overlap 1250836 GGTTGTTAATTGAAA GAGAACCCC GTTAA GGGGTTTTC TTGTTTTATCTTGCT TERM 1514 1250831 - 1250853 + F 100 -9.9 -4.45115 | opp_overlap 1250831 1250836, overlap 1250828 1250836 GGTTGTTAATTGAAA GAGAACCCC GTTAA GGGGTTTTC TTGTTTTATCTTGCT TERM 1515 1250836 - 1250848 + F 87 -6.2 -5.12916 | opp_overlap 1250831 1250836, overlap 1250831 1250828 TTAATTGAAAGAGAA CCCC GTTAA GGGG TTTTCTTGTTTTATC Shewmr7_1085 1250973 - 1251806 + | dihydropteroate synthase TERM 1516 1252057 - 1252075 + G 71 -11 -2.75844 | overlap 1252056 CGGTTATATGTTTGA GTCTGCCT TAG AGGCAGGC CTTTCGGCTGCGGGC Shewmr7_1086 1251881 - 1253218 + | phosphoglucosamine mutase Shewmr7_1087 1253412 - 1254194 + | triosephosphate isomerase secG 1254196 - 1254528 + | preprotein translocase subunit SecG TERM 1517 1254525 - 1254504 - f 70 -5.9 -4.32201 | overlap 1254497 TCAAGCAACCGAAAA GTCAGAAAC TAAA ATTCCTGAC TAGTAAAAGGTATCG TERM 1518 1254846 - 1254861 + F 100 -6.8 -5.60689 | opp_overlap 1254846 TCTTGAAGCTAATAA CCTCGT CATT ACGGGG TTTTTTGTTGTCTGG TERM 1519 1254916 - 1254929 + F 100 -8.1 -6.04324 | TACGGCGTTTTACTA GGGCT ATTA AGCCC TTTTTTGTTTTTTCG Shewmr7_1089 1254955 - 1255410 + | hypothetical protein TERM 1520 1255932 - 1255922 - g 70 -8.2 -3.68569 | opp_overlap 1255922 1255920 TGACTTAGGCAATAA CGCC GAC GGCG TATTGTTCCGTGAAG TERM 1521 1256182 - 1256200 + G 70 -9.6 -3.22521 | opp_overlap 1256175, overlap 1256178 AATCAAACGACCGTC GCATCGAT CCA ATCGGTGC TTGCGTTGGTATGCG nusA 1255440 - 1256939 + | transcription elongation factor NusA TERM 1522 1257769 - 1257744 - g 86 -6.1 -5.06414 | TGCGCGTAACAAAAA TACCGCCAAGT CCAA ACGTGGTGGTA AAGATGCTCGCGATG infB 1256965 - 1259622 + | translation initiation factor IF-2 TERM 1523 1259651 - 1259630 - f 100 -11.5 -4.0616 | opp_overlap 1259632, overlap 1259632 CACTGTAACGATAAA GAGGGCGGC ATTA GCCGCCCTT TCAATTTAATACATT TERM 1524 1259632 - 1259649 + F 100 -14.1 -3.87149 | opp_overlap 1259632 1259630 CTGTAACGATAAAGA GGGCGGC ATTA GCCGCCC TTTCAATTTAATACA TERM 1525 1259649 - 1259632 - f 100 -14.1 -3.6217 | opp_overlap 1259632, overlap 1259630 CTGTAACGATAAAGA GGGCGGC ATTA GCCGCCC TTTCAATTTAATACA rbfA 1259685 - 1260125 + | ribosome-binding factor A Shewmr7_1093 1260125 - 1261078 + | tRNA pseudouridine synthase B rpsO 1261204 - 1261473 + | 30S ribosomal protein S15 TERM 1526 1261491 - 1261519 + T 100 -17.7 -3.07994 | opp_overlap 1261498, overlap 1261498 ACGCGTTTACTGACG TAAAAAAGGAGGC TAA GCCTCCTTTTTTA TTGCCTCAAATTCAG TERM 1527 1261498 - 1261512 + T 100 -11.4 -5.4833 | opp_overlap 1261498, overlap 1261491 TACTGACGTAAAAAA GGAGGC TAA GCCTCC TTTTTTATTGCCTCA TERM 1528 1261512 - 1261498 - T 100 -11.4 -5.09895 | opp_overlap 1261491 1261498 TACTGACGTAAAAAA GGAGGC TAA GCCTCC TTTTTTATTGCCTCA Shewmr7_1095 1263615 - 1261561 - | diguanylate cyclase/phosphodiesterase TERM 1529 1265655 - 1265624 - g 71 -5.2 -4.4715 | gap 1, overlap 1265649 1265650 GGTGAAGCGACAAAA GAAGCGAT-TCGCCG TAT CGAAGAAATCACTTC AGAAGTTGAAGTGGG Shewmr7_1096 1263809 - 1265908 + | polynucleotide phosphorylase/polyadenylase TERM 1530 1265953 - 1265982 + F 100 -12.3 -4.53439 | opp_overlap 1265959, overlap 1265959 TTTGATATGACGTGA CTAAAAGGAGATC AATT GATCTCCTTTTTG TTTGTTTAGGTTTAA TERM 1531 1265959 - 1265976 + F 100 -9.9 -5.5454 | opp_overlap 1265959, overlap 1265953 ATGACGTGACTAAAA GGAGATC AATT GATCTCC TTTTTGTTTGTTTAG TERM 1532 1265976 - 1265959 - f 93 -9.9 -4.2717 | opp_overlap 1265953 1265959 ATGACGTGACTAAAA GGAGATC AATT GATCTCC TTTTTGTTTGTTTAG TERM 1533 1266135 - 1266150 + G 75 -10.4 -3.38072 | CGCTGTTGTTGCTGT GCTGGC GGGT GCCAGC TTGATGTTGGCTGGA Shewmr7_1097 1266100 - 1267002 + | lipoprotein NlpI TERM 1534 1267011 - 1267030 + F 90 -11.4 -3.64822 | opp_overlap 1267007 AAAATAAGCCATATC GCCCGAGG TACA TCTCGGGC TTTACCTAGCCAAGT TERM 1535 1267055 - 1267072 + F 86 -6.9 -5.03314 | CCAAGTACGCACTGA GGCGCTA TAAT TTGCGCC TTTTTTAGCGATACG prfC 1267102 - 1268682 + | peptide chain release factor 3 TERM 1536 1268701 - 1268731 + F 83 -11.3 -2.94194 | opp_overlap 1268708, overlap 1268708 GGCAAGTTCTCTCGT TAAAGAAGGCGGT AAATC ACCGCCTTTTTTG TCTCTAAAATTTGTG TERM 1537 1268708 - 1268724 + F 100 -9.4 -5.4251 | opp_overlap 1268708, overlap 1268701 TCTCTCGTTAAAGAA GGCGGT AAATC ACCGCC TTTTTTGTCTCTAAA TERM 1538 1268724 - 1268708 - f 84 -10.1 -3.90744 | opp_overlap 1268708 1268701 TCTCTCGTTAAAGAA GGCGGTA AAT CACCGCC TTTTTTGTCTCTAAA TERM 1539 1269393 - 1269407 + G 74 -7.1 -4.38712 | opp_overlap 1269382 1269381 AAACTCGCCAAAGGT GGCGT AATAC ACGCC TTTTCTGGCAGTCCC TERM 1540 1269678 - 1269651 - g 91 -3.4 -5.75945 | opp_overlap 1269655, overlap 1269652 1269655 ACTTTGCAAAAAAAA TCTAGTGTTCTA ATAT CAGAACACTTGG TGTCGAATGCAATGC Shewmr7_1099 1268943 - 1269710 + | TatD-related deoxyribonuclease TERM 1541 1269974 - 1269962 - g 86 -3.4 -5.64873 | TCGAATAACAAAAAA GCAA TTAAC TTGC GTACTGTGGGTGGTG TERM 1542 1270857 - 1270845 - g 71 -6.3 -4.37886 | opp_overlap 1270844 1270845 TCATCGGTCAGAAAA TCGTT GTT AACGA ATTCGTTGCTTACCT Shewmr7_1100 1269887 - 1271146 + | nucleoside transporter TERM 1543 1271183 - 1271207 + F 80 -11.4 -2.60244 | overlap 1271180 1271180 GATCCCCGCTAACTG GGTCCTGACC ATGCA GGGCAGGACC TAAGTTAATTCAACC TERM 1544 1271459 - 1271440 - f 73 -5.7 -4.52873 | overlap 1271441 GCGCCACAAAAAGAA CGCTACC CTAGAT GGTAGCA AACAAAATAATGGGG TERM 1545 1271981 - 1271968 - g 71 -6.7 -4.18018 | CTTGGTTAGGCAAAA CAGGT ATGA ACCTG TACGGTTACTACGAC Shewmr7_1101 1271481 - 1272320 + | nucleoside-specific channel-forming protein, Tsx TERM 1546 1272336 - 1272361 + F 100 -14.7 -4.62984 | opp_overlap 1272333, overlap 1272338 TTTCTTGTAAGAGCC GTTGGAGCCGC GATG GCGGCTCCATC TTTTATGTGTCATGA TERM 1547 1272338 - 1272359 + F 100 -15.9 -3.92276 | opp_overlap 1272333, overlap 1272336 TCTTGTAAGAGCCGT TGGAGCCGC GATG GCGGCTCCA TCTTTTATGTGTCAT Shewmr7_1102 1272733 - 1273503 + | deoxyribose-phosphate aldolase TERM 1548 1274142 - 1274184 + G 70 -2.7 -4.7497 | gap 1, overlap 1274148 AAGACGTTGGTGTGG CGATTATCGGC-CAAACTGG CGAT CTGGTTCCCGCCGATAAACG TTTTTACTCCATCCG TERM 1549 1274967 - 1274945 - g 86 -7.1 -5.03145 | gap 1 GAAGCCGTGAAAAAA GCGA-TTCGT ATCG ACGAAGTCGC TCCAGAAAAAACACC deoA 1273688 - 1275019 + | thymidine phosphorylase Shewmr7_1104 1275029 - 1276243 + | phosphopentomutase deoD 1276335 - 1277045 + | purine nucleoside phosphorylase TERM 1550 1277091 - 1277073 - T 100 -14.6 -5.60993 | opp_overlap 1277073 CTCGTTATAAAAAAA GGGTTCGC ATT GCGAACCC TTTTTTATTGCCTCG TERM 1551 1277073 - 1277091 + T 100 -14.6 -5.4833 | opp_overlap 1277073 CTCGTTATAAAAAAA GGGTTCGC ATT GCGAACCC TTTTTTATTGCCTCG Shewmr7_1106 1278434 - 1277214 - | membrane protein Shewmr7_1107 1278514 - 1279506 + | phosphoserine phosphatase Shewmr7_1108 1279589 - 1280590 + | alpha/beta hydrolase fold TERM 1552 1280607 - 1280585 - T 77 -8.4 -4.07568 | opp_overlap 1280587, overlap 1280587 TTGGCGGTGTTAAAA GACTAGGGCG ATG CACCCTAGTT TATTTTTGCAGCGCA TERM 1553 1280605 - 1280587 - T 84 -11 -3.63744 | opp_overlap 1280587, overlap 1280585 GGCGGTGTTAAAAGA CTAGGGCG ATG CACCCTAG TTTATTTTTGCAGCG TERM 1554 1280587 - 1280605 + T 100 -8.8 -4.85782 | opp_overlap 1280587 1280585 GGCGGTGTTAAAAGA CTAGGGCG ATG CACCCTAG TTTATTTTTGCAGCG Shewmr7_1109 1282979 - 1280607 - | type IV pilus assembly PilZ TERM 1555 1282617 - 1282634 + g 78 -6.3 -4.83615 | GACGCTATCGGTTTG TTGTGTC ACCT GACGCAA TTTTTGTCGCCGCTG Shewmr7_1110 1283081 - 1284445 + | DNA repair protein RadA TERM 1556 1284483 - 1284455 - T 100 -14.7 -4.38129 | opp_overlap 1284461, overlap 1284461 ATATAATCATCAAAA CAAAAACAGCGCC AAG GGCGCTGTTTTTT ATGATGTCGTTGGCT TERM 1557 1284461 - 1284477 + T 100 -13.7 -5.34555 | opp_overlap 1284455 1284461 TCATCAAAACAAAAA CAGCGCC AAG GGCGCTG TTTTTTATGATGTCG TERM 1558 1284477 - 1284461 - T 100 -13.7 -5.50723 | opp_overlap 1284461, overlap 1284455 TCATCAAAACAAAAA CAGCGCC AAG GGCGCTG TTTTTTATGATGTCG TERM 1559 1284504 - 1284520 + T 80 -6.5 -4.83032 | opp_overlap 1284505, overlap 1284496 1284499 1284505 GTCGTTGGCTTATAA AGCTGTG TCA CACAGCA TTTTATCTTTAATCT TERM 1560 1284519 - 1284505 - T 84 -10 -3.85698 | opp_overlap 1284496 1284504 1284499 1284505 TCGTTGGCTTATAAA GCTGTG TCA CACAGC ATTTTATCTTTAATC TERM 1561 1284505 - 1284519 + T 78 -10 -3.48193 | opp_overlap 1284505, overlap 1284496 1284504 1284499 TCGTTGGCTTATAAA GCTGTG TCA CACAGC ATTTTATCTTTAATC Shewmr7_1111 1284921 - 1284529 - | type IV pilus assembly PilZ Shewmr7_1112 1285101 - 1285811 + | DNA-binding transcriptional regulator TorR Shewmr7_1113 1286957 - 1285890 - | periplasmic sensory protein associated with the TorRS two-component regulatory system TERM 1562 1286018 - 1286008 - G 76 -8.2 -4.13014 | opp_overlap 1286001 1286012 CCTATATCGCCAAAA GGCG CAG CGCC TTCGAGCTGTTTTAC TERM 1563 1288373 - 1288347 - g 72 -3.6 -4.75174 | overlap 1288339 1288357 CATTTAAGCGAAAAA CCGCCCATAACC TGA AATTGCAGGCGG ATTTACGCCAGGTGG Shewmr7_1114 1287014 - 1290067 + | multi-sensor hybrid histidine kinase TERM 1564 1290190 - 1290211 + T 100 -11.5 -3.97659 | opp_overlap 1290191, overlap 1290191 ATCGAGGAATAAAAA AGCGGCTCC CATG GGAGCCGCA TTTCGTTAACTTATT TERM 1565 1290191 - 1290210 + T 100 -15 -2.97511 | opp_overlap 1290191, overlap 1290190 TCGAGGAATAAAAAA GCGGCTCC CATG GGAGCCGC ATTTCGTTAACTTAT TERM 1566 1290210 - 1290191 - T 100 -15 -5.5112 | opp_overlap 1290190 1290191 TCGAGGAATAAAAAA GCGGCTCC CATG GGAGCCGC ATTTCGTTAACTTAT torD 1291000 - 1290371 - | chaperone protein TorD TERM 1567 1291058 - 1291021 - R 71 -9.1 -3.36273 | opp_overlap 1291025 1291025 1291033, overlap 1291023 1291024 GTTCCTCAAGATTAA CAGTGGAATGCGCCTAG TTGA CTAGGCGCATCGCCTTG TGGGCTCGGTTAGAT TERM 1568 1291055 - 1291023 - R 74 -9.2 -3.25073 | gap 1, opp_overlap 1291025 1291025 1291033, overlap 1291021 1291024 TCCTCAAGATTAACA GTGGAATGCGCCTAG TTGA CTAGGCGCATCGC-C TTGTGGGCTCGGTTA TERM 1569 1291025 - 1291054 + r 76 -10.7 -2.6006 | opp_overlap 1291023 1291024 1291021, overlap 1291025 1291033 CTCAAGATTAACAGT GGAATGCGCCTAG TTGA CTAGGCGCATCGC CTTGTGGGCTCGGTT TERM 1570 1291025 - 1291055 + r 78 -10.5 -3.33969 | gap 1, opp_overlap 1291023 1291024 1291021, overlap 1291025 1291033 CTCAAGATTAACAGT GG-AATGCGCCTAG TTGA CTAGGCGCATCGCC TTGTGGGCTCGGTTA Shewmr7_1116 1293557 - 1291068 - | trimethylamine-N-oxide reductase TorA Shewmr7_1117 1294751 - 1293573 - | trimethylamine-N-oxide reductase c-type cytochrome TorC Shewmr7_1118 1294948 - 1294778 - | periplasmic nitrate reductase NapE TERM 1571 1296347 - 1296333 - g 72 -8.6 -3.86194 | AATCTGCTGGATAAA GACGAT AAT ATCGTC GGCGGTGGCAAGGCG Shewmr7_1119 1295466 - 1296818 + | xanthine/uracil/vitamin C permease TERM 1572 1296873 - 1296839 - T 84 -10 -3.86015 | opp_overlap 1296846, overlap 1296840 1296846 TACTCCCTCTATAAA GTCGAAAGCGAGTGCC ATT AGCACTCGCTTTCATT GACCTCATTGTGTTC TERM 1573 1296872 - 1296840 - T 100 -13.5 -2.91395 | opp_overlap 1296846, overlap 1296839 1296846 ACTCCCTCTATAAAG TCGAAAGCGAGTGCC ATT AGCACTCGCTTTCAT TGACCTCATTGTGTT TERM 1574 1296866 - 1296846 - T 100 -13.3 -3.74347 | opp_overlap 1296846, overlap 1296840 1296839 TCTATAAAGTCGAAA GCGAGTGCC ATT AGCACTCGC TTTCATTGACCTCAT TERM 1575 1296846 - 1296866 + T 100 -12.6 -3.92178 | opp_overlap 1296846 1296840 1296839 TCTATAAAGTCGAAA GCGAGTGC CATTA GCACTCGC TTTCATTGACCTCAT Shewmr7_1120 1297287 - 1296856 - | CBS domain-containing protein TERM 1576 1297034 - 1297056 + g 70 -2.7 -4.8667 | gap 1 ACGGTAACGGGATTA CG-GGTCATC ACCT GATGAACGCG TTTTTGTAGGGTCTC TERM 1577 1297164 - 1297189 + g 90 -13.3 -3.68351 | CTTCGAGTTTATATT CATCCACCACC AGCA GGTGGTGGAAG TTTGCCTGATCGAAA Shewmr7_1121 1299278 - 1297389 - | phospholipid/glycerol acyltransferase TERM 1578 1299007 - 1298974 - G 71 -5.9 -4.35926 | ACGGTAAAGCTAAAA TCGAAGCTGGCGAGC ACTT GCTCGACAAAATCGA CCCCTTGCAGATAGG Shewmr7_1122 1300363 - 1299281 - | metallophosphoesterase Shewmr7_1123 1300682 - 1301278 + | phage integrase family protein TERM 1579 1302939 - 1302956 + G 70 -2.7 -4.77567 | overlap 1302940 AGTTTGGGCGCATTA GGTGATA GGAA TATCACA TTTTATTATCAGCCT TERM 1580 1303935 - 1303954 + G 78 -5.7 -4.86862 | opp_overlap 1303906 AGTGCTCCAACTTAT CCATTCC ATACTG GGGATGG TTTTCATTTTTTCCA TERM 1581 1306588 - 1306576 - g 74 -6.9 -4.30576 | GCGTTACCAGTAAAA CCACC ACG GGCGG CAGTGCGCCAGGTAC TERM 1582 1307410 - 1307429 + G 76 -8.6 -4.12532 | gap 1 CACTGAGCGTCTCTG GC-CGTGGT GCC ACCACGAGC TTTGTCTATGGCAGC Shewmr7_1124 1301496 - 1308701 + | YD repeat-containing protein Shewmr7_1125 1308717 - 1309277 + | hypothetical protein TERM 1583 1309340 - 1309357 + F 100 -8.4 -5.28561 | TCTTTTTGCCAGTCA GCCCCA TCTCCT TGGGGC TTTTTCTTGTCTATT TERM 1584 1309794 - 1309832 + G 100 -9.7 -5.39721 | gap 1 TGATGCTAATGCAAC GCCCTTCTATCAT-GTGA TAAA TCGCTGTGTTAGAAGGGC TTTTTTGTGTGGTGA Shewmr7_1126 1309753 - 1310787 + | hypothetical protein Shewmr7_1127 1311146 - 1311499 + | hypothetical protein Shewmr7_1128 1311529 - 1311846 + | antibiotic biosynthesis monooxygenase TERM 1585 1312060 - 1312096 + T 70 -8 -3.63782 | opp_overlap 1312066, overlap 1312066 1312086 1312089 TGTTTGACTTAGTAT AAAAAAGGGGAGTCAG TTAAT CTGACTCCCCTTGATA TTTAAGGTGATGTTG TERM 1586 1312090 - 1312066 - T 100 -15.8 -5.31877 | opp_overlap 1312066 1312060 1312086 1312089 ACTTAGTATAAAAAA GGGGAGTCAG TTAAT CTGACTCCCC TTGATATTTAAGGTG TERM 1587 1312066 - 1312090 + T 100 -15.8 -3.46285 | opp_overlap 1312066, overlap 1312060 1312086 1312089 ACTTAGTATAAAAAA GGGGAGTCAG TTAAT CTGACTCCCC TTGATATTTAAGGTG Shewmr7_1129 1313473 - 1312115 - | nucleoside recognition domain-containing protein Shewmr7_1130 1313660 - 1313463 - | hypothetical protein TERM 1588 1313847 - 1313858 + H 78 -2.2 -5.58074 | GATTCTTCGAATATT CAGC TTTT GTTG TTTTTTTGGTCGTTA TERM 1589 1314457 - 1314467 + G 79 -8.2 -4.32067 | CCGTGAGTGGTTTTT GGGG ATA CCCC TTCTTTTGTGCGCTG TERM 1590 1314852 - 1314891 + G 100 -20.2 -2.7185 | opp_overlap 1314855, overlap 1314855 CTGCTGTTCACCCCA CAATCACTCGCTCAGGAG CCTG CTCCCGAGTGAGTGATTG TGATTAACCCATAAT TERM 1591 1314855 - 1314888 + G 100 -16.1 -3.51032 | opp_overlap 1314855, overlap 1314852 CTGTTCACCCCACAA TCACTCGCTCAGGAG CCTG CTCCCGAGTGAGTGA TTGTGATTAACCCAT TERM 1592 1314888 - 1314855 - g 95 -16.1 -3.32844 | opp_overlap 1314855 1314852 CTGTTCACCCCACAA TCACTCGCTCAGGAG CCTG CTCCCGAGTGAGTGA TTGTGATTAACCCAT Shewmr7_1131 1314177 - 1314884 + | hypothetical protein Shewmr7_1132 1315780 - 1314911 - | peptidase U32 Shewmr7_1133 1316813 - 1315812 - | peptidase U32 TERM 1593 1316226 - 1316250 + g 74 -10 -3.60792 | gap 1, opp_overlap 1316241 CCAGCGCACGTGTTT CGCTGGCGAGC AAGA GC-CGCCAGTG TTTGGCGATTGACCG Shewmr7_1134 1316952 - 1317488 + | sterol-binding domain-containing protein TERM 1594 1317554 - 1317514 - T 100 -21.5 -2.60244 | opp_overlap 1317518 1317524, overlap 1317518 1317524 GCTGTAACCAAGTGA TAAACAAAAAGCCCCGC TGACATT GCGGGGCTTTTTGTTTA GCTTAAACGGCTGAT TERM 1595 1317550 - 1317518 - T 100 -17.9 -3.99898 | opp_overlap 1317518 1317524, overlap 1317514 1317524 TAACCAAGTGATAAA CAAAAAGCCCCGC TGACATT GCGGGGCTTTTTG TTTAGCTTAAACGGC TERM 1596 1317518 - 1317550 + T 100 -17.9 -3.75153 | opp_overlap 1317518 1317514 1317524, overlap 1317524 TAACCAAGTGATAAA CAAAAAGCCCCGC TGACATT GCGGGGCTTTTTG TTTAGCTTAAACGGC TERM 1597 1317544 - 1317524 - T 100 -11.1 -5.38958 | opp_overlap 1317518 1317524, overlap 1317518 1317514 AGTGATAAACAAAAA GCCCCGC TGACATT GCGGGGC TTTTTGTTTAGCTTA TERM 1598 1317524 - 1317544 + T 100 -11.1 -5.33026 | opp_overlap 1317524 1317518 1317514, overlap 1317518 AGTGATAAACAAAAA GCCCCGC TGACATT GCGGGGC TTTTTGTTTAGCTTA Shewmr7_1135 1317827 - 1317576 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shewmr7_1136 1319195 - 1317831 - | peptidase U32 Shewmr7_1137 1319547 - 1320386 + | putative signal transduction protein Shewmr7_1138 1320472 - 1321998 + | diguanylate cyclase/phosphodiesterase Shewmr7_1139 1322400 - 1321987 - | thioesterase superfamily protein TERM 1599 1322552 - 1322527 - R 100 -12.7 -5.07011 | opp_overlap 1322527 TACACAAAGTAAAAA GCCATATTCGC CGAA ACGAATATGGC TTTTTTGTAGGGTAA TERM 1600 1322527 - 1322552 + r 100 -12 -5.26316 | opp_overlap 1322527 TACACAAAGTAAAAA GCCATATTCG CCGAAA CGAATATGGC TTTTTTGTAGGGTAA Shewmr7_1140 1323845 - 1322589 - | adenylosuccinate synthetase TERM 1601 1323192 - 1323206 + g 70 -2.8 -4.86033 | opp_overlap 1323192 TTGCGCTTCAAATAG CAAGTT AGC ATCTTG TTTTTGTAAGGCTTT Shewmr7_1141 1323962 - 1324873 + | LysR family transcriptional regulator Shewmr7_1142 1325707 - 1324889 - | extracellular solute-binding protein TERM 1602 1325245 - 1325257 + g 74 -7.7 -4.15222 | CGACTATGCTGCCTT TGGGA ATT TCCCA TTTATTGGCGGCGAT TERM 1603 1325314 - 1325301 - G 72 -3.7 -4.82901 | opp_overlap 1325309 TTGCGTTGATAAAAA GAGGC TTTC GCCAC AAATAGCGGCGTGTT TERM 1604 1325787 - 1325833 + H 76 -10.4 -2.93236 | overlap 1325802 ATCATTTTGCGATTT GTGATGTGGTCTAGATTGTTTT TTG AAAACAATTTAGGCCATAAAAC TGTGATCTTAAGTTG Shewmr7_1143 1325910 - 1326338 + | OsmC family protein TERM 1605 1326401 - 1326370 - T 100 -14.6 -4.09243 | opp_overlap 1326377, overlap 1326371 1326373 1326377 GATAGCGGCTTAAAA GCATAAACCCCAGT GTTT ACTGGGGTTTATGT CAATGGTTATATGCT TERM 1606 1326400 - 1326371 - T 100 -18.1 -3.05224 | opp_overlap 1326377, overlap 1326370 1326373 1326377 ATAGCGGCTTAAAAG CATAAACCCCAGT GTTT ACTGGGGTTTATG TCAATGGTTATATGC TERM 1607 1326398 - 1326373 - T 100 -14.9 -3.08211 | opp_overlap 1326377, overlap 1326371 1326370 1326377 AGCGGCTTAAAAGCA TAAACCCCAGT GTTT ACTGGGGTTTA TGTCAATGGTTATAT TERM 1608 1326377 - 1326394 + T 100 -11.3 -4.07526 | opp_overlap 1326373 1326371 1326370 1326377 GCTTAAAAGCATAAA CCCCAGT GTTT ACTGGGG TTTATGTCAATGGTT TERM 1609 1326394 - 1326377 - T 100 -11.3 -4.208 | opp_overlap 1326377, overlap 1326373 1326371 1326370 GCTTAAAAGCATAAA CCCCAGT GTTT ACTGGGG TTTATGTCAATGGTT Shewmr7_1144 1327047 - 1326427 - | TetR family transcriptional regulator TERM 1610 1327447 - 1327459 + G 71 -6.9 -4.13654 | overlap 1327448 GATATTGATGTTGAC TGCCG TGG CGGCG TTTGTCCTTTCGGCC Shewmr7_1145 1327409 - 1328647 + | RND family efflux transporter MFP subunit Shewmr7_1146 1328661 - 1331810 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 1611 1331842 - 1331859 + F 100 -11.3 -5.82388 | opp_overlap 1331815 1331842 TGTTAACCTTAAAAA GACCTGC AAAT GCAGGTC TTTTTTTTCGGCTTT TERM 1612 1331859 - 1331842 - f 100 -11.3 -4.66833 | opp_overlap 1331842, overlap 1331815 TGTTAACCTTAAAAA GACCTGC AAAT GCAGGTC TTTTTTTTCGGCTTT TERM 1613 1331890 - 1331913 + F 88 -12.6 -2.57192 | opp_overlap 1331890, overlap 1331886 AGCGGCTAAATATAA CTGATCTAAC TATA GTTAGATCAG TGCGTTAAATTAGGT TERM 1614 1331913 - 1331890 - f 100 -12.6 -3.81755 | opp_overlap 1331890 1331886 AGCGGCTAAATATAA CTGATCTAAC TATA GTTAGATCAG TGCGTTAAATTAGGT Shewmr7_1147 1331936 - 1333204 + | metal dependent phosphohydrolase Shewmr7_1148 1333698 - 1333225 - | hypothetical protein TERM 1615 1334101 - 1334069 - R 100 -19.4 -3.6715 | opp_overlap 1334075, overlap 1334075 TTACTCAAGCGTAAA TGAAAAGCCAAGGG GGATT CCCTTGGCTTTTCA TGATGGATGCAAACG TERM 1616 1334095 - 1334075 - R 100 -12.6 -4.564 | opp_overlap 1334075, overlap 1334069 AAGCGTAAATGAAAA GCCAAGGG GGATT CCCTTGGC TTTTCATGATGGATG TERM 1617 1334075 - 1334095 + r 100 -13.3 -4.3129 | opp_overlap 1334075 1334069 AAGCGTAAATGAAAA GCCAAGGGG GAT TCCCTTGGC TTTTCATGATGGATG Shewmr7_1149 1337335 - 1334180 - | acriflavin resistance protein Shewmr7_1150 1338456 - 1337335 - | RND family efflux transporter MFP subunit TERM 1618 1338136 - 1338115 - G 76 -5.7 -4.68593 | opp_overlap 1338115, overlap 1338116 TTCATCATTTAAAAA GGCGTTGGC TTCG GCCACCGCA GCTTGGGCCTTCATG Shewmr7_1151 1339441 - 1338647 - | hypothetical protein TERM 1619 1339630 - 1339604 - R 100 -9.5 -4.74706 | gap 1, opp_overlap 1339604 1339600, overlap 1339627 CTCAAGATGTAAAAA GGGCCTATG-GG TAAA CCTCATAAGCCC TTCATTCTGTAGTGC TERM 1620 1339604 - 1339630 + r 73 -8.7 -3.51076 | opp_overlap 1339604 1339627, overlap 1339600 CTCAAGATGTAAAAA GGGCCTATGGG TAAAC CTCATAAGCCC TTCATTCTGTAGTGC Shewmr7_1152 1340855 - 1339689 - | metallophosphoesterase Shewmr7_1153 1341387 - 1345058 + | type IV pilin biogenesis protein, putative TERM 1621 1345307 - 1345285 - g 79 -7 -4.64676 | TTACCCGGAACAAAA TTGCCCCG TTTACCG CGGGACAA ACCCATTGCGCTCTA Shewmr7_1154 1345081 - 1345416 + | hypothetical protein TERM 1622 1345417 - 1345454 + T 100 -12.3 -3.97388 | opp_overlap 1345421, overlap 1345418 GAAAATCAAGGTTAA CCGATTATCTAAGTCTT TAAA AAGATTTAGATAATCGC TTTGTGCTCAGGTCT TERM 1623 1345418 - 1345453 + T 100 -15.8 -2.97951 | opp_overlap 1345421, overlap 1345417 AAAATCAAGGTTAAC CGATTATCTAAGTCTT TAAA AAGATTTAGATAATCG CTTTGTGCTCAGGTC TERM 1624 1345510 - 1345474 - T 73 -7.4 -4.11216 | gap 1, opp_overlap 1345473 1345477 1345479, overlap 1345476 1345477 1345479 TGCTCAGGTCTAAAA TATTACGCCTTAGGTAG TAAA CTTCCTAAGGCGTA-TG CTTTTAAACACCAAC TERM 1625 1345509 - 1345476 - T 100 -12.5 -3.65542 | opp_overlap 1345473 1345477 1345479, overlap 1345474 1345477 1345479 CTCAGGTCTAAAATA TTACGCCTTAGGTAG TAAA CTTCCTAAGGCGTAT GCTTTTAAACACCAA TERM 1626 1345477 - 1345508 + T 100 -16 -3.08032 | opp_overlap 1345477 1345476 1345474 1345479, overlap 1345473 1345479 TCAGGTCTAAAATAT TACGCCTTAGGTAG TAAA CTTCCTAAGGCGTA TGCTTTTAAACACCA TERM 1627 1345508 - 1345477 - T 100 -16 -2.79004 | opp_overlap 1345473 1345477 1345479, overlap 1345476 1345474 1345479 TCAGGTCTAAAATAT TACGCCTTAGGTAG TAAA CTTCCTAAGGCGTA TGCTTTTAAACACCA TERM 1628 1345479 - 1345506 + T 100 -14.2 -3.09823 | opp_overlap 1345479 1345477 1345476 1345474, overlap 1345477 1345473 AGGTCTAAAATATTA CGCCTTAGGTAG TAAA CTTCCTAAGGCG TATGCTTTTAAACAC TERM 1629 1345506 - 1345479 - T 100 -14.2 -2.93891 | opp_overlap 1345477 1345473 1345479, overlap 1345477 1345476 1345474 AGGTCTAAAATATTA CGCCTTAGGTAG TAAA CTTCCTAAGGCG TATGCTTTTAAACAC Shewmr7_1155 1346198 - 1345545 - | putative protein-disulfide isomerase TERM 1630 1346292 - 1346271 - R 80 -11.5 -2.68786 | opp_overlap 1346269 1346267 1346266, overlap 1346270 TACATCAGAATGAAT GGGGCAGGG AATA CCGTGCCCC GATGCGTTTACATGG Shewmr7_1156 1347199 - 1346300 - | beta-lactamase domain-containing protein TERM 1631 1348115 - 1348103 - g 70 -9.1 -3.53343 | overlap 1348090 AATGGTGGTGTTAAA CGCCA CCT TGGCG GGGGAGGGAATTGCC Shewmr7_1157 1347387 - 1348310 + | LysR family transcriptional regulator TERM 1632 1349504 - 1349494 - g 74 -2.4 -5.06816 | ACGGGGCAAGAAAAA CCGG CGA CCGT GCGCGTGCGTTACTT Shewmr7_1158 1348570 - 1349577 + | hypothetical protein TERM 1633 1349630 - 1349603 - T 100 -14.2 -4.36914 | opp_overlap 1349608, overlap 1349608 CTTTTGTGCATAAAA GAAAAGCCCCGC AATT GCGGGGCTTTTT ATGTACCTATAAACG TERM 1634 1349625 - 1349608 - T 100 -14.1 -5.18371 | opp_overlap 1349608, overlap 1349603 GTGCATAAAAGAAAA GCCCCGC AATT GCGGGGC TTTTTATGTACCTAT TERM 1635 1349608 - 1349625 + T 100 -14.1 -4.99638 | opp_overlap 1349608 1349603 GTGCATAAAAGAAAA GCCCCGC AATT GCGGGGC TTTTTATGTACCTAT Shewmr7_1159 1351321 - 1349654 - | putative ABC transporter ATP-binding protein TERM 1636 1350546 - 1350568 + g 86 -8.4 -4.72272 | overlap 1350537 GCGCTTTCTGCGGCA GATTCCTGCT TCA AGCGGGCATC TTTTTGCTCAAGCCA TERM 1637 1350995 - 1351015 + g 74 -9.7 -3.5771 | GGGATCCGCGTAAGC CGCATAGAC TTC GTCTAAGCG TTTGAGGGCATTTTT TERM 1638 1351535 - 1351524 - g 73 -3 -5.055 | GCAATGCTGAAAAAA GATA TGAA TATC GCAGATTATGATCCG TERM 1639 1352275 - 1352264 - g 70 -2.2 -4.99638 | AGAGCTATACAAAAA GCTA AACT CAGC GGTATTCCCAGGCGG glyA 1351512 - 1352765 + | serine hydroxymethyltransferase TERM 1640 1352863 - 1352881 + F 100 -11.7 -5.1356 | opp_overlap 1352860 1352859 TAGGATAAAATCCCA TGGCCGC ATTAA GCGGCCA TTTTTATTGCTAAAA Shewmr7_1161 1352962 - 1353411 + | transcriptional regulator NrdR TERM 1641 1353671 - 1353651 - g 74 -4.5 -4.77036 | overlap 1353652 1353653 GGTTATCATCAAAAA GCCGGCGAG CCC CACGCCGAG GTGCATGCACTGCGC Shewmr7_1162 1353504 - 1354649 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase Shewmr7_1163 1354657 - 1355313 + | riboflavin synthase subunit alpha Shewmr7_1164 1355381 - 1356484 + | GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1642 1356638 - 1356626 - g 76 -6.3 -4.69656 | AATTAGGTAAGAAAA TGAAC GTA GTTCA AGGTAATATCGAAGC Shewmr7_1165 1356625 - 1357101 + | 6,7-dimethyl-8-ribityllumazine synthase nusB 1357116 - 1357520 + | transcription antitermination protein NusB TERM 1643 1357554 - 1357525 - f 89 -12.3 -2.89081 | opp_overlap 1357531, overlap 1357531 CACGTAAGTAATAAG GACAAACGGTATC TTAG GATACCGTTTTTC ATTGCTAACAAAGGT TERM 1644 1357531 - 1357548 + F 100 -9.9 -4.90266 | opp_overlap 1357525 1357531 AGTAATAAGGACAAA CGGTATC TTAG GATACCG TTTTTCATTGCTAAC TERM 1645 1357548 - 1357531 - f 88 -9.9 -4.14859 | opp_overlap 1357531, overlap 1357525 AGTAATAAGGACAAA CGGTATC TTAG GATACCG TTTTTCATTGCTAAC Shewmr7_1167 1357599 - 1358555 + | thiamine-monophosphate kinase TERM 1646 1358576 - 1358593 + G 79 -12.7 -3.07895 | opp_overlap 1358575 1358578, overlap 1358578 TTGTTATCCCAAGAT CAGGCGC TGTC GCGCCTG TCTCTTAAAAATCCG TERM 1647 1358678 - 1358690 + G 75 -10.5 -3.49065 | overlap 1358635 1358675 ACTTTTGGCACCTTG GCGGC TGT GCCGC TCTATTTGTTATTGG Shewmr7_1168 1358555 - 1359049 + | phosphatidylglycerophosphatase TERM 1648 1359076 - 1359101 + T 100 -14.9 -5.27335 | TACAGTGTTATCCGA CAGCCTTTAGT GAAA ACTAAAGGCTG TTTTTATTTGCGCGA Shewmr7_1169 1360003 - 1359128 - | UspA domain-containing protein TERM 1649 1360359 - 1360331 - R 100 -16.3 -2.53876 | opp_overlap 1360331 1360335 1360338, overlap 1360335 1360338 TTCCATCCTAAGTCA TAAATAAGGCTCT GCT AGAGCCTTATTTA TGTGTAAGCCTGAAT TERM 1650 1360331 - 1360359 + r 100 -16.3 -2.88663 | opp_overlap 1360331 1360335 1360338, overlap 1360335 1360338 TTCCATCCTAAGTCA TAAATAAGGCTCT GCT AGAGCCTTATTTA TGTGTAAGCCTGAAT TERM 1651 1360355 - 1360335 - R 100 -12.7 -3.97636 | opp_overlap 1360331 1360335 1360338, overlap 1360331 1360338 ATCCTAAGTCATAAA TAAGGCTCT GCT AGAGCCTTA TTTATGTGTAAGCCT TERM 1652 1360335 - 1360355 + r 100 -12.7 -4.128 | opp_overlap 1360335 1360331 1360338, overlap 1360331 1360338 ATCCTAAGTCATAAA TAAGGCTCT GCT AGAGCCTTA TTTATGTGTAAGCCT TERM 1653 1360338 - 1360352 + r 88 -10 -4.18674 | opp_overlap 1360335 1360331 1360338, overlap 1360335 1360331 CTAAGTCATAAATAA GGCTCT GCT AGAGCC TTATTTATGTGTAAG TERM 1654 1360352 - 1360338 - R 88 -10 -4.11304 | opp_overlap 1360338 1360335 1360331, overlap 1360335 1360331 CTAAGTCATAAATAA GGCTCT GCT AGAGCC TTATTTATGTGTAAG Shewmr7_1170 1362052 - 1360394 - | recombination and repair protein Shewmr7_1171 1363144 - 1362182 - | auxin efflux carrier Shewmr7_1172 1363419 - 1364318 + | LysR family transcriptional regulator Shewmr7_1173 1364557 - 1364324 - | hypothetical protein Shewmr7_1174 1365253 - 1364654 - | hypothetical protein Shewmr7_1175 1368035 - 1365228 - | hybrid sensory histidine kinase BarA TERM 1655 1365491 - 1365511 + gH 100 -12.6 -3.53091 | CATCTTGGCTCAGCG CCGTCTCG ATGGC CGAGACGG TTTGAGGCAGCGAAT TERM 1656 1365546 - 1365534 - GH 70 -7.7 -3.73783 | CAGCGAATCCAATAA CATGC GCA GCATG TCTAAGGCTAAATCT TERM 1657 1367138 - 1367159 + gH 100 -8.7 -5.09895 | gap 1, opp_overlap 1367138, overlap 1367139 AGAACTCCGACTTAA TGCG-GCTGG CCT CCAGCGCGCG TTTTTTGGCTAAGTC TERM 1658 1367139 - 1367158 + gH 80 -10 -3.65214 | gap 1, opp_overlap 1367138, overlap 1367138 GAACTCCGACTTAAT GCG-GCTGG CCT CCAGCGCGC GTTTTTTGGCTAAGT TERM 1659 1367487 - 1367472 - GH 71 -6 -4.39277 | opp_overlap 1367474 1367478, overlap 1367474 CAAGACGATAATAAA GGCGGC CACG GCGGCC CTGTGCTGTTCGAGC rumA 1368095 - 1369486 + | 23S rRNA 5-methyluridine methyltransferase Shewmr7_1177 1369676 - 1371883 + | (p)ppGpp synthetase I, SpoT/RelA TERM 1660 1372023 - 1372050 + T 100 -14.8 -2.62616 | TCCGTCCTTGGATGC TCGACCGCCCCA TCCG TGGGGCGGACGG TCGTCTCGCAAATCA TERM 1661 1372117 - 1372148 + T 76 -8.1 -4.08692 | opp_overlap 1372115 1372113 1372117, overlap 1372095 GGTTTCAAAGAGACA CACAGCATGCTTT GGGACA AAAGCGTGCTATG TTTTGCGCAAAATTA Shewmr7_1178 1373249 - 1372215 - | hypothetical protein TERM 1662 1373208 - 1373170 - G 100 -9.7 -5.39721 | gap 1 TCACCACACAAAAAA GCCCTTCTAACACAGCGA TTTA TCAC-ATGATAGAAGGGC GTTGCATTAGCATCA Shewmr7_1179 1373943 - 1373677 - | hypothetical protein Shewmr7_1180 1381261 - 1373948 - | YD repeat-containing protein TERM 1663 1375347 - 1375328 - G 76 -8.6 -4.12532 | gap 1 GCTGCCATAGACAAA GCTCGTGGT GGC ACCACG-GC CAGAGACGCTCAGTG TERM 1664 1376169 - 1376181 + g 74 -6.9 -4.30576 | GTACCTGGCGCACTG CCGCC CGT GGTGG TTTTACTGGTAACGC TERM 1665 1378822 - 1378803 - G 78 -5.7 -4.86862 | opp_overlap 1378812 TGGAAAAAATGAAAA CCATCCC CAGTAT GGAATGG ATAAGTTGGAGCACT TERM 1666 1379818 - 1379801 - G 70 -2.7 -4.77567 | overlap 1379802 AGGCTGATAATAAAA TGTGATA TTCC TATCACC TAATGCGCCCAAACT Shewmr7_1181 1382075 - 1381479 - | phage integrase family protein Shewmr7_1182 1382766 - 1382341 - | GCN5-related N-acetyltransferase TERM 1667 1382442 - 1382420 - G 88 -10.8 -4.19238 | opp_overlap 1382417 1382413 1382420 CCTGCAAGTTCAAAA CCTATTTTTT GAT AAAAAATAGG TGCTTGAATTGATAA Shewmr7_1183 1383385 - 1382843 - | hypothetical protein TERM 1668 1383287 - 1383308 + g 72 -3.7 -4.77896 | overlap 1383288 ATTGAGCATTTCAAG GTGTGAAGG AAAC CTTTCACAA TTTTTAAATTGATTA mazG 1384031 - 1384969 + | nucleoside triphosphate pyrophosphohydrolase Shewmr7_1185 1385086 - 1386726 + | CTP synthetase TERM 1669 1386765 - 1386730 - f 76 -11 -2.63182 | opp_overlap 1386734, overlap 1386729 1386728 CTGAAGAAATAAATT TTAAGGCCGGACCCGC GACA GTGGGCCCGGCCTTTT GTTACACTCAGGCCG TERM 1670 1386734 - 1386761 + F 100 -16.2 -4.65916 | opp_overlap 1386730 1386729 1386728 AGAAATAAATTTTAA GGCCGGACCCGC GACA GTGGGCCCGGCC TTTTGTTACACTCAG TERM 1671 1387483 - 1387473 - g 71 -5.4 -4.56597 | opp_overlap 1387473 TGTTGGCGCGAAAAA CTTC CGC GAAG CTTTACGTATGGGCG Shewmr7_1186 1386940 - 1388235 + | enolase TERM 1672 1388274 - 1388257 - f 100 -12.7 -4.65895 | opp_overlap 1388257 CGTCTGATGTAAAAA GGCCACC ACTT GGTGGCC TTTTTTGTTGTACTA TERM 1673 1388257 - 1388274 + F 100 -12.7 -5.58179 | opp_overlap 1388257 CGTCTGATGTAAAAA GGCCACC ACTT GGTGGCC TTTTTTGTTGTACTA Shewmr7_1187 1388336 - 1388635 + | cell division protein FtsB Shewmr7_1188 1388646 - 1389395 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Shewmr7_1189 1389447 - 1389926 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Shewmr7_1190 1389956 - 1391083 + | pseudouridylate synthase Shewmr7_1191 1391080 - 1391829 + | 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase Shewmr7_1192 1391826 - 1392461 + | protein-L-isoaspartate O-methyltransferase Shewmr7_1193 1392559 - 1393455 + | peptidase M23B Shewmr7_1194 1393536 - 1394516 + | RNA polymerase, sigma 28 subunit TERM 1674 1394567 - 1394603 + T 75 -10.4 -2.84528 | gap 1, opp_overlap 1394566 1394576, overlap 1394566 1394576 ACCCGTTCAACAAGT CATAAAAA-ACGCCCAA TACT TAGGGCGTTTTTTTATG CTTTCGCGTTTATGT TERM 1675 1394576 - 1394593 + T 100 -6.9 -5.75599 | opp_overlap 1394566 1394576, overlap 1394567 1394566 ACAAGTCATAAAAAA CGCCCAA TACT TAGGGCG TTTTTTTATGCTTTC TERM 1676 1394593 - 1394576 - T 89 -6.9 -5.3236 | opp_overlap 1394576 1394567 1394566, overlap 1394566 ACAAGTCATAAAAAA CGCCCAA TACT TAGGGCG TTTTTTTATGCTTTC Shewmr7_1195 1397228 - 1394643 - | DNA mismatch repair protein TERM 1677 1395345 - 1395332 - G 70 -9.5 -3.31792 | CCATTAGGGTGATAA GCGCC ACTT GGCGC ATGTAGGTCGATTTA TERM 1678 1397184 - 1397195 + g 70 -3 -4.88736 | CAAATATTGACGCAT CATA GGGG TATG TTTTTCTAAATCATC recA 1397611 - 1398684 + | recombinase A TERM 1679 1398702 - 1398731 + F 79 -10.7 -3.01712 | gap 1, opp_overlap 1398703 CAGTCAGCCCGTCAA ATCGCGGTCGTGCT GTT AGCGCG-CCGCGAC TATTCCCGCCAAGAA TERM 1680 1398730 - 1398703 - f 91 -12 -3.54543 | gap 1, opp_overlap 1398702 AGTCAGCCCGTCAAA TCGCGGTCGTGCT GTT AGCGCG-CCGCGA CTATTCCCGCCAAGA Shewmr7_1197 1398711 - 1399169 + | regulatory protein RecX TERM 1681 1401369 - 1401356 - g 82 -3.7 -5.33026 | opp_overlap 1401356 1401357, overlap 1401357 GAAGCCAAAGAAAAA GGCGC TATG GCGCT CTTTGGTGAGAAGTA Shewmr7_1198 1399445 - 1402069 + | alanyl-tRNA synthetase TERM 1682 1402134 - 1402169 + G 74 -11.2 -3.14881 | overlap 1402137 TGAAGAAGTTTGGCG GCACTTCGGTGGGTTC GATT GAACGCATCGAAGTGG TTGCTGAGCAAATTG TERM 1683 1402137 - 1402166 + G 71 -11.5 -2.77899 | overlap 1402134 AGAAGTTTGGCGGCA CTTCGGTGGGTTC GATT GAACGCATCGAAG TGGTTGCTGAGCAAA TERM 1684 1402270 - 1402310 + G 83 -14.8 -2.62184 | gap 1, opp_overlap 1402256 1402253 1402275, overlap 1402275 ATTTGCCCTTGCGGC GCAAATCGA-TCCCCGCGC GAGT GCGCGGGAACTCGATATGC TGGTATCGACAGGAG TERM 1685 1402275 - 1402305 + G 74 -11.9 -2.84634 | gap 1, opp_overlap 1402253 1402275, overlap 1402270 CCCTTGCGGCGCAAA TCGA-TCCCCGCGC GAGT GCGCGGGAACTCGA TATGCTGGTATCGAC TERM 1686 1402305 - 1402275 - g 89 -14.1 -3.53012 | gap 1, opp_overlap 1402275 1402270, overlap 1402253 CCCTTGCGGCGCAAA TCGA-TCCCCGCGC GAGT GCGCGGGAACTCGA TATGCTGGTATCGAC Shewmr7_1199 1402079 - 1403335 + | aspartate kinase Shewmr7_1200 1403454 - 1403651 + | carbon storage regulator, CsrA / carbon storage regulator, CsrA TERM 1687 1403680 - 1403711 + T 100 -10.4 -5.00616 | opp_overlap 1403687, overlap 1403687 CGAGTATTAGCGACA TAAAAGAGTCAGTT TTTT AACTGGCTTTTTTA TTTTTTGAACCGAAA TERM 1688 1403687 - 1403704 + T 100 -6.3 -6.04324 | opp_overlap 1403687, overlap 1403680 TAGCGACATAAAAGA GTCAGTT TTTT AACTGGC TTTTTTATTTTTTGA TERM 1689 1404872 - 1404893 + T 100 -14.5 -5.16237 | opp_overlap 1404872 GTTAGATTTAGATAA GCCCTGCAA GTAA TTGCAGGGC TTTTTTAATGGAATT TERM 1690 1404893 - 1404872 - T 100 -14.5 -3.53722 | opp_overlap 1404872 GTTAGATTTAGATAA GCCCTGCAA GTAA TTGCAGGGC TTTTTTAATGGAATT TERM 1691 1405239 - 1405221 - T 100 -13.2 -5.27335 | opp_overlap 1405221 CTGGGGAAATAAAAA GGGCTGTA AAA TACAGCCC TTTTTAGCGTAGATG TERM 1692 1405221 - 1405239 + T 100 -13.2 -4.62783 | opp_overlap 1405221 CTGGGGAAATAAAAA GGGCTGTA AAA TACAGCCC TTTTTAGCGTAGATG valS 1408137 - 1405261 - | valyl-tRNA synthetase TERM 1693 1407537 - 1407559 + g 80 -2.7 -5.26247 | gap 1, opp_overlap 1407537, overlap 1407543 CGGCTAATGGATAAC GTAGGTGCCA CATG TGGC-CTTGC TTTTCTTTGTTTTCC Shewmr7_1202 1408617 - 1408153 - | DNA polymerase III chi subunit, HolC TERM 1694 1408222 - 1408245 + g 74 -7.4 -4.24745 | TAAGCCACGATATTG GCGGTAGCGT TCAC GTGCTATCGC TTTATGTTGGTCGTC TERM 1695 1408829 - 1408846 + r 88 -12.7 -2.71364 | opp_overlap 1408824 1408829 AGATATAAAAGCAAA GCGCACC CGAA GGTGCGC TGATTGAAAGACTGG TERM 1696 1408846 - 1408829 - R 100 -12.7 -4.31065 | opp_overlap 1408829, overlap 1408824 AGATATAAAAGCAAA GCGCACC CGAA GGTGCGC TGATTGAAAGACTGG TERM 1697 1409063 - 1409052 - R 71 -2.2 -5.20333 | CATTCAGAATAAAAA CAAC GGAA GCTG GCTAATGATAGTACT Shewmr7_1203 1410129 - 1409773 - | sigma 54 modulation protein / SSU ribosomal protein S30P Shewmr7_1204 1410427 - 1411116 + | cytochrome B561 TERM 1698 1411162 - 1411130 - T 86 -12.2 -3.04501 | opp_overlap 1411131 1411138, overlap 1411138 AGCAAGTGCTGAACA TTAAAAAAGCCTGC ATGTA GCAGGCTTTTTTAT TTAGACATTACGAAG TERM 1699 1411131 - 1411161 + T 100 -15.7 -3.60792 | opp_overlap 1411130 1411138, overlap 1411138 GCAAGTGCTGAACAT TAAAAAAGCCTGC ATGTA GCAGGCTTTTTTA TTTAGACATTACGAA TERM 1700 1411138 - 1411154 + T 100 -9.4 -5.63517 | opp_overlap 1411130 1411138, overlap 1411131 CTGAACATTAAAAAA GCCTGC ATGTA GCAGGC TTTTTTATTTAGACA TERM 1701 1411154 - 1411138 - T 100 -9.4 -5.27779 | opp_overlap 1411138 1411131, overlap 1411130 CTGAACATTAAAAAA GCCTGC ATGTA GCAGGC TTTTTTATTTAGACA Shewmr7_1205 1411633 - 1411184 - | cytochrome c, class II TERM 1702 1411280 - 1411298 + g 100 -9.6 -4.64334 | ACCTTTTTGAGCCAC TGTCGCTA AAA TAGCGGCA TTTTCTTGGAAGGTT Shewmr7_1206 1411823 - 1412098 + | Trp operon repressor Shewmr7_1207 1412506 - 1412129 - | hypothetical protein TERM 1703 1412624 - 1412655 + r 75 -8.8 -3.71552 | opp_overlap 1412628, overlap 1412628 ACATTTGTTGATAAA AAAAGCACTTCCTT ATGT AAGGAAGTGCTTCA TTATCTTGCTCGGGT TERM 1704 1412651 - 1412628 - R 100 -14 -5.60993 | opp_overlap 1412624 1412628 TTGTTGATAAAAAAA GCACTTCCTT ATGT AAGGAAGTGC TTCATTATCTTGCTC TERM 1705 1412628 - 1412651 + r 100 -14 -3.55453 | opp_overlap 1412628, overlap 1412624 TTGTTGATAAAAAAA GCACTTCCTT ATGT AAGGAAGTGC TTCATTATCTTGCTC Shewmr7_1208 1413373 - 1412699 - | peptidylprolyl isomerase, FKBP-type TERM 1706 1413243 - 1413254 + g 71 -5.8 -4.37886 | AATGCAGCTTCTAAT CCTG GGAT CAGG TTTTCTGCACCGTGC TERM 1707 1413939 - 1413963 + H 100 -12.9 -5.72622 | opp_overlap 1413936, overlap 1413951 GAATTTTAACGACGA GCCCGCTTC CCACAAA GAAGCGGGC TTTTTTGTTTCTAGC thrA 1414016 - 1416484 + | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 1708 1416770 - 1416756 - g 84 -2.1 -5.63504 | gap 1, opp_overlap 1416757, overlap 1416757 1416758 AACCCTAGAAAAAAA CTTGCC CGTC GGCA-G TGGCTTAGGCTCGAG Shewmr7_1210 1416481 - 1417419 + | homoserine kinase TERM 1709 1417660 - 1417650 - g 74 -2.4 -5.15634 | opp_overlap 1417650 GAGCGCAGTAAAAAA GTGC TCG GCGC TTGGCTCGCCTCAGA TERM 1710 1417756 - 1417770 + G 79 -7.1 -4.72272 | CGGTCGATGAGCAGC GCTCG TGCCT CGAGC TTTTTCATGGGCCAA TERM 1711 1417892 - 1417910 + G 74 -8 -4.09864 | CTCGGGTGACACTGG GGCGGCGG TGG CCGATGCC TTTTACGGCCTAGAT TERM 1712 1418009 - 1417982 - g 71 -6.4 -4.3586 | gap 1, overlap 1418006 1418008 TGAGCTACAGGAAAA GATGTTCACCACC TTA GGTAA-GAACATC CACACTGTGGCAGTA TERM 1713 1418403 - 1418421 + G 77 -10.2 -3.53444 | opp_overlap 1418403 1418402 1418398 AGCGAGCCAAGTAAC TGGCCGCG CGT CGAGGCCA TTTGCGAGAAACTCG Shewmr7_1211 1417485 - 1418768 + | threonine synthase TERM 1714 1418817 - 1418800 - f 89 -11.3 -3.481 | opp_overlap 1418800, overlap 1418794 TAAGCGAAATATCAA GGGAGTC AATT GACTCCC TTTTTTACAAGTGTA TERM 1715 1418800 - 1418817 + F 100 -11.3 -5.04385 | opp_overlap 1418800 1418794 TAAGCGAAATATCAA GGGAGTC AATT GACTCCC TTTTTTACAAGTGTA Shewmr7_1212 1419034 - 1419327 + | hypothetical protein Shewmr7_1213 1419497 - 1420375 + | extracellular solute-binding protein Shewmr7_1214 1420583 - 1423864 + | peptidase S41 TERM 1716 1423869 - 1423856 - T 73 -5.3 -4.71223 | GCAGAAGACATAAAA GCTAA GTAA TTAGC TTAAAAAATAGAAAT TERM 1717 1423935 - 1423965 + T 100 -14.8 -5.60993 | TTGGTTCAATGTTAG GGTGTTGTCTTGTG GTT CCCGAGACAACACC TTTTTTTATGCCCAC Shewmr7_1215 1424393 - 1423971 - | hypothetical protein Shewmr7_1216 1424960 - 1424523 - | OsmC family protein Shewmr7_1217 1425410 - 1425060 - | hypothetical protein Shewmr7_1218 1427089 - 1425407 - | PepSY-associated TM helix domain-containing protein Shewmr7_1219 1427459 - 1427091 - | hypothetical protein Shewmr7_1220 1427883 - 1429451 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Shewmr7_1221 1429681 - 1430037 + | SSU ribosomal protein S30P / sigma 54 modulation protein TERM 1718 1430055 - 1430091 + T 100 -16.2 -2.8805 | gap 1, opp_overlap 1430059 1430066, overlap 1430059 1430066 TATTACCTTAACGAT GC-AATAAAAAAGGGCC AACT GGCCCTTTTTTATTGGC TGTGTGACACGTCCT TERM 1719 1430059 - 1430086 + T 100 -15.8 -3.15999 | opp_overlap 1430059 1430066, overlap 1430055 1430066 ACCTTAACGATGCAA TAAAAAAGGGCC AACT GGCCCTTTTTTA TTGGCTGTGTGACAC TERM 1720 1430086 - 1430059 - T 100 -15.8 -3.13343 | opp_overlap 1430059 1430055 1430066, overlap 1430066 ACCTTAACGATGCAA TAAAAAAGGGCC AACT GGCCCTTTTTTA TTGGCTGTGTGACAC TERM 1721 1430066 - 1430079 + T 100 -9.5 -5.49234 | opp_overlap 1430059 1430066, overlap 1430059 1430055 CGATGCAATAAAAAA GGGCC AACT GGCCC TTTTTTATTGGCTGT TERM 1722 1430079 - 1430066 - T 100 -9.5 -5.4833 | opp_overlap 1430066 1430059 1430055, overlap 1430059 CGATGCAATAAAAAA GGGCC AACT GGCCC TTTTTTATTGGCTGT Shewmr7_1222 1430855 - 1430178 - | two component LuxR family transcriptional regulator Shewmr7_1223 1432060 - 1430900 - | putative signal transduction histidine kinase TERM 1723 1432330 - 1432355 + H 100 -16.2 -5.19916 | opp_overlap 1432322 1432333 AAAAAATCGATTACT CAACCCCGCC CAAAGT GGCGGGGTTG TTTTTTCCGTCTTTT TERM 1724 1432352 - 1432333 - H 86 -12.1 -3.10908 | opp_overlap 1432330, overlap 1432322 AAATCGATTACTCAA CCCCGCC CAAAGT GGCGGGG TTGTTTTTTCCGTCT Shewmr7_1224 1432394 - 1432939 + | isochorismatase hydrolase TERM 1725 1432979 - 1432950 - T 100 -13.7 -3.87815 | opp_overlap 1432956, overlap 1432956 GTTGATGTCCACAAA CAAAAACGCAGCC CTTA GGCTGCGTTTTTT GATATCAGAATACAC TERM 1726 1432956 - 1432973 + T 100 -12.7 -5.21709 | opp_overlap 1432950 1432956 GTCCACAAACAAAAA CGCAGCC CTTA GGCTGCG TTTTTTGATATCAGA TERM 1727 1432973 - 1432956 - T 100 -12.7 -5.38054 | opp_overlap 1432956, overlap 1432950 GTCCACAAACAAAAA CGCAGCC CTTA GGCTGCG TTTTTTGATATCAGA Shewmr7_1225 1433717 - 1432995 - | hypothetical protein TERM 1728 1433087 - 1433101 + g 71 -11.4 -2.83964 | overlap 1433085 ATGTCGCGATATCTT CGCCTG ACA CAGGCG TCATGTTCTGTGGTA TERM 1729 1433386 - 1433405 + g 71 -5.8 -4.32482 | gap 1 TTCACGAAGGCTTGA CGTAC-TTC GGT GAAGGTACG TTTTACGTTGTCGGT Shewmr7_1226 1434106 - 1435677 + | methyl-accepting chemotaxis sensory transducer Shewmr7_1227 1435992 - 1436216 + | hypothetical protein TERM 1730 1436257 - 1436280 + T 100 -10.4 -4.61873 | opp_overlap 1436257 1436251 CATATGAAACTTAAA GGACGATAAG TAGA TTTATCGTCC TTTTGCTTTATAGGG TERM 1731 1436280 - 1436257 - T 84 -9.7 -3.8822 | opp_overlap 1436257, overlap 1436251 CATATGAAACTTAAA GGACGATAA GTAGAT TTATCGTCC TTTTGCTTTATAGGG Shewmr7_1228 1436905 - 1436324 - | TetR family transcriptional regulator TERM 1732 1436992 - 1436951 - H 83 -11.9 -2.61274 | opp_overlap 1436950 1436961, overlap 1436950 1436961 GTGATTCTAACTAAT TTTGAACAAACATTCAAAA ATGT TCTTGAATGATCGTTCAAA TAATAATATCTTGAA TERM 1733 1436982 - 1436961 - H 71 -6.7 -4.183 | opp_overlap 1436950 1436961, overlap 1436951 1436950 CTAATTTTGAACAAA CATTCAAAA ATGT TCTTGAATG ATCGTTCAAATAATA TERM 1734 1437020 - 1437001 - H 70 -8 -3.63464 | overlap 1436999 GTTCAAATAATAATA TCTTGAAT GCAT ATTCAAGA ATGGGGTGACACCAA Shewmr7_1229 1437035 - 1438102 + | NADH:flavin oxidoreductase/NADH oxidase TERM 1735 1438130 - 1438148 + T 100 -13.2 -5.1166 | opp_overlap 1438130 ATTGCCGATAAAAAA GGGTTAGC TTA GCTAACCC TTTTTGCTTTTGGTC TERM 1736 1438148 - 1438130 - T 100 -13.2 -5.24531 | opp_overlap 1438130 ATTGCCGATAAAAAA GGGTTAGC TTA GCTAACCC TTTTTGCTTTTGGTC Shewmr7_1230 1440587 - 1438170 - | peptidase S16, lon domain-containing protein TERM 1737 1441567 - 1441551 - g 77 -8.7 -4.04209 | overlap 1441544 1441553 CTAAAGCAGCATAAA TACGCCT TGG AGGCGCA GCGCGGGCAAGTCTA TERM 1738 1441565 - 1441553 - g 70 -9.1 -3.60538 | overlap 1441544 1441551 AAAGCAGCATAAATA CGCCT TGG AGGCG CAGCGCGGGCAAGTC TERM 1739 1442327 - 1442313 - g 71 -5.6 -4.56775 | overlap 1442315 ATTTCCGCTCAAAAA CAGAGC GAG GCTCAG CTAGCCCATTTAGCT Shewmr7_1231 1440987 - 1443623 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Shewmr7_1232 1443752 - 1444981 + | DEAD/DEAH box helicase domain-containing protein TERM 1740 1445056 - 1445077 + T 100 -15.9 -5.38054 | TGACTTGGATACTTA TCCGCCCCA GAGA TGGGGCGGA TTTTTGTTTATGAGC Shewmr7_1233 1445760 - 1445251 - | hypothetical protein Shewmr7_1234 1445962 - 1446915 + | hypothetical protein TERM 1741 1447613 - 1447603 - g 74 -2.4 -5.09426 | TCCAAGGGCAAAAAA CGGC CGA GCAG CACGCGAGTCATTCG Shewmr7_1235 1446990 - 1448090 + | MerR family transcriptional regulator TERM 1742 1448365 - 1448375 + G 70 -2.4 -5.03145 | opp_overlap 1448365, overlap 1448371 CTCGATAGCTTTAAA GAGG TGC CCGC TTTTTTAGCGAGTTA TERM 1743 1448812 - 1448794 - g 71 -7.4 -4.06384 | opp_overlap 1448796 1448810 GCCCAAGACTATAAA CAGGATAG GGA CTTTCCTG CTCTCGAGGGGACCA TERM 1744 1449102 - 1449092 - g 76 -8.2 -4.13767 | opp_overlap 1449091 1449092 GGTGCGAGGGCAAAA CGGG TTA CCCG ATTGTAGATGCGGCG Shewmr7_1236 1448083 - 1449564 + | deoxyribodipyrimidine photo-lyase type I TERM 1745 1449982 - 1450008 + G 76 -11.7 -2.88249 | overlap 1450003 GATTATTTCGACTTA GGGCAAATGTT GTATG AGCATTTGCCC TGTATGGGCGGTCTC Shewmr7_1237 1449610 - 1450056 + | transcriptional regulator-related protein TERM 1746 1450095 - 1450081 - g 71 -5 -4.45083 | overlap 1450085 1450087 TGCAGATCCACAAAA TCAACA CTG TGCTGA TCACAGGTGCAAGCT TERM 1747 1450183 - 1450139 - g 74 -12.4 -2.77235 | gap 1, overlap 1450136 GCAATTAGCCAAGGA TTATCTCG-CCGCAGGC TGGCATGTGATT GCCTGCGGGCGAGATAA AGCCAAGCTCGATGC TERM 1748 1450727 - 1450702 - g 73 -10.3 -3.27525 | overlap 1450697 CGGCGTCAAAGGCAA TTCGCCGCGGG CTCT CGCGCGGCGTA ACCGAGATCCATTTC Shewmr7_1238 1450056 - 1450856 + | short-chain dehydrogenase/reductase SDR Shewmr7_1239 1450853 - 1452103 + | amine oxidase Shewmr7_1240 1452100 - 1452891 + | hypothetical protein Shewmr7_1241 1452893 - 1454149 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 1749 1454201 - 1454231 + G 71 -6.2 -4.29981 | opp_overlap 1454200 1454202, overlap 1454193 1454202 1454206 TAAATATCTCAAAAC ATCAGGGCTTTATA TTC TATAACGCCTTGAG TTTTCAGTGTGTTTG TERM 1750 1454253 - 1454280 + G 77 -10 -3.7347 | overlap 1454255 GTGTGTTTGGTGGAC TAGCGTACTATT TGGC AATAGTGCGCTG TTATTGAGTATTCCG TERM 1751 1454255 - 1454278 + G 75 -10.4 -3.44517 | overlap 1454253 GTGTTTGGTGGACTA GCGTACTATT TGGC AATAGTGCGC TGTTATTGAGTATTC Shewmr7_1242 1454161 - 1454706 + | hypothetical protein TERM 1752 1455173 - 1455192 + G 73 -5.8 -4.4521 | gap 1, opp_overlap 1455173 TAAGTTTCAAACTCA TTGA-TGCG CAG CGCAGTCAA TTCTTTTTCAATGGT Shewmr7_1243 1454761 - 1455333 + | hypothetical protein Shewmr7_1244 1455321 - 1455869 + | hypothetical protein Shewmr7_1245 1455934 - 1456155 + | hypothetical protein Shewmr7_1246 1456590 - 1456246 - | hypothetical protein TERM 1753 1456761 - 1456771 + G 74 -6.8 -4.30719 | TACCTATCGAATGCT GACC GTT GGTC TTTATTGTGCAAAAA Shewmr7_1247 1456743 - 1456928 + | hypothetical protein TERM 1754 1456969 - 1456953 - f 84 -6.5 -5.06016 | opp_overlap 1456953 1456954 1456962, overlap 1456954 ATGACAGAAACAAAA CCCACTC ATC GAGTGGC TTCGTTGTTTTTAAT TERM 1755 1456968 - 1456954 - f 80 -10 -3.61983 | opp_overlap 1456954 1456953 1456962, overlap 1456953 TGACAGAAACAAAAC CCACTC ATC GAGTGG CTTCGTTGTTTTTAA TERM 1756 1456954 - 1456968 + F 72 -10 -2.83836 | opp_overlap 1456953 1456954, overlap 1456953 1456962 TGACAGAAACAAAAC CCACTC ATC GAGTGG CTTCGTTGTTTTTAA TERM 1757 1457135 - 1457097 - f 100 -14.8 -3.40622 | opp_overlap 1457108, overlap 1457099 1457108 CAGGTTCAAAATACA GATACAAAAAAGCCACTC AGT GAGTGGCTTTTTTGTTTT TTATGGTGCCGGCAC TERM 1758 1457133 - 1457099 - f 100 -17.4 -3.26779 | opp_overlap 1457108, overlap 1457097 1457108 GGTTCAAAATACAGA TACAAAAAAGCCACTC AGT GAGTGGCTTTTTTGTT TTTTATGGTGCCGGC TERM 1759 1457108 - 1457124 + F 100 -12.3 -6.07374 | opp_overlap 1457099 1457097 1457108 TACAGATACAAAAAA GCCACTC AGT GAGTGGC TTTTTTGTTTTTTAT TERM 1760 1457124 - 1457108 - f 100 -12.3 -5.4492 | opp_overlap 1457108, overlap 1457099 1457097 TACAGATACAAAAAA GCCACTC AGT GAGTGGC TTTTTTGTTTTTTAT TERM 1761 1457755 - 1457707 - f 100 -12.7 -3.68619 | opp_overlap 1457723, overlap 1457709 1457712 1457723 TTGAACTCATCCAAA TACCAGAAACAAAAAAGCCACTC AGG GAGTGGCTTTTTTGTTTTTTATG GTGCCGGCACCAAGA TERM 1762 1457753 - 1457709 - f 100 -15.3 -3.42283 | opp_overlap 1457723, overlap 1457707 1457712 1457723 GAACTCATCCAAATA CCAGAAACAAAAAAGCCACTC AGG GAGTGGCTTTTTTGTTTTTTA TGGTGCCGGCACCAA TERM 1763 1457750 - 1457712 - f 100 -19.2 -2.86124 | opp_overlap 1457723, overlap 1457709 1457707 1457723 CTCATCCAAATACCA GAAACAAAAAAGCCACTC AGG GAGTGGCTTTTTTGTTTT TTATGGTGCCGGCAC TERM 1764 1457739 - 1457723 - f 100 -12.3 -5.73978 | opp_overlap 1457723, overlap 1457712 1457709 1457707 ACCAGAAACAAAAAA GCCACTC AGG GAGTGGC TTTTTTGTTTTTTAT TERM 1765 1457723 - 1457739 + F 100 -12.3 -6.07374 | opp_overlap 1457723 1457712 1457709 1457707 ACCAGAAACAAAAAA GCCACTC AGG GAGTGGC TTTTTTGTTTTTTAT Shewmr7_1248 1458300 - 1458851 + | cytochrome B561 TERM 1766 1458877 - 1458865 - g 82 -4.1 -5.3671 | AATATAATGAAAAAA CAACT ATT AGCTG CTTTGATTGGTGGGT Shewmr7_1249 1458856 - 1459431 + | hypothetical protein TERM 1767 1459464 - 1459493 + T 88 -10.1 -4.21607 | opp_overlap 1459465 1459472, overlap 1459465 1459472 TGTATTTATCAGCGA ATAAAAAAGCGCC CTTG GGCGCTTTTTTGC TTTCTATTGGATAGG TERM 1768 1459465 - 1459492 + T 100 -13.6 -3.12482 | opp_overlap 1459465 1459472, overlap 1459464 1459472 GTATTTATCAGCGAA TAAAAAAGCGCC CTTG GGCGCTTTTTTG CTTTCTATTGGATAG TERM 1769 1459492 - 1459465 - T 84 -11.4 -3.10164 | opp_overlap 1459465 1459464 1459472, overlap 1459472 GTATTTATCAGCGAA TAAAAAAGCGCC CTTG GGCGCTTTTTTG CTTTCTATTGGATAG TERM 1770 1459472 - 1459485 + T 100 -9.5 -5.4387 | opp_overlap 1459465 1459472, overlap 1459465 1459464 TCAGCGAATAAAAAA GCGCC CTTG GGCGC TTTTTTGCTTTCTAT TERM 1771 1459485 - 1459472 - T 100 -9.5 -5.4833 | opp_overlap 1459472 1459465 1459464, overlap 1459465 TCAGCGAATAAAAAA GCGCC CTTG GGCGC TTTTTTGCTTTCTAT Shewmr7_1250 1459796 - 1459518 - | hypothetical protein Shewmr7_1251 1460924 - 1459806 - | A/G-specific DNA-adenine glycosylase TERM 1772 1459914 - 1459926 + g 70 -4.8 -4.68384 | TTGATTGATGTTATA CCAG AGAGA CTGG TTTTGTTCCATGACT TERM 1773 1461562 - 1461547 - g 72 -3.9 -4.82901 | overlap 1461548 TCCTTGGCATAAAAA GCGCC ACCATA AGCGC CGTATCGTGCAGGCG trmB 1461104 - 1461820 + | tRNA (guanine-N(7))-methyltransferase TERM 1774 1461799 - 1461824 + F 82 -7.7 -4.5538 | gap 1 TGGCGTGTGGGATCT GATGTTTGAGCG TAT CGCTTAA-CATC TTTTATGGATTTTAT Shewmr7_1253 1461866 - 1462192 + | hypothetical protein TERM 1775 1462744 - 1462754 + G 74 -6.8 -4.34008 | opp_overlap 1462744, overlap 1462740 GGCGATGTCGATACA GTGC TGC GCAC TTATTTTCATTACTG Shewmr7_1254 1462192 - 1463106 + | glutaminase TERM 1776 1463093 - 1463112 + F 84 -3.6 -5.45652 | GCCAGCGTCTCGGAC GTTCAATC TTCT GATTTAAC TTTTTTATTAGCACT Shewmr7_1255 1463285 - 1464106 + | hypothetical protein TERM 1777 1464201 - 1464226 + F 100 -10.5 -5.20534 | gap 1, opp_overlap 1464201 GATATAAATGAAAAA GCCCCAG-TACT TTA AGTGTCTGGGGC TTTTTCTTGATTCAT TERM 1778 1464226 - 1464201 - f 100 -8.3 -5.07011 | gap 1, opp_overlap 1464201 GATATAAATGAAAAA GCCCCAG-TACT TTA AGTGTCTGGGGC TTTTTCTTGATTCAT Shewmr7_1256 1464529 - 1465470 + | LysR family transcriptional regulator TERM 1779 1465817 - 1465843 + T 100 -11.7 -5.67967 | ATCCTAGTTTTTGGT TTACCTCAGCT CATTA GGCTGAGGTAA TTTTTTTCTGATGGT TERM 1780 1466027 - 1465988 - T 100 -18.2 -3.86822 | opp_overlap 1465993 1466000, overlap 1465989 1466000 CAAGCCGGTGATAAA TCCAATAAAAAAGCCACT TGAT AGTGGCTTTTTTATTGGC TGCGATTTAACGATG TERM 1781 1466026 - 1465989 - T 100 -21.7 -2.91772 | opp_overlap 1465993 1466000, overlap 1465988 1466000 AAGCCGGTGATAAAT CCAATAAAAAAGCCACT TGAT AGTGGCTTTTTTATTGG CTGCGATTTAACGAT TERM 1782 1465993 - 1466022 + T 100 -15.3 -3.08966 | opp_overlap 1465989 1465988 1466000, overlap 1466000 CGGTGATAAATCCAA TAAAAAAGCCACT TGAT AGTGGCTTTTTTA TTGGCTGCGATTTAA TERM 1783 1466015 - 1466000 - T 100 -9 -5.52096 | opp_overlap 1465993 1466000, overlap 1465989 1465988 AAATCCAATAAAAAA GCCACT TGAT AGTGGC TTTTTTATTGGCTGC TERM 1784 1466000 - 1466015 + T 100 -9 -5.4833 | opp_overlap 1466000 1465989 1465988, overlap 1465993 AAATCCAATAAAAAA GCCACT TGAT AGTGGC TTTTTTATTGGCTGC TERM 1785 1466059 - 1466088 + T 87 -8.5 -4.54821 | opp_overlap 1466067, overlap 1466060 TATTCGCAACGGCGT TCAAGGGAGGCTA GCGT TAGCCTCCCAAGG TTTTATGCTTAGGCT TERM 1786 1466060 - 1466087 + T 76 -9.8 -3.3217 | opp_overlap 1466067, overlap 1466059 ATTCGCAACGGCGTT CAAGGGAGGCTA GCGT TAGCCTCCCAAG GTTTTATGCTTAGGC Shewmr7_1257 1467944 - 1466097 - | hypothetical protein TERM 1787 1468383 - 1468372 - R 71 -4.4 -4.79174 | AGTGAATTAACAAAA TTGC GTCA GCAA ATCGTTCACAAACAT Shewmr7_1258 1469520 - 1468363 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 1788 1468954 - 1468931 - G 71 -6.6 -4.2586 | opp_overlap 1468930, overlap 1468932 TGATACCAAGACAAA TGCGGCGG ATTGAGCG CCGCCGCG GTATCTATATCCGCC Shewmr7_1259 1470137 - 1469520 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 1789 1470255 - 1470283 + r 100 -21.9 -3.36671 | opp_overlap 1470255 TAAAGGACAGAAAAA GGCAGGACGATAC TTG GTATCGTCCTGCC TTATGAGGTTGAGAT TERM 1790 1470283 - 1470255 - R 100 -21.9 -5.06585 | opp_overlap 1470255 TAAAGGACAGAAAAA GGCAGGACGATAC TTG GTATCGTCCTGCC TTATGAGGTTGAGAT Shewmr7_1260 1470732 - 1470298 - | hypothetical protein Shewmr7_1261 1471091 - 1470801 - | hypothetical protein TERM 1791 1471078 - 1471051 - G 91 -11.4 -4.2074 | overlap 1471055 GGTTGAATATACAAA TTAAGCAGCAAG TCGC CTTGCTGCATAA TGACTGCGCTCATTA TERM 1792 1471074 - 1471055 - G 85 -12.2 -3.69088 | overlap 1471051 GAATATACAAATTAA GCAGCAAG TCGC CTTGCTGC ATAATGACTGCGCTC Shewmr7_1262 1471639 - 1471091 - | protein of unknown function YGGT TERM 1793 1471561 - 1471548 - G 76 -4.5 -4.92783 | AAGGGATTATAAAAA TCGGC ACGG GCCAA AGGTAGCCAGATCCG Shewmr7_1263 1472533 - 1471715 - | pyrroline-5-carboxylate reductase Shewmr7_1264 1473474 - 1472758 - | hypothetical protein Shewmr7_1265 1473510 - 1474547 + | pilus retraction ATPase PilT Shewmr7_1266 1474557 - 1475669 + | twitching motility protein TERM 1794 1475692 - 1475709 + F 100 -11.3 -5.66684 | opp_overlap 1475692 TGCGGTGATGTTAAA GCAGCTC CCTT GAGCTGC TTTTTTTATCGCTTA TERM 1795 1475709 - 1475692 - f 90 -11.3 -3.59979 | opp_overlap 1475692 TGCGGTGATGTTAAA GCAGCTC CCTT GAGCTGC TTTTTTTATCGCTTA Shewmr7_1267 1475768 - 1476379 + | glutathione peroxidase TERM 1796 1476748 - 1476728 - g 70 -2.5 -4.95806 | overlap 1476708 AAATTATCAGAAAAA TTAACGGCC GAT GGGCATCAA GTATCAGTACATTTA Shewmr7_1268 1476449 - 1477432 + | ferrochelatase TERM 1797 1477453 - 1477480 + T 100 -10 -5.0809 | opp_overlap 1477458, overlap 1477458 ATAAGCACAGAAATA AAAAAGGATAGC TTAG GCTATCCTTTTG TTTTTATGATTTATT TERM 1798 1477475 - 1477458 - T 100 -9.9 -5.76237 | opp_overlap 1477458 1477453 CACAGAAATAAAAAA GGATAGC TTAG GCTATCC TTTTGTTTTTATGAT TERM 1799 1477458 - 1477475 + T 100 -9.9 -5.3658 | opp_overlap 1477458, overlap 1477453 CACAGAAATAAAAAA GGATAGC TTAG GCTATCC TTTTGTTTTTATGAT Shewmr7_1269 1477919 - 1477494 - | Holliday junction resolvase-like protein Shewmr7_1270 1478513 - 1477950 - | hypothetical protein Shewmr7_1271 1478911 - 1478582 - | translation initiation factor Sui1 TERM 1800 1479009 - 1478983 - R 100 -10.8 -5.47218 | overlap 1479005 GGGGAGGTAAAAAAA GGCCACTGACAG AGA CTGAAAGTGGCC GAAGGTCAATGCTAG Shewmr7_1272 1479375 - 1479061 - | hypothetical protein TERM 1801 1480049 - 1480031 - g 82 -6.8 -4.83615 | TATCCGTGATAAAAA TACTCCTT CGG AAAGAGTA CAGCTGATCAACGAA Shewmr7_1273 1479555 - 1480115 + | hypothetical protein TERM 1802 1480121 - 1480167 + F 100 -13.3 -3.67417 | gap 1, opp_overlap 1480136, overlap 1480136 1480161 AAACAAATAATTTAC TTTTAGTC-TAAAAAAGCGGCC CTTT GGCCGCTTTTTTGTGGCCAAAA TTTAGGCTTGAGTGT TERM 1803 1480151 - 1480136 - f 100 -11.8 -5.0538 | opp_overlap 1480121 1480136 TTTTAGTCTAAAAAA GCGGCC CTTT GGCCGC TTTTTTGTGGCCAAA TERM 1804 1480136 - 1480151 + F 100 -11.8 -5.24129 | opp_overlap 1480136, overlap 1480121 TTTTAGTCTAAAAAA GCGGCC CTTT GGCCGC TTTTTTGTGGCCAAA Shewmr7_1274 1480469 - 1481110 + | hypothetical protein TERM 1805 1481109 - 1481143 + T 100 -16 -2.87186 | opp_overlap 1481117, overlap 1481117 ACCAGCATACTCACT AATAAAAATGGGGCAT TAA ATGCCCCATTTTTATG CTTATTGCTGTGCTT TERM 1806 1481135 - 1481117 - T 100 -13.2 -5.14163 | opp_overlap 1481109 1481117 ACTCACTAATAAAAA TGGGGCAT TAA ATGCCCCA TTTTTATGCTTATTG TERM 1807 1481117 - 1481135 + T 100 -13.2 -5.03945 | opp_overlap 1481117, overlap 1481109 ACTCACTAATAAAAA TGGGGCAT TAA ATGCCCCA TTTTTATGCTTATTG Shewmr7_1275 1481738 - 1481145 - | thiol peroxidase (atypical 2-Cys peroxiredoxin) TERM 1808 1481718 - 1481702 - G 73 -2.9 -5.01811 | overlap 1481704 1481707 CCATTAAACTAAAAA TACAGCC AGC GGCTAGA AATGAAACATACTTT TERM 1809 1481831 - 1481814 - R 100 -12.7 -5.32882 | opp_overlap 1481805 1481814 TATCACCATAAAAAA GGCCGGT ATTT ACCGGCC TTATAATGTTATTGC TERM 1810 1481814 - 1481831 + r 100 -12.7 -3.56958 | opp_overlap 1481814, overlap 1481805 TATCACCATAAAAAA GGCCGGT ATTT ACCGGCC TTATAATGTTATTGC Shewmr7_1276 1482677 - 1481850 - | MscS mechanosensitive ion channel TERM 1811 1481916 - 1481928 + g 78 -4.1 -5.10877 | AATTTCAATGTTGGC TGCAT CGA GTGCA TTTTTGATTTGTTCT Shewmr7_1277 1483284 - 1482709 - | OmpA/MotB domain-containing protein TERM 1812 1482984 - 1482965 - G 73 -2.8 -5.00616 | TTCGCGTCTAAAAAA GCTTTTAC TAAG GCTAAAGC TTTCCATTGCGATAA Shewmr7_1278 1483584 - 1484597 + | L-threonine aldolase TERM 1813 1484608 - 1484627 + F 100 -10 -5.29782 | opp_overlap 1484598 TATAATCGGCGTGAC GCCCAAGT GAAA GCTTGGGC TTTTTTATACCTCTG Shewmr7_1279 1484761 - 1486227 + | putative signal transduction protein Shewmr7_1280 1486771 - 1486232 - | hypothetical protein Shewmr7_1281 1487647 - 1486823 - | hypothetical protein Shewmr7_1282 1489481 - 1487745 - | diguanylate cyclase TERM 1814 1488794 - 1488782 - G 76 -5.5 -4.84359 | CCATTTCGATAAAAA GACGC ATG GCATC CCGTTGAAGCTGGTT Shewmr7_1283 1490971 - 1489478 - | extracellular solute-binding protein TERM 1815 1491076 - 1491052 - R 100 -11.5 -5.47218 | TTTGAGGCAAAAAAA CGGTGATCTAA TAA TTGGATCACCG AAAAAGGGTGGGAGA Shewmr7_1284 1491535 - 1491101 - | CopG family transcriptional regulator Shewmr7_1285 1492277 - 1491495 - | hypothetical protein TERM 1816 1493026 - 1492996 - g 100 -6 -5.84381 | opp_overlap 1493002 GGAGCAAGAAAAAAA CACCCCGACACTCG TTG CGACTGCCTGTGTG TATGGCGATAAGGCT Shewmr7_1286 1492805 - 1493269 + | acetyltransferase TERM 1817 1493280 - 1493308 + F 93 -11.9 -3.72632 | TTTAGCATTGCCATA TTCAGGATAAGTT GAC GGCTTATCCTGAA TTATTGGGTCTGTGT Shewmr7_1287 1493505 - 1493714 + | hypothetical protein Shewmr7_1288 1493842 - 1494144 + | NrfJ-related protein TERM 1818 1494181 - 1494213 + F 100 -13.5 -3.53012 | opp_overlap 1494186, overlap 1494186 TGTTGCGATGAGTTC CTAAACCGCCTCG CCTTGTT CGAGGCGGTTTTG TTTACAGCGGCAAAC TERM 1819 1494186 - 1494208 + F 100 -12 -4.86731 | opp_overlap 1494186, overlap 1494181 CGATGAGTTCCTAAA CCGCCTCG CCTTGTT CGAGGCGG TTTTGTTTACAGCGG TERM 1820 1494208 - 1494186 - f 91 -12 -3.56092 | opp_overlap 1494186 1494181 CGATGAGTTCCTAAA CCGCCTCG CCTTGTT CGAGGCGG TTTTGTTTACAGCGG Shewmr7_1289 1494312 - 1494833 + | acetyltransferase Shewmr7_1290 1494897 - 1495427 + | acetyltransferase TERM 1821 1495739 - 1495758 + T 95 -4.8 -5.84381 | opp_overlap 1495739 AGAGTAATAAAAAAA CCGCCTCG TTTC CTTGGCGG TTTTTTTATTGGTCA TERM 1822 1495758 - 1495739 - T 95 -4.8 -5.85737 | opp_overlap 1495739 AGAGTAATAAAAAAA CCGCCTCG TTTC CTTGGCGG TTTTTTTATTGGTCA Shewmr7_1291 1496478 - 1495783 - | pirin domain-containing protein TERM 1823 1496046 - 1496066 + g 77 -9.6 -3.72695 | CACCCGTTGGGGTGA CCACGGCG GTCAG CGCCGAGG TTTGCTCGAAGGCCT Shewmr7_1292 1496932 - 1496489 - | DoxX family protein TERM 1824 1497892 - 1497904 + G 77 -10.5 -3.53733 | opp_overlap 1497892, overlap 1497890 GTTGAGATCCCAAGA CCGGC GCA GCCGG TGTTTCTCGCATGGC TERM 1825 1497904 - 1497892 - g 71 -10.5 -3.07962 | opp_overlap 1497892 1497890 GTTGAGATCCCAAGA CCGGC GCA GCCGG TGTTTCTCGCATGGC Shewmr7_1293 1497097 - 1497990 + | LysR family transcriptional regulator TERM 1826 1498383 - 1498399 + T 80 -8.7 -4.07124 | opp_overlap 1498382 AATCCCTGACACTAG GCGCTTA CAC TGAGCGC TTTATATGGCTGGTG Shewmr7_1294 1500138 - 1498387 - | metallophosphoesterase TERM 1827 1500192 - 1500206 + r 100 -11.4 -4.06502 | opp_overlap 1500170 1500192 CCCAAAAACAAGAAA GGGAGC CAA GCTCCC TTTACTTTAACAATG TERM 1828 1500206 - 1500192 - R 100 -11.4 -4.76802 | opp_overlap 1500192, overlap 1500170 CCCAAAAACAAGAAA GGGAGC CAA GCTCCC TTTACTTTAACAATG Shewmr7_1295 1501372 - 1500236 - | hypothetical protein TERM 1829 1501439 - 1501449 + H 76 -6.8 -4.43012 | TGTATAATTCGCCGC CCTG TTG CAGG TTTTGGTGTTGAGGT Shewmr7_1296 1501472 - 1502593 + | hypothetical protein TERM 1830 1503160 - 1503179 + G 70 -8.6 -3.73775 | gap 1, opp_overlap 1503159 1503156, overlap 1503163 ATGGCGTTAAAGTAT GAC-CCGAG ACG CTCGGTGTC TTTACTGGAGCTGGC Shewmr7_1297 1502626 - 1503414 + | type IV pilus biogenesis/stability protein PilW TERM 1831 1504217 - 1504196 - g 73 -5.7 -4.55721 | overlap 1504184 1504197 1504208 AAACGCGACACAAAA TGGCGCGAC CAAT ACCGCGCCG GTGCAGAACCAAACT Shewmr7_1298 1503411 - 1504541 + | hypothetical protein ispG 1504583 - 1505698 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 1832 1505758 - 1505780 + F 72 -6.2 -4.38313 | opp_overlap 1505770, overlap 1505759 CTCAAGCCTTGAGCT AGACCCCG AAACCGA CGGGGTCA TTTTACGTTTAGTGT TERM 1833 1505759 - 1505779 + F 74 -9.7 -3.21904 | opp_overlap 1505770, overlap 1505758 TCAAGCCTTGAGCTA GACCCCG AAACCGA CGGGGTC ATTTTACGTTTAGTG TERM 1834 1506227 - 1506215 - g 74 -4.7 -4.8543 | GAACGTCCACAAAAA GGCCG TTA CCGCC AATTCCACCAGTTTG Shewmr7_1300 1505858 - 1507135 + | histidyl-tRNA synthetase TERM 1835 1507424 - 1507387 - g 71 -5 -4.57569 | opp_overlap 1507405, overlap 1507399 TGAGTTTTCCAAAAA TCACGA-CCAAAAGGGCT ATCA AGCCCTGCTGGATC-TGA TCGTTGCGAAAACCG TERM 1836 1507412 - 1507399 - g 79 -8.1 -4.33708 | opp_overlap 1507405, overlap 1507387 AAATCACGACCAAAA GGGCT ATCA AGCCC TGCTGGATCTGATCG TERM 1837 1507697 - 1507683 - g 87 -10 -4.39571 | overlap 1507676 CGGATAAAGCGAAAA CCGCTT ACC AAGCGG CAATGGACAATGGCG Shewmr7_1301 1507148 - 1507768 + | hypothetical protein Shewmr7_1302 1507780 - 1508967 + | outer membrane protein assembly complex subunit YfgL TERM 1838 1508990 - 1509014 + F 100 -13.6 -5.06816 | TGTTATCCTTGTAGA GCCCCTGGAA GTGTG TTCCGGGGGC TTTTTATTGAAAAGT TERM 1839 1509014 - 1509028 + F 73 -3.6 -5.00616 | AGTGTGTTCCGGGGG CTTTTT ATT GAAAAG TTTTTTAGAGGCAAA TERM 1840 1509392 - 1509381 - g 81 -5.8 -5.02074 | GTAGCCGTCAAAAAA CCAC TTTC GTGG TGGCTAACAAGATTG engA 1509047 - 1510513 + | GTP-binding protein EngA TERM 1841 1510570 - 1510541 - T 79 -10.9 -3.09492 | opp_overlap 1510548, overlap 1510548 GGCTTAAGCTGAACA TAAAAAAGGAACC CTAG GGTTCCTTTTTTT GTTGGCGCATTTTAG TERM 1842 1510563 - 1510548 - T 100 -9 -5.47159 | opp_overlap 1510548, overlap 1510541 GCTGAACATAAAAAA GGAACC CTAG GGTTCC TTTTTTTGTTGGCGC TERM 1843 1510548 - 1510563 + T 100 -9 -5.7946 | opp_overlap 1510541 1510548 GCTGAACATAAAAAA GGAACC CTAG GGTTCC TTTTTTTGTTGGCGC xseA 1512009 - 1510663 - | exodeoxyribonuclease VII large subunit Shewmr7_1305 1512132 - 1513598 + | inositol-5-monophosphate dehydrogenase TERM 1844 1513602 - 1513643 + F 90 -11 -4.05033 | gap 1, opp_overlap 1513600 1513612, overlap 1513612 TCAGGCTCTTAAACG TCTGTGAAAACGGGGCGGC GATAA GCCGCCCTGTTATTA-AGA TTTGTATGCCCTCAA TERM 1845 1513612 - 1513634 + F 100 -14.1 -3.71991 | opp_overlap 1513600 1513612, overlap 1513602 AAACGTCTGTGAAAA CGGGGCGGC GATAA GCCGCCCTG TTATTAAGATTTGTA TERM 1846 1513634 - 1513612 - f 100 -11.9 -4.0896 | opp_overlap 1513602 1513612, overlap 1513600 AAACGTCTGTGAAAA CGGGGCGGC GATAA GCCGCCCTG TTATTAAGATTTGTA guaA 1513716 - 1515293 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1847 1515343 - 1515329 - f 87 -8.5 -4.45945 | opp_overlap 1515329, overlap 1515324 ATGCATTAACGAAAA GGCGC CAAGT GCGCC TTTTTTATTGGTTAT TERM 1848 1515329 - 1515343 + F 100 -8.5 -5.57396 | opp_overlap 1515329 1515324 ATGCATTAACGAAAA GGCGC CAAGT GCGCC TTTTTTATTGGTTAT Shewmr7_1307 1515400 - 1516068 + | tRNA-adenosine deaminase Shewmr7_1308 1517944 - 1516508 - | lytic transglycosylase, catalytic TERM 1849 1516920 - 1516908 - G 82 -10.5 -3.91984 | opp_overlap 1516905 ATATCCCGTAAATAA GCGGC GCC GCCGC GAATACTTTCTTTCG TERM 1850 1519266 - 1519242 - g 76 -5.1 -4.75174 | gap 1 TATCGAATTTAAAAA TCCCA-GGTT TTGTAC AACCATGGGA AGGTAGCTACGGTAA TERM 1851 1519510 - 1519499 - g 72 -3.6 -4.88736 | overlap 1519506 1519507 GAGCACGTACAAAAA GGCG AAAT CACC GTCGGTGCTAAGCTG Shewmr7_1309 1518224 - 1522105 + | phosphoribosylformylglycinamidine synthase TERM 1852 1522166 - 1522147 - f 100 -12.2 -5.54894 | opp_overlap 1522147 AAGTGAGCAAAAAAA GGAGCGAA ATTT TTCGCTCC TTTTTTATATATAAA TERM 1853 1522147 - 1522166 + F 100 -12.2 -5.4251 | opp_overlap 1522147 AAGTGAGCAAAAAAA GGAGCGAA ATTT TTCGCTCC TTTTTTATATATAAA TERM 1854 1522377 - 1522401 + F 84 -11.3 -3.09831 | opp_overlap 1522377, overlap 1522374 ACATAAAAGCAAAAA GCCCCCAACTC ATC GAGAAGGGGGC TCGTTTTGCGCTAAC TERM 1855 1522401 - 1522377 - f 100 -11.3 -5.15526 | opp_overlap 1522377 1522374 ACATAAAAGCAAAAA GCCCCCAACTC ATC GAGAAGGGGGC TCGTTTTGCGCTAAC Shewmr7_1310 1523348 - 1524904 + | cytochrome bd ubiquinol oxidase, subunit I Shewmr7_1311 1524920 - 1526059 + | cytochrome d ubiquinol oxidase, subunit II Shewmr7_1312 1526078 - 1526194 + | cyd operon protein YbgT TERM 1856 1526227 - 1526242 + T 100 -11.8 -5.4505 | opp_overlap 1526227 CTGAACCCTTTAAAA CCCCGC AACA GCGGGG TTTTTTATTACCACG TERM 1857 1526242 - 1526227 - T 100 -11.8 -4.11484 | opp_overlap 1526227 CTGAACCCTTTAAAA CCCCGC AACA GCGGGG TTTTTTATTACCACG TERM 1858 1526395 - 1526371 - T 70 -5.7 -4.38927 | overlap 1526373 GGTTTACATAAGAAA CACGGCTCAAT TTG ATTTAGCCGCA CAGTATCGATAAGCC TERM 1859 1526393 - 1526373 - T 75 -8.3 -3.79864 | overlap 1526371 TTTACATAAGAAACA CGGCTCAAT TTG ATTTAGCCG CACAGTATCGATAAG TERM 1860 1526688 - 1526669 - T 100 -10 -5.61824 | opp_overlap 1526669 1526671 GAAAAGTCAAAAAAA TACCACCC AAGT GGGCGGTA TCTTAACAAAGCAAT Shewmr7_1313 1528715 - 1526712 - | methyl-accepting chemotaxis sensory transducer TERM 1861 1527274 - 1527290 + g 70 -8.7 -3.54741 | GCCTGATGGCTACTA CTGAGCT GTT GGCTCAG TTTCAACAGATCCTG TERM 1862 1529148 - 1529118 - g 74 -11.2 -3.12351 | opp_overlap 1529123, overlap 1529123 GTGCCCTAGAGTTAA CCAAAGTGCCCACC GAT GATGAGCACTTTGT GGCCTTAAAATTAGA TERM 1863 1529143 - 1529123 - g 78 -9.7 -3.94746 | opp_overlap 1529123, overlap 1529118 CTAGAGTTAACCAAA GTGCCCACC GAT GATGAGCAC TTTGTGGCCTTAAAA Shewmr7_1314 1528973 - 1529218 + | hypothetical protein Shewmr7_1315 1532283 - 1529203 - | acriflavin resistance protein TERM 1864 1530496 - 1530478 - G 76 -5.9 -4.65747 | TAAGTTGTAATAAAA GGAAGGC GTATT GCCCCCC ACAACCCAATCGACT Shewmr7_1316 1533407 - 1532286 - | RND family efflux transporter MFP subunit TERM 1865 1533450 - 1533493 + H 100 -10.5 -4.55491 | opp_overlap 1533449 1533452 1533454, overlap 1533449 TTAAGTTTATGTAAC TAGACTTGCTAGTCTAGTT GTGCGG AACTAGACTGTCTAGTCTA TTTTGTGCTTAACTA Shewmr7_1317 1533545 - 1534165 + | TetR family transcriptional regulator TERM 1866 1534806 - 1534822 + G 71 -6.5 -4.19953 | overlap 1534807 ATGTATGCCTTCGAG TCGGGCA ATA TGCTCGG TTTTGGCGTTGCGTA TERM 1867 1535173 - 1535219 + G 79 -7.3 -4.45544 | gap 1, opp_overlap 1535186 1535190 CCCATCAAGCGGCGC TCG-ACATCGATAACCAAGGCG CTGC CGCCTTGGATCTCGAGTTCCGA TTTTAATTACTGGCC TERM 1868 1535205 - 1535186 - g 84 -13.6 -3.39327 | opp_overlap 1535173, overlap 1535190 GCTCGACATCGATAA CCAAGGCG CTGC CGCCTTGG ATCTCGAGTTCCGAT Shewmr7_1318 1534218 - 1535225 + | hypothetical protein TERM 1869 1535229 - 1535267 + T 100 -13.8 -4.62069 | opp_overlap 1535229, overlap 1535232 TTCCGATTTTAATTA CTGGCCCAGCATGGCCTC TTT GAGGCTCTTCTGGGCTGG TTTTTCCCCTAGCCA TERM 1870 1535232 - 1535264 + T 100 -14.1 -3.25166 | opp_overlap 1535229, overlap 1535229 CGATTTTAATTACTG GCCCAGCATGGCCTC TTT GAGGCTCTTCTGGGC TGGTTTTTCCCCTAG Shewmr7_1319 1535786 - 1535226 - | hypothetical protein TERM 1871 1535373 - 1535396 + g 100 -12.5 -4.17002 | ACCACGGCTTTTGTT GGCGACCAA GGTGAA TTGGTCGCC TTCTTTGATTTCATC Shewmr7_1320 1536501 - 1536022 - | hypothetical protein TERM 1872 1536650 - 1536676 + r 79 -10.8 -2.92026 | overlap 1536652 AGGGACTCGAACCCC GATCGGCCGCTT AGG AGGCGGCTGCTC TATCCTGTTGAGCTA TERM 1873 1536702 - 1536717 + r 75 -5.4 -4.84539 | AGCTATGAAGAGACG CCAGTG ATTA TACTGG TTTTATCTTTGATTA Shewmr7_1321 1537920 - 1536754 - | hypothetical protein Shewmr7_1322 1538160 - 1538792 + | hypothetical protein TERM 1874 1539046 - 1539025 - g 71 -5.9 -4.42653 | gap 1, opp_overlap 1539027, overlap 1539027 1539028 AGTGTATGGACAAAA GATCACTGCC AAT AGCAGTG-TC AGTGATTGGATGCTG Shewmr7_1323 1538789 - 1539238 + | hypothetical protein TERM 1875 1539296 - 1539328 + T 100 -17.9 -4.07562 | opp_overlap 1539296 1539301, overlap 1539301 TGCTTTACCGATAAA CAAAAGCCGCACTAA GTT TTAGCGCGGCTTTTG TTTATATCCCGTTTA TERM 1876 1539328 - 1539296 - T 100 -20.1 -3.91897 | opp_overlap 1539296 1539301, overlap 1539301 TGCTTTACCGATAAA CAAAAGCCGCACTAA GTT TTAGCGCGGCTTTTG TTTATATCCCGTTTA TERM 1877 1539301 - 1539323 + T 100 -12 -5.05113 | opp_overlap 1539296 1539301, overlap 1539296 TACCGATAAACAAAA GCCGCACTAA GTT TTAGCGCGGC TTTTGTTTATATCCC TERM 1878 1539323 - 1539301 - T 100 -14.2 -5.0065 | opp_overlap 1539301 1539296, overlap 1539296 TACCGATAAACAAAA GCCGCACTAA GTT TTAGCGCGGC TTTTGTTTATATCCC Shewmr7_1324 1539785 - 1539360 - | FlgN family protein TERM 1879 1539714 - 1539677 - G 71 -5.5 -4.4715 | opp_overlap 1539684, overlap 1539683 CCGCAAGCGATAAAA GCAAATCGGCGTTTTGG TCAA CCAAAGCGCCTTTTTCC TTTAGAATAATCTGT TERM 1880 1539684 - 1539707 + g 100 -13.2 -4.99134 | opp_overlap 1539683 1539677 CGATAAAAGCAAATC GGCGTTTTGG TCAA CCAAAGCGCC TTTTTCCTTTAGAAT Shewmr7_1325 1540114 - 1539788 - | anti-sigma-28 factor, FlgM TERM 1881 1539833 - 1539845 + g 71 -7.7 -4.1196 | TTCGAAGCTGGCAAT GTTGG CCG CCAAC TTTTCGGGATCAATT flgA 1540897 - 1540190 - | flagellar basal body P-ring biosynthesis protein FlgA Shewmr7_1327 1541103 - 1542023 + | response regulator receiver modulated CheW protein Shewmr7_1328 1542125 - 1542964 + | MCP methyltransferase, CheR-type TERM 1882 1543005 - 1542986 - f 100 -10.8 -5.35815 | opp_overlap 1542986 GATATTAAATAAAAA TTACCGAC AATA GTCGGTAA TTTTTTACCCCGAAA TERM 1883 1542986 - 1543005 + F 100 -10.8 -5.00616 | opp_overlap 1542986 GATATTAAATAAAAA TTACCGAC AATA GTCGGTAA TTTTTTACCCCGAAA TERM 1884 1543278 - 1543258 - g 70 -9.1 -3.53012 | TTCTGCGGCCTTAAA TGTTGCTAA AAC TCAGCAACA GCAACGCAATAGCCT flgB 1543109 - 1543516 + | flagellar basal body rod protein FlgB flgC 1543519 - 1543935 + | flagellar basal body rod protein FlgC flgD 1543960 - 1544730 + | flagellar basal body rod modification protein flgE 1544793 - 1546154 + | flagellar hook protein FlgE TERM 1885 1546170 - 1546203 + F 100 -12.5 -3.66256 | overlap 1546168 1546171 GCTGGTTTCTCCCTT TTCTAAGTGTTGCCG CTGG CGGCAACACTTAGCC TCTTTTAGCGCTATA TERM 1886 1546171 - 1546202 + F 100 -16 -2.79272 | overlap 1546170 1546168 CTGGTTTCTCCCTTT TCTAAGTGTTGCCG CTGG CGGCAACACTTAGC CTCTTTTAGCGCTAT flgF 1546327 - 1547070 + | flagellar basal body rod protein FlgF flgG 1547081 - 1547869 + | flagellar basal body rod protein FlgG flgH 1547882 - 1548556 + | flagellar basal body L-ring protein flgI 1548568 - 1549659 + | flagellar basal body P-ring protein TERM 1887 1549782 - 1549760 - g 86 -9.1 -4.53036 | TCAGAAAGATGAAAA GGGCGCCTT GAAAA AAGTCGCCC AACAATTTGAAGGCG flgJ 1549677 - 1550831 + | peptidoglycan hydrolase Shewmr7_1338 1550872 - 1552797 + | flagellar hook-associated protein FlgK flgL 1552809 - 1554017 + | flagellar hook-associated protein FlgL TERM 1888 1554271 - 1554251 - g 75 -10.5 -3.36749 | TACTGTTAATACCAA TGTGACCTC ATT GAAGTCACA AAAAAACCTAAACGG Shewmr7_1340 1554228 - 1555634 + | flagellin domain-containing protein TERM 1889 1555662 - 1555679 + F 95 -7.7 -5.09521 | opp_overlap 1555657 1555662 ATTTTGAAACTAAAA TGCCAGT AATT GCTGGCA TTTTTAATTTATTGA TERM 1890 1555679 - 1555662 - f 76 -7 -4.55128 | opp_overlap 1555662, overlap 1555657 ATTTTGAAACTAAAA TGCCAG TAATTG CTGGCA TTTTTAATTTATTGA Shewmr7_1341 1555845 - 1557248 + | flagellin domain-containing protein TERM 1891 1557281 - 1557302 + F 100 -12.3 -4.70107 | GTTTGATTGGGCAGA GGGAGGGCA GTTT TGCTCTCCC TTTATTGTTTTAGTG Shewmr7_1342 1557364 - 1557780 + | flagellar protein FlaG protein Shewmr7_1343 1557814 - 1559169 + | flagellar hook-associated 2 domain-containing protein fliS 1559533 - 1559934 + | flagellar protein FliS TERM 1892 1559987 - 1559969 - f 100 -8.8 -4.89233 | opp_overlap 1559970, overlap 1559970 GATCAACAGGAAAAA GGACGCAC TGA GTGCGTCT TTTTTTTGGCTTTCG TERM 1893 1559970 - 1559986 + F 100 -12.3 -5.89947 | opp_overlap 1559969 1559970 ATCAACAGGAAAAAG GACGCAC TGA GTGCGTC TTTTTTTTGGCTTTC TERM 1894 1559986 - 1559970 - f 100 -12.3 -3.52455 | opp_overlap 1559970, overlap 1559969 ATCAACAGGAAAAAG GACGCAC TGA GTGCGTC TTTTTTTTGGCTTTC Shewmr7_1345 1560232 - 1561665 + | sigma-54 dependent trancsriptional regulator TERM 1895 1561737 - 1561772 + F 100 -17.8 -2.87564 | opp_overlap 1561732 1561733 1561731 GGCATAAAATCTGCA GTCACTCCGTCAGAAG CAAT TTTTTGACGGAGTGAC TATGTCAGCCCATCC Shewmr7_1346 1561774 - 1562856 + | PAS/PAC sensor signal transduction histidine kinase Shewmr7_1347 1562849 - 1564189 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 1896 1564218 - 1564242 + F 100 -14.3 -3.88498 | ACCTAACTTGCACCT TTGCCACTGGG TTA CCCTGTGGCAA TTTCATATCTGACGA TERM 1897 1564276 - 1564303 + F 100 -16.4 -4.28977 | overlap 1564297 1564299 CCTCAATTCTTTTTA GCACGGCTAAGT GAAA ACTTGGCCGTGC TTTTGCATGTCTTGT Shewmr7_1348 1564367 - 1564705 + | flagellar hook-basal body complex subunit FliE fliF 1564750 - 1566435 + | flagellar MS-ring protein TERM 1898 1567050 - 1567019 - g 71 -7.2 -4.09519 | gap 1 ATCATGGAGAAACAA TTCGCCGGCCAAGGC GGT GCGCAGGC-GGCGAA GATGGGCGGCCTAAA fliG 1566428 - 1567474 + | flagellar motor switch protein G fliH 1567461 - 1568411 + | flagellar assembly protein H fliI 1568380 - 1569717 + | flagellum-specific ATP synthase Shewmr7_1353 1569729 - 1570175 + | flagellar export protein FliJ Shewmr7_1354 1570335 - 1572092 + | flagellar hook-length control protein TERM 1899 1572391 - 1572366 - g 72 -9.7 -3.47573 | gap 1, opp_overlap 1572370 1572377 CGACGGAGACGACAA CGCCAGCCGCCG ATG CGGCAA-TGGCG GCCTATGTGCCAATG fliL 1572176 - 1572703 + | flagellar basal body-associated protein FliL fliM 1572744 - 1573775 + | flagellar motor switch protein FliM fliN 1573788 - 1574162 + | flagellar motor switch protein TERM 1900 1574359 - 1574384 + G 71 -7.5 -4.10552 | TGTTATTGCTTATCT TCGCCTTAGCG TACC TGCTGCGGCGA TTTAATTTAGTGCCG Shewmr7_1358 1574196 - 1574603 + | flagellar biosynthesis protein, FliO fliP 1574600 - 1575346 + | flagellar biosynthesis protein FliP Shewmr7_1360 1575364 - 1575633 + | flagellar biosynthetic protein FliQ fliR 1575638 - 1576435 + | flagellar biosynthesis protein FliR TERM 1901 1576537 - 1576525 - g 78 -6.2 -4.83615 | CAGGCGCGAGAAAAA GGGC AGGTA GCCC GTTCAAAAGAGTTAG TERM 1902 1576838 - 1576851 + G 74 -9.5 -3.55815 | opp_overlap 1576838 1576836 1576835 AAGCCAGTAAAATGA GCCCG ATTG CGGGC TTTAAGCGGATGTTT TERM 1903 1577297 - 1577312 + G 74 -4.6 -4.79352 | overlap 1577298 TTAAATACGATGTGA AGCGCT CTGC AGCGCC TTTTGTTATCGCTAA flhB 1576453 - 1577583 + | flagellar biosynthesis protein FlhB TERM 1904 1577644 - 1577656 + F 84 -6.2 -4.99134 | overlap 1577644 1577643 TGACTTGAAGCGCTA GCGC TTGGC GCGC TTTTTGCTTTCAGGT TERM 1905 1578621 - 1578634 + G 70 -4.5 -4.70879 | overlap 1578622 GTATTGTGCCAGGCA TGCCA CACA TGGCG TTTTTAAGCTTTGCC flhA 1577702 - 1579801 + | flagellar biosynthesis protein FlhA flhF 1579813 - 1581189 + | flagellar biosynthesis regulator FlhF Shewmr7_1365 1581194 - 1582075 + | cobyrinic acid a,c-diamide synthase fliA 1582068 - 1582781 + | flagellar biosynthesis sigma factor Shewmr7_1367 1582829 - 1583212 + | response regulator receiver protein Shewmr7_1368 1583226 - 1583963 + | chemotaxis phosphatase, CheZ TERM 1906 1584874 - 1584864 - g 70 -8.2 -3.65313 | GAATTACATGGCAAA GGCG GCG CGCC TGCAAAAGTGACTGC Shewmr7_1369 1583979 - 1586267 + | CheA signal transduction histidine kinases Shewmr7_1370 1586286 - 1587410 + | chemotaxis-specific methylesterase Shewmr7_1371 1587436 - 1587939 + | hypothetical protein Shewmr7_1372 1588002 - 1588793 + | cobyrinic acid a,c-diamide synthase TERM 1907 1588780 - 1588808 + G 95 -5.4 -5.57054 | GGGAGTTTGGCCATG TCAAAATCGGTT GATGA AACTGTTTTTGA TTTTTTTGAATTATT Shewmr7_1373 1588777 - 1589784 + | CheW protein Shewmr7_1374 1589792 - 1590286 + | CheW protein TERM 1908 1590299 - 1590326 + F 90 -11.4 -3.67622 | opp_overlap 1590302 1590307, overlap 1590295 1590300 1590302 TAAGCTTCCATGATG AGACGACAGATT AGCT AATCTGTCGTCC TTGCTTTTCACGATA TERM 1909 1590300 - 1590325 + F 100 -14.9 -2.80091 | opp_overlap 1590302 1590307, overlap 1590299 1590295 1590302 AAGCTTCCATGATGA GACGACAGATT AGCT AATCTGTCGTC CTTGCTTTTCACGAT TERM 1910 1590302 - 1590323 + F 83 -11.7 -2.94333 | opp_overlap 1590302 1590307, overlap 1590300 1590299 1590295 GCTTCCATGATGAGA CGACAGATT AGCT AATCTGTCG TCCTTGCTTTTCACG TERM 1911 1590323 - 1590302 - f 81 -11.7 -2.82516 | opp_overlap 1590302 1590300 1590299 1590295, overlap 1590307 GCTTCCATGATGAGA CGACAGATT AGCT AATCTGTCG TCCTTGCTTTTCACG Shewmr7_1375 1590441 - 1590839 + | hypothetical protein Shewmr7_1376 1591178 - 1590867 - | FlhB domain-containing protein Shewmr7_1377 1593206 - 1591191 - | hypothetical protein TERM 1912 1591984 - 1591997 + g 86 -6.7 -4.9218 | AGCGGTAATGCGCCT GCCTT GGTA AAGGC TTTTTGTAATACCTC Shewmr7_1378 1593428 - 1594213 + | VacJ family lipoprotein Shewmr7_1379 1594335 - 1595438 + | response regulator receiver protein TERM 1913 1595609 - 1595564 - T 100 -22.3 -3.44051 | opp_overlap 1595572 1595579, overlap 1595565 1595568 1595572 1595579 GTTTTATCATCATAA GCAATCAATAAAAAACGCTGC CATG GCAGCGTTTTTTATTGATTGA ACCTAAAGCTGATTA TERM 1914 1595608 - 1595565 - T 100 -25.8 -2.66216 | opp_overlap 1595572 1595579, overlap 1595564 1595568 1595572 1595579 TTTTATCATCATAAG CAATCAATAAAAAACGCTGC CATG GCAGCGTTTTTTATTGATTG AACCTAAAGCTGATT TERM 1915 1595605 - 1595568 - T 100 -21.7 -3.48036 | opp_overlap 1595572 1595579, overlap 1595565 1595564 1595572 1595579 TATCATCATAAGCAA TCAATAAAAAACGCTGC CATG GCAGCGTTTTTTATTGA TTGAACCTAAAGCTG TERM 1916 1595601 - 1595572 - T 100 -16.7 -3.48466 | opp_overlap 1595572 1595579, overlap 1595568 1595565 1595564 1595579 ATCATAAGCAATCAA TAAAAAACGCTGC CATG GCAGCGTTTTTTA TTGATTGAACCTAAA TERM 1917 1595572 - 1595601 + T 100 -16.7 -3.34895 | opp_overlap 1595568 1595565 1595564 1595572 1595579, overlap 1595579 ATCATAAGCAATCAA TAAAAAACGCTGC CATG GCAGCGTTTTTTA TTGATTGAACCTAAA TERM 1918 1595579 - 1595594 + T 100 -10.4 -5.5604 | opp_overlap 1595572 1595568 1595565 1595564 1595579, overlap 1595572 GCAATCAATAAAAAA CGCTGC CATG GCAGCG TTTTTTATTGATTGA TERM 1919 1595594 - 1595579 - T 100 -10.4 -5.5604 | opp_overlap 1595579 1595572, overlap 1595572 1595568 1595565 1595564 GCAATCAATAAAAAA CGCTGC CATG GCAGCG TTTTTTATTGATTGA Shewmr7_1380 1597091 - 1595622 - | amino acid/peptide transporter TERM 1920 1596445 - 1596455 + g 72 -4 -4.82901 | opp_overlap 1596445 GGAGTTCTACCAATA TTAC CGA GTAA TTTTTGTGCAAACAG TERM 1921 1596624 - 1596611 - G 74 -6.7 -4.431 | overlap 1596619 1596622 TACCCATGTAGAAAA TGGTG AAAG CACCA TCACGGCGATGGTCG TERM 1922 1596629 - 1596641 + g 73 -9.1 -3.78034 | opp_overlap 1596622 1596619 TGAAAGCACCATCAC GGCGA TGG TCGCC TTCTTCGTATAGGTC TERM 1923 1597978 - 1597957 - g 75 -10.3 -3.36878 | TTTATTGATTTAGAA GGCATTTTT CAAG AAAAATGCC CAAACAAACGTTGCC Shewmr7_1381 1597564 - 1598064 + | transcription antitermination protein nusG TERM 1924 1598902 - 1598886 - g 77 -8.7 -4.04355 | opp_overlap 1598885 AAAAAATACATCAAA GCGGTTC CCA AAACCGC AATATTAGTTGGCAT Shewmr7_1382 1598856 - 1601369 + | polysaccharide export protein TERM 1925 1601400 - 1601451 + F 86 -10.2 -3.85698 | gap 1, opp_overlap 1601433, overlap 1601402 1601405 ACGGCCTTCGGCTTC TAGGACGCCGCTGCGTGG-TTCTAG AAT CTAGAAGTCGCGTAGCGACGTGCTC TTTCTAGCAGGGCGC TERM 1926 1601402 - 1601449 + F 100 -12.8 -3.51934 | gap 1, opp_overlap 1601433, overlap 1601400 1601405 GGCCTTCGGCTTCTA GGACGCCGCTGCGTGG-TTCTAG AAT CTAGAAGTCGCGTAGCGACGTGC TCTTTCTAGCAGGGC TERM 1927 1601405 - 1601446 + F 91 -13.1 -2.89797 | gap 1, opp_overlap 1601433, overlap 1601402 1601400 CTTCGGCTTCTAGGA CGCCGCTGCGTGG-TTCTAG AAT CTAGAAGTCGCGTAGCGACG TGCTCTTTCTAGCAG TERM 1928 1601445 - 1601433 - f 73 -9.1 -3.45054 | opp_overlap 1601405 1601402 1601400 TTCTAGAATCTAGAA GTCGC GTA GCGAC GTGCTCTTTCTAGCA TERM 1929 1601458 - 1601478 + F 74 -4.6 -4.84359 | overlap 1601458 1601459 GACGTGCTCTTTCTA GCAGGGCG CAGCC CGCTCTGG TTTTTCTAGAAGTCG Shewmr7_1383 1601536 - 1601889 + | hypothetical protein TERM 1930 1601941 - 1601953 + F 75 -9.1 -3.63627 | opp_overlap 1601941 1601940 TTCGGCCTCTAGAAC GCCAC TAC GTGGC TTTAGAATCTAGAAG TERM 1931 1601980 - 1601968 - f 73 -9.1 -3.45054 | opp_overlap 1601971 CTTTAGAATCTAGAA GTCGC GAA GCGAC GCTCTGCTCTTTCTA TERM 1932 1602059 - 1602040 - f 100 -12.8 -3.48276 | TTTGCCTTTATAGAA GCGCAGCG CTCT CGCCGCGC AGCGTACTAGAATCT Shewmr7_1384 1602091 - 1603065 + | lipopolysaccharide biosynthesis TERM 1933 1603302 - 1603327 + F 73 -3.5 -5.01676 | CCTTATAAGCTAAAA TTTTGATTTAA AAAT TTAAATTGAAA TTATTTTTTTTGGTT TERM 1934 1603911 - 1603936 + G 74 -4.7 -4.8622 | gap 1, opp_overlap 1603911 GCTATGGCAACGTAA TGGGTTCACGTG GTT CG-GTGATCCCA TTTTTCCTTAAAAAG Shewmr7_1385 1603394 - 1604407 + | polysaccharide biosynthesis protein CapD Shewmr7_1386 1604416 - 1605579 + | DegT/DnrJ/EryC1/StrS aminotransferase Shewmr7_1387 1605580 - 1606269 + | acylneuraminate cytidylyltransferase TERM 1935 1606682 - 1606672 - g 74 -6.8 -4.36914 | opp_overlap 1606670 1606672 GTGCTGCTGAGAAAA TGGG ATA CCCA TGTATTATAAAAGCA Shewmr7_1388 1606266 - 1607453 + | hypothetical protein Shewmr7_1389 1607453 - 1608442 + | hypothetical protein Shewmr7_1390 1608429 - 1608920 + | hexapaptide repeat-containing transferase Shewmr7_1391 1608917 - 1609930 + | N-acetylneuraminate synthase TERM 1936 1609968 - 1609987 + G 91 -7.9 -5.1861 | opp_overlap 1609968 TTTATTTTAGGAGAA GGAGCAA GTAAAG TTGCTCC TTTTTTACTGCTACC TERM 1937 1610873 - 1610894 + G 70 -3.1 -4.79683 | gap 1 AGCTGAATTTATAAG TGTT-GCAAA ATT TTTGCCGACA TTTGTTTTATCCGTT Shewmr7_1392 1609908 - 1611134 + | polysaccharide biosynthesis protein TERM 1938 1611275 - 1611262 - g 76 -6.7 -4.52143 | CCCAAATACAACAAA CCTAG CATT CTAGG GGTAGTTATATCTTT TERM 1939 1611299 - 1611309 + G 85 -4 -5.40474 | TATCTTTTTTGTATG CAAT AAA ATTG TTTTTTTCAAGAGAT Shewmr7_1393 1611112 - 1612257 + | hypothetical protein Shewmr7_1394 1612254 - 1613453 + | O-antigen polymerase Shewmr7_1395 1613419 - 1614129 + | glycosyl transferase WecB/TagA/CpsF TERM 1940 1614510 - 1614524 + G 80 -2.8 -5.3472 | AAAGTGGTTTTATGT CAACAA ACA TTGCTG TTTTATTTGTTTTTT TERM 1941 1615542 - 1615561 + G 78 -3.6 -5.10497 | overlap 1615543 GGCGTATTACTGCAT TTTTGCGT AGAG ACGTAAAG TTTTTTAAATCAATT Shewmr7_1396 1614506 - 1615579 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase TERM 1942 1615740 - 1615751 + G 84 -2.2 -5.67283 | TGGAATACCTCATAC CGCT TTTA AGTG TTTTTTGTTTAACTT TERM 1943 1615854 - 1615871 + G 71 -5.5 -4.48483 | overlap 1615850 1615855 TGCATGAAGGTGCAA TCCCACT GATT GGTGGGG TTTCTATTTATTGTA Shewmr7_1397 1615724 - 1616785 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase TERM 1944 1616827 - 1616808 - f 85 -9.3 -4.08945 | opp_overlap 1616808 ACTATTTTTGCAAAA GCCAGCT AACTTA AGCTGGC TTTTTGTTTTAATTT TERM 1945 1616808 - 1616827 + F 100 -9.3 -5.56372 | opp_overlap 1616808 ACTATTTTTGCAAAA GCCAGCT AACTTA AGCTGGC TTTTTGTTTTAATTT Shewmr7_1398 1616858 - 1618210 + | phosphoglucosamine mutase TERM 1946 1618396 - 1618380 - f 76 -7.9 -4.21922 | opp_overlap 1618375 1618375 1618389 GCACCTAAAAGCAAA GCGCTCT AGC AGGGCGC TAGCCTGTTCTACTT Shewmr7_1399 1618466 - 1619485 + | dTDP-glucose 4,6-dehydratase Shewmr7_1400 1620310 - 1619657 - | hypothetical protein Shewmr7_1401 1620912 - 1620406 - | copper resistance lipoprotein NlpE TERM 1947 1621507 - 1621534 + G 76 -11.4 -3.20435 | opp_overlap 1621511, overlap 1621511 GTCGCGAATCATGCG CAAACTGATGGG GCGA CCCATGAGTTTG TTAGTGCCTACTTAG Shewmr7_1402 1621222 - 1622583 + | GAF sensor signal transduction histidine kinase Shewmr7_1403 1622657 - 1623595 + | glucose-1-phosphate thymidylyltransferase Shewmr7_1404 1623582 - 1624124 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1948 1624144 - 1624107 - T 88 -9.9 -4.20531 | opp_overlap 1624100 1624109 1624110, overlap 1624108 GAGAGGGATGCAAAA GCCGCCGTGAGTACCTA GCTT TAGGTACTCACGACATT ATGCATTATTTGACA TERM 1949 1624143 - 1624108 - T 100 -13.4 -3.11836 | opp_overlap 1624100 1624109 1624110, overlap 1624107 AGAGGGATGCAAAAG CCGCCGTGAGTACCTA GCTT TAGGTACTCACGACAT TATGCATTATTTGAC TERM 1950 1624109 - 1624142 + T 100 -12.5 -3.49938 | opp_overlap 1624108 1624107, overlap 1624100 1624110 GAGGGATGCAAAAGC CGCCGTGAGTACCTA GCTT TAGGTACTCACGACA TTATGCATTATTTGA TERM 1951 1624110 - 1624141 + T 100 -16 -2.6924 | opp_overlap 1624108 1624107, overlap 1624109 1624100 AGGGATGCAAAAGCC GCCGTGAGTACCTA GCTT TAGGTACTCACGAC ATTATGCATTATTTG Shewmr7_1405 1626513 - 1624150 - | protein of unknown function DUF940, membrane lipoprotein putative TERM 1952 1625019 - 1624999 - G 91 -9 -4.74917 | overlap 1625000 ACTAAACATATAAAA CCCTTCGG AACCG CCGAAGGA TTGGGACATGGTGGG TERM 1953 1625018 - 1625000 - G 75 -10.3 -3.43323 | overlap 1624999 CTAAACATATAAAAC CCTTCGG AACCG CCGAAGG ATTGGGACATGGTGG Shewmr7_1406 1627298 - 1626513 - | hypothetical protein TERM 1954 1626723 - 1626735 + g 70 -2.7 -4.77438 | overlap 1626722 1626720 ATCGAGTAAACCTGC TTGCT TCA AGTAA TTTTTACTGCTGGCT Shewmr7_1407 1628019 - 1627309 - | putative lipoprotein TERM 1955 1628146 - 1628127 - R 100 -11.4 -5.94713 | opp_overlap 1628129 ATGTCATAAAAAAAA CAACCGCC AAAA GGCGGCTG TTAACAATATGTACT Shewmr7_1408 1628422 - 1628171 - | hypothetical protein Shewmr7_1409 1629820 - 1628696 - | patatin TERM 1956 1629974 - 1629998 + r 95 -11.5 -3.75535 | opp_overlap 1629974 GCGGGAAATAAAAAA CGCACTTAAGT CAG ACTCAAGTGCG TTTGCATCTATATCG TERM 1957 1629998 - 1629974 - R 100 -13.7 -5.63517 | opp_overlap 1629974 GCGGGAAATAAAAAA CGCACTTAAGT CAG ACTCAAGTGCG TTTGCATCTATATCG Shewmr7_1410 1631798 - 1630086 - | prolyl-tRNA synthetase TERM 1958 1630144 - 1630158 + g 76 -3.4 -5.09762 | overlap 1630145 1630147 GGCACATCTTGCTTT TCACCG GTG CGGCGG TTTTTGTATTCAAAT TERM 1959 1631741 - 1631758 + g 70 -3.3 -4.89063 | overlap 1631743 1631744 ATTGATGGCTGATGA CTTCTGC ATTC GCAGGTG TTTCTTTTTGAGTAG Shewmr7_1411 1632598 - 1631969 - | hexapaptide repeat-containing transferase Shewmr7_1412 1633333 - 1632599 - | hypothetical protein TERM 1960 1632716 - 1632727 + g 78 -2.2 -5.24129 | TTGATATAATTTGGG GTCA TCTT TGGC TTTTTTATAGGCAGG Shewmr7_1413 1633808 - 1633428 - | putative lipoprotein TERM 1961 1633857 - 1633837 - R 100 -16.9 -3.97019 | opp_overlap 1633853 ATTAAGGGTAAATAA GCGCAGTCC AAC GGACTGCGC GGTATCGAGCGATTT Shewmr7_1414 1635175 - 1633886 - | hypothetical protein Shewmr7_1415 1638249 - 1635175 - | amidohydrolase TERM 1962 1637129 - 1637147 + g 77 -13.2 -2.53876 | GCGAGGGCCTTGTCT TCGCTCAG GCC CTGAGCGA TGGCTTGACGTAGGC TERM 1963 1638368 - 1638402 + r 100 -18.9 -3.19642 | opp_overlap 1638336 1638377, overlap 1638377 GTAGTGGCATTCAGG CATAAAAAAGCTCGC AGGGC GCGAGCTTTTTTATG TTACTCAATGGTAAT TERM 1964 1638393 - 1638377 - R 100 -10.1 -5.28176 | opp_overlap 1638368 1638377 TTCAGGCATAAAAAA GCTCGCA GGG CGCGAGC TTTTTTATGTTACTC TERM 1965 1638377 - 1638393 + r 100 -9.4 -5.49569 | opp_overlap 1638377, overlap 1638368 TTCAGGCATAAAAAA GCTCGC AGGGC GCGAGC TTTTTTATGTTACTC Shewmr7_1416 1638841 - 1638449 - | histone family protein nucleoid-structuring protein H-NS TERM 1966 1638573 - 1638583 + g 76 -4.6 -5.00616 | TGATATTTTGCTGGA CGTG GAG CGCG TTTTTTACCCACAGC TERM 1967 1638684 - 1638701 + g 70 -9.9 -3.28219 | overlap 1638682 ATTTTAGCATTACGT GCAGCAA TAGC TTGCTGC TCTTCTGCTGCCATT TERM 1968 1638942 - 1638932 - H 70 -2.6 -4.99947 | TCGAATCAAATAAAA TTAT GCA ATAA ACAGAAATTAAATAT TERM 1969 1638970 - 1638944 - H 71 -6.8 -4.23647 | opp_overlap 1638943 1638950, overlap 1638950 AAATTATGCAATAAA CAGAAATTAAAT ATT ATTTAATTTTTG AACTTTTTAAATATG TERM 1970 1638950 - 1638964 + H 71 -4.4 -4.7657 | opp_overlap 1638950 1638944, overlap 1638943 TGCAATAAACAGAAA TTAAAT ATT ATTTAA TTTTTGAACTTTTTA TERM 1971 1639020 - 1639005 - H 73 -5.4 -4.60255 | ATAAGTGTTCAAAAA TGTGGC CAAT ACCACA GTCTTAAAAAATGCA TERM 1972 1639096 - 1639113 + H 87 -8.5 -4.45083 | AGTGGCTCTATCCTG CATTGGT GATG ACCAATG TTTTGTCCATGTACA Shewmr7_1417 1639152 - 1639901 + | electron transfer flavoprotein beta-subunit Shewmr7_1418 1639902 - 1640828 + | electron transfer flavoprotein, alpha subunit TERM 1973 1640851 - 1640890 + F 95 -7.8 -4.99035 | opp_overlap 1640852 1640853 1640856, overlap 1640853 1640856 TGTGATCTAAGTCAA AGTAAGCGGCTTTGCGGT GGCA ACTGCTTAGCCGCTTATG TTTTTATGTGCCTCA TERM 1974 1640888 - 1640853 - f 75 -10.4 -2.8585 | opp_overlap 1640851 1640853 1640856, overlap 1640852 1640856 TGATCTAAGTCAAAG TAAGCGGCTTTGCGGT GGCA ACTGCTTAGCCGCTTA TGTTTTTATGTGCCT TERM 1975 1640853 - 1640888 + F 100 -12.6 -4.11744 | opp_overlap 1640853 1640852 1640856, overlap 1640851 1640856 TGATCTAAGTCAAAG TAAGCGGCTTTGCGGT GGCA ACTGCTTAGCCGCTTA TGTTTTTATGTGCCT TERM 1976 1640856 - 1640885 + F 88 -9.9 -4.16226 | opp_overlap 1640856 1640853 1640852, overlap 1640853 1640851 TCTAAGTCAAAGTAA GCGGCTTTGCGGT GGCA ACTGCTTAGCCGC TTATGTTTTTATGTG Shewmr7_1419 1641200 - 1642768 + | Na+/H+ antiporter NhaC TERM 1977 1642834 - 1642857 + T 100 -15.4 -6.08342 | opp_overlap 1642834 AGAGTTAAAAATAAA TAGGCCAGCA AGTA TGCTGGCCTA TTTTTTTATTTATTA TERM 1978 1642857 - 1642834 - T 100 -15.4 -4.89966 | opp_overlap 1642834 AGAGTTAAAAATAAA TAGGCCAGCA AGTA TGCTGGCCTA TTTTTTTATTTATTA Shewmr7_1420 1645035 - 1642885 - | peptidyl-dipeptidase Dcp TERM 1979 1643164 - 1643187 + g 70 -2.4 -5.01732 | gap 1, opp_overlap 1643156 CTTATAACGTGGTGG CACGGCAGTGA TAT TTAA-GCCGTG TTTTTTCAGCGCATT TERM 1980 1644049 - 1644059 + g 70 -4.6 -4.72486 | overlap 1644056 AAACATGCTGTATAC CGCT TCA GGCG TTTTTGCCATTTGTG TERM 1981 1644729 - 1644740 + g 74 -2.2 -5.08824 | gap 1 TCGATGCACGGGTCA GCAGG GCA CC-GC TTTTTTCCATGGCGA TERM 1982 1645165 - 1645144 - R 100 -15.9 -5.74086 | opp_overlap 1645139 1645138 AAAGTAAACAAAAAA GCGCCCTAC AACC GTAGGGCGC TTGAACTATTTTCTT Shewmr7_1421 1647179 - 1645206 - | hypothetical protein TERM 1983 1645263 - 1645293 + g 75 -10.4 -3.36968 | opp_overlap 1645268 GCTACCAGGGTTATG GCAAACGGCGCAAG ATT CTTGGGTCGTTAGC TTGTACCATTCAGTA Shewmr7_1422 1647718 - 1648296 + | thymidine kinase TERM 1984 1650047 - 1650025 - g 78 -4.1 -5.14563 | gap 1 CCCTCTATGAAAAAA CCG-AGACGG CTAA CCGTGTGCGG GTGCAAACCGACAGT TERM 1985 1650997 - 1650983 - g 70 -2.7 -4.84017 | overlap 1650970 AACGCGGCATAAAAA CGCGC GTGAT GTGCG GGTACAGGTAATGCT Shewmr7_1423 1648584 - 1651652 + | hypothetical protein TERM 1986 1651775 - 1651748 - T 100 -9.1 -4.83243 | gap 1, opp_overlap 1651748 TCTATATAAAACAAA CCCCGC-AGCCG AGTTA CGGTTTGCGGGG TTTTTATTGGCACCG TERM 1987 1651748 - 1651775 + T 100 -11.3 -5.06414 | gap 1, opp_overlap 1651748 TCTATATAAAACAAA CCCCGC-AGCCG AGTTA CGGTTTGCGGGG TTTTTATTGGCACCG Shewmr7_1424 1653442 - 1652063 - | two component, sigma54 specific, Fis family transcriptional regulator Shewmr7_1425 1655250 - 1653439 - | periplasmic sensor signal transduction histidine kinase TERM 1988 1655095 - 1655109 + g 70 -2.1 -4.99861 | ATCGAGGAAGCTAAC CAGCT CTTTA AGTTG TTTTTCTGATTGCTG TERM 1989 1655305 - 1655286 - R 100 -13.6 -4.88795 | opp_overlap 1655290 ACTGAATAAAACAAA GCGAGCCT GAGT AGGCTCGC TTAAAAACTATCTAG TERM 1990 1655347 - 1655323 - R 100 -13.1 -3.42726 | opp_overlap 1655322 1655321, overlap 1655327 AAAAACTATCTAGAA TCAAGGAATAA TCC TTATTCCTTGA GATTAATATCCGTTG Shewmr7_1426 1656747 - 1655350 - | TRAP dicarboxylate transporter, DctM subunit TERM 1991 1655825 - 1655852 + g 73 -6.2 -4.59089 | overlap 1655834 AGCATGATGCTGACT TTTGCCCCGTCG CGCA CCACGTGGCGAA TTTCTTTGTCGATTG Shewmr7_1427 1657391 - 1656747 - | tripartite ATP-independent periplasmic transporter DctQ TERM 1992 1657446 - 1657414 - R 76 -9.2 -3.53012 | opp_overlap 1657416 1657433, overlap 1657416 1657433 CTCCCCTCGCTCAAA TACCGCTTAACCCC AAATA GAGATTAAGCGGTT AATTTCATTATTGTT TERM 1993 1657444 - 1657416 - R 89 -11.8 -3.34398 | opp_overlap 1657416 1657433, overlap 1657414 1657433 CCCCTCGCTCAAATA CCGCTTAACCCC AAATA GAGATTAAGCGG TTAATTTCATTATTG Shewmr7_1428 1658476 - 1657454 - | TRAP dicarboxylate transporter, DctP subunit Shewmr7_1429 1659101 - 1658871 - | hypothetical protein TERM 1994 1660854 - 1660874 + G 76 -5.3 -4.81863 | CTGCCGTGACTTGCC GGCGCGTGA CAC TGACGAGCC TTTTGTTGTGCGTTT TERM 1995 1661388 - 1661371 - g 70 -4.9 -4.74706 | opp_overlap 1661374, overlap 1661372 TTTAATACCGAAAAA CTGGTTT GGTT AAACCAA CACTATATTAAGACG Shewmr7_1430 1660468 - 1661877 + | glutamyl-tRNA synthetase TERM 1996 1663582 - 1663595 + T 100 -8.1 -5.76633 | opp_overlap 1663582 1663581 GTTGAGAACAATAAG CCACC TTTA GGTGG TTTTTTTGTATCTAA TERM 1997 1664008 - 1663992 - T 100 -9.4 -5.34381 | opp_overlap 1663992 AAAGCCAAATAAAAA GGCGAC TCGAG GTCGCC TTCTACATCCAAACT TERM 1998 1663992 - 1664008 + T 76 -10.1 -3.35798 | opp_overlap 1663992 AAAGCCAAATAAAAA GGCGACT CGA GGTCGCC TTCTACATCCAAACT Shewmr7_1431 1665906 - 1664077 - | ABC transporter related Shewmr7_1432 1666089 - 1667717 + | DNA-3-methyladenine glycosylase II / transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase Shewmr7_1433 1667837 - 1668403 + | methylated-DNA--protein-cysteine methyltransferase Shewmr7_1434 1668441 - 1669724 + | DEAD/DEAH box helicase domain-containing protein TERM 1999 1669949 - 1669971 + G 76 -7 -4.57837 | AGTTTTAAGCACCAC GGACTGCGTT ATG AATGCATTCC TTTTTCCCGCAATGT Shewmr7_1435 1669790 - 1670260 + | dual specificity protein phosphatase TERM 2000 1670854 - 1670868 + G 74 -7.8 -4.22369 | opp_overlap 1670853, overlap 1670851 ACCGAGCGTAATTAC CGTGGC CTT GCCATG TTGTTTGGTTTTAGT TERM 2001 1671770 - 1671760 - g 82 -6.8 -4.76644 | opp_overlap 1671760 AATATTGAGGAAAAA CTGG CGA CCAG TACTTATCGACTCGC Shewmr7_1436 1670296 - 1671918 + | phospholipase D/transphosphatidylase TERM 2002 1672276 - 1672291 + G 70 -3.2 -4.7497 | CATTACCGATTGCCA GCGGAT GATT ATCGGC TTTTTGGTGCGTGCA Shewmr7_1437 1672010 - 1672909 + | response regulator receiver modulated CheW protein Shewmr7_1438 1673080 - 1674306 + | serine/threonine transporter SstT TERM 2003 1674344 - 1674363 + F 100 -10 -5.61596 | opp_overlap 1674344 1674342 AAAAGTATCATAAGA GCAGTCAC CTCG GTGGCTGC TTTTTTTATGGGAGT Shewmr7_1439 1674383 - 1674907 + | hypothetical protein TERM 2004 1674915 - 1674935 + T 100 -15.5 -2.99947 | opp_overlap 1674915 GTTATTAAACTAAAA GGGACAAGC ACG GCTTGTCCC TCTGTCTAAACATTC TERM 2005 1674935 - 1674915 - T 100 -15.5 -4.58773 | opp_overlap 1674915 GTTATTAAACTAAAA GGGACAAGC ACG GCTTGTCCC TCTGTCTAAACATTC Shewmr7_1440 1676344 - 1674965 - | twin-arginine translocation pathway signal Shewmr7_1441 1676680 - 1677114 + | hypothetical protein TERM 2006 1677172 - 1677202 + T 71 -4.6 -4.59853 | opp_overlap 1677176, overlap 1677174 1677176 CAAGCCGATTGGCTA AAAACGAGGTCTCT TAA GGCGACCTCGTGTC TTTTTAGGGCCTTAG TERM 2007 1677174 - 1677200 + T 72 -7.2 -3.91164 | opp_overlap 1677176, overlap 1677172 1677176 AGCCGATTGGCTAAA AACGAGGTCTCT TAA GGCGACCTCGTG TCTTTTTAGGGCCTT TERM 2008 1677176 - 1677198 + T 78 -9.8 -3.53855 | opp_overlap 1677176, overlap 1677174 1677172 CCGATTGGCTAAAAA CGAGGTCTCT TAA GGCGACCTCG TGTCTTTTTAGGGCC TERM 2009 1677198 - 1677176 - T 100 -9.1 -4.58395 | opp_overlap 1677176 1677174 1677172 CCGATTGGCTAAAAA CGAGGTCTC TTAAG GCGACCTCG TGTCTTTTTAGGGCC Shewmr7_1442 1677911 - 1677240 - | pseudouridylate synthase Shewmr7_1443 1678572 - 1678018 - | redoxin domain-containing protein Shewmr7_1444 1679303 - 1678677 - | hypothetical protein Shewmr7_1445 1679486 - 1679689 + | hypothetical protein TERM 2010 1680287 - 1680263 - g 71 -5.5 -4.48987 | overlap 1680265 CGTGTATAACCAAAA CCCCGGAGCGG TTG CCGCGCCAACG GCGGGATTACACTTT Shewmr7_1446 1679754 - 1680791 + | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase TERM 2011 1680812 - 1680840 + F 86 -5.9 -5.40072 | opp_overlap 1680812 1680814 1680815, overlap 1680815 GATTTTGTTTTAAAA TAGCCGCCCACAT TGA GTTTGGGCGGTAA TTTTTTTCAGCCAAA TERM 2012 1680815 - 1680837 + F 78 -9.8 -3.49966 | opp_overlap 1680815 1680814 1680812, overlap 1680812 TTTGTTTTAAAATAG CCGCCCACAT TGA GTTTGGGCGG TAATTTTTTTCAGCC TERM 2013 1680912 - 1680901 - f 73 -5.8 -4.41494 | TATTGTTAATCAAAA TGGC GCTT GCCA TTACAAATGTAGTCA tgt 1680953 - 1682077 + | queuine tRNA-ribosyltransferase Shewmr7_1448 1682161 - 1682436 + | protein translocase subunit yajC TERM 2014 1682673 - 1682705 + G 74 -11.4 -3.14132 | opp_overlap 1682668 1682669 CTTGAAAAAGGTCAA TTGTTGGTTCGCGT ACAAA ACGCGGATCAACAG TTGCTGGCCAAGGAA secD 1682454 - 1684304 + | preprotein translocase subunit SecD secF 1684317 - 1685264 + | preprotein translocase subunit SecF TERM 2015 1685284 - 1685298 + F 73 -10 -3.01712 | GTATTGAGACTCGAG GTCGTG TAT CACGAC TGTTCAAAAAACAGC TERM 2016 1685330 - 1685310 - f 86 -6.8 -5.02074 | opp_overlap 1685312, overlap 1685312 CGACTGTTCAAAAAA CAGCCACC GTTAA GGTGGCTT TTTTATAGGTGAATT TERM 2017 1685312 - 1685328 + F 100 -9.4 -5.28176 | opp_overlap 1685312 1685310 ACTGTTCAAAAAACA GCCACC GTTAA GGTGGC TTTTTTATAGGTGAA TERM 2018 1685328 - 1685312 - f 85 -9.4 -4.13963 | opp_overlap 1685312, overlap 1685310 ACTGTTCAAAAAACA GCCACC GTTAA GGTGGC TTTTTTATAGGTGAA Shewmr7_1451 1685521 - 1685838 + | hypothetical protein Shewmr7_1452 1686126 - 1686485 + | rhodanese domain-containing protein TERM 2019 1686904 - 1686922 + G 77 -10.2 -3.53343 | overlap 1686906 GGTGGCGATCAGCAC TGCGGGCG CAG CGCCCGTG TTTGCGCGCACCATT TERM 2020 1686906 - 1686920 + G 82 -12.8 -3.34398 | overlap 1686904 TGGCGATCAGCACTG CGGGCG CAG CGCCCG TGTTTGCGCGCACCA Shewmr7_1453 1686521 - 1687432 + | siroheme synthase TERM 2021 1687459 - 1687489 + F 100 -16.3 -5.37345 | GCAGTTTGTTTGAGC TGACGGCGAGTCT TAGGT AGACTCGCCGTTA TTTTTTATCGTTAAG Shewmr7_1454 1687518 - 1688063 + | YaeQ family protein TERM 2022 1688095 - 1688061 - T 100 -13.9 -3.3062 | gap 1, opp_overlap 1688068, overlap 1688068 CTGAAAGATGACCAA TAAA-AAAGAGCCTGC AATT GCAGGCTCTTTGTTTA GACGAACATTATTGG TERM 2023 1688068 - 1688087 + T 100 -13.6 -4.41348 | opp_overlap 1688061 1688068 ATGACCAATAAAAAA GAGCCTGC AATT GCAGGCTC TTTGTTTAGACGAAC TERM 2024 1688087 - 1688068 - T 100 -13.6 -5.52023 | opp_overlap 1688068, overlap 1688061 ATGACCAATAAAAAA GAGCCTGC AATT GCAGGCTC TTTGTTTAGACGAAC Shewmr7_1455 1690521 - 1688104 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 2025 1690348 - 1690360 + g 70 -3.3 -4.81249 | TTCTGACATCAGGGC TGGCG CAT CGGCA TTTTTAAATTTAACG TERM 2026 1690963 - 1690976 + r 74 -6.7 -4.26953 | overlap 1690972 TTTGGTGTCGGCAGT TTGGC ATTT GCCAA TTTATTGGCTTAATT TERM 2027 1691063 - 1691076 + r 100 -9.5 -4.7497 | opp_overlap 1691063 AACAATATGCAAAAA GCGCC ATTT GGCGC TTTTTAGTCCGTCAG TERM 2028 1691076 - 1691063 - R 100 -9.5 -4.77216 | opp_overlap 1691063 AACAATATGCAAAAA GCGCC ATTT GGCGC TTTTTAGTCCGTCAG Shewmr7_1456 1691502 - 1691104 - | rhodanese domain-containing protein Shewmr7_1457 1691740 - 1691528 - | hypothetical protein Shewmr7_1458 1695030 - 1691782 - | acriflavin resistance protein TERM 2029 1692987 - 1693021 + g 70 -2.9 -4.82901 | gap 2, overlap 1692988 1692991 ATTCTTCACGGACCG ACAGCGCAATGCTGTGA CTG TCAC-GC-TTGCGATGC TTTTTATCGACAAGA Shewmr7_1459 1696079 - 1695066 - | RND family efflux transporter MFP subunit Shewmr7_1460 1696976 - 1696260 - | hypothetical protein TERM 2030 1696886 - 1696900 + g 77 -9.2 -3.97947 | opp_overlap 1696886 CTTTCATCTCTAACA GCGCCG AGC TGGCGC TTTGTCCTACATAGA Shewmr7_1461 1697517 - 1697131 - | hypothetical protein TERM 2031 1697412 - 1697401 - G 76 -7.2 -4.37092 | opp_overlap 1697402, overlap 1697402 ATCGTTGTGATAAAA GGCG GCGC CGCC CCAGTTTTCAATTGG TERM 2032 1697609 - 1697571 - R 95 -12.7 -3.28906 | gap 1, opp_overlap 1697582, overlap 1697573 1697575 1697582 GCAATAAATACGTAA GA-TACAAAAAAGCCGCA AAAA TGCGGCTTTTTTGTGCTC GAAACAGCTTAGAAC TERM 2033 1697606 - 1697573 - R 100 -15.5 -3.19874 | opp_overlap 1697582, overlap 1697571 1697575 1697582 AATAAATACGTAAGA TACAAAAAAGCCGCA AAAA TGCGGCTTTTTTGTG CTCGAAACAGCTTAG TERM 2034 1697604 - 1697575 - R 100 -18.1 -3.14671 | opp_overlap 1697582, overlap 1697573 1697571 1697582 TAAATACGTAAGATA CAAAAAAGCCGCA AAAA TGCGGCTTTTTTG TGCTCGAAACAGCTT TERM 2035 1697582 - 1697597 + r 100 -10.4 -5.31275 | opp_overlap 1697575 1697573 1697571 1697582 GTAAGATACAAAAAA GCCGCA AAAA TGCGGC TTTTTTGTGCTCGAA TERM 2036 1697597 - 1697582 - R 100 -10.4 -5.47431 | opp_overlap 1697582, overlap 1697575 1697573 1697571 GTAAGATACAAAAAA GCCGCA AAAA TGCGGC TTTTTTGTGCTCGAA Shewmr7_1462 1698913 - 1697618 - | membrane protein involved in aromatic hydrocarbon degradation TERM 2037 1697669 - 1697699 + g 71 -6.8 -4.1899 | overlap 1697671 1697672 ACCGCTTGATTCAGT TACCGCGTTCACAG GGC CTGTGATTGCGCTG TTTTCGATCAGGTGA TERM 2038 1699233 - 1699198 - R 100 -15 -4.07537 | opp_overlap 1699208, overlap 1699199 1699208 AAGAAATTTAAACAA TTTGTAAAAAGCGTAC ACAT GTACGCTTTTTACAAT CATAGGCAGAAAATT TERM 2039 1699232 - 1699199 - R 100 -18.5 -3.02895 | opp_overlap 1699208, overlap 1699198 1699208 AGAAATTTAAACAAT TTGTAAAAAGCGTAC ACAT GTACGCTTTTTACAA TCATAGGCAGAAAAT TERM 2040 1699223 - 1699208 - R 100 -9 -4.64144 | opp_overlap 1699208, overlap 1699199 1699198 AACAATTTGTAAAAA GCGTAC ACAT GTACGC TTTTTACAATCATAG TERM 2041 1699208 - 1699223 + r 100 -9 -4.63527 | opp_overlap 1699208 1699199 1699198 AACAATTTGTAAAAA GCGTAC ACAT GTACGC TTTTTACAATCATAG Shewmr7_1463 1700705 - 1699254 - | sodium/proline symporter TERM 2042 1700802 - 1700836 + r 87 -8.5 -4.42619 | opp_overlap 1700801 1700802, overlap 1700803 AGATGTGATCGAAAT CCGACCTCCGAGCAT GAGAA AAGATCGGAGGTCGA TTTTATAAAATATTA TERM 2043 1700836 - 1700802 - R 77 -10.7 -2.79505 | opp_overlap 1700802 1700803, overlap 1700801 AGATGTGATCGAAAT CCGACCTCCGAGCAT GAGAA AAGATCGGAGGTCGA TTTTATAAAATATTA TERM 2044 1700803 - 1700835 + r 89 -12 -3.24848 | opp_overlap 1700802 1700801, overlap 1700802 GATGTGATCGAAATC CGACCTCCGAGCAT GAGAA AAGATCGGAGGTCG ATTTTATAAAATATT Shewmr7_1464 1701568 - 1700864 - | hypothetical protein TERM 2045 1701350 - 1701335 - G 73 -5.4 -4.72986 | gap 1, opp_overlap 1701335 1701333 1701329 1701325, overlap 1701337 CATGGCCACTAAAAA GC-CCGT TTG ACGGCGC TGTTTATGGTGTTGC Shewmr7_1465 1702124 - 1701561 - | RNA polymerase sigma factor Shewmr7_1466 1703866 - 1702205 - | hypothetical protein Shewmr7_1467 1705923 - 1703860 - | TPR repeat-containing protein Shewmr7_1468 1706939 - 1705923 - | von Willebrand factor, type A TERM 2046 1706695 - 1706726 + g 76 -11.6 -3.28791 | ATTAGATCCCGCCCT TGGCTTGGCAGTTC AATC GGATCGCCAAGCCA TTGTGGACGGGCGAT Shewmr7_1469 1707526 - 1706933 - | hypothetical protein Shewmr7_1470 1708558 - 1707590 - | hypothetical protein TERM 2047 1708523 - 1708496 - G 70 -9.2 -3.53224 | opp_overlap 1708499, overlap 1708499 CAGCCCGTCGGCAAA CAATGGCAAGCC ATGT GGATTGCCATTA CTGTGTTGGGTTGCG TERM 2048 1708520 - 1708499 - G 75 -8.7 -3.90744 | opp_overlap 1708499, overlap 1708496 CCCGTCGGCAAACAA TGGCAAGCC ATGT GGATTGCCA TTACTGTGTTGGGTT Shewmr7_1471 1709587 - 1708631 - | ATPase fadI 1709861 - 1711171 + | 3-ketoacyl-CoA thiolase TERM 2049 1712589 - 1712576 - g 71 -6.7 -4.13767 | opp_overlap 1712575 TTGCCCATGCGAAAA CGTCT CCTG AGACG ATTGCTACCACAGTG fadJ 1711177 - 1713306 + | multifunctional fatty acid oxidation complex subunit alpha TERM 2050 1713326 - 1713357 + F 77 -10.3 -3.12999 | opp_overlap 1713333, overlap 1713333 TAAATATATCATGGT CAAAAAAGCGGCA ATTCGA TGCCGCTTTTTTA TTGCCTCTAGGCTAA TERM 2051 1713350 - 1713333 - f 100 -8.4 -5.03715 | opp_overlap 1713333 1713326 ATCATGGTCAAAAAA GCGGCA ATTCGA TGCCGC TTTTTTATTGCCTCT TERM 2052 1713333 - 1713350 + F 100 -8.4 -5.49234 | opp_overlap 1713333, overlap 1713326 ATCATGGTCAAAAAA GCGGCA ATTCGA TGCCGC TTTTTTATTGCCTCT Shewmr7_1474 1713518 - 1713778 + | hypothetical protein TERM 2053 1713845 - 1713801 - T 100 -19.8 -3.5393 | gap 1, opp_overlap 1713817, overlap 1713806 1713817 ATGATTTTTCTTAAA TATGACCAATAAAAAAGGAGC ATTA GCTCCTTTTTTATTGG-CATA GGCCGAGCGCTAGCA TERM 2054 1713841 - 1713806 - T 100 -20.8 -2.84325 | opp_overlap 1713817, overlap 1713801 1713817 TTTTCTTAAATATGA CCAATAAAAAAGGAGC ATTA GCTCCTTTTTTATTGG CATAGGCCGAGCGCT TERM 2055 1713817 - 1713830 + T 100 -8.1 -5.46657 | opp_overlap 1713817 1713806 1713801 ATGACCAATAAAAAA GGAGC ATTA GCTCC TTTTTTATTGGCATA TERM 2056 1713830 - 1713817 - T 100 -8.1 -5.52023 | opp_overlap 1713817, overlap 1713806 1713801 ATGACCAATAAAAAA GGAGC ATTA GCTCC TTTTTTATTGGCATA Shewmr7_1475 1714713 - 1714051 - | hypothetical protein Shewmr7_1476 1719069 - 1714777 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 2057 1717263 - 1717274 + g 74 -4.4 -4.88407 | opp_overlap 1717263, overlap 1717258 TGAAAACTAGGAAAT CAGA TATT TCTG TTTTGTTGATTTCTT TERM 2058 1718041 - 1718059 + g 78 -2.5 -5.26316 | gap 1, opp_overlap 1718043, overlap 1718041 1718043 TTCAGATTCAGATGA TACA-AGG AAAC CCTGTGTA TTTTTTGTAAGATGC TERM 2059 1719206 - 1719216 + r 71 -4 -4.82901 | GAGGATTGACCGCGT TTTG CAT CAAA TTTTTATACAAAGAC Shewmr7_1477 1722110 - 1719321 - | peptidase M16 domain-containing protein TERM 2060 1721921 - 1721910 - G 73 -5.8 -4.56597 | TTCTGTGCCTAAAAA GAGC ATAT GCTC TAAAAAATGCGCCAT Shewmr7_1478 1722280 - 1722750 + | phosphohistidine phosphatase, SixA TERM 2061 1722792 - 1722765 - T 100 -14.2 -4.40358 | opp_overlap 1722765 1722769, overlap 1722769 ATTCATTCGATAAAA CAAAGGGCTCAC ATTA GTGGGCCCTTTG TTTTTTAGAGGATAA TERM 2062 1722765 - 1722792 + T 100 -16.4 -5.02074 | opp_overlap 1722765 1722769, overlap 1722769 ATTCATTCGATAAAA CAAAGGGCTCAC ATTA GTGGGCCCTTTG TTTTTTAGAGGATAA TERM 2063 1722788 - 1722769 - T 100 -9.2 -4.77775 | opp_overlap 1722765 1722769, overlap 1722765 ATTCGATAAAACAAA GGGCTCAC ATTA GTGGGCCC TTTGTTTTTTAGAGG TERM 2064 1722769 - 1722788 + T 100 -11.4 -5.04249 | opp_overlap 1722769 1722765, overlap 1722765 ATTCGATAAAACAAA GGGCTCAC ATTA GTGGGCCC TTTGTTTTTTAGAGG Shewmr7_1479 1723410 - 1722817 - | hypothetical protein Shewmr7_1480 1723428 - 1724372 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 2065 1724400 - 1724441 + F 86 -11.7 -3.30159 | gap 1, opp_overlap 1724394, overlap 1724401 CATAAATTAGGTTGA GTC-TTTTCCCGCTGCCAGT TAG GCTTGCAGCGGGAAAAAGAA TTGTCCAGCCATTGC TERM 2066 1724401 - 1724440 + F 100 -15.2 -2.57881 | gap 1, opp_overlap 1724394, overlap 1724400 ATAAATTAGGTTGAG TC-TTTTCCCGCTGCCAGT TAG GCTTGCAGCGGGAAAAAGA ATTGTCCAGCCATTG TERM 2067 1725464 - 1725452 - g 73 -9.1 -3.737 | opp_overlap 1725434 GAAGTGGTGACTAAA GGTCG TCA CGACC CCTGTGTCGGGATCC Shewmr7_1481 1724501 - 1725595 + | chorismate synthase TERM 2068 1725678 - 1725714 + G 85 -7.3 -4.86954 | gap 1, opp_overlap 1725675 1725687, overlap 1725680 1725681 TAATGCCAACAATCT CTAGCACA-AGCCAGC AGTTAC GCTGGCTATGTGCCTG TTATTTTTTCTTCTT TERM 2069 1725680 - 1725712 + G 74 -8.5 -4.00001 | gap 1, opp_overlap 1725675 1725687, overlap 1725678 1725681 ATGCCAACAATCTCT AGCACA-AGCCAGC AGTTAC GCTGGCTATGTGCC TGTTATTTTTTCTTC TERM 2070 1725681 - 1725711 + G 76 -12 -2.9756 | gap 1, opp_overlap 1725675 1725687, overlap 1725680 1725678 TGCCAACAATCTCTA GCACA-AGCCAGC AGTTAC GCTGGCTATGTGC CTGTTATTTTTTCTT Shewmr7_1482 1725665 - 1726834 + | major facilitator transporter Shewmr7_1483 1726900 - 1728042 + | ATP-NAD/AcoX kinase Shewmr7_1484 1728098 - 1728379 + | hypothetical protein Shewmr7_1485 1728383 - 1728991 + | tRNA/rRNA methyltransferase (SpoU) TERM 2071 1729027 - 1729060 + T 100 -13.5 -4.07687 | gap 1, opp_overlap 1729027 1729033, overlap 1729033 TGCTCAGTCGAAATA CA-AAAAGGATTAAGC ACT GCTTAATCCTTTTCTG TTTTGAGCAGCCAAT TERM 2072 1729060 - 1729027 - T 100 -13.5 -3.38046 | gap 1, opp_overlap 1729027 1729033, overlap 1729033 TGCTCAGTCGAAATA CA-AAAAGGATTAAGC ACT GCTTAATCCTTTTCTG TTTTGAGCAGCCAAT TERM 2073 1729053 - 1729033 - T 100 -12.7 -5.19879 | opp_overlap 1729027 1729033, overlap 1729027 GTCGAAATACAAAAA GGATTAAGC ACT GCTTAATCC TTTTCTGTTTTGAGC TERM 2074 1729033 - 1729053 + T 100 -12.7 -4.89567 | opp_overlap 1729033 1729027, overlap 1729027 GTCGAAATACAAAAA GGATTAAGC ACT GCTTAATCC TTTTCTGTTTTGAGC Shewmr7_1486 1731142 - 1729202 - | FAD dependent oxidoreductase TERM 2075 1730789 - 1730776 - G 76 -8.1 -4.12942 | overlap 1730767 CCAAATGCGGTAAAA CCAGC CATT GCTGG ATAAGATGAGCAGGG Shewmr7_1487 1731428 - 1732663 + | 3-oxoacyl-[acyl-carrier-protein] synthase I TERM 2076 1732700 - 1732685 - f 100 -9 -5.00884 | opp_overlap 1732685 ATTTTCGTTAAAAAA GGAAGC TTAG GCTTCC TTTTTTATTGGCAGA TERM 2077 1732685 - 1732700 + F 100 -9 -5.4505 | opp_overlap 1732685 ATTTTCGTTAAAAAA GGAAGC TTAG GCTTCC TTTTTTATTGGCAGA Shewmr7_1488 1732814 - 1733944 + | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region TERM 2078 1734622 - 1734590 - g 76 -6.3 -4.61162 | opp_overlap 1734596, overlap 1734591 1734596 1734618 ACACCAAAGAAGAAA TGAAAATGGTCTGGG AAA CCCAGAAGATTTTCG GTGATGACGAAATCC TERM 2079 1734621 - 1734591 - g 72 -9.8 -3.35071 | opp_overlap 1734596, overlap 1734590 1734596 1734618 CACCAAAGAAGAAAT GAAAATGGTCTGGG AAA CCCAGAAGATTTTC GGTGATGACGAAATC Shewmr7_1489 1733947 - 1734963 + | aspartate semialdehyde dehydrogenase TERM 2080 1735012 - 1734996 - f 100 -12.3 -4.86621 | opp_overlap 1734996 ATGCCCAATGAAAAA GCCTGCT GCC AGCAGGC TTTTTTTGTTTTACA TERM 2081 1734996 - 1735012 + F 100 -12.3 -6.09196 | opp_overlap 1734996 ATGCCCAATGAAAAA GCCTGCT GCC AGCAGGC TTTTTTTGTTTTACA TERM 2082 1735659 - 1735635 - g 74 -10 -3.63627 | GTCGCACAGCCTAAA CCTAAGGTGG AGACG CCACCTAAGG CCGAGGTGAAGCCCG Shewmr7_1490 1735143 - 1738517 + | hypothetical protein TERM 2083 1738561 - 1738545 - f 81 -10.8 -3.27022 | opp_overlap 1738545 TTGATTTCACACTAA CGGCGC GCAGA GCGCCG TTTTTTTTATGGGCT TERM 2084 1738545 - 1738561 + F 100 -10.8 -5.94713 | opp_overlap 1738545 TTGATTTCACACTAA CGGCGC GCAGA GCGCCG TTTTTTTTATGGGCT Shewmr7_1491 1738621 - 1739406 + | tRNA pseudouridine synthase A Shewmr7_1492 1739458 - 1740756 + | FolC bifunctional protein TERM 2085 1740795 - 1740809 + G 85 -7.8 -4.83615 | GCACTGTGGTGCTGG TCGCCC TCG GGGTGA TTTTTCTGCCGGATA TERM 2086 1741150 - 1741140 - g 70 -2.4 -5.05153 | overlap 1741148 AGCCTAAAAAAGAAA CGCC AAA GCCG ACTCCAGTGAAAACT Shewmr7_1493 1740749 - 1741546 + | sporulation domain-containing protein TERM 2087 1741835 - 1741858 + G 71 -5.4 -4.5448 | gap 1, overlap 1741838 TGAACGATGAGGTGC TACGCAATGGG GTC TCCATTGC-TA TTCTTTTTATCACTA TERM 2088 1741838 - 1741856 + G 78 -9.6 -3.86816 | overlap 1741835 ACGATGAGGTGCTAC GCAATGGG GTC TCCATTGC TATTCTTTTTATCAC TERM 2089 1741977 - 1742007 + G 100 -8.2 -5.28778 | overlap 1741979 1741982 GTGTTTCGGTGCCAT TAGGGGCGCACTGA TCG TCAGCGCGCTGCTG TTTTTTATGGATGCT TERM 2090 1741979 - 1742005 + G 76 -8.6 -4.2748 | overlap 1741977 1741982 GTTTCGGTGCCATTA GGGGCGCACTGA TCG TCAGCGCGCTGC TGTTTTTTATGGATG TERM 2091 1741982 - 1742002 + G 74 -11.1 -3.12257 | overlap 1741979 1741977 TCGGTGCCATTAGGG GCGCACTGA TCG TCAGCGCGC TGCTGTTTTTTATGG Shewmr7_1494 1741657 - 1742145 + | colicin V production protein TERM 2092 1743198 - 1743188 - g 73 -5.4 -4.71318 | opp_overlap 1743188 AAGATCAAAAAAGAA TGGT ACG ACCA TGATATCGACGTGGT Shewmr7_1495 1742327 - 1743841 + | amidophosphoribosyltransferase TERM 2093 1743913 - 1743932 + T 100 -12.2 -5.83211 | opp_overlap 1743913 AACGCCAAATAAAAA GCCAGTGA TGAG TCACTGGC TTTTTTGTTTTGATA TERM 2094 1743932 - 1743913 - T 100 -12.2 -5.29846 | opp_overlap 1743913 AACGCCAAATAAAAA GCCAGTGA TGAG TCACTGGC TTTTTTGTTTTGATA Shewmr7_1496 1745443 - 1743956 - | amino acid carrier protein TERM 2095 1743999 - 1744013 + g 70 -4.2 -4.62069 | TGATTGAGAGCCGTT TGCTCA TCC TGCGCA TTTTTACGCTCAACC Shewmr7_1497 1746093 - 1745806 - | hypothetical protein TERM 2096 1746136 - 1746162 + H 76 -9.6 -3.56594 | GCAAGGGATTTTAGT TTTAGATGAGAA TAA TTCTCAACTAAA TTTACACAGCTTTAG TERM 2097 1746554 - 1746538 - g 76 -11.5 -3.28497 | overlap 1746520 GCAGCTTAAACCTAA GGCCGCG ACC CGCAGCC AACTCACAGTACTTA Shewmr7_1498 1746230 - 1748428 + | DNA topoisomerase III TERM 2098 1748604 - 1748626 + T 100 -10.7 -5.40072 | TGACTATGTTTGTCA TGCACTCAA CCCCA TTGAGTGCA TTTTTTTAGGCAAAA TERM 2099 1748670 - 1748648 - T 100 -7 -6.38039 | opp_overlap 1748650 TAGGCAAAAAAAAAA GAGTAAGCCA ATA CGGATTACTC TTACGGAAATTGGTC Shewmr7_1499 1750063 - 1748774 - | prolyl aminopeptidase 2 Shewmr7_1500 1750243 - 1750887 + | beta-lactamase domain-containing protein TERM 2100 1752085 - 1752096 + G 70 -3 -4.76087 | GGTGAAATCGTCAAT CAAA TCAA TTTG TTTATTTCTTCTCTC Shewmr7_1501 1751221 - 1752960 + | methyl-accepting chemotaxis sensory transducer Shewmr7_1502 1753193 - 1754206 + | hypothetical protein TERM 2101 1754526 - 1754540 + F 71 -9.2 -2.98823 | GGGTTTGTCATCGTC GCTGCG AGC CGCGGC TATCTATGCAAAAGC TERM 2102 1755052 - 1755070 + G 75 -10.2 -3.34236 | CTAAATATGGCTGCG GCGCCGGA CTC TGCGGCGC TTGTACCGTGCATTT Shewmr7_1504 1754886 - 1755383 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Shewmr7_1505 1755385 - 1757631 + | twin-arginine translocation pathway signal TERM 2103 1757656 - 1757684 + F 70 -7.5 -3.83561 | opp_overlap 1757663, overlap 1757656 1757663 CGACACCTGAGTGAG CAAAAAAGCGCCT AAT AAGCGCTTTTTTC GTTTTTTTACCACAA TERM 2104 1757656 - 1757685 + F 91 -7.3 -5.40072 | gap 1, opp_overlap 1757663, overlap 1757656 1757663 CGACACCTGAGTGAG C-AAAAAAGCGCCT AAT AAGCGCTTTTTTCG TTTTTTTACCACAAA TERM 2105 1757663 - 1757677 + F 95 -5.6 -5.62552 | opp_overlap 1757663, overlap 1757656 1757656 TGAGTGAGCAAAAAA GCGCCT AAT AAGCGC TTTTTTCGTTTTTTT TERM 2106 1757677 - 1757663 - f 95 -7.8 -5.1675 | opp_overlap 1757663 1757656 1757656 TGAGTGAGCAAAAAA GCGCCT AAT AAGCGC TTTTTTCGTTTTTTT TERM 2107 1757718 - 1757705 - f 73 -5.3 -4.59342 | opp_overlap 1757705 TTTACCACAAATAAA TTGCT TGTT AGCAA ATTTACGGGCATTAA Shewmr7_1506 1758002 - 1758493 + | hypothetical protein TERM 2108 1759306 - 1759322 + G 82 -7.3 -4.63184 | opp_overlap 1759306 GCAGTGGCGAGTTAA TTGGTGC CCA GCATCAA TTTTTAGACTCGGTT Shewmr7_1507 1758609 - 1760063 + | methyl-accepting chemotaxis sensory transducer TERM 2109 1760184 - 1760210 + F 100 -17.4 -5.43487 | opp_overlap 1760184 ATATCCAAATAAAAA TGGCGGTTGCAT CTA ATGCAGCCGCCA TTTTTTATGTCATTT TERM 2110 1760210 - 1760184 - f 100 -15.2 -5.31519 | opp_overlap 1760184 ATATCCAAATAAAAA TGGCGGTTGCAT CTA ATGCAGCCGCCA TTTTTTATGTCATTT Shewmr7_1508 1760484 - 1760891 + | hypothetical protein TERM 2111 1760868 - 1760880 + F 72 -6.3 -4.27316 | TATCACAATGGCAGT CTTGA TTA TCAAG TTTTGAATTAGCGGA Shewmr7_1509 1761106 - 1761663 + | GCN5-related N-acetyltransferase Shewmr7_1510 1761775 - 1762206 + | hypothetical protein TERM 2112 1762427 - 1762450 + G 74 -3.8 -4.9725 | gap 1 CCCTATTACCATTGT TG-TAGCCGCG TGG TGCGGCGAGCA TTTTTATGTGGCGAT Shewmr7_1511 1762370 - 1763347 + | hypothetical protein Shewmr7_1512 1763655 - 1764227 + | methyltransferase type 11 TERM 2113 1764643 - 1764614 - T 100 -12.3 -3.57792 | opp_overlap 1764620, overlap 1764620 GTACTCACTCTTAAA CAAAAACATCGGC CTAG GCCGATGTTTTTT CTATCGATTAAAGAA TERM 2114 1764620 - 1764637 + T 100 -11.3 -5.38951 | opp_overlap 1764614 1764620 ACTCTTAAACAAAAA CATCGGC CTAG GCCGATG TTTTTTCTATCGATT TERM 2115 1764637 - 1764620 - T 100 -11.3 -5.27938 | opp_overlap 1764620, overlap 1764614 ACTCTTAAACAAAAA CATCGGC CTAG GCCGATG TTTTTTCTATCGATT Shewmr7_1513 1765485 - 1764673 - | exonuclease III Shewmr7_1514 1765784 - 1765485 - | YciI-like protein TERM 2116 1765655 - 1765621 - G 74 -7.1 -4.29396 | gap 1 AATGAGCCACTAAAA CCCGC-ATCGCCAGGG TTTT CGCTATCGATAGCGGG GTGTGGACCCGCAAC Shewmr7_1515 1766329 - 1765784 - | intracellular septation protein A Shewmr7_1516 1767528 - 1766491 - | ferric iron reductase TERM 2117 1767339 - 1767323 - G 72 -3.5 -4.82901 | opp_overlap 1767323 1767329, overlap 1767324 1767325 TGCTGGGCATAAAAA GGGGCGC GCT GCGCCAG TCGTTGATTAAACGC TERM 2118 1767557 - 1767585 + r 80 -8.8 -3.95584 | opp_overlap 1767558, overlap 1767558 GCTTGAATTGATTAA ACTGCGGTGAAC GCTAA GCTCACCGCAGC TTTCATTGATGAACA TERM 2119 1767584 - 1767558 - R 100 -14.5 -3.794 | opp_overlap 1767558 1767557 CTTGAATTGATTAAA CTGCGGTGAAC GCTAA GCTCACCGCAG CTTTCATTGATGAAC TERM 2120 1767558 - 1767584 + r 93 -12.3 -2.97029 | opp_overlap 1767558, overlap 1767557 CTTGAATTGATTAAA CTGCGGTGAAC GCTAA GCTCACCGCAG CTTTCATTGATGAAC Shewmr7_1517 1769833 - 1767620 - | TonB-dependent siderophore receptor Shewmr7_1518 1771814 - 1769919 - | IucA/IucC family protein TERM 2121 1770324 - 1770342 + g 77 -12.4 -3.09635 | overlap 1770299 1770311 GCGCTGCACTTCTTG CGGCAGTG GTT CGCTGCCG TTGAGTACTGCGACT TERM 2122 1770607 - 1770658 + g 70 -2.9 -4.77165 | gap 2, overlap 1770634 ATGGTCATCAGGGTT TGCTG-CGGCTCAAT-GTGCGGCAG CGGA CTCTCGCGCCACAGCGCCGACAGCA TTTTCTTATAGGCGC TERM 2123 1770973 - 1770985 + g 70 -9.1 -3.53012 | opp_overlap 1770971 1770969 CCGAGATAAATGATG TCGCC ACG GGCGA TTTCGCCGGCAAAGG TERM 2124 1770988 - 1771009 + g 76 -4.3 -5.00884 | opp_overlap 1770969, overlap 1770990 TCGCCACGGGCGATT TCGCCGGCA AAGG TGCGGGCAA TTTTTTCGCGCCACT Shewmr7_1519 1772485 - 1771811 - | siderophore biosynthesis protein, putative Shewmr7_1520 1773972 - 1772485 - | L-lysine 6-monooxygenase (NADPH) TERM 2125 1773141 - 1773156 + g 72 -4 -4.86621 | gap 1, overlap 1773143 TTAACTCGGCATTGA TCCC-CT TGT AGAGGGA TTTTTGATTCGCAAT TERM 2126 1773166 - 1773183 + g 76 -5.5 -4.85599 | GAGGGATTTTTGATT CGCAATC AGGC GACTGCG TTTTTCTGGCGTCAG TERM 2127 1773477 - 1773497 + g 71 -11.1 -2.71791 | opp_overlap 1773472, overlap 1773476 CTGGCACATAGGGCG TGGTGCCCG TGC CGAGCACCA GTTTGCGGCACAAAT TERM 2128 1774527 - 1774510 - R 82 -8.5 -4.3739 | opp_overlap 1774510 GAGGGCGTCATAAAA GCCATTT GGGA AAATGGC TTTAGCGGCATTAAA TERM 2129 1774510 - 1774527 + r 71 -8.5 -3.55622 | opp_overlap 1774510 GAGGGCGTCATAAAA GCCATTT GGGA AAATGGC TTTAGCGGCATTAAA Shewmr7_1521 1774840 - 1774556 - | hypothetical protein Shewmr7_1522 1775538 - 1775095 - | hypothetical protein TERM 2130 1775563 - 1775546 - R 71 -4.1 -4.81212 | gap 1, opp_overlap 1775547 1775548, overlap 1775547 1775548 TTTACCATAACAAAA CTGCCGAT GTT ACCGGC-G TTATATTAACATCTC TERM 2131 1775716 - 1775695 - R 100 -13.1 -5.5074 | TAATGCAATAAAAAA GGCCAAATC CGCA GATTTGGCC CTGAATGATTGTATC trpA 1776583 - 1775747 - | tryptophan synthase subunit alpha Shewmr7_1524 1777779 - 1776589 - | tryptophan synthase subunit beta TERM 2132 1777854 - 1777869 + r 74 -4.7 -4.84359 | TTCAATTCTTGCTAG CCTGT ACTTGC ACAGG TTTTTATAAAAGTGG Shewmr7_1525 1779368 - 1777887 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase Shewmr7_1526 1780417 - 1779374 - | anthranilate phosphoribosyltransferase Shewmr7_1527 1781025 - 1780417 - | anthranilate synthase component II Shewmr7_1528 1782745 - 1781036 - | anthranilate synthase component I TERM 2133 1781124 - 1781139 + g 70 -8.2 -3.76492 | overlap 1781125 GCAGAAATCACCGCT TGCGCC TTTT GGCGCG TTTCATCGGCTTCAC TERM 2134 1782794 - 1782833 + H 100 -21 -3.80094 | opp_overlap 1782805, overlap 1782795 1782805 CAGACATTTTTCGCA CCAACAAAAAAGCCCGCA TTTC TGCGGGCTTTTTTGTTGA TTCTGTTACTTTCAA TERM 2135 1782795 - 1782832 + H 100 -24.5 -2.87334 | opp_overlap 1782805, overlap 1782794 1782805 AGACATTTTTCGCAC CAACAAAAAAGCCCGCA TTTC TGCGGGCTTTTTTGTTG ATTCTGTTACTTTCA TERM 2136 1782822 - 1782805 - H 100 -12.7 -5.5112 | opp_overlap 1782805 1782795 1782794 CGCACCAACAAAAAA GCCCGCA TTTC TGCGGGC TTTTTTGTTGATTCT TERM 2137 1782805 - 1782822 + H 100 -12.7 -5.57396 | opp_overlap 1782805, overlap 1782795 1782794 CGCACCAACAAAAAA GCCCGCA TTTC TGCGGGC TTTTTTGTTGATTCT TERM 2138 1783293 - 1783268 - g 71 -10.4 -3.17723 | opp_overlap 1783250 GCAGGCTTAAGTGAA GCCCGCGCCT TTAATC AAGCGCAGGC CGAACCCTTAAAACT Shewmr7_1529 1783115 - 1783975 + | phosphotransferase domain-containing protein Shewmr7_1530 1783972 - 1784592 + | translation factor SUA5 Shewmr7_1531 1784782 - 1785570 + | condensin subunit ScpA Shewmr7_1532 1785574 - 1786170 + | condensin subunit ScpB Shewmr7_1533 1786163 - 1787038 + | ribosomal large subunit pseudouridine synthase B TERM 2139 1787074 - 1787087 + T 100 -9.5 -5.42514 | opp_overlap 1787074 GTCTCTCAGTAAAAA GGCCG CTTG CGGCC TTTTTTGCTTTCTGC TERM 2140 1787087 - 1787074 - T 100 -9.5 -4.72272 | opp_overlap 1787074 GTCTCTCAGTAAAAA GGCCG CTTG CGGCC TTTTTTGCTTTCTGC TERM 2141 1787107 - 1787147 + T 100 -17.2 -3.17319 | opp_overlap 1787115 1787119, overlap 1787115 1787119 TTGCTTTCTGCGCCT GATAAAAATAAAGGGAGC ATAGG GCTCCCTTTATTCTTATC TATTAGTGCGTTAGA TERM 2142 1787115 - 1787139 + T 100 -13 -3.97645 | opp_overlap 1787115 1787119, overlap 1787107 1787119 TGCGCCTGATAAAAA TAAAGGGAGC ATAGG GCTCCCTTTA TTCTTATCTATTAGT TERM 2143 1787139 - 1787115 - T 100 -13 -4.82901 | opp_overlap 1787115 1787107 1787119, overlap 1787119 TGCGCCTGATAAAAA TAAAGGGAGC ATAGG GCTCCCTTTA TTCTTATCTATTAGT TERM 2144 1787119 - 1787135 + T 95 -9.4 -4.55997 | opp_overlap 1787115 1787119, overlap 1787115 1787107 CCTGATAAAAATAAA GGGAGC ATAGG GCTCCC TTTATTCTTATCTAT TERM 2145 1787135 - 1787119 - T 100 -9.4 -4.96501 | opp_overlap 1787119 1787115 1787107, overlap 1787115 CCTGATAAAAATAAA GGGAGC ATAGG GCTCCC TTTATTCTTATCTAT Shewmr7_1534 1787910 - 1787173 - | short chain dehydrogenase Shewmr7_1535 1788172 - 1790658 + | hypothetical protein TERM 2146 1790680 - 1790695 + F 100 -10.4 -5.61596 | opp_overlap 1790680 GTAAAATCCTAAAAA CCCAGC CTTT GCTGGG TTTTTTTATGGCGCT TERM 2147 1790695 - 1790680 - f 100 -10.4 -4.7416 | opp_overlap 1790680 GTAAAATCCTAAAAA CCCAGC CTTT GCTGGG TTTTTTTATGGCGCT TERM 2148 1791002 - 1790990 - g 70 -3.3 -4.75404 | AAAGCCTACGAAAAA CAGCT GAA AGCGG ACGAAAAGGCGAAGG Shewmr7_1536 1790771 - 1791787 + | putative periplasmic protease TERM 2149 1791812 - 1791843 + F 100 -12.4 -4.3898 | opp_overlap 1791818, overlap 1791818 TTAACTCAATCCTGA TGAAAACGCCTGCG AATA TGCAGGCGTTTTTG TTTTGTCCGAGTGAT TERM 2150 1791837 - 1791818 - f 100 -10.7 -4.2679 | opp_overlap 1791812 1791818 CAATCCTGATGAAAA CGCCTGC GAATAT GCAGGCG TTTTTGTTTTGTCCG TERM 2151 1791818 - 1791837 + F 100 -11.4 -5.54907 | opp_overlap 1791818, overlap 1791812 CAATCCTGATGAAAA CGCCTGCG AATA TGCAGGCG TTTTTGTTTTGTCCG Shewmr7_1537 1791981 - 1793000 + | AraC family transcriptional regulator TERM 2152 1793094 - 1793120 + T 100 -12.4 -3.78022 | opp_overlap 1793096 1793098 1793100 TTTGGTGCTTGAGTA GAGATACAGCCA TAT TGCCTGTATCTC TTTCCTAAGTGTAGA TERM 2153 1793118 - 1793096 - T 70 -9.2 -2.78384 | opp_overlap 1793094, overlap 1793098 1793100 TGGTGCTTGAGTAGA GATACAGCCA TAT TGCCTGTATC TCTTTCCTAAGTGTA Shewmr7_1538 1794338 - 1793154 - | hypothetical protein TERM 2154 1794059 - 1794042 - G 73 -6.3 -4.5442 | gap 1 GGCGTAATTAGAAAA CAGCT-GC GTA GCGAGCTG ATAACCAAATCCCGG TERM 2155 1794274 - 1794286 + g 71 -10.5 -3.17688 | CTTTGGCTGTCACCG CCGCC ACA GGCGG TTACTAAGGTCGTTA TERM 2156 1794394 - 1794375 - R 81 -9.3 -3.90744 | opp_overlap 1794375 1794378, overlap 1794378 TGTTGCTTGAAATAA GAAGGCC TAAGTC GGCCTTC TCTGTCTGGATGTTG TERM 2157 1794375 - 1794394 + r 71 -9.3 -3.02626 | opp_overlap 1794375 1794378, overlap 1794378 TGTTGCTTGAAATAA GAAGGCC TAAGTC GGCCTTC TCTGTCTGGATGTTG TERM 2158 1794434 - 1794461 + r 73 -8.4 -3.68222 | opp_overlap 1794433 GGAATGGTGAGCAAG TGGGTGATTGCA AGCC TGCTTTCACCCA TTGTTACCGTTAACG TERM 2159 1794489 - 1794505 + r 72 -10.1 -2.87319 | overlap 1794488 ACGCTAGTGCGAGCA GCTTGCC GCA GGCAGGC GTTTAATCCATTCGC Shewmr7_1539 1797212 - 1794477 - | hypothetical protein Shewmr7_1540 1797651 - 1800203 + | hypothetical protein TERM 2160 1800361 - 1800373 + G 83 -3.3 -5.47218 | opp_overlap 1800361 1800362, overlap 1800362 TCATCCCACACCAAA CCACC GCT GGTGA TTTTTTTGAGTGGCG Shewmr7_1541 1800211 - 1800942 + | virulence factor family protein TERM 2161 1801016 - 1801001 - T 100 -11.8 -5.34632 | opp_overlap 1801001 AATAAAACATAAAAA GGGCGC AGAT GCGCCC TTTGTTTTAGGTTGT TERM 2162 1801001 - 1801016 + T 100 -11.8 -4.73092 | opp_overlap 1801001 AATAAAACATAAAAA GGGCGC AGAT GCGCCC TTTGTTTTAGGTTGT Shewmr7_1542 1802113 - 1801046 - | hypothetical protein TERM 2163 1801172 - 1801161 - G 76 -7.2 -4.42653 | ACGTTATTCATAAAA CGGC CATA GCCG GAGTCATCACAGTCC Shewmr7_1543 1802857 - 1802258 - | arylesterase TERM 2164 1802500 - 1802510 + g 73 -5.4 -4.66609 | CGGTCAGTAGCACTT TAGC ACC GCTA TTTTTCGCTAGGGTA TERM 2165 1803363 - 1803395 + G 82 -8.4 -4.55697 | gap 1, opp_overlap 1803353 AAACAGCTATCCGGC GGCGAGCAGCAAAGG GTAG CCATTGCT-CGCGCC TTTATTTGTGAACCT Shewmr7_1544 1802910 - 1803659 + | ABC transporter related TERM 2166 1804170 - 1804180 + G 79 -8.2 -4.30978 | overlap 1804163 GAAATCAGCCGCTTA CCCG ATG CGGG TTTTAATCCATTCGC TERM 2167 1804312 - 1804300 - g 71 -6.9 -4.15044 | opp_overlap 1804299 1804300 TTGTGGGTGAAGAAA GCGCC TTA AGCGC CTTTGAAAATAGCGT TERM 2168 1804924 - 1804944 + G 76 -8.3 -4.26189 | overlap 1804937 TCGCGGCTGTGCTGC TACTGGGCG TAT TGCTCAGTA TTTTGGGCTTTGTGA Shewmr7_1545 1803663 - 1806164 + | hypothetical protein TERM 2169 1806236 - 1806255 + F 100 -7.1 -5.61596 | opp_overlap 1806236 TGATTTGTAAAAAAA GCGCTGG CCTAAA CCAGTGC TTTTTTTATGGCGAT TERM 2170 1806255 - 1806236 - f 90 -5.6 -5.42259 | opp_overlap 1806236 TGATTTGTAAAAAAA GCGCTGGC CTAA ACCAGTGC TTTTTTTATGGCGAT Shewmr7_1546 1806492 - 1807154 + | signal peptidase I TERM 2171 1807186 - 1807217 + T 86 -10.3 -3.78775 | opp_overlap 1807192 1807194, overlap 1807192 1807194 ACTCATCACGGGATA TAAAAATGGCGCC CTTATC GGCGCTATTTTTG TTTGATGATAAAGCG TERM 2172 1807192 - 1807211 + T 91 -7.1 -5.34309 | opp_overlap 1807192 1807194, overlap 1807186 1807194 CACGGGATATAAAAA TGGCGCC CTTATC GGCGCTA TTTTTGTTTGATGAT TERM 2173 1807211 - 1807192 - T 77 -4.9 -4.9792 | opp_overlap 1807186 1807192 1807194, overlap 1807194 CACGGGATATAAAAA TGGCGCC CTTATC GGCGCTA TTTTTGTTTGATGAT TERM 2174 1807194 - 1807209 + T 75 -7.5 -4.29436 | opp_overlap 1807194 1807192, overlap 1807192 1807186 CGGGATATAAAAATG GCGCC CTTATC GGCGC TATTTTTGTTTGATG Shewmr7_1547 1808464 - 1807241 - | sodium/glutamate symporter Shewmr7_1548 1809905 - 1809015 - | hypothetical protein TERM 2175 1809449 - 1809479 + g 77 -11.8 -3.15249 | TGCAGACGCGGGTTT TGGTGGCGGCTTGC AGC GCGAGTCGCTCCCA TTCCTGACAAATATC folX 1810344 - 1809976 - | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase TERM 2176 1810970 - 1810956 - g 73 -3.4 -5.00616 | overlap 1810958 TCTTTGCCGAAAAAA CTGCAC TTG GCGCTG GACGATCCGGACATG TERM 2177 1811120 - 1811132 + G 76 -3.3 -5.09204 | overlap 1811112 TTACGCGCTGCTTTG GGCGG TTA TTGCC TTTTTATTCAACTAT TERM 2178 1811435 - 1811448 + G 82 -6.7 -4.77165 | ATCCAGTAAGAGTGG TGGCT GGTT AGCCA TTTTATTATCCGACG Shewmr7_1550 1810443 - 1811549 + | hypothetical protein Shewmr7_1551 1811556 - 1812467 + | hypothetical protein Shewmr7_1552 1812822 - 1812598 - | hypothetical protein TERM 2179 1812961 - 1812984 + H 89 -6.2 -5.28983 | gap 1, overlap 1812974 1812976 AGAGATACCTTTTTG CGGCTTTTTAA GCG TTAAAAA-CCG TTTTTATCTTTTGCA Shewmr7_1553 1813143 - 1813235 + | hypothetical protein TERM 2180 1813303 - 1813322 + T 100 -10.8 -5.68039 | opp_overlap 1813303 ACAAGCACATGAAAA TAGCAACC CTAG GGTTGCTA TTTTTTTATCCGTTT TERM 2181 1813322 - 1813303 - T 100 -10.8 -4.39889 | opp_overlap 1813303 ACAAGCACATGAAAA TAGCAACC CTAG GGTTGCTA TTTTTTTATCCGTTT Shewmr7_1554 1813802 - 1813368 - | hypothetical protein TERM 2182 1813944 - 1813968 + r 84 -11.5 -3.07344 | GGATGACTTCATTAG GTTATCCACAG AAT CTGTGGACAAC TATGTTGAAGACTAG TERM 2183 1814234 - 1814254 + r 100 -12.6 -4.73682 | GGTTGACAGTTTTTA GGCCAGCT CCAGT AGCTGGCC TTTTCTATTGTGCAC Shewmr7_1555 1815034 - 1814231 - | integrase catalytic subunit TERM 2184 1814465 - 1814445 - G 79 -11.1 -3.54029 | opp_overlap 1814444 1814445 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 2185 1814445 - 1814465 + g 71 -11.1 -2.79327 | opp_overlap 1814445, overlap 1814444 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 2186 1814740 - 1814790 + g 76 -4.8 -4.99638 | gap 1, opp_overlap 1814757 CATCATGCAGTCCTT CCTCTTTCAGCAAAT-TAGGATG CTTCTT CATCCAGTGTTTGCTGAACGTGG TTTTTGTGTAGCTCT Shewmr7_1556 1815459 - 1815064 - | transposase TERM 2187 1815533 - 1815515 - R 100 -8.9 -5.64421 | opp_overlap 1815515 ATCGGAAATAAAAAA GCACTGA GGAGT TCAGTGC TTTTTTGATGATGCT TERM 2188 1815515 - 1815533 + r 100 -9.6 -5.19212 | opp_overlap 1815515 ATCGGAAATAAAAAA GCACTGAG GAG TTCAGTGC TTTTTTGATGATGCT Shewmr7_1557 1817715 - 1815562 - | phosphate acetyltransferase TERM 2189 1816567 - 1816579 + g 90 -9.1 -4.73388 | TGGTGACAGACGGTG CTCCC TTG GGGAG TTTTTGGTCACGCTT Shewmr7_1558 1819037 - 1817838 - | acetate kinase Shewmr7_1559 1819125 - 1819622 + | hypothetical protein pflA 1820378 - 1819638 - | pyruvate formate lyase-activating enzyme 1 TERM 2190 1819702 - 1819724 + g 79 -12 -3.26546 | overlap 1819695 TCCATGGTGTCGCGA CTCGGTGGTG CAA CGCCATCGAG TTGATAGCTTTCTCC TERM 2191 1820395 - 1820435 + r 86 -10.5 -3.75153 | opp_overlap 1820396 1820399, overlap 1820396 1820403 GTGACTCCTGTTGAA ATAAGTGAGGCTGTAGCAC ATT GTACTACAGCCTTACCTAA TTTAGCTTACAGACC TERM 2192 1820434 - 1820396 - R 100 -16.2 -3.53444 | opp_overlap 1820395 1820396 1820403, overlap 1820399 TGACTCCTGTTGAAA TAAGTGAGGCTGTAGCAC ATT GTACTACAGCCTTACCTA ATTTAGCTTACAGAC TERM 2193 1820396 - 1820434 + r 95 -14 -2.84878 | opp_overlap 1820396 1820399, overlap 1820395 1820403 TGACTCCTGTTGAAA TAAGTGAGGCTGTAGCAC ATT GTACTACAGCCTTACCTA ATTTAGCTTACAGAC TERM 2194 1820431 - 1820399 - R 100 -15.7 -3.90744 | opp_overlap 1820396 1820395 1820403, overlap 1820396 CTCCTGTTGAAATAA GTGAGGCTGTAGCAC ATT GTACTACAGCCTTAC CTAATTTAGCTTACA TERM 2195 1820403 - 1820427 + r 95 -12.9 -3.16608 | opp_overlap 1820399 1820396, overlap 1820396 1820395 TGTTGAAATAAGTGA GGCTGTAGCAC ATT GTACTACAGCC TTACCTAATTTAGCT Shewmr7_1561 1822724 - 1820442 - | formate acetyltransferase TERM 2196 1821059 - 1821069 + g 76 -8.2 -4.26903 | TGATCTCAAAGTCGA CGGC AAT GCCG TTTTCATCACGTACA TERM 2197 1821981 - 1822015 + g 79 -6.5 -4.62772 | gap 1, opp_overlap 1821995 TTTGGCGTTAGTGGC TGGGCGAGAAATATCG AAAC CG-TATTTCGCGGCCA TTTGTTTCATTTGAC TERM 2198 1823048 - 1823063 + H 79 -3.3 -5.40474 | GGTTAATCGCAAATT TGCTA GCGAGG TAGCA TTTTTTTAGCACAAT TERM 2199 1823515 - 1823503 - H 74 -6.3 -4.44548 | CAGATTTAACTAAAA TTGGT ATG ACCAA TTAACCTTTTGTGTT Shewmr7_1562 1823755 - 1824729 + | formate/nitrite transporter TERM 2200 1824848 - 1824830 - f 100 -8.8 -5.252 | opp_overlap 1824831, overlap 1824831 TAGGCTCATAAAAAA TGCCCAGT TTT ACTGGGCT TTTTTTGCTGTATTC TERM 2201 1824847 - 1824831 - f 100 -12.3 -3.74397 | opp_overlap 1824831, overlap 1824830 AGGCTCATAAAAAAT GCCCAGT TTT ACTGGGC TTTTTTTGCTGTATT TERM 2202 1824831 - 1824847 + F 100 -12.3 -5.62219 | opp_overlap 1824831 1824830 AGGCTCATAAAAAAT GCCCAGT TTT ACTGGGC TTTTTTTGCTGTATT TERM 2203 1824979 - 1825012 + F 75 -10.5 -2.87931 | gap 1 CGCTTTAGTTTATAG TGCGGCCATTTTCTGT TTG ACATAAAATGGC-GCA TCTATGACGACTCCA Shewmr7_1563 1825016 - 1826584 + | hypothetical protein TERM 2204 1826658 - 1826687 + T 100 -12.3 -3.74012 | opp_overlap 1826664, overlap 1826664 GTTAAACAGGATATA AAAAAACGGCATC CGAG GATGCCGTTTTTG TTGTGGTTTTCTATC TERM 2205 1826681 - 1826664 - T 100 -11.3 -5.74122 | opp_overlap 1826658 1826664 CAGGATATAAAAAAA CGGCATC CGAG GATGCCG TTTTTGTTGTGGTTT TERM 2206 1826664 - 1826681 + T 100 -11.3 -5.25772 | opp_overlap 1826664, overlap 1826658 CAGGATATAAAAAAA CGGCATC CGAG GATGCCG TTTTTGTTGTGGTTT Shewmr7_1564 1829368 - 1826717 - | TonB-dependent receptor TERM 2207 1829731 - 1829746 + r 76 -7.6 -4.23054 | CATTTTAATTTGAGA CCGTAT GTTT ATACGG TTTTGAGTACTGTAT TERM 2208 1829929 - 1829981 + r 73 -3.8 -5.00884 | gap 1, opp_overlap 1829939 1829942, overlap 1829931 1829939 1829942 AAGAGAATAGATTAG TTTAATTA-AATAATAGGAGTGAAT TTAA ATTCACTCCTATTATTATGAGAATA TTTTTTGAACACGAT TERM 2209 1829970 - 1829939 - R 100 -16.2 -3.92178 | opp_overlap 1829931 1829929 1829939 1829942, overlap 1829942 ATTAGTTTAATTAAA TAATAGGAGTGAAT TTAA ATTCACTCCTATTA TTATGAGAATATTTT TERM 2210 1829939 - 1829970 + r 100 -16.2 -3.34431 | opp_overlap 1829939 1829942, overlap 1829931 1829929 1829942 ATTAGTTTAATTAAA TAATAGGAGTGAAT TTAA ATTCACTCCTATTA TTATGAGAATATTTT TERM 2211 1829967 - 1829942 - R 100 -13.5 -4.08651 | opp_overlap 1829939 1829931 1829929 1829942, overlap 1829939 AGTTTAATTAAATAA TAGGAGTGAAT TTAA ATTCACTCCTA TTATTATGAGAATAT TERM 2212 1829942 - 1829967 + r 100 -13.5 -3.80174 | opp_overlap 1829942 1829939, overlap 1829939 1829931 1829929 AGTTTAATTAAATAA TAGGAGTGAAT TTAA ATTCACTCCTA TTATTATGAGAATAT Shewmr7_1565 1831041 - 1830052 - | C4-dicarboxylate transporter/malic acid transport protein Shewmr7_1566 1832236 - 1831163 - | methyltransferase type 12 TERM 2213 1832441 - 1832391 - R 100 -11.4 -3.93695 | gap 1, opp_overlap 1832406 1832431 1832432, overlap 1832392 1832406 GTGATTACCGATAAA TTTCGGCC-ATAAAAATACCCAG ACAAGG CTGGGTATTTTTGCAGGCCGAAT CGCCTGATTACTGAA TERM 2214 1832440 - 1832392 - R 100 -14.9 -2.95896 | gap 1, opp_overlap 1832406 1832431 1832432, overlap 1832391 1832406 TGATTACCGATAAAT TTCGGCC-ATAAAAATACCCAG ACAAGG CTGGGTATTTTTGCAGGCCGAA TCGCCTGATTACTGA TERM 2215 1832425 - 1832406 - R 91 -7.9 -4.82901 | opp_overlap 1832406, overlap 1832392 1832391 TTTCGGCCATAAAAA TACCCAG ACAAGG CTGGGTA TTTTTGCAGGCCGAA TERM 2216 1832406 - 1832425 + r 82 -7.9 -4.56597 | opp_overlap 1832406 1832392 1832391 TTTCGGCCATAAAAA TACCCAG ACAAGG CTGGGTA TTTTTGCAGGCCGAA Shewmr7_1567 1833417 - 1832449 - | cysteine synthase Shewmr7_1568 1833663 - 1835009 + | RDD domain-containing protein TERM 2217 1835583 - 1835599 + G 71 -6.5 -4.19177 | CACAGGTGAACTACC GTGACCG TGA CAGTCAC TTTATCTTCGGGGAT Shewmr7_1569 1835006 - 1836127 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 2218 1836132 - 1836165 + F 100 -15.5 -4.52589 | opp_overlap 1836122 1836133 1836138, overlap 1836133 AAAAACGCTAAATTG ACTAAAGCCCCATTA TCAG TAATGGGGCTTTAGC TTTTATATCAGCACA TERM 2219 1836133 - 1836164 + F 100 -19 -3.31232 | opp_overlap 1836122 1836133 1836138, overlap 1836132 AAAACGCTAAATTGA CTAAAGCCCCATTA TCAG TAATGGGGCTTTAG CTTTTATATCAGCAC TERM 2220 1836164 - 1836133 - f 100 -19 -2.67441 | opp_overlap 1836133 1836132, overlap 1836122 1836138 AAAACGCTAAATTGA CTAAAGCCCCATTA TCAG TAATGGGGCTTTAG CTTTTATATCAGCAC TERM 2221 1836159 - 1836138 - f 100 -13.1 -3.82097 | opp_overlap 1836133 1836132, overlap 1836133 1836122 GCTAAATTGACTAAA GCCCCATTA TCAG TAATGGGGC TTTAGCTTTTATATC Shewmr7_1570 1836296 - 1836745 + | hypothetical protein TERM 2222 1836763 - 1836784 + T 90 -10.9 -3.96892 | gap 1, opp_overlap 1836763 AGCATTCCGATTTAA GCCCACAAGC CTT GCT-GTGGGC TTTATGCTCAACCTT TERM 2223 1836784 - 1836763 - T 79 -10.9 -3.06302 | gap 1, opp_overlap 1836763 AGCATTCCGATTTAA GCCCACAAGC CTT GCT-GTGGGC TTTATGCTCAACCTT Shewmr7_1571 1839204 - 1836805 - | hypothetical protein TERM 2224 1838287 - 1838272 - G 80 -4.6 -5.14563 | opp_overlap 1838272 TTTCTCATCAAAAAA CAGCGC AAAA GTGCTG TTGATATCAAGCTGG TERM 2225 1839298 - 1839322 + r 100 -18.7 -3.53761 | opp_overlap 1839295 1839294 1839290 GCTGAAACCAAGGCG GCACTGGATGC CGA GCATCCAGTGC TTTGGGGGAGGATTA Shewmr7_1572 1840114 - 1839335 - | putative sulfate transport protein CysZ TERM 2226 1839609 - 1839596 - G 74 -2.3 -5.06816 | AGCGCTGAATAAAAA CCACA AAAT TGGGG CTAAGGTTTGCCCGA TERM 2227 1839900 - 1839890 - G 76 -5.4 -4.8048 | opp_overlap 1839890 CGGCCAGAGCAAAAA GTTG AGC CAAC TTAAGTACTCGGGAA TERM 2228 1840284 - 1840298 + H 100 -10 -5.31275 | CTGCCCCCATATTCA CCATCG TTC CGATGG TTTTTTATACTGAGA TERM 2229 1840609 - 1840593 - g 75 -9.3 -3.93868 | overlap 1840591 GTTTGAAAATAAAGA GGGCCGC CTT GCGGGCC AATACGCCAGTTATG TERM 2230 1841493 - 1841478 - g 70 -10.4 -2.90349 | overlap 1841477 GGCCCAAAGTGAAAG CGCCAG AGTG CTGGCG GCGACCGTTGCTCAG TERM 2231 1843156 - 1843136 - g 73 -3.4 -5.02074 | gap 1, overlap 1843140 TGATCCGCCAAAAAA TTATTCGCT TAGG AGCGA-TAA ACCTCGCGGCGATCG Shewmr7_1573 1840330 - 1843758 + | chromosome segregation protein SMC Shewmr7_1574 1843785 - 1844825 + | cell division protein ZipA TERM 2232 1844858 - 1844880 + F 100 -12.7 -5.08011 | opp_overlap 1844858 GCGGTGATAGACAGA TGGGGCCGC TAAAT GCGGCCTCA TTTTTTGCAACTTTT TERM 2233 1844880 - 1844858 - f 76 -10.5 -3.05022 | opp_overlap 1844858 GCGGTGATAGACAGA TGGGGCCGC TAAAT GCGGCCTCA TTTTTTGCAACTTTT TERM 2234 1845613 - 1845633 + G 70 -3.1 -4.87665 | opp_overlap 1845615, overlap 1845615 1845617 GCTCGACAGTAAAAT TACCGCGTC ACG GGCGCTGTC TTTTTATGCCTACGC Shewmr7_1575 1844918 - 1846990 + | DNA ligase, NAD-dependent TERM 2235 1847014 - 1847030 + F 100 -11.5 -5.28176 | opp_overlap 1847014 CCCTTCGATTATAAA GCCCTGC CTT GCGGGGC TTTTTTATGACTAAG TERM 2236 1847030 - 1847014 - f 83 -9.3 -3.96148 | opp_overlap 1847014 CCCTTCGATTATAAA GCCCTGC CTT GCGGGGC TTTTTTATGACTAAG TERM 2237 1847367 - 1847396 + G 70 -2.8 -4.87291 | opp_overlap 1847367 GATAGATCAGAATTA GTCAGGCTCTTC TATCCC GAAAAGTCAGAC TTTTTGCTTGCACTC TERM 2238 1847421 - 1847440 + G 71 -5.6 -4.58466 | overlap 1847423 GCACTCGCGGCGGGC TTGGGCGC GGTG GCGCTCTA TTTTGTGGTTATCGC TERM 2239 1847423 - 1847438 + G 72 -8.2 -3.89837 | overlap 1847421 ACTCGCGGCGGGCTT GGGCGC GGTG GCGCTC TATTTTGTGGTTATC Shewmr7_1576 1847217 - 1847711 + | hypothetical protein Shewmr7_1577 1847921 - 1849126 + | metal dependent phosphohydrolase TERM 2240 1849895 - 1849933 + G 71 -11.1 -2.83522 | gap 2, overlap 1849894 GAGAAGCGAATTTTA TGTGGCCGCCGCCGAGTCC TTG GGATTAG-CGGC-GCCACA ATTTAATGGGCAGGT Shewmr7_1578 1849194 - 1850045 + | NAD-dependent epimerase/dehydratase Shewmr7_1579 1850176 - 1850799 + | DSBA oxidoreductase TERM 2241 1850856 - 1850876 + F 100 -14.1 -5.28315 | opp_overlap 1850859 TTTATCTGTTTCCTA TAACCCAGC CAT GCTGGGTTA TTTTTTACCTTTTGT TERM 2242 1850873 - 1850859 - f 86 -11.4 -3.28791 | opp_overlap 1850856 ATCTGTTTCCTATAA CCCAGC CAT GCTGGG TTATTTTTTACCTTT Shewmr7_1580 1851237 - 1851503 + | hypothetical protein TERM 2243 1851672 - 1851688 + G 86 -8.7 -4.56702 | overlap 1851661 CAACTGCGGCGGACT GGATGTC AGC GGCATCC TTTATTTCGTTGGCA Shewmr7_1581 1851515 - 1853251 + | Na+/solute symporter TERM 2244 1853294 - 1853269 - f 77 -10.5 -3.20573 | opp_overlap 1853269 1853274, overlap 1853274 TCATTTAGATTAAGA GAAAAGGACGC GTTT GCGTCCTTTTG TTTTTGGTGGTGTCA TERM 2245 1853269 - 1853294 + F 100 -10.5 -4.79223 | opp_overlap 1853269 1853274, overlap 1853274 TCATTTAGATTAAGA GAAAAGGACGC GTTT GCGTCCTTTTG TTTTTGGTGGTGTCA TERM 2246 1853274 - 1853289 + F 100 -10.4 -5.3104 | opp_overlap 1853269 1853274, overlap 1853269 TAGATTAAGAGAAAA GGACGC GTTT GCGTCC TTTTGTTTTTGGTGG TERM 2247 1853289 - 1853274 - f 100 -10.4 -4.7219 | opp_overlap 1853274 1853269, overlap 1853269 TAGATTAAGAGAAAA GGACGC GTTT GCGTCC TTTTGTTTTTGGTGG TERM 2248 1853785 - 1853819 + G 71 -7.2 -4.07568 | gap 1 GATAAATTTTTCACC CGCGCCTT-TGCC AAGCGGTTGC GGCATGAGGCGCG TTTTAAGGCCAAAGA TERM 2249 1854431 - 1854441 + G 79 -8.2 -4.3534 | overlap 1854420 AAATTCTCGGTGAGG CGCC GAT GGCG TTTTGCTGGTTAGCC Shewmr7_1582 1853401 - 1855263 + | cyclic nucleotide-binding protein Shewmr7_1583 1855263 - 1855949 + | exonuclease, RNase T and DNA polymerase III TERM 2250 1856081 - 1856047 - T 79 -10.9 -3.08679 | opp_overlap 1856047, overlap 1856049 CTTCTTCATTCAACA GACTTGGCTAAGT CCATGGTTC ACTTAGCCAAGCC TCTGATTAGAAAAAA TERM 2251 1856079 - 1856049 - T 74 -9.9 -3.10344 | opp_overlap 1856047, overlap 1856047 TCTTCATTCAACAGA CTTGGCTAAGT CCATGGTTC ACTTAGCCAAG CCTCTGATTAGAAAA Shewmr7_1584 1856622 - 1856197 - | MarR family transcriptional regulator TERM 2252 1856672 - 1856707 + H 89 -12.2 -3.31625 | opp_overlap 1856668 1856666 1856665, overlap 1856665 TTAACAAATTACGCG GTCTAAAAATAGTTTG CGCA CAAAATATTTTTAGAC TTAGTAGTTGCTTTC Shewmr7_1585 1856856 - 1857851 + | alcohol dehydrogenase TERM 2253 1857952 - 1857925 - f 100 -18.6 -3.60214 | opp_overlap 1857925 AGGTTAACCATATAA CGGAAGCCTTTG ACTG CAAAGGCTTCCG TTTTTTCTGCTTATC TERM 2254 1857925 - 1857952 + F 100 -18.6 -5.39755 | opp_overlap 1857925 AGGTTAACCATATAA CGGAAGCCTTTG ACTG CAAAGGCTTCCG TTTTTTCTGCTTATC Shewmr7_1586 1858291 - 1858890 + | hypothetical protein TERM 2255 1858917 - 1858886 - T 78 -4.4 -5.10064 | opp_overlap 1858893 1858907, overlap 1858888 1858893 CTGAAGAGATAAAAA TGTAAAAGGCCATC CGAA GATGGCCTTTGAGC CCTGTTAGCGGGATT TERM 2256 1858915 - 1858888 - T 81 -11.4 -2.77888 | opp_overlap 1858893 1858907, overlap 1858886 1858893 GAAGAGATAAAAATG TAAAAGGCCATC CGAA GATGGCCTTTGA GCCCTGTTAGCGGGA TERM 2257 1858893 - 1858910 + T 90 -11.3 -3.57615 | opp_overlap 1858888 1858886 1858893, overlap 1858907 GATAAAAATGTAAAA GGCCATC CGAA GATGGCC TTTGAGCCCTGTTAG TERM 2258 1858910 - 1858893 - T 100 -11.3 -4.5115 | opp_overlap 1858893 1858907, overlap 1858888 1858886 GATAAAAATGTAAAA GGCCATC CGAA GATGGCC TTTGAGCCCTGTTAG Shewmr7_1587 1859999 - 1858935 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 2259 1860043 - 1860023 - R 100 -6.8 -5.63517 | CTCTCAAATAAAAAA GGCAGAAC TTAGC GTGCTGCC TCAAATCGACAACAA Shewmr7_1588 1860763 - 1860092 - | GntR family transcriptional regulator Shewmr7_1589 1861081 - 1861632 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 2260 1863811 - 1863826 + T 79 -7.6 -4.28254 | GCATTTTCGACATTC GGTACA TCCG TGTACC TTTTGAGTGTTCACA TERM 2261 1864280 - 1864310 + T 100 -8.5 -5.00884 | opp_overlap 1864279 AATCTGGTTAGAGAT GCCAAAGATAA ACTGAAAAA TTATCTTTGGC TTTTTTAAGCCCGCT TERM 2262 1864435 - 1864395 - T 84 -2.7 -5.63374 | opp_overlap 1864402 1864407 1864409 1864414, overlap 1864409 TTAATACGAAAAAAA TTGAGTTCTTAAAACACTT TTT AAGTGTCTTGAATATTCAA GTCTAAGGCGAGTCC TERM 2263 1865015 - 1865003 - T 83 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 2264 1865813 - 1865797 - T 85 -9.4 -4.08546 | overlap 1865810 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 2265 1866267 - 1866295 + T 72 -8.1 -3.85698 | TCCCTAAGCTGACGG CAGTCGCAGATAC CAG GTGGCTGCAACTG TTTATCAAAAACACA TERM 2266 1867481 - 1867469 - T 72 -6.3 -4.2586 | TTAGACGAATACAAA CACTT AAG AAGTG CAACTCAAACCAGCT TERM 2267 1867809 - 1867765 - T 100 -23.3 -3.71527 | opp_overlap 1867769 1867776, overlap 1867769 1867776 CGCCAAGCATCCAAA TAAACACAAAAGCCCTAGC CTAAACC GCTAGGGCTTTTGTGTTTA TACGCTCCGCGAAAA TERM 2268 1867769 - 1867805 + T 100 -19.7 -3.89346 | opp_overlap 1867765 1867769 1867776, overlap 1867776 AAGCATCCAAATAAA CACAAAAGCCCTAGC CTAAACC GCTAGGGCTTTTGTG TTTATACGCTCCGCG TERM 2269 1867805 - 1867769 - T 100 -19.7 -4.47786 | opp_overlap 1867769 1867776, overlap 1867765 1867776 AAGCATCCAAATAAA CACAAAAGCCCTAGC CTAAACC GCTAGGGCTTTTGTG TTTATACGCTCCGCG TERM 2270 1867776 - 1867798 + T 100 -10.6 -4.84918 | opp_overlap 1867769 1867765 1867776, overlap 1867769 CAAATAAACACAAAA GCCCTAGC CTAAACC GCTAGGGC TTTTGTGTTTATACG TERM 2271 1867798 - 1867776 - T 100 -10.6 -4.93454 | opp_overlap 1867776 1867769, overlap 1867769 1867765 CAAATAAACACAAAA GCCCTAGC CTAAACC GCTAGGGC TTTTGTGTTTATACG TERM 2272 1867974 - 1868006 + T 100 -11.4 -4.98616 | opp_overlap 1867974 1867977 1867981, overlap 1867981 AAGCGCCTAATTAAA CAACGAAGCCAGCT GAATA AGCTGGCTTTTTTG TTTTTGCTGTTTTCA TERM 2273 1868006 - 1867974 - T 83 -9.2 -3.90856 | opp_overlap 1867974 1867981, overlap 1867977 1867981 AAGCGCCTAATTAAA CAACGAAGCCAGCT GAATA AGCTGGCTTTTTTG TTTTTGCTGTTTTCA TERM 2274 1867981 - 1867999 + T 100 -10.3 -5.95286 | opp_overlap 1867977 1867974 1867981, overlap 1867974 TAATTAAACAACGAA GCCAGCT GAATA AGCTGGC TTTTTTGTTTTTGCT TERM 2275 1867999 - 1867981 - T 82 -10.3 -3.65446 | opp_overlap 1867981 1867974, overlap 1867977 1867974 TAATTAAACAACGAA GCCAGCT GAATA AGCTGGC TTTTTTGTTTTTGCT TERM 2276 1868116 - 1868137 + T 75 -8.7 -3.59698 | opp_overlap 1868118, overlap 1868118 TATCAGGCCAATAAA AAGAGCAGC CTAG GCTGCTCTA TTCTGTATGGGGTAG TERM 2277 1868118 - 1868135 + T 86 -11.3 -3.37466 | opp_overlap 1868118, overlap 1868116 TCAGGCCAATAAAAA GAGCAGC CTAG GCTGCTC TATTCTGTATGGGGT TERM 2278 1868135 - 1868118 - T 100 -11.3 -5.08601 | opp_overlap 1868118 1868116 TCAGGCCAATAAAAA GAGCAGC CTAG GCTGCTC TATTCTGTATGGGGT Shewmr7_1590 1868900 - 1868196 - | hypothetical protein TERM 2279 1868302 - 1868312 + g 72 -8.2 -3.85505 | TGAGTCGGCGAGTCT GGCG CTG CGCC TTGTGTTATTGCTGC TERM 2280 1869040 - 1869064 + r 100 -13 -3.51924 | opp_overlap 1869040 1869045, overlap 1869045 GGGATCTAGAATAAA GAAAAGGCTC ACTGG GAGCCTTTTC TTGTCTAAGTACGAG TERM 2281 1869064 - 1869040 - R 100 -13 -4.33417 | opp_overlap 1869040 1869045, overlap 1869045 GGGATCTAGAATAAA GAAAAGGCTC ACTGG GAGCCTTTTC TTGTCTAAGTACGAG TERM 2282 1869045 - 1869059 + r 85 -7.1 -4.84914 | opp_overlap 1869040 1869045, overlap 1869040 CTAGAATAAAGAAAA GGCTC ACTGG GAGCC TTTTCTTGTCTAAGT TERM 2283 1869059 - 1869045 - R 90 -7.1 -5.14682 | opp_overlap 1869045 1869040, overlap 1869040 CTAGAATAAAGAAAA GGCTC ACTGG GAGCC TTTTCTTGTCTAAGT cpdB 1871184 - 1869127 - | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 2284 1870599 - 1870584 - G 78 -6.2 -4.78237 | TATCCCACAATAAAA TTTGTG GTGG CACAAA ACCAATATAACCAAT TERM 2285 1870675 - 1870692 + g 76 -2.7 -5.07053 | TTTAATGATATAAGG GGTGA ATAAATGC TCACC TTTTTTCACATCATT TERM 2286 1870864 - 1870880 + g 75 -8.7 -3.86194 | CATCGCTTTATAGGC TGGGTGA ACA TCGCCCA TTTGTAGGCCGACTT TERM 2287 1871238 - 1871219 - H 71 -9.4 -3.06162 | overlap 1871221 TATTTGACCCTAATA CATGTTCT TTTA AGAACATG CCCATCATCCTGTTA TERM 2288 1871992 - 1871943 - g 78 -6.1 -4.82901 | overlap 1871944 GCTTGCTCAGAAAAA CCGGCAGCCAACACCGAGGCCGC CAAT GCGGTCGCGACGCAAGCTGCTGC ATCGACTCAAGCTAA TERM 2289 1871991 - 1871944 - g 72 -9.6 -3.49419 | overlap 1871943 CTTGCTCAGAAAAAC CGGCAGCCAACACCGAGGCCGC CAAT GCGGTCGCGACGCAAGCTGCTG CATCGACTCAAGCTA TERM 2290 1872296 - 1872274 - g 70 -2.6 -5.03715 | overlap 1872278 ATGATTTTCAAAAAA CCGAGGCG GACTTAG CGCCTAAG CTGTCGGCTCACCGC TERM 2291 1873898 - 1873887 - g 71 -7.2 -4.07885 | CATGGTGGCTTAAAA GCCG AAAA CGGC GATAAGTTCCGTGAT Shewmr7_1592 1871877 - 1874024 + | peptidyl-dipeptidase Dcp TERM 2292 1874050 - 1874075 + F 100 -14.1 -5.46629 | opp_overlap 1874043 1874050 GTAAAAAGGGCCAAA GGCTTGGTAGG GCAA CCTATCAAGCC TTTTTTTACGCTATT TERM 2293 1874075 - 1874050 - f 93 -11.9 -3.68853 | opp_overlap 1874050, overlap 1874043 GTAAAAAGGGCCAAA GGCTTGGTAGG GCAA CCTATCAAGCC TTTTTTTACGCTATT TERM 2294 1874761 - 1874771 + G 73 -5.4 -4.63218 | TGCGCCTAAAATGGG TCAC TTT GTGA TTTTCTTAAGCGAGC Shewmr7_1593 1874252 - 1874875 + | prolyl 4-hydroxylase, alpha subunit TERM 2295 1874929 - 1874956 + F 100 -18.6 -5.64873 | opp_overlap 1874922 TAATATGATTTCAAG GCGCAGTGTTTC CGCT GAAACACTGCGC TTTTTTATTCTTAAC Shewmr7_1594 1875315 - 1875917 + | GCN5-related N-acetyltransferase TERM 2296 1876216 - 1876234 + G 70 -2.3 -4.91109 | overlap 1876219 TATCCCAGTTTTTCA TCGCTGC GTTTA GCGCCGA TTTTTATCCTAAACG Shewmr7_1595 1876000 - 1876464 + | GCN5-related N-acetyltransferase Shewmr7_1596 1876499 - 1876894 + | hypothetical protein TERM 2297 1876902 - 1876946 + F 100 -8.8 -4.59089 | gap 2, opp_overlap 1876912 1876916, overlap 1876910 1876912 1876916 CCATGTAAGCCTTGC CTGC-GTTAA-ACAAAGGAGCC TGA GGCTCCTTTGTGTTATCTGAAG TTTATTTATAGATTG TERM 2298 1876910 - 1876936 + F 100 -13.8 -3.54051 | opp_overlap 1876912 1876916, overlap 1876902 1876912 1876916 GCCTTGCCTGCGTTA AACAAAGGAGCC TGA GGCTCCTTTGTG TTATCTGAAGTTTAT TERM 2299 1876912 - 1876934 + F 100 -16.4 -3.33814 | opp_overlap 1876912 1876916, overlap 1876910 1876902 1876916 CTTGCCTGCGTTAAA CAAAGGAGCC TGA GGCTCCTTTG TGTTATCTGAAGTTT TERM 2300 1876934 - 1876912 - f 100 -16.4 -3.53012 | opp_overlap 1876912 1876910 1876902 1876916, overlap 1876916 CTTGCCTGCGTTAAA CAAAGGAGCC TGA GGCTCCTTTG TGTTATCTGAAGTTT TERM 2301 1876916 - 1876930 + F 100 -11.4 -4.31164 | opp_overlap 1876912 1876916, overlap 1876912 1876910 1876902 CCTGCGTTAAACAAA GGAGCC TGA GGCTCC TTTGTGTTATCTGAA TERM 2302 1876930 - 1876916 - f 100 -11.4 -4.41348 | opp_overlap 1876916 1876912 1876910 1876902, overlap 1876912 CCTGCGTTAAACAAA GGAGCC TGA GGCTCC TTTGTGTTATCTGAA TERM 2303 1877380 - 1877392 + G 70 -4.8 -4.62471 | opp_overlap 1877370 TGAAATGTATGGCTA CAGC CTATT GCTG TTTTTGGGGCTTAAC Shewmr7_1597 1877156 - 1877542 + | hypothetical protein Shewmr7_1598 1877764 - 1878828 + | hypothetical protein TERM 2304 1878876 - 1878888 + G 71 -7.7 -4.08706 | TATCTGCGCCGCAAT CTCTG TGG CAGAG TTTATATGCTAAGGG Shewmr7_1599 1878821 - 1879945 + | hypothetical protein Shewmr7_1600 1879945 - 1880460 + | hypothetical protein TERM 2305 1880481 - 1880515 + F 91 -8.1 -4.77036 | gap 2, opp_overlap 1880486, overlap 1880482 1880486 ACCCTGATGATCGTT TA-C-AAGATGGTGAGC TAT GCTCGCCATCTTCGCTA TTTTTCCTAGTCCAA TERM 2306 1880482 - 1880513 + F 80 -8.8 -4.00443 | gap 1, opp_overlap 1880486, overlap 1880481 1880486 CCCTGATGATCGTTT AC-AAGATGGTGAGC TAT GCTCGCCATCTTCGC TATTTTTCCTAGTCC TERM 2307 1880508 - 1880486 - f 89 -12 -3.30441 | opp_overlap 1880482 1880481 1880486 GATGATCGTTTACAA GATGGTGAGC TAT GCTCGCCATC TTCGCTATTTTTCCT TERM 2308 1880486 - 1880508 + F 100 -14.2 -3.33434 | opp_overlap 1880486, overlap 1880482 1880481 GATGATCGTTTACAA GATGGTGAGC TAT GCTCGCCATC TTCGCTATTTTTCCT TERM 2309 1880738 - 1880715 - g 85 -7.4 -4.89477 | opp_overlap 1880733, overlap 1880717 TGTTTAATAACAAAA CACTGTTGGC GTTA GCCATCAGTA GCGTGTGTGGGTTTG TERM 2310 1880736 - 1880717 - g 71 -7.8 -4.06582 | opp_overlap 1880733, overlap 1880715 TTTAATAACAAAACA CTGTTGGC GTTA GCCATCAG TAGCGTGTGTGGGTT Shewmr7_1601 1880699 - 1883545 + | PKD domain-containing protein TERM 2311 1883594 - 1883570 - f 80 -11.5 -2.60496 | opp_overlap 1883575, overlap 1883575 TCTTTCTTTAAATAT CAAAAGCCTGC ATC GCAGGCTTTTT TACGTTTATTCACTT TERM 2312 1883589 - 1883575 - f 100 -11.4 -4.49756 | opp_overlap 1883575, overlap 1883570 CTTTAAATATCAAAA GCCTGC ATC GCAGGC TTTTTTACGTTTATT TERM 2313 1883575 - 1883589 + F 100 -11.4 -5.25805 | opp_overlap 1883575 1883570 CTTTAAATATCAAAA GCCTGC ATC GCAGGC TTTTTTACGTTTATT Shewmr7_1602 1883743 - 1884192 + | hypothetical protein TERM 2314 1884220 - 1884196 - T 100 -10.8 -4.9792 | gap 1, overlap 1884198 1884211 GACGGCAGATAAAAA GAGGGCGCTAA TTGA TTAGCGCCC-C GATAAGGATTAAAGC TERM 2315 1884219 - 1884198 - T 100 -14.5 -4.11141 | overlap 1884196 1884211 CGGCAGATAAAAAGA GGGCGCTAA TTGA TTAGCGCCC CGATAAGGATTAAAG Shewmr7_1603 1885125 - 1884229 - | hypothetical protein TERM 2316 1884404 - 1884438 + g 72 -3.5 -4.82855 | gap 1, overlap 1884432 AAATCTTTACCGATA GTCTCGGC-CAGCTCC GCGG GGAGTTCCGCCAAGGC TTTTTGGGTTTGCTG TERM 2317 1884644 - 1884628 - G 71 -5.7 -4.36914 | overlap 1884630 GGTTTGGGCATAAAA CTGCGCC ATG AGCGCCG CAATCGATTGCTGAC Shewmr7_1604 1885894 - 1885136 - | hypothetical protein Shewmr7_1605 1886433 - 1885894 - | hypothetical protein TERM 2318 1886258 - 1886279 + g 73 -5.1 -4.66163 | overlap 1886260 AGTGCCACAGGCAGG TACTCGGGT ACTG ACTCGAGCA TTTTTGGATCGGCCT TERM 2319 1886540 - 1886495 - R 71 -4.7 -4.63218 | opp_overlap 1886503, overlap 1886496 1886508 CGTGTTGCAATAAAA GGTCCAAATTAAGGGGCTTGG CAAA CTAAGCTCATTAATTTGGCAC TCCCAGCGTTGCACT Shewmr7_1606 1886853 - 1886569 - | heat shock protein DnaJ domain-containing protein TERM 2320 1887248 - 1887234 - H 100 -7.1 -5.60993 | TCGGGTACAAAAAAA CCAGC TTAAT GCTGG CCTAGTCGTTACTTT TERM 2321 1887399 - 1887385 - H 100 -7.1 -5.60993 | opp_overlap 1887391 TCGGGCACAAAAAAA CCAGC TTAAT GCTGG CCCAGTCGTTACTTT TERM 2322 1887670 - 1887683 + H 77 -4.5 -4.96501 | opp_overlap 1887670 TCTGTTATCTAAGAA TTGCC CAAG GGCGA TTTCTTTTTATAAGC Shewmr7_1607 1888162 - 1890303 + | 23S rRNA m(2)G2445 methyltransferase Shewmr7_1608 1890296 - 1890535 + | glutaredoxin 2 TERM 2323 1890774 - 1890756 - g 71 -10.2 -3.14211 | opp_overlap 1890767, overlap 1890758 AGCCGTTTGCAGCAA GATCCGCC AAA GGCGGAGC AGGGTTCGGTCTACT TERM 2324 1890772 - 1890758 - g 74 -11.4 -3.13403 | opp_overlap 1890767, overlap 1890756 CCGTTTGCAGCAAGA TCCGCC AAA GGCGGA GCAGGGTTCGGTCTA TERM 2325 1891791 - 1891772 - g 82 -7.2 -4.62069 | opp_overlap 1891758 1891757 GGGTGAGGGTAAAAA GACCATCA CCAT TAATGGTC AAGACCGACATATCT Shewmr7_1609 1890537 - 1892459 + | ABC transporter ATPase component Shewmr7_1610 1892488 - 1894314 + | hypothetical protein TERM 2326 1894373 - 1894333 - f 73 -10.6 -2.53263 | opp_overlap 1894344, overlap 1894344 TTCAGCTTGAATTCA GACTAAAAAAATCGAGGC TAAAT GCCTCGATTTTTTTTAAC TACGATCTCAATAGT TERM 2327 1894344 - 1894362 + F 100 -10.3 -5.81412 | opp_overlap 1894333 1894344 TTCAGACTAAAAAAA TCGAGGC TAAAT GCCTCGA TTTTTTTTAACTACG TERM 2328 1894362 - 1894344 - f 100 -10.3 -5.58454 | opp_overlap 1894344, overlap 1894333 TTCAGACTAAAAAAA TCGAGGC TAAAT GCCTCGA TTTTTTTTAACTACG Shewmr7_1611 1894502 - 1894678 + | ribosome modulation factor TERM 2329 1894734 - 1894751 + T 100 -11.3 -5.10064 | opp_overlap 1894733 1894734 GTAATGCAGCATAAT TGCCCTC AGAT GAGGGCA TTTTTGTATCTTAGC TERM 2330 1894751 - 1894734 - T 80 -11.3 -2.6627 | opp_overlap 1894734, overlap 1894733 GTAATGCAGCATAAT TGCCCTC AGAT GAGGGCA TTTTTGTATCTTAGC Shewmr7_1612 1895301 - 1894786 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase Shewmr7_1613 1897124 - 1895376 - | ATP-dependent protease TERM 2331 1897011 - 1897024 + g 72 -3.8 -4.79223 | opp_overlap 1897020 CAATACACGTTCTTG CCCT AAAAGC AGGG TTTTTAATCCTGTGG TERM 2332 1897429 - 1897460 + H 100 -13.2 -4.70879 | opp_overlap 1897436, overlap 1897436 CTCCGCCATATTTTA CGGAAAAGCCATCA GCAA TGATGGCTTTTTTG TTTTTGCAATTTAGG TERM 2333 1897453 - 1897436 - H 88 -9.9 -4.19258 | opp_overlap 1897429 1897436 ATATTTTACGGAAAA GCCATCA GCAA TGATGGC TTTTTTGTTTTTGCA TERM 2334 1897436 - 1897453 + H 100 -9.9 -5.93252 | opp_overlap 1897436, overlap 1897429 ATATTTTACGGAAAA GCCATCA GCAA TGATGGC TTTTTTGTTTTTGCA TERM 2335 1897534 - 1897551 + H 90 -4.1 -5.72622 | opp_overlap 1897533 1897534, overlap 1897535 TATTTTCCGCGAAAT GCCATCA GCTA TGATGGA TTTTTTGTTTATAGA TERM 2336 1897535 - 1897550 + H 74 -7.6 -4.01946 | opp_overlap 1897533 1897534, overlap 1897534 ATTTTCCGCGAAATG CCATCA GCTA TGATGG ATTTTTTGTTTATAG TERM 2337 1898152 - 1898183 + H 100 -13.2 -4.71482 | opp_overlap 1898159, overlap 1898159 CTCCGCCATATTCTA CGGAAAAGCCATCA GCAA TGATGGCTTTTTTG TTTTTGCAATTTAGT TERM 2338 1898176 - 1898159 - H 88 -9.9 -4.19258 | opp_overlap 1898152 1898159 ATATTCTACGGAAAA GCCATCA GCAA TGATGGC TTTTTTGTTTTTGCA TERM 2339 1898159 - 1898176 + H 100 -9.9 -5.93252 | opp_overlap 1898159, overlap 1898152 ATATTCTACGGAAAA GCCATCA GCAA TGATGGC TTTTTTGTTTTTGCA TERM 2340 1898352 - 1898383 + H 73 -5.2 -4.70879 | opp_overlap 1898360, overlap 1898359 1898360 CTTCGCAATACTCCA CAGATAAACCATCA GCAA TGATGGCTTTTTTG TTTTTGCAATTTAGG TERM 2341 1898359 - 1898376 + H 100 -4.1 -5.93252 | opp_overlap 1898360, overlap 1898352 1898360 ATACTCCACAGATAA ACCATCA GCAA TGATGGC TTTTTTGTTTTTGCA TERM 2342 1898375 - 1898360 - H 76 -7.6 -4.13246 | opp_overlap 1898359 1898352 1898360 TACTCCACAGATAAA CCATCA GCAA TGATGG CTTTTTTGTTTTTGC TERM 2343 1898360 - 1898375 + H 76 -7.6 -4.13511 | opp_overlap 1898360, overlap 1898359 1898352 TACTCCACAGATAAA CCATCA GCAA TGATGG CTTTTTTGTTTTTGC TERM 2344 1899089 - 1899116 + G 70 -9.2 -3.59979 | overlap 1899072 AAAGGGGCAACGCCA CCTGAGGTATTG CAAG CGATACGTCAGG TTTCCCGTGGGCAGC Shewmr7_1614 1898765 - 1899409 + | response regulator TERM 2345 1899395 - 1899416 + F 76 -9.5 -3.5361 | gap 1, overlap 1899397 TATAAAATGTTAGAC GCTGGCCATT TCT AATGGCC-GC TTGTGTCAATGGTTC TERM 2346 1899590 - 1899609 + G 70 -10.8 -3.0094 | GGTTTATCGCATGTA TGACGTCA AAGG TGACGTCA TCTATGTGGGTAAAG TERM 2347 1900640 - 1900651 + G 74 -4.4 -4.79752 | opp_overlap 1900640 GTCCCATAAAAACAC CGTT GAAC AACG TTTTGTCTTGTTGGA uvrC 1899519 - 1901348 + | excinuclease ABC subunit C Shewmr7_1616 1901396 - 1901944 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 2348 1902352 - 1902332 - f 75 -10.5 -2.89742 | overlap 1902335 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGGTAACAGCGTGC TERM 2349 1902349 - 1902335 - f 73 -8.6 -3.5947 | overlap 1902332 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGGTAACAGCG TERM 2350 1902569 - 1902549 - f 75 -10.5 -2.89742 | overlap 1902552 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGGTAACAGCGTGC TERM 2351 1902566 - 1902552 - f 73 -8.6 -3.5947 | overlap 1902549 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGGTAACAGCG TERM 2352 1902627 - 1902662 + F 93 -13.4 -2.71712 | opp_overlap 1902635, overlap 1902635 TATTCTTAGTGAATA GTAAATAAGCCTCGAC ATTA GTCGGGGCTTTTTTGC ATTTGGGGCCCGGGA TERM 2353 1902654 - 1902635 - f 85 -9.2 -4.08853 | opp_overlap 1902627 1902635 GTGAATAGTAAATAA GCCTCGAC ATTA GTCGGGGC TTTTTTGCATTTGGG TERM 2354 1902635 - 1902654 + F 100 -11.4 -5.22039 | opp_overlap 1902635, overlap 1902627 GTGAATAGTAAATAA GCCTCGAC ATTA GTCGGGGC TTTTTTGCATTTGGG TERM 2355 1902672 - 1902688 + F 73 -5.8 -4.43208 | TTTTGCATTTGGGGC CCGGGA TTTAT TCTCGG TTTGTTTGAAAATGT Shewmr7_1619 1903541 - 1903819 + | TM2 domain-containing protein TERM 2356 1903974 - 1903997 + T 86 -11.8 -3.09273 | TAGCAAAGTGTCCTA TTGCCTTGGT CAGG GCCAAGGCAA TCTGTATTGCACAAC TERM 2357 1904029 - 1904018 - T 73 -5.8 -4.49389 | ATTGCACAACCAAAA CAGG TCGA CCTG AAAAAGCCCCGTGGT TERM 2358 1904034 - 1904056 + T 73 -5.4 -4.60041 | opp_overlap 1904035, overlap 1904035 AGGTCGACCTGAAAA AGCCCCGTGG TTT TCACGAGGCA TTTTTACACATCCAT TERM 2359 1904035 - 1904055 + T 71 -8.9 -3.35542 | opp_overlap 1904035, overlap 1904034 GGTCGACCTGAAAAA GCCCCGTGG TTT TCACGAGGC ATTTTTACACATCCA TERM 2360 1904055 - 1904035 - T 100 -10.4 -4.62069 | opp_overlap 1904035 1904034 GGTCGACCTGAAAAA GCCCCGTG GTTTT CACGAGGC ATTTTTACACATCCA Shewmr7_1620 1904351 - 1904076 - | histone family protein DNA-binding protein Shewmr7_1622 1905752 - 1905450 - | hypothetical protein TERM 2361 1905782 - 1905820 + r 75 -9.1 -3.57406 | overlap 1905781 1905783 TCAATAAACAGTTTT ATTTGATTTAGCCATTT TTTTC AAATGGCTAAATCAGGG TGTTTATACTAAACG TERM 2362 1905783 - 1905819 + r 89 -12.6 -2.74122 | overlap 1905782 1905781 CAATAAACAGTTTTA TTTGATTTAGCCATTT TTTTC AAATGGCTAAATCAGG GTGTTTATACTAAAC Shewmr7_1623 1907847 - 1905856 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 2363 1906439 - 1906451 + g 70 -4.9 -4.65916 | opp_overlap 1906446 CCTGTATAGTATGCA TAACA ATT TGTTA TTTTATTACAATCAC Shewmr7_1624 1909752 - 1907848 - | hypothetical protein Shewmr7_1625 1910373 - 1910999 + | ECF subfamily RNA polymerase sigma-24 factor Shewmr7_1626 1911018 - 1913843 + | serine/threonine protein kinase TERM 2364 1913888 - 1913921 + T 100 -12 -4.16205 | opp_overlap 1913891 AGCGCTATTCTCTAA GTATCCACTTTTAA ACTTAA TTAAGAGTGGATAC TTTAATTTAATTATA Shewmr7_1627 1914872 - 1913964 - | ABC transporter related Shewmr7_1628 1915699 - 1914869 - | hypothetical protein Shewmr7_1629 1916461 - 1915793 - | hypothetical protein TERM 2365 1916008 - 1916032 + g 74 -8.5 -4.06678 | CACGCTTACCCGGCT CCCGTGGTAAC TGC GCTAGCACGGG TTTATCTCGCTCCAT TERM 2366 1916481 - 1916508 + r 100 -15 -3.29471 | opp_overlap 1916481, overlap 1916477 GCTCCAAAGAAAAAA GCATGGCTTTGT TATA ACAGAGCCATGC TTAATATCCTAGCGC TERM 2367 1916508 - 1916481 - R 100 -12.8 -5.63517 | opp_overlap 1916477 1916481 GCTCCAAAGAAAAAA GCATGGCTTTGT TATA ACAGAGCCATGC TTAATATCCTAGCGC Shewmr7_1630 1917480 - 1916641 - | hypothetical protein Shewmr7_1631 1917957 - 1918109 + | hypothetical protein TERM 2368 1919242 - 1919254 + G 74 -7.7 -4.24948 | TCTAAGTTCGGTTTA TCTGC GGC GCAGA TTTTAACTGTGGTAG TERM 2369 1920063 - 1920052 - g 71 -7.2 -4.04206 | TCAGGTTTAGACAAA GCGC CAGA GCGC CGCGCAGTGATGTTG Shewmr7_1632 1918570 - 1920483 + | arginine decarboxylase TERM 2370 1920498 - 1920533 + F 100 -14.2 -5.24531 | opp_overlap 1920503, overlap 1920503 ATATTGAGTGTGTTA AAAAAGTCAGCCTAGG GACA CTTAGGCTGACTTTTG TTTTTTATAGCCCGT TERM 2371 1920528 - 1920503 - f 100 -11.9 -5.0133 | opp_overlap 1920498 1920503 GAGTGTGTTAAAAAA GTCAGCCTAGG GACA CTTAGGCTGAC TTTTGTTTTTTATAG TERM 2372 1920503 - 1920528 + F 100 -14.1 -5.49579 | opp_overlap 1920503, overlap 1920498 GAGTGTGTTAAAAAA GTCAGCCTAGG GACA CTTAGGCTGAC TTTTGTTTTTTATAG TERM 2373 1920839 - 1920826 - g 80 -2.3 -5.40474 | AGGCGCGGAAAAAAA GCTTG AGAT CAGGC TCACACCCAAGCTGG Shewmr7_1633 1920800 - 1921735 + | S-adenosylmethionine decarboxylase TERM 2374 1921839 - 1921819 - f 73 -2.5 -5.15167 | opp_overlap 1921819, overlap 1921813 GATTATCAATAAAAA GCTAAGG TTAACTG CCTTGGC TTTTTTATTGGCGGC TERM 2375 1921819 - 1921839 + F 87 -5.4 -5.4505 | opp_overlap 1921819 1921813 GATTATCAATAAAAA GCTAAGGT TAACT GCCTTGGC TTTTTTATTGGCGGC Shewmr7_1634 1921955 - 1922593 + | pyridoxamine 5'-phosphate oxidase Shewmr7_1635 1922614 - 1923072 + | hypothetical protein Shewmr7_1636 1923219 - 1923794 + | YceI family protein Shewmr7_1637 1923955 - 1924311 + | hypothetical protein Shewmr7_1638 1924768 - 1925151 + | hypothetical protein Shewmr7_1639 1925342 - 1926307 + | hypothetical protein Shewmr7_1640 1928962 - 1926344 - | multi-sensor signal transduction histidine kinase TERM 2376 1926462 - 1926473 + g 74 -4.4 -4.76213 | overlap 1926455 ATGCAAGTCAGTGTG CCAA TACA TTGG TTTTGTTGCATTTCT TERM 2377 1928452 - 1928432 - G 91 -11.3 -4.3586 | GGATTTAGACCAAAA TATTTTCCC GAC GGGAAAATA GCGGGTCGGTCTATA TERM 2378 1929113 - 1929089 - R 100 -14.4 -4.71061 | opp_overlap 1929083 AGCGACAGCTAAAAA TGAGGCAGAC CTTAC GTCTGCCTCA TAAAGATTACTTATA Shewmr7_1641 1929647 - 1929120 - | disulphide bond formation protein DsbB TERM 2379 1929698 - 1929666 - R 72 -9.3 -3.15579 | opp_overlap 1929673 1929696, overlap 1929673 TGAACTCCGTATCAA CAAAAAACGCCCT CGAAGGT AGGGCGTTTTTTT GACTTTACTGAACTC TERM 2380 1929691 - 1929673 - R 95 -7.4 -5.5112 | opp_overlap 1929673, overlap 1929666 CGTATCAACAAAAAA CGCCCT CGAAGGT AGGGCG TTTTTTTGACTTTAC TERM 2381 1929673 - 1929691 + r 95 -7.4 -5.58209 | opp_overlap 1929666 1929673 CGTATCAACAAAAAA CGCCCT CGAAGGT AGGGCG TTTTTTTGACTTTAC nhaB 1931344 - 1929743 - | sodium/proton antiporter Shewmr7_1643 1931648 - 1932373 + | fatty acid metabolism regulator TERM 2382 1932428 - 1932395 - T 91 -12 -3.53091 | gap 1, opp_overlap 1932383 1932402, overlap 1932402 ATGCGCCTTGTTAAA CTAAAAAGCCGTTTC ATTGA GAAACGGCTTTTT-G CTTTTTAGTCAGTGA TERM 2383 1932402 - 1932422 + T 100 -11.2 -5.1971 | opp_overlap 1932395 1932402, overlap 1932383 TTGTTAAACTAAAAA GCCGTTTC ATTGA GAAACGGC TTTTTGCTTTTTAGT TERM 2384 1932422 - 1932402 - T 100 -11.2 -4.98531 | opp_overlap 1932383 1932402, overlap 1932395 TTGTTAAACTAAAAA GCCGTTTC ATTGA GAAACGGC TTTTTGCTTTTTAGT Shewmr7_1644 1933975 - 1932449 - | hypothetical protein TERM 2385 1933078 - 1933064 - G 71 -7.8 -3.98236 | AAACTCCATCATAAA GCGGTC GGT GACCAC GCCATCATCGTATAG TERM 2386 1933619 - 1933649 + g 73 -5.5 -4.72029 | overlap 1933621 GCCAAAACAGGCATG TGCCATCACCA AAGCCTGCA TGGTGATGGTG TTTTCTTCCATTAAA TERM 2387 1933621 - 1933647 + g 74 -8.1 -3.9716 | overlap 1933619 CAAAACAGGCATGTG CCATCACCA AAGCCTGCA TGGTGATGG TGTTTTCTTCCATTA Shewmr7_1645 1935259 - 1933985 - | hypothetical protein TERM 2388 1934389 - 1934399 + g 70 -2.4 -4.91712 | opp_overlap 1934389 GGTGGCGGATATAGA CCAC CTC GAGG TTTTTGTAGGTTCGG TERM 2389 1934678 - 1934698 + g 73 -3.3 -4.96773 | AAGCTCCGCCAGTTC TTGCTCTAA CTC TTTGAGTAA TTTCTTTTTACTTGC TERM 2390 1935274 - 1935301 + r 100 -10.7 -4.72272 | gap 1, opp_overlap 1935278, overlap 1935278 CCTCCCAAACCCCAG CGAAGGCTTTGG CAACA CCAAAGCC-TCG TTTTTAGTGAGCGCA TERM 2391 1935278 - 1935298 + r 81 -11.2 -3.28472 | opp_overlap 1935278, overlap 1935274 CCAAACCCCAGCGAA GGCTTTGG CAACA CCAAAGCC TCGTTTTTAGTGAGC TERM 2392 1935298 - 1935278 - R 86 -11.9 -3.08966 | opp_overlap 1935278 1935274 CCAAACCCCAGCGAA GGCTTTGGC AAC ACCAAAGCC TCGTTTTTAGTGAGC Shewmr7_1646 1937253 - 1935319 - | putative serine protein kinase, PrkA TERM 2393 1935346 - 1935369 + g 78 -3.8 -5.21709 | opp_overlap 1935323 1935346 1935349, overlap 1935349 1935350 ACGAACCCGTAAATA CCACTCAGAC AGGA GTCTGACTTG TTTTTTGGTATAGCC TERM 2394 1937388 - 1937367 - R 75 -2.3 -5.37171 | opp_overlap 1937380 1937380 1937383 1937386, overlap 1937380 1937381 AATATCAAATAAAAA CAATAACAA ATGA TTGCAATTG CAATTGTTGCACTTG TERM 2395 1937480 - 1937466 - R 100 -7.1 -5.66684 | opp_overlap 1937466 GAAGCTATAAAAAAA GAGCC ACTTG GGCTC TTTTTAAGGATGACT TERM 2396 1937466 - 1937480 + r 81 -7.1 -4.60041 | opp_overlap 1937466 GAAGCTATAAAAAAA GAGCC ACTTG GGCTC TTTTTAAGGATGACT Shewmr7_1647 1938089 - 1937505 - | superoxide dismutase Shewmr7_1648 1938316 - 1938648 + | glutaredoxin-like protein TERM 2397 1938706 - 1938682 - T 100 -14.4 -5.35721 | opp_overlap 1938682 ATAGAATAATAAAAA GCCGCTAAGT GAATA ACTTAGCGGC TTTTTTGTTGCCTAA TERM 2398 1938682 - 1938706 + T 100 -14.4 -5.4833 | opp_overlap 1938682 ATAGAATAATAAAAA GCCGCTAAGT GAATA ACTTAGCGGC TTTTTTGTTGCCTAA Shewmr7_1649 1940015 - 1938777 - | uracil-xanthine permease Shewmr7_1650 1940231 - 1941310 + | hypothetical protein TERM 2399 1941798 - 1941830 + G 71 -7.5 -3.97709 | overlap 1941797 CGCTGTGCGTTGGTG GTCAGCGGCCGCTCG GCG CCCGCGGATGCTGGC TTCTTGTTACCTGAT Shewmr7_1651 1941390 - 1942100 + | DNA replication initiation factor TERM 2400 1942145 - 1942177 + T 100 -13.6 -3.63744 | opp_overlap 1942150, overlap 1942150 ACACTTATTTCCACC TAAAACGCCTGATG TACCT CATCGGGCGTTTTG TATTTTAAGGCCAAA TERM 2401 1942172 - 1942150 - T 83 -9.1 -4.18494 | opp_overlap 1942145 1942150 TATTTCCACCTAAAA CGCCTGATG TACCT CATCGGGCG TTTTGTATTTTAAGG TERM 2402 1942150 - 1942172 + T 100 -11.3 -4.89567 | opp_overlap 1942150, overlap 1942145 TATTTCCACCTAAAA CGCCTGATG TACCT CATCGGGCG TTTTGTATTTTAAGG Shewmr7_1652 1943795 - 1942533 - | metal dependent phosphohydrolase TERM 2403 1942587 - 1942598 + g 70 -4.4 -4.63527 | overlap 1942583 TTCGCGCGGATTGAG GTAC TCGT GTAC TTTTTCGGGTAATGC TERM 2404 1943128 - 1943142 + g 76 -5.7 -4.6526 | opp_overlap 1943117 TTAAGCTCTGGTGAA GACCA AGGCG TGGTC TTTTTCAAAATTTGT Shewmr7_1653 1943912 - 1944607 + | prolyl 4-hydroxylase, alpha subunit Shewmr7_1654 1945974 - 1944625 - | periplasmic sensor signal transduction histidine kinase Shewmr7_1655 1946648 - 1945965 - | two component transcriptional regulator Shewmr7_1656 1947161 - 1946814 - | hypothetical protein TERM 2405 1947121 - 1947109 - G 76 -3.3 -5.1925 | TCATAACGTAAAAAA TGCGC ACC GAGCA GCCAAAAGGCGACAA TERM 2406 1947275 - 1947259 - R 100 -12.3 -5.64304 | opp_overlap 1947259 TAAGACAACAAAAAA GCCCAAC AGA GTTGGGC TTAGATAGAAGATAC TERM 2407 1947259 - 1947275 + r 93 -12.3 -3.05816 | opp_overlap 1947259 TAAGACAACAAAAAA GCCCAAC AGA GTTGGGC TTAGATAGAAGATAC Shewmr7_1657 1948632 - 1947319 - | sodium:dicarboxylate symporter TERM 2408 1952251 - 1952269 + G 71 -7.5 -4.02334 | ATAGAAAAAGAGCCG CAAACAG TTTAT CTGTTTG TTTCTGATGTAAATA Shewmr7_1658 1948852 - 1952526 + | Ig domain-containing protein TERM 2409 1952583 - 1952556 - T 70 -9.3 -2.76171 | opp_overlap 1952556, overlap 1952561 ATTCACTTAACAGTA TTAAAGGCGAT CTTAGC ATCGCCTCTAA TTTTTGTAGTGTGAG TERM 2410 1952556 - 1952583 + T 89 -7.1 -4.95155 | opp_overlap 1952556 1952561 ATTCACTTAACAGTA TTAAAGGCGAT CTTAGC ATCGCCTCTAA TTTTTGTAGTGTGAG Shewmr7_1659 1953941 - 1952607 - | succinylarginine dihydrolase TERM 2411 1953069 - 1953095 + g 71 -6.6 -4.2573 | overlap 1953061 TTTGGCCGTCGGAAC CTCGATAAAGAA TAA TTCGGTATCGAG TTTTCGCCTTATTTC TERM 2412 1955218 - 1955207 - g 70 -4.4 -4.63218 | TTGGGGTGAAGAAAA CCAT GATG ATGG CGCAGCGTTTGTACG TERM 2413 1956335 - 1956325 - g 70 -3.2 -4.7497 | overlap 1956327 CTTATCGACGAAAAA CGCA AAC TGCA TGTTTGTGGTAATAA Shewmr7_1660 1954225 - 1956909 + | DNA topoisomerase I TERM 2414 1956948 - 1956970 + T 100 -12 -4.87592 | opp_overlap 1956948 1956949, overlap 1956949 TTGTGTATTTGCAAA TGGGCTCACT TTA AGTGGGCCCG TTTTGTTATCTATGC TERM 2415 1956969 - 1956949 - T 77 -11.1 -2.74144 | opp_overlap 1956948 1956949, overlap 1956948 TGTGTATTTGCAAAT GGGCTCACT TTA AGTGGGCCC GTTTTGTTATCTATG TERM 2416 1956949 - 1956969 + T 100 -13.3 -3.5147 | opp_overlap 1956949 1956948, overlap 1956948 TGTGTATTTGCAAAT GGGCTCACT TTA AGTGGGCCC GTTTTGTTATCTATG TERM 2417 1957093 - 1957061 - T 93 -13.7 -2.74563 | opp_overlap 1957068 1957069, overlap 1957069 GGTACATCCTAAGCA TAAAAAAACCAAGTC ACT GACTTGGCTTTCTTA TCGGTTAATCTAGTT TERM 2418 1957068 - 1957086 + T 75 -7.4 -4.35604 | opp_overlap 1957061 1957069, overlap 1957069 CCTAAGCATAAAAAA ACCAAGTC ACT GACTTGGC TTTCTTATCGGTTAA TERM 2419 1957085 - 1957069 - T 100 -10.9 -5.71983 | opp_overlap 1957068 1957069, overlap 1957061 CTAAGCATAAAAAAA CCAAGTC ACT GACTTGG CTTTCTTATCGGTTA TERM 2420 1957069 - 1957085 + T 79 -10.9 -3.20639 | opp_overlap 1957069 1957061, overlap 1957068 CTAAGCATAAAAAAA CCAAGTC ACT GACTTGG CTTTCTTATCGGTTA Shewmr7_1661 1957905 - 1957126 - | hypothetical protein TERM 2421 1957191 - 1957206 + g 74 -4.6 -4.83169 | overlap 1957193 TTTTGGATTTAGGTG CGCTCG GAGC CGAGAG TTTTTGTGCACCCAT cysB 1958133 - 1959107 + | transcriptional regulator CysB TERM 2422 1959153 - 1959135 - T 100 -10.3 -5.33331 | opp_overlap 1959135 CAAACACAATAAAAA TGCCGCA ATAGA TGCGGCA TTTCTTTATGAGTAT TERM 2423 1959135 - 1959153 + T 100 -10.3 -4.58085 | opp_overlap 1959135 CAAACACAATAAAAA TGCCGCA ATAGA TGCGGCA TTTCTTTATGAGTAT Shewmr7_1663 1959850 - 1959188 - | two component LuxR family transcriptional regulator TERM 2424 1959326 - 1959310 - G 72 -8 -3.85698 | opp_overlap 1959309 1959310 1959321 TGGTGGCCTCAGAAA CGCCTA AGTCA TAGGCG ATTTGCTTATTGAGT TERM 2425 1960042 - 1960017 - R 73 -5.4 -4.63592 | TTTGAAGAAAAATAA GCCCCAAAAC CAGAGT GTTTAAGGGC TAGAGTGCGTTATTG Shewmr7_1664 1960502 - 1960071 - | thioesterase superfamily protein TERM 2426 1960611 - 1960637 + r 89 -12.4 -2.81208 | opp_overlap 1960616, overlap 1960616 GGTAAAACGAAAAGA AAAAAGGCTTCC AGT GGAAGCCTTTTC ATATTTTCAATCGAC TERM 2427 1960616 - 1960632 + r 100 -12.3 -4.55826 | opp_overlap 1960616, overlap 1960611 AACGAAAAGAAAAAA GGCTTCC AGT GGAAGCC TTTTCATATTTTCAA TERM 2428 1960632 - 1960616 - R 100 -12.3 -5.85244 | opp_overlap 1960611 1960616 AACGAAAAGAAAAAA GGCTTCC AGT GGAAGCC TTTTCATATTTTCAA Shewmr7_1665 1961717 - 1960653 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2429 1960766 - 1960784 + g 85 -7.4 -4.90013 | opp_overlap 1960768, overlap 1960768 TTTGGCCGTAACACA GAGGTTGA CCC TCAACCAC TTTTTGATTGCCTTC TERM 2430 1961120 - 1961157 + g 71 -5.5 -4.56597 | overlap 1961122 CTTTTGCTGCGCGCA CCGCATCGACGGCGATA TTAA TATTGCCATCGGTACCG TTTTTAAAGCCAACG TERM 2431 1961874 - 1961862 - R 70 -7.7 -3.61178 | opp_overlap 1961862 CCTATTTAGCCTAAA TCGAG GGA CTCGA TTGCTTCGTTCGAAA Shewmr7_1666 1962711 - 1961899 - | hypothetical protein TERM 2432 1963709 - 1963685 - H 78 -7.2 -4.56597 | opp_overlap 1963662, overlap 1963662 1963656 GTTGCTGCTGAAAAA CGTCGTCAAT TCTCT ATCAACGACG CCGAAGTGATGGAAT TERM 2433 1964643 - 1964632 - H 78 -5.8 -4.75472 | opp_overlap 1964631 1964642, overlap 1964627 GCCAGAGGAAGAAAA CCCA ATGT TGGG CTTCCGTGGTGCGAG TERM 2434 1965237 - 1965252 + H 100 -10.4 -6.28967 | opp_overlap 1965237 AAAGGTGTTAAAAAA GCCGCT TTTT AGCGGC TTTTTTTTGTTTATA TERM 2435 1965252 - 1965237 - H 100 -10.4 -5.03747 | opp_overlap 1965237 AAAGGTGTTAAAAAA GCCGCT TTTT AGCGGC TTTTTTTTGTTTATA TERM 2436 1967593 - 1967571 - g 74 -7.1 -4.29302 | gap 1, opp_overlap 1967568 1967585, overlap 1967568 CCGACATTAAAACAA CGACTCG-AT GGTC ATGCGAGTCG CGGTTATGATCTGGC Shewmr7_1668 1965303 - 1968344 + | FAD linked oxidase domain-containing protein TERM 2437 1968402 - 1968417 + F 100 -9 -5.0925 | opp_overlap 1968402 CCATGCCACACTAAA CCAGTC GTCA GACTGG TTTTTACTTTTAGGG TERM 2438 1968417 - 1968402 - f 78 -9 -3.83998 | opp_overlap 1968402 CCATGCCACACTAAA CCAGTC GTCA GACTGG TTTTTACTTTTAGGG Shewmr7_1669 1968439 - 1968930 + | hypothetical protein Shewmr7_1670 1969069 - 1969500 + | MarR family transcriptional regulator TERM 2439 1970197 - 1970178 - g 74 -11.4 -3.10796 | opp_overlap 1970176 TGTCATTATCGAATA CCGCGAAG GTAC CCTCGCGG GCTCTGCTGTGCCGA Shewmr7_1671 1969786 - 1973574 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 2440 1973627 - 1973593 - T 100 -14.4 -3.05384 | opp_overlap 1973598, overlap 1973598 GCTTTTGTGAGCCAA TAAAACCGCGACTAGC CAC GCTAGTGGCGGTTTTT ATTTGCCAGTTATCA TERM 2441 1973598 - 1973622 + T 100 -14.3 -5.27938 | opp_overlap 1973593 1973598 TGTGAGCCAATAAAA CCGCGACTAGC CAC GCTAGTGGCGG TTTTTATTTGCCAGT TERM 2442 1973622 - 1973598 - T 100 -14.3 -4.67982 | opp_overlap 1973598, overlap 1973593 TGTGAGCCAATAAAA CCGCGACTAGC CAC GCTAGTGGCGG TTTTTATTTGCCAGT Shewmr7_1672 1973991 - 1973644 - | hypothetical protein TERM 2443 1974177 - 1974149 - R 100 -15.3 -3.37464 | opp_overlap 1974173, overlap 1974151 TGAGGAAGGTGAGAA GAGGCGGACAACG AGT CGTTGCCCGCCTA AAGCGTGATTAGGCT TERM 2444 1974175 - 1974151 - R 100 -17.9 -3.25459 | opp_overlap 1974173, overlap 1974149 AGGAAGGTGAGAAGA GGCGGACAACG AGT CGTTGCCCGCC TAAAGCGTGATTAGG Shewmr7_1673 1975220 - 1974186 - | leucine dehydrogenase TERM 2445 1975275 - 1975249 - H 100 -9.5 -4.87592 | overlap 1975250 CTATACACAATAAAA CGTCGATGGAA TCACT TCCCATCGACA GCTCGTTATATTTAT TERM 2446 1975274 - 1975250 - H 83 -10.8 -3.5147 | overlap 1975249 TATACACAATAAAAC GTCGATGGAA TCACT TCCCATCGAC AGCTCGTTATATTTA TERM 2447 1975374 - 1975391 + H 80 -6.3 -4.8048 | CAATCTAGCTTTCCA CTTTACG TAAA CGTAAGG TTTTTAGTGTGAAAC Shewmr7_1674 1975500 - 1975958 + | hypothetical protein TERM 2448 1976004 - 1975977 - T 100 -11.4 -4.17023 | opp_overlap 1975978 1975982, overlap 1975978 1975982 CGAATTAGTTTAAAA GTAAAGGCACTC AGTT GAGTGCCTTTAT TGTTTTGGGTGACGC TERM 2449 1975978 - 1976003 + T 100 -14.9 -4.21812 | opp_overlap 1975977 1975978 1975982, overlap 1975982 GAATTAGTTTAAAAG TAAAGGCACTC AGTT GAGTGCCTTTA TTGTTTTGGGTGACG TERM 2450 1976003 - 1975978 - T 100 -14.9 -3.09732 | opp_overlap 1975978 1975982, overlap 1975977 1975982 GAATTAGTTTAAAAG TAAAGGCACTC AGTT GAGTGCCTTTA TTGTTTTGGGTGACG TERM 2451 1975999 - 1975982 - T 100 -11.3 -4.20806 | opp_overlap 1975982 1975978, overlap 1975978 1975977 TAGTTTAAAAGTAAA GGCACTC AGTT GAGTGCC TTTATTGTTTTGGGT TERM 2452 1975982 - 1975999 + T 100 -11.3 -4.68601 | opp_overlap 1975978 1975977 1975982, overlap 1975978 TAGTTTAAAAGTAAA GGCACTC AGTT GAGTGCC TTTATTGTTTTGGGT Shewmr7_1675 1977194 - 1976055 - | cupin 4 family protein TERM 2453 1977231 - 1977207 - R 100 -11.5 -5.04385 | opp_overlap 1977207 CATAGTGTCAAAAAA GGCGACTACAT CGA ATGTAACCGCC TTAATCCTTATTTAT Shewmr7_1676 1978687 - 1977317 - | adenylosuccinate lyase Shewmr7_1677 1979334 - 1978717 - | hypothetical protein trmU 1980456 - 1979338 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2454 1979870 - 1979885 + g 89 -2.5 -5.82388 | CTGTCCTTCTTATCA TGGGT AATTAA GCCCA TTTTTTTTGCGATTT TERM 2455 1979904 - 1979914 + g 71 -6.8 -4.19238 | overlap 1979893 1979901 TTTTTGCGATTTCAC GCAC TTC GTGC TTTTCGAGTTCACCA Shewmr7_1679 1981168 - 1980677 - | NUDIX hydrolase TERM 2456 1980927 - 1980900 - G 74 -2.6 -5.14965 | overlap 1980915 1980919 ACTTGTACGAAAAAA GTAAAGCGCACA AAAG CGAGTGCTTCAC TGGCACTAAACTGAT TERM 2457 1980931 - 1980915 - G 76 -6.5 -4.44974 | overlap 1980900 1980919 GTAAAGCGCACAAAA GCGAGTG CTT CACTGGC ACTAAACTGATAAAT Shewmr7_1680 1982033 - 1981236 - | ribosomal large subunit pseudouridine synthase E TERM 2458 1981793 - 1981776 - G 71 -7.7 -4.00042 | opp_overlap 1981772, overlap 1981761 CGGCTTATTAAATAA GACGATC ATCG GATCGCC TTGGGGTTTTGTACG TERM 2459 1981939 - 1981965 + g 79 -13 -3.06915 | overlap 1981961 GTCTTCTTGTTACTT GCGCGGCTATCA GCT TGATTGTCGCGC TTAAATGAAGTGCGT Shewmr7_1681 1982384 - 1984609 + | isocitrate dehydrogenase, NADP-dependent TERM 2460 1984669 - 1984701 + F 100 -20.1 -3.63744 | opp_overlap 1984674, overlap 1984674 ACACTTATTTCCATC TAAAACGCCCGATGA ACC TCATCGGGCGTTTTG TATTTTAAGGCCAAA TERM 2461 1984696 - 1984674 - f 100 -17.8 -4.18494 | opp_overlap 1984669 1984674 TATTTCCATCTAAAA CGCCCGATGA ACC TCATCGGGCG TTTTGTATTTTAAGG TERM 2462 1984674 - 1984696 + F 100 -17.8 -4.89567 | opp_overlap 1984674, overlap 1984669 TATTTCCATCTAAAA CGCCCGATGA ACC TCATCGGGCG TTTTGTATTTTAAGG Shewmr7_1683 1985065 - 1985379 + | small multidrug resistance protein Shewmr7_1684 1985608 - 1987134 + | 6-phosphogluconate dehydrogenase TERM 2463 1987150 - 1987165 + F 100 -10.4 -5.27923 | opp_overlap 1987149 1987140 1987150 ATAAATCGTACAAAG GCCCCT AAAT AGGGGC TTTTTTATCGGGTTA TERM 2464 1987165 - 1987150 - f 76 -10.4 -2.97051 | opp_overlap 1987150, overlap 1987149 1987140 ATAAATCGTACAAAG GCCCCT AAAT AGGGGC TTTTTTATCGGGTTA Shewmr7_1685 1987679 - 1989796 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 2465 1990089 - 1990099 + G 71 -6.8 -4.25104 | CTAAAGCCTGGTGTG TCGG CTG CCGA TTTTGCTAAGGCCCA Shewmr7_1686 1989807 - 1990271 + | hypothetical protein TERM 2466 1990296 - 1990317 + F 100 -13.1 -3.86266 | opp_overlap 1990296 1990300, overlap 1990300 TAGGTTAACATTGAA TAAAGGGCC GCAA GGCCCTTTA TTATTGTGGTGGTCT TERM 2467 1990317 - 1990296 - f 95 -13.1 -3.19026 | opp_overlap 1990296 1990300, overlap 1990300 TAGGTTAACATTGAA TAAAGGGCC GCAA GGCCCTTTA TTATTGTGGTGGTCT TERM 2468 1990300 - 1990313 + F 95 -9.5 -4.53419 | opp_overlap 1990296 1990300, overlap 1990296 TTAACATTGAATAAA GGGCC GCAA GGCCC TTTATTATTGTGGTG TERM 2469 1990313 - 1990300 - f 88 -9.5 -4.254 | opp_overlap 1990300 1990296, overlap 1990296 TTAACATTGAATAAA GGGCC GCAA GGCCC TTTATTATTGTGGTG Shewmr7_1687 1990552 - 1991262 + | hypothetical protein Shewmr7_1688 1991418 - 1991735 + | hypothetical protein Shewmr7_1689 1992712 - 1991813 - | LysR family transcriptional regulator TERM 2470 1992838 - 1992812 - H 95 -13.8 -2.78384 | opp_overlap 1992812 TTCCGCCTTATGACA GTAGTGGGCTCA AAA TGAGTCCACTAC TTTGCGTTTAGGGCG TERM 2471 1992812 - 1992838 + H 100 -16 -3.84451 | opp_overlap 1992812 TTCCGCCTTATGACA GTAGTGGGCTCA AAA TGAGTCCACTAC TTTGCGTTTAGGGCG Shewmr7_1690 1992914 - 1993393 + | hypothetical protein Shewmr7_1691 1993464 - 1994273 + | extradiol ring-cleavage dioxygenase III subunit B TERM 2472 1994334 - 1994287 - T 100 -15.8 -2.73619 | opp_overlap 1994292, overlap 1994292 AATCAGCCCCTAAAG CAAAAGGTTCGTCATGTTGCGT ATTA ATGCATCATGACGAACCTTTTT GTATTTTAAGCCTTG TERM 2473 1994329 - 1994292 - T 100 -15.7 -4.54727 | opp_overlap 1994292, overlap 1994287 GCCCCTAAAGCAAAA GGTTCGTCATGTTGCGT ATTA ATGCATCATGACGAACC TTTTTGTATTTTAAG TERM 2474 1994292 - 1994329 + T 100 -17.9 -5.28983 | opp_overlap 1994292 1994287 GCCCCTAAAGCAAAA GGTTCGTCATGTTGCGT ATTA ATGCATCATGACGAACC TTTTTGTATTTTAAG Shewmr7_1692 1995302 - 1994427 - | 1,4-dihydroxy-2-naphtoate prenyltransferase TERM 2475 1994956 - 1994942 - G 71 -7.8 -4.08216 | overlap 1994912 1994911 CGAGGGCGCCTAAAA TGGCCG CCG CAGCCA AAATCGCAATCGGCC TERM 2476 1996260 - 1996272 + G 83 -3.3 -5.40004 | AAACACTTAGCCCCA GCGAT TCA ACCGC TTTTTTCCTTTGATA Shewmr7_1693 1995630 - 1996556 + | short-chain dehydrogenase/reductase SDR Shewmr7_1694 1996678 - 1997544 + | acyl-CoA thioesterase II TERM 2477 1997692 - 1997670 - g 73 -2.7 -5.03314 | gap 1, overlap 1997671 GCTATTTGGAAAAAA TTCTCCTGCC TCCA GGCAGT-GAA ATTACCATTGCGATT Shewmr7_1695 1997546 - 1997950 + | hypothetical protein TERM 2478 1998004 - 1998018 + T 95 -7.1 -5.55769 | opp_overlap 1998004 GCATTTTATCGAAAA GGGGA GTTAA TCCCC TTTTTTATTATGCGG TERM 2479 1998018 - 1998004 - T 73 -7.1 -4.1899 | opp_overlap 1998004 GCATTTTATCGAAAA GGGGA GTTAA TCCCC TTTTTTATTATGCGG Shewmr7_1696 1998916 - 1998035 - | LysR family transcriptional regulator TERM 2480 1999367 - 1999385 + G 71 -5.9 -4.29928 | overlap 1999381 CCTGATCCTCTCGGT CACCAGC TTTTC GCTGGCG TTTTCGCTGTTAATT Shewmr7_1697 1999128 - 2000438 + | major facilitator transporter TERM 2481 2000540 - 2000569 + F 71 -10.1 -2.63723 | overlap 2000539 TGATTCTCGTTCTCA TTCGGTAACTCAT TCAA ATGAGATGCCGAA ATTCATTGATAACGA Shewmr7_1698 2000817 - 2002370 + | MATE efflux family protein TERM 2482 2002430 - 2002384 - T 89 -7.5 -4.92363 | gap 1, opp_overlap 2002393 2002399, overlap 2002393 AAAGAGTCATAAAAA CTGATAAAACATAAAGGCCACT GAAA AGTGGCCTTTATGTTTGG-CAT ATCCGCATTCACGCG TERM 2483 2002393 - 2002422 + T 100 -18.1 -3.63627 | opp_overlap 2002393 2002384, overlap 2002399 TAAAAACTGATAAAA CATAAAGGCCACT GAAA AGTGGCCTTTATG TTTGGCATATCCGCA TERM 2484 2002422 - 2002393 - T 100 -18.1 -4.56887 | opp_overlap 2002393 2002399, overlap 2002384 TAAAAACTGATAAAA CATAAAGGCCACT GAAA AGTGGCCTTTATG TTTGGCATATCCGCA TERM 2485 2002399 - 2002416 + T 100 -11.3 -4.33928 | opp_overlap 2002393 2002384, overlap 2002393 CTGATAAAACATAAA GGCCACT GAAA AGTGGCC TTTATGTTTGGCATA Shewmr7_1699 2002715 - 2002497 - | hypothetical protein Shewmr7_1700 2003023 - 2003334 + | hypothetical protein TERM 2486 2003733 - 2003719 - g 70 -2.8 -4.75404 | AAAGCGTACGAAAAA CAGTAT CAA ATGCTG ATCACTACCTTGCCT TERM 2487 2004032 - 2004018 - g 74 -4.2 -4.77079 | CACAGAGGAAGAAAA GCAGGA ATA TCTTGC TCAAGTGAATGCTAA TERM 2488 2004237 - 2004269 + G 76 -6.5 -4.56597 | gap 1, opp_overlap 2004237 TCAGGAAGTATTTAA TCTGTTTGCTTATG ATGTTG CA-GAGCAAACAGA TTTTTCAAAGGGAAA Shewmr7_1701 2003362 - 2004456 + | hypothetical protein TERM 2489 2004493 - 2004470 - T 100 -15.4 -4.67755 | opp_overlap 2004470 2004474, overlap 2004474 AGATTTATCTAAAAA GAAAGGCTGC AATT GCAGCCTTTC TTTTTATGAAGCTAT TERM 2490 2004470 - 2004493 + T 100 -15.4 -4.84761 | opp_overlap 2004470 2004474, overlap 2004474 AGATTTATCTAAAAA GAAAGGCTGC AATT GCAGCCTTTC TTTTTATGAAGCTAT TERM 2491 2004474 - 2004489 + T 100 -10.4 -4.96501 | opp_overlap 2004474 2004470, overlap 2004470 TTATCTAAAAAGAAA GGCTGC AATT GCAGCC TTTCTTTTTATGAAG TERM 2492 2004489 - 2004474 - T 100 -10.4 -4.89063 | opp_overlap 2004470 2004474, overlap 2004470 TTATCTAAAAAGAAA GGCTGC AATT GCAGCC TTTCTTTTTATGAAG Shewmr7_1702 2007561 - 2004505 - | acriflavin resistance protein TERM 2493 2005693 - 2005703 + g 70 -2.4 -5.011 | opp_overlap 2005688, overlap 2005688 GGAGAATTTAGGAAA ACCG CTG CGGA TTTTCTTCTTTAACT TERM 2494 2006820 - 2006841 + g 82 -10.9 -3.8766 | CGTCATCTAAGGTCA GCCCTGGTA ATAA TACTAGGGC TTTAATGTCCTCTAA Shewmr7_1703 2010821 - 2007558 - | acriflavin resistance protein TERM 2495 2008813 - 2008825 + g 70 -10.5 -2.90688 | overlap 2008816 2008822 CGCCCCCAGTTTTCA CCGCC TCT GGCGG TATCTGAGGTCATTA TERM 2496 2009313 - 2009323 + g 70 -4.6 -4.731 | CTTAGTTGTGGGTTT CTCC TTC GGGG TTTTCTTGATGAGTT Shewmr7_1704 2011910 - 2010834 - | RND family efflux transporter MFP subunit TERM 2497 2012235 - 2012249 + r 100 -12.8 -4.431 | opp_overlap 2012235 AATGCCAATAAAAAA GCGCCC AGA GGGCGC TTTTATCGATAAATG TERM 2498 2012249 - 2012235 - R 100 -12.8 -5.4756 | opp_overlap 2012235 AATGCCAATAAAAAA GCGCCC AGA GGGCGC TTTTATCGATAAATG gltA 2013555 - 2012269 - | type II citrate synthase TERM 2499 2012604 - 2012623 + g 74 -4.3 -4.82901 | AGGTTTCACGCATCA CTTTGGC ACGTGG GTCAAAG TTTTTGTAAACACGG TERM 2500 2013751 - 2013736 - H 80 -2.6 -5.42862 | ATATCCTTAAAAAAA CAAAAT TTGC ATTCTG TGATGTTTGTATTTG TERM 2501 2013979 - 2013966 - H 93 -2.3 -6.19302 | overlap 2013967 2013968 ACATAACAAAAAAAA TGCTC AATG GAGCT GAGTGAGCAGAACGT TERM 2502 2013978 - 2013967 - H 70 -5.8 -4.27921 | overlap 2013966 2013968 CATAACAAAAAAAAT GCTC AATG GAGC TGAGTGAGCAGAACG Shewmr7_1706 2013972 - 2014367 + | succinate dehydrogenase subunit C Shewmr7_1707 2014361 - 2014708 + | succinate dehydrogenase subunit D sdhA 2014709 - 2016475 + | succinate dehydrogenase flavoprotein subunit sdhB 2016487 - 2017194 + | succinate dehydrogenase iron-sulfur subunit TERM 2503 2017238 - 2017266 + F 100 -11.1 -4.65446 | opp_overlap 2017230 2017240, overlap 2017230 AATATAGCTCTCGAA GAGTCACTTTCTG GTA TAGAAGGTGGCTC TTTTGTGTATGTAAT kgd 2017408 - 2020227 + | alpha-ketoglutarate decarboxylase TERM 2504 2021328 - 2021311 - g 73 -9.1 -3.74872 | ATGCACGCCATTAAA GACCGCC CAAT GGCAGTC AATGGTCAGGTTGAA Shewmr7_1711 2020276 - 2021472 + | 2-oxoglutarate dehydrogenase E2 component TERM 2505 2021534 - 2021562 + F 77 -8.2 -3.91352 | gap 1, opp_overlap 2021531, overlap 2021540 GAGTCAGACATACCC TCGTGACTGGCCC CGTG GGGCCAGTTG-GA TTTGATTAGAAGTAT TERM 2506 2021540 - 2021557 + F 95 -12.7 -3.33399 | opp_overlap 2021531, overlap 2021534 GACATACCCTCGTGA CTGGCCC CGTG GGGCCAG TTGGATTTGATTAGA sucC 2021592 - 2022758 + | succinyl-CoA synthetase subunit beta Shewmr7_1713 2022758 - 2023630 + | succinyl-CoA synthetase (ADP-forming) alpha subunit TERM 2507 2023667 - 2023653 - f 100 -12.8 -4.43213 | opp_overlap 2023653 GTTAACACACGAAAA GGCGCC TAA GGCGCC TTTTTTATTGCGTGT TERM 2508 2023653 - 2023667 + F 100 -12.8 -5.49234 | opp_overlap 2023653 GTTAACACACGAAAA GGCGCC TAA GGCGCC TTTTTTATTGCGTGT TERM 2509 2023896 - 2023920 + F 73 -5.6 -4.55661 | TACTTAATTACCACG CGATTGCGGC ACTTA GCTGCGAGCG TATTTTTTTATTGGT TERM 2510 2024076 - 2024055 - g 75 -8.7 -3.93984 | opp_overlap 2024054 2024057 2024062 AAATCGATTTAGAAA GACTCGAGC GTCT GCTGGAGTC ATTACCTGCGAACGC Shewmr7_1714 2024012 - 2024419 + | GreA/GreB family elongation factor TERM 2511 2024398 - 2024418 + F 74 -10.5 -2.62656 | overlap 2024401 GTATCAGCCAGAGCG TAGCGGTGA CTT TCACCGTTA ATTATCGCTGGATTT TERM 2512 2024401 - 2024415 + F 78 -10 -3.45945 | overlap 2024398 TCAGCCAGAGCGTAG CGGTGA CTT TCACCG TTAATTATCGCTGGA Shewmr7_1715 2024467 - 2024964 + | GCN5-related N-acetyltransferase TERM 2513 2024976 - 2025023 + T 79 -10.9 -2.96899 | gap 1, opp_overlap 2024991, overlap 2024991 CTAACTGTGCCCGAG CATTTC-AATAAAAAACCAGCC TAGAT GGCTGGTTTTTTATTAGGCGTG TCTGGTTAATTGAGA TERM 2514 2024991 - 2025007 + T 100 -9.4 -5.45652 | opp_overlap 2024991, overlap 2024976 CATTTCAATAAAAAA CCAGCC TAGAT GGCTGG TTTTTTATTAGGCGT TERM 2515 2025007 - 2024991 - T 100 -9.4 -5.46657 | opp_overlap 2024991 2024976 CATTTCAATAAAAAA CCAGCC TAGAT GGCTGG TTTTTTATTAGGCGT fur 2025492 - 2025061 - | ferric uptake regulator Shewmr7_1717 2025749 - 2026489 + | NAD-dependent deacetylase Shewmr7_1718 2026492 - 2026956 + | hypothetical protein Shewmr7_1719 2027193 - 2027555 + | hypothetical protein TERM 2516 2027721 - 2027708 - g 76 -8.1 -4.26076 | CTATGTCTACGAAAA CCGTC AACT GACGG TCACTGAGATTAACA TERM 2517 2028371 - 2028392 + G 74 -4.5 -4.7497 | AATGCCACACAGTCA GTTTATCTT CGAT AAGTTAAAC TTTTTGCTCGATGCC Shewmr7_1720 2027682 - 2028629 + | magnesium and cobalt transport protein CorA TERM 2518 2028667 - 2028681 + T 100 -11.4 -5.4756 | opp_overlap 2028667 TGAGATACCCCAAAA CCGGAG AGA CTCCGG TTTTTTATTGGACTT TERM 2519 2028681 - 2028667 - T 100 -11.4 -4.18401 | opp_overlap 2028667 TGAGATACCCCAAAA CCGGAG AGA CTCCGG TTTTTTATTGGACTT TERM 2520 2028741 - 2028760 + T 100 -13.6 -4.23892 | opp_overlap 2028741 ATCGCCCAATAAAAA GGCAGGGA TAAA TCCCTGCC TTTTAGATCATTGGC TERM 2521 2028760 - 2028741 - T 100 -13.6 -5.06816 | opp_overlap 2028741 ATCGCCCAATAAAAA GGCAGGGA TAAA TCCCTGCC TTTTAGATCATTGGC Shewmr7_1721 2028993 - 2028787 - | cold-shock DNA-binding protein family protein Shewmr7_1722 2029187 - 2029495 + | ATP-dependent Clp protease adaptor protein ClpS TERM 2522 2029790 - 2029766 - g 86 -11.5 -3.99592 | opp_overlap 2029770, overlap 2029770 ATGGATGATGATAAA GAAACCCAACC GAC GCTTGGGTTTC AGCGGGTGCTGCAAC TERM 2523 2029786 - 2029770 - g 79 -6.5 -4.59944 | opp_overlap 2029770, overlap 2029766 ATGATGATAAAGAAA CCCAACC GAC GCTTGGG TTTCAGCGGGTGCTG Shewmr7_1723 2029538 - 2031805 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 2524 2031852 - 2031823 - T 95 -12.3 -3.29324 | opp_overlap 2031823 2031829, overlap 2031829 TCTAGCTAAACCCAA TAAAAATGGCTGC AATT GCAGCCATTTTTC TGATCTTACGCCAAC TERM 2525 2031823 - 2031852 + T 89 -12.3 -2.73875 | opp_overlap 2031823 2031829, overlap 2031829 TCTAGCTAAACCCAA TAAAAATGGCTGC AATT GCAGCCATTTTTC TGATCTTACGCCAAC TERM 2526 2031829 - 2031846 + T 100 -11.3 -4.98436 | opp_overlap 2031823 2031829, overlap 2031823 TAAACCCAATAAAAA TGGCTGC AATT GCAGCCA TTTTTCTGATCTTAC TERM 2527 2031846 - 2031829 - T 100 -11.3 -5.16151 | opp_overlap 2031829 2031823, overlap 2031823 TAAACCCAATAAAAA TGGCTGC AATT GCAGCCA TTTTTCTGATCTTAC TERM 2528 2031875 - 2031889 + T 100 -12.8 -4.62069 | opp_overlap 2031875 ACGCCAACAAAAAAA CCCGGC CTC GCCGGG TTTTTCAACTAAAGG TERM 2529 2031889 - 2031875 - T 100 -12.8 -5.80364 | opp_overlap 2031875 ACGCCAACAAAAAAA CCCGGC CTC GCCGGG TTTTTCAACTAAAGG Shewmr7_1724 2032129 - 2031911 - | translation initiation factor 1 Shewmr7_1725 2032928 - 2032212 - | arginyl-tRNA-protein transferase aat 2033628 - 2032918 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 2530 2033116 - 2033128 + g 70 -9.1 -3.52204 | CAATAACAACATGGC CGCCT TAG AGGCG TTGGTTTCACGGTGG Shewmr7_1727 2033683 - 2034153 + | 17 kDa surface antigen Shewmr7_1728 2034214 - 2034966 + | hypothetical protein TERM 2531 2035016 - 2035000 - T 100 -13.7 -4.87133 | opp_overlap 2035000 2034993 ATCTTGCAAACAAAA GGCGAGC CAT GCTCGCC TTCGTCTTATATAAA TERM 2532 2035000 - 2035016 + T 100 -13.7 -3.44443 | opp_overlap 2035000, overlap 2034993 ATCTTGCAAACAAAA GGCGAGC CAT GCTCGCC TTCGTCTTATATAAA Shewmr7_1729 2036000 - 2035044 - | auxin efflux carrier TERM 2533 2035464 - 2035446 - G 79 -7.4 -4.57353 | overlap 2035449 CGCCAGCAGATAAAA CAGCATGC CGA GCATGATG GCAATGATCAGCGGG TERM 2534 2036146 - 2036176 + r 90 -11.2 -3.92542 | opp_overlap 2036149 2036152, overlap 2036149 2036152 GATGTTTTTACCAAC AAATAAGGCCGCAT TAA ATGCGGCCTTATGC TTATTTACCAGTAGC TERM 2535 2036149 - 2036173 + r 100 -17.3 -3.02639 | opp_overlap 2036149 2036152, overlap 2036146 2036152 GTTTTTACCAACAAA TAAGGCCGCAT TAA ATGCGGCCTTA TGCTTATTTACCAGT TERM 2536 2036173 - 2036149 - R 100 -17.3 -4.24342 | opp_overlap 2036146 2036149 2036152, overlap 2036152 GTTTTTACCAACAAA TAAGGCCGCAT TAA ATGCGGCCTTA TGCTTATTTACCAGT TERM 2537 2036170 - 2036152 - R 100 -14.6 -4.24413 | opp_overlap 2036152 2036149 2036146, overlap 2036149 TTTACCAACAAATAA GGCCGCAT TAA ATGCGGCC TTATGCTTATTTACC TERM 2538 2036152 - 2036170 + r 100 -14.6 -3.65135 | opp_overlap 2036149 2036152, overlap 2036149 2036146 TTTACCAACAAATAA GGCCGCAT TAA ATGCGGCC TTATGCTTATTTACC metG 2038243 - 2036213 - | methionyl-tRNA synthetase TERM 2539 2038946 - 2038957 + G 70 -4.4 -4.68724 | CCATGGGATTGCCGC CCAA TCGA TTGG TTTTATGTTAAGTGG Shewmr7_1731 2038404 - 2039519 + | ATP-binding Mrp/Nbp35 family protein Shewmr7_1732 2039531 - 2040169 + | uridine kinase dcd 2040199 - 2040780 + | deoxycytidine triphosphate deaminase TERM 2540 2040863 - 2040891 + G 83 -3.1 -5.42198 | gap 1 TGGTGATGGCCTATT TGCCACGATGCG AACCGA CGCG-CATGGCA TTTTGTTTTTTGAGC Shewmr7_1734 2040786 - 2041595 + | aminodeoxychorismate lyase apoprotein Shewmr7_1735 2041592 - 2042602 + | aminodeoxychorismate lyase Shewmr7_1736 2042599 - 2043228 + | thymidylate kinase TERM 2541 2043282 - 2043254 - g 73 -11.7 -2.50935 | opp_overlap 2043253 2043254 2043271, overlap 2043253 ATTCGATGTATTAAC CCTGCCTTGGCTC GAT GCGCCAAAACAGG CGTTTTTAACCCAGT TERM 2542 2043271 - 2043284 + G 71 -5.2 -4.58283 | opp_overlap 2043254 2043253, overlap 2043254 2043253 TGCCTTGGCTCGATG CGCC AAAACA GGCG TTTTTAACCCAGTTA TERM 2543 2043338 - 2043312 - g 70 -4.2 -4.72846 | opp_overlap 2043314, overlap 2043314 TTACACACCCAAAAA GTCCCCCACGCG CAA CTCGTGGGTATC GATTCCGCCTATGGC Shewmr7_1737 2043222 - 2044178 + | DNA polymerase III, delta prime subunit TERM 2544 2044331 - 2044367 + G 70 -11 -2.57721 | gap 2, overlap 2044336 CTATCGTTTACCCGG CGCGACCACCTCCAACGA GTT TCGT-GG-GGTGGTTGTG TGGATTAATCCCTTA Shewmr7_1738 2044185 - 2044511 + | type IV pilus biogenesis protein pilZ Shewmr7_1739 2044603 - 2045427 + | TatD family hydrolase TERM 2545 2045585 - 2045557 - T 95 -5.9 -5.63504 | AAGCCCATAAAAAAA GGCCCAAAACGAT TCC AACTGTTTGGGCC TAGGGGAATGGCTCG yebU 2047276 - 2045744 - | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 2546 2047906 - 2047924 + G 73 -8.8 -3.77087 | GCGGGGCTTTTGATC GTCGCTGT TGT GCAGCGGC TTTCACTGTTCAATG TERM 2547 2048375 - 2048360 - g 70 -9 -3.56092 | opp_overlap 2048374 CTATGATGCTCGAAA CCATGG CGCA CCATGG GGTGGACTCCTTTGC Shewmr7_1741 2047339 - 2048565 + | nucleoside recognition domain-containing protein TERM 2548 2048624 - 2048662 + T 100 -17.7 -3.10715 | opp_overlap 2048624 2048627, overlap 2048627 CACTTTAGCGGATAA CAATCAGGCACATTAGA GTTTA TCTAATGCGCCTGATTG TTAAATGATACTAAG TERM 2549 2048662 - 2048624 - T 100 -19.9 -3.33162 | opp_overlap 2048624 2048627, overlap 2048627 CACTTTAGCGGATAA CAATCAGGCACATTAGA GTTTA TCTAATGCGCCTGATTG TTAAATGATACTAAG TERM 2550 2048627 - 2048659 + T 100 -13.6 -3.69663 | opp_overlap 2048624 2048627, overlap 2048624 TTTAGCGGATAACAA TCAGGCACATTAGA GTTTA TCTAATGCGCCTGA TTGTTAAATGATACT TERM 2551 2048659 - 2048627 - T 100 -15.8 -3.80733 | opp_overlap 2048627 2048624, overlap 2048624 TTTAGCGGATAACAA TCAGGCACATTAGA GTTTA TCTAATGCGCCTGA TTGTTAAATGATACT TERM 2552 2048847 - 2048865 + T 71 -6.8 -4.09864 | opp_overlap 2048845 2048842 2048847 2048848, overlap 2048848 ATATAATAATTAAGA TCTTCTTT CTT AAAGAAGG TTTTAGCGACTAACT TERM 2553 2049072 - 2049056 - T 72 -9.4 -3.07522 | ATATTCCGTAATACA GGCCCT GAATG AGGGCC TTAGCAAAATGGATT Shewmr7_1742 2051726 - 2049090 - | hypothetical protein Shewmr7_1743 2052330 - 2051713 - | paraquat-inducible protein A Shewmr7_1744 2052967 - 2052332 - | paraquat-inducible protein A TERM 2554 2053256 - 2053241 - g 70 -4.6 -4.71061 | ATTTACATCGAAAAA GGAGGC TGAC GCCTAC GATAAGATGCTCGAC TERM 2555 2053458 - 2053444 - g 80 -2.1 -5.47821 | gap 1, overlap 2053457 ATGCAGCGAAAAAAA CG-CCT AAGA AGGACG ACGCTGCCGAATAAT Shewmr7_1745 2053173 - 2053472 + | YebG family protein Shewmr7_1746 2053488 - 2053946 + | putative GAF sensor protein TERM 2556 2054049 - 2054020 - f 71 -8.7 -3.36878 | gap 1, opp_overlap 2053993 2054017, overlap 2054047 CGCATGCACTGATAA GGCTTATTTTGAGC ACA GC-CGAAATAAGCC TGATAGGTTCAGCCG Shewmr7_1747 2054221 - 2054865 + | putative solute/DNA competence effector Shewmr7_1748 2054894 - 2056945 + | carboxy-terminal protease TERM 2557 2056993 - 2056979 - f 79 -8.5 -4.14243 | opp_overlap 2056979 TACCGTATCTTAAAA CGCGC TTATG GCGCG TTTTTCTTATTTAGA TERM 2558 2056979 - 2056993 + F 100 -9.2 -5.38549 | opp_overlap 2056979 TACCGTATCTTAAAA CGCGCT TAT GGCGCG TTTTTCTTATTTAGA TERM 2559 2057628 - 2057661 + G 75 -8.9 -3.92075 | gap 1 ACAGGATGAGTTTAT CACCCGCAGTCATCGC AAA GTGGT-ACTGCAGGTG TTTGTCGATAAAGGT TERM 2560 2057779 - 2057790 + G 76 -5.8 -4.70659 | opp_overlap 2057779 GATATCTACATGATA GTCG CGGT CGAC TTTTTCAATATGGGG TERM 2561 2058086 - 2058072 - g 78 -6.4 -4.78764 | overlap 2058073 TAAAGTCATCAAAAA CCAGCA GTT TGCTGA AGACTCAGGCCCCAT TERM 2562 2059431 - 2059414 - g 71 -5.5 -4.44448 | overlap 2059416 ATCAGCTTAAATAAA CTCAACC CACA GGTTGCG GCGCGTATGGTGACG Shewmr7_1749 2057029 - 2059578 + | aminopeptidase N TERM 2563 2059583 - 2059612 + F 100 -15.9 -3.07113 | gap 1, opp_overlap 2059586, overlap 2059585 2059586 TAGCACAGTAGCTAT GAA-GAGGGCAGCA TTA TGCTGCCCTCATTC TTCCATGCAGTAATG TERM 2564 2059585 - 2059609 + F 100 -14.3 -3.68073 | opp_overlap 2059586, overlap 2059583 2059586 GCACAGTAGCTATGA AGAGGGCAGCA TTA TGCTGCCCTCA TTCTTCCATGCAGTA TERM 2565 2059608 - 2059586 - f 100 -17.8 -3.1994 | opp_overlap 2059585 2059583 2059586 CACAGTAGCTATGAA GAGGGCAGCA TTA TGCTGCCCTC ATTCTTCCATGCAGT TERM 2566 2059586 - 2059608 + F 100 -17.8 -2.80522 | opp_overlap 2059586, overlap 2059585 2059583 CACAGTAGCTATGAA GAGGGCAGCA TTA TGCTGCCCTC ATTCTTCCATGCAGT Shewmr7_1750 2059888 - 2060106 + | hypothetical protein TERM 2567 2060470 - 2060449 - g 82 -7.5 -4.68645 | opp_overlap 2060468 GAGCTAAAATGAAAA TTGTTAAAA AAAG TTTTAACAA GTCGGCGCTTGCTTT Shewmr7_1751 2060442 - 2062484 + | hypothetical protein TERM 2568 2062640 - 2062626 - g 70 -3.4 -4.84359 | overlap 2062627 2062628 TTAGGCGCAGAAAAA GCCGGC AAT GCCGAT GGCTCTATCCCCGCT TERM 2569 2062862 - 2062849 - g 71 -5.9 -4.4017 | overlap 2062850 TGAATGTGTACAAAA CGCGC CGCA GCGCA TCAGTGCCACAATTT Shewmr7_1752 2062497 - 2063861 + | hypothetical protein TERM 2570 2063875 - 2063897 + F 71 -9 -3.34192 | opp_overlap 2063878, overlap 2063878 AATCAGCCACGGTAT AAAGGGGCGC TAA GCGCCCCTCA TTAGTTAAGGAAGTT TERM 2571 2063878 - 2063894 + F 100 -15.1 -2.84098 | opp_overlap 2063878, overlap 2063875 CAGCCACGGTATAAA GGGGCGC TAA GCGCCCC TCATTAGTTAAGGAA TERM 2572 2063894 - 2063878 - f 100 -15.1 -3.89822 | opp_overlap 2063878 2063875 CAGCCACGGTATAAA GGGGCGC TAA GCGCCCC TCATTAGTTAAGGAA TERM 2573 2064451 - 2064436 - g 72 -3.9 -4.8622 | TGGCTGAATTAAAAA GCAGC GATCAA GCCGC TTATCTAACTGAGCG Shewmr7_1753 2063916 - 2064926 + | BNR repeat-containing protein TERM 2574 2065090 - 2065076 - g 70 -2.8 -4.88407 | CGAGCCAATTAAAAA TGGATG CGG CATTCA TTAAAAATATTCCGC TERM 2575 2065156 - 2065138 - g 77 -10.4 -3.62864 | CAAACCTACCTCAAA CACCAAAA AGA TTTTGGTG GCGCGAATAGCATTA TERM 2576 2065916 - 2065928 + G 79 -9.1 -4.24342 | AGGCGGCTTCGGCTT CTGCG TTT CGCAG TTTATTGGTGCCAGG TERM 2577 2066879 - 2066869 - g 74 -6.8 -4.30978 | opp_overlap 2066878 TTTAAGTCATTAAAA GCGA CAG TCGC GGTGATTATTCCGCT Shewmr7_1754 2064958 - 2067273 + | hypothetical protein TERM 2578 2067279 - 2067309 + F 75 -9 -3.70902 | opp_overlap 2067281 2067284, overlap 2067280 2067284 GGCTAAGTAGTTACA AACAATGGGGAGTT TTT GACTCCCCATTGCC TTTGAATATAAACGC TERM 2579 2067280 - 2067308 + F 89 -12.5 -2.82327 | opp_overlap 2067281 2067284, overlap 2067279 2067284 GCTAAGTAGTTACAA ACAATGGGGAGTT TTT GACTCCCCATTGC CTTTGAATATAAACG TERM 2580 2067307 - 2067281 - f 100 -15.3 -3.95153 | opp_overlap 2067280 2067279 2067284, overlap 2067284 CTAAGTAGTTACAAA CAATGGGGAGT TTTTG ACTCCCCATTG CCTTTGAATATAAAC TERM 2581 2067304 - 2067284 - f 93 -11.2 -4.09519 | opp_overlap 2067280 2067279 2067284, overlap 2067281 AGTAGTTACAAACAA TGGGGAGT TTTTG ACTCCCCA TTGCCTTTGAATATA TERM 2582 2067284 - 2067304 + F 89 -11.9 -3.30038 | opp_overlap 2067284 2067281, overlap 2067280 2067279 AGTAGTTACAAACAA TGGGGAGTT TTT GACTCCCCA TTGCCTTTGAATATA TERM 2583 2067755 - 2067744 - g 87 -7.2 -4.9448 | overlap 2067752 ATGCACTAAACAAAA CCCC GAAA GGGG AGACTCACCTCAGAG Shewmr7_1755 2067539 - 2072383 + | glutamate dehydrogenase (NAD) TERM 2584 2072422 - 2072403 - f 82 -10.6 -3.63276 | opp_overlap 2072403, overlap 2072397 TTATAACAATCAGAA GCCCTGGC GATC GCCGGGGC TTTTTTTAGGTCGAG TERM 2585 2072403 - 2072422 + F 100 -12.8 -5.47218 | opp_overlap 2072397 2072403 TTATAACAATCAGAA GCCCTGGC GATC GCCGGGGC TTTTTTTAGGTCGAG Shewmr7_1756 2072446 - 2073465 + | dihydroorotate dehydrogenase 2 TERM 2586 2073506 - 2073551 + F 93 -12.2 -3.6682 | opp_overlap 2073527 2073548, overlap 2073508 TAAATTACGATCATT TATCTTAACTGCGATCTA AAACGATCAA TAGATCGCAGTTAAGATC TTTAAATAGATCCAC TERM 2587 2073508 - 2073549 + F 100 -14.8 -3.41569 | opp_overlap 2073527 2073548, overlap 2073506 AATTACGATCATTTA TCTTAACTGCGATCTA AAACGATCAA TAGATCGCAGTTAAGA TCTTTAAATAGATCC TERM 2588 2073540 - 2073527 - f 71 -6.7 -4.18762 | opp_overlap 2073508 2073506 AACTGCGATCTAAAA CGATC AATA GATCG CAGTTAAGATCTTTA Shewmr7_1757 2073666 - 2074199 + | hypothetical protein TERM 2589 2074198 - 2074231 + T 73 -6 -4.43208 | opp_overlap 2074201, overlap 2074201 ATGTCGTCGCCGCCT AAATGACGGTCTAG CCAAGT CTTGGCCGTCATTA TTTATTTCGAGCTAT TERM 2590 2074201 - 2074228 + T 79 -7.7 -4.32678 | opp_overlap 2074201, overlap 2074198 TCGTCGCCGCCTAAA TGACGGTCTAG CCAAGT CTTGGCCGTCA TTATTTATTTCGAGC TERM 2591 2074670 - 2074631 - T 100 -13.1 -3.68073 | opp_overlap 2074630 2074628 TACTTTAGTGAATAA TGGGCTTTGTTTACCTA TATCGC TAAGGAAACAAAGCCCA GTCAATTTCAGCGAC Shewmr7_1758 2077310 - 2074710 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2592 2074906 - 2074918 + g 74 -4.1 -5.01732 | overlap 2074911 ATGCCCAGCGTCTTC TTGAG TTG CTCGA TTTTTTCCAGCAATT TERM 2593 2077095 - 2077121 + g 74 -11 -3.07935 | opp_overlap 2077086 2077101, overlap 2077097 2077101 GTAAATGTACTCGGA GGCAAAGTGGTT TTT AATCACTTTGTC TTCAATCACTCCCAT TERM 2594 2077357 - 2077329 - H 86 -7.6 -4.62302 | opp_overlap 2077329, overlap 2077319 TAAGACTCCTAAAAA GATTTAGGGAAT GCGCG ATTCGCTAAATC TTCTTTATGGTGAAA TERM 2595 2077329 - 2077357 + H 76 -7.6 -4.11183 | opp_overlap 2077329 2077319 TAAGACTCCTAAAAA GATTTAGGGAAT GCGCG ATTCGCTAAATC TTCTTTATGGTGAAA TERM 2596 2077641 - 2077651 + G 78 -2.6 -5.252 | ACTTGGAGTTAACAC TTTA CGT TAAA TTTTTTCTCGGCCTC Shewmr7_1759 2077628 - 2078260 + | hypothetical protein TERM 2597 2078274 - 2078293 + F 83 -9.3 -4.03811 | AATTGACCTTATCGG GGGAGGA CTATGT TCCTCCC TTGTTTGGTGGTGTA TERM 2598 2078306 - 2078322 + F 78 -5.9 -4.82154 | CCCTTGTTTGGTGGT GTATTTG TTG CAGATAC TTTTTCATCTCAATT Shewmr7_1760 2078514 - 2080508 + | methyl-accepting chemotaxis sensory transducer TERM 2599 2080827 - 2080812 - f 75 -9 -3.68265 | opp_overlap 2080812 AAATTCAAGTTTAAA GACGTC CTAG GACGTC TTTTTTCTTACCTGT TERM 2600 2080812 - 2080827 + F 100 -9 -5.49234 | opp_overlap 2080812 AAATTCAAGTTTAAA GACGTC CTAG GACGTC TTTTTTCTTACCTGT TERM 2601 2081075 - 2081122 + F 70 -8 -3.6288 | opp_overlap 2081075 2081079 TTTATTCAGTGATAA GTAATGCTTGATTTTAGAGT GCGAAATA ATGCCAAAATCAAGCATTAC TTTGGGGCTTAATTT TERM 2602 2081385 - 2081373 - g 77 -9.1 -4.0371 | GAGGCGCGAGATAAA GCGCT AGA AGCGC GAAAAAACTTGGCCG Shewmr7_1761 2081154 - 2082389 + | phage integrase family protein TERM 2603 2082459 - 2082430 - f 79 -8.5 -4.18018 | gap 1, opp_overlap 2082435, overlap 2082431 CTCCCTGAGTCAAAA GGTTAGGGGACGTG ACA CACGGCCCCTT-CC TGAAGTCCGACTAAG TERM 2604 2082435 - 2082455 + F 93 -12.5 -3.16564 | opp_overlap 2082430 2082431 TGAGTCAAAAGGTTA GGGGACGTG ACA CACGGCCCC TTCCTGAAGTCCGAC Shewmr7_1762 2082516 - 2083346 + | hypothetical protein Shewmr7_1763 2084645 - 2083605 - | integrase catalytic subunit Shewmr7_1764 2085371 - 2084730 - | hypothetical protein TERM 2605 2084989 - 2085002 + g 86 -5.2 -5.36441 | opp_overlap 2084989 GGGTGGATAAAAAAT GCCG CAGAGT CGGC TTTTTTATCTGGAAA TERM 2606 2085632 - 2085616 - H 95 -8.1 -5.00616 | opp_overlap 2085616 TCTTTCCTTAAAAAA GAACTTT TGC AAAGTTC TTTATTTTTAATCGG TERM 2607 2085616 - 2085632 + H 95 -8.1 -4.91852 | opp_overlap 2085616 TCTTTCCTTAAAAAA GAACTTT TGC AAAGTTC TTTATTTTTAATCGG TERM 2608 2085755 - 2085778 + H 71 -6.8 -4.15543 | AATTGACATTTAGGT TTGTAAGAGT GAAA ACTCTTTCAA TTTTAGGCATGTTTA TERM 2609 2085806 - 2085858 + H 100 -13.2 -3.76048 | gap 1, overlap 2085811 2085814 TTAAAGTCCATTTTT TTATGTTTTATCGCTATTCTTGCTA TAAA TAGCAAGAATAGCGATATAAT-TAG TTATGTTGATTGCGA TERM 2610 2085811 - 2085854 + H 100 -20 -3.56056 | overlap 2085806 2085814 GTCCATTTTTTTATG TTTTATCGCTATTCTTGCTA TAAA TAGCAAGAATAGCGATATAA TTAGTTATGTTGATT TERM 2611 2085814 - 2085851 + H 100 -21.7 -2.89803 | overlap 2085811 2085806 CATTTTTTTATGTTT TATCGCTATTCTTGCTA TAAA TAGCAAGAATAGCGATA TAATTAGTTATGTTG Shewmr7_1765 2086443 - 2086655 + | phage transcriptional regulator, AlpA Shewmr7_1766 2086695 - 2088161 + | hypothetical protein Shewmr7_1767 2088466 - 2089143 + | hypothetical protein TERM 2612 2089192 - 2089213 + F 91 -8 -4.84918 | opp_overlap 2089191 ATAGGGAAGTAAAGG GCAAGGGG CTCAAA TCCCTTGC TTTTGTGTTTATCGA Shewmr7_1768 2089914 - 2090627 + | hypothetical protein Shewmr7_1769 2091181 - 2090897 - | CopG family transcriptional regulator TERM 2613 2091412 - 2091387 - R 86 -6.9 -4.91459 | gap 1, opp_overlap 2091387 TAAGAGGGATAAAAA CGATAGCGGC GAGTGAT GCCGCT-TCG TTTATAGGGGTTGGC TERM 2614 2091387 - 2091412 + r 72 -7.6 -3.89614 | gap 1, opp_overlap 2091387 TAAGAGGGATAAAAA CGATAGCGGCG AGTGA TGCCGCT-TCG TTTATAGGGGTTGGC Shewmr7_1770 2092188 - 2091466 - | retinol acyltransferase domain-containing protein Shewmr7_1771 2092891 - 2092277 - | phage integrase family protein TERM 2615 2092918 - 2092950 + r 71 -9.2 -3.05816 | opp_overlap 2092875 ATCGGGCCTGCATTG CTTGGTTCCCAAAA TACCT TTGTGGGCACCAAG TTCAGTCGGCACTAA Shewmr7_1772 2093359 - 2092952 - | hypothetical protein TERM 2616 2093405 - 2093380 - R 100 -11.2 -5.46706 | gap 1 ACTCCAAAACAAAAA GCCCGCGAACG ACAGG CGTT-GCGGGC AGGGTAGGTTGTTAA Shewmr7_1773 2093962 - 2093549 - | hypothetical protein TERM 2617 2093994 - 2094027 + r 100 -18.3 -3.60814 | opp_overlap 2093984 2093997 2094004, overlap 2093997 AAAAACGGGCATACG CAAGAGCTAAGGCGT AACT GCGCCTTGGCTCTTG TTGTCTATGCGGTTT TERM 2618 2093997 - 2094024 + r 100 -14.2 -3.92996 | opp_overlap 2093984 2093997 2094004, overlap 2093994 AACGGGCATACGCAA GAGCTAAGGCGT AACT GCGCCTTGGCTC TTGTTGTCTATGCGG TERM 2619 2094024 - 2093997 - R 84 -11.3 -3.12847 | opp_overlap 2093997 2093994, overlap 2093984 2094004 AACGGGCATACGCAA GAGCTAAGGCG TAACTG CGCCTTGGCTC TTGTTGTCTATGCGG Shewmr7_1774 2094557 - 2094201 - | hypothetical protein Shewmr7_1775 2095058 - 2094696 - | hypothetical protein Shewmr7_1776 2095605 - 2095099 - | DNA repair protein RadC Shewmr7_1777 2095728 - 2095949 + | phage transcriptional regulator, AlpA Shewmr7_1778 2096097 - 2097053 + | hypothetical protein Shewmr7_1779 2097080 - 2098123 + | transcriptional regulator-like protein TERM 2620 2098174 - 2098185 + G 73 -5.8 -4.45068 | opp_overlap 2098173, overlap 2098170 CAAATGTTACTCAAT GGCT TCGA AGCC TTTGTTATTAAGCAT Shewmr7_1780 2098120 - 2098821 + | hypothetical protein Shewmr7_1781 2099128 - 2100009 + | hypothetical protein TERM 2621 2100200 - 2100217 + G 74 -11.3 -3.11683 | overlap 2100197 2100195 2100194 ACGTGATGTGTACGT TCGCGGT AAGT ACCGCGA TGTGATTTTACCTAT Shewmr7_1782 2100123 - 2102612 + | N-6 DNA methylase Shewmr7_1783 2102612 - 2103958 + | restriction modification system DNA specificity subunit TERM 2622 2104658 - 2104647 - g 95 -5.8 -5.4756 | opp_overlap 2104647 AAGCGGAAGAAAAAA CCAC CGAA GTGG TCCTTAAAAACCGCC Shewmr7_1784 2103968 - 2104846 + | hypothetical protein Shewmr7_1785 2105012 - 2106388 + | hypothetical protein TERM 2623 2107160 - 2107149 - g 76 -5.8 -4.73448 | ACAGATATTCAAAAA TGCC GACT GGCA AACTCTGGAGTATAC Shewmr7_1786 2106385 - 2108334 + | hypothetical protein TERM 2624 2109764 - 2109750 - g 71 -11.4 -2.84602 | opp_overlap 2109759, overlap 2109749 TTCAGGCGATGAAAT CGCGCA AGA TGCGCG GGAATGCGTCGTACC TERM 2625 2110480 - 2110470 - g 83 -3.2 -5.41746 | AATGGGGTAAAAAAA CAGA AGA CCTG TTTGTTTTAGACTTT TERM 2626 2110586 - 2110576 - g 71 -6.8 -4.17296 | GGCTACAGATATAAA CGTG CTG CACG AGTTGAAGGATGAAA Shewmr7_1787 2108324 - 2111359 + | type III restriction enzyme, res subunit Shewmr7_1788 2111378 - 2112463 + | ATP-binding region, ATPase-like protein TERM 2627 2112587 - 2112615 + G 70 -3.2 -4.80882 | gap 1, opp_overlap 2112587 2112589, overlap 2112589 TGTGAAGATTAAAAA GATCGT-TGATGG TCAC CCATCATGCGATA TTTTTGCTATCAGCT Shewmr7_1789 2112486 - 2113037 + | hypothetical protein TERM 2628 2113019 - 2113037 + F 100 -7.5 -5.77853 | TGGGTTAGAGTTCGT CTACAGA TCAAT TCTGTAG TTTTTTTTGAAACTT TERM 2629 2113102 - 2113114 + F 100 -7.7 -5.46657 | GTTATTATTTGATCA GATCC TTT GGATC TTTTTTATTAACATC TERM 2630 2113326 - 2113308 - g 84 -13.2 -3.3705 | overlap 2113298 AAAGACATCCGACAA GACGCCTT TTA AAGGCGTC AGGAAGGAGAAATAG Shewmr7_1790 2113168 - 2113341 + | hypothetical protein Shewmr7_1791 2113343 - 2113711 + | membrane-bound metal-dependent hydrolase Shewmr7_1792 2113721 - 2114875 + | hypothetical protein Shewmr7_1793 2114868 - 2116058 + | hypothetical protein TERM 2631 2116744 - 2116727 - g 88 -4.1 -5.54079 | overlap 2116731 2116732 TGAAAAACCAAAAAA GAGAGTT GGGA AACCCCC AAAAAAGCCTGGTAG Shewmr7_1794 2116059 - 2116772 + | hypothetical protein Shewmr7_1795 2116856 - 2117014 + | hypothetical protein TERM 2632 2117227 - 2117197 - f 89 -11.5 -3.53811 | opp_overlap 2117195 GTTATTTGTGGTAAA TTTTTATTGACTT TTTAT AAGTCAATAAAAA CCATTTAAATACAAA TERM 2633 2117433 - 2117477 + F 100 -16.1 -3.16647 | opp_overlap 2117439, overlap 2117439 CTCACCGCCACATTC TAAGAAGCCGCAATTACTT ATATATC AAGTAATTGCGGCTTTTTG CTTTTGCTGAATAAC TERM 2634 2117471 - 2117439 - f 100 -15.8 -3.66844 | opp_overlap 2117439 2117433 GCCACATTCTAAGAA GCCGCAATTACTTA TATAT CAAGTAATTGCGGC TTTTTGCTTTTGCTG TERM 2635 2117439 - 2117471 + F 100 -15.1 -5.1166 | opp_overlap 2117439, overlap 2117433 GCCACATTCTAAGAA GCCGCAATTACTT ATATATC AAGTAATTGCGGC TTTTTGCTTTTGCTG TERM 2636 2117948 - 2117929 - g 74 -2.2 -5.08601 | gap 1, overlap 2117933 TCATTGCAAGAAAAA TACACTCTG CCG CAAAG-GTA AAAGTAGAGAGTAAC TERM 2637 2118001 - 2117983 - g 78 -2.4 -5.23316 | opp_overlap 2117978 TAGCACATCAAAAAA TCACCGAT TTT ATTAGTGA AAACATCGGTATAAA TERM 2638 2118371 - 2118357 - g 78 -10 -3.85698 | TCTGCGTCGGATAAA CGTCCA CGA TGGACG AGTGAACAATTACTG Shewmr7_1796 2117520 - 2119019 + | phage integrase family protein TERM 2639 2119007 - 2119020 + T 73 -3.9 -4.91873 | GGTCGCCTCAGACCC GTTAT TTCG ATAAC TTTTTACTTGGTGTG Shewmr7_1797 2120489 - 2119611 - | hypothetical protein TERM 2640 2120533 - 2120546 + r 100 -4.5 -6.02919 | opp_overlap 2120533 2120530, overlap 2120525 GTTATTGAAAAAGAA CCTCT TGCC GGAGG TTTTTTTGTTTATGC Shewmr7_1798 2121077 - 2120556 - | hypothetical protein TERM 2641 2121029 - 2121007 - G 73 -11.3 -2.87463 | AACTGGCTTGATACA GCGGCAAGT GAATA ACCTGCCGC AATCATCGCTAAAAC Shewmr7_1799 2121586 - 2121251 - | hypothetical protein Shewmr7_1800 2121894 - 2121586 - | hypothetical protein Shewmr7_1801 2122753 - 2122067 - | resolvase domain-containing protein Shewmr7_1802 2123874 - 2123503 - | hypothetical protein TERM 2642 2124374 - 2124340 - R 95 -13 -3.12668 | opp_overlap 2124341 2124345, overlap 2124345 CACCGCCATATTTAA GCAAAGGGAATCAGTA TTT TACTGGTTCCCTTTGT TGTTTCTGGGCAAAA TERM 2643 2124341 - 2124373 + r 100 -18.7 -4.06419 | opp_overlap 2124340 2124345, overlap 2124345 ACCGCCATATTTAAG CAAAGGGAATCAGTA TTT TACTGGTTCCCTTTG TTGTTTCTGGGCAAA TERM 2644 2124345 - 2124369 + r 100 -13.7 -4.63048 | opp_overlap 2124340 2124345, overlap 2124341 CCATATTTAAGCAAA GGGAATCAGTA TTT TACTGGTTCCC TTTGTTGTTTCTGGG TERM 2645 2124369 - 2124345 - R 100 -11.5 -3.94746 | opp_overlap 2124345 2124341, overlap 2124340 CCATATTTAAGCAAA GGGAATCAGTA TTT TACTGGTTCCC TTTGTTGTTTCTGGG TERM 2646 2125567 - 2125607 + r 100 -18.6 -4.4078 | gap 1, opp_overlap 2125567 TTTAAGATAAACAAA TGCCGCGCTTAATCGTTTA GGTT TGAACG-TTAAGCGCGGCA TTTTACTTAGGACAA TERM 2647 2125607 - 2125567 - R 100 -16.4 -4.68511 | gap 1, opp_overlap 2125567 TTTAAGATAAACAAA TGCCGCGCTTAATCGTTTA GGTT TGAACG-TTAAGCGCGGCA TTTTACTTAGGACAA TERM 2648 2125676 - 2125696 + r 100 -11.1 -4.36903 | overlap 2125680 TACAATGTTCACAGC GAGGCCGCC TTT GGCGGTTTC TTTGTATTTACTGCG Shewmr7_1804 2127028 - 2125652 - | L-serine ammonia-lyase TERM 2649 2125680 - 2125692 + g 100 -10.5 -4.73432 | overlap 2125676 ATGTTCACAGCGAGG CCGCC TTT GGCGG TTTCTTTGTATTTAC Shewmr7_1805 2127413 - 2128441 + | beta-hexosaminidase Shewmr7_1806 2128523 - 2129062 + | hypothetical protein TERM 2650 2129093 - 2129124 + F 73 -5.2 -4.68724 | gap 1, overlap 2129093 2129094 TTTTGTGATTAAAGA G-GCTTATCGCTGAG TAT TTTGGCGATGAGCAC TTTTATATTAGCTCG Shewmr7_1807 2129161 - 2129421 + | hypothetical protein TERM 2651 2129460 - 2129484 + F 100 -9.4 -5.64274 | opp_overlap 2129462 GTATGTCGCCCGACA CAGCTAACAG CAGTC TTGTTAGCTG TTTTTTTATACCTGC Shewmr7_1808 2129622 - 2129894 + | acylphosphatase TERM 2652 2129955 - 2129976 + T 100 -9.5 -5.4505 | gap 1, opp_overlap 2129955 GAAGGCAATAAAAAA GCGGT-ATGC ATT GCATGACCGC TTTTTTATTCGAGCA TERM 2653 2129976 - 2129955 - T 100 -9.5 -5.5074 | gap 1, opp_overlap 2129955 GAAGGCAATAAAAAA GCGGT-ATGC ATT GCATGACCGC TTTTTTATTCGAGCA Shewmr7_1809 2131033 - 2130005 - | hypothetical protein Shewmr7_1810 2134515 - 2131033 - | transcription-repair coupling factor TERM 2654 2132245 - 2132257 + g 82 -10.5 -3.86208 | opp_overlap 2132238 TAAAATATCCACGTT GGCGC GTA GCGCC TTGATTTTCTCTTTT Shewmr7_1811 2135222 - 2134602 - | hypothetical protein TERM 2655 2135371 - 2135384 + G 71 -5.3 -4.45817 | opp_overlap 2135371, overlap 2135368 TGGCGGGCCAGAAAA GCAAA CGCC TTTGC TTCTTTTATTACCTT TERM 2656 2135403 - 2135416 + G 85 -3.8 -5.42259 | TTTTATTACCTTATT TGCC GTTTCA GGCA TTTTTTTAGGGGTGG TERM 2657 2135503 - 2135485 - g 76 -6.6 -4.52781 | GAAGGACAATTAAAA CAGCGCAT TTT AGGCGCCG TACCGCAATTGACCG TERM 2658 2136235 - 2136224 - g 71 -5.8 -4.36914 | overlap 2136225 TGGTGGTGGATAAAA CCAC CGAC GTGG CGGTACTCAAAACCC Shewmr7_1812 2135317 - 2136549 + | LolC/E family lipoprotein releasing system, transmembrane protein TERM 2659 2136600 - 2136620 + G 83 -9.8 -4.14739 | TGAGAGACGTGTTTG GACATGGA GTTTA TCCATGTC TTTTAGAATCAATAG Shewmr7_1813 2136581 - 2137342 + | lipoprotein releasing system, ATP-binding protein Shewmr7_1814 2137339 - 2138589 + | LolC/E family lipoprotein releasing system, transmembrane protein TERM 2660 2138695 - 2138653 - T 100 -13.7 -3.07654 | gap 1, opp_overlap 2138664, overlap 2138664 2138693 AGAATAACGAAAGCA GCA-AACAAAAAGGCCAGTG AATT CACTGGCCTTTTTAATATGC GTTACGCTTGGAAGG TERM 2661 2138683 - 2138664 - T 100 -13.6 -5.34309 | opp_overlap 2138664, overlap 2138653 AGCAGCAAACAAAAA GGCCAGTG AATT CACTGGCC TTTTTAATATGCGTT TERM 2662 2138664 - 2138683 + T 100 -13.6 -4.82154 | opp_overlap 2138653 2138664 AGCAGCAAACAAAAA GGCCAGTG AATT CACTGGCC TTTTTAATATGCGTT Shewmr7_1815 2139520 - 2138717 - | inositol-phosphate phosphatase TERM 2663 2139272 - 2139289 + g 70 -4.2 -4.64861 | GCCATCCAGAGGATC GACTAT CCATAC ATAGTC TTTATTTTCGCCACG Shewmr7_1816 2139675 - 2140400 + | RNA methyltransferase TERM 2664 2140419 - 2140398 - f 78 -2.4 -5.47159 | gap 1, overlap 2140400 GGTAATAAACAAAAA TA-GCCAAA GCACA TTTGGCATA TAACGCTAATCGCGA TERM 2665 2140416 - 2140400 - f 74 -6.6 -4.35561 | overlap 2140398 TAATAAACAAAAATA GCCAAA GCACA TTTGGC ATATAACGCTAATCG TERM 2666 2140505 - 2140517 + G 80 -10.5 -3.67517 | opp_overlap 2140493 TCACCGTGATCCCGC GGCGC GCA GCGCC TTTGAGATCTTGGTC Shewmr7_1817 2140446 - 2141267 + | serine O-acetyltransferase TERM 2667 2141288 - 2141311 + F 78 -9.6 -3.58522 | GCGTGTGGCGCAGTG GCGTGTAGAT ATTA ATCCACACGC TTTGCCACTGATGAT TERM 2668 2141423 - 2141449 + F 78 -9.5 -3.67417 | TTAGATCCCGATATG GGGGCGATTAG GACGA TTAATTGCCCC TTTAGCATTGAATCT Shewmr7_1818 2141618 - 2142079 + | BadM/Rrf2 family transcriptional regulator Shewmr7_1819 2142158 - 2143372 + | cysteine desulfurase IscS TERM 2669 2143445 - 2143465 + G 74 -9.7 -3.53012 | opp_overlap 2143448, overlap 2143448 2143460 GATAGATCATTATGA GAACCCACG TAA CGTTGGTTC TTTCGACAAGAACGA Shewmr7_1820 2143410 - 2143793 + | scaffold protein Shewmr7_1821 2143808 - 2144131 + | iron-sulfur cluster assembly protein IscA TERM 2670 2144428 - 2144412 - g 70 -9.5 -3.28866 | opp_overlap 2144400, overlap 2144410 2144408 CCACAGTGAAAGATA CTGCATT TTT AATGCAG CAGATGGAATGGCGT hscB 2144147 - 2144671 + | co-chaperone HscB hscA 2144739 - 2146601 + | chaperone protein HscA Shewmr7_1824 2146610 - 2146945 + | ferredoxin, 2Fe-2S type, ISC system TERM 2671 2146967 - 2146999 + F 100 -15.8 -3.28712 | opp_overlap 2146975, overlap 2146975 CGATGCGATGATATC GTCAAAAACCAGTC CATGT GACTGGTTTTTGGC TTCTGGCGCCCAGCA TERM 2672 2146991 - 2146975 - f 86 -8 -4.61231 | opp_overlap 2146975 2146967 TGATATCGTCAAAAA CCAGTC CATGT GACTGG TTTTTGGCTTCTGGC TERM 2673 2146975 - 2146991 + F 91 -8 -4.78149 | opp_overlap 2146975, overlap 2146967 TGATATCGTCAAAAA CCAGTC CATGT GACTGG TTTTTGGCTTCTGGC TERM 2674 2147316 - 2147336 + G 71 -11.1 -2.77043 | overlap 2147315 ATCTATTACTTTTTA TGGCTCAGC TGT GCTGCGCCA GTTTGAGATGATGGG Shewmr7_1825 2147101 - 2148000 + | SSU ribosomal protein S6P modification protein Shewmr7_1826 2148069 - 2148266 + | hypothetical protein TERM 2675 2148311 - 2148326 + F 75 -9 -3.73224 | CAAAAACCGTACTTA CGTGAC AATT GTCACG TTTAGTGAACCCTAA TERM 2676 2148681 - 2148710 + F 100 -13.5 -5.00895 | CTGTTGTTATCCTTT CGCCAGTCCAGTC GAAT GACAGGTCTGGCG TTTTTGTGTGATCAA Shewmr7_1827 2148852 - 2149283 + | nucleoside diphosphate kinase TERM 2677 2149306 - 2149321 + F 100 -10.4 -5.4505 | opp_overlap 2149305 2149306 GCGAGACCGAAGAAG GGAGCC TAAG GGCTCC TTTTTTATTGGCGGC TERM 2678 2149321 - 2149306 - f 75 -10.4 -2.82142 | opp_overlap 2149306, overlap 2149305 GCGAGACCGAAGAAG GGAGCC TAAG GGCTCC TTTTTTATTGGCGGC Shewmr7_1828 2149587 - 2150030 + | heat shock protein Hsp20 TERM 2679 2150075 - 2150051 - T 100 -15.8 -3.92641 | opp_overlap 2150051 2150054, overlap 2150054 AATCGCACGGATAAA GAAGGGGAGC TTAAT GCTCCCCTTC TTGTTATCCCACTAA TERM 2680 2150051 - 2150075 + T 100 -15.8 -3.79906 | opp_overlap 2150051 2150054, overlap 2150054 AATCGCACGGATAAA GAAGGGGAGC TTAAT GCTCCCCTTC TTGTTATCCCACTAA TERM 2681 2150054 - 2150072 + T 100 -11.7 -4.02817 | opp_overlap 2150051 2150054, overlap 2150051 CGCACGGATAAAGAA GGGGAGC TTAAT GCTCCCC TTCTTGTTATCCCAC TERM 2682 2150072 - 2150054 - T 100 -11.7 -4.09117 | opp_overlap 2150054 2150051, overlap 2150051 CGCACGGATAAAGAA GGGGAGC TTAAT GCTCCCC TTCTTGTTATCCCAC Shewmr7_1829 2150648 - 2150154 - | acetolactate synthase 3 regulatory subunit Shewmr7_1830 2152366 - 2150648 - | acetolactate synthase 3 catalytic subunit TERM 2683 2151593 - 2151608 + g 70 -3.2 -4.87665 | GCGACCGTGCATCCC CAGCAT TCCT AAGCTG TTTTTATGGGTGCCA TERM 2684 2151918 - 2151895 - G 77 -11 -3.36492 | gap 1 TTGGCAAGTCGACAA CCACGGGGCCG GGG CGACC-CGTGG AGGCAATATAAAAGG TERM 2685 2152628 - 2152642 + r 74 -4.2 -4.9792 | TAGGCGCGATAAACG CTCATG AAA CAGGAG TTTTTGTGTGGGGTC TERM 2686 2152743 - 2152710 - R 71 -3.2 -4.93968 | gap 1 ATTTACAATGAAAAA CGGCAC-CAAGCTAC TATAT ATAACCTAAGTGCCG TTTATTTAGAGAACG Shewmr7_1831 2154056 - 2152833 - | Bcr/CflA subfamily drug resistance transporter TERM 2687 2153785 - 2153775 - G 71 -6.8 -4.23674 | GCTGACTAACATAAA GCCT GAG AGGC CCATTATTACCAAAG TERM 2688 2155459 - 2155446 - g 70 -8.1 -3.73858 | overlap 2155431 GGACATTAAAATTAA TGGCC CTAT GGCCA CTGTCGCGCAGGACT Shewmr7_1832 2154550 - 2156424 + | alkaline phosphatase TERM 2689 2156499 - 2156519 + T 100 -12.6 -4.85782 | opp_overlap 2156499 TAAGCAAGCTTAAAA CGCCAGAG CATCC CTCTGGCG TTTCTTTTTAACACG TERM 2690 2156519 - 2156499 - T 100 -12.6 -4.21768 | opp_overlap 2156499 TAAGCAAGCTTAAAA CGCCAGAG CATCC CTCTGGCG TTTCTTTTTAACACG Shewmr7_1833 2157904 - 2156546 - | GntR family transcriptional regulator Shewmr7_1834 2157997 - 2158623 + | lysine exporter protein LysE/YggA Shewmr7_1835 2158818 - 2160575 + | sulphate transporter TERM 2691 2160608 - 2160625 + T 100 -9.8 -5.38951 | opp_overlap 2160608 GAGAGTAACGACAAA GCGCGG CATGGC CCGCGC TTTTTTATCTCAGTT TERM 2692 2160625 - 2160608 - T 88 -9.8 -4.09215 | opp_overlap 2160608 GAGAGTAACGACAAA GCGCGG CATGGC CCGCGC TTTTTTATCTCAGTT Shewmr7_1836 2160915 - 2160691 - | hypothetical protein Shewmr7_1837 2161708 - 2161037 - | glutathione S-transferase domain-containing protein TERM 2693 2162280 - 2162262 - g 86 -6.6 -5.05153 | AGCTGAAAAAAGAAA TCGTCACC ATG GGCGTCGA GGGTATCGATCCGCT Shewmr7_1838 2161979 - 2162980 + | hypothetical protein TERM 2694 2163023 - 2163043 + F 100 -12.6 -5.626 | GTATGATTAGCACTA TGGCCCGA CACGT TCGGGCCA TTTTTTTATCAAATA TERM 2695 2163128 - 2163099 - f 74 -8.1 -3.97834 | TAACCCTATGATAAA TTTGCCTAAAT AGAATCGA ATTTAGGCAAA GACTGGCTGAGCCAG TERM 2696 2163143 - 2163131 - f 73 -9.1 -3.42283 | opp_overlap 2163130, overlap 2163129 GAATTTAGGCAAAGA CTGGC TGA GCCAG ATCTTGCAGCAGGGA Shewmr7_1839 2163165 - 2163629 + | hypothetical protein Shewmr7_1840 2163717 - 2164079 + | hypothetical protein Shewmr7_1841 2164731 - 2164222 - | glucose-specific PTS system component TERM 2697 2164566 - 2164595 + g 76 -7.2 -4.36914 | gap 1 CAATCGTGTCTCCTT TTG-GGGCTATGG CGATA CCATCGCCCACAA TTTTCTCGGCAAACA Shewmr7_1842 2166506 - 2164803 - | phosphoenolpyruvate--protein phosphotransferase TERM 2698 2165007 - 2164986 - G 81 -13.1 -3.27774 | GAGGGGAACCATCAA TGGCGAACT GGCT AGTTCGCCA CACAGTGACACTTTC TERM 2699 2165922 - 2165907 - G 73 -11.8 -2.60763 | overlap 2165906 CTGACAGTTGAGAAT GGCGGG GATC CCCGCC GCACGGGCTAAAATT Shewmr7_1843 2166796 - 2166539 - | HPr family phosphocarrier protein Shewmr7_1844 2167215 - 2166820 - | hypothetical protein TERM 2700 2167358 - 2167327 - R 91 -13.2 -2.7752 | opp_overlap 2167332, overlap 2167319 2167332 GACAGTATTTTAAAC TAAAAGAGGACGTA CTAA TACGTCCTCTTTAA ATGTGAGCGTGGCTT TERM 2701 2167332 - 2167353 + r 100 -13.1 -3.7108 | opp_overlap 2167327 2167332 TATTTTAAACTAAAA GAGGACGTA CTAA TACGTCCTC TTTAAATGTGAGCGT TERM 2702 2167353 - 2167332 - R 100 -13.1 -4.55798 | opp_overlap 2167332, overlap 2167327 TATTTTAAACTAAAA GAGGACGTA CTAA TACGTCCTC TTTAAATGTGAGCGT Shewmr7_1845 2169023 - 2167386 - | methyl-accepting chemotaxis sensory transducer TERM 2703 2168101 - 2168119 + g 70 -8.8 -3.57971 | overlap 2168102 AGCATCTGATTTACT GCGGTAGC CAC GCTACCGG TTTCACGGTGGATAT TERM 2704 2168102 - 2168118 + g 74 -12.3 -2.74461 | overlap 2168101 GCATCTGATTTACTG CGGTAGC CAC GCTACCG GTTTCACGGTGGATA TERM 2705 2168457 - 2168430 - G 74 -4.2 -4.81551 | CACGGATATCAAAAA CATGATAATCAA ATAA TCGATAATCACG CTATCTAGGCTCTCT TERM 2706 2169509 - 2169525 + G 73 -2.9 -4.92239 | opp_overlap 2169511, overlap 2169511 GCCCGTACCCGCTTA AAGCCTG ATT TAGGCTG TTTTTCGATTTTTGA Shewmr7_1846 2169371 - 2170099 + | hypothetical protein TERM 2707 2170493 - 2170479 - g 70 -3.4 -4.89393 | overlap 2170480 CAAAGTCGATAAAAA CGCCAG TAA CCTGCG CACTCAAAACAGCCA Shewmr7_1847 2170321 - 2171361 + | LacI family transcription regulator TERM 2708 2171390 - 2171413 + T 100 -15.4 -5.06816 | opp_overlap 2171390, overlap 2171384 TGATTTAATCACTAA GCCGAGTGTT ATCA AACACTCGGC TTTTTATTGGACACT TERM 2709 2171413 - 2171390 - T 100 -15.4 -3.2827 | opp_overlap 2171384 2171390 TGATTTAATCACTAA GCCGAGTGTT ATCA AACACTCGGC TTTTTATTGGACACT Shewmr7_1848 2172194 - 2171475 - | DNA polymerase III, epsilon subunit TERM 2710 2172361 - 2172385 + r 89 -11.5 -3.55563 | opp_overlap 2172366, overlap 2172366 GGCCGGCTGCAACTT CAAAATGGCCC GAG GGGACATTTTG TTTCGCGAGTGCAAT TERM 2711 2172366 - 2172380 + r 78 -5.6 -4.87133 | opp_overlap 2172366, overlap 2172361 GCTGCAACTTCAAAA TGGCCC GAG GGGACA TTTTGTTTCGCGAGT Shewmr7_1850 2173108 - 2172728 - | hypothetical protein Shewmr7_1851 2175308 - 2173176 - | exodeoxyribonuclease V, alpha subunit Shewmr7_1852 2179114 - 2175305 - | exodeoxyribonuclease V, beta subunit TERM 2712 2177090 - 2177107 + g 79 -7.7 -4.59109 | gap 1, overlap 2177093 GGCTAGGCTGAGCAG CGCCGGCA TAA TGCCG-CG TTTTTGCCAGATCTG TERM 2713 2177149 - 2177138 - G 81 -5.8 -5.0538 | opp_overlap 2177125 2177123 GTGCAGCTCAAAAAA CTGC TCTA GCAG CCTTTGGCGCTGCTC TERM 2714 2178639 - 2178618 - G 73 -5.1 -4.62069 | overlap 2178620 GCCTCACGCCAAAAA TCCCGCACC GCAT GGTGCAAAA ACTCACTGTCGTCCA TERM 2715 2178753 - 2178739 - G 73 -5.6 -4.66833 | CGTGAATGGTAAAAA TCGCCG CTT CGTCGA GGGATTTGAGCGCCA TERM 2716 2178973 - 2178957 - G 70 -9.5 -3.30338 | AGAATTTGTTCACAA TTAAGCG GTT CGCTTAA GCCATCCCCAAGCAG Shewmr7_1853 2182818 - 2179114 - | exodeoxyribonuclease V, gamma subunit TERM 2717 2182549 - 2182564 + g 83 -9 -4.4078 | CTTCCAGGTCATTGC CGCCTT AGTG AAGGCG TTTTCCTTGGGGACA Shewmr7_1854 2185075 - 2182928 - | transglutaminase domain-containing protein TERM 2718 2184838 - 2184850 + g 73 -9.1 -3.66999 | opp_overlap 2184833 TGACCAAGTAGCGCG GTGGC TTT GCCAC TTTGCCTACATAGAT Shewmr7_1855 2186157 - 2185072 - | hypothetical protein TERM 2719 2185495 - 2185506 + g 74 -7.2 -4.24075 | overlap 2185489 TTCACCGAGTACATG GGGC TTAA GCCC TTTGTATTCATCGAT TERM 2720 2185900 - 2185875 - G 76 -11.9 -2.87132 | gap 1, opp_overlap 2185862 TTTCGCCCGCATACA CCTCCG-GCGCT GTG AGCGCGCGAAGG CGCAAACCCGCGAGA Shewmr7_1856 2187119 - 2186208 - | ATPase TERM 2721 2186647 - 2186669 + g 73 -9.1 -3.68341 | CGGTCGAGTTGGGAT TCGGGCAGC GGAAA GGTGCCCGA TTGTTCCGTGGGGTT TERM 2722 2187419 - 2187463 + r 91 -12.8 -2.73681 | gap 1, overlap 2187427 GCAGCAAGTCCATCC GTG-GATGCTCGACCGCCCCA TCCT TGGGGCGGACGGTCGTCTCGC TAATTGCCATGGCTC TERM 2723 2187427 - 2187454 + r 100 -14.8 -2.6574 | overlap 2187419 TCCATCCGTGGATGC TCGACCGCCCCA TCCT TGGGGCGGACGG TCGTCTCGCTAATTG Shewmr7_1857 2189135 - 2187687 - | SEFIR domain-containing protein TERM 2724 2188344 - 2188372 + g 70 -2.5 -5.06016 | TTTAATCAAAGATTC GAAAAATTTATGT ATT ACAGGAATTGTTC TTTTATTTGTATCAT Shewmr7_1860 2191929 - 2191006 - | IS4 family transposase Shewmr7_1861 2192616 - 2193269 + | hypothetical protein Shewmr7_1862 2194284 - 2193583 - | diguanylate phosphodiesterase TERM 2725 2194464 - 2194435 - R 100 -18.7 -4.58395 | opp_overlap 2194438 TTGATGCTGTAAAAA CAATCGAGGCGGC TTAA GCCACCTCGATTG TGATCCCAGTTACTC TERM 2726 2194438 - 2194461 + r 100 -12.4 -3.41527 | opp_overlap 2194435 ATGCTGTAAAAACAA TCGAGGCGGC TTAA GCCACCTCGA TTGTGATCCCAGTTA Shewmr7_1863 2196426 - 2194501 - | lytic transglycosylase, catalytic TERM 2727 2194812 - 2194830 + g 86 -6.6 -5.03314 | ACAGATCCTTAGGAT CGCGGTAC TTG GCACCGTG TTTTTTGGCCGTAGC TERM 2728 2194926 - 2194915 - G 72 -3.6 -4.84527 | opp_overlap 2194921 CGCATAGAGGAAAAA CGCA CTTT CGCG GCGGCTAATGGCGCG TERM 2729 2195979 - 2195993 + g 72 -8.5 -3.84719 | CCCATAGTGACTGCG CCGCC GTGTA GGCGG TTTGGGTTTCGCCCT TERM 2730 2196381 - 2196353 - G 85 -11.7 -3.67864 | opp_overlap 2196351, overlap 2196346 2196354 GAAGTTAACGCGAAA GCCGCAGAGGCAT TAA ATGCCCCTGCGAT GATAATTGCGCTGGA TERM 2731 2196380 - 2196354 - G 84 -15.2 -2.80236 | opp_overlap 2196351, overlap 2196346 2196353 AAGTTAACGCGAAAG CCGCAGAGGCAT TAA ATGCCCCTGCGA TGATAATTGCGCTGG Shewmr7_1864 2198085 - 2196520 - | hypothetical protein TERM 2732 2197634 - 2197655 + g 80 -4.5 -5.1675 | gap 1, overlap 2197637 GTTTGCAGGCGCACT TCGGCCATTT CTA AAGTGGC-GA TTTTTTCCTGCATCG TERM 2733 2199205 - 2199216 + G 74 -4.4 -4.84761 | GAATCAACTCGCGCC CCAT GAGT ATGG TTTTTATGCCAATGT Shewmr7_1865 2198360 - 2199394 + | putative sulfite oxidase subunit YedY Shewmr7_1866 2199510 - 2200157 + | putative sulfite oxidase subunit YedZ TERM 2734 2200188 - 2200226 + T 100 -19.1 -2.87132 | opp_overlap 2200189 2200194, overlap 2200194 TTTATCAATGAGTAA AGAAAACGGCGTTTGCA GGGCA TGCAAACGCCGTTTTCA TATCTGGCGGGAAGA TERM 2735 2200225 - 2200189 - T 100 -22.6 -3.85704 | opp_overlap 2200188 2200194, overlap 2200194 TTATCAATGAGTAAA GAAAACGGCGTTTGCA GGGCA TGCAAACGCCGTTTTC ATATCTGGCGGGAAG TERM 2736 2200194 - 2200220 + T 100 -16.7 -4.39166 | opp_overlap 2200189 2200194, overlap 2200188 AATGAGTAAAGAAAA CGGCGTTTGCA GGGCA TGCAAACGCCG TTTTCATATCTGGCG TERM 2737 2200220 - 2200194 - T 100 -16.7 -4.96388 | opp_overlap 2200194 2200188, overlap 2200189 AATGAGTAAAGAAAA CGGCGTTTGCA GGGCA TGCAAACGCCG TTTTCATATCTGGCG Shewmr7_1867 2200660 - 2200250 - | lactoylglutathione lyase TERM 2738 2201043 - 2201082 + H 100 -15.2 -4.07877 | overlap 2201045 2201049 TCAAATCCCTTCCCA TGCAGAGGCGCTTAAGTC GAAT GATTTAAGCGCCTTTGTG TTATTTCTCCCATAG TERM 2739 2201045 - 2201080 + H 100 -17.8 -3.63097 | overlap 2201043 2201049 AAATCCCTTCCCATG CAGAGGCGCTTAAGTC GAAT GATTTAAGCGCCTTTG TGTTATTTCTCCCAT TERM 2740 2201049 - 2201076 + H 100 -15 -4.42743 | overlap 2201045 2201043 CCCTTCCCATGCAGA GGCGCTTAAGTC GAAT GATTTAAGCGCC TTTGTGTTATTTCTC Shewmr7_1868 2201390 - 2202574 + | cation diffusion facilitator family transporter Shewmr7_1869 2202574 - 2203035 + | MarR family transcriptional regulator TERM 2741 2203071 - 2203086 + F 100 -11.8 -5.40072 | opp_overlap 2203071 TCAGTATTGATTAAA GCGCCC CGAT GGGCGC TTTTTTTGGCGGGCG TERM 2742 2203086 - 2203071 - f 100 -11.8 -3.77196 | opp_overlap 2203071 TCAGTATTGATTAAA GCGCCC CGAT GGGCGC TTTTTTTGGCGGGCG TERM 2743 2204746 - 2204714 - g 82 -11.9 -3.60475 | AAGGCGCATGGCAAA GCACGCCGGTACCCT TTG AGGCCAACGGCGCGC TTACCGTGATGGATA Shewmr7_1870 2203585 - 2205678 + | prolyl oligopeptidase TERM 2744 2205756 - 2205781 + F 100 -9.1 -5.62219 | gap 1, opp_overlap 2205756 TTGGGGAGCAAAAAA CGGTCGAAT-TC ATT GAGATTCGGCCG TTTTTTTAATCTGTT TERM 2745 2205781 - 2205756 - f 88 -6.9 -5.14563 | gap 1, opp_overlap 2205756 TTGGGGAGCAAAAAA CGGTCGAAT-TC ATT GAGATTCGGCCG TTTTTTTAATCTGTT Shewmr7_1871 2205937 - 2207562 + | sulfatase TERM 2746 2207613 - 2207587 - f 100 -13.9 -3.37344 | opp_overlap 2207587 2207591, overlap 2207591 CCCTGAGGGAATCAA CAAAGGAGGAT GCAAT ATCCTCCTTTG TTTTATGCGCGCCAT TERM 2747 2207587 - 2207613 + F 100 -14.6 -4.37092 | opp_overlap 2207587 2207591, overlap 2207591 CCCTGAGGGAATCAA CAAAGGAGGATG CAA TATCCTCCTTTG TTTTATGCGCGCCAT TERM 2748 2207591 - 2207609 + F 100 -9.6 -4.77173 | opp_overlap 2207591 2207587, overlap 2207587 GAGGGAATCAACAAA GGAGGATG CAA TATCCTCC TTTGTTTTATGCGCG TERM 2749 2207609 - 2207591 - f 86 -8.9 -4.33621 | opp_overlap 2207587 2207591, overlap 2207587 GAGGGAATCAACAAA GGAGGAT GCAAT ATCCTCC TTTGTTTTATGCGCG Shewmr7_1872 2207719 - 2208747 + | diguanylate cyclase TERM 2750 2208908 - 2208893 - f 74 -4.8 -4.86621 | opp_overlap 2208886 ACCTTTAATTAAAAA TGTTTA ATGT TAAACA TGATCAATGGGTTAT TERM 2751 2208994 - 2209032 + F 84 -11.2 -3.65224 | opp_overlap 2209007, overlap 2208995 TGCTTTACATCTTTT ATCATCCATATAATAAGC AAT GCTTACTATGTGGATGAC TTATTAAAATGGCAT TERM 2752 2208995 - 2209031 + F 100 -14.7 -2.78813 | opp_overlap 2209007, overlap 2208994 GCTTTACATCTTTTA TCATCCATATAATAAGC AAT GCTTACTATGTGGATGA CTTATTAAAATGGCA Shewmr7_1873 2209041 - 2209469 + | MarR family transcriptional regulator TERM 2753 2209832 - 2209818 - g 76 -11.4 -3.23274 | overlap 2209813 TGGTCGATAAGGCAA GCGCCA AAC TGGCGC AGGTCAAAACCGATT Shewmr7_1874 2209526 - 2210581 + | secretion protein HlyD family protein TERM 2754 2211048 - 2211070 + G 74 -9.8 -3.55444 | overlap 2211054 CAGTTACCCGCCAGA GCGCCATGGT TCG GCCATGGCCC TTTGGGGAGTGGGGG Shewmr7_1875 2210578 - 2212161 + | EmrB/QacA family drug resistance transporter TERM 2755 2212215 - 2212255 + T 100 -13.6 -3.01712 | gap 1, opp_overlap 2212224, overlap 2212224 CGCTAACTGCATGAT AAATAAAAACGCCGCATCT TTTG AG-TGCGGCGTTTTTATTG TGTTCAGCGAACCGA TERM 2756 2212224 - 2212246 + T 100 -9.9 -5.29716 | gap 1, opp_overlap 2212224, overlap 2212215 CATGATAAATAAAAA CGCCGCATCT TTTG AG-TGCGGCG TTTTTATTGTGTTCA TERM 2757 2212246 - 2212224 - T 100 -9.9 -5.40464 | gap 1, opp_overlap 2212224 2212215 CATGATAAATAAAAA CGCCGCA-TC TTTT GAGTGCGGCG TTTTTATTGTGTTCA Shewmr7_1876 2215024 - 2212283 - | CoA-binding domain-containing protein TERM 2758 2213597 - 2213617 + g 82 -6.8 -4.8622 | ATTGTCGGGGATCGA CTGCGGCA CTTCC TGCAGCAG TTTTTGGTTACGGCG Shewmr7_1877 2215251 - 2216387 + | methyl-accepting chemotaxis sensory transducer Shewmr7_1878 2216403 - 2216696 + | anti-sigma-factor antagonist TERM 2759 2217253 - 2217274 + G 73 -2.9 -4.98128 | opp_overlap 2217256, overlap 2217239 2217254 GCGATATTATTCTTA ATACCGTTG GTCC CAACGGAAA TTTCTTTTTAATTAT TERM 2760 2217630 - 2217646 + G 71 -6.5 -4.19238 | TCTCCCAGTGCATTT GTGGCCA ATA TTGCCAC TTTTCCCATTCCGCG Shewmr7_1879 2216697 - 2218400 + | response regulator receiver protein Shewmr7_1880 2218401 - 2218766 + | response regulator receiver protein Shewmr7_1881 2218785 - 2220995 + | CheA signal transduction histidine kinases Shewmr7_1882 2221010 - 2221522 + | CheW protein TERM 2761 2222489 - 2222501 + G 70 -9.1 -3.53563 | GGGTGTTGATGGCGC TCGCC GAA GGCGA TTTAACCACGCGTAT TERM 2762 2223288 - 2223273 - g 71 -10.4 -3.05844 | GGCCTTAGTGGAAGA GGCTGC CGCC GCAGCC GAAAGCATGCAATCG Shewmr7_1883 2221528 - 2223498 + | methyl-accepting chemotaxis sensory transducer Shewmr7_1884 2223499 - 2224329 + | MCP methyltransferase, CheR-type Shewmr7_1885 2224330 - 2224950 + | chemoreceptor glutamine deamidase CheD TERM 2763 2225441 - 2225476 + G 73 -6 -4.4727 | gap 1, opp_overlap 2225434 2225438 TCAACACACAATTGG TGGCAATCGGCGCCTCC ACT GGCGGTACCGAA-GCCA TTTTGTCGCTGTTAC Shewmr7_1886 2224954 - 2226009 + | response regulator receiver modulated CheB methylesterase TERM 2764 2226010 - 2225985 - T 88 -12.7 -2.73468 | overlap 2225976 2225973 TAAGATGCTCAATTA TTTAGCCTCGC TTAA GCGAGACTAAA AGCACTGACAACGTC Shewmr7_1887 2227876 - 2226242 - | response regulator receiver modulated diguanylate cyclase TERM 2765 2227760 - 2227772 + g 73 -3.3 -5.00616 | opp_overlap 2227761, overlap 2227761 GACCGCCGACAGCAT ATGGC TCT GCCAG TTTTTTCGAAGCGAG TERM 2766 2228183 - 2228168 - H 73 -5.4 -4.71426 | TGGGCATTAACAAAA CCGTAC AGGA GTACAG ACAGAGTGAAGGGAC TERM 2767 2228364 - 2228340 - gH 78 -9.3 -3.65351 | GTATTCTTATCCAAA GTGAGATGCAA GAT TGGCATCCCAC TACGCCGCGCTACCA Shewmr7_1888 2228189 - 2228926 + | hypothetical protein Shewmr7_1889 2228850 - 2229269 + | hypothetical protein Shewmr7_1890 2229368 - 2229817 + | activator of Hsp90 ATPase family protein TERM 2768 2229885 - 2229913 + T 89 -7.4 -5.06414 | opp_overlap 2229885 GGGGGATATAAAAAA GACGCTTATCTC GAGTA GAGTGAAGCGTC TTTTTATTAGGCAAC TERM 2769 2229913 - 2229885 - T 91 -7.4 -5.36441 | opp_overlap 2229885 GGGGGATATAAAAAA GACGCTTATCTC GAGTA GAGTGAAGCGTC TTTTTATTAGGCAAC TERM 2770 2229977 - 2229962 - T 74 -7.6 -3.98484 | opp_overlap 2229962, overlap 2229941 AAGGCAATGGATAAA GCCTTT TAAA AAAGGC TTATCGCACAGCTGC Shewmr7_1891 2231589 - 2229997 - | ABC transporter related TERM 2771 2230131 - 2230153 + g 84 -11.4 -3.94 | opp_overlap 2230130 2230129 TGACGAAAATCAATG TGCCTTCAAA ATC TTTGAGGGCA TTATTTAAGGATTCA TERM 2772 2231771 - 2231753 - R 100 -11.7 -4.91473 | opp_overlap 2231753 CAAGGCAAAAACAAA CCGAGCC ACTTG GGCTCGG TTATCATTCGTCTCG TERM 2773 2231753 - 2231771 + r 89 -11.7 -3.55487 | opp_overlap 2231753 CAAGGCAAAAACAAA CCGAGCC ACTTG GGCTCGG TTATCATTCGTCTCG Shewmr7_1892 2233780 - 2231819 - | 3-phytase TERM 2774 2232121 - 2232131 + g 79 -6.8 -4.62783 | GGCTGGACACCACCA GCAG ATC CTGC TTTTTACCCTGAATA TERM 2775 2232569 - 2232580 + g 87 -7.2 -5.00616 | TCTTAAGGTCGCCAC CGCG ATAT CGCG TTTTTTACCGCCCAG TERM 2776 2232701 - 2232714 + g 74 -2.3 -5.09426 | opp_overlap 2232682, overlap 2232696 CCAACGTTTGTTGGT GCCAA GCAC TAGGC TTTTTTCCGGTTGAG Shewmr7_1893 2236631 - 2233806 - | TonB-dependent receptor TERM 2777 2235413 - 2235429 + g 70 -4.4 -4.71426 | ATGAGCGAGTGGTTT TGCCTT GGCCG AGGGCA TTTTCTTGCTGCGGC TERM 2778 2236386 - 2236372 - G 76 -3.4 -5.13354 | overlap 2236373 CCGACAAAAAAGAAA CGGCCA TCA CGGCCT GCCTGCTGGCTAAGG TERM 2779 2236836 - 2236814 - H 71 -7 -4.18762 | opp_overlap 2236817 AAGGCTGAGCCAAAA TGACGCTTAC AGA ATCAGCGTCA TATAAGAAGGCGTTG Shewmr7_1894 2237283 - 2238248 + | diguanylate cyclase Shewmr7_1895 2238248 - 2239471 + | AraC family transcriptional regulator TERM 2780 2240201 - 2240212 + G 74 -7.2 -4.18018 | overlap 2240181 TAAGGCGTTTTCGCG CGCC ACGG GGCG TTTTAAGTGCGCCAG Shewmr7_1896 2239815 - 2240597 + | hypothetical protein Shewmr7_1897 2241564 - 2240608 - | hypothetical protein Shewmr7_1898 2242639 - 2241818 - | beta-lactamase domain-containing protein TERM 2781 2242913 - 2242927 + G 73 -5 -4.614 | overlap 2242892 GGTATCTTTGCCCAT CTGGAT TTT ATTCAG TTTTATCTGCTTAAC Shewmr7_1899 2242854 - 2244023 + | PepSY-associated TM helix domain-containing protein Shewmr7_1900 2244023 - 2244487 + | hypothetical protein TERM 2782 2244679 - 2244649 - T 73 -9.8 -2.91276 | opp_overlap 2244649 2244654, overlap 2244654 TTGTGGGGTAGAAAG TAAAAGGCCATCTA ATT TTGATGGCCTTTTC TTTGGTTAAACAACT TERM 2783 2244649 - 2244679 + T 84 -9.8 -3.90291 | opp_overlap 2244649 2244654, overlap 2244654 TTGTGGGGTAGAAAG TAAAAGGCCATCTA ATT TTGATGGCCTTTTC TTTGGTTAAACAACT TERM 2784 2244674 - 2244654 - T 100 -9.7 -4.61873 | opp_overlap 2244649 2244654, overlap 2244649 GGGTAGAAAGTAAAA GGCCATCTA ATT TTGATGGCC TTTTCTTTGGTTAAA TERM 2785 2244654 - 2244674 + T 100 -9.7 -4.99947 | opp_overlap 2244654 2244649, overlap 2244649 GGGTAGAAAGTAAAA GGCCATCTA ATT TTGATGGCC TTTTCTTTGGTTAAA Shewmr7_1901 2247075 - 2244706 - | sulfatase TERM 2786 2245436 - 2245453 + g 76 -6.3 -4.66953 | AGTTCCCATTTATCA GTTTGCA GAGT TGCGAAC TTTTTAGAGTCTTCC Shewmr7_1902 2248313 - 2247081 - | radical SAM domain-containing protein Shewmr7_1903 2248510 - 2249427 + | LysR family transcriptional regulator Shewmr7_1904 2249576 - 2249842 + | hypothetical protein TERM 2787 2249945 - 2249911 - T 86 -11.6 -3.39884 | opp_overlap 2249913 2249916, overlap 2249913 2249916 AAACAGCACTCATAA CACAAGGGCTTTCA GCAAGAT TGAAAGCCCTTGTT ACTACTTGTTCATTC TERM 2788 2249943 - 2249913 - T 100 -14.2 -3.26164 | opp_overlap 2249913 2249916, overlap 2249911 2249916 ACAGCACTCATAACA CAAGGGCTTTCA GCAAGAT TGAAAGCCCTTG TTACTACTTGTTCAT TERM 2789 2249913 - 2249943 + T 100 -14.9 -3.33573 | opp_overlap 2249913 2249911 2249916, overlap 2249916 ACAGCACTCATAACA CAAGGGCTTTCAG CAAGA TTGAAAGCCCTTG TTACTACTTGTTCAT TERM 2790 2249940 - 2249916 - T 84 -10.1 -3.76568 | opp_overlap 2249913 2249916, overlap 2249913 2249911 GCACTCATAACACAA GGGCTTTCA GCAAGAT TGAAAGCCC TTGTTACTACTTGTT TERM 2791 2249916 - 2249940 + T 88 -10.8 -3.79396 | opp_overlap 2249916 2249913 2249911, overlap 2249913 GCACTCATAACACAA GGGCTTTCAG CAAGA TTGAAAGCCC TTGTTACTACTTGTT Shewmr7_1905 2250640 - 2249999 - | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase TERM 2792 2250467 - 2250494 + g 77 -10.6 -3.63515 | opp_overlap 2250454 ACTGTGGGCGGTATT GGCGACTGGAAA CAGT TTATCAGTCGCC TTATTCACGCTCACA TERM 2793 2250647 - 2250690 + r 73 -9 -3.51924 | opp_overlap 2250658, overlap 2250649 2250650 2250658 TTGATTCATAGTGAT CCTTGTAAGTAGTGGGTTTA ACGC TAAACCCACTACTTAAGCTG TTATCTCAATAAGGG TERM 2794 2250649 - 2250688 + r 78 -10.2 -3.33525 | opp_overlap 2250658, overlap 2250647 2250650 2250658 GATTCATAGTGATCC TTGTAAGTAGTGGGTTTA ACGC TAAACCCACTACTTAAGC TGTTATCTCAATAAG TERM 2795 2250650 - 2250687 + r 93 -13.7 -2.59793 | opp_overlap 2250658, overlap 2250649 2250647 2250658 ATTCATAGTGATCCT TGTAAGTAGTGGGTTTA ACGC TAAACCCACTACTTAAG CTGTTATCTCAATAA TERM 2796 2250658 - 2250679 + r 81 -11.7 -2.75803 | opp_overlap 2250658, overlap 2250650 2250649 2250647 TGATCCTTGTAAGTA GTGGGTTTA ACGC TAAACCCAC TACTTAAGCTGTTAT TERM 2797 2250679 - 2250658 - R 80 -11.7 -2.71364 | opp_overlap 2250650 2250649 2250647 2250658 TGATCCTTGTAAGTA GTGGGTTTA ACGC TAAACCCAC TACTTAAGCTGTTAT Shewmr7_1906 2251405 - 2250707 - | SoxR-reducing system protein RsxE Shewmr7_1907 2252024 - 2251398 - | electron transport complex protein RnfG TERM 2798 2251637 - 2251651 + g 71 -7.1 -4.24342 | GTAAATCGATTTTAT CCCCA AGGCC TGGGG TTTCTTGGTGGGCGA TERM 2799 2251898 - 2251932 + g 70 -8.5 -3.79162 | overlap 2251894 2251894 CAGGGATCAGCTGAT GCAGCACGCGCATCA ATTCC TGCTGCTCTTGCTGC TTAATTTTGTCTAAG Shewmr7_1908 2253139 - 2252090 - | electron transport complex, RnfABCDGE type, D subunit TERM 2800 2252937 - 2252950 + g 70 -8.1 -3.72576 | AAGCTTGCTTTGATG CTGCG GTTA CGCAG TTTCATCACCGCGGC TERM 2801 2253041 - 2253029 - G 79 -6.9 -4.62069 | GCCCCAGCCGAAAAA GGCGC ATT GCACC ACAAGGCCGGGTAAC TERM 2802 2253220 - 2253196 - R 84 -10.7 -3.59315 | opp_overlap 2253194 2253191 2253196 CTAATCATTTTTAAA GCACTGAGGTT AAA ACCCCCAGTGC TATTCATTTGCGTCG Shewmr7_1909 2255619 - 2253220 - | electron transport complex protein RnfC TERM 2803 2253480 - 2253492 + g 100 -6.9 -5.22039 | CAGTCGACTCAGCCT GCTGC GCG GCGGC TTTTTTGGCTTTCGC TERM 2804 2253517 - 2253535 + g 73 -3.1 -4.98436 | gap 1, overlap 2253504 TTTCGCGCGGGCAAC GGCCGCAG CGAT CT-TGGCC TTTTTCTCATCTTCA TERM 2805 2253800 - 2253816 + g 78 -2.1 -5.22943 | overlap 2253794 2253801 2253810 2253811 CCATTGGCATCCGAG TCGGCCT TTA ACGCCGC TTTTTTCGCTTTGGT TERM 2806 2253950 - 2253963 + g 87 -9.5 -4.29326 | TCATCCGCCCCTTGA GCCGC AGCG GCGGC TTTCTTGGCTTTAGC TERM 2807 2254081 - 2254132 + g 81 -6.4 -4.91712 | gap 1, overlap 2254098 ATCGGCGGTGTTTTC TGCCGCTGCTGCCTTTTTGGCCGCG ATC CGC-GCCATAGCTTCGGCAACGGCA TTTTTATCCGTTGAG TERM 2808 2254192 - 2254203 + g 78 -2.2 -5.29445 | TTCCTTAGCCTTGGC TTCG CGGG CGAG TTTTTCTTCTTCGAG TERM 2809 2255448 - 2255461 + g 71 -6.7 -4.15006 | TGTCACCCACTTTGA CTGCA AGGG TGCAG TTTTCGCCTACCTGT Shewmr7_1910 2256204 - 2255623 - | electron transport complex protein RnfB Shewmr7_1911 2256783 - 2256205 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2810 2256765 - 2256737 - G 95 -11.9 -4.23781 | TTCACTAAAACGAAA TTGTTAACCAGCA CTG TGCTGATCAACAA CAGGAGATATTCACT Shewmr7_1912 2258813 - 2256909 - | diguanylate cyclase/phosphodiesterase TERM 2811 2259900 - 2259914 + H 73 -5.6 -4.46212 | AAGTGTATTTGAGTG GCAACG AAT CGATGC TTTTGTGGTCAAAAC Shewmr7_1913 2260154 - 2260357 + | hypothetical protein Shewmr7_1914 2261054 - 2263075 + | excinuclease ABC subunit B TERM 2812 2263158 - 2263184 + T 91 -7.3 -5.38951 | gap 1, opp_overlap 2263137 2263158 CTACTTAATAAAAAA GCCGCCAACATA ATCA TATGA-GGCGGC TTTTTTGTATGGATT TERM 2813 2263184 - 2263158 - T 95 -7.3 -5.4833 | gap 1, opp_overlap 2263158, overlap 2263137 CTACTTAATAAAAAA GCCGCCAACATA ATCA TATGA-GGCGGC TTTTTTGTATGGATT Shewmr7_1915 2263834 - 2263217 - | rhomboid family protein Shewmr7_1916 2264550 - 2263831 - | queuosine biosynthesis protein QueC TERM 2814 2264030 - 2264043 + g 76 -8.1 -4.15222 | TATTTATCGGCCAGC GCCCA AGTT TGGGC TTTGTTGAGCCACAT Shewmr7_1917 2264739 - 2265407 + | radical activating enzyme TERM 2815 2265439 - 2265454 + F 100 -8.2 -5.4833 | TGCACTCTTCTTTAA CGCTCC GAAT GGGGCG TTTTTTATTGGCTAA TERM 2816 2265690 - 2265724 + F 100 -13.8 -3.71517 | ACATATTTTCTTCAA CTTTTAAGTCTGACTC ATC GAGTCTGATTTAAAAG TTATCTTAAATCTTG Shewmr7_1918 2266139 - 2266627 + | hypothetical protein Shewmr7_1919 2266865 - 2267152 + | hypothetical protein TERM 2817 2269028 - 2269038 + G 74 -2.4 -5.14563 | overlap 2269025 TGCATGTTAATGTGT CGGC GCG GCAG TTTTTTAGTGGAAAC Shewmr7_1920 2267344 - 2269527 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 2818 2269556 - 2269593 + T 100 -15.9 -2.92425 | opp_overlap 2269561 2269566, overlap 2269561 2269566 TCGTACAGGTGATAT AAAAACAAAAGGCAATC AATC GATTGCCTTTTGTTTTA TCTGTGGACTTGGTT TERM 2819 2269588 - 2269561 - T 100 -15.8 -4.9792 | opp_overlap 2269556 2269561 2269566, overlap 2269566 CAGGTGATATAAAAA CAAAAGGCAATC AATC GATTGCCTTTTG TTTTATCTGTGGACT TERM 2820 2269561 - 2269588 + T 100 -15.8 -4.61199 | opp_overlap 2269561 2269566, overlap 2269556 2269566 CAGGTGATATAAAAA CAAAAGGCAATC AATC GATTGCCTTTTG TTTTATCTGTGGACT TERM 2821 2269583 - 2269566 - T 100 -9.9 -5.38839 | opp_overlap 2269561 2269556 2269566, overlap 2269561 GATATAAAAACAAAA GGCAATC AATC GATTGCC TTTTGTTTTATCTGT TERM 2822 2269566 - 2269583 + T 100 -9.9 -5.24647 | opp_overlap 2269566 2269561, overlap 2269561 2269556 GATATAAAAACAAAA GGCAATC AATC GATTGCC TTTTGTTTTATCTGT Shewmr7_1921 2270101 - 2269607 - | SecC motif-containing protein TERM 2823 2270122 - 2270134 + r 86 -2.7 -5.80951 | TAATGCTTTAAAATA TAGTA GAT TACTG TTTTTTCTTTTGGCT Shewmr7_1922 2270707 - 2270129 - | hypothetical protein TERM 2824 2270474 - 2270457 - G 78 -4.1 -5.09225 | overlap 2270469 ATTTTATCGAAAAAA CGTTGGT AAAT AGCAACG ATACTGTCGCGGCCA Shewmr7_1923 2270840 - 2271430 + | Smr protein/MutS2 TERM 2825 2271528 - 2271500 - T 100 -13.3 -4.66833 | opp_overlap 2271505, overlap 2271505 GCCGAAGCTTAAAAA GAAAATGCCCAAC ATC GTTGGGCATTTTT ATCGGTTACATTTTC TERM 2826 2271523 - 2271505 - T 100 -13.2 -5.27023 | opp_overlap 2271505, overlap 2271500 AGCTTAAAAAGAAAA TGCCCAAC ATC GTTGGGCA TTTTTATCGGTTACA TERM 2827 2271505 - 2271523 + T 100 -13.2 -4.91712 | opp_overlap 2271505 2271500 AGCTTAAAAAGAAAA TGCCCAAC ATC GTTGGGCA TTTTTATCGGTTACA Shewmr7_1924 2273463 - 2271601 - | peptidyl-dipeptidase A TERM 2828 2273870 - 2273905 + G 74 -9.8 -3.64703 | gap 1 AGCCCGCTATTTAGA CGTGTTTATGCCCGCCG CAT CGACGGCCATAAA-ACG TTTACATACCGCGCC Shewmr7_1925 2273682 - 2274320 + | TetR family transcriptional regulator TERM 2829 2275818 - 2275802 - g 79 -9.4 -4.18018 | CGCGGCGATGGAAAA CGAGCG TGATG CGCTCG AGCGTTTCGACTCGC Shewmr7_1926 2274336 - 2276615 + | acyl-CoA dehydrogenase TERM 2830 2276663 - 2276692 + T 100 -12.3 -4.67904 | opp_overlap 2276669, overlap 2276669 AGCCTGACAAGATAT AAAAAACCACCTC AATT GAGGTGGTTTTTG TTTTTAAGCTTGATG TERM 2831 2276686 - 2276669 - T 100 -11.3 -5.48787 | opp_overlap 2276663 2276669 ACAAGATATAAAAAA CCACCTC AATT GAGGTGG TTTTTGTTTTTAAGC TERM 2832 2276669 - 2276686 + T 100 -11.3 -5.61881 | opp_overlap 2276669, overlap 2276663 ACAAGATATAAAAAA CCACCTC AATT GAGGTGG TTTTTGTTTTTAAGC Shewmr7_1927 2278194 - 2276755 - | pyruvate kinase TERM 2833 2277934 - 2277945 + g 91 -4.4 -5.66338 | opp_overlap 2277934 GTAGGCTTGACCTAA GTTC AGTT GAAC TTTTTTGTTGTCTTT Shewmr7_1928 2279233 - 2278379 - | DNA-binding transcriptional regulator HexR TERM 2834 2280803 - 2280790 - g 70 -4.5 -4.61231 | gap 1, opp_overlap 2280801 GGATACCTTTAAAAA CGAGCG TAT CGC-CG ATGCTTACGAGCGTC Shewmr7_1929 2279546 - 2281018 + | glucose-6-phosphate 1-dehydrogenase Shewmr7_1930 2281028 - 2281726 + | 6-phosphogluconolactonase Shewmr7_1931 2281739 - 2283565 + | phosphogluconate dehydratase TERM 2835 2283802 - 2283771 - g 73 -12.4 -2.50195 | gap 1, opp_overlap 2283781, overlap 2283781 AGCTATCACTAAGAT CGCCCAAGAAGTGCC TGA GGCACTTGTTGG-CG CTGGTACCATTTTAA TERM 2836 2283781 - 2283793 + G 70 -9.1 -3.63991 | opp_overlap 2283771 2283781 AAGATCGCCCAAGAA GTGCC TGA GGCAC TTGTTGGCGCTGGTA TERM 2837 2283793 - 2283781 - g 70 -9.1 -3.63341 | opp_overlap 2283781, overlap 2283771 AAGATCGCCCAAGAA GTGCC TGA GGCAC TTGTTGGCGCTGGTA Shewmr7_1932 2283586 - 2284227 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2838 2284283 - 2284256 - T 100 -14.4 -3.38118 | opp_overlap 2284256 2284263, overlap 2284263 AGAACGCACTGATAA TAAAAAACCACC GCAA GGTGGTTTTTTA TTGCCTGTTCAGCGC TERM 2839 2284256 - 2284283 + T 100 -14.4 -3.1855 | opp_overlap 2284256 2284263, overlap 2284263 AGAACGCACTGATAA TAAAAAACCACC GCAA GGTGGTTTTTTA TTGCCTGTTCAGCGC TERM 2840 2284276 - 2284263 - T 100 -8.1 -5.56673 | opp_overlap 2284256 2284263, overlap 2284256 ACTGATAATAAAAAA CCACC GCAA GGTGG TTTTTTATTGCCTGT TERM 2841 2284263 - 2284276 + T 100 -8.1 -5.49234 | opp_overlap 2284263 2284256, overlap 2284256 ACTGATAATAAAAAA CCACC GCAA GGTGG TTTTTTATTGCCTGT Shewmr7_1933 2285638 - 2284298 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein Shewmr7_1934 2286251 - 2285664 - | hypothetical protein TERM 2842 2286423 - 2286399 - R 100 -13.7 -5.60864 | opp_overlap 2286403 CACACAGCAAAAAAA TAAAGCGACCC AGA GGATCGCTTTA GATGATGTGACTTAA TERM 2843 2286403 - 2286419 + r 70 -7.9 -3.70149 | opp_overlap 2286399 CAGCAAAAAAATAAA GCGACCC AGA GGATCGC TTTAGATGATGTGAC Shewmr7_1935 2287681 - 2286467 - | aminotransferase AlaT TERM 2844 2287262 - 2287242 - G 72 -9.7 -3.40403 | opp_overlap 2287242 GCGTCTTCATCACAA CGGTAATGC ACC GCTTTACCG CCGGCGAGATTGGCC TERM 2845 2288592 - 2288607 + G 70 -9 -3.54779 | CATTAAAAGTCATGG CCGATG AAAC CATCGG TTGGTTGATTTTAGT Shewmr7_1936 2288420 - 2289802 + | Na+/H+ antiporter NhaC TERM 2846 2289851 - 2289816 - T 100 -15 -3.68341 | opp_overlap 2289819 2289827, overlap 2289819 2289827 AATGCGATGCAATAA CTATAAAAAAACCAGC TACG GCTGGTTTTTTTATTG CTTACGTTTATTGCT TERM 2847 2289819 - 2289848 + T 100 -15.3 -3.44891 | opp_overlap 2289819 2289816 2289827, overlap 2289827 GCGATGCAATAACTA TAAAAAAACCAGC TACG GCTGGTTTTTTTA TTGCTTACGTTTATT TERM 2848 2289848 - 2289819 - T 100 -15.3 -2.94872 | opp_overlap 2289819 2289827, overlap 2289816 2289827 GCGATGCAATAACTA TAAAAAAACCAGC TACG GCTGGTTTTTTTA TTGCTTACGTTTATT TERM 2849 2289840 - 2289827 - T 100 -8.1 -5.73339 | opp_overlap 2289827 2289819, overlap 2289819 2289816 ATAACTATAAAAAAA CCAGC TACG GCTGG TTTTTTTATTGCTTA TERM 2850 2289827 - 2289840 + T 100 -8.1 -5.87996 | opp_overlap 2289819 2289816 2289827, overlap 2289819 ATAACTATAAAAAAA CCAGC TACG GCTGG TTTTTTTATTGCTTA TERM 2851 2290054 - 2290037 - T 100 -11.3 -5.4833 | opp_overlap 2290037 TGAGGCAATAAAAAA GCCAGTG TAGG CACTGGC TTTTATCTGGGAGTG TERM 2852 2290037 - 2290054 + T 100 -11.3 -4.53303 | opp_overlap 2290037 TGAGGCAATAAAAAA GCCAGTG TAGG CACTGGC TTTTATCTGGGAGTG Shewmr7_1937 2290640 - 2290080 - | elongation factor P Shewmr7_1938 2291866 - 2290685 - | hypothetical protein TERM 2853 2291525 - 2291538 + g 70 -8.1 -3.7511 | ATTCAGCCATACGGG CACCG CTTG CGGTG TTGTGTTGTGCAGCG TERM 2854 2291936 - 2291901 - R 100 -15.7 -2.85847 | opp_overlap 2291911, overlap 2291903 2291911 AATCGGGAGATCACA CATAAAAAAAGCGGC GTTTCG GCCGCTTTTTTTACG GAGCTGTGCTTAGTC TERM 2855 2291934 - 2291903 - R 100 -14.7 -2.97747 | opp_overlap 2291911, overlap 2291901 2291911 TCGGGAGATCACACA TAAAAAAAGCGGC GTTTCG GCCGCTTTTTTTA CGGAGCTGTGCTTAG TERM 2856 2291911 - 2291926 + r 91 -7.5 -5.40474 | opp_overlap 2291911 2291903 2291901 TCACACATAAAAAAA GCGGC GTTTCG GCCGC TTTTTTTACGGAGCT TERM 2857 2291926 - 2291911 - R 100 -7.5 -5.76633 | opp_overlap 2291911, overlap 2291903 2291901 TCACACATAAAAAAA GCGGC GTTTCG GCCGC TTTTTTTACGGAGCT TERM 2858 2291941 - 2291971 + r 79 -7.7 -4.27474 | CTTTTTTTACGGAGC TGTGCTTAGTC TTCGAACTC GGCTAAGCACA TTTCTTCATAAATTT Shewmr7_1939 2292473 - 2291946 - | flavodoxin FldA TERM 2859 2292327 - 2292347 + g 74 -8.3 -4.04413 | overlap 2292317 GATGCCGAACAGCAG CAGGTCGTA TTC TGCGATCTG TTCTTTGGTGCTCTT Shewmr7_1940 2292801 - 2292529 - | LexA regulated protein Shewmr7_1941 2293034 - 2292813 - | hypothetical protein TERM 2860 2292881 - 2292867 - G 79 -9.2 -4.15222 | ACCTTTTGCAATAAA CCCGGC GCA GCCGAG AAATAACACTAACCA Shewmr7_1942 2293936 - 2293136 - | alpha/beta hydrolase fold TERM 2861 2294058 - 2294071 + H 70 -3.8 -4.7629 | overlap 2294069 TGTGCTAATTTGATG TGCG ATTTCA CGCA TTTTTAGATTAATGA Shewmr7_1943 2294208 - 2294759 + | replication initiation regulator SeqA TERM 2862 2294772 - 2294789 + F 100 -12.7 -3.87149 | TAACGCCTTTATCGA CGCCGCA ATGA TGCGGCG TTTCCATTTAATAAC TERM 2863 2296064 - 2296076 + G 74 -4.7 -4.81814 | GCTCGACTTGGTGTA CCGAC AAA GACGG TTTTATTCTGGTACT Shewmr7_1944 2294830 - 2296482 + | phosphoglucomutase TERM 2864 2296464 - 2296482 + T 75 -8.8 -3.60792 | opp_overlap 2296467, overlap 2296467 2296470 ACAGGCCTTGATTGA TAAGGCGC TTA GCGCCTGA TTTAGCAGTTAAGCA TERM 2865 2296479 - 2296467 - T 78 -10.5 -3.35679 | opp_overlap 2296464 2296467 2296470 GGCCTTGATTGATAA GGCGC TTA GCGCC TGATTTAGCAGTTAA TERM 2866 2296467 - 2296479 + T 76 -10.5 -2.92667 | opp_overlap 2296467, overlap 2296464 2296470 GGCCTTGATTGATAA GGCGC TTA GCGCC TGATTTAGCAGTTAA TERM 2867 2296517 - 2296543 + T 100 -8.7 -5.27335 | opp_overlap 2296517 TTTACCGATAAAAAA CGCACTCATGG AAATC CTCTGAGTGCG TTTTTATTTGCAGCG TERM 2868 2296543 - 2296517 - T 91 -7.3 -5.28176 | gap 1, opp_overlap 2296517 TTTACCGATAAAAAA CGCACTCA-TGG AAAT CCTCTGAGTGCG TTTTTATTTGCAGCG TERM 2869 2296617 - 2296631 + T 70 -7.2 -3.83568 | overlap 2296621 CAATACTCGAGATGG CAACTT GGT AAGTTG TTCTTATCGATATAG Shewmr7_1945 2297080 - 2296601 - | peptide methionine sulfoxide reductase Shewmr7_1946 2297358 - 2298392 + | succinylglutamate desuccinylase Shewmr7_1947 2298555 - 2299733 + | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) TERM 2870 2300413 - 2300397 - g 73 -5 -4.72386 | GAAATCATCGAAAAA GCGGCC GACAT GGCGGC AAAAGAGGGGATTTC Shewmr7_1948 2299737 - 2300714 + | transketolase, central region TERM 2871 2301699 - 2301664 - g 70 -4.9 -4.62069 | overlap 2301667 CCGTGATGGCAAAAA TGATG-GTGGAATCGGT ATCC ACC-ATTCCACACTTCA CCTATTGCGAAGAGT Shewmr7_1949 2300724 - 2302319 + | dihydrolipoamide acetyltransferase TERM 2872 2302360 - 2302377 + F 100 -8.4 -5.4505 | opp_overlap 2302360 2302352 CAATCCAGCAAAAAA GGACGC AATTTA GCGTCC TTTTTTATTCGCAGG TERM 2873 2302377 - 2302360 - f 100 -8.4 -5.18357 | opp_overlap 2302360, overlap 2302352 CAATCCAGCAAAAAA GGACGC AATTTA GCGTCC TTTTTTATTCGCAGG Shewmr7_1950 2302464 - 2303537 + | quinolinate synthetase TERM 2874 2303594 - 2303565 - f 74 -4.9 -4.76644 | opp_overlap 2303570, overlap 2303570 AACACTCACGAAAAA TGAAATCCCTGCC ACTT GGCGGGGATTTTT GTATCGGTTCAAATT TERM 2875 2303589 - 2303570 - f 88 -9.2 -4.35327 | opp_overlap 2303570, overlap 2303565 TCACGAAAAATGAAA TCCCTGCC ACTT GGCGGGGA TTTTTGTATCGGTTC TERM 2876 2303570 - 2303589 + F 100 -11.4 -5.00642 | opp_overlap 2303570 2303565 TCACGAAAAATGAAA TCCCTGCC ACTT GGCGGGGA TTTTTGTATCGGTTC TERM 2877 2304069 - 2304053 - g 71 -5.1 -4.56914 | TGATCCAAAGGAAAA GGACG GAAAAAT CGTCC CTGCTGGCGCGGCAG TERM 2878 2304132 - 2304115 - g 71 -11.3 -2.83403 | overlap 2304114 CTGCCGCCACGAAAG CCCATGG CACG CCATGGG GAGAAGGGCATTTAG Shewmr7_1951 2303823 - 2304335 + | superoxide dismutase, copper/zinc binding protein TERM 2879 2304440 - 2304423 - T 100 -14.1 -6.07627 | opp_overlap 2304423 ATCGGTAAAAAAAAA GCCCCGC AAGA GCGGGGC TTTTTGATAAAGAAG TERM 2880 2304423 - 2304440 + T 100 -14.1 -4.72272 | opp_overlap 2304423 ATCGGTAAAAAAAAA GCCCCGC AAGA GCGGGGC TTTTTGATAAAGAAG Shewmr7_1952 2305471 - 2304461 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2881 2304820 - 2304837 + g 74 -6.9 -4.42238 | opp_overlap 2304817 2304816 2304820 GTACAACTAAACCTA CTGCCGC AGCA GCGCCAG TTTTAGTTGGGATCA Shewmr7_1953 2306571 - 2305684 - | hypothetical protein Shewmr7_1954 2306778 - 2308211 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2882 2308258 - 2308243 - f 100 -11.8 -5.08088 | opp_overlap 2308243 AACGTCTAAGAAAAA GCGCCC AGTA GGGCGC TTTTTTTATGGCATG TERM 2883 2308243 - 2308258 + F 100 -11.8 -5.626 | opp_overlap 2308243 AACGTCTAAGAAAAA GCGCCC AGTA GGGCGC TTTTTTTATGGCATG TERM 2884 2308793 - 2308773 - f 75 -10.5 -2.89742 | overlap 2308776 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGGTAACAGCGTGC TERM 2885 2308790 - 2308776 - f 73 -8.6 -3.5947 | overlap 2308773 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGGTAACAGCG TERM 2886 2308866 - 2308847 - f 100 -12.2 -5.5208 | opp_overlap 2308847 CCATAACATAAAAAA GGCCTAAC ACAC GTTAGGCC TTTTTTATTGCCAAA TERM 2887 2308847 - 2308866 + F 100 -12.2 -5.4505 | opp_overlap 2308847 CCATAACATAAAAAA GGCCTAAC ACAC GTTAGGCC TTTTTTATTGCCAAA Shewmr7_1955 2309130 - 2310323 + | aromatic amino acid aminotransferase TERM 2888 2310374 - 2310391 + T 100 -11.3 -4.87318 | opp_overlap 2310374 AGGGCTCACTAAAAA GGACAGC TTAG GCTGTCC TTTTTGCATTTTGAG TERM 2889 2310391 - 2310374 - T 100 -11.3 -4.7254 | opp_overlap 2310374 AGGGCTCACTAAAAA GGACAGC TTAG GCTGTCC TTTTTGCATTTTGAG Shewmr7_1956 2311388 - 2310465 - | hypothetical protein TERM 2890 2310751 - 2310737 - G 76 -5.6 -4.88736 | GATTATCGATAAAAA CCACGG GCG CAGTGG TCATCGCTAAGGCTT Shewmr7_1957 2311706 - 2312518 + | bax protein, putative Shewmr7_1958 2312511 - 2313134 + | hypothetical protein TERM 2891 2313144 - 2313186 + T 100 -14.5 -3.02211 | gap 1, opp_overlap 2313147 2313151 2313158, overlap 2313146 2313158 AAGTAACGATAGATT TAAGCTATAAAAAAGCCCAC TCTC GTGGGCTTTTTTAT-GCGTA TCTCGTTTAGGCTTC TERM 2892 2313146 - 2313184 + T 93 -12.7 -3.06037 | gap 1, opp_overlap 2313147 2313151 2313158, overlap 2313144 2313158 GTAACGATAGATTTA AGCTATAAAAAAGCCCAC TCTC GTGGGCTTTTTTAT-GCG TATCTCGTTTAGGCT TERM 2893 2313183 - 2313147 - T 100 -16.2 -3.17685 | gap 1, opp_overlap 2313146 2313144 2313158, overlap 2313151 2313158 TAACGATAGATTTAA GCTATAAAAAAGCCCAC TCTC GTGGGCTTTTTTAT-GC GTATCTCGTTTAGGC TERM 2894 2313180 - 2313151 - T 100 -16.7 -2.56571 | opp_overlap 2313146 2313144 2313158, overlap 2313147 2313158 GATAGATTTAAGCTA TAAAAAAGCCCAC TCTC GTGGGCTTTTTTA TGCGTATCTCGTTTA TERM 2895 2313173 - 2313158 - T 100 -10.4 -5.31456 | opp_overlap 2313158 2313146 2313144, overlap 2313151 2313147 TTAAGCTATAAAAAA GCCCAC TCTC GTGGGC TTTTTTATGCGTATC TERM 2896 2313158 - 2313173 + T 100 -10.4 -5.29782 | opp_overlap 2313151 2313147 2313158, overlap 2313146 2313144 TTAAGCTATAAAAAA GCCCAC TCTC GTGGGC TTTTTTATGCGTATC Shewmr7_1959 2314161 - 2313193 - | PP-loop domain-containing protein TERM 2897 2313366 - 2313388 + g 71 -6.9 -4.18494 | overlap 2313369 CAAACTGCTCACGGT CAACGCCCT GTGAA GGGGCGGTG TTTTGCATGGCGGTG TERM 2898 2314167 - 2314195 + r 71 -8.7 -3.40052 | opp_overlap 2314168, overlap 2314165 2314168 CTTCCAACATAAAAA AGCGCCCAGTAAC TCA GTTTCAGGGCGCG TATTATTCCAGCTAT TERM 2899 2314168 - 2314194 + r 83 -12.2 -2.63549 | opp_overlap 2314168, overlap 2314167 2314165 TTCCAACATAAAAAA GCGCCCAGTAAC TCA GTTTCAGGGCGC GTATTATTCCAGCTA TERM 2900 2314194 - 2314168 - R 100 -12.2 -5.47159 | opp_overlap 2314168 2314167 2314165 TTCCAACATAAAAAA GCGCCCAGTAAC TCA GTTTCAGGGCGC GTATTATTCCAGCTA Shewmr7_1960 2315170 - 2314238 - | universal stress protein UspE TERM 2901 2315141 - 2315151 + g 78 -4 -5.19212 | CGTCGTGGGATCGAC TACT ACC AGTA TTTTTTGATAATCCT TERM 2902 2315183 - 2315219 + r 82 -10.2 -3.72756 | overlap 2315191 CATAACATGTTCCTT TAGTCATAGGCTCATG TTCAT CATGAGCCTTTGGCAA TTATCTGTATTGTTC TERM 2903 2315191 - 2315211 + r 84 -11.2 -3.63305 | overlap 2315183 GTTCCTTTAGTCATA GGCTCATG TTCAT CATGAGCC TTTGGCAATTATCTG Shewmr7_1961 2316065 - 2315313 - | fumarate/nitrate reduction transcriptional regulator TERM 2904 2315766 - 2315734 - G 77 -9.3 -4.08064 | AAGGCCTGGGCAAAA CTTTGATGGGATTGA GCA TGAATGCCATCAAAG CCAATCACATCGCCC Shewmr7_1962 2316813 - 2316121 - | hypothetical protein TERM 2905 2316770 - 2316758 - G 70 -9.1 -3.53745 | opp_overlap 2316758, overlap 2316755 2316754 CACATGCCAAAGCAA TGGGC TGC GCCCA TTAATCCCACCAGAA Shewmr7_1963 2317019 - 2316822 - | cytochrome oxidase maturation protein, cbb3-type Shewmr7_1964 2319450 - 2317039 - | heavy metal translocating P-type ATPase TERM 2906 2318496 - 2318511 + g 70 -10.4 -3.0169 | opp_overlap 2318495 2318496 GCGTCGTGACCAAAT GTGCCG TTAA CGGCAC TAATTTGTGGAGATT Shewmr7_1965 2319940 - 2319461 - | hypothetical protein TERM 2907 2319739 - 2319755 + g 70 -8.7 -3.51904 | overlap 2319737 CGAGTTGCCATTGCA TGCCGAG CTG CTTGGCA TATTTGACTTTACTC TERM 2908 2320030 - 2320010 - R 100 -13.3 -5.78622 | opp_overlap 2320005 GCACTTTAAAAAAAA GGCCTCGAC GTT ATCGAGGCC TTAGCGTTACTCACA Shewmr7_1966 2321019 - 2320051 - | cytochrome c oxidase, cbb3-type, subunit III Shewmr7_1967 2321195 - 2321019 - | Cbb3-type cytochrome oxidase component Shewmr7_1968 2321833 - 2321207 - | cytochrome c oxidase, cbb3-type, subunit II Shewmr7_1969 2323282 - 2321846 - | cytochrome c oxidase, cbb3-type, subunit I TERM 2909 2322373 - 2322351 - G 71 -6.2 -4.30833 | opp_overlap 2322351, overlap 2322355 GAAACCACTAAGAAA CGCAGTACTG GGT CAGTACGGAG TTTATGCCATGCGCC TERM 2910 2323376 - 2323352 - H 71 -4.9 -4.60143 | opp_overlap 2323359, overlap 2323354 ATATATGACACAAAA TCCACTTCCCT ATT AGGGTTGTGAA GCCATGTCAATGCGT Shewmr7_1970 2323506 - 2323991 + | hypothetical protein Shewmr7_1971 2325677 - 2324100 - | response regulator receiver modulated metal dependent phosphohydrolase TERM 2911 2325141 - 2325123 - G 75 -8.8 -3.9392 | CCTGAGTTCAAATAA GCCCGAGG TGG CCTCAAGC ACCCGCTCTAAACCC Shewmr7_1972 2325849 - 2326067 + | hypothetical protein TERM 2912 2326055 - 2326078 + F 84 -9.7 -3.86311 | TGAGTTTTTGGTTAA TGCCGATAA ATAACG TTATCGGCA TTTGCATTTAAGTAT Shewmr7_1973 2326129 - 2327424 + | phage integrase family protein Shewmr7_1974 2328839 - 2327931 - | SMP-30/gluconolaconase/LRE domain-containing protein Shewmr7_1975 2329790 - 2328939 - | hypothetical protein TERM 2913 2329873 - 2329858 - R 100 -10.4 -5.4505 | opp_overlap 2329858 TTTTGCAATAAAAAA GCACCC GAAT GGGTGC TTTCAGTATAGACAG TERM 2914 2329858 - 2329873 + r 82 -10.4 -3.70902 | opp_overlap 2329858 TTTTGCAATAAAAAA GCACCC GAAT GGGTGC TTTCAGTATAGACAG Shewmr7_1976 2333264 - 2329899 - | glycoside hydrolase family protein TERM 2915 2333347 - 2333333 - H 73 -3.6 -5.01811 | opp_overlap 2333342, overlap 2333337 2333339 2333342 GTATCAAATGAAAAA GTAATA CAA TACTAC TGTAACACTAAAGTT Shewmr7_1977 2333852 - 2336662 + | TonB-dependent receptor TERM 2916 2336690 - 2336708 + F 100 -11.8 -5.71295 | opp_overlap 2336690 GTTTAAACCGAAAAA GCTAATCC TAT GGATTAGC TTTTTCTTTTTATAT TERM 2917 2336708 - 2336690 - f 100 -11.8 -4.81249 | opp_overlap 2336690 GTTTAAACCGAAAAA GCTAATCC TAT GGATTAGC TTTTTCTTTTTATAT Shewmr7_1978 2336837 - 2337592 + | hypothetical protein TERM 2918 2337653 - 2337624 - T 100 -11.5 -5.45652 | opp_overlap 2337626, overlap 2337648 AGCCTGAATAAAAAA GAGCAGCAGCTGC ATAC ACAACTACTGCTC TGGTGCCGAGCAAAC TERM 2919 2337905 - 2337936 + T 80 -8.8 -3.9122 | overlap 2337906 ACATCTTCAGGTTGT TTGGGTATTACCAC CGCC GTGGTGATGCTCAG TTATTTAGAGCGATG TERM 2920 2337906 - 2337935 + T 73 -10.1 -2.94411 | overlap 2337905 CATCTTCAGGTTGTT TGGGTATTACCAC CGCC GTGGTGATGCTCA GTTATTTAGAGCGAT Shewmr7_1979 2339858 - 2337954 - | glycoside hydrolase family protein Shewmr7_1980 2340928 - 2339861 - | arabinan endo-1,5-alpha-L-arabinosidase TERM 2921 2340197 - 2340174 - G 72 -9.6 -3.42056 | overlap 2340175 ACGGCTAAGTGATAA GTGCTGTCGT CCCC ACGACAGCAA AGGCCATAGGAGACA TERM 2922 2340196 - 2340175 - G 76 -13.1 -2.64912 | overlap 2340174 CGGCTAAGTGATAAG TGCTGTCGT CCCC ACGACAGCA AAGGCCATAGGAGAC Shewmr7_1981 2341137 - 2342582 + | sugar (glycoside-Pentoside-hexuronide) transporter TERM 2923 2342605 - 2342620 + F 100 -10.4 -5.24129 | opp_overlap 2342599 GCAATAACACCCTAA GCCCCT ACCC AGGGGC TTTTTTATCACGCAA TERM 2924 2344337 - 2344323 - g 70 -4.9 -4.59773 | overlap 2344324 TGTTAGCGGCAAAAA CGGCG CCTAT CGCCA ATGAAGCCTTAAACT Shewmr7_1982 2342690 - 2345077 + | hypothetical protein TERM 2925 2345129 - 2345155 + T 100 -12.4 -4.85599 | opp_overlap 2345132 2345138 AAATACTGATTCAGA TAAGGGAAAGTG AAA CGCTTTCCCTTG TTTTTATCCCCTAAC TERM 2926 2345152 - 2345132 - T 78 -9.7 -3.524 | opp_overlap 2345129, overlap 2345138 TACTGATTCAGATAA GGGAAAGTG AAA CGCTTTCCC TTGTTTTTATCCCCT TERM 2927 2345568 - 2345594 + T 71 -10.1 -2.60956 | gap 1, opp_overlap 2345569, overlap 2345567 AGTCAGGCATAAAAA AGCGGGGC-TGC TGCA GCATGCCCCGCG GTTATCGAATCATTT TERM 2928 2345593 - 2345569 - T 100 -13.6 -5.28176 | gap 1, opp_overlap 2345568 2345567 GTCAGGCATAAAAAA GCGGGGC-TGC TGCA GCATGCCCCGC GGTTATCGAATCATT Shewmr7_1983 2346626 - 2345625 - | Alpha-N-arabinofuranosidase TERM 2929 2346423 - 2346439 + g 86 -11.5 -4.00532 | GGGCGCCCATACGTG GCGGCTC ATC GGGCCGC TTTGGTGTTTAAACC Shewmr7_1984 2347824 - 2346688 - | Alpha-N-arabinofuranosidase TERM 2930 2347135 - 2347164 + gr 74 -10.1 -3.17723 | CCAATCCAATAAGGG CTCGCTGATAATG GTTT CGTTATCAGAGAG TTGAGTTGGCGATAG Shewmr7_1985 2348761 - 2347799 - | inner membrane ABC transporter permease protein YjfF Shewmr7_1986 2349975 - 2348758 - | inner-membrane translocator TERM 2931 2349341 - 2349328 - G 70 -4.5 -4.59773 | overlap 2349329 CGGCAGGCCTAAAAA CTGGC CCAC GCCAA TGGCGGCAAAGCCTG TERM 2932 2349813 - 2349832 + g 100 -5.6 -5.7946 | overlap 2349814 CAATGGAGGTCGACT TGCCCGCT TGGT AACGGGCG TTTTTTTCTTGAACC Shewmr7_1987 2351475 - 2349976 - | ABC transporter related Shewmr7_1988 2352448 - 2351507 - | periplasmic binding protein/LacI transcriptional regulator TERM 2933 2352262 - 2352280 + g 76 -8.2 -4.19817 | TTTGGTTCTCTTGTT TTTGCTGA GCG TCGGCAAA TTTTAAATCGATGCC Shewmr7_1989 2353602 - 2352547 - | aldose 1-epimerase Shewmr7_1990 2354452 - 2353682 - | short-chain dehydrogenase/reductase SDR Shewmr7_1991 2356246 - 2354513 - | dihydroxy-acid dehydratase TERM 2934 2355034 - 2355014 - G 79 -11.1 -3.57561 | GTCGAAGCTTTCAAA CACCACGGC TTT ACCGCGGTG CTGCATCAGGTGTGC TERM 2935 2356397 - 2356377 - H 74 -9.9 -3.11922 | overlap 2356375 2356374 TAGCACGTAAAAGTA TTGGTATTA CTA TAATACCAA AATATCAAAAAACAA Shewmr7_1992 2356423 - 2357370 + | glycoside hydrolase family protein TERM 2936 2357401 - 2357418 + T 100 -9.9 -5.64274 | opp_overlap 2357401 CTCGAAAGTAAAAAA GGTGAAC CTAA GTTCACC TTTTTTTATCGGTAG TERM 2937 2357418 - 2357401 - T 100 -9.9 -5.37593 | opp_overlap 2357401 CTCGAAAGTAAAAAA GGTGAAC CTAA GTTCACC TTTTTTTATCGGTAG Shewmr7_1993 2358174 - 2357458 - | GntR family transcriptional regulator Shewmr7_1994 2359018 - 2358410 - | HAD family hydrolase TERM 2938 2359081 - 2359056 - R 85 -7.5 -4.83169 | opp_overlap 2359061, overlap 2359061 ATGGTTCCAGAAAAA TGAAAGCCGCC CGAA GGCGGCTTTGT TGCTGCGCGAGAATT TERM 2939 2359076 - 2359061 - R 100 -11.8 -4.38116 | opp_overlap 2359061, overlap 2359056 TCCAGAAAAATGAAA GCCGCC CGAA GGCGGC TTTGTTGCTGCGCGA TERM 2940 2359061 - 2359076 + r 100 -11.8 -4.24342 | opp_overlap 2359061 2359056 TCCAGAAAAATGAAA GCCGCC CGAA GGCGGC TTTGTTGCTGCGCGA Shewmr7_1995 2360597 - 2359095 - | L-arabinose isomerase araD 2361331 - 2360636 - | L-ribulose-5-phosphate 4-epimerase Shewmr7_1997 2363006 - 2361333 - | ribulokinase Shewmr7_1998 2363377 - 2363907 + | hypothetical protein TERM 2941 2364037 - 2364057 + T 100 -12.6 -4.73682 | GGTTGACAGTTTTTA GGCCAGCT CCAGT AGCTGGCC TTTTCTATTGTGCAC Shewmr7_1999 2364837 - 2364034 - | integrase catalytic subunit TERM 2942 2364248 - 2364268 + g 71 -11.1 -2.79327 | opp_overlap 2364248, overlap 2364247 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 2943 2364268 - 2364248 - G 79 -11.1 -3.54029 | opp_overlap 2364248 2364247 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 2944 2364839 - 2364865 + r 76 -6.6 -4.43877 | opp_overlap 2364839, overlap 2364839 2364854 CCTTGCCTCGACATA CC-CGCAGCACG ACATG CG-GCTGCGAGG TTTATTTCGCCGTTG TERM 2945 2364854 - 2364881 + r 71 -4 -4.8622 | opp_overlap 2364839, overlap 2364839 2364839 CCCGCAGCACGACAT GCGGCTGCGAGG TTTA TTTCGCCGTTGC TTTTTGCTTGCCAGA Shewmr7_2000 2365262 - 2364867 - | transposase TERM 2946 2365252 - 2365288 + g 77 -10.3 -3.55444 | opp_overlap 2365250 2365254, overlap 2365254 2365255 CGGCTTGAGTTAATT GATGTTGTCATAAAGAG GTC CTCTTTATGTCAACGTA TTTCAGGACTAGACA TERM 2947 2365254 - 2365286 + g 82 -12.9 -3.35597 | opp_overlap 2365250 2365254, overlap 2365252 2365255 GCTTGAGTTAATTGA TGTTGTCATAAAGAG GTC CTCTTTATGTCAACG TATTTCAGGACTAGA TERM 2948 2365255 - 2365285 + g 81 -14.2 -2.61144 | opp_overlap 2365254 2365250, overlap 2365254 2365252 CTTGAGTTAATTGAT GTTGTCATAAAGAG GTC CTCTTTATGTCAAC GTATTTCAGGACTAG TERM 2949 2365318 - 2365338 + r 100 -15.5 -5.00642 | opp_overlap 2365318 ATTGCGAAAGAAAAA GGCCGCTAA TCA TTAGCGGCC TTTTTATCTGAATTG TERM 2950 2365338 - 2365318 - R 100 -15.5 -5.27938 | opp_overlap 2365318 ATTGCGAAAGAAAAA GGCCGCTAA TCA TTAGCGGCC TTTTTATCTGAATTG TERM 2951 2365438 - 2365421 - R 71 -3.4 -4.98672 | overlap 2365431 TCCAAAAACAGAAAA GTCACC ATAACA GATGAC AAATCTGTGGAATAT TERM 2952 2365545 - 2365514 - R 100 -13.2 -4.66833 | opp_overlap 2365521, overlap 2365521 CCGGAACTGCAAAAA CAAAAAAGCCATCA TTGC TGATGGCTTTTCCG TAGAATATGGCGGAG TERM 2953 2365521 - 2365538 + r 88 -9.9 -4.19258 | opp_overlap 2365514 2365521 TGCAAAAACAAAAAA GCCATCA TTGC TGATGGC TTTTCCGTAGAATAT TERM 2954 2365538 - 2365521 - R 100 -9.9 -5.93252 | opp_overlap 2365521, overlap 2365514 TGCAAAAACAAAAAA GCCATCA TTGC TGATGGC TTTTCCGTAGAATAT Shewmr7_2001 2366995 - 2365724 - | inner membrane transport protein YdhC Shewmr7_2002 2367102 - 2368013 + | putative DNA-binding transcriptional regulator TERM 2955 2368487 - 2368477 - g 70 -8.2 -3.65902 | GTTACCCTACGCAAA GCCG ACT CGGC TGCGGGCATCTTCTG Shewmr7_2003 2368273 - 2368932 + | hypothetical protein TERM 2956 2368980 - 2368961 - f 100 -12.2 -4.15854 | opp_overlap 2368961 AAACTTACGCTAAAA TGGCCCTA CTTT TAGGGCCA TTTTTTTTATGATGA TERM 2957 2368961 - 2368980 + F 100 -12.2 -5.9873 | opp_overlap 2368961 AAACTTACGCTAAAA TGGCCCTA CTTT TAGGGCCA TTTTTTTTATGATGA TERM 2958 2369088 - 2369105 + G 76 -4.9 -4.9725 | gap 1, opp_overlap 2369083, overlap 2369083 2369082 TCCCTGCAAAGCGGA CACG-AGA TTG TCTGCGTG TTTTTCTATCAGGAT TERM 2959 2369297 - 2369311 + G 85 -7.2 -4.79352 | CGGACTAAGCCATTG GAATGT TGA ACATTC TTTTATTATGGGTGG Shewmr7_2004 2368989 - 2369381 + | DsrE family protein Shewmr7_2005 2369396 - 2369752 + | DsrE family protein Shewmr7_2006 2369752 - 2370033 + | DsrH family protein Shewmr7_2007 2370027 - 2370365 + | DsrC family protein TERM 2960 2370393 - 2370415 + T 100 -9.3 -5.30616 | opp_overlap 2370393 TCTGCTAACAAAAAA GGTATATTC CAGTT GAATATACC TTTTTATTTGAGTCG TERM 2961 2370415 - 2370393 - T 100 -9.3 -5.4505 | opp_overlap 2370393 TCTGCTAACAAAAAA GGTATATTC CAGTT GAATATACC TTTTTATTTGAGTCG Shewmr7_2008 2370555 - 2370433 - | hypothetical protein Shewmr7_2009 2371860 - 2370574 - | seryl-tRNA synthetase Shewmr7_2010 2372253 - 2371879 - | camphor resistance protein CrcB Shewmr7_2011 2373577 - 2372246 - | recombination factor protein RarA TERM 2962 2372507 - 2372527 + g 70 -9 -3.54129 | gap 1, opp_overlap 2372484 CTCTTGGCCCGTTTC GCGGGCGAG CGCC CTCGCC-GC TTTAAAAGCGGTGTA Shewmr7_2012 2374206 - 2373586 - | outer membrane lipoprotein carrier protein LolA TERM 2963 2374089 - 2374111 + g 77 -9.8 -3.71917 | opp_overlap 2374089 2374088 CGGTTTGCTTGAAAT CGGCCTTGAG TGA CTCAGTGCCG TTTAAGGTTTCGCGT TERM 2964 2374257 - 2374227 - R 93 -9.8 -4.25104 | overlap 2374228 TCCTTTGGACTAAAA GTTGAACTCGCC GCATTAT GGCGAGTTCAAA CTGACATCTAGCTTA TERM 2965 2374256 - 2374228 - R 100 -13.3 -3.14848 | overlap 2374227 CCTTTGGACTAAAAG TTGAACTCGCC GCATTAT GGCGAGTTCAA ACTGACATCTAGCTT Shewmr7_2013 2377017 - 2374276 - | DNA translocase FtsK TERM 2966 2376303 - 2376318 + g 86 -8.2 -4.60487 | TCGGTGCGACCTCAG GCTCGC GCAC GCGGGC TTTTTCAAGCTGATG TERM 2967 2377257 - 2377226 - R 86 -6.6 -4.98522 | overlap 2377228 AATGCGAGATAAAAA TATGCCCCTAAGCT GGCA AACCTAAGGGCAAA GCAAGGTGATGATTG TERM 2968 2377255 - 2377228 - R 85 -9.2 -4.11141 | overlap 2377226 TGCGAGATAAAAATA TGCCCCTAAGCT GGCA AACCTAAGGGCA AAGCAAGGTGATGAT TERM 2969 2377320 - 2377301 - R 100 -12.2 -4.19678 | opp_overlap 2377304, overlap 2377304 TTACACTGGAATAAA TAAGGGGC CTAA GCCCCTTA TTGAAAACGTTCAGG TERM 2970 2377304 - 2377317 + r 78 -9.5 -3.62522 | opp_overlap 2377304 2377301 CACTGGAATAAATAA GGGGC CTAA GCCCC TTATTGAAAACGTTC TERM 2971 2377317 - 2377304 - R 85 -9.5 -4.21438 | opp_overlap 2377304, overlap 2377301 CACTGGAATAAATAA GGGGC CTAA GCCCC TTATTGAAAACGTTC Shewmr7_2014 2377845 - 2377339 - | leucine-responsive transcriptional regulator TERM 2972 2377986 - 2378000 + H 77 -6.4 -4.58283 | AAAATAACAATTATG CCCATT AAA AGTGGG TTTTTCAGGCAATTG TERM 2973 2378072 - 2378058 - g 76 -4.2 -5.05577 | opp_overlap 2378065, overlap 2378059 AAAGGAAATTAAAAA CCACGA GTA TCGTGT CGGTATGGTTCCTTC Shewmr7_2015 2378026 - 2379141 + | L-alanine dehydrogenase TERM 2974 2379183 - 2379206 + T 100 -12.5 -5.32882 | CCTACTCTACTTTGT TCGGCCTCA CTCTGT TGAGGCCGA TTTTTTATGCTGATC Shewmr7_2016 2379374 - 2379189 - | hypothetical protein TERM 2975 2379781 - 2379765 - g 70 -10.9 -2.90349 | overlap 2379764 CGCGCAAACTTAAAG CCTGTGA TGA TCACAGG TATGCAACAAGGTGG Shewmr7_2017 2379672 - 2380625 + | thioredoxin reductase TERM 2976 2380710 - 2380654 - T 100 -15.6 -3.16564 | gap 1, opp_overlap 2380672, overlap 2380642 2380658 2380672 TAATCGAATCTAAGA CTAAGATTCAAAT-AAAAATAGCAGGC ATTA GCCTGCTATTTTTTATCTGTATCTTGG ACTCGCTTGAAGCAA TERM 2977 2380706 - 2380658 - T 100 -15 -3.39529 | gap 1, opp_overlap 2380672, overlap 2380642 2380654 2380672 CGAATCTAAGACTAA GATTCAAAT-AAAAATAGCAGGC ATTA GCCTGCTATTTTTTATCTGTATC TTGGACTCGCTTGAA TERM 2978 2380691 - 2380672 - T 100 -12.2 -5.31519 | opp_overlap 2380672, overlap 2380658 2380654 AGATTCAAATAAAAA TAGCAGGC ATTA GCCTGCTA TTTTTTATCTGTATC TERM 2979 2380672 - 2380691 + T 100 -12.2 -5.4492 | opp_overlap 2380672 2380658 2380654 AGATTCAAATAAAAA TAGCAGGC ATTA GCCTGCTA TTTTTTATCTGTATC TERM 2980 2380784 - 2380769 - T 100 -10.4 -5.84381 | opp_overlap 2380768 GCAGCAACAAAAAAA GGGACC AAAT GGTCCC CTCTTAAGTGCGACA TERM 2981 2380794 - 2380821 + T 73 -5.6 -4.47007 | opp_overlap 2380802 GGTCCCCTCTTAAGT GCGACAAACTAA TTGC TTAGTTTAACGC TTCTTTTGCTTTTTC rplT 2381166 - 2380810 - | 50S ribosomal protein L20 rpmI 2381377 - 2381183 - | 50S ribosomal protein L35 TERM 2982 2381419 - 2381444 + r 86 -9.8 -3.97636 | gap 1, opp_overlap 2381417 2381416 2381413, overlap 2381421 AATAAAAAGCAAGGC G-AGCGAAGGC ATATA GCCTTCGCTAC TTTATAGGTTGCCCT TERM 2983 2381421 - 2381441 + r 93 -12.6 -3.04203 | opp_overlap 2381417 2381416 2381413, overlap 2381419 TAAAAAGCAAGGCGA GCGAAGGC ATATA GCCTTCGC TACTTTATAGGTTGC Shewmr7_2020 2381893 - 2381462 - | translation initiation factor 3 Shewmr7_2021 2383936 - 2382008 - | threonyl-tRNA synthetase Shewmr7_2022 2384188 - 2384571 + | hypothetical protein Shewmr7_2023 2384790 - 2384990 + | hypothetical protein Shewmr7_2024 2385620 - 2385000 - | riboflavin synthase subunit alpha TERM 2984 2385850 - 2385863 + G 72 -8.1 -3.92542 | overlap 2385847 TCCAAGGGCTGCTGA TGGCG TTTA CGCCA TTATTTGCCCATCAC TERM 2985 2386894 - 2386909 + G 86 -9 -4.57341 | ATTTTATCGTCCCCG CCATGG GCGC CCATGG TTTTTGGACCGGGTT TERM 2986 2386945 - 2386955 + G 70 -4.6 -4.73388 | overlap 2386942 2386929 CAGGCCTCACCTCGG CGGC GCT GCTG TTTTTCATCCGCCTT Shewmr7_2025 2385654 - 2387033 + | MATE efflux family protein TERM 2987 2387079 - 2387045 - T 100 -15.9 -4.17417 | opp_overlap 2387047 2387052, overlap 2387047 2387052 CTAAGCAGACAGAAA GATAAAACGGCGAGC TAAAT GCTCGCCGTTTTATT CCGTGCGGGGGGATT TERM 2988 2387047 - 2387077 + T 100 -18.5 -3.05384 | opp_overlap 2387045 2387047 2387052, overlap 2387052 AAGCAGACAGAAAGA TAAAACGGCGAGC TAAAT GCTCGCCGTTTTA TTCCGTGCGGGGGGA TERM 2989 2387077 - 2387047 - T 100 -18.5 -3.6767 | opp_overlap 2387047 2387052, overlap 2387045 2387052 AAGCAGACAGAAAGA TAAAACGGCGAGC TAAAT GCTCGCCGTTTTA TTCCGTGCGGGGGGA TERM 2990 2387052 - 2387072 + T 100 -14 -4.67982 | opp_overlap 2387047 2387045 2387052, overlap 2387047 GACAGAAAGATAAAA CGGCGAGC TAAAT GCTCGCCG TTTTATTCCGTGCGG TERM 2991 2387072 - 2387052 - T 100 -14 -4.87328 | opp_overlap 2387052 2387047, overlap 2387047 2387045 GACAGAAAGATAAAA CGGCGAGC TAAAT GCTCGCCG TTTTATTCCGTGCGG Shewmr7_2026 2388475 - 2387630 - | hypothetical protein TERM 2992 2389298 - 2389275 - R 100 -10.4 -5.19212 | opp_overlap 2389275 ATGAGGACCAAAAAA TGCCTTATCT TAAT AGACAAGGCA TTGCTGTAATTAACT TERM 2993 2389342 - 2389322 - R 73 -7.1 -4.11751 | opp_overlap 2389314 2389324 ATTAACTTTCTAAAA TATTATTAT TCA ATAATAATA GCTTAGGGTTAACTC Shewmr7_2028 2390390 - 2389389 - | hypothetical protein TERM 2994 2390647 - 2390637 - H 71 -6.8 -4.11484 | opp_overlap 2390636 2390637 CGCAATTTCCTAAAA CGCA AAC TGCG CATTTTTGCTTTTGG TERM 2995 2390871 - 2390885 + H 70 -7.2 -3.76224 | opp_overlap 2390870 TCATAAATATCAAGT TGAATC AGT GATTCA TTTAATCGATGAGGA Shewmr7_2029 2391121 - 2391672 + | ecotin precursor TERM 2996 2391748 - 2391725 - T 100 -14 -4.03234 | opp_overlap 2391725 CTGCGGTTATATAAA GGGCATATCT CACA AGATATGCCC TTTTTTATCAGCAAG TERM 2997 2391725 - 2391748 + T 100 -14 -5.24129 | opp_overlap 2391725 CTGCGGTTATATAAA GGGCATATCT CACA AGATATGCCC TTTTTTATCAGCAAG Shewmr7_2030 2393753 - 2391756 - | ATP-dependent DNA helicase RecQ Shewmr7_2031 2394136 - 2393813 - | hypothetical protein Shewmr7_2032 2394793 - 2394293 - | hypothetical protein TERM 2998 2394870 - 2394880 + H 70 -5.4 -4.48823 | opp_overlap 2394870 2394867 CACAGATTAAAAGAA TGGT TAC ACCA TTTTATAAGTTCATT TERM 2999 2395067 - 2395057 - H 73 -5.4 -4.614 | opp_overlap 2395057 2395055 TTTAACCACATAAAA TGGT TTA ACCA TCTTTTAAAAGTAAA TERM 3000 2395359 - 2395317 - H 72 -6.5 -4.32763 | gap 1, overlap 2395319 2395322 TTAAAATACAAATAA CAGCA-CTACCAGTGATAAT GACG ATTATCACTGGTAGATAAAG GCTGGTTTTACGTAT TERM 3001 2395357 - 2395319 - H 70 -7.7 -3.73788 | gap 1, overlap 2395317 2395322 AAAATACAAATAACA GCA-CTACCAGTGATAAT GACG ATTATCACTGGTAGATAA AGGCTGGTTTTACGT TERM 3002 2395353 - 2395322 - H 100 -17.6 -2.93099 | overlap 2395319 2395317 ATACAAATAACAGCA CTACCAGTGATAAT GACG ATTATCACTGGTAG ATAAAGGCTGGTTTT TERM 3003 2395734 - 2395722 - g 73 -6.3 -4.47707 | GGTCATCAAAAAGAA TTGCT CCA AGCAA GCAGTGGGACTCAGC Shewmr7_2033 2395410 - 2396519 + | phage integrase family protein TERM 3004 2397068 - 2397048 - g 72 -8.3 -3.84648 | GGGAACACCATTAAA TTCTAAGGC CGC GCCTTGGAA AGCCGATGGCAGCAA Shewmr7_2034 2396716 - 2398773 + | twin-arginine translocation pathway signal TERM 3005 2398818 - 2398802 - T 100 -13.7 -4.89393 | opp_overlap 2398802 GAAACCCGATAAAAA TCCCCGC CAT GCGGGGA TTTTTTTATTCACTG TERM 3006 2398802 - 2398818 + T 100 -13.7 -5.8187 | opp_overlap 2398802 GAAACCCGATAAAAA TCCCCGC CAT GCGGGGA TTTTTTTATTCACTG Shewmr7_2035 2400284 - 2398824 - | RND efflux system outer membrane lipoprotein Shewmr7_2036 2403480 - 2400313 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 3007 2402335 - 2402323 - G 79 -9.1 -4.21408 | AATGGTAAAACCAAA GGCCA GCA TGGCC GCCAAGGTGCCTATC Shewmr7_2037 2404736 - 2403480 - | RND family efflux transporter MFP subunit Shewmr7_2038 2405761 - 2404997 - | DTW domain-containing protein ampC 2406191 - 2407444 + | beta-lactamase TERM 3008 2408051 - 2408074 + G 79 -5.2 -4.91109 | opp_overlap 2408051, overlap 2408053 GAGTTGGGCGTAAAA TTCCGCTGCT CATT GGCATCGGGA TTTTTATCGTCGGCG emrD 2407783 - 2409027 + | multidrug resistance protein D TERM 3009 2409031 - 2409021 - T 70 -5.4 -4.46212 | TCTGTTACCACAAAA CTCA TAG TGAG CATATAGCCAATAAT TERM 3010 2409075 - 2409046 - T 100 -16.7 -3.72231 | opp_overlap 2409046 2409051, overlap 2409051 GCATATAGCCAATAA TAAAATAGCCCAC AGAT GTGGGCTATTTTA TTGTTCCGATTTAGA TERM 3011 2409046 - 2409075 + T 100 -16.7 -3.70919 | opp_overlap 2409046 2409051, overlap 2409051 GCATATAGCCAATAA TAAAATAGCCCAC AGAT GTGGGCTATTTTA TTGTTCCGATTTAGA TERM 3012 2409070 - 2409051 - T 100 -12.2 -4.91084 | opp_overlap 2409051 2409046, overlap 2409046 TAGCCAATAATAAAA TAGCCCAC AGAT GTGGGCTA TTTTATTGTTCCGAT TERM 3013 2409051 - 2409070 + T 100 -12.2 -4.90079 | opp_overlap 2409046 2409051, overlap 2409046 TAGCCAATAATAAAA TAGCCCAC AGAT GTGGGCTA TTTTATTGTTCCGAT pssA 2410404 - 2409091 - | phosphatidylserine synthase Shewmr7_2042 2410748 - 2410416 - | hypothetical protein Shewmr7_2043 2411130 - 2411306 + | hypothetical protein TERM 3014 2412218 - 2412200 - g 75 -10.4 -3.38314 | overlap 2412198 CTCAAGGGGGAAATA TCACTTTC GGG GAAAGTGA AAATAGGCAATACCA Shewmr7_2044 2411333 - 2412874 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Shewmr7_2045 2413680 - 2412871 - | integrase catalytic subunit TERM 3015 2413111 - 2413091 - G 79 -11.1 -3.54029 | opp_overlap 2413090 2413091 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 3016 2413091 - 2413111 + g 71 -11.1 -2.79327 | opp_overlap 2413091, overlap 2413090 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 3017 2413386 - 2413436 + g 70 -2.6 -4.99638 | gap 1, opp_overlap 2413403 CATCATGCAGTCCTT CCTCTTTCAGCAGAT-TAGGATG CTTCTT CATCCAGTGTTTGCTGAACGTGG TTTTTGTGTAGCTCT TERM 3018 2413699 - 2413725 + r 70 -5.8 -4.4078 | CGCAGCACGACATGC GGCAGCGAAG TTTATTT CTCCGTTGCC TTTTGCTTGCCAGAC Shewmr7_2046 2414105 - 2413710 - | transposase TERM 3019 2414184 - 2414156 - R 100 -11.9 -4.34345 | opp_overlap 2414162, overlap 2414162 TAGACACCATTAAAA GAAAAAGCACTGA ATA TCAGTGCTTTTTT ATTAGGTAAATTCGA TERM 3020 2414162 - 2414178 + r 100 -10.9 -5.4833 | opp_overlap 2414156 2414162 CCATTAAAAGAAAAA GCACTGA ATA TCAGTGC TTTTTTATTAGGTAA TERM 3021 2414178 - 2414162 - R 100 -10.9 -5.50723 | opp_overlap 2414162, overlap 2414156 CCATTAAAAGAAAAA GCACTGA ATA TCAGTGC TTTTTTATTAGGTAA Shewmr7_2047 2415981 - 2414224 - | acyl-CoA dehydrogenase domain-containing protein TERM 3022 2416108 - 2416127 + r 100 -10.8 -4.34402 | opp_overlap 2416108 ACGGGCAATAAAAAA CCCTTAAG TTGC CTTAAGGG TTTTAGTGTAGCCAG TERM 3023 2416127 - 2416108 - R 100 -10.8 -5.45652 | opp_overlap 2416108 ACGGGCAATAAAAAA CCCTTAAG TTGC CTTAAGGG TTTTAGTGTAGCCAG Shewmr7_2048 2416730 - 2416188 - | hypothetical protein Shewmr7_2049 2417616 - 2416789 - | short chain dehydrogenase TERM 3024 2417253 - 2417243 - G 71 -6.8 -4.15565 | TTTAGCACTTGAAAA CTGC CCA GCAG ATCAATATCCATCAC Shewmr7_2050 2418384 - 2417689 - | orotidine-5'-phosphate decarboxylase Shewmr7_2051 2419587 - 2418427 - | hypothetical protein TERM 3025 2418984 - 2418994 + g 70 -3.2 -4.77173 | overlap 2418982 CTTGTTTTAATGCCT GTTG CAG CAGC TTTATTTTGTCCGCA TERM 3026 2419614 - 2419633 + r 81 -7.2 -4.59342 | ACACCTTGAGGAGTT TTAGCGGT TTGG ACCGTTAA TTTCTTTCTGGTCGC Shewmr7_2052 2419864 - 2419589 - | hypothetical protein TERM 3027 2419969 - 2419954 - R 100 -8.2 -5.43414 | opp_overlap 2419954, overlap 2419947 ATTAGATATAAAAAA GCCCCC TTAC GGAGGC TTTTTGTAATGCGGT TERM 3028 2419954 - 2419969 + r 82 -6 -4.91511 | opp_overlap 2419954 2419947 ATTAGATATAAAAAA GCCCCC TTAC GGAGGC TTTTTGTAATGCGGT Shewmr7_2053 2420275 - 2419988 - | integration host factor, beta subunit TERM 3029 2420335 - 2420317 - R 77 -10.3 -3.09759 | overlap 2420309 AACACAGTCACCTAA TGGGGAG AAAAA CTCCCCA TACAACAGGCGATTA rpsA 2422015 - 2420348 - | 30S ribosomal protein S1 Shewmr7_2055 2422809 - 2422117 - | cytidylate kinase TERM 3030 2422730 - 2422748 + g 75 -10.4 -3.47349 | opp_overlap 2422725 TGCCATCCAAGATGC TTAGCCAA TAA TTGGCTAA TTGTCCCTTTACCAG Shewmr7_2056 2424272 - 2422992 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 3031 2424443 - 2424464 + H 73 -5.9 -4.56597 | opp_overlap 2424444 2424461, overlap 2424444 GTGACGCAGGATTCA ACCGTTTTT TACT AAAAACGGC TTTTTAAACCGGAAA TERM 3032 2424463 - 2424444 - H 72 -9.4 -3.10164 | opp_overlap 2424443 2424444, overlap 2424461 TGACGCAGGATTCAA CCGTTTTT TACT AAAAACGG CTTTTTAAACCGGAA TERM 3033 2424444 - 2424463 + H 74 -9.4 -3.33744 | opp_overlap 2424444 2424461, overlap 2424443 TGACGCAGGATTCAA CCGTTTTT TACT AAAAACGG CTTTTTAAACCGGAA TERM 3034 2424475 - 2424461 - H 77 -6.4 -4.72272 | opp_overlap 2424444 2424443, overlap 2424444 GTTTTTTACTAAAAA CGGCTT TTT AAACCG GAAAATTACTCAAGT TERM 3035 2424525 - 2424511 - H 80 -2.8 -5.51353 | TAAAAATAACAAAAA CACAAA ATA TCTGCG GTTAAATTGTGACCT Shewmr7_2057 2424706 - 2425896 + | aromatic amino acid aminotransferase TERM 3036 2426063 - 2426046 - T 100 -9.9 -5.5604 | opp_overlap 2426046 GCAACCAATAAAAAA CGAATGC CTAG GCATTCG TTTTTTTCTCACTTT TERM 3037 2426046 - 2426063 + T 100 -9.9 -5.68039 | opp_overlap 2426046 GCAACCAATAAAAAA CGAATGC CTAG GCATTCG TTTTTTTCTCACTTT Shewmr7_2058 2427245 - 2426154 - | phosphoserine aminotransferase TERM 3038 2427334 - 2427313 - R 100 -15.9 -5.52384 | opp_overlap 2427313 TTGCCATGAAAAAAA CGAGCGTCC AATT GGACGCTCG TTTTCATACTCTCGA TERM 3039 2427313 - 2427334 + r 100 -15.9 -4.33274 | opp_overlap 2427313 TTGCCATGAAAAAAA CGAGCGTCC AATT GGACGCTCG TTTTCATACTCTCGA Shewmr7_2059 2430185 - 2427351 - | DNA gyrase subunit A TERM 3040 2427951 - 2427977 + g 73 -9.4 -3.71353 | overlap 2427972 TTCATCCAGCACTGG GTTGCCGTTTTC ATC GAGTACGGCGAC TTCTTCGCCTTCTTT TERM 3041 2428981 - 2428994 + g 74 -9.5 -3.57561 | opp_overlap 2428979 GCCTCAAGAATATGG GCGCG TTCT CGCGC TTTACGCAGTTCGAA Shewmr7_2060 2430493 - 2431203 + | 3-demethylubiquinone-9 3-methyltransferase Shewmr7_2061 2431205 - 2431879 + | HAD family hydrolase TERM 3042 2432054 - 2432041 - f 75 -2.3 -5.40474 | ATTTGCGCAAAAAAA CGTCA TCAA TGCCG CACGCTAATCTCAAT TERM 3043 2432080 - 2432099 + F 77 -5 -5.02323 | overlap 2432082 TCAATTTGAGCTTCA GGGTTAGT CATC ACTAACGC TTTTCTTTATCCTCA TERM 3044 2433543 - 2433565 + G 70 -10 -3.21099 | opp_overlap 2433542 2433540 2433543 2433549, overlap 2433549 TTCGTAAGAAGACAT TGAAAGCAGT CGA ACTGTTTTCA TTAATGATGCAAGAG TERM 3045 2433549 - 2433559 + G 71 -5.4 -4.46615 | opp_overlap 2433543 2433542 2433540 2433549, overlap 2433543 AGAAGACATTGAAAG CAGT CGA ACTG TTTTCATTAATGATG TERM 3046 2433943 - 2433922 - g 77 -11.7 -3.14344 | TATTGGTGTTATCAA CTTCGCTAA CTAC TTAGCGAAG AATGGCATGAAGTAC TERM 3047 2434274 - 2434284 + G 70 -8.2 -3.78022 | opp_overlap 2434274 2434264 ACTAACGGTATCGAA CCGC CAC GCGG TTTGATCAGTGTCAA Shewmr7_2062 2432366 - 2434654 + | ribonucleotide-diphosphate reductase subunit alpha TERM 3048 2434672 - 2434696 + F 80 -9.9 -3.66018 | overlap 2434673 TTTAATGTTAACGGT TACGGGATCCC TTT GGGATCCCGAC TTATTGGAATACTCG TERM 3049 2434673 - 2434695 + F 93 -13.4 -2.79289 | overlap 2434672 TTAATGTTAACGGTT ACGGGATCCC TTT GGGATCCCGA CTTATTGGAATACTC nrdB 2434716 - 2435846 + | ribonucleotide-diphosphate reductase subunit beta Shewmr7_2064 2435863 - 2436273 + | ferredoxin Shewmr7_2065 2436457 - 2436927 + | hypothetical protein TERM 3050 2437004 - 2437024 + T 91 -8.2 -4.73682 | GGTTGACAGTTTTTA GGCCAGCT CCAGT AGCAGGCC TTTTCTATTGTGCAC Shewmr7_2066 2437804 - 2437001 - | integrase catalytic subunit TERM 3051 2437235 - 2437215 - G 79 -11.1 -3.54029 | opp_overlap 2437215 2437214 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 3052 2437215 - 2437235 + g 71 -11.1 -2.79327 | opp_overlap 2437215, overlap 2437214 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 3053 2437806 - 2437832 + r 76 -6.6 -4.43877 | opp_overlap 2437806, overlap 2437806 2437821 CCTTGCCTCGACATA CC-CGCAGCACG ACATG CG-GCTGCGAGG TTTATTTCGCCGTTG TERM 3054 2437821 - 2437848 + r 71 -4 -4.8622 | opp_overlap 2437806, overlap 2437806 2437806 CCCGCAGCACGACAT GCGGCTGCGAGG TTTA TTTCGCCGTTGC TTTTTGCTTGCCAGA Shewmr7_2067 2438229 - 2437834 - | transposase TERM 3055 2438219 - 2438255 + g 77 -10.3 -3.55444 | opp_overlap 2438217 2438221, overlap 2438221 2438222 CGGCTTGAGTTAATT GATGTTGTCATAAAGAG GTC CTCTTTATGTCAACGTA TTTCAGGACTAGACA TERM 3056 2438221 - 2438253 + g 82 -12.9 -3.35597 | opp_overlap 2438217 2438221, overlap 2438219 2438222 GCTTGAGTTAATTGA TGTTGTCATAAAGAG GTC CTCTTTATGTCAACG TATTTCAGGACTAGA TERM 3057 2438222 - 2438252 + g 81 -14.2 -2.61144 | opp_overlap 2438221 2438217, overlap 2438221 2438219 CTTGAGTTAATTGAT GTTGTCATAAAGAG GTC CTCTTTATGTCAAC GTATTTCAGGACTAG TERM 3058 2438313 - 2438275 - R 100 -16.2 -2.77088 | opp_overlap 2438285, overlap 2438285 AGGACTAGACACAAT CAACAAAAAAGCCTGAGT CAG ACTCAGGCTTTTTTGGGG TAAACCGCTTAAAAA TERM 3059 2438303 - 2438285 - R 100 -13.2 -5.57396 | opp_overlap 2438285, overlap 2438275 ACAATCAACAAAAAA GCCTGAGT CAG ACTCAGGC TTTTTTGGGGTAAAC TERM 3060 2438285 - 2438303 + r 100 -13.2 -5.0538 | opp_overlap 2438275 2438285 ACAATCAACAAAAAA GCCTGAGT CAG ACTCAGGC TTTTTTGGGGTAAAC Shewmr7_2068 2440347 - 2438329 - | 2,4-dienoyl-CoA reductase TERM 3061 2441752 - 2441765 + G 70 -8.1 -3.68024 | overlap 2441729 GGCGGTTATTGGATT TCGGC CAGC GCCGA TTATATCTTCGCAAC Shewmr7_2069 2440513 - 2442357 + | signal peptide peptidase SppA, 67K type TERM 3062 2442405 - 2442380 - f 78 -10.5 -3.34589 | opp_overlap 2442385, overlap 2442385 TCAAGATGAAAGACA CAAAAGCCCGA ACCC TCGGGCTTTTT TATTGGGTTTATGCC TERM 3063 2442400 - 2442385 - f 100 -10.4 -4.74917 | opp_overlap 2442385, overlap 2442380 ATGAAAGACACAAAA GCCCGA ACCC TCGGGC TTTTTTATTGGGTTT TERM 3064 2442385 - 2442400 + F 100 -10.4 -5.52096 | opp_overlap 2442380 2442385 ATGAAAGACACAAAA GCCCGA ACCC TCGGGC TTTTTTATTGGGTTT TERM 3065 2442543 - 2442553 + G 70 -2.4 -5.0133 | GCGAATGGTTTTGCT CCGG TGG CAGG TTTTTTGACCCAATG ansA 2442468 - 2443481 + | cytoplasmic asparaginase I TERM 3066 2443501 - 2443528 + T 100 -11.4 -3.92542 | opp_overlap 2443507, overlap 2443507 CGAAACGCTGCGCAT GAAAAAGCCCAC ATTA GTGGGCTTTTTG TTGTTTAAGCATCAA TERM 3067 2443507 - 2443522 + T 100 -10.4 -5.38549 | opp_overlap 2443507, overlap 2443501 GCTGCGCATGAAAAA GCCCAC ATTA GTGGGC TTTTTGTTGTTTAAG TERM 3068 2443522 - 2443507 - T 100 -10.4 -4.72272 | opp_overlap 2443507 2443501 GCTGCGCATGAAAAA GCCCAC ATTA GTGGGC TTTTTGTTGTTTAAG Shewmr7_2071 2443834 - 2443553 - | hypothetical protein Shewmr7_2072 2444148 - 2443831 - | hypothetical protein Shewmr7_2073 2445284 - 2444157 - | peptidase M14, carboxypeptidase A TERM 3069 2445376 - 2445361 - R 72 -6.2 -4.30719 | GCCCGTTAGAATAAA CCAAAT CCGT ATTTGG GGAAAATGAAAGCGA Shewmr7_2074 2446145 - 2445465 - | two component transcriptional regulator TERM 3070 2446321 - 2446295 - R 100 -10.3 -4.25104 | gap 1, opp_overlap 2446302, overlap 2446302 CCTTTTGCACCAAAA CAAAAAAGCGCC CGAA GGCGC-TTTTTG AGGGTTGGTTCTATC TERM 3071 2446302 - 2446315 + r 100 -9.5 -4.62872 | opp_overlap 2446302 2446295 CACCAAAACAAAAAA GCGCC CGAA GGCGC TTTTTGAGGGTTGGT TERM 3072 2446315 - 2446302 - R 100 -9.5 -5.83211 | opp_overlap 2446302, overlap 2446295 CACCAAAACAAAAAA GCGCC CGAA GGCGC TTTTTGAGGGTTGGT Shewmr7_2075 2448909 - 2446342 - | TonB-dependent receptor TERM 3073 2449225 - 2449210 - R 86 -7.6 -4.58283 | opp_overlap 2449209 2449210 GAATTCCCTTAAAAA TGTGAC ACAC GTCACA CTTTATCAAGTGAGA TERM 3074 2449845 - 2449820 - R 100 -16.3 -4.66264 | opp_overlap 2449826, overlap 2449826 TAAAATCGGTAAAAA CAAAAAGCGGC CAAG GCCGCTTTTTG TTAACAAGGTCATCC TERM 3075 2449839 - 2449826 - R 100 -9.5 -5.61881 | opp_overlap 2449826, overlap 2449820 CGGTAAAAACAAAAA GCGGC CAAG GCCGC TTTTTGTTAACAAGG TERM 3076 2449826 - 2449839 + r 100 -9.5 -5.06414 | opp_overlap 2449826 2449820 CGGTAAAAACAAAAA GCGGC CAAG GCCGC TTTTTGTTAACAAGG ruvB 2450875 - 2449871 - | Holliday junction DNA helicase B TERM 3077 2450965 - 2450953 - R 70 -5.5 -4.57341 | AACTGGCTGCAAAAA TCGCG TAC CGCAA TATAACACTAGCCTC Shewmr7_2077 2451614 - 2450997 - | Holliday junction DNA helicase RuvA TERM 3078 2451368 - 2451384 + g 79 -12.3 -3.19463 | opp_overlap 2451351 TTAACGCCAGTTTAG GGCCAAC GCC GTTGGCC TTGATGAGTAATCGA Shewmr7_2078 2452132 - 2451611 - | crossover junction endodeoxyribonuclease RuvC TERM 3079 2452349 - 2452324 - R 93 -12.7 -3.08312 | opp_overlap 2452331, overlap 2452327 AACTGATCTATGTAA GAACTAAGCTC TGGC GAGCTCAGTTC CGGCCACCTACTCAG TERM 3080 2452346 - 2452327 - R 73 -8.6 -3.68569 | opp_overlap 2452331, overlap 2452324 TGATCTATGTAAGAA CTAAGCTC TGGC GAGCTCAG TTCCGGCCACCTACT Shewmr7_2079 2453136 - 2452390 - | hypothetical protein TERM 3081 2453199 - 2453216 + r 100 -9.1 -4.71776 | AAGGTAACGTTGGCG GCGCCTC TAAT GAGGTGC TTTTATTCAATGTTC TERM 3082 2453337 - 2453311 - R 81 -7.3 -4.58663 | gap 1, overlap 2453313 2453315 ATGACGGGGTAAAAA TAG-ACCGAGGC TTGC GCCTCGGTACTC GATAATCACTAAGAA TERM 3083 2453334 - 2453313 - R 84 -10.1 -3.90762 | overlap 2453311 2453315 GACGGGGTAAAAATA GACCGAGGC TTGC GCCTCGGTA CTCGATAATCACTAA TERM 3084 2453332 - 2453315 - R 100 -12.7 -3.53855 | overlap 2453313 2453311 CGGGGTAAAAATAGA CCGAGGC TTGC GCCTCGG TACTCGATAATCACT aspS 2455128 - 2453353 - | aspartyl-tRNA synthetase TERM 3085 2455212 - 2455187 - R 77 -6.2 -4.6709 | overlap 2455188 CAAAACGAGATAAAA GCGGCATTAT AGTCAA ATAATGCCGA TTACCAAAGTACTTC TERM 3086 2455211 - 2455188 - R 76 -9.7 -3.38627 | overlap 2455187 AAAACGAGATAAAAG CGGCATTAT AGTCAA ATAATGCCG ATTACCAAAGTACTT TERM 3087 2455329 - 2455344 + r 100 -10.4 -4.30014 | opp_overlap 2455321 2455318, overlap 2455321 CAAGCCACGCGGTAG CAGCGG CCAC CCGCTG TTTTGGCTTGGTACA Shewmr7_2081 2458126 - 2455313 - | diguanylate cyclase TERM 3088 2457302 - 2457292 - G 74 -8.2 -4.0827 | ATAGATCCACATAAA GCCC ATG GGGC AAACCGTCAACGCCG TERM 3089 2458029 - 2458002 - G 73 -11.4 -2.91276 | overlap 2458001 TCGTTGTCGACAAAC TGATAGGGAAAG CTGT CTTCCCCCATCA CCACAATCAGTGACT Shewmr7_2082 2458275 - 2459006 + | putative methyltransferase Shewmr7_2083 2459003 - 2459995 + | putative methyltransferase Shewmr7_2084 2460079 - 2460903 + | hypothetical protein Shewmr7_2085 2461117 - 2462625 + | gonadoliberin III-related protein TERM 3090 2463481 - 2463471 - gf 74 -6.8 -4.35926 | ATTGCAAATGGAAAA GGCA TTT TGCC TAGACTTAAGCATGT Shewmr7_2086 2462625 - 2463569 + | alpha-L-glutamate ligase-like protein TERM 3091 2463595 - 2463620 + GF 76 -11.1 -2.63102 | overlap 2463610 TGGTGTTTATCCTCC CTCGGTGCAGC CTAT GCTGCGCCAAG TCCTGTGCCGCTGCT Shewmr7_2087 2463544 - 2465451 + | hypothetical protein TERM 3092 2466297 - 2466318 + GF 71 -5.1 -4.46212 | opp_overlap 2466297 2466300, overlap 2466301 ATGCGACCGACGATA TTATTGCCG AAGT CGGCATTAG TTTTCTGCTAGCGGG TERM 3093 2466301 - 2466314 + GF 72 -8.1 -3.77302 | opp_overlap 2466300 2466297, overlap 2466297 GACCGACGATATTAT TGCCG AAGT CGGCA TTAGTTTTCTGCTAG Shewmr7_2088 2465378 - 2466577 + | hypothetical protein TERM 3094 2466603 - 2466642 + F 70 -5.6 -4.27316 | opp_overlap 2466604, overlap 2466604 TAGTTCGTACTGATA AGAGGTTGTCACGCCGCA ACAT TGCAACGCGATAACCTCA TTTTCAATTAACACG TERM 3095 2466641 - 2466604 - f 100 -13.5 -3.35798 | opp_overlap 2466604 2466603 AGTTCGTACTGATAA GAGGTTGTCACGCCGCA ACAT TGCAACGCGATAACCTC ATTTTCAATTAACAC TERM 3096 2466688 - 2466676 - f 75 -3.3 -5.11613 | ATAGTATTGAAAAAA CGATC ATA GCTCG CCACTATAAGCCTCA Shewmr7_2089 2466751 - 2467653 + | LysR family transcriptional regulator Shewmr7_2090 2469985 - 2467832 - | SrpA-related protein TERM 3097 2469795 - 2469805 + g 71 -6.8 -4.12942 | GGTGCAAGTGCCCCA CTCG CTT CGAG TTTTGGCGCATTTAG Shewmr7_2091 2470251 - 2469988 - | methyl-accepting chemotaxis protein TERM 3098 2470116 - 2470127 + g 71 -7.2 -4.03234 | TATCGGGTTCATCTA CCGC CTTA GCGG TTTCTGTCGGCGCAG thiH 2471491 - 2470376 - | thiamine biosynthesis protein ThiH thiG 2472252 - 2471488 - | thiazole synthase Shewmr7_2094 2472457 - 2472254 - | thiamine biosynthesis protein ThiS Shewmr7_2095 2473473 - 2472454 - | UBA/THIF-type NAD/FAD binding protein TERM 3099 2472500 - 2472526 + g 79 -8 -4.37886 | overlap 2472502 AATGAAACGATTGCG GTCGAATGCTGG GTG TTAGCATTCGCC TTTTCTACGCGCTCG Shewmr7_2096 2475167 - 2473470 - | thiamine-phosphate pyrophosphorylase Shewmr7_2097 2477332 - 2475170 - | thiamine biosynthesis protein ThiC TERM 3100 2477259 - 2477277 + g 82 -11.6 -3.66356 | opp_overlap 2477243, overlap 2477275 GCTTGCGCCTGGGCG CGCGCCGC ACG GCGGCTCG TTTGCCCTTGGGCAT Shewmr7_2098 2478913 - 2477765 - | hypothetical protein TERM 3101 2479104 - 2479125 + H 80 -10.3 -3.47617 | opp_overlap 2479104, overlap 2479121 AAACCCTAAAATAAA TTAGCTTAC ACGT GTAAGCTAA TTATGGCTTTCCAAT TERM 3102 2479125 - 2479104 - H 100 -10.3 -4.69559 | opp_overlap 2479104 2479121 AAACCCTAAAATAAA TTAGCTTAC ACGT GTAAGCTAA TTATGGCTTTCCAAT TERM 3103 2479251 - 2479235 - g 76 -5.1 -4.75372 | overlap 2479243 ATGAGTCATGAAAAA CCATTGA ATA TCAGTGG ATATAGCCTTAGTGA Shewmr7_2099 2479190 - 2479873 + | hemolysin III family channel protein TERM 3104 2479899 - 2479915 + T 100 -12.3 -5.4251 | opp_overlap 2479899 TGCCTTTCCTCACAA GCCATCC TCA GGATGGC TTTTTTATGTCTGCG TERM 3105 2479915 - 2479899 - T 95 -12.3 -3.28712 | opp_overlap 2479899 TGCCTTTCCTCACAA GCCATCC TCA GGATGGC TTTTTTATGTCTGCG Shewmr7_2100 2480494 - 2479964 - | NUDIX hydrolase TERM 3106 2480090 - 2480102 + g 74 -2.6 -5.1101 | GATATTGATCCATTC TGGG CGCAT CCCG TTTTTTAACTCATGG TERM 3107 2480265 - 2480283 + g 89 -10.2 -4.29508 | opp_overlap 2480244 2480263 AAGGGTGCTAACACT CTGGCGGC AAT GGCGCCAG TTTCTTCCTGTAACT TERM 3108 2480578 - 2480592 + r 70 -9.2 -2.77962 | overlap 2480577 TAACGCCAAGATGTA GCGCTC AAT GGGCGC ATTTGACCTATAGGG Shewmr7_2101 2481450 - 2480608 - | hypothetical protein TERM 3109 2481331 - 2481317 - G 71 -5.6 -4.49939 | opp_overlap 2481316, overlap 2481318 ACACAATCGACAAAA TGCACC TTA GGTGCG GCATTTCTTTGCAGT Shewmr7_2102 2481741 - 2483852 + | alpha-glucosidase TERM 3110 2483921 - 2483892 - f 93 -12.3 -3.1883 | opp_overlap 2483892 AAAAACCCCGAGCAA TAGTCACCGAGAA ACCC TTCTTGGTGACTA TTTTTTTATTGAGCC TERM 3111 2483892 - 2483921 + F 100 -14.5 -5.7946 | opp_overlap 2483892 AAAAACCCCGAGCAA TAGTCACCGAGAA ACCC TTCTTGGTGACTA TTTTTTTATTGAGCC TERM 3112 2484210 - 2484232 + F 79 -7.7 -4.25859 | gap 1 TTTCAAGCCATTGCC CGACTGCGCC CTTA GGTGCAG-CG TTATTTTCACTTGCA TERM 3113 2484339 - 2484349 + G 70 -8.2 -3.73294 | overlap 2484344 CCATCACCCAGCACT GGCG ATA CGCC TTTAGCGTATTTTTA TERM 3114 2484344 - 2484358 + G 76 -5.7 -4.72272 | overlap 2484339 ACCCAGCACTGGCGA TACGC CTTTA GCGTA TTTTTACTCGGGACA Shewmr7_2103 2484225 - 2484986 + | AraC family transcriptional regulator Shewmr7_2104 2485023 - 2485472 + | alkylhydroperoxidase TERM 3115 2485492 - 2485523 + T 81 -10.9 -3.37057 | opp_overlap 2485496, overlap 2485495 2485496 AGATAAACCGACAAA TAAACAGGGCACC GAATCG GGTGCCCTGCTTG TTGATATCTCTGTGT TERM 3116 2485495 - 2485520 + T 86 -10.4 -3.81089 | opp_overlap 2485496, overlap 2485492 2485496 TAAACCGACAAATAA ACAGGGCACC GAATCG GGTGCCCTGC TTGTTGATATCTCTG TERM 3117 2485519 - 2485496 - T 100 -13.9 -4.59993 | opp_overlap 2485495 2485492 2485496 AAACCGACAAATAAA CAGGGCACC GAATCG GGTGCCCTG CTTGTTGATATCTCT TERM 3118 2485496 - 2485519 + T 95 -13.9 -2.8793 | opp_overlap 2485496, overlap 2485495 2485492 AAACCGACAAATAAA CAGGGCACC GAATCG GGTGCCCTG CTTGTTGATATCTCT Shewmr7_2105 2486565 - 2485558 - | hypothetical protein TERM 3119 2486536 - 2486519 - G 74 -2 -5.14563 | gap 1, overlap 2486522 GCTTGCAGTAAAAAA TCATGGC GCTTG GCCA-GA GCCGTCGATAACAGC Shewmr7_2106 2487631 - 2486753 - | alpha/beta hydrolase fold TERM 3120 2487596 - 2487584 - G 73 -6.3 -4.4891 | opp_overlap 2487579 2487584 GCCAGTATCAGAAAA GGTTT TAA AAACC TTTGCCTGTTGTAAT Shewmr7_2107 2488059 - 2487766 - | YCII-related TERM 3121 2488615 - 2488651 + H 100 -15.4 -5.00884 | opp_overlap 2488614 TGAAAATGAATTTAT TGGCGAATATGCTTCT GAGGG AGAGGTATATTCGCCA TTTTTTCACCCACAT TERM 3122 2488780 - 2488766 - H 84 -11.4 -3.17798 | CGATAAATGACTCAA GGCAGC CCC GCTGCC CGCTACTGAAGGGAA TERM 3123 2489288 - 2489304 + G 100 -6.5 -5.252 | opp_overlap 2489236 2489287, overlap 2489236 AGCAGCGCACCCAAG GCTATGC TAT GCAAAGC TTTTTTATCGGCATC Shewmr7_2108 2488801 - 2490396 + | major facilitator transporter TERM 3124 2491985 - 2491975 - g 70 -8.2 -3.74251 | TACAGCTCGACCAAA CGGC GAT GCCG ATCATGCTCGGCTGG TERM 3125 2492096 - 2492067 - g 74 -7.7 -4.19472 | opp_overlap 2492067 2492067, overlap 2492068 CAAGAGATGCTAAAA GCCGCGGCGGACT TTTT AGTCAGCGGCGGT GAGGTGAATCTTGAC TERM 3126 2492095 - 2492068 - g 74 -11.2 -3.1096 | opp_overlap 2492067 2492067, overlap 2492067 AAGAGATGCTAAAAG CCGCGGCGGACT TTTT AGTCAGCGGCGG TGAGGTGAATCTTGA TERM 3127 2492160 - 2492143 - g 74 -7.7 -4.1899 | TTACGCCACCGAAAA CCCAACA AGAA CGTTGGG AAGAACAAGCTGGTT Shewmr7_2109 2490534 - 2493050 + | glucan 1,4-alpha-glucosidase TERM 3128 2493235 - 2493249 + T 89 -7.1 -5.04987 | overlap 2493247 GATGGTAATGCTACC GCGTG GCTTG CACGC TTTTTTGGGCGTATT Shewmr7_2110 2494042 - 2493230 - | AraC family transcriptional regulator Shewmr7_2111 2494122 - 2495510 + | sodium/sulphate symporter Shewmr7_2112 2496262 - 2495669 - | hypothetical protein Shewmr7_2113 2497928 - 2496264 - | hypothetical protein TERM 3129 2496697 - 2496686 - G 73 -5.8 -4.56597 | GTTTTGTCGGAAAAA TGGG ATAT CCCA TAAAGTTGGCATTTT Shewmr7_2114 2499225 - 2497945 - | PqiA family integral membrane protein TERM 3130 2498880 - 2498867 - G 76 -5.3 -4.75308 | ATGAACATTGAAAAA CTGAT ATAA ATCAG CGGCAAAATCACCAC TERM 3131 2499333 - 2499295 - R 100 -24.1 -4.15657 | gap 1, opp_overlap 2499296 2499297, overlap 2499296 TGAGAAGCAGATAAA GCGCTCTTGCCGTGGGGA GAAC TCCCCACGGCAAGAGC-C TTCTCATTCATCCTT TERM 3132 2499333 - 2499296 - R 100 -24.3 -3.08671 | opp_overlap 2499296 2499297, overlap 2499295 GAGAAGCAGATAAAG CGCTCTTGCCGTGGGGA GAAC TCCCCACGGCAAGAGCC TTCTCATTCATCCTT TERM 3133 2499296 - 2499333 + r 100 -24.3 -3.55145 | opp_overlap 2499295 2499296, overlap 2499297 GAGAAGCAGATAAAG CGCTCTTGCCGTGGGGA GAAC TCCCCACGGCAAGAGCC TTCTCATTCATCCTT TERM 3134 2499297 - 2499332 + r 100 -27.8 -2.72364 | opp_overlap 2499295 2499296, overlap 2499296 AGAAGCAGATAAAGC GCTCTTGCCGTGGGGA GAAC TCCCCACGGCAAGAGC CTTCTCATTCATCCT Shewmr7_2115 2500817 - 2499348 - | RND efflux system outer membrane lipoprotein Shewmr7_2116 2503927 - 2500820 - | acriflavin resistance protein TERM 3135 2501029 - 2501019 - G 71 -6.8 -4.15044 | CTGTCGGTCAACAAA GGGA TCA TCCC GAGAGCCGTTGTCAG Shewmr7_2117 2505036 - 2503924 - | RND family efflux transporter MFP subunit TERM 3136 2504520 - 2504532 + g 73 -3.3 -5.0133 | opp_overlap 2504520 GCTCGGTGTAACCTA GGGCA TCC TGCGC TTTTTTAAGCGACTG Shewmr7_2118 2506027 - 2505122 - | LysR family transcriptional regulator TERM 3137 2507943 - 2507928 - g 76 -5.4 -4.83169 | gap 1, opp_overlap 2507927 2507928, overlap 2507930 AGTGTTCGATAAAAA TACCGCC TTC GGCGG-A GATTTTGCCGGCGCT TERM 3138 2507942 - 2507930 - g 84 -10.5 -4.03995 | opp_overlap 2507928 2507927, overlap 2507928 TGTTCGATAAAAATA CCGCC TTC GGCGG AGATTTTGCCGGCGC Shewmr7_2119 2506828 - 2509500 + | TonB-dependent receptor TERM 3139 2509543 - 2509560 + F 100 -12.7 -4.68545 | opp_overlap 2509543 TTCCTAAAACACAAA GCCGAGC AACT GCTCGGC TTTTATCTATTGGCT TERM 3140 2509560 - 2509543 - f 100 -12.7 -4.45168 | opp_overlap 2509543 TTCCTAAAACACAAA GCCGAGC AACT GCTCGGC TTTTATCTATTGGCT Shewmr7_2120 2509935 - 2510339 + | hypothetical protein Shewmr7_2121 2510336 - 2511481 + | succinyl-diaminopimelate desuccinylase TERM 3141 2511724 - 2511698 - g 100 -18 -3.57144 | TGCTGGAGGCTCAAA CCGCCCTCGCCT TTA AGGCGATGGCGG ACAGCGCCGCCAAAG TERM 3142 2511765 - 2511776 + G 71 -7.2 -4.07687 | CCTCGCGATTTGCTC GGCC TATC GGCC TTTTGACAGGCAACT TERM 3143 2512061 - 2512073 + G 88 -4.1 -5.56372 | GGCTACTCCAGCACG CCAAG GAT TTTGG TTTTTATTTTCCTTT Shewmr7_2122 2511475 - 2512287 + | peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins TERM 3144 2512710 - 2512726 + G 70 -2.9 -4.75309 | GCGCGCGTCAATGCA CTGGTGA TGC TCGACAG TTTTATTGGGTTTGA Shewmr7_2123 2512353 - 2513183 + | alpha/beta hydrolase fold Shewmr7_2124 2513337 - 2513942 + | carbonate dehydratase TERM 3145 2513985 - 2514013 + F 91 -10.4 -4.18161 | opp_overlap 2513992, overlap 2513992 CGCTACGTTTACCCG CCAAAAACCTGC CTAGT GCAGGTTTTTTG TTTTGCAGCTTTGTC TERM 3146 2513992 - 2514006 + F 100 -7.1 -5.79595 | opp_overlap 2513992, overlap 2513985 TTTACCCGCCAAAAA CCTGC CTAGT GCAGG TTTTTTGTTTTGCAG TERM 3147 2514006 - 2513992 - f 81 -7.1 -4.58395 | opp_overlap 2513985 2513992 TTTACCCGCCAAAAA CCTGC CTAGT GCAGG TTTTTTGTTTTGCAG TERM 3148 2514909 - 2514891 - g 77 -8.8 -4.08767 | TCGATTCTGTTAAAA CCATCACC TGT GGTGAAGG CGGCGCAGTGATCAC Shewmr7_2125 2514332 - 2515519 + | DegT/DnrJ/EryC1/StrS aminotransferase Shewmr7_2126 2515539 - 2516609 + | iron-containing alcohol dehydrogenase TERM 3149 2516645 - 2516629 - f 76 -9.4 -3.49858 | opp_overlap 2516629 TCAAGCAGATGACAA GGGCTC GTTGT GAGCCC TTTTGTCTATCTACA TERM 3150 2516629 - 2516645 + F 100 -10.1 -4.64844 | opp_overlap 2516629 TCAAGCAGATGACAA GGGCTCG TTG TGAGCCC TTTTGTCTATCTACA Shewmr7_2127 2516692 - 2517429 + | 3-deoxy-manno-octulosonate cytidylyltransferase Shewmr7_2128 2517458 - 2517694 + | hypothetical protein TERM 3151 2517748 - 2517735 - T 100 -9.5 -4.7497 | opp_overlap 2517735 TTTATCCATCAAAAA GGCGC AATA GCGCC TTTTTTGTGGGAGAG TERM 3152 2517735 - 2517748 + T 100 -9.5 -5.24129 | opp_overlap 2517735 TTTATCCATCAAAAA GGCGC AATA GCGCC TTTTTTGTGGGAGAG TERM 3153 2518021 - 2518042 + T 71 -2.1 -5.14965 | overlap 2518023 GAAAAAACGCGCAGT GGGTTGACG TCGC CGCCAGCAC TTTTTTGCTAGCGAT Shewmr7_2129 2518492 - 2518070 - | GCN5-related N-acetyltransferase Shewmr7_2130 2519033 - 2518587 - | hypothetical protein Shewmr7_2131 2519238 - 2519020 - | hypothetical protein TERM 3154 2519061 - 2519098 + g 76 -6.4 -4.63089 | gap 2, overlap 2519063 2519064 AGATGCCTAACGAGT TTTGCT-CAACGG-TGCG GTCA CGCATCCGTTGTAGCGTA TTGTTTTTTGAGGTG TERM 3155 2519063 - 2519096 + g 75 -9 -3.91465 | gap 2, overlap 2519061 2519064 ATGCCTAACGAGTTT TGCT-CAACGG-TGCG GTCA CGCATCCGTTGTAGCG TATTGTTTTTTGAGG TERM 3156 2519064 - 2519095 + g 70 -10.3 -2.93795 | gap 2, overlap 2519063 2519061 TGCCTAACGAGTTTT GCT-CAACGG-TGCG GTCA CGCATCCGTTGTAGC GTATTGTTTTTTGAG TERM 3157 2519502 - 2519491 - H 85 -7.2 -4.78107 | opp_overlap 2519491 TACCATCAGTAAAAA CGCG CATG CGCG TTTTCCAAACCTATT TERM 3158 2519491 - 2519502 + H 73 -7.2 -4.09511 | opp_overlap 2519491 TACCATCAGTAAAAA CGCG CATG CGCG TTTTCCAAACCTATT Shewmr7_2132 2519672 - 2520631 + | integron integrase TERM 3159 2520829 - 2520805 - T 100 -11.5 -5.26316 | opp_overlap 2520805 CTACGCCATAAAAAA GGCCAAGTG TGGAGAG CACTTGGCC TTTGGCTGGAGATGG TERM 3160 2520805 - 2520829 + T 93 -12.2 -3.65351 | opp_overlap 2520805 CTACGCCATAAAAAA GGCCAAGTGT GGAGA GCACTTGGCC TTTGGCTGGAGATGG Shewmr7_2133 2521446 - 2520859 - | periplasmic nitrate reductase subunit NapC Shewmr7_2134 2521940 - 2521455 - | periplasmic nitrate reductase subunit NapB TERM 3161 2521782 - 2521804 + g 79 -12.6 -3.06831 | overlap 2521772 GATATCTTTGTTCAG CACCGCCTGC ATG GCGGGCGGAG TTGGCTCAACGTTGA Shewmr7_2135 2524440 - 2521951 - | nitrate reductase Shewmr7_2136 2524700 - 2524443 - | NapD family protein TERM 3162 2524764 - 2524746 - R 72 -9.5 -3.07816 | TCTGTATTGACTCAA CCAGCCC CCGGT GGGCCGG TGAAAATTTGACTAA Shewmr7_2137 2524900 - 2524742 - | periplasmic nitrate reductase NapE TERM 3163 2525493 - 2525446 - R 76 -10.1 -3.37975 | gap 1, opp_overlap 2525480 AGTGACCAGTGATAA CTCTT-GCCACGACACACAT CGTAGGGGC ATGTGCGTCGCGGCTAAAAG CGGCTACTAAATTGT TERM 3164 2525530 - 2525561 + r 70 -5.8 -4.30844 | opp_overlap 2525535, overlap 2525535 GCAAAACCGCGCAAT AAAAATGCCGAACC ATAA GGCTCGGCATTTAA TTTTACTGATGAGAT TERM 3165 2525556 - 2525535 - R 100 -12.3 -5.06816 | opp_overlap 2525530 2525535 ACCGCGCAATAAAAA TGCCGAACC ATAA GGCTCGGCA TTTAATTTTACTGAT TERM 3166 2525535 - 2525556 + r 93 -10.1 -4.24384 | opp_overlap 2525535, overlap 2525530 ACCGCGCAATAAAAA TGCCGAACC ATAA GGCTCGGCA TTTAATTTTACTGAT Shewmr7_2138 2529507 - 2525626 - | ATP-dependent helicase HrpA TERM 3167 2526259 - 2526273 + g 71 -7.8 -4.08216 | TGCCTTGTTGGGCAG CGCCTG TTG CAGGTG TTTTACCGGCGATGG TERM 3168 2528039 - 2528018 - G 74 -10.1 -3.56821 | overlap 2528009 ACCATACGCGCTAAA CGCGGATCC ACCG GGATCTGCG ATAACTGACGCCCAA TERM 3169 2529548 - 2529509 - R 83 -8.8 -4.20806 | gap 1, overlap 2529533 GAGTTCAAAACCAAA TTCCATTGCTAGCATCG AAAACAG CGATCCTAGCAA-GGAA CGGGACGTATTGGTA Shewmr7_2139 2530052 - 2529636 - | signal transduction protein TERM 3170 2530246 - 2530303 + r 70 -7.1 -3.75024 | gap 1, opp_overlap 2530255 2530257, overlap 2530253 ATTTTGAACGGGATG GCTTAGAG-ATATTGCCTTAGCGCATGT TAA GCACGCGCTAAGGCAATAGACTGTATCC TTATTGATCCTGCCA TERM 3171 2530253 - 2530296 + r 93 -12.6 -3.06573 | gap 1, opp_overlap 2530255 2530257, overlap 2530246 ACGGGATGGCTTAGA G-ATATTGCCTTAGCGCATGT TAA GCACGCGCTAAGGCAATAGAC TGTATCCTTATTGAT TERM 3172 2530293 - 2530255 - R 100 -21.3 -2.87931 | opp_overlap 2530253 2530246, overlap 2530257 GGGATGGCTTAGAGA TATTGCCTTAGCGCATG TTAAG CACGCGCTAAGGCAATA GACTGTATCCTTATT TERM 3173 2530291 - 2530257 - R 100 -19.5 -2.9914 | opp_overlap 2530253 2530246, overlap 2530255 GATGGCTTAGAGATA TTGCCTTAGCGCATG TTAAG CACGCGCTAAGGCAA TAGACTGTATCCTTA Shewmr7_2140 2531335 - 2530304 - | peptidase T2, asparaginase 2 TERM 3174 2530869 - 2530857 - G 74 -7.7 -4.15565 | GGCACCAGCGTAAAA CCTTG GGT CAAGG CAAACTCCTCGGCGC Shewmr7_2141 2531537 - 2533312 + | surface antigen (D15) TERM 3175 2534189 - 2534224 + G 70 -2.4 -4.94992 | opp_overlap 2534181 2534200, overlap 2534200 CGGAAAAGCAAGCAT CCACTGAAGAATGGGC ACTT GCCCATTTACCACAGG TTTTTATGCCTTTCC TERM 3176 2534213 - 2534200 - g 70 -8.1 -3.68569 | opp_overlap 2534189 2534200, overlap 2534181 GCATCCACTGAAGAA TGGGC ACTT GCCCA TTTACCACAGGTTTT TERM 3177 2535507 - 2535521 + G 70 -8.6 -3.65351 | opp_overlap 2535507 GGAGTCAACACTCAA GGCTTA CTA TAAGCC TTTGGATGCCCATGA Shewmr7_2142 2533309 - 2537505 + | hypothetical protein TERM 3178 2537513 - 2537537 + T 100 -16.5 -2.56046 | opp_overlap 2537509 2537506 TCAAGTAATGATGGA TCCCGCGTAAC CAT GTTGCGCGGGA TGACTTAGCGTTTAA TERM 3179 2537577 - 2537591 + T 100 -8.5 -5.29385 | opp_overlap 2537577 ACAGCCACAAAAAAA GCGCC CTATA GGCGC TTTTTTGCTTCAATT TERM 3180 2537591 - 2537577 - T 100 -9.2 -5.65177 | opp_overlap 2537577 ACAGCCACAAAAAAA GCGCCC TAT AGGCGC TTTTTTGCTTCAATT Shewmr7_2143 2537900 - 2537613 - | 50S ribosomal protein L25P Shewmr7_2144 2538213 - 2538647 + | hypothetical protein Shewmr7_2145 2539146 - 2538598 - | hypothetical protein TERM 3181 2539130 - 2539117 - G 72 -8.1 -3.95324 | GAGGCCTAACAACAA CTGCC TACG GGCAG GACAAAGTAACGTCA Shewmr7_2146 2540946 - 2539270 - | peptidoglycan binding domain-containing protein TERM 3182 2541116 - 2541081 - R 100 -15.6 -4.51799 | opp_overlap 2541081 2541087, overlap 2541087 AGTAAAGGGATAAAA CAAAAATGCCACTGAC AGAC GTCAGTGGCATTTCGG TTATTTGACAACAAT TERM 3183 2541081 - 2541116 + r 100 -13.4 -3.90922 | opp_overlap 2541081 2541087, overlap 2541087 AGTAAAGGGATAAAA CAAAAATGCCACTGAC AGAC GTCAGTGGCATTTCGG TTATTTGACAACAAT TERM 3184 2541087 - 2541110 + r 100 -15.4 -3.89435 | opp_overlap 2541081 2541087, overlap 2541081 GGGATAAAACAAAAA TGCCACTGAC AGAC GTCAGTGGCA TTTCGGTTATTTGAC TERM 3185 2541110 - 2541087 - R 100 -15.4 -5.54907 | opp_overlap 2541087 2541081, overlap 2541081 GGGATAAAACAAAAA TGCCACTGAC AGAC GTCAGTGGCA TTTCGGTTATTTGAC Shewmr7_2147 2543360 - 2541177 - | glucosyltransferase MdoH TERM 3186 2542363 - 2542376 + g 70 -8.1 -3.66921 | TGGCTTAGGATATGG CCACC AAAT GGTGG TTTACCCTTAAGGTT TERM 3187 2542449 - 2542460 + g 74 -4.4 -4.82901 | GGCGTTATGGCCCCA GAAG TTAC CTTC TTTTTGTACCCACCA TERM 3188 2542818 - 2542797 - G 76 -5.2 -4.77036 | gap 1, opp_overlap 2542797, overlap 2542799 GCGCAGCACTAAAAA CG-CCTGTT CTTCT AACAGGGCG ATTTCAGGATCTGTG mdoG 2545021 - 2543384 - | glucan biosynthesis protein G TERM 3189 2544873 - 2544892 + g 73 -5.6 -4.64861 | GTCGCCTTAGGTGGA CTCACCAC AGGT GTGGCGGG TTTGTTTTCAGCAGG Shewmr7_2149 2546848 - 2545448 - | periplasmic sensor signal transduction histidine kinase TERM 3190 2545641 - 2545656 + g 70 -2.5 -4.9792 | TCGGGAGTCATACCT TGGCC ACGGTC GGCTA TTTTTATCTCAAGTC Shewmr7_2150 2547621 - 2546962 - | two component transcriptional regulator Shewmr7_2151 2548534 - 2547632 - | ApbE family lipoprotein TERM 3191 2548599 - 2548567 - R 88 -9.9 -4.18197 | opp_overlap 2548569 2548572, overlap 2548568 2548572 ATGGCTTAGCCAAAA CTCAATATGGGCAGC AAG GCTACCCATATTGTT TGCGCTGATAGTTTG TERM 3192 2548598 - 2548568 - R 100 -13.4 -3.10597 | opp_overlap 2548569 2548572, overlap 2548567 2548572 TGGCTTAGCCAAAAC TCAATATGGGCAGC AAG GCTACCCATATTGT TTGCGCTGATAGTTT TERM 3193 2548569 - 2548597 + r 100 -14.7 -3.6284 | opp_overlap 2548568 2548567 2548572, overlap 2548572 GGCTTAGCCAAAACT CAATATGGGCAGC AAG GCTACCCATATTG TTTGCGCTGATAGTT TERM 3194 2548572 - 2548594 + r 89 -10.6 -3.94634 | opp_overlap 2548572 2548568 2548567, overlap 2548569 TTAGCCAAAACTCAA TATGGGCAGC AAG GCTACCCATA TTGTTTGCGCTGATA TERM 3195 2548594 - 2548572 - R 100 -12.8 -3.38281 | opp_overlap 2548569 2548572, overlap 2548568 2548567 TTAGCCAAAACTCAA TATGGGCAGC AAG GCTACCCATA TTGTTTGCGCTGATA Shewmr7_2152 2549983 - 2548637 - | hypothetical protein Shewmr7_2153 2550297 - 2550076 - | putative lipoprotein Shewmr7_2154 2550783 - 2550301 - | redoxin domain-containing protein TERM 3196 2551033 - 2551014 - H 76 -8 -4.09243 | opp_overlap 2551014 CACATCTCTTGAAAA TTCTTGAT ATGC ATCAAGAA TTCTCTATCCCCTAA TERM 3197 2551014 - 2551033 + H 70 -8 -3.59698 | opp_overlap 2551014 CACATCTCTTGAAAA TTCTTGAT ATGC ATCAAGAA TTCTCTATCCCCTAA TERM 3198 2551242 - 2551224 - g 70 -8.1 -3.74713 | opp_overlap 2551223 2551226 GAAAAATTGCAACAA CACGGCA TTACC CGCCGTG ACTTTATGAAGTGGA Shewmr7_2155 2551119 - 2552255 + | hydrogenase (NiFe) small subunit HydA Shewmr7_2156 2552259 - 2553962 + | nickel-dependent hydrogenase, large subunit Shewmr7_2157 2553984 - 2554658 + | Ni/Fe-hydrogenase, b-type cytochrome subunit TERM 3199 2554700 - 2554727 + G 100 -18.6 -4.47551 | GTATTGGCAATGTCC TGTACGCCGATG AAGG CATCGGCGTACA TTTTGTCAATTACAT Shewmr7_2158 2554666 - 2555244 + | hydrogenase expression/formation protein TERM 3200 2555658 - 2555644 - g 74 -7.1 -4.42386 | overlap 2555655 CTGCCACGGAGAAAA GCGCT TAACC AGCGC CCAAAAGGCGTTAAC TERM 3201 2556293 - 2556314 + G 70 -10.1 -3.2327 | opp_overlap 2556287 CATACCATAGCGGAT GCAGCCCTG TTTG CAGCGCTGC TTAATGGTAAATTCA Shewmr7_2159 2555225 - 2557075 + | hypothetical protein TERM 3202 2557841 - 2557828 - g 76 -8.1 -4.15453 | opp_overlap 2557828 2557827 2557833 2557836 CAATTGAGTTTAAAA TCGCC TCAG GGCGA GTTACTTGCACCTAA TERM 3203 2558178 - 2558155 - g 82 -10.4 -3.86015 | overlap 2558160 CAGGCGCTGGATAAA CACAATCTGA GCCA TCAGATTGCG CCTAATATCCCAAAA Shewmr7_2160 2557147 - 2559669 + | (NiFe) hydrogenase maturation protein HypF Shewmr7_2161 2559907 - 2560668 + | hydrogenase accessory protein HypB Shewmr7_2162 2560668 - 2560913 + | hydrogenase assembly chaperone hypC/hupF Shewmr7_2163 2560972 - 2562111 + | hydrogenase expression/formation protein HypD Shewmr7_2164 2562104 - 2563123 + | hydrogenase expression/formation protein HypE Shewmr7_2165 2563123 - 2563479 + | hydrogenase nickel insertion protein HypA TERM 3204 2563551 - 2563523 - T 100 -16.9 -4.05747 | opp_overlap 2563523 CACACTTCATACAAA TGGGCTTTAAGCA TTC CGCTTAAAGCCCA TTTTGTTTAGGTTCA TERM 3205 2563523 - 2563551 + T 100 -16.2 -4.94058 | opp_overlap 2563523 CACACTTCATACAAA TGGGCTTTAAGC ATTCC GCTTAAAGCCCA TTTTGTTTAGGTTCA Shewmr7_2166 2564523 - 2563585 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 3206 2563774 - 2563787 + g 71 -5.3 -4.56597 | AAACTGGCGTGAAGC TTGGT TATA ACCAA TTTTTACCGGCAGCA TERM 3207 2564604 - 2564571 - R 100 -18.4 -4.76075 | opp_overlap 2564578 AGCATAGGAAGAAAA TAGGAAAGCCACTC GCGATG GAGTGGCTTTCCTA TCAAACTTAAAGAAA TERM 3208 2564578 - 2564597 + r 81 -9.3 -3.8377 | opp_overlap 2564571 GAAGAAAATAGGAAA GCCACTC GCGATG GAGTGGC TTTCCTATCAAACTT Shewmr7_2167 2564916 - 2564620 - | integration host factor, alpha subunit pheT 2567307 - 2564920 - | phenylalanyl-tRNA synthetase subunit beta TERM 3209 2565283 - 2565267 - G 73 -5.1 -4.74504 | opp_overlap 2565270, overlap 2565270 ATTCCAACTCAAAAA CGATGGT TTT ACCATTG AGTCCAAAAGGCTTC TERM 3210 2566586 - 2566596 + g 82 -6.8 -4.7497 | ATAGAACGAATACCG CTGC GAC GCAG TTTTTCCTGCATCCA pheS 2568305 - 2567322 - | phenylalanyl-tRNA synthetase subunit alpha Shewmr7_2170 2568776 - 2570293 + | methyl-accepting chemotaxis sensory transducer TERM 3211 2570300 - 2570341 + F 75 -5.3 -4.77173 | gap 1, opp_overlap 2570310 2570313, overlap 2570310 AAAGTCTAATCGCCC CACTCAAGAA-GAAGGGATA GTG TATCCCTTCTTTCTTCTGTA TTTCTTTTGTAACGG TERM 3212 2570330 - 2570310 - f 100 -12.7 -3.67597 | opp_overlap 2570300 2570310, overlap 2570313 CGCCCCACTCAAGAA GAAGGGATA GTG TATCCCTTC TTTCTTCTGTATTTC TERM 3213 2570310 - 2570330 + F 100 -12.7 -4.48664 | opp_overlap 2570310 2570313, overlap 2570300 CGCCCCACTCAAGAA GAAGGGATA GTG TATCCCTTC TTTCTTCTGTATTTC TERM 3214 2570327 - 2570313 - f 77 -8.6 -3.97307 | opp_overlap 2570310 2570300, overlap 2570310 CCCACTCAAGAAGAA GGGATA GTG TATCCC TTCTTTCTTCTGTAT Shewmr7_2171 2570645 - 2572594 + | TonB-dependent receptor TERM 3215 2572603 - 2572620 + T 100 -12.7 -4.77759 | CTTTTAATCCTTAAC GGCCTGC AACT GCAGGCC TTTTTCATCCGTTGT Shewmr7_2172 2574648 - 2572669 - | helicase c2 TERM 3216 2572762 - 2572747 - G 76 -6.1 -4.64598 | CAATGAGTTTAAAAA CGCCT GTCCGT AGGCG CGATTCACAATTCGA TERM 3217 2575131 - 2575141 + G 76 -5.4 -4.82901 | opp_overlap 2575131, overlap 2575117 TGTGTCACTCGAAAA TGGT GGC ACCA TTTTTATGAGGCAGG Shewmr7_2173 2574952 - 2575293 + | hypothetical protein Shewmr7_2174 2575381 - 2575833 + | acyltransferase domain-containing protein Shewmr7_2175 2575888 - 2576214 + | hypothetical protein Shewmr7_2176 2576281 - 2577108 + | hypothetical protein TERM 3218 2577152 - 2577112 - f 100 -11.2 -5.29716 | overlap 2577115 2577116 TTAACACAATAAAAA GGATGTCACAGCGCTAAT TCAGC ATTAGCGCTGTGACTGAC ACTCATCCGCACTCG TERM 3219 2577149 - 2577115 - f 100 -15.9 -3.43245 | overlap 2577112 2577116 ACACAATAAAAAGGA TGTCACAGCGCTAAT TCAGC ATTAGCGCTGTGACT GACACTCATCCGCAC TERM 3220 2577148 - 2577116 - f 100 -19.4 -2.6432 | overlap 2577115 2577112 CACAATAAAAAGGAT GTCACAGCGCTAAT TCAGC ATTAGCGCTGTGAC TGACACTCATCCGCA TERM 3221 2577615 - 2577594 - f 76 -10.1 -3.25304 | opp_overlap 2577594 AAAGATGATCACTAA CCCCTGGAA GGAA TTCCGGGGG TTTTTGCTTTTAGGC TERM 3222 2577594 - 2577615 + F 100 -12.3 -5.0925 | opp_overlap 2577594 AAAGATGATCACTAA CCCCTGGAA GGAA TTCCGGGGG TTTTTGCTTTTAGGC hisG 2577774 - 2578673 + | ATP phosphoribosyltransferase Shewmr7_2178 2578677 - 2579978 + | histidinol dehydrogenase TERM 3223 2580840 - 2580863 + G 76 -5.9 -4.7254 | overlap 2580814 CTTTCAAAGGCCTTT GCCTTAGCG GGTGCG CGCTGCGGC TTTTTGCTCGCCAAT Shewmr7_2179 2580045 - 2581265 + | histidinol phosphate aminotransferase Shewmr7_2180 2581348 - 2582439 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 2582586 - 2583251 + | imidazole glycerol phosphate synthase subunit HisH Shewmr7_2182 2583386 - 2584123 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 3224 2584235 - 2584201 - g 70 -10.7 -2.87211 | ATTGTTGGCGACATA GTGCCACTC-GCGGCGC GTT ACGCCGCAGAG-GGCGC CGACGAACTGGTGTT TERM 3225 2584621 - 2584609 - g 76 -4.7 -5.03945 | GAAGAAGTACAAAAA CGCGG CTG CGGCG AAATCGTGCTCAACG TERM 3226 2584787 - 2584801 + G 74 -11.4 -3.08679 | CGAAGGTGGATGCAG CGCTGG CGG CCAGCG TATTCCATAAAGCCA Shewmr7_2183 2584105 - 2584878 + | imidazole glycerol phosphate synthase subunit HisF TERM 3227 2585019 - 2585004 - g 71 -6.1 -4.41633 | opp_overlap 2585001, overlap 2585001 GACTGGGAAAAACAA CAGGG GCTTAT CCCTG CGGTTATCCAAAATC Shewmr7_2184 2584923 - 2585582 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 3228 2585642 - 2585605 - f 75 -10.5 -2.74514 | opp_overlap 2585603 2585599 2585608 TCAAACCTCGAAGCA CCACTCTGCCGCATTCC TTTT GGTCTGCGGCAGAGTAC TCTCCATTTTGCATT TERM 3229 2585608 - 2585639 + F 100 -14.4 -2.6999 | opp_overlap 2585605, overlap 2585603 2585599 AACCTCGAAGCACCA CTCTGCCGCATTCC TTTT GGTCTGCGGCAGAG TACTCTCCATTTTGC TERM 3230 2586217 - 2586194 - f 71 -6.8 -4.1552 | gap 1, overlap 2586197 TAGCTCCTCAATAAA GCACTCAACTG AGA CAGTTGAGC-C ATTAATAAAGACGTT TERM 3231 2586215 - 2586197 - f 86 -11.8 -3.10244 | overlap 2586194 CTCCTCAATAAAGCA CTCAACTG AGA CAGTTGAG CCATTAATAAAGACG TERM 3232 2587267 - 2587281 + G 95 -6.4 -5.42259 | ATGCGGCAATCGCCC TCGTGA TCC TCGCGA TTTTTTTACCCGTGA TERM 3233 2587363 - 2587337 - g 70 -8.6 -3.80625 | opp_overlap 2587347, overlap 2587331 2587321 GCGCGATAAGGCAAA CCTGCCACAGGG TTA CCGCGTCGCAGG GGGTAATCTCGGTTT Shewmr7_2185 2586246 - 2587433 + | aromatic amino acid transporter TERM 3234 2587786 - 2587804 + G 76 -11.6 -3.32844 | opp_overlap 2587765 CCGCAGCGCCAGATT CGGCGGCG CCC CGCCGCGG TTCTACACTCAAAAA TERM 3235 2588363 - 2588340 - g 72 -8.2 -3.91897 | opp_overlap 2588344, overlap 2588341 CTGGTGATGGATAAA CTCAGCCTGA ATCA TCAAGCTGAA TTAACCACAGCCTTT TERM 3236 2590000 - 2589977 - g 70 -9 -3.64822 | ACCCGCTGAGTTAAA TGTAACTGGT CATA ACCAATTACA GGCACAATTTAAGCT TERM 3237 2590572 - 2590602 + G 77 -9.6 -3.70919 | GTCTCGATCAGCGGC GGCCAACTGGCG GCCCGTG CGCCCGGTGGCC TTATTGCGATTTCAG Shewmr7_2186 2587692 - 2590892 + | hypothetical protein Shewmr7_2187 2590906 - 2591106 + | hypothetical protein Shewmr7_2188 2591131 - 2591481 + | hypothetical protein TERM 3238 2591487 - 2591534 + T 100 -13.6 -3.14564 | opp_overlap 2591494 2591496 2591502, overlap 2591494 2591496 2591502 TAAAAAGTAGAGAGT TAGCACAGACAAAAACGCCTGC AATC GCAGGCGTTTTTGTCTCTATCA TTGATAACGGAATGA TERM 3239 2591494 - 2591527 + T 100 -22.7 -3.02096 | opp_overlap 2591494 2591496 2591502, overlap 2591487 2591496 2591502 TAGAGAGTTAGCACA GACAAAAACGCCTGC AATC GCAGGCGTTTTTGTC TCTATCATTGATAAC TERM 3240 2591527 - 2591494 - T 100 -22.7 -2.82491 | opp_overlap 2591487 2591494 2591496 2591502, overlap 2591496 2591502 TAGAGAGTTAGCACA GACAAAAACGCCTGC AATC GCAGGCGTTTTTGTC TCTATCATTGATAAC TERM 3241 2591525 - 2591496 - T 100 -19.5 -2.95774 | opp_overlap 2591494 2591487 2591496 2591502, overlap 2591494 2591502 GAGAGTTAGCACAGA CAAAAACGCCTGC AATC GCAGGCGTTTTTG TCTCTATCATTGATA TERM 3242 2591496 - 2591525 + T 100 -19.5 -3.06361 | opp_overlap 2591496 2591494 2591502, overlap 2591494 2591487 2591502 GAGAGTTAGCACAGA CAAAAACGCCTGC AATC GCAGGCGTTTTTG TCTCTATCATTGATA TERM 3243 2591519 - 2591502 - T 100 -12.7 -5.05601 | opp_overlap 2591496 2591494 2591487 2591502, overlap 2591496 2591494 TAGCACAGACAAAAA CGCCTGC AATC GCAGGCG TTTTTGTCTCTATCA TERM 3244 2591502 - 2591519 + T 100 -12.7 -5.07275 | opp_overlap 2591502 2591496 2591494, overlap 2591496 2591494 2591487 TAGCACAGACAAAAA CGCCTGC AATC GCAGGCG TTTTTGTCTCTATCA Shewmr7_2189 2592393 - 2591608 - | peptidase S1 and S6, chymotrypsin/Hap TERM 3245 2591993 - 2591969 - G 75 -10.7 -3.44794 | opp_overlap 2591969 AACCCATGACCATAA TCGCCACGTCC GAC GAAGGTGGCGA TTTTGCCCGTTTCGG TERM 3246 2591969 - 2591993 + g 76 -8.5 -4.17089 | opp_overlap 2591969 AACCCATGACCATAA TCGCCACGTCC GAC GAAGGTGGCGA TTTTGCCCGTTTCGG TERM 3247 2592619 - 2592584 - R 100 -13.4 -4.38712 | opp_overlap 2592589, overlap 2592589 TTTATCCGTAGAAAA CAAAAGCGCAGCGAAC TTGT GTTCACCGCGCTTTTT AATATTTACCCCTAG TERM 3248 2592614 - 2592589 - R 100 -13.3 -5.18371 | opp_overlap 2592589, overlap 2592584 CCGTAGAAAACAAAA GCGCAGCGAAC TTGT GTTCACCGCGC TTTTTAATATTTACC TERM 3249 2592589 - 2592614 + r 100 -8.9 -4.93696 | opp_overlap 2592589 2592584 CCGTAGAAAACAAAA GCGCAGCGAAC TTGT GTTCACCGCGC TTTTTAATATTTACC Shewmr7_2190 2593522 - 2592683 - | carboxylesterase TERM 3250 2593636 - 2593590 - R 76 -8.1 -4.22338 | gap 1, opp_overlap 2593597, overlap 2593582 2593597 ATCACAAGCTTAAAA CACATAAGCAGCAGATAAGCCG TTAG CGG-TTATCTGCTGCTGTGATG GCAAACTGAGCGCTT TERM 3251 2593629 - 2593597 - R 100 -15.8 -3.83378 | gap 1, opp_overlap 2593597, overlap 2593582 2593590 GCTTAAAACACATAA GCAGCAGATAAGCCG TTAG CGG-TTATCTGCTGC TGTGATGGCAAACTG TERM 3252 2593597 - 2593629 + r 100 -15.8 -2.78596 | gap 1, opp_overlap 2593582 2593597 2593590 GCTTAAAACACATAA GCAGCAGATAAGCCG TTAG CGG-TTATCTGCTGC TGTGATGGCAAACTG Shewmr7_2191 2594789 - 2593650 - | alcohol dehydrogenase TERM 3253 2594725 - 2594754 + g 73 -9.1 -3.78329 | TCTTCAATCTTGAGC GGCTGTCCCGGCC CCCA GGCCACGGCGGCC TTTGACTTGATAAAC TERM 3254 2595222 - 2595208 - g 77 -11.4 -3.41222 | overlap 2595206 CGCCAACTGCAAACA GGCCTC GAG GAGGCC GAGCGGGCAATTACC Shewmr7_2192 2594986 - 2595867 + | LysR family transcriptional regulator Shewmr7_2193 2597244 - 2595955 - | FAD dependent oxidoreductase Shewmr7_2194 2597523 - 2598167 + | hypothetical protein TERM 3255 2598270 - 2598301 + G 83 -13.4 -3.30028 | opp_overlap 2598275, overlap 2598275 TAGAACAATGCTCGT TATAATTACTGTAT TTAT ATACAGTAATTATA TTGCTATGCGTGTTT TERM 3256 2598275 - 2598296 + G 73 -8.9 -3.73982 | opp_overlap 2598275, overlap 2598270 CAATGCTCGTTATAA TTACTGTAT TTAT ATACAGTAA TTATATTGCTATGCG Shewmr7_2195 2598262 - 2599086 + | putative prophage repressor TERM 3257 2599441 - 2599429 - g 73 -5.5 -4.62069 | TTCCCAGCTTAAAAA CGCAA GGA CTGCG TATCCGTCAAACCGT Shewmr7_2196 2599074 - 2600330 + | DNA-directed DNA polymerase TERM 3258 2600401 - 2600388 - T 70 -5.3 -4.48583 | AAGCAATAGAATAAA TCAGT AAAA ACTGA TGCTAGTACATAAAT TERM 3259 2600507 - 2600469 - T 82 -6.8 -4.84219 | gap 1, opp_overlap 2600469 AAACCATAAAATAAA GGGCTACAGTGGAGATT AATCGA AATCGTC-CTGTAGCCC TTCTGGTATGCGGTT TERM 3260 2600469 - 2600507 + T 73 -9 -3.47345 | gap 1, opp_overlap 2600469 AAACCATAAAATAAA GGGCTACAGTGGAGATT AATCGA AATCGTC-CTGTAGCCC TTCTGGTATGCGGTT Shewmr7_2197 2601533 - 2600598 - | hypothetical protein TERM 3261 2600923 - 2600911 - G 72 -4.1 -4.85599 | CCTACGGCATAAAAA CCATC AGG AATGG TGCCGGGAATAAAGT Shewmr7_2198 2602047 - 2601589 - | GCN5-related N-acetyltransferase TERM 3262 2602127 - 2602109 - R 100 -13.2 -4.77036 | opp_overlap 2602109 TCCTAGTATTAAAAA GCCAGAAC AGG GTTCTGGC TTTGGTAACAAGTTA TERM 3263 2602109 - 2602127 + r 100 -13.2 -3.737 | opp_overlap 2602109 TCCTAGTATTAAAAA GCCAGAAC AGG GTTCTGGC TTTGGTAACAAGTTA Shewmr7_2199 2604248 - 2602185 - | peptidase S9 prolyl oligopeptidase TERM 3264 2604283 - 2604262 - R 86 -11.7 -3.34517 | overlap 2604260 ATCTTTTGTTAAACA CATTCGGTA GTTG TACCGAATG AACGGTCAAAACGAT TERM 3265 2604346 - 2604381 + r 100 -10.4 -5.60993 | opp_overlap 2604348, overlap 2604348 CACTAACGAAACAAA AACGCTCAAGCAAGCC AAAA GGCGTACTTGAGCGTA TTTTTTTGTGACAAA TERM 3266 2604348 - 2604379 + r 100 -13 -4.45201 | opp_overlap 2604348, overlap 2604346 CTAACGAAACAAAAA CGCTCAAGCAAGCC AAAA GGCGTACTTGAGCG TATTTTTTTGTGACA TERM 3267 2604379 - 2604348 - R 100 -15.2 -5.38326 | opp_overlap 2604348 2604346 CTAACGAAACAAAAA CGCTCAAGCAAGCC AAAA GGCGTACTTGAGCG TATTTTTTTGTGACA Shewmr7_2200 2606055 - 2604511 - | fumarase TERM 3268 2605483 - 2605502 + g 76 -4.2 -5.00616 | gap 1, overlap 2605478 TGGAGGACACCAGCC CGC-GCCCA TCG TTGGCAGCG TTTTTTCAACCCAAG Shewmr7_2201 2606177 - 2607580 + | aminodeoxychorismate synthase, subunit I TERM 3269 2607717 - 2607696 - g 74 -10.1 -3.55444 | CTTGGATTGCGTAAA GCAGCGGTA CTCA TTCCGCTGC AGGAAATTCAAGGCG Shewmr7_2202 2607606 - 2608193 + | NUDIX hydrolase Shewmr7_2203 2608553 - 2608218 - | hypothetical protein asnC 2608705 - 2610105 + | asparaginyl-tRNA synthetase TERM 3270 2610149 - 2610136 - f 85 -9.5 -4.10925 | opp_overlap 2610136 ACAGATCCTTTAAAA CGCGC CTCG GCGCG TTTTTTATTGCCCAG TERM 3271 2610136 - 2610149 + F 100 -9.5 -5.4505 | opp_overlap 2610136 ACAGATCCTTTAAAA CGCGC CTCG GCGCG TTTTTTATTGCCCAG ddl 2610390 - 2611400 + | D-alanyl-alanine synthetase A TERM 3272 2611406 - 2611428 + T 100 -12 -5.10029 | opp_overlap 2611409, overlap 2611409 GGCTAAGTGATAAAC AAAGAGCGCC TAT GGCGCTCTTC TTTTTTGAGGTTAAT TERM 3273 2611409 - 2611425 + T 100 -13.7 -4.63993 | opp_overlap 2611409, overlap 2611406 TAAGTGATAAACAAA GAGCGCC TAT GGCGCTC TTCTTTTTTGAGGTT TERM 3274 2611425 - 2611409 - T 100 -13.7 -4.59089 | opp_overlap 2611409 2611406 TAAGTGATAAACAAA GAGCGCC TAT GGCGCTC TTCTTTTTTGAGGTT Shewmr7_2206 2613711 - 2611453 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3275 2611514 - 2611501 - G 78 -3.8 -5.1848 | AAGTAACTCAAAAAA TGCC GCCTTG GGCA TGGGCTTATAAAAGA TERM 3276 2611685 - 2611703 + g 76 -6.1 -4.6038 | opp_overlap 2611685 CCTTCATCCAATCTA TCGATAA AGCTC TTATCGA TTTTGATTTGATCTA TERM 3277 2613845 - 2613801 - R 100 -17.5 -4.7497 | opp_overlap 2613809 TTTAGGTATTAAAAA GCACTAAAGCAACTTTTCAAT TCG AATGAAAACTTGCTTTAGTGC GAGATATTACGAAGG Shewmr7_2207 2615076 - 2613862 - | Fmu (Sun) domain-containing protein TERM 3278 2613989 - 2613974 - G 70 -2.4 -5.00616 | TTTTCCGCTAAAAAA GCATCC ACTT GGCCGC GGTTTTCACAGGGGA TERM 3279 2615205 - 2615188 - R 100 -11.3 -5.4756 | opp_overlap 2615188 AAGTCCAATAAAAAA GCGATCC AAGG GGATCGC TTTTATCGAAATGGC TERM 3280 2615188 - 2615205 + r 100 -11.3 -4.38712 | opp_overlap 2615188 AAGTCCAATAAAAAA GCGATCC AAGG GGATCGC TTTTATCGAAATGGC Shewmr7_2208 2616500 - 2615229 - | glucose/galactose transporter Shewmr7_2209 2618248 - 2616626 - | alpha amylase, catalytic region TERM 3281 2617572 - 2617582 + g 82 -8.2 -4.47679 | opp_overlap 2617572 2617568 TCTTCACTAAATCCA CGCC CCT GGCG TTTATCTTTTGGCTT Shewmr7_2210 2618747 - 2621566 + | TonB-dependent receptor TERM 3282 2621577 - 2621609 + F 100 -16.5 -4.60487 | opp_overlap 2621582, overlap 2621582 TGTAAGTTGTCATCG TAAAAGCCTGCTTCA CTG TGAAGCAGGCTTTTC TTTTTACCCATAATA TERM 3283 2621582 - 2621604 + F 100 -16.4 -5.26119 | opp_overlap 2621582, overlap 2621577 GTTGTCATCGTAAAA GCCTGCTTCA CTG TGAAGCAGGC TTTTCTTTTTACCCA TERM 3284 2621604 - 2621582 - f 100 -16.4 -4.13767 | opp_overlap 2621577 2621582 GTTGTCATCGTAAAA GCCTGCTTCA CTG TGAAGCAGGC TTTTCTTTTTACCCA TERM 3285 2622560 - 2622549 - g 74 -7.2 -4.15453 | overlap 2622537 CAACTGACGCCAAAA CGGC TCCA GCCG CCAGTTCTACGAGCC Shewmr7_2211 2621696 - 2623693 + | alpha amylase, catalytic region TERM 3286 2623729 - 2623710 - f 72 -7.2 -3.94746 | overlap 2623712 CCATACTCAATCAAA CAGCTAAG CATG CTTAGCTA ACAGCGCGGCCAAAC TERM 3287 2623759 - 2623733 - f 95 -13.1 -3.08996 | gap 1 CATGCTTAGCTAACA GCGCGGCCAAAC TACA GTTTGGCCGC-C AAGTCAGTAAAGGAA Shewmr7_2212 2623781 - 2625910 + | alpha amylase, catalytic region TERM 3288 2625947 - 2625976 + F 100 -16.6 -5.00616 | AAATCATAGGTTAGC GCCAGAGTCACA CTTAGT TGTGACTCTGGC TTTTTTAAAACACAC Shewmr7_2213 2626029 - 2626412 + | glyoxalase/bleomycin resistance protein/dioxygenase Shewmr7_2214 2626622 - 2626831 + | hypothetical protein TERM 3289 2626936 - 2626926 - T 79 -6.8 -4.61873 | opp_overlap 2626925 2626926 TCTTAGAAATTAAAA CTGC TTT GCAG GTATTGGCTTATAGC Shewmr7_2215 2629081 - 2627387 - | hypothetical protein Shewmr7_2216 2629839 - 2629291 - | hypothetical protein Shewmr7_2217 2630178 - 2629858 - | hypothetical protein Shewmr7_2218 2631638 - 2630790 - | hypothetical protein TERM 3290 2631807 - 2631782 - R 100 -16.3 -4.07133 | opp_overlap 2631786, overlap 2631786 TAGGCTTAGAAACAA CAAAGCCGCAT CGGA ATGCGGCTTTG ACTTAGATAATGACG TERM 3291 2631803 - 2631786 - R 100 -11.3 -4.63048 | opp_overlap 2631786, overlap 2631782 CTTAGAAACAACAAA GCCGCAT CGGA ATGCGGC TTTGACTTAGATAAT TERM 3292 2631786 - 2631803 + r 95 -11.3 -3.77219 | opp_overlap 2631786 2631782 CTTAGAAACAACAAA GCCGCAT CGGA ATGCGGC TTTGACTTAGATAAT def 2632340 - 2631849 - | peptide deformylase Shewmr7_2220 2632533 - 2632991 + | methylated-DNA-(protein)-cysteine S-methyltransferase Shewmr7_2221 2633121 - 2633933 + | hypothetical protein TERM 3293 2634010 - 2634049 + T 100 -16 -3.74178 | gap 1, opp_overlap 2634010 2634017, overlap 2634017 CAACGCAGCACAAAA CACAAAAGGCCAAACGTAG TGA CTCCGTTTGGCCTTTT-TG TTTCAGATTTAATTC TERM 3294 2634049 - 2634010 - T 100 -16 -4.48741 | gap 1, opp_overlap 2634010 2634017, overlap 2634017 CAACGCAGCACAAAA CACAAAAGGCCAAACGTAG TGA CTCCGTTTGGCCTTTT-TG TTTCAGATTTAATTC TERM 3295 2634043 - 2634017 - T 100 -15.2 -4.94487 | opp_overlap 2634010 2634017, overlap 2634010 GCACAAAACACAAAA GGCCAAACGTAG TGA CTCCGTTTGGCC TTTTTGTTTCAGATT TERM 3296 2634017 - 2634043 + T 100 -15.2 -5.29846 | opp_overlap 2634017 2634010, overlap 2634010 GCACAAAACACAAAA GGCCAAACGTAG TGA CTCCGTTTGGCC TTTTTGTTTCAGATT Shewmr7_2222 2634876 - 2634097 - | glutamine amidotransferase, class-II TERM 3297 2635158 - 2635172 + G 70 -10 -3.1875 | overlap 2635156 CGCCATGATCTTAGT GCTAGG AGC CCTAGC TTACCTTCGGGTATC TERM 3298 2635626 - 2635603 - g 73 -8.9 -3.66803 | TGGCAATACCTGAAA GATCACGGC TTCTTC GCCATGATC ATCAAGAAAAAATAC fadE 2635120 - 2637567 + | acyl-CoA dehydrogenase TERM 3299 2637617 - 2637595 - T 100 -16.4 -4.90079 | opp_overlap 2637595, overlap 2637575 ATTTTAATAACAAAA GAGGCACTAC TAT GTAGTGCCTC TTTATTTACCAGCGT TERM 3300 2637595 - 2637617 + T 100 -16.4 -4.41616 | opp_overlap 2637575 2637595 ATTTTAATAACAAAA GAGGCACTAC TAT GTAGTGCCTC TTTATTTACCAGCGT Shewmr7_2224 2639667 - 2637646 - | sodium/hydrogen exchanger TERM 3301 2638574 - 2638564 - G 70 -3.2 -4.8269 | overlap 2638570 GATAATGATTAAAAA TACC AAG GGCA CAATGGCATCGGCGC TERM 3302 2640254 - 2640265 + r 75 -7.2 -4.37092 | opp_overlap 2640242 2640241 ATCCGCCCTATGTCA GGCG ATAA CGCC TTTTATACAAGAAGT Shewmr7_2225 2641177 - 2640470 - | TetR family transcriptional regulator TERM 3303 2641331 - 2641311 - g 74 -6.8 -4.30978 | GGCAACTTATCAAAA GCGGCAGA TAAAG TCTGTCGC ACACAATCAACCTTG TERM 3304 2641820 - 2641805 - g 74 -6.8 -4.42386 | gap 1, opp_overlap 2641805, overlap 2641806 2641807 GCTTTACCCAGAAAA CTGCCCG ATA CGGGC-G CAGGTATTTGCCAAC Shewmr7_2226 2641248 - 2642132 + | LysR family transcriptional regulator TERM 3305 2642193 - 2642156 - T 95 -12.9 -3.21695 | opp_overlap 2642148, overlap 2642161 TTATCACTAACCGAA TTGAACGTATGCCAACA TAAA TGTTGGCATACGTATAA GTAGGAAATGCCTTT TERM 3306 2642188 - 2642161 - T 100 -17.2 -3.21258 | opp_overlap 2642148, overlap 2642156 ACTAACCGAATTGAA CGTATGCCAACA TAAA TGTTGGCATACG TATAAGTAGGAAATG Shewmr7_2227 2643346 - 2642219 - | hypothetical protein Shewmr7_2228 2644675 - 2643431 - | hypothetical protein TERM 3307 2644886 - 2644860 - R 100 -10.2 -6.12458 | TAAAAAAATAAAAAA GCCCCTTAGTCA TAA TCACTAAAGGGC ACATAAGGCGAGGAT Shewmr7_2229 2645409 - 2645056 - | tetraheme cytochrome c Shewmr7_2230 2646956 - 2645436 - | flavocytochrome c TERM 3308 2647196 - 2647217 + r 100 -13.1 -4.4009 | opp_overlap 2647196 TAATTAAAATAAAAA TGGCAACAC TAAT GTGTTGCCA TTTTATAAAATAGAA TERM 3309 2647217 - 2647196 - R 100 -13.1 -5.54338 | opp_overlap 2647196 TAATTAAAATAAAAA TGGCAACAC TAAT GTGTTGCCA TTTTATAAAATAGAA Shewmr7_2231 2648250 - 2647270 - | alcohol dehydrogenase TERM 3310 2651163 - 2651183 + G 70 -8.4 -3.7732 | TACCGATCAATGCGT TGAAACTG GATCG CAGTTTCA TTATTCATATGGCCA Shewmr7_2232 2649320 - 2651413 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3311 2652071 - 2652033 - T 100 -18.4 -4.74917 | opp_overlap 2652040, overlap 2652040 ATTAAATAGATAAAA TCAAAAAGCCCATGCTAT TTA ATAGCATGGGCTTCATGA ATGTTGGCGGAGCGG TERM 3312 2652064 - 2652040 - T 100 -17.3 -5.15526 | opp_overlap 2652040, overlap 2652033 AGATAAAATCAAAAA GCCCATGCTAT TTA ATAGCATGGGC TTCATGAATGTTGGC TERM 3313 2652040 - 2652064 + T 100 -17.3 -3.2218 | opp_overlap 2652040 2652033 AGATAAAATCAAAAA GCCCATGCTAT TTA ATAGCATGGGC TTCATGAATGTTGGC TERM 3314 2652299 - 2652344 + T 86 -12.1 -3.12432 | gap 1, opp_overlap 2652307 2652309, overlap 2652309 TCCACTCAAGTTGCG GTGAATAATACGGTTGAGCGTT CGA AGCG-TCAACCGTTTTTTTCAC TCTATTGCATCGTTT TERM 3315 2652309 - 2652334 + T 100 -9.1 -5.51402 | gap 1, opp_overlap 2652309 2652307, overlap 2652299 TTGCGGTGAATAATA CGGTTGAGCGTT CGA AGCG-TCAACCG TTTTTTTCACTCTAT Shewmr7_2233 2653879 - 2652455 - | hypothetical protein TERM 3316 2652563 - 2652549 - G 74 -11.4 -3.10344 | GCCTCATCTAACATA CGCTGC TCT GCAGCG GCTAGCGCCTGCGCT Shewmr7_2234 2654741 - 2654013 - | DNA polymerase III, epsilon subunit Shewmr7_2235 2654812 - 2655288 + | ribonuclease H Shewmr7_2236 2656224 - 2655310 - | LysR family transcriptional regulator Shewmr7_2237 2656983 - 2656261 - | methyltransferase type 11 Shewmr7_2238 2657068 - 2657955 + | hydroxyacylglutathione hydrolase TERM 3317 2658764 - 2658751 - g 71 -5.3 -4.4648 | ACCTGTACGACAAAA CCAAT AATA ATTGG CTCTATGCGATTGCG Shewmr7_2239 2658207 - 2659754 + | MltD domain-containing protein TERM 3318 2659881 - 2659859 - T 100 -16.4 -5.29846 | opp_overlap 2659859 AATGGCAAACAAAAA GGCAGTAACC CTA GGTTACTGCC TTTTTCATTCGCAAA TERM 3319 2659859 - 2659881 + T 100 -16.4 -4.8622 | opp_overlap 2659859 AATGGCAAACAAAAA GGCAGTAACC CTA GGTTACTGCC TTTTTCATTCGCAAA Shewmr7_2240 2660642 - 2659983 - | intracellular proteinase inhibitor domain-containing protein Shewmr7_2241 2662465 - 2660645 - | AsmA family protein TERM 3320 2661675 - 2661686 + g 70 -2.2 -5.00895 | overlap 2661670 AACTTGCTGATGTCC GCAG ACAC TTGC TTTTTATCTAATGCG TERM 3321 2662308 - 2662298 - G 73 -3.2 -5.0133 | TACCGTGGGAAAAAA CGTC CAC GACA AGTCATCAGCAATGA Shewmr7_2242 2663002 - 2662508 - | ribonuclease activity regulator protein RraA Shewmr7_2243 2663223 - 2663543 + | hypothetical protein TERM 3322 2663722 - 2663688 - T 100 -11.6 -4.51238 | opp_overlap 2663694 2663697, overlap 2663690 TGGATAAAACACAAA TAGATATAAGGCGC TAACCCT GCGCCTTATATCTG GATGGTAGATTACTT TERM 3323 2663720 - 2663690 - T 100 -14.2 -3.85066 | opp_overlap 2663694 2663697, overlap 2663688 GATAAAACACAAATA GATATAAGGCGC TAACCCT GCGCCTTATATC TGGATGGTAGATTAC TERM 3324 2663694 - 2663716 + T 71 -9.2 -2.92463 | opp_overlap 2663690 2663688, overlap 2663697 AAACACAAATAGATA TAAGGCGC TAACCCT GCGCCTTA TATCTGGATGGTAGA Shewmr7_2244 2665522 - 2663732 - | hypothetical protein TERM 3325 2664549 - 2664561 + g 70 -3.3 -4.77165 | opp_overlap 2664549 AATTTATCAATCAAT TGGCG AAT CGCGA TTTTATTGTCGGCAG TERM 3326 2664749 - 2664760 + g 74 -2.2 -5.16572 | gap 1 ACCAATTCTAAAGCT G-CGG GCA CCGTC TTTTTTCAGTTGGCT TERM 3327 2666369 - 2666356 - g 82 -8.1 -4.58424 | TAGCATCATAGAAAA GCTGC CCGA GCAGC GACAAAATCTCTTAT TERM 3328 2666538 - 2666524 - g 84 -4.2 -5.24799 | opp_overlap 2666524, overlap 2666525 CGATAAAGATAAAAA GTCAGC GTT GCTGAG TCATTTGATCCAAGA Shewmr7_2245 2665835 - 2667298 + | DEAD/DEAH box helicase domain-containing protein TERM 3329 2667624 - 2667637 + G 82 -3.7 -5.28176 | CCGATGCACCGCACT CGGCG ACCG CGCAG TTTTTTATCAATACG Shewmr7_2246 2667344 - 2667844 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 3330 2667972 - 2668001 + T 95 -7.1 -5.47159 | opp_overlap 2667972 CCTAGAGAGAAAAAA GGAGCACTCAACC CAAT GGTTAGTTGCTCC TTTTTGTTTATTAAC TERM 3331 2668001 - 2667972 - T 95 -7.1 -5.4251 | opp_overlap 2667972 CCTAGAGAGAAAAAA GGAGCACTCAACC CAAT GGTTAGTTGCTCC TTTTTGTTTATTAAC Shewmr7_2247 2668528 - 2668070 - | hypothetical protein TERM 3332 2668552 - 2668538 - R 100 -8.5 -5.55769 | CTTCATAATAAAAAA CCCGC TTAAT GCGGG CCATTTTACACCAAT Shewmr7_2248 2669569 - 2668568 - | putative transglycosylase TERM 3333 2669367 - 2669377 + g 86 -6.8 -5.03747 | overlap 2669375 2669376 TGGCTTAGCGCTGCG GCCA CAT TGGC TTTTTTAAAGCGTTT Shewmr7_2249 2669872 - 2669594 - | hypothetical protein Shewmr7_2250 2669996 - 2670661 + | septum site-determining protein MinC Shewmr7_2251 2670689 - 2671498 + | septum site-determining protein MinD Shewmr7_2252 2671501 - 2671758 + | cell division topological specificity factor MinE TERM 3334 2671760 - 2671808 + T 70 -3.9 -4.89393 | gap 2, overlap 2671770 TGCCTGACAGATAAG TCG-AGC-GTTGGCGTCATCCTC ATCAC GGGGATGACGCTTTCTGCTGTGA TTTTTCTAGCATTTG TERM 3335 2671770 - 2671796 + T 100 -14.5 -4.04752 | overlap 2671760 ATAAGTCGAGCGTTG GCGTCATCCTC ATCAC GGGGATGACGC TTTCTGCTGTGATTT Shewmr7_2253 2673101 - 2671947 - | ribonuclease D TERM 3336 2673104 - 2673119 + r 86 -11.8 -3.1855 | opp_overlap 2673104 TCCATAAAAACAAAA GCCGGC TGAT GCCGGC TTCAATCTTACGCGC TERM 3337 2673119 - 2673104 - R 100 -11.8 -5.35224 | opp_overlap 2673104 TCCATAAAAACAAAA GCCGGC TGAT GCCGGC TTCAATCTTACGCGC Shewmr7_2254 2674800 - 2673127 - | long-chain-fatty-acid--CoA ligase TERM 3338 2673772 - 2673783 + g 72 -3.6 -4.83169 | GATGCTCTGCCATTT GTCG GCTA CGGC TTTTTGTACCGCCAT Shewmr7_2255 2675866 - 2675000 - | alpha/beta hydrolase fold Shewmr7_2256 2676700 - 2675888 - | hypothetical protein TERM 3339 2676582 - 2676606 + g 73 -10.7 -3.19178 | overlap 2676581 TAAATATCGCGGCTG GCGTTTTTCGC TTG GCGAAAGTCGC TCTTAATGGCTTTAT Shewmr7_2257 2677539 - 2676832 - | hypothetical protein Shewmr7_2258 2677840 - 2677532 - | hypothetical protein TERM 3340 2677906 - 2677938 + r 75 -8.5 -3.80893 | opp_overlap 2677903 2677906, overlap 2677907 AAGTACTTAACACTA GTGTCTGTATCAGTT TGC AGCCGATACAGACAG TTTAGATTCTAACGT TERM 3341 2677907 - 2677937 + r 83 -12 -2.88054 | opp_overlap 2677906 2677903, overlap 2677906 AGTACTTAACACTAG TGTCTGTATCAGTT TGC AGCCGATACAGACA GTTTAGATTCTAACG Shewmr7_2259 2678686 - 2677976 - | peptidase M22, glycoprotease TERM 3342 2678618 - 2678599 - G 70 -2.8 -4.77157 | CTAACTCAGCAAAAA CCTGTCCT TGAT AATACAGG GCAGCCGAACAAGCT Shewmr7_2260 2679036 - 2680034 + | delta-aminolevulinic acid dehydratase TERM 3343 2680092 - 2680063 - T 76 -10.8 -2.5664 | opp_overlap 2680068, overlap 2680068 CAGCCAAGCATTAAC GAAAACGCCACC CTAATC GGTGGCGTTTTT TATCCGTCATTTTGC TERM 3344 2680087 - 2680068 - T 100 -10.7 -4.47217 | opp_overlap 2680068, overlap 2680063 AAGCATTAACGAAAA CGCCACC CTAATC GGTGGCG TTTTTTATCCGTCAT TERM 3345 2680068 - 2680087 + T 100 -10.7 -5.28778 | opp_overlap 2680063 2680068 AAGCATTAACGAAAA CGCCACC CTAATC GGTGGCG TTTTTTATCCGTCAT Shewmr7_2261 2681026 - 2680121 - | bifunctional methionine sulfoxide reductase B/A protein TERM 3346 2681750 - 2681737 - g 74 -4.5 -4.77036 | GCCTACTATGAAAAA GCCAA TGCG CTGGC CTCTGAACTGTTAGA Shewmr7_2262 2681404 - 2682243 + | 2OG-Fe(II) oxygenase TERM 3347 2682309 - 2682296 - f 83 -9.5 -4.01419 | opp_overlap 2682296 GATTAAGCAATTAAA GCGCC TTCG GGCGC TTTTTTTATGACATT TERM 3348 2682296 - 2682309 + F 100 -9.5 -5.63504 | opp_overlap 2682296 GATTAAGCAATTAAA GCGCC TTCG GGCGC TTTTTTTATGACATT rbgA 2682380 - 2683321 + | ribosomal biogenesis GTPase TERM 3349 2683474 - 2683508 + T 100 -13 -3.73402 | opp_overlap 2683480, overlap 2683480 CATCCCTCAGGTTGA TGGAAAGCCAGCGC CATCTCA GCGCTGGCTTTTTA TTTGCTCCCACGTAT TERM 3350 2683480 - 2683502 + T 100 -12 -5.33405 | opp_overlap 2683480, overlap 2683474 TCAGGTTGATGGAAA GCCAGCGC CATCTCA GCGCTGGC TTTTTATTTGCTCCC TERM 3351 2683502 - 2683480 - T 100 -13.4 -3.65351 | opp_overlap 2683480 2683474 TCAGGTTGATGGAAA GCCAGCGCCA TCT CAGCGCTGGC TTTTTATTTGCTCCC Shewmr7_2264 2684075 - 2683635 - | hypothetical protein Shewmr7_2265 2685250 - 2684780 - | hypothetical protein TERM 3352 2685073 - 2685110 + g 76 -6.4 -4.63089 | gap 2, overlap 2685075 2685076 GTAGGGCTAACGAGT TTTGCT-CAACGG-TGCG GTCA CGCATCCGTTGTAGCGTA TTGTTTTTTGAGGTG TERM 3353 2685075 - 2685108 + g 75 -9 -3.91465 | gap 2, overlap 2685073 2685076 AGGGCTAACGAGTTT TGCT-CAACGG-TGCG GTCA CGCATCCGTTGTAGCG TATTGTTTTTTGAGG TERM 3354 2685076 - 2685107 + g 70 -10.3 -2.93795 | gap 2, overlap 2685075 2685073 GGGCTAACGAGTTTT GCT-CAACGG-TGCG GTCA CGCATCCGTTGTAGC GTATTGTTTTTTGAG Shewmr7_2266 2686314 - 2685811 - | protein tyrosine phosphatase Shewmr7_2267 2687357 - 2686335 - | hypothetical protein TERM 3355 2687097 - 2687087 - G 76 -6.8 -4.53703 | overlap 2687088 AAAACAATAGGAAAA TGGC TTT GCCA GCCAGCGTATGCCAA Shewmr7_2268 2688368 - 2687460 - | DNA ligase Shewmr7_2269 2688622 - 2688993 + | diacylglycerol kinase TERM 3356 2689103 - 2689128 + T 100 -14.1 -4.95155 | opp_overlap 2689103 TTCGATAAAAAAAAA CGCCTTTGGGA TCTC TCCTAAAGGCG TTTTTCTACTGTAGC TERM 3357 2689128 - 2689103 - T 100 -11.9 -6.22802 | opp_overlap 2689103 TTCGATAAAAAAAAA CGCCTTTGGGA TCTC TCCTAAAGGCG TTTTTCTACTGTAGC Shewmr7_2270 2690004 - 2689144 - | LysR family transcriptional regulator Shewmr7_2271 2690113 - 2690565 + | hypothetical protein TERM 3358 2691519 - 2691505 - g 86 -5.6 -5.22794 | ATAAGGATGAAAAAA GCCGCG AGC CACAGC AAGCTCAAGCGACAA Shewmr7_2272 2690586 - 2691596 + | alpha-L-glutamate ligase TERM 3359 2691632 - 2691657 + F 100 -14.1 -5.1861 | opp_overlap 2691630 CGCTAACATCATATC TGCGGCTCAGT CTCC ACTGAGTCGCA TTTTTTGGTCCTAGG Shewmr7_2273 2691848 - 2692771 + | hypothetical protein TERM 3360 2692793 - 2692808 + T 100 -10.4 -4.84529 | opp_overlap 2692793 GATAAGCATAAAAAA GGACGC CTTG GCGTCC TTTTTACATTTGTCA TERM 3361 2692808 - 2692793 - T 100 -10.4 -5.39755 | opp_overlap 2692793 GATAAGCATAAAAAA GGACGC CTTG GCGTCC TTTTTACATTTGTCA Shewmr7_2274 2694452 - 2692827 - | peptidase M28 TERM 3362 2693076 - 2693053 - G 70 -4.5 -4.63048 | CTCATAAATAACAAA CCTGGCACA CCTTGC TGGGCCAAG GCAAAGTGATCCGAT TERM 3363 2695056 - 2695068 + G 73 -3.4 -5.00616 | ATCCGAAAACATTCG CTCA AGTAC TGAG TTTTTTACCGCCCAA TERM 3364 2695219 - 2695238 + G 70 -9.2 -3.53279 | overlap 2695217 GCCGGCATGTTGGCT CAGGCGCC CGAG GGCACCTG TCTTATCTTTGTCGA Shewmr7_2275 2694613 - 2695638 + | diguanylate cyclase TERM 3365 2695674 - 2695648 - T 100 -17.4 -3.41636 | opp_overlap 2695648 2695651, overlap 2695651 AACTAATCCAAGCAA CAAGGCAGAGCC ATC AGCTCTGCCTTG TTTATCAGTCGATTG TERM 3366 2695648 - 2695674 + T 100 -16.7 -3.93583 | opp_overlap 2695648 2695651, overlap 2695651 AACTAATCCAAGCAA CAAGGCAGAGC CATCA GCTCTGCCTTG TTTATCAGTCGATTG TERM 3367 2695671 - 2695651 - T 100 -13.3 -3.83675 | opp_overlap 2695651 2695648, overlap 2695648 TAATCCAAGCAACAA GGCAGAGCC ATC AGCTCTGCC TTGTTTATCAGTCGA TERM 3368 2695651 - 2695671 + T 100 -12.6 -4.09117 | opp_overlap 2695648 2695651, overlap 2695648 TAATCCAAGCAACAA GGCAGAGC CATCA GCTCTGCC TTGTTTATCAGTCGA Shewmr7_2276 2696403 - 2695762 - | sortase family protein Shewmr7_2277 2698722 - 2696455 - | vault protein inter-alpha-trypsin subunit TERM 3369 2697077 - 2697095 + g 78 -3.8 -5.16237 | overlap 2697080 ACCGGATACTGGATT TTGGCTAG CAA CTGGCTGA TTTTTTGCTCCACTT TERM 3370 2697835 - 2697858 + g 74 -4.4 -4.75372 | overlap 2697838 GGGCACGCGATTGGC CAAGGCCGCC GTCA GTTGGCCCTG TTTTTCATCAATCCT Shewmr7_2278 2699562 - 2698768 - | OmpA/MotB domain-containing protein TERM 3371 2699380 - 2699349 - G 80 -12.2 -3.38564 | gap 1 TAAATCCACCGATAA TGGCGCCAACG-GGG CCT CCCACGAGGGCGCCA AGTAACGCTCCGCCG Shewmr7_2279 2699808 - 2700500 + | two component transcriptional regulator TERM 3372 2701790 - 2701752 - g 74 -7.5 -4.15044 | opp_overlap 2701734, overlap 2701755 TGGTGGCCGAAGAAA CCA-CCCACGGTATTCGCA CCC TGCGTA-ACCGTGCGCTGG AAAAACTGTTTAACG TERM 3373 2702231 - 2702191 - g 82 -10.3 -3.94634 | overlap 2702193 CATGATTTTAAACAA CATGAGTGAGGCAACGCGC CTT GAGCAGAGCCTCACTCAGG CCGATGTGGCTAAGT TERM 3374 2702229 - 2702193 - g 79 -11.5 -3.55946 | overlap 2702191 TGATTTTAAACAACA TGAGTGAGGCAACGCGC CTT GAGCAGAGCCTCACTCA GGCCGATGTGGCTAA Shewmr7_2280 2700533 - 2702692 + | periplasmic sensor signal transduction histidine kinase TERM 3375 2703081 - 2703097 + G 71 -5 -4.46576 | TATCCCTCAGGTGCA GCGGCG ATTAG CGCGGC TTTGTTATCGTTTTT TERM 3376 2703510 - 2703523 + G 76 -8.1 -4.20367 | opp_overlap 2703497 AAGCACTGGCCGCAG CTGCG TGAA CGCAG TTATTTATTGGGGCA TERM 3377 2703635 - 2703620 - g 74 -4 -4.93296 | gap 1 GCAGCATGAGAAAAA TGCC-CT TAA AGTGGCA AACTGGTTGAAAACT Shewmr7_2281 2702817 - 2704016 + | cystathionine beta-lyase TERM 3378 2704068 - 2704043 - T 71 -6.8 -4.20148 | opp_overlap 2704043 2704044, overlap 2704044 ATTATGTGAAAACAA CGAAGGCGGG AACTTA CTCGCCTTCA TTTTGCCCCGGCTTC TERM 3379 2704043 - 2704068 + T 71 -6.8 -4.08692 | opp_overlap 2704043 2704044, overlap 2704044 ATTATGTGAAAACAA CGAAGGCGGG AACTTA CTCGCCTTCA TTTTGCCCCGGCTTC TERM 3380 2704044 - 2704067 + T 76 -10.3 -3.04894 | opp_overlap 2704043 2704044, overlap 2704043 TTATGTGAAAACAAC GAAGGCGGG AACTTA CTCGCCTTC ATTTTGCCCCGGCTT Shewmr7_2282 2704660 - 2704145 - | CreA family protein Shewmr7_2283 2706124 - 2704670 - | putative chaperone TERM 3381 2705920 - 2705930 + g 70 -8.2 -3.66018 | opp_overlap 2705904, overlap 2705919 GGGCGCGGCTCAATT GCGC AGC GCGC TTCTTGGCATAATCC TERM 3382 2706825 - 2706797 - g 79 -7.5 -4.54681 | opp_overlap 2706820 ATCAACGAAAAACAA TTAAGCGAGTTCC ACA GTAACTGGCTTAA AAAGCATTTTCGCGA TERM 3383 2707425 - 2707400 - g 80 -4.5 -5.0925 | opp_overlap 2707402, overlap 2707401 2707402 2707416 CTCGAAAACGAAAAA TTGCCCGCGCT CAAT AGCTCGGGCTT TGGCCGCAGCGCCAA TERM 3384 2707423 - 2707402 - g 71 -11.5 -2.77595 | opp_overlap 2707402, overlap 2707401 2707400 2707416 CGAAAACGAAAAATT GCCCGCGCT CAAT AGCTCGGGC TTTGGCCGCAGCGCC TERM 3385 2707402 - 2707423 + G 79 -11.5 -3.53012 | opp_overlap 2707401 2707400 2707402 2707416 CGAAAACGAAAAATT GCCCGCGCT CAAT AGCTCGGGC TTTGGCCGCAGCGCC Shewmr7_2284 2706449 - 2708611 + | polyphosphate kinase TERM 3386 2708618 - 2708603 - f 82 -10.4 -3.65313 | opp_overlap 2708603 GAATTACAGGCCAAA GCCAGC TAAT GCTGGC TTTATCATCGTCTCG TERM 3387 2708603 - 2708618 + F 89 -10.4 -4.00782 | opp_overlap 2708603 GAATTACAGGCCAAA GCCAGC TAAT GCTGGC TTTATCATCGTCTCG Shewmr7_2285 2708654 - 2710210 + | Ppx/GppA phosphatase Shewmr7_2286 2711159 - 2710290 - | Ion transport protein Shewmr7_2287 2711317 - 2711832 + | hypothetical protein TERM 3388 2711865 - 2711882 + F 100 -8.4 -5.4659 | opp_overlap 2711865 CCCTATGCGACGCAA CGCCCA GTCAAA TGGGCG TTTTTATTTGTATTC Shewmr7_2288 2711917 - 2712531 + | hypothetical protein Shewmr7_2289 2712760 - 2713020 + | hypothetical protein TERM 3389 2713062 - 2713038 - T 100 -20.1 -5.19879 | opp_overlap 2713040 GCTCAAACATAAAAA CAGGGCGCCAA TCA TTGGCGCCCTG TGTGGAAATAAGAGT TERM 3390 2713040 - 2713060 + T 100 -16.9 -2.88544 | opp_overlap 2713038 TCAAACATAAAAACA GGGCGCCAA TCA TTGGCGCCC TGTGTGGAAATAAGA Shewmr7_2290 2714010 - 2713090 - | peptidase M23B TERM 3391 2713381 - 2713363 - G 73 -5.2 -4.63218 | overlap 2713365 2713367 GCCGCCCGAATAAAA CATATCGG GAA CCGACAGG CTAATCACGCCATCG TERM 3392 2713598 - 2713624 + g 73 -10.8 -3.30452 | overlap 2713617 GCCGTATCTTTAGCC GCTCGCTCCTGT GCC ACGGGATCGGGC TTCATGATCTTATTG TERM 3393 2714061 - 2714037 - R 100 -15.9 -3.96216 | opp_overlap 2714040, overlap 2714040 TCCTTATTCAAACAA TAACGCCCTAA AGA TTAGGGCGTTA TAAAAAAATCGACTG TERM 3394 2714058 - 2714040 - R 100 -13.2 -4.10744 | opp_overlap 2714040, overlap 2714037 TTATTCAAACAATAA CGCCCTAA AGA TTAGGGCG TTATAAAAAAATCGA TERM 3395 2714040 - 2714058 + r 100 -13.2 -3.29511 | opp_overlap 2714037 2714040 TTATTCAAACAATAA CGCCCTAA AGA TTAGGGCG TTATAAAAAAATCGA Shewmr7_2291 2714954 - 2714079 - | hypothetical protein Shewmr7_2292 2715536 - 2716537 + | cytochrome-c peroxidase TERM 3396 2716614 - 2716581 - T 74 -8.1 -4.07568 | opp_overlap 2716583 2716587, overlap 2716587 CGCTTTCGCGCAAAA GTTAAAGGCCGAGGA TTAA TCCTCGGCCTTTGTG TTTAATGCTTGATGC TERM 3397 2716583 - 2716612 + T 100 -17.3 -3.51124 | opp_overlap 2716581 2716587, overlap 2716587 CTTTCGCGCAAAAGT TAAAGGCCGAGGA TTAA TCCTCGGCCTTTG TGTTTAATGCTTGAT TERM 3398 2716608 - 2716587 - T 100 -15.9 -3.92659 | opp_overlap 2716587 2716583, overlap 2716581 CGCGCAAAAGTTAAA GGCCGAGGA TTAA TCCTCGGCC TTTGTGTTTAATGCT TERM 3399 2716587 - 2716608 + T 100 -15.9 -4.37506 | opp_overlap 2716581 2716587, overlap 2716583 CGCGCAAAAGTTAAA GGCCGAGGA TTAA TCCTCGGCC TTTGTGTTTAATGCT Shewmr7_2293 2717704 - 2716676 - | nucleoid-associated protein NdpA Shewmr7_2294 2717782 - 2718000 + | hypothetical protein TERM 3400 2718120 - 2718084 - g 78 -3.7 -5.08824 | overlap 2718089 GGTCGAGCGAAAAAA GCAAATGAGCCGCGA TCGCGTG TCACGACTCATCAAC TGGGGACATTGGTTC TERM 3401 2718115 - 2718089 - g 76 -6.6 -4.43669 | overlap 2718084 AGCGAAAAAAGCAAA TGAGCCGCGA TCGCGTG TCACGACTCA TCAACTGGGGACATT Shewmr7_2295 2718067 - 2719857 + | sulfatase TERM 3402 2719970 - 2719930 - T 100 -13.5 -3.47349 | opp_overlap 2719940, overlap 2719940 GCGTTAAAGCGAGAA TAAACAAAAAGCCCCACCT TAA ACGTGGGGCTTTTTATTTG GCGAACAACTCACTT TERM 3403 2719960 - 2719940 - T 100 -11.1 -5.50774 | opp_overlap 2719940, overlap 2719930 GAGAATAAACAAAAA GCCCCACCT TAA ACGTGGGGC TTTTTATTTGGCGAA TERM 3404 2719940 - 2719960 + T 100 -11.1 -5.27335 | opp_overlap 2719930 2719940 GAGAATAAACAAAAA GCCCCACCT TAA ACGTGGGGC TTTTTATTTGGCGAA Shewmr7_2296 2721097 - 2719985 - | NADH:flavin oxidoreductase/NADH oxidase TERM 3405 2720833 - 2720844 + g 70 -4.4 -4.72272 | CGCCAGAATCTTTAA TTGC CGTG GCAA TTTTTGCTAAGCCCG TERM 3406 2721456 - 2721442 - g 70 -2.8 -4.82667 | overlap 2721443 CGATTACAGCAAAAA CTCATC CAA GATGAT GCCCATATTGGCGAA Shewmr7_2297 2721199 - 2722065 + | LysR family transcriptional regulator Shewmr7_2298 2722248 - 2723186 + | diguanylate cyclase Shewmr7_2299 2724054 - 2723389 - | transcriptional regulator NarL Shewmr7_2300 2725816 - 2724047 - | nitrate/nitrite sensor protein NarX TERM 3407 2724175 - 2724197 + g 71 -6.4 -4.28487 | TTTTTGCACGATCAT TCATTATAGA TAT TCCATAATGA TTTACTTTTGTCATA TERM 3408 2727435 - 2727413 - g 95 -12 -4.41494 | CAGGCCCAAGTAAAA GCAGCAACAG ATA CTGCTGCCGC ATTAGGGTTTATCTC Shewmr7_2301 2726219 - 2727637 + | nitrite transporter TERM 3409 2727648 - 2727699 + F 100 -22.8 -3.10894 | opp_overlap 2727664, overlap 2727664 TTTAGTGATTTGATT GTTGTATGAATAAAAACGGTTTGC CTAG GCAAACCGTTTTTATTCATACGAG TTAAATGATGATGCT TERM 3410 2727664 - 2727683 + F 100 -12.2 -5.1356 | opp_overlap 2727664, overlap 2727648 TTGTATGAATAAAAA CGGTTTGC CTAG GCAAACCG TTTTTATTCATACGA TERM 3411 2727683 - 2727664 - f 100 -12.2 -5.1356 | opp_overlap 2727664 2727648 TTGTATGAATAAAAA CGGTTTGC CTAG GCAAACCG TTTTTATTCATACGA TERM 3412 2729807 - 2729796 - g 74 -2.2 -5.06414 | GTCGGCCAAGAAAAA CTGC GCCC GCAA ACGGGTTGGCAGCCA TERM 3413 2729864 - 2729876 + G 70 -3.3 -4.85599 | ACCTCCACGTCATAT GAACG GCA CGTCC TTTTTCTACAATCAC Shewmr7_2302 2728044 - 2731808 + | respiratory nitrate reductase alpha subunit apoprotein Shewmr7_2303 2731811 - 2733349 + | respiratory nitrate reductase beta subunit Shewmr7_2304 2733355 - 2734065 + | respiratory nitrate reductase chaperone NarJ Shewmr7_2305 2734068 - 2734751 + | respiratory nitrate reductase gamma subunit TERM 3414 2734767 - 2734787 + T 100 -12.6 -3.737 | opp_overlap 2734767 GTTCTAAATAATAAA GCCACCTG TTTTT CAGGTGGC TTTGATACGACATTC TERM 3415 2734787 - 2734767 - T 100 -12.6 -4.56978 | opp_overlap 2734767 GTTCTAAATAATAAA GCCACCTG TTTTT CAGGTGGC TTTGATACGACATTC Shewmr7_2307 2736502 - 2735546 - | hypothetical protein TERM 3416 2737142 - 2737163 + r 100 -14.5 -4.4768 | opp_overlap 2737142 AAGCCAAAATAAAAA GAGCCCATC GATT GATGGGCTC TTTATTATATTAATC TERM 3417 2737163 - 2737142 - R 100 -14.5 -5.49568 | opp_overlap 2737142 AAGCCAAAATAAAAA GAGCCCATC GATT GATGGGCTC TTTATTATATTAATC Shewmr7_2308 2740081 - 2737193 - | hypothetical protein TERM 3418 2740141 - 2740174 + r 77 -3.9 -5.22039 | opp_overlap 2740150, overlap 2740148 2740150 GTCGCTAAAGAGTTC CAACAACAAGCCTTA TAAG TAAGGCTATTTCTTG TTTTTTACCTTTACA TERM 3419 2740148 - 2740167 + r 74 -5 -4.84182 | opp_overlap 2740150, overlap 2740141 2740150 AAGAGTTCCAACAAC AAGCCTTA TAAG TAAGGCTA TTTCTTGTTTTTTAC TERM 3420 2740165 - 2740150 - R 74 -7.6 -3.95324 | opp_overlap 2740148 2740141 2740150 GAGTTCCAACAACAA GCCTTA TAAG TAAGGC TATTTCTTGTTTTTT TERM 3421 2740150 - 2740165 + r 74 -7.6 -3.99602 | opp_overlap 2740150, overlap 2740148 2740141 GAGTTCCAACAACAA GCCTTA TAAG TAAGGC TATTTCTTGTTTTTT Shewmr7_2309 2740995 - 2740165 - | peptidoglycan-binding LysM Shewmr7_2310 2742076 - 2740997 - | hypothetical protein TERM 3422 2741273 - 2741289 + g 83 -5.2 -5.09204 | overlap 2741271 TAAAGAATAATCTTT TGAAGT ATCAA ACTTCA TTTTTATTCCAGTAT Shewmr7_2311 2742793 - 2742080 - | hypothetical protein TERM 3423 2742151 - 2742188 + g 82 -3.7 -5.28826 | gap 1, overlap 2742154 ATACCGTGACATTGA GATCTTT-ATTTACTAAG CCT TTTGGTAAATCAAAGCTC TTTTTTCTACCCTTT Shewmr7_2312 2745560 - 2742795 - | hypothetical protein TERM 3424 2743447 - 2743469 + g 76 -4.2 -5.0538 | gap 1 GTCATAGGAATAACC GTCT-GGTC GTTGTA GACCGAGAC TTTTTTCAACTGGCC TERM 3425 2744456 - 2744466 + g 74 -4 -4.98531 | CATCTTCTTGCTCTT TATC GAT GATA TTTTTGCTTTCAAGC Shewmr7_2313 2746749 - 2746168 - | hypothetical protein Shewmr7_2314 2747492 - 2748274 + | diguanylate phosphodiesterase TERM 3426 2748647 - 2748608 - f 78 -10.2 -3.32562 | gap 1, opp_overlap 2748615, overlap 2748598 2748615 AGAAATGTTCTACAA TCAGAAACGTCGGCACACT AAG AATGTGCC-ACGTTTACGA CTTTAAACTCCAACC TERM 3427 2748640 - 2748615 - f 83 -9.1 -4.1021 | gap 1, opp_overlap 2748615, overlap 2748608 2748598 TTCTACAATCAGAAA CGTCGGCACACT AAG AATGTGCC-ACG TTTACGACTTTAAAC TERM 3428 2749002 - 2748976 - f 79 -3.1 -5.27769 | gap 2, overlap 2748970 ATAAAAAAGCAAAAA CCCG-C-TTTAGC TGT GCTAAATAACGGG CTTCTGGTTTCGCTT TERM 3429 2749994 - 2750008 + G 74 -4.3 -4.78077 | CGAACCATGAGTTCA CAGAT CAGCT ATCTG TTTATTTTAATTACC Shewmr7_2315 2749475 - 2751655 + | diguanylate cyclase Shewmr7_2316 2753118 - 2751652 - | hypothetical protein TERM 3430 2752187 - 2752170 - G 83 -12.7 -3.53012 | CGGCGGCGCTCGAAA CCGTCGC ATCG GCGACGG ATTGAAAAGTGAGTA TERM 3431 2752859 - 2752869 + g 74 -4 -5.01732 | ACGGGCGAGGCATCT GTTT GCG AAAC TTTTTTGAGGACCTT Shewmr7_2317 2753283 - 2753789 + | hypothetical protein TERM 3432 2753910 - 2753938 + T 75 -10.4 -2.79823 | opp_overlap 2753916, overlap 2753916 TAAGCATTCGCACAT AAAAAAGCACCC AACCA GGGTGCTTTTTC GTTAATTTTCAGACG TERM 3433 2753932 - 2753916 - T 100 -9.4 -5.36441 | opp_overlap 2753910 2753916 TTCGCACATAAAAAA GCACCC AACCA GGGTGC TTTTTCGTTAATTTT TERM 3434 2753916 - 2753932 + T 100 -9.4 -4.97312 | opp_overlap 2753916, overlap 2753910 TTCGCACATAAAAAA GCACCC AACCA GGGTGC TTTTTCGTTAATTTT nadE 2754858 - 2753968 - | NAD synthetase TERM 3435 2754252 - 2754233 - G 76 -7 -4.44046 | TTGAGGCCAAATAAA GGCGCCAG ATCG CAGGCACC ATCGCCCCATTTAGT TERM 3436 2754522 - 2754540 + g 74 -4.5 -4.82855 | overlap 2754518 2754524 TAAATTGGCAAGCTT GCTGAGC TTCGT GCTCATC TTTTTGAATTTGATA TERM 3437 2754689 - 2754705 + g 78 -10.1 -3.87149 | AGGACCAAGGCTTTG CTGCGGG CTG CCTGCAG TTTAGATTTAATAAA TERM 3438 2754989 - 2754950 - R 100 -17.4 -4.56597 | opp_overlap 2754953 2754956, overlap 2754953 CGTCTGTTCCAAAAA CAATAAGGGCAATAACGG TTTG CCGCTATTGCCCTTATTT ACTTAAACCTATGTA TERM 3439 2754953 - 2754986 + r 100 -16.9 -3.91352 | opp_overlap 2754953 2754950, overlap 2754956 CTGTTCCAAAAACAA TAAGGGCAATAACGG TTTG CCGCTATTGCCCTTA TTTACTTAAACCTAT TERM 3440 2754986 - 2754953 - R 100 -19.1 -4.40561 | opp_overlap 2754953 2754956, overlap 2754950 CTGTTCCAAAAACAA TAAGGGCAATAACGG TTTG CCGCTATTGCCCTTA TTTACTTAAACCTAT TERM 3441 2754956 - 2754983 + r 100 -14.2 -4.0825 | opp_overlap 2754953 2754950, overlap 2754953 TTCCAAAAACAATAA GGGCAATAACGG TTTG CCGCTATTGCCC TTATTTACTTAAACC Shewmr7_2319 2756312 - 2755008 - | inosine-guanosine kinase TERM 3442 2755252 - 2755264 + g 73 -6.3 -4.52589 | CCATCACCTGCACCG TTGGT GTT ACCAA TTTTCTCTGGGCCGC TERM 3443 2756051 - 2756064 + g 72 -3.8 -4.88918 | overlap 2756058 CGCCCGCAAACTCAT CGCT GATCAA AGCG TTTTGTTTCAGCTCG Shewmr7_2320 2757549 - 2756503 - | ferrochelatase TERM 3444 2757376 - 2757360 - G 77 -8.7 -4.08216 | TTATCCCCTGCAAAA TCGGCTG CCA CAGCCAA GGGGACAAATCGACG TERM 3445 2757569 - 2757584 + r 100 -10.4 -4.79223 | opp_overlap 2757569 TCGCCAATAAAAAAA GCCTGC AATA GCAGGC TTTTTCCTAATATGA TERM 3446 2757584 - 2757569 - R 100 -10.4 -5.7946 | opp_overlap 2757569 TCGCCAATAAAAAAA GCCTGC AATA GCAGGC TTTTTCCTAATATGA Shewmr7_2321 2758273 - 2757629 - | adenylate kinase Shewmr7_2322 2759278 - 2758415 - | thioredoxin domain-containing protein TERM 3447 2759142 - 2759121 - G 71 -5.1 -4.46212 | gap 1, overlap 2759122 TTCGCCAGCACAAAA CGGCCA-GCA TGC TGCGCGGCCA GTTGCTCGAGTGTTT TERM 3448 2759393 - 2759352 - R 72 -7.4 -4.07568 | gap 2, opp_overlap 2759353 2759354 2759356 2759357, overlap 2759357 TCGCGCTGCCTAAAA CGGAATCGGGGCACTTGTGT CTCG ACCCAAGTGCCCCGAAT--G TCTTACTTCAGGTTC TERM 3449 2759353 - 2759395 + r 89 -12.1 -3.37612 | gap 1, opp_overlap 2759352 2759357, overlap 2759354 2759356 2759357 CGCGCTGCCTAAAAC GG-AATCGGGGCACTTGTGT CTCG ACCCAAGTGCCCCGAATGTC TTACTTCAGGTTCGC TERM 3450 2759354 - 2759393 + r 100 -13.6 -3.25539 | opp_overlap 2759352 2759357, overlap 2759353 2759356 2759357 GCGCTGCCTAAAACG GAATCGGGGCACTTGTGT CTCG ACCCAAGTGCCCCGAATG TCTTACTTCAGGTTC TERM 3451 2759356 - 2759391 + r 100 -16.2 -3.18634 | opp_overlap 2759352 2759357, overlap 2759354 2759353 2759357 GCTGCCTAAAACGGA ATCGGGGCACTTGTGT CTCG ACCCAAGTGCCCCGAA TGTCTTACTTCAGGT TERM 3452 2759390 - 2759357 - R 100 -19.7 -3.36823 | opp_overlap 2759357 2759356 2759354 2759353, overlap 2759352 CTGCCTAAAACGGAA TCGGGGCACTTGTGT CTCG ACCCAAGTGCCCCGA ATGTCTTACTTCAGG TERM 3453 2759357 - 2759390 + r 100 -19.7 -2.50699 | opp_overlap 2759352 2759357, overlap 2759356 2759354 2759353 CTGCCTAAAACGGAA TCGGGGCACTTGTGT CTCG ACCCAAGTGCCCCGA ATGTCTTACTTCAGG Shewmr7_2323 2761309 - 2759396 - | heat shock protein 90 TERM 3454 2760609 - 2760633 + g 73 -2.7 -5.04385 | overlap 2760611 GCCTTGTTCATGACC TTCCAGTAACC TTC GGTAGCGGGGA TTTTTTCACCGTCTG TERM 3455 2760964 - 2760986 + g 86 -8.4 -4.59853 | CGATCAGCTGCGAGT CCTTTGAGGC TTC GCCTGAGAGG TTTTTGAAGAATTCG TERM 3456 2761577 - 2761555 - R 100 -10.5 -5.54907 | opp_overlap 2761555 GCCATAAAATAAAAA CCCGCGAGC ACAGG GCTGGCGGG TTTACTCTTTAGGCC TERM 3457 2761555 - 2761577 + r 89 -10.5 -4.00532 | opp_overlap 2761555 GCCATAAAATAAAAA CCCGCGAGC ACAGG GCTGGCGGG TTTACTCTTTAGGCC Shewmr7_2324 2762200 - 2761601 - | DNA replication and repair protein RecR Shewmr7_2325 2762548 - 2762213 - | hypothetical protein Shewmr7_2326 2765850 - 2762713 - | DNA polymerase III, subunits gamma and tau TERM 3458 2764600 - 2764616 + g 100 -3.6 -6.06723 | AGCCTGTGAGTCACG CTCAGC GGTTA GCGGAG TTTTTTTTTCAGCCA TERM 3459 2765906 - 2765893 - R 81 -5.2 -5.24129 | opp_overlap 2765898 TGTTGGTACAAAAAA GGGG ATCGCG CCCC GAGATAGTTGCAAGA Shewmr7_2327 2766531 - 2765980 - | adenine phosphoribosyltransferase TERM 3460 2766605 - 2766585 - R 100 -11.2 -5.26119 | opp_overlap 2766583 GCGGTAAAAACAAAA CGTCCACA GCGAG TGTGGACG AGCTTTAATAATTCG Shewmr7_2328 2767081 - 2766713 - | hypothetical protein TERM 3461 2767148 - 2767132 - R 100 -12.3 -5.27023 | ACCTGAAAAACAAAA GCCACTC AAA GAGTGGC CAGTAGTATACTCAA Shewmr7_2329 2767304 - 2767182 - | hypothetical protein Shewmr7_2330 2768201 - 2767461 - | hypothetical protein TERM 3462 2767705 - 2767689 - G 87 -4.3 -5.51402 | ATAGAGGCAAAAAAA CACCGGC TGT GGCAGTG GCGCTGTCGGGCGAT TERM 3463 2768032 - 2768002 - G 78 -3.9 -5.08824 | gap 1 TGTTGACTGAAAAAA GCC-TGCACTAAGG CTTG CCACTGTGCATGGC TATAAAGACTTTTAA Shewmr7_2331 2769040 - 2768201 - | hypothetical protein TERM 3464 2769137 - 2769120 - R 100 -12.7 -4.41616 | ATGCTGCTAAACAAA GGCCAGC TGAG GCTGGCC AAGTGTAGAGCTGAA Shewmr7_2332 2769606 - 2769175 - | hypothetical protein TERM 3465 2770115 - 2770105 - g 74 -8.2 -4.09685 | CTGCATGGCCGAAAA CGCG ATG CGCG CGATTGAGCTTGGCT Shewmr7_2333 2769866 - 2770813 + | dihydrouridine synthase, DuS TERM 3466 2770874 - 2770848 - f 79 -3 -5.27923 | TAATCCCATAAAAAA GTGGTGAATT TTTAGGT AAACCACCAC TTAATCCCTATAAAT Shewmr7_2334 2770977 - 2771336 + | TraR/DksA family transcriptional regulator TERM 3467 2771625 - 2771610 - T 100 -10.4 -5.68023 | opp_overlap 2771610 2771621 2771624 CTATAAGCAAAAAAA CCTCCG CAAG CGGAGG TTTGGGTTATCCAGG TERM 3468 2771610 - 2771625 + T 86 -10.4 -3.80625 | opp_overlap 2771610, overlap 2771621 2771624 CTATAAGCAAAAAAA CCTCCG CAAG CGGAGG TTTGGGTTATCCAGG Shewmr7_2335 2774301 - 2771653 - | TonB-dependent receptor TERM 3469 2774711 - 2774686 - R 100 -14.9 -4.18674 | opp_overlap 2774686 2774689, overlap 2774689 GCGAGATATAAATAA TAATGCCACTC AAAA GAGTGGCATTA TTGGATCAAACATTA TERM 3470 2774686 - 2774711 + r 100 -14.9 -3.06133 | opp_overlap 2774686 2774689, overlap 2774689 GCGAGATATAAATAA TAATGCCACTC AAAA GAGTGGCATTA TTGGATCAAACATTA TERM 3471 2774689 - 2774708 + r 93 -12.2 -3.67597 | opp_overlap 2774686 2774689, overlap 2774686 AGATATAAATAATAA TGCCACTC AAAA GAGTGGCA TTATTGGATCAAACA TERM 3472 2774708 - 2774689 - R 100 -12.2 -4.19887 | opp_overlap 2774689 2774686, overlap 2774686 AGATATAAATAATAA TGCCACTC AAAA GAGTGGCA TTATTGGATCAAACA ushA 2776471 - 2774750 - | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor Shewmr7_2337 2777501 - 2776836 - | carboxylesterase Shewmr7_2338 2777780 - 2777553 - | hypothetical protein Shewmr7_2339 2778167 - 2780095 + | peptidase M1, membrane alanine aminopeptidase TERM 3473 2780273 - 2780302 + T 100 -12.3 -4.05245 | opp_overlap 2780278, overlap 2780278 AAGCATTAGCGCACA AAAAAGCCCAAAC CTAG GTTTGGGCTTTTG TTTACTTATCTGGTC TERM 3474 2780278 - 2780297 + T 100 -12.2 -5.02357 | opp_overlap 2780278, overlap 2780273 TTAGCGCACAAAAAA GCCCAAAC CTAG GTTTGGGC TTTTGTTTACTTATC TERM 3475 2780297 - 2780278 - T 100 -12.2 -5.26316 | opp_overlap 2780278 2780273 TTAGCGCACAAAAAA GCCCAAAC CTAG GTTTGGGC TTTTGTTTACTTATC Shewmr7_2340 2780860 - 2780372 - | peptidylprolyl isomerase, FKBP-type Shewmr7_2341 2782343 - 2781069 - | lytic murein transglycosylase TERM 3476 2781953 - 2781971 + g 76 -3 -5.08824 | overlap 2781955 2781956 ATTCCTGCGCCAATT TATCGAGC AGC GCGCGGTG TTTTTTCAGTAAACG TERM 3477 2782697 - 2782686 - H 75 -3 -5.1615 | CCAACAGCGAAAAAA TCTT AGCA AAGA ATCCCTTGGACTATC TERM 3478 2782840 - 2782817 - g 79 -8.2 -4.31549 | GAAAACGTAAAAGAA CATCAAACAC TCTG GGGTTTGATG GATGAAACTGGCGAA Shewmr7_2342 2782766 - 2783125 + | hypothetical protein Shewmr7_2343 2783183 - 2783824 + | hypothetical protein Shewmr7_2344 2784870 - 2783926 - | response regulator receiver modulated CheW protein TERM 3479 2784014 - 2784001 - G 76 -6.7 -4.43877 | opp_overlap 2784003, overlap 2784003 GAACTTCGAAATAAA TCGGT CGCA ACCGA CCTTCTCCACCATCG Shewmr7_2345 2785686 - 2785072 - | methyltransferase type 11 Shewmr7_2346 2785783 - 2786340 + | peptidase S16, lon domain-containing protein Shewmr7_2347 2786457 - 2787125 + | ECF subfamily RNA polymerase sigma-24 factor Shewmr7_2348 2787118 - 2787813 + | anti-ECFsigma factor, ChrR TERM 3480 2787892 - 2787927 + F 74 -6.3 -4.47259 | gap 1, overlap 2787919 ATACCAACAAGCCTT TTCCCGCTGAGTAA AAAATAAAC TTGC-CAGCGGGAA TTTTGCTGTTATACT Shewmr7_2349 2788338 - 2788520 + | hypothetical protein TERM 3481 2788664 - 2788714 + F 74 -9.9 -3.15407 | opp_overlap 2788662, overlap 2788662 2788660 TCGATATGACGAACT CGTTTGGTTCAGCCAGTATCT AACTCACAC AGATACATGCTGAGCCAAATG TGTATTCCTAATCTA Shewmr7_2350 2788796 - 2789056 + | hypothetical protein Shewmr7_2351 2790037 - 2789060 - | hypothetical protein Shewmr7_2352 2790293 - 2790700 + | hypothetical protein Shewmr7_2353 2791625 - 2790789 - | alpha/beta hydrolase fold Shewmr7_2354 2792650 - 2791625 - | zinc carboxypeptidase-related protein Shewmr7_2355 2793509 - 2792757 - | ABC transporter Shewmr7_2356 2793760 - 2794026 + | integral membrane protein TerC TERM 3482 2794075 - 2794048 - T 100 -15 -4.70659 | opp_overlap 2794048 2794052, overlap 2794052 GCGCACAGCTAAAAA GAAACCCAAGCC ATCG GACTTGGGTTTC TTCTTAATGCACCTT TERM 3483 2794048 - 2794075 + T 100 -13.6 -3.72592 | gap 1, opp_overlap 2794048 2794052, overlap 2794052 GCGCACAGCTAAAAA GAAACCCAAG-CC ATC GGACTTGGGTTTC TTCTTAATGCACCTT TERM 3484 2794071 - 2794052 - T 100 -10 -4.89966 | opp_overlap 2794052 2794048, overlap 2794048 ACAGCTAAAAAGAAA CCCAAGCC ATCG GACTTGGG TTTCTTCTTAATGCA TERM 3485 2794052 - 2794071 + T 87 -8.6 -4.48713 | gap 1, opp_overlap 2794048 2794052, overlap 2794048 ACAGCTAAAAAGAAA CCCAAG-CC ATC GGACTTGGG TTTCTTCTTAATGCA Shewmr7_2357 2795801 - 2794089 - | acyl-CoA synthetase TERM 3486 2795102 - 2795120 + g 79 -8.8 -4.13945 | opp_overlap 2795112 TATTCAGGATGTTGT GGTGCGAT AAG GTCGCGCC TTTTGGGCTACCCGT Shewmr7_2358 2796309 - 2795929 - | hypothetical protein Shewmr7_2359 2796596 - 2797057 + | hypothetical protein Shewmr7_2360 2797138 - 2797470 + | hypothetical protein TERM 3487 2797493 - 2797522 + T 85 -9.4 -4.21408 | TTACAAACCGCTTCC TGCGCACACT TAACCCGCAT AGTGTGCGCA TTTGCTTTTAGGATT Shewmr7_2361 2798330 - 2797536 - | hypothetical protein TERM 3488 2798166 - 2798154 - G 86 -6.9 -5.03145 | overlap 2798156 TAACTTGCCAAAAAA GCCCG ATT CAGGC TCGGAGCCATCACCC Shewmr7_2362 2799406 - 2798492 - | LysR family transcriptional regulator TERM 3489 2800073 - 2800053 - g 71 -6.1 -4.31293 | CTAGAGATCAAGAAA TGGGACTAC TTA GTGATCCCA CGCGGCACCACACAT Shewmr7_2363 2799621 - 2800781 + | homogentisate 1,2-dioxygenase TERM 3490 2801057 - 2801023 - g 73 -3 -4.95854 | overlap 2801027 2801029 GAAAAAAGCCAAAAA TAAAGACATTTTGT ACTACAA ACAAAATGACATTA ACTTCCTGCTCAATA TERM 3491 2801053 - 2801027 - g 74 -3.8 -4.92828 | overlap 2801023 2801029 AAAGCCAAAAATAAA GACATTTTGT ACTACAA ACAAAATGAC ATTAACTTCCTGCTC Shewmr7_2364 2800895 - 2801935 + | 4-hydroxyphenylpyruvate dioxygenase TERM 3492 2801964 - 2801982 + T 100 -14.6 -5.40625 | opp_overlap 2801964 TGTTATAAGAAAAAA CGGTACGC ACT GCGTACCG TTTTTTATGTCCTAT TERM 3493 2801982 - 2801964 - T 100 -14.6 -5.55769 | opp_overlap 2801964 TGTTATAAGAAAAAA CGGTACGC ACT GCGTACCG TTTTTTATGTCCTAT Shewmr7_2365 2803531 - 2802128 - | diguanylate cyclase TERM 3494 2802443 - 2802424 - G 73 -10.8 -3.23216 | GGCTATGATTATGAA TCAGCTGT GCCA ACAGCTGA ATAACCCTATCGCCT TERM 3495 2803135 - 2803124 - G 76 -5.8 -4.62069 | GCTTGAGGCGAAAAA GGGA ATGA TCCC CGCCACCACCACAAA Shewmr7_2366 2804263 - 2803700 - | maltose O-acetyltransferase TERM 3496 2804532 - 2804546 + H 73 -5.7 -4.42238 | opp_overlap 2804531 TGCTATTTGACACAT TGGCT AACTC AGCCA TTTTCATTACACTAG Shewmr7_2367 2804596 - 2805219 + | lysine exporter protein LysE/YggA Shewmr7_2368 2806528 - 2805332 - | hypothetical protein TERM 3497 2806489 - 2806473 - G 71 -6.5 -4.16259 | overlap 2806464 ATACAAGCAGACAAA CTCTGCT CTA AGCTGAG TAAATAGGCATGCTG Shewmr7_2369 2806707 - 2808446 + | gamma-glutamyltransferase 1 TERM 3498 2808623 - 2808593 - T 70 -7.7 -3.61715 | gap 1, opp_overlap 2808593 TAGCCGGTTCAACAA GCCCTTC-TATACA CCAC TGTATACGCAGGGC TTTTTACTCTTTGAG TERM 3499 2808593 - 2808623 + T 95 -7.7 -4.93696 | gap 1, opp_overlap 2808593 TAGCCGGTTCAACAA GCCCTTC-TATACA CCAC TGTATACGCAGGGC TTTTTACTCTTTGAG Shewmr7_2370 2810064 - 2809759 - | hypothetical protein TERM 3500 2810173 - 2810162 - R 85 -7.2 -4.88736 | opp_overlap 2810162, overlap 2810152 TACCATCTAGAAAAA CGCG CATG CGCG TTTTCTAAACCTATT TERM 3501 2810162 - 2810173 + r 75 -7.2 -4.39828 | opp_overlap 2810152 2810162 TACCATCTAGAAAAA CGCG CATG CGCG TTTTCTAAACCTATT TERM 3502 2810521 - 2810483 - R 75 -8.3 -3.84246 | gap 1, opp_overlap 2810486 2810489, overlap 2810485 2810486 2810489 GTTTTAACGATTAAA TAG-TAATGGCGGCTATT TCGG ATTAGCCGCCATTATCTT ATAAACCGATGAGTC TERM 3503 2810518 - 2810485 - R 83 -11.1 -3.50722 | opp_overlap 2810486 2810489, overlap 2810483 2810486 2810489 TTTAACGATTAAATA GTAATGGCGGCTATT TCGG ATTAGCCGCCATTAT CTTATAAACCGATGA TERM 3504 2810517 - 2810486 - R 100 -14.6 -2.69951 | opp_overlap 2810486 2810489, overlap 2810485 2810483 2810489 TTAACGATTAAATAG TAATGGCGGCTATT TCGG ATTAGCCGCCATTA TCTTATAAACCGATG TERM 3505 2810486 - 2810517 + r 100 -14.6 -3.21593 | opp_overlap 2810486 2810485 2810483 2810489, overlap 2810489 TTAACGATTAAATAG TAATGGCGGCTATT TCGG ATTAGCCGCCATTA TCTTATAAACCGATG TERM 3506 2810514 - 2810489 - R 91 -11.9 -3.48671 | opp_overlap 2810489 2810486, overlap 2810486 2810485 2810483 ACGATTAAATAGTAA TGGCGGCTATT TCGG ATTAGCCGCCA TTATCTTATAAACCG TERM 3507 2810489 - 2810514 + r 100 -11.9 -3.7511 | opp_overlap 2810486 2810485 2810483 2810489, overlap 2810486 ACGATTAAATAGTAA TGGCGGCTATT TCGG ATTAGCCGCCA TTATCTTATAAACCG Shewmr7_2371 2812213 - 2810612 - | hypothetical protein TERM 3508 2811131 - 2811158 + g 87 -7.7 -5.03145 | CCCCACTAACTCATT CATGGCGGC GACGGTTAAA GCCGCCGTG TTTTTTGGCCAATTG TERM 3509 2812839 - 2812857 + G 71 -7.4 -4.09243 | opp_overlap 2812841 GCCTACCTTCGCCAA TACCATCG AAG CGATGGAA TTTTCGGGCGATCTC TERM 3510 2813786 - 2813770 - g 71 -6.5 -4.16279 | opp_overlap 2813760 GACAGCACCCTAAAA GGCGTGT TCT ACACGGC CAATCGCCTCTATGG Shewmr7_2372 2812486 - 2814714 + | peptidyl-dipeptidase Dcp TERM 3511 2814769 - 2814751 - T 100 -14.6 -5.186 | opp_overlap 2814751 CAAAAGAGATAAAAA TGGGGAGC TAA GCTCCCCA TTTTATTGCGCGTAG TERM 3512 2814751 - 2814769 + T 100 -14.6 -4.64676 | opp_overlap 2814751 CAAAAGAGATAAAAA TGGGGAGC TAA GCTCCCCA TTTTATTGCGCGTAG Shewmr7_2373 2815311 - 2814814 - | GCN5-related N-acetyltransferase Shewmr7_2374 2815894 - 2815346 - | nitroreductase TERM 3513 2815549 - 2815569 + g 80 -10.4 -3.78775 | CTTGCTGCATCGCCA TCGTGGCG CAGCC CGCCGCGA TTTGCTGCTCAAGCA TERM 3514 2815992 - 2815975 - R 89 -7 -5.30686 | AAGAGGTACAAAAAA TCCCAC GCAAAG GTGGGA TTGAAAGTGTTGCAA Shewmr7_2375 2816616 - 2816023 - | DoxX family protein TERM 3515 2816677 - 2816690 + r 70 -3.7 -4.75174 | overlap 2816658 CGGGATTAATCTTTC GCGGC TTTT GCCAC TTTTTCAATTCCCTC Shewmr7_2376 2817539 - 2816667 - | hypothetical protein Shewmr7_2377 2818953 - 2817649 - | aminoglycoside phosphotransferase TERM 3516 2818923 - 2818893 - G 79 -11.8 -3.24747 | opp_overlap 2818892 2818889 GGCTGATATCAGTAA GCCCTGCCTGCGCT AAT ACCGCAAGCAGCGC ATCCTTGTCCTGCCC Shewmr7_2378 2819709 - 2819044 - | nicotinamide mononucleotide transporter PnuC Shewmr7_2379 2820038 - 2819778 - | hypothetical protein TERM 3517 2820111 - 2820072 - R 74 -9.3 -3.29013 | gap 1, opp_overlap 2820068 2820073, overlap 2820067 ATGCTAATAATGCAA TCGTCAGGCTGTG-GCGC AATGA GCGAGCACAGCCTGACAT CTGATGTATCATTCT TERM 3518 2820073 - 2820110 + r 76 -10.6 -2.90685 | gap 1, opp_overlap 2820072 2820067, overlap 2820068 TGCTAATAATGCAAT CGTCAGGCTGTG-GCGC AATGA GCGAGCACAGCCTGACA TCTGATGTATCATTC Shewmr7_2380 2822380 - 2820134 - | TonB-dependent receptor TERM 3519 2822613 - 2822585 - R 93 -13.3 -2.76087 | opp_overlap 2822591, overlap 2822591 AAGACACTTTGAAAT GAAAAATGCCAGC ATT GCTGGCATTTTTT GGCTTAATGGCCGTT TERM 3520 2822607 - 2822591 - R 100 -12.3 -4.98531 | opp_overlap 2822591, overlap 2822585 CTTTGAAATGAAAAA TGCCAGC ATT GCTGGCA TTTTTTGGCTTAATG TERM 3521 2822591 - 2822607 + r 100 -12.3 -5.17576 | opp_overlap 2822585 2822591 CTTTGAAATGAAAAA TGCCAGC ATT GCTGGCA TTTTTTGGCTTAATG Shewmr7_2381 2823102 - 2822710 - | hypothetical protein Shewmr7_2382 2823697 - 2823233 - | thioesterase superfamily protein Shewmr7_2383 2824211 - 2823684 - | hypothetical protein TERM 3522 2823809 - 2823784 - G 79 -7.5 -4.45083 | opp_overlap 2823793, overlap 2823786 2823787 CTGATACGCATAAAA GAGCCCACCGC ATGG GCGATAGGATC ATCGATGCTGTCCTG Shewmr7_2384 2824564 - 2824208 - | histidine triad (HIT) protein Shewmr7_2385 2824710 - 2826476 + | peptidase M61 domain-containing protein TERM 3523 2826510 - 2826546 + T 100 -11.8 -4.88895 | gap 1, opp_overlap 2826515, overlap 2826515 TTAACCCATAAAGCA CA-AAAGGGGCAATCGT ATCG ACGATTGCCCCTTTCTA TTTGTTTCTTTGTTT TERM 3524 2826515 - 2826540 + T 100 -17.7 -4.52349 | opp_overlap 2826515, overlap 2826510 CCATAAAGCACAAAA GGGGCAATCGT ATCG ACGATTGCCCC TTTCTATTTGTTTCT TERM 3525 2826540 - 2826515 - T 100 -17.7 -4.64846 | opp_overlap 2826515 2826510 CCATAAAGCACAAAA GGGGCAATCGT ATCG ACGATTGCCCC TTTCTATTTGTTTCT Shewmr7_2386 2827237 - 2826602 - | LuxR family transcriptional regulator Shewmr7_2387 2827533 - 2828279 + | cytochrome B561 TERM 3526 2828302 - 2828319 + T 100 -12.7 -5.61596 | opp_overlap 2828302 AATGAACATAAAAAA CGCCAGC GATC GCTGGCG TTTTTTTATAAAGCT TERM 3527 2828319 - 2828302 - T 100 -12.7 -5.50925 | opp_overlap 2828302 AATGAACATAAAAAA CGCCAGC GATC GCTGGCG TTTTTTTATAAAGCT Shewmr7_2388 2828701 - 2828351 - | cytochrome c3 TERM 3528 2828980 - 2829012 + H 79 -10.8 -2.9914 | opp_overlap 2828988, overlap 2828988 AAAGAAAAGCCCCAA TAAAAAAAGGAGAC GCTAG GTCTCCTTTTTTGA TCTATGTGACCCGTC TERM 3529 2828988 - 2829004 + H 100 -8 -5.25893 | opp_overlap 2828988, overlap 2828980 GCCCCAATAAAAAAA GGAGAC GCTAG GTCTCC TTTTTTGATCTATGT TERM 3530 2829004 - 2828988 - H 100 -8 -5.7946 | opp_overlap 2828988 2828980 GCCCCAATAAAAAAA GGAGAC GCTAG GTCTCC TTTTTTGATCTATGT TERM 3531 2830285 - 2830253 - g 100 -18.7 -3.63744 | opp_overlap 2830258, overlap 2830258 TTTGGCCTTAAAATA CAAAACGCTCGATGA GGT TCATCGAGCGTTTTA GGTGGAAATAAGTGT TERM 3532 2830280 - 2830258 - g 100 -16.4 -4.89567 | opp_overlap 2830258, overlap 2830253 CCTTAAAATACAAAA CGCTCGATGA GGT TCATCGAGCG TTTTAGGTGGAAATA TERM 3533 2830258 - 2830280 + G 100 -16.4 -4.18494 | opp_overlap 2830253 2830258 CCTTAAAATACAAAA CGCTCGATGA GGT TCATCGAGCG TTTTAGGTGGAAATA Shewmr7_2390 2829564 - 2830286 + | integrase catalytic subunit Shewmr7_2391 2832268 - 2830346 - | AMP-dependent synthetase and ligase TERM 3534 2830442 - 2830458 + g 71 -7.3 -4.12188 | CGCTGGCGCCGTATA TTGCTGA TTA TCGGCAA TTTTACGCATAGTGC TERM 3535 2832412 - 2832437 + H 72 -7.7 -3.78419 | gap 1, overlap 2832413 2832431 TTGTTCGCCGAGCTT G-CTGTGTGGAA TGT TTCCACATAGTC TTATGTCTTTAATGG TERM 3536 2832413 - 2832435 + H 89 -11.4 -3.46611 | overlap 2832412 2832431 TGTTCGCCGAGCTTG CTGTGTGGAA TGT TTCCACATAG TCTTATGTCTTTAAT Shewmr7_2392 2832480 - 2834162 + | peptidoglycan binding domain-containing protein TERM 3537 2834507 - 2834517 + G 71 -5.4 -4.56597 | opp_overlap 2834514 TTTGATATCACGACC CGAA GCA TTCG TTTTTACGAAGACCA Shewmr7_2393 2834435 - 2834839 + | MerR family transcriptional regulator Shewmr7_2394 2834993 - 2836162 + | isovaleryl-CoA dehydrogenase TERM 3538 2836216 - 2836171 - f 79 -11.2 -3.17492 | gap 2, overlap 2836163 GAAATAATCAGCCAA GGGCGAGAGGCGCATGACGAGC TTTA GCCTTTCATGC-CC-CTCGCCC ACCGAGCTAACTGAT TERM 3539 2836970 - 2836941 - g 79 -11.3 -3.62597 | GCGACCGGTGAAGAA GTCAGCGCCGAAG AACT CGGCGGCGCCGAC GTACACACTAAAATT TERM 3540 2837698 - 2837688 - g 70 -3.2 -4.77036 | GCTGAGGATGAAAAA GCCT TTA AAGC ACCGATTATTGCCCA Shewmr7_2395 2836263 - 2837870 + | propionyl-CoA carboxylase TERM 3541 2838676 - 2838660 - g 70 -11.5 -2.66964 | opp_overlap 2838672, overlap 2838657 CGATTGATTACACCA GCGAGCG CAT CGCCCGC ATTCGGGTATCTGAT Shewmr7_2396 2837915 - 2838775 + | methylglutaconyl-CoA hydratase TERM 3542 2838928 - 2838903 - g 76 -5.3 -4.84359 | overlap 2838904 CGATGCCGATAAAAA TGCCCGCCATG TTGC CATGGCCGACG AATCGTTTTACTTAG TERM 3543 2838927 - 2838904 - g 70 -8.8 -3.50133 | overlap 2838903 GATGCCGATAAAAAT GCCCGCCATG TTGC CATGGCCGAC GAATCGTTTTACTTA TERM 3544 2839252 - 2839241 - g 76 -5.8 -4.62471 | CCGAAGCCTTAAAAA TCGG CTTC CCGA TGCTGATTAAAGCCG TERM 3545 2840719 - 2840694 - g 71 -10.5 -3.16217 | opp_overlap 2840694 2840696 2840714, overlap 2840685 2840692 2840696 GATGAAGATGGAATA CACCATCGAAG CGCC CTTCGACGGTA TTGTTACCGAGTTCT TERM 3546 2840717 - 2840696 - g 71 -10.9 -3.136 | opp_overlap 2840694 2840696 2840714, overlap 2840685 2840694 2840692 TGAAGATGGAATACA CCATCGAAG CGCC CTTCGACGG TATTGTTACCGAGTT Shewmr7_2397 2838775 - 2840814 + | 3-methylcrotonoyl-CoA carboxylase, alpha subunit Shewmr7_2398 2840815 - 2841762 + | hydroxymethylglutaryl-CoA lyase TERM 3547 2842177 - 2842159 - g 74 -3.7 -5.00616 | opp_overlap 2842160 2842173, overlap 2842160 CGCTGGCGGAAAAAA TCCGCGC GGGCG GCGCAGG TATTCCAGCATTCTT Shewmr7_2399 2841831 - 2842535 + | 3-oxoacid CoA-transferase, A subunit TERM 3548 2842870 - 2842888 + G 70 -2.3 -4.91109 | CAAACAAACCGTTAC CGCGGTA AAAGG TGCCTCG TTTTTCTCCTCCGCC Shewmr7_2400 2842646 - 2843302 + | butyryl-CoA:acetate CoA transferase TERM 3549 2843414 - 2843434 + T 100 -11.2 -5.24551 | opp_overlap 2843414 TTTTAGTTTTAAAAA GCCCAGAA GATGA TTCTGGGC TTTTTATTGCTTTGC TERM 3550 2843434 - 2843414 - T 100 -11.2 -4.59773 | opp_overlap 2843414 TTTTAGTTTTAAAAA GCCCAGAA GATGA TTCTGGGC TTTTTATTGCTTTGC Shewmr7_2401 2844344 - 2843772 - | hypothetical protein TERM 3551 2844496 - 2844466 - R 72 -9.9 -2.80821 | gap 1, opp_overlap 2844476, overlap 2844476 CTGCCAAATACACCA TCTGGAAAAACGCG CATG CGCGT-TTTCCAAA CCTATTAACTAAAAT TERM 3552 2844487 - 2844476 - R 81 -7.2 -4.60487 | opp_overlap 2844476, overlap 2844466 CACCATCTGGAAAAA CGCG CATG CGCG TTTTCCAAACCTATT TERM 3553 2844476 - 2844487 + r 73 -7.2 -4.09511 | opp_overlap 2844466 2844476 CACCATCTGGAAAAA CGCG CATG CGCG TTTTCCAAACCTATT TERM 3554 2844815 - 2844827 + r 78 -10.5 -3.39844 | overlap 2844814 CAACAGTGACCGTTG GCGGC ATG GCCGC TCTTTCACATCTAAC Shewmr7_2402 2846260 - 2845283 - | hypothetical protein TERM 3555 2846190 - 2846180 - G 73 -3.2 -4.9725 | overlap 2846181 2846184 ATCGCCACATAAAAA TGCA CGG CGCA CCACGCGGCTACAAC Shewmr7_2403 2847131 - 2846424 - | putative lipoprotein Shewmr7_2404 2847726 - 2848328 + | ThiJ/PfpI domain-containing protein Shewmr7_2405 2848360 - 2848671 + | hypothetical protein TERM 3556 2849057 - 2849071 + G 71 -7.8 -4.07687 | overlap 2849058 GCTCCCCGGCTACCT TGCCAG TGC CTGGCG TTTTCGAAAAGAGAT TERM 3557 2849587 - 2849599 + G 70 -3.3 -4.85396 | ATCGCATTCCCCAAT CTCTG TTG CGGGG TTTTATTGTGCTTGT Shewmr7_2406 2848896 - 2849651 + | hypothetical protein TERM 3558 2849968 - 2849953 - g 74 -7.6 -4.16943 | opp_overlap 2849940 GGTCATATGGCAAAA GCCAAT GGTC ATTGGC AGCAGCTCGATGGTC Shewmr7_2407 2849725 - 2850408 + | negative transcriptional regulator TERM 3559 2850686 - 2850653 - T 72 -7.6 -3.76952 | gap 1 TTTATGCAAGGCAAA GTCCGTGTAGTGTAG TTATT CTACA-TAAACGGAC GATAACGCGGCAGAA TERM 3560 2851176 - 2851139 - T 100 -17.3 -3.66999 | opp_overlap 2851144, overlap 2851144 AGTGATTTAGCCAAA TAAAATAGGCGCTTAAG TGAA CTTAAGCGCCTATTTTG GCTAAGTGTTCGCGT TERM 3561 2851144 - 2851171 + T 100 -17.2 -4.20932 | opp_overlap 2851139 2851144 TTTAGCCAAATAAAA TAGGCGCTTAAG TGAA CTTAAGCGCCTA TTTTGGCTAAGTGTT TERM 3562 2851171 - 2851144 - T 100 -17.2 -4.90778 | opp_overlap 2851144, overlap 2851139 TTTAGCCAAATAAAA TAGGCGCTTAAG TGAA CTTAAGCGCCTA TTTTGGCTAAGTGTT Shewmr7_2409 2854291 - 2851196 - | acriflavin resistance protein Shewmr7_2410 2855370 - 2854288 - | RND family efflux transporter MFP subunit TERM 3563 2855719 - 2855679 - R 74 -10.6 -2.72379 | gap 1, opp_overlap 2855687 2855692, overlap 2855692 GCAATCTTGGAATGA CAGGCATAAAAAAGGGCGA TAAA TCGCCCTTTTGT-TGACTG AGGTAGGATTAACGC TERM 3564 2855687 - 2855712 + r 76 -10.5 -3.06796 | opp_overlap 2855679 2855692, overlap 2855692 GGAATGACAGGCATA AAAAAGGGCGA TAAA TCGCCCTTTTG TTGACTGAGGTAGGA TERM 3565 2855692 - 2855707 + r 100 -10.4 -4.67982 | opp_overlap 2855679 2855692, overlap 2855687 GACAGGCATAAAAAA GGGCGA TAAA TCGCCC TTTTGTTGACTGAGG TERM 3566 2855707 - 2855692 - R 100 -10.4 -5.29782 | opp_overlap 2855692 2855687, overlap 2855679 GACAGGCATAAAAAA GGGCGA TAAA TCGCCC TTTTGTTGACTGAGG Shewmr7_2411 2856825 - 2855728 - | NlpB/DapX family lipoprotein TERM 3567 2856270 - 2856250 - G 80 -9.7 -4.08767 | opp_overlap 2856242 TTTACCGTCGTAAAA CTCTTGGTG TTC CACCAAGTG AATAACGATGTTGGC Shewmr7_2412 2857713 - 2856829 - | dihydrodipicolinate synthase TERM 3568 2857559 - 2857611 + g 79 -12 -3.20382 | ACGTGCTCATTCATT GGCAGAGTCGCTGAC-TCGCCTGTGG TAC CCAC-GGCGACGATGGCGTCTGTGCC TTGGTCAATATGGAA Shewmr7_2413 2857885 - 2858436 + | amino acid-binding ACT domain-containing protein bcp 2858440 - 2858907 + | thioredoxin-dependent thiol peroxidase TERM 3569 2858999 - 2858983 - T 100 -9.4 -4.81851 | opp_overlap 2858983 AGTTAAACGCAAAAA GGCCCT TTATC AGGGCC TTTTTTTATGAAAAA TERM 3570 2858983 - 2858999 + T 100 -9.4 -5.60993 | opp_overlap 2858983 AGTTAAACGCAAAAA GGCCCT TTATC AGGGCC TTTTTTTATGAAAAA Shewmr7_2415 2859702 - 2859088 - | lysine exporter protein LysE/YggA TERM 3571 2859480 - 2859469 - G 74 -3.6 -5.01811 | GTACCAAATCAAAAA GGCG GCTC CACC AAAACTGGCCACATG TERM 3572 2860505 - 2860518 + G 70 -2.3 -5.00884 | TGGCAACACAGCATT CCCTC ATCG GAGAG TTTTTTAGAGGCGAT TERM 3573 2860596 - 2860580 - g 71 -6.6 -4.24204 | opp_overlap 2860579 CACTTACAGGCAAAA CCTTTG ATAGA CAAAGG CATATTGATTGAGCT Shewmr7_2416 2859815 - 2860732 + | chromosome replication initiation inhibitor protein TERM 3574 2860777 - 2860794 + T 73 -2.6 -5.10064 | opp_overlap 2860777, overlap 2860771 TAGTGGATAAAAAAA CTGAGC ACTCTG GCCCAG TTTTTATCTATTAAC TERM 3575 2860794 - 2860777 - T 91 -4.8 -5.626 | opp_overlap 2860777 2860771 TAGTGGATAAAAAAA CTGAGC ACTCTG GCCCAG TTTTTATCTATTAAC Shewmr7_2417 2861931 - 2860831 - | hypothetical protein Shewmr7_2418 2862373 - 2862140 - | SirA family protein TERM 3576 2862755 - 2862770 + G 80 -4.6 -5.18297 | GGTCGCCCACGCCAC GGGAGT TAAA ACGCCC TTTTATTTCTTCTTA TERM 3577 2862970 - 2862958 - g 80 -3.3 -5.2422 | overlap 2862960 AAGCACAGCAAAAAA GTGGC CCG GCGAC CGTTGCAGGCCTACT Shewmr7_2419 2862486 - 2863955 + | peptidase M48, Ste24p TERM 3578 2863997 - 2864026 + F 89 -6.3 -5.34555 | gap 1, opp_overlap 2863997 2863998, overlap 2863999 GCTAATCCCTTATAA TTGCGCCCCGAACA TCC TGA-CGGGGCGCTG TTTTTTCTGCTATCA TERM 3579 2863999 - 2864024 + F 100 -11.1 -4.30057 | gap 1, opp_overlap 2863998 2863997, overlap 2863997 TAATCCCTTATAATT GCGCCCCGAACA TCC TGA-CGGGGCGC TGTTTTTTCTGCTAT Shewmr7_2420 2864079 - 2864429 + | arsenate reductase Shewmr7_2421 2864477 - 2864857 + | hypothetical protein TERM 3580 2864954 - 2864987 + F 82 -8 -4.55697 | opp_overlap 2864956, overlap 2864956 CAAGTTCAGATTAAC AAGCGCGGTTCGGT TTTAAT ACCGCTCCGCGCTG TTTGTTTCTAGAAGT TERM 3581 2864985 - 2864956 - f 86 -10.6 -3.77588 | opp_overlap 2864956 2864954 AGTTCAGATTAACAA GCGCGGTTCGGT TTTAAT ACCGCTCCGCGC TGTTTGTTTCTAGAA TERM 3582 2864956 - 2864985 + F 86 -10.6 -3.88703 | opp_overlap 2864956, overlap 2864954 AGTTCAGATTAACAA GCGCGGTTCGGT TTTAAT ACCGCTCCGCGC TGTTTGTTTCTAGAA Shewmr7_2422 2865305 - 2867239 + | hypothetical protein TERM 3583 2867335 - 2867353 + T 100 -14.6 -4.63542 | opp_overlap 2867335 GTTGGATACAAAAAA GCCCATCG TTA CGATGGGC TTTTTCAAAATTGTG TERM 3584 2867353 - 2867335 - T 100 -14.6 -5.36441 | opp_overlap 2867335 GTTGGATACAAAAAA GCCCATCG TTA CGATGGGC TTTTTCAAAATTGTG Shewmr7_2423 2868239 - 2867376 - | heat shock protein HtpX TERM 3585 2867949 - 2867962 + g 74 -6.7 -4.29396 | opp_overlap 2867948 2867949, overlap 2867934 2867933 TGGCGATTGGTAAAT TGCCA CTTC TGGCA TTTTAATCCCTGCTT TERM 3586 2868769 - 2868779 + G 74 -6.8 -4.28994 | opp_overlap 2868767 2868769 CCAAGCGATTAAAGA TGCC GAT GGCA TTTTGATCGGTGGTG Shewmr7_2424 2868527 - 2869237 + | peptidase E TERM 3587 2870931 - 2870910 - g 70 -10.9 -2.90075 | overlap 2870929 2870930 CGGCGTCTAACGATA GCCCTAGTG CCAA CACTAAGGC GCGAGTGGTTCGCAG TERM 3588 2871057 - 2871027 - g 78 -4 -5.15381 | AAGAGATTGAAAAAA TTGCCATTGATG CCAGTAT CAGCAAAGGCAA AATTCTGTCTTCCCG mdoG 2869646 - 2871229 + | glucan biosynthesis protein G TERM 3589 2871257 - 2871315 + F 100 -13.5 -3.214 | gap 1, opp_overlap 2871268 2871279, overlap 2871279 ACACTCGATTAGCGC TTTACTTAACACCATAAAAAAACGCCGG AAGT CCGGCGTTTTTTTATGG-GTAAAATCGA TATTGCTATACTCAG TERM 3590 2871305 - 2871268 - f 100 -24.5 -3.08679 | opp_overlap 2871257 2871279, overlap 2871279 GCGCTTTACTTAACA CCATAAAAAAACGCCGG AAGT CCGGCGTTTTTTTATGG GTAAAATCGATATTG TERM 3591 2871294 - 2871279 - f 100 -11.8 -5.70829 | opp_overlap 2871279 2871257, overlap 2871268 AACACCATAAAAAAA CGCCGG AAGT CCGGCG TTTTTTTATGGGTAA TERM 3592 2871279 - 2871294 + F 100 -11.8 -5.64274 | opp_overlap 2871268 2871279, overlap 2871257 AACACCATAAAAAAA CGCCGG AAGT CCGGCG TTTTTTTATGGGTAA Shewmr7_2426 2871616 - 2871765 + | hypothetical protein Shewmr7_2427 2871908 - 2872876 + | hypothetical protein TERM 3593 2872933 - 2872902 - T 100 -16.1 -3.17714 | opp_overlap 2872902 2872908, overlap 2872908 TTAAATTTGCACTAA CAAAAACAGAGGC GATATA GCCTCTGTTTTTG TATCTCATGTGCCTT TERM 3594 2872902 - 2872933 + T 100 -16.1 -2.98491 | opp_overlap 2872902 2872908, overlap 2872908 TTAAATTTGCACTAA CAAAAACAGAGGC GATATA GCCTCTGTTTTTG TATCTCATGTGCCTT TERM 3595 2872927 - 2872908 - T 100 -9.3 -5.1356 | opp_overlap 2872908 2872902, overlap 2872902 TTGCACTAACAAAAA CAGAGGC GATATA GCCTCTG TTTTTGTATCTCATG TERM 3596 2872908 - 2872927 + T 100 -9.3 -5.05601 | opp_overlap 2872902 2872908, overlap 2872902 TTGCACTAACAAAAA CAGAGGC GATATA GCCTCTG TTTTTGTATCTCATG bioD 2873657 - 2872962 - | dithiobiotin synthetase TERM 3597 2873366 - 2873354 - G 77 -9.1 -4.08216 | opp_overlap 2873352 2873350 2873354 2873360 CTAGTTTTGCCAAAA TCGCC TCT GGCGA TATGTTAATCCCCAG Shewmr7_2429 2874527 - 2873700 - | biotin biosynthesis protein BioC Shewmr7_2430 2875845 - 2874625 - | 8-amino-7-oxononanoate synthase TERM 3598 2874929 - 2874939 + g 76 -5.4 -4.87291 | opp_overlap 2874929 2874927 TTGAACAATAAGATA TTGC TCT GCAA TTTTTGCTTAAGCTC TERM 3599 2875265 - 2875252 - G 70 -9.5 -3.32294 | overlap 2875261 GCAAAGTGCGGATAA CGCCG AAAT CGGCG CGATATCGCCATCCA TERM 3600 2875830 - 2875844 + g 87 -4.3 -5.5112 | AACCCAGTTTTGAGG TGAGT GGTGA ACTCA TTTTTTCTTACTCAA TERM 3601 2875980 - 2876037 + r 70 -5.7 -4.25283 | gap 2 CTGAGTCTCGCCGCC CGCACTATCTTTGGAGCCTGCGCTTCG CCTTAA CGAAGCACAAG-TCCAAAGAT-GCGAG TTTTACTGAGGCGAT Shewmr7_2431 2877114 - 2876062 - | biotin synthase TERM 3602 2878543 - 2878511 - g 81 -12.7 -3.22656 | opp_overlap 2878517, overlap 2878515 AACCCAAGCCATGAA GCAAGTGGCAGCG ACGATTA CGCCGCCTCTTGC CGCTCAAGCCGAGGC Shewmr7_2432 2877237 - 2878595 + | aminotransferase Shewmr7_2433 2882054 - 2878614 - | multi-sensor hybrid histidine kinase TERM 3603 2881323 - 2881308 - G 74 -3.9 -5.03994 | CGGCATACATAAAAA CGCCG CCATGC CGACG AGTAGCTCAGGCATT TERM 3604 2882564 - 2882552 - g 76 -7.7 -4.30014 | GCGAGCAACGTAAAA TCACC TAC GGTGA GCTACACACCCAAGT Shewmr7_2434 2882230 - 2884182 + | acetyl-CoA synthetase TERM 3605 2884190 - 2884227 + F 100 -17.9 -3.70149 | opp_overlap 2884184 2884183, overlap 2884176 2884191 2884193 ACGAGTAATCGTTAT CCAGCGCTTAATCGTGA TTTA TCACGGTTAAGCGCTGC TTTAGCTCCTGTACG TERM 3606 2884191 - 2884226 + F 100 -21.4 -2.81768 | opp_overlap 2884184 2884183, overlap 2884176 2884190 2884193 CGAGTAATCGTTATC CAGCGCTTAATCGTGA TTTA TCACGGTTAAGCGCTG CTTTAGCTCCTGTAC TERM 3607 2884193 - 2884224 + F 100 -18.2 -2.95384 | opp_overlap 2884184 2884183, overlap 2884176 2884191 2884190 AGTAATCGTTATCCA GCGCTTAATCGTGA TTTA TCACGGTTAAGCGC TGCTTTAGCTCCTGT TERM 3608 2884328 - 2884348 + F 100 -8.3 -5.69379 | CCCCTTTCTCTTAGT TGCCCCT CCAACCA AGGGGCA TTTTTTTGGTTCTGT Shewmr7_2435 2884410 - 2886182 + | type III restriction enzyme, res subunit grxA 2886243 - 2886503 + | glutaredoxin 1 TERM 3609 2886543 - 2886517 - T 100 -16.8 -3.9344 | opp_overlap 2886517 2886522, overlap 2886522 AATCCTAATATCAAA TAAAAGGAGACC TGA GGTCTCCTTTTA TTTATCTATATAAAA TERM 3610 2886517 - 2886543 + T 100 -16.8 -4.17296 | opp_overlap 2886517 2886522, overlap 2886522 AATCCTAATATCAAA TAAAAGGAGACC TGA GGTCTCCTTTTA TTTATCTATATAAAA TERM 3611 2886522 - 2886538 + T 100 -12.3 -5.07523 | opp_overlap 2886517 2886522, overlap 2886517 TAATATCAAATAAAA GGAGACC TGA GGTCTCC TTTTATTTATCTATA TERM 3612 2886538 - 2886522 - T 100 -12.3 -4.99568 | opp_overlap 2886522 2886517, overlap 2886517 TAATATCAAATAAAA GGAGACC TGA GGTCTCC TTTTATTTATCTATA Shewmr7_2437 2887724 - 2886561 - | hypothetical protein TERM 3613 2888920 - 2888970 + r 78 -4.2 -5.0925 | gap 4, opp_overlap 2888941, overlap 2888927 AACGACCCATTTACT GGTATT-T-TGCGCCC-C-GAACGAC CTC GCCGTTCCGAGGGCGCCTATAATACC TTTTTCATTTTCCCA TERM 3614 2889028 - 2889042 + r 76 -2.8 -5.32565 | opp_overlap 2889028, overlap 2889021 2889020 CGTTTGCATGAAAAA CAGACT AAG AGTATG TTTTTTAGTTAATTA Shewmr7_2438 2889807 - 2889055 - | hypothetical protein TERM 3615 2889779 - 2889731 - G 76 -11 -3.18737 | gap 1, overlap 2889729 2889740 GAACCACCAGCAATA TCTTCAACAGGAGCAGGAGCTGC AACT GCAGCTCCTGCGCC-GAAGAACA TTGCCGTAATTAAGA TERM 3616 2889771 - 2889740 - G 100 -20.2 -3.06315 | overlap 2889731 2889729 GCAATATCTTCAACA GGAGCAGGAGCTGC AACT GCAGCTCCTGCGCC GAAGAACATTGCCGT Shewmr7_2439 2890368 - 2889832 - | OmpA/MotB domain-containing protein Shewmr7_2440 2891743 - 2890415 - | TolB domain-containing protein TERM 3617 2890804 - 2890769 - G 70 -9 -3.57918 | opp_overlap 2890769, overlap 2890770 ATCTACACGATATAA CTGTGGTCTACCACCG CGCT CGGAGGTAAACAACAA TGACTTGCCATCGGG TERM 3618 2891753 - 2891784 + r 70 -5.4 -4.49958 | gap 1, opp_overlap 2891762, overlap 2891757 TTTCATGGGACTCCT TTAA-TTAAACGTTG GTT CAACGATTAAGTTAA TTTCTTTCATCAAGT TERM 3619 2891774 - 2891762 - R 72 -7.7 -3.90291 | opp_overlap 2891757 2891753 ACTCCTTTAATTAAA CGTTG GTT CAACG ATTAAGTTAATTTCT Shewmr7_2441 2892775 - 2891753 - | TolA family protein Shewmr7_2442 2893210 - 2892776 - | biopolymer transport protein ExbD/TolR Shewmr7_2443 2893896 - 2893210 - | MotA/TolQ/ExbB proton channel Shewmr7_2444 2894287 - 2893886 - | 4-hydroxybenzoyl-CoA thioesterase TERM 3620 2894422 - 2894439 + r 100 -11.3 -3.92178 | opp_overlap 2894422 ATTTGTAAATAACAA TGGGGTC AAAC GACCCCA TTTCATTAACATAGT TERM 3621 2894439 - 2894422 - R 100 -11.3 -4.08958 | opp_overlap 2894422 ATTTGTAAATAACAA TGGGGTC AAAC GACCCCA TTTCATTAACATAGT Shewmr7_2445 2896641 - 2894458 - | prolyl oligopeptidase TERM 3622 2896624 - 2896610 - G 83 -10 -4.24342 | GTGGCCACTAATAAA CCTTGC TGG GCAAGG CGAAATCTTAATGCC TERM 3623 2897094 - 2897114 + r 100 -15.5 -5.81412 | AATGCATTTTTTGCG GCCCGCTTA GAT TAAGCGGGC TTTTTTTTACCTCGA TERM 3624 2897154 - 2897166 + r 85 -4.1 -5.4833 | GCCGCGAAAATCTAG CGATT TAC AGTCG TTTTTTGTTACATAA TERM 3625 2897360 - 2897327 - R 88 -11.1 -3.86897 | opp_overlap 2897330 2897333, overlap 2897330 2897333 TGCACGCTTCATAAA TGACAATGCCAAGTC CGAA GACTTGGCATTGTTG TCAGTGGCATATCTT TERM 3626 2897357 - 2897330 - R 100 -17.2 -3.01125 | opp_overlap 2897330 2897333, overlap 2897327 2897333 ACGCTTCATAAATGA CAATGCCAAGTC CGAA GACTTGGCATTG TTGTCAGTGGCATAT TERM 3627 2897330 - 2897357 + r 100 -17.2 -3.36505 | opp_overlap 2897330 2897327 2897333, overlap 2897333 ACGCTTCATAAATGA CAATGCCAAGTC CGAA GACTTGGCATTG TTGTCAGTGGCATAT TERM 3628 2897354 - 2897333 - R 100 -13.1 -3.64915 | opp_overlap 2897330 2897333, overlap 2897330 2897327 CTTCATAAATGACAA TGCCAAGTC CGAA GACTTGGCA TTGTTGTCAGTGGCA TERM 3629 2897333 - 2897354 + r 100 -13.1 -3.8211 | opp_overlap 2897333 2897330 2897327, overlap 2897330 CTTCATAAATGACAA TGCCAAGTC CGAA GACTTGGCA TTGTTGTCAGTGGCA Shewmr7_2446 2898304 - 2897432 - | OmpA/MotB domain-containing protein Shewmr7_2447 2898447 - 2899115 + | ribonuclease T TERM 3630 2899163 - 2899148 - T 100 -10.4 -5.4505 | opp_overlap 2899148 CCTGCCAATAAAAAA GCTGCC CTGA GGCAGC TTTTTTATTACAAGA TERM 3631 2899148 - 2899163 + T 100 -10.4 -5.4505 | opp_overlap 2899148 CCTGCCAATAAAAAA GCTGCC CTGA GGCAGC TTTTTTATTACAAGA Shewmr7_2448 2899795 - 2899190 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 3632 2899223 - 2899244 + g 70 -9.5 -3.26546 | gap 1, opp_overlap 2899222 2899221 TTCTGCTAAGTAAGC CGCAA-CACC TTC GGTGCTTGCG TTCATACCTTTGTCG Shewmr7_2449 2900166 - 2901485 + | Na+/H+ antiporter NhaC TERM 3633 2901541 - 2901510 - T 100 -19 -3.02144 | opp_overlap 2901510 2901517, overlap 2901512 2901517 TCATGGGCGTTAACA TACAAAAGCGTGGA TAAT TCCACGCTTTTGTA TTTGCTAGGCACACA TERM 3634 2901510 - 2901541 + T 100 -19 -3.72576 | opp_overlap 2901510 2901512 2901517, overlap 2901517 TCATGGGCGTTAACA TACAAAAGCGTGGA TAAT TCCACGCTTTTGTA TTTGCTAGGCACACA TERM 3635 2901539 - 2901512 - T 100 -17.2 -3.06815 | opp_overlap 2901510 2901517, overlap 2901510 2901517 ATGGGCGTTAACATA CAAAAGCGTGGA TAAT TCCACGCTTTTG TATTTGCTAGGCACA TERM 3636 2901517 - 2901534 + T 100 -11.3 -4.82128 | opp_overlap 2901517 2901512 2901510, overlap 2901510 CGTTAACATACAAAA GCGTGGA TAAT TCCACGC TTTTGTATTTGCTAG TERM 3637 2901534 - 2901517 - T 100 -11.3 -4.67943 | opp_overlap 2901510 2901517, overlap 2901512 2901510 CGTTAACATACAAAA GCGTGGA TAAT TCCACGC TTTTGTATTTGCTAG Shewmr7_2450 2902224 - 2901559 - | RDD domain-containing protein TERM 3638 2902318 - 2902308 - R 71 -3.2 -4.94992 | TTAAACGCAGAAAAA TAGC ATT GCCA CCGCTCTAACTCAAC TERM 3639 2902412 - 2902397 - R 100 -10.4 -5.94713 | opp_overlap 2902397 AGCGCATAAAAAAAA GGGAGC CTAA GCTCCC TTTTGCACTTTAAGA TERM 3640 2902397 - 2902412 + r 91 -10.4 -4.24002 | opp_overlap 2902397 AGCGCATAAAAAAAA GGGAGC CTAA GCTCCC TTTTGCACTTTAAGA upp 2903076 - 2902450 - | uracil phosphoribosyltransferase TERM 3641 2903654 - 2903641 - g 80 -3.1 -5.31877 | gap 1, opp_overlap 2903650, overlap 2903643 2903644 2903646 2903648 2903650 ATCGATTACAAAAAA CACGAC ACA GTCG-G TATCGACTTAGTGGC TERM 3642 2903653 - 2903643 - g 74 -6.8 -4.29153 | opp_overlap 2903650, overlap 2903641 2903644 2903646 2903648 2903650 CGATTACAAAAAACA CGAC ACA GTCG GTATCGACTTAGTGG Shewmr7_2452 2903404 - 2904441 + | phosphoribosylaminoimidazole synthetase TERM 3643 2904707 - 2904681 - g 76 -5.8 -4.7078 | opp_overlap 2904682 2904687 2904689, overlap 2904683 GCAACGATTGAAAAA TACCAACCCGAT TTA ATCGTGTTGGCT GGATTTATGCGTATT TERM 3644 2904705 - 2904683 - g 82 -10.6 -3.96486 | opp_overlap 2904682 2904687 2904689, overlap 2904681 AACGATTGAAAAATA CCAACCCGAT TTA ATCGTGTTGG CTGGATTTATGCGTA Shewmr7_2453 2904441 - 2905085 + | phosphoribosylglycinamide formyltransferase TERM 3645 2905104 - 2905120 + F 100 -8 -5.94597 | opp_overlap 2905104 CTGCCTCGCGAAAAA GAGACC ATAAG GGTCTC TTTTTTTTCGTCTTG TERM 3646 2905120 - 2905104 - f 82 -8 -4.56597 | opp_overlap 2905104 CTGCCTCGCGAAAAA GAGACC ATAAG GGTCTC TTTTTTTTCGTCTTG TERM 3647 2905844 - 2905868 + G 70 -9.3 -3.50853 | overlap 2905845 ACCGATATTCTTGCG GGGTTTCAAGC GGG GCTTGAGACCA TTCTGGTTACCAGCG TERM 3648 2905845 - 2905867 + G 76 -12.8 -2.70298 | overlap 2905844 CCGATATTCTTGCGG GGTTTCAAGC GGG GCTTGAGACC ATTCTGGTTACCAGC Shewmr7_2454 2905223 - 2905969 + | UMP phosphatase Shewmr7_2455 2906167 - 2907840 + | peptidase M28 TERM 3649 2907875 - 2907898 + F 100 -14 -4.17048 | opp_overlap 2907870 2907878, overlap 2907878 CGCTGAAAAATCCCA TAAGGCACCT TGAG AGGTGCCTTA TTATTTTACCAGCCG TERM 3650 2907878 - 2907895 + F 100 -11.3 -4.20868 | opp_overlap 2907870 2907878, overlap 2907875 TGAAAAATCCCATAA GGCACCT TGAG AGGTGCC TTATTATTTTACCAG TERM 3651 2907895 - 2907878 - f 89 -11.3 -3.44553 | opp_overlap 2907878 2907875, overlap 2907870 TGAAAAATCCCATAA GGCACCT TGAG AGGTGCC TTATTATTTTACCAG asnB 2908308 - 2909972 + | asparagine synthetase B TERM 3652 2910041 - 2910004 - f 78 -5.2 -4.97402 | gap 1, opp_overlap 2910011, overlap 2910011 TAAAAGTCACAAAAA TATGAAA-TCCAATGAA TACAT TTCATTGGATTTTTATA TTTACAACAAAAATC TERM 3653 2910011 - 2910033 + F 100 -9.3 -5.19879 | opp_overlap 2910004 2910011 CACAAAAATATGAAA TCCAATGAA TACAT TTCATTGGA TTTTTATATTTACAA TERM 3654 2910033 - 2910011 - f 85 -9.3 -4.16158 | opp_overlap 2910011, overlap 2910004 CACAAAAATATGAAA TCCAATGAA TACAT TTCATTGGA TTTTTATATTTACAA Shewmr7_2457 2910331 - 2911197 + | glycosyl transferase family protein TERM 3655 2911324 - 2911312 - T 76 -7.7 -4.1899 | opp_overlap 2911311 TTATTTGATGGAAAA CTGTC AAT GACAG ATTAAGTGCCGGAAC Shewmr7_2458 2913619 - 2911391 - | TonB-dependent siderophore receptor TERM 3656 2913635 - 2913657 + r 76 -10.6 -2.93236 | overlap 2913638 AAAGTCCCCCAACCT CGAGTAGACC TGT GGTCTACTCC TGTCATCTTAAGTTG TERM 3657 2913638 - 2913654 + r 76 -10.9 -2.70232 | overlap 2913635 GTCCCCCAACCTCGA GTAGACC TGT GGTCTAC TCCTGTCATCTTAAG TERM 3658 2913807 - 2913844 + r 100 -10 -5.12068 | opp_overlap 2913816, overlap 2913810 CTAGGCCAGCGCCAG CATCAAAAAGCCAGCA TCACTC TGCTGGCTTTTTACTG TTTTTATTGGCTATA TERM 3659 2913810 - 2913841 + r 77 -10.3 -3.09664 | opp_overlap 2913816, overlap 2913807 GGCCAGCGCCAGCAT CAAAAAGCCAGCA TCACTC TGCTGGCTTTTTA CTGTTTTTATTGGCT TERM 3660 2913835 - 2913816 - R 100 -9.3 -4.77036 | opp_overlap 2913810 2913807 CGCCAGCATCAAAAA GCCAGCA TCACTC TGCTGGC TTTTTACTGTTTTTA Shewmr7_2459 2915669 - 2913879 - | acyl-CoA dehydrogenase domain-containing protein TERM 3661 2915382 - 2915342 - G 73 -6 -4.56597 | overlap 2915343 TCTCGGTGGCAAAAA TCCCGACTACTTCGGGCA GTCCT TGACCACCGTAGGCGGGA TCGCAGGTCAGTGTC Shewmr7_2460 2915896 - 2916744 + | aldose 1-epimerase TERM 3662 2916792 - 2916774 - T 85 -7.4 -4.90266 | opp_overlap 2916774, overlap 2916768 CCCATCAATGAAAAA GCCCAG TGCATGG CTGGGC TTTTTATGCCATCAA TERM 3663 2916774 - 2916792 + T 91 -8.1 -4.85599 | opp_overlap 2916774 2916768 CCCATCAATGAAAAA GCCCAGT GCATG GCTGGGC TTTTTATGCCATCAA Shewmr7_2461 2917713 - 2916838 - | 6-phosphogluconate dehydrogenase, NAD-binding protein TERM 3664 2917941 - 2917928 - R 71 -2.3 -5.14965 | ATCCGTAGCAAAAAA CGCTG GCGG CAGTG TAGCACTCGCTTAGG TERM 3665 2917985 - 2917975 - R 82 -6.8 -4.8048 | GCGTCAGAGTAAAAA TGCC CTC GGCA GCAAACGCAGTGTTC TERM 3666 2918011 - 2918036 + r 100 -9 -4.82901 | opp_overlap 2918012 2918016, overlap 2918012 TGTTCGACAGAAACA ACAAAGGCGC ACACTG GCGCCTTTGC TTTTTATCACGAGCC TERM 3667 2918035 - 2918012 - R 100 -12.5 -4.14627 | opp_overlap 2918011 2918012, overlap 2918016 GTTCGACAGAAACAA CAAAGGCGC ACACTG GCGCCTTTG CTTTTTATCACGAGC TERM 3668 2918012 - 2918035 + r 100 -12.5 -3.49419 | opp_overlap 2918012 2918016, overlap 2918011 GTTCGACAGAAACAA CAAAGGCGC ACACTG GCGCCTTTG CTTTTTATCACGAGC TERM 3669 2918031 - 2918016 - R 81 -7.5 -4.65458 | opp_overlap 2918012 2918011, overlap 2918012 GACAGAAACAACAAA GGCGC ACACTG GCGCC TTTGCTTTTTATCAC Shewmr7_2462 2918535 - 2918056 - | thioesterase superfamily protein Shewmr7_2463 2919020 - 2918652 - | hypothetical protein TERM 3670 2919161 - 2919176 + r 100 -10.4 -5.61596 | opp_overlap 2919161 CGAGCATAAAAAAAA TGCGCC CATA GGCGCA TTTTTTTATCGAGCT TERM 3671 2919176 - 2919161 - R 100 -10.4 -5.9873 | opp_overlap 2919161 CGAGCATAAAAAAAA TGCGCC CATA GGCGCA TTTTTTTATCGAGCT Shewmr7_2464 2920439 - 2919201 - | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 3672 2919490 - 2919500 + g 72 -8.2 -3.85698 | ACTGATTTCACCGCT GCCG CTT CGGC TTTATCGCCCGCAGG TERM 3673 2920631 - 2920610 - R 100 -15.9 -5.45802 | opp_overlap 2920610 GGGCTAAAACAAAAA CAGGCGGCA TATA TGCCGCCTG TTCTCTAGAATTCAG TERM 3674 2920610 - 2920631 + r 100 -15.9 -3.52192 | opp_overlap 2920610 GGGCTAAAACAAAAA CAGGCGGCA TATA TGCCGCCTG TTCTCTAGAATTCAG TERM 3675 2920673 - 2920697 + r 73 -7.2 -4.24123 | CTTAGAAACGTAATC GATCGCTGCT TGAAC AGTAGTGATC TTTTCAGCTTCTTCA Shewmr7_2465 2920882 - 2920649 - | acyl carrier protein TERM 3676 2920919 - 2920904 - R 70 -7.6 -3.64703 | TCTTTCCTATTCAAA TTACGC ACTT GCGTAA GATTGCGAGTAGTTT TERM 3677 2920965 - 2920985 + r 100 -12.7 -3.53761 | opp_overlap 2920958 CAATGCAAGCTTAGT TTTCGTGGT CTA ACCACGAAA TTTAGCGACCAATTG Shewmr7_2466 2921792 - 2921046 - | 3-oxoacyl-[acyl-carrier-protein] reductase Shewmr7_2467 2922728 - 2921802 - | [Acyl-carrier-protein] S-malonyltransferase TERM 3678 2922801 - 2922770 - R 83 -9.6 -3.93782 | opp_overlap 2922770, overlap 2922771 2922796 TTATTGAACACTAAA CCGTTATCTTGG ACAGCAAA CCAAGATAACGA TAGTTAGGAATTTAG TERM 3679 2922800 - 2922771 - R 79 -10.9 -2.95787 | opp_overlap 2922770, overlap 2922770 2922796 TATTGAACACTAAAC CGTTATCTTGG ACAGCAAA CCAAGATAACG ATAGTTAGGAATTTA Shewmr7_2468 2923792 - 2922833 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3680 2923708 - 2923719 + g 76 -4.4 -5.04987 | CAATCCATTGGTCAC TGGT TTCC ACCA TTTTTTCCAAATCTT Shewmr7_2469 2924830 - 2923802 - | putative glycerol-3-phosphate acyltransferase PlsX rpmF 2925016 - 2924846 - | 50S ribosomal protein L32 Shewmr7_2471 2925558 - 2925034 - | hypothetical protein Shewmr7_2472 2925816 - 2926430 + | maf protein Shewmr7_2473 2927291 - 2926545 - | HAD family hydrolase Shewmr7_2474 2928321 - 2927332 - | ribosomal large subunit pseudouridine synthase C TERM 3681 2927792 - 2927814 + g 73 -2.7 -5.00616 | gap 1, overlap 2927793 TGACGCAGTTGATCG TGCAGATGCT TAAG GGCA-CTGCG TTTTTTCGCCACCAG TERM 3682 2930526 - 2930516 - g 71 -6.8 -4.15044 | CCTGTTGCCAACAAA GTGG AAG CCAC CGAGCCAGGTTTCTT TERM 3683 2930556 - 2930568 + G 71 -6.9 -4.1822 | TCAGCAAACTGTTCA GTGCC ATT GGCGC TTTCTTCAGCTCAAG TERM 3684 2930637 - 2930623 - g 73 -2.8 -5.00138 | CACTGAAACCAAAAA GTCTGA CAG CCAAAC GGCCAATGCGAACCG TERM 3685 2931305 - 2931293 - g 75 -9.1 -3.90286 | opp_overlap 2931304, overlap 2931287 GATGATAAAGCGAAA CGCGA ATC TCGCG ATGGACAGCGTCGTA Shewmr7_2475 2928887 - 2932174 + | RNAse E TERM 3686 2932189 - 2932220 + F 100 -13.2 -4.09739 | opp_overlap 2932196, overlap 2932196 ATCGCCAAGTCGTTG TTAAAAAGCCATGC ACTT GCATGGCTTTTTTA TTTTCAGCCAATTCA TERM 3687 2932213 - 2932196 - f 100 -11.3 -4.56775 | opp_overlap 2932196 2932189 AGTCGTTGTTAAAAA GCCATGC ACTT GCATGGC TTTTTTATTTTCAGC TERM 3688 2932196 - 2932213 + F 100 -11.3 -5.79595 | opp_overlap 2932196, overlap 2932189 AGTCGTTGTTAAAAA GCCATGC ACTT GCATGGC TTTTTTATTTTCAGC TERM 3689 2932227 - 2932263 + F 87 -5.1 -5.54885 | GCTTTTTTATTTTCA GCCAATTCAGCCATATT TAA GGTTTAGCTGAATAGGC TTTTTTGTTAGTATT Shewmr7_2476 2932301 - 2933878 + | sulphate transporter TERM 3690 2934029 - 2934019 - T 78 -5.4 -4.9725 | ACGTTCACACAAAAA CCTA TGC TAGG TAAGGATGAGCTAAA TERM 3691 2934316 - 2934293 - T 91 -6.7 -5.42975 | opp_overlap 2934293 CGACACAAATAAAAA GAGCCATGG AATAAA CCACAGCTC TTAAATCCATTGCTA Shewmr7_2477 2934569 - 2934360 - | cold-shock DNA-binding protein family protein rrmA 2935691 - 2934876 - | 23S rRNA methyltransferase A TERM 3692 2934937 - 2934948 + g 70 -4.4 -4.63218 | overlap 2934934 CTTAACCCACTTCGA GCAA ATGC TTGC TTTTGTTCCGCAGAA Shewmr7_2479 2936530 - 2935724 - | hypothetical protein TERM 3693 2937483 - 2937470 - g 74 -2.3 -5.1963 | opp_overlap 2937470 TCCAAGCAACAAAAA CGCCA TTAT TTGCG TTAACTTAGCGATGG sbcB 2936706 - 2938118 + | exonuclease I Shewmr7_2481 2938318 - 2939208 + | cytidine deaminase Shewmr7_2482 2939511 - 2939305 - | hypothetical protein Shewmr7_2483 2939839 - 2939492 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3694 2939731 - 2939721 - G 70 -3.2 -4.75472 | CCCACATCAATAAAA CAGC TGT ACTG CGGGCCGTAATCCTC TERM 3695 2939889 - 2939874 - R 100 -10.4 -5.54338 | TAATCAAAATAAAAA GGGAGC CAAT GCTCCC TAAAAGTATGCTGGC Shewmr7_2484 2940619 - 2939915 - | hypothetical protein TERM 3696 2940967 - 2940949 - H 70 -6 -4.36127 | CTCAATAACTCAAAA CATAAGGG ATG CGCTTATG GACTCTGCATTTAAT Shewmr7_2485 2940965 - 2941345 + | glyoxalase family protein TERM 3697 2942108 - 2942090 - g 88 -10.3 -4.2231 | opp_overlap 2942089 2942092 AACCACCACTGAAAA TACCCGC CCACT GCGGGTA ATATTAGGTGAATTC TERM 3698 2942934 - 2942899 - g 73 -3.2 -5.00616 | gap 1 CGGCCTCGGAAAAAA GCGCCACAGAACA-GCA AGA TGCCTGGTTAGTGGCAC TGGGCGGGCTGAGTA Shewmr7_2486 2941614 - 2944817 + | hypothetical protein TERM 3699 2944832 - 2944879 + F 95 -13 -3.19371 | opp_overlap 2944838 2944846 2944847, overlap 2944846 2944847 ACCCGCATATCAGCG TATAGATATAAAAACGCCCAGT TCAC ACTGGGCATTTTTATATCGAAA TTCAATTCACTGACT TERM 3700 2944873 - 2944838 - f 100 -17.2 -2.9039 | opp_overlap 2944832 2944846 2944847, overlap 2944846 2944847 ATATCAGCGTATAGA TATAAAAACGCCCAGT TCAC ACTGGGCATTTTTATA TCGAAATTCAATTCA TERM 3701 2944846 - 2944865 + F 95 -7.8 -4.9725 | opp_overlap 2944846 2944838 2944847, overlap 2944832 2944847 GTATAGATATAAAAA CGCCCAGT TCAC ACTGGGCA TTTTTATATCGAAAT TERM 3702 2944865 - 2944846 - f 100 -10 -5.07275 | opp_overlap 2944832 2944846 2944847, overlap 2944838 2944847 GTATAGATATAAAAA CGCCCAGT TCAC ACTGGGCA TTTTTATATCGAAAT TERM 3703 2944864 - 2944847 - f 90 -11.3 -3.6328 | opp_overlap 2944846 2944832 2944847, overlap 2944846 2944838 TATAGATATAAAAAC GCCCAGT TCAC ACTGGGC ATTTTTATATCGAAA TERM 3704 2944847 - 2944864 + F 90 -11.3 -3.57627 | opp_overlap 2944847 2944846 2944838, overlap 2944846 2944832 TATAGATATAAAAAC GCCCAGT TCAC ACTGGGC ATTTTTATATCGAAA Shewmr7_2487 2945033 - 2945389 + | glutaredoxin TERM 3705 2945420 - 2945391 - T 83 -10.7 -3.53343 | opp_overlap 2945397, overlap 2945396 2945397 AACGCTTTGCCTAAA TGAAATGCGCGCC CTAT GGCGCGCTTTTTA TTTACATCGCTTTAC TERM 3706 2945415 - 2945396 - T 89 -10.6 -4.05788 | opp_overlap 2945397, overlap 2945391 2945397 TTTGCCTAAATGAAA TGCGCGCC CTAT GGCGCGCT TTTTATTTACATCGC TERM 3707 2945397 - 2945414 + T 100 -14.1 -5.30616 | opp_overlap 2945396 2945391 2945397 TTGCCTAAATGAAAT GCGCGCC CTAT GGCGCGC TTTTTATTTACATCG TERM 3708 2945414 - 2945397 - T 100 -14.1 -3.03151 | opp_overlap 2945397, overlap 2945396 2945391 TTGCCTAAATGAAAT GCGCGCC CTAT GGCGCGC TTTTTATTTACATCG Shewmr7_2488 2946136 - 2945447 - | hypothetical protein TERM 3709 2946216 - 2946191 - H 72 -7.7 -3.82603 | AAGCGGTAAAGATAA GCGATATAC GAGAGTGA GTATATCGC GAATAAAACCCATAA Shewmr7_2489 2946300 - 2946764 + | putative lipoprotein TERM 3710 2946830 - 2946808 - T 100 -12.1 -5.59879 | opp_overlap 2946808 2946811 TATAAAGATAAAAAA TAAGGGCGA AGTTA TCGCCCTTA TTTCAACGCGTTAGA TERM 3711 2946808 - 2946830 + T 91 -12.1 -3.55622 | opp_overlap 2946808, overlap 2946811 TATAAAGATAAAAAA TAAGGGCGA AGTTA TCGCCCTTA TTTCAACGCGTTAGA TERM 3712 2946811 - 2946827 + T 83 -9.4 -3.91488 | opp_overlap 2946808, overlap 2946808 AAAGATAAAAAATAA GGGCGA AGTTA TCGCCC TTATTTCAACGCGTT Shewmr7_2490 2947077 - 2946898 - | hypothetical protein Shewmr7_2491 2948074 - 2947067 - | lipid-A-disaccharide synthase TERM 3713 2948050 - 2948012 - G 86 -8.2 -4.61147 | gap 1, overlap 2948013 GAATAGCACAGAAAA CGGCAGCAAGAGCCACC GCAATG GGTGGCCCTCG-TACCA AATTTTATTTACCAG TERM 3714 2948049 - 2948013 - G 72 -9.5 -3.35604 | gap 1, overlap 2948012 AATAGCACAGAAAAC GGCAGCAAGAGCCACC GCAATG GGTGGCCCTCG-TACC AAATTTTATTTACCA Shewmr7_2492 2949880 - 2948075 - | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA TERM 3715 2948885 - 2948875 - G 70 -3.2 -4.8143 | overlap 2948876 CTAACAATTCAAAAA CCGT GGT ACAG GCCGCAATACCGCGC TERM 3716 2949081 - 2949098 + g 79 -11.3 -3.55966 | opp_overlap 2949067 AGCGGCTGGCTAACC GCTTGCG CGAC CGCAAGC TTCATATTTTGATGA TERM 3717 2949107 - 2949129 + g 71 -7.8 -4.07568 | CGCAAGCTTCATATT TTGATGACGG TTT CTGTCATTAA TTTTGGCAAAGCGAG Shewmr7_2493 2952234 - 2949913 - | DNA internalization-related competence protein ComEC/Rec2 TERM 3718 2952233 - 2952222 - G 70 -3 -4.82855 | opp_overlap 2952230, overlap 2952230 CACTAAAGCCAAAAA TGAA TCCA TTCA TAGTGAATTAAGTTA Shewmr7_2494 2952267 - 2952776 + | hypothetical protein TERM 3719 2953370 - 2953390 + G 70 -3.1 -4.75372 | ATGATTTTTGGTTTT GTCTGCGCC GTC GTGGCAGGC TTTTTACTGACTGCT TERM 3720 2953419 - 2953431 + G 71 -10.5 -3.0806 | CTGTGCAAAACTGGA CCGGG CGC CCCGG TGTTAAGGGTTTGCC TERM 3721 2953589 - 2953606 + G 71 -6.3 -4.40003 | gap 1, opp_overlap 2953588, overlap 2953601 ATTTCGGTGATAGAG GTT-CGCC AGT GGCGCAAC TTTGTGTTTATCCCC Shewmr7_2495 2953169 - 2954341 + | NnrS family protein TERM 3722 2954436 - 2954446 + F 75 -5.4 -4.89233 | CGCGCCTCTTTTCCC TACC TAA GGTA TTTTTACTGTTACTA Shewmr7_2496 2954491 - 2954895 + | phosphate-starvation-inducible E TERM 3723 2954905 - 2954933 + F 81 -11.8 -2.52635 | opp_overlap 2954923 2954924, overlap 2954904 AATTAAGCTTTCTGC GCGCCATTGC CACACAAAC GCAATGGCGC ATTGCTCCTGCCACT Shewmr7_2497 2955047 - 2955349 + | type IV pilus assembly PilZ Shewmr7_2498 2955427 - 2956095 + | hypothetical protein Shewmr7_2499 2956082 - 2956426 + | RepA domain-containing protein TERM 3724 2956467 - 2956451 - T 70 -2.9 -5.055 | opp_overlap 2956462, overlap 2956457 2956458 2956461 TTAATTCTTAAAAAA CAAAAGG TAA CCCTTAG CAGTATTGCTGAGGT TERM 3725 2956462 - 2956481 + T 73 -8.6 -3.66803 | opp_overlap 2956451 2956461 2956458 2956457 AAAACAAAAGGTAAC CCTTAGCA GTAT TGCTGAGG TTTAAGATGTTCCCA Shewmr7_2500 2956788 - 2956540 - | hypothetical protein Shewmr7_2501 2956917 - 2958599 + | signal transduction histidine kinase, LytS TERM 3726 2959153 - 2959143 - g 80 -2.4 -5.4505 | TGTTGGAAGAAAAAA CGCC GCT GGTG CGTTGCCATCGCCAA Shewmr7_2502 2958596 - 2959306 + | putative two-component response-regulatory protein YehT Shewmr7_2503 2959502 - 2960950 + | carbon starvation protein CstA TERM 3727 2961011 - 2960992 - f 100 -13.6 -3.29324 | opp_overlap 2960992, overlap 2960987 GCGACTCAAATTGAA CGGGCACT CAAC AGTGCCCG TTTTTTTATCCATCA TERM 3728 2960992 - 2961011 + F 100 -13.6 -5.64274 | opp_overlap 2960992 2960987 GCGACTCAAATTGAA CGGGCACT CAAC AGTGCCCG TTTTTTTATCCATCA TERM 3729 2961317 - 2961299 - g 71 -5.2 -4.50686 | overlap 2961300 TTAAAAACCAATAAA CTGCCGCT GCC AGCCGCAA AATCATCCAACGCAC Shewmr7_2504 2961089 - 2961451 + | hypothetical protein TERM 3730 2961507 - 2961545 + T 100 -15.5 -4.58283 | opp_overlap 2961510, overlap 2961510 AAAAAGAACAGACAA AAATGCGCGGGATAATT CACTC GATTATCCCGCGCATTA TTTTTAAGGGGGTTA TERM 3731 2961510 - 2961542 + T 100 -17.2 -4.40561 | opp_overlap 2961510, overlap 2961507 AAGAACAGACAAAAA TGCGCGGGATAATT CACTC GATTATCCCGCGCA TTATTTTTAAGGGGG TERM 3732 2961542 - 2961510 - T 100 -16.5 -5.1383 | opp_overlap 2961507 2961510 AAGAACAGACAAAAA TGCGCGGGATAAT TCACTCG ATTATCCCGCGCA TTATTTTTAAGGGGG Shewmr7_2505 2962705 - 2961596 - | L-sorbosone dehydrogenase (SNDH) Shewmr7_2506 2962871 - 2963329 + | hypothetical protein Shewmr7_2507 2964273 - 2963395 - | hypothetical protein Shewmr7_2508 2964999 - 2964388 - | GTP cyclohydrolase II TERM 3733 2964750 - 2964769 + g 74 -7.8 -4.18762 | opp_overlap 2964750 2964749 2964748 2964752, overlap 2964753 AATATAAGATAAATC CACTGCCG GTTT CGGCAATG TTTTGCATCGCAGTT TERM 3734 2965235 - 2965206 - R 79 -11.7 -2.55544 | gap 1, opp_overlap 2965202 2965197 2965215, overlap 2965202 CCACGATTCAAGGCA TTGCAAAATA-GGC ATT GCCATATTTTGCAA CTCAATGAATAACTT Shewmr7_2509 2965618 - 2965262 - | hypothetical protein nrdG 2966205 - 2965744 - | anaerobic ribonucleotide reductase-activating protein TERM 3735 2966280 - 2966254 - R 100 -10.2 -4.32046 | GGGCTAAAAATCAAA GCACAGTCGC CACCAGT GCAACTGTGC CAGTGTAACAAAACA Shewmr7_2511 2968428 - 2966311 - | anaerobic ribonucleoside triphosphate reductase TERM 3736 2967284 - 2967274 - G 79 -6.8 -4.63928 | opp_overlap 2967283, overlap 2967265 ATAGGAGCCTAAAAA GCTG CGA CAGC CCATAGGGGTTTTAA TERM 3737 2968505 - 2968462 - R 80 -10 -3.71672 | gap 1, opp_overlap 2968462 2968471 2968473, overlap 2968458 2968464 TCCGATTAAAATTAA CACTACATATAGTGTTTAC ATAATCA ATAAACACTATATGTAG-G CAATTAAGCGGCATC TERM 3738 2968504 - 2968464 - R 100 -13.7 -3.43546 | opp_overlap 2968462 2968471 2968473, overlap 2968458 2968462 CGATTAAAATTAACA CTACATATAGTGTTTAC ATAATCA ATAAACACTATATGTAG GCAATTAAGCGGCAT TERM 3739 2968529 - 2968509 - R 86 -11.9 -3.09193 | opp_overlap 2968507, overlap 2968513 ACTATATGTAGGCAA TTAAGCGGC ATC GCCGCCTAA AATTCCATGATCCAG TERM 3740 2968525 - 2968513 - R 78 -10.5 -3.3782 | opp_overlap 2968507, overlap 2968509 TATGTAGGCAATTAA GCGGC ATC GCCGC CTAAAATTCCATGAT TERM 3741 2968673 - 2968706 + r 100 -16.9 -4.09243 | opp_overlap 2968677, overlap 2968677 GGGAACCTATAACGG CAAAGGACCTTGGCT TAAA AGCCAAAGTCCTTTG TTTTAAAAAAATATA TERM 3742 2968702 - 2968677 - R 100 -14.1 -3.69621 | opp_overlap 2968673 2968677 ACCTATAACGGCAAA GGACCTTGGCT TAAA AGCCAAAGTCC TTTGTTTTAAAAAAA TERM 3743 2968677 - 2968702 + r 100 -11.9 -4.64861 | opp_overlap 2968677, overlap 2968673 ACCTATAACGGCAAA GGACCTTGGCT TAAA AGCCAAAGTCC TTTGTTTTAAAAAAA Shewmr7_2512 2969475 - 2968756 - | hypothetical protein Shewmr7_2513 2970508 - 2969561 - | patatin TERM 3744 2972165 - 2972144 - g 87 -7.2 -5.055 | CCAATGCGTAAAAAA CCTGCGGC GCCATT GCTGCAGG ATCATGACGACGAGC Shewmr7_2514 2970836 - 2972185 + | DEAD/DEAH box helicase domain-containing protein TERM 3745 2972528 - 2972509 - g 74 -8.6 -4.01411 | gap 1, opp_overlap 2972509 2972508 GAGCAAAAAGGCAAA CTGGCTGGC TCT GCCA-CCAG CTTTAAACTCGAAGC TERM 3746 2972680 - 2972666 - g 71 -11.4 -2.77192 | overlap 2972665 AACGCGTCCAACAAC CCGCCT TTG AGGCGG CCTACGCTCAGCAAA Shewmr7_2515 2972284 - 2972721 + | hypothetical protein TERM 3747 2972727 - 2972757 + F 100 -14.8 -3.91911 | opp_overlap 2972716, overlap 2972728 TAAAGCTTAAGCGTG TGAGCTTAGCGCAA CTG TAGCGCTAAGCTCG TTTCCTTCAGCTAGA TERM 3748 2972728 - 2972756 + F 100 -16.1 -2.94825 | opp_overlap 2972716, overlap 2972727 AAAGCTTAAGCGTGT GAGCTTAGCGCAA CTG TAGCGCTAAGCTC GTTTCCTTCAGCTAG Shewmr7_2516 2972777 - 2973286 + | hypothetical protein TERM 3749 2973689 - 2973664 - g 71 -6.9 -4.20367 | GCCCGCAAGAAACAA CTGAAATTAGC TAAG GCCCATTTCAG TGCCGCAAATGATAC TERM 3750 2973800 - 2973787 - g 84 -4.5 -5.24129 | overlap 2973789 CGTCCTTATAAAAAA TCCCC CTGC GGAGA CTGCCCAGCCTTAAA Shewmr7_2517 2973412 - 2973870 + | hypothetical protein TERM 3751 2974177 - 2974128 - T 100 -21.9 -3.12668 | opp_overlap 2974140, overlap 2974140 TATCGCTACACGCAA CACAAATAAAAACGCCGATGAAT CTAG ATTCATCGGCGTTTTTATTTTCG GTTAGCTCGGATTAA TERM 3752 2974165 - 2974140 - T 100 -16.3 -5.4659 | opp_overlap 2974140, overlap 2974128 CAACACAAATAAAAA CGCCGATGAAT CTAG ATTCATCGGCG TTTTTATTTTCGGTT TERM 3753 2974140 - 2974165 + T 100 -16.3 -5.49568 | opp_overlap 2974128 2974140 CAACACAAATAAAAA CGCCGATGAAT CTAG ATTCATCGGCG TTTTTATTTTCGGTT Shewmr7_2518 2975496 - 2974201 - | peptidase M23B Shewmr7_2519 2978819 - 2975763 - | SMC domain-containing protein TERM 3754 2976958 - 2976973 + g 71 -5.4 -4.43815 | overlap 2976959 TGCGCCAAAGTCGAC TCTTGC TGCT GCAAGG TTTTGATCTGTTGCT Shewmr7_2520 2980018 - 2978816 - | exodeoxyribonuclease I subunit D Shewmr7_2521 2981070 - 2980300 - | hypothetical protein TERM 3755 2980903 - 2980892 - G 95 -5.8 -5.41746 | AAGCTCGCAAAAAAA CTGC CACC GCAG GCCTGTAATTTGTTG Shewmr7_2522 2981158 - 2982120 + | LysR family transcriptional regulator TERM 3756 2982146 - 2982132 - T 100 -7.8 -5.24989 | opp_overlap 2982132 TTAGATAGCAAAAAA CCACCA GAG CGGTGG TTTTTAATGCTTATC TERM 3757 2982132 - 2982146 + T 85 -7.1 -4.8269 | opp_overlap 2982132 TTAGATAGCAAAAAA CCACC AGAGC GGTGG TTTTTAATGCTTATC Shewmr7_2523 2982559 - 2982173 - | hypothetical protein Shewmr7_2524 2982812 - 2982582 - | RNA-binding S4 domain-containing protein Shewmr7_2525 2983419 - 2982883 - | GCN5-related N-acetyltransferase TERM 3758 2983454 - 2983472 + r 80 -10.3 -3.48276 | opp_overlap 2983454 GATGAACTAAAAAAA TGGCAGC CAAAC GCTGCCA TTGTCTCGGCAAGAA TERM 3759 2983472 - 2983454 - R 100 -10.3 -5.65513 | opp_overlap 2983454 GATGAACTAAAAAAA TGGCAGC CAAAC GCTGCCA TTGTCTCGGCAAGAA Shewmr7_2526 2983771 - 2983493 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3760 2983944 - 2983889 - R 71 -4.2 -4.8622 | gap 2, overlap 2983897 CTGTTTAATTAAAAA GTC--TTAAACCGCGCCGTCATTGAT TTTGTT ATCGATAACGGCGCAGCATAATCGAC TCGTTATTAAGCCTT TERM 3761 2983934 - 2983897 - R 100 -12.8 -3.68853 | overlap 2983889 TTAAAAAGTCTTAAA CCGCGCCGTCATTGAT TTTGTT ATCGATAACGGCGCAG CATAATCGACTCGTT Shewmr7_2527 2985780 - 2983951 - | hypothetical protein TERM 3762 2984787 - 2984764 - G 80 -4.6 -5.18561 | TAAAGAGGCAAAAAA GGCTTTTAAG TCAC CTTTAAAACC CACTTGCTCACGGAC Shewmr7_2528 2985861 - 2986370 + | diguanylate cyclase TERM 3763 2986397 - 2986372 - T 91 -10.5 -4.23104 | opp_overlap 2986378, overlap 2986378 TTAAACTCCAATAAA GAAAAAGCCCC TTAC GGGGCTTTTTA GATCTGCATTGCGAA TERM 3764 2986378 - 2986391 + T 100 -9.5 -4.71061 | opp_overlap 2986378 2986372 TCCAATAAAGAAAAA GCCCC TTAC GGGGC TTTTTAGATCTGCAT TERM 3765 2986391 - 2986378 - T 100 -9.5 -5.47159 | opp_overlap 2986378, overlap 2986372 TCCAATAAAGAAAAA GCCCC TTAC GGGGC TTTTTAGATCTGCAT Shewmr7_2529 2987669 - 2986422 - | TPR repeat-containing protein TERM 3766 2986714 - 2986686 - G 70 -10.4 -2.87132 | gap 1, opp_overlap 2986686 2986685, overlap 2986688 GCCTTGTTTCAGATA CAGCTTGCCATCA TTGT TGATGGC-AGCCG CTTTTCCGTAAAACT Shewmr7_2530 2988295 - 2987672 - | TonB family protein Shewmr7_2531 2988701 - 2988297 - | biopolymer transport protein ExbD/TolR TERM 3767 2988544 - 2988554 + g 73 -5.4 -4.70353 | overlap 2988541 2988540 GAAGGCTTAGATGTC GCTT GTG AAGC TTTTGGTTTGTTGTA TERM 3768 2988738 - 2988755 + r 74 -4.9 -4.78661 | GCGGCATGCTGTCTT TTAGCTT TTCT AAGCTGA TTTTCATTTTTGCAT Shewmr7_2532 2989242 - 2988715 - | MotA/TolQ/ExbB proton channel Shewmr7_2533 2990597 - 2989242 - | MotA/TolQ/ExbB proton channel Shewmr7_2534 2991379 - 2990597 - | hypothetical protein TERM 3769 2991420 - 2991410 - R 78 -4 -5.13741 | TGAAGTGAATAAAAA GTTA ACT TAAC AGCAACATCACTTAA TERM 3770 2991572 - 2991555 - R 82 -8.5 -4.40804 | opp_overlap 2991538 CATCATTTCACAAAA TGTTGAC CTGT GTCAACA TTCGAGACACGTAAA TERM 3771 2991813 - 2991783 - R 100 -12.6 -4.5287 | overlap 2991784 CCAAATTAATTAAAA TGTGCGCTCGAAAA TAT TTCCCGAGCGCACC CAAACAAAGCTAACG TERM 3772 2991812 - 2991784 - R 100 -16.1 -3.30638 | overlap 2991783 CAAATTAATTAAAAT GTGCGCTCGAAAA TAT TTCCCGAGCGCAC CCAAACAAAGCTAAC Shewmr7_2535 2994748 - 2991848 - | TonB-dependent receptor TERM 3773 2994763 - 2994775 + r 72 -6.3 -4.35483 | TTGTCTATCTCCCTG GACAT ATT ATGTC TTTATTATAATCCGC TERM 3774 2994960 - 2994981 + r 100 -14.5 -5.55664 | opp_overlap 2994960 AGGCGCAAACAAAAA CGCCAGTCA TTGC TGACTGGCG TTTTTTTAGTACTGA TERM 3775 2994981 - 2994960 - R 100 -14.5 -5.27938 | opp_overlap 2994960 AGGCGCAAACAAAAA CGCCAGTCA TTGC TGACTGGCG TTTTTTTAGTACTGA Shewmr7_2536 2996241 - 2995033 - | porin TERM 3776 2995177 - 2995155 - G 79 -9.2 -4.14627 | CTTCGACATAAAGAA CTGTGTTTGG ATC CCAAACAAAG TGTAAACCTACAACC Shewmr7_2537 2998894 - 2996462 - | DNA polymerase II TERM 3777 2998968 - 2998952 - H 75 -5.1 -4.87592 | overlap 2998953 GGACACAGAATAAAA TTGCCAT AAA ATGGCAG AAAAGTTTCTTAGGC TERM 3778 2998967 - 2998953 - H 71 -8.6 -3.5147 | overlap 2998952 GACACAGAATAAAAT TGCCAT AAA ATGGCA GAAAAGTTTCTTAGG TERM 3779 2999082 - 2999126 + G 73 -6.4 -4.46212 | gap 1, opp_overlap 2999082 2999080 2999084, overlap 2999084 CGCTATCTATAAAGA TATTGC-CGCCGCTTTGCCTA ATTT TAGGCCACGCCGCGAGCAAAA TTTTATGGTGGCAGA TERM 3780 2999311 - 2999274 - g 83 -5.5 -5.1356 | gap 1, opp_overlap 2999302, overlap 2999276 CGCGAGTAAGAAAAA GGT-CTGTATCGCCACAG CAA CCGTGGCGCTGCAGGAGC AGTTGCTGCACAAAG dinG 2999035 - 3001107 + | ATP-dependent DNA helicase DinG TERM 3781 3001132 - 3001150 + G 71 -10.2 -3.14013 | overlap 3001131 TTGGAGTTGTTACTC GAGCCCAG TAA CTGGGCCC TGTTGGCTGTCATTG Shewmr7_2539 3001117 - 3001890 + | hypothetical protein Shewmr7_2540 3001881 - 3002549 + | primosomal replication protein N'', putative Shewmr7_2541 3002559 - 3003251 + | hypothetical protein Shewmr7_2542 3003257 - 3004159 + | histone deacetylase superfamily protein Shewmr7_2543 3004193 - 3004480 + | hypothetical protein TERM 3782 3004903 - 3004875 - T 79 -11.2 -3.16783 | gap 1, opp_overlap 3004875 3004882, overlap 3004882 TAGCTAAGTGAAAAT GATAAAAGCCTGC TAAT GCAGGCTTTT-TC TTATAAGGGCTCCAG TERM 3783 3004875 - 3004903 + T 81 -11.2 -3.30124 | gap 1, opp_overlap 3004875 3004882, overlap 3004882 TAGCTAAGTGAAAAT GATAAAAGCCTGC TAAT GCAGGCTTTT-TC TTATAAGGGCTCCAG TERM 3784 3004897 - 3004882 - T 100 -10.4 -4.67635 | opp_overlap 3004882 3004875, overlap 3004875 GTGAAAATGATAAAA GCCTGC TAAT GCAGGC TTTTTCTTATAAGGG TERM 3785 3004882 - 3004897 + T 100 -10.4 -5.18726 | opp_overlap 3004875 3004882, overlap 3004875 GTGAAAATGATAAAA GCCTGC TAAT GCAGGC TTTTTCTTATAAGGG Shewmr7_2544 3005311 - 3004946 - | helix-hairpin-helix repeat-containing competence protein ComEA TERM 3786 3005477 - 3005495 + r 75 -8.9 -3.65351 | opp_overlap 3005477 GTAATAAAACAAAAA GGATGTC ATTAA GACATCC TTTCGCTCAAAGTCC TERM 3787 3005495 - 3005477 - R 100 -8.9 -5.62288 | opp_overlap 3005477 GTAATAAAACAAAAA GGATGTC ATTAA GACATCC TTTCGCTCAAAGTCC Shewmr7_2545 3006712 - 3005519 - | methionine gamma-lyase TERM 3788 3006949 - 3006987 + r 82 -10.4 -3.60627 | opp_overlap 3006955 GCAGAAAATCAGCGA TAAAAATGCGCTAATGAC AGG GTCATTAGCGCATTAGCA TTTAGCCTAGAGTGC TERM 3789 3006981 - 3006955 - R 100 -18.2 -4.89339 | opp_overlap 3006949 AATCAGCGATAAAAA TGCGCTAATGAC AGG GTCATTAGCGCA TTAGCATTTAGCCTA Shewmr7_2546 3008229 - 3007027 - | hypothetical protein TERM 3790 3007522 - 3007504 - G 73 -10.2 -3.33815 | opp_overlap 3007514 ACTCGCGGCAAGCAA CACAGCCG ACT CGGCCGCG TATCGACGGACGATT TERM 3791 3007514 - 3007535 + g 100 -6.5 -5.41746 | gap 1, opp_overlap 3007504 AGCAACACAGCCGAC TCGGCCG-CG TAT CGACGGACGA TTTTTTTCGCCAGTT Shewmr7_2547 3009686 - 3008226 - | protein of unknown function DUF463, YcjX family protein TERM 3792 3008959 - 3008946 - G 86 -5.9 -5.09173 | TAACAGCGGAAAAAA CGCCA GCAG CGGCG CGCCCTCCCATTCAC TERM 3793 3009770 - 3009753 - R 84 -9.8 -3.84915 | opp_overlap 3009753 GAGATTAAGCAACAA GGGCGG ACATGG CCGCCC TTTAGAGGGATTACA TERM 3794 3009753 - 3009770 + r 78 -9.8 -3.55622 | opp_overlap 3009753 GAGATTAAGCAACAA GGGCGG ACATGG CCGCCC TTTAGAGGGATTACA Shewmr7_2548 3010167 - 3009781 - | phage shock protein C, PspC pspB 3010387 - 3010154 - | phage shock protein B Shewmr7_2550 3011095 - 3010412 - | phage shock protein A, PspA TERM 3795 3011279 - 3011269 - H 78 -4 -5.2189 | CTAACGACTAAAAAA TATC GTG GATA ATAAATTTCAGCAAG Shewmr7_2551 3011273 - 3012361 + | Fis family transcriptional regulator TERM 3796 3012939 - 3012955 + G 70 -3 -4.8667 | gap 1, overlap 3012924 3012939 3012941 TCATCTTTCGTTTAG C-ACGCA AAGA TGCGTCG TTTTTATCAAATCTA TERM 3797 3013110 - 3013099 - g 70 -4.4 -4.63527 | GCATTACGCCAAAAA CGAA TATG TTCG CTATCGCCGCAATCC Shewmr7_2552 3012431 - 3014056 + | extracellular solute-binding protein TERM 3798 3014594 - 3014584 - g 86 -8.2 -4.5954 | opp_overlap 3014583 3014579 3014577, overlap 3014579 TTATATGAGATAAAA CCCG TTA CGGG ATTTATGTTGGTCGA Shewmr7_2553 3014056 - 3015087 + | binding-protein-dependent transport systems inner membrane component Shewmr7_2554 3015074 - 3015964 + | binding-protein-dependent transport systems inner membrane component Shewmr7_2555 3015968 - 3016975 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Shewmr7_2556 3016956 - 3017741 + | ABC transporter related Shewmr7_2557 3017787 - 3019049 + | trans-2-enoyl-CoA reductase TERM 3799 3019077 - 3019094 + F 100 -12.7 -5.33405 | opp_overlap 3019077 ATAATTTATGTAAAA CGCCACC CTTG GGTGGCG TTTTTATTTGCTGCA TERM 3800 3019094 - 3019077 - f 100 -12.7 -4.21676 | opp_overlap 3019077 ATAATTTATGTAAAA CGCCACC CTTG GGTGGCG TTTTTATTTGCTGCA Shewmr7_2558 3019165 - 3019377 + | molybdenum-pterin binding protein TERM 3801 3019428 - 3019457 + T 93 -12.3 -3.1585 | opp_overlap 3019433, overlap 3019433 TGTAACCAGACAAAC AAAAAGGCCAAGT GAAC ACTTGGCCTTTTC TATTAGATTCGCTAA TERM 3802 3019452 - 3019433 - T 100 -12.2 -5.42975 | opp_overlap 3019433 3019428 CCAGACAAACAAAAA GGCCAAGT GAAC ACTTGGCC TTTTCTATTAGATTC TERM 3803 3019433 - 3019452 + T 100 -12.2 -4.7033 | opp_overlap 3019433, overlap 3019428 CCAGACAAACAAAAA GGCCAAGT GAAC ACTTGGCC TTTTCTATTAGATTC TERM 3804 3019519 - 3019495 - T 91 -10.2 -4.07885 | opp_overlap 3019498, overlap 3019498 TATTGCTTCGTAAAA TAAGGGATAA GCAAG TTATCCCTTA TCGCAATTAACCTTC TERM 3805 3019516 - 3019498 - T 73 -7.5 -4.17048 | opp_overlap 3019498, overlap 3019495 TGCTTCGTAAAATAA GGGATAA GCAAG TTATCCC TTATCGCAATTAACC Shewmr7_2559 3021391 - 3019526 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3806 3021367 - 3021328 - G 76 -5 -4.90471 | gap 1, opp_overlap 3021362 3021366 ATGCAAAAGATAAAA TCACAAGTACGAGAATGCC TTT AGCAATCACGC-CTTGCGA ACCGTCGCGGATCTT TERM 3807 3021450 - 3021428 - R 100 -10.6 -5.62288 | opp_overlap 3021428 TTAACAAAATAAAAA GGCGCATC AATTTGA GATGCGCC TTTCTGTAATTTATG TERM 3808 3021428 - 3021450 + r 91 -10.6 -4.19123 | opp_overlap 3021428 TTAACAAAATAAAAA GGCGCATC AATTTGA GATGCGCC TTTCTGTAATTTATG TERM 3809 3021576 - 3021559 - R 100 -9.9 -4.62471 | opp_overlap 3021559 TTCAATTCGTAAAAA GCACTGT TTAA ACAGTGC TTATCATTACGAACG TERM 3810 3021559 - 3021576 + r 78 -9.9 -3.50853 | opp_overlap 3021559 TTCAATTCGTAAAAA GCACTGT TTAA ACAGTGC TTATCATTACGAACG Shewmr7_2560 3021890 - 3021618 - | histone family protein DNA-binding protein TERM 3811 3021644 - 3021664 + g 72 -3.9 -4.77036 | overlap 3021646 CGTCTTTCAGAGCTT TACCAGCTT TGA ATGCTGGAA TTTTTGCTGCTGCGA TERM 3812 3022063 - 3022032 - R 100 -17.4 -3.65425 | TGGATACAGCTCAAA GCCAGTTGCGCCAA GGGC TTGGAGCAACTGGC TCTCCACAGACCTAG Shewmr7_2561 3024507 - 3022150 - | Lon-A peptidase TERM 3813 3024608 - 3024592 - R 100 -10.1 -6.09196 | opp_overlap 3024588 3024592 GTCAAAATAAAAAAA GGAGCCC GAT GGACTCC TTGATTTTCAGATTA TERM 3814 3024592 - 3024608 + r 70 -7.9 -3.69437 | opp_overlap 3024592, overlap 3024588 GTCAAAATAAAAAAA GGAGCCC GAT GGACTCC TTGATTTTCAGATTA clpX 3025920 - 3024640 - | ATP-dependent protease ATP-binding subunit clpP 3026628 - 3026020 - | ATP-dependent Clp protease proteolytic subunit TERM 3815 3026320 - 3026302 - G 80 -4.4 -5.06816 | overlap 3026303 ACCGGCTAATAAAAA GGCGCCCA TGC TGGCCGCT TGACCAATACACACA TERM 3816 3026680 - 3026651 - R 100 -17.3 -5.27335 | opp_overlap 3026651, overlap 3026677 TTCCCTAAATAAAAA TGGCTCGCATGAG GAGC CTCATACGAGCCA TTATAAATGGCGAAC TERM 3817 3026651 - 3026680 + r 100 -15.1 -3.35679 | opp_overlap 3026651 3026677 TTCCCTAAATAAAAA TGGCTCGCATGAG GAGC CTCATACGAGCCA TTATAAATGGCGAAC tig 3028022 - 3026718 - | trigger factor TERM 3818 3026816 - 3026835 + g 74 -7.8 -4.19258 | opp_overlap 3026806, overlap 3026819 CAACAGCTTGCTCTT CAAGCGCA ACGT TGCGCATG TTTTGCATCAGCTCT TERM 3819 3028238 - 3028252 + H 100 -11.4 -6.14618 | opp_overlap 3028238 TAGGGTATAAAAAAA GCGACC AGA GGTCGC TTTTTTTATTTTGTA TERM 3820 3028252 - 3028238 - H 100 -11.4 -5.626 | opp_overlap 3028238 TAGGGTATAAAAAAA GCGACC AGA GGTCGC TTTTTTTATTTTGTA TERM 3821 3028848 - 3028863 + H 88 -6.8 -5.14985 | opp_overlap 3028847 TAGATGCTGAATTAT CAGGCG AATA TGCCTG TTTTTATCTATTTCG TERM 3822 3029662 - 3029628 - g 74 -10.1 -3.53012 | gap 1, opp_overlap 3029616 GTTGCCGTGGGTAAA CCCGGCTTTATCC-CT GGAG AGTGGATTAAGCCAGG CGCGATCGTTATCGA Shewmr7_2565 3028992 - 3029846 + | methenyltetrahydrofolate cyclohydrolase TERM 3823 3030012 - 3029998 - T 100 -11.4 -5.69473 | opp_overlap 3029998 GAGACCATAAAAAAA CCTGCC ATT GGCAGG TTTTTTTATTATCGA TERM 3824 3029998 - 3030012 + T 100 -11.4 -5.88565 | opp_overlap 3029998 GAGACCATAAAAAAA CCTGCC ATT GGCAGG TTTTTTTATTATCGA cysS 3031455 - 3030070 - | cysteinyl-tRNA synthetase TERM 3825 3031825 - 3031811 - g 70 -8.6 -3.762 | opp_overlap 3031805, overlap 3031803 AAACGAAGCCAACAA CGGTTT ATC AAACCG TACTGGTACTATCGC Shewmr7_2567 3031590 - 3032081 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type Shewmr7_2568 3032091 - 3032810 + | UDP-2,3-diacylglucosamine hydrolase Shewmr7_2569 3033690 - 3032920 - | tRNA hydroxylase TERM 3826 3034050 - 3034015 - g 76 -8.3 -4.22214 | overlap 3034041 ACTCATCCAAAACAA GAGTGGCACGCGATT GAGAAG AATCACGAGGCACTC AAAAGTAGCTTAAGT Shewmr7_2570 3033970 - 3034566 + | hypothetical protein TERM 3827 3034702 - 3034665 - T 84 -10.7 -3.68674 | opp_overlap 3034670, overlap 3034670 AAAAGTTGTAAAACA GAAAAGGCCCTTAGCTT GAAA ACACTAAGGGCCTTTTT ATTCTTTACTGCAGT TERM 3828 3034697 - 3034670 - T 100 -10.6 -4.89567 | opp_overlap 3034670, overlap 3034665 TTGTAAAACAGAAAA GGCCCTTAGCTT GAAA ACACTAAGGGCC TTTTTATTCTTTACT TERM 3829 3034670 - 3034697 + T 100 -8.5 -5.39905 | opp_overlap 3034670 3034665 TTGTAAAACAGAAAA GGCCCTTAG CTTGAAAACA CTAAGGGCC TTTTTATTCTTTACT Shewmr7_2571 3036430 - 3034760 - | glutaminyl-tRNA synthetase TERM 3830 3035056 - 3035075 + g 71 -5 -4.57073 | gap 1 GGATTACGCCTTTCA CCTTG-CGA CCA TCGGCAGGG TTTTTACCCAAGGTA TERM 3831 3035655 - 3035642 - G 76 -6.7 -4.47551 | overlap 3035633 3035644 ATTTAAGCGAGAAAA CTCGT ACTG ACGAG TACGGTTCGGCGCTT TERM 3832 3036574 - 3036548 - R 100 -10.3 -4.29302 | opp_overlap 3036547 3036553, overlap 3036553 TGGATAGTAAAACAA TAAAAGCAGCC ATGAA AGCTGCTTTTA CCTTTGTCATCACTA TERM 3833 3036569 - 3036553 - R 85 -5.8 -5.10656 | opp_overlap 3036547 3036553, overlap 3036548 AGTAAAACAATAAAA GCAGCC ATGAA AGCTGC TTTTACCTTTGTCAT Shewmr7_2572 3038907 - 3036613 - | ferrous iron transport protein B Shewmr7_2573 3039139 - 3038900 - | FeoA family protein TERM 3834 3039614 - 3039597 - g 76 -8.5 -4.24002 | opp_overlap 3039597 GGTTAAAGTTCAAAA GCATAAC TCAG GTTATGC TTGTTGTGATGTTAT TERM 3835 3039597 - 3039614 + G 72 -8.5 -3.89893 | opp_overlap 3039597 GGTTAAAGTTCAAAA GCATAAC TCAG GTTATGC TTGTTGTGATGTTAT Shewmr7_2574 3039566 - 3040531 + | cytochrome C family protein TERM 3836 3041558 - 3041527 - g 74 -6.5 -4.30576 | opp_overlap 3041527, overlap 3041528 CGGGTATCAGCAAAA TGTCGCAGGATGA GGCTTT TCTTCCCGCGACC ATTAATGGCCCCTCC TERM 3837 3041714 - 3041704 - g 76 -3.2 -5.11836 | ACAGGGAAAACAAAA CAGC TCA ACTG GATTTCCCACAGGTC TERM 3838 3042611 - 3042584 - g 73 -5.6 -4.67038 | gap 1, opp_overlap 3042590, overlap 3042587 CTGGCAAAACCAAAA CACCACTTGGGAC ACA GTCCCCAATG-TG CTCAGTTTTGGCGAT Shewmr7_2575 3040545 - 3042683 + | outer membrane protein, putative Shewmr7_2576 3042719 - 3044638 + | decaheme cytochrome c MtrF Shewmr7_2577 3044885 - 3047080 + | decaheme cytochrome c TERM 3839 3047120 - 3047140 + F 100 -11.2 -5.93252 | opp_overlap 3047120 GAGACTGGACAAAAA GAGAGAGG TAACC CCTCTCTC TTTTTTATTTTTCAC TERM 3840 3047140 - 3047120 - f 100 -11.2 -4.8667 | opp_overlap 3047120 GAGACTGGACAAAAA GAGAGAGG TAACC CCTCTCTC TTTTTTATTTTTCAC Shewmr7_2578 3047412 - 3049364 + | decaheme cytochrome c TERM 3841 3049377 - 3049394 + F 100 -12.7 -4.3351 | opp_overlap 3049377, overlap 3049369 TAATTTGCCCAAGCA GGGGGAG TTCG CTCCCCC TTTCTTGAATTTTGT TERM 3842 3049394 - 3049377 - f 88 -12.7 -2.71681 | opp_overlap 3049369 3049377 TAATTTGCCCAAGCA GGGGGAG TTCG CTCCCCC TTTCTTGAATTTTGT TERM 3843 3049666 - 3049640 - g 76 -7.4 -4.30987 | overlap 3049642 3049649 3049651 3049653 ATGTGCCACAAGAAA TCCGAAAAAGTC ATG GACCTTTTCAAA GGCGTCCACGGCGCC Shewmr7_2579 3049433 - 3050422 + | cytochrome C family protein TERM 3844 3050684 - 3050665 - g 71 -5 -4.56597 | CTTTGGCTCTAAAAA CGAAGTTG CGGG CAAGTTCG ATGCGGACCTTGCCT Shewmr7_2580 3050435 - 3052522 + | outer membrane protein precursor MtrB TERM 3845 3052565 - 3052541 - f 91 -12.9 -2.61264 | opp_overlap 3052546, overlap 3052546 GCGTTTATTGATAAT CAAAAGCCCGC ACT GCGGGCTTTTT TATTGCCAACTAACA TERM 3846 3052546 - 3052560 + F 100 -12.8 -5.4505 | opp_overlap 3052541 3052546 TATTGATAATCAAAA GCCCGC ACT GCGGGC TTTTTTATTGCCAAC TERM 3847 3052560 - 3052546 - f 100 -12.8 -4.50058 | opp_overlap 3052546, overlap 3052541 TATTGATAATCAAAA GCCCGC ACT GCGGGC TTTTTTATTGCCAAC Shewmr7_2581 3052742 - 3053356 + | hypothetical protein TERM 3848 3053404 - 3053394 - g 70 -8.2 -3.66999 | opp_overlap 3053397, overlap 3053395 AGCTATCGAGCCAAA CGGC TCA GCCG AGCTCAGTGTATTGC Shewmr7_2582 3053356 - 3054078 + | phage SPO1 DNA polymerase domain-containing protein TERM 3849 3054117 - 3054103 - T 100 -8.5 -5.11112 | opp_overlap 3054103 AAATCCCAATAAAAA GCCCC ATTAA GGGGC TTATAGACTGGAACT Shewmr7_2583 3055719 - 3054217 - | vibriolysin TERM 3850 3056181 - 3056206 + G 85 -12 -3.66732 | opp_overlap 3056170 3056181 CAAACCCGGCATCAA TTTGCCCTTG CATTAT CAAGGGCAAA TTATTGGGGTGATTG TERM 3851 3056206 - 3056181 - g 77 -12 -3.16055 | opp_overlap 3056181, overlap 3056170 CAAACCCGGCATCAA TTTGCCCTTG CATTAT CAAGGGCAAA TTATTGGGGTGATTG Shewmr7_2584 3055951 - 3057183 + | CdaR family transcriptional regulator TERM 3852 3057254 - 3057239 - f 71 -4.8 -4.73613 | TTACTAGCAATAAAA TCAATT AATT AATTGA TAGCTGCTGACTCTA Shewmr7_2585 3057437 - 3058435 + | catalase domain-containing protein TERM 3853 3058530 - 3058493 - f 100 -16.5 -2.54523 | overlap 3058522 3058525 TTACATTCGAATTCA CGGCCATTATTTTGTGC ACAC GCACAAAATAAGGGCCA TTCCCGCCCGTAATT TERM 3854 3058641 - 3058604 - f 73 -8.5 -3.60296 | opp_overlap 3058591 3058600, overlap 3058591 TAGGCTGACCTTAAA GCAGCCTTTATTTGGAC TTGG GATCAAATAAAGACCGC GCCCTACAAAAACAG TERM 3855 3059658 - 3059674 + G 73 -11.5 -3.01712 | opp_overlap 3059648, overlap 3059645 AATCACCGGTGCCGG CGGTGCC TTC GGCGCCG TGTTAAAAGCCACGC Shewmr7_2586 3058702 - 3060060 + | gluconate transporter TERM 3856 3060049 - 3060067 + F 93 -8.8 -4.51097 | opp_overlap 3060044, overlap 3060037 TATGTACTAAGCTTA GTGCTGCT CTA AGCCGCAC TTTTCTCATCCTTGG Shewmr7_2587 3060119 - 3061264 + | glycerate kinase TERM 3857 3061338 - 3061313 - f 81 -11.9 -2.51223 | opp_overlap 3061313 3061317, overlap 3061310 3061308 3061317 CCTAACAACACACAC CCAAGGCGCTA TTCA TAGCGCCTTTG TTTATTCTATAACCC TERM 3858 3061313 - 3061338 + F 100 -11.9 -4.38927 | opp_overlap 3061313 3061310 3061308 3061317, overlap 3061317 CCTAACAACACACAC CCAAGGCGCTA TTCA TAGCGCCTTTG TTTATTCTATAACCC TERM 3859 3061317 - 3061334 + F 100 -11.3 -4.76087 | opp_overlap 3061317 3061313 3061310 3061308, overlap 3061313 ACAACACACACCCAA GGCGCTA TTCA TAGCGCC TTTGTTTATTCTATA TERM 3860 3061334 - 3061317 - f 84 -11.3 -3.19657 | opp_overlap 3061313 3061317, overlap 3061313 3061310 3061308 ACAACACACACCCAA GGCGCTA TTCA TAGCGCC TTTGTTTATTCTATA Shewmr7_2588 3061519 - 3063168 + | pyridoxal-dependent decarboxylase TERM 3861 3063219 - 3063252 + T 100 -16.9 -3.54424 | opp_overlap 3063225, overlap 3063225 ATACAGAGAGTTAAT CACAAACAGCCGCAA ATAT TTGCGGCTGTTTTTG TTTGCAGAGCTGGGA TERM 3862 3063246 - 3063225 - T 100 -14.5 -4.07306 | opp_overlap 3063225 3063219 AGAGTTAATCACAAA CAGCCGCAA ATAT TTGCGGCTG TTTTTGTTTGCAGAG TERM 3863 3063225 - 3063246 + T 100 -14.5 -5.27335 | opp_overlap 3063225, overlap 3063219 AGAGTTAATCACAAA CAGCCGCAA ATAT TTGCGGCTG TTTTTGTTTGCAGAG Shewmr7_2589 3064558 - 3063662 - | NAD-dependent DNA ligase TERM 3864 3065001 - 3065011 + H 73 -8.2 -3.61178 | opp_overlap 3065001 3065000 3064990 ATAAGGACGCTAAAT GCCC AAG GGGC TTTCAACTCCGTAGG TERM 3865 3065073 - 3065105 + H 71 -4.2 -4.89063 | gap 2, overlap 3065077 GAGCAGTCCTCCTTG GTCGG-GT-GTGGGGT GAA GCCCCACGACTTTGAC TTTGTTTTTAAATAA TERM 3866 3065077 - 3065099 + H 74 -7.6 -4.00308 | overlap 3065073 AGTCCTCCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTGACTTTGTTTTT Shewmr7_2590 3065309 - 3065773 + | hypothetical protein TERM 3867 3066050 - 3066060 + G 72 -8.2 -3.87641 | TTGATAAAGCCAGTT GGCG CAG CGCC TTTATCCGCAATATT TERM 3868 3066210 - 3066196 - g 77 -10 -3.6968 | opp_overlap 3066196 3066195 3066193 3066198, overlap 3066188 GGACAATGGCAACAA GAGCAG CCC CTGCTC GTCTTATTTGGCTTT Shewmr7_2591 3065809 - 3066264 + | hypothetical protein Shewmr7_2592 3066342 - 3066752 + | hypothetical protein Shewmr7_2593 3066803 - 3067477 + | streptogramin A acetyl transferase Shewmr7_2594 3067636 - 3068472 + | AraC family transcriptional regulator TERM 3869 3068873 - 3068886 + G 76 -3.1 -5.06816 | gap 1, overlap 3068875 TACCACTCAAATGGC GCCTCA CTC TG-GGC TTTTTATTGACCGAT Shewmr7_2595 3068611 - 3069306 + | AzlC family protein TERM 3870 3069385 - 3069407 + G 70 -2.7 -4.8143 | gap 1, overlap 3069385 CAAAATTGCCGCTAA GG-CTGAGTA AAAA TACCCAGACC TTTTTGAGTTATTCG Shewmr7_2596 3069303 - 3069605 + | branched-chain amino acid transport Shewmr7_2597 3070953 - 3069595 - | major facilitator transporter Shewmr7_2598 3072244 - 3071060 - | N-acetylglucosamine 6-phosphate deacetylase Shewmr7_2599 3073160 - 3072234 - | N-acetylglucosamine kinase Shewmr7_2600 3074341 - 3073181 - | sugar isomerase (SIS) Shewmr7_2601 3075635 - 3074349 - | tagatose-bisphosphate aldolase noncatalytic subunit TERM 3871 3074713 - 3074699 - G 71 -11.4 -2.71791 | opp_overlap 3074711 3074712, overlap 3074698 AGCTTTGGCGTAAAT CCGAGC ATT GCTCGG GCTGGCACAGCACAT Shewmr7_2602 3077011 - 3075641 - | twin-arginine translocation pathway signal Shewmr7_2603 3077809 - 3077024 - | DeoR family transcriptional regulator TERM 3872 3077225 - 3077236 + g 76 -5.8 -4.60041 | ACACATCATTCGGTT GAGG CTGG CCTC TTTTTCAAAGTGAGT TERM 3873 3078195 - 3078163 - g 79 -12 -3.27476 | gap 1 ACTCTTAACCACCAA GCCTGCCGCGATTGC CCTA GCCATCGCAGC-GGC TCTGACAGCAACTCA TERM 3874 3080979 - 3080947 - g 77 -12.7 -2.79952 | opp_overlap 3080971, overlap 3080944 3080939 3080971 AGACCAAGTGAATTA CCTAGAGCGTTTTGG CAC CCAAATCGCCCTCGG GATCCGCGGCAGTTT Shewmr7_2604 3078143 - 3080998 + | TonB-dependent receptor TERM 3875 3081022 - 3081046 + T 100 -15.9 -4.66833 | opp_overlap 3081026, overlap 3081026 TAAAGTTAATCACCA TAAAGCCACTC TAT GAGTGGCTTTA TTTTTCGGCTTCACG TERM 3876 3081026 - 3081042 + T 100 -12.3 -4.88293 | opp_overlap 3081026, overlap 3081022 GTTAATCACCATAAA GCCACTC TAT GAGTGGC TTTATTTTTCGGCTT TERM 3877 3081042 - 3081026 - T 100 -12.3 -4.02022 | opp_overlap 3081022 3081026 GTTAATCACCATAAA GCCACTC TAT GAGTGGC TTTATTTTTCGGCTT Shewmr7_2605 3081742 - 3081044 - | helix-turn-helix, type 11 domain-containing protein TERM 3878 3081257 - 3081271 + g 71 -7.1 -4.20749 | GAGCGGCCGCACTTC GCGCT CGGTC AGCGC TTTATTCACATCTTG Shewmr7_2606 3082302 - 3081853 - | transcription activator, effector binding protein TERM 3879 3082458 - 3082437 - R 95 -12.3 -3.28146 | AAAAATCAGTACCAA GAGCCGTGC CAAG GCACGACTC TGCAGAGTTTACATT Shewmr7_2607 3082855 - 3082472 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3880 3082972 - 3082939 - R 100 -12.6 -5.01823 | opp_overlap 3082942, overlap 3082942 ACAACAAGAATAAAA CAAGGCTACTGACA ACATCA TGTCAGTAGCCTTT GAGTGAAGCTGATTT TERM 3881 3082942 - 3082969 + r 100 -14.3 -3.65351 | opp_overlap 3082939 3082942 ACAAGAATAAAACAA GGCTACTGACA ACATCA TGTCAGTAGCC TTTGAGTGAAGCTGA TERM 3882 3082969 - 3082942 - R 100 -14.3 -4.55653 | opp_overlap 3082942, overlap 3082939 ACAAGAATAAAACAA GGCTACTGACA ACATCA TGTCAGTAGCC TTTGAGTGAAGCTGA TERM 3883 3082996 - 3083008 + r 80 -9.1 -3.96483 | CTGATTTTATTGAGT GCGCT AAA AGCGC TTATTTAGGTAGGCT Shewmr7_2608 3084730 - 3083009 - | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 3884 3083628 - 3083646 + g 74 -7.4 -4.18018 | overlap 3083629 GTGGTATAACTTTCA ACGCCAAA GCC TTTGGCGA TTTTAGATAACAGAC TERM 3885 3083629 - 3083645 + g 71 -10.9 -3.10597 | overlap 3083628 TGGTATAACTTTCAA CGCCAAA GCC TTTGGCG ATTTTAGATAACAGA TERM 3886 3083833 - 3083846 + g 79 -6.7 -4.74103 | CATTGGCGCAGGCGA GCATG GCAC CATGC TTTTTCGCTTCGGCG Shewmr7_2609 3085311 - 3085006 - | hypothetical protein TERM 3887 3085737 - 3085709 - R 100 -16.1 -3.00441 | opp_overlap 3085714, overlap 3085714 AAGGGATAACCAAAG GAAAACTGGCGCC CTA GGCGCCAGTTTTA TCAATAAAAACATTA TERM 3888 3085714 - 3085732 + r 100 -16 -4.42386 | opp_overlap 3085709 3085714 ATAACCAAAGGAAAA CTGGCGCC CTA GGCGCCAG TTTTATCAATAAAAA TERM 3889 3085732 - 3085714 - R 100 -16 -4.62957 | opp_overlap 3085714, overlap 3085709 ATAACCAAAGGAAAA CTGGCGCC CTA GGCGCCAG TTTTATCAATAAAAA Shewmr7_2610 3086733 - 3085750 - | integral membrane protein TerC TERM 3890 3086771 - 3086758 - R 74 -8.1 -4.04549 | overlap 3086756 TAAAATCTAAAAATA CCGAG TTTT CTCGG CCTCATCGCCACGTT TERM 3891 3087071 - 3087053 - R 86 -6.6 -4.98436 | opp_overlap 3087053, overlap 3087057 CTAAGACGATAAAAA GCGAGCTG TTT CAGCGCAC TGTGTAACACTTGAG Shewmr7_2611 3087442 - 3087203 - | hypothetical protein Shewmr7_2612 3088646 - 3087519 - | 3-beta hydroxysteroid dehydrogenase/isomerase Shewmr7_2613 3090616 - 3088790 - | peptide synthase TERM 3892 3090402 - 3090414 + g 79 -7.7 -4.55295 | opp_overlap 3090402 3090401 GCATTGAGCGCAAAG GCGAT GGC ATCGC TTTGTTTATCGAGGC Shewmr7_2614 3091635 - 3090616 - | alpha/beta hydrolase fold TERM 3893 3091718 - 3091680 - R 100 -9.7 -5.4111 | gap 1, overlap 3091670 AATAAGCATAAAAAA TGCCCTAGCAAAC-CTTG CTCT CAAGCGTCGGCTAAGGCA GATAACAATCTTGGA Shewmr7_2615 3092786 - 3091737 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3894 3092816 - 3092832 + r 89 -7.3 -5.03201 | opp_overlap 3092811 3092816, overlap 3092811 CGCTCACTAAGATCA CTGATCT TTT AGGTCAG TTTTTAGTTGTTATT Shewmr7_2616 3094408 - 3093041 - | hypothetical protein Shewmr7_2617 3094696 - 3094929 + | hypothetical protein TERM 3895 3094917 - 3094947 + T 86 -7.6 -4.59117 | opp_overlap 3094924, overlap 3094923 3094924 CGAGGCACGACTTGC GAAAAAAGCCTGAG AAT TTCAGGCCTTTTAC TTTTATCGTTACTTT TERM 3896 3094923 - 3094941 + T 73 -5.2 -4.74012 | opp_overlap 3094924, overlap 3094917 3094924 ACGACTTGCGAAAAA AGCCTGAG AAT TTCAGGCC TTTTACTTTTATCGT TERM 3897 3094924 - 3094940 + T 73 -8.7 -3.4278 | opp_overlap 3094924, overlap 3094923 3094917 CGACTTGCGAAAAAA GCCTGAG AAT TTCAGGC CTTTTACTTTTATCG TERM 3898 3094940 - 3094924 - T 95 -8 -5.02074 | opp_overlap 3094923 3094917 3094924 CGACTTGCGAAAAAA GCCTGA GAATT TCAGGC CTTTTACTTTTATCG Shewmr7_2618 3095318 - 3094956 - | hypothetical protein TERM 3899 3095385 - 3095349 - R 100 -8.9 -5.03715 | gap 1, opp_overlap 3095349 3095347 3095350, overlap 3095350 ATTACCCCTAAAAAA GTGCCCCAAGG-ATAA TCCGAG TTATTCCTTGGGGCAA TATTTCTGAACGCAA TERM 3900 3095349 - 3095385 + r 76 -9.6 -3.51934 | gap 1, opp_overlap 3095349 3095350, overlap 3095347 3095350 ATTACCCCTAAAAAA GTGCCCCAAGG-ATAAT CCGA GTTATTCCTTGGGGCAA TATTTCTGAACGCAA TERM 3901 3095384 - 3095350 - R 100 -12.4 -3.61506 | gap 1, opp_overlap 3095350 3095349 3095347, overlap 3095349 TTACCCCTAAAAAAG TGCCCCAAGG-ATAA TCCGAG TTATTCCTTGGGGCA ATATTTCTGAACGCA TERM 3902 3095350 - 3095384 + r 91 -13.1 -2.70946 | gap 1, opp_overlap 3095349 3095350, overlap 3095349 3095347 TTACCCCTAAAAAAG TGCCCCAAGG-ATAAT CCGA GTTATTCCTTGGGGCA ATATTTCTGAACGCA Shewmr7_2619 3097382 - 3095406 - | choline/carnitine/betaine transporter TERM 3903 3096181 - 3096155 - G 73 -5.9 -4.51743 | gap 1, opp_overlap 3096175, overlap 3096175 TGACCACTAAACAAA TCCCA-ATCCCC GACA GGAGATGCGGGA ACGGCATATGTTCAA TERM 3904 3096614 - 3096593 - G 76 -7.3 -4.29049 | opp_overlap 3096595, overlap 3096601 3096611 TAAGCAGCAAAATAA GAGCTAAAC CTAA GTTAAGCTC ACTTAAGCGTTTTAC TERM 3905 3097975 - 3097955 - R 100 -14.1 -5.33785 | AATCAGCATAAAAAA TGGCGACTT GTT AAGTCGCCA CAAAATTGTATCACA TERM 3906 3098041 - 3098017 - R 90 -7.2 -5.09225 | opp_overlap 3098017 ATTTGATGCAAAAAA CCAAAACCAA CTTAT TCGGCTTTGG CTTTTACCGTTGCCG Shewmr7_2620 3098633 - 3098028 - | hypothetical protein TERM 3907 3098685 - 3098667 - H 82 -2.4 -5.70829 | overlap 3098668 AATAGGATAAAAAAA GGCATAAA TTG TTTACGCT AAAAAGCGCGTTAAA Shewmr7_2621 3098789 - 3099184 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3908 3099385 - 3099395 + G 73 -3.2 -4.9725 | overlap 3099377 3099379 GTTGTAGCCGCGTGG TGCG CCG TGCA TTTTTATGTGGCGAT Shewmr7_2622 3099333 - 3100292 + | hypothetical protein TERM 3909 3100685 - 3100667 - g 74 -3.8 -4.98255 | overlap 3100670 TTCCAATTAGAAAAA GCAGAAGA TAT TCTTCAAC CTAAATATCGAGGTG Shewmr7_2623 3100568 - 3100942 + | hypothetical protein TERM 3910 3101215 - 3101188 - T 88 -12.6 -2.65264 | TGATTAGCGAGACGA CCGTCCGCCCCA TGGA CGGGGCGGTCGA GCATCCACGGATGGA TERM 3911 3101363 - 3101330 - T 100 -14 -3.53091 | opp_overlap 3101336, overlap 3101336 ATTTCCCCCCCTAAA CAAAAACGCTCTGC GATTAG GCAGAGCGTTTGTG GATAAAGCCGTGTGA TERM 3912 3101357 - 3101336 - T 100 -11.6 -5.27335 | opp_overlap 3101336, overlap 3101330 CCCCCTAAACAAAAA CGCTCTGC GATTAG GCAGAGCG TTTGTGGATAAAGCC TERM 3913 3101336 - 3101357 + T 100 -11.6 -3.91897 | opp_overlap 3101336 3101330 CCCCCTAAACAAAAA CGCTCTGC GATTAG GCAGAGCG TTTGTGGATAAAGCC Shewmr7_2624 3102099 - 3101389 - | transcriptional regulator PhoU TERM 3914 3101697 - 3101710 + g 71 -6.7 -4.21462 | opp_overlap 3101694 GCAGCATACGAATCG CATGG CGGC CCATG TTTTCAATGCTAACT Shewmr7_2625 3103045 - 3102227 - | phosphate ABC transporter, ATPase subunit TERM 3915 3102720 - 3102750 + g 95 -5.3 -5.67063 | opp_overlap 3102720, overlap 3102721 3102724 CGCTGGAACACCATA CCTACGTTGCGGC GCAAG GCGGCAACGTCGA TTTTTTTGTCATAAA TERM 3916 3102721 - 3102749 + g 77 -8.8 -3.99153 | opp_overlap 3102720, overlap 3102720 3102724 GCTGGAACACCATAC CTACGTTGCGGC GCAAG GCGGCAACGTCG ATTTTTTTGTCATAA Shewmr7_2626 3104737 - 3103079 - | phosphate ABC transporter, inner membrane subunit PstA TERM 3917 3103680 - 3103732 + g 83 -5.6 -5.09173 | gap 2, opp_overlap 3103679 CCGTACACAATCGAT GGCACACCCGCTAAGTTGATCACCGC AAT GCG--GATCATCTTAGTGATTGGGCC TTTTTTGGCATATTC Shewmr7_2627 3107055 - 3104797 - | binding-protein-dependent transport systems inner membrane component Shewmr7_2628 3107255 - 3107755 + | ACT domain-containing protein TERM 3918 3107801 - 3107779 - T 100 -12.7 -5.45652 | gap 1, opp_overlap 3107779 ACCTTCAACAAAAAA CGCCGC-GGG CACT CCCAGCGGCG TTTTTTATCGCGAGT TERM 3919 3107779 - 3107801 + T 100 -12.7 -5.24531 | gap 1, opp_overlap 3107779 ACCTTCAACAAAAAA CGCCGC-GGG CACT CCCAGCGGCG TTTTTTATCGCGAGT Shewmr7_2629 3108703 - 3107816 - | hypothetical protein TERM 3920 3107960 - 3107944 - G 74 -4.3 -4.78572 | overlap 3107946 CCCCAAGGAACAAAA TACCGCC GAT GGCCGCA AACACGGTTTCTAAA TERM 3921 3107991 - 3108011 + g 71 -7.5 -4.07568 | CTCAAAATAATCGCC GCGTGCGCA GGA TGAGCATGC TTTTGCGCCAGCACC Shewmr7_2630 3109960 - 3108800 - | putative esterase TERM 3922 3110253 - 3110225 - g 78 -3.8 -5.10029 | gap 1 AGGAACGCTAAAAAA GCTGCGCGCACAC TTAG ATGAG-GCGCAAC AAGTACAGTATCAAC Shewmr7_2631 3110205 - 3111029 + | hypothetical protein TERM 3923 3111053 - 3111091 + T 76 -9.6 -3.46509 | opp_overlap 3111056, overlap 3111056 AAAACTCTCGTCAAT TGAGTGTGTTGAGCGCCG CTA TGGCAGTCAGCACACTTA TTGCTCTTATTGCAA TERM 3924 3111056 - 3111088 + T 78 -9.1 -3.85878 | opp_overlap 3111056, overlap 3111053 ACTCTCGTCAATTGA GTGTGTTGAGCGCCG CTA TGGCAGTCAGCACAC TTATTGCTCTTATTG Shewmr7_2632 3111652 - 3111254 - | hypothetical protein TERM 3925 3111811 - 3111781 - R 100 -15.6 -3.22951 | opp_overlap 3111787, overlap 3111782 3111784 3111787 TATATTCCCACAAGA GCATAAGGCGAGTA TCT TACTCGCCTTATGG GGATACCTTATGACA TERM 3926 3111810 - 3111782 - R 100 -19.1 -2.53449 | opp_overlap 3111787, overlap 3111781 3111784 3111787 ATATTCCCACAAGAG CATAAGGCGAGTA TCT TACTCGCCTTATG GGGATACCTTATGAC TERM 3927 3111808 - 3111784 - R 100 -15.9 -2.80252 | opp_overlap 3111787, overlap 3111782 3111781 3111787 ATTCCCACAAGAGCA TAAGGCGAGTA TCT TACTCGCCTTA TGGGGATACCTTATG TERM 3928 3111805 - 3111787 - R 100 -13.2 -3.54771 | opp_overlap 3111787, overlap 3111784 3111782 3111781 CCCACAAGAGCATAA GGCGAGTA TCT TACTCGCC TTATGGGGATACCTT TERM 3929 3111787 - 3111805 + r 100 -13.2 -3.3164 | opp_overlap 3111787 3111784 3111782 3111781 CCCACAAGAGCATAA GGCGAGTA TCT TACTCGCC TTATGGGGATACCTT Shewmr7_2633 3112487 - 3111885 - | hypothetical protein TERM 3930 3112666 - 3112656 - H 75 -8.2 -3.89346 | TTGTTACTTTATAAA GCCC ACA GGGC GTATAGGCGCGGCCC TERM 3931 3113096 - 3113110 + G 79 -7.2 -4.56597 | GAGGGCAAGAGCATC GCTAAA CCC TTTAGC TTTTTGCAAGCCGCA Shewmr7_2634 3112796 - 3113389 + | lysine exporter protein LysE/YggA Shewmr7_2635 3113417 - 3113965 + | hypothetical protein Shewmr7_2636 3114525 - 3114103 - | hypothetical protein TERM 3932 3115802 - 3115785 - g 79 -5.5 -5.00616 | opp_overlap 3115784 3115794 GGTCGTGGTAAAAAA GCCGTCA ACGA TGATGGC ATCTGTGTTGAAGTT Shewmr7_2637 3114882 - 3116447 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 3933 3116519 - 3116477 - T 72 -9.5 -3.19936 | gap 1, opp_overlap 3116483 3116490, overlap 3116490 AATCAGCCAAGGTAA TC-CCAATAAAAAACCAGCA CTTG TGCTGGTTTTTTATTATCGA CAAGGTTTACTTAAA TERM 3934 3116483 - 3116512 + T 100 -15.3 -3.2964 | opp_overlap 3116477 3116490, overlap 3116490 CCAAGGTAATCCCAA TAAAAAACCAGCA CTTG TGCTGGTTTTTTA TTATCGACAAGGTTT TERM 3935 3116505 - 3116490 - T 100 -9 -5.4756 | opp_overlap 3116483 3116490, overlap 3116477 AATCCCAATAAAAAA CCAGCA CTTG TGCTGG TTTTTTATTATCGAC TERM 3936 3116490 - 3116505 + T 100 -9 -5.55769 | opp_overlap 3116490 3116477, overlap 3116483 AATCCCAATAAAAAA CCAGCA CTTG TGCTGG TTTTTTATTATCGAC Shewmr7_2638 3117356 - 3116526 - | hypothetical protein TERM 3937 3116729 - 3116710 - G 76 -7.8 -4.35461 | overlap 3116711 CGAATACGATTAAAA TCCGCTGA GTTT TCAGCGGG TAACTGGATCACTAG TERM 3938 3116728 - 3116711 - G 76 -11.3 -3.20553 | overlap 3116710 GAATACGATTAAAAT CCGCTGA GTTT TCAGCGG GTAACTGGATCACTA Shewmr7_2639 3118936 - 3117587 - | acetyl-CoA hydrolase/transferase Shewmr7_2640 3120233 - 3119112 - | ABC-2 type transporter Shewmr7_2641 3121263 - 3120223 - | ABC transporter related TERM 3939 3120902 - 3120936 + g 70 -4.2 -4.69664 | GCCACAAACTCGAGA TTTTCCCGTACCGACA AAT TGTCGTAGAGGGAGAA TTTTTGCGTCATATA Shewmr7_2642 3122273 - 3121260 - | secretion protein HlyD family protein TERM 3940 3121660 - 3121688 + g 70 -9.5 -3.19157 | TCCTGCGCCACGCCA GCCATGGCCGC CTCGACT GCGGCTCTGGC TTGCTCGAGTTGCTC Shewmr7_2643 3122971 - 3122270 - | TetR family transcriptional regulator TERM 3941 3123041 - 3123067 + r 84 -11 -3.59979 | opp_overlap 3123041 AAGGCAGCAGTTAAA TTCCTCATTTTG ATT CAAATTGAGGAA TTTAACCTAAAAGGC TERM 3942 3123067 - 3123041 - R 84 -11 -3.69094 | opp_overlap 3123041 AAGGCAGCAGTTAAA TTCCTCATTTTG ATT CAAATTGAGGAA TTTAACCTAAAAGGC Shewmr7_2644 3123547 - 3123200 - | hypothetical protein TERM 3943 3124829 - 3124819 - g 76 -4.6 -5.0065 | TACCGATAAACAAAA GACC CGA GGCC AAGAACCGTTAAGCC Shewmr7_2645 3124046 - 3124903 + | hypothetical protein TERM 3944 3125986 - 3126004 + G 82 -11 -3.6608 | TTGAGCTCGATATCG CCGAAGCG GGA CGCTTTGG TTTGAGTGGCGTGCT Shewmr7_2646 3124914 - 3126242 + | hypothetical protein TERM 3945 3126290 - 3126310 + F 100 -15.5 -5.75945 | CTTCGCAACCGCTTT GAGTGCCCA CCT TGGGCACTC TTTTTTTTGAACACT TERM 3946 3126444 - 3126426 - f 77 -10.4 -3.09933 | overlap 3126428 TGCCAAGCTACGCAA TATCGTCA CAA TGACGATA TAAAATTTACATTGA TERM 3947 3126585 - 3126573 - f 71 -4.7 -4.72127 | TAACAATAAAAATAA CAGCG ACT CGCGG CTCCCTATTTACCGC TERM 3948 3127562 - 3127572 + G 76 -6.8 -4.48221 | TAATTTTAAGTGCCT GTCG CAA CGAC TTTTATCCGTTGCTC TERM 3949 3127652 - 3127618 - g 70 -8.4 -3.65902 | opp_overlap 3127618 3127651 CTGATGGCAGGCAAA GCGCGCGGCGCCCATT TCG ACTTAGCGCCGCCCAC TCGCACCGAGCTGTT Shewmr7_2647 3126631 - 3129858 + | lysine decarboxylase transcriptional regulator, CadC Shewmr7_2648 3129879 - 3130256 + | hypothetical protein TERM 3950 3130268 - 3130288 + F 93 -11.1 -4.19506 | opp_overlap 3130269, overlap 3130269 CTAATCTCCATTGAA AGGGACTGC CTA GCAGTCCCC TTTTCCCCTTCCAGT TERM 3951 3130269 - 3130287 + F 100 -14.6 -3.11222 | opp_overlap 3130269, overlap 3130268 TAATCTCCATTGAAA GGGACTGC CTA GCAGTCCC CTTTTCCCCTTCCAG TERM 3952 3130287 - 3130269 - f 100 -14.6 -3.65827 | opp_overlap 3130269 3130268 TAATCTCCATTGAAA GGGACTGC CTA GCAGTCCC CTTTTCCCCTTCCAG TERM 3953 3130430 - 3130412 - f 71 -6.6 -4.11404 | overlap 3130408 TTCATACGACACAAA TCGCGCCG AAT CGACGTGA AGATTGCCCAAAACC TERM 3954 3130558 - 3130548 - f 82 -8.2 -4.38712 | GTCATCCTCAGAAAA GCGC CTA GCGC AGATGATTAAAGTTC Shewmr7_2649 3130590 - 3131609 + | diguanylate cyclase TERM 3955 3132273 - 3132261 - g 79 -5.5 -5.05782 | ATTTATCCTAAAAAA CATGC AAA GCACG AACTCCACTTAATGC Shewmr7_2650 3131670 - 3134360 + | FAD linked oxidase domain-containing protein TERM 3956 3134360 - 3134406 + F 73 -9 -3.48593 | overlap 3134403 TAAGTCGATTGTGTA GCTGAGGATTGATGGCTTG-CT AGCGC AGTCAACCCATCAAT-CTCGGC TTGTGTCGGGCGGTC Shewmr7_2651 3134537 - 3135433 + | hypothetical protein Shewmr7_2652 3135502 - 3136032 + | Lipocalin family protein TERM 3957 3136129 - 3136100 - T 100 -13.7 -3.27786 | opp_overlap 3136106, overlap 3136106 GCTAAAAGCCAGCAA CAAAAACGCCGCT AATA AGCGGCGTTTTTT ATCTGAACACTTAAG TERM 3958 3136106 - 3136123 + T 100 -12.7 -5.36441 | opp_overlap 3136106 3136100 AGCCAGCAACAAAAA CGCCGCT AATA AGCGGCG TTTTTTATCTGAACA TERM 3959 3136123 - 3136106 - T 100 -12.7 -5.14163 | opp_overlap 3136106, overlap 3136100 AGCCAGCAACAAAAA CGCCGCT AATA AGCGGCG TTTTTTATCTGAACA Shewmr7_2653 3137803 - 3136163 - | ABC transporter related TERM 3960 3138190 - 3138158 - R 76 -10.5 -3.04461 | opp_overlap 3138152 3138166 3138189, overlap 3138166 TAGGTAGGCGTAAGA GCGATACAGCCCGCA AAA TGCGGGCTGGATTGG GAGTGCTTACTCACT TERM 3961 3138166 - 3138182 + r 91 -13.7 -2.53382 | opp_overlap 3138166 3138158, overlap 3138152 CGTAAGAGCGATACA GCCCGCA AAA TGCGGGC TGGATTGGGAGTGCT TERM 3962 3138182 - 3138166 - R 100 -13.7 -2.9518 | opp_overlap 3138152 3138166, overlap 3138158 CGTAAGAGCGATACA GCCCGCA AAA TGCGGGC TGGATTGGGAGTGCT Shewmr7_2654 3140532 - 3138256 - | copper-translocating P-type ATPase TERM 3963 3138999 - 3138985 - G 70 -2.8 -4.75372 | ATTACCCACTAAAAA GTCG GCGCCAT CGAC TCGCCCTTCAATGCC TERM 3964 3139894 - 3139929 + g 73 -11.8 -2.56596 | gap 1, overlap 3139884 3139890 CTGTACCGCCTCGCT GGTCTTGCCC-CGAGCT TTC AGCTCGAGGGCGTGCCC TAAGTTAATCAAGCC TERM 3965 3140344 - 3140359 + g 80 -11.8 -3.36878 | opp_overlap 3140342 3140341 GTCCACAATCAACTG GGCGGG ATAA CCCGCC TTATCCATGACTGCC TERM 3966 3140455 - 3140467 + g 71 -6.2 -4.4267 | ACTCACATTCGGCTC GGCC GCGAA GGCC TTTTCAATTTTGGCC Shewmr7_2655 3140681 - 3141070 + | MerR family transcriptional regulator TERM 3967 3141105 - 3141088 - T 100 -8.4 -5.24129 | opp_overlap 3141088 3141103 CGCTGCCATAAAAAA GCCTGC TTAGAT GCAGGC TTGTTAAACGAGTCT TERM 3968 3141088 - 3141105 + T 73 -8.4 -3.62224 | opp_overlap 3141088, overlap 3141103 CGCTGCCATAAAAAA GCCTGC TTAGAT GCAGGC TTGTTAAACGAGTCT TERM 3969 3141103 - 3141119 + T 73 -5.1 -4.60487 | opp_overlap 3141088, overlap 3141088 GCCTGCTTAGATGCA GGCTTGT TAA ACGAGTC TTTTTAAAGCTAGTG Shewmr7_2656 3143162 - 3141129 - | peptidase S9 prolyl oligopeptidase TERM 3970 3143208 - 3143220 + r 72 -6.2 -4.24654 | opp_overlap 3143193 CCGAAATATGCAACT GCCC TTTTC GGGC TATTTTTTCACTTTT Shewmr7_2657 3143462 - 3143220 - | hypothetical protein TERM 3971 3143621 - 3143646 + r 91 -10.5 -4.08485 | opp_overlap 3143626, overlap 3143626 AATCTTTACCAAATA AAAAACCGAGC AAAA GCTCGGTTTTG TTTAATTTCAATAAG TERM 3972 3143641 - 3143626 - R 100 -10.4 -5.68438 | opp_overlap 3143626 3143621 TTACCAAATAAAAAA CCGAGC AAAA GCTCGG TTTTGTTTAATTTCA TERM 3973 3143626 - 3143641 + r 100 -10.4 -5.04868 | opp_overlap 3143626, overlap 3143621 TTACCAAATAAAAAA CCGAGC AAAA GCTCGG TTTTGTTTAATTTCA fabG 3144428 - 3143670 - | 3-ketoacyl-(acyl-carrier-protein) reductase Shewmr7_2659 3145350 - 3144448 - | 3-hydroxyisobutyrate dehydrogenase TERM 3974 3145219 - 3145236 + g 74 -11.3 -3.05816 | opp_overlap 3145218 3145217 GCTCGACACTAAAGC GCCTTGG TCGG CCAAGGC TTGCATGGCGGCTGG TERM 3975 3145404 - 3145450 + r 86 -11.7 -3.24166 | gap 1, opp_overlap 3145412, overlap 3145412 ATAGTTGTTATTCCA GACAA-AAATGGCAGGCAAAGC ATTC GCTTTGCCTGCCATCGATTGGC TTAGCTTAATTGGCT TERM 3976 3145441 - 3145412 - R 100 -20.9 -4.9792 | opp_overlap 3145412 3145404 TATTCCAGACAAAAA TGGCAGGCAAAGC ATTC GCTTTGCCTGCCA TCGATTGGCTTAGCT TERM 3977 3145412 - 3145441 + r 100 -20.9 -2.57192 | opp_overlap 3145412, overlap 3145404 TATTCCAGACAAAAA TGGCAGGCAAAGC ATTC GCTTTGCCTGCCA TCGATTGGCTTAGCT Shewmr7_2660 3146602 - 3145451 - | enoyl-CoA hydratase/isomerase TERM 3978 3146138 - 3146119 - G 75 -9.2 -3.88787 | opp_overlap 3146106 CCACATCGGGATAAA GCCCGATG GTGA CTTCGGGC ATGGCGATGCGGGAG TERM 3979 3146565 - 3146551 - G 76 -5.7 -4.59853 | opp_overlap 3146539 CTAAGGTTTGAAAAA CCACA TTTTG TGTGG TGGACGTGTGTGCAG Shewmr7_2661 3147375 - 3146602 - | enoyl-CoA hydratase Shewmr7_2662 3148597 - 3147440 - | acyl-CoA dehydrogenase domain-containing protein Shewmr7_2663 3150260 - 3148761 - | methylmalonate-semialdehyde dehydrogenase [acylating] TERM 3980 3149298 - 3149309 + g 71 -7.2 -4.11183 | opp_overlap 3149294 TGGGCTAATCAGCGG GCCG TAAC CGGC TTCTTTATCGTCCCA Shewmr7_2664 3151586 - 3150396 - | acetyl-CoA acetyltransferases TERM 3981 3151003 - 3151013 + g 70 -4.6 -4.62336 | GCACCAGAGTTAATG GCCG CAT TGGC TTTTTCCAATGAGCT TERM 3982 3151376 - 3151348 - G 77 -9.5 -3.75937 | overlap 3151359 ACAGACAGAGGTAAA CCTGCACCTAAGG TCG CCTGACGCGCAGG CGCTTGACCCAGACC TERM 3983 3152004 - 3151972 - R 95 -12.7 -3.33671 | opp_overlap 3151960, overlap 3151974 ATAGCCACTTGATAA GACGTGTGGCATTGG TTG CCAACGCCACACGGT TAAAACGAGCATCCC TERM 3984 3152002 - 3151974 - R 100 -19.7 -3.23572 | opp_overlap 3151960, overlap 3151972 AGCCACTTGATAAGA CGTGTGGCATTGG TTG CCAACGCCACACG GTTAAAACGAGCATC Shewmr7_2665 3152981 - 3152040 - | homoserine O-succinyltransferase Shewmr7_2666 3153485 - 3153051 - | hypothetical protein Shewmr7_2667 3153570 - 3154346 + | short-chain dehydrogenase/reductase SDR TERM 3985 3154411 - 3154384 - T 100 -12.2 -4.66264 | gap 1, opp_overlap 3154385 3154391, overlap 3154391 TAAAACTGCGAAAAA CAAAAAAGGAGCC ACA GGCTCC-TTTTTG TTACTTTAAAATCAG TERM 3986 3154385 - 3154411 + T 100 -12.4 -3.53031 | opp_overlap 3154384 3154391, overlap 3154391 AAAACTGCGAAAAAC AAAAAAGGAGCC ACA GGCTCCTTTTTG TTACTTTAAAATCAG TERM 3987 3154391 - 3154405 + T 100 -11.4 -5.24551 | opp_overlap 3154384 3154391, overlap 3154385 GCGAAAAACAAAAAA GGAGCC ACA GGCTCC TTTTTGTTACTTTAA TERM 3988 3154405 - 3154391 - T 100 -11.4 -5.93252 | opp_overlap 3154391 3154385, overlap 3154384 GCGAAAAACAAAAAA GGAGCC ACA GGCTCC TTTTTGTTACTTTAA Shewmr7_2668 3155078 - 3154431 - | outer membrane protein W TERM 3989 3155086 - 3155102 + r 84 -3.7 -5.49568 | overlap 3155088 TTCATCATCATACTC CATATGT ACA ACATAGG TTTTTGTTTTAAATT Shewmr7_2669 3156124 - 3155537 - | hypothetical protein TERM 3990 3156384 - 3156334 - R 100 -34.6 -3.17688 | opp_overlap 3156351, overlap 3156351 TAACCACCTTAGCAA CGCCATCGCTATTATAAGACTCAT AAA ATGAGTCTTATAATAGCGATGGCG ATAAGCTTAACATTA TERM 3991 3156367 - 3156351 - R 76 -9.5 -3.41051 | opp_overlap 3156351, overlap 3156334 CCATCGCTATTATAA GACTCAT AAA ATGAGTC TTATAATAGCGATGG TERM 3992 3156351 - 3156367 + r 76 -9.5 -3.41051 | opp_overlap 3156334 3156351 CCATCGCTATTATAA GACTCAT AAA ATGAGTC TTATAATAGCGATGG Shewmr7_2670 3157082 - 3156432 - | maleylacetoacetate isomerase TERM 3993 3157131 - 3157115 - R 100 -13.7 -5.42259 | opp_overlap 3157112 3157111 TCATCCTGAAAAAAA CGGGGCT AAA AGCCCCG TCAATATTATCTGTC Shewmr7_2671 3158153 - 3157167 - | fumarylacetoacetate (FAA) hydrolase TERM 3994 3158180 - 3158190 + r 80 -4.6 -5.1634 | TGCTTCTACAGCTCG GCGT ACT GCGC TTTTTATCTATTTAT Shewmr7_2672 3160029 - 3158491 - | transcriptional regulator, TyrR TERM 3995 3160287 - 3160259 - R 95 -7.5 -5.54885 | opp_overlap 3160259, overlap 3160276 AACAGGAAGAAAAAA TCAGCGCCTAAAT ATA ATTAAAACGCTGA TTTTAAAATTGAATT phhB 3160643 - 3160305 - | pterin-4-alpha-carbinolamine dehydratase TERM 3996 3160718 - 3160734 + r 70 -5.8 -4.33153 | ATTCGTTTTTTTATG GTCAGC CATTA GCTGGC TTTCTTGGTCTTGGG phhA 3161541 - 3160726 - | phenylalanine 4-monooxygenase TERM 3997 3161289 - 3161279 - G 76 -8.2 -4.17878 | opp_overlap 3161280, overlap 3161280 CCAAAGGAAATCAAA GCCG GCA CGGC CGCGGTTTTCCATCC Shewmr7_2675 3161865 - 3162773 + | UDP-glucose pyrophosphorylase Shewmr7_2676 3162773 - 3163786 + | UDP-galactose 4-epimerase TERM 3998 3163796 - 3163819 + F 90 -7.5 -5.12068 | gap 1, opp_overlap 3163796 GGCTGATCATCTAAA TGGCTTGTGG TAACT CC-CAAGCCA TTTTTCTTAACTATC Shewmr7_2677 3163860 - 3164336 + | ferredoxin-type protein NapF Shewmr7_2678 3164439 - 3164885 + | hypothetical protein Shewmr7_2679 3165127 - 3166179 + | LysR family transcriptional regulator TERM 3999 3166204 - 3166244 + F 95 -12.9 -3.17571 | opp_overlap 3166204 AGTGTTGCCCTCAAA CAGTTGACACTTTCTTT GATGTAA AAATAAAGTGTCAACTG TTAAATTCCAGGATT TERM 4000 3166244 - 3166204 - f 100 -12.9 -3.53091 | opp_overlap 3166204 AGTGTTGCCCTCAAA CAGTTGACACTTTCTTT GATGTAA AAATAAAGTGTCAACTG TTAAATTCCAGGATT TERM 4001 3166647 - 3166668 + G 89 -10.2 -4.40561 | overlap 3166645 CAATAAATCTCTACT GGCACTAG CACTCA CTAGTGCC TTGTTTTTAACCGCC TERM 4002 3166755 - 3166710 - g 77 -11.7 -3.07029 | opp_overlap 3166735, overlap 3166733 3166753 CAAAGACGGGCAAGA TGGTGCACCCGGCACACCAGG AACT CCTGGAACGCCAGGAACACCT GGCACACCTGGTTTA Shewmr7_2680 3166618 - 3168906 + | decaheme cytochrome c TERM 4003 3168964 - 3168982 + T 100 -16 -5.28778 | opp_overlap 3168962 TCTCTGCAACTTATT GGGGCTCC TTC GGAGCCCC TTTTTTATCGGTACT Shewmr7_2681 3169694 - 3168999 - | hypothetical protein Shewmr7_2682 3170433 - 3169699 - | hypothetical protein TERM 4004 3170516 - 3170484 - R 100 -10 -4.77698 | gap 1, opp_overlap 3170490, overlap 3170490 TAACATCAAAAGAAA GCAA-AACGCATCGC CAAG GCGATGCGTTGTCAC GAGGGAAAACCTAAC TERM 4005 3170490 - 3170509 + r 100 -13.6 -3.28712 | opp_overlap 3170490 3170484 CAAAAGAAAGCAAAA CGCATCGC CAAG GCGATGCG TTGTCACGAGGGAAA TERM 4006 3170509 - 3170490 - R 100 -13.6 -4.76478 | opp_overlap 3170490, overlap 3170484 CAAAAGAAAGCAAAA CGCATCGC CAAG GCGATGCG TTGTCACGAGGGAAA Shewmr7_2683 3171461 - 3170541 - | fructokinase Shewmr7_2684 3172330 - 3171524 - | 3'(2'),5'-bisphosphate nucleotidase Shewmr7_2685 3173771 - 3172677 - | dTDP-4-dehydrorhamnose reductase TERM 4007 3172915 - 3172939 + g 79 -11.5 -3.53343 | opp_overlap 3172914 3172915 GTTTTATCTAATAAC TTCAGTGCCAA GGC TTGGCGCTGGA TTTCGAGGGCAAATT Shewmr7_2686 3174567 - 3173809 - | putative hydrolase TERM 4008 3174433 - 3174419 - G 70 -2.7 -4.75063 | overlap 3174420 ACAAAATGCCAAAAA TGCGG TGCAT CCGCC ATCGCCGGACCATGG Shewmr7_2687 3177903 - 3174655 - | SNF2-related protein TERM 4009 3174956 - 3174966 + g 70 -8.2 -3.66028 | opp_overlap 3174955 CTGATTAAAAACACC GGCG TAT CGCC TTCTTGGAACTTATC TERM 4010 3176034 - 3176015 - G 81 -5.7 -5.0133 | TATTCCTTTAAAAAA CAAAGCC AATTTA GGCCTTG CTGCTGATAAGCCCG TERM 4011 3177309 - 3177297 - G 71 -10.5 -3.09273 | opp_overlap 3177299 GCGCCTTAAGATACA GGCGC GAT GCGCC GTGGCGTCTGGTCGA TERM 4012 3178072 - 3178045 - R 76 -9.9 -3.32521 | gap 1, opp_overlap 3178046 3178049, overlap 3178047 3178049 ACGAGAGCCGGATAA CATACCCGCAGG GATCA CCTGCGGGT-CG TTAGCTCATGCAAGC TERM 4013 3178071 - 3178047 - R 84 -11.4 -3.22951 | opp_overlap 3178046 3178049, overlap 3178045 3178049 GAGAGCCGGATAACA TACCCGCAGG GATCA CCTGCGGGTC GTTAGCTCATGCAAG TERM 4014 3178069 - 3178049 - R 100 -14 -3.17622 | opp_overlap 3178046 3178049, overlap 3178047 3178045 GAGCCGGATAACATA CCCGCAGG GATCA CCTGCGGG TCGTTAGCTCATGCA TERM 4015 3178049 - 3178069 + r 95 -14 -2.76263 | opp_overlap 3178049 3178047 3178045, overlap 3178046 GAGCCGGATAACATA CCCGCAGG GATCA CCTGCGGG TCGTTAGCTCATGCA Shewmr7_2688 3179911 - 3178088 - | hypothetical protein Shewmr7_2689 3180435 - 3180644 + | cold-shock DNA-binding protein family protein TERM 4016 3180716 - 3180686 - T 83 -11.3 -3.00617 | opp_overlap 3180692, overlap 3180692 CAACAAATTTACAGA CAAAAATGCCGAC TCAGT GTCGGCATTTTTT ATTGGTGTCTTTTGG TERM 4017 3180692 - 3180710 + T 100 -10.3 -5.5353 | opp_overlap 3180686 3180692 ATTTACAGACAAAAA TGCCGAC TCAGT GTCGGCA TTTTTTATTGGTGTC TERM 4018 3180710 - 3180692 - T 100 -10.3 -5.04597 | opp_overlap 3180692, overlap 3180686 ATTTACAGACAAAAA TGCCGAC TCAGT GTCGGCA TTTTTTATTGGTGTC Shewmr7_2690 3182714 - 3180768 - | potassium efflux system protein TERM 4019 3182307 - 3182321 + g 74 -10 -3.56643 | GCGCCTTAGCCAGCC CTGCTC ATT GAGCAG TTTCAGCACTATGGC Shewmr7_2691 3182884 - 3183774 + | diguanylate cyclase Shewmr7_2692 3185222 - 3183825 - | tRNA(Ile)-lysidine synthetase dnaE 3188778 - 3185302 - | DNA polymerase III subunit alpha TERM 4020 3188063 - 3188079 + g 70 -2.2 -5.00616 | TCTTCACTGCGAAGG TACTGC TGCTC GCTGTA TTTTTTAGGCCGGCG TERM 4021 3188871 - 3188823 - R 77 -3.8 -5.22794 | gap 1, opp_overlap 3188836, overlap 3188831 3188836 ACAATCACTAAAAAA GCAGACTAGCAAAGTCAC-AGCC CTGG GGCTAGTGACTTCGCTCTCAAGC TGAAATGAAAACACC TERM 4022 3188863 - 3188831 - R 93 -13.6 -2.79632 | gap 1, opp_overlap 3188836, overlap 3188823 3188836 TAAAAAAGCAGACTA GCAAAGTCAC-AGCC CTGG GGCTAGTGACTTCGC TCTCAAGCTGAAATG TERM 4023 3188858 - 3188836 - R 75 -8.5 -3.83066 | gap 1, opp_overlap 3188836, overlap 3188831 3188823 AAGCAGACTAGCAAA GTCAC-AGCC CTGG GGCTAGTGAC TTCGCTCTCAAGCTG Shewmr7_2694 3189525 - 3188896 - | RNase HII lpxB 3190682 - 3189525 - | lipid-A-disaccharide synthase TERM 4024 3189882 - 3189872 - G 71 -6.8 -4.26903 | CCGACGCCAGTAAAA TGCC ATC GGCA GCAGCCATCACTTCG TERM 4025 3190195 - 3190171 - G 77 -12.2 -3.14878 | overlap 3190169 CTCTCTAACGGAATA TCGTCGGCCA AGGTA TGGCCGACAA AGGTACAAGGCACCT TERM 4026 3190650 - 3190625 - G 91 -11.1 -4.18762 | overlap 3190627 AACCTGCACCTAAAA TATCGCCGGAG AGTT CTCCGGCGACC ATTGCAAACACTAAT TERM 4027 3190648 - 3190627 - G 100 -15.9 -3.69216 | overlap 3190625 CCTGCACCTAAAATA TCGCCGGAG AGTT CTCCGGCGA CCATTGCAAACACTA Shewmr7_2696 3191569 - 3190799 - | UDP-N-acetylglucosamine acyltransferase Shewmr7_2697 3192030 - 3191566 - | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase TERM 4028 3192062 - 3192049 - R 71 -6.7 -4.08767 | opp_overlap 3192049 CCTAGTTCCTCAAAA TTGCC TTAG GGCAA TTACTCTGGTGTATT Shewmr7_2698 3193088 - 3192063 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 4029 3192950 - 3192912 - G 90 -13.3 -3.80733 | gap 1, opp_overlap 3192912 3192914, overlap 3192914 TTTAGCCGACAATAA CACCGCACTC-GCTTGAG TTGA CTCAAGCTGAGCACGGTA TTTGCTGTTGGCTAA TERM 4030 3192914 - 3192948 + g 70 -9.3 -3.55486 | gap 1, opp_overlap 3192912 3192914, overlap 3192912 TAGCCGACAATAACA CCGCACTC-GCTTGAG TTGA CTCAAGCTGAGCACGG TATTTGCTGTTGGCT TERM 4031 3192948 - 3192914 - G 84 -13.7 -3.48824 | gap 1, opp_overlap 3192914 3192912, overlap 3192912 TAGCCGACAATAACA CCGCACTC-GCTTGAG TTGA CTCAAGCTGAGCACGG TATTTGCTGTTGGCT TERM 4032 3192981 - 3192970 - G 70 -2.2 -5.00616 | CTGTTGGCTAAAAAA GAGA TTTG TCCC GCTGTGGCATGTTCA Shewmr7_2699 3193589 - 3193092 - | outer membrane chaperone Skp (OmpH) Shewmr7_2700 3196135 - 3193655 - | surface antigen (D15) Shewmr7_2701 3197537 - 3196167 - | peptidase RseP TERM 4033 3197562 - 3197596 + r 78 -9.4 -3.68506 | opp_overlap 3197562 TATGTCATCGTCAAA TTCGCTTATTCCTCAT AAA ATGGGGATTAAGCCAA TTTCGCTAACTGTTC Shewmr7_2702 3198778 - 3197588 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Shewmr7_2703 3199640 - 3198783 - | phosphatidate cytidylyltransferase Shewmr7_2704 3200488 - 3199661 - | undecaprenyl pyrophosphate synthetase TERM 4034 3200102 - 3200088 - G 74 -4.2 -4.86033 | AAACGCGCAGAAAAA CGGC TGATATC GCCG ATGATATTCAGTCTG TERM 4035 3200542 - 3200516 - R 100 -13.8 -4.33956 | TTTAAAATAGACAAA CGCCGTGTAG TATACCC CTACACGGCG TAGCAACTCTAGCTT Shewmr7_2705 3201128 - 3200571 - | ribosome recycling factor pyrH 3201887 - 3201159 - | uridylate kinase TERM 4036 3201905 - 3201940 + r 71 -8.2 -3.41222 | opp_overlap 3201909 3201912, overlap 3201903 3201914 TTTTTTGTCCTGGTC ATAACAAGACCGCAGC CATT GCTGCGGTCTTGGGGG TATTTAGCGTTGGCG TERM 4037 3201936 - 3201909 - R 100 -20 -3.28712 | opp_overlap 3201905 3201903 3201914, overlap 3201912 TTGTCCTGGTCATAA CAAGACCGCAGC CATT GCTGCGGTCTTG GGGGTATTTAGCGTT TERM 4038 3201933 - 3201912 - R 100 -15.9 -3.78934 | opp_overlap 3201905 3201903 3201914, overlap 3201909 TCCTGGTCATAACAA GACCGCAGC CATT GCTGCGGTC TTGGGGGTATTTAGC TERM 4039 3201914 - 3201931 + r 93 -12.7 -3.07029 | opp_overlap 3201912 3201909, overlap 3201905 3201903 CTGGTCATAACAAGA CCGCAGC CATT GCTGCGG TCTTGGGGGTATTTA tsf 3202808 - 3201957 - | elongation factor Ts TERM 4040 3202525 - 3202499 - G 76 -11 -3.24411 | overlap 3202497 3202495 3202500 AGTCTTCTAAAGACA CTTTAGACGCTG CAG CAACGTCTAAAA CAGCGTTAGCAAAAC TERM 4041 3202524 - 3202500 - G 73 -12.3 -2.54325 | overlap 3202499 3202497 3202495 GTCTTCTAAAGACAC TTTAGACGCTG CAG CAACGTCTAAA ACAGCGTTAGCAAAA TERM 4042 3202757 - 3202778 + g 80 -10.1 -4.0098 | TACAATCCATCATGC CTGCGCCAG TACG CTCGCGCAG TTCTTTAACTTGGGC TERM 4043 3202872 - 3202853 - R 100 -15 -4.60797 | opp_overlap 3202855 TTTGCAGATATAAAA CAGGGGCC GAAT GGCCCCTG TTAACCAATCAAAAT TERM 4044 3202855 - 3202870 + r 86 -11.8 -3.03124 | opp_overlap 3202853 TGCAGATATAAAACA GGGGCC GAAT GGCCCC TGTTAACCAATCAAA TERM 4045 3202894 - 3202927 + r 75 -9.1 -3.6968 | gap 1, opp_overlap 3202900 3202901, overlap 3202897 3202900 AATCAAAATCTTGGT TAATAAGG-GTGATGA AAC TCATCCCGCCTTATTA TTATTCGGCTTCTAC rpsB 3203656 - 3202928 - | 30S ribosomal protein S2 Shewmr7_2709 3203927 - 3204763 + | methionine aminopeptidase Shewmr7_2710 3204832 - 3207417 + | PII uridylyl-transferase dapD 3207436 - 3208260 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 4046 3208310 - 3208291 - f 79 -8.6 -4.16279 | opp_overlap 3208291 TACACCATGCCAAAA TGCCAAGC TAAT ACTTGGCA TTTTTTATGGTAAAA TERM 4047 3208291 - 3208310 + F 100 -7.9 -5.31275 | opp_overlap 3208291 TACACCATGCCAAAA TGCCAAG CTAATA CTTGGCA TTTTTTATGGTAAAA TERM 4048 3208521 - 3208504 - g 71 -6.9 -4.14472 | opp_overlap 3208506 GCAACATTGGTAAAA TTGGGCG GTGC CGCCCTA CTCTGCACTATAGGA Shewmr7_2712 3208483 - 3208836 + | hypothetical protein TERM 4049 3208875 - 3208859 - T 89 -12.3 -2.75074 | opp_overlap 3208859, overlap 3208856 GTCACGGTAAGATTA GGCGTCA ATT TGACGCC TTTTTATTGCTATCG TERM 4050 3208859 - 3208875 + T 100 -12.3 -5.16841 | opp_overlap 3208856 3208859 GTCACGGTAAGATTA GGCGTCA ATT TGACGCC TTTTTATTGCTATCG Shewmr7_2713 3210917 - 3208989 - | metal dependent phosphohydrolase TERM 4051 3211018 - 3210999 - R 71 -9.4 -3.03243 | opp_overlap 3210999 3211003, overlap 3211003 ACTCAGGGTGCAATA TTAAGGTG ATTA CACCTTAA TATTGCAATTAACCA TERM 4052 3210999 - 3211018 + r 72 -9.4 -3.09492 | opp_overlap 3210999 3211003, overlap 3211003 ACTCAGGGTGCAATA TTAAGGTG ATTA CACCTTAA TATTGCAATTAACCA purU 3212028 - 3211126 - | formyltetrahydrofolate deformylase Shewmr7_2715 3213639 - 3212158 - | PTS system, glucose-like IIB subunint TERM 4053 3212508 - 3212487 - GR 71 -6.5 -4.22375 | ACAGCAGGTAATAAA TCAGCGCCG TCAG CGGCCCTAA GAATACAAACCAGCC TERM 4054 3213142 - 3213125 - GR 72 -6.2 -4.29227 | GGAATGATCAATAAA GAGGCG CTACGT CGCCCC TCAAAAAAGGAGAAA TERM 4055 3213172 - 3213159 - GR 72 -3.8 -4.76171 | CAAAAAAGGAGAAAA TCGC GGGCAG GCGA ATATATTGACTCCAG TERM 4056 3213368 - 3213347 - GR 71 -5.8 -4.28018 | AATACGGCAGTAAAA GCGGCGAT GCCTTG ATCGCGGC AAAACCCTATCGCCA TERM 4057 3213495 - 3213474 - GR 70 -9.5 -2.80077 | overlap 3213470 CGGGCATAAAAGGGA TTGGGCTCA CAGT TAAGCCCAA CATCACACCCGCTGC TERM 4058 3213555 - 3213535 - GR 73 -9 -3.45768 | CGCAATAGGAATTAA CAGCGCCT GACTT AAGCGCTG GGCAAATTTAAACCA Shewmr7_2716 3214055 - 3213591 - | flavodoxin Shewmr7_2717 3215339 - 3214485 - | tRNA pseudouridine synthase C Shewmr7_2718 3215661 - 3215326 - | hypothetical protein TERM 4059 3216274 - 3216248 - g 79 -13 -3.05963 | opp_overlap 3216236 ATTTGCAGTGCAATA TCTCTCGGGACA AAT TGCCCCGAGTGA ATGGCAGCATATTGG Shewmr7_2719 3215793 - 3216806 + | hypothetical protein Shewmr7_2720 3216803 - 3217189 + | hypothetical protein TERM 4060 3217347 - 3217317 - T 100 -14.1 -5.79595 | gap 1, opp_overlap 3217321, overlap 3217321 TTTGAAAATAAAAAA GAAAGGGCGTGGCC ATAA GACCACGCCCTT-C TGTTCTCTGTTAAGC TERM 4061 3217321 - 3217344 + T 100 -13.8 -3.83668 | opp_overlap 3217321 3217317 AAAATAAAAAAGAAA GGGCGTGGCC ATAA GACCACGCCC TTCTGTTCTCTGTTA TERM 4062 3217344 - 3217321 - T 100 -16 -5.29208 | opp_overlap 3217321, overlap 3217317 AAAATAAAAAAGAAA GGGCGTGGCC ATAA GACCACGCCC TTCTGTTCTCTGTTA TERM 4063 3218144 - 3218116 - T 100 -9.5 -5.16133 | opp_overlap 3218119 3218120, overlap 3218120 AGGAGAATAGAAAAA GAAAGGGGCGCAC TAT GTGCACCCCATTT ATCCTCTGCAAGCCA TERM 4064 3218119 - 3218141 + T 80 -9 -4.0162 | opp_overlap 3218116 3218120, overlap 3218120 AGAATAGAAAAAGAA AGGGGCGCAC TAT GTGCACCCCA TTTATCCTCTGCAAG TERM 4065 3218140 - 3218120 - T 100 -14.7 -5.05037 | opp_overlap 3218120 3218119, overlap 3218116 GAATAGAAAAAGAAA GGGGCGCAC TAT GTGCACCCC ATTTATCCTCTGCAA TERM 4066 3218120 - 3218140 + T 93 -12.5 -3.00651 | opp_overlap 3218116 3218120, overlap 3218119 GAATAGAAAAAGAAA GGGGCGCAC TAT GTGCACCCC ATTTATCCTCTGCAA Shewmr7_2721 3219158 - 3218853 - | hypothetical protein Shewmr7_2722 3219789 - 3219151 - | GCN5-related N-acetyltransferase TERM 4067 3219521 - 3219503 - G 82 -12.4 -3.63515 | opp_overlap 3219502 3219503, overlap 3219504 CGCCAGTGCCAATAA CGCCCCTC CCC GAGGGGCA CTTCCTGAGTAACCA TERM 4068 3219520 - 3219504 - G 79 -13.7 -2.77895 | opp_overlap 3219503 3219502, overlap 3219503 GCCAGTGCCAATAAC GCCCCTC CCC GAGGGGC ACTTCCTGAGTAACC Shewmr7_2723 3219934 - 3220167 + | hypothetical protein TERM 4069 3220178 - 3220161 - T 93 -9.9 -4.3255 | TGTGCAATTAAGAAA GCCCTAA TGGC TTAGGGC TGACACTGAATCACT Shewmr7_2724 3220614 - 3220216 - | hypothetical protein TERM 4070 3220658 - 3220646 - H 80 -6.3 -4.83615 | TACTTGTTATAAAAA TGCTT AAA AAGCA AAATCAATGCCAAAC Shewmr7_2725 3220762 - 3221145 + | hypothetical protein Shewmr7_2726 3221145 - 3221918 + | hypothetical protein Shewmr7_2727 3222671 - 3222021 - | SecY interacting protein Syd TERM 4071 3222284 - 3222273 - G 71 -5.8 -4.41302 | opp_overlap 3222273 GAGCAAACCAATAAA CCAG GTTG CTGG TTGCTTGAGCTTTTG queF 3222731 - 3223591 + | 7-cyano-7-deazaguanine reductase TERM 4072 3223609 - 3223626 + T 100 -11.3 -5.62045 | opp_overlap 3223609 AACTTGCAGCAAAAA GCCCTGA ATAA TCAGGGC TTTTTTATTATCTGT TERM 4073 3223626 - 3223609 - T 100 -11.3 -4.73388 | opp_overlap 3223609 AACTTGCAGCAAAAA GCCCTGA ATAA TCAGGGC TTTTTTATTATCTGT Shewmr7_2729 3224426 - 3223686 - | SpoOM family protein Shewmr7_2730 3225008 - 3224487 - | putative lipoprotein Shewmr7_2731 3226276 - 3225278 - | 4'-phosphopantetheinyl transferase TERM 4074 3225760 - 3225746 - G 100 -7 -5.32699 | CCAAAGATCAAAAAA GCGCTG CCG CTGCGC ATCCTCGCCCTCAAG TERM 4075 3226130 - 3226114 - G 73 -5.7 -4.52857 | overlap 3226115 3226118 ATCCTCGAGATAAAA CGCAGCG CAG CGCCGCT CGCACCAATAAGCCG Shewmr7_2732 3226657 - 3227526 + | transcriptional regulator, putative TERM 4076 3229086 - 3229048 - g 71 -5.3 -4.52589 | gap 2, overlap 3229072 3229074 CCGCCGCAGACAAAA CTGCGCTGCTGGGCGAGTT AAA AAC-CGCGCTGCAGCA-AG CAACTGCCGCTAAAG TERM 4077 3229082 - 3229072 - g 70 -4.6 -4.65895 | overlap 3229048 3229074 TGGGCGAGTTAAAAA CCGC GCT GCAG CAAGCAACTGCCGCT TERM 4078 3231264 - 3231253 - g 76 -7.2 -4.36914 | TGGTTGCCGATAAAA CGGG TTAT CCCG TTGAAATGTTAGAAC TERM 4079 3231823 - 3231843 + G 71 -7.5 -3.99324 | overlap 3231827 CAGTACTCGCAAGTG CCGTCGC TGCAAGT GCGGCGG TTTCTCATGATGAAA TERM 4080 3233760 - 3233735 - g 70 -4.7 -4.62069 | gap 1, overlap 3233737 GGCTCAGGGTAAAAA TCGCAACGAGCT GAA AGC-CGCTGCCA TTACACATCTACAAA Shewmr7_2733 3227523 - 3235445 + | beta-ketoacyl synthase TERM 4081 3235674 - 3235704 + G 78 -12.6 -3.01712 | opp_overlap 3235673 CTGATGAGCCAACAC TGGTCGCCTTGCTC ACA GAGCAACTCGACCA TATTGCGCAAAAACA TERM 4082 3235891 - 3235908 + G 86 -8.4 -4.66537 | TACAAATATCGTCGA GCGCTG CTTAAA CAGCGC TTTTATCTTGGCGAA TERM 4083 3237475 - 3237495 + G 79 -6.8 -4.68209 | opp_overlap 3237472 CGCGCTGATTAACAC CGCGTATC AACAA GGTGCGCG TTTATTTGTTGAGGT TERM 4084 3237576 - 3237549 - g 87 -9.8 -4.431 | CACTTATCGATAAAA TCGGCCGCCAAC TAGA GTTGGGCGCCGA TGGCGTTCAAACACA Shewmr7_2734 3235550 - 3237820 + | omega-3 polyunsaturated fatty acid synthase PfaB TERM 4085 3237865 - 3237855 - g 74 -6.8 -4.2828 | overlap 3237857 3237862 CCCGACTCAGCAAAA CAGC ACA GCTG TGCCAAACGACCAGC TERM 4086 3238997 - 3238972 - g 71 -6.7 -4.1891 | opp_overlap 3238973, overlap 3238973 TTTTTCGAAGATAAA CTCGGCGGCAC TAAG GCGCCGCTGAT AGGTTCGGCTAAATC TERM 4087 3238996 - 3238973 - g 71 -10.2 -3.11024 | opp_overlap 3238973, overlap 3238972 TTTTCGAAGATAAAC TCGGCGGCAC TAAG GCGCCGCTGA TAGGTTCGGCTAAAT TERM 4088 3242418 - 3242404 - g 74 -7.8 -4.13206 | opp_overlap 3242404 ATGATTAAAGAAGAA GCGGAT TGC ACCCGC TATTCGCAGAGCAGT TERM 4089 3242518 - 3242503 - g 80 -10.4 -3.69338 | AATCAAGCGGAACAA GCGCCA CTGA TGGCGC AAATCCCAGATGTTT TERM 4090 3243135 - 3243148 + G 71 -5.9 -4.33808 | TGGCGAGCCCTTCTA CCGCG GTAA TGCGG TTTTCGGTTACTTTA Shewmr7_2735 3237829 - 3243759 + | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ TERM 4091 3245346 - 3245363 + G 70 -8.3 -3.76224 | TACCAGATTTGGGCA GGCCCCG CCCT CGGCGCC TTTAATGCCTGGGCA Shewmr7_2736 3243888 - 3245540 + | 2-nitropropane dioxygenase, NPD TERM 4092 3245564 - 3245589 + F 100 -16.3 -5.47218 | opp_overlap 3245556 GGGAAACCTTATCGA GCGGGTTAAGT GAAA ACTTAACCCGC TTTTTTTGACTGCAA Shewmr7_2737 3246095 - 3246409 + | hypothetical protein Shewmr7_2738 3246581 - 3247009 + | XRE family transcriptional regulator TERM 4093 3247150 - 3247128 - f 72 -9.2 -3.1875 | opp_overlap 3247128 GATACCTTAATCTAA GCCGATAC TCAAAAG GTATCGGC TTTTTTATGCTGTTC TERM 4094 3247128 - 3247150 + F 100 -9.9 -5.36965 | opp_overlap 3247128 GATACCTTAATCTAA GCCGATACT CAAAA GGTATCGGC TTTTTTATGCTGTTC Shewmr7_2739 3247491 - 3247667 + | hypothetical protein Shewmr7_2740 3247690 - 3247884 + | hypothetical protein TERM 4095 3247959 - 3247998 + F 100 -13.8 -3.65351 | opp_overlap 3247960 3247995, overlap 3247960 ATTGAGTACCACCGA ACCACTTTATCGTGAC AGCTATTG GTCACGATAAAGTGGG TTTCCCTGAGGCTCG TERM 4096 3247997 - 3247960 - f 100 -17.3 -3.10715 | opp_overlap 3247959 3247960, overlap 3247995 TTGAGTACCACCGAA CCACTTTATCGTGAC AGCTATTG GTCACGATAAAGTGG GTTTCCCTGAGGCTC TERM 4097 3247960 - 3247997 + F 100 -17.3 -2.78996 | opp_overlap 3247960 3247995, overlap 3247959 TTGAGTACCACCGAA CCACTTTATCGTGAC AGCTATTG GTCACGATAAAGTGG GTTTCCCTGAGGCTC Shewmr7_2741 3248039 - 3249736 + | hypothetical protein Shewmr7_2742 3251232 - 3249823 - | sigma-54 dependent trancsriptional regulator Shewmr7_2743 3251486 - 3251962 + | hypothetical protein TERM 4098 3251984 - 3252002 + F 100 -8.8 -5.10461 | opp_overlap 3251981 3251984, overlap 3251978 AATGCAATCCAATGA CGCGGC CAACAGA GCCGCG TTTTTGTTGCCTGCG TERM 4099 3252002 - 3251984 - f 70 -9.5 -2.79456 | opp_overlap 3251984 3251978, overlap 3251981 AATGCAATCCAATGA CGCGGCC AACAG AGCCGCG TTTTTGTTGCCTGCG Shewmr7_2744 3252235 - 3252783 + | transport-associated TERM 4100 3252886 - 3252859 - T 86 -11.4 -3.3422 | opp_overlap 3252861 3252866, overlap 3252861 3252866 CACTCGGGCAAAAAC CACAAAACCAGC TTCG GCTGGTTTTGTT TTATCGGCGCGATGT TERM 4101 3252884 - 3252861 - T 100 -14 -3.23708 | opp_overlap 3252861 3252866, overlap 3252859 3252866 CTCGGGCAAAAACCA CAAAACCAGC TTCG GCTGGTTTTG TTTTATCGGCGCGAT TERM 4102 3252861 - 3252884 + T 100 -14 -4.37092 | opp_overlap 3252861 3252859 3252866, overlap 3252866 CTCGGGCAAAAACCA CAAAACCAGC TTCG GCTGGTTTTG TTTTATCGGCGCGAT TERM 4103 3252866 - 3252879 + T 95 -8.1 -5.18371 | opp_overlap 3252866 3252861 3252859, overlap 3252861 GCAAAAACCACAAAA CCAGC TTCG GCTGG TTTTGTTTTATCGGC TERM 4104 3252879 - 3252866 - T 86 -8.1 -4.72556 | opp_overlap 3252861 3252866, overlap 3252861 3252859 GCAAAAACCACAAAA CCAGC TTCG GCTGG TTTTGTTTTATCGGC Shewmr7_2745 3253334 - 3252918 - | hypothetical protein TERM 4105 3253427 - 3253406 - R 100 -13.1 -4.44046 | opp_overlap 3253403 GCTAGGTGAAATAAA TACCTCAGC CGCA GCTGAGGTA AAATTAACTTAGCAT Shewmr7_2746 3254307 - 3253459 - | hypothetical protein TERM 4106 3254212 - 3254202 - G 71 -6.8 -4.208 | TGTTAAAACGATAAA TGCC CGC GGCA AGAATACTGAGCACA Shewmr7_2747 3255026 - 3254436 - | phosphoglycerate mutase Shewmr7_2748 3255596 - 3255096 - | hypothetical protein TERM 4107 3255740 - 3255769 + r 100 -11.4 -4.42464 | opp_overlap 3255740 3255737 TAAGTTGGAAAGTTA GCCGAGTGCGAT TCACTC AACGCGCTCGGC TTTATTTAACGGGTT Shewmr7_2749 3256901 - 3255783 - | porin TERM 4108 3256905 - 3256880 - G 76 -6.1 -4.61527 | opp_overlap 3256880 AAAACGCTTTAAAAA GGTCATGACGA TTAA CCCCCATGACC TGCTTAGGTTAATCA Shewmr7_2750 3258261 - 3256918 - | major facilitator transporter TERM 4109 3258211 - 3258249 + g 86 -3.3 -5.67063 | overlap 3258204 3258226 3258227 AATTTTTTCGGGCGT TTCGTCCATAATTGGT-CG GTC CGCACCGGTT-TGGAAGAA TTTTTTTATCATAGC TERM 4110 3258410 - 3258387 - H 73 -5.3 -4.6526 | ACAAATTGGCAAAAA CGAGTTAGT TTTGAC ACAAACTCG TCCCTAGAAAGCAAA TERM 4111 3258510 - 3258491 - H 95 -7.2 -5.58209 | overlap 3258493 TCAAACCCAAAAAAA TCGAGTCA AATT TGACTCAA CCACCGCAAAACAAA TERM 4112 3258540 - 3258528 - H 84 -3.5 -5.46706 | ACCGCAAAACAAAAA TTAAA AAT TTTAA AAAATATGCGTGTTG Shewmr7_2751 3258581 - 3259894 + | putative phosphoglycerate transport regulatory protein PgtC TERM 4113 3259942 - 3259968 + G 74 -4.5 -4.81752 | gap 1, opp_overlap 3259942 3259946, overlap 3259942 3259943 TCTTTAGGCGGAAAA T-TAATGCTCGC CTTT GCGAGCATGACA TTTTTAAATCTTTTT TERM 4114 3259963 - 3259946 - g 82 -11.3 -3.67622 | opp_overlap 3259943 3259942 3259942, overlap 3259942 TAGGCGGAAAATTAA TGCTCGC CTTT GCGAGCA TGACATTTTTAAATC TERM 4115 3260996 - 3261008 + G 73 -9.1 -3.76393 | opp_overlap 3260995 3260994 3260996 TTGACCTGAAAAATG TGGCC GAC GGCCA TTTAGATTGGCCTAT Shewmr7_2752 3259897 - 3262269 + | periplasmic sensor signal transduction histidine kinase TERM 4116 3262506 - 3262530 + G 70 -10.1 -3.1978 | overlap 3262504 ATCCCGAAATCCCAG TCATCATGATC ACT GGTCATGGTGA TATTCCTCTGGCCGT Shewmr7_2753 3262259 - 3263536 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 4117 3263547 - 3263579 + F 100 -15 -3.76815 | opp_overlap 3263542 CATAAATCGACTCCC TCGGCTTACCCATC GCTCA GATGAGTAAGCCGA TTTGCGCTTTTCCAT Shewmr7_2754 3263703 - 3263945 + | hypothetical protein Shewmr7_2755 3264544 - 3263954 - | hypothetical protein TERM 4118 3264014 - 3263985 - G 71 -6.5 -4.17048 | gap 1, overlap 3264009 TGTCCTCGAAAATAA TGGCGGTAATACCC CAC GAG-ATTACTGCCA ATAAACAGCAGCTCC Shewmr7_2756 3265202 - 3264594 - | cyclic nucleotide-binding protein Shewmr7_2757 3265833 - 3265207 - | fumarylacetoacetate (FAA) hydrolase Shewmr7_2758 3266895 - 3265882 - | succinylglutamate desuccinylase/aspartoacylase TERM 4119 3266316 - 3266303 - G 72 -8.1 -3.87627 | opp_overlap 3266302, overlap 3266301 GCCTCATACAAAATA CAGGG AATG CCCTG CTGGTTCGCATAGCC Shewmr7_2759 3267500 - 3266964 - | MarR family transcriptional regulator TERM 4120 3267152 - 3267164 + g 76 -6.2 -4.64861 | CCTTACTGTGCTCAC GGGC AATCA GCCC TTTATTTTCAAGCCG TERM 4121 3267641 - 3267618 - R 100 -14 -6.00086 | ACAGCATAAAAAAAA CGCCCAATTT ATAA AAATTGGGCG GTTCAGGTATCAAGC Shewmr7_2760 3268242 - 3267679 - | PhnA protein TERM 4122 3268335 - 3268321 - H 75 -7.2 -4.27443 | GCAGGAGCAAAATAA CCATAA ACT TTATGG GACTAAACTTAATTG TERM 4123 3268561 - 3268543 - H 82 -10.2 -3.68024 | GCTGGCAATATAGAA TGCTCGCC CAC GGCGCGCA TAAAAATTAAGGGAT TERM 4124 3269064 - 3269052 - g 70 -3.3 -4.8543 | CAACGGCTATAAAAA GGCGC TGC ACACC TTAACCAATCAAGGA Shewmr7_2761 3268585 - 3269298 + | hypothetical protein TERM 4125 3269337 - 3269362 + T 72 -9.8 -2.87996 | overlap 3269340 AGCTTGTACAGTTGA TGAGGCCAAG CATTGA CTTGGCCTTA TGCTTATCGGTTTAG TERM 4126 3269340 - 3269359 + T 78 -9.3 -3.57441 | overlap 3269337 TTGTACAGTTGATGA GGCCAAG CATTGA CTTGGCC TTATGCTTATCGGTT Shewmr7_2762 3269997 - 3269386 - | TetR family transcriptional regulator Shewmr7_2763 3270152 - 3270778 + | glutathione S-transferase domain-containing protein Shewmr7_2764 3270840 - 3271508 + | glutathione S-transferase domain-containing protein TERM 4127 3271547 - 3271567 + F 100 -8.3 -5.1861 | opp_overlap 3271547 CGTTTTCCCCATCAA GCCCCAA CTCAGCA TTGGGGC TTTTTTACTGCTAGC TERM 4128 3272866 - 3272919 + G 71 -5.4 -4.56775 | gap 1, opp_overlap 3272908, overlap 3272873 CAGGGCGGAAGCTTA GTC-TATGCCACTTGCTCATTGTCA CCCGT TGAGAATGAGCAAGTGGTTTCCGCC TTTTTACAACAACAT TERM 4129 3272873 - 3272911 + G 100 -17.7 -3.68853 | opp_overlap 3272908, overlap 3272866 GAAGCTTAGTCTATG CCACTTGCTCATTGTCA CCCGT TGAGAATGAGCAAGTGG TTTCCGCCTTTTTAC Shewmr7_2765 3271687 - 3273060 + | Fmu (Sun) domain-containing protein TERM 4130 3273089 - 3273111 + F 100 -12.1 -4.44608 | opp_overlap 3273088 3273087 TTTTTTATCATAACT TGGCACTCA TATCC TGAGTGCCA TTCTTTTTGCCTCCG Shewmr7_2766 3273349 - 3273507 + | hypothetical protein TERM 4131 3273564 - 3273594 + F 93 -12.7 -3.1506 | opp_overlap 3273563 3273562 3273571, overlap 3273567 3273571 TAAGCCTGTCAAATC CGAGCAAGTTGGA TAACC TCCAACTTGCTAG TTAGTCCAAGCGTTT TERM 4132 3273567 - 3273591 + F 91 -13 -2.77899 | opp_overlap 3273563 3273562 3273571, overlap 3273564 3273571 GCCTGTCAAATCCGA GCAAGTTGGA TAACC TCCAACTTGC TAGTTAGTCCAAGCG TERM 4133 3273821 - 3273835 + G 84 -4.2 -5.24129 | opp_overlap 3273821 TTAGTGTTGAATAAA GCCG ATATGTA CGGC TTTTTTCTCAAGGGA Shewmr7_2767 3273746 - 3276871 + | hypothetical protein TERM 4134 3276868 - 3276851 - T 72 -7.7 -3.78775 | CCGGCCATTATCAAA GGCGAAA AAGA CTTCGCC TAAATACCAAGGGGC TERM 4135 3276905 - 3276873 - T 73 -9.1 -3.54307 | opp_overlap 3276879, overlap 3276879 AAGACTTCGCCTAAA TACCAAGGGGCTGCA TTA TGCAGCCCCTTTTTT ATCCAACTATTTGTA TERM 4136 3276879 - 3276899 + T 100 -16.9 -5.252 | opp_overlap 3276873 3276879 TCGCCTAAATACCAA GGGGCTGCA TTA TGCAGCCCC TTTTTTATCCAACTA TERM 4137 3276899 - 3276879 - T 100 -16.9 -3.45571 | opp_overlap 3276879, overlap 3276873 TCGCCTAAATACCAA GGGGCTGCA TTA TGCAGCCCC TTTTTTATCCAACTA Shewmr7_2768 3278644 - 3276977 - | diguanylate cyclase TERM 4138 3278219 - 3278204 - G 77 -9 -4.02302 | TGCAGAGGAAAAATA TCGGCT GCTC AGCCGA GTCACTAACCAATAA TERM 4139 3278448 - 3278436 - G 73 -9.1 -3.70109 | GACACCATCCAATAA TCGCC CCC GGCGA GACTTACCGAACTGG Shewmr7_2769 3278842 - 3279693 + | hypothetical protein TERM 4140 3279704 - 3279680 - T 100 -11.4 -4.37198 | opp_overlap 3279680 3279698 AAGCCAAATGGAAAA GCCGGCGAAG TTAAC CTTGGCCGGC TTTGACAGCGAAGTG TERM 4141 3279680 - 3279704 + T 89 -11.4 -3.53224 | opp_overlap 3279680, overlap 3279698 AAGCCAAATGGAAAA GCCGGCGAAG TTAAC CTTGGCCGGC TTTGACAGCGAAGTG TERM 4142 3279736 - 3279717 - T 72 -9.3 -3.12351 | opp_overlap 3279698 GGCTTTGACAGCGAA GTGGCCT CTGTAT AGGCCAC TCAATAAGGCGAGAT Shewmr7_2770 3280290 - 3279751 - | YfaZ family protein TERM 4143 3280368 - 3280352 - R 89 -3.7 -5.64328 | AATAAAAAAAGAAAA TCTGC ATATTTA GCAGA GAGTCGCAAAGATTT Shewmr7_2771 3280963 - 3280454 - | GCN5-related N-acetyltransferase TERM 4144 3280904 - 3280925 + g 77 -9.4 -4.07568 | opp_overlap 3280899, overlap 3280899 3280905 ATCAATTAATGCCGC TGCAGCCG CTAATT CGGCTGCG TTTTGGCAAAGGACA TERM 4145 3280905 - 3280924 + g 71 -10.7 -3.04398 | opp_overlap 3280899, overlap 3280899 3280904 TCAATTAATGCCGCT GCAGCCG CTAATT CGGCTGC GTTTTGGCAAAGGAC Shewmr7_2772 3282362 - 3280992 - | MgtE intracellular region Shewmr7_2773 3282510 - 3282995 + | glutathione peroxidase TERM 4146 3283177 - 3283194 + T 100 -11.3 -5.77988 | opp_overlap 3283169 AGGAATAGGTCACTA GGCAACC AATT GGTTGCC TTTTTTTATGTCTAT TERM 4147 3283560 - 3283578 + T 100 -13.2 -5.77988 | ACTTTGATTCTTTTA TGGCAACC TTA GGTTGCCA TTTTTTTATCTGTAT Shewmr7_2774 3285412 - 3283595 - | peptidase M1, membrane alanine aminopeptidase TERM 4148 3285768 - 3285785 + r 100 -7.7 -5.60993 | opp_overlap 3285766 GAATTGGAATTTACA GCAACCT TATT GGGTTGC TTTTTTTATGCCCAC TERM 4149 3285860 - 3285843 - R 100 -9.1 -5.61881 | opp_overlap 3285843 TCCCAAAAACAAAAA GGGCCTC CGAA GAGACCC TTAATGGTTTAGCGA Shewmr7_2775 3286854 - 3285883 - | phosphate binding protein TERM 4150 3287049 - 3287023 - R 100 -11.7 -4.88736 | opp_overlap 3287028, overlap 3287028 CAGTACTGATAAAAA CAAAACAGGCC CTAAT GGCCTGTTTTA AATATAAAAATAAAT TERM 4151 3287028 - 3287044 + r 85 -9.4 -4.2349 | opp_overlap 3287023 3287028 CTGATAAAAACAAAA CAGGCC CTAAT GGCCTG TTTTAAATATAAAAA TERM 4152 3287044 - 3287028 - R 100 -9.4 -5.35224 | opp_overlap 3287028, overlap 3287023 CTGATAAAAACAAAA CAGGCC CTAAT GGCCTG TTTTAAATATAAAAA Shewmr7_2776 3288379 - 3287081 - | PAS/PAC sensor signal transduction histidine kinase TERM 4153 3288442 - 3288413 - R 83 -11.5 -2.90309 | opp_overlap 3288413 3288412 3288408 3288405, overlap 3288408 GGCTAAATAAGAGGA GCACAAGATAGCT TAAA AGCTAACCTGTGC CTATCTCTTATTTGG Shewmr7_2777 3289149 - 3288460 - | two component transcriptional regulator TERM 4154 3289311 - 3289296 - R 100 -10.4 -5.46657 | opp_overlap 3289296 TATCGCAATAAAAAA GGAGGC CTAA GCCTCC TTAATTCAACCTTAA TERM 4155 3289296 - 3289311 + r 78 -10.4 -3.35867 | opp_overlap 3289296 TATCGCAATAAAAAA GGAGGC CTAA GCCTCC TTAATTCAACCTTAA Shewmr7_2778 3290279 - 3289335 - | porin TERM 4156 3290435 - 3290420 - H 74 -4.6 -4.78848 | opp_overlap 3290420 3290433, overlap 3290434 CCTTCAAAGATAAAA CCTAGG CACA CCAAGG CTTTCAGCCAGATTT TERM 4157 3291351 - 3291322 - g 71 -6.5 -4.14243 | opp_overlap 3291331, overlap 3291331 GACGCCAGCGTAAAA CGCTTAAAATTCT CCGA AGAATTTAGAGCG GGTAATGATGAGCTA rdgC 3290572 - 3291486 + | recombination associated protein TERM 4158 3291619 - 3291570 - T 100 -13.7 -4.17906 | gap 1, opp_overlap 3291578, overlap 3291578 AATCAAACGAAATAA TGTATAAAGGCGCCGCAGTTGAAC TTA GCTC-ACTGCGGCGCCTTTTTAGT ATCTATGACTGAAGT TERM 4159 3291578 - 3291611 + T 100 -17.5 -4.86133 | gap 1, opp_overlap 3291578 3291570 GAAATAATGTATAAA GGCGCCGCAGTTGAAC TTA GCTCA-CTGCGGCGCC TTTTTAGTATCTATG TERM 4160 3291611 - 3291578 - T 100 -19.7 -4.0386 | gap 1, opp_overlap 3291578, overlap 3291570 GAAATAATGTATAAA GGCGCCGCAGTTGAAC TTA GCTC-ACTGCGGCGCC TTTTTAGTATCTATG Shewmr7_2780 3293524 - 3291713 - | peptidase M61 domain-containing protein TERM 4161 3291771 - 3291784 + g 70 -3.1 -4.83593 | TCAATGCCAAGCCAG GCTTT GAAG AAGGC TTTTTGCTGCTTATT TERM 4162 3293407 - 3293423 + g 72 -9.5 -3.34062 | overlap 3293404 CGGGGAAGGTCACAC TCACCTT CGC AAGGTGA TGTTCTGGTTGGCTT Shewmr7_2781 3293665 - 3295827 + | TPR repeat-containing protein TERM 4163 3296518 - 3296500 - g 71 -7.4 -4.07885 | GATGTCTTGCCAAAA CACAGGCA ACT TGCCCATG AACTCGCGCAGATGA Shewmr7_2782 3295978 - 3297534 + | diguanylate cyclase TERM 4164 3297676 - 3297664 - g 100 -6.9 -5.40474 | ATCGCCTCAAAAAAA GCGCC AAG AGCGC CCTATATCAACTGTA Shewmr7_2783 3297591 - 3298946 + | hypothetical protein xni 3298961 - 3299743 + | exonuclease IX TERM 4165 3300041 - 3300053 + G 71 -5.5 -4.56597 | opp_overlap 3300050 CCGTTAAGACTTTAT TTGGC AAA GCCGA TTTTTCAGAGGCGAA Shewmr7_2785 3299854 - 3300282 + | hypothetical protein TERM 4166 3300330 - 3300350 + T 78 -4 -5.18357 | gap 1, opp_overlap 3300330 ATTCGATATAAAAAA CCACC-TCT GCAG GGAAGGTGG TTTTTTAGTGACTTA TERM 4167 3300350 - 3300330 - T 82 -4.7 -5.37043 | opp_overlap 3300330 ATTCGATATAAAAAA CCACCTC TGCAGGG AAGGTGG TTTTTTAGTGACTTA Shewmr7_2786 3300725 - 3300384 - | hypothetical protein Shewmr7_2787 3302455 - 3300794 - | twin-arginine translocation pathway signal Shewmr7_2788 3303873 - 3302632 - | outer membrane porin TERM 4168 3303892 - 3303911 + H 72 -7.2 -4.07568 | TTCCTATTATTAGTA GCCTAAAG CGAT TTTTAGGC TTTTAAAAAGCCGCA Shewmr7_2789 3304262 - 3304987 + | GntR family transcriptional regulator TERM 4169 3305039 - 3305022 - T 84 -9.9 -3.85698 | opp_overlap 3305022 CGCGCTTTCTACAAA TCCCGAA TTAG TTCGGGA TTTTTGCTTTACGAG TERM 4170 3305022 - 3305039 + T 100 -9.9 -4.98531 | opp_overlap 3305022 CGCGCTTTCTACAAA TCCCGAA TTAG TTCGGGA TTTTTGCTTTACGAG TERM 4171 3305275 - 3305292 + T 82 -6.9 -4.7497 | opp_overlap 3305275 3305276, overlap 3305276 CCCTCGGCATAAAAA CGCCACC TTTC GGTGGCA TTTTTAATGGATAAA TERM 4172 3305292 - 3305275 - T 100 -9.1 -4.82901 | opp_overlap 3305275 3305276, overlap 3305276 CCCTCGGCATAAAAA CGCCACC TTTC GGTGGCA TTTTTAATGGATAAA TERM 4173 3305276 - 3305291 + T 80 -10.4 -3.445 | opp_overlap 3305275 3305276, overlap 3305275 CCTCGGCATAAAAAC GCCACC TTTC GGTGGC ATTTTTAATGGATAA TERM 4174 3305291 - 3305276 - T 80 -10.4 -3.49419 | opp_overlap 3305276 3305275, overlap 3305275 CCTCGGCATAAAAAC GCCACC TTTC GGTGGC ATTTTTAATGGATAA Shewmr7_2790 3308138 - 3305322 - | peptidase S9 prolyl oligopeptidase TERM 4175 3306447 - 3306423 - G 81 -12.9 -3.20435 | opp_overlap 3306419 3306422 3306425 GTAACCATGCAGCAA CACAGTGGCAT TGT AGGCCACTGTG GTTGGCTCATCGGGG Shewmr7_2791 3308393 - 3309403 + | isocitrate dehydrogenase TERM 4176 3309448 - 3309419 - T 100 -12.3 -3.53012 | opp_overlap 3309426, overlap 3309426 TCGCTCTGCGCGAAA CAAAAAACGCACC TAGG GGTGCGTTTTTTT ATGGCCGCTATATAG TERM 4177 3309441 - 3309426 - T 100 -10.4 -5.63517 | opp_overlap 3309426, overlap 3309419 GCGCGAAACAAAAAA CGCACC TAGG GGTGCG TTTTTTTATGGCCGC TERM 4178 3309426 - 3309441 + T 100 -10.4 -5.60993 | opp_overlap 3309419 3309426 GCGCGAAACAAAAAA CGCACC TAGG GGTGCG TTTTTTTATGGCCGC TERM 4179 3309503 - 3309483 - T 100 -9.7 -5.31519 | opp_overlap 3309483 ACAGCCAAACAAAAA GCCCCAAAC ATC ACTTGGGGC TTCACTCACGAAAAG Shewmr7_2792 3310623 - 3309538 - | putative RNA 2'-O-ribose methyltransferase TERM 4180 3310738 - 3310689 - R 100 -13.2 -3.29471 | gap 1, opp_overlap 3310697 3310699 3310704, overlap 3310697 3310699 3310704 GCGCCAGTATAGCAA TTTCAAT-ACACAAAAGCCCGAT TTGCT ATCGGGCTTTTGTGTGATTGGCA GGATGCACCCATGGC TERM 4181 3310729 - 3310697 - R 100 -19.4 -3.10732 | opp_overlap 3310697 3310699 3310704, overlap 3310689 3310699 3310704 ATAGCAATTTCAATA CACAAAAGCCCGAT TTGCT ATCGGGCTTTTGTG TGATTGGCAGGATGC TERM 4182 3310697 - 3310729 + r 100 -19.4 -2.71364 | opp_overlap 3310689 3310697 3310699 3310704, overlap 3310699 3310704 ATAGCAATTTCAATA CACAAAAGCCCGAT TTGCT ATCGGGCTTTTGTG TGATTGGCAGGATGC TERM 4183 3310727 - 3310699 - R 100 -16.2 -3.10879 | opp_overlap 3310699 3310697 3310704, overlap 3310697 3310689 3310704 AGCAATTTCAATACA CAAAAGCCCGAT TTGCT ATCGGGCTTTTG TGTGATTGGCAGGAT TERM 4184 3310699 - 3310727 + r 100 -16.2 -2.90194 | opp_overlap 3310697 3310689 3310699 3310704, overlap 3310697 3310704 AGCAATTTCAATACA CAAAAGCCCGAT TTGCT ATCGGGCTTTTG TGTGATTGGCAGGAT TERM 4185 3310722 - 3310704 - R 100 -10.3 -4.67943 | opp_overlap 3310704 3310699 3310697, overlap 3310699 3310697 3310689 TTTCAATACACAAAA GCCCGAT TTGCT ATCGGGC TTTTGTGTGATTGGC TERM 4186 3310704 - 3310722 + r 100 -10.3 -4.614 | opp_overlap 3310699 3310697 3310689 3310704, overlap 3310699 3310697 TTTCAATACACAAAA GCCCGAT TTGCT ATCGGGC TTTTGTGTGATTGGC TERM 4187 3310742 - 3310776 + r 100 -12.8 -3.39595 | GTGTGATTGGCAGGA TGCACCCATGGCGCAG TGG CTGCGCCATACGAGCA TTATGACTCGTTACC Shewmr7_2793 3311169 - 3310777 - | hypothetical protein TERM 4188 3311118 - 3311108 - G 76 -8.2 -4.26076 | CCATGGGCACCAAAA GCGC CTA GCGC AACCGCAAAAAATCC TERM 4189 3311145 - 3311131 - G 76 -2.7 -5.09426 | overlap 3311132 CGCAACCGCAAAAAA TCCGC TTACC GCGGC GAGTAACAACAATCC Shewmr7_2794 3311928 - 3311257 - | hypothetical protein TERM 4190 3311682 - 3311701 + g 70 -4.9 -4.62069 | AGGCAAGCAACTTTG GCGCTCT GTCAGG GGGGCGC TTTTTACCATCCACA Shewmr7_2795 3312820 - 3311909 - | DNA-binding transcriptional activator GcvA TERM 4191 3312814 - 3312837 + g 70 -2.5 -4.97312 | GTGGTGGTAAGCGTC TTGACATAG TGATCT CTATCTCAA TTTTTAATTAGTTTT Shewmr7_2796 3312997 - 3313230 + | hypothetical protein TERM 4192 3313278 - 3313298 + T 100 -12.6 -4.73682 | GGTTGACAGTTTTTA GGCCAGCT CCAGT AGCTGGCC TTTTCTATTGTGCAC Shewmr7_2797 3314078 - 3313275 - | integrase catalytic subunit TERM 4193 3313509 - 3313489 - G 79 -11.1 -3.54029 | opp_overlap 3313489 3313488 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 4194 3313489 - 3313509 + g 71 -11.1 -2.79327 | opp_overlap 3313489, overlap 3313488 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 4195 3314097 - 3314123 + r 70 -5.8 -4.4078 | CGCAGCACGACATGC GGCAGCGAAG TTTATTT CTCCGTTGCC TTTTGCTTGCCAGAC Shewmr7_2798 3314503 - 3314108 - | transposase TERM 4196 3314582 - 3314555 - R 100 -11.4 -4.53036 | opp_overlap 3314560, overlap 3314560 GGACAAACAGTAAAA TAAAAGCCGCAT TCCA ATGCGGCTTTTT TGTATTCGTTTACCT TERM 4197 3314577 - 3314560 - R 100 -11.3 -5.17488 | opp_overlap 3314560, overlap 3314555 AACAGTAAAATAAAA GCCGCAT TCCA ATGCGGC TTTTTTGTATTCGTT TERM 4198 3314560 - 3314577 + r 100 -11.3 -5.50925 | opp_overlap 3314555 3314560 AACAGTAAAATAAAA GCCGCAT TCCA ATGCGGC TTTTTTGTATTCGTT Shewmr7_2799 3316116 - 3314662 - | thiamine biosynthesis protein ThiI TERM 4199 3316281 - 3316301 + r 82 -6.8 -4.85599 | opp_overlap 3316282, overlap 3316282 AATCACAAATAAAAA AGCCGTGA GCAAG TCACGGCG TTTTTATCGAATCAC TERM 4200 3316282 - 3316300 + r 80 -10.3 -3.50877 | opp_overlap 3316282, overlap 3316281 ATCACAAATAAAAAA GCCGTGA GCAAG TCACGGC GTTTTTATCGAATCA TERM 4201 3316300 - 3316282 - R 100 -10.3 -5.73978 | opp_overlap 3316282 3316281 ATCACAAATAAAAAA GCCGTGA GCAAG TCACGGC GTTTTTATCGAATCA motB 3317253 - 3316333 - | flagellar motor protein MotB Shewmr7_2801 3318024 - 3317257 - | flagellar motor protein PomA Shewmr7_2802 3318339 - 3318578 + | exodeoxyribonuclease VII small subunit Shewmr7_2803 3318581 - 3319462 + | farnesyl-diphosphate synthase TERM 4202 3319605 - 3319629 + G 74 -7.8 -4.23758 | overlap 3319606 GGGAGTTTCTTCTTA AGTCCGTTGG CATGT CCAGCGGACA TTTTGCCTCTGGACT TERM 4203 3319606 - 3319628 + G 74 -11.3 -3.13773 | overlap 3319605 GGAGTTTCTTCTTAA GTCCGTTGG CATGT CCAGCGGAC ATTTTGCCTCTGGAC TERM 4204 3319923 - 3319956 + G 70 -10.4 -2.9155 | opp_overlap 3319920 CTGGACGCAAAGTGG TCG-CCGTCATTGGCG ATGG CGCCA-TGACGGGCGG TATGGTGTTCGAGGC TERM 4205 3321176 - 3321163 - g 73 -5.2 -4.66987 | GACAGTGGAAGAAAA CGCC ATTATG GGCG GCGCAGGCTCTGGCG Shewmr7_2804 3319484 - 3321352 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 4206 3321475 - 3321423 - T 100 -11.6 -4.79451 | gap 1, opp_overlap 3321435 3321441, overlap 3321431 3321435 3321441 3321473 ACGGCAAATAGAAAA GCAACAGACAAATAAAAAGGACTGC ATCG GCAGTCCTTTTTATTAGT-TAACGC TTAACGCTCAGCGCG TERM 4207 3321468 - 3321431 - T 100 -17.3 -3.28784 | opp_overlap 3321435 3321441, overlap 3321423 3321435 3321441 TAGAAAAGCAACAGA CAAATAAAAAGGACTGC ATCG GCAGTCCTTTTTATTAG TTAACGCTTAACGCT TERM 4208 3321435 - 3321464 + T 100 -16.7 -3.35867 | opp_overlap 3321435 3321431 3321423 3321441, overlap 3321441 AAAGCAACAGACAAA TAAAAAGGACTGC ATCG GCAGTCCTTTTTA TTAGTTAACGCTTAA TERM 4209 3321464 - 3321435 - T 100 -16.7 -4.25437 | opp_overlap 3321435 3321441, overlap 3321431 3321423 3321441 AAAGCAACAGACAAA TAAAAAGGACTGC ATCG GCAGTCCTTTTTA TTAGTTAACGCTTAA TERM 4210 3321441 - 3321458 + T 100 -11.3 -5.1963 | opp_overlap 3321441 3321435 3321431 3321423, overlap 3321435 ACAGACAAATAAAAA GGACTGC ATCG GCAGTCC TTTTTATTAGTTAAC TERM 4211 3321458 - 3321441 - T 100 -11.3 -5.4433 | opp_overlap 3321435 3321441, overlap 3321435 3321431 3321423 ACAGACAAATAAAAA GGACTGC ATCG GCAGTCC TTTTTATTAGTTAAC Shewmr7_2805 3322107 - 3321496 - | GrpE protein TERM 4212 3321832 - 3321843 + g 70 -4.4 -4.62069 | opp_overlap 3321832 TAACACTGGCAGTAA TTCG TTGG CGAA TTTTTCCAATGCAAA TERM 4213 3322485 - 3322499 + G 73 -3.4 -5.03747 | CGTGATAGGTGTTAA CCGTGG CAA TCTCGG TTTTTTAACGGATTT Shewmr7_2806 3322156 - 3323085 + | NAD(+) kinase TERM 4214 3323947 - 3323965 + G 95 -11.7 -4.42062 | opp_overlap 3323945 TATATCCATGATAGT CACGGCG CTCGC CGCCGTG TTTATTTGGCAGATG Shewmr7_2807 3323837 - 3325483 + | L-lactate permease TERM 4215 3325493 - 3325522 + F 77 -6.3 -4.66833 | opp_overlap 3325495 3325496, overlap 3325496 3325500 TTCTAAGCCAAATGA AACCTAAGGCCGC GCTG GCGGCCTTAGTCA TTTTTAGCGTTGAGA TERM 4216 3325520 - 3325495 - f 100 -13.3 -4.10672 | opp_overlap 3325493 3325496 3325500, overlap 3325496 CTAAGCCAAATGAAA CCTAAGGCCGC GCTG GCGGCCTTAGT CATTTTTAGCGTTGA TERM 4217 3325519 - 3325496 - f 100 -16.8 -3.0568 | opp_overlap 3325496 3325493 3325500, overlap 3325495 TAAGCCAAATGAAAC CTAAGGCCGC GCTG GCGGCCTTAG TCATTTTTAGCGTTG TERM 4218 3325496 - 3325519 + F 100 -16.8 -3.26237 | opp_overlap 3325495 3325496, overlap 3325493 3325500 TAAGCCAAATGAAAC CTAAGGCCGC GCTG GCGGCCTTAG TCATTTTTAGCGTTG TERM 4219 3325500 - 3325515 + F 91 -11.8 -3.4158 | opp_overlap 3325496 3325495, overlap 3325496 3325493 CCAAATGAAACCTAA GGCCGC GCTG GCGGCC TTAGTCATTTTTAGC TERM 4220 3325943 - 3325974 + G 72 -10 -3.37198 | opp_overlap 3325934 3325933, overlap 3325933 3325942 AAAATCGGTCCCGAT CCGGCGACCCTTGC CTCG GCCATGGTCGGCGG TATTGTCTCTAACAA TERM 4221 3327466 - 3327443 - g 70 -3.2 -4.85129 | gap 1, opp_overlap 3327443 ACCACAGAGCAAAAA GTGTT-GGATT TCC AAGCCAAACAC TTTGGCGCCGTCAAC TERM 4222 3327557 - 3327528 - g 71 -5.7 -4.431 | gap 1 GAGTCATCCATAAAA TCACCGGCGATGGT ATC ACCAACG-CGCTGA TGAAAACTGGCCGTT Shewmr7_2808 3325547 - 3328351 + | FAD linked oxidase domain-containing protein TERM 4223 3328390 - 3328357 - f 100 -12.5 -5.41143 | opp_overlap 3328364 3328385, overlap 3328358 3328364 CAGCCGCTAAAAAAA TGCAAAACGGGGCTA GAAA TAGCCCCGTTTTTCG TTAGAAGAAAACTAT TERM 4224 3328389 - 3328358 - f 100 -16 -3.83963 | opp_overlap 3328364 3328385, overlap 3328357 3328364 AGCCGCTAAAAAAAT GCAAAACGGGGCTA GAAA TAGCCCCGTTTTTC GTTAGAAGAAAACTA TERM 4225 3328383 - 3328364 - f 100 -13.6 -4.57275 | opp_overlap 3328364, overlap 3328358 3328357 TAAAAAAATGCAAAA CGGGGCTA GAAA TAGCCCCG TTTTTCGTTAGAAGA TERM 4226 3328364 - 3328383 + F 100 -13.6 -4.8622 | opp_overlap 3328364 3328358 3328357 TAAAAAAATGCAAAA CGGGGCTA GAAA TAGCCCCG TTTTTCGTTAGAAGA Shewmr7_2809 3328653 - 3329396 + | hypothetical protein TERM 4227 3329928 - 3329908 - g 100 -10.5 -5.22312 | opp_overlap 3329911 ATCCACATGAAAAAA GAAGAAGTC GGT GACCTCTTC CATGAGAAACTCGGC Shewmr7_2810 3329407 - 3330801 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shewmr7_2811 3330803 - 3331372 + | hypothetical protein TERM 4228 3331414 - 3331402 - f 71 -4.1 -4.79174 | ATTTAACCAATAAAA CGCAA AGG TTACG GGACAATCGAAACAA TERM 4229 3331459 - 3331427 - f 81 -9.3 -3.80893 | gap 1, opp_overlap 3331430 3331434, overlap 3331430 3331434 ACGGGACAATCGAAA CAAGAAAGCCGACC TTCATT GG-CGGCTTTCTTA TTTAAAATTCAGCAT TERM 4230 3331456 - 3331430 - f 80 -8.8 -4.03167 | gap 1, opp_overlap 3331430 3331434, overlap 3331427 3331434 GGACAATCGAAACAA GAAAGCCGACC TTCATT GG-CGGCTTTC TTATTTAAAATTCAG TERM 4231 3331430 - 3331456 + F 80 -8.8 -3.96618 | gap 1, opp_overlap 3331430 3331427 3331434, overlap 3331434 GGACAATCGAAACAA GAAAGCCGACC TTCATT GG-CGGCTTTC TTATTTAAAATTCAG Shewmr7_2812 3331821 - 3332999 + | ATPase central domain-containing protein TERM 4232 3333255 - 3333265 + T 85 -4 -5.56112 | TTAGAGATTGGCCCG TCAA TAA TTGA TTTTTTACTTTTTAT TERM 4233 3333288 - 3333307 + T 71 -2 -5.20783 | opp_overlap 3333291, overlap 3333280 3333290 CTTTTTATATGGGAA CAACCAAG TATT CTTGGGCG TTTTTATATTTGAGT Shewmr7_2813 3333815 - 3333270 - | hypothetical protein Shewmr7_2814 3335170 - 3334193 - | hypothetical protein Shewmr7_2816 3335468 - 3336037 + | hypothetical protein TERM 4234 3336081 - 3336063 - T 93 -8.8 -4.51196 | opp_overlap 3336063, overlap 3336058 GTTAAACCTACAAAA GCCGCC TTTAATG GGCGGC TTTTTATTAGGATAA TERM 4235 3336063 - 3336081 + T 100 -9.5 -5.08601 | opp_overlap 3336063 3336058 GTTAAACCTACAAAA GCCGCCT TTAAT GGGCGGC TTTTTATTAGGATAA Shewmr7_2817 3336660 - 3336307 - | hypothetical protein Shewmr7_2818 3337274 - 3336807 - | hypothetical protein Shewmr7_2819 3338175 - 3339284 + | hypothetical protein TERM 4236 3340723 - 3340713 - g 79 -5.4 -4.99638 | AGAGGTAGATAAAAA GCTT CGT AAGC GTGATGAATGGCTGC Shewmr7_2820 3339274 - 3340827 + | RND efflux system outer membrane lipoprotein TERM 4237 3341407 - 3341388 - g 70 -10 -3.27476 | gap 1 ACTCTCAACTATTAA GTGC-CCGC TCG GCGGTGCAC AAAGCCGAGCGCGAT TERM 4238 3341709 - 3341686 - g 70 -4.4 -4.63928 | overlap 3341689 AGACGATGGTAAAAA GCAGGCGGTG GGTT CACTGCCAAC GGTCAGCAATAGCCG Shewmr7_2821 3340820 - 3341914 + | secretion protein HlyD family protein TERM 4239 3342451 - 3342437 - g 71 -11.4 -2.80946 | opp_overlap 3342436 3342435, overlap 3342436 AACACCCCAAAAGAC TGGCGC TAC GCGCCA CGATTATTGTCATCC Shewmr7_2822 3341923 - 3342948 + | hypothetical protein Shewmr7_2823 3342950 - 3343366 + | Ion transport 2 domain-containing protein TERM 4240 3343473 - 3343446 - T 86 -5.6 -5.31877 | gap 1, opp_overlap 3343446 AGCGACCATAAAAAA TGACAGCGTATAG ATA CC-CACGCTGCCA TTTTCGATTGATACC Shewmr7_2824 3345103 - 3343592 - | hypothetical protein TERM 4241 3344371 - 3344394 + g 73 -5.4 -4.72029 | gap 1, overlap 3344374 ATACCGACCTAAAGG TGTTATAACCC AAT GGGTTA-GACA TTTTGTTACGTTCAG Shewmr7_2825 3346683 - 3345331 - | multi anti extrusion protein MatE TERM 4242 3346920 - 3346946 + H 80 -3.8 -5.32699 | overlap 3346921 CACTTAATAACAGAT GTGGTGAAAG TCATCAT TTTTCACTAC TTTTTTGGTATTTAA TERM 4243 3346921 - 3346935 + H 71 -5 -4.7329 | overlap 3346920 ACTTAATAACAGATG TGGTGA AAG TCATCA TTTTTCACTACTTTT Shewmr7_2826 3347105 - 3348649 + | major facilitator transporter TERM 4244 3348752 - 3348733 - T 95 -7.9 -5.03314 | opp_overlap 3348733 GTGAGTCCTAAAAAA GTGAGTG TACATG CACTCAC TTTTTTATTGGATGT TERM 4245 3348733 - 3348752 + T 100 -8.6 -5.49234 | opp_overlap 3348733 GTGAGTCCTAAAAAA GTGAGTGT ACAT GCACTCAC TTTTTTATTGGATGT Shewmr7_2827 3349302 - 3348781 - | hypothetical protein TERM 4246 3349076 - 3349066 - G 70 -2.4 -5.01732 | AATTTCCTTAAAAAA GGGC TGA GCCT TAAGCTGATACACTA Shewmr7_2828 3349640 - 3350416 + | extracellular solute-binding protein Shewmr7_2829 3351598 - 3350495 - | cobalamin synthesis protein, P47K TERM 4247 3351692 - 3351676 - R 100 -15.1 -5.11112 | AAAGCTCAACAAAAA GCGCGCC AAT GGCGCGC TGAAAAATGGATAAA Shewmr7_2830 3353107 - 3351722 - | DEAD/DEAH box helicase domain-containing protein Shewmr7_2831 3356332 - 3353303 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Shewmr7_2832 3358032 - 3356443 - | starch synthase Shewmr7_2833 3359362 - 3358100 - | glucose-1-phosphate adenylyltransferase Shewmr7_2834 3361994 - 3359481 - | glycogen/starch/alpha-glucan phosphorylases TERM 4248 3359777 - 3359803 + g 82 -11.6 -3.68886 | opp_overlap 3359777, overlap 3359766 GAGACTCGGCGATAA TCCGCTGCGGTT GGT AATCGCAGCGCA TTTGGGTCACTTGCT TERM 4249 3361069 - 3361053 - G 76 -3 -5.09762 | gap 1, overlap 3361056 AGCGGAAGACAAAAA GTACTGC TGAC GCAG-AC GCAACTCTTTACCGT TERM 4250 3361925 - 3361940 + g 80 -2.5 -5.40072 | gap 1 TTGGCTTACTCGGCG CG-GCC TTAGT GGCACG TTTTTTTGGGGGAAC Shewmr7_2835 3364255 - 3361997 - | glycogen debranching enzyme GlgX TERM 4251 3363799 - 3363781 - G 91 -8.8 -4.78107 | opp_overlap 3363781, overlap 3363783 TAGCAGCATCAAAAA GGGGTCGA GTA TCGACCAC TTTGCACTTAGGTAC TERM 4252 3363781 - 3363799 + g 73 -8.8 -3.6715 | opp_overlap 3363781 3363783 TAGCAGCATCAAAAA GGGGTCGA GTA TCGACCAC TTTGCACTTAGGTAC TERM 4253 3364160 - 3364142 - G 77 -8.8 -4.08767 | GGCATGGGCCGAAAA CAGGGCGA AAT TCACCCCG CCATCATCGACCGTC Shewmr7_2836 3366489 - 3364252 - | glycogen branching enzyme TERM 4254 3365747 - 3365729 - G 73 -11 -2.87931 | opp_overlap 3365725 3365736, overlap 3365731 3365733 TGCACTTCGTAGATA GACATCGC GGC GCGATGCC AAGCTGTGGTCGCCC TERM 4255 3366245 - 3366235 - G 76 -4.6 -4.9792 | overlap 3366237 TAGCGCATACAAAAA GGGC TTA ACCC GTCTGCCAAGCGTCC TERM 4256 3366396 - 3366359 - G 76 -4.8 -5.00616 | overlap 3366362 GCGTTGCGTAAAAAA CAGCGCACCACCAAGG CCTTAC CCTCGTTGATGCAGTG CATACCGAGCAGGGA Shewmr7_2837 3368912 - 3366507 - | 4-alpha-glucanotransferase TERM 4257 3369792 - 3369773 - g 73 -5.6 -4.72272 | overlap 3369749 3369774 3369777 CGCGCCGATTAAAAA CGAGGCCG CTGT CGGCATCA GTAACAAACGGGGCA Shewmr7_2838 3369426 - 3370061 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 4258 3370080 - 3370113 + T 89 -11.9 -3.25539 | opp_overlap 3370081 3370088, overlap 3370081 3370088 AACTCTCTAGCTAAA ACTGAAAAGCACTGA ATAT TCAGTGCTTTTTAGG TATTAATTAGCATTA TERM 4259 3370112 - 3370081 - T 100 -13.2 -4.18197 | opp_overlap 3370081 3370080 3370088, overlap 3370088 ACTCTCTAGCTAAAA CTGAAAAGCACTGA ATAT TCAGTGCTTTTTAG GTATTAATTAGCATT TERM 4260 3370081 - 3370112 + T 100 -15.4 -2.54841 | opp_overlap 3370081 3370088, overlap 3370080 3370088 ACTCTCTAGCTAAAA CTGAAAAGCACTGA ATAT TCAGTGCTTTTTAG GTATTAATTAGCATT TERM 4261 3370088 - 3370105 + T 100 -9.9 -4.75308 | opp_overlap 3370081 3370088, overlap 3370081 3370080 AGCTAAAACTGAAAA GCACTGA ATAT TCAGTGC TTTTTAGGTATTAAT TERM 4262 3370105 - 3370088 - T 100 -9.9 -4.43272 | opp_overlap 3370088 3370081 3370080, overlap 3370081 AGCTAAAACTGAAAA GCACTGA ATAT TCAGTGC TTTTTAGGTATTAAT Shewmr7_2839 3370610 - 3370134 - | MarR family transcriptional regulator TERM 4263 3371500 - 3371484 - g 73 -2.9 -5.03314 | overlap 3371485 CTGATGCTGAAAAAA CCTGCGA GCC TCACAGC TGCAACAGGTATGGA Shewmr7_2840 3370938 - 3372086 + | iron-containing alcohol dehydrogenase TERM 4264 3372211 - 3372175 - f 91 -13.2 -2.70708 | gap 1, opp_overlap 3372180, overlap 3372178 3372179 3372188 AAGCTAACGACATGA GAATCGGCCCAAACAAG GGAG CTTGTTTGGGCCT-TTC TTTTGGGCTGAACCA TERM 4265 3372209 - 3372178 - f 89 -11.6 -3.49858 | opp_overlap 3372180, overlap 3372175 3372179 3372188 CTAACGACATGAGAA TCGGCCCAAACAAG GGAG CTTGTTTGGGCCTT TCTTTTGGGCTGAAC TERM 4266 3372208 - 3372179 - f 100 -15.1 -2.69433 | opp_overlap 3372180, overlap 3372178 3372175 3372188 TAACGACATGAGAAT CGGCCCAAACAAG GGAG CTTGTTTGGGCCT TTCTTTTGGGCTGAA TERM 4267 3372180 - 3372207 + F 100 -18.6 -4.67048 | opp_overlap 3372179 3372178 3372175 3372188 AACGACATGAGAATC GGCCCAAACAAG GGAG CTTGTTTGGGCC TTTCTTTTGGGCTGA TERM 4268 3372285 - 3372259 - f 73 -2.9 -5.1925 | opp_overlap 3372261 CCATAATGTAAAAAA CCGCCGTAG CGCCTTAAT CTTCGGCAG TTGGGATCCCATAGA TERM 4269 3372409 - 3372446 + F 100 -12.7 -4.07568 | opp_overlap 3372407 3372406 3372410, overlap 3372410 3372413 GCAAAAGATGAAGCC AGCTCAGAGGCCCATTC TAAG GAATGGGCCTCTGTCCC TTTTAGCGCCCACCC TERM 4270 3372445 - 3372410 - f 100 -16.2 -2.63041 | opp_overlap 3372409 3372410 3372413, overlap 3372407 3372406 CAAAAGATGAAGCCA GCTCAGAGGCCCATTC TAAG GAATGGGCCTCTGTCC CTTTTAGCGCCCACC TERM 4271 3372410 - 3372445 + F 100 -16.2 -3.04398 | opp_overlap 3372410 3372407 3372406, overlap 3372409 3372413 CAAAAGATGAAGCCA GCTCAGAGGCCCATTC TAAG GAATGGGCCTCTGTCC CTTTTAGCGCCCACC TERM 4272 3372413 - 3372442 + F 100 -20.9 -2.74605 | opp_overlap 3372410 3372407 3372406, overlap 3372410 3372409 AAGATGAAGCCAGCT CAGAGGCCCATTC TAAG GAATGGGCCTCTG TCCCTTTTAGCGCCC Shewmr7_2841 3372778 - 3373152 + | hypothetical protein TERM 4273 3373236 - 3373215 - f 81 -5.1 -5.17507 | opp_overlap 3373215 3373217, overlap 3373217 AAAACTCAATAAAAA TGCCAGAGC TAAT ACTCTGGTA TTTTGTTTTACGCAT TERM 4274 3373215 - 3373236 + F 88 -6.6 -5.08255 | opp_overlap 3373215 3373217, overlap 3373217 AAAACTCAATAAAAA TGCCAGAG CTAATA CTCTGGTA TTTTGTTTTACGCAT TERM 4275 3373217 - 3373234 + F 71 -7 -4.16397 | opp_overlap 3373215 3373217, overlap 3373215 AACTCAATAAAAATG CCAGAG CTAATA CTCTGG TATTTTGTTTTACGC Shewmr7_2842 3373484 - 3373729 + | hypothetical protein TERM 4276 3373749 - 3373720 - T 79 -10.7 -3.11118 | opp_overlap 3373721 3373722 3373724, overlap 3373718 AGAACTGACTGAAGA TTCAGAGTGACGC CCAT GCGTCACTCTGCT TTATCGGGGCTCAAT TERM 4277 3373721 - 3373748 + T 100 -14.2 -3.86897 | opp_overlap 3373720 3373718, overlap 3373722 3373724 GAACTGACTGAAGAT TCAGAGTGACGC CCAT GCGTCACTCTGC TTTATCGGGGCTCAA TERM 4278 3373722 - 3373747 + T 100 -17.7 -2.91924 | opp_overlap 3373720 3373718, overlap 3373721 3373724 AACTGACTGAAGATT CAGAGTGACGC CCAT GCGTCACTCTG CTTTATCGGGGCTCA TERM 4279 3373724 - 3373745 + T 100 -14.5 -3.01125 | opp_overlap 3373720 3373718, overlap 3373722 3373721 CTGACTGAAGATTCA GAGTGACGC CCAT GCGTCACTC TGCTTTATCGGGGCT Shewmr7_2843 3374135 - 3373767 - | thioesterase superfamily protein TERM 4280 3374329 - 3374309 - R 100 -11.9 -5.75478 | overlap 3374311 AATTAGATAAAAAAA TAGCGACTC AGA GAGTCGCCA AGCTCAGGCAAGCAA TERM 4281 3374327 - 3374311 - R 100 -12.3 -4.50122 | overlap 3374309 TTAGATAAAAAAATA GCGACTC AGA GAGTCGC CAAGCTCAGGCAAGC TERM 4282 3374422 - 3374391 - R 100 -10.1 -4.65895 | overlap 3374376 GGTTTGACTTAAAAA CCCGTGCAGCACA TGTAGG CGAACTGCACGGG GGACAACAGCTGCAA TERM 4283 3374445 - 3374429 - R 71 -8.7 -3.30124 | overlap 3374431 CTGCACGGGGGACAA CAGCTGC AAT GCAGCTA AACACAGGGTTTACG Shewmr7_2844 3375832 - 3374510 - | isocitrate lyase TERM 4284 3375888 - 3375866 - R 77 -10.6 -3.14931 | overlap 3375871 GTGATGTTGTAGCAA GTGAAGCTGC CCC ACAGCCTCAC CCTGCCCATTGGTTT Shewmr7_2845 3377625 - 3375976 - | malate synthase TERM 4285 3376908 - 3376895 - G 73 -5.3 -4.63218 | CTTTCTTCAACAAAA GCAAA CACT TTTGC CCACCAACGCGCTTC TERM 4286 3378262 - 3378240 - H 89 -7.2 -5.08015 | AACCCAAAAAATAAA TCACTTTTTT ATA AAAAAAATGA AACAAATTAGAAATC TERM 4287 3380209 - 3380221 + G 70 -2.7 -4.7497 | AACCTATATGCCCAT TGATG ATT TATCA TTTTTCGTCAATCAC Shewmr7_2846 3378461 - 3380932 + | TonB-dependent receptor TERM 4288 3380981 - 3380958 - T 100 -15.4 -4.08948 | opp_overlap 3380958 3380961, overlap 3380961 TAAGCCCATAAACAA CAAGAGAGCC CATC GGCTCTCTTG TTTTAGCTGGCAGAC TERM 4289 3380958 - 3380981 + T 100 -15.4 -4.18018 | opp_overlap 3380958 3380961, overlap 3380961 TAAGCCCATAAACAA CAAGAGAGCC CATC GGCTCTCTTG TTTTAGCTGGCAGAC TERM 4290 3380978 - 3380961 - T 100 -11.3 -4.15703 | opp_overlap 3380958 3380961, overlap 3380958 GCCCATAAACAACAA GAGAGCC CATC GGCTCTC TTGTTTTAGCTGGCA TERM 4291 3380961 - 3380978 + T 100 -11.3 -4.21812 | opp_overlap 3380961 3380958, overlap 3380958 GCCCATAAACAACAA GAGAGCC CATC GGCTCTC TTGTTTTAGCTGGCA Shewmr7_2847 3382766 - 3380997 - | potassium efflux system protein Shewmr7_2848 3384717 - 3382990 - | diguanylate cyclase Shewmr7_2849 3384993 - 3384781 - | hypothetical protein Shewmr7_2850 3385829 - 3385038 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 4292 3386266 - 3386250 - g 83 -5.1 -5.16071 | opp_overlap 3386263 AATGATCAATAAAAA GCAAAGT CTT ACCCTGC TGAGCGCCATTGCGC Shewmr7_2851 3386203 - 3386727 + | SmpA/OmlA domain-containing protein TERM 4293 3386780 - 3386756 - T 100 -11.5 -4.57837 | opp_overlap 3386762, overlap 3386762 ACACTGCCTTAAAAA CAAAAAGCGCC AAT GGCGCTTTTTT TGTGTGCTGGTATTG TERM 4294 3386774 - 3386762 - T 100 -10.5 -5.61881 | opp_overlap 3386762, overlap 3386756 CCTTAAAAACAAAAA GCGCC AAT GGCGC TTTTTTTGTGTGCTG TERM 4295 3386762 - 3386774 + T 100 -10.5 -5.74122 | opp_overlap 3386762 3386756 CCTTAAAAACAAAAA GCGCC AAT GGCGC TTTTTTTGTGTGCTG Shewmr7_2852 3387139 - 3386804 - | hypothetical protein Shewmr7_2853 3387566 - 3387129 - | cyclase/dehydrase TERM 4296 3387857 - 3387844 - g 100 -5.9 -5.63857 | overlap 3387846 AAAAACTCAAAAAAA GCCGC GCCT GCGAC GATCGCACGTAATAA smpB 3387820 - 3388311 + | SsrA-binding protein TERM 4297 3388746 - 3388775 + F 78 -10.1 -3.48772 | opp_overlap 3388741 3388749 3388753, overlap 3388753 3388770 CTCCACCAAATGATA GAACGAAGACGTC TTAG GACGTCTTTTTTC TTATCTAGAGAAATT TERM 4298 3388768 - 3388753 - f 73 -9 -3.5275 | opp_overlap 3388746 3388753, overlap 3388749 3388741 AAATGATAGAACGAA GACGTC TTAG GACGTC TTTTTTCTTATCTAG TERM 4299 3388753 - 3388768 + F 100 -9 -5.60689 | opp_overlap 3388753 3388749 3388741, overlap 3388746 AAATGATAGAACGAA GACGTC TTAG GACGTC TTTTTTCTTATCTAG TERM 4300 3389554 - 3389538 - g 72 -10.1 -3.45037 | overlap 3389536 CCAAAAAGCAGAATA TGGCGGC AAT GCCACCA GCAGAGCTCCCTGAG Shewmr7_2855 3388904 - 3390142 + | phage integrase family protein Shewmr7_2856 3390136 - 3390891 + | hypothetical protein TERM 4301 3390947 - 3390913 - f 95 -13.1 -3.22448 | opp_overlap 3390909 3390921, overlap 3390908 3390921 CGAAACTCAATGCAA GTACAAAACTGCAAT TTTTT AATGCAGTTTTGTAC CAGATCTCTAATTAA Shewmr7_2857 3391018 - 3391281 + | phage transcriptional regulator, AlpA Shewmr7_2858 3391531 - 3392094 + | hypothetical protein TERM 4302 3392412 - 3392398 - T 71 -5 -4.64676 | TCAGGTTGAAGAAAA GCAATC TCT AATTGC AATAGCCTCCCGCAT TERM 4303 3392462 - 3392451 - T 78 -5.8 -4.86385 | ACGCTGAAAAACAAA CGCA AACC TGCG CGGATGCTTGCGAGC Shewmr7_2859 3393565 - 3392612 - | hypothetical protein TERM 4304 3393518 - 3393531 + g 76 -6.7 -4.46212 | CTCTGCAACATCTTT CCACT CGCC AGTGG TTTTATCCTGCCCGA Shewmr7_2860 3394639 - 3393641 - | hypothetical protein TERM 4305 3394791 - 3394805 + r 72 -10 -2.84325 | opp_overlap 3394791, overlap 3394788 AACTTGTTGACAAAA GTCCGT ATG ACGGAC TACTCTTTGCACCAA TERM 4306 3394805 - 3394791 - R 93 -10 -4.37658 | opp_overlap 3394791 3394788 AACTTGTTGACAAAA GTCCGT ATG ACGGAC TACTCTTTGCACCAA Shewmr7_2861 3395863 - 3394895 - | Abi family protein Shewmr7_2862 3397632 - 3395863 - | restriction modification system DNA specificity subunit Shewmr7_2863 3399134 - 3397632 - | N-6 DNA methylase TERM 4307 3398091 - 3398112 + g 74 -2.1 -5.13016 | overlap 3398085 CACTATGGTGTGCAG GTTGCACTC TTCG GTGAGCAGC TTTTTGATTTTGGTT TERM 4308 3398169 - 3398183 + g 85 -12.8 -3.67976 | ATCGGGCAGCACCAC GGCGGC ACG GCCGCC TTTGCCATTGCTGGC TERM 4309 3398444 - 3398454 + g 74 -4.6 -4.82901 | TGGTACACAAGAGGT GCGG CAG CTGC TTTTTCTCAACCCCG TERM 4310 3398766 - 3398778 + g 70 -3.3 -4.84274 | GTTGATGACCTGACG CAGCA GGG TGCCG TTTTTCATGTAGTTG Shewmr7_2864 3399382 - 3399789 + | hypothetical protein TERM 4311 3399805 - 3399825 + T 85 -7.5 -4.79683 | opp_overlap 3399805 TCTAAAGAGTAAAAA GGCCTACAT CAT GTGCAGGCC TTTGTTTTATGAGTT TERM 4312 3399825 - 3399805 - T 100 -9 -4.93696 | opp_overlap 3399805 TCTAAAGAGTAAAAA GGCCTACA TCATG TGCAGGCC TTTGTTTTATGAGTT TERM 4313 3399983 - 3400025 + T 90 -11.5 -3.57561 | gap 2 ATTTACCGGCATTTT GGTTTTTT-GCTGCTC-CGCT TTG GGCGCGGGCAGCGAAAGAACC TTTGGGAACTTGGCC Shewmr7_2865 3400115 - 3399966 - | hypothetical protein TERM 4314 3400372 - 3400360 - g 100 -6.9 -6.07374 | AGAAAAAATAAAAAA GCAGC TGA GCCGC AAGACGACACCTGAA Shewmr7_2866 3400190 - 3400564 + | hypothetical protein Shewmr7_2867 3403039 - 3400574 - | EcoEI R domain-containing protein Shewmr7_2868 3403486 - 3403878 + | hypothetical protein TERM 4315 3404037 - 3404008 - T 100 -12.3 -4.93877 | opp_overlap 3404011, overlap 3404011 CCCCACCAAATAAAA CAAGGACTTAGCA GAAA TGCTAAGTCCTTT TTCTTTTCAGTGTCC TERM 4316 3404011 - 3404034 + T 100 -14 -5.48213 | opp_overlap 3404011 3404008 CACCAAATAAAACAA GGACTTAGCA GAAA TGCTAAGTCC TTTTTCTTTTCAGTG TERM 4317 3404034 - 3404011 - T 100 -14 -4.56436 | opp_overlap 3404011, overlap 3404008 CACCAAATAAAACAA GGACTTAGCA GAAA TGCTAAGTCC TTTTTCTTTTCAGTG TERM 4318 3404444 - 3404454 + T 73 -5.4 -4.74013 | AGGAAGAGTGCGAAT TTCG TGT CGAA TTTTCTCTGTTTCGC TERM 4319 3404524 - 3404568 + T 70 -7.9 -3.70902 | overlap 3404528 CTGCGTGGTTTTTTA TGGACGCGGGTTCAGTTCCTA ATA TGAGAATTGAACCCGAGTTGA TTTAGATGTGGCCAA TERM 4320 3404528 - 3404564 + T 83 -10.9 -3.55866 | overlap 3404524 GTGGTTTTTTATGGA CGCGGGTTCAGTTCCTA ATA TGAGAATTGAACCCGAG TTGATTTAGATGTGG TERM 4321 3404720 - 3404673 - T 100 -12.8 -3.63266 | opp_overlap 3404701, overlap 3404679 3404701 AAAATTTAGCTCAAA TCCAAACTGACAGCGGCCCACT AAAA AATGGGCAACGGCCAGTTTAGA TCTGAGCGAGTACAG TERM 4322 3404714 - 3404679 - T 75 -8.2 -3.85165 | opp_overlap 3404701, overlap 3404673 3404701 TAGCTCAAATCCAAA CTGACAGCGGCCCACT AAAA AATGGGCAACGGCCAG TTTAGATCTGAGCGA TERM 4323 3404713 - 3404701 - T 75 -3.3 -5.14563 | opp_overlap 3404701, overlap 3404679 3404673 CGGCCCACTAAAAAA TGGGC AAC GGCCA GTTTAGATCTGAGCG Shewmr7_2869 3406441 - 3404741 - | hypothetical protein Shewmr7_2870 3408685 - 3406451 - | hypothetical protein TERM 4324 3408271 - 3408292 + g 71 -5.7 -4.41616 | CAAGGCCGCGCTCTG CCAGCATGG CTTG CCAGGCCGG TTTATTTAACGCGCT TERM 4325 3409410 - 3409389 - R 95 -7.3 -5.4505 | opp_overlap 3409388 3409389 GCCGCTAATAAAAAA GCACAACCC AATT AAGTTGTGC CTTTTAGATTAAATA Shewmr7_2871 3409750 - 3409448 - | heavy metal transport/detoxification protein Shewmr7_2872 3410064 - 3409747 - | mercuric transport protein MerT, putative TERM 4326 3410060 - 3410040 - G 74 -11.1 -3.13743 | AAAGGCTAGAGGCAA CCGCCGC AACAACG GCGGCGG TCATGGTCGCAAACA TERM 4327 3410069 - 3410094 + r 71 -9 -3.2534 | opp_overlap 3410074, overlap 3410067 3410079 GCGGCGGTCATGGTC GCAAACAGCG GTTTAG CGCTGTTCGC TTGACTTGTAGTCAT Shewmr7_2873 3411220 - 3410081 - | twin-arginine translocation pathway signal TERM 4328 3411110 - 3411099 - G 82 -7.2 -4.66537 | opp_overlap 3411106, overlap 3411100 3411101 TTCGTTAAGATAAAA CGGC GACG GCCG CAGGCCTTATCGGCC TERM 4329 3411448 - 3411423 - R 100 -6.9 -5.88197 | opp_overlap 3411423 TCAAAGACAAAAAAA CAGGTATAGCA CGAC TGGCATACCTG TTTGTAAAGGAGGTA Shewmr7_2874 3412740 - 3411469 - | HAAAP family transport protein TERM 4330 3412828 - 3412813 - H 100 -6.2 -5.68438 | TCAGCAAACAAAAAA TTCAAC TTTT GTTGAA CAAAGTGTCGCCGCT TERM 4331 3412950 - 3412931 - H 76 -2.9 -5.38326 | overlap 3412933 GCAACTAAACAAAAA TATGCAA ATAATA TTGCACA TAGAAATTCGATAGC Shewmr7_2875 3412997 - 3413380 + | putative endoribonuclease L-PSP TERM 4332 3414087 - 3414077 - g 87 -8.2 -4.77036 | CCGTACCATGAAAAA CGGC ATT GCCG CTGGGATCATCGGTG Shewmr7_2876 3413403 - 3414677 + | hypothetical protein Shewmr7_2877 3414719 - 3415399 + | YheO domain-containing protein TERM 4333 3415403 - 3415434 + T 100 -19 -5.5074 | opp_overlap 3415403 3415407 AGCCTCGCTTAAAAA CAAAGGGCTAAGAT GTTC ATCTTAGCCCTTTG TTTTTTATTAGCTTG TERM 4334 3415434 - 3415403 - T 100 -19 -4.56775 | opp_overlap 3415403, overlap 3415407 AGCCTCGCTTAAAAA CAAAGGGCTAAGAT GTTC ATCTTAGCCCTTTG TTTTTTATTAGCTTG TERM 4335 3415430 - 3415407 - T 100 -14 -4.85782 | opp_overlap 3415403, overlap 3415403 TCGCTTAAAAACAAA GGGCTAAGAT GTTC ATCTTAGCCC TTTGTTTTTTATTAG Shewmr7_2878 3417208 - 3415478 - | hypothetical protein TERM 4336 3417045 - 3417034 - G 76 -5.8 -4.74103 | overlap 3417035 GGCCTAAGGCAAAAA TGGC TAGC GCCA CGCCAACCCAGGGGA TERM 4337 3417054 - 3417064 + g 100 -6.8 -5.75342 | AGCGCCACGCCAACC CAGG GGA CCTG TTTTTTTTCCACGAC TERM 4338 3417255 - 3417225 - R 100 -14.2 -4.08216 | opp_overlap 3417232, overlap 3417227 3417232 CCATCGGCCTTAAAA CATAAAAGCAGCGA ATA TCGCTGCTTTTATT CACATTAACCACAGG TERM 4339 3417253 - 3417227 - R 100 -16.8 -3.63922 | opp_overlap 3417232, overlap 3417225 3417232 ATCGGCCTTAAAACA TAAAAGCAGCGA ATA TCGCTGCTTTTA TTCACATTAACCACA TERM 4340 3417248 - 3417232 - R 100 -12.3 -4.89567 | opp_overlap 3417232, overlap 3417227 3417225 CCTTAAAACATAAAA GCAGCGA ATA TCGCTGC TTTTATTCACATTAA TERM 4341 3417232 - 3417248 + r 100 -12.3 -4.68103 | opp_overlap 3417232 3417227 3417225 CCTTAAAACATAAAA GCAGCGA ATA TCGCTGC TTTTATTCACATTAA TERM 4342 3417285 - 3417267 - R 70 -9.6 -2.82023 | opp_overlap 3417267, overlap 3417264 3417269 TATTCACATTAACCA CAGGATTG GCT CAATCCCG TTTGCCGACCTTCTC Shewmr7_2879 3418191 - 3417277 - | hypothetical protein Shewmr7_2880 3418429 - 3418923 + | hypothetical protein TERM 4343 3419217 - 3419185 - g 95 -11.9 -4.30719 | opp_overlap 3419182, overlap 3419186 CGCGGCCATAACAAA CGCGTGCAGCAAGGC AGC GCCGTGCTGCATGCC GAAATGGATTGCCTC TERM 4344 3419216 - 3419186 - g 89 -15.4 -3.1811 | opp_overlap 3419182, overlap 3419185 GCGGCCATAACAAAC GCGTGCAGCAAGGC AGC GCCGTGCTGCATGC CGAAATGGATTGCCT Shewmr7_2881 3419065 - 3419502 + | cytosine deaminase TERM 4345 3419606 - 3419626 + F 70 -2.6 -5.0538 | gap 1, overlap 3419609 ATTATCAACTCAATC TTG-CCGAG CTGA CTCGGTTAA TTTTTTCCAATAGCA TERM 4346 3419609 - 3419622 + F 74 -8.1 -3.93769 | overlap 3419606 ATCAACTCAATCTTG CCGAG CTGA CTCGG TTAATTTTTTCCAAT Shewmr7_2882 3419647 - 3420891 + | hypothetical protein Shewmr7_2883 3420869 - 3421372 + | hypothetical protein Shewmr7_2884 3421989 - 3421381 - | TetR family transcriptional regulator Shewmr7_2885 3422241 - 3422720 + | HPP family protein TERM 4347 3422764 - 3422741 - T 73 -6 -4.55826 | GTCAAAACACTAAAA CCTTAACGTG TTAA CACATTTAGG CGTGAAGTGGCTAAA TERM 4348 3422833 - 3422806 - T 78 -7.1 -4.57533 | opp_overlap 3422811 3422825, overlap 3422807 AAGAAGAGGATAAAA TTAAAGGGCAA GTGAGA TTGCCCTTTAT CAAAACGGCTCACTT TERM 4349 3422832 - 3422807 - T 78 -10.6 -3.32893 | opp_overlap 3422811 3422825, overlap 3422806 AGAAGAGGATAAAAT TAAAGGGCAA GTGAGA TTGCCCTTTA TCAAAACGGCTCACT Shewmr7_2886 3424182 - 3422854 - | short chain fatty acid transporter TERM 4350 3423862 - 3423842 - G 71 -6.1 -4.30416 | overlap 3423844 ACCACTAAGCCAAAA CCCCAGTTA ATC CAACTGGCG GCGAGGGAAACCAAG TERM 4351 3424562 - 3424532 - g 100 -8.2 -5.46706 | opp_overlap 3424536 AGCGCAAAACAAAAA CCAAGAAGGGGTGA AAA CCACCGCCTCTGGG TTGCAATATCAAGTG Shewmr7_2887 3424404 - 3424874 + | peptidylprolyl isomerase, FKBP-type TERM 4352 3424914 - 3424890 - T 100 -17.3 -4.87626 | opp_overlap 3424890 3424894, overlap 3424894 TTTCAATATTAAAAA CAAAGCCATGC ACT GCATGGCTTTG TTCTATTTAGGCGCT TERM 4353 3424890 - 3424914 + T 100 -17.3 -3.81755 | opp_overlap 3424890 3424894, overlap 3424894 TTTCAATATTAAAAA CAAAGCCATGC ACT GCATGGCTTTG TTCTATTTAGGCGCT TERM 4354 3424910 - 3424894 - T 100 -12.3 -4.95618 | opp_overlap 3424890 3424894, overlap 3424890 AATATTAAAAACAAA GCCATGC ACT GCATGGC TTTGTTCTATTTAGG TERM 4355 3424894 - 3424910 + T 100 -12.3 -4.52143 | opp_overlap 3424894 3424890, overlap 3424890 AATATTAAAAACAAA GCCATGC ACT GCATGGC TTTGTTCTATTTAGG Shewmr7_2888 3427547 - 3424941 - | glycosyl hydrolase family chitinase TERM 4356 3425388 - 3425400 + g 76 -7.7 -4.4009 | TGGCGCCGTCACCAC CAGTG TGG CACTG TTTTGTCCACTCGCC TERM 4357 3428087 - 3428032 - R 100 -10.5 -5.06414 | opp_overlap 3428032, overlap 3428034 GGGTGCGAATAAAAA TACGGCCATTGAATCGGTGCGCTTC AATACA GAAGCACTCTTATCCAATGACCGCA TGATTTTTATCTTTA TERM 4358 3428085 - 3428034 - R 93 -10.9 -4.16307 | opp_overlap 3428032, overlap 3428032 GTGCGAATAAAAATA CGGCCATTGAATCGGTGCGCTTC AATACA GAAGCACTCTTATCCAATGACCG CATGATTTTTATCTT Shewmr7_2889 3428981 - 3428190 - | ROK family protein TERM 4359 3428887 - 3428899 + g 70 -3.3 -4.82162 | TCAATTTTAAAGCCT TCACC CGT GGGGA TTTTATATTGTTCTG TERM 4360 3430234 - 3430212 - g 76 -7.6 -4.36914 | overlap 3430214 3430215 CGCTTGGGCACAAAA TATCGCCCGC GAT GCAGGCGCCA AGTTAATTGCCGGTA TERM 4361 3430232 - 3430214 - g 70 -8 -3.79419 | overlap 3430212 3430215 CTTGGGCACAAAATA TCGCCCGC GAT GCAGGCGC CAAGTTAATTGCCGG TERM 4362 3430231 - 3430215 - g 73 -11.5 -2.8733 | overlap 3430214 3430212 TTGGGCACAAAATAT CGCCCGC GAT GCAGGCG CCAAGTTAATTGCCG TERM 4363 3430303 - 3430284 - g 70 -2.1 -5.00642 | gap 1, overlap 3430286 3430297 TAAGGCACAGAAAAA TG-CCGCC GAATT AGCGGGCA TGCGCGCCAGCCATA Shewmr7_2890 3429343 - 3431160 + | peptidase M24 TERM 4364 3431180 - 3431199 + F 100 -9.3 -5.06414 | opp_overlap 3431180 CGTTCAACACGAAAA CCCAAGC CCCAGT GCTTGGG TTTTTATTAGAAACA TERM 4365 3431199 - 3431180 - f 95 -9.3 -4.4261 | opp_overlap 3431180 CGTTCAACACGAAAA CCCAAGC CCCAGT GCTTGGG TTTTTATTAGAAACA TERM 4366 3431538 - 3431525 - f 70 -3.9 -4.88388 | overlap 3431533 ATAACCCCACAAAAA TGATA CCAT TATCA CATAATAAGCCGACT TERM 4367 3432112 - 3432129 + G 73 -11.3 -2.90227 | overlap 3432111 AGCGATTTGTGTCTG CCGTGGT GGCC ACCACGG GTTTACTGATTGCAG Shewmr7_2891 3431628 - 3433196 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Shewmr7_2892 3433523 - 3434824 + | DEAD/DEAH box helicase domain-containing protein TERM 4368 3434904 - 3434873 - T 100 -11 -4.82901 | opp_overlap 3434881, overlap 3434874 3434881 GTCTCGTTATAAAAA GCAAAAAAGCGTCC TAAG GGACGCTTTTTTAT TGAGCCGAAACAATG TERM 4369 3434903 - 3434874 - T 100 -14.5 -3.49419 | opp_overlap 3434881, overlap 3434873 3434881 TCTCGTTATAAAAAG CAAAAAAGCGTCC TAAG GGACGCTTTTTTA TTGAGCCGAAACAAT TERM 4370 3434881 - 3434896 + T 100 -10.4 -5.4505 | opp_overlap 3434881 3434874 3434873 ATAAAAAGCAAAAAA GCGTCC TAAG GGACGC TTTTTTATTGAGCCG TERM 4371 3434896 - 3434881 - T 100 -10.4 -5.56112 | opp_overlap 3434881, overlap 3434874 3434873 ATAAAAAGCAAAAAA GCGTCC TAAG GGACGC TTTTTTATTGAGCCG Shewmr7_2893 3435948 - 3435055 - | hypothetical protein Shewmr7_2894 3436256 - 3436903 + | redoxin domain-containing protein TERM 4372 3436920 - 3436955 + F 70 -7.1 -3.75437 | gap 2 CCTAGATAAACCATC GCAGCCAGTAAGAATCG TTAT CGATT-T-ATTGGCTGC TTTGCTAAACTAGTT Shewmr7_2895 3437033 - 3437668 + | hypothetical protein TERM 4373 3437814 - 3437829 + G 76 -6.1 -4.73613 | GGTATTTCCTATCGT TGGCG AGTAAA CGCCA TTTTGTTACTGCTAC Shewmr7_2896 3437787 - 3438536 + | hypothetical protein TERM 4374 3438579 - 3438604 + T 86 -9.8 -4.05788 | gap 1, opp_overlap 3438579 3438578 3438575, overlap 3438582 TATTGCAACCATAAG CTT-GCCAGCC AAGAA GGCTGGCTAAG TTTAGTTTCCGCAAA TERM 4375 3438604 - 3438579 - T 71 -9.8 -2.70774 | gap 1, opp_overlap 3438579 3438582, overlap 3438578 3438575 TATTGCAACCATAAG CTT-GCCAGCC AAGAA GGCTGGCTAAG TTTAGTTTCCGCAAA TERM 4376 3438582 - 3438600 + T 81 -11.7 -2.73676 | opp_overlap 3438579 3438578 3438575, overlap 3438579 TGCAACCATAAGCTT GCCAGCC AAGAA GGCTGGC TAAGTTTAGTTTCCG Shewmr7_2897 3438955 - 3438647 - | hypothetical protein Shewmr7_2898 3439620 - 3439060 - | PfpI family intracellular peptidase TERM 4377 3439264 - 3439287 + g 71 -6.7 -4.1891 | opp_overlap 3439239 CGTCAGTAGCTGCGC CCCATGGCA AACGGC TGCAATGGG TTTATCTTGGGCGGC TERM 4378 3439521 - 3439493 - G 70 -10.3 -3.02263 | ATAGCGGTCTTAATA GTTTGCCCCGCCA CTT TATCAGGGCAAAC AACCGTCACATTGTG TERM 4379 3439756 - 3439743 - R 100 -9.5 -5.64274 | opp_overlap 3439743 TCAGGCATAAAAAAA GCGCC CGCA GGCGC TTTAATCTAAACATT TERM 4380 3439743 - 3439756 + r 81 -9.5 -3.8377 | opp_overlap 3439743 TCAGGCATAAAAAAA GCGCC CGCA GGCGC TTTAATCTAAACATT Shewmr7_2899 3441554 - 3439776 - | band 7 protein TERM 4381 3440524 - 3440546 + g 85 -7.6 -4.77036 | overlap 3440526 3440528 GCGGACTCTTCTTCC GACTTCGCGG CTA CCGCGATGTG TTTTTCCTGCTCGGC TERM 4382 3440526 - 3440544 + g 84 -10.2 -4.00443 | overlap 3440524 3440528 GGACTCTTCTTCCGA CTTCGCGG CTA CCGCGATG TGTTTTTCCTGCTCG TERM 4383 3440528 - 3440542 + g 79 -11.4 -3.58504 | overlap 3440526 3440524 ACTCTTCTTCCGACT TCGCGG CTA CCGCGA TGTGTTTTTCCTGCT Shewmr7_2900 3442223 - 3441588 - | hypothetical protein TERM 4384 3442334 - 3442324 - R 84 -2.6 -5.63517 | TTTCCAAACAAAAAA TTTA CCC TAAA ACGGATTTTGACTAA Shewmr7_2901 3442896 - 3442330 - | hypothetical protein Shewmr7_2902 3442966 - 3444471 + | carboxypeptidase Taq Shewmr7_2903 3444590 - 3445084 + | GCN5-related N-acetyltransferase Shewmr7_2904 3445081 - 3445434 + | hypothetical protein Shewmr7_2905 3445472 - 3445729 + | hypothetical protein Shewmr7_2906 3445769 - 3446278 + | RDD domain-containing protein TERM 4385 3446361 - 3446346 - T 100 -10.4 -5.4505 | opp_overlap 3446346 TGCCCCAATAAAAAA CGACGC CATG GCGTCG TTTTTTATTACCCGC TERM 4386 3446346 - 3446361 + T 100 -10.4 -5.4505 | opp_overlap 3446346 TGCCCCAATAAAAAA CGACGC CATG GCGTCG TTTTTTATTACCCGC Shewmr7_2907 3447441 - 3446383 - | permease YjgP/YjgQ family protein Shewmr7_2908 3448550 - 3447438 - | permease YjgP/YjgQ family protein Shewmr7_2909 3448806 - 3450314 + | leucyl aminopeptidase TERM 4387 3450334 - 3450352 + F 100 -13.2 -5.65927 | opp_overlap 3450334 TAATAGCACTGAAAA GGCGAAGA ATT TCTTCGCC TTTTTTATTTGGCTC TERM 4388 3450352 - 3450334 - f 100 -13.2 -4.23723 | opp_overlap 3450334 TAATAGCACTGAAAA GGCGAAGA ATT TCTTCGCC TTTTTTATTTGGCTC TERM 4389 3450606 - 3450578 - f 82 -5.9 -5.05577 | opp_overlap 3450584, overlap 3450584 AAACGAAAGTAAAAA TCCAAAGCCTCCC ACT GGGAGGCTTTTTC GTCTTAAACGCTCGA TERM 4390 3450600 - 3450584 - f 100 -13.7 -4.02315 | opp_overlap 3450584, overlap 3450578 AAGTAAAAATCCAAA GCCTCCC ACT GGGAGGC TTTTTCGTCTTAAAC TERM 4391 3450584 - 3450600 + F 100 -13.7 -4.87626 | opp_overlap 3450578 3450584 AAGTAAAAATCCAAA GCCTCCC ACT GGGAGGC TTTTTCGTCTTAAAC TERM 4392 3450963 - 3450953 - g 70 -3.2 -4.84529 | CCAGAAACCCAAAAA CAGC AGT ACTG TATCGCTTACCTTGG Shewmr7_2910 3450647 - 3452650 + | prephenate dehydratase / chorismate mutase TERM 4393 3452705 - 3452677 - T 100 -14.7 -3.71888 | opp_overlap 3452679, overlap 3452679 AAGGATACTGAAGAA CATACAGCCACGA ATA TCGTGGCTGTATT GTTTAGGACTTAGGA TERM 4394 3452703 - 3452679 - T 100 -17.3 -3.43446 | opp_overlap 3452679, overlap 3452677 GGATACTGAAGAACA TACAGCCACGA ATA TCGTGGCTGTA TTGTTTAGGACTTAG TERM 4395 3452679 - 3452703 + T 100 -17.3 -3.94 | opp_overlap 3452679 3452677 GGATACTGAAGAACA TACAGCCACGA ATA TCGTGGCTGTA TTGTTTAGGACTTAG Shewmr7_2911 3454100 - 3452796 - | sodium/hydrogen exchanger TERM 4396 3453884 - 3453868 - G 76 -5.1 -4.84673 | GCAAACAAGAGAAAA CCCAACA TGC CGTTGAG TAACAGGGCCTGAAA Shewmr7_2912 3454481 - 3454146 - | hypothetical protein Shewmr7_2913 3455787 - 3454645 - | oxidoreductase FAD-binding subunit TERM 4397 3455817 - 3455792 - R 76 -11.2 -2.64616 | overlap 3455811 TTTGTATCCATAGCA CCGCGGCTTT ACAACG AAAGCCGCAG TGACCCATGCGTCAA Shewmr7_2914 3457502 - 3455838 - | hydroxylamine reductase TERM 4398 3455950 - 3455940 - G 82 -8.2 -4.56775 | overlap 3455942 ATTCGCCGTTAAAAA CGCC GGC GGCG TTGGGCCGGTACGGA TERM 4399 3457676 - 3457694 + r 100 -8.9 -4.88067 | opp_overlap 3457676 AAACCCTAAAAAAAA TGCCCAT CAAAT ATGGGCA TTTTTATGGCTAACT TERM 4400 3457694 - 3457676 - R 100 -8.9 -5.82388 | opp_overlap 3457676 AAACCCTAAAAAAAA TGCCCAT CAAAT ATGGGCA TTTTTATGGCTAACT tyrA 3458858 - 3457719 - | bifunctional chorismate mutase/prephenate dehydrogenase Shewmr7_2916 3460012 - 3458921 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 4401 3460381 - 3460414 + r 70 -5.4 -4.43477 | gap 1, opp_overlap 3460405 TTCTGCCGCGTTATC GTCCGTTTA-TGTAG AATAA CTACACTGCACGGAC TTTTCCTTGCATAAA TERM 4402 3460640 - 3460612 - R 100 -14 -3.09234 | opp_overlap 3460619, overlap 3460619 ATAAACTTTAGGCAA CAAAAAACCGCC ACGAG GGCGGTTTTCTG TGCGAACACTACGTC TERM 4403 3460633 - 3460619 - R 100 -8.5 -5.4833 | opp_overlap 3460619, overlap 3460612 TTAGGCAACAAAAAA CCGCC ACGAG GGCGG TTTTCTGTGCGAACA TERM 4404 3460619 - 3460633 + r 87 -8.5 -4.52589 | opp_overlap 3460619 3460612 TTAGGCAACAAAAAA CCGCC ACGAG GGCGG TTTTCTGTGCGAACA rplS 3461031 - 3460678 - | 50S ribosomal protein L19 TERM 4405 3460997 - 3461012 + g 76 -7.6 -4.36063 | overlap 3461001 ACGTCTTGTTTCATT TGCTCA TCGT TGAGCA TTTTAATGATGTTGT trmD 3461812 - 3461066 - | tRNA (guanine-N(1)-)-methyltransferase TERM 4406 3461320 - 3461292 - G 77 -9.5 -3.75665 | opp_overlap 3461311, overlap 3461293 GGACAGTCCAGTAAA CCGTCGGAGAAAG AAT CTTGCTCCGCCGA AGCTTGTTTTCCTAG rimM 3462358 - 3461828 - | 16S rRNA-processing protein rpsP 3462627 - 3462379 - | 30S ribosomal protein S16 TERM 4407 3462614 - 3462630 + g 71 -6.5 -4.22652 | opp_overlap 3462614 CCACCACGAGCTAAA CGAATGG TAA CCATGCG TTTTCAATCCTCTAA TERM 4408 3462701 - 3462672 - R 84 -2.7 -5.67529 | opp_overlap 3462672 AAGCAAAAATAAAAA CTGGAACCCCGTG TTCG CGAAGAGTCCCAG ATAGAAAGCCGGAAG Shewmr7_2921 3464219 - 3462846 - | signal recognition particle protein TERM 4409 3463031 - 3463047 + g 73 -5.1 -4.6856 | GGCGCTTACGTGAGC CCTTGAT TAA ATCGGGG TTTTTACGCTCTTTC TERM 4410 3463179 - 3463191 + g 70 -3.4 -4.83269 | TTCAATCATGCTCAT CATG CCGCC CATG TTTTTCATCTGCTGT TERM 4411 3463821 - 3463805 - G 71 -7.9 -3.99324 | opp_overlap 3463798 CCGCAGGACGATAAA CGTCGGC GCT GACGACG AGTACCGATTTTTTA Shewmr7_2922 3464553 - 3465341 + | cytochrome c assembly protein TERM 4412 3465387 - 3465345 - f 100 -13.7 -3.67775 | opp_overlap 3465341 3465355 ATTCTTAGTTAATAA TTTCAAGTCAGCTTAGG CGCTTATTC CCTAAGCTGACTTGACA CTCCGTGTATTTCTC TERM 4413 3466543 - 3466532 - g 71 -5.8 -4.30977 | overlap 3466528 AATAAAGAAATGAAA TGGG ACTT CCCA ACCGATGGCCCCAAA Shewmr7_2923 3465443 - 3466714 + | hypothetical protein TERM 4414 3468337 - 3468327 - g 76 -3.2 -5.14563 | overlap 3468308 TTTCTTATCAAAAAA CCAA GAG TCGG AAGATAATTTCGAAC Shewmr7_2924 3467023 - 3468447 + | hypothetical protein Shewmr7_2925 3469009 - 3468488 - | hypothetical protein TERM 4415 3469142 - 3469157 + r 89 -10.4 -3.99324 | opp_overlap 3469142 TTACGCAGTAAAAAA GGGAGC TAAG GCTCCC TTTGTGCTAATGGGA TERM 4416 3469157 - 3469142 - R 100 -10.4 -5.1675 | opp_overlap 3469142 TTACGCAGTAAAAAA GGGAGC TAAG GCTCCC TTTGTGCTAATGGGA Shewmr7_2926 3469562 - 3469179 - | holo-acyl-carrier-protein synthase Shewmr7_2927 3470299 - 3469562 - | pyridoxal phosphate biosynthetic protein PdxJ Shewmr7_2928 3471090 - 3470389 - | DNA repair protein RecO TERM 4417 3470944 - 3470934 - G 76 -5.4 -4.81249 | CGCTAAATTCAAAAA TCAG CGG CTGA AAGGGCTGGAGGATA era 3472159 - 3471140 - | GTP-binding protein Era TERM 4418 3471481 - 3471471 - G 71 -5.4 -4.49337 | TCAGAAGCCATAAAA CGTT GCG AACG GTCGGTCACATAATC Shewmr7_2930 3472836 - 3472156 - | RNAse III TERM 4419 3472786 - 3472770 - G 72 -9.5 -3.35798 | ACGCTTGAGTCAGAA GTTCAAG GTT CTTGAAC TCATAACCCAAAGTA Shewmr7_2931 3473755 - 3472838 - | signal peptidase I TERM 4420 3473242 - 3473257 + g 73 -5.4 -4.68593 | gap 1, overlap 3473244 3473245 CTGGACAATGGGTTT GCTCTGC GCC GCAG-GC TTTTTGGATCATCAA TERM 4421 3473904 - 3473886 - R 100 -16 -3.97057 | opp_overlap 3473876 3473873 3473872, overlap 3473896 GATAAGCTAAGTAAA GCGCCGCA AAC TGCGGCGC AATAATAGCTAAATT TERM 4422 3473929 - 3473941 + r 72 -7.7 -3.76952 | TAAATTGTGTTATCT CGAGT GTT ACTCG TTTAGCTTAAGTACC Shewmr7_2932 3475725 - 3473935 - | GTP-binding protein LepA TERM 4423 3474420 - 3474450 + g 70 -4.7 -4.65895 | gap 1, opp_overlap 3474405 3474429, overlap 3474395 CGGCCACCTGATTGC CGTGGTAAACCATG TTCA CTTGGG-TACCACG TTTTTCGATACACAA TERM 4424 3475310 - 3475328 + g 76 -6 -4.64676 | GCTACGCGCTCAGGA TCGGCTTG GGG TAAGTCGA TTTTGTTCAGGATAG Shewmr7_2933 3476366 - 3475893 - | positive regulator of sigma(E), RseC/MucC Shewmr7_2934 3477310 - 3476378 - | sigma E regulatory protein, MucB/RseB TERM 4425 3477170 - 3477153 - G 76 -8.4 -4.21322 | TGAAGATAAACCAAA GGCCGA ATATGG TCGGCC TGAAGTTGTATAATC Shewmr7_2935 3477946 - 3477323 - | anti sigma-E protein, RseA TERM 4426 3477979 - 3477996 + r 100 -7.7 -5.31456 | overlap 3477980 TTAAGGGTGTTACTC TTCCAGC AATG GCTGGAG TTTTTTGTCGATTGC TERM 4427 3477980 - 3477995 + r 78 -9 -3.77789 | overlap 3477979 TAAGGGTGTTACTCT TCCAGC AATG GCTGGA GTTTTTTGTCGATTG Shewmr7_2936 3478551 - 3477973 - | RNA polymerase sigma factor RpoE Shewmr7_2937 3478741 - 3480354 + | L-aspartate oxidase TERM 4428 3480415 - 3480374 - T 95 -11.7 -3.80625 | opp_overlap 3480380, overlap 3480376 3480380 GTTGCATAATGTAAA TATTAAGCGGGCTAAATCT ACTC AGATTTAGCCCGCTTTGTT TAGTCAAACTAAAAT TERM 4429 3480413 - 3480376 - T 100 -14.3 -3.48766 | opp_overlap 3480380, overlap 3480374 3480380 TGCATAATGTAAATA TTAAGCGGGCTAAATCT ACTC AGATTTAGCCCGCTTTG TTTAGTCAAACTAAA TERM 4430 3480380 - 3480409 + T 100 -19.5 -4.49556 | opp_overlap 3480376 3480374 3480380 TAATGTAAATATTAA GCGGGCTAAATCT ACTC AGATTTAGCCCGC TTTGTTTAGTCAAAC TERM 4431 3480409 - 3480380 - T 100 -19.5 -3.481 | opp_overlap 3480380, overlap 3480376 3480374 TAATGTAAATATTAA GCGGGCTAAATCT ACTC AGATTTAGCCCGC TTTGTTTAGTCAAAC Shewmr7_2938 3480928 - 3480488 - | hypothetical protein TERM 4432 3480887 - 3480865 - G 100 -14.2 -5.4433 | AGACACAAACAAAAA CGACCAACGA GAG TCGCTGGTCG AAGGAGGCTTTTACA Shewmr7_2939 3481148 - 3480909 - | hypothetical protein TERM 4433 3481250 - 3481223 - R 86 -12.2 -3.05935 | gap 1, opp_overlap 3481219 3481229 AGAGTGTCGATGCAA GCAGTGCTGAAAC TCG GTTT-AGCACTGC TGGACTTGGCTGTCT nhaR 3482149 - 3481241 - | transcriptional activator NhaR TERM 4434 3482198 - 3482174 - R 93 -14.3 -2.52464 | overlap 3482142 3482159 GCTTCCTCTAAGGGA TGCCGCAACCC TTA AGGCTGCGGCA TGTCGGATCGCAATG Shewmr7_2941 3482631 - 3482245 - | hypothetical protein Shewmr7_2942 3483803 - 3482634 - | Na+/H+ antiporter NhaA TERM 4435 3483872 - 3483909 + r 83 -9.3 -3.92542 | gap 1, opp_overlap 3483863 3483881 GTATAATCGATAGTT TCGACGAAACACCTCG TTAATTC CGAGGTG-TTAGTCGA TTATTTAGCCATCAA TERM 4436 3483901 - 3483881 - R 73 -8.3 -3.73402 | opp_overlap 3483872 ATAGTTTCGACGAAA CACCTCG TTAATTC CGAGGTG TTAGTCGATTATTTA thyA 3484715 - 3483921 - | thymidylate synthase TERM 4437 3484293 - 3484272 - G 82 -7.3 -4.69622 | gap 1, opp_overlap 3484272, overlap 3484276 ATAGAATTGGAAAAA GGCA-TGGCA AGG TGCCAACGCC ATTTTATCCAGCTCG Shewmr7_2944 3485521 - 3484715 - | prolipoprotein diacylglyceryl transferase Shewmr7_2945 3486367 - 3485567 - | hypothetical protein Shewmr7_2946 3488660 - 3486426 - | phosphoenolpyruvate-protein phosphotransferase PtsP TERM 4438 3488298 - 3488309 + g 85 -7.2 -4.75372 | opp_overlap 3488297 CTGCACCACAATTAC GCCG ACTA CGGC TTTTTGATAAATAAT Shewmr7_2947 3489208 - 3488684 - | dinucleoside polyphosphate hydrolase TERM 4439 3489348 - 3489380 + H 70 -7.8 -3.57462 | overlap 3489350 AAAGGATTAACCTCT AGGGGATATCCACA TTTTC TGTGGATATCTCTG TTTGAAACTAGGGTA TERM 4440 3489350 - 3489378 + H 95 -12.6 -3.36515 | overlap 3489348 AGGATTAACCTCTAG GGGATATCCACA TTTTC TGTGGATATCTC TGTTTGAAACTAGGG Shewmr7_2948 3489899 - 3490570 + | DNA mismatch repair protein Shewmr7_2949 3490754 - 3491761 + | putative adenylate/guanylate cyclase Shewmr7_2950 3492698 - 3491787 - | LysR family transcriptional regulator TERM 4441 3492907 - 3492879 - R 93 -13.3 -2.73854 | overlap 3492876 3492881 3492883 CAGGAAATGAGACTA TAGAGGTGCAG TATCGCG CTGCACCTCTA GGCGACAAACTAGGC TERM 4442 3492905 - 3492881 - R 83 -11.5 -2.90725 | overlap 3492879 3492876 3492883 GGAAATGAGACTATA GAGGTGCAG TATCGCG CTGCACCTC TAGGCGACAAACTAG Shewmr7_2951 3493282 - 3492917 - | Hpt protein Shewmr7_2952 3494396 - 3493467 - | putative radical SAM protein Shewmr7_2953 3494635 - 3494396 - | hypothetical protein TERM 4443 3494638 - 3494627 - G 73 -3 -4.93365 | GCTCACAAGCAAAAA GAAT AACA ATTC ACTTATTTCATATTT TERM 4444 3495062 - 3495044 - g 75 -8.8 -3.89346 | opp_overlap 3495041 3495044 GCTTGATTGCACAAA TGGATGGC GAA GCCAGCCA TCGTATCGTGCGCAC TERM 4445 3496162 - 3496150 - g 100 -10.5 -4.68424 | GAAGTGATTGAAAAA GGCCG TGT CGGCC CAGGTGAGCTGTTAG gltB 3494983 - 3499431 + | glutamate synthase subunit alpha TERM 4446 3499723 - 3499741 + G 80 -13.2 -2.87463 | GAGATCTGTGGCCGC GTCTGTCC ACA GGACAGAC TATGTGAAGGGGCTT gltD 3499438 - 3500844 + | glutamate synthase subunit beta TERM 4447 3500920 - 3500939 + F 100 -9.2 -5.53288 | overlap 3500921 TTGCTTGTGAATTTT GGCGCACC TTAG GGTGCGCA TTTTTTTACCTTCCG TERM 4448 3500921 - 3500938 + F 100 -12.7 -3.90888 | overlap 3500920 TGCTTGTGAATTTTG GCGCACC TTAG GGTGCGC ATTTTTTTACCTTCC Shewmr7_2956 3501092 - 3501802 + | methylthioadenosine nucleosidase TERM 4449 3502245 - 3502235 - g 76 -3.2 -5.06451 | opp_overlap 3502242 TACCAGCGCAAAAAA GCTA TTA CAGC CGTGGATTGTCCGAG Shewmr7_2957 3501834 - 3502826 + | cobalamin biosynthesis protein CbiB Shewmr7_2958 3502882 - 3503259 + | hypothetical protein Shewmr7_2959 3503256 - 3503882 + | hypothetical protein Shewmr7_2960 3503884 - 3504375 + | hypothetical protein TERM 4450 3504692 - 3504708 + G 72 -9.5 -3.37975 | CAGCAGCCAATATGC GGGTAAA AAA TTTACCC TTGTCCGTACTCAGT Shewmr7_2961 3504498 - 3504926 + | hypothetical protein TERM 4451 3505007 - 3504978 - T 100 -15.9 -3.01857 | opp_overlap 3504978 3504983, overlap 3504984 GATAAAATGCAGATA TAAAAAGAGCGCC CTTA GGCGCTCCTTTTA TTTGCTTGGTCAGTG TERM 4452 3504978 - 3505007 + T 100 -13.7 -3.96298 | opp_overlap 3504978 3504984, overlap 3504983 GATAAAATGCAGATA TAAAAAGAGCGCC CTTA GGCGCTCCTTTTA TTTGCTTGGTCAGTG TERM 4453 3504983 - 3505002 + T 100 -9.2 -5.00851 | opp_overlap 3504978 3504984, overlap 3504978 AATGCAGATATAAAA AGAGCGCC CTTA GGCGCTCC TTTTATTTGCTTGGT TERM 4454 3505001 - 3504984 - T 100 -12.7 -5.04597 | opp_overlap 3504983 3504978, overlap 3504978 ATGCAGATATAAAAA GAGCGCC CTTA GGCGCTC CTTTTATTTGCTTGG Shewmr7_2962 3506276 - 3505080 - | tyrosyl-tRNA synthetase Shewmr7_2963 3506329 - 3507804 + | peptidase M23B TERM 4455 3508510 - 3508490 - g 70 -9.7 -3.2218 | opp_overlap 3508504 GGCAACACCGACCAA CAGCTACTG GCA CAGTTGCTG TCGCACCCTTATTTC anmK 3507824 - 3508933 + | anhydro-N-acetylmuramic acid kinase Shewmr7_2965 3511096 - 3508946 - | transcriptional regulator domain-containing protein TERM 4456 3510041 - 3510028 - G 78 -3.9 -5.08088 | opp_overlap 3510028 AATCCCGAATAAAAA TATCT TCCG AGATA TTACTAAAGCGCCTC TERM 4457 3510773 - 3510760 - G 72 -9.5 -3.39288 | opp_overlap 3510760, overlap 3510758 TAGGGGGCAATAACA GGCGG TAGC CCGCC TTTCGAACCGTTTCA TERM 4458 3510760 - 3510773 + g 74 -9.5 -3.56594 | opp_overlap 3510758 3510760 TAGGGGGCAATAACA GGCGG TAGC CCGCC TTTCGAACCGTTTCA Shewmr7_2966 3511406 - 3513811 + | glutamyl peptidase TERM 4459 3513839 - 3513825 - T 72 -10 -2.77113 | overlap 3513820 3513824 AATCTACAAACCAAT GCGCTT GGT AAGCGC TTAACATTTCACAAG TERM 4460 3513907 - 3513857 - T 100 -14.8 -3.81848 | opp_overlap 3513859, overlap 3513859 3513861 AACATTTCACAAGAA CACATCTCAGGCCATTGGCGGC ATAACGA GCCGCCAATGGCCTAACAAGTT ACTGTCATCGCCAGT TERM 4461 3513905 - 3513859 - T 100 -17.4 -3.48824 | opp_overlap 3513859, overlap 3513857 3513861 CATTTCACAAGAACA CATCTCAGGCCATTGGCGGC ATAACGA GCCGCCAATGGCCTAACAAG TTACTGTCATCGCCA TERM 4462 3513859 - 3513905 + T 100 -15.2 -3.29471 | opp_overlap 3513859 3513857 3513861 CATTTCACAAGAACA CATCTCAGGCCATTGGCGGC ATAACGA GCCGCCAATGGCCTAACAAG TTACTGTCATCGCCA TERM 4463 3513903 - 3513861 - T 100 -18.6 -3.31208 | opp_overlap 3513859, overlap 3513859 3513857 TTTCACAAGAACACA TCTCAGGCCATTGGCGGC ATAACGA GCCGCCAATGGCCTAACA AGTTACTGTCATCGC TERM 4464 3514288 - 3514265 - T 100 -11 -5.7946 | TCGGCAATAAAAAAA CCGCATGCAG GGAG CCACATGCGG TTGAGCAAACTTAAG Shewmr7_2967 3517350 - 3514327 - | TonB-dependent receptor TERM 4465 3515130 - 3515116 - G 78 -10 -3.83502 | GACCGCCAGATTAAA GCCTTC TAG GAAGGC GGGCGCCATGGTAAA TERM 4466 3516734 - 3516746 + g 70 -9.1 -3.53012 | GTGGTTTCGCGGCCA CCACC TTC GGTGG TTTCGCCGCCACGGG Shewmr7_2968 3518042 - 3518737 + | aquaporin Z TERM 4467 3518745 - 3518777 + F 95 -9.3 -4.56597 | gap 2, opp_overlap 3518753, overlap 3518750 3518753 CTAAGTAATTCCCCC GCTAGCAACAGCGCC CTCGC GGCGCTGTTG-T-GC TTTTTCAAACCCCGC TERM 4468 3518750 - 3518774 + F 100 -15.8 -3.23708 | opp_overlap 3518753, overlap 3518745 3518753 TAATTCCCCCGCTAG CAACAGCGCC CTCGC GGCGCTGTTG TGCTTTTTCAAACCC TERM 4469 3518771 - 3518753 - f 84 -11.7 -3.14132 | opp_overlap 3518753 3518750 3518745 TTCCCCCGCTAGCAA CAGCGCC CTCGC GGCGCTG TTGTGCTTTTTCAAA TERM 4470 3518753 - 3518771 + F 95 -11.7 -3.75505 | opp_overlap 3518753, overlap 3518750 3518745 TTCCCCCGCTAGCAA CAGCGCC CTCGC GGCGCTG TTGTGCTTTTTCAAA Shewmr7_2969 3518894 - 3519274 + | hypothetical protein Shewmr7_2970 3519294 - 3519749 + | hypothetical protein TERM 4471 3519783 - 3519750 - T 100 -12.5 -3.42809 | opp_overlap 3519750 3519757, overlap 3519751 3519757 AATATTATGAATTAA CGCCAAAGCAAGACG ATTA CGCCTTGCTTTGCCA GTACTTGCAACACAG TERM 4472 3519782 - 3519751 - T 95 -13.8 -2.64962 | opp_overlap 3519750 3519757, overlap 3519750 3519757 ATATTATGAATTAAC GCCAAAGCAAGACG ATTA CGCCTTGCTTTGCC AGTACTTGCAACACA TERM 4473 3519776 - 3519757 - T 80 -10 -3.69434 | opp_overlap 3519750 3519757, overlap 3519751 3519750 TGAATTAACGCCAAA GCAAGACG ATTA CGCCTTGC TTTGCCAGTACTTGC TERM 4474 3519757 - 3519776 + T 70 -7.8 -3.59315 | opp_overlap 3519757 3519751 3519750, overlap 3519750 TGAATTAACGCCAAA GCAAGACG ATTA CGCCTTGC TTTGCCAGTACTTGC TERM 4475 3519832 - 3519816 - T 100 -10.1 -5.54885 | opp_overlap 3519816 AAGACCAACAAAAAA GCCGTCA TCA CGACGGC TTTTTTTATCTTCTA TERM 4476 3519816 - 3519832 + T 100 -9.4 -5.84432 | opp_overlap 3519816 AAGACCAACAAAAAA GCCGTC ATCAC GACGGC TTTTTTTATCTTCTA Shewmr7_2971 3520231 - 3519881 - | iron-sulfur cluster insertion protein ErpA Shewmr7_2972 3521030 - 3520224 - | hypothetical protein TERM 4477 3521484 - 3521497 + G 70 -2.3 -5.0133 | opp_overlap 3521473 3521472, overlap 3521471 3521485 AAATCCCGTTGCAAT CTGCC GCGG GGCAA TTTTTTCAGGCGCTG TERM 4478 3521670 - 3521693 + G 73 -3 -4.91109 | overlap 3521674 3521676 3521678 GAATTGCCGCTACCT TTAACGCCCC GCTT GCGGCGGTGA TTTTTGTACTCGAAG TERM 4479 3521778 - 3521789 + G 78 -5.8 -4.79223 | TTTGTGGTGCAGTTT CCAG CCAG CTGG TTTTTGGTAATGTGC TERM 4480 3522496 - 3522485 - g 100 -7.2 -5.36441 | GCGCTACAGAAAAAA GGCG TGCG CGCC CTGATGGATAAACGC Shewmr7_2973 3521105 - 3522829 + | Cl- channel, voltage-gated family protein Shewmr7_2974 3523020 - 3524039 + | aspartate carbamoyltransferase TERM 4481 3524044 - 3524028 - f 75 -8.7 -3.6682 | opp_overlap 3524028 TGGTATTCACGTAAA GCCGATC GCT AATCGGC TACTTACTTTAAGGA Shewmr7_2975 3524066 - 3525358 + | glutamate-1-semialdehyde 2,1-aminomutase TERM 4482 3525402 - 3525373 - f 73 -7.1 -4.1721 | opp_overlap 3525379, overlap 3525375 3525379 AGCGATAGCTTAAAA CACTAAGGGACGC ATGA GCGTCCCTTTTTA TTGCTTGGCGTTTGC TERM 4483 3525396 - 3525379 - f 100 -12.7 -3.54181 | opp_overlap 3525379, overlap 3525375 3525373 AGCTTAAAACACTAA GGGACGC ATGA GCGTCCC TTTTTATTGCTTGGC TERM 4484 3525379 - 3525396 + F 100 -12.7 -5.1963 | opp_overlap 3525379 3525375 3525373 AGCTTAAAACACTAA GGGACGC ATGA GCGTCCC TTTTTATTGCTTGGC TERM 4485 3525731 - 3525741 + F 75 -5.4 -4.82901 | overlap 3525719 GCTCAGTCAATATTT TGAC CTG GTCA TTTTTGTGACACAGC TERM 4486 3525979 - 3525965 - f 76 -2.8 -5.3104 | TCATCAAAAACAAAA TAGTGT TTA ACGCTA AAAATAAGCCAATTT TERM 4487 3526373 - 3526389 + G 74 -4.3 -4.8048 | overlap 3526375 AAAACTTGCTCGAGA TTGCCAC CCT GTGGCTG TTTTTGATGTCGACA TERM 4488 3526375 - 3526387 + G 77 -9.1 -4.02302 | overlap 3526373 AACTTGCTCGAGATT GCCAC CCT GTGGC TGTTTTTGATGTCGA TERM 4489 3527337 - 3527322 - g 70 -9 -3.51904 | opp_overlap 3527322, overlap 3527320 GAGCAAAGTGAAAGA GCTGAC TTTC GTCAGC TACTTGAAATATGTG Shewmr7_2976 3526114 - 3527424 + | citrate transporter TERM 4490 3527453 - 3527482 + T 100 -15.9 -3.92869 | opp_overlap 3527453 3527460, overlap 3527460 ATATTACTTTACACA TAAAAAAGGCGCC CATC GGCGCCTTTTTTG TTTGTAACTGAGTAG TERM 4491 3527482 - 3527453 - T 100 -13.7 -2.9039 | opp_overlap 3527453 3527460, overlap 3527460 ATATTACTTTACACA TAAAAAAGGCGCC CATC GGCGCCTTTTTTG TTTGTAACTGAGTAG TERM 4492 3527475 - 3527460 - T 100 -11.8 -5.4251 | opp_overlap 3527460 3527453, overlap 3527453 TTTACACATAAAAAA GGCGCC CATC GGCGCC TTTTTTGTTTGTAAC TERM 4493 3527460 - 3527475 + T 100 -11.8 -5.72622 | opp_overlap 3527453 3527460, overlap 3527453 TTTACACATAAAAAA GGCGCC CATC GGCGCC TTTTTTGTTTGTAAC Shewmr7_2977 3528614 - 3527499 - | general secretion pathway protein B Shewmr7_2978 3530302 - 3528614 - | peptidoglycan binding domain-containing protein TERM 4494 3530342 - 3530328 - H 71 -5 -4.74504 | ATCCTAAGCTAAAAA TAACGC CCC ACGTTA AAACGTCCCAATGAT TERM 4495 3530885 - 3530895 + G 74 -8.2 -4.0896 | opp_overlap 3530882 CCACTGAGAGTATTA CGGG TTG CCCG TTTTGCCGCACGTTT TERM 4496 3531232 - 3531215 - g 70 -3.3 -4.85129 | gap 1, opp_overlap 3531215, overlap 3531217 ATGACAGAGGAAAAA GCCGTGCG CTT CGC-CGCC TTAGTGCACGATCTA Shewmr7_2979 3530477 - 3531727 + | metal dependent phosphohydrolase Shewmr7_2980 3531962 - 3532228 + | major outer membrane lipoprotein, putative Shewmr7_2981 3533691 - 3532852 - | rRNA (guanine-N(1)-)-methyltransferase TERM 4497 3533757 - 3533729 - R 78 -9 -3.90048 | opp_overlap 3533735, overlap 3533735 CTGCGCCTAAAAACA CAAAAATCGGGT ACAAG ACCCGATTTTTT AGCCGTGGCGCCCCT TERM 4498 3533735 - 3533751 + r 95 -8 -5.03314 | opp_overlap 3533729 3533735 CTAAAAACACAAAAA TCGGGT ACAAG ACCCGA TTTTTTAGCCGTGGC TERM 4499 3533751 - 3533735 - R 100 -8 -5.36364 | opp_overlap 3533735, overlap 3533729 CTAAAAACACAAAAA TCGGGT ACAAG ACCCGA TTTTTTAGCCGTGGC Shewmr7_2982 3534576 - 3533776 - | undecaprenyl pyrophosphate phosphatase Shewmr7_2983 3535104 - 3534595 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Shewmr7_2984 3535505 - 3535155 - | dihydroneopterin aldolase Shewmr7_2985 3535744 - 3536355 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 4500 3536453 - 3536425 - T 100 -13.3 -3.89348 | opp_overlap 3536431, overlap 3536431 AATCCCAGAGAACAA TAAAAACAGCGCA TCA TGCGCTGTTTTTT ATTTTGCTGACTTGG TERM 4501 3536431 - 3536447 + T 100 -12.3 -5.83211 | opp_overlap 3536425 3536431 AGAGAACAATAAAAA CAGCGCA TCA TGCGCTG TTTTTTATTTTGCTG TERM 4502 3536447 - 3536431 - T 100 -12.3 -5.35721 | opp_overlap 3536431, overlap 3536425 AGAGAACAATAAAAA CAGCGCA TCA TGCGCTG TTTTTTATTTTGCTG Shewmr7_2986 3537496 - 3536480 - | O-sialoglycoprotein endopeptidase TERM 4503 3537065 - 3537049 - G 75 -8.7 -3.92602 | opp_overlap 3537049 CTAAGACTTCATAAA GGCCGAT GCC ATCGACC TTTACCAGCATAGAG rpsU 3537711 - 3537926 + | 30S ribosomal protein S21 TERM 4504 3537916 - 3537902 - f 74 -7.8 -4.07568 | opp_overlap 3537902 GCTTTCTCGCGAAAA CGCACG TCG CGTACG TTTATACTAATCTCT Shewmr7_2988 3537933 - 3538376 + | GatB/Yqey domain-containing protein TERM 4505 3538397 - 3538420 + F 100 -14.6 -4.50159 | opp_overlap 3538397 3538400 GTTTCAATGTATGAA CAAGCCGTGC CTAT GCGCGGCTTG TTTGTTTAAATTCGC TERM 4506 3538420 - 3538397 - f 93 -12.4 -3.21912 | opp_overlap 3538397, overlap 3538400 GTTTCAATGTATGAA CAAGCCGTGC CTAT GCGCGGCTTG TTTGTTTAAATTCGC TERM 4507 3538417 - 3538400 - f 75 -8.3 -3.75105 | opp_overlap 3538397, overlap 3538397 TCAATGTATGAACAA GCCGTGC CTAT GCGCGGC TTGTTTGTTTAAATT Shewmr7_2989 3538460 - 3540184 + | DNA primase TERM 4508 3541330 - 3541291 - g 71 -5.8 -4.33182 | gap 1, overlap 3541292 CGATGCAGAAAAGAA CTCAACCAAGCCTTATGCC GAA GGCTTAAGAAT-GGTTGAA GAAGACGTACAGCGT TERM 4509 3542099 - 3542063 - g 74 -9.6 -3.59247 | gap 1, overlap 3542066 GAAGAAGTGGGTAAA CAATTTGACGTGACCCG TGAA CGTATC-CGTCAAATTG AGGCGAAAGCCCTGC Shewmr7_2990 3540311 - 3542170 + | RNA polymerase, sigma 70 subunit, RpoD TERM 4510 3542192 - 3542208 + T 100 -15.1 -5.15167 | opp_overlap 3542180 CAAGCTTAATCCCAA GCCCCGC CTA GCGGGGC TTTTTATTAGTGCTC TERM 4511 3542565 - 3542548 - T 100 -9.9 -5.5074 | opp_overlap 3542548 CAATTCAACAAAAAA GCCCATT TAAA AATGGGC TTTTTTGTATCTGCA TERM 4512 3542548 - 3542565 + T 100 -9.9 -5.4251 | opp_overlap 3542548 CAATTCAACAAAAAA GCCCATT TAAA AATGGGC TTTTTTGTATCTGCA TERM 4513 3542700 - 3542666 - T 89 -6.4 -5.39755 | opp_overlap 3542670 3542690, overlap 3542670 CAGAACCAGAAAAAA TAAAGGCACTAAGCGG GAT CCACTTAGCACCTTGT TATCACTTATATCTG TERM 4514 3542696 - 3542670 - T 100 -11.6 -5.1471 | opp_overlap 3542670 3542690, overlap 3542666 ACCAGAAAAAATAAA GGCACTAAGCGG GAT CCACTTAGCACC TTGTTATCACTTATA Shewmr7_2991 3544871 - 3542751 - | methyl-accepting chemotaxis sensory transducer Shewmr7_2992 3545291 - 3546841 + | amino acid/peptide transporter TERM 4515 3546904 - 3546879 - f 100 -14.1 -4.87665 | gap 1, opp_overlap 3546879 TGTGAGCGATAAAAA CTGCCGACAAGC CCC GCTTG-CGGCAG TTTTTTTATATCTAT TERM 4516 3546879 - 3546904 + F 100 -14.1 -5.77988 | gap 1, opp_overlap 3546879 TGTGAGCGATAAAAA CTGCCGACAAGC CCC GCTTG-CGGCAG TTTTTTTATATCTAT Shewmr7_2993 3547212 - 3548255 + | luciferase family protein TERM 4517 3548265 - 3548319 + T 100 -13.9 -4.07885 | gap 1, opp_overlap 3548285, overlap 3548274 3548285 AGCTAAGCAGAAGCG TTTTACCACGCCATAAAAAATCCCGC CTAA GCGGGATTTTTTATGGC-TGTTAACC TTTTAACACAGCATC TERM 4518 3548274 - 3548311 + T 100 -24.5 -3.15366 | opp_overlap 3548285, overlap 3548265 3548285 GAAGCGTTTTACCAC GCCATAAAAAATCCCGC CTAA GCGGGATTTTTTATGGC TGTTAACCTTTTAAC TERM 4519 3548300 - 3548285 - T 100 -10.4 -5.26316 | opp_overlap 3548274 3548265 3548285 CCACGCCATAAAAAA TCCCGC CTAA GCGGGA TTTTTTATGGCTGTT TERM 4520 3548285 - 3548300 + T 100 -10.4 -5.30686 | opp_overlap 3548285, overlap 3548274 3548265 CCACGCCATAAAAAA TCCCGC CTAA GCGGGA TTTTTTATGGCTGTT Shewmr7_2994 3549591 - 3548314 - | 4-aminobutyrate aminotransferase Shewmr7_2995 3551142 - 3549694 - | succinate semialdehyde dehydrogenase Shewmr7_2996 3552485 - 3551199 - | FAD dependent oxidoreductase TERM 4521 3552682 - 3552708 + r 100 -17.4 -4.08767 | opp_overlap 3552682 GGAGGGCAGAGAGAA GGATGGCCTTGG CGA TCAAGGCCATCC TTTTAGCGAGATAAA TERM 4522 3552708 - 3552682 - R 100 -16.7 -3.59698 | opp_overlap 3552682 GGAGGGCAGAGAGAA GGATGGCCTTG GCGAT CAAGGCCATCC TTTTAGCGAGATAAA Shewmr7_2997 3553581 - 3552766 - | binding-protein-dependent transport systems inner membrane component Shewmr7_2998 3554483 - 3553578 - | binding-protein-dependent transport systems inner membrane component Shewmr7_2999 3555616 - 3554480 - | spermidine/putrescine ABC transporter ATPase subunit TERM 4523 3555745 - 3555771 + r 76 -10.8 -2.6563 | opp_overlap 3555748, overlap 3555742 3555742 ATGTCTGTGCTATTA AAAGGGGCAAGC AAT GCTTGCCCCATC TCGATTATTGGCCAG TERM 4524 3555768 - 3555748 - R 100 -16.9 -4.25104 | opp_overlap 3555745 3555742 3555742 TCTGTGCTATTAAAA GGGGCAAGC AAT GCTTGCCCC ATCTCGATTATTGGC TERM 4525 3555799 - 3555825 + r 71 -4.5 -4.72272 | gap 1 CAGACTTCACTTTGG TCCAGACGCG GGTTAATA CGCGT-TGGA TTTTTAATGGACGGA Shewmr7_3000 3556939 - 3555776 - | extracellular solute-binding protein TERM 4526 3557502 - 3557484 - R 71 -3.1 -5.08088 | overlap 3557486 3557493 AATTTTGAACAAAAA CAGTGCA AATTA CACACTG AGTAACAGGAACTCC Shewmr7_3001 3558848 - 3557493 - | L-glutamine synthetase TERM 4527 3558020 - 3558039 + g 82 -7.2 -4.61231 | ATGGGCTTTGAGTAC CGTCTTCA TTAG TGAAGATG TTTTTGCCCGTCTCC TERM 4528 3558457 - 3558467 + g 82 -6.8 -4.79223 | opp_overlap 3558455 3558456, overlap 3558455 3558454 TCAGGTGCAATAACT GGCT CCC AGCC TTTTTGCTCGTATAG Shewmr7_3002 3559611 - 3558850 - | peptidase C26 TERM 4529 3559561 - 3559549 - G 71 -7.7 -4.01737 | opp_overlap 3559548 ACCAACAATATTAAA GGGAT GCG ATCCC AATTGTTGATTACAC Shewmr7_3003 3560630 - 3560004 - | XRE family transcriptional regulator Shewmr7_3004 3560787 - 3562094 + | FAD dependent oxidoreductase Shewmr7_3005 3562651 - 3562139 - | hypothetical protein Shewmr7_3006 3563593 - 3562736 - | 3-mercaptopyruvate sulfurtransferase TERM 4530 3563049 - 3563036 - G 71 -5.2 -4.57073 | opp_overlap 3563040, overlap 3563037 CACTTGGCCTAAAAA GCGG GCGGCG CCGC GGGCATCGATAATCG Shewmr7_3007 3564182 - 3563739 - | rare lipoprotein A TERM 4531 3564275 - 3564249 - R 78 -5.1 -4.97405 | gap 1 ACCCAGAAAAATAAA GCCCCTT-TCGC ATCG GCGTTAAGAGGC TTGAGAGGGAGTAAA TERM 4532 3564315 - 3564292 - R 75 -7.5 -4.29738 | opp_overlap 3564309 TGAGAGGGAGTAAAA CGACTTAGA GGGCTA TCCAAGTCG CCTTGATTTCGGTGT Shewmr7_3008 3565792 - 3564296 - | aldehyde dehydrogenase (acceptor) TERM 4533 3565037 - 3565047 + g 76 -3.2 -5.06414 | CGCATAAATCATTAA TTGC TTA GCGA TTTTTGTTGAACCCG Shewmr7_3009 3566073 - 3567413 + | beta alanine--pyruvate transaminase Shewmr7_3010 3567465 - 3568955 + | methylmalonate-semialdehyde dehydrogenase [acylating] TERM 4534 3569243 - 3569253 + G 76 -6.8 -4.48713 | CACAAACCTTCAGTG TCGG CGA CCGA TTTATTATTCCTGCG Shewmr7_3011 3568972 - 3569337 + | protein of unknown function DUF861, cupin_3 TERM 4535 3569686 - 3569669 - g 70 -9.1 -3.55444 | overlap 3569670 GTGGCATCTCGCAAA CCGCAGG CGAT CCTGCGA TTCAAGGTGGTGTCG Shewmr7_3012 3569524 - 3570246 + | hypothetical protein TERM 4536 3570270 - 3570287 + T 79 -6.9 -4.66609 | opp_overlap 3570271, overlap 3570271 CTGCAAATAGCAAAA AGCCCTC TGTT GAGGGCC TTTTTACATCGCCTG TERM 4537 3570271 - 3570286 + T 78 -10.4 -3.39483 | opp_overlap 3570271, overlap 3570270 TGCAAATAGCAAAAA GCCCTC TGTT GAGGGC CTTTTTACATCGCCT TERM 4538 3570286 - 3570271 - T 100 -10.4 -4.93696 | opp_overlap 3570271 3570270 TGCAAATAGCAAAAA GCCCTC TGTT GAGGGC CTTTTTACATCGCCT Shewmr7_3013 3571609 - 3570311 - | glucose/galactose transporter TERM 4539 3571154 - 3571139 - G 70 -8.2 -3.79162 | TGCAGAGAAAACTAA GGGGGC AATC ACCCCC GCACCTTTATTCAAA TERM 4540 3571312 - 3571292 - G 70 -2.5 -4.96848 | overlap 3571294 TTGCGCACATAAAAA CAGACCAAA TAT TTGGGTCTT AGCCGCAGGAATAAA TERM 4541 3571784 - 3571773 - R 78 -4.4 -5.23765 | opp_overlap 3571773 CAAACAACACAAAAA GACA ACGC TGTC ATTTGCGATTTTGCC TERM 4542 3571903 - 3571924 + r 80 -10.2 -3.54129 | opp_overlap 3571903 GCTAGAAATAAAAAA GCCACAGA GGTGAG TCTGTGGC TTTGAGAAAAATCTG TERM 4543 3571924 - 3571903 - R 100 -10.2 -5.72622 | opp_overlap 3571903 GCTAGAAATAAAAAA GCCACAGA GGTGAG TCTGTGGC TTTGAGAAAAATCTG Shewmr7_3014 3573136 - 3571949 - | hypothetical protein TERM 4544 3573247 - 3573212 - R 100 -10.6 -5.88565 | gap 1 TGTACAATAAAAAAA CTTAGCCCCTGTCATCA AAA TAA-GACAAGGGCCAAG GTTAACGCTTTACTG Shewmr7_3015 3574411 - 3573275 - | N-acetylglucosamine 6-phosphate deacetylase TERM 4545 3574282 - 3574263 - G 100 -13.6 -4.45083 | TGCACATCGATAAAA CCTGGCAC TAGG GTGCCAGG GTAGCGAATTTCCTT Shewmr7_3016 3575453 - 3574455 - | glutamine--fructose-6-phosphate transaminase (isomerizing) Shewmr7_3017 3576420 - 3575512 - | ATPase, BadF/BadG/BcrA/BcrD type TERM 4546 3576532 - 3576519 - R 75 -5.3 -4.80882 | opp_overlap 3576519 ATGTTACAGCAAAAA TGACA GCGT TGTCA TTTACTTTTTGAAGC TERM 4547 3576628 - 3576601 - R 100 -11.5 -5.63236 | overlap 3576626 AGTGAAAAAGAAAAA GGCTGTATTTT TATTTT AAAATACAGCC AGATATAGCTTTTTA Shewmr7_3018 3579334 - 3576644 - | Beta-N-acetylhexosaminidase TERM 4548 3578900 - 3578912 + g 73 -3.3 -4.91459 | CCACAACTCACCGCG GAACC TTA GGGTC TTTTTCTCGCTCTTG Shewmr7_3019 3580850 - 3579363 - | methyl-accepting chemotaxis sensory transducer TERM 4549 3580294 - 3580312 + g 71 -6 -4.30719 | opp_overlap 3580294 AATCTGTGGCTTAAA TCGCCA TCACCAT TGGCGA TTTCTTCTAACGCGG Shewmr7_3020 3581836 - 3580850 - | type IV pilus assembly protein PilM TERM 4550 3581826 - 3581793 - G 71 -6.9 -4.27192 | gap 1, overlap 3581782 3581781 3581794 3581796 AAACGCTTAGCAAAA GTAGTTACTACACTGC CAA GCAGTGTAGCAA-TAT GAATAACCATGAATC TERM 4551 3581825 - 3581794 - G 71 -10.4 -3.15592 | gap 1, overlap 3581782 3581781 3581793 3581796 AACGCTTAGCAAAAG TAGTTACTACACTGC CAA GCAGTGTAGCAA-TA TGAATAACCATGAAT TERM 4552 3581824 - 3581796 - G 74 -11.1 -3.13504 | overlap 3581782 3581781 3581794 3581793 CGCTTAGCAAAAGTA GTTACTACACTGC CAA GCAGTGTAGCAAT ATGAATAACCATGAA TERM 4553 3581970 - 3581941 - H 100 -18.7 -5.47218 | opp_overlap 3581937 3581964, overlap 3581963 CTCTACCTAAAAAAA TGGCTGGGCACTG CTTA CAGTACCCAGCCA ACGCTAGTTTCTGGG Shewmr7_3021 3582327 - 3583235 + | hypothetical protein Shewmr7_3022 3583943 - 3583254 - | SapC family protein Shewmr7_3023 3585503 - 3583980 - | tryptophan halogenase TERM 4554 3585563 - 3585580 + r 100 -11.3 -4.19817 | opp_overlap 3585563 TTTTGATAATAAAAA GCCTAGC GATT GCTAGGC TTTTGGGTCACTGAA TERM 4555 3585580 - 3585563 - R 100 -11.3 -5.18726 | opp_overlap 3585563 TTTTGATAATAAAAA GCCTAGC GATT GCTAGGC TTTTGGGTCACTGAA Shewmr7_3024 3588225 - 3585601 - | TonB-dependent receptor Shewmr7_3025 3588652 - 3589668 + | LacI family transcription regulator TERM 4556 3589686 - 3589728 + T 100 -20.3 -3.2048 | gap 1, opp_overlap 3589670 3589669 3589692 3589697, overlap 3589692 3589697 TTCAGCCCTGCAAGG CTG-AAACAAAACAGAGAGC CAAG GCTCTCTGTTTTGTTTTCAG TTAATGCAATTTCAG TERM 4557 3589721 - 3589692 - T 100 -18.1 -3.60792 | opp_overlap 3589692 3589686 3589697, overlap 3589697 CCTGCAAGGCTGAAA CAAAACAGAGAGC CAAG GCTCTCTGTTTTG TTTTCAGTTAATGCA TERM 4558 3589692 - 3589721 + T 100 -18.1 -4.30014 | opp_overlap 3589692 3589697, overlap 3589686 3589697 CCTGCAAGGCTGAAA CAAAACAGAGAGC CAAG GCTCTCTGTTTTG TTTTCAGTTAATGCA TERM 4559 3589716 - 3589697 - T 100 -12.2 -4.88405 | opp_overlap 3589692 3589686 3589697, overlap 3589692 AAGGCTGAAACAAAA CAGAGAGC CAAG GCTCTCTG TTTTGTTTTCAGTTA TERM 4560 3589697 - 3589716 + T 100 -12.2 -5.13343 | opp_overlap 3589697 3589692, overlap 3589692 3589686 AAGGCTGAAACAAAA CAGAGAGC CAAG GCTCTCTG TTTTGTTTTCAGTTA Shewmr7_3026 3591018 - 3589729 - | NADH dehydrogenase TERM 4561 3591199 - 3591172 - R 77 -10.6 -3.17982 | opp_overlap 3591179, overlap 3591162 3591179 ATAAATTTTTAGCAA CAAAAAAGGGCC AAAT GGCCCTATCTTG AAATGGATGAATCAC TERM 4562 3591179 - 3591192 + r 72 -9.5 -3.08992 | opp_overlap 3591172 3591179 TTTAGCAACAAAAAA GGGCC AAAT GGCCC TATCTTGAAATGGAT TERM 4563 3591192 - 3591179 - R 100 -9.5 -5.5112 | opp_overlap 3591179, overlap 3591172 TTTAGCAACAAAAAA GGGCC AAAT GGCCC TATCTTGAAATGGAT Shewmr7_3027 3591549 - 3591211 - | nitrogen regulatory protein P-II Shewmr7_3028 3591787 - 3592299 + | methylation site containing protein Shewmr7_3029 3592454 - 3592921 + | methylation site containing protein Shewmr7_3030 3593249 - 3592947 - | hypothetical protein TERM 4564 3593136 - 3593126 - G 80 -3.2 -5.37345 | overlap 3593127 3593130 TCCAACGATAAAAAA GGAC TTT ATCC CCTTTAGATAAATTC Shewmr7_3031 3593647 - 3593246 - | methylation site containing protein Shewmr7_3032 3597306 - 3593656 - | type IV pilin biogenesis protein, putative TERM 4565 3594060 - 3594074 + g 80 -4.3 -5.09426 | AATACCAACCACGTT TTGCA CTAAA TGCAA TTTTTTCAGATTCAG TERM 4566 3595770 - 3595793 + g 74 -4.6 -4.87052 | gap 1, opp_overlap 3595762 TACTGAATGCCACCC CAGGTGCAG AAAATCG CTGC-CCTG TTTTATTAATTTCTG TERM 4567 3597081 - 3597063 - G 70 -4.6 -4.67048 | overlap 3597066 CCACCGTAAAATAAA TCATATCA TCT TGATAAGA GTTAGCACTGTCTAA Shewmr7_3033 3597773 - 3597303 - | type IV pilus assembly protein PilX Shewmr7_3034 3598786 - 3597785 - | prepilin-type cleavage/methylation-like protein Shewmr7_3035 3599347 - 3598787 - | type IV pilus modification protein PilV TERM 4568 3599425 - 3599405 - R 70 -2.7 -4.91511 | overlap 3599407 ATCTTACGATAAAAA CATTACTAA CAG TTAATAATA GATGAGTAAAATGTA TERM 4569 3599513 - 3599539 + r 93 -12.4 -3.19425 | opp_overlap 3599519, overlap 3599519 GTGAATTTTGATAAT AAAAAAGAGGCC ATT GGCCTCTTTTTA TTCATCACATTGATT TERM 4570 3599519 - 3599533 + r 100 -11.4 -5.1356 | opp_overlap 3599519, overlap 3599513 TTTGATAATAAAAAA GAGGCC ATT GGCCTC TTTTTATTCATCACA TERM 4571 3599533 - 3599519 - R 100 -11.4 -5.55769 | opp_overlap 3599519 3599513 TTTGATAATAAAAAA GAGGCC ATT GGCCTC TTTTTATTCATCACA Shewmr7_3036 3600519 - 3599563 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Shewmr7_3037 3600943 - 3600521 - | peptidylprolyl isomerase, FKBP-type Shewmr7_3038 3601455 - 3600943 - | signal peptidase II TERM 4572 3601040 - 3601026 - G 76 -5.6 -4.82901 | opp_overlap 3601026 CTGCGCCGATAAAAA TCGCGG AAT CGGCGA TATTAAAGGCGGGAT TERM 4573 3601339 - 3601325 - G 89 -2.1 -5.72207 | GTGAAATTAAAAAAA GGTAA TAACT TCACC GATTCGAACAAATCA Shewmr7_3039 3604287 - 3601465 - | isoleucyl-tRNA synthetase Shewmr7_3040 3605255 - 3604320 - | FMN adenylyltransferase / riboflavin kinase TERM 4574 3604704 - 3604724 + g 78 -13.3 -2.58812 | opp_overlap 3604695, overlap 3604702 3604695 3604709 GGTAAAGGGATGACC GAGTAGGCG TCT CGCCTGCTC TAGGTTCCCTTTAGC Shewmr7_3041 3606880 - 3605321 - | integral membrane protein MviN TERM 4575 3607197 - 3607180 - g 74 -7.7 -4.19238 | overlap 3607160 GCTTCAATCTGAAAA GCGTCGT CAGC ACAACGC CAGCCGTCGCTCAAT TERM 4576 3607292 - 3607269 - g 76 -6.8 -4.46212 | gap 1 CTGGCGATCACAAAA CAGCAACCGAA GCT TTCG-CTGCTG CACAACCAATCGTTG rpsT 3607133 - 3607399 + | 30S ribosomal protein S20 TERM 4577 3607445 - 3607413 - T 90 -11.6 -3.73072 | gap 1, opp_overlap 3607414 3607422, overlap 3607422 AATTTTCTTAGTAAA TA-AAAAAAACCGGC AATT GCCGGTTTTTTTATA TCTAATGATTACCAT TERM 4578 3607414 - 3607443 + T 93 -12.3 -2.98015 | opp_overlap 3607413 3607422, overlap 3607422 ATTTTCTTAGTAAAT AAAAAAAACCGGC AATT GCCGGTTTTTTTA TATCTAATGATTACC TERM 4579 3607422 - 3607435 + T 100 -9.5 -5.76633 | opp_overlap 3607422 3607413, overlap 3607414 AGTAAATAAAAAAAA CCGGC AATT GCCGG TTTTTTTATATCTAA TERM 4580 3607435 - 3607422 - T 100 -9.5 -6.25578 | opp_overlap 3607414 3607422, overlap 3607413 AGTAAATAAAAAAAA CCGGC AATT GCCGG TTTTTTTATATCTAA Shewmr7_3043 3607756 - 3607460 - | ArsR family transcriptional regulator TERM 4581 3608832 - 3608852 + G 73 -11.9 -2.62396 | opp_overlap 3608831 3608830 ATCTTCCTCAAAAGC CCGCTCGTA CGA TACGAGTGG TACTCTACGCAGCTG Shewmr7_3044 3607892 - 3609298 + | peptidase M28 TERM 4582 3609359 - 3609318 - T 100 -14.7 -3.34905 | opp_overlap 3609324 3609330, overlap 3609330 TACAAGTAAATAAAT CGTATATAAAAAGAGCAGC CTAA GCTGCTCTTTTTATTTAAG CCGTAATACGTTACT TERM 4583 3609324 - 3609353 + T 100 -16.7 -3.56092 | opp_overlap 3609318 3609330, overlap 3609330 TAAATAAATCGTATA TAAAAAGAGCAGC CTAA GCTGCTCTTTTTA TTTAAGCCGTAATAC TERM 4584 3609347 - 3609330 - T 100 -11.3 -4.98522 | opp_overlap 3609324 3609330, overlap 3609318 AATCGTATATAAAAA GAGCAGC CTAA GCTGCTC TTTTTATTTAAGCCG TERM 4585 3609330 - 3609347 + T 100 -11.3 -5.27335 | opp_overlap 3609330 3609318, overlap 3609324 AATCGTATATAAAAA GAGCAGC CTAA GCTGCTC TTTTTATTTAAGCCG Shewmr7_3045 3610143 - 3609370 - | hypothetical protein TERM 4586 3610200 - 3610218 + r 75 -6 -4.63527 | opp_overlap 3610200 ACAAGCATAAAAAAA CCACGT ACAGATG ACGTGG TTTTTCCGATAGTGC TERM 4587 3610218 - 3610200 - R 95 -6 -5.73339 | opp_overlap 3610200 ACAAGCATAAAAAAA CCACGT ACAGATG ACGTGG TTTTTCCGATAGTGC Shewmr7_3046 3611718 - 3610252 - | amino acid carrier protein TERM 4588 3614166 - 3614154 - g 80 -3.4 -5.34381 | AAATTTAAAGAAAAA CCAT GGATG ATGG ATGAAATATTTACCC Shewmr7_3047 3612150 - 3614516 + | putative phosphoketolase TERM 4589 3614574 - 3614547 - f 71 -4 -4.9072 | opp_overlap 3614551, overlap 3614548 3614551 ACAAATAAAAAACAA TTTAGGGCATCC TTCG GGATGCCCTTTT AACATCAATCAAAAA TERM 4590 3614551 - 3614570 + F 100 -13.6 -4.14739 | opp_overlap 3614551 3614548 3614547 ATAAAAAACAATTTA GGGCATCC TTCG GGATGCCC TTTTAACATCAATCA TERM 4591 3614570 - 3614551 - f 93 -13.6 -2.84096 | opp_overlap 3614551, overlap 3614548 3614547 ATAAAAAACAATTTA GGGCATCC TTCG GGATGCCC TTTTAACATCAATCA TERM 4592 3614602 - 3614590 - f 70 -2.7 -4.92777 | AACATCAATCAAAAA TAACA ACA TGCTA TTCCATAAAAAACTT Shewmr7_3048 3614754 - 3615872 + | OmpA/MotB domain-containing protein TERM 4593 3615918 - 3615889 - f 89 -12.3 -2.84693 | opp_overlap 3615889 3615895, overlap 3615895 TGCACTATTAAGAAT TAAAAAGTCGCTG CTTG CAGCGACTTTTTG TTTTTATAACATCTA TERM 4594 3615889 - 3615918 + F 100 -14.5 -4.8667 | opp_overlap 3615889 3615895, overlap 3615895 TGCACTATTAAGAAT TAAAAAGTCGCTG CTTG CAGCGACTTTTTG TTTTTATAACATCTA TERM 4595 3615912 - 3615895 - f 100 -11.3 -5.00339 | opp_overlap 3615889 3615895, overlap 3615889 ATTAAGAATTAAAAA GTCGCTG CTTG CAGCGAC TTTTTGTTTTTATAA TERM 4596 3615895 - 3615912 + F 100 -11.3 -5.69262 | opp_overlap 3615895 3615889, overlap 3615889 ATTAAGAATTAAAAA GTCGCTG CTTG CAGCGAC TTTTTGTTTTTATAA Shewmr7_3049 3616121 - 3617077 + | transaldolase B pgi 3617098 - 3618735 + | glucose-6-phosphate isomerase TERM 4597 3618768 - 3618741 - f 84 -11.4 -3.09681 | opp_overlap 3618747, overlap 3618747 CAAAATCTGATCGAA CAAAAAGCCAGC AATA GCTGGCTTTTTT ATTGTATCTCTTTAA TERM 4598 3618762 - 3618747 - f 100 -10.4 -5.10461 | opp_overlap 3618747, overlap 3618741 CTGATCGAACAAAAA GCCAGC AATA GCTGGC TTTTTTATTGTATCT TERM 4599 3618747 - 3618762 + F 100 -10.4 -5.62045 | opp_overlap 3618747 3618741 CTGATCGAACAAAAA GCCAGC AATA GCTGGC TTTTTTATTGTATCT Shewmr7_3051 3618952 - 3619137 + | hypothetical protein TERM 4600 3619163 - 3619191 + T 100 -14.7 -4.62336 | opp_overlap 3619165 3619171, overlap 3619165 3619171 GATAAACAGCATATA AAGAAAAAGCGCC AAT GGCGCTTTTTCTG TTTTTGCCGTCCGCT TERM 4601 3619189 - 3619165 - T 100 -17.3 -4.15197 | opp_overlap 3619163 3619165 3619171, overlap 3619171 TAAACAGCATATAAA GAAAAAGCGCC AAT GGCGCTTTTTC TGTTTTTGCCGTCCG TERM 4602 3619165 - 3619189 + T 100 -17.3 -3.92746 | opp_overlap 3619165 3619171, overlap 3619163 3619171 TAAACAGCATATAAA GAAAAAGCGCC AAT GGCGCTTTTTC TGTTTTTGCCGTCCG TERM 4603 3619171 - 3619183 + T 100 -10.5 -5.36364 | opp_overlap 3619171 3619165, overlap 3619165 3619163 GCATATAAAGAAAAA GCGCC AAT GGCGC TTTTTCTGTTTTTGC TERM 4604 3619183 - 3619171 - T 100 -10.5 -5.42975 | opp_overlap 3619165 3619163 3619171, overlap 3619165 GCATATAAAGAAAAA GCGCC AAT GGCGC TTTTTCTGTTTTTGC Shewmr7_3052 3619741 - 3619205 - | hemerythrin HHE cation binding domain-containing protein Shewmr7_3053 3620688 - 3619963 - | hypothetical protein Shewmr7_3054 3621283 - 3620681 - | ECF subfamily RNA polymerase sigma-24 factor Shewmr7_3055 3623205 - 3621328 - | von Willebrand factor, type A TERM 4605 3622409 - 3622421 + g 71 -7.7 -4.0896 | TCCTGAGCACCCAGT TGCTG AGT CAGCA TTTTCAAGGCAGTTT TERM 4606 3623044 - 3623055 + g 81 -5.8 -4.93877 | AAGCTCAGCCTGTTG CTCG GCGG CGAG TTTTGTTTGATCGGC Shewmr7_3056 3623419 - 3625191 + | putative sulfate transporter YchM Shewmr7_3057 3625450 - 3625941 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Shewmr7_3058 3625941 - 3627038 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 4607 3627052 - 3627090 + F 100 -13.5 -4.08058 | gap 1, opp_overlap 3627052 3627055 3627062 AATTGAGCGCACAGA TCA-CTGATAAGAGTACA TATT TGTGCTCTTATCAGCTGA TTTCTCATCTTGGTT TERM 4608 3627090 - 3627052 - f 81 -11.3 -2.9006 | gap 1, opp_overlap 3627052, overlap 3627055 3627062 AATTGAGCGCACAGA TCA-CTGATAAGAGTACA TATT TGTGCTCTTATCAGCTGA TTTCTCATCTTGGTT TERM 4609 3627086 - 3627055 - f 91 -13.2 -2.69799 | opp_overlap 3627052, overlap 3627052 3627062 TGAGCGCACAGATCA CTGATAAGAGTACA TATT TGTGCTCTTATCAG CTGATTTCTCATCTT Shewmr7_3059 3627192 - 3628454 + | diguanylate cyclase with GAF sensor Shewmr7_3060 3629141 - 3628524 - | hypothetical protein TERM 4610 3629221 - 3629247 + r 81 -10.9 -3.32963 | opp_overlap 3629206, overlap 3629223 GCGCCAATCCTGTTT TTGGCGCTAAG ATCAC CTTAGCGCCTA TTATCAGGTCAAACT TERM 4611 3629223 - 3629245 + r 100 -13.5 -3.23393 | opp_overlap 3629206, overlap 3629221 GCCAATCCTGTTTTT GGCGCTAAG ATCAC CTTAGCGCC TATTATCAGGTCAAA Shewmr7_3061 3629759 - 3629298 - | hypothetical protein TERM 4612 3629444 - 3629458 + g 74 -7.2 -4.2349 | GCTGATGTCCTTCAA CCTTTA ACT TAAAGG TTTTGGGTGTGCGCG Shewmr7_3062 3631408 - 3629759 - | glutamate-cysteine ligase TERM 4613 3630928 - 3630942 + g 71 -5.7 -4.4261 | AACGGTAGGTTAAGC CCTTG CGATA CAAGG TTTTCATCTTGCCCG TERM 4614 3631512 - 3631476 - R 100 -12.4 -4.36914 | gap 1, opp_overlap 3631473 3631480, overlap 3631477 3631480 TCTTCTGCGATAAAA CGC-AGACGGTGACAGC TAAT GCTGTCACCGTCTTACT CGTTAATACTTTAGA TERM 4615 3631511 - 3631477 - R 100 -15.9 -3.21934 | gap 1, opp_overlap 3631473 3631480, overlap 3631476 3631480 CTTCTGCGATAAAAC GC-AGACGGTGACAGC TAAT GCTGTCACCGTCTTAC TCGTTAATACTTTAG TERM 4616 3631507 - 3631480 - R 100 -20 -2.80077 | opp_overlap 3631473 3631480, overlap 3631477 3631476 CTGCGATAAAACGCA GACGGTGACAGC TAAT GCTGTCACCGTC TTACTCGTTAATACT TERM 4617 3631480 - 3631507 + r 100 -20 -3.29364 | opp_overlap 3631480 3631477 3631476, overlap 3631473 CTGCGATAAAACGCA GACGGTGACAGC TAAT GCTGTCACCGTC TTACTCGTTAATACT Shewmr7_3063 3634441 - 3631592 - | peptidase M16 domain-containing protein TERM 4618 3632560 - 3632570 + g 79 -6.8 -4.66987 | opp_overlap 3632540 3632559 CGTCGTTAAACGCAG GCTG GAA CAGC TTTTCTTCCAATATG TERM 4619 3632913 - 3632899 - G 77 -12.8 -2.73364 | opp_overlap 3632904 TCGGGACTTTAAGCA CGGGCG CCG CGCCCG AGGCTGGCATTGTTG TERM 4620 3633442 - 3633452 + g 76 -5.4 -4.83169 | opp_overlap 3633441 GTACGGCATAACCAT CCTT CAC AAGG TTTTTGTAAACGAGT Shewmr7_3064 3635008 - 3634583 - | hypothetical protein Shewmr7_3065 3635296 - 3636549 + | sodium:dicarboxylate symporter TERM 4621 3636610 - 3636583 - f 84 -11.4 -3.10701 | opp_overlap 3636589, overlap 3636574 3636589 TAAAGATTTATCCAA TAAAAAGACCGC AAAT GCGGTCTTTTTT ATTATCCGTATTTCA TERM 4622 3636604 - 3636589 - f 100 -10.4 -5.10461 | opp_overlap 3636589, overlap 3636583 TTTATCCAATAAAAA GACCGC AAAT GCGGTC TTTTTTATTATCCGT TERM 4623 3636589 - 3636604 + F 100 -10.4 -5.56673 | opp_overlap 3636589 3636583 TTTATCCAATAAAAA GACCGC AAAT GCGGTC TTTTTTATTATCCGT TERM 4624 3636823 - 3636837 + G 70 -4.2 -4.59414 | opp_overlap 3636819 TCTACATCATAGCCA TCAGCG GCA CGGTGA TTTTGCTTCTTATGC Shewmr7_3066 3636708 - 3636875 + | hypothetical protein Shewmr7_3067 3638056 - 3636926 - | sodium ion-translocating decarboxylase, beta subunit TERM 4625 3637417 - 3637433 + g 73 -5.2 -4.7373 | CCAACACCATCAGCG GGAAAA TAATC TTTTCC TTTTTGCTCACCTCC Shewmr7_3068 3639900 - 3638065 - | pyruvate carboxylase subunit B Shewmr7_3069 3640169 - 3639912 - | sodium pump decarboxylases, gamma subunit TERM 4626 3640283 - 3640259 - R 100 -13.1 -3.79519 | opp_overlap 3640265, overlap 3640265 AAGTTTATTAGCAAA TGTAAATTGGT AAG ACCAATTTACA TCAGATAAGTAAGAT TERM 4627 3640727 - 3640748 + r 73 -8.7 -3.48276 | opp_overlap 3640727 3640728 3640743, overlap 3640728 TACCAAAGCAAAGAA TCCACCTTC TGAA GAAGGTGGC TTGTGTCCCACCCCC TERM 4628 3640748 - 3640727 - R 83 -8.7 -4.17002 | opp_overlap 3640727 3640728, overlap 3640728 3640743 TACCAAAGCAAAGAA TCCACCTTC TGAA GAAGGTGGC TTGTGTCCCACCCCC TERM 4629 3640728 - 3640747 + r 83 -12.2 -2.68823 | opp_overlap 3640727 3640728 3640743, overlap 3640727 ACCAAAGCAAAGAAT CCACCTTC TGAA GAAGGTGG CTTGTGTCCCACCCC TERM 4630 3640747 - 3640728 - R 86 -12.2 -3.09117 | opp_overlap 3640728 3640727, overlap 3640727 3640743 ACCAAAGCAAAGAAT CCACCTTC TGAA GAAGGTGG CTTGTGTCCCACCCC TERM 4631 3640937 - 3640956 + r 91 -12.2 -3.57144 | opp_overlap 3640937 TACTATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 4632 3640956 - 3640937 - R 91 -12.2 -3.42996 | opp_overlap 3640937 TACTATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 4633 3641189 - 3641201 + r 72 -6.3 -4.2586 | GCTGGTTTGAGTTCA CACTT CTT AAGTG TTTGTATTCGTCTAA TERM 4634 3642403 - 3642375 - R 72 -8.1 -3.85698 | TGTGTTTTTGATAAA CAGTTGCAGCCAC CTG GTATCTGCGACTG CCGTCAGCTTAGGGA TERM 4635 3642857 - 3642873 + r 85 -9.4 -4.08546 | overlap 3642839 TTGGTCTTTCGGCGA GGGGGT TTTTC ACCCCC TTTATCGTTACTCAT TERM 4636 3643655 - 3643667 + r 83 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 4637 3644235 - 3644275 + r 84 -2.7 -5.63374 | opp_overlap 3644242 3644247 3644249 3644251, overlap 3644249 GGACTCGCCTTAGAC TTGAATATTCAAGACACTT AAA AAGTGTTTTAAGAACTCAA TTTTTTTCGTATTAA TERM 4638 3646103 - 3646125 + r 70 -7.1 -3.76952 | gap 1 GATTTAATTCTTTGA TTACTC-GCC AAAC GGCAGAGTAA TTTCGATTAACTCAA TERM 4639 3646230 - 3646244 + r 73 -8.6 -3.63805 | TCAGCGGGTCAGGGC TGCGTA TTC TACGCA TTTCCCGTGTCGCGT TERM 4640 3646640 - 3646606 - R 93 -10.1 -4.30576 | GTCGGATTAGGAAAA CGGTTCAAGAATAAC GAATG GCGACTCTTGAACCG TAGTACTGACTCATG Shewmr7_3070 3647506 - 3646688 - | CDP-diacylglycerol--serine O-phosphatidyltransferase Shewmr7_3071 3647598 - 3648062 + | hypothetical protein TERM 4641 3648175 - 3648193 + T 100 -13.2 -5.67283 | opp_overlap 3648175 ATAGATATAAAAAAA CCGAAGTC TGA GACTTCGG TTTTTTATTTAGGTT TERM 4642 3648193 - 3648175 - T 100 -13.2 -5.77988 | opp_overlap 3648175 ATAGATATAAAAAAA CCGAAGTC TGA GACTTCGG TTTTTTATTTAGGTT Shewmr7_3072 3650816 - 3648243 - | ATPase Shewmr7_3073 3651722 - 3650934 - | hypothetical protein Shewmr7_3074 3652697 - 3651726 - | ribosomal large subunit pseudouridine synthase D Shewmr7_3075 3652733 - 3653581 + | putative lipoprotein TERM 4643 3653607 - 3653589 - f 75 -8.8 -3.69434 | opp_overlap 3653590, overlap 3653590 CGAACTAAGCGTAAA TGCCCCTT TAT AAGGGGCT TTTTTTTTAGCGTTG TERM 4644 3653590 - 3653606 + F 100 -12.3 -6.10489 | opp_overlap 3653589 3653590 GAACTAAGCGTAAAT GCCCCTT TAT AAGGGGC TTTTTTTTTAGCGTT TERM 4645 3653606 - 3653590 - f 89 -12.3 -2.81178 | opp_overlap 3653590, overlap 3653589 GAACTAAGCGTAAAT GCCCCTT TAT AAGGGGC TTTTTTTTTAGCGTT TERM 4646 3654159 - 3654173 + F 100 -11.4 -5.76633 | opp_overlap 3654159 GTACCAACATTTAAA CCTCGC TTA GCGAGG TTTTTTTGTATCTGC TERM 4647 3654173 - 3654159 - f 95 -11.4 -3.77831 | opp_overlap 3654159 GTACCAACATTTAAA CCTCGC TTA GCGAGG TTTTTTTGTATCTGC Shewmr7_3076 3654314 - 3655939 + | methyl-accepting chemotaxis sensory transducer TERM 4648 3655945 - 3655975 + F 75 -8.2 -3.89734 | overlap 3655947 3655949 CAGACTCTAGTTCAT TTTACTGGCACAGC CCT GCTGTGCCAGTCTC TTTGCTGATTATTCT TERM 4649 3655947 - 3655973 + F 100 -15.2 -3.52396 | overlap 3655945 3655949 GACTCTAGTTCATTT TACTGGCACAGC CCT GCTGTGCCAGTC TCTTTGCTGATTATT TERM 4650 3655949 - 3655971 + F 100 -17.8 -3.32233 | overlap 3655947 3655945 CTCTAGTTCATTTTA CTGGCACAGC CCT GCTGTGCCAG TCTCTTTGCTGATTA TERM 4651 3656023 - 3656040 + F 73 -2.7 -5.1356 | overlap 3656026 AGATGACATTCCGTC TAACAGT TTTT ACTGTGA TTTTTATTGATCCAA TERM 4652 3656614 - 3656604 - g 84 -4.6 -5.28778 | ATTAGCGAGAAAAAA GCCG AGT CAGC CGTAATCACCTCGTT TERM 4653 3656999 - 3656976 - g 90 -9.6 -4.54727 | overlap 3656979 TTGCTCAAACTAAAA CACCCAAGTG CTGT CACTTGGTTG CACGCTTGCGAGCAT Shewmr7_3077 3656115 - 3657308 + | globin TERM 4654 3657376 - 3657351 - T 100 -11.9 -4.21922 | TGACTCAAAACCAAA GCCACCTTCTC ATAA GACAAGGTGGC TGAACACTTATCACA Shewmr7_3078 3658126 - 3657401 - | pseudouridine synthase, Rsu Shewmr7_3079 3658761 - 3658141 - | transcriptional regulator TERM 4655 3658404 - 3658445 + g 86 -8.7 -4.43576 | gap 1, overlap 3658406 AACGGCTGGCTATAT CCGTCATGCCG-AGCATCGC GCT GCGATACTGCTGCATGGCCG TTTGTTCTCTATGCT TERM 4656 3658819 - 3658838 + H 73 -5.2 -4.61566 | opp_overlap 3658819 CACCTTTTAACAGAA TAAATAAA GTTT TTTATTTA TTTTATCCTTTACAA Shewmr7_3080 3658908 - 3659522 + | NADPH-dependent FMN reductase Shewmr7_3081 3659573 - 3659989 + | glyoxalase/bleomycin resistance protein/dioxygenase Shewmr7_3082 3660134 - 3660604 + | hypothetical protein TERM 4657 3660654 - 3660626 - T 100 -17.7 -4.67904 | opp_overlap 3660632, overlap 3660632 TAGCAAGCCCAAAAA CAAAAAGGCTGAA TCA TTCAGCCTTTTTG TTAAACACTAAGAAT TERM 4658 3660632 - 3660648 + T 100 -10.9 -5.06816 | opp_overlap 3660632 3660626 GCCCAAAAACAAAAA GGCTGAA TCA TTCAGCC TTTTTGTTAAACACT TERM 4659 3660648 - 3660632 - T 100 -10.9 -5.61881 | opp_overlap 3660632, overlap 3660626 GCCCAAAAACAAAAA GGCTGAA TCA TTCAGCC TTTTTGTTAAACACT Shewmr7_3083 3661244 - 3660675 - | GPR1/FUN34/yaaH family protein Shewmr7_3084 3661983 - 3662219 + | hypothetical protein TERM 4660 3662278 - 3662300 + F 100 -13.6 -5.06414 | AGCGTGTTCTGCTTA TGCCATTCAA ACC TTGAATGGCA TTTTTATTGGGGCGG Shewmr7_3085 3662573 - 3663436 + | MltA-interacting MipA family protein Shewmr7_3086 3663463 - 3663855 + | hypothetical protein Shewmr7_3087 3663855 - 3664568 + | two component transcriptional regulator TERM 4661 3665196 - 3665182 - g 70 -4.3 -4.69549 | overlap 3665194 AATCGAAAACCAAAA GCATT TATCC AATGC GGTTTCCCACGAGAT TERM 4662 3665351 - 3665341 - g 76 -6.8 -4.46617 | opp_overlap 3665347 AAAAGAAATGGAAAA CCTG CTG CAGG AACTGCTGACTTACG Shewmr7_3088 3664577 - 3665845 + | periplasmic sensor signal transduction histidine kinase Shewmr7_3089 3666182 - 3665874 - | hypothetical protein Shewmr7_3090 3666342 - 3666869 + | hypothetical protein TERM 4663 3666996 - 3666958 - T 79 -8.2 -4.19336 | overlap 3666964 AATGACTTTAATAAA CCACAATGGCTTAAACCA CAA TGATTTAAACCACGGAGG CTTATGCAATAGTCA TERM 4664 3666990 - 3666964 - T 78 -9.6 -3.68962 | overlap 3666958 TTTAATAAACCACAA TGGCTTAAACCA CAA TGATTTAAACCA CGGAGGCTTATGCAA TERM 4665 3667046 - 3667008 - T 100 -17.7 -3.08996 | opp_overlap 3667019, overlap 3667013 3667019 GAGGCTTATGCAATA GTCAATAAAAATGGGCG ATTAA CGCCCATTTTTATTGCC AAAGGAAGGTCAAAA TERM 4666 3667041 - 3667013 - T 100 -14.8 -3.19522 | opp_overlap 3667019, overlap 3667008 3667019 TTATGCAATAGTCAA TAAAAATGGGCG ATTAA CGCCCATTTTTA TTGCCAAAGGAAGGT TERM 4667 3667035 - 3667019 - T 100 -9.4 -5.12971 | opp_overlap 3667019, overlap 3667013 3667008 AATAGTCAATAAAAA TGGGCG ATTAA CGCCCA TTTTTATTGCCAAAG TERM 4668 3667019 - 3667035 + T 100 -9.4 -5.06414 | opp_overlap 3667019 3667013 3667008 AATAGTCAATAAAAA TGGGCG ATTAA CGCCCA TTTTTATTGCCAAAG cysM 3667964 - 3667086 - | cysteine synthase B TERM 4669 3668705 - 3668717 + G 73 -6.3 -4.58283 | opp_overlap 3668704 TAAAGATAATCAAGC CTCAT TAG ATGAG TTTTTGAAGAAGTTC TERM 4670 3668762 - 3668783 + G 74 -7.3 -4.16842 | gap 1, overlap 3668766 CGTATTTGATACGGG CGGCCGTGGT GCA ACCAC-GTCG TTTGTTGAACGTGGC Shewmr7_3092 3668172 - 3669179 + | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 4671 3669211 - 3669238 + F 81 -11.3 -2.88822 | opp_overlap 3669209 3669216, overlap 3669216 CTAAATCACCAAATC CACAACCCGGG CAATGT CCCGGGTTTTG TGGTTATATCGCGGC TERM 4672 3669216 - 3669233 + F 100 -9.8 -4.60073 | opp_overlap 3669216 3669209, overlap 3669211 TCACCAAATCCACAA CCCGGG CAATGT CCCGGG TTTTGTGGTTATATC TERM 4673 3669233 - 3669216 - f 78 -9.8 -3.48807 | opp_overlap 3669211 3669216, overlap 3669209 TCACCAAATCCACAA CCCGGG CAATGT CCCGGG TTTTGTGGTTATATC Shewmr7_3093 3669363 - 3670208 + | sulfate ABC transporter, inner membrane subunit CysT TERM 4674 3670833 - 3670859 + G 80 -10.8 -3.76492 | opp_overlap 3670841 ATTTATGGGGTGATC CTCACCAACGCC AGA GCCGTAGGTGAG TTTGGTGCCGTTGCC Shewmr7_3094 3670218 - 3671087 + | sulfate ABC transporter, inner membrane subunit CysW Shewmr7_3095 3671084 - 3672214 + | sulfate ABC transporter, ATPase subunit TERM 4675 3672252 - 3672273 + T 100 -14.5 -5.49234 | opp_overlap 3672252 GCATATAACAAAAAA GCGCTGACA GTCT TGTCAGCGC TTTTTTATTCGCTCT TERM 4676 3672273 - 3672252 - T 100 -14.5 -5.60689 | opp_overlap 3672252 GCATATAACAAAAAA GCGCTGACA GTCT TGTCAGCGC TTTTTTATTCGCTCT Shewmr7_3096 3673483 - 3672338 - | secretion protein HlyD family protein TERM 4677 3673146 - 3673162 + g 73 -9.4 -3.78026 | overlap 3673144 3673148 GGCACTTCCTGCTCC GCCGCT AACAG AGCGGC TCTTTTGCGTTTAAC Shewmr7_3097 3673901 - 3673485 - | hypothetical protein TERM 4678 3673558 - 3673590 + g 71 -7 -4.12532 | opp_overlap 3673556, overlap 3673553 TGATGGTTTACAACC GCTGGAGCGGCT GTCGATTCG AGTCGCTCAAGC TTTGTCTGTAAGGCC TERM 4679 3673884 - 3673874 - G 100 -6.8 -5.49579 | TGACAAAAAATAAAA TGCC TAA GGCA AAATAGTCCAAAAAC Shewmr7_3098 3675540 - 3674617 - | IS4 family transposase TERM 4680 3675747 - 3675721 - R 71 -8.8 -3.322 | opp_overlap 3675721 ATCTTCAGATATTAA GGAAAGATCGTA TCT TCCAATCTTTCC TTCTCGTTTCGACCA Shewmr7_3099 3676477 - 3675977 - | hypothetical protein TERM 4681 3676300 - 3676286 - G 86 -5.6 -5.28176 | overlap 3676288 TTTATCCATAAAAAA TACCCG CAC CGGGAA TTGGGATGAAAAACT TERM 4682 3676298 - 3676288 - G 76 -8.2 -4.2748 | overlap 3676286 TATCCATAAAAAATA CCCG CAC CGGG AATTGGGATGAAAAA Shewmr7_3100 3678181 - 3676694 - | ATPase central domain-containing protein TERM 4683 3678398 - 3678387 - H 71 -2.2 -5.09762 | ATCCCAATATAAAAA GGTA CCCA CACC ATGATAGGAACTCCC purT 3678399 - 3679574 + | phosphoribosylglycinamide formyltransferase 2 TERM 4684 3679617 - 3679592 - f 75 -10.5 -2.73542 | TTGAATGCTTAACGA CTTGTCGCCAA TACC TTGGCGACAAT CACTGCGCCCAGCCC TERM 4685 3679649 - 3679617 - f 76 -9.9 -3.29263 | gap 1, opp_overlap 3679621 3679622, overlap 3679620 ATACCTTGGCGACAA TCACTGCGCCCAGC CCTGTT GCTGGGCGC-GTTA TTAAGTCTCTAAAAC TERM 4686 3679646 - 3679620 - f 81 -11.6 -2.82623 | gap 1, opp_overlap 3679621 3679622, overlap 3679617 CCTTGGCGACAATCA CTGCGCCCAGC CCTGTT GCTGGGCGC-G TTATTAAGTCTCTAA TERM 4687 3679621 - 3679646 + F 100 -14 -3.72231 | opp_overlap 3679620 3679617, overlap 3679622 CTTGGCGACAATCAC TGCGCCCAGC CCTGTT GCTGGGCGCG TTATTAAGTCTCTAA TERM 4688 3679622 - 3679645 + F 100 -15.3 -2.82856 | opp_overlap 3679620 3679617, overlap 3679621 TTGGCGACAATCACT GCGCCCAGC CCTGTT GCTGGGCGC GTTATTAAGTCTCTA Shewmr7_3102 3679800 - 3681308 + | hypothetical protein Shewmr7_3103 3681298 - 3683577 + | TPR repeat-containing protein TERM 4689 3683615 - 3683587 - f 100 -13.3 -4.58297 | overlap 3683581 CAGTAAAAACACAAA GCGCCTTTCTT ATAACCA AAGAAAGGCGC TAAAGCTAACTGCCT TERM 4690 3684489 - 3684500 + F 70 -3.6 -4.87665 | AATAGGTTTAAAAAA CGTG AATG CGCG TTTTTCTAGATGGCA TERM 4691 3685229 - 3685241 + G 83 -3.3 -5.5208 | opp_overlap 3685229 3685230, overlap 3685230 ATACTTGGCATTAAA CCTGC GTT GCAGC TTTTTTCTGTTGTAG Shewmr7_3104 3684623 - 3685294 + | hypothetical protein Shewmr7_3105 3685407 - 3685721 + | hypothetical protein TERM 4692 3686057 - 3686027 - g 100 -9.9 -5.12172 | overlap 3686018 CACTAACAAAGAAAA CCTTTGGTCAATT ACTAA AATCAACCAAAGG CATCTTAAATATATC Shewmr7_3106 3685834 - 3686352 + | hypothetical protein TERM 4693 3686594 - 3686567 - T 100 -14.8 -2.62263 | AGGTTTGCGAGACGA CCGTCCGCCCCA TGGA TGGGGCGGTCGA GCATCCAAGGATGGA TERM 4694 3686690 - 3686664 - T 95 -13.2 -3.10641 | opp_overlap 3686656 3686667 TAACTCAGCACTTAA CGAGCTAAATTC CCA AAATTTAGCTCG TTAACGTCACTATCT Shewmr7_3107 3687749 - 3686796 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein Shewmr7_3108 3688439 - 3687795 - | hypothetical protein TERM 4695 3687898 - 3687887 - G 84 -4.4 -5.31275 | CTTCATTACAAAAAA GTGA GCTG TCAC TGTCAATAAAGGTCG djlA 3689283 - 3688495 - | DNA-J like membrane chaperone protein Shewmr7_3110 3690045 - 3689377 - | nucleotidyl transferase Shewmr7_3111 3691133 - 3690042 - | aminoglycoside phosphotransferase TERM 4696 3692192 - 3692175 - g 74 -4.8 -4.87665 | opp_overlap 3692175, overlap 3692176 CGCCATCGATAAAAA CTGGCG GGTACT CGCCAA CTTTACCGAAGTGTC Shewmr7_3112 3691249 - 3693546 + | organic solvent tolerance protein TERM 4697 3693593 - 3693581 - f 70 -7.7 -3.68222 | GCTGAACCTCAACAA GGACT GAG AGTCC AAACAGGTTAATGAA TERM 4698 3694543 - 3694529 - g 76 -4.2 -5.01732 | opp_overlap 3694539 3694540, overlap 3694531 AACGGTGCGAAAAAA GGCGAT ATT ATCGGC CCAATCAAGAGTGGC Shewmr7_3113 3693767 - 3695071 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 4699 3695144 - 3695180 + G 100 -15.9 -3.87815 | overlap 3695151 CCCGATTTAGTCGTG CAACTCGCTCAGCAGGC TTG GCCTGCTGAGTTAGTCG TTTGTGCGGATCCCG TERM 4700 3695151 - 3695173 + G 100 -17.8 -3.35467 | overlap 3695144 TAGTCGTGCAACTCG CTCAGCAGGC TTG GCCTGCTGAG TTAGTCGTTTGTGCG TERM 4701 3695733 - 3695719 - g 73 -11.4 -3.02263 | ACACGCGGGTGAAGA CGGCCA TCT TGGCCG GGAAGAAATCGATGT Shewmr7_3114 3695078 - 3696064 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 4702 3696072 - 3696061 - f 71 -3 -5.03314 | GTTATCCTCAAAAAA CTAA ACGA TTAG ATATTAATGAGTAGC TERM 4703 3696550 - 3696540 - g 70 -8.2 -3.68341 | AAGCCCAGGCAACAA GGCC TAT GGCC GCTTAACGGTAATGG TERM 4704 3696691 - 3696676 - g 70 -3.2 -4.87665 | CCCTATGCAGAAAAA CCTTTC CCTT GTAAGG ATGTGAATGTACTGC ksgA 3696079 - 3696885 + | dimethyladenosine transferase TERM 4705 3696902 - 3696919 + F 71 -9.1 -3.26444 | overlap 3696899 CAATATCAGTTTGAT GGGCACT TTAG GGTGCCC TATCTTATTAAAGGG apaG 3696941 - 3697321 + | ApaG apaH 3697343 - 3698167 + | diadenosine tetraphosphatase TERM 4706 3698175 - 3698161 - f 76 -2.8 -5.32608 | AAAAAAGTTAAAAAA GGGTTA AAC TAAGCC CGAGAGTGGTCGATA Shewmr7_3118 3698264 - 3700285 + | methyl-accepting chemotaxis sensory transducer TERM 4707 3700309 - 3700326 + T 100 -10.5 -4.94058 | opp_overlap 3700309 3700307 ACTCAGGTATCAATA GGGTCGC GATT GCGGCCC TTTTCTTTGGCTTGC TERM 4708 3700479 - 3700461 - T 100 -13.2 -5.252 | opp_overlap 3700461 GACGCCCATAAAAAA TGCCGAAC TCA GTTCGGCA TTTTTAACTATCATT TERM 4709 3700461 - 3700479 + T 100 -13.2 -4.72333 | opp_overlap 3700461 GACGCCCATAAAAAA TGCCGAAC TCA GTTCGGCA TTTTTAACTATCATT Shewmr7_3119 3700951 - 3700538 - | hypothetical protein Shewmr7_3120 3701636 - 3701154 - | dihydrofolate reductase Shewmr7_3121 3702132 - 3701659 - | hypothetical protein TERM 4710 3701946 - 3701936 - G 70 -8.2 -3.73402 | ATAGTCCCTACTAAA GCCG CGG CGGC AAAGGTCGCCCATTC Shewmr7_3122 3702890 - 3702129 - | hypothetical protein TERM 4711 3702417 - 3702406 - G 76 -5.8 -4.59376 | ACCAGCAAATTAAAA TGCC GCTT GGCA ATCGCAAGGCGCACC obgE 3704084 - 3702918 - | GTPase ObgE TERM 4712 3703768 - 3703783 + g 80 -10.4 -3.79747 | opp_overlap 3703766 TGAGTCGTTAAATCG CCGAGG ACTT CCTCGG TTTCATCATCAATGG TERM 4713 3703858 - 3703869 + g 71 -7.2 -4.08216 | opp_overlap 3703858 TGACCAGTACAATCA CGGC CACG GCCG TTTTCACCACGCTCA TERM 4714 3704277 - 3704246 - R 100 -11.6 -5.39755 | gap 1, opp_overlap 3704252, overlap 3704252 TAGAAGCATAAAAAA CAG-AAAGCCCCACC AAT GGCGGGGCTTTACAG TATAAGCTAGACTCG TERM 4715 3704252 - 3704270 + r 90 -11.6 -3.63805 | opp_overlap 3704246 3704252 CATAAAAAACAGAAA GCCCCACC AAT GGCGGGGC TTTACAGTATAAGCT TERM 4716 3704270 - 3704252 - R 100 -13.8 -4.68607 | opp_overlap 3704252, overlap 3704246 CATAAAAAACAGAAA GCCCCACC AAT GGCGGGGC TTTACAGTATAAGCT rpmA 3704551 - 3704297 - | 50S ribosomal protein L27 rplU 3704877 - 3704566 - | 50S ribosomal protein L21 TERM 4717 3704724 - 3704739 + g 70 -4.6 -4.59773 | opp_overlap 3704726, overlap 3704726 CGCCAGCTACTAAAG GAGCAC CAAC GTGCAC TTTTTCACCGTCAGC TERM 4718 3704818 - 3704844 + g 75 -9.4 -3.90922 | opp_overlap 3704816 3704820, overlap 3704820 3704842 TAATTTTTCTAAACG AACTGTGTGGCC TGG GGCTACACGGTG TTGTTTACCACCACT TERM 4719 3704820 - 3704842 + g 82 -12 -3.54488 | opp_overlap 3704820 3704816, overlap 3704818 ATTTTTCTAAACGAA CTGTGTGGCC TGG GGCTACACGG TGTTGTTTACCACCA TERM 4720 3705838 - 3705828 - g 73 -5.4 -4.67755 | AGAGTTAGGTAAAAA CATC GGT GATG ATCTCGCTGAAGGTA Shewmr7_3126 3705127 - 3706122 + | trans-hexaprenyltranstransferase TERM 4721 3706175 - 3706137 - f 100 -14.8 -3.92075 | opp_overlap 3706147, overlap 3706138 3706147 ATTGGCAGTGATAAA CCAATAAAAAGGCCTTGC TTA GCAAGGCCTTTTTATTTT TAAGGTTGTCTAGTC TERM 4722 3706174 - 3706138 - f 100 -18.3 -2.94924 | opp_overlap 3706147, overlap 3706137 3706147 TTGGCAGTGATAAAC CAATAAAAAGGCCTTGC TTA GCAAGGCCTTTTTATTT TTAAGGTTGTCTAGT TERM 4723 3706165 - 3706147 - f 100 -14.6 -5.25906 | opp_overlap 3706147, overlap 3706138 3706137 ATAAACCAATAAAAA GGCCTTGC TTA GCAAGGCC TTTTTATTTTTAAGG TERM 4724 3706147 - 3706165 + F 100 -14.6 -5.61881 | opp_overlap 3706138 3706137 3706147 ATAAACCAATAAAAA GGCCTTGC TTA GCAAGGCC TTTTTATTTTTAAGG TERM 4725 3706233 - 3706197 - f 80 -10.3 -3.55444 | opp_overlap 3706196 3706199, overlap 3706199 3706200 TGTCTAGTCCTGAAA TACGTTGACATAAAGAG GAC CTCTTTATGACAACATC AATTAACTCAAGCCG TERM 4726 3706231 - 3706199 - f 100 -12.9 -3.35597 | opp_overlap 3706199 3706196, overlap 3706197 3706200 TCTAGTCCTGAAATA CGTTGACATAAAGAG GAC CTCTTTATGACAACA TCAATTAACTCAAGC TERM 4727 3706199 - 3706231 + F 76 -10.7 -2.54896 | opp_overlap 3706197 3706199 3706200, overlap 3706196 TCTAGTCCTGAAATA CGTTGACATAAAGAG GAC CTCTTTATGACAACA TCAATTAACTCAAGC TERM 4728 3706230 - 3706200 - f 95 -14.2 -2.61144 | opp_overlap 3706199 3706196, overlap 3706199 3706197 CTAGTCCTGAAATAC GTTGACATAAAGAG GAC CTCTTTATGACAAC ATCAATTAACTCAAG Shewmr7_3127 3706223 - 3706618 + | transposase TERM 4729 3706942 - 3706892 - g 70 -2.6 -4.99638 | gap 1, opp_overlap 3706910 AGAGCTACACAAAAA CCACGTTCAGCAAACACTGGATG AAGAAG CATCCTA-ATCTGCTGAAAGAGG AAGGACTGCATGATG TERM 4730 3707217 - 3707237 + G 79 -11.1 -3.54029 | opp_overlap 3707216 3707217 TCAGGCGAGCCAAAT CCAGCCGTC AAT GACGGATGG TTATGATTGCTACCA TERM 4731 3707237 - 3707217 - g 71 -11.1 -2.79327 | opp_overlap 3707217, overlap 3707216 TCAGGCGAGCCAAAT CCAGCCGTC AAT GACGGATGG TTATGATTGCTACCA Shewmr7_3128 3706648 - 3707451 + | integrase catalytic subunit TERM 4732 3707448 - 3707428 - T 100 -12.6 -4.73682 | GTGCACAATAGAAAA GGCCAGCT ACTGG AGCTGGCC TAAAAACTGTCAACC Shewmr7_3129 3708160 - 3707501 - | uracil-DNA glycosylase TERM 4733 3707637 - 3707656 + g 76 -3.4 -5.15634 | opp_overlap 3707627 AGAATGTGATGCTGC GGCGCAGT AATC ACCGCCCC TTTTTTGATGGCATG TERM 4734 3708379 - 3708390 + r 70 -7.2 -3.90588 | GTGCTGCGCCATGTT GCGC CTCG GCGC TTTGATTCGCAAATG Shewmr7_3130 3708894 - 3708460 - | hypothetical protein Shewmr7_3131 3709290 - 3709607 + | hypothetical protein TERM 4735 3709654 - 3709671 + T 100 -11.3 -5.80248 | opp_overlap 3709654 AAATCCCATAAAAAA CGCCATC TTGT GATGGCG TTTTTTTATCTCTTC TERM 4736 3709671 - 3709654 - T 100 -11.3 -5.28826 | opp_overlap 3709654 AAATCCCATAAAAAA CGCCATC TTGT GATGGCG TTTTTTTATCTCTTC Shewmr7_3132 3710328 - 3709714 - | lysine exporter protein LysE/YggA TERM 4737 3710368 - 3710353 - R 100 -10.4 -5.04325 | TTTAAAGCATAAAAA GGCCCT CAAT AGGGCC TTCACAGGAGTGGCA Shewmr7_3133 3711965 - 3710415 - | peptidase S10, serine carboxypeptidase TERM 4738 3710481 - 3710443 - G 74 -3.7 -4.93296 | overlap 3710475 TTAGGATGATAAAAA GCGCGGATATCTTGCAC TAGTT GTGCAAGCGACGCGGGC TCCACATACATCATA TERM 4739 3711640 - 3711600 - G 91 -15.3 -3.53091 | overlap 3711602 ACGTTTTGGGCCAAA GAGGCCCATGTGCAGCCAC AGC GAGGCTGAACCTGGGCCAC CGTTAAAAATAAACG TERM 4740 3711638 - 3711602 - G 100 -16.5 -3.34398 | overlap 3711600 GTTTTGGGCCAAAGA GGCCCATGTGCAGCCAC AGC GAGGCTGAACCTGGGCC ACCGTTAAAAATAAA Shewmr7_3134 3712168 - 3712713 + | thiol:disulfide interchange protein, putative TERM 4741 3712780 - 3712794 + F 100 -11.4 -4.59853 | opp_overlap 3712780 TCGCGCAATAAAAAA GGCTGC ATC GCAGCC TTTTTGCACACTTCA TERM 4742 3712794 - 3712780 - f 100 -11.4 -5.4505 | opp_overlap 3712780 TCGCGCAATAAAAAA GGCTGC ATC GCAGCC TTTTTGCACACTTCA Shewmr7_3135 3713226 - 3714692 + | Fis family transcriptional regulator TERM 4743 3714733 - 3714702 - f 100 -20.4 -4.70626 | opp_overlap 3714703 3714711 GAATAACCTCAAAAA CGCGATATATCGCT AATT AGCGATATATCGCG ACACCCACTAAATCA TERM 4744 3715453 - 3715465 + G 71 -10.5 -3.04715 | overlap 3715452 ATTTAGATATTTTTA CCGGC AAC GCCGG CTTTTGGACGACCTG Shewmr7_3136 3714852 - 3716282 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4745 3716298 - 3716321 + F 93 -12.5 -3.06831 | opp_overlap 3716313, overlap 3716287 CGCGTAATGCGGCAA TGTGCTCGC CGATAA GCGAGCACA TTGCATCACAGTTAG Shewmr7_3137 3716614 - 3716838 + | hypothetical protein TERM 4746 3717011 - 3716999 - g 79 -9.1 -4.23892 | GTCAATGAGCTAAAA TCGCG TCC CGCGA GTAAGGGTCAGTATG Shewmr7_3138 3716831 - 3717613 + | methionine aminopeptidase, type I Shewmr7_3139 3717850 - 3719454 + | AMP-dependent synthetase and ligase TERM 4747 3719530 - 3719500 - T 100 -15.6 -4.35524 | opp_overlap 3719500 3719505, overlap 3719505 GTCTTAAATCCAAAA CAAAACCCCAGAGC AAT ACTCTGGGGTTTTA TTTGCATTACATTCC TERM 4748 3719500 - 3719530 + T 100 -12.7 -3.78409 | opp_overlap 3719500 3719505, overlap 3719505 GTCTTAAATCCAAAA CAAAACCCCAGAG CAATA CTCTGGGGTTTTA TTTGCATTACATTCC TERM 4749 3719505 - 3719525 + T 100 -12.6 -4.94058 | opp_overlap 3719500 3719505, overlap 3719500 AAATCCAAAACAAAA CCCCAGAG CAATA CTCTGGGG TTTTATTTGCATTAC TERM 4750 3719525 - 3719505 - T 100 -13.3 -5.14698 | opp_overlap 3719505 3719500, overlap 3719500 AAATCCAAAACAAAA CCCCAGAGC AAT ACTCTGGGG TTTTATTTGCATTAC Shewmr7_3140 3721397 - 3719556 - | lipid ABC transporter ATPase/inner membrane protein TERM 4751 3721121 - 3721081 - G 100 -8.2 -5.33405 | overlap 3721089 GTCATCAAATAAAAA CGACAAAACACCGCAGTG CCACT CACTGCGGTGATCAGCAG CACCAACAGAATAAT TERM 4752 3721113 - 3721089 - G 100 -15.8 -4.73912 | overlap 3721081 ATAAAAACGACAAAA CACCGCAGTG CCACT CACTGCGGTG ATCAGCAGCACCAAC TERM 4753 3721266 - 3721244 - G 71 -7.7 -4.07831 | gap 1 TCAAAAGAAATACAA TCGCC-GCGA CCAC CCGCAGGCGA TAGGGCTTAAGAAAT Shewmr7_3141 3721531 - 3721872 + | hypothetical protein Shewmr7_3142 3722234 - 3721869 - | hypothetical protein Shewmr7_3143 3723792 - 3722317 - | FAD dependent oxidoreductase TERM 4754 3723110 - 3723085 - G 70 -11.1 -2.64099 | opp_overlap 3723085 3723103, overlap 3723084 CGCGGGTACCACAAT CGCCGCACGAA CATT TCCTTGCGGCG TCTGTAATTGAGTCT Shewmr7_3144 3724124 - 3723789 - | hypothetical protein Shewmr7_3145 3724323 - 3724874 + | hypothetical protein Shewmr7_3146 3724998 - 3725855 + | extracellular solute-binding protein Shewmr7_3147 3726309 - 3725860 - | UspA domain-containing protein TERM 4755 3726074 - 3726086 + g 78 -4.1 -5.14563 | TGCTGCATCTCCTGC TGTAG GCT CTGCA TTTTTTCATCGACAA TERM 4756 3726451 - 3726436 - R 82 -6 -4.96773 | opp_overlap 3726434 3726436 GCAATCAAAAACAAA GGGCGC CTTA GTGCCC TCTTGTACCTCTGTT Shewmr7_3148 3726903 - 3726472 - | UspA domain-containing protein Shewmr7_3149 3727321 - 3726923 - | hypothetical protein TERM 4757 3727439 - 3727462 + H 100 -12.6 -4.82901 | opp_overlap 3727443, overlap 3727443 CGCTGTTCGCTAGGA TAAACCGACT AATC AGTCGGTTTA TTTTTATACGCCACA TERM 4758 3727443 - 3727458 + H 100 -9 -4.96501 | opp_overlap 3727443, overlap 3727439 GTTCGCTAGGATAAA CCGACT AATC AGTCGG TTTATTTTTATACGC TERM 4759 3727458 - 3727443 - H 80 -9 -3.96148 | opp_overlap 3727443 3727439 GTTCGCTAGGATAAA CCGACT AATC AGTCGG TTTATTTTTATACGC Shewmr7_3150 3727519 - 3728943 + | aldehyde dehydrogenase TERM 4760 3729472 - 3729483 + G 78 -2.2 -5.28778 | gap 1, opp_overlap 3729468 CACGGCCAATACTTG GCAGC CAC GC-GC TTTTTTATCGATAAT Shewmr7_3151 3728965 - 3729573 + | TetR family transcriptional regulator TERM 4761 3729610 - 3729585 - T 100 -11.9 -5.71983 | gap 1, opp_overlap 3729582 3729585 TTAACCATAAAAAAA CCGAGCCAGACA TAT CG-CTGGCTCGG TGCTTGTTATCGCAA TERM 4762 3729585 - 3729610 + T 86 -11.9 -2.98545 | opp_overlap 3729585, overlap 3729582 TTAACCATAAAAAAA CCGAGCCAG ACATATCG CTGGCTCGG TGCTTGTTATCGCAA Shewmr7_3152 3730438 - 3729632 - | curli production assembly/transport component CsgG Shewmr7_3153 3730833 - 3730438 - | curli production assembly/transport component CsgF, putative Shewmr7_3154 3731254 - 3730844 - | curli production assembly/transport component CsgE, putative Shewmr7_3155 3733154 - 3731487 - | periplasmic sensor signal transduction histidine kinase TERM 4763 3732368 - 3732353 - G 74 -4.7 -4.8048 | CTTTGATATGAAAAA GATGC CGCGCC GCATC GTTGGCATACATGAG TERM 4764 3732777 - 3732757 - G 79 -12.5 -3.06583 | ATAACAGGTTCAACA GGCGCAACC ATT GGTGGCGCC TCAATAGGATGGGGG Shewmr7_3156 3734650 - 3733196 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 4765 3733916 - 3733904 - G 71 -5.5 -4.57341 | overlap 3733906 AATTTCGTCCAAAAA TAGCG TGC CGCCA TCGGCCGCCTCAAAG TERM 4766 3733924 - 3733906 - G 72 -8.1 -3.90048 | gap 1, overlap 3733904 TTTCGTCCAAAAATA GCGTGCCG CCAT CGGC-CGC CTCAAAGCGACCAAT TERM 4767 3734029 - 3734041 + g 73 -3.4 -5.04249 | AGGCGCCCACATTCA CCTT GATAA AAGG TTTGTTTTTTAAAGG TERM 4768 3734346 - 3734356 + g 70 -8.2 -3.71527 | TTGCCCATATAATCG GCGG CGC CCGC TTTAACTAATTCCAC TERM 4769 3734461 - 3734489 + g 84 -13.9 -3.38207 | ACAGCTGTCGCCCTT CTTCACCCGAGGT GGT ATCGCGGGTGAAG TTCATATCTTGGATA TERM 4770 3734727 - 3734700 - R 100 -14.4 -5.24551 | opp_overlap 3734700 TTAAAGTAACAAAAA GTGCAATAACAT CCTA ATGTTATTGCAC TTAATGCCCTTCATC TERM 4771 3734700 - 3734727 + r 100 -14.4 -3.19157 | opp_overlap 3734700 TTAAAGTAACAAAAA GTGCAATAACAT CCTA ATGTTATTGCAC TTAATGCCCTTCATC Shewmr7_3157 3735945 - 3734746 - | hypothetical protein Shewmr7_3158 3737261 - 3735957 - | hypothetical protein Shewmr7_3159 3738010 - 3737270 - | ABC transporter related Shewmr7_3160 3738482 - 3738111 - | hypothetical protein Shewmr7_3161 3739744 - 3738482 - | RND family efflux transporter MFP subunit TERM 4772 3739902 - 3739889 - H 79 -6.7 -4.69326 | opp_overlap 3739891, overlap 3739891 ATATTTAAGATAAAA GTGTC CGCG GACAC CGAGGGCTTTATTAG TERM 4773 3739891 - 3739909 + H 76 -8 -4.16284 | opp_overlap 3739889 3739891 ATTTAAGATAAAAGT GTCCGCGG ACA CCGAGGGC TTTATTAGAAAGTGT TERM 4774 3739947 - 3739960 + H 72 -8.1 -3.87815 | TTTTCGCGAAAGTGT CCGCT GAAA AGCGG TTTATGAACATAGGA Shewmr7_3162 3740103 - 3741146 + | dihydroorotase TERM 4775 3741228 - 3741213 - f 77 -10.4 -3.0806 | opp_overlap 3741213 TCTAAACCGTTAAGA GTCGCC TTAG GGCGAC TTTTTTATAACCAGC TERM 4776 3741213 - 3741228 + F 100 -10.4 -5.24129 | opp_overlap 3741213 TCTAAACCGTTAAGA GTCGCC TTAG GGCGAC TTTTTTATAACCAGC TERM 4777 3741292 - 3741281 - f 75 -2.2 -5.31275 | TTTTACGAGAAAAAA CATG AATA CACG GAAGTTACTTAAGCT TERM 4778 3741794 - 3741783 - g 72 -3.6 -4.84017 | AACGGCCCACAAAAA GGCA TTCC CGCC ATTAATCAGTGGCTT TERM 4779 3741834 - 3741818 - g 91 -8.7 -4.82901 | overlap 3741800 GTGGCTTGAGAAAAA GCTCACC GAT GATGAGC AGCTGGCACAGACCT TERM 4780 3741898 - 3741880 - g 70 -8.8 -3.53761 | GAATGTTGTCGCAAA TGGGCCAC TTT GTGGCCGA TGAAACCTATGCAGA Shewmr7_3163 3741282 - 3742328 + | hypothetical protein TERM 4781 3742571 - 3742593 + G 71 -6.3 -4.32857 | gap 1, overlap 3742572 CGATCTAGCAAGCTT TGTCG-CGCT CTTT AGCGACGACG TTTGTATTTACCGCC Shewmr7_3164 3742488 - 3742844 + | hypothetical protein TERM 4782 3743059 - 3743040 - f 88 -9.2 -4.26076 | opp_overlap 3743038 3743033 3743040 TTAGGGTTATTAAAA GGGCGATG CACT CAACGCCC TCTTCACTTTGCCCA TERM 4783 3743040 - 3743059 + F 72 -9.2 -3.20349 | opp_overlap 3743040, overlap 3743038 3743033 TTAGGGTTATTAAAA GGGCGATG CACT CAACGCCC TCTTCACTTTGCCCA Shewmr7_3165 3743091 - 3743384 + | hypothetical protein TERM 4784 3743395 - 3743423 + T 89 -11.8 -3.29211 | opp_overlap 3743395, overlap 3743390 AGTAATGATAAAAAA CACCCCGATAAT CAAAT ATTTTCGGGGTG TTAGATTTGCCATTA TERM 4785 3743423 - 3743395 - T 100 -11.8 -5.38249 | opp_overlap 3743395 3743390 AGTAATGATAAAAAA CACCCCGATAAT CAAAT ATTTTCGGGGTG TTAGATTTGCCATTA Shewmr7_3166 3744640 - 3743471 - | hypothetical protein Shewmr7_3167 3745243 - 3744707 - | prepilin-type cleavage/methylation-like protein Shewmr7_3168 3745668 - 3745252 - | type IV pilus modification protein PilV Shewmr7_3169 3746156 - 3745698 - | methylation site containing protein Shewmr7_3170 3746577 - 3746182 - | methylation site containing protein TERM 4786 3747327 - 3747298 - R 72 -9.4 -3.09823 | opp_overlap 3747301, overlap 3747293 3747301 CTTGTGAAAACCATA TAAGGAGGATAG AACGAA CTTTCCTCCTTA GTAGAGTTTAGGGTG TERM 4787 3747366 - 3747393 + r 100 -17.2 -2.63301 | opp_overlap 3747360 3747368, overlap 3747368 CAACTTAAAGCCCAA GAGGGGCAAATA GGAT TATTTGCCCCTC TACTATGACACTGTG TERM 4788 3747391 - 3747368 - R 100 -14 -3.12936 | opp_overlap 3747366 3747368, overlap 3747360 ACTTAAAGCCCAAGA GGGGCAAATA GGAT TATTTGCCCC TCTACTATGACACTG TERM 4789 3747368 - 3747391 + r 95 -14 -2.85668 | opp_overlap 3747360 3747368, overlap 3747366 ACTTAAAGCCCAAGA GGGGCAAATA GGAT TATTTGCCCC TCTACTATGACACTG TERM 4790 3747455 - 3747445 - R 70 -5.4 -4.48713 | CGCAGCAAGAACAAA GATG ATA CATC GCCGTTATTGAGTGC Shewmr7_3171 3747684 - 3747460 - | hypothetical protein Shewmr7_3172 3748342 - 3748028 - | hypothetical protein Shewmr7_3173 3748779 - 3748396 - | hypothetical protein Shewmr7_3174 3749682 - 3748858 - | periplasmic binding protein TERM 4791 3748937 - 3748887 - G 70 -10.6 -2.99473 | gap 2, opp_overlap 3748886 3748898 CCAAAGCACCACAGA CCG-CCT-TCACACCGAGTAACGC TCTGG GCGTTGCCCGGTGTAATAGATCGG CATTTAATTGATAAA TERM 4792 3749476 - 3749492 + g 85 -3.5 -5.41746 | opp_overlap 3749474 3749476 3749477, overlap 3749477 CTGGATCCCATAATA CCCCCCG ATA CTGGGGA TTTTTTTCGCCGCTT Shewmr7_3175 3750734 - 3749697 - | hypothetical protein Shewmr7_3176 3751525 - 3750890 - | cob(I)yrinic acid a,c-diamide adenosyltransferase Shewmr7_3177 3753179 - 3751554 - | cobyric acid synthase TERM 4793 3752906 - 3752893 - G 79 -6.7 -4.64676 | overlap 3752896 3752898 TGAGGCGCAAGAAAA CAAGC TGCG GCTTG CAGCGCCTGAGCGCG TERM 4794 3752910 - 3752896 - G 74 -7.1 -4.43307 | overlap 3752893 3752898 GGCGCAAGAAAACAA GCTGC GGCTT GCAGC GCCTGAGCGCGGCCA TERM 4795 3753243 - 3753213 - R 74 -4.6 -4.76191 | overlap 3753214 3753217 3753218 ACAGAGGAAAATAAA CTAACGGGGGATCG ATT CGCTCCCTCACTAA GAATGCGTCGATAAC Shewmr7_3178 3753869 - 3753267 - | adenosylcobinamide kinase TERM 4796 3753563 - 3753520 - G 74 -8 -4.10657 | opp_overlap 3753551, overlap 3753521 CGAGAGCTGGCAAAA TCCAAGGCAAAGTCCGATTC CGTT GAAGCGGGCTCGGCCTCGGG GCTCTGTGCAAGTAA TERM 4797 3753562 - 3753521 - G 74 -11.5 -3.06073 | opp_overlap 3753551, overlap 3753520 GAGAGCTGGCAAAAT CCAAGGCAAAGTCCGATTC CGTT GAAGCGGGCTCGGCCTCGG GGCTCTGTGCAAGTA cobS 3754654 - 3753866 - | cobalamin synthase cobT 3755803 - 3754751 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Shewmr7_3181 3757101 - 3755953 - | transport system permease protein TERM 4798 3756424 - 3756412 - G 74 -7.7 -4.2142 | AAGACTCCAAAACAA TACCG ATG CGGTA GCCTGCGGGCTGGCA Shewmr7_3182 3758063 - 3757098 - | ABC transporter related TERM 4799 3757801 - 3757791 - G 70 -8.2 -3.71378 | opp_overlap 3757799 CACTTTACAGGCAAA CGCC TTG GGCG ACAGTTCGCTAATAT Shewmr7_3183 3759258 - 3758536 - | phosphoglycerate mutase TERM 4800 3759870 - 3759850 - g 70 -3.1 -4.82855 | opp_overlap 3759854, overlap 3759851 3759854 GACGAAATCGAAAAA GCCACGGGG AAA CCCCGTTAT GTTGCCGGTGTGTTA TERM 4801 3759866 - 3759854 - g 70 -10.5 -2.87035 | opp_overlap 3759854, overlap 3759851 3759850 AAATCGAAAAAGCCA CGGGG AAA CCCCG TTATGTTGCCGGTGT TERM 4802 3759854 - 3759866 + G 80 -10.5 -3.67052 | opp_overlap 3759854 3759851 3759850 AAATCGAAAAAGCCA CGGGG AAA CCCCG TTATGTTGCCGGTGT TERM 4803 3762502 - 3762490 - g 74 -4.8 -4.75372 | opp_overlap 3762498 ATCATCGATGAAAAA TGGC TTACC GCCA AGGGCGTGATTGGGC metH 3759469 - 3763203 + | B12-dependent methionine synthase TERM 4804 3763288 - 3763266 - T 70 -7.6 -3.66497 | GAATAAAGCGTTAAA GTCGTGGGGC TTC ACCCCACACC CGATGTTGCTGGTTC TERM 4805 3763359 - 3763371 + T 75 -9.1 -3.6106 | opp_overlap 3763357 ATGATGCAACTCATT GCCTG CCG CAGGC TTTCGCACTGTTACC TERM 4806 3763619 - 3763593 - T 73 -8.7 -3.53012 | opp_overlap 3763613, overlap 3763597 GCCCCTTCCCCGAAA GCTACGCAGAC GTCCT GTCTGCGTCAC GCGCCATTTTTAAAT TERM 4807 3763615 - 3763597 - T 74 -10.3 -2.64155 | opp_overlap 3763613, overlap 3763593 CTTCCCCGAAAGCTA CGCAGAC GTCCT GTCTGCG TCACGCGCCATTTTT Shewmr7_3185 3764675 - 3763761 - | hypothetical protein Shewmr7_3186 3765256 - 3764675 - | hypothetical protein Shewmr7_3187 3765857 - 3765438 - | hypothetical protein Shewmr7_3188 3766408 - 3765878 - | hypothetical protein TERM 4808 3766540 - 3766567 + r 91 -12 -3.57144 | opp_overlap 3766536 3766539 3766537 3766540, overlap 3766544 3766560 3766565 3766566 GTTGAAGAAAATCAC GTGAGCGAGGCA TGGA TGCCTCGCTAGC TTTCGGGGTACAGGA TERM 4809 3766567 - 3766540 - R 70 -9.8 -2.54841 | opp_overlap 3766540 3766544 3766560 3766565 3766566, overlap 3766536 3766539 3766537 GTTGAAGAAAATCAC GTGAGCGAGGCA TGGA TGCCTCGCTAGC TTTCGGGGTACAGGA TERM 4810 3766544 - 3766563 + r 93 -13.6 -2.64803 | opp_overlap 3766536 3766540 3766539 3766537, overlap 3766540 3766560 AAGAAAATCACGTGA GCGAGGCA TGGA TGCCTCGC TAGCTTTCGGGGTAC TERM 4811 3766566 - 3766597 + r 76 -11 -2.62038 | gap 1, opp_overlap 3766540 3766539 3766537, overlap 3766540 3766565 3766560 ATGGATGCCTCGCTA GCTTTCGG-GGTACA GGA TGTACCATCGGAAGC GTTAGTGATTTTCGA TERM 4812 3766705 - 3766727 + r 70 -7.6 -3.57792 | AGTCCTCCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTAAACATACCTCG TERM 4813 3766786 - 3766763 - R 71 -3.1 -5.0133 | overlap 3766764 CAGGCCGCTAAAAAA CCTGTTCAC GACTTT GTGAACCGA CAAAGCTCTGCCATG TERM 4814 3766891 - 3766865 - R 83 -11 -3.48772 | overlap 3766872 3766873 AATGCTTTTATAGAA TCTAGAATCTAG AAT CTAGAATCTAGA ATCTAGCACCTAGCA TERM 4815 3766897 - 3766873 - R 71 -10.1 -2.67425 | overlap 3766865 3766872 3766894 TATAGAATCTAGAAT CTAGAATCTAG AAT CTAGAATCTAG CACCTAGCACCTAGC TERM 4816 3767408 - 3767390 - R 76 -6.6 -4.56775 | overlap 3767393 3767394 ACTCTTGTTTAAAAA TCAGGGGG AAG CCCCACGA CCTTGATACATCTCG Shewmr7_3189 3769325 - 3767490 - | hypothetical protein TERM 4817 3769659 - 3769685 + r 73 -8.7 -3.53012 | opp_overlap 3769656 3769655 3769667, overlap 3769663 3769683 3769684 GTTGAAGGAAATCGC GTAACGCAGAC AGGAC GTCTGCGTAGC TTTCGGGGGGAAGGG TERM 4818 3769663 - 3769681 + r 74 -10.3 -2.64155 | opp_overlap 3769656 3769655 3769667, overlap 3769659 AAGGAAATCGCGTAA CGCAGAC AGGAC GTCTGCG TAGCTTTCGGGGGGA TERM 4819 3769823 - 3769845 + r 74 -7.6 -3.91911 | AGTCCTCCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTGATTCACCTCGG Shewmr7_3190 3770938 - 3769976 - | twin-arginine translocation pathway signal TERM 4820 3771121 - 3771133 + H 71 -3.3 -5.05601 | overlap 3771122 GGCATGAGCTTTTTA TTCCC TAG GGGAC TTTTTGTGTATAATG TERM 4821 3772632 - 3772621 - g 71 -5.8 -4.28656 | overlap 3772612 AGTTAACAGGCAAAA TGGC CTAT GCCA GCCCCGAATCAGAAT Shewmr7_3191 3771210 - 3773498 + | hypothetical protein TERM 4822 3773980 - 3773965 - g 73 -5.4 -4.65078 | overlap 3773976 ATATCCGCAACAAAA CCACCT ATAA AGATGG CCAAGCCGTCGGTAT Shewmr7_3192 3773508 - 3775241 + | MORN repeat-containing protein Shewmr7_3193 3775392 - 3777701 + | hypothetical protein TERM 4823 3777782 - 3777743 - T 100 -18 -3.55444 | opp_overlap 3777736 3777769 CCCTCAGTGTTTAAA GATTGCTGAAGCTGCCTG TTTA CGGTCAGCTTCAGCAATC ACCTTAGGCTGTTAT Shewmr7_3194 3779356 - 3777794 - | rhomboid family protein TERM 4824 3778426 - 3778407 - G 74 -3.6 -5.01732 | gap 1, opp_overlap 3778397, overlap 3778408 3778410 AACTCGGCTAAAAAA CCATAAAGC TCC GCCTTA-GG TTTTTCTAGGCTTAG TERM 4825 3779423 - 3779376 - R 82 -5.7 -4.96848 | gap 2, opp_overlap 3779392, overlap 3779390 TCCTTGAGAGAAAAA TCCCGCCAATGATACG--GCGTA TCGC CACGCAACGCATCTTTAGCAGGA CGATTGCTTGAATTT TERM 4826 3779523 - 3779483 - R 100 -13.5 -3.50535 | opp_overlap 3779494, overlap 3779485 3779494 AAGTGCTAGAAAAAT GACAACAAAAAGGCCAGAA CGA TTCTGGCCTTTTTATTGAG CGATAAGCAATTAAT TERM 4827 3779521 - 3779485 - R 100 -20.5 -3.31915 | opp_overlap 3779494, overlap 3779483 3779494 GTGCTAGAAAAATGA CAACAAAAAGGCCAGAA CGA TTCTGGCCTTTTTATTG AGCGATAAGCAATTA TERM 4828 3779512 - 3779494 - R 100 -13.2 -5.25772 | opp_overlap 3779494, overlap 3779485 3779483 AAATGACAACAAAAA GGCCAGAA CGA TTCTGGCC TTTTTATTGAGCGAT TERM 4829 3779494 - 3779512 + r 100 -13.2 -5.06816 | opp_overlap 3779494 3779485 3779483 AAATGACAACAAAAA GGCCAGAA CGA TTCTGGCC TTTTTATTGAGCGAT pbpG 3780501 - 3779545 - | D-alanyl-D-alanine endopeptidase TERM 4830 3780360 - 3780375 + g 100 -6.1 -6.07627 | TATTGGCGGCCACTT CCTGC TGTTTT GCAGG TTTTTTTTTCGCCGT TERM 4831 3780384 - 3780398 + g 73 -3.4 -4.91109 | overlap 3780384 3780385 TTGCAGGTTTTTTTT TCGCCG TGG CGGTGC TTTTTGTAGTGACAG TERM 4832 3780792 - 3780821 + r 93 -12.3 -3.19642 | opp_overlap 3780799, overlap 3780799 AAATATCACAGCCAT AAAAAAACCAGCC ATTA GGCTGGTTTTTTA TTACTCGCTCATGCT TERM 4833 3780814 - 3780799 - R 100 -10.4 -5.65177 | opp_overlap 3780792 3780799 ACAGCCATAAAAAAA CCAGCC ATTA GGCTGG TTTTTTATTACTCGC TERM 4834 3780799 - 3780814 + r 100 -10.4 -5.5112 | opp_overlap 3780799, overlap 3780792 ACAGCCATAAAAAAA CCAGCC ATTA GGCTGG TTTTTTATTACTCGC lysS 3782367 - 3780865 - | lysyl-tRNA synthetase TERM 4835 3782168 - 3782180 + g 77 -9.1 -4.09685 | TTTGCCATGATACGG CCAGC GAT GCTGG TTTTAAAACCTAAGG Shewmr7_3197 3783455 - 3782397 - | peptide chain release factor 2 TERM 4836 3783836 - 3783818 - H 70 -5.2 -4.49781 | opp_overlap 3783818 AAAACACGTATAAAA TGCCGAGA TAA TCACAGCA TTTCACCAACAAAGC TERM 4837 3784254 - 3784237 - g 77 -10.5 -3.56594 | overlap 3784238 TTAAAGCCTGTGAAA CGCCCGC CGAA GCGGGCA TGAAGGTCATCACCC TERM 4838 3784253 - 3784238 - g 74 -11.8 -2.73635 | overlap 3784237 TAAAGCCTGTGAAAC GCCCGC CGAA GCGGGC ATGAAGGTCATCACC TERM 4839 3785066 - 3785025 - g 76 -4.9 -5.01732 | overlap 3785027 AAGTTGGGCAAAAAA GTCGCCGTGATTGGTGGTG GCAA CACCGCCATCGACTGCGCC CGCACCGCCGTGCGC TERM 4840 3785528 - 3785556 + G 77 -11.7 -3.17212 | overlap 3785530 CGCCGTAGCCGCCAT TGGCGATGGCCGT AAA GCGGCAATCGCTA TTGATAAGATGCTAA TERM 4841 3785530 - 3785554 + G 77 -12.1 -3.1478 | overlap 3785528 CCGTAGCCGCCATTG GCGATGGCCGT AAA GCGGCAATCGC TATTGATAAGATGCT TERM 4842 3786524 - 3786507 - g 95 -5.5 -5.58522 | overlap 3786510 3786519 GAGATAAAACAAAAA GATGGCA GCAA TGCCCTC GCCAGCCTAGCCTCG TERM 4843 3786911 - 3786899 - g 73 -9.1 -3.74693 | TGTGATGCTATTAAA CGCCA TTA TGGCG GAAATTATTCGCCAC Shewmr7_3198 3784011 - 3788309 + | formate dehydrogenase, alpha subunit TERM 4844 3788351 - 3788381 + T 86 -12 -3.10677 | opp_overlap 3788357 3788358, overlap 3788355 3788357 3788358 TGCCTGAGCTGGATA TAAAAATGGGAGAC ACT GTCTCCCGTCTTTA TTCGCTAACTTAATT TERM 4845 3788355 - 3788377 + T 79 -8.4 -4.21631 | opp_overlap 3788357 3788358, overlap 3788351 3788357 3788358 TGAGCTGGATATAAA AATGGGAGAC ACT GTCTCCCGTC TTTATTCGCTAACTT TERM 4846 3788357 - 3788375 + T 84 -11 -3.70307 | opp_overlap 3788357 3788358, overlap 3788355 3788351 3788358 AGCTGGATATAAAAA TGGGAGAC ACT GTCTCCCG TCTTTATTCGCTAAC TERM 4847 3788375 - 3788357 - T 100 -8.8 -4.9725 | opp_overlap 3788357 3788355 3788351 3788358, overlap 3788358 AGCTGGATATAAAAA TGGGAGAC ACT GTCTCCCG TCTTTATTCGCTAAC TERM 4848 3788358 - 3788374 + T 89 -12.3 -2.81702 | opp_overlap 3788357 3788358, overlap 3788357 3788355 3788351 GCTGGATATAAAAAT GGGAGAC ACT GTCTCCC GTCTTTATTCGCTAA TERM 4849 3788374 - 3788358 - T 100 -12.3 -3.57627 | opp_overlap 3788358 3788357 3788355 3788351, overlap 3788357 GCTGGATATAAAAAT GGGAGAC ACT GTCTCCC GTCTTTATTCGCTAA Shewmr7_3199 3790081 - 3788417 - | methyl-accepting chemotaxis sensory transducer TERM 4850 3790082 - 3790107 + r 70 -2.5 -4.99643 | GCTTAAATTCGACAT GCTTGCTTACT CCAG GGTGATCGAGC TTATTTTTTTTAATA Shewmr7_3200 3791389 - 3790217 - | chromate transporter TERM 4851 3791502 - 3791480 - R 100 -13.5 -5.72622 | opp_overlap 3791476 TCCATAAACAAAAAA GCCGGCAAA ATCCA TTTGCCGGC ATCCTAAATTCAGGA Shewmr7_3201 3796669 - 3791552 - | cell wall anchor domain-containing protein Shewmr7_3202 3796963 - 3797805 + | MltA-interacting MipA family protein Shewmr7_3203 3797795 - 3798214 + | hypothetical protein Shewmr7_3204 3798211 - 3798927 + | two component transcriptional regulator TERM 4852 3798935 - 3798922 - f 81 -5.3 -5.09895 | opp_overlap 3798909 3798913 3798927 3798934, overlap 3798909 3798924 TACTTACCTAAAAAA GGTTA GGTT TAACC GAAATGAAATTTCAG TERM 4853 3799989 - 3799970 - g 74 -4.2 -4.81249 | GGGCAAAGGCAAAAA GCTCGTAG TCGC CTTCGAAC GGGACAGCCAACAGA TERM 4854 3800063 - 3800050 - g 80 -2.3 -5.42862 | opp_overlap 3800051, overlap 3800051 ATATCGTCAAAAAAA TTGCC ACTT GGCAT TATGGCACGCTGGAG Shewmr7_3205 3798939 - 3800168 + | periplasmic sensor signal transduction histidine kinase rumB 3801337 - 3800183 - | 23S rRNA methyluridine methyltransferase Shewmr7_3207 3802707 - 3801517 - | FAD dependent oxidoreductase Shewmr7_3208 3803270 - 3802773 - | MarR family transcriptional regulator TERM 4855 3803369 - 3803350 - H 74 -6.6 -4.27617 | opp_overlap 3803350 3803349, overlap 3803365 TATAGTTTATCAAAA TTAAATTG TGCA CAATTTAA ATTATCTTTAAAACT Shewmr7_3209 3803399 - 3803824 + | OsmC family protein TERM 4856 3803859 - 3803825 - f 76 -9.4 -3.51232 | opp_overlap 3803812 3803851 3803858, overlap 3803858 GCGGCGTTAAACTAA GCCTTTAAGACAACAG TCA CTATCGTCTAAAAAGC ACCTCAGGGTGCTTT TERM 4857 3803851 - 3803878 + F 100 -15.8 -3.48395 | opp_overlap 3803825 3803858, overlap 3803858 AACAGTCACTATCGT CTAAAAAGCACC TCAG GGTGCTTTTTAG TTATCTGCCGCGAAT TERM 4858 3803871 - 3803858 - f 86 -8.1 -4.58663 | opp_overlap 3803851 3803858, overlap 3803825 ACTATCGTCTAAAAA GCACC TCAG GGTGC TTTTTAGTTATCTGC TERM 4859 3803858 - 3803871 + F 95 -8.1 -4.96646 | opp_overlap 3803825 3803858, overlap 3803851 ACTATCGTCTAAAAA GCACC TCAG GGTGC TTTTTAGTTATCTGC Shewmr7_3210 3804051 - 3805475 + | hypothetical protein Shewmr7_3211 3805571 - 3805756 + | hypothetical protein TERM 4860 3805782 - 3805802 + T 100 -18.3 -5.63517 | opp_overlap 3805782 AGAGATTGATAAAAA GCGCCCCGA ACA TCGGGGCGC TTTTTTGTTTAAGGC TERM 4861 3805802 - 3805782 - T 100 -18.3 -4.90455 | opp_overlap 3805782 AGAGATTGATAAAAA GCGCCCCGA ACA TCGGGGCGC TTTTTTGTTTAAGGC Shewmr7_3212 3806165 - 3805875 - | hypothetical protein Shewmr7_3213 3806751 - 3806227 - | methyltransferase type 12 Shewmr7_3214 3807158 - 3806748 - | hypothetical protein TERM 4862 3807704 - 3807688 - g 80 -4.4 -5.18561 | GAAAGATTCAAAAAA CAGCAC TAGCC ATGCTG ATCTCTGGTGCGATG Shewmr7_3215 3807663 - 3809453 + | flavocytochrome c TERM 4863 3809546 - 3809565 + F 100 -10.7 -5.77632 | opp_overlap 3809546 AGCTTATCAGTACAA GCGAGCC GTCAGG GGCTCGC TTTTTTTATGATTTT TERM 4864 3809565 - 3809546 - f 83 -10.7 -3.44229 | opp_overlap 3809546 AGCTTATCAGTACAA GCGAGCC GTCAGG GGCTCGC TTTTTTTATGATTTT Shewmr7_3216 3809699 - 3810688 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein TERM 4865 3810741 - 3810716 - f 100 -16.3 -3.57462 | overlap 3810703 3810735 TACCTGACTGCTAAA GTGAGGCTTCA ACAT TGAAGCCTCAC AGAGGAAACTAAATA Shewmr7_3217 3810756 - 3811493 + | dienelactone hydrolase TERM 4866 3811548 - 3811513 - T 100 -12.8 -5.67283 | opp_overlap 3811513 3811518 AAGCGAAACAAAAAA GCCAACTCATTAATCA ATCG TAATTAATGGGTTGGC TTAGCTAAATACTTA TERM 4867 3811513 - 3811548 + T 95 -12.8 -3.0894 | opp_overlap 3811513, overlap 3811518 AAGCGAAACAAAAAA GCCAACTCATTAATCA ATCG TAATTAATGGGTTGGC TTAGCTAAATACTTA Shewmr7_3218 3812136 - 3811591 - | hypothetical protein TERM 4868 3812328 - 3812312 - R 75 -5.1 -4.90381 | overlap 3812313 GGGAAGATAATAAAA CTGAGTA TCT CACCCAG CGCCAACAACAGTTT Shewmr7_3219 3812930 - 3812385 - | hypothetical protein TERM 4869 3813416 - 3813394 - g 73 -11.9 -2.55896 | overlap 3813387 3813391 3813393 CTTATCAACGAAGAT GCCGTCGCC TTTAT GGCGTCGGC CGAGCATAAAAAGGT Shewmr7_3220 3813031 - 3813774 + | spermine synthase Shewmr7_3221 3813864 - 3815399 + | leucyl aminopeptidase TERM 4870 3815491 - 3815473 - f 89 -11.8 -3.30453 | opp_overlap 3815473 GAGAAGCTAGATTAA GGGATATC GTC GATATCCC TTTTTTATTGCCCTG TERM 4871 3815473 - 3815491 + F 100 -11.8 -5.46657 | opp_overlap 3815473 GAGAAGCTAGATTAA GGGATATC GTC GATATCCC TTTTTTATTGCCCTG TERM 4872 3815752 - 3815742 - g 71 -5.4 -4.56093 | opp_overlap 3815742 AATGGAAGCATAAAA TGAC TCA GTCA ATTATCAACAGCACA Shewmr7_3222 3815741 - 3816310 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 4873 3817434 - 3817421 - g 73 -3.1 -4.93968 | gap 1 ATGGATAACCAAAAA GCC-GT TAA ACTGGC GAGCGATGGCTTATT Shewmr7_3223 3816560 - 3818137 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 4874 3818161 - 3818188 + T 100 -13.6 -4.07568 | opp_overlap 3818167, overlap 3818167 GATTAATCCCCTCAC TAAAAAGCCAGC TTAT GCTGGCTTTTTG TTTTAGCGCCAACAA TERM 4875 3818167 - 3818182 + T 100 -10.4 -5.45802 | opp_overlap 3818167, overlap 3818161 TCCCCTCACTAAAAA GCCAGC TTAT GCTGGC TTTTTGTTTTAGCGC TERM 4876 3818182 - 3818167 - T 100 -10.4 -4.72272 | opp_overlap 3818167 3818161 TCCCCTCACTAAAAA GCCAGC TTAT GCTGGC TTTTTGTTTTAGCGC Shewmr7_3224 3818630 - 3818211 - | GCN5-related N-acetyltransferase TERM 4877 3818830 - 3818818 - R 73 -2.6 -5.21683 | overlap 3818826 AGCCAAAAAAATAAA GCAG TGAAG CCGC AGGCCAAATGCCGAT TERM 4878 3818830 - 3818863 + r 100 -13.3 -3.41693 | gap 1, opp_overlap 3818826 3818839, overlap 3818832 3818839 AAAGCAGTGAAGCCG CA-GGCCAAATGCCGA TAA TCAGCATTTGGCCCTG TTCCTTGGTCGTCAA TERM 4879 3818832 - 3818860 + r 100 -16.1 -2.56164 | opp_overlap 3818826 3818839, overlap 3818830 3818839 AGCAGTGAAGCCGCA GGCCAAATGCCGA TAA TCAGCATTTGGCC CTGTTCCTTGGTCGT Shewmr7_3226 3820737 - 3819013 - | single-stranded-DNA-specific exonuclease RecJ TERM 4880 3820799 - 3820781 - R 100 -11 -5.29716 | opp_overlap 3820781 CTAAGATAACAAAAA GGTGAGCC TTA AGCTCACC TTTAATGGGATAAAT TERM 4881 3820781 - 3820799 + r 86 -10.3 -3.74872 | opp_overlap 3820781 CTAAGATAACAAAAA GGTGAGC CTTAA GCTCACC TTTAATGGGATAAAT Shewmr7_3227 3821554 - 3820829 - | thiol:disulfide interchange protein DsbC Shewmr7_3228 3822607 - 3821705 - | tyrosine recombinase XerD TERM 4882 3822626 - 3822648 + r 100 -14.2 -3.38072 | opp_overlap 3822626 AACTCCATAAAAAAA CGGCGTATTC TAA GGATACGCCG TTGATATTAACTCAA TERM 4883 3822648 - 3822626 - R 100 -12 -5.63504 | opp_overlap 3822626 AACTCCATAAAAAAA CGGCGTATTC TAA GGATACGCCG TTGATATTAACTCAA Shewmr7_3229 3824093 - 3822690 - | branched-chain amino acid transport system II carrier protein TERM 4884 3823358 - 3823348 - G 76 -3.2 -5.07523 | overlap 3823352 GACACATAAACAAAA GCAA GAC CTGC CGCCGCAATAAAGGC TERM 4885 3824846 - 3824836 - g 93 -8.2 -5.07486 | GAGTTGGAAGAAAAA GCCG CAG CGGC CTGTAGATACAATAT Shewmr7_3230 3824632 - 3825342 + | methyltransferase small Shewmr7_3231 3826412 - 3825417 - | response regulator receiver modulated metal dependent phosphohydrolase Shewmr7_3232 3829771 - 3826415 - | multi-sensor hybrid histidine kinase TERM 4886 3828104 - 3828083 - G 70 -8.8 -3.61774 | CAGAATATCGCTAAA GCCTATGA TGGCAT TCATAGGC GTGCGGATCTCATGG Shewmr7_3233 3830174 - 3831436 + | ATP-dependent RNA helicase SrmB TERM 4887 3831463 - 3831449 - f 73 -8.5 -3.58329 | opp_overlap 3831449 TAAACACTCCCTAAA GCCGC GTAAT GCGGC TTTTTTATGCTCACT TERM 4888 3831449 - 3831463 + F 100 -9.2 -5.31877 | opp_overlap 3831449 TAAACACTCCCTAAA GCCGCG TAA TGCGGC TTTTTTATGCTCACT TERM 4889 3832088 - 3832076 - g 83 -9.1 -4.3255 | CGCTCAATGAAGAAA TCGCC CGT GGCGA AGTCGCTAAAATCGA Shewmr7_3234 3831691 - 3832908 + | RND family efflux transporter MFP subunit TERM 4890 3834217 - 3834201 - g 71 -5.1 -4.56597 | opp_overlap 3834215 CGCGGTGCGCAAAAA GTGGC CATGCCC GCCAC CTTCGGGGTGTTAAC TERM 4891 3835480 - 3835450 - g 71 -6.8 -4.17023 | CCAAGTATCCGAAAA TCCAAACCACCCTC GAT GGTGGCAGTTTGGA TGAACAGAATGCTAT Shewmr7_3235 3832908 - 3836111 + | acriflavin resistance protein TERM 4892 3836136 - 3836163 + F 100 -14.4 -2.87211 | opp_overlap 3836142, overlap 3836142 CACAAAGTCACCCCA TAAAAAGAGAGC CTAG GCTCTCTTTTTA TGTCTGGCCCCCACT TERM 4893 3836142 - 3836157 + F 100 -9 -5.03994 | opp_overlap 3836142, overlap 3836136 GTCACCCCATAAAAA GAGAGC CTAG GCTCTC TTTTTATGTCTGGCC TERM 4894 3836157 - 3836142 - f 100 -9 -4.85599 | opp_overlap 3836136 3836142 GTCACCCCATAAAAA GAGAGC CTAG GCTCTC TTTTTATGTCTGGCC Shewmr7_3236 3836260 - 3836985 + | radical SAM domain-containing protein Shewmr7_3237 3837119 - 3839353 + | putative PAS/PAC sensor protein Shewmr7_3238 3840734 - 3839337 - | hypothetical protein Shewmr7_3239 3841349 - 3840819 - | hypothetical protein Shewmr7_3240 3842085 - 3841342 - | lysine decarboxylase transcriptional regulator, CadC TERM 4895 3842326 - 3842313 - H 71 -6.7 -4.09551 | overlap 3842301 AAATGCCACAAATAA TGTGC GCAG GCACA CATTGAAATCGAGCA TERM 4896 3843044 - 3843029 - g 76 -4.6 -5.03145 | opp_overlap 3843040 3843043, overlap 3843030 CAACCGCTGAAAAAA CCGCCC TCGT AGGCAG CTCATCGAAGGCGAT TERM 4897 3843044 - 3843063 + G 73 -12.2 -2.53449 | opp_overlap 3843030, overlap 3843043 3843040 CCGCCCTCGTAGGCA GCTCATCG AAGG CGATGAGC GTATTGTGCCACTCT Shewmr7_3241 3842527 - 3843351 + | cytochrome c, putative Shewmr7_3242 3843362 - 3843883 + | hypothetical protein TERM 4898 3843910 - 3843927 + T 100 -11.3 -4.4727 | opp_overlap 3843910 TCGCGCCCAAAAAAA GGCATCC GATT GGATGCC TTTTCTACGTCTTAA TERM 4899 3843927 - 3843910 - T 100 -11.3 -5.40072 | opp_overlap 3843910 TCGCGCCCAAAAAAA GGCATCC GATT GGATGCC TTTTCTACGTCTTAA Shewmr7_3243 3844496 - 3843948 - | hypothetical protein Shewmr7_3244 3845238 - 3844489 - | response regulator receiver protein Shewmr7_3245 3846874 - 3845405 - | Na+/H+ antiporter TERM 4900 3846335 - 3846371 + g 79 -12.2 -3.28712 | overlap 3846340 ACCAGCGCCCACTTT CATCACCACGGCGCAC ATCAA GAGCGCCGTGGTTAAG TTATCGGCCACCGGC TERM 4901 3846340 - 3846366 + g 90 -15.1 -3.23274 | overlap 3846335 CGCCCACTTTCATCA CCACGGCGCAC ATCAA GAGCGCCGTGG TTAAGTTATCGGCCA TERM 4902 3847101 - 3847061 - R 100 -10.8 -4.63184 | gap 1, opp_overlap 3847068 3847075, overlap 3847063 3847064 3847068 3847075 AAGTTAGTCCAAAAA CAGCCAATAAAAAAGCACC TCTC GGTGCTTTTTTATTGA-TA TCAATCACATTGATT TERM 4903 3847100 - 3847063 - R 100 -13.7 -3.92746 | opp_overlap 3847068 3847075, overlap 3847061 3847064 3847068 3847075 GTTAGTCCAAAAACA GCCAATAAAAAAGCACC TCTC GGTGCTTTTTTATTGAT ATCAATCACATTGAT TERM 4904 3847099 - 3847064 - R 100 -17.2 -2.95166 | opp_overlap 3847068 3847075, overlap 3847063 3847061 3847068 3847075 TTAGTCCAAAAACAG CCAATAAAAAAGCACC TCTC GGTGCTTTTTTATTGA TATCAATCACATTGA TERM 4905 3847068 - 3847095 + r 100 -14.4 -3.2794 | opp_overlap 3847064 3847063 3847061 3847068 3847075, overlap 3847075 TCCAAAAACAGCCAA TAAAAAAGCACC TCTC GGTGCTTTTTTA TTGATATCAATCACA TERM 4906 3847095 - 3847068 - R 100 -14.4 -3.32832 | opp_overlap 3847068 3847075, overlap 3847064 3847063 3847061 3847075 TCCAAAAACAGCCAA TAAAAAAGCACC TCTC GGTGCTTTTTTA TTGATATCAATCACA TERM 4907 3847088 - 3847075 - R 100 -8.1 -5.49234 | opp_overlap 3847068 3847075, overlap 3847068 3847064 3847063 3847061 ACAGCCAATAAAAAA GCACC TCTC GGTGC TTTTTTATTGATATC TERM 4908 3847075 - 3847088 + r 100 -8.1 -5.5353 | opp_overlap 3847075 3847068 3847064 3847063 3847061, overlap 3847068 ACAGCCAATAAAAAA GCACC TCTC GGTGC TTTTTTATTGATATC Shewmr7_3246 3847852 - 3847115 - | hypothetical protein TERM 4909 3847968 - 3847951 - R 100 -9.8 -5.24129 | opp_overlap 3847951 TTTTTGCATAAAAAA GCCCGC ACTTTG GCGGGC TTTTTAGAACAGTAT TERM 4910 3847951 - 3847968 + r 100 -9.8 -4.57837 | opp_overlap 3847951 TTTTTGCATAAAAAA GCCCGC ACTTTG GCGGGC TTTTTAGAACAGTAT Shewmr7_3247 3849058 - 3847991 - | fructose-1,6-bisphosphate aldolase TERM 4911 3848516 - 3848530 + g 72 -10 -3.34043 | overlap 3848509 3848508 ATGAGTGTCGGCAAC GAAGCG TGC CGCTTC TTCTGGGCTGGTCAG TERM 4912 3849246 - 3849205 - R 95 -13.1 -3.14881 | gap 1, opp_overlap 3849239 TAATTTTTTTATCAA GTTTTAGTGCCATCGCAGCA CCC TGCCGCGATGGCGC-AATAC CTAACTCAGTGTTAG pgk 3850433 - 3849258 - | phosphoglycerate kinase Shewmr7_3249 3851583 - 3850567 - | erythrose 4-phosphate dehydrogenase TERM 4913 3851624 - 3851651 + r 76 -9.8 -3.33261 | opp_overlap 3851626, overlap 3851625 TACTGCATATACAAA AACGGCCTGCAA ACGA TTGCAGGCCGCA TTATACAGATTAACC TERM 4914 3851625 - 3851650 + r 93 -13.3 -2.59742 | opp_overlap 3851626, overlap 3851624 ACTGCATATACAAAA ACGGCCTGCAA ACGA TTGCAGGCCGC ATTATACAGATTAAC TERM 4915 3851649 - 3851626 - R 100 -16.8 -5.03994 | opp_overlap 3851625 3851624 CTGCATATACAAAAA CGGCCTGCAA ACGA TTGCAGGCCG CATTATACAGATTAA Shewmr7_3250 3853706 - 3851712 - | transketolase TERM 4916 3853401 - 3853417 + g 79 -6.5 -4.71061 | overlap 3853402 TGGGGTGTAACCGTA TTCTGGG TGA CCCGGAG TTTTTGAATGTAACT Shewmr7_3251 3854183 - 3855334 + | S-adenosylmethionine synthetase TERM 4917 3855360 - 3855389 + F 72 -10.1 -2.75307 | opp_overlap 3855368, overlap 3855368 GCTCATGCTTTCGCA AGAAAAAACCGCC TAAG GGCGGTTTTTTTA TGCTTAGGATGTATT TERM 4918 3855381 - 3855368 - f 100 -9.5 -5.4505 | opp_overlap 3855360 3855368 TTTCGCAAGAAAAAA CCGCC TAAG GGCGG TTTTTTTATGCTTAG TERM 4919 3855368 - 3855381 + F 100 -9.5 -5.71983 | opp_overlap 3855368, overlap 3855360 TTTCGCAAGAAAAAA CCGCC TAAG GGCGG TTTTTTTATGCTTAG Shewmr7_3252 3855464 - 3855913 + | hypothetical protein Shewmr7_3253 3856261 - 3855920 - | hypothetical protein TERM 4920 3856230 - 3856246 + g 70 -10.9 -2.93348 | overlap 3856225 3856243 ACATTGGCGTATGTC GTCAGCA GGG TGCTGAC TATGGTATTAGTCAC Shewmr7_3254 3858269 - 3856254 - | diguanylate phosphodiesterase Shewmr7_3255 3858935 - 3858393 - | acetyltransferase TERM 4921 3858906 - 3858895 - G 80 -3 -5.3671 | AATACAACTAAAAAA TCAA TATC TTGA GTCGTAGCTGGGCGT Shewmr7_3256 3859109 - 3860122 + | GGDEF domain-containing protein Shewmr7_3257 3860369 - 3860136 - | hypothetical protein Shewmr7_3258 3860440 - 3860856 + | protein of unknown function DUF306, Meta and HslJ TERM 4922 3860868 - 3860902 + T 100 -20.4 -3.06796 | opp_overlap 3860871 3860878, overlap 3860871 3860878 ATAAGCTCGCTTCGA TAATAAAAAACCGCCA ACT TGGCGGTTTTTTATTA TTCAATGGACTAGCC TERM 4923 3860871 - 3860899 + T 100 -17.7 -3.68073 | opp_overlap 3860871 3860878, overlap 3860868 3860878 AGCTCGCTTCGATAA TAAAAAACCGCCA ACT TGGCGGTTTTTTA TTATTCAATGGACTA TERM 4924 3860899 - 3860871 - T 100 -17.7 -3.28791 | opp_overlap 3860871 3860868 3860878, overlap 3860878 AGCTCGCTTCGATAA TAAAAAACCGCCA ACT TGGCGGTTTTTTA TTATTCAATGGACTA TERM 4925 3860878 - 3860892 + T 100 -11.4 -5.64873 | opp_overlap 3860871 3860878, overlap 3860871 3860868 TTCGATAATAAAAAA CCGCCA ACT TGGCGG TTTTTTATTATTCAA TERM 4926 3860892 - 3860878 - T 100 -11.4 -5.55769 | opp_overlap 3860878 3860871 3860868, overlap 3860871 TTCGATAATAAAAAA CCGCCA ACT TGGCGG TTTTTTATTATTCAA Shewmr7_3259 3862234 - 3860912 - | sodium:dicarboxylate symporter Shewmr7_3260 3862692 - 3862396 - | hypothetical protein Shewmr7_3261 3862912 - 3863355 + | GCN5-related N-acetyltransferase TERM 4927 3863363 - 3863383 + T 100 -12.6 -3.51232 | opp_overlap 3863363, overlap 3863359 AGAAGTAATAAAAAA GGATCGGG CATAA CCCGATCC TTCATTTCAAACGGC TERM 4928 3863383 - 3863363 - T 100 -13.3 -5.57396 | opp_overlap 3863363 3863359 AGAAGTAATAAAAAA GGATCGGGC ATA ACCCGATCC TTCATTTCAAACGGC TERM 4929 3863450 - 3863436 - T 70 -7.1 -3.88438 | GCAGACCAAACAGAA TGGCG GTCAT CGCCA GTAAGCCCGCAATAA Shewmr7_3262 3864705 - 3863413 - | amino acid transporter, transmembrane TERM 4930 3864103 - 3864085 - G 76 -6.6 -4.57073 | opp_overlap 3864072, overlap 3864086 TACTGTGCCTAAAAA GGCGCCAG TTT CTGGCACG ACTTGCAGCGCATCC TERM 4931 3864102 - 3864086 - G 70 -10.1 -3.33922 | opp_overlap 3864072, overlap 3864085 ACTGTGCCTAAAAAG GCGCCAG TTT CTGGCAC GACTTGCAGCGCATC TERM 4932 3865114 - 3865097 - R 100 -12.7 -5.24129 | opp_overlap 3865095 CCGCCTCATAAAAAA GGCCCAC CTAA GTGGGCC AATTAATCAAACAAA Shewmr7_3263 3867708 - 3865141 - | peptidase S45, penicillin amidase TERM 4933 3865641 - 3865613 - G 71 -5.9 -4.28774 | GCATCTAAGGCAAAA CCTGCGGCTTCAA GAT TCAAGGCCGCATG GGCAAGCGCCACTAA TERM 4934 3867907 - 3867885 - H 71 -4 -4.89567 | overlap 3867886 3867887 3867889 TGGCAAAATAGAAAA CCCAGAGGCG AGA CACCTCCGAC CATTTAAGCAATGAT Shewmr7_3264 3867965 - 3868504 + | NTPase Shewmr7_3265 3868611 - 3869591 + | MarR family transcriptional regulator TERM 4935 3869618 - 3869634 + T 77 -3.5 -5.1861 | opp_overlap 3869619, overlap 3869619 TATTTGCAGCAGTTA AGGCGCG CTA CGCCCCC TTTTTTGGTAATACA TERM 4936 3869852 - 3869831 - T 70 -9.5 -2.75993 | overlap 3869830 TTATGCAGAGATAAT GTAGTCAGC AGCA ACTGACTAC GAATGATTTGGCGTA Shewmr7_3266 3871002 - 3869809 - | beta-lactamase TERM 4937 3871189 - 3871237 + r 93 -11.1 -4.19238 | opp_overlap 3871194, overlap 3871194 AAAAGCCCTATAAAC AAAAATCGCGTTAGACTCAGCTG TAC TAGCTCTGCCTAACGCGATTTTC TTTTCCACTTACCGC TERM 4938 3871194 - 3871232 + r 100 -11 -5.10163 | opp_overlap 3871194, overlap 3871189 CCCTATAAACAAAAA TCGCGTTAGACTCAGCTG TAC TAGCTCTGCCTAACGCGA TTTTCTTTTCCACTT TERM 4939 3871232 - 3871194 - R 100 -12.5 -5.38054 | opp_overlap 3871194 3871189 CCCTATAAACAAAAA TCGCGTTAGACTCAGCT GTACT AGCTCTGCCTAACGCGA TTTTCTTTTCCACTT Shewmr7_3267 3872470 - 3871253 - | Na(+)-translocating NADH-quinone reductase subunit F Shewmr7_3268 3873130 - 3872522 - | Na(+)-translocating NADH-quinone reductase subunit E Shewmr7_3269 3873760 - 3873140 - | Na(+)-translocating NADH-quinone reductase subunit D Shewmr7_3270 3874551 - 3873757 - | Na(+)-translocating NADH-quinone reductase subunit C Shewmr7_3271 3875773 - 3874541 - | Na(+)-translocating NADH-quinone reductase subunit B TERM 4940 3875740 - 3875752 + g 80 -4.8 -5.20154 | opp_overlap 3875731 GCAAATCAGGGGCGT CCTG TAAAT CAGG TTTTTTAGGTTGTGT Shewmr7_3272 3877143 - 3875773 - | Na(+)-translocating NADH-quinone reductase subunit A TERM 4941 3878204 - 3878191 - g 73 -5.9 -4.58283 | CAACTGGCGGAAAAA CACGG TCTG CCGCG CATTGTGACAGTGCA Shewmr7_3273 3877609 - 3878649 + | aldo/keto reductase TERM 4942 3878789 - 3878830 + G 73 -3.2 -4.96848 | gap 2, opp_overlap 3878781, overlap 3878794 GAAACAGGCGATTGT CCATATCGCACTTGTCGTAA GAGA TTACGATGAG-GCGAT-TGA TTTTTATGTCAAGAA TERM 4943 3878794 - 3878826 + G 72 -8.6 -3.91281 | gap 1, opp_overlap 3878781, overlap 3878789 AGGCGATTGTCCATA TCGCACTTGTCGTAA GAGA TTACGATGAG-GCGA TTGATTTTTATGTCA TERM 4944 3878923 - 3878894 - g 70 -8.5 -3.71552 | gap 1 ACCCGAGCAAGATAA GCGTTGGGTCGTGG TAG CCCCG-CCCAACTC CAGTGGTACCGCCTT Shewmr7_3274 3878772 - 3879194 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 4945 3879323 - 3879342 + T 100 -13.6 -5.13741 | opp_overlap 3879323 AATAAAAACCAAAAA GCGAAGCC ATTT GGCTTCGC TTTTTATTCACTTAA TERM 4946 3879342 - 3879323 - T 100 -13.6 -5.24003 | opp_overlap 3879323 AATAAAAACCAAAAA GCGAAGCC ATTT GGCTTCGC TTTTTATTCACTTAA Shewmr7_3275 3880804 - 3879365 - | ATP-dependent RNA helicase DbpA TERM 4947 3881158 - 3881141 - R 100 -12.7 -5.06414 | opp_overlap 3881141 CTGCGCTAACAAAAA GCCCTGC ATTG GCAGGGC TTAGTGGGTGTAACT TERM 4948 3881141 - 3881158 + r 93 -12.7 -3.2056 | opp_overlap 3881141 CTGCGCTAACAAAAA GCCCTGC ATTG GCAGGGC TTAGTGGGTGTAACT Shewmr7_3276 3882120 - 3881263 - | pirin domain-containing protein Shewmr7_3277 3883036 - 3882605 - | hypothetical protein Shewmr7_3278 3883609 - 3883157 - | hypothetical protein TERM 4949 3883577 - 3883590 + g 74 -2.5 -5.07053 | GTGTCCCGTTAATTC TAATT GATC AATTA TTTTTTCGGCTACTT Shewmr7_3279 3884140 - 3883700 - | hypothetical protein TERM 4950 3883726 - 3883757 + g 70 -4.6 -4.67755 | gap 1, opp_overlap 3883734, overlap 3883727 3883728 ATCGTTTTTTAAAGG TTTCATAATCTTTGC CCG GCAAAGA-TATGACG TTTTTAACTAAATAT TERM 4951 3883750 - 3883734 - G 70 -9.5 -3.32294 | opp_overlap 3883728 3883727 3883726 TTAAAGGTTTCATAA TCTTTGC CCG GCAAAGA TATGACGTTTTTAAC TERM 4952 3884607 - 3884629 + r 79 -7.6 -4.27062 | AGTCCTCCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTGATTTTGATTAA Shewmr7_3280 3885011 - 3884811 - | hypothetical protein TERM 4953 3884909 - 3884922 + g 72 -3.8 -4.86731 | AGTCGGTGCATTCTA CGGT TTCGAT ACCG TTTTCTTTAAACAGC Shewmr7_3281 3885403 - 3887316 + | ABC transporter related Shewmr7_3282 3887352 - 3887813 + | hypothetical protein Shewmr7_3283 3888240 - 3887830 - | glutathione-dependent formaldehyde-activating, GFA Shewmr7_3284 3889854 - 3888253 - | glucose-methanol-choline oxidoreductase Shewmr7_3285 3890407 - 3889901 - | hypothetical protein Shewmr7_3286 3890519 - 3891502 + | alpha/beta hydrolase fold Shewmr7_3287 3891512 - 3891757 + | hypothetical protein TERM 4954 3891775 - 3891795 + F 77 -8.4 -3.92075 | ACCAGTATCCCTGTG CCGTATAA ATAGC TTATACGG TTTATCGCTCCCAAT TERM 4955 3892727 - 3892701 - g 70 -2.9 -4.75174 | gap 1, overlap 3892702 GATTTAATGGAAAAA CGCCAGC-AGCT TAAC AGCCCGCAGGCA AACTGAGATAGAGTT Shewmr7_3288 3891846 - 3892733 + | phosphoribulokinase TERM 4956 3892750 - 3892768 + T 75 -6 -4.58395 | ATAGAGTTAAGATGT GGCTTAAT CAA ATAAAGCC TTTTTGAGCAATAGA Shewmr7_3289 3893743 - 3893231 - | GCN5-related N-acetyltransferase TERM 4957 3893856 - 3893869 + r 85 -9.5 -4.18018 | opp_overlap 3893856 TTAGGCAATAAAAAA CCGCC CGAA GGCGG TTTTAAATCAAAAAA TERM 4958 3893869 - 3893856 - R 100 -9.5 -5.4833 | opp_overlap 3893856 TTAGGCAATAAAAAA CCGCC CGAA GGCGG TTTTAAATCAAAAAA TERM 4959 3893902 - 3893885 - R 76 -2.5 -5.37593 | TTTTAAATCAAAAAA GCGAGCC GACT GGCGAGC TGCAGTCGCAAAGGC Shewmr7_3290 3895214 - 3893922 - | aminopeptidase B TERM 4960 3895340 - 3895364 + H 70 -9.9 -2.55213 | CAGTTTACTGCCAGC GGCCGAGGACT GAA AGCCATCGGCC TAAGTTACCTAGGTA Shewmr7_3291 3895446 - 3896150 + | sugar fermentation stimulation protein TERM 4961 3896645 - 3896618 - g 74 -4.1 -5.03747 | opp_overlap 3896618, overlap 3896608 3896607 AAACCCTTCAAAAAA TCGAAGAAGAC GATTTT GGCTTCTGCGA TTCTTGCGGTATCGA Shewmr7_3292 3896314 - 3896757 + | TraR/DksA family transcriptional regulator TERM 4962 3896771 - 3896788 + F 100 -14.1 -3.07135 | opp_overlap 3896748, overlap 3896768 AATCGGCCATCTTCG GGCGGGG ATTT CCCCGCC TACTTGTTTATGCGC TERM 4963 3897281 - 3897264 - g 70 -11.3 -2.52676 | opp_overlap 3897267 CATGGGCGGAATTTA CGATGGC CGCT GCCATCG GTTAGCCACACCGCA TERM 4964 3897383 - 3897398 + G 70 -3.2 -4.77165 | overlap 3897384 TCGTAGTGGACCAAG CCTTCG CCGC CGAAGA TTTTATTATCAAACG Shewmr7_3293 3896893 - 3897792 + | glutamyl-tRNA synthetase, class Ic TERM 4965 3898359 - 3898339 - g 79 -12.6 -3.06796 | CGCGATGTGATTGAA GTGGCCAC CTTCC GTGGCCAC CATGGCGACAGCAAT Shewmr7_3294 3898075 - 3899382 + | poly(A) polymerase Shewmr7_3295 3899382 - 3899870 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Shewmr7_3296 3899927 - 3900721 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 4966 3901380 - 3901367 - g 83 -5.2 -5.17744 | overlap 3901368 3901369 ACAGAGGAAGAAAAA GCCG CCGCGC CGGC GTTGAAAAAAGCCAT TERM 4967 3901407 - 3901391 - g 86 -6.5 -5.00616 | overlap 3901395 CCGGCGTTGAAAAAA GCCATCG ATG CTATGGC GCAAGGCATCAAACA Shewmr7_3297 3900773 - 3901618 + | pantothenate synthetase TERM 4968 3901640 - 3901653 + F 100 -8.1 -5.72622 | opp_overlap 3901640 TAAGCATGAGAAAAA GGAGC TTAG GCTCC TTTTTTGTTTGTGCG TERM 4969 3901653 - 3901640 - f 95 -8.1 -4.94902 | opp_overlap 3901640 TAAGCATGAGAAAAA GGAGC TTAG GCTCC TTTTTTGTTTGTGCG Shewmr7_3298 3901908 - 3902435 + | hypothetical protein Shewmr7_3299 3902933 - 3903352 + | curlin-associated protein TERM 4970 3903417 - 3903399 - g 74 -2.4 -5.13521 | opp_overlap 3903406 AAACTAGCTAAAAAA TCACTTAT CGC ATTAGCGA TTGTAGCGGGTATCA TERM 4971 3904490 - 3904512 + G 73 -6.2 -4.45544 | opp_overlap 3904489 3904490 CACAACGACTCAAAC GGGCGACTTA AAC TTAGTCGACC TTTTAGTTGATGGCG Shewmr7_3300 3903381 - 3904736 + | curlin-associated protein TERM 4972 3904765 - 3904787 + T 100 -10.6 -4.47183 | opp_overlap 3904765 3904768 CATACATGCTCATAA GAGGGAGTCT AAT GGACTCCTTC TTTATTTCCCTGATC TERM 4973 3905784 - 3905798 + T 74 -10 -3.14931 | opp_overlap 3905773 GAAACGCCGTGAAGT GTCGTC ATC GACGAC TTAATGACGAGTAGG Shewmr7_3302 3906642 - 3905977 - | LuxR family transcriptional regulator Shewmr7_3303 3907627 - 3907019 - | hypothetical protein Shewmr7_3304 3907783 - 3909012 + | D-3-phosphoglycerate dehydrogenase TERM 4974 3909022 - 3909036 + F 71 -8.6 -3.51934 | overlap 3909020 TTCTAAGGCTTTACG CACTCA GCT TGAGTG TATTTATAAGGCGCA TERM 4975 3909040 - 3909081 + F 93 -11 -4.08064 | opp_overlap 3909046, overlap 3909043 3909046 TCAGCTTGAGTGTAT TTATAAGGCGCACATTTC ATTCAA GATATGTGCGCCTTATGC TTTTGAGCGCCGCTT TERM 4976 3909043 - 3909078 + F 100 -14.9 -3.08032 | opp_overlap 3909046, overlap 3909040 3909046 GCTTGAGTGTATTTA TAAGGCGCACATTTC ATTCAA GATATGTGCGCCTTA TGCTTTTGAGCGCCG TERM 4977 3909046 - 3909075 + F 93 -12.2 -3.68359 | opp_overlap 3909046, overlap 3909043 3909040 TGAGTGTATTTATAA GGCGCACATTTC ATTCAA GATATGTGCGCC TTATGCTTTTGAGCG TERM 4978 3909075 - 3909046 - f 89 -12.2 -3.36327 | opp_overlap 3909046 3909043 3909040 TGAGTGTATTTATAA GGCGCACATTTC ATTCAA GATATGTGCGCC TTATGCTTTTGAGCG Shewmr7_3305 3909150 - 3910106 + | glycine cleavage T protein (aminomethyl transferase) TERM 4979 3910141 - 3910165 + T 100 -12.9 -5.27779 | opp_overlap 3910146, overlap 3910146 TAAGAGTTTGAGTTG AAAAAGGCGCC TTA GGCGCCTTTTC TTTTTTAATGTTCAA TERM 4980 3910146 - 3910160 + T 100 -12.8 -5.45813 | opp_overlap 3910146, overlap 3910141 GTTTGAGTTGAAAAA GGCGCC TTA GGCGCC TTTTCTTTTTTAATG TERM 4981 3910160 - 3910146 - T 100 -12.8 -4.62069 | opp_overlap 3910146 3910141 GTTTGAGTTGAAAAA GGCGCC TTA GGCGCC TTTTCTTTTTTAATG Shewmr7_3306 3911186 - 3910170 - | response regulator receiver modulated metal dependent phosphohydrolase Shewmr7_3307 3916554 - 3911251 - | multi-sensor hybrid histidine kinase Shewmr7_3308 3918041 - 3916683 - | amino acid carrier protein TERM 4982 3918162 - 3918127 - H 70 -5.3 -4.44046 | overlap 3918160 GCCAGCCTAAAGAAA GACTATCACCCAGCC AATAAA GGCAGGGAAAGAGTC CAAAAGACAAACGAC TERM 4983 3918247 - 3918232 - H 71 -9 -3.28924 | GAGCGTTTCGCAGAA TGCGTC CATC GACGCA CCTACTTTCGCCTTC Shewmr7_3309 3918694 - 3919365 + | ABC transporter related TERM 4984 3919476 - 3919499 + G 83 -8.8 -4.43309 | gap 1, overlap 3919477 TCGCCCACTATCGCC ACGCG-CCGCT GCA AGCGGGCGCGA TTTTGCTTGGCCTTG TERM 4985 3919477 - 3919498 + G 79 -12.3 -3.25262 | gap 1, overlap 3919476 CGCCCACTATCGCCA CGCG-CCGCT GCA AGCGGGCGCG ATTTTGCTTGGCCTT TERM 4986 3921225 - 3921204 - g 76 -6.5 -4.48299 | opp_overlap 3921203 3921200, overlap 3921186 3921194 GCACACTCAAAGAAA GCTTGCCGG ATCT CTGGCAAAC CTACTTTGAAGGGCG Shewmr7_3310 3919370 - 3922033 + | hypothetical protein Shewmr7_3311 3922030 - 3923280 + | hypothetical protein TERM 4987 3923842 - 3923829 - g 72 -9.5 -3.40899 | AAGCCTTGATTACAA GGGCG TGCG CGCCC CCGCAACCCATTGCT Shewmr7_3312 3923497 - 3923868 + | methylation site containing protein Shewmr7_3313 3923870 - 3924304 + | methylation site containing protein Shewmr7_3314 3924304 - 3924702 + | prepilin-type cleavage/methylation-like protein Shewmr7_3315 3924705 - 3925247 + | prepilin-type cleavage/methylation-like protein Shewmr7_3316 3925263 - 3926888 + | hypothetical protein TERM 4988 3926920 - 3926941 + F 80 -8.7 -4.05026 | AAGTCACCCGCCGAC TCCCTCTCC AAAG GGATAGGGA TTGTTTAAATTTCAA TERM 4989 3927017 - 3927035 + F 70 -3.9 -4.8667 | gap 1, opp_overlap 3927013 CCCCGCCAATACCTC TTGTGAGG TATA CC-CACAA TTTTTATCAGGTCTA Shewmr7_3317 3927129 - 3927413 + | NapD family protein TERM 4990 3927936 - 3927964 + G 72 -8.2 -3.93583 | gap 1 TCGACCCTAACGCCC GCCACTGTATGGC ATCG GCCGTA-GGTGGC TTTATGCGTACCTTC TERM 4991 3929305 - 3929285 - g 78 -6.1 -4.87665 | overlap 3929302 3929303 TTCTATCTACAAAAA GGCATTTTC GAA GAATACGCC GCCTTCGGTCGCGGC TERM 4992 3929766 - 3929756 - g 76 -8.2 -4.17132 | opp_overlap 3929752 3929756 3929757, overlap 3929744 3929757 AAAGGCCGTAACAAA CCGC CAC GCGG TGTGGTGTTTATGCC Shewmr7_3318 3927410 - 3929890 + | nitrate reductase napG 3929942 - 3930676 + | quinol dehydrogenase periplasmic component TERM 4993 3930733 - 3930715 - g 74 -6.6 -4.30416 | overlap 3930717 ACCATGAACTCAAAA GCCCGCAT GCA AGGCGAGC ATGCCGCAGCCATTG napH 3930673 - 3931656 + | quinol dehydrogenase membrane component Shewmr7_3321 3931653 - 3932084 + | periplasmic nitrate reductase subunit NapB TERM 4994 3932109 - 3932128 + T 100 -9.3 -5.45802 | opp_overlap 3932109 TCCCTGCCCACAAAA GCCACTG CTAACC CAGTGGC TTTTTATTTTCCGCA TERM 4995 3932128 - 3932109 - T 88 -9.3 -4.36914 | opp_overlap 3932109 TCCCTGCCCACAAAA GCCACTG CTAACC CAGTGGC TTTTTATTTTCCGCA TERM 4996 3932324 - 3932349 + T 72 -6.1 -4.27914 | opp_overlap 3932329, overlap 3932316 3932329 AAACGATTAAAAAGT AAAAACCCAGC CTAG GCTGGGTTTAC TTGTTGTTTTGCTTT TERM 4997 3932329 - 3932344 + T 91 -10.4 -4.18711 | opp_overlap 3932329, overlap 3932324 3932316 ATTAAAAAGTAAAAA CCCAGC CTAG GCTGGG TTTACTTGTTGTTTT TERM 4998 3932344 - 3932329 - T 100 -10.4 -5.1971 | opp_overlap 3932329 3932324 3932316 ATTAAAAAGTAAAAA CCCAGC CTAG GCTGGG TTTACTTGTTGTTTT Shewmr7_3322 3932487 - 3932335 - | hypothetical protein Shewmr7_3323 3932582 - 3933469 + | LysR family transcriptional regulator TERM 4999 3933549 - 3933575 + T 100 -13.1 -4.36903 | gap 1, opp_overlap 3933549 TCACCCATAAAAAAA CCGCTGCT-AGC CTAG GCTTAGCAGCGG TTTCTATTTGGTAAA TERM 5000 3933575 - 3933549 - T 100 -13.1 -5.64274 | gap 1, opp_overlap 3933549 TCACCCATAAAAAAA CCGCTGCT-AGC CTAG GCTTAGCAGCGG TTTCTATTTGGTAAA Shewmr7_3324 3935692 - 3933599 - | elongation factor G TERM 5001 3936160 - 3936148 - R 70 -7.7 -3.60098 | ATTTGCCACTTTAAA GGTGA GTT TCACC GACACAAATCTGGTC Shewmr7_3325 3937591 - 3936143 - | diguanylate cyclase TERM 5002 3937757 - 3937738 - R 100 -13.6 -5.63504 | opp_overlap 3937738 AATCGGATAAAAAAA TACCCGCC AATT GGCGGGTA TTTCGATGCACTCAT TERM 5003 3937738 - 3937757 + r 100 -13.6 -3.6608 | opp_overlap 3937738 AATCGGATAAAAAAA TACCCGCC AATT GGCGGGTA TTTCGATGCACTCAT Shewmr7_3326 3942339 - 3937786 - | carbamoyl-phosphate synthase L chain, ATP-binding protein TERM 5004 3940983 - 3940998 + g 91 -5.4 -5.39755 | gap 1, opp_overlap 3940981 3940983 AACCGATGTTAAATA GCAGCGC CTT GCG-TGC TTTTTTGTAGTTCTC TERM 5005 3941549 - 3941534 - G 71 -7.6 -4.04206 | TCACCTGGAGAGAAA TCGATG ATGC CATCGA TACAACCCGCGGTAT Shewmr7_3327 3942462 - 3943373 + | LysR family transcriptional regulator TERM 5006 3943466 - 3943485 + T 74 -5 -4.81249 | opp_overlap 3943459 3943466 TGAGATAACAAAAAA GCCTAG CGAATTTA CTAGGC TTTTTGCGTTTAGGA TERM 5007 3943485 - 3943466 - T 95 -5.7 -5.60689 | opp_overlap 3943466, overlap 3943459 TGAGATAACAAAAAA GCCTAGC GAATTT ACTAGGC TTTTTGCGTTTAGGA Shewmr7_3328 3944467 - 3943670 - | Beta-lactamase TERM 5008 3944527 - 3944505 - H 82 -4.9 -5.33866 | gap 1, opp_overlap 3944520, overlap 3944507 3944520 TAAATCCATAAAAAA GA-GGCGCTA AGAG TAGCACCGTC TTGACGGGCTTTCCC TERM 5009 3944524 - 3944507 - H 79 -7.7 -4.28383 | opp_overlap 3944520, overlap 3944505 3944520 AATCCATAAAAAAGA GGCGCTA AGAG TAGCACC GTCTTGACGGGCTTT Shewmr7_3329 3944817 - 3945974 + | hypothetical protein Shewmr7_3330 3946155 - 3946760 + | hypothetical protein TERM 5010 3946859 - 3946845 - f 84 -11.4 -3.18945 | overlap 3946843 3946841 TTCAGGCATAAGAGA CGAGCC ACA GGCTCG CGTAGTACAGATTAC Shewmr7_3331 3946890 - 3947663 + | deoxyribonuclease I Shewmr7_3332 3947672 - 3948403 + | hypothetical protein TERM 5011 3948446 - 3948420 - f 73 -8.6 -3.66666 | opp_overlap 3948418, overlap 3948421 TCTAAAATGGTTAAA CGCCAGCGGGTA ACA CACTGGCTGGCG AATCGATTACTGGCT Shewmr7_3333 3948512 - 3949459 + | glutathione synthetase TERM 5012 3949511 - 3949495 - f 84 -11.5 -3.08642 | opp_overlap 3949490 3949489 ATATTATTCATTGAA GGCGCCC ACA GAGCGCC TACGACTTCTAGGGA TERM 5013 3950255 - 3950235 - g 74 -4.7 -4.7497 | GCGATTGATGAAAAA GATGCTAAA AAA CTCAGCACC TTGACTCAAAAAGCC Shewmr7_3334 3949533 - 3950927 + | alkaline phosphatase TERM 5014 3950975 - 3950949 - f 91 -7.2 -5.28176 | GCTATTTACAAAAAA TAGCCCAAGCGA ATA TCGCGCCGGCTA ACAGATAAAAGGCAA TERM 5015 3951014 - 3950981 - f 100 -13.3 -3.06696 | opp_overlap 3950986, overlap 3950986 GCGCCGGCTAACAGA TAAAAGGCAACCGTG TTAA CACAGTTGCCTTTTT TATTGGCTTTCATTC TERM 5016 3950986 - 3951009 + F 100 -11 -5.52096 | opp_overlap 3950986 3950981 GGCTAACAGATAAAA GGCAACCGTG TTAA CACAGTTGCC TTTTTTATTGGCTTT TERM 5017 3951009 - 3950986 - f 100 -13.2 -4.67943 | opp_overlap 3950986, overlap 3950981 GGCTAACAGATAAAA GGCAACCGTG TTAA CACAGTTGCC TTTTTTATTGGCTTT TERM 5018 3951897 - 3951848 - g 73 -12 -2.5655 | overlap 3951847 TGTATTGATATCAAT GCCATGGCGCTGGCCTCCTGCG AACTTA CGCTGGCGGCAAACGGCATGAC GGCCAAGGTCTATCC Shewmr7_3335 3951113 - 3952174 + | 16S rRNA m(2)G 1207 methyltransferase Shewmr7_3336 3952520 - 3952852 + | hypothetical protein TERM 5019 3954281 - 3954254 - T 100 -14.8 -2.65264 | TGATTAGCGAGACGA CCGTCCGCCCCA TGGA TGGGGCGGTCGA GCATCCAAGGATGGA TERM 5020 3954474 - 3954426 - T 100 -17 -4.46112 | opp_overlap 3954443, overlap 3954428 3954443 TTTTACCTAAACAAA TTGCACCCAATAAAAAACCAGC ACTAG GCTGGTTTTTTATTGGAAGCGA ATCCTACGCAAATGT TERM 5021 3954472 - 3954428 - T 100 -19.6 -2.55829 | opp_overlap 3954443, overlap 3954426 3954443 TTACCTAAACAAATT GCACCCAATAAAAAACCAGC ACTAG GCTGGTTTTTTATTGGAAGC GAATCCTACGCAAAT TERM 5022 3954457 - 3954443 - T 95 -7.1 -5.4833 | opp_overlap 3954443, overlap 3954428 3954426 GCACCCAATAAAAAA CCAGC ACTAG GCTGG TTTTTTATTGGAAGC TERM 5023 3954443 - 3954457 + T 95 -7.1 -5.4505 | opp_overlap 3954428 3954426 3954443 GCACCCAATAAAAAA CCAGC ACTAG GCTGG TTTTTTATTGGAAGC Shewmr7_3337 3955748 - 3954489 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 5024 3955301 - 3955277 - G 70 -2.7 -4.84359 | overlap 3955279 3955297 CCATGTCCATAAAAA TATGGGCGCCC TTT AAGCGACCATC GACACGGGCCTTGAT Shewmr7_3338 3956012 - 3955761 - | BolA family protein Shewmr7_3339 3956313 - 3956029 - | SpoIIAA family protein Shewmr7_3340 3956972 - 3956319 - | toluene tolerance family protein TERM 5025 3956592 - 3956606 + g 70 -2.1 -4.91873 | gap 1, overlap 3956592 3956593 GCTGAAATCACTACC G-GGAG AAAA CTCCAC TTTTTGGTTAGTGTA Shewmr7_3341 3957457 - 3956984 - | hypothetical protein Shewmr7_3342 3958297 - 3957512 - | hypothetical protein Shewmr7_3343 3959112 - 3958294 - | ABC transporter related TERM 5026 3958395 - 3958414 + g 70 -8.6 -3.68351 | gap 1, overlap 3958397 GAATAAACTGTTTGA GC-TGCGGA TTA TCCGCATGC TTTAGCTCCTCAGGC Shewmr7_3344 3959672 - 3960649 + | KpsF/GutQ family protein Shewmr7_3345 3960649 - 3961200 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Shewmr7_3346 3961197 - 3961757 + | hypothetical protein Shewmr7_3347 3961744 - 3962295 + | OstA family protein Shewmr7_3348 3962292 - 3963023 + | ABC transporter related TERM 5027 3964035 - 3964019 - g 78 -3.5 -5.10461 | GGTATCGAAGAAAAA CGGCCGC TGG GTGGTCG AATTAAACCCTGACT Shewmr7_3349 3963129 - 3964604 + | RNA polymerase factor sigma-54 Shewmr7_3350 3964633 - 3964920 + | SSU ribosomal protein S30P / sigma 54 modulation protein Shewmr7_3351 3964923 - 3965366 + | PTS IIA-like nitrogen-regulatory protein PtsN Shewmr7_3352 3965363 - 3966217 + | hypothetical protein Shewmr7_3353 3966204 - 3966479 + | HPr family phosphocarrier protein Shewmr7_3354 3966726 - 3968090 + | magnesium transporter TERM 5028 3968149 - 3968120 - T 100 -15.9 -3.38604 | opp_overlap 3968126, overlap 3968126 TACTAAAACGAGCAA CAAAAATGGCGCC ATAG GGCGCCATTTTTA ATAGATCGATTAGCA TERM 5029 3968143 - 3968126 - T 100 -12.7 -5.16071 | opp_overlap 3968126, overlap 3968120 AACGAGCAACAAAAA TGGCGCC ATAG GGCGCCA TTTTTAATAGATCGA TERM 5030 3968126 - 3968143 + T 100 -12.7 -4.7497 | opp_overlap 3968126 3968120 AACGAGCAACAAAAA TGGCGCC ATAG GGCGCCA TTTTTAATAGATCGA Shewmr7_3355 3968992 - 3968165 - | hypothetical protein TERM 5031 3968550 - 3968560 + g 76 -8.2 -4.19506 | opp_overlap 3968544 CAAGCATAATCCCCC GCGG GAT CCGC TTTTGGCGTTGACGT TERM 5032 3969195 - 3969220 + r 72 -6.1 -4.40572 | opp_overlap 3969200, overlap 3969198 3969200 GCGAGTGCAGAGAGT AAAAAGTCGCC CGTA GGCGACTCTTA TTTTATGGAAATTAT TERM 5033 3969198 - 3969217 + r 79 -7.8 -4.31397 | opp_overlap 3969200, overlap 3969195 3969200 AGTGCAGAGAGTAAA AAGTCGCC CGTA GGCGACTC TTATTTTATGGAAAT TERM 5034 3969215 - 3969200 - R 100 -10.4 -4.84527 | opp_overlap 3969198 3969195 3969200 TGCAGAGAGTAAAAA GTCGCC CGTA GGCGAC TCTTATTTTATGGAA TERM 5035 3969200 - 3969215 + r 86 -10.4 -3.75581 | opp_overlap 3969200, overlap 3969198 3969195 TGCAGAGAGTAAAAA GTCGCC CGTA GGCGAC TCTTATTTTATGGAA Shewmr7_3356 3969924 - 3969232 - | OmpA/MotB domain-containing protein TERM 5036 3970174 - 3970141 - H 72 -6.1 -4.36262 | gap 1, opp_overlap 3970150 3970151 3970165 3970166, overlap 3970144 3970152 ACATTTAGAGTAAAA GCACTGAAATAGTGCA AGC TGCACCGTTTCAG-AC ATGACTTAAAAAAGT TERM 5037 3970172 - 3970144 - H 79 -11.1 -3.16202 | opp_overlap 3970150 3970151 3970165 3970166, overlap 3970141 3970152 TTTAGAGTAAAAGCA CTGAAATAGTGCA AGC TGCACCGTTTCAG ACATGACTTAAAAAA Shewmr7_3357 3970580 - 3970813 + | transposase IS3/IS911 family protein TERM 5038 3971519 - 3971503 - T 87 -5.1 -5.4756 | opp_overlap 3971503 3971501, overlap 3971491 3971490 AATCCCAATAAAAAA GACGC TCATAAG GCGTC TATTTTATTGAAGAA Shewmr7_3358 3972399 - 3971542 - | protein of unknown function RIO1 Shewmr7_3359 3973011 - 3972670 - | hypothetical protein Shewmr7_3360 3973212 - 3973760 + | hypothetical protein TERM 5039 3973827 - 3973809 - T 75 -8.8 -3.7282 | opp_overlap 3973809 TGACTTGAGGAATAA GCCATCAC TTA GAGATGGC TTCTTTAGTATTGAT TERM 5040 3973809 - 3973827 + T 83 -8.8 -4.09455 | opp_overlap 3973809 TGACTTGAGGAATAA GCCATCAC TTA GAGATGGC TTCTTTAGTATTGAT Shewmr7_3361 3974583 - 3973813 - | hypothetical protein TERM 5041 3973976 - 3973966 - G 76 -6.8 -4.58663 | overlap 3973967 ATCATGGCTCAAAAA GTGG GCA CCAC GCAGCTCCTGCGCAA TERM 5042 3974424 - 3974408 - G 80 -12.3 -3.37344 | TTCTCAGTCAACCAA TGGCCAC GCA GTGGCCA AGAATCGACACCACC TERM 5043 3975762 - 3975790 + G 80 -9.7 -3.97947 | gap 1, opp_overlap 3975761 3975760 3975757 3975756, overlap 3975762 ATCAGATAATCAACT G-CTGCAATGCC CCCTTT GGCATTGCAGAC TTTGTGATCACTACG TERM 5044 3975882 - 3975872 - g 87 -8.2 -4.82901 | overlap 3975874 GTTTTGCTACAAAAA GCGG GCG CCGC CATGACCATCAGCAA Shewmr7_3362 3974789 - 3976723 + | diguanylate cyclase/phosphodiesterase with GAF sensor TERM 5045 3976838 - 3976813 - T 100 -14.7 -5.8187 | opp_overlap 3976813 TAGGCAATAAAAAAA GCCCCCGTAAC CTAA GTTGCGGGGGC TTTGCTATGAGGGGT TERM 5046 3976813 - 3976838 + T 100 -16.9 -3.83205 | opp_overlap 3976813 TAGGCAATAAAAAAA GCCCCCGTAAC CTAA GTTGCGGGGGC TTTGCTATGAGGGGT nrfA 3978295 - 3976874 - | cytochrome c nitrite reductase TERM 5047 3978439 - 3978453 + H 73 -5.8 -4.50976 | opp_overlap 3978447 CTTTTATGTTTTTGT TAATGT AAT ACATTA TTTTCTAATGTAAAA Shewmr7_3364 3978521 - 3980317 + | nitrate/nitrite sensor protein NarQ Shewmr7_3365 3980310 - 3980939 + | two component LuxR family transcriptional regulator TERM 5048 3981006 - 3980975 - T 100 -17.6 -4.67234 | opp_overlap 3980978 3980982, overlap 3980982 ACGCAAGGTTAAAAA TAACAAAGGCAATC AATA GATTGCCTTTGTTA TATCGAGATTAAAAG TERM 5049 3980978 - 3981003 + T 100 -14.9 -3.50447 | opp_overlap 3980975 3980982, overlap 3980982 CAAGGTTAAAAATAA CAAAGGCAATC AATA GATTGCCTTTG TTATATCGAGATTAA TERM 5050 3980999 - 3980982 - T 100 -9.9 -4.76802 | opp_overlap 3980978 3980982, overlap 3980975 GTTAAAAATAACAAA GGCAATC AATA GATTGCC TTTGTTATATCGAGA TERM 5051 3980982 - 3980999 + T 93 -9.9 -4.38927 | opp_overlap 3980982 3980975, overlap 3980978 GTTAAAAATAACAAA GGCAATC AATA GATTGCC TTTGTTATATCGAGA Shewmr7_3366 3981403 - 3981029 - | hypothetical protein Shewmr7_3367 3981572 - 3982549 + | Mg2 transporter protein, CorA family protein TERM 5052 3982559 - 3982588 + T 100 -12.3 -4.14392 | opp_overlap 3982564, overlap 3982564 TTGTAGACTGGAATA AAAAACGCCAATC TTAT GATTGGCGTTTTG TTTTAACCATTGCCG TERM 5053 3982583 - 3982564 - T 100 -12.2 -5.46657 | opp_overlap 3982559 3982564 GACTGGAATAAAAAA CGCCAATC TTAT GATTGGCG TTTTGTTTTAACCAT TERM 5054 3982564 - 3982583 + T 100 -12.2 -5.08255 | opp_overlap 3982564, overlap 3982559 GACTGGAATAAAAAA CGCCAATC TTAT GATTGGCG TTTTGTTTTAACCAT Shewmr7_3368 3983719 - 3982604 - | succinylglutamate desuccinylase/aspartoacylase TERM 5055 3983154 - 3983141 - G 76 -4.5 -4.92314 | overlap 3983142 AGGAATCGAGAAAAA CTGCG CCGC CGCAA GGTCATATTCAGGGC Shewmr7_3369 3985076 - 3983721 - | aspartate kinase III TERM 5056 3984478 - 3984499 + g 75 -9.4 -3.87075 | opp_overlap 3984471 GCAGAATAGTCGCTA CCGCCACG ACCAAG CGTGGTGG TTTGTCCGGCCTCAT Shewmr7_3370 3986070 - 3985636 - | hypothetical protein TERM 5057 3986443 - 3986424 - H 85 -2.2 -5.79526 | opp_overlap 3986427, overlap 3986427 ACATTTTAAAAAAAA CAATAGTT AAGG AACTATTT ATAACTATTGCTTAT TERM 5058 3986440 - 3986427 - H 73 -3.9 -4.96028 | opp_overlap 3986427, overlap 3986424 TTTTAAAAAAAACAA TAGTT AAGG AACTA TTTATAACTATTGCT TERM 5059 3986836 - 3986799 - g 76 -2.9 -5.13722 | gap 1, overlap 3986800 3986803 TGCAGGAAAACAAAA TTAACCTAGT-GGTTA TGGACAT TAACCTACCAGGTAAA AACGGTCTGTTGTTG Shewmr7_3371 3986657 - 3987373 + | two-component response regulator TERM 5060 3987403 - 3987420 + T 100 -9.9 -5.76633 | opp_overlap 3987403 TTGAATAATAAAAAA CCAGATC CTCG GATCTGG TTTTTTTATCTCTGC TERM 5061 3987420 - 3987403 - T 100 -9.9 -5.64873 | opp_overlap 3987403 TTGAATAATAAAAAA CCAGATC CTCG GATCTGG TTTTTTTATCTCTGC TERM 5062 3987627 - 3987648 + T 79 -10.9 -3.05463 | opp_overlap 3987627, overlap 3987629 ACCGAGTATAAAAAA GAGTGAGGT GTTA GCCTCACTC TTGGATAACGGCAAT TERM 5063 3987648 - 3987627 - T 100 -10.2 -5.31877 | opp_overlap 3987627 3987629 ACCGAGTATAAAAAA GAGTGAGG TGTTAG CCTCACTC TTGGATAACGGCAAT Shewmr7_3372 3989984 - 3987693 - | dipeptidyl-peptidase IV Shewmr7_3373 3990281 - 3991273 + | fructose-1,6-bisphosphatase TERM 5064 3991335 - 3991308 - f 81 -11.4 -2.87344 | opp_overlap 3991313, overlap 3991313 GATTTTTTTTACAGA TAAAAGCCACTG ACCA CAGTGGCTTTTT TGTTGTCGCGGAATG TERM 5065 3991330 - 3991313 - f 100 -11.3 -4.60797 | opp_overlap 3991313, overlap 3991308 TTTTTACAGATAAAA GCCACTG ACCA CAGTGGC TTTTTTGTTGTCGCG TERM 5066 3991313 - 3991330 + F 100 -11.3 -5.55769 | opp_overlap 3991313 3991308 TTTTTACAGATAAAA GCCACTG ACCA CAGTGGC TTTTTTGTTGTCGCG TERM 5067 3991339 - 3991355 + F 80 -8.7 -3.96452 | CAGTGGCTTTTTTGT TGTCGCG GAA TGCGACA TTTGAGTTTTGATTG TERM 5068 3991735 - 3991770 + F 77 -6.2 -4.63218 | gap 1, overlap 3991740 ATGCATGTCCCATCT TTGTAGCTACGCAGACA TCC TGTCTGCGTCACT-CGA TTTTCTTCAACGCCC TERM 5069 3991740 - 3991766 + F 70 -9.4 -2.84841 | overlap 3991735 TGTCCCATCTTTGTA GCTACGCAGACA TCC TGTCTGCGTCAC TCGATTTTCTTCAAC TERM 5070 3991876 - 3991892 + F 80 -3.7 -5.26155 | opp_overlap 3991877, overlap 3991877 TCCTATCTTTGACCA ACGTTAA CCT TTAACGA TTTTTATCTTTATCT TERM 5071 3992760 - 3992746 - g 82 -3.5 -5.31456 | GCAACCCACAAAAAA CAGCA CGCTT CGCTG TAAACATTGCGGAGA Shewmr7_3374 3991973 - 3992962 + | NERD domain-containing protein TERM 5072 3993272 - 3993244 - g 82 -3.9 -5.28176 | opp_overlap 3993250 TCGATTGATAAAAAA GCCTTTTTCATTC ATT GAATTTAAAAAGC CAAGATATAAAGATT Shewmr7_3375 3992990 - 3993943 + | hypothetical protein TERM 5073 3994036 - 3994025 - f 75 -5.8 -4.63218 | opp_overlap 3994029 3994033, overlap 3994026 3994027 GGGCGTTGAAGAAAA TCGC GTGA GCGA GGCATGGATGCCTCG TERM 5074 3994029 - 3994056 + F 91 -12 -3.5525 | opp_overlap 3994025 3994027 3994026, overlap 3994033 GTTGAAGAAAATCGC GTGAGCGAGGCA TGGA TGCCTCGCTAGC TTTCGGACACTCTGT TERM 5075 3994033 - 3994052 + F 93 -13.6 -2.64274 | opp_overlap 3994025 3994027 3994026, overlap 3994029 AAGAAAATCGCGTGA GCGAGGCA TGGA TGCCTCGC TAGCTTTCGGACACT TERM 5076 3994209 - 3994231 + F 74 -7.6 -3.91911 | ATCCCCTCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTGATTCACCTCGG Shewmr7_3376 3994481 - 3994969 + | hypothetical protein TERM 5077 3995066 - 3995098 + F 95 -8 -5.00616 | gap 1, opp_overlap 3995066 3995071 3995074, overlap 3995074 CCGAGTGCCAAAGAT TAAAACAAGCCACTG ATAG TAGTGGCTT-TTTTA TTTTTTGCACAAAAA TERM 5078 3995094 - 3995071 - f 70 -5.3 -4.49756 | opp_overlap 3995066 3995074, overlap 3995066 3995074 TGCCAAAGATTAAAA CAAGCCACT GATAGT AGTGGCTTT TTTATTTTTTGCACA TERM 5079 3995074 - 3995091 + F 100 -7.7 -6.04324 | opp_overlap 3995074 3995071 3995066, overlap 3995066 CAAAGATTAAAACAA GCCACTG ATAG TAGTGGC TTTTTTATTTTTTGC TERM 5080 3995091 - 3995074 - f 74 -7 -4.34993 | opp_overlap 3995066 3995074, overlap 3995071 3995066 CAAAGATTAAAACAA GCCACT GATAGT AGTGGC TTTTTTATTTTTTGC Shewmr7_3377 3995378 - 3995848 + | hypothetical protein TERM 5081 3995866 - 3995883 + T 100 -11.3 -5.32944 | opp_overlap 3995866 CAATGATATAAAAAA GCCACTG TAAT CAGTGGC TTTTTTAGTTGTGCG TERM 5082 3995883 - 3995866 - T 100 -11.3 -5.42131 | opp_overlap 3995866 CAATGATATAAAAAA GCCACTG TAAT CAGTGGC TTTTTTAGTTGTGCG Shewmr7_3378 3997151 - 3995901 - | sodium:dicarboxylate symporter Shewmr7_3379 3998414 - 3997506 - | hypothetical protein Shewmr7_3380 3999622 - 3998402 - | hypothetical protein Shewmr7_3381 4000330 - 3999665 - | hypothetical protein TERM 5083 4000154 - 4000124 - G 72 -3.8 -4.88388 | overlap 4000128 4000129 ATAACCGCAGAAAAA CACATCGCCCTCGG CGG CCGAAGCCACGGTG CGATTGATTTGGTTC Shewmr7_3382 4004001 - 4000330 - | hypothetical protein TERM 5084 4001860 - 4001871 + g 78 -5.8 -4.87626 | overlap 4001852 TTCCATCCGCGCTTC GAGC GCCT GCTC TTTTTGCTCTTCGAG Shewmr7_3383 4005699 - 4004665 - | LacI family transcription regulator TERM 5085 4008189 - 4008158 - g 86 -8 -4.65747 | gap 1, opp_overlap 4008162 CAACGCCCAACAAAA CCTGGGGCAAGGC CATTGAT GCCC-GCCCCAAG GCCATGAGCCCCTAC Shewmr7_3384 4005859 - 4008216 + | putative alpha-1,2-mannosidase TERM 5086 4008664 - 4008683 + G 71 -11.4 -2.82234 | overlap 4008655 4008663 GGCACCGGTTGCCTT GGCGCCTC GGGC GAGGTGCC TGTGCTGCCATTTCT Shewmr7_3385 4008241 - 4010760 + | putative alpha-1,2-mannosidase TERM 5087 4011083 - 4011126 + G 93 -13.3 -3.9712 | gap 2, overlap 4011085 GCCTGCTGTTTTACC CCGCGTCCAGCATGGAACAGT ATGC GCTGTTCC-TGCTGG-CGCTG TTTGTGCTGGCCTCG TERM 5088 4011085 - 4011124 + G 89 -14.5 -3.57674 | gap 2, overlap 4011083 CTGCTGTTTTACCCC GCGTCCAGCATGGAACAGT ATGC GCTGTTCC-TGCTGG-CGC TGTTTGTGCTGGCCT TERM 5089 4011491 - 4011513 + G 70 -4.9 -4.7373 | gap 2 TATTCCTTTACGTTG GC-GCCGA-AG TAT CTATCGGCAGC TTTTTGGTGAACTAC Shewmr7_3386 4010764 - 4012002 + | glucose/galactose transporter TERM 5090 4012210 - 4012192 - g 71 -10.3 -3.03661 | opp_overlap 4012165, overlap 4012184 4012191 TAGGCAACGACAAAT TCGGCGA CTTTC TCGCCGA GGCGCTGGCCCGTTA Shewmr7_3387 4012002 - 4013009 + | ribokinase-like domain-containing protein TERM 5091 4014058 - 4014069 + G 70 -4.4 -4.73613 | CGCCCTGTGGGACTA TGCT TGGC AGCA TTTTGTTGATCATAA Shewmr7_3388 4013045 - 4014214 + | N-acylglucosamine 2-epimerase TERM 5092 4014245 - 4014260 + T 100 -11.8 -4.63184 | TTTCCCTCTACCCTT GCCGCC CGTG GGCGGC TTTTTGAAGTGCCTT TERM 5093 4014549 - 4014527 - T 79 -8.4 -4.14472 | overlap 4014539 TTAATACCGTCAAAA GCAGCATGAA ACG TTCACGCAGC CAGCGGCTTGAGTGA Shewmr7_3389 4015705 - 4014752 - | fimbrial protein Shewmr7_3390 4016588 - 4015809 - | diguanylate phosphodiesterase TERM 5094 4017208 - 4017222 + r 76 -10 -3.29511 | opp_overlap 4017207 4017204 AATATTTAAAATATG CCGTGT TAG ACACGG TTATAAACAAATAGC Shewmr7_3391 4019802 - 4017223 - | fimbrial biogenesis outer membrane usher protein TERM 5095 4018565 - 4018541 - G 74 -11.5 -3.07629 | ACATCAAATGAGATA GCACCAAGCTT GCC AAGATTGGTGC CAAGACCTGCCGCAA TERM 5096 4019645 - 4019633 - G 71 -6.3 -4.39828 | opp_overlap 4019633, overlap 4019623 AATATCTGGACAAAA TACCT ACC AGGTA TTTGTCCGTCAATAT Shewmr7_3392 4020582 - 4019836 - | pili assembly chaperone TERM 5097 4020140 - 4020160 + g 70 -8.3 -3.72588 | AACTTTATTTTTGTT TTCACGGCA ATT TGCAGTGAA TTTAACTCTGACTTA TERM 5098 4020586 - 4020558 - G 77 -9.8 -3.71527 | gap 1, opp_overlap 4020552, overlap 4020559 TCTCAACCATGTAAA TGTTATTGGCTGC CGAT GCAGCCAATAA-A CGTAAATATCAGTTA TERM 5099 4020586 - 4020559 - G 71 -11.4 -2.82595 | opp_overlap 4020552, overlap 4020558 CTCAACCATGTAAAT GTTATTGGCTGC CGAT GCAGCCAATAAA CGTAAATATCAGTTA Shewmr7_3393 4021125 - 4020595 - | fimbrial protein Shewmr7_3394 4022784 - 4023716 + | hypothetical protein TERM 5100 4024607 - 4024570 - g 71 -7.9 -3.9777 | gap 1, opp_overlap 4024575, overlap 4024575 4024579 TGCAACATGGACAAA CTACAGCAATTCGATGCG TGG CGCATTGAACTGCT-TAA ATCTATACCAGCCAA TERM 5101 4024603 - 4024575 - g 79 -12.5 -3.06711 | opp_overlap 4024575, overlap 4024570 4024579 CATGGACAAACTACA GCAATTCGATGCG TGG CGCATTGAACTGC TTAAATCTATACCAG TERM 5102 4024575 - 4024603 + G 79 -12.5 -3.15999 | opp_overlap 4024575 4024570 4024579 CATGGACAAACTACA GCAATTCGATGCG TGG CGCATTGAACTGC TTAAATCTATACCAG Shewmr7_3395 4024435 - 4024806 + | hypothetical protein TERM 5103 4025973 - 4025938 - g 71 -6.1 -4.32402 | overlap 4025941 CGCGAATTAAAACAA GGACAGGCGAAGGAA GGCAAA TTCCCTCGCGTGCAC AAAAATGGTCAAGAG Shewmr7_3397 4025674 - 4026972 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Shewmr7_3398 4027829 - 4027128 - | hypothetical protein TERM 5104 4028070 - 4028056 - H 100 -8.6 -5.4505 | opp_overlap 4028058 GTTTGCAAGAAAAAA GACAAG CAC CTTGTC GATTCGGAGAACCTA Shewmr7_3399 4028086 - 4030269 + | TonB-dependent receptor TERM 5105 4030314 - 4030282 - T 100 -14.3 -4.08692 | opp_overlap 4030289, overlap 4030286 TAATCCCTCGTAAAA CTAACAAGGGCAAAC CCA GTTTGCCCTTGTAAA TCATCTGTCTGCAAT TERM 5106 4030310 - 4030286 - T 100 -17.3 -3.66908 | opp_overlap 4030289, overlap 4030282 CCCTCGTAAAACTAA CAAGGGCAAAC CCA GTTTGCCCTTG TAAATCATCTGTCTG TERM 5107 4030289 - 4030307 + T 100 -13.2 -3.39036 | opp_overlap 4030286 4030282 TCGTAAAACTAACAA GGGCAAAC CCA GTTTGCCC TTGTAAATCATCTGT Shewmr7_3400 4030568 - 4030338 - | hypothetical protein Shewmr7_3401 4031097 - 4030687 - | hypothetical protein Shewmr7_3402 4032210 - 4031680 - | hypothetical protein Shewmr7_3403 4032980 - 4032753 - | hypothetical protein TERM 5108 4032803 - 4032840 + g 76 -6.4 -4.63089 | gap 2, overlap 4032805 4032806 AAAAATCTAACGAGT TTTGCT-CAACGG-TGCG GTCA CGCATCCGTTGTAGCGTA TTGTTTTTTGAGGTG TERM 5109 4032805 - 4032838 + g 75 -9 -3.91465 | gap 2, overlap 4032803 4032806 AAATCTAACGAGTTT TGCT-CAACGG-TGCG GTCA CGCATCCGTTGTAGCG TATTGTTTTTTGAGG TERM 5110 4032806 - 4032837 + g 70 -10.3 -2.93795 | gap 2, overlap 4032805 4032803 AATCTAACGAGTTTT GCT-CAACGG-TGCG GTCA CGCATCCGTTGTAGC GTATTGTTTTTTGAG TERM 5111 4033233 - 4033244 + r 73 -7.2 -4.09511 | opp_overlap 4033233 CACCATCTGGAAAAA CGCG CATG CGCG TTTTGAAAACCTATT TERM 5112 4033244 - 4033233 - R 81 -7.2 -4.60487 | opp_overlap 4033233 CACCATCTGGAAAAA CGCG CATG CGCG TTTTGAAAACCTATT Shewmr7_3404 4034083 - 4033646 - | hypothetical protein Shewmr7_3405 4034533 - 4034255 - | PpiC-type peptidyl-prolyl cis-trans isomerase Shewmr7_3406 4036905 - 4034611 - | penicillin-binding protein 1B TERM 5113 4036059 - 4036077 + g 71 -6.6 -4.19177 | opp_overlap 4036053 GTGAAGCCAGCCCCA TCCCATGC ACG GCGCGGGA TTTATCTTGCCCCAT Shewmr7_3407 4039490 - 4036983 - | ATP-dependent helicase HrpB TERM 5114 4039643 - 4039605 - R 76 -6.6 -4.56597 | overlap 4039610 TTGGCTTGCTAAAAA TAGCATCGCCCCGACAGC AAG ACTCTCGGGGCGCCAATA GTACAAATAAGCCGA TERM 5115 4039638 - 4039610 - R 79 -10.9 -3.01831 | overlap 4039605 TTGCTAAAAATAGCA TCGCCCCGACAGC AAG ACTCTCGGGGCGC CAATAGTACAAATAA Shewmr7_3408 4041666 - 4039660 - | TonB-dependent copper receptor Shewmr7_3409 4044058 - 4041872 - | diguanylate cyclase/phosphodiesterase TERM 5116 4042744 - 4042728 - G 79 -13.7 -2.73875 | overlap 4042725 4042691 4042730 TCCTTGGCAAGACGA CAGGCCG CAT CGGCCTG ACTCATCACAGTGTA TERM 5117 4042742 - 4042730 - G 70 -10.5 -2.9155 | overlap 4042728 4042725 4042691 CTTGGCAAGACGACA GGCCG CAT CGGCC TGACTCATCACAGTG TERM 5118 4043957 - 4043926 - G 70 -9.4 -3.57406 | opp_overlap 4043955, overlap 4043924 4043927 CCGTCAGCACAAATA CGCCATCACAATGC AACT GCAGCGTGATGGCC TCTAGGGCTTGATCA TERM 5119 4043956 - 4043927 - G 77 -12.9 -2.74122 | opp_overlap 4043955, overlap 4043926 4043924 CGTCAGCACAAATAC GCCATCACAATGC AACT GCAGCGTGATGGC CTCTAGGGCTTGATC Shewmr7_3410 4044229 - 4044801 + | 2'-5' RNA ligase TERM 5120 4044895 - 4044866 - T 100 -13.7 -4.94222 | gap 1, overlap 4044868 4044869 AATAATCCATAAAAA CATTCAGCCCGAGC ATG GCTCGGGCTGA-TA ACAAGACAAGCAAAC TERM 5121 4044894 - 4044868 - T 100 -16.6 -4.07789 | overlap 4044866 4044869 TAATCCATAAAAACA TTCAGCCCGAGC ATG GCTCGGGCTGAT AACAAGACAAGCAAA TERM 5122 4044893 - 4044869 - T 100 -20.1 -3.03589 | overlap 4044868 4044866 AATCCATAAAAACAT TCAGCCCGAGC ATG GCTCGGGCTGA TAACAAGACAAGCAA Shewmr7_3411 4045701 - 4044922 - | Sel1 domain-containing protein Shewmr7_3412 4046124 - 4046759 + | cAMP-regulatory protein TERM 5123 4046798 - 4046821 + F 100 -9 -5.4505 | gap 1, opp_overlap 4046797 4046798 CCTGTTTCATTAAAG TGGCCTAGCAT AAA AT-CTAGGCCA TTTTTTATTGGGGAG Shewmr7_3413 4046842 - 4047189 + | hypothetical protein TERM 5124 4047793 - 4047779 - g 73 -3.4 -5.0133 | overlap 4047781 4047789 CACCTGCGTAAAAAA CTCGGC AAA ACCGCG ATTGAAACCCGCCGC Shewmr7_3414 4047170 - 4047844 + | two component transcriptional regulator TERM 5125 4048057 - 4048076 + G 86 -12.1 -3.92542 | CTGTCGAGCTTCTAC CGCCCCG CCTATT CGGGGCG TTATTTCCAGCTAAA TERM 5126 4048179 - 4048164 - g 70 -9 -3.57263 | overlap 4048169 ACCTTTAGCGCCAAA CCAGAC CCGC GTCTGG CAGGCAAAAGGGCCG Shewmr7_3415 4047841 - 4049169 + | periplasmic sensor signal transduction histidine kinase TERM 5127 4049262 - 4049245 - T 100 -11.3 -5.4505 | opp_overlap 4049245 GCCGCCAATAAAAAA CGCCATC GAAC GATGGCG TTTTTTATTGAGATG TERM 5128 4049245 - 4049262 + T 100 -11.3 -5.46657 | opp_overlap 4049245 GCCGCCAATAAAAAA CGCCATC GAAC GATGGCG TTTTTTATTGAGATG Shewmr7_3416 4050103 - 4049300 - | hypothetical protein TERM 5129 4049845 - 4049872 + g 80 -2.6 -5.47159 | TAGGTTGAGTCGCAT CTGGGTGCTCAA AATG TTTAGCTACCAG TTTTTTCTGTTCAAA TERM 5130 4050258 - 4050239 - R 100 -10.8 -4.72272 | opp_overlap 4050243 GCTTGTGATGAAAAA GGAAGAAC CTAG GTTCTTCC TCAATGATGTCACTC Shewmr7_3417 4051731 - 4050268 - | succinylglutamic semialdehyde dehydrogenase Shewmr7_3418 4052760 - 4051741 - | arginine succinyltransferase TERM 5131 4052878 - 4052853 - R 100 -11.3 -5.24129 | gap 1, opp_overlap 4052853 TTCCCTGACAAAAAA GGAGTGC-GAAT AAG ATTCAGCACTCC TTTGGTCGCTTAGGC TERM 5132 4052853 - 4052878 + r 95 -11.3 -3.794 | gap 1, opp_overlap 4052853 TTCCCTGACAAAAAA GGAGTGC-GAAT AAG ATTCAGCACTCC TTTGGTCGCTTAGGC argD 4054105 - 4052888 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein Shewmr7_3420 4055325 - 4054414 - | alpha/beta hydrolase domain-containing protein TERM 5133 4054510 - 4054500 - G 73 -5.4 -4.66953 | opp_overlap 4054500 GGAACAGGGGAAAAA CATG GGG CATG TTGTGATAAAAACGC TERM 5134 4054537 - 4054523 - G 74 -4.2 -4.83169 | overlap 4054524 ATGTTGTGATAAAAA CGCGAT TCT ACCGCA CCACCACAGGCCTTA TERM 5135 4054742 - 4054726 - G 73 -8.7 -3.6715 | overlap 4054729 4054730 CGACTCAATCGTAAA GAACGGA TCG TCCGCTC CTAAAATCAGCTCGG Shewmr7_3421 4056526 - 4055381 - | putative signal transduction protein TERM 5136 4056707 - 4056691 - R 100 -12.3 -5.24796 | opp_overlap 4056691 TCCACACAACAAAAA GGCCTCA TAT TGAGGCC TTCATATTGTCGCGA TERM 5137 4056691 - 4056707 + r 100 -12.3 -3.41745 | opp_overlap 4056691 TCCACACAACAAAAA GGCCTCA TAT TGAGGCC TTCATATTGTCGCGA Shewmr7_3422 4059206 - 4056726 - | peptidase S9 prolyl oligopeptidase TERM 5138 4058613 - 4058626 + g 82 -3.7 -5.27335 | overlap 4058614 CTCTTTCACACCCTC GGGCG CTTT CGCCA TTTTTATTTCAGCCA Shewmr7_3423 4060048 - 4059458 - | aminodeoxychorismate synthase, glutamine amidotransferase subunit TERM 5139 4059576 - 4059603 + g 77 -12 -3.09516 | overlap 4059570 GGCAGCTGCTTATGG CTCATGGCCATG ATTT CGCGGCCATGAG TTGGGTCGTCAAACC TERM 5140 4059645 - 4059635 - G 71 -6.8 -4.22009 | AGCATCCAACACAAA TCCC TCA GGGA CAGCATCGACCAGCA TERM 5141 4060173 - 4060156 - R 100 -11.3 -5.46657 | opp_overlap 4060156 TATGGCAATAAAAAA GCCAGTC GGCA GACTGGC TTTCAATAGTATAGA TERM 5142 4060156 - 4060173 + r 90 -11.3 -3.70149 | opp_overlap 4060156 TATGGCAATAAAAAA GCCAGTC GGCA GACTGGC TTTCAATAGTATAGA Shewmr7_3424 4060642 - 4060205 - | ClpXP protease specificity-enhancing factor sspA 4061271 - 4060642 - | stringent starvation protein A TERM 5143 4061331 - 4061303 - R 100 -19.7 -5.34857 | opp_overlap 4061308 CGAAATAAAACAAAA GTAAACGAGGGGC AAA GCCCCCCGTTTAC ACTATGCGGATACTA TERM 5144 4061308 - 4061326 + r 90 -11.6 -3.63627 | opp_overlap 4061303 TAAAACAAAAGTAAA CGAGGGGC AAA GCCCCCCG TTTACACTATGCGGA Shewmr7_3426 4062066 - 4061368 - | cytochrome c1 Shewmr7_3427 4063280 - 4062066 - | cytochrome b/b6 domain-containing protein Shewmr7_3428 4063870 - 4063280 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 5145 4064198 - 4064218 + r 84 -11.1 -3.64822 | opp_overlap 4064198 CGCAACTAAAAAAAA TGGGCCCTG ATA CAGGACCCA TTTCAATGCAAAACT TERM 5146 4064218 - 4064198 - R 100 -13.3 -5.95166 | opp_overlap 4064198 CGCAACTAAAAAAAA TGGGCCCTG ATA CAGGACCCA TTTCAATGCAAAACT Shewmr7_3429 4065133 - 4064240 - | HflC protein Shewmr7_3430 4066282 - 4065137 - | HflK protein TERM 5147 4066205 - 4066195 - G 70 -3.2 -4.81734 | opp_overlap 4066204, overlap 4066204 AAAGATTACGAAAAA CCTC ATC AAGG TCCGGTGGTCCTTTG Shewmr7_3431 4067626 - 4066319 - | GTP-binding protein, HSR1-related TERM 5148 4066720 - 4066748 + g 79 -11.8 -3.31515 | CAGCAGCATCGATAT CTTCGAGCACGT TTTGT ACCTGCTCGAAG TTATCCGCCATGTTT TERM 5149 4067080 - 4067108 + g 76 -5.3 -4.7497 | opp_overlap 4067086 4067088, overlap 4067088 TCTGCTCACGTTGTT TATCAACACGCTC TAA GCGTTTGTTGATA TTTTTAATGCGTCCC TERM 5150 4067088 - 4067098 + g 74 -6.8 -4.40199 | opp_overlap 4067086 4067088, overlap 4067080 CGTTGTTTATCAACA CGCT CTA AGCG TTTGTTGATATTTTT Shewmr7_3432 4067923 - 4067651 - | RNA-binding protein Hfq Shewmr7_3433 4068906 - 4068016 - | tRNA delta(2)-isopentenylpyrophosphate transferase Shewmr7_3434 4070869 - 4068935 - | DNA mismatch repair protein MutL TERM 5151 4069328 - 4069340 + g 70 -4.7 -4.65722 | opp_overlap 4069314 4069328 GGGCTGACCTATCAA GCCGG TTG CCAGC TTTGTTTCTATCTCA Shewmr7_3435 4072271 - 4070883 - | N-acetylmuramoyl-L-alanine amidase Shewmr7_3436 4072738 - 4072280 - | hypothetical protein TERM 5152 4072806 - 4072778 - R 93 -12.6 -3.10343 | gap 1, opp_overlap 4072778, overlap 4072783 AGATGGAGGAGGCAA CTTAAGCGC-GGA AATG TCCTGCGCTTAAG TTTTACAGCGCCTAG TERM 5153 4072778 - 4072806 + r 100 -12.6 -4.08216 | gap 1, opp_overlap 4072778 4072783 AGATGGAGGAGGCAA CTTAAGCGC-GGA AATG TCCTGCGCTTAAG TTTTACAGCGCCTAG Shewmr7_3437 4074317 - 4072818 - | carbohydrate kinase, YjeF related protein TERM 5154 4074541 - 4074517 - R 100 -12.9 -3.81755 | overlap 4074521 ATCCGGTAAAGACAA CAAAGCCAGCA TTA CGCTGGCTCTG AAAGGTCATTCTGAA TERM 5155 4074537 - 4074521 - R 100 -10.1 -4.52143 | overlap 4074517 GGTAAAGACAACAAA GCCAGCA TTA CGCTGGC TCTGAAAGGTCATTC Shewmr7_3438 4075017 - 4074562 - | hypothetical protein Shewmr7_3439 4076729 - 4076184 - | oligoribonuclease TERM 5156 4076754 - 4076767 + H 84 -3.8 -5.4505 | TTATCATGTCAGTTA GCCT AAATTC AGGC TTTTTTATTCAAGAG TERM 5157 4076831 - 4076817 - H 78 -2.1 -5.56264 | TTCAAACACAAAAAA TCATC TAATT GACGA AGACAAATCAGTGAG TERM 5158 4077299 - 4077275 - g 73 -12.1 -2.65264 | TTACCACCCAGATTA TCGACCGCTAC TTA GTGGCGGCCGA AGACACGGATATTCC Shewmr7_3440 4076842 - 4077906 + | ribosome-associated GTPase Shewmr7_3441 4077995 - 4078873 + | phosphatidylserine decarboxylase TERM 5159 4078933 - 4078958 + G 86 -8.3 -4.66535 | opp_overlap 4078929 ATCGAATTACACTTA GCTGTGCTG ATGTTTGG CGGCACAGC TTTGTTTTCCAAGTT Shewmr7_3442 4078888 - 4079772 + | hypothetical protein TERM 5160 4080072 - 4080062 - g 100 -6.8 -5.62288 | TGAAGAAAACAAAAA GGTC ATC GACC AGGGCTTAAAAGAAG TERM 5161 4080367 - 4080349 - g 73 -8.8 -3.72576 | overlap 4080365 TTTTCTTCGAGCAAA GCCTCGCC ACT AACGAGGC TGAGCTTGCCAGCAG TERM 5162 4081371 - 4081353 - g 79 -6.6 -4.63932 | TATGCCCTAATAAAA CCGCTACC CAT AGTGGCGG CGGGATGGATTTTCT TERM 5163 4082348 - 4082360 + G 77 -10.5 -3.61178 | opp_overlap 4082334, overlap 4082357 ACGGCTCGATCTGAC GCCGG GCA CCGGC TTTGCCATCACTACG Shewmr7_3443 4079841 - 4083044 + | MscS mechanosensitive ion channel Shewmr7_3444 4083060 - 4083782 + | glycerophosphoryl diester phosphodiesterase Shewmr7_3445 4084136 - 4083801 - | hypothetical protein TERM 5164 4083908 - 4083874 - G 83 -13.7 -3.24825 | gap 1, opp_overlap 4083891 4083895, overlap 4083867 4083869 AGCAAGAACATCCAA TGGGATGGCATGGCAA CGAT TTGCCTTGCCA-CCCA AGGCGTAGCTTTAAC Shewmr7_3446 4084227 - 4085162 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein TERM 5165 4085227 - 4085184 - T 93 -13.4 -2.63073 | opp_overlap 4085184 4085190 4085195, overlap 4085190 4085195 CTGCCTTAAGAACAG CAAAAAGAAAAGGCAATCAG CACG CTGATTGCCTTTTGATTTCG TTTTTACTGCAACAA TERM 5166 4085184 - 4085227 + T 100 -11.2 -4.72272 | opp_overlap 4085184 4085190 4085195, overlap 4085190 4085195 CTGCCTTAAGAACAG CAAAAAGAAAAGGCAATCAG CACG CTGATTGCCTTTTGATTTCG TTTTTACTGCAACAA TERM 5167 4085221 - 4085190 - T 100 -13.2 -4.93316 | opp_overlap 4085184 4085190 4085195, overlap 4085184 4085195 TAAGAACAGCAAAAA GAAAAGGCAATCAG CACG CTGATTGCCTTTTG ATTTCGTTTTTACTG TERM 5168 4085190 - 4085221 + T 95 -13.2 -3.20111 | opp_overlap 4085190 4085184 4085195, overlap 4085184 4085195 TAAGAACAGCAAAAA GAAAAGGCAATCAG CACG CTGATTGCCTTTTG ATTTCGTTTTTACTG TERM 5169 4085195 - 4085216 + T 100 -13.1 -4.65819 | opp_overlap 4085190 4085184 4085195, overlap 4085190 4085184 ACAGCAAAAAGAAAA GGCAATCAG CACG CTGATTGCC TTTTGATTTCGTTTT TERM 5170 4085216 - 4085195 - T 100 -13.1 -5.32396 | opp_overlap 4085195 4085190 4085184, overlap 4085190 4085184 ACAGCAAAAAGAAAA GGCAATCAG CACG CTGATTGCC TTTTGATTTCGTTTT Shewmr7_3447 4086821 - 4085247 - | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 5171 4085697 - 4085715 + g 73 -8.8 -3.73775 | TTGCTCACCCGCTCG CGCCGC TTCAATC GCGGCG TTTAGTGCCAATAAA TERM 5172 4086280 - 4086269 - G 86 -5.8 -5.1356 | TGCCACCAATAAAAA GTGC CAGA GCAC TAATGGCAAGCGCGA TERM 5173 4087132 - 4087116 - g 76 -4.3 -5.00138 | opp_overlap 4087129 TAGGCAAATCAAAAA CGCCGTA AGT CAGGGCG ATACTAGCCTTGCTG Shewmr7_3448 4087069 - 4087260 + | BFD/(2Fe-2S)-binding domain-containing protein TERM 5174 4087265 - 4087277 + T 77 -4.8 -4.96848 | opp_overlap 4087265 AAGTCGCTTAACTTA GAGC CTCCA GCTC TTTTTCTGTAAAACA Shewmr7_3449 4088116 - 4087460 - | thiopurine S-methyltransferase TERM 5175 4088022 - 4087996 - G 70 -9.5 -3.25093 | opp_overlap 4087996, overlap 4087994 ACAGGGGAACGAAGA CCTTAGCATCG GCGGG CAATGCCAAGG TTTGCCAATACTTTA Shewmr7_3450 4088562 - 4088224 - | hypothetical protein TERM 5176 4090583 - 4090545 - g 72 -3.8 -4.83169 | overlap 4090547 ACTGCCCTATAAAAA TACTCGCCGCTTTACTCA TAT TGAGCGAAAAGCCGAGCA TTTTTATCCAAGAAA Shewmr7_3451 4088812 - 4090620 + | serine/threonine protein kinase TERM 5177 4090610 - 4090642 + T 81 -11.5 -2.73875 | gap 1, opp_overlap 4090610, overlap 4090607 4090612 GAAATCCAAAAGAAA TAGGCGCATAACGA ATCACC TCGTTA-GCGCCTA TGATGTTGAAAACCA TERM 5178 4090642 - 4090610 - T 100 -12.2 -4.74598 | gap 1, opp_overlap 4090610 4090607 4090612 GAAATCCAAAAGAAA TAGGCGCATAACGAA TCAC CTCGTTA-GCGCCTA TGATGTTGAAAACCA TERM 5179 4090612 - 4090640 + T 73 -9.7 -2.9155 | gap 1, opp_overlap 4090610, overlap 4090610 4090607 AATCCAAAAGAAATA GGCGCATAACGA ATCACC TCGTTA-GCGCC TATGATGTTGAAAAC Shewmr7_3452 4093064 - 4090662 - | hypothetical protein TERM 5180 4093144 - 4093115 - R 86 -9.9 -3.98312 | overlap 4093118 TACACAAAATCTAAA CCACGCGGGGCCA TCAT TGGCCCCGGGCAA ACAATTAATGATGAT TERM 5181 4093141 - 4093118 - R 100 -13.8 -3.02807 | overlap 4093115 ACAAAATCTAAACCA CGCGGGGCCA TCAT TGGCCCCGGG CAAACAATTAATGAT Shewmr7_3453 4096859 - 4093149 - | multi-sensor hybrid histidine kinase TERM 5182 4097056 - 4097039 - R 91 -7.7 -4.86385 | opp_overlap 4097039 ATGCGTAAAAACAAA GGTCCCA CGAG TGAGACC TTTTGTAACAATAAA Shewmr7_3454 4098474 - 4097080 - | PhoH family protein TERM 5183 4099119 - 4099108 - g 76 -5.8 -4.68424 | overlap 4099110 GAACTCACCGAAAAA GACG GCCT CGTC GTCTACCACGGAATC TERM 5184 4099930 - 4099911 - g 70 -4.2 -4.63218 | CCTCGCCGAAGAAAA CAGCTACA AAGA TGTCGCCG TTGCCGCCGAAGCCT Shewmr7_3455 4098877 - 4101783 + | ATP-dependent helicase HepA TERM 5185 4101858 - 4101839 - f 100 -15 -3.77489 | opp_overlap 4101839 AAGCGAATATGCAAA CGCCCAGC AAAT GCTGGGCG TTTTTATTTTATCTT TERM 5186 4101839 - 4101858 + F 100 -15 -5.60556 | opp_overlap 4101839 AAGCGAATATGCAAA CGCCCAGC AAAT GCTGGGCG TTTTTATTTTATCTT TERM 5187 4102443 - 4102455 + G 70 -9.1 -3.60792 | GTAATATCAATGCTG CTGGC TGG GCCAG TTTAAGCCTTACCCC Shewmr7_3456 4102022 - 4103035 + | hypothetical protein Shewmr7_3457 4103906 - 4103100 - | enoyl-CoA hydratase TERM 5188 4104384 - 4104366 - H 80 -4.6 -5.13527 | opp_overlap 4104366, overlap 4104361 AATTAACAAATAAAA TCTATAGG TTA CATATAGA TGTTATAAATCAAAC TERM 5189 4104953 - 4104919 - g 70 -10.7 -3.02144 | gap 1, opp_overlap 4104919 4104921, overlap 4104921 TGACGCCTGCCAAGA GATCGCCAACGTCGCC ATGG GGCG-CGCCGCCGATC TGTTAGCCAAACTTC Shewmr7_3458 4104485 - 4105480 + | response regulator receiver protein Shewmr7_3459 4105499 - 4106473 + | diguanylate cyclase TERM 5190 4106506 - 4106476 - T 100 -15.6 -4.2558 | opp_overlap 4106477 4106483, overlap 4106477 4106483 TAGTGGTTACTAAAA CCAAAAAGCCCATC GAT GATGGGCTTTTTGT TACTGAGATCTCAAT TERM 5191 4106505 - 4106477 - T 100 -19.1 -3.15027 | opp_overlap 4106477 4106483, overlap 4106476 4106483 AGTGGTTACTAAAAC CAAAAAGCCCATC GAT GATGGGCTTTTTG TTACTGAGATCTCAA TERM 5192 4106477 - 4106505 + T 100 -19.1 -3.17763 | opp_overlap 4106476 4106477 4106483, overlap 4106483 AGTGGTTACTAAAAC CAAAAAGCCCATC GAT GATGGGCTTTTTG TTACTGAGATCTCAA TERM 5193 4106483 - 4106499 + T 100 -12.3 -5.1356 | opp_overlap 4106477 4106476 4106483, overlap 4106477 TACTAAAACCAAAAA GCCCATC GAT GATGGGC TTTTTGTTACTGAGA TERM 5194 4106499 - 4106483 - T 100 -12.3 -5.1166 | opp_overlap 4106483 4106477, overlap 4106477 4106476 TACTAAAACCAAAAA GCCCATC GAT GATGGGC TTTTTGTTACTGAGA Shewmr7_3460 4106939 - 4106532 - | hypothetical protein Shewmr7_3461 4107765 - 4106983 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 5195 4107921 - 4107938 + r 70 -5.5 -4.41494 | gap 1, overlap 4107921 AAACCTAGTTTGCGA CC-TGGCG CAC CGCCGCGG TTTTACTTAAGCCTA Shewmr7_3462 4108689 - 4107910 - | ABC-3 protein TERM 5196 4108470 - 4108451 - G 71 -5.6 -4.48823 | overlap 4108452 4108453 AACCAAGCGATAAAA CCCGCCCC CGCA AGGGCGAA TAAGGCCGGCATCCA TERM 5197 4108666 - 4108636 - G 73 -10.5 -3.24747 | gap 1, overlap 4108639 CGTTGAGAGCACTAA GATCCCCGCCGCCA ATGC TGGCAGCAGG-ATC GACATCAGTTCCAGA TERM 5198 4108664 - 4108639 - G 70 -11.1 -2.50988 | overlap 4108636 TGAGAGCACTAAGAT CCCCGCCGCCA ATGC TGGCAGCAGGA TCGACATCAGTTCCA Shewmr7_3463 4109602 - 4108694 - | periplasmic solute binding protein Shewmr7_3464 4110767 - 4109586 - | hypothetical protein TERM 5199 4109651 - 4109667 + g 72 -9.5 -3.41978 | TGAAAACATTGTCGT CTTCGAT TCC ATCGAAG TTAGTTCCCTTCTGA TERM 5200 4110005 - 4110015 + g 79 -6.8 -4.72846 | opp_overlap 4110005 4110004, overlap 4110012 TATACACAAAATCAG CACC ATA GGTG TTTTTACCTGTGTAA TERM 5201 4110626 - 4110604 - G 71 -5.4 -4.54727 | opp_overlap 4110617, overlap 4110598 TCCCCTAAACCAAAA CCTTCGGCGG TTT CGGCCAATGG ACGCTCGGCCGTTTG Shewmr7_3465 4111139 - 4110849 - | hypothetical protein Shewmr7_3466 4111396 - 4111521 + | hypothetical protein Shewmr7_3467 4111951 - 4111622 - | hypothetical protein TERM 5202 4111763 - 4111749 - G 83 -5.6 -5.17353 | ACAGGGATCAAAAAA TGCCGC GTC GAGGCA TCGAAATAACTGTAT Shewmr7_3468 4112173 - 4113825 + | MscS mechanosensitive ion channel TERM 5203 4113880 - 4113850 - T 100 -15.6 -3.79519 | opp_overlap 4113855, overlap 4113855 AACGTGAGCAGTAAA CAAAAGGCGCAATC CTA GATTGCGCCTTTTT CATGATATTCAAACA TERM 5204 4113855 - 4113875 + T 100 -15.5 -4.8083 | opp_overlap 4113850 4113855 GAGCAGTAAACAAAA GGCGCAATC CTA GATTGCGCC TTTTTCATGATATTC TERM 5205 4113875 - 4113855 - T 100 -15.5 -4.95484 | opp_overlap 4113855, overlap 4113850 GAGCAGTAAACAAAA GGCGCAATC CTA GATTGCGCC TTTTTCATGATATTC Shewmr7_3469 4115614 - 4113905 - | formate--tetrahydrofolate ligase TERM 5206 4116671 - 4116660 - g 81 -5.8 -4.91109 | overlap 4116662 4116663 TCGCGAGGATAAAAA CAGC GGTG GCTG CACAGTCACTCACCC Shewmr7_3470 4115855 - 4116745 + | aldo/keto reductase TERM 5207 4116792 - 4116764 - T 100 -16.1 -3.50555 | opp_overlap 4116770, overlap 4116770 TGTAAACAACACCAA CAAAAACGGCGCC TTA GGCGCCGTTTTCA TCATGCTTAAAGCTG TERM 5208 4116786 - 4116770 - T 100 -15.1 -5.19251 | opp_overlap 4116770, overlap 4116764 CAACACCAACAAAAA CGGCGCC TTA GGCGCCG TTTTCATCATGCTTA TERM 5209 4116770 - 4116786 + T 100 -15.1 -4.33105 | opp_overlap 4116770 4116764 CAACACCAACAAAAA CGGCGCC TTA GGCGCCG TTTTCATCATGCTTA Shewmr7_3471 4117662 - 4116799 - | dehydratase TERM 5210 4117939 - 4117929 - H 71 -3.2 -5.02201 | AAAACATTACAAAAA CCCA TAC TAGG ATGAGTTTACGATTC TERM 5211 4118444 - 4118454 + G 70 -8.2 -3.71075 | overlap 4118442 GCTGACCATGCTTAA GCCC AAT GGGC TGTTTTCGCTGATGT TERM 5212 4118495 - 4118481 - g 87 -10 -4.30987 | opp_overlap 4118479 ATGTTTTACAATAAA GAAGCG ATG CGCTTC CATGCGTTAGTGTCG TERM 5213 4118717 - 4118676 - g 78 -3.7 -5.06451 | gap 1, overlap 4118681 GACTATTTGAAAAAA CACCAGCCTGCGGATTTTGA CTA TCAAAAGCTGCTGAC-GATG GAGCTCGAATATTCC Shewmr7_3472 4118025 - 4118813 + | methyltransferase type 11 TERM 5214 4118861 - 4118815 - T 91 -13.3 -2.50291 | opp_overlap 4118827 4118830, overlap 4118824 4118827 4118830 AAGCACCCGAGTAAT GTCGCAAAACAATAAGGACGC AAGAG GCGTCCTTATTATTTTAAAAC CGTTGATTTGAACTT TERM 5215 4118852 - 4118824 - T 100 -12.6 -4.11751 | opp_overlap 4118827 4118830, overlap 4118815 4118827 4118830 AGTAATGTCGCAAAA CAATAAGGACGC AAGAG GCGTCCTTATTA TTTTAAAACCGTTGA TERM 5216 4118827 - 4118849 + T 100 -12.1 -4.17316 | opp_overlap 4118824 4118815 4118827 4118830, overlap 4118830 AATGTCGCAAAACAA TAAGGACGC AAGAG GCGTCCTTA TTATTTTAAAACCGT TERM 5217 4118849 - 4118827 - T 100 -12.1 -4.18164 | opp_overlap 4118827 4118830, overlap 4118824 4118815 4118830 AATGTCGCAAAACAA TAAGGACGC AAGAG GCGTCCTTA TTATTTTAAAACCGT TERM 5218 4118830 - 4118846 + T 85 -9.4 -4.20868 | opp_overlap 4118827 4118824 4118815 4118830, overlap 4118827 GTCGCAAAACAATAA GGACGC AAGAG GCGTCC TTATTATTTTAAAAC TERM 5219 4118846 - 4118830 - T 85 -9.4 -4.20868 | opp_overlap 4118830 4118827, overlap 4118827 4118824 4118815 GTCGCAAAACAATAA GGACGC AAGAG GCGTCC TTATTATTTTAAAAC Shewmr7_3473 4119837 - 4118941 - | GumN family protein Shewmr7_3474 4119886 - 4120194 + | hypothetical protein TERM 5220 4120228 - 4120204 - f 86 -8.7 -4.25681 | opp_overlap 4120204 AGCTAATTCAATAAA CGCTGAAAT ATCATCA ATTTCAGCG TTTGCTCTCATTTAC TERM 5221 4120204 - 4120228 + F 80 -8.7 -3.91087 | opp_overlap 4120204 AGCTAATTCAATAAA CGCTGAAAT ATCATCA ATTTCAGCG TTTGCTCTCATTTAC TERM 5222 4122045 - 4122013 - g 100 -17.2 -5.53288 | opp_overlap 4122015 4122022 GCCAAGGCAAAAAAA CAGGCAAAATCCGC GAGTA ACGGATTTTGCCTG TTAGAAGAACTCAAT TERM 5223 4122015 - 4122043 + G 80 -13.3 -3.02144 | opp_overlap 4122013, overlap 4122022 CAAGGCAAAAAAACA GGCAAAATCCG CGAGTAA CGGATTTTGCC TGTTAGAAGAACTCA Shewmr7_3475 4120333 - 4122084 + | diguanylate cyclase/phosphodiesterase Shewmr7_3476 4122631 - 4122107 - | hypothetical protein TERM 5224 4123074 - 4123059 - g 73 -3.2 -4.95302 | opp_overlap 4123059 GCAAATATAAGAAAA CTGACA ATTT TGACAG TTATGAGGCCTGTCG Shewmr7_3477 4122902 - 4123210 + | hypothetical protein Shewmr7_3478 4123360 - 4123674 + | hypothetical protein Shewmr7_3479 4124190 - 4123681 - | hypothetical protein TERM 5225 4123972 - 4123957 - G 74 -4 -5.01042 | gap 1 AAGTGAAATTAAAAA TGCGCGA AAT TCG-GCA AAAGCATAATCGGAA Shewmr7_3480 4124316 - 4124699 + | hypothetical protein TERM 5226 4124941 - 4124956 + G 73 -9 -3.65542 | overlap 4124940 CCACAAGCCGGATCT CATCGC CAGC GCGATG TATTTTGAAGATGGC Shewmr7_3481 4124774 - 4125571 + | response regulator receiver protein TERM 5227 4125936 - 4125923 - g 71 -5.3 -4.48902 | AGACAGGTAAAGAAA TTCAG ATCG CTGAA GCCACTGTGCCTAAG Shewmr7_3482 4125718 - 4125990 + | histone family protein DNA-binding protein TERM 5228 4126033 - 4126016 - f 82 -8.4 -4.40358 | opp_overlap 4126016 ATTGATTTTATAAAA CGCCTC CTCTGT GAGGCG TTTTTTTTGCCCTCA TERM 5229 4126016 - 4126033 + F 100 -8.4 -5.78622 | opp_overlap 4126016 ATTGATTTTATAAAA CGCCTC CTCTGT GAGGCG TTTTTTTTGCCCTCA TERM 5230 4126257 - 4126207 - f 80 -3.5 -5.31275 | overlap 4126208 4126210 4126211 4126221 CCTTATCAGAAAAAA CCAT-GATGCACCAATGTCACCCAC TCT GTGG-TGACATGAGTGAATCGATAA ATAAGTCAATCGAGG TERM 5231 4126252 - 4126211 - f 74 -10.3 -2.6676 | gap 1, overlap 4126210 4126208 4126207 4126221 ATCAGAAAAAACCAT GATGCACCAATGTCACCCAC TCT GTGG-TGACATGAGTGAATC GATAAATAAGTCAAT Shewmr7_3483 4126281 - 4126973 + | hypothetical protein TERM 5232 4126991 - 4127009 + T 100 -16 -5.06816 | opp_overlap 4126991 4127002 TTAAACGCTAAAAAA CGCCGCGA TAA TCGCGGCG TTTTTATTAGGCAAT TERM 5233 4127009 - 4126991 - T 100 -16 -5.12707 | opp_overlap 4126991, overlap 4127002 TTAAACGCTAAAAAA CGCCGCGA TAA TCGCGGCG TTTTTATTAGGCAAT Shewmr7_3484 4127921 - 4127016 - | alpha-L-glutamate ligase TERM 5234 4127230 - 4127248 + g 87 -7.4 -5.04601 | overlap 4127245 GCGGCAACCGCCATC TTGCGCTC TTC GGGCGTAA TTTTTACTTTCTCGC TERM 5235 4127367 - 4127353 - G 90 -10 -4.46212 | TCGCCGACCACAAAA CAGCGA ATA TCGCTG CCGTTGGACTCCTTA Shewmr7_3485 4129806 - 4128088 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase Shewmr7_3486 4130250 - 4129816 - | response regulator receiver protein Shewmr7_3487 4132400 - 4130247 - | multi-sensor signal transduction histidine kinase TERM 5236 4131692 - 4131722 + g 70 -8.5 -3.75506 | gap 2, opp_overlap 4131701 TCATACGAAATGGGG CGTAAACAAC--GCC TAT GGCCTGTTGTTTACG TTCTTCCTCCGTTAT TERM 5237 4132561 - 4132546 - H 82 -7.6 -4.5442 | CGCTTAATCACAAAA TTCAGC ACTC GCTGAA ATAACCCAAAATAGC Shewmr7_3488 4132715 - 4132891 + | hypothetical protein Shewmr7_3489 4133949 - 4132996 - | hypothetical protein Shewmr7_3490 4134238 - 4135593 + | hypothetical protein Shewmr7_3491 4136026 - 4135655 - | hypothetical protein Shewmr7_3492 4137616 - 4136174 - | RNA-metabolising metallo-beta-lactamase TERM 5238 4137144 - 4137100 - G 70 -10.7 -2.90075 | overlap 4137110 CTTCGCCCAACCACA GCTCAACCAATGCCGAGCCTA AAA TATGCCCCGCATCGGATAAGC AGATATCCACATGGG TERM 5239 4137259 - 4137271 + g 91 -3.3 -5.74288 | CTAAGGGTTCTAACT CATGC TTA GCACG TTTTTTATTGTTTCT Shewmr7_3493 4138604 - 4137735 - | hypothetical protein Shewmr7_3494 4139871 - 4138609 - | major facilitator transporter TERM 5240 4139077 - 4139064 - G 72 -8.1 -3.81741 | overlap 4139055 4139074 4139076 AACCGATAACCCAAA CGGCT AAAA AGCCG CCCACGGCCCAATGA TERM 5241 4139085 - 4139074 - G 82 -7.2 -4.64657 | overlap 4139064 4139076 CCAAACGGCTAAAAA GCCG CCCA CGGC CCAATGATCCCAGCC Shewmr7_3495 4140894 - 4139881 - | glyceraldehyde-3-phosphate dehydrogenase Shewmr7_3496 4141317 - 4141081 - | redox-active disulfide protein 2 Shewmr7_3497 4142322 - 4141327 - | permease TERM 5242 4142079 - 4142066 - G 72 -3.8 -4.78107 | GAGCATGAGCAAAAA GGTG TGATGG CACC AAATATCGACCCCAG TERM 5243 4142230 - 4142208 - G 74 -2.1 -5.1244 | CCAGCAATACAAAAA TTTTACTGA CATCT TCAACAAAA AAATGCACAGCGCCG Shewmr7_3498 4143383 - 4142364 - | bile acid:sodium symporter Shewmr7_3499 4143763 - 4143419 - | ArsR family transcriptional regulator TERM 5244 4144084 - 4144098 + G 74 -4.3 -4.84527 | CGGAGCCTATCCATA TGTCT ACTAA AGACA TTTTTCGTGTATCCC TERM 5245 4144743 - 4144732 - g 70 -2.2 -5.055 | TTAATTCGGAAAAAA GGAT TTTA ACCC CTTCTTTGCTTTGGG Shewmr7_3500 4144083 - 4146191 + | TonB-dependent siderophore receptor TERM 5246 4146240 - 4146220 - T 91 -6.7 -5.4505 | opp_overlap 4146220 GTTTCCAATAAAAAA GCCCCGGCA TCT TTCTGGGGC TTTTTACTCGGTGAT TERM 5247 4146220 - 4146240 + T 100 -8.9 -4.75372 | opp_overlap 4146220 GTTTCCAATAAAAAA GCCCCGGCA TCT TTCTGGGGC TTTTTACTCGGTGAT TERM 5248 4146303 - 4146266 - T 85 -9.2 -4.08144 | gap 1, opp_overlap 4146295 4146297, overlap 4146294 GTGATCAATTACAAA CCGCGCTGCCATTCC TGCCTTAAG GGAATG-CTGCGCGG CGCATTAATCGCCTG Shewmr7_3501 4147146 - 4146259 - | radical SAM domain-containing protein TERM 5249 4147687 - 4147669 - H 78 -6 -4.81359 | opp_overlap 4147669 AATTTAAAGATAAAA CGCTTACT GCT ACTAAGCG TTCTGCTTTGGATAA TERM 5250 4148326 - 4148310 - g 70 -3 -4.88918 | CCACGGTAAACAAAA CCAAGT GCACG ACTTAG CCTTAACATCGATCC Shewmr7_3503 4148158 - 4150119 + | hypothetical protein TERM 5251 4150159 - 4150130 - T 100 -15.1 -3.77607 | opp_overlap 4150136, overlap 4150136 AATAATCTCATCAAA GAAAAAGGGCCGT GATA ACGGCCCTTTTGC GCAAACTCAACTCAA TERM 5252 4150136 - 4150153 + T 100 -12.7 -4.08216 | opp_overlap 4150130 4150136 CTCATCAAAGAAAAA GGGCCGT GATA ACGGCCC TTTTGCGCAAACTCA TERM 5253 4150153 - 4150136 - T 100 -12.7 -5.33405 | opp_overlap 4150136, overlap 4150130 CTCATCAAAGAAAAA GGGCCGT GATA ACGGCCC TTTTGCGCAAACTCA Shewmr7_3504 4151900 - 4150179 - | hypothetical protein TERM 5254 4150611 - 4150629 + g 73 -5.2 -4.60889 | TAAGCCACTATTTTC CTCCAGTG ATA CGCTGCAG TTTTTCGCAATAGTT Shewmr7_3505 4153464 - 4152100 - | sigma-54 dependent trancsriptional regulator TERM 5255 4152730 - 4152718 - G 73 -5.5 -4.67011 | opp_overlap 4152726 AATTTCATCTAAAAA TAGCG TGC CGCCA TTGGCCTGCTCTAAA Shewmr7_3506 4154116 - 4153790 - | antibiotic biosynthesis monooxygenase Shewmr7_3507 4154632 - 4154159 - | GCN5-related N-acetyltransferase TERM 5256 4154725 - 4154697 - R 100 -14 -5.24129 | overlap 4154721 4154722 TCGCCGCATAAAAAA GCGCCTTAATCC TGGGG GAATTAAGGCGC AAGGGTTACGCATTG Shewmr7_3508 4156635 - 4155028 - | EmrB/QacA family drug resistance transporter TERM 5257 4155579 - 4155568 - G 100 -7.2 -5.56264 | GGCAAACATAAAAAA GCCG AAGG CGGC TAAATAACGCCCGTC Shewmr7_3509 4157704 - 4156649 - | secretion protein HlyD family protein Shewmr7_3510 4157802 - 4158755 + | LysR family transcriptional regulator TERM 5258 4159201 - 4159212 + G 78 -5.8 -4.87786 | TCGACTTTACCATTA TCGC CTTC GCGA TTTTTATGGGCTTAA mscL 4158939 - 4159349 + | large-conductance mechanosensitive channel TERM 5259 4159385 - 4159412 + T 100 -11.4 -5.08601 | opp_overlap 4159390, overlap 4159390 CAATTGATTGCAATA AAAAACCCATCG ACTT CGATGGGTTTTG TTTTTGTTCAAGTGC TERM 5260 4159407 - 4159390 - T 100 -11.3 -5.46657 | opp_overlap 4159385 4159390 GATTGCAATAAAAAA CCCATCG ACTT CGATGGG TTTTGTTTTTGTTCA TERM 5261 4159390 - 4159407 + T 100 -11.3 -5.42605 | opp_overlap 4159390, overlap 4159385 GATTGCAATAAAAAA CCCATCG ACTT CGATGGG TTTTGTTTTTGTTCA Shewmr7_3512 4159756 - 4159433 - | antibiotic biosynthesis monooxygenase TERM 5262 4159878 - 4159845 - R 100 -13.3 -3.09492 | gap 1, overlap 4159863 TTTTTAACTTTAACA TTGAGCCTTG-CCACA AAA TGAGGCCAAGGCTCAA CATCCCACTAGGCGG Shewmr7_3513 4163098 - 4159886 - | CzcA family heavy metal efflux protein TERM 5263 4160257 - 4160235 - G 70 -9.1 -3.60525 | overlap 4160249 GGTACCGACAGATAA GTGCCGCTG ACAAA CAGCGCCAC GATACCGCCGATCAA Shewmr7_3514 4164487 - 4163195 - | RND family efflux transporter MFP subunit Shewmr7_3515 4165874 - 4164504 - | outer membrane efflux protein Shewmr7_3516 4166545 - 4166096 - | hypothetical protein Shewmr7_3517 4166912 - 4166709 - | hypothetical protein Shewmr7_3518 4167314 - 4166949 - | hypothetical protein Shewmr7_3519 4167463 - 4167876 + | hypothetical protein Shewmr7_3520 4167978 - 4168412 + | 3-dehydroquinate dehydratase TERM 5264 4168742 - 4168718 - g 82 -11.3 -3.66178 | CCTCGCAAGGCCAAA CCGAGGCGCCC TTG GTGCGCATCGG TCAAAGGGTGGCCCG Shewmr7_3521 4168447 - 4168914 + | biotin carboxyl carrier protein TERM 5265 4169166 - 4169183 + G 79 -11.3 -3.51411 | overlap 4169161 CCCCAACACGGTCAT CCACTGC GCTG GCAGTGG TTACTTTGGCGCACT Shewmr7_3522 4168930 - 4169607 + | short-chain dehydrogenase/reductase SDR TERM 5266 4169649 - 4169622 - T 100 -15.6 -3.67141 | opp_overlap 4169616 4169611 AGAAGTTTACTTAAA GGCGGCGCAGAT ATAG ATCTGCGCCGTC ATGGTCAGCTTAATC Shewmr7_3523 4170870 - 4169659 - | major facilitator transporter TERM 5267 4170940 - 4170918 - R 100 -6.9 -5.7946 | overlap 4170920 TGGCTAAGAAAAAAA TAGGAGCCC ACTCG GGGCTCCCG TCGATAAGGCCTAAA TERM 5268 4170938 - 4170920 - R 100 -11.7 -4.54306 | overlap 4170918 GCTAAGAAAAAAATA GGAGCCC ACTCG GGGCTCC CGTCGATAAGGCCTA Shewmr7_3524 4171732 - 4170962 - | hypothetical protein TERM 5269 4172147 - 4172124 - g 70 -8.8 -3.54488 | gap 1, overlap 4172122 GCTGGGCAAAGAAGA CCCGC-TCGCG CTG CGCGATGTGGG TGAACTGCTGGCGTT Shewmr7_3525 4171891 - 4173372 + | 3-octaprenyl-4hydroxybenzoate decarboxylase TERM 5270 4173418 - 4173431 + F 74 -9.5 -3.2614 | opp_overlap 4173416 4173418 TAAGCCAAGAGAATA GGCCG CCAG CGGCC TTAATGTGACACCTA TERM 5271 4173431 - 4173418 - f 76 -9.5 -3.43553 | opp_overlap 4173418, overlap 4173416 TAAGCCAAGAGAATA GGCCG CCAG CGGCC TTAATGTGACACCTA fre 4173483 - 4174181 + | FMN reductase TERM 5272 4174257 - 4174240 - f 100 -11.3 -4.56978 | opp_overlap 4174240 GGCTCAAACAATAAA CCCCAGT TTTT ACTGGGG TTTTGTTTTTCTATC TERM 5273 4174240 - 4174257 + F 100 -11.3 -5.38839 | opp_overlap 4174240 GGCTCAAACAATAAA CCCCAGT TTTT ACTGGGG TTTTGTTTTTCTATC TERM 5274 4174343 - 4174321 - f 70 -7.6 -3.72576 | TTCGTTTGGATTAAA GTCGTGGGGC TTC ACCCCACACC CGACCAAGGAGGACT TERM 5275 4174781 - 4174771 - g 82 -4 -5.28481 | GATGGAACCAAAAAA TGAA AAC TTCA ATGAGCTAATTGGTG Shewmr7_3527 4174751 - 4176418 + | protein of unknown function DUF1524 RloF TERM 5276 4176565 - 4176591 + T 73 -8.7 -3.53012 | opp_overlap 4176563 4176564 4176561, overlap 4176569 GTTGAAGGAAATAGC GTAACGCAGAC AGGAC GTCTGCGTAGC TTTCGGGGGGAAGGG TERM 5277 4176569 - 4176587 + T 74 -10.3 -2.64155 | opp_overlap 4176563 4176564 4176561, overlap 4176565 AAGGAAATAGCGTAA CGCAGAC AGGAC GTCTGCG TAGCTTTCGGGGGGA TERM 5278 4176838 - 4176823 - T 71 -4.6 -4.68506 | overlap 4176824 4176825 AACGAAGTTTAAAAA CCCGCA GCCC TGCGGC GACTGAGCAGCCCCT Shewmr7_3528 4177479 - 4176853 - | flavoprotein oxygenase TERM 5279 4177609 - 4177580 - R 93 -12.3 -3.18274 | opp_overlap 4177586, overlap 4177562 4177586 TGGATGTTAATCCAA TAAAAAGAGGGAC ATGC GTCCCTCTTTTTG ACTGAAGAATCAAGC TERM 5280 4177586 - 4177603 + r 100 -11.3 -4.65895 | opp_overlap 4177586 4177580 TTAATCCAATAAAAA GAGGGAC ATGC GTCCCTC TTTTTGACTGAAGAA TERM 5281 4177603 - 4177586 - R 100 -11.3 -5.13741 | opp_overlap 4177586, overlap 4177580 TTAATCCAATAAAAA GAGGGAC ATGC GTCCCTC TTTTTGACTGAAGAA Shewmr7_3529 4182574 - 4177628 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 5282 4180211 - 4180221 + g 74 -2.4 -5.09426 | CTTAACGGTACGCAT CCAG CTA CAGG TTTTTTCACATTCCA TERM 5283 4181608 - 4181638 + g 70 -2.5 -5.00884 | gap 1, overlap 4181619 GAGAACCATGACCCG CGTAATC-CTCAGC GTTA GCTGGGCGGATGCG TTTTTTCGCGCCGCT TERM 5284 4185080 - 4185059 - g 70 -8.8 -3.50119 | overlap 4185054 4185057 TATTAAGGAACAAGA CTTAGCCA AAGTCG TGGCTAAG GTCGAAGGCATGCAA Shewmr7_3530 4182858 - 4185251 + | fatty acid cistrans isomerase TERM 5285 4185276 - 4185259 - T 100 -11.3 -5.45652 | opp_overlap 4185259 ATCGCTAACAAAAAA GGGAACC CTGG GGTTCCC TTTTTATCAACTTAC TERM 5286 4185259 - 4185276 + T 100 -11.3 -4.87786 | opp_overlap 4185259 ATCGCTAACAAAAAA GGGAACC CTGG GGTTCCC TTTTTATCAACTTAC Shewmr7_3531 4187426 - 4185294 - | endothelin-converting protein 1 TERM 5287 4187645 - 4187615 - R 100 -13.5 -4.7497 | gap 1, opp_overlap 4187621 TGCATCTAGCAAAAA GCTAAACAGCCGAT GGCT ATCGGCTGTTT-GC ATAACACACTAGGTT TERM 5288 4187621 - 4187640 + r 93 -12.2 -3.64822 | opp_overlap 4187615 TAGCAAAAAGCTAAA CAGCCGAT GGCT ATCGGCTG TTTGCATAACACACT Shewmr7_3532 4188942 - 4187659 - | lysine decarboxylase transcriptional regulator, CadC Shewmr7_3533 4190043 - 4189156 - | copper ABC transporter, permease protein Shewmr7_3534 4191086 - 4190040 - | ABC transporter related TERM 5289 4190466 - 4190481 + g 71 -10.4 -3.17571 | overlap 4190465 GGTACTGATGATGAT GGCGCA GCCC TGCGCC TTCAGTTGCGCCATT Shewmr7_3535 4192356 - 4191067 - | periplasmic copper-binding protein Shewmr7_3536 4192857 - 4192366 - | NosL family protein Shewmr7_3537 4193924 - 4192977 - | polysulphide reductase, NrfD Shewmr7_3538 4194634 - 4193927 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shewmr7_3539 4195395 - 4194721 - | formate-dependent nitrite reductase, NrfG protein Shewmr7_3540 4196239 - 4195460 - | FKBP-type peptidyl-prolyl isomerase domain-containing protein Shewmr7_3541 4196776 - 4196333 - | rhodanese domain-containing protein TERM 5290 4196546 - 4196536 - G 80 -2.4 -5.50499 | GCACATTGAAAAAAA CCGC TCC GGGG ATAAAACCTTCCGCC TERM 5291 4196850 - 4196882 + r 83 -11.3 -3.06915 | CTACATTTTCTGTGC GCTCAGGCCGTTACC ATC GATAATGGCTTGGGC TTGAGTGACATAGGT Shewmr7_3542 4198964 - 4196835 - | cytochrome c, putative TERM 5292 4198942 - 4198926 - G 73 -3 -4.94962 | opp_overlap 4198926, overlap 4198921 AGAACCTAAACAAAA TAGCAC GCTTA ATGCTA CTTTGGATTTCCATC TERM 5293 4199189 - 4199177 - H 89 -3.5 -5.67711 | CAAATAAAAGAAAAA TATTT TAG AAATA AATCGTGGTTTTTGA Shewmr7_3543 4199512 - 4201551 + | cytochrome c-type biogenesis protein CcmF Shewmr7_3544 4201548 - 4201982 + | cytochrome C biogenesis protein TERM 5294 4202278 - 4202255 - g 71 -6.8 -4.20817 | gap 1 CACAGCTTAAAACAA CACCAAGG-CA AAC TGACCTTAGTG AATCTGTGGGCGACT Shewmr7_3545 4202039 - 4202623 + | redoxin domain-containing protein TERM 5295 4202734 - 4202760 + F 78 -8.7 -3.90048 | overlap 4202732 AAATCTTTGCCGAAG CCCGCTGCT CCCCGATTT GGCAGCGGG TATTTTTACCCCAAG Shewmr7_3546 4202888 - 4203466 + | hypothetical protein TERM 5296 4203520 - 4203469 - T 100 -13.9 -4.28651 | gap 2, opp_overlap 4203471, overlap 4203471 4203501 AGTAAAAGCGTAAAA CAGCTGCCTAGGCTGCACAGCATGT AGAA ACA-GC-ATGCAGCCTAGGCCGCTT CCTTAGTCCGATGCG TERM 5297 4203518 - 4203471 - T 100 -16.5 -3.73411 | gap 2, opp_overlap 4203471, overlap 4203469 4203501 TAAAAGCGTAAAACA GCTGCCTAGGCTGCACAGCATGT AGAA ACA-GC-ATGCAGCCTAGGCCGC TTCCTTAGTCCGATG TERM 5298 4203471 - 4203518 + T 100 -14.3 -3.40371 | gap 2, opp_overlap 4203469 4203471 4203501 TAAAAGCGTAAAACA GCTGCCTAGGCTGCACAGCATGT AGAA ACA-GCA-TGCAGCCTAGGCCGC TTCCTTAGTCCGATG Shewmr7_3547 4205185 - 4203611 - | response regulator receiver sensor signal transduction histidine kinase TERM 5299 4204528 - 4204489 - G 70 -2.7 -4.82901 | overlap 4204490 4204492 4204493 GGGCGCTGACAAAAA TCACTGGGATCTGCGCC GATTTA GGCTCAGATCTCAAGGC TTGCAGCACTTGGTG TERM 5300 4204596 - 4204574 - G 74 -11.3 -3.14944 | opp_overlap 4204574 4204577 4204594, overlap 4204577 CATCATCACATCTAA CAACACCGC ATCGG GCGGCGTTG TCGATTGGCAAATTT TERM 5301 4205121 - 4205100 - G 71 -5.7 -4.28018 | opp_overlap 4205105 AACACCTGACCAAAA CCGAGTTGC CGCA GCTGCTCGG CCATAATCTTACGCA Shewmr7_3548 4210221 - 4205176 - | multi-sensor hybrid histidine kinase TERM 5302 4208656 - 4208633 - G 73 -11 -2.90307 | overlap 4208624 4208632 TCAAGACTATTAAAG TGTGTCCCCT CAAT AGGGGTCACA ATCACGGGCGGATAC TERM 5303 4208858 - 4208869 + g 71 -5.8 -4.2828 | opp_overlap 4208844 TCCGCCATCATGCCG CGGT GAAT ACCG TTTTCATCAATAAAA Shewmr7_3549 4210776 - 4211822 + | response regulator receiver modulated metal dependent phosphohydrolase Shewmr7_3550 4211891 - 4212181 + | putative mitomycin resistance protein Shewmr7_3551 4213296 - 4212202 - | hypothetical protein TERM 5304 4213354 - 4213338 - R 93 -10.9 -4.16921 | CAACAAGGTGGAAAA CTTGGCA GAG TGCCAAG CAACAACCAGCCTTT TERM 5305 4213497 - 4213475 - R 80 -10.6 -3.57144 | GCTTGCATCCCCAAA GGCCTTCG AATGTCG CGAAGGCC AAATGGCTGAAAATC Shewmr7_3552 4214434 - 4213514 - | redoxin domain-containing protein TERM 5306 4213900 - 4213912 + g 77 -9.1 -3.99494 | GCTCCCAAGGTTTCA GCAGC TTA GCTGC TTGTTCTTGGCTTGG TERM 5307 4214293 - 4214306 + g 79 -5.3 -5.01732 | opp_overlap 4214288 TAAGGTAAATCGGCT TATCG CCAG CGATA TTTTTTAAGGAGGTT TERM 5308 4214585 - 4214620 + r 76 -9.3 -3.53012 | opp_overlap 4214581 4214585 GCCAGTATAAATGAA TAGGCTTATATTTTA GCCATG TAAAATTTAAGCCTA TTTGAGCAGAAGCGA TERM 5309 4214620 - 4214585 - R 78 -9.3 -3.63228 | opp_overlap 4214585, overlap 4214581 GCCAGTATAAATGAA TAGGCTTATATTTTA GCCATG TAAAATTTAAGCCTA TTTGAGCAGAAGCGA Shewmr7_3553 4215831 - 4214677 - | hypothetical protein TERM 5310 4215799 - 4215821 + g 70 -4.2 -4.70879 | overlap 4215801 AAAGGCAATGCGGTA TTTAACTTGG CGT CTAAGTTGGA TTTTTAGCATTTAAC Shewmr7_3554 4217039 - 4215978 - | 2-nitropropane dioxygenase, NPD Shewmr7_3555 4217427 - 4217840 + | hypothetical protein Shewmr7_3556 4217905 - 4218330 + | hypothetical protein ubiA 4219276 - 4218416 - | 4-hydroxybenzoate octaprenyltransferase TERM 5311 4219311 - 4219345 + r 88 -10.1 -4.10453 | CTAATTTTTTATCTC GGTTGCTAGGGTA AGCATCATA TACCCTAGCTACC TTTTAAGCGAATTTG uvrD 4221570 - 4219402 - | DNA-dependent helicase II TERM 5312 4221722 - 4221757 + H 100 -14 -3.06302 | opp_overlap 4221710, overlap 4221740 4221741 CAAGCACATCCCTGT GTGCTCGACCGTGACA TCCA TGTCACGGACGGTCAC TTCCATGACAGTGCT TERM 5313 4222081 - 4222095 + H 70 -5.7 -4.37198 | AATTAGATCTCAATT TTGGC AATCA GCCAA TTTTCACTTTAGCTT TERM 5314 4222313 - 4222299 - H 80 -5 -5.24129 | overlap 4222301 CTTGTTGATAAAAAA TATTGC CTT GCAACA CATATTGTTAATTAC TERM 5315 4223831 - 4223810 - H 73 -5.1 -4.7254 | gap 1, opp_overlap 4223810, overlap 4223813 ACTCTTGATTAAAAA TCAGGGGGGT GAA ACCCCAC-GA CTTTGACTTTGGCTT Shewmr7_3559 4224029 - 4225342 + | hypothetical protein Shewmr7_3560 4226607 - 4225489 - | hypothetical protein Shewmr7_3561 4227622 - 4226618 - | SecC motif-containing protein Shewmr7_3562 4228072 - 4227665 - | NUDIX hydrolase Shewmr7_3563 4228982 - 4228101 - | protein of unknown function, zinc metallopeptidase putative TERM 5316 4229052 - 4229062 + r 77 -8.2 -4.07568 | overlap 4229050 GGATCATTCTGCTCG GCGG GCG CCGC TTTTAACGAGCGCAA Shewmr7_3564 4229455 - 4229030 - | hypothetical protein Shewmr7_3565 4229700 - 4229467 - | hypothetical protein TERM 5317 4229508 - 4229526 + g 100 -7.4 -5.24449 | overlap 4229496 CGACAGCTTGTTTAA GCTGTTGG TCC TCAGCAGC TTTTTTCGCTTTCTC Shewmr7_3566 4230159 - 4231652 + | protein of unknown function DUF853, NPT hydrolase putative TERM 5318 4232048 - 4232031 - g 71 -5.5 -4.46615 | GACGATGAAGGAAAA GCGTGCC GCAA AACACGC CAAAAACGCGTCTAA Shewmr7_3567 4231954 - 4232088 + | hypothetical protein TERM 5319 4232131 - 4232150 + F 100 -8.6 -4.85599 | opp_overlap 4232127 4232131 AATATCGACAATTAA GGGTTAAC TGCG GTTAGCCC TTTTTATCGACTCGC Shewmr7_3568 4232591 - 4233547 + | TRAP transporter solute receptor TAXI family protein TERM 5320 4233615 - 4233587 - f 100 -16.2 -3.05816 | CCATTTTCCACCTAA GCACTTGAGTGA TAGCG TCACTCAAGTGC TGCGTCGCCCTCTGT TERM 5321 4233789 - 4233804 + G 70 -3.2 -4.89233 | overlap 4233785 4233791 GACCCAAGTTTTGCG GGCAAC CCAC GTTGGC TTTTTACTGTTAATC TERM 5322 4234358 - 4234383 + G 70 -8.3 -3.67864 | gap 1 TTACGGGCTCGGGCG TTGCCAACGTGG TGA CCACGG-GGCAA TTTACCATTCCCTTG Shewmr7_3569 4233655 - 4235688 + | TRAP transporter, 4TM/12TM fusion protein Shewmr7_3570 4235722 - 4236120 + | hypothetical protein Shewmr7_3571 4237153 - 4236167 - | diguanylate cyclase with PAS/PAC sensor TERM 5323 4236583 - 4236569 - G 71 -7.8 -4.10791 | overlap 4236573 AAGATCGATAAAGAA CAACGC CCC GCGCTG GCCGGGTTGCAATAA TERM 5324 4236877 - 4236895 + g 76 -8.2 -4.20136 | CTTTGATGACCCAGT CTTTATCC TCT GGATGAAG TTTGCTTTTCCAGCT TERM 5325 4237104 - 4237124 + g 70 -4.7 -4.59342 | overlap 4237116 TCACGTTTAAGCTCG GCGATTTCG GCC TGAAGTTGC TTTATTTGTGCTGCA TERM 5326 4237286 - 4237264 - R 95 -11.3 -3.89614 | opp_overlap 4237265 GGCAAGCCGCATAAA GGAGTCAGC CAGAT GCTGACCCC ATCAAGCTGACACTT Shewmr7_3572 4237635 - 4237300 - | peptidylprolyl isomerase, FKBP-type Shewmr7_3573 4237825 - 4238247 + | thioredoxin TERM 5327 4238268 - 4238296 + T 100 -13.3 -3.6682 | opp_overlap 4238273, overlap 4238273 GTGAGTTTCGCCCAT AAAAATACCCAGC TTA GCTGGGTATTTTA TTTGGATGAATCAGG TERM 5328 4238291 - 4238273 - T 100 -13.2 -4.82901 | opp_overlap 4238268 4238273 TTTCGCCCATAAAAA TACCCAGC TTA GCTGGGTA TTTTATTTGGATGAA TERM 5329 4238273 - 4238291 + T 100 -13.2 -4.90778 | opp_overlap 4238273, overlap 4238268 TTTCGCCCATAAAAA TACCCAGC TTA GCTGGGTA TTTTATTTGGATGAA Shewmr7_3574 4239720 - 4238317 - | anion transporter Shewmr7_3575 4240065 - 4239808 - | hypothetical protein Shewmr7_3576 4240372 - 4241409 + | diguanylate cyclase with GAF sensor Shewmr7_3577 4241630 - 4242802 + | major facilitator transporter TERM 5330 4242852 - 4242823 - T 100 -15.1 -3.21695 | opp_overlap 4242828, overlap 4242828 GTATTACCAAGTGAA TAAAATGGGCGCC TTAA GGCGCCCATTTTT CAAACTGTTTTTGAA TERM 5331 4242828 - 4242847 + T 100 -15 -4.62904 | opp_overlap 4242823 4242828 ACCAAGTGAATAAAA TGGGCGCC TTAA GGCGCCCA TTTTTCAAACTGTTT TERM 5332 4242847 - 4242828 - T 100 -15 -4.72631 | opp_overlap 4242828, overlap 4242823 ACCAAGTGAATAAAA TGGGCGCC TTAA GGCGCCCA TTTTTCAAACTGTTT Shewmr7_3578 4244471 - 4242852 - | PepSY-associated TM helix domain-containing protein Shewmr7_3579 4244768 - 4244478 - | hypothetical protein Shewmr7_3580 4245026 - 4244772 - | hypothetical protein TERM 5333 4245293 - 4245269 - H 71 -8.7 -3.27774 | overlap 4245271 CACGTTAACCATTAA GATACATTTTG CTG CAAAATGTAAC GCCAAGTGTTTAAAA TERM 5334 4245291 - 4245271 - H 74 -9.9 -3.20227 | overlap 4245269 CGTTAACCATTAAGA TACATTTTG CTG CAAAATGTA ACGCCAAGTGTTTAA TERM 5335 4246217 - 4246229 + G 75 -9.1 -3.93695 | CACAGTGCTACCGAC GGGCA CTC TGCCC TTTATCGATGCTAAA Shewmr7_3581 4245369 - 4246256 + | band 7 protein TERM 5336 4246288 - 4246261 - T 72 -6.2 -4.34223 | AATCGAACTAATAAA CGACTGAGCG TCACGCAT CGCTCTGCCG CGTGAGCAGCACCAT TERM 5337 4246324 - 4246343 + T 100 -10 -4.87893 | opp_overlap 4246324 TGTCACAATAAAAAA TCCCCAGT CATT GCTGGGGA TTTTTAGTTAGCGTT TERM 5338 4246343 - 4246324 - T 100 -9.3 -5.55769 | opp_overlap 4246324 TGTCACAATAAAAAA TCCCCAG TCATTG CTGGGGA TTTTTAGTTAGCGTT Shewmr7_3582 4247868 - 4246363 - | permease TERM 5339 4247191 - 4247210 + g 100 -11.4 -4.67641 | opp_overlap 4247189 AGTTGCCATTAGACT TGGCGCCG CCAT CGGCGTCA TTTTGATTTTGGGCT zntR 4248344 - 4247871 - | zinc-responsive transcriptional regulator TERM 5340 4248210 - 4248199 - G 72 -3.6 -4.77165 | overlap 4248200 4248203 GCTCGCAGAATAAAA CGCA GCCG CGCG GCATCGGCATCGGTA TERM 5341 4248438 - 4248419 - H 77 -8.6 -3.97947 | TGGAGCGAGTATAAA CCTTAGAG CCTA CTCCAAGG TCAAGGGCTATTTTG purH 4248682 - 4250280 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 5342 4250290 - 4250314 + F 100 -16.5 -4.13995 | CACTAATGCCACCTA CAGCCAGCACG CCA TGTGCTGGCTG TTTCGTTTATCGCAC Shewmr7_3585 4250386 - 4251684 + | phosphoribosylamine--glycine ligase TERM 5343 4251698 - 4251728 + F 100 -15.7 -2.79912 | opp_overlap 4251696 4251706, overlap 4251706 AAGCTTTAATTCATT TAAAAAAACCGGC TATGC GCCGGTTTTTTTA TGCCTTATTTTTGAC TERM 5344 4251720 - 4251706 - f 100 -8.5 -5.47821 | opp_overlap 4251698 4251706, overlap 4251696 ATTCATTTAAAAAAA CCGGC TATGC GCCGG TTTTTTTATGCCTTA TERM 5345 4251706 - 4251720 + F 100 -8.5 -5.66684 | opp_overlap 4251706 4251696, overlap 4251698 ATTCATTTAAAAAAA CCGGC TATGC GCCGG TTTTTTTATGCCTTA TERM 5346 4254860 - 4254870 + G 74 -6.8 -4.43213 | opp_overlap 4254859 4254860 CTCACAGGCAAAAAT TGGC GCA GCCA TTTTGATATGTTGGG Shewmr7_3586 4251866 - 4255087 + | hypothetical protein TERM 5347 4255155 - 4255132 - f 100 -14 -4.09519 | opp_overlap 4255132 4255136, overlap 4255136 AGCATGGATAAACAA TAAACCTCGC CGAT GCGAGGTTTA TTTTTGCTCGAAAGC TERM 5348 4255132 - 4255155 + F 100 -14 -4.72272 | opp_overlap 4255132 4255136, overlap 4255136 AGCATGGATAAACAA TAAACCTCGC CGAT GCGAGGTTTA TTTTTGCTCGAAAGC TERM 5349 4255151 - 4255136 - f 100 -10.4 -4.63048 | opp_overlap 4255132 4255136, overlap 4255132 TGGATAAACAATAAA CCTCGC CGAT GCGAGG TTTATTTTTGCTCGA TERM 5350 4255136 - 4255151 + F 100 -10.4 -4.91852 | opp_overlap 4255136 4255132, overlap 4255132 TGGATAAACAATAAA CCTCGC CGAT GCGAGG TTTATTTTTGCTCGA Shewmr7_3587 4255244 - 4255468 + | hypothetical protein Shewmr7_3588 4256275 - 4255472 - | short chain dehydrogenase Shewmr7_3589 4258921 - 4256351 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 5351 4257619 - 4257599 - G 70 -9 -3.53761 | TAACTGCTCTTCAAA GGCTTGCC GATTA AGCAAGCC GGTAATGCCATCGAA TERM 5352 4258288 - 4258277 - G 73 -5.8 -4.4891 | GGGATCAGTAGAAAA CTGC ACCT GCAG ATACAATGGCGCGTT TERM 5353 4259287 - 4259256 - R 76 -11 -2.66291 | opp_overlap 4259257 4259264, overlap 4259264 CACAGAGTCACAGCA TAAAAAAACGGACC TTAA GGTCCGTTTTTTCT TCAGTATCGCTTACT TERM 5354 4259257 - 4259286 + r 93 -12.3 -3.14522 | opp_overlap 4259256 4259264, overlap 4259264 ACAGAGTCACAGCAT AAAAAAACGGACC TTAA GGTCCGTTTTTTC TTCAGTATCGCTTAC TERM 5355 4259279 - 4259264 - R 100 -10.4 -5.69473 | opp_overlap 4259264 4259257, overlap 4259256 CACAGCATAAAAAAA CGGACC TTAA GGTCCG TTTTTTCTTCAGTAT TERM 5356 4259264 - 4259279 + r 100 -10.4 -5.49234 | opp_overlap 4259256 4259264, overlap 4259257 CACAGCATAAAAAAA CGGACC TTAA GGTCCG TTTTTTCTTCAGTAT Shewmr7_3590 4260362 - 4259298 - | uroporphyrinogen decarboxylase TERM 5357 4260653 - 4260680 + H 100 -18.6 -5.27938 | opp_overlap 4260650 4260647 CTATATACATTACTC GCCCAACGATAG GTTT CTATCGTTGGGC TTTTTATTTCCGCAT Shewmr7_3591 4260810 - 4261307 + | anti-RNA polymerase sigma 70 factor TERM 5358 4261470 - 4261441 - T 100 -12.3 -4.33956 | opp_overlap 4261442 4261448, overlap 4261448 GGTAAAATAGAGAAA CAAAAAAGCCAGC TTTC GCTGGCTTTTTCA TTATCATATCAATCG TERM 5359 4261442 - 4261469 + T 80 -11.4 -2.68223 | opp_overlap 4261441 4261448, overlap 4261448 GTAAAATAGAGAAAC AAAAAAGCCAGC TTTC GCTGGCTTTTTC ATTATCATATCAATC TERM 5360 4261463 - 4261448 - T 100 -10.4 -5.76237 | opp_overlap 4261442 4261448, overlap 4261441 TAGAGAAACAAAAAA GCCAGC TTTC GCTGGC TTTTTCATTATCATA TERM 5361 4261448 - 4261463 + T 100 -10.4 -4.94972 | opp_overlap 4261448 4261441, overlap 4261442 TAGAGAAACAAAAAA GCCAGC TTTC GCTGGC TTTTTCATTATCATA Shewmr7_3592 4264159 - 4261487 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 5362 4264401 - 4264411 + H 80 -2.6 -5.49809 | overlap 4264396 GCTCACAAAATCCTG TTTA GGG TAAA TTTTTTTAAACTTTG Shewmr7_3593 4264519 - 4265175 + | 2-deoxyglucose-6-phosphatase TERM 5363 4265200 - 4265229 + T 95 -12.3 -3.31097 | opp_overlap 4265206, overlap 4265206 TGATTGACGCAAACT AAAAAAGCCAGAC ATCC GTCTGGCTTTTTC GTTTTCATTCTATGG TERM 5364 4265206 - 4265223 + T 100 -11.3 -5.13016 | opp_overlap 4265206, overlap 4265200 ACGCAAACTAAAAAA GCCAGAC ATCC GTCTGGC TTTTTCGTTTTCATT TERM 5365 4265223 - 4265206 - T 100 -11.3 -5.38497 | opp_overlap 4265206 4265200 ACGCAAACTAAAAAA GCCAGAC ATCC GTCTGGC TTTTTCGTTTTCATT Shewmr7_3594 4267288 - 4265246 - | endothelin-converting protein 1 TERM 5366 4267492 - 4267463 - R 100 -19.5 -4.83615 | opp_overlap 4267460 TACTGTTGATAAAAA CGAAGGGCATAAC CTCA GTTATGCCCTTCG GGGTAATTAGAACGC Shewmr7_3595 4269715 - 4267499 - | patatin TERM 5367 4267768 - 4267745 - G 71 -5.2 -4.58085 | ATACTGATAAACAAA GGCGCCAA AGAGTTTA TGGGCGCC AGTCAGCGAGTCCTT TERM 5368 4269925 - 4269902 - R 100 -9.6 -5.31545 | AATAATAGCAAAAAA GCCGCAAATA AAAG TACCTGCGGC TCGATGGAATACACT Shewmr7_3596 4274346 - 4269946 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 5369 4273256 - 4273239 - G 74 -9.9 -3.63627 | CTCTGATATCGTAAA TGCTCTC ATGG GAGAGCA AGCCTTCAATCGGGA TERM 5370 4273341 - 4273327 - G 77 -10 -3.68529 | overlap 4273332 ATTGGATGAGCCAAA CCAGAG CCC CTCTGG TGCTGCTAGAATCGA TERM 5371 4274535 - 4274506 - R 78 -10.1 -3.52102 | opp_overlap 4274513 4274528, overlap 4274492 4274513 ATTTTATCGAGACAA TAAAAAAGCGCCC TAAT GGACGCTTTTTAA AAAAGATTTCAGCTT TERM 5372 4274513 - 4274528 + r 73 -6 -4.57341 | opp_overlap 4274506 4274513 CGAGACAATAAAAAA GCGCCC TAAT GGACGC TTTTTAAAAAAGATT TERM 5373 4274528 - 4274513 - R 100 -8.2 -5.60689 | opp_overlap 4274513, overlap 4274506 CGAGACAATAAAAAA GCGCCC TAAT GGACGC TTTTTAAAAAAGATT Shewmr7_3597 4275976 - 4274549 - | dihydrolipoamide dehydrogenase TERM 5374 4276117 - 4276097 - R 100 -9.7 -5.14682 | opp_overlap 4276094 4276097 TCACAATAAACAAAA GGCCACTCA AGA TGAGCAGCC TTATTTGTTTACAGA Shewmr7_3598 4278141 - 4276126 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase aceE 4280820 - 4278154 - | pyruvate dehydrogenase subunit E1 pdhR 4281653 - 4280901 - | transcriptional regulator PdhR TERM 5375 4281677 - 4281689 + r 80 -6.3 -4.87665 | opp_overlap 4281677 CAGCTCCGTTGTAAA TTGGT CTT ACCAA TTTTTATGAGTGAGC TERM 5376 4281993 - 4281965 - R 100 -6.8 -5.79595 | gap 1, opp_overlap 4281965 TCTGAAAACAAAAAA GGAATTGG-CCAC ACTC GCGAACCAATTCC TGATTAATTGACCCT Shewmr7_3601 4282876 - 4282025 - | regulatory protein AmpE TERM 5377 4282292 - 4282282 - G 72 -8.2 -3.88998 | AGCCAAAGGAAAACA CCCG GCT CGGG ATCCAATCTAGGACA Shewmr7_3602 4283493 - 4282954 - | N-acetyl-anhydromuranmyl-L-alanine amidase Shewmr7_3603 4283745 - 4284638 + | nicotinate-nucleotide pyrophosphorylase [carboxylating] TERM 5378 4284703 - 4284722 + F 91 -8.6 -4.58685 | opp_overlap 4284703 4284718 4284719, overlap 4284718 4284719 CCTACCCAACTTAAA GCGGCTTA ATAT TAAGTCGC TTTTTCAGCGAGTTT Shewmr7_3604 4285870 - 4286322 + | methylation site containing protein TERM 5379 4286343 - 4286378 + F 88 -3.4 -5.83226 | gap 1, opp_overlap 4286343 TGCGAGCAAATTAAG CCGTACCTTTTGTATGT TTG AAAAATAAA-GGTACGG TTTTTTTATTGAGTT Shewmr7_3605 4286399 - 4288108 + | type IV-A pilus assembly ATPase PilB TERM 5380 4288398 - 4288384 - g 74 -7 -4.41047 | overlap 4288371 AGTGGCGAATTAAAA GGCGCC AGT GTCGCC GAGGTCAAAAGCCAA TERM 5381 4288709 - 4288744 + G 80 -11.9 -3.35046 | overlap 4288707 4288710 TCTACGTCGACTTAG TGGCAGCGGGTGAAC ACTCAG GTTCACTCGATGCCG TGTTTGACCGAATCG TERM 5382 4288710 - 4288743 + G 78 -13.2 -2.60813 | overlap 4288709 4288707 CTACGTCGACTTAGT GGCAGCGGGTGAAC ACTCAG GTTCACTCGATGCC GTGTTTGACCGAATC TERM 5383 4289205 - 4289223 + G 70 -8.8 -3.63515 | GGGAGCCTCTGGCAA CGCGGTTT ATC GAGCCGCG TTATTAAAAGTACGC Shewmr7_3606 4288255 - 4289520 + | type II secretion system protein TERM 5384 4289562 - 4289550 - f 86 -2.7 -5.89921 | ATTAGAATAAAAAAA TCTAG TGA CTAAA AACTAATGTCAGACT Shewmr7_3607 4289568 - 4290494 + | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A TERM 5385 4290617 - 4290644 + G 91 -11.4 -4.41348 | GTCTAACGGGTGGCA TTGGTAGCGGTA AAAC TACCGTTGCCAA TTTATTTGCCGAAGA TERM 5386 4291156 - 4291140 - g 75 -10.9 -3.40546 | overlap 4291138 AAAACTAAAGCAAGA GGTGCAA GCA TTGCACC AGCGCTATTTACAAT Shewmr7_3608 4290583 - 4291200 + | dephospho-CoA kinase Shewmr7_3609 4291193 - 4291927 + | hypothetical protein Shewmr7_3610 4292050 - 4292259 + | hypothetical protein Shewmr7_3611 4292294 - 4292692 + | mutator MutT protein Shewmr7_3612 4292841 - 4293377 + | hypothetical protein TERM 5387 4293430 - 4293393 - T 100 -14.3 -3.68351 | opp_overlap 4293395 4293399, overlap 4293395 4293399 TCTCGAGTAGCTAAA TATAAAGGCCGCCAAGT GTAA ACTTCGCGGCCTTTATT ATTTTAAAATGGATT TERM 5388 4293428 - 4293395 - T 100 -16.9 -3.42395 | opp_overlap 4293395 4293399, overlap 4293393 4293399 TCGAGTAGCTAAATA TAAAGGCCGCCAAGT GTAA ACTTCGCGGCCTTTA TTATTTTAAAATGGA TERM 5389 4293395 - 4293428 + T 100 -16.9 -4.19746 | opp_overlap 4293395 4293393 4293399, overlap 4293399 TCGAGTAGCTAAATA TAAAGGCCGCCAAGT GTAA ACTTCGCGGCCTTTA TTATTTTAAAATGGA TERM 5390 4293399 - 4293424 + T 100 -13.3 -4.67697 | opp_overlap 4293395 4293393 4293399, overlap 4293395 GTAGCTAAATATAAA GGCCGCCAAGT GTAA ACTTCGCGGCC TTTATTATTTTAAAA TERM 5391 4293424 - 4293399 - T 100 -13.3 -4.35044 | opp_overlap 4293399 4293395, overlap 4293395 4293393 GTAGCTAAATATAAA GGCCGCCAAGT GTAA ACTTCGCGGCC TTTATTATTTTAAAA Shewmr7_3613 4294377 - 4293451 - | Ppx/GppA phosphatase Shewmr7_3614 4295697 - 4294378 - | ATP-dependent RNA helicase RhlB TERM 5392 4294477 - 4294491 + g 70 -9.2 -3.63266 | overlap 4294475 CTCACGTAAATTGCG CGCCCC AGC GGGGTG TTTGCGATGAATTTT TERM 5393 4294935 - 4294920 - G 76 -6.1 -4.61482 | opp_overlap 4294920 4294919 TGTTTGAAAAAACAA TGGCC TTCTCG GGCCA ATCTTCTTCAATCAA Shewmr7_3615 4295850 - 4296176 + | thioredoxin TERM 5394 4296747 - 4296733 - g 71 -7.2 -4.07568 | opp_overlap 4296733, overlap 4296738 TTTGCCCTGCTAAAA GTTAAC GAA GTTAAC TTCGATAAACCCGAA rho 4296388 - 4297653 + | transcription termination factor Rho TERM 5395 4297678 - 4297692 + T 100 -8.5 -5.4756 | opp_overlap 4297678 CATCTTCCACGGAAA GCCGC TTAAT GCGGC TTTTTTATTGCGCTT TERM 5396 4297692 - 4297678 - T 73 -8.5 -3.6502 | opp_overlap 4297678 CATCTTCCACGGAAA GCCGC TTAAT GCGGC TTTTTTATTGCGCTT Shewmr7_3617 4298754 - 4297837 - | LysR family transcriptional regulator Shewmr7_3618 4298872 - 4299894 + | NADPH:quinone reductase Shewmr7_3619 4299891 - 4300175 + | antibiotic biosynthesis monooxygenase TERM 5397 4300184 - 4300214 + T 86 -12.1 -3.05463 | gap 1, opp_overlap 4300191, overlap 4300185 4300191 CTGTTAAGACCCACA CA-AAAAAGCGCCT ACGA AGGCGCTTTTTATG TTGAATCAAACAGCT TERM 5398 4300185 - 4300212 + T 84 -11.4 -3.08679 | opp_overlap 4300191, overlap 4300184 4300191 TGTTAAGACCCACAC AAAAAAGCGCCT ACGA AGGCGCTTTTTA TGTTGAATCAAACAG TERM 5399 4300191 - 4300206 + T 100 -10.4 -5.10767 | opp_overlap 4300191, overlap 4300185 4300184 GACCCACACAAAAAA GCGCCT ACGA AGGCGC TTTTTATGTTGAATC TERM 5400 4300206 - 4300191 - T 100 -10.4 -5.38047 | opp_overlap 4300191 4300185 4300184 GACCCACACAAAAAA GCGCCT ACGA AGGCGC TTTTTATGTTGAATC sdhB 4300970 - 4300239 - | fumarate reductase iron-sulfur subunit Shewmr7_3621 4302976 - 4300970 - | fumarate reductase flavoprotein subunit Shewmr7_3622 4303709 - 4303038 - | fumarate reductase respiratory complex, transmembrane subunit TERM 5401 4303816 - 4303797 - R 71 -2.2 -5.19261 | gap 1 AAATCCATCAAAAAA CCTGAGTTA GAT CAACT-AGG AGGCGAATAATTAAT TERM 5402 4303903 - 4303863 - R 70 -2.6 -4.9138 | gap 2, overlap 4303849 4303865 AGCAGCGAAACAAAA TCCTGCTGCGCCCAATTCCA TTA TGGT-TTG-GCGCAGCACTA GAGTTTCACATCAAT Shewmr7_3623 4304639 - 4303914 - | fumarate reductase cytochrome b-556 subunit prmA 4305082 - 4305963 + | ribosomal protein L11 methyltransferase TERM 5403 4305993 - 4305971 - f 100 -13.4 -3.74238 | opp_overlap 4305971, overlap 4305954 4305964 4305972 GCAAATAACGCTAAA GGGTGGCGCA ACA TGCGCCACCA CTGGCTTAGGCTTAT TERM 5404 4305971 - 4305994 + F 90 -13.2 -2.55818 | gap 1, opp_overlap 4305954 4305971 4305964 4305972 GCAAATAACGCTAAA G-GGTGGCGCA ACA TGCGCCACCAC TGGCTTAGGCTTATT TERM 5405 4305992 - 4305972 - f 100 -16.9 -2.8382 | opp_overlap 4305971, overlap 4305954 4305971 4305964 CAAATAACGCTAAAG GGTGGCGCA ACA TGCGCCACC ACTGGCTTAGGCTTA TERM 5406 4306108 - 4306094 - f 74 -4.2 -5.07486 | opp_overlap 4306094, overlap 4306096 4306105 CACGGCCAATAAAAA GGGCTA CTA TAGCGC CCCTTTGAAGAGCTA Shewmr7_3625 4306138 - 4307106 + | nifR3 family TIM-barrel protein Shewmr7_3626 4307123 - 4307428 + | helix-turn-helix, Fis-type TERM 5407 4307459 - 4307480 + F 100 -14.5 -5.46129 | opp_overlap 4307459 CTGTTGTATTGAAAA GGCGAGTCA GCAA TGACTCGCC TTTTTTGCTTTATTA TERM 5408 4307480 - 4307459 - f 100 -14.5 -4.18018 | opp_overlap 4307459 CTGTTGTATTGAAAA GGCGAGTCA GCAA TGACTCGCC TTTTTTGCTTTATTA Shewmr7_3627 4307682 - 4308428 + | hemerythrin HHE cation binding domain-containing protein TERM 5409 4308476 - 4308449 - f 100 -18.6 -3.35798 | opp_overlap 4308449 4308453, overlap 4308453 ACTGCTGATTCACAA CAAAGGCCAGCA CAAC TGCTGGCCTTTG TTATTTTGGCGTGTT TERM 5410 4308449 - 4308476 + F 100 -18.6 -4.2142 | opp_overlap 4308449 4308453, overlap 4308453 ACTGCTGATTCACAA CAAAGGCCAGCA CAAC TGCTGGCCTTTG TTATTTTGGCGTGTT TERM 5411 4308472 - 4308453 - f 100 -13.6 -4.33417 | opp_overlap 4308449 4308453, overlap 4308449 CTGATTCACAACAAA GGCCAGCA CAAC TGCTGGCC TTTGTTATTTTGGCG TERM 5412 4308453 - 4308472 + F 100 -13.6 -4.67697 | opp_overlap 4308453 4308449, overlap 4308449 CTGATTCACAACAAA GGCCAGCA CAAC TGCTGGCC TTTGTTATTTTGGCG Shewmr7_3628 4308527 - 4309030 + | putative transcriptional regulator Shewmr7_3629 4309613 - 4309035 - | HupE/UreJ protein Shewmr7_3630 4310483 - 4309761 - | HAD family hydrolase Shewmr7_3631 4311382 - 4310483 - | tyrosine recombinase XerC Shewmr7_3632 4312066 - 4311431 - | hypothetical protein TERM 5413 4311841 - 4311858 + g 79 -7.7 -4.4634 | CATTACGCGCAGCCA TCGCCAG CAGA CTGGTGA TTTCTTCTTCGAGTT dapF 4312890 - 4312063 - | diaminopimelate epimerase Shewmr7_3634 4314205 - 4312961 - | diaminopimelate decarboxylase TERM 5414 4313293 - 4313321 + g 76 -5.2 -4.88918 | overlap 4313296 AGTCGTTCATCGCGC CGTCGACAATCG CAAAA CGCTTGTCGCTG TTTTCTTTAAGATAC Shewmr7_3635 4314442 - 4314248 - | hypothetical protein Shewmr7_3636 4314510 - 4314839 + | frataxin family protein cyaA 4317293 - 4314879 - | adenylate cyclase TERM 5415 4317466 - 4317449 - H 74 -9.9 -3.16492 | overlap 4317447 TTACATTCACGAATA GCCAATG TTAG CATTGGC GCAACTAAGATCTCG hemC 4317496 - 4318428 + | porphobilinogen deaminase Shewmr7_3639 4318475 - 4319173 + | uroporphyrinogen III synthase HEM4 Shewmr7_3640 4319234 - 4320475 + | protein of unknown function DUF513, hemX TERM 5416 4320673 - 4320689 + G 76 -7.9 -4.36914 | opp_overlap 4320672 4320673, overlap 4320675 ATCACTGTGATAAAT CTGCTGC TTC GCAGCCG TTTTATCCCGCAGCA TERM 5417 4320882 - 4320872 - g 76 -3.2 -5.17488 | overlap 4320873 4320874 AACATCAAAATAAAA TCGC CGA ACGA GATCAATATCTTGCC Shewmr7_3641 4320472 - 4321638 + | HemY domain-containing protein TERM 5418 4321976 - 4321993 + F 77 -8.5 -4.01564 | TCACTTGTATCACTA TCCAACA CATT TGTTGGA TTTGTGCATCTTTTG TERM 5419 4324351 - 4324319 - g 73 -10.5 -3.22448 | overlap 4324309 4324321 ATCAAGATCGATGAA GACGGCGATGGCAAC ACC GTGGCCATCACCAGC ATCACCCAAGACACC TERM 5420 4324349 - 4324321 - g 77 -11.7 -3.17206 | overlap 4324319 4324309 CAAGATCGATGAAGA CGGCGATGGCAAC ACC GTGGCCATCACCA GCATCACCCAAGACA TERM 5421 4325078 - 4325047 - g 73 -10.2 -3.21925 | overlap 4325053 4325055 AGACTTTATTACCAA CGACAACACCTTAG TATT CCAAGGTACCGTCG AATTGGATGGCAACA TERM 5422 4326809 - 4326832 + G 70 -8 -3.70902 | opp_overlap 4326785, overlap 4326785 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5423 4327184 - 4327207 + G 70 -8 -3.70902 | opp_overlap 4327160, overlap 4327160 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5424 4327559 - 4327582 + G 70 -8 -3.70902 | opp_overlap 4327535, overlap 4327535 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5425 4327934 - 4327957 + G 70 -8 -3.70902 | GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5426 4328309 - 4328332 + G 70 -8 -3.70902 | opp_overlap 4328285, overlap 4328285 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5427 4328684 - 4328707 + G 70 -8 -3.70902 | opp_overlap 4328660, overlap 4328660 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5428 4329059 - 4329082 + G 70 -8 -3.70902 | opp_overlap 4329035, overlap 4329035 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5429 4329434 - 4329457 + G 70 -8 -3.70902 | opp_overlap 4329410, overlap 4329410 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5430 4329608 - 4329594 - g 76 -12.8 -2.63631 | CCAAGGTTGACACCA CCGCCG ATG CGGCGG CCCCAGTGGTCACCA TERM 5431 4329809 - 4329832 + G 70 -8 -3.70902 | opp_overlap 4329785, overlap 4329785 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5432 4330184 - 4330207 + G 70 -8 -3.70902 | opp_overlap 4330160, overlap 4330160 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5433 4330358 - 4330344 - g 76 -12.8 -2.63631 | CCAAGGTTGACACCA CCGCCG ATG CGGCGG CCCCAGTGGTCACCA TERM 5434 4330559 - 4330582 + G 70 -8 -3.70902 | opp_overlap 4330535, overlap 4330535 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5435 4330934 - 4330957 + G 70 -8 -3.70902 | opp_overlap 4330910, overlap 4330910 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5436 4331309 - 4331332 + G 70 -8 -3.70902 | opp_overlap 4331285, overlap 4331285 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5437 4331684 - 4331707 + G 70 -8 -3.70902 | opp_overlap 4331660, overlap 4331660 GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC TERM 5438 4332059 - 4332082 + G 70 -8 -3.70902 | GGCGTGCTGACCTTC GCCGACGGCA CCCC TGCCACCGGC TTTAGCTATAACAAC Shewmr7_3642 4321997 - 4336372 + | putative outer membrane adhesin like protein TERM 5439 4336416 - 4336380 - f 86 -11.8 -3.02371 | gap 1, opp_overlap 4336378 4336400, overlap 4336377 4336400 TTCCTTAAACAATCA GTTCATG-TGGCCTATA GAAA TATAGGCCATCATGACC CATACTTCTGATAAT TERM 5440 4336536 - 4336485 - g 76 -5.3 -4.84761 | opp_overlap 4336485 4336488 ACAGCCTCAGAAAAA GTTGAGCAGTGGACTATT-TCCGCT TCAC AGCGGGTAATAGTCGACC-CTCTAC TTGATTGTTTAGTGT TERM 5441 4336605 - 4336623 + G 74 -8.1 -4.08064 | overlap 4336598 4336597 TCACTTGCGGCAGGT CTGCCCT TGTCT GGGGCAG TTTTAACACCAGATT Shewmr7_3643 4336461 - 4338638 + | ABC transporter related TERM 5442 4339326 - 4339316 - g 86 -6.8 -5.02074 | overlap 4339318 CCACTTGCCAAAAAA GGCA TCG TGCC CGAAGTCGAATTACT Shewmr7_3644 4338635 - 4340017 + | HlyD family type I secretion membrane fusion protein Shewmr7_3645 4340044 - 4341459 + | TolC family type I secretion outer membrane protein Shewmr7_3646 4341507 - 4342064 + | OmpA/MotB domain-containing protein TERM 5443 4342393 - 4342403 + G 71 -6.8 -4.18488 | CAAACTATTGGGCCA CTCC GAT GGAG TTTATTGGCGTAAAT Shewmr7_3647 4342083 - 4342790 + | hypothetical protein Shewmr7_3648 4342799 - 4344718 + | diguanylate cyclase/phosphodiesterase TERM 5444 4344735 - 4344758 + F 100 -14 -3.90744 | opp_overlap 4344739 TCGAATATGTTTGCA TTAAGGCTCC TTAG GGAGCCTTAA TTATTTGAGCGGGAA TERM 5445 4344754 - 4344739 - f 77 -10.4 -3.14683 | opp_overlap 4344735 ATATGTTTGCATTAA GGCTCC TTAG GGAGCC TTAATTATTTGAGCG TERM 5446 4344896 - 4344867 - f 90 -5.7 -5.4492 | gap 1, opp_overlap 4344867 GACAGATACAAAAAA GCCCCAGTGATCCC TAA GGAATT-CTGAGGC TTCAATGTAATTGGT TERM 5447 4345707 - 4345692 - g 70 -2.5 -5.055 | TGAACGCTTAAAAAA GAGAC TTAATC GCCTC AAATATTTGGCGCAT TERM 5448 4346906 - 4346887 - g 80 -3.4 -5.24416 | opp_overlap 4346887 4346901, overlap 4346881 4346889 GAATTAGAAGAAAAA GTCGCGGC ACGC ACCACGGC TCTTGCCGAGTTGAA TERM 5449 4347868 - 4347879 + G 86 -5.8 -5.14563 | overlap 4347864 AAGCTTGCGCTGCCA CAGC TATG GCTG TTTTTTAATGAAAAG TERM 5450 4348190 - 4348220 + G 88 -3.8 -5.55769 | overlap 4348188 4348192 ACGCATTAGGTTATC GCTTTGGCCAAGGC GGT GCCTTAGCCTCACC TTTTTTATTGTCAGA Shewmr7_3649 4345630 - 4348260 + | diguanylate cyclase/phosphodiesterase with GAF sensor TERM 5451 4348263 - 4348296 + T 100 -15.5 -4.61231 | opp_overlap 4348266 4348270 GGTCTGTGCCTGAAT GCAGTAATCACATGA TGAA TCTTGTGATTACTGC TTTTTAAACATATCC TERM 5452 4348293 - 4348266 - T 70 -10 -2.52464 | opp_overlap 4348263, overlap 4348270 CTGTGCCTGAATGCA GTAATCACATGA TGAA TCTTGTGATTAC TGCTTTTTAAACATA Shewmr7_3650 4350305 - 4348290 - | ATP-dependent DNA helicase Rep Shewmr7_3651 4350521 - 4350775 + | hypothetical protein TERM 5453 4350798 - 4350824 + F 100 -9.5 -5.93252 | gap 1, opp_overlap 4350796 4350798 TGCATGTTTGAAAGA GCACAGTTAGCG ATAG CGC-AGCTGTGC TTTTTTGTTTTTAAC Shewmr7_3652 4350870 - 4351202 + | hypothetical protein Shewmr7_3653 4351261 - 4351626 + | hypothetical protein Shewmr7_3654 4352789 - 4351623 - | hypothetical protein TERM 5454 4353075 - 4353090 + G 74 -4.7 -4.76041 | CCGCAAAACTGGCAA TGGCA CTAAGC TGCCA TTTTTGATGAATATG Shewmr7_3655 4353025 - 4353552 + | hypothetical protein TERM 5455 4353603 - 4353634 + F 79 -8.1 -4.25104 | gap 1, opp_overlap 4353606 4353607, overlap 4353606 4353607 GCCACTATTGATCAG CA-ACTTGCCCGCA ATTCC TGCGGGCAAATCTG TTTTAATACCCACCG TERM 5456 4353606 - 4353630 + F 78 -10 -3.44672 | opp_overlap 4353606 4353607, overlap 4353603 4353607 ACTATTGATCAGCAA CTTGCCCGCA ATTCC TGCGGGCAAA TCTGTTTTAATACCC TERM 5457 4353630 - 4353606 - f 95 -12.9 -3.22476 | opp_overlap 4353606 4353603 4353607, overlap 4353607 ACTATTGATCAGCAA CTTGCCCGCAA TTC CTGCGGGCAAA TCTGTTTTAATACCC TERM 5458 4353629 - 4353607 - f 93 -14.2 -2.53164 | opp_overlap 4353606 4353603 4353607, overlap 4353606 CTATTGATCAGCAAC TTGCCCGCAA TTC CTGCGGGCAA ATCTGTTTTAATACC TERM 5459 4353607 - 4353629 + F 93 -13.5 -2.66321 | opp_overlap 4353607 4353606, overlap 4353606 4353603 CTATTGATCAGCAAC TTGCCCGCA ATTCC TGCGGGCAA ATCTGTTTTAATACC Shewmr7_3656 4353715 - 4355187 + | hypothetical protein TERM 5460 4355213 - 4355241 + F 100 -9.5 -5.7946 | opp_overlap 4355212, overlap 4355214 TCCACCCTTGAAGAC CCCCGACAGCGCA CTT TTTGCTGTCGGGA TTTTTTTATTGGCAA TERM 5461 4355214 - 4355240 + F 100 -13 -4.06592 | opp_overlap 4355212, overlap 4355213 CCACCCTTGAAGACC CCCGACAGCGCA CTT TTTGCTGTCGGG ATTTTTTTATTGGCA Shewmr7_3657 4355263 - 4356078 + | phosphatidylglycerophosphatase TERM 5462 4356120 - 4356146 + T 100 -8.7 -4.82901 | ACTCAGCGCGACAGG CGGCATCTGCA ACTTA TGTCGATGCCG TTTTTATCAGGAAGC Shewmr7_3658 4356714 - 4356181 - | hypothetical protein TERM 5463 4357314 - 4357330 + r 81 -9.4 -3.86897 | opp_overlap 4357314 TGTCTTTATAAAAAA TCCCCG CATTA CGGGGA TTTATAAACCATCAA TERM 5464 4357330 - 4357314 - R 100 -10.1 -5.24129 | opp_overlap 4357314 TGTCTTTATAAAAAA TCCCCGC ATT ACGGGGA TTTATAAACCATCAA Shewmr7_3659 4357659 - 4357366 - | hypothetical protein Shewmr7_3660 4358794 - 4357661 - | alanine-glyoxylate aminotransferase TERM 5465 4358881 - 4358904 + r 70 -8 -3.62418 | opp_overlap 4358884, overlap 4358884 ACCAAACTACCACAA AAAGGGGCGC CTGT GCGCCCCTCC TTTAGCCTAAGTTGT TERM 5466 4358884 - 4358901 + r 100 -14.1 -2.92792 | opp_overlap 4358884, overlap 4358881 AAACTACCACAAAAA GGGGCGC CTGT GCGCCCC TCCTTTAGCCTAAGT TERM 5467 4358901 - 4358884 - R 100 -14.1 -4.95806 | opp_overlap 4358884 4358881 AAACTACCACAAAAA GGGGCGC CTGT GCGCCCC TCCTTTAGCCTAAGT Shewmr7_3661 4360610 - 4358937 - | threonine dehydratase TERM 5468 4359464 - 4359451 - G 70 -2.3 -4.92314 | opp_overlap 4359461, overlap 4359452 AGCAACTCACAAAAA CGCAG GAAG CTGCC GGGACGCTCGGGCAC TERM 5469 4359994 - 4360006 + g 74 -7.7 -4.16016 | overlap 4359992 ACTTCAAGGTCGCGC TGCTG TTG CAGCA TTTCTTGGGCGATAG Shewmr7_3662 4362471 - 4360612 - | dihydroxy-acid dehydratase TERM 5470 4361643 - 4361671 + g 70 -9.6 -3.30635 | gap 1, opp_overlap 4361633 4361642 4361643 CAGTATTGGACGAAC CGCCCATGGCGAT ATCC AGCGCCATGG-CG TTCTCAAAGGCTTTA TERM 5471 4362097 - 4362049 - G 77 -8.9 -4.03234 | gap 1, opp_overlap 4362048 4362049 CCCGCCCGACACAAA CACCACGGGGATATTGA-GGCG CAGCGC CGCCATCAACATGCCGGGGGTG ATTTTGTCGCAGTTA ilvM 4362812 - 4362552 - | acetolactate synthase 2 regulatory subunit Shewmr7_3664 4364464 - 4362809 - | acetolactate synthase 2 catalytic subunit TERM 5472 4364573 - 4364621 + r 74 -6.6 -4.28049 | gap 1, opp_overlap 4364548 4364577, overlap 4364581 4364584 AAAACCTAGGGCCTG AAAACG-AAGAACCCCCCGGTCC TTTC GGAGCGGGGGGTTCTTTCGAAAC TTTTAACCTTTTAGG TERM 5473 4364617 - 4364577 - R 100 -20.6 -4.08767 | gap 1, opp_overlap 4364573 4364581 4364584, overlap 4364548 CCTAGGGCCTGAAAA CG-AAGAACCCCCCGGTCC TTTC GGAGCGGGGGGTTCTTTCG AAACTTTTAACCTTT TERM 5474 4364581 - 4364612 + r 100 -20.2 -3.60818 | opp_overlap 4364577, overlap 4364573 4364584 GGGCCTGAAAACGAA GAACCCCCCGGTCC TTTC GGAGCGGGGGGTTC TTTCGAAACTTTTAA TERM 5475 4364584 - 4364609 + r 100 -16.1 -3.92832 | opp_overlap 4364577, overlap 4364581 4364573 CCTGAAAACGAAGAA CCCCCCGGTCC TTTC GGAGCGGGGGG TTCTTTCGAAACTTT TERM 5476 4365034 - 4365064 + r 79 -11.1 -2.95091 | overlap 4365052 GGAATAAATTTGTCA CGCCGAGCCCC ACATCCTTA GGGGCTCGGCC TCTATCAATTAAGCT Shewmr7_3665 4366551 - 4365073 - | ketol-acid reductoisomerase TERM 5477 4366678 - 4366702 + H 72 -6.5 -4.27316 | overlap 4366681 GATATATTCGAAACC TCACATTGCGT TTT ATGCAATGTCA TTTTCGGTTACAACA Shewmr7_3666 4366748 - 4367620 + | DNA-binding transcriptional regulator IlvY TERM 5478 4367631 - 4367669 + T 100 -18.4 -3.1886 | opp_overlap 4367643, overlap 4367643 TCTAAATTTTAGTAG CGACATAAAAAACGGGAC TGA GTCCCGTTTTTTATGATG TTGATAAGATTAGGT TERM 5479 4367657 - 4367643 - T 100 -11.4 -5.38047 | opp_overlap 4367631 4367643 TAGCGACATAAAAAA CGGGAC TGA GTCCCG TTTTTTATGATGTTG TERM 5480 4367643 - 4367657 + T 100 -11.4 -5.36965 | opp_overlap 4367643, overlap 4367631 TAGCGACATAAAAAA CGGGAC TGA GTCCCG TTTTTTATGATGTTG Shewmr7_3667 4368995 - 4367679 - | hypothetical protein Shewmr7_3668 4369167 - 4370006 + | amino acid ABC transporter periplasmic protein Shewmr7_3669 4370382 - 4369969 - | hypothetical protein Shewmr7_3670 4372324 - 4370498 - | diguanylate cyclase Shewmr7_3671 4373369 - 4372344 - | periplasmic binding protein/LacI transcriptional regulator TERM 5481 4373307 - 4373289 - G 73 -3.1 -5.00884 | ACCTGGGTTAAAAAA GGCCA CCTCTAATT TGGCC CATGCAGGCGACGTG TERM 5482 4375705 - 4375687 - g 79 -8.8 -4.13767 | TGGCCGAGCTGAAAA TCGCCGAC CTT GTCCGCGA TCAGGCGCTCATCCC Shewmr7_3672 4373736 - 4375826 + | ATP-dependent DNA helicase RecG Shewmr7_3673 4376005 - 4376901 + | hypothetical protein TERM 5483 4376936 - 4376922 - f 87 -8.5 -4.57073 | opp_overlap 4376922 TATCTCCTCTAAAAA GGCGC CTCGT GCGCC TTTTTTACATGCAAA TERM 5484 4376922 - 4376936 + F 100 -8.5 -5.08824 | opp_overlap 4376922 TATCTCCTCTAAAAA GGCGC CTCGT GCGCC TTTTTTACATGCAAA Shewmr7_3674 4377259 - 4377996 + | hypothetical protein TERM 5485 4378681 - 4378661 - g 72 -8.3 -3.93401 | overlap 4378674 TTGACAAAGGAACAA CCTTGGTAT GAG ATCCCAAGG CAAACCATGGGAATG Shewmr7_3675 4377989 - 4378837 + | phospholipid/glycerol acyltransferase Shewmr7_3676 4378824 - 4379078 + | acyl carrier protein, putative Shewmr7_3677 4379088 - 4379336 + | acyl carrier protein Shewmr7_3678 4379336 - 4379884 + | hypothetical protein Shewmr7_3679 4379881 - 4381245 + | hypothetical protein Shewmr7_3680 4381238 - 4381612 + | thioester dehydrase family protein TERM 5486 4383310 - 4383278 - g 78 -12.8 -2.96274 | opp_overlap 4383277 4383278 4383292 4383294, overlap 4383273 4383297 CGGTGTACAACTACA GCTCACGCCTCG AACACTACG CAAGGCGTGAGC CTTTGCAGTGGTTTA TERM 5487 4383414 - 4383394 - g 71 -11.1 -2.74598 | overlap 4383391 4383386 CCACAAACGACAGCA GCACTCCCG GAG CAGGAGCGC ACTACAGACAGGACA Shewmr7_3681 4381609 - 4383441 + | glycosyl transferase family protein Shewmr7_3682 4383438 - 4385003 + | histidine ammonia-lyase Shewmr7_3683 4385000 - 4385434 + | thioesterase superfamily protein Shewmr7_3684 4385431 - 4386249 + | hypothetical protein TERM 5488 4386306 - 4386338 + G 77 -9.9 -3.78775 | opp_overlap 4386306 4386316, overlap 4386308 4386311 4386316 TAGCCTGATGCAAAC CTCGACTAAATGGCG CTT CGCTATTTGGTTGTG TTTGATGCTGGCGGC TERM 5489 4386308 - 4386336 + G 77 -11.1 -3.48024 | opp_overlap 4386306 4386316, overlap 4386306 4386311 4386316 GCCTGATGCAAACCT CGACTAAATGGCG CTT CGCTATTTGGTTG TGTTTGATGCTGGCG TERM 5490 4386311 - 4386333 + G 75 -9.2 -3.87323 | opp_overlap 4386306 4386316, overlap 4386308 4386306 4386316 TGATGCAAACCTCGA CTAAATGGCG CTT CGCTATTTGG TTGTGTTTGATGCTG TERM 5491 4388663 - 4388694 + G 74 -7.4 -4.13654 | gap 1, overlap 4388642 4388682 CTATTCATTATTTTG GGTTAACTCTAT-CC CTC GGCATAGGGTTTACC TTTGTACTTTCGCCA Shewmr7_3685 4386259 - 4388778 + | hypothetical protein TERM 5492 4389053 - 4389033 - g 73 -3.2 -4.91511 | gap 1, overlap 4389035 ATTCCAGTATAAAAA TGGCG-CGG CATT CCGTCGCGA TGGGGTGTATACCAC TERM 5493 4389882 - 4389898 + G 73 -2.9 -5.0133 | GGCTTGGTACGATGG TCGCTTC CAA GATGTGA TTTTTTACGAAAATC TERM 5494 4389946 - 4389926 - g 71 -6.9 -4.19506 | opp_overlap 4389926 4389941, overlap 4389931 ATCCGAATCCTAAAA TCAAACAGA TGA TCTGCTCGA TTTTGGCGGGCTATG Shewmr7_3686 4388779 - 4390086 + | monooxygenase, FAD-binding protein Shewmr7_3687 4390091 - 4390831 + | hypothetical protein Shewmr7_3688 4390928 - 4392151 + | 3-oxoacyl-(acyl carrier protein) synthase I Shewmr7_3689 4392157 - 4392696 + | thioester dehydrase family protein TERM 5495 4392747 - 4392733 - f 70 -7.8 -3.60792 | GCGCCAAGCTTTAAA CCGACG CAA CGTCAG TCGTACTACAAAAGG fabG 4392822 - 4393547 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 5496 4393993 - 4394013 + G 70 -2.4 -4.99568 | GCATGATGGCACACA CCACTGCG GTAAA CGTGGGGG TTTTCTTTGGTCTTA Shewmr7_3691 4393548 - 4394801 + | 3-oxoacyl-(acyl carrier protein) synthase II Shewmr7_3692 4394812 - 4395555 + | hypothetical protein TERM 5497 4395588 - 4395605 + F 100 -11.3 -4.71382 | opp_overlap 4395588 AAACGTTAACAAAAA GCCGAGA ATCA TCTCGGC TTTTTAGCTCATTGT TERM 5498 4395605 - 4395588 - f 100 -11.3 -5.11112 | opp_overlap 4395588 AAACGTTAACAAAAA GCCGAGA ATCA TCTCGGC TTTTTAGCTCATTGT Shewmr7_3693 4395748 - 4395990 + | prevent-host-death family protein Shewmr7_3694 4395999 - 4396298 + | plasmid stabilization system protein Shewmr7_3695 4402460 - 4396746 - | hypothetical protein TERM 5499 4399540 - 4399552 + g 74 -7.7 -4.2586 | opp_overlap 4399540, overlap 4399548 ACTTTGGGACCAAAA CCTAC ACC GTAGG TTTCTCTTACTCTGA TERM 5500 4399552 - 4399540 - G 74 -7.7 -4.25283 | opp_overlap 4399540 4399548 ACTTTGGGACCAAAA CCTAC ACC GTAGG TTTCTCTTACTCTGA TERM 5501 4400393 - 4400375 - G 76 -6 -4.61633 | opp_overlap 4400374 4400375 ATAGAGCTTCAAAAA CCTCTC CACCAGC GAGAGG CTTTAGAGAATTGAG TERM 5502 4402963 - 4402943 - H 71 -4.6 -4.7254 | opp_overlap 4402928 4402943, overlap 4402946 4402947 ACTCTTGATTAAAAA TCAGGGGG TTAAT CCCCACGA CTTTGATTTTTATTT TERM 5503 4403054 - 4403027 - H 100 -12.2 -4.36914 | TGCCTCTCGATAAAA CTTAAGGAATGA AGCA TCATCCCTTAAG CAAAACTCTTGGCCT Shewmr7_3696 4403176 - 4403631 + | GCN5-related N-acetyltransferase Shewmr7_3697 4403869 - 4404465 + | electron transport protein SCO1/SenC TERM 5504 4404762 - 4404776 + G 70 -10 -3.22924 | opp_overlap 4404732, overlap 4404760 TGCACTTTCATATCT TCGCCA CTA TGGCGA TCTTCCTGATTTACC Shewmr7_3698 4404587 - 4405978 + | methyl-accepting chemotaxis sensory transducer Shewmr7_3699 4407217 - 4406021 - | benzoate transporter TERM 5505 4407228 - 4407286 + H 100 -10.6 -4.35085 | gap 1, opp_overlap 4407242, overlap 4407229 ATCATCTAACTCCTG CTTGTGCGCTATAACGCACGAGATG GACAAGATAG CATC-CGTGCGTTATAACGTACAAA TATTTTTTTAAGCGT TERM 5506 4407229 - 4407285 + H 100 -14.1 -3.19966 | gap 1, opp_overlap 4407242, overlap 4407228 TCATCTAACTCCTGC TTGTGCGCTATAACGCACGAGATG GACAAGATAG CATC-CGTGCGTTATAACGTACAA ATATTTTTTTAAGCG Shewmr7_3700 4407312 - 4407887 + | XRE family transcriptional regulator Shewmr7_3701 4407983 - 4408306 + | rhodanese domain-containing protein Shewmr7_3702 4408335 - 4408517 + | hypothetical protein TERM 5507 4408559 - 4408540 - T 100 -10 -5.38054 | opp_overlap 4408540 CTGCAGAAACAAAAA TGCCAGCA TTTA CGCTGGCA TTTTTTATTATCAAT TERM 5508 4408540 - 4408559 + T 100 -9.3 -5.56673 | opp_overlap 4408540 CTGCAGAAACAAAAA TGCCAGC ATTTAC GCTGGCA TTTTTTATTATCAAT Shewmr7_3703 4409175 - 4408579 - | azoreductase Shewmr7_3704 4409746 - 4409309 - | thioesterase domain-containing protein Shewmr7_3705 4410222 - 4409785 - | D-tyrosyl-tRNA deacylase TERM 5509 4410018 - 4410006 - G 74 -6.9 -4.33274 | GCGACACCACTAAAA GCGAG CCC CCCGC CTGAGTTAAGTTGAG TERM 5510 4410080 - 4410090 + g 72 -4 -4.76312 | overlap 4410075 CGATAACTCATCACT TTAG TGG CTAA TTTTTCCATCTTCTC Shewmr7_3706 4410840 - 4410238 - | hypothetical protein Shewmr7_3707 4411742 - 4410837 - | prolyl aminopeptidase rbn 4412869 - 4411856 - | ribonuclease BN Shewmr7_3709 4412951 - 4413172 + | hypothetical protein TERM 5511 4413300 - 4413289 - g 76 -5.8 -4.65895 | GGCGCCATGGAAAAA GTGG GCTA CCAC AAGCGCGACATCATG Shewmr7_3710 4413202 - 4413855 + | hypothetical protein TERM 5512 4414956 - 4414976 + G 72 -3.9 -4.78237 | GCTCTCGTGTTTGTG CTCGCCC TGTTAGT GGCCGAG TTTTGTTATGGCGTG Shewmr7_3711 4414119 - 4415834 + | diguanylate cyclase TERM 5513 4416377 - 4416361 - g 77 -10.9 -3.61178 | opp_overlap 4416360 4416364, overlap 4416364 GCTATCCAGCTTAAA CAAGGCA TAG TGCCTTG GTTGATGCGCCCCGA TERM 5514 4416821 - 4416845 + G 100 -12.1 -4.60889 | TTGCTCTTATCCTCG CCTTAGCGGCG TGG CGTCGCCAAGG TTTTTGCCGCTACTT Shewmr7_3712 4416010 - 4417257 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5515 4417310 - 4417291 - T 100 -13.6 -5.43414 | opp_overlap 4417291 AGTAGACATAAAAAA GGTGCAGC CCAA GCTGCACC TTTTTATTCACGATA TERM 5516 4417291 - 4417310 + T 100 -13.6 -5.07486 | opp_overlap 4417291 AGTAGACATAAAAAA GGTGCAGC CCAA GCTGCACC TTTTTATTCACGATA Shewmr7_3713 4419529 - 4417343 - | catalase/peroxidase HPI TERM 5517 4417937 - 4417951 + g 100 -7.8 -5.27477 | opp_overlap 4417937, overlap 4417914 4417912 GCCCAACACGATTAA GTCGGC GAT GCTGAC TTTTTTGCTTAGGCT TERM 5518 4418495 - 4418505 + g 100 -8.2 -5.53288 | TTCCCATTGCGAGGC GCCC GCT GGGC TTTTTTTCAATTCCC TERM 5519 4418593 - 4418629 + g 83 -3 -5.4505 | gap 3, overlap 4418613 TCCAAGCGCCTTCTA GGCCACTGGTCAC-GGC ATTTGC GCCAGTG-CCTG-GGCC TTTTTTGTTGAGCCA TERM 5520 4419380 - 4419396 + g 82 -6.5 -4.81814 | opp_overlap 4419381, overlap 4419381 GCGATAGTTAAACTT AGGATCC ATA GGATCCG TTTTCTTATCGTGCT TERM 5521 4419381 - 4419395 + g 72 -10 -3.48004 | opp_overlap 4419381, overlap 4419380 CGATAGTTAAACTTA GGATCC ATA GGATCC GTTTTCTTATCGTGC TERM 5522 4419858 - 4419838 - R 100 -9 -5.45652 | gap 1, opp_overlap 4419838 AGCTGTAATAAAAAA GCCGCACTG CTAA CAG-GCGGC TTAACTGGACAGACA Shewmr7_3714 4420961 - 4419885 - | alcohol dehydrogenase TERM 5523 4420156 - 4420172 + g 70 -8.7 -3.53444 | GCGGTGTGGATGCCC GTGACCA CTA TGGTCGC TTTGGCGGGAGCTCG Shewmr7_3715 4421478 - 4420972 - | hypothetical protein Shewmr7_3716 4422287 - 4421526 - | short-chain dehydrogenase/reductase SDR Shewmr7_3717 4422425 - 4423432 + | AraC family transcriptional regulator TERM 5524 4423690 - 4423655 - T 100 -17 -4.08872 | opp_overlap 4423660, overlap 4423660 AAATACATAAGTAAA CAAAAGCCCCGCCAAG TTAC CTTAGCGGGGCTTTTT TATTCACTGTGTGGC TERM 5525 4423685 - 4423660 - T 100 -16.9 -5.02357 | opp_overlap 4423660, overlap 4423655 CATAAGTAAACAAAA GCCCCGCCAAG TTAC CTTAGCGGGGC TTTTTTATTCACTGT TERM 5526 4423660 - 4423685 + T 100 -14.7 -5.49234 | opp_overlap 4423660 4423655 CATAAGTAAACAAAA GCCCCGCCAAG TTAC CTTAGCGGGGC TTTTTTATTCACTGT Shewmr7_3718 4425541 - 4423730 - | GTP-binding protein TypA TERM 5527 4426376 - 4426362 - H 88 -10 -4.23758 | ATGCCACACGCAAAA GCACCA ACA TGGTGC AACCCAAGGTTGTTT TERM 5528 4426376 - 4426388 + H 79 -7.7 -4.32177 | AGCACCAACATGGTG CAACC CAA GGTTG TTTGTTGTGCAATAA TERM 5529 4426894 - 4426877 - g 79 -5.5 -5.03314 | opp_overlap 4426861 TCTATCGCGAAAAAA GCGGAAG AATA CTTACGC TCTACCGGTATCGCT glnA 4426544 - 4427953 + | glutamine synthetase TERM 5530 4428016 - 4427989 - f 100 -17 -3.21726 | opp_overlap 4427989, overlap 4427982 4427984 CTGCACAACATCTAA CAGCCCCGACGG TCTT CTGTCGGGGCTG TTTTGTCTCTATCAC TERM 5531 4427989 - 4428016 + F 100 -19.2 -4.64844 | opp_overlap 4427989 4427982 4427984 CTGCACAACATCTAA CAGCCCCGACGG TCTT CTGTCGGGGCTG TTTTGTCTCTATCAC Shewmr7_3720 4428358 - 4430595 + | TonB-dependent siderophore receptor TERM 5532 4430697 - 4430666 - g 87 -12.5 -3.95621 | opp_overlap 4430673, overlap 4430673 AGCAAATGCCACAAA CAAAAAACGGTCC CCAAGT GGACCGTTTTTTA TGCATATGCATACAG TERM 5533 4430673 - 4430690 + G 100 -8.4 -5.29782 | opp_overlap 4430666 4430673 GCCACAAACAAAAAA CGGTCC CCAAGT GGACCG TTTTTTATGCATATG TERM 5534 4430690 - 4430673 - g 100 -8.4 -5.72622 | opp_overlap 4430673, overlap 4430666 GCCACAAACAAAAAA CGGTCC CCAAGT GGACCG TTTTTTATGCATATG Shewmr7_3721 4430623 - 4430922 + | hypothetical protein Shewmr7_3722 4431304 - 4432506 + | sodium:dicarboxylate symporter Shewmr7_3723 4432691 - 4433014 + | hypothetical protein TERM 5535 4433036 - 4433066 + T 74 -10.5 -2.68434 | opp_overlap 4433035 4433038, overlap 4433035 TCGCCAGCCATAAAT TACCTTAGCCTCA ACCCG TGAGGCTAAGGGG TAATGTCATATCGGC TERM 5536 4433064 - 4433038 - T 100 -15.3 -3.02745 | opp_overlap 4433036 4433035, overlap 4433035 GCCAGCCATAAATTA CCTTAGCCTCA ACCCG TGAGGCTAAGG GGTAATGTCATATCG Shewmr7_3724 4434276 - 4433152 - | aminotransferase, class V TERM 5537 4434094 - 4434081 - G 72 -3.7 -4.77036 | GCTGACCATTAAAAA GGCTC GCCA GCGCC GCGGTAAAGTTATCG Shewmr7_3725 4435459 - 4434281 - | hypothetical protein TERM 5538 4435640 - 4435655 + H 71 -9 -3.38178 | ACTTTTTATTTACAC CTTGCG CCAG CGCAAG TTCTCAAATTCATTC TERM 5539 4436129 - 4436115 - g 74 -2.1 -5.06414 | overlap 4436128 CGCCCTGAAGAAAAA CATTC GTCCA GAACG CCCCATGGCGGTGGC Shewmr7_3726 4435744 - 4437087 + | anaerobic C4-dicarboxylate transporter TERM 5540 4437149 - 4437109 - T 100 -12.2 -4.4715 | gap 1, opp_overlap 4437113 4437116, overlap 4437113 TTTGAAGCGATAAAA CACATAAGGCCGATAAC GTGAAAGG GTTATCGGCCTTAT-TG TTGAAACAAGTGAAA TERM 5541 4437113 - 4437146 + T 100 -14.1 -3.61715 | opp_overlap 4437109 4437113, overlap 4437116 AAGCGATAAAACACA TAAGGCCGATAAC GTGAAAGG GTTATCGGCCTTA TTGTTGAAACAAGTG TERM 5542 4437146 - 4437113 - T 100 -14.1 -3.49789 | opp_overlap 4437113 4437116, overlap 4437109 AAGCGATAAAACACA TAAGGCCGATAAC GTGAAAGG GTTATCGGCCTTA TTGTTGAAACAAGTG TERM 5543 4437116 - 4437143 + T 100 -11.4 -3.9461 | opp_overlap 4437113 4437109, overlap 4437113 CGATAAAACACATAA GGCCGATAAC GTGAAAGG GTTATCGGCC TTATTGTTGAAACAA Shewmr7_3727 4437777 - 4437166 - | TetR family transcriptional regulator TERM 5544 4437844 - 4437866 + H 100 -12.2 -4.44974 | opp_overlap 4437849 TTTGCACAGCCTTGA GTAAACTACA CTG TGTAGTTTAC TTTTATCAAGTTTAC Shewmr7_3728 4437931 - 4439001 + | hypothetical protein TERM 5545 4439016 - 4439048 + F 86 -12.1 -3.20367 | opp_overlap 4439013 GTCATAGAAGTATCT CCTTAGCGGCG CTTAATCAGTA CGCCGCTAAGG TTCCTCCACTTCTTA TERM 5546 4439483 - 4439465 - g 70 -4.5 -4.70583 | GTTATCAACATAAAA TGCCCGA CAGTT TCGGTCA CGCCAAAGACTTCTT Shewmr7_3729 4439191 - 4439904 + | CHAP domain-containing protein Shewmr7_3730 4439921 - 4440499 + | hypothetical protein Shewmr7_3731 4440521 - 4441033 + | peptidase M23B Shewmr7_3732 4441237 - 4441046 - | hypothetical protein Shewmr7_3733 4441542 - 4443713 + | TonB-dependent receptor TERM 5547 4443729 - 4443774 + F 100 -14.3 -3.56273 | opp_overlap 4443743, overlap 4443743 TTAACCTGCCCGATT TTCTGCATAAAAAAGCGCAAC CTAG GTTGCGCTTTTTTATTGAGGA TTGTCTAGTCCTGAA TERM 5548 4443743 - 4443760 + F 100 -11.3 -5.45652 | opp_overlap 4443743, overlap 4443729 TTTCTGCATAAAAAA GCGCAAC CTAG GTTGCGC TTTTTTATTGAGGAT TERM 5549 4443760 - 4443743 - f 100 -11.3 -5.24129 | opp_overlap 4443743 4443729 TTTCTGCATAAAAAA GCGCAAC CTAG GTTGCGC TTTTTTATTGAGGAT TERM 5550 4443827 - 4443791 - f 80 -10.3 -3.55444 | opp_overlap 4443790 4443793, overlap 4443793 4443794 TGTCTAGTCCTGAAA TACGTTGACATAAAGAG GAC CTCTTTATGACAACATC AATTAACTCAAGCCG TERM 5551 4443825 - 4443793 - f 100 -12.9 -3.35597 | opp_overlap 4443790 4443793, overlap 4443791 4443794 TCTAGTCCTGAAATA CGTTGACATAAAGAG GAC CTCTTTATGACAACA TCAATTAACTCAAGC TERM 5552 4443793 - 4443825 + F 76 -10.7 -2.54896 | opp_overlap 4443793 4443791 4443794, overlap 4443790 TCTAGTCCTGAAATA CGTTGACATAAAGAG GAC CTCTTTATGACAACA TCAATTAACTCAAGC TERM 5553 4443824 - 4443794 - f 95 -14.2 -2.61144 | opp_overlap 4443793 4443790, overlap 4443793 4443791 CTAGTCCTGAAATAC GTTGACATAAAGAG GAC CTCTTTATGACAAC ATCAATTAACTCAAG Shewmr7_3734 4443817 - 4444212 + | transposase TERM 5554 4444225 - 4444198 - f 71 -4 -4.8622 | opp_overlap 4444215, overlap 4444214 4444215 TCTGGCAAGCAAAAA GCAACGGCGAAA TAAA CCTCGCAGCCGC ATGTCGTGCTGCGGG TERM 5555 4444240 - 4444214 - f 76 -6.6 -4.43877 | opp_overlap 4444215, overlap 4444198 4444215 CAACGGCGAAATAAA CCTCGCAGC-CG CATGT CGTGCTGCG-GG TATGTCGAGGCAAGG TERM 5556 4444811 - 4444831 + G 79 -11.1 -3.54029 | opp_overlap 4444810 4444811 TCAGGCGAGCCAAAT CCAGCCGTC AAT GACGGATGG TTATGATTGCTACCA TERM 5557 4444831 - 4444811 - g 71 -11.1 -2.79327 | opp_overlap 4444811, overlap 4444810 TCAGGCGAGCCAAAT CCAGCCGTC AAT GACGGATGG TTATGATTGCTACCA Shewmr7_3735 4444242 - 4445045 + | integrase catalytic subunit TERM 5558 4445042 - 4445022 - T 100 -12.6 -4.73682 | GTGCACAATAGAAAA GGCCAGCT ACTGG AGCTGGCC TAAAAACTGTCAACC Shewmr7_3736 4445248 - 4445081 - | hypothetical protein TERM 5559 4445682 - 4445698 + G 77 -8.7 -4.05788 | TTATTATGTTACGTT GGGGTAC CCA GTACCTC TTTCGTTTAGAGCGC TERM 5560 4446017 - 4446028 + G 70 -4.4 -4.61147 | CGAGAGGAGGCGACA CCAA TGCT TTGG TTTTATGTCGTCTTC Shewmr7_3737 4445438 - 4446613 + | diguanylate cyclase Shewmr7_3738 4447296 - 4446610 - | pseudouridine synthase Rlu family protein Shewmr7_3739 4448564 - 4447329 - | periplasmic sensor signal transduction histidine kinase TERM 5561 4448149 - 4448137 - G 70 -3.4 -4.77173 | GCCTTAGAAAACAAA TAGC CCAGC GCTA AGGTTAACACTATGG Shewmr7_3740 4449312 - 4448635 - | two component transcriptional regulator Shewmr7_3741 4449882 - 4449361 - | hypothetical protein TERM 5562 4449939 - 4449962 + r 86 -6.7 -4.92363 | CAATCAGTTAGATGT CGATGGCGT GCCAAA ACCCCATCG TTTTTATCCCTGTTT Shewmr7_3742 4451558 - 4450455 - | ABC transporter related Shewmr7_3743 4452219 - 4451539 - | molybdate ABC transporter, inner membrane subunit Shewmr7_3744 4453031 - 4452228 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 5563 4452720 - 4452734 + g 73 -5.6 -4.60487 | TTGCACGCCAGCATC GCGGGT AAA GCCTGC TTTTTGCAGCTCATG TERM 5564 4452846 - 4452870 + g 73 -5 -4.61231 | gap 1 GTAGGAGACTCGCAC CTTGAGC-CCG GTTT CGGCGCTGAAG TTTTTAACAATATCA Shewmr7_3745 4453535 - 4453068 - | molybdopterin synthase subunit MoaE Shewmr7_3746 4453788 - 4453537 - | molybdopterin synthase subunit MoaD moaC 4454287 - 4453808 - | molybdenum cofactor biosynthesis protein C moaA 4455413 - 4454400 - | molybdenum cofactor biosynthesis protein A TERM 5565 4455638 - 4455618 - H 89 -12.7 -2.78018 | opp_overlap 4455618 4455616, overlap 4455615 ATTTGTCATTAATTA GGCTAAACA GCC TGTTTAGCC CCTGTGCCCTGCGGT Shewmr7_3749 4455754 - 4457403 + | electron-transferring-flavoprotein dehydrogenase TERM 5566 4457415 - 4457437 + F 100 -16.4 -4.90013 | opp_overlap 4457418 GTAACTCAACCGGAA TAAGGCGCTC ATT GAGCGCCTTA TTTTTGCTTGCCTTC TERM 5567 4457434 - 4457418 - f 100 -13.7 -3.6849 | opp_overlap 4457415 ACTCAACCGGAATAA GGCGCTC ATT GAGCGCC TTATTTTTGCTTGCC TERM 5568 4459013 - 4459036 + G 74 -11 -3.18239 | ATAGTGGCCAAGTGG TGGTAACCCG TGCT CGGGATACCA TTAATCAGCTCTCTC Shewmr7_3750 4457707 - 4459623 + | methyl-accepting chemotaxis sensory transducer TERM 5569 4459653 - 4459679 + T 100 -15.2 -5.4833 | opp_overlap 4459653 GAAACCAAACAACAA CGCCTTAGCGAG TCT CTCCCTAAGGCG TTTTTTATTGAATCG TERM 5570 4459679 - 4459653 - T 100 -15.2 -4.18294 | opp_overlap 4459653 GAAACCAAACAACAA CGCCTTAGCGAG TCT CTCCCTAAGGCG TTTTTTATTGAATCG Shewmr7_3751 4460063 - 4459707 - | hypothetical protein Shewmr7_3752 4460795 - 4460100 - | MOSC domain-containing protein Shewmr7_3753 4462369 - 4460912 - | diguanylate cyclase TERM 5571 4461895 - 4461908 + g 71 -5.3 -4.52345 | overlap 4461885 4461879 TGGTCCGATCCGCGG TATCG GCAT CGATA TTTATTTCGTAATGT TERM 5572 4462535 - 4462513 - R 100 -13.5 -5.47218 | TTCGAGCTAAAAAAA TGCCCCGTT GGGGA AACGGGGCA AACATGCGAACCAAC Shewmr7_3754 4463517 - 4462678 - | ribokinase-like domain-containing protein Shewmr7_3755 4463884 - 4464081 + | hypothetical protein Shewmr7_3756 4464479 - 4464090 - | hypothetical protein TERM 5573 4464720 - 4464707 - H 82 -3.1 -5.42259 | TTAGCTTGAAAAAAA CAGCT CAAT AACTG CCACATTTTGTTGAT Shewmr7_3757 4464826 - 4466925 + | hypothetical protein TERM 5574 4466984 - 4466959 - T 100 -10.5 -5.63517 | GCCCTAAAGAAAAAA TCCGCCAGA TAATCCCT TCTGGCGGA TGCATAACAAACGGC Shewmr7_3758 4469028 - 4467073 - | methyl-accepting chemotaxis sensory transducer TERM 5575 4467873 - 4467851 - G 78 -12.7 -2.98823 | TCGGCCTGACACATA GCCGCGGAA TTTTG CTCCGCGGC AGACTCTAGCTCGTG Shewmr7_3759 4469329 - 4469640 + | hypothetical protein TERM 5576 4469652 - 4469678 + F 100 -11.7 -4.02253 | GTAACACGCTTGTAG GGGATGCTTAA CTAAC TTAGGCATCCC TTTATGGATTGTTAG TERM 5577 4469705 - 4469739 + F 83 -8.7 -4.1043 | opp_overlap 4469710 TTAGTTGTGATTGAT GCAAATCAGACCACT AGACG ACTGGTCTAATTTGC TTTATGCTCTTTCCC Shewmr7_3760 4469756 - 4470352 + | TetR family transcriptional regulator Shewmr7_3761 4470497 - 4471654 + | iron-containing alcohol dehydrogenase TERM 5578 4471670 - 4471694 + F 100 -14.4 -4.07568 | opp_overlap 4471667 TCGTAGTACAAGTCG TCAACGCACC ATAAC GGTGCGTTGA TTTTCCCCCAAAAGA Shewmr7_3762 4471928 - 4472461 + | hypothetical protein TERM 5579 4473223 - 4473198 - g 72 -8.4 -3.92143 | opp_overlap 4473196 4473198 CAAAAGGTCTATAAA TTGGTGGAAA TGGCGC TTCCCACCAA TATTCAATTAAAGCG Shewmr7_3763 4472583 - 4473629 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 5580 4474811 - 4474799 - g 74 -7.7 -4.1822 | opp_overlap 4474799 CCTCAGGGCAAGAAA TCCTG CCC CAGGA TTTACCCCCAGAGCT Shewmr7_3764 4473667 - 4475082 + | nitrogen metabolism transcriptional regulator, NtrC, Fis family TERM 5581 4475095 - 4475130 + T 100 -16.6 -3.6869 | opp_overlap 4475095 4475098 4475105, overlap 4475098 4475105 TAATCATCCAGTTAA TAATAAAAAAGGGATA TTCA TATCCCTTTTTTATTA TTTAGACTTGGTATA TERM 5582 4475130 - 4475095 - T 100 -16.6 -3.0894 | opp_overlap 4475095 4475098 4475105, overlap 4475098 4475105 TAATCATCCAGTTAA TAATAAAAAAGGGATA TTCA TATCCCTTTTTTATTA TTTAGACTTGGTATA TERM 5583 4475098 - 4475127 + T 100 -13.9 -3.97019 | opp_overlap 4475095 4475098 4475105, overlap 4475095 4475105 TCATCCAGTTAATAA TAAAAAAGGGATA TTCA TATCCCTTTTTTA TTATTTAGACTTGGT TERM 5584 4475127 - 4475098 - T 100 -13.9 -3.68569 | opp_overlap 4475098 4475095 4475105, overlap 4475095 4475105 TCATCCAGTTAATAA TAAAAAAGGGATA TTCA TATCCCTTTTTTA TTATTTAGACTTGGT TERM 5585 4475105 - 4475120 + T 100 -7.6 -5.72254 | opp_overlap 4475098 4475095 4475105, overlap 4475098 4475095 GTTAATAATAAAAAA GGGATA TTCA TATCCC TTTTTTATTATTTAG TERM 5586 4475120 - 4475105 - T 100 -7.6 -5.64873 | opp_overlap 4475105 4475098 4475095, overlap 4475098 4475095 GTTAATAATAAAAAA GGGATA TTCA TATCCC TTTTTTATTATTTAG Shewmr7_3765 4475708 - 4475151 - | OmpA domain-containing protein TERM 5587 4475518 - 4475503 - G 85 -4 -5.40072 | GCCGTTGCAAAAAAA TTGGCT TCTA AACCAA ACCACTCGTTGAAGT Shewmr7_3766 4476312 - 4475896 - | hypothetical protein Shewmr7_3767 4477245 - 4476352 - | cation diffusion facilitator family transporter TERM 5588 4477217 - 4477173 - G 78 -13 -2.98545 | gap 1, overlap 4477170 GCTTGATAATAATGA GGGTCAAAGCGG-TAGCCACG GAAG CGCGACTAGCCAGTTTGACCC AAAAGTCGTATTGGG TERM 5589 4478684 - 4478664 - g 76 -8.3 -4.24413 | overlap 4478661 4478677 TTGATGAATAAAGAA GAGCTCAAT GAA ATTGTGCTC GGCAAAAAGCTCATG TERM 5590 4478757 - 4478747 - g 79 -6.8 -4.68424 | GAATCTACGCAAAAA GCTC CCC GAGC GCAGCGATGGCAGAC Shewmr7_3769 4478133 - 4478819 + | two component transcriptional regulator TERM 5591 4479637 - 4479626 - g 74 -3.6 -5.00616 | CTGGCCCGCAAAAAA GGCC AACA GACC ACCGAAACCGACCGT Shewmr7_3770 4478834 - 4480183 + | periplasmic sensor signal transduction histidine kinase TERM 5592 4480221 - 4480187 - T 100 -22.4 -4.67353 | opp_overlap 4480189 4480192, overlap 4480189 TTACCGACCTAAAAA CATAAGCCCCGCTAAC ACA GTTAGCGGGGCTTATA TCATCAACAGTTAAC TERM 5593 4480189 - 4480219 + T 100 -22.8 -2.79133 | opp_overlap 4480187 4480189, overlap 4480192 ACCGACCTAAAAACA TAAGCCCCGCTAAC ACA GTTAGCGGGGCTTA TATCATCAACAGTTA TERM 5594 4480219 - 4480189 - T 100 -22.8 -3.95214 | opp_overlap 4480189 4480192, overlap 4480187 ACCGACCTAAAAACA TAAGCCCCGCTAAC ACA GTTAGCGGGGCTTA TATCATCAACAGTTA TERM 5595 4480192 - 4480216 + T 100 -20.1 -3.54475 | opp_overlap 4480189 4480187, overlap 4480189 GACCTAAAAACATAA GCCCCGCTAAC ACA GTTAGCGGGGC TTATATCATCAACAG Shewmr7_3771 4482101 - 4480242 - | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 5596 4482131 - 4482151 + H 73 -9.7 -3.05596 | AGCGCTGTTCCATTT CGGCACACT CAC GGTGTGTCG TTGGATGACAAAATG TERM 5597 4482707 - 4482693 - g 71 -5.6 -4.56775 | overlap 4482694 ATGCTTGGGGAAAAA CCTCGG TCA CCGAGC GTGCGAATTTACTGC TERM 5598 4483812 - 4483789 - g 76 -11 -3.2614 | gap 1, opp_overlap 4483789 GACTCGGGACATGAA CCGCG-CCCAG CGC CTAGGTCGCGG TATTCAAGCGGGTCG TERM 5599 4483957 - 4483939 - g 71 -6 -4.33105 | opp_overlap 4483941 CAATCACTATCAAAA CACCAAAA ACC TATTGGTG AGTTACGATATCAAT Shewmr7_3772 4482470 - 4483990 + | aldehyde dehydrogenase TERM 5600 4484013 - 4484043 + T 100 -8.5 -4.87786 | gap 2, opp_overlap 4484019 4484023, overlap 4484018 4484019 GAAACTTTACCTTGA TAACAAGAAAGGGCC ACT GGCCCTTTC--GTTA TTTTTATCGCGTTGA TERM 5601 4484018 - 4484040 + T 100 -12 -4.53475 | opp_overlap 4484019 4484023, overlap 4484013 4484019 TTTACCTTGATAACA AGAAAGGGCC ACT GGCCCTTTCG TTATTTTTATCGCGT TERM 5602 4484019 - 4484039 + T 100 -15.5 -3.31001 | opp_overlap 4484019 4484023, overlap 4484018 4484013 TTACCTTGATAACAA GAAAGGGCC ACT GGCCCTTTC GTTATTTTTATCGCG TERM 5603 4484039 - 4484019 - T 100 -15.5 -3.79906 | opp_overlap 4484019 4484018 4484013, overlap 4484023 TTACCTTGATAACAA GAAAGGGCC ACT GGCCCTTTC GTTATTTTTATCGCG TERM 5604 4484035 - 4484023 - T 100 -10.5 -4.51812 | opp_overlap 4484019 4484018 4484013, overlap 4484019 CTTGATAACAAGAAA GGGCC ACT GGCCC TTTCGTTATTTTTAT Shewmr7_3773 4484821 - 4484060 - | short-chain dehydrogenase/reductase SDR TERM 5605 4484744 - 4484765 + g 73 -5.1 -4.65895 | AATATCAACACCTTG TGCGGCT AAGGTCAG GGCCGCA TTTTTACCTAAGCCA Shewmr7_3774 4484959 - 4485876 + | LysR family transcriptional regulator Shewmr7_3775 4486361 - 4485873 - | hypothetical protein Shewmr7_3776 4486812 - 4486390 - | hypothetical protein TERM 5606 4487081 - 4487093 + G 74 -2.6 -5.15969 | CCGTATCTTTCACTG GTCC TTGGT GGGC TTTTTTACCTTAGCC TERM 5607 4487589 - 4487579 - g 70 -4.6 -4.70659 | overlap 4487580 GCTGACAGGTAAAAA GCAG CGC CCGC TGATCCAACAAGATG Shewmr7_3777 4487019 - 4487615 + | cytochrome B561 Shewmr7_3778 4487649 - 4488083 + | cytochrome c-type protein Shp Shewmr7_3779 4488131 - 4488694 + | diheme cytochrome c Shewmr7_3780 4488687 - 4488953 + | peptidase TERM 5608 4489114 - 4489129 + G 77 -11.8 -3.14468 | CCTCGATTTAGGCTT GCCCGG AAAG CCGGGC TTAAGTGTACTGAGC Shewmr7_3781 4488953 - 4489615 + | two component transcriptional regulator Shewmr7_3782 4489618 - 4490934 + | periplasmic sensor signal transduction histidine kinase TERM 5609 4490965 - 4490936 - T 100 -16.5 -3.73775 | CTCAGCCGCATTAAA CGCACAGCAAAGC AAAT GCTCCGCTGTGCG ATGGGCATTACGACT Shewmr7_3783 4491485 - 4490973 - | hypothetical protein TERM 5610 4491685 - 4491650 - R 100 -15.6 -3.15242 | opp_overlap 4491657, overlap 4491657 TGAAACAAATCAAAC GAAAAAAGCCTCTGCA TTGC TGCAGAGGCTTATCTC TTAATGTTGGCGGAG TERM 5611 4491678 - 4491657 - R 100 -14.5 -5.41359 | opp_overlap 4491657, overlap 4491650 AATCAAACGAAAAAA GCCTCTGCA TTGC TGCAGAGGC TTATCTCTTAATGTT TERM 5612 4491657 - 4491678 + r 100 -14.5 -3.72396 | opp_overlap 4491657 4491650 AATCAAACGAAAAAA GCCTCTGCA TTGC TGCAGAGGC TTATCTCTTAATGTT TERM 5613 4492085 - 4492097 + r 72 -6.3 -4.2586 | AGCTGTATTGAGTGC CACTT CTT AAGTG TTTGTATTCGTCTAA TERM 5614 4493299 - 4493271 - R 72 -8.1 -3.85698 | TGTGTTTTTGATAAA CAGTTGCAGCCAC CTG GTATCTGCGACTG CCGTCAGCTTAGGGA TERM 5615 4493753 - 4493769 + r 85 -9.4 -4.08546 | overlap 4493735 TTGGTCTTTCGGCGA GGGGGT TTTTC ACCCCC TTTATCGTTACTCAT TERM 5616 4494551 - 4494563 + r 83 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5617 4495126 - 4495166 + r 84 -2.7 -5.63374 | opp_overlap 4495133 4495138 4495140 4495142, overlap 4495140 GGACTCGCCTTAGAC TTGAATATTCAAGACACTT AAA AAGTGTTTTAAGAACTCAA TTTTTTTCGTATTAA TERM 5618 4496993 - 4497015 + r 70 -7.1 -3.76952 | gap 1 TGATTTAAATTTTGA TTACTC-GCC AAAC GGCAGAGTAA TTTCGATTAACTCAA TERM 5619 4497120 - 4497134 + r 75 -8.6 -3.80893 | TCAGCGGGTCAGGGC TGCGTA TTC TACGCA TTTCCCTTGTCGCGT TERM 5620 4497568 - 4497522 - R 78 -9.7 -3.46051 | gap 1, opp_overlap 4497562, overlap 4497523 4497558 4497561 4497562 GAACAAATAGAGGAA GTCGCGACCTTATACTTATATA GCTA CATAAAAGTATAAGGTCGTG-C AACACGGCTTACTTG TERM 5621 4497568 - 4497523 - R 71 -9.9 -2.66546 | opp_overlap 4497562, overlap 4497522 4497558 4497561 4497562 AACAAATAGAGGAAG TCGCGACCTTATACTTATATA GCTA CATAAAAGTATAAGGTCGTGC AACACGGCTTACTTG Shewmr7_3784 4498494 - 4497589 - | DNA binding domain-containing protein TERM 5622 4498131 - 4498096 - G 71 -10.4 -3.14683 | ATACCCTTTGAGTAA GGCTGGATGGCGGATA TTTC TATCCTCCATGCTGCC CCAGTGCAGAGTACA Shewmr7_3785 4499447 - 4498551 - | formate dehydrogenase, subunit FdhD TERM 5623 4499032 - 4499056 + g 83 -5.6 -5.07053 | CTGCCATATACAGTT CCTTGACCAC AGCCC GAGGTCACGG TTTTTTCCGATAATT Shewmr7_3786 4499744 - 4500208 + | hypothetical protein TERM 5624 4500425 - 4500395 - g 91 -10.4 -4.57837 | overlap 4500396 ATACTCTCCCAAAAA CCGATGAGGATCCG AAC CGCATCCTCACCGC GGAGGAACTGCCCAA TERM 5625 4500424 - 4500396 - g 84 -13.9 -3.3422 | overlap 4500395 TACTCTCCCAAAAAC CGATGAGGATCCG AAC CGCATCCTCACCG CGGAGGAACTGCCCA TERM 5626 4500848 - 4500822 - g 79 -9.4 -4.14739 | TGACCTACCCCAAAA TGCACCAGAGCC CTT AGCTCAGATGCA AAAGCCAGTTGTTTA Shewmr7_3787 4500208 - 4500864 + | hypothetical protein Shewmr7_3788 4501051 - 4502712 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shewmr7_3789 4502723 - 4503400 + | cytoplasmic chaperone TorD family protein TERM 5627 4503508 - 4503493 - f 100 -9 -4.82901 | CCTTTGCCACAAAAA GGAAGC CAAG GCTTCC ACAGTAACCGAGGTG Shewmr7_3790 4503567 - 4503764 + | twin-arginine translocation pathway signal TERM 5628 4505209 - 4505176 - g 75 -8.9 -3.82442 | gap 1, opp_overlap 4505179, overlap 4505172 4505179 CGAAGATAAAACCAA GATCGCGCAGAAGGAT AAC ATCCGTCTG-GCGTTC TTCTGGGGTCAATCT TERM 5629 4505179 - 4505206 + G 73 -9.2 -3.80733 | gap 1, opp_overlap 4505176 4505172 4505179 AGATAAAACCAAGAT CGCGCAGAAGGAT AAC ATCCGTCTG-GCG TTCTTCTGGGGTCAA Shewmr7_3791 4503782 - 4506634 + | formate dehydrogenase alpha subunit TERM 5630 4507093 - 4507078 - g 76 -7.6 -4.35483 | opp_overlap 4507078, overlap 4507074 GCCGAGCACAAGAAA TACGGT GCCA ACCGTA TTGCTGAAGGCAAGC Shewmr7_3792 4506661 - 4507257 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5631 4507289 - 4507268 - f 95 -13.1 -3.16534 | ACTAAGCAGAGTGAA GGTTAGGGA GTCA TCCCTAACC TCTGGCAAGGAGTGA Shewmr7_3793 4507307 - 4508335 + | formate dehydrogenase gamma subunit TERM 5632 4508384 - 4508366 - f 100 -10.2 -4.87786 | opp_overlap 4508366, overlap 4508341 TTAATCTGATAAAAA CACCTCGC ACT GCGGGGTG TTTTTTTACCCTTAA TERM 5633 4508366 - 4508384 + F 100 -12.4 -5.47399 | opp_overlap 4508341 4508366 TTAATCTGATAAAAA CACCTCGC ACT GCGGGGTG TTTTTTTACCCTTAA Shewmr7_3794 4508714 - 4508914 + | twin-arginine translocation pathway signal TERM 5634 4509697 - 4509675 - g 80 -4.2 -5.19879 | gap 1 CGCCAAAGAGAAAAA CAACG-CGA AAATCA TCGTCGTTG ACCCACGTTTCTCTC TERM 5635 4509898 - 4509877 - g 78 -3.7 -5.2166 | GAAGAAGCGAAAAAA TTCCCACCT AAAG AAGTGGCAA ATATCACTGGCGTAA TERM 5636 4510653 - 4510639 - g 79 -7.1 -4.62069 | CGTTTAGCGCAAAAA CTCGG TATCG CCGAG CAATACACTAAACGC TERM 5637 4511127 - 4511107 - g 76 -3.1 -5.06816 | ACTGCGGAAGAAAAA GCCGAAGCC GAA GGCCGCAAC TGGAAGACCGACTTA Shewmr7_3795 4508932 - 4511784 + | formate dehydrogenase alpha subunit TERM 5638 4511907 - 4511888 - g 76 -6.4 -4.66609 | CACCGCATGTAAAAA CGAAAACG ATTC CGCTCTCG AGTGGGGTATCCAAC TERM 5639 4512012 - 4512032 + G 79 -11.9 -3.28712 | opp_overlap 4512029, overlap 4512001 4512000 GACGCGCCATGTATG GCGGTTTGC CCT GCAAACTGC TTCTACAGAACCGAA Shewmr7_3796 4511814 - 4512383 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5640 4513108 - 4513118 + G 71 -6.8 -4.25104 | opp_overlap 4513104 4513107 TTCAAAGGTAAGCAC CCTG ATG CAGG TTTTGCTAACGCCGG Shewmr7_3797 4512460 - 4513443 + | formate dehydrogenase gamma subunit TERM 5641 4513485 - 4513464 - T 100 -14.5 -5.79595 | opp_overlap 4513464 GCTGAAAACAAAAAA CCTCCACAG CATG CTGTGGAGG TTTTTTATGGGTAAA TERM 5642 4513464 - 4513485 + T 100 -14.5 -5.28176 | opp_overlap 4513464 GCTGAAAACAAAAAA CCTCCACAG CATG CTGTGGAGG TTTTTTATGGGTAAA Shewmr7_3798 4515580 - 4513523 - | TonB-dependent receptor TERM 5643 4517125 - 4517111 - g 70 -4.2 -4.6902 | opp_overlap 4517123, overlap 4517113 4517123 TGATAAGTCGAAAAA GGCTGT CGA ACAGGC GGCAAATACTGTCGT Shewmr7_3799 4516140 - 4517723 + | methyl-accepting chemotaxis sensory transducer TERM 5644 4517746 - 4517777 + T 89 -6.6 -5.40474 | opp_overlap 4517748, overlap 4517747 4517748 CAGCTAAGTTGTTAC AATGGCCTAATATC GCAA GATGTTAGGCCAAA TTTTTTTAGAGCAAT TERM 5645 4517747 - 4517776 + T 84 -10.1 -3.83561 | opp_overlap 4517748, overlap 4517746 4517748 AGCTAAGTTGTTACA ATGGCCTAATATC GCAA GATGTTAGGCCAA ATTTTTTTAGAGCAA TERM 5646 4517775 - 4517748 - T 86 -11.4 -3.31322 | opp_overlap 4517747 4517746 4517748 GCTAAGTTGTTACAA TGGCCTAATATC GCAA GATGTTAGGCCA AATTTTTTTAGAGCA TERM 5647 4517748 - 4517775 + T 93 -13.6 -2.89655 | opp_overlap 4517748, overlap 4517747 4517746 GCTAAGTTGTTACAA TGGCCTAATATC GCAA GATGTTAGGCCA AATTTTTTTAGAGCA Shewmr7_3800 4519156 - 4518227 - | bile acid:sodium symporter TERM 5648 4518523 - 4518505 - G 74 -7.4 -4.26344 | ACACCGCGAGCAAAA TCACAGGC CCC ACCTGCGA AAATTGCCCTGCATT TERM 5649 4519045 - 4519065 + g 74 -7.5 -4.1899 | ATAACATAATCACCA CCAGCAAGG GCA CTATGCTGG TTTTCAATCCGCTAA TERM 5650 4519849 - 4519869 + G 77 -9.7 -3.75535 | AAAGAGATGGAGATG GTCAAAGCC TTA GGCTATGAC TTTGAATCTATGTAC Shewmr7_3801 4519543 - 4520880 + | coproporphyrinogen III oxidase TERM 5651 4520920 - 4520896 - f 80 -11.5 -2.71483 | opp_overlap 4520901, overlap 4520901 ATATCGGTTGAACCA CAAAAGGCCCA TGA TGGGCCTTTTT GTTAGCGCCATTTCA TERM 5652 4520901 - 4520915 + F 100 -11.4 -5.06414 | opp_overlap 4520896 4520901 GGTTGAACCACAAAA GGCCCA TGA TGGGCC TTTTTGTTAGCGCCA TERM 5653 4520915 - 4520901 - f 100 -11.4 -4.5442 | opp_overlap 4520901, overlap 4520896 GGTTGAACCACAAAA GGCCCA TGA TGGGCC TTTTTGTTAGCGCCA Shewmr7_3802 4520996 - 4521229 + | hypothetical protein Shewmr7_3804 4522369 - 4523241 + | patatin Shewmr7_3805 4524169 - 4523234 - | LysR family transcriptional regulator TERM 5654 4524100 - 4524085 - G 73 -11.8 -2.66451 | overlap 4524082 4524081 ACTGACTTAAATGCA GCCGCG CCGC CGCGGC CGTGACACTCTGCTC Shewmr7_3806 4525024 - 4524170 - | hypothetical protein TERM 5655 4525425 - 4525406 - g 78 -6.4 -4.83615 | overlap 4525408 GACTCGCCATAAAAA CTTCGATG CCTT CCTCGAAG CCATGACAGGCAAAC Shewmr7_3807 4525221 - 4525685 + | RNA methyltransferase TERM 5656 4526085 - 4526102 + F 73 -7.1 -4.18018 | TCATGCGGTTGTTGA TGGTTTA TATT TAAACCA TTTTAACTCGGACAA TERM 5657 4526307 - 4526318 + F 82 -3 -5.50313 | opp_overlap 4526307 TAGATAAGGCATTAA TACT TTTG AGTA TTTTTTGCTTTTCTC TERM 5658 4527029 - 4527039 + G 79 -5.4 -4.9725 | overlap 4527022 GCTGTAGCCGCGTAG TGCA ACG TGCA TTTTTATGTAGCGAT Shewmr7_3809 4526977 - 4527315 + | hypothetical protein Shewmr7_3810 4528192 - 4527617 - | TetR family transcriptional regulator Shewmr7_3811 4528284 - 4528700 + | hypothetical protein Shewmr7_3812 4529393 - 4528839 - | hypothetical protein Shewmr7_3813 4529620 - 4531665 + | peptidase S9 prolyl oligopeptidase TERM 5659 4531711 - 4531683 - T 100 -13.3 -5.1523 | opp_overlap 4531688, overlap 4531688 CCTAGAACAGAAAAA CAAAAGGTCTGCA CTA TGCAGACCTTTTT ATTGGACGAAATACA TERM 5660 4531688 - 4531706 + T 100 -13.2 -5.06414 | opp_overlap 4531683 4531688 AACAGAAAAACAAAA GGTCTGCA CTA TGCAGACC TTTTTATTGGACGAA TERM 5661 4531706 - 4531688 - T 100 -13.2 -5.40873 | opp_overlap 4531688, overlap 4531683 AACAGAAAAACAAAA GGTCTGCA CTA TGCAGACC TTTTTATTGGACGAA Shewmr7_3814 4533203 - 4531740 - | peptidase M16 domain-containing protein Shewmr7_3815 4534531 - 4533200 - | peptidase M16 domain-containing protein TERM 5662 4534614 - 4534586 - R 82 -10.4 -3.73968 | gap 1, opp_overlap 4534586 4534589, overlap 4534590 AAATTGCCTAGCAAA TCAAGCGTGGGAA GGCC TTCCCACGCC-GA TTTTTTGTAAGCTCA TERM 5663 4534586 - 4534614 + r 100 -8.2 -5.26316 | gap 1, opp_overlap 4534586 4534590, overlap 4534589 AAATTGCCTAGCAAA TCAAGCGTGGGAA GGCC TTCCCACGCC-GA TTTTTTGTAAGCTCA TERM 5664 4534589 - 4534612 + r 77 -11 -2.84317 | opp_overlap 4534586 4534590, overlap 4534586 TTGCCTAGCAAATCA AGCGTGGGAA GGCC TTCCCACGCC GATTTTTTGTAAGCT TERM 5665 4534611 - 4534590 - R 100 -14.5 -3.56704 | opp_overlap 4534589 4534586, overlap 4534586 TGCCTAGCAAATCAA GCGTGGGAA GGCC TTCCCACGC CGATTTTTTGTAAGC Shewmr7_3816 4536066 - 4534669 - | carboxypeptidase Shewmr7_3817 4536387 - 4537382 + | hypothetical protein TERM 5666 4537696 - 4537674 - g 78 -9.9 -3.91197 | gap 1 CCACAAACGACGAAA GGCTTAGGCG CAGG CGCC-AAGCC AGATGTCGGCTGCGC Shewmr7_3818 4537464 - 4538600 + | cell division protein FtsZ TERM 5667 4538601 - 4538620 + T 72 -9.4 -3.20723 | opp_overlap 4538601 4538605, overlap 4538605 CCCCAAGCGCATTAA TTAACCTG AGTT CAGGTTAA TTAGCTTGATGCAAA TERM 5668 4538620 - 4538601 - T 72 -9.4 -3.18681 | opp_overlap 4538601 4538605, overlap 4538605 CCCCAAGCGCATTAA TTAACCTG AGTT CAGGTTAA TTAGCTTGATGCAAA Shewmr7_3819 4539255 - 4538617 - | methyltransferase type 11 TERM 5669 4539328 - 4539318 - R 71 -4 -4.83715 | AATGTAAAAAAATAA CTAA GGT TTAG GGATTTTACGCTCTT Shewmr7_3820 4539671 - 4539318 - | hypothetical protein TERM 5670 4539498 - 4539510 + g 71 -6.9 -4.13014 | CGAGGTTTCTTGGGC GGCTC GGC GGGCC TTTTCAAGCTGTGCC TERM 5671 4539803 - 4539776 - H 74 -9.4 -3.37975 | gap 1, opp_overlap 4539774 4539771 4539802, overlap 4539794 4539802 AGTGATGAGTTAGAA TGATTTTC-GTGT AAG ACACTGAAAATCA GCTATCTTAGACTGT TERM 5672 4540068 - 4540082 + G 87 -10 -4.33854 | CACCTGACACCCCTC GCCTTG ATC CAAGGC TTTAGTTTTATTAGT TERM 5673 4540281 - 4540261 - g 70 -11.2 -2.53382 | ACCATGTCGAATTTA GTTGGCTC CACCT GAGCCAAC AGGGTAAAGAACTCC TERM 5674 4540784 - 4540770 - g 76 -2.8 -5.19212 | overlap 4540772 ATCAGCACCAAAAAA CTGC TCGAAAC GCAG CTCACCACCCGTGCT Shewmr7_3821 4539966 - 4542086 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Shewmr7_3822 4542921 - 4542355 - | DTW domain-containing protein TERM 5675 4543050 - 4543018 - R 100 -10.1 -5.28778 | gap 1 ATTACCCATAAAAAA TGCCCGTAG-TTAT GGTCAA ATAAGCTACGGGCA AAGGGTGTTTTGGGT Shewmr7_3823 4544291 - 4543083 - | Bcr/CflA subfamily drug resistance transporter Shewmr7_3824 4544407 - 4545366 + | LysR family transcriptional regulator TERM 5676 4545410 - 4545385 - T 100 -11.1 -5.35222 | AAAAGCCATAAAAAA GCCCAGGGCAC AAGC GTATCCTGGGC CGATTCAACTCAACA Shewmr7_3825 4547300 - 4545429 - | methyl-accepting chemotaxis sensory transducer Shewmr7_3826 4547730 - 4548065 + | hypothetical protein Shewmr7_3827 4549805 - 4548348 - | Sel1 domain-containing protein Shewmr7_3828 4550549 - 4549842 - | hypothetical protein TERM 5677 4551027 - 4551001 - g 73 -11.6 -3.00585 | overlap 4550998 GATTACACCAAATTA GCCGCCAGCATT CCT AATGCCGACAGC CTATTAGCCGCAGCG Shewmr7_3829 4550740 - 4551267 + | hypothetical protein TERM 5678 4551275 - 4551305 + F 100 -12.7 -3.54543 | overlap 4551276 TGCTGTAATCTTCGC TTTCACCCTAAGC ACACG GCTTAGGGTGAAC TTTAGCGCCGTAAAT TERM 5679 4551276 - 4551304 + F 100 -16.2 -2.72511 | overlap 4551275 GCTGTAATCTTCGCT TTCACCCTAAGC ACACG GCTTAGGGTGAA CTTTAGCGCCGTAAA Shewmr7_3830 4551364 - 4551825 + | hypothetical protein TERM 5680 4551869 - 4551842 - T 100 -11.4 -5.28778 | opp_overlap 4551842 AGCACCCATAAAAAA GCATGAATCGCA GTGC TGCCATTCATGC TTTGAGTTTAACGTT TERM 5681 4551842 - 4551869 + T 95 -11.4 -3.85567 | opp_overlap 4551842 AGCACCCATAAAAAA GCATGAATCGCA GTGC TGCCATTCATGC TTTGAGTTTAACGTT Shewmr7_3831 4552738 - 4551914 - | putative signal transduction protein TERM 5682 4552432 - 4552399 - G 79 -8.9 -4.15044 | TCTCTTGGCAATAAA GCGCAATTTCAAAGG TTTG CCCCCAAAACTGCGC TAAATCGACTCCTTG Shewmr7_3832 4553034 - 4553645 + | TonB family protein TERM 5683 4553656 - 4553683 + T 83 -11.4 -3.00298 | gap 1, opp_overlap 4553656 TTTAAGACCAAGGAA CCAGAACGCACGA CAG TTG-GCGTTCTGG TCTGTCATTCAGCGA TERM 5684 4553683 - 4553656 - T 76 -9.2 -3.45768 | gap 1, opp_overlap 4553656 TTTAAGACCAAGGAA CCAGAACGCACGA CAG TTG-GCGTTCTGG TCTGTCATTCAGCGA Shewmr7_3833 4554986 - 4553718 - | inner membrane protein YjeH TERM 5685 4554050 - 4554066 + g 76 -2.9 -5.14563 | overlap 4554052 CCGCCAAGGCGCGGA TTGGCAC ACC GTGACGA TTTTTTACTGCAAAG TERM 5686 4554779 - 4554769 - G 79 -8.2 -4.30995 | TTTTCGACAAAATAA GCGG GAC CCGC AGCATGGGGAAAGAC TERM 5687 4554933 - 4554909 - G 79 -8.5 -4.30719 | TTGCGGGAGAATAAA CACCCCTGTGC CCA GCAAAGTGGTG GCCATCAAGCCTGCG Shewmr7_3834 4555214 - 4555645 + | AsnC family transcriptional regulator TERM 5688 4555697 - 4555671 - T 100 -10.9 -4.56978 | opp_overlap 4555693, overlap 4555692 4555693 CCCCCAAACAAGAAA CGCCACCCCTA AGGAA TAAAGGTGGCG AGGCCCTTGTGGAGG Shewmr7_3835 4556851 - 4555910 - | polysulphide reductase, NrfD Shewmr7_3836 4557534 - 4556848 - | twin-arginine translocation pathway signal Shewmr7_3837 4558003 - 4557539 - | formate-dependent nitrite reductase TERM 5689 4557772 - 4557784 + g 76 -2.7 -5.06451 | TTAATCCAAAAACCA CTAAA TCA TTTGG TTTTTTAGGGTGATC TERM 5690 4558072 - 4558044 - R 100 -14 -3.40082 | gap 1, overlap 4558048 GGAAATACAGAGGAA GTCAGGGTTCGGA AGGC TCCGAACCC-GAC AGTCGTGGTCAGACG TERM 5691 4558069 - 4558048 - R 100 -14.5 -2.59954 | overlap 4558044 ATACAGAGGAAGTCA GGGTTCGGA AGGC TCCGAACCC GACAGTCGTGGTCAG Shewmr7_3838 4558554 - 4558081 - | hypothetical protein TERM 5692 4559166 - 4559180 + G 74 -7.2 -4.13591 | opp_overlap 4559166 CGGTTTATTTCCAAA TGAGTT TGT AACTCA TTTATATCCTATTGC Shewmr7_3839 4558969 - 4559937 + | LysR family transcriptional regulator Shewmr7_3840 4560112 - 4561833 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 5693 4562447 - 4562461 + G 83 -2.8 -5.40072 | TGTACCTGCAAGCCT TGGC TGTGAAT GCCA TTTTTTTGCGGGCAG Shewmr7_3841 4561833 - 4562636 + | alpha/beta hydrolase fold TERM 5694 4563216 - 4563240 + G 80 -10.7 -3.75153 | opp_overlap 4563205 GAGACCCGATCTCAA GCTGCGCTTAG ATG CTAATCGCGGC TTTAGCTTAGAACAG Shewmr7_3842 4562659 - 4563708 + | O-succinylbenzoate synthase Shewmr7_3843 4563715 - 4565190 + | O-succinylbenzoate-CoA ligase TERM 5695 4565233 - 4565263 + T 81 -10.7 -3.28712 | gap 1, opp_overlap 4565241, overlap 4565241 TGGTAAATTCAGGCA CA-AAAAAACCTGC CGTA GCAGGTTTTTTATG TTCTCACGCCGAGCC TERM 5696 4565241 - 4565254 + T 100 -8.1 -5.5208 | opp_overlap 4565241, overlap 4565233 TCAGGCACAAAAAAA CCTGC CGTA GCAGG TTTTTTATGTTCTCA TERM 5697 4565254 - 4565241 - T 100 -8.1 -5.64274 | opp_overlap 4565241 4565233 TCAGGCACAAAAAAA CCTGC CGTA GCAGG TTTTTTATGTTCTCA Shewmr7_3844 4566139 - 4565282 - | RNA polymerase factor sigma-32 Shewmr7_3845 4567335 - 4566370 - | cell division protein FtsX TERM 5698 4566521 - 4566509 - G 75 -9.1 -3.86346 | overlap 4566518 TGACTGCCGTACAAA CCGAG CAA CTCGG CTAGGGCAGAATCCA TERM 5699 4566911 - 4566925 + g 76 -5.6 -4.84359 | opp_overlap 4566912, overlap 4566912 GGCGTCACGGTAATC ACCGCT GGC AGCGGG TTTTTATCGAGATAG TERM 5700 4566912 - 4566924 + g 70 -9.1 -3.50133 | opp_overlap 4566912, overlap 4566911 GCGTCACGGTAATCA CCGCT GGC AGCGG GTTTTTATCGAGATA TERM 5701 4567297 - 4567276 - G 80 -2.2 -5.52023 | overlap 4567286 ATGACGAATAAAAAA CATCACGA TACGCC CCGAGATG GGCAACTTGCTGCGC Shewmr7_3846 4568033 - 4567332 - | cell division ATP-binding protein FtsE Shewmr7_3847 4569791 - 4568037 - | signal recognition particle-docking protein FtsY TERM 5702 4569307 - 4569320 + g 78 -9.5 -3.96068 | TCCGCCGCTAACCGC GCGGC TTCG GCCGC TTGTTGTTCGGCTAA Shewmr7_3848 4570005 - 4570652 + | putative methyltransferase TERM 5703 4570852 - 4570830 - g 76 -6.2 -4.66609 | TATGCTATTTAAAAA CCTGCTGACG CTA CGCAAGCAAG ATTATCTGCAAGTGT Shewmr7_3849 4570654 - 4570929 + | hypothetical protein TERM 5704 4570942 - 4570967 + T 75 -10.5 -2.74144 | opp_overlap 4570947, overlap 4570947 TAATGCTCGGAAAGC AAAAAGCCCTC TTAC GAGGGCTTTTA ATTTGGACATCAGGC TERM 5705 4570962 - 4570947 - T 100 -10.4 -4.98531 | opp_overlap 4570942 4570947 CTCGGAAAGCAAAAA GCCCTC TTAC GAGGGC TTTTAATTTGGACAT TERM 5706 4570947 - 4570962 + T 100 -10.4 -4.55128 | opp_overlap 4570947, overlap 4570942 CTCGGAAAGCAAAAA GCCCTC TTAC GAGGGC TTTTAATTTGGACAT Shewmr7_3850 4571563 - 4571000 - | NapC/NirT cytochrome c domain-containing protein TERM 5707 4571028 - 4571049 + g 70 -8.7 -3.57808 | overlap 4571017 4571026 TAGGGGTGAGCGACA CCTTTGTGG CAAT CCACACAGG TCTTTCTCGCTTCAG Shewmr7_3851 4572007 - 4572369 + | hypothetical protein Shewmr7_3852 4572473 - 4572928 + | hypothetical protein Shewmr7_3853 4572982 - 4573461 + | hypothetical protein Shewmr7_3854 4573638 - 4573940 + | copper-transporting ATPase domain-containing protein Shewmr7_3855 4573962 - 4575470 + | RND family efflux transporter MFP subunit TERM 5708 4576136 - 4576116 - g 75 -8.9 -3.93583 | CAAGCGATCGATAAA GCCAACAGC GAG GCCGGTGGC TCAGTGGTCGAAATG TERM 5709 4576937 - 4576950 + G 70 -4.5 -4.68545 | gap 1, overlap 4576937 4576938 CAAAACCTTTGCCAT G-GCGG CGG CCGCGC TTTTATCTATTACCT TERM 5710 4577626 - 4577613 - g 72 -8.1 -3.83026 | GTGCCGCACACTAAA TCGGC CTAC GCCGA ACGCAGTGGTGGCGG Shewmr7_3856 4575480 - 4578617 + | CzcA family heavy metal efflux protein TERM 5711 4578634 - 4578676 + F 100 -12.9 -3.97636 | opp_overlap 4578635 4578642, overlap 4578636 4578642 CCAAAGCGTTAACTC AGCATAAACCCCTAGTGTG ATTTA CATGCTAGGGGTTTATGTA TTTCTGAATTCGAAT TERM 5712 4578675 - 4578635 - f 70 -9.8 -2.54387 | opp_overlap 4578634 4578636 4578642, overlap 4578642 CAAAGCGTTAACTCA GCATAAACCCCTAGTGTG ATTTA CATGCTAGGGGTTTATGT ATTTCTGAATTCGAA TERM 5713 4578636 - 4578674 + F 100 -17.7 -3.57808 | opp_overlap 4578635 4578642, overlap 4578634 4578642 AAAGCGTTAACTCAG CATAAACCCCTAGTGTG ATTTA CATGCTAGGGGTTTATG TATTTCTGAATTCGA TERM 5714 4578642 - 4578668 + F 100 -10.9 -4.31166 | opp_overlap 4578635 4578642, overlap 4578636 4578634 TTAACTCAGCATAAA CCCCTAGTGTG ATTTA CATGCTAGGGG TTTATGTATTTCTGA TERM 5715 4578995 - 4578979 - g 86 -6.6 -4.94811 | CTAAAAATAAACAAA CCAATC CCGAT GATTGG CAGAGCAATATTGGC Shewmr7_3857 4578801 - 4579958 + | ribonuclease T2 TERM 5716 4580427 - 4580410 - g 71 -6.9 -4.15854 | opp_overlap 4580424, overlap 4580411 AAATCTATGTCAAAA CCGGCTC CAGC GAGACGG CAGCCGAATTTAGCG Shewmr7_3858 4580184 - 4582145 + | methyl-accepting chemotaxis sensory transducer TERM 5717 4582232 - 4582193 - T 83 -9.4 -4.0031 | opp_overlap 4582200, overlap 4582200 ATCTGCACCAAACAA CCTAAAACCTAGGTACGC GAAA GCCTATCTAGGTTTTATG AGTCTGATTATGCTG TERM 5718 4582225 - 4582200 - T 72 -6.1 -4.39407 | opp_overlap 4582200, overlap 4582193 CCAAACAACCTAAAA CCTAGGTACGC GAAA GCCTATCTAGG TTTTATGAGTCTGAT TERM 5719 4582200 - 4582225 + T 87 -8.3 -4.45485 | opp_overlap 4582200 4582193 CCAAACAACCTAAAA CCTAGGTACGC GAAA GCCTATCTAGG TTTTATGAGTCTGAT Shewmr7_3859 4583041 - 4582265 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 5720 4583153 - 4583137 - R 100 -12.3 -5.4659 | opp_overlap 4583137 GAATATAAAGAAAAA GCCCTCA AAT TGAGGGC TTGATTCGCGAGCGA TERM 5721 4583137 - 4583153 + r 95 -12.3 -3.33696 | opp_overlap 4583137 GAATATAAAGAAAAA GCCCTCA AAT TGAGGGC TTGATTCGCGAGCGA Shewmr7_3860 4584430 - 4583174 - | aromatic amino acid transporter TERM 5722 4583273 - 4583261 - G 77 -10.5 -3.55453 | overlap 4583257 CACCAAGATAATCAA CGGCG TAC CGCCG AAGACTCTAAAACCT Shewmr7_3861 4586853 - 4584430 - | glycerol-3-phosphate acyltransferase TERM 5723 4585500 - 4585512 + g 83 -3.4 -5.45652 | CAAAGACTTGCCACA CAGA CTCTT TCTG TTTTTTCTTACCACT TERM 5724 4585816 - 4585799 - G 79 -6.9 -4.67607 | CGGCGAATAAAGAAA GCCCCGC CACG GCGGAAC AACGGCCCCGCAGGC TERM 5725 4586555 - 4586543 - G 71 -6.3 -4.39828 | AACAGGCGCATAAAA CATTC GAG GAATG GCTCATTACTGGCAC TERM 5726 4586793 - 4586803 + g 71 -6.8 -4.18197 | opp_overlap 4586787 GCACAACAATAGTGT GCAC TAA GTGC TTTTGGATCCAGCGT Shewmr7_3862 4587015 - 4587635 + | LexA repressor Shewmr7_3863 4587632 - 4588144 + | hypothetical protein TERM 5727 4588178 - 4588199 + F 100 -6.5 -5.77853 | TTAGCCTTGAAAGCC GCCTCACCT GTGA ATGTGGGGC TTTTTTTTGGCAATT Shewmr7_3864 4588550 - 4590091 + | cytochrome c oxidase, subunit II Shewmr7_3865 4590101 - 4591693 + | cytochrome-c oxidase Shewmr7_3866 4591695 - 4592276 + | cytochrome C oxidase assembly protein TERM 5728 4592320 - 4592341 + G 76 -6.5 -4.53777 | overlap 4592304 CGCCCAGAGTGCTTG GCCGATTGT TGGT GCTATCGGC TTGTTTTTAATTGCC Shewmr7_3867 4592273 - 4593148 + | cytochrome c oxidase, subunit III Shewmr7_3868 4593323 - 4593177 - | hypothetical protein TERM 5729 4593406 - 4593392 - g 74 -4.3 -4.75356 | AAACACACTTAAAAA TGAAC GGGAT GTTCA TACGCTATCCTTATG TERM 5730 4593575 - 4593563 - g 80 -3.3 -5.24129 | overlap 4593564 GGGCCGCAGAAAAAA CCGAG CTA CTCGC ACAAATGGAGGCCAG Shewmr7_3869 4593352 - 4594263 + | hypothetical protein Shewmr7_3870 4594331 - 4594876 + | hypothetical protein Shewmr7_3871 4594876 - 4595934 + | cytochrome oxidase assembly TERM 5731 4596269 - 4596283 + G 73 -6.4 -4.49981 | GTTGTTCGCGGCACT CTTAGG CAG CCTAGG TTTTGTGATCCTCTA Shewmr7_3872 4595952 - 4596854 + | protoheme IX farnesyltransferase Shewmr7_3873 4596879 - 4597538 + | electron transport protein SCO1/SenC Shewmr7_3874 4598599 - 4597553 - | polysaccharide deacetylase Shewmr7_3875 4598621 - 4599991 + | MATE efflux family protein TERM 5732 4600444 - 4600474 + F 72 -9.9 -2.80821 | gap 1, opp_overlap 4600453, overlap 4600453 ATTTTAGTTAATAGG TTTGGAAA-ACGCG CATG CGCGTTTTTCCAGA TGGTGTATTTGGCAG TERM 5733 4600464 - 4600453 - f 73 -7.2 -4.09511 | opp_overlap 4600444 4600453 AATAGGTTTGGAAAA CGCG CATG CGCG TTTTTCCAGATGGTG TERM 5734 4600453 - 4600464 + F 81 -7.2 -4.60487 | opp_overlap 4600453, overlap 4600444 AATAGGTTTGGAAAA CGCG CATG CGCG TTTTTCCAGATGGTG Shewmr7_3876 4600590 - 4600949 + | hypothetical protein TERM 5735 4600989 - 4601008 + F 71 -10 -2.57463 | gap 1, overlap 4600969 4600980 4600988 4601007 CCGCTGGCCCTCCAC CGGACGGCT TTC AGCCG-CCG CTTATGGAAAGCGTT Shewmr7_3877 4601032 - 4601373 + | hypothetical protein Shewmr7_3878 4601452 - 4601823 + | hypothetical protein TERM 5736 4601859 - 4601841 - f 84 -11.7 -3.13343 | overlap 4601853 4601855 AGGCCAAGCACTTAA GCCAGCG AAAAA CGCTGGC CGGACAGCCACTGCG TERM 5737 4601892 - 4601853 - f 71 -4.8 -4.68424 | gap 1, opp_overlap 4601859 4601860, overlap 4601841 4601855 TAAGCCAGCGAAAAA CGCTGGC-CGGACAGCCAC TGC GTGGCTGCCCGTGTTGGTG GCGTTAGTGGTCAAG TERM 5738 4601859 - 4601886 + F 86 -12 -3.19157 | gap 1, opp_overlap 4601855 4601853, overlap 4601860 AGCGAAAAACGCTGG C-CGGACAGCCAC TGC GTGGCTGCCCGTG TTGGTGGCGTTAGTG TERM 5739 4601860 - 4601884 + F 100 -15.7 -3.15574 | opp_overlap 4601855 4601853, overlap 4601859 GCGAAAAACGCTGGC CGGACAGCCAC TGC GTGGCTGCCCG TGTTGGTGGCGTTAG TERM 5740 4602223 - 4602208 - g 72 -4 -4.88405 | AAGTTTTAAAGAAAA GCTCTT CGGC AAGAAC AAAATGAACGCTTCA TERM 5741 4602238 - 4602228 - g 72 -4 -4.89477 | TCGGCAAGAACAAAA TGAA CGC TTCA GACAGCTGCTTCGTA Shewmr7_3879 4601915 - 4602310 + | hypothetical protein TERM 5742 4602360 - 4602350 - T 71 -4.6 -4.74103 | overlap 4602335 CGTGCAATGCAAAAA GCGC ATT GCAC TGGACCTCGCTTCGC TERM 5743 4602841 - 4602803 - T 100 -12.8 -3.38986 | gap 1, opp_overlap 4602814, overlap 4602807 4602814 TAGTACAAACTAAGA GATATAAAAAACGCGAC TCTCTG GTCGCGTTTTTTAT-TC AGCTTAACAAATAAG TERM 5744 4602838 - 4602807 - T 100 -14.7 -3.17936 | opp_overlap 4602814, overlap 4602803 4602814 ACAAACTAAGAGATA TAAAAAACGCGAC TCTCTG GTCGCGTTTTTTA TTCAGCTTAACAAAT TERM 5745 4602831 - 4602814 - T 100 -8.4 -5.46276 | opp_overlap 4602814, overlap 4602807 4602803 AAGAGATATAAAAAA CGCGAC TCTCTG GTCGCG TTTTTTATTCAGCTT TERM 5746 4602814 - 4602831 + T 100 -9.1 -5.4756 | opp_overlap 4602814 4602807 4602803 AAGAGATATAAAAAA CGCGACT CTCT GGTCGCG TTTTTTATTCAGCTT Shewmr7_3880 4603436 - 4602858 - | putative DNA uptake protein Shewmr7_3881 4604399 - 4603593 - | competence protein ComF Shewmr7_3882 4604425 - 4605219 + | bioH protein Shewmr7_3883 4605281 - 4605835 + | hypothetical protein TERM 5747 4605895 - 4605866 - T 100 -12.3 -4.1585 | opp_overlap 4605872, overlap 4605872 GGATAAGTTTGAAAA TAAAAATGCCGCT AATC AGCGGCATTTTTC ATTCGGTTATTTACC TERM 5748 4605889 - 4605872 - T 100 -11.3 -5.45802 | opp_overlap 4605872, overlap 4605866 GTTTGAAAATAAAAA TGCCGCT AATC AGCGGCA TTTTTCATTCGGTTA TERM 5749 4605872 - 4605889 + T 100 -11.3 -4.90013 | opp_overlap 4605872 4605866 GTTTGAAAATAAAAA TGCCGCT AATC AGCGGCA TTTTTCATTCGGTTA Shewmr7_3884 4607866 - 4605902 - | sulfatase TERM 5750 4605953 - 4605968 + g 70 -3.2 -4.82901 | TAGGCTGCCCCACAG GGCC CAACCTAA GGCC TTTTTCTCCAACGCC TERM 5751 4606075 - 4606097 + g 73 -2.7 -4.98436 | GCAGGATAACCACAT CTTTACCTT CCATC AGGGCAAAG TTTTTATCGTATTGC TERM 5752 4608075 - 4608039 - R 100 -10.2 -5.37865 | opp_overlap 4608039 4608074, overlap 4608040 CTAACAAGTAAAAAA TGTCGACTCGAACACA AAGAA TGTATCCGAGCCGACC TGAGTTAGGTTACTT TERM 5753 4608074 - 4608040 - R 100 -13.7 -3.81092 | opp_overlap 4608039, overlap 4608039 TAACAAGTAAAAAAT GTCGACTCGAACACA AAGAA TGTATCCGAGCCGAC CTGAGTTAGGTTACT Shewmr7_3885 4610424 - 4608085 - | RNA-binding S1 domain-containing protein Shewmr7_3886 4610895 - 4610554 - | GreA/GreB family elongation factor TERM 5754 4611938 - 4611978 + G 73 -6.2 -4.48299 | gap 1, overlap 4611940 ACGCTCACACAGACT GTTTTCGGGCTGGAAAGGA TCAC TTCTTACT-GCCCGAAACC TTTCTTTCAATGTCA Shewmr7_3887 4611054 - 4612355 + | phage integrase family protein TERM 5755 4615807 - 4615792 - g 85 -4 -5.40072 | TCTTGGCGAAAAAAA TGCCTT GAAT AAAGCA ACAGAGACCCTTAAA TERM 5756 4616715 - 4616700 - g 74 -4 -5.03747 | AAAGCTGGGAAAAAA TCGACA GGCT TATCGA TGGTGATTTGGCTTT Shewmr7_3888 4612352 - 4616818 + | phage integrase family protein TERM 5757 4617351 - 4617336 - g 70 -3.3 -4.84017 | AAGCGGCGACAAAAA TTGGT GTTAGG ACCAA ATGGCAGTATATTAT Shewmr7_3889 4616820 - 4617440 + | hypothetical protein Shewmr7_3890 4617457 - 4617942 + | transcription elongation factor GreB Shewmr7_3891 4619402 - 4618026 - | helicase domain-containing protein Shewmr7_3892 4619923 - 4619396 - | hypothetical protein TERM 5758 4619648 - 4619660 + g 86 -6.3 -5.10461 | AGACTTATTCTCTGA TGCTT TTA AAGCA TTTTTATTGCCTGCA TERM 5759 4619994 - 4619980 - H 75 -7.2 -4.40993 | opp_overlap 4619980 CAGAAATCAGTAAAA CTTAGA AAA TCTAAG TTATCTAAGGTCACC Shewmr7_3893 4620024 - 4620347 + | XRE family transcriptional regulator Shewmr7_3894 4620337 - 4620795 + | hypothetical protein Shewmr7_3895 4621103 - 4621294 + | iSSod13, transposase TERM 5760 4621651 - 4621633 - g 80 -10.2 -3.72576 | overlap 4621616 CGGCGCTGCATCAAA CTGCCCGC CCT GCTGGCAG ACACTGATCACTTCT Shewmr7_3896 4621484 - 4621747 + | hypothetical protein TERM 5761 4621741 - 4621722 - T 74 -4.9 -4.84311 | opp_overlap 4621723, overlap 4621723 TTGCAGACAAGAAAA TGCCCCA AGCAAA TGGGGCT GATTGACCAAAAGTG TERM 5762 4621740 - 4621723 - T 71 -8.4 -3.49864 | opp_overlap 4621723, overlap 4621722 TGCAGACAAGAAAAT GCCCCA AGCAAA TGGGGC TGATTGACCAAAAGT Shewmr7_3897 4622181 - 4621774 - | hypothetical protein Shewmr7_3898 4629038 - 4622187 - | YD repeat-containing protein TERM 5763 4624315 - 4624327 + g 74 -6.9 -4.30576 | GTACCTGGCGCACTG CCGCC CGT GGTGG TTTTACTGGTAACGC TERM 5764 4626968 - 4626949 - G 78 -5.7 -4.86862 | opp_overlap 4626958 TGGAAAAAATGAAAA CCATCCC CAGTAT GGAATGG ATAAGTTGGAGCACT TERM 5765 4627964 - 4627947 - G 70 -2.7 -4.77567 | overlap 4627948 AGGCTGATAATAAAA TGTGATA TTCC TATCACC TAATGCGCCCAAACT TERM 5766 4629511 - 4629489 - R 71 -4.2 -4.87807 | GCAACACATTAAAAA CAAACAACTA ACT TAAGTGTTTG CGAATCCATCTTCCA Shewmr7_3899 4630223 - 4629627 - | phage integrase family protein Shewmr7_3900 4635313 - 4631771 - | hypothetical protein TERM 5767 4632199 - 4632239 + g 71 -6.8 -4.20918 | gap 1, overlap 4632236 TTCCATCTTGTTGTG TTCCCGGCGGCGTCTTCCA CTCA TGGAGCA-GCCGCCAGGCA TTTGTTGCAATTGCC TERM 5768 4633225 - 4633243 + g 100 -12.4 -4.59993 | GCAATGCCCACTTCG CATCGGCG AAC CGCCGGTG TTTGTTTGTGAATTT TERM 5769 4635477 - 4635447 - R 72 -9.9 -2.80821 | gap 1, opp_overlap 4635457, overlap 4635457 CTGCCAAATACACCA TCTGGAAAAACGCG CGAG CGCGT-TTTCCAAA CCTATTAACTAAAAT TERM 5770 4635457 - 4635468 + r 73 -7.2 -4.09511 | opp_overlap 4635457 4635447 CACCATCTGGAAAAA CGCG CGAG CGCG TTTTCCAAACCTATT TERM 5771 4635468 - 4635457 - R 81 -7.2 -4.60487 | opp_overlap 4635457, overlap 4635447 CACCATCTGGAAAAA CGCG CGAG CGCG TTTTCCAAACCTATT TERM 5772 4636253 - 4636266 + r 70 -5.9 -4.28774 | overlap 4636254 TGTCAAGGGGATCTT TGCGG TAAT CCGCG TTTTCACTTCGGTCG Shewmr7_3901 4636400 - 4636230 - | GreA/GreB family elongation factor ompR 4636774 - 4637499 + | osmolarity response regulator TERM 5773 4638136 - 4638113 - g 72 -3.8 -4.84761 | AGACGCTTACAAAAA GCCGCG ATCTCGGTCTCA CGCGGC GAATTTCCCGAACCT envZ 4637540 - 4638856 + | osmolarity sensor protein TERM 5774 4639232 - 4639214 - g 90 -9.6 -4.44797 | overlap 4639215 TGAGCAAGATTAAAA CTGAGCTC AGT GAGCTCAA CCTCGCCGCAGCGGG TERM 5775 4639231 - 4639215 - g 73 -10.9 -3.26155 | overlap 4639214 GAGCAAGATTAAAAC TGAGCTC AGT GAGCTCA ACCTCGCCGCAGCGG Shewmr7_3904 4638973 - 4640949 + | methyl-accepting chemotaxis sensory transducer TERM 5776 4640963 - 4640990 + T 100 -11.4 -5.14563 | opp_overlap 4640968, overlap 4640968 AAGCTTGATACCAAT AAAAATGGGAGC CTAG GCTCCCATTTTA TTTTTTAATCAGGCA TERM 5777 4640968 - 4640985 + T 100 -11.3 -5.45813 | opp_overlap 4640968, overlap 4640963 TGATACCAATAAAAA TGGGAGC CTAG GCTCCCA TTTTATTTTTTAATC TERM 5778 4640985 - 4640968 - T 100 -11.3 -5.16841 | opp_overlap 4640968 4640963 TGATACCAATAAAAA TGGGAGC CTAG GCTCCCA TTTTATTTTTTAATC Shewmr7_3905 4641479 - 4641006 - | redoxin domain-containing protein TERM 5779 4641630 - 4641653 + r 100 -15.4 -4.4261 | opp_overlap 4641630 TTGAAAAATAAAAAA GCAGCGTATC GATG GATACGCTGC TTTTAGTATTAGCCA TERM 5780 4641653 - 4641630 - R 100 -15.4 -5.93252 | opp_overlap 4641630 TTGAAAAATAAAAAA GCAGCGTATC GATG GATACGCTGC TTTTAGTATTAGCCA Shewmr7_3906 4642672 - 4641740 - | hypothetical protein Shewmr7_3907 4643031 - 4643333 + | peptidase Shewmr7_3908 4643335 - 4644018 + | two component transcriptional regulator Shewmr7_3909 4644011 - 4645375 + | periplasmic sensor signal transduction histidine kinase TERM 5781 4645568 - 4645601 + F 70 -5.4 -4.43477 | gap 1, opp_overlap 4645592 TTCTGCCGCGTTATC GTCCGTTTA-TGTAG AATAA CTACACTGCACGGAC TTTTCCTTGCATAAA Shewmr7_3910 4645790 - 4647295 + | hypothetical protein TERM 5782 4647331 - 4647312 - T 100 -12.2 -5.10461 | opp_overlap 4647312 CCGAGCCAATAAAAA TAGCGCGA ATAT TCGCGCTA TTTTTTTATGCCTAA TERM 5783 4647312 - 4647331 + T 100 -12.2 -5.64274 | opp_overlap 4647312 CCGAGCCAATAAAAA TAGCGCGA ATAT TCGCGCTA TTTTTTTATGCCTAA Shewmr7_3911 4647827 - 4647351 - | hypothetical protein Shewmr7_3912 4651532 - 4647903 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) Shewmr7_3913 4652165 - 4652485 + | hypothetical protein Shewmr7_3914 4652675 - 4653703 + | ubiquinol oxidase, subunit II TERM 5784 4655302 - 4655289 - g 76 -8.1 -4.26076 | overlap 4655300 TGACCGCGACCAAAA CCGTG ACAC CACGG GCGACCCATGGAATG TERM 5785 4655440 - 4655422 - g 84 -4.5 -5.28942 | GATGCCAAAGAAAAA GGCACTG CCTAT CAACGCC TCAAACACTATCAGC Shewmr7_3915 4653706 - 4655685 + | cytochrome-c oxidase TERM 5786 4655746 - 4655775 + G 70 -4.4 -4.71061 | gap 2, opp_overlap 4655754, overlap 4655752 4655755 GGAGCACCACGAGCA CCATGACACGGGTG GCAA CACCC-TGTT-TGG TTTTTGGCTCTACCT TERM 5787 4655755 - 4655768 + G 70 -8.1 -3.7557 | opp_overlap 4655754, overlap 4655752 4655746 CGAGCACCATGACAC GGGTG GCAA CACCC TGTTTGGTTTTTGGC Shewmr7_3916 4655687 - 4656307 + | cytochrome c oxidase, subunit III Shewmr7_3917 4656307 - 4656648 + | cytochrome C oxidase subunit IV TERM 5788 4657485 - 4657500 + G 76 -5.4 -4.8143 | ATATGCCACGTTGGG CCAGAC AAGT GTTTGG TTTTTCAATTATTAC Shewmr7_3918 4656662 - 4657594 + | protoheme IX farnesyltransferase TERM 5789 4657644 - 4657615 - T 100 -12.3 -4.66163 | opp_overlap 4657620, overlap 4657601 4657620 ACCTTTATTCAAAAA CAAAAGCGCTAAC CTAG GTTAGCGCTTTTT TATTGCCTTAATCCT TERM 5790 4657639 - 4657620 - T 100 -12.2 -5.2853 | opp_overlap 4657620, overlap 4657615 TATTCAAAAACAAAA GCGCTAAC CTAG GTTAGCGC TTTTTTATTGCCTTA TERM 5791 4657620 - 4657639 + T 100 -12.2 -5.5074 | opp_overlap 4657615 4657620 TATTCAAAAACAAAA GCGCTAAC CTAG GTTAGCGC TTTTTTATTGCCTTA TERM 5792 4657723 - 4657706 - T 76 -2.7 -5.32699 | overlap 4657713 TGAAAGAGGAAAAAA CAACTGA GTAA CCAGTTA CTAAAAGGTTTAAAT TERM 5793 4657808 - 4657835 + T 88 -12.6 -2.65264 | TCCATCCCTGGATGC TCGACCGCCCCG TCCA TGGGGCGGACGG TCGTCTCGCTAATCA Shewmr7_3919 4658396 - 4657944 - | hypothetical protein Shewmr7_3920 4658869 - 4658489 - | hypothetical protein Shewmr7_3921 4659774 - 4658989 - | hypothetical protein TERM 5794 4660178 - 4660140 - g 73 -5.5 -4.63486 | opp_overlap 4660169 AGCTTTGGAATAAAA CCG-ATCTACCAAAATCCC TGC AGGATTATG-TAGATGCGG TGCGTCACTTTAATG Shewmr7_3922 4659926 - 4660771 + | hypothetical protein Shewmr7_3923 4661530 - 4660811 - | lytic transglycosylase, catalytic Shewmr7_3924 4662558 - 4661530 - | hypothetical protein TERM 5795 4662602 - 4662567 - R 75 -8.3 -3.767 | overlap 4662569 4662601 TATTCATTCAGTAAA TATGTTTGCGGAGCC TATCTT GGCCCCGCAAATATC GAAGGATTACAGATA TERM 5796 4662600 - 4662569 - R 83 -10.9 -3.46647 | overlap 4662567 TTCATTCAGTAAATA TGTTTGCGGAGCC TATCTT GGCCCCGCAAATA TCGAAGGATTACAGA Shewmr7_3925 4663175 - 4662609 - | LemA family protein TERM 5797 4663008 - 4663018 + g 71 -6.8 -4.14472 | opp_overlap 4663008 TTCATGATCCATAAA TCGC TTG GCGA TTTTGAGGATATTGG TERM 5798 4663403 - 4663421 + H 100 -8.9 -5.40072 | opp_overlap 4663402 TTTGCTCGTGAATAC TGGACTC CTAGT GAGTCCA TTTTTTTACCCCGCA TERM 5799 4664921 - 4664959 + G 74 -4.5 -4.84359 | TTATCAACTTGATGC TGGGTAGCGCT-TCGGCCC AGT GGGCCATTACCGC-ACCCA TTTTTGTGCCCATGC Shewmr7_3926 4663642 - 4665249 + | AbgT putative transporter TERM 5800 4665267 - 4665306 + T 100 -16.6 -2.88231 | gap 1, opp_overlap 4665274, overlap 4665274 CGAGGTTTCCCCCTA GCAGAAAGGGCGTCGAAGC TAA GCT-CGACGCCCTTTTTGA TGTCCTAATTCTGGT TERM 5801 4665274 - 4665299 + T 100 -15.5 -4.82667 | gap 1, opp_overlap 4665274, overlap 4665267 TCCCCCTAGCAGAAA GGGCGTCGAAGC TAA GCT-CGACGCCC TTTTTGATGTCCTAA TERM 5802 4665299 - 4665274 - T 100 -15.5 -3.96148 | gap 1, opp_overlap 4665274 4665267 TCCCCCTAGCAGAAA GGGCGTCGAAGC TAA GCT-CGACGCCC TTTTTGATGTCCTAA Shewmr7_3927 4665635 - 4665336 - | hypothetical protein Shewmr7_3928 4665980 - 4665684 - | hypothetical protein TERM 5803 4666069 - 4666052 - R 100 -12.7 -5.09204 | opp_overlap 4666052 ATACGCTAACAAAAA GCCCTGC AGGT GCAGGGC TTTAATAGTGTTAGG TERM 5804 4666052 - 4666069 + r 100 -12.7 -3.84648 | opp_overlap 4666052 ATACGCTAACAAAAA GCCCTGC AGGT GCAGGGC TTTAATAGTGTTAGG TERM 5805 4666099 - 4666110 + r 89 -7.2 -5.011 | GCTGTAGATTACTCT GCCG AGGT CGGC TTTTCTTCTTTACCT Shewmr7_3929 4669226 - 4666092 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein Shewmr7_3930 4670384 - 4669236 - | RND family efflux transporter MFP subunit TERM 5806 4670292 - 4670306 + g 74 -8.5 -4.06384 | GCTCTGCGGCCCTGC GCCGC CATGA GCGGC TTTATCCTCTTGAGG TERM 5807 4670687 - 4670665 - H 74 -4.9 -4.80882 | opp_overlap 4670665 ACTCTATATCAAAAA TGTTGCAAA CATGT TTGGCAACA CAGGTTTCGTCACTA Shewmr7_3931 4671206 - 4671952 + | hypothetical protein TERM 5808 4672023 - 4672046 + T 100 -11 -5.38047 | overlap 4672024 TGAGATATCGAGCCT TGACCAGCCA AATT TGGCTGGTCC TTTTTTATCTAAATA TERM 5809 4672024 - 4672045 + T 100 -14.5 -3.81744 | overlap 4672023 GAGATATCGAGCCTT GACCAGCCA AATT TGGCTGGTC CTTTTTTATCTAAAT Shewmr7_3932 4672744 - 4672055 - | 3-methyladenine DNA glycosylase TERM 5810 4672288 - 4672303 + g 89 -10.4 -4.42806 | opp_overlap 4672257, overlap 4672289 GCCCCGTATTGCCAC CGAGGC GAGC GCCTCG TTTCTTTAAGAGTGC TERM 5811 4673503 - 4673534 + G 70 -10.8 -2.93073 | gap 1, opp_overlap 4673509, overlap 4673500 ACTCGTGCGTTATTG GCA-ACAGGCGCAGC TTC GCGGCGCCTGGATGC TGGTTCTTGAAGAGG TERM 5812 4673527 - 4673509 - g 74 -11.6 -3.04144 | opp_overlap 4673503 4673500 GCGTTATTGGCAACA GGCGCAGC TTC GCGGCGCC TGGATGCTGGTTCTT Shewmr7_3933 4672952 - 4673599 + | glutathione S-transferase domain-containing protein Shewmr7_3934 4674140 - 4673610 - | hypothetical protein TERM 5813 4674205 - 4674250 + r 86 -11.9 -3.00908 | opp_overlap 4674220, overlap 4674220 GAGGGCAAGCGAGAT CTAGCTCACAAAAAAGGCGCC AAAT GGCGCCTTTTTTATGCTCAAG CTTTCCTATTTAGTG TERM 5814 4674220 - 4674235 + r 100 -11.8 -5.31275 | opp_overlap 4674220, overlap 4674205 CTAGCTCACAAAAAA GGCGCC AAAT GGCGCC TTTTTTATGCTCAAG TERM 5815 4674235 - 4674220 - R 100 -11.8 -5.26316 | opp_overlap 4674220 4674205 CTAGCTCACAAAAAA GGCGCC AAAT GGCGCC TTTTTTATGCTCAAG Shewmr7_3935 4676309 - 4674270 - | oligopeptidase A Shewmr7_3936 4676519 - 4677355 + | hypothetical protein Shewmr7_3937 4677457 - 4677987 + | hypothetical protein Shewmr7_3938 4678155 - 4679510 + | glutathione reductase TERM 5816 4679536 - 4679551 + F 100 -9 -5.84381 | opp_overlap 4679536 4679535 TTCAAAAACTTAAAG GCCAGA ATTG TCTGGC TTTTTTTATTACTCA TERM 5817 4680076 - 4680064 - g 74 -7.7 -4.19238 | GCCTCAACCTTAAAA TAGGC CAA GCCTA TGATACGGGTGAAGA Shewmr7_3939 4679880 - 4680701 + | hypothetical protein TERM 5818 4680735 - 4680768 + F 70 -7.5 -3.85817 | overlap 4680738 CATCCCCAGTTGTTT GATGAAGAAGCCC AATCGAAA GGGTTTCTTCCTC TTTCTGCCACGGCCT TERM 5819 4682132 - 4682152 + G 76 -11.1 -3.2964 | opp_overlap 4682120, overlap 4682120 TCAGCGGCTTCCTAC TGGCAGCGA TCC TCGCGGCCA TTATGAGCACGATTT Shewmr7_3940 4681156 - 4682652 + | sodium/proline symporter TERM 5820 4682724 - 4682698 - g 77 -10.8 -3.53811 | CGTATCGTCGTCAAA GTGGGGAGCG CCTTAAT CGCGCCCCAC AAGCAAGGTTGCAGT Shewmr7_3941 4682662 - 4683768 + | gamma-glutamyl kinase TERM 5821 4683917 - 4683901 - g 76 -2.9 -5.17576 | CATTAAGGGAAAAAA GCTATGA AAT CCAAAGC GCGAACCTGATTGAC Shewmr7_3942 4683780 - 4685027 + | glutamate-5-semialdehyde dehydrogenase TERM 5822 4685059 - 4685091 + T 100 -15.7 -3.69323 | opp_overlap 4685063, overlap 4685063 TGATTTACTAAATAA TAAAGCCCCAAGGCA TTC TCCCTTGGGGCTTTG TTTAAGTGCTCGTCA TERM 5823 4685063 - 4685087 + T 100 -14.3 -4.47183 | opp_overlap 4685063, overlap 4685059 TTACTAAATAATAAA GCCCCAAGGCA TTC TCCCTTGGGGC TTTGTTTAAGTGCTC TERM 5824 4685087 - 4685063 - T 100 -14.3 -4.60258 | opp_overlap 4685063 4685059 TTACTAAATAATAAA GCCCCAAGGCA TTC TCCCTTGGGGC TTTGTTTAAGTGCTC Shewmr7_3943 4685554 - 4685129 - | SH3 type 3 domain-containing protein TERM 5825 4685928 - 4685894 - R 78 -10.1 -3.55444 | CCGTCAGGCCGCAAA GCTCAGCGTAAATCA AATAG TGATTTACGCTGCCC CATCACACTGCGATT Shewmr7_3944 4687450 - 4685918 - | XRE family transcriptional regulator TERM 5826 4686104 - 4686124 + g 83 -9.6 -4.21194 | AATTGCGACTGAGCC GCCGCCAG AGACA CAGGCGGC TTTTAAATCATGGGC TERM 5827 4686617 - 4686599 - G 73 -3 -5.00616 | GGCTCCGGCAAAAAA GCTGGACT CAA AGTCGCGC CACGCATGTAAAATA TERM 5828 4687162 - 4687130 - G 85 -4.1 -5.46706 | gap 1, opp_overlap 4687156, overlap 4687132 ATTTGAAAACAAAAA GCTGGGTTCGAGCG CCATGC CGCT-GATCCCACC ACGGCGCCCCTTGTC TERM 5829 4687378 - 4687398 + g 72 -3.9 -4.87665 | overlap 4687386 CCATGGTTAAATTGT TACGTTTCC GTA GGTTACGTA TTTTTGTCCCTAGGA Shewmr7_3945 4687659 - 4688222 + | malate synthase TERM 5830 4688241 - 4688265 + F 100 -16.5 -4.59773 | CCGCGTATTTTCACG GGAGAGTTGCC GTC GGCGACTCTCC TTTTTAAGCCTCAAA Shewmr7_3946 4688488 - 4689438 + | hypothetical protein Shewmr7_3947 4689640 - 4689488 - | hypothetical protein Shewmr7_3948 4690292 - 4689747 - | LuxR family transcriptional regulator TERM 5831 4690052 - 4690066 + g 100 -8.6 -5.61596 | CGGAGCGCATTTGGG TCGACA TAT TGTCGA TTTTTTTATCGGCGT TERM 5832 4690760 - 4690746 - g 70 -2 -5.02357 | overlap 4690748 GATAAGCAAATAAAA CAGCTC GCC GAGCAA ATTCATCAACAACAA TERM 5833 4691165 - 4691151 - g 70 -8.6 -3.73106 | overlap 4691142 4691157 CTAAAACTGCAACAA CAGCAA CAC TTGCTG CTGATCCAAACTCAG Shewmr7_3949 4690437 - 4691639 + | hypothetical protein TERM 5834 4691784 - 4691819 + G 70 -11.2 -2.51133 | gap 1, overlap 4691783 4691786 GTTATGAGGGCAGTC CATTGCCGGCGCAGGTT GAA ATCCTCC-CCGGCAATG ATTACTGGATCAGTA TERM 5835 4692301 - 4692257 - g 74 -10.1 -3.5393 | gap 1, opp_overlap 4692257 4692256, overlap 4692262 AGCATCCGCGTCAAA GTGAATGTGCCGACAGGGCA GTCTCA TTCCCTGTCGGC-CATCAAC ATTAATCAATGCCAT TERM 5836 4692296 - 4692262 - g 73 -10.8 -3.27525 | gap 1, opp_overlap 4692257 4692256, overlap 4692257 CCGCGTCAAAGTGAA TGTGCCGACAGGGCA GTCTCA TTCCCTGTCGGC-CA TCAACATTAATCAAT Shewmr7_3950 4691636 - 4692664 + | hypothetical protein TERM 5837 4692889 - 4692877 - g 70 -9.1 -3.64703 | CCGTCCCGATTGAAA CCGAG CTG CTCGG CATTCCGCGGCAATC Shewmr7_3951 4692666 - 4695719 + | CzcA family heavy metal efflux protein Shewmr7_3952 4695716 - 4696021 + | hypothetical protein TERM 5838 4696029 - 4696054 + T 80 -9.1 -3.93288 | opp_overlap 4696029 TTTCCTAACGATAAA GGGCATACA AAACCTGC TGTATGCCC TTTGATTAACTACAG TERM 5839 4696054 - 4696029 - T 86 -9.8 -4.05446 | opp_overlap 4696029 TTTCCTAACGATAAA GGGCATACAA AACCTG CTGTATGCCC TTTGATTAACTACAG Shewmr7_3953 4696699 - 4696064 - | paraquat-inducible protein A Shewmr7_3954 4698039 - 4696804 - | metal dependent phosphohydrolase Shewmr7_3955 4698455 - 4698216 - | hypothetical protein Shewmr7_3956 4699200 - 4698463 - | hypothetical protein Shewmr7_3957 4699758 - 4699216 - | hypothetical protein Shewmr7_3958 4700438 - 4699755 - | cobalt transport protein Shewmr7_3959 4701795 - 4700428 - | ABC transporter related TERM 5840 4700889 - 4700857 - G 70 -8.4 -3.71848 | opp_overlap 4700858 4700863 CCTTTGCAGCAATAA CCCTAACTCGGCGC CGTAC ACACCGAGTTTAGG TTTACGGCCTAGCAC TERM 5841 4701486 - 4701505 + g 72 -10 -3.48276 | opp_overlap 4701485 CCTTAGGCAACATAT TCTCGGCG GGGA TGCCGAGA TTCTCTAAGGCGAAG Shewmr7_3960 4704022 - 4701797 - | TonB-dependent receptor, plug TERM 5842 4702569 - 4702551 - G 73 -8.8 -3.76952 | opp_overlap 4702558, overlap 4702545 TCGAGTGAATGGAAA GCCCCACC TAA GGTGAAGC CATAGTTATGTTCTG TERM 5843 4704182 - 4704168 - H 74 -5 -4.76423 | overlap 4704161 CACAAAGAGACAAAA TGTCCA ACA TAGACA ACGGTATCGACAAAA TERM 5844 4704212 - 4704199 - H 91 -8.1 -4.87665 | opp_overlap 4704198 CGGTATCGACAAAAA GACCC ATCT GGGTC ACATTTTTTAGCGCC Shewmr7_3961 4704431 - 4705789 + | isochorismate synthases Shewmr7_3962 4706527 - 4705802 - | hypothetical protein Shewmr7_3963 4706776 - 4707429 + | hypothetical protein TERM 5845 4707475 - 4707509 + F 82 -7.9 -4.52589 | gap 1, overlap 4707507 TGAGCAGTTTTTAGT TCAGCCCC-ACTGTGT TTAT GCGCATTTGGGGCTGA TTTTCTGTGAGAGAA TERM 5846 4707842 - 4707824 - g 89 -10.2 -4.33153 | overlap 4707816 TGGAATACCAAGAAA CCTGGGCG AGC CGCCAAGG CTACAAGCTGATCCA TERM 5847 4708001 - 4707964 - g 71 -7.2 -3.97947 | gap 2, opp_overlap 4707964 4707965, overlap 4707965 CTGATCGACCATAAA CTGCATTTAAGCAAGTCG ATTG CGACT-GCTTAAAGGC-G ATTTACATAAAAAAG Shewmr7_3964 4707529 - 4707996 + | acetyltransferase TERM 5848 4708176 - 4708194 + T 100 -10.3 -6.11019 | ACACACTCTTTTGTG GCCGGAT TCATC ATCCGGC TTTTTTTTGCTTTTT Shewmr7_3965 4710387 - 4708252 - | periplasmic sensor signal transduction histidine kinase TERM 5849 4708498 - 4708476 - G 72 -4 -4.77759 | overlap 4708466 4708478 AGAAGGGATCAAAAA TCCGCCCTAG CTG CTCAGGCGCA ATCCCCGAACCTTCG Shewmr7_3966 4711818 - 4710388 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 5850 4710945 - 4710955 + g 79 -8.2 -4.371 | TCTCACTGCCGACGG GGCG AAT CGCC TTTTGCTCTAATACC Shewmr7_3967 4712055 - 4712879 + | extracellular solute-binding protein TERM 5851 4712903 - 4712923 + G 100 -12.6 -4.4078 | TGGCTAGCACTGTTA CAGCAGGC GTTAA GCCTGCTG TTTTCATTGGACCCC Shewmr7_3968 4712876 - 4713583 + | binding-protein-dependent transport systems inner membrane component Shewmr7_3969 4713587 - 4714294 + | ABC transporter related Shewmr7_3970 4714278 - 4714871 + | molybdenum cofactor guanylyltransferase TERM 5852 4715518 - 4715501 - g 76 -5.5 -4.87665 | opp_overlap 4715508 4715509 GGGCAGCGATAAAAA CCTCAGC GTGA GCCAAGG CTTGGCGCAGATTTT Shewmr7_3971 4714902 - 4716701 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 5853 4716864 - 4716882 + G 80 -10.3 -3.76492 | GCACCTCGAAGAGTT GGCTTGG ATTGC CCAAGCC TTTACTGAACTTGGG TERM 5854 4717412 - 4717393 - g 79 -9.2 -4.1673 | opp_overlap 4717393 CAACTTTCCAATAAA CGCACAGG CGGC CCCGCGCG TTACTACACCATGGC Shewmr7_3972 4716718 - 4717701 + | molybdenum cofactor biosynthesis protein A TERM 5855 4717928 - 4717914 - g 77 -11.4 -3.40403 | GTTGTTTGATGACAA TGCGCC GCT GGCGCA GTTACAACTCGATGG Shewmr7_3973 4717783 - 4718238 + | hypothetical protein TERM 5856 4718999 - 4718965 - g 70 -2.9 -4.83615 | gap 2, overlap 4718966 TATTTCGCACAAAAA CTGCATGTTTACGGCCG CGG CGG-CG-AAACTTGCAC TCAGTGCGGCAATCT Shewmr7_3974 4718263 - 4719078 + | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase TERM 5857 4719086 - 4719119 + T 100 -15.5 -3.75657 | opp_overlap 4719094, overlap 4719094 CGCGTTAATCTCGCC GATAAAAATGCCTGC AATT GCAGGCATTTTTAGC TTCTTCGATATTTAC TERM 5858 4719111 - 4719094 - T 100 -11.3 -4.82901 | opp_overlap 4719086 4719094 TCTCGCCGATAAAAA TGCCTGC AATT GCAGGCA TTTTTAGCTTCTTCG TERM 5859 4719094 - 4719111 + T 100 -11.3 -4.8143 | opp_overlap 4719094, overlap 4719086 TCTCGCCGATAAAAA TGCCTGC AATT GCAGGCA TTTTTAGCTTCTTCG Shewmr7_3975 4720855 - 4719131 - | glycosyl transferase family protein Shewmr7_3976 4721528 - 4720869 - | hypothetical protein TERM 5860 4721071 - 4721058 - G 79 -8.1 -4.32857 | opp_overlap 4721058, overlap 4721060 GCTGCCAAACATAAA TCCCC CCGC GGGGA TGTGTGTCGCCCCCG TERM 5861 4721511 - 4721496 - G 73 -5.4 -4.73614 | opp_overlap 4721496 CACCAGCAAAATAAA GACGAT AAAA ATCGCC TTATAGAGTCGCTTC Shewmr7_3977 4722261 - 4721530 - | glycosyl transferase family protein TERM 5862 4722368 - 4722356 - H 74 -7.7 -3.90901 | opp_overlap 4722356, overlap 4722351 ATGAATTAAACAGAA TGCTG GCG CAGCA TTGTATACTCATAAA Shewmr7_3978 4722429 - 4723658 + | UDP-glucose/GDP-mannose dehydrogenase Shewmr7_3979 4723683 - 4724690 + | UDP-glucuronate 5'-epimerase TERM 5863 4724733 - 4724753 + T 100 -12.6 -4.73682 | GGTTGACAGTTTTTA GGCCAGCT CCAGT AGCTGGCC TTTTCTATTGTGCAC Shewmr7_3980 4725533 - 4724730 - | integrase catalytic subunit TERM 5864 4724944 - 4724964 + g 71 -11.1 -2.79327 | opp_overlap 4724944, overlap 4724943 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 5865 4724964 - 4724944 - G 79 -11.1 -3.54029 | opp_overlap 4724944 4724943 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 5866 4725239 - 4725289 + g 70 -2.6 -5.01546 | gap 1, opp_overlap 4725256 CATCATGCAGTCCTT CCTCTTTCAGCAGAT-TAGGATG CTTCTT CATCCAGTGTTTGCTGAACGTGG TTTTTGTGTAGCTTT TERM 5867 4725535 - 4725561 + r 76 -6.6 -4.43877 | opp_overlap 4725535, overlap 4725535 4725550 CCTTGCCTCGACATA CC-CGCAGCACG ACATG CG-GCTGCGAGG TTTATTTCGCCGTTG TERM 5868 4725550 - 4725577 + r 71 -4 -4.8622 | opp_overlap 4725535, overlap 4725535 4725535 CCCGCAGCACGACAT GCGGCTGCGAGG TTTA TTTCGCCGTTGC TTTTTGCTTGCCAGA Shewmr7_3981 4725958 - 4725563 - | transposase TERM 5869 4726014 - 4726033 + r 95 -7.8 -5.13741 | opp_overlap 4726015, overlap 4726015 ATGCAGATACAAAAA AGCCTGCT GATT AGCAGGCC TTTTTATTGGATTGG TERM 5870 4726015 - 4726032 + r 90 -11.3 -3.6716 | opp_overlap 4726015, overlap 4726014 TGCAGATACAAAAAA GCCTGCT GATT AGCAGGC CTTTTTATTGGATTG TERM 5871 4726032 - 4726015 - R 100 -11.3 -5.4251 | opp_overlap 4726015 4726014 TGCAGATACAAAAAA GCCTGCT GATT AGCAGGC CTTTTTATTGGATTG Shewmr7_3982 4727524 - 4726052 - | hypothetical protein TERM 5872 4726212 - 4726235 + g 79 -12.4 -3.19449 | overlap 4726213 4726214 4726215 TCTTCCTTCGGTGGC TGTGGCGCCC ATGT GGTCGCCACA TTGGTGCCGTCTTTA TERM 5873 4726213 - 4726246 + g 88 -10.3 -4.20918 | gap 1, overlap 4726212 4726214 4726215 CTTCCTTCGGTGGCT G-TGGCGCCCATGTGG TCG CCACATTGGTGCCGTC TTTATTCAACTTGGC TERM 5874 4726214 - 4726244 + g 93 -14 -3.70139 | overlap 4726212 4726213 4726215 TTCCTTCGGTGGCTG TGGCGCCCATGTGG TCG CCACATTGGTGCCG TCTTTATTCAACTTG TERM 5875 4726215 - 4726243 + g 84 -15.3 -2.8136 | overlap 4726212 4726214 4726213 TCCTTCGGTGGCTGT GGCGCCCATGTGG TCG CCACATTGGTGCC GTCTTTATTCAACTT TERM 5876 4727227 - 4727246 + g 79 -8.6 -4.30576 | gap 1 GTTTAACCCTAGCAT TGCCG-CGA TTA TCGACGGCA TTTTGATAGTAAAAG coaD 4728081 - 4727590 - | phosphopantetheine adenylyltransferase TERM 5877 4728456 - 4728486 + G 87 -9.8 -4.36914 | overlap 4728458 AAGCCGGGCAAGATG TTCACCTCTTTGTG TTC CATAAAGAGGGGGA TTTTATGCCACCAGA TERM 5878 4728586 - 4728574 - g 73 -9.1 -3.80745 | overlap 4728566 AAGACAACACCTAAA GGCCA AGG TGGCC GAAGCGGAACAATCG Shewmr7_3984 4728356 - 4729426 + | glycosyl transferase, group 1 TERM 5879 4729484 - 4729428 - f 100 -12.1 -4.35885 | gap 1, opp_overlap 4729444 4729447 ACTTAGCACAATAAA TTACCACTTTTAATTAGAACGCCATT TCTTAT ATTGGCGTTCTAATTAAAA-TAGCAA CAAATTGATACGATA Shewmr7_3985 4729741 - 4730913 + | glycosyl transferase, group 1 TERM 5880 4730916 - 4730942 + T 100 -9.4 -5.06414 | opp_overlap 4730917, overlap 4730920 AGCACAAAGCTAAAA ACAAGGCCGACA CTA TGTCGGCCTTAC TTTTTCTTAAAACAA TERM 5881 4730941 - 4730917 - T 100 -15.1 -4.84529 | opp_overlap 4730916 4730920 GCACAAAGCTAAAAA CAAGGCCGACA CTA TGTCGGCCTTA CTTTTTCTTAAAACA TERM 5882 4730920 - 4730938 + T 100 -14.6 -3.9407 | opp_overlap 4730917, overlap 4730916 CAAAGCTAAAAACAA GGCCGACA CTA TGTCGGCC TTACTTTTTCTTAAA Shewmr7_3986 4732025 - 4730949 - | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase Shewmr7_3987 4733130 - 4732045 - | glycosyl transferase, group 1 Shewmr7_3988 4734205 - 4733183 - | glycosyl transferase family protein TERM 5883 4734944 - 4734919 - g 86 -8.9 -4.54727 | overlap 4734942 GGGGTGAAATCAAAA CGCCCCATGCC CAAT GGCAGAAGGCG AACCTTGATAGGTTG Shewmr7_3989 4734315 - 4735067 + | 3-deoxy-D-manno-octulosonic-acid kinase Shewmr7_3990 4736407 - 4735082 - | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein TERM 5884 4736465 - 4736410 - H 71 -8.4 -3.42574 | gap 1, opp_overlap 4736424 GCAATGTTAGCATAA TATCCCCAAGCGTCCTCAAGATAC-GA GTT TCAGCCTCTTGAGATTGTTTGGGGATA TCAATCGTATTGAAT Shewmr7_3991 4736602 - 4737249 + | TetR family transcriptional regulator Shewmr7_3992 4737520 - 4738713 + | 2-amino-3-ketobutyrate coenzyme A ligase tdh 4738725 - 4739750 + | L-threonine 3-dehydrogenase Shewmr7_3994 4739849 - 4740154 + | rhodanese domain-containing protein Shewmr7_3995 4740151 - 4740993 + | rhomboid family protein TERM 5885 4741023 - 4741058 + T 82 -10.4 -3.57615 | opp_overlap 4741027, overlap 4741024 4741027 TTCCAAGCTCGATTA AAAAGCAGGGTAAGCC TTAA GGCTTACCCTGCTGCA TTTAGGCGCTGTTAC TERM 5886 4741024 - 4741057 + T 95 -13.9 -2.74248 | opp_overlap 4741027, overlap 4741023 4741027 TCCAAGCTCGATTAA AAAGCAGGGTAAGCC TTAA GGCTTACCCTGCTGC ATTTAGGCGCTGTTA TERM 5887 4741054 - 4741027 - T 100 -20 -4.73388 | opp_overlap 4741024 4741023 4741027 AAGCTCGATTAAAAA GCAGGGTAAGCC TTAA GGCTTACCCTGC TGCATTTAGGCGCTG TERM 5888 4741027 - 4741054 + T 100 -20 -2.64472 | opp_overlap 4741027, overlap 4741024 4741023 AAGCTCGATTAAAAA GCAGGGTAAGCC TTAA GGCTTACCCTGC TGCATTTAGGCGCTG Shewmr7_3996 4741726 - 4741070 - | isoprenoid biosynthesis protein TERM 5889 4743031 - 4743021 - g 71 -6.8 -4.25848 | AAGGTCGCAGCAAAA GTCG AAA CGAC CGAAACCCAAGAAGA TERM 5890 4743663 - 4743649 - g 72 -3.5 -4.87389 | opp_overlap 4743649 4743660 GACTCGAAAAAGAAA CCGAA TTAGC CTCGG TCTTTACCGATATTG TERM 5891 4743905 - 4743895 - g 80 -2.4 -5.52384 | CGGTCATCAAAAAAA CCCC TAA GGGC GCCCCCTCTACCGCG TERM 5892 4744280 - 4744266 - g 77 -10 -3.65351 | GCAGGCTTACTCAAA GCCTTC GCC GAAGGC AAAGACATCCACAGA TERM 5893 4744681 - 4744665 - g 74 -2.2 -5.20216 | opp_overlap 4744672 GATATCATTAAAAAA GCCATG ATCAG CATTGC CGATTGGATAAAAAC Shewmr7_3997 4742112 - 4744880 + | DNA polymerase I TERM 5894 4744932 - 4744955 + T 100 -10.3 -4.3851 | opp_overlap 4744932 GCTAACCCATACTAA GGCTCATCC GTTACA GGATGGGCC TTTATATTTGGTGTA TERM 5895 4745527 - 4745551 + T 100 -15.8 -5.9663 | opp_overlap 4745520, overlap 4745516 GAGCCAAATTCTGGC GCCCCAGCAA CTTGT TTGCTGGGGC TTTTTTTTGCTCTTT TERM 5896 4745730 - 4745755 + T 100 -8.3 -5.40072 | overlap 4745732 AAAGAGCTAAAATTT TGGCCGGTGAC TAAT GTTATCGGCTA TTTTTTTGCCCAAAA TERM 5897 4745732 - 4745753 + T 86 -8.7 -4.34482 | overlap 4745730 AGAGCTAAAATTTTG GCCGGTGAC TAAT GTTATCGGC TATTTTTTTGCCCAA TERM 5898 4745846 - 4745819 - T 100 -9.9 -4.56367 | TATTGCAGAAAGAAA TGGCCGAATGC ACTCTG GCATCCGACCA TAAAGCAAAAGGCTT Shewmr7_3998 4746519 - 4745860 - | GTPase EngB TERM 5899 4746498 - 4746484 - G 78 -6.4 -4.7497 | overlap 4746485 TGCACTGATTAAAAA CTTCGC CCT GCGAAA ATCTATATGAGATTC Shewmr7_3999 4746689 - 4747312 + | cytochrome c, class I TERM 5900 4747331 - 4747346 + F 89 -6.1 -5.31275 | opp_overlap 4747331 TTAGCGATAAAAAAA GGGTG CACTGT CACCC TTTTTTATCATCACA TERM 5901 4747346 - 4747331 - f 100 -6.1 -5.64274 | opp_overlap 4747331 TTAGCGATAAAAAAA GGGTG CACTGT CACCC TTTTTTATCATCACA TERM 5902 4747381 - 4747364 - f 77 -8.5 -3.99324 | TTTTATCATCACAAA GTTTACG TTAA CGTAAAC TGATAAAGATTCATG TERM 5903 4747709 - 4747689 - f 81 -11.3 -2.82516 | overlap 4747691 TGCCCCATCAGGACA CAGTTTGAA TGA TTCAAACTG TAGCAAAGGAAGCTA TERM 5904 4748013 - 4748033 + F 100 -16.9 -5.73978 | ATGTACCGTTTGTAA GGCGGCAGT TTA ACTGCCGCC TTTTTTCTTTGTGAT Shewmr7_4000 4748137 - 4748775 + | hypothetical protein Shewmr7_4001 4748858 - 4749412 + | hypothetical protein TERM 5905 4749469 - 4749414 - f 70 -8.1 -3.63707 | gap 3, opp_overlap 4749434, overlap 4749406 4749422 4749424 4749434 AAGATAAGTTTTAAA TCTTAGAACATGCATAAAAACAAAGCGC TCA GC-CTTTGTTTTTATGCA-G-TCTAAAC AAGGAGTTTACGTGT TERM 5906 4749462 - 4749422 - f 100 -13 -3.39668 | gap 2, opp_overlap 4749434, overlap 4749414 4749424 4749434 TTTTAAATCTTAGAA CATGCATAAAAACAAAGCGC TCA GC-CTTTGTTTTTATGCA-G TCTAAACAAGGAGTT TERM 5907 4749461 - 4749424 - f 100 -16.7 -3.2665 | gap 1, opp_overlap 4749434, overlap 4749422 4749414 4749434 TTAAATCTTAGAACA TGCATAAAAACAAAGCGC TCA GC-CTTTGTTTTTATGCA GTCTAAACAAGGAGT TERM 5908 4749451 - 4749434 - f 77 -4.9 -4.91459 | gap 1, opp_overlap 4749434, overlap 4749424 4749422 4749414 GAACATGCATAAAAA CAAAGCGC TCA GC-CTTTG TTTTTATGCAGTCTA TERM 5909 4749434 - 4749451 + F 74 -4.9 -4.8667 | gap 1, opp_overlap 4749424 4749422 4749414 4749434 GAACATGCATAAAAA CAAAGCGC TCA GC-CTTTG TTTTTATGCAGTCTA TERM 5910 4749619 - 4749577 - g 76 -8.5 -4.24283 | overlap 4749574 AAGCAACAGAAACAA CGCCAACAGACGC-TCACTGC CGA GC-GTGAAGCGGCTGCTAACG CGAAGCGCGCCCAAG Shewmr7_4002 4749481 - 4749948 + | hypothetical protein TERM 5911 4749948 - 4750006 + F 71 -4.5 -4.64861 | gap 1, opp_overlap 4749949, overlap 4749949 4749970 AAAAGCCCCACATTA AGCTGGCGGCATTAG-CCTCAAGGCCAA AACC TTGGCTTTGAGGCCCAATCGCTCCCGCA TTTCTTTTCCCACAC Shewmr7_4003 4750243 - 4751583 + | coproporphyrinogen III oxidase TERM 5912 4751625 - 4751608 - T 91 -7 -5.45652 | opp_overlap 4751608 ATCTCCAATAAAAAA TCCGAC TCGAAT GTCGGA TTTTTTATTGGGAAA TERM 5913 4751608 - 4751625 + T 91 -7 -5.4505 | opp_overlap 4751608 ATCTCCAATAAAAAA TCCGAC TCGAAT GTCGGA TTTTTTATTGGGAAA Shewmr7_4004 4752649 - 4751654 - | adenosine deaminase TERM 5914 4752963 - 4752949 - g 90 -10 -4.5123 | AATCCACCAAACAAA CAACGG TAG CCGTTG CGCAGTCCACAGCCA TERM 5915 4753032 - 4753018 - g 71 -5.7 -4.37886 | CTATTGTGGATAAAA GTTGG CAACT CCAAC TCAGTGCCAGCCCTG Shewmr7_4005 4752861 - 4754666 + | hypothetical protein TERM 5916 4754678 - 4754701 + F 78 -9.5 -3.72576 | TTAAGCTCATCCGAA GGGAGCGGG TATTTT CCAGCTCCC TTTCCTGCCCGCCCC Shewmr7_4006 4754769 - 4755782 + | alpha/beta hydrolase fold Shewmr7_4007 4758189 - 4755739 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 5917 4756400 - 4756371 - G 76 -11.6 -3.31461 | gap 1, opp_overlap 4756362, overlap 4756355 4756354 4756376 TAGCGACGGGGATAA TATCACCGTTGGC TAAAT GCCAACGG-GATA AGACTTCGGCAGCGA TERM 5918 4756396 - 4756376 - G 77 -12.6 -2.80252 | opp_overlap 4756362, overlap 4756355 4756354 4756371 ACGGGGATAATATCA CCGTTGGC TAAAT GCCAACGG GATAAGACTTCGGCA TERM 5919 4757523 - 4757505 - G 74 -6.7 -4.42386 | TCTGTAGGGATAAAA CCTCGGA CGCGC TCCAAGG CACTTGAGTTGAAAA TERM 5920 4758412 - 4758380 - R 100 -19.4 -4.70879 | opp_overlap 4758380 4758383 GGCAAACGCGAAAAA CAATGAAGCCAGCT TATTC AGCTGGCTTCATTG TTTAATTAGGCGCTT TERM 5921 4758380 - 4758412 + r 100 -19.4 -3.90856 | opp_overlap 4758380, overlap 4758383 GGCAAACGCGAAAAA CAATGAAGCCAGCT TATTC AGCTGGCTTCATTG TTTAATTAGGCGCTT TERM 5922 4758383 - 4758409 + r 100 -15.3 -4.0825 | opp_overlap 4758380, overlap 4758380 AAACGCGAAAAACAA TGAAGCCAGCT TATTC AGCTGGCTTCA TTGTTTAATTAGGCG TERM 5923 4758703 - 4758715 + r 72 -6.3 -4.2586 | AGCTGGTTTGAGTGC CACTT CTT AAGTG TTTGTATTCGTCTAA TERM 5924 4759917 - 4759889 - R 72 -8.1 -3.85698 | TGTGTTTTTGATAAA CAGTTGCAGCCAC CTG GTATCTGCGACTG CCGTCAGCTTAGGGA TERM 5925 4760371 - 4760387 + r 85 -9.4 -4.08546 | overlap 4760353 TTGGTCTTTCGGCGA GGGGGT TTTTC ACCCCC TTTATCGTTACTCAT TERM 5926 4761169 - 4761181 + r 83 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5927 4761745 - 4761785 + r 84 -2.7 -5.63374 | opp_overlap 4761752 4761757 4761759 4761761, overlap 4761759 GGACTCGCCTTAGAC TTGAATATTCAAGACACTT AAA AAGTGTTTTAAGAACTCAA TTTTTTTCGTATTAA TERM 5928 4763612 - 4763634 + r 70 -7.1 -3.76952 | gap 1 TGATTTAAATTTTGA TTACTC-GCC AAAC GGCAGAGTAA TTTCGATTAACTCAA TERM 5929 4763739 - 4763753 + r 73 -8.6 -3.63805 | TCAGCGGGTCAGGGC TGCGTA TTC TACGCA TTTCCCGTGTCGCGT TERM 5930 4763997 - 4763968 - R 100 -14.5 -3.39717 | opp_overlap 4763975, overlap 4763975 ATCCAGCAACATGAA TAAAAAAGGGGCT AAAC AGCCCCTTTTTCA ATGCATTTACTTAAC TERM 5931 4763975 - 4763990 + r 100 -10.4 -4.69027 | opp_overlap 4763975 4763968 AACATGAATAAAAAA GGGGCT AAAC AGCCCC TTTTTCAATGCATTT TERM 5932 4763990 - 4763975 - R 100 -10.4 -5.54885 | opp_overlap 4763975, overlap 4763968 AACATGAATAAAAAA GGGGCT AAAC AGCCCC TTTTTCAATGCATTT Shewmr7_4008 4765450 - 4764023 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shewmr7_4009 4765542 - 4765892 + | hypothetical protein Shewmr7_4010 4766009 - 4766911 + | naphthoate synthase TERM 5933 4766928 - 4766955 + F 100 -15.8 -5.06103 | opp_overlap 4766934 CGAAGCTGATTGCCA TATAAAGCCCTC ATTT GAGGGCTTTATA TTTTTTAGCGCTTAT TERM 5934 4766949 - 4766934 - f 89 -10.4 -4.04206 | opp_overlap 4766928 TGATTGCCATATAAA GCCCTC ATTT GAGGGC TTTATATTTTTTAGC Shewmr7_4011 4767079 - 4767282 + | hypothetical protein TERM 5935 4767322 - 4767350 + T 100 -14.8 -2.56314 | opp_overlap 4767329, overlap 4767329 CTAATAAAGCCCCAA TAAAAAACCGCC ATTCA GGCGGTTTTTTA TGACTTCCGATTTAT TERM 5936 4767343 - 4767329 - T 100 -8.5 -5.45652 | opp_overlap 4767322 4767329 AGCCCCAATAAAAAA CCGCC ATTCA GGCGG TTTTTTATGACTTCC TERM 5937 4767329 - 4767343 + T 100 -8.5 -5.31456 | opp_overlap 4767329, overlap 4767322 AGCCCCAATAAAAAA CCGCC ATTCA GGCGG TTTTTTATGACTTCC Shewmr7_4012 4769191 - 4767362 - | glutamine--fructose-6-phosphate transaminase Shewmr7_4013 4770037 - 4769267 - | DeoR family transcriptional regulator TERM 5938 4770181 - 4770204 + r 76 -9.6 -3.53811 | opp_overlap 4770181 AAAAGCAATAAAAAA GCAGTTCACC TACC GATGAACTGC TTTAAGGGAGCTAAA TERM 5939 4770204 - 4770181 - R 100 -11.8 -5.61689 | opp_overlap 4770181 AAAAGCAATAAAAAA GCAGTTCACC TACC GATGAACTGC TTTAAGGGAGCTAAA Shewmr7_4014 4772370 - 4770241 - | TonB-dependent siderophore receptor TERM 5940 4771332 - 4771357 + g 87 -8.3 -4.77173 | gap 1, opp_overlap 4771354 AAGCGGTTTTATGTT GCCAGTCG-TCG TAA CGATCGAATGGC TTTATTTTATAACCA TERM 5941 4772612 - 4772585 - R 100 -17.2 -3.35679 | opp_overlap 4772585 4772592, overlap 4772592 TCTTTTTACTTAGAA CATAAAAGCGGC TACT GCCGCTTTTATG TTTGCTCAGAATGAA TERM 5942 4772585 - 4772612 + r 100 -17.2 -3.73775 | opp_overlap 4772585 4772592, overlap 4772592 TCTTTTTACTTAGAA CATAAAAGCGGC TACT GCCGCTTTTATG TTTGCTCAGAATGAA TERM 5943 4772605 - 4772592 - R 100 -9.5 -4.74285 | opp_overlap 4772592 4772585, overlap 4772585 ACTTAGAACATAAAA GCGGC TACT GCCGC TTTTATGTTTGCTCA TERM 5944 4772592 - 4772605 + r 100 -9.5 -4.82128 | opp_overlap 4772585 4772592, overlap 4772585 ACTTAGAACATAAAA GCGGC TACT GCCGC TTTTATGTTTGCTCA Shewmr7_4015 4773996 - 4772632 - | UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase TERM 5945 4774145 - 4774122 - R 100 -11 -5.61689 | opp_overlap 4774122 AAAACCAACAAAAAA GGCGGGTATC TTTC GATAACCGCC TTTTATCACAAACAA TERM 5946 4774122 - 4774145 + r 100 -11 -4.36914 | opp_overlap 4774122 AAAACCAACAAAAAA GGCGGGTATC TTTC GATAACCGCC TTTTATCACAAACAA Shewmr7_4016 4774595 - 4774167 - | F0F1 ATP synthase subunit epsilon TERM 5947 4774607 - 4774638 + r 80 -4.6 -5.16151 | opp_overlap 4774614, overlap 4774611 4774614 CCATCCCGTTCTCCT TAAAAAACTAAGTA TGAC TACTTAGTTATTTC TTTTTGTTAGCTTTC TERM 5948 4774611 - 4774634 + r 78 -5.4 -5.05606 | opp_overlap 4774614, overlap 4774607 4774614 CCCGTTCTCCTTAAA AAACTAAGTA TGAC TACTTAGTTA TTTCTTTTTGTTAGC TERM 5949 4774631 - 4774614 - R 89 -7.1 -5.00616 | opp_overlap 4774611 4774607 4774614 GTTCTCCTTAAAAAA CTAAGTA TGAC TACTTAG TTATTTCTTTTTGTT TERM 5950 4774614 - 4774631 + r 81 -7.1 -4.5815 | opp_overlap 4774614, overlap 4774611 4774607 GTTCTCCTTAAAAAA CTAAGTA TGAC TACTTAG TTATTTCTTTTTGTT Shewmr7_4017 4776023 - 4774632 - | F0F1 ATP synthase subunit beta Shewmr7_4018 4776919 - 4776059 - | F0F1 ATP synthase subunit gamma TERM 5951 4776813 - 4776825 + g 83 -9.1 -4.2828 | GCAGCCATGCGGTCC TGCGC TCT GCGCA TTTTGCTGGCTGCCA TERM 5952 4776942 - 4776961 + r 86 -12.2 -3.01745 | overlap 4776944 CTCCAATCTGGACCT GAGGTGTC TTAA GACACCTC TATCATTGTTACCAG Shewmr7_4019 4778511 - 4776970 - | F0F1 ATP synthase subunit alpha TERM 5953 4778211 - 4778193 - G 74 -12.4 -2.72991 | overlap 4778195 CCAGAGTGTTAACTA CACGGCCT AAT AGGCCGCG ACCGACTGGAACTTC TERM 5954 4778209 - 4778195 - G 73 -11.4 -2.90901 | overlap 4778193 AGAGTGTTAACTACA CGGCCT AAT AGGCCG CGACCGACTGGAACT Shewmr7_4020 4779059 - 4778526 - | F0F1 ATP synthase subunit delta Shewmr7_4021 4779546 - 4779076 - | F0F1 ATP synthase subunit B Shewmr7_4022 4779836 - 4779585 - | F0F1 ATP synthase subunit C Shewmr7_4023 4780701 - 4779907 - | F0F1 ATP synthase subunit A Shewmr7_4024 4781097 - 4780714 - | ATP synthase I chain TERM 5955 4780797 - 4780782 - G 100 -6.8 -5.50774 | CATAACAAACAAAAA GCGGCA TAAA TGCCAC CTCAAGCTTGCTAAA Shewmr7_4025 4782201 - 4781323 - | chromosome segregation DNA-binding protein Shewmr7_4026 4782999 - 4782211 - | chromosome segregation ATPase TERM 5956 4782344 - 4782312 - G 82 -14.1 -2.79915 | overlap 4782328 ATTTATCGTAGTACA TGGCGGGAGCGCCAA AGC TTGGCGCCTCGGCCA AACGCACGTTACGCG gidB 4783694 - 4783074 - | glucose-inhibited division protein B TERM 5957 4783786 - 4783753 - R 84 -11 -3.58037 | opp_overlap 4783760 TATGAAGCCCTGAAA CGTCGAAGGGAAGC CTGAAT GCTTCCCTTCTGCG ACCAAACTGGCGATT TERM 5958 4783760 - 4783779 + r 74 -9.3 -3.28791 | opp_overlap 4783753 CCCTGAAACGTCGAA GGGAAGC CTGAAT GCTTCCC TTCTGCGACCAAACT Shewmr7_4028 4785701 - 4783812 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 5959 4785034 - 4785044 + g 74 -8.2 -4.04719 | opp_overlap 4785033 GACATCACAGGTAAT GGCG TAT CGCC TTTCTGCTCTGTCAT TERM 5960 4786094 - 4786051 - R 72 -9.9 -2.74231 | overlap 4786050 4786048 AGATCTAAATAATAG TTTATCCACAAAAATATAC ATTAAA GTAGCTTTTTGTGGATAAA TAAGATCTAAACTGT Shewmr7_4029 4786582 - 4786142 - | flavodoxin TERM 5961 4788107 - 4788123 + G 80 -10.9 -3.77831 | TTTTTGGACCTTATC GGTTACC GTC GGTAACC TTTGGGTATTGCTGG Shewmr7_4030 4786761 - 4788308 + | amino acid/peptide transporter TERM 5962 4788375 - 4788347 - T 100 -12.6 -5.95539 | gap 1, opp_overlap 4788347 TTCTAAATAAAAAAA TCAGCCC-CTAAG CGAA CTTAGTGGGCTGA TTTTTTTATGAATCG TERM 5963 4788347 - 4788375 + T 100 -12.6 -5.64274 | gap 1, opp_overlap 4788347 TTCTAAATAAAAAAA TCAGCCC-CTAAG CGAA CTTAGTGGGCTGA TTTTTTTATGAATCG trmE 4789775 - 4788414 - | tRNA modification GTPase TrmE TERM 5964 4789840 - 4789812 - R 70 -9.6 -2.84053 | opp_overlap 4789817, overlap 4789817 TCAAATCATCTAAAG GAAAAGGCGGCC AATTA AGCCGCCTTTTT GAATATGCTGAGCCG TERM 5965 4789835 - 4789817 - R 95 -9.5 -4.56914 | opp_overlap 4789817, overlap 4789812 TCATCTAAAGGAAAA GGCGGCC AATTA AGCCGCC TTTTTGAATATGCTG TERM 5966 4789817 - 4789835 + r 100 -8.8 -4.7173 | opp_overlap 4789817 4789812 TCATCTAAAGGAAAA GGCGGC CAATTAA GCCGCC TTTTTGAATATGCTG TERM 5967 4789877 - 4789891 + r 100 -8.6 -5.36441 | CCTATATAGCGCTTG GGCTTA TTT TAAGCC TTTTTTCTCTAGACC Shewmr7_4032 4791505 - 4789880 - | protein translocase subunit yidC TERM 5968 4790054 - 4790067 + g 76 -3.1 -5.08824 | TGGGTCCATGGTCGG TGCGA TGGG TTGCA TTTTTTGCATAACAA Shewmr7_4033 4791763 - 4791509 - | hypothetical protein Shewmr7_4034 4792086 - 4791730 - | ribonuclease P protein component TERM 5969 4792070 - 4792036 - GR 100 -13 -3.76607 | GAATACAGATTTAAA TTGCGCGGGAGTTA GCAAGCG TAACTCCCGCGTAA AGGTATAGCTAGTCA rpmH 4792245 - 4792108 - | 50S ribosomal protein L34