TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.52491 %AT, 4336350 nt, 33619 terms. Intergenic: 0.592193 %AT, H2T: 591630 nt, 5278 terms; T2T: 173145 nt, 3911 terms; H2H: 245098 nt, 3705 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|152998483|ref|NC_009661.1| Shewanella baltica OS185 plasmid pS18501, complete sequence (length 83224) Shew185_4383 14 - 385 + | hypothetical protein Shew185_4384 397 - 1371 + | peptidase C14 caspase catalytic subunit p20 TERM 1 2126 - 2089 - f 100 -14.3 -3.74519 | opp_overlap 2079, overlap 2115 2116 AACAGGTTTATTAAA TGTGCATGCGCGTTT TGCCAAAT AAACGCGCATGCGCA CTATGCAAACGTTAT Shew185_4385 2214 - 2942 + | hypothetical protein TERM 2 3133 - 3158 + T 89 -4.7 -5.53288 | AAACAGACCCATTTC GCCCCGT ATCTTCCTTCCA ACGGGGC TTTTTTTGCCTTAGA Shew185_4386 3816 - 3187 - | resolvase domain-containing protein Shew185_4387 4059 - 4328 + | hypothetical protein Shew185_4389 5477 - 5103 - | hypothetical protein Shew185_4390 6043 - 5474 - | chromosome partitioning ATPase-like protein Shew185_4391 7304 - 6732 - | hypothetical protein TERM 3 6795 - 6812 + g 85 -9.9 -4.33854 | overlap 6787 6791 CAAAAACCAGTCTTG GCTGTTG TTAC CAACAGC TTTAGTTTTATTCAT TERM 4 7118 - 7130 + g 85 -7.7 -4.75063 | opp_overlap 7116 7111 7118 TGTAAAAATCGAAGA GTGTC AAA GACAC TTTTTCAACTTTTCT Shew185_4392 7426 - 8585 + | transposase IS3/IS911 family protein Shew185_4393 10060 - 8558 - | hypothetical protein TERM 5 10176 - 10189 + H 74 -5.2 -4.70453 | opp_overlap 10176 TAGTGAACCAAATAA GGCC CTGATA GGCC TTTTATCTGTTCATT TERM 6 11216 - 11226 + G 73 -5.4 -4.62336 | overlap 11201 GTGAGCAGGTTGCAC CAGT GTC ACTG TTTTTAGAGTCAGAT Shew185_4394 10735 - 11355 + | hypothetical protein Shew185_4395 11448 - 11720 + | hypothetical protein TERM 7 11739 - 11755 + F 86 -9.3 -4.39571 | opp_overlap 11738 11737, overlap 11740 TAAGTCACAAAATTT TGGCGGC TTC GCCGCCC TTTTCCGTTTATGGG TERM 8 11740 - 11754 + F 85 -12.8 -3.23019 | opp_overlap 11738 11737, overlap 11739 AAGTCACAAAATTTT GGCGGC TTC GCCGCC CTTTTCCGTTTATGG Shew185_4396 12047 - 12289 + | bifunctional antitoxin/transcriptional repressor RelB Shew185_4397 12279 - 12563 + | addiction module antitoxin TERM 9 12642 - 12617 - f 100 -7.6 -5.9873 | TTAGGACAAAAAAAA GCCCCGTT GGAAGGAAGA AACGGGGC GAAATGGGTCTGTTT TERM 10 13519 - 13506 - g 74 -3.1 -5.07053 | overlap 13507 AAGCAGTGGAAAAAA CGGTA TGGT TACCA TCGACGTTCAATCTC Shew185_4398 12762 - 13685 + | transposase IS4 family protein Shew185_4399 13889 - 14917 + | transposase IS116/IS110/IS902 family protein Shew185_4400 16318 - 15141 - | transposase IS3/IS911 family protein TERM 11 15354 - 15340 - G 76 -7 -4.4448 | opp_overlap 15340 AAACTTCTAAAGAAA CGCTCC ATT GGTGCG TTATCCCAACAATTC Shew185_4401 17416 - 16377 - | transposase IS3/IS911 family protein Shew185_4403 17989 - 18861 + | integrase catalytic region TERM 12 20407 - 20386 - g 76 -10.9 -3.26366 | overlap 20384 TATATCTAAGCAAGA GGGTAGCTA CAAT CAGCTACCC GACGGTGATTACACT Shew185_4404 18998 - 20953 + | hypothetical protein TERM 13 20987 - 20971 - f 82 -6.5 -4.93877 | opp_overlap 20972, overlap 20972 TTTGATTAAACAAAA GCCTCCA CGT TGGAGGT TTAGTTAGATAACTA TERM 14 20986 - 20972 - f 79 -10 -3.55603 | opp_overlap 20972, overlap 20971 TTGATTAAACAAAAG CCTCCA CGT TGGAGG TTTAGTTAGATAACT TERM 15 20972 - 20986 + F 84 -10 -3.93556 | opp_overlap 20972 20971 TTGATTAAACAAAAG CCTCCA CGT TGGAGG TTTAGTTAGATAACT Shew185_4406 21807 - 22499 + | integrase catalytic region TERM 16 22664 - 22654 - f 74 -4 -5.0925 | CTTTAAAAGGAAAAA TCAT ATC ATGA ACAAAACACGAGTAT Shew185_4407 22661 - 23524 + | hypothetical protein Shew185_4408 23758 - 24366 + | resolvase domain-containing protein Shew185_4409 24427 - 24732 + | hypothetical protein Shew185_4410 25485 - 26087 + | hypothetical protein Shew185_4411 26459 - 26947 + | hypothetical protein TERM 17 27209 - 27192 - f 77 -8.3 -3.80279 | opp_overlap 27189, overlap 27185 27193 TTTATAAAGATAGAA CGCCCCC TTGC GGGGGCT GGCTGTCTAGGAGTT TERM 18 27208 - 27193 - f 81 -11.8 -2.87444 | opp_overlap 27189, overlap 27192 27185 TTATAAAGATAGAAC GCCCCC TTGC GGGGGC TGGCTGTCTAGGAGT Shew185_4413 27821 - 28980 + | transposase IS3/IS911 family protein TERM 19 29129 - 29111 - f 70 -9.6 -2.52933 | opp_overlap 29111, overlap 29110 TTGCAATCGATGAAG CCGACACT TTC AGTGTCGA TGGTGTGGTCATTAA TERM 20 29454 - 29487 + G 85 -10.3 -4.07455 | gap 1, opp_overlap 29452 29457 29461, overlap 29457 29458 TCTTCAAAAATGATG CA-AGTGATCGGGCGC TTT GCGCCCGAACAGTATG TTTATAGTATTGATG TERM 21 29457 - 29483 + G 85 -12.2 -3.37902 | opp_overlap 29452 29457 29461, overlap 29454 29458 TCAAAAATGATGCAA GTGATCGGGCGC TTT GCGCCCGAACAG TATGTTTATAGTATT TERM 22 29483 - 29457 - g 82 -12.2 -3.21225 | opp_overlap 29457 29454 29458, overlap 29452 29461 TCAAAAATGATGCAA GTGATCGGGCGC TTT GCGCCCGAACAG TATGTTTATAGTATT TERM 23 29458 - 29482 + G 95 -15.7 -2.61656 | opp_overlap 29457 29452 29461, overlap 29457 29454 CAAAAATGATGCAAG TGATCGGGCGC TTT GCGCCCGAACA GTATGTTTATAGTAT TERM 24 29479 - 29461 - g 100 -16 -2.56288 | opp_overlap 29458 29457 29454, overlap 29457 29452 AAATGATGCAAGTGA TCGGGCGC TTT GCGCCCGA ACAGTATGTTTATAG TERM 25 30025 - 30009 - g 76 -11.5 -2.83504 | overlap 30008 30006 GCGTTAGCAAAACAT GCCGCCA TTG CGGCGGC TAAGGCGCGTGAACA Shew185_4414 29199 - 30455 + | DNA-repair protein TERM 26 30498 - 30461 - f 71 -9.9 -2.7676 | gap 1, opp_overlap 30451, overlap 30438 30458 TAAAGCGTAACAGGA TTCCGTGACGTTCTGGCC ATC GGCTA-ACCGCCACGGAA ACGCGGCATGAAAAT Shew185_4415 30975 - 31706 + | deoxyribonuclease I Shew185_4416 31721 - 31954 + | hypothetical protein TERM 27 33921 - 33901 - g 75 -3.2 -5.15682 | gap 1, opp_overlap 33901 33913, overlap 33904 33905 AAAAGAGAAAGAAAA GCAGGTGGC TTAC GCCACG-GC TTCCATGTTCGAGGC Shew185_4417 32345 - 34225 + | nuclease Shew185_4418 34350 - 34805 + | hypothetical protein Shew185_4419 34807 - 35295 + | hypothetical protein Shew185_4420 35326 - 35547 + | hypothetical protein TERM 28 35742 - 35708 - f 83 -9.3 -4.07885 | gap 1, opp_overlap 35718 35719 35720, overlap 35718 TAGTTCCCCGCAAAA CGCGAAACAAGCGGCG GCTG CGCCGCCCTTTTC-CG TTTATCTGACAATAC TERM 29 35718 - 35733 + F 81 -11.8 -2.53089 | opp_overlap 35718 35708, overlap 35719 35720 CAAAACGCGAAACAA GCGGCG GCTG CGCCGC CCTTTTCCGTTTATC TERM 30 35733 - 35718 - f 91 -11.8 -4.00411 | opp_overlap 35718 35719 35720, overlap 35708 CAAAACGCGAAACAA GCGGCG GCTG CGCCGC CCTTTTCCGTTTATC TERM 31 35719 - 35735 + F 86 -9.3 -4.41177 | opp_overlap 35718 35708, overlap 35718 35720 AAAACGCGAAACAAG CGGCGGC TGC GCCGCCC TTTTCCGTTTATCTG TERM 32 35720 - 35734 + F 85 -12.8 -3.23622 | opp_overlap 35718 35708, overlap 35718 35719 AAACGCGAAACAAGC GGCGGC TGC GCCGCC CTTTTCCGTTTATCT Shew185_4421 35917 - 36846 + | hypothetical protein Shew185_4422 36848 - 37249 + | hypothetical protein TERM 33 37269 - 37286 + F 95 -11.3 -4.7078 | opp_overlap 37254 CCTGAACGTCTTACA GGGGAAC ATGC GTTCCCC TTTTTCGCTAATTCA TERM 34 37504 - 37518 + F 77 -10 -3.34715 | opp_overlap 37504, overlap 37502 GGGTAGTATGCCAAA TGAGGC TAT GCCTCA TATTTCACCGCAATA TERM 35 37518 - 37504 - f 80 -10 -3.62096 | opp_overlap 37504 37502 GGGTAGTATGCCAAA TGAGGC TAT GCCTCA TATTTCACCGCAATA Shew185_4423 37619 - 37912 + | hypothetical protein Shew185_4424 37893 - 38402 + | hypothetical protein Shew185_4425 38515 - 38742 + | HicB-related protein TERM 36 38835 - 38801 - f 83 -9.3 -4.07885 | gap 1, opp_overlap 38811 38812 38813, overlap 38811 TAGCTCCCCGTAAAA CGCGAAACAAGCGGCG GCTG CGCCGCCCTTTTC-CG TTTATCTGACAATAC TERM 37 38811 - 38826 + F 81 -11.8 -2.53089 | opp_overlap 38801 38811, overlap 38812 38813 TAAAACGCGAAACAA GCGGCG GCTG CGCCGC CCTTTTCCGTTTATC TERM 38 38826 - 38811 - f 91 -11.8 -4.00411 | opp_overlap 38811 38812 38813, overlap 38801 TAAAACGCGAAACAA GCGGCG GCTG CGCCGC CCTTTTCCGTTTATC TERM 39 38812 - 38828 + F 86 -9.3 -4.41177 | opp_overlap 38811 38801, overlap 38811 38813 AAAACGCGAAACAAG CGGCGGC TGC GCCGCCC TTTTCCGTTTATCTG TERM 40 38813 - 38827 + F 85 -12.8 -3.23622 | opp_overlap 38811 38801, overlap 38811 38812 AAACGCGAAACAAGC GGCGGC TGC GCCGCC CTTTTCCGTTTATCT Shew185_4426 39317 - 40315 + | hypothetical protein TERM 41 40323 - 40342 + F 93 -10.8 -4.67982 | CCGCTTGATTTTATA GGCTTAGT TTTC ACTAAGCC TTTTATTAGATAGGA Shew185_4427 40364 - 40663 + | hypothetical protein TERM 42 40700 - 40684 - f 100 -12.3 -4.3739 | opp_overlap 40684 CACGCTTGCAGAAAA CGCACTC ATT GAGTGCG TTTTTTTGGCCTGAA TERM 43 40684 - 40700 + F 100 -12.3 -5.44119 | opp_overlap 40684 CACGCTTGCAGAAAA CGCACTC ATT GAGTGCG TTTTTTTGGCCTGAA TERM 44 41018 - 41003 - f 74 -4.8 -4.71426 | GGTGTATTAATAAAA TAATAC AATC GTATTA AAAGCCCTTGTACCA TERM 45 41131 - 41151 + F 71 -9.9 -2.79023 | overlap 41128 41119 TAGCTCAATTTGTGA GTGTATTAA ACT TTAATACAC TGATTAATACAGTTA Shew185_4428 41221 - 41580 + | hypothetical protein TERM 46 41566 - 41594 + T 70 -9 -3.25919 | opp_overlap 41568 41572, overlap 41568 41572 ATTTTAGCGGGAGAA AATAAAGAGGAC TAAGT GTCCTCTTTATA TATTCATTACATGGT TERM 47 41568 - 41592 + T 82 -11.6 -3.19081 | opp_overlap 41568 41572, overlap 41566 41572 TTTAGCGGGAGAAAA TAAAGAGGAC TAAGT GTCCTCTTTA TATATTCATTACATG TERM 48 41592 - 41568 - T 93 -11.6 -4.38712 | opp_overlap 41566 41568 41572, overlap 41572 TTTAGCGGGAGAAAA TAAAGAGGAC TAAGT GTCCTCTTTA TATATTCATTACATG TERM 49 41588 - 41572 - T 84 -8 -4.77173 | opp_overlap 41572 41568 41566, overlap 41568 GCGGGAGAAAATAAA GAGGAC TAAGT GTCCTC TTTATATATTCATTA TERM 50 41572 - 41588 + T 77 -8 -4.24534 | opp_overlap 41568 41572, overlap 41568 41566 GCGGGAGAAAATAAA GAGGAC TAAGT GTCCTC TTTATATATTCATTA Shew185_4429 47561 - 41601 - | conjugative transfer relaxase protein TraI TERM 51 41863 - 41873 + g 74 -6.8 -4.42062 | TTGACTAATTGCTTT GTCG TTT CGAC TTTGTTTAAGCCGTC TERM 52 42305 - 42320 + g 77 -4.6 -4.83615 | TATTCGCGATTAATG CGGGGA AGGT TCCACG TTTTTCTGACGAATA TERM 53 46917 - 46937 + g 80 -3.9 -5.27938 | ATAAACCCGCTCACC GGTGCCATT GAT GATGCCGCC TTTTTGTTTAAAGCT Shew185_4430 49939 - 47813 - | Type IV conjugative transfer system coupling protein TraD TERM 54 47887 - 47897 + g 83 -4.6 -5.26119 | overlap 47884 CATCCTCAATGTGCT GGTC TGC GGCC TTTTGTTTTTCAGCG TERM 55 49427 - 49442 + g 73 -4.6 -4.69464 | ATCGAGCTTGAAATC GGACTG ACGC CTGTCC TTTTTAAGCTGTTTT TERM 56 49627 - 49613 - G 83 -8.5 -4.48987 | overlap 49607 TGTCCACAACCAAAA GCGGC TGTTG GCCGC AATCAGTATCGGGTT Shew185_4431 50475 - 49942 - | hypothetical protein TERM 57 50323 - 50335 + g 75 -3.3 -5.0916 | opp_overlap 50323 CCAGCTATCAGGCAA TCCCG ATG CGGTA TTTTTGTATTGGGGG Shew185_4432 53323 - 50513 - | TraG domain-containing protein TERM 58 51840 - 51858 + g 75 -5.2 -4.68103 | TTTCCATGAATACGT TCAACGCC TGT GGTGTCGA TTTTATTGCCGTTGG Shew185_4433 54714 - 53326 - | TraH family protein Shew185_4434 55340 - 54897 - | Type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB TERM 59 55151 - 55169 + g 79 -9.6 -3.84451 | CATAGGTATAGGTGC CAGTTTGC GCC GCAAGCTG TTTCAGTTTCGGGGC Shew185_4435 56074 - 55337 - | hypothetical protein TERM 60 56045 - 56060 + g 81 -7.6 -4.60487 | ATTGATGGCTTTGAG CATCAC GTCG GTGATG TTTTTCAGGCTCATG Shew185_4436 56985 - 56110 - | Type-F conjugative transfer system pilin assembly protein TraF Shew185_4437 58796 - 56982 - | conjugal transfer mating pair stabilization protein TraN Shew185_4438 59530 - 58793 - | Type-F conjugative transfer system pilin assembly protein TrbC TERM 61 59495 - 59459 - G 95 -12.5 -4.08692 | opp_overlap 59456 59455 59459, overlap 59463 GAATGGTTGTGAAAA TAGAGAGTTATGCACAA TTT TTGTGCATAACTCGGTA TAGATTGTTGGTAAT TERM 62 59459 - 59495 + g 78 -12.5 -2.67696 | opp_overlap 59459 59463, overlap 59456 59455 GAATGGTTGTGAAAA TAGAGAGTTATGCACAA TTT TTGTGCATAACTCGGTA TAGATTGTTGGTAAT TERM 63 59491 - 59463 - G 100 -17.7 -3.39908 | opp_overlap 59459 59456 59455, overlap 59459 GGTTGTGAAAATAGA GAGTTATGCACAA TTT TTGTGCATAACTC GGTATAGATTGTTGG Shew185_4439 60566 - 59553 - | TraU family protein TERM 64 60477 - 60495 + g 76 -11 -3.23274 | overlap 60474 GTTAACGAACGTGCC CGTACAGG CGG CCTGTGCG TTGGCTTGTGAAGGA Shew185_4440 61257 - 60553 - | Type-F conjugative transfer system protein TraW Shew185_4441 61625 - 61254 - | pilus assembly protein Shew185_4442 64215 - 61627 - | Type-IV secretion system protein TraC TERM 65 61982 - 61964 - G 75 -11.8 -2.65547 | opp_overlap 61967, overlap 61953 61961 61960 AAATCCCCAAAGCCA TCACCTTG GCG CAAGGTGA TATGAATATCTGAAC Shew185_4443 64662 - 64219 - | Type IV conjugative transfer system protein TraV Shew185_4444 66221 - 64695 - | TraB pilus assembly family protein TERM 66 66120 - 66137 + g 79 -2 -5.5074 | overlap 66121 CGTGGCCCCCACCCC TGCAAT CACCCA ATTGCG TTTTTTATTGGCTTC Shew185_4445 67036 - 66218 - | Type-F conjugative transfer system secretin TraK Shew185_4446 67602 - 67036 - | TraE family protein Shew185_4447 67945 - 67643 - | Type IV conjugative transfer system protein TraL Shew185_4448 68320 - 67949 - | hypothetical protein TERM 67 69667 - 69687 + H 100 -6.8 -5.76633 | opp_overlap 69667 CATTCGACAAAAAAA CCGACTTC CCGCA GGGGTCGG TTTTTTTGTGTCTAA TERM 68 69687 - 69667 - H 85 -4 -5.626 | gap 2, opp_overlap 69667 CATTCGACAAAAAAA CCGACTTCCC GCA GGG--GTCGG TTTTTTTGTGTCTAA TERM 69 70332 - 70358 + G 100 -15.3 -3.21126 | opp_overlap 70336 AAGCGTTGGGGTGAA GCGATACCAAG CTCAA CTTGGTATCGC TTCATCGATATGCTT Shew185_4449 69924 - 70655 + | hypothetical protein TERM 70 71226 - 71175 - T 100 -14.2 -3.41359 | gap 1, opp_overlap 71179 71191 71196, overlap 71173 71178 71196 TTTCCAAAAGCAAGA GGAGTTGATCTTACAATAAAATGGT TGA ACCATTTTATTGTAAGATCA-CTTG AATATGAGCGAAGTA TERM 71 71223 - 71178 - T 100 -20.3 -2.85583 | gap 1, opp_overlap 71179 71191 71196, overlap 71175 71173 71196 CCAAAAGCAAGAGGA GTTGATCTTACAATAAAATGGT TGA ACCATTTTATTGTAAGATCA-C TTGAATATGAGCGAA TERM 72 71179 - 71223 + T 100 -20.5 -3.12351 | opp_overlap 71178 71175 71173 71196, overlap 71191 71196 CAAAAGCAAGAGGAG TTGATCTTACAATAAAATGGT TGA ACCATTTTATTGTAAGATCAC TTGAATATGAGCGAA TERM 73 71191 - 71211 + T 75 -9.9 -3.33969 | opp_overlap 71178 71175 71173 71196, overlap 71179 71196 GAGTTGATCTTACAA TAAAATGGT TGA ACCATTTTA TTGTAAGATCACTTG TERM 74 71206 - 71196 - T 75 -5.4 -4.78237 | opp_overlap 71196 71191 71179, overlap 71178 71175 71173 GATCTTACAATAAAA TGGT TGA ACCA TTTTATTGTAAGATC TERM 75 71196 - 71206 + T 75 -5.4 -4.78237 | opp_overlap 71178 71175 71173 71196, overlap 71191 71179 GATCTTACAATAAAA TGGT TGA ACCA TTTTATTGTAAGATC TERM 76 71308 - 71286 - T 86 -10.6 -3.80014 | opp_overlap 71282 71279 71279 71286 AGACCTAGCATTAAA GAGCAGGAAC TTA ATCCCTGCTC TCTATGGTTTATTGT Shew185_4450 71547 - 71317 - | hypothetical protein TERM 77 71494 - 71533 + g 87 -6.6 -5.16071 | gap 1, overlap 71497 71498 TATCCTAAGTTGTGG CACAGGCCAGTGATGAT CTTGACC ATCATCATTGGCC-GTA TTTTTATTCATCATT TERM 78 71497 - 71531 + g 80 -9.4 -4.19587 | overlap 71494 71498 CCTAAGTTGTGGCAC AGGCCAGTGATGAT CTTGACC ATCATCATTGGCCG TATTTTTATTCATCA TERM 79 71498 - 71530 + g 84 -12.9 -3.10668 | overlap 71497 71494 CTAAGTTGTGGCACA GGCCAGTGATGAT CTTGACC ATCATCATTGGCC GTATTTTTATTCATC TERM 80 71651 - 71689 + H 90 -10.6 -4.14764 | opp_overlap 71651 71653 71656 AGGAATTCCATCGAA TATAAGTATACACCTTAA ATA TTAAGGTATACACTTATA TTTAATTATTTGAGG TERM 81 71689 - 71651 - H 100 -15 -3.08173 | opp_overlap 71651, overlap 71653 71656 AGGAATTCCATCGAA TATAAGTATACACCTTAA ATA TTAAGGTATACACTTATA TTTAATTATTTGAGG TERM 82 71687 - 71653 - H 91 -13.2 -3.09803 | opp_overlap 71651, overlap 71651 71656 GAATTCCATCGAATA TAAGTATACACCTTAA ATA TTAAGGTATACACTTA TATTTAATTATTTGA TERM 83 71684 - 71656 - H 80 -10.5 -3.68988 | opp_overlap 71651, overlap 71653 71651 TTCCATCGAATATAA GTATACACCTTAA ATA TTAAGGTATACAC TTATATTTAATTATT Shew185_4451 71713 - 72912 + | cobyrinic acid ac-diamide synthase Shew185_4452 72912 - 74009 + | ParB family protein TERM 84 74131 - 74163 + F 100 -3.6 -6.23545 | opp_overlap 74136, overlap 74134 AATATTGCAGATTTG TAACAGTAGATA ACTCAGAAA TATCTACTGTTC TTTTTTTTATTTGCA TERM 85 74134 - 74160 + F 79 -5.3 -5.11881 | opp_overlap 74136, overlap 74131 ATTGCAGATTTGTAA CAGTAGATA ACTCAGAAA TATCTACTG TTCTTTTTTTTATTT TERM 86 74306 - 74281 - f 70 -9.7 -2.50935 | overlap 74280 AGTGTACCGATTAAT CTGGACTCGGC ATCG GCCAAGCCCAA CAAGCGATTTACGCC TERM 87 74786 - 74776 - g 74 -4 -4.98531 | overlap 74770 CGTTCAAAGCAAAAA CTTT GGC AAAG TATAAGCCACACACT TERM 88 74806 - 74792 - g 74 -10 -3.60151 | TTTGGCAAAGTATAA GCCACA CAC TGTGGC CTCTCGCATTGTTAG Shew185_4453 74373 - 75074 + | FRG domain-containing protein TERM 89 75521 - 75537 + G 83 -6.5 -4.86731 | overlap 75522 GAATTCTCAGGTTCA GCTGCCT CGC AGGCAGA TTTTATTTGGAAAAA TERM 90 75522 - 75536 + G 74 -10 -3.51557 | overlap 75521 AATTCTCAGGTTCAG CTGCCT CGC AGGCAG ATTTTATTTGGAAAA Shew185_4454 75500 - 77527 + | N-6 DNA methylase Shew185_4455 77524 - 78690 + | restriction modification system DNA specificity subunit TERM 91 81212 - 81193 - g 71 -2.8 -4.88217 | gap 1, overlap 81195 ATGAAAAAATGAAAA TG-CTTCGC GAT GCGATGGCA ACGTGGGAGGGGGCT TERM 92 81772 - 81801 + G 73 -10.1 -3.15544 | gap 1, overlap 81780 AAGGTAATTTACCTG GCGCA-GTACAACA AGC TGTTGTTCGTGCGC TTACTAGCCATCAGA Shew185_4456 78687 - 81926 + | type III restriction protein res subunit Shew185_4457 81931 - 83199 + | transposase IS204/IS1001/IS1096/IS1165 family protein SEQUENCE gi|152998555|ref|NC_009665.1| Shewanella baltica OS185, complete genome (length 5229686) Shew185_0001 382 - 1770 + | chromosomal replication initiation protein TERM 1 2187 - 2218 + G 80 -7.4 -4.55287 | gap 1, overlap 2188 TTAGCTTGAAGCAGG GTGTGTTGAAGTCGA TTA TCGACT-CAACGCAA TTTTCTATGGCTAAC TERM 2 2188 - 2217 + G 78 -10.9 -3.3269 | gap 1, overlap 2187 TAGCTTGAAGCAGGG TGTGTTGAAGTCGA TTA TCGACT-CAACGCA ATTTTCTATGGCTAA Shew185_0002 1790 - 2890 + | DNA polymerase III, beta subunit TERM 3 2938 - 2961 + F 91 -13.2 -2.94099 | CTCTGTCTTCGATGT CTATGCCGCT TAAC GGCGGCATAG TGTCTAATACGCAGC TERM 4 3145 - 3169 + G 83 -11.5 -3.6053 | opp_overlap 3150, overlap 3140 CATTCAGTCCGCACA GTTAATCCCTG CAC CTGGGATTAAC TTGATTTATGGCCAA Shew185_0003 3092 - 4174 + | DNA replication and repair protein RecF TERM 5 4839 - 4829 - g 80 -4 -5.19328 | ACGCGACAATAAAAA TGAA TTT TTCA AATACGAAGGCGGTA Shew185_0004 4191 - 6608 + | DNA gyrase, B subunit TERM 6 6667 - 6648 - T 86 -12.2 -3.27774 | opp_overlap 6648 TACGTGAATGATTAA GGGAAAGC CAAG GCTTTCCC TTTTTTATCTCTATG TERM 7 6648 - 6667 + T 100 -12.2 -5.4492 | opp_overlap 6648 TACGTGAATGATTAA GGGAAAGC CAAG GCTTTCCC TTTTTTATCTCTATG Shew185_0005 7356 - 6694 - | glutathione S-transferase domain-containing protein Shew185_0006 8381 - 7461 - | urea amidolyase related protein TERM 8 7513 - 7523 + g 71 -8.2 -3.75024 | overlap 7509 TGCCATTCTGCCTGC GCCG TTG CGGC TTGTTCATCGTCGAC Shew185_0007 8715 - 9755 + | putative signal transduction protein TERM 9 9789 - 9804 + T 100 -10.4 -5.24129 | opp_overlap 9789 CAGGGCAATAAAAAA CGCGCT ATTT AGCGCG TTTTTTATAAAGCGA TERM 10 9804 - 9789 - T 100 -10.4 -5.46657 | opp_overlap 9789 CAGGGCAATAAAAAA CGCGCT ATTT AGCGCG TTTTTTATAAAGCGA Shew185_0008 11912 - 9843 - | glycyl-tRNA synthetase subunit beta Shew185_0009 12828 - 11923 - | glycyl-tRNA synthetase subunit alpha Shew185_0010 12946 - 13548 + | DNA-3-methyladenine glycosylase I TERM 11 13634 - 13665 + T 93 -13.2 -3.27743 | opp_overlap 13639, overlap 13639 AATGCACAAAATGTA AAAAAGCATGTTCC ACGT GGAACATGCTTTTA TCTTCATTGGTGATA TERM 12 13660 - 13639 - T 100 -13.1 -5.28315 | opp_overlap 13634 13639 ACAAAATGTAAAAAA GCATGTTCC ACGT GGAACATGC TTTTATCTTCATTGG TERM 13 13639 - 13660 + T 100 -13.1 -4.73864 | opp_overlap 13639, overlap 13634 ACAAAATGTAAAAAA GCATGTTCC ACGT GGAACATGC TTTTATCTTCATTGG Shew185_0011 16933 - 13745 - | amidohydrolase TERM 14 14908 - 14936 + g 74 -6.7 -4.33754 | overlap 14897 GATTGTCTTTGACTA TGACCACGCCATT GTC GATGACTTGGTCA TTTTCCATTGTAATT TERM 15 17141 - 17119 - R 100 -13.6 -4.0162 | opp_overlap 17119 17124 CTGGCATAGCAGAAA TAGAACCAAG TCA CTTGGTTCTA TTTACTGAGGAGTAT TERM 16 17119 - 17141 + r 95 -13.6 -3.73402 | opp_overlap 17119, overlap 17124 CTGGCATAGCAGAAA TAGAACCAAG TCA CTTGGTTCTA TTTACTGAGGAGTAT TERM 17 17124 - 17136 + r 73 -7.7 -3.86252 | opp_overlap 17119, overlap 17119 ATAGCAGAAATAGAA CCAAG TCA CTTGG TTCTATTTACTGAGG Shew185_0012 17643 - 17197 - | hypothetical protein Shew185_0013 17936 - 17691 - | SirA family protein Shew185_0014 19269 - 18106 - | diguanylate cyclase TERM 18 19488 - 19471 - R 100 -11.3 -5.24531 | opp_overlap 19471 ATTTGGCATAAAAAA GCCGGAA CAAG TTCCGGC TTTGAAATTATTCGA TERM 19 19471 - 19488 + r 88 -11.3 -3.72051 | opp_overlap 19471 ATTTGGCATAAAAAA GCCGGAA CAAG TTCCGGC TTTGAAATTATTCGA Shew185_0015 20675 - 19512 - | 3-ketoacyl-CoA thiolase Shew185_0016 22848 - 20698 - | multifunctional fatty acid oxidation complex subunit alpha TERM 20 23447 - 23461 + G 75 -5.6 -4.69664 | GTGATCCATTCGGGT CAGCCG CAT CGGATG TTTTTGGATGATATC Shew185_0017 23339 - 24661 + | proline dipeptidase TERM 21 24762 - 24737 - g 81 -11.3 -3.67775 | opp_overlap 24737 ATCGTGATTGAAGAA GAGATAAAGCA TAGC CGCTTTATCTC TTTTCTGTTTCATTG TERM 22 24737 - 24762 + G 100 -10.6 -4.84539 | opp_overlap 24737 ATCGTGATTGAAGAA GAGATAAAGC ATAGCC GCTTTATCTC TTTTCTGTTTCATTG Shew185_0018 24689 - 25303 + | hypothetical protein TERM 23 25732 - 25743 + G 75 -5.8 -4.65895 | GGAGCCACAGTGATT GTCG GGCT CGAC TTTTTACCTAAAGCC Shew185_0019 25381 - 26838 + | TrkH family potassium uptake protein Shew185_0020 26841 - 27365 + | protoporphyrinogen oxidase TERM 24 27410 - 27369 - T 84 -8.1 -4.77438 | opp_overlap 27371 27372 27402, overlap 27370 27372 27376 AGCCAGCACTAAAAA CCATTAAGCCCTAATCACT TGCA AGCGATTAGGGCTTAAATT TAAGCTAGCTTTACC TERM 25 27409 - 27370 - T 88 -11.6 -3.4574 | opp_overlap 27371 27372 27402, overlap 27369 27372 27376 GCCAGCACTAAAAAC CATTAAGCCCTAATCACT TGCA AGCGATTAGGGCTTAAAT TTAAGCTAGCTTTAC TERM 26 27371 - 27408 + T 95 -12.9 -3.62864 | opp_overlap 27370 27369 27372 27376, overlap 27372 27402 CCAGCACTAAAAACC ATTAAGCCCTAATCACT TGCA AGCGATTAGGGCTTAAA TTTAAGCTAGCTTTA TERM 27 27372 - 27407 + T 100 -16.4 -2.77236 | opp_overlap 27370 27369 27372 27376, overlap 27371 27402 CAGCACTAAAAACCA TTAAGCCCTAATCACT TGCA AGCGATTAGGGCTTAA ATTTAAGCTAGCTTT TERM 28 27407 - 27372 - T 100 -18.6 -3.29543 | opp_overlap 27372 27371 27402, overlap 27370 27369 27376 CAGCACTAAAAACCA TTAAGCCCTAATCACT TGCA AGCGATTAGGGCTTAA ATTTAAGCTAGCTTT TERM 29 27403 - 27376 - T 100 -15 -3.42182 | opp_overlap 27372 27371 27402, overlap 27372 27370 27369 ACTAAAAACCATTAA GCCCTAATCACT TGCA AGCGATTAGGGC TTAAATTTAAGCTAG Shew185_0021 27737 - 27429 - | regulatory protein ArsR Shew185_0022 27938 - 28489 + | protoporphyrinogen oxidase TERM 30 28513 - 28534 + T 100 -13.1 -4.8048 | opp_overlap 28513 AGGCTTAATAAAAAA GGCGCTTAA CAAG TTAAGCGCC TTTTTAGTATCCAAG TERM 31 28534 - 28513 - T 100 -13.1 -5.45652 | opp_overlap 28513 AGGCTTAATAAAAAA GGCGCTTAA CAAG TTAAGCGCC TTTTTAGTATCCAAG Shew185_0023 30002 - 28560 - | TrkH family potassium uptake protein Shew185_0024 31432 - 30023 - | potassium transporter peripheral membrane component Shew185_0025 32734 - 31448 - | sun protein TERM 32 32658 - 32683 + g 70 -2.5 -4.94902 | gap 1, overlap 32681 TGCTTTTGTTGATCG GGCAATGCCACT GAG AGTGACAC-GCC TTTTTCTAATACTTC Shew185_0026 33692 - 32736 - | methionyl-tRNA formyltransferase TERM 33 33714 - 33730 + r 74 -5 -4.7657 | TCCTATGCTTCTTTG GCGTCC AATCG GGCCGC TTTTTCAAGTTTTTG Shew185_0027 34213 - 33701 - | peptide deformylase TERM 34 34064 - 34084 + g 73 -2.4 -5.14163 | ATGGTAATCCACTTG GGTCGCGG CCAGA CCGATACC TTTTTCTTGGTACAT TERM 35 34672 - 34661 - g 75 -5.8 -4.65916 | CCCATGTGAAGAAAA GTCC TGAA GGAC GGATCATTGCCAAGA Shew185_0028 34339 - 35469 + | peptidoglycan-binding LysM Shew185_0029 35553 - 36569 + | DNA protecting protein DprA Shew185_0030 36572 - 37045 + | hypothetical protein TERM 36 37090 - 37075 - f 71 -6.8 -4.11235 | opp_overlap 37075 GAATTATGAGAGAAA GGAGGC TAAG ACCTCC TTTTTTGATGCCATA TERM 37 37075 - 37090 + F 83 -6.1 -5.15634 | opp_overlap 37075 GAATTATGAGAGAAA GGAGG CTAAGA CCTCC TTTTTTGATGCCATA Shew185_0031 37159 - 37728 + | DNA topoisomerase type IA Zn finger domain-containing protein Shew185_0032 37855 - 38421 + | Sua5/YciO/YrdC/YwlC family protein Shew185_0033 38447 - 39355 + | coproporphyrinogen III oxidase TERM 38 39372 - 39388 + T 78 -7.3 -4.3255 | opp_overlap 39372 CGTTAATCTTAAAAA GTGGATG CCA TATCCAC TTTATTGATTACGCA TERM 39 39388 - 39372 - T 81 -6.6 -4.66833 | opp_overlap 39372 CGTTAATCTTAAAAA GTGGAT GCCAT ATCCAC TTTATTGATTACGCA Shew185_0034 39824 - 39390 - | globin Shew185_0035 39977 - 40825 + | shikimate 5-dehydrogenase Shew185_0036 40831 - 41106 + | hypothetical protein TERM 40 41157 - 41187 + T 100 -15.5 -4.38927 | opp_overlap 41157 CAATAAATAGCAAAA GGCGACAGAGACT GAATG AGTCTCTGCCGCC TTTCTTATATAGCGA TERM 41 41187 - 41157 - T 100 -17.7 -4.55446 | opp_overlap 41157 CAATAAATAGCAAAA GGCGACAGAGACT GAATG AGTCTCTGCCGCC TTTCTTATATAGCGA Shew185_0037 41789 - 41241 - | carbonic anhydrase TERM 42 42057 - 42023 - H 75 -10.1 -3.19192 | TGGCACTTAATTCAA TCGCAGCAAGAAGTT GAAAA AACTCCTTGACGCGA AACGGGAAATGCGTA TERM 43 42081 - 42067 - H 73 -8.6 -3.71917 | ACGCGAAACGGGAAA TGCGTA GAA TACGCA GCCCTAGCCAACTGG TERM 44 44254 - 44284 + H 81 -12 -2.90194 | opp_overlap 44242 44241 44237, overlap 44257 44263 AAGCTGGTCGCAATG CGACTCAGATGAGT GAA ACTCATTTGGGTTG TATGGTTAAGCGACT TERM 45 44257 - 44281 + H 79 -10.1 -3.59946 | opp_overlap 44242 44241 44237, overlap 44254 44263 CTGGTCGCAATGCGA CTCAGATGAGT GAA ACTCATTTGGG TTGTATGGTTAAGCG TERM 46 44772 - 44760 - H 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 47 45568 - 45552 - H 86 -9.4 -4.08546 | overlap 45565 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 48 46085 - 46074 - H 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GCAC TGTG CAAACTCGCAAGAGG TERM 49 47331 - 47320 - H 73 -2.2 -5.18866 | CTCAAACAAAGAAAA TCAG CTTT CCGA ATTATTATTAACGTG TERM 50 47652 - 47617 - H 95 -12 -4.1891 | opp_overlap 47617 47624, overlap 47624 CTCCGCCAACATAAA GATGAAAGCCTCTACA GCAA TGTAGAGGCTTTTTTC GTTATGCAATTTATT TERM 51 47617 - 47652 + H 93 -14.2 -2.64595 | opp_overlap 47617 47624, overlap 47624 CTCCGCCAACATAAA GATGAAAGCCTCTACA GCAA TGTAGAGGCTTTTTTC GTTATGCAATTTATT TERM 52 47645 - 47624 - H 100 -13.1 -4.07089 | opp_overlap 47617 47624, overlap 47617 AACATAAAGATGAAA GCCTCTACA GCAA TGTAGAGGC TTTTTTCGTTATGCA TERM 53 47624 - 47645 + H 100 -13.1 -5.32944 | opp_overlap 47624 47617, overlap 47617 AACATAAAGATGAAA GCCTCTACA GCAA TGTAGAGGC TTTTTTCGTTATGCA Shew185_0038 47947 - 48201 + | hypothetical protein Shew185_0039 48224 - 48679 + | BadM/Rrf2 family transcriptional regulator TERM 54 48672 - 48684 + T 70 -3.4 -4.9792 | TCTCAGTGTTACAGT TGGA TTAGT TCCA TTTTTGTGTGCAATG Shew185_0040 49409 - 48654 - | protein of unknown function DUF610 YibQ Shew185_0041 50627 - 49422 - | carboxyl-terminal protease Shew185_0042 51748 - 50660 - | peptidase M23B TERM 55 51061 - 51048 - G 71 -6.7 -4.25104 | opp_overlap 51047 51048 CTTTGTTTACCAAAA CCTTC CATC GAAGG ATTGTCTTTCATGGC TERM 56 51773 - 51748 - R 95 -14.9 -2.88737 | opp_overlap 51752, overlap 51752 AGAAAGATAACATCA TAAAGCCAGCA AGAA TGCTGGCTTTA ACAAGGAGTCGAGTG TERM 57 51752 - 51769 + r 88 -11.3 -3.53444 | opp_overlap 51748 51752 AGATAACATCATAAA GCCAGCA AGAA TGCTGGC TTTAACAAGGAGTCG TERM 58 51769 - 51752 - R 90 -11.3 -4.09173 | opp_overlap 51752, overlap 51748 AGATAACATCATAAA GCCAGCA AGAA TGCTGGC TTTAACAAGGAGTCG Shew185_0043 53348 - 51804 - | phosphoglyceromutase Shew185_0044 53601 - 54050 + | rhodanese domain-containing protein Shew185_0045 54346 - 54831 + | preprotein translocase subunit SecB Shew185_0046 54836 - 55852 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 59 55886 - 55904 + F 100 -11 -5.28176 | opp_overlap 55886 GCTGAATAAAGGAAA GGGTGCTA AAA TAGCGCCC TTTTTTGTGCCTAAC TERM 60 55904 - 55886 - f 82 -8.8 -4.21141 | opp_overlap 55886 GCTGAATAAAGGAAA GGGTGCTA AAA TAGCGCCC TTTTTTGTGCCTAAC TERM 61 56001 - 55988 - f 70 -8.1 -3.76224 | TCGTGAGTCAGCAAA CTGCC CGTT GGCAG CCAATACCAATCAAC TERM 62 56655 - 56645 - g 75 -5.4 -4.69326 | ACAGTGAAGATAAAA TTCG TTT CGAA CCGTTGTCGGGAATA Shew185_0047 56038 - 57222 + | hypothetical protein Shew185_0048 59305 - 57335 - | putative transcriptional regulator TERM 63 59950 - 59962 + r 79 -4.8 -5.055 | TCGCCAGTTTGGTTT CTGC ATAGC GCAG TTTTTTCACCCTTGG Shew185_0049 61288 - 59927 - | TrkH family potassium uptake protein TERM 64 60976 - 60944 - G 71 -9.1 -3.61398 | GGTTTGCTGCAAGAA GCCAATCTTACCGCC AAG GGCGATAAGGGTGAC AATCGCAAAGGTCAT TERM 65 61079 - 61116 + g 74 -10 -3.53444 | gap 1, opp_overlap 61078 61114, overlap 61080 ATCGACGACCACAAG CCCTGTT-ACTGTCACC GCCGA GGTGACGGTAAACAGGC TTTGCAGCCAAGTAA TERM 66 61080 - 61115 + g 84 -13.5 -2.71924 | gap 1, opp_overlap 61078 61114, overlap 61079 TCGACGACCACAAGC CCTGTT-ACTGTCACC GCCGA GGTGACGGTAAACAGG CTTTGCAGCCAAGTA Shew185_0050 61988 - 61290 - | TrkA domain-containing protein Shew185_0051 62722 - 62033 - | two component transcriptional regulator Shew185_0052 63769 - 62723 - | integral membrane sensor signal transduction histidine kinase TERM 67 63205 - 63215 + g 71 -6.8 -4.28375 | GTTGTAATTTAGTGG CCTG TAA CAGG TTTTCGATATATTGA TERM 68 63930 - 63961 + r 93 -13.1 -3.31144 | opp_overlap 63928 63925 63931, overlap 63931 TGCGAGCTAATAATC AGGCTTACCCCAT AGACTC ATGGGGTAAGCCA TTCTAGGCGTGGGCC TERM 69 63960 - 63931 - R 100 -17.3 -2.94872 | opp_overlap 63931 63930, overlap 63928 63925 GCGAGCTAATAATCA GGCTTACCCCATA GACT CATGGGGTAAGCC ATTCTAGGCGTGGGC TERM 70 63931 - 63960 + r 100 -16.6 -2.58544 | opp_overlap 63928 63925 63931, overlap 63930 GCGAGCTAATAATCA GGCTTACCCCAT AGACTC ATGGGGTAAGCC ATTCTAGGCGTGGGC Shew185_0053 64963 - 64040 - | pirin domain-containing protein TERM 71 64360 - 64350 - G 71 -6.8 -4.18197 | AGGGCGTATTCAAAA CTCG GGT CGAG AGTCAGGGTAAGCTC Shew185_0054 65350 - 67023 + | signal transduction histidine kinase, LytS Shew185_0055 67017 - 67748 + | LytTR family two component transcriptional regulator Shew185_0056 67855 - 69099 + | major facilitator transporter TERM 72 69164 - 69143 - f 100 -11.6 -5.49568 | opp_overlap 69143 AAGCTAAAACAAAAA TCCGCAGC TAAATG GCTGCGGA TTTTTTGCTTTTTTA TERM 73 69143 - 69164 + F 100 -12.3 -5.59502 | opp_overlap 69143 AAGCTAAAACAAAAA TCCGCAGCT AAAT GGCTGCGGA TTTTTTGCTTTTTTA TERM 74 69366 - 69396 + G 76 -8.2 -4.13805 | opp_overlap 69369, overlap 69367 69369 GCCATTAGCCCTACC ACAGCGGCGGCG CTTATGT TGCCGCTGCTGA TTTATATGGATTTTT TERM 75 69367 - 69395 + G 78 -11.7 -3.06656 | opp_overlap 69369, overlap 69366 69369 CCATTAGCCCTACCA CAGCGGCGGCG CTTATGT TGCCGCTGCTG ATTTATATGGATTTT TERM 76 69466 - 69486 + G 70 -2.5 -4.93318 | opp_overlap 69465, overlap 69468 ATTTATGGATATTAC TGCCCGC GGCGATA GTGGGTA TTTTTATCGCTTATC Shew185_0057 69234 - 69971 + | hypothetical protein Shew185_0058 70078 - 70572 + | NLP/P60 protein Shew185_0059 70631 - 72094 + | major facilitator transporter TERM 77 72307 - 72295 - g 73 -5.5 -4.64598 | opp_overlap 72295 72296, overlap 72296 CAATTATCGGAAAAA CGTCG TAA CGACA TTTTAGCTGCCTGCA Shew185_0060 72187 - 73218 + | periplasmic binding protein/LacI transcriptional regulator TERM 78 73243 - 73259 + T 93 -9.4 -4.84527 | opp_overlap 73243 CTTTTAACTAAAAAA GGCGCA ATGAA TGCGCC TTTTTGCTATCTCAA TERM 79 73259 - 73243 - T 100 -9.4 -5.26875 | opp_overlap 73243 CTTTTAACTAAAAAA GGCGCA ATGAA TGCGCC TTTTTGCTATCTCAA Shew185_0061 74811 - 73333 - | sucrose phosphorylase TERM 80 75015 - 74999 - H 81 -7.3 -4.52589 | overlap 75006 CTGCTGTACACAAAA GCCGAAA CCC TTTCAGC AAGCTGTCACTGAGC Shew185_0062 75073 - 76293 + | major facilitator transporter TERM 81 76301 - 76327 + F 100 -15.4 -4.26351 | CGCACTAATTTGGGT TGTGACAGAAAA TAT TTTTCTGTCACA TTTCTTCAATTAATC TERM 82 77364 - 77344 - g 73 -5.4 -4.51378 | ATTTAGACGATAAAA GCATTGGT TACTT ACCTATGC CTATGTACTCGGATG Shew185_0063 76572 - 78968 + | TonB-dependent receptor TERM 83 79022 - 79037 + F 81 -6.8 -4.68593 | opp_overlap 79022 79020 GTTAAGCCCAAAACA GCCCAT GAAA GTGGGC TTTTTGCCTGCTACA Shew185_0064 79088 - 80047 + | ribokinase-like domain-containing protein TERM 84 80071 - 80101 + F 93 -5.4 -5.63645 | GCATTAACGATAACA TCCAAGGCTGGC CTGTTGA GTTTGCCTTGGA TTTTTTGTCTTTTAG Shew185_0065 80302 - 80835 + | molybdenum cofactor biosynthesis protein TERM 85 82837 - 82856 + G 71 -4.9 -4.54047 | overlap 82836 TCAGTTGGGTGAATT GCGTCGT GAAAAG ACGCCGC TTTTCTATCGGGTAG TERM 86 83661 - 83697 + G 71 -10.1 -2.83641 | opp_overlap 83674 83677 GATCCGGTAGAGGTG TGAGCGCTCAAGATCAG GCA CTGGTCTCGAGCGCCGA TATGCTACTGGGTTA Shew185_0066 81044 - 86662 + | alpha-2-macroglobulin domain-containing protein Shew185_0067 86659 - 88947 + | penicillin-binding protein 1C Shew185_0068 89217 - 88966 - | hypothetical protein TERM 87 89249 - 89278 + r 100 -16.6 -3.97636 | TATTGAGGTTTTCAA CTTGGGAACGAC AGGATA GTCGTTCCCAAG TTTGTCGGTTAAAGT Shew185_0069 90464 - 89325 - | transport protein, putative Shew185_0070 91293 - 90559 - | ABC transporter related Shew185_0071 92913 - 91297 - | TAP domain-containing protein Shew185_0072 93007 - 93378 + | regulatory protein GntR HTH Shew185_0073 93432 - 94295 + | ABC transporter related TERM 88 94468 - 94486 + G 73 -5.3 -4.53303 | opp_overlap 94468 94471 GTTGCAGGGCAAAAG CGACAGT GCTGA ACTGTTG TTTTGTATGGGAATC TERM 89 95583 - 95571 - g 73 -5.5 -4.63218 | TTTGGGGCAAGAAAA CCCTC TGG AAGGG AGATGTCATTAGCGG Shew185_0074 94292 - 95602 + | hypothetical protein Shew185_0075 95731 - 97536 + | AMP-dependent synthetase and ligase TERM 90 97552 - 97581 + F 100 -15.9 -4.02424 | opp_overlap 97559, overlap 97559 TTGTTAAGTCATTGT TAAAAAAGGCCGC GGTT GCGGCCTTTTTTG TTTCTGCTACTTCCT TERM 91 97559 - 97574 + F 100 -11.8 -5.73978 | opp_overlap 97559, overlap 97552 GTCATTGTTAAAAAA GGCCGC GGTT GCGGCC TTTTTTGTTTCTGCT TERM 92 97574 - 97559 - f 100 -11.8 -5.03314 | opp_overlap 97552 97559 GTCATTGTTAAAAAA GGCCGC GGTT GCGGCC TTTTTTGTTTCTGCT TERM 93 98938 - 98928 - g 73 -5.4 -4.50943 | GAACAAGGCATAAAA CAAG GGC CTTG GACTGAAAAGATATC Shew185_0076 97680 - 100130 + | MORN repeat-containing protein Shew185_0077 100259 - 100669 + | thioesterase superfamily protein Shew185_0078 100793 - 101341 + | HPP family protein? Shew185_0079 101625 - 101362 - | hypothetical protein Shew185_0080 102140 - 101688 - | thioesterase superfamily protein Shew185_0081 102273 - 102668 + | glutathione-dependent formaldehyde-activating GFA Shew185_0082 102672 - 103028 + | MerR family transcriptional regulator Shew185_0083 103222 - 103608 + | carboxymuconolactone decarboxylase TERM 94 103656 - 103671 + F 73 -6.8 -4.24384 | overlap 103651 TAACACTTCATTGAG GCGATC TTAA GGTCGC TTTGATTTTACTCAT Shew185_0084 103915 - 104997 + | hypothetical protein TERM 95 105009 - 105034 + T 80 -6.1 -4.67353 | opp_overlap 105014, overlap 105014 ATAAGCAGACCCATA AAAAAGCGACC ACAA GGTCGCTTTCA TTTTTGGCTAAATCA TERM 96 105029 - 105014 - T 100 -10.4 -5.29782 | opp_overlap 105014 105009 CAGACCCATAAAAAA GCGACC ACAA GGTCGC TTTCATTTTTGGCTA TERM 97 105014 - 105029 + T 90 -10.4 -4.33653 | opp_overlap 105014, overlap 105009 CAGACCCATAAAAAA GCGACC ACAA GGTCGC TTTCATTTTTGGCTA Shew185_0085 105773 - 105093 - | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase TERM 98 105183 - 105201 + g 76 -8.8 -4.08689 | TTGACAGGTCATCAT GCCTGCAG CTT CTGCAGCC TTTAATTCTTCAATC TERM 99 106361 - 106347 - g 83 -8.6 -4.65895 | TGGGTGAGTTAAAAA GCTTAG CCA CTAAGC AGCAAGAAAATCAGC TERM 100 106605 - 106619 + G 74 -4.2 -4.83615 | opp_overlap 106605 TCGCAGGTATGAAAG GGAAGC CAA GATTCC TTTTTATAAGCACTA Shew185_0086 105935 - 107173 + | hypothetical protein Shew185_0087 107377 - 107811 + | hypothetical protein TERM 101 108312 - 108327 + G 80 -9 -4.2528 | overlap 108305 AACGAGGGCGCCTAA GGTCGA TTTT TCGACC TTTATTGAGTTGGGG Shew185_0088 107908 - 108921 + | hypothetical protein TERM 102 109191 - 109169 - T 78 -10.6 -3.09135 | ACAATCTTCAATATA GCCTGTCGAA GCT TTCTACAGGC TTGAGGCACCATAAC Shew185_0090 111260 - 109437 - | glycerophosphoryl diester phosphodiesterase TERM 103 110177 - 110200 + g 73 -8.2 -3.93136 | opp_overlap 110189 CTGCCCCCGCTCGGT GGGCTGAAAT GAGG ATTTCATCCC TTTGTGGCTCACTGT TERM 104 111324 - 111336 + r 71 -6.3 -4.2349 | AGGTTGGCGGTTAGT CATTG GTG CAATG TTTTAGATATGGGCA Shew185_0091 112096 - 111479 - | FMN-binding negative transcriptional regulator TERM 105 112672 - 112682 + G 71 -8.2 -3.71873 | opp_overlap 112671, overlap 112670 CTTAGGTGAAACAGG CGGC GAT GCCG TTTCCATGTCAATGG TERM 106 112710 - 112724 + G 77 -5 -4.98758 | overlap 112721 TGGATCTAGGTTACT TGATTG GAA CAGTCA TTTTTATGGCTTTTT TERM 107 112721 - 112734 + G 80 -3.1 -5.37865 | overlap 112710 TACTTGATTGGAACA GTCAT TTTT ATGGC TTTTTTCATTCTTGC Shew185_0092 112586 - 113332 + | hypothetical protein TERM 108 113882 - 113848 - f 95 -13.1 -3.49135 | opp_overlap 113846 113845 113858 GACACAATCAACCAA TCTCGATATTGTTGA TACAG TCAACTATATCGAGA GCCTTCTATGCCTTC TERM 109 113966 - 113946 - g 74 -3.9 -4.84359 | opp_overlap 113950, overlap 113950 GCATGCCTACAAAAA GCAATTGCG TAG CGATATTGC TGCACAAGAGATTGA Shew185_0093 113890 - 114450 + | MarR family transcriptional regulator Shew185_0094 114443 - 115195 + | siderophore-interacting protein TERM 110 115273 - 115233 - T 70 -7.7 -3.76968 | opp_overlap 115238, overlap 115236 115238 AACCGAGCTATTAAA CAAGATAAGGTCGCCAAGT TTG ATTTTGCGACCTTATTTTA TTTGCTACTTATGCC TERM 111 115270 - 115236 - T 73 -7.2 -4.015 | opp_overlap 115238, overlap 115233 115238 CGAGCTATTAAACAA GATAAGGTCGCCAAGT TTG ATTTTGCGACCTTATT TTATTTGCTACTTAT TERM 112 115238 - 115268 + T 100 -12 -4.96388 | opp_overlap 115236 115233 115238 AGCTATTAAACAAGA TAAGGTCGCCAAGT TTG ATTTTGCGACCTTA TTTTATTTGCTACTT TERM 113 115268 - 115238 - T 77 -9.8 -3.59653 | opp_overlap 115238, overlap 115236 115233 AGCTATTAAACAAGA TAAGGTCGCCAAGT TTG ATTTTGCGACCTTA TTTTATTTGCTACTT Shew185_0095 116539 - 115313 - | imidazolonepropionase TERM 114 115431 - 115416 - G 73 -2.5 -5.03994 | TCCCACAGACAAAAA TCGGC TTGTTT GCCAA CAACTAAACTGCCGA Shew185_0096 116773 - 117480 + | GntR family transcriptional regulator TERM 115 117478 - 117494 + F 72 -8.7 -3.5944 | opp_overlap 117477 117480, overlap 117481 TTAACTTTTAGCAAG TAGCGCC AGT GGCGTTA TTTACCGATGTAAAT TERM 116 117481 - 117491 + F 73 -8.2 -3.93256 | opp_overlap 117480 117477, overlap 117478 ACTTTTAGCAAGTAG CGCC AGT GGCG TTATTTACCGATGTA TERM 117 117616 - 117565 - f 88 -8.1 -5.02201 | overlap 117568 117570 AAAACACCATAAAAA CAATAGTGTTAACCCGTATTAGC GACTCA GCAAATACGAGTTAGCACCACAG GTTGAAAGAGGAAAA TERM 118 117613 - 117568 - f 91 -10.6 -4.57057 | overlap 117565 117570 ACACCATAAAAACAA TAGTGTTAACCCGTATTAGC GACTCA GCAAATACGAGTTAGCACCA CAGGTTGAAAGAGGA TERM 119 117611 - 117570 - f 86 -11 -3.8772 | overlap 117568 117565 ACCATAAAAACAATA GTGTTAACCCGTATTAGC GACTCA GCAAATACGAGTTAGCAC CACAGGTTGAAAGAG TERM 120 118635 - 118649 + G 81 -10 -4.08485 | ATGGCGTTTGAGATG GGCGTT GAA AACGCC TTTGATTTCCCTGGC TERM 121 119109 - 119066 - g 73 -10.3 -3.10641 | gap 1, opp_overlap 119096, overlap 119068 GAACGCATTACTCAA CACCGCCAGCGGCGCAAC TTGGGTGTC GCTGCACCAC-GGCGGCG GCGTCGGCATGGGCT TERM 122 119276 - 119261 - g 71 -4.6 -4.61231 | overlap 119271 CGAGATTGCGAAAAA CTGCGC CAAA GAGCAG GGGCTCGACTTACCT Shew185_0097 117636 - 119303 + | urocanate hydratase Shew185_0098 119356 - 120897 + | histidine ammonia-lyase TERM 123 121067 - 121027 - f 82 -6.3 -4.87133 | opp_overlap 121036, overlap 121032 121036 ACTGCTGAAATAAAA CAAAACGAAGGCATAAG TGGATTG CTTATGCCTTTTTCTTG AGTGTTTTGCCTTTT TERM 124 121062 - 121032 - f 75 -2.6 -5.34857 | opp_overlap 121036, overlap 121027 121036 TGAAATAAAACAAAA CGAAGGCATAAG TGGATTG CTTATGCCTTTT TCTTGAGTGTTTTGC TERM 125 121058 - 121036 - f 73 -7.8 -3.94607 | opp_overlap 121036, overlap 121032 121027 ATAAAACAAAACGAA GGCATAAG TGGATTG CTTATGCC TTTTTCTTGAGTGTT TERM 126 121036 - 121058 + F 90 -9.2 -5.12971 | opp_overlap 121032 121027 121036 ATAAAACAAAACGAA GGCATAAGTG GAT TGCTTATGCC TTTTTCTTGAGTGTT Shew185_0099 121578 - 124592 + | molybdopterin oxidoreductase Fe4S4 region Shew185_0101 124595 - 125506 + | formate dehydrogenase, beta subunit Shew185_0102 125503 - 126144 + | formate dehydrogenase, gamma subunit TERM 127 126342 - 126363 + G 72 -10.9 -2.52464 | overlap 126345 GCCAAATTGGCGGAG GAGGCTGAC TTCG GTCAGCTTC TCGCTTGGGGGAAAG Shew185_0103 126144 - 127049 + | formate dehydrogenase accessory protein FdhE TERM 128 127070 - 127103 + F 100 -11.7 -4.82901 | opp_overlap 127069 ATAACTTAAGTCAAT GCAGGAGGGAGTCGG GTTG CTGATCCCTTCCTGC TTTTTATCCAACAGA Shew185_0104 127138 - 128568 + | selenocysteine synthase TERM 129 128770 - 128794 + G 72 -10.7 -2.57974 | opp_overlap 128768, overlap 128767 TTATCAACAACATGC TGGTGGGCGTG AGT CATGCTCGCCA TGCCTTACTCGTGCT TERM 130 129280 - 129270 - g 73 -8.2 -3.8917 | TGTCAAGGACAAGAA GCCC AAA GGGC CGTCACGGGGACACG Shew185_0105 128565 - 130610 + | selenocysteine-specific translation elongation factor Shew185_0106 130718 - 131554 + | formate dehydrogenase family accessory protein FdhD TERM 131 131618 - 131634 + F 100 -7.3 -5.69473 | opp_overlap 131621 GTGGCATAAAGGTTA TAAGCGC ATT GTGCTTA TTTTTTTATAGTCTC Shew185_0107 131668 - 132882 + | putative inner membrane protein Shew185_0108 132882 - 133115 + | hypothetical protein TERM 132 133144 - 133178 + T 72 -9.6 -3.05769 | gap 1, opp_overlap 133150, overlap 133150 CTAAGGTGTAAAACT G-AAAAAGGCACAAA ATTATG TTTGTGCCTTTTTAC TATCTCCTTTGGAAA TERM 133 133150 - 133171 + T 90 -8.8 -4.85129 | opp_overlap 133150, overlap 133144 TGTAAAACTGAAAAA GGCACAAA ATTATG TTTGTGCC TTTTTACTATCTCCT TERM 134 133171 - 133150 - T 90 -8.8 -4.87318 | opp_overlap 133150 133144 TGTAAAACTGAAAAA GGCACAAA ATTATG TTTGTGCC TTTTTACTATCTCCT Shew185_0109 134588 - 133254 - | peptidase M48 Ste24p Shew185_0110 135431 - 134796 - | hypothetical protein Shew185_0111 135834 - 136472 + | hypothetical protein Shew185_0112 136491 - 136922 + | glyoxalase/bleomycin resistance protein/dioxygenase Shew185_0113 137921 - 136926 - | hypothetical protein Shew185_0114 138686 - 138060 - | hypothetical protein Shew185_0115 138920 - 139312 + | hypothetical protein Shew185_0116 139917 - 139339 - | hypothetical protein TERM 135 140567 - 140581 + G 79 -2.1 -5.42164 | GTTAAAAGCTTTGTG CAGTT AACTA AGCTG TTTTTATTCTTTGTC Shew185_0117 140126 - 141391 + | MscS mechanosensitive ion channel Shew185_0118 142042 - 141419 - | lysine exporter protein LysE/YggA TERM 136 141674 - 141653 - G 87 -6.7 -5.0133 | gap 1 CAGCGCGGCAAAAAA CAGTAAATCC TTT GGATT-ACTG ATCCCCACCAGAAAC Shew185_0119 142632 - 142069 - | phospholipid/glycerol acyltransferase Shew185_0120 142762 - 143214 + | hypothetical protein Shew185_0121 144091 - 143288 - | hypothetical protein TERM 137 144132 - 144093 - R 84 -12.4 -2.93207 | opp_overlap 144094 144096, overlap 144096 144103 AAGAGTATGCACATA GCAGGCTAAATTAATCCA AAGG TAGATTAACTTAGCCTGT CTGCTCATAAATGAA TERM 138 144094 - 144131 + r 80 -11.5 -2.83164 | opp_overlap 144093 144096 144103, overlap 144096 AGAGTATGCACATAG CAGGCTAAATTAATCCA AAGG TAGATTAACTTAGCCTG TCTGCTCATAAATGA TERM 139 144129 - 144096 - R 83 -12.7 -2.70528 | opp_overlap 144094 144096, overlap 144093 144103 AGTATGCACATAGCA GGCTAAATTAATCCA AAGG TAGATTAACTTAGCC TGTCTGCTCATAAAT Shew185_0122 145832 - 144153 - | hypothetical protein TERM 140 145635 - 145622 - G 71 -4.5 -4.63863 | overlap 145633 GGAATACAAAAACAA CGGCT AACA AACCG CCATGCTGCAGTAGC TERM 141 145907 - 145918 + H 72 -4.4 -4.75309 | TTTTGCGCTGGGGTT TTCG GGGA CGAA TTTTATTCACTTTGG TERM 142 145983 - 145973 - H 70 -5.4 -4.42788 | TCTAAGCCGAGAAAA GGTA CTA TACC CAAGCTACCTGAAGA Shew185_0123 146331 - 146924 + | multiple antibiotic resistance (MarC)-related protein TERM 143 146973 - 146951 - f 100 -15 -4.19735 | opp_overlap 146951 TCGCTTAAAACGAAA CCGCATTAAC GCT GTTAATGCGG TTTTTTTATGGCTGG TERM 144 146951 - 146973 + F 100 -15 -5.64274 | opp_overlap 146951 TCGCTTAAAACGAAA CCGCATTAAC GCT GTTAATGCGG TTTTTTTATGGCTGG Shew185_0124 147241 - 149844 + | peptidase M6 immune inhibitor A TERM 145 149861 - 149900 + T 91 -14 -2.81815 | gap 1, opp_overlap 149872, overlap 149872 TTAATCGCGTGATAG CAGATCAAAAATGCCTCTA ATT TAGAGGCATTTTT-ATTTG TCATTAGTCATTAAA TERM 146 149872 - 149890 + T 100 -11.8 -5.4182 | opp_overlap 149872, overlap 149861 ATAGCAGATCAAAAA TGCCTCTA ATT TAGAGGCA TTTTTATTTGTCATT TERM 147 149890 - 149872 - T 100 -11.8 -4.83269 | opp_overlap 149872 149861 ATAGCAGATCAAAAA TGCCTCTA ATT TAGAGGCA TTTTTATTTGTCATT Shew185_0125 150503 - 149940 - | chorismate lyase Shew185_0126 150619 - 151041 + | flagellar basal body-associated protein FliL-like protein Shew185_0127 151100 - 152197 + | putative SAM-dependent methyltransferase TERM 148 152247 - 152219 - T 100 -21.9 -3.68073 | opp_overlap 152224, overlap 152224 CAGTTTACTTAATAA CAAAACAGGCGCC AAT GGCGCCTGTTTTG ATTAAAGGTAAAAAT TERM 149 152242 - 152224 - T 100 -16 -4.91084 | opp_overlap 152224, overlap 152219 TACTTAATAACAAAA CAGGCGCC AAT GGCGCCTG TTTTGATTAAAGGTA TERM 150 152224 - 152242 + T 100 -16 -4.41494 | opp_overlap 152224 152219 TACTTAATAACAAAA CAGGCGCC AAT GGCGCCTG TTTTGATTAAAGGTA Shew185_0128 152528 - 152271 - | hypothetical protein Shew185_0129 153208 - 152546 - | response regulator receiver protein Shew185_0130 154075 - 153308 - | molybdopterin biosynthesis protein MoeB Shew185_0131 155339 - 154086 - | molybdenum cofactor synthesis domain-containing protein Shew185_0132 155689 - 156225 + | ferroxidase TERM 151 156241 - 156275 + T 100 -12.5 -4.4846 | gap 1, opp_overlap 156251, overlap 156242 156243 156251 ACTTGTTGTATTCGC TA-CAAAAAAAGCAGC CTAG GCTGCTTTTTTTGCTA TTTATTCTTCAATTC TERM 152 156242 - 156273 + T 100 -13.2 -3.83566 | opp_overlap 156251, overlap 156241 156243 156251 CTTGTTGTATTCGCT ACAAAAAAAGCAGC CTAG GCTGCTTTTTTTGC TATTTATTCTTCAAT TERM 153 156243 - 156272 + T 100 -16.7 -2.89055 | opp_overlap 156251, overlap 156242 156241 156251 TTGTTGTATTCGCTA CAAAAAAAGCAGC CTAG GCTGCTTTTTTTG CTATTTATTCTTCAA TERM 154 156264 - 156251 - T 100 -8.1 -5.60993 | opp_overlap 156243 156242 156241 156251 TTCGCTACAAAAAAA GCAGC CTAG GCTGC TTTTTTTGCTATTTA TERM 155 156251 - 156264 + T 100 -8.1 -5.66989 | opp_overlap 156251, overlap 156243 156242 156241 TTCGCTACAAAAAAA GCAGC CTAG GCTGC TTTTTTTGCTATTTA Shew185_0133 159546 - 156322 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 156 157434 - 157408 - G 85 -10.2 -4.15864 | opp_overlap 157407 157404 CAGAATAAGTACAAA TTCATCACCCCC GAT GCGGGTGATAAA GTCGGTTTTACCCGC TERM 157 158364 - 158379 + g 73 -4.7 -4.71061 | overlap 158362 GTTCAATACGCTGGG TGGTG AGCGCC CACCA TTTTTGGCTGTCAAT TERM 158 159609 - 159582 - R 83 -6.4 -5.08824 | opp_overlap 159585, overlap 159586 CGCCTAGCTAAAAAA GAAATTCAACGT CATC ACGTTGAACTTG AGTTGAAAATGGAAC TERM 159 159605 - 159586 - R 93 -9.4 -5.0666 | opp_overlap 159585, overlap 159582 TAGCTAAAAAAGAAA TTCAACGT CATC ACGTTGAA CTTGAGTTGAAAATG TERM 160 159810 - 159827 + r 80 -6.3 -4.68209 | GTGACACAGTATTTT GTCATTC GAAA GAATGGC TTTATTTATTGCCCT TERM 161 159914 - 159946 + r 90 -8.6 -5.1101 | gap 1, opp_overlap 159918, overlap 159918 AAATAAAGCCCAATA AAAAGGACGTTT-GC CGCA GCGAAACGTCCTTTA TTTTTTAGCTAATGA TERM 162 159942 - 159918 - R 93 -9.4 -5.11112 | gap 1, opp_overlap 159918 159914 AAAGCCCAATAAAAA GGACGTTT-GC CGCA GCGAAACGTCC TTTATTTTTTAGCTA TERM 163 159918 - 159942 + r 93 -9.4 -5.0666 | gap 1, opp_overlap 159918, overlap 159914 AAAGCCCAATAAAAA GGACGTTT-GC CGCA GCGAAACGTCC TTTATTTTTTAGCTA Shew185_0134 160642 - 159989 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 164 162482 - 162496 + G 73 -7.1 -4.15044 | opp_overlap 162482 ATATTCGCTAGTGAA TCCCG ATAGA CGGGA TTTATTAAAACAAGA Shew185_0135 161229 - 163364 + | oligopeptidase B Shew185_0136 163376 - 163879 + | excinuclease ABC subunit C Shew185_0137 164188 - 164616 + | hypothetical protein TERM 165 164612 - 164635 + F 70 -9 -3.11366 | overlap 164605 164611 TACAAGTCTGCTATA TCTGATTAGC ATAT GCTAATTAGA CTTGTTTTCCGCTGG TERM 166 165101 - 165090 - g 73 -2.2 -5.06411 | ACAAAAGAAAACAAA CCAA TAAT CTGG CCAGTTACAAATGTG Shew185_0138 164700 - 165188 + | hypothetical protein Shew185_0139 165283 - 165837 + | glycosyl transferase family protein TERM 167 165887 - 165877 - T 70 -5.4 -4.32046 | GGCGCAAAAATTAAA TGAG TTA CTCA CGATTAAAGTTTTTG TERM 168 166247 - 166224 - T 93 -6.8 -5.51402 | opp_overlap 166226 AGAGAGCTAAAAAAA TGCCACTA CAAGGGGT TAGTGGCA TAAATGCATAAGTCG Shew185_0140 167163 - 166381 - | putative lipoprotein TERM 169 166858 - 166870 + g 81 -6.2 -4.83615 | ATCGGCTTTGAGCTT GGCC TTGTT GGCC TTTTTCTCAAGGGTA TERM 170 168213 - 168187 - g 100 -16.7 -3.03124 | opp_overlap 168189 168193, overlap 168189 168193 CGTTATGTGTTAACA CACCAAGGGCA GAATG TGCCCTTGGTG TATAGCATCAGCGCT TERM 171 168189 - 168211 + G 85 -13.5 -2.89564 | opp_overlap 168187 168189 168193, overlap 168193 TTATGTGTTAACACA CCAAGGGCA GAATG TGCCCTTGG TGTATAGCATCAGCG TERM 172 168211 - 168189 - g 86 -13.5 -3.07344 | opp_overlap 168189 168193, overlap 168187 168193 TTATGTGTTAACACA CCAAGGGCA GAATG TGCCCTTGG TGTATAGCATCAGCG Shew185_0141 167476 - 168243 + | methyltransferase type 12 Shew185_0142 170320 - 168269 - | peptidase M14 carboxypeptidase A TERM 173 168562 - 168544 - G 71 -6.6 -4.30576 | opp_overlap 168544 168543 168546 168552, overlap 168546 GCTCCAGCAGTAAAA CCGCCAGA TCG CCCAGCGG TTGATCTGTGCTGAT Shew185_0143 171630 - 170464 - | hypothetical protein TERM 174 170617 - 170634 + g 71 -10.5 -2.81118 | overlap 170605 170616 TCCCTGCGGGACTTC GCCGTCG ATTG CGGCGGC ATTTGAATCGGTTAT TERM 175 171513 - 171500 - G 71 -3.1 -4.87133 | gap 1 ATGCTCCAAATAAAA TGCGGC GGC GCC-CA AATAGCATTAATAGT TERM 176 171894 - 171866 - R 100 -12.6 -5.28778 | opp_overlap 171865 171864 AGTAGGTATAAAAAA GGCTTGAATAAG GGTTG CCTATTCAAGCC GGTATTTGAAGCGTT Shew185_0144 173175 - 171925 - | sodium:dicarboxylate symporter TERM 177 173691 - 173716 + r 100 -16.9 -5.03314 | opp_overlap 173691 GCACGACAATAAAAA GCGCCGACTCA TTGC TGGGTCGGCGC TTTTTTACAAGTAAG TERM 178 173716 - 173691 - R 100 -14.7 -5.22006 | opp_overlap 173691 GCACGACAATAAAAA GCGCCGACTCA TTGC TGGGTCGGCGC TTTTTTACAAGTAAG Shew185_0145 175296 - 173755 - | phosphoenolpyruvate carboxykinase TERM 179 174661 - 174646 - G 70 -2.5 -4.85433 | AGATAAACCGAAAAA TAGCG TAGTGT CGCCA TCTTTACCTACGTTG TERM 180 175440 - 175484 + r 71 -5.1 -4.49344 | gap 1, opp_overlap 175452, overlap 175450 175452 TGAGGGGATTGTGGG GATGAATAAAAATGGGCGCC GAATCG GGCGCCCA-TATTGTTTAGC TTTTATGATCCGTTT TERM 181 175450 - 175475 + r 86 -10.4 -4.0921 | opp_overlap 175452, overlap 175440 175452 GTGGGGATGAATAAA AATGGGCGCC GAATCG GGCGCCCATA TTGTTTAGCTTTTAT TERM 182 175452 - 175473 + r 95 -13 -3.61883 | opp_overlap 175452, overlap 175450 175440 GGGGATGAATAAAAA TGGGCGCC GAATCG GGCGCCCA TATTGTTTAGCTTTT TERM 183 175473 - 175452 - R 100 -13 -5.1356 | opp_overlap 175452 175450 175440 GGGGATGAATAAAAA TGGGCGCC GAATCG GGCGCCCA TATTGTTTAGCTTTT Shew185_0146 176366 - 175506 - | Hsp33-like chaperonin TERM 184 176162 - 176147 - G 74 -6.8 -4.48299 | TCACAGCTAAAGAAA CAGGAC CATT GCCCTG TAACTGCACGCTGAT Shew185_0147 176779 - 176381 - | RNA-binding S4 domain-containing protein Shew185_0148 177033 - 177962 + | general secretion pathway protein C TERM 185 178213 - 178180 - g 71 -7.5 -4.08216 | gap 1 CGATCCGCGGTAAAA TCAACGTTC-GCAGTT ATG ATCTGCTGAACGATGA ACAGTATTACCAGTT TERM 186 179813 - 179795 - g 83 -4.6 -5.20606 | overlap 179796 179797 AAAGACCAAGAAAAA CCTGATGA TCT TCATCAAA CCAACCATTATCCGT Shew185_0149 177987 - 180101 + | general secretion pathway protein D TERM 187 181367 - 181352 - g 74 -6.8 -4.4267 | opp_overlap 181353, overlap 181356 GTCCAAAATGTAAAA TCGAGC ACGT GCCCGA TGCGCGTGAGCGTGA Shew185_0150 180094 - 181659 + | general secretory pathway protein E Shew185_0151 181663 - 182886 + | general secretion pathway protein F Shew185_0152 182950 - 183384 + | general secretion pathway protein G Shew185_0153 183386 - 183961 + | general secretion pathway protein H Shew185_0154 183948 - 184316 + | general secretion pathway protein I Shew185_0155 184297 - 185070 + | general secretion pathway protein J Shew185_0156 185067 - 186065 + | general secretion pathway protein K Shew185_0157 186157 - 187347 + | general secretion pathway protein L TERM 188 187589 - 187577 - g 74 -9.1 -3.77206 | CAGAATGGTACTAAA CCGAC TAT GTCGG GCAGTTTAAGCTCAG Shew185_0158 187349 - 187825 + | general secretion pathway M protein Shew185_0159 187840 - 188601 + | type II secretion system protein N TERM 189 188668 - 188646 - T 74 -6.2 -4.46615 | opp_overlap 188650, overlap 188650 CATTATGAATGAAAA CGAAGGCACC TTA GGTGCCTTTT TTTATTGTATTTTTA TERM 190 188664 - 188650 - T 88 -11.4 -3.76321 | opp_overlap 188650, overlap 188646 ATGAATGAAAACGAA GGCACC TTA GGTGCC TTTTTTTATTGTATT TERM 191 188650 - 188664 + T 100 -11.4 -5.94214 | opp_overlap 188650 188646 ATGAATGAAAACGAA GGCACC TTA GGTGCC TTTTTTTATTGTATT Shew185_0160 189343 - 188681 - | HAD family hydrolase Shew185_0161 189511 - 190110 + | aspartyl/asparaginyl beta-hydroxylase TERM 192 191047 - 191073 + G 85 -5.1 -5.32396 | TTCATGCCTTGCTTT TCGATATGAGC AGGGC GCTCATCCCGA TTTTGTTTTTGATGT Shew185_0162 190088 - 192133 + | phytanoyl-CoA dioxygenase Shew185_0163 192133 - 193293 + | hypothetical protein Shew185_0164 193290 - 193778 + | GCN5-related N-acetyltransferase Shew185_0165 194022 - 194621 + | phage tail collar domain-containing protein TERM 193 194659 - 194677 + F 78 -11 -2.99057 | opp_overlap 194658 194659, overlap 194657 194654 194652 TCTGTAAGTGCAAAT GCGCGCAA GGA TTGTGCGC TACTTGTATTTAAAA Shew185_0166 194716 - 205815 + | putative outer membrane adhesin like proteiin TERM 194 205828 - 205852 + F 79 -11.5 -2.71918 | opp_overlap 205828 205834, overlap 205834 TAAGCGTAAACCAAA CAAAAAGGGGC TTT GCCCCTTTTTA CTATTTATAAGCTAC TERM 195 205852 - 205828 - f 100 -13.7 -4.08317 | opp_overlap 205828 205834, overlap 205834 TAAGCGTAAACCAAA CAAAAAGGGGC TTT GCCCCTTTTTA CTATTTATAAGCTAC TERM 196 205834 - 205846 + F 93 -10.5 -4.96106 | opp_overlap 205828 205834, overlap 205828 TAAACCAAACAAAAA GGGGC TTT GCCCC TTTTTACTATTTATA TERM 197 205846 - 205834 - f 100 -10.5 -5.41941 | opp_overlap 205834 205828, overlap 205828 TAAACCAAACAAAAA GGGGC TTT GCCCC TTTTTACTATTTATA Shew185_0167 206052 - 206633 + | ADP-ribose diphosphatase NudE Shew185_0168 206754 - 207566 + | 3'(2'),5'-bisphosphate nucleotidase Shew185_0169 207574 - 208017 + | GCN5-related N-acetyltransferase TERM 198 208085 - 208107 + F 100 -12.7 -5.57729 | opp_overlap 208082 208078 208085 AACCAAAATAATGGA CGGCGTGCT GACTG AGCGCGCCG TTTTTTATGTTATTT TERM 199 208107 - 208085 - f 73 -10.5 -2.77539 | opp_overlap 208085, overlap 208082 208078 AACCAAAATAATGGA CGGCGTGCT GACTG AGCGCGCCG TTTTTTATGTTATTT Shew185_0170 208316 - 208927 + | TetR family transcriptional regulator TERM 200 209848 - 209861 + G 71 -4.5 -4.62471 | GCTATTCCACCTACG CCAGT GGAT GCTGG TTTTGTCTATGGATT TERM 201 210261 - 210251 - g 82 -5.4 -5.0133 | CAGGCCGTGAAAAAA TTCC AAA GGAA GGGGCTGGCATCATA Shew185_0171 208918 - 210780 + | phospholipid/glycerol acyltransferase TERM 202 210839 - 210807 - T 93 -10.7 -4.95484 | opp_overlap 210808, overlap 210808 CAGTATGAAATAAAA TGATAACCGCGAA GCTAATG TTCGCGGTTATCT TATTTTAGGGTGGCG TERM 203 210808 - 210838 + T 100 -14.2 -4.19746 | opp_overlap 210808 210807 AGTATGAAATAAAAT GATAACCGCGAA GCTAATG TTCGCGGTTATC TTATTTTAGGGTGGC TERM 204 210838 - 210808 - T 100 -14.2 -3.56206 | opp_overlap 210808, overlap 210807 AGTATGAAATAAAAT GATAACCGCGAA GCTAATG TTCGCGGTTATC TTATTTTAGGGTGGC Shew185_0172 211963 - 210857 - | tRNA 2-selenouridine synthase Shew185_0173 213021 - 211963 - | selenide, water dikinase TERM 205 212412 - 212424 + g 91 -4.1 -5.69068 | CCGCAATGTGACTGT CTTCA TCT TGGAG TTTTTTCTGTTTTTG TERM 206 213068 - 213093 + r 95 -14.8 -2.64155 | opp_overlap 213063 213068 213070, overlap 213065 213066 ATCATCATAATCAGA TACGGCCACC ATGCAA GGTGGCCGTA TGACTTTCGGGCAGA TERM 207 213093 - 213068 - R 100 -14.8 -2.9834 | opp_overlap 213068 213065 213066, overlap 213063 213070 ATCATCATAATCAGA TACGGCCACC ATGCAA GGTGGCCGTA TGACTTTCGGGCAGA TERM 208 213091 - 213070 - R 91 -13 -3.04188 | opp_overlap 213068 213065 213066, overlap 213068 213063 CATCATAATCAGATA CGGCCACC ATGCAA GGTGGCCG TATGACTTTCGGGCA Shew185_0174 214223 - 213117 - | stearoyl-CoA 9-desaturase TERM 209 213650 - 213637 - G 71 -6.7 -4.25056 | GAGTTGATGAAGAAA GTGCA GTGA TGCAC CACCACTAAACGCAG Shew185_0175 214368 - 214982 + | DNA-binding transcriptional repressor FabR TERM 210 215003 - 215047 + T 100 -16.7 -4.35044 | opp_overlap 215014, overlap 215004 215014 GTGATATGCACATCA GTTGCTAAAAATAATGGAGCC TGA GGCTCCATTATTTTTTGCGAA TTTATGTTTGAGTAC TERM 211 215004 - 215046 + T 100 -20.2 -3.20303 | opp_overlap 215014, overlap 215003 215014 TGATATGCACATCAG TTGCTAAAAATAATGGAGCC TGA GGCTCCATTATTTTTTGCGA ATTTATGTTTGAGTA TERM 212 215014 - 215036 + T 100 -15 -5.07107 | opp_overlap 215014, overlap 215004 215003 ATCAGTTGCTAAAAA TAATGGAGCC TGA GGCTCCATTA TTTTTTGCGAATTTA TERM 213 215036 - 215014 - T 100 -15 -4.58663 | opp_overlap 215004 215003 215014 ATCAGTTGCTAAAAA TAATGGAGCC TGA GGCTCCATTA TTTTTTGCGAATTTA Shew185_0176 216209 - 215112 - | tRNA (uracil-5-)-methyltransferase Shew185_0177 216452 - 217276 + | glutamate racemase Shew185_0178 217778 - 217314 - | RNP-1 like RNA-binding protein TERM 214 220388 - 220418 + H 90 -8.5 -5.00884 | opp_overlap 220387 ACTATGGATAGAGAT GCCAAAGATAA ACTTAAAAA TTATCTTTGGC TTTTTTAAGCCCGCT TERM 215 220522 - 220499 - H 91 -10.4 -4.58213 | opp_overlap 220499, overlap 220500 TAATTAATTACAAAA CGTTCAATGC GAAA GCATTGAACA TGAGTTCTCAAACAC TERM 216 220521 - 220500 - H 86 -11.7 -3.33843 | opp_overlap 220499, overlap 220499 AATTAATTACAAAAC GTTCAATGC GAAA GCATTGAAC ATGAGTTCTCAAACA TERM 217 220656 - 220686 + H 90 -13.4 -2.90194 | opp_overlap 220644 220643 220639, overlap 220659 220665 AAGCTGGTCGCAATG CGACCCAGGTGAGT GAA ACTCATTTGGGTTG TATGGTTAAGCGACT TERM 218 220659 - 220683 + H 88 -11.5 -3.59946 | opp_overlap 220644 220643 220639, overlap 220656 220665 CTGGTCGCAATGCGA CCCAGGTGAGT GAA ACTCATTTGGG TTGTATGGTTAAGCG TERM 219 221174 - 221162 - H 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 220 221970 - 221954 - H 86 -9.4 -4.08546 | overlap 221967 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 221 222487 - 222476 - H 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GCAC TGTG CAAACTCGCAAGAGG TERM 222 223865 - 223905 + H 82 -12 -3.06265 | opp_overlap 223856 223876, overlap 223876 223899 TAATTATCTCGTAGA GATGTAACGAAGCCAGCT GAATA AGCTGGCTTTTTTGCGTC TGTAATTTGTGAAAT TERM 223 223894 - 223876 - H 77 -10.3 -3.39856 | opp_overlap 223876 223865 TAGAGATGTAACGAA GCCAGCT GAATA AGCTGGC TTTTTTGCGTCTGTA TERM 224 223876 - 223894 + H 93 -10.3 -5.14477 | opp_overlap 223876, overlap 223865 TAGAGATGTAACGAA GCCAGCT GAATA AGCTGGC TTTTTTGCGTCTGTA Shew185_0179 224047 - 225072 + | UDP-N-acetylenolpyruvoylglucosamine reductase Shew185_0180 225065 - 226024 + | biotin--protein ligase Shew185_0181 227002 - 226052 - | pantothenate kinase TERM 225 227299 - 227312 + H 79 -6.7 -4.52589 | CCCGAGTTCGACTCT TGGTG CCGG CACCA TTTTCTGTGGAGGGG TERM 226 227568 - 227552 - H 76 -10.9 -2.62616 | overlap 227554 TCAGTTGGTAGAGCA CACCCTT GGT AAGGGTG AGGTCGGCAGTTCGA TERM 227 227641 - 227665 + H 86 -4.4 -5.46276 | gap 1, overlap 227643 CCTAAACATAATCGG TTCGATGTCAT TTTA ATG-CATCGGA TTTTTTCTATATGTT Shew185_0182 227719 - 228903 + | elongation factor Tu TERM 228 228943 - 228928 - f 83 -9 -4.12456 | opp_overlap 228928 AGATTAGTTTGAAAA GGAAGC TTCG GCTTCC TTTTTTGTTTAAGTG TERM 229 228928 - 228943 + F 100 -9 -5.65927 | opp_overlap 228928 AGATTAGTTTGAAAA GGAAGC TTCG GCTTCC TTTTTTGTTTAAGTG Shew185_0183 229168 - 229539 + | preprotein translocase subunit SecE Shew185_0184 229549 - 230100 + | NusG antitermination factor TERM 230 230133 - 230118 - f 70 -3.2 -5.00136 | opp_overlap 230127 230130, overlap 230119 AAATAAAATACAAAA TCCGTT TGGC AACGGG GGCGAATTTCTATAT TERM 231 230127 - 230163 + F 100 -17.5 -4.07568 | opp_overlap 230119 230118, overlap 230130 ACAAAATCCGTTTGG CAACGGGGGCGAATT TCTATAT AATTCGTCCCCGTTG TTTTCGGGGGAGCAC TERM 232 230130 - 230160 + F 100 -13.4 -4.17048 | opp_overlap 230119 230118, overlap 230127 AAATCCGTTTGGCAA CGGGGGCGAATT TCTATAT AATTCGTCCCCG TTGTTTTCGGGGGAG TERM 233 230288 - 230270 - g 73 -5.2 -4.50661 | overlap 230271 AAGCTACAAGTAAAA TCAGGTTC TGC GAACCCGT CACCACCAGTTGGTC TERM 234 230395 - 230373 - g 80 -2.7 -5.36441 | overlap 230375 CCCGTACAGAAAAAA TGGAAAAAG GCATG CCTATTCCA GTCGTGATCACTGTA Shew185_0185 230228 - 230656 + | 50S ribosomal protein L11 Shew185_0186 230661 - 231362 + | 50S ribosomal protein L1 TERM 235 231368 - 231404 + F 95 -14.6 -2.53015 | opp_overlap 231372, overlap 231372 AACCGTATAATTTTA CAAAGCGCGTGCATTA GTCTA TAATGCGCGCACTTTG TGGGTTGAAGCCTGT TERM 236 231372 - 231400 + F 86 -9.6 -3.97368 | opp_overlap 231372, overlap 231368 GTATAATTTTACAAA GCGCGTGCATTA GTCTA TAATGCGCGCAC TTTGTGGGTTGAAGC TERM 237 231400 - 231372 - f 83 -9.6 -3.9398 | opp_overlap 231372 231368 GTATAATTTTACAAA GCGCGTGCATTA GTCTA TAATGCGCGCAC TTTGTGGGTTGAAGC TERM 238 231608 - 231593 - f 72 -9 -3.39018 | overlap 231591 231601 TTAGTATGGTAAATA CTAGGG AATA CCCTAG GTAGAATCCAGGAGT TERM 239 231773 - 231763 - g 73 -3.2 -5.00616 | GGTCTGCGTAAAAAA GCTC GCG AAGC TGGTGTATATGTACG Shew185_0187 231631 - 232131 + | 50S ribosomal protein L10 Shew185_0188 232186 - 232551 + | 50S ribosomal protein L7/L12 TERM 240 232591 - 232616 + F 100 -13.3 -5.08169 | overlap 232563 232562 AGCCACTTGGGTGGA GGCTGGCGGTT TTTT AACCGTCGGCC TTTTTTGCGCTATAT Shew185_0189 232795 - 236826 + | DNA-directed RNA polymerase, beta subunit TERM 241 236885 - 236860 - f 84 -10.4 -3.81488 | opp_overlap 236859 236858, overlap 236861 GTTTGGCAAACAGAA TGGTGCTCCG TGCGAG CGGAGCACCC GGTTTAACTCCTTCA TERM 242 236884 - 236861 - f 91 -13.9 -2.88571 | opp_overlap 236859 236858, overlap 236860 TTTGGCAAACAGAAT GGTGCTCCG TGCGAG CGGAGCACC CGGTTTAACTCCTTC Shew185_0190 236911 - 241128 + | DNA-directed RNA polymerase subunit beta' TERM 243 241123 - 241107 - f 72 -8.7 -3.55444 | opp_overlap 241096 241094 GGCCGATCTCTTAAA CCTGGCT GGT AGCCAAG ATTAAGTAATCAGTT TERM 244 241164 - 241150 - f 100 -12.8 -4.83169 | opp_overlap 241150 AGTTTGTTATAAAAA GGCGCC TAT GGCGCC TTTTTTCTTGTAATA TERM 245 241150 - 241164 + F 100 -12.8 -5.58179 | opp_overlap 241150 AGTTTGTTATAAAAA GGCGCC TAT GGCGCC TTTTTTCTTGTAATA Shew185_0191 241308 - 241682 + | 30S ribosomal protein S12 Shew185_0192 241764 - 242234 + | 30S ribosomal protein S7 TERM 246 242265 - 242237 - f 84 -12.6 -3.02144 | gap 1, opp_overlap 242237 242240, overlap 242240 TTACCGTTGGTAATA TGATGGTGTGGGC TTAG GCCCACACCAT-A GTTGTTGATATTGCC TERM 247 242237 - 242266 + F 100 -12.9 -3.82084 | opp_overlap 242237 242240, overlap 242240 TTACCGTTGGTAATA TGATGGTGTGGGC TTAG GCCCACACCATAG TTGTTGATATTGCCA TERM 248 242240 - 242263 + F 100 -16.8 -2.98778 | opp_overlap 242237 242240, overlap 242237 CCGTTGGTAATATGA TGGTGTGGGC TTAG GCCCACACCA TAGTTGTTGATATTG TERM 249 242263 - 242240 - f 100 -16.8 -2.73875 | opp_overlap 242240 242237, overlap 242237 CCGTTGGTAATATGA TGGTGTGGGC TTAG GCCCACACCA TAGTTGTTGATATTG TERM 250 243072 - 243062 - g 73 -2.4 -5.02715 | AGACGAAATTAAAAA GGCG CTA CGTC AACGTACTATAAATA TERM 251 243777 - 243756 - g 72 -10.9 -2.57013 | overlap 243752 GTTGAATGTAACGTA GGTAAGCCA CAAG TGGCCTACC GCGAAACTATCCGAG TERM 252 244123 - 244103 - g 73 -5.3 -4.57073 | TATGGGCTTCAAAAA GGGTGCGCT TGA AGCGAATCC GGCGTTGCTCGAACC TERM 253 244330 - 244346 + G 75 -5.9 -4.63928 | CTACACAGGGTCGCG CTTCATA CTC TATGGAG TTTTTGAAGTACTCT Shew185_0193 242313 - 244409 + | elongation factor G Shew185_0194 244482 - 245666 + | elongation factor Tu TERM 254 245691 - 245706 + F 100 -9 -5.79595 | opp_overlap 245691 AGATTAGTTTGAAAA GGAAGC TTCG GCTTCC TTTTTTGTTTTAAGG TERM 255 245706 - 245691 - f 83 -9 -4.12456 | opp_overlap 245691 AGATTAGTTTGAAAA GGAAGC TTCG GCTTCC TTTTTTGTTTTAAGG TERM 256 245929 - 245968 + F 76 -2.3 -5.4251 | gap 2, opp_overlap 245929, overlap 245932 CGAACGGTTAAATCA TCTCGCTCT-GCTT-TTCT ATAT AGAAGAAGCTAGAGGGTGA TTTTTTATATGTCCA Shew185_0195 246002 - 246313 + | 30S ribosomal protein S10 Shew185_0196 246344 - 246982 + | 50S ribosomal protein L3 Shew185_0197 247000 - 247605 + | 50S ribosomal protein L4 Shew185_0198 247602 - 247907 + | 50S ribosomal protein L23 Shew185_0199 247924 - 248748 + | 50S ribosomal protein L2 Shew185_0200 248763 - 249041 + | 30S ribosomal protein S19 Shew185_0201 249057 - 249389 + | 50S ribosomal protein L22 TERM 257 249498 - 249477 - g 73 -8.1 -4.0641 | TGGTACGCAGATAAA TCAGATTAC GCAA GTAACCTGA ACAGCGACTGGGAAG Shew185_0202 249399 - 250091 + | 30S ribosomal protein S3 TERM 258 250170 - 250191 + G 85 -9.5 -4.34402 | GCGGTCTAGCGAACG GTACCGAAG TTAG CTTTGGTAC TTTTGGTCTGAAAGC Shew185_0203 250103 - 250513 + | 50S ribosomal protein L16 TERM 259 250559 - 250541 - g 83 -3.8 -5.38951 | AACTGAGAGAAAAAA GCGTTGAA GAA CTGAACGC TGAACTACTTGGTCT Shew185_0204 250513 - 250704 + | 50S ribosomal protein L29 TERM 260 250764 - 250753 - g 71 -4.4 -4.75219 | opp_overlap 250753, overlap 250744 TAACTAGCAACAAAA TGGA CAAG TCCA TTACTGTTGCTATCG Shew185_0205 250704 - 250952 + | ribosomal protein S17 TERM 261 250971 - 250999 + F 100 -11.8 -5.20216 | opp_overlap 250975 AATTAGGTATTTAGG TAAACGGCTCCA GAATG TGGGGCCGTTTG TTTTTTAATACTATA TERM 262 250995 - 250975 - f 70 -8.2 -3.66999 | opp_overlap 250971 AGGTATTTAGGTAAA CGGCTCCA GAATG TGGGGCCG TTTGTTTTTTAATAC Shew185_0206 251133 - 251501 + | 50S ribosomal protein L14 TERM 263 251676 - 251653 - g 73 -5.2 -4.64361 | overlap 251659 CAAAAAACACCAAAA GCCAAACCCA CAAT TGGGCGTAGC TGGCGGTATTGTTGA TERM 264 251809 - 251789 - g 80 -4.7 -5.09173 | GAAGACGGCAAAAAA GTTCGTTTC TTC AAATCGAAC AGTGAACTCGTTAAG Shew185_0207 251513 - 251827 + | 50S ribosomal protein L24 TERM 265 252006 - 251985 - g 74 -4.4 -4.84311 | opp_overlap 251988, overlap 251986 TTGCAGACAAGAAAA TCATGGAC CATGCT GTCCGTGA TATGACTGCAATCGC Shew185_0208 251840 - 252379 + | 50S ribosomal protein L5 Shew185_0209 252390 - 252695 + | 30S ribosomal protein S14 Shew185_0210 252720 - 253112 + | 30S ribosomal protein S8 Shew185_0211 253123 - 253656 + | 50S ribosomal protein L6 Shew185_0212 253667 - 254017 + | 50S ribosomal protein L18 Shew185_0213 254029 - 254532 + | 30S ribosomal protein S5 Shew185_0214 254539 - 254721 + | 50S ribosomal protein L30 Shew185_0215 254725 - 255159 + | 50S ribosomal protein L15 TERM 266 256499 - 256477 - g 70 -7.8 -3.79668 | opp_overlap 256463 256481, overlap 256463 256481 AGCTAACCTAGTAAA CAAAGCGA ATTTAGA TCGCTTTG GTCGCTAAGTAGCTT Shew185_0216 255167 - 256507 + | preprotein translocase subunit SecY Shew185_0217 256529 - 256642 + | 50S ribosomal protein L36 TERM 267 256684 - 256646 - f 83 -7.5 -4.66833 | opp_overlap 256649 256650, overlap 256650 CGTCAAGGCTAAAAA GTAATTTGTTCAGCCCA TGAAT TGGGCTGAACAAAATTT AGTTTGCAAATCTGT TERM 268 256649 - 256681 + F 100 -13.6 -4.06502 | opp_overlap 256646 256650, overlap 256650 CAAGGCTAAAAAGTA ATTTGTTCAGCCCA TGAAT TGGGCTGAACAAAA TTTAGTTTGCAAATC TERM 269 256650 - 256680 + F 100 -17.1 -3.03419 | opp_overlap 256646 256650, overlap 256649 AAGGCTAAAAAGTAA TTTGTTCAGCCCA TGAAT TGGGCTGAACAAA ATTTAGTTTGCAAAT TERM 270 256680 - 256650 - f 100 -17.1 -3.82528 | opp_overlap 256650 256649, overlap 256646 AAGGCTAAAAAGTAA TTTGTTCAGCCCA TGAAT TGGGCTGAACAAA ATTTAGTTTGCAAAT Shew185_0218 256760 - 257116 + | 30S ribosomal protein S13 Shew185_0219 257132 - 257524 + | 30S ribosomal protein S11 Shew185_0220 257557 - 258177 + | 30S ribosomal protein S4 TERM 271 258210 - 258222 + G 71 -6.3 -4.15222 | GGACACAATGCAGGG TTCTG TTA CAGAA TTTCTTAAACCGCGT Shew185_0221 258202 - 259191 + | DNA-directed RNA polymerase subunit alpha Shew185_0222 259232 - 259627 + | 50S ribosomal protein L17 TERM 272 259638 - 259677 + T 81 -2.8 -5.66868 | opp_overlap 259649, overlap 259642 259649 AGTAATTAAGGTTAC ACTTTTAAAAAGCCGGGC GAAT GCTCGGCTTTTTTATATC TTTTTTTCGTTACTT TERM 273 259642 - 259673 + T 93 -12.4 -3.80651 | opp_overlap 259649, overlap 259638 259649 ATTAAGGTTACACTT TTAAAAAGCCGGGC GAAT GCTCGGCTTTTTTA TATCTTTTTTTCGTT TERM 274 259666 - 259649 - T 87 -8.3 -4.61231 | opp_overlap 259642 259638 259649 TTACACTTTTAAAAA GCCGGGC GAAT GCTCGGC TTTTTTATATCTTTT TERM 275 259649 - 259666 + T 100 -10.5 -5.53079 | opp_overlap 259649, overlap 259642 259638 TTACACTTTTAAAAA GCCGGGC GAAT GCTCGGC TTTTTTATATCTTTT Shew185_0223 260694 - 259687 - | hypothetical protein TERM 276 260793 - 260767 - R 89 -4.5 -5.60689 | gap 1, opp_overlap 260767 TGAGATAATAAAAAA GCCTCACTAG TTATTAGG CTAG-GAGGC TTATTGTGTATGCTG Shew185_0224 261316 - 260828 - | cytochrome c-type biogenesis protein CcmE TERM 277 261256 - 261244 - G 71 -4.8 -4.61873 | GCGCATAAAGCAAAA GCGA AGTAA TCGC GGCAACACCACCGAT Shew185_0225 261513 - 261313 - | Heme exporter protein D (CcmD) Shew185_0226 262259 - 261513 - | heme exporter protein CcmC TERM 278 261665 - 261677 + g 70 -7.7 -3.93695 | GATAGAGCATTTCCG TCGAC ATA GTCGA TTTCTCGGTAATGCG Shew185_0227 262947 - 262261 - | heme exporter protein CcmB Shew185_0228 263609 - 262959 - | cytochrome c biogenesis protein CcmA TERM 279 263023 - 263052 + g 75 -10.1 -3.31792 | gap 1 ATAATGCCCATATCT TGGTGAGTTGTGAG GAT CACACAAC-CACCA TTATCCGCATGCTGA Shew185_0229 263928 - 264227 + | cytochrome c class I TERM 280 264243 - 264271 + T 71 -9.8 -2.89683 | gap 1, opp_overlap 264250, overlap 264250 TTTTTTCAGTGTTAA TAAAAAA-CCGGC CAAA GCCGGTTTTTTTA TGTCTGCAATAAACT TERM 281 264263 - 264250 - T 100 -9.5 -5.45652 | opp_overlap 264243 264250 AGTGTTAATAAAAAA CCGGC CAAA GCCGG TTTTTTTATGTCTGC TERM 282 264250 - 264263 + T 100 -9.5 -5.76633 | opp_overlap 264250, overlap 264243 AGTGTTAATAAAAAA CCGGC CAAA GCCGG TTTTTTTATGTCTGC Shew185_0230 265544 - 264291 - | tetratricopeptide domain-containing protein Shew185_0231 265945 - 267924 + | cytochrome c-type biogenesis protein CcmF Shew185_0232 267936 - 268490 + | periplasmic protein thiol--disulphide oxidoreductase DsbE Shew185_0233 268487 - 268966 + | cytochrome C biogenesis protein TERM 283 269140 - 269160 + G 79 -11.9 -3.11732 | opp_overlap 269139 269156, overlap 269131 GTCGCCTTTAATGAC GTCGATGGT AAA GCCATCGAC TTCAGTCAATTTAAA Shew185_0234 268963 - 269550 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 284 269590 - 269604 + F 100 -10 -5.26875 | opp_overlap 269590 CACCATCGTTTAAAA GATCGC CAT GCGATC TTTTTTCATTAAAAA TERM 285 269604 - 269590 - f 86 -10 -4.10161 | opp_overlap 269590 CACCATCGTTTAAAA GATCGC CAT GCGATC TTTTTTCATTAAAAA TERM 286 269786 - 269772 - f 73 -8.6 -3.71917 | ACGCGAAACGGGAAA TGCGTA GAA TACGCA GCCCTAGCCATCTGG TERM 287 272478 - 272466 - f 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 288 273274 - 273258 - f 86 -9.4 -4.08546 | overlap 273271 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 289 273791 - 273780 - f 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GCAC TGTG CAAACTCGCAAGAGG TERM 290 274980 - 274969 - f 80 -2.2 -5.53288 | GCGAACTCAAAAAAA TCAG CTTT CCGA ATTATTATTAACGTG TERM 291 275271 - 275292 + F 100 -13.1 -4.84527 | opp_overlap 275271 CCAACATTTCGATAA GCCCTAACA GCAA TGTTAGGGC TTTTTCGTATCTGGA TERM 292 275292 - 275271 - f 93 -13.1 -3.33315 | opp_overlap 275271 CCAACATTTCGATAA GCCCTAACA GCAA TGTTAGGGC TTTTTCGTATCTGGA TERM 293 275441 - 275462 + F 100 -13.1 -4.78149 | opp_overlap 275441 ATCATAAAGATGAAA GCCTCTACA GCAA TGTAGAGGC TTTTTCCGTTGTGGA TERM 294 275462 - 275441 - f 100 -13.1 -4.05181 | opp_overlap 275441 ATCATAAAGATGAAA GCCTCTACA GCAA TGTAGAGGC TTTTTCCGTTGTGGA Shew185_0235 275771 - 276283 + | hypothetical protein TERM 295 276300 - 276335 + F 77 -9.7 -3.57263 | TCTAGGCTAGATGTA GTACTGTTGCGCAGC CTAATT GTTGCGCAGCAGCGC TTTGCCGCTCGAGCT Shew185_0236 276695 - 276892 + | hypothetical protein TERM 296 276953 - 276976 + T 79 -11 -3.21126 | overlap 276970 TAGCCAGCATGTACA GCTTCACGAC GCAC GTCGTGGGGC TTGCTCACTCTCCTT Shew185_0237 277465 - 276998 - | GCN5-related N-acetyltransferase Shew185_0238 278913 - 277597 - | integral membrane sensor signal transduction histidine kinase Shew185_0239 279578 - 278919 - | two component transcriptional regulator TERM 297 279358 - 279371 + g 70 -2.3 -4.8543 | GTGAGGATCAGCACT GGCAT GGCT AAGCC TTTTTGTCGCCATTG Shew185_0240 279844 - 279578 - | peptidase Shew185_0241 280400 - 279837 - | diheme cytochrome c Shew185_0242 280931 - 280491 - | hypothetical protein Shew185_0243 281572 - 280985 - | cytochrome B561 Shew185_0244 281792 - 282256 + | hypothetical protein Shew185_0245 282324 - 282836 + | hypothetical protein Shew185_0246 283745 - 282822 - | LysR family transcriptional regulator TERM 298 284224 - 284206 - g 71 -10.4 -2.91144 | opp_overlap 284205, overlap 284203 CTATGGCGGAAACCA GTATCGAA CAG TTCGATAC CTTGATGAACATCCA Shew185_0247 283884 - 284645 + | short-chain dehydrogenase/reductase SDR TERM 299 284693 - 284719 + T 100 -13.8 -4.23207 | opp_overlap 284696 284700, overlap 284696 284700 ATATGAGGCAGAAAC AAAGAAAGGGCG AAT CGCCCTTTCTTA TTTATGTGATTTTTA TERM 300 284716 - 284696 - T 100 -15.5 -4.57482 | opp_overlap 284693 284696 284700, overlap 284700 TGAGGCAGAAACAAA GAAAGGGCG AAT CGCCCTTTC TTATTTATGTGATTT TERM 301 284696 - 284716 + T 100 -15.5 -4.19324 | opp_overlap 284696 284700, overlap 284693 284700 TGAGGCAGAAACAAA GAAAGGGCG AAT CGCCCTTTC TTATTTATGTGATTT TERM 302 284712 - 284700 - T 93 -10.5 -4.83246 | opp_overlap 284696 284693 284700, overlap 284696 GCAGAAACAAAGAAA GGGCG AAT CGCCC TTTCTTATTTATGTG TERM 303 284700 - 284712 + T 91 -10.5 -4.65458 | opp_overlap 284700 284696, overlap 284696 284693 GCAGAAACAAAGAAA GGGCG AAT CGCCC TTTCTTATTTATGTG Shew185_0248 286385 - 284865 - | aldehyde dehydrogenase TERM 304 284898 - 284916 + g 90 -10.4 -4.33105 | opp_overlap 284900 ATTCACATCGTAACT TACCAAGA GAT TCTTGGTA TTTTGATAATGGTTG TERM 305 286310 - 286331 + g 76 -2.3 -5.29846 | gap 1, overlap 286313 CTGGGGCGACCCATT TACCGCCGAT GAA GTTGGCG-TA TTTTTCTTTGAAGTT TERM 306 286313 - 286329 + g 71 -6.5 -4.27026 | overlap 286310 GGGCGACCCATTTAC CGCCGAT GAA GTTGGCG TATTTTTCTTTGAAG TERM 307 287669 - 287645 - g 90 -9.1 -4.57569 | overlap 287628 GCAGTTTGTTAAAAA GCTCCACGCCC AGA GTGCGCGGCGC AGCGAGCCCTTAGTG Shew185_0249 286647 - 288527 + | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 308 289249 - 289266 + G 71 -8.5 -3.69841 | overlap 289246 GTAACTGGGACTTAG TGGGTAA TAAC TTACCCA TATTCTTTATTCGCG Shew185_0250 288810 - 290330 + | catalase Shew185_0251 290500 - 291006 + | ankyrin TERM 309 290996 - 291014 + F 76 -4.5 -5.10077 | TGCAGCAGGCGAGTT TGAAGCC ATAAA GGCATCA TTTTTTGCCATCTTT Shew185_0252 291184 - 292164 + | quinone oxidoreductase putative YhdH/YhfP TERM 310 292214 - 292187 - T 100 -12.8 -4.16943 | overlap 292188 292190 TCTTATACTTTAAAA TGATGGCAACAC TGAG GTGTTGCCATCT ACGACTATGCCATCC TERM 311 292213 - 292188 - T 100 -16.3 -3.09844 | overlap 292187 292190 CTTATACTTTAAAAT GATGGCAACAC TGAG GTGTTGCCATC TACGACTATGCCATC TERM 312 292211 - 292190 - T 91 -13.1 -3.10545 | overlap 292188 292187 TATACTTTAAAATGA TGGCAACAC TGAG GTGTTGCCA TCTACGACTATGCCA Shew185_0253 293637 - 292261 - | integral membrane sensor signal transduction histidine kinase Shew185_0254 294311 - 293625 - | two component transcriptional regulator Shew185_0255 294692 - 295216 + | protein of unknown function Spy-related TERM 313 295296 - 295340 + G 100 -13 -4.02817 | gap 1, opp_overlap 295304 295305 CCCAATACGATTTTT GGGTCAAACTGGCTAGCCGCG CTTC CGTGGCTA-CCGCTTTGATCC TTATTCTTATCAAGC TERM 314 295614 - 295631 + G 73 -7.7 -4.08706 | opp_overlap 295613 TTCCGGTTGAAAATG CCACCAT AGGT GTGGTGG TTTCTGTCATAGCGA Shew185_0256 295268 - 296140 + | cation diffusion facilitator family transporter TERM 315 296188 - 296175 - f 71 -6.7 -4.02022 | TTCAAGGATGATAAA GCGAT ATTA ATCGC TTAGGAGTAGGGATA Shew185_0257 296203 - 296613 + | hypothetical protein TERM 316 296648 - 296628 - T 95 -15.5 -2.62735 | opp_overlap 296631 ATATGTTTGATACTA GGAGTTGCC AAA GGCAACTCC ATTACGCTAGTTTAC TERM 317 296631 - 296645 + T 72 -10 -2.54371 | opp_overlap 296628 TGTTTGATACTAGGA GTTGCC AAA GGCAAC TCCATTACGCTAGTT Shew185_0258 298072 - 296660 - | nitrogen metabolism transcriptional regulator, NtrC, Fis family Shew185_0259 299157 - 298111 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 318 299198 - 299177 - R 70 -9.5 -2.70946 | gap 1, opp_overlap 299176, overlap 299176 CGTTCCTAGAAATAG GGTTGCACCA CCA TGGTGC-ACC AATCTGGTGCAAGCT Shew185_0260 299817 - 299311 - | hypothetical protein TERM 319 299391 - 299422 + g 75 -5.1 -4.81249 | opp_overlap 299367 299365 299401, overlap 299394 TTTGAGTCAAAGCGT CAACGACTAAGGT ATGCTC ACCTCGGTCGATG TTTTTGAGTTTGAAG TERM 320 299968 - 300003 + r 72 -9 -3.41878 | opp_overlap 299968 299973 ACTGGGTTGAACGAA CTGAAGTTCGGGCACA CTCA TGTACCCGAACTCGAG TTGTAAATTACACGC TERM 321 300003 - 299968 - R 93 -13.4 -3.33815 | opp_overlap 299968, overlap 299973 ACTGGGTTGAACGAA CTGAAGTTCGGGCACA CTCA TGTACCCGAACTCGAG TTGTAAATTACACGC TERM 322 299998 - 299973 - R 95 -14.1 -3.23899 | opp_overlap 299968, overlap 299968 GTTGAACGAACTGAA GTTCGGGCACA CTCA TGTACCCGAAC TCGAGTTGTAAATTA Shew185_0261 300637 - 300011 - | glutathione S-transferase domain-containing protein TERM 323 300670 - 300700 + r 100 -21.4 -3.88583 | opp_overlap 300666, overlap 300690 GTGAGAGTACATTTT TAGCTATCGCACCA TTA TGGTGCGATAGCTA TTTCTACCGCATTTA Shew185_0262 301465 - 300773 - | ThiJ/PfpI domain-containing protein Shew185_0263 302694 - 301537 - | iron-containing alcohol dehydrogenase Shew185_0264 303474 - 302878 - | TetR family transcriptional regulator Shew185_0265 304073 - 303762 - | hypothetical protein Shew185_0266 304432 - 306387 + | methyl-accepting chemotaxis sensory transducer TERM 324 306457 - 306486 + T 100 -13.7 -5.08088 | opp_overlap 306440 306459, overlap 306459 GAGCTGGATGTTACA CATCCGCCAGAAA TGGA TTTCTGGCGGATA TTTTTATTGAGACTT TERM 325 306459 - 306484 + T 100 -16.3 -4.16307 | opp_overlap 306440 306459, overlap 306457 GCTGGATGTTACACA TCCGCCAGAAA TGGA TTTCTGGCGGA TATTTTTATTGAGAC TERM 326 306484 - 306459 - T 100 -16.3 -2.89564 | opp_overlap 306459 306457, overlap 306440 GCTGGATGTTACACA TCCGCCAGAAA TGGA TTTCTGGCGGA TATTTTTATTGAGAC Shew185_0267 308641 - 306527 - | hypothetical protein TERM 327 306769 - 306754 - G 70 -7.6 -3.81414 | opp_overlap 306753 ACGGCGAAGTAATAA CAAGGT ATCC ACCTTG ATTAATCCGCTGGGC TERM 328 309168 - 309181 + G 74 -3.1 -5.03314 | CATCGGAACGAGAAT TAGCA ACTG TGCTG TTTTTTGCCGCTAAA TERM 329 309840 - 309860 + G 78 -6.1 -4.79223 | overlap 309836 ATATTCAAGTGCATC CTAAGGCTG GTT CTGTCTTAG TTTTTGATAATGTAG TERM 330 309956 - 309973 + G 73 -7.1 -4.29176 | opp_overlap 309956 309967 TGGATATGTACACAA TGGTTTA GAGA TAAACCA TTTTGGCTTAGGTCT Shew185_0268 309020 - 310003 + | 2OG-Fe(II) oxygenase Shew185_0269 310143 - 310538 + | hypothetical protein TERM 331 310608 - 310573 - T 82 -11.2 -3.25479 | gap 1, opp_overlap 310573, overlap 310566 TGACTAAATAGGTAA GTGCAGTTAGCGCTCGG GAT CCGA-CGTTGACTGCAC TTTTACTAGTTCTGC TERM 332 310573 - 310608 + T 100 -15.6 -4.37527 | gap 1, opp_overlap 310573 310566 TGACTAAATAGGTAA GTGCAGTTAGCGCTCGG GAT CCGA-CGTTGACTGCAC TTTTACTAGTTCTGC Shew185_0270 310776 - 310579 - | hypothetical protein TERM 333 310696 - 310725 + g 73 -2 -5.06816 | opp_overlap 310696 ATTAAACTCATCAAG GCAGAGCTGGTA ACGGCG TAGCTGCTCAGC TTTTTCTTCAGCGGT Shew185_0271 311122 - 311973 + | ribokinase-like domain-containing protein TERM 334 312106 - 312128 + F 100 -12.1 -5.52384 | GGTTAGTATGTTTTT TGCCTCGTT TCCCC AACGAGGCA TTTTTTTGCTCAAAA Shew185_0272 312291 - 313751 + | diguanylate cyclase Shew185_0273 313887 - 314582 + | MOSC domain-containing protein Shew185_0274 314620 - 314976 + | hypothetical protein TERM 335 315001 - 315026 + T 100 -16.3 -5.69473 | opp_overlap 315001 TGAGTTAAAGAAAAA CGCCTTAGATG TTTC CATCTAAGGCG TTTTTTTATGGTGTA TERM 336 315026 - 315001 - T 100 -16.3 -5.30616 | opp_overlap 315001 TGAGTTAAAGAAAAA CGCCTTAGATG TTTC CATCTAAGGCG TTTTTTTATGGTGTA Shew185_0275 316969 - 315053 - | methyl-accepting chemotaxis sensory transducer TERM 337 317292 - 317275 - R 100 -12.7 -5.49809 | opp_overlap 317273 CAAAGGTGAAAAAAA GGCGCTC CACT GAGCGCC GCTATTAACATTTAT Shew185_0276 318967 - 317318 - | electron-transferring-flavoprotein dehydrogenase TERM 338 318254 - 318224 - G 71 -7.4 -4.13246 | opp_overlap 318232 318249 CATGTGATACAGAAA GCCGCCACCCGATG CGC CCTCGGTTAGTGGC CAGCCACCTGTGTGC TERM 339 318349 - 318367 + g 78 -6.1 -4.68424 | overlap 318342 AATGCTGGGGTGTTT TACCATT ATCTA AATGGTA TTTTTCGATCAGTTG TERM 340 319542 - 319526 - g 73 -2.1 -5.08824 | overlap 319527 319535 319537 TCGGCACCCAAAAAA TCCGCAT AAC AGGCGGC GAACCCACCCTGCGT Shew185_0277 319303 - 320316 + | molybdenum cofactor biosynthesis protein A Shew185_0278 320412 - 320888 + | molybdenum cofactor biosynthesis protein C TERM 341 321215 - 321229 + G 77 -4.2 -5.01732 | ACGCCTGTAAACGAT GGTGAT GAA GTCGCC TTTTTTCCACCCGTT Shew185_0279 321005 - 321256 + | molybdopterin converting factor, subunit 1 TERM 342 321589 - 321576 - g 74 -9.5 -3.60098 | opp_overlap 321569 321582 AGCGCTCATCGCAAA GCCGC CTTC GCGGC CTGTGAATTCTTAAT Shew185_0280 321258 - 321725 + | molybdopterin biosynthesis MoaE protein TERM 343 321808 - 321785 - f 83 -5.2 -5.31059 | overlap 321787 ACATGAACGAAAAAA CGGCACTGAG GTGA CCCAATGCAG AGTTTGACCCGTTTC TERM 344 322563 - 322581 + G 80 -7.5 -4.55128 | overlap 322552 CAGACGCCGCCCGCG CCGTATT CACTC AATACGG TTTTGGTTTGCCAGT Shew185_0281 321803 - 322603 + | molybdenum ABC transporter, periplasmic molybdate-binding protein Shew185_0282 322612 - 323292 + | molybdate ABC transporter, inner membrane subunit Shew185_0283 323273 - 324376 + | ABC transporter related Shew185_0284 324552 - 324391 - | hypothetical protein Shew185_0285 325045 - 325566 + | hypothetical protein Shew185_0286 325627 - 326304 + | two component transcriptional regulator Shew185_0287 326354 - 327610 + | integral membrane sensor signal transduction histidine kinase TERM 345 327996 - 328009 + G 89 -3.7 -5.64006 | opp_overlap 327996 GCACTAAAGAAAATC CAGCG ATTA CGCAG TTTTTTTCATTAAGT Shew185_0288 327644 - 328336 + | pseudouridine synthase Rlu family protein Shew185_0289 329533 - 328364 - | diguanylate cyclase Shew185_0290 329797 - 329964 + | hypothetical protein TERM 346 330012 - 329984 - T 100 -16.3 -3.48276 | opp_overlap 329984 329990, overlap 329990 CTTTCTTCCACACAA TAAAAAGCGCAAT TTA ATTGCGCTTTTTA TGCTTCAAAATGAGC TERM 347 329984 - 330012 + T 100 -16.3 -2.72344 | opp_overlap 329984 329990, overlap 329990 CTTTCTTCCACACAA TAAAAAGCGCAAT TTA ATTGCGCTTTTTA TGCTTCAAAATGAGC TERM 348 330006 - 329990 - T 100 -10.9 -5.24796 | opp_overlap 329984 329990, overlap 329984 TCCACACAATAAAAA GCGCAAT TTA ATTGCGC TTTTTATGCTTCAAA TERM 349 329990 - 330006 + T 93 -10.9 -4.98255 | opp_overlap 329990 329984, overlap 329984 TCCACACAATAAAAA GCGCAAT TTA ATTGCGC TTTTTATGCTTCAAA Shew185_0291 332212 - 330035 - | TonB-dependent receptor TERM 350 331342 - 331353 + g 72 -5.8 -4.46112 | GGTTGTTAGCCGCTT CCCA TGGC TGGG TTTCTTTAACTGCGC TERM 351 331847 - 331862 + g 76 -9 -3.91911 | TTGACCCGAGCGACC CCCACT GCGA AGTGGG TTTGATTGCGGTACG TERM 352 332460 - 332474 + H 73 -8.6 -3.71917 | GCGAGTTCATGTTGT TAAGGC AGT GCCTTA TTTAGCGTTTAGCAT Shew185_0292 332619 - 332879 + | hypothetical protein Shew185_0293 333525 - 333013 - | peptidase M23B Shew185_0294 334167 - 333565 - | hypothetical protein TERM 353 334437 - 334462 + r 80 -11.2 -2.7563 | opp_overlap 334433 334432 GAATGGTAAACCGCA GTGGCTCTCT TTTGTT GGAGAGCCAC TGATTCAACGTTTTT Shew185_0295 335481 - 334525 - | Zn-dependent hydrolase of the beta-lactamase fold Shew185_0296 336695 - 335586 - | transposase IS4 family protein TERM 354 336778 - 336765 - H 74 -3.7 -5.02074 | TCATTTTTTAAAAAA GTGCG ATCT CGCCC TGCCTCAACATGGGC TERM 355 336924 - 336902 - H 100 -12.2 -5.94597 | opp_overlap 336907, overlap 336910 CAATATCAAAAAAAA GTAAACTACA CAG TGTAGTTTAC ATGCGGCGGTGTAAA Shew185_0297 336994 - 337605 + | TetR family transcriptional regulator TERM 356 337631 - 337654 + T 100 -15.4 -4.16814 | opp_overlap 337631 337635, overlap 337635 CCATGCTATTCAACA TAAAGGCCGC ATCT GCGGCCTTTA TTATTTATGTAATAC TERM 357 337654 - 337631 - T 100 -15.4 -3.09327 | opp_overlap 337631 337635, overlap 337635 CCATGCTATTCAACA TAAAGGCCGC ATCT GCGGCCTTTA TTATTTATGTAATAC TERM 358 337635 - 337650 + T 95 -11.8 -4.65458 | opp_overlap 337631 337635, overlap 337631 GCTATTCAACATAAA GGCCGC ATCT GCGGCC TTTATTATTTATGTA TERM 359 337650 - 337635 - T 95 -11.8 -4.21607 | opp_overlap 337635 337631, overlap 337631 GCTATTCAACATAAA GGCCGC ATCT GCGGCC TTTATTATTTATGTA Shew185_0298 339016 - 337673 - | anaerobic C4-dicarboxylate transporter Shew185_0299 339282 - 340460 + | hypothetical protein TERM 360 340558 - 340572 + G 77 -4.2 -5.055 | opp_overlap 340557, overlap 340560 AAATCGACCGAACAG GTCTTC AAA GAAGCC TTTTTTGCGCCTTGG TERM 361 341101 - 341118 + G 73 -9.8 -3.30507 | overlap 341099 341098 341117 GTGAAATGGCTCTGC GGCGGC CCTGGT GCCGCC TATCTTTGGGTTAAT Shew185_0300 340465 - 341586 + | aminotransferase class V TERM 362 341620 - 341643 + T 93 -7.5 -5.44721 | GCGGATAAATAGCTA TGCTCAAAC CTCAGT GTTTGGGCA TTTTTTTAGAGTCGT Shew185_0301 342845 - 341649 - | sodium:dicarboxylate symporter TERM 363 342845 - 342858 + H 70 -3.1 -4.87665 | TTATCTTTTGCCACA TAGGT AAAC GCCTA TTTTTATGAATAAGA TERM 364 344544 - 344531 - g 71 -4.5 -4.64861 | CTGTTTGAAAATAAA GTCAG GCAT CCGAC CGAGAAGTGGGCGCT Shew185_0303 344441 - 345004 + | hypothetical protein Shew185_0304 345005 - 346048 + | histidine kinase Shew185_0305 346077 - 346784 + | two component transcriptional regulator TERM 365 347338 - 347355 + G 74 -2.6 -5.1244 | opp_overlap 347339, overlap 347339 GTATTTCATCAATTC ACTGCC CTATAT GGCAGA TTTTTATGTTGATAA TERM 366 347584 - 347560 - g 75 -3.6 -5.11033 | gap 1, overlap 347562 GACAACCTTAAAAAA TAGCGATGATC TTTG GGTCATCGC-A TGGGAAGCGTCAGGC TERM 367 347583 - 347562 - g 77 -8.7 -4.17355 | overlap 347560 CAACCTTAAAAAATA GCGATGATC TTTG GGTCATCGC ATGGGAAGCGTCAGG Shew185_0306 347204 - 347875 + | hypothetical protein TERM 368 348160 - 348143 - T 100 -12.7 -5.28176 | opp_overlap 348135 348143 GCTAGGCATAAAAAA GCCCCGA CAAT TCGGGGC TTAATCAATTTGCGA TERM 369 348143 - 348160 + T 85 -12.7 -3.25088 | opp_overlap 348143, overlap 348135 GCTAGGCATAAAAAA GCCCCGA CAAT TCGGGGC TTAATCAATTTGCGA Shew185_0307 349592 - 348183 - | glutamine synthetase TERM 370 349760 - 349774 + H 89 -10 -4.23758 | ATTGGATCCGTGTTT GCACCA CTA TGGTGC TTTTGGCTGTGGCAT TERM 371 350517 - 350493 - H 70 -5.5 -4.40963 | overlap 350490 AGTGTTCAAAAATAA TCCTGTGCGCC AAG GCCGCTCTGGA GTAGAATGGCACGCT TERM 372 351696 - 351670 - g 76 -7.3 -4.46072 | gap 1, overlap 351672 TTGAAGAAACAGAAA GTCCAGAT-CGC TTCC GCGTATCTGGTC GTGGTGAATTGCATT Shew185_0308 350598 - 352427 + | GTP-binding protein TypA TERM 373 352472 - 352497 + T 100 -11.9 -5.08088 | opp_overlap 352472 CAATCGGTTTAAAAA GCCCTGCATAG GAAA CTATGTGGGGC TTTTTGTTGGGAGTT TERM 374 352497 - 352472 - T 81 -7.5 -4.58283 | opp_overlap 352472 CAATCGGTTTAAAAA GCCCTGCATAG GAAA CTATGTGGGGC TTTTTGTTGGGAGTT Shew185_0309 352672 - 352511 - | hypothetical protein Shew185_0310 354003 - 352981 - | diguanylate cyclase TERM 375 354160 - 354125 - R 79 -5.5 -4.84527 | opp_overlap 354125 354123 354122 354127, overlap 354127 CTTATATATTAAAAA TACTGCAGATAGTGA TGTAAG CCATTATCTGCAGTG TGCTTTTGGGGTATT TERM 376 354125 - 354160 + r 70 -9.2 -3.10946 | opp_overlap 354125 354127, overlap 354123 354122 354127 CTTATATATTAAAAA TACTGCAGATAGTG ATGTAAGC CATTATCTGCAGTG TGCTTTTGGGGTATT TERM 377 354158 - 354127 - R 75 -8.1 -4.03909 | opp_overlap 354125 354123 354122 354127, overlap 354125 TATATATTAAAAATA CTGCAGATAGTGA TGTAAG CCATTATCTGCAG TGTGCTTTTGGGGTA TERM 378 354127 - 354158 + r 73 -9.6 -3.10537 | opp_overlap 354127 354125, overlap 354125 354123 354122 TATATATTAAAAATA CTGCAGATAGTG ATGTAAGC CATTATCTGCAG TGTGCTTTTGGGGTA Shew185_0311 355392 - 354178 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 379 355633 - 355608 - R 100 -12.6 -5.06735 | CACAAAGCATAAAAA GCCCCAGCAC TTTATT GTGCTAGGGC TTAGGAGTTAAGTAG TERM 380 355671 - 355691 + r 73 -6.9 -4.19336 | overlap 355675 GGTTCAACTTTTTGA TTTTTCGAG TGA CTCGATAAA TTTGTTCGACTCGTT Shew185_0312 356312 - 355659 - | hypothetical protein Shew185_0313 356563 - 356342 - | hypothetical protein TERM 381 357173 - 357188 + G 77 -4 -5.06816 | gap 1, overlap 357176 GAAGCTGAAGCTTTA TCGGGCA TGT TGCC-GA TTTTTATTGCGCGCT Shew185_0314 356645 - 357616 + | ribonuclease BN Shew185_0315 357653 - 358606 + | alpha/beta hydrolase fold TERM 382 358774 - 358788 + G 73 -10 -3.34895 | opp_overlap 358786, overlap 358766 GAAGCTGCCGCTGAG CGCTTG TAT CAAGCG TTGATTAACGCTAAC Shew185_0316 358603 - 359208 + | hypothetical protein Shew185_0317 359226 - 359663 + | D-tyrosyl-tRNA deacylase Shew185_0318 359811 - 360263 + | thioesterase domain-containing protein Shew185_0319 360423 - 361019 + | azoreductase TERM 383 361067 - 361089 + T 100 -13.5 -5.04597 | opp_overlap 361067 TAGCTGAATAAATAA TGCCAGCCT TTGAT AGGCTGGCA TTTTTGTATGTCCAT TERM 384 361089 - 361067 - T 100 -13.5 -4.21438 | opp_overlap 361067 TAGCTGAATAAATAA TGCCAGCCT TTGAT AGGCTGGCA TTTTTGTATGTCCAT Shew185_0320 361429 - 361106 - | rhodanese domain-containing protein Shew185_0321 362150 - 361575 - | XRE family transcriptional regulator Shew185_0322 362277 - 363464 + | benzoate transporter Shew185_0323 363972 - 363517 - | GCN5-related N-acetyltransferase TERM 385 364454 - 364481 + r 89 -9.8 -4.2528 | opp_overlap 364457, overlap 364455 364457 TCGAAGCGAATATAA AAATGGCCGAGC ATAA GCTCGGCCATGA TTTGTTCGGTTAAGC TERM 386 364455 - 364480 + r 91 -13.3 -3.14686 | opp_overlap 364457, overlap 364454 364457 CGAAGCGAATATAAA AATGGCCGAGC ATAA GCTCGGCCATG ATTTGTTCGGTTAAG TERM 387 364478 - 364457 - R 100 -15.9 -5.1167 | opp_overlap 364455 364454 364457 AAGCGAATATAAAAA TGGCCGAGC ATAA GCTCGGCCA TGATTTGTTCGGTTA TERM 388 364457 - 364478 + r 100 -15.9 -3.12773 | opp_overlap 364457, overlap 364455 364454 AAGCGAATATAAAAA TGGCCGAGC ATAA GCTCGGCCA TGATTTGTTCGGTTA Shew185_0324 365255 - 364512 - | hypothetical protein Shew185_0325 366543 - 365284 - | 3-oxoacyl-(acyl carrier protein) synthase II Shew185_0326 367269 - 366544 - | 3-ketoacyl-(acyl-carrier-protein) reductase Shew185_0327 367982 - 367446 - | thioester dehydrase family protein TERM 389 368031 - 368007 - R 70 -2.8 -5.0538 | gap 1, overlap 368010 CGTTACGGCAAAAAA TCAGGCTGGCA TTGC TGCC-GCCAAA GGCGAAGGAATTACT Shew185_0328 369183 - 367984 - | 3-oxoacyl-(acyl carrier protein) synthase I Shew185_0329 370020 - 369232 - | hypothetical protein TERM 390 369285 - 369313 + g 71 -3.8 -4.71426 | gap 1 GCATAGTTAAGCTGA TGTGGGC-TTGCC ATAG GGCATCGCCGACA TTTTGTTGATAACGG Shew185_0330 371314 - 370025 - | monooxygenase FAD-binding TERM 391 371050 - 371060 + g 70 -2.4 -4.91511 | TGCCATTGCGACGAA AGGC TGC GCCA TTTTTATGCTGGAAT TERM 392 371225 - 371191 - G 78 -11.5 -2.94293 | opp_overlap 371184, overlap 371185 371188 TCTCTAACACAAGCA CG-CGCTTGCCTTGCTG GTG CAGCA-GGCTAGCGGCG ATGGCGCCTGAAGGC Shew185_0331 373845 - 371338 - | hypothetical protein TERM 393 371447 - 371416 - G 71 -3 -4.98531 | gap 1, overlap 371422 CGGCGAAAGTAAAAA GGTAAACCCTAT-GC CCA GCGACAGGGTTAAGC CAAAGTAATGAATCG TERM 394 373566 - 373583 + g 76 -9.1 -3.84246 | GCATCAAGAGCTTAG CCGCAGC GATT GCTGTGG TTTCATCCTTGGCGA Shew185_0332 374651 - 373848 - | hypothetical protein TERM 395 374515 - 374557 + g 85 -12.1 -3.28712 | gap 1, opp_overlap 374503, overlap 374519 TAATTGCCGGGCGTG GCAAGCTTGTCACTTAAGGC TTCG GCCTTGAGTGGCTGGC-TGC TTATCAAAGCAAAAG TERM 396 374519 - 374554 + g 81 -12.6 -2.82623 | overlap 374515 TGCCGGGCGTGGCAA GCTTGTCACTTAAGGC TTCG GCCTTGAGTGGCTGGC TGCTTATCAAAGCAA Shew185_0333 375082 - 374651 - | thioesterase superfamily protein Shew185_0334 376653 - 375079 - | histidine ammonia-lyase Shew185_0335 378509 - 376650 - | glycosyl transferase family protein Shew185_0336 378907 - 378503 - | thioester dehydrase family protein TERM 397 378596 - 378622 + g 73 -7.2 -4.27316 | overlap 378597 CGACGCGTAGCGGTT GTCACCATCGCT ATA GGCGAAGGTGAG TTTTGCCTTAGCGGC TERM 398 378597 - 378621 + g 76 -10.7 -3.16068 | overlap 378596 GACGCGTAGCGGTTG TCACCATCGCT ATA GGCGAAGGTGA GTTTTGCCTTAGCGG Shew185_0337 380264 - 378900 - | aconitate hydratase TERM 399 379544 - 379526 - G 75 -5.2 -4.70659 | opp_overlap 379536, overlap 379530 CGCCAGAGCTAAAAA CTAAGCTC GGT GAGCGCAG TTGCCGCTCGTGCTC Shew185_0338 380809 - 380261 - | hypothetical protein TERM 400 380599 - 380581 - G 71 -4.4 -4.67608 | CAGGGTAATACAAAA GCCAGTCG CTG CGCTTGGC AAGATAACTGCCTGC Shew185_0339 381057 - 380809 - | acyl carrier protein Shew185_0340 381321 - 381067 - | acyl carrier protein, putative Shew185_0341 382129 - 381305 - | phospholipid/glycerol acyltransferase Shew185_0342 382907 - 382173 - | hypothetical protein TERM 401 383245 - 383217 - R 82 -11.8 -3.04517 | opp_overlap 383219 383224, overlap 383224 ATTTGCGCTCAAAAT GAAAAAAGGCGC ACTGA GCGCCTTTTGTC TTAACCACGGCAAGG TERM 402 383224 - 383238 + r 88 -8.5 -4.66537 | opp_overlap 383217 383224, overlap 383219 CTCAAAATGAAAAAA GGCGC ACTGA GCGCC TTTTGTCTTAACCAC TERM 403 383238 - 383224 - R 95 -8.5 -5.46698 | opp_overlap 383224 383219, overlap 383217 CTCAAAATGAAAAAA GGCGC ACTGA GCGCC TTTTGTCTTAACCAC Shew185_0343 384156 - 383263 - | hypothetical protein Shew185_0344 386445 - 384355 - | ATP-dependent DNA helicase RecG Shew185_0345 387211 - 386615 - | two component LuxR family transcriptional regulator Shew185_0346 388290 - 387211 - | integral membrane sensor signal transduction histidine kinase TERM 404 388400 - 388379 - R 75 -10.1 -3.14344 | TACTCTGTTTAGGAA TTGGCGCTG GGGT CAGCGCCAT CAGTCCCTGTTAACA Shew185_0347 389127 - 388423 - | TPR repeat-containing protein TERM 405 389315 - 389297 - R 100 -14.6 -4.39568 | opp_overlap 389297 ACCCAGATAGCAAAA CACCGGAG AGG CTCCGGTG TTTTAGGTGGATATT TERM 406 389297 - 389315 + r 100 -14.6 -4.20932 | opp_overlap 389297 ACCCAGATAGCAAAA CACCGGAG AGG CTCCGGTG TTTTAGGTGGATATT Shew185_0348 390286 - 389342 - | CaCA family Na(+)/Ca(+) antiporter TERM 407 390403 - 390418 + r 79 -10.4 -3.60798 | opp_overlap 390403, overlap 390399 ATATGTCATAAAAAA GCACGC CGAG GCGTGC TTGATTTGTGCCGAT TERM 408 390418 - 390403 - R 100 -10.4 -5.26918 | opp_overlap 390403 390399 ATATGTCATAAAAAA GCACGC CGAG GCGTGC TTGATTTGTGCCGAT Shew185_0349 392130 - 390466 - | AMP-dependent synthetase and ligase TERM 409 392310 - 392333 + r 70 -9.6 -2.60075 | opp_overlap 392315, overlap 392315 GGGGGGGCGGTAACA AAAAAGGCGC CGCA GCGCCTTTTC GTTGGTTGAAGGGCA TERM 410 392315 - 392328 + r 91 -9.5 -4.4959 | opp_overlap 392315, overlap 392310 GGCGGTAACAAAAAA GGCGC CGCA GCGCC TTTTCGTTGGTTGAA TERM 411 392328 - 392315 - R 100 -9.5 -5.4505 | opp_overlap 392310 392315 GGCGGTAACAAAAAA GGCGC CGCA GCGCC TTTTCGTTGGTTGAA Shew185_0350 392742 - 392359 - | putative endoribonuclease L-PSP Shew185_0351 394873 - 392768 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Shew185_0352 395197 - 394919 - | DNA-directed RNA polymerase subunit omega Shew185_0353 395879 - 395247 - | guanylate kinase TERM 412 395380 - 395368 - G 73 -7.7 -4.1196 | AACGCAGTGTCAAAA TCGTC GTT GACGA TAATAAAATCATATT Shew185_0354 396132 - 397775 + | hypothetical protein Shew185_0355 397980 - 398852 + | hypothetical protein Shew185_0356 398845 - 399909 + | aminoglycoside phosphotransferase TERM 413 399965 - 399999 + F 100 -18 -3.76759 | opp_overlap 399966 399971, overlap 399966 399971 CTAATGCACTGATAA ACAAAACGCCCAAGGC TTT GCTTTGGGCGTTTTGC TTTAATACGATTGCT TERM 414 399998 - 399966 - f 100 -19.3 -3.93583 | opp_overlap 399966 399965 399971, overlap 399971 TAATGCACTGATAAA CAAAACGCCCAAGGC TTT GCTTTGGGCGTTTTG CTTTAATACGATTGC TERM 415 399966 - 399998 + F 100 -21.5 -2.85574 | opp_overlap 399966 399971, overlap 399965 399971 TAATGCACTGATAAA CAAAACGCCCAAGGC TTT GCTTTGGGCGTTTTG CTTTAATACGATTGC TERM 416 399971 - 399993 + F 100 -15.6 -4.58773 | opp_overlap 399966 399971, overlap 399966 399965 CACTGATAAACAAAA CGCCCAAGGC TTT GCTTTGGGCG TTTTGCTTTAATACG TERM 417 399993 - 399971 - f 100 -13.4 -5.0065 | opp_overlap 399971 399966 399965, overlap 399966 CACTGATAAACAAAA CGCCCAAGGC TTT GCTTTGGGCG TTTTGCTTTAATACG TERM 418 400851 - 400877 + G 76 -11.6 -2.89323 | overlap 400872 AGTACAGTTTATTTG TCGCCAGTATGC AGG GCATGGTGGCGA TCTCTGCGCCATTTT TERM 419 400872 - 400888 + G 82 -5.1 -5.1361 | overlap 400851 GTATGCAGGGCATGG TGGCG ATCTCTG CGCCA TTTTTTGCCGTTTAT Shew185_0357 400106 - 401524 + | major facilitator transporter Shew185_0358 402451 - 401534 - | hypothetical protein Shew185_0359 402813 - 403940 + | filamentation induced by cAMP protein Fic TERM 420 404536 - 404552 + G 100 -10.9 -5.06451 | ATTTCCATTAACGGG GCTCACT CAG AGTGAGC TTTTTTGCGGTAGTA TERM 421 405795 - 405785 - g 73 -8.2 -3.86312 | opp_overlap 405784 ACTCACAATGAACAA CGCG TGA CGCG CATTATTCGCAGCCT Shew185_0360 404165 - 407332 + | type III restriction protein res subunit Shew185_0361 408232 - 407336 - | LysR family transcriptional regulator TERM 422 407821 - 407776 - G 75 -11.9 -2.72344 | TTTTACGGGCAATCA GGCTTGAATCTGGCAGTTCGC CGAT GCGAATCGCCAGATCGAATCC GCCAGCAATTAAATC Shew185_0362 408472 - 409209 + | nucleotidase Shew185_0363 409882 - 409244 - | ERCC4 domain-containing protein TERM 423 409765 - 409780 + g 75 -3.2 -5.1675 | opp_overlap 409752 409765 409767 CATTGAGTTGATAAT CACCCA ATTT TAGGTG TTTTTTGATGAGTGA TERM 424 411152 - 411138 - g 73 -3.5 -4.92756 | ATTAGCAAAAATAAA CAGCG TAAAG CACTG ATTAAGCGGTTAGAA Shew185_0364 410064 - 411197 + | hypothetical protein TERM 425 411647 - 411626 - g 73 -7.2 -4.20084 | overlap 411628 AGTACGTATCTAAAA GATGCGCG GCTGAA CGCGCAGC TCTCGCAAAGCAAGG TERM 426 411645 - 411628 - g 71 -8.4 -3.6993 | overlap 411626 TACGTATCTAAAAGA TGCGCG GCTGAA CGCGCA GCTCTCGCAAAGCAA Shew185_0365 411584 - 411865 + | helix-turn-helix domain-containing protein Shew185_0366 411865 - 412044 + | HipA-like protein TERM 427 412080 - 412047 - T 100 -13.5 -4.36914 | gap 1, opp_overlap 412048 412055, overlap 412049 412055 TCCTGCGCCATAAAA TA-CAAAAAGCCCTTA CAT TAAGGGCTTTTTGGTA TCTAAAACGCGTTAA TERM 428 412048 - 412078 + T 93 -14.2 -2.87463 | opp_overlap 412047 412049 412055, overlap 412055 CCTGCGCCATAAAAT ACAAAAAGCCCTTA CAT TAAGGGCTTTTTGG TATCTAAAACGCGTT TERM 429 412077 - 412049 - T 100 -17.7 -3.79419 | opp_overlap 412048 412055, overlap 412047 412055 CTGCGCCATAAAATA CAAAAAGCCCTTA CAT TAAGGGCTTTTTG GTATCTAAAACGCGT TERM 430 412055 - 412071 + T 93 -10.9 -4.84527 | opp_overlap 412055 412049 412047, overlap 412048 CATAAAATACAAAAA GCCCTTA CAT TAAGGGC TTTTTGGTATCTAAA TERM 431 412071 - 412055 - T 100 -10.9 -5.32599 | opp_overlap 412048 412055, overlap 412049 412047 CATAAAATACAAAAA GCCCTTA CAT TAAGGGC TTTTTGGTATCTAAA Shew185_0367 412965 - 412102 - | hypothetical protein TERM 432 412245 - 412263 + g 74 -3 -5.03314 | opp_overlap 412244 412245, overlap 412244 TCATAAAGTCTAAAC GGCGAC CTTCGCT GCCGCC TTTTTTGAGGATGCG Shew185_0369 413503 - 414216 + | ribonuclease PH TERM 433 414235 - 414261 + F 74 -3.7 -5.10461 | gap 1, opp_overlap 414235 TGTGGTGATGAAAAA GCCCCGTCAT GTTATAGA GTG-CGGGGC TTTTTATTAGCTGCA Shew185_0370 414393 - 415034 + | orotate phosphoribosyltransferase TERM 434 415190 - 415161 - T 100 -13.7 -5.83211 | opp_overlap 415161 TATGAAAACAAAAAA CGCTGCGATTC TATAGAAG GAATCGCAGCG TTTTTTTGTTGATTT TERM 435 415161 - 415190 + T 100 -14.4 -5.9003 | opp_overlap 415161 TATGAAAACAAAAAA CGCTGCGATTCT ATAGAA GGAATCGCAGCG TTTTTTTGTTGATTT Shew185_0371 415911 - 415261 - | GTP cyclohydrolase I TERM 436 415503 - 415493 - G 74 -6.8 -4.41348 | opp_overlap 415493 415492 415502 CGTTGGGCAAAGAAA CGCA CGA TGCG ATTAATCTTTGATAA TERM 437 415966 - 415950 - R 74 -5.1 -4.73682 | opp_overlap 415963 GGCTATAACAGAAAA TCTATGC TGA GCATCGA GTGGTACTTGGGTTG TERM 438 416096 - 416121 + r 73 -8.4 -3.64822 | gap 1, opp_overlap 416096 GGGCCACATGAAAAA GCCGATAGTCC TTATC GGA-TATCGGC TTTAAATCAGCCACT TERM 439 416121 - 416096 - R 88 -8.4 -4.8048 | gap 1, opp_overlap 416096 GGGCCACATGAAAAA GCCGATAGTCC TTATC GGA-TATCGGC TTTAAATCAGCCACT TERM 440 416166 - 416128 - R 72 -8.8 -3.54129 | opp_overlap 416153, overlap 416131 GATATCGGCTTTAAA TCAGCCACTGCCAATCGA GTT TAGACTGGCAGTGACGGC AAGTTTGAGTCAATC TERM 441 416163 - 416131 - R 91 -13.5 -2.90615 | opp_overlap 416153, overlap 416128 ATCGGCTTTAAATCA GCCACTGCCAATCGA GTT TAGACTGGCAGTGAC GGCAAGTTTGAGTCA Shew185_0372 418170 - 416182 - | peptidase S9 prolyl oligopeptidase TERM 442 418065 - 418091 + g 72 -11 -2.63596 | opp_overlap 418060 CTTTACTGAACTGCT GTGCAAGCAATA AGG TATTGCTTGCAG TGGTATCGGCTGCAA TERM 443 418293 - 418268 - R 95 -11.3 -4.67234 | opp_overlap 418268 418272, overlap 418272 AGGGAAGGTTAAAAA TAAAGGACGAT AGTT ACCGTCCTTTA TGTTGAAAAATCATT TERM 444 418289 - 418272 - R 86 -7.7 -4.88293 | opp_overlap 418268 418272, overlap 418268 AAGGTTAAAAATAAA GGACGAT AGTT ACCGTCC TTTATGTTGAAAAAT TERM 445 418305 - 418327 + r 75 -10 -3.05384 | opp_overlap 418305 418304, overlap 418307 TTTATGTTGAAAAAT CATTAGCTTT GTA AAAGCTGATG TTGGATAAAACGCCA Shew185_0373 418900 - 418307 - | nucleoid occlusion protein Shew185_0374 419393 - 418935 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Shew185_0375 420613 - 419390 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 446 421067 - 421050 - g 73 -7 -4.183 | opp_overlap 421050 421049 TCAAGTTTTAACAAA TCCCGA TTTAAC TCGGGA CTATTTAATGAGACA Shew185_0376 420736 - 421413 + | DNA repair protein RadC TERM 447 421614 - 421603 - g 73 -2.2 -5.08824 | gap 1, opp_overlap 421603 421605, overlap 421605 TTCGCACGCAAAAAA CG-CG ACC CGTCG TCGTTTTTTACCTAA TERM 448 421605 - 421617 + G 80 -4.8 -5.09225 | opp_overlap 421603 421605, overlap 421603 CGCACGCAAAAAACG CGAC CCGTC GTCG TTTTTTACCTAACCT Shew185_0377 421535 - 421771 + | ribosomal protein L28 TERM 449 421877 - 421861 - g 85 -2.9 -5.55698 | CACAACTGAAAAAAA CAAGCGT AAC ATGCCTG AAAAAATGGAAATCA Shew185_0378 421778 - 421951 + | 50S ribosomal protein L33 TERM 450 421976 - 421993 + F 100 -11.3 -5.82388 | opp_overlap 421976 AGTGTTTCGAGAAAA GCCCCTT ATTT AAGGGGC TTTTTTTTGCGCTTT TERM 451 421993 - 421976 - f 93 -11.3 -4.37092 | opp_overlap 421976 AGTGTTTCGAGAAAA GCCCCTT ATTT AAGGGGC TTTTTTTTGCGCTTT Shew185_0379 422275 - 423594 + | N-acetylglutamate synthase TERM 452 423619 - 423649 + F 93 -9.9 -5.08601 | gap 1, opp_overlap 423619 AATCAATCCAATCAA TGCCAGC-CTAGTA CTCA TATTAGCGCTGGCA TTTTTGTTGACATAA TERM 453 423658 - 423670 + F 71 -6.3 -4.1673 | GCTGGCATTTTTGTT GACAT AAT ATGTC TTTGTTGGCAGATTA Shew185_0380 423714 - 424232 + | hypothetical protein TERM 454 424266 - 424287 + T 100 -14.5 -4.39571 | TCTGCAACTGTGTAT CGGCGTGAT AATG ATCACGCCG TTTTGCGTTTATAGG Shew185_0381 425164 - 424280 - | transporter DMT superfamily protein TERM 455 425279 - 425329 + r 100 -17.2 -3.54543 | opp_overlap 425285 425295, overlap 425286 425295 AGAGATTGAATGGCC GATCAACGCCAGTAAACATCTT ACTAATC AAGATGTTTACTGGCTTTGAAC TTTAAGACGGTAAAT TERM 456 425323 - 425285 - R 95 -14.1 -3.15579 | opp_overlap 425279 425286 425295, overlap 425295 TGAATGGCCGATCAA CGCCAGTAAACATCTTA CTAAT CAAGATGTTTACTGGCT TTGAACTTTAAGACG TERM 457 425286 - 425322 + r 100 -16.9 -3.71649 | opp_overlap 425285 425295, overlap 425279 425295 GAATGGCCGATCAAC GCCAGTAAACATCTT ACTAATC AAGATGTTTACTGGC TTTGAACTTTAAGAC Shew185_0382 425830 - 425366 - | hypothetical protein TERM 458 427101 - 427084 - g 76 -9.1 -3.80573 | gap 1 CTTACTACCAGGAAA CG-GGCCG TGC CGGCCGCG ATGGGCTTGATGCTG Shew185_0383 426117 - 427940 + | ATP-dependent DNA helicase RecQ Shew185_0384 429703 - 427922 - | response regulator receiver protein TERM 459 428219 - 428236 + g 78 -11.3 -3.41341 | overlap 428217 CTCATCTTGCAGGGG CGGCAAG TCAA CTTGCCG TATTTGACTCGCATT TERM 460 428478 - 428510 + g 70 -9.9 -3.22924 | overlap 428477 428506 AGGATCGATGCCTTT TCTGGCGCAGGATTA TTC TGATCCTGCTGCAGA TCTTGCTGATTTAGA TERM 461 429770 - 429797 + H 70 -5.8 -4.37092 | GATTATAACTTTTCT TAATCGTTTTTT GCAT AAAAAACTATTA TTTTCTAAGGGGAAT TERM 462 430127 - 430147 + H 100 -9.7 -5.4251 | opp_overlap 430127 CAAAGCATTCACAAA CCCCGCA CAAATGT TGCGGGG TTTTTTGTATCTGAA TERM 463 430147 - 430127 - H 83 -9.7 -3.96224 | opp_overlap 430127 CAAAGCATTCACAAA CCCCGCA CAAATGT TGCGGGG TTTTTTGTATCTGAA TERM 464 430574 - 430603 + G 71 -9.2 -3.54129 | CAAGTGTTAGAGATG GCGGTGGGCGCA GTGAAA TACGCCCGTCGC TTTACCGACGATGTG Shew185_0385 430211 - 431779 + | 2-isopropylmalate synthase Shew185_0386 431850 - 432944 + | 3-isopropylmalate dehydrogenase Shew185_0387 432944 - 434350 + | isopropylmalate isomerase large subunit Shew185_0388 434378 - 434983 + | isopropylmalate isomerase small subunit TERM 465 435026 - 435049 + F 100 -16.8 -5.10933 | opp_overlap 435026 TGAGTCCATATTTAA GCGCCTAGGT TAAC ACCTAGGCGC TTTTGTTTTAAATCA TERM 466 435049 - 435026 - f 100 -16.8 -3.12999 | opp_overlap 435026 TGAGTCCATATTTAA GCGCCTAGGT TAAC ACCTAGGCGC TTTTGTTTTAAATCA TERM 467 436125 - 436113 - g 79 -10.5 -3.74693 | GTCGATGGTATCAAA CCGGC TCT GCCGG CTCCCGTGCAGGCAA Shew185_0389 435510 - 436859 + | membrane protein involved in aromatic hydrocarbon degradation TERM 468 436880 - 436897 + F 100 -11.3 -5.29782 | opp_overlap 436880 GCGTAGTTTAAAAAA GCCCTGA ATCT TCAGGGC TTTTTTATGGCTATA TERM 469 436897 - 436880 - f 95 -11.3 -5.0538 | opp_overlap 436880 GCGTAGTTTAAAAAA GCCCTGA ATCT TCAGGGC TTTTTTATGGCTATA TERM 470 437777 - 437811 + G 80 -12.2 -2.87132 | overlap 437779 AAGTCGCAGGGATGG CGGGTGACCAACAAGC GGC GCTTTTTGGTCAGCTG TGTGTCGAGCCCGGC TERM 471 437779 - 437809 + G 74 -11.2 -2.98823 | overlap 437777 GTCGCAGGGATGGCG GGTGACCAACAAGC GGC GCTTTTTGGTCAGC TGTGTGTCGAGCCCG TERM 472 438272 - 438296 + G 74 -2.7 -5.16237 | overlap 438275 438276 TTAAGCGTTTGAAGG TGGATGGCGGC GCG GTCGCCAATGA TTTTTTGATGCAGTT Shew185_0390 437053 - 438537 + | glycerol kinase TERM 473 438580 - 438561 - T 79 -10.8 -3.10112 | overlap 438542 ACTTAAGCTATTCAA CTCAAGTC GTTG GACTTGAG ACATGCTTAAATTTG TERM 474 438636 - 438670 + T 76 -10.9 -2.59132 | gap 1, opp_overlap 438641, overlap 438634 438641 TCGATTGTGGTGAAT AAAAAGGCGCTAATCC AATA GGATT-GCGCCTTTTC CGTTTTATATCAGTA TERM 475 438641 - 438665 + T 91 -10.8 -4.46854 | gap 1, opp_overlap 438641, overlap 438636 438634 TGTGGTGAATAAAAA GGCGCTAATCC AATA GGATT-GCGCC TTTTCCGTTTTATAT TERM 476 438665 - 438641 - T 93 -10.8 -5.06414 | gap 1, opp_overlap 438641 438636 438634 TGTGGTGAATAAAAA GGCGCTAATCC AATA GGATT-GCGCC TTTTCCGTTTTATAT Shew185_0391 439020 - 438691 - | hypothetical protein TERM 477 439663 - 439653 - H 70 -5.4 -4.42653 | ACTGGATTTATAAAA GGAT CCC ATCC CTTGACATTGCTTGT Shew185_0392 439757 - 440215 + | cell division protein MraZ TERM 478 440413 - 440390 - g 71 -7.4 -4.09739 | opp_overlap 440380, overlap 440391 GCAACTCGGTGAAAA TGGCCGATTG ATCG CAATCGACCG TGACCCTCAAGCAAT TERM 479 440412 - 440391 - g 74 -10.9 -3.05522 | opp_overlap 440380, overlap 440390 CAACTCGGTGAAAAT GGCCGATTG ATCG CAATCGACC GTGACCCTCAAGCAA TERM 480 441092 - 441074 - g 73 -8.8 -3.92143 | opp_overlap 441089, overlap 441087 AGATCAAATTAACAA GTCGCGTA AGT TACGCGCC GTGGGCAAGGCGATT Shew185_0393 440247 - 441188 + | S-adenosyl-methyltransferase MraW Shew185_0394 441199 - 441513 + | cell division protein FtsL TERM 481 442901 - 442885 - g 78 -5.7 -4.82855 | TATGAAACTGAAAAA GCCCCCC ATC GGTGAGC GAGTTATTTCTGAAG TERM 482 442978 - 442964 - g 73 -3.4 -4.96848 | GGCGTGACAGAAAAA GGCGGC ACC GGCACC TTGGCACATATCGAT Shew185_0395 441527 - 443281 + | peptidoglycan glycosyltransferase TERM 483 443366 - 443382 + G 73 -5.1 -4.59773 | opp_overlap 443357 443368, overlap 443355 443368 TAGATAGCCGCGCAA TACGTCG CGG CGATGTG TTTTTGGCGCTGCCA Shew185_0396 443278 - 444777 + | UDP-N-acetylmuramyl-tripeptide synthetase TERM 484 445556 - 445570 + G 77 -6.4 -4.48741 | opp_overlap 445548, overlap 445548 TCATAAGGCCAATGC CGATGG CTG CTATCG TTTTATGCTCAATTA Shew185_0397 444774 - 446156 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Shew185_0398 446157 - 447239 + | phospho-N-acetylmuramoyl-pentapeptide-transferase Shew185_0399 447246 - 448565 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 485 448745 - 448755 + G 95 -8.2 -5.19275 | AAGCGCAAACGCTCA CGGG TAA CCCG TTTTATTTTATGACT Shew185_0400 448555 - 449766 + | cell division protein FtsW TERM 486 450776 - 450759 - g 70 -7.7 -3.81548 | AATGACAGAACAGAA TTAGCCC GTAT GGGCCAA AGAGCGAGAGACGTT Shew185_0401 449766 - 450854 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Shew185_0402 450857 - 452323 + | UDP-N-acetylmuramate--alanine ligase Shew185_0403 452436 - 453224 + | polypeptide-transport-associated domain-containing protein Shew185_0404 453205 - 454440 + | cell division protein FtsA TERM 487 454805 - 454819 + G 73 -10 -3.36327 | GCGGTGGTACAGGTA CTGGTG CTG CACCAG TTGTCGCTCAAATCG TERM 488 455113 - 455097 - g 73 -10.1 -3.14931 | opp_overlap 455101 TCCAGGTCTGATTAA CGTCGAC TTC GCCGACG TGAAGACTGTGATGT Shew185_0405 454474 - 455661 + | cell division protein FtsZ Shew185_0406 455842 - 456762 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 489 456785 - 456807 + T 100 -16.3 -4.77757 | opp_overlap 456778 TGAGATTATTTATTA CGGCTGGCC AATGA GGCCAGCCG TTTTAGTTTTTCGCC Shew185_0407 457221 - 456775 - | hypothetical protein TERM 490 458040 - 458026 - g 81 -10 -4.07885 | GATGTGGTCGCAAAA GGCGAT GCA ATCGCC AGTATGGGAAGCACT Shew185_0408 457249 - 458148 + | peptidase M23B TERM 491 459325 - 459315 - g 75 -5.4 -4.68645 | TATTCAAAACGAAAA CCAA ACA TTGG CTTCAATTACCTTCC Shew185_0409 458209 - 460935 + | preprotein translocase subunit SecA TERM 492 460987 - 461006 + T 100 -10.8 -5.52807 | opp_overlap 460987 AGAACGCACACTAAA GGCAACTT ATCT AAGTTGCC TTTTTATTTCTTCTT TERM 493 461006 - 460987 - T 86 -10.8 -3.86684 | opp_overlap 460987 AGAACGCACACTAAA GGCAACTT ATCT AAGTTGCC TTTTTATTTCTTCTT TERM 494 461220 - 461209 - T 72 -3.6 -5.00884 | ATTTTTCTCAAAAAA GCCC TTGC GGAC TTTCTCAATCTCCCT TERM 495 463613 - 463643 + T 90 -8.5 -5.00884 | opp_overlap 463612 ACTATGGATAGAGAT GCCAAAGATAA ACTTAAAAA TTATCTTTGGC TTTTTTAAGCCCGCT TERM 496 463747 - 463724 - T 91 -10.4 -4.58213 | opp_overlap 463724, overlap 463725 TAATTAATTACAAAA CGTTCAATGC GAAA GCATTGAACA TGAGTTCTCAAACAC TERM 497 463746 - 463725 - T 86 -11.7 -3.33843 | opp_overlap 463724, overlap 463724 AATTAATTACAAAAC GTTCAATGC GAAA GCATTGAAC ATGAGTTCTCAAACA TERM 498 463881 - 463911 + T 90 -13.4 -2.90194 | opp_overlap 463869 463868 463864, overlap 463884 463890 AAGCTGGTCGCAATG CGACCCAGGTGAGT GAA ACTCATTTGGGTTG TATGGTTAAGCGACT TERM 499 463884 - 463908 + T 88 -11.5 -3.59946 | opp_overlap 463869 463868 463864, overlap 463881 463890 CTGGTCGCAATGCGA CCCAGGTGAGT GAA ACTCATTTGGG TTGTATGGTTAAGCG TERM 500 464399 - 464387 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 501 465195 - 465179 - T 86 -9.4 -4.08546 | overlap 465192 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 502 465712 - 465701 - T 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GCAC TGTG CAAACTCGCAAGAGG TERM 503 467438 - 467420 - T 77 -10.3 -3.39142 | opp_overlap 467420 TTGAGATGTAACGAA GCCAGCT GAATA AGCTGGC TTTTTTGCGTTTGAA TERM 504 467420 - 467438 + T 100 -10.3 -5.22039 | opp_overlap 467420 TTGAGATGTAACGAA GCCAGCT GAATA AGCTGGC TTTTTTGCGTTTGAA TERM 505 467573 - 467588 + T 89 -10.4 -4.26351 | opp_overlap 467573 ACCAGATACAAAAAA GCAGCC ATAA GGCTGC TTTCTTCAATTGATA TERM 506 467588 - 467573 - T 100 -10.4 -5.43414 | opp_overlap 467573 ACCAGATACAAAAAA GCAGCC ATAA GGCTGC TTTCTTCAATTGATA Shew185_0410 468628 - 467621 - | delta-aminolevulinic acid dehydratase Shew185_0411 470524 - 468638 - | diguanylate cyclase Shew185_0412 471320 - 470517 - | TatD-related deoxyribonuclease Shew185_0413 471847 - 471320 - | hypothetical protein Shew185_0414 472648 - 471893 - | Sec-independent protein translocase, TatC subunit Shew185_0415 473167 - 472652 - | twin-arginine translocation protein, TatB subunit Shew185_0416 473413 - 473174 - | twin arginine-targeting protein translocase Shew185_0417 475122 - 473473 - | 2-polyprenylphenol 6-hydroxylase TERM 507 473677 - 473694 + g 71 -8.5 -3.76968 | opp_overlap 473691 CTTATCTAGCATTTG TTGCTGA GAAC TCAGCAA TTTCCTGCCTAACTT Shew185_0418 475739 - 475119 - | hypothetical protein Shew185_0419 476494 - 475739 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 508 476750 - 476734 - R 70 -9.4 -2.59431 | opp_overlap 476712 GTTGGCTATAACTGA TGGCGC TCATT GCGCCA AAAACTGTATTCGAG Shew185_0420 477804 - 476740 - | arginase/agmatinase/formiminoglutamase TERM 509 476955 - 476912 - G 93 -14.5 -3.55368 | gap 1, opp_overlap 476906, overlap 476913 ATGTAACTGACATAA TGCGCCGCATCGAGCAGCGG TACCC CCGCTGC-CGTTGAGGCGCT ACTGGGCATTTTAGC TERM 510 476954 - 476913 - G 100 -18 -2.72739 | gap 1, opp_overlap 476906, overlap 476912 TGTAACTGACATAAT GCGCCGCATCGAGCAGCGG TACCC CCGCTGC-CGTTGAGGCGC TACTGGGCATTTTAG TERM 511 477912 - 477898 - R 100 -11.4 -5.49234 | opp_overlap 477898 ATAGTGAATAAAAAA GCCAGC TTA GCTGGC TTTCTTGGCTGAACA TERM 512 477898 - 477912 + r 93 -11.4 -4.20516 | opp_overlap 477898 ATAGTGAATAAAAAA GCCAGC TTA GCTGGC TTTCTTGGCTGAACA Shew185_0421 478419 - 477934 - | ribonuclease activity regulator protein RraA Shew185_0422 478738 - 478992 + | uroporphyrinogen decarboxylase TERM 513 479394 - 479375 - f 89 -10 -4.28018 | AACATCGCAGTAAAA CTCGCTGG CATG CCAGCAAG GAGCCTGTTTTATGT Shew185_0423 479406 - 479918 + | phosphoesterase PA-phosphatase related Shew185_0424 479994 - 481034 + | hypothetical protein TERM 514 481198 - 481212 + G 74 -4.3 -4.93316 | CTGAAAAAGTTTACC CAGTA CAAGT TACTG TTTTTAATGTTGTTG Shew185_0425 481177 - 482643 + | hypothetical protein Shew185_0427 483669 - 483055 - | SNARE associated Golgi protein TERM 515 483828 - 483846 + r 100 -14.6 -3.28416 | opp_overlap 483828 CTGAAATATAAAAAA GGCCGAAC TCA GTTCGGCC TTAATGTCAGTACTG TERM 516 483846 - 483828 - R 100 -14.6 -5.56264 | opp_overlap 483828 CTGAAATATAAAAAA GGCCGAAC TCA GTTCGGCC TTAATGTCAGTACTG Shew185_0428 484799 - 483879 - | putative manganese-dependent inorganic pyrophosphatase TERM 517 484606 - 484618 + g 100 -9.1 -4.67608 | opp_overlap 484594, overlap 484601 ATATACACTTGCTCG CCAGC GTA GCTGG TTTTGTATTCCGGTG Shew185_0429 485404 - 484943 - | hypothetical protein TERM 518 485523 - 485489 - R 100 -16 -2.90219 | opp_overlap 485489 485497, overlap 485497 CATAAGCTTTAGACA TAAAAAAACAGGCCAT TGC ATGGCCTGTTTTTATA TTAAATGTCACTTTG TERM 519 485489 - 485523 + r 100 -16 -3.15236 | opp_overlap 485489 485497, overlap 485497 CATAAGCTTTAGACA TAAAAAAACAGGCCAT TGC ATGGCCTGTTTTTATA TTAAATGTCACTTTG TERM 520 485515 - 485497 - R 100 -13.2 -5.76633 | opp_overlap 485489 485497, overlap 485489 TTAGACATAAAAAAA CAGGCCAT TGC ATGGCCTG TTTTTATATTAAATG TERM 521 485497 - 485515 + r 100 -13.2 -5.10767 | opp_overlap 485497 485489, overlap 485489 TTAGACATAAAAAAA CAGGCCAT TGC ATGGCCTG TTTTTATATTAAATG Shew185_0430 487967 - 485574 - | TonB-dependent receptor TERM 522 485931 - 485943 + g 77 -6.3 -4.65895 | GCGAGTTTGTTCTAT GCTAT CGA ATAGC TTTTTGCCTAACCCA TERM 523 486725 - 486744 + g 71 -7.2 -4.07568 | gap 1, overlap 486711 ATGAACCCGTTTCGC CGGCT-TCA ATT TGATAGCCG TTTTGGCGCCACGAC TERM 524 488187 - 488234 + H 100 -19.4 -2.68821 | opp_overlap 488191 488196, overlap 488196 GCTTTGAGTGTTTTG AAGACTTAACTCGCTCGCTATA TATT TATGGCGAGCGAGTTAAGTCAA TGATATGAATTGTTT TERM 525 488230 - 488191 - H 100 -21 -3.02144 | opp_overlap 488187 488196, overlap 488196 TGAGTGTTTTGAAGA CTTAACTCGCTCGCTATA TATT TATGGCGAGCGAGTTAAG TCAATGATATGAATT TERM 526 488196 - 488225 + H 100 -17.3 -3.08642 | opp_overlap 488191 488196, overlap 488187 GTTTTGAAGACTTAA CTCGCTCGCTATA TATT TATGGCGAGCGAG TTAAGTCAATGATAT TERM 527 488225 - 488196 - H 100 -15.1 -3.1855 | opp_overlap 488196 488187, overlap 488191 GTTTTGAAGACTTAA CTCGCTCGCTATA TATT TATGGCGAGCGAG TTAAGTCAATGATAT TERM 528 488583 - 488555 - g 70 -9.5 -3.13403 | opp_overlap 488555 488557, overlap 488553 TTTGGCGCAGCAAGA TCCCCTAGCAGCC TAT GGCCGCTTAGAGA ATTTTTATATTGGTC Shew185_0431 488319 - 489374 + | hypothetical protein TERM 529 489457 - 489468 + F 76 -4.4 -5.05153 | CCTGATTTAGCCTAG TTGG GTCG CCAA TTTATTTTTTGCACT Shew185_0432 489590 - 490165 + | ATP-dependent protease La TERM 530 490206 - 490189 - f 70 -8.4 -3.28323 | opp_overlap 490189, overlap 490180 490187 AAAAAGGCTAGAATA GCGGCT TTCTAT AGCCGC TTTTTTTGTGATATG TERM 531 490189 - 490206 + F 100 -8.4 -5.69473 | opp_overlap 490180 490189 490187 AAAAAGGCTAGAATA GCGGCT TTCTAT AGCCGC TTTTTTTGTGATATG Shew185_0433 490219 - 491136 + | pseudouridine synthase Shew185_0434 491284 - 491673 + | hypothetical protein Shew185_0435 493564 - 491678 - | hypothetical protein TERM 532 493245 - 493268 + g 73 -10.4 -3.17392 | gap 1, opp_overlap 493243 493240 493239, overlap 493247 GGGGTAAAACGCACA CT-TGGCGATG AGG CATCGCCATAG TTCAGTTGGCAGATG TERM 533 493247 - 493265 + g 85 -13.2 -2.78712 | opp_overlap 493243 493240 493239, overlap 493245 GGTAAAACGCACACT TGGCGATG AGG CATCGCCA TAGTTCAGTTGGCAG Shew185_0436 493707 - 494621 + | dTDP-4-dehydrorhamnose reductase Shew185_0437 494630 - 495940 + | integral membrane sensor signal transduction histidine kinase Shew185_0438 495937 - 496488 + | two component Fis family transcriptional regulator TERM 534 496619 - 496594 - T 100 -9.8 -5.24129 | TTTGCGCATAAAAAA TGCCACTCAA AAAAGG CTGAGTGGCA TTAACAAGAAACGAG Shew185_0439 499035 - 496699 - | peptidase M4 thermolysin TERM 535 498843 - 498858 + g 85 -5.4 -5.28826 | overlap 498853 GTTGCTTTTGCTTGC CTTGAC CTAG GTCGAG TTTTTTCTCGACTTT TERM 536 498977 - 498957 - G 73 -9.8 -3.39327 | TGCCGACATCGACAA CATCAGCA GCAAA TGCTGATG TGCCTAACGTGGCCG TERM 537 499561 - 499551 - R 73 -5.4 -4.60041 | overlap 499552 ATTCATTTTGAAAAA TGCA CTT TGCA AGAGCCATTTGAAAG Shew185_0440 500355 - 499648 - | C factor cell-cell signaling protein Shew185_0441 501946 - 500369 - | deoxyribodipyrimidine photolyase-related protein TERM 538 500545 - 500560 + g 78 -6 -4.75289 | opp_overlap 500534 500545, overlap 500547 TGAACGGGCAGGCAA GTGCGC CGCT GCGCTC TTTTATCTTGTAATG TERM 539 500547 - 500558 + g 71 -7.2 -3.98053 | opp_overlap 500534 500545, overlap 500545 AACGGGCAGGCAAGT GCGC CGCT GCGC TCTTTTATCTTGTAA TERM 540 501393 - 501403 + g 71 -4.6 -4.56736 | TCAAAGTTCCATTGT CCGC CGA GTGG TTTTCCTTCTTGCAT TERM 541 502142 - 502120 - H 71 -7.6 -3.87583 | overlap 502114 AAAGCCAAAGTCAAA GTCGTGGGGC TTC ACCCCACACC CGACCAAGGAGGACT TERM 542 502307 - 502281 - H 72 -8.7 -3.53012 | opp_overlap 502281 502298 502300, overlap 502250 502249 502285 CCCTTCCCCCCGAAA GCTACGCAGAC GTCCT GTCTGCGTCAC GCGATTTTCTTCAAC TERM 543 502303 - 502285 - H 72 -10.3 -2.64155 | opp_overlap 502281 502298 502300, overlap 502281 TCCCCCCGAAAGCTA CGCAGAC GTCCT GTCTGCG TCACGCGATTTTCTT Shew185_0442 502830 - 504680 + | hypothetical protein Shew185_0443 505781 - 504672 - | transposase IS4 family protein TERM 544 505864 - 505851 - R 74 -3.7 -5.02074 | opp_overlap 505851 TCATTTTTTAAAAAA GTGCG ATCT CGCCC TGTCTGCCAGACTGT Shew185_0444 506160 - 506047 - | hypothetical protein Shew185_0445 507053 - 506667 - | hypothetical protein TERM 545 507213 - 507253 + r 100 -18.4 -4.13767 | overlap 507214 TTTTACATTTGAGTC GCCGTTCACCGCCAAGTC GTTTG GGTTTGGCGGTGAACGGG TTTTGCACTAGAGGA TERM 546 507214 - 507252 + r 100 -21.9 -3.08046 | overlap 507213 TTTACATTTGAGTCG CCGTTCACCGCCAAGTC GTTTG GGTTTGGCGGTGAACGG GTTTTGCACTAGAGG Shew185_0446 508589 - 507261 - | ATP-dependent protease ATP-binding subunit Shew185_0447 509133 - 508609 - | ATP-dependent protease peptidase subunit Shew185_0448 509858 - 509283 - | hypothetical protein TERM 547 509731 - 509695 - G 73 -10.2 -3.14126 | gap 1, opp_overlap 509708 TGATAAAGCTTAACA CCAGAGGCAAAGGCCGC AAAT GCGGT-TTTGGCTCTGG CATCGTGGGCATCTT TERM 548 509708 - 509719 + g 73 -7.2 -4.23758 | opp_overlap 509695 CACCAGAGGCAAAGG CCGC AAAT GCGG TTTTGGCTCTGGCAT TERM 549 510035 - 510049 + r 91 -10 -4.60797 | opp_overlap 510035, overlap 510023 TCTGCCGAATGTAAA CGGCTT ATA AAGCCG TTTTGTCTATAACAC TERM 550 510049 - 510035 - R 80 -10 -3.75153 | opp_overlap 510023 510035 TCTGCCGAATGTAAA CGGCTT ATA AAGCCG TTTTGTCTATAACAC Shew185_0449 510590 - 510039 - | deaminase-reductase domain-containing protein Shew185_0450 510893 - 510606 - | hypothetical protein TERM 551 511046 - 511019 - R 90 -7.6 -5.24129 | overlap 511020 511021 GGGTGGGATAAAAAA TCCCCGAGGGCA TAGT TACCCTCGGGTG GAGGTTCAAAAAGCA TERM 552 511045 - 511020 - R 83 -11.1 -3.73995 | overlap 511019 511021 GGTGGGATAAAAAAT CCCCGAGGGCA TAGT TACCCTCGGGT GGAGGTTCAAAAAGC TERM 553 511044 - 511021 - R 95 -14.6 -2.83915 | overlap 511020 511019 GTGGGATAAAAAATC CCCGAGGGCA TAGT TACCCTCGGG TGGAGGTTCAAAAAG TERM 554 511173 - 511148 - R 73 -7.7 -3.93262 | gap 1, overlap 511156 TTTAACAAAGCCAAA TGC-ACAAACTG CGA CAGCTTGTCGCA GGCAGGATGAAAACT TERM 555 511174 - 511156 - R 100 -13.2 -4.02534 | overlap 511148 AGCCAAATGCACAAA CTGCGACA GCT TGTCGCAG GCAGGATGAAAACTG Shew185_0451 511898 - 511296 - | response regulator receiver protein TERM 556 511629 - 511596 - G 75 -3.7 -5.00884 | gap 1, overlap 511598 511617 AGGTTTTTGAAAAAA GTCGCAG-GCTCCCTT ACG AAAGGCGCTCAGCGCC ATAGGTAAGTCGCCG TERM 557 511629 - 511617 - G 79 -10.5 -3.72576 | overlap 511598 511596 GGCTCCCTTACGAAA GGCGC TCA GCGCC ATAGGTAAGTCGCCG Shew185_0452 512105 - 513916 + | histidine kinase Shew185_0453 514835 - 513924 - | LysR family transcriptional regulator Shew185_0454 514947 - 516083 + | NADH:flavin oxidoreductase/NADH oxidase Shew185_0455 516083 - 516721 + | hypothetical protein Shew185_0456 516718 - 517710 + | polysaccharide deacetylase TERM 558 517771 - 517802 + T 86 -10.2 -4.10007 | opp_overlap 517772 517778, overlap 517772 517776 517778 AGGTTTGAATGATTA ACAAAAAGCGCGTT GTAT AACGCGCTGTTTGA TTTTGGGAACCTTAT TERM 559 517801 - 517772 - T 95 -13.7 -3.27298 | opp_overlap 517771 517772 517776 517778, overlap 517778 GGTTTGAATGATTAA CAAAAAGCGCGTT GTAT AACGCGCTGTTTG ATTTTGGGAACCTTA TERM 560 517772 - 517801 + T 93 -13.7 -3.05522 | opp_overlap 517772 517778, overlap 517771 517776 517778 GGTTTGAATGATTAA CAAAAAGCGCGTT GTAT AACGCGCTGTTTG ATTTTGGGAACCTTA TERM 561 517776 - 517797 + T 82 -8.7 -4.19735 | opp_overlap 517772 517778, overlap 517772 517771 517778 TGAATGATTAACAAA AAGCGCGTT GTAT AACGCGCTG TTTGATTTTGGGAAC TERM 562 517778 - 517795 + T 88 -11.3 -3.695 | opp_overlap 517772 517778, overlap 517776 517772 517771 AATGATTAACAAAAA GCGCGTT GTAT AACGCGC TGTTTGATTTTGGGA TERM 563 517795 - 517778 - T 95 -11.3 -5.16071 | opp_overlap 517778 517776 517772 517771, overlap 517772 AATGATTAACAAAAA GCGCGTT GTAT AACGCGC TGTTTGATTTTGGGA Shew185_0457 518997 - 517837 - | sulphate transporter TERM 564 518927 - 518906 - G 76 -2.1 -5.22943 | overlap 518907 ACTAAAGGTAAAAAA GTGCCCAAG TCGG CAAAGGCAC CACTGGTTTCACCGA TERM 565 519210 - 519184 - R 100 -16.8 -5.36965 | CAACATCATAAAAAA GAGATCTTAGTG AAG CACTAAGATCTC AAAGGGTATTGCAGG Shew185_0458 520625 - 519237 - | cytochrome c, putative TERM 566 520283 - 520314 + g 73 -8.2 -3.81488 | opp_overlap 520282 GGCAGACAAGGCAAT CGACTTTAGTTTTA TCTT TAAAATCAAAGTCG TTATCTTTCCAGCCG Shew185_0459 522405 - 520681 - | hypothetical protein TERM 567 521420 - 521444 + g 78 -11.5 -3.01712 | opp_overlap 521419 521420 GTGAATTGCAGGAAG TTGGTGCCATC GTT GATGGCATCGA TATTAAAACCGCCGA Shew185_0460 522928 - 522599 - | cytochrome c family protein TERM 568 523084 - 523074 - R 71 -4 -4.91712 | opp_overlap 523065 TCTAATTGATAAAAA TATC ATT GATA AAAATCTAATTGACT TERM 569 523105 - 523122 + r 76 -3.5 -5.30616 | gap 1 CTAATTGACTGTGTT TTGTAGTG GTT CACT-CAA TTTTTATTTCAGTAA Shew185_0461 524198 - 523425 - | hypothetical protein TERM 570 523798 - 523783 - G 75 -5.4 -4.8048 | gap 1 TGCGGACAGTAAAAA GCGC-CT CTA AGTGCGC CAATGATGTAAGGCT TERM 571 524373 - 524400 + r 74 -6.3 -4.3898 | opp_overlap 524373, overlap 524367 ATTTTATCACTAAAA GGTTTGGCTTA TTTCAT TTGGCCAAACC TTTTCTGGGACTCAT Shew185_0462 525970 - 524435 - | Sel1 domain-containing protein TERM 572 524959 - 524974 + g 70 -7.6 -3.84715 | CTTTAATCGGCTGGC GGCTTA CGCC TAAGCC TTGTTCATGTATTTT Shew185_0463 526924 - 526088 - | MscS mechanosensitive ion channel TERM 573 526832 - 526814 - G 75 -5.2 -4.74801 | CAACCCCAGTAAAAA GATCAGCA AAG CGCCGACC AATTGGAAGCTATAG TERM 574 527306 - 527287 - g 73 -7.9 -4.00756 | GATGTGATTAAAGAA GCACTCA CGCCTC TGAGTGC GACTCAAATGCCTAA Shew185_0464 527095 - 527574 + | hypothetical protein Shew185_0465 527951 - 529126 + | diaminopimelate decarboxylase TERM 575 529146 - 529167 + T 90 -12.3 -3.67597 | opp_overlap 529149, overlap 529149 TTGTGGTGACATGAA TAAGGGCGC TTAG GCGCCCTTG TTGTTCGCTAAAGAA TERM 576 529164 - 529149 - T 89 -11.8 -3.7732 | opp_overlap 529146 529149 TGGTGACATGAATAA GGGCGC TTAG GCGCCC TTGTTGTTCGCTAAA TERM 577 529149 - 529164 + T 91 -11.8 -3.97307 | opp_overlap 529149, overlap 529146 TGGTGACATGAATAA GGGCGC TTAG GCGCCC TTGTTGTTCGCTAAA Shew185_0466 529403 - 529191 - | hypothetical protein Shew185_0467 529817 - 530575 + | uridine phosphorylase TERM 578 530651 - 530622 - T 95 -13.1 -3.76968 | gap 1, opp_overlap 530623 530630, overlap 530623 530630 AAGTGAGTGACCAAA CTAAAAAAGGTGCC AAT GGCACCTTTTTT-G TTACTTCAAAATTGT TERM 579 530623 - 530651 + T 100 -15.5 -3.36135 | opp_overlap 530622 530623 530630, overlap 530630 AGTGAGTGACCAAAC TAAAAAAGGTGCC AAT GGCACCTTTTTTG TTACTTCAAAATTGT TERM 580 530651 - 530623 - T 90 -13.3 -2.85699 | opp_overlap 530623 530630, overlap 530622 530630 AGTGAGTGACCAAAC TAAAAAAGGTGCC AAT GGCACCTTTTTTG TTACTTCAAAATTGT TERM 581 530644 - 530630 - T 100 -11.4 -5.40004 | opp_overlap 530623 530630, overlap 530622 530623 GACCAAACTAAAAAA GGTGCC AAT GGCACC TTTTTTGTTACTTCA TERM 582 530630 - 530644 + T 100 -11.4 -5.5604 | opp_overlap 530630 530622 530623, overlap 530623 GACCAAACTAAAAAA GGTGCC AAT GGCACC TTTTTTGTTACTTCA Shew185_0468 531430 - 530678 - | hypothetical protein Shew185_0469 531906 - 532376 + | hypothetical protein Shew185_0470 532389 - 533324 + | band 7 protein Shew185_0471 533324 - 534262 + | band 7 protein TERM 583 534297 - 534326 + T 100 -13.1 -5.03715 | opp_overlap 534300 AATTAGCTAGTTTAT TAAGGTCAAATAC TTAG GTATTTGGCCTTA TTTTTTGGCGGTAAT Shew185_0472 534686 - 534462 - | hypothetical protein TERM 584 534968 - 534996 + r 100 -8.8 -5.64274 | opp_overlap 534968 AGCGGATAAAAAAAA TAGCGACGAGCG ATAAA CGCTGGCCGCTA TTTTTTTGTGACTAG TERM 585 534996 - 534968 - R 100 -11 -5.94713 | opp_overlap 534968 AGCGGATAAAAAAAA TAGCGACGAGCG ATAAA CGCTGGCCGCTA TTTTTTTGTGACTAG Shew185_0473 535761 - 535045 - | sporulation domain-containing protein Shew185_0474 537510 - 535765 - | arginyl-tRNA synthetase TERM 586 536027 - 536042 + g 73 -3.2 -4.88407 | AGGTCTTTCTCTTTT TCATGC TCAA GCACGA TTTTTGCTTGGCTCA TERM 587 536255 - 536266 + g 71 -4.4 -4.72272 | GTCAGCGTGACTTCA TCCA TATC TGGA TTTTTACTGCGAACG TERM 588 537094 - 537116 + g 90 -10.6 -4.41616 | GTCACCAATGATGGT TGAACGTAGG TGA CCTACGTGCA TTTCTTTGGCGAGGT TERM 589 537640 - 537656 + r 77 -10.9 -2.89881 | opp_overlap 537642, overlap 537642 ATACTCGACTCAGAG GAGATCC TGC GGATCTC TGTCTAAGCTCCATC Shew185_0475 539829 - 537634 - | primosomal protein N' TERM 590 537765 - 537786 + g 79 -2.2 -5.36441 | TCGCTTGGAATAGCA GTTGGCGA CGGAAC TTGCCGGC TTTTTTATCTAAGGG Shew185_0476 539932 - 540981 + | hypothetical protein Shew185_0477 541163 - 541375 + | 50S ribosomal protein L31 TERM 591 541401 - 541415 + F 100 -12.8 -5.07011 | opp_overlap 541401 AATATTTCTAGAAAA GGCGCC TAT GGCGCC TTTTTGCTTTCTATC TERM 592 541415 - 541401 - f 100 -12.8 -4.39828 | opp_overlap 541401 AATATTTCTAGAAAA GGCGCC TAT GGCGCC TTTTTGCTTTCTATC Shew185_0478 541912 - 543156 + | malate dehydrogenase TERM 593 543198 - 543183 - f 86 -9 -4.37991 | opp_overlap 543183 TAAAAACATCGAAAA GAGGCT AATT AGCCTC TTTTTTGTTTTTAAG TERM 594 543183 - 543198 + F 100 -9 -5.93252 | opp_overlap 543183 TAAAAACATCGAAAA GAGGCT AATT AGCCTC TTTTTTGTTTTTAAG TERM 595 543390 - 543372 - g 75 -6.1 -4.54821 | opp_overlap 543372 543376 ATGTTAACTACAAAA TTAACCA GCTTT TGGTTAA TGTCATTAGCCGCTA TERM 596 544090 - 544104 + G 85 -7.8 -4.67607 | opp_overlap 544082 544079 ATAATCAGGCGATGC TCGCCC ATG GGGTGA TTTATTTATTAGAGA Shew185_0479 543342 - 545285 + | regulatory protein CsrD Shew185_0480 545531 - 546409 + | biogenesis protein MshI Shew185_0481 546406 - 547008 + | hypothetical protein Shew185_0482 547005 - 547655 + | MSHA biogenesis protein MshJ Shew185_0483 547642 - 547962 + | MSHA biogenesis protein MshK Shew185_0484 547977 - 549656 + | pilus (MSHA type) biogenesis protein MshL Shew185_0485 549663 - 550571 + | MSHA biogenesis protein MshM Shew185_0486 550568 - 551905 + | TPR repeat-containing protein Shew185_0487 551902 - 553662 + | type II secretion system protein E Shew185_0488 553665 - 554885 + | type II secretion system protein TERM 597 555400 - 555410 + G 81 -3.2 -5.47218 | overlap 555397 CTATCAACTGAACTC TGGC AGG GTCA TTTTTTTGACTGCAC Shew185_0489 554936 - 555430 + | hypothetical protein Shew185_0490 555506 - 556123 + | MSHA pilin protein MshB TERM 598 556125 - 556137 + F 76 -3.4 -5.28831 | opp_overlap 556125 CATTTGTGCCATAAG CTGT AATTA ACAG TTTTATTTTGTTCAT Shew185_0491 556235 - 556795 + | methylation site containing protein TERM 599 556828 - 556812 - f 100 -13.7 -4.23892 | opp_overlap 556812 TTTAATTACGGAAAA GGCCTGC CTA GCAGGCC TTTTTTTTAGGTAAA TERM 600 556812 - 556828 + F 100 -13.7 -5.81412 | opp_overlap 556812 TTTAATTACGGAAAA GGCCTGC CTA GCAGGCC TTTTTTTTAGGTAAA TERM 601 557216 - 557233 + G 72 -6.2 -4.36554 | AAGTGAGTCAATTCT CTGCCC GAAATG GGGCGG TTTGTTCTGGTACTG Shew185_0492 556981 - 557463 + | methylation site containing protein Shew185_0493 557453 - 558007 + | MSHA pilin protein MshD Shew185_0494 558007 - 558855 + | MSHA biogenesis protein MshO Shew185_0495 558845 - 559324 + | MSHA biogenesis protein MshP TERM 602 562946 - 562957 + G 71 -4.4 -4.7497 | GCCGCCCGCGAGTTA CTTG GGAT CAAG TTTTTACTCAATACC Shew185_0496 559314 - 563945 + | hypothetical protein TERM 603 564126 - 564148 + F 77 -5 -5.00616 | opp_overlap 564126 ATTTTCGTCAATAAA CAGTATTT TCCGCTT AAATACTG TTTTTTAGAGGACGA TERM 604 564190 - 564176 - f 84 -2.1 -5.78622 | CGATTTGAAAAAAAA TCACT TCATT AGCGA TTGTTAACCTCCTCG TERM 605 564461 - 564439 - g 73 -8.5 -3.85698 | gap 1 GGCTCCGGTCAGAAA TCTGTTGCCG CGGT CGGCA-CAGA AGCTAAACAAATGCT Shew185_0497 564286 - 565335 + | cell shape determining protein MreB TERM 606 565352 - 565368 + F 75 -9.4 -3.32159 | overlap 565346 TTAACTTCGGTATAG GGCGGT TAATC ACCGCC TTAGCTTTCCTATGA Shew185_0498 565380 - 566390 + | rod shape-determining protein MreC TERM 607 566441 - 566463 + G 74 -9.9 -3.56821 | GTGACATTATTTATC GGCGTGATC AGCCA GATCATGCC TTTGCCGAGTGTGGT Shew185_0499 566387 - 566875 + | rod shape-determining protein MreD TERM 608 566938 - 566952 + G 73 -3.5 -4.86731 | overlap 566935 TTGGCACACATTGGA CTCGG TCGTC CTGAG TTTTGTTTCACGCAA TERM 609 567058 - 567046 - g 73 -5.5 -4.57569 | TTAGCCGCCGAAAAA GCCCA TGC TGGAC TGGCATTATGCGCAG Shew185_0500 566878 - 567480 + | maf protein Shew185_0501 567668 - 569176 + | ribonuclease G TERM 610 570451 - 570464 + GF 76 -2.4 -5.27335 | opp_overlap 570453 AACTTACATTGGCAA GACA AGACGC TGTC TTTTTCTTTGCCAGC TERM 611 570999 - 570987 - gf 70 -9.1 -3.1886 | opp_overlap 570987 AGGCAAGCTGATGAA CGTGG ATG CCACG GGTGCCCATGTATTT Shew185_0502 569176 - 573501 + | hypothetical protein Shew185_0503 573425 - 574255 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 612 574275 - 574256 - f 93 -12.8 -3.94 | CCAAGCTTGAAATAA CCGCCCGC ACTG GCGAGCGG CAATACCGAATTAGA Shew185_0504 574369 - 575817 + | peptidase U62 modulator of DNA gyrase Shew185_0505 576041 - 577510 + | outer membrane efflux protein Shew185_0506 577500 - 578474 + | secretion protein HlyD family protein TERM 613 579292 - 579304 + G 80 -6.9 -4.72188 | TACGCCGATATTGAT GCTGC AGG GCGGC TTTATTTTAGCTTGG TERM 614 579338 - 579354 + G 71 -9.4 -3.61328 | TACTTGTATCTCGCG CTGCCG ATGGC CGGCAG TTTAGCCCTATTGCT Shew185_0507 578480 - 579772 + | ABC-2 type transporter TERM 615 580456 - 580469 + G 78 -8.1 -4.31904 | TACAACTCTTATGTG GGCGA ATAC TCGCC TTTATGTTGATTTAT Shew185_0508 579774 - 580919 + | ABC-2 type transporter TERM 616 581187 - 581161 - f 70 -3.6 -5.00616 | opp_overlap 581161 581164, overlap 581163 TGCGCGCCGAAAAAA TGGCCGAGGTAC TCA GTATCTCGGTTA TTTTTATTTAGAGCG TERM 617 581161 - 581187 + F 100 -10.2 -5.27335 | opp_overlap 581161 581163, overlap 581164 TGCGCGCCGAAAAAA TGGCCGAGGTAC TCA GTATCTCGGTTA TTTTTATTTAGAGCG TERM 618 581164 - 581184 + F 100 -11.9 -4.72696 | opp_overlap 581163 581161, overlap 581161 GCGCCGAAAAAATGG CCGAGGTAC TCA GTATCTCGG TTATTTTTATTTAGA TERM 619 581589 - 581604 + G 73 -3.2 -4.87133 | GCTACGTCTTATCTA TTCGCG CTGG CGGGAA TTTTGTTTACCGCGT TERM 620 582019 - 582045 + G 73 -3.7 -5.00027 | overlap 582014 582013 CCGATAATATGGCGA TAGTGCCGTTA TTTAC TGGCGCCACTA TTTTGTGTTTTTCCT Shew185_0509 581439 - 582770 + | amino acid permease-associated region TERM 621 582897 - 582855 - T 91 -12.9 -2.93853 | gap 1, opp_overlap 582861 582862 582868, overlap 582819 582868 GCCTTCTAATCAAAC GCCCAATTGAAAAGACCCGC ATTC GCGGGTCTTTTCAGTTT-GC TTAATCGAGTTTTAA TERM 622 582861 - 582892 + T 100 -18.2 -3.95852 | opp_overlap 582855 582868, overlap 582862 582868 TAATCAAACGCCCAA TTGAAAAGACCCGC ATTC GCGGGTCTTTTCAG TTTGCTTAATCGAGT TERM 623 582862 - 582891 + T 100 -19.5 -2.97029 | opp_overlap 582855 582868, overlap 582861 582868 AATCAAACGCCCAAT TGAAAAGACCCGC ATTC GCGGGTCTTTTCA GTTTGCTTAATCGAG TERM 624 582885 - 582868 - T 100 -12.7 -4.27584 | opp_overlap 582862 582861 582868, overlap 582855 ACGCCCAATTGAAAA GACCCGC ATTC GCGGGTC TTTTCAGTTTGCTTA TERM 625 582868 - 582885 + T 100 -12.7 -4.39318 | opp_overlap 582868 582855, overlap 582862 582861 ACGCCCAATTGAAAA GACCCGC ATTC GCGGGTC TTTTCAGTTTGCTTA Shew185_0510 585419 - 582909 - | Ig domain-containing protein TERM 626 582935 - 582951 + g 73 -5.1 -4.63542 | opp_overlap 582936, overlap 582936 GCACTGTGAAACCTA AGTTGTC AGT GACAACA TTTTTAGGGGTTGTG TERM 627 585076 - 585113 + g 70 -8 -3.94184 | gap 1, opp_overlap 585081 AGTAAATCAGGATTA CTAAC-GATAATAATGG CTTCA CCGTTATTGTCTGTTAG TTTGCTATTAGGTGT Shew185_0511 585985 - 585449 - | hypothetical protein Shew185_0512 586150 - 587535 + | peptidase U62 modulator of DNA gyrase TERM 628 587636 - 587668 + T 100 -14.4 -5.29846 | gap 1, opp_overlap 587636 TTTGAGCATAAAAAA GGGCAAGC-GATTAA TCAC TTAATCTGCTTGCCC TTTTTGTTTAACGTT TERM 629 587668 - 587636 - T 100 -14.4 -5.31275 | gap 1, opp_overlap 587636 TTTGAGCATAAAAAA GGGCAAGC-GATTAA TCAC TTAATCTGCTTGCCC TTTTTGTTTAACGTT Shew185_0513 589919 - 587778 - | TonB-dependent receptor TERM 630 588992 - 589006 + g 93 -7.8 -5.26316 | overlap 588993 CACCTTCAGTGTTCA TCGGCA TCT TGCCGG TTTTTTCTGGGGTGA TERM 631 588993 - 589005 + g 74 -9.1 -3.75067 | overlap 588992 ACCTTCAGTGTTCAT CGGCA TCT TGCCG GTTTTTTCTGGGGTG Shew185_0514 591021 - 590173 - | hypothetical protein TERM 632 590335 - 590348 + g 79 -2.3 -5.40072 | AGGGTTGTGCCTACC GCGGT AGTG ACGGC TTTTTTTCGAGAAGC TERM 633 591233 - 591251 + H 83 -9.6 -3.90588 | GTTATAGTTTGCGCT GTTAGGCC ATG GGCTTAAC TTTCATTAAGCAGTG TERM 634 591475 - 591437 - g 90 -10.4 -4.4715 | gap 1, opp_overlap 591437 591443, overlap 591438 CCGTAAGGCACAAAA CCGAAAGGGGCATCAGC ATAAGG GC-GATGCCCCTTTTGA CTTTCTAGGTCTGCG TERM 635 591437 - 591475 + G 72 -10.4 -2.96722 | gap 1, opp_overlap 591437 591438, overlap 591443 CCGTAAGGCACAAAA CCGAAAGGGGCATCAGC ATAAGG GC-GATGCCCCTTTTGA CTTTCTAGGTCTGCG TERM 636 591474 - 591438 - g 82 -11.7 -3.27808 | gap 1, opp_overlap 591437 591443, overlap 591437 CGTAAGGCACAAAAC CGAAAGGGGCATCAGC ATAAGG GC-GATGCCCCTTTTG ACTTTCTAGGTCTGC TERM 637 591443 - 591469 + G 90 -10.2 -4.39571 | gap 1, opp_overlap 591438 591437, overlap 591437 GGCACAAAACCGAAA GGGGCATCAGC ATAAGG GC-GATGCCCC TTTTGACTTTCTAGG Shew185_0515 591276 - 591500 + | hypothetical protein Shew185_0516 591717 - 593120 + | fumarate hydratase, class II TERM 638 593329 - 593301 - T 100 -19.1 -5.42265 | opp_overlap 593307, overlap 593307 CGAAATGATAAAAAA CAAAAAGCGAACC AGA GGTTCGCTTTTTG AGTCATAGCCTGTCC TERM 639 593323 - 593307 - T 100 -12.3 -5.8096 | opp_overlap 593307, overlap 593301 GATAAAAAACAAAAA GCGAACC AGA GGTTCGC TTTTTGAGTCATAGC TERM 640 593307 - 593323 + T 100 -12.3 -4.68593 | opp_overlap 593307 593301 GATAAAAAACAAAAA GCGAACC AGA GGTTCGC TTTTTGAGTCATAGC Shew185_0517 594777 - 593359 - | MiaB-like tRNA modifying enzyme YliG TERM 641 595727 - 595714 - g 76 -2.3 -5.28942 | opp_overlap 595721 GATGCCAAACAAAAA GCCGA GTCT TTGGC TAAAGGTTTTGGGGA Shew185_0518 595195 - 595908 + | hypothetical protein TERM 642 595931 - 595959 + F 93 -5.4 -5.69262 | gap 1, opp_overlap 595940 ATCAGCATGTGACTA TGGATGAAGCTCC GATA GGAA-TTCATCCA TTTTTATTTTTCTGC Shew185_0519 596115 - 596888 + | diguanylate phosphodiesterase TERM 643 596974 - 597003 + F 78 -10.8 -3.01912 | gap 1, opp_overlap 596970 596974 596972, overlap 596976 TATCTAATTAACAGA CACTTGCCTGCAC GTTAA GTGC-GGCGAGTG TGTCTGTGCCTGTCA Shew185_0520 597168 - 597629 + | hypothetical protein TERM 644 598267 - 598291 + G 75 -3.5 -5.07652 | TATCGCCAGTGTGCA CAGTGCGCT CAATGAC GGCGGACTG TTTTGTTTTAACACG Shew185_0521 597884 - 598741 + | methyltransferase type 11 TERM 645 598874 - 598844 - f 70 -5.5 -4.40221 | gap 2, overlap 598848 AAACCAAAGTCAAAA TCAAGGTCGTGGGGC TTC ACCCCAC-ACC-CGA CAAAAAGGGGAAAAA TERM 646 598872 - 598848 - f 79 -9.9 -3.73399 | overlap 598844 CAAAGTCAAAATCAA GGTCGTGGGGC TTC ACCCCACACCC GACAAAAAGGGGAAA TERM 647 598901 - 598881 - f 82 -6.1 -4.8667 | opp_overlap 598881 CACACCCGACAAAAA GGGGAAAAA CGC CTGTTCCCC TTTTGGAAATCCCCC TERM 648 599185 - 599159 - f 72 -8.7 -3.53012 | opp_overlap 599158 599157 599159, overlap 599163 GCCCCTTCCCCGAAA GCTACGCAGAC GTCCT GTCTGCGTCAC GCTATTTTCTTCAAC TERM 649 599181 - 599163 - f 72 -10.3 -2.64155 | opp_overlap 599158 599159 599157, overlap 599159 CTTCCCCGAAAGCTA CGCAGAC GTCCT GTCTGCG TCACGCTATTTTCTT Shew185_0522 599599 - 600294 + | hypothetical protein Shew185_0523 600753 - 601331 + | OmpA domain-containing protein TERM 650 601374 - 601398 + T 100 -14.4 -5.42131 | opp_overlap 601370 601367 AGTATTAATCATCTA GGTGTGACAC GCTAA GTGTCACACC TTTTTTATATGATTA Shew185_0524 602845 - 601937 - | transposase IS116/IS110/IS902 family protein Shew185_0525 604862 - 602874 - | hypothetical protein TERM 651 603903 - 603891 - G 71 -2.7 -4.87291 | TAGCGCAAGTAAAAA TAAAG CAT CTTCA ACAGAAATTTTTTCA TERM 652 604584 - 604608 + g 83 -8.8 -4.58724 | TGTAGATGATGGGTT GGATATTATT CTTAA AATAATATCC TTTTCGTTGTGTTTC TERM 653 604855 - 604865 + g 100 -4 -6.25578 | overlap 604830 604827 ACTTTGTCAGTCGAG TTAG GCA CTAA TTTTTTTTATTTGCT Shew185_0526 605196 - 604855 - | hypothetical protein TERM 654 605562 - 605587 + r 81 -11.9 -2.60496 | opp_overlap 605562 605568, overlap 605568 TGTGAATGACTTAAA CAAAAAGGCGC CTAA GCGCCTTTCTG CTCTTTGGGAAAGGG TERM 655 605587 - 605562 - R 100 -14.1 -3.71527 | opp_overlap 605562 605568, overlap 605568 TGTGAATGACTTAAA CAAAAAGGCGC CTAA GCGCCTTTCTG CTCTTTGGGAAAGGG TERM 656 605568 - 605581 + r 86 -9.5 -4.1043 | opp_overlap 605562 605568, overlap 605562 TGACTTAAACAAAAA GGCGC CTAA GCGCC TTTCTGCTCTTTGGG TERM 657 605581 - 605568 - R 100 -9.5 -5.30616 | opp_overlap 605568 605562, overlap 605562 TGACTTAAACAAAAA GGCGC CTAA GCGCC TTTCTGCTCTTTGGG Shew185_0527 606733 - 605630 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 658 606224 - 606250 + g 88 -8.8 -4.8543 | opp_overlap 606230 606232 TTTAGTCGATGGGGT GATTAACAGCTC AGG GAGCTTTTGATC TTTTTCTAAGCCTTC TERM 659 606421 - 606431 + g 76 -8.2 -4.07687 | CCAAAATATGGCTGT CGGC TAG GCCG TTTTCGGCGAACAGT Shew185_0528 607148 - 606720 - | hypothetical protein Shew185_0529 607227 - 607706 + | activator of Hsp90 ATPase 1 family protein TERM 660 607884 - 607898 + G 78 -9.2 -4.07885 | opp_overlap 607867, overlap 607885 TTGCGCCATTCCAAC TCGCGC AAA GCGCGG TTTTGCAGGGCAATA TERM 661 607885 - 607897 + G 72 -10.5 -3.04517 | opp_overlap 607867, overlap 607884 TGCGCCATTCCAACT CGCGC AAA GCGCG GTTTTGCAGGGCAAT Shew185_0530 607811 - 608488 + | pentapeptide repeat-containing protein TERM 662 608578 - 608602 + F 100 -12.1 -5.252 | TCAGTTTTCTTCTAA GCCGCCAGTAT CCA AAGCTGGCGGC TTTTTTCTGCCCGTA Shew185_0531 608899 - 611193 + | molybdopterin oxidoreductase Shew185_0532 611206 - 611772 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shew185_0533 611775 - 612722 + | polysulphide reductase NrfD TERM 663 612781 - 612753 - T 100 -13.3 -4.128 | opp_overlap 612758, overlap 612758 ATGTTGATAGATAAA GAAAAGCACTGAC AAT GTCAGTGCTTTTT TATTGCTTGAATCTT TERM 664 612758 - 612776 + T 100 -13.2 -5.5604 | opp_overlap 612753 612758 GATAGATAAAGAAAA GCACTGAC AAT GTCAGTGC TTTTTTATTGCTTGA TERM 665 612776 - 612758 - T 100 -13.2 -5.07523 | opp_overlap 612758, overlap 612753 GATAGATAAAGAAAA GCACTGAC AAT GTCAGTGC TTTTTTATTGCTTGA Shew185_0534 613569 - 612826 - | hypothetical protein TERM 666 613141 - 613117 - G 74 -10.7 -2.84745 | overlap 613113 613116 GCCTGACAATAGAAT CGCCATCGGCG GGC CACCAATAGCG GCAATATTACCGAAA TERM 667 613591 - 613608 + r 82 -11.3 -3.1372 | opp_overlap 613591, overlap 613589 CCATATAAACAAAAA GGGATCG TTAA CGATCCC TATTGATGAGCACTG TERM 668 613608 - 613591 - R 100 -11.3 -5.42975 | opp_overlap 613591 613589 CCATATAAACAAAAA GGGATCG TTAA CGATCCC TATTGATGAGCACTG Shew185_0535 613965 - 613651 - | transcriptional repressor protein MetJ TERM 669 614483 - 614494 + G 75 -5.8 -4.54253 | CCACGATTGTTACGG CGGT TCTT ACCG TTTATTTACTAATTT TERM 670 615101 - 615116 + G 71 -3.9 -4.66609 | GCTCAAAGGCGGTGA GGCCG AAGTGG TGGCC TTTTTAGGTGCACTC Shew185_0536 614178 - 615341 + | O-succinylhomoserine (thiol)-lyase TERM 671 615318 - 615331 + F 75 -9.5 -3.35679 | opp_overlap 615312 ATTCAAGCAGGATTA GCCGC CGTT GCGGC TTGTCAGTAGAGGAA TERM 672 615626 - 615608 - g 79 -9.5 -3.81146 | opp_overlap 615608 615607 TTGTCGAACGAACAA GCCCGCG ATCTG CGCGAGC GTTTGGCGACAGATC TERM 673 617314 - 617327 + G 75 -8.1 -4.17762 | GTCTGGTCGTGATAT GCAGC GTAA GCTGC TTATTTTGGCCCGTG Shew185_0537 615353 - 617746 + | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 674 617783 - 617768 - f 76 -9 -3.62275 | opp_overlap 617768 ATTCAGCAGCTTAAA GGACTC ATTC GAGTCC TTTTTTATTGGCTAG TERM 675 617768 - 617783 + F 95 -9 -5.4833 | opp_overlap 617768 ATTCAGCAGCTTAAA GGACTC ATTC GAGTCC TTTTTTATTGGCTAG Shew185_0538 617964 - 618851 + | 5,10-methylenetetrahydrofolate reductase TERM 676 618874 - 618902 + T 82 -11.8 -2.99273 | opp_overlap 618879, overlap 618879 ACAACATAAACTAAT AAAAACGCCGCA GATAA TGCGGCGTTTTG CTTTGTGGTAGTGGG TERM 677 618879 - 618897 + T 95 -11.7 -4.63479 | opp_overlap 618879, overlap 618874 ATAAACTAATAAAAA CGCCGCA GATAA TGCGGCG TTTTGCTTTGTGGTA TERM 678 618897 - 618879 - T 100 -11.7 -5.25906 | opp_overlap 618879 618874 ATAAACTAATAAAAA CGCCGCA GATAA TGCGGCG TTTTGCTTTGTGGTA Shew185_0539 620827 - 618926 - | methyl-accepting chemotaxis sensory transducer TERM 679 619515 - 619525 + g 77 -6.8 -4.62069 | opp_overlap 619509 619513 619514, overlap 619513 GCTAATACAGCAATC GTCG CGA CGAC TTTTTGCACTACGAG TERM 680 620296 - 620277 - G 73 -7.2 -4.17132 | gap 1 AAACTGTCGAAGAAA GGT-TGTCC AAA GGACATACC AAATTCCACTGAGCC Shew185_0540 621049 - 621522 + | MarR family transcriptional regulator TERM 681 621727 - 621739 + G 73 -5.5 -4.57581 | opp_overlap 621716 CGAACAACCAAGCGG TTGCC AAG GGCGA TTTGTTGTTTCAAGT Shew185_0541 621531 - 622589 + | secretion protein HlyD family protein Shew185_0542 622801 - 623829 + | response regulator receiver protein Shew185_0543 624057 - 624683 + | cytochrome c family protein TERM 682 625154 - 625178 + G 72 -10.8 -2.56596 | overlap 625150 TAGTGGCGCTTTCTG CCTATGCCTA TTGGT TAGGCATGGG TGGCTTGATGGACGA TERM 683 625269 - 625255 - g 74 -10 -3.5936 | GTCAAAGGTGCTAAA CGGGAA GAC TTCCCG CTACCTGAGATATTA Shew185_0544 624694 - 625761 + | cytochrome c class I TERM 684 625826 - 625851 + F 100 -9.8 -5.5112 | gap 1, opp_overlap 625826 AAGTTGGACAGAAAA GCCAGC-AAGC ATTTA GCTTTGCTGGC TTTTTTATTGGTCAA TERM 685 625851 - 625826 - f 91 -9.8 -4.53705 | gap 1, opp_overlap 625826 AAGTTGGACAGAAAA GCCAGC-AAGC ATTTA GCTTTGCTGGC TTTTTTATTGGTCAA TERM 686 625997 - 626024 + F 83 -12.6 -2.62616 | TCCATCCTTGGATGC TCGACCGCCCCG TCCA TGGGGCGGACGG TCGTCTCGCAAATCA Shew185_0545 626418 - 627305 + | hypothetical protein TERM 687 627754 - 627776 + F 71 -6.2 -4.18042 | ATCCCCTCTTGGTCG GGTGTGGGTT GAA GACCCACGAC TTTGATTTATCTCGG TERM 688 628172 - 628188 + G 75 -7.9 -4.16943 | overlap 628173 ATCAGATTCACTGCA AGGGGCT ATT AGCCCCA TTTTACCGTCTGCCG TERM 689 628173 - 628187 + G 79 -11.4 -3.09844 | overlap 628172 TCAGATTCACTGCAA GGGGCT ATT AGCCCC ATTTTACCGTCTGCC TERM 690 628308 - 628285 - g 100 -9.6 -5.1861 | opp_overlap 628285 CGCAGGATGAAAAAA GCCCATCG AGTGTGAG CGATGGGC TAGGTTATGAGGTGA Shew185_0546 627999 - 628328 + | hypothetical protein Shew185_0547 629445 - 628336 - | TonB family protein TERM 691 629641 - 629610 - R 81 -6.6 -4.80882 | opp_overlap 629610 629613 AGTTGAGATTAAAAA TAAGCGAGCCCAAT TGAA ATAGAGTTCGCTTA TTTATCAGTGCTTTA Shew185_0548 630496 - 629693 - | hydratase/decarboxylase family protein TERM 692 630422 - 630403 - G 71 -10.6 -2.87051 | opp_overlap 630402 630405, overlap 630402 CTGGGAGCAGTAAAT CGCCGCTG GTGC CTGCGGCG CGGCGCTCGGCGAGT Shew185_0549 630816 - 631790 + | hypothetical protein Shew185_0550 631822 - 632436 + | HAD family hydrolase Shew185_0551 632798 - 632433 - | hypothetical protein TERM 693 632751 - 632740 - G 81 -5.8 -4.96848 | overlap 632741 632742 TGTTGCAGATAAAAA TGGC CGCT GCCA GGGGCGACGAAGGCG TERM 694 633143 - 633116 - R 83 -12.2 -3.18274 | opp_overlap 633116 633123, overlap 633123 GCGATGTCAAGCCAA CAAAAAAGGAGC CTAG GCTCCTTTTTTA GTCTCTAGCTTAAGC TERM 695 633116 - 633144 + r 72 -9.8 -2.95091 | gap 1, opp_overlap 633116 633123, overlap 633123 GCGATGTCAAGCCAA C-AAAAAAGGAGC CTAG GCTCCTTTTTTAG TCTCTAGCTTAAGCT TERM 696 633136 - 633123 - R 93 -8.1 -5.5074 | opp_overlap 633116 633123, overlap 633116 CAAGCCAACAAAAAA GGAGC CTAG GCTCC TTTTTTAGTCTCTAG TERM 697 633123 - 633136 + r 91 -8.1 -5.24989 | opp_overlap 633123 633116, overlap 633116 CAAGCCAACAAAAAA GGAGC CTAG GCTCC TTTTTTAGTCTCTAG Shew185_0552 635085 - 633163 - | DEAD/DEAH box helicase domain-containing protein TERM 698 634014 - 634028 + g 74 -10 -3.56568 | TTGAACGCTCGATGG TGCGCA GCA TGCGCA TTTCACGGCTAGTTA Shew185_0553 636434 - 635280 - | peptidase M28 TERM 699 636556 - 636590 + r 70 -7.9 -3.72576 | gap 1, opp_overlap 636559 636562, overlap 636559 636562 TGGATTGCTGAGCGA AAAGAAGCGCAGT-GC TTAT GCGACTGCGCTTCTAC TTTACTCAGACCAAG TERM 700 636587 - 636559 - R 100 -14 -4.18197 | gap 1, opp_overlap 636556 636559 636562, overlap 636562 ATTGCTGAGCGAAAA GAAGCGCAGT-GC TTAT GCGACTGCGCTTC TACTTTACTCAGACC TERM 701 636559 - 636587 + r 93 -14 -2.96695 | gap 1, opp_overlap 636559 636562, overlap 636556 636562 ATTGCTGAGCGAAAA GAAGCGCAGT-GC TTAT GCGACTGCGCTTC TACTTTACTCAGACC TERM 702 636584 - 636562 - R 89 -9.9 -4.21812 | gap 1, opp_overlap 636559 636556 636562, overlap 636559 GCTGAGCGAAAAGAA GCGCAGT-GC TTAT GCGACTGCGC TTCTACTTTACTCAG TERM 703 636562 - 636584 + r 79 -9.9 -3.62849 | gap 1, opp_overlap 636562 636559, overlap 636559 636556 GCTGAGCGAAAAGAA GCGCAGT-GC TTAT GCGACTGCGC TTCTACTTTACTCAG Shew185_0554 639498 - 636616 - | excinuclease ABC, A subunit TERM 704 637812 - 637834 + g 70 -9.8 -3.18023 | overlap 637810 637813 GGCCGATGTCGATCA CGTGATCCGC CAT GCGGATCGCA TCTTCATCGTGCTCA TERM 705 637813 - 637833 + g 84 -13.3 -2.50492 | overlap 637812 637810 GCCGATGTCGATCAC GTGATCCGC CAT GCGGATCGC ATCTTCATCGTGCTC TERM 706 638721 - 638711 - G 71 -8.2 -3.67597 | TCTGCCATCGAATAA CCGC AGT GCGG ACAGGCGAAGTTGGC TERM 707 640110 - 640121 + G 75 -5.8 -4.52857 | opp_overlap 640110 AAGCTGTGCTGCAAA TCCC TATG GGGA TTTTATCTGACAAAT TERM 708 640263 - 640289 + G 78 -12.3 -2.71924 | gap 1, overlap 640262 GCATGGGCGCGATTG CCGCTGCC-GTG TTAG CACTGGCGGCGG ATTTAACCCGCGATG Shew185_0555 639914 - 641281 + | major facilitator transporter TERM 709 641645 - 641610 - g 83 -11.4 -3.55548 | gap 1, overlap 641600 GAATACCTGCGTAAA GGTTCACAGGTTTACCT TGA AGGTAAAC-TGCAAACC CGTAAGTGGAAAGAC TERM 710 641853 - 641817 - g 73 -8.6 -3.84406 | TCTGCACCACAACAA GCGGCACCAGCGCAAA ATCAA TATGCGCCAGCGCCTC AAGCTGCACCTGCTT Shew185_0556 641391 - 642095 + | single-strand binding protein TERM 711 642148 - 642138 - f 74 -4.6 -4.90525 | opp_overlap 642138 642139, overlap 642133 TAACTGTAAACAAAA GCCC CTT GAGC TCTTATTCTTACTGA TERM 712 642139 - 642194 + F 88 -2.8 -6.0427 | gap 2, opp_overlap 642138 642133, overlap 642138 AACTGTAAACAAAAG CCCCTTGAGCTCTTATTCTTACTGAC TTTCAC GTCTTTAAGG-TAA-ATCTCAAGGGG TTTTTTTTGTATAAT Shew185_0557 642271 - 643593 + | phage integrase family protein TERM 713 643910 - 643924 + G 75 -3.5 -5.13741 | TCTGAGTGGAAGCTA GGTTC AATTA GAGCC TTTTTATTGAATTGG TERM 714 643972 - 643953 - g 83 -2 -5.64274 | overlap 643955 643957 GGATTGATAAAAAAA TAGAGGGC ATAA GCCCTAAA ATTGAGTCTTGGCTT Shew185_0558 643577 - 645130 + | phage integrase family protein TERM 715 647125 - 647113 - g 89 -3.3 -5.67063 | overlap 647114 TTGAGGATAAAAAAA TGGTC ACA GACCT AGAGGATCGTTGCAA Shew185_0559 645123 - 647204 + | hypothetical protein Shew185_0560 647204 - 647731 + | hypothetical protein Shew185_0561 647811 - 648248 + | hypothetical protein TERM 716 648353 - 648343 - g 78 -5.4 -4.86621 | ACCGTTAAGGAAAAA CTCT TAC AGAG CCAATAGCGGTAAAT Shew185_0562 648245 - 650398 + | AAA ATPase Shew185_0563 651163 - 651441 + | hypothetical protein Shew185_0564 652547 - 651438 - | transposase IS4 family protein TERM 717 654160 - 654150 - H 72 -3.2 -5.10497 | AACGTATTTAAAAAA CAAC ATG GCTG GTGAAGTACTGCAGA TERM 718 657382 - 657403 + H 100 -10.2 -5.98675 | AATTTTAGTTTTGAA GTGCCAGA GTTGCA TCTGGCAC TTTTTTGTTTTTGTG TERM 719 658182 - 658200 + H 93 -10.4 -4.75372 | opp_overlap 658182 ACGCCCAGCATGAAA CTCATAGT AGT ACTATGAG TTTTTACTGCCTCAT TERM 720 658200 - 658182 - H 80 -10.4 -3.78953 | opp_overlap 658182 ACGCCCAGCATGAAA CTCATAGT AGT ACTATGAG TTTTTACTGCCTCAT Shew185_0568 658564 - 659733 + | UDP-glucose/GDP-mannose dehydrogenase TERM 721 659869 - 659893 + T 85 -2.7 -5.7946 | overlap 659870 GCATCCACCATAGTT AGCCCTCGGTA ATA TTTTGAGGGCA TTTTTTTATTAAAGC TERM 722 660183 - 660197 + T 72 -4.4 -4.69664 | TTGTGTAATTTGGTG TATAAA TTG TTTATA TTTTTCACTCCTATA Shew185_0569 661497 - 660388 - | transposase IS4 family protein TERM 723 661580 - 661567 - H 74 -3.7 -5.02074 | opp_overlap 661576 TCATTTTTTAAAAAA GTGCG ATCT CGCCC TGGGTGTTTTTGTCC TERM 724 661576 - 661586 + H 74 -4.6 -4.9218 | opp_overlap 661567 AAAAAAGTGCGATCT CGCC CTG GGTG TTTTTGTCCTGCATC TERM 725 662222 - 662236 + G 95 -2.8 -6.06723 | opp_overlap 662224, overlap 662224 GGATATTATAAAAGT TAGTCT TCC AGACGA TTTTTTTTTAAACAA Shew185_0570 661752 - 662429 + | hypothetical protein Shew185_0571 662549 - 663406 + | hypothetical protein Shew185_0572 663514 - 664623 + | transposase IS4 family protein TERM 726 664984 - 664961 - T 88 -3.8 -5.75342 | TTCTTCTAAAAAAAA GCCCTCGA AGAGTCAA TTGAGGGC GAAGTGGGTTGGTTG Shew185_0573 665350 - 665081 - | hypothetical protein TERM 727 665454 - 665441 - H 78 -2.5 -5.49568 | AATTTAAAATAAAAA TTAAT AAAA ATTAA TAACTAGCTAGTTTC Shew185_0574 665667 - 666068 + | hypothetical protein TERM 728 666380 - 666411 + F 70 -3.2 -4.9448 | overlap 666370 666383 TTCGCTTTATCTGTT TGAGATAAATATTT GTTA AATTATTTATCTAA TTTTGTTTGATAACT Shew185_0575 666441 - 668729 + | hypothetical protein TERM 729 668841 - 668879 + F 93 -11.4 -4.23054 | opp_overlap 668847, overlap 668842 668847 GTGAAATATATGATT TTAAAACTAGATATAGAT AAT ATTTATATCTAGTTTTAC TTTTCCATCATATAT TERM 730 668842 - 668878 + F 100 -14.9 -3.13109 | opp_overlap 668847, overlap 668841 668847 TGAAATATATGATTT TAAAACTAGATATAGAT AAT ATTTATATCTAGTTTTA CTTTTCCATCATATA TERM 731 668873 - 668847 - f 77 -8.2 -4.16279 | opp_overlap 668842 668841 668847 TATATGATTTTAAAA CTAGATATAGAT AAT ATTTATATCTAG TTTTACTTTTCCATC TERM 732 668847 - 668873 + F 93 -10.4 -4.68645 | opp_overlap 668847, overlap 668842 668841 TATATGATTTTAAAA CTAGATATAGAT AAT ATTTATATCTAG TTTTACTTTTCCATC TERM 733 669360 - 669398 + F 71 -4.8 -4.53398 | gap 1, opp_overlap 669360 TTAATTAAAAATTTA GTTTG-ATTTACCATCA TCTCGC TGCTGGTAAATGCGAAC TTGTTTTTGGTCTTA Shew185_0576 669783 - 676373 + | hypothetical protein TERM 734 677953 - 677970 + G 83 -4.1 -5.44119 | TGATTTGGTCGTCAC CCAGC CCGGTATT GCTGG TTTTTTTACGCTAAA TERM 735 679565 - 679555 - g 77 -6.8 -4.63932 | TACTTCTGAACAAAA CGTG TTG CACG TGCTGCTCAACCAGC Shew185_0577 676466 - 681088 + | virulence plasmid 65kDa B protein TERM 736 683655 - 683641 - g 73 -7.2 -4.25104 | CTTCGGGTAGCAAAA TAGAAG GTG CTTCTA CAATTGAAGGTAGGA Shew185_0578 681381 - 684269 + | YD repeat-containing protein TERM 737 684426 - 684402 - f 83 -12.2 -3.24329 | overlap 684400 684404 CAGGGCTAACGAATA TAGGGACGGT TCATT ACCGTCCCCA GGCAAAAAATCAATC TERM 738 684424 - 684404 - f 85 -12.6 -3.18366 | overlap 684402 684400 GGGCTAACGAATATA GGGACGGT TCATT ACCGTCCC CAGGCAAAAAATCAA TERM 739 686043 - 686033 - g 71 -6.8 -4.25104 | overlap 686034 686038 TGTCCTGGATTAAAA CGGA ACG TCCG GCCGGACATGCCTCC TERM 740 687642 - 687622 - g 77 -3.9 -5.01497 | overlap 687623 687636 ATTATCACACAAAAA CCACTCCTG GAA CAGCAGCGA GAGGCCGCAAATACA Shew185_0579 685087 - 687951 + | YD repeat-containing protein TERM 741 688012 - 688049 + F 90 -8.6 -5.00895 | gap 1, overlap 688020 TAGACCTAAAGAAGA CAATCCGG-TGAGACAG TTTTC CTGTCTCATTTGGGTTG TTTTTGTCTCATCCC TERM 742 688020 - 688040 + F 83 -9.8 -3.95126 | overlap 688012 AAGAAGACAATCCGG TGAGACAG TTTTC CTGTCTCA TTTGGGTTGTTTTTG Shew185_0580 688115 - 688675 + | resolvase domain-containing protein TERM 743 689059 - 689039 - f 80 -10.5 -3.69455 | ATAAAAAGTCCCAAA GGCTTGCTT AGT AAGCAAACC GTCAATCGCTGGCTT Shew185_0582 690369 - 690668 + | type II secretion system protein TERM 744 691777 - 691757 - T 77 -6.2 -4.55209 | TACATAGGAAACAAA GCCATAGA AACCA TCTATGAC CAGTTAAAAAATCTG Shew185_0585 692512 - 692087 - | hypothetical protein TERM 745 692217 - 692195 - G 73 -2.1 -5.00851 | gap 1 ACGAATTAAATAAAA GGCATA-TAA ATTT TCATTATGCC TGTACTGACTATATC Shew185_0586 693143 - 692520 - | winged helix family two component response transcriptional regulator TERM 746 693399 - 693385 - R 80 -6.4 -4.7254 | overlap 693387 ATCTTTCACTAAAAA TAGCGC CAG ACGCTA CTCTGGCACATCAAA TERM 747 693408 - 693387 - R 75 -8 -3.98256 | overlap 693385 CTTTCACTAAAAATA GCGCCAGA CGCTAC TCTGGCAC ATCAAAACTACACTT Shew185_0587 696420 - 693478 - | Ig domain-containing protein TERM 748 695575 - 695609 + g 80 -12.3 -2.86271 | AGTAGGGCTCTGAAC GTGTTGCAAATGGTA TTCTT TGCCATTGGCAACAC TAATTGTCATCCCCG TERM 749 697108 - 697098 - H 72 -3.2 -5.10497 | AACGTATTTAAAAAA CAAC ATG GCTG GTGAAGTACTGCAGA TERM 750 699362 - 699407 + G 84 -12.9 -3.15231 | gap 1, opp_overlap 699371 TCGTTTCGTTAACTT TCTTAACAACGTGTACAACTTT AAT AGAGTTG-GCACGTGGTTAAGA TTGAATGGTTATACT TERM 751 700055 - 700044 - g 71 -3 -4.93365 | GTGTATAATGAAAAA GTTT TAAA AAAC GATATCCCTATAAAT Shew185_0588 697296 - 700202 + | Ig domain-containing protein TERM 752 701319 - 701339 + F 76 -6.9 -4.32046 | TTACGTTACTGAATC GTCCCAATA TTG TATTGTGAC TTTACTTTTTCGGGG Shew185_0589 701549 - 702118 + | hypothetical protein TERM 753 702135 - 702160 + F 83 -9.7 -3.8591 | opp_overlap 702133 702131 702135 CGAAGAAAATACAGA GTCGCGAGAAT TGTA AATCTCGCGGC TTATTCCTTGTGGAG TERM 754 702717 - 702702 - g 81 -6.2 -5.00616 | CTCTTCGGCAAAAAA TGAAGA GCAA TCTTCA TATCCGATTGAGTTC TERM 755 703369 - 703382 + G 77 -6.7 -4.564 | opp_overlap 703368 703369 ATTTTGAATAATAAC GCTGA TTAC TCAGC TTTTAATTTACAATT TERM 756 704956 - 704968 + G 80 -4.1 -5.18726 | overlap 704949 AACGTGATTAAAAGC CTTGA TAG TCAGG TTTTTATTGTCAGCG TERM 757 705099 - 705127 + G 83 -7.5 -4.72986 | opp_overlap 705107 AAAAGGGAGTACTTT CACATTAACATCT GAA AGACGTCAATGTG TTTTTGATAAAGATG Shew185_0590 702634 - 705480 + | P pilus assembly protein porin PapC-like protein Shew185_0591 705473 - 706207 + | hypothetical protein Shew185_0592 706209 - 707216 + | hypothetical protein Shew185_0593 708059 - 708610 + | hypothetical protein TERM 758 709199 - 709182 - T 79 -7 -4.62783 | opp_overlap 709182 709184 CACGCATTGCAAAAA GAGCGT AACCCG ACGCTC TCTTCCCGAATGTAG Shew185_0594 710347 - 709247 - | transposase IS4 family protein TERM 759 711919 - 711885 - g 80 -12.3 -2.86271 | CGGGGATGACAATTA GTGTTGCCAATGGCA AAGAA TACCATTTGCAACAC GTTCAGAGCCCTACT Shew185_0595 711074 - 713998 + | Ig domain-containing protein Shew185_0596 714722 - 715294 + | OmpA domain-containing protein TERM 760 715772 - 715755 - f 71 -6.3 -4.28432 | gap 1, overlap 715765 AAGGCGAATGGAAAA CGC-GCAA GTA TTGCAGCG AAAAACGCTGCACCA Shew185_0598 716818 - 717159 + | hypothetical protein TERM 761 717260 - 717289 + F 71 -6.5 -4.2535 | gap 1, opp_overlap 717267, overlap 717268 TATTTGTTCTGCTGT GAACAAGCGCTCTC ATC GGGAGCA-TTGTTC TTTTCCGTATAATCT Shew185_0599 717913 - 718347 + | hypothetical protein Shew185_0600 718380 - 719030 + | hypothetical protein TERM 762 719339 - 719360 + F 72 -4.4 -4.66163 | ATAGGGGATGTTTGT GCGCTTTT ACGAGC AATAGCGC TTTTTGGGTAGCAAT Shew185_0601 719519 - 719809 + | transposase IS3/IS911 family protein Shew185_0602 720222 - 720506 + | SMC domain-containing protein TERM 763 721022 - 721039 + T 100 -7.7 -5.98675 | opp_overlap 721020 721022 ATTAAAGCTAGAAGA GGTCTGT TTAT ACAGGCC TTTTTTGTTTTTATC Shew185_0603 722113 - 721190 - | transposase IS4 family protein Shew185_0604 722296 - 722979 + | two component transcriptional regulator Shew185_0605 722989 - 724425 + | integral membrane sensor signal transduction histidine kinase Shew185_0606 724512 - 725318 + | PEBP family protein Shew185_0607 725386 - 726606 + | RND family efflux transporter MFP subunit TERM 764 727250 - 727221 - g 71 -10.1 -2.87344 | opp_overlap 727219 727224 TATTTTGGTGACACA CGATCCGCATATT GCCG AATTTGCAGATCG CGTCATTGAGCTAAA TERM 765 727577 - 727561 - g 73 -3.6 -4.9138 | ACTATTGAAATAAAA CCAGGC ACAGG GCGTGG CGATCGCCGGTCTGA TERM 766 727978 - 727999 + G 73 -5.1 -4.57341 | gap 1, overlap 727974 AATGTTTGGTTGCCG TACACCACGG TGT CCG-GGCGTA TTTTTAGGCAAAATT Shew185_0608 726613 - 728559 + | ABC transporter related Shew185_0609 729100 - 729906 + | IS element transposase Shew185_0610 731463 - 729919 - | transposase IS66 TERM 767 731017 - 731034 + g 73 -3.3 -4.86001 | overlap 731018 ATATTTTACCCGTTC ATGGCGG ATAA CCGTCAC TTTTTGTGGAATAAT TERM 768 731552 - 731531 - R 74 -4.5 -4.98255 | opp_overlap 731531 GTTCAAGCATAAAAA TGTGATC GCCTTTTT GATCACA CTGTTAGGTTAGTTA Shew185_0611 731892 - 731548 - | IS66 Orf2 family protein Shew185_0612 732191 - 731892 - | hypothetical protein TERM 769 732042 - 732059 + g 80 -4.8 -5.02476 | TTGCAATCGTTGTGG CTCCGG CTGTGT TCGGAG TTTTTTGGCCCATGT TERM 770 732184 - 732226 + g 71 -7 -4.11322 | TGGTGTTTTTCTTGT GATGACATAGTGCCTCCTTA AAT TGGTGAGGTACTATGACAAC TATTTTTATGATTGA TERM 771 732400 - 732370 - R 79 -9.9 -3.73107 | TTATCAAAGTCTAAA TTGAGAATTATGG GTACA CCATAATACTCAA TAACACTAGAAAAAT TERM 772 733128 - 733104 - R 100 -14.4 -3.53298 | opp_overlap 733104 733108, overlap 733108 ATCATCTTAAATGAA CAAAGCCACG CGAGT CGTGGCTTTG TTGTTTCTGGTCTTT TERM 773 733104 - 733128 + r 100 -14.4 -4.15881 | opp_overlap 733104 733108, overlap 733108 ATCATCTTAAATGAA CAAAGCCACG CGAGT CGTGGCTTTG TTGTTTCTGGTCTTT TERM 774 733124 - 733108 - R 90 -9.4 -4.39696 | opp_overlap 733104 733108, overlap 733104 TCTTAAATGAACAAA GCCACG CGAGT CGTGGC TTTGTTGTTTCTGGT TERM 775 733108 - 733124 + r 91 -9.4 -4.63952 | opp_overlap 733108 733104, overlap 733104 TCTTAAATGAACAAA GCCACG CGAGT CGTGGC TTTGTTGTTTCTGGT Shew185_0613 734281 - 733214 - | porin TERM 776 734416 - 734438 + r 76 -10.7 -2.73619 | opp_overlap 734409, overlap 734386 734415 734418 734423 734424 734426 AGAGGCAAGGCGTCG CATATCTGC AGCGG GCAGATATG ATTTGCCCGCTGGTT TERM 777 734423 - 734451 + r 95 -13.9 -3.54307 | opp_overlap 734409, overlap 734418 734416 734415 734424 734426 AGGCGTCGCATATCT GCAGCGGGCAGAT ATG ATTTGCCCGCTGG TTTGGGAAAGGTGTT TERM 778 734424 - 734450 + r 100 -17.4 -2.72263 | opp_overlap 734409, overlap 734418 734416 734415 734423 734426 GGCGTCGCATATCTG CAGCGGGCAGAT ATG ATTTGCCCGCTG GTTTGGGAAAGGTGT TERM 779 734426 - 734448 + r 93 -14.2 -2.90615 | opp_overlap 734409, overlap 734418 734416 734415 734424 734423 CGTCGCATATCTGCA GCGGGCAGAT ATG ATTTGCCCGC TGGTTTGGGAAAGGT TERM 780 734494 - 734476 - R 79 -8.8 -4.07568 | opp_overlap 734475 734476, overlap 734477 GGTGTTGCCCTAAAA CCCCGCTA ATG CAGCGGGA CTTTAGGTTAAGGAA TERM 781 734493 - 734477 - R 75 -10.1 -3.04398 | opp_overlap 734476 734475, overlap 734476 GTGTTGCCCTAAAAC CCCGCTA ATG CAGCGGG ACTTTAGGTTAAGGA Shew185_0614 735237 - 734512 - | fumarate reductase iron-sulfur subunit Shew185_0615 737243 - 735234 - | fumarate reductase flavoprotein subunit TERM 782 736465 - 736487 + g 70 -9.8 -3.19522 | CCCGCAGGCACTATG GCGGTGGGGT GAA ACTGCACCGC TTCCATATTGCCTAA Shew185_0616 738120 - 737395 - | fumarate reductase cytochrome b-556 subunit Shew185_0617 739561 - 738260 - | anaerobic c4-dicarboxylate antiporter TERM 783 739595 - 739621 + r 93 -12.3 -3.97709 | opp_overlap 739595 TTTTTAATTTCAATA GCCTGCGCATA TTCAC TATGCGCTGGC TTATTCTTGAATCAT TERM 784 739621 - 739595 - R 84 -12.3 -3.09492 | opp_overlap 739595 TTTTTAATTTCAATA GCCTGCGCATA TTCAC TATGCGCTGGC TTATTCTTGAATCAT TERM 785 739642 - 739671 + r 81 -12.1 -2.56046 | opp_overlap 739636 CTTGAATCATCGAGT TTTGGGCTGGGGA AGGC TCCCCAGCCCCAC TGAGTTACACTTTGG Shew185_0618 741115 - 739676 - | aspartate ammonia-lyase TERM 786 741956 - 741935 - g 71 -7.3 -4.09215 | GACATGAACGATAAA GTTTGGCTA GCGT TAGCCAAGC GCATCAATCTGTTAC Shew185_0619 741671 - 742729 + | L-asparaginase, type II TERM 787 742751 - 742782 + F 70 -9.5 -2.5882 | opp_overlap 742756, overlap 742749 742756 AGTTGAGTGATAAAA AAAAAGCCCTGCG CATATT CGTAGGGCTTTTG CATTTTGTCATTGAG TERM 788 742756 - 742777 + F 90 -9.4 -4.4595 | opp_overlap 742756, overlap 742751 742749 AGTGATAAAAAAAAA GCCCTGCG CATATT CGTAGGGC TTTTGCATTTTGTCA TERM 789 742777 - 742756 - f 100 -7.2 -6.24157 | opp_overlap 742751 742749 742756 AGTGATAAAAAAAAA GCCCTGCG CATATT CGTAGGGC TTTTGCATTTTGTCA Shew185_0620 743385 - 743969 + | hypothetical protein TERM 790 744961 - 744982 + G 78 -5.1 -4.83615 | opp_overlap 744980, overlap 744954 744959 ATGCTACTCGCGAGA CGCTGCTGT CTTT ATATCAGCG TTTTTATACGCCCTC TERM 791 745075 - 745059 - g 70 -2.2 -4.98103 | GAACAAAAGATAAAA CAACAG TTTAC CAGTTG GCAGGCGGCGCCTTT TERM 792 745232 - 745275 + G 85 -12.4 -3.31726 | overlap 745230 CCCTACCGACAGCCC TGCCGTGCGCGAGCAGGA AATACTGC TCGAGCTCGCCCACGGCA TCTTGTATCGCCGAA Shew185_0621 744327 - 747134 + | peptidase M16 domain-containing protein TERM 793 747175 - 747204 + T 100 -13.7 -4.79352 | GATCATTTACCGCCA TATCCCCTGTGCT AGCC AGTGCAGGGGATA TTTTGTTCTACCTCC Shew185_0622 750002 - 747285 - | hypothetical protein TERM 794 747806 - 747790 - G 75 -8.1 -4.19238 | GCCGTAATGCTAAAA GATATCA GCA TGATATC GCGCTCTTCCCCTTG Shew185_0623 750379 - 751749 + | hypothetical protein TERM 795 751802 - 751781 - f 73 -8.7 -3.69256 | opp_overlap 751783, overlap 751783 ACTTAGCTAATACAA GAGCGCTAC TTAG GTAGCGCTT TTTTTGGGCTGTTTT TERM 796 751800 - 751783 - f 85 -11.3 -3.42482 | opp_overlap 751783, overlap 751781 TTAGCTAATACAAGA GCGCTAC TTAG GTAGCGC TTTTTTTGGGCTGTT TERM 797 751783 - 751800 + F 100 -11.3 -5.46629 | opp_overlap 751783 751781 TTAGCTAATACAAGA GCGCTAC TTAG GTAGCGC TTTTTTTGGGCTGTT TERM 798 753039 - 753054 + G 71 -9 -3.53761 | opp_overlap 753041 TGTCGTTGGCGATTA CATGCC TGTT GGCATG TTTAAGCAGCAATTG Shew185_0624 751981 - 753105 + | putative transmembrane protein TERM 799 753261 - 753225 - T 93 -7.3 -5.36441 | opp_overlap 753225 GTGGGACAGAAAAAA GCCCAACACAGCG TTTTTAATTTG CGCTTTGCTGGGC TTTTTGCTGTTAACG TERM 800 753225 - 753261 + T 79 -5.8 -4.87626 | opp_overlap 753225 GTGGGACAGAAAAAA GCCCAACACAGCGT TTTTAATTT GCGCTTTGCTGGGC TTTTTGCTGTTAACG Shew185_0625 754737 - 753286 - | MltD domain-containing protein TERM 801 753824 - 753841 + g 71 -9.1 -3.52515 | TTGATCGGGATCACG CCTTGGC GAAA GCCAGGG TTATAGGTTTTAAAT TERM 802 754415 - 754405 - G 73 -2.4 -5.10767 | opp_overlap 754408 754409, overlap 754406 754407 GATGTAATACAAAAA GGGC TCG GCGC GTTCGCCGACTTGGT TERM 803 755036 - 755048 + G 71 -4.1 -4.74103 | opp_overlap 755031 GAGGAGTTAACCGAG TTTCC GCG GGAGA TTTTTGACTTAGCCG Shew185_0626 754958 - 756313 + | protein kinase Shew185_0627 756609 - 757826 + | RND family efflux transporter MFP subunit Shew185_0628 757826 - 760903 + | acriflavin resistance protein TERM 804 761120 - 761132 + G 71 -9.1 -3.50953 | overlap 761118 GTTACAGTGCTTTCA CAGGG CGC CCCTG TATTTGGCTTGTTCG TERM 805 761630 - 761620 - g 71 -8.2 -3.64822 | AGCTTGCCAGCCAAA CGGC GTT GCCG ACTCAAGTGTCATCC TERM 806 761640 - 761653 + G 78 -5.3 -4.99035 | TTGCCGACTCAAGTG TCATC CCAC GATGA TTTTTATCTAAGTCA TERM 807 762074 - 762050 - g 71 -8.5 -3.65415 | TGAATCACAAATCAA GACCTTAGCTC AAA GTGCCAAGGCC GAAGATAAGCGCTTA Shew185_0629 761097 - 762914 + | Sel1 domain-containing protein TERM 808 763026 - 763053 + T 80 -11.4 -2.82773 | opp_overlap 763031, overlap 763031 TCGCATTTAGCCAAT AAAAATCCCTGC CATG GCAGGGATTTTG CTATTTATTCAGTTG TERM 809 763048 - 763031 - T 95 -11.3 -5.10461 | opp_overlap 763031 763026 TTTAGCCAATAAAAA TCCCTGC CATG GCAGGGA TTTTGCTATTTATTC TERM 810 763031 - 763048 + T 93 -11.3 -4.55446 | opp_overlap 763031, overlap 763026 TTTAGCCAATAAAAA TCCCTGC CATG GCAGGGA TTTTGCTATTTATTC Shew185_0630 766333 - 763121 - | collagenase TERM 811 765812 - 765797 - G 71 -9 -3.53091 | opp_overlap 765796 765801 765806, overlap 765800 ATTGGCCTCGCTAAA TAGCGC GGTG GCGCTA CTGCCTTTGAGGCTA TERM 812 767409 - 767421 + G 73 -4.8 -4.75472 | ACGTGGTCTTTGATA TCGC GGGTG GCGA TTTTATTAATCTCGA Shew185_0631 766745 - 767746 + | quinone oxidoreductase putative PIG3 TERM 813 768221 - 768207 - f 70 -2.8 -5.05782 | opp_overlap 768207 768209, overlap 768209 ATTCAGGCTAAAAAA CTCATA GTG TATGTG TTGATTTAAGGGTAT TERM 814 768595 - 768611 + G 72 -10.1 -3.07259 | overlap 768594 ACCAGAAGTGGAATC CGATGCC GTA GGCGTCG ATTTTGACGATGATT Shew185_0632 768245 - 768649 + | hypothetical protein TERM 815 768678 - 768650 - T 73 -9.6 -3.21416 | GATTTTGATGATTAA CACAGTGTCGGC TTAGG GCTAACACTGTG AGTGTAAGGAATAAA TERM 816 768678 - 768719 + T 91 -10.5 -4.56702 | gap 1, opp_overlap 768690, overlap 768681 TAGGGCTAACACTGT GAGTGTAAGGAATAAAATAG TGC TTATTTTATTCCTTAC-CGC TTTATTTCCTTCCGC TERM 817 768681 - 768717 + T 81 -11.9 -2.59256 | opp_overlap 768690, overlap 768678 GGCTAACACTGTGAG TGTAAGGAATAAAATAG TGC TTATTTTATTCCTTACC GCTTTATTTCCTTCC Shew185_0633 769852 - 768818 - | aldose 1-epimerase Shew185_0634 771158 - 770013 - | galactokinase TERM 818 771368 - 771410 + r 100 -13.5 -3.81 | AGTAGTTAGTTGGAG GCCGCACAAACTTGCAG AGGAAGTTA CTGCTCGTTTGTGCGGC TTGTTATGGCGTGAT Shew185_0635 773109 - 771454 - | sodium/hydrogen exchanger TERM 819 771508 - 771520 + g 71 -2.6 -4.99638 | overlap 771507 771506 TTGCGCTGTTTCTTC CGCT TGTGC GGCG TTTTTCTCTGAGTCT TERM 820 773180 - 773205 + r 95 -12 -4.27467 | opp_overlap 773180 CACTGGAACAAAAAA GCGGACTTTT AATGAA AAAAGTCCGC TTTCTATTGGTGTTG TERM 821 773205 - 773180 - R 100 -12 -5.46657 | opp_overlap 773180 CACTGGAACAAAAAA GCGGACTTTT AATGAA AAAAGTCCGC TTTCTATTGGTGTTG Shew185_0636 775150 - 773291 - | thiol:disulfide interchange protein precursor TERM 822 774206 - 774223 + g 73 -7 -4.21194 | TGAGTTCATCTTCTC CTGCCA GCTCGA TGGCAG TTTTAAATCGTACAG Shew185_0637 775470 - 775147 - | CutA1 divalent ion tolerance protein TERM 823 775932 - 775905 - g 74 -4 -4.84274 | gap 1, overlap 775898 CAAGTACAGCAAAAA CTCGCTCGCGGTG AAG CGCCGGG-GCAAG AAATCGTCGAAGGCA Shew185_0638 775722 - 776330 + | FxsA cytoplasmic membrane protein Shew185_0639 776992 - 776456 - | hypothetical protein TERM 824 777141 - 777110 - R 73 -7.2 -3.98661 | opp_overlap 777130 777131, overlap 777111 777113 GACATGTATTAGAAA TGACCAGCCAGCCA CGAG TGACTGACCGGCCG CGCCGGGAAGCGTTT TERM 825 777140 - 777111 - R 78 -10.7 -2.98714 | opp_overlap 777130 777131, overlap 777110 777113 ACATGTATTAGAAAT GACCAGCCAGCCA CGAG TGACTGACCGGCC GCGCCGGGAAGCGTT TERM 826 777138 - 777113 - R 72 -9.7 -3.0439 | opp_overlap 777130 777131, overlap 777111 777110 ATGTATTAGAAATGA CCAGCCAGCCA CGAG TGACTGACCGG CCGCGCCGGGAAGCG Shew185_0640 780278 - 777189 - | acriflavin resistance protein TERM 827 779366 - 779376 + g 74 -6.8 -4.4017 | opp_overlap 779365 779366 CAAGCTCGGCTAAAC GGTC ACT GACC TTTTGTCCAACTTCA TERM 828 779955 - 779974 + g 83 -8.6 -4.49344 | gap 1 ACGACGCACTTCATC CCACACCTG TGG CAGG-GTGG TTTTGTCGTAGCTTT Shew185_0641 781364 - 780282 - | RND family efflux transporter MFP subunit TERM 829 781343 - 781309 - G 74 -9.3 -3.65046 | gap 1 TCCGCAGGCGAACAA CCACTGAGCAGGGCTG GAAG CAGCATTGC-CAGTGG CAAGAGTCGATATGA Shew185_0642 781493 - 782482 + | LysR family transcriptional regulator Shew185_0643 783851 - 782484 - | MATE efflux family protein TERM 830 782646 - 782632 - G 74 -9.2 -3.63336 | ATATAGGATCCTAAA GCCGCC AGC GGCAGC ATAAGTAGCACTAAG TERM 831 783757 - 783739 - G 100 -7.4 -5.60993 | TGGCTGATAAAAAAA GTGTCAGC GAG GCTGAAAC CTAGAATGGTCATAA TERM 832 784001 - 784016 + H 86 -4.7 -5.52384 | opp_overlap 784001 CAGACAGCAAAAGAG CAGAC TCAGGT GTCTG TTTTTTTAATCACAA TERM 833 784337 - 784308 - g 88 -2.2 -5.80003 | gap 2, opp_overlap 784315, overlap 784309 TTAAGAAAGAAAAAA TCGAC-GG-TCAAG AAGT CTTGATCCTGTCGG AAGCTGACCTGATGG Shew185_0644 784076 - 784366 + | co-chaperonin GroES Shew185_0645 784424 - 786061 + | chaperonin GroEL TERM 834 786256 - 786219 - f 81 -5.5 -5.01732 | opp_overlap 786225, overlap 786224 786225 AATTGTTGTAAAAAA TGAAAGCCCCGATACTG GAAA CAGTGTCGGGGTTTTGT TTTCTTGGTCTAACG TERM 835 786251 - 786224 - f 90 -9.8 -4.42765 | opp_overlap 786225, overlap 786219 786225 TTGTAAAAAATGAAA GCCCCGATACTG GAAA CAGTGTCGGGGT TTTGTTTTCTTGGTC TERM 836 786250 - 786225 - f 91 -13.3 -3.24575 | opp_overlap 786225, overlap 786224 786219 TGTAAAAAATGAAAG CCCCGATACTG GAAA CAGTGTCGGGG TTTTGTTTTCTTGGT TERM 837 786225 - 786250 + F 100 -15.5 -5.28831 | opp_overlap 786224 786219 786225 TGTAAAAAATGAAAG CCCCGATACTG GAAA CAGTGTCGGGG TTTTGTTTTCTTGGT TERM 838 786452 - 786430 - f 71 -7.6 -3.91911 | CCGAGGTGAATCAAA GTCGTGGGGC TTC ACCCCACACC CGACCAAGGAGGACT TERM 839 786529 - 786519 - f 70 -8.2 -3.6215 | opp_overlap 786518 786509 786519, overlap 786499 CCAACGGAGTTGAAA GCCC CTT GGGC ATTTAGCGTCCTTAT TERM 840 788457 - 788445 - g 71 -4.7 -4.57073 | GATCTGGCTGAAAAA GGCCC GAT GGGAC GTGAAGCTGGTTCTG Shew185_0647 788274 - 789449 + | HEAT repeat-containing PBS lyase Shew185_0649 790845 - 791081 + | XRE family transcriptional regulator TERM 841 791342 - 791322 - g 76 -11.2 -3.19668 | opp_overlap 791320, overlap 791297 GATTATCTAATTGAA TCCCTTGG CGTCT CCAAGGGA AATACCTTTGCCTTG Shew185_0650 791085 - 792386 + | HipA domain-containing protein TERM 842 792548 - 792527 - f 76 -7.3 -4.24432 | gap 1, opp_overlap 792527, overlap 792522 AAAGGCAAAATTAAA GTCGTGGGGC TTC ACCCCAC-AC TTGATCTAGGAGGAC TERM 843 792737 - 792719 - f 72 -10.3 -2.64155 | overlap 792715 TCCCCCCGAAAGCTA CGCAGAC GTCCT GTCTGCG CTACACGATTTTCTT Shew185_0651 793515 - 794090 + | hypothetical protein Shew185_0653 794689 - 794438 - | hypothetical protein Shew185_0654 794857 - 796353 + | ABC transporter related TERM 844 796454 - 796497 + F 91 -9.6 -4.63932 | gap 1, opp_overlap 796459 796460, overlap 796496 TGGAAGTGTTGTTAT GCAAAGCTGGGATGGAAAGCC TAA GGCTTGCCATCCCA-TTGAGC TTTTATTACAAGCTA TERM 845 796493 - 796459 - f 88 -11.4 -3.64703 | opp_overlap 796454, overlap 796460 GTGTTGTTATGCAAA GCTGGGATGGAAAGCC TAA GGCTTGCCATCCCATT GAGCTTTTATTACAA TERM 846 796492 - 796460 - f 95 -14.9 -2.78679 | opp_overlap 796454, overlap 796459 TGTTGTTATGCAAAG CTGGGATGGAAAGCC TAA GGCTTGCCATCCCAT TGAGCTTTTATTACA Shew185_0655 796751 - 798718 + | putative aminopeptidase precursor TERM 847 798759 - 798745 - f 73 -8.5 -3.66666 | opp_overlap 798745 TTGAAAATCCCGAAA GCGCC CTAGT GGCGC TTTTTTATAGGCTTT TERM 848 798745 - 798759 + F 93 -8.5 -5.28826 | opp_overlap 798745 TTGAAAATCCCGAAA GCGCC CTAGT GGCGC TTTTTTATAGGCTTT TERM 849 798991 - 798966 - f 80 -10.5 -3.61715 | opp_overlap 798964, overlap 798968 CACTGGCGTGAATAA TAGTTTCTGGC CTAG GCCAGAAACTC GATGATTATTGTGGT TERM 850 798989 - 798968 - f 93 -13.1 -3.38812 | opp_overlap 798964, overlap 798966 CTGGCGTGAATAATA GTTTCTGGC CTAG GCCAGAAAC TCGATGATTATTGTG Shew185_0656 799173 - 799469 + | hypothetical protein TERM 851 799833 - 799814 - g 71 -8.6 -3.64703 | gap 1, opp_overlap 799814 799818 CGCGCTTCACTCAAA CATGCCGCC AAG GGCGG-ATG TTGTCATTCAACAGG Shew185_0657 799466 - 799981 + | hypothetical protein TERM 852 800042 - 800025 - T 72 -9.8 -3.04415 | overlap 800020 CACGATTAAACCATA GGGGCG GGCAAG CGCCCC TCGAATATCCGCTAA Shew185_0658 800348 - 800001 - | thioredoxin domain-containing protein Shew185_0659 801053 - 800400 - | cold-shock DNA-binding domain-containing protein TERM 853 801391 - 801430 + H 100 -16.6 -2.87683 | overlap 801391 801393 801393 801414 AAAAACTTGCAATCT CACTGTGTGCTACATAGT ATTT GCTGTGTGGCGCACAGTG TGTGTGACACAGTGT TERM 854 801393 - 801428 + H 91 -13.4 -2.98942 | overlap 801391 801391 801393 801414 AAACTTGCAATCTCA CTGTGTGCTACATAGT ATTT GCTGTGTGGCGCACAG TGTGTGTGACACAGT TERM 855 801414 - 801442 + H 75 -10.3 -3.04144 | overlap 801393 801391 GCTACATAGTATTTG CTGTGTGGCGCAC AGT GTGTGTGACACAG TGTTCAGGATAGGAA Shew185_0660 801465 - 801851 + | PadR-like family transcriptional regulator Shew185_0661 801853 - 802815 + | hypothetical protein TERM 856 802809 - 802850 + T 83 -3.2 -5.52986 | gap 1, overlap 802817 GCGTAAACTCGCCAG CCAGTAAGGCTTAACCT AGGCTTTGC AGGT-GAGTCTTATTGG TTTTTTTCATCGAAT Shew185_0662 804813 - 802819 - | diguanylate cyclase with PAS/PAC sensor TERM 857 802871 - 802895 + g 100 -10.8 -4.72846 | opp_overlap 802869 TTCATCGAATACATG GCCTGATCAG CATGA TTGATCAGGC TTTTTGCATCTGTGC Shew185_0663 805945 - 805145 - | hypothetical protein Shew185_0664 806261 - 807757 + | alkaline phosphatase Shew185_0665 807798 - 809435 + | alkaline phosphatase TERM 858 809547 - 809509 - f 76 -6.7 -4.43879 | gap 1, opp_overlap 809513 809514, overlap 809510 809512 809513 AGTAGCTAAGTAAAA GCAGTGCCGATGGATGGC ATAC GTCATCCATCGGC-CTTT AGCCTAACGATTTAA TERM 859 809546 - 809510 - f 75 -10.2 -3.25604 | gap 1, opp_overlap 809513 809514, overlap 809509 809512 809513 GTAGCTAAGTAAAAG CAGTGCCGATGGATGGC ATAC GTCATCCATCGGC-CTT TAGCCTAACGATTTA TERM 860 809544 - 809512 - f 85 -12.8 -3.1867 | gap 1, opp_overlap 809513 809514, overlap 809510 809509 809513 AGCTAAGTAAAAGCA GTGCCGATGGATGGC ATAC GTCATCCATCGGC-C TTTAGCCTAACGATT TERM 861 809513 - 809544 + F 100 -15.2 -3.60475 | opp_overlap 809512 809510 809509 809513, overlap 809514 GCTAAGTAAAAGCAG TGCCGATGGATGGC ATAC GTCATCCATCGGCC TTTAGCCTAACGATT TERM 862 809544 - 809513 - f 90 -13 -2.50479 | opp_overlap 809513 809514, overlap 809512 809510 809509 GCTAAGTAAAAGCAG TGCCGATGGATGGC ATAC GTCATCCATCGGCC TTTAGCCTAACGATT TERM 863 809514 - 809543 + F 100 -18.7 -2.75963 | opp_overlap 809512 809513 809510 809509, overlap 809513 CTAAGTAAAAGCAGT GCCGATGGATGGC ATAC GTCATCCATCGGC CTTTAGCCTAACGAT Shew185_0666 809622 - 810350 + | hypothetical protein TERM 864 810438 - 810455 + F 90 -8.4 -5.17786 | opp_overlap 810438 810437 GTCCGTATGTATAAG CGCCCA CAGAGT TGGGCG TTTTTGCTTTTATTC Shew185_0667 810653 - 811495 + | AraC family transcriptional regulator TERM 865 812346 - 812378 + G 71 -8.5 -3.6269 | overlap 812343 TTAAATTGCAGCGAC TGACACCGATTATCG ATG CAATTATTGGTGTCA TCTTTATGTCGGTCG Shew185_0668 811724 - 812431 + | lysine exporter protein LysE/YggA Shew185_0669 812530 - 813360 + | hypothetical protein TERM 866 814065 - 814088 + G 77 -3.8 -5.01497 | gap 1, overlap 814063 814066 814068 CCCTATTACCATTGC TGTA-GCCGCG TTG TGCGGCGTGCG TTTTTGTGTGGTGAT TERM 867 814704 - 814718 + G 77 -2.8 -5.19328 | overlap 814706 GAGCGCGACAACCAG CCCAAT GGC ATTGCG TTTTTATTATCGGAT Shew185_0670 814008 - 814985 + | hypothetical protein TERM 868 815068 - 815079 + F 74 -4.4 -4.87665 | ATCCACTTTTTTTAA TGAG TAAG CTCA TTTTTATGCCTCAGC Shew185_0671 815845 - 816579 + | hypothetical protein TERM 869 817088 - 817113 + T 100 -10.6 -5.28176 | opp_overlap 817088 TTCGTGAGATAAAAA GAGCATTAAG GATGAA CTTAATGCTC TTTTTTATGGATAAA TERM 870 817113 - 817088 - T 93 -10.6 -4.96848 | opp_overlap 817088 TTCGTGAGATAAAAA GAGCATTAAG GATGAA CTTAATGCTC TTTTTTATGGATAAA Shew185_0672 819045 - 817105 - | diguanylate cyclase/phosphodiesterase with GAF sensor TERM 871 817952 - 817962 + g 77 -6.8 -4.56775 | TTGCTGATCGTCATC GCAG CCC CTGC TTTTTGCAGCAGAAT TERM 872 818471 - 818484 + g 73 -4.5 -4.81551 | TCGGCGAGTTCATGG GTGCG TTGT TGCAC TTTTTGCTCTAACTC TERM 873 819097 - 819109 + H 74 -4.1 -5.10497 | ACTATAGTCTTTTTA CTCAT GCT GTGAG TTTTTTGAATAAATT Shew185_0673 819270 - 820031 + | hypothetical protein TERM 874 820095 - 820072 - T 83 -11 -3.78329 | opp_overlap 820072 TGTGATTAACCTAAA CACTGAGTCC AATT GGGCTCAGTG TTTTTTTATGGCTTA TERM 875 820072 - 820095 + T 100 -13.2 -5.66684 | opp_overlap 820072 TGTGATTAACCTAAA CACTGAGTCC AATT GGGCTCAGTG TTTTTTTATGGCTTA Shew185_0674 820656 - 820108 - | hypothetical protein Shew185_0675 820857 - 821141 + | hypothetical protein Shew185_0676 821477 - 822337 + | protein of unknown function RIO1 TERM 876 822383 - 822366 - T 89 -7 -5.24129 | opp_overlap 822366 822348 TTCGCCCATAAAAAA GACGCT GAAAGT AGCGTC TTTTTTATGCTAAAA TERM 877 822366 - 822383 + T 91 -7.7 -5.31275 | opp_overlap 822366, overlap 822348 TTCGCCCATAAAAAA GACGCTG AAAG TAGCGTC TTTTTTATGCTAAAA Shew185_0677 823331 - 823098 - | transposase IS3/IS911 family protein Shew185_0679 824264 - 824956 + | OmpA/MotB domain-containing protein TERM 878 824985 - 825000 + F 100 -10.4 -5.76237 | opp_overlap 824985 TCTAGTTTTACAAAA GTCGCC TGAG GGCGAC TTTTTTGTTTCTGTG TERM 879 825000 - 824985 - f 90 -10.4 -4.38712 | opp_overlap 824985 TCTAGTTTTACAAAA GTCGCC TGAG GGCGAC TTTTTTGTTTCTGTG TERM 880 825346 - 825334 - g 71 -9.1 -3.48276 | opp_overlap 825339 825339, overlap 825319 GCGGCGCCGATAGAA CTGCG CGC CGCAG GCAGTTTAAAGACTG Shew185_0680 825220 - 826056 + | hypothetical protein TERM 881 826080 - 826110 + T 100 -14.9 -3.32963 | opp_overlap 826086, overlap 826086 AGCTTTTTTGCGAGA TAAAAACGGCACC CTTTC GGTGCCGTTTTTG TTATAAACTCAAACT TERM 882 826104 - 826086 - T 100 -11.7 -4.96848 | opp_overlap 826080 826086 TTTGCGAGATAAAAA CGGCACC CTTTC GGTGCCG TTTTTGTTATAAACT TERM 883 826086 - 826104 + T 100 -11.7 -5.19328 | opp_overlap 826086, overlap 826080 TTTGCGAGATAAAAA CGGCACC CTTTC GGTGCCG TTTTTGTTATAAACT Shew185_0681 827506 - 826142 - | magnesium transporter Shew185_0682 828121 - 827846 - | phosphotransferase system, phosphocarrier protein HPr Shew185_0683 828962 - 828108 - | hypothetical protein Shew185_0684 829402 - 828959 - | PTS IIA-like nitrogen-regulatory protein PtsN TERM 884 829292 - 829337 + g 88 -7.5 -5.1356 | gap 1, opp_overlap 829291, overlap 829295 829305 CTCTTGAGATGAGAG GGT-CGGGTACTGGGCAGCGAC TAA GTCGCTGATGAGTTCCAGTACC TTTTTCTTGCTGCCC Shew185_0685 829692 - 829405 - | sigma 54 modulation protein/ribosomal protein S30EA TERM 885 829614 - 829624 + g 71 -4 -4.79955 | overlap 829619 CGAAATGGCGTTCAA GTTT TGA AAAC TTTTCTTCTACATAT Shew185_0686 831199 - 829721 - | RNA polymerase factor sigma-54 TERM 886 831257 - 831298 + r 77 -10.2 -3.39142 | gap 1 TTGTTATCATCTTGA GTGGAGTCCAATGGTGGCA TAAAT TGCCTGCATTGG-CTCCGC TTGATTAACTATAGC Shew185_0687 832038 - 831307 - | ABC transporter related Shew185_0688 832589 - 832035 - | cell envelope biogenesis YhbN Shew185_0689 833136 - 832576 - | hypothetical protein TERM 887 833118 - 833108 - G 93 -6.8 -5.40072 | overlap 833115 GCCGTTCCAAAAAAA GCGA TAA TCGC GAGTGTCACACGACT Shew185_0690 833684 - 833133 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 888 833435 - 833445 + g 71 -6.8 -4.14013 | GAGTTACGCCGAGCG CCGT CAT ACGG TTTTCAACGATTTTG Shew185_0691 834661 - 833684 - | KpsF/GutQ family protein Shew185_0692 835290 - 836123 + | ABC transporter related Shew185_0693 836120 - 836905 + | hypothetical protein Shew185_0694 836962 - 837435 + | hypothetical protein Shew185_0695 837447 - 838109 + | toluene tolerance family protein Shew185_0696 838106 - 838390 + | SpoIIAA family protein Shew185_0697 838410 - 838667 + | BolA family protein TERM 889 839244 - 839234 - g 77 -8.2 -4.18762 | overlap 839222 AACCGTTATTGAAAA CGCG GCG CGCG AACCTGAAGTGATCG Shew185_0698 838677 - 839936 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 890 839987 - 840016 + T 95 -13.1 -3.59984 | opp_overlap 839994, overlap 839994 TAAATCTCGACCCAT TAAAAAACCAGCT TAAA AGCTGGTTTTTTG TTGTCTGCGTTTTAG TERM 891 839994 - 840009 + T 100 -9 -5.60689 | opp_overlap 839994, overlap 839987 CGACCCATTAAAAAA CCAGCT TAAA AGCTGG TTTTTTGTTGTCTGC TERM 892 840009 - 839994 - T 90 -9 -5.1675 | opp_overlap 839994 839987 CGACCCATTAAAAAA CCAGCT TAAA AGCTGG TTTTTTGTTGTCTGC Shew185_0699 841140 - 840058 - | periplasmic serine protease DegS TERM 893 841084 - 841072 - G 90 -7.7 -5.1356 | GGTTACCAATAAAAA CATGG CCG CCATG ATAAGACCGAAAAGG TERM 894 841192 - 841223 + r 95 -14.6 -2.87132 | opp_overlap 841195, overlap 841195 CATGTTTAATCTATG TAAGCATAGGGAAC CTAA GCTCCCTATGCTTA TGTGTGGCAGAAAAA TERM 895 841220 - 841195 - R 95 -14.1 -3.09933 | opp_overlap 841195 841192 GTTTAATCTATGTAA GCATAGGGAAC CTAA GCTCCCTATGC TTATGTGTGGCAGAA TERM 896 841195 - 841220 + r 89 -11.9 -3.58726 | opp_overlap 841195, overlap 841192 GTTTAATCTATGTAA GCATAGGGAAC CTAA GCTCCCTATGC TTATGTGTGGCAGAA Shew185_0700 842608 - 841256 - | protease Do TERM 897 842753 - 842766 + H 82 -3.9 -5.42862 | opp_overlap 842753 AAAAAGTTCATCATA TTAAC AAAT GTTAA TTTTTTTGAGCCTAT Shew185_0701 843022 - 844134 + | AFG1 family ATPase Shew185_0702 844425 - 844853 + | 50S ribosomal protein L13 Shew185_0703 844868 - 845260 + | 30S ribosomal protein S9 TERM 898 845307 - 845276 - f 78 -11 -3.01712 | opp_overlap 845277 845284, overlap 845284 TTCGTTTTTGGAATA TCAAAAAACCCAGC CTAT GCTGGGTTTTTTAT TTGCTAAAATTTTCG TERM 899 845277 - 845306 + F 90 -12.3 -3.79021 | opp_overlap 845276 845284, overlap 845284 TCGTTTTTGGAATAT CAAAAAACCCAGC CTAT GCTGGGTTTTTTA TTTGCTAAAATTTTC TERM 900 845284 - 845299 + F 100 -10.4 -5.68438 | opp_overlap 845284 845276, overlap 845277 TGGAATATCAAAAAA CCCAGC CTAT GCTGGG TTTTTTATTTGCTAA TERM 901 845299 - 845284 - f 100 -10.4 -5.27779 | opp_overlap 845277 845284, overlap 845276 TGGAATATCAAAAAA CCCAGC CTAT GCTGGG TTTTTTATTTGCTAA Shew185_0704 845393 - 845602 + | hypothetical protein Shew185_0705 845675 - 846970 + | adenylosuccinate synthetase TERM 902 846981 - 846997 + F 100 -13.7 -4.25566 | opp_overlap 846971 846974, overlap 846971 ATTAAGACCTGTTAA GGCCGTG TTT CACGGCC TTTTCCCTGCTTCTT TERM 903 847380 - 847402 + G 73 -7.1 -4.2123 | gap 1, opp_overlap 847380 847385 GGAACCTGTGTAAAG GCAA-ACCCT GTGA AGGGTATTGC TTTGTTACGTGACTC Shew185_0706 847095 - 847751 + | Sel1 domain-containing protein TERM 904 848199 - 848209 + G 73 -8.2 -3.82499 | overlap 848195 848206 GATCGTCGTGGTCGC CGCG AAG CGCG TTTGGTGCGTTTGAT TERM 905 848666 - 848655 - g 91 -7.2 -5.252 | opp_overlap 848655 TATGCGGAGAAAAAA GCCG GTGG CGGC TGGCGTTTATGGGTT TERM 906 850197 - 850185 - g 71 -4.7 -4.4874 | overlap 850186 GCTAAAAAGCCAAAA GCCGC TAA GCGGA GCACGAGAAAGAAAT Shew185_0707 847791 - 850214 + | ribonuclease R TERM 907 850900 - 850917 + G 71 -6.3 -4.14764 | opp_overlap 850902 TGTCGAGCTTGAACG TATCGGT TGCG ACCGGTA TTTGCTTATTTGAAG Shew185_0708 850215 - 850955 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 908 850995 - 851019 + T 73 -10.1 -2.86682 | overlap 850994 851008 851014 CATATGCGGTCAGGC TTGCTGTAACG ACT TGTTGCAGCAA CTATTTGTTGTAGTT TERM 909 851055 - 851084 + T 100 -13.8 -5.20606 | opp_overlap 851055 TTGCAGTAATAAAAA GACCGATTAACT TTAAAC AGTTAATCGGTC TTTTTGTTGGTCTTT TERM 910 851084 - 851055 - T 100 -13.8 -5.1356 | opp_overlap 851055 TTGCAGTAATAAAAA GACCGATTAACT TTAAAC AGTTAATCGGTC TTTTTGTTGGTCTTT Shew185_0709 852542 - 851100 - | major facilitator transporter TERM 911 851933 - 851945 + g 87 -6.9 -5.06451 | TCGCGATGGTTGTGA GTGCC TGC GGCGC TTTTTTCCAGTAATG Shew185_0710 853523 - 852780 - | hypothetical protein Shew185_0711 853737 - 854132 + | 30S ribosomal protein S6 Shew185_0712 854141 - 854446 + | primosomal replication protein N Shew185_0713 854459 - 854686 + | 30S ribosomal protein S18 Shew185_0714 854723 - 855175 + | 50S ribosomal protein L9 TERM 912 855228 - 855193 - T 82 -10.6 -3.5393 | opp_overlap 855203, overlap 855201 855203 ACGACTCGCTTTAAA TATAAAAAGACACCGC CTCG GCGGTGTTTTTTTATG GCTGAAATTTAGGAT TERM 913 855220 - 855201 - T 91 -7.8 -5.19879 | opp_overlap 855203, overlap 855193 855203 CTTTAAATATAAAAA GACACCGC CTCG GCGGTGTT TTTTTATGGCTGAAA TERM 914 855218 - 855203 - T 89 -10.4 -4.22132 | opp_overlap 855203, overlap 855201 855193 TTAAATATAAAAAGA CACCGC CTCG GCGGTG TTTTTTTATGGCTGA TERM 915 855203 - 855218 + T 100 -10.4 -5.64274 | opp_overlap 855203 855201 855193 TTAAATATAAAAAGA CACCGC CTCG GCGGTG TTTTTTTATGGCTGA TERM 916 855399 - 855363 - T 95 -13.1 -3.64184 | opp_overlap 855368, overlap 855368 AAATACGAGCCCAAA TAAAAGCCGCTTACTGC AAA ACAGTGAGCGGCTTTTT GTTTAGAGCAACTGA TERM 917 855394 - 855368 - T 100 -13 -4.88918 | opp_overlap 855368, overlap 855363 CGAGCCCAAATAAAA GCCGCTTACTGC AAA ACAGTGAGCGGC TTTTTGTTTAGAGCA TERM 918 855368 - 855394 + T 100 -14.5 -5.27335 | opp_overlap 855368 855363 CGAGCCCAAATAAAA GCCGCTTACTG CAAAA CAGTGAGCGGC TTTTTGTTTAGAGCA Shew185_0715 857627 - 855429 - | hypothetical protein TERM 919 856391 - 856404 + g 79 -2.3 -5.48028 | GATAGCCTTGTTCAC GTTCG GCAT CGGGC TTTTGTTTTTCTTTA TERM 920 856874 - 856884 + g 88 -8.2 -4.67048 | CGTCACCGGCTTTCA CGCC ATC GGCG TTTATTTTAAGGTAA Shew185_0716 857753 - 859159 + | replicative DNA helicase Shew185_0717 859263 - 860339 + | alanine racemase TERM 921 860464 - 860480 + F 100 -8 -5.58179 | opp_overlap 860459 860464 TGCAGAATCATAAAA CGGTGT GTTAA ACACCG TTTTTTATTGTCATC TERM 922 860480 - 860464 - f 82 -8 -4.58466 | opp_overlap 860464, overlap 860459 TGCAGAATCATAAAA CGGTGT GTTAA ACACCG TTTTTTATTGTCATC TERM 923 860497 - 860526 + F 85 -11.5 -3.35371 | gap 1, opp_overlap 860502, overlap 860499 860502 TTTTTATTGTCATCC CAA-AACCACCGCC TCT GGCGGTGGTGATTG TTCCTTGAGGCTATA TERM 924 860499 - 860523 + F 83 -9.9 -3.81414 | opp_overlap 860502, overlap 860497 860502 TTTATTGTCATCCCA AAACCACCGCC TCT GGCGGTGGTGA TTGTTCCTTGAGGCT TERM 925 860502 - 860520 + F 100 -16 -2.98947 | opp_overlap 860502, overlap 860499 860497 ATTGTCATCCCAAAA CCACCGCC TCT GGCGGTGG TGATTGTTCCTTGAG TERM 926 860520 - 860502 - f 100 -16 -4.13945 | opp_overlap 860502 860499 860497 ATTGTCATCCCAAAA CCACCGCC TCT GGCGGTGG TGATTGTTCCTTGAG Shew185_0718 860606 - 861043 + | transposase IS200-family protein TERM 927 861069 - 861055 - T 81 -11.4 -3.02144 | GTAGTTTTTGGAATA GCCCCT TCC AGGGGC AAGTCAAAGCCGCCT TERM 928 861098 - 861078 - T 83 -11.1 -3.75629 | opp_overlap 861078 861079, overlap 861079 CAGGGGCAAGTCAAA GCCGCCTTC TAA GAAGGCGGA TTCTTTACTTGTAGA TERM 929 861078 - 861098 + T 88 -11.1 -4.12296 | opp_overlap 861078 861079, overlap 861079 CAGGGGCAAGTCAAA GCCGCCTTC TAA GAAGGCGGA TTCTTTACTTGTAGA TERM 930 861079 - 861097 + T 100 -14.6 -3.06655 | opp_overlap 861078 861079, overlap 861078 AGGGGCAAGTCAAAG CCGCCTTC TAA GAAGGCGG ATTCTTTACTTGTAG TERM 931 861097 - 861079 - T 95 -14.6 -2.85056 | opp_overlap 861079 861078, overlap 861078 AGGGGCAAGTCAAAG CCGCCTTC TAA GAAGGCGG ATTCTTTACTTGTAG Shew185_0719 861965 - 861501 - | putative chemotaxis protein CheX Shew185_0720 862816 - 865008 + | TonB-dependent siderophore receptor TERM 932 865032 - 865049 + G 100 -12.7 -4.94487 | ATTAGTTAATGTTAC GGCAGCC CTCG GGCTGCC TTTTATGTTTTATAA TERM 933 865601 - 865618 + G 78 -9.1 -4.0641 | gap 1 ACGCCAGTCCTGTCG GGCGAGCG TAC CGC-CGCC TTTATGTGGCTGCAA Shew185_0721 865025 - 865783 + | putative hydroxylase TERM 934 865876 - 865899 + F 93 -9.7 -4.92239 | opp_overlap 865876 TGAAGGGCAATAAAA CAGTAAACG TTAACT CGTTTACTG TTTTTCCATTTTTAA TERM 935 865899 - 865876 - f 93 -9.7 -4.68103 | opp_overlap 865876 TGAAGGGCAATAAAA CAGTAAACG TTAACT CGTTTACTG TTTTTCCATTTTTAA Shew185_0722 866221 - 866706 + | hypothetical protein Shew185_0723 867500 - 867769 + | hypothetical protein Shew185_0724 867766 - 868296 + | GCN5-related N-acetyltransferase TERM 936 868320 - 868377 + F 83 -4.9 -5.2204 | overlap 868323 TCCCCGCCTTACCTG TCGTGCTGCTTATTCCTCACATTCGTG CATG CCTGAATGTGGTGAATAACCTGCATAA TTTTTGTTGCTTCTC TERM 937 868323 - 868374 + F 70 -8.8 -3.41572 | overlap 868320 CCGCCTTACCTGTCG TGCTGCTTATTCCTCACATTCGTG CATG CCTGAATGTGGTGAATAACCTGCA TAATTTTTGTTGCTT Shew185_0725 868852 - 869625 + | hypothetical protein Shew185_0726 869615 - 870019 + | hypothetical protein Shew185_0727 870032 - 870241 + | hypothetical protein TERM 938 870277 - 870261 - T 79 -9.4 -3.70007 | opp_overlap 870261, overlap 870257 AGTAGTTAAAATTAA GGCACC GTTTA GGTGCC TTTTGTATTTCTGGG TERM 939 870261 - 870277 + T 93 -9.4 -4.84918 | opp_overlap 870261 870257 AGTAGTTAAAATTAA GGCACC GTTTA GGTGCC TTTTGTATTTCTGGG Shew185_0728 870917 - 870597 - | GP46 Shew185_0729 871522 - 870914 - | hypothetical protein Shew185_0730 871749 - 871519 - | hypothetical protein Shew185_0731 872024 - 871746 - | hypothetical protein TERM 940 871926 - 871908 - G 73 -10.2 -3.20164 | opp_overlap 871908 871907 871913 GTACAGGCAATCTAA CGCGCCGA GCG CCAGCGCG ATTTTGATGCTGTCG Shew185_0732 872318 - 872025 - | hypothetical protein Shew185_0733 872696 - 872349 - | hypothetical protein TERM 941 872616 - 872640 + g 83 -8.6 -4.59853 | gap 1 TTGACGGCGGTTAGG GTGC-GCGCCT ACTG AGGTGCTGCAC TTTTTGGCCGCTTGA Shew185_0734 872982 - 872722 - | hypothetical protein Shew185_0735 873332 - 872979 - | hypothetical protein TERM 942 873366 - 873381 + H 80 -6.2 -4.77157 | opp_overlap 873366, overlap 873377 GGGCACAGGCCTAAA GATAAG TTAA CTTATC TTTTTCGTCAATTAG TERM 943 873797 - 873808 + H 81 -7.2 -4.60487 | opp_overlap 873797, overlap 873788 AATAGGTTTGGAAAA CGCG CATG CGCG TTTTTCCGGATGGTG TERM 944 873808 - 873797 - H 73 -7.2 -4.09511 | opp_overlap 873797 873788 AATAGGTTTGGAAAA CGCG CATG CGCG TTTTTCCGGATGGTG Shew185_0736 873943 - 874230 + | hypothetical protein Shew185_0737 874352 - 874777 + | GCN5-related N-acetyltransferase TERM 945 875756 - 875746 - g 71 -4 -4.70659 | GGTTAGATGCAAAAA CTTA CAG TAAG GAATCACTAAAGATT Shew185_0738 875505 - 876422 + | hypothetical protein Shew185_0739 877133 - 877423 + | SecC motif-containing protein Shew185_0740 878228 - 877506 - | putative phage repressor TERM 946 878131 - 878141 + g 80 -6.8 -4.68593 | opp_overlap 878131 878120 GAAACCCCAACTAAA GCAC CAA GTGC TTTTTGGGTGATACC Shew185_0741 878288 - 878491 + | hypothetical protein Shew185_0742 878523 - 879131 + | hypothetical protein Shew185_0743 879296 - 880045 + | putative replication protein Shew185_0744 880042 - 880728 + | replication P family protein TERM 947 881843 - 881876 + G 76 -9.7 -3.71148 | overlap 881848 TTGGATAAGGGTATG TTGAGTGCGCTTGAT GCGT ATCACGCGCATTTAA TTTCGCTCGGTTTTA TERM 948 881848 - 881871 + G 81 -9.6 -4.08485 | overlap 881843 TAAGGGTATGTTGAG TGCGCTTGAT GCGT ATCACGCGCA TTTAATTTCGCTCGG Shew185_0745 880718 - 881974 + | phage integrase family protein Shew185_0746 882030 - 882248 + | XRE family transcriptional regulator Shew185_0747 882235 - 882588 + | hypothetical protein Shew185_0748 882597 - 883211 + | oligoribonuclease TERM 949 883772 - 883787 + F 79 -10.4 -3.54459 | opp_overlap 883752, overlap 883759 CTTTTGTCGCTTTAT GCGGCA CATT TGCCGC TTTCAAGGCCCTTAA TERM 950 883870 - 883888 + F 100 -12.4 -5.27938 | TTATTTCTCTGCCAA GGGCTCCT TTT AGGGGCCC TTTTTATTTGGCGCT Shew185_0749 884132 - 884656 + | glycoside hydrolase family protein TERM 951 884988 - 884976 - g 91 -4.1 -5.626 | GACGCCATAAAAAAA CTAAG GAC CTCAG CCAATGAACAAACCC Shew185_0750 884646 - 885149 + | hypothetical protein Shew185_0751 885260 - 885595 + | hypothetical protein TERM 952 885863 - 885846 - gf 77 -2.6 -5.1971 | overlap 885848 ATTAAAAACGAAAAA GACCTC AAAGAA GTGGTC GAAGTTAATTTTGCT Shew185_0752 885549 - 886082 + | phage DNA packaging Nu1 TERM 953 886246 - 886230 - gf 70 -9.5 -2.72511 | overlap 886229 TTTACCGTTTCAAAT TGGCATT CTT AATGCCA TGGGTAATGACCAAA Shew185_0753 886057 - 888054 + | phage terminase GpA Shew185_0754 888084 - 888290 + | hypothetical protein TERM 954 888533 - 888518 - gf 73 -6.8 -4.18018 | opp_overlap 888519 TTGCGGCAGGTAAAA GCCTGC GTGA GCAAGC GCGCTGGTTAGATGA Shew185_0755 888340 - 889914 + | lambda family phage portal protein TERM 955 890408 - 890363 - gf 72 -9 -3.41745 | TTGTCAGAAGATGAA CTCCACGCTCTGTTAGCC GCTGAAACTT GGCTAACTGGGCGCGAAG CAGTGGAAAAAGGTT Shew185_0756 889886 - 891901 + | peptidase S14 ClpP TERM 956 891957 - 891938 - f 91 -10.8 -4.59773 | opp_overlap 891938 CTCCACTGTTAAAAA TGGCTATC AATC GATAGCCA TTTTTCTAAGTCTTG TERM 957 891938 - 891957 + F 93 -10.8 -4.91459 | opp_overlap 891938 CTCCACTGTTAAAAA TGGCTATC AATC GATAGCCA TTTTTCTAAGTCTTG Shew185_0757 891995 - 892318 + | gifsy-2 prophage; putative RecA/RadA recombinase Shew185_0758 892311 - 892676 + | hypothetical protein Shew185_0759 892679 - 893236 + | hypothetical protein Shew185_0760 893270 - 893695 + | hypothetical protein TERM 958 893959 - 893942 - g 70 -9.9 -3.19091 | AGATTGATGTATTAA CTGCAAC ACCC GTTGCAG ATGAAAAAATTATCG Shew185_0761 893692 - 894411 + | hypothetical protein TERM 959 894446 - 894423 - f 79 -11.1 -3.18536 | opp_overlap 894427, overlap 894421 894412 894427 ATAAGTAATGTAACA GCAAGCTCA TGCAAT TGAGCTTGC TTACCCTACTTGCAC TERM 960 894686 - 894676 - g 79 -2.4 -5.40474 | AGTGTCGTAAAAAAA CGGG TAC CCAG ATTAAATCAAGGTAA Shew185_0762 894535 - 894921 + | hypothetical protein Shew185_0763 894905 - 895210 + | Cro/CI family transcriptional regulator-related protein TERM 961 895236 - 895279 + T 83 -12.6 -2.83071 | opp_overlap 895248, overlap 895248 AAGTCAGACAACAGT GCAAACAAAAAATGGCTACC AAAC GGTAGCCATTTTTTATGGGC GTTTAACTGTCACTT TERM 962 895248 - 895267 + T 100 -12.2 -5.25803 | opp_overlap 895248, overlap 895236 AGTGCAAACAAAAAA TGGCTACC AAAC GGTAGCCA TTTTTTATGGGCGTT TERM 963 895267 - 895248 - T 100 -12.2 -5.64421 | opp_overlap 895248 895236 AGTGCAAACAAAAAA TGGCTACC AAAC GGTAGCCA TTTTTTATGGGCGTT Shew185_0764 895878 - 895294 - | Rha family phage regulatory protein TERM 964 895692 - 895715 + g 84 -13.2 -2.54896 | overlap 895688 CCTGTTGATTTTGCA CGTTAGCCCA AAAA TGGGCTGACG TAAATTCACTGGGAG TERM 965 896057 - 896043 - H 93 -7.1 -5.4833 | opp_overlap 896056 TCACGCAATAAAAAA CCAGC ACTAG GCTGG CGACATGATTGCGCC TERM 966 896278 - 896309 + H 89 -10.2 -4.26344 | opp_overlap 896278, overlap 896279 AGTTTACAAACTAAT TGGTTGTGGTCGAG ACAT TTCGATCACAGCCG TTTTCGTGCGCGTGT TERM 967 896279 - 896308 + H 82 -11.5 -3.15324 | opp_overlap 896278, overlap 896278 GTTTACAAACTAATT GGTTGTGGTCGAG ACAT TTCGATCACAGCC GTTTTCGTGCGCGTG TERM 968 896477 - 896467 - g 74 -6.8 -4.35524 | overlap 896468 896476 GCGCGAAAGCGAAAA GCTC AAC GAGC AGCTTGATGAGCTCA TERM 969 896664 - 896651 - g 71 -4.5 -4.60487 | GAGCAGGCGCAAAAA GAGGC GGCA ACCTC AACCAGTAAACTGGA TERM 970 897109 - 897094 - g 79 -10.4 -3.78034 | TATTGATATGAACAA GCTGGC TGAT GCCAGC AAAGACTTAAAGACC TERM 971 898434 - 898424 - g 71 -8.2 -3.69283 | GAAGCGAGTCAACAA GCGG TGG CCGC GGCCGAAAAAGCCAA TERM 972 898558 - 898528 - g 100 -11.2 -5.15634 | CACCGCATTAAAAAA CTCAGGTACAGCAA CCC TTGCTGAACTTGAG GCGGCGCAGATCCAA TERM 973 899585 - 899567 - g 71 -6.7 -4.27886 | gap 1, overlap 899568 CTTGAAACAGAGAAA GC-CGGCA AGAT TGCCGAGC GCGCCTATTATCGCC TERM 974 899904 - 899887 - g 76 -9.9 -3.64822 | opp_overlap 899900, overlap 899870 AGTCGCCGACCTAAA GCAGCAA CTTG TTGCTGC TGAACGTACAGGTGA Shew185_0765 896354 - 900274 + | phage tail tape measure protein, TP901 family Shew185_0766 900313 - 900684 + | hypothetical protein TERM 975 902422 - 902437 + G 72 -6 -4.33153 | opp_overlap 902420 902416, overlap 902423 CCAAACTTACAACGC TCGCGC CAAT GCGCGC TTTGTTGATATTACC TERM 976 902423 - 902436 + G 70 -9.5 -3.19169 | opp_overlap 902420 902416, overlap 902422 CAAACTTACAACGCT CGCGC CAAT GCGCG CTTTGTTGATATTAC Shew185_0767 900692 - 903130 + | hypothetical protein TERM 977 903276 - 903263 - g 77 -6.7 -4.61231 | GGATATGGTGAAAAA CAACC ACTT GGTTG GACACTTGACTTTGA TERM 978 903328 - 903311 - g 71 -4.9 -4.56978 | overlap 903307 903325 GCTGCAAACAATAAA GTTGTCT TTAA AAACAAC GTTGCCGATGGTGGT Shew185_0768 903143 - 904087 + | hypothetical protein Shew185_0769 904080 - 904385 + | hypothetical protein Shew185_0770 904382 - 906142 + | hypothetical protein TERM 979 906270 - 906233 - g 79 -11.3 -3.53091 | gap 1, overlap 906234 AGTCGCTGCCGTAAA CGCCGATGGCACTG-TGA CAG CCAGCAGTGCCAGCGGCC ACACTATCCGCGCCA TERM 980 906269 - 906234 - g 90 -14.8 -2.71712 | gap 1, overlap 906233 GTCGCTGCCGTAAAC GCCGATGGCACTG-TGA CAG CCAGCAGTGCCAGCGGC CACACTATCCGCGCC Shew185_0771 906168 - 906380 + | hypothetical protein Shew185_0772 906415 - 907065 + | hypothetical protein TERM 981 907072 - 907093 + T 71 -5.1 -4.62803 | opp_overlap 907073, overlap 907073 907081 AGTTCATAAATAGAG AGGATGCAG TAAA TTGCATCCA TTTATTATTGTTTAG TERM 982 907073 - 907092 + T 70 -8.6 -3.36055 | opp_overlap 907073, overlap 907072 907081 GTTCATAAATAGAGA GGATGCAG TAAA TTGCATCC ATTTATTATTGTTTA Shew185_0773 908180 - 907116 - | phage integrase family protein Shew185_0774 908302 - 909321 + | tRNA-dihydrouridine synthase A Shew185_0775 909531 - 909821 + | hypothetical protein Shew185_0776 909966 - 910166 + | phage shock protein C, PspC Shew185_0777 911042 - 910305 - | enoyl-CoA hydratase/isomerase Shew185_0778 911076 - 911558 + | hypothetical protein TERM 983 911722 - 911701 - g 70 -2.2 -4.87665 | opp_overlap 911702, overlap 911702 GGCTACCGATAAAAA TGTGGTCG GATACG CAACCACC ACTTCGCTGATCCTC Shew185_0779 911570 - 912538 + | hypothetical protein Shew185_0780 912541 - 913278 + | hypothetical protein TERM 984 913293 - 913340 + T 90 -10.3 -4.42386 | opp_overlap 913310, overlap 913310 ATCTGTTGATTTAGC GTT-TGAGTATAAAAAAACCGCC TATC GGCGGTTTTTTTAT-CTGACAAC TTTTATAGCTGAGAA TERM 985 913323 - 913310 - T 100 -9.5 -5.67063 | opp_overlap 913293 913310 TTGAGTATAAAAAAA CCGCC TATC GGCGG TTTTTTTATCTGACA TERM 986 913310 - 913323 + T 100 -9.5 -5.71712 | opp_overlap 913310, overlap 913293 TTGAGTATAAAAAAA CCGCC TATC GGCGG TTTTTTTATCTGACA Shew185_0781 914675 - 913368 - | outer membrane channel protein TERM 987 914984 - 914970 - g 91 -2.1 -5.94713 | opp_overlap 914972, overlap 914971 914972 ATCTTAGAAAAAAAA TCCCT TTACC AAGGA TTTTTCTCAATGGAC Shew185_0782 914919 - 915521 + | NUDIX hydrolase Shew185_0783 915528 - 915968 + | hypothetical protein Shew185_0784 915984 - 916823 + | calcineurin phosphoesterase domain-containing protein Shew185_0785 916850 - 917425 + | hypothetical protein TERM 988 917810 - 917793 - g 75 -3.3 -5.06816 | opp_overlap 917793, overlap 917796 ATTTTCGAATAAAAA CTACCAG TTCT CTGGCGG TTTGCATGGTGTGGG TERM 989 918846 - 918819 - g 71 -8.5 -3.76413 | opp_overlap 918821 TGGGAAAATCTTAAA CACTTGGGAAG TTGATG CTTCACAAGTG TTAGCCTCGCAGGAA Shew185_0786 917482 - 919368 + | DNA topoisomerase IV subunit B Shew185_0787 919423 - 920595 + | L-sorbosone dehydrogenase, putative Shew185_0788 920588 - 922864 + | DNA topoisomerase IV subunit A TERM 990 922866 - 922882 + T 71 -6.6 -4.11484 | opp_overlap 922865 TACCGAGCATTTAAT CCTTGA TGGAC TCAAGG TTTTGAAGCATTAAA TERM 991 922911 - 922934 + T 100 -9.6 -5.98675 | opp_overlap 922902 922909 922911 AAGACATAAATGAGA GCCATCTAAG TTGA CTTGGGTGGC TTTTTTGTTTTTATC TERM 992 922992 - 923013 + T 100 -11.7 -4.9755 | opp_overlap 922992 CGAGACATAAAAAAA CCTACTGTA TCGC TACAGTAGG TTTTTAATTATCTCT TERM 993 923013 - 922992 - T 100 -11.7 -5.76633 | opp_overlap 922992 CGAGACATAAAAAAA CCTACTGTA TCGC TACAGTAGG TTTTTAATTATCTCT Shew185_0789 924080 - 923040 - | porin TERM 994 923688 - 923699 + g 71 -7.2 -3.98075 | opp_overlap 923684 ACCGAAAATATCCAC GCCG CCTT CGGC TTGTTTGAATACTGT TERM 995 924112 - 924124 + r 72 -3.4 -5.06585 | AACCTAAGTTCTTTT CCAT TTTTC ATGG TTTTTGTGTGGTTTA TERM 996 924478 - 924453 - R 73 -10.5 -2.77658 | opp_overlap 924459, overlap 924459 GATGATATCTAAGCA GAAAAAGCGGC CGAA GCCGCTTTTTT ATCAAGAAATAACCT TERM 997 924472 - 924459 - R 93 -9.5 -4.98857 | opp_overlap 924459, overlap 924453 ATCTAAGCAGAAAAA GCGGC CGAA GCCGC TTTTTTATCAAGAAA TERM 998 924459 - 924472 + r 100 -9.5 -5.24129 | opp_overlap 924459 924453 ATCTAAGCAGAAAAA GCGGC CGAA GCCGC TTTTTTATCAAGAAA Shew185_0790 925580 - 924516 - | porin Shew185_0791 926007 - 926816 + | UBA/THIF-type NAD/FAD binding protein TERM 999 926866 - 926843 - T 76 -11 -2.61264 | opp_overlap 926842 926862, overlap 926842 TTTTCTACCCATAAT TTCACCGCTC GTAT GAGCGGTGAG TATCACTTCAATATT Shew185_0792 928534 - 926903 - | integral membrane sensor signal transduction histidine kinase TERM 1000 927417 - 927432 + g 71 -4.7 -4.4874 | TGTTCTTCATGACTG CGATC TATGGC GATCG TTTTGAATTTTTGGA TERM 1001 929128 - 929117 - g 81 -5.8 -4.85599 | TGCATCTTAGAAAAA CTCG GTAA CGAG CGCCATTATGCGATT Shew185_0793 928703 - 929314 + | hypothetical protein TERM 1002 929319 - 929303 - T 77 -5.1 -4.94487 | opp_overlap 929303, overlap 929298 GTACAAAACAGAAAA CACGC TGCATAG GCGTG TTTTGTCTCGCTCGG TERM 1003 929303 - 929319 + T 73 -5.8 -4.55287 | opp_overlap 929303 929298 GTACAAAACAGAAAA CACGCT GCATA GGCGTG TTTTGTCTCGCTCGG TERM 1004 929410 - 929390 - T 85 -3.9 -5.60689 | opp_overlap 929392, overlap 929391 CGAGACAACAAAAAA TGGGGGT GATAAAA ACCCCCC TAGATTTTGCATTTA TERM 1005 929409 - 929391 - T 71 -7.4 -3.94787 | opp_overlap 929392, overlap 929390 GAGACAACAAAAAAT GGGGGT GATAAAA ACCCCC CTAGATTTTGCATTT Shew185_0794 929589 - 929458 - | hypothetical protein Shew185_0795 929904 - 931493 + | methyl-accepting chemotaxis sensory transducer TERM 1006 931685 - 931665 - T 81 -11.9 -2.90714 | overlap 931667 TGAAATCGGTAGACA CACGGGATT CAA AATCCCGCG CCCTTAAAAGCGTGC TERM 1007 931683 - 931667 - T 78 -10.9 -3.00215 | overlap 931665 AAATCGGTAGACACA CGGGATT CAA AATCCCG CGCCCTTAAAAGCGT TERM 1008 931765 - 931751 - T 73 -7.1 -4.01419 | opp_overlap 931751 GATGAAGGAACTAAA CCGAC TTAGC GTCGG TTTTTTTGTACCTGA TERM 1009 931751 - 931765 + T 100 -7.1 -5.64274 | opp_overlap 931751 GATGAAGGAACTAAA CCGAC TTAGC GTCGG TTTTTTTGTACCTGA Shew185_0796 932885 - 931800 - | molybdate transporter ATP-binding protein TERM 1010 932471 - 932486 + g 75 -5.4 -4.82901 | TGAGCAGGGCACGGC CAATGG CAAC CCGTTG TTTTTCTCCGCCCGA TERM 1011 932895 - 932908 + r 76 -4.5 -5.14563 | overlap 932889 TAACATACGCTTGCC GTCCT CTGC AGGGC TTTTTTACTCAGCCA Shew185_0797 933601 - 932879 - | molybdate ABC transporter permease protein TERM 1012 933423 - 933387 - G 73 -10.2 -3.10894 | gap 1, overlap 933391 ATCAGCAGGAGGTAA CCCA-CTACCACGGGCG GTAA CACCAGTGGTAGATGGA GTACACTATCGAATA TERM 1013 933418 - 933391 - G 78 -12 -2.55544 | overlap 933387 GCAGGAGGTAACCCA CTACCACGGGCG GTAA CACCAGTGGTAG ATGGAGTACACTATC Shew185_0798 934409 - 933618 - | molybdenum ABC transporter, periplasmic molybdate-binding protein Shew185_0799 934615 - 935394 + | ModE family transcriptional regulator TERM 1014 935469 - 935484 + F 85 -5.4 -5.20783 | TGGCGTTATTGTTGT CGAATG GGAT CGTTCG TTTTTGTATTTAAAT Shew185_0800 935835 - 937085 + | RND family efflux transporter MFP subunit TERM 1015 938411 - 938395 - g 79 -10.1 -3.62597 | opp_overlap 938392 938395 TGCAGGCGCGAATAA CTCGGCC ATC GGCCAAG TGATTTTCCTCGGGG Shew185_0801 937088 - 939091 + | ABC transporter related TERM 1016 940201 - 940177 - g 70 -7.9 -3.89336 | opp_overlap 940177, overlap 940171 GGAATCAAATGCAAA TCAATAACGAC ATT GCCGATATTGA TTATCAAACCGCTGT TERM 1017 940422 - 940432 + G 71 -8.2 -3.73224 | opp_overlap 940412 GAGAATCGTCGCAGC GCCG AGG CGGC TTTGCTCGAGAATCG Shew185_0802 939099 - 940529 + | RND efflux system outer membrane lipoprotein TERM 1018 940567 - 940594 + T 79 -10 -3.58698 | opp_overlap 940567 940573, overlap 940567 940573 AGCACTATAGAAAAA CAAAAACCGCTA TTAA TAGCGGTTTTTC GTTTTTATATAACTC TERM 1019 940567 - 940595 + T 93 -9.8 -4.99035 | gap 1, opp_overlap 940567 940573, overlap 940567 940573 AGCACTATAGAAAAA C-AAAAACCGCTA TTAA TAGCGGTTTTTCG TTTTTATATAACTCA TERM 1020 940594 - 940567 - T 93 -10 -5.01497 | opp_overlap 940567 940567 940573, overlap 940573 AGCACTATAGAAAAA CAAAAACCGCTA TTAA TAGCGGTTTTTC GTTTTTATATAACTC TERM 1021 940588 - 940573 - T 100 -9 -5.71295 | opp_overlap 940567 940567 940573, overlap 940567 ATAGAAAAACAAAAA CCGCTA TTAA TAGCGG TTTTTCGTTTTTATA TERM 1022 940573 - 940588 + T 93 -9 -5.2197 | opp_overlap 940573 940567, overlap 940567 940567 ATAGAAAAACAAAAA CCGCTA TTAA TAGCGG TTTTTCGTTTTTATA Shew185_0803 941812 - 940670 - | peptidase M50 TERM 1023 941564 - 941580 + g 77 -3 -5.23292 | overlap 941559 CCAAACGAGATCGGT TTCGAG GCGAA CTTGAA TTTTATTTTCTGTCA Shew185_0804 942414 - 942037 - | hypothetical protein TERM 1024 942634 - 942610 - R 80 -10.7 -3.27298 | TGGCTTAATGAGGAA GGCGTGACGAC TGA GTCATCACTCC TAGCCAAGATTATGC Shew185_0805 944332 - 942644 - | hypothetical protein Shew185_0806 945858 - 944815 - | rRNA (guanine-N(2)-)-methyltransferase TERM 1025 945240 - 945224 - G 80 -8.7 -4.4078 | overlap 945228 GCGCCGCAACCAAAA TCGAGCA CTC TGCCCGA GAGTGTCGGTAGGTG TERM 1026 946004 - 945982 - R 100 -12 -5.49234 | opp_overlap 945982 945982 AGACCCAATAAAAAA GGCAACTGCA TTA TGCGGTTGCC TTATGTGATTGCCTT TERM 1027 945982 - 946004 + r 100 -14.2 -3.61062 | opp_overlap 945982, overlap 945982 AGACCCAATAAAAAA GGCAACTGCA TTA TGCGGTTGCC TTATGTGATTGCCTT Shew185_0807 947362 - 946043 - | alkaline phosphatase TERM 1028 946970 - 946984 + g 77 -6.4 -4.65168 | GACACCTGTGCTAAG GCCAAG GGA TTTGGC TTTTTCGAGTATGGT Shew185_0808 948390 - 947437 - | glutathione synthetase TERM 1029 948463 - 948478 + r 73 -10.4 -2.76492 | overlap 948462 GGTCTGTCATGCCAG CGCAGC TTGG GCTGCG GTTTAGCCTAAATCA Shew185_0809 949212 - 948481 - | hypothetical protein Shew185_0810 949997 - 949221 - | deoxyribonuclease I TERM 1030 950025 - 950042 + r 80 -7.7 -4.40804 | gap 1, opp_overlap 950024, overlap 950026 AATAACAAACACTAC G-CGAGCC TTT GGCTCGTC TTTTATGGCGTGATG TERM 1031 950026 - 950040 + r 90 -11.4 -3.80877 | opp_overlap 950024, overlap 950025 ATAACAAACACTACG CGAGCC TTT GGCTCG TCTTTTATGGCGTGA Shew185_0811 950830 - 950171 - | protein of unknown function DUF335 SprT Shew185_0812 952274 - 951105 - | hypothetical protein TERM 1032 952837 - 952801 - g 80 -4.9 -5.12707 | opp_overlap 952808, overlap 952805 CTAAACCGCAAAAAA CTAAGCCCCAACAAGCC TCG GGCGTGGTGGTGCTGTG GAACGAAAACAAGCA TERM 1033 952833 - 952805 - g 73 -8.7 -3.93769 | opp_overlap 952808, overlap 952801 ACCGCAAAAAACTAA GCCCCAACAAGCC TCG GGCGTGGTGGTGC TGTGGAACGAAAACA Shew185_0813 952608 - 953495 + | Beta-lactamase TERM 1034 953590 - 953609 + T 86 -4.3 -5.4756 | opp_overlap 953590 ATCGTGATGCTAAAA GCTTAGA CTCAGA TCTAGGC TTTTTTATTAGGCTT Shew185_0814 954571 - 953660 - | LysR family transcriptional regulator TERM 1035 956963 - 956987 + G 76 -10.7 -3.17941 | TGCATTCGATATGGC CAGTGCCGAGA AAT TCTCAGCGCTG TTGATCGAGTGTGCT TERM 1036 958086 - 958066 - g 74 -3.1 -5.0538 | opp_overlap 958070, overlap 958077 GTCTATTCCAAAAAA CTGCGACTG AAG CGGCTGCAG CCTTTGGTAACGGTG TERM 1037 959054 - 959040 - g 79 -10 -3.9122 | GATTTCGTGAAAGAA GGTGAC ATA GTCACC GTCGATCAAACGCTA Shew185_0815 954693 - 959246 + | carbamoyl-phosphate synthase L chain ATP-binding TERM 1038 959299 - 959281 - f 100 -14.6 -5.38497 | opp_overlap 959281 AGCTAAATGAAAAAA TACCCGCC ACT GGCGGGTA TTTTTTTAGCATTGT TERM 1039 959281 - 959299 + F 100 -14.6 -5.48303 | opp_overlap 959281 AGCTAAATGAAAAAA TACCCGCC ACT GGCGGGTA TTTTTTTAGCATTGT TERM 1040 959866 - 959832 - f 75 -10.1 -3.19192 | TGGCACTTAATTCAA TCGCAGCAAGAAGTT GAAAA AACTCCTTGACGCGA AACGGGAAATGCGTA TERM 1041 959890 - 959876 - f 73 -8.6 -3.71917 | ACGCGAAACGGGAAA TGCGTA GAA TACGCA GCCCTAGCCAACTGG TERM 1042 961989 - 961962 - f 72 -4.3 -4.74706 | TTGAATATTCAAAAA GTAAATTATTC TTTGCT GAATAGTTTAC GTCTAAGGCGCGTCC TERM 1043 962053 - 962083 + F 90 -13.4 -2.90194 | opp_overlap 962041 962040 962036, overlap 962056 962062 AAGCTGGTCGCAATG CGACCCAGGTGAGT GAA ACTCATTTGGGTTG TATGGTTAAGCGACT TERM 1044 962056 - 962080 + F 88 -11.5 -3.59946 | opp_overlap 962041 962040 962036, overlap 962053 962062 CTGGTCGCAATGCGA CCCAGGTGAGT GAA ACTCATTTGGG TTGTATGGTTAAGCG TERM 1045 962571 - 962559 - f 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 1046 963367 - 963351 - f 86 -9.4 -4.08546 | overlap 963364 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 1047 963884 - 963873 - f 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GCAC TGTG CAAACTCGCAAGAGG TERM 1048 965130 - 965119 - f 73 -2.2 -5.18866 | CTCAAACAAAGAAAA TCAG CTTT CCGA ATTATTATTAACGTG TERM 1049 965310 - 965359 + F 88 -11 -4.02132 | gap 1, opp_overlap 965305 965325, overlap 965325 965352 CGCCTAATTATCTCA TTG-AGATGTAACGAAGCCAGCT GAATA AGCTGGCTTTTTTGCGTCTGCAA TTTGTCAATTTCAGC TERM 1050 965343 - 965325 - f 77 -10.3 -3.39142 | opp_overlap 965325 965310 TTGAGATGTAACGAA GCCAGCT GAATA AGCTGGC TTTTTTGCGTCTGCA TERM 1051 965325 - 965343 + F 93 -10.3 -5.1287 | opp_overlap 965325, overlap 965310 TTGAGATGTAACGAA GCCAGCT GAATA AGCTGGC TTTTTTGCGTCTGCA TERM 1052 965513 - 965494 - f 73 -5.6 -4.6468 | opp_overlap 965494 965492 TGAAATCAGAGAAAA GCGCACGC AAAC GTATGCGC TATCTTGCCTTACTT TERM 1053 967966 - 967980 + F 72 -8.6 -3.53012 | TCTCGTTCATGGGCT TATCGC TGC GCGATA TTTCACCCGCCAACA TERM 1054 968035 - 968000 - f 76 -7.6 -4.19177 | opp_overlap 968007, overlap 968006 968007 ACCCGCCAACATAAA GATGAAGGCCTCTACA GCAA TGTAGAGGCTTTTTTC GTTTCGGCATATTAG TERM 1055 968029 - 968006 - f 77 -9.6 -3.54129 | opp_overlap 968007, overlap 968000 968007 CAACATAAAGATGAA GGCCTCTACA GCAA TGTAGAGGCT TTTTTCGTTTCGGCA TERM 1056 968028 - 968007 - f 90 -13.1 -2.71393 | opp_overlap 968007, overlap 968006 968000 AACATAAAGATGAAG GCCTCTACA GCAA TGTAGAGGC TTTTTTCGTTTCGGC TERM 1057 968007 - 968028 + F 100 -13.1 -5.37593 | opp_overlap 968007 968006 968000 AACATAAAGATGAAG GCCTCTACA GCAA TGTAGAGGC TTTTTTCGTTTCGGC TERM 1058 968202 - 968215 + F 71 -3.8 -4.89521 | AGTGATACTAAGCTT CCTC ACTCAA GAGG TTTTCTTTCCAGTCT Shew185_0819 968330 - 969853 + | diguanylate cyclase Shew185_0820 970294 - 972387 + | elongation factor G TERM 1059 972457 - 972430 - T 95 -11.2 -5.10461 | opp_overlap 972430 GTTAGCTAATAAAAA CCGCTGTCGGCC CCTA GGCTCACAGCGG TTTTTTTATGGGTGA TERM 1060 972430 - 972457 + T 100 -13.4 -5.64274 | opp_overlap 972430 GTTAGCTAATAAAAA CCGCTGTCGGCC CCTA GGCTCACAGCGG TTTTTTTATGGGTGA Shew185_0821 973471 - 972584 - | LysR family transcriptional regulator Shew185_0822 973565 - 973717 + | hypothetical protein TERM 1061 973728 - 973703 - T 71 -6.1 -4.27914 | opp_overlap 973708, overlap 973700 973708 AAAGCAAAACAACAA GTAAACCCAGC CTAG GCTGGGTTTTT ACTTTTCTGCGTTTT TERM 1062 973708 - 973723 + T 93 -10.4 -5.1417 | opp_overlap 973703 973700 973708 AAAACAACAAGTAAA CCCAGC CTAG GCTGGG TTTTTACTTTTCTGC TERM 1063 973723 - 973708 - T 89 -10.4 -4.18711 | opp_overlap 973708, overlap 973703 973700 AAAACAACAAGTAAA CCCAGC CTAG GCTGGG TTTTTACTTTTCTGC TERM 1064 973960 - 973938 - T 93 -9.1 -5.32699 | opp_overlap 973938 TTAAATAGTAAAAAA GCCACCCTA TAAAC TCGGGTGGC TTTGCTCTGCAGGGG TERM 1065 973938 - 973960 + T 79 -9.1 -3.83026 | opp_overlap 973938 TTAAATAGTAAAAAA GCCACCCTA TAAAC TCGGGTGGC TTTGCTCTGCAGGGG Shew185_0823 974415 - 973984 - | nitrate reductase cytochrome c-type subunit (NapB) TERM 1066 974150 - 974167 + g 71 -2.6 -4.9792 | opp_overlap 974150 GCCTTGTCCCAACTA TGGCAG CTTAAA CAGCCA TTTTTATCTAAGGTG Shew185_0824 976907 - 974412 - | nitrate reductase TERM 1067 974555 - 974543 - G 71 -9.1 -3.55592 | opp_overlap 974546 974548 974554, overlap 974533 974541 974546 AGAAGGGCATAAATA CCACG CCG CGTGG CGGTTTGTTACGGCC TERM 1068 974548 - 974558 + g 77 -8.2 -4.17132 | opp_overlap 974533 974543 974541 974546, overlap 974546 974554 GGCATAAATACCACG CCGC GTG GCGG TTTGTTACGGCCTTT TERM 1069 974600 - 974633 + g 75 -10.3 -3.28712 | gap 1, overlap 974593 974628 974628 GGGTTTTCACTTCAC CGC-GCGGTGAGGCTA CTA TGACCTCATCGCCGCG TTGTACACCGCGGGC TERM 1070 974892 - 974914 + g 78 -7.6 -4.46233 | opp_overlap 974863 974905 974906 GACATAAGGGTCGCT CCCTTCTACG AAA CGGCGAAGGG TTTCTTTGCCATTAA TERM 1071 975287 - 975311 + g 76 -8.6 -4.06419 | gap 2 GCCATAGGTGAGTAC GGCGC-T-CGGC ATT GCCGTAAGCGCC TTCTTTCTCGACCCA Shew185_0825 977173 - 976904 - | NapD family protein TERM 1072 977391 - 977415 + r 90 -13 -2.74019 | TGAGGTGTGTTGTAC TTGGCCGTAT ATGGG ATACGGCCAA TAATTCAAGATTATA Shew185_0826 979069 - 977426 - | hypothetical protein TERM 1073 978696 - 978729 + g 73 -2.4 -5.09204 | gap 1 AAGTGTTGCCCTGTG CTGTTGACGCTGAGT TCGGC GCTCGGGGTCA-CGG TTTTTGTTAACGTAT TERM 1074 979084 - 979096 + r 79 -9.1 -3.85209 | TGTCTGTGCTTCCTC GTGCC TAT GGCAC TTGTTGTGAATTAAT Shew185_0827 979657 - 979088 - | prepilin-type cleavage/methylation-like protein TERM 1075 979235 - 979257 + g 73 -8.4 -3.91144 | TTGAGAGAAGTGAGC CGCTTCTAGC CCA GTGAGAAGCG TTTGTGCACTATCAC Shew185_0828 980070 - 979660 - | prepilin-type cleavage/methylation-like protein Shew185_0829 980504 - 980067 - | methylation site containing protein Shew185_0830 980885 - 980505 - | methylation site containing protein Shew185_0831 982405 - 981203 - | hypothetical protein Shew185_0832 985071 - 982402 - | hypothetical protein TERM 1076 984591 - 984609 + g 78 -5.2 -4.87786 | overlap 984583 TTGACTGCGTTTCAG TCGAGGCG TGA CTTCTCGA TTTTTGTAGCGTTAA Shew185_0833 985771 - 985061 - | ABC transporter related TERM 1077 986213 - 986198 - H 71 -4 -4.96501 | gap 1 TCCCATAAAAACAAA GCACTCT TTC AG-GTGC CGATAGGCGTGGACT Shew185_0834 986626 - 987984 + | amino acid carrier protein TERM 1078 988062 - 988112 + F 76 -10.8 -2.71712 | overlap 988061 TCGCCACTGGATTCT TCGTTTACTTTATATGCACTATTT AAA AAATAGTGCATATAAAATCGAGGA CTTTAGGGCGACGCC Shew185_0835 988128 - 993476 + | multi-sensor hybrid histidine kinase Shew185_0836 993525 - 994541 + | response regulator receiver modulated metal dependent phosphohydrolase TERM 1079 994633 - 994609 - T 90 -12.9 -2.86203 | opp_overlap 994610 994614, overlap 994614 TGAGTATAAGATAAG CTAAAGGCGCC ATT GGCGCCTTTAT ACTGTTTCAATCTCT TERM 1080 994610 - 994632 + T 100 -16.4 -2.86838 | opp_overlap 994609 994614, overlap 994614 GAGTATAAGATAAGC TAAAGGCGCC ATT GGCGCCTTTA TACTGTTTCAATCTC TERM 1081 994628 - 994614 - T 93 -12.8 -3.86112 | opp_overlap 994610 994614, overlap 994609 ATAAGATAAGCTAAA GGCGCC ATT GGCGCC TTTATACTGTTTCAA TERM 1082 994614 - 994628 + T 93 -12.8 -4.1043 | opp_overlap 994614 994609, overlap 994610 ATAAGATAAGCTAAA GGCGCC ATT GGCGCC TTTATACTGTTTCAA Shew185_0837 995635 - 994673 - | glycine cleavage T protein (aminomethyl transferase) TERM 1083 995253 - 995238 - G 73 -7.6 -4.09739 | TGAATGTCGCCAAAA TGTTCG CTCA CGAACA GGCTTGCTTGTTCAC TERM 1084 995698 - 995749 + r 84 -10.4 -3.90744 | gap 1, opp_overlap 995703 995706 995709, overlap 995703 995706 GAATTCCTGTTGGCT CAAAAGCATAAGGCGCACATATC TATGAAT GATATGTGCGCCTCA-GTCTTTG TTCTTTAGCCAAAAC TERM 1085 995745 - 995703 - R 90 -11.4 -4.07568 | opp_overlap 995703 995698 995706, overlap 995706 995709 CCTGTTGGCTCAAAA GCATAAGGCGCACATATC TATGAAT GATATGTGCGCCTCAGTC TTTGTTCTTTAGCCA TERM 1086 995703 - 995745 + r 88 -9.2 -4.56978 | opp_overlap 995703 995706 995709, overlap 995698 995706 CCTGTTGGCTCAAAA GCATAAGGCGCACATATC TATGAAT GATATGTGCGCCTCAGTC TTTGTTCTTTAGCCA TERM 1087 995742 - 995706 - R 100 -16.1 -3.08032 | opp_overlap 995706 995703 995698, overlap 995703 995709 GTTGGCTCAAAAGCA TAAGGCGCACATATC TATGAAT GATATGTGCGCCTCA GTCTTTGTTCTTTAG TERM 1088 995706 - 995742 + r 93 -13.9 -2.92335 | opp_overlap 995703 995706 995709, overlap 995703 995698 GTTGGCTCAAAAGCA TAAGGCGCACATATC TATGAAT GATATGTGCGCCTCA GTCTTTGTTCTTTAG TERM 1089 995739 - 995709 - R 100 -15.6 -3.68359 | opp_overlap 995706 995703 995698, overlap 995706 995703 GGCTCAAAAGCATAA GGCGCACATATC TATGAAT GATATGTGCGCC TCAGTCTTTGTTCTT Shew185_0838 997041 - 995812 - | D-3-phosphoglycerate dehydrogenase TERM 1090 996605 - 996617 + g 71 -6.9 -4.25104 | CCGCGCACTTCGTAG CTGCC AGC GGCGG TTTTCATCCAGCCAC TERM 1091 997305 - 997321 + G 71 -2.9 -5.00616 | overlap 997304 997301 CGGCTCCCGCATTAG TGGCTGT GCC ACTGCTA TTTTTTACCCGCAAA Shew185_0839 997196 - 997804 + | hypothetical protein TERM 1092 997873 - 997897 + F 85 -8.6 -4.46854 | opp_overlap 997873 AAGCTTCTAACATGA GTGTGATGGC ATTTA GCTGTCACAC TTTCTTATTGCCTGC Shew185_0840 998201 - 998866 + | response regulator receiver protein TERM 1093 998984 - 998957 - T 100 -17.2 -4.69415 | opp_overlap 998957 ATCAATATAAATAAA GCGGGAATGTTT AAAT AAACATTCCCGC TTTTTGTTTGATTGC TERM 1094 998957 - 998984 + T 100 -17.2 -5.38326 | opp_overlap 998957 ATCAATATAAATAAA GCGGGAATGTTT AAAT AAACATTCCCGC TTTTTGTTTGATTGC Shew185_0841 1000542 - 999052 - | curlin-associated protein Shew185_0842 1000976 - 1000557 - | curlin-associated protein TERM 1095 1001471 - 1001489 + r 86 -11.8 -3.40867 | opp_overlap 1001471 TGATGAGTAGAAAAA TTCGACCA TAG TGGTCGAA TTCCTTGGTGAATGA TERM 1096 1001489 - 1001471 - R 100 -11.8 -4.93296 | opp_overlap 1001471 TGATGAGTAGAAAAA TTCGACCA TAG TGGTCGAA TTCCTTGGTGAATGA Shew185_0843 1002065 - 1001553 - | hypothetical protein TERM 1097 1002281 - 1002292 + r 74 -4.4 -4.87893 | TTTACTGCGTTTATT GTTG CGGT CAAC TTTTTACTTAGCGTT TERM 1098 1002356 - 1002367 + r 70 -3 -5.03314 | GATAAAACCAGTTTT TTGA CGAT TCAA TTTTTTGGCGCTAGG TERM 1099 1002438 - 1002451 + r 84 -8.1 -4.80178 | opp_overlap 1002438, overlap 1002433 GAAAACATAAAAAAA GGAGC GAGC GCTCC TTTTATTGATTGATA TERM 1100 1002451 - 1002438 - R 100 -8.1 -5.9362 | opp_overlap 1002438 1002433 GAAAACATAAAAAAA GGAGC GAGC GCTCC TTTTATTGATTGATA TERM 1101 1002482 - 1002468 - R 70 -8.6 -3.36878 | opp_overlap 1002457 1002456 TTTATTGATTGATAA CGCTAA GTG TTAGCG ATCGAATCTTAAGTT Shew185_0844 1003322 - 1002477 - | pantoate--beta-alanine ligase TERM 1102 1002688 - 1002704 + g 77 -8.7 -4.17048 | TGCTTAATCCCTGCG GCCATGG CGT CTATGGC TTGTTTTAGCGCAGG TERM 1103 1002713 - 1002728 + g 75 -5.4 -4.83169 | gap 1, overlap 1002713 1002714 CTATGGCTTGTTTTA G-CGCAG GCG CTGCGGC TTTTTCTGCGGCAGT Shew185_0845 1004144 - 1003350 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase Shew185_0846 1004689 - 1004201 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1104 1004648 - 1004592 - G 84 -13.5 -2.69202 | gap 4, opp_overlap 1004594 1004615 1004642, overlap 1004615 GAAACCAGTAGACTA TCGCCTAAGGCT-AATGCGGACAATGCCG TGA CGGCATTGTCCA-ATTGAGCCTT-GG-GA TCTTCAAGATTTGCG TERM 1105 1004594 - 1004648 + g 100 -15.3 -3.0806 | opp_overlap 1004592 1004615, overlap 1004615 1004642 AACCAGTAGACTATC GCCTAAGGCT-AATGCGGACAATGCCG TGA CGGCATTGTCCA-ATTGAGCCTTGGGA TCTTCAAGATTTGCG Shew185_0847 1006230 - 1004689 - | poly(A) polymerase Shew185_0848 1007164 - 1006250 - | glutamate--tRNA ligase TERM 1106 1007317 - 1007296 - R 100 -13.7 -4.55295 | opp_overlap 1007295 1007291, overlap 1007298 GTTGTTAGAAACAAA TAGGCGGGG AAAT CCCCGCCCA GTATGCTTGATTAAC TERM 1107 1007315 - 1007298 - R 100 -14.1 -3.88703 | opp_overlap 1007295 1007291, overlap 1007296 TGTTAGAAACAAATA GGCGGGG AAAT CCCCGCC CAGTATGCTTGATTA Shew185_0849 1007771 - 1007328 - | TraR/DksA family transcriptional regulator Shew185_0850 1008639 - 1007935 - | sugar fermentation stimulation protein Shew185_0851 1008817 - 1010109 + | aminopeptidase B TERM 1108 1010179 - 1010192 + F 100 -9.5 -5.4833 | opp_overlap 1010179 CTGACTGGATTAAAA CCGCC TACG GGCGG TTTTTTATTGGGTGA TERM 1109 1010192 - 1010179 - f 89 -9.5 -4.26903 | opp_overlap 1010179 CTGACTGGATTAAAA CCGCC TACG GGCGG TTTTTTATTGGGTGA Shew185_0852 1010288 - 1010794 + | GCN5-related N-acetyltransferase Shew185_0853 1012276 - 1011389 - | phosphoribulokinase Shew185_0854 1012612 - 1012367 - | hypothetical protein Shew185_0855 1013639 - 1012596 - | alpha/beta hydrolase fold TERM 1110 1013042 - 1013056 + g 74 -2.8 -5.14965 | CTAAGTCGGGATCGT TCAGTT TAT GGCTGA TTTTTTGCTGCAACT TERM 1111 1013528 - 1013515 - G 71 -4.5 -4.51196 | overlap 1013507 TCTAAATCGACAAAA TCGCC ATCG GGCAA CTCTAAGCGCTGCCG TERM 1112 1013746 - 1013695 - H 90 -13.4 -2.52464 | opp_overlap 1013702, overlap 1013702 CGTGTGTTTAATTTA TATCCAAGCGACTTCAAAAT GCTGAAATTCTT ATTTTGAGGTCGCTTGGATA TAAACGCGTGGGCAG Shew185_0856 1013828 - 1014334 + | hypothetical protein Shew185_0857 1014404 - 1015999 + | glucose-methanol-choline oxidoreductase Shew185_0858 1016773 - 1016108 - | anti-ECFsigma factor, ChrR Shew185_0859 1017693 - 1016911 - | short-chain dehydrogenase/reductase SDR TERM 1113 1017612 - 1017629 + g 71 -9.1 -3.55071 | CTGATACGCCTTGTT CGGCCAG TTGT TTGGCCG TTTCGAAACCTATGC Shew185_0860 1017796 - 1018131 + | HxlR family transcriptional regulator TERM 1114 1018168 - 1018184 + F 70 -5.9 -4.38712 | TCAATTTCGATAAGG TAAATCG CAG CGGTTTA TTTTATCGAGATGAA Shew185_0861 1018245 - 1018655 + | glutathione-dependent formaldehyde-activating GFA Shew185_0862 1019201 - 1018740 - | hypothetical protein Shew185_0863 1021169 - 1019256 - | ABC transporter related TERM 1115 1019432 - 1019454 + g 72 -6.2 -4.44284 | overlap 1019408 1019446 1019451 CCAGCAAGTGTTCTA GCTCGGCGAG GCG TTCGCTCAGC TTTTGCTGTTCGGTT TERM 1116 1020839 - 1020855 + g 82 -10.1 -3.83318 | TGCCGTGTAAGAGTG CGATGGC ATT GCCGTCG TTATCTTCTTGGGCC TERM 1117 1021093 - 1021078 - G 71 -8.2 -3.77196 | TTAGCACCGACTAAA CCGACC TTAT GGCCGG GATAAATCGTGAGAG Shew185_0864 1021423 - 1021626 + | hypothetical protein TERM 1118 1021940 - 1021950 + F 70 -5.4 -4.3534 | AACGAACGTACTTTC TGTC TTA GACA TTTTCATCGTTACGC TERM 1119 1022450 - 1022462 + F 71 -4.8 -4.63592 | GGGATGGTTTTTTGC GCCA ATAAC TGGC TTATTTTTATTGGCA TERM 1120 1022642 - 1022653 + F 78 -7.2 -4.46212 | opp_overlap 1022632, overlap 1022632 ATATAGCATCTGTTC GGGC ATAT GCCC TTTTATAGTAAGCAG TERM 1121 1022741 - 1022758 + G 77 -6.9 -4.56597 | CCAGTACCGGCATTG GCTACGC AGCC GCGAAGC TTTTTGCGAGAGAAG Shew185_0865 1022686 - 1023450 + | short chain dehydrogenase TERM 1122 1023950 - 1023977 + G 80 -4.8 -5.03314 | gap 1, opp_overlap 1023949 GATCAGAGAAAATTT GGCATCTA-CGCG ACA CGCTATTGATGCC TTTTTTAGCAGTGAC Shew185_0866 1023462 - 1024304 + | methylated-DNA--protein-cysteine methyltransferase TERM 1123 1024497 - 1024515 + F 79 -10.2 -3.61178 | GGTGATTAGCGAGGC GAGCGCCC GAT GGCCGCTC TTTGGCGTCCATGCC Shew185_0867 1024811 - 1025668 + | pirin domain-containing protein TERM 1124 1025726 - 1025745 + F 100 -12.2 -5.54885 | TAAATCTAAGTCTAA GCCCTGTA TTCC TACAGGGC TTTTTTGTTGCTGTT Shew185_0868 1025997 - 1027373 + | ATP-dependent RNA helicase DbpA TERM 1125 1027429 - 1027452 + F 100 -12.6 -5.49234 | opp_overlap 1027412 1027429 CACTTCACTTTTAAA GGGAATAAAC TCAG GTTTATTCCC TTTTTTGTTGGGTGT TERM 1126 1027452 - 1027429 - f 90 -12.6 -3.57462 | opp_overlap 1027429, overlap 1027412 CACTTCACTTTTAAA GGGAATAAAC TCAG GTTTATTCCC TTTTTTGTTGGGTGT Shew185_0869 1027662 - 1028759 + | hypothetical protein TERM 1127 1028899 - 1028924 + T 100 -15.5 -4.86385 | opp_overlap 1028899 AAAGACAAACAAAAA CGCCCAATTCC ATAC GGAGTTGGGCG TTTCTTTTTAGGGCT TERM 1128 1028924 - 1028899 - T 100 -13.3 -5.48623 | opp_overlap 1028899 AAAGACAAACAAAAA CGCCCAATTCC ATAC GGAGTTGGGCG TTTCTTTTTAGGGCT Shew185_0870 1030559 - 1028982 - | DEAD/DEAH box helicase domain-containing protein Shew185_0871 1031109 - 1032155 + | hypothetical protein TERM 1129 1032235 - 1032207 - T 100 -16.1 -5.06414 | opp_overlap 1032207 TGGCGCTAACAAAAA CAGCGAGATAACC TTA GGTTAGCTCGCTG TTTTTCTATTATATT TERM 1130 1032207 - 1032235 + T 100 -16.1 -5.18995 | opp_overlap 1032207 TGGCGCTAACAAAAA CAGCGAGATAACC TTA GGTTAGCTCGCTG TTTTTCTATTATATT Shew185_0872 1032786 - 1032268 - | hypothetical protein TERM 1131 1033541 - 1033553 + G 75 -5.5 -4.66318 | opp_overlap 1033541 1033542, overlap 1033542 GATACCTCCCACAAA TCAGC CTT GCTGG TTTTATTCCCGTACT Shew185_0873 1033066 - 1035000 + | cysteine/glutathione ABC transporter membrane/ATP-binding component Shew185_0874 1034997 - 1036748 + | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1132 1037176 - 1037164 - g 80 -6.3 -4.74103 | opp_overlap 1037163 CGCCCAAGGCAAAAA GTATG CTG CATAC CTTAGGTTATGAGTG Shew185_0875 1036842 - 1037429 + | putative adenylyl cyclase CyaB TERM 1133 1037710 - 1037722 + T 74 -6.2 -4.46233 | CAAACGATTTAAGCT GCGG TTACC CCGC TTTATTTGCCGTTAA Shew185_0876 1037928 - 1037752 - | DNA binding domain-containing protein Shew185_0877 1038765 - 1038022 - | hypothetical protein TERM 1134 1038817 - 1038802 - H 74 -6.2 -4.35524 | TTGGTAAAGTGAAAA TCAATC GATT GATTGA AGGCTGATTATGAAG TERM 1135 1039015 - 1039034 + H 73 -9.4 -3.1585 | overlap 1039013 GAGCGGGGCGCTTGG GCATTAAG TGTG CTTAATGC TATTGCGTTAAATGG Shew185_0878 1039475 - 1039924 + | hypothetical protein Shew185_0879 1039927 - 1040220 + | hypothetical protein TERM 1136 1040354 - 1040343 - T 73 -5.8 -4.63218 | opp_overlap 1040347 1040351, overlap 1040344 1040345 GGGCGTTGAAGAAAA TCGC GTGA GCGA GGCATGGATGCCTCG TERM 1137 1040347 - 1040374 + T 89 -12 -3.57144 | opp_overlap 1040343 1040345 1040344, overlap 1040351 1040367 GTTGAAGAAAATCGC GTGAGCGAGGCA TGGA TGCCTCGCTAGC TTTCGGGGTACAGGA TERM 1138 1040351 - 1040370 + T 91 -13.6 -2.64803 | opp_overlap 1040343 1040345 1040344, overlap 1040347 1040367 AAGAAAATCGCGTGA GCGAGGCA TGGA TGCCTCGC TAGCTTTCGGGGTAC TERM 1139 1040512 - 1040534 + T 76 -7.6 -4.27062 | AGTCCTCCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTGATTTTGATTAA TERM 1140 1040561 - 1040579 + T 100 -14.6 -3.19371 | opp_overlap 1040561 TTAATGTAATAAAAA GGCCAGAC AGT GTCTGGCC TTAACTTACATAGCT TERM 1141 1040579 - 1040561 - T 100 -14.6 -5.13741 | opp_overlap 1040561 TTAATGTAATAAAAA GGCCAGAC AGT GTCTGGCC TTAACTTACATAGCT Shew185_0880 1043831 - 1040637 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1142 1041292 - 1041341 + g 73 -10 -3.36968 | opp_overlap 1041306 1041309 GCTGAACAGCGTTGA CCTGCGCTAGTGAATGACGATG AAACGA CATCGTTAACCACTTGCTCAGG TTGTGAGGTTGAGTC TERM 1143 1044317 - 1044296 - R 100 -13.1 -5.28176 | opp_overlap 1044296 TTGATTGACAAAAAA GCCAGTGTT TGAA AACACTGGC TTTTGGAAGGTAAAT TERM 1144 1044296 - 1044317 + r 100 -13.1 -4.09864 | opp_overlap 1044296 TTGATTGACAAAAAA GCCAGTGTT TGAA AACACTGGC TTTTGGAAGGTAAAT Shew185_0881 1044903 - 1044355 - | SH3 type 3 domain-containing protein TERM 1145 1044993 - 1045019 + r 71 -9.4 -2.85699 | opp_overlap 1044995, overlap 1044992 TGAGGCCTGTAATGC AAGAGGGAAGTC ATA GACTTCCCTCAA CTTTACTGCATCCAT TERM 1146 1045017 - 1044995 - R 100 -16.4 -3.17194 | opp_overlap 1044993 1044992 AGGCCTGTAATGCAA GAGGGAAGTC ATA GACTTCCCTC AACTTTACTGCATCC Shew185_0882 1046420 - 1045131 - | phosphate transporter Shew185_0883 1047126 - 1046446 - | hypothetical protein TERM 1147 1046913 - 1046903 - G 71 -4.6 -4.55697 | ACTGGCATAAACAAA CCGC TTG GCAG AGTAAGGCGAATTTC TERM 1148 1047193 - 1047166 - H 87 -8.4 -4.63527 | opp_overlap 1047165 CCATTATTGGAAAAA GCGGGCGCAT GTTAACCT ATGCGTCCGC GTATTGAAACTGTGT TERM 1149 1048263 - 1048243 - g 78 -6.1 -4.66163 | overlap 1048245 ATGTCGATTGAAAAA CAGCTCGAT TTT ATCGAGCAA GCACAGACGCTAACC TERM 1150 1048261 - 1048245 - g 85 -10.9 -3.94812 | overlap 1048243 GTCGATTGAAAAACA GCTCGAT TTT ATCGAGC AAGCACAGACGCTAA TERM 1151 1048333 - 1048315 - g 71 -7.4 -4.11216 | overlap 1048299 GGCTTATTCGCAAAA CTTGGCCA ACA TGCCCAAG TTAAAGCGCGGCTCA Shew185_0884 1047328 - 1048854 + | adenylate cyclase TERM 1152 1048967 - 1048931 - T 100 -12.6 -4.65895 | gap 2, opp_overlap 1048937, overlap 1048933 1048937 CTCGGCACTGAAAAA GACTAAGGGCTCAATCCA CAT TGGATTGAGCCCTT--TC TTTTGCAGATTGTTA TERM 1153 1048967 - 1048933 - T 100 -14.4 -3.94812 | opp_overlap 1048937, overlap 1048931 1048937 CGGCACTGAAAAAGA CTAAGGGCTCAATCCA CAT TGGATTGAGCCCTTTC TTTTGCAGATTGTTA TERM 1154 1048937 - 1048963 + T 100 -19.6 -4.66535 | opp_overlap 1048931 1048933 1048937 ACTGAAAAAGACTAA GGGCTCAATCCA CAT TGGATTGAGCCC TTTCTTTTGCAGATT TERM 1155 1048963 - 1048937 - T 100 -19.6 -3.61527 | opp_overlap 1048937, overlap 1048931 1048933 ACTGAAAAAGACTAA GGGCTCAATCCA CAT TGGATTGAGCCC TTTCTTTTGCAGATT Shew185_0885 1049824 - 1049000 - | Ion transport 2 domain-containing protein TERM 1156 1049964 - 1049931 - R 83 -11.7 -3.14564 | opp_overlap 1049926, overlap 1049934 CTATTTGTCGATTAA TCACGCCAGCCATTT ACAT AAAGGGCTGGCGCGT GAAGTGATTGCGGCG TERM 1157 1049961 - 1049934 - R 93 -14.2 -2.77899 | opp_overlap 1049926, overlap 1049931 TTTGTCGATTAATCA CGCCAGCCATTT ACAT AAAGGGCTGGCG CGTGAAGTGATTGCG Shew185_0886 1050309 - 1049980 - | hypothetical protein TERM 1158 1050370 - 1050402 + r 85 -7.2 -4.8384 | gap 1, opp_overlap 1050380, overlap 1050374 1050380 AGATTGTATTGGGAT TATCGATAAAGTGCG AGCA CGCACTTTATCT-TA TTTTTGGGTTATTTC TERM 1159 1050374 - 1050399 + r 100 -14.9 -4.48792 | opp_overlap 1050380, overlap 1050370 1050380 TGTATTGGGATTATC GATAAAGTGCG AGCA CGCACTTTATC TTATTTTTGGGTTAT TERM 1160 1050393 - 1050380 - R 73 -8.1 -3.93695 | opp_overlap 1050380 1050374 1050370 GGGATTATCGATAAA GTGCG AGCA CGCAC TTTATCTTATTTTTG TERM 1161 1050380 - 1050393 + r 82 -8.1 -4.48869 | opp_overlap 1050380, overlap 1050374 1050370 GGGATTATCGATAAA GTGCG AGCA CGCAC TTTATCTTATTTTTG Shew185_0887 1051064 - 1050411 - | hypothetical protein TERM 1162 1050553 - 1050584 + g 80 -7.2 -4.57073 | gap 1, overlap 1050561 TAGTACTCGAAGGGC TCACC-CGTGGCGCC ATT GGCGTCTTGTGGTGG TTTTTGACCGCGGTA TERM 1163 1050561 - 1050575 + g 71 -9.2 -3.53718 | overlap 1050553 GAAGGGCTCACCCGT GGCGCC ATT GGCGTC TTGTGGTGGTTTTTG TERM 1164 1051210 - 1051168 - R 100 -6.4 -5.99154 | gap 1, opp_overlap 1051168 GATGAAACAAAAAAA TGCCGAG-GTCAGTAGG GGGTGATGAT CCCACTGAGACTCGGCA TTCGGTCAATCATTG Shew185_0888 1051916 - 1051227 - | phage shock protein A, PspA TERM 1165 1051314 - 1051329 + g 75 -7.6 -4.26903 | GGCTAGCTTAGATTG CAGTGA CTTG TCACTG TTTTCATCGGCTAAG TERM 1166 1051573 - 1051594 + g 71 -6.5 -4.24342 | AAACGTGCAGCATGG GCGCTAAAG TTAT CGTTGGCGC TTTGTTGCTCAGACA Shew185_0889 1052341 - 1051928 - | hypothetical protein TERM 1167 1052444 - 1052428 - R 79 -5.1 -5.15634 | opp_overlap 1052431, overlap 1052431 CATCCTATTAAAAAA GATTCAG TCC CTGATTC TCGGACCAATCTTGC Shew185_0890 1054144 - 1052420 - | spermidine synthase TERM 1168 1052487 - 1052500 + g 87 -6.7 -5.07652 | opp_overlap 1052487 TACAGCTGCAACGAA CCCAA TTCA TTGGG TTTTATTTTGGCGGC TERM 1169 1054122 - 1054095 - G 100 -15.6 -3.34522 | opp_overlap 1054095, overlap 1054083 ACATCGTCGAACCAA CCTAGGCGGCTA GGTT TAGCCGCCGAGG GGGTTAAGCTGGTTT Shew185_0891 1055048 - 1054149 - | hypothetical protein Shew185_0892 1056036 - 1055062 - | hypothetical protein TERM 1170 1056107 - 1056119 + H 72 -9.1 -3.42574 | opp_overlap 1056105 TGCTTGCCCAATATG CCTGC TGC GCAGG TTATAGTACCCTTAA Shew185_0893 1056275 - 1059130 + | (glutamate--ammonia-ligase) adenylyltransferase Shew185_0894 1059248 - 1060219 + | diguanylate cyclase TERM 1171 1060264 - 1060304 + T 100 -13.6 -5.06414 | gap 1, opp_overlap 1060267 1060269 1060275, overlap 1060269 TCATGTGTGCTTAAG CAAGATGAAAAGGGAGACA ATAA TGTCTCCCTTTTCAT-TGG TTTTTATTCGGCGAA TERM 1172 1060302 - 1060267 - T 100 -16.4 -3.33696 | opp_overlap 1060264 1060269, overlap 1060269 1060275 TGTGTGCTTAAGCAA GATGAAAAGGGAGACA ATAA TGTCTCCCTTTTCATT GGTTTTTATTCGGCG TERM 1173 1060300 - 1060269 - T 100 -19 -3.23853 | opp_overlap 1060264 1060269, overlap 1060267 1060275 TGTGCTTAAGCAAGA TGAAAAGGGAGACA ATAA TGTCTCCCTTTTCA TTGGTTTTTATTCGG TERM 1174 1060269 - 1060300 + T 100 -19 -3.9407 | opp_overlap 1060269 1060267 1060275, overlap 1060264 TGTGCTTAAGCAAGA TGAAAAGGGAGACA ATAA TGTCTCCCTTTTCA TTGGTTTTTATTCGG TERM 1175 1060294 - 1060275 - T 95 -12.2 -4.46404 | opp_overlap 1060269 1060264, overlap 1060269 1060267 TAAGCAAGATGAAAA GGGAGACA ATAA TGTCTCCC TTTTCATTGGTTTTT Shew185_0895 1061298 - 1060339 - | hypothetical protein TERM 1176 1060937 - 1060959 + g 71 -4.8 -4.58395 | AGATACAGGGTGGTT TCTGGCCTTA AGA TCAGCCCAGA TTTTTCCACCATAGC TERM 1177 1062244 - 1062229 - g 77 -6.8 -4.58283 | GAAGGGCGCGAAAAA CCGGCA ATTT TGCCAG TGATGGGTTTTCCGC Shew185_0896 1061437 - 1062435 + | LysR family transcriptional regulator Shew185_0897 1064243 - 1062618 - | methyl-accepting chemotaxis sensory transducer Shew185_0898 1066181 - 1064928 - | AFG1 family ATPase TERM 1178 1066882 - 1066859 - g 83 -9.6 -4.16943 | gap 1 CCTGACATGCTAAAA GCGATCGAGCC AGC GGCTCAA-CGC TCGGATGCGCACCTA Shew185_0899 1066496 - 1067308 + | hypothetical protein TERM 1179 1067897 - 1067873 - f 70 -8.5 -3.4247 | overlap 1067875 ACAATTCTAATAACA CAGGCATTCCC ACT GGGAATGGCAG ACTGCAATACAGGAG TERM 1180 1067895 - 1067875 - f 75 -9.7 -3.2756 | overlap 1067873 AATTCTAATAACACA GGCATTCCC ACT GGGAATGGC AGACTGCAATACAGG TERM 1181 1067940 - 1067959 + G 83 -9.2 -4.42667 | AGATTGACCTTACTT GCCGCGGC AACC GCTGTGGC TTTTACTGGTTTTGC Shew185_0900 1067919 - 1069214 + | phosphate-selective porin O and P Shew185_0901 1069227 - 1070180 + | hypothetical protein Shew185_0902 1070191 - 1070658 + | putative tricarboxylic transport membrane protein TERM 1182 1071438 - 1071448 + G 79 -3.2 -5.27477 | GTGATTGGTCGCTCG TCGA TTT TCGG TTTTTTGATTGGGGT Shew185_0903 1070661 - 1072181 + | hypothetical protein Shew185_0904 1072197 - 1073810 + | signal transduction histidine kinase regulating citrate/malate metabolism Shew185_0905 1073911 - 1074591 + | response regulator receiver TERM 1183 1074643 - 1074674 + T 91 -13.2 -3.13475 | gap 1, overlap 1074631 TTAGTCCACCTTGAC CCTTTCAAGCTGCCA CTC TGGCAGCTT-AGAGG TTAAGTCTGGGATTA Shew185_0906 1076286 - 1074628 - | peptidase M16 domain-containing protein TERM 1184 1074890 - 1074902 + g 71 -6.3 -4.21275 | CTGAGTAAATCCTCA CCTAT CAA ATAGG TTTTAAGTGCATTGA Shew185_0907 1077701 - 1076283 - | peptidase M16 domain-containing protein TERM 1185 1078153 - 1078178 + G 73 -2.5 -5.08824 | gap 1, opp_overlap 1078154, overlap 1078153 1078156 TTTCATGGCGAAGAA T-CTGCAGGCCC TTG GGGTTTGCTGCA TTTTTTGAGTGAAGC Shew185_0908 1077919 - 1078746 + | hypothetical protein TERM 1186 1078795 - 1078813 + T 100 -13.2 -5.48825 | opp_overlap 1078795 TCAATGACAAAAAAA TACCCGCT GAT AGCGGGTA TTTTTTTAGCTGATA TERM 1187 1078813 - 1078795 - T 100 -13.2 -5.71983 | opp_overlap 1078795 TCAATGACAAAAAAA TACCCGCT GAT AGCGGGTA TTTTTTTAGCTGATA Shew185_0909 1079755 - 1078841 - | ErfK/YbiS/YcfS/YnhG family protein TERM 1188 1079800 - 1079788 - H 87 -4.8 -5.4505 | CCTGTTAATAAAAAA GCGT GTTTA ACGC AGCTTTCTCTCTTAA TERM 1189 1082193 - 1082179 - g 71 -4.2 -4.77173 | opp_overlap 1082179 GCGCCAGAAAATAAA GAAGTG CAA CGCTTC TTCGGTGATTTCTTT Shew185_0910 1080706 - 1082436 + | potassium/proton antiporter TERM 1190 1082542 - 1082573 + T 75 -10.3 -3.02511 | opp_overlap 1082548, overlap 1082548 ATCGAAAGTCGCCAT AAAAAATGCCAGC TTATTT GCTGGCATTTTTG TATTCAAAAACTGAA TERM 1191 1082567 - 1082548 - T 93 -9.3 -5.24531 | opp_overlap 1082542 1082548 AGTCGCCATAAAAAA TGCCAGC TTATTT GCTGGCA TTTTTGTATTCAAAA TERM 1192 1082548 - 1082567 + T 90 -9.3 -5.0916 | opp_overlap 1082548, overlap 1082542 AGTCGCCATAAAAAA TGCCAGC TTATTT GCTGGCA TTTTTGTATTCAAAA Shew185_0911 1083519 - 1082593 - | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase TERM 1193 1083199 - 1083210 + g 78 -5.8 -4.72272 | GCCTGTGATGCTCAT GTGC TGCT GCAC TTTTTCATCGGACCA Shew185_0912 1083623 - 1085053 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 1194 1085144 - 1085170 + G 72 -10.3 -3.02144 | gap 1 TACCAGAGCTTGGCA CTTGCTT-GGCA TTAT TGCCTAAGCAAG TGTTGGCGCAGCTGC TERM 1195 1085411 - 1085397 - g 73 -10 -3.31144 | CGGTCATTTGGAGAA CCTTGC CCT GCAAGG CACAGTGTTACCGAT Shew185_0913 1085050 - 1085877 + | hypothetical protein TERM 1196 1086213 - 1086235 + G 85 -10.6 -4.17556 | opp_overlap 1086219 ATTTTCTCGTTCGTT TAGATAGCCG TAT CGGCAATCTA TTTGTTGCGGCTCTG Shew185_0914 1086029 - 1086508 + | TetR family transcriptional regulator TERM 1197 1086558 - 1086525 - f 100 -14.1 -3.41134 | opp_overlap 1086534, overlap 1086533 1086534 AGACTGACCAATTAA TATAAAAATGGAGCC TTAT GGCTCCTTTTTTATA GGTAAAAATCGTGAT TERM 1198 1086550 - 1086533 - f 85 -6.9 -5.1485 | opp_overlap 1086534, overlap 1086525 1086534 CAATTAATATAAAAA TGGAGCC TTAT GGCTCCT TTTTTATAGGTAAAA TERM 1199 1086534 - 1086549 + F 100 -10.4 -5.28176 | opp_overlap 1086533 1086525 1086534 AATTAATATAAAAAT GGAGCC TTAT GGCTCC TTTTTTATAGGTAAA TERM 1200 1086549 - 1086534 - f 80 -10.4 -3.67283 | opp_overlap 1086534, overlap 1086533 1086525 AATTAATATAAAAAT GGAGCC TTAT GGCTCC TTTTTTATAGGTAAA TERM 1201 1087054 - 1087065 + G 76 -2.2 -5.28942 | GAGCCACATCTTGTC CGAT ATTC GTCG TTTTTATTTAGAGTC Shew185_0915 1086665 - 1087249 + | hypothetical protein TERM 1202 1087277 - 1087303 + T 84 -10.2 -3.81428 | opp_overlap 1087277, overlap 1087269 TAGCTCCTCCCTAAA CATCAGGGGTCA TTC TTATCCCTGATG TTTGAATTCATTGAT Shew185_0916 1087827 - 1087447 - | hypothetical protein TERM 1203 1087960 - 1087988 + r 100 -16.9 -2.71483 | opp_overlap 1087960 1087966, overlap 1087966 TAAAAAAATGTGAAA TGAAAAGGGAGCC AGC GGCTCCCTTTTTA TCATTGAAACAGTGT TERM 1204 1087988 - 1087960 - R 100 -14.7 -3.8615 | opp_overlap 1087960 1087966, overlap 1087966 TAAAAAAATGTGAAA TGAAAAGGGAGCC AGC GGCTCCCTTTTTA TCATTGAAACAGTGT TERM 1205 1087966 - 1087982 + r 100 -13.7 -4.98255 | opp_overlap 1087960 1087966, overlap 1087960 AATGTGAAATGAAAA GGGAGCC AGC GGCTCCC TTTTTATCATTGAAA TERM 1206 1087982 - 1087966 - R 100 -13.7 -4.564 | opp_overlap 1087966 1087960, overlap 1087960 AATGTGAAATGAAAA GGGAGCC AGC GGCTCCC TTTTTATCATTGAAA Shew185_0917 1089531 - 1088047 - | pyridine nucleotide transhydrogenase Shew185_0918 1091069 - 1089543 - | NAD(P) transhydrogenase subunit alpha TERM 1207 1091805 - 1091761 - g 77 -10.1 -3.55563 | AGGTTATGCGGTAAA TCTGGCTTCAATGGGCGAATA CAA TGTTCGCCAACTGAAACAAGA AACTGTGCTCTTGCT TERM 1208 1093105 - 1093091 - g 73 -7.8 -4.00756 | overlap 1093095 CACCGTATTAAAGAA CAAGGC CAA GCCCTG TGGCAATGGTTGCAA Shew185_0919 1091489 - 1093288 + | sulfite reductase (NADPH) flavoprotein, alpha chain TERM 1209 1093356 - 1093333 - f 71 -9.6 -2.88032 | overlap 1093332 TAAGAATAGCCAAAG CTGCACACGT GATG ACTTGTGCAG TCAGCGAACCGAATT TERM 1210 1094389 - 1094403 + G 73 -10 -3.36878 | TGATGTAGTGATTGG CGATCG CGG CGATCG TTATGGCTGGGTCGA Shew185_0920 1093388 - 1095085 + | sulfite reductase subunit beta Shew185_0921 1095078 - 1095860 + | phosphoadenosine phosphosulfate reductase TERM 1211 1095908 - 1095887 - f 77 -8.7 -3.89412 | opp_overlap 1095887 ATTTAAAGTATTAAA CGCCTCAAT TGCC ATTGGGGCG TTTTTTATCTCGGTA TERM 1212 1095887 - 1095908 + F 100 -10.9 -5.38047 | opp_overlap 1095887 ATTTAAAGTATTAAA CGCCTCAAT TGCC ATTGGGGCG TTTTTTATCTCGGTA TERM 1213 1096158 - 1096172 + F 79 -8.6 -4.11484 | opp_overlap 1096157 1096160 TTTTACTGTGAAATT GACATG ATT CATGTC TTTTCCGAGGTTAAG Shew185_0922 1096617 - 1097402 + | monofunctional biosynthetic peptidoglycan transglycosylase Shew185_0923 1097495 - 1098211 + | prolyl 4-hydroxylase alpha subunit TERM 1214 1099411 - 1099399 - g 74 -2.6 -5.01422 | TGACAGAAAAAGAAA GCCA TATGG CGGC CTCATTTGTGGTTGA TERM 1215 1099658 - 1099642 - g 73 -10.1 -3.10522 | opp_overlap 1099641 1099649, overlap 1099638 AGTTGAGCCAACAGA GCCCAGC TAT GCTAGGC ATGTTCACTGGTATG Shew185_0924 1098477 - 1100213 + | hypothetical protein TERM 1216 1100291 - 1100269 - T 89 -12 -3.58305 | opp_overlap 1100270, overlap 1100270 1100272 AATCAATGTTTGAAA TGAGCCAGCA GAT TGCTGGCTCT TTTTTTAGCTTTAAT TERM 1217 1100270 - 1100290 + T 100 -15.5 -5.58209 | opp_overlap 1100269 1100270 1100272 ATCAATGTTTGAAAT GAGCCAGCA GAT TGCTGGCTC TTTTTTTAGCTTTAA TERM 1218 1100290 - 1100270 - T 95 -15.5 -2.74501 | opp_overlap 1100270, overlap 1100269 1100272 ATCAATGTTTGAAAT GAGCCAGCA GAT TGCTGGCTC TTTTTTTAGCTTTAA TERM 1219 1100288 - 1100272 - T 83 -12.3 -2.9162 | opp_overlap 1100270, overlap 1100270 1100269 CAATGTTTGAAATGA GCCAGCA GAT TGCTGGC TCTTTTTTTAGCTTT Shew185_0925 1101864 - 1100302 - | hypothetical protein TERM 1220 1101814 - 1101793 - G 100 -14.5 -5.21709 | TGGCACAGCAAAAAA CGCGAGCTT AAGT AAGCTCGCG AAAATAATGACACTG TERM 1221 1101984 - 1101969 - R 71 -7.6 -3.91897 | CCGCTGAGCCATAAA CTCAGA TCCA TCTGAG CAATTTAGCAGCAGG Shew185_0926 1102942 - 1102058 - | phospholipase A(1) TERM 1222 1102835 - 1102824 - G 75 -5.8 -4.5442 | GGTGTAATTACAAAA GGCA GTTC TGCC GTGGCAAGTTCATCT Shew185_0927 1103388 - 1104233 + | uroporphyrin-III C-methyltransferase Shew185_0928 1104335 - 1105243 + | sulfate adenylyltransferase subunit 2 Shew185_0929 1105327 - 1106769 + | sulfate adenylyltransferase subunit 1 TERM 1223 1106841 - 1106856 + G 77 -2.6 -5.34381 | gap 1 AATTAGCGGCCGTAT CAAT-CC TGC GGTATTG TTTTTATTTGCATTT TERM 1224 1107041 - 1107013 - g 78 -11.9 -3.07994 | GGTAAGTTGAGTCAA GTCATAGGCAA TAGTTCT TTGCCTATGAC AATGGCAAAGCTTGG Shew185_0930 1106773 - 1108497 + | TrkA domain-containing protein Shew185_0931 1108562 - 1109179 + | adenylyl-sulfate kinase TERM 1225 1109243 - 1109271 + T 100 -14.7 -4.08216 | opp_overlap 1109248, overlap 1109248 GATTGAATGGTCATA AAAAACAGGAGCC TTG GGCTCCTGTTTTG TTTTGGACGCAATGC TERM 1226 1109248 - 1109266 + T 100 -14.6 -5.07652 | opp_overlap 1109248, overlap 1109243 AATGGTCATAAAAAA CAGGAGCC TTG GGCTCCTG TTTTGTTTTGGACGC TERM 1227 1109266 - 1109248 - T 100 -14.6 -5.25803 | opp_overlap 1109243 1109248 AATGGTCATAAAAAA CAGGAGCC TTG GGCTCCTG TTTTGTTTTGGACGC Shew185_0932 1111345 - 1109447 - | integral membrane sensor signal transduction histidine kinase Shew185_0933 1113576 - 1111342 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase Shew185_0934 1114600 - 1113719 - | hypothetical protein TERM 1228 1114786 - 1114799 + r 78 -3.8 -5.32944 | overlap 1114774 TATTCGATCGCTTTA GCGA TGGATT TCGC TTTTTTGCTTGTCCA Shew185_0935 1115978 - 1114770 - | major facilitator transporter TERM 1229 1115453 - 1115434 - G 78 -10.8 -3.37245 | TTAGGGTAATACCAA GTCATGGT CAGC ACCATGAC CAGACCTAACGCACC TERM 1230 1115803 - 1115789 - G 74 -2.8 -5.09245 | GTAAAAGCACAAAAA TGGC GGTAAAA GCCA AAAACCCCGGGATCT Shew185_0936 1116245 - 1117651 + | hypothetical protein Shew185_0937 1117693 - 1118853 + | putative lipoprotein TERM 1231 1118942 - 1118986 + F 72 -3.6 -5.05113 | gap 1, opp_overlap 1118953, overlap 1118950 CCGTTTGGTGAGTTA TGTCTTAAGCAGCAAGGATGC AATT GCATAGTTGCTGCTTT-GTCA TTTTATTTGTGTGAG TERM 1232 1118950 - 1118979 + F 85 -9.3 -4.27846 | opp_overlap 1118953, overlap 1118942 TGAGTTATGTCTTAA GCAGCAAGGATGC AATT GCATAGTTGCTGC TTTGTCATTTTATTT Shew185_0938 1119009 - 1120634 + | hypothetical protein TERM 1233 1120642 - 1120666 + F 75 -7.9 -3.97308 | CTTTGTAAAGCGTGA CAGGATGATTT GTC GATTCATCCTG TTTACTGTATTTCAG TERM 1234 1120686 - 1120705 + F 100 -12.2 -5.63504 | CTGTATTTCAGTATG GGCAAACC TCAG GGTTTGCC TTTTTTTGTGAGCTT Shew185_0939 1120851 - 1121372 + | protoporphyrinogen oxidase Shew185_0940 1121509 - 1122036 + | hypothetical protein TERM 1235 1122118 - 1122097 - T 95 -11.6 -5.10208 | opp_overlap 1122097 GAATGCGAATAAAAA TGGCCTCC TAATTT GGAGGCCA TTTTTTATGCTAGCG TERM 1236 1122097 - 1122118 + T 100 -11.6 -5.31275 | opp_overlap 1122097 GAATGCGAATAAAAA TGGCCTCC TAATTT GGAGGCCA TTTTTTATGCTAGCG Shew185_0941 1122917 - 1122162 - | DSBA oxidoreductase TERM 1237 1122786 - 1122774 - G 73 -4.9 -4.66318 | ATTATGGCAATAAAA TGAAT AGA ATTCA GTGAGTTTAGGTTCG Shew185_0942 1123904 - 1123260 - | heat shock protein DnaJ domain-containing protein TERM 1238 1123359 - 1123393 + g 100 -16.4 -2.89267 | opp_overlap 1123358, overlap 1123346 1123379 1123389 CTTGAGCGCTAAACG GCGCCATTGCTTGCGG ATA TCGCGGGCGGTGGCGC TCTCGTCTAATTCGA TERM 1239 1124190 - 1124226 + r 74 -6.2 -4.4846 | opp_overlap 1124190 1124192, overlap 1124192 TAGGGTGCAAAAAAT TATGCCCTTG-TTTATAT CAC AT-TAAATCAAGGGCATG TTTATTATTCACTTA Shew185_0943 1124904 - 1124251 - | dihydropteridine reductase Shew185_0944 1125033 - 1125572 + | GCN5-related N-acetyltransferase TERM 1240 1126179 - 1126190 + F 74 -4.4 -4.87665 | TACACCAATTTTTAA TGAG TTAG CTCA TTTTTATGCCTCAGC Shew185_0946 1126300 - 1127472 + | hypothetical protein Shew185_0947 1128608 - 1127700 - | transporter DMT superfamily protein TERM 1241 1128557 - 1128542 - G 75 -5.4 -4.76892 | gap 1, opp_overlap 1128544, overlap 1128544 ACATCAACGCAAAAA GT-GCCG ATG CGGCTAC ATTCAGACTTACGCC TERM 1242 1128981 - 1128967 - g 77 -2.8 -5.26875 | TCGGCAATTAAAAAA GGAC TTTTCTG GTCC AGAAGTTCAGCAATG Shew185_0948 1128710 - 1129162 + | AsnC family transcriptional regulator Shew185_0949 1130589 - 1129864 - | ABC transporter related Shew185_0950 1131262 - 1130582 - | polar amino acid ABC transporter, inner membrane subunit TERM 1243 1131175 - 1131159 - G 75 -8 -4.17958 | opp_overlap 1131159 AACATGGCGAAGAAA GTGACG ATTAA CGTCAC TTTCAAACCATTTAA Shew185_0951 1132004 - 1131270 - | extracellular solute-binding protein Shew185_0952 1132375 - 1133256 + | hypothetical protein Shew185_0953 1134154 - 1133264 - | LysR family transcriptional regulator TERM 1244 1133852 - 1133836 - G 85 -7.9 -4.74801 | overlap 1133837 TAATGGGAGCAAAAA TCTCGGC GCT GCCGAGC GGCGCTAATCCCAGA TERM 1245 1133851 - 1133837 - G 82 -11.4 -3.44158 | overlap 1133836 AATGGGAGCAAAAAT CTCGGC GCT GCCGAG CGGCGCTAATCCCAG Shew185_0954 1134277 - 1134711 + | LrgA family protein Shew185_0955 1134714 - 1135433 + | LrgB family protein TERM 1246 1135505 - 1135534 + F 100 -5.8 -5.98781 | gap 1 CAAATTTGCCTCTTC GGGCGC-TAAC ACCTTCTCA GTTATGCGCCC TTTTTTTTGCTTGTG Shew185_0956 1135612 - 1136103 + | GCN5-related N-acetyltransferase TERM 1247 1136514 - 1136524 + G 73 -3.2 -4.97957 | ATGAAGATCCGTTTT CTGC TCA GTAG TTTTATTCTTGTATG Shew185_0957 1136499 - 1137464 + | D-alanyl-D-alanine endopeptidase TERM 1248 1137530 - 1137566 + F 100 -15.3 -4.79223 | opp_overlap 1137531, overlap 1137531 ATAAAGACTAAAAAA ACCAAAGGCCAGATG AGCAATC CATCTGGCCTTTGGC TTTTTAATACTGTAA TERM 1249 1137531 - 1137565 + F 100 -18.8 -3.46811 | opp_overlap 1137531, overlap 1137530 TAAAGACTAAAAAAA CCAAAGGCCAGATG AGCAATC CATCTGGCCTTTGG CTTTTTAATACTGTA TERM 1250 1137565 - 1137531 - f 100 -19.5 -5.66989 | opp_overlap 1137531 1137530 TAAAGACTAAAAAAA CCAAAGGCCAGATGA GCAAT CCATCTGGCCTTTGG CTTTTTAATACTGTA TERM 1251 1138922 - 1138946 + G 79 -11.5 -3.214 | overlap 1138920 GTATTTGATCACTGG GGTATTGGCGA GTA TCGCCAGTATC TGTTGGTATGATGCC Shew185_0958 1137657 - 1139300 + | rhomboid family protein TERM 1252 1139317 - 1139280 - T 85 -7 -5.09225 | gap 1, opp_overlap 1139285, overlap 1139285 AGCCCAGCTAAAAAA CGTAAGCCGAGACGCAA ATAAG TCGCG-CTCGGCTTTGG ATTTAAGAAGATTTA TERM 1253 1139312 - 1139285 - T 77 -9.9 -3.52779 | gap 1, opp_overlap 1139285, overlap 1139280 AGCTAAAAAACGTAA GCCGAGACGCAA ATAAG TCGCG-CTCGGC TTTGGATTTAAGAAG TERM 1254 1139285 - 1139312 + T 73 -7.7 -3.84451 | gap 1, opp_overlap 1139285 1139280 AGCTAAAAAACGTAA GCCGAGACGCAA ATAAG TCGCG-CTCGGC TTTGGATTTAAGAAG Shew185_0959 1140415 - 1139330 - | sodium/calcium exchanger membrane region TERM 1255 1140051 - 1140031 - G 73 -3.3 -5.00138 | gap 1 CATCTAAATTAAAAA GCTGG-GT GTGGTA ACGCCAGC CGCCAAGTAATAAGG TERM 1256 1140299 - 1140286 - G 73 -9.5 -3.41878 | TGGCCCAAGTGACAA CGCCC AATA GGGCG AGTGATACGGGAATA Shew185_0960 1142880 - 1140568 - | MORN repeat-containing protein Shew185_0961 1144737 - 1143007 - | MORN repeat-containing protein Shew185_0962 1147047 - 1144750 - | hypothetical protein TERM 1257 1147286 - 1147312 + r 77 -9.5 -3.60627 | opp_overlap 1147286 GGAAATAAAACAAAA CCCAAACCAAG GCGTG CTTGATTTGGG TTTACGCTGGGATCA TERM 1258 1147312 - 1147286 - R 100 -11.7 -5.34857 | opp_overlap 1147286 GGAAATAAAACAAAA CCCAAACCAAG GCGTG CTTGATTTGGG TTTACGCTGGGATCA TERM 1259 1147318 - 1147329 + r 85 -5.8 -5.20783 | TTGATTTGGGTTTAC GCTG GGAT CAGC TTTTTCTATTTCGAT Shew185_0963 1148606 - 1147398 - | Na+ dependent nucleoside transporter Shew185_0964 1149879 - 1148932 - | LysR family transcriptional regulator TERM 1260 1150828 - 1150798 - g 100 -16.2 -3.20723 | TCCTGATGAACTCAA TGCTGGCGTACCTT TCT ATGGCACGCCAGCA GCTGCAGAGCTGCGT Shew185_0965 1150100 - 1151080 + | dienelactone hydrolase TERM 1261 1151152 - 1151179 + T 85 -12.8 -3.12327 | opp_overlap 1151157, overlap 1151157 GCTATATCATTCAAG CAAAAGCCGACG CTAG CGTCGGCTTTTA TCTTCAATCTCCCAC TERM 1262 1151157 - 1151174 + T 100 -12.7 -4.69326 | opp_overlap 1151157, overlap 1151152 ATCATTCAAGCAAAA GCCGACG CTAG CGTCGGC TTTTATCTTCAATCT TERM 1263 1151174 - 1151157 - T 100 -12.7 -4.43879 | opp_overlap 1151157 1151152 ATCATTCAAGCAAAA GCCGACG CTAG CGTCGGC TTTTATCTTCAATCT Shew185_0966 1152566 - 1151274 - | gluconate 2-dehydrogenase acceptor subunit Shew185_0967 1153099 - 1152566 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Shew185_0968 1155993 - 1153096 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 1264 1154383 - 1154395 + g 75 -3.3 -5.06414 | CATCCCCGGATGTTT GGCCT CAT AGTCC TTTTTATTCACCGCA TERM 1265 1154432 - 1154450 + g 79 -11 -3.57144 | TGCCACACGGGATCT TGCTCGGC CAT GTCGAGCA TTTCGCGGTAACGCA TERM 1266 1155343 - 1155322 - G 78 -5.9 -4.66609 | gap 1 TACGCTAGGGAAAAA TAGCCCA-TC GTG GAGCGGGCTA TATAAATCTTCCCTT TERM 1267 1156603 - 1156613 + H 70 -3.2 -4.89838 | overlap 1156597 AGTCACTTGCATCAG GACG ATG TGTC TTTTCTCTTTCTTAG Shew185_0969 1157092 - 1157511 + | hypothetical protein Shew185_0970 1157596 - 1158729 + | hypothetical protein Shew185_0971 1158731 - 1159246 + | hypothetical protein TERM 1268 1159743 - 1159765 + T 73 -7 -4.29472 | TCCCCTTCTTGCCCT GGTGTGGAAT GGA ATTCCACGAC TTTGATTTTGATTTA TERM 1269 1159800 - 1159786 - T 86 -7.2 -5.08824 | TTTTGATTTAAAAAA TCAAAC GAA GTTTGA ATCAGCTTCTAAAAC TERM 1270 1159912 - 1159937 + T 77 -4.8 -4.83615 | opp_overlap 1159914, overlap 1159914 GATAATCTGTTCAAC CACGTTTATG TAACAC CATAAACGTA TTTTTATAGGGCATA TERM 1271 1159914 - 1159935 + T 73 -7.4 -4.03995 | opp_overlap 1159914, overlap 1159912 TAATCTGTTCAACCA CGTTTATG TAACAC CATAAACG TATTTTTATAGGGCA Shew185_0972 1161287 - 1159965 - | methyl-accepting chemotaxis sensory transducer TERM 1272 1162406 - 1162436 + r 70 -5.5 -4.39571 | gap 2, overlap 1162408 AGCAGTCCTCCTTGG TCG-GGT-GTGGGGT GAA GCCCCACGACCTTGA TTTTAACTTTCTAAA TERM 1273 1162408 - 1162432 + r 79 -9.9 -3.73399 | overlap 1162406 CAGTCCTCCTTGGTC GGGTGTGGGGT GAA GCCCCACGACC TTGATTTTAACTTTC TERM 1274 1162483 - 1162460 - R 100 -11 -5.37593 | opp_overlap 1162459 1162463, overlap 1162463 TTCTAAAGTAAAAAA TTAGGGGCGA CAAC TCGCCCCTTA ACTTTGCCCATTTAT TERM 1275 1162463 - 1162480 + r 87 -12.7 -3.28269 | opp_overlap 1162460 1162463, overlap 1162459 TAAAGTAAAAAATTA GGGGCGA CAAC TCGCCCC TTAACTTTGCCCATT TERM 1276 1162480 - 1162463 - R 90 -12.7 -3.47392 | opp_overlap 1162463 1162459, overlap 1162460 TAAAGTAAAAAATTA GGGGCGA CAAC TCGCCCC TTAACTTTGCCCATT Shew185_0973 1166277 - 1162543 - | B12-dependent methionine synthase TERM 1277 1166421 - 1166405 - H 70 -8.1 -3.66999 | opp_overlap 1166404 1166399 1166419, overlap 1166413 AGTGAGTGATCTAAA TTAGCTA ACT TAGCTAA CTTAGCTATGCTAAG TERM 1278 1166986 - 1166997 + G 70 -2.2 -4.89393 | TCTGAGTCAAGGCCA TTGC AGGC GCAG TTTTTGTCGGGTTTA Shew185_0974 1166743 - 1167474 + | phosphoglycerate mutase TERM 1279 1168224 - 1168234 + GF 73 -8.2 -3.90588 | opp_overlap 1168212 ATATTGAGCGTTTAT CGCC CAA GGCG TTTGCTTGCCGCGTC TERM 1280 1168254 - 1168278 + GF 75 -5.7 -4.54727 | CTTGCCGCGTCGCCG TAGTGCAGC AAGACAC GCCGCACTA TTTTGATTTAACCAC TERM 1281 1168616 - 1168626 + GF 73 -5.4 -4.48713 | opp_overlap 1168607 AATTTAGCCAGCGCC CTGT GCG ACAG TTTATTGTTGATCCA Shew185_0975 1167944 - 1168837 + | ABC transporter related Shew185_0976 1168806 - 1169963 + | transport system permease protein Shew185_0977 1170129 - 1171211 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Shew185_0978 1171318 - 1172106 + | cobalamin synthase Shew185_0979 1172103 - 1172723 + | cobalbumin biosynthesis protein Shew185_0980 1172912 - 1174492 + | cobyric acid synthase Shew185_0981 1174586 - 1175209 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 1282 1175559 - 1175549 - g 75 -5.4 -4.82901 | CGGTTTGCATAAAAA CATC ATG GATG GGTATCGCTACATAG Shew185_0982 1175334 - 1176368 + | hypothetical protein Shew185_0983 1176392 - 1177219 + | periplasmic binding protein TERM 1283 1177252 - 1177227 - T 100 -15.5 -5.27335 | opp_overlap 1177227 CGCGTTAAATAAAAA CGCCTGACAGA TTAT TCCGTCAGGCG TTTAGTCCGATGTCG TERM 1284 1177227 - 1177252 + T 95 -13.3 -3.75665 | opp_overlap 1177227 CGCGTTAAATAAAAA CGCCTGACAGA TTAT TCCGTCAGGCG TTTAGTCCGATGTCG Shew185_0984 1178674 - 1177283 - | aldehyde dehydrogenase TERM 1285 1178582 - 1178570 - G 73 -4.8 -4.74103 | TCGCCAACTTAAAAA TGCC TGATG GGCA GATTCTATCGCCTGC TERM 1286 1178724 - 1178710 - R 77 -8.6 -3.93383 | CGAATAGAGAGTAAA TGCCAA CTC TTGGCA TCGAGGGTGGAAATA Shew185_0985 1179926 - 1178811 - | glycerol dehydrogenase Shew185_0986 1180475 - 1180993 + | cell division protein ZipA Shew185_0987 1181118 - 1181513 + | GCN5-related N-acetyltransferase Shew185_0988 1181784 - 1182167 + | hypothetical protein Shew185_0989 1183634 - 1182177 - | GntR family transcriptional regulator TERM 1287 1182958 - 1182946 - G 100 -10.5 -4.52589 | opp_overlap 1182944 TTTTGCGAGAGAAAA GCGCC TAA GGCGC CGTCGTATCCGGGTT Shew185_0990 1183752 - 1184210 + | GCN5-related N-acetyltransferase TERM 1288 1184258 - 1184287 + F 79 -10.9 -3.17797 | opp_overlap 1184258 TGCTAACAATTTAAA TCCTAATGCTAAA GGCT TTCAGCATTAGGA TTAGATCTCTATGAC TERM 1289 1184287 - 1184258 - f 100 -13.1 -3.85389 | opp_overlap 1184258 TGCTAACAATTTAAA TCCTAATGCTAAA GGCT TTCAGCATTAGGA TTAGATCTCTATGAC TERM 1290 1184604 - 1184573 - f 84 -2.2 -5.8187 | opp_overlap 1184583 1184583 GAGTTAATAAAAAAA TTAAAGTCGTGGGG CTTC CCCCTTATCTTTAA TTAAGAGTCGACCCA TERM 1291 1184583 - 1184594 + F 71 -7.2 -3.90298 | opp_overlap 1184573, overlap 1184583 AAAAATTAAAGTCGT GGGG CTTC CCCC TTATCTTTAATTAAG Shew185_0992 1185253 - 1185597 + | hypothetical protein TERM 1292 1185741 - 1185704 - T 89 -9.2 -4.67755 | opp_overlap 1185704 ATAGTTACTGAAAAA TAGCCTCTGAATCGTC GTTACT GACACTTCTGAGGCTA TTTTTATGTAGAGCA TERM 1293 1185704 - 1185741 + T 86 -7.7 -4.96848 | opp_overlap 1185704 ATAGTTACTGAAAAA TAGCCTCTGAATCGTCG TTAC TGACACTTCTGAGGCTA TTTTTATGTAGAGCA TERM 1294 1186170 - 1186158 - T 79 -6.9 -4.63928 | ACAGGATGTGAAAAA GCGGC CAT GCCAC CAACGATTACTTCTA TERM 1295 1186359 - 1186347 - T 79 -5.5 -4.9725 | overlap 1186349 ATGCTGAGATAAAAA TGCCG TGG CGACA TCATGGATGATGGCG Shew185_0993 1187151 - 1186750 - | hypothetical protein Shew185_0994 1188292 - 1187246 - | hypothetical protein TERM 1296 1188358 - 1188375 + r 83 -12.7 -2.74371 | opp_overlap 1188358, overlap 1188355 CTAGGGTGTAAAAAA GGTCGCC CGTA GGCGACC TGATGTTAAAGACTT TERM 1297 1188375 - 1188358 - R 100 -12.7 -5.02074 | opp_overlap 1188358 1188355 CTAGGGTGTAAAAAA GGTCGCC CGTA GGCGACC TGATGTTAAAGACTT Shew185_0995 1189427 - 1188396 - | dihydroorotase TERM 1298 1188642 - 1188656 + g 76 -7 -4.34559 | opp_overlap 1188637 1188608, overlap 1188634 CGTGTACGAACCCGC GCAGCC ACA GGCGGC TTCTTTCTTATCTTT TERM 1299 1189641 - 1189654 + H 76 -6.7 -4.47551 | opp_overlap 1189636 TCGATTTAAACCCCA GTGTC CGCG GACAC TTTTATCAATTAAAT Shew185_0996 1189759 - 1191066 + | RND family efflux transporter MFP subunit Shew185_0997 1191176 - 1191439 + | hypothetical protein Shew185_0998 1191509 - 1192252 + | ABC transporter related Shew185_0999 1192264 - 1193574 + | hypothetical protein Shew185_1000 1193585 - 1194784 + | hypothetical protein TERM 1300 1194830 - 1194857 + F 93 -9.3 -5.24551 | opp_overlap 1194830 AAAAGCCCAATAAAA GTGCGATAACA ATAGGA TGTTATTGCAC TTTTTGTTACTTTAC TERM 1301 1194857 - 1194830 - f 83 -7.1 -4.70613 | opp_overlap 1194830 AAAAGCCCAATAAAA GTGCGATAACA ATAGGA TGTTATTGCAC TTTTTGTTACTTTAC Shew185_1001 1194908 - 1196416 + | two component, sigma54 specific, Fis family transcriptional regulator Shew185_1002 1196523 - 1198211 + | integral membrane sensor signal transduction histidine kinase TERM 1302 1198239 - 1198256 + F 95 -11.3 -5.12971 | opp_overlap 1198233 GTATCAATACCGCAA TGCGACC TTAG GGTCGCA TTTTTATTGCCTCTT TERM 1303 1198322 - 1198336 + F 75 -5.7 -4.7416 | overlap 1198332 CGCCTCTTAGCGTAT TAGCC AAATG GGCTA TTTTTGCCATTTTAC Shew185_1003 1198507 - 1198917 + | curli production assembly/transport component CsgE, putative Shew185_1004 1198928 - 1199323 + | curli production assembly/transport component CsgF, putative TERM 1304 1199531 - 1199544 + G 71 -6.7 -4.14243 | AATATAAACCACAGG CGAAC GTGA GTTCG TTTTCGACTGCGGTG Shew185_1005 1199323 - 1200129 + | curli production assembly/transport component CsgG TERM 1305 1200243 - 1200211 - T 100 -14.3 -4.28254 | opp_overlap 1200216, overlap 1200216 TGTGAATATGTAAAA GAAAACCGAGCCAGT TAA ACTGACTCGGTTTTT TATTGGATTAATTTC TERM 1306 1200238 - 1200216 - T 100 -14.2 -5.11836 | opp_overlap 1200216, overlap 1200211 ATATGTAAAAGAAAA CCGAGCCAGT TAA ACTGACTCGG TTTTTTATTGGATTA TERM 1307 1200216 - 1200238 + T 100 -12 -5.5074 | opp_overlap 1200211 1200216 ATATGTAAAAGAAAA CCGAGCCAGT TAA ACTGACTCGG TTTTTTATTGGATTA Shew185_1006 1200869 - 1200300 - | TetR family transcriptional regulator Shew185_1007 1202347 - 1200923 - | aldehyde dehydrogenase TERM 1308 1202443 - 1202458 + H 83 -9 -3.99405 | opp_overlap 1202443 1202441 1202440 ACAGATAAATAAGTA CCGACT GATT AGTCGG TTTATCCTAGCTTGC TERM 1309 1202458 - 1202443 - H 70 -9 -3.09925 | opp_overlap 1202443, overlap 1202441 1202440 ACAGATAAATAAGTA CCGACT GATT AGTCGG TTTATCCTAGCTTGC TERM 1310 1202903 - 1202917 + G 80 -2.8 -5.52023 | GCAAACTGGTTTACG CCTG CTGAGGT CAGG TTTTTTGTTGATAAT Shew185_1008 1202579 - 1202962 + | hypothetical protein Shew185_1009 1203004 - 1203435 + | UspA domain-containing protein TERM 1311 1203484 - 1203468 - f 83 -9.4 -3.93262 | opp_overlap 1203468 CTCAATAAATTCAAA GGACGC TTATT GCGTCC TTTCTTTTTGATTGA TERM 1312 1203468 - 1203484 + F 93 -9.4 -4.96773 | opp_overlap 1203468 CTCAATAAATTCAAA GGACGC TTATT GCGTCC TTTCTTTTTGATTGA TERM 1313 1203836 - 1203824 - g 77 -6.3 -4.65895 | TTGTCGATGCAAAAA TGCAA AGT TTGCA GCAGGAAATGCAGCA Shew185_1010 1203598 - 1204050 + | UspA domain-containing protein TERM 1314 1204077 - 1204094 + T 72 -8.5 -3.53444 | opp_overlap 1204077 ATAGGTTTAAGTAAA GAGCTTT AGAT AAAGCTC TTTGAGAAAACCTAG TERM 1315 1204094 - 1204077 - T 77 -8.5 -3.91352 | opp_overlap 1204077 ATAGGTTTAAGTAAA GAGCTTT AGAT AAAGCTC TTTGAGAAAACCTAG Shew185_1011 1204963 - 1204106 - | extracellular solute-binding protein Shew185_1012 1205656 - 1205105 - | hypothetical protein Shew185_1013 1205864 - 1206199 + | hypothetical protein TERM 1316 1206486 - 1206467 - T 80 -2.1 -5.626 | gap 1, overlap 1206469 CATTTCATAAAAAAA TAGGC-GG CAAAT CCTGCCCA ACTTAACAGTAGTAG Shew185_1014 1206795 - 1206451 - | hypothetical protein Shew185_1015 1207895 - 1207029 - | hemin importer ATP-binding subunit Shew185_1016 1208922 - 1207906 - | transport system permease protein Shew185_1017 1210080 - 1209085 - | periplasmic binding protein Shew185_1018 1210780 - 1210343 - | biopolymer transport protein ExbD/TolR Shew185_1019 1211532 - 1210777 - | MotA/TolQ/ExbB proton channel Shew185_1020 1212569 - 1211697 - | TonB family protein Shew185_1021 1212932 - 1215022 + | TonB-dependent heme/hemoglobin receptor family protein Shew185_1022 1215106 - 1215717 + | hypothetical protein Shew185_1023 1215768 - 1216325 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 1317 1216344 - 1216382 + F 100 -17.7 -5.48213 | opp_overlap 1216351, overlap 1216346 GCGCTAAGCGATGGC AATAAAACCAACCCGCA CTCGC TGCGGGTTGGTTTTATG TTTTTCTTTTGAGTA TERM 1318 1216346 - 1216380 + F 100 -20.3 -4.3613 | opp_overlap 1216351, overlap 1216344 GCTAAGCGATGGCAA TAAAACCAACCCGCA CTCGC TGCGGGTTGGTTTTA TGTTTTTCTTTTGAG TERM 1319 1216375 - 1216351 - f 100 -15.8 -4.65916 | opp_overlap 1216346 1216344 GCGATGGCAATAAAA CCAACCCGCA CTCGC TGCGGGTTGG TTTTATGTTTTTCTT Shew185_1024 1216546 - 1218450 + | lipid ABC transporter ATPase/inner membrane protein TERM 1320 1218500 - 1218462 - T 87 -6.1 -5.18643 | gap 2, opp_overlap 1218462 TTAAGTAAAATAAAA CCCAGT-TGCTAGC-CGAA ACG CTCAAGCTAGCTCACTGGG TCTTTTATTGTGCGT Shew185_1025 1220173 - 1218572 - | AMP-dependent synthetase and ligase TERM 1321 1220594 - 1220624 + r 95 -14 -3.62032 | opp_overlap 1220595, overlap 1220595 AGTGTTTGATTTAGA ACGGCGCTTGGG TTGACTC CCCAAGCGCCGA TTTAGCGGTTAATGT TERM 1322 1220623 - 1220595 - R 100 -17.5 -3.35679 | opp_overlap 1220594 1220595 GTGTTTGATTTAGAA CGGCGCTTGGG TTGACTC CCCAAGCGCCG ATTTAGCGGTTAATG TERM 1323 1220595 - 1220623 + r 100 -17.5 -2.76737 | opp_overlap 1220595, overlap 1220594 GTGTTTGATTTAGAA CGGCGCTTGGG TTGACTC CCCAAGCGCCG ATTTAGCGGTTAATG Shew185_1026 1222142 - 1220670 - | cytochrome c oxidase cbb3 type accessory protein FixG TERM 1324 1222261 - 1222292 + r 75 -5.9 -4.79756 | overlap 1222263 GAGCTAAGTGGTAGT CACGATATATCAC ACATTG GCGATATATCGCG TTTTTAGCTTGTGTG Shew185_1027 1223775 - 1222315 - | Fis family transcriptional regulator Shew185_1028 1224157 - 1226742 + | TonB-dependent receptor TERM 1325 1226842 - 1226828 - T 95 -11.4 -4.77157 | opp_overlap 1226828 TGAAGTGAGCAAAAA GGCTGC AGT GCAGCC TTTTTTATTGGTTAT TERM 1326 1226828 - 1226842 + T 100 -11.4 -5.57396 | opp_overlap 1226828 TGAAGTGAGCAAAAA GGCTGC AGT GCAGCC TTTTTTATTGGTTAT Shew185_1029 1227416 - 1226865 - | thiol:disulfide interchange protein, putative TERM 1327 1228857 - 1228877 + G 74 -9 -3.75229 | TCTGTATGACGATTT GGGCGTGA CCTTA TCACGTCC TTTCAATGTACTTTC Shew185_1030 1227652 - 1229193 + | peptidase S10 serine carboxypeptidase Shew185_1031 1229327 - 1229941 + | lysine exporter protein LysE/YggA TERM 1328 1230002 - 1229973 - T 100 -12.3 -4.15222 | opp_overlap 1229979, overlap 1229959 1229979 ATTTGTTTCAACAAA CAAAAACGCCATC AATC GATGGCGTTTTTT ATGTTATCGCTATGC TERM 1329 1229996 - 1229979 - T 100 -11.3 -5.47159 | opp_overlap 1229979, overlap 1229973 TTCAACAAACAAAAA CGCCATC AATC GATGGCG TTTTTTATGTTATCG TERM 1330 1229979 - 1229996 + T 100 -11.3 -5.5208 | opp_overlap 1229979 1229973 TTCAACAAACAAAAA CGCCATC AATC GATGGCG TTTTTTATGTTATCG Shew185_1032 1230351 - 1230031 - | hypothetical protein Shew185_1033 1230988 - 1230425 - | pilin, putative Shew185_1034 1231176 - 1231841 + | uracil-DNA glycosylase TERM 1331 1231869 - 1231897 + T 89 -11.9 -3.59979 | opp_overlap 1231874, overlap 1231874 GGATTTGAGGCAATA AAAAAGGTCTTAC TGA GTAAGACCTTTTC TTTGGGCTAAAAACG TERM 1332 1231874 - 1231892 + T 100 -11.8 -4.88918 | opp_overlap 1231874, overlap 1231869 TGAGGCAATAAAAAA GGTCTTAC TGA GTAAGACC TTTTCTTTGGGCTAA TERM 1333 1231892 - 1231874 - T 100 -11.8 -5.4833 | opp_overlap 1231869 1231874 TGAGGCAATAAAAAA GGTCTTAC TGA GTAAGACC TTTTCTTTGGGCTAA Shew185_1035 1232921 - 1231926 - | polyprenyl synthetase TERM 1334 1232808 - 1232791 - G 83 -7.1 -4.8143 | TTAATAATGTAAAAA CCTAATT GATT AATTAGG GCGACATCTGATTCA TERM 1335 1233226 - 1233204 - g 74 -9.8 -3.54488 | opp_overlap 1233204 1233199 1233206, overlap 1233202 TGGTGGTAAACAACA CCGTGTAGCC GAA GGCCACACTG TTCGTTTAGAAAAGT Shew185_1036 1233169 - 1233480 + | 50S ribosomal protein L21 Shew185_1037 1233495 - 1233749 + | 50S ribosomal protein L27 TERM 1336 1233771 - 1233801 + F 91 -6 -5.39755 | opp_overlap 1233777, overlap 1233777 AACCTAGCTTATACT GTTAAAGCCCCGCC ATT GGTGGGGCTTTCTG TTTTTTGTGCTTCTA TERM 1337 1233777 - 1233795 + F 100 -13.8 -4.68607 | opp_overlap 1233777, overlap 1233771 GCTTATACTGTTAAA GCCCCGCC ATT GGTGGGGC TTTCTGTTTTTTGTG TERM 1338 1233795 - 1233777 - f 88 -11.6 -3.59262 | opp_overlap 1233777 1233771 GCTTATACTGTTAAA GCCCCGCC ATT GGTGGGGC TTTCTGTTTTTTGTG Shew185_1038 1233964 - 1235133 + | GTPase ObgE TERM 1339 1235533 - 1235546 + G 70 -2.3 -4.87273 | overlap 1235540 GTCTTCATGATTGGC CTGTC TTGT GCCAG TTTTTGTCACCTGTT TERM 1340 1235634 - 1235645 + G 71 -4.4 -4.68846 | overlap 1235633 GGTACGTTTAGCGAT TGCT AAGC AGCA TTTTAATTTATTGGT TERM 1341 1235668 - 1235678 + G 71 -8.2 -3.73402 | TTATTGGTTAACTTT GCCG TCA CGGC TTTCGTCACCAGTAT Shew185_1039 1235161 - 1235922 + | hypothetical protein Shew185_1040 1235919 - 1236392 + | hypothetical protein Shew185_1041 1236420 - 1236902 + | dihydrofolate reductase Shew185_1042 1237125 - 1237538 + | hypothetical protein TERM 1342 1237720 - 1237701 - T 100 -12.2 -5.37345 | opp_overlap 1237701 TTGAATCAGAAAAAA TGCCGAAC TTAA GTTCGGCA TTTTTTATGGCCCTA TERM 1343 1237701 - 1237720 + T 100 -12.2 -5.252 | opp_overlap 1237701 TTGAATCAGAAAAAA TGCCGAAC TTAA GTTCGGCA TTTTTTATGGCCCTA TERM 1344 1237803 - 1237819 + T 74 -9.3 -3.51976 | opp_overlap 1237803, overlap 1237799 TTGGCCCAAAAGAAA GGGCCGC TAA GCGACCC TTGGTTTAGAAGATT TERM 1345 1237819 - 1237803 - T 93 -11.5 -4.64861 | opp_overlap 1237799 1237803 TTGGCCCAAAAGAAA GGGCCGC TAA GCGACCC TTGGTTTAGAAGATT Shew185_1043 1239870 - 1237849 - | methyl-accepting chemotaxis sensory transducer TERM 1346 1238570 - 1238588 + g 77 -3 -5.27779 | overlap 1238558 1238567 TCTGTGGTTGCAGTG GCCACTTG GTC CACTTGGC TTTTTTGCTCTTGAA Shew185_1044 1240791 - 1239967 - | diadenosine tetraphosphatase TERM 1347 1240167 - 1240150 - G 80 -8.5 -4.42062 | opp_overlap 1240150 CAGGGGCGAAACAAA CTCAAAC CAAG GTTTGAG TTGTGGATTAGTACA Shew185_1045 1241193 - 1240813 - | ApaG TERM 1348 1241233 - 1241218 - R 79 -10.4 -3.53224 | TAGGCTCTGGTTAAA GGGCAC CTAA GTGCCC AGACATATTTATGCT Shew185_1046 1242048 - 1241242 - | dimethyladenosine transferase Shew185_1047 1243050 - 1242064 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1349 1242984 - 1242948 - G 100 -15.9 -3.87815 | opp_overlap 1242951, overlap 1242955 CTGGATCCGCACAAA CGACTAACTCAGCAGGC CAA GCCTGCTGAGCGAGTTG TACGACTAAATCGGG TERM 1350 1242951 - 1242981 + g 93 -14 -3.31461 | opp_overlap 1242948 1242955 GATCCGCACAAACGA CTAACTCAGCAGGC CAA GCCTGCTGAGCGAG TTGTACGACTAAATC TERM 1351 1242977 - 1242955 - G 100 -17.8 -3.35467 | opp_overlap 1242951, overlap 1242948 CGCACAAACGACTAA CTCAGCAGGC CAA GCCTGCTGAG CGAGTTGTACGACTA Shew185_1048 1244361 - 1243057 - | SurA domain-containing protein TERM 1352 1243162 - 1243202 + g 74 -4 -4.94222 | gap 2 GCGACGGAAGATCAA CTGGTGCGCACGGTTACTGT TGA ACTG-ATCCGTG-GCATCGG TTTTTCTGCGTTCTT TERM 1353 1243262 - 1243274 + g 71 -4.1 -4.66953 | GTACGGAATGGCTCA CTGAT CTG GTCAG TTTTTAAACTGTTAA TERM 1354 1243937 - 1243949 + g 75 -7.7 -4.15788 | TGAATACGTTGAATT TCACC TAA GGTGA TTTCTTCGCGCAATT TERM 1355 1244557 - 1244569 + r 70 -7.7 -3.68222 | CTCATTAACCTGTTT GGACT CTC AGTCC TTGTTGAGGTTCAGC Shew185_1049 1246901 - 1244604 - | organic solvent tolerance protein Shew185_1050 1247019 - 1248104 + | aminoglycoside phosphotransferase TERM 1356 1248287 - 1248306 + G 71 -6.4 -4.13945 | CATAAATTAGTCGAG GCGCTG GGCGATGG CAGCGC TTTTGGGGTGCGAAT TERM 1357 1248688 - 1248700 + G 71 -9.1 -3.56594 | overlap 1248683 1248695 GGCCCAAGGCCGAGT CAGCG GCG CGCTG TTTCACAGGCTTTGG Shew185_1051 1248101 - 1248778 + | nucleotidyl transferase TERM 1358 1249436 - 1249422 - g 77 -6.4 -4.65747 | CAAGTGGCAACAAAA CATCGA TTA CCGATG CCTACAGTTTGCTGG Shew185_1052 1248848 - 1249636 + | Dna-J like membrane chaperone protein Shew185_1053 1249678 - 1250310 + | hypothetical protein Shew185_1054 1250346 - 1251296 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Shew185_1055 1251322 - 1251702 + | hypothetical protein TERM 1359 1251749 - 1251720 - T 85 -8.7 -4.371 | gap 1, opp_overlap 1251720 1251718 1251715 1251712 TGCATGATATGAAAA TGGCGTATAG-TGA AGG TCAGCTATGCGCCA TATCTCTATATATTT TERM 1360 1251720 - 1251749 + T 79 -10.9 -3.11329 | gap 1, opp_overlap 1251720, overlap 1251718 1251715 1251712 TGCATGATATGAAAA TGGCGTATAG-TGA AGG TCAGCTATGCGCCA TATCTCTATATATTT Shew185_1056 1254060 - 1251763 - | TPR repeat-containing protein TERM 1361 1252155 - 1252188 + g 75 -6.1 -4.58685 | gap 1, overlap 1252152 GAAAGCGTTTATCGG GAACGGCT-TGGCT GGCGCTG AGCCGCAGCTGTTC TTTTTCGGCCAATTT Shew185_1057 1255510 - 1254050 - | hypothetical protein TERM 1362 1255700 - 1255686 - R 73 -5.7 -4.64766 | overlap 1255675 CTCAGATCTCAAAAA TCAGG ATCGA CCTGA AAGCGCATCCGCTCA Shew185_1058 1257403 - 1255679 - | pseudouridine synthase TERM 1363 1255792 - 1255806 + g 73 -10 -3.36073 | overlap 1255791 TGCCGTAGAGGTCGT CACCGA CAA TCGGTG TATTTAGCCCCTCTG TERM 1364 1257715 - 1257689 - R 81 -7.4 -4.65895 | gap 1, opp_overlap 1257689 GTGTGCATTGAAAAA GGGAAATAGCG TTGAAG CGC-ATTTCCC TTTGATTTGTAGCTT TERM 1365 1257689 - 1257715 + r 77 -8.1 -4.15669 | gap 1, opp_overlap 1257689 GTGTGCATTGAAAAA GGGAAATAGCGT TGAA GCGC-ATTTCCC TTTGATTTGTAGCTT Shew185_1059 1258940 - 1257765 - | phosphoribosylglycinamide formyltransferase 2 Shew185_1060 1259227 - 1259607 + | hypothetical protein Shew185_1061 1259609 - 1260754 + | secretion protein HlyD family protein TERM 1366 1260835 - 1260820 - f 79 -9 -3.8709 | opp_overlap 1260820 AAAGGTTGGTATAAA GTCCAG TTCG CTGGAC TTTTTTGTGGCAATT TERM 1367 1260820 - 1260835 + F 93 -9 -5.25803 | opp_overlap 1260820 AAAGGTTGGTATAAA GTCCAG TTCG CTGGAC TTTTTTGTGGCAATT Shew185_1062 1260842 - 1262392 + | ATPase central domain-containing protein TERM 1368 1262432 - 1262480 + T 83 -9 -4.04206 | gap 1, overlap 1262434 CTAGCTAGATCCGGC TGA-CGGCTTTAGCGGTATCACT GCCC AGTGATACCGCCAATGCTGCTGA TTTCTATCAGAATGA TERM 1369 1262434 - 1262477 + T 91 -13.2 -3.06418 | overlap 1262432 AGCTAGATCCGGCTG ACGGCTTTAGCGGTATCACT GCCC AGTGATACCGCCAATGCTGC TGATTTCTATCAGAA Shew185_1063 1263629 - 1262499 - | sulfate ABC transporter, ATPase subunit TERM 1370 1263300 - 1263310 + g 73 -2.4 -5.04249 | CTTATGAATTTCTGC CGCC GAA GGCC TTTGTTTTTTCGGCA Shew185_1064 1264492 - 1263626 - | sulfate ABC transporter, inner membrane subunit CysW Shew185_1065 1265347 - 1264502 - | sulfate ABC transporter, inner membrane subunit CysT TERM 1371 1264534 - 1264544 + g 71 -6.8 -4.1711 | opp_overlap 1264516 GGCGCAGATAACGCG CCTG CCA CAGG TTTATTAGCAGTAAT Shew185_1066 1266550 - 1265543 - | sulfate ABC transporter, periplasmic sulfate-binding protein Shew185_1067 1266763 - 1267641 + | cysteine synthase B TERM 1372 1267685 - 1267726 + T 86 -11.9 -3.27544 | gap 1, opp_overlap 1267691 1267697, overlap 1267686 1267687 1267691 1267697 ACTACAAGCATTCTT CA-TCAATAAAAATGGGCGG AAT TCGCCCATTTTTATTGACTC TTCATGATCATTTTG TERM 1373 1267686 - 1267724 + T 100 -17 -3.19138 | opp_overlap 1267691 1267697, overlap 1267685 1267687 1267691 1267697 CTACAAGCATTCTTC ATCAATAAAAATGGGCGG AAT TCGCCCATTTTTATTGAC TCTTCATGATCATTT TERM 1374 1267687 - 1267723 + T 100 -20.5 -2.5076 | opp_overlap 1267691 1267697, overlap 1267686 1267685 1267691 1267697 TACAAGCATTCTTCA TCAATAAAAATGGGCGG AAT TCGCCCATTTTTATTGA CTCTTCATGATCATT TERM 1375 1267719 - 1267691 - T 100 -14.8 -3.1505 | opp_overlap 1267691 1267687 1267686 1267685 1267697, overlap 1267697 AGCATTCTTCATCAA TAAAAATGGGCG GAATT CGCCCATTTTTA TTGACTCTTCATGAT TERM 1376 1267691 - 1267719 + T 100 -15.5 -3.20616 | opp_overlap 1267691 1267697, overlap 1267687 1267686 1267685 1267697 AGCATTCTTCATCAA TAAAAATGGGCGG AAT TCGCCCATTTTTA TTGACTCTTCATGAT TERM 1377 1267697 - 1267713 + T 93 -10.1 -5.12971 | opp_overlap 1267691 1267697, overlap 1267691 1267687 1267686 1267685 CTTCATCAATAAAAA TGGGCGG AAT TCGCCCA TTTTTATTGACTCTT TERM 1378 1267713 - 1267697 - T 93 -9.4 -5.1356 | opp_overlap 1267697 1267691 1267687 1267686 1267685, overlap 1267691 CTTCATCAATAAAAA TGGGCG GAATT CGCCCA TTTTTATTGACTCTT Shew185_1068 1268270 - 1267734 - | hypothetical protein Shew185_1069 1268476 - 1268781 + | hypothetical protein Shew185_1070 1270187 - 1268919 - | integral membrane sensor signal transduction histidine kinase Shew185_1071 1270912 - 1270199 - | two component transcriptional regulator Shew185_1072 1271322 - 1270912 - | hypothetical protein Shew185_1073 1272191 - 1271328 - | MltA-interacting MipA family protein TERM 1379 1271874 - 1271858 - G 72 -10.9 -2.71831 | overlap 1271857 1271855 GGTTCAAAAAGATAT TCGATGG ATC CCATCGA TAGAAATAGGCTCTA TERM 1380 1272497 - 1272474 - R 76 -7.4 -4.20868 | opp_overlap 1272474, overlap 1272452 1272450 TCTTGAAAAGAATAA TGCCATTCGC GGTT GTGAACGGCA TTTAATGAAGCTGAA Shew185_1074 1272803 - 1272567 - | hypothetical protein TERM 1381 1273119 - 1273140 + H 82 -3.7 -5.41143 | opp_overlap 1273123, overlap 1273123 TAGGCTAAAATAGGC TAAATCTGG CATC CCAGAGTTG TTTTTTTCAAAAGTG TERM 1382 1273291 - 1273277 - H 75 -2.8 -5.35222 | overlap 1273279 1273287 AAAAGTTATAAAAAA TTGCAT AAA ATGCGA TATGACGCAGGTTGT TERM 1383 1273374 - 1273384 + H 85 -2.6 -5.80951 | ACTTAGGACTTGGTT TATT TTT AATA TTTTTTATTTTAAGT Shew185_1075 1273569 - 1274132 + | GPR1/FUN34/yaaH family protein TERM 1384 1274178 - 1274161 - T 93 -9.9 -4.69664 | opp_overlap 1274161 GATAGTAGTGAAAAA GGCTGAT GCAG ATCAGCC TTTTTTATGGGTGTT TERM 1385 1274161 - 1274178 + T 100 -9.9 -5.30686 | opp_overlap 1274161 GATAGTAGTGAAAAA GGCTGAT GCAG ATCAGCC TTTTTTATGGGTGTT Shew185_1076 1274675 - 1274205 - | hypothetical protein Shew185_1077 1274987 - 1275325 + | hypothetical protein TERM 1386 1275422 - 1275441 + T 71 -9.4 -2.79327 | opp_overlap 1275415, overlap 1275421 TTTAATAACGACTTA CGCTATTA CCGC TAATAGCG ATTTCGCTCCGCTGG Shew185_1078 1275849 - 1275433 - | glyoxalase/bleomycin resistance protein/dioxygenase Shew185_1079 1276520 - 1275906 - | NADPH-dependent FMN reductase TERM 1387 1276297 - 1276315 + g 77 -6.6 -4.52143 | GTGATAAGCACTAGC GCATCGGC TTC GTCGACGC TTTGTTCTATTTCGG Shew185_1080 1276668 - 1277291 + | putative transcriptional regulator Shew185_1081 1278323 - 1277397 - | TPR repeat-containing protein TERM 1388 1278410 - 1278432 + H 79 -10.6 -3.10715 | TGTGATGCCCCTCTA GTTCGGCTTG CTA TGAGCCGAAC TTGCATCCTGCTAGA TERM 1389 1278555 - 1278537 - g 76 -11.7 -2.91912 | opp_overlap 1278532 1278529 GTACCCAGTTACACA CGCACCG TAAAG CGGTGCG TGAACTGCTATTATC Shew185_1082 1278422 - 1279192 + | pseudouridine synthase Shew185_1083 1280551 - 1279358 - | globin TERM 1390 1280761 - 1280790 + r 70 -5.8 -4.44915 | overlap 1280762 AAATAGAAGGGAGTT TGACTGCAAC AGCTAAAATG GTTGCAGTCG TTTTGTGGGTGATTG Shew185_1084 1282438 - 1280813 - | methyl-accepting chemotaxis sensory transducer TERM 1391 1282581 - 1282595 + r 88 -11.4 -3.77831 | opp_overlap 1282581 TTAGATACAAAAAAA CCTCGC TAA GCGAGG TTTAAATGTTGGTAC TERM 1392 1282595 - 1282581 - R 100 -11.4 -5.76633 | opp_overlap 1282581 TTAGATACAAAAAAA CCTCGC TAA GCGAGG TTTAAATGTTGGTAC TERM 1393 1282952 - 1282968 + r 70 -9.5 -2.62616 | opp_overlap 1282954, overlap 1282954 TCGAACCAGGGACAC GAGGATT TTC AATCCTC TGCTCTACCGACTGA TERM 1394 1283198 - 1283216 + r 77 -10.3 -3.3573 | opp_overlap 1283198 AACAAAGCAAAAAAA TGCCCCT ATTAA AGGGGCA TTCTCGGCTAGTTTG TERM 1395 1283216 - 1283198 - R 100 -10.3 -5.77856 | opp_overlap 1283198 AACAAAGCAAAAAAA TGCCCCT ATTAA AGGGGCA TTCTCGGCTAGTTTG Shew185_1085 1283985 - 1283224 - | putative lipoprotein Shew185_1086 1284108 - 1285082 + | RluA family pseudouridine synthase Shew185_1087 1285083 - 1285817 + | hypothetical protein TERM 1396 1286184 - 1286202 + G 77 -8.8 -4.18018 | CAAGCTGGCATTCGC GTGAGTGC GCT GCGCTCGC TTTTGAGTCAAGAGC TERM 1397 1286410 - 1286400 - g 80 -4.6 -5.03145 | CAAGCGTTGAAAAAA GCCG GCG CGAC CAAAGAGTTGATGGA Shew185_1088 1286016 - 1288589 + | ATPase TERM 1398 1288807 - 1288773 - T 100 -14.4 -4.3534 | opp_overlap 1288778, overlap 1288778 CTTCAAGTACTAAAA CGAAAGGAGCCGAGTT TTT AACTCGGCTCCTTTTT TATTGCATCAGCGTT TERM 1399 1288802 - 1288778 - T 100 -18.7 -4.24384 | opp_overlap 1288778, overlap 1288773 AGTACTAAAACGAAA GGAGCCGAGTT TTT AACTCGGCTCC TTTTTTATTGCATCA TERM 1400 1288778 - 1288802 + T 100 -18.7 -5.4833 | opp_overlap 1288778 1288773 AGTACTAAAACGAAA GGAGCCGAGTT TTT AACTCGGCTCC TTTTTTATTGCATCA Shew185_1089 1289328 - 1288861 - | hypothetical protein Shew185_1090 1289423 - 1290274 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 1401 1290710 - 1290696 - f 73 -8.6 -3.71917 | ACGCGAAACGGGAAA TGCGTA GAA TACGCA GCCCTAGCCAACTGG TERM 1402 1292820 - 1292793 - f 72 -4.3 -4.74706 | TTGAATATTCAAAAA GTAAATTATTC TTTGCT GAATAGTTTAC GTCTAAGGCGCGTCC TERM 1403 1292884 - 1292914 + F 90 -13.4 -2.90194 | opp_overlap 1292872 1292871 1292867, overlap 1292887 1292893 AAGCTGGTCGCAATG CGACCCAGGTGAGT GAA ACTCATTTGGGTTG TATGGTTAAGCGACT TERM 1404 1292887 - 1292911 + F 88 -11.5 -3.59946 | opp_overlap 1292872 1292871 1292867, overlap 1292884 1292893 CTGGTCGCAATGCGA CCCAGGTGAGT GAA ACTCATTTGGG TTGTATGGTTAAGCG TERM 1405 1293402 - 1293390 - f 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 1406 1294198 - 1294182 - f 86 -9.4 -4.08546 | overlap 1294195 ATGAGTAACGATAAA GGGGGT GAAAA ACCCCC TCGCCGAAAGACCAA TERM 1407 1294715 - 1294704 - f 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GCAC TGTG CAAACTCGCAAGAGG TERM 1408 1296122 - 1296104 - f 77 -10.3 -3.39142 | opp_overlap 1296104 TTGAGATGTAACTAA GCCAGCT GAATA AGCTGGC TTTTTTGCGTCTGTA TERM 1409 1296104 - 1296122 + F 93 -10.3 -5.14477 | opp_overlap 1296104 TTGAGATGTAACTAA GCCAGCT GAATA AGCTGGC TTTTTTGCGTCTGTA TERM 1410 1296946 - 1296974 + F 79 -8.9 -3.86346 | TTTGTGTGGTGGTCG CTATAGGTCTGTC TAC GAGAGACCCATAG TTTGTAAACCGCTCA Shew185_1091 1297083 - 1297349 + | sodium pump decarboxylase, gamma subunit TERM 1411 1297392 - 1297402 + G 74 -6.8 -4.4521 | overlap 1297389 ATTCTACGACGGCAG TGGC TAA GCCA TTATTTTTAACTGAT Shew185_1092 1297361 - 1299184 + | pyruvate carboxylase subunit B Shew185_1093 1299193 - 1300323 + | sodium ion-translocating decarboxylase, beta subunit TERM 1412 1300384 - 1300407 + T 89 -9.6 -4.25848 | opp_overlap 1300384 CAGTTTTATCACTAA GGCCAACTCA GTAT TGAATTGGCC TTTTGCTAAGCCGTT TERM 1413 1300407 - 1300384 - T 83 -11.8 -3.21416 | opp_overlap 1300384 CAGTTTTATCACTAA GGCCAACTCA GTAT TGAATTGGCC TTTTGCTAAGCCGTT Shew185_1094 1300580 - 1300413 - | hypothetical protein TERM 1414 1300734 - 1300749 + r 77 -10.4 -3.34609 | opp_overlap 1300734, overlap 1300732 1300728 CTGGATAATAAAAAA GACCGC CTAA GCGGTC TCTTGATTTACATCA TERM 1415 1300749 - 1300734 - R 100 -10.4 -5.55769 | opp_overlap 1300732 1300728 1300734 CTGGATAATAAAAAA GACCGC CTAA GCGGTC TCTTGATTTACATCA Shew185_1095 1302083 - 1300824 - | sodium:dicarboxylate symporter TERM 1416 1302316 - 1302292 - H 71 -5.1 -4.56775 | AGTTTGTTGTAAAAA GATTAAGTGAA ACA TTCAATTAACC CATGACAAACCCTAT TERM 1417 1302488 - 1302473 - g 81 -6.1 -4.93877 | CGCTATTAAACAAAA CCCCA GAGGCT TGGGG GGCGCTGGTCGCGGT Shew185_1096 1302376 - 1302801 + | hypothetical protein Shew185_1097 1303030 - 1305882 + | peptidase M16 domain-containing protein TERM 1418 1305965 - 1305998 + F 100 -13.9 -4.11216 | opp_overlap 1305968, overlap 1305968 1305970 ACCGGATTTACATCG AAAGACGGTGACAGC ATTA GCTGTCACCGTCTGC TTTTAACAGTACAAG TERM 1419 1305968 - 1305995 + F 100 -20 -3.09004 | opp_overlap 1305968, overlap 1305965 1305970 GGATTTACATCGAAA GACGGTGACAGC ATTA GCTGTCACCGTC TGCTTTTAACAGTAC TERM 1420 1305995 - 1305968 - f 100 -20 -3.71873 | opp_overlap 1305968 1305965 1305970 GGATTTACATCGAAA GACGGTGACAGC ATTA GCTGTCACCGTC TGCTTTTAACAGTAC TERM 1421 1305970 - 1305993 + F 100 -16.8 -3.10091 | opp_overlap 1305968, overlap 1305968 1305965 ATTTACATCGAAAGA CGGTGACAGC ATTA GCTGTCACCG TCTGCTTTTAACAGT TERM 1422 1306966 - 1306956 - g 71 -6.8 -4.25283 | opp_overlap 1306961 ATGCGGCCATCAAAA TGCC TTC GGCA AACTTTGCCAATATT TERM 1423 1307053 - 1307041 - g 75 -7.7 -4.23758 | overlap 1307044 ATTGCAGATTGAAAA CGAGT TTT ACTCG CCAATCCGTGCAAAA Shew185_1098 1306067 - 1307716 + | glutamate--cysteine ligase Shew185_1099 1307713 - 1308177 + | hypothetical protein Shew185_1100 1308307 - 1308960 + | hypothetical protein Shew185_1101 1310451 - 1309198 - | diguanylate cyclase TERM 1424 1310557 - 1310594 + r 70 -5.7 -4.3129 | opp_overlap 1310560, overlap 1310558 1310560 CGAAAATTGAAATAT AAACTGATATGAAACTG CGAA CAATTTCATATCAGTGA TTTTGGTACTAAATA TERM 1425 1310558 - 1310593 + r 70 -9.2 -3.18292 | opp_overlap 1310560, overlap 1310557 1310560 GAAAATTGAAATATA AACTGATATGAAACTG CGAA CAATTTCATATCAGTG ATTTTGGTACTAAAT TERM 1426 1310591 - 1310560 - R 100 -14 -4.37554 | opp_overlap 1310558 1310557 1310560 AAATTGAAATATAAA CTGATATGAAACTG CGAA CAATTTCATATCAG TGATTTTGGTACTAA TERM 1427 1310560 - 1310591 + r 83 -11.8 -3.14962 | opp_overlap 1310560, overlap 1310558 1310557 AAATTGAAATATAAA CTGATATGAAACTG CGAA CAATTTCATATCAG TGATTTTGGTACTAA Shew185_1102 1311718 - 1310615 - | phosphoribosylaminoimidazole carboxylase ATPase subunit Shew185_1103 1312209 - 1311718 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 1428 1312431 - 1312412 - R 93 -8.6 -5.28176 | opp_overlap 1312412 TTGAGCCATAAAAAA GACCAATC CTGA GATTGGCC TTTGATTTAAGTTAG Shew185_1104 1314242 - 1312479 - | putative sulfate transporter YchM TERM 1429 1314107 - 1314076 - G 78 -11.6 -3.04461 | TATTGAGGCGCAACA CCACTGGCAATGGC TAAT GCCATCGCTAATGG AATTGCAATAATACC Shew185_1105 1314430 - 1316358 + | von Willebrand factor type A Shew185_1106 1316404 - 1317009 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1430 1317707 - 1317694 - g 73 -4.5 -4.74103 | overlap 1317701 1317703 1317706 GCTCGAATTTAAAAA GCTAC AACA GCAGC TACATCAGCTTGCTA Shew185_1107 1317002 - 1317727 + | hypothetical protein Shew185_1108 1317963 - 1318499 + | hemerythrin HHE cation binding domain-containing protein TERM 1431 1318822 - 1318794 - T 88 -11.1 -4.06786 | opp_overlap 1318794 1318797 1318802, overlap 1318802 ATTCAATATCACAAA TAAAAAAAGCGCC TAA GGCGCTTTTCTTG TTCATGTTTAAGATG TERM 1432 1318794 - 1318822 + T 82 -11.1 -3.46285 | opp_overlap 1318794 1318802, overlap 1318797 1318802 ATTCAATATCACAAA TAAAAAAAGCGCC TAA GGCGCTTTTCTTG TTCATGTTTAAGATG TERM 1433 1318797 - 1318819 + T 86 -10.6 -3.8613 | opp_overlap 1318794 1318802, overlap 1318794 1318802 CAATATCACAAATAA AAAAAGCGCC TAA GGCGCTTTTC TTGTTCATGTTTAAG TERM 1434 1318814 - 1318802 - T 100 -10.5 -6.02919 | opp_overlap 1318797 1318794 1318802, overlap 1318794 TCACAAATAAAAAAA GCGCC TAA GGCGC TTTTCTTGTTCATGT TERM 1435 1318802 - 1318814 + T 93 -10.5 -4.93661 | opp_overlap 1318802 1318794, overlap 1318797 1318794 TCACAAATAAAAAAA GCGCC TAA GGCGC TTTTCTTGTTCATGT Shew185_1109 1319049 - 1318864 - | hypothetical protein TERM 1436 1319260 - 1319233 - R 85 -11.4 -3.40401 | opp_overlap 1319233 1319239, overlap 1319239 ATAAAAGGATAAAAT TAAAAAGCCAGC AATT GCTGGCTTTTTG TTCGATTAGATTTTG TERM 1437 1319233 - 1319260 + r 93 -13.6 -3.2352 | opp_overlap 1319233 1319239, overlap 1319239 ATAAAAGGATAAAAT TAAAAAGCCAGC AATT GCTGGCTTTTTG TTCGATTAGATTTTG TERM 1438 1319254 - 1319239 - R 93 -10.4 -5.1417 | opp_overlap 1319239 1319233, overlap 1319233 GGATAAAATTAAAAA GCCAGC AATT GCTGGC TTTTTGTTCGATTAG TERM 1439 1319239 - 1319254 + r 93 -10.4 -5.13741 | opp_overlap 1319233 1319239, overlap 1319233 GGATAAAATTAAAAA GCCAGC AATT GCTGGC TTTTTGTTCGATTAG Shew185_1110 1320903 - 1319266 - | glucose-6-phosphate isomerase TERM 1440 1320806 - 1320847 + g 81 -5.7 -4.85129 | opp_overlap 1320806 1320807 1320830, overlap 1320807 GACATTTTATTGAAA CGTGCCGCGTCAGTGGCAA ACAA TTCCCGCATATGCGGCACA TTTTTACTGTGTGCT TERM 1441 1320807 - 1320846 + g 71 -9.2 -3.49993 | opp_overlap 1320807 1320806 1320830, overlap 1320806 ACATTTTATTGAAAC GTGCCGCGTCAGTGGCAA ACAA TTCCCGCATATGCGGCAC ATTTTTACTGTGTGC Shew185_1111 1321879 - 1320923 - | transaldolase B TERM 1442 1321080 - 1321096 + g 79 -10.9 -3.5882 | TCAGCTGCGACAGTG CTGGTTG CTG CAACCAG TTTAGGAGTAATGTC TERM 1443 1322113 - 1322084 - R 100 -12.3 -4.8667 | opp_overlap 1322090, overlap 1322090 TATACCCCATAAAAA CAAAAAGTCGCTG CAAG CAGCGACTTTTTT ACGTCAGTAAGTAAT TERM 1444 1322090 - 1322107 + r 95 -11.3 -5.09895 | opp_overlap 1322084 1322090 CCATAAAAACAAAAA GTCGCTG CAAG CAGCGAC TTTTTTACGTCAGTA TERM 1445 1322107 - 1322090 - R 100 -11.3 -5.69262 | opp_overlap 1322090, overlap 1322084 CCATAAAAACAAAAA GTCGCTG CAAG CAGCGAC TTTTTTACGTCAGTA Shew185_1112 1323239 - 1322130 - | OmpA/MotB domain-containing protein TERM 1446 1322648 - 1322672 + g 78 -10.7 -3.28924 | opp_overlap 1322621 1322622 CTGGTGCCGCTGCAA CTGTGTTACCG AAG CGGTAGCTCAG TTCTAAGCCCCAGTA TERM 1447 1323444 - 1323427 - R 88 -7.7 -5.15969 | opp_overlap 1323427 TTTTAACGTAAAAAA GGCACTC CGAG GAATGCC TTTAAAATGAACTAT Shew185_1113 1325847 - 1323481 - | putative phosphoketolase TERM 1448 1325744 - 1325758 + g 70 -2.1 -4.88918 | GTATGTGCAAGTGGA CGTTT ATGTA AGACG TTTTGTTTGAGATAA TERM 1449 1326222 - 1326254 + H 80 -10 -3.72576 | opp_overlap 1326249 ATTCACCACAGATGT TGTACCTCTAATTG CCATT CAATTAGAGGAGCA TTTGCTACGGGAAGA TERM 1450 1327332 - 1327343 + G 70 -2.2 -4.9645 | GGGGTGGTGCGTTTA TTGC GGTG GCGA TTTTCTTATTCTGCT Shew185_1114 1326281 - 1327723 + | amino acid carrier protein TERM 1451 1327775 - 1327793 + F 100 -7.4 -5.82172 | opp_overlap 1327773 1327775 TCGTAATCGAAAAGA CCACGC CGTTAAA GCGTGG TTTTTTTATGTTCGT TERM 1452 1327793 - 1327775 - f 70 -8.1 -3.7398 | opp_overlap 1327775, overlap 1327773 TCGTAATCGAAAAGA CCACGCC GTTAA AGCGTGG TTTTTTTATGTTCGT Shew185_1115 1327853 - 1328626 + | hypothetical protein TERM 1453 1328646 - 1328683 + T 88 -8.8 -4.72127 | gap 2, opp_overlap 1328653 1328657 1328660, overlap 1328651 1328653 ATATCGATAAGATGT TAATTGAGAGAGAACAGC TAAT GCTGTTCTCTCT--ATTA TTTTATCTATTATCT TERM 1454 1328651 - 1328680 + T 100 -13.7 -4.43832 | opp_overlap 1328653 1328657 1328660, overlap 1328646 1328653 GATAAGATGTTAATT GAGAGAGAACAGC TAAT GCTGTTCTCTCTA TTATTTTATCTATTA TERM 1455 1328678 - 1328653 - T 100 -16.3 -2.55 | opp_overlap 1328651 1328646 1328653, overlap 1328657 1328660 TAAGATGTTAATTGA GAGAGAACAGC TAAT GCTGTTCTCTC TATTATTTTATCTAT TERM 1456 1328653 - 1328678 + T 100 -16.3 -3.79765 | opp_overlap 1328653 1328657 1328660, overlap 1328651 1328646 TAAGATGTTAATTGA GAGAGAACAGC TAAT GCTGTTCTCTC TATTATTTTATCTAT TERM 1457 1328674 - 1328657 - T 72 -9.9 -2.95091 | opp_overlap 1328653 1328651 1328646, overlap 1328653 1328660 ATGTTAATTGAGAGA GAACAGC TAAT GCTGTTC TCTCTATTATTTTAT Shew185_1116 1330110 - 1328704 - | peptidase M28 Shew185_1117 1330247 - 1330543 + | regulatory protein ArsR TERM 1458 1330560 - 1330589 + T 84 -12.3 -3.0549 | opp_overlap 1330560 1330568, overlap 1330560 1330568 AGTGTTTTTCAGATA TAAAAAAACCGGC AATT GCCGGTTTTTTTC ATTTGCTATTTTATA TERM 1459 1330589 - 1330560 - T 83 -12.3 -2.87211 | opp_overlap 1330560 1330560 1330568, overlap 1330568 AGTGTTTTTCAGATA TAAAAAAACCGGC AATT GCCGGTTTTTTTC ATTTGCTATTTTATA TERM 1460 1330560 - 1330590 + T 88 -10.7 -4.10958 | gap 1, opp_overlap 1330560 1330568, overlap 1330560 1330568 AGTGTTTTTCAGATA T-AAAAAAACCGGC AATT GCCGGTTTTTTTCA TTTGCTATTTTATAG TERM 1461 1330581 - 1330568 - T 100 -9.5 -5.76633 | opp_overlap 1330560 1330560 1330568, overlap 1330560 TCAGATATAAAAAAA CCGGC AATT GCCGG TTTTTTTCATTTGCT TERM 1462 1330568 - 1330581 + T 100 -9.5 -5.73563 | opp_overlap 1330568 1330560, overlap 1330560 1330560 TCAGATATAAAAAAA CCGGC AATT GCCGG TTTTTTTCATTTGCT Shew185_1118 1330873 - 1330607 - | 30S ribosomal protein S20 TERM 1463 1330742 - 1330771 + g 82 -5.1 -5.08169 | gap 1 TTCTGCTGCTGTTTT GTGATCGCCTGC TTTAATT GCAG-CGATTAC TTTTTTAACGTATGT TERM 1464 1332504 - 1332524 + G 71 -9 -3.48419 | opp_overlap 1332494, overlap 1332497 CTAAAGCCGTGGTCT CTACCGCC TTGAT GGTGGTAG TCTTGTATTACTTTT Shew185_1119 1331126 - 1332685 + | integral membrane protein MviN Shew185_1120 1332751 - 1333686 + | riboflavin biosynthesis protein RibF Shew185_1121 1333719 - 1336541 + | isoleucyl-tRNA synthetase TERM 1465 1336915 - 1336927 + G 90 -2.7 -5.78622 | TGCACGGTTTTGTGG TTGAT TTT ATCGA TTTTTTTTGGGCTAA TERM 1466 1336966 - 1336980 + G 91 -11.4 -4.24745 | opp_overlap 1336966 ATCCAGCTTTCAATA TCGCCG ATT CGGCGA TTTGTATTGGTGCTG TERM 1467 1336980 - 1336966 - g 78 -11.4 -3.03243 | opp_overlap 1336966 ATCCAGCTTTCAATA TCGCCG ATT CGGCGA TTTGTATTGGTGCTG Shew185_1122 1336551 - 1337066 + | lipoprotein signal peptidase Shew185_1123 1337063 - 1337485 + | peptidylprolyl isomerase, FKBP-type TERM 1468 1337525 - 1337542 + G 70 -2.5 -4.84761 | overlap 1337526 1337528 1337532 1337534 AAGTTTGAATATTAT GCTCGCG AACC CGCGTGG TTTTTGTGCGGGTGT TERM 1469 1337666 - 1337676 + G 73 -4.6 -4.83169 | opp_overlap 1337666 GCAGAATCTGAAGGA TCGC GGT GCGG TTTTTGTCGAAGAGT TERM 1470 1338087 - 1338064 - g 85 -5.2 -5.24129 | CCGCGTTACAAAAAA GGTTTCCTTC AATT GAAGGACCCC GCAAAGACGATATTT Shew185_1124 1337487 - 1338443 + | hydroxymethylbutenyl pyrophosphate reductase TERM 1471 1338468 - 1338496 + F 91 -13.4 -3.08173 | opp_overlap 1338475, overlap 1338475 ATGTTACGTTATTTA TAAAAAAGAGGC GATAA GCCTCTTTTTTA TTGCCTCAAATTCAT TERM 1472 1338475 - 1338489 + F 93 -7.1 -5.4833 | opp_overlap 1338475, overlap 1338468 GTTATTTATAAAAAA GAGGC GATAA GCCTC TTTTTTATTGCCTCA TERM 1473 1338489 - 1338475 - f 90 -7.1 -5.28176 | opp_overlap 1338475 1338468 GTTATTTATAAAAAA GAGGC GATAA GCCTC TTTTTTATTGCCTCA Shew185_1125 1338653 - 1339216 + | type IV pilus modification protein PilV TERM 1474 1339676 - 1339700 + G 70 -2.1 -4.96848 | GGTTAGTAGGGCCAC CGGTCACTA ATCCAGA TGGTGAACG TTTTTATATGGCAGC Shew185_1126 1339228 - 1340196 + | type IV pilus assembly protein PilW Shew185_1127 1340209 - 1340670 + | type IV pilus assembly protein PilX TERM 1475 1342051 - 1342090 + G 78 -7.8 -4.45168 | gap 1, overlap 1342033 1342050 AAGGTGCTGAAGATG CCGCC-CCTTTACTTGCTG AAA CTGCAAAAAGAGGTGGCGG TTTATATTTTGCGGC TERM 1476 1343052 - 1343065 + G 77 -6.7 -4.64766 | opp_overlap 1343051 ATGTGGTCGATTAAT CCTTC AACC GAAGG TTTTTCAGATCTCGG Shew185_1128 1340673 - 1344182 + | type IV pilin biogenesis protein, putative Shew185_1129 1344194 - 1344586 + | type IV pilus biogenesis protein PilE Shew185_1130 1344583 - 1344888 + | hypothetical protein Shew185_1131 1345474 - 1344980 - | type IV pilus biogenesis protein, putative Shew185_1132 1346134 - 1345622 - | type IV pilus biogenesis protein, putative TERM 1477 1346209 - 1346226 + H 91 -6.3 -5.51165 | TAAGTATAAAGTCTG GCGCTAT AGTT ATAGTGC TTTTTTTAGACTTTT Shew185_1133 1346376 - 1346714 + | nitrogen regulatory protein P-II TERM 1478 1346737 - 1346750 + F 100 -9.5 -5.4833 | opp_overlap 1346715 1346737 TAGAACGATTCTAAA GGGCC TAGT GGCCC TTTTTTGTTGGCTAA TERM 1479 1346750 - 1346737 - f 79 -9.5 -3.64609 | opp_overlap 1346737, overlap 1346715 TAGAACGATTCTAAA GGGCC TAGT GGCCC TTTTTTGTTGGCTAA Shew185_1134 1346901 - 1348190 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1480 1348233 - 1348216 - T 93 -9.9 -5.05782 | opp_overlap 1348216 ATGTAGGGCAAAAAA GAGAGCA AATA TGCTCTC TTTTTTATTGTTTAG TERM 1481 1348216 - 1348233 + T 100 -9.9 -5.72254 | opp_overlap 1348216 ATGTAGGGCAAAAAA GAGAGCA AATA TGCTCTC TTTTTTATTGTTTAG Shew185_1135 1349254 - 1348238 - | periplasmic binding protein/LacI transcriptional regulator TERM 1482 1349951 - 1349931 - g 100 -11.2 -4.83169 | opp_overlap 1349931 ATTCCCTGATAAAAA CGTTGCAG AATCG CTGCAACG TATTCCAGGTGTCAC TERM 1483 1349931 - 1349951 + G 74 -11.2 -3.05343 | opp_overlap 1349931 ATTCCCTGATAAAAA CGTTGCAG AATCG CTGCAACG TATTCCAGGTGTCAC TERM 1484 1351012 - 1350998 - g 71 -4.2 -4.68103 | GTAACTTTAATAAAA CACCCA AAA CGGATG ATGAAACTTATATTC TERM 1485 1351438 - 1351427 - g 75 -5.8 -4.65916 | opp_overlap 1351426 TTGATGGCAAGAAAA CCGA TTCT TCGG CTAATTATGGGGAAT Shew185_1136 1349641 - 1352319 + | TonB-dependent receptor TERM 1486 1352343 - 1352370 + F 82 -12.2 -2.93207 | opp_overlap 1352343 1352350, overlap 1352350 TAACTCATGTATAAA TGAAAAAGGGAG CTTG CTCCCTTTTTTA TATCTCAATAATATT TERM 1487 1352370 - 1352343 - f 84 -10 -3.93583 | opp_overlap 1352343 1352350, overlap 1352350 TAACTCATGTATAAA TGAAAAAGGGAG CTTG CTCCCTTTTTTA TATCTCAATAATATT TERM 1488 1352363 - 1352350 - f 88 -8.1 -5.04601 | opp_overlap 1352343 1352350, overlap 1352343 TGTATAAATGAAAAA GGGAG CTTG CTCCC TTTTTTATATCTCAA TERM 1489 1352350 - 1352363 + F 93 -8.1 -5.4251 | opp_overlap 1352350 1352343, overlap 1352343 TGTATAAATGAAAAA GGGAG CTTG CTCCC TTTTTTATATCTCAA Shew185_1137 1352415 - 1353119 + | SapC family protein TERM 1490 1354399 - 1354384 - g 77 -2.6 -5.18726 | GGTTGATAATAAAAA TGAAAT AAGT ATTCCA GACTCATTAAAAGAA TERM 1491 1354462 - 1354474 + G 73 -4.9 -4.81249 | TGCCTATGACTTTAC TTCTA CGC TAGAA TTTTTCAATTTAGAA Shew185_1138 1353140 - 1354681 + | tryptophan halogenase TERM 1492 1354704 - 1354726 + T 100 -13.6 -4.68601 | opp_overlap 1354710 ATTAAACGGCATGTA GAGCAAGATT GTT AATCTTGCTC TTTATTGTTTTAAAT Shew185_1139 1356262 - 1354736 - | tryptophan halogenase TERM 1493 1356167 - 1356145 - G 85 -12.2 -3.30124 | opp_overlap 1356142 1356139 CTTTACTTTCGATAA GTCTAATATC AAT GATATTAGAC GAATGGTTATATAAC Shew185_1140 1357194 - 1356277 - | hypothetical protein TERM 1494 1357346 - 1357332 - H 76 -3.6 -5.29782 | TATATTCATAAAAAA TAACAA TAA TTGTCA AAAAAATGTAGAAAT TERM 1495 1357543 - 1357572 + H 100 -14.3 -5.46629 | opp_overlap 1357536, overlap 1357544 CCCAGAAACTAGCGT GGGCTGGGTACTG TAAG CAGTGCCCAGCCA TTTTTTTAGGGTGTT TERM 1496 1357544 - 1357571 + H 100 -17.8 -3.86351 | opp_overlap 1357536, overlap 1357543 CCAGAAACTAGCGTG GGCTGGGTACTG TAAG CAGTGCCCAGCC ATTTTTTTAGGGTGT TERM 1497 1357735 - 1357757 + G 81 -7.8 -4.56597 | overlap 1357718 1357714 CGTCATTGCGACGGG CATGACGAGT GTC ATTCGTTATG TTTTTACACGAACGA Shew185_1141 1357691 - 1358770 + | hypothetical protein Shew185_1142 1358770 - 1360257 + | methyl-accepting chemotaxis sensory transducer TERM 1498 1362550 - 1362526 - g 71 -6.3 -4.24204 | overlap 1362529 GACCGATATTCAAAA TCAGCCGTTCG AAG CGGACGACAGA ATAAAACTTGATGAG Shew185_1143 1360286 - 1363084 + | Beta-N-acetylhexosaminidase TERM 1499 1363101 - 1363128 + F 100 -14.4 -5.71295 | TCGATTTTTATATCT GGCTGTATTTTA AAGA TAAAATACAGCC TTTTTGTTTTTCTGT TERM 1500 1363284 - 1363269 - f 71 -6.8 -4.1023 | opp_overlap 1363269 AACGGCAAATAATAA GCAACG GTAG CGCTGC ATTGATAGGTGAAGA Shew185_1144 1363308 - 1364243 + | ATPase BadF/BadG/BcrA/BcrD type TERM 1501 1364584 - 1364607 + G 74 -3.1 -5.1167 | gap 1, overlap 1364592 TATTTTGGCGCAGGC GCGTATGGCA AAAAA TGCCG-GCGC TTTTTGTGTTGCCTT TERM 1502 1364706 - 1364696 - g 93 -8.2 -5.06414 | GCTGGTGAAGAAAAA GCGG TTG CCGC GACTAAGAGTTACCT TERM 1503 1364721 - 1364738 + G 71 -6.3 -4.14392 | gap 1 CGACTAAGAGTTACC TCGC-GAC CTT GTCAGCGA TTTTACAACTTGCCG Shew185_1145 1364261 - 1365259 + | glutamine--fructose-6-phosphate transaminase (isomerizing) TERM 1504 1365680 - 1365693 + G 73 -8.1 -4.07568 | opp_overlap 1365675 ATTGAAACTATCGGC CGTGC CCAT GCACG TTTTGGCACGACAGG Shew185_1146 1365449 - 1366585 + | N-acetylglucosamine-6-phosphate deacetylase TERM 1505 1366624 - 1366658 + F 100 -5.8 -5.88565 | gap 1, overlap 1366624 1366625 1366627 GGTGATTTTTAACAT CT-GGCCCTTGTCGT ATTTTG ATGACAGGGGCTAAG TTTTTTTATTGTACA TERM 1506 1366625 - 1366656 + F 72 -9.5 -3.05281 | overlap 1366624 1366624 1366627 GTGATTTTTAACATC TGGCCCTTGTCGT ATTTTG ATGACAGGGGCTA AGTTTTTTTATTGTA TERM 1507 1366627 - 1366654 + F 72 -9.9 -3.04947 | overlap 1366625 1366624 1366624 GATTTTTAACATCTG GCCCTTGTCGT ATTTTG ATGACAGGGGC TAAGTTTTTTTATTG Shew185_1147 1366765 - 1367919 + | hypothetical protein TERM 1508 1367970 - 1367946 - f 70 -9.9 -2.63479 | opp_overlap 1367946 AATAGCTTGAGATCA GCCGCACGCAC TCA GTGTCTGCGGC TTTTTTTACATTATT TERM 1509 1367946 - 1367970 + F 100 -12.1 -5.57054 | opp_overlap 1367946 AATAGCTTGAGATCA GCCGCACGCAC TCA GTGTCTGCGGC TTTTTTTACATTATT TERM 1510 1368072 - 1368083 + F 80 -4.4 -5.23765 | opp_overlap 1368072 GAGAATTTATTAAAT GACA GCGT TGTC TTTTTGTGTTATTTG Shew185_1148 1368248 - 1369546 + | glucose/galactose transporter TERM 1511 1369595 - 1369572 - T 81 -6.7 -4.77986 | opp_overlap 1369575, overlap 1369575 TTAAATAGCTAAAAA GAAGCCCTC GATGAT GAGGGCTTT TTTGTGTCTTAGTTT TERM 1512 1369575 - 1369592 + T 95 -9.1 -5.47431 | opp_overlap 1369572 1369575 AATAGCTAAAAAGAA GCCCTCG ATGA TGAGGGC TTTTTTGTGTCTTAG TERM 1513 1369592 - 1369575 - T 85 -8.4 -4.47118 | opp_overlap 1369575, overlap 1369572 AATAGCTAAAAAGAA GCCCTC GATGAT GAGGGC TTTTTTGTGTCTTAG Shew185_1149 1370371 - 1369649 - | hypothetical protein TERM 1514 1370508 - 1370523 + r 86 -7.6 -5.03314 | TCATGGCGAGTTATT GCTAAG ATAC CTTAGC TTTTTTGAGGCTAAC Shew185_1150 1370920 - 1370555 - | protein of unknown function DUF861 cupin_3 Shew185_1151 1372441 - 1370951 - | methylmalonate-semialdehyde dehydrogenase TERM 1515 1372459 - 1372474 + r 83 -11.8 -3.12327 | overlap 1372457 TTAACCTTTGATGTT CCCCGC CGCA GCGGGG TGTTAAATGTGAGAG Shew185_1152 1373875 - 1372511 - | beta alanine--pyruvate transaminase TERM 1516 1373086 - 1373099 + g 71 -3.1 -4.84363 | gap 1, opp_overlap 1373084 1373086, overlap 1373084 CTTCATCAAAAATCA GCA-GG ATG CCGTGC TTTTTAGTGATTTCA TERM 1517 1374058 - 1374029 - H 72 -8.7 -3.55563 | gap 1, opp_overlap 1374024 1374031, overlap 1374032 ATTTTATTGCTCAAA CAG-CGTAATCTGA AGC TCGGATTACGACTG TGATGATGTGTAGCA TERM 1518 1375029 - 1375010 - g 79 -10.6 -3.63627 | GCGCCAGATCTGAAA GCCGCTGC CGTT GCTGCGGC CGAAGCCATTGCCTT Shew185_1153 1374155 - 1375651 + | aldehyde dehydrogenase TERM 1519 1375748 - 1375722 - T 85 -8.8 -4.4261 | opp_overlap 1375722 CGCTCAATACTAAAA CCTCTTTTCATA TTA CATGGAAAGAGG TTTTTTATTTTTTAC TERM 1520 1375722 - 1375748 + T 100 -10.3 -6.04324 | opp_overlap 1375722 CGCTCAATACTAAAA CCTCTTTTCAT ATTAC ATGGAAAGAGG TTTTTTATTTTTTAC TERM 1521 1375937 - 1375974 + T 100 -15.9 -3.70571 | opp_overlap 1375942, overlap 1375938 ACATTTTGGACGCAC AGCAACAGTACTTTAAT TGGA ATTAAAGTACTGTTGCG TTTGAAATATTTATG TERM 1522 1375938 - 1375973 + T 100 -19.4 -2.8162 | opp_overlap 1375942, overlap 1375937 CATTTTGGACGCACA GCAACAGTACTTTAAT TGGA ATTAAAGTACTGTTGC GTTTGAAATATTTAT TERM 1523 1375969 - 1375942 - T 93 -13 -3.2794 | opp_overlap 1375938 1375937 TTGGACGCACAGCAA CAGTACTTTAAT TGGA ATTAAAGTACTG TTGCGTTTGAAATAT Shew185_1154 1376749 - 1376024 - | regulatory protein GntR HTH Shew185_1155 1377023 - 1378264 + | outer membrane porin Shew185_1156 1378415 - 1380151 + | feruloyl esterase TERM 1524 1380224 - 1380193 - f 85 -8.7 -4.34737 | overlap 1380194 TTACTAATTAATAAA TGGTCGTGGCCAA CAACAT TTTGCCACGACCT TAAAAGCTTACCAAC TERM 1525 1380223 - 1380194 - f 83 -12.2 -3.20119 | overlap 1380193 TACTAATTAATAAAT GGTCGTGGCCAA CAACAT TTTGCCACGACC TTAAAAGCTTACCAA TERM 1526 1380418 - 1380436 + F 71 -7.4 -3.85184 | overlap 1380419 1380421 CTATCTACTTTTATT GCAGGTGA TTT TCACCTGA TTTGAGTGTTTTAGA TERM 1527 1380419 - 1380435 + F 77 -10.9 -2.90387 | overlap 1380418 1380421 TATCTACTTTTATTG CAGGTGA TTT TCACCTG ATTTGAGTGTTTTAG Shew185_1157 1381081 - 1382751 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Shew185_1158 1382820 - 1383164 + | hypothetical protein TERM 1528 1383201 - 1383216 + F 100 -5.4 -5.8187 | opp_overlap 1383194 1383193 1383201, overlap 1383193 TATATAACGAAAAAA CCACTT TCAA AGGTGG TTTTTTTATTGGATA TERM 1529 1383216 - 1383201 - f 76 -3.2 -5.35354 | opp_overlap 1383201 1383193, overlap 1383194 1383193 TATATAACGAAAAAA CCACTT TCAA AGGTGG TTTTTTTATTGGATA Shew185_1159 1383587 - 1384000 + | rare lipoprotein A TERM 1530 1384756 - 1384771 + G 71 -4.6 -4.57073 | overlap 1384757 CGCGATTGTCGATGC CCGTGG TGCG CCACGC TTTTTAGGCCAAGTG Shew185_1160 1384214 - 1385071 + | rhodanese domain-containing protein Shew185_1161 1385171 - 1385683 + | hypothetical protein TERM 1531 1385825 - 1385872 + T 73 -10.1 -2.90615 | gap 1, opp_overlap 1385831, overlap 1385828 1385831 AATGGCTCGCGCATA TGAC-AATGATGCCCATCTGAT TGTTT ATCCGATGGGCATCATGCGTTA TGGTTTAAAACCAGT TERM 1532 1385828 - 1385869 + T 77 -9.6 -3.60151 | gap 1, opp_overlap 1385831, overlap 1385825 1385831 GGCTCGCGCATATGA C-AATGATGCCCATCTGAT TGTTT ATCCGATGGGCATCATGCG TTATGGTTTAAAACC TERM 1533 1385831 - 1385865 + T 100 -15.9 -2.64805 | opp_overlap 1385831, overlap 1385828 1385825 TCGCGCATATGACAA TGATGCCCATCTGAT TGTTT ATCCGATGGGCATCA TGCGTTATGGTTTAA TERM 1534 1385865 - 1385831 - T 100 -15.9 -3.46602 | opp_overlap 1385828 1385825 1385831 TCGCGCATATGACAA TGATGCCCATCTGAT TGTTT ATCCGATGGGCATCA TGCGTTATGGTTTAA Shew185_1162 1387247 - 1385940 - | FAD dependent oxidoreductase Shew185_1163 1387484 - 1388032 + | cupin 2 domain-containing protein Shew185_1164 1388732 - 1389493 + | peptidase C26 TERM 1535 1389632 - 1389619 - g 71 -3.8 -4.72272 | overlap 1389621 TTTCTCGATGAAAAA GGCA TGCGTT TGCC TGAAAGTGTGTTGTT TERM 1536 1389698 - 1389716 + G 71 -4.6 -4.64844 | TTTACTACAGCTTGC TCGATG CTGCCGA CATCGA TTTTGTCTGTGTACC TERM 1537 1390544 - 1390533 - g 73 -7.2 -4.18018 | CCGTCGTATCGAAAA CCGG ATTC CCGG CGCCGATGCTAACTG Shew185_1165 1389496 - 1390851 + | glutamate--putrescine ligase TERM 1538 1390880 - 1390921 + F 85 -9 -4.19506 | gap 2 AGTGCACTAGTTGTG TTACCG-CGTTAACC-CAGA CAAA TCTAAGGTTAACGTCGGTAA TTTTAAGATTGAGCT Shew185_1166 1391453 - 1392553 + | extracellular solute-binding protein TERM 1539 1392561 - 1392581 + F 100 -16.9 -2.52795 | opp_overlap 1392561 GACAATAGTCGATAA GGGGCAAGC CTA GCTTGCCCC TAGCTTGGCAGACTT TERM 1540 1392581 - 1392561 - f 100 -16.9 -3.37474 | opp_overlap 1392561 GACAATAGTCGATAA GGGGCAAGC CTA GCTTGCCCC TAGCTTGGCAGACTT TERM 1541 1393623 - 1393613 - g 73 -2.4 -5.0916 | CGTCGAAGACAAAAA CGTG TGG CTCG CTGTGCGTCCTGAAA Shew185_1167 1392732 - 1393868 + | spermidine/putrescine ABC transporter ATPase subunit Shew185_1168 1393865 - 1394770 + | binding-protein-dependent transport systems inner membrane component Shew185_1169 1394767 - 1395582 + | ornithine carbamoyltransferase TERM 1542 1395597 - 1395625 + F 100 -19.7 -3.8591 | GTTTGCTTAATCTTG GGGTGGCTTTGGT ATC GCCAAAGCCACCC TTGTTAATTGTCACC TERM 1543 1396262 - 1396248 - g 77 -5 -4.90266 | GCGATGAACGAAAAA CAAATG GGT CATCTG CGCCATCAAAAGCAA TERM 1544 1396480 - 1396466 - g 70 -10 -3.17206 | overlap 1396464 TAAGATTTATGAAGA CTCAGC AGT GCTGAG TGTCGACGAAGGCGA Shew185_1170 1395846 - 1397132 + | FAD dependent oxidoreductase TERM 1545 1397922 - 1397908 - g 75 -11.4 -2.73701 | opp_overlap 1397908, overlap 1397907 CGGTATTAAATTAAT GGCGCA ATG TGCGCC TACCTTAAAAAAACT TERM 1546 1397908 - 1397922 + G 75 -11.4 -2.52543 | opp_overlap 1397908 1397907 CGGTATTAAATTAAT GGCGCA ATG TGCGCC TACCTTAAAAAAACT Shew185_1171 1397183 - 1398631 + | succinic semialdehyde dehydrogenase TERM 1547 1399635 - 1399623 - g 73 -3.3 -4.89477 | GTTTGAAGAAGAAAA GCTGT TAG ACCGC GCCAATACCATAGGT Shew185_1172 1398664 - 1399941 + | 4-aminobutyrate aminotransferase TERM 1548 1400012 - 1399987 - T 72 -10.5 -2.69649 | opp_overlap 1399992, overlap 1399992 ACAGTTTTACATAAT GAAAATCCCGC TTCG GCGGGATTTTT TATGGAAGTGGCGAT TERM 1549 1399992 - 1400007 + T 100 -10.4 -5.252 | opp_overlap 1399987 1399992 TTTACATAATGAAAA TCCCGC TTCG GCGGGA TTTTTTATGGAAGTG TERM 1550 1400007 - 1399992 - T 91 -10.4 -4.53034 | opp_overlap 1399992, overlap 1399987 TTTACATAATGAAAA TCCCGC TTCG GCGGGA TTTTTTATGGAAGTG TERM 1551 1400033 - 1400044 + T 75 -5.8 -4.72986 | overlap 1400041 AAGTGGCGATTGTTT TGGC GTTT GCCA TTTTTACTGCCAATG Shew185_1173 1401097 - 1400090 - | luciferase family protein TERM 1552 1401587 - 1401563 - R 100 -16.5 -5.66684 | opp_overlap 1401563 TAAGTGATAAAAAAA CTGCCGACAGC AGG GCTATCGGCAG TTGATGTTATGCAAT TERM 1553 1401563 - 1401587 + r 100 -14.3 -3.42013 | opp_overlap 1401563 TAAGTGATAAAAAAA CTGCCGACAGC AGG GCTATCGGCAG TTGATGTTATGCAAT TERM 1554 1401622 - 1401641 + r 89 -10 -4.21275 | AAATCGCTATTGTCA GTCGAGCA TTAT TGCTCGGC TTTTACATCCCTTAG Shew185_1174 1403195 - 1401630 - | amino acid/peptide transporter TERM 1555 1403208 - 1403218 + r 73 -5.4 -4.50358 | CATATCGCTTGCTTC CAAC ATT GTTG TTTTAATATTTGAGT Shew185_1175 1404210 - 1403437 - | hypothetical protein TERM 1556 1404040 - 1404019 - G 74 -6.6 -4.38712 | opp_overlap 1404024 GTTATCGGCAGAAAA GTGCGCTT GGGTGT AAGCACAC TCACGTATTGGCAAC Shew185_1176 1405731 - 1404220 - | tryptophan halogenase TERM 1557 1404762 - 1404742 - G 100 -12.5 -4.57073 | GAGTGGCTCTAAAAA GCCGCCGGA CAG CCCGACGGC AACACAGTTTTTATG Shew185_1177 1406771 - 1405752 - | transcription factor jumonji domain-containing protein Shew185_1178 1407507 - 1406785 - | SapC family protein Shew185_1179 1409197 - 1407566 - | tryptophan halogenase TERM 1558 1408956 - 1408974 + g 73 -5.2 -4.54449 | opp_overlap 1408956, overlap 1408947 CATTGGCGGATAAAT TCGGTTTC GCT GATGCCGA TTTTATCTAAGGTGT TERM 1559 1409228 - 1409240 + r 83 -3.5 -5.68023 | TTTTATTGTTGTTTA TAAAA GGC TTTTA TTTTTTTCGTTATCA TERM 1560 1409401 - 1409379 - R 71 -4.2 -4.84359 | TCATCCTGATAAAAA TGAGGCAT CTATGGC ATACCTCA TACGACCTTAGGGTA Shew185_1180 1412441 - 1409445 - | TonB-dependent receptor plug TERM 1561 1410554 - 1410574 + g 77 -3.9 -5.15634 | opp_overlap 1410554 CATAGGAGGAAACAA CAGAAGTCG ATT CAACATCTG TTTTTTCGTAGCGTA TERM 1562 1411985 - 1411996 + g 76 -7.2 -4.42788 | CGCCCGTTGGATTTT CCGC CTTA GCGG TTTTCTCCACTTCAA Shew185_1181 1414133 - 1413129 - | alanine racemase TERM 1563 1414007 - 1413978 - G 72 -10.8 -2.73364 | GTTGGACGCTAATGA TTGGGCTATCGC ATTGGG GCGATAGTCCAA CTGAGCCATAGCGTC Shew185_1182 1415517 - 1414192 - | sugar (glycoside-Pentoside-hexuronide) transporter TERM 1564 1414607 - 1414597 - G 81 -3.2 -5.37345 | TTTAAGGACAAAAAA GTGC AGT ACAC ACAGGGTCGCGGCTA TERM 1565 1415482 - 1415495 + g 88 -2.3 -5.86976 | GCTGGCAGTGTCGCC AAGCC CATA GGCTA TTTTTTCTTTTATGC Shew185_1183 1416883 - 1415528 - | Beta-glucosidase TERM 1566 1416026 - 1416015 - G 74 -3 -5.055 | TTAACCCCTAAAAAA TCAA TTGG TTGA CTGATAAGCTCAAGG TERM 1567 1417863 - 1417850 - H 76 -4.5 -5.08824 | overlap 1417852 TTTTTAGGTAAAAAA CTGCC TGCG AGCAG TGCTAAAGTGCTGGG TERM 1568 1417948 - 1417959 + H 73 -2.2 -5.29385 | gap 1, overlap 1417940 1417948 TGTGGGGGCCGAAGT C-GCC ATT GGCAG TTTTTTGATTAGCTT Shew185_1185 1418530 - 1421190 + | glycoside hydrolase family 3 protein TERM 1569 1421204 - 1421237 + F 73 -8.7 -3.64441 | opp_overlap 1421199, overlap 1421200 AATGTAAAATCCCAA GGCGCAGTTGGCTCG TTTA CATGACGACTGCGCC TTCATTGTTTGCTGT TERM 1570 1422205 - 1422224 + G 71 -8.6 -3.63341 | gap 1 GCTATATGTGGTTGG CCGTGAGTG TCA CACTC-CGG TTGTTAAAAACTGTT Shew185_1186 1421393 - 1422289 + | fructokinase TERM 1571 1422326 - 1422353 + F 100 -10.7 -5.81622 | opp_overlap 1422326 GTGTTTGATATTTAA GGCCGAATTCA TTTATT TGAATTTGGCC TTTTTTTGATTTTGT Shew185_1187 1422520 - 1424640 + | methyl-accepting chemotaxis sensory transducer TERM 1572 1424679 - 1424725 + T 71 -3.9 -4.84359 | gap 1 CGTATTGATTTTAAA TAGGCTCTTTGATT-GTGTT GCTGGTTA AGCACTGAACAAAGGGCCTA TTTTTATGGCAATGG TERM 1573 1424864 - 1424847 - T 100 -9.9 -5.4251 | opp_overlap 1424847 TTTAGATACAAAAAA GCCCATT TTTC AATGGGC TTTTTTGTTGAATCG TERM 1574 1424847 - 1424864 + T 100 -9.9 -5.4833 | opp_overlap 1424847 TTTAGATACAAAAAA GCCCATT TTTC AATGGGC TTTTTTGTTGAATCG TERM 1575 1425175 - 1425158 - T 100 -12.7 -5.12068 | opp_overlap 1425152 1425150 GAGAGGCAATAAAAA GCCCTGC ATAG GCAGGGC TTCAAATCTTACTTA Shew185_1188 1427097 - 1425214 - | RNA polymerase, sigma 70 subunit, RpoD TERM 1576 1427112 - 1427081 - G 75 -10.3 -3.3506 | gap 2, overlap 1427084 GGGAAACTGTTACAA CGACGGACACTTAGC ATGA GCTAAGTG-CCG-CG CAAATCGTCAATTAT TERM 1577 1427110 - 1427084 - G 76 -11.7 -2.84015 | gap 1, overlap 1427081 AAACTGTTACAACGA CGGACACTTAGC ATGA GCTAAGTG-CCG CGCAAATCGTCAATT Shew185_1189 1428909 - 1427185 - | DNA primase TERM 1578 1428949 - 1428972 + r 85 -12.4 -3.16564 | opp_overlap 1428949, overlap 1428952 GCGAATTTAAACAAA CAAGCCGCGC ATAG GCACGGCTTG TTCATACAGTGAAAC TERM 1579 1428972 - 1428949 - R 100 -14.6 -4.50159 | opp_overlap 1428949 1428952 GCGAATTTAAACAAA CAAGCCGCGC ATAG GCACGGCTTG TTCATACAGTGAAAC TERM 1580 1428952 - 1428969 + r 73 -8.3 -3.7282 | opp_overlap 1428949, overlap 1428949 AATTTAAACAAACAA GCCGCGC ATAG GCACGGC TTGTTCATACAGTGA Shew185_1190 1429436 - 1428993 - | GatB/Yqey domain-containing protein TERM 1581 1429453 - 1429467 + r 75 -7.8 -4.07568 | opp_overlap 1429453 TGAGATTAATATAAA CGTACG CGA CGTGCG TTTTCGCGAGAAAGC Shew185_1191 1429658 - 1429443 - | 30S ribosomal protein S21 Shew185_1192 1429874 - 1430890 + | metalloendopeptidase glycoprotease family TERM 1582 1430916 - 1430962 + T 95 -14 -3.38324 | opp_overlap 1430931, overlap 1430918 1430931 ATGCCGATGTATTGA TGCTGAAATAAAAAACTGCGCT TTT AGCGCAGTTTTTTATTGGGGTA ATTTTATTGGGCGTA TERM 1583 1430918 - 1430960 + T 95 -14.4 -3.25538 | opp_overlap 1430931, overlap 1430916 1430931 GCCGATGTATTGATG CTGAAATAAAAAACTGCGCT TTT AGCGCAGTTTTTTATTGGGG TAATTTTATTGGGCG TERM 1584 1430931 - 1430947 + T 100 -12.3 -5.46657 | opp_overlap 1430931, overlap 1430918 1430916 TGCTGAAATAAAAAA CTGCGCT TTT AGCGCAG TTTTTTATTGGGGTA TERM 1585 1430947 - 1430931 - T 100 -12.3 -5.63517 | opp_overlap 1430931 1430918 1430916 TGCTGAAATAAAAAA CTGCGCT TTT AGCGCAG TTTTTTATTGGGGTA Shew185_1193 1431597 - 1430986 - | putative glycerol-3-phosphate acyltransferase PlsY Shew185_1194 1431866 - 1432216 + | dihydroneopterin aldolase Shew185_1195 1432286 - 1432789 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1586 1433088 - 1433098 + G 81 -3.2 -5.50313 | overlap 1433076 TTATTCTGGCGACCT TGCC AGC GGTA TTTTTTGGTTTTCTG Shew185_1196 1432808 - 1433608 + | undecaprenyl pyrophosphate phosphatase TERM 1587 1433652 - 1433668 + F 100 -8 -5.61881 | opp_overlap 1433647 1433652 TAATAAATAATAGAA TCGGGT CATGT ACCCGA TTTTTGTTTTTGGAG TERM 1588 1433668 - 1433652 - f 73 -8 -3.96154 | opp_overlap 1433652, overlap 1433647 TAATAAATAATAGAA TCGGGT CATGT ACCCGA TTTTTGTTTTTGGAG TERM 1589 1434098 - 1434073 - g 74 -9.7 -3.60818 | overlap 1434064 CGAAAATCCGCTAAA CGTCCAGTACG TGGG CGTAGCGGACG CAGAAAATGCTATTT Shew185_1197 1433726 - 1434568 + | ribosomal RNA large subunit methyltransferase A, putative TERM 1590 1434876 - 1434895 + T 70 -8 -3.64822 | opp_overlap 1434876 GATAAACGAGAATGA CTTTTAAG AATA CTTAAAAG TTTAAATGAGAAGCT Shew185_1198 1435457 - 1435191 - | major outer membrane lipoprotein, putative Shew185_1199 1436941 - 1435691 - | polynucleotide adenylyltransferase/metal dependent phosphohydrolase TERM 1591 1436064 - 1436095 + g 80 -8.6 -4.37886 | overlap 1436065 GCAAGATCGCGGGTT TCGTTCGGCACTCG TAAA CGGGTGCAGAGCGC TTTTATCAGCGGTAA TERM 1592 1436065 - 1436094 + g 82 -12.1 -3.2241 | overlap 1436064 CAAGATCGCGGGTTT CGTTCGGCACTCG TAAA CGGGTGCAGAGCG CTTTTATCAGCGGTA TERM 1593 1436382 - 1436366 - G 100 -10.9 -4.60487 | CAGTACCTCGAAAAA GACCTCA GGG TGAGGTC CGCCTAAGCTTTTAT TERM 1594 1437080 - 1437094 + H 74 -5 -4.74504 | overlap 1437075 AACATTGGGACGCTT TAACGT GGG GCGTTA TTTTTAAATTAGGAT TERM 1595 1437443 - 1437457 + G 80 -2.8 -5.4505 | overlap 1437429 ACTCAAGCAGTTGAC CGAC CACTTGA GTCG TTTTTTATTGGACAA TERM 1596 1437969 - 1437985 + G 75 -5.8 -4.51363 | CCGACAACAACCGCT GCGACG TTATT TGTCGC TTTTGGTGTTTCCTA Shew185_1200 1437120 - 1438793 + | peptidoglycan binding domain-containing protein Shew185_1201 1438793 - 1439911 + | general secretion pathway protein B TERM 1597 1440000 - 1439975 - T 75 -10.5 -3.05535 | opp_overlap 1439981, overlap 1439981 CTAAAGAGTAGAAAT GAAAAAGGCGC CTAG GCGCCTTTTTT GATCTTAATGAATCT TERM 1598 1439994 - 1439981 - T 93 -9.5 -5.05505 | opp_overlap 1439981, overlap 1439975 AGTAGAAATGAAAAA GGCGC CTAG GCGCC TTTTTTGATCTTAAT TERM 1599 1439981 - 1439994 + T 100 -9.5 -5.28683 | opp_overlap 1439981 1439975 AGTAGAAATGAAAAA GGCGC CTAG GCGCC TTTTTTGATCTTAAT Shew185_1202 1441267 - 1440020 - | citrate transporter Shew185_1203 1441820 - 1442017 + | hypothetical protein TERM 1600 1442067 - 1442098 + T 100 -16 -4.62336 | opp_overlap 1442070, overlap 1442070 1442074 AATTAAATTTAATAA AAACAAAGGGACGC TATT GCGTCCCTTTGTTA TTTTTAAGGTGCAGT TERM 1601 1442095 - 1442070 - T 100 -17.7 -5.16151 | opp_overlap 1442070 1442067 1442074 TAAATTTAATAAAAA CAAAGGGACGC TATT GCGTCCCTTTG TTATTTTTAAGGTGC TERM 1602 1442070 - 1442095 + T 100 -17.7 -4.42748 | opp_overlap 1442070, overlap 1442067 1442074 TAAATTTAATAAAAA CAAAGGGACGC TATT GCGTCCCTTTG TTATTTTTAAGGTGC TERM 1603 1442074 - 1442091 + T 100 -12.7 -4.76802 | opp_overlap 1442070, overlap 1442070 1442067 TTTAATAAAAACAAA GGGACGC TATT GCGTCCC TTTGTTATTTTTAAG Shew185_1204 1443423 - 1442131 - | glutamate-1-semialdehyde-2,1-aminomutase Shew185_1205 1444469 - 1443450 - | aspartate carbamoyltransferase Shew185_1206 1446457 - 1444733 - | chloride channel core TERM 1604 1445274 - 1445261 - G 70 -9.5 -3.15861 | TAGCAGGGCGACTAA CGCCG CCAG CGGCG CGCTTAAGCACACGC TERM 1605 1446078 - 1446065 - G 73 -2.3 -5.0133 | opp_overlap 1446065, overlap 1446066 TAGTGCTTGAAAAAA TTGCC CTAC GGCAG ATTGTAGCGGAATTT Shew185_1207 1446532 - 1447335 + | hypothetical protein Shew185_1208 1447328 - 1447678 + | iron-sulfur cluster insertion protein ErpA TERM 1606 1447751 - 1447779 + T 78 -11.1 -3.07994 | opp_overlap 1447757, overlap 1447757 GTGTGAAGTGAGATC AAAAAAGCCGTCG TAA TGACGGCTTTTTG TTGGGTAAAATTCAG TERM 1607 1447757 - 1447773 + T 93 -10.1 -5.10461 | opp_overlap 1447757, overlap 1447751 AGTGAGATCAAAAAA GCCGTCG TAA TGACGGC TTTTTGTTGGGTAAA TERM 1608 1447773 - 1447757 - T 100 -9.4 -5.22312 | opp_overlap 1447757 1447751 AGTGAGATCAAAAAA GCCGTC GTAAT GACGGC TTTTTGTTGGGTAAA Shew185_1209 1448262 - 1447807 - | hypothetical protein TERM 1609 1448050 - 1448025 - G 70 -9.7 -3.23899 | TGCTAATCAAGCCAA GCTGCACGACT GTGT AGCCACGCAGC ATAATAAGCGCCGCC Shew185_1210 1448662 - 1448282 - | hypothetical protein TERM 1610 1448812 - 1448782 - R 93 -9.7 -4.91109 | opp_overlap 1448783 1448785 1448788, overlap 1448785 GCGGGATTAGAAAAA GAACAACAGCGCC AAGAG GGCGCTGTTGTGT TAGATCTTCGATGTT TERM 1611 1448783 - 1448811 + r 91 -13.2 -3.19789 | opp_overlap 1448782 1448785, overlap 1448785 1448788 CGGGATTAGAAAAAG AACAACAGCGCC AAGAG GGCGCTGTTGTG TTAGATCTTCGATGT TERM 1612 1448785 - 1448809 + r 100 -15.8 -3.1577 | opp_overlap 1448785 1448782, overlap 1448783 1448788 GGATTAGAAAAAGAA CAACAGCGCC AAGAG GGCGCTGTTG TGTTAGATCTTCGAT TERM 1613 1448809 - 1448785 - R 100 -15.8 -4.56153 | opp_overlap 1448783 1448785 1448788, overlap 1448782 GGATTAGAAAAAGAA CAACAGCGCC AAGAG GGCGCTGTTG TGTTAGATCTTCGAT TERM 1614 1448788 - 1448806 + r 89 -11.7 -3.71517 | opp_overlap 1448785 1448782, overlap 1448785 1448783 TTAGAAAAAGAACAA CAGCGCC AAGAG GGCGCTG TTGTGTTAGATCTTC Shew185_1211 1449522 - 1448827 - | aquaporin Z TERM 1615 1449920 - 1449894 - R 73 -9.5 -3.25204 | opp_overlap 1449894 1449883 1449898, overlap 1449890 1449895 1449898 TGAGGCGTAAATACA GCAAGAGCTTC ATGTA GAAGCTCTTGG TTAGGTTACCGCTTG TERM 1616 1449894 - 1449920 + r 73 -9.5 -3.18199 | opp_overlap 1449890 1449894 1449895 1449898, overlap 1449883 1449898 TGAGGCGTAAATACA GCAAGAGCTTC ATGTA GAAGCTCTTGG TTAGGTTACCGCTTG TERM 1617 1449919 - 1449895 - R 90 -13 -2.54801 | opp_overlap 1449894 1449883 1449898, overlap 1449894 1449890 1449898 GAGGCGTAAATACAG CAAGAGCTTC ATGTA GAAGCTCTTG GTTAGGTTACCGCTT TERM 1618 1449916 - 1449898 - R 72 -8.9 -3.42257 | opp_overlap 1449894 1449883 1449898, overlap 1449895 1449894 1449890 GCGTAAATACAGCAA GAGCTTC ATGTA GAAGCTC TTGGTTAGGTTACCG TERM 1619 1449898 - 1449916 + r 72 -8.9 -3.4052 | opp_overlap 1449898 1449895 1449894 1449890, overlap 1449894 1449883 GCGTAAATACAGCAA GAGCTTC ATGTA GAAGCTC TTGGTTAGGTTACCG Shew185_1212 1451063 - 1449954 - | anhydro-N-acetylmuramic acid kinase Shew185_1213 1452490 - 1451084 - | peptidase M23B TERM 1620 1451149 - 1451161 + g 100 -6.3 -5.54907 | ATTGCTGGCTGAGTG CATCA AAT TGATG TTTTTCTTTTCTCGC TERM 1621 1453493 - 1453482 - g 72 -5.8 -4.35116 | CACGTGACATTAAAA TCGC TTTG GCGA AGGAAATCATCACAC Shew185_1214 1452617 - 1453810 + | tyrosyl-tRNA synthetase TERM 1622 1453791 - 1453805 + T 72 -8.6 -3.58801 | GTAAACGCAAGTTTG CCAAAG TGA CTTTGG TTTAAGACATTGTCT TERM 1623 1453869 - 1453852 - T 100 -12.7 -5.13741 | opp_overlap 1453852 TTAATCGAACAAAAA GAGCGCC TTAG GGCGCTC TTTGTTTTTAAATCT TERM 1624 1453852 - 1453869 + T 100 -12.7 -4.89966 | opp_overlap 1453852 TTAATCGAACAAAAA GAGCGCC TTAG GGCGCTC TTTGTTTTTAAATCT Shew185_1215 1454329 - 1453901 - | hypothetical protein Shew185_1216 1454947 - 1454456 - | hypothetical protein Shew185_1217 1455575 - 1454949 - | hypothetical protein Shew185_1218 1455949 - 1455572 - | hypothetical protein Shew185_1219 1456995 - 1456006 - | cobalamin biosynthesis protein CbiB TERM 1625 1456953 - 1456939 - G 70 -2.1 -4.88129 | AAAAAGTACCAAAAA GCCTT CAAAC AAAGC GCCATCTATCTCGAC Shew185_1220 1457728 - 1457018 - | adenosylhomocysteine nucleosidase TERM 1626 1457550 - 1457572 + g 79 -10.6 -3.70902 | TTTTCGATGAGCAGT GTGGTTGCAA TGC TTGCGGCCAC TTTACCTATGCCAGA TERM 1627 1457892 - 1457871 - R 75 -2.9 -5.26875 | opp_overlap 1457864 GGGTTAACGAAAAAA GTGCGTACC CTAA GATGCACAC TTTTATCTATTTATT TERM 1628 1457998 - 1457969 - R 100 -12.3 -4.65032 | opp_overlap 1457961, overlap 1457961 CAAATCACAAACAAA TGGCTGGACTT GTTTGCCT AAGTCCAGCCA TTGCAGTGCTTATTA Shew185_1221 1459484 - 1458078 - | glutamate synthase subunit beta Shew185_1222 1463879 - 1459491 - | glutamate synthase subunit alpha TERM 1629 1461470 - 1461492 + g 81 -6.2 -4.87665 | overlap 1461472 GCGTGGCTATTGGAC GATTGTCGAC GAG GTCGGCGAAC TTTTTATAGGTCGCG TERM 1630 1463756 - 1463745 - G 77 -4.4 -5.01732 | opp_overlap 1463745, overlap 1463747 AATCGCTTCAAAAAA TTGC ACTG GCAA TTGCATTAATAAACC TERM 1631 1463787 - 1463817 + g 70 -9.7 -3.17763 | gap 2, opp_overlap 1463747 1463773 1463770 1463775 1463771, overlap 1463791 ACAGCCGTCGCCAGT GCGACCGTCGGAGGC AAT GCCACCG-CGGT-GC TTCATGCGATCTAGA TERM 1632 1463791 - 1463814 + g 71 -10.2 -2.78725 | gap 1, opp_overlap 1463773 1463770 1463775 1463771, overlap 1463787 CCGTCGCCAGTGCGA CCGTCGGAGGC AAT GCCACCG-CGG TGCTTCATGCGATCT TERM 1633 1464099 - 1464060 - H 70 -3.1 -4.99134 | opp_overlap 1464071, overlap 1464062 AGGTCAAACCAAAAA TTTGCATAAAACATG GGTATTAATT CATGTTTTATACACA AGCTATAATTGCTTT TERM 1634 1464420 - 1464432 + H 75 -2.7 -5.33331 | ACCTCTCGCTACCTT GTTTA CAC TAAGC TTTTTCTTCTATTTG Shew185_1223 1464527 - 1465456 + | putative radical SAM protein Shew185_1224 1465661 - 1466026 + | Hpt protein Shew185_1225 1466311 - 1467237 + | LysR family transcriptional regulator Shew185_1226 1468377 - 1467310 - | putative adenylate/guanylate cyclase Shew185_1227 1469171 - 1468500 - | DNA mismatch repair protein TERM 1635 1468564 - 1468554 - G 70 -2.4 -4.86731 | GGTCTTTAAATAAAA GCCC CTA GGGT TAGTCATTTTGAGGC TERM 1636 1468647 - 1468667 + g 71 -3.9 -4.70879 | overlap 1468648 ACGTAATTGCAGTAC TTCGCCGTG GCG TGCGGTGAG TTTTTCGACTTTGCC TERM 1637 1469721 - 1469690 - H 74 -8.9 -3.57462 | gap 1, opp_overlap 1469690 1469709, overlap 1469692 TACCTGAGTTTCAAA CAGAGATATCCACA GAAAA TGTGGATATCCC-G CATTTCATCCCCTAG TERM 1638 1469720 - 1469692 - H 87 -12.6 -3.36515 | opp_overlap 1469690 1469709, overlap 1469690 CCTGAGTTTCAAACA GAGATATCCACA GAAAA TGTGGATATCCC GCATTTCATCCCCTA Shew185_1228 1469861 - 1470385 + | dinucleoside polyphosphate hydrolase Shew185_1229 1470409 - 1472643 + | phosphoenolpyruvate-protein phosphotransferase PtsP TERM 1639 1473321 - 1473346 + G 75 -5.3 -4.74013 | overlap 1473343 GCGGGCTTTAATGCG CCCGAGTTGCC CTAC GGCACCTTAGG TTTTATCTATTTACC Shew185_1230 1472703 - 1473503 + | hypothetical protein Shew185_1231 1473546 - 1474355 + | prolipoprotein diacylglyceryl transferase TERM 1640 1475008 - 1474998 - g 71 -6.8 -4.23615 | opp_overlap 1474998 ACCATATGGAACAAA CTGC ATT GCAG TTAAGTCGTGAGCCA Shew185_1232 1474352 - 1475146 + | thymidylate synthase TERM 1641 1475168 - 1475184 + F 72 -9.4 -3.08798 | opp_overlap 1475166 1475168 TTTTTTCGACCAATA CCTCGG AATAA CCGAGG TGTTAGGTCGAAACT TERM 1642 1475184 - 1475168 - f 73 -9.4 -3.13403 | opp_overlap 1475168, overlap 1475166 TTTTTTCGACCAATA CCTCGG AATAA CCGAGG TGTTAGGTCGAAACT Shew185_1233 1475264 - 1476433 + | Na+/H+ antiporter NhaA Shew185_1234 1476436 - 1476822 + | hypothetical protein TERM 1643 1476876 - 1476849 - f 80 -10.6 -3.33583 | gap 1 ACAATAGGTTTATAA TCCCTC-TGCGCC TTG GGCGTATGAGGGA CGATTCACACTGGAT TERM 1644 1476977 - 1476949 - g 87 -6.6 -5.15167 | gap 1, opp_overlap 1476947 1476945 1476949 GATGATTAAGAAAAA GGGC-TCGGTTGC TAAG GCGGCCGAAGCCC TCTGTTTAACGCCGC TERM 1645 1476949 - 1476977 + G 76 -11 -3.24232 | gap 1, opp_overlap 1476949, overlap 1476947 1476945 GATGATTAAGAAAAA GGGC-TCGGTTGC TAAG GCGGCCGAAGCCC TCTGTTTAACGCCGC Shew185_1235 1476869 - 1477804 + | transcriptional activator NhaR Shew185_1236 1477899 - 1478138 + | hypothetical protein TERM 1646 1478160 - 1478182 + G 100 -16.4 -5.4433 | CGTAAAAGCCTCCTT CGACCAACGA CTC TCGTTGGTCG TTTTTATTTGTGTCT TERM 1647 1478399 - 1478409 + G 71 -4.6 -4.58308 | TATTAAAGCGAACTT GGGT GAC GCCC TTTGTTTGCTTGATG TERM 1648 1478568 - 1478528 - g 100 -14.3 -4.07568 | opp_overlap 1478533, overlap 1478533 TGCTGCGGGCTAAAA TAAAACAGACTAAACCTCA TAC CGAGATTTAGTCTGTTTTC AGCAAGCCAAATAAG TERM 1649 1478533 - 1478563 + G 87 -11.3 -4.07568 | opp_overlap 1478533 1478528 CGGGCTAAAATAAAA CAGACTAAACCTC ATACC GAGATTTAGTCTG TTTTCAGCAAGCCAA TERM 1650 1478563 - 1478533 - g 100 -14.2 -5.07652 | opp_overlap 1478533, overlap 1478528 CGGGCTAAAATAAAA CAGACTAAACCTCA TAC CGAGATTTAGTCTG TTTTCAGCAAGCCAA Shew185_1237 1478119 - 1478559 + | hypothetical protein TERM 1651 1478642 - 1478660 + T 73 -7.4 -4.07124 | CTGGTAATAAAATTG TTGGGCGC GGC GCGTCTAA TTTCTCTGGATGGTC Shew185_1238 1480232 - 1478619 - | L-aspartate oxidase Shew185_1239 1480422 - 1481000 + | RNA polymerase sigma factor RpoE TERM 1652 1480996 - 1480976 - f 85 -7.6 -4.91712 | gap 1, opp_overlap 1480975, overlap 1480977 1480978 GGCAATCGATAAAAA GCT-CCAGC CGTT GCTGGAAGC CTAAATTCTTATTTT Shew185_1240 1481042 - 1481668 + | anti sigma-E protein, RseA TERM 1653 1481821 - 1481838 + G 76 -8.4 -4.08485 | GATTATTCAACTTCA GGCCGA TCATAT TCGGCC TTTGGTTTACCTGCA Shew185_1241 1481681 - 1482613 + | sigma E regulatory protein, MucB/RseB TERM 1654 1482851 - 1482889 + G 100 -11.1 -4.67607 | opp_overlap 1482855 1482856, overlap 1482856 1482858 CGAGAGCGTAATCCT CAAAGCTGCGGCATTAA TCTAT TTAATGCCGCTGTTTGG TTTGTTTGTTGGCGC TERM 1655 1482856 - 1482884 + G 91 -11.8 -4.30977 | opp_overlap 1482855 1482856, overlap 1482851 1482858 GCGTAATCCTCAAAG CTGCGGCATTAA TCTAT TTAATGCCGCTG TTTGGTTTGTTTGTT TERM 1656 1482884 - 1482856 - g 76 -11.8 -2.76261 | opp_overlap 1482856 1482851 1482858, overlap 1482855 GCGTAATCCTCAAAG CTGCGGCATTAA TCTAT TTAATGCCGCTG TTTGGTTTGTTTGTT TERM 1657 1482858 - 1482882 + G 90 -13 -3.72091 | opp_overlap 1482856 1482855, overlap 1482856 1482851 GTAATCCTCAAAGCT GCGGCATTAA TCTAT TTAATGCCGC TGTTTGGTTTGTTTG Shew185_1242 1482624 - 1483097 + | positive regulator of sigma E, RseC/MucC TERM 1658 1483374 - 1483412 + G 81 -12.6 -2.76046 | opp_overlap 1483374, overlap 1483371 CGACCGTGAAATGGA TGCTCAAGTTTTAGATTC TAT GGATCTAGAACGTGAGCG TGGTATTACGATTAA Shew185_1243 1483264 - 1485054 + | GTP-binding protein LepA TERM 1659 1485090 - 1485108 + F 100 -13.1 -3.97057 | ATTTAGTTGACTATT GCGCCGC TGTTT GCGGCGC TTTAGTTAGGTTATC Shew185_1244 1485237 - 1486154 + | signal peptidase I Shew185_1245 1486156 - 1486836 + | ribonuclease III TERM 1660 1487289 - 1487277 - g 72 -10.5 -2.96695 | overlap 1487274 GTGCTGAGCAAATTA CGCCG TGG CGGCG AAGAGCGTCAGACGA Shew185_1246 1486833 - 1487849 + | GTP-binding protein Era Shew185_1247 1487878 - 1488588 + | DNA repair protein RecO Shew185_1248 1488659 - 1489396 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 1661 1489608 - 1489570 - g 76 -9.4 -3.90744 | opp_overlap 1489569 TTTGCCGCCAAAGAA GCTGCAGCCAAAGCGCTT GGT ACGGGCATTGGCCGCGGC GTGTCGTTCCAGCAT Shew185_1249 1489396 - 1489779 + | holo-acyl-carrier-protein synthase TERM 1662 1489826 - 1489811 - f 89 -9 -4.72272 | opp_overlap 1489811 GTCGTCTATCAAAAA GGAACC TTAG GGTTCC TTTTTTTCATTTCTG TERM 1663 1489811 - 1489826 + F 100 -9 -5.75822 | opp_overlap 1489811 GTCGTCTATCAAAAA GGAACC TTAG GGTTCC TTTTTTTCATTTCTG Shew185_1250 1489989 - 1490510 + | hypothetical protein TERM 1664 1490552 - 1490587 + T 100 -19.2 -5.24129 | overlap 1490548 TGCTCGGGGGAGCAG TCGGCCGGACTACATA TTAG TATGTGGTTCGGCCGA TTTTTTATGGGGCAA Shew185_1251 1491885 - 1490611 - | hypothetical protein TERM 1665 1491982 - 1491939 - R 82 -3.9 -5.50499 | gap 1, opp_overlap 1491940 1491941 1491946 1491955, overlap 1491940 1491941 CGACATTTAAAAAAA GTGTCAAGTCGGCAGCGGCA TTAAC TGCCTTTGCCGACTTAA-AT GTTTAGTTGAGGATT TERM 1666 1491981 - 1491940 - R 71 -7.4 -3.89215 | gap 1, opp_overlap 1491940 1491941 1491946 1491955, overlap 1491939 1491941 GACATTTAAAAAAAG TGTCAAGTCGGCAGCGGCA TTAAC TGCCTTTGCCGACTTAA-A TGTTTAGTTGAGGAT TERM 1667 1491941 - 1491981 + r 74 -9 -3.54414 | opp_overlap 1491940 1491939 1491941, overlap 1491940 1491946 1491955 ACATTTAAAAAAAGT GTCAAGTCGGCAGCGGCA TTAAC TGCCTTTGCCGACTTAAA TGTTTAGTTGAGGAT TERM 1668 1491946 - 1491976 + r 91 -13.3 -3.2655 | opp_overlap 1491940 1491941 1491939, overlap 1491941 1491940 1491955 TAAAAAAAGTGTCAA GTCGGCAGCGGCA TTAAC TGCCTTTGCCGAC TTAAATGTTTAGTTG Shew185_1252 1492773 - 1491985 - | cytochrome c assembly protein TERM 1669 1494103 - 1494091 - g 75 -3.4 -5.02715 | ACAGCAAATGAAAAA CATG GGCGG CATG ATGAACATGCTGGAA TERM 1670 1494328 - 1494301 - g 82 -12.2 -3.21063 | overlap 1494299 1494307 CACGCAAATCCAAGA CGTAAACCGTTT ATTG AAACAGTTTACG CAAATGCAAAAGATG Shew185_1253 1493063 - 1494436 + | signal recognition particle protein TERM 1671 1494580 - 1494609 + F 81 -2.7 -5.67529 | opp_overlap 1494599 CTTCCGGCTTTCTAT CTGGGACTCTTCG CGAA CACGGGGTTCCAG TTTTTATTTTTGCTT TERM 1672 1494668 - 1494652 - f 71 -6.5 -4.22652 | opp_overlap 1494652 TTAGAGGATTGAAAA CGCATGG TTA CCATTCG TTTAGCTCGTGGCGG Shew185_1254 1494655 - 1494906 + | 30S ribosomal protein S16 Shew185_1255 1494927 - 1495457 + | 16S rRNA-processing protein TERM 1673 1495965 - 1495993 + G 79 -9.5 -3.80858 | opp_overlap 1495962, overlap 1495966 CTAGGAAAACAAGCT TCGGCGGAGCAAG ATT CTTTCTCCGACGG TTTACTGGATTGTCC TERM 1674 1495966 - 1495992 + G 74 -10.8 -2.88033 | opp_overlap 1495962, overlap 1495965 TAGGAAAACAAGCTT CGGCGGAGCAAG ATT CTTTCTCCGACG GTTTACTGGATTGTC Shew185_1256 1495473 - 1496219 + | tRNA (guanine-N(1)-)-methyltransferase TERM 1675 1496288 - 1496273 - g 78 -7.6 -4.36063 | overlap 1496262 ACAACATCATTAAAA TGCTCA ACGA TGAGCA AATGAAACAAGACGT Shew185_1257 1496254 - 1496607 + | 50S ribosomal protein L19 TERM 1676 1496641 - 1496679 + F 100 -9.8 -5.18561 | gap 2, opp_overlap 1496652, overlap 1496642 1496645 1496652 ACAAGACGTAGTGTT C-GC-ACAGAAAACCGCC CTAGT GGCGGTTTTTTGTTGCTG TTTTTTGAGTATTTG TERM 1677 1496642 - 1496677 + F 100 -13.5 -4.20118 | gap 1, opp_overlap 1496652, overlap 1496641 1496645 1496652 CAAGACGTAGTGTTC GC-ACAGAAAACCGCC CTAGT GGCGGTTTTTTGTTGC TGTTTTTTGAGTATT TERM 1678 1496645 - 1496673 + F 95 -14 -3.66995 | opp_overlap 1496652, overlap 1496642 1496641 1496652 GACGTAGTGTTCGCA CAGAAAACCGCC CTAGT GGCGGTTTTTTG TTGCTGTTTTTTGAG TERM 1679 1496666 - 1496652 - f 87 -8.5 -4.52589 | opp_overlap 1496645 1496642 1496641 1496652 TGTTCGCACAGAAAA CCGCC CTAGT GGCGG TTTTTTGTTGCTGTT TERM 1680 1496652 - 1496666 + F 100 -8.5 -5.54885 | opp_overlap 1496652, overlap 1496645 1496642 1496641 TGTTCGCACAGAAAA CCGCC CTAGT GGCGG TTTTTTGTTGCTGTT Shew185_1258 1496868 - 1497959 + | phospho-2-dehydro-3-deoxyheptonate aldolase Shew185_1259 1497975 - 1499126 + | bifunctional chorismate mutase/prephenate dehydrogenase TERM 1681 1499169 - 1499151 - f 100 -14.6 -4.09864 | opp_overlap 1499151 AGTTACTCTTGAAAA CGCCCATC ATT GATGGGCG TTTTTTTATGGATTT TERM 1682 1499151 - 1499169 + F 100 -14.6 -5.68039 | opp_overlap 1499151 AGTTACTCTTGAAAA CGCCCATC ATT GATGGGCG TTTTTTTATGGATTT TERM 1683 1499653 - 1499640 - g 71 -6.7 -4.18018 | opp_overlap 1499640 1499652, overlap 1499652 CGTGCTCAGTTAAAA GCTTC TTAC GAAGC GGCTTGTGAACAAGC Shew185_1260 1499343 - 1501007 + | hydroxylamine reductase Shew185_1261 1501138 - 1502361 + | oxidoreductase FAD-binding subunit Shew185_1262 1502524 - 1502859 + | hypothetical protein Shew185_1263 1502903 - 1504207 + | sodium/hydrogen exchanger TERM 1684 1504277 - 1504236 - T 79 -8.8 -4.05208 | opp_overlap 1504239 1504242, overlap 1504238 1504239 1504242 AGCGATAGTAAACAA TATTAAGCCTGCTAGTCA TCACGC TGACTTGCAGGCTTATTT CAGTCAATCAGGGAT TERM 1685 1504275 - 1504238 - T 88 -11.4 -3.61438 | opp_overlap 1504239 1504242, overlap 1504236 1504239 1504242 CGATAGTAAACAATA TTAAGCCTGCTAGTCA TCACGC TGACTTGCAGGCTTAT TTCAGTCAATCAGGG TERM 1686 1504239 - 1504274 + T 100 -14.9 -3.6682 | opp_overlap 1504238 1504236 1504239 1504242, overlap 1504242 GATAGTAAACAATAT TAAGCCTGCTAGTCA TCACGC TGACTTGCAGGCTTA TTTCAGTCAATCAGG TERM 1687 1504274 - 1504239 - T 95 -14.9 -2.7614 | opp_overlap 1504239 1504242, overlap 1504238 1504236 1504242 GATAGTAAACAATAT TAAGCCTGCTAGTCA TCACGC TGACTTGCAGGCTTA TTTCAGTCAATCAGG TERM 1688 1504242 - 1504271 + T 91 -12.2 -3.9693 | opp_overlap 1504239 1504238 1504236 1504242, overlap 1504239 AGTAAACAATATTAA GCCTGCTAGTCA TCACGC TGACTTGCAGGC TTATTTCAGTCAATC TERM 1689 1504271 - 1504242 - T 89 -12.2 -3.51158 | opp_overlap 1504242 1504239, overlap 1504239 1504238 1504236 AGTAAACAATATTAA GCCTGCTAGTCA TCACGC TGACTTGCAGGC TTATTTCAGTCAATC TERM 1690 1504316 - 1504285 - T 91 -13.2 -3.06796 | GCTTATTTCAGTCAA TCAGGGATAAAAGA AGTC TCATTTATCCCTGA ATACACTTCGAACTA Shew185_1264 1506367 - 1504373 - | chorismate mutase TERM 1691 1506412 - 1506441 + r 79 -4.9 -5.05577 | opp_overlap 1506418, overlap 1506418 TCAATCGTTTAAGAC AAAAAAGCCTCCC AGTT GGGAGGCTTTGGA TTTTTACTTTCGTTT TERM 1692 1506435 - 1506418 - R 100 -12.7 -5.47159 | opp_overlap 1506412 1506418 GTTTAAGACAAAAAA GCCTCCC AGTT GGGAGGC TTTGGATTTTTACTT TERM 1693 1506418 - 1506435 + r 93 -12.7 -4.02315 | opp_overlap 1506418, overlap 1506412 GTTTAAGACAAAAAA GCCTCCC AGTT GGGAGGC TTTGGATTTTTACTT TERM 1694 1506600 - 1506617 + r 84 -12.7 -2.95942 | opp_overlap 1506600, overlap 1506597 CAGACTAAAAAGAAA GCGCACC CGGG GGTGCGC TGGTTTGAGTATGAA TERM 1695 1506617 - 1506600 - R 100 -12.7 -4.94262 | opp_overlap 1506600 1506597 CAGACTAAAAAGAAA GCGCACC CGGG GGTGCGC TGGTTTGAGTATGAA TERM 1696 1506929 - 1506915 - R 87 -3.6 -5.85737 | overlap 1506924 ACACTAACAAAAAAA CATTTA AAA TAAACG ATTTACGGCTCATTA Shew185_1265 1508513 - 1508157 - | sigma 54 modulation protein/ribosomal protein S30EA Shew185_1266 1508813 - 1509505 + | cytochrome B561 TERM 1697 1509558 - 1509529 - T 100 -18.1 -3.14683 | opp_overlap 1509535, overlap 1509535 AGAGTGTTTGAGTAA CAAAAAGCCTGCT AATT AGCAGGCTTTTTG ATGGACGAAAAACTA TERM 1698 1509552 - 1509535 - T 95 -11.3 -5.1356 | opp_overlap 1509535, overlap 1509529 TTTGAGTAACAAAAA GCCTGCT AATT AGCAGGC TTTTTGATGGACGAA TERM 1699 1509535 - 1509552 + T 95 -11.3 -4.72272 | opp_overlap 1509535 1509529 TTTGAGTAACAAAAA GCCTGCT AATT AGCAGGC TTTTTGATGGACGAA Shew185_1267 1510030 - 1509581 - | cytochrome c class II TERM 1700 1509805 - 1509795 - G 75 -5.4 -4.72497 | opp_overlap 1509795 GAGCCATCAATAAAA CCTT CGA AAGG AATTTTTGATAATGC Shew185_1268 1510221 - 1510496 + | Trp operon repressor Shew185_1269 1510932 - 1510561 - | hypothetical protein TERM 1701 1510884 - 1510871 - G 71 -4.5 -4.65916 | TCGAGTGCAATAAAA CTCGA ACTA CCGAG CGCCATGTAGCCAAA TERM 1702 1511064 - 1511090 + r 93 -13.8 -3.04322 | opp_overlap 1511064 CTTGCGTATAAAAAA TGCACGACCTTA AAT TAAGGGCGTGCA TCTTAAAAGGTTAAA TERM 1703 1511090 - 1511064 - R 100 -13.8 -5.24129 | opp_overlap 1511064 CTTGCGTATAAAAAA TGCACGACCTTA AAT TAAGGGCGTGCA TCTTAAAAGGTTAAA TERM 1704 1511121 - 1511099 - R 75 -7.8 -4.13767 | GCGTGCATCTTAAAA GGTTAAACTA TGG CAGTTCAACC GCTTAGGGATAAACT Shew185_1270 1511825 - 1511169 - | peptidylprolyl isomerase FKBP-type TERM 1705 1512417 - 1512387 - H 70 -8.2 -3.71353 | opp_overlap 1512390, overlap 1512378 1512390 AAAGAATTTTAACAA TGAGCCCGCTTCCC ACA AAGAAGCGGGCTTT TTTGTTTATAGCTCT TERM 1706 1512414 - 1512390 - H 95 -14.3 -2.94759 | opp_overlap 1512390, overlap 1512387 1512378 GAATTTTAACAATGA GCCCGCTTCCC ACA AAGAAGCGGGC TTTTTTGTTTATAGC TERM 1707 1512390 - 1512414 + H 100 -12.9 -5.72622 | opp_overlap 1512390 1512387 1512378 GAATTTTAACAATGA GCCCGCTTC CCACAAA GAAGCGGGC TTTTTTGTTTATAGC TERM 1708 1513381 - 1513361 - g 75 -11.9 -2.71791 | overlap 1513360 ACTCTGGTTTCAAAC CAAGCCGAT GAA ACCGGCTTG CAGGTTAAAGCTATC Shew185_1271 1512467 - 1514935 + | bifunctional aspartokinase I/homeserine dehydrogenase I Shew185_1272 1514932 - 1515894 + | homoserine kinase TERM 1709 1516140 - 1516150 + G 71 -6.8 -4.15222 | overlap 1516134 ATATTGAAGGGCTGC TGGC GTT GCCA TTTGTTGAGCGCAGT Shew185_1273 1516007 - 1517290 + | threonine synthase TERM 1710 1517364 - 1517350 - f 90 -11.4 -3.79874 | opp_overlap 1517350 CTTTACAGAAGAGAA GGGAGC TTA GCTCCC TTTTTTGTCAGCACA TERM 1711 1517350 - 1517364 + F 100 -11.4 -5.24129 | opp_overlap 1517350 CTTTACAGAAGAGAA GGGAGC TTA GCTCCC TTTTTTGTCAGCACA Shew185_1274 1517664 - 1517957 + | hypothetical protein Shew185_1275 1518247 - 1519104 + | extracellular solute-binding protein Shew185_1276 1519463 - 1522747 + | peptidase S41 TERM 1712 1522816 - 1522850 + T 93 -10.1 -4.8543 | opp_overlap 1522814 1522817, overlap 1522817 GTCGCGTACAAAGTT AGGGTGTTGTCTC TTAGTTCCC GAGACAACACCCA TTTTTATGCCCATTC TERM 1713 1522817 - 1522849 + T 95 -13.6 -3.50535 | opp_overlap 1522814 1522817, overlap 1522816 TCGCGTACAAAGTTA GGGTGTTGTCTC TTAGTTCCC GAGACAACACCC ATTTTTATGCCCATT TERM 1714 1522849 - 1522817 - T 91 -13.6 -2.70354 | opp_overlap 1522817 1522816, overlap 1522814 TCGCGTACAAAGTTA GGGTGTTGTCTC TTAGTTCCC GAGACAACACCC ATTTTTATGCCCATT TERM 1715 1523243 - 1523217 - T 95 -8.7 -5.4505 | gap 1 TGCGGCAATAAAAAA GCCCGCTTA-GG AAAA CCATTAGCGGGC CGTAGATATCAGCAC Shew185_1278 1523701 - 1523264 - | OsmC family protein Shew185_1279 1524159 - 1523809 - | hypothetical protein Shew185_1280 1525883 - 1524156 - | PepSY-associated TM helix domain-containing protein TERM 1716 1524217 - 1524234 + gr 73 -8.3 -3.68222 | GCTAGGGATGTTTGT GGCTCGC TGCG GCGCGCC TTATTCGCCTTGGCA TERM 1717 1525461 - 1525450 - GR 90 -5.8 -5.40625 | opp_overlap 1525455, overlap 1525452 AGACGATAGAAAAAA TCGC CGCC GCGA CTCTCGCGCACTTCT Shew185_1281 1526238 - 1525855 - | hypothetical protein TERM 1718 1525992 - 1525979 - GH 84 -6.7 -4.94487 | opp_overlap 1525977 1525979 GCATAAAACAGAAAA GCCAA CATA TTGGC TGTTATTGTGCTTTC Shew185_1282 1526669 - 1528237 + | methyl-accepting chemotaxis sensory transducer TERM 1719 1528751 - 1528726 - g 73 -2 -5.08824 | gap 1, opp_overlap 1528714, overlap 1528729 GCCGCATCGAAAAAA TTA-GATGCTT CACTT AAGCACCGTAA AGGTCAGCTAAAAGC Shew185_1283 1528486 - 1528842 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 1720 1528876 - 1528903 + T 95 -14.3 -3.08966 | opp_overlap 1528873 1528882, overlap 1528882 CGCCTTAGATGAGTA CAAAAAGGGCC TTAACT GGCCCTTTTTG TTGGCTGCAATTTGA TERM 1721 1528882 - 1528897 + T 86 -7.5 -5.10461 | opp_overlap 1528873 1528882, overlap 1528876 AGATGAGTACAAAAA GGGCC TTAACT GGCCC TTTTTGTTGGCTGCA TERM 1722 1528897 - 1528882 - T 85 -7.5 -4.93898 | opp_overlap 1528882 1528876, overlap 1528873 AGATGAGTACAAAAA GGGCC TTAACT GGCCC TTTTTGTTGGCTGCA Shew185_1284 1529458 - 1528934 - | putative transmembrane protein Shew185_1285 1530216 - 1529566 - | two component LuxR family transcriptional regulator Shew185_1286 1531423 - 1530245 - | integral membrane sensor signal transduction histidine kinase Shew185_1287 1531607 - 1532116 + | hypothetical protein TERM 1723 1533249 - 1533239 - g 71 -6.8 -4.28994 | CAGCAGCTAGCAAAA CGCA GTT TGCG GGGACGTTATCTCCC Shew185_1288 1532131 - 1533795 + | carotenoid oxygenase TERM 1724 1533840 - 1533812 - T 100 -19.1 -3.93136 | opp_overlap 1533812 1533818, overlap 1533818 ATATTGACCTATAAA TAAAAACGCAGCC AAG GGCTGCGTTTTTA TTTCAGGCGAAAGCG TERM 1725 1533812 - 1533840 + T 100 -19.1 -3.53012 | opp_overlap 1533812 1533818, overlap 1533818 ATATTGACCTATAAA TAAAAACGCAGCC AAG GGCTGCGTTTTTA TTTCAGGCGAAAGCG TERM 1726 1533818 - 1533834 + T 100 -13.7 -5.27335 | opp_overlap 1533812 1533818, overlap 1533812 ACCTATAAATAAAAA CGCAGCC AAG GGCTGCG TTTTTATTTCAGGCG TERM 1727 1533834 - 1533818 - T 100 -13.7 -5.38958 | opp_overlap 1533818 1533812, overlap 1533812 ACCTATAAATAAAAA CGCAGCC AAG GGCTGCG TTTTTATTTCAGGCG Shew185_1289 1534582 - 1533860 - | hypothetical protein TERM 1728 1534829 - 1534847 + H 70 -8.2 -3.61715 | overlap 1534821 TACTTTGTTTATCTA GCTGGATA AAT TATCTAGC TTATTCAGAGAAATA TERM 1729 1536357 - 1536343 - g 72 -5.7 -4.33417 | CCGACCCATAATAAA CGCTT TAGCC AAGCG CTGACGGGCAAGGTC Shew185_1290 1535002 - 1536570 + | methyl-accepting chemotaxis sensory transducer Shew185_1291 1536905 - 1537129 + | hypothetical protein Shew185_1292 1538117 - 1537536 - | TetR family transcriptional regulator TERM 1730 1538236 - 1538217 - H 70 -8 -3.63464 | overlap 1538215 GTTCAAATAATAATA TCTTGAAT GCAT ATTCAAGA ATGGGACTGAGAAAA TERM 1731 1538484 - 1538494 + G 75 -5.4 -4.72272 | opp_overlap 1538484 TCAAGGTTACCCAAA TACC CCT GGTA TTTTTACTCAAGCGC Shew185_1293 1538251 - 1539318 + | NADH:flavin oxidoreductase/NADH oxidase TERM 1732 1539364 - 1539345 - T 100 -12.2 -4.68209 | opp_overlap 1539345 AGCTTAATAAAGAAA GGGTTAGC ATTG GCTAACCC TTTTTGTTTGTCTTT TERM 1733 1539345 - 1539364 + T 100 -12.2 -5.48623 | opp_overlap 1539345 AGCTTAATAAAGAAA GGGTTAGC ATTG GCTAACCC TTTTTGTTTGTCTTT Shew185_1294 1541810 - 1539393 - | peptidase S16, lon domain-containing protein Shew185_1295 1542345 - 1545110 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Shew185_1296 1545266 - 1546501 + | DEAD/DEAH box helicase domain-containing protein Shew185_1297 1546694 - 1547206 + | hypothetical protein TERM 1734 1547459 - 1547424 - T 100 -15.6 -3.86916 | opp_overlap 1547430, overlap 1547430 CATGAGCAGAGCAAA CAAAAAGGGCTTAACC TTGC GGTTAAGCCCTTCTGG TAAAATTGGTGGAGG TERM 1735 1547430 - 1547453 + T 100 -15.4 -3.42574 | opp_overlap 1547430 1547424 CAGAGCAAACAAAAA GGGCTTAACC TTGC GGTTAAGCCC TTCTGGTAAAATTGG TERM 1736 1547453 - 1547430 - T 100 -15.4 -5.35815 | opp_overlap 1547430, overlap 1547424 CAGAGCAAACAAAAA GGGCTTAACC TTGC GGTTAAGCCC TTCTGGTAAAATTGG Shew185_1298 1548384 - 1547893 - | SsrA-binding protein TERM 1737 1548106 - 1548118 + g 71 -4.8 -4.56597 | ATCAAGCTCTTTACG GCTG AGTAG CAGC TTTTTCAAGCGCAGG TERM 1738 1548177 - 1548205 + g 73 -5.2 -4.58395 | opp_overlap 1548177 TATTCAAGGGAATAA TGGTGCAGCCAT GCATA AAGGCTTCGCCA TTTTTCAGGAATACG TERM 1739 1548514 - 1548528 + H 72 -3.5 -5.13473 | overlap 1548515 GAGTATCAGCTTAAG TGCAC AAGGG GTGCG TTTTTTACGTATCGT Shew185_1299 1548663 - 1549100 + | cyclase/dehydrase Shew185_1300 1549090 - 1549422 + | hypothetical protein TERM 1740 1549442 - 1549460 + T 75 -10.4 -3.18264 | opp_overlap 1549440 GTTGGTATAACTACT TGATGTCA GTT TGACATCA TTACTCAATGAAAAA TERM 1741 1549469 - 1549496 + T 88 -11.4 -3.55604 | opp_overlap 1549476, overlap 1549476 GACATCATTACTCAA TGAAAAAGCGCC CTTG GGCGCTTTTTTG TATTTCATTGACTGA TERM 1742 1549476 - 1549489 + T 100 -9.5 -5.5762 | opp_overlap 1549476, overlap 1549469 TTACTCAATGAAAAA GCGCC CTTG GGCGC TTTTTTGTATTTCAT TERM 1743 1549489 - 1549476 - T 93 -9.5 -4.88407 | opp_overlap 1549469 1549476 TTACTCAATGAAAAA GCGCC CTTG GGCGC TTTTTTGTATTTCAT Shew185_1301 1550116 - 1549538 - | SmpA/OmlA domain-containing protein TERM 1744 1549997 - 1549982 - G 75 -10.4 -3.27676 | overlap 1549980 1549978 ACTGAGCGAAACAGA GAGCGC CACA GCGCTC AGCAGGGTAAGACTT TERM 1745 1549999 - 1550015 + g 82 -5.1 -5.16071 | opp_overlap 1549978 GCGCCACAGCGCTCA GCAGGGT AAG ACTTTGC TTTTTATTGATCATT Shew185_1302 1550459 - 1551250 + | uroporphyrin-III C/tetrapyrrole methyltransferase Shew185_1303 1551310 - 1551525 + | hypothetical protein TERM 1746 1551561 - 1551579 + F 73 -9.6 -3.18383 | TTTGTGGTTATGTTC GGGCATAT TTT GTATGCCC TTAATGGCTGCAACT Shew185_1304 1551574 - 1553319 + | diguanylate cyclase TERM 1747 1553593 - 1553610 + F 72 -9.1 -3.31726 | overlap 1553591 CATAGTTGCTAATTC GCCTAGC TGCG GCTGGGC TATTATATGGAACAC TERM 1748 1554223 - 1554233 + G 71 -6.8 -4.23674 | ACTGGACGTGTCTAG CCCT AGT AGGG TTTGTGTTAGTGGGC TERM 1749 1555031 - 1555042 + G 80 -7.2 -4.48713 | GATGTCGGCGGGGAT CGCG CGCT CGCG TTTGTTATTGCTGGC Shew185_1305 1553655 - 1555424 + | potassium efflux system protein TERM 1750 1555491 - 1555474 - T 89 -9.9 -4.1721 | opp_overlap 1555474 ATTTAGATGTCAAAA GAGAGCA TAAA TGCTCTC TTTTTTGTTGGAAAC TERM 1751 1555474 - 1555491 + T 100 -9.9 -5.4505 | opp_overlap 1555474 ATTTAGATGTCAAAA GAGAGCA TAAA TGCTCTC TTTTTTGTTGGAAAC Shew185_1306 1558015 - 1555553 - | TonB-dependent receptor plug TERM 1752 1558231 - 1558253 + H 86 -7.2 -5.08015 | AATTTCAAATTTGTT TCATTTTTTT TAT AAAAAAGTGA TTTATTTTTTGAGTT TERM 1753 1558657 - 1558669 + H 71 -6.3 -4.18697 | GTTGTTTTTTGTTGC TTGGT CAG ACCAA TTTTAGCATGGTTTT TERM 1754 1559593 - 1559606 + G 73 -5.3 -4.63218 | GAAGCGCGCTGGTGG GCAAA AGTA TTTGC TTTTGTTGAGGAAAG TERM 1755 1559899 - 1559913 + G 73 -7 -4.16842 | opp_overlap 1559870 GGTGCGTTAGCGATG GGCGGC ATG GCGGCC TTTATTCCAGCTAAA Shew185_1307 1558876 - 1560525 + | malate synthase Shew185_1308 1560666 - 1561991 + | isocitrate lyase TERM 1756 1562182 - 1562198 + F 70 -8.7 -3.31263 | overlap 1562184 CCGTAAGCCTGTGTT TAGCTGC TTT GCAGCTG TTATCCCCGTGCAGT TERM 1757 1562184 - 1562196 + F 70 -9.1 -3.22475 | overlap 1562182 GTAAGCCTGTGTTTA GCTGC TTT GCAGC TGTTATCCCCGTGCA TERM 1758 1562296 - 1562316 + F 100 -11.9 -5.71638 | overlap 1562298 TTGCTTGCCTTAGCT TGGCGACTC TAT GAGTCGCTA TTTTTTTGCTTATTG TERM 1759 1562298 - 1562314 + F 100 -12.3 -4.46828 | overlap 1562296 GCTTGCCTTAGCTTG GCGACTC TAT GAGTCGC TATTTTTTTGCTTAT Shew185_1309 1562792 - 1563160 + | thioesterase superfamily protein TERM 1760 1563237 - 1563216 - T 70 -8.7 -3.43676 | opp_overlap 1563213 1563218, overlap 1563212 1563214 1563218 GATACTTAAAACAGA CAGTGACGC CTAG GCGTCACTC TGATTAGTCTTTGGT TERM 1761 1563235 - 1563218 - T 85 -11.3 -3.2785 | opp_overlap 1563218 1563213, overlap 1563216 1563212 1563214 TACTTAAAACAGACA GTGACGC CTAG GCGTCAC TCTGATTAGTCTTTG TERM 1762 1563218 - 1563235 + T 81 -11.3 -2.9805 | opp_overlap 1563216 1563212 1563214 1563218, overlap 1563213 TACTTAAAACAGACA GTGACGC CTAG GCGTCAC TCTGATTAGTCTTTG Shew185_1310 1563447 - 1563241 - | hypothetical protein TERM 1763 1563707 - 1563682 - R 100 -11.2 -5.33405 | gap 1, opp_overlap 1563682, overlap 1563676 TTCAGTAAATAAAAA CGCCAGTGGCG TTTTG CGC-ACTGGCG TCTAAGGTCGCTAAA TERM 1764 1563682 - 1563692 + r 75 -8.2 -4.09685 | opp_overlap 1563676 1563682 TTCAGTAAATAAAAA CGCC AGT GGCG TTTTGCGCACTGGCG Shew185_1311 1564102 - 1563737 - | hypothetical protein TERM 1765 1564525 - 1564496 - R 90 -12.9 -2.6187 | opp_overlap 1564492 1564493, overlap 1564489 1564492 1564500 AGAAGGCAGAATGGA CAGAGGCCCATTC GTTA GAACGGGCCTCTC AGCTGGCTTCATCTT TERM 1766 1564521 - 1564500 - R 84 -12.3 -2.96711 | opp_overlap 1564492 1564493, overlap 1564489 1564496 1564492 GGCAGAATGGACAGA GGCCCATTC GTTA GAACGGGCC TCTCAGCTGGCTTCA TERM 1767 1564818 - 1564778 - R 100 -16.4 -5.32882 | opp_overlap 1564788 TACCAGTATAAAAAA GGCCCCAATAGTGCAGC-GA TAA TCTGC-GCACTATTGGAGCC CAAAACGCATTCATT TERM 1768 1564883 - 1564919 + r 70 -9.5 -2.50443 | opp_overlap 1564888, overlap 1564882 AATAAGTCGTTATCC AGCAAGTTAGCGCAC GATTACA GTGCGATAACTTGCG ATTGGTAAGGTATGG Shew185_1312 1566099 - 1564951 - | iron-containing alcohol dehydrogenase Shew185_1313 1566710 - 1567315 + | transcriptional regulator BetI TERM 1769 1567852 - 1567841 - g 73 -7.2 -4.15788 | overlap 1567842 AACCTTCGGAAGAAA CGCC GCTT GGCG CACTGAAATTAGCGC TERM 1770 1568254 - 1568276 + G 72 -11.3 -2.55351 | opp_overlap 1568268, overlap 1568253 GTGGGCGATCCTATG GCGCCAGAG ACTAA CTTTGGCGC GTTGATCTCCAAAGA Shew185_1314 1567306 - 1568769 + | betaine aldehyde dehydrogenase TERM 1771 1570397 - 1570411 + G 89 -12.8 -3.50853 | CTGAGATGTTAGCGC CGGCGG ATT CCGCCG TTGTGGTTGCCGACG Shew185_1315 1568779 - 1570464 + | choline dehydrogenase Shew185_1316 1570855 - 1572072 + | putative transporter, BCCT family protein Shew185_1317 1572072 - 1572791 + | hypothetical protein Shew185_1318 1572883 - 1573359 + | MarR family transcriptional regulator TERM 1772 1573414 - 1573445 + T 83 -11.8 -3.11836 | opp_overlap 1573401 1573415 1573421, overlap 1573421 GATTCGTTTTTAAAA TGAAAAAGCACTGA ATAT TCAGTGCTTTTTTG CTTTTAGCTAGATAT TERM 1773 1573444 - 1573415 - T 78 -10.9 -3.04517 | opp_overlap 1573414 1573421, overlap 1573401 1573421 ATTCGTTTTTAAAAT GAAAAAGCACTGA ATAT TCAGTGCTTTTTT GCTTTTAGCTAGATA TERM 1774 1573438 - 1573421 - T 93 -9.9 -5.0925 | opp_overlap 1573421 1573414, overlap 1573415 TTTTAAAATGAAAAA GCACTGA ATAT TCAGTGC TTTTTTGCTTTTAGC TERM 1775 1573421 - 1573438 + T 100 -9.9 -5.46698 | opp_overlap 1573415 1573421, overlap 1573414 TTTTAAAATGAAAAA GCACTGA ATAT TCAGTGC TTTTTTGCTTTTAGC Shew185_1319 1574116 - 1573487 - | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 1776 1573943 - 1573960 + g 71 -4.1 -4.68539 | GTTCGTTAAGTCAAT GGCGA GTGTGATA TCGCC TTTTGTGGTTTTCAT TERM 1777 1574825 - 1574813 - g 89 -3.3 -5.58454 | opp_overlap 1574818, overlap 1574815 1574817 GTTACAGGAAAAAAA CACTG TGG CAGGG ACTGCCATTGATGCT TERM 1778 1574818 - 1574832 + G 73 -10 -3.31188 | opp_overlap 1574813 1574817 1574815 AGGAAAAAAACACTG TGGCAG GGA CTGCCA TTGATGCTTCTGCTA Shew185_1320 1574685 - 1577111 + | 4-alpha-glucanotransferase Shew185_1321 1577226 - 1579457 + | glycogen branching enzyme TERM 1779 1580148 - 1580193 + G 77 -3.9 -5.14563 | gap 1 TGCTATCGATTATTT GGCC-GAACTTGGGGTGACGTG CAT CGAGTTACTTCCAGTACAGGCC TTTTTTACTGAACCA Shew185_1322 1579459 - 1581660 + | glycogen debranching enzyme GlgX TERM 1780 1584137 - 1584148 + G 80 -7.2 -4.63928 | opp_overlap 1584133, overlap 1584132 TATTCGCAATACCGC CGCC AGCG GGCG TTTTTCGAGTGATGT Shew185_1323 1581672 - 1584203 + | glycogen/starch/alpha-glucan phosphorylase TERM 1781 1584342 - 1584328 - f 81 -11.4 -3.06671 | ATACTCAGGGGAATA CGGCAG TTT CTGCCG TATCGAGAAGCCATT TERM 1782 1584972 - 1584962 - g 71 -4.6 -4.63486 | AGGCTTTGAAGAAAA GCCG CAG CAGC CTAAACATTCTCCGG Shew185_1324 1584396 - 1585658 + | glucose-1-phosphate adenylyltransferase TERM 1783 1585740 - 1585769 + F 70 -8.7 -3.28269 | opp_overlap 1585739, overlap 1585718 1585743 TCGAGCTTTAAGTAC GGGCTTAAGTTAA GTGT TTAGATTAAGCCC TTAGATTTAGCGCTT TERM 1784 1585897 - 1585878 - g 71 -7 -4.07568 | overlap 1585879 GGTCGCGGCTGAAAA CGGTGCCC TTGC GGGCGCCA AGGTTGGCGGTATGG TERM 1785 1585977 - 1585989 + G 73 -4.8 -4.66609 | CGCCGATGTGATTAT GCCA AGCTA TGGC TTTTTGACTGCGGTC Shew185_1325 1585843 - 1587462 + | starch synthase catalytic subunit TERM 1786 1589110 - 1589130 + G 73 -5.4 -4.62336 | overlap 1589112 TATTCGGTTGCTTTA TTGTGACC TCAAT GGTCGCGA TTTTTACACTCAAAT Shew185_1326 1587593 - 1590640 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 1787 1590707 - 1590679 - f 85 -7.3 -4.84017 | opp_overlap 1590704, overlap 1590680 AATTGCCTATAAAAA CGCCGCGGATTTT GCT AGACTCCGCGGCC CCGCGTTGGGGCATT TERM 1788 1590706 - 1590680 - f 82 -10.8 -3.49687 | opp_overlap 1590704, overlap 1590679 ATTGCCTATAAAAAC GCCGCGGATTTT GCT AGACTCCGCGGC CCCGCGTTGGGGCAT Shew185_1327 1590770 - 1592188 + | DEAD/DEAH box helicase domain-containing protein TERM 1789 1592269 - 1592233 - f 80 -10.1 -3.6849 | opp_overlap 1592233, overlap 1592234 1592237 1592246 AGGTAAGCCCAACAA TCAAGGCTAATAAGCGC CAA GCGCCTGTCAGCCTCGC TGGTTAACGGTTGCC TERM 1790 1592268 - 1592234 - f 91 -13.6 -2.80612 | opp_overlap 1592233, overlap 1592233 1592237 1592246 GGTAAGCCCAACAAT CAAGGCTAATAAGCGC CAA GCGCCTGTCAGCCTCG CTGGTTAACGGTTGC TERM 1791 1592265 - 1592237 - f 89 -11.7 -3.5456 | opp_overlap 1592233, overlap 1592234 1592233 1592246 AAGCCCAACAATCAA GGCTAATAAGCGC CAA GCGCCTGTCAGCC TCGCTGGTTAACGGT TERM 1792 1592256 - 1592246 - f 70 -8.2 -3.69338 | opp_overlap 1592233, overlap 1592237 1592234 1592233 AATCAAGGCTAATAA GCGC CAA GCGC CTGTCAGCCTCGCTG TERM 1793 1592337 - 1592318 - f 83 -9.3 -4.13767 | opp_overlap 1592318 GTCGCCATTCTAAAA GCGCATC CTCATC GATGCGC TTTTTGTTGAGCTTC TERM 1794 1592318 - 1592337 + F 90 -9.3 -5.10208 | opp_overlap 1592318 GTCGCCATTCTAAAA GCGCATC CTCATC GATGCGC TTTTTGTTGAGCTTC Shew185_1328 1592408 - 1593514 + | cobalamin synthesis protein P47K Shew185_1329 1594401 - 1593640 - | extracellular solute-binding protein TERM 1795 1594102 - 1594084 - G 81 -9.6 -4.08945 | ATTATCGCGGTAAAA GGCTTTCG TCG CAAAAGCC AAGTTTGCTTCACGC Shew185_1330 1594793 - 1595317 + | hypothetical protein TERM 1796 1595356 - 1595327 - T 95 -13.7 -3.39327 | opp_overlap 1595327 TTTTGATACTGATAA GGCAAGATGAAGA TTGC TCCTCACCTTGCC TTTATTTAGCCCTTA TERM 1797 1595327 - 1595356 + T 86 -9.3 -4.43877 | opp_overlap 1595327 TTTTGATACTGATAA GGCAAGATGAAGA TTGC TCCTCACCTTGCC TTTATTTAGCCCTTA Shew185_1331 1596959 - 1595418 - | major facilitator transporter TERM 1798 1595506 - 1595474 - G 73 -2.5 -5.05601 | overlap 1595475 TACCATAGATAAAAA TCCCCACCGCTGAGA TAG TCCCTATGGCGGCGA TGATGTACCACGCCA TERM 1799 1596600 - 1596586 - G 70 -7.8 -3.95584 | overlap 1596595 GCGCCAGCAAGGAAA CCCCAA AAG CTGGGG AAGAATGCCATCACC TERM 1800 1597691 - 1597702 + G 75 -5.8 -4.63527 | TTAGTTTGTGTTTAT TGGC GGGA GCCA TTTTTGCCCTCATGG TERM 1801 1598102 - 1598118 + G 71 -4.4 -4.73388 | gap 1, overlap 1598105 GCTTGAACATAGCCC GCGTGGG TTTA CCCA-GC TTTTTGATGAACCTT Shew185_1332 1597360 - 1598715 + | multi anti extrusion protein MatE Shew185_1333 1599186 - 1600697 + | hypothetical protein TERM 1802 1600792 - 1600770 - f 85 -7.6 -4.96773 | overlap 1600772 TTAATCAAAAACAAA GTCGTGGGGC TTC ACCCCACACC CGACCAAGGAGGACT TERM 1803 1602374 - 1602352 - g 80 -12.2 -2.76261 | overlap 1602351 GGTTAATGGGTAAAC CGCTATTAAA ACA TTTAATAGCG TCACAATGAAAAGCC Shew185_1334 1601346 - 1602383 + | hypothetical protein Shew185_1335 1603746 - 1602568 - | ATPase central domain-containing protein TERM 1804 1602670 - 1602643 - G 90 -12.8 -3.75766 | TTCACAACCTAACAA TGGCTCAGTTCT ATTA AGAACTGCGCCA AAACGCTCAAAGTAG TERM 1805 1604325 - 1604299 - R 73 -8.8 -3.65314 | gap 1, opp_overlap 1604298 1604303, overlap 1604303 GCGAAGTCTCAATAA GAAAGCCG-CC AATGAA GGTCGGCTTTC GTGATTCGATTGTCC Shew185_1336 1604952 - 1604383 - | hypothetical protein Shew185_1337 1606348 - 1604954 - | hypothetical protein TERM 1806 1605800 - 1605788 - G 70 -7.7 -3.81488 | GCGGGTTAAATACAA GGGAT CGG ATCCC CCCGCTTTAGTACCG TERM 1807 1605827 - 1605847 + g 85 -10.5 -4.29508 | opp_overlap 1605830 ACCGATTTTCTCATG GAAGAGGTC GCC GACTTCTTC TTTCTTCATATGGAT TERM 1808 1606085 - 1606106 + g 71 -4.5 -4.64334 | gap 1, opp_overlap 1606084, overlap 1606086 TTTGGCCCAATGGAC TTGTAT-GCC GTT GGCGATACAG TTTTGTTCAAAGGTT TERM 1809 1606208 - 1606222 + g 100 -9.2 -4.9725 | TTCTGGGATGCTACC CGCGGC GCG GTCGCG TTTTTCTCTGAGCAT Shew185_1338 1607102 - 1606359 - | hypothetical protein TERM 1810 1607370 - 1607389 + r 83 -9.2 -4.03811 | opp_overlap 1607370 GCTTATATAAACAAA CGGGGCTA AATA TCGCCCCG TTGTTTACTACTGTC TERM 1811 1607389 - 1607370 - R 88 -9.2 -4.62441 | opp_overlap 1607370 GCTTATATAAACAAA CGGGGCTA AATA TCGCCCCG TTGTTTACTACTGTC Shew185_1339 1610217 - 1607413 - | FAD linked oxidase domain-containing protein TERM 1812 1607573 - 1607586 + g 77 -6.7 -4.57073 | CTGGCGTTGATTTCA GGCTT ATAC AAGCC TTTTTCACCCGCGTA TERM 1813 1609097 - 1609079 - G 71 -6.6 -4.18702 | opp_overlap 1609080, overlap 1609080 ATAATTGGGAACAAA CCTGAGCG CAT CGCCCAGT ATTTGCTGTAAACAT TERM 1814 1609096 - 1609080 - G 73 -10.1 -3.10498 | opp_overlap 1609080, overlap 1609079 TAATTGGGAACAAAC CTGAGCG CAT CGCCCAG TATTTGCTGTAAACA TERM 1815 1610272 - 1610243 - R 74 -4.9 -4.66833 | opp_overlap 1610246, overlap 1610244 1610246 1610250 TCTTAACGCTAAAAA TGACCAAGGCCGC CGCA GCGACCTTAGTTT TCAATGGGCTTAGAA TERM 1816 1610271 - 1610244 - R 70 -8.4 -3.39618 | opp_overlap 1610246, overlap 1610243 1610246 1610250 CTTAACGCTAAAAAT GACCAAGGCCGC CGCA GCGACCTTAGTT TTCAATGGGCTTAGA TERM 1817 1610269 - 1610246 - R 79 -11 -3.26237 | opp_overlap 1610246, overlap 1610244 1610243 1610250 TAACGCTAAAAATGA CCAAGGCCGC CGCA GCGACCTTAG TTTTCAATGGGCTTA TERM 1818 1610246 - 1610269 + r 73 -6.6 -4.19704 | opp_overlap 1610244 1610243 1610246 1610250 TAACGCTAAAAATGA CCAAGGCCGC CGCA GCGACCTTAG TTTTCAATGGGCTTA Shew185_1340 1611925 - 1610282 - | L-lactate permease TERM 1819 1611815 - 1611797 - G 72 -5.9 -4.42062 | CATTTGCCAAATAAA CACAGCG GCGAG CGCAGTG ACTAGCATGGAAATG TERM 1820 1612462 - 1612475 + r 79 -5.3 -5.1101 | AGGTGGTTTTTTATA GTGAT CCAG ATCAC TTTTTTAAATGGTGG TERM 1821 1612896 - 1612912 + r 80 -8 -4.386 | opp_overlap 1612896 AGAAGGAATAAAAAA GAGACG GGATA CGTCTC TTTTATGGGAACTTG TERM 1822 1612912 - 1612896 - R 100 -8 -5.57396 | opp_overlap 1612896 AGAAGGAATAAAAAA GAGACG GGATA CGTCTC TTTTATGGGAACTTG Shew185_1341 1613892 - 1612963 - | ATP-NAD/AcoX kinase Shew185_1342 1613942 - 1614562 + | GrpE protein TERM 1823 1614624 - 1614607 - T 100 -11.3 -5.5353 | opp_overlap 1614607 GACAGCAACAAAAAA GGACTGC AATT GCAGTCC TTTTTTTATGGGCGG TERM 1824 1614607 - 1614624 + T 100 -11.3 -5.60993 | opp_overlap 1614607 GACAGCAACAAAAAA GGACTGC AATT GCAGTCC TTTTTTTATGGGCGG Shew185_1343 1616619 - 1614751 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1825 1614927 - 1614940 + g 75 -5.2 -4.66987 | opp_overlap 1614912 CGCCAGCACCAGCGC CGCC CATAAT GGCG TTTTCTTCCACTGTG TERM 1826 1616304 - 1616316 + g 75 -3.4 -5.01497 | opp_overlap 1616304 CACGCCATGGGAAAG GATG CAAGC CATC TTTTTGTCTAATGGT Shew185_1344 1617522 - 1616641 - | polyprenyl synthetase Shew185_1345 1617764 - 1617525 - | exodeoxyribonuclease VII, small subunit TERM 1827 1618335 - 1618350 + G 88 -7.5 -5.09426 | TGACTATGGCTGATG CCGCC CGTAAA GGCGG TTTTTTAGCCTTAGA Shew185_1346 1618079 - 1618846 + | flagellar motor protein PomA Shew185_1347 1618850 - 1619782 + | flagellar motor protein MotB TERM 1828 1619809 - 1619827 + F 100 -11 -5.4505 | opp_overlap 1619809 CTCACTGCATCTAAA GCCGCAAT CCT GTTGCGGC TTTTTTATTGGGCGA TERM 1829 1619827 - 1619809 - f 80 -10.3 -3.65902 | opp_overlap 1619809 CTCACTGCATCTAAA GCCGCAA TCCTG TTGCGGC TTTTTTATTGGGCGA Shew185_1348 1620255 - 1621709 + | thiamine biosynthesis protein ThiI TERM 1830 1621762 - 1621711 - T 86 -11.1 -3.86897 | gap 1, overlap 1621721 TGTATCGCCCATAAA TCCATGCAAACTTGCCCACTGACA TGTCT TGTCAGTGGG-AAGTGCCCATAGA GATTGAATACAAAAA TERM 1831 1621752 - 1621721 - T 90 -12.5 -3.70478 | gap 1, overlap 1621711 ATAAATCCATGCAAA CTTGCCCACTGACA TGTCT TGTCAGTGGG-AAG TGCCCATAGAGATTG TERM 1832 1621773 - 1621802 + T 100 -12.3 -4.4261 | opp_overlap 1621779, overlap 1621779 ATAGAGATTGAATAC AAAAAAGCCGCAT ATGA ATGCGGCTTTTTC TTTTGGTCTTCGCGG TERM 1833 1621796 - 1621779 - T 100 -11.3 -5.48063 | opp_overlap 1621773 1621779 ATTGAATACAAAAAA GCCGCAT ATGA ATGCGGC TTTTTCTTTTGGTCT TERM 1834 1621779 - 1621796 + T 100 -11.3 -5.52079 | opp_overlap 1621779, overlap 1621773 ATTGAATACAAAAAA GCCGCAT ATGA ATGCGGC TTTTTCTTTTGGTCT Shew185_1349 1622083 - 1621841 - | hypothetical protein TERM 1835 1622694 - 1622654 - g 74 -4 -4.87665 | gap 1, overlap 1622655 1622656 GTTCAGTGAGAAAAA TCCCGATATCGACGTGCGT ATTA AAGC-CGTCGATACCGAAG CGAGCTCATTAACCG Shew185_1350 1622295 - 1623206 + | DNA-binding transcriptional activator GcvA Shew185_1351 1623187 - 1623831 + | hypothetical protein Shew185_1352 1623890 - 1624282 + | hypothetical protein TERM 1836 1624329 - 1624309 - f 81 -11.2 -3.09175 | opp_overlap 1624309 AAGTGTGAGTTAACA GGCTTAGG GCGCA CCTAAGCC TTTTTTATTTCTCCA TERM 1837 1624309 - 1624329 + F 100 -11.2 -5.72622 | opp_overlap 1624309 AAGTGTGAGTTAACA GGCTTAGG GCGCA CCTAAGCC TTTTTTATTTCTCCA Shew185_1353 1624461 - 1625546 + | putative RNA 2'-O-ribose methyltransferase TERM 1838 1625731 - 1625710 - T 100 -12.3 -5.24796 | opp_overlap 1625710 GCCAGATAACAAAAA GCCCCAAAG GAAA CTTCGGGGC TTTTTCATGTTTACT TERM 1839 1625710 - 1625731 + T 93 -10.1 -4.946 | opp_overlap 1625710 GCCAGATAACAAAAA GCCCCAAAG GAAA CTTCGGGGC TTTTTCATGTTTACT TERM 1840 1625822 - 1625795 - T 73 -8.4 -3.62597 | CTTATGCTTGAACAA GCGCGTTATAGA CTCG TCTTAAACGCGC TCAGCATTGCGATCA Shew185_1354 1626842 - 1625835 - | isocitrate dehydrogenase TERM 1841 1627319 - 1627303 - g 73 -5.1 -4.59773 | opp_overlap 1627303, overlap 1627305 CGTCATTGTGAAAAA TGTGCTG TCG CAGCAAA GTTATCAAATCGCGG TERM 1842 1627608 - 1627590 - g 73 -7.4 -4.15006 | overlap 1627591 1627602 ATACTGAGCCTAAAA CCAGCGAA AAA CTCGCTGA AGCAGGCACACAAAC TERM 1843 1628429 - 1628442 + G 77 -3.8 -5.08824 | GTCGACATTAACACT GGCA GTAAGG TGCC TTTTTTGACTCAGCA Shew185_1355 1627097 - 1629931 + | peptidase S9 prolyl oligopeptidase TERM 1844 1630041 - 1630011 - T 100 -14.9 -3.84246 | opp_overlap 1630011 1630017, overlap 1630017 TGGTTAATTATGAAA CAAAAACGCCACC GATTA GGTGGCGTTTTTA TTTAGCAGTCAGTCG TERM 1845 1630011 - 1630041 + T 90 -12.7 -3.57792 | opp_overlap 1630011 1630017, overlap 1630017 TGGTTAATTATGAAA CAAAAACGCCACC GATTA GGTGGCGTTTTTA TTTAGCAGTCAGTCG TERM 1846 1630017 - 1630035 + T 100 -11.7 -5.27938 | opp_overlap 1630011 1630017, overlap 1630011 ATTATGAAACAAAAA CGCCACC GATTA GGTGGCG TTTTTATTTAGCAGT TERM 1847 1630035 - 1630017 - T 100 -11.7 -5.34309 | opp_overlap 1630017 1630011, overlap 1630011 ATTATGAAACAAAAA CGCCACC GATTA GGTGGCG TTTTTATTTAGCAGT Shew185_1356 1630482 - 1630060 - | hypothetical protein Shew185_1357 1631381 - 1630593 - | exonuclease IX Shew185_1358 1632758 - 1631403 - | hypothetical protein TERM 1848 1632028 - 1632047 + g 74 -2.8 -5.03994 | gap 1, opp_overlap 1632028 1632032 ATGCCGTGACCTAAA CG-CACGAA GGC TTCGAGGCG TTTTTCTATATCGGG TERM 1849 1632384 - 1632372 - G 73 -7.7 -4.0828 | opp_overlap 1632371, overlap 1632374 ACGCAAAATATCAAA CACCA CAT TGGTG ATATGGTGGGCGTTG TERM 1850 1632673 - 1632685 + g 87 -5.5 -5.40474 | TACAGTTGATATAGC GTGCT TTT GGCAC TTTTTTTGAGACGAT Shew185_1359 1634371 - 1632815 - | diguanylate cyclase TERM 1851 1633519 - 1633541 + g 73 -9.8 -3.26947 | CATCGATAATGATTT CACCGGCGTT ATC GACGCGGGTG TTGATCTCACGATTC TERM 1852 1633982 - 1633996 + g 77 -4.3 -5.15117 | AGCCAGATCTTGTTT GAAGT AATTG ACTTC TTTTTTGAGCTTTTC Shew185_1360 1636685 - 1634523 - | TPR repeat-containing protein TERM 1853 1638573 - 1638560 - g 83 -6.7 -4.946 | opp_overlap 1638560 1638572 ACTAAACAGCAAAAA GCCTT CTTC AAGGC TTGGTTAGGCATTGA Shew185_1361 1636820 - 1638637 + | peptidase M61 domain-containing protein TERM 1854 1638752 - 1638721 - T 73 -7.3 -4.10953 | opp_overlap 1638707 1638722, overlap 1638717 1638723 AGTGACTAAATCAAA TAGCATTCGGCTT GTGATT AAGCCGAATGCGT TAACTTTAGGCGCTT TERM 1855 1638722 - 1638751 + T 85 -11.5 -3.27704 | opp_overlap 1638717 1638721 1638723, overlap 1638707 GTGACTAAATCAAAT AGCATTCGGCTTG TGAT TAAGCCGAATGCG TTAACTTTAGGCGCT TERM 1856 1638750 - 1638723 - T 100 -14.3 -3.64541 | opp_overlap 1638722 1638707, overlap 1638717 1638721 TGACTAAATCAAATA GCATTCGGCTT GTGATT AAGCCGAATGC GTTAACTTTAGGCGC TERM 1857 1638776 - 1638817 + T 80 -10.4 -3.76634 | gap 1, opp_overlap 1638783, overlap 1638778 1638783 GGCGCTTAATTGTCA TAA-AAAAGGCGCACTCTC ATTTA GAAGGTGCGCCTTTTGTTA TTCTGTATTTCAACT TERM 1858 1638778 - 1638814 + T 86 -10.2 -4.00323 | opp_overlap 1638783, overlap 1638776 1638783 CGCTTAATTGTCATA AAAAAGGCGCACTCTC ATTTA GAAGGTGCGCCTTTTG TTATTCTGTATTTCA TERM 1859 1638783 - 1638809 + T 93 -10.1 -4.97957 | opp_overlap 1638783, overlap 1638778 1638776 AATTGTCATAAAAAA GGCGCACTCTC ATTTA GAAGGTGCGCC TTTTGTTATTCTGTA TERM 1860 1638809 - 1638783 - T 100 -10.1 -5.25803 | opp_overlap 1638783 1638778 1638776 AATTGTCATAAAAAA GGCGCACTCTC ATTTA GAAGGTGCGCC TTTTGTTATTCTGTA Shew185_1362 1639805 - 1638891 - | recombination associated protein Shew185_1363 1640097 - 1641041 + | porin TERM 1861 1641065 - 1641081 + F 100 -12.3 -5.5353 | opp_overlap 1641065 TTAAGATTCAATTAA GGAGGCA TAT TGCCTCC TTTTTTATTGCTATA TERM 1862 1641081 - 1641065 - f 87 -12.3 -3.406 | opp_overlap 1641065 TTAAGATTCAATTAA GGAGGCA TAT TGCCTCC TTTTTTATTGCTATA TERM 1863 1641852 - 1641892 + G 71 -8.4 -3.67102 | gap 2, opp_overlap 1641851, overlap 1641853 AAAGCCGTTGAAGAG TCTG-GTCACG-ACCGCTTG ATC CAAACGGTTCGTGGCGCAGG TTATCGTTTCTCTAC Shew185_1364 1641228 - 1641917 + | two component transcriptional regulator TERM 1864 1641935 - 1641964 + F 80 -11.5 -2.90309 | overlap 1641933 1641930 CCGAATAAGTGTTAG GCACAAGTTAGCT TTTA GGCTATCTTGTGC TCCTCTTATTTAGCC TERM 1865 1642209 - 1642184 - g 77 -6.7 -4.52589 | TGGCGCGATAGAAAA CTCACGCCGCC GCAG GGCAGTGGGAG TTGGGAAGGGGTGTT Shew185_1365 1641998 - 1643296 + | PAS/PAC sensor signal transduction histidine kinase TERM 1866 1643356 - 1643328 - f 100 -13.3 -3.81414 | opp_overlap 1643328 1643334, overlap 1643334 ATTCGCAATTAATAA TAAAAACAGGCCA TTA TGGCCTGTTTTTG TTTCTAGGTTCAGAG TERM 1867 1643328 - 1643356 + F 100 -15.5 -3.97368 | opp_overlap 1643328 1643334, overlap 1643334 ATTCGCAATTAATAA TAAAAACAGGCCA TTA TGGCCTGTTTTTG TTTCTAGGTTCAGAG TERM 1868 1643334 - 1643350 + F 100 -12.3 -5.38958 | opp_overlap 1643328 1643334, overlap 1643328 AATTAATAATAAAAA CAGGCCA TTA TGGCCTG TTTTTGTTTCTAGGT TERM 1869 1643350 - 1643334 - f 100 -12.3 -5.3321 | opp_overlap 1643334 1643328, overlap 1643328 AATTAATAATAAAAA CAGGCCA TTA TGGCCTG TTTTTGTTTCTAGGT TERM 1870 1643410 - 1643397 - f 76 -2.3 -5.38047 | opp_overlap 1643397 TAGTGACAGAAAAAA GCGAT AAAT AACGC ATTGTCATCTAAGTG Shew185_1366 1643525 - 1644496 + | phosphate binding protein TERM 1871 1644535 - 1644518 - f 85 -11.3 -3.39895 | opp_overlap 1644518 CGGCTTATTAATCAA GGACCTC CTCG GAGGTCC TTTTTTGTTTCTGGG TERM 1872 1644518 - 1644535 + F 100 -11.3 -5.72622 | opp_overlap 1644518 CGGCTTATTAATCAA GGACCTC CTCG GAGGTCC TTTTTTGTTTCTGGG TERM 1873 1644634 - 1644617 - f 100 -9.9 -5.68039 | opp_overlap 1644615 AAAGGCATAAAAAAA GCAACCT AAAT AGGTTGC TGTAAATTCCAATTC TERM 1874 1644772 - 1644797 + F 79 -3.5 -5.42605 | gap 1, opp_overlap 1644779 TTAGTTCAGAGAAAG TGCGAAA-TATT TTA AATAATTTTGCA TTTTGTTTTTATTAA TERM 1875 1645379 - 1645391 + G 80 -9.1 -4.18018 | overlap 1645387 TTAGTGGTGGATTTT GACGC GCA GCGTC TTTTCGGTAAAGCGA TERM 1876 1645515 - 1645530 + G 77 -4 -5.14563 | gap 1, overlap 1645515 1645516 CAGATAGCGTCAATG C-CACTG ATA CAGTGAG TTTTTTAATAGAAGC Shew185_1367 1645250 - 1647121 + | leukotriene A4 hydrolase TERM 1877 1647194 - 1647176 - T 100 -13.2 -5.81412 | TTTAGGCAAAAAAAA TGGCAACC TAA GGTTGCCA CAAGGAAATCAGTGC TERM 1878 1647638 - 1647620 - T 100 -13.2 -5.95166 | TTTAAGCAAAAAAAA TGGCAACC TAA GGTTGCCA CAAGGAAATCAGTGC TERM 1879 1648002 - 1647985 - T 100 -11.3 -5.61596 | opp_overlap 1647996, overlap 1647969 ATTGGGATAAAAAAA GGCAACC CAAT GGTTGCC TAGTGACCTATTCCT Shew185_1368 1648680 - 1648183 - | glutathione peroxidase TERM 1880 1649446 - 1649486 + G 80 -9 -4.15044 | GAATTATTGATTTCA CTCTTGTCCGAGGATAGC CGTGC GTTATCCGCTGACACGAG TTTATTGGAAGCGGC TERM 1881 1649637 - 1649618 - g 78 -12.2 -2.56432 | overlap 1649617 GTGAACATTATGAAG CGCAGTTG ATGG CAACTGCG GGTATGGATGAGTCC Shew185_1369 1648819 - 1650189 + | magnesium transporter Shew185_1370 1650330 - 1650833 + | GCN5-related N-acetyltransferase TERM 1882 1651426 - 1651439 + G 85 -8.1 -4.74767 | TGCAATACCGCGTAA CGCCA AACA TGGCG TTTTATGTTGGTTAT Shew185_1371 1650999 - 1651538 + | YfaZ family protein TERM 1883 1651580 - 1651619 + T 83 -7.3 -4.68645 | gap 2, opp_overlap 1651586 1651588, overlap 1651588 TAACTTAGCAGTCGA TGTAAAGAGCCGGCCGAGG TCAA CTTCG-CCGGCT-TTTCCA TTTTGCTTTTAGCTC TERM 1884 1651588 - 1651612 + T 90 -10 -4.4518 | gap 1, opp_overlap 1651586 1651588, overlap 1651580 CAGTCGATGTAAAGA GCCGGCCGAGG TCAA CTTCG-CCGGC TTTTCCATTTTGCTT Shew185_1372 1652450 - 1651599 - | hypothetical protein TERM 1885 1652229 - 1652219 - G 70 -2.4 -4.98255 | TGGCAAGCATAAAAA TGGC ATT GCCG AGTCCAATCAATAGG Shew185_1373 1652697 - 1654370 + | diguanylate cyclase TERM 1886 1654478 - 1654427 - T 100 -19.9 -5.01546 | gap 1, opp_overlap 1654442, overlap 1654430 1654442 AAAGCTAGACAAAAA TTAGGTAAAACAAAACGGCGCAGA TAAAT TCTGCGCCGTTTT-TTTTACCTTA AGCTGAGTGTTATCC TERM 1887 1654475 - 1654430 - T 100 -21.6 -3.35962 | gap 1, opp_overlap 1654442, overlap 1654427 1654442 GCTAGACAAAAATTA GGTAAAACAAAACGGCGCAGA TAAAT TCTGCGCCGTTTT-TTTTACC TTAAGCTGAGTGTTA TERM 1888 1654464 - 1654442 - T 100 -14.9 -5.10933 | opp_overlap 1654442, overlap 1654430 1654427 TTAGGTAAAACAAAA CGGCGCAGA TAAAT TCTGCGCCG TTTTTTTTACCTTAA TERM 1889 1654442 - 1654464 + T 100 -14.9 -5.86332 | opp_overlap 1654442 1654430 1654427 TTAGGTAAAACAAAA CGGCGCAGA TAAAT TCTGCGCCG TTTTTTTTACCTTAA Shew185_1374 1657635 - 1654513 - | hypothetical protein TERM 1890 1654854 - 1654872 + g 70 -8.1 -3.80893 | GGATTTCGGTATTGA GCTGGTG GATAG CACCGGC TTTAGCTTCTAAGGT TERM 1891 1654872 - 1654886 + g 73 -5 -4.79752 | GGTGGATAGCACCGG CTTTAG CTT CTAAGG TTTTATGTTGTTGGA TERM 1892 1657796 - 1657780 - R 73 -9.5 -3.23042 | opp_overlap 1657770 1657780, overlap 1657769 AAGATTGAGTAGCAA GTTGGAT GTT ATCCAAC TTGCTCAGATTTGGC TERM 1893 1657780 - 1657796 + r 73 -9.5 -3.2048 | opp_overlap 1657780 1657769, overlap 1657770 AAGATTGAGTAGCAA GTTGGAT GTT ATCCAAC TTGCTCAGATTTGGC Shew185_1375 1658153 - 1657872 - | hypothetical protein TERM 1894 1657945 - 1657958 + g 77 -3.1 -5.25976 | gap 1, overlap 1657939 1657944 TTAGTATCCCTGCGG CGCTGT TTC AC-GCG TTTATTTTTTTGCTT TERM 1895 1658295 - 1658268 - R 72 -9.9 -3.07113 | opp_overlap 1658268 GATTATGCGATTGAA CTTGGCGCC TAGAAAGGAG GGCGCCAAG TTTTGATACAAAATA TERM 1896 1658268 - 1658295 + r 90 -10.6 -4.2558 | opp_overlap 1658268 GATTATGCGATTGAA CTTGGCGCCT AGAAAGGA GGGCGCCAAG TTTTGATACAAAATA Shew185_1376 1659683 - 1658322 - | Fmu (Sun) domain-containing protein TERM 1897 1658743 - 1658759 + g 70 -7.9 -3.81929 | opp_overlap 1658743, overlap 1658744 CTAATGCCGTTAAAG TGCGCTC TTT GGGCGCG TTTAGTGAGTTCTTC TERM 1898 1659833 - 1659860 + r 79 -5.7 -4.98857 | gap 2, opp_overlap 1659833 ACAGGCAGTAAAAAA GCCCCGAATTAGC ATCA GCTAAT--GGGGC TTTTTGTGGTTGAGT TERM 1899 1659860 - 1659833 - R 81 -5.7 -5.17353 | gap 2, opp_overlap 1659833 ACAGGCAGTAAAAAA GCCCCGAATTAGC ATCA GCTAAT--GGGGC TTTTTGTGGTTGAGT Shew185_1377 1660619 - 1659951 - | glutathione S-transferase domain-containing protein TERM 1900 1660015 - 1660028 + g 71 -4.5 -4.56597 | opp_overlap 1660025 ATTTCCACCGGTGGC GGCGT AACT ATGCC TTTTTGGCAAGCAGG Shew185_1378 1661312 - 1660686 - | glutathione S-transferase domain-containing protein Shew185_1379 1661525 - 1662115 + | TetR family transcriptional regulator TERM 1901 1662182 - 1662205 + T 100 -11.8 -4.67038 | AAGTTGCTGTTTTAA TGGCCTAGAT TTTT GTCTAGGCCA TTTTGCTTTTAGCAA Shew185_1380 1662985 - 1662272 - | hypothetical protein Shew185_1381 1663323 - 1665542 + | TonB-dependent heme/hemoglobin receptor family protein Shew185_1382 1665677 - 1666240 + | PhnA protein TERM 1902 1666297 - 1666324 + T 100 -12.1 -6.09196 | gap 1, opp_overlap 1666297 CGCACACCATAAAAA CCGCCATGCTCG TTAAT CGA-CATGGCGG TTTTTTTATTTTGAA TERM 1903 1666324 - 1666297 - T 100 -12.1 -4.95155 | gap 1, opp_overlap 1666297 CGCACACCATAAAAA CCGCCATGCTCG TTAAT CGA-CATGGCGG TTTTTTTATTTTGAA Shew185_1383 1667553 - 1666348 - | major facilitator transporter Shew185_1384 1667784 - 1668380 + | MarR family transcriptional regulator Shew185_1385 1668544 - 1669557 + | succinylglutamate desuccinylase/aspartoacylase TERM 1904 1669585 - 1669627 + T 74 -4.9 -4.71382 | gap 1, opp_overlap 1669586 1669595, overlap 1669586 1669586 1669595 TGAAATTGGATATAC AG-CCACAGAAGTCGCTAAG ATAG TTTTGCGACTTCTGTGAACA TTTTTAAGTGCTTAT TERM 1905 1669625 - 1669586 - T 75 -10.1 -3.01708 | opp_overlap 1669586 1669585 1669586 1669595, overlap 1669595 GAAATTGGATATACA GCCACAGAAGTCGCTAA GATAGT TTTGCGACTTCTGTGAA CATTTTTAAGTGCTT TERM 1906 1669586 - 1669626 + T 70 -8.4 -3.41745 | gap 1, opp_overlap 1669586 1669595, overlap 1669586 1669585 1669595 GAAATTGGATATACA G-CCACAGAAGTCGCTAAG ATAG TTTTGCGACTTCTGTGAAC ATTTTTAAGTGCTTA TERM 1907 1669727 - 1669706 - T 71 -6.7 -4.12188 | TTATCACTGCCAAAA TCTAAACTC ACTA GAGTTTAAA GCGTTCCACTGAGCT Shew185_1386 1671743 - 1669716 - | methyl-accepting chemotaxis sensory transducer Shew185_1387 1671952 - 1672578 + | fumarylacetoacetate (FAA) hydrolase Shew185_1388 1672602 - 1673213 + | cyclic nucleotide-binding protein Shew185_1389 1673352 - 1673861 + | hypothetical protein Shew185_1390 1674214 - 1673972 - | hypothetical protein TERM 1908 1674271 - 1674261 - H 73 -5.4 -4.59109 | GATATGGCTTAAAAA TGAG CAA CTCA CGACGCTGTCAATCG Shew185_1391 1674470 - 1674751 + | hypothetical protein TERM 1909 1674980 - 1675001 + G 88 -8.7 -4.70659 | opp_overlap 1674980 GCGCATTTCGAACAA GCCGGCTTA GTGG TAAGGCGGC TTTTTGAGTCTGAAA TERM 1910 1675001 - 1674980 - g 71 -8.7 -3.63515 | opp_overlap 1674980 GCGCATTTCGAACAA GCCGGCTTA GTGG TAAGGCGGC TTTTTGAGTCTGAAA Shew185_1392 1674797 - 1675228 + | ferric uptake regulator family protein TERM 1911 1675724 - 1675744 + G 76 -7.5 -4.39696 | CATAAACCTAAGCAT GCCACTGTC GTC GGTGGTGGC TTTATTGGTTTAGAG Shew185_1393 1675265 - 1676545 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Shew185_1394 1676566 - 1676976 + | rhodanese domain-containing protein TERM 1912 1677092 - 1677067 - g 93 -11.9 -4.4572 | AAGATTGTAAACAAA GCCACAGCCAA TGCC TTGTCTGTGGC GACGCGACTCAAAAC Shew185_1395 1677039 - 1677467 + | thioesterase superfamily protein TERM 1913 1677614 - 1677641 + T 100 -14.2 -3.32844 | overlap 1677615 AGTTGGGCGTTAACG CGTCGGCCATCA CATG TGATGGCCGACA TTGTGCGATGAACGA TERM 1914 1677615 - 1677640 + T 100 -17.7 -2.59564 | overlap 1677614 GTTGGGCGTTAACGC GTCGGCCATCA CATG TGATGGCCGAC ATTGTGCGATGAACG Shew185_1396 1680398 - 1677657 - | Beta-N-acetylhexosaminidase TERM 1915 1677864 - 1677881 + g 71 -6.9 -4.30978 | CCCAGGTGGTGCTAT GCGGTAG AAAA CTCCCGC TTTTGCTAACTTAGG Shew185_1397 1681237 - 1680395 - | ROK family protein Shew185_1398 1682532 - 1681234 - | major facilitator transporter TERM 1916 1682165 - 1682149 - G 71 -2.9 -4.88736 | CAGTACGGAGAAAAA GGCAAAA TGC TCTGGCC CCGCGGCTTGGCGCA TERM 1917 1684013 - 1684003 - g 71 -8.2 -3.76952 | opp_overlap 1684004, overlap 1684004 TTTATTCAATTTAAA GGCG TCA CGCC GAGTCGCTTTCGTCA Shew185_1399 1683085 - 1684059 + | helix-turn-helix domain-containing protein Shew185_1400 1685580 - 1684069 - | tryptophan halogenase TERM 1918 1685613 - 1685630 + r 83 -12.7 -2.8655 | opp_overlap 1685613 TTATCAACGCAAAAA GCCGACC CTAA GGTCGGC TATGGTGTGACTCAA TERM 1919 1685630 - 1685613 - R 100 -12.7 -4.7629 | opp_overlap 1685613 TTATCAACGCAAAAA GCCGACC CTAA GGTCGGC TATGGTGTGACTCAA Shew185_1401 1688284 - 1685648 - | TonB-dependent receptor plug TERM 1920 1687303 - 1687313 + g 71 -8.2 -3.69283 | opp_overlap 1687265 1687264 TTGCCGACGCTGTGC CGCC TTG GGCG TTATTCACTACGTTG TERM 1921 1688032 - 1688042 + g 75 -5.4 -4.82901 | opp_overlap 1688020 AAATTCGCTGCAGCG CATC ACC GATG TTTTTATCGGGAAAC Shew185_1402 1688629 - 1689756 + | polysaccharide deacetylase TERM 1922 1689765 - 1689788 + F 95 -13.2 -3.65991 | overlap 1689757 1689769 1689771 1689773 GAAGTAGCTAAGTCT TGGGCTGAGT ATTT ACTCGGCCCA TTATATTGGCCGAGT TERM 1923 1689955 - 1689941 - f 70 -9.2 -3.17598 | overlap 1689938 1689939 AGTGTTAGAAAAGCA GCGCAC AAA GCGCGC GATTGGGGAGAGAAA Shew185_1403 1689971 - 1690756 + | hypothetical protein TERM 1924 1690843 - 1690863 + F 86 -11.9 -3.33492 | overlap 1690845 TCGTTCCGTGTGTGA TGCTTGCCG CAG CGGCAAGTA TTCTCGGGTAGATAG TERM 1925 1690845 - 1690861 + F 85 -12.3 -3.23572 | overlap 1690843 GTTCCGTGTGTGATG CTTGCCG CAG CGGCAAG TATTCTCGGGTAGAT Shew185_1404 1690911 - 1691333 + | hypothetical protein TERM 1926 1691540 - 1691567 + T 84 -10 -3.88641 | opp_overlap 1691547, overlap 1691547 TGACATAATGGACAT AAAAAAACCAGC CTAG GCTGGTTTTTTG TTATTACTCTTTCTT TERM 1927 1691560 - 1691547 - T 100 -8.1 -5.72616 | opp_overlap 1691540 1691547 ATGGACATAAAAAAA CCAGC CTAG GCTGG TTTTTTGTTATTACT TERM 1928 1691547 - 1691560 + T 100 -8.1 -5.66229 | opp_overlap 1691547, overlap 1691540 ATGGACATAAAAAAA CCAGC CTAG GCTGG TTTTTTGTTATTACT Shew185_1405 1692245 - 1691691 - | transport-associated protein TERM 1929 1692459 - 1692442 - R 100 -8.4 -5.69473 | opp_overlap 1692442 TAGAGCATAAAAAAA CCGCAC GAATAA GTGCGG TTGAGTGTGTAAGGT Shew185_1406 1693006 - 1692551 - | hypothetical protein TERM 1930 1692983 - 1692952 - G 76 -11.1 -3.17212 | opp_overlap 1692952 1692978, overlap 1692957 1692978 TTATTATTTCATCAA TCAAACTGATATC GGCGCG GATATCAGTCTGA TGTTGCACAACATTA Shew185_1407 1693255 - 1694625 + | sigma-54 dependent trancsriptional regulator Shew185_1408 1694733 - 1694921 + | hypothetical protein Shew185_1409 1694970 - 1695809 + | hypothetical protein TERM 1931 1695817 - 1695838 + F 100 -13.1 -4.42639 | opp_overlap 1695810 1695813 GTCAATAACACCTTA GCTGCAACT GCAA AGTTGCAGC TTTTCGTTACACTAT TERM 1932 1696630 - 1696648 + G 71 -4.5 -4.63863 | GAATTTAATTTTATG CGAGTGC TTATT GCGCTTG TTGTTTTTATCTTAA Shew185_1410 1696036 - 1696692 + | hypothetical protein Shew185_1411 1698391 - 1696685 - | hypothetical protein TERM 1933 1697499 - 1697515 + g 85 -5.8 -5.00884 | gap 1, overlap 1697502 GCAATAATGATATCG GCGCCGC TATT GCGG-GC TTTTTTGGCGAAGGT TERM 1934 1698081 - 1698071 - G 74 -6.8 -4.31397 | ATCCGCAGAAAATAA TCGG CAG CCGA GATACAACTGCTCAT TERM 1935 1698204 - 1698218 + g 70 -7.8 -3.88291 | opp_overlap 1698202 1698199 ATATACCAAGGGATA GTGCCA TCT TGGCGC TTTCTAAAAATGCTG TERM 1936 1698543 - 1698514 - R 100 -15.1 -4.27316 | opp_overlap 1698507 1698506 GGTGCTAACTCAAAA GGGTGGCAGTAGA CGAG TCTATTGCCACCC TAAAATGAGGTTTGT Shew185_1412 1698753 - 1698559 - | hypothetical protein Shew185_1413 1698954 - 1698778 - | hypothetical protein TERM 1937 1699227 - 1699205 - R 100 -9.9 -5.34555 | opp_overlap 1699205 GCACAGCATAAAAAA GCCGATACC ATTTG AGTATCGGC TTAGATGAAGACGTC Shew185_1414 1699772 - 1699344 - | XRE family transcriptional regulator Shew185_1415 1700254 - 1699940 - | hypothetical protein TERM 1938 1700838 - 1700798 - R 73 -8.5 -3.68569 | gap 1, opp_overlap 1700803 1700805 1700809, overlap 1700801 CGAGGTAGTGAAGAA GACTGCATCAAGCAGGGA GTTGAG TCCCTACTTGATGTA-TC TATGTCCCGTAGTGC TERM 1939 1700836 - 1700801 - R 79 -11.3 -2.64872 | opp_overlap 1700803 1700805 1700809, overlap 1700798 GGTAGTGAAGAAGAC TGCATCAAGCAGGGA GTTGAG TCCCTACTTGATGTA TCTATGTCCCGTAGT TERM 1940 1700803 - 1700834 + r 82 -11.7 -3.05498 | opp_overlap 1700801 1700798, overlap 1700805 1700809 TAGTGAAGAAGACTG CATCAAGCAGGGA GTTGAG TCCCTACTTGATG TATCTATGTCCCGTA Shew185_1416 1702500 - 1700854 - | PfaD family protein TERM 1941 1701249 - 1701259 + g 77 -6.8 -4.63527 | ATGAGCGGAACACTT GCTC TTC GAGC TTTTTACGCTCGTCC TERM 1942 1701803 - 1701827 + g 71 -4.9 -4.63184 | GCTGGCTCCATAAAC TTAGTCGCGAC TTC GGTGCGGCTGA TTTTTGCGATGACTT TERM 1943 1701979 - 1701967 - G 71 -4.8 -4.58395 | opp_overlap 1701967, overlap 1701969 TTTATGTTTTAAAAA CAGC TCAAC GCTG CCGCGCTCTAATGCG TERM 1944 1702439 - 1702455 + g 81 -5.7 -5.00339 | overlap 1702441 GCATCGTTGACTTGC CACGGCC AAG GGCTGAG TTTTTCGTTATTACT Shew185_1417 1708616 - 1702620 - | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ TERM 1945 1703495 - 1703517 + g 71 -2.6 -4.93296 | opp_overlap 1703496 1703497, overlap 1703497 CCATCAGCACAGAAT AGGGCATCAC GGC GTGATGGCTG TTTTTATCGTAATAC TERM 1946 1703497 - 1703515 + g 71 -7.4 -4.08644 | opp_overlap 1703497 1703496, overlap 1703495 ATCAGCACAGAATAG GGCATCAC GGC GTGATGGC TGTTTTTATCGTAAT TERM 1947 1703910 - 1703925 + g 73 -4.6 -4.8083 | opp_overlap 1703904 TTTTGAAACCAGCGT TGCAGC CGAA GCAGCA TTTTTAGTCGTATTA TERM 1948 1707867 - 1707896 + g 71 -8.6 -3.6682 | AAGCATCATATCGGC CTTGCCTGTGGT CAGGTA ATCGCAGGCGAG TTTAAGTGCGTAAAC TERM 1949 1707998 - 1708014 + g 76 -9.3 -3.85704 | AGGCTGTGTGGGCAA CGGCGCC ATT GGCGACG TTTAATACTTGCTCG TERM 1950 1708386 - 1708372 - G 71 -4.2 -4.82667 | overlap 1708373 TTATCACAGTAAAAA CGGTCA GAC TGACCC TGTACACCTTGGTAA Shew185_1418 1710886 - 1708613 - | PfaB family protein TERM 1951 1710286 - 1710265 - G 73 -10.1 -3.15861 | opp_overlap 1710267 CAGTAGTGTCATGAA GCGGCGC TTGTGTTC GCGCCGC GAGGGCTGTTACGCC TERM 1952 1710768 - 1710804 + g 78 -8.1 -4.4017 | gap 2, opp_overlap 1710757 1710779, overlap 1710769 TCAAGGTTGACGGCA TCGCCAAGCAACACTGC AATAC GCAGTG--GCTTGGCGC TTTTGTCAGCATTAG TERM 1953 1710769 - 1710803 + g 79 -11.6 -3.2362 | gap 2, opp_overlap 1710757 1710779, overlap 1710768 CAAGGTTGACGGCAT CGCCAAGCAACACTGC AATAC GCAGTG--GCTTGGCG CTTTTGTCAGCATTA Shew185_1419 1718994 - 1710883 - | erythronolide synthase TERM 1954 1711816 - 1711835 + g 70 -7.8 -3.86252 | CTTAGGGTCCAGTGT GCGCTGCA GTTT TACAGCGC TTATATTTACTGCGC TERM 1955 1712631 - 1712650 + g 71 -5 -4.48792 | gap 1, overlap 1712628 GAATGTGGGCAATGG CAGCG-GCT TTA AGTTCGCTG TTATTTTTACCTTGT TERM 1956 1713569 - 1713592 + g 73 -2.5 -5.03314 | gap 2 TGTGGCGATAGTTGC GTTAGCTCAGC CGCC GCTG-GC-AAC TTTTTTAGCACTACC TERM 1957 1715902 - 1715915 + g 77 -3.9 -5.11937 | TTTTTCGACGATGAC TTGTT TCTC AACAA TTTTTTCGACTTCTT TERM 1958 1716941 - 1716953 + g 77 -10.5 -3.53012 | opp_overlap 1716940 1716939 TGCGCCATTGAAACC GCGCC TAT GGCGC TTTGGGCGAACAGGG Shew185_1420 1719860 - 1718991 - | transcriptional regulator, putative TERM 1959 1719159 - 1719135 - G 71 -7.2 -4.05788 | gap 1, overlap 1719136 CTTTCGTAAATGAAA CGGCCCATGTC GGAG GACATAGGC-G ATATATCTATTGGTC TERM 1960 1720735 - 1720750 + G 71 -6.8 -4.2349 | GCTATGCGGATTTAT CGCCAC ACGA GTGGTG TTTTGAATATGGCGC TERM 1961 1720983 - 1721015 + G 74 -4.1 -4.84529 | gap 1, opp_overlap 1720969, overlap 1720982 ACCGCGGCCTTGCTC GCTCTCGCCGATGA AGCAAG TCAGCGGC-AGCGC TTTTTCGATTTATGG Shew185_1421 1720422 - 1721408 + | 4'-phosphopantetheinyl transferase TERM 1962 1722243 - 1722227 - g 90 -9.3 -4.56775 | opp_overlap 1722227, overlap 1722229 AGCTTGCTGCAAAAA GGCGCCG ATG CGGCGGC CTATGCTAAAAGCCT Shew185_1422 1721867 - 1722418 + | putative lipoprotein TERM 1963 1722549 - 1722532 - T 100 -11.3 -5.60993 | opp_overlap 1722532 1722531 TTTCCCATAAAAAAA GCCCTGA AGCT TCAGGGC GTTGATGTCATTATT TERM 1964 1722532 - 1722549 + T 79 -11.3 -2.60382 | opp_overlap 1722532, overlap 1722531 TTTCCCATAAAAAAA GCCCTGA AGCT TCAGGGC GTTGATGTCATTATT Shew185_1423 1724548 - 1722560 - | beta-lactamase domain-containing protein Shew185_1424 1724672 - 1725613 + | LysR family transcriptional regulator TERM 1965 1725628 - 1725591 - T 86 -4.3 -5.37593 | gap 2, opp_overlap 1725591 CTGTAAATGAAAAAA CTCTGAATCTTGCTAGC AGCTAG GCGAGC--GATTCAGAG CTTAGTTTCGGTTTT Shew185_1425 1726597 - 1725707 - | 7-cyano-7-deazaguanine reductase Shew185_1426 1726624 - 1727274 + | SecY interacting protein Syd TERM 1966 1727349 - 1727390 + T 100 -14.5 -3.99494 | opp_overlap 1727355, overlap 1727350 GAGTGTGAACGCTCT ACCACACTGAGTTTGAGCG TGAA CGCTCAAACTCAGCATGGC TTATTCTTCGGTTGA TERM 1967 1727350 - 1727389 + T 100 -18 -2.98973 | opp_overlap 1727355, overlap 1727349 AGTGTGAACGCTCTA CCACACTGAGTTTGAGCG TGAA CGCTCAAACTCAGCATGG CTTATTCTTCGGTTG TERM 1968 1727384 - 1727355 - T 100 -19.5 -2.79133 | opp_overlap 1727350 1727349 GAACGCTCTACCACA CTGAGTTTGAGCG TGAA CGCTCAAACTCAG CATGGCTTATTCTTC Shew185_1427 1728203 - 1727430 - | hypothetical protein TERM 1969 1727535 - 1727552 + g 81 -6.2 -4.84359 | opp_overlap 1727535 ATCATGACTACCACA GCGTGG ACAAGG CCGCGC TTTTTCTGAGGCTAA TERM 1970 1727708 - 1727722 + g 70 -7.8 -3.93695 | CGGCAAATTCTGCTT TGGTGG CCG CCGCCA TTTGTAACTCGTCAC Shew185_1428 1728586 - 1728203 - | hypothetical protein Shew185_1429 1728753 - 1729160 + | hypothetical protein Shew185_1430 1729407 - 1729171 - | hypothetical protein TERM 1971 1729575 - 1729589 + G 73 -10 -3.34398 | opp_overlap 1729577, overlap 1729573 AATGAAACCTTGGAA GACTGC CGT GCAGTC TATTTGACCGCGGAA Shew185_1431 1729554 - 1730201 + | GCN5-related N-acetyltransferase Shew185_1432 1730185 - 1730490 + | hypothetical protein TERM 1972 1730503 - 1730468 - T 91 -13.6 -2.62184 | gap 1 TGTTTGCTCAGATGA TCAG-CGGCTTTTTTAA GCG TTAAAAAAGCCGTCCGA GTGAGATGCCCATGC TERM 1973 1730962 - 1730942 - T 70 -8.3 -3.29364 | AGGATTAAGCATGAA CTCGAGACA GGA TGTGTCGAG ACAAGGATAAAGTAT TERM 1974 1731219 - 1731239 + T 93 -9.7 -5.00851 | opp_overlap 1731218 1731217 TACAAAGGATAAATG GGGCGCA CTTTAGT TGCGCCC TTTTCTTTGGTTCAT TERM 1975 1732072 - 1732102 + T 100 -9.7 -6.23317 | gap 1, opp_overlap 1732072 1732075, overlap 1732075 GCTTAACAGAGAATA G-GAGGGCGTGGCT TTAG GGCCGCGCCCTTTC TTTTTTTATTTTTAT TERM 1976 1732075 - 1732098 + T 100 -13.8 -5.36181 | opp_overlap 1732072 1732075, overlap 1732072 TAACAGAGAATAGGA GGGCGTGGCT TTAG GGCCGCGCCC TTTCTTTTTTTATTT TERM 1977 1732098 - 1732075 - T 77 -10.9 -2.85779 | opp_overlap 1732075 1732072, overlap 1732072 TAACAGAGAATAGGA GGGCGTGGC TTTAGG GCCGCGCCC TTTCTTTTTTTATTT Shew185_1433 1732589 - 1732203 - | hypothetical protein Shew185_1434 1733599 - 1732586 - | hypothetical protein Shew185_1435 1733732 - 1734082 + | hypothetical protein Shew185_1436 1734069 - 1734932 + | pseudouridine synthase TERM 1978 1734991 - 1735025 + T 89 -12.2 -3.53444 | opp_overlap 1734981, overlap 1734988 CATAATTGGCCGTCA GCCAAGTGAGTGGCAT CAA AAGTCATTCGCTTGGC TTGGTTATTGACACG Shew185_1437 1735353 - 1735159 - | hypothetical protein Shew185_1438 1735475 - 1735939 + | flavodoxin TERM 1979 1735974 - 1735996 + GF 73 -7.7 -3.82084 | overlap 1735975 1735977 GTGGTTTAAATTTGC CCAGCGCTT AAGCC AAGCGCTGC TTATTCCTATTGCCA TERM 1980 1735975 - 1735995 + GF 80 -11.2 -2.88768 | overlap 1735974 1735977 TGGTTTAAATTTGCC CAGCGCTT AAGCC AAGCGCTG CTTATTCCTATTGCC TERM 1981 1736180 - 1736194 + GF 72 -8.5 -3.5891 | opp_overlap 1736173, overlap 1736162 1736178 GCGATCAAGGCATTG CCGCC TTTAC GGCGG TGTTTGGTTATGGGG Shew185_1439 1735891 - 1737378 + | PTS system, glucose-like IIB subunint TERM 1982 1738209 - 1738220 + G 72 -5.8 -4.44915 | overlap 1738208 GGTGAAAATTATCGG TGCG ACGG CGCA TTTTGTGAATAATTG Shew185_1440 1737544 - 1738410 + | formyltetrahydrofolate deformylase TERM 1983 1739334 - 1739346 + G 78 -5.5 -4.86731 | CTTGCAGGGCGTTAT TTGGC GGT GCCGA TTTTGTTTCGCAGCC TERM 1984 1739763 - 1739745 - g 71 -8.2 -3.74251 | CAGATCTTGACCAAA CCTTCGAA GCT TTCGAAAG AAGAATACGCATTAA Shew185_1441 1738602 - 1740533 + | metal dependent phosphohydrolase TERM 1985 1740633 - 1740604 - T 100 -15.3 -3.32536 | opp_overlap 1740611, overlap 1740611 AAATGATGCCGACAA TAAAAAAGATGCC CTCG GGCATCTTTTTTA TGGAACTCATGTTAT TERM 1986 1740626 - 1740611 - T 100 -9 -5.55769 | opp_overlap 1740611, overlap 1740604 GCCGACAATAAAAAA GATGCC CTCG GGCATC TTTTTTATGGAACTC TERM 1987 1740611 - 1740626 + T 93 -9 -5.252 | opp_overlap 1740611 1740604 GCCGACAATAAAAAA GATGCC CTCG GGCATC TTTTTTATGGAACTC Shew185_1442 1741486 - 1740662 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Shew185_1443 1744093 - 1741508 - | PII uridylyl-transferase TERM 1988 1743682 - 1743668 - G 74 -2.8 -5.06414 | TTGGTCGAATAAAAA CTCG GGCCCTT CGAG CAGTCGTGCCTCTAA TERM 1989 1744094 - 1744104 + r 87 -3.2 -5.74684 | CAGAGCTATATTCAT CGAG TCC CTTG TTTTTATTTTTGTTG Shew185_1444 1744933 - 1744127 - | methionine aminopeptidase Shew185_1445 1745241 - 1745969 + | 30S ribosomal protein S2 TERM 1990 1746003 - 1745970 - f 88 -11.3 -3.6968 | gap 1, opp_overlap 1745977, overlap 1745973 1745976 GTAGAAGCCGAATAA TAATAAGGCGCGATGA TTA TCATCAC-CCTTATTA ACCAAGATTTTTGAT TERM 1991 1746000 - 1745973 - f 79 -8.6 -3.97139 | gap 1, opp_overlap 1745977, overlap 1745970 1745976 GAAGCCGAATAATAA TAAGGCGCGATGA TTA TCATCAC-CCTTA TTAACCAAGATTTTT TERM 1992 1746026 - 1746045 + F 100 -15 -4.60797 | opp_overlap 1746028 TTTTTGATTGGTTAA CAGGGGCC ATTC GGCCCCTG TTTTATATCTGCAAA TERM 1993 1746043 - 1746028 - f 82 -11.8 -3.03124 | opp_overlap 1746026 TTTGATTGGTTAACA GGGGCC ATTC GGCCCC TGTTTTATATCTGCA Shew185_1446 1746090 - 1746941 + | elongation factor Ts TERM 1994 1746962 - 1746989 + F 100 -17.8 -3.29144 | opp_overlap 1746958 1746967, overlap 1746965 AACGCTAAATACCCC CAAGACCGCGGC AATA GCTGCGGTCTTG TTATGACCAGGATAA TERM 1995 1746965 - 1746986 + F 95 -13.7 -3.78934 | opp_overlap 1746958 1746967, overlap 1746962 GCTAAATACCCCCAA GACCGCGGC AATA GCTGCGGTC TTGTTATGACCAGGA Shew185_1447 1747010 - 1747747 + | uridylate kinase Shew185_1448 1747769 - 1748326 + | ribosome recycling factor TERM 1996 1748355 - 1748381 + F 100 -13.8 -4.33956 | AAGCTAGAGTTGATG CGCCGTGTAG GGGTATA CTACACGGCG TTTGTCTATTTTAAA Shew185_1449 1748409 - 1749236 + | undecaprenyl diphosphate synthase Shew185_1450 1749257 - 1750114 + | phosphatidate cytidylyltransferase TERM 1997 1750297 - 1750320 + G 73 -7.5 -4.18018 | gap 1, opp_overlap 1750296 ATATGGTGGATGAAG CGGCA-GCAA AACAG TTGCGTGCCG TTTTACCTGCGACGC Shew185_1451 1750128 - 1751309 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1998 1752639 - 1752618 - g 71 -8.7 -3.64049 | GTAATAACTGGTAAA CCTGTACCT GAAA AGGTGCAGG AAATAGGATTCAGAT Shew185_1452 1751349 - 1752719 + | putative membrane-associated zinc metalloprotease Shew185_1453 1752751 - 1755231 + | surface antigen (D15) Shew185_1454 1755296 - 1755793 + | outer membrane chaperone Skp (OmpH) TERM 1999 1755935 - 1755973 + G 85 -11.1 -3.80733 | gap 1, opp_overlap 1755935 1755937 1755938, overlap 1755937 1755938 TTAGCCAACAGTAAA TATCGCTCTCAGCTTGAG GCAA CTCAAGC-GAGTGCGGTG TTATTGTCAGCTAAA TERM 2000 1755971 - 1755937 - g 71 -9.3 -3.55486 | gap 1, opp_overlap 1755935 1755937 1755938, overlap 1755935 1755938 AGCCAACAGTAAATA TCGCTCTCAGCTTGAG GCAA CTCAAGC-GAGTGCGG TGTTATTGTCAGCTA TERM 2001 1755937 - 1755971 + G 83 -11.5 -3.48824 | gap 1, opp_overlap 1755937 1755935 1755938, overlap 1755935 1755938 AGCCAACAGTAAATA TCGCTCTCAGCTTGAG GCAA CTCAAGC-GAGTGCGG TGTTATTGTCAGCTA TERM 2002 1755938 - 1755970 + G 81 -12.8 -2.68813 | gap 1, opp_overlap 1755937 1755935 1755938, overlap 1755937 1755935 GCCAACAGTAAATAT CGCTCTCAGCTTGAG GCAA CTCAAGC-GAGTGCG GTGTTATTGTCAGCT TERM 2003 1755970 - 1755938 - g 81 -12.8 -2.72568 | gap 1, opp_overlap 1755938 1755937 1755935, overlap 1755937 1755935 GCCAACAGTAAATAT CGCTCTCAGCTTGAG GCAA CTCAAGC-GAGTGCG GTGTTATTGTCAGCT Shew185_1455 1755797 - 1756822 + | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Shew185_1456 1756854 - 1757318 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 2004 1757537 - 1757524 - g 73 -2.3 -5.0916 | GTGCCAAGACAAAAA GTACG CTGG CGAAC CCACACGACTGATCA Shew185_1457 1757315 - 1758085 + | UDP-N-acetylglucosamine acyltransferase TERM 2005 1758103 - 1758132 + F 90 -12.3 -3.73068 | opp_overlap 1758105 1758110, overlap 1758105 1758110 TGATGACCACACGAC AACAAAAGGGCAT TTTT ATGCCCTTTTGTA TTATTGGCTTAAGCC TERM 2006 1758130 - 1758105 - f 100 -14.9 -3.48668 | opp_overlap 1758103 1758105 1758110, overlap 1758110 ATGACCACACGACAA CAAAAGGGCAT TTTT ATGCCCTTTTG TATTATTGGCTTAAG TERM 2007 1758105 - 1758130 + F 100 -14.9 -3.44686 | opp_overlap 1758105 1758110, overlap 1758103 1758110 ATGACCACACGACAA CAAAAGGGCAT TTTT ATGCCCTTTTG TATTATTGGCTTAAG TERM 2008 1758125 - 1758110 - f 89 -9 -4.82819 | opp_overlap 1758105 1758103 1758110, overlap 1758105 CACACGACAACAAAA GGGCAT TTTT ATGCCC TTTTGTATTATTGGC TERM 2009 1758110 - 1758125 + F 89 -9 -4.79752 | opp_overlap 1758110 1758105, overlap 1758105 1758103 CACACGACAACAAAA GGGCAT TTTT ATGCCC TTTTGTATTATTGGC Shew185_1458 1758288 - 1759484 + | lipid-A-disaccharide synthase Shew185_1459 1759484 - 1760116 + | ribonuclease H TERM 2010 1760887 - 1760899 + G 75 -7.7 -4.19238 | ATGAAATTCGAGTCG CCATC CAC GATGG TTTTACCCTTGCCGA Shew185_1460 1760235 - 1763708 + | DNA polymerase III subunit alpha TERM 2011 1763797 - 1763808 + G 70 -2.2 -5.00616 | overlap 1763783 TTGCGATCTCAGCGC GCAT ATTA GTGC TTTTTTGACGGCGCA Shew185_1461 1763750 - 1765225 + | tRNA(Ile)-lysidine synthetase Shew185_1462 1766373 - 1765483 - | diguanylate cyclase TERM 2012 1767788 - 1767805 + G 100 -9.1 -5.02074 | TGGTTACGGCCGAGT CGGGCAG ACCA TTGCCCG TTTTTTGAAAACTGA Shew185_1463 1766544 - 1768490 + | potassium efflux system protein TERM 2013 1768538 - 1768556 + T 100 -13.2 -4.9725 | opp_overlap 1768538 ACGCAGATATAAAAA TGCCGACA TAA TGTCGGCA TTTTTGTCTGGAACT TERM 2014 1768556 - 1768538 - T 100 -13.2 -5.04597 | opp_overlap 1768538 ACGCAGATATAAAAA TGCCGACA TAA TGTCGGCA TTTTTGTCTGGAACT Shew185_1464 1768808 - 1768599 - | cold-shock DNA-binding domain-containing protein TERM 2015 1771080 - 1771070 - g 71 -4.6 -4.58283 | GAACTGCGTGAAAAA GCCA AGT CGGC CCTAGGAGATAAGTT Shew185_1465 1769375 - 1771219 + | hypothetical protein TERM 2016 1773830 - 1773842 + G 77 -4.8 -4.86731 | opp_overlap 1773830 CTTAGGTGAACTTAA GTCC TTGAT GGAC TTTTGTTTGCCCGGA Shew185_1466 1771506 - 1774727 + | non-specific serine/threonine protein kinase Shew185_1467 1774774 - 1775538 + | putative hydrolase Shew185_1468 1775545 - 1776690 + | dTDP-4-dehydrorhamnose reductase TERM 2017 1777633 - 1777657 + G 88 -8.6 -4.67943 | opp_overlap 1777632 TGGCGAGCATGACAT CTTAAGCGTG GGTAG CTCGCTTAAG TTTTGTATGTTGGCA Shew185_1469 1777058 - 1777864 + | 3'(2'),5'-bisphosphate nucleotidase TERM 2018 1778400 - 1778425 + G 85 -11.9 -3.72695 | opp_overlap 1778399 1778398 AATGGGGTCATAATC CTCTGCCTTGG ATGA CCAAGGAAGAG TTTAATACCACCCGT Shew185_1470 1777925 - 1778842 + | fructokinase TERM 2019 1778924 - 1778952 + F 100 -17.6 -3.57918 | opp_overlap 1778924 TATACGTTTTATAAA CATTAGCCCAGC AAAAC GCTGGGCTAATG TTATCTGCTATGCGT TERM 2020 1778952 - 1778924 - f 100 -18.3 -3.87373 | opp_overlap 1778924 TATACGTTTTATAAA CATTAGCCCAGCA AAA CGCTGGGCTAATG TTATCTGCTATGCGT Shew185_1471 1779015 - 1779761 + | hypothetical protein Shew185_1472 1779832 - 1780515 + | hypothetical protein TERM 2021 1780600 - 1780582 - T 100 -16 -5.45652 | opp_overlap 1780580 ATCGGTAATAAAAAA GGGGACCC TAA GGGTCCCC AATGAGTTGCAGAGA TERM 2022 1780684 - 1780696 + T 71 -4.1 -4.86621 | overlap 1780685 TCTGCGTGTACCTTA TCTAC GCC GTAGG TTTTTCCTTCAGCAT Shew185_1473 1782950 - 1780665 - | decaheme cytochrome c TERM 2023 1782593 - 1782603 + g 73 -5.4 -4.564 | GAATAGGGGCGCCAG TACC TGA GGTA TTTTCATTTGCCGTT Shew185_1474 1784431 - 1783457 - | LysR family transcriptional regulator TERM 2024 1784413 - 1784430 + g 77 -4.9 -4.89567 | GTTCACAGATTTGTT TGAGTAA TAAG TTGCTCA TTTTGTATTTTGCCC TERM 2025 1784723 - 1784698 - R 79 -9 -3.95214 | overlap 1784685 1784696 1784701 ATCGAGCTAAAAATA CAAGCTCGCC TAAGTG GGTGAGCTTG CGAGTGTCATTTATC Shew185_1475 1785195 - 1784746 - | hypothetical protein Shew185_1476 1785789 - 1785307 - | ferredoxin-type protein NapF TERM 2026 1785875 - 1785851 - R 100 -9.4 -5.38958 | gap 1, opp_overlap 1785851 AGTGATAAAGAAAAA TGGCTTG-GGA TATT TCCACAAGCCA TTCAATTTGTTAGCC TERM 2027 1785851 - 1785875 + r 75 -9.4 -3.37761 | gap 1, opp_overlap 1785851 AGTGATAAAGAAAAA TGGCTTG-GGA TATT TCCACAAGCCA TTCAATTTGTTAGCC Shew185_1477 1786898 - 1785885 - | UDP-glucose 4-epimerase TERM 2028 1786580 - 1786560 - G 71 -9 -3.60098 | opp_overlap 1786553 1786574 ATTTTTCACCTTAAA CTCCGCCA TAACT TGGCAGAG GATCAGGGTTCCTGT Shew185_1478 1787806 - 1786898 - | UTP-glucose-1-phosphate uridylyltransferase Shew185_1479 1788128 - 1788928 + | phenylalanine 4-monooxygenase Shew185_1480 1789072 - 1789410 + | pterin-4-alpha-carbinolamine dehydratase TERM 2029 1789428 - 1789457 + F 83 -3.6 -5.54885 | opp_overlap 1789428 AATTCGCCAATTTAA TCAGCATCTTAA TCTATT TTTTGATGCTGA TTTTTTCTTCCTGTT TERM 2030 1789588 - 1789576 - f 70 -7.7 -3.73068 | opp_overlap 1789575 TCGTTAAGGTAACAA CTTGC CTA GCAAG CGTCATTTTTGTTGT Shew185_1481 1789678 - 1791216 + | transcriptional regulator, TyrR TERM 2031 1791385 - 1791361 - f 86 -10.1 -3.98804 | overlap 1791362 CGAAATGTGAAATAA TTGACCCAAAT GTG ATTTGGGTCAC GCTATAGGAATCTGC TERM 2032 1791384 - 1791362 - f 93 -13.6 -2.9856 | overlap 1791361 GAAATGTGAAATAAT TGACCCAAAT GTG ATTTGGGTCA CGCTATAGGAATCTG TERM 2033 1791559 - 1791533 - f 83 -10.8 -3.66556 | AATCGCCGAATATAA GCTGGATGACGC CGC GCGTTTTCCAGC ACAATAAAATTGTAC Shew185_1482 1791603 - 1792589 + | fumarylacetoacetate (FAA) hydrolase TERM 2034 1792626 - 1792643 + F 93 -9.8 -4.84017 | opp_overlap 1792622 1792626 ATCGACTCAAACTAA CGGGGC TTAATT GCCCCG TTTTTATACAGACTT TERM 2035 1792643 - 1792626 - f 77 -9.8 -3.54676 | opp_overlap 1792626, overlap 1792622 ATCGACTCAAACTAA CGGGGC TTAATT GCCCCG TTTTTATACAGACTT Shew185_1483 1792677 - 1793327 + | maleylacetoacetate isomerase Shew185_1484 1793778 - 1794467 + | hypothetical protein TERM 2036 1795001 - 1794985 - f 82 -3.7 -5.49568 | overlap 1794987 AATTTAAAACAAAAA CCTATGT TGT ACATATG GAGTATGATGATGAA Shew185_1485 1795009 - 1795653 + | outer membrane protein W TERM 2037 1795674 - 1795700 + T 84 -12.4 -2.97051 | opp_overlap 1795680, overlap 1795680 GGATCAGATAAGCGT AAAAAAGGAGCC TTA GGCTCCTTTTTC GTTTCTGCACTTTAT TERM 2038 1795694 - 1795680 - T 95 -11.4 -5.11033 | opp_overlap 1795674 1795680 GATAAGCGTAAAAAA GGAGCC TTA GGCTCC TTTTTCGTTTCTGCA TERM 2039 1795680 - 1795694 + T 95 -11.4 -5.04601 | opp_overlap 1795680, overlap 1795674 GATAAGCGTAAAAAA GGAGCC TTA GGCTCC TTTTTCGTTTCTGCA Shew185_1486 1796489 - 1795746 - | short-chain dehydrogenase/reductase SDR TERM 2040 1796811 - 1796797 - g 71 -4.2 -4.7497 | TCGATGTATCAAAAA TGGATG TGC CAGCCA TAGTGATGGCGGAGC Shew185_1487 1796607 - 1797026 + | hypothetical protein Shew185_1488 1797097 - 1798038 + | homoserine O-succinyltransferase Shew185_1489 1798329 - 1799519 + | acetyl-CoA acetyltransferase TERM 2041 1800614 - 1800603 - g 71 -7.2 -4.11183 | TGGGACGATAAAGAA GCCG GTTA CGGC CCTGTCATAAGCCCT Shew185_1490 1799652 - 1801151 + | methylmalonate-semialdehyde dehydrogenase TERM 2042 1801884 - 1801864 - g 83 -7.5 -4.66938 | overlap 1801866 AGGCCGAAGATAAAA TGGGCTGGA ATG CCCAGCCGA CCCGTCAAATCACCT Shew185_1491 1801266 - 1802423 + | acyl-CoA dehydrogenase domain-containing protein Shew185_1492 1802483 - 1803256 + | enoyl-CoA hydratase TERM 2043 1803293 - 1803307 + G 80 -7.1 -4.59853 | TAAATCAGGCCACGA CCACG CAAAA CGTGG TTTTTCAAACCTTAG Shew185_1493 1803256 - 1804407 + | enoyl-CoA hydratase/isomerase Shew185_1494 1804583 - 1805485 + | 3-hydroxyisobutyrate dehydrogenase TERM 2044 1805653 - 1805633 - g 75 -3.3 -5.1356 | gap 1 GTGGACCAAGAAAAA CTCGAGCG AGCCTG CGCT-GAG CTTGGATCGGACACT Shew185_1495 1805510 - 1806268 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 2045 1806313 - 1806298 - f 93 -10.4 -4.89852 | opp_overlap 1806298 TGATATTCATAAAAA CCGAGC TGAG GCTCGG TTTTTTATTGAGTAA TERM 2046 1806298 - 1806313 + F 100 -10.4 -5.4833 | opp_overlap 1806298 TGATATTCATAAAAA CCGAGC TGAG GCTCGG TTTTTTATTGAGTAA TERM 2047 1806614 - 1806627 + G 70 -2.3 -4.96646 | GTGGTCGCTCTGTGG CCGTG ATCC CGTGG TTTTTCCTTATCTCA Shew185_1496 1806484 - 1806726 + | hypothetical protein TERM 2048 1807120 - 1807131 + G 80 -7.2 -4.59773 | opp_overlap 1807103 1807102 1807119 1807117, overlap 1807119 1807118 GCCGTCCATGAATAC GGCG GCGC CGCC TTTTTAGGGATAGGC Shew185_1497 1806790 - 1808838 + | peptidase S9 prolyl oligopeptidase TERM 2049 1808865 - 1808885 + T 74 -9 -3.53224 | gap 1 CCGTTATGACTCTTG GCC-GTCGC TATT GCGACTGGC TTTACGACAACACTC Shew185_1498 1809344 - 1808853 - | MerR family transcriptional regulator TERM 2050 1808896 - 1808927 + g 88 -8.8 -4.72486 | gap 1, opp_overlap 1808896 1808898 1808899, overlap 1808899 1808900 1808904 CTGGCTTTACGACAA CACTCAGAGCCTGCA TCG TGCAGGCTTTG-GTC TTTTTGGGATTTGTC TERM 2051 1808899 - 1808925 + g 100 -13.8 -3.9654 | opp_overlap 1808898 1808899 1808896, overlap 1808896 1808900 1808904 GCTTTACGACAACAC TCAGAGCCTGCA TCG TGCAGGCTTTGG TCTTTTTGGGATTTG TERM 2052 1808900 - 1808924 + g 100 -15.1 -2.96839 | opp_overlap 1808898 1808899 1808896, overlap 1808899 1808896 1808904 CTTTACGACAACACT CAGAGCCTGCA TCG TGCAGGCTTTG GTCTTTTTGGGATTT TERM 2053 1808904 - 1808920 + g 95 -12.3 -4.13748 | opp_overlap 1808898 1808899 1808896, overlap 1808900 1808899 1808896 ACGACAACACTCAGA GCCTGCA TCG TGCAGGC TTTGGTCTTTTTGGG TERM 2054 1809577 - 1809565 - g 72 -6.2 -4.4267 | opp_overlap 1809565 1809566, overlap 1809567 CGCGAAAATTGAAAA GGCG TTTGC CGCC CAAGCGGGCGTCGAG TERM 2055 1811353 - 1811342 - g 72 -5.8 -4.47707 | opp_overlap 1811341, overlap 1811339 1811345 CCCGAGCAAAAACAA CAGC ATGT GCTG GATTTGCAAAAGCAA Shew185_1499 1809500 - 1811734 + | copper-translocating P-type ATPase Shew185_1500 1812126 - 1813694 + | ABC transporter related TERM 2056 1813748 - 1813783 + T 95 -14.2 -3.26387 | opp_overlap 1813739 1813756, overlap 1813756 GCTAAATGCAGCATC AATAAAAACGCCGCAA TGCA TTGCGGCGTTTTTGTA TCTGTTATCTGTCTA TERM 2057 1813756 - 1813775 + T 100 -13.6 -5.09685 | opp_overlap 1813739 1813756, overlap 1813748 CAGCATCAATAAAAA CGCCGCAA TGCA TTGCGGCG TTTTTGTATCTGTTA TERM 2058 1813775 - 1813756 - T 100 -13.6 -5.15167 | opp_overlap 1813748 1813756, overlap 1813739 CAGCATCAATAAAAA CGCCGCAA TGCA TTGCGGCG TTTTTGTATCTGTTA TERM 2059 1813828 - 1813867 + T 73 -9.4 -3.15663 | gap 1 GCTTTTTATGCACTT GATTCTAGCGCATTAGCGA CGC TCGTTATTGCGC-AGACTC TTGCTGCACATAAAT Shew185_1501 1814377 - 1813853 - | Lipocalin family protein TERM 2060 1813993 - 1813983 - G 76 -8.2 -4.09519 | AGTAGCCACAAATAA CCCG TGT CGGG CCCCGATATAAAAGC Shew185_1502 1815416 - 1814538 - | hypothetical protein TERM 2061 1815453 - 1815479 + r 95 -12.2 -4.27316 | opp_overlap 1815450 1815453, overlap 1815454 ACAGAGAGTTAAGGA GCGACACCGTCC TGT GGACGGCGTCGA TTTTGCCTTAAAAAC TERM 2062 1815479 - 1815453 - R 93 -14.4 -2.78422 | opp_overlap 1815453 1815454, overlap 1815450 ACAGAGAGTTAAGGA GCGACACCGTCC TGT GGACGGCGTCGA TTTTGCCTTAAAAAC TERM 2063 1815454 - 1815478 + r 100 -15.7 -3.16068 | opp_overlap 1815453 1815450, overlap 1815453 CAGAGAGTTAAGGAG CGACACCGTCC TGT GGACGGCGTCG ATTTTGCCTTAAAAA Shew185_1503 1818116 - 1815522 - | FAD linked oxidase domain-containing protein TERM 2064 1816557 - 1816571 + g 83 -10 -4.15044 | GCCACCCTTGAGCGC CCAGAG TAA CTCTGG TTTATTGGCAACCGA Shew185_1504 1819323 - 1818295 - | diguanylate cyclase with PAS/PAC sensor TERM 2065 1819356 - 1819366 + r 82 -8.2 -4.4891 | AACCTAATGTCATCT GCGC TAA GCGC TTTTCTGATGATGAC TERM 2066 1820766 - 1820755 - R 76 -4.4 -5.06735 | opp_overlap 1820757 1820761, overlap 1820757 GACAAAGCACAAAAA GACA TGGC TGTC CCTGCTTTTCCTGCT TERM 2067 1820931 - 1820893 - R 71 -5.3 -4.54047 | gap 1, opp_overlap 1820893 TCACCGCACAGAAAA GCCCTTCTGACACAGCGA TTTA TCAC-ATGATAGAAGGGC GTTGTATTGGCATCG TERM 2068 1821052 - 1821041 - R 76 -4.4 -5.06735 | GACAAAGCACAAAAA GACA TGGC TGTC CCCGATTTTTCACAG TERM 2069 1821160 - 1821118 - R 72 -4.3 -4.82901 | CTTTTCTGAGAAAAA TCTCAGGA-GGCACTTATCTC GAA AAGATATG-GCTGTCCTGAGA AAAATCATTTCCCGC Shew185_1507 1821557 - 1821183 - | hypothetical protein TERM 2070 1821597 - 1821622 + r 83 -9.1 -4.11585 | opp_overlap 1821596 1821595 TTAATATCACTAACC CCTGCTAACTT TAAT AAGTTAGCAAG TTCTTTCTCATCACT Shew185_1508 1824844 - 1821575 - | transcriptional regulator, CadC TERM 2071 1823165 - 1823179 + g 91 -11.4 -4.17089 | TAACGGATTTTGGCT GAGGCC TTG GGCCTC TTTTAAAGGTTTACC TERM 2072 1825188 - 1825158 - R 100 -15.6 -3.89411 | opp_overlap 1825165, overlap 1825165 GCAAAACATCAACAA TGGAAAAGTGCCCA CTA TGGGCACTTTTCAA TGAGAGAGAAAACTC TERM 2073 1825165 - 1825181 + r 100 -12.3 -4.18018 | opp_overlap 1825165 1825158 ATCAACAATGGAAAA GTGCCCA CTA TGGGCAC TTTTCAATGAGAGAG TERM 2074 1825181 - 1825165 - R 100 -12.3 -4.36729 | opp_overlap 1825165, overlap 1825158 ATCAACAATGGAAAA GTGCCCA CTA TGGGCAC TTTTCAATGAGAGAG Shew185_1509 1826664 - 1825336 - | hypothetical protein Shew185_1510 1827533 - 1826676 - | hypothetical protein TERM 2075 1826750 - 1826760 + g 77 -4.6 -5.0065 | GACTTAGGGGTTCTT GGCC ACG GGTC TTTTGTTTATCGGTA Shew185_1511 1828407 - 1828754 + | hypothetical protein TERM 2076 1828846 - 1828861 + F 71 -6.2 -4.2558 | opp_overlap 1828846 CGGCGTTTCAGTATA TTCATC AATA GATGAA TTTTGCTGGAGCCTG Shew185_1512 1828879 - 1829580 + | TetR family transcriptional regulator TERM 2077 1830289 - 1830273 - g 76 -9.3 -3.87576 | overlap 1830267 CTAGAACAAGCCAAA GCCGCGG TGG CCGCCGC CAGCGCCAGTGTCGC Shew185_1513 1829577 - 1830731 + | secretion protein HlyD family protein Shew185_1514 1830728 - 1831684 + | ABC transporter related Shew185_1515 1831674 - 1832795 + | ABC-2 type transporter Shew185_1516 1833052 - 1833876 + | signal peptidase I TERM 2078 1834366 - 1834376 + G 75 -3.2 -5.11613 | TTAAAGGGGCATTTA CGTC ATC GATG TTTTTTCGGTGGTCT TERM 2079 1835258 - 1835272 + G 75 -11.4 -2.72344 | overlap 1835260 TTGCCAGTGTGTTAT CACCCG GCG CGGGTG TCGTTACCACTCGGG Shew185_1517 1834156 - 1835442 + | acetyl-CoA hydrolase/transferase Shew185_1518 1835659 - 1836489 + | hypothetical protein Shew185_1519 1837931 - 1836699 - | beta-lactamase TERM 2080 1837379 - 1837359 - G 82 -12.5 -3.15861 | TAGCACCGCCAGTAA GTCGGGCAG AGG CTGCCCGTC GGCATAACCTTTAAA TERM 2081 1839790 - 1839806 + G 77 -6.5 -4.63218 | opp_overlap 1839790 CTTTCATCGAACCAA GGGATCA CAA TGCTCCC TTTTGTTAAAGGCCA Shew185_1520 1839094 - 1840245 + | hypothetical protein TERM 2082 1840408 - 1840394 - g 71 -4.2 -4.76171 | GAAAAAAGCAGAAAA CGCG GCCTTAT CGCG ATGGGCTTCTCAGCA Shew185_1521 1840236 - 1841324 + | hypothetical protein Shew185_1522 1841334 - 1842011 + | hypothetical protein TERM 2083 1842032 - 1842062 + F 90 -12.7 -3.57144 | opp_overlap 1842019, overlap 1842038 AATAGCCAGTATTTA TGACAAGGCTGGT CCTAT ACCAACCTTGTCA TTTACGGCTACAGGG Shew185_1523 1842086 - 1843357 + | hypothetical protein Shew185_1524 1843368 - 1844681 + | putative periplasmic protein TERM 2084 1845056 - 1845091 + T 100 -18.6 -2.87564 | overlap 1845055 ACTCGATGTATGTAG TGGTCAACTAAAACTG GCCA CGGTTTTAGTTGACCA TATATGGACGCCTCA Shew185_1525 1846340 - 1845312 - | transposase IS116/IS110/IS902 family protein Shew185_1526 1847180 - 1846632 - | hypothetical protein Shew185_1527 1847801 - 1847208 - | lysine exporter protein LysE/YggA TERM 2085 1848513 - 1848501 - g 74 -2.7 -5.055 | CCAAGTTTCAAAAAA TTATC ACA GACAA GCGCTTAGAGCCGCA Shew185_1528 1848200 - 1848919 + | hypothetical protein TERM 2086 1849127 - 1849100 - T 76 -7.6 -4.18488 | opp_overlap 1849102, overlap 1849101 AGCCATCTCAATAAA GGGCGCGACAGT GAAA ACTGCCGCGCTT TTTCATTTTAACGGG TERM 2087 1849126 - 1849101 - T 79 -11.1 -3.10611 | opp_overlap 1849102, overlap 1849100 GCCATCTCAATAAAG GGCGCGACAGT GAAA ACTGCCGCGCT TTTTCATTTTAACGG TERM 2088 1849102 - 1849125 + T 100 -12.4 -5.0925 | opp_overlap 1849101 1849100 CCATCTCAATAAAGG GCGCGACAGT GAAA ACTGCCGCGC TTTTTCATTTTAACG Shew185_1529 1849989 - 1849168 - | hypothetical protein TERM 2089 1849941 - 1849969 + g 82 -5.3 -5.10029 | gap 1, overlap 1849943 GTTGATATTGCACTT GTTGCGCGT-CA TCTAAC TGTACGCGCATC TTTTTTAGCGTTCCT TERM 2090 1849943 - 1849967 + g 71 -6.5 -4.17355 | gap 1, overlap 1849941 TGATATTGCACTTGT TGCGCGT-CA TCTAAC TGTACGCGCA TCTTTTTTAGCGTTC Shew185_1530 1850324 - 1851478 + | putative esterase Shew185_1531 1851579 - 1852466 + | hypothetical protein TERM 2091 1852469 - 1852505 + T 81 -6.6 -4.7416 | gap 1, opp_overlap 1852475, overlap 1852475 AAAAGTGACTTAAAC AAAAAACGCCGCT-GGC ATCT GCTTAGCGGCGTTTCTA TTTTTAGCATTTTAA TERM 2092 1852475 - 1852499 + T 91 -10 -4.55887 | gap 1, opp_overlap 1852475, overlap 1852469 GACTTAAACAAAAAA CGCCGCT-GGC ATCT GCTTAGCGGCG TTTCTATTTTTAGCA TERM 2093 1852499 - 1852475 - T 100 -7.8 -5.65927 | gap 1, opp_overlap 1852475 1852469 GACTTAAACAAAAAA CGCCGCT-GGC ATCT GCTTAGCGGCG TTTCTATTTTTAGCA Shew185_1532 1853095 - 1852595 - | amino acid-binding ACT domain-containing protein Shew185_1533 1853296 - 1855554 + | binding-protein-dependent transport systems inner membrane component Shew185_1534 1855614 - 1857272 + | phosphate ABC transporter, inner membrane subunit PstA Shew185_1535 1857306 - 1858124 + | phosphate ABC transporter, ATPase subunit Shew185_1536 1858206 - 1858916 + | transcriptional regulator PhoU TERM 2094 1858948 - 1858970 + T 100 -8.4 -5.65927 | opp_overlap 1858948 GGGTTTATCCACAAA CGCTCTGC CTAATCC GCAGGGCG TTTTTTGTTTAGGTG Shew185_1537 1860382 - 1859213 - | hypothetical protein TERM 2095 1860162 - 1860174 + g 71 -9.1 -3.57462 | ACTAATTCATTTTTG GCCCT TGC AGGGC TTTCAACATGGAATG TERM 2096 1860189 - 1860199 + g 74 -4 -4.86862 | CTTTCAACATGGAAT GAAT AAT ATTC TTTTGATTTTTTCAG TERM 2097 1860539 - 1860528 - R 74 -4.4 -4.87665 | GCTGAGGCATAAAAA TGAG CTAA CTCA TTAAAAAATTGGCGT Shew185_1539 1862188 - 1861757 - | hypothetical protein TERM 2098 1862706 - 1862675 - R 72 -8.8 -3.47494 | gap 2, opp_overlap 1862679 AGTGAACCAGTATAA CG-GC-CGCTGCAG TTCTGG CTGCAGCGTGCTCG CAGAACTGACCGATT Shew185_1540 1863155 - 1862760 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2099 1863176 - 1863191 + H 73 -7.6 -4.10925 | overlap 1863174 TTTCCTTAGAATGGC TCAGAG TGGG CTCTGA TTTTGAACGCTATCT Shew185_1541 1863343 - 1863924 + | hypothetical protein TERM 2100 1863991 - 1864011 + F 100 -15.5 -5.31877 | overlap 1863990 TGTGGTATAATTTTT TGGCGACCA ATA TGGTCGCCA TTTTTTGTGCTGAAT Shew185_1542 1864322 - 1866298 + | choline/carnitine/betaine transporter TERM 2101 1866381 - 1866367 - f 82 -11.4 -3.21218 | opp_overlap 1866364 ATCGCGCACCATTAA CCCGCA AAG TGCGGG AGATATTGCCCCAAG TERM 2102 1866387 - 1866423 + F 100 -13.3 -5.51165 | gap 1, opp_overlap 1866387 AAAGTGCGGGAGATA TTGCCCCAAGTGATAA CTCGGA TTATC-CTTGGGGCAA TTTTTTTAGGGTTTT TERM 2103 1866423 - 1866387 - f 91 -14 -2.8806 | gap 1, opp_overlap 1866387 AAAGTGCGGGAGATA TTGCCCCAAGTGATAAC TCGG ATTATC-CTTGGGGCAA TTTTTTTAGGGTTTT Shew185_1543 1866454 - 1866816 + | hypothetical protein Shew185_1544 1867106 - 1866873 - | hypothetical protein Shew185_1545 1867271 - 1868674 + | hypothetical protein Shew185_1546 1868928 - 1869977 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 2104 1869978 - 1869990 + F 83 -9.1 -4.11484 | opp_overlap 1869971 GGCATTAAGTGGTAG GGTGC AGT GCACC TTTTCACGCCTTCGC Shew185_1547 1870149 - 1871057 + | alpha/beta hydrolase fold Shew185_1548 1871057 - 1872931 + | peptide synthase TERM 2105 1873020 - 1872992 - f 72 -9.8 -3.06915 | gap 1, opp_overlap 1872986, overlap 1873016 ACGTACTTTAGGCAA TGCCATTTATTGC TCCT GCA-TAAATGGCA TTCACGCCATCCATG TERM 2106 1873227 - 1873215 - f 70 -9.1 -3.17075 | opp_overlap 1873218 GCGCCTTGAATTGAA GCACC CTA GGTGC TCTGAAACTCGTATT Shew185_1549 1873406 - 1874605 + | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 2107 1874890 - 1874929 + G 100 -13 -4.20288 | gap 1, overlap 1874916 TTTACATCTTATTGT CTTGGCTTACCGTC-GCCT CAG AGGCCGAGAGTAAGCCAAG TTTCCTTTCCTTTTA Shew185_1550 1874684 - 1874923 + | hypothetical protein Shew185_1551 1876581 - 1874962 - | amino acid/peptide transporter TERM 2108 1875340 - 1875304 - G 100 -11.8 -4.7254 | gap 1, opp_overlap 1875319 1875324 AGCCGCGACTAAAAA CCAAATACTCACTAAGC CACT GCTTAGCG-GCATTTGG ATCCCGAGTACTAGC TERM 2109 1876516 - 1876495 - G 71 -6.5 -4.19324 | opp_overlap 1876495 1876505 AAAGCAGACAAACAA GCCCTTAGG ATGC CCAAAGAGC ATTTCGGGCGGGGGC Shew185_1552 1877127 - 1877729 + | hypothetical protein TERM 2110 1878147 - 1878169 + G 100 -9.2 -5.08178 | CATGAAATTACTGTG GCCGAAAGTT TAA AACTTTCAGC TTTTTATATCTGTAT Shew185_1553 1878018 - 1879004 + | integral membrane protein TerC TERM 2111 1879067 - 1879092 + F 100 -17.7 -5.55695 | AATAACGAATCTCTT GGCCGTTTAGC CCAT GCTAAACGGCC TTTTTTATATTCTTA TERM 2112 1880042 - 1880032 - g 80 -6.8 -4.74103 | opp_overlap 1880031 CTGCGAATGTAAAAA TGCC GAT GGCA GTGCTTGCAGTTTCC Shew185_1554 1879247 - 1880785 + | hypothetical protein TERM 2113 1880847 - 1880815 - f 75 -9.9 -3.37959 | opp_overlap 1880815 TAAGGTTAACACCAA CGCACTATCCGTC ATGAATG GCCAGATAGTGCG TTTTTTATGCTCAGC TERM 2114 1880815 - 1880847 + F 91 -7.8 -5.31275 | gap 1, opp_overlap 1880815 TAAGGTTAACACCAA CGCACTATC-CGTCA TGAA TGGCCAGATAGTGCG TTTTTTATGCTCAGC TERM 2115 1881883 - 1881862 - g 75 -3.7 -5.0538 | gap 1, opp_overlap 1881865, overlap 1881865 GCCGAGGCGAAAAAA CAC-GGCG CTATGCT CGCCTGTG CTAACGATCCCGATG Shew185_1555 1880977 - 1882698 + | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 2116 1882744 - 1882777 + F 100 -12.6 -5.01823 | opp_overlap 1882747, overlap 1882747 CATTCACTTTTATTA AAAGGCTACTGACA TCATGC TGTCAGTAGCCTTG TTTTATTCTTGTTGT TERM 2117 1882747 - 1882774 + F 100 -14.3 -4.55653 | opp_overlap 1882747, overlap 1882744 TCACTTTTATTAAAA GGCTACTGACA TCATGC TGTCAGTAGCC TTGTTTTATTCTTGT TERM 2118 1882774 - 1882747 - f 100 -14.3 -4.26076 | opp_overlap 1882744 1882747 TCACTTTTATTAAAA GGCTACTGACA TCATGC TGTCAGTAGCC TTGTTTTATTCTTGT Shew185_1556 1882872 - 1883255 + | glyoxalase/bleomycin resistance protein/dioxygenase Shew185_1557 1883342 - 1883806 + | transcription activator effector binding Shew185_1558 1883916 - 1884629 + | helix-turn-helix type 11 domain-containing protein TERM 2119 1884639 - 1884612 - T 93 -11.4 -4.42238 | opp_overlap 1884617, overlap 1884617 CGAGCCGAAGCAAAA GAAAAGCCACTC GAAT GAGTGGCTTTTT AATACATTTCTAATT TERM 2120 1884617 - 1884634 + T 95 -11.3 -4.78764 | opp_overlap 1884617 1884612 CGAAGCAAAAGAAAA GCCACTC GAAT GAGTGGC TTTTTAATACATTTC TERM 2121 1884634 - 1884617 - T 100 -11.3 -5.18643 | opp_overlap 1884617, overlap 1884612 CGAAGCAAAAGAAAA GCCACTC GAAT GAGTGGC TTTTTAATACATTTC Shew185_1559 1886038 - 1884746 - | Aerolysin/hemolysin/leukocidin toxin TERM 2122 1885257 - 1885273 + g 77 -2.9 -5.27335 | ATATATAAACTTGAG GTGTATG GGA CATCCGC TTTTTGTTTAAACAG TERM 2123 1886789 - 1886761 - R 84 -12.5 -3.08312 | opp_overlap 1886761, overlap 1886763 AAGTGATTGATGCAA GAGCCAGTGCC GCTGCTG GGCACTGACTC TTTGTTTACTTAATG TERM 2124 1886761 - 1886789 + r 91 -10.3 -4.58308 | opp_overlap 1886761 1886763 AAGTGATTGATGCAA GAGCCAGTGCC GCTGCTG GGCACTGACTC TTTGTTTACTTAATG TERM 2125 1886787 - 1886763 - R 70 -9.3 -3.09878 | opp_overlap 1886761, overlap 1886761 GTGATTGATGCAAGA GCCAGTGCC GCTGCTG GGCACTGAC TCTTTGTTTACTTAA Shew185_1560 1887115 - 1886813 - | branched-chain amino acid transport Shew185_1561 1887933 - 1887112 - | AzlC family protein TERM 2126 1887224 - 1887242 + g 74 -9.6 -3.51329 | overlap 1887225 GCTTCCTTGGTCACT TTGGCGTA AAG TACGCCAG TTGTCATTCCGGCTA TERM 2127 1887225 - 1887241 + g 72 -10.9 -2.70476 | overlap 1887224 CTTCCTTGGTCACTT TGGCGTA AAG TACGCCA GTTGTCATTCCGGCT TERM 2128 1887973 - 1887949 - R 87 -8.5 -4.56597 | opp_overlap 1887954, overlap 1887952 TTTGGCTCCTAAAAA TAGCGGCGACC TAG GGTCGCTGTTA AACAATGAATGCTTG TERM 2129 1887970 - 1887952 - R 75 -10.2 -2.93708 | opp_overlap 1887954, overlap 1887949 GGCTCCTAAAAATAG CGGCGACC TAG GGTCGCTG TTAAACAATGAATGC TERM 2130 1887954 - 1887968 + r 81 -11.4 -3.03243 | opp_overlap 1887952 1887949 CTCCTAAAAATAGCG GCGACC TAG GGTCGC TGTTAAACAATGAAT Shew185_1562 1888982 - 1888146 - | AraC family transcriptional regulator Shew185_1563 1889825 - 1889169 - | hexapaptide repeat-containing transferase Shew185_1564 1890272 - 1889955 - | hypothetical protein Shew185_1565 1891070 - 1890618 - | hypothetical protein Shew185_1566 1891589 - 1891215 - | hypothetical protein TERM 2131 1891711 - 1891692 - H 79 -5.6 -5.00196 | opp_overlap 1891706 GCTTAAATAATAAAA GTCATCCC AGAG GGGTCGAC GGCGGCATTTACTGC TERM 2132 1891832 - 1891820 - H 79 -10.5 -3.53018 | overlap 1891818 GTCAGATATGAAAGA GCGGC CAT GCCGC CAACGGTCACTTCCA TERM 2133 1893856 - 1893836 - g 74 -6.9 -4.3898 | opp_overlap 1893841, overlap 1893838 ATTATTCGTAGAAAA GGTAACCTT ACT AAGGTTATC GCACCAGAAATACAA Shew185_1567 1892429 - 1894099 + | AAA ATPase Shew185_1568 1894102 - 1894965 + | hypothetical protein TERM 2134 1895282 - 1895260 - T 100 -16.4 -5.27335 | opp_overlap 1895260 TGCCGCAAATAAAAA CAGCCGCAAA TTA TTTGCGGCTG TTTGACATTAAAGCG TERM 2135 1895260 - 1895282 + T 100 -16.4 -3.66178 | opp_overlap 1895260 TGCCGCAAATAAAAA CAGCCGCAAA TTA TTTGCGGCTG TTTGACATTAAAGCG Shew185_1569 1896988 - 1895339 - | pyridoxal-dependent decarboxylase TERM 2136 1897205 - 1897183 - R 89 -9.1 -4.72272 | opp_overlap 1897186, overlap 1897186 GCGGTGGAGTAAAAA TAAGGCGCC GTTTG GGCGCCTTT GCTCGATTTCCCCTT TERM 2137 1897202 - 1897186 - R 91 -10.8 -4.47707 | opp_overlap 1897186, overlap 1897183 GTGGAGTAAAAATAA GGCGCC GTTTG GGCGCC TTTGCTCGATTTCCC TERM 2138 1897186 - 1897202 + r 86 -10.8 -3.82097 | opp_overlap 1897186 1897183 GTGGAGTAAAAATAA GGCGCC GTTTG GGCGCC TTTGCTCGATTTCCC Shew185_1570 1898442 - 1897231 - | glycerate kinase TERM 2139 1897724 - 1897734 + g 83 -8.2 -4.56597 | overlap 1897720 TGCTTAACCATCGCA GGCG TTG CGCC TTTTTGCGGACCAAA TERM 2140 1898014 - 1897983 - G 76 -8.8 -4.11692 | CACCTAGGCCTAAAA TGATGTGCTTTATC CCCC GATTAAGCGCATCA CAAATCAGCTCGCCC Shew185_1571 1899865 - 1898507 - | gluconate transporter TERM 2141 1899173 - 1899192 + g 85 -5 -5.4477 | gap 1 GAAGGCTTTTAATGG GCTG-GGCA GGG TGCCATAGC TTTTTTTCAGGGTTT TERM 2142 1899929 - 1899966 + r 73 -8.5 -3.70068 | CTTATATTGTAGGGC GCAGTGCTTATTTGGGT CTGA GTCCAAATGAGGGCTGC TTTAAGGTTATCCTA TERM 2143 1900061 - 1900088 + r 75 -10 -3.09933 | overlap 1900064 CCGCGTTATGTTTCG CCATTTTTGTGC TCAT GCACAAAAATGC TTAGGTGAATTCGAA TERM 2144 1900064 - 1900085 + r 73 -10.3 -2.76189 | overlap 1900061 CGTTATGTTTCGCCA TTTTTGTGC TCAT GCACAAAAA TGCTTAGGTGAATTC TERM 2145 1900159 - 1900130 - R 87 -12.3 -3.28712 | opp_overlap 1900117 1900131, overlap 1900131 GCGTTTTGTCGATAA GGGTTGGCAAATA GGGC TATTTGCCAACCT TAAATAGGAGGAACT TERM 2146 1900131 - 1900158 + r 100 -15.8 -3.05384 | opp_overlap 1900130 1900131, overlap 1900117 CGTTTTGTCGATAAG GGTTGGCAAATA GGGC TATTTGCCAACC TTAAATAGGAGGAAC TERM 2147 1900158 - 1900131 - R 100 -15.8 -2.57132 | opp_overlap 1900131 1900117, overlap 1900130 CGTTTTGTCGATAAG GGTTGGCAAATA GGGC TATTTGCCAACC TTAAATAGGAGGAAC Shew185_1572 1901199 - 1900192 - | catalase domain-containing protein Shew185_1573 1902592 - 1901351 - | transcriptional regulator, CdaR Shew185_1574 1903299 - 1902601 - | phage SPO1 DNA polymerase domain-containing protein TERM 2148 1902991 - 1903012 + g 71 -4.3 -4.77925 | overlap 1902978 1902995 GGCGGCGCATTCGGG GCGCGGTGG TTTA TCACCCTGC TTTTTACCGTTTTTT TERM 2149 1903061 - 1903051 - G 87 -6.8 -5.07652 | GCCCGGAAAACAAAA TCCC ATA GGGA TAATGGCAAAAAGGG Shew185_1575 1904049 - 1903444 - | hypothetical protein TERM 2150 1903946 - 1903927 - G 73 -7.8 -4.1021 | gap 1 GCCGAGAATGATAAA CAGGCTGGC GGT GCC-GCCCG AGGGGTCGAACGCCA TERM 2151 1904152 - 1904163 + r 70 -3 -5.15526 | CGCGCCAGAGTCTGA TCTT ATTC AAGA TTTTTACTTTTATCT TERM 2152 1904180 - 1904206 + r 70 -8.1 -3.71873 | TTTTACTTTTATCTG GGCAGATGTAA TGATT TTACATCTGAC TTTGCATGTGACTGC TERM 2153 1904231 - 1904259 + r 100 -16.1 -2.78278 | opp_overlap 1904232 1904237, overlap 1904237 GACTGCTGCGGTTAA ACAAAAGCCCGCA AAA TGCGGGCTTTTGG ATTGTCTATCATTGA TERM 2154 1904258 - 1904232 - R 100 -19.6 -3.53091 | opp_overlap 1904231 1904237, overlap 1904237 ACTGCTGCGGTTAAA CAAAAGCCCGCA AAA TGCGGGCTTTTG GATTGTCTATCATTG TERM 2155 1904237 - 1904253 + r 100 -13.7 -4.3487 | opp_overlap 1904237 1904232, overlap 1904231 TGCGGTTAAACAAAA GCCCGCA AAA TGCGGGC TTTTGGATTGTCTAT TERM 2156 1904253 - 1904237 - R 100 -13.7 -4.86731 | opp_overlap 1904231 1904237, overlap 1904232 TGCGGTTAAACAAAA GCCCGCA AAA TGCGGGC TTTTGGATTGTCTAT Shew185_1576 1906365 - 1904278 - | outer membrane protein precursor MtrB Shew185_1577 1907379 - 1906378 - | cytochrome C family protein TERM 2157 1907435 - 1907418 - R 100 -12.7 -4.3351 | opp_overlap 1907418, overlap 1907409 ACAAAATTCAAGAAA GGGGGAG CGAA CTCCCCC TGCTTGGGCAAATTA TERM 2158 1907418 - 1907435 + r 83 -12.7 -2.71681 | opp_overlap 1907409 1907418 ACAAAATTCAAGAAA GGGGGAG CGAA CTCCCCC TGCTTGGGCAAATTA Shew185_1578 1909400 - 1907448 - | decaheme cytochrome c TERM 2159 1908337 - 1908361 + g 79 -11.5 -3.14683 | opp_overlap 1908359 GCATCAATCGCGTTA CCGTCTTTGTC TAA GATAGAGACGG TTAATACCGCAGTAT TERM 2160 1909135 - 1909153 + g 78 -5.2 -5.00616 | CCTTGTGGGATCAAC TGTGCTGC GGC GAAGCGCA TTTTTTGGAGACCAA TERM 2161 1909699 - 1909670 - R 100 -16.7 -3.4314 | opp_overlap 1909674, overlap 1909674 TAAATGGCAAGAATA TAAAGAGAGAGGT AAAA ACCTCTCTCTTTA GTAACGATAAAACAT TERM 2162 1909674 - 1909695 + r 95 -13.1 -3.73775 | opp_overlap 1909674 1909670 TGGCAAGAATATAAA GAGAGAGGT AAAA ACCTCTCTC TTTAGTAACGATAAA TERM 2163 1909695 - 1909674 - R 100 -13.1 -4.34263 | opp_overlap 1909674, overlap 1909670 TGGCAAGAATATAAA GAGAGAGGT AAAA ACCTCTCTC TTTAGTAACGATAAA Shew185_1579 1911934 - 1909742 - | decaheme cytochrome c TERM 2164 1909855 - 1909867 + g 74 -6.3 -4.40358 | AAATACCACCGTTAG TCTCA ATG TGAGA TTTTGTCGCATCAGT TERM 2165 1911549 - 1911559 + g 73 -2.4 -5.10029 | opp_overlap 1911543 1911544, overlap 1911544 1911550 ACGCCAGAAGGCACT GTGC CAG GCTC TTTTTTGGCATTGAT Shew185_1580 1914102 - 1912183 - | decaheme cytochrome c MtrF TERM 2166 1912302 - 1912290 - G 85 -7.7 -4.72272 | opp_overlap 1912293, overlap 1912293 TTGTGCCAGCAAAAA CAGCA CCT TGCTG AGCCATGTGGTTATG TERM 2167 1912990 - 1912979 - G 75 -5.8 -4.48987 | GTGGTATAATCAAAA CTGG TTCC CCAG TTGGCATAGACCCTT Shew185_1581 1916288 - 1914138 - | outer membrane protein, putative TERM 2168 1914373 - 1914400 + g 72 -10.6 -2.95091 | TCGCCATAGGGACTG GTGATGCCGTAG ATGA CTTCGGTATCAC TCTGTCCATTGGAAT TERM 2169 1914785 - 1914799 + g 70 -7.8 -3.85909 | overlap 1914788 CAAGGTAGGATTTAC GCAGCC AAG GGTTGC TTTGGCTTTGAGTGG Shew185_1582 1917267 - 1916302 - | cytochrome C family protein TERM 2170 1917219 - 1917236 + g 83 -9.9 -4.24002 | opp_overlap 1917219 1917217 1917215 1917213 ATAACAAAATACATA GCATAGC CTTA GCTATGC TTTTGAACTTTAGCC TERM 2171 1917236 - 1917219 - G 73 -9.9 -3.3501 | opp_overlap 1917219, overlap 1917217 1917215 1917213 ATAACAAAATACATA GCATAGC CTTA GCTATGC TTTTGAACTTTAGCC Shew185_1583 1917703 - 1917942 + | FeoA family protein Shew185_1584 1917935 - 1920229 + | ferrous iron transport protein B TERM 2172 1920282 - 1920314 + F 74 -6.4 -4.34402 | opp_overlap 1920283 1920285 1920290, overlap 1920285 1920290 GCTTAGTTAGGTCAA AGATAAAAGCAGCT TTCAT GGCTGCTTTTATTG TTTTACTATCGCGGC TERM 2173 1920311 - 1920285 - f 75 -9.6 -3.38522 | opp_overlap 1920285 1920282 1920290, overlap 1920283 1920290 TAGTTAGGTCAAAGA TAAAAGCAGC TTTCATG GCTGCTTTTA TTGTTTTACTATCGC TERM 2174 1920285 - 1920311 + F 89 -10.3 -4.29302 | opp_overlap 1920283 1920285 1920290, overlap 1920282 1920290 TAGTTAGGTCAAAGA TAAAAGCAGCT TTCAT GGCTGCTTTTA TTGTTTTACTATCGC TERM 2175 1920290 - 1920306 + F 81 -5.8 -5.10656 | opp_overlap 1920285 1920283 1920290, overlap 1920285 1920282 AGGTCAAAGATAAAA GCAGCT TTCAT GGCTGC TTTTATTGTTTTACT TERM 2176 1920306 - 1920290 - f 74 -5.1 -4.79451 | opp_overlap 1920290 1920285 1920282, overlap 1920285 1920283 AGGTCAAAGATAAAA GCAGC TTTCATG GCTGC TTTTATTGTTTTACT TERM 2177 1921220 - 1921233 + G 71 -6.7 -4.1466 | AAGCGCCGAATCGTA CTCGT CAAT ACGAG TTTTCACGCTTAAAT Shew185_1585 1920400 - 1922115 + | glutaminyl-tRNA synthetase TERM 2178 1922230 - 1922247 + T 100 -11.3 -5.86976 | opp_overlap 1922230 ATTAGACCCAAAAAA GAAGGCC TTTA GGCCTTC TTTTTTATTTTATGA TERM 2179 1922247 - 1922230 - T 95 -11.3 -5.13473 | opp_overlap 1922230 ATTAGACCCAAAAAA GAAGGCC TTTA GGCCTTC TTTTTTATTTTATGA Shew185_1586 1922907 - 1922311 - | hypothetical protein Shew185_1587 1923191 - 1923961 + | tRNA--hydroxylase TERM 2180 1923965 - 1923975 + T 73 -5.4 -4.62872 | CTAGCAAATTGATTT GAAG CAC CTTC TTTTTAAAAATTGAT TERM 2181 1924043 - 1924014 - T 71 -6.5 -4.26188 | opp_overlap 1924017 1924021, overlap 1924015 1924017 1924021 TCGATATAGCTAAAA CGATTAACGGTTC GCTC GAACCGTTAATAT AATGCGTCTTTAACC TERM 2182 1924042 - 1924015 - T 75 -10 -3.15231 | opp_overlap 1924017 1924021, overlap 1924014 1924017 1924021 CGATATAGCTAAAAC GATTAACGGTTC GCTC GAACCGTTAATA TAATGCGTCTTTAAC TERM 2183 1924040 - 1924017 - T 85 -12.6 -3.13068 | opp_overlap 1924017 1924021, overlap 1924015 1924014 1924021 ATATAGCTAAAACGA TTAACGGTTC GCTC GAACCGTTAA TATAATGCGTCTTTA TERM 2184 1924017 - 1924040 + T 83 -12.6 -2.83701 | opp_overlap 1924017 1924015 1924014 1924021, overlap 1924021 ATATAGCTAAAACGA TTAACGGTTC GCTC GAACCGTTAA TATAATGCGTCTTTA TERM 2185 1924036 - 1924021 - T 72 -9 -3.37935 | opp_overlap 1924017 1924021, overlap 1924017 1924015 1924014 AGCTAAAACGATTAA CGGTTC GCTC GAACCG TTAATATAATGCGTC TERM 2186 1924021 - 1924036 + T 72 -9 -3.29947 | opp_overlap 1924021 1924017 1924015 1924014, overlap 1924017 AGCTAAAACGATTAA CGGTTC GCTC GAACCG TTAATATAATGCGTC Shew185_1588 1924810 - 1924088 - | UDP-2,3-diacylglucosamine hydrolase TERM 2187 1924288 - 1924311 + g 83 -4.6 -5.2189 | gap 1 CATCGACCGCATTGG GCTCCAC-ATC CAT GATGGTGTAGC TTTTTTGCTGATTGC TERM 2188 1924792 - 1924765 - G 100 -16.4 -3.25823 | CTTGGGTGATATCAA GACGATCTGCAC TCAG GTGCAGATCGCC TATAAATAAAGTTCG Shew185_1589 1925314 - 1924820 - | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 2189 1925079 - 1925093 + g 71 -8.6 -3.762 | opp_overlap 1925073, overlap 1925073 1925072 GCGACAGTACCAGTA CGGTTT GAT AAACCG TTATTGGCTTCGTTT TERM 2190 1925998 - 1925980 - g 85 -10.4 -4.10552 | opp_overlap 1925978 1925980 GTGGACGAAACCAAA CAAAATCC AAT GGATTTTG TGTTGTGGAAAATGT TERM 2191 1925980 - 1925998 + G 73 -10.4 -3.22102 | opp_overlap 1925980, overlap 1925978 GTGGACGAAACCAAA CAAAATCC AAT GGATTTTG TGTTGTGGAAAATGT TERM 2192 1926271 - 1926254 - g 74 -2.7 -5.03314 | opp_overlap 1926254 TTGACCGTGAAAAAA TGTCTAA GTCA TTAGGCA ATTTCTTTACCATTC Shew185_1590 1925455 - 1926834 + | cysteinyl-tRNA synthetase TERM 2193 1926918 - 1926869 - T 84 -10.3 -3.84825 | gap 1, opp_overlap 1926880 1926887, overlap 1926887 CTCATCTAGACGAAA TCTTCAGCCATAAAAAAACCTGCA TCA TGCAGG-TTTTTTATGCTTGCAGA ACTTAGAACTTAGAA TERM 2194 1926880 - 1926908 + T 81 -11.9 -2.71681 | opp_overlap 1926869 1926887, overlap 1926887 GAAATCTTCAGCCAT AAAAAAACCTGCA TCA TGCAGGTTTTTTA TGCTTGCAGAACTTA TERM 2195 1926901 - 1926887 - T 100 -10 -5.64274 | opp_overlap 1926880 1926887, overlap 1926869 TCAGCCATAAAAAAA CCTGCA TCA TGCAGG TTTTTTATGCTTGCA TERM 2196 1926887 - 1926901 + T 100 -10 -5.37345 | opp_overlap 1926887 1926869, overlap 1926880 TCAGCCATAAAAAAA CCTGCA TCA TGCAGG TTTTTTATGCTTGCA Shew185_1591 1927866 - 1927012 - | methenyltetrahydrofolate cyclohydrolase TERM 2197 1928468 - 1928446 - H 71 -9.8 -2.88544 | overlap 1928449 GCTCAGTTGGATAGA GCACCCGCCT TCT AAGCGGGTGG TCGCAGGTTCGAATC TERM 2198 1928465 - 1928449 - H 72 -10.1 -2.69468 | overlap 1928446 CAGTTGGATAGAGCA CCCGCCT TCT AAGCGGG TGGTCGCAGGTTCGA TERM 2199 1928639 - 1928607 - H 88 -10.8 -3.96624 | opp_overlap 1928616, overlap 1928608 1928616 TACTTTGAGTACAAA TTAAAAAAAGCGAC CTTGT GTCGCTTTTTTTAT ACCCCAGATTCGGCT TERM 2200 1928638 - 1928608 - H 95 -14.3 -2.97653 | opp_overlap 1928616, overlap 1928607 1928616 ACTTTGAGTACAAAT TAAAAAAAGCGAC CTTGT GTCGCTTTTTTTA TACCCCAGATTCGGC TERM 2201 1928630 - 1928616 - H 100 -7.1 -5.75822 | opp_overlap 1928616, overlap 1928608 1928607 TACAAATTAAAAAAA GCGAC CTTGT GTCGC TTTTTTTATACCCCA TERM 2202 1928616 - 1928630 + H 100 -7.1 -5.60993 | opp_overlap 1928608 1928607 1928616 TACAAATTAAAAAAA GCGAC CTTGT GTCGC TTTTTTTATACCCCA Shew185_1592 1928846 - 1930150 + | trigger factor TERM 2203 1930188 - 1930217 + F 100 -17.3 -5.27335 | opp_overlap 1930188, overlap 1930177 GTTCGCCATTTATAA TGGCTCGTATGAG GCTC CTCATGCGAGCCA TTTTTATTTAGGGAA TERM 2204 1930217 - 1930188 - f 100 -15.1 -3.35679 | opp_overlap 1930177 1930188 GTTCGCCATTTATAA TGGCTCGTATGAG GCTC CTCATGCGAGCCA TTTTTATTTAGGGAA TERM 2205 1930432 - 1930443 + G 71 -3 -4.91712 | GAATCAGAAAGCCCA GATA AAGA TATC TTTTTATACATTAAC TERM 2206 1930549 - 1930565 + G 78 -7.9 -4.44667 | GTCTGTATCGGCCAA GCGGCCA GCA TGGGCGC TTTCTTATTAGCCGG Shew185_1593 1930240 - 1930848 + | ATP-dependent Clp protease proteolytic subunit Shew185_1594 1930933 - 1932213 + | ATP-dependent protease ATP-binding subunit TERM 2207 1932264 - 1932242 - f 93 -10.6 -4.86939 | opp_overlap 1932245, overlap 1932245 TAATAAACTGAAAAA CAAGGAGTCC AAT GGACTCCTTT TTTCGTATTAGCCAT TERM 2208 1932245 - 1932261 + F 100 -12.3 -5.27779 | opp_overlap 1932242 1932245 TAAACTGAAAAACAA GGAGTCC AAT GGACTCC TTTTTTCGTATTAGC TERM 2209 1932261 - 1932245 - f 100 -12.3 -4.50298 | opp_overlap 1932245, overlap 1932242 TAAACTGAAAAACAA GGAGTCC AAT GGACTCC TTTTTTCGTATTAGC TERM 2210 1933168 - 1933156 - g 77 -2.6 -5.28942 | GAGGCGAAAGAAAAA GCCC TCGCT GAGC TTAACAAGCTACGTA Shew185_1595 1932346 - 1934703 + | ATP-dependent protease La TERM 2211 1934790 - 1934821 + F 95 -13 -3.65425 | CTAGGTCTGTGGAGA GCCAGCTGCTCCAA GCCC TTGGCGCAACTGGC TTTGAGCTGTATCCA Shew185_1596 1934963 - 1935235 + | histone family protein DNA-binding protein TERM 2212 1935277 - 1935293 + F 82 -8 -4.62471 | opp_overlap 1935277, overlap 1935271 CATTCGTAATGACAA GCACTG TTTAT CAGTGC TTTTTACGAATTGAA TERM 2213 1935402 - 1935424 + F 100 -10.6 -5.62288 | opp_overlap 1935402 CATAAATTACAGAAA GGCGCATC TCAAACT GATGCGCC TTTTTATTTTGTTAA TERM 2214 1935424 - 1935402 - f 90 -10.6 -4.19123 | opp_overlap 1935402 CATAAATTACAGAAA GGCGCATC TCAAACT GATGCGCC TTTTTATTTTGTTAA TERM 2215 1935485 - 1935524 + G 77 -5 -4.90471 | gap 1, opp_overlap 1935475 AAGATCCGCGATGGT TCGCAAG-GCGTGATTGCT AAA GGCATTCTCGTACTTGTGA TTTTATCTTTTGCAT Shew185_1597 1935461 - 1937326 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2216 1937405 - 1937384 - T 100 -14.5 -4.73388 | opp_overlap 1937384 AACTTCGATTAAAAA GGCCAAGTG ATTT CACTTGGCC TTTTTGTTTTTCAAT TERM 2217 1937384 - 1937405 + T 100 -14.5 -5.63236 | opp_overlap 1937384 AACTTCGATTAAAAA GGCCAAGTG ATTT CACTTGGCC TTTTTGTTTTTCAAT Shew185_1598 1937728 - 1937516 - | TOBE domain-containing protein TERM 2218 1937830 - 1937813 - R 100 -11.3 -5.27335 | opp_overlap 1937813 CGTTGCAAATAAAAA CGCCACT AAAA AGTGGCG TTTAACGTTGTGATA TERM 2219 1937813 - 1937830 + r 88 -11.3 -3.70068 | opp_overlap 1937813 CGTTGCAAATAAAAA CGCCACT AAAA AGTGGCG TTTAACGTTGTGATA Shew185_1599 1939073 - 1937871 - | trans-2-enoyl-CoA reductase TERM 2220 1938687 - 1938713 + g 89 -3.6 -5.54338 | overlap 1938678 1938689 CATGTCGATTTCACC GAGATCTTGCTT AAT AAGCTCGATCAC TTTTTGTTTTGCTTC Shew185_1600 1939964 - 1939179 - | ABC transporter related TERM 2221 1939788 - 1939754 - G 81 -3.4 -5.41143 | overlap 1939755 1939756 CACCTTCGAAAAAAA TCTCGCCGCCGCTGCG GGG CTCAGCACCGACCAAA ATGCGGGCTAAGGTA TERM 2222 1939821 - 1939790 - G 73 -7.2 -4.28994 | overlap 1939791 CAGCACCGACCAAAA TGCGGGCTAAGGTA CTTT TACCCGAACCCGCT TCACCCACTATGGCT TERM 2223 1939820 - 1939791 - G 76 -10.7 -3.16914 | overlap 1939790 AGCACCGACCAAAAT GCGGGCTAAGGTA CTTT TACCCGAACCCGC TTCACCCACTATGGC Shew185_1601 1940952 - 1939945 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 2224 1940508 - 1940529 + g 70 -8.1 -3.8709 | gap 1, overlap 1940495 AGCTAGACATTACCT GTCGAGGATT TTT AATCC-CGAC TTTATGCAGCCATTT Shew185_1602 1941846 - 1940956 - | binding-protein-dependent transport systems inner membrane component Shew185_1603 1942864 - 1941833 - | binding-protein-dependent transport systems inner membrane component Shew185_1604 1944441 - 1942864 - | extracellular solute-binding protein TERM 2225 1944006 - 1943992 - G 71 -2.8 -4.86731 | overlap 1943987 GCGGGTTAAATAAAA GACCAC TTC ATGATC GTTTATCTTTTCTAT Shew185_1605 1945650 - 1944559 - | Fis family transcriptional regulator TERM 2226 1945644 - 1945654 + g 80 -4 -5.32699 | CTTGCTGAAATTTAT TATC CAC GATA TTTTTTAGTCTTTCG Shew185_1606 1945828 - 1946511 + | phage shock protein A, PspA Shew185_1607 1946535 - 1946768 + | phage shock protein B Shew185_1608 1946755 - 1947141 + | phage shock protein C, PspC TERM 2227 1947152 - 1947169 + F 83 -9.8 -3.84915 | opp_overlap 1947152 TGTAACCATTCTAAA GGGCGG CCATGT CCGCCC TTGTTGCTTAATCTC TERM 2228 1947169 - 1947152 - f 79 -9.8 -3.63895 | opp_overlap 1947152 TGTAACCATTCTAAA GGGCGG CCATGT CCGCCC TTGTTGCTTAATCTC Shew185_1609 1947255 - 1948715 + | protein of unknown function DUF463 YcjX family protein TERM 2229 1948868 - 1948849 - g 76 -7.1 -4.45544 | opp_overlap 1948849 1948847 GGCCATTAAGCAAAA GCCGCTG AAAAAG CAGCAGC TGTTTGACCCACAAG TERM 2230 1949348 - 1949332 - g 73 -9.5 -3.35996 | opp_overlap 1949344, overlap 1949337 CAGTTTTATCGATAA CATAGTG TGC CACTATG GCGACAGCCAAGGTT Shew185_1610 1948712 - 1949986 + | hypothetical protein TERM 2231 1950035 - 1950062 + F 90 -3.5 -5.9667 | gap 1 AGTCGTCAACAAAGA TGCGTTAATGGG CTGGT TCC-TTAGCGCA TTTTTTTATGTTTTT Shew185_1611 1950342 - 1951535 + | methionine gamma-lyase Shew185_1612 1951763 - 1952131 + | helix-hairpin-helix repeat-containing competence protein ComEA TERM 2232 1952233 - 1952258 + T 81 -11.3 -2.94888 | opp_overlap 1952238 1952240, overlap 1952231 1952238 TCAGGGAAATGTCTA TAAAAGTCTGC ATTT GCAGGCTTTTA TCATTTCAATCACTT TERM 2233 1952238 - 1952253 + T 79 -6.8 -4.62168 | opp_overlap 1952238 1952240, overlap 1952233 1952231 GAAATGTCTATAAAA GTCTGC ATTT GCAGGC TTTTATCATTTCAAT Shew185_1613 1953032 - 1952742 - | hypothetical protein TERM 2234 1953032 - 1953050 + r 74 -6 -4.47271 | overlap 1953033 1953040 GGATTTCGAGTTGCA TCGTTATG CTC CATGACGG TTTTCATTGAGTTTG Shew185_1614 1953974 - 1953066 - | histone deacetylase superfamily protein TERM 2235 1953948 - 1953927 - G 75 -11.6 -2.53715 | overlap 1953926 GTGATGAGGAGGAAG CGCCAGCT TGGAAT AGCTGGCG TGATAAACCAGTGGG Shew185_1615 1954693 - 1954004 - | hypothetical protein Shew185_1616 1955366 - 1954704 - | primosomal replication protein N'', putative Shew185_1617 1956136 - 1955363 - | hypothetical protein Shew185_1618 1958218 - 1956146 - | ATP-dependent DNA helicase DinG Shew185_1619 1958339 - 1960768 + | DNA polymerase II Shew185_1620 1960992 - 1962203 + | porin TERM 2236 1962268 - 1962249 - f 100 -12.2 -4.77157 | opp_overlap 1962249 TGAATTTACCAAAAA GCCAGTCA GCAA TGACTGGC TTTTTTGTTTTTAAA TERM 2237 1962249 - 1962268 + F 100 -12.2 -5.93252 | opp_overlap 1962249 TGAATTTACCAAAAA GCCAGTCA GCAA TGACTGGC TTTTTTGTTTTTAAA Shew185_1621 1962696 - 1965488 + | TonB-dependent receptor TERM 2238 1965511 - 1965551 + F 81 -12 -2.59458 | opp_overlap 1965515, overlap 1965515 TAAATAGTTAAATTT TAAAGGCCGAACTCTTTT TTAAT GATAGGGTTCGGCCTTTG TAGCTTAATATGGTT TERM 2239 1965547 - 1965515 - f 70 -7.7 -3.72363 | opp_overlap 1965515 1965511 TAGTTAAATTTTAAA GGCCGAACTCTTT TTTAATG ATAGGGTTCGGCC TTTGTAGCTTAATAT TERM 2240 1965515 - 1965547 + F 88 -10.6 -3.99228 | opp_overlap 1965515, overlap 1965511 TAGTTAAATTTTAAA GGCCGAACTCTTTT TTAAT GATAGGGTTCGGCC TTTGTAGCTTAATAT TERM 2241 1966748 - 1966730 - f 74 -6 -4.46112 | TGGCAGTCAAATAAA TCCCTCTA CCC TAGAGCGA AATACATGGGTAGCA TERM 2242 1969601 - 1969619 + G 82 -11.8 -3.27743 | opp_overlap 1969603, overlap 1969599 AAAGTAGGTGTTGAA TATCGTCC AAT GGACGATA TGTTGCTTCGTGGTA Shew185_1623 1967810 - 1970617 + | TonB-dependent receptor TERM 2243 1970639 - 1970660 + F 88 -8.7 -4.81851 | opp_overlap 1970633 1970639 GCACATAAATCGAAA GCCGAGC TTTAAACC GCTCGGC TTTTTACATTTAAAT TERM 2244 1970660 - 1970639 - f 77 -8.7 -3.91402 | opp_overlap 1970639, overlap 1970633 GCACATAAATCGAAA GCCGAGC TTTAAACC GCTCGGC TTTTTACATTTAAAT TERM 2245 1971396 - 1971409 + F 74 -5.2 -4.66609 | overlap 1971401 GCTAAGTGCAACTTG CGCC ATGTGC GGCG TTTTTCGCTGCCATG TERM 2246 1972325 - 1972308 - f 79 -8.5 -4.08767 | opp_overlap 1972308, overlap 1972318 TTTAGTCGCCCAAAA TGTTGAC ACAG GTCAACA TTTTGTGAAATGATG TERM 2247 1972308 - 1972325 + F 85 -8.5 -4.40804 | opp_overlap 1972308 1972318 TTTAGTCGCCCAAAA TGTTGAC ACAG GTCAACA TTTTGTGAAATGATG Shew185_1625 1972503 - 1973285 + | hypothetical protein Shew185_1626 1973285 - 1974640 + | MotA/TolQ/ExbB proton channel Shew185_1627 1974640 - 1975167 + | MotA/TolQ/ExbB proton channel TERM 2248 1975338 - 1975328 - g 75 -5.4 -4.70353 | overlap 1975285 TATAACAAACCAAAA GCTT CAC AAGC GACTTCAAAGCCTTC Shew185_1628 1975181 - 1975585 + | biopolymer transport protein ExbD/TolR Shew185_1629 1975587 - 1976207 + | TonB family protein TERM 2249 1976979 - 1976994 + G 71 -9 -3.55801 | GTTTCTTAGAGAGCG CGGGTA ACAT TACCCG TTTAGCACAATTGAT Shew185_1630 1976210 - 1977457 + | TPR repeat-containing protein TERM 2250 1977502 - 1977489 - T 79 -9.5 -3.66178 | opp_overlap 1977489 CGTTTGAATTTGAAA GCCCC GAAA GGGGC TTTTTCTTTGCTACT TERM 2251 1977489 - 1977502 + T 100 -9.5 -5.34309 | opp_overlap 1977489 CGTTTGAATTTGAAA GCCCC GAAA GGGGC TTTTTCTTTGCTACT Shew185_1631 1978042 - 1977533 - | diguanylate cyclase TERM 2252 1978333 - 1978357 + G 85 -10.1 -4.08394 | opp_overlap 1978352, overlap 1978322 TCTACGCCACCTTTG TCGGCGTTA ATGACTA TAACGCCGA TTTTGGCGGGGATCT TERM 2253 1979579 - 1979596 + G 71 -7.1 -4.10453 | TGAGATGGGCTTGTT TACTGAT CCTT ATCAGTA TTTTGGCAAGCTTTC Shew185_1632 1978122 - 1979951 + | hypothetical protein Shew185_1633 1980123 - 1980401 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2254 1980435 - 1980452 + F 100 -12.7 -5.58522 | opp_overlap 1980435 TACCGCTTTTTAATA CGGCAGC ATTT GCTGCCG TTTTTGTTTTATCTG TERM 2255 1980452 - 1980435 - f 84 -12.7 -3.01924 | opp_overlap 1980435 TACCGCTTTTTAATA CGGCAGC ATTT GCTGCCG TTTTTGTTTTATCTG Shew185_1634 1980485 - 1981021 + | GCN5-related N-acetyltransferase Shew185_1635 1981096 - 1981326 + | RNA-binding S4 domain-containing protein Shew185_1636 1981349 - 1981744 + | hypothetical protein TERM 2256 1981778 - 1981792 + T 93 -7.1 -5.4756 | opp_overlap 1981778 TTTGAGTCTAAAAAA CCACC TTCTT GGTGG TTTTTTATTGCCGTT TERM 2257 1981792 - 1981778 - T 86 -7.1 -5.0538 | opp_overlap 1981778 TTTGAGTCTAAAAAA CCACC TTCTT GGTGG TTTTTTATTGCCGTT Shew185_1637 1982798 - 1981911 - | LysR family transcriptional regulator TERM 2258 1983027 - 1983047 + G 81 -11.1 -3.65581 | GCAGGTTTTATCGAC GCTATCGCC GGT GGCGGTGGC TTGTTGACGATTCCT Shew185_1638 1982955 - 1983725 + | hypothetical protein Shew185_1639 1984129 - 1985274 + | nuclease SbcCD, D subunit TERM 2259 1985882 - 1985858 - g 74 -2.9 -5.08169 | gap 1 AGATACTTTAAAAAA TAAGGCTGCC GATATT AGC-GCCTTA GTGAAAGATCAACGC TERM 2260 1986070 - 1986042 - g 73 -8.2 -3.86776 | gap 1, opp_overlap 1986042 CAATTAATCATTAAA GCCAGC-GATGCC GCCC AGCATCTACTGGC TGAGTTTGCGCAGTT TERM 2261 1986662 - 1986650 - g 70 -7.7 -3.86897 | overlap 1986657 1986658 GGTATCGTCGACAAA GGCAA AAC TTGCC AATGCGAAAGCGCAA TERM 2262 1987326 - 1987314 - g 70 -7.7 -3.86684 | overlap 1987321 ATAAGCCATATTAAA CAGCA GAT TGCTG ACGTGAGGGCGCTTC TERM 2263 1987444 - 1987400 - g 87 -10.8 -4.08692 | opp_overlap 1987400 1987435, overlap 1987402 GAATGGTGCCGAAAA TACCGCTGAGGCG-GCATTAGC TCA GCAAACGCGCGCC-CAGCAGCA ACTCAATCAGCAATT TERM 2264 1987442 - 1987402 - g 81 -11.2 -3.63922 | opp_overlap 1987400 1987435, overlap 1987400 ATGGTGCCGAAAATA CCGCTGAGGCG-GCATTAGC TCA GCAAACGCGCGCC-CAGCAG CAACTCAATCAGCAA Shew185_1640 1985271 - 1988327 + | SMC domain-containing protein Shew185_1641 1988593 - 1989894 + | peptidase M23B TERM 2265 1989986 - 1989959 - T 100 -15.8 -3.18735 | opp_overlap 1989959 TGAAGAGTTTACCAA TGCCGATGAAAT GCAA ATTTCATCGGCA TTTTTGTTTCCATCA TERM 2266 1989959 - 1989986 + T 100 -15.8 -5.30616 | opp_overlap 1989959 TGAAGAGTTTACCAA TGCCGATGAAAT GCAA ATTTCATCGGCA TTTTTGTTTCCATCA Shew185_1642 1990763 - 1990269 - | hypothetical protein TERM 2267 1990550 - 1990562 + g 83 -4.1 -5.5112 | GTAATTTGGTGAGGT GCTTA CGC TGAGC TTTTTTATTCGTCAA Shew185_1643 1991339 - 1990815 - | hypothetical protein Shew185_1644 1991824 - 1991387 - | hypothetical protein Shew185_1645 1993382 - 1992027 - | DEAD/DEAH box helicase domain-containing protein TERM 2268 1993241 - 1993221 - G 77 -3.9 -5.06414 | opp_overlap 1993221 1993222, overlap 1993222 TGCGGGTAACAAAAA CGCTAAGGT TTT ACCTGAGCC TGTTTTTGATGACGC Shew185_1646 1993632 - 1994579 + | patatin TERM 2269 1994646 - 1994617 - T 90 -10.1 -4.37506 | opp_overlap 1994619, overlap 1994619 ACTATCAAATAGAAA CAGTCGGTACAAC TCGC GTTATACCGACTT TTTGCTCTCTAAAAC TERM 2270 1994619 - 1994644 + T 93 -10.5 -4.84527 | opp_overlap 1994619 1994617 TATCAAATAGAAACA GTCGGTACAAC TCGC GTTATACCGAC TTTTTGCTCTCTAAA TERM 2271 1994644 - 1994619 - T 90 -12.7 -3.78193 | opp_overlap 1994619, overlap 1994617 TATCAAATAGAAACA GTCGGTACAAC TCGC GTTATACCGAC TTTTTGCTCTCTAAA Shew185_1647 1995723 - 1994710 - | alcohol dehydrogenase TERM 2272 1995153 - 1995165 + g 73 -4.7 -4.8048 | opp_overlap 1995148 CAACACCATAGCTTT GCAGC AAT GCCGC TTTTTCATCTGAACC Shew185_1648 1995814 - 1996389 + | MarR family transcriptional regulator Shew185_1649 1996510 - 1997199 + | hypothetical protein Shew185_1650 1997459 - 1999576 + | anaerobic ribonucleoside triphosphate reductase Shew185_1651 1999654 - 2000151 + | anaerobic ribonucleotide reductase-activating protein TERM 2273 2000449 - 2000429 - g 71 -6.9 -4.23104 | TGAAAGGCCAACAAA CCCGCTTAT TGA ATAAGCAAG GTTCAGATATCAAAG Shew185_1652 2000266 - 2000622 + | hypothetical protein TERM 2274 2000644 - 2000668 + F 100 -12.9 -3.93236 | TTAGGCTGTCACTGA CACGGGATCGA GTG TCGATCGCGTG TTTGTGCGCTTAGTA Shew185_1653 2000896 - 2001510 + | GTP cyclohydrolase II TERM 2275 2002138 - 2002119 - g 77 -5 -4.86033 | AAACTTCGATAAAAA CGATAACG TTGC CATCATCG CCTCTGGGATCAGTA Shew185_1654 2001568 - 2002545 + | hypothetical protein Shew185_1655 2003099 - 2002641 - | hypothetical protein TERM 2276 2002979 - 2002996 + g 70 -9.9 -3.19271 | overlap 2002977 2002985 TGTCTTGGCTATCTT GTGAGTC AGCG GACTCAC TATTCGCTGTTTGTG TERM 2277 2003322 - 2003303 - R 72 -9.3 -3.29273 | opp_overlap 2003303, overlap 2003301 TTCATCACGACAATA CAGCCCT TATTTT AGGGCTG TTTACGTTTTATGGC TERM 2278 2003303 - 2003322 + r 83 -9.3 -3.96705 | opp_overlap 2003303 2003301 TTCATCACGACAATA CAGCCCT TATTTT AGGGCTG TTTACGTTTTATGGC Shew185_1656 2003735 - 2003352 - | hypothetical protein TERM 2279 2003870 - 2003889 + r 90 -10.7 -4.30416 | opp_overlap 2003870 GCAGTATGATCAAAA CAGGCGC AATAAA GCGCCTG TTTTAGCTTGGTCAT TERM 2280 2003889 - 2003870 - R 91 -10.7 -4.32034 | opp_overlap 2003870 GCAGTATGATCAAAA CAGGCGC AATAAA GCGCCTG TTTTAGCTTGGTCAT Shew185_1657 2005378 - 2003918 - | carbon starvation protein CstA TERM 2281 2005551 - 2005564 + r 76 -4.5 -5.14645 | opp_overlap 2005551, overlap 2005508 TATGGTTAAAAACAT GCCGT TAAG ATGGC TTTTTCTTGAGTTAT Shew185_1658 2006286 - 2005576 - | putative two-component response-regulatory protein YehT TERM 2282 2005726 - 2005714 - G 74 -9.1 -3.62756 | overlap 2005712 AGGTGAAATCAAATA CTGCC GAT GGCAG CGCACCAGTGGGGTT TERM 2283 2005729 - 2005739 + g 79 -2.4 -5.4505 | CTGCCGATGGCAGCG CACC AGT GGGG TTTTTTCTTCAAACA Shew185_1659 2007980 - 2006283 - | signal transduction histidine kinase, LytS Shew185_1660 2008109 - 2008351 + | hypothetical protein Shew185_1661 2008976 - 2008632 - | RepA domain-containing protein Shew185_1662 2009631 - 2008963 - | hypothetical protein Shew185_1663 2010010 - 2009708 - | type IV pilus assembly PilZ TERM 2284 2009964 - 2009977 + g 77 -3.8 -5.06414 | GCTTCCATGTCCACT CGCA GTGATG TGCG TTTTTCTTCAAAACC Shew185_1664 2010573 - 2010169 - | phosphate-starvation-inducible E Shew185_1665 2011884 - 2010712 - | NnrS family protein TERM 2285 2011248 - 2011222 - G 76 -8.7 -3.98204 | opp_overlap 2011221 2011240, overlap 2011212 2011240 AAAGAGACTGATAAA GCTCAGCCATT CGAGC AATGGCCGCGC AGTTTTACGCTGCCA TERM 2286 2011683 - 2011663 - G 87 -6.7 -5.10461 | CGCAGTTAATAAAAA GCCCGCGAC GAC GGCGCAGAC AAATCCGAAAATCAT TERM 2287 2011827 - 2011817 - G 83 -4.6 -5.32699 | overlap 2011825 GCAAACAGGAAAAAA GGCC GAA AGCC TAATCTGAATAAGGC Shew185_1666 2012738 - 2012229 - | hypothetical protein Shew185_1667 2012771 - 2015158 + | DNA internalization-related competence protein ComEC/Rec2 TERM 2288 2015852 - 2015840 - g 82 -10.5 -3.89336 | overlap 2015834 CTAAGCAAATTCAAA CCGCC ATG GGCGG CGTGAGTGCCACGAC TERM 2289 2016399 - 2016448 + G 71 -9.2 -3.54743 | opp_overlap 2016393 TTCAGGCAAGTCGAC TATCGCCAGTCTAGTGACCCGT TTTTAT ACGGGGCTCGAATCTGGCGATA TTCTGCTTGATGATG Shew185_1668 2015191 - 2016999 + | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA TERM 2290 2017539 - 2017577 + G 78 -8 -4.4767 | GTTGTTACCGGCAGG TCCGCTGCGTGAAGGCGC GTG GCGTCTCGATGCCGTGGA TTTTATCGTCAATAA Shew185_1669 2017000 - 2018019 + | tetraacyldisaccharide 4'-kinase Shew185_1670 2018006 - 2018185 + | hypothetical protein TERM 2291 2018189 - 2018228 + T 88 -8.6 -4.69622 | opp_overlap 2018177, overlap 2018194 2018197 2018222 GAATCAGTTTAGTCT GATGTGAATGCGCGTATT GTCT AATACGCGCATGCTTACC TTTTTAAGCTTCTCT TERM 2292 2018194 - 2018223 + T 95 -13.7 -3.45433 | overlap 2018189 2018197 2018222 AGTTTAGTCTGATGT GAATGCGCGTATT GTCT AATACGCGCATGC TTACCTTTTTAAGCT TERM 2293 2018197 - 2018220 + T 91 -14 -2.86773 | overlap 2018194 2018189 TTAGTCTGATGTGAA TGCGCGTATT GTCT AATACGCGCA TGCTTACCTTTTTAA Shew185_1671 2018811 - 2018350 - | putative lipoprotein Shew185_1672 2018944 - 2019633 + | hypothetical protein Shew185_1673 2020159 - 2019803 - | glutaredoxin TERM 2294 2020133 - 2020121 - G 71 -4.1 -4.67904 | TACGAAGTTTAAAAA CAGAA TGA TCCTG CCTAAAATCCAGCGA TERM 2295 2020437 - 2020469 + r 100 -20.8 -4.07687 | opp_overlap 2020437 2020440, overlap 2020440 CTTTAGCATAGGAAA GAAGCCCGCTAAAG CTGAA CTTTAGCGGGCTTC TTTTAGAGCAAACAT TERM 2296 2020469 - 2020437 - R 100 -21.5 -3.86202 | opp_overlap 2020437 2020440, overlap 2020440 CTTTAGCATAGGAAA GAAGCCCGCTAAAGC TGA ACTTTAGCGGGCTTC TTTTAGAGCAAACAT TERM 2297 2020440 - 2020466 + r 100 -16.7 -4.17048 | opp_overlap 2020440 2020437, overlap 2020437 TAGCATAGGAAAGAA GCCCGCTAAAG CTGAA CTTTAGCGGGC TTCTTTTAGAGCAAA TERM 2298 2020466 - 2020440 - R 100 -17.4 -4.05877 | opp_overlap 2020437 2020440, overlap 2020437 TAGCATAGGAAAGAA GCCCGCTAAAGC TGA ACTTTAGCGGGC TTCTTTTAGAGCAAA Shew185_1674 2023985 - 2020521 - | hypothetical protein TERM 2299 2020915 - 2020931 + g 76 -9.5 -3.68244 | GCACTGAACTCGATA TTGGCTA ACT TAGCCAA TTTACGCTTCATGAT TERM 2300 2021706 - 2021719 + g 74 -3.1 -5.14477 | opp_overlap 2021698 AAAGTAAGCCGAGCC TTGGC TAAA GCTAA TTTTTTGAATATCTA TERM 2301 2022634 - 2022651 + g 71 -4.1 -4.68103 | overlap 2022631 CTTGCATTAGTTGCC GTCTCAG CTAT TTGAGGC TTTTCTTCCACTTGC TERM 2302 2023572 - 2023595 + g 80 -3.8 -5.24129 | overlap 2023574 GGTCTGCAGAATATC GTCGAAGTTG AATC CAGCTTTGCC TTTTTTCTCCACGCG Shew185_1675 2024619 - 2024239 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2303 2025299 - 2025321 + G 75 -3.5 -5.14563 | gap 1, opp_overlap 2025318, overlap 2025300 AGTTTAAGGCGGGCA TTGC-TCATC TGAT GATGAAGCAG TTTTTTACTACAGAA Shew185_1676 2025052 - 2025792 + | hypothetical protein TERM 2304 2025817 - 2025833 + F 100 -12.3 -5.5112 | opp_overlap 2025817 AAGCAGCGAATAGAA TGGGAGC TTG GCTCCCA TTTTTTATTCATGCA TERM 2305 2025833 - 2025817 - f 90 -12.3 -3.70104 | opp_overlap 2025817 AAGCAGCGAATAGAA TGGGAGC TTG GCTCCCA TTTTTTATTCATGCA Shew185_1677 2025894 - 2026244 + | glyoxalase/bleomycin resistance protein/dioxygenase Shew185_1678 2026219 - 2026449 + | hypothetical protein TERM 2306 2026719 - 2026680 - T 100 -15.8 -3.74526 | opp_overlap 2026680 2026680, overlap 2026681 GTATTAATCGAATAA TCCAACGGCGTAATACGC ATTA ACGTATTTCGCCGTTGGC ATTTTGAAGCACCCT TERM 2307 2026680 - 2026720 + T 100 -13.5 -4.08064 | gap 1, opp_overlap 2026680 2026681, overlap 2026680 GTATTAATCGAATAA T-CCAACGGCGTAATACG CATTAA CGTATTTCGCCGTTGGCA TTTTGAAGCACCCTT TERM 2308 2026680 - 2026719 + T 100 -15.1 -3.04517 | opp_overlap 2026680 2026681, overlap 2026680 GTATTAATCGAATAA TCCAACGGCGTAATACG CATTAA CGTATTTCGCCGTTGGC ATTTTGAAGCACCCT TERM 2309 2026718 - 2026681 - T 100 -19.3 -2.84234 | opp_overlap 2026680 2026680, overlap 2026680 TATTAATCGAATAAT CCAACGGCGTAATACGC ATTA ACGTATTTCGCCGTTGG CATTTTGAAGCACCC Shew185_1679 2027644 - 2026754 - | cytidine deaminase TERM 2310 2027842 - 2027807 - R 90 -10.6 -4.24075 | opp_overlap 2027806 2027805 2027810, overlap 2027831 2027833 2027834 ATTCACGAATATAAA CAAGCTTAAGACTATT AAAT AAAAGACTTAAGCTTG AATTGTTCAAACTTA TERM 2311 2027862 - 2027831 - R 70 -3.2 -4.95484 | gap 1, opp_overlap 2027810 2027806 2027805, overlap 2027807 2027833 2027834 GACTATTAAATAAAA GACT-TAAGCTTGAA TTG TTCAAACTTAAAGTT CACGCAAATAATGGC TERM 2312 2027859 - 2027833 - R 75 -8.2 -4.08958 | opp_overlap 2027810 2027806 2027805, overlap 2027807 2027831 2027834 CTATTAAATAAAAGA CTTAAGCTTGAA TTG TTCAAACTTAAA GTTCACGCAAATAAT TERM 2313 2027858 - 2027834 - R 72 -9.5 -3.04291 | opp_overlap 2027810 2027806 2027805, overlap 2027807 2027833 2027831 TATTAAATAAAAGAC TTAAGCTTGAA TTG TTCAAACTTAA AGTTCACGCAAATAA Shew185_1680 2029273 - 2027855 - | exonuclease I TERM 2314 2030394 - 2030379 - R 72 -10.4 -2.6953 | overlap 2030371 2030368 2030378 TGAATTAGAAGGAAC GCCCTC TTAC GAGGGC TGGCGGGTTAGACGG Shew185_1682 2031700 - 2030741 - | integron integrase TERM 2315 2032473 - 2032495 + G 70 -9.9 -3.16668 | opp_overlap 2032473 AAGGGGCCTACGACA GGTTGGTGA TTATT TCACCGACC TTGCTCACCCTGTTG Shew185_1683 2031989 - 2032852 + | phage integrase family protein Shew185_1684 2032831 - 2033949 + | putative transposase Shew185_1685 2034301 - 2034567 + | hypothetical protein Shew185_1686 2034689 - 2034967 + | hypothetical protein TERM 2316 2035028 - 2035045 + F 72 -8.3 -3.48276 | opp_overlap 2034985 2034984 2035027 TCCGTCGCTACAAGG CGCCCGC AGCT GCTGGCG TTATGTGGCAAGGAG Shew185_1687 2035048 - 2035497 + | hypothetical protein Shew185_1688 2035535 - 2035981 + | hypothetical protein TERM 2317 2036033 - 2035977 - f 70 -8.3 -3.29325 | gap 3, opp_overlap 2035992 2035996, overlap 2035991 2035992 TTGGCACAATCAACA CGTAACAAGTCAAAGCACTCGGACGCAG CTGG CTGCG-CCG-GTG-TTTGAATCGTTAAG GCCATAATGAGAAAT TERM 2318 2035992 - 2036019 + F 73 -8.5 -3.71527 | gap 2, opp_overlap 2035992 2035991 2035977, overlap 2035996 CGTAACAAGTCAAAG CACTCGGACGCAG CTGG CTGCG-CCG-GTG TTTGAATCGTTAAGG TERM 2319 2036099 - 2036075 - g 75 -5.2 -4.77757 | gap 1, opp_overlap 2036075 2036079, overlap 2036079 GTCTAAAAATGAAAA TGAAGAACTTT CTAG AAAGTTC-TCA TTTCTGTTGAAGTAC Shew185_1689 2036040 - 2036648 + | hypothetical protein Shew185_1690 2036730 - 2037092 + | hypothetical protein Shew185_1691 2037195 - 2037560 + | hypothetical protein Shew185_1692 2037622 - 2037912 + | hypothetical protein TERM 2320 2037977 - 2037967 - f 72 -4.6 -4.74103 | overlap 2037952 CGTGCAATGCAAAAA GCGC ATT GCAC TGGACCTCGCTACGC Shew185_1693 2037972 - 2038616 + | hypothetical protein TERM 2321 2038647 - 2038617 - T 89 -9.8 -4.20367 | gap 1, opp_overlap 2038622 TCGGCTAACAAATAA GGATA-GGCCGCG CGTAGC CGCGACCTTATCC CAAGTGTTGAACAAG Shew185_1694 2039948 - 2038863 - | transposase Shew185_1695 2040835 - 2039945 - | phage integrase family protein TERM 2322 2040611 - 2040596 - G 75 -3.2 -5.04325 | overlap 2040598 GTGAAAGTAGAAAAA CTGCAA GCCG TTGCGG TCGAGTTTGACGGTG TERM 2323 2040924 - 2040936 + H 77 -10.5 -3.33696 | opp_overlap 2040933 TTTTATCTTGTTCCT GCCGC AAA GCGGC TTCGTTCAACAAGCC Shew185_1696 2041051 - 2041479 + | hypothetical protein TERM 2324 2041525 - 2041512 - f 70 -3.1 -4.84359 | gap 1, overlap 2041513 2041514 TTACGGCCACAAAAA GCGTGG CCT CCAC-C GGACGCGCTAACGCG Shew185_1697 2041937 - 2042533 + | hypothetical protein TERM 2325 2043366 - 2043406 + F 93 -5.4 -5.59962 | TAATATGGCTACAGG CATATCGTTGCATCAACC CTACA GGAGGATGCAATGACGTG TTTTTGTTTCTTTTG TERM 2326 2045061 - 2045050 - g 70 -2.2 -4.89393 | CAAATTGTATAAAAA CTGC TACC GCAA AAAAGCAAATTCCGA Shew185_1699 2045039 - 2045278 + | hypothetical protein TERM 2327 2045548 - 2045530 - g 77 -3.9 -5.16132 | TACAGCAAAACAAAA GACTATC TCGGG GATAATC TAGGCATACATCAAA Shew185_1700 2045287 - 2045667 + | hypothetical protein TERM 2328 2045673 - 2045662 - f 89 -5.8 -5.47821 | ACGTATGCAAAAAAA CGCT AATA AGCG CATGGTGTCGTACTG Shew185_1701 2045783 - 2046178 + | hypothetical protein TERM 2329 2046321 - 2046337 + T 70 -3 -5.03715 | opp_overlap 2046320 TTTTTACCATTGAAG CAGATG CAGCA CATTTG TTTTTTGACGGTGGT TERM 2330 2046416 - 2046428 + T 78 -2.7 -5.40072 | TCAAAATTTCAGACG TCATT ATC AGTGA TTTTTTTACACAAAA Shew185_1702 2047296 - 2046409 - | hypothetical protein TERM 2331 2046870 - 2046882 + g 70 -7.7 -3.91798 | opp_overlap 2046866, overlap 2046876 CCTCAAATCCAGCCT GTTGC ATG GCAAC TTTAGTTGACCATTG TERM 2332 2048236 - 2048204 - H 73 -10.1 -2.78762 | opp_overlap 2048208, overlap 2048208 ACACCACTAAGATGA TTAAGCCATTATCTT GAA AATATAACGGCTTAA TAGGTGATCTTCATT Shew185_1703 2048297 - 2049124 + | hypothetical protein TERM 2333 2049845 - 2049859 + G 74 -2.8 -5.03314 | opp_overlap 2049845 TGAACTGACAAAAAG TGATCA CAT TGCTCA TTTTTTAGAAATGAC Shew185_1704 2049165 - 2049980 + | 23S rRNA methyltransferase A Shew185_1705 2050287 - 2050496 + | cold-shock DNA-binding domain-containing protein TERM 2334 2050539 - 2050562 + T 93 -6.7 -5.38054 | opp_overlap 2050539 TAGCAATGGATTAAA GGGCTATGG TTTATT CCATGGCTC TTTTTATTTGTGCAA TERM 2335 2051155 - 2051191 + T 95 -12 -4.30987 | gap 1, opp_overlap 2051162, overlap 2051162 TTGGCGTTGAGTCGA TA-AAAAAGCCTGAATA TTGC TATTCAGGCTTTTTGTA TTTCTTATGGAAGCT TERM 2336 2051183 - 2051162 - T 100 -11.7 -5.26316 | opp_overlap 2051155 2051162 TGAGTCGATAAAAAA GCCTGAATA TTGC TATTCAGGC TTTTTGTATTTCTTA TERM 2337 2051162 - 2051183 + T 100 -11.7 -5.28414 | opp_overlap 2051162, overlap 2051155 TGAGTCGATAAAAAA GCCTGAATA TTGC TATTCAGGC TTTTTGTATTTCTTA Shew185_1706 2052790 - 2051231 - | sulphate transporter TERM 2338 2052922 - 2052905 - R 100 -11.3 -5.76237 | opp_overlap 2052905 GATAGAAATAAAAAA GCCATGC AATC GCATGGC TTTTCTGACTAACTA TERM 2339 2052905 - 2052922 + r 93 -11.3 -4.431 | opp_overlap 2052905 GATAGAAATAAAAAA GCCATGC AATC GCATGGC TTTTCTGACTAACTA Shew185_1707 2056390 - 2052944 - | ribonuclease TERM 2340 2054458 - 2054473 + g 75 -3.2 -5.09426 | gap 1, overlap 2054458 GAGCGCTTGTATTTA CC-GCTG CAT CGGCCGG TTTTTTCGAATTACG Shew185_1708 2056903 - 2057892 + | RluA family pseudouridine synthase Shew185_1709 2057915 - 2058631 + | HAD family hydrolase TERM 2341 2058629 - 2058639 + T 73 -5.4 -4.59342 | overlap 2058638 TTGCTGCAATACCTC TAGC ACT GCTA TTTATTTATGCTGAA TERM 2342 2058641 - 2058684 + T 85 -9 -4.25064 | gap 1, overlap 2058638 2058642 CTCTAGCACTGCTAT TTATTTATGCTGAAGCGGCAA TAC TTGCCGCTGC-GCATGAGTAC TTCTTTGTTACCTTT TERM 2343 2058642 - 2058683 + T 85 -12.5 -3.13412 | gap 1, overlap 2058641 2058638 TCTAGCACTGCTATT TATTTATGCTGAAGCGGCAA TAC TTGCCGCTGC-GCATGAGTA CTTCTTTGTTACCTT Shew185_1710 2059414 - 2058830 - | maf protein Shew185_1711 2059677 - 2060201 + | hypothetical protein Shew185_1712 2060218 - 2060388 + | 50S ribosomal protein L32 Shew185_1713 2060404 - 2061432 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 2344 2061526 - 2061515 - g 77 -4.4 -5.04987 | overlap 2061516 2061517 2061524 AAGATTTGGAAAAAA TGGT GGAA ACCA CTGACCAATGGATTG TERM 2345 2061891 - 2061901 + G 73 -5.4 -4.56436 | opp_overlap 2061891 ATGTGAGCCAGAGGA TCGT TCA ACGA TTATTTTATTTGGTG Shew185_1714 2061442 - 2062401 + | 3-oxoacyl-(acyl carrier protein) synthase III Shew185_1715 2062464 - 2063390 + | malonyl CoA-acyl carrier protein transacylase Shew185_1716 2063400 - 2064146 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 2346 2064228 - 2064208 - f 90 -12.7 -3.72588 | CAATTGATAGTGAAA TTTCGTGGT TAG ACCACGAAA ACTAAGCTTGCATTG TERM 2347 2064520 - 2064496 - g 73 -7.2 -4.24123 | TGAAGAAGCTGAAAA GATCACTACT GTTCA AGCAGCGATC GACTACGTTTCTAAG Shew185_1717 2064311 - 2064544 + | acyl carrier protein TERM 2348 2064583 - 2064562 - f 100 -15.9 -3.04322 | opp_overlap 2064562, overlap 2064564 CTGAATTCTTGAAGA CAGGCGGCA TTTT TGCCGCCTG TTTTTGTTTTACCCC TERM 2349 2064562 - 2064583 + F 100 -15.9 -5.45802 | opp_overlap 2064562 2064564 CTGAATTCTTGAAGA CAGGCGGCA TTTT TGCCGCCTG TTTTTGTTTTACCCC TERM 2350 2064581 - 2064564 - f 84 -12.7 -3.0782 | opp_overlap 2064562, overlap 2064562 GAATTCTTGAAGACA GGCGGCA TTTT TGCCGCC TGTTTTTGTTTTACC Shew185_1718 2064788 - 2066026 + | Beta-ketoacyl synthase TERM 2351 2066087 - 2066052 - f 79 -3.5 -5.45726 | gap 2, opp_overlap 2066063 2066080, overlap 2066063 GATAGTGCAAAAAAA CAGTGAAGAAATGCGCC TGAG GGCGCATTT-TTTA-TG GATAAAATCCATTGA TERM 2352 2066078 - 2066063 - f 89 -10.4 -4.27911 | opp_overlap 2066063, overlap 2066052 AAAACAGTGAAGAAA TGCGCC TGAG GGCGCA TTTTTTATGGATAAA TERM 2353 2066063 - 2066078 + F 100 -10.4 -5.28176 | opp_overlap 2066063 2066052 AAAACAGTGAAGAAA TGCGCC TGAG GGCGCA TTTTTTATGGATAAA Shew185_1719 2066260 - 2066628 + | hypothetical protein Shew185_1720 2066747 - 2067226 + | thioesterase superfamily protein TERM 2354 2067271 - 2067241 - f 100 -14.1 -4.13995 | opp_overlap 2067242 2067245 2067249, overlap 2067242 2067249 GCCCCATAAATTAAA TCAACAAAGGCGC TTAAG GCGCCTTTGTTGT CTCTGCCGAAAAGTG TERM 2355 2067242 - 2067270 + F 100 -18.3 -2.87211 | opp_overlap 2067241 2067242 2067249, overlap 2067245 2067249 CCCCATAAATTAAAT CAACAAAGGCGCT TAA GGCGCCTTTGTTG TCTCTGCCGAAAAGT TERM 2356 2067270 - 2067242 - f 100 -17.6 -3.07915 | opp_overlap 2067242 2067245 2067249, overlap 2067241 2067249 CCCCATAAATTAAAT CAACAAAGGCGC TTAAG GCGCCTTTGTTG TCTCTGCCGAAAAGT TERM 2357 2067245 - 2067267 + F 100 -14.2 -3.58726 | opp_overlap 2067242 2067241 2067249, overlap 2067242 2067249 CATAAATTAAATCAA CAAAGGCGCT TAA GGCGCCTTTG TTGTCTCTGCCGAAA TERM 2358 2067263 - 2067249 - f 85 -8.5 -4.42206 | opp_overlap 2067245 2067242 2067249, overlap 2067242 2067241 AATTAAATCAACAAA GGCGC TTAAG GCGCC TTTGTTGTCTCTGCC TERM 2359 2067249 - 2067263 + F 86 -9.2 -4.42974 | opp_overlap 2067249 2067242 2067241, overlap 2067245 2067242 AATTAAATCAACAAA GGCGCT TAA GGCGCC TTTGTTGTCTCTGCC TERM 2360 2067916 - 2067933 + G 73 -10.5 -3.15212 | TCGGGCGGTCAAGCG GGCGCCG AAAA TGGCGCC TTGACTGTGATGGTT Shew185_1721 2067535 - 2068410 + | 6-phosphogluconate dehydrogenase NAD-binding TERM 2361 2068444 - 2068481 + T 100 -14.9 -5.07275 | opp_overlap 2068444 TTGCACTGATAAAAA TGCCCAGTCCCGATTGC GTTG GCAAATCGGACTGGGCA TTTTTGTGTGTATCG TERM 2362 2068481 - 2068444 - T 100 -14.4 -4.87665 | opp_overlap 2068444 TTGCACTGATAAAAA TGCCCAGTCCCGA-TTGC GTTG GCAAATCGG-ACTGGGCA TTTTTGTGTGTATCG Shew185_1722 2069409 - 2068561 - | aldose 1-epimerase TERM 2363 2070728 - 2070714 - g 75 -5.7 -4.56597 | opp_overlap 2070694 2070681 TTGCTGTCGCAAAAA GCCTT TAATG AAGGC GCAAGAGCCTTAGTT Shew185_1723 2069655 - 2071445 + | acyl-CoA dehydrogenase domain-containing protein TERM 2364 2071524 - 2071507 - f 85 -8.4 -4.37734 | opp_overlap 2071507 GAGAACAACCTAAAA CCAGCG CACTGT CGCTGG TTTTTATTTTTATCC TERM 2365 2071507 - 2071524 + F 100 -8.4 -5.69262 | opp_overlap 2071507 GAGAACAACCTAAAA CCAGCG CACTGT CGCTGG TTTTTATTTTTATCC TERM 2366 2072312 - 2072324 + G 71 -4.8 -4.52589 | overlap 2072305 TGGGGTAAGGGGCGA TCCC TATTC GGGA TTTTCTGTGCCGCAA TERM 2367 2072942 - 2072930 - g 75 -3.3 -5.09204 | overlap 2072931 AGATGCCAATAAAAA GCCCA TTA TGGGT GATGGCACCATTAAG TERM 2368 2073207 - 2073197 - g 75 -3.2 -5.0916 | GCTGCAAGACAAAAA TACC GAT GGCA CTCGCGCTAACCGCT Shew185_1724 2071842 - 2074088 + | TonB-dependent siderophore receptor TERM 2369 2074136 - 2074105 - f 90 -11 -4.14739 | overlap 2074107 2074130 GCATTGATGTGAAAA CAGCTTGTTCGTTA AGGA TGACGAACAAGCTA ACCTGCCTAACCTTG TERM 2370 2074134 - 2074107 - f 88 -11.4 -3.67188 | overlap 2074105 2074130 ATTGATGTGAAAACA GCTTGTTCGTTA AGGA TGACGAACAAGC TAACCTGCCTAACCT TERM 2371 2074217 - 2074228 + F 75 -3 -5.27779 | opp_overlap 2074220, overlap 2074212 GCTAATGCTTGCACA CTAT CTTA ATAG TTTTTTCCTATTAAG TERM 2372 2074847 - 2074825 - g 82 -10.6 -3.86346 | opp_overlap 2074828, overlap 2074828 CCATTTTTGTATAAA CAAGGGGTGA AAC TCACGCCTTG GCTAACTGATAAGGC TERM 2373 2075045 - 2075063 + G 71 -7.4 -4.07885 | opp_overlap 2075037 GTAAAATTGTGGTGA TCCGCACT GTG AGTGAGGA TTTTCAGGCGCAATC Shew185_1725 2074324 - 2075466 + | patatin TERM 2374 2075560 - 2075531 - T 88 -11.5 -3.65827 | opp_overlap 2075530 2075533 2075537 2075538, overlap 2075533 2075538 TAAGCTGCATCGAAA TACAAAAGCCACC TTAG GGTGGCCTTTGTG GTTGGCTATCTTAAC TERM 2375 2075558 - 2075533 - T 100 -14.1 -3.40775 | opp_overlap 2075530 2075533 2075537 2075538, overlap 2075531 2075538 AGCTGCATCGAAATA CAAAAGCCACC TTAG GGTGGCCTTTG TGGTTGGCTATCTTA TERM 2376 2075533 - 2075558 + T 81 -11.9 -2.78868 | opp_overlap 2075533 2075531 2075538, overlap 2075530 2075537 2075538 AGCTGCATCGAAATA CAAAAGCCACC TTAG GGTGGCCTTTG TGGTTGGCTATCTTA TERM 2377 2075537 - 2075554 + T 71 -6.9 -4.07306 | opp_overlap 2075533 2075531 2075538, overlap 2075533 2075530 2075538 GCATCGAAATACAAA AGCCACC TTAG GGTGGCC TTTGTGGTTGGCTAT TERM 2378 2075553 - 2075538 - T 93 -10.4 -4.80455 | opp_overlap 2075537 2075533 2075530 2075538, overlap 2075533 2075531 CATCGAAATACAAAA GCCACC TTAG GGTGGC CTTTGTGGTTGGCTA TERM 2379 2075538 - 2075553 + T 75 -10.4 -3.03661 | opp_overlap 2075538 2075533 2075531, overlap 2075537 2075533 2075530 CATCGAAATACAAAA GCCACC TTAG GGTGGC CTTTGTGGTTGGCTA Shew185_1726 2077300 - 2075636 - | asparagine synthetase B TERM 2380 2077738 - 2077758 + r 95 -11.2 -4.9181 | opp_overlap 2077738 GCTGAAAACAAAAAA GCACGTGA ATGGC TCACGTGC TTTTTAATCTTGTCT TERM 2381 2077758 - 2077738 - R 100 -11.9 -5.79595 | opp_overlap 2077738 GCTGAAAACAAAAAA GCACGTGAA TGG CTCACGTGC TTTTTAATCTTGTCT TERM 2382 2077886 - 2077858 - R 91 -11.8 -3.9461 | overlap 2077861 GGGCGTCAATAAGAA TAAGAGACGGCT AACTA AGCCGCCTCTCA CAAGCTGTCACTGAT TERM 2383 2077883 - 2077861 - R 90 -11.3 -4.09963 | overlap 2077858 CGTCAATAAGAATAA GAGACGGCT AACTA AGCCGCCTC TCACAAGCTGTCACT Shew185_1727 2079586 - 2077910 - | peptidase M28 TERM 2384 2078241 - 2078229 - G 71 -6.9 -4.2528 | opp_overlap 2078229 2078231 2078232 TCTGAACGGAAGAAA CCGCC CGA AGCGG GATTTTTCTCACCCA TERM 2385 2078231 - 2078243 + g 77 -4.7 -4.83615 | opp_overlap 2078229, overlap 2078229 2078232 TGAACGGAAGAAACC GCCCG AAG CGGGA TTTTTCTCACCCATG TERM 2386 2078672 - 2078684 + g 71 -9.1 -3.452 | TGTGCTGCCGGGGAG CGTGG CGA CCACG TTGTAGCTATTTGCG TERM 2387 2079721 - 2079766 + r 100 -18.7 -3.06492 | gap 1, opp_overlap 2079734 2079736, overlap 2079734 2079736 TTACTTAATGTTGCT TTACCCTATGCAATACGCCT TTTGGCT AGGCGTATTGCAT-GGGTAA TGTTGGAATGGCTAG Shew185_1728 2080579 - 2079833 - | UMP phosphatase TERM 2388 2080683 - 2080702 + r 88 -10.8 -4.0162 | opp_overlap 2080683 AAATAGTTAAAAAAA TAGAGACC CTAA GGTCTCTA TTTGTGATCTCGCGA TERM 2389 2080702 - 2080683 - R 100 -10.8 -5.54264 | opp_overlap 2080683 AAATAGTTAAAAAAA TAGAGACC CTAA GGTCTCTA TTTGTGATCTCGCGA Shew185_1729 2081382 - 2080738 - | phosphoribosylglycinamide formyltransferase TERM 2390 2081118 - 2081140 + g 71 -10.6 -2.76171 | opp_overlap 2081124, overlap 2081115 2081122 TCCGCATAAATCCTG CCAACACGAT TAA ATCGGGTTGG TACTGTTCGATGACT Shew185_1730 2082419 - 2081382 - | phosphoribosylaminoimidazole synthetase TERM 2391 2082974 - 2082961 - g 76 -2.3 -5.22943 | ATCAAAGGTAAAAAA GTCAC TGTT GTGCC GATTTTACGTGCGGG Shew185_1731 2082751 - 2083377 + | uracil phosphoribosyltransferase TERM 2392 2083446 - 2083473 + F 100 -10.6 -5.63517 | opp_overlap 2083452, overlap 2083452 TTGAGCGGATGTACT CAGTAAGGGAGC CTAG GCTCCCTTTTTG TTTTTTGTTTGCCAC TERM 2393 2083452 - 2083467 + F 100 -10.4 -5.84011 | opp_overlap 2083452, overlap 2083446 GGATGTACTCAGTAA GGGAGC CTAG GCTCCC TTTTTGTTTTTTGTT TERM 2394 2083467 - 2083452 - f 75 -10.4 -3.18912 | opp_overlap 2083446 2083452 GGATGTACTCAGTAA GGGAGC CTAG GCTCCC TTTTTGTTTTTTGTT TERM 2395 2084640 - 2084630 - g 73 -5.4 -4.52415 | ACCTACAATAAGAAA GTCT ATG AGAC CACGCTGTTTGATGT TERM 2396 2084892 - 2084908 + G 78 -5.7 -4.74453 | overlap 2084894 AACATTTACGTCAAG CGGTCGC AGA GCGGCAG TTTTTAAATGTGTTG Shew185_1732 2083649 - 2085055 + | diguanylate cyclase TERM 2397 2085168 - 2085204 + T 77 -8 -4.24745 | opp_overlap 2085175, overlap 2085172 2085175 2085177 AGTTGCAGCCGGCAA TAAAAAACAGCGCGGA GAATG TCCGCGCTGTCGTTAA TTTCTATTACTGCTA TERM 2398 2085172 - 2085200 + T 73 -8.8 -3.69943 | opp_overlap 2085175, overlap 2085168 2085175 2085177 GCAGCCGGCAATAAA AAACAGCGCGGA GAATG TCCGCGCTGTCG TTAATTTCTATTACT TERM 2399 2085175 - 2085197 + T 100 -14.9 -2.93941 | opp_overlap 2085175, overlap 2085172 2085168 2085177 GCCGGCAATAAAAAA CAGCGCGGA GAATG TCCGCGCTG TCGTTAATTTCTATT TERM 2400 2085197 - 2085175 - T 100 -14.9 -5.4505 | opp_overlap 2085172 2085168 2085175 2085177 GCCGGCAATAAAAAA CAGCGCGGA GAATG TCCGCGCTG TCGTTAATTTCTATT TERM 2401 2085177 - 2085195 + T 82 -11.7 -3.00667 | opp_overlap 2085175, overlap 2085175 2085172 2085168 CGGCAATAAAAAACA GCGCGGA GAATG TCCGCGC TGTCGTTAATTTCTA Shew185_1733 2086559 - 2085240 - | Na+/H+ antiporter NhaC Shew185_1734 2086948 - 2087553 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2402 2087615 - 2087587 - T 90 -13.3 -2.71791 | opp_overlap 2087587 2087594, overlap 2087594 AGTCGCCTGTTAAAT GAAAAAAGCTGCC AAT GGCAGCTTTTTTG TTTTTAAATGGCTTA TERM 2403 2087587 - 2087615 + T 100 -13.3 -4.68424 | opp_overlap 2087587 2087594, overlap 2087594 AGTCGCCTGTTAAAT GAAAAAAGCTGCC AAT GGCAGCTTTTTTG TTTTTAAATGGCTTA TERM 2404 2087594 - 2087608 + T 100 -11.4 -5.93252 | opp_overlap 2087594 2087587, overlap 2087587 TGTTAAATGAAAAAA GCTGCC AAT GGCAGC TTTTTTGTTTTTAAA TERM 2405 2087608 - 2087594 - T 100 -11.4 -5.37593 | opp_overlap 2087587 2087594, overlap 2087587 TGTTAAATGAAAAAA GCTGCC AAT GGCAGC TTTTTTGTTTTTAAA Shew185_1735 2088325 - 2087654 - | ribonuclease T Shew185_1736 2088467 - 2089336 + | OmpA/MotB domain-containing protein TERM 2406 2089389 - 2089415 + F 100 -14.6 -3.02745 | opp_overlap 2089392, overlap 2089387 2089392 TAGTTAAGCCCAATC CAATGTCAAGTC ACT GACTTGGCATTG TCATTTATAGATGCG TERM 2407 2089392 - 2089412 + F 80 -10.5 -3.65317 | opp_overlap 2089392, overlap 2089389 2089387 TTAAGCCCAATCCAA TGTCAAGTC ACT GACTTGGCA TTGTCATTTATAGAT TERM 2408 2089684 - 2089664 - f 100 -15.5 -5.97575 | AATGGATAAAAAAAA GCCCGCTTA AAC TAAGCGGGC CGCAAAAATAATGCA TERM 2409 2089776 - 2089754 - f 73 -7 -4.23045 | opp_overlap 2089754 GAACCAGGGAAGAAA CTGAAGTGTT GGG AACACACCAG TTTAAAAGTTCTTTG TERM 2410 2090052 - 2090068 + F 88 -2.9 -5.98781 | opp_overlap 2090055 AATCTTCTTATTAAG TTACGGC ATT GCCATGA TTTTTTTTGCTTGTA TERM 2411 2090155 - 2090169 + G 83 -10 -4.24342 | GGCATTAAGATTTCG CCTTGC AAA GCAAGG TTTGTTAGTGGCCAC Shew185_1737 2090138 - 2092321 + | prolyl oligopeptidase TERM 2412 2092335 - 2092362 + F 73 -7 -4.19238 | opp_overlap 2092340, overlap 2092340 AACTAACTATGTTAA TAAAATGGGGTC CTTT GACCCCATTGTC TTTTACAATTGCCCC TERM 2413 2092357 - 2092340 - f 95 -11.3 -4.66318 | opp_overlap 2092335 2092340 ACTATGTTAATAAAA TGGGGTC CTTT GACCCCA TTGTCTTTTACAATT TERM 2414 2092340 - 2092357 + F 90 -11.3 -3.97108 | opp_overlap 2092340, overlap 2092335 ACTATGTTAATAAAA TGGGGTC CTTT GACCCCA TTGTCTTTTACAATT Shew185_1738 2092493 - 2092894 + | Pol-Pal system-associated acyl-CoA thioesterase TERM 2415 2093261 - 2093249 - g 74 -6.3 -4.35524 | opp_overlap 2093243, overlap 2093243 TCGCGAAATGGAAAA GTTAG AAG CTAAC TTACCCTTATTAGCG Shew185_1739 2092884 - 2093570 + | Tol-Pal system TolQ TERM 2416 2093749 - 2093763 + G 79 -11.4 -3.17723 | opp_overlap 2093749 ACCTGCTGACAGTAA GCCACC TGT GGTGGC TTCGATTGACGGTGA TERM 2417 2093763 - 2093749 - g 79 -11.4 -3.25942 | opp_overlap 2093749 ACCTGCTGACAGTAA GCCACC TGT GGTGGC TTCGATTGACGGTGA Shew185_1740 2093570 - 2094004 + | biopolymer transport TolR TERM 2418 2095031 - 2094999 - g 75 -5.7 -4.49958 | opp_overlap 2095009 ACTTGATGAAAGAAA TTAACTTAATCGTTG AAC CAACGTTTTAATTAA AGGAGTCCCATGAGA Shew185_1741 2094005 - 2095027 + | Tol-Pal system TolA TERM 2419 2095009 - 2095021 + F 80 -7.7 -4.4078 | opp_overlap 2094999 AGAAATTAACTTAAT CGTTG AAC CAACG TTTTAATTAAAGGAG Shew185_1742 2095041 - 2096369 + | beta-propeller repeat-containing to-pal system protein TolB TERM 2420 2096906 - 2096938 + G 71 -5 -4.58773 | gap 1, opp_overlap 2096914 TTGATTTTTCTCGCA CTG-ATGAAGGTTTT GGCA AAAACCGTCGTGCAG TTTTAGTTTACTAAG Shew185_1743 2096416 - 2096952 + | peptidoglycan-associated lipoprotein TERM 2421 2097005 - 2097053 + G 76 -11 -3.18737 | gap 1, overlap 2097003 2097016 TCTTAATTACGGCAA TGTTCC-TTGGTGCGGGTGCTGC AGTT GCAGCACCTGCTCCTGTGGAAGA TATTGCTGGTGGTTC TERM 2422 2097016 - 2097041 + G 100 -16.9 -2.62735 | overlap 2097005 2097003 GCAATGTTCCTTGGT GCGGGTGCTGC AGTT GCAGCACCTGC TCCTGTGGAAGATAT Shew185_1744 2096977 - 2097726 + | Tol-Pal system YbgF TERM 2423 2097753 - 2097739 - f 75 -2.8 -5.32565 | opp_overlap 2097739, overlap 2097732 2097731 TAATTAACTAAAAAA CATACT CTT AGTCTG TTTTTCATGCAAACG TERM 2424 2099323 - 2099333 + G 83 -8.2 -4.54727 | GTGGATTTTCAAGCT CGCG AAA CGCG TTTTAATTTCAAAGC Shew185_1745 2099080 - 2100243 + | porin TERM 2425 2100289 - 2100273 - T 100 -12.3 -4.96106 | opp_overlap 2100273 GATAAATACTAAAAA GGAGACC TTA GGTCTCC TTTTGCATTAAGCGG TERM 2426 2100273 - 2100289 + T 100 -12.3 -4.27316 | opp_overlap 2100273 GATAAATACTAAAAA GGAGACC TTA GGTCTCC TTTTGCATTAAGCGG Shew185_1746 2100583 - 2100323 - | glutaredoxin 1 Shew185_1747 2102398 - 2100644 - | type III restriction protein res subunit TERM 2427 2102115 - 2102140 + g 78 -5.4 -4.88407 | gap 1, overlap 2102093 GCCGATTGAATGCTG GCGAC-GACGG TTTTT CCGTCAGTGGC TTTTTGATTGAGTCC TERM 2428 2102482 - 2102463 - R 100 -9.3 -5.85178 | AACAGGTAAAAAAAA TGCCCCT GGTTGG AGGGGCA AGCTAGAGAAAGGAG TERM 2429 2102565 - 2102593 + r 77 -10.4 -3.34947 | overlap 2102560 2102592 GGGAGGTTCAGGTTA CGCTTAGCCTAT TGGGC ATAGACTAAGCG TTGTGGACGTTATTC Shew185_1748 2104573 - 2102621 - | acetyl-CoA synthetase TERM 2430 2104893 - 2104906 + G 71 -4.5 -4.57341 | overlap 2104883 GCTTAGCGGTCTACT GCTCT TCGT GGAGC TTTTTAGGCACAGTT TERM 2431 2104937 - 2104947 + G 75 -3.2 -5.08011 | GGCCAATCGGCTAAG GATC TCT GGTC TTTTTTACCGATTTT Shew185_1749 2104748 - 2108188 + | integral membrane sensor hybrid histidine kinase TERM 2432 2108261 - 2108232 - T 83 -7.1 -4.66163 | opp_overlap 2108232 2108233 2108235, overlap 2108233 2108235 AGCTTCACCCAAAAA GCATCAGCCAGGG TTAA CCGTGGCTGATAA GTTGTGGCTCGGCAC TERM 2433 2108260 - 2108233 - T 80 -10.6 -3.39216 | opp_overlap 2108232 2108233 2108235, overlap 2108232 2108235 GCTTCACCCAAAAAG CATCAGCCAGGG TTAA CCGTGGCTGATA AGTTGTGGCTCGGCA TERM 2434 2108258 - 2108235 - T 79 -11 -3.26405 | opp_overlap 2108232 2108233 2108235, overlap 2108233 2108232 TTCACCCAAAAAGCA TCAGCCAGGG TTAA CCGTGGCTGA TAAGTTGTGGCTCGG TERM 2435 2108235 - 2108258 + T 76 -11 -2.6063 | opp_overlap 2108235 2108233 2108232, overlap 2108232 2108233 TTCACCCAAAAAGCA TCAGCCAGGG TTAA CCGTGGCTGA TAAGTTGTGGCTCGG Shew185_1750 2109627 - 2108245 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 2436 2108398 - 2108379 - G 74 -9.3 -3.65656 | GCATGATATAGATAA GGTTCGC GAAGGG GCGAACC CACACCCCTAAATCA TERM 2437 2109400 - 2109414 + g 80 -6.4 -4.66163 | opp_overlap 2109388 AAACATCACATGGCT CAGTTG ATG CAGCTG TTTTTCCATCGCGGT Shew185_1751 2109750 - 2110802 + | biotin synthase TERM 2438 2110852 - 2110891 + F 95 -12.9 -3.71487 | overlap 2110853 TGGATAACATGTCAA TCCTGTTGGTCGTAGTC TGTTTT GACTGCGGCCGACAGGC TTATTAAATGTGCTC TERM 2439 2110853 - 2110890 + F 100 -16.4 -2.8241 | overlap 2110852 GGATAACATGTCAAT CCTGTTGGTCGTAGTC TGTTTT GACTGCGGCCGACAGG CTTATTAAATGTGCT TERM 2440 2111591 - 2111615 + G 73 -8.6 -3.86015 | ATGGACGGAGATTGT GCGCCGAT TTTTGAGTT ATCGGCGC TTTGTCGCCAACATC Shew185_1752 2111012 - 2112232 + | 8-amino-7-oxononanoate synthase Shew185_1753 2112297 - 2113400 + | methyltransferase type 11 Shew185_1754 2113579 - 2114319 + | dithiobiotin synthetase TERM 2441 2114341 - 2114353 + T 77 -10.5 -3.34629 | opp_overlap 2114336 2114335, overlap 2114334 CCTAACTAATGTTTA GCCGC TGA GCGGC TTAATGCTTTCATCT TERM 2442 2114402 - 2114427 + T 75 -7.7 -4.0371 | opp_overlap 2114402, overlap 2114405 ATTTAGACAAAAAAA TAAGCCTCA CATTACGT TGAGGCTTA TTTATATCAAGGCTA TERM 2443 2114427 - 2114402 - T 100 -7.7 -5.72616 | gap 1, opp_overlap 2114402 2114405 ATTTAGACAAAAAAA TAAGCCTC-ACA TTA CGTTGAGGCTTA TTTATATCAAGGCTA Shew185_1755 2114769 - 2114494 - | histone family protein DNA-binding protein TERM 2444 2114994 - 2114963 - R 100 -17.5 -4.18197 | opp_overlap 2114954 AGGGCTGAGTTAAAA GGCTTAAGCGCAA GGCGTG TTGCGCTTAAGCC ATGAGTAACACTATT TERM 2445 2115015 - 2115035 + r 70 -8.3 -3.36515 | opp_overlap 2115015 2115013 2115005 2115030, overlap 2115013 TAACACTATTTAACA GCTGGCT GATGAGA AGCCAGC TCTTTAAAGCTCGGC Shew185_1756 2115961 - 2115050 - | ABC transporter related TERM 2446 2115844 - 2115829 - G 78 -5.4 -4.88711 | gap 1, opp_overlap 2115828 ATAACAGACTAAAAA GCGTGGT TTT ACC-CGC GCCATTTGGACCGAC Shew185_1757 2116788 - 2115958 - | hypothetical protein TERM 2447 2116452 - 2116439 - G 73 -2.3 -5.03314 | CGTATGGTTAAAAAA CGCAG CGTG CCACG GGTTTTATCGGAGGA TERM 2448 2116894 - 2116872 - R 80 -10.7 -3.35015 | opp_overlap 2116872 TGAATTAGTCCATAA GTGCCATTT TGCCC AAATGGCAC TTTATTCAATCGGTT TERM 2449 2116872 - 2116894 + r 90 -10.7 -4.21631 | opp_overlap 2116872 TGAATTAGTCCATAA GTGCCATTT TGCCC AAATGGCAC TTTATTCAATCGGTT Shew185_1758 2117698 - 2117027 - | hypothetical protein TERM 2450 2117566 - 2117580 + g 85 -5.6 -5.26875 | CGCTAAGTTCGAGTA CCGGCT CGC GGCTGG TTTTTTGATTGCAGG TERM 2451 2117704 - 2117761 + r 85 -11.5 -3.35996 | gap 1, opp_overlap 2117718, overlap 2117714 2117718 TGAGTTCCATATAAG CTCCAAAGA-AAAAAGCATGGCTTTGTT TAT AACAGAGCCATGCTTAATATCCTAGGAG TTGTCAGTCAAACTC TERM 2452 2117746 - 2117718 - R 100 -14.7 -5.63517 | opp_overlap 2117714 2117718 2117704 GCTCCAAAGAAAAAA GCATGGCTTTGTT TAT AACAGAGCCATGC TTAATATCCTAGGAG TERM 2453 2117718 - 2117746 + r 100 -16.9 -3.29471 | opp_overlap 2117718, overlap 2117714 2117704 GCTCCAAAGAAAAAA GCATGGCTTTGTT TAT AACAGAGCCATGC TTAATATCCTAGGAG Shew185_1759 2118674 - 2117832 - | hypothetical protein TERM 2454 2117898 - 2117909 + g 85 -5.8 -5.01732 | opp_overlap 2117898, overlap 2117907 ACCATTCTTAAATAA GCCA CCTA TGGC TTTTTTGAAGGCCTT TERM 2455 2117907 - 2117922 + g 75 -5.4 -4.77036 | opp_overlap 2117898, overlap 2117898 AAATAAGCCACCTAT GGCTTT TTTG AAGGCC TTTTTGCTCATACCA TERM 2456 2118177 - 2118158 - G 74 -10 -3.53012 | opp_overlap 2118158 CTTCGTTTTCGTAAA TCACGCCC CAAT GGGCATGA TTAATAATGGCTTTG Shew185_1760 2119391 - 2119543 + | hypothetical protein TERM 2457 2119924 - 2119906 - f 71 -9.6 -2.77899 | opp_overlap 2119905 2119909 2119918, overlap 2119909 TTGCGGCATTAAGTA GAAGGTGA AAT CCACCTTC GTGTATGTCAGGTAA TERM 2458 2120160 - 2120147 - g 74 -3.1 -5.09225 | ACCGGATCCAAAAAA TCCTG ATTA CAAGA TTGGCTTAAATGAGC Shew185_1761 2120031 - 2121944 + | arginine decarboxylase TERM 2459 2121980 - 2122003 + F 100 -14 -5.04601 | opp_overlap 2121980 GTGTGTTAAAATAAA TCAGCCTAAG GTCA CTTAGGCTGA TTTTTGCTTTCTGGA TERM 2460 2122003 - 2121980 - f 100 -14 -4.64861 | opp_overlap 2121980 GTGTGTTAAAATAAA TCAGCCTAAG GTCA CTTAGGCTGA TTTTTGCTTTCTGGA Shew185_1762 2122108 - 2123049 + | adenosylmethionine decarboxylase Shew185_1763 2123078 - 2123716 + | pyridoxamine 5'-phosphate oxidase Shew185_1764 2123789 - 2124241 + | hypothetical protein Shew185_1765 2124397 - 2124972 + | YceI family protein TERM 2461 2125058 - 2125077 + F 91 -12.2 -4.00934 | opp_overlap 2125061, overlap 2125061 GCTGGATCTCGATGA GAAGCCGA ACTT TCGGCTTC TTTGATATTTCCGAT TERM 2462 2125061 - 2125074 + F 75 -8.1 -4.12133 | opp_overlap 2125061, overlap 2125058 GGATCTCGATGAGAA GCCGA ACTT TCGGC TTCTTTGATATTTCC Shew185_1766 2125149 - 2125505 + | hypothetical protein Shew185_1767 2125988 - 2126350 + | hypothetical protein Shew185_1768 2128997 - 2126361 - | multi-sensor signal transduction histidine kinase TERM 2463 2126806 - 2126788 - G 73 -10.3 -3.17891 | opp_overlap 2126786, overlap 2126786 AACAAACCTAAGAGA TGGCGCA TAAAT TGCGCCA GATGTAATGGACGAA TERM 2464 2127049 - 2127061 + g 74 -6.3 -4.47217 | overlap 2127059 AGATTGAGTTGATGA TGCTT CTC AAGCA TTTTAGTTAATGCTT TERM 2465 2127661 - 2127676 + g 70 -7.6 -3.80014 | CGCGACAGGAATGTC TTGGCT AATA AGCCAA TTTCGTCGTGACTGT TERM 2466 2129159 - 2129141 - R 100 -11.7 -5.08088 | opp_overlap 2129141 AATCGCTAATAAAAA GGCAGGG TTGAT CCCTGCC TTATCTCAAAGTCGT TERM 2467 2129141 - 2129159 + r 89 -11.7 -3.49653 | opp_overlap 2129141 AATCGCTAATAAAAA GGCAGGG TTGAT CCCTGCC TTATCTCAAAGTCGT Shew185_1769 2129713 - 2129174 - | disulphide bond formation protein DsbB TERM 2468 2129744 - 2129726 - R 100 -6.7 -5.5353 | gap 1, opp_overlap 2129726 CATATCAACAAAAAA CGCCCTCA GACA TG-GGGCG TTTTTTGGACTCTAC TERM 2469 2129726 - 2129744 + r 85 -6.7 -5.07567 | gap 1, opp_overlap 2129726 CATATCAACAAAAAA CGCCCTCA GACA TG-GGGCG TTTTTTGGACTCTAC Shew185_1770 2131392 - 2129791 - | sodium/proton antiporter Shew185_1771 2131694 - 2132410 + | fatty acid metabolism regulator TERM 2470 2132481 - 2132451 - T 100 -15.6 -3.3539 | opp_overlap 2132456, overlap 2132456 ATAGCGATAAATACA CAAAAGCCGTTTCC AAT GGAAACGGCTTTTT TATTCGGTTTATTAT TERM 2471 2132476 - 2132456 - T 100 -15.5 -4.76423 | opp_overlap 2132456, overlap 2132451 GATAAATACACAAAA GCCGTTTCC AAT GGAAACGGC TTTTTTATTCGGTTT TERM 2472 2132456 - 2132476 + T 100 -15.5 -5.52096 | opp_overlap 2132456 2132451 GATAAATACACAAAA GCCGTTTCC AAT GGAAACGGC TTTTTTATTCGGTTT Shew185_1772 2134019 - 2132493 - | hypothetical protein Shew185_1773 2135303 - 2134029 - | hypothetical protein TERM 2473 2135164 - 2135201 + g 100 -3.3 -6.08342 | gap 1, overlap 2135165 TCGCCTTTATCTACA TCCGTTA-CGCTGCGGCG AGT CACTGCATCGCTGACGGC TTTTTTTATTTGTTG TERM 2474 2135165 - 2135200 + g 71 -6.8 -4.21345 | gap 1, overlap 2135164 CGCCTTTATCTACAT CCGTTA-CGCTGCGGCG AGT CACTGCATCGCTGACGG CTTTTTTTATTTGTT TERM 2475 2135342 - 2135322 - R 83 -11.9 -3.1319 | opp_overlap 2135321 CCAAAACCCAGCGAA GGCTTTGGC AAC ACCAAAGCC CTGTACTTAGTTAGC Shew185_1774 2137298 - 2135364 - | putative serine protein kinase, PrkA TERM 2476 2136229 - 2136239 + g 77 -8.2 -4.2828 | opp_overlap 2136223 TCTAAGGTACCTGGC GCGC AGG GCGC TTTTGATAACTCAGA TERM 2477 2136335 - 2136348 + g 73 -4.5 -4.74161 | CGATGTAAACACGGT CGAGG AAGG CTTCG TTGTTTTTGTTGTTT TERM 2478 2137512 - 2137526 + r 83 -7.1 -4.74801 | opp_overlap 2137512 GGGGGCATAAAAAAA GAGCC ACTAG GGCTC TTTTTACTGGGATTA TERM 2479 2137526 - 2137512 - R 100 -7.1 -5.60993 | opp_overlap 2137512 GGGGGCATAAAAAAA GAGCC ACTAG GGCTC TTTTTACTGGGATTA Shew185_1775 2138169 - 2137585 - | superoxide dismutase TERM 2480 2137759 - 2137782 + g 82 -5.2 -5.08824 | overlap 2137761 AGCATTGCTAGTGTT GACGATAGCA AGTG TGCCATCGGC TTTTTTCACTAACCA Shew185_1776 2138394 - 2138726 + | glutaredoxin-like protein TERM 2481 2138761 - 2138786 + T 100 -13.3 -5.30686 | opp_overlap 2138761 AGTATTAATGAAAAA GCCGCCATGAT TAAT ATCACGGCGGC TTTTTTGTCGCTGTT TERM 2482 2138786 - 2138761 - T 100 -15.5 -4.90869 | opp_overlap 2138761 AGTATTAATGAAAAA GCCGCCATGAT TAAT ATCACGGCGGC TTTTTTGTCGCTGTT Shew185_1777 2140123 - 2138873 - | uracil-xanthine permease Shew185_1778 2140340 - 2141431 + | hypothetical protein TERM 2483 2141440 - 2141472 + F 93 -7.8 -5.37171 | gap 2, overlap 2141441 2141442 ACCTTAAGATGTTAT C-G-GCCGTGCTTAGC CAT GCTAAGCGCGGCATTG TTTTTATTTGATATT TERM 2484 2141441 - 2141469 + F 100 -15.3 -4.74052 | overlap 2141440 2141442 CCTTAAGATGTTATC GGCCGTGCTTAGC CAT GCTAAGCGCGGCA TTGTTTTTATTTGAT TERM 2485 2141442 - 2141468 + F 100 -18.8 -3.41991 | overlap 2141441 2141440 CTTAAGATGTTATCG GCCGTGCTTAGC CAT GCTAAGCGCGGC ATTGTTTTTATTTGA Shew185_1779 2141499 - 2142209 + | DNA replication initiation factor TERM 2486 2142396 - 2142371 - T 100 -11.2 -5.49809 | gap 1, opp_overlap 2142371 TAAAGCCCAAAAAAA GCCCGTCATGC TGAAT GCA-GACGGGC TTTTTGTTTATCTAA TERM 2487 2142371 - 2142396 + T 100 -11.2 -5.42975 | gap 1, opp_overlap 2142371 TAAAGCCCAAAAAAA GCCCGTCATGC TGAAT GCA-GACGGGC TTTTTGTTTATCTAA Shew185_1780 2144379 - 2142424 - | hypothetical protein TERM 2488 2143668 - 2143682 + g 71 -9.2 -3.61398 | opp_overlap 2143657, overlap 2143669 AATACTGCGAGCTGA TCGCCG GCG CGGCGG TTGTTAGCACAAAAG TERM 2489 2143669 - 2143681 + g 71 -10.5 -2.76696 | opp_overlap 2143657, overlap 2143668 ATACTGCGAGCTGAT CGCCG GCG CGGCG GTTGTTAGCACAAAA TERM 2490 2144686 - 2144657 - R 100 -12.9 -5.00895 | opp_overlap 2144656 GTTACGATATAAAAA TGCCGTCATACCC AGTA AGGTAAGACGGCA CTGATATCACATTGT Shew185_1781 2145086 - 2144712 - | hypothetical protein Shew185_1782 2145488 - 2145138 - | arsenate reductase TERM 2491 2145577 - 2145547 - R 82 -4 -5.5208 | gap 1, opp_overlap 2145571, overlap 2145549 TGATAACAGAAAAAA CA-GCGCCCCG TGAGTGTGTT CGGGGCGCATA AATGGGCTATTAAGT TERM 2492 2145574 - 2145549 - R 90 -10.4 -4.38219 | opp_overlap 2145571, overlap 2145547 ATAACAGAAAAAACA GCGCCCCG TGAGTGTGTT CGGGGCGC ATAAATGGGCTATTA Shew185_1783 2147086 - 2145617 - | peptidase M48 Ste24p Shew185_1784 2147200 - 2147433 + | SirA family protein TERM 2493 2147893 - 2147907 + G 76 -11.4 -2.87988 | opp_overlap 2147892 AAAGTGGGCATTAAT CGCACC GCT GGTGCG TCCTTAGTTATCGTG Shew185_1785 2147698 - 2148780 + | hypothetical protein Shew185_1786 2149341 - 2149691 + | cytochrome c3 TERM 2494 2149739 - 2149762 + T 100 -15.4 -4.98255 | opp_overlap 2149739 TCAAGTCTAAACAAA TAACGCCAGC AAAT GCTGGCGTTA TTTTTATCATTAAAC TERM 2495 2149762 - 2149739 - T 100 -15.4 -4.46233 | opp_overlap 2149739 TCAAGTCTAAACAAA TAACGCCAGC AAAT GCTGGCGTTA TTTTTATCATTAAAC Shew185_1787 2150531 - 2149785 - | cytochrome B561 Shew185_1788 2150829 - 2151464 + | response regulator receiver protein TERM 2496 2151576 - 2151599 + T 100 -11.8 -5.06816 | opp_overlap 2151576 2151581, overlap 2151574 2151581 TTATCTCAGAAATGA TAAAAGGGGC TTTT GCCCCTTTTG TTTTTCTTAAAACCT TERM 2497 2151599 - 2151576 - T 72 -9.6 -3.01918 | opp_overlap 2151574 2151576 2151581, overlap 2151581 TTATCTCAGAAATGA TAAAAGGGGC TTTT GCCCCTTTTG TTTTTCTTAAAACCT TERM 2498 2151581 - 2151594 + T 100 -9.5 -5.42605 | opp_overlap 2151576 2151581, overlap 2151574 2151576 TCAGAAATGATAAAA GGGGC TTTT GCCCC TTTTGTTTTTCTTAA TERM 2499 2151594 - 2151581 - T 91 -9.5 -4.64846 | opp_overlap 2151574 2151581 2151576, overlap 2151576 TCAGAAATGATAAAA GGGGC TTTT GCCCC TTTTGTTTTTCTTAA TERM 2500 2151639 - 2151627 - T 74 -6.3 -4.4078 | CCTGTCTAATCAAAA CGTTA AAT TAACG TCCTAACCAAGCCGC Shew185_1789 2153400 - 2151634 - | peptidase M61 domain-containing protein TERM 2501 2153117 - 2153105 - G 71 -9.1 -3.53012 | TGGGTTGTGTCCAAA TGCGC AGT GCGCA CCGACAGATCCCAAG TERM 2502 2153465 - 2153451 - H 73 -5.6 -4.57569 | CCATGCTGCCAAAAA TGCCTG CAA CTGGCA AATGAAAAGCAAAAT Shew185_1790 2153545 - 2153901 + | histidine triad (HIT) protein TERM 2503 2153922 - 2153945 + G 70 -8 -3.92373 | AATTCGGATTTTTTC CCGCTGACCC AAAT GGCGCAGCGG TTTGTGGATCAACTC Shew185_1791 2153898 - 2154425 + | thioesterase superfamily protein Shew185_1792 2154412 - 2154909 + | thioesterase superfamily protein TERM 2504 2155008 - 2155024 + G 83 -9.4 -4.40358 | opp_overlap 2155005 2155008 TTTAATGGGAAATGA TGCGCG CTGGC CGCGCA TTTTGTCGCGTGACT Shew185_1793 2154997 - 2155446 + | hypothetical protein TERM 2505 2155468 - 2155484 + F 100 -12.3 -5.1417 | opp_overlap 2155468 AGTTTGCCCTGAGAA TGCCAGC TAT GCTGGCA TTTTTCATTTTATGA TERM 2506 2155484 - 2155468 - f 87 -12.3 -3.28791 | opp_overlap 2155468 AGTTTGCCCTGAGAA TGCCAGC TAT GCTGGCA TTTTTCATTTTATGA TERM 2507 2155959 - 2155948 - g 76 -2.2 -5.27923 | CAAGCTTAGAAAAAA TGCC TTCC AGCA TTACCGTTATCGACA TERM 2508 2155994 - 2155984 - g 77 -4 -5.1287 | overlap 2155991 TCGACAGCCAAAAAA TTCA AGA TGAA AGCGCGCAGCACTTT Shew185_1794 2155719 - 2157953 + | TonB-dependent receptor Shew185_1795 2158060 - 2158320 + | hypothetical protein Shew185_1796 2158367 - 2159020 + | nicotinamide mononucleotide transporter PnuC Shew185_1797 2159020 - 2160174 + | aminoglycoside phosphotransferase Shew185_1798 2160321 - 2161193 + | hypothetical protein TERM 2509 2161246 - 2161203 - f 83 -10.6 -3.74693 | gap 1, opp_overlap 2161194 2161205, overlap 2161205 GCCTAGGCCATGAAA GATTTATTGGCTTGCTAGG GTCTATT CCT-GCAAGCCAATAAATT AGTCAAAGAGAGACA TERM 2510 2161205 - 2161244 + F 93 -13.9 -3.14132 | gap 1, opp_overlap 2161205 2161203, overlap 2161194 CTAGGCCATGAAAGA TTTATTGGCTTGCTAGGG TCTAT TCCT-GCAAGCCAATAAA TTAGTCAAAGAGAGA TERM 2511 2161244 - 2161205 - f 95 -13.2 -3.4582 | gap 1, opp_overlap 2161194 2161205, overlap 2161203 CTAGGCCATGAAAGA TTTATTGGCTTGCTAGG GTCTATT CCT-GCAAGCCAATAAA TTAGTCAAAGAGAGA Shew185_1799 2161264 - 2161857 + | DoxX family protein TERM 2512 2161906 - 2161924 + F 100 -10.3 -5.65177 | opp_overlap 2161906 AATCAAAGCGTTAAA TCCCACC CATGC GGTGGGA TTTTTTTATGCCTCT TERM 2513 2161924 - 2161906 - f 80 -10.3 -3.65084 | opp_overlap 2161906 AATCAAAGCGTTAAA TCCCACC CATGC GGTGGGA TTTTTTTATGCCTCT TERM 2514 2162440 - 2162461 + G 75 -3.7 -5.04597 | gap 1 CGCCTTAGGCCTTGA GCCACACGAT CAA ATCGTC-GGC TTTTTGTATGTCGGT Shew185_1800 2161994 - 2162542 + | nitroreductase Shew185_1801 2162610 - 2163113 + | GCN5-related N-acetyltransferase TERM 2515 2163189 - 2163209 + F 76 -9.1 -3.61715 | GCAAAATTTACTGTC GAGATATGG CAA TCATATCTC TTATTGACGCCCCTC Shew185_1802 2163326 - 2163925 + | prolyl 4-hydroxylase alpha subunit Shew185_1803 2164384 - 2164989 + | GCN5-related N-acetyltransferase Shew185_1804 2165009 - 2165473 + | GCN5-related N-acetyltransferase Shew185_1805 2165506 - 2165910 + | hypothetical protein TERM 2516 2165999 - 2165984 - f 72 -10.4 -2.62018 | opp_overlap 2165984, overlap 2165983 AACATGTGAAGTAAG GGAGCC TAAG GGCTCC TTTTTGCGCTAAGAA TERM 2517 2165984 - 2165999 + F 91 -10.4 -4.62069 | opp_overlap 2165984 2165983 AACATGTGAAGTAAG GGAGCC TAAG GGCTCC TTTTTGCGCTAAGAA TERM 2518 2166369 - 2166383 + G 89 -5.7 -5.26316 | TTGCGCTGTTTATTT CACTG CCAGT CAGTG TTTTTTGTGGCCTCA Shew185_1806 2166225 - 2166620 + | hypothetical protein Shew185_1807 2167570 - 2166740 - | hypothetical protein TERM 2519 2168184 - 2168196 + G 75 -10.5 -3.27923 | TCCTTGGCAGTTATT CGCCC TGT GGGCG TTAGTGATCTTGCCC Shew185_1808 2167708 - 2168862 + | hypothetical protein TERM 2520 2169065 - 2169099 + G 80 -6.4 -4.68511 | ATTCCTTGGTATATT GCCGCTATGCAGGC CTTCGCC GCTTGGATAGCCGC TTTGTTTCTATTGGG Shew185_1809 2168849 - 2170048 + | hypothetical protein Shew185_1810 2170048 - 2170563 + | hypothetical protein TERM 2521 2170563 - 2170577 + F 79 -9.2 -3.79668 | ACTTGAGCCCTTATA GCCCTG CGT CGGGGC TTTCATCCATTGGCT Shew185_1811 2170878 - 2173712 + | PKD domain-containing protein TERM 2522 2173751 - 2173766 + F 100 -11.8 -5.26119 | opp_overlap 2173751 TTTAAGTGACTCAAA GCCCGC AGCC GCGGGC TTTTCTTTTTGCCCA TERM 2523 2173766 - 2173751 - f 89 -11.8 -3.68619 | opp_overlap 2173751 TTTAAGTGACTCAAA GCCCGC AGCC GCGGGC TTTTCTTTTTGCCCA TERM 2524 2174938 - 2174952 + G 77 -2.8 -5.19328 | overlap 2174940 GAGCGCGACAACCAG CCCAAT GCC ATTGCG TTTTTATTATCGGAT Shew185_1812 2174242 - 2175192 + | hypothetical protein TERM 2525 2175302 - 2175313 + F 74 -4.4 -4.87665 | TCCACTATTTTTTAA TGAG TAAG CTCA TTTTTATGCCTCAGC Shew185_1813 2176073 - 2177272 + | putative esterase TERM 2526 2177662 - 2177641 - g 75 -3.7 -5.15167 | gap 1, overlap 2177642 TATCAGCAAGAAAAA CTCC-CCAAC TAT GCTGATGGAG ATTTATAAGCATTGC Shew185_1814 2177318 - 2177746 + | hypothetical protein TERM 2527 2177857 - 2177799 - f 76 -9.2 -3.67843 | gap 4, opp_overlap 2177844 2177846, overlap 2177800 TAAAATTTTTAATAA GGCCAGCCAGAGGACCAAAAAAACTGCAGC TTC GCT-CTGTTTTTTCGGCCC-CTG-CTGGC- GGCGTTATGCGTAAA TERM 2528 2177857 - 2177800 - f 95 -15.2 -2.79983 | gap 3, opp_overlap 2177844 2177846, overlap 2177799 AAAATTTTTAATAAG GCCAGCCAGAGGACCAAAAAAACTGCAGC TTC GCT-CTGTTTTTTCGGCCC-CTG-CTGGC GGCGTTATGCGTAAA Shew185_1815 2177898 - 2178329 + | hypothetical protein TERM 2529 2178691 - 2178668 - T 100 -11.2 -5.64304 | opp_overlap 2178665 2178668 CAAGACAATAAAAAA GTGCTTTATT TTTC AATAAAGCAC TCATTTCTAAGCGAC TERM 2530 2178668 - 2178691 + T 81 -11.2 -3.00946 | opp_overlap 2178668, overlap 2178665 CAAGACAATAAAAAA GTGCTTTATT TTTC AATAAAGCAC TCATTTCTAAGCGAC Shew185_1816 2179650 - 2178754 - | hypothetical protein TERM 2531 2179460 - 2179484 + g 75 -5.8 -4.6265 | gap 1, overlap 2179477 2179480 ACACCAATGACATCG TGCG-CTGCTT GTTC AAGCAGGTGCA TTTTGTACTTGTTGT Shew185_1817 2180420 - 2179662 - | hypothetical protein TERM 2532 2180119 - 2180139 + g 71 -4.7 -4.64346 | opp_overlap 2180119 AAAAAATCAAAGGTA TGCTGAATA AGT TCTTCGGCA TTGTTTTTGATTTTT Shew185_1818 2180947 - 2180420 - | hypothetical protein Shew185_1819 2181255 - 2180971 - | heat shock protein DnaJ domain-containing protein Shew185_1820 2183212 - 2181650 - | Ppx/GppA phosphatase TERM 2533 2182229 - 2182246 + g 76 -11.3 -3.16564 | opp_overlap 2182221, overlap 2182212 GCGAATATCCTGATA CTGGCCA ATTT TGGCCAG TTCATAGAGTACGCC TERM 2534 2183247 - 2183262 + r 80 -10.4 -3.64103 | opp_overlap 2183247 TCAAAGCGATATAAA GCCAGC GTTA GCTGGC TTTGGCCTGTAACTC TERM 2535 2183262 - 2183247 - R 86 -10.4 -4.11295 | opp_overlap 2183247 TCAAAGCGATATAAA GCCAGC GTTA GCTGGC TTTGGCCTGTAACTC Shew185_1821 2185425 - 2183254 - | polyphosphate kinase TERM 2536 2183425 - 2183450 + g 71 -3.9 -4.71584 | ACGCACTTTTCGTTT GTTACCCCGGT TTCG ATAGGGGTTAC TTTGTTCTTTGTTTA TERM 2537 2184176 - 2184222 + g 70 -9.6 -3.17194 | gap 1, opp_overlap 2184177, overlap 2184161 2184217 CCCGCTTCGGCCAAG ATGCGGGTCC-ATTCGATG TTGGATTGCT CATCGAATCGGGCCCGCAG TTCAATTACAGCGGT TERM 2538 2184221 - 2184177 - G 74 -10.9 -3.01712 | gap 1, opp_overlap 2184161 2184176 2184217 CCGCTTCGGCCAAGA TGCGGGTCC-ATTCGATG TTGGATTGCT CATCGAATCGGGCCCGCA GTTCAATTACAGCGG TERM 2539 2186018 - 2185995 - g 81 -8 -4.63527 | opp_overlap 2186011, overlap 2186012 CGATTACGCCAAAAA GCGCGCCGCA CAAT TGAGCCGCGC CCGCATGGTGCGCCA TERM 2540 2186534 - 2186522 - g 90 -9.1 -4.56597 | GCTCTGTGGTAAAAA TGGGC CCA GCCCA TAAACAAAAAGCGGA Shew185_1822 2185801 - 2187270 + | putative chaperone Shew185_1823 2187308 - 2187655 + | hypothetical protein Shew185_1824 2187704 - 2188192 + | CreA family protein TERM 2541 2188343 - 2188310 - T 80 -11.1 -3.31501 | opp_overlap 2188315 2188317, overlap 2188301 2188315 2188317 AGTAAGTGTTGATAA CAAAAGTGGCGGAAT GTTT ATTCCGCCCCTTTTT GTTTTTATAGGCTGC TERM 2542 2188315 - 2188338 + T 100 -11 -5.69262 | opp_overlap 2188315 2188310 2188317, overlap 2188317 GTGTTGATAACAAAA GTGGCGGAAT GTTT ATTCCGCCCC TTTTTGTTTTTATAG TERM 2543 2188338 - 2188315 - T 93 -11 -4.77165 | opp_overlap 2188315 2188317, overlap 2188310 2188317 GTGTTGATAACAAAA GTGGCGGAAT GTTT ATTCCGCCCC TTTTTGTTTTTATAG TERM 2544 2188336 - 2188317 - T 81 -12.2 -2.67008 | opp_overlap 2188315 2188317, overlap 2188315 2188310 GTTGATAACAAAAGT GGCGGAAT GTTT ATTCCGCC CCTTTTTGTTTTTAT TERM 2545 2188317 - 2188336 + T 82 -12.2 -2.9703 | opp_overlap 2188317 2188315 2188310, overlap 2188315 GTTGATAACAAAAGT GGCGGAAT GTTT ATTCCGCC CCTTTTTGTTTTTAT Shew185_1825 2189639 - 2188440 - | cystathionine beta-lyase Shew185_1826 2191987 - 2189819 - | integral membrane sensor signal transduction histidine kinase TERM 2546 2191124 - 2191146 + g 71 -10.6 -2.91981 | opp_overlap 2191123 2191124, overlap 2191123 2191118 ATCGACTACCCAAAT GCGTGAGCTA TAG TGGCTCATGC CTTTGATAATGTTTT TERM 2547 2191237 - 2191247 + g 70 -2.4 -4.84274 | TGCCGACAACGGCTG CCAC ATC GCGG TTTTTGCTGTCGTTA Shew185_1827 2192754 - 2192062 - | two component transcriptional regulator TERM 2548 2193245 - 2193261 + G 74 -9.4 -3.63569 | TGGCGCGTTAGTCGG TGGCCC AGTGG GGGCCA TTATTGGCGCGTTCA Shew185_1828 2193012 - 2193842 + | OmpA/MotB domain-containing protein Shew185_1829 2193948 - 2196266 + | vault protein inter-alpha-trypsin subunit Shew185_1830 2196299 - 2196997 + | sortase family protein TERM 2549 2197137 - 2197189 + T 73 -8.6 -3.68827 | gap 1, opp_overlap 2197145 2197146, overlap 2197147 CGCCAAATGTCTTCA CTAAATAACTTTAGCCTGAAGCCGA ATCA TCGGCTTCAGGCTAAT-TCATTGCG TTTCGGTCATGACTC TERM 2550 2197182 - 2197145 - T 100 -15.7 -4.00042 | opp_overlap 2197137 2197147, overlap 2197146 GTCTTCACTAAATAA CTTTAGCCTGAAGCCGA ATCA TCGGCTTCAGGCTAATT CATTGCGTTTCGGTC TERM 2551 2197181 - 2197146 - T 100 -19.2 -2.99704 | opp_overlap 2197137 2197147, overlap 2197145 TCTTCACTAAATAAC TTTAGCCTGAAGCCGA ATCA TCGGCTTCAGGCTAAT TCATTGCGTTTCGGT TERM 2552 2197147 - 2197180 + T 100 -22.7 -3.43217 | opp_overlap 2197146 2197145, overlap 2197137 CTTCACTAAATAACT TTAGCCTGAAGCCGA ATCA TCGGCTTCAGGCTAA TTCATTGCGTTTCGG Shew185_1831 2198258 - 2197233 - | diguanylate cyclase Shew185_1832 2198469 - 2200091 + | peptidase M28 TERM 2553 2200110 - 2200133 + T 91 -11 -4.58663 | opp_overlap 2200110 TAATGAGTTGAATCA TGAGGGCGCC AGTA GGTGCCCTTA TTTTTGGACACTGAT Shew185_1833 2201090 - 2200227 - | hypothetical protein TERM 2554 2201466 - 2201440 - R 89 -11.7 -3.75598 | opp_overlap 2201434 2201440 TAATCAATTTAAGAA TATCTAGCGGC GTGAT ACCGCTAGATA TTGATATTATATCGC TERM 2555 2201440 - 2201466 + r 82 -11 -3.44443 | opp_overlap 2201440, overlap 2201434 TAATCAATTTAAGAA TATCTAGCGG CGTGATA CCGCTAGATA TTGATATTATATCGC TERM 2556 2201510 - 2201520 + r 71 -6.8 -4.00066 | opp_overlap 2201510 AGGCTCGATAACGGA CGTC ACA GACG TTTCTACATTGTCAG Shew185_1834 2202475 - 2201489 - | alpha-L-glutamate ligase TERM 2557 2201667 - 2201679 + g 74 -6.3 -4.4648 | AATCCTGGGGATGAG TTTGC TTC GCAAA TTTTGTAATGGCCGT TERM 2558 2202291 - 2202279 - G 73 -3.3 -4.89477 | overlap 2202280 2202281 CGCGGAATAATAAAA TCGGG CAG CTCGA CGGCTTGCCCATTCA Shew185_1835 2202945 - 2202496 - | hypothetical protein Shew185_1836 2203054 - 2203923 + | LysR family transcriptional regulator Shew185_1837 2204305 - 2203934 - | diacylglycerol kinase TERM 2559 2204813 - 2204798 - g 71 -4 -4.68593 | gap 1, opp_overlap 2204798 TTGATTAGCGAAAAA CTCG-AC GGG GTGCGAG GTTACTGGAATGGTC Shew185_1838 2204585 - 2205532 + | DNA ligase TERM 2560 2205527 - 2205567 + T 71 -7.6 -3.8646 | gap 1, opp_overlap 2205529 2205532, overlap 2205529 TCATCGCAAGAAGGA AACTAGCGG-GCAGTTCTG CCCG CAATACTGCTCCGCTAGTA TTTAAATTATTACTC TERM 2561 2205565 - 2205529 - T 93 -12.4 -4.0802 | gap 1, opp_overlap 2205527 2205529, overlap 2205532 ATCGCAAGAAGGAAA CTAGCGG-GCAGTTCTG CCCG CAATACTGCTCCGCTAG TATTTAAATTATTAC TERM 2562 2205529 - 2205565 + T 79 -10.2 -3.50953 | gap 1, opp_overlap 2205529 2205532, overlap 2205527 ATCGCAAGAAGGAAA CTAGCGG-GCAGTTCTG CCCG CAATACTGCTCCGCTAG TATTTAAATTATTAC TERM 2563 2205549 - 2205532 - T 84 -12.7 -3.07051 | opp_overlap 2205529 2205527, overlap 2205529 GCAAGAAGGAAACTA GCGGGCA GTTC TGCCCGC AATACTGCTCCGCTA Shew185_1839 2206647 - 2205577 - | hypothetical protein TERM 2564 2206775 - 2206765 - H 70 -5.4 -4.40358 | opp_overlap 2206765 ACCTAGCCGATAAAA GAAC CAT GTTC TGGTCTAATTCCATC Shew185_1840 2206838 - 2207997 + | transposase IS3/IS911 family protein Shew185_1841 2209753 - 2208569 - | phage integrase family protein Shew185_1842 2209973 - 2209743 - | excisionase, putative Shew185_1843 2210326 - 2209970 - | hypothetical protein Shew185_1844 2210819 - 2210505 - | hypothetical protein Shew185_1845 2211136 - 2210816 - | GP46 Shew185_1846 2211363 - 2211133 - | hypothetical protein Shew185_1847 2211638 - 2211360 - | hypothetical protein Shew185_1848 2211917 - 2211639 - | hypothetical protein Shew185_1849 2212978 - 2211914 - | hypothetical protein Shew185_1850 2213604 - 2212975 - | hypothetical protein Shew185_1851 2213982 - 2213635 - | hypothetical protein TERM 2565 2213902 - 2213926 + g 81 -7.9 -4.57569 | gap 1 TTGACGGCGGTTAGG GTGC-GCACC GACTGA GGTGCTGCAC TTTTTGGCCGCCTGC Shew185_1852 2214471 - 2214109 - | hypothetical protein Shew185_1853 2215792 - 2215127 - | putative prophage repressor TERM 2566 2216039 - 2216019 - g 71 -3.9 -4.81359 | AATGGAAATAGAAAA CCTAGCTAT GAC ATGGCTTGG AAAGTAGTAAACGCT Shew185_1854 2215905 - 2216195 + | XRE family transcriptional regulator TERM 2567 2216485 - 2216499 + G 70 -7.8 -3.92324 | opp_overlap 2216481 GAGGGCCAACATCCA CAGGCG GAT CGCTTG TTTCATGTTGAACAA Shew185_1855 2216227 - 2216850 + | hypothetical protein Shew185_1856 2216856 - 2217182 + | hypothetical protein Shew185_1857 2217346 - 2218083 + | hypothetical protein TERM 2568 2218668 - 2218653 - g 74 -9 -3.73224 | TGAGGGTGCAGCAAA TGCACC CATG GGTGCA GGAGATTCACCCTCT Shew185_1858 2218228 - 2219085 + | putative replication protein Shew185_1859 2219082 - 2219768 + | replication P family protein Shew185_1860 2219758 - 2219982 + | hypothetical protein Shew185_1861 2219983 - 2221251 + | phage integrase family protein Shew185_1862 2221300 - 2221515 + | XRE family transcriptional regulator Shew185_1863 2221505 - 2221864 + | hypothetical protein TERM 2569 2221887 - 2221872 - f 72 -10.4 -2.6953 | overlap 2221864 2221861 2221871 TGAATTAGAAGGAAC GCCCTC TTAC GAGGGC TGGCGGGTTAGCCGG TERM 2570 2222606 - 2222629 + G 75 -3.2 -5.07652 | opp_overlap 2222606, overlap 2222601 ACAACTTGATGGAAA CTATTACAAT ATTC GTAGTAATAG TTTTCTTTTAGAACC Shew185_1864 2222502 - 2223041 + | hypothetical protein Shew185_1865 2223909 - 2223127 - | hypothetical protein Shew185_1866 2225264 - 2223924 - | hypothetical protein Shew185_1867 2227347 - 2225266 - | type II secretion system protein E TERM 2571 2228037 - 2228019 - H 80 -6 -4.67234 | opp_overlap 2228022, overlap 2228022 ATTCAACCGGAAAAA TATGTGAC ACT GTCACTTA TTGATTATAATAATT TERM 2572 2228022 - 2228034 + H 73 -7.7 -3.86981 | opp_overlap 2228019 2228022 CAACCGGAAAAATAT GTGAC ACT GTCAC TTATTGATTATAATA TERM 2573 2228182 - 2228172 - H 78 -4 -5.28176 | GTGATTTATAAAAAA TATG ATT CATA ATGATTAAACACTGA Shew185_1868 2228305 - 2228724 + | hypothetical protein TERM 2574 2228761 - 2228744 - f 71 -6.3 -4.1774 | AATAATGATAAATAA CCTTCGT GATT ACAAAGG CATTCTGTTGTGCGT Shew185_1869 2229030 - 2230739 + | hypothetical protein Shew185_1870 2230736 - 2232190 + | hypothetical protein Shew185_1871 2233828 - 2232566 - | HipA domain-containing protein TERM 2575 2232766 - 2232781 + g 81 -3.2 -5.48514 | GGAAGGTAGTGATAT CAATGG CGTA CCATAG TTTTTGTTTATTCAT Shew185_1872 2234172 - 2233825 - | XRE family transcriptional regulator TERM 2576 2234200 - 2234252 + H 100 -24.9 -4.0641 | opp_overlap 2234204, overlap 2234204 GTTATCTTTTACTCA TAAACATCATATTAGTTGTTATTAG CCA TTAATAACAACTAATATGATGTTTA TTTGTGTGAATACAA TERM 2577 2234248 - 2234204 - H 100 -20.6 -3.91897 | opp_overlap 2234200 2234204 TCTTTTACTCATAAA CATCATATTAGTTGTTATTA GCCAT TAATAACAACTAATATGATG TTTATTTGTGTGAAT TERM 2578 2234204 - 2234248 + H 100 -21.3 -4.63044 | opp_overlap 2234204, overlap 2234200 TCTTTTACTCATAAA CATCATATTAGTTGTTATTAG CCA TTAATAACAACTAATATGATG TTTATTTGTGTGAAT TERM 2579 2234634 - 2234609 - H 100 -7.6 -5.86332 | CTAAGGCAAAAAAAA GCCCCGTT GAAAGGAAGA AACGGGGC GAAATGGGTCTGTTT TERM 2580 2235966 - 2235939 - g 71 -2.8 -4.96501 | TTTCAGAAAAAGAAA CTCGTACACT ATTTTAGA AGTATACAAG CACTGGCATACTGGT Shew185_1873 2235115 - 2235987 + | hypothetical protein Shew185_1874 2235997 - 2236257 + | hypothetical protein TERM 2581 2236312 - 2236327 + G 80 -4.6 -5.04601 | CTTGAATGGCATTCT GGGGGC CATT GCTCTC TTTTTGATTTCTAAA Shew185_1875 2236241 - 2236696 + | hypothetical protein TERM 2582 2237037 - 2237015 - f 91 -10.6 -4.56597 | overlap 2237000 2237016 GCTTTGGGGCAAAAA CGCGTTAGCC CAA AGCTAACGCA AAAAGACGGTGTGTC TERM 2583 2237036 - 2237016 - f 86 -11.9 -3.33744 | overlap 2237000 2237015 CTTTGGGGCAAAAAC GCGTTAGCC CAA AGCTAACGC AAAAAGACGGTGTGT TERM 2584 2237085 - 2237059 - f 83 -12.5 -2.78384 | opp_overlap 2237052 2237063, overlap 2237063 CGGTGTGTCAGGACA TGAATCAGACT AGGCA AGTCTGATTCA CTGTAACGGTTTATG TERM 2585 2237879 - 2237937 + F 100 -12.6 -4.69326 | gap 2, opp_overlap 2237867 2237878 2237879, overlap 2237885 CCATGCAGCAGTAAG GCTAC--AGGCGAGTCGTTGCATCAACC CTACA GGAGGATGCAATGACTCGCCTTTGTTGC TTTTGTGTTAACTAT TERM 2586 2237937 - 2237879 - f 76 -11.1 -2.53164 | gap 2, opp_overlap 2237879 2237885, overlap 2237867 2237878 CCATGCAGCAGTAAG GCTACA--GGCGAGTCGTTGCATCAACCC TAC AGGAGGATGCAATGACTCGCCTTTGTTGC TTTTGTGTTAACTAT TERM 2587 2237885 - 2237929 + F 100 -19.4 -4.48176 | opp_overlap 2237878 2237879, overlap 2237879 AGCAGTAAGGCTACA GGCGAGTCGTTGCATCAACC CTACA GGAGGATGCAATGACTCGCC TTTGTTGCTTTTGTG Shew185_1876 2239168 - 2239443 + | hypothetical protein Shew185_1877 2239642 - 2241852 + | amidohydrolase 3 TERM 2588 2241871 - 2241891 + T 77 -6.1 -4.49337 | TAAACCTTAAAAGCT GGAGGGG ATAAGTG CCCCTTC TTTTATCAATTATGG TERM 2589 2242015 - 2242037 + T 79 -11.3 -2.71924 | overlap 2242014 AACACGCTGGCATTT TGCGTGAGC TTCGT GCTCACGCG CTTTGGACCAAACTC Shew185_1878 2243412 - 2242672 - | amino acid ABC transporter periplasmic protein Shew185_1879 2244462 - 2245250 + | hypothetical protein Shew185_1880 2245243 - 2246178 + | hypothetical protein Shew185_1881 2246629 - 2247072 + | protein tyrosine phosphatase TERM 2590 2247121 - 2247153 + T 74 -6.3 -4.37711 | opp_overlap 2247126, overlap 2247126 2247149 CCGTTTATTAAAATA AAAAAGCCAGCATAT TCA ATATGCTGGCTTAAA TTTTAAATTTGATGA TERM 2591 2247148 - 2247126 - T 100 -15 -5.83211 | opp_overlap 2247121 2247126 TATTAAAATAAAAAA GCCAGCATAT TCA ATATGCTGGC TTAAATTTTAAATTT TERM 2592 2247126 - 2247148 + T 100 -15 -3.39955 | opp_overlap 2247126, overlap 2247121 TATTAAAATAAAAAA GCCAGCATAT TCA ATATGCTGGC TTAAATTTTAAATTT Shew185_1882 2248219 - 2247278 - | ribosomal biogenesis GTPase TERM 2593 2248291 - 2248304 + r 83 -9.5 -3.80114 | opp_overlap 2248291, overlap 2248301 AATGTCATAAAAAAA GCGCC CTAA GGCGC TTTAATCGCTTAATC TERM 2594 2248304 - 2248291 - R 100 -9.5 -5.63504 | opp_overlap 2248291 2248301 AATGTCATAAAAAAA GCGCC CTAA GGCGC TTTAATCGCTTAATC Shew185_1883 2249209 - 2248370 - | 2OG-Fe(II) oxygenase TERM 2595 2250163 - 2250178 + G 77 -4 -5.03715 | gap 1 GGAAATTGATTTTAC GACGCTG TTG CAG-GTC TTTTTTGAGAGTCAT Shew185_1884 2249588 - 2250493 + | bifunctional methionine sulfoxide reductase B/A protein TERM 2596 2250551 - 2250517 - T 83 -11 -3.62096 | gap 1, opp_overlap 2250517 2250525, overlap 2250519 2250525 GCGCAGGATGTTAAA TACAAAAACGCCACC GATAAA GGTGGCGTTTTT-TA TAGATTTTTTAATGT TERM 2597 2250517 - 2250551 + T 78 -11 -2.949 | gap 1, opp_overlap 2250517 2250519 2250525, overlap 2250525 GCGCAGGATGTTAAA TACAAAAACGCCACC GATAAA GGTGGCGTTTTT-TA TAGATTTTTTAATGT TERM 2598 2250550 - 2250519 - T 86 -11.7 -3.39018 | opp_overlap 2250517 2250525, overlap 2250517 2250525 GCAGGATGTTAAATA CAAAAACGCCACC GATAAA GGTGGCGTTTTTT ATAGATTTTTTAATG TERM 2599 2250525 - 2250544 + T 100 -10.7 -5.35222 | opp_overlap 2250525 2250519 2250517, overlap 2250517 TGTTAAATACAAAAA CGCCACC GATAAA GGTGGCG TTTTTTATAGATTTT TERM 2600 2250544 - 2250525 - T 100 -10.7 -5.19879 | opp_overlap 2250517 2250525, overlap 2250519 2250517 TGTTAAATACAAAAA CGCCACC GATAAA GGTGGCG TTTTTTATAGATTTT Shew185_1885 2251574 - 2250591 - | delta-aminolevulinic acid dehydratase Shew185_1886 2251926 - 2252639 + | peptidase M22 glycoprotease TERM 2601 2252648 - 2252680 + F 73 -9.9 -3.21595 | TGAATAAGCTGTTCT TTGCCTGAGTATCTG CGA TAGAATCTCAGGCAA TTAATGCTAAGCATT Shew185_1887 2252746 - 2253060 + | hypothetical protein TERM 2602 2253138 - 2253151 + G 74 -6.7 -4.31433 | overlap 2253125 CTGCCAGCGGTGTAC CAAGC CGTG GCTTG TTTATTATCGAGCTG Shew185_1888 2253053 - 2253781 + | hypothetical protein TERM 2603 2254648 - 2254622 - g 75 -3.6 -5.08824 | overlap 2254624 GCTCTAGCCAAAAAA GCCGGTTTCACC TTA GTTGAAAGCGCC GAAATCAATGCGAAC Shew185_1889 2253992 - 2254804 + | hypothetical protein Shew185_1890 2254826 - 2255692 + | alpha/beta hydrolase fold Shew185_1891 2255894 - 2257567 + | long-chain-fatty-acid--CoA ligase TERM 2604 2257575 - 2257590 + F 91 -8.2 -5.35224 | opp_overlap 2257575 GCGCGTAAGATTGAA GCCGGC ATTT GCTGGC TTTTGTTTTTATGGA Shew185_1892 2257638 - 2258747 + | ribonuclease D TERM 2605 2258772 - 2258802 + T 72 -9.1 -3.38046 | opp_overlap 2258771, overlap 2258770 2258773 TCTAGTATTTAAATC TTGCGCGTGAAGT CTTGT ACTTTATGCGCAG TATTTAAGCTGGAAA TERM 2606 2258773 - 2258801 + T 72 -10.4 -2.62613 | opp_overlap 2258771, overlap 2258772 2258770 CTAGTATTTAAATCT TGCGCGTGAAGT CTTGT ACTTTATGCGCA GTATTTAAGCTGGAA TERM 2607 2258832 - 2258857 + T 100 -16.3 -4.68593 | opp_overlap 2258832 AACAGCCAACAAAAA GCGTCATCTTC CACA GAAGATGACGC TTTTTGCGTAATCGA TERM 2608 2258857 - 2258832 - T 100 -16.3 -5.12971 | opp_overlap 2258832 AACAGCCAACAAAAA GCGTCATCTTC CACA GAAGATGACGC TTTTTGCGTAATCGA Shew185_1893 2259131 - 2258874 - | cell division topological specificity factor MinE Shew185_1894 2259943 - 2259134 - | septum site-determining protein MinD Shew185_1895 2260636 - 2259971 - | septum site-determining protein MinC Shew185_1896 2260760 - 2261038 + | hypothetical protein Shew185_1897 2261069 - 2262181 + | lytic murein transglycosylase TERM 2609 2262209 - 2262189 - f 77 -8.2 -4.18094 | opp_overlap 2262191, overlap 2262191 TAAACTAGTGTAAAA TAGCCCGC ATTAA GCGGGCTT TTTATTGAGAAGATA TERM 2610 2262207 - 2262191 - f 83 -10.8 -3.68036 | opp_overlap 2262191, overlap 2262189 AACTAGTGTAAAATA GCCCGC ATTAA GCGGGC TTTTTATTGAGAAGA TERM 2611 2262191 - 2262207 + F 93 -10.8 -5.06414 | opp_overlap 2262189 2262191 AACTAGTGTAAAATA GCCCGC ATTAA GCGGGC TTTTTATTGAGAAGA Shew185_1898 2262234 - 2262674 + | hypothetical protein TERM 2612 2262794 - 2262826 + T 85 -9.1 -4.28656 | opp_overlap 2262795 2262798, overlap 2262798 2262801 CGTCAGAATGAAAAA ACAACAAGGGAGCGA TTA TCGCTCCCTTGTGCA TTTTGGGTGTTAAGT TERM 2613 2262824 - 2262795 - T 100 -15.9 -5.32944 | gap 1, opp_overlap 2262794 2262798 2262801, overlap 2262798 GTCAGAATGAAAAAA CAACAAGGGAGCGA TTA TCGCTCCCTTGT-G CATTTTGGGTGTTAA TERM 2614 2262798 - 2262822 + T 100 -18.7 -2.77519 | opp_overlap 2262798 2262795, overlap 2262794 2262801 AGAATGAAAAAACAA CAAGGGAGCGA TTA TCGCTCCCTTG TGCATTTTGGGTGTT TERM 2615 2262822 - 2262798 - T 100 -18.7 -4.73828 | opp_overlap 2262794 2262798 2262801, overlap 2262795 AGAATGAAAAAACAA CAAGGGAGCGA TTA TCGCTCCCTTG TGCATTTTGGGTGTT TERM 2616 2262801 - 2262819 + T 100 -14.6 -3.52515 | opp_overlap 2262798 2262795, overlap 2262798 2262794 ATGAAAAAACAACAA GGGAGCGA TTA TCGCTCCC TTGTGCATTTTGGGT Shew185_1899 2264391 - 2262871 - | methyl-accepting chemotaxis sensory transducer TERM 2617 2265031 - 2265019 - g 71 -4.8 -4.64334 | overlap 2265021 AAGCCCTGAAGAAAA GCCA GCCTT TGGC CAAGCGGTCAATGAT TERM 2618 2265781 - 2265802 + G 71 -4.5 -4.56597 | gap 1, overlap 2265776 2265784 2265798 AACTATGTTGCGTTA CG-GCGTAAA CGA TTTACGTGCG TTTTTCGAAAACGAC Shew185_1900 2264861 - 2265844 + | phenylalanyl-tRNA synthetase subunit alpha TERM 2619 2267884 - 2267900 + G 75 -5.1 -4.74504 | opp_overlap 2267887, overlap 2267887 GAAGCCTTTTGGACT CAATGGT AAA ACCATCG TTTTTGAGTTGGAAT Shew185_1901 2265860 - 2268247 + | phenylalanyl-tRNA synthetase subunit beta Shew185_1902 2268251 - 2268547 + | integration host factor, alpha subunit TERM 2620 2268558 - 2268599 + F 100 -11 -5.626 | opp_overlap 2268569, overlap 2268562 2268564 AGTAATTTCGTTTGT TTGATGGGAAAGCCACTC CTTAGA GAGTGGCTTTCCTGTTTA TTTTTTTGTGCAATA TERM 2621 2268562 - 2268595 + F 100 -14 -5.27709 | opp_overlap 2268569, overlap 2268558 2268564 ATTTCGTTTGTTTGA TGGGAAAGCCACTC CTTAGA GAGTGGCTTTCCTG TTTATTTTTTTGTGC TERM 2622 2268564 - 2268593 + F 100 -16.6 -4.23106 | opp_overlap 2268569, overlap 2268562 2268558 TTCGTTTGTTTGATG GGAAAGCCACTC CTTAGA GAGTGGCTTTCC TGTTTATTTTTTTGT TERM 2623 2268588 - 2268569 - f 79 -10 -3.59979 | opp_overlap 2268564 2268562 2268558 TTGTTTGATGGGAAA GCCACTCC TTAG AGAGTGGC TTTCCTGTTTATTTT TERM 2624 2268959 - 2268974 + G 74 -9 -3.68529 | AAGGCGAATTGCTGG TGCGCT CAAA AGCGCA TTTGCGTCGTCGAGT Shew185_1903 2268652 - 2269593 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2625 2269623 - 2269651 + T 100 -18.3 -5.45802 | opp_overlap 2269623, overlap 2269615 TAATATGGCTAAAAA TGGCTTTGAGCGC TCG GTGCTCAAAGCCA TTTTTGTTTTGAGGG TERM 2626 2269651 - 2269623 - T 100 -16.1 -4.62302 | opp_overlap 2269615 2269623 TAATATGGCTAAAAA TGGCTTTGAGCGC TCG GTGCTCAAAGCCA TTTTTGTTTTGAGGG Shew185_1904 2270104 - 2269751 - | hydrogenase nickel insertion protein HypA Shew185_1905 2271120 - 2270104 - | hydrogenase expression/formation protein HypE TERM 2627 2270714 - 2270696 - G 71 -4.4 -4.70887 | GTATTAATAAATAAA CCATCGGC ACA GCCCTTGG GCACAACTTTAGTGT TERM 2628 2270726 - 2270753 + g 72 -6.2 -4.4572 | gap 1 TTGGGCACAACTTTA GTGTCGCCGCAGA CAA TCCGC-GCGCCAC TTTGTTTGAGCTCTT TERM 2629 2271051 - 2271037 - G 77 -4.2 -5.03747 | opp_overlap 2271037 2271039, overlap 2271039 AAATTCGGCAAAAAA CAGATC ACG GATCAG TTTATTCATTTCTTT Shew185_1906 2272252 - 2271113 - | hydrogenase expression/formation protein HypD Shew185_1907 2272561 - 2272316 - | hydrogenase assembly chaperone hypC/hupF Shew185_1908 2273394 - 2272561 - | hydrogenase accessory protein HypB TERM 2630 2272943 - 2272955 + g 76 -9.1 -3.87149 | overlap 2272941 AAGGCGTCAAGGTGA CAGGC GCT GCCTG TTTGAATTTGATAGG TERM 2631 2273572 - 2273549 - H 87 -6 -5.252 | gap 1, opp_overlap 2273549 2273567 TATGGGGATAAAAAA TGACCGCGCGA TAT TCGT-CGGTCA TTTAGTGTGATCGTC TERM 2632 2273549 - 2273572 + H 73 -8.2 -3.86916 | gap 1, opp_overlap 2273549, overlap 2273567 TATGGGGATAAAAAA TGACCGCGCGA TAT TCGT-CGGTCA TTTAGTGTGATCGTC Shew185_1909 2274183 - 2275148 + | hypothetical protein TERM 2633 2275195 - 2275235 + T 100 -14.9 -3.94409 | opp_overlap 2275201 2275206, overlap 2275206 GCCCGCAATTGTGTT GAAGAATAAAACGAGCCTC AAT GAGGCTCGTTTTTATTTTC TTTATCACTGCTATA TERM 2634 2275229 - 2275201 - T 100 -14.7 -3.61894 | opp_overlap 2275195 2275206, overlap 2275206 AATTGTGTTGAAGAA TAAAACGAGCCTC AAT GAGGCTCGTTTTT ATTTTCTTTATCACT TERM 2635 2275224 - 2275206 - T 100 -14.6 -4.89477 | opp_overlap 2275195 2275206, overlap 2275201 TGTTGAAGAATAAAA CGAGCCTC AAT GAGGCTCG TTTTTATTTTCTTTA TERM 2636 2275206 - 2275224 + T 100 -14.6 -5.67711 | opp_overlap 2275206 2275201, overlap 2275195 TGTTGAAGAATAAAA CGAGCCTC AAT GAGGCTCG TTTTTATTTTCTTTA Shew185_1910 2277786 - 2275270 - | (NiFe) hydrogenase maturation protein HypF TERM 2637 2277615 - 2277598 - G 71 -6.9 -4.18019 | ATAACGATAGACAAA GGGGCGA AATC CCACCCC TTGCACTATGCCAGT Shew185_1911 2279689 - 2277779 - | hypothetical protein Shew185_1912 2280250 - 2279693 - | hydrogenase expression/formation protein TERM 2638 2280216 - 2280189 - G 100 -16.4 -4.49939 | ATATAATTGACAAAA TGCACGCCGATG CCTT CATCGGCGTACA GGACATTGCCAATAC Shew185_1913 2280932 - 2280258 - | Ni/Fe-hydrogenase, b-type cytochrome subunit Shew185_1914 2282655 - 2280952 - | nickel-dependent hydrogenase large subunit Shew185_1915 2283795 - 2282659 - | hydrogenase (NiFe) small subunit HydA Shew185_1916 2284181 - 2284648 + | redoxin domain-containing protein Shew185_1917 2284652 - 2284870 + | putative lipoprotein Shew185_1918 2284995 - 2286314 + | hypothetical protein TERM 2639 2286383 - 2286355 - f 79 -10.3 -3.58037 | opp_overlap 2286354 2286353 2286357, overlap 2286356 TAGCAAGGCGTTAAA CTGTATGGGTAGC TTA GCTACCCATACTC AATTTACCCCTGAGC TERM 2640 2286382 - 2286356 - f 91 -13.8 -2.74501 | opp_overlap 2286354 2286353 2286357, overlap 2286355 AGCAAGGCGTTAAAC TGTATGGGTAGC TTA GCTACCCATACT CAATTTACCCCTGAG TERM 2641 2286357 - 2286381 + F 100 -17.3 -2.64803 | opp_overlap 2286356 2286355, overlap 2286354 2286353 GCAAGGCGTTAAACT GTATGGGTAGC TTA GCTACCCATAC TCAATTTACCCCTGA TERM 2642 2287133 - 2287149 + G 80 -5 -5.05782 | GCGCATTAGCGACCA GCGGCG ATACA CGGCGC TTTTTTGAAGTAGAT Shew185_1919 2286448 - 2287353 + | ApbE family lipoprotein Shew185_1920 2287388 - 2288047 + | two component transcriptional regulator TERM 2643 2288757 - 2288747 - g 73 -5.4 -4.56597 | TCCGGCCGTTAAAAA CCTT CGA AAGG GAGCTGATTGGGCGG Shew185_1921 2288131 - 2289528 + | integral membrane sensor signal transduction histidine kinase TERM 2644 2289707 - 2289726 + F 91 -9.4 -4.54727 | opp_overlap 2289706 2289705 TCATCCACACTAAGT TGAGACTT TAAA AAGTCTCA TTTTACTTTCAAAAA TERM 2645 2290214 - 2290196 - g 76 -2.4 -5.24129 | overlap 2290200 GCCCGCTACAAAAAA TCAAGTGA GAT TCACTAAA ACAGGCGCTTTCGAT Shew185_1922 2290020 - 2291648 + | glucan biosynthesis protein G TERM 2646 2292214 - 2292235 + G 100 -10.9 -4.88228 | gap 1 TACTGATCCTGATAT CGCCTTGCTC GAA GAGCA-GGCG TTTTTGGTGTTACGT TERM 2647 2292323 - 2292301 - g 77 -6.9 -4.56597 | TCGTCGTCGTAAAAA CGTCGCCCG TAAAG CGGGTAACG TGGCGGATTTCTGCC TERM 2648 2292583 - 2292572 - g 71 -4.4 -4.82901 | TGGTGGGTACAAAAA GAAG GTAA CTTC TGGGGCCATAACGCC Shew185_1923 2291672 - 2293855 + | glucosyltransferase MdoH TERM 2649 2293922 - 2293968 + F 90 -13.3 -2.65766 | opp_overlap 2293929 2293934, overlap 2293934 TGGGTTTGGTTGTAA TGATAATGAAAATGCCACTGA CGACC TCAGTGGCATTTTTCTTTTCA TAATCTACAGTTTGC TERM 2650 2293961 - 2293929 - f 81 -12.2 -2.70298 | opp_overlap 2293922 2293934, overlap 2293934 GGTTGTAATGATAAT GAAAATGCCACTGA CGACC TCAGTGGCATTTTT CTTTTCATAATCTAC TERM 2651 2293956 - 2293934 - f 95 -12.1 -4.52781 | opp_overlap 2293922 2293934, overlap 2293929 TAATGATAATGAAAA TGCCACTGA CGACC TCAGTGGCA TTTTTCTTTTCATAA TERM 2652 2293934 - 2293956 + F 100 -12.1 -5.50723 | opp_overlap 2293934 2293929, overlap 2293922 TAATGATAATGAAAA TGCCACTGA CGACC TCAGTGGCA TTTTTCTTTTCATAA TERM 2653 2294348 - 2294373 + G 70 -9.7 -3.23042 | overlap 2294345 CCGATGCAGCCTTGC CACTTACGGCA TTAG TGCCGCAGGTG TTGCTGCTGGATCTT Shew185_1924 2294086 - 2295651 + | peptidoglycan binding domain-containing protein TERM 2654 2295822 - 2295835 + G 70 -8.1 -3.95324 | TGACTTTGATATGTC CTGCC CGTA GGCAG TTATTGTTAGGCCTG Shew185_1925 2295806 - 2296354 + | hypothetical protein Shew185_1926 2296739 - 2296305 - | hypothetical protein Shew185_1927 2297043 - 2297330 + | ribosomal protein L25 TERM 2655 2297353 - 2297366 + T 100 -9.5 -5.64274 | opp_overlap 2297353 AGCTGAAGCAAAAAA GCGCC TAAG GGCGC TTTTTTTGTGGCTGA TERM 2656 2297366 - 2297353 - T 100 -9.5 -5.27477 | opp_overlap 2297353 AGCTGAAGCAAAAAA GCGCC TAAG GGCGC TTTTTTTGTGGCTGA TERM 2657 2297481 - 2297454 - T 84 -12.8 -2.96042 | opp_overlap 2297453 2297456, overlap 2297456 AATACTTATCATAGA CAGGCAGAGTGT ATCG ACACTCCACCTG AATTTGAGTCTGAGT TERM 2658 2297479 - 2297456 - T 72 -9.6 -3.02947 | opp_overlap 2297453 2297456, overlap 2297454 TACTTATCATAGACA GGCAGAGTGT ATCG ACACTCCACC TGAATTTGAGTCTGA Shew185_1928 2301540 - 2297506 - | hypothetical protein TERM 2659 2299289 - 2299305 + g 76 -2.1 -5.32882 | TTTAGACGTTCGACA TCGAGCC GTA GTCGCGA TTTTTTCTCATCGTA TERM 2660 2301409 - 2301420 + g 71 -4.4 -4.67353 | opp_overlap 2301409 AGTCCAGAGTTTAAA CTGT CGCC ACAG TTTTTGAATGAATGA Shew185_1929 2303390 - 2301537 - | surface antigen (D15) TERM 2661 2302356 - 2302366 + g 70 -2.4 -4.90869 | TTTGTCACGTAGCAA ACCG ACG CGGA TTTTTAATTGATCAT Shew185_1930 2303511 - 2304542 + | peptidase T2 asparaginase 2 TERM 2662 2304648 - 2304673 + F 93 -9.7 -4.73388 | opp_overlap 2304648, overlap 2304671 TATAAACCTTAAAAA GCGAGTGCTGC GAAA GTGGTACTCGC TTTTTGCTAGCGGTT Shew185_1931 2304896 - 2306185 + | membrane protein Shew185_1932 2306359 - 2306775 + | signal transduction protein TERM 2663 2309389 - 2309372 - g 71 -8.4 -3.74693 | opp_overlap 2309365 CTCGATTTCAGCAAA GCGCTG TTAATG CAGCGC AATGCCGACCATATC Shew185_1933 2306891 - 2310772 + | ATP-dependent helicase HrpA TERM 2664 2310883 - 2310908 + F 100 -9.8 -5.96894 | opp_overlap 2310883 AACCTTCGGATAAAA CCGAGTAAAG CTAACC CTTTGCTCGG TTTTTTTATTTCCCT TERM 2665 2310908 - 2310883 - f 78 -7.6 -4.37658 | opp_overlap 2310883 AACCTTCGGATAAAA CCGAGTAAAG CTAACC CTTTGCTCGG TTTTTTTATTTCCCT TERM 2666 2311537 - 2311499 - f 81 -6.7 -4.6645 | gap 2 TAGATATACATAAAA CCTGCCGCG-GACGC-TTG TCC CAACGCGCAACGTGGCAGG AACACACCTCTTGGA Shew185_1934 2311559 - 2311717 + | periplasmic nitrate reductase NapE Shew185_1935 2311760 - 2312017 + | NapD family protein Shew185_1936 2312020 - 2314509 + | nitrate reductase Shew185_1937 2314520 - 2315005 + | nitrate reductase cytochrome c-type subunit (NapB) Shew185_1938 2315014 - 2315601 + | NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome TERM 2667 2315743 - 2315720 - f 100 -15.4 -3.65529 | opp_overlap 2315720 ATATCTCCAGCCAAA GGCCAAGCAT ATTG ATGCTTGGCC TTTTTATTGATTGTA TERM 2668 2315720 - 2315743 + F 100 -15.4 -5.2204 | opp_overlap 2315720 ATATCTCCAGCCAAA GGCCAAGCAT ATTG ATGCTTGGCC TTTTTATTGATTGTA Shew185_1939 2315840 - 2316295 + | hypothetical protein TERM 2669 2316455 - 2316484 + T 85 -12.3 -3.14848 | opp_overlap 2316460, overlap 2316460 AAAAGCGCAGAAACA AAAAAGGAGCTGA ATAT TCAGCTCCTTTTC GTTTTGCTAAGGCGC TERM 2670 2316460 - 2316479 + T 100 -12.2 -4.70319 | opp_overlap 2316460, overlap 2316455 CGCAGAAACAAAAAA GGAGCTGA ATAT TCAGCTCC TTTTCGTTTTGCTAA TERM 2671 2316479 - 2316460 - T 100 -12.2 -5.72622 | opp_overlap 2316460 2316455 CGCAGAAACAAAAAA GGAGCTGA ATAT TCAGCTCC TTTTCGTTTTGCTAA TERM 2672 2316490 - 2316516 + T 83 -10.8 -3.68726 | GCTCCTTTTCGTTTT GCTAAGGCGCAG TAG CCACGCCTTAGC TTATATTCCAATGTT Shew185_1940 2317975 - 2316575 - | asparaginyl-tRNA synthetase Shew185_1941 2318126 - 2318461 + | hypothetical protein Shew185_1942 2319113 - 2318526 - | NUDIX hydrolase Shew185_1943 2320557 - 2319145 - | para-aminobenzoate synthase, subunit I Shew185_1944 2320677 - 2322221 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 2673 2322407 - 2322372 - f 100 -7.4 -5.60993 | opp_overlap 2322374, overlap 2322374 TTTGTCACAAAAAAA TACGCTCAGGTTCGCC ATTT GGCTTGCCTGAGCGTT TTTGTTTCGATAGTG TERM 2674 2322374 - 2322405 + F 100 -12.2 -5.30616 | opp_overlap 2322372 2322374 TGTCACAAAAAAATA CGCTCAGGTTCGCC ATTT GGCTTGCCTGAGCG TTTTTGTTTCGATAG TERM 2675 2322405 - 2322374 - f 90 -10 -4.45201 | opp_overlap 2322374, overlap 2322372 TGTCACAAAAAAATA CGCTCAGGTTCGCC ATTT GGCTTGCCTGAGCG TTTTTGTTTCGATAG TERM 2676 2322447 - 2322459 + F 84 -7.7 -4.67904 | opp_overlap 2322447 2322445 2322443 TATCTTCAAAAGATA CGATC TCA GATCG TTTTTAACATTCGTG Shew185_1945 2322543 - 2324594 + | peptidase S9 prolyl oligopeptidase TERM 2677 2324771 - 2324789 + F 100 -13.2 -5.06816 | opp_overlap 2324771 CAGCGTTTTAACAAA GCCAGAAC TCT GTTCTGGC TTTTTATTGCGCCAT TERM 2678 2324789 - 2324771 - f 100 -13.2 -4.1552 | opp_overlap 2324771 CAGCGTTTTAACAAA GCCAGAAC TCT GTTCTGGC TTTTTATTGCGCCAT TERM 2679 2324801 - 2324811 + F 75 -5.4 -4.80167 | TGGCTTTTTATTGCG CCAT GTA ATGG TTTTAATTTTTAATC Shew185_1946 2324838 - 2325296 + | GCN5-related N-acetyltransferase TERM 2680 2325520 - 2325507 - g 71 -4.5 -4.59773 | gap 1 GGCGAGGCTGAAAAA GCC-GC ATG GCTGGC GAGCACCCAAATCAA TERM 2681 2326139 - 2326125 - g 75 -5.7 -4.57073 | GATGCTTTCCAAAAA GCCAT TATCG ATGGC GTGAGCAAAGTGACC Shew185_1947 2325444 - 2326388 + | hypothetical protein TERM 2682 2326380 - 2326394 + T 78 -7.1 -4.36554 | GATTATGTATTGGCG CAGCG TTAGT CGCTG TTTGTTGTAATGCTC TERM 2683 2326544 - 2326571 + T 81 -11.4 -3.02202 | opp_overlap 2326550, overlap 2326550 CTGAACATCACGCAG TAAAAAGCCCTC ATTC GAGGGCTTTTTC ATTTATGTCGCGCTG TERM 2684 2326565 - 2326550 - T 93 -10.4 -4.75372 | opp_overlap 2326544 2326550 ATCACGCAGTAAAAA GCCCTC ATTC GAGGGC TTTTTCATTTATGTC TERM 2685 2326550 - 2326565 + T 93 -10.4 -5.07011 | opp_overlap 2326550, overlap 2326544 ATCACGCAGTAAAAA GCCCTC ATTC GAGGGC TTTTTCATTTATGTC Shew185_1948 2329229 - 2326626 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2686 2326767 - 2326793 + g 83 -13 -3.05384 | opp_overlap 2326770, overlap 2326770 ATCTAACTTGGCGAG GAAGTCGGCTTC GTT GACGCCGGCTTC TTGGATAGAAGCAGG TERM 2687 2326770 - 2326790 + g 74 -8.9 -3.67597 | opp_overlap 2326770, overlap 2326767 TAACTTGGCGAGGAA GTCGGCTTC GTT GACGCCGGC TTCTTGGATAGAAGC TERM 2688 2329124 - 2329093 - G 71 -10.1 -2.91264 | opp_overlap 2329097, overlap 2329051 TTCGCCAGCGAGATA CGCGCATCGGC AGCGGCAAGG GCCGCTGCGCG GAAAATTTTATCGAC TERM 2689 2329277 - 2329248 - H 91 -11 -4.62302 | opp_overlap 2329247 2329245 2329248 2329250 TAATACTCCTAAAAA GATTTAGTGAAT CAAGGC ATTCACTAAATC CTCTTTATGGTAGAA TERM 2690 2329248 - 2329277 + H 76 -11 -2.74122 | opp_overlap 2329248, overlap 2329247 2329245 2329250 TAATACTCCTAAAAA GATTTAGTGAAT CAAGGC ATTCACTAAATC CTCTTTATGGTAGAA TERM 2691 2329561 - 2329571 + G 80 -2.6 -5.46657 | ACTTGGAGTTAACTC TTTA CGT TAAA TTTTTTCTTGGCCTA Shew185_1949 2329548 - 2330180 + | hypothetical protein TERM 2692 2330225 - 2330247 + F 100 -5.5 -5.98675 | opp_overlap 2330225 CTTCTTTTACTAAAA CGCATTGGA GTTTA TCCCGTGCG TTTTTTGTTTTTATC TERM 2693 2332051 - 2332061 + G 71 -8.2 -3.63515 | AGGGGAAATGGGCCG CGGC TTT GCCG TTGTTGCCGATGAAG Shew185_1950 2330474 - 2332468 + | methyl-accepting chemotaxis sensory transducer TERM 2694 2332811 - 2332777 - T 100 -13 -4.06502 | opp_overlap 2332778 2332782, overlap 2332778 2332782 CACCGCCAAATTAAA GCAAAGGGAATCAGTA TCT TACTGGTTCCCTTTGT TGCTCTGGGACCTAT TERM 2695 2332810 - 2332778 - T 100 -16.5 -3.03419 | opp_overlap 2332778 2332782, overlap 2332777 2332782 ACCGCCAAATTAAAG CAAAGGGAATCAGTA TCT TACTGGTTCCCTTTG TTGCTCTGGGACCTA TERM 2696 2332778 - 2332810 + T 100 -18.7 -3.2614 | opp_overlap 2332777 2332778 2332782, overlap 2332782 ACCGCCAAATTAAAG CAAAGGGAATCAGTA TCT TACTGGTTCCCTTTG TTGCTCTGGGACCTA TERM 2697 2332806 - 2332782 - T 93 -11.5 -4.17878 | opp_overlap 2332782 2332778, overlap 2332778 2332777 CCAAATTAAAGCAAA GGGAATCAGTA TCT TACTGGTTCCC TTTGTTGCTCTGGGA TERM 2698 2332782 - 2332806 + T 100 -13.7 -4.29106 | opp_overlap 2332778 2332777 2332782, overlap 2332778 CCAAATTAAAGCAAA GGGAATCAGTA TCT TACTGGTTCCC TTTGTTGCTCTGGGA Shew185_1951 2334087 - 2332795 - | phage integrase family protein Shew185_1952 2334299 - 2334087 - | hypothetical protein TERM 2699 2334238 - 2334221 - G 71 -8.5 -3.72893 | opp_overlap 2334221 CAGCCTCGGAGGAAA TGCCAAA CACA TTTGGCA TTAAATTGCCACGAA TERM 2700 2334400 - 2334411 + r 76 -2.2 -5.42265 | AGCTGTTTTCTAATA TCGT TAAC ACGG TTTTTTGTCATTTAC Shew185_1953 2334750 - 2334403 - | GP46 Shew185_1954 2335355 - 2334747 - | hypothetical protein Shew185_1955 2335582 - 2335352 - | hypothetical protein Shew185_1956 2335857 - 2335579 - | hypothetical protein TERM 2701 2335759 - 2335741 - G 73 -10.2 -3.20164 | opp_overlap 2335741 2335740 2335746 GTACAGGCAATCTAA CGCGCCGA GCG CCAGCGCG ATTTTGATGCTGTCG Shew185_1957 2336151 - 2335858 - | hypothetical protein Shew185_1958 2337013 - 2336363 - | hypothetical protein Shew185_1959 2337399 - 2337010 - | hypothetical protein Shew185_1960 2338025 - 2337396 - | hypothetical protein Shew185_1961 2338403 - 2338056 - | hypothetical protein TERM 2702 2338323 - 2338347 + g 75 -5.7 -4.57569 | gap 1, overlap 2338327 TTGACGGCGGTTAGG GTGC-GCGCC CACTGA GGTGCTGCAC TTTTTGGCCGCCTGC Shew185_1962 2338894 - 2338544 - | hypothetical protein TERM 2703 2338964 - 2338977 + H 71 -5.3 -4.62069 | opp_overlap 2338964, overlap 2338958 ACTCGCAAGGTAAAT GTTAG TTTA CTAAC TTTTTACAGTCAAGC TERM 2704 2338992 - 2339019 + H 74 -4.2 -5.00884 | opp_overlap 2338999, overlap 2338996 2338999 CTTTTTACAGTCAAG CAATAAAGTTAG TTTT CTAACTTATTTG TTTTTTGGGGGAAAT TERM 2705 2338996 - 2339015 + H 72 -3.6 -5.04249 | opp_overlap 2338999, overlap 2338992 2338999 TTACAGTCAAGCAAT AAAGTTAG TTTT CTAACTTA TTTGTTTTTTGGGGG TERM 2706 2338999 - 2339012 + H 71 -5.3 -4.59882 | opp_overlap 2338999, overlap 2338996 2338992 CAGTCAAGCAATAAA GTTAG TTTT CTAAC TTATTTGTTTTTTGG Shew185_1963 2339481 - 2339690 + | hypothetical protein TERM 2707 2339729 - 2339714 - T 72 -9 -3.31322 | opp_overlap 2339714 TCTAATTTGTTAGAA GGGCAT GCAG ATGCCC TTATTAATCTCATCG TERM 2708 2339714 - 2339729 + T 76 -9 -3.78778 | opp_overlap 2339714 TCTAATTTGTTAGAA GGGCAT GCAG ATGCCC TTATTAATCTCATCG Shew185_1964 2340840 - 2339878 - | hypothetical protein Shew185_1965 2342076 - 2341285 - | putative phage repressor Shew185_1966 2342125 - 2342328 + | hypothetical protein Shew185_1967 2342360 - 2342983 + | hypothetical protein TERM 2709 2342988 - 2342968 - f 72 -9.7 -3.02461 | overlap 2342984 CAAGGCGGCGCAATA CGCGGTC GAGAAGT GACCGCG ATGCCGCAATCGAAC TERM 2710 2343273 - 2343303 + G 74 -9.1 -3.6579 | gap 1, opp_overlap 2343271 2343272, overlap 2343262 2343261 2343273 GTCGGGCTCGAAACG C-GCCGTTTGTGCC AATG GGCATAAATGGCAG TTGTTGAAATGACTT Shew185_1968 2342989 - 2343315 + | hypothetical protein Shew185_1969 2343479 - 2344201 + | hypothetical protein TERM 2711 2344786 - 2344771 - g 74 -9 -3.73224 | TGAGGGTGCAGCAAA TGCACC CATG GGTGCA GGAGATTCACCCTCT Shew185_1970 2344346 - 2345203 + | putative replication protein Shew185_1971 2345200 - 2345883 + | replication P family protein Shew185_1972 2345873 - 2346097 + | hypothetical protein TERM 2712 2346976 - 2347012 + G 75 -3.6 -5.06414 | gap 1, opp_overlap 2346993 ACTCATCACCCATTA CGCCCACTGGCAATACA CGCA TGTGG-GCAAGCGGGCG TTTTTGTTCCCAGGC Shew185_1973 2346098 - 2347366 + | phage integrase family protein Shew185_1974 2347427 - 2347642 + | XRE family transcriptional regulator Shew185_1975 2347632 - 2347991 + | hypothetical protein TERM 2713 2348014 - 2347999 - f 72 -10.4 -2.6953 | overlap 2347991 2347998 TGAATTAGAAGGAAC GCCCTC TTGC GAGGGC TGGCGGGTTAGACGG TERM 2714 2350881 - 2350864 - g 80 -4.1 -5.20216 | GACATCATCAAAAAA GGCTTTG GTGG CAAACCC CAGTACGAACAAGCC Shew185_1976 2348461 - 2350938 + | EcoEI R domain-containing protein Shew185_1977 2351026 - 2352528 + | N-6 DNA methylase TERM 2715 2352993 - 2353003 + G 73 -5.4 -4.64676 | TCTAGCTTTTTTGAT GGAA ATA TTCC TTTTATTGGGCCTGG TERM 2716 2353776 - 2353755 - g 80 -3 -5.52347 | AATAAAATTAAAAAA CAATCGGA AGTAAA TCCTATTG GCGAAGTAGTCGTTT Shew185_1978 2352528 - 2354378 + | restriction modification system DNA specificity subunit TERM 2717 2354479 - 2354500 + G 70 -9.5 -3.21218 | AGTTCTTTACCGTGG GCGAGTTAT TGGC GTAACTCGC TTGCTGATGCCGAAT TERM 2718 2356243 - 2356233 - g 100 -5.4 -5.60993 | opp_overlap 2356233 CGGTTTAGAAAAAAA CACA TGG TGTG ATCTTGATGTTGTCG TERM 2719 2356277 - 2356267 - g 83 -4.6 -5.24129 | opp_overlap 2356267 GTTGTCGATAAAAAA GCCG ATA CAGC TATTCGTTTTTTGAT TERM 2720 2357302 - 2357325 + G 76 -2.5 -5.1971 | AGTATGTTAAATGTT GCTATCT CACGAGCCAA AGATAGC TTTTTAGTTTTTGGT Shew185_1979 2354452 - 2357988 + | phospholipase D/transphosphatidylase TERM 2721 2358148 - 2358129 - f 100 -13.6 -5.24531 | opp_overlap 2358147 ATCTGTCATAAAAAA GCGAACCC ATTC GGGTTCGC GTGTAAGTGGTTAAC TERM 2722 2359390 - 2359376 - g 74 -2.8 -5.02476 | ACAGGTTCGAAAAAA GGCATT TAT AACACC TCATATGTGGAAGGT Shew185_1980 2358338 - 2360155 + | GTPase subunit of restriction endonuclease-like protein Shew185_1981 2360142 - 2361428 + | hypothetical protein TERM 2723 2361678 - 2361714 + F 71 -6.6 -4.0174 | opp_overlap 2361674 2361684, overlap 2361674 AACCAATCTAACAAT GTATAATCCGGCCCTG AATGC CAGGGTGAGATTATGC TTTGTAAATTATCTT TERM 2724 2362342 - 2362358 + G 74 -10.9 -2.91322 | overlap 2362338 CAAATTGGCACTGTT GCTAGTG CTG CACTAGC TCATTTCGCCACTCT Shew185_1982 2362309 - 2362644 + | XRE family transcriptional regulator Shew185_1983 2362631 - 2363893 + | HipA domain-containing protein TERM 2725 2364386 - 2364371 - f 76 -9 -3.66178 | opp_overlap 2364370 2364371 GGTTTCAACTGCAAA CCGGAT ATAG ATCCGG ATTCTTATTGTGAAA TERM 2726 2364493 - 2364479 - g 95 -7.8 -5.52384 | opp_overlap 2364478 2364479 CCTTGATGAAAAAAA CGACCC CAC GGATCG CTTCTTACAGGCTGT TERM 2727 2366286 - 2366271 - g 80 -4.6 -5.1485 | overlap 2366272 CAAGCAATAGAAAAA TCCTCC ATTT GGAGGC AAGGTTATTTAAAAG Shew185_1984 2364429 - 2366579 + | hypothetical protein Shew185_1985 2366703 - 2367647 + | radical SAM domain-containing protein Shew185_1986 2367657 - 2367977 + | hypothetical protein TERM 2728 2368079 - 2368098 + F 83 -5 -5.28778 | opp_overlap 2368079 GTATATACATTGAAA GCGAAC CAGAGGGA GTTCGC TTTTTTGTAACTCAT TERM 2729 2368661 - 2368672 + G 73 -2.2 -5.1287 | overlap 2368640 AAAGGTGATTTAGCG CCTT TGAT GAGG TTTTTTAAATCTAGA Shew185_1987 2368352 - 2369140 + | peptidase S1 and S6 chymotrypsin/Hap Shew185_1988 2369252 - 2369632 + | hypothetical protein TERM 2730 2369838 - 2369819 - T 100 -13.6 -4.30576 | TTTGCAGTATGAAAA GCGAACCC CTTC GGGTTCGC AAGTAAGTGGCTAAC Shew185_1989 2370278 - 2369880 - | hypothetical protein Shew185_1990 2370533 - 2371321 + | hypothetical protein Shew185_1991 2371314 - 2372249 + | hypothetical protein TERM 2731 2372358 - 2372341 - T 100 -11.3 -6.01187 | AAGCAAATAAAAAAA GCGAACC GTGA GGTTCGC TAGTAGGTGATTATT Shew185_1992 2372779 - 2372369 - | hypothetical protein Shew185_1993 2373073 - 2372816 - | hypothetical protein Shew185_1994 2374042 - 2375358 + | hypothetical protein Shew185_1995 2375378 - 2375908 + | hypothetical protein TERM 2732 2376043 - 2376057 + G 77 -4.2 -5.00884 | CCTGTTGACCGCAGT GGTTAC ATG GAAACC TTTTTTAAAGCCAAT TERM 2733 2377597 - 2377609 + G 71 -4.7 -4.58424 | opp_overlap 2377589 2377593, overlap 2377593 GAATATACCAAGGCT CCGCC TGC GCCGG TTTTCTATGGTGATA Shew185_1996 2375905 - 2377893 + | glucose-methanol-choline oxidoreductase TERM 2734 2378716 - 2378687 - g 86 -12.3 -3.55486 | gap 1, overlap 2378680 2378678 2378685 2378715 ACGCAACACCAAACA GCTGGTGTGCAGTA ATT TACC-CACACCAGC ACCCAATGTTGCATA Shew185_1997 2377998 - 2379011 + | hypothetical protein Shew185_1998 2380094 - 2379195 - | hypothetical protein TERM 2735 2380047 - 2380032 - G 73 -4.6 -4.66537 | overlap 2380033 GTCTTCAATAGAAAA TGCTGC CATC GCAGCC ACCATAAACAGACTA TERM 2736 2380761 - 2380785 + r 95 -13.6 -3.74526 | CACAGTTTATGAGTG TGGTGCACGC GCGCG GCGTGCGCCA TTATTGAGTTACTGC Shew185_1999 2381963 - 2380794 - | isoaspartyl dipeptidase Shew185_2000 2383408 - 2381963 - | hypothetical protein TERM 2737 2383472 - 2383439 - R 100 -15.4 -3.81022 | AAAGTGTCAGAACAA GGCATTGGCCACAA TTAACG CTGCGGCCAATGCC TCAAGTCAGTGCATT Shew185_2001 2386089 - 2383486 - | TonB-dependent receptor TERM 2738 2387949 - 2387938 - g 72 -5.8 -4.43877 | opp_overlap 2387937 TAACTCTGAAATAAA TGCG GTTT CGCA CTATCTCACTCCGGG Shew185_2002 2386607 - 2388232 + | cyanophycinase-related exopeptidase-like protein TERM 2739 2388539 - 2388505 - T 91 -9.4 -4.53705 | opp_overlap 2388508, overlap 2388508 AACCGCTACAGAAAA GAATGTATCGTTCAGC AAA ACTGAGCGATACATTA TATCAAAATAAATTT TERM 2740 2388508 - 2388536 + T 90 -12.6 -3.49475 | opp_overlap 2388505 2388508 CGCTACAGAAAAGAA TGTATCGTTCAG CAAAA CTGAGCGATACA TTATATCAAAATAAA TERM 2741 2388536 - 2388508 - T 91 -11.1 -4.38141 | opp_overlap 2388508, overlap 2388505 CGCTACAGAAAAGAA TGTATCGTTCAGC AAA ACTGAGCGATACA TTATATCAAAATAAA Shew185_2003 2389070 - 2388570 - | peptidyl-prolyl cis-trans isomerase cyclophilin type Shew185_2004 2390571 - 2389168 - | DEAD/DEAH box helicase domain-containing protein TERM 2742 2389863 - 2389882 + g 77 -2.8 -5.24799 | overlap 2389876 CTTGCTCAGTGATGA GTTTGCTT AACA GGGCAGAC TTTTTGTCTTTATCG TERM 2743 2390638 - 2390616 - H 73 -7.1 -4.01939 | gap 1 TAATGTATAAGCAAA CTGTT-ACGC CAAC GCGTTAACAG CGGAGCAGGGTGATA Shew185_2005 2391209 - 2392981 + | hypothetical protein TERM 2744 2393021 - 2393004 - T 81 -11.3 -3.07132 | opp_overlap 2393004, overlap 2393001 TATTGATATAAATTA GCAGAGC TCAT GCTCTGC TTTTTTTATGCCGAA TERM 2745 2393004 - 2393021 + T 100 -11.3 -5.60993 | opp_overlap 2393004 2393001 TATTGATATAAATTA GCAGAGC TCAT GCTCTGC TTTTTTTATGCCGAA TERM 2746 2393132 - 2393171 + T 82 -11.8 -2.9518 | gap 1, opp_overlap 2393115 2393126 GCAAGCAGATCCTAT TGCCATATAACTGAAAAAT TAT ATATTTC-GTTATATGGCA TATGTAGGTGTTAGC Shew185_2006 2393551 - 2393231 - | hypothetical protein TERM 2747 2393957 - 2393935 - g 73 -4.8 -4.72188 | overlap 2393937 CTAAGGTAAAAGAAA TACTTGCACA GGA TGGGCAAGGA AAAGTTTTGGTTGTC Shew185_2007 2393784 - 2394278 + | ribonuclease activity regulator protein RraA TERM 2748 2394757 - 2394741 - g 74 -6.5 -4.34759 | GATAATAGTAAGAAA GCCGC AACTCCA GCGGC CGAAACTTCCTCAAA Shew185_2008 2394336 - 2396159 + | AsmA family protein TERM 2749 2396169 - 2396185 + G 74 -10.9 -2.94411 | overlap 2396168 TTCTAATGGTTGCTC CAATGCG CTA CGCATTG CTTGTTTGCGCGAGT Shew185_2009 2396159 - 2396779 + | intracellular proteinase inhibitor domain-containing protein TERM 2750 2396819 - 2396844 + T 100 -15.5 -5.27206 | opp_overlap 2396819 CTCATAATAGAAAAA GGCAGCAATCC AATA GGGTTGCTGCC TTTTTGTTATCTGTG TERM 2751 2396844 - 2396819 - T 100 -13.3 -5.1523 | opp_overlap 2396819 CTCATAATAGAAAAA GGCAGCAATCC AATA GGGTTGCTGCC TTTTTGTTATCTGTG Shew185_2010 2398466 - 2396919 - | MltD domain-containing protein TERM 2752 2397275 - 2397287 + g 75 -7.7 -4.1673 | TTTTTGTCGATTCAG TCGCA GCG TGCGA TTTCTTCGGCAATTG Shew185_2011 2399490 - 2398699 - | hydroxyacylglutathione hydrolase Shew185_2012 2399645 - 2400382 + | methyltransferase type 11 TERM 2753 2401280 - 2401290 + G 77 -4 -5.1287 | CAAGCTTTTGTGCAG TTCT GTG AGAA TTTTTTCAATATCGC Shew185_2013 2400416 - 2401354 + | LysR family transcriptional regulator TERM 2754 2401444 - 2401410 - T 100 -13 -4.49906 | opp_overlap 2401402, overlap 2401411 GAATAGTGAAATAAA TCATCACGCCTAAG TGTTAAG CTTAGGCGTGATGG CATAGAACTTACTTT TERM 2755 2401443 - 2401411 - T 100 -16.5 -3.28859 | opp_overlap 2401402, overlap 2401410 AATAGTGAAATAAAT CATCACGCCTAAG TGTTAAG CTTAGGCGTGATG GCATAGAACTTACTT Shew185_2014 2402008 - 2401538 - | ribonuclease H TERM 2756 2401720 - 2401738 + g 90 -6 -5.4505 | TTTTGACTGGGGTAC GGTTTGAT GTC ATCCAACC TTTTTTCTTCCAGCC TERM 2757 2402557 - 2402577 + G 74 -8.9 -3.76224 | TGGTGTGGATACGTC GCGCCGCGA ATA TCACGGTGC TTTGCTCGATGCCGA Shew185_2015 2402078 - 2402806 + | DNA polymerase III, epsilon subunit Shew185_2016 2402817 - 2404190 + | hypothetical protein TERM 2758 2404317 - 2404346 + F 90 -11.5 -3.96469 | gap 1, opp_overlap 2404319, overlap 2404319 AAATCTAAGTAAAAA AACGGTTGACGCCC GCA GGGC-TCAACCGTA TTATTCTTCGCATCT TERM 2759 2404319 - 2404344 + F 100 -14.1 -3.5672 | gap 1, opp_overlap 2404319, overlap 2404317 ATCTAAGTAAAAAAA CGGTTGACGCCC GCA GGGC-TCAACCG TATTATTCTTCGCAT TERM 2760 2404344 - 2404319 - f 100 -14.1 -5.64006 | gap 1, opp_overlap 2404319 2404317 ATCTAAGTAAAAAAA CGGTTGACGCCC GCA GGGC-TCAACCG TATTATTCTTCGCAT TERM 2761 2404601 - 2404560 - f 95 -13.3 -3.53012 | opp_overlap 2404560 2404570, overlap 2404561 2404570 GTCCGCTCCGCCAAA TTAATAAAAAGGCCTTACA GCAA TGTAAGGCCTTTTTATTTC TATCTTTTTCATCAA TERM 2762 2404560 - 2404601 + F 95 -13.3 -3.57901 | opp_overlap 2404560 2404561 2404570, overlap 2404570 GTCCGCTCCGCCAAA TTAATAAAAAGGCCTTACA GCAA TGTAAGGCCTTTTTATTTC TATCTTTTTCATCAA TERM 2763 2404600 - 2404561 - f 100 -16.8 -2.71712 | opp_overlap 2404560 2404570, overlap 2404560 2404570 TCCGCTCCGCCAAAT TAATAAAAAGGCCTTACA GCAA TGTAAGGCCTTTTTATTT CTATCTTTTTCATCA TERM 2764 2404570 - 2404591 + F 100 -13.1 -5.4433 | opp_overlap 2404570 2404561 2404560, overlap 2404560 CCAAATTAATAAAAA GGCCTTACA GCAA TGTAAGGCC TTTTTATTTCTATCT TERM 2765 2404591 - 2404570 - f 100 -13.1 -5.24551 | opp_overlap 2404560 2404570, overlap 2404561 2404560 CCAAATTAATAAAAA GGCCTTACA GCAA TGTAAGGCC TTTTTATTTCTATCT TERM 2766 2405021 - 2405037 + G 73 -3.6 -4.86731 | CTTTCCGATCATTTC TCTCGG GGTTG CCGTGA TTTTGTTTGAAGGCG TERM 2767 2406714 - 2406691 - g 72 -11 -2.57463 | opp_overlap 2406681, overlap 2406679 2406690 AATCCGCCGCAGAAG CCGCTTTAGC GAAG GCAAAAGCGG AAGAGGAGGCTGAGC Shew185_2017 2404833 - 2406815 + | sodium/hydrogen exchanger Shew185_2018 2406908 - 2408197 + | acetamidase/formamidase TERM 2768 2408466 - 2408502 + T 74 -8.9 -3.53811 | overlap 2408468 2408469 AGACTTGAGTTACTT GATGTTGTCATAAAGAA GTC TTCTTTATGTCAACGTA TTTCAGGACGGTACA TERM 2769 2408468 - 2408500 + T 85 -11.5 -3.34715 | overlap 2408466 2408469 ACTTGAGTTACTTGA TGTTGTCATAAAGAA GTC TTCTTTATGTCAACG TATTTCAGGACGGTA TERM 2770 2408469 - 2408499 + T 83 -12.8 -2.60615 | overlap 2408468 2408466 CTTGAGTTACTTGAT GTTGTCATAAAGAA GTC TTCTTTATGTCAAC GTATTTCAGGACGGT TERM 2771 2408527 - 2408556 + T 90 -12.3 -3.56937 | opp_overlap 2408533, overlap 2408533 GGTACAATAGGCATT AAAAAAGGAGGCT AATT AGCCTCCTTTTTG TTGGTTTAAATCTTA TERM 2772 2408533 - 2408550 + T 100 -11.3 -5.24551 | opp_overlap 2408533, overlap 2408527 ATAGGCATTAAAAAA GGAGGCT AATT AGCCTCC TTTTTGTTGGTTTAA TERM 2773 2408550 - 2408533 - T 95 -11.3 -5.17353 | opp_overlap 2408533 2408527 ATAGGCATTAAAAAA GGAGGCT AATT AGCCTCC TTTTTGTTGGTTTAA Shew185_2019 2411028 - 2408581 - | acyl-CoA dehydrogenase TERM 2774 2410990 - 2410976 - G 70 -10 -3.1875 | overlap 2410980 GATACCCGAAGGTAA GCTAGG GCT CCTAGC ACTAAGATCATGGCG Shew185_2020 2411272 - 2412051 + | glutamine amidotransferase class-II TERM 2775 2412444 - 2412480 + T 73 -10.4 -2.76261 | overlap 2412443 2412446 GCTTAGGCTTTGTAT CATTGAGCTAAGTTGA TTTCC TTAACTTAACTCAATG CTTTGCCAGTTAACC Shew185_2021 2413365 - 2412490 - | hypothetical protein TERM 2776 2412663 - 2412688 + g 76 -2.5 -5.18726 | gap 1 GGTAGGCTAAGTCTG GCGCC-ATCC AGAAGAA GGTTTGGCGC TTTTTATTGTCACGC TERM 2777 2413513 - 2413503 - R 79 -6.8 -4.6038 | TATATTAAACTAAAA TGGC ATT GCCA TGACTAAAGTGACCA Shew185_2022 2413940 - 2413497 - | methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding TERM 2778 2414023 - 2414012 - H 70 -5.8 -4.39166 | opp_overlap 2414017, overlap 2414013 GGTCACACAGTAAAA GTCG CCCG CGAC GAGGTTGGGTTAGTG Shew185_2023 2414236 - 2414727 + | peptide deformylase TERM 2779 2414788 - 2414807 + F 100 -10 -5.4251 | GACACTACCTGACTA GCCGCATT TTAT GATGCGGC TTTTTTGTATCTAAA Shew185_2024 2414982 - 2415827 + | hypothetical protein TERM 2780 2416065 - 2416052 - f 70 -2.5 -5.03945 | TAACAAGGAGAAAAA TTAAA TGGA TTTAA ATTCACTATTACTGT TERM 2781 2416430 - 2416442 + G 77 -4.9 -4.91573 | TAGTGTACTTAACCC TAAAG TCG CTTTA TTTTTCCTCTCTTTT Shew185_2025 2416056 - 2416682 + | lysine exporter protein LysE/YggA Shew185_2026 2417882 - 2416878 - | glycine betaine transporter periplasmic subunit TERM 2782 2417021 - 2417034 + g 71 -3.1 -4.87133 | gap 1, opp_overlap 2417021, overlap 2417023 ATACCTCAAAAAACT TCCTCG CGG CG-GGA TTTTGTTTAGCGAAT TERM 2783 2417152 - 2417162 + g 70 -2.4 -4.85545 | overlap 2417144 ATCCGATCAACGGCA GCAC TCT GGGC TTTTGTTGGTTTGAT Shew185_2027 2418730 - 2417879 - | binding-protein-dependent transport systems inner membrane component Shew185_2028 2419995 - 2418757 - | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 2784 2420099 - 2420083 - H 71 -9.5 -2.80438 | overlap 2420080 2420073 TTAAACATTTAATGA TGAACTC ACA GAGTTCA TAAAAAATGCACAGC Shew185_2030 2421879 - 2423612 + | FAD dependent oxidoreductase Shew185_2031 2423848 - 2425584 + | thiamine pyrophosphate binding domain-containing protein TERM 2785 2426978 - 2426996 + G 76 -11 -3.20901 | ATTTCTTGGCATTAT TGGCAGCT TCA GGCTGCCA TTCACTTGATGAAAT Shew185_2032 2425684 - 2427093 + | ferredoxin-dependent glutamate synthase Shew185_2033 2427323 - 2427114 - | hypothetical protein Shew185_2034 2428022 - 2427639 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2786 2428111 - 2428142 + r 90 -12.4 -3.60948 | opp_overlap 2428114, overlap 2428114 CTGTTCTTATTAGAT TAAGACCCATCATC CTAA GATGGCGGGTCTTA TTTCGCAATGTGTTA TERM 2787 2428139 - 2428114 - R 75 -9.7 -3.29471 | opp_overlap 2428111 2428114 TTCTTATTAGATTAA GACCCATCATC CTAA GATGGCGGGTC TTATTTCGCAATGTG TERM 2788 2428114 - 2428139 + r 83 -9.7 -3.93256 | opp_overlap 2428114, overlap 2428111 TTCTTATTAGATTAA GACCCATCATC CTAA GATGGCGGGTC TTATTTCGCAATGTG Shew185_2035 2430415 - 2428205 - | alpha amylase catalytic region TERM 2789 2428522 - 2428565 + g 76 -9.6 -3.64184 | gap 1, opp_overlap 2428519, overlap 2428527 TCGGAGATATCACCT CGAAGCGGGCAAAGGCGA-AG GTG CTGTCGTCATAGCCTGTTTCG TTTGCAGTGCTCTTT TERM 2790 2429619 - 2429629 + g 71 -8.2 -3.63627 | opp_overlap 2429606 AAGGGGTGAGTTTCT CCGC CCA GCGG TTTAAGCTCTGCGGG TERM 2791 2430133 - 2430110 - G 79 -9.6 -3.81951 | overlap 2430111 GTCGATATCATTAAA TTTGCCGACA CCGT TGTCGGCAAT CGTGCCCCAAGGTTT TERM 2792 2430132 - 2430111 - G 81 -13.1 -2.88849 | overlap 2430110 TCGATATCATTAAAT TTGCCGACA CCGT TGTCGGCAA TCGTGCCCCAAGGTT TERM 2793 2430139 - 2430158 + g 75 -3.5 -5.08601 | TGTCGGCAATCGTGC CCCAAGG TTTATT CGTTGGG TTTTTATTGCCATAA Shew185_2036 2432802 - 2430478 - | cyclomaltodextrinase TERM 2794 2432006 - 2432022 + g 87 -10.9 -4.08058 | opp_overlap 2431986 AGGCCAAGCTTGTTA GCCTTAG CGA CTAAGGC TTTATAATCTTCGTT Shew185_2037 2434402 - 2432903 - | tryptophan halogenase TERM 2795 2434510 - 2434487 - R 100 -14 -5.42514 | opp_overlap 2434487, overlap 2434508 TGATAAAGTAAAAAA GCCTCTGTAA CAGG TTACAGAGGC TTTAAGCCGTGCAGG TERM 2796 2434487 - 2434510 + r 95 -14 -3.55444 | opp_overlap 2434487 2434508 TGATAAAGTAAAAAA GCCTCTGTAA CAGG TTACAGAGGC TTTAAGCCGTGCAGG Shew185_2038 2437253 - 2434527 - | TonB-dependent receptor Shew185_2039 2437750 - 2439372 + | alpha amylase catalytic region TERM 2797 2440477 - 2440517 + G 73 -9.8 -3.32022 | gap 1, overlap 2440473 TAATGCCTTTATGGC GGC-GCTACTTGTGGTTGT GGCG ATGACCACCAGTGGCAGCC TTGCTATGTGGGCAA TERM 2798 2440697 - 2440711 + G 76 -7 -4.31433 | CTAGCGGATAACCTT GGCGTG CAA CTCGCC TTTATTCTGCCCGTG Shew185_2040 2439506 - 2440777 + | glucose/galactose transporter TERM 2799 2440820 - 2440803 - f 93 -11.3 -4.2349 | opp_overlap 2440803 GGCTGACACTTAAAA GCGATCC ATTT GGATCGC TTTTTTTATGGCTTT TERM 2800 2440803 - 2440820 + F 100 -11.3 -5.68039 | opp_overlap 2440803 GGCTGACACTTAAAA GCGATCC ATTT GGATCGC TTTTTTTATGGCTTT Shew185_2041 2440922 - 2442136 + | Fmu (Sun) domain-containing protein TERM 2801 2442744 - 2442721 - g 73 -10.4 -3.22274 | gap 1, opp_overlap 2442720 2442726, overlap 2442727 ATCAAAGATACTCAA GGCAAA-GTGC TTG GCACATTTGCC ATGTACTACGATACG TERM 2802 2443524 - 2443510 - g 76 -8.6 -4.07306 | ATAGTCAACCAGAAA GAGTTG GCA CAACTC GCTGAAACAATTAAT Shew185_2042 2442286 - 2444535 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 2803 2444695 - 2444668 - T 100 -13.6 -5.20783 | opp_overlap 2444668 2444674, overlap 2444674 ATTGAAATATAAAAA CAAAAAGAGCGC TTCG GCGCTCTTTTTA TTACTGAAAACGGGT TERM 2804 2444668 - 2444695 + T 82 -11.4 -3.14211 | opp_overlap 2444668 2444674, overlap 2444674 ATTGAAATATAAAAA CAAAAAGAGCGC TTCG GCGCTCTTTTTA TTACTGAAAACGGGT TERM 2805 2444674 - 2444689 + T 93 -10.4 -5.1356 | opp_overlap 2444674 2444668, overlap 2444668 ATATAAAAACAAAAA GAGCGC TTCG GCGCTC TTTTTATTACTGAAA TERM 2806 2444689 - 2444674 - T 100 -10.4 -5.71295 | opp_overlap 2444668 2444674, overlap 2444668 ATATAAAAACAAAAA GAGCGC TTCG GCGCTC TTTTTATTACTGAAA Shew185_2043 2445769 - 2444756 - | D-alanyl-alanine synthetase A TERM 2807 2445010 - 2445031 + g 73 -8 -4.13748 | gap 1 CAGCTGACACATGCT GCGCG-ACC ACATC GGTGCGCGC TTTACTGTTTTTGGC Shew185_2044 2447012 - 2446035 - | diguanylate cyclase TERM 2808 2446981 - 2446967 - G 74 -4.3 -4.98255 | CGGCAAGCATAAAAA GTATC GCTGG GATAC GAGGAATAGAATACT Shew185_2045 2447161 - 2447634 + | GCN5-related N-acetyltransferase Shew185_2046 2449870 - 2447651 - | exodeoxyribonuclease V, alpha subunit Shew185_2047 2453688 - 2449867 - | exodeoxyribonuclease V, beta subunit TERM 2809 2450817 - 2450830 + g 75 -5.3 -4.66163 | CGCCCGGAGCGGCTT TACCA TGGC TGGTA TTTTTAACTAGGCCT TERM 2810 2451649 - 2451666 + g 81 -7.7 -4.58283 | gap 1, opp_overlap 2451648 GGCAAGGCTTAATAG CGCGGGCA TGA TGCC-GCG TTTTTGCCACACTTG TERM 2811 2451711 - 2451697 - G 73 -2.1 -5.15969 | GTGCAAGTTAAAAAA CTGCT CTAAT AACAG CTGTCTGTGCTCTTC TERM 2812 2452131 - 2452145 + g 74 -2.8 -5.08824 | GTCTTAGTCTTAAGG CAGC AGGATTA GCTG TTTTTTCAGTGAGGG TERM 2813 2452693 - 2452678 - G 75 -3.2 -5.00895 | overlap 2452679 CGCACTATACAAAAA CGCC GGTTTAAT GGCG GCAATCAATGTGGCA TERM 2814 2453186 - 2453165 - G 73 -5.1 -4.62069 | overlap 2453167 GCCTCACGCCAAAAA TCCCGCACC GCAT GGTGCAAAA ATTCGCTGTCGTCCA Shew185_2048 2457497 - 2453685 - | exodeoxyribonuclease V, gamma subunit TERM 2815 2457228 - 2457243 + g 71 -9 -3.50853 | CTTCCACGTCATCGC CGCCTT AGTG AAGGCG TTGTCCTTGGGCACA Shew185_2049 2459857 - 2457653 - | transglutaminase domain-containing protein Shew185_2050 2460951 - 2459854 - | hypothetical protein TERM 2816 2459898 - 2459909 + g 70 -2.2 -4.9138 | GACGCTGCTTGCTGG TGGT TTTA GCCA TTTTATTTGAGTGCT Shew185_2051 2461962 - 2461051 - | ATPase TERM 2817 2461800 - 2461786 - G 70 -10 -3.17075 | TCTTTGGTAACTCAA GCCCAA GCT TTGGGC TATGCCATGGGAAAT Shew185_2052 2462852 - 2462148 - | diguanylate phosphodiesterase TERM 2818 2463079 - 2463044 - R 91 -12 -4.11394 | opp_overlap 2463047, overlap 2463047 AGGGTATGCTGAAAA GTAGGAACTCGATACT GCTG AGTATCGAGTTCCTTT TTATGTCGCGAGTTA TERM 2819 2463076 - 2463047 - R 100 -18.1 -3.09004 | opp_overlap 2463047, overlap 2463044 GTATGCTGAAAAGTA GGAACTCGATACT GCTG AGTATCGAGTTCC TTTTTATGTCGCGAG TERM 2820 2463047 - 2463076 + r 100 -18.1 -4.96848 | opp_overlap 2463047 2463044 GTATGCTGAAAAGTA GGAACTCGATACT GCTG AGTATCGAGTTCC TTTTTATGTCGCGAG Shew185_2053 2465017 - 2463092 - | lytic transglycosylase catalytic TERM 2821 2463517 - 2463506 - G 85 -7.2 -4.84918 | CGCATAAAGATAAAA CGCG CTCT CGCG GCGACTGATCGCTCG Shew185_2054 2466720 - 2465164 - | hypothetical protein TERM 2822 2465250 - 2465265 + g 73 -3.2 -4.91511 | overlap 2465252 2465264 TATCGTTGTCGTCTT GGGCTT CATT AAGCGC TTTTTCTAATAGCAT TERM 2823 2466495 - 2466508 + g 74 -9.5 -3.57406 | overlap 2466478 GGCGCTGCTGGTATT GGCGC AGTT GCGCC TCTTTGTCATCAACC TERM 2824 2467038 - 2467027 - g 75 -3.6 -5.03314 | GGTATTCTTAAAAAA GCGC AGTG GCAC ATGCAAGATAACCAA Shew185_2055 2466985 - 2468019 + | putative sulfite oxidase subunit YedY Shew185_2056 2468063 - 2468731 + | putative sulfite oxidase subunit YedZ TERM 2825 2468833 - 2468814 - T 100 -10.8 -5.69262 | opp_overlap 2468814 TTATAAAAACAAAAA TGCCGAAT CAAG ATTCGGCA TTTCTCATTTAGCGA TERM 2826 2468814 - 2468833 + T 88 -10.8 -4.13654 | opp_overlap 2468814 TTATAAAAACAAAAA TGCCGAAT CAAG ATTCGGCA TTTCTCATTTAGCGA Shew185_2057 2469300 - 2468890 - | lactoylglutathione lyase TERM 2827 2469718 - 2469691 - H 85 -12.8 -3.20723 | opp_overlap 2469692 2469698, overlap 2469698 CTTGTACCAAGTTAA GCAAAAAGCCGC TATT GCGGCTTTTTGT TTGTCTGTGATTTAA TERM 2828 2469692 - 2469717 + H 100 -16.3 -4.19024 | opp_overlap 2469691 2469698, overlap 2469698 TTGTACCAAGTTAAG CAAAAAGCCGC TATT GCGGCTTTTTG TTTGTCTGTGATTTA TERM 2829 2469711 - 2469698 - H 93 -9.5 -4.90013 | opp_overlap 2469698 2469692, overlap 2469691 CAAGTTAAGCAAAAA GCCGC TATT GCGGC TTTTTGTTTGTCTGT TERM 2830 2469698 - 2469711 + H 100 -9.5 -5.4433 | opp_overlap 2469691 2469698, overlap 2469692 CAAGTTAAGCAAAAA GCCGC TATT GCGGC TTTTTGTTTGTCTGT Shew185_2058 2469763 - 2470020 + | hypothetical protein Shew185_2059 2470673 - 2470032 - | endonuclease III TERM 2831 2470830 - 2470859 + r 100 -15.9 -3.30441 | gap 1, opp_overlap 2470857 TGTTTTAATTCCAGT CGCTTAA-GTGCGC TAG GCGCACATTAAGCG TTGTACACCATACTC Shew185_2060 2471609 - 2470911 - | SoxR-reducing system protein RsxE Shew185_2061 2472228 - 2471602 - | electron transport complex protein RnfG TERM 2832 2471938 - 2471955 + g 74 -11.3 -3.06183 | TATATTGCCGTTATA GCCATCG GGCG CGATGGC TTCAATGGCGATGGC Shew185_2062 2473346 - 2472297 - | electron transport complex, RnfABCDGE type, D subunit TERM 2833 2472629 - 2472641 + g 71 -4.8 -4.56914 | opp_overlap 2472615 CGCCAGTGCTGATGT GCCA GCGAA TGGC TTTTAGTTTAAGTAA Shew185_2063 2476030 - 2473373 - | electron transport complex protein RnfC TERM 2834 2474155 - 2474182 + g 75 -3.3 -5.09426 | TTTCTGCAGGTTCAA GCGGCGCGGTA TCTGTT TGCTGTGCGGC TTTTTTGGCCTTGGC TERM 2835 2474490 - 2474500 + g 93 -8.2 -5.00884 | CCAGTGACTGCTTGT GCCG CTG CGGC TTTTTTCGCGGCGAT TERM 2836 2474519 - 2474540 + g 77 -4.3 -5.04597 | TTTCGCGGCGATGCG TGCCATGGC TTCG GCGACGGCA TTTTTATCTGTGCCT Shew185_2064 2476638 - 2476024 - | electron transport complex protein RnfB Shew185_2065 2477218 - 2476640 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2837 2477200 - 2477172 - G 91 -11.9 -4.23781 | TTCACTAAAACGAAA TTGTTGACCAGCA CTG TACTGATCAACAA GAGGAGATATTCAGT Shew185_2066 2479248 - 2477344 - | diguanylate cyclase/phosphodiesterase TERM 2838 2478591 - 2478603 + g 80 -4.8 -5.17786 | overlap 2478578 CGGCATCTTGATAGG CTGC TTTAT GCAG TTTTTCATTTTCTTG TERM 2839 2479411 - 2479401 - R 70 -5.4 -4.31549 | overlap 2479403 CAAAACGGAAAAGAA TAGC TTA GCTA GAAGCCAGAAGAAGC TERM 2840 2481130 - 2481098 - R 100 -12.8 -4.88736 | opp_overlap 2481102, overlap 2481102 TAGGATTGATAAAAA CAAAGCCGGAGCAT AAACA ATGCGCCAGCTTTG AAAAAAAGTCATAGG TERM 2841 2481126 - 2481102 - R 86 -7.8 -4.97405 | opp_overlap 2481102, overlap 2481098 ATTGATAAAAACAAA GCCGGAGCAT AAACA ATGCGCCAGC TTTGAAAAAAAGTCA Shew185_2067 2481924 - 2481181 - | putative phage repressor TERM 2842 2482125 - 2482153 + H 100 -19.1 -2.7386 | opp_overlap 2482130, overlap 2482128 2482152 TCGGATCTATATTCG CAATACGTTACGC AGT GCGTAACGTATTG TAGTTAAACTGCGTT TERM 2843 2482128 - 2482150 + H 100 -15 -3.51825 | opp_overlap 2482130, overlap 2482125 GATCTATATTCGCAA TACGTTACGC AGT GCGTAACGTA TTGTAGTTAAACTGC TERM 2844 2482148 - 2482130 - H 91 -13.2 -3.05343 | opp_overlap 2482128 2482125 TCTATATTCGCAATA CGTTACGC AGT GCGTAACG TATTGTAGTTAAACT TERM 2845 2482982 - 2482965 - g 71 -6.9 -4.25848 | AAGGTCTTAGCAAAA GAGGGCG TTAG CGCACTC GCAGGCAAATACAAA TERM 2846 2484360 - 2484335 - g 71 -6.3 -4.28018 | gap 1, overlap 2484336 2484355 2484359 AATAGCCCATCAAAA CCCCAGCTTAAT GGC ATTAA-CTGAGG CTGCAGAGCAGCTCG TERM 2847 2484667 - 2484619 - g 71 -8.2 -3.76968 | overlap 2484622 AACGCATTGATGAAA TCATGGGCCATAAGCGCAGAGC GACCA ACTGAGCACTTATGACCCACAA CGGCCATGAAGGCCA Shew185_2068 2482434 - 2484650 + | integrase catalytic region Shew185_2069 2484711 - 2485433 + | prophage MuSo1, DNA transposition protein, putative Shew185_2070 2485490 - 2485975 + | hypothetical protein TERM 2848 2486129 - 2486105 - g 73 -10.1 -3.24721 | opp_overlap 2486123, overlap 2486103 AATACAAAGGCAATA TCGACACCATT AAA AATCGTGTCGA AGGGCGCTACTTACG Shew185_2071 2485972 - 2486487 + | hypothetical protein TERM 2849 2486517 - 2486501 - g 78 -5.1 -4.93288 | AACATGCAAACAAAA GCTATCA ATG TGATTGC CGCCTTAAGGCTTCG Shew185_2072 2486489 - 2486701 + | hypothetical protein TERM 2850 2487275 - 2487250 - g 71 -8.3 -3.65902 | opp_overlap 2487251, overlap 2487251 2487253 CCGACGCGATTCAAA TCACAGGTACT AGCC AGTACCTGCGT TTATATGAGCGTCAA TERM 2851 2487251 - 2487274 + G 81 -9.6 -4.04206 | opp_overlap 2487251 2487250 2487253 CGACGCGATTCAAAT CACAGGTACT AGCC AGTACCTGCG TTTATATGAGCGTCA TERM 2852 2487274 - 2487251 - g 76 -11.8 -2.79327 | opp_overlap 2487251, overlap 2487250 2487253 CGACGCGATTCAAAT CACAGGTACT AGCC AGTACCTGCG TTTATATGAGCGTCA TERM 2853 2487272 - 2487253 - g 74 -10.8 -2.94322 | opp_overlap 2487251, overlap 2487251 2487250 ACGCGATTCAAATCA CAGGTACT AGCC AGTACCTG CGTTTATATGAGCGT Shew185_2073 2486703 - 2487338 + | hypothetical protein TERM 2854 2487587 - 2487603 + G 76 -2.2 -5.24129 | overlap 2487590 AGTTTGCGGGTGAAC GGCG CGCTGTAAT CGCC TTTTTTATGGAGAAA Shew185_2074 2487358 - 2487666 + | hypothetical protein TERM 2855 2487677 - 2487700 + F 82 -11.8 -3.04537 | gap 1, opp_overlap 2487677 TTTAACCCTGCGAAA CC-CGCTCCAT AGC ATGGAGCGAGG TCTGTCTAATGTAGT TERM 2856 2487699 - 2487677 - f 100 -14.2 -3.55622 | opp_overlap 2487677 TTTAACCCTGCGAAA CCCGCTCCAT AGC ATGGAGCGAG GTCTGTCTAATGTAG Shew185_2075 2487757 - 2487978 + | hypothetical protein TERM 2857 2488020 - 2487993 - g 83 -6.9 -4.95957 | overlap 2488010 2488011 GAAACTAATCAAAAA GCCCCTGTGCA GACTAA TGCGCAGGCGC ACCCAGTCGCTCAAC TERM 2858 2488243 - 2488228 - g 74 -3.9 -4.95167 | opp_overlap 2488231, overlap 2488223 2488239 TAACCAACAATAAAA CAGCG GTTAAA CGCCG TTTAAGTCCTGCGGC Shew185_2076 2487972 - 2488592 + | hypothetical protein Shew185_2077 2488585 - 2489040 + | Mor transcription activator domain-containing protein Shew185_2078 2489087 - 2489617 + | hypothetical protein Shew185_2079 2489656 - 2490102 + | hypothetical protein TERM 2859 2490140 - 2490119 - T 89 -5.9 -5.37345 | opp_overlap 2490119 TTTAAGTACAAAAAA GCACAAG ATTTCACA CTTGTGC TTTATCTACTAGTTT Shew185_2080 2490877 - 2490149 - | hypothetical protein TERM 2860 2490528 - 2490542 + g 77 -8.6 -4.25256 | opp_overlap 2490526 2490528, overlap 2490525 AGTAGACCATCAATA TCCTCA TCA TGAGGA TTGTTTTGATCAACA TERM 2861 2490976 - 2491007 + H 100 -16 -5.94713 | opp_overlap 2490985 CTCCAAACCCTTAAG CCGAGACAATGAAC CTAT GTTCACTGTCTCGG TTTTTTTTATGGCCT Shew185_2081 2491016 - 2491339 + | hypothetical protein Shew185_2082 2491329 - 2491895 + | glycoside hydrolase family protein TERM 2862 2491912 - 2491930 + G 70 -2.5 -4.87665 | gap 1, overlap 2491920 TCCCTCACAAATCAT TAG-CACT GTGC AGTGGCTA TTTTTGTCACTGGCA TERM 2863 2492116 - 2492096 - g 71 -7.5 -4.08767 | overlap 2492085 2492102 CGCATTGCCCTAAAA GACGAAGGC GAA ACCCTCGCC CTACAGGTGCAAACC Shew185_2083 2491892 - 2492476 + | hypothetical protein Shew185_2084 2492573 - 2492797 + | zinc finger-related protein Shew185_2085 2492794 - 2493129 + | hypothetical protein Shew185_2086 2493129 - 2493425 + | hypothetical protein Shew185_2087 2493428 - 2493997 + | hypothetical protein Shew185_2088 2494142 - 2495782 + | prophage MuSo1, portal protein, putative Shew185_2089 2495782 - 2497368 + | hypothetical protein Shew185_2090 2497361 - 2498674 + | SPP1 family phage head morphogenesis protein Shew185_2091 2498679 - 2499131 + | phage virion morphogenesis protein Shew185_2092 2500054 - 2499173 - | hypothetical protein Shew185_2093 2500354 - 2501445 + | hypothetical protein Shew185_2094 2501446 - 2501874 + | hypothetical protein Shew185_2095 2501876 - 2502583 + | hypothetical protein TERM 2864 2502672 - 2502647 - f 80 -11.3 -2.84812 | gap 1, opp_overlap 2502647 AGCGAGATCATTATA GGCACTC-CAAT GTA ATTGAGAGTGCC TTTTTTATGCCTGCA TERM 2865 2502647 - 2502672 + F 100 -11.3 -5.28176 | gap 1, opp_overlap 2502647 AGCGAGATCATTATA GGCACTC-CAAT GTA ATTGAGAGTGCC TTTTTTATGCCTGCA Shew185_2096 2502679 - 2503806 + | prophage MuSo1, protein Gp32, putative Shew185_2097 2503861 - 2505020 + | transposase IS3/IS911 family protein Shew185_2098 2505074 - 2505994 + | prophage MuSo1, major head subunit, putative Shew185_2099 2506077 - 2506616 + | Rho termination factor domain-containing protein Shew185_2100 2506619 - 2507074 + | hypothetical protein TERM 2866 2507454 - 2507491 + G 70 -9.9 -3.11289 | opp_overlap 2507462, overlap 2507451 CGTTAAACCCCGTTT CACTAAAAGCCACGG TTATTACC CCGTGGCGTTAAGTG TGATTTTGAGATTCA TERM 2867 2507483 - 2507462 - g 77 -8.7 -4.25104 | opp_overlap 2507454 2507451 CCCGTTTCACTAAAA GCCACGG TTATTACC CCGTGGC GTTAAGTGTGATTTT Shew185_2101 2507074 - 2507514 + | hypothetical protein Shew185_2102 2507535 - 2508281 + | hypothetical protein TERM 2868 2510169 - 2510143 - g 80 -8.6 -4.35524 | opp_overlap 2510142 2510143 CTGGCAAACTTAAAA CCGCCTTGGCAG CAG CGGCTAAAGCGG GTTTGTACTTAGCCC TERM 2869 2510279 - 2510256 - g 80 -7.4 -4.64598 | overlap 2510257 2510263 GAAGCACTGGAAAAA TCTAAACGCG CTGC CGCGTCTAGC GCCAAACAGTTGGAG TERM 2870 2510278 - 2510257 - g 78 -10.9 -3.38036 | overlap 2510256 2510263 AAGCACTGGAAAAAT CTAAACGCG CTGC CGCGTCTAG CGCCAAACAGTTGGA TERM 2871 2510785 - 2510775 - g 73 -8.2 -3.93038 | opp_overlap 2510774 2510775 CAGGTGAATACGAAA GCCG AAG CGGC CTTTAATCTGATTAA TERM 2872 2510820 - 2510804 - g 71 -4.4 -4.74801 | TAATCTGATTAAAAA CAACCG TGAAC CGATTG AGCAACAAAAGGATG TERM 2873 2510886 - 2510866 - g 73 -10.3 -3.17714 | overlap 2510856 2510881 CTAAAGCGGCATTAA CGGCCGCCG AAG CGACGGGCG CAGCGGTACCCGAAA TERM 2874 2511560 - 2511540 - g 75 -5.3 -4.69664 | overlap 2511541 GATAGCACCGAAAAA CTCAACGCC CGC GTCGATGAG CTGACTAAAAGCATC TERM 2875 2511754 - 2511739 - g 70 -7.6 -3.90291 | ATCGTGTCAATCAAA TTAGCC GCGA GGCTAA GTGGAATATACGCGA Shew185_2103 2508393 - 2512316 + | phage tape measure protein Shew185_2104 2512313 - 2512678 + | hypothetical protein TERM 2876 2513235 - 2513221 - g 91 -11.4 -4.18018 | TCCTGGTATTGAAAA CGTGGC ATG GCCACG CAAAACCCATTTCGG TERM 2877 2515072 - 2515052 - g 76 -11.1 -3.14132 | opp_overlap 2515054 GGCGGTTGGCAGCAA GGCGAAGCG ATT CGTTTCGCC ACGTTCGCGGCCTCA Shew185_2105 2512706 - 2515180 + | hypothetical protein Shew185_2106 2515192 - 2516196 + | hypothetical protein Shew185_2107 2516189 - 2516488 + | hypothetical protein Shew185_2108 2516493 - 2516825 + | hypothetical protein Shew185_2109 2516822 - 2517730 + | hypothetical protein TERM 2878 2518113 - 2518142 + G 87 -6.5 -5.15969 | gap 1, overlap 2518112 2518139 CGCAGTCAATCACAT GCTG-CCTATGCAG TGT TTGCATGGGATAGC TTTTTTAGCTTAAAA Shew185_2110 2517723 - 2519699 + | hypothetical protein Shew185_2111 2519696 - 2519917 + | hypothetical protein TERM 2879 2519965 - 2519923 - f 88 -8.4 -4.70772 | overlap 2519925 2519928 AGAGATTTAATAAAA GAGAGCGGTCTAGCAATGCT ACC AACACTGCTAGACCGTCAAC ACACAGGATTAGACC TERM 2880 2519962 - 2519925 - f 100 -15.1 -3.96156 | gap 1, overlap 2519923 2519928 AGATTTAATAAAAGA GAGCGGTCTAGCAATGCT ACC AACACTGCTAGACCG-TC AACACACAGGATTAG TERM 2881 2519960 - 2519928 - f 100 -17.9 -2.72434 | overlap 2519925 2519923 TTTAATAAAAGAGAG CGGTCTAGCAATGCT ACC AACACTGCTAGACCG TCAACACACAGGATT TERM 2882 2519985 - 2519967 - f 72 -9.6 -3.05343 | overlap 2519969 2519971 GCTAGACCGTCAACA CACAGGAT TAG ACCCTGTG AGCCAACCAAGGCTC TERM 2883 2520055 - 2520043 - f 76 -3.4 -5.31275 | GCCTAGCATAAAAAA TCCT AAAAA AGGA GGCTCACATGCCAAA Shew185_2112 2520063 - 2520824 + | DNA adenine methylase TERM 2884 2520859 - 2520876 + F 77 -6.2 -4.60924 | opp_overlap 2520852 2520859 AGAAAAGACTCAATA GCTCCC GTTTTA GGGGGC TTTTTGAGAAGTTTA TERM 2885 2520937 - 2520921 - f 79 -9.5 -3.78022 | CCCATATTTATCAAA CTAAGTG AAG CACTTAG TAATAAATCAATCAC Shew185_2113 2521522 - 2523528 + | excinuclease ABC subunit B TERM 2886 2523583 - 2523557 - T 100 -13.1 -5.32699 | gap 1, opp_overlap 2523557 CTAAAGATTAAAAAA GCCGTC-CAGCA ATTA TGCTGCGACGGC TTTTTTATGTCTGTC TERM 2887 2523557 - 2523583 + T 100 -13.1 -5.4492 | gap 1, opp_overlap 2523557 CTAAAGATTAAAAAA GCCGTC-CAGCA ATTA TGCTGCGACGGC TTTTTTATGTCTGTC Shew185_2114 2524201 - 2523605 - | rhomboid family protein Shew185_2115 2524920 - 2524198 - | queuosine biosynthesis protein QueC Shew185_2116 2525092 - 2525760 + | radical activating enzyme TERM 2888 2525823 - 2525783 - T 70 -9.2 -3.16564 | gap 1, opp_overlap 2525794, overlap 2525794 GGGTTACTCTACCAA CGATAAAAAAACGCCTCAC AACA GTGGGGCG-TTTTTTATGG CTGACGTTTAGCGGT TERM 2889 2525794 - 2525813 + T 100 -11.4 -5.28176 | opp_overlap 2525794 2525783 CCAACGATAAAAAAA CGCCTCAC AACA GTGGGGCG TTTTTTATGGCTGAC TERM 2890 2525813 - 2525794 - T 100 -9.2 -5.71983 | opp_overlap 2525794, overlap 2525783 CCAACGATAAAAAAA CGCCTCAC AACA GTGGGGCG TTTTTTATGGCTGAC Shew185_2117 2527025 - 2525880 - | pyridoxal-5'-phosphate-dependent protein beta subunit TERM 2891 2526095 - 2526109 + g 71 -7 -4.08216 | CGTACAGGTTAGTGC CCGTCG ATG CGCCGG TTTTACGGCCAATCA TERM 2892 2526333 - 2526297 - G 83 -2.2 -5.56112 | opp_overlap 2526326, overlap 2526299 2526326 ATAAAAATCAAAAAA TACCGAGTTTTGCGGA TCAAC TACGCAAAGCTGGGTC GCCAACCTTTGATAG Shew185_2118 2527236 - 2527379 + | hypothetical protein TERM 2893 2527702 - 2527682 - f 70 -8.4 -3.37091 | opp_overlap 2527682 ACTTTTAAAACTCAA CCAAACAT TGGCC ATGTTTGG TACTTGAAAATGATT TERM 2894 2528205 - 2528172 - g 83 -8.2 -4.52589 | gap 2, opp_overlap 2528179, overlap 2528179 CGCGGCGATAGAAAA CGACAG-A-CGGGGCG AATT CGCCCTGTTGCTGTCG TTACTGTCGGTTGAC TERM 2895 2528179 - 2528196 + G 75 -10.5 -3.33361 | opp_overlap 2528172 2528179 ATAGAAAACGACAGA CGGGGCG AATT CGCCCTG TTGCTGTCGTTACTG Shew185_2119 2528104 - 2528592 + | hypothetical protein Shew185_2120 2528801 - 2529088 + | hypothetical protein TERM 2896 2530617 - 2530628 + G 75 -5.8 -4.5123 | overlap 2530613 TGTGGTTGATATCGC CTCG GTGG CGAG TTTGTTTGCTCCGTT Shew185_2121 2529340 - 2531523 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Shew185_2122 2532294 - 2531767 - | SecC motif-containing protein TERM 2897 2532254 - 2532274 + g 83 -7.5 -4.73635 | overlap 2532255 CAATCTTGATAGCGT TTGCCACTG CCA CAGGGGCAG TTTTGTTCAGTTGTA Shew185_2123 2532998 - 2532423 - | hypothetical protein Shew185_2124 2533117 - 2533707 + | Smr protein/MutS2 TERM 2898 2533759 - 2533787 + T 91 -9.7 -4.6468 | opp_overlap 2533764, overlap 2533764 ATAACAAGCAGGAAT AAAAATGCCCAAT CTC GTTGGGCATTTTG TTTTATGTAATTTGG TERM 2899 2533764 - 2533782 + T 100 -9.6 -5.23292 | opp_overlap 2533764, overlap 2533759 AAGCAGGAATAAAAA TGCCCAAT CTC GTTGGGCA TTTTGTTTTATGTAA TERM 2900 2533782 - 2533764 - T 90 -8.9 -5.16071 | opp_overlap 2533759 2533764 AAGCAGGAATAAAAA TGCCCAA TCTCG TTGGGCA TTTTGTTTTATGTAA Shew185_2125 2535686 - 2533821 - | peptidyl-dipeptidase A TERM 2901 2535972 - 2535958 - g 74 -4.2 -4.83615 | opp_overlap 2535957, overlap 2535960 GATGCCGCAGAAAAA CTGTTC GCC GAACGG GGCTTTTCTGAGACC Shew185_2126 2535907 - 2536545 + | TetR family transcriptional regulator Shew185_2127 2536562 - 2538841 + | acyl-CoA dehydrogenase TERM 2902 2539027 - 2539067 + T 100 -11.3 -5.24129 | opp_overlap 2539039, overlap 2539039 TTACAGAGAACTGCA GCTATAAAAAAACCACCTT CAT GAGGTGGTTTTTTATTGGC TTTTTTCTAACGCGC TERM 2903 2539039 - 2539055 + T 95 -8.7 -5.52096 | opp_overlap 2539039, overlap 2539027 GCAGCTATAAAAAAA CCACCTT CAT GAGGTGG TTTTTTATTGGCTTT TERM 2904 2539055 - 2539039 - T 100 -8 -5.64274 | opp_overlap 2539039 2539027 GCAGCTATAAAAAAA CCACCT TCATG AGGTGG TTTTTTATTGGCTTT Shew185_2128 2540550 - 2539111 - | pyruvate kinase TERM 2905 2540716 - 2540689 - R 79 -8.6 -3.96624 | gap 1, opp_overlap 2540689 TATTTGCACGATAAA TGGCTAG-GTTAA GGA TCAACACTAGCCA TTTTTAGAAAAGGAA TERM 2906 2540689 - 2540716 + r 77 -6.4 -4.56597 | gap 1, opp_overlap 2540689 TATTTGCACGATAAA TGGCTAG-GTTAA GGA TCAACACTAGCCA TTTTTAGAAAAGGAA Shew185_2129 2541591 - 2540737 - | DNA-binding transcriptional regulator HexR Shew185_2130 2541904 - 2543376 + | glucose-6-phosphate 1-dehydrogenase TERM 2907 2543472 - 2543437 - g 75 -10.4 -3.30159 | overlap 2543439 2543443 CCAAGTGCGTTAGAA CAGCAACTGGCCAGCA AGAT TGCAAGCCAGTTACAG GAAGCCGTCGATGCC TERM 2908 2543470 - 2543439 - g 79 -11.6 -3.21772 | overlap 2543437 2543443 AAGTGCGTTAGAACA GCAACTGGCCAGCA AGAT TGCAAGCCAGTTAC AGGAAGCCGTCGATG TERM 2909 2543928 - 2543912 - g 70 -7.9 -3.80733 | opp_overlap 2543911 2543912 CCCACGGCAGAATAA CGCTCTC TAA GAGTGCG ATTCTGAACAGCAGA Shew185_2131 2543386 - 2544084 + | 6-phosphogluconolactonase Shew185_2132 2544094 - 2545920 + | phosphogluconate dehydratase Shew185_2133 2545941 - 2546582 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2910 2546605 - 2546632 + T 79 -10 -3.5913 | opp_overlap 2546612, overlap 2546612 TTGAAATAGCTACAA AAAAAAACCACC GCAA GGTGGTTTTTTA TCTTTCATCTTTAGC TERM 2911 2546612 - 2546625 + T 100 -8.1 -5.5762 | opp_overlap 2546612, overlap 2546605 AGCTACAAAAAAAAA CCACC GCAA GGTGG TTTTTTATCTTTCAT TERM 2912 2546625 - 2546612 - T 100 -8.1 -6.24157 | opp_overlap 2546612 2546605 AGCTACAAAAAAAAA CCACC GCAA GGTGG TTTTTTATCTTTCAT Shew185_2134 2548115 - 2546766 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein Shew185_2135 2548728 - 2548141 - | hypothetical protein TERM 2913 2548988 - 2548964 - R 91 -9.4 -4.64657 | opp_overlap 2548968, overlap 2548954 2548968 CGAAATCGCTAAAAA TAAAGCGACC ACTAG GATCGCTTTA TGACTCAAACCGTTA TERM 2914 2548984 - 2548968 - R 79 -5.8 -4.86385 | opp_overlap 2548968, overlap 2548954 2548964 ATCGCTAAAAATAAA GCGACC ACTAG GATCGC TTTATGACTCAAACC Shew185_2136 2550231 - 2549017 - | aminotransferase AlaT TERM 2915 2550970 - 2550984 + H 74 -6.4 -4.41348 | overlap 2550972 TTATTCTAAAACCAT TTGCCT TTT AGGCGA TTTATTTAGAGGACC Shew185_2137 2551007 - 2552389 + | Na+/H+ antiporter NhaC TERM 2916 2552443 - 2552430 - f 82 -8.1 -4.51812 | opp_overlap 2552430 2552437 TGTTAGAATAAGAAA CCAGC TGCG GCTGG TTTTTTTATATCTGC TERM 2917 2552430 - 2552443 + F 100 -8.1 -5.76633 | opp_overlap 2552430, overlap 2552437 TGTTAGAATAAGAAA CCAGC TGCG GCTGG TTTTTTTATATCTGC Shew185_2138 2552701 - 2554035 + | glutamate--putrescine ligase TERM 2918 2554176 - 2554133 - T 100 -14 -5.15634 | opp_overlap 2554146, overlap 2554146 CACGCGACTAAAAAA CAGCAACAAAAAAGCCAGTG CAAG CACTGGCTTTTCTTCGGCTG GAAACGAGAAGGGCG TERM 2919 2554163 - 2554146 - T 100 -11.3 -5.54885 | opp_overlap 2554146, overlap 2554133 AACAGCAACAAAAAA GCCAGTG CAAG CACTGGC TTTTCTTCGGCTGGA TERM 2920 2554146 - 2554163 + T 93 -11.3 -4.65916 | opp_overlap 2554133 2554146 AACAGCAACAAAAAA GCCAGTG CAAG CACTGGC TTTTCTTCGGCTGGA Shew185_2139 2554753 - 2554193 - | elongation factor P Shew185_2140 2555977 - 2554799 - | hypothetical protein TERM 2921 2556041 - 2556026 - R 100 -7.5 -5.73339 | opp_overlap 2556026 ATAAGCATAAAAAAA GCGGC GTTAAG GCCGC TTTAATCGAATGGTT Shew185_2141 2556591 - 2556064 - | flavodoxin FldA Shew185_2142 2556918 - 2556646 - | LexA regulated protein Shew185_2143 2557150 - 2556929 - | hypothetical protein TERM 2922 2556997 - 2556983 - G 80 -9.2 -4.30987 | ACCTTTTACAATAAA CCCGGC GCA GCCGAG AAATAACACTAACCA Shew185_2144 2558028 - 2557252 - | alpha/beta hydrolase fold TERM 2923 2557764 - 2557817 + g 72 -11.1 -2.50113 | gap 1, overlap 2557753 2557758 2557763 2557775 CTAACGCCGTCGCCA TGGCGATTTTAC-CGCCCATGGAGTG ACC CACTATATGGGCGCGTTCAATAGCCA GTTCGTCGAGTAATG TERM 2924 2557775 - 2557806 + g 72 -10.2 -3.06133 | gap 1, overlap 2557764 2557763 GCCATGGCGATTTTA C-CGCCCATGGAGTG ACC CACTATATGGGCGCG TTCAATAGCCAGTTC Shew185_2145 2558326 - 2558868 + | replication initiation regulator SeqA Shew185_2146 2558951 - 2560603 + | phosphoglucomutase TERM 2925 2560661 - 2560634 - T 100 -17.2 -4.85267 | opp_overlap 2560634 2560638, overlap 2560638 ATAAAGTATTAAAAA CAAACGCACTCA GTTT TGAGTGCGTTTG TTTGTGTCTATTTAA TERM 2926 2560634 - 2560661 + T 100 -17.2 -4.24623 | opp_overlap 2560634 2560638, overlap 2560638 ATAAAGTATTAAAAA CAAACGCACTCA GTTT TGAGTGCGTTTG TTTGTGTCTATTTAA TERM 2927 2560657 - 2560638 - T 100 -12.2 -4.92756 | opp_overlap 2560634 2560638, overlap 2560634 AGTATTAAAAACAAA CGCACTCA GTTT TGAGTGCG TTTGTTTGTGTCTAT TERM 2928 2560638 - 2560657 + T 100 -12.2 -4.66625 | opp_overlap 2560638 2560634, overlap 2560634 AGTATTAAAAACAAA CGCACTCA GTTT TGAGTGCG TTTGTTTGTGTCTAT Shew185_2147 2561192 - 2560713 - | peptide methionine sulfoxide reductase Shew185_2148 2561535 - 2562569 + | succinylglutamate desuccinylase TERM 2929 2562710 - 2562685 - f 74 -9.1 -3.53174 | overlap 2562683 2562687 ATATTCGTATAAACA GACGCATCAAA ACGC TTTGATGCGTA ATGAGATAACAAGAG TERM 2930 2562708 - 2562687 - f 86 -11.7 -3.33798 | overlap 2562685 2562683 ATTCGTATAAACAGA CGCATCAAA ACGC TTTGATGCG TAATGAGATAACAAG Shew185_2149 2562732 - 2563910 + | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) TERM 2931 2564590 - 2564574 - g 71 -5 -4.60924 | GAAATCCTTGAAAAA GCCGCC GACAT GGCCGC TAAAGAAGGGATCTC TERM 2932 2564852 - 2564832 - g 73 -4.8 -4.7497 | CTCATTCATGAAAAA GAATACAT GCCAG ATGCATTC AAAACGTTTGAAGCC Shew185_2150 2563914 - 2564891 + | transketolase central region Shew185_2151 2564901 - 2566526 + | dihydrolipoamide acetyltransferase TERM 2933 2566556 - 2566573 + F 100 -11.3 -5.74086 | opp_overlap 2566556 GATTTGACAGTAAAA GGACGCT TTAG AGCGTCC TTTTTTATTTGCTTT TERM 2934 2566573 - 2566556 - f 93 -11.3 -4.35116 | opp_overlap 2566556 GATTTGACAGTAAAA GGACGCT TTAG AGCGTCC TTTTTTATTTGCTTT Shew185_2152 2566660 - 2567727 + | quinolinate synthetase TERM 2935 2567763 - 2567782 + T 90 -7.1 -5.28176 | opp_overlap 2567763 TCCGTTTGATAAAAA TCCCCGC CATAGA GTGGGGA TTTTTTATGGCTGGA TERM 2936 2567782 - 2567763 - T 75 -5.6 -4.82901 | opp_overlap 2567763 TCCGTTTGATAAAAA TCCCCGCC ATAG AGTGGGGA TTTTTTATGGCTGGA TERM 2937 2567815 - 2567832 + T 70 -8.3 -3.37344 | opp_overlap 2567815 TTAAGGCAATATAAA GCCCCGC AAAT GCGAGGC TTGATTGAGTAACGC TERM 2938 2567832 - 2567815 - T 89 -10.5 -4.23794 | opp_overlap 2567815 TTAAGGCAATATAAA GCCCCGC AAAT GCGAGGC TTGATTGAGTAACGC Shew185_2153 2568875 - 2567865 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 2939 2569070 - 2569050 - R 93 -12.7 -3.81575 | opp_overlap 2569049 2569048 2569052 GGTAAAAAATTACAA GATGGCAAA CAT TTTGCCATC GATTGCTTAGTCTGT TERM 2940 2569052 - 2569068 + r 70 -9.5 -2.61484 | opp_overlap 2569050, overlap 2569049 2569048 TAAAAAATTACAAGA TGGCAAA CAT TTTGCCA TCGATTGCTTAGTCT Shew185_2154 2569976 - 2569077 - | hypothetical protein TERM 2941 2570098 - 2570081 - H 73 -8.5 -3.73042 | overlap 2570079 GCGCCGACCAAAACA GGGTTTT CCCT AAAACCC GCATTAGATTATTGG Shew185_2155 2570180 - 2571613 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2942 2571666 - 2571644 - f 83 -12.8 -2.54193 | overlap 2571631 2571628 CATCAGCGTAAGTTA TGCGGAGTCT TCA AGACTCCACA TAACCGTCACATAAA TERM 2943 2571682 - 2571697 + F 100 -11.8 -5.38839 | opp_overlap 2571628 2571682 TAACCGTCACATAAA GCGCCC AGTA GGGCGC TTTTGTTTTTCTATA TERM 2944 2571697 - 2571682 - f 91 -11.8 -4.0492 | opp_overlap 2571682, overlap 2571628 TAACCGTCACATAAA GCGCCC AGTA GGGCGC TTTTGTTTTTCTATA TERM 2945 2572253 - 2572233 - f 73 -10.5 -2.89742 | overlap 2572236 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGGTAACAGCGTGC TERM 2946 2572250 - 2572236 - f 72 -8.6 -3.5947 | overlap 2572233 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGGTAACAGCG TERM 2947 2572299 - 2572334 + F 100 -15.6 -3.91144 | opp_overlap 2572300, overlap 2572300 2572307 CTCGGGTACCAAAAA ACAGAAAAGCCCTGAC TCAT GTCAGGGCTTTTTTGC TTTATCGCATCTCAA TERM 2948 2572333 - 2572300 - f 100 -16.9 -5.14563 | opp_overlap 2572299 2572300 2572307 TCGGGTACCAAAAAA CAGAAAAGCCCTGAC TCAT GTCAGGGCTTTTTTG CTTTATCGCATCTCA TERM 2949 2572300 - 2572333 + F 100 -19.1 -2.94365 | opp_overlap 2572300, overlap 2572299 2572307 TCGGGTACCAAAAAA CAGAAAAGCCCTGAC TCAT GTCAGGGCTTTTTTG CTTTATCGCATCTCA TERM 2950 2572307 - 2572326 + F 100 -13.6 -5.42514 | opp_overlap 2572300, overlap 2572300 2572299 CCAAAAAACAGAAAA GCCCTGAC TCAT GTCAGGGC TTTTTTGCTTTATCG Shew185_2156 2572711 - 2573904 + | aromatic amino acid aminotransferase TERM 2951 2573957 - 2573986 + T 100 -18.1 -5.24796 | opp_overlap 2573957 2573963 TCTTTAGCCTTCAAA CATAAAGGACAGC ATTT GCTGTCCTTTATG TTTTTATTGTGTCAG TERM 2952 2573986 - 2573957 - T 100 -18.1 -3.55444 | opp_overlap 2573957, overlap 2573963 TCTTTAGCCTTCAAA CATAAAGGACAGC ATTT GCTGTCCTTTATG TTTTTATTGTGTCAG TERM 2953 2573980 - 2573963 - T 93 -11.3 -4.32857 | opp_overlap 2573957, overlap 2573957 GCCTTCAAACATAAA GGACAGC ATTT GCTGTCC TTTATGTTTTTATTG Shew185_2157 2574961 - 2574023 - | protein of unknown function UPF0052 and CofD Shew185_2158 2575540 - 2576352 + | bax protein, putative TERM 2954 2576413 - 2576427 + G 71 -2.8 -4.92783 | TGCTGAAACTGTATC CCTTGA ATA TAAAGG TTTTTATGATAGGTT Shew185_2159 2576345 - 2576968 + | hypothetical protein TERM 2955 2577064 - 2577094 + T 95 -13.5 -3.75295 | opp_overlap 2577070, overlap 2577070 CTTATTTCGTAGCCA TAAAAATGCCCAC TTAAT GTGGGCATTTTTG TTTAGCTAATTTATC TERM 2956 2577088 - 2577070 - T 93 -10.3 -4.87665 | opp_overlap 2577070 2577064 TCGTAGCCATAAAAA TGCCCAC TTAAT GTGGGCA TTTTTGTTTAGCTAA TERM 2957 2577070 - 2577088 + T 100 -10.3 -5.30616 | opp_overlap 2577070, overlap 2577064 TCGTAGCCATAAAAA TGCCCAC TTAAT GTGGGCA TTTTTGTTTAGCTAA Shew185_2160 2578137 - 2577169 - | PP-loop domain-containing protein TERM 2958 2578143 - 2578171 + r 70 -8.7 -3.40052 | opp_overlap 2578144, overlap 2578141 2578144 CTTCAAGCATAAAAA AGCGCCCAGTAAC TCA GTTTCAGGGCGCG TATTATTCCAGCTAT TERM 2959 2578144 - 2578170 + r 81 -12.2 -2.63549 | opp_overlap 2578144, overlap 2578143 2578141 TTCAAGCATAAAAAA GCGCCCAGTAAC TCA GTTTCAGGGCGC GTATTATTCCAGCTA TERM 2960 2578170 - 2578144 - R 100 -12.2 -5.37345 | opp_overlap 2578143 2578141 2578144 TTCAAGCATAAAAAA GCGCCCAGTAAC TCA GTTTCAGGGCGC GTATTATTCCAGCTA Shew185_2161 2579148 - 2578216 - | universal stress protein UspE Shew185_2162 2580159 - 2579407 - | fumarate/nitrate reduction transcriptional regulator TERM 2961 2579976 - 2580009 + g 74 -2.6 -5.05782 | ATTTTAACGCATCAC CCGATTTAAAAA TTTGCTCGCC TTTTTGGATCGG TTTTTTACGCTCAAT Shew185_2163 2580907 - 2580215 - | hypothetical protein TERM 2962 2580861 - 2580831 - G 71 -8.3 -3.73968 | gap 1, overlap 2580832 2580852 AAAGCGCCCACTAAA CCGCCACACA-TGC CAAA GCAATGTGCGGCGC CCATGAGACCTACCA TERM 2963 2580860 - 2580832 - G 76 -11.8 -2.83899 | gap 1, overlap 2580831 2580852 AAGCGCCCACTAAAC CGCCACACA-TGC CAAA GCAATGTGCGGCG CCCATGAGACCTACC Shew185_2164 2581119 - 2580904 - | cytochrome oxidase maturation protein, cbb3-type Shew185_2165 2583557 - 2581158 - | heavy metal translocating P-type ATPase TERM 2964 2581235 - 2581210 - G 71 -7.5 -4.12899 | overlap 2581211 ACCACAATCAAAGAA CTCGCCGACAT GCCA ATGGCGGCGAT ATAAGGTGCCACATG TERM 2965 2581234 - 2581211 - G 74 -11 -3.06655 | overlap 2581210 CCACAATCAAAGAAC TCGCCGACAT GCCA ATGGCGGCGA TATAAGGTGCCACAT TERM 2966 2582135 - 2582116 - G 73 -7.8 -3.98658 | AGGCGAGTAAAAATA GCTGTCGC GCAG GTGACAGC GGTCGGTGTGGCAAG TERM 2967 2582797 - 2582770 - G 76 -8.4 -4.08767 | overlap 2582773 TTTACTGTGGCAAAA CAACTGGCAACG TATG CGCCGCCAATCG CAATGGAGACAGACA TERM 2968 2582794 - 2582773 - G 71 -6.5 -4.17316 | overlap 2582770 ACTGTGGCAAAACAA CTGGCAACG TATG CGCCGCCAA TCGCAATGGAGACAG TERM 2969 2583510 - 2583525 + g 72 -10.4 -3.04144 | opp_overlap 2583505 AGTCACAAACTGCTG GCCCGT CAGC ACGGGC TCTTGGCAGTGAAAA Shew185_2166 2584073 - 2583594 - | hypothetical protein TERM 2970 2584163 - 2584143 - R 100 -15.5 -5.78622 | opp_overlap 2584138 2584137 GCACTTTAAAAAAAA GGCCTCGAA GTC TTCGAGGCC TTAGCATTACTCACA Shew185_2167 2585152 - 2584184 - | cytochrome c oxidase, cbb3-type, subunit III Shew185_2168 2585328 - 2585152 - | Cbb3-type cytochrome oxidase component Shew185_2169 2585966 - 2585340 - | cytochrome c oxidase, cbb3-type, subunit II Shew185_2170 2587416 - 2585980 - | cytochrome c oxidase, cbb3-type, subunit I TERM 2971 2587513 - 2587487 - H 83 -7.2 -4.6709 | TAAAATGACATAAAA CTCAGCTTCCCT ATT AAGGTTGCTGAG CTATGTCAATGCGTT Shew185_2171 2587642 - 2588127 + | hypothetical protein Shew185_2172 2589769 - 2588198 - | response regulator receiver modulated metal dependent phosphohydrolase Shew185_2173 2589949 - 2590143 + | hypothetical protein TERM 2972 2590154 - 2590177 + F 83 -9.7 -3.86311 | TCTGACCCTAGTTGA TGCCGATAA ATAACG TTATCGGCA TTTGCGTTTAAGTAT Shew185_2174 2590228 - 2591523 + | phage integrase family protein TERM 2973 2591823 - 2591774 - T 100 -19.5 -3.53224 | overlap 2591819 CAGTCTGCCGCGAAA TCTCATTCTGAGTGGTCACGAAC ACAT GTTCGTGGTCACGCAGAATGAGA ATCTCAGGCAGCCGT Shew185_2175 2593647 - 2592397 - | hypothetical protein TERM 2974 2592482 - 2592465 - G 74 -9.1 -3.63968 | overlap 2592458 2592457 CTTCAAATTGGCAAA GTGCCAG ACTG CCGGCAC GCGCGACGCGAGGAG TERM 2975 2593213 - 2593230 + g 71 -4.8 -4.62069 | opp_overlap 2593201, overlap 2593200 2593196 ATAGGCGTTCGGTTT GAGCGC CATGAT GTGCTC TTTTTCCAATACCAG Shew185_2176 2594687 - 2593737 - | hypothetical protein TERM 2976 2594297 - 2594279 - G 71 -3.8 -4.77036 | opp_overlap 2594265 GTTTAGCAGGAAAAA CCTGTTGA ATT TCATCAAG AATAATGAGCTCGAC Shew185_2177 2596696 - 2594681 - | integrase catalytic region Shew185_2178 2597316 - 2596696 - | hypothetical protein TERM 2977 2598425 - 2598435 + H 70 -5.4 -4.3534 | overlap 2598416 AACAAACGGACTTTC TGTC TTA GACA TTTTCATCATTACAC TERM 2978 2598741 - 2598717 - g 75 -5.2 -4.77757 | gap 1, opp_overlap 2598717 2598721, overlap 2598721 GTCTAAAAATGAAAA TGAAGAACTTT CTAG AAAGTTC-TCA TTTCTGTTGAAGTAC Shew185_2179 2598682 - 2599272 + | hypothetical protein Shew185_2180 2600636 - 2599332 - | RNA-directed DNA polymerase (Reverse transcriptase) TERM 2979 2599929 - 2599949 + g 76 -8.9 -3.89524 | opp_overlap 2599909 2599929 2599930, overlap 2599930 TACCAAAATGATAAA GTCGTCCGC GTA GCGGGCGAA TTTGTGCCCTCGGCT TERM 2980 2599949 - 2599929 - G 71 -6.7 -4.22407 | opp_overlap 2599929 2599930, overlap 2599909 2599930 TACCAAAATGATAAA GTCGTCCGC GTA GCGGGCGAA TTTGTGCCCTCGGCT TERM 2981 2599930 - 2599948 + g 81 -12.4 -2.93393 | opp_overlap 2599909 2599929 2599930, overlap 2599929 ACCAAAATGATAAAG TCGTCCGC GTA GCGGGCGA ATTTGTGCCCTCGGC TERM 2982 2599948 - 2599930 - G 73 -10.2 -3.12359 | opp_overlap 2599930 2599929, overlap 2599909 2599929 ACCAAAATGATAAAG TCGTCCGC GTA GCGGGCGA ATTTGTGCCCTCGGC TERM 2983 2600923 - 2600907 - H 75 -5.7 -4.72986 | opp_overlap 2600919, overlap 2600908 CATCGCCATCAAAAA CGCGCCC TTT GAGCGCT CGACTCGCAACAAGT TERM 2984 2600922 - 2600908 - H 72 -9.2 -3.4331 | opp_overlap 2600919, overlap 2600907 ATCGCCATCAAAAAC GCGCCC TTT GAGCGC TCGACTCGCAACAAG TERM 2985 2601079 - 2601097 + G 80 -7.5 -4.62872 | opp_overlap 2601079 GAAGATTCCGCACAA CACTTCA GAAGA TGAAGTG TTTTTGAAGCTTGGT Shew185_2181 2600990 - 2601946 + | hypothetical protein TERM 2986 2602095 - 2602117 + F 77 -4.8 -4.88918 | opp_overlap 2602093 2602095 GGGTTCGGAGAAACA CCAGACAACA TTA TGATGTATGG TTTTGTTTCGCCTGA TERM 2987 2602198 - 2602213 + F 81 -11.8 -2.65279 | overlap 2602193 2602184 2602195 2602194 TGCCGGCAACCCGCT GCGCGG CTTT CCGCGC TGAATTTGGACGTTA TERM 2988 2602463 - 2602452 - g 95 -4.4 -5.77677 | opp_overlap 2602452 GAAAACAACAAAAAA TACC CGTT GGTA TTGTTAAATGACACA TERM 2989 2602650 - 2602635 - g 77 -4.6 -4.98531 | GCTCCAAATGAAAAA CGAGGG CATT CGCTCG AAGTTCAGAAGTATT Shew185_2182 2602263 - 2603126 + | putative esterase Shew185_2183 2603221 - 2603586 + | hypothetical protein TERM 2990 2603603 - 2603615 + F 80 -10.5 -3.64703 | opp_overlap 2603601 AAGTTGTAGCACATC GCCCC GTT GGGGC TTTGACTGGCGCCGC Shew185_2184 2603647 - 2604447 + | phenazine biosynthesis PhzC/PhzF protein TERM 2991 2604492 - 2604462 - T 72 -9.6 -3.04501 | overlap 2604452 ACTAACGCTTCAAGA GGGACTGTCAACGC GTG GCGTTTCCTGTCCC ATTGAGCCGCGGTGG Shew185_2185 2605023 - 2604595 - | hypothetical protein TERM 2992 2606044 - 2606074 + H 79 -8.4 -4.04319 | opp_overlap 2606044 2606072, overlap 2606071 GGAATTAATGTAAAT TGATGTGTTGGACA AAC TTTCTAGCACATCA TTTCTGAATTTGTAA TERM 2993 2606777 - 2606751 - H 72 -9.6 -3.09516 | opp_overlap 2606745 TTCGCTAGTAGTTAA CGTTTAATAACA GGA TGTTATTGAACG GTGACCTTCCTACAG TERM 2994 2606864 - 2606850 - H 73 -7 -4.29432 | overlap 2606851 CAAACGCCATCAAAA CGCCGC TTT GCGGCT CGACTCGCAACAAGT TERM 2995 2606863 - 2606851 - H 75 -10.5 -3.16936 | overlap 2606850 AAACGCCATCAAAAC GCCGC TTT GCGGC TCGACTCGCAACAAG Shew185_2188 2606943 - 2607182 + | hypothetical protein TERM 2996 2608093 - 2608103 + G 87 -6.8 -5.03314 | AGTAGCACGTGATGA TGGC TCA GCCA TTTTTTCAACCTACA Shew185_2189 2607563 - 2608516 + | hypothetical protein Shew185_2190 2608503 - 2609492 + | hypothetical protein Shew185_2191 2609537 - 2610571 + | transcriptional factor MdcH Shew185_2192 2610810 - 2611481 + | hypothetical protein TERM 2997 2611651 - 2611673 + F 73 -7 -4.15088 | opp_overlap 2611647 2611651 TGGTTTTAAAGCAAC TTGGCTGGTA TCT TACAAGCCGA TATTTTTGTACTTTT TERM 2998 2613219 - 2613208 - g 75 -3.6 -5.09204 | overlap 2613197 AGACGGCAATAAAAA CCGC CTGC GCAG CCAAGACATTCATAA TERM 2999 2614316 - 2614295 - g 73 -8 -4.05714 | ATCGTCAACGACAAA TGGCTCGC CACATT GCAAGCCA ACATCATTGCCGAGA Shew185_2193 2611940 - 2614483 + | type I restriction-modification system, M subunit TERM 3000 2614955 - 2614976 + G 73 -2.3 -5.14698 | CTGCACAGAAGCAGT TCAATATCA TCGA TGCTGTTGA TTTTCTTTTCCCTTT TERM 3001 2615099 - 2615086 - g 71 -4.5 -4.62085 | overlap 2615098 ATTGCCAAAAAACAA GCGAT AAAA ACCGC CACCATGCAGCAACT TERM 3002 2615222 - 2615209 - g 71 -4.5 -4.51196 | CGTAAAGGTACAAAA CCCAG CGAG CTAGG CGAAATTCCAGATGA Shew185_2194 2614480 - 2615763 + | restriction modification system DNA specificity subunit Shew185_2195 2615773 - 2617581 + | hypothetical protein TERM 3003 2618357 - 2618347 - g 71 -4 -4.66938 | ACTTTGAACACAAAA TTGA TTG TCAA TGGACTGATTTTTTT TERM 3004 2619385 - 2619364 - g 81 -8.1 -4.65895 | gap 1 CCGCTGAGTTAAAAA GCATTAC-CG ACT CGAGTAATGC GGATGGTTGGAGAGA Shew185_2196 2617578 - 2619812 + | hypothetical protein TERM 3005 2620814 - 2620831 + G 71 -4.9 -4.55697 | CAGATTGAAAAAGTC TTTATCG GTGT CGATGAA TTTATTTATCGCACT Shew185_2197 2619809 - 2623000 + | HsdR family type I site-specific deoxyribonuclease TERM 3006 2623097 - 2623086 - g 71 -3 -4.93316 | CAAGAATATTAAAAA CTTA CATT TAAG CGTATTACCACCGGA TERM 3007 2623220 - 2623200 - g 73 -4.8 -4.7254 | AGCCTGGATTAAAAA GCAACAAA GGGAT TTTGTTAC CCAACCAAGGCAATC Shew185_2198 2623000 - 2623743 + | hypothetical protein TERM 3008 2624171 - 2624193 + F 73 -2 -5.20333 | overlap 2624173 CGCAACAAGTTAGGG CCGTGTAT CCTCGAC ATACACAG TTTTTGTTGTCCATC TERM 3009 2624285 - 2624308 + F 79 -9.7 -3.62597 | overlap 2624285 ACAGTTTTACGCTAA TGCCGATAA CGTCAT TTATCGGCA TTCTTGGAGACTCAG TERM 3010 2625027 - 2625037 + F 76 -3.2 -5.25906 | GACTGCTTCGTGTTT CAGG CTT CTTG TTTTTATTCATTTAT TERM 3011 2625479 - 2625514 + F 78 -4.1 -5.23316 | gap 1, opp_overlap 2625502, overlap 2625482 TCACATGGATAATCG TA-AGCGGCTCAGATT GATTA AATCAAAGCCGCTTTA TTTTTTCATCTCATC TERM 3012 2625482 - 2625510 + F 86 -7.4 -5.10526 | opp_overlap 2625502, overlap 2625479 CATGGATAATCGTAA GCGGCTCAGATT GATTA AATCAAAGCCGC TTTATTTTTTCATCT TERM 3013 2625922 - 2625946 + G 71 -8.5 -3.64198 | overlap 2625923 2625926 TTATTGGGGAGTGTT GTGTTGGTGGC GCT GCCACCATCAG TTATGTATCTCACCA TERM 3014 2625923 - 2625945 + G 80 -12 -2.78197 | overlap 2625922 2625926 TATTGGGGAGTGTTG TGTTGGTGGC GCT GCCACCATCA GTTATGTATCTCACC TERM 3015 2625926 - 2625942 + G 78 -12.3 -2.65591 | overlap 2625923 2625922 TGGGGAGTGTTGTGT TGGTGGC GCT GCCACCA TCAGTTATGTATCTC TERM 3016 2625992 - 2626022 + G 79 -11.3 -3.54459 | gap 1 TTTATTCATGTTGGG GTCCCAAACTGCCA AAAA TGGT-GTTTGGGAC TTTAGGGACACTTGC Shew185_2199 2625628 - 2626386 + | hypothetical protein TERM 3017 2626422 - 2626400 - T 100 -15 -5.77988 | opp_overlap 2626403 AGATACATAAAAAAA GCAGTAACTG AAT CAGTTACTGC TTAGCGCCGAGCAAC TERM 3018 2626403 - 2626419 + T 70 -9.5 -2.70932 | opp_overlap 2626400 TACATAAAAAAAGCA GTAACTG AAT CAGTTAC TGCTTAGCGCCGAGC Shew185_2200 2626852 - 2626514 - | alpha-N-arabinofuranosidase Shew185_2202 2628754 - 2629317 + | hypothetical protein TERM 3019 2629413 - 2629380 - T 100 -22.7 -3.93216 | opp_overlap 2629384 2629387 GTTAAATGACAATAA CCAACAAGGCCATCA ATGC TGATGGCCTTGTTGG TAAACTATGATGGAG TERM 3020 2629384 - 2629409 + T 100 -16.3 -3.17941 | opp_overlap 2629380, overlap 2629387 AATGACAATAACCAA CAAGGCCATCA ATGC TGATGGCCTTG TTGGTAAACTATGAT TERM 3021 2629387 - 2629406 + T 89 -12.2 -3.73088 | opp_overlap 2629380, overlap 2629384 GACAATAACCAACAA GGCCATCA ATGC TGATGGCC TTGTTGGTAAACTAT TERM 3022 2629507 - 2629473 - T 100 -13.9 -4.30441 | gap 1, opp_overlap 2629481, overlap 2629481 CTAGAATAGCTAAAA TGCAAAAAGCCGCTAA TTGC TTAGCGGCTTTTTG-A CTGAATATGGCGGAG TERM 3023 2629500 - 2629481 - T 100 -12.2 -4.87318 | opp_overlap 2629481, overlap 2629473 GCTAAAATGCAAAAA GCCGCTAA TTGC TTAGCGGC TTTTTGACTGAATAT TERM 3024 2629481 - 2629500 + T 100 -12.2 -4.67755 | opp_overlap 2629473 2629481 GCTAAAATGCAAAAA GCCGCTAA TTGC TTAGCGGC TTTTTGACTGAATAT Shew185_2203 2630957 - 2629686 - | inner membrane transport protein YdhC Shew185_2204 2631073 - 2631975 + | putative DNA-binding transcriptional regulator Shew185_2205 2632393 - 2633052 + | hypothetical protein TERM 3025 2633090 - 2633109 + F 100 -12.2 -5.48213 | opp_overlap 2633090 TAACTTGCGTTAGAA TGGCCCTA CTTT TAGGGCCA TTTTTATTTTAAATG TERM 3026 2633109 - 2633090 - f 86 -12.2 -3.29461 | opp_overlap 2633090 TAACTTGCGTTAGAA TGGCCCTA CTTT TAGGGCCA TTTTTATTTTAAATG Shew185_2206 2633122 - 2633511 + | DsrE family protein Shew185_2207 2633526 - 2633882 + | DsrE family protein Shew185_2208 2633882 - 2634163 + | DsrH family protein Shew185_2209 2634157 - 2634495 + | DsrC family protein TERM 3027 2634585 - 2634609 + T 100 -12.9 -4.96773 | opp_overlap 2634585 TGGCACAAACAAAAA GGCATGTTCCC TTG GGAAACATGCC TTTCTTTTTACTTGA TERM 3028 2634609 - 2634585 - T 100 -15.1 -5.38054 | opp_overlap 2634585 TGGCACAAACAAAAA GGCATGTTCCC TTG GGAAACATGCC TTTCTTTTTACTTGA Shew185_2210 2634762 - 2634640 - | hypothetical protein Shew185_2211 2636068 - 2634782 - | seryl-tRNA synthetase TERM 3029 2634841 - 2634851 + g 74 -6.8 -4.43571 | CTGGGATTGTGATAC TGCC ATC GGCA TTTTGATAGTTTTCT TERM 3030 2636014 - 2636003 - G 75 -5.8 -4.65933 | overlap 2636004 2636007 TATGTCTAAAATAAA GCCA CGGG TGGC CAGTCGCTCAGCGGT TERM 3031 2636114 - 2636104 - R 76 -3.2 -5.28826 | AAATGCGAGAAAAAA CCAG TTG CTGA CCTAAGTACACCATG Shew185_2212 2636461 - 2636087 - | CrcB protein Shew185_2213 2637785 - 2636454 - | recombination factor protein RarA TERM 3032 2636570 - 2636556 - G 74 -2.8 -5.08255 | AGTTGGAAAATAAAA CTGC GCTGTTT GCAG GGATTCGGGGAAATA Shew185_2214 2638420 - 2637794 - | outer membrane lipoprotein carrier protein LolA TERM 3033 2638459 - 2638476 + r 70 -8.3 -3.32807 | opp_overlap 2638459 CTTGGGTGTATCAAA GCCACGC CTTA GCGCGGC TTAATAATGTTTTGG TERM 3034 2638476 - 2638459 - R 80 -10.5 -3.72576 | opp_overlap 2638459 CTTGGGTGTATCAAA GCCACGC CTTA GCGCGGC TTAATAATGTTTTGG Shew185_2215 2641230 - 2638477 - | cell divisionFtsK/SpoIIIE TERM 3035 2640082 - 2640093 + g 75 -5.8 -4.53303 | GGCTTGATTCACGGC GCCT GTTG AGGC TTTTGTATCAAAATC TERM 3036 2640381 - 2640392 + g 76 -2.2 -5.24129 | AAATTTTTGCAAGGG CCGA TAGC TTGG TTTTTTGTGGCGCAA TERM 3037 2641471 - 2641439 - R 93 -9.4 -4.90296 | gap 1, overlap 2641442 AAAATGCCACAAAAA TA-AGCCCCTAAGTT GGCG AACTTAAGGGCTATA ACAAGGTTAGTCGTC TERM 3038 2641467 - 2641442 - R 100 -12.7 -4.53475 | overlap 2641439 ATGCCACAAAAATAA GCCCCTAAGTT GGCG AACTTAAGGGC TATAACAAGGTTAGT TERM 3039 2641548 - 2641529 - R 95 -12.2 -4.25056 | opp_overlap 2641529 2641532 2641543 GACTTGACCAATAAA TAAGGGGC CTAA GCCCCTTA TTGTAAAACCAAACA TERM 3040 2641529 - 2641548 + r 86 -12.2 -3.28712 | opp_overlap 2641529, overlap 2641532 2641543 GACTTGACCAATAAA TAAGGGGC CTAA GCCCCTTA TTGTAAAACCAAACA TERM 3041 2641532 - 2641545 + r 79 -9.5 -3.78934 | opp_overlap 2641529, overlap 2641529 2641543 TTGACCAATAAATAA GGGGC CTAA GCCCC TTATTGTAAAACCAA Shew185_2216 2642081 - 2641575 - | leucine-responsive transcriptional regulator TERM 3042 2641952 - 2641972 + g 100 -11.9 -4.81083 | opp_overlap 2641950 2641951 CTCTTTCTAAACACG GAGTTGGAC TAA GTCCGACTC TTTTTGATAATTCCA TERM 3043 2642307 - 2642293 - g 77 -4.2 -5.04222 | opp_overlap 2642300, overlap 2642294 CAAGGAAATTAAAAA CCACGA ATA TCGTGT CGGTATGGTTCCTTC Shew185_2217 2642261 - 2643376 + | alanine dehydrogenase TERM 3044 2643441 - 2643465 + F 100 -14.3 -5.4505 | opp_overlap 2643441 2643442, overlap 2643442 AGCAAATGATCCAAA TCGGCCTCGAC TCT GTTGAGGCCGG TTTTTTATTGGCCAG TERM 3045 2643465 - 2643441 - f 79 -9.9 -3.74626 | opp_overlap 2643441 2643442, overlap 2643442 AGCAAATGATCCAAA TCGGCCTCGAC TCT GTTGAGGCCGG TTTTTTATTGGCCAG TERM 3046 2643442 - 2643464 + F 100 -15.6 -3.86307 | opp_overlap 2643441 2643442, overlap 2643441 GCAAATGATCCAAAT CGGCCTCGAC TCT GTTGAGGCCG GTTTTTTATTGGCCA TERM 3047 2643464 - 2643442 - f 90 -13.4 -2.84053 | opp_overlap 2643442 2643441, overlap 2643441 GCAAATGATCCAAAT CGGCCTCGAC TCT GTTGAGGCCG GTTTTTTATTGGCCA TERM 3048 2643599 - 2643589 - f 73 -5.4 -4.58773 | CGCAGTAAAGTAAAA CTGA CAC TCAG AATACCAAAGCGCAC TERM 3049 2643826 - 2643810 - g 87 -10.9 -4.27316 | CGTGCTAATTTAAAA CCTGTGA TGA TCACAGG TATGCAGCAAGGTGG TERM 3050 2644313 - 2644299 - g 79 -10 -3.91897 | opp_overlap 2644288 CGTCTGATGGACAAA GTTGCC AAT GGCAAC ATCATCCTTCATTTA Shew185_2218 2643717 - 2644670 + | thioredoxin reductase TERM 3051 2644693 - 2644711 + T 100 -13.2 -5.40072 | opp_overlap 2644693 CGATTTTTCAACGAA TAGCAGGC TTA GCCTGCTA TTTTTTTAGCCCAAA TERM 3052 2644711 - 2644693 - T 93 -13.2 -3.34344 | opp_overlap 2644693 CGATTTTTCAACGAA TAGCAGGC TTA GCCTGCTA TTTTTTTAGCCCAAA TERM 3053 2644909 - 2644894 - T 100 -10.4 -5.60993 | opp_overlap 2644894 TGGCGCACAAAAAAA GGGACC AAAT GGTCCC TTCTCTACAGCAACA TERM 3054 2644894 - 2644909 + T 79 -10.4 -3.48276 | opp_overlap 2644894 TGGCGCACAAAAAAA GGGACC AAAT GGTCCC TTCTCTACAGCAACA Shew185_2219 2645291 - 2644935 - | 50S ribosomal protein L20 Shew185_2220 2645502 - 2645308 - | 50S ribosomal protein L35 TERM 3055 2645546 - 2645566 + r 72 -9.7 -3.02204 | opp_overlap 2645542 2645541 2645538 2645551, overlap 2645544 TAAAAAGCAAGGCGA GCAAAGGCC ATA GACCTTTGC TACTTTAAGTTTTGC Shew185_2221 2646129 - 2645587 - | translation initiation factor IF-3 Shew185_2222 2648061 - 2646133 - | threonyl-tRNA synthetase TERM 3056 2646766 - 2646783 + g 75 -5.5 -4.83169 | CGCTCTGTCCCACAT CGCATCG TCAC CGATACG TTTTTCTGGGCGAGT TERM 3057 2648161 - 2648179 + H 100 -12.4 -4.30987 | TACAGGAGTCTTAGC CGCCTTGC GTA GCAGGGCG TTTATTCTAAGGGAT TERM 3058 2648264 - 2648247 - H 78 -2.7 -5.40464 | GATTAGAAACAAAAA GCAAATT CATG ATTTTGC AGTGTCTTGGTAACT Shew185_2223 2648352 - 2648582 + | hypothetical protein TERM 3059 2648823 - 2648835 + F 72 -9.1 -3.41292 | opp_overlap 2648821, overlap 2648822 TGTGCTGATTGAACT GAGCG ATT CGCTC TATTCTATTGGGGCT Shew185_2224 2648896 - 2649096 + | hypothetical protein Shew185_2225 2649754 - 2649131 - | riboflavin synthase subunit alpha TERM 3060 2650359 - 2650377 + G 74 -6.6 -4.42765 | CGATGGGCGGGGCTG GCTGTGGT ATT GCCACCGC TTTAGTTTTTTGGGC Shew185_2226 2649788 - 2651167 + | MATE efflux family protein TERM 3061 2651216 - 2651188 - f 73 -8.8 -3.77087 | opp_overlap 2651192, overlap 2651192 TAGGCAAGATTTAAA GCAACGGCGAGC ATTAA GCTCGCCGTTTT GTTTATGTCTTAGTG TERM 3062 2651192 - 2651212 + F 100 -14 -5.08878 | opp_overlap 2651192 2651188 CAAGATTTAAAGCAA CGGCGAGC ATTAA GCTCGCCG TTTTGTTTATGTCTT TERM 3063 2651212 - 2651192 - f 95 -14 -3.56937 | opp_overlap 2651192, overlap 2651188 CAAGATTTAAAGCAA CGGCGAGC ATTAA GCTCGCCG TTTTGTTTATGTCTT Shew185_2227 2651835 - 2652749 + | hypothetical protein Shew185_2228 2653652 - 2652864 - | hypothetical protein TERM 3064 2653766 - 2653778 + r 100 -10.5 -5.36689 | GTGATGAGTACTGCG CCCGC TAA GCGGG TTTTGTTTTTCGTTT Shew185_2229 2654994 - 2653957 - | diguanylate cyclase with PAS/PAC sensor Shew185_2230 2657100 - 2655181 - | integral membrane sensor hybrid histidine kinase TERM 3065 2655780 - 2655770 - G 71 -8.2 -3.76968 | opp_overlap 2655766 2655770, overlap 2655771 AAGGGATCGACTAAA GCGC GCT GCGC TTCCTTTGACATACC TERM 3066 2655813 - 2655838 + g 100 -9 -4.67234 | CGCCAAAATCGCGGA TCAGCACCCT AAGCAC AGGGCGCTGA TTTTTAGCATTCGCT Shew185_2231 2657401 - 2657090 - | hypothetical protein Shew185_2232 2658599 - 2657391 - | response regulator receiver modulated diguanylate phosphodiesterase Shew185_2233 2659576 - 2658596 - | XRE family transcriptional regulator Shew185_2234 2660416 - 2660117 - | helix-turn-helix domain-containing protein TERM 3067 2661025 - 2661011 - R 73 -8.6 -3.72576 | GCGCTTTGGATGAAA GGTTTG AAC CAAACC TTGGGGTCAGTACTT TERM 3068 2661252 - 2661280 + r 100 -16.9 -5.01811 | opp_overlap 2661252 GTTAGTCGTAAAAAA GAGGTTAACCGTG TTC TACGGTTAACCTC TTTTTCATTTAATCA TERM 3069 2661280 - 2661252 - R 100 -16.2 -5.03314 | opp_overlap 2661252 GTTAGTCGTAAAAAA GAGGTTAACCGT GTTCT ACGGTTAACCTC TTTTTCATTTAATCA TERM 3070 2661563 - 2661534 - R 76 -7.1 -4.19704 | overlap 2661535 TAACGCCAGCTAAAA GCCATGTCCGCTA AATT TGGCAGACATGGG ATTAGGATTAGCTGC TERM 3071 2661562 - 2661535 - R 79 -10.6 -3.11341 | overlap 2661534 AACGCCAGCTAAAAG CCATGTCCGCTA AATT TGGCAGACATGG GATTAGGATTAGCTG Shew185_2236 2662164 - 2661571 - | hypothetical protein TERM 3072 2662178 - 2662194 + H 80 -8 -4.43815 | opp_overlap 2662178 2662177 ATGGGAATTCCAAAT TCAGCC CAATT GGCTGA TTTTACTGTATTAGT Shew185_2237 2662989 - 2664599 + | ABC transporter related TERM 3073 2664677 - 2664648 - T 76 -9.3 -3.74693 | opp_overlap 2664650, overlap 2664650 CGTTATCGTATTAAA GAGTCGTCATTGG TTAT CCAGTGACGACTT TTTTATTGGGCTAAA TERM 3074 2664675 - 2664650 - T 89 -11.9 -3.4582 | opp_overlap 2664650, overlap 2664648 TTATCGTATTAAAGA GTCGTCATTGG TTAT CCAGTGACGAC TTTTTTATTGGGCTA TERM 3075 2664650 - 2664675 + T 100 -14.1 -5.46657 | opp_overlap 2664650 2664648 TTATCGTATTAAAGA GTCGTCATTGG TTAT CCAGTGACGAC TTTTTTATTGGGCTA Shew185_2238 2665614 - 2664718 - | hypothetical protein Shew185_2239 2666743 - 2665682 - | HNH nuclease Shew185_2240 2667413 - 2666733 - | methyltransferase type 12 Shew185_2241 2667802 - 2669442 + | response regulator receiver modulated diguanylate cyclase Shew185_2242 2670592 - 2669543 - | response regulator receiver modulated CheB methylesterase Shew185_2243 2671216 - 2670596 - | chemoreceptor glutamine deamidase CheD Shew185_2244 2672048 - 2671203 - | protein-glutamate O-methyltransferase TERM 3076 2671545 - 2671533 - G 77 -4.8 -5.00616 | opp_overlap 2671522 TCCGCGGTGAAAAAA CCGT TTCTT ACGG ATATCGCTGACAGTA Shew185_2245 2674043 - 2672049 - | methyl-accepting chemotaxis sensory transducer TERM 3077 2672284 - 2672297 + g 76 -9.5 -3.62046 | GATTGCATGCTTTCA GCGGC GGCG GCCGC TTCTTCAACCAATGC TERM 3078 2672914 - 2672926 + g 70 -7.7 -3.96148 | opp_overlap 2672909, overlap 2672915 CTGGATAAATCGGCG TTGCC TTG GGCAA TTTCTGCTGAGGCAG TERM 3079 2673867 - 2673899 + g 77 -8.3 -4.18488 | opp_overlap 2673865 CTCTTTACGAATATC GTCCTCGGCCTCTTG AAG CAAGCGGACGACGGC TTTATTCGCATAGAT Shew185_2246 2674543 - 2674049 - | putative CheW protein Shew185_2247 2676758 - 2674572 - | CheA signal transduction histidine kinase TERM 3080 2675441 - 2675460 + g 71 -5 -4.59853 | overlap 2675443 TTTCTGTGTTGCCAC CTTCAATC ACGA GATTGACG TTTTTACCCAGTTGC TERM 3081 2675731 - 2675747 + g 77 -4.3 -5.02074 | overlap 2675732 2675734 2675740 2675740 CTTAAGGTGGCATCC TGAGCCG ACG CGGCTGG TTTTTTAGCCGCTGC Shew185_2248 2677141 - 2676776 - | response regulator receiver protein Shew185_2249 2678878 - 2677145 - | response regulator receiver protein TERM 3082 2678065 - 2678052 - G 70 -9.5 -3.10493 | GCCTGAATATACACA GGCGG CATA CCGCC ATTCCAAATGTGTAA Shew185_2250 2679171 - 2678887 - | SpoIIAA family protein Shew185_2251 2680328 - 2679186 - | methyl-accepting chemotaxis sensory transducer TERM 3083 2680707 - 2680720 + G 71 -4.5 -4.57837 | opp_overlap 2680706 GTGTTGATGAAAAAC CTGCT CTCC AGCGG TTTTTCGGGGCCTAT TERM 3084 2681935 - 2681947 + G 74 -6.9 -4.3898 | ATCGTACGCCCGAAG GCGCC GTG GGTGC TTTTATGCACATGGT Shew185_2252 2680605 - 2683310 + | CoA-binding domain-containing protein TERM 3085 2683328 - 2683357 + T 95 -13.7 -3.35438 | opp_overlap 2683333, overlap 2683333 CCTATCCAAACTTAA AAAAACGCCGCAA TGAT TTGCGGCGTTTTG TTATCACATCTGCTG TERM 3086 2683333 - 2683352 + T 100 -13.6 -4.78237 | opp_overlap 2683333, overlap 2683328 CCAAACTTAAAAAAA CGCCGCAA TGAT TTGCGGCG TTTTGTTATCACATC TERM 3087 2683352 - 2683333 - T 100 -13.6 -5.58209 | opp_overlap 2683333 2683328 CCAAACTTAAAAAAA CGCCGCAA TGAT TTGCGGCG TTTTGTTATCACATC Shew185_2253 2684598 - 2683570 - | diguanylate cyclase TERM 3088 2684724 - 2684707 - R 93 -9.9 -5.13722 | opp_overlap 2684707 GGGAGCAAAAGAAAA GAGGATG TTGC CATCCTC TTTGAAGTTCGAACT TERM 3089 2684707 - 2684724 + r 79 -9.9 -3.66356 | opp_overlap 2684707 GGGAGCAAAAGAAAA GAGGATG TTGC CATCCTC TTTGAAGTTCGAACT Shew185_2254 2686495 - 2684870 - | hypothetical protein TERM 3090 2686021 - 2685993 - G 73 -2.3 -5.04377 | TGAAAATAAAAGAAA GCAATAATGCCGA GCC CCGCCAACATCGC CAGCATAAACAGCAC TERM 3091 2686556 - 2686574 + r 74 -3.8 -5.06451 | opp_overlap 2686569 ATTCTTAAGGTAATC TTAGGCTG TAA CAGTCAAA TTTTTTGCCATAGTA TERM 3092 2686659 - 2686684 + r 90 -8.3 -5.14563 | gap 1, opp_overlap 2686659 ACAAACTTAAAAAAA CGGCCGAACCTC AAT GAG-TTCGACCG TTTTTTGCTCCCCAA TERM 3093 2686684 - 2686659 - R 100 -10.5 -5.59564 | gap 1, opp_overlap 2686659 ACAAACTTAAAAAAA CGGCCGAACCTC AAT GAG-TTCGACCG TTTTTTGCTCCCCAA Shew185_2255 2688857 - 2686764 - | prolyl oligopeptidase TERM 3094 2687542 - 2687581 + g 71 -3 -4.96468 | gap 1, opp_overlap 2687548, overlap 2687549 AAGTATTGCTCGGTT TTAAACTTGT-CCGCAGCA AAC TGTTGCGGCATACCTTTAA TTTTCTTTGGATTTA TERM 3095 2689043 - 2689027 - R 100 -9.4 -5.24129 | opp_overlap 2689027, overlap 2688996 TCGTGCTATAAAAAA GCGTCC ACGAG GGACGC TTTTTAGTCGATGAC TERM 3096 2689027 - 2689043 + r 93 -9.4 -4.7497 | opp_overlap 2688996 2689027 TCGTGCTATAAAAAA GCGTCC ACGAG GGACGC TTTTTAGTCGATGAC Shew185_2256 2689548 - 2689069 - | MarR family transcriptional regulator Shew185_2257 2690813 - 2689548 - | cation diffusion facilitator family transporter TERM 3097 2691921 - 2691931 + G 73 -5.4 -4.52589 | GCTACGACAGTCGTT TACC TAA GGTA TTTTATCTACCAGAA Shew185_2258 2691455 - 2692006 + | ecotin precursor TERM 3098 2692042 - 2692089 + T 81 -11.5 -3.07291 | opp_overlap 2692042, overlap 2692037 GAGTCATCAATCGAA TGCGCTTCGAGTCTTTGCT GATTGATAAA AGCAAAGACTCGAAGAACA TTAACTAGAATCGTT TERM 3099 2692089 - 2692042 - T 93 -13.7 -3.21199 | opp_overlap 2692037 2692042 GAGTCATCAATCGAA TGCGCTTCGAGTCTTTGCT GATTGATAAA AGCAAAGACTCGAAGAACA TTAACTAGAATCGTT Shew185_2259 2692387 - 2692094 - | hypothetical protein Shew185_2260 2694350 - 2692362 - | ATP-dependent DNA helicase RecQ TERM 3100 2692777 - 2692761 - G 73 -10.1 -3.23611 | opp_overlap 2692761 2692762, overlap 2692762 AAAAAAGCGGACTAA CTGCGCG ATT CGCGCAA TTTCTTTCTGCTCTT TERM 3101 2692761 - 2692777 + g 81 -7.9 -4.61852 | opp_overlap 2692761 2692762, overlap 2692762 AAAAAAGCGGACTAA CTGCGCG ATT CGCGCAA TTTCTTTCTGCTCTT TERM 3102 2692762 - 2692776 + g 82 -11.4 -3.35485 | opp_overlap 2692761 2692762, overlap 2692761 AAAAAGCGGACTAAC TGCGCG ATT CGCGCA ATTTCTTTCTGCTCT TERM 3103 2692776 - 2692762 - G 75 -11.4 -2.53082 | opp_overlap 2692762 2692761, overlap 2692761 AAAAAGCGGACTAAC TGCGCG ATT CGCGCA ATTTCTTTCTGCTCT Shew185_2261 2695025 - 2694687 - | hypothetical protein Shew185_2262 2695774 - 2695235 - | hypothetical protein TERM 3104 2695862 - 2695872 + H 75 -5.4 -4.67982 | opp_overlap 2695860 2695862 ACAAGTATTAATATA TGGT TCA ACCA TTTTATTGGCTGGGA TERM 3105 2696052 - 2696036 - H 73 -9.5 -3.1585 | opp_overlap 2696036 2696039 2696041, overlap 2696034 2696039 TCATGCAAGCCAATA GAATGGT TAA ACCATTC TTTAACATTGTGAAT TERM 3106 2696036 - 2696052 + H 79 -9.5 -3.69621 | opp_overlap 2696036 2696034 2696039, overlap 2696039 2696041 TCATGCAAGCCAATA GAATGGT TAA ACCATTC TTTAACATTGTGAAT TERM 3107 2696308 - 2696265 - H 74 -6.3 -4.34285 | gap 2, opp_overlap 2696265 2696263, overlap 2696262 2696266 2696267 TATTTAAACAAATAA GC-GC-TCTACCAGTGATAAT GACG ATTATCACTGGTAGATATAGC TATGTTTTGCGTATA TERM 3108 2696304 - 2696267 - H 79 -11.5 -2.50607 | opp_overlap 2696265 2696263, overlap 2696266 2696265 2696262 TTTAAACAAATAAGC GCTCTACCAGTGATAAT GACG ATTATCACTGGTAGATA TAGCTATGTTTTGCG TERM 3109 2696457 - 2696473 + G 80 -3 -5.41143 | gap 1, opp_overlap 2696457 CATCACCATAATAAC CGT-GCT GAAC AGCCACG TTTTTTTGAAGAGTC Shew185_2263 2696364 - 2697479 + | phage integrase family protein TERM 3110 2698464 - 2698454 - g 71 -8.2 -3.75884 | opp_overlap 2698452 GCGCAAAGAAATTAA CGCC CAT GGCG TGTCGGTTGTTCGTA Shew185_2264 2697885 - 2699942 + | hypothetical protein TERM 3111 2700044 - 2700025 - T 100 -13.6 -4.54047 | opp_overlap 2700025 TTAGCCTATATAAAA CTCCCCTC AAGT GAGGGGAG TTTTTATTTAAGTTA TERM 3112 2700025 - 2700044 + T 100 -13.6 -5.33026 | opp_overlap 2700025 TTAGCCTATATAAAA CTCCCCTC AAGT GAGGGGAG TTTTTATTTAAGTTA TERM 3113 2700051 - 2700073 + T 93 -10.8 -5.0916 | opp_overlap 2700056 TGAGGGGAGTTTTTA TTTAAGTTAG TCG CTAACTTAAA TTTTTATATTACCCA Shew185_2265 2700870 - 2700106 - | DTW domain-containing protein TERM 3114 2701885 - 2701860 - g 77 -4.7 -4.89521 | opp_overlap 2701860 AGAGTTTAAATAAAA CGTTTGAACAA GCAC TTGAGCAAACG CTATTTCCACAATTA TERM 3115 2702313 - 2702301 - g 80 -6.9 -4.71426 | opp_overlap 2702302, overlap 2702302 TGTGGATTAATAAAA CCGGC TCA ACCGG CGGTTTTGCCGCTTA Shew185_2266 2701268 - 2702452 + | beta-lactamase TERM 3116 2702478 - 2702502 + F 100 -5.8 -5.80003 | opp_overlap 2702478 GTCGCGACGATTAAA GGAGATAG GCCGATTCG CTATCTCC TTTTTTATTTGTTCC TERM 3117 2703531 - 2703542 + G 70 -2.2 -4.93877 | CGCCATAGAGCGTTT CGAG CTTA CTTG TTTTCTTTGATCGCG Shew185_2267 2702862 - 2704094 + | multidrug resistance protein D TERM 3118 2704235 - 2704218 - T 100 -8.4 -5.72053 | opp_overlap 2704218 2704234 TAATTAAACAAAAAA GCCCAC TACAAT GTGGGC TTTTTAATCGGTAAC TERM 3119 2704218 - 2704235 + T 88 -8.4 -4.7497 | opp_overlap 2704218, overlap 2704234 TAATTAAACAAAAAA GCCCAC TACAAT GTGGGC TTTTTAATCGGTAAC TERM 3120 2704345 - 2704329 - T 80 -6.5 -4.72272 | GCGGCGCAGTAAAAA GTCGGCT TTA AGGCGAC GAATTCGGGTCATGA Shew185_2268 2705618 - 2704305 - | phosphatidylserine synthase Shew185_2269 2705962 - 2705630 - | hypothetical protein Shew185_2270 2706438 - 2706614 + | hypothetical protein TERM 3121 2707309 - 2707285 - g 77 -8.6 -4.1711 | gap 1 AGCACGGCCAATAAA CCAT-CGCAGG TGAG CCTGCGCACGG GGAGTTATGGGGTAA Shew185_2271 2706682 - 2708190 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 3122 2708223 - 2708255 + T 93 -7.2 -5.41941 | gap 1, opp_overlap 2708230, overlap 2708225 2708230 TAGCATGATATAAAA C-AAAAAAGCACTGA ATAA TCAGTGCTTTTCTCG TTTTTATTTCGTTTC TERM 3123 2708225 - 2708252 + T 79 -10 -3.46035 | opp_overlap 2708230, overlap 2708223 2708230 GCATGATATAAAACA AAAAAGCACTGA ATAA TCAGTGCTTTTC TCGTTTTTATTTCGT TERM 3124 2708247 - 2708230 - T 100 -9.9 -5.8901 | opp_overlap 2708225 2708223 2708230 ATATAAAACAAAAAA GCACTGA ATAA TCAGTGC TTTTCTCGTTTTTAT TERM 3125 2708230 - 2708247 + T 93 -9.9 -4.73912 | opp_overlap 2708230, overlap 2708225 2708223 ATATAAAACAAAAAA GCACTGA ATAA TCAGTGC TTTTCTCGTTTTTAT Shew185_2272 2710055 - 2708298 - | acyl-CoA dehydrogenase domain-containing protein TERM 3126 2708410 - 2708429 + g 73 -7.2 -4.24745 | gap 1, opp_overlap 2708409 2708410 AACTTAGCTAAATAG GCTTTCTGC TCG GC-GAAAGC TTTATCTTCATGATC TERM 3127 2708855 - 2708828 - G 78 -6.2 -4.72986 | CATGTCCACCAAAAA CTTGCTGCGCCA TGAT CGTCGCATCAAG ACCGCGATCGGTTAA TERM 3128 2710194 - 2710215 + r 70 -8.8 -3.30825 | opp_overlap 2710194, overlap 2710192 2710190 CAACCCATAAAAAAA CCCTTAAG CTTGAA CTTAAGGG TCTCTATTTTATAAG TERM 3129 2710215 - 2710194 - R 100 -9.5 -5.66684 | opp_overlap 2710194 2710192 2710190 CAACCCATAAAAAAA CCCTTAAGC TTGA ACTTAAGGG TCTCTATTTTATAAG Shew185_2273 2710819 - 2710277 - | hypothetical protein Shew185_2274 2711711 - 2710890 - | short chain dehydrogenase TERM 3130 2711429 - 2711387 - G 81 -11.3 -3.6284 | gap 2, overlap 2711388 AACCATTAGCCGAAA GCTTTGCGGCGCTGGCAGGGA AAT TACCCGCC-GCGCCGCTAA-C TAGCACATCGATAAA TERM 3131 2711429 - 2711388 - G 76 -11.5 -2.77222 | gap 1, overlap 2711387 ACCATTAGCCGAAAG CTTTGCGGCGCTGGCAGGGA AAT TACCCGCC-GCGCCGCTAAC TAGCACATCGATAAA Shew185_2275 2712582 - 2711887 - | orotidine 5'-phosphate decarboxylase Shew185_2276 2713786 - 2712626 - | hypothetical protein Shew185_2277 2714063 - 2713788 - | hypothetical protein TERM 3132 2714152 - 2714167 + r 93 -10.4 -4.80882 | opp_overlap 2714152 AATAGATACAAAAAA GCCTCC TAAC GGAGGC TTTTTACTATGCGGT TERM 3133 2714167 - 2714152 - R 100 -10.4 -5.46276 | opp_overlap 2714152 AATAGATACAAAAAA GCCTCC TAAC GGAGGC TTTTTACTATGCGGT Shew185_2278 2714473 - 2714186 - | integration host factor, beta subunit Shew185_2279 2716214 - 2714547 - | 30S ribosomal protein S1 Shew185_2280 2717009 - 2716317 - | cytidylate kinase Shew185_2281 2718476 - 2717196 - | 3-phosphoshikimate 1-carboxyvinyltransferase Shew185_2282 2718912 - 2720102 + | aromatic amino acid aminotransferase TERM 3134 2720131 - 2720166 + F 70 -5.6 -4.43877 | gap 1, overlap 2720121 TATCTGCACAGTTCA CTCTGCTGTATTGCT ACGATTC AG-GATGCAGCAGAG TTTATTTACCCCTTA TERM 3135 2720561 - 2720542 - gf 73 -3.6 -4.88407 | TCACCTAAGCAAAAA TCCAAC TATTTAGC GTTGGA GGCAGAGGCGAGCTT Shew185_2283 2720479 - 2722041 + | hypothetical protein TERM 3136 2722082 - 2722105 + GT 77 -8.8 -3.9461 | overlap 2722084 CCCTTTTCCTGCGTT GACGGGCCTG GCAG CAGGCTCGTG TTATTCTTGCAAGGC TERM 3137 2722084 - 2722103 + GT 88 -11.4 -3.56318 | overlap 2722082 CTTTTCCTGCGTTGA CGGGCCTG GCAG CAGGCTCG TGTTATTCTTGCAAG Shew185_2284 2722013 - 2722909 + | radical SAM domain-containing protein Shew185_2285 2723826 - 2722906 - | LysR family transcriptional regulator TERM 3138 2724097 - 2724076 - R 100 -10.2 -5.49234 | opp_overlap 2724076 ACAGCCAACAAAAAA GCGAATGC ATTTGA GCATTCGC TTTTGGGATATCTAA TERM 3139 2724076 - 2724097 + r 89 -10.2 -4.18401 | opp_overlap 2724076 ACAGCCAACAAAAAA GCGAATGC ATTTGA GCATTCGC TTTTGGGATATCTAA TERM 3140 2724206 - 2724194 - R 73 -10.5 -2.78049 | overlap 2724190 AGGCAGCAAAACCTA GGCGC TAA GCGCC GCAAGCTAGTGAGTG Shew185_2286 2725328 - 2724237 - | phosphoserine aminotransferase TERM 3141 2725448 - 2725427 - R 100 -15.9 -5.52986 | opp_overlap 2725427 ATGCCATTAAAAAAA CGAGCGTCC AATT GGACGCTCG TTAATATGACACTTA TERM 3142 2725427 - 2725448 + r 100 -15.9 -3.26947 | opp_overlap 2725427 ATGCCATTAAAAAAA CGAGCGTCC AATT GGACGCTCG TTAATATGACACTTA Shew185_2287 2728215 - 2725465 - | DNA gyrase, A subunit TERM 3143 2726922 - 2726940 + g 81 -8.1 -4.58395 | gap 1 CTAACCACTCAGGAC GCGCGGCG TCAT CGCC-CGC TTTTTCCAGCATGCC TERM 3144 2728498 - 2728487 - H 75 -5.8 -4.74767 | ACAATTAACATAAAA GCAG AAAA CTGC TGAAAATTCACTCAA Shew185_2288 2728601 - 2729311 + | 3-demethylubiquinone-9 3-methyltransferase Shew185_2289 2729313 - 2729984 + | HAD family hydrolase TERM 3145 2730055 - 2730086 + F 72 -4.4 -4.66163 | opp_overlap 2730056 2730058 2730059, overlap 2730056 2730058 2730059 2730064 CTTTTGCTAAAGCCA ATATGCAGACACAC ATAA GTGTGTTTGCCTGA TTTTTACCTGAGAAT TERM 3146 2730082 - 2730059 - f 70 -9.6 -2.51888 | opp_overlap 2730059 2730058 2730056 2730055 2730064, overlap 2730058 2730056 TGCTAAAGCCAATAT GCAGACACAC ATAA GTGTGTTTGC CTGATTTTTACCTGA TERM 3147 2730059 - 2730082 + F 81 -11.8 -2.55361 | opp_overlap 2730058 2730056 2730059, overlap 2730058 2730056 2730055 2730064 TGCTAAAGCCAATAT GCAGACACAC ATAA GTGTGTTTGC CTGATTTTTACCTGA TERM 3148 2730154 - 2730134 - f 74 -6.2 -4.36914 | gap 1 GGTCGGCGGATAAAA GATCG-GCA CTTG TGCGCGATC GCGATCTAAAGAAAA Shew185_2290 2730511 - 2732799 + | ribonucleotide-diphosphate reductase subunit alpha TERM 3149 2732866 - 2732834 - f 93 -7.8 -5.38054 | opp_overlap 2732837, overlap 2732837 TCTTACAAATAAAAA GTATAGGGATCC CGATTGAGT GGATCCCTATCC ATTGGAAAATAGCAC Shew185_2291 2732853 - 2734013 + | ribonucleotide-diphosphate reductase subunit beta TERM 3150 2734156 - 2734137 - g 74 -10.8 -2.87132 | overlap 2734141 2734145 GTTGCTCTTTACAGA GCAACAAG GCAC CTTGTTGC AAGCGCTCGAGGCAA Shew185_2292 2734051 - 2734473 + | ferredoxin TERM 3151 2734725 - 2734692 - T 100 -14.7 -4.07885 | opp_overlap 2734699, overlap 2734699 CATTCCCGCGGAAAA CCAAAAAGCCTGAAC TCAG GTTCAGGCTTTCAGG ATCCAAAATGTAAAA TERM 3152 2734718 - 2734699 - T 100 -12.2 -5.0925 | opp_overlap 2734699, overlap 2734692 GCGGAAAACCAAAAA GCCTGAAC TCAG GTTCAGGC TTTCAGGATCCAAAA TERM 3153 2734699 - 2734718 + T 89 -12.2 -3.57144 | opp_overlap 2734699 2734692 GCGGAAAACCAAAAA GCCTGAAC TCAG GTTCAGGC TTTCAGGATCCAAAA Shew185_2293 2736792 - 2734774 - | NADH:flavin oxidoreductase/NADH oxidase Shew185_2294 2736958 - 2738805 + | signal peptide peptidase SppA, 67K type TERM 3154 2738860 - 2738875 + F 100 -11.8 -5.52096 | opp_overlap 2738860 GATGACAAAGACAAA GCCCGG ATCT CCGGGC TTTTTTATTGGGTTT TERM 3155 2738875 - 2738860 - f 95 -11.8 -4.41609 | opp_overlap 2738860 GATGACAAAGACAAA GCCCGG ATCT CCGGGC TTTTTTATTGGGTTT Shew185_2295 2738943 - 2739956 + | cytoplasmic asparaginase I TERM 3156 2740029 - 2740049 + T 100 -12.6 -4.73682 | GGTTGACAGTTTTTA GGCCAGCT CCAGT AGCTGGCC TTTTCTATTGTGCAC Shew185_2296 2740829 - 2740026 - | integrase catalytic region TERM 3157 2740240 - 2740260 + g 74 -11.1 -2.79327 | opp_overlap 2740240, overlap 2740239 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 3158 2740260 - 2740240 - G 79 -11.1 -3.54029 | opp_overlap 2740239 2740240 TGGTAGCAATCATAA CCATCCGTC ATT GACGGCTGG ATTTGGCTCGCCTGA TERM 3159 2740535 - 2740585 + g 74 -2.6 -5.01546 | gap 1, opp_overlap 2740552 CATCATGTAGCCCTT CCTCTTTCAGCAGAT-TAGGATG CTTCTT CATCCAGTGTTTGCTGAACGTGG TTTTTGTGTAGCTTT TERM 3160 2740831 - 2740857 + r 79 -6.6 -4.59089 | overlap 2740831 CCTTGCCTCGTCATA CC-CGCAGCACG ACATG CG-GCTGCGAGG TTTATTTCTCCGTTG Shew185_2297 2741254 - 2740859 - | transposase TERM 3161 2741305 - 2741333 + r 70 -9 -3.11341 | opp_overlap 2741311, overlap 2741311 GGGACAACTAGTAAC AAAAAAGCCCAT TAGAT ATGGGCTTTTTA ATTTTAACTCAGATT TERM 3162 2741311 - 2741327 + r 88 -8 -5.10154 | opp_overlap 2741311, overlap 2741305 ACTAGTAACAAAAAA GCCCAT TAGAT ATGGGC TTTTTAATTTTAACT TERM 3163 2741327 - 2741311 - R 93 -8 -5.52023 | opp_overlap 2741305 2741311 ACTAGTAACAAAAAA GCCCAT TAGAT ATGGGC TTTTTAATTTTAACT Shew185_2298 2741655 - 2741374 - | hypothetical protein Shew185_2299 2741969 - 2741652 - | hypothetical protein Shew185_2300 2743109 - 2741982 - | peptidase M14 carboxypeptidase A Shew185_2301 2744014 - 2743334 - | two component transcriptional regulator TERM 3164 2744252 - 2744225 - R 85 -11.4 -3.32963 | opp_overlap 2744232, overlap 2744232 AGCTCCATTTCACAA TAAAAAAGCGCC CTAA GGCGCTTTTTAA ACACTAAGAGTATTA TERM 3165 2744232 - 2744245 + r 91 -9.5 -4.58395 | opp_overlap 2744232 2744225 TTTCACAATAAAAAA GCGCC CTAA GGCGC TTTTTAAACACTAAG TERM 3166 2744245 - 2744232 - R 100 -9.5 -5.55769 | opp_overlap 2744232, overlap 2744225 TTTCACAATAAAAAA GCGCC CTAA GGCGC TTTTTAAACACTAAG Shew185_2302 2746836 - 2744275 - | TonB-dependent receptor plug TERM 3167 2747811 - 2747793 - R 100 -14.6 -5.37345 | opp_overlap 2747793 TTTAACCATAAAAAA GGCGACCT CTT AGGTCGCC TTTCATTATCGGTAT TERM 3168 2747793 - 2747811 + r 100 -14.6 -4.0127 | opp_overlap 2747793 TTTAACCATAAAAAA GGCGACCT CTT AGGTCGCC TTTCATTATCGGTAT Shew185_2303 2748845 - 2747841 - | Holliday junction DNA helicase B Shew185_2304 2749510 - 2748893 - | Holliday junction DNA helicase RuvA Shew185_2305 2750028 - 2749507 - | crossover junction endodeoxyribonuclease RuvC Shew185_2306 2750895 - 2750149 - | hypothetical protein TERM 3169 2751049 - 2751024 - R 100 -13.3 -4.2558 | opp_overlap 2751026 2751028, overlap 2751026 GACGGTTCACTAAAA CAGACCGAGGC TTGC GCCTCGGTCTT CGGTACGACTAAAAA TERM 3170 2751026 - 2751047 + r 100 -15.9 -3.06183 | opp_overlap 2751024 2751026, overlap 2751028 CGGTTCACTAAAACA GACCGAGGC TTGC GCCTCGGTC TTCGGTACGACTAAA TERM 3171 2751047 - 2751026 - R 100 -15.9 -3.73042 | opp_overlap 2751026 2751028, overlap 2751024 CGGTTCACTAAAACA GACCGAGGC TTGC GCCTCGGTC TTCGGTACGACTAAA TERM 3172 2751028 - 2751045 + r 84 -12.7 -3.08996 | opp_overlap 2751026 2751024, overlap 2751026 GTTCACTAAAACAGA CCGAGGC TTGC GCCTCGG TCTTCGGTACGACTA Shew185_2307 2752982 - 2751204 - | aspartyl-tRNA synthetase TERM 3173 2753066 - 2753041 - R 80 -6.2 -4.6709 | overlap 2753042 CAAAACGAGATAAAA GCGGCATTAT AGTAAA ATAATGCCGA TTACCAAAGTACTTC TERM 3174 2753065 - 2753042 - R 75 -9.7 -3.38627 | overlap 2753041 AAAACGAGATAAAAG CGGCATTAT AGTAAA ATAATGCCG ATTACCAAAGTACTT Shew185_2308 2755953 - 2753167 - | diguanylate cyclase TERM 3175 2754889 - 2754875 - G 71 -9.2 -3.55219 | AACTCCACCAGATAA GGCGCC GTC GGCACC ACCCCAATACGTTTA Shew185_2309 2756128 - 2756859 + | putative methyltransferase Shew185_2310 2756856 - 2757851 + | putative methyltransferase TERM 3176 2758048 - 2758015 - g 93 -13.4 -3.7282 | gap 1, overlap 2758018 TTAGCCCAGCAACAA GAC-TCGCTGATTGA GGTCA TCAATCAGCGATGTC AACCTCAAGATACGG TERM 3177 2758044 - 2758018 - g 88 -13.9 -2.66249 | overlap 2758015 GCCCAGCAACAAGAC TCGCTGATTGA GGTCA TCAATCAGCGA TGTCAACCTCAAGAT Shew185_2311 2757886 - 2758629 + | hypothetical protein TERM 3178 2758806 - 2758796 - f 79 -3.2 -5.52909 | TAACACGCAAAAAAA TAGC TCA GCCA ACGCAGGCGTCGTGA Shew185_2312 2758957 - 2760462 + | gonadoliberin III-related protein TERM 3179 2760541 - 2760518 - gf 72 -9 -3.36273 | overlap 2760522 CGTGCTTAATATGAA CCAACGTAAT ATCG ATTACATTGG CCGTTACAATCCGCG Shew185_2313 2760465 - 2761409 + | alpha-L-glutamate ligase-like protein TERM 3180 2761542 - 2761503 - gf 88 -11.4 -3.53811 | TCTACGTTTGCCAAA CATTGAGCTCGCGTCAGC CTTC GCCAACGCGCGCTTAACG ACGGCGCAATTAACC TERM 3181 2761791 - 2761777 - gf 73 -8.6 -3.68725 | overlap 2761775 AATGCTGAACAAATA CTGTTG AGC CAACAG CTTAAACACTTGCTA TERM 3182 2762159 - 2762146 - gf 79 -9.5 -3.63991 | opp_overlap 2762143 2762146, overlap 2762136 GAGCAGCGCCAACAA GCCGC CACG GCGGC AGGCTTTACCGATTA Shew185_2314 2761384 - 2763243 + | response regulator receiver protein TERM 3183 2763292 - 2763258 - f 73 -8.6 -3.69884 | overlap 2763291 AGAGTGAATACATAA GCTGTGTTTGTGAC TCGCTCG GGCACAGACACAGC AAATCGTCATGATTC Shew185_2315 2763447 - 2764355 + | LysR family transcriptional regulator Shew185_2316 2767009 - 2764565 - | protein-glutamate O-methyltransferase Shew185_2317 2767278 - 2767015 - | methyl-accepting chemotaxis protein Shew185_2318 2768496 - 2767381 - | thiamine biosynthesis protein ThiH Shew185_2319 2769257 - 2768493 - | thiazole synthase Shew185_2320 2769462 - 2769259 - | thiamine biosynthesis protein ThiS Shew185_2321 2770399 - 2769479 - | UBA/THIF-type NAD/FAD binding protein TERM 3184 2769982 - 2769996 + g 71 -8.6 -3.73224 | GATGAGCCGATGTCG CAGCAT TAA ATGCTG TTTCATGGGCAGTAA Shew185_2322 2772281 - 2770383 - | thiamine-phosphate pyrophosphorylase Shew185_2323 2774437 - 2772314 - | thiamine biosynthesis protein ThiC TERM 3185 2773434 - 2773420 - G 79 -10 -3.86346 | opp_overlap 2773425 CCAGCGCTTGATAAA TCGGCA CTG TGCCGA TGGGCACTGGTGAGT TERM 3186 2774801 - 2774781 - R 82 -4.1 -5.4148 | CAAACAAGGAAAAAA GTAATTAAA AAT CTTAACTAC CAATCCAAAATAAAG Shew185_2324 2776224 - 2774905 - | hypothetical protein TERM 3187 2776624 - 2776665 + H 74 -5.3 -4.7261 | opp_overlap 2776632, overlap 2776632 AACAACAGAAGCCAA TCATAAAATTTAAGCTTAC AAGT GTACGCTTAAATATGGTGA TTTATTTTCCTAACT TERM 3188 2776657 - 2776632 - H 82 -7.7 -4.56093 | opp_overlap 2776632 2776624 AAGCCAATCATAAAA TTTAAGCTTAC AAGT GTACGCTTAAA TATGGTGATTTATTT TERM 3189 2776929 - 2776940 + G 73 -2.2 -5.00895 | overlap 2776919 2776918 CCATTTATGGTGCGA GCAT CATA GTGC TTTTTCTATGCTCGA Shew185_2325 2776721 - 2777404 + | hemolysin III family channel protein Shew185_2326 2778115 - 2777552 - | DTW domain-containing protein TERM 3190 2777601 - 2777579 - G 91 -12 -3.79668 | opp_overlap 2777581, overlap 2777581 ATTCAATTCAGTAAA TAGCGACGCT AAT AGCGTCGCTT GTTCTGCTCTGCCAC TERM 3191 2777599 - 2777581 - G 93 -14.6 -3.48105 | opp_overlap 2777581, overlap 2777579 TCAATTCAGTAAATA GCGACGCT AAT AGCGTCGC TTGTTCTGCTCTGCC TERM 3192 2777581 - 2777599 + g 100 -14.6 -3.87104 | opp_overlap 2777579 2777581 TCAATTCAGTAAATA GCGACGCT AAT AGCGTCGC TTGTTCTGCTCTGCC TERM 3193 2778050 - 2778088 + g 70 -9.6 -3.18912 | overlap 2778038 2778037 AGGGAATGCGGCTAA CGCGAGTTGGCCAGTA TTCGTTT TGCGGGTTAACTCGCG TTCGTGGGTCAATAA TERM 3194 2778291 - 2778273 - R 70 -3.2 -4.87133 | overlap 2778268 ATGTGTGAAATAAAA TCATATAT TAA ACACATGA TTTGAAATTGATAAA Shew185_2327 2778839 - 2778309 - | NUDIX hydrolase Shew185_2328 2779880 - 2779113 - | hypothetical protein Shew185_2329 2780136 - 2782268 + | alpha-glucosidase TERM 3195 2782380 - 2782338 - f 100 -10.1 -5.25893 | opp_overlap 2782344, overlap 2782344 ATACAGAGTAAAAAA CAGAAAGTCACCAAGGA TGTACCTTG TCCTTGGTGACTTTTTA TTGCCAAATAGCACC TERM 3196 2782374 - 2782344 - f 95 -11.3 -4.66347 | opp_overlap 2782344, overlap 2782338 AGTAAAAAACAGAAA GTCACCAAGGA TGTACCTTG TCCTTGGTGAC TTTTTATTGCCAAAT TERM 3197 2782344 - 2782374 + F 100 -12.7 -5.06816 | opp_overlap 2782338 2782344 AGTAAAAAACAGAAA GTCACCAAGGATG TACCT TGTCCTTGGTGAC TTTTTATTGCCAAAT Shew185_2330 2782639 - 2783553 + | helix-turn-helix domain-containing protein Shew185_2331 2783591 - 2784040 + | alkylhydroperoxidase TERM 3198 2784084 - 2784065 - T 90 -7.1 -5.21236 | opp_overlap 2784063 2784065, overlap 2784056 AATGGACAATAAAAA GGGCACC TAATGC AGTGCCC TGTTTGTTGGTATCA Shew185_2332 2785132 - 2784125 - | hypothetical protein TERM 3199 2785103 - 2785086 - G 83 -6.3 -5.00616 | gap 1, overlap 2785089 GCTTGTTGTAAAAAA TCATGGCG TTT CGCCA-GA GCCGTCGATAACAGC TERM 3200 2785150 - 2785138 - R 76 -4.7 -5.09685 | opp_overlap 2785144 GAATAGACATAAAAA GCGGG ACT CGCGC AGCGGAAACCTGCGT Shew185_2333 2786327 - 2785458 - | alpha/beta hydrolase fold TERM 3201 2786292 - 2786280 - G 71 -6.3 -4.1964 | GCCAATATCTGAAAA GGTTT TAA AAACC TGAGCCTGTTGTAAT Shew185_2334 2786602 - 2786393 - | hypothetical protein Shew185_2335 2786963 - 2786670 - | YCII-related TERM 3202 2787271 - 2787289 + H 73 -7.4 -4.13767 | overlap 2787274 TAAGTTCTTTCTGCT GACTGGCT TTG AGCCACTC TTTTGGACTGACCGC TERM 3203 2787382 - 2787344 - H 81 -11.9 -2.64878 | opp_overlap 2787345, overlap 2787341 2787336 TTAGAAATGAATTTA TTGGCGAATATACTTCT GAGGG AGAGGTATATTCGCCAT TTTTTCACAGAGCAG TERM 3204 2787345 - 2787381 + H 100 -17.6 -5.00616 | opp_overlap 2787344 2787341 2787336 TAGAAATGAATTTAT TGGCGAATATACTTCT GAGGG AGAGGTATATTCGCCA TTTTTTCACAGAGCA TERM 3205 2788116 - 2788132 + G 80 -6.5 -4.76644 | opp_overlap 2788115 GCCAGCGTACCCAAG GCTATGC CAT GCAAAGC TTTTTCATCGGTATT Shew185_2336 2787626 - 2789281 + | major facilitator transporter TERM 3206 2789335 - 2789312 - f 89 -11.8 -3.61398 | opp_overlap 2789309 2789312 2789314 TGTGGCGCTGAATAA GATGGCACTC AATT AAGTGCCATC TCCTTAAGTGAGGCT TERM 3207 2789312 - 2789335 + F 77 -11.1 -2.75183 | opp_overlap 2789312, overlap 2789309 2789314 TGTGGCGCTGAATAA GATGGCACT CAATTA AGTGCCATC TCCTTAAGTGAGGCT TERM 3208 2791426 - 2791408 - g 76 -2.3 -5.19212 | gap 1, opp_overlap 2791415, overlap 2791410 AGGACTACTAAAAAA CAGCGCAG GCGT CAGCGC-G CCTTACTATTTACGT Shew185_2337 2789540 - 2792116 + | glucan 1,4-alpha-glucosidase TERM 3209 2792185 - 2792169 - f 70 -3 -5.09225 | overlap 2792155 AGCGCATTGAAAAAA TGTGCT GAAAT AACACA CTAAAACAGCGCATG TERM 3210 2792266 - 2792233 - f 79 -9.7 -3.68738 | opp_overlap 2792234, overlap 2792229 2792234 GCTTTAATAAATTAA GGGCTAGAACAAC TCACAAAT GTTGTTCTAGCCT TTTTTATATCTGGCT TERM 3211 2792234 - 2792265 + F 100 -13.2 -5.4251 | opp_overlap 2792234 2792233 2792229 CTTTAATAAATTAAG GGCTAGAACAAC TCACAAAT GTTGTTCTAGCC TTTTTTATATCTGGC TERM 3212 2792265 - 2792234 - f 90 -13.2 -2.80761 | opp_overlap 2792234, overlap 2792233 2792229 CTTTAATAAATTAAG GGCTAGAACAAC TCACAAAT GTTGTTCTAGCC TTTTTTATATCTGGC Shew185_2338 2792562 - 2793746 + | hypothetical protein TERM 3213 2793786 - 2793815 + T 86 -7.3 -5.02231 | TTTGTTATGGCTGAC TCAGTTTATTCTT GCGC GGGAGTAAACTGA TTTTTCCTGTTTTTC Shew185_2339 2794633 - 2793791 - | helix-turn-helix domain-containing protein TERM 3214 2794871 - 2794890 + G 81 -10.7 -3.66995 | overlap 2794867 GGAGTACAGGTTTTT TCCCGCC CTTTAT GGCGGGA TTAATATTTTTTGCC Shew185_2340 2794714 - 2796105 + | sodium/sulphate symporter TERM 3215 2796202 - 2796163 - f 73 -7.8 -3.82499 | opp_overlap 2796166 2796167 2796169, overlap 2796165 2796166 ATTAAATTGACGAAA CACTCACCCTTGGCGG TATTGACG CCGCCAAGGGTGCTTT AGAGCAGCCATCATC TERM 3216 2796200 - 2796165 - f 79 -10.4 -3.49176 | opp_overlap 2796166 2796167 2796169, overlap 2796163 2796166 TAAATTGACGAAACA CTCACCCTTGGCGG TATTGACG CCGCCAAGGGTGCT TTAGAGCAGCCATCA TERM 3217 2796199 - 2796166 - f 91 -13.9 -2.68782 | opp_overlap 2796166 2796167 2796169, overlap 2796165 2796163 AAATTGACGAAACAC TCACCCTTGGCGG TATTGACG CCGCCAAGGGTGC TTTAGAGCAGCCATC TERM 3218 2796166 - 2796199 + F 100 -14.6 -3.53224 | opp_overlap 2796166 2796165 2796163, overlap 2796167 2796169 AAATTGACGAAACAC TCACCCTTGGCGGT ATTGAC GCCGCCAAGGGTGC TTTAGAGCAGCCATC TERM 3219 2796167 - 2796198 + F 100 -18.1 -2.71791 | opp_overlap 2796166 2796165 2796163, overlap 2796166 2796169 AATTGACGAAACACT CACCCTTGGCGGT ATTGAC GCCGCCAAGGGTG CTTTAGAGCAGCCAT TERM 3220 2796169 - 2796196 + F 95 -14.9 -2.90496 | opp_overlap 2796166 2796165 2796163, overlap 2796167 2796166 TTGACGAAACACTCA CCCTTGGCGGT ATTGAC GCCGCCAAGGG TGCTTTAGAGCAGCC Shew185_2341 2796392 - 2796811 + | putative prophage repressor TERM 3221 2797665 - 2797648 - g 77 -6.3 -4.56775 | gap 1, overlap 2797650 AGGGCCTGTGAAAAA CT-GCGCT CCG AGCGCCAG TACGCTAAAGCAATG Shew185_2342 2796808 - 2798082 + | DNA-directed DNA polymerase TERM 3222 2798237 - 2798203 - T 71 -6.4 -4.19215 | opp_overlap 2798209 2798215 2798216, overlap 2798205 2798207 TAGATCTAAAAAATA TATAGCGCTAAGCCCC GTT GGGTGTTAACGCTAAA GTGGCATTAACACCC TERM 3223 2798235 - 2798205 - T 76 -9 -3.67773 | opp_overlap 2798209 2798215 2798216, overlap 2798203 2798207 GATCTAAAAAATATA TAGCGCTAAGCCCC GTT GGGTGTTAACGCTA AAGTGGCATTAACAC TERM 3224 2798265 - 2798207 - T 70 -8.3 -3.39995 | gap 2, opp_overlap 2798209 2798215 2798216, overlap 2798205 2798203 TCTAAAAAATATATA GCGCTAAGCCCCGTTGGGTGTTAACGCTA AAG TGGCATTAACACCCATCAAG-CTTTG-GC TCATTCCGCCCTAAC Shew185_2343 2799433 - 2798276 - | cupin 4 family protein TERM 3225 2798519 - 2798505 - G 71 -4.9 -4.49352 | ATATCAAAATACAAA CAGCG CAGCC CGCCG AGGCGAATAAGCGGC TERM 3226 2799350 - 2799370 + g 91 -7.5 -5.252 | overlap 2799351 TTGAAAATGCTTGAA TCCTTGGCG GAT CACCAAGGG TTTTTTCTGCCAATA TERM 3227 2799351 - 2799369 + g 71 -8.8 -3.74397 | overlap 2799350 TGAAAATGCTTGAAT CCTTGGCG GAT CACCAAGG GTTTTTTCTGCCAAT TERM 3228 2799941 - 2799955 + G 75 -5.7 -4.65895 | GTTGCCCACAATGCG GCGTT CGATC AACGC TTTTTAGATGCGGAG Shew185_2344 2799653 - 2800279 + | DNA polymerase III, epsilon subunit TERM 3229 2800349 - 2800301 - T 82 -10.6 -3.56366 | gap 1, opp_overlap 2800313, overlap 2800313 AACAACGCCGCTAAA TGATAGTAAAAAGCCGATATATC CTAG GAT-TATCGGCTTTGTTCCATCA GCTTAGTTTCAACAG TERM 3230 2800313 - 2800337 + T 77 -8 -4.20783 | gap 1, opp_overlap 2800301 2800313 AAATGATAGTAAAAA GCCGATATATC CTAG GAT-TATCGGC TTTGTTCCATCAGCT TERM 3231 2800337 - 2800313 - T 86 -8 -4.85177 | gap 1, opp_overlap 2800313, overlap 2800301 AAATGATAGTAAAAA GCCGATATATC CTAG GAT-TATCGGC TTTGTTCCATCAGCT Shew185_2345 2801457 - 2800402 - | alanine racemase Shew185_2346 2802291 - 2801563 - | hypothetical protein TERM 3232 2803454 - 2803436 - g 77 -3 -5.24129 | opp_overlap 2803437, overlap 2803437 TGTTTGCACAAAAAA TTGGCGAC ATG GTCGGCCA TTTACAGCCTTTAGG Shew185_2347 2802649 - 2804286 + | methyl-accepting chemotaxis sensory transducer TERM 3233 2804321 - 2804338 + F 100 -14.1 -4.90778 | ATAACTTGTCGACTG GGGCGCC ATAG GGCGCCC TTTTCTTTGGGTAAA Shew185_2348 2804495 - 2804890 + | amino acid-binding ACT domain-containing protein Shew185_2349 2804904 - 2805176 + | phosphotransferase system, phosphocarrier protein HPr Shew185_2350 2805380 - 2807083 + | phosphoenolpyruvate-protein phosphotransferase TERM 3234 2807501 - 2807512 + G 75 -5.8 -4.55491 | opp_overlap 2807500 2807501 GCCAAGAAGTGAAAG TCGG CGAT CCGA TTTTGTCCTTCGATA Shew185_2351 2807155 - 2807664 + | glucose-specific PTS system component TERM 3235 2807709 - 2807746 + T 100 -17.3 -2.60496 | opp_overlap 2807710 2807715, overlap 2807715 GTTGTGTTTTGAATA ATAAAAGGCTGACTCAT AATC ATGAGTCAGCCTTTTAA GTGTTTGAAAACCGA TERM 3236 2807745 - 2807710 - T 100 -20.8 -3.61398 | opp_overlap 2807709 2807715, overlap 2807715 TTGTGTTTTGAATAA TAAAAGGCTGACTCAT AATC ATGAGTCAGCCTTTTA AGTGTTTGAAAACCG TERM 3237 2807715 - 2807740 + T 100 -16.3 -4.323 | opp_overlap 2807715 2807710, overlap 2807709 TTTTGAATAATAAAA GGCTGACTCAT AATC ATGAGTCAGCC TTTTAAGTGTTTGAA TERM 3238 2807740 - 2807715 - T 100 -16.3 -4.89477 | opp_overlap 2807709 2807715, overlap 2807710 TTTTGAATAATAAAA GGCTGACTCAT AATC ATGAGTCAGCC TTTTAAGTGTTTGAA Shew185_2352 2809275 - 2807893 - | major facilitator transporter TERM 3239 2808502 - 2808519 + g 77 -2.6 -5.19212 | overlap 2808503 GGCGACAATTTGCTT ACGGCT CACGAC AGCCGC TTTTTTCGTGCTCGT TERM 3240 2809173 - 2809158 - G 74 -6.8 -4.38141 | overlap 2809155 2809159 2809168 TCTCATATAAAATAA CGGCCA AAAA TGGCCA TACCATGTAATAACT TERM 3241 2810033 - 2810006 - H 90 -9.9 -4.47307 | AAATTAAGAGGAAAA GTCGGCAATTG AGATGA CAACCGCCGAC CTGAATGGCCTCTAA TERM 3242 2810412 - 2810396 - H 89 -9.5 -4.17657 | opp_overlap 2810395 2810394 2810388 2810384 CATTAGAGCGGAAAA CTTAAGC GAC GCTTAAG CCTTTAGCCTATTTT Shew185_2353 2810518 - 2810976 + | arsenate reductase and related TERM 3243 2811204 - 2811232 + G 80 -8.7 -4.37092 | opp_overlap 2811204 GATGTTGTGCCAACA GGTGATGTGAGCC GCT GGCACACGCCGCC TTTTGTGCCCACCAT Shew185_2354 2810973 - 2812115 + | succinyl-diaminopimelate desuccinylase TERM 3244 2812261 - 2812231 - g 79 -11.8 -3.17075 | overlap 2812233 TTGGCTCGAAGCGAA CACCGCCATCGCCT TTA ATGCGATGGCGGAA AAAGCCAAAGATGCG TERM 3245 2812259 - 2812233 - g 100 -16.6 -3.14878 | overlap 2812231 GGCTCGAAGCGAACA CCGCCATCGCCT TTA ATGCGATGGCGG AAAAAGCCAAAGATG Shew185_2355 2812109 - 2812822 + | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin Shew185_2356 2812933 - 2813763 + | alpha/beta hydrolase fold TERM 3246 2813837 - 2813806 - f 70 -5.9 -4.41348 | opp_overlap 2813826 CTGTTGCGAAATAAA TCTTCAAGGTGTG GGCATG CGCATCTTGAAGA TAGCTATTCGGCTTA TERM 3247 2814484 - 2814495 + G 76 -7.2 -4.32951 | overlap 2814483 2814482 ATCATTGGATCACCC CGCC CCGC GGCG TTTATTCGTTGCCGT Shew185_2357 2814096 - 2815274 + | topoisomerase IV, subunit B Shew185_2358 2815285 - 2815722 + | hypothetical protein TERM 3248 2815738 - 2815768 + T 82 -8.3 -4.20932 | opp_overlap 2815734 2815731, overlap 2815739 CCCATACAGCATCAT CCTTGTCCGCC TAAATCTCT GGCGGACAAGA TTTTCACTCAGTATT TERM 3249 2815739 - 2815767 + T 83 -11.8 -3.11836 | opp_overlap 2815734 2815731, overlap 2815738 CCATACAGCATCATC CTTGTCCGCC TAAATCTCT GGCGGACAAG ATTTTCACTCAGTAT TERM 3250 2815871 - 2815891 + T 83 -11.1 -3.75629 | opp_overlap 2815871 2815872, overlap 2815872 ACTATTAGTAAAGAA TCCGCCTTC TTA GAAGGCGGC TTTGACTTGCCCCTG TERM 3251 2815891 - 2815871 - T 88 -11.1 -4.03141 | opp_overlap 2815871 2815872, overlap 2815872 ACTATTAGTAAAGAA TCCGCCTTC TTA GAAGGCGGC TTTGACTTGCCCCTG TERM 3252 2815890 - 2815872 - T 100 -14.6 -3.01162 | opp_overlap 2815872 2815871, overlap 2815871 CTATTAGTAAAGAAT CCGCCTTC TTA GAAGGCGG CTTTGACTTGCCCCT TERM 3253 2815872 - 2815890 + T 95 -14.6 -2.85056 | opp_overlap 2815871 2815872, overlap 2815871 CTATTAGTAAAGAAT CCGCCTTC TTA GAAGGCGG CTTTGACTTGCCCCT TERM 3254 2815900 - 2815914 + T 81 -11.4 -3.02144 | AGGCGGCTTTGACTT GCCCCT GGA AGGGGC TATTCCAAAAACTAC Shew185_2359 2816363 - 2815926 - | transposase IS200-family protein TERM 3255 2816472 - 2816443 - H 85 -11.5 -3.35371 | gap 1, opp_overlap 2816449, overlap 2816446 2816449 TATAGCCTCAAGGAA CAATCACCACCGCC AGA GGCGGTGGTT-TTG GGATGACAATAAAAA TERM 3256 2816470 - 2816446 - H 83 -9.9 -3.81414 | opp_overlap 2816449, overlap 2816443 2816449 AGCCTCAAGGAACAA TCACCACCGCC AGA GGCGGTGGTTT TGGGATGACAATAAA TERM 3257 2816467 - 2816449 - H 100 -16 -2.98947 | opp_overlap 2816449, overlap 2816446 2816443 CTCAAGGAACAATCA CCACCGCC AGA GGCGGTGG TTTTGGGATGACAAT TERM 3258 2816449 - 2816467 + H 100 -16 -4.13945 | opp_overlap 2816446 2816443 2816449 CTCAAGGAACAATCA CCACCGCC AGA GGCGGTGG TTTTGGGATGACAAT TERM 3259 2816535 - 2816556 + H 72 -9.5 -2.93348 | opp_overlap 2816535, overlap 2816528 CCTTAATTGGATAGA CCAGCAGAA ACAA TTTTGCTGG TATACTCTTGCTAAA TERM 3260 2816695 - 2816709 + G 80 -2.8 -5.41746 | GGCCGGACGTATACG TCAAGA AAA TCCTGA TTTTTTTGAGCAATT Shew185_2360 2816639 - 2817256 + | carbonate dehydratase TERM 3261 2817306 - 2817334 + F 81 -6.9 -4.66163 | gap 1, opp_overlap 2817313, overlap 2817313 TGCCATCTATGCTCA GATAAAACCTGC CCCTGT GCAGGTTTT-TC TTTTTCCATGGCAAT TERM 3262 2817313 - 2817328 + F 95 -6.1 -5.63236 | opp_overlap 2817313, overlap 2817306 TATGCTCAGATAAAA CCTGC CCCTGT GCAGG TTTTTCTTTTTCCAT TERM 3263 2817328 - 2817313 - f 77 -6.1 -4.53303 | opp_overlap 2817306 2817313 TATGCTCAGATAAAA CCTGC CCCTGT GCAGG TTTTTCTTTTTCCAT TERM 3264 2818028 - 2818010 - g 77 -8.8 -4.19817 | TCGATTCAGTCAAAA CCATCACC TGT GGTGAAGG TGGCGCTGTGATCAC Shew185_2361 2817451 - 2818641 + | glutamine--scyllo-inositol transaminase Shew185_2362 2818662 - 2819732 + | iron-containing alcohol dehydrogenase TERM 3265 2819747 - 2819774 + F 93 -13.6 -3.03453 | opp_overlap 2819752, overlap 2819752 AGCTCTAACACATGT TAAAAGGGCTCA ATTG TGAGCCCTTTTG TCTATATGCATTGTA TERM 3266 2819752 - 2819769 + F 93 -11.3 -4.64844 | opp_overlap 2819752, overlap 2819747 TAACACATGTTAAAA GGGCTCA ATTG TGAGCCC TTTTGTCTATATGCA TERM 3267 2819769 - 2819752 - f 93 -11.3 -4.19472 | opp_overlap 2819747 2819752 TAACACATGTTAAAA GGGCTCA ATTG TGAGCCC TTTTGTCTATATGCA Shew185_2363 2819830 - 2820567 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 3268 2820763 - 2820736 - g 77 -8.4 -4.16259 | overlap 2820737 AGATAAGCAGATAAA GCCTACTGCCGA GCCT TCGGCAGCAGAG AATGACGCAGATGAT TERM 3269 2820762 - 2820737 - g 78 -11.9 -3.08671 | overlap 2820736 GATAAGCAGATAAAG CCTACTGCCGA GCCT TCGGCAGCAGA GAATGACGCAGATGA Shew185_2364 2820602 - 2820844 + | hypothetical protein TERM 3270 2820942 - 2820970 + T 75 -10.4 -3.17622 | opp_overlap 2820944 2820949, overlap 2820949 TGATGTTAGCAAACA TAGAAAAGGCGC CATAA GCGCCTTTTTTG TCTCTTATACCAATC TERM 3271 2820968 - 2820944 - T 72 -9.3 -3.29972 | opp_overlap 2820942 2820949, overlap 2820949 ATGTTAGCAAACATA GAAAAGGCGCC ATA AGCGCCTTTTT TGTCTCTTATACCAA TERM 3272 2820963 - 2820949 - T 89 -9.2 -4.74917 | opp_overlap 2820949 2820942, overlap 2820944 AGCAAACATAGAAAA GGCGCC ATA AGCGCC TTTTTTGTCTCTTAT TERM 3273 2820949 - 2820963 + T 95 -8.5 -5.48787 | opp_overlap 2820944 2820949, overlap 2820942 AGCAAACATAGAAAA GGCGC CATAA GCGCC TTTTTTGTCTCTTAT Shew185_2365 2821485 - 2821012 - | hypothetical protein TERM 3274 2821690 - 2821670 - R 100 -12.6 -5.61596 | ATCGGCATAAAAAAA TGGCCCGA ACGAA TCGGGCCA TAGTGCAAACCATAT Shew185_2366 2822803 - 2821799 - | hypothetical protein TERM 3275 2821846 - 2821858 + g 79 -3.3 -5.24129 | overlap 2821832 2821831 TCTCGGCGGCGAGTC GACGC TGC GCTTC TTTTTTCTCGCGGCG Shew185_2367 2823179 - 2823835 + | glutathione S-transferase domain-containing protein Shew185_2368 2824032 - 2824229 + | hypothetical protein TERM 3276 2824350 - 2824372 + T 82 -8.5 -4.2558 | gap 1, opp_overlap 2824350 TAAACAAGCAAAAAA TAGCGCAAGC TTAG GCT-GCGCTA TTTTAATGACCCCTC TERM 3277 2824372 - 2824350 - T 95 -8.5 -5.4148 | gap 1, opp_overlap 2824350 TAAACAAGCAAAAAA TAGCGCAAGC TTAG GCT-GCGCTA TTTTAATGACCCCTC Shew185_2369 2826176 - 2824419 - | sulphate transporter TERM 3278 2824626 - 2824638 + g 71 -4.8 -4.59853 | opp_overlap 2824626 CCCCGCAAGCACTAA GCGT ACTCC ACGC TTTTTCAGCAATTGA Shew185_2370 2827023 - 2826361 - | lysine exporter protein LysE/YggA TERM 3279 2827847 - 2827827 - g 73 -3.2 -4.87665 | TCGCAGCGACAAAAA CTCCTCGA ATTGG CCGAGCAG TATCAGTTTTATATC Shew185_2371 2827080 - 2828438 + | GntR family transcriptional regulator TERM 3280 2828567 - 2828540 - T 100 -15.6 -4.96762 | TATAGAGCATAAAAA GCGCCAGTAGCA TGTA TGCTGCTGGCGC TGAGGTAACTGACAA Shew185_2372 2830499 - 2828625 - | alkaline phosphatase TERM 3281 2830061 - 2830075 + g 70 -10 -3.21747 | opp_overlap 2830057 ATGCTAACGGATCAG CGGCAT TGG ATGCCG TTGCTAATAAACTGC TERM 3282 2831782 - 2831795 + G 83 -4.5 -5.2197 | opp_overlap 2831775, overlap 2831775 CTAAACATTGCCAGC GGCGT GTTA ACGTC TTTTTCATTTTTCTG Shew185_2373 2831095 - 2832318 + | Bcr/CflA subfamily drug resistance transporter TERM 3283 2832495 - 2832523 + F 80 -11.1 -3.36256 | opp_overlap 2832495 2832501, overlap 2832501 ATCTAACCTCCAACA CCAAAACGGTACT TTT AGTGCCGTTTTTG CTTTTTAAGCATCTA TERM 3284 2832517 - 2832501 - f 74 -6.5 -4.4261 | opp_overlap 2832495 2832501, overlap 2832495 CCTCCAACACCAAAA CGGTACT TTT AGTGCCG TTTTTGCTTTTTAAG TERM 3285 2832501 - 2832517 + F 93 -8.7 -5.18355 | opp_overlap 2832501 2832495, overlap 2832495 CCTCCAACACCAAAA CGGTACT TTT AGTGCCG TTTTTGCTTTTTAAG TERM 3286 2833021 - 2833003 - g 70 -9.6 -3.11072 | GGTATTGAACACATA CTCGTTCG CCA CGAACAAG CCGCCGTACACATGG Shew185_2374 2832865 - 2834583 + | acetolactate synthase 3 catalytic subunit Shew185_2375 2834583 - 2835077 + | acetolactate synthase 3 regulatory subunit TERM 3287 2835154 - 2835124 - T 100 -12.6 -5.01535 | opp_overlap 2835127, overlap 2835126 2835127 GCATAAGCACAAAAA CATCAAGGGGAGCA TAA TGCTCCCCTTGTTT TTTAAGCGATTATCA TERM 3288 2835152 - 2835126 - T 100 -15.2 -4.12226 | opp_overlap 2835127, overlap 2835124 2835127 ATAAGCACAAAAACA TCAAGGGGAGCA TAA TGCTCCCCTTGT TTTTTAAGCGATTAT TERM 3289 2835151 - 2835127 - T 100 -18.7 -3.05709 | opp_overlap 2835127, overlap 2835126 2835124 TAAGCACAAAAACAT CAAGGGGAGCA TAA TGCTCCCCTTG TTTTTTAAGCGATTA TERM 3290 2835127 - 2835151 + T 100 -18.7 -5.03145 | opp_overlap 2835127 2835126 2835124 TAAGCACAAAAACAT CAAGGGGAGCA TAA TGCTCCCCTTG TTTTTTAAGCGATTA Shew185_2376 2835622 - 2835179 - | heat shock protein Hsp20 TERM 3291 2835469 - 2835485 + g 73 -8.1 -4.08945 | ATCCGGCTACGGCCA TCGTTAT GCG ATAACGA TTTTCGCCGAGTAAT TERM 3292 2835970 - 2835942 - R 100 -15.5 -3.08966 | opp_overlap 2835949, overlap 2835949 CTAAATTGCAGCCAA TAAAAAAGGAGCC TAG GGCTCCTTTTTCA GTCTTAGCATCGAAT TERM 3293 2835949 - 2835963 + r 95 -11.4 -4.74706 | opp_overlap 2835949 2835942 GCAGCCAATAAAAAA GGAGCC TAG GGCTCC TTTTTCAGTCTTAGC TERM 3294 2835963 - 2835949 - R 100 -11.4 -5.4833 | opp_overlap 2835949, overlap 2835942 GCAGCCAATAAAAAA GGAGCC TAG GGCTCC TTTTTCAGTCTTAGC Shew185_2377 2836416 - 2835985 - | nucleoside-diphosphate kinase Shew185_2378 2836782 - 2836615 - | hypothetical protein TERM 3295 2836835 - 2836812 - R 73 -6.8 -4.30987 | AGTTGCGATAACAAA GTTAAGCCAT TTAA ATGCCTTAAC CAATATACAACAAGG TERM 3296 2836991 - 2836979 - R 70 -3.3 -4.96848 | opp_overlap 2836979 TGCCTCACATAAAAA GCCGT ATC ACCGC TGTGCTCACTACTTT Shew185_2379 2837197 - 2837000 - | hypothetical protein Shew185_2380 2838216 - 2837311 - | alpha-L-glutamate ligase TERM 3297 2838351 - 2838335 - R 100 -8 -5.54079 | opp_overlap 2838335 GCAAAAAGCAAAAAA CCAGTC ACGTG GACTGG TTTTAACAATTATCG TERM 3298 2838335 - 2838351 + r 77 -8 -4.1585 | opp_overlap 2838335 GCAAAAAGCAAAAAA CCAGTC ACGTG GACTGG TTTTAACAATTATCG Shew185_2381 2838713 - 2838375 - | ferredoxin, 2Fe-2S type, ISC system Shew185_2382 2840584 - 2838722 - | chaperone protein HscA TERM 3299 2840630 - 2840603 - R 82 -11.4 -3.22388 | TATCCAACTTAGTAA TGCCAACTCAAG CGTG CTTGAGTCAGCA AAGTAACATAAACAC Shew185_2383 2841176 - 2840652 - | co-chaperone HscB Shew185_2384 2841516 - 2841193 - | iron-sulfur cluster assembly protein IscA Shew185_2385 2841914 - 2841531 - | scaffold protein TERM 3300 2841879 - 2841859 - G 83 -9.7 -4.25104 | opp_overlap 2841862, overlap 2841862 TCGTTTTTATCAAAA GAACCAACG TTA CGTGGGTTC TCATAATGATCTATC Shew185_2386 2843166 - 2841952 - | cysteine desulfurase IscS Shew185_2387 2843708 - 2843247 - | BadM/Rrf2 family transcriptional regulator TERM 3301 2843804 - 2843788 - R 90 -9.5 -4.34771 | TAAAACCTACTAAAA CACTCAA GTA TTGAGTG TGCACATAACCAATA Shew185_2388 2844867 - 2844046 - | serine O-acetyltransferase TERM 3302 2844806 - 2844796 - G 71 -8.2 -3.67918 | overlap 2844797 AACCAAGATCTCAAA CGCG CTG CGCG CCGCAGGATCACGGT Shew185_2389 2845650 - 2844922 - | RNA methyltransferase Shew185_2390 2845804 - 2846607 + | inositol-phosphate phosphatase TERM 3303 2846758 - 2846722 - T 95 -8.9 -5.4251 | gap 3, opp_overlap 2846722 GTTAGACATAAAAAA GGCCAGTG-GCTGTCTCT TCTA AGAG-C-GCTCACTGGCC TTTTTGTTTATGTGG TERM 3304 2846722 - 2846758 + T 100 -10.2 -5.42975 | gap 1, opp_overlap 2846722 GTTAGACATAAAAAA GGCCAGTGGCTGTCTCT TCTA AGAG-CGCTCACTGGCC TTTTTGTTTATGTGG Shew185_2391 2848209 - 2846959 - | LolC/E family lipoprotein releasing system, transmembrane protein TERM 3305 2847933 - 2847923 - G 80 -8.2 -4.38712 | TGCATGCGGATAAAA GGCG CCG CGCC GCGAATACCTTCAAT Shew185_2392 2848901 - 2848206 - | lipoprotein releasing system, ATP-binding protein TERM 3306 2848329 - 2848308 - G 71 -7.2 -3.99324 | GGTCACCACCACAAA CGCCGTAC CCAGTT GTTCGGCG AGTTCGCGGATCAAC Shew185_2393 2850261 - 2849029 - | LolC/E family lipoprotein releasing system, transmembrane protein TERM 3307 2849343 - 2849354 + g 72 -5.8 -4.36914 | GAGTTTTGAGCACCG CCAC ATCT GTGG TTTTATCGACCACCA TERM 3308 2850175 - 2850162 - G 83 -3.8 -5.43866 | CAACGCCTAAAAAAA TGCC CGAAAC GGCA AATAGAGTAATGAAC TERM 3309 2850194 - 2850207 + g 74 -6.7 -4.36914 | opp_overlap 2850187 2850190 2850193, overlap 2850187 2850190 AGAGTAATGAACGAC GCGAA CGCG TTCGC TTTTCTGGCCCGCCA TERM 3310 2850818 - 2850801 - g 77 -4.1 -5.02074 | CTACCGCGCAAAAAA TGCTATC TGCC GAGAGCA GCGCCAATCGAGATA Shew185_2394 2850356 - 2851027 + | hypothetical protein TERM 3311 2851018 - 2851004 - f 70 -7.8 -3.68619 | CTCAAGTTACGTAAA CTCGCC AGA GACGAG CGTCAATAGCCGCTG TERM 3312 2853121 - 2853099 - g 76 -9.1 -3.91488 | opp_overlap 2853099 2853098 AACGCCGGTAAACAA GTGGTCGTG CTGGT CCCGACCAC ATTGCTTGCCCAGCA Shew185_2395 2851113 - 2854601 + | transcription-repair coupling factor Shew185_2396 2854601 - 2855602 + | hypothetical protein Shew185_2397 2856001 - 2855726 - | acylphosphatase TERM 3313 2856158 - 2856134 - H 100 -5.8 -5.81412 | opp_overlap 2856136 TTTAGGCAAAAAAAA CAGCTAAC AAGACTGCA GTTAGCTG TGTCGGGCGACATAC TERM 3314 2856397 - 2856373 - H 79 -3.5 -5.47218 | overlap 2856375 GTTCATTTAAAAAAA CACCCCTGTGA AAA TCGCAGAAGTA TGAGGACACGTTGAC TERM 3315 2856604 - 2856632 + G 75 -6 -4.63932 | opp_overlap 2856610, overlap 2856610 TCAAAAGACAAAAGC AAAAAACCGGCA TAGTC TGCCGGTTTCTG TTTTATTGCGCGATA TERM 3316 2856626 - 2856610 - g 100 -9.4 -5.50313 | opp_overlap 2856604 2856610 GACAAAAGCAAAAAA CCGGCA TAGTC TGCCGG TTTCTGTTTTATTGC TERM 3317 2856610 - 2856626 + G 90 -9.4 -4.56159 | opp_overlap 2856610, overlap 2856604 GACAAAAGCAAAAAA CCGGCA TAGTC TGCCGG TTTCTGTTTTATTGC Shew185_2398 2856408 - 2856653 + | hypothetical protein Shew185_2399 2858369 - 2856669 - | hypothetical protein TERM 3318 2857043 - 2857059 + g 70 -2.1 -4.88388 | opp_overlap 2857030 CACGCAGTAAATACG CGCCATG TAA CTTAGCG TTTTTATAAAATTCT TERM 3319 2858214 - 2858226 + g 77 -4.8 -4.84311 | ATAAAATAGCTGCAC TGGC CACTC GCCA TTTTGTTCTGTCGGC Shew185_2400 2860659 - 2858380 - | hypothetical protein Shew185_2402 2860950 - 2862191 + | hypothetical protein Shew185_2403 2862628 - 2863653 + | hypothetical protein TERM 3320 2863874 - 2863847 - T 83 -12.6 -2.65264 | TGATTAGCGAGACGA CCGTCCGCCCCA TGGA CGGGGCGGTCGA GCATCCACGGACGGA Shew185_2404 2864778 - 2864239 - | hypothetical protein TERM 3321 2864609 - 2864567 - G 93 -14.9 -3.61398 | gap 1, opp_overlap 2864563 2864567 2864605 CGCTCGGCCCAATAA GCGCCGAGTCCCACGCCG ACCATTAA CGGCGCGGGA-TCGTCGC TATGCTTCATTTGCT TERM 3322 2864567 - 2864609 + g 83 -12.7 -2.99998 | gap 1, opp_overlap 2864567, overlap 2864563 2864605 CGCTCGGCCCAATAA GCGCCGAGTCCCACGCCG ACCATTAA CGGCGCGGGA-TCGTCGC TATGCTTCATTTGCT Shew185_2405 2865886 - 2864858 - | beta-hexosaminidase TERM 3323 2865821 - 2865804 - G 75 -7.7 -4.13911 | GAAAATAGAATTAAA CCACCCA CCTG TGGATGG CGTAGCATCTCAGAT TERM 3324 2866525 - 2866501 - g 78 -9.3 -3.9777 | opp_overlap 2866500 GTGAAGATCCAGAAA CCGTAGACACT GAC AGTATCGACGG CATTTTAGAGCACGT TERM 3325 2867620 - 2867608 - g 100 -10.5 -4.73432 | opp_overlap 2867617, overlap 2867616 2867617 GCAAATACAAAGAAA CCGCC AAA GGCGG CCTAGCAGTCAACAT Shew185_2406 2866272 - 2867648 + | L-serine dehydratase 1 TERM 3326 2867701 - 2867725 + T 100 -18.7 -5.28942 | opp_overlap 2867701 CTGCATCATAAAAAA TGCCGCAACTC ACT GAGTTGCGGCA TTTTTGTTTGAGCTC TERM 3327 2867725 - 2867701 - T 100 -18.7 -5.31275 | opp_overlap 2867701 CTGCATCATAAAAAA TGCCGCAACTC ACT GAGTTGCGGCA TTTTTGTTTGAGCTC Shew185_2407 2868609 - 2867767 - | S-formylglutathione hydrolase TERM 3328 2868182 - 2868146 - G 70 -7.9 -3.84514 | overlap 2868141 AGGCCAATCACCAAA GCACCATGGCCGCCCAT CGA ATGGCCAGAGATGGCGC GCTGGGTAGTCACCG TERM 3329 2868230 - 2868248 + g 72 -6 -4.4648 | opp_overlap 2868230 2868242 AAGGCTGGCAACTCA TGGACGAT GTA ATCGTACA TTTTGTAATGACGAT TERM 3330 2868738 - 2868711 - R 72 -9.9 -3.05844 | opp_overlap 2868711 2868710, overlap 2868713 CTGCTCAGTGCAACA CAGCAGACAGA TTGTCC CCTGTCTGCCG GTTTGTCACATCAAG Shew185_2408 2869923 - 2868784 - | S-(hydroxymethyl)glutathione dehydrogenase Shew185_2409 2870139 - 2871017 + | LysR family transcriptional regulator Shew185_2410 2872460 - 2871171 - | FAD dependent oxidoreductase TERM 3331 2872262 - 2872276 + g 75 -5.7 -4.65916 | CGCCGTTGCGTCCAG TTGCG CCCCA CGCAA TTTTATTAGCCTCAA Shew185_2411 2872866 - 2873513 + | hypothetical protein Shew185_2412 2873867 - 2875855 + | TonB-dependent receptor TERM 3332 2875895 - 2875921 + T 100 -13.7 -4.11304 | opp_overlap 2875895 TTATCTAGGTAAAAA CGGGCTTGCGA AACTC TCGCCAGCCCG TTGTTTATGAATTCG TERM 3333 2875921 - 2875895 - T 100 -14.4 -4.67353 | opp_overlap 2875895 TTATCTAGGTAAAAA CGGGCTTGCGAA ACT CTCGCCAGCCCG TTGTTTATGAATTCG Shew185_2413 2878019 - 2876010 - | helicase c2 TERM 3334 2876631 - 2876621 - G 73 -8.2 -3.87627 | TCGGCACACAAAATA CCGC TTG GCGG GGATAATCGAAGGGA TERM 3335 2877328 - 2877316 - G 73 -3.4 -4.85782 | opp_overlap 2877316, overlap 2877318 TCGGCGAAAAATAAA TGGT GGTTA ACCA CAATAATTTTGGCAT TERM 3336 2877689 - 2877678 - G 75 -5.8 -4.61482 | opp_overlap 2877677 2877678 GTCTTTAAAAAACAA CTGC TCTT GCAG ATTTTTACTGCCGGT Shew185_2414 2878487 - 2879467 + | hypothetical protein TERM 3337 2879633 - 2879623 - g 73 -5.4 -4.58283 | TAACCTCTGTAAAAA TACC CTT GGTA AATGCGACTTAGGTG Shew185_2415 2879600 - 2879860 + | hypothetical protein Shew185_2416 2879946 - 2880371 + | GCN5-related N-acetyltransferase Shew185_2417 2880421 - 2880861 + | hypothetical protein TERM 3338 2881721 - 2881700 - f 86 -10.1 -4.01853 | opp_overlap 2881700 CAAGATGATCATAAA CCCCTGGAA GGAA TTCCGGGGG TTTTTTGCATTTAGG TERM 3339 2881700 - 2881721 + F 100 -12.3 -5.22039 | opp_overlap 2881700 CAAGATGATCATAAA CCCCTGGAA GGAA TTCCGGGGG TTTTTTGCATTTAGG Shew185_2418 2881918 - 2882817 + | ATP phosphoribosyltransferase TERM 3340 2883855 - 2883867 + G 73 -5.5 -4.60255 | overlap 2883835 GAAAAACATTCGCGC CGCTG GCT CAGTG TTTTTAGGCGCTTAT Shew185_2419 2882821 - 2884122 + | histidinol dehydrogenase TERM 3341 2885206 - 2885226 + G 73 -9.7 -3.28791 | opp_overlap 2885221 TCGCCAAGGTCGCAG CGTTACTGC AAG GCAGTGGCG TTGTCGCCCGCGCCT Shew185_2420 2884167 - 2885366 + | histidinol-phosphate aminotransferase Shew185_2421 2885468 - 2886559 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase TERM 3342 2887286 - 2887267 - g 77 -4.2 -5.03314 | gap 1, opp_overlap 2887267 2887282, overlap 2887230 2887268 TCCACCCCGAAAAAA GTGC-CGCC GTG GGCGCGCAA ATTCTGCGTAACTTT TERM 3343 2887363 - 2887347 - g 75 -7.9 -4.24342 | opp_overlap 2887349, overlap 2887332 2887357 2887358 2887360 GCTCTGATGAACAAA GCGCTGC AAA GCAGCTC TGCTGATGGCCAAGC Shew185_2422 2886591 - 2887403 + | imidazole glycerol phosphate synthase subunit HisH TERM 3344 2888015 - 2888029 + G 73 -8.5 -3.86822 | ACGGCACCTTAACGG GCGCG AATAC CGCGC TTTATCAAGAAATTG Shew185_2423 2887474 - 2888211 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Shew185_2424 2888193 - 2888966 + | imidazole glycerol phosphate synthase subunit HisF TERM 3345 2889257 - 2889268 + G 75 -5.8 -4.57569 | opp_overlap 2889257, overlap 2889247 AAAACCTTGAGCACA GGTG ATGT CACC TTTTTCAGCCGCTCA Shew185_2425 2889101 - 2889742 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 3346 2889817 - 2889789 - f 100 -18.3 -3.95073 | opp_overlap 2889789 GCTTACATCTAGAAA TGCCGCAAACTTG AGC CAAGTCTGCGGCA TTTTTTATCGCGCGA TERM 3347 2889789 - 2889817 + F 100 -16.1 -5.24129 | opp_overlap 2889789 GCTTACATCTAGAAA TGCCGCAAACTTG AGC CAAGTCTGCGGCA TTTTTTATCGCGCGA Shew185_2426 2890353 - 2891540 + | aromatic amino acid transporter TERM 3348 2891844 - 2891819 - f 70 -2.5 -5.02074 | overlap 2891820 TCAGTTGCTAAAAAA GTACCTCAGCA AAAA TGCCGATGTAA AGCACGTGTGAATGT TERM 3349 2892491 - 2892477 - g 70 -10 -3.1876 | opp_overlap 2892474, overlap 2892464 2892480 AATGCCATCGATGAA CAAGGC CCC GCCTTG GCCTTAGATATCAAA TERM 3350 2894033 - 2894014 - g 90 -9.4 -4.55721 | AAAGTGCAGATAAAA GTTCTGAT AAAA ATCAGAAC ACGAGCATCACAACT Shew185_2427 2891925 - 2895389 + | hypothetical protein Shew185_2428 2895403 - 2895621 + | hypothetical protein Shew185_2429 2895646 - 2895981 + | hypothetical protein TERM 3351 2896031 - 2896060 + T 100 -19.5 -3.20747 | opp_overlap 2896031 2896037, overlap 2896037 GCGACTAGAAATAAA CAAAAACGCCTGC AATA GCAGGCGTTTTTG TTGATGGAGTTTGAT TERM 3352 2896060 - 2896031 - T 100 -19.5 -4.59342 | opp_overlap 2896031 2896037, overlap 2896037 GCGACTAGAAATAAA CAAAAACGCCTGC AATA GCAGGCGTTTTTG TTGATGGAGTTTGAT TERM 3353 2896054 - 2896037 - T 100 -12.7 -5.56573 | opp_overlap 2896037 2896031, overlap 2896031 AGAAATAAACAAAAA CGCCTGC AATA GCAGGCG TTTTTGTTGATGGAG TERM 3354 2896037 - 2896054 + T 100 -12.7 -5.1356 | opp_overlap 2896031 2896037, overlap 2896031 AGAAATAAACAAAAA CGCCTGC AATA GCAGGCG TTTTTGTTGATGGAG TERM 3355 2896404 - 2896369 - T 71 -6.2 -4.28432 | gap 1, opp_overlap 2896372 2896374 2896376, overlap 2896370 AATTTGAACTGAAAA CGCCACACG-TTGACAG TCT CTCTCAAGCGTGTGTCA TCTACGTAACTAAAT Shew185_2430 2896860 - 2896414 - | GCN5-related N-acetyltransferase Shew185_2431 2898136 - 2897603 - | hypothetical protein Shew185_2432 2899356 - 2898337 - | dihydroorotate dehydrogenase 2 TERM 3356 2899380 - 2899399 + r 83 -10.6 -3.63276 | opp_overlap 2899380, overlap 2899374 CTCGACCTAAAAAAA GCCCCGGC GATC GCCAGGGC TTCTGATTGTTATAA TERM 3357 2899399 - 2899380 - R 100 -12.8 -5.47218 | opp_overlap 2899380 2899374 CTCGACCTAAAAAAA GCCCCGGC GATC GCCAGGGC TTCTGATTGTTATAA Shew185_2433 2904264 - 2899420 - | NAD-glutamate dehydrogenase TERM 3358 2902750 - 2902768 + g 71 -8.2 -3.65812 | overlap 2902745 TTCACCGAGTGCACT GTTAAGCG CAG TGCTTAAC TTATCTTCCCACGAA TERM 3359 2904522 - 2904496 - R 100 -19.6 -4.7078 | opp_overlap 2904500, overlap 2904500 CTAAGTATTCAAAAA CAAATGGGGAGC TAA GCTCCCCATTTG TAGACCCTACTTAGG TERM 3360 2904518 - 2904500 - R 100 -14.6 -4.89063 | opp_overlap 2904500, overlap 2904496 GTATTCAAAAACAAA TGGGGAGC TAA GCTCCCCA TTTGTAGACCCTACT TERM 3361 2904500 - 2904518 + r 100 -14.6 -3.87075 | opp_overlap 2904496 2904500 GTATTCAAAAACAAA TGGGGAGC TAA GCTCCCCA TTTGTAGACCCTACT Shew185_2434 2906844 - 2904529 - | hypothetical protein TERM 3362 2906646 - 2906664 + g 77 -10.4 -3.61654 | TGATGCTGTTGGCGC CACCAAAA TCT TTTTGGTG TTTCAGGTAGGTCTG TERM 3363 2906907 - 2906895 - R 86 -9.1 -4.44667 | TGGCTTAAGAATAAA CAGCC CTT GGCTG CCGGATAACCACATA Shew185_2435 2907893 - 2906877 - | BNR repeat-containing protein TERM 3364 2907609 - 2907623 + g 71 -7 -4.05446 | GGTCGCATCATGGCC CACGGC CCA GCCGAG TTTGTCATTAAGGAA TERM 3365 2907935 - 2907913 - R 74 -9 -3.51411 | opp_overlap 2907916 2907927, overlap 2907909 2907916 ACTTCCTTAAACTAA TGAGGGGCGC AGA GCGCCCCTTT ATTTGTGGCGTATTA TERM 3366 2907932 - 2907916 - R 95 -15.1 -2.89569 | opp_overlap 2907916 2907927, overlap 2907913 2907909 TCCTTAAACTAATGA GGGGCGC AGA GCGCCCC TTTATTTGTGGCGTA TERM 3367 2907916 - 2907932 + r 100 -15.1 -4.56367 | opp_overlap 2907916 2907913 2907909, overlap 2907927 TCCTTAAACTAATGA GGGGCGC AGA GCGCCCC TTTATTTGTGGCGTA Shew185_2436 2909312 - 2907948 - | hypothetical protein Shew185_2437 2911368 - 2909326 - | hypothetical protein TERM 3368 2911340 - 2911361 + g 83 -7.5 -4.68645 | AAAGCAAGCGCCGAT TTGTTAAAA CTAT TTTTAACAA TTTTCATTTTAGCTC Shew185_2438 2911922 - 2911707 - | hypothetical protein TERM 3369 2911805 - 2911792 - G 74 -3.8 -5.00616 | TTTTCGGTTAAAAAA CGTC TGAAAT GACG GCCATTAATCCACAA TERM 3370 2911950 - 2911930 - R 91 -14 -2.80817 | overlap 2911927 2911925 AATTCCATAATATCA GGGCGGCA TCGAT TGCCGCCC TCCTCCTACAAACCG Shew185_2439 2914515 - 2911966 - | aminopeptidase N TERM 3371 2914552 - 2914566 + r 85 -8.5 -4.43681 | opp_overlap 2914552 CTAAATAAGAAAAAA CGCGC CATAA GCGCG TTTTGATATTGGATA TERM 3372 2914566 - 2914552 - R 100 -9.2 -5.72254 | opp_overlap 2914552 CTAAATAAGAAAAAA CGCGCC ATA AGCGCG TTTTGATATTGGATA Shew185_2440 2916645 - 2914600 - | carboxy-terminal protease TERM 3373 2914968 - 2914980 + g 76 -9.1 -3.85698 | TGAGCGTGCCATATT GTGCC ATT GGCAC TTTATCCCAAGGCAA Shew185_2441 2917306 - 2916674 - | putative solute/DNA competence effector Shew185_2442 2918044 - 2917586 - | putative GAF sensor protein TERM 3374 2918076 - 2918090 + r 76 -2.1 -5.40072 | gap 1 TTTATTCTGCTGCTT CGGTCT TTTT AG-CCG TTTTTTTCGCAACAG Shew185_2443 2918361 - 2918062 - | YebG family protein Shew185_2444 2918569 - 2919201 + | paraquat-inducible protein A Shew185_2445 2919203 - 2919820 + | paraquat-inducible protein A TERM 3375 2920916 - 2920906 - g 80 -4.6 -5.1244 | GCATTAATACAAAAA CGGC GAT GCCA AGCAGTTTTGCCTTA Shew185_2446 2919807 - 2922446 + | hypothetical protein TERM 3376 2922529 - 2922499 - T 90 -11.2 -4.12942 | opp_overlap 2922504, overlap 2922504 TTAAAGCTCTTAAAA GTCAATCAGGCGCA TTA TGCGCCTGATTTAT TTTTAGCTTCCCTTG TERM 3377 2922504 - 2922524 + T 100 -15.5 -4.91473 | opp_overlap 2922504 2922499 GCTCTTAAAAGTCAA TCAGGCGCA TTA TGCGCCTGA TTTATTTTTAGCTTC TERM 3378 2922524 - 2922504 - T 100 -15.5 -3.36823 | opp_overlap 2922504, overlap 2922499 GCTCTTAAAAGTCAA TCAGGCGCA TTA TGCGCCTGA TTTATTTTTAGCTTC Shew185_2447 2923814 - 2922588 - | nucleoside recognition domain-containing protein TERM 3379 2923183 - 2923162 - G 73 -2.1 -5.00895 | overlap 2923163 2923165 GTCATTAGATAAAAA CCACTCGCC ACTA GGCCAGAGA GCATCAAGGCGCCAT Shew185_2448 2923981 - 2925498 + | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 3380 2925649 - 2925677 + T 93 -5.9 -5.61596 | CGAGCCATTCCCCTA GGCCCAAACAGCT TTC ATCGTTTTGGGCC TTTTTTTATGCCAAT Shew185_2449 2926647 - 2925796 - | TatD family hydrolase Shew185_2450 2927124 - 2926798 - | type IV pilus biogenesis protein PilZ Shew185_2451 2928087 - 2927131 - | DNA polymerase III, delta prime subunit TERM 3381 2927531 - 2927510 - G 70 -9.5 -3.19091 | opp_overlap 2927509 ACACTCAGGCACCAA GTGACATCC TCTT GGATATCAC ATTGCTGCGCTAACC TERM 3382 2927901 - 2927885 - G 73 -3.5 -4.91459 | opp_overlap 2927886 2927888, overlap 2927886 2927887 CAAGACTTACAAAAA CCGCAGG CCC CCGCCGG TGTTGGCTGCAAACA TERM 3383 2927984 - 2927996 + g 75 -3.3 -5.02074 | overlap 2927990 2927993 TCAATGCCGACAAGC TGCGC ATG GGGCA TTTTTTGCCGCGTGA Shew185_2452 2928707 - 2928081 - | dTMP kinase TERM 3384 2928431 - 2928446 + g 79 -10.4 -3.76492 | opp_overlap 2928422 CCAATACCCATTGAC CCTGCG CAAG CGCAGG TTTAATGACATTGGC TERM 3385 2928747 - 2928759 + r 93 -6.9 -5.46657 | ACTTTGGTGATTTTT CTGGC GTC GCCGG TTTTTTCTTACGCTG Shew185_2453 2929767 - 2928730 - | aminodeoxychorismate lyase Shew185_2454 2930573 - 2929764 - | aminotransferase class IV Shew185_2455 2931160 - 2930579 - | deoxycytidine triphosphate deaminase Shew185_2456 2931830 - 2931192 - | uridine kinase Shew185_2457 2932957 - 2931842 - | ATP-binding Mrp/Nbp35 family protein TERM 3386 2934825 - 2934808 - g 82 -5.5 -5.0133 | CAGCGCCTGAAAAAA CCGCTGA AGCT TCATCGG TTAGCAGTGAACCGC Shew185_2458 2933118 - 2935187 + | methionyl-tRNA synthetase TERM 3387 2935240 - 2935217 - f 83 -9.6 -3.80855 | opp_overlap 2935217, overlap 2935213 2935220 CGCTCGAAAAATCAA TAAGGCCGCA TTTA TGTGGCCTTA TTTGTTGGTATCGAT TERM 3388 2935217 - 2935240 + F 95 -11.8 -4.29508 | opp_overlap 2935213 2935217 2935220 CGCTCGAAAAATCAA TAAGGCCGCA TTTA TGTGGCCTTA TTTGTTGGTATCGAT TERM 3389 2935237 - 2935220 - f 71 -6.9 -4.0257 | opp_overlap 2935217, overlap 2935217 2935213 TCGAAAAATCAATAA GGCCGCA TTTA TGTGGCC TTATTTGTTGGTATC Shew185_2459 2935469 - 2936425 + | auxin efflux carrier TERM 3390 2936529 - 2936513 - T 100 -13.7 -5.22312 | opp_overlap 2936513 ACTCACAGTAAAAAA GGCGAGC CAT GCTCGCC TTTCGATTAGGGATA TERM 3391 2936513 - 2936529 + T 95 -13.7 -3.75629 | opp_overlap 2936513 ACTCACAGTAAAAAA GGCGAGC CAT GCTCGCC TTTCGATTAGGGATA Shew185_2460 2937337 - 2936585 - | hypothetical protein Shew185_2461 2937878 - 2937408 - | 17 kDa surface antigen TERM 3392 2937824 - 2937811 - G 73 -9.5 -3.31792 | TGATTACGGTCATAA CCCGC ACTC GCGGG GCTGAGGATAAACGC Shew185_2462 2937933 - 2938646 + | leucyl/phenylalanyl-tRNA--protein transferase Shew185_2463 2938633 - 2939343 + | arginyl-tRNA-protein transferase TERM 3393 2939373 - 2939389 + F 76 -2.1 -5.47159 | overlap 2939374 CAGCAGGGTGAATTT GGGGCAT GAT ACGCCCG TTTTTTATATTCGAA Shew185_2464 2939426 - 2939644 + | translation initiation factor IF-1 TERM 3394 2939667 - 2939681 + T 100 -12.8 -5.95539 | opp_overlap 2939667 TCTTAGATTTAAAAA CCCGGC AAG GCCGGG TTTTTTTGTTTGCGA TERM 3395 2939681 - 2939667 - T 100 -12.8 -4.70659 | opp_overlap 2939667 TCTTAGATTTAAAAA CCCGGC AAG GCCGGG TTTTTTTGTTTGCGA TERM 3396 2939705 - 2939734 + T 83 -12.3 -2.88861 | opp_overlap 2939711, overlap 2939711 TTTGCGAAAGATGAA AAAAAATGGCTGC AATT GCAGCCATTTTTA TGTCTAAAACTAATG TERM 3397 2939728 - 2939711 - T 100 -11.3 -5.9663 | opp_overlap 2939705 2939711 AAAGATGAAAAAAAA TGGCTGC AATT GCAGCCA TTTTTATGTCTAAAA TERM 3398 2939711 - 2939728 + T 95 -11.3 -5.03994 | opp_overlap 2939711, overlap 2939705 AAAGATGAAAAAAAA TGGCTGC AATT GCAGCCA TTTTTATGTCTAAAA Shew185_2465 2942029 - 2939762 - | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 3399 2941354 - 2941365 + g 73 -7.2 -4.18018 | GATACGCCAGCCCTT CGGC AATC GCCG TTTTACCTACGCCCG TERM 3400 2941782 - 2941797 + g 71 -4.6 -4.59944 | overlap 2941778 2941784 AGCACTCGTTGGAAC CCCAGC GTCG GCTGAG TTTCTTTGTCATCAT Shew185_2466 2942381 - 2942073 - | ATP-dependent Clp protease adaptor protein ClpS Shew185_2467 2942576 - 2942782 + | cold-shock DNA-binding domain-containing protein TERM 3401 2942809 - 2942828 + T 100 -13.6 -5.14163 | opp_overlap 2942809 GCCAATGATCTAAAA GGCAGGGA CTTG TCCCTGCC TTTTTATTGCTGCGT TERM 3402 2942828 - 2942809 - T 100 -13.6 -4.23892 | opp_overlap 2942809 GCCAATGATCTAAAA GGCAGGGA CTTG TCCCTGCC TTTTTATTGCTGCGT TERM 3403 2942992 - 2943012 + T 100 -15.5 -4.62783 | opp_overlap 2942992 TTAGGGCATAAAAAA GGGATCTGC CAT GCAGATCCC TTTTTAAAATCAGTC TERM 3404 2943012 - 2942992 - T 100 -15.5 -5.26316 | opp_overlap 2942992 TTAGGGCATAAAAAA GGGATCTGC CAT GCAGATCCC TTTTTAAAATCAGTC Shew185_2468 2945330 - 2943105 - | isocitrate dehydrogenase, NADP-dependent TERM 3405 2944062 - 2944076 + g 73 -5.6 -4.58395 | GGTCTTATCGTGGCT GCCGTA CTC TTCGGC TTTTTGCGCCATCAA TERM 3406 2945914 - 2945887 - g 81 -9.9 -4.11394 | gap 1, opp_overlap 2945876 2945887 2945888, overlap 2945888 ATTGCAGCGGCAAAA CCGGTGCAGAGC CAAAC GCTC-GCACCGA TTATCGTGCTGTTTA TERM 3407 2945913 - 2945888 - g 74 -11.2 -3.06515 | gap 1, opp_overlap 2945888 2945887 2945876, overlap 2945887 TTGCAGCGGCAAAAC CGGTGCAGAGC CAAAC GCTC-GCACCG ATTATCGTGCTGTTT TERM 3408 2945888 - 2945913 + G 72 -11.2 -2.68304 | gap 1, opp_overlap 2945887 2945888, overlap 2945887 2945876 TTGCAGCGGCAAAAC CGGTGCAGAGC CAAAC GCTC-GCACCG ATTATCGTGCTGTTT Shew185_2469 2945611 - 2946459 + | pseudouridine synthase Shew185_2470 2946527 - 2947015 + | NUDIX hydrolase Shew185_2471 2947243 - 2948421 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Shew185_2472 2948425 - 2949042 + | hypothetical protein TERM 3409 2949688 - 2949664 - g 75 -5.7 -4.62772 | GTCAAATCAAACAAA TTGCCAATGTT GAA ATCATGGGCAA ACTGAACGGTGCCGT Shew185_2473 2949072 - 2950442 + | adenylosuccinate lyase TERM 3410 2950535 - 2950564 + F 100 -13 -5.04385 | gap 1, opp_overlap 2950535 AGAAATAAGGATTAA GGCGACTCACATC TCCGC GATGTG-GTCGCC TTTTTTAACACTATG TERM 3411 2950564 - 2950535 - f 93 -13 -3.35961 | gap 1, opp_overlap 2950535 AGAAATAAGGATTAA GGCGACTCACATC TCCGC GATGTG-GTCGCC TTTTTTAACACTATG TERM 3412 2951282 - 2951268 - g 73 -8.6 -3.89346 | GTTTCACCTCACAAA CTGAAC CGA GTTCAG CGGGTATCGTCAGCC Shew185_2474 2950577 - 2951716 + | cupin 4 family protein TERM 3413 2951806 - 2951783 - T 100 -14 -3.86524 | opp_overlap 2951783 2951786, overlap 2951786 ATACGTCTGTATAAA TAAGGCACTC AGTT GAGTGCCTTA TTGTTATTTCAATTA TERM 3414 2951783 - 2951806 + T 100 -14 -4.1235 | opp_overlap 2951783 2951786, overlap 2951786 ATACGTCTGTATAAA TAAGGCACTC AGTT GAGTGCCTTA TTGTTATTTCAATTA TERM 3415 2951786 - 2951803 + T 93 -11.3 -4.16033 | opp_overlap 2951786 2951783, overlap 2951783 CGTCTGTATAAATAA GGCACTC AGTT GAGTGCC TTATTGTTATTTCAA TERM 3416 2951803 - 2951786 - T 90 -11.3 -4.06419 | opp_overlap 2951783 2951786, overlap 2951783 CGTCTGTATAAATAA GGCACTC AGTT GAGTGCC TTATTGTTATTTCAA Shew185_2475 2952331 - 2951882 - | hypothetical protein TERM 3417 2952843 - 2952818 - g 73 -3.2 -4.88736 | opp_overlap 2952818 CATGACTTACAAAAA CGCCCTTG CCGGTTTAAC CATGGGCG GCGGCAAATCAGTGA TERM 3418 2953310 - 2953326 + G 78 -12.3 -2.73124 | overlap 2953309 GGATGTGTATGCTCC TTGCGCC CTT GGCGCAA CTTTAAACGATGCGA TERM 3419 2953390 - 2953366 - g 83 -9.3 -4.37198 | opp_overlap 2953366, overlap 2953368 AACTGAAAGCCAAAA TTGTTGCTGGC TGT GCCAACAACCA ATTAGCTGAAGTACG TERM 3420 2953388 - 2953368 - g 75 -11.9 -2.52017 | opp_overlap 2953366, overlap 2953366 CTGAAAGCCAAAATT GTTGCTGGC TGT GCCAACAAC CAATTAGCTGAAGTA Shew185_2476 2952612 - 2953646 + | Glu/Leu/Phe/Val dehydrogenase dimerisation region TERM 3421 2953689 - 2953675 - f 93 -11.4 -4.14472 | opp_overlap 2953675 GTAACATCCCCAAAA GCGACC TCT GGTCGC TTTTTTGTTATCTAA TERM 3422 2953675 - 2953689 + F 100 -11.4 -5.60689 | opp_overlap 2953675 GTAACATCCCCAAAA GCGACC TCT GGTCGC TTTTTTGTTATCTAA Shew185_2477 2953839 - 2954183 + | hypothetical protein Shew185_2478 2954738 - 2954322 - | MarR family transcriptional regulator TERM 3423 2954480 - 2954492 + g 74 -9.1 -3.72027 | AGATTTGAAAGGCGC GCCGA TTA TCGGC TTCTTGATGGCGGGT Shew185_2479 2955357 - 2954884 - | hypothetical protein TERM 3424 2955399 - 2955384 - R 100 -10.4 -5.64274 | opp_overlap 2955384 2955383 TCATCCATAAAAAAA CCAGCC TTGC GGCTGG CTTTAGTGTGACATT TERM 3425 2955384 - 2955399 + r 73 -10.4 -2.90345 | opp_overlap 2955384, overlap 2955383 TCATCCATAAAAAAA CCAGCC TTGC GGCTGG CTTTAGTGTGACATT Shew185_2480 2958521 - 2955480 - | FAD linked oxidase domain-containing protein TERM 3426 2958571 - 2958586 + r 93 -10.4 -5.03747 | opp_overlap 2958571 TATAAACAAAAAAAA GCCGCT AAAA AGCGGC TTTTTTAACAAGTTT TERM 3427 2958586 - 2958571 - R 100 -10.4 -6.28967 | opp_overlap 2958571 TATAAACAAAAAAAA GCCGCT AAAA AGCGGC TTTTTTAACAAGTTT Shew185_2481 2960989 - 2958620 - | phosphoenolpyruvate synthase TERM 3428 2961338 - 2961327 - g 73 -7.2 -4.14243 | CATTCGATCGTAAAA GCGG AGAT CCGC GACATCATCTACTCG Shew185_2482 2961114 - 2961926 + | hypothetical protein TERM 3429 2962764 - 2962789 + G 73 -8.3 -3.83066 | AAGATGGCGCGATGG CGGTTTATCGT ACCC ACGGTAATCCG TTTGGTCATATCATT TERM 3430 2962952 - 2962930 - g 76 -9.2 -3.84639 | TAACAGTGAGAAGAA CCACCTTAAG CAG CTTAACGTGG CTGATGAAATCATGG Shew185_2483 2962109 - 2963173 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3431 2963240 - 2963226 - T 100 -10 -5.4505 | opp_overlap 2963226 TTTTCCAATAAAAAA CCGATC TTT GATCGG TTTTTTTATTAACAG TERM 3432 2963226 - 2963240 + T 100 -10 -5.7946 | opp_overlap 2963226 TTTTCCAATAAAAAA CCGATC TTT GATCGG TTTTTTTATTAACAG Shew185_2484 2966723 - 2963340 - | glycoside hydrolase family protein TERM 3433 2964890 - 2964862 - G 73 -7.3 -4.20783 | overlap 2964826 2964864 ATCCCACGTAACAAA TAGCCCGATGCTG GCG CAGCAACGGTCAA CATATAGTGCTTACC TERM 3434 2964888 - 2964864 - G 76 -9.9 -3.70307 | overlap 2964826 2964862 CCCACGTAACAAATA GCCCGATGCTG GCG CAGCAACGGTC AACATATAGTGCTTA Shew185_2485 2967091 - 2967555 + | thioesterase superfamily protein TERM 3435 2967584 - 2967599 + F 78 -7.5 -4.4773 | opp_overlap 2967583 GTAAGCTATAGAACG GCCCG TTATCT CGGGC TTTTCATTACTATCG Shew185_2486 2967775 - 2968437 + | two component LuxR family transcriptional regulator TERM 3436 2968604 - 2968652 + T 76 -10.7 -2.58579 | gap 1, opp_overlap 2968607 2968618, overlap 2968618 AGTTTCAGCTAAACA TTATT-CCATAAAAATGCCGCT TATATT AGCGGCATTTTTATGTCAGTAA ATTATGGCCAATTAA TERM 3437 2968648 - 2968607 - T 81 -11.8 -2.86124 | opp_overlap 2968604 2968618, overlap 2968618 TTCAGCTAAACATTA TTCCATAAAAATGCCGCT TATATT AGCGGCATTTTTATGTCA GTAAATTATGGCCAA TERM 3438 2968637 - 2968618 - T 90 -9.3 -4.86001 | opp_overlap 2968604 2968618, overlap 2968607 ATTATTCCATAAAAA TGCCGCT TATATT AGCGGCA TTTTTATGTCAGTAA TERM 3439 2968618 - 2968637 + T 90 -9.3 -4.99035 | opp_overlap 2968618 2968607, overlap 2968604 ATTATTCCATAAAAA TGCCGCT TATATT AGCGGCA TTTTTATGTCAGTAA Shew185_2487 2969647 - 2968664 - | transcriptional regulator CysB TERM 3440 2970364 - 2970354 - g 71 -6.8 -4.24342 | opp_overlap 2970353 TTGCTCAGGAAGAAA GTCG TAT CGAC AGTTTACAGCTCAGG Shew185_2488 2969876 - 2970655 + | hypothetical protein TERM 3441 2970806 - 2970851 + T 93 -13.8 -3.09671 | gap 2, opp_overlap 2970806 2970817, overlap 2970817 TCTCTAAAGAAAATC G-A-AACAAAAAAGCCAAGTCA TTAT TGACTTGGCTTTTTTGTTATTC TCTTGGCGTTAAACT TERM 3442 2970849 - 2970806 - T 95 -15.6 -2.70452 | opp_overlap 2970806 2970817, overlap 2970817 TCTCTAAAGAAAATC GAAACAAAAAAGCCAAGTCA TTAT TGACTTGGCTTTTTTGTTAT TCTCTTGGCGTTAAA TERM 3443 2970817 - 2970838 + T 100 -13.1 -5.68489 | opp_overlap 2970817 2970806, overlap 2970806 AATCGAAACAAAAAA GCCAAGTCA TTAT TGACTTGGC TTTTTTGTTATTCTC TERM 3444 2970838 - 2970817 - T 100 -13.1 -5.67283 | opp_overlap 2970806 2970817, overlap 2970806 AATCGAAACAAAAAA GCCAAGTCA TTAT TGACTTGGC TTTTTTGTTATTCTC Shew185_2489 2973523 - 2970881 - | DNA topoisomerase I TERM 3445 2971120 - 2971134 + g 75 -11.4 -2.72144 | opp_overlap 2971099, overlap 2971119 2971122 CCTCAACCAGAGGCG CACGGG TTT CCCGTG ATTTAGGGAAGGTAC TERM 3446 2972000 - 2972032 + g 73 -2.5 -5.05301 | opp_overlap 2972001, overlap 2972001 AATCGTTGAAATAAT AGTTGCATAGGTCGA TGG TCGCCCAATGCCGCG TTTTTCTAATTCTTT Shew185_2490 2973854 - 2975188 + | succinylarginine dihydrolase TERM 3447 2975177 - 2975202 + T 90 -9.9 -4.33258 | gap 1, opp_overlap 2975162 2975158, overlap 2975177 GGAAGTGTGTATCAG TT-CCAGCGTTA GAA TAACGCTGGCAA TTTATATTTCACACT TERM 3448 2975177 - 2975201 + T 82 -11.5 -3.19232 | opp_overlap 2975162 2975158, overlap 2975177 GGAAGTGTGTATCAG TTCCAGCGTTA GAA TAACGCTGGCA ATTTATATTTCACAC TERM 3449 2975260 - 2975240 - T 100 -11.1 -5.50774 | opp_overlap 2975240 CATAATAAAGAAAAA CGCCCGAAT GCT AATCGGGCG TTTTCGCTGTACTAA TERM 3450 2975240 - 2975260 + T 90 -11.1 -4.24948 | opp_overlap 2975240 CATAATAAAGAAAAA CGCCCGAAT GCT AATCGGGCG TTTTCGCTGTACTAA Shew185_2491 2978925 - 2975296 - | Ig domain-containing protein Shew185_2492 2979148 - 2980470 + | sodium:dicarboxylate symporter TERM 3451 2980491 - 2980512 + F 100 -9.4 -5.29846 | GTTAAATACCCATCA CGCCCAGC CTCTGT GTTGGGCG TTTTTGTTTACGCTT Shew185_2493 2980665 - 2981024 + | hypothetical protein TERM 3452 2981539 - 2981529 - g 74 -6.8 -4.31587 | opp_overlap 2981533, overlap 2981526 TTTCAAAAAGAAGAA CTCG TCG CGAG ACTCGATGCCTTAGT Shew185_2494 2981199 - 2981882 + | two component transcriptional regulator TERM 3453 2981911 - 2981900 - g 72 -5.8 -4.32607 | opp_overlap 2981900, overlap 2981896 2981893 TTAAAATTTAAGAAA CGTC TGCT GACG CGGATGTTTCTCACC Shew185_2495 2981873 - 2983222 + | integral membrane sensor signal transduction histidine kinase Shew185_2496 2984012 - 2983317 - | 2OG-Fe(II) oxygenase TERM 3454 2983432 - 2983451 + g 80 -5 -5.00884 | TGAGTGAATCCCGCA GGTGCTAT CACC ATAGTGCC TTTTTTCGGGGAAAT Shew185_2497 2984131 - 2985393 + | metal dependent phosphohydrolase TERM 3455 2985517 - 2985545 + T 100 -13.3 -5.37593 | opp_overlap 2985517 2985520, overlap 2985520 TGGCACTGATAAAAA TAAGGGTCGAATA TTG TATTCGACCCTTC TTTTTTAATTTGAGA TERM 3456 2985545 - 2985517 - T 100 -13.3 -4.87665 | opp_overlap 2985517 2985520, overlap 2985520 TGGCACTGATAAAAA TAAGGGTCGAATA TTG TATTCGACCCTTC TTTTTTAATTTGAGA TERM 3457 2985520 - 2985542 + T 100 -15 -4.76088 | opp_overlap 2985520 2985517, overlap 2985517 CACTGATAAAAATAA GGGTCGAATA TTG TATTCGACCC TTCTTTTTTAATTTG TERM 3458 2985542 - 2985520 - T 100 -15 -4.5448 | opp_overlap 2985517 2985520, overlap 2985517 CACTGATAAAAATAA GGGTCGAATA TTG TATTCGACCC TTCTTTTTTAATTTG Shew185_2498 2986531 - 2985584 - | magnesium and cobalt transport protein CorA Shew185_2499 2987029 - 2986658 - | hypothetical protein Shew185_2500 2987837 - 2987388 - | hypothetical protein Shew185_2501 2988565 - 2987834 - | NAD-dependent deacetylase Shew185_2502 2988823 - 2989254 + | ferric uptake regulator TERM 3459 2989308 - 2989284 - T 80 -11.5 -2.88861 | opp_overlap 2989289, overlap 2989289 CATCAGCGTGACACA GAAAACCAGCC TGA GGCTGGTTTTT TATTGGATGATGTGA TERM 3460 2989289 - 2989303 + T 100 -11.4 -5.4833 | opp_overlap 2989284 2989289 GCGTGACACAGAAAA CCAGCC TGA GGCTGG TTTTTTATTGGATGA TERM 3461 2989303 - 2989289 - T 93 -11.4 -4.60797 | opp_overlap 2989289, overlap 2989284 GCGTGACACAGAAAA CCAGCC TGA GGCTGG TTTTTTATTGGATGA Shew185_2503 2989833 - 2989336 - | GCN5-related N-acetyltransferase Shew185_2504 2990349 - 2989942 - | GreA/GreB family elongation factor TERM 3462 2990478 - 2990454 - R 70 -7.8 -3.73486 | opp_overlap 2990454, overlap 2990452 CCCATAATACAAATA CGCTCGCAGC GAAAA GCTGCAACCG TGTGATATAAATTTG TERM 3463 2990752 - 2990738 - R 100 -12.8 -5.49234 | opp_overlap 2990738 ACAGCCAATAAAAAA GGCGCC TTA GGCGCC TTTTATCATCGTAAG TERM 3464 2990738 - 2990752 + r 100 -12.8 -4.4891 | opp_overlap 2990738 ACAGCCAATAAAAAA GGCGCC TTA GGCGCC TTTTATCATCGTAAG Shew185_2505 2991646 - 2990774 - | succinyl-CoA synthetase, alpha subunit Shew185_2506 2992812 - 2991646 - | succinyl-CoA synthetase subunit beta TERM 3465 2992870 - 2992842 - R 73 -8.2 -3.91352 | gap 1, opp_overlap 2992860, overlap 2992847 ATACTTCTAATCAAA TC-CAACTGGCCC GTTT GGGCCAGTCACGA GGGTATGTCTGGCTA TERM 3466 2992864 - 2992847 - R 87 -12.7 -3.33399 | opp_overlap 2992860, overlap 2992842 TCTAATCAAATCCAA CTGGCCC GTTT GGGCCAG TCACGAGGGTATGTC Shew185_2507 2994108 - 2992918 - | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase Shew185_2508 2996971 - 2994140 - | alpha-ketoglutarate decarboxylase TERM 3467 2997142 - 2997113 - R 100 -15.9 -4.26589 | opp_overlap 2997115 2997140 ATTACATACGCAAAA GAGTCACCTTCTG CTAC CAGAAAGTGACTC TTCAAGAGCTATATT TERM 3468 2997115 - 2997140 + r 75 -10.5 -3.02829 | opp_overlap 2997113 TACATACGCAAAAGA GTCACCTTCTG CTAC CAGAAAGTGAC TCTTCAAGAGCTATA Shew185_2509 2997893 - 2997186 - | succinate dehydrogenase iron-sulfur subunit Shew185_2510 2999671 - 2997905 - | succinate dehydrogenase flavoprotein subunit Shew185_2511 3000019 - 2999672 - | succinate dehydrogenase hydrophobic membrane anchor Shew185_2512 3000408 - 3000013 - | succinate dehydrogenase cytochrome b556 subunit TERM 3469 3000401 - 3000414 + g 93 -2.3 -6.19302 | overlap 3000398 3000402 ACGTTCTGCTCACTC AGCTC CATT GAGCA TTTTTTTTGTTATGT TERM 3470 3001775 - 3001756 - g 71 -4.3 -4.82901 | opp_overlap 3001756 CCGTGTTTACAAAAA CTTTGAC CCACGT GCCAAAG TTATGCGTGAAACCT Shew185_2513 3000824 - 3002110 + | type II citrate synthase TERM 3471 3002135 - 3002148 + F 100 -9.5 -5.21709 | opp_overlap 3002135 CTTACGCATTAAAAA GCGCC TGAG GGCGC TTTTTTCATATCAAA TERM 3472 3002148 - 3002135 - f 93 -9.5 -4.7497 | opp_overlap 3002135 CTTACGCATTAAAAA GCGCC TGAG GGCGC TTTTTTCATATCAAA Shew185_2514 3002409 - 3003473 + | RND family efflux transporter MFP subunit Shew185_2515 3003486 - 3006743 + | acriflavin resistance protein TERM 3473 3008599 - 3008589 - g 76 -2.4 -5.27023 | opp_overlap 3008589, overlap 3008584 AGTTGAAAAAGAAAA TCCG CAG CGGC TTCCCTAAGTATTCG TERM 3474 3009543 - 3009557 + G 70 -10 -3.11178 | overlap 3009549 GCCCAGTATTGATGA CTGTGG GCA CCACAG TGTTGGGCTTAGTTC Shew185_2516 3006740 - 3009787 + | acriflavin resistance protein TERM 3475 3009867 - 3009841 - T 90 -12.4 -3.70405 | opp_overlap 3009847, overlap 3009847 GATTAAAACAATGAA CAAAAAGGCTGC AGC GCAGCCTTTTTT ATTTATTAATTTAGC TERM 3476 3009861 - 3009847 - T 100 -11.4 -5.23396 | opp_overlap 3009847, overlap 3009841 AACAATGAACAAAAA GGCTGC AGC GCAGCC TTTTTTATTTATTAA TERM 3477 3009847 - 3009861 + T 100 -11.4 -5.80003 | opp_overlap 3009841 3009847 AACAATGAACAAAAA GGCTGC AGC GCAGCC TTTTTTATTTATTAA Shew185_2517 3010234 - 3009917 - | hypothetical protein TERM 3478 3010282 - 3010269 - H 72 -3.1 -5.15167 | opp_overlap 3010269 CAGGAGCAATAAAAA TGACA TTAG CGTCA GTTTATCGAACTAAT Shew185_2518 3010585 - 3010782 + | hypothetical protein TERM 3479 3010901 - 3010932 + T 100 -13.2 -4.75308 | opp_overlap 3010906, overlap 3010906 GACGCCGCTTCAAAC AAAAATGCCACAAG CAAT CTTGTGGCATTTTG TTTTTCAGTATTCCT TERM 3480 3010906 - 3010927 + T 100 -13.1 -5.2853 | opp_overlap 3010906, overlap 3010901 CGCTTCAAACAAAAA TGCCACAAG CAAT CTTGTGGCA TTTTGTTTTTCAGTA TERM 3481 3010927 - 3010906 - T 100 -13.1 -5.27335 | opp_overlap 3010906 3010901 CGCTTCAAACAAAAA TGCCACAAG CAAT CTTGTGGCA TTTTGTTTTTCAGTA Shew185_2519 3012542 - 3010995 - | MATE efflux family protein TERM 3482 3011360 - 3011350 - G 80 -6.8 -4.78933 | CCAAAATACACAAAA GGCA CTG TGCC TAAGGTGGCTTTACC Shew185_2520 3013445 - 3012591 - | Ion transport protein Shew185_2521 3013564 - 3014130 + | hypothetical protein TERM 3483 3014188 - 3014205 + F 83 -4.8 -5.27938 | opp_overlap 3014188 GCACGATATCAAACA CGCTCA GCTTAA TGGGCG TTTTTATTTAACCAT Shew185_2522 3014306 - 3014971 + | hypothetical protein TERM 3484 3015092 - 3015076 - f 79 -5.9 -4.87291 | TACCTGAATTAAAAA CTTAGTC AAA AACTAAG TTAAAACCGAAGATA TERM 3485 3015303 - 3015281 - f 79 -11.4 -2.70528 | opp_overlap 3015286, overlap 3015278 3015286 ATCAGGCACACATTA TCGAATCCAC TTA ATGGATTCGA TGTGCAAACAGAGGA Shew185_2523 3015325 - 3015585 + | hypothetical protein TERM 3486 3015714 - 3015735 + T 70 -8.7 -3.2794 | opp_overlap 3015716, overlap 3015716 TAAGAATCATAAAAA AATGGCGCA TCAT TGCGCCATG TTAGTGTGCCTGAAC TERM 3487 3015716 - 3015733 + T 82 -11.3 -3.20573 | opp_overlap 3015716, overlap 3015714 AGAATCATAAAAAAA TGGCGCA TCAT TGCGCCA TGTTAGTGTGCCTGA TERM 3488 3015733 - 3015716 - T 100 -11.3 -5.73339 | opp_overlap 3015716 3015714 AGAATCATAAAAAAA TGGCGCA TCAT TGCGCCA TGTTAGTGTGCCTGA Shew185_2524 3016626 - 3015763 - | peptidase M23B TERM 3489 3016973 - 3016953 - R 100 -11.1 -5.47431 | TGAAGACACAAAAAA GCCCCGACA ATC CGTCGAGGC CCATTGAGCAAGCAA Shew185_2525 3017891 - 3017019 - | isocitrate dehydrogenase (NADP(+)) Shew185_2526 3018519 - 3019553 + | cytochrome-c peroxidase TERM 3490 3019636 - 3019601 - T 95 -14.2 -3.1247 | opp_overlap 3019607, overlap 3019607 ACGGGTCAGACCCAA CAAAAAGGCCAAGAGT AAAC ACTCTCGGCCTTTTCA CGTTCGTTACCTTGA TERM 3491 3019630 - 3019607 - T 100 -13.2 -5.12068 | opp_overlap 3019607, overlap 3019601 CAGACCCAACAAAAA GGCCAAGAGT AAAC ACTCTCGGCC TTTTCACGTTCGTTA TERM 3492 3019607 - 3019630 + T 90 -11 -4.21768 | opp_overlap 3019601 3019607 CAGACCCAACAAAAA GGCCAAGAGT AAAC ACTCTCGGCC TTTTCACGTTCGTTA Shew185_2527 3020704 - 3019676 - | nucleoid-associated protein NdpA Shew185_2528 3020743 - 3021000 + | hypothetical protein TERM 3493 3021120 - 3021084 - g 82 -5.1 -5.08824 | overlap 3021089 GGTCGAGCGAAAAAA GCAAATGAGCCGCGA TCGGGTT TCCCGGCTCATCAAC TGGGGACATTGGTTC TERM 3494 3021115 - 3021089 - g 78 -8 -4.43669 | overlap 3021084 AGCGAAAAAAGCAAA TGAGCCGCGA TCGGGTT TCCCGGCTCA TCAACTGGGGACATT Shew185_2529 3021067 - 3022854 + | sulfatase TERM 3495 3022870 - 3022907 + T 95 -14.3 -3.06183 | opp_overlap 3022855 3022877, overlap 3022877 TCTTCATCCTCTGCT TGAAGAAGCCCCACTCC TAGC GGATTGGGGCTTTTTTA TTCCCTAGCGGTAGG TERM 3496 3022900 - 3022877 - T 90 -12.4 -3.61398 | opp_overlap 3022877 3022870 CCTCTGCTTGAAGAA GCCCCACTCC TAGC GGATTGGGGC TTTTTTATTCCCTAG TERM 3497 3022877 - 3022900 + T 100 -12.4 -5.4833 | opp_overlap 3022877, overlap 3022870 CCTCTGCTTGAAGAA GCCCCACTCC TAGC GGATTGGGGC TTTTTTATTCCCTAG TERM 3498 3023111 - 3023132 + T 82 -8.7 -4.14392 | opp_overlap 3023111 TTCACAAAGCAAAAA GCCGCTATC CATG GATAACGGC TTTTAAGACTTAGGC TERM 3499 3023132 - 3023111 - T 93 -10.9 -5.04601 | opp_overlap 3023111 TTCACAAAGCAAAAA GCCGCTATC CATG GATAACGGC TTTTAAGACTTAGGC Shew185_2530 3024385 - 3023279 - | NADH:flavin oxidoreductase/NADH oxidase Shew185_2531 3024504 - 3025370 + | LysR family transcriptional regulator TERM 3500 3025509 - 3025528 + T 91 -12.2 -3.86897 | opp_overlap 3025509 CTAAAAAACAAAAAA GCCCCATT TTAA AATGGGGC TTTATACGAGCTGCA TERM 3501 3025528 - 3025509 - T 100 -12.2 -6.04324 | opp_overlap 3025509 CTAAAAAACAAAAAA GCCCCATT TTAA AATGGGGC TTTATACGAGCTGCA Shew185_2532 3026185 - 3025589 - | hypothetical protein TERM 3502 3026151 - 3026135 - G 75 -5.1 -4.79756 | opp_overlap 3026145, overlap 3026138 GACAGAAGCCAAAAA CAACTGA CTG TCAGTAG GTGCTGATCTTGCTC TERM 3503 3026148 - 3026138 - G 73 -5.4 -4.48792 | opp_overlap 3026145, overlap 3026135 AGAAGCCAAAAACAA CTGA CTG TCAG TAGGTGCTGATCTTG TERM 3504 3026243 - 3026270 + r 72 -3.5 -5.10767 | overlap 3026245 GAATGCAAATATCGG TGTTTAACGTG TCATTT CACGTTAAGAA TTTTTGTCTTAACTG TERM 3505 3026398 - 3026359 - R 100 -13.8 -5.20633 | gap 1, opp_overlap 3026361 3026366, overlap 3026361 AAAAAGATATAAAAA CACAAAACCCCGTA-TAGC AAT GCTACCACGGGGTTTTGTT TTTACTTAACTGTCA TERM 3506 3026361 - 3026396 + r 100 -14.2 -4.89009 | gap 1, opp_overlap 3026359 3026361, overlap 3026366 AAAGATATAAAAACA CAAAACCCCGT-ATAGC AAT GCTACCACGGGGTTTTG TTTTTACTTAACTGT TERM 3507 3026396 - 3026361 - R 100 -16.4 -4.18187 | gap 1, opp_overlap 3026361 3026366, overlap 3026359 AAAGATATAAAAACA CAAAACCCCGTA-TAGC AAT GCTACCACGGGGTTTTG TTTTTACTTAACTGT TERM 3508 3026366 - 3026391 + r 93 -8.3 -5.34655 | gap 1, opp_overlap 3026361 3026359, overlap 3026361 TATAAAAACACAAAA CCCCGT-ATAGC AAT GCTACCACGGGG TTTTGTTTTTACTTA TERM 3509 3026784 - 3026794 + r 71 -6.8 -4.03413 | TTTATTCAGGCCAAC GTCG CTC CGAC TTTATCTAGAAGCAT Shew185_2533 3027717 - 3026959 - | TetR family transcriptional regulator TERM 3510 3027397 - 3027417 + g 75 -6.1 -4.61566 | opp_overlap 3027397, overlap 3027401 AGAAACAGAACGTAA CGTTGCAAA GCT TTTGCTGCG TTTTATCGTTTCAAA TERM 3511 3027749 - 3027737 - H 74 -4.8 -4.6971 | opp_overlap 3027737 TAAACCCGAATAAAA CGCT AAGTA AGCG TGAATTATGCGTTGT TERM 3512 3027808 - 3027825 + H 81 -5.5 -5.11389 | opp_overlap 3027809, overlap 3027809 GACTAATCGGGATAA AGCTCAC GCAA GTGAGCA TTTTATTTATGTTCT TERM 3513 3027824 - 3027809 - H 79 -9 -3.89881 | opp_overlap 3027809 3027808 ACTAATCGGGATAAA GCTCAC GCAA GTGAGC ATTTTATTTATGTTC TERM 3514 3027809 - 3027824 + H 76 -9 -3.64393 | opp_overlap 3027809, overlap 3027808 ACTAATCGGGATAAA GCTCAC GCAA GTGAGC ATTTTATTTATGTTC TERM 3515 3028633 - 3028653 + G 85 -11.3 -3.79747 | opp_overlap 3028622 3028620, overlap 3028620 AGGAGTTGAATATCG TCTTCAACA CTA TGTTGAAGA TTTCATAATGGATGG Shew185_2534 3028064 - 3029584 + | flavocytochrome c Shew185_2535 3029590 - 3029958 + | tetraheme cytochrome c, putative Shew185_2536 3029999 - 3031135 + | hypothetical protein TERM 3516 3031169 - 3031201 + F 76 -10.7 -2.57877 | opp_overlap 3031165 3031169, overlap 3031168 3031167 GTTTGTAATAATCAA GTCGATCAGGACG TTCCTGC CGTTTTGATCGAC CGTTCTTTTTATGCC TERM 3517 3031213 - 3031231 + F 100 -8.9 -5.93252 | CGACCGTTCTTTTTA TGCCCTA TTTAT TAGGGCA TTTTTTATTTTTCAA Shew185_2537 3031263 - 3032378 + | hypothetical protein Shew185_2538 3032553 - 3033296 + | hypothetical protein TERM 3518 3033336 - 3033309 - f 100 -15.8 -3.8698 | opp_overlap 3033304 3033313 3033328, overlap 3033313 TAAGCCAAATTGAAA TAAACCACCTTC CTAA GAAGGTGGTTTA GCCATCTTTGTTCCG TERM 3519 3033313 - 3033332 + F 89 -12.2 -3.6292 | opp_overlap 3033309 3033313, overlap 3033304 3033328 CCAAATTGAAATAAA CCACCTTC CTAA GAAGGTGG TTTAGCCATCTTTGT TERM 3520 3033332 - 3033313 - f 95 -12.2 -4.53439 | opp_overlap 3033313 3033304 3033328, overlap 3033309 CCAAATTGAAATAAA CCACCTTC CTAA GAAGGTGG TTTAGCCATCTTTGT TERM 3521 3034116 - 3034096 - f 77 -8.3 -3.94812 | overlap 3034105 CCGCATCGAAAAACA GTTGAACCA TAT TGGTGCAAC ACACTGAACAACACC TERM 3522 3034456 - 3034414 - f 100 -14.1 -4.90918 | ACAAAAGCAACAAAA GCGCGCCGTTGCATCCTCC TCTAG GGTTGATGCAACGACTCGC CTGTAGCCCTACTGC TERM 3523 3035816 - 3035777 - g 88 -13.9 -2.62983 | opp_overlap 3035784, overlap 3035784 TTCAGGTTTAGATGA GTTAGAATCAGCAATGA ATATCG TCATTGCTGATTCTAAA GTAAAGTCTGTGGGT TERM 3524 3035809 - 3035784 - g 75 -10.6 -3.38768 | opp_overlap 3035784, overlap 3035777 TTAGATGAGTTAGAA TCAGCAATGA ATATCG TCATTGCTGA TTCTAAAGTAAAGTC TERM 3525 3035784 - 3035809 + G 75 -10.6 -3.33162 | opp_overlap 3035777 3035784 TTAGATGAGTTAGAA TCAGCAATGA ATATCG TCATTGCTGA TTCTAAAGTAAAGTC TERM 3526 3036073 - 3036061 - g 73 -3.4 -4.86621 | ACTCGCAACTAAAAA TCCA ACCTG TGGA GGTATTAACTGGGCT Shew185_2539 3035352 - 3036737 + | hypothetical protein TERM 3527 3036932 - 3036968 + F 72 -8.4 -3.58269 | gap 1, opp_overlap 3036920 3036940, overlap 3036940 CTATTGATAAAAGCA TC-AAAAAATACGTAAT TAAC ATTACGTATTTTTTCGG TTTAAGCATCGCTTC TERM 3528 3036959 - 3036940 - f 91 -8 -5.25656 | opp_overlap 3036940 3036932 AAAAGCATCAAAAAA TACGTAAT TAAC ATTACGTA TTTTTTCGGTTTAAG TERM 3529 3036940 - 3036959 + F 91 -8 -5.22039 | opp_overlap 3036940, overlap 3036932 AAAAGCATCAAAAAA TACGTAAT TAAC ATTACGTA TTTTTTCGGTTTAAG TERM 3530 3037260 - 3037285 + F 78 -10.6 -2.92192 | opp_overlap 3037269, overlap 3037269 3037272 AAGATGGCAGCCACT CCAGAACAAT CAGACC ATTGTTCTGG TCTAATTCCATCGGA Shew185_2540 3037345 - 3038504 + | transposase IS3/IS911 family protein TERM 3531 3038756 - 3038776 + T 71 -6.9 -4.00042 | opp_overlap 3038756 GAAAATTGGCTCAAA CTTACCACA GAA TTTGGTAAG TTATTTCATGGCCCG TERM 3532 3038827 - 3038810 - T 73 -8.5 -3.66844 | opp_overlap 3038809 GGCACACTGCAAGAA CTCACAA GCTA TTGTGAG CATTTAGAAAAACGT TERM 3533 3038850 - 3038840 - T 70 -3.2 -4.88736 | GAGCATTTAGAAAAA CGTC GAC GACA CTTCTCGAGTTGCTG TERM 3534 3039150 - 3039179 + T 72 -10.1 -2.52543 | opp_overlap 3039156, overlap 3039156 TGACTATGAGCATTG GCTAAAGCGGTAA GCTA TTGCCGCTTTAGG TGGCTTCCGGCAGGT TERM 3535 3039156 - 3039173 + T 70 -7.7 -3.68619 | opp_overlap 3039156, overlap 3039150 TGAGCATTGGCTAAA GCGGTAA GCTA TTGCCGC TTTAGGTGGCTTCCG Shew185_2542 3039754 - 3039209 - | hypothetical protein TERM 3536 3039484 - 3039494 + g 71 -8.2 -3.68569 | overlap 3039483 TCTTCACATCGGACG GGGC CGC GCCC TTATTGACTGCGTCA Shew185_2543 3040111 - 3039935 - | hypothetical protein TERM 3537 3040430 - 3040388 - R 81 -6.9 -4.79657 | overlap 3040379 3040392 ACAAGACCAACAAAA GCACGCCATTGCATCCTCC TGTAG GGTTGATGCAACGACTCGC CTGTAGCCTTACTGC Shew185_2544 3043573 - 3041672 - | methyl-accepting chemotaxis sensory transducer TERM 3538 3043624 - 3043606 - R 90 -10.3 -4.41348 | opp_overlap 3043606, overlap 3043620 GTGGTGTGAAATAAA GAGGCTG GGAAG CAGCCTC TTTGGATGGCTTAGC TERM 3539 3043606 - 3043624 + r 80 -10.3 -3.68619 | opp_overlap 3043606 3043620 GTGGTGTGAAATAAA GAGGCTG GGAAG CAGCCTC TTTGGATGGCTTAGC Shew185_2545 3044775 - 3043654 - | porin TERM 3540 3044870 - 3044849 - R 93 -12.3 -3.82486 | opp_overlap 3044848 ATTGAAGATGAAGAA GCTGAGCGC CAGC GCACTCAGC CTAGGTTTGGTTTTA Shew185_2546 3045863 - 3044883 - | formate dehydrogenase, gamma subunit TERM 3541 3045952 - 3045968 + r 86 -9.5 -4.01737 | GACTCATCGGTATAC CCGTTAA TGC TTAACGG TTTGATGTTGTTCAT Shew185_2547 3046554 - 3045955 - | cytoplasmic chaperone TorD family protein Shew185_2548 3047099 - 3046554 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shew185_2549 3049323 - 3047110 - | molydopterin dinucleotide-binding region TERM 3542 3048153 - 3048165 + g 76 -9.1 -3.91087 | opp_overlap 3048152 GGTTAGGGTGAATAT GGTCG GCA CGACC TTTACTGTAGTTTAA TERM 3543 3049344 - 3049358 + r 87 -8.6 -4.58644 | TCACCCACTATGTTT TGAACC TTA GGTTCA TTTTGATTATTGGTT Shew185_2550 3050871 - 3049435 - | disulphide bond formation protein DsbB TERM 3544 3050821 - 3050795 - G 73 -2.3 -5.10163 | gap 1, overlap 3050798 AATCCGAAAATAAAA CA-AGCAATACC AACG GGTAATGCCATG ATAATAATAGAAGCA TERM 3545 3050817 - 3050798 - G 77 -6.4 -4.6313 | overlap 3050795 CCGAAAATAAAACAA GCAATACC AACG GGTAATGC CATGATAATAATAGA Shew185_2551 3052044 - 3051082 - | LysR family transcriptional regulator TERM 3546 3052788 - 3052805 + r 73 -6.9 -4.15201 | opp_overlap 3052774, overlap 3052789 ACCGGCTAACCCGCC AGCCCTC GTAA GAGGGCG TTTCATTTAATTCAT TERM 3547 3052789 - 3052804 + r 75 -10.4 -3.08036 | overlap 3052788 CCGGCTAACCCGCCA GCCCTC GTAA GAGGGC GTTTCATTTAATTCA Shew185_2553 3053171 - 3052812 - | hypothetical protein Shew185_2554 3053376 - 3053161 - | XRE family transcriptional regulator Shew185_2555 3054699 - 3053431 - | phage integrase family protein Shew185_2556 3054924 - 3054700 - | hypothetical protein Shew185_2557 3055600 - 3054914 - | replication P family protein Shew185_2558 3056388 - 3055597 - | putative replication protein Shew185_2559 3057300 - 3056533 - | hypothetical protein Shew185_2560 3057764 - 3057438 - | hypothetical protein Shew185_2561 3058393 - 3057770 - | hypothetical protein TERM 3548 3058135 - 3058121 - G 70 -7.8 -3.92324 | opp_overlap 3058128 TTGCTCAACATGAAA CAAGCG ATC CGCCTG TGGATGTTGGCCCTC Shew185_2562 3058631 - 3058437 - | hypothetical protein Shew185_2563 3058770 - 3059447 + | putative phage repressor TERM 3549 3059732 - 3059759 + T 82 -8.4 -4.14175 | gap 1, opp_overlap 3059725 3059733, overlap 3059733 TGGAGTAACGCTCAA AGCAGC-GGCGCT GTA AGCGTCAGCTGCC TTTACTTGTTATATT TERM 3550 3059758 - 3059733 - T 79 -9.7 -3.61764 | gap 1, opp_overlap 3059733 3059732, overlap 3059725 GGAGTAACGCTCAAA GCAGC-GGCGCT GTA AGCGTCAGCTGC CTTTACTTGTTATAT TERM 3551 3059733 - 3059758 + T 82 -11.9 -3.06878 | gap 1, opp_overlap 3059725 3059733, overlap 3059732 GGAGTAACGCTCAAA GCAGC-GGCGCT GTA AGCGTCAGCTGC CTTTACTTGTTATAT Shew185_2564 3060517 - 3059786 - | hypothetical protein Shew185_2565 3061641 - 3060649 - | cobyrinic acid ac-diamide synthase TERM 3552 3060921 - 3060933 + g 72 -6.2 -4.32046 | ACGCTTGAACTGGTT GGCG AACTC CGCC TTTAGTTTTTGCACG TERM 3553 3061261 - 3061282 + g 77 -2.9 -5.24129 | overlap 3061263 GATAGCATAAGTTGT TTGAAAGCC TCTA GGCTCTCCA TTTTTTGTCGCAGCC TERM 3554 3061741 - 3061684 - R 82 -8.7 -4.18762 | gap 2, opp_overlap 3061684 3061684 3061690 3061692 3061693, overlap 3061689 AATTTCTATTTAAAA TATAACGCCGCAATT-CAGC-GGCGCG GCTTTT CACGCCCGCTGAAATTGCATTGTTATA CTTTTTCATTCATGA TERM 3555 3061706 - 3061689 - R 86 -9.8 -3.97622 | opp_overlap 3061684 3061684 3061690 3061692 3061693, overlap 3061684 CTATTTAAAATATAA CGCCGC AATTCA GCGGCG CGGCTTTTCACGCCC TERM 3556 3061693 - 3061732 + r 72 -9.5 -2.97717 | opp_overlap 3061689 3061684, overlap 3061690 3061692 3061684 3061684 TTAAAATATAACGCC GCAATT-CAGCGGCGCG GCTTTTCA CGC-CCGCTGAAATTGC ATTGTTATACTTTTT Shew185_2566 3062982 - 3062134 - | cobyrinic acid ac-diamide synthase TERM 3557 3063148 - 3063130 - R 72 -10.4 -2.65354 | TCTATTGGAAATTTA TTATGGAG ATA CTCCATAA ACTCATCGACAACAA Shew185_2567 3064031 - 3063108 - | hypothetical protein TERM 3558 3064353 - 3064384 + H 72 -10.4 -2.61548 | overlap 3064350 3064357 TAGTCTGCATGCGCG TTAACCTCATTTGA CTAG TAAAATGAGGTTAA TCACTTGTAATAAAA TERM 3559 3064599 - 3064567 - H 72 -4.3 -4.77925 | overlap 3064569 AAAAAAGCTTAAAAA TAGATAAGTATTAAT ACA ACTCATACCTATCCA GTTTTGGTCACTTGT Shew185_2568 3064889 - 3065251 + | hypothetical protein TERM 3560 3065458 - 3065434 - g 71 -8.6 -3.63569 | gap 1, overlap 3065423 TCAAGCGGCCAAGAA GTGCAGCACCT CTGT AGGCGC-GCAC CCTAACCGCCGTCAA Shew185_2569 3065378 - 3065725 + | hypothetical protein Shew185_2570 3065756 - 3066385 + | hypothetical protein Shew185_2571 3066382 - 3067446 + | hypothetical protein Shew185_2572 3067443 - 3067736 + | hypothetical protein Shew185_2573 3067737 - 3068015 + | hypothetical protein Shew185_2574 3068012 - 3068242 + | hypothetical protein Shew185_2575 3068239 - 3068571 + | GP46 Shew185_2576 3068706 - 3068927 + | hypothetical protein Shew185_2577 3068933 - 3070117 + | hypothetical protein TERM 3561 3070225 - 3070278 + F 100 -16.5 -3.78022 | opp_overlap 3070239, overlap 3070226 3070239 GAATATTAAAATCGG ATTAAAATAAAAAAGCCTGCAAACT ATTA AGTTTACAGGCTTTTTTATTTTGAA TTTGGTCGGTATGAG TERM 3562 3070226 - 3070277 + F 100 -20 -2.86492 | opp_overlap 3070239, overlap 3070225 3070239 AATATTAAAATCGGA TTAAAATAAAAAAGCCTGCAAACT ATTA AGTTTACAGGCTTTTTTATTTTGA ATTTGGTCGGTATGA TERM 3563 3070264 - 3070239 - f 100 -12.7 -5.83211 | opp_overlap 3070239 3070226 3070225 GATTAAAATAAAAAA GCCTGCAAACT ATTA AGTTTACAGGC TTTTTTATTTTGAAT TERM 3564 3070239 - 3070264 + F 100 -10.5 -5.80951 | opp_overlap 3070239, overlap 3070226 3070225 GATTAAAATAAAAAA GCCTGCAAACT ATTA AGTTTACAGGC TTTTTTATTTTGAAT TERM 3565 3071974 - 3071958 - g 73 -2.1 -5.07523 | overlap 3071959 CATAGATAAACAAAA CCTGCAC CAT GAGCAGC AATCTATTTTACTGA Shew185_2578 3070816 - 3073050 + | diguanylate cyclase Shew185_2579 3074762 - 3073284 - | hypothetical protein Shew185_2580 3074948 - 3075430 + | hypothetical protein TERM 3566 3075668 - 3075640 - T 100 -7.6 -5.53079 | gap 2, opp_overlap 3075640 3075667 AAAAGACATAAAAAA GCACTCG-TG-AAC TGA GTTCCAACGAGTGC TTATTCGAGTACGAT Shew185_2581 3076520 - 3075690 - | NAD synthetase TERM 3567 3076682 - 3076650 - R 100 -12.2 -4.89393 | gap 1, opp_overlap 3076654, overlap 3076653 TAAACGTCATAAAAA TAAGGGCAACAACGG TTTG CCGTTATTGCCCT-A GCGTAAATCAGTCAG TERM 3568 3076680 - 3076653 - R 100 -16.4 -4.53475 | opp_overlap 3076654, overlap 3076650 ACGTCATAAAAATAA GGGCAACAACGG TTTG CCGTTATTGCCC TAGCGTAAATCAGTC Shew185_2582 3078026 - 3076722 - | inosine kinase Shew185_2583 3079511 - 3078492 - | ferrochelatase TERM 3569 3079554 - 3079583 + r 83 -12.3 -2.62616 | opp_overlap 3079561, overlap 3079561 CATTGCGATACCCAT AAAAAAAGCCTGC ATCG GCAGGCTTTTTTC TAATATGAGAACTCG TERM 3570 3079561 - 3079576 + r 100 -10.4 -5.34555 | opp_overlap 3079561, overlap 3079554 ATACCCATAAAAAAA GCCTGC ATCG GCAGGC TTTTTTCTAATATGA TERM 3571 3079576 - 3079561 - R 100 -10.4 -5.65177 | opp_overlap 3079561 3079554 ATACCCATAAAAAAA GCCTGC ATCG GCAGGC TTTTTTCTAATATGA Shew185_2584 3080267 - 3079623 - | nucleoside-triphosphate--adenylate kinase Shew185_2585 3081271 - 3080408 - | thioredoxin domain-containing protein TERM 3572 3081286 - 3081317 + r 71 -6.6 -4.11692 | opp_overlap 3081301, overlap 3081289 TAGTATTCCCTTAAC GTTTAAGGCCTC AAACATAG GAGGCCTTATGC TTTTAAAACTAAGTG TERM 3573 3081542 - 3081573 + r 84 -12.4 -3.04026 | gap 1, opp_overlap 3081543, overlap 3081539 CCTGCACTAGAAACA ATATCGGGGCCGTTC AAA GAA-GGCCCCGATAG TCATTTACTTCATGT TERM 3574 3081572 - 3081543 - R 100 -15.9 -4.11183 | gap 1, opp_overlap 3081542 3081539 CTGCACTAGAAACAA TATCGGGGCCGTTC AAA GAA-GGCCCCGATA GTCATTTACTTCATG Shew185_2586 3083491 - 3081578 - | heat shock protein 90 TERM 3575 3082791 - 3082815 + g 80 -4.9 -5.03314 | GCTTTGTTCATGACT TTCCATTGACC TTC GGTCGCAGGAA TTTTTTCGCCATCAG TERM 3576 3082947 - 3082965 + g 71 -8.8 -3.64703 | AATTCTTTTTCTTCA TCACGCAG GTG CAGCGTGA TTTCAGTACCACGGC TERM 3577 3083227 - 3083249 + g 74 -9 -3.69702 | opp_overlap 3083224 AATGCTCAATCACGC CGTCGCGGGT CAT ACCCACGCCG TTGTCTTCGATGGTC TERM 3578 3083641 - 3083611 - R 91 -9.9 -4.62471 | gap 1, opp_overlap 3083614, overlap 3083614 TCGAATGGCGAAAAA TA-AGGCGCTTGAT GAAT ACCAAGCGCCTATA TGTGGACTTTCGTGT TERM 3579 3083637 - 3083614 - R 100 -13.2 -4.42235 | opp_overlap 3083614, overlap 3083611 AATGGCGAAAAATAA GGCGCTTGAT GAAT ACCAAGCGCC TATATGTGGACTTTC TERM 3580 3083614 - 3083637 + r 78 -11 -3.01708 | opp_overlap 3083611 3083614 AATGGCGAAAAATAA GGCGCTTGAT GAAT ACCAAGCGCC TATATGTGGACTTTC TERM 3581 3083685 - 3083699 + r 71 -5 -4.5448 | overlap 3083672 3083676 3083682 GCCTACGCTGAGGCG TTAGTC TTC GGCTAA TTCTTTTTCTAACTG Shew185_2587 3086780 - 3083685 - | acriflavin resistance protein Shew185_2588 3087859 - 3086777 - | RND family efflux transporter MFP subunit TERM 3582 3088207 - 3088192 - R 100 -10.4 -5.4833 | opp_overlap 3088192 GCAGCCAATAAAAAA GGGCGA TAAT TCGCCC TTCTCTCATCAACCG TERM 3583 3088192 - 3088207 + r 79 -10.4 -3.54475 | opp_overlap 3088192 GCAGCCAATAAAAAA GGGCGA TAAT TCGCCC TTCTCTCATCAACCG TERM 3584 3088233 - 3088243 + r 71 -6.8 -4.12603 | opp_overlap 3088233 AACCGTTGAAATTAA CGCA GTT TGCG TTCTTCTTTCATCAG Shew185_2589 3089326 - 3088229 - | NlpB/DapX family lipoprotein Shew185_2590 3090214 - 3089330 - | dihydrodipicolinate synthase TERM 3585 3089448 - 3089436 - G 70 -7.7 -3.94746 | opp_overlap 3089445, overlap 3089445 CCACATTCAATCAAA CCCAT ACG ATGGG CAGCCCATTTAACTG Shew185_2591 3090387 - 3090938 + | amino acid-binding ACT domain-containing protein TERM 3586 3091295 - 3091275 - g 76 -2.5 -5.24129 | overlap 3091276 TGGGGTGAGAAAAAA TTCATGGGT AAA ACCTATGAT GGCATCCACAGATTA Shew185_2592 3090942 - 3091409 + | thioredoxin-dependent thiol peroxidase TERM 3587 3091550 - 3091523 - T 79 -11.4 -2.64912 | opp_overlap 3091528 3091546, overlap 3091528 TCGGCAATCGATAAC GAAAAGGTCCTG AAAT CAGGACCTTTTT CATGAAAAATTTTCA TERM 3588 3091545 - 3091528 - T 93 -11.3 -4.50661 | opp_overlap 3091528, overlap 3091523 AATCGATAACGAAAA GGTCCTG AAAT CAGGACC TTTTTCATGAAAAAT TERM 3589 3091528 - 3091545 + T 95 -11.3 -4.7254 | opp_overlap 3091523 3091528 AATCGATAACGAAAA GGTCCTG AAAT CAGGACC TTTTTCATGAAAAAT Shew185_2593 3092272 - 3091655 - | lysine exporter protein LysE/YggA TERM 3590 3092833 - 3092808 - g 75 -5.3 -4.67353 | overlap 3092809 TCATCTATTGAAAAA CGGTGAAGCGG TCGG CTGCGTCACCA CAACTGAGGTGCCGA Shew185_2594 3092398 - 3093333 + | chromosome replication initiation inhibitor protein TERM 3591 3093475 - 3093502 + T 100 -18.6 -3.04792 | opp_overlap 3093475 GCAGGCATAAAAAAA TCGGGCTCAAAC CAAA GTTTGAGCCCGA TATTGAGAGTCATAG TERM 3592 3093502 - 3093475 - T 100 -18.6 -5.64274 | opp_overlap 3093475 GCAGGCATAAAAAAA TCGGGCTCAAAC CAAA GTTTGAGCCCGA TATTGAGAGTCATAG Shew185_2595 3094428 - 3093565 - | heat shock protein HtpX Shew185_2596 3094715 - 3095428 + | peptidase E TERM 3593 3095494 - 3095467 - f 79 -9.9 -3.66378 | opp_overlap 3095466 3095465 3095463 3095469 CATAGCGCATCTAAA TAGGCTCACAG GAAAAA CGGTGAGCCTA AGTTATTACTTCCTA TERM 3594 3096206 - 3096233 + G 78 -10.8 -3.29144 | opp_overlap 3096200, overlap 3096189 AAGAACTGATCGATC TTGATTTTGTCA CCTA TGGCAAAATCAA TTATCAAGAAAATGC TERM 3595 3096337 - 3096318 - g 100 -9.2 -4.82901 | TTTTCTCTATAAAAA CCTCGTCG ACAT CGACGTGG TCGAAAACAGCAAAG Shew185_2597 3095947 - 3097536 + | glucan biosynthesis protein D TERM 3596 3097630 - 3097611 - T 82 -7.8 -4.64676 | opp_overlap 3097611 GTAGGGTTAATAAAA GCGTCAGT CTTT ACTGGCGC TTTTTTATGCCTAGG TERM 3597 3097611 - 3097630 + T 100 -10 -5.28176 | opp_overlap 3097611 GTAGGGTTAATAAAA GCGTCAGT CTTT ACTGGCGC TTTTTTATGCCTAGG TERM 3598 3098044 - 3098065 + T 100 -14.5 -3.53531 | opp_overlap 3098044 TTCTAGATTCAAAAA GGCCTCAAC TTTC GTTGAGGCC TTATGCTATTCATAC TERM 3599 3098065 - 3098044 - T 100 -14.5 -4.70659 | opp_overlap 3098044 TTCTAGATTCAAAAA GGCCTCAAC TTTC GTTGAGGCC TTATGCTATTCATAC TERM 3600 3098228 - 3098209 - T 100 -12.2 -5.1287 | opp_overlap 3098209 TCCAGATGCAAAAAA GCCTCAAC TTTC GTTGAGGC TTTTTCTTTTTTGGT TERM 3601 3098209 - 3098228 + T 100 -12.2 -5.77571 | opp_overlap 3098209 TCCAGATGCAAAAAA GCCTCAAC TTTC GTTGAGGC TTTTTCTTTTTTGGT TERM 3602 3098281 - 3098301 + T 73 -10.5 -2.89742 | overlap 3098284 GCACGCTGTTACCAG CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 3603 3098284 - 3098298 + T 72 -8.6 -3.5947 | overlap 3098281 CGCTGTTACCAGCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 3604 3098508 - 3098528 + T 73 -10.5 -2.89742 | overlap 3098511 GCACGCTGTTACCAG CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 3605 3098511 - 3098525 + T 72 -8.6 -3.5947 | overlap 3098508 CGCTGTTACCAGCGA GGGATT TTA AATCCC TTGTGTCTACCGATT Shew185_2598 3099565 - 3099017 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Shew185_2599 3101442 - 3099613 - | excinuclease ABC subunit C TERM 3606 3101052 - 3101067 + g 75 -6.1 -4.59773 | opp_overlap 3101051 3101052 CGCCGTTAGGATAAG GGCCA AAATAG TGGCC TTTTTCCCGCTGCGG TERM 3607 3101371 - 3101352 - G 87 -10.8 -4.0641 | CTTTACCCACATAAA TGACGTCA TTCT TGACGTCA TACATGCGATAAACC Shew185_2600 3102190 - 3101546 - | response regulator TERM 3608 3102504 - 3102473 - R 73 -10.3 -2.77013 | opp_overlap 3102480 3102497, overlap 3102480 CATTTCTTGAATAAG CAAAAAAGCCATC GATGCA GATGGCTTTTCCG TGAAATATGGCGGAG TERM 3609 3102497 - 3102480 - R 93 -7 -5.37865 | opp_overlap 3102480, overlap 3102473 TGAATAAGCAAAAAA GCCATC GATGCA GATGGC TTTTCCGTGAAATAT TERM 3610 3102480 - 3102497 + r 73 -7 -4.19258 | opp_overlap 3102473 3102480 TGAATAAGCAAAAAA GCCATC GATGCA GATGGC TTTTCCGTGAAATAT TERM 3611 3102600 - 3102564 - R 100 -16.2 -3.95219 | gap 1, opp_overlap 3102572, overlap 3102556 3102572 TTCAAACTGCACAAA TGCAAAAACGCCGCTAA TAAA TTAGCGGCGTTTTTG-A CTAAATATGGCGGAG TERM 3612 3102593 - 3102572 - R 100 -14.5 -4.84529 | opp_overlap 3102572, overlap 3102564 GCACAAATGCAAAAA CGCCGCTAA TAAA TTAGCGGCG TTTTTGACTAAATAT TERM 3613 3102572 - 3102593 + r 100 -14.5 -4.67755 | opp_overlap 3102564 3102572 GCACAAATGCAAAAA CGCCGCTAA TAAA TTAGCGGCG TTTTTGACTAAATAT TERM 3614 3103135 - 3103102 - R 100 -16.9 -3.9398 | opp_overlap 3103109, overlap 3103109 TGACAACTGCATAAA CGGAAAAGGGCATCA TTGC TGATGGCCTTTTCCG TGAAATATGGCGAAG TERM 3615 3103109 - 3103128 + r 71 -6.4 -4.19258 | opp_overlap 3103102 3103109 TGCATAAACGGAAAA GGGCATCA TTGC TGATGGCC TTTTCCGTGAAATAT TERM 3616 3103128 - 3103109 - R 74 -6.4 -4.39571 | opp_overlap 3103109, overlap 3103102 TGCATAAACGGAAAA GGGCATCA TTGC TGATGGCC TTTTCCGTGAAATAT TERM 3617 3103223 - 3103187 - R 100 -14.8 -4.13767 | gap 1, opp_overlap 3103196, overlap 3103196 GTCTGGAGTTCAAAA TGCAAAAAAGCCGCTAA CAAA TTAGCGGCTTTTTTG-A CTAAATATGGCGGAG TERM 3618 3103215 - 3103196 - R 100 -12.2 -5.2696 | opp_overlap 3103196, overlap 3103187 TCAAAATGCAAAAAA GCCGCTAA CAAA TTAGCGGC TTTTTTGACTAAATA TERM 3619 3103196 - 3103215 + r 100 -12.2 -5.09895 | opp_overlap 3103187 3103196 TCAAAATGCAAAAAA GCCGCTAA CAAA TTAGCGGC TTTTTTGACTAAATA Shew185_2601 3105500 - 3103503 - | methyl-accepting chemotaxis sensory transducer TERM 3620 3104159 - 3104137 - G 100 -12.8 -4.12899 | opp_overlap 3104136 3104137 3104139 ACCACAATTAAAGAA GATTGCGCTG TTG CAGCACAATC ATTAGTGTTATTTGC TERM 3621 3105460 - 3105446 - G 83 -10 -4.25104 | overlap 3105449 GTCCGGTCAGTAAAA GCAGCA CTA TGCTGC CCATAGTGAGCCGCT TERM 3622 3105763 - 3105744 - R 70 -2.8 -5.07011 | TATACAAACCAAAAA GGCCATCA TTGC TAATGCCC TTTATCGTGAATATC Shew185_2602 3106695 - 3105895 - | integrase catalytic region TERM 3623 3105932 - 3105951 + g 100 -10.7 -4.73682 | GGTTGACAGTTTCTA GGCCAGC CCAGTA GCTGGCC TTTTCTATTATGCAC TERM 3624 3106098 - 3106084 - G 71 -4.2 -4.8048 | overlap 3106085 CCGGTAGAGTAAAAA CTCCTG CTT CAGGAT CCCGTTTACTCGTTC TERM 3625 3106437 - 3106487 + g 77 -4.8 -4.8543 | gap 1, overlap 3106440 3106442 CATCGTGTAGTCCCT CTTCCTTCAGCAGGT-TTGGATG TTTCTT CATCCAATGCTTGCTGAATGTCG TTTTTGTGAAGCTTC TERM 3626 3106440 - 3106484 + g 73 -9.5 -3.31915 | gap 1, overlap 3106437 3106442 CGTGTAGTCCCTCTT CCTTCAGCAGGT-TTGGATG TTTCTT CATCCAATGCTTGCTGAATG TCGTTTTTGTGAAGC TERM 3627 3106442 - 3106482 + g 76 -10.7 -3.22077 | gap 1, overlap 3106440 3106437 TGTAGTCCCTCTTCC TTCAGCAGGT-TTGGATG TTTCTT CATCCAATGCTTGCTGAA TGTCGTTTTTGTGAA Shew185_2603 3107156 - 3106761 - | transposase TERM 3628 3107238 - 3107205 - H 100 -15.5 -4.27519 | opp_overlap 3107212, overlap 3107212 ACGGGACAATACAAA CAAAAAAGGCCATCA TTGC TGATGGCCTTTCTCG TGAATATCGCGCAGG TERM 3629 3107231 - 3107212 - H 100 -12.2 -5.7827 | opp_overlap 3107212, overlap 3107205 AATACAAACAAAAAA GGCCATCA TTGC TGATGGCC TTTCTCGTGAATATC TERM 3630 3107212 - 3107231 + H 91 -12.2 -3.98661 | opp_overlap 3107205 3107212 AATACAAACAAAAAA GGCCATCA TTGC TGATGGCC TTTCTCGTGAATATC TERM 3631 3107424 - 3107391 - H 100 -15.5 -4.17516 | opp_overlap 3107398, overlap 3107398 TTTAAATTATACAAA CAAAAAAGGCCATCA TTGC TGATGGCCTTTCTCG TGAATATGGCGCAGG TERM 3632 3107398 - 3107417 + H 91 -12.2 -3.98661 | opp_overlap 3107391 3107398 TATACAAACAAAAAA GGCCATCA TTGC TGATGGCC TTTCTCGTGAATATG TERM 3633 3107417 - 3107398 - H 100 -12.2 -5.76237 | opp_overlap 3107398, overlap 3107391 TATACAAACAAAAAA GGCCATCA TTGC TGATGGCC TTTCTCGTGAATATG TERM 3634 3107518 - 3107484 - H 100 -13.9 -3.95219 | gap 1, opp_overlap 3107491, overlap 3107485 3107491 TTCAAATTGTATAAA TGCAAAATGCCGCTAA TTGC TTAGCGGCATTTTG-A CTAAATATGGCGGAG TERM 3635 3107518 - 3107485 - H 100 -15.5 -2.9665 | opp_overlap 3107491, overlap 3107484 3107491 TCAAATTGTATAAAT GCAAAATGCCGCTAA TTGC TTAGCGGCATTTTGA CTAAATATGGCGGAG TERM 3636 3107512 - 3107491 - H 100 -13.1 -4.39571 | opp_overlap 3107491, overlap 3107484 3107485 TGTATAAATGCAAAA TGCCGCTAA TTGC TTAGCGGCA TTTTGACTAAATATG TERM 3637 3107491 - 3107512 + H 100 -13.1 -4.20531 | opp_overlap 3107484 3107485 3107491 TGTATAAATGCAAAA TGCCGCTAA TTGC TTAGCGGCA TTTTGACTAAATATG Shew185_2604 3107838 - 3109571 + | ATP-dependent protease Shew185_2605 3109646 - 3110161 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 3638 3110228 - 3110211 - T 95 -11.3 -5.03994 | opp_overlap 3110210 CTGCAGATATAAAAA TGCCCTC ATCT GAGGGCA ATATGCTGCATTACT Shew185_2606 3110461 - 3110285 - | ribosome modulation factor TERM 3639 3110601 - 3110619 + r 100 -10.3 -5.58454 | opp_overlap 3110601 CCTAGCGAAAAAAAA TCGAGGC ATTTA GCCTCGA TTTTTTTAGTCTGAA TERM 3640 3110619 - 3110601 - R 100 -10.3 -5.81412 | opp_overlap 3110601 CCTAGCGAAAAAAAA TCGAGGC ATTTA GCCTCGA TTTTTTTAGTCTGAA Shew185_2607 3112475 - 3110649 - | hypothetical protein TERM 3641 3111471 - 3111448 - G 73 -10.4 -3.26471 | opp_overlap 3111444 3111451, overlap 3111451 GTATCTTTAGACCAA TAAGCTGCAT CTTG ACGCAGCTTA TCAGTGTTGTTATTA Shew185_2608 3114429 - 3112504 - | ABC transporter ATPase component TERM 3642 3113175 - 3113194 + g 83 -7.2 -4.74103 | ATATGTGGCGGTCTT GACCATTA ATCG TGATGGTC TTTTTACCTTCACCA Shew185_2609 3114685 - 3114431 - | glutaredoxin 2 Shew185_2610 3116807 - 3114678 - | 23S rRNA m(2)G2445 methyltransferase TERM 3643 3116576 - 3116557 - G 75 -5.7 -4.62069 | opp_overlap 3116564 CTTTTATTGGAAAAA TGTGCCG GCCAAT CGACACA ATAGGCTGCATTATA TERM 3644 3117831 - 3117844 + r 100 -8.1 -5.76633 | opp_overlap 3117831 CCGCAACCAATTTAA CCAGC ATAT GCTGG TTTTTTTGTATCTAA Shew185_2611 3118422 - 3118009 - | hypothetical protein Shew185_2612 3119159 - 3118668 - | GCN5-related N-acetyltransferase TERM 3645 3119488 - 3119513 + r 77 -9.8 -3.56643 | gap 1, opp_overlap 3119488 CTGGGCAAATAAAAA CCCGCTCAAGA TAGGT TCTTG-GCGGG TTTAAGGGATATCGC TERM 3646 3119513 - 3119488 - R 100 -9.8 -5.27335 | gap 1, opp_overlap 3119488 CTGGGCAAATAAAAA CCCGCTCAAGA TAGGT TCTTG-GCGGG TTTAAGGGATATCGC Shew185_2613 3120219 - 3119620 - | recombination protein RecR Shew185_2614 3120597 - 3120232 - | hypothetical protein Shew185_2615 3124198 - 3120785 - | DNA polymerase III, subunits gamma and tau TERM 3647 3124204 - 3124176 - G 74 -9 -3.62591 | overlap 3124181 CCGAGAACTTTGAAA GATAACATGTCA TGATT TGACATGCCATC AAACTATCCCAAGGC Shew185_2616 3124790 - 3124236 - | adenine phosphoribosyltransferase TERM 3648 3124869 - 3124851 - R 100 -10.3 -5.18371 | opp_overlap 3124850 3124849 CGGTATAAAACAAAA CGTCCAC ACTGG GTGGACG CATTGTCGAAAGTCG Shew185_2617 3125423 - 3125055 - | hypothetical protein TERM 3649 3125472 - 3125456 - R 100 -12.3 -5.3658 | ATCAGAAAAACAAAA GCCACTC TAA GAGTGGC CAATAGTCTATGCGC Shew185_2618 3125627 - 3125505 - | hypothetical protein Shew185_2619 3126524 - 3125778 - | hypothetical protein Shew185_2620 3127390 - 3126524 - | hypothetical protein TERM 3650 3127463 - 3127432 - R 100 -13.8 -4.46212 | opp_overlap 3127437, overlap 3127437 CGCTTTAGGATAAAA CAAAAGAGACCAGC GCGG GCTGGCCTCTTTAG ACTCAATAACCCCCA TERM 3651 3127437 - 3127458 + r 79 -10.1 -3.61178 | opp_overlap 3127437 3127432 TAGGATAAAACAAAA GAGACCAGC GCGG GCTGGCCTC TTTAGACTCAATAAC TERM 3652 3127458 - 3127437 - R 100 -12.3 -5.20781 | opp_overlap 3127437, overlap 3127432 TAGGATAAAACAAAA GAGACCAGC GCGG GCTGGCCTC TTTAGACTCAATAAC Shew185_2621 3127936 - 3127505 - | hypothetical protein TERM 3653 3128456 - 3128444 - g 78 -9.1 -4.09864 | ATGTATGGGTGAAAA TGCCC TGC GGGCA ATTGAACTCGGCTCA Shew185_2622 3128205 - 3129158 + | dihydrouridine synthase DuS Shew185_2623 3129406 - 3129765 + | TraR/DksA family transcriptional regulator TERM 3654 3129819 - 3129834 + T 84 -10.4 -3.80625 | opp_overlap 3129819 AAATAAGCAAAAAAA CCTCCG CAAG CGGAGG TTTGAGTTATCCAGG TERM 3655 3129834 - 3129819 - T 100 -10.4 -5.73672 | opp_overlap 3129819 AAATAAGCAAAAAAA CCTCCG CAAG CGGAGG TTTGAGTTATCCAGG Shew185_2624 3132523 - 3129863 - | TonB-dependent receptor TERM 3656 3130062 - 3130077 + g 76 -2.5 -5.28778 | opp_overlap 3130054, overlap 3130063 AAGTAATTATCGTAA TCGAC ATAACG GTCGG TTTTTTCTAACTCGT TERM 3657 3132540 - 3132558 + r 75 -5.4 -4.67478 | opp_overlap 3132544, overlap 3132544 AATCTCTCCTTGAGG TAAACAAA ACC TTTGTTTG TTATTTTTATATTTA TERM 3658 3132923 - 3132904 - R 100 -12.2 -5.52023 | opp_overlap 3132904 ATTAGTAATAAAAAA TGCCACTC AATT GAGTGGCA TTTATATTTAAACAC TERM 3659 3132904 - 3132923 + r 95 -12.2 -4.32857 | opp_overlap 3132904 ATTAGTAATAAAAAA TGCCACTC AATT GAGTGGCA TTTATATTTAAACAC Shew185_2625 3134675 - 3132957 - | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 3660 3135013 - 3134985 - R 70 -3.2 -4.96028 | gap 1 CCCCAAAAAAAACAA GCATG-GGCAATT TTTA ATTTACCGCATGC TGCTTTTATCAGCAA Shew185_2626 3135710 - 3135039 - | carboxylesterase Shew185_2627 3136031 - 3135804 - | hypothetical protein TERM 3661 3136788 - 3136801 + G 75 -5.3 -4.68724 | opp_overlap 3136788 CCTGAGCAAACCCAA GGTAA ACAG TTACC TTTTATGTTCAGTCA TERM 3662 3137143 - 3137122 - g 78 -8.1 -4.34345 | gap 1 CAGAGATGATCAAAA TCGCCGCTAA ACG TTA-CGGCGA TTACCGTTGGGGACG Shew185_2628 3136284 - 3138227 + | peptidase M1 membrane alanine aminopeptidase TERM 3663 3138287 - 3138316 + T 83 -12.3 -2.50438 | opp_overlap 3138292, overlap 3138292 TGCACCATAAAAACA AAAAAGCCCAAAC CTAG GTTTGGGCTTTTG CTATTCAATCTTTAG TERM 3664 3138311 - 3138292 - T 100 -12.2 -5.98675 | opp_overlap 3138292 3138287 CATAAAAACAAAAAA GCCCAAAC CTAG GTTTGGGC TTTTGCTATTCAATC TERM 3665 3138292 - 3138311 + T 95 -12.2 -4.43681 | opp_overlap 3138292, overlap 3138287 CATAAAAACAAAAAA GCCCAAAC CTAG GTTTGGGC TTTTGCTATTCAATC Shew185_2629 3138911 - 3138423 - | peptidylprolyl isomerase FKBP-type TERM 3666 3138724 - 3138761 + g 75 -11.5 -2.52681 | gap 1, opp_overlap 3138730 3138734, overlap 3138723 3138730 TATGTTTCGGCAGCA GGTAAAGTCA-CAGTGAA CTT TTCACCGATGGCTTTACC ATTGATCGCGTTTTC Shew185_2630 3140348 - 3139032 - | lytic murein transglycosylase TERM 3667 3139377 - 3139356 - G 83 -7.2 -4.78149 | overlap 3139357 CTCATAACCTAAAAA GGCAGGCC CTGTGT GGCCTGCA GGTAAATACAGCGCG TERM 3668 3139376 - 3139357 - G 79 -10.7 -3.46167 | overlap 3139356 TCATAACCTAAAAAG GCAGGCC CTGTGT GGCCTGC AGGTAAATACAGCGC TERM 3669 3139964 - 3139982 + g 78 -12.4 -2.50291 | overlap 3139963 GACGGCCTTCATTGA CGCGCCAT TCG GTGGCGCG CTTACTGAAATAATT TERM 3670 3140711 - 3140700 - H 75 -3 -5.29716 | CCAACACAAGAAAAA TCTT AACA AAGA ATCCCTTGGTATCGC TERM 3671 3140854 - 3140831 - g 72 -6 -4.32905 | AAAAATGTAAAACAA CATCAGACGC TTTG GGGTCTAATG GATGAAACTGGCGAA Shew185_2631 3140780 - 3141139 + | hypothetical protein TERM 3672 3141161 - 3141195 + F 100 -18.8 -2.6381 | opp_overlap 3141151 3141169, overlap 3141163 3141165 3141169 3141173 CAATATGCCATTAGT GACATCAAGGACTGAG GTG CTCATTCCTTGATGTC TGCTATCCCGCTTAT TERM 3673 3141163 - 3141193 + F 95 -15.6 -2.85847 | opp_overlap 3141151 3141169, overlap 3141161 3141165 3141169 3141173 ATATGCCATTAGTGA CATCAAGGACTGAG GTG CTCATTCCTTGATG TCTGCTATCCCGCTT TERM 3674 3141165 - 3141191 + F 84 -12.4 -2.97747 | opp_overlap 3141169, overlap 3141163 3141161 3141169 3141173 ATGCCATTAGTGACA TCAAGGACTGAG GTG CTCATTCCTTGA TGTCTGCTATCCCGC Shew185_2632 3141191 - 3141832 + | hypothetical protein Shew185_2633 3142961 - 3142017 - | putative CheW protein TERM 3675 3143191 - 3143177 - R 70 -8.6 -3.36569 | opp_overlap 3143177, overlap 3143175 TCAAGCGGCGAAATA GCCAAA ACA TTTGGC TTTGGCATAAGTATG TERM 3676 3143177 - 3143191 + r 72 -8.6 -3.61654 | opp_overlap 3143175 3143177 TCAAGCGGCGAAATA GCCAAA ACA TTTGGC TTTGGCATAAGTATG Shew185_2634 3143892 - 3143278 - | methyltransferase type 11 Shew185_2635 3143994 - 3144545 + | peptidase S16 lon domain-containing protein Shew185_2636 3144691 - 3145353 + | ECF subfamily RNA polymerase sigma-24 factor Shew185_2637 3145346 - 3146068 + | anti-ECFsigma factor, ChrR TERM 3677 3146161 - 3146189 + F 100 -14.1 -5.66338 | opp_overlap 3146161 AATGACAGCCATTAA TCCCATTGAAATA ACC TATTTCAGTGGGA TTTTTTATTCTATTT TERM 3678 3146189 - 3146161 - f 83 -11.9 -3.21126 | opp_overlap 3146161 AATGACAGCCATTAA TCCCATTGAAATA ACC TATTTCAGTGGGA TTTTTTATTCTATTT Shew185_2638 3146861 - 3147034 + | hypothetical protein Shew185_2639 3147335 - 3147595 + | hypothetical protein Shew185_2640 3148672 - 3147626 - | hypothetical protein TERM 3679 3148195 - 3148183 - G 73 -4.7 -4.82901 | CCTCTGGGATAAAAA GCGCC GTC GGCTC ATTCGCGAGTACCTG TERM 3680 3149035 - 3149049 + G 78 -7.8 -4.40572 | ACTCGCTTGGTGGCT CGCAGG TAT CCTGTG TTTTATCAGCATTAT Shew185_2641 3148958 - 3149365 + | hypothetical protein Shew185_2642 3150325 - 3149396 - | alpha/beta hydrolase fold Shew185_2643 3151350 - 3150322 - | zinc carboxypeptidase-related protein TERM 3681 3150813 - 3150780 - G 76 -8.9 -3.91911 | overlap 3150782 3150785 CGTAGGGGAACCAAA TATGATCACTCAAGC CAAA GCCTGAGTGAGCATC GAGGGAAATCAAACT TERM 3682 3150811 - 3150782 - G 83 -11.5 -3.5486 | overlap 3150780 3150785 TAGGGGAACCAAATA TGATCACTCAAGC CAAA GCCTGAGTGAGCA TCGAGGGAAATCAAA TERM 3683 3150808 - 3150785 - G 76 -11.8 -2.90199 | overlap 3150782 3150780 GGGAACCAAATATGA TCACTCAAGC CAAA GCCTGAGTGA GCATCGAGGGAAATC Shew185_2644 3152271 - 3151525 - | ABC transporter Shew185_2645 3152542 - 3152769 + | hypothetical protein TERM 3684 3152883 - 3152859 - T 100 -17.3 -4.70772 | overlap 3152849 ATAGACTGAATAAAA TTCAAGCCGCA TTG TGCGGCTTGAA AGCCAAAAAAGCAGG Shew185_2646 3154629 - 3152917 - | acyl-CoA synthetase TERM 3685 3153714 - 3153697 - G 71 -6.3 -4.15788 | gap 1 AAGCTCGGCAATAAA CATGGTCG GTA CG-CCATG TAAAGCGGTGCACCC Shew185_2647 3155149 - 3154769 - | hypothetical protein Shew185_2648 3155427 - 3155888 + | hypothetical protein TERM 3686 3156203 - 3156191 - g 79 -3.3 -5.24129 | opp_overlap 3156194 GGTTGGCAGAAAAAA CTCCA TCG TGGTG ATGTGCTTGAGCATG Shew185_2649 3156011 - 3156355 + | hypothetical protein Shew185_2650 3156866 - 3158140 + | hypothetical protein TERM 3687 3158223 - 3158196 - T 93 -9.9 -4.8622 | opp_overlap 3158200 CCTTGCAACTAAAAA GGCATCCCAGA GGATTA TCTGGCATGCC TTAAGAAGAGACAGC Shew185_2651 3159083 - 3158289 - | hypothetical protein TERM 3688 3158739 - 3158725 - G 81 -5.7 -5.00616 | GCCGCCGCTAAAAAA CTGTC CTTCT GACAG ATAAGCTCGCCACCA TERM 3689 3158919 - 3158907 - G 100 -9.1 -5.03145 | overlap 3158909 CAACTTGCCAAAAAA GCCTG ACT CAGGC TCTGAGCCATCGCCC Shew185_2652 3160179 - 3159265 - | LysR family transcriptional regulator TERM 3690 3161411 - 3161390 - g 75 -5.1 -4.80882 | gap 1, overlap 3161391 3161392 ACCTTACATCAAAAA GGTGTG-GCC CAC GGCCCACAAC CGGGCCGCACTGAAG Shew185_2653 3160394 - 3161554 + | homogentisate 12-dioxygenase TERM 3691 3161731 - 3161752 + G 78 -5.9 -4.68593 | opp_overlap 3161736, overlap 3161732 ATACTGATTTTATGC ACAAAGTCT TTAT AGACTTTGG TTTTTCACTGCTGAA TERM 3692 3161808 - 3161786 - g 91 -6.4 -5.30348 | overlap 3161780 AGCCAAGAACAAAAA CATTCTGT ACTACAA ACAGAATG ACATTAATTTTCTGC Shew185_2654 3161652 - 3162692 + | 4-hydroxyphenylpyruvate dioxygenase TERM 3693 3162716 - 3162734 + T 100 -14.6 -5.38054 | opp_overlap 3162716 CCTGCTAATAAAAAA CGGTACGC ACT GCGTACCG TTTTTGTTTCTACGA TERM 3694 3162734 - 3162716 - T 100 -14.6 -5.4505 | opp_overlap 3162716 CCTGCTAATAAAAAA CGGTACGC ACT GCGTACCG TTTTTGTTTCTACGA Shew185_2655 3163401 - 3162817 - | transferase hexapeptide repeat containing protein Shew185_2656 3163748 - 3164371 + | lysine exporter protein LysE/YggA TERM 3695 3164458 - 3164500 + T 87 -6.4 -5.24129 | gap 1, opp_overlap 3164458 GCACGACATAAATGA GAGCCC-AATAAAGCCCCG TTAACT CGGTCTTTTATTAGGGCTC TTTTTTGTAGGGCAA Shew185_2657 3165904 - 3164492 - | hypothetical protein Shew185_2658 3166013 - 3167752 + | gamma-glutamyltransferase TERM 3696 3167864 - 3167830 - f 100 -12.4 -4.6468 | GTAAATGAGATAAAA GGATTTATGACCTA TTCGATC TAGGTCATAAACCC TGAGTAAAACTTGTC TERM 3697 3167958 - 3167901 - f 100 -14.7 -4.2772 | gap 2, opp_overlap 3167915, overlap 3167915 CTCAACGAATACAAA CTCACAATCAAAAAGCCCTGCTATATA TCACTG TATA-AGCAGGGCTTTTT-ATTGTGTG GAAACAAGTAATCGT TERM 3698 3167915 - 3167945 + F 100 -9.9 -5.24796 | gap 1, opp_overlap 3167901 3167915 ACTCACAATCAAAAA GCCCTGCTATATAT CACT GTATA-AGCAGGGC TTTTTATTGTGTGGA TERM 3699 3167945 - 3167915 - f 90 -9.2 -4.93968 | gap 1, opp_overlap 3167915, overlap 3167901 ACTCACAATCAAAAA GCCCTGCTATATA TCACTG TATA-AGCAGGGC TTTTTATTGTGTGGA TERM 3700 3168129 - 3168162 + F 83 -12.3 -2.80816 | overlap 3168132 CAGTCCGTCCGTGGA TGCTCGACCGCCCCA TCCA TGGGGCGGACGGTCG TCTCGTAAATCACCA TERM 3701 3168132 - 3168159 + F 95 -14.8 -2.66964 | overlap 3168129 TCCGTCCGTGGATGC TCGACCGCCCCA TCCA TGGGGCGGACGG TCGTCTCGTAAATCA Shew185_2659 3168540 - 3170186 + | ATP-dependent OLD family endonuclease Shew185_2660 3172191 - 3170548 - | hypothetical protein TERM 3702 3174299 - 3174283 - g 74 -6.5 -4.45664 | GCAAGTGAATGAAAA CTGGATG ACT CAGCCAG AAGTGTTAGCCCAAT Shew185_2661 3172601 - 3174805 + | peptidyl-dipeptidase Dcp TERM 3703 3174865 - 3174842 - f 90 -11 -4.25401 | opp_overlap 3174845, overlap 3174845 CAAAGGCAAGATAAA CAACGGGAGC TTCG GCTCCCGTTT TCTTATAATTTTATT TERM 3704 3174862 - 3174845 - f 100 -12.7 -4.22375 | opp_overlap 3174845, overlap 3174842 AGGCAAGATAAACAA CGGGAGC TTCG GCTCCCG TTTTCTTATAATTTT TERM 3705 3174845 - 3174862 + F 100 -12.7 -4.88258 | opp_overlap 3174842 3174845 AGGCAAGATAAACAA CGGGAGC TTCG GCTCCCG TTTTCTTATAATTTT TERM 3706 3176119 - 3176101 - g 74 -3.8 -4.8667 | GAGATGGTAGAAAAA GCAGATCA TCT TAGTCTGC TCGATATTTGGGAAG Shew185_2662 3176074 - 3176526 + | GCN5-related N-acetyltransferase Shew185_2663 3176527 - 3176910 + | GCN5-related N-acetyltransferase TERM 3707 3177095 - 3177070 - T 100 -10.5 -5.5353 | opp_overlap 3177070 GACATCAATAAAAAA GGCTTGCTAAG TTTC CCTAACAAGCC TTTGGGCCTTTTTAC Shew185_2664 3179265 - 3177121 - | peptidyl-dipeptidase Dcp TERM 3708 3179241 - 3179228 - G 72 -5.9 -4.3255 | opp_overlap 3179228, overlap 3179224 GCGCCAAGTAACAAA GCCGC GGCC ACGGC TGTGGTAATAACGGA TERM 3709 3180483 - 3180466 - g 77 -2.7 -5.23016 | AAAGAAGTTAAAAAA GGTGA GCATTTAT TCACC CCTTATATCATCAAA Shew185_2665 3179974 - 3182019 + | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 3710 3182051 - 3182065 + F 93 -7.1 -5.4833 | opp_overlap 3182051, overlap 3182042 3182044 TATCATGCTCAAAAA GGCTC TTCGT GAGCC TTTTTTATTCCCTAC TERM 3711 3182065 - 3182051 - f 81 -7.1 -4.60487 | opp_overlap 3182042 3182051 3182044 TATCATGCTCAAAAA GGCTC TTCGT GAGCC TTTTTTATTCCCTAC Shew185_2666 3182227 - 3182985 + | hypothetical protein TERM 3712 3183243 - 3183261 + T 77 -10.3 -3.39856 | opp_overlap 3183243 TCTAGACGCAAAAAA GCCAGCT TATTC AGCTGGC TTCGTTACATCTCTA TERM 3713 3183261 - 3183243 - T 93 -10.3 -5.1287 | opp_overlap 3183243 TCTAGACGCAAAAAA GCCAGCT TATTC AGCTGGC TTCGTTACATCTCTA TERM 3714 3184717 - 3184728 + T 72 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTGC TGTG TTTTTGATAAACAGT TERM 3715 3185234 - 3185250 + T 86 -9.4 -4.08546 | overlap 3185216 TTGGTCTTTCGGCGA GGGGGT TTTTC ACCCCC TTTATCGTTACTCAT TERM 3716 3186030 - 3186042 + T 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 3717 3186548 - 3186518 - T 71 -9.8 -2.90194 | opp_overlap 3186536 3186540 3186541, overlap 3186521 3186527 AGTCGCTTAACCATA CAACCCAAATGAGT TTC ACTCACCTGAGTCG CATTGCGACCAGCTT TERM 3718 3186612 - 3186639 + T 72 -4.3 -4.74706 | GGACGCGCCTTAGAC GTAAACTATTC AACTAA GAATAATTTAC TTTTTGAATATTCAA TERM 3719 3186822 - 3186792 - T 90 -8.5 -5.00884 | opp_overlap 3186791 AGCGGGCTTAAAAAA GCCAAAGATAA TTTTTAAGT TTATCTTTGGC ATCTCTATCCATAGT TERM 3720 3189271 - 3189294 + T 79 -8.3 -4.08394 | AAAACGATTCAAGCG CACACTTTT TAAACT AAAAGTGTG TTTTAACGCCAATAT TERM 3721 3189391 - 3189370 - T 83 -10.9 -3.64915 | opp_overlap 3189370, overlap 3189364 CGCTAGAAATGACAA GAGCCAACC TATT GGTTAGCTC TTTATGCCATGTTGG TERM 3722 3189370 - 3189391 + T 77 -8.7 -3.92602 | opp_overlap 3189364 3189370 CGCTAGAAATGACAA GAGCCAACC TATT GGTTAGCTC TTTATGCCATGTTGG Shew185_2667 3190081 - 3189533 - | D,D-heptose 1,7-bisphosphate phosphatase Shew185_2668 3190550 - 3191221 + | GntR family transcriptional regulator TERM 3723 3191270 - 3191289 + F 93 -5.6 -5.63517 | opp_overlap 3191270 TTGTTGTCGATTCAA GGCAGCGC TCAG GTTCTGCC TTTTTTATTTGAGAG Shew185_2669 3191313 - 3192380 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3724 3192449 - 3192420 - T 77 -8 -4.25104 | opp_overlap 3192426, overlap 3192426 CGTGTTTTACTAAAA CAAAAAGCCATC TTAATC GATGGCTTTTTT AGTTTATGACGACAG TERM 3725 3192443 - 3192426 - T 93 -7 -5.50723 | opp_overlap 3192426, overlap 3192420 TTACTAAAACAAAAA GCCATC TTAATC GATGGC TTTTTTAGTTTATGA TERM 3726 3192426 - 3192443 + T 93 -7 -5.42514 | opp_overlap 3192420 3192426 TTACTAAAACAAAAA GCCATC TTAATC GATGGC TTTTTTAGTTTATGA Shew185_2670 3193064 - 3192468 - | hypothetical protein Shew185_2671 3194006 - 3193320 - | exonuclease RNase T and DNA polymerase III Shew185_2672 3195855 - 3194008 - | signal-transduction protein TERM 3727 3196021 - 3196040 + r 70 -7.8 -3.71552 | opp_overlap 3196023, overlap 3196023 AAATGCGCAATAAAA AAGAGCGC CGAA GCGCTCTC TTGTGTTGATGCAAT TERM 3728 3196023 - 3196038 + r 77 -10.4 -3.43722 | opp_overlap 3196023, overlap 3196021 ATGCGCAATAAAAAA GAGCGC CGAA GCGCTC TCTTGTGTTGATGCA TERM 3729 3196038 - 3196023 - R 100 -10.4 -5.45652 | opp_overlap 3196023 3196021 ATGCGCAATAAAAAA GAGCGC CGAA GCGCTC TCTTGTGTTGATGCA Shew185_2673 3197807 - 3196071 - | Na+/solute symporter TERM 3730 3197008 - 3196993 - G 71 -4.6 -4.53602 | overlap 3196994 3196995 GGTACAGTAAAGAAA CGCACG ATAA CGTGGG GTAAACCCGCAGTAC TERM 3731 3197268 - 3197252 - G 72 -5.9 -4.37711 | CCATGAAAGCGAAAA TCAATAC ACA GTACTGA GCAACCTGAGTGTAA TERM 3732 3197665 - 3197634 - G 77 -6.5 -4.56702 | gap 1 CGCTAATGAAATAAA CGACGCCG-CCGAC ATCCA GTCCGCCGCCGTCG CCATACCGTTAACAA Shew185_2674 3198085 - 3197819 - | hypothetical protein TERM 3733 3198624 - 3198603 - R 100 -11.7 -5.16572 | opp_overlap 3198606 ATTTAAGGCAAAAAA TAACCCAAC CTAG GTTGGGTTA TTAACGCTGGATTAG TERM 3734 3198606 - 3198621 + r 76 -9 -3.63694 | opp_overlap 3198603 TAAGGCAAAAAATAA CCCAAC CTAG GTTGGG TTATTAACGCTGGAT Shew185_2675 3199347 - 3198727 - | DSBA oxidoreductase Shew185_2676 3200333 - 3199470 - | NAD-dependent epimerase/dehydratase Shew185_2677 3201595 - 3200390 - | metal dependent phosphohydrolase TERM 3735 3201649 - 3201634 - R 73 -7.6 -4.0942 | GATGCAGGACATAAA CAGATG ACCT CATCTG CGTATCCAACAGGGC TERM 3736 3201782 - 3201743 - R 88 -11.5 -3.75863 | opp_overlap 3201743 AAAATCCTTATCAAA CTGAGGCATAAGACACA TTAATT TGTGCCCTGCGCCTCAG TGTTAAATAAAGGGA TERM 3737 3201817 - 3201835 + r 87 -6 -5.35365 | opp_overlap 3201816 3201819 ATAACAATAGGATAG GAGCTTAA GAC TGAAGCTC TTTTTGTTCTATTTT Shew185_2678 3202330 - 3201821 - | hypothetical protein TERM 3738 3202441 - 3202462 + r 91 -13.1 -3.09635 | opp_overlap 3202441, overlap 3202443 TCGGGCAAATAAAAA TAGCGCCTT GGGC AAGGCGCTA TTCAATGCTCACGAT TERM 3739 3202462 - 3202441 - R 100 -13.1 -5.27335 | opp_overlap 3202441 3202443 TCGGGCAAATAAAAA TAGCGCCTT GGGC AAGGCGCTA TTCAATGCTCACGAT TERM 3740 3202443 - 3202460 + r 82 -11.3 -3.10796 | opp_overlap 3202441, overlap 3202441 GGGCAAATAAAAATA GCGCCTT GGGC AAGGCGC TATTCAATGCTCACG Shew185_2679 3204604 - 3202547 - | DNA ligase, NAD-dependent TERM 3741 3202897 - 3202877 - G 87 -6.8 -5.14563 | opp_overlap 3202887 CGGCTGAGCAAAAAA GTGGGCCA CATGT TGGGCCAC CACGGCGCCAACATC TERM 3742 3204675 - 3204653 - R 100 -14.9 -5.34555 | opp_overlap 3204649 GTAGATCACAAAAAA TGAGGCCGC AATTA GCGGCCTCA TCAATATATAAACCG Shew185_2680 3205778 - 3204708 - | cell division protein ZipA Shew185_2681 3209218 - 3205802 - | chromosome segregation protein SMC Shew185_2682 3209440 - 3210219 + | putative sulfate transport protein CysZ TERM 3743 3210267 - 3210315 + T 83 -6.2 -5.14163 | gap 1, opp_overlap 3210277 3210283, overlap 3210277 3210283 3210303 GGGTTTGATATCAAT TCCTGCAACATAAAAACAGCCTC AATT GAGGCTGTTTTTAT-TGATAGGC TTTTTATTAATAAAT TERM 3744 3210277 - 3210306 + T 100 -16.7 -3.23009 | opp_overlap 3210277 3210283, overlap 3210267 3210283 3210303 TCAATTCCTGCAACA TAAAAACAGCCTC AATT GAGGCTGTTTTTA TTGATAGGCTTTTTA TERM 3745 3210306 - 3210277 - T 100 -16.7 -3.03159 | opp_overlap 3210277 3210267 3210283 3210303, overlap 3210283 TCAATTCCTGCAACA TAAAAACAGCCTC AATT GAGGCTGTTTTTA TTGATAGGCTTTTTA TERM 3746 3210300 - 3210283 - T 95 -11.3 -5.0916 | opp_overlap 3210283 3210277 3210267, overlap 3210277 CCTGCAACATAAAAA CAGCCTC AATT GAGGCTG TTTTTATTGATAGGC TERM 3747 3210283 - 3210300 + T 95 -11.3 -5.1356 | opp_overlap 3210277 3210283, overlap 3210277 3210267 CCTGCAACATAAAAA CAGCCTC AATT GAGGCTG TTTTTATTGATAGGC Shew185_2683 3211514 - 3210393 - | 3-oxoacyl-(acyl carrier protein) synthase III Shew185_2684 3212758 - 3211511 - | RDD domain-containing protein Shew185_2685 3213010 - 3213978 + | cysteine synthase A TERM 3748 3213997 - 3214028 + F 100 -13.2 -3.9279 | opp_overlap 3214003, overlap 3214003 ATGTTGGATTACCCT TTAAAATACCCAGC CTCT GCTGGGTATTTTTA TTTGTGGCATTGCAT TERM 3749 3214022 - 3214003 - f 91 -12.2 -4.10161 | opp_overlap 3214003 3213997 GATTACCCTTTAAAA TACCCAGC CTCT GCTGGGTA TTTTTATTTGTGGCA TERM 3750 3214003 - 3214022 + F 100 -12.2 -5.38054 | opp_overlap 3214003, overlap 3213997 GATTACCCTTTAAAA TACCCAGC CTCT GCTGGGTA TTTTTATTTGTGGCA Shew185_2686 3214182 - 3215255 + | O-methyltransferase family protein TERM 3751 3215539 - 3215573 + G 70 -10 -3.18023 | overlap 3215537 3215545 ACTTAATGGCGCAGG GCAACTCACAGGCG CCATCAT CGCCTCTGTGTTGC TGTTACTGCTCATGG TERM 3752 3215892 - 3215903 + G 71 -4.4 -4.77757 | CTGACTACCAATGGC TAGC AAAC GCTA TTTTGGTTTTTGGAA TERM 3753 3216011 - 3216027 + G 70 -7.9 -3.91897 | overlap 3216020 CCAACCATTGCGATT CTCGCGG CGC CCGCCAG TTTATCACTCGCAGG Shew185_2687 3215408 - 3216406 + | C4-dicarboxylate transporter/malic acid transport protein TERM 3754 3216509 - 3216474 - f 100 -17.2 -3.01766 | opp_overlap 3216474 3216479, overlap 3216479 AACTAGACCATAAAC CAAAAGGAAGGTGAAT ATAT ATTCACCTTCCTTTTA TATTTAAGCTATTTC TERM 3755 3216474 - 3216509 + F 100 -15 -3.42373 | opp_overlap 3216474 3216479, overlap 3216479 AACTAGACCATAAAC CAAAAGGAAGGTGAAT ATAT ATTCACCTTCCTTTTA TATTTAAGCTATTTC TERM 3756 3216504 - 3216479 - f 100 -14.9 -4.63479 | opp_overlap 3216479 3216474, overlap 3216474 GACCATAAACCAAAA GGAAGGTGAAT ATAT ATTCACCTTCC TTTTATATTTAAGCT TERM 3757 3216479 - 3216504 + F 100 -14.9 -4.79451 | opp_overlap 3216474 3216479, overlap 3216474 GACCATAAACCAAAA GGAAGGTGAAT ATAT ATTCACCTTCC TTTTATATTTAAGCT Shew185_2688 3217097 - 3219871 + | TonB-dependent receptor TERM 3758 3219900 - 3219929 + T 100 -12.3 -4.84642 | opp_overlap 3219906, overlap 3219906 AATTAGAACCTAATC AAAAAACGGCATC TTCT GATGCCGTTTTTA TTTTCTTCATTTACG TERM 3759 3219906 - 3219923 + T 100 -11.3 -5.62288 | opp_overlap 3219906, overlap 3219900 AACCTAATCAAAAAA CGGCATC TTCT GATGCCG TTTTTATTTTCTTCA TERM 3760 3219923 - 3219906 - T 100 -11.3 -5.29385 | opp_overlap 3219906 3219900 AACCTAATCAAAAAA CGGCATC TTCT GATGCCG TTTTTATTTTCTTCA TERM 3761 3219989 - 3219969 - T 84 -6.8 -4.91459 | opp_overlap 3219969 3219971, overlap 3219959 3219971 GAATAGGCATAAAAA TGCCCAGC TATTT GCTGGGTA TTTTATTATCCTTCA TERM 3762 3219969 - 3219989 + T 90 -9 -4.84492 | opp_overlap 3219959 3219969 3219971, overlap 3219971 GAATAGGCATAAAAA TGCCCAGC TATTT GCTGGGTA TTTTATTATCCTTCA TERM 3763 3219987 - 3219971 - T 70 -9.4 -2.7119 | opp_overlap 3219971 3219969, overlap 3219959 3219969 ATAGGCATAAAAATG CCCAGC TATTT GCTGGG TATTTTATTATCCTT TERM 3764 3219971 - 3219987 + T 86 -9.4 -4.03023 | opp_overlap 3219959 3219969 3219971, overlap 3219969 ATAGGCATAAAAATG CCCAGC TATTT GCTGGG TATTTTATTATCCTT TERM 3765 3220032 - 3220020 - T 71 -6.3 -4.18197 | opp_overlap 3220020 3220019 ACGGGTTATTTAAAA CATTC TAG GAATG CTTCGTCAGCTTGAT Shew185_2689 3221016 - 3220024 - | formate/nitrite transporter TERM 3766 3220098 - 3220110 + g 73 -7.7 -4.06678 | opp_overlap 3220097 GGGGCGCTGAAAAGT GCTCA TGG TGAGC TTTGTGTGGATCGCT TERM 3767 3221958 - 3221943 - H 79 -3.3 -5.40474 | ATTGTGGTAAAAAAA TGCTA CCTAGC TAGCA AATTTGGGATTAAGC TERM 3768 3223011 - 3222990 - g 74 -4.3 -4.84642 | opp_overlap 3222990, overlap 3222992 GTCAAATGAAGAAAA TGGCTGCCA AATA TGGCTGCGA TATTTCTCGCCCAGC Shew185_2690 3222281 - 3224563 + | formate acetyltransferase TERM 3769 3224609 - 3224570 - f 70 -8 -3.75153 | gap 1, opp_overlap 3224573 3224578, overlap 3224578 GGTCTGTAAGCTAAA TTAGTCAAGGCTGTAGTAC ACT GTGCTACAGCCTC-ACTTA TTTTAACAGGAGTCA TERM 3770 3224573 - 3224606 + F 89 -9.7 -4.17048 | gap 1, opp_overlap 3224570 3224578, overlap 3224578 CTGTAAGCTAAATTA GTCAAGGCTGTAGTAC ACT GTGCTACAGCCTC-AC TTATTTTAACAGGAG TERM 3771 3224578 - 3224602 + F 95 -15.1 -2.75865 | opp_overlap 3224570 3224578, overlap 3224573 AGCTAAATTAGTCAA GGCTGTAGTAC ACT GTGCTACAGCC TCACTTATTTTAACA TERM 3772 3224602 - 3224578 - f 91 -12.9 -3.16608 | opp_overlap 3224578 3224573, overlap 3224570 AGCTAAATTAGTCAA GGCTGTAGTAC ACT GTGCTACAGCC TCACTTATTTTAACA TERM 3773 3225228 - 3225214 - g 72 -5.7 -4.37991 | overlap 3225208 GAAAAACATTGAAAA GGTAG AATTA CTACC CTATCACGAATTAGG Shew185_2691 3224627 - 3225367 + | pyruvate formate lyase-activating enzyme 1 Shew185_2692 3225894 - 3225412 - | hypothetical protein TERM 3774 3225736 - 3225709 - G 100 -9.2 -5.29782 | gap 1 CATACTCACAAAAAA CGCCAACACTGGC ATC ACCAGTAT-GGCG AGCTGAGTAGCTCGG TERM 3775 3226536 - 3226547 + G 72 -5.8 -4.3255 | TCGTTATGGCATGCA TGGC ACGA GCCA TTTATTCGTTAGCCG Shew185_2693 3225997 - 3227196 + | acetate kinase TERM 3776 3227230 - 3227209 - f 75 -10.2 -3.22832 | opp_overlap 3227209, overlap 3227204 3227202 TAAAAAATGACCTAA GCCGTTTG CTCACC CAAACGGC TTTACGCTTTACATA TERM 3777 3227209 - 3227230 + F 80 -10.2 -3.72363 | opp_overlap 3227204 3227202 3227209 TAAAAAATGACCTAA GCCGTTTG CTCACC CAAACGGC TTTACGCTTTACATA TERM 3778 3227822 - 3227795 - g 71 -2.7 -5.00616 | gap 1, opp_overlap 3227801, overlap 3227802 TTGGGGCGGAAAAAA GAACA-AACGCC TGATT GGCGCTGTGATC AACAAGATTGGTGCC TERM 3779 3227814 - 3227802 - g 81 -6.2 -4.84182 | opp_overlap 3227801, overlap 3227795 GGAAAAAAGAACAAA CGCC TGATT GGCG CTGTGATCAACAAGA TERM 3780 3227970 - 3227944 - g 73 -7.2 -4.20106 | AAATGCCAGGTAAAA GCCCACTGCGTA TTT TAGGCAGCGTGC CATACAACCTTGATC TERM 3781 3229241 - 3229257 + G 78 -7.9 -4.4261 | ACCTGATAGTCCTGT CGCTGGC CAA GCCACCG TTTTCGTGTTCCCAG Shew185_2694 3227310 - 3229463 + | phosphate acetyltransferase TERM 3782 3229498 - 3229517 + F 100 -10 -5.67063 | opp_overlap 3229498 CGTTACGCGCAAAAA GCACTGGT ACTT ACCGGTGC TTTTTTTATGCTCAA TERM 3783 3229517 - 3229498 - f 82 -7.8 -4.59773 | opp_overlap 3229498 CGTTACGCGCAAAAA GCACTGGT ACTT ACCGGTGC TTTTTTTATGCTCAA TERM 3784 3229777 - 3229803 + F 86 -8 -4.99035 | opp_overlap 3229778, overlap 3229778 TGAAGTCTTCAACAT AGTTTTCCACAG TTT CTGTGGATAACC TTTTTATATGCCTCC TERM 3785 3229778 - 3229802 + F 88 -11.5 -3.58698 | opp_overlap 3229778, overlap 3229777 GAAGTCTTCAACATA GTTTTCCACAG TTT CTGTGGATAAC CTTTTTATATGCCTC TERM 3786 3229802 - 3229778 - f 81 -11.5 -3.0782 | opp_overlap 3229778 3229777 GAAGTCTTCAACATA GTTTTCCACAG TTT CTGTGGATAAC CTTTTTATATGCCTC Shew185_2695 3229944 - 3230378 + | hypothetical protein TERM 3787 3230413 - 3230442 + F 85 -11.5 -3.35371 | gap 1, opp_overlap 3230418, overlap 3230415 3230418 CTTTTATTGTCATCC CAA-AACCACCGCC TCT GGCGGTGGTGATTG TTCCTTGAGGCTATA TERM 3788 3230415 - 3230439 + F 83 -9.9 -3.81414 | opp_overlap 3230418, overlap 3230413 3230418 TTTATTGTCATCCCA AAACCACCGCC TCT GGCGGTGGTGA TTGTTCCTTGAGGCT TERM 3789 3230436 - 3230418 - f 100 -16 -4.13945 | opp_overlap 3230418 3230415 3230413 ATTGTCATCCCAAAA CCACCGCC TCT GGCGGTGG TGATTGTTCCTTGAG TERM 3790 3230418 - 3230436 + F 100 -16 -2.98947 | opp_overlap 3230418, overlap 3230415 3230413 ATTGTCATCCCAAAA CCACCGCC TCT GGCGGTGG TGATTGTTCCTTGAG Shew185_2696 3230666 - 3231694 + | transposase IS116/IS110/IS902 family protein Shew185_2697 3233095 - 3231918 - | transposase IS3/IS911 family protein TERM 3791 3232131 - 3232117 - G 76 -7 -4.4448 | opp_overlap 3232117 AAACTTCTAAAGAAA CGCTCC ATT GGTGCG TTATCCCAACAATTC TERM 3792 3233579 - 3233565 - R 81 -11.4 -3.02144 | GTAGTTTTTGGAATA GCCCCT TCC AGGGGC AAGTCAAAGCCGCCT TERM 3793 3233588 - 3233608 + r 90 -11.1 -4.20768 | opp_overlap 3233588 3233589, overlap 3233589 CAGGGGCAAGTCAAA GCCGCCTTC TAA GAAGGCGGA TTCTTTATTGCGCAT TERM 3794 3233608 - 3233588 - R 83 -11.1 -3.75629 | opp_overlap 3233588 3233589, overlap 3233589 CAGGGGCAAGTCAAA GCCGCCTTC TAA GAAGGCGGA TTCTTTATTGCGCAT TERM 3795 3233589 - 3233607 + r 100 -14.6 -3.11738 | opp_overlap 3233589 3233588, overlap 3233588 AGGGGCAAGTCAAAG CCGCCTTC TAA GAAGGCGG ATTCTTTATTGCGCA TERM 3796 3233607 - 3233589 - R 95 -14.6 -2.85056 | opp_overlap 3233588 3233589, overlap 3233588 AGGGGCAAGTCAAAG CCGCCTTC TAA GAAGGCGG ATTCTTTATTGCGCA TERM 3797 3233669 - 3233688 + r 83 -10.8 -3.7456 | opp_overlap 3233669 TTTCAGCTAAAAAAA TAGCAACC CTAA GGTTGCTA TTTCAATGTGCTTGT TERM 3798 3233688 - 3233669 - R 100 -10.8 -5.47218 | opp_overlap 3233669 TTTCAGCTAAAAAAA TAGCAACC CTAA GGTTGCTA TTTCAATGTGCTTGT Shew185_2699 3233848 - 3233750 - | hypothetical protein Shew185_2700 3234220 - 3234444 + | hypothetical protein TERM 3799 3234672 - 3234689 + T 81 -11.3 -3.06492 | opp_overlap 3234672 AAAACCGACAAAAAA GGCCAGT TAAA ACTGGCC TGTTAAGCTAAATCA TERM 3800 3234689 - 3234672 - T 100 -11.3 -5.35222 | opp_overlap 3234672 AAAACCGACAAAAAA GGCCAGT TAAA ACTGGCC TGTTAAGCTAAATCA Shew185_2701 3235625 - 3234708 - | hypothetical protein TERM 3801 3235067 - 3235054 - G 73 -2.3 -5.02074 | overlap 3235055 TCATGGCCTAAAAAA CGTGC TCCC GCACT AAAGCCATTCAGCAA Shew185_2702 3236741 - 3235632 - | hypothetical protein Shew185_2703 3236840 - 3237202 + | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase Shew185_2704 3237289 - 3238182 + | hypothetical protein TERM 3802 3238191 - 3238167 - f 72 -10 -2.53213 | overlap 3238183 CAATGCCTTAACCGA CGTGTTAGCC AAATA GGCTAGCACG CTGATGCTAACAATC TERM 3803 3238237 - 3238258 + F 80 -10.1 -3.68351 | opp_overlap 3238237 3238227 TAAAACATCGACATA TTCGGGCGC TAAT GCGCACGAA TTTCGGTGCTAAGGC TERM 3804 3238258 - 3238237 - f 75 -10.1 -2.97709 | opp_overlap 3238237, overlap 3238227 TAAAACATCGACATA TTCGGGCGC TAAT GCGCACGAA TTTCGGTGCTAAGGC TERM 3805 3239054 - 3239044 - g 77 -8.2 -4.18494 | opp_overlap 3239044 3239041 TATTGTTATCCAAAA CGCC GTC GGCG TCAGTTTAGCCAATC Shew185_2705 3238712 - 3239935 + | sodium/glutamate symporter TERM 3806 3240027 - 3240008 - T 100 -12.1 -4.69656 | opp_overlap 3240008 AATCAGCTAACAAAA GGGCGCC TCATTC GGCGCCC TTCTTTATGGAGCAA TERM 3807 3240008 - 3240027 + T 91 -12.1 -4.06419 | opp_overlap 3240008 AATCAGCTAACAAAA GGGCGCC TCATTC GGCGCCC TTCTTTATGGAGCAA Shew185_2706 3240732 - 3240070 - | signal peptidase I TERM 3808 3240506 - 3240522 + g 74 -9.3 -3.64822 | opp_overlap 3240492 3240490 3240500 ACCACGATATCACCG CGGGCGG GAT CCGCCAG TTTGACTAAGGCGAT TERM 3809 3240914 - 3240939 + r 75 -2.6 -5.29445 | gap 1, opp_overlap 3240914, overlap 3240917 CCAGACAATAAAAAA GCACTGA-GCT TAGGC AGCATCAGTAC TTTTTATTGTTAACG TERM 3810 3240939 - 3240914 - R 90 -4.8 -5.60689 | gap 1, opp_overlap 3240914 3240917 CCAGACAATAAAAAA GCACTGA-GCT TAGGC AGCATCAGTAC TTTTTATTGTTAACG Shew185_2707 3243514 - 3241004 - | hypothetical protein TERM 3811 3241577 - 3241566 - G 81 -5.8 -4.96848 | TCGTTCAGATAAAAA CTCG CCAT CGAG GTATAAGCAAAGGGC Shew185_2708 3244245 - 3243505 - | ABC transporter related TERM 3812 3243534 - 3243557 + gH 79 -10.9 -3.16338 | overlap 3243533 3243531 AAGCCTCCTTAGCAT CGGCGAGCG GTGCTG CGCGCGCCG TATCTTCCTGTAAAT TERM 3813 3243843 - 3243861 + gH 74 -4.4 -4.87893 | opp_overlap 3243840, overlap 3243840 GGGATAAACCGACCC GCACCAGC ATG GCTTGGGC TTTTTCCTTAGCATT Shew185_2709 3244232 - 3244882 + | arylesterase Shew185_2710 3245028 - 3246095 + | hypothetical protein TERM 3814 3246149 - 3246123 - T 77 -6.5 -4.58395 | opp_overlap 3246128, overlap 3246128 TCGATTCGCTAAAAA CCAAAGGGCGC ATTAA GCGCCCTTTCC TTTCTGAATGTATTC TERM 3815 3246128 - 3246144 + T 90 -10.8 -4.15066 | opp_overlap 3246128 3246123 TCGCTAAAAACCAAA GGGCGC ATTAA GCGCCC TTTCCTTTCTGAATG TERM 3816 3246144 - 3246128 - T 91 -10.8 -4.32046 | opp_overlap 3246128, overlap 3246123 TCGCTAAAAACCAAA GGGCGC ATTAA GCGCCC TTTCCTTTCTGAATG Shew185_2711 3246916 - 3246191 - | virulence factor family protein Shew185_2712 3249476 - 3246924 - | hypothetical protein TERM 3817 3250081 - 3250055 - R 100 -11 -5.74086 | opp_overlap 3250055 AAACCAAACAAAAAA GTGTGAATACTC AAA AAGTATCCACAC TAGATTCCGTTACAT Shew185_2713 3251107 - 3250091 - | putative periplasmic protease TERM 3818 3251066 - 3251024 - G 70 -10 -3.19018 | opp_overlap 3251038, overlap 3251038 AACAGTGGAAGCCAA CACCACAATAATAACCGCAA CGA TTGCGACCACTATCGTGACG GCTTTCGCCAAAAAC TERM 3819 3251198 - 3251183 - R 100 -10.4 -5.61596 | opp_overlap 3251183 AGGCCCATAAAAAAA CCCAGC ATTC GCTGGG TTTTTCCGATTAAGC TERM 3820 3251183 - 3251198 + r 93 -10.4 -4.66833 | opp_overlap 3251183 AGGCCCATAAAAAAA CCCAGC ATTC GCTGGG TTTTTCCGATTAAGC Shew185_2714 3253702 - 3251219 - | hypothetical protein TERM 3821 3252681 - 3252694 + g 73 -5.3 -4.51174 | opp_overlap 3252681 TGTGCTTTCCAATGA CCATT AATT AATGG TTTTCCTTCTGCTGA Shew185_2715 3253965 - 3254702 + | short chain dehydrogenase TERM 3822 3254740 - 3254770 + T 100 -12.8 -4.28254 | opp_overlap 3254740 3254743 3254747, overlap 3254747 AGTATGATTCAGCAA TAATAAAGGGCC TATTGAT GGCCCTTTATTA TTTTAGATATTCGCA TERM 3823 3254770 - 3254740 - T 85 -12.8 -3.19642 | opp_overlap 3254740 3254747, overlap 3254743 3254747 AGTATGATTCAGCAA TAATAAAGGGCC TATTGAT GGCCCTTTATTA TTTTAGATATTCGCA TERM 3824 3254767 - 3254743 - T 80 -10.1 -3.73914 | opp_overlap 3254740 3254747, overlap 3254740 3254747 ATGATTCAGCAATAA TAAAGGGCC TATTGAT GGCCCTTTA TTATTTTAGATATTC TERM 3825 3254763 - 3254747 - T 77 -6.5 -4.48713 | opp_overlap 3254740 3254747, overlap 3254743 3254740 TTCAGCAATAATAAA GGGCC TATTGAT GGCCC TTTATTATTTTAGAT TERM 3826 3254747 - 3254763 + T 80 -6.5 -4.68601 | opp_overlap 3254747 3254743 3254740, overlap 3254740 TTCAGCAATAATAAA GGGCC TATTGAT GGCCC TTTATTATTTTAGAT Shew185_2716 3255811 - 3254846 - | hypothetical protein TERM 3827 3255896 - 3255869 - R 100 -13.6 -4.40333 | gap 1, opp_overlap 3255876, overlap 3255870 3255876 TGCAAATAACAGAAA GCAAAAAGGCCGC TAA GCGGCCTTTTT-C ATTGGGATAAAACAA TERM 3828 3255896 - 3255870 - R 93 -13.8 -3.23115 | opp_overlap 3255876, overlap 3255869 3255876 GCAAATAACAGAAAG CAAAAAGGCCGC TAA GCGGCCTTTTTC ATTGGGATAAAACAA TERM 3829 3255876 - 3255890 + r 100 -12.8 -4.87291 | opp_overlap 3255876 3255869 3255870 AACAGAAAGCAAAAA GGCCGC TAA GCGGCC TTTTTCATTGGGATA TERM 3830 3255890 - 3255876 - R 100 -12.8 -5.08367 | opp_overlap 3255876, overlap 3255869 3255870 AACAGAAAGCAAAAA GGCCGC TAA GCGGCC TTTTTCATTGGGATA Shew185_2717 3256788 - 3255913 - | pseudouridine synthase Shew185_2718 3257377 - 3256781 - | putative transcriptional regulator TERM 3831 3257224 - 3257245 + g 77 -3 -5.24647 | TGTCTTGATAATCCT GCTGCA GCTCATCCAA TGCAGC TTTTATTTTGTCTCT Shew185_2719 3258169 - 3257381 - | chromosome segregation and condensation protein ScpA Shew185_2720 3258949 - 3258329 - | Sua5/YciO/YrdC/YwlC family protein Shew185_2721 3259854 - 3258946 - | phosphotransferase domain-containing protein TERM 3832 3260099 - 3260116 + H 100 -12.7 -5.4833 | opp_overlap 3260099 CAGAATCAACAAGAA GCCCGCA GAAA TGCGGGC TTTTTTGTTAGGTGC TERM 3833 3260116 - 3260099 - H 93 -12.7 -4.05027 | opp_overlap 3260099 CAGAATCAACAAGAA GCCCGCA GAAA TGCGGGC TTTTTTGTTAGGTGC TERM 3834 3260395 - 3260377 - g 78 -6 -4.70266 | AAGATCACTTAAAAA GCATGG TGATGAC CCATGC TGCCATGATGATCCG Shew185_2722 3260223 - 3261926 + | anthranilate synthase component I TERM 3835 3262229 - 3262240 + G 76 -7.2 -4.46212 | opp_overlap 3262217 TTACGGCGGCACAGT GGCG CGCG CGCC TTTTGTGGTCCACGG Shew185_2723 3261936 - 3262538 + | anthranilate synthase component II TERM 3836 3262635 - 3262594 - g 71 -8.7 -3.76815 | gap 1, opp_overlap 3262605 3262605 AGGTAAAAGTTTAAA CCGCGAGCAAAC-CGCCGAA CTT TTTGGCGCGTTAATTCGCGG TGAGATGAGTGAAGC TERM 3837 3262740 - 3262710 - g 72 -11 -2.66964 | opp_overlap 3262705, overlap 3262707 CCATTGATGAGATCA GCGGCGCCGCCGAT GCC ATGCGCGCCGCCGC CAAACCTTTTCCTTG Shew185_2724 3262535 - 3263608 + | anthranilate phosphoribosyltransferase Shew185_2725 3263613 - 3265100 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 3838 3265866 - 3265849 - g 75 -5.5 -4.7497 | GGCAGCTACGAAAAA GCCCACT ATTT ACTGGGC ACAGCCGCGGGACCA Shew185_2726 3265297 - 3266487 + | tryptophan synthase subunit beta Shew185_2727 3266493 - 3267314 + | tryptophan synthase subunit alpha TERM 3839 3267425 - 3267391 - f 100 -18.1 -3.48063 | opp_overlap 3267400, overlap 3267384 GATTTAAATTGATAA CCTTAAGCACTAGCC TAAAT AGCTAGTGCTTAAGG CGCAAAGAGATAGAA TERM 3840 3267491 - 3267444 - f 100 -12.5 -5.1104 | gap 2, opp_overlap 3267447 3267448 3267453, overlap 3267448 3267453 AAAGAGATAGAAAAA TAAA-CAAAATAAGTGAGGC-AC ATTC GCAGCCTCACTTATTTTGCTTTA GATTGACCGATTCCT TERM 3841 3267447 - 3267487 + F 88 -11.4 -3.75332 | opp_overlap 3267444 3267448 3267453, overlap 3267448 3267453 GAGATAGAAAAATAA ACAAAATAAGTGAGGC ACATTCGCA GCCTCACTTATTTTGC TTTAGATTGACCGAT TERM 3842 3267448 - 3267486 + F 95 -14.9 -2.84878 | opp_overlap 3267444 3267448 3267453, overlap 3267447 3267453 AGATAGAAAAATAAA CAAAATAAGTGAGGC ACATTCGCA GCCTCACTTATTTTG CTTTAGATTGACCGA TERM 3843 3267486 - 3267448 - f 100 -14.9 -5.02777 | gap 1, opp_overlap 3267448 3267447 3267453, overlap 3267444 3267453 AGATAGAAAAATAAA CAAAATAAGTGAGGC-AC ATTC GCAGCCTCACTTATTTTG CTTTAGATTGACCGA TERM 3844 3267453 - 3267481 + F 88 -9 -4.5852 | opp_overlap 3267448 3267444 3267453, overlap 3267448 3267447 GAAAAATAAACAAAA TAAGTGAGGC ACATTCGCA GCCTCACTTA TTTTGCTTTAGATTG TERM 3845 3267481 - 3267453 - f 93 -9 -5.3167 | gap 1, opp_overlap 3267453 3267448 3267447, overlap 3267448 3267444 GAAAAATAAACAAAA TAAGTGAGGC-AC ATTC GCAGCCTCACTTA TTTTGCTTTAGATTG Shew185_2728 3267698 - 3268108 + | hypothetical protein Shew185_2729 3268345 - 3268629 + | hypothetical protein TERM 3846 3268699 - 3268684 - f 80 -10.4 -3.64103 | opp_overlap 3268684 CAGCCACATTTCAAA GCCGTC TTAG GACGGC TTTAGCTTAAGTTCA TERM 3847 3268684 - 3268699 + F 80 -10.4 -3.78409 | opp_overlap 3268684 CAGCCACATTTCAAA GCCGTC TTAG GACGGC TTTAGCTTAAGTTCA TERM 3848 3269635 - 3269622 - g 73 -4.5 -4.70659 | TTTTAGATGCAAAAA CCAGC TTTG ACTGG CATCCAGGCATGCTA Shew185_2730 3269486 - 3270991 + | L-lysine 6-monooxygenase (NADPH) Shew185_2731 3270991 - 3271641 + | hypothetical protein TERM 3849 3272370 - 3272346 - g 91 -11.5 -4.07568 | TGCCGCCCTCGAAAA CTTGAGTCACG ACG CGTTACTCAAG GAGGAGCTTGGCCAG TERM 3850 3272504 - 3272483 - g 88 -7.2 -5.00884 | opp_overlap 3272502 AGTGGCGTGAAAAAA TCGCCCGC GTCTTT GCCGGCGA CATCGCCCGTGGCGA TERM 3851 3273491 - 3273477 - g 73 -3.4 -4.89852 | CGACAGGGAGAAAAA CCTACG CTT CGCTGG CGGTATCGACAATCC Shew185_2732 3271651 - 3273579 + | IucA/IucC family protein TERM 3852 3273634 - 3273654 + F 90 -10.4 -4.41348 | TGACGAAACGTTTGT GTGGGCCA CTTAT TGGCCCGC TTTATTTAACCCCAA TERM 3853 3273869 - 3273849 - g 71 -2.6 -4.83593 | opp_overlap 3273853 AAGAAGCACCAAAAA GAGATTGA AATCA TCAATGTC ATTGGCGCTAAGGAT Shew185_2733 3273675 - 3275918 + | TonB-dependent siderophore receptor TERM 3854 3275980 - 3275948 - f 100 -13.5 -4.13728 | opp_overlap 3275946 3275942, overlap 3275949 GAGATAGTTCGAAAA CCCTTGTGAGCCTAA ATC TTGGGCTCACAAGGT CCTCATCTATTGGAC TERM 3855 3275979 - 3275949 - f 100 -17 -3.07755 | opp_overlap 3275946 3275942, overlap 3275948 AGATAGTTCGAAAAC CCTTGTGAGCCTAA ATC TTGGGCTCACAAGG TCCTCATCTATTGGA Shew185_2734 3276060 - 3277196 + | ferric iron reductase Shew185_2735 3277251 - 3277862 + | intracellular septation protein A Shew185_2736 3277862 - 3278161 + | YciI-like protein TERM 3856 3278406 - 3278395 - g 71 -4.4 -4.66264 | overlap 3278385 GAAAAGCTGCAAAAA GGTT TTCC AACC GATGACGAAGATGCC Shew185_2737 3278161 - 3278973 + | exonuclease III TERM 3857 3279031 - 3279004 - T 81 -11.4 -2.94747 | opp_overlap 3279009, overlap 3279009 CCATCTTAGTAGATA TAAAACATCGGC TTAG GCCGATGTTTTT GTTTGAGAGTGACTT TERM 3858 3279026 - 3279009 - T 93 -11.3 -4.62984 | opp_overlap 3279009, overlap 3279004 TTAGTAGATATAAAA CATCGGC TTAG GCCGATG TTTTTGTTTGAGAGT TERM 3859 3279009 - 3279026 + T 100 -11.3 -5.27938 | opp_overlap 3279009 3279004 TTAGTAGATATAAAA CATCGGC TTAG GCCGATG TTTTTGTTTGAGAGT Shew185_2738 3280101 - 3279316 - | hypothetical protein Shew185_2739 3280274 - 3280465 + | hypothetical protein TERM 3860 3280539 - 3280525 - f 71 -6.4 -4.20769 | overlap 3280529 ACATGTGAAGATAAA CCGACT AAA AGTCAG ACTCTAAGTGCAACT TERM 3861 3281386 - 3281396 + G 73 -4.6 -4.82901 | GAATGAAGGCTTAGT TGGC ATT GCCG TTTTTATGGGGGGAG Shew185_2740 3281156 - 3281854 + | CRP/FNR family transcriptional regulator TERM 3862 3282135 - 3282116 - f 71 -6.5 -4.15748 | GTACTGTAAAAAATA GCACTAT AAACAA ATAGTGC AGTAAACCCATAACC Shew185_2741 3282696 - 3283262 + | hypothetical protein TERM 3863 3283339 - 3283309 - T 81 -11.2 -3.09327 | overlap 3283312 TTATCGTATCTAATA TGACCCTGCCAATA GTC TATTGGCAGGGTTG GCAAATCGCATTCTT TERM 3864 3283336 - 3283312 - T 100 -17.3 -2.75992 | overlap 3283309 TCGTATCTAATATGA CCCTGCCAATA GTC TATTGGCAGGG TTGGCAAATCGCATT Shew185_2742 3283805 - 3283518 - | hypothetical protein Shew185_2743 3284704 - 3284045 - | DSBA oxidoreductase TERM 3865 3285134 - 3285115 - R 79 -8.6 -3.96618 | TCGAAGGGGAAACAA TGCGCAAT GAAT ACTGCGCA ACTGGCAATATATCG TERM 3866 3285203 - 3285179 - R 100 -17.3 -4.04576 | opp_overlap 3285179 ATTTAGAGAATGAAA TGGCGGAAATC TAC GATTTCCGCCA TTTTCGGATGATACG TERM 3867 3285179 - 3285203 + r 100 -17.3 -4.15565 | opp_overlap 3285179 ATTTAGAGAATGAAA TGGCGGAAATC TAC GATTTCCGCCA TTTTCGGATGATACG Shew185_2744 3286752 - 3285298 - | methyl-accepting chemotaxis sensory transducer Shew185_2745 3287348 - 3286857 - | hypothetical protein TERM 3868 3287291 - 3287277 - G 70 -7.8 -3.8647 | overlap 3287267 AGTGACCAGATGAAA GGCATC TGC GACGCC ACACCAAATAGCCGC TERM 3869 3287524 - 3287495 - R 93 -7.3 -5.40072 | gap 1, opp_overlap 3287503, overlap 3287496 3287503 TTTGTGGTAAAAAAA CGAAAAAAGCGCTT ATT AGGCGCTTTTTT-G TTCAAATGGCGTTCA TERM 3870 3287524 - 3287496 - R 71 -7.5 -3.83561 | opp_overlap 3287503, overlap 3287495 3287503 TTGTGGTAAAAAAAC GAAAAAAGCGCTT ATT AGGCGCTTTTTTG TTCAAATGGCGTTCA TERM 3871 3287517 - 3287503 - R 93 -5.6 -5.62552 | opp_overlap 3287503, overlap 3287495 3287496 AAAAAAACGAAAAAA GCGCTT ATT AGGCGC TTTTTTGTTCAAATG TERM 3872 3287503 - 3287517 + r 93 -7.8 -5.46657 | opp_overlap 3287495 3287496 3287503 AAAAAAACGAAAAAA GCGCTT ATT AGGCGC TTTTTTGTTCAAATG Shew185_2746 3289806 - 3287560 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Shew185_2747 3290326 - 3289808 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Shew185_2748 3291067 - 3290330 - | hypothetical protein Shew185_2749 3292083 - 3291067 - | hypothetical protein Shew185_2750 3294211 - 3292472 - | methyl-accepting chemotaxis sensory transducer TERM 3873 3294339 - 3294299 - R 90 -11.3 -3.91488 | opp_overlap 3294300 3294300, overlap 3294300 AATTCGTGGAAATAA TCGTTTGATTTGCGAGTGA TTA TCGCTCACAAATCAAACAG TTCTTAATAACGTGA TERM 3874 3294300 - 3294338 + r 83 -12.6 -2.83371 | opp_overlap 3294299 3294300, overlap 3294300 ATTCGTGGAAATAAT CGTTTGATTTGCGAGTGA TTA TCGCTCACAAATCAAACA GTTCTTAATAACGTG TERM 3875 3294300 - 3294339 + r 90 -12.4 -3.7282 | gap 1, opp_overlap 3294299 3294300, overlap 3294300 ATTCGTGGAAATAAT C-GTTTGATTTGCGAGTGA TTA TCGCTCACAAATCAAACAG TTCTTAATAACGTGA TERM 3876 3294338 - 3294300 - R 100 -14.8 -2.94411 | opp_overlap 3294300 3294300, overlap 3294299 ATTCGTGGAAATAAT CGTTTGATTTGCGAGTGA TTA TCGCTCACAAATCAAACA GTTCTTAATAACGTG Shew185_2751 3295002 - 3294358 - | beta-lactamase domain-containing protein Shew185_2752 3295258 - 3296547 + | alpha/beta hydrolase fold TERM 3877 3296647 - 3296669 + T 100 -11.4 -5.75342 | GACCTATTTCCGTAT GAGTAAACCG TTT TGGTTTACTC TTTTTTTTGCCAAAA TERM 3878 3296732 - 3296685 - T 86 -10 -4.07568 | opp_overlap 3296678 TTTTTTTTGCCAAAA TTTAGGCCTATTTCCTGCCATT GTTT AATGGCCGGAAATGCCCCTAAA ACCAATGAGACTCGT Shew185_2753 3298870 - 3296753 - | DNA topoisomerase III TERM 3879 3297725 - 3297736 + g 89 -5.8 -5.31275 | TGGAACAATGGCGTG GTGG GCAT CCAC TTTTTTATCATCCCA TERM 3880 3298836 - 3298846 + g 78 -5.4 -4.8667 | TCGGCAATGGCCCGC CCTA GGC TAGG TTTTTCTGCGATATA Shew185_2754 3299037 - 3299324 + | hypothetical protein TERM 3881 3299487 - 3299467 - T 100 -8.3 -5.68039 | opp_overlap 3299467 AAAGCCATAAAAAAA GCCAATGAC ATT ATCACTGGC TTTTTATCCGCCTAA TERM 3882 3299467 - 3299487 + T 79 -5.4 -4.84359 | opp_overlap 3299467 AAAGCCATAAAAAAA GCCAATGA CATTA TCACTGGC TTTTTATCCGCCTAA Shew185_2755 3301026 - 3299512 - | amidophosphoribosyltransferase TERM 3883 3299743 - 3299733 - G 71 -6.8 -4.17316 | AGTCTTGGAAAATAA TGCC ATC GGCA CCAATTAACTTAGCG Shew185_2756 3301784 - 3301296 - | colicin V production protein Shew185_2757 3302652 - 3301900 - | sporulation domain-containing protein Shew185_2758 3303916 - 3302645 - | FolC bifunctional protein TERM 3884 3303014 - 3302988 - G 73 -2.2 -5.14563 | overlap 3302989 TGCTGCACCAAAAAA CGCGCCGCAT GGGGATT ATGCGCCACA TCGAGTAGCACTAAC Shew185_2759 3304746 - 3303961 - | tRNA pseudouridine synthase A TERM 3885 3304806 - 3304822 + r 82 -11.5 -3.17901 | opp_overlap 3304806 AGCCCATAAAAAAAA CGGCGCT GAA GGCGCCG TTAGGTTGAAACTCT TERM 3886 3304822 - 3304806 - R 100 -10.8 -5.94713 | opp_overlap 3304806 AGCCCATAAAAAAAA CGGCGC TGAAG GCGCCG TTAGGTTGAAACTCT Shew185_2760 3308280 - 3304849 - | hypothetical protein TERM 3887 3308426 - 3308410 - R 100 -12.3 -6.09196 | opp_overlap 3308410 TGTAAAACAAAAAAA GCCTGCT GAC AGCAGGC TTTTTCAATGGGCAT TERM 3888 3308410 - 3308426 + r 100 -12.3 -4.66163 | opp_overlap 3308410 TGTAAAACAAAAAAA GCCTGCT GAC AGCAGGC TTTTTCAATGGGCAT Shew185_2761 3309475 - 3308459 - | aspartate-semialdehyde dehydrogenase TERM 3889 3308800 - 3308832 + g 77 -6.3 -4.61162 | opp_overlap 3308806, overlap 3308801 3308806 AAATCTCATCGTCAC CGAAAATCTTCTGGG TTT CCCAGACCATTTTCA TTTCTTCTTTGGTAT TERM 3890 3308801 - 3308831 + g 73 -9.8 -3.35071 | opp_overlap 3308806, overlap 3308800 3308806 AATCTCATCGTCACC GAAAATCTTCTGGG TTT CCCAGACCATTTTC ATTTCTTCTTTGGTA TERM 3891 3308806 - 3308826 + g 71 -3.9 -4.71708 | opp_overlap 3308806, overlap 3308801 3308800 CATCGTCACCGAAAA TCTTCTGGG TTT CCCAGACCA TTTTCATTTCTTCTT Shew185_2762 3310608 - 3309478 - | D-isomer specific 2-hydroxyacid dehydrogenase catalytic region TERM 3892 3310727 - 3310744 + r 81 -11.3 -3.08966 | opp_overlap 3310727 AACGTCCATAAAAAA GGGAAGC CTAA GCTTCCC TTCAATCGCGTTTGA TERM 3893 3310744 - 3310727 - R 100 -11.3 -5.25803 | opp_overlap 3310727 AACGTCCATAAAAAA GGGAAGC CTAA GCTTCCC TTCAATCGCGTTTGA Shew185_2763 3312004 - 3310769 - | Beta-ketoacyl synthase TERM 3894 3311905 - 3311917 + g 70 -7.7 -3.92467 | TGCGGCCCGCTTTCA GTGAC TCG GTCAC TTCTTGCTTGTTATT Shew185_2764 3312119 - 3314176 + | FAD dependent oxidoreductase TERM 3895 3314232 - 3314265 + T 70 -9.6 -2.52896 | opp_overlap 3314224 3314232 CTGTAAACCACTTAA GCGGCTGTGATGAC TATTGC GTTATCACTGCTGC TAGGTTCAAGGCTGC Shew185_2765 3314953 - 3314228 - | tRNA/rRNA methyltransferase (SpoU) Shew185_2766 3315248 - 3314964 - | YfcL protein Shew185_2767 3316431 - 3315253 - | ATP-NAD/AcoX kinase TERM 3896 3315859 - 3315837 - G 95 -12 -4.25104 | opp_overlap 3315817 3315833 CGGCGGGCACTAAAA GCTCGCCAAA TCG TTTGGCGCGC ACTGTGCCTTGGCGA Shew185_2768 3317706 - 3316531 - | major facilitator transporter TERM 3897 3316597 - 3316579 - G 73 -7.4 -4.24413 | overlap 3316581 3316592 CCTAGGAATAAAGAA TACCGCCA GCA TAGCGGCA AAGGCGCATCCGGCT Shew185_2769 3318879 - 3317785 - | chorismate synthase TERM 3898 3318977 - 3318943 - R 100 -18 -2.60079 | overlap 3318940 3318939 CCACTGGACAATTTA TTTTCCCGCTGCAAGC CTA ACTGGCAGCGGGAAAA GTCTCAACCTAATTT Shew185_2770 3319948 - 3319004 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 3899 3319602 - 3319578 - G 77 -8.6 -4.15508 | AACCAAGGGCTAAAA CGATTGGCGA TCATT TCGGCAATCG GTGAACGTGGCACTA Shew185_2771 3320029 - 3320559 + | hypothetical protein TERM 3900 3320648 - 3320620 - T 100 -19 -4.20531 | opp_overlap 3320620 3320624, overlap 3320624 GAGATTTACCGAAAA CAAACGGCCCAC ATTCA GTGGGCCGTTTG TTTGTAAAAGGGATA TERM 3901 3320620 - 3320648 + T 100 -19 -3.86015 | opp_overlap 3320620 3320624, overlap 3320624 GAGATTTACCGAAAA CAAACGGCCCAC ATTCA GTGGGCCGTTTG TTTGTAAAAGGGATA TERM 3902 3320644 - 3320624 - T 100 -14 -4.68908 | opp_overlap 3320624 3320620, overlap 3320620 TTTACCGAAAACAAA CGGCCCAC ATTCA GTGGGCCG TTTGTTTGTAAAAGG TERM 3903 3320624 - 3320644 + T 100 -14 -4.55295 | opp_overlap 3320620 3320624, overlap 3320620 TTTACCGAAAACAAA CGGCCCAC ATTCA GTGGGCCG TTTGTTTGTAAAAGG Shew185_2772 3321144 - 3320674 - | phosphohistidine phosphatase, SixA Shew185_2773 3321314 - 3324103 + | peptidase M16 domain-containing protein TERM 3904 3324241 - 3324215 - f 72 -10.3 -2.6155 | opp_overlap 3324221, overlap 3324214 3324221 GGGCGTAATACTAAT GTAAAACATGG CGAGT CCATGTTCTAC CCCTTCTACTGCGGA TERM 3905 3324235 - 3324221 - f 70 -5.7 -4.31688 | opp_overlap 3324221, overlap 3324215 3324214 AATACTAATGTAAAA CATGG CGAGT CCATG TTCTACCCCTTCTAC TERM 3906 3327032 - 3327043 + G 72 -5.8 -4.4017 | CATGTTTATCCTCGA CGGT GAAT ACCG TTTTGTCGAAGTTAA TERM 3907 3327184 - 3327155 - g 71 -10.1 -2.78679 | gap 1, overlap 3327154 3327157 CTTCTCCACCCAAAT CAG-GACCATGTTG AAG CAACAAGGTCGCTG GGCAAATGAAGTCGA Shew185_2774 3324387 - 3328646 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Shew185_2775 3328756 - 3329223 + | hypothetical protein TERM 3908 3329295 - 3329271 - g 89 -5.8 -5.29385 | gap 1 AATTCAATCAAAAAA GCACTCGGTTT ATCC AAACC-AGCGC GTAAAAAAGTTAAGT Shew185_2776 3329250 - 3329366 + | hypothetical protein TERM 3909 3329428 - 3329453 + T 89 -10.5 -4.19817 | opp_overlap 3329429 3329433, overlap 3329429 3329433 ATTAGGCTAGAAACA ATAAAGGGAGC ATTA GCTCCCTTTAG TTTTACATAAGTAAA TERM 3910 3329452 - 3329429 - T 100 -14 -4.07877 | opp_overlap 3329429 3329428 3329433, overlap 3329433 TTAGGCTAGAAACAA TAAAGGGAGC ATTA GCTCCCTTTA GTTTTACATAAGTAA TERM 3911 3329429 - 3329452 + T 93 -14 -3.11569 | opp_overlap 3329429 3329433, overlap 3329428 3329433 TTAGGCTAGAAACAA TAAAGGGAGC ATTA GCTCCCTTTA GTTTTACATAAGTAA TERM 3912 3329433 - 3329448 + T 89 -10.4 -4.21922 | opp_overlap 3329429 3329433, overlap 3329429 3329428 GCTAGAAACAATAAA GGGAGC ATTA GCTCCC TTTAGTTTTACATAA TERM 3913 3329448 - 3329433 - T 91 -10.4 -4.63048 | opp_overlap 3329433 3329429 3329428, overlap 3329429 GCTAGAAACAATAAA GGGAGC ATTA GCTCCC TTTAGTTTTACATAA TERM 3914 3329483 - 3329472 - T 75 -3 -5.35354 | TACATAAGTAAAAAA GTAT GAAA ATAC ATAGCATTACATATT Shew185_2777 3329705 - 3329505 - | hypothetical protein TERM 3915 3329996 - 3330027 + H 75 -10.3 -3.21726 | opp_overlap 3330003, overlap 3330003 ATGCCTTATGGCAAT AAAAAAAGCGGCA ATGATC TGCCGCTTTTTTG TTCAATCTTGTCCCG TERM 3916 3330003 - 3330020 + H 95 -8.4 -5.49234 | opp_overlap 3330003, overlap 3329996 ATGGCAATAAAAAAA GCGGCA ATGATC TGCCGC TTTTTTGTTCAATCT TERM 3917 3330020 - 3330003 - H 100 -9.1 -5.80364 | opp_overlap 3330003 3329996 ATGGCAATAAAAAAA GCGGCAA TGAT CTGCCGC TTTTTTGTTCAATCT TERM 3918 3330085 - 3330053 - H 70 -8.6 -3.34398 | overlap 3330051 3330054 TCCCGTCCTGAAATA CGTTGACATAAAGA GGACT TCTTTATGACAACA TCAAGTAACTCAAGC TERM 3919 3330084 - 3330054 - H 70 -9.9 -2.60496 | overlap 3330053 3330051 CCCGTCCTGAAATAC GTTGACATAAAGA GGACT TCTTTATGACAAC ATCAAGTAACTCAAG Shew185_2778 3330077 - 3330472 + | transposase TERM 3920 3330515 - 3330474 - f 74 -5 -4.82998 | opp_overlap 3330474 3330472 CCAAAGCAAAATAAA CCTCGCCGTTGCATGTCG CGCTGT CGGCATTTCACGGCAAGG TATTTATCAGGCTGT Shew185_2779 3330538 - 3331305 + | integrase catalytic region TERM 3921 3331302 - 3331282 - T 100 -12.6 -4.73682 | GTGCATAATAGAAAA GGCCAGCT ACTGG AGCTGGCC TAGAAACTGTCAACC Shew185_2780 3333504 - 3331384 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3922 3332089 - 3332074 - G 71 -9 -3.57144 | opp_overlap 3332073 3332070 3332084 TTGCTTACGGGCAAA TGCGAC CGTG GTCGCA ATGGTTTCTGGCGAC TERM 3923 3332190 - 3332204 + g 85 -11.4 -3.68351 | CGTTCTCTGGACGTG TCGCCG CCT CGGCGA TTTGGCTAATCGGCA Shew185_2781 3334820 - 3333510 - | 3-ketoacyl-CoA thiolase TERM 3924 3333707 - 3333722 + g 73 -2.4 -5.06414 | overlap 3333709 CGATTTCACCAATCG CGCGGT TACG GCCGAG TTTTTCTTCGGCAAA Shew185_2782 3335083 - 3336039 + | ATPase TERM 3925 3336387 - 3336416 + G 100 -14.5 -4.25056 | overlap 3336385 TCTGTTGTTGATCGA CTTGAGCCAAAGT CTCT ATTTTGGCTCAAG TTTATTGCTGCAATC Shew185_2783 3336064 - 3337017 + | hypothetical protein TERM 3926 3337427 - 3337454 + G 74 -9.8 -3.61517 | opp_overlap 3337437, overlap 3337428 AGACAGCTATTTACC CGCGCCAAAACG CCAA CGTATTGGCGCC TTGTTGGCCAAACGT TERM 3927 3337428 - 3337453 + G 85 -13.3 -2.76696 | opp_overlap 3337437, overlap 3337427 GACAGCTATTTACCC GCGCCAAAACG CCAA CGTATTGGCGC CTTGTTGGCCAAACG TERM 3928 3337452 - 3337437 - g 78 -9 -4.08216 | opp_overlap 3337428 3337427 TTACCCGCGCCAAAA CGCCAA CGTA TTGGCG CCTTGTTGGCCAAAC Shew185_2784 3337020 - 3337676 + | hypothetical protein Shew185_2785 3337670 - 3338692 + | von Willebrand factor type A TERM 3929 3338726 - 3338748 + G 91 -12 -3.80019 | CAGAATGGCTACTTG CACTAGTGCC ACT GGCTCTAGTG TTGTTGAGTTTATGG Shew185_2786 3338689 - 3340770 + | TPR repeat-containing protein Shew185_2787 3340764 - 3342458 + | hypothetical protein Shew185_2788 3342525 - 3343094 + | RNA polymerase sigma factor Shew185_2789 3343087 - 3343791 + | hypothetical protein TERM 3930 3344341 - 3344353 + G 83 -6.3 -4.85433 | GCTCGTCTCCGCAAT CACTA TTT TAGTG TTTTTCACTTTCTAT Shew185_2790 3343949 - 3345400 + | sodium/proline symporter TERM 3931 3345451 - 3345420 - f 80 -11 -3.29829 | opp_overlap 3345421 3345421 3345422 3345428, overlap 3345421 3345428 GACACGCTTGTATAA CTTAAAAAGCGCAC ACTT GTGCGCTTTTTACA TTTTGTATCCTTTTA TERM 3932 3345421 - 3345450 + F 87 -12.3 -3.38627 | opp_overlap 3345421 3345420 3345428, overlap 3345421 3345422 3345428 ACACGCTTGTATAAC TTAAAAAGCGCAC ACTT GTGCGCTTTTTAC ATTTTGTATCCTTTT TERM 3933 3345450 - 3345421 - f 83 -12.3 -2.57683 | opp_overlap 3345421 3345421 3345422 3345428, overlap 3345420 3345428 ACACGCTTGTATAAC TTAAAAAGCGCAC ACTT GTGCGCTTTTTAC ATTTTGTATCCTTTT TERM 3934 3345421 - 3345451 + F 93 -10.7 -4.6709 | gap 1, opp_overlap 3345421 3345420 3345428, overlap 3345421 3345422 3345428 ACACGCTTGTATAAC T-TAAAAAGCGCAC ACTT GTGCGCTTTTTACA TTTTGTATCCTTTTA TERM 3935 3345422 - 3345449 + F 100 -15.8 -2.6155 | opp_overlap 3345421 3345420 3345428, overlap 3345421 3345421 3345428 CACGCTTGTATAACT TAAAAAGCGCAC ACTT GTGCGCTTTTTA CATTTTGTATCCTTT TERM 3936 3345443 - 3345428 - f 93 -10.4 -4.78149 | opp_overlap 3345422 3345421 3345421 3345428, overlap 3345421 3345420 TGTATAACTTAAAAA GCGCAC ACTT GTGCGC TTTTTACATTTTGTA TERM 3937 3345428 - 3345443 + F 93 -10.4 -4.89729 | opp_overlap 3345428 3345421 3345420, overlap 3345422 3345421 3345421 TGTATAACTTAAAAA GCGCAC ACTT GTGCGC TTTTTACATTTTGTA TERM 3938 3346978 - 3346963 - g 70 -7.6 -3.83205 | ATCGCTTATATTAAA GGTGAA AAAG TTCACC TGATCGAAAACAGCG TERM 3939 3347002 - 3346989 - g 75 -8.1 -4.1899 | TCACCTGATCGAAAA CAGCG CAAT CGCTG GCCCTGTAAATGCAA Shew185_2791 3345754 - 3347070 + | membrane protein involved in aromatic hydrocarbon degradation TERM 3940 3347092 - 3347108 + F 100 -9.4 -5.47431 | opp_overlap 3347092 CGCTTAACCCCAAAA GCCGCA TTTTT TGCGGC TTTTTTGTATCTTAA TERM 3941 3347108 - 3347092 - f 89 -9.4 -4.19238 | opp_overlap 3347092 CGCTTAACCCCAAAA GCCGCA TTTTT TGCGGC TTTTTTGTATCTTAA Shew185_2792 3347174 - 3347560 + | hypothetical protein TERM 3942 3347595 - 3347575 - f 89 -10.5 -4.15044 | GCCCGTCTCAATAAA GCGACATCA AGC TGATATCGC CAACTTGTCTCCCTC TERM 3943 3347729 - 3347747 + G 86 -8 -4.99043 | AAAATAACATCCTTC CTGCCCTG CTG CTGGGCGG TTTTCTTTGTGCAGG TERM 3944 3347957 - 3347945 - g 75 -3.3 -5.14563 | opp_overlap 3347946 3347949, overlap 3347930 3347946 3347949 CGGTTCAGCAAAAAA CCGAC CGC GTCGT GGCGTTTTTAAAGGA Shew185_2793 3347707 - 3348423 + | hypothetical protein TERM 3945 3348487 - 3348456 - f 75 -10.2 -2.94888 | opp_overlap 3348458 3348462 3348465, overlap 3348465 AACTCACTGAAACGA TGGGAATAAGGCAC TTAT GGGCCTTATTCCTA AATTAGGGAAATACA TERM 3946 3348458 - 3348485 + F 83 -12.8 -2.52676 | opp_overlap 3348456 3348465, overlap 3348462 3348465 CTCACTGAAACGATG GGAATAAGGCAC TTAT GGGCCTTATTCC TAAATTAGGGAAATA TERM 3947 3348757 - 3348739 - g 74 -6.6 -4.38129 | ATAGAAGCAGTAAAA GCGGCGAC TGT GTCAGCGC AAACCTCTGGTCGTA Shew185_2794 3348595 - 3349608 + | RND family efflux transporter MFP subunit TERM 3948 3351043 - 3351068 + G 71 -4.7 -4.53705 | gap 1 CTGGCGACGTTCACT GTTATC-GCGGC ACT GCTGCCGATGGC TTTTGTATCGGGCTT TERM 3949 3351312 - 3351300 - g 73 -5.5 -4.56597 | CCTGCTGGGTAAAAA TGCCC GTA AGGCA AGAATGGGACTGGCT TERM 3950 3351681 - 3351643 - g 76 -2.2 -5.26316 | overlap 3351645 CTAGTCGATAAAAAA CACCGCAAACGCGACAGC CAC ACCATAGCGGTATCGGTG CGAGACGAACTGCAG TERM 3951 3352767 - 3352779 + G 71 -6.3 -4.16158 | TTTCAATGGCTTAGC GATCA GTC TGATC TTTGGTATTTTTATC Shew185_2795 3349645 - 3352887 + | acriflavin resistance protein TERM 3952 3352915 - 3352898 - f 76 -7 -4.40132 | ACTAACCACAACAAA GGCCAT TACAAG ATGGCC TCAAGGAGTAAGGTA Shew185_2796 3352930 - 3353142 + | hypothetical protein Shew185_2797 3353247 - 3353663 + | rhodanese domain-containing protein TERM 3953 3353774 - 3353761 - T 89 -9.5 -4.14392 | opp_overlap 3353761 GTTTAACGGCTAAAA GCGCC CTAA GGCGC TTTTTTATTGTCTAA TERM 3954 3353761 - 3353774 + T 100 -9.5 -5.60689 | opp_overlap 3353761 GTTTAACGGCTAAAA GCGCC CTAA GGCGC TTTTTTATTGTCTAA Shew185_2798 3354494 - 3354003 - | GCN5-related N-acetyltransferase TERM 3955 3355235 - 3355213 - H 77 -5 -4.88786 | ATGAAAACAAATAAA TCAATATAAA GTA CTCATATTGA CCGTAAATTCGCATT TERM 3956 3355680 - 3355668 - g 80 -6.9 -4.81249 | overlap 3355669 TGTGAAATTTAAAAA CGCCG ATG CAGCG GCCATTATGTCGGCC Shew185_2799 3355507 - 3357966 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 3957 3358038 - 3358009 - T 93 -13.7 -3.23697 | opp_overlap 3358014, overlap 3358014 ATGAAAGTAATAAAT GAAAAGAGCCTGC TATC GCAGGCTCTTTTT TTACAAGACATGTTA TERM 3958 3358014 - 3358033 + T 100 -13.6 -5.40072 | opp_overlap 3358009 3358014 AGTAATAAATGAAAA GAGCCTGC TATC GCAGGCTC TTTTTTTACAAGACA TERM 3959 3358033 - 3358014 - T 100 -13.6 -4.68846 | opp_overlap 3358014, overlap 3358009 AGTAATAAATGAAAA GAGCCTGC TATC GCAGGCTC TTTTTTTACAAGACA Shew185_2800 3358596 - 3358051 - | YaeQ family protein TERM 3960 3358651 - 3358675 + r 95 -14.4 -3.05384 | opp_overlap 3358649 3358648 ATCCTAAAATAAGGC TGCCGAGTCT ACCTG AGACTCGGCA TTAGCTCAAACGAAC Shew185_2801 3359667 - 3358756 - | siroheme synthase Shew185_2802 3360046 - 3359687 - | rhodanese domain-containing protein Shew185_2803 3360492 - 3360175 - | hypothetical protein TERM 3961 3360705 - 3360689 - R 100 -9.4 -5.81412 | opp_overlap 3360689 CTGAGGTAAAAAAAA GCCACC TCGTC GGTGGC TTTTTAACTCGAATG TERM 3962 3360689 - 3360705 + r 93 -9.4 -4.66609 | opp_overlap 3360689 CTGAGGTAAAAAAAA GCCACC TCGTC GGTGGC TTTTTAACTCGAATG Shew185_2804 3361674 - 3360727 - | preprotein translocase subunit SecF Shew185_2805 3363537 - 3361687 - | preprotein translocase subunit SecD TERM 3963 3362437 - 3362452 + g 70 -7.6 -3.86252 | opp_overlap 3362428 GATGAACAATGTCGC CATAGG CTTG CCTATG TTGTCTTTGGTCACG Shew185_2806 3363887 - 3363555 - | preprotein translocase subunit YajC Shew185_2807 3365038 - 3363914 - | queuine tRNA-ribosyltransferase TERM 3964 3365079 - 3365090 + r 70 -5.8 -4.41494 | TGACTACATTTTTAA TGGC TAAT GCCA TTTTGATTAACAATA TERM 3965 3365180 - 3365152 - R 100 -8.8 -5.86061 | opp_overlap 3365152 3365154, overlap 3365154 TTTGACGAAAAAAAA TTGCCGCCCATA CTCAC TTTGGGCGGCTA TTTTAAAACAAAATC TERM 3966 3365152 - 3365180 + r 79 -8.8 -4.07885 | opp_overlap 3365152 3365154, overlap 3365154 TTTGACGAAAAAAAA TTGCCGCCCATA CTCAC TTTGGGCGGCTA TTTTAAAACAAAATC TERM 3967 3365154 - 3365178 + r 88 -11.4 -3.63744 | opp_overlap 3365152 3365154, overlap 3365152 TGACGAAAAAAAATT GCCGCCCATA CTCAC TTTGGGCGGC TATTTTAAAACAAAA TERM 3968 3365178 - 3365154 - R 81 -11.4 -3.05247 | opp_overlap 3365154 3365152, overlap 3365152 TGACGAAAAAAAATT GCCGCCCATA CTCAC TTTGGGCGGC TATTTTAAAACAAAA Shew185_2808 3366238 - 3365201 - | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Shew185_2809 3366511 - 3366302 - | hypothetical protein TERM 3969 3366657 - 3366674 + H 79 -11.3 -2.62463 | overlap 3366656 TGCATTTTTGGCTTC CGCGCTT TCCT AAGCGCG CTTGTGCATGATACC Shew185_2810 3366722 - 3367351 + | hypothetical protein Shew185_2811 3367421 - 3368092 + | pseudouridine synthase TERM 3970 3368128 - 3368160 + T 72 -8.4 -3.61652 | opp_overlap 3368128, overlap 3368124 CCCATAAAACCAAAA GGTCGCGACTTAGC ACAGA GCTAAAATGCGACC TTAGTTATTTACGGA TERM 3971 3368160 - 3368128 - T 88 -8.4 -4.73108 | opp_overlap 3368128 3368124 CCCATAAAACCAAAA GGTCGCGACTTAGC ACAGA GCTAAAATGCGACC TTAGTTATTTACGGA Shew185_2812 3368631 - 3368191 - | hypothetical protein TERM 3972 3368837 - 3368867 + H 75 -5.5 -4.6635 | GGCAGCTAAAAGACT GATCTAGCGAGCT GAATG AGCTTGTTACATC TTTTATTGCCAATTT Shew185_2813 3368983 - 3370362 + | oxidoreductase domain-containing protein TERM 3973 3370407 - 3370429 + T 90 -7.1 -5.30348 | gap 1, opp_overlap 3370407 GCACCGCCACCATAA GGATAAGTGC CTCG GC-CTTATCC TTTTTCTTATTCAAT Shew185_2814 3371088 - 3370552 - | NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 TERM 3974 3371115 - 3371096 - R 100 -10 -5.61596 | opp_overlap 3371096 ACTCCCATAAAAAAA GCAGCCAC CTAA GTGACTGC TTCCATAATACTTTT Shew185_2815 3372378 - 3371152 - | serine/threonine transporter SstT TERM 3975 3372567 - 3372538 - R 93 -7.3 -5.43487 | gap 1, opp_overlap 3372545, overlap 3372542 3372545 AAAGCATACAAAAAA CTA-ACAAGCGCCA GAT TAGCGCTTGTCTAA GGCGAGATCGGCGCC TERM 3976 3372562 - 3372542 - R 91 -11.9 -4.01646 | opp_overlap 3372545, overlap 3372538 3372545 CATACAAAAAACTAA CAAGCGCCA GAT TAGCGCTTG TCTAAGGCGAGATCG TERM 3977 3372559 - 3372545 - R 75 -7.8 -4.08846 | opp_overlap 3372545, overlap 3372542 3372538 ACAAAAAACTAACAA GCGCCA GAT TAGCGC TTGTCTAAGGCGAGA Shew185_2816 3373449 - 3372553 - | putative CheW protein Shew185_2817 3374060 - 3373590 - | dual specificity protein phosphatase TERM 3978 3373782 - 3373762 - G 75 -10.5 -3.36327 | TTACCCGAGCGACAA TGGATCACC ACA GGTAATCCA TCGGCTTCACACTGC Shew185_2818 3375416 - 3374133 - | DEAD/DEAH box helicase domain-containing protein TERM 3979 3375224 - 3375238 + g 71 -7.1 -4.07568 | GCTGCAACAGCGGCA CGGCA AAGGC TGCCG TTTTACCCGAGCCCG Shew185_2819 3376021 - 3375464 - | methylated-DNA--protein-cysteine methyltransferase Shew185_2820 3377834 - 3376137 - | alcohol dehydrogenase TERM 3980 3376656 - 3376644 - G 70 -7.7 -3.81557 | CGCTTCAAACAAAGA TCCTG CGC CAGGA ATGCGCAATCCCGAA TERM 3981 3377714 - 3377704 - G 80 -8.2 -4.31692 | AACTTACCATCAAAA CGCG GAT CGCG GCTCATCCTCGCCTC TERM 3982 3378239 - 3378219 - g 100 -5.5 -5.75342 | GCTTGTGAAAAAAAA TCCTGAAAC CTT ATTTCAAGA CGAAGGCACAACATT TERM 3983 3378442 - 3378411 - g 79 -11.7 -3.14602 | opp_overlap 3378396, overlap 3378409 GTCATTTTATCAAGA TGACTTTGCTGGC CGAATC GCCACCAAAGTCA TGCAAACCTCCCTAG Shew185_2821 3378007 - 3379836 + | ABC transporter related TERM 3984 3379857 - 3379882 + T 100 -11.9 -5.37043 | opp_overlap 3379858, overlap 3379858 AGGTTAAATAACGAA AGCGACACTCA GCAG TGAGTGTCGCC TTTTTTATCTCAAGT TERM 3985 3379881 - 3379858 - T 100 -15.4 -4.14764 | opp_overlap 3379858 3379857 GGTTAAATAACGAAA GCGACACTCA GCAG TGAGTGTCGC CTTTTTTATCTCAAG TERM 3986 3379858 - 3379881 + T 100 -15.4 -3.81141 | opp_overlap 3379858, overlap 3379857 GGTTAAATAACGAAA GCGACACTCA GCAG TGAGTGTCGC CTTTTTTATCTCAAG TERM 3987 3380370 - 3380383 + T 82 -8.1 -4.52143 | opp_overlap 3380370 TCAGACACAAAAAAA CCACC TTGA GGTGG TTTATTGTCTTTAAC TERM 3988 3380383 - 3380370 - T 100 -8.1 -5.76633 | opp_overlap 3380370 TCAGACACAAAAAAA CCACC TTGA GGTGG TTTATTGTCTTTAAC Shew185_2822 3383775 - 3382366 - | glutamyl-tRNA synthetase TERM 3989 3382709 - 3382691 - G 71 -7.4 -4.03978 | opp_overlap 3382690 3382687 3382697 AAGTCTTCATAGAAA TAGCGGCT AGA AGCGGCTA ACTCTTTTAGTGTCT TERM 3990 3382773 - 3382784 + g 77 -3 -5.1861 | opp_overlap 3382781 CTAATGCTGGGCCGT TTGA CAGA TCAA TTTTTTGATCGTCCA Shew185_2823 3385321 - 3385551 + | hypothetical protein Shew185_2824 3386018 - 3387037 + | TRAP dicarboxylate transporter, DctP subunit TERM 3991 3387085 - 3387041 - f 77 -8 -4.26693 | gap 1, opp_overlap 3387047, overlap 3387049 GCAAATAAATAATAA TGATGATAGCCGCTCAATCTC AACC GAGGTTAAGCGGCCATT-TCA GCGAGGGGATTATGG TERM 3992 3387047 - 3387080 + F 79 -10.3 -3.53091 | opp_overlap 3387041 3387049 AAATAATAATGATGA TAGCCGCTCAATCTC AACC GAGGTTAAGCGGCCA TTTCAGCGAGGGGAT TERM 3993 3387078 - 3387049 - f 90 -12.9 -2.89822 | opp_overlap 3387047, overlap 3387041 ATAATAATGATGATA GCCGCTCAATCTC AACC GAGGTTAAGCGGC CATTTCAGCGAGGGG TERM 3994 3387369 - 3387351 - g 73 -5.3 -4.56775 | ACCTCGGGCCAAAAA GATAACG TCCCT CGTTACC GCCTTTGTCTGTATC TERM 3995 3387713 - 3387701 - g 70 -7.7 -3.79668 | ATTTAATCGATGAAA GCGTT AAA AACGC CAATGAAGAACCCGT Shew185_2825 3387097 - 3387753 + | tripartite ATP-independent periplasmic transporter DctQ TERM 3996 3387807 - 3387826 + G 81 -7.8 -4.58663 | ATGTTTCTCGGTATG CCTATCGC TATC GCGTTAGG TTTTTCCAGCATGCT Shew185_2826 3387753 - 3389150 + | TRAP dicarboxylate transporter, DctM subunit TERM 3997 3389201 - 3389220 + F 100 -13.6 -4.80453 | opp_overlap 3389205 ACAGTTAGTTTTTAA GCGAGCCT AGTC AGGCTCGC TTTGTTTTATGATGC TERM 3998 3390581 - 3390561 - g 74 -11.2 -2.92389 | opp_overlap 3390561 GAACTGACCGATAGA TTGGCCGA TATTG TCGGCCAA TTTAAAAGCTTCACT TERM 3999 3390561 - 3390581 + G 83 -11.9 -3.5774 | opp_overlap 3390561 GAACTGACCGATAGA TTGGCCGAT ATT GTCGGCCAA TTTAAAAGCTTCACT Shew185_2827 3389280 - 3391076 + | integral membrane sensor signal transduction histidine kinase TERM 4000 3392224 - 3392238 + G 71 -8.5 -3.75461 | opp_overlap 3392233 CGCTTTGTACTGCTG GGCGG AGAAG CCGCC TTTGCTGGCACTTTG Shew185_2828 3391081 - 3392460 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 4001 3392515 - 3392477 - T 93 -13.3 -3.41051 | gap 1, opp_overlap 3392489, overlap 3392479 3392481 TCATTTCGATGACAA GATAGTAGTGAACCCAGC TTGA GCTGGGTTCGCTACCA-C AGCATAAGAACGAGT TERM 4002 3392514 - 3392479 - T 100 -17 -3.27653 | opp_overlap 3392489, overlap 3392477 3392481 ATTTCGATGACAAGA TAGTAGTGAACCCAGC TTGA GCTGGGTTCGCTACCA CAGCATAAGAACGAG TERM 4003 3392512 - 3392481 - T 100 -17.4 -3.20322 | opp_overlap 3392489, overlap 3392479 3392477 TTCGATGACAAGATA GTAGTGAACCCAGC TTGA GCTGGGTTCGCTAC CACAGCATAAGAACG TERM 4004 3392489 - 3392504 + T 75 -10.4 -3.05384 | opp_overlap 3392481 3392479 3392477 CAAGATAGTAGTGAA CCCAGC TTGA GCTGGG TTCGCTACCACAGCA Shew185_2829 3392992 - 3392543 - | hypothetical protein Shew185_2830 3393436 - 3393002 - | hypothetical protein Shew185_2831 3393533 - 3394471 + | LysR family transcriptional regulator TERM 4005 3394665 - 3394637 - T 100 -11.9 -4.81551 | opp_overlap 3394637 3394641, overlap 3394641 GACCCATACCAAAAA TAAAGGCCAAC GGTTGAT GTTGGCCTTTA TTCATTTGATTTAAT TERM 4006 3394637 - 3394665 + T 90 -12.6 -3.66117 | opp_overlap 3394637 3394641, overlap 3394641 GACCCATACCAAAAA TAAAGGCCAACG GTTGA TGTTGGCCTTTA TTCATTTGATTTAAT TERM 4007 3394641 - 3394661 + T 86 -9 -4.42206 | opp_overlap 3394637 3394641, overlap 3394637 CATACCAAAAATAAA GGCCAACG GTTGA TGTTGGCC TTTATTCATTTGATT TERM 4008 3394661 - 3394641 - T 90 -8.3 -4.94262 | opp_overlap 3394641 3394637, overlap 3394637 CATACCAAAAATAAA GGCCAAC GGTTGAT GTTGGCC TTTATTCATTTGATT Shew185_2832 3395996 - 3394749 - | major facilitator transporter TERM 4009 3395517 - 3395499 - G 77 -4.4 -5.0916 | overlap 3395501 3395511 TTGCCAAGATAAAAA CTGCGACA TAA CGCCGCCG AGTAAACGGCCAACA TERM 4010 3395881 - 3395860 - G 71 -6.6 -4.16943 | gap 1, opp_overlap 3395860 3395875 CCTGATACCGCAAAA TGCT-CCGC AATTA GCGGCAGCA TGCCTTGCATCAGAT TERM 4011 3396249 - 3396228 - g 73 -9.5 -3.3244 | overlap 3396226 CCAAAAAACTGAATA TGGCTCAAC CGGC GTTAAGCCA AAGTATCAAGCGCTT Shew185_2833 3396149 - 3397030 + | LysR family transcriptional regulator TERM 4012 3397048 - 3397079 + T 100 -13.2 -4.88228 | opp_overlap 3397053, overlap 3397053 TCAATCGATTAAAAC AAAAAGGGCTGATA TCAA TATCAGCCCTTTTC TTTTTACTATTAAAT TERM 4013 3397074 - 3397053 - T 100 -13.1 -5.50723 | opp_overlap 3397053 3397048 CGATTAAAACAAAAA GGGCTGATA TCAA TATCAGCCC TTTTCTTTTTACTAT TERM 4014 3397053 - 3397074 + T 100 -13.1 -5.32396 | opp_overlap 3397053, overlap 3397048 CGATTAAAACAAAAA GGGCTGATA TCAA TATCAGCCC TTTTCTTTTTACTAT Shew185_2834 3401024 - 3397128 - | protease domain-containing protein TERM 4015 3397742 - 3397756 + g 75 -5.6 -4.72029 | CCTCTAAAGTGTAAA CGCGGG TTT CTTGCG TTTTGTTCGCTTCGA TERM 4016 3401255 - 3401282 + r 71 -7.2 -3.9243 | AATCGTATATCAGCT TCTATTTATCTT AAAA AAGAGAAATAGA TTGTTTCGCAGGTTG TERM 4017 3401341 - 3401331 - R 89 -5.4 -5.38054 | GCTCATAAACAAAAA TGTG AAA CACA AATAGTTATTTAAAA TERM 4018 3401525 - 3401489 - R 78 -2.7 -5.42198 | gap 1, overlap 3401496 TTTTAAAAAATAAAA TTAAACACAAATTAAA CTTACC TTTAACTTGT-TTTAA ACAAAATTAGTATGA TERM 4019 3401701 - 3401676 - R 100 -12.7 -5.38249 | ATTAACCACAAAAAA GCCCTTCCAAT ATAA ATTGAAAGGGC TACATCTTCAGCAAT Shew185_2835 3402152 - 3401751 - | hypothetical protein Shew185_2836 3403020 - 3402154 - | acyl-CoA thioesterase II Shew185_2837 3404050 - 3403112 - | short-chain dehydrogenase/reductase SDR Shew185_2838 3404417 - 3405292 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 4020 3405388 - 3405362 - T 91 -11 -4.46073 | opp_overlap 3405362 CCTGAATACAACAAA GGTTCGTATC TGTCGAG GATACGAACC TTTTTTATTGGCTAA TERM 4021 3405362 - 3405388 + T 100 -11.7 -5.4833 | opp_overlap 3405362 CCTGAATACAACAAA GGTTCGTATCT GTCGA GGATACGAACC TTTTTTATTGGCTAA Shew185_2839 3406285 - 3405470 - | extradiol ring-cleavage dioxygenase class III protein subunit B Shew185_2840 3406829 - 3406347 - | DoxX family protein Shew185_2841 3406992 - 3407891 + | LysR family transcriptional regulator TERM 4022 3408005 - 3407977 - T 93 -12.5 -3.96327 | opp_overlap 3407982, overlap 3407982 ACTCTCGAGCATAAA CAAAACGCCCCTC GAT AAGGGGCGTTTTT CATTTTAATAACAGG TERM 4023 3407982 - 3408000 + T 100 -11.7 -5.1166 | opp_overlap 3407977 3407982 CGAGCATAAACAAAA CGCCCCT CGATA AGGGGCG TTTTTCATTTTAATA TERM 4024 3408000 - 3407982 - T 100 -12.4 -5.02323 | opp_overlap 3407982, overlap 3407977 CGAGCATAAACAAAA CGCCCCTC GAT AAGGGGCG TTTTTCATTTTAATA Shew185_2842 3409573 - 3408047 - | 6-phosphogluconate dehydrogenase TERM 4025 3408571 - 3408583 + g 70 -7.7 -3.93583 | overlap 3408579 CGATAGCAGGTGCGT TTGGC CCA GCCAA TTTCTGGCTAAGTTG TERM 4026 3409230 - 3409181 - G 71 -4.6 -4.64766 | gap 3, overlap 3409187 CGCAGAGCTGAAAAA TACAAACTGAC-CT-TTGTAGCGCG CTT CACGCT-CAACAGTGTCAGTCCATA GGCTGTTACCAGTAT TERM 4027 3409224 - 3409187 - G 75 -5.8 -4.55887 | gap 3, overlap 3409181 GCTGAAAAATACAAA CTGAC-CT-TTGTAGCGCG CTT CACGCT-CAACAGTGTCAG TCCATAGGCTGTTAC Shew185_2843 3410095 - 3409781 - | small multidrug resistance protein TERM 4028 3410322 - 3410366 + r 79 -9.4 -3.64103 | opp_overlap 3410328, overlap 3410328 TAAAAGTACCGTAAA CAAAAAGGCGATAGCAAGCT TGGTC AGTTTACTATCGCCTTGATG TTTCAACTCTCGATA TERM 4029 3410360 - 3410328 - R 100 -11.4 -5.28942 | opp_overlap 3410328 3410322 TACCGTAAACAAAAA GGCGATAGCAAGCT TGGTC AGTTTACTATCGCC TTGATGTTTCAACTC TERM 4030 3410328 - 3410360 + r 88 -11.4 -3.46285 | opp_overlap 3410328, overlap 3410322 TACCGTAAACAAAAA GGCGATAGCAAGCT TGGTC AGTTTACTATCGCC TTGATGTTTCAACTC Shew185_2844 3412383 - 3410425 - | AMP-dependent synthetase and ligase TERM 4031 3410518 - 3410534 + g 80 -7.3 -4.63527 | CGCTGGTGCGGTATA TTGCTGA TTA TCGGCAA TTTTTCGCATAGTAC Shew185_2845 3412675 - 3413082 + | MerR family transcriptional regulator TERM 4032 3413649 - 3413623 - g 74 -10.9 -3.07344 | TGAGTGGTGAACATA TTGGCGCACTC GCCAT GAGTGAGCCAA ACGCAGGTTCTGACG TERM 4033 3414221 - 3414207 - g 71 -9.2 -3.6003 | opp_overlap 3414207 3414206 GAAACCACCCGTAAA GACGCC GCG GGCGCC ATTCTGTATAGCGCA Shew185_2846 3413244 - 3414413 + | acyl-CoA dehydrogenase domain-containing protein TERM 4034 3414657 - 3414672 + G 82 -10.4 -3.90318 | TCGGCGGCGGCCCAG TGGCGC TGGA GCGCCA TTTATCCCGTGGTAA TERM 4035 3414786 - 3414800 + G 85 -11.4 -3.64487 | opp_overlap 3414785 3414786 TCTACGACGAAGAAG TGCCCG CAG CGGGCA TTATTGCCGGTATCG TERM 4036 3414800 - 3414786 - g 76 -11.4 -2.84693 | opp_overlap 3414786, overlap 3414785 TCTACGACGAAGAAG TGCCCG CAG CGGGCA TTATTGCCGGTATCG Shew185_2847 3414530 - 3416137 + | propionyl-CoA carboxylase TERM 4037 3416274 - 3416264 - g 71 -8.2 -3.62046 | opp_overlap 3416255 TTACGCGCTCAATAA CGGC GTT GCCG AGCTTATTCTTGACC TERM 4038 3416933 - 3416917 - g 75 -11.5 -2.66964 | overlap 3416914 CCATTGATTACACTA GCGAGCG TAT CGCCCGC ATTCGGGTATCAACC Shew185_2848 3416187 - 3417059 + | enoyl-CoA hydratase/isomerase TERM 4039 3417150 - 3417132 - g 77 -8.8 -4.30576 | overlap 3417133 GTCGCATCATCAAAA CCGCCCAT GCC ATGGGCGT TCGCACCGTTGCCTT TERM 4040 3417149 - 3417133 - g 82 -12.3 -3.18024 | overlap 3417132 TCGCATCATCAAAAC CGCCCAT GCC ATGGGCG TTCGCACCGTTGCCT TERM 4041 3418855 - 3418841 - g 70 -7.8 -3.9461 | GTGGTCGAAGAACAA GCCAGC AAT GCTGAC AAGTTAAAAGCCCCC Shew185_2849 3417059 - 3419119 + | carbamoyl-phosphate synthase L chain ATP-binding TERM 4042 3419679 - 3419665 - g 71 -8.6 -3.72576 | opp_overlap 3419667 TGGGCTGTTACGAAA TATCGC TCG GCGATA CTATCGGTGTAGGCA Shew185_2850 3419121 - 3420044 + | pyruvate carboxyltransferase TERM 4043 3420085 - 3420104 + F 80 -7.8 -4.37886 | opp_overlap 3420085 AACCGTTATTAAAAA CGCGCG TTATTTCC CGCGCG TTTTCTACAGCATAA TERM 4044 3420104 - 3420085 - f 84 -7.8 -4.73388 | opp_overlap 3420085 AACCGTTATTAAAAA CGCGCG TTATTTCC CGCGCG TTTTCTACAGCATAA TERM 4045 3420478 - 3420460 - g 75 -3.7 -5.06451 | opp_overlap 3420461 3420474, overlap 3420450 3420461 CATTAGCGGAAAAAA TCCGCGC AGGTG GCGCAGG TATTCCGGCATTTTT Shew185_2851 3420132 - 3420836 + | 3-oxoacid CoA-transferase, A subunit Shew185_2852 3420964 - 3421620 + | 3-oxoacid CoA-transferase, B subunit TERM 4046 3421701 - 3421721 + F 100 -11.2 -5.42975 | opp_overlap 3421701 TTTTATACCTTAAAA GCCCAGAA GATCA TTCTGGGC TTTTTGTTTATCTAG TERM 4047 3421721 - 3421701 - f 93 -11.2 -4.16943 | opp_overlap 3421701 TTTTATACCTTAAAA GCCCAGAA GATCA TTCTGGGC TTTTTGTTTATCTAG TERM 4048 3422128 - 3422112 - g 76 -10.9 -3.18264 | opp_overlap 3422111 TGTTGCAGGGATTAA TTGGCCT TCA AGGCCAA GTCTATAAATTGCGG Shew185_2853 3421964 - 3422365 + | hypothetical protein Shew185_2854 3422454 - 3423056 + | ThiJ/PfpI domain-containing protein Shew185_2855 3423095 - 3423427 + | hypothetical protein TERM 4049 3423807 - 3423821 + G 73 -7.8 -4.08394 | ACTGCCCGGGTATAT CGCCAG TGC TTGGCG TTTTAGAAAGGATAT TERM 4050 3423969 - 3423981 + G 75 -6.2 -4.49316 | TTGGCTGATTTTACT GGCC ACCGC GGCC TTTATTGTTGGTCCT Shew185_2856 3423646 - 3424404 + | hypothetical protein Shew185_2857 3424591 - 3425811 + | glucose sorbosone dehydrogenase Shew185_2858 3427122 - 3426130 - | hypothetical protein TERM 4051 3427200 - 3427190 - R 71 -6.8 -4.07687 | overlap 3427191 AGTTTTGGGGCAAAA TGGC GCA GCCA CCCCAAAACGCAGCG Shew185_2859 3428381 - 3427257 - | restriction endonuclease TERM 4052 3428532 - 3428521 - R 81 -7.2 -4.60487 | opp_overlap 3428521, overlap 3428511 CACCATCTGGAAAAA CGCG CATG CGCG TTTCCCAAACCTATT TERM 4053 3429361 - 3429327 - R 100 -15.2 -5.10064 | opp_overlap 3429327 3429334, overlap 3429328 TTTAAGAGATAAAAA TCACAAAGAGCGTTCT TAA AGAACACTCTTTGTGG TTAGCTTGCGGTGGT TERM 4054 3429327 - 3429361 + r 100 -15.2 -3.18452 | opp_overlap 3429327 3429328, overlap 3429334 TTTAAGAGATAAAAA TCACAAAGAGCGTTCT TAA AGAACACTCTTTGTGG TTAGCTTGCGGTGGT TERM 4055 3429360 - 3429328 - R 100 -18.7 -3.64954 | opp_overlap 3429327 3429334, overlap 3429327 TTAAGAGATAAAAAT CACAAAGAGCGTTCT TAA AGAACACTCTTTGTG GTTAGCTTGCGGTGG TERM 4056 3429334 - 3429354 + r 79 -8.3 -4.07975 | opp_overlap 3429328 3429327, overlap 3429327 GATAAAAATCACAAA GAGCGTTCT TAA AGAACACTC TTTGTGGTTAGCTTG Shew185_2860 3432494 - 3429417 - | hypothetical protein TERM 4057 3429600 - 3429588 - G 75 -5.5 -4.66938 | opp_overlap 3429596 ATCCCCAAGATAAAA CACGA AGG TCGCG GTGCGGTTCATGGCA TERM 4058 3430076 - 3430086 + g 77 -4.6 -4.9792 | TCACTTGCACTCGAA CGTC ACG GGCG TTTTTATGTCGCGTC Shew185_2861 3433207 - 3432629 - | thymidine kinase TERM 4059 3433893 - 3433838 - g 71 -8.5 -3.62096 | gap 3, overlap 3433840 3433841 3433874 GGCGATGATGGCAAA GATGGTGTCGATGGCACGCCAGGTATTC CGG GAACACCTGGCACGCC-TGG-CAC-ACC CGGAGAACCCGGAAC TERM 4060 3433894 - 3433840 - g 85 -12.3 -3.39018 | overlap 3433838 3433841 3433874 CGATGATGGCAAAGA TGGTGT-CGATGGCACGCCAGGTATTC CGG GAACACCTGGCACGCC-TGGCACACCC GGAGAACCCGGAACA TERM 4061 3433893 - 3433841 - g 100 -15.8 -2.63089 | overlap 3433838 3433840 3433874 GATGATGGCAAAGAT GGTGT-CGATGGCACGCCAGGTATTC CGG GAACACCTGGCACGCC-TGGCACACC CGGAGAACCCGGAAC TERM 4062 3435095 - 3435073 - g 73 -4.9 -4.7373 | CGACGGCACTAAAAA TATCTGTCA TTTAC TGACGGATA TCAGCGCAGTGAATG Shew185_2862 3433751 - 3435847 + | hypothetical protein TERM 4063 3435924 - 3435947 + F 93 -7.4 -5.47218 | opp_overlap 3435917 3435924, overlap 3435917 AAGGAAATCGCCAAA GGAGTCTCAT CAAC ACGGGACTCC TTTTTTTAGATACAG TERM 4064 3437006 - 3436987 - g 75 -7.8 -4.2717 | ATTAGGTTATGAAAA CTGGGCGA GTTA TCGCCTAG CGCCACAAATGGCCA TERM 4065 3437921 - 3437896 - g 71 -4.7 -4.58283 | gap 1, overlap 3437884 3437911 3437913 CAATGCCCTGAAAAA GCACGGC-TTAA ACA TCAGCGCCGTGC CGCCACGCTATAAAT Shew185_2863 3436049 - 3438199 + | peptidyl-dipeptidase Dcp TERM 4066 3438330 - 3438308 - T 100 -13.5 -5.63103 | opp_overlap 3438308 CGTTAACCAAAAAAA TCAGCCAGC GTAAT GCTGGCTGA TTTATTTGTAGCAGT TERM 4067 3438308 - 3438330 + T 100 -14.2 -4.55697 | opp_overlap 3438308 CGTTAACCAAAAAAA TCAGCCAGCG TAA TGCTGGCTGA TTTATTTGTAGCAGT Shew185_2864 3439934 - 3438366 - | Na+/H+ antiporter NhaC TERM 4068 3438801 - 3438777 - G 75 -5.7 -4.57073 | gap 1, overlap 3438764 GAGCGCTGGCAAAAA CGCGAACGGA ATATTG CCCG-TCGCG AGACTCGCCATAAAC TERM 4069 3439449 - 3439436 - G 73 -8.1 -4.08279 | ATACTGGAGAAATAA CGCAC ACAG GTGCG GCAGTCGAATCTAAT TERM 4070 3439794 - 3439773 - G 85 -9.5 -4.36903 | opp_overlap 3439772 GCCATTAAATACAAA TTCACCCGT CGCT ACAGGTGAA AATTGATTGAGCAAT TERM 4071 3440228 - 3440213 - R 70 -8.2 -3.63515 | CTCTACTTCTAAGAA CGCCCG TACC CGAGCG TGAGGCACATAAAAA TERM 4072 3440284 - 3440244 - R 70 -3.4 -4.99035 | overlap 3440246 3440249 3440274 3440283 TGAGGCACATAAAAA CA-TAAGCGGCTTAGCAGAT GCT AGC-GCAAAGCCACTTAATG TGACCTAGATCACAG Shew185_2865 3441232 - 3440306 - | electron transfer flavoprotein alpha subunit Shew185_2866 3441982 - 3441233 - | electron transfer flavoprotein alpha/beta-subunit TERM 4073 3442038 - 3442021 - H 85 -8.5 -4.45083 | TGTACATGGACAAAA CATTGGT TAAT ACCAATG CAGGATAGAGCAACT TERM 4074 3442561 - 3442551 - g 73 -2.4 -5.055 | overlap 3442541 GCAACCGCGAAAAAA CGCG CTC CTCG TCCAGCTAAATACCA Shew185_2867 3442293 - 3442685 + | histone family protein nucleoid-structuring protein H-NS TERM 4075 3442734 - 3442752 + F 93 -8.1 -5.38951 | opp_overlap 3442734 CCTATTTGCATAAAA GCTCGCA TTCAT TGCGGGC TTTTTTATATCCATT TERM 4076 3442752 - 3442734 - f 70 -5.9 -4.38712 | opp_overlap 3442734 CCTATTTGCATAAAA GCTCGCA TTCAT TGCGGGC TTTTTTATATCCATT Shew185_2868 3442901 - 3445990 + | amidohydrolase TERM 4077 3446874 - 3446857 - g 74 -2.7 -5.14563 | opp_overlap 3446859, overlap 3446859 GCCCTGACGAAAAAA TACCAAT TCAA ATTGGTG ATTGTCGGCGGATAC Shew185_2869 3445990 - 3447336 + | hypothetical protein TERM 4078 3447363 - 3447388 + F 100 -14.7 -4.15006 | ATAATAATATCGCAT CGGCGCAGCCT ACCA AGGCTGCGCAG TTTTCCCCTCAATCT Shew185_2870 3447415 - 3447795 + | putative lipoprotein TERM 4079 3447971 - 3447986 + F 72 -3.3 -5.09225 | AGGCGGTTATGATAC TTACC CTTTTA GGTAA TTTTTTGCATGACAT TERM 4080 3448330 - 3448313 - g 71 -7 -4.07885 | CAGTCTGTGGTAAAA CTGCAC GGCGTA GTGCAG CGCAAGGGCAAAGTG Shew185_2871 3447995 - 3448729 + | hypothetical protein Shew185_2872 3448730 - 3449374 + | hexapaptide repeat-containing transferase TERM 4081 3449598 - 3449581 - g 85 -7.7 -4.68132 | opp_overlap 3449581 CAACACAGAAAGAAA CTCCTGC CAAC GCAGAAG TCATTAGTCATCAAT TERM 4082 3449958 - 3449977 + G 73 -7.2 -4.15565 | gap 1, opp_overlap 3449956 ATCCAAACCAAATTC CGT-GACGA AGT TCGTCCACG TTTTGGCATGATGCG TERM 4083 3451195 - 3451181 - g 75 -3.4 -5.09762 | overlap 3451182 ATTTGAATACAAAAA CCGCCG TAC CGGTGA AAAGCAAGATATTCC Shew185_2873 3449541 - 3451256 + | prolyl-tRNA synthetase TERM 4084 3451329 - 3451295 - T 100 -13 -4.3534 | opp_overlap 3451300, overlap 3451300 GTTTAACGATCAAAA CGAAACGCACTTAAGC CCA GCTTAAGTGCGTTTTT TATTGGACTTTTATT TERM 4085 3451324 - 3451300 - T 100 -17.3 -4.24384 | opp_overlap 3451300, overlap 3451295 ACGATCAAAACGAAA CGCACTTAAGC CCA GCTTAAGTGCG TTTTTTATTGGACTT TERM 4086 3451300 - 3451324 + T 100 -17.3 -5.4756 | opp_overlap 3451295 3451300 ACGATCAAAACGAAA CGCACTTAAGC CCA GCTTAAGTGCG TTTTTTATTGGACTT Shew185_2874 3452286 - 3451369 - | helix-turn-helix domain-containing protein TERM 4087 3452509 - 3452495 - g 74 -2.7 -5.16841 | overlap 3452496 CCACATGAATAAAAA CCGGG TTACG CCCGT CACCTTACAAAAAAT Shew185_2875 3452472 - 3453314 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 4088 3453906 - 3453920 + G 87 -6.4 -5.0133 | opp_overlap 3453906 CTCTTGCTACAACAA CTCACG TTC TGTGAG TTTTTTCCAAGCATC TERM 4089 3454149 - 3454129 - g 71 -4.7 -4.57569 | TTAGGCGCTGAAAAA CTCTTAGTC ATT AACTTAGAG AGTCCACATAAGCAT Shew185_2876 3453451 - 3454575 + | patatin Shew185_2877 3454704 - 3455063 + | hypothetical protein TERM 4090 3455100 - 3455087 - f 89 -9.5 -4.17048 | opp_overlap 3455087 TGCTTGTTAAAACAA CCGCC TTAT GGCGG TTTTTTTTTTGACTA TERM 4091 3455087 - 3455100 + F 100 -9.5 -6.38039 | opp_overlap 3455087 TGCTTGTTAAAACAA CCGCC TTAT GGCGG TTTTTTTTTTGACTA TERM 4092 3455226 - 3455214 - g 85 -4.9 -5.4492 | CATATACACAAAAAA TTAGT ATC ACTAA TCACCCTCTCGCTTG Shew185_2878 3455196 - 3455903 + | putative lipoprotein Shew185_2879 3455914 - 3456699 + | hypothetical protein TERM 4093 3457704 - 3457677 - g 85 -7 -4.87893 | AATGCTAATCAAAAA CTACCATCTCAA GCAT CTGAGTTGGCAG CAACCTCTGTACAAG Shew185_2880 3456699 - 3459068 + | protein of unknown function DUF940 membrane lipoprotein putative TERM 4094 3459132 - 3459079 - T 89 -11.9 -3.74762 | opp_overlap 3459087 3459092, overlap 3459092 AATAGTTATTAATAA GCTGGAACTAAAACGGGCCGGATAA TGTA TTATCTGACCCGTTTTATTTCTACC TACGCCTAATCTGCT TERM 4095 3459087 - 3459124 + T 100 -15.1 -3.92075 | opp_overlap 3459079 3459092, overlap 3459092 TTAATAAGCTGGAAC TAAAACGGGCCGGATAA TGTA TTATCTGACCCGTTTTA TTTCTACCTACGCCT TERM 4096 3459092 - 3459119 + T 93 -10.6 -5.0065 | opp_overlap 3459079 3459092, overlap 3459087 AAGCTGGAACTAAAA CGGGCCGGATAA TGTA TTATCTGACCCG TTTTATTTCTACCTA TERM 4097 3459119 - 3459092 - T 91 -10.6 -4.41895 | opp_overlap 3459092 3459087, overlap 3459079 AAGCTGGAACTAAAA CGGGCCGGATAA TGTA TTATCTGACCCG TTTTATTTCTACCTA Shew185_2881 3460343 - 3459249 - | NADH:flavin oxidoreductase/NADH oxidase Shew185_2882 3460916 - 3460377 - | dTDP-4-dehydrorhamnose 3,5-epimerase Shew185_2883 3461130 - 3460906 - | glucose-1-phosphate thymidylyltransferase Shew185_2884 3462729 - 3461368 - | GAF sensor signal transduction histidine kinase Shew185_2885 3464267 - 3462726 - | response regulator receiver modulated metal dependent phosphohydrolase Shew185_2886 3464527 - 3464973 + | lipoprotein TERM 4098 3465652 - 3465642 - g 75 -3.2 -5.04082 | CAAACAACAATAAAA GTGA ACA CCAC AAGACTGAAGCTGAC Shew185_2887 3465155 - 3465838 + | hypothetical protein TERM 4099 3466280 - 3466256 - T 100 -10.8 -5.56263 | opp_overlap 3466260 AGCAGAAAACAAAAA GCCAGAAAGC ATTCA ACTTTCTGGC TTAAAAATTCAGCAT Shew185_2888 3467699 - 3466347 - | phosphoglucosamine mutase TERM 4100 3467753 - 3467732 - R 79 -5.2 -5.1523 | opp_overlap 3467732 GTCATAAGACAAAAA GCCAAATC GGTGAG GATTTGAC CTTTAAAATAACAAT Shew185_2889 3469294 - 3467870 - | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 4101 3469255 - 3469229 - G 78 -10.8 -3.35088 | AAACTGGGTAACTAA GCCCCTTGCACC ACT GGTGCCAAAGGC AACACCACTTTGTGA Shew185_2890 3470710 - 3469298 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Shew185_2891 3471852 - 3470716 - | glycosyl transferase group 1 Shew185_2892 3472894 - 3471830 - | glycosyl transferase group 1 Shew185_2893 3474074 - 3472875 - | hypothetical protein TERM 4102 3473829 - 3473819 - G 73 -3.2 -4.86216 | ATAAAAAATAACAAA CTGA AAA CCAG ATGATATAGGAAAAA TERM 4103 3474073 - 3474057 - G 100 -4.5 -6.15536 | opp_overlap 3474057 3474060 AAGTAATAAAAAAAA TAAGATA GCA TATCTCA TTATACTTTTGCTCT Shew185_2894 3474931 - 3474074 - | glycosyl transferase family protein Shew185_2895 3475514 - 3474918 - | putative acetyltransferase Shew185_2896 3477131 - 3475683 - | polysaccharide biosynthesis protein TERM 4104 3476624 - 3476603 - G 88 -2.3 -5.83226 | AACTTAAGAAAAAAA GTCCTTTCT CAAC AAAAATGAC AATAAGAAAACCCAG Shew185_2897 3477969 - 3477142 - | NAD-dependent epimerase/dehydratase Shew185_2898 3478527 - 3477970 - | dTDP-4-dehydrorhamnose 3,5-epimerase Shew185_2899 3479409 - 3478546 - | glucose-1-phosphate thymidylyltransferase Shew185_2900 3480577 - 3479501 - | dTDP-glucose 4,6 dehydratase Shew185_2901 3481719 - 3480643 - | sugar transferase TERM 4105 3480679 - 3480689 + g 74 -2.6 -5.03994 | overlap 3480685 AACAACTTTCACTGT TTTT AAT AAAA TTTTTATATCTAACA Shew185_2902 3482733 - 3481759 - | lipopolysaccharide biosynthesis protein TERM 4106 3482279 - 3482291 + g 71 -4.9 -4.52803 | GCTAAATAATCATCT TTATC ATA GATAA TTTTGTCAGTTTCTA Shew185_2903 3485355 - 3482869 - | polysaccharide export protein TERM 4107 3483889 - 3483904 + g 73 -3.2 -4.99435 | TGCATCGCCAAAACG GCTTTG TTCT CTAAGC TTTTTAATTATTGGC Shew185_2904 3486594 - 3486088 - | transcriptional acivator RfaH TERM 4108 3486324 - 3486341 + g 81 -3.3 -5.45652 | overlap 3486327 TGGTATGGATAATTC TGTCGTC AATG GGCGTCA TTTTTTCTTGACAAT TERM 4109 3487176 - 3487188 + G 78 -5.5 -4.87133 | TTATTATGCAATGCG CGCCA TTT TGGTG TTTTATTTAACAGAT Shew185_2905 3487072 - 3488574 + | amino acid/peptide transporter TERM 4110 3488625 - 3488602 - T 100 -14 -5.61881 | opp_overlap 3488602 CTGTAAAAACAAAAA CGCCTTACTA GCAA TAGTAAGGCG TTTTTCGTTGTGTCG TERM 4111 3488602 - 3488625 + T 100 -14 -4.96646 | opp_overlap 3488602 CTGTAAAAACAAAAA CGCCTTACTA GCAA TAGTAAGGCG TTTTTCGTTGTGTCG Shew185_2906 3489787 - 3488684 - | response regulator receiver protein TERM 4112 3488755 - 3488767 + g 75 -7.7 -4.19624 | CCTTAAACTTATTCT CAAGC AAA GCTTG TTTATGTTCAGGCTC Shew185_2907 3490694 - 3489909 - | VacJ family lipoprotein Shew185_2908 3490914 - 3493466 + | hypothetical protein Shew185_2909 3493524 - 3493832 + | FlhB domain-containing protein TERM 4113 3493860 - 3493841 - T 100 -8 -5.54907 | opp_overlap 3493841 GGCATAAAATAAAAA GCTAATTT TGGC AAATTAGC TTTGAGAGTTAAACA Shew185_2910 3494299 - 3493901 - | hypothetical protein TERM 4114 3494060 - 3494077 + g 73 -3.3 -4.88067 | overlap 3494059 CTCTTCAATCCGTTC CGACTGC TGAA GTAGGCG TTTTTCTAACTCAAT TERM 4115 3494510 - 3494486 - R 79 -8.7 -3.97364 | opp_overlap 3494486 3494485, overlap 3494484 CAAATACACAAAATA GCTGAATGA ATTGATA TCATTCAGC CTTATCTCGCTAATT Shew185_2911 3495022 - 3494528 - | putative CheW protein Shew185_2912 3496040 - 3495030 - | putative CheW protein TERM 4116 3496037 - 3496009 - G 82 -5.4 -5.11937 | overlap 3496016 AATAATGCGAAAAAA TCAAAAACAGTT TCATC AACCGATTTTGA CATGGCCAAACTCCC TERM 4117 3496030 - 3496016 - G 76 -2.1 -5.25735 | overlap 3496009 CGAAAAAATCAAAAA CAGTT TCATC AACCG ATTTTGACATGGCCA Shew185_2913 3496815 - 3496024 - | cobyrinic acid ac-diamide synthase Shew185_2914 3497426 - 3496884 - | hypothetical protein TERM 4118 3497371 - 3497360 - G 78 -5.8 -4.67943 | CGCCAAGACACAAAA TGGC AATA GCCA TCAGCAAGATGATGA TERM 4119 3497407 - 3497381 - G 70 -9.5 -3.17527 | opp_overlap 3497379, overlap 3497379 3497382 3497384 TAGCCATCAGCAAGA TGATGAGCACA CTATT TGTGCTCATCG GAGTTTGACTCTTAG TERM 4120 3497406 - 3497382 - G 81 -13 -2.50195 | opp_overlap 3497379, overlap 3497381 3497379 3497384 AGCCATCAGCAAGAT GATGAGCACA CTATT TGTGCTCATC GGAGTTTGACTCTTA Shew185_2915 3498546 - 3497419 - | chemotaxis-specific methylesterase Shew185_2916 3500810 - 3498567 - | CheA signal transduction histidine kinase TERM 4121 3499901 - 3499922 + g 75 -5.9 -4.53685 | gap 1 CAACAGTCGAAGCAG GCGT-TACTG GTG CAGTAGGCGC TTTTACTTCTGCTTT Shew185_2917 3501563 - 3500826 - | chemotaxis phosphatase, CheZ Shew185_2918 3501960 - 3501577 - | response regulator receiver protein Shew185_2919 3502721 - 3502008 - | flagellar biosynthesis sigma factor Shew185_2920 3503595 - 3502714 - | cobyrinic acid ac-diamide synthase TERM 4122 3503503 - 3503487 - G 71 -8.7 -3.78329 | CTGTATTAATGGAAA CGCTGGT TTT ACCAACG CCACCTTTACCACCT Shew185_2921 3504982 - 3503600 - | flagellar biosynthesis regulator FlhF TERM 4123 3504811 - 3504825 + g 82 -5.6 -5.01042 | overlap 3504812 TAAAGGTTGGCGCTG GCGCAG TTG CTGCGG TTTTTGCTTTCGGTT TERM 4124 3504812 - 3504824 + g 71 -9.1 -3.58998 | overlap 3504811 AAAGGTTGGCGCTGG CGCAG TTG CTGCG GTTTTTGCTTTCGGT TERM 4125 3505007 - 3505027 + r 77 -10.5 -3.42346 | overlap 3505012 CTCTACTGGCCGACT GCAGATACG ATA CGTATTTGC TTCTCATCAGGTATT Shew185_2922 3507093 - 3504994 - | flagellar biosynthesis protein FlhA TERM 4126 3505105 - 3505091 - G 73 -5.6 -4.64676 | GTATGTTTAACAAAA CGTGAC AGC GTCGCG CGTAACATACCTGAC Shew185_2923 3508407 - 3507277 - | flagellar biosynthesis protein FlhB TERM 4127 3508020 - 3508010 - G 76 -8.2 -4.09511 | overlap 3508011 AACATGCGCTTAAAA CCCG CTG CGGG GCTCATTTTACTGGC Shew185_2924 3509223 - 3508426 - | flagellar biosynthesis protein FliR TERM 4128 3508854 - 3508843 - G 71 -3 -4.93316 | CAATAACAGGAAAAA GTTA CCAA TAAC CGGCGTTTGCTGACC Shew185_2925 3509497 - 3509228 - | flagellar biosynthetic protein FliQ Shew185_2926 3510262 - 3509516 - | flagellar biosynthesis protein FliP TERM 4129 3510213 - 3510187 - G 80 -9.4 -4.19704 | overlap 3510189 TAACCGCAGGCAAAA CACCGTCGGC AGCCCAG GCCGACGGCA TACATAACAGAATAA TERM 4130 3510211 - 3510189 - G 88 -12 -3.69483 | overlap 3510187 ACCGCAGGCAAAACA CCGTCGGC AGCCCAG GCCGACGG CATACATAACAGAAT Shew185_2927 3510681 - 3510259 - | flagellar biosynthesis protein FliO Shew185_2928 3511092 - 3510712 - | flagellar motor switch protein Shew185_2929 3512132 - 3511104 - | flagellar motor switch protein FliM Shew185_2930 3512699 - 3512172 - | flagellar basal body-associated protein FliL TERM 4131 3512337 - 3512360 + g 83 -6.7 -4.96848 | opp_overlap 3512314 AAAGGTCGTTAACAG CGCATCCTC AATCAG GGGGATGTG TTTTTGTGTCAACAC Shew185_2931 3514941 - 3512788 - | flagellar hook-length control protein Shew185_2932 3515648 - 3515202 - | flagellar export protein FliJ Shew185_2933 3517015 - 3515678 - | flagellum-specific ATP synthase TERM 4132 3516770 - 3516744 - GR 82 -10.8 -3.53012 | GTTTGTTCCCCTAAA GGAACCACCCGG GCA CCGGGTAATACC CCACGTAATTCTTCG Shew185_2934 3518000 - 3516984 - | flagellar assembly protein H Shew185_2935 3519039 - 3517987 - | flagellar motor switch protein G TERM 4133 3518800 - 3518832 + g 80 -4.8 -5.06414 | AGAATACTTTTGTAT GTCATCGAGAAACA GCTTA TGTACCCCGATGAC TTTTTCTTGACCGAA Shew185_2936 3520714 - 3519032 - | flagellar MS-ring protein Shew185_2937 3521095 - 3520760 - | flagellar hook-basal body complex subunit FliE Shew185_2938 3522669 - 3521326 - | two component, sigma54 specific, Fis family transcriptional regulator Shew185_2939 3523744 - 3522662 - | PAS/PAC sensor signal transduction histidine kinase TERM 4134 3523781 - 3523746 - R 95 -15.6 -2.87132 | opp_overlap 3523742 GGGTTGGCTGACATA GTCACTCCGTCAAAAA ATTG CTTATGACGGAGTGAC TGCAGTATCTATGCC Shew185_2940 3525287 - 3523854 - | sigma-54 dependent trancsriptional regulator TERM 4135 3525522 - 3525511 - R 72 -4.4 -4.7657 | overlap 3525503 3525512 TAAAAACGTCAAAAA CTTG ACTT CAAG CCAAAAAAAAGACGC TERM 4136 3525533 - 3525549 + r 100 -8 -5.55664 | opp_overlap 3525533 TCAAGCCAAAAAAAA GACGCA ACCAG TGCGTC TTTTTTTAATCATAA TERM 4137 3525549 - 3525533 - R 100 -8 -5.86332 | opp_overlap 3525533 TCAAGCCAAAAAAAA GACGCA ACCAG TGCGTC TTTTTTTAATCATAA Shew185_2941 3525984 - 3525574 - | flagellar protein FliS Shew185_2942 3526314 - 3525991 - | hypothetical protein Shew185_2943 3527708 - 3526344 - | flagellar hook-associated 2 domain-containing protein TERM 4138 3526812 - 3526828 + g 95 -3.7 -5.90231 | AATCATTGAATCACC CTGCA AAGCCGA TGCAG TTTTTTTATCTTTAT Shew185_2944 3528137 - 3527751 - | flagellar protein FlaG protein Shew185_2945 3529087 - 3528272 - | flagellin domain-containing protein TERM 4139 3529632 - 3529643 + r 73 -5.8 -4.60487 | GCTTGTTTGGCTTAT TCGG CACT CCGA TTTTTGGAACTGATG TERM 4140 3529770 - 3529796 + r 100 -18 -3.39505 | CTCTCCAGTTGCTTG GCGCCAAGGACG ACT CGTCCGTGGCGC TTCTCGGTCTGCCAT TERM 4141 3530299 - 3530275 - R 76 -10.9 -2.57067 | overlap 3530271 TCAACAGGCAAGCTA TTCTCAAACAA TTT TTGCTTGAGAA ACCAATGATGATGGC TERM 4142 3531794 - 3531771 - R 76 -2.4 -5.4505 | opp_overlap 3531771 TTTTGCAATAAAAAA GCACTCTA AACATGAG TCGAGTGC TTCTGTAGACAGATT Shew185_2948 3532649 - 3531834 - | flagellin domain-containing protein TERM 4143 3533897 - 3533874 - R 86 -4.6 -5.4505 | opp_overlap 3533874, overlap 3533875 TTTTTTAATAAAAAA GCACTCAA AGTGTAAA CTGAGTGC TTTTGTAGACTGACT Shew185_2950 3534752 - 3533937 - | flagellin domain-containing protein Shew185_2951 3536047 - 3535229 - | flagellin domain-containing protein Shew185_2952 3537353 - 3536142 - | flagellar hook-associated protein FlgL Shew185_2953 3539290 - 3537365 - | flagellar hook-associated protein FlgK Shew185_2954 3540473 - 3539331 - | peptidoglycan hydrolase TERM 4144 3540368 - 3540390 + g 74 -9.9 -3.48684 | gap 1 TACCTTCAAATTGTT GGGCGACCTT TTTC AAGG-CGCCC TTCTCATCCTTCTGA Shew185_2955 3541582 - 3540491 - | flagellar basal body P-ring protein Shew185_2956 3542268 - 3541594 - | flagellar basal body L-ring protein Shew185_2957 3543068 - 3542280 - | flagellar basal body rod protein FlgG Shew185_2958 3543822 - 3543079 - | flagellar basal body rod protein FlgF TERM 4145 3543981 - 3543948 - R 100 -14.7 -4.2586 | opp_overlap 3543954 TGACAGTAAGATAAA GGCTAAGTGTTGCCA CTGG CGGCAACACTTAGTC AAACAATGTAATGAT TERM 4146 3543954 - 3543975 + r 75 -10.2 -3.14683 | opp_overlap 3543948 TAAGATAAAGGCTAA GTGTTGCC ACTGGC GGCAACAC TTAGTCAAACAATGT Shew185_2959 3545357 - 3543996 - | flagellar hook protein FlgE TERM 4147 3544870 - 3544882 + g 75 -3.4 -5.08601 | opp_overlap 3544870 AGATTCATTTGTAAA CTGA CATTT TCAG TTTTTATTGGGCTAC Shew185_2960 3546209 - 3545439 - | flagellar basal body rod modification protein Shew185_2961 3546650 - 3546234 - | flagellar basal body rod protein FlgC Shew185_2962 3547057 - 3546653 - | flagellar basal body rod protein FlgB TERM 4148 3547156 - 3547185 + r 82 -10.9 -3.53012 | opp_overlap 3547150 3547161, overlap 3547161 AGCAAGTGATGGGTA AAAAATTACCGAC AAAT GTCGGTAATTTTC TTTAAAGCAGCAGAC TERM 4149 3547180 - 3547161 - R 93 -10.8 -5.03314 | opp_overlap 3547156 3547161, overlap 3547150 GTGATGGGTAAAAAA TTACCGAC AAAT GTCGGTAA TTTTCTTTAAAGCAG TERM 4150 3547161 - 3547180 + r 93 -10.8 -4.86731 | opp_overlap 3547150 3547161, overlap 3547156 GTGATGGGTAAAAAA TTACCGAC AAAT GTCGGTAA TTTTCTTTAAAGCAG Shew185_2963 3548040 - 3547201 - | protein-glutamate O-methyltransferase Shew185_2964 3549060 - 3548140 - | putative CheW protein TERM 4151 3548537 - 3548550 + g 70 -2.3 -4.90013 | TGGTAATGCTGGGTT CTGTC GAGG GTCAG TTTTTCATTGGCTTC Shew185_2965 3549266 - 3549973 + | flagellar basal body P-ring biosynthesis protein FlgA Shew185_2966 3550049 - 3550372 + | anti-sigma-28 factor, FlgM TERM 4152 3550476 - 3550453 - g 100 -13.2 -4.89009 | opp_overlap 3550452 3550451 3550446 ATACTCAAGGAAAAA GGCGCTTTGG TTGA CCAAAACGCC GATTTACTGCTTTCT Shew185_2967 3550375 - 3550800 + | FlgN family protein TERM 4153 3550919 - 3550891 - T 89 -6.8 -5.35224 | gap 1 TGCAGAAAAAGAAAA GCCGCATAACTAC TCGC ATAGT-ACGCGGC TCAATAGAGTCATGT Shew185_2968 3551392 - 3550943 - | hypothetical protein Shew185_2969 3552021 - 3551389 - | hypothetical protein Shew185_2970 3552301 - 3553467 + | hypothetical protein TERM 4154 3553571 - 3553545 - f 77 -10.8 -2.92026 | overlap 3553547 TAGCTCAACAGGATA GAGCAGCCGCCT CCT AAGCGGCCGATC GGGGTTCGAGTCCCT TERM 4155 3554725 - 3554711 - g 71 -2.8 -4.89477 | TTCCCAATAATAAAA CCCA TACATGT TGGG CCGATGGCGAACTTA Shew185_2971 3553648 - 3554955 + | hypothetical protein TERM 4156 3554993 - 3555004 + G 77 -4.4 -5.14563 | CATGGATTTACGTGC TGCT GCTA AGCA TTTTTTACTGGCAGA Shew185_2972 3554952 - 3555230 + | hypothetical protein Shew185_2973 3555277 - 3556257 + | NAD-dependent epimerase/dehydratase Shew185_2974 3556274 - 3556951 + | methyltransferase type 11 Shew185_2975 3556953 - 3558128 + | DegT/DnrJ/EryC1/StrS aminotransferase Shew185_2976 3558118 - 3559107 + | hypothetical protein Shew185_2977 3559116 - 3560120 + | N-acylneuraminate-9-phosphate synthase Shew185_2978 3560117 - 3561286 + | UDP-N-acetylglucosamine 2-epimerase TERM 4157 3561604 - 3561616 + G 71 -6.3 -4.26475 | overlap 3561608 AGGATGGGCACACTG TCATC ATC GATGA TGTTTTTTATCCGAT TERM 4158 3561608 - 3561618 + G 85 -5.4 -5.26316 | overlap 3561604 TGGGCACACTGTCAT CATC GAT GATG TTTTTTATCCGATAC Shew185_2979 3561267 - 3562292 + | hypothetical protein Shew185_2980 3564769 - 3562289 - | TPR repeat-containing protein Shew185_2981 3565494 - 3564799 - | N-acylneuraminate cytidylyltransferase Shew185_2982 3566550 - 3565498 - | nucleotidyl transferase TERM 4159 3566268 - 3566280 + g 80 -6.3 -4.75372 | overlap 3566255 TATCAAGGATAGGTA TCGAT GTG ATCGA TTTTTGATCCATGAT Shew185_2983 3566787 - 3567263 + | hypothetical protein TERM 4160 3567356 - 3567387 + F 75 -9.6 -3.40843 | overlap 3567355 GATGAGTCATCTTGT TGGCATGCTCAT ACTTAATG ATGAGTATGCCA TATTTAACCATTTTC TERM 4161 3568027 - 3568011 - g 74 -4.3 -4.83615 | overlap 3568025 GACGGCCTATAAAAA TGGCCAG GAA CAAGCCA CCATCGAAGGTGAAA TERM 4162 3568109 - 3568097 - g 83 -9.1 -4.40358 | AGCCAGCCCAGAAAA GCCTC AAA GAGGC CATGCTGGGTAAATA Shew185_2984 3567565 - 3568125 + | hypothetical protein TERM 4163 3568190 - 3568145 - T 72 -10.5 -2.62157 | opp_overlap 3568162 3568183, overlap 3568144 3568162 TATTAACGTTAGAAT TTGAATTCGATATCCAAGGCG GCAG CGCCTTGGCTATCCATATCAA GCGCAGCTTGGTCGG Shew185_2985 3569082 - 3568138 - | hypothetical protein Shew185_2986 3569856 - 3569206 - | TetR family transcriptional regulator TERM 4164 3569357 - 3569339 - G 76 -7.4 -4.39414 | overlap 3569343 AACATTAAACATAAA CGCACC GCACTAT GGTGCG CATTACCGAAGCGAT TERM 4165 3569928 - 3569885 - H 91 -10.5 -4.55491 | opp_overlap 3569887 3569889 3569912, overlap 3569912 TAGTTAAGCACAAAA TAGACTAGACAGTCTAGTT CCGCAC AACTAGACTAGCAAGTCTA GTTACATAGCATTAA TERM 4166 3569929 - 3569912 - H 70 -8.5 -3.29511 | opp_overlap 3569889 3569887 3569912, overlap 3569885 TCTAGTTCCGCACAA CTAGACT AGCA AGTCTAG TTACATAGCATTAAC Shew185_2987 3569972 - 3571078 + | RND family efflux transporter MFP subunit TERM 4167 3571850 - 3571827 - g 74 -9.6 -3.52515 | opp_overlap 3571824 ACTCAAAATTGATAA CCAAGGCCAA ATTA TTCGCCTTGG AGATATTGCCACTAT Shew185_2988 3571081 - 3574149 + | acriflavin resistance protein Shew185_2989 3574391 - 3574146 - | hypothetical protein TERM 4168 3574221 - 3574241 + g 79 -9.7 -3.93288 | opp_overlap 3574221, overlap 3574235 3574236 TTTTAACGCTAAAAA GTGCTCATC GGC GGTGGGCAC TTTAGTTAACTCCAG TERM 4169 3574241 - 3574221 - G 75 -5.3 -4.66833 | opp_overlap 3574221 3574235 3574236 TTTTAACGCTAAAAA GTGCTCATC GGC GGTGGGCAC TTTAGTTAACTCCAG TERM 4170 3574933 - 3574919 - g 77 -4.2 -5.04868 | GTAAACCAAATAAAA CCGTCA ATG TGATGG GAGTCAGCTCCCCCG TERM 4171 3576444 - 3576413 - g 82 -11.6 -3.35371 | CACAGGGCGAATCAA CCGGCGAGCAACTT AAGG AAATCACCCGCCGG ATTGGTGAACTCGCC Shew185_2990 3574651 - 3576654 + | methyl-accepting chemotaxis sensory transducer TERM 4172 3576740 - 3576720 - T 100 -15.5 -4.431 | opp_overlap 3576720 GAGTTATGTATAAAA TGCCACCCA CAC TGGGTGGCA TTTTTTATGGGAGCA TERM 4173 3576720 - 3576740 + T 100 -15.5 -5.24129 | opp_overlap 3576720 GAGTTATGTATAAAA TGCCACCCA CAC TGGGTGGCA TTTTTTATGGGAGCA TERM 4174 3576880 - 3576895 + T 83 -6 -5.09225 | opp_overlap 3576880 AATCCCAATAAAAAA CCCCGC TAGT GCGAGG TTTTTTAAATCGAGT TERM 4175 3576895 - 3576880 - T 93 -8.2 -5.4756 | opp_overlap 3576880 AATCCCAATAAAAAA CCCCGC TAGT GCGAGG TTTTTTAAATCGAGT Shew185_2991 3577034 - 3576918 - | cyd operon protein YbgT Shew185_2992 3578193 - 3577054 - | cytochrome d ubiquinol oxidase, subunit II Shew185_2993 3579765 - 3578209 - | cytochrome bd ubiquinol oxidase subunit I TERM 4176 3580325 - 3580309 - R 80 -2.3 -5.66868 | opp_overlap 3580321, overlap 3580300 AATTAACTAAAAAAA CTTAAAA ATA TTTTTAG CGTAAATCAATTTAA TERM 4177 3580744 - 3580712 - R 91 -11.9 -4.13767 | opp_overlap 3580715, overlap 3580715 TTTGTTAGCGCAAAA CGAGCCCCCCCTCTC CTT GAGAGTGGGGGCTTT TTCTATTCTAAAGCC TERM 4178 3580741 - 3580715 - R 100 -18 -3.09831 | opp_overlap 3580715, overlap 3580712 GTTAGCGCAAAACGA GCCCCCCCTCTC CTT GAGAGTGGGGGC TTTTTCTATTCTAAA TERM 4179 3580715 - 3580741 + r 100 -18 -5.1523 | opp_overlap 3580712 3580715 GTTAGCGCAAAACGA GCCCCCCCTCTC CTT GAGAGTGGGGGC TTTTTCTATTCTAAA TERM 4180 3580953 - 3580971 + r 93 -10.3 -5.09426 | opp_overlap 3580953 TAAAATATAAAAAAA GGAGCGA AATTA TCGCTCC TTTTTTACGATTAAC TERM 4181 3580971 - 3580953 - R 100 -10.3 -5.9362 | opp_overlap 3580953 TAAAATATAAAAAAA GGAGCGA AATTA TCGCTCC TTTTTTACGATTAAC Shew185_2994 3584919 - 3581038 - | phosphoribosylformylglycinamidine synthase TERM 4182 3581460 - 3581435 - G 71 -7.5 -4.0896 | overlap 3581424 3581425 AAACGCGCTTCAAAA CGCTCTGAGCG GTTA CGCACAAAACG TGGCCAATGCTCGCT TERM 4183 3583919 - 3583943 + g 75 -11.5 -2.71712 | opp_overlap 3583924, overlap 3583918 3583924 TTTAAATTTGATACG CTAAAGCCTGT TAA ACCGGCTTTAG GTTTAGAACCACGAC TERM 4184 3584348 - 3584363 + g 70 -7.6 -3.93038 | opp_overlap 3584340 AAACGGACGAAGTTT TCGACT AAAT AGTCGA TTTCATCTTCGGCTA TERM 4185 3585305 - 3585293 - g 77 -4.9 -5.00616 | TTCGTGCCGAAAAAA TTAAC TGA GTTAA GAGTCGGCACACTCT TERM 4186 3586197 - 3586185 - g 71 -4.1 -4.67048 | CTACGGCAAAAGAAA TTGGC ATC ACCAA CCGTTTGGATGCGGA TERM 4187 3586468 - 3586443 - g 76 -2.4 -5.19212 | overlap 3586444 AGTACTATCAAAAAA CCCGCTACGG CTATGC CCGTGGCAGT GAAGCCGTCCATTAC Shew185_2995 3585200 - 3586630 + | lytic transglycosylase catalytic TERM 4188 3586740 - 3586687 - T 100 -17.7 -3.73813 | opp_overlap 3586699 3586700, overlap 3586682 CAATGATGAATAGAA CCAGCTTCTAGATCTAAGCTCAGTG ATCT CAGTGAGCTTAGGTTTAGAAGCTAG AGCTAGAGTCAAAAC TERM 4189 3586699 - 3586728 + T 79 -10.1 -3.55444 | opp_overlap 3586682 3586687, overlap 3586700 GAACCAGCTTCTAGA TCTAAGCTCAGTG ATCT CAGTGAGCTTAGG TTTAGAAGCTAGAGC TERM 4190 3586700 - 3586727 + T 79 -11.4 -2.73124 | opp_overlap 3586682 3586687, overlap 3586699 AACCAGCTTCTAGAT CTAAGCTCAGTG ATCT CAGTGAGCTTAG GTTTAGAAGCTAGAG Shew185_2996 3587600 - 3587076 - | CMP/dCMP deaminase zinc-binding TERM 4191 3587104 - 3587117 + g 93 -3.1 -5.92337 | gap 1, overlap 3587104 3587105 TGCTGCGCCTTTTGA G-CCTG TTT CAGGGC TTTTTTTTCCTCTCT TERM 4192 3587654 - 3587640 - R 75 -2.7 -5.2204 | opp_overlap 3587640 GATAACCAATAAAAA GGCGC ACTAG GCTCC TTTCACTGAATAAGG Shew185_2997 3591601 - 3587756 - | hypothetical protein TERM 4193 3589464 - 3589454 - G 73 -8.2 -3.89881 | AGCAACGTCGATAAA GGCG CTA CGCC ACTGCACAAGCTGAT TERM 4194 3591349 - 3591359 + g 73 -5.4 -4.62069 | overlap 3591341 TGATCGCAGCCATCG GCAT TGA ATGC TTTTTGGCCTGAAGA TERM 4195 3591926 - 3591903 - R 100 -11.1 -5.46657 | TACCCCAATAAAAAA TGCCAGTCA ATAAAA TGACTGGCA TTGAGATAAACCATA Shew185_2998 3593550 - 3591973 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 4196 3592550 - 3592575 + g 83 -4.8 -5.2166 | GGATAAATCGTGCCT TGCGCTAA CCATTTGGCA TTAGCGCA TTTTTTCGATTCTTC TERM 4197 3593658 - 3593636 - R 91 -11.9 -3.87373 | opp_overlap 3593636 3593637, overlap 3593637 CACACGCTTTACAAA GGGGGCGGC CTATC GCCGCCCCT CTTATCAAACGATTA TERM 4198 3593636 - 3593659 + r 86 -11.7 -3.30159 | gap 1, opp_overlap 3593636 3593637, overlap 3593637 CACACGCTTTACAAA G-GGGGCGGC CTATC GCCGCCCCTC TTATCAAACGATTAA TERM 4199 3593657 - 3593637 - R 95 -15.4 -2.92102 | opp_overlap 3593636 3593637, overlap 3593636 ACACGCTTTACAAAG GGGGCGGC CTATC GCCGCCCC TCTTATCAAACGATT TERM 4200 3593637 - 3593657 + r 100 -15.4 -3.21772 | opp_overlap 3593637 3593636, overlap 3593636 ACACGCTTTACAAAG GGGGCGGC CTATC GCCGCCCC TCTTATCAAACGATT Shew185_2999 3595137 - 3593671 - | inositol-5-monophosphate dehydrogenase Shew185_3000 3595258 - 3596604 + | exodeoxyribonuclease VII large subunit TERM 4201 3596663 - 3596634 - T 100 -12.3 -4.15543 | opp_overlap 3596636 3596641 3596656, overlap 3596636 3596641 GAAATAGTCTTAAAA CACAAAAGGAACC CTAA GGTTCCTTTTGTT TCAAATGTGTCTAGT TERM 4202 3596636 - 3596661 + T 100 -14.9 -3.66139 | opp_overlap 3596636 3596634 3596641, overlap 3596641 3596656 AATAGTCTTAAAACA CAAAAGGAACC CTAA GGTTCCTTTTG TTTCAAATGTGTCTA TERM 4203 3596661 - 3596636 - T 100 -14.9 -3.66658 | opp_overlap 3596636 3596641 3596656, overlap 3596634 3596641 AATAGTCTTAAAACA CAAAAGGAACC CTAA GGTTCCTTTTG TTTCAAATGTGTCTA TERM 4204 3596641 - 3596656 + T 90 -9 -4.89521 | opp_overlap 3596636 3596634 3596641, overlap 3596636 TCTTAAAACACAAAA GGAACC CTAA GGTTCC TTTTGTTTCAAATGT TERM 4205 3596656 - 3596641 - T 90 -9 -4.89567 | opp_overlap 3596641 3596636, overlap 3596636 3596634 TCTTAAAACACAAAA GGAACC CTAA GGTTCC TTTTGTTTCAAATGT Shew185_3001 3598153 - 3596687 - | GTP-binding protein EngA TERM 4206 3597527 - 3597504 - G 70 -9.6 -3.24924 | opp_overlap 3597495, overlap 3597502 TCTTCACCTAGAATA CGGTTAGTCA GGGT TGACTTACCG ACGTTAGGTTTACCG TERM 4207 3597808 - 3597819 + g 85 -5.8 -5.02074 | CAACTTTGTTCGCAA CCAC GAAA GTGG TTTTTTCACGGCTAC TERM 4208 3598186 - 3598172 - R 70 -3.6 -5.00616 | TTTGCCTCTAAAAAA CTTTTC AAT AAAAAG CCCCCGGAACACACT TERM 4209 3598210 - 3598186 - R 100 -13.6 -5.06816 | ACTTTTCAATAAAAA GCCCCCGGAA CACAC TTCCAGGGGC TCTACAAGGATAACA Shew185_3002 3599420 - 3598233 - | outer membrane protein assembly complex subunit YfgL Shew185_3003 3600052 - 3599432 - | hypothetical protein TERM 4210 3599503 - 3599517 + g 80 -8.6 -4.39571 | opp_overlap 3599487 CACCATTGTCCATGG CAGCTT GAT AAGCTG TTTTCGCTTTCTCAA Shew185_3004 3601357 - 3600077 - | histidyl-tRNA synthetase TERM 4211 3601444 - 3601434 - R 76 -6.8 -4.43272 | opp_overlap 3601434 3601433, overlap 3601435 ACGTAAAACGTAAAA CGAC CCC GTCG GTTTCGGGGCCTAGC Shew185_3005 3602618 - 3601503 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 4212 3602448 - 3602459 + g 78 -5.8 -4.82901 | TGAGACACGTACTAT GTCG GCAC CGAC TTTTTCTAAGGCACG Shew185_3006 3603737 - 3602667 - | hypothetical protein TERM 4213 3602796 - 3602784 - G 74 -9.1 -3.75845 | opp_overlap 3602783 TAAAATAATTTTAAA CGGTG GCA CACCG CTCACTTGCACTGCA Shew185_3007 3604522 - 3603734 - | type IV pilus biogenesis/stability protein PilW Shew185_3008 3605676 - 3604555 - | hypothetical protein TERM 4214 3604592 - 3604608 + g 70 -2.3 -4.84311 | TGGTTTTCTTGCATG CGTTT TTTTGCT AAACG TTTTGTTCTATCGCG TERM 4215 3605249 - 3605239 - G 73 -3.2 -4.88222 | AGCAAAACCTAAAAA GTGC GAT ACAC GCCAAATTTGGCCGA TERM 4216 3605436 - 3605451 + g 71 -4.6 -4.58395 | opp_overlap 3605436 TGATCGCGAATTTAA TCGTCC CATC GGTCGA TTTTTGGAAGCTCGA Shew185_3009 3605827 - 3606918 + | hypothetical protein TERM 4217 3606970 - 3606948 - f 100 -15 -3.01924 | opp_overlap 3606948 3606952, overlap 3606952 TAGTGCTTGTTAATA TAAAGGGAGC CTA GCTCCCTTTA TTCTTTTAGAATGCA TERM 4218 3606948 - 3606970 + F 100 -15 -4.19746 | opp_overlap 3606948 3606952, overlap 3606952 TAGTGCTTGTTAATA TAAAGGGAGC CTA GCTCCCTTTA TTCTTTTAGAATGCA TERM 4219 3606966 - 3606952 - f 93 -11.4 -4.1891 | opp_overlap 3606952 3606948, overlap 3606948 GCTTGTTAATATAAA GGGAGC CTA GCTCCC TTTATTCTTTTAGAA TERM 4220 3606952 - 3606966 + F 95 -11.4 -4.67697 | opp_overlap 3606948 3606952, overlap 3606948 GCTTGTTAATATAAA GGGAGC CTA GCTCCC TTTATTCTTTTAGAA TERM 4221 3608521 - 3608540 + G 81 -7.8 -4.50159 | gap 1 TATTACTACGATGGC CGC-CGTCC ACT GGGCGAGCG TTTATTTAGATTGGA TERM 4222 3608708 - 3608718 + G 71 -6.8 -4.29073 | TGGAATCTCTGACAT TGCC ACA GGCA TTTATTCGATTCTTA Shew185_3010 3607063 - 3608808 + | 5'-nucleotidase domain-containing protein Shew185_3011 3609787 - 3608894 - | LysR family transcriptional regulator TERM 4223 3610285 - 3610314 + G 77 -3.8 -5.08824 | gap 1 CTCGCCCAACCGCCC TCG-TATTGTCAT TCACT ATGATAATAGCGA TTTTTTCAGTACACA Shew185_3012 3610020 - 3610463 + | DoxX family protein Shew185_3013 3610476 - 3611186 + | pirin domain-containing protein TERM 4224 3611316 - 3611342 + T 100 -10.3 -5.4756 | gap 1 GCACTCACCTAGCAG CACTGCCACAAG TCAT CTT-TGGCAGTG TTTTTTATTGGCGTT Shew185_3014 3611968 - 3611444 - | GCN5-related N-acetyltransferase Shew185_3015 3612645 - 3612136 - | GCN5-related N-acetyltransferase TERM 4225 3612755 - 3612777 + r 70 -9.1 -3.17075 | opp_overlap 3612755 GGCTAAAAACAAAAA CGGCCTCGA AGGTA TCGAAGCCG TTGGATTAAAGAGGC TERM 4226 3612777 - 3612755 - R 100 -11.3 -5.61881 | opp_overlap 3612755 GGCTAAAAACAAAAA CGGCCTCGA AGGTA TCGAAGCCG TTGGATTAAAGAGGC Shew185_3016 3613120 - 3612818 - | NrfJ-related protein Shew185_3017 3613456 - 3613247 - | hypothetical protein Shew185_3018 3614087 - 3613617 - | GCN5-related N-acetyltransferase Shew185_3019 3614616 - 3615458 + | hypothetical protein Shew185_3020 3615418 - 3615885 + | CopG family transcriptional regulator TERM 4227 3615910 - 3615941 + F 89 -6.6 -5.26875 | gap 1, overlap 3615911 ATACTCCCACCCTTT TCCGGTAACTC-AGC TAA GCTCGGGTTATCGGC TTTTTTACTTAAGAA TERM 4228 3615911 - 3615940 + F 80 -10.1 -3.75402 | gap 1, overlap 3615910 TACTCCCACCCTTTT CCGGTAACTC-AGC TAA GCTCGGGTTATCGG CTTTTTTACTTAAGA TERM 4229 3615991 - 3615975 - f 79 -5.1 -5.1244 | GCACCAAGATAAAAA CCACAAT AAA ATCGCGG CATAAGTTCTGATCC TERM 4230 3616671 - 3616655 - g 75 -5.1 -4.72272 | TCGCGCCAGCAAAAA CCTTAAC CGA GTTACGG GATCAAGCCCAGTTC Shew185_3021 3616075 - 3617538 + | extracellular solute-binding protein TERM 4231 3617725 - 3617713 - g 75 -3.4 -5.055 | GCAACTGGCAAAAAA CAGT GAAAA ACTG CAAATCATCACAGCG TERM 4232 3618321 - 3618308 - g 70 -2.3 -4.88918 | TTATCGCAAATAAAA CAGAC CATG GTCGG TGAAGATAACCTGTT Shew185_3022 3617525 - 3619264 + | diguanylate cyclase Shew185_3023 3619376 - 3620200 + | hypothetical protein Shew185_3024 3620225 - 3620857 + | hypothetical protein Shew185_3025 3622477 - 3621002 - | putative signal transduction protein TERM 4233 3621394 - 3621382 - G 73 -3.3 -4.95547 | GCGATAACAACAAAA CACCG CAG CGGTC AACACCCACGCCCTC TERM 4234 3621904 - 3621888 - G 87 -6.5 -5.03314 | GTGAGCTGCAAAAAA GAAGCAC CAA GGGCTTC GCGGGTAGCACTTCT TERM 4235 3622621 - 3622642 + r 88 -11.6 -3.66666 | opp_overlap 3622621 ACCCGCAAATAAAAA TGCCCGAG GCAAAG CTCGGGCA TTTAGAGGTTTTAAA TERM 4236 3622642 - 3622621 - R 100 -11.6 -5.27938 | opp_overlap 3622621 ACCCGCAAATAAAAA TGCCCGAG GCAAAG CTCGGGCA TTTAGAGGTTTTAAA Shew185_3026 3623682 - 3622669 - | threonine aldolase Shew185_3027 3624027 - 3624617 + | OmpA/MotB domain-containing protein TERM 4237 3625411 - 3625399 - g 87 -6.3 -5.01811 | TGAGCAAATCAAAAA TGCAT TAG ATGCA GCCGATATCGGTATT Shew185_3028 3624650 - 3625477 + | MscS mechanosensitive ion channel TERM 4238 3625513 - 3625496 - f 82 -8.3 -4.30833 | opp_overlap 3625496 TAAATGAGTAACAAA GGTCGGC AATT GCCGGCC TTTTTTTATGGTTCC TERM 4239 3625496 - 3625513 + F 100 -10.5 -5.71983 | opp_overlap 3625496 TAAATGAGTAACAAA GGTCGGC AATT GCCGGCC TTTTTTTATGGTTCC Shew185_3029 3625601 - 3626194 + | redoxin domain-containing protein TERM 4240 3626231 - 3626210 - T 93 -10.1 -5.03314 | opp_overlap 3626212, overlap 3626212 TTTACCGCTAAAAAA CAGGGCAGC CTTA GCTGCCCTT TTGTTTTACGATTGT TERM 4241 3626229 - 3626212 - T 100 -12.7 -4.14633 | opp_overlap 3626212, overlap 3626210 TACCGCTAAAAAACA GGGCAGC CTTA GCTGCCC TTTTGTTTTACGATT TERM 4242 3626212 - 3626229 + T 100 -12.7 -5.10163 | opp_overlap 3626212 3626210 TACCGCTAAAAAACA GGGCAGC CTTA GCTGCCC TTTTGTTTTACGATT Shew185_3030 3626912 - 3626271 - | hypothetical protein TERM 4243 3627227 - 3627250 + r 85 -6.6 -5.07486 | opp_overlap 3627231, overlap 3627231 AAAAATCAGCCATAA AAAAGCGGCC CTCA GGCCGCTTAA TTTTTATTCAAACTG TERM 4244 3627246 - 3627231 - R 100 -11.8 -5.28778 | opp_overlap 3627227 3627231 ATCAGCCATAAAAAA GCGGCC CTCA GGCCGC TTAATTTTTATTCAA TERM 4245 3627231 - 3627246 + r 91 -11.8 -3.9407 | opp_overlap 3627231, overlap 3627227 ATCAGCCATAAAAAA GCGGCC CTCA GGCCGC TTAATTTTTATTCAA Shew185_3031 3627834 - 3627274 - | hypothetical protein TERM 4246 3628039 - 3628053 + G 100 -6.4 -5.63103 | TTATTAGCGCGTTTT TGGTTG CAT CAGCCA TTTTTTTCCTTGCGC Shew185_3032 3628014 - 3628331 + | hypothetical protein TERM 4247 3628400 - 3628428 + F 100 -14.7 -5.47218 | opp_overlap 3628405 TTAGCATTTTGTTCA GACCACTTAAGGA TAA TCCTCAAGTGGTC TTTTTTTACCTCCCA Shew185_3033 3628501 - 3628839 + | translation initiation factor Sui1 Shew185_3034 3628867 - 3629469 + | hypothetical protein Shew185_3035 3629499 - 3629924 + | Holliday junction resolvase-like protein TERM 4248 3629953 - 3629982 + T 78 -10.9 -2.99837 | opp_overlap 3629954 3629959, overlap 3629959 AAAACCACAGAAAAA AGAAAAGGATAAG TTGC CTTATCCTTTTCA GTTTGATGTTTAACC TERM 4249 3629981 - 3629954 - T 100 -14.4 -5.43487 | opp_overlap 3629953 3629959, overlap 3629959 AAACCACAGAAAAAA GAAAAGGATAAG TTGC CTTATCCTTTTC AGTTTGATGTTTAAC TERM 4250 3629959 - 3629976 + T 85 -8.5 -4.38313 | opp_overlap 3629954 3629959, overlap 3629953 ACAGAAAAAAGAAAA GGATAAG TTGC CTTATCC TTTTCAGTTTGATGT TERM 4251 3629976 - 3629959 - T 95 -8.5 -5.51612 | opp_overlap 3629959 3629953, overlap 3629954 ACAGAAAAAAGAAAA GGATAAG TTGC CTTATCC TTTTCAGTTTGATGT Shew185_3036 3631026 - 3630013 - | ferrochelatase Shew185_3037 3631751 - 3631059 - | glutathione peroxidase TERM 4252 3631761 - 3631743 - G 90 -8.1 -5.16841 | CGACACCAACAAAAA GCAGCCC ATAAA GAGCTGC TTAACCTAGAACCTG Shew185_3038 3632898 - 3631786 - | twitching motility protein Shew185_3039 3633945 - 3632908 - | twitching motility protein TERM 4253 3634640 - 3634650 + G 80 -6.8 -4.72272 | AACTATGGTGCGTAT TGGC AGT GCCA TTTTTGGTGAGCGCA Shew185_3040 3633981 - 3634679 + | alanine racemase domain-containing protein Shew185_3041 3634895 - 3635713 + | pyrroline-5-carboxylate reductase TERM 4254 3636086 - 3636074 - g 75 -3.3 -5.14563 | opp_overlap 3636072 3636074 TCTGTGATCAAAAAA GCAGG GGT CTTGC TGTTTTGGATGCTGT Shew185_3042 3635762 - 3636310 + | protein of unknown function YGGT TERM 4255 3636362 - 3636311 - g 72 -10.2 -3.05384 | opp_overlap 3636319 3636327 TGGGCTGTGATCTAA TGAGTGCAGTGACTTTGCAGCAAG GTGA CTTGCTGCTTAATCTCTACATTCA GCCTAAGGCCAGCCG TERM 4256 3636327 - 3636346 + G 85 -12.2 -3.33708 | opp_overlap 3636311, overlap 3636319 GAGTGCAGTGACTTT GCAGCAAG GTGA CTTGCTGC TTAATCTCTACATTC Shew185_3043 3636310 - 3636609 + | hypothetical protein Shew185_3044 3636741 - 3637175 + | hypothetical protein Shew185_3045 3637315 - 3637932 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Shew185_3046 3637932 - 3639098 + | putative oxygen-independent coproporphyrinogen III oxidase TERM 4257 3639128 - 3639174 + F 70 -5.5 -4.43189 | gap 1 TAGCTATATAAATAA TGTGTTAGTGGTCAATAGTG CAGTTTAA TACTATT-ACTGCTAACACA TTTTCTAACATTAAT Shew185_3047 3639251 - 3641101 + | hypothetical protein TERM 4258 3641237 - 3641193 - T 90 -13.2 -2.54387 | gap 1, opp_overlap 3641200 3641207, overlap 3641207 GAAAGTCTTAAGCTA CGC-CCAATAAAAAAGCCACT CGAA AGTGGCTTTTTTATTGGTACC ATTATCCCGTTAGAT TERM 4259 3641200 - 3641229 + T 100 -15.3 -3.19653 | opp_overlap 3641193 3641207, overlap 3641207 TTAAGCTACGCCCAA TAAAAAAGCCACT CGAA AGTGGCTTTTTTA TTGGTACCATTATCC TERM 4260 3641207 - 3641222 + T 95 -9 -5.5112 | opp_overlap 3641193 3641207, overlap 3641200 ACGCCCAATAAAAAA GCCACT CGAA AGTGGC TTTTTTATTGGTACC TERM 4261 3641222 - 3641207 - T 95 -9 -5.45652 | opp_overlap 3641207 3641200, overlap 3641193 ACGCCCAATAAAAAA GCCACT CGAA AGTGGC TTTTTTATTGGTACC TERM 4262 3641428 - 3641403 - T 100 -12 -5.52023 | ACCATCAATAAAAAA TTACCTCAGC GATAAG GCTGAGGTAA ACCAAAAACTAGGAT TERM 4263 3641650 - 3641637 - T 76 -3.1 -5.26316 | GGATGTTATAAAAAA GTGCT TTAG AACAC CCTAAAAAATCATCA Shew185_3048 3642716 - 3641775 - | LysR family transcriptional regulator TERM 4264 3643065 - 3643038 - R 100 -9.8 -5.4833 | TTAGCCAATAAAAAA GCCCCTAGGCGA TAAA TTGACTAGGGGC GTAGCATTCAAATTT Shew185_3049 3643987 - 3643166 - | hypothetical protein TERM 4265 3644113 - 3644131 + r 74 -6 -4.37502 | overlap 3644114 3644127 TAGCACTAAAAGGTC ATTAGCGA AAT TCGCTAAC TTTTAGTCTGATAGT TERM 4266 3644114 - 3644130 + r 73 -9.5 -3.21778 | overlap 3644113 3644127 AGCACTAAAAGGTCA TTAGCGA AAT TCGCTAA CTTTTAGTCTGATAG Shew185_3050 3645084 - 3644170 - | glutaminase Shew185_3051 3645410 - 3645084 - | hypothetical protein Shew185_3052 3646180 - 3645464 - | tRNA (guanine-N(7))-methyltransferase TERM 4267 3647084 - 3647062 - g 80 -2.6 -5.48303 | opp_overlap 3647062 AGAAGCCTAAAAAAA CCATACCG ACCAAAG CGGCGTGG ATGTTAGTGCTAATG TERM 4268 3647369 - 3647357 - g 73 -4.8 -4.67982 | TGTCATGGAACAAAA CCAG TCTCT CTGG TATAACATAAGTCAT Shew185_3053 3646380 - 3647471 + | A/G-specific adenine glycosylase Shew185_3054 3647474 - 3647752 + | hypothetical protein TERM 4269 3647784 - 3647809 + T 89 -10.5 -4.30177 | opp_overlap 3647790, overlap 3647790 AACGATAAAGCCCAC AAAAAAGCGCC TTTC GGCGCTTTTTG TTTATTCATCTCGTG TERM 4270 3647803 - 3647790 - T 100 -9.5 -5.28826 | opp_overlap 3647784 3647790 AAAGCCCACAAAAAA GCGCC TTTC GGCGC TTTTTGTTTATTCAT TERM 4271 3647790 - 3647803 + T 100 -9.5 -5.48514 | opp_overlap 3647790, overlap 3647784 AAAGCCCACAAAAAA GCGCC TTTC GGCGC TTTTTGTTTATTCAT Shew185_3055 3648415 - 3647840 - | hypothetical protein Shew185_3056 3648971 - 3648420 - | cytochrome B561 TERM 4272 3649403 - 3649387 - R 70 -9.5 -2.62616 | opp_overlap 3649389, overlap 3649389 TCAGTCGGTAGAGCA GAGGATT GAA AATCCTC GTGTCCCTGGTTCGA TERM 4273 3649570 - 3649540 - R 90 -11.2 -4.08706 | opp_overlap 3649540 3649547, overlap 3649543 3649547 CCGGCACCATATAAA CAACGAAGCCACTC AAT GAGTGGCTTTTTTG TATTTGAAATTTGAA TERM 4274 3649540 - 3649570 + r 93 -13.4 -3.43919 | opp_overlap 3649540 3649543 3649547, overlap 3649547 CCGGCACCATATAAA CAACGAAGCCACTC AAT GAGTGGCTTTTTTG TATTTGAAATTTGAA TERM 4275 3649567 - 3649543 - R 76 -7.1 -4.16814 | opp_overlap 3649540 3649547, overlap 3649540 3649547 GCACCATATAAACAA CGAAGCCACTC AAT GAGTGGCTTTT TTGTATTTGAAATTT TERM 4276 3649547 - 3649563 + r 100 -12.3 -5.56264 | opp_overlap 3649543 3649540 3649547, overlap 3649540 CATATAAACAACGAA GCCACTC AAT GAGTGGC TTTTTTGTATTTGAA TERM 4277 3649563 - 3649547 - R 90 -12.3 -3.67305 | opp_overlap 3649547 3649540, overlap 3649543 3649540 CATATAAACAACGAA GCCACTC AAT GAGTGGC TTTTTTGTATTTGAA TERM 4278 3649786 - 3649796 + r 70 -2.6 -5.09762 | CATACATTGCATGCC TTAA GCG TTAA TTTTCTTTCTTAAAA TERM 4279 3649981 - 3649967 - R 75 -5.7 -4.67353 | TCAGTCATTTAAAAA TGGCT TGCAC AGCCA AAGCGAGCACTATAT TERM 4280 3650110 - 3650094 - R 70 -9.5 -2.62616 | opp_overlap 3650096, overlap 3650096 TCAGTCGGTAGAGCA GAGGATT GAA AATCCTC GTGTCCCTGGTTCGA TERM 4281 3650241 - 3650255 + r 100 -10 -5.76633 | opp_overlap 3650240 3650233 3650241 ATATAAACAACGAAG CCACTC AAT GAGTGG TTTTTTTGTATCTAA TERM 4282 3650255 - 3650241 - R 73 -10 -2.79299 | opp_overlap 3650241, overlap 3650240 3650233 ATATAAACAACGAAG CCACTC AAT GAGTGG TTTTTTTGTATCTAA TERM 4283 3650364 - 3650394 + r 100 -21.4 -2.91239 | opp_overlap 3650364 3650367, overlap 3650367 CCGGCACCATATAAA CAATGAAGCCACTC AAT GAGTGGCTTCATTG TCTCTGAAATCTGTA TERM 4284 3650394 - 3650364 - R 100 -21.4 -4.08706 | opp_overlap 3650364 3650367, overlap 3650367 CCGGCACCATATAAA CAATGAAGCCACTC AAT GAGTGGCTTCATTG TCTCTGAAATCTGTA TERM 4285 3650391 - 3650367 - R 100 -17.3 -4.16814 | opp_overlap 3650364 3650367, overlap 3650364 GCACCATATAAACAA TGAAGCCACTC AAT GAGTGGCTTCA TTGTCTCTGAAATCT TERM 4286 3650367 - 3650391 + r 100 -17.3 -3.59966 | opp_overlap 3650367 3650364, overlap 3650364 GCACCATATAAACAA TGAAGCCACTC AAT GAGTGGCTTCA TTGTCTCTGAAATCT TERM 4287 3650565 - 3650549 - R 100 -8.7 -5.60993 | opp_overlap 3650549 CGCCGCATAAAAAAA GCCACTC ATT GAGTGAC TTTGGGCTCTTATAC Shew185_3057 3650792 - 3650607 - | hypothetical protein Shew185_3058 3650946 - 3651290 + | hypothetical protein TERM 4288 3651358 - 3651313 - T 100 -15.8 -3.14132 | opp_overlap 3651321, overlap 3651327 CCTTTCCCCTAGCAA CCTCAATACTTAAACCTCAA TGCTTG TTGAAGGTTAAGTATTGAGG TTGCAGCGAGTCCCT Shew185_3059 3651616 - 3651386 - | hypothetical protein Shew185_3060 3652463 - 3651918 - | hypothetical protein Shew185_3061 3653065 - 3652451 - | hypothetical protein Shew185_3062 3653732 - 3653151 - | hypothetical protein TERM 4289 3653296 - 3653273 - G 81 -9.6 -4.0348 | ACACCACAGCAGAAA TGACATTGCC GTAG GGCAAAGTCA CCGCATTAAACTGCG TERM 4290 3653855 - 3653840 - R 70 -9 -3.14564 | GGATTGCCGCAGGAA CAGCCT AGCT AGGCTG ACTATTGCCTAGAAC Shew185_3063 3655100 - 3653844 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 4291 3654978 - 3654964 - G 73 -7.2 -4.26076 | TGACTCTCACCAAAA CGATAA CTC TTATCG CCCTCAACTAAGGTC Shew185_3064 3655926 - 3655102 - | hypothetical protein TERM 4292 3655239 - 3655221 - G 71 -3 -4.96468 | opp_overlap 3655235 GAAAGCGAAATAAAA GCGTCC GTAAATT GGCCGC CGTGATCGGTTGGCG Shew185_3065 3657173 - 3655923 - | amine oxidase Shew185_3066 3657970 - 3657170 - | short-chain dehydrogenase/reductase SDR TERM 4293 3657595 - 3657584 - G 78 -5.8 -4.82855 | CATTAAAGGTAAAAA TGCC CCGA GGCA ATATCCCATTGCAAT Shew185_3067 3658416 - 3657970 - | transcriptional regulator-related protein Shew185_3068 3659942 - 3658440 - | deoxyribodipyrimidine photo-lyase TERM 4294 3658718 - 3658702 - G 70 -7.9 -3.95674 | AAAATGCGGAAATAA GGCTGAG CAT CGCAGCC ACAACCGGCGGACCA Shew185_3069 3660942 - 3659929 - | MerR family transcriptional regulator TERM 4295 3660831 - 3660821 - G 71 -4.6 -4.59376 | overlap 3660823 ATCACTAAACCAAAA CGGC GCT GCCA TGCCCTTAAGGTCAC TERM 4296 3660992 - 3660979 - R 74 -5.3 -4.81851 | ATTCAAAGCTAAAAA CTACT CACT AGTAG GCATAGCGCAGCTTC Shew185_3070 3661939 - 3660986 - | hypothetical protein Shew185_3071 3662241 - 3662747 + | hypothetical protein TERM 4297 3662941 - 3662920 - T 73 -6.6 -4.20367 | opp_overlap 3662917 3662920 TTCGGCAATAAATAA GCCTAAGC ATTTGA ACTTAGGC TGATATTTAATATTT Shew185_3072 3663331 - 3663047 - | heavy metal transport/detoxification protein Shew185_3073 3663690 - 3663328 - | mercuric transport protein MerT, putative TERM 4298 3663638 - 3663621 - GR 72 -9.1 -3.34522 | ATAGGCTTGAAGCAA CCGCAGC AATC ACTGCGG CGGCCATCGTCGCTA TERM 4299 3663649 - 3663667 + gr 76 -8.9 -3.73783 | TGCGGCGGCCATCGT CGCTAAG AGTCC CTTAGCG TTGTTCGGTTGACTG Shew185_3074 3664804 - 3663662 - | transglutaminase domain-containing protein TERM 4300 3665209 - 3665226 + H 71 -7.1 -3.9644 | opp_overlap 3665209 CAAACGTGCAGAGTA CTCATTT AATA AAATGAG TTATTCTCTTGGCCG Shew185_3075 3665570 - 3666646 + | hypothetical protein Shew185_3076 3666656 - 3667066 + | hypothetical protein Shew185_3077 3667111 - 3668730 + | methyl-accepting chemotaxis sensory transducer TERM 4301 3668814 - 3668838 + T 100 -15.9 -5.28176 | opp_overlap 3668814 TTTTCCTACAAAAAA TCGGTATTGAG TAA CTCAATACCGA TTTTTTATGCATCAA TERM 4302 3668838 - 3668814 - T 100 -15.9 -5.24129 | opp_overlap 3668814 TTTTCCTACAAAAAA TCGGTATTGAG TAA CTCAATACCGA TTTTTTATGCATCAA Shew185_3078 3670152 - 3668881 - | HAAAP family transport protein TERM 4303 3670341 - 3670327 - H 72 -4.3 -4.67552 | TTTATTAAAAAATAA TTGCA ATAAA TGCAA GAAATACAAATAATG Shew185_3079 3670409 - 3670792 + | putative endoribonuclease L-PSP TERM 4304 3671502 - 3671490 - g 85 -10.5 -4.30576 | opp_overlap 3671497, overlap 3671492 GTCGCACCATGAAAA GCGGC ATA GCCGC CGGCATTATTGGTGA Shew185_3080 3670817 - 3672091 + | hypothetical protein Shew185_3081 3672142 - 3672801 + | YheO domain-containing protein TERM 4305 3672860 - 3672830 - T 100 -12.1 -4.7373 | gap 1, opp_overlap 3672831 3672837, overlap 3672837 TCAGGGTATCAAAAA CAAAAAAGCAGCGA ATAT TCGCTGC-TTTTTG TTGTGTAAACTAATC TERM 4306 3672831 - 3672860 + T 90 -12.3 -3.50869 | opp_overlap 3672830 3672837, overlap 3672837 CAGGGTATCAAAAAC AAAAAAGCAGCGA ATAT TCGCTGCTTTTTG TTGTGTAAACTAATC TERM 4307 3672854 - 3672837 - T 100 -11.3 -5.95286 | opp_overlap 3672837 3672831, overlap 3672830 ATCAAAAACAAAAAA GCAGCGA ATAT TCGCTGC TTTTTGTTGTGTAAA TERM 4308 3672837 - 3672854 + T 100 -11.3 -5.24796 | opp_overlap 3672830 3672837, overlap 3672831 ATCAAAAACAAAAAA GCAGCGA ATAT TCGCTGC TTTTTGTTGTGTAAA Shew185_3082 3673807 - 3672893 - | hypothetical protein TERM 4309 3673593 - 3673570 - G 78 -6 -4.82855 | gap 1, overlap 3673572 TAGCAAAGGTAAAAA TACTGGTCAGG ATC CCCG-CCAGCA GACTCACTAAAAAGC Shew185_3083 3674032 - 3674532 + | hypothetical protein TERM 4310 3674570 - 3674596 + T 88 -8 -5.09426 | opp_overlap 3674576, overlap 3674571 3674576 CTTAATGTCTGCATT TAAAAAGGGAGC TAA GCTCCCTTTTAC TTTTTTAGCCTTCAG TERM 4311 3674571 - 3674595 + T 88 -11.5 -3.64933 | opp_overlap 3674576, overlap 3674570 3674576 TTAATGTCTGCATTT AAAAAGGGAGC TAA GCTCCCTTTTA CTTTTTTAGCCTTCA TERM 4312 3674576 - 3674590 + T 95 -11.4 -4.86862 | opp_overlap 3674576, overlap 3674571 3674570 GTCTGCATTTAAAAA GGGAGC TAA GCTCCC TTTTACTTTTTTAGC TERM 4313 3674590 - 3674576 - T 93 -11.4 -4.65895 | opp_overlap 3674576 3674571 3674570 GTCTGCATTTAAAAA GGGAGC TAA GCTCCC TTTTACTTTTTTAGC Shew185_3084 3675654 - 3674827 - | purine nucleoside phosphorylase Shew185_3085 3675790 - 3676707 + | LysR family transcriptional regulator TERM 4314 3676921 - 3676905 - g 70 -2.2 -4.86033 | overlap 3676906 AAACGGGTACAAAAA GGCAGT TCAGT ACTGCA TGCCGAAATGGATTG Shew185_3086 3676773 - 3677210 + | cytosine deaminase TERM 4315 3678149 - 3678169 + G 74 -11.2 -2.82668 | overlap 3678148 TGCTAGCCAGCGTGA CGGTATCG CTACT CGATACCG GTTTAGACTTTACGA Shew185_3087 3677335 - 3678570 + | hypothetical protein Shew185_3088 3678789 - 3679139 + | hypothetical protein Shew185_3089 3679859 - 3679245 - | TetR family transcriptional regulator TERM 4316 3679971 - 3679913 - H 70 -7.9 -3.77464 | gap 3, overlap 3679915 3679918 ACATTAGCTAGCAAA TATCAGCCGTATCTTCTCACGAGTAGAC AAATCA GTCTACCCATGAGAAGATAC--CCGA-A AGTAGACAGATTGGT TERM 4317 3679970 - 3679915 - H 95 -13 -3.46914 | gap 2, overlap 3679913 3679918 ATTAGCTAGCAAATA TCAGCCGTATCTTCTCACGAGTAGAC AAATCA GTCTACCCATGAGAAGATAC--CCGA AAGTAGACAGATTGG TERM 4318 3679968 - 3679918 - H 91 -13.6 -2.87769 | gap 1, overlap 3679915 3679913 AGCTAGCAAATATCA GCCGTATCTTCTCACGAGTAGAC AAATCA GTCTACCCATGAGAAGATACC-C GAAAGTAGACAGATT Shew185_3090 3680162 - 3680641 + | HPP family protein? TERM 4319 3680664 - 3680688 + T 93 -12.9 -3.32498 | opp_overlap 3680664 3680667, overlap 3680667 TTAATCGCCAATAAA GAAGGGCAACC TTA GATTGCCCTTC TTACTCTCTAACATA TERM 4320 3680688 - 3680664 - T 100 -15.1 -4.183 | opp_overlap 3680664 3680667, overlap 3680667 TTAATCGCCAATAAA GAAGGGCAACC TTA GATTGCCCTTC TTACTCTCTAACATA TERM 4321 3680667 - 3680685 + T 77 -8.8 -3.80018 | opp_overlap 3680664 3680667, overlap 3680664 ATCGCCAATAAAGAA GGGCAACC TTA GATTGCCC TTCTTACTCTCTAAC TERM 4322 3680685 - 3680667 - T 90 -11 -4.20768 | opp_overlap 3680667 3680664, overlap 3680664 ATCGCCAATAAAGAA GGGCAACC TTA GATTGCCC TTCTTACTCTCTAAC Shew185_3091 3682082 - 3680727 - | short chain fatty acid transporter TERM 4323 3681676 - 3681657 - G 73 -10 -3.31869 | gap 1, overlap 3681648 3681655 CACAAAGCCAGAATA GGC-GCTGG CGA CCAGCAGCC GATAATCCACTTTCA Shew185_3092 3682317 - 3682787 + | peptidylprolyl isomerase FKBP-type TERM 4324 3682823 - 3682842 + T 100 -10.7 -5.76633 | opp_overlap 3682823 ATCGCATAATAAAAA GCCCTGC ATTATC GCAGGGC TTTTTTTCTCTATAA TERM 4325 3682842 - 3682823 - T 100 -11.4 -5.19328 | opp_overlap 3682823 ATCGCATAATAAAAA GCCCTGCA TTAT CGCAGGGC TTTTTTTCTCTATAA Shew185_3093 3685491 - 3682885 - | glycoside hydrolase family protein TERM 4326 3685663 - 3685678 + r 71 -7.6 -3.92659 | overlap 3685648 CGGAGGCTTTGCGTC CCAGTT TTTC AACTGG TTTGCCTTTTACACG TERM 4327 3685904 - 3685870 - R 100 -7.3 -5.96219 | opp_overlap 3685870 TAGCCATAAAAAAAA CAGGACACGATAA-GCC AAA GGCATCACC-TGTCCTG TTATCAATTTCACTA Shew185_3094 3686793 - 3686008 - | ROK family protein TERM 4328 3686309 - 3686297 - G 71 -9.1 -3.51924 | opp_overlap 3686296 3686297 CGGCTACGCACAGAA TCGCC ACT GGCGA GTTGTTCTAAACTAA TERM 4329 3687150 - 3687170 + H 70 -9.7 -2.52543 | opp_overlap 3687127 CAAGCTTTGCCTACC GACTCGCAC AGC GTGCCAGTC TCACTTGGAGCCCAT Shew185_3095 3687186 - 3688973 + | peptidase M24 TERM 4330 3689098 - 3689064 - T 100 -14.4 -4.41548 | opp_overlap 3689069, overlap 3689069 TTATATGCTACAAAA TAAAACGCCCAAGGCT ATG AGTCTTGGGCGTTTTT TTAGCGCTGATGCTG TERM 4331 3689069 - 3689093 + T 100 -16.5 -5.42259 | opp_overlap 3689064 3689069 TGCTACAAAATAAAA CGCCCAAGGCT ATG AGTCTTGGGCG TTTTTTTAGCGCTGA TERM 4332 3689093 - 3689069 - T 100 -14.3 -5.18371 | opp_overlap 3689069, overlap 3689064 TGCTACAAAATAAAA CGCCCAAGGCT ATG AGTCTTGGGCG TTTTTTTAGCGCTGA Shew185_3096 3690485 - 3689220 - | metal dependent phosphohydrolase TERM 4333 3689591 - 3689612 + g 73 -8.7 -3.86202 | AACTGCGTAACACTT GCCCACC AATCACAG GGTGGGC TTTGATCTGCTCAAA TERM 4334 3690976 - 3690963 - H 71 -3.9 -4.99638 | ATACCCATACAAAAA TGATA GTCT TATCA CATAACAAGCTTACC TERM 4335 3691006 - 3690985 - H 71 -7.3 -3.9093 | overlap 3691005 CTTATCACATAACAA GCTTACCCC AATG AGAGTAAGC GCAAGAAAATTAGCG TERM 4336 3692399 - 3692368 - g 83 -9.4 -4.31837 | gap 1 AAGAAATGGAACAAA GCCGCCAACAC-GCG GAG CGCTGCGCTAGCGAC ATCCAACTGTCCGCC Shew185_3097 3691080 - 3692648 + | methyl-accepting chemotaxis sensory transducer TERM 4337 3692689 - 3692668 - f 90 -12.3 -3.70636 | opp_overlap 3692668 AAGCAAGATATAGAA TGCCGCAGC CAAA ACTGCGGCA TTTTTCTATCGCGTT TERM 4338 3692668 - 3692689 + F 95 -11.6 -4.98522 | opp_overlap 3692668 AAGCAAGATATAGAA TGCCGCAG CCAAAA CTGCGGCA TTTTTCTATCGCGTT TERM 4339 3692818 - 3692837 + F 84 -7.8 -4.67943 | AATTGGTCCTATCCC GCCTGAGC CGTC GCTAAGGC TTTTATCTCTTGGCG TERM 4340 3693491 - 3693503 + G 85 -7.7 -4.77036 | CTGTAACTTAAGCCT GTCGA ACG TCGAC TTTTTAGTCCTAGAC TERM 4341 3694076 - 3694086 + G 71 -6.8 -4.13995 | opp_overlap 3694075 3694076, overlap 3694059 CCGTGCGGGTAAAAC TGGC GTA GCCA TTTCATTTGTGAGCC Shew185_3098 3693054 - 3694355 + | DEAD/DEAH box helicase domain-containing protein TERM 4342 3694418 - 3694443 + T 100 -17.7 -5.93809 | opp_overlap 3694418 CGTGTTTTAGTGAAA TCGGCCACAAC AATT GTTGTGGCCGA TTTTTTTTATGCCCA TERM 4343 3694443 - 3694418 - T 100 -17.7 -3.64703 | opp_overlap 3694418 CGTGTTTTAGTGAAA TCGGCCACAAC AATT GTTGTGGCCGA TTTTTTTTATGCCCA Shew185_3099 3695899 - 3694499 - | amino acid permease-associated region Shew185_3100 3696811 - 3695909 - | homocysteine S-methyltransferase TERM 4344 3696486 - 3696468 - G 72 -5.9 -4.41348 | GCGGCCTCAAATAAA TCGGCAC GGTAA GAGCCGA ACAAGGGTGGCAATG TERM 4345 3696968 - 3696949 - R 71 -6.5 -4.24123 | opp_overlap 3696948 TTAATAACTGCAAAA CCATCTA GACGTT TAGATGG CTATTACAAAGTAAC Shew185_3101 3697470 - 3697255 - | hypothetical protein TERM 4346 3698150 - 3698134 - g 73 -2.1 -5.14563 | opp_overlap 3698134 3698135 3698144, overlap 3698135 TTTCCGATGAAAAAA TGCTGGC AGC GCAAGCC TTTGGCTTAGCTTTT TERM 4347 3698144 - 3698161 + G 77 -6.3 -4.56597 | gap 1, opp_overlap 3698135 3698134, overlap 3698135 3698134 AAAAATGCTGGCAGC GC-AAGCC TTT GGCTTAGC TTTTTACACAAGCGA Shew185_3102 3697746 - 3698393 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Shew185_3103 3698493 - 3699128 + | hypothetical protein Shew185_3104 3699288 - 3700040 + | hypothetical protein TERM 4348 3700164 - 3700177 + T 75 -9.5 -3.35996 | opp_overlap 3700164 GTCATCAATAAAAAA GCGCC CGCA GGCGC TTATCGATACAGATC TERM 4349 3700177 - 3700164 - T 100 -9.5 -5.5112 | opp_overlap 3700164 GTCATCAATAAAAAA GCGCC CGCA GGCGC TTATCGATACAGATC Shew185_3105 3700783 - 3700250 - | hypothetical protein TERM 4350 3700611 - 3700590 - G 85 -4.5 -5.47159 | gap 1, overlap 3700607 TCGGAATAGAAAAAA TGCCGCTTAT CCG ACAAGCG-CA TCTGCACATCCGCAT TERM 4351 3700720 - 3700692 - G 72 -11 -2.53876 | TCCCAGTCCAACCCA GCCACGGCGG CAATTTGCT CCGCCGTGAC TAAACGTCCGTGTTG Shew185_3106 3702976 - 3700853 - | putative oxidoreductase TERM 4352 3702582 - 3702594 + g 77 -6.3 -4.57073 | GGTTCAATGGTGACC TTGTC ATC GACAA TTTTTAGCCACACTG Shew185_3107 3703637 - 3702993 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4353 3705107 - 3705092 - g 73 -7.6 -4.04318 | GTCACACAGCACAAA TTCCAG CAGA CTGGAA TGGCACTGTCGCGGG TERM 4354 3705277 - 3705293 + G 74 -10.9 -3.01712 | opp_overlap 3705277 3705274 TACCAAATTAAGTTA CTGAGCT CGC AGCTCAG TGTTGAGGCGCAAAC TERM 4355 3705293 - 3705277 - g 72 -10.9 -2.64134 | opp_overlap 3705277, overlap 3705274 TACCAAATTAAGTTA CTGAGCT CGC AGCTCAG TGTTGAGGCGCAAAC Shew185_3108 3703993 - 3706359 + | hypothetical protein TERM 4356 3706418 - 3706387 - T 100 -18.2 -4.57073 | opp_overlap 3706387 3706392, overlap 3706392 TATCTCGCCCAAAAA CAAAACCGCTCGCA ATAA TGCGAGCGGTTTTA TTTAATCAAGCTGAT TERM 4357 3706387 - 3706418 + T 100 -16 -3.73953 | opp_overlap 3706387 3706392, overlap 3706392 TATCTCGCCCAAAAA CAAAACCGCTCGCA ATAA TGCGAGCGGTTTTA TTTAATCAAGCTGAT TERM 4358 3706413 - 3706392 - T 100 -15.9 -5.26119 | opp_overlap 3706387 3706392, overlap 3706387 CGCCCAAAAACAAAA CCGCTCGCA ATAA TGCGAGCGG TTTTATTTAATCAAG TERM 4359 3706392 - 3706413 + T 100 -15.9 -4.93877 | opp_overlap 3706392 3706387, overlap 3706387 CGCCCAAAAACAAAA CCGCTCGCA ATAA TGCGAGCGG TTTTATTTAATCAAG Shew185_3109 3708326 - 3706548 - | band 7 protein TERM 4360 3707260 - 3707285 + g 78 -8.9 -3.97741 | TTCAGCTTTTCGGCT TCAGCTGCACG GGCT CGGGCAGCAGA TTCTTCTTCAGATTT Shew185_3110 3708998 - 3708363 - | hypothetical protein Shew185_3111 3709671 - 3709105 - | hypothetical protein TERM 4361 3709348 - 3709323 - G 85 -5.4 -5.24129 | overlap 3709326 GCTTGGCATAAAAAA CATCATCAGC TAAATC GCTGATGCCG CCACCGTGCACCACC Shew185_3112 3709735 - 3711240 + | carboxypeptidase Taq Shew185_3113 3711421 - 3711918 + | GCN5-related N-acetyltransferase Shew185_3114 3711915 - 3712265 + | hypothetical protein Shew185_3115 3712295 - 3712552 + | hypothetical protein Shew185_3116 3712607 - 3713116 + | RDD domain-containing protein TERM 4362 3713174 - 3713141 - T 89 -11.9 -3.74178 | opp_overlap 3713150, overlap 3713143 3713150 TAAGTAAATCCGAAA TACAAAAAACGACGC AAAA GCGTCGTTTTTTATG GGCTATTTTTTAGGG TERM 4363 3713172 - 3713143 - T 100 -14.5 -3.44321 | opp_overlap 3713150, overlap 3713141 3713150 AGTAAATCCGAAATA CAAAAAACGACGC AAAA GCGTCGTTTTTTA TGGGCTATTTTTTAG TERM 4364 3713165 - 3713150 - T 100 -10.4 -5.56264 | opp_overlap 3713150, overlap 3713143 3713141 CCGAAATACAAAAAA CGACGC AAAA GCGTCG TTTTTTATGGGCTAT TERM 4365 3713150 - 3713165 + T 100 -10.4 -5.26918 | opp_overlap 3713150 3713143 3713141 CCGAAATACAAAAAA CGACGC AAAA GCGTCG TTTTTTATGGGCTAT Shew185_3117 3714301 - 3713243 - | permease YjgP/YjgQ family protein Shew185_3118 3715410 - 3714298 - | permease YjgP/YjgQ family protein TERM 4366 3714990 - 3715008 + g 73 -5.2 -4.58283 | opp_overlap 3714982, overlap 3714978 GTACTAAGGCCGCAA GCCCGG CTTCGGA CTGGGC TTTTTCGAGCACTTG TERM 4367 3716452 - 3716440 - g 74 -2.7 -5.02502 | GATAGCACAGAAAAA CCAAT CGT ATTAG TCGGTAAAGGATTAA Shew185_3119 3715654 - 3717162 + | leucyl aminopeptidase TERM 4368 3717227 - 3717206 - f 100 -13.1 -4.18644 | opp_overlap 3717206 ATCAGATAAATCAAA GGCGAAGAT GAAA ATCTTCGCC TTTTTTATTCGCTAT TERM 4369 3717206 - 3717227 + F 100 -13.1 -5.49234 | opp_overlap 3717206 ATCAGATAAATCAAA GGCGAAGAT GAAA ATCTTCGCC TTTTTTATTCGCTAT Shew185_3120 3717484 - 3718008 + | DNA polymerase III chi subunit HolC Shew185_3121 3718029 - 3720905 + | valyl-tRNA synthetase TERM 4370 3720980 - 3720953 - T 100 -15.6 -3.17075 | opp_overlap 3720954 3720957, overlap 3720957 TTGGTTCTAACTGAA TGAAGGGCAGCC ACTA GGCTGCCCTTCT TATATCTATATCGCT TERM 4371 3720954 - 3720979 + T 100 -19.1 -3.66896 | opp_overlap 3720953 3720957, overlap 3720957 TGGTTCTAACTGAAT GAAGGGCAGCC ACTA GGCTGCCCTTC TTATATCTATATCGC TERM 4372 3720976 - 3720957 - T 100 -15 -3.4052 | opp_overlap 3720954 3720957, overlap 3720953 TTCTAACTGAATGAA GGGCAGCC ACTA GGCTGCCC TTCTTATATCTATAT TERM 4373 3720957 - 3720976 + T 100 -15 -3.95786 | opp_overlap 3720957 3720953, overlap 3720954 TTCTAACTGAATGAA GGGCAGCC ACTA GGCTGCCC TTCTTATATCTATAT TERM 4374 3721535 - 3721514 - T 100 -14.5 -5.95286 | opp_overlap 3721514 ACTAAAAATAAAAAA GCCCTGCAA TTGC TTGCAGGGC TTATCTATATGGTGC TERM 4375 3721514 - 3721535 + T 100 -14.5 -3.65656 | opp_overlap 3721514 ACTAAAAATAAAAAA GCCCTGCAA TTGC TTGCAGGGC TTATCTATATGGTGC TERM 4376 3722755 - 3722738 - T 100 -6.3 -6.04324 | opp_overlap 3722738 CTAAAAAATAAAAAA GCCAGTT AAAA AACTGAC TCTTCTGTTGCCGTA Shew185_3122 3722990 - 3722793 - | carbon storage regulator, CsrA Shew185_3123 3724365 - 3723109 - | aspartate kinase TERM 4377 3724140 - 3724169 + g 71 -7.1 -3.96624 | overlap 3724141 3724144 TTGACACTAACATGT CTAATTCGCGCGC CGAG GCCCGCGGATTAA TTTGTGCTGCCAGTG TERM 4378 3724141 - 3724168 + g 72 -10.6 -2.97653 | overlap 3724140 3724144 TGACACTAACATGTC TAATTCGCGCGC CGAG GCCCGCGGATTA ATTTGTGCTGCCAGT Shew185_3124 3726999 - 3724375 - | alanyl-tRNA synthetase Shew185_3125 3727755 - 3727342 - | regulatory protein RecX TERM 4379 3727811 - 3727784 - R 100 -17.8 -3.65314 | gap 1, opp_overlap 3727784 TGTAAGCGGGAATAA TCGCGG-CGCGCT AAC AGCGCGACCGCGA TTTGACGGGCTGACT TERM 4380 3727784 - 3727811 + r 100 -17.8 -3.54543 | gap 1, opp_overlap 3727784 TGTAAGCGGGAATAA TCGCGG-CGCGCT AAC AGCGCGACCGCGA TTTGACGGGCTGACT Shew185_3126 3728897 - 3727830 - | recombinase A TERM 4381 3729326 - 3729315 - g 71 -3 -4.88736 | GATGATTTAGAAAAA CATA CTCC TATG ATGCGTCAGTACTTG TERM 4382 3729727 - 3729748 + G 75 -5.9 -4.5442 | gap 1, overlap 3729727 3729728 GTTTTGGTTATGCCA C-TCTGGATG TTT CATCCGGACG TTTTGTGATTGCCGA Shew185_3127 3729282 - 3731852 + | DNA mismatch repair protein TERM 4383 3731917 - 3731936 + T 100 -13.6 -4.73108 | opp_overlap 3731917 3731901 GATTAGAAACAACAA CGCCCACT CTTT AGTGGGCG TTTTACTTTTATCGA TERM 4384 3731936 - 3731917 - T 100 -13.6 -4.17309 | opp_overlap 3731917, overlap 3731901 GATTAGAAACAACAA CGCCCACT CTTT AGTGGGCG TTTTACTTTTATCGA Shew185_3128 3733036 - 3732056 - | RpoD family RNA polymerase sigma factor TERM 4385 3732473 - 3732484 + g 70 -2.2 -4.9218 | TTCTTCAGCCGTTGG TTCG TGAT CGAG TTTTTGTGCTAACTC Shew185_3129 3734013 - 3733117 - | peptidase M23B TERM 4386 3733217 - 3733246 + g 73 -3.6 -4.90778 | gap 1, overlap 3733226 GTACTGCCCATTTTT GCAAC-TGTCTGC CCTGC GAGGACATGTTGC TTTTCTTTGACTAAG TERM 4387 3733675 - 3733685 + g 74 -6.8 -4.44548 | ACTAGAATTATTACT CGAG GAG CTCG TTTTCCTTCCATCTA Shew185_3130 3734749 - 3734114 - | protein-L-isoaspartate O-methyltransferase Shew185_3131 3735495 - 3734746 - | stationary-phase survival protein SurE Shew185_3132 3736625 - 3735492 - | tRNA pseudouridine synthase D TruD Shew185_3133 3737131 - 3736646 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Shew185_3134 3737960 - 3737169 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Shew185_3135 3738329 - 3737973 - | septum formation initiator TERM 4388 3738153 - 3738166 + g 71 -3.1 -4.85782 | TTTGGCGTTACCTTC TTGCT GCGC GGCAA TTTGTTTTTGCAGGA TERM 4389 3738351 - 3738334 - R 100 -12.7 -5.58179 | opp_overlap 3738334 TAGTACAACAAAAAA GGCCACC AAGT GGTGGCC TTTTTACATCAAAGT TERM 4390 3738334 - 3738351 + r 100 -12.7 -4.66163 | opp_overlap 3738334 TAGTACAACAAAAAA GGCCACC AAGT GGTGGCC TTTTTACATCAAAGT Shew185_3136 3739667 - 3738372 - | phosphopyruvate hydratase TERM 4391 3739886 - 3739859 - R 100 -16.2 -4.66318 | opp_overlap 3739855 ATGAGTGTAACAAAA GGCCGGCCCCAC TGTC GCGGGTCCGGCC TCAAATATTCTTACT Shew185_3137 3741534 - 3739897 - | CTP synthetase TERM 4392 3740417 - 3740403 - G 72 -5.7 -4.48299 | opp_overlap 3740402 GCATACCTAAACAAA TACCG AAATA CGGTA GATTGTTTTCACGGG Shew185_3138 3742547 - 3741651 - | nucleoside triphosphate pyrophosphohydrolase TERM 4393 3743131 - 3743144 + G 83 -6.7 -4.96848 | opp_overlap 3743131 3743130 CCGTTAACGACTAAG CCATC TCAA GATGG TTTTTATATGCCCGC TERM 4394 3743989 - 3743969 - g 72 -11.1 -2.54896 | overlap 3743965 GCGTGACCGAAGGCA CTGGCGTGC CAC GCACGGCAG GTGAGCGCTTAGCGG Shew185_3139 3743089 - 3744201 + | agmatine deiminase TERM 4395 3745112 - 3745127 + G 78 -7.6 -4.34402 | opp_overlap 3745112 CCGCTCAAGCAGACA CGCTTA AAGG TAAGCG TTTTGGTGTGCCGCG Shew185_3140 3744280 - 3745986 + | amidase TERM 4396 3746100 - 3746063 - T 100 -15.8 -2.93869 | opp_overlap 3746068, overlap 3746068 CATGAGCTTAGAAAT GAAAACGGGATTGGCA TCAATT TGCCAATCCCGTTTTT TTTAGCACTAATGTC TERM 4397 3746095 - 3746068 - T 100 -15.7 -4.61873 | opp_overlap 3746068, overlap 3746063 GCTTAGAAATGAAAA CGGGATTGGCA TCAATT TGCCAATCCCG TTTTTTTTAGCACTA TERM 4398 3746068 - 3746095 + T 100 -15.7 -5.76949 | opp_overlap 3746068 3746063 GCTTAGAAATGAAAA CGGGATTGGCA TCAATT TGCCAATCCCG TTTTTTTTAGCACTA Shew185_3141 3747258 - 3746179 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 4399 3746984 - 3746972 - G 77 -6.3 -4.57569 | TTACGTTTTGAAAAA TCAAC GCC GTTGA GGTGCTCAATAAAGG Shew185_3142 3748288 - 3747314 - | hypothetical protein TERM 4400 3750250 - 3750231 - g 74 -9.4 -3.7014 | overlap 3750243 GAAATTTGAATATAA CTCACAAA GGTA TTTGTGAG GACAAAGCTAAAATG Shew185_3143 3749069 - 3750469 + | hypothetical protein TERM 4401 3750764 - 3750737 - T 83 -12.6 -2.62616 | TGATTTGCGAGACGA CCGTCCGCCCCA TGGA CGGGGCGGTCGA GCATCCACGGATGGA Shew185_3144 3753125 - 3750918 - | (p)ppGpp synthetase I, SpoT/RelA TERM 4402 3752598 - 3752620 + g 71 -6.9 -4.2461 | overlap 3752599 ATAAATATCGGCAAT TTCGCGGGC CAGTA GCACGCGAG TTTCTTCGTCGGCAT TERM 4403 3753170 - 3753160 - R 71 -6.8 -4.12532 | opp_overlap 3753152 GTGCTCAGAGAGAAA GTGG GCA CCAC TTCAGCTCTCCTATC Shew185_3145 3754630 - 3753278 - | 23S rRNA 5-methyluridine methyltransferase Shew185_3146 3754731 - 3757532 + | hybrid sensory histidine kinase BarA Shew185_3147 3757507 - 3758106 + | hypothetical protein TERM 4404 3758113 - 3758138 + F 100 -13.3 -4.06687 | GTCGCTTAATTGATC GGGTGCTTGGG ATAA CTCAGGCACCC TTATTTCTAAACAGT Shew185_3148 3758366 - 3758599 + | hypothetical protein Shew185_3149 3759520 - 3758621 - | LysR family transcriptional regulator TERM 4405 3760395 - 3760381 - g 80 -7 -4.60797 | overlap 3760383 GCGCTAGAGATAAAA CTGCCC TCA GGGCTG GCGCTAATGATCCAG Shew185_3150 3759820 - 3760782 + | auxin efflux carrier TERM 4406 3762015 - 3762000 - g 70 -2.4 -4.92314 | overlap 3762002 AGCAACGCACAAAAA CTCAGC CAAA GCCGCG CTAGATATGCCAAAG Shew185_3151 3760911 - 3762569 + | recombination and repair protein Shew185_3152 3763219 - 3762725 - | phosphatidylglycerophosphatase A Shew185_3153 3764190 - 3763219 - | thiamine-monophosphate kinase TERM 4407 3764220 - 3764249 + r 100 -12.3 -4.33621 | opp_overlap 3764226, overlap 3764226 ACCTTTGTTAGCAAT GAAAAACGGTATC CTAA GATACCGTTTGTC TTTATTACTTGCGTG TERM 4408 3764226 - 3764243 + r 90 -9.9 -4.46976 | opp_overlap 3764226, overlap 3764220 GTTAGCAATGAAAAA CGGTATC CTAA GATACCG TTTGTCTTTATTACT TERM 4409 3764243 - 3764226 - R 93 -9.9 -4.90266 | opp_overlap 3764226 3764220 GTTAGCAATGAAAAA CGGTATC CTAA GATACCG TTTGTCTTTATTACT Shew185_3154 3764658 - 3764254 - | transcription antitermination protein NusB Shew185_3155 3765149 - 3764670 - | 6,7-dimethyl-8-ribityllumazine synthase Shew185_3156 3766383 - 3765280 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase Shew185_3158 3767363 - 3766707 - | riboflavin synthase subunit alpha Shew185_3159 3768529 - 3767375 - | riboflavin biosynthesis protein RibD TERM 4410 3768356 - 3768370 + g 73 -4.9 -4.77036 | overlap 3768352 GGCATGCACTTCGGC GTGGG GCTCA CCCGC TTTTTGATGATAACC Shew185_3160 3769125 - 3768676 - | transcriptional regulator NrdR TERM 4411 3769149 - 3769167 + r 83 -11.8 -3.22886 | opp_overlap 3769148, overlap 3769147 3769145 CTGCCAGTGAATGAC GTAAAGCC GTT GGCTTTAC TATGTTATCTAAGGT TERM 4412 3769241 - 3769223 - R 100 -11.7 -5.1356 | opp_overlap 3769220 3769219 TTTTAGCAATAAAAA TGGCCGC TTAAT GCGGCCA TGGGATTTTATCCTA Shew185_3161 3770579 - 3769326 - | serine hydroxymethyltransferase TERM 4413 3770556 - 3770567 + g 74 -3 -5.055 | CGGATCATAATCTGC GATA TTCA TATC TTTTTTCAGCATTGC TERM 4414 3770831 - 3770852 + G 71 -4.5 -4.56597 | overlap 3770832 GCCTAAGAAGCAGAT CCTTAAAGA TATT TCTTTAAGC TTTTTCCCCGGCGCC TERM 4415 3771272 - 3771285 + G 73 -8.1 -3.98826 | overlap 3771282 ATCCGGTGGTGAACG TCGCC GTGT GGCGA TTTGTCGCTTGCTGC TERM 4416 3772386 - 3772376 - g 71 -4.6 -4.58663 | AGCATGGTTGAAAAA CACC TAT GGCG CCGATGTGGTTGAGC Shew185_3162 3770769 - 3772436 + | putative ABC transporter ATP-binding protein TERM 4417 3772630 - 3772657 + T 100 -17.8 -5.11063 | opp_overlap 3772630 TGATTAAGCAAAAAA GGAGCGCAGGTC GAAG GATCTGCGCTCC TTTTTATTGGATGCT TERM 4418 3772657 - 3772630 - T 100 -15.6 -5.30155 | opp_overlap 3772630 TGATTAAGCAAAAAA GGAGCGCAGGTC GAAG GATCTGCGCTCC TTTTTATTGGATGCT Shew185_3163 3773709 - 3772765 - | LysR family transcriptional regulator Shew185_3164 3773983 - 3774906 + | beta-lactamase domain-containing protein TERM 4419 3774984 - 3775007 + F 76 -2.3 -5.47821 | opp_overlap 3774985, overlap 3774985 CAAACAGTTAAAGAC AGGCACGTG TTCGAT TGCGTGCCA TTTTTTTAGCTAAAT Shew185_3165 3775127 - 3775819 + | putative protein-disulfide isomerase TERM 4420 3776121 - 3776143 + G 78 -6.2 -4.74103 | opp_overlap 3776121 3776124, overlap 3776125 GGTCGATATCGAAGA CTATGTCGCC CAA GGCGATAAGG TTTTTGCCTTCGGCA Shew185_3166 3775822 - 3776292 + | hypothetical protein Shew185_3167 3776618 - 3777820 + | metallophosphoesterase Shew185_3168 3778011 - 3778805 + | hypothetical protein TERM 4421 3778858 - 3778847 - f 83 -3.6 -5.60993 | CTTTGCACAAAAAAA CCGC AAAA GCAG CGTTGAATTGTGCTT Shew185_3169 3779016 - 3780125 + | RND family efflux transporter MFP subunit TERM 4422 3781396 - 3781373 - g 87 -6.6 -5.05601 | CACCATATAGAAAAA GGCGAAGAGC CCTT ACTCGCCGCC TATAAAGGCACCCGC TERM 4423 3781831 - 3781817 - g 71 -9.2 -3.53012 | opp_overlap 3781816 TTCGCCTTTGTTAAA GGCGCC GAA GGCACC AGTTATAACCGTATG Shew185_3170 3780125 - 3783268 + | acriflavin resistance protein TERM 4424 3783327 - 3783305 - T 100 -17.8 -5.25699 | opp_overlap 3783305 ATCACATAACAAAAA GCCAAGGCAC TGA GTGCCTTGGC TTTTTCTCATTTACG TERM 4425 3783305 - 3783327 + T 100 -17.8 -5.04325 | opp_overlap 3783305 ATCACATAACAAAAA GCCAAGGCAC TGA GTGCCTTGGC TTTTTCTCATTTACG Shew185_3171 3784508 - 3783345 - | Bcr/CflA subfamily drug resistance transporter TERM 4426 3784656 - 3784644 - H 83 -3.3 -5.69023 | opp_overlap 3784644 AAAACATCAAAAAAA GGACA AAA TGGCC TTTATTCTACCTGAA TERM 4427 3785263 - 3785276 + G 70 -8.1 -3.83205 | GCTTATCAAGCATGG CGCCA GCAA TGGCG TTTACTCTCGGCCAT Shew185_3172 3784651 - 3785418 + | AraC family transcriptional regulator Shew185_3173 3786402 - 3785491 - | hypothetical protein Shew185_3174 3786597 - 3787460 + | helix-turn-helix domain-containing protein Shew185_3175 3787754 - 3788227 + | hypothetical protein TERM 4428 3788265 - 3788240 - T 100 -9.8 -5.28942 | TAGCGCAAATAAAAA TGCTGCTATC CATCAC GACAGCAGCA TCTGAAGTTCACTAT Shew185_3176 3788782 - 3788306 - | globin Shew185_3177 3789648 - 3788779 - | hypothetical protein Shew185_3178 3792040 - 3789734 - | diguanylate cyclase/phosphodiesterase TERM 4429 3791868 - 3791826 - G 78 -6.2 -4.67038 | overlap 3791827 CGCTTAAAACCAAAA TCGGCACTGAGCACAGACAA ACT TTGGCTGAGCTGAATACCGC GATTAGAAAGAACTT TERM 4430 3791867 - 3791827 - G 73 -9.7 -3.395 | overlap 3791826 GCTTAAAACCAAAAT CGGCACTGAGCACAGACAA ACT TTGGCTGAGCTGAATACCG CGATTAGAAAGAACT Shew185_3179 3792707 - 3792030 - | hypothetical protein TERM 4431 3793255 - 3793237 - R 100 -10.3 -5.80003 | opp_overlap 3793237 CGAACAAACAAAAAA GGCCTAC TTGAT GTAGGCC TTTTTTACGCATTTA TERM 4432 3793237 - 3793255 + r 93 -10.3 -5.07107 | opp_overlap 3793237 CGAACAAACAAAAAA GGCCTAC TTGAT GTAGGCC TTTTTTACGCATTTA Shew185_3180 3796448 - 3793290 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 4433 3796411 - 3796392 - G 79 -3.5 -5.24129 | CCCTGTGATAAAAAA CAGCAGT GAGAGT ACGGCTG CAAATATCGGTCTTT Shew185_3181 3797700 - 3796462 - | RND family efflux transporter MFP subunit Shew185_3182 3798094 - 3798717 + | TetR family transcriptional regulator TERM 4434 3798790 - 3798763 - T 71 -4.8 -4.63048 | opp_overlap 3798764, overlap 3798764 CGCACAAACAATAAA CCCCAGTTGAGC TCTC ACTTAACTGGGT TTTTATTTATGCTTT TERM 4435 3798789 - 3798764 - T 70 -8.3 -3.36744 | opp_overlap 3798764, overlap 3798763 GCACAAACAATAAAC CCCAGTTGAGC TCTC ACTTAACTGGG TTTTTATTTATGCTT TERM 4436 3798764 - 3798789 + T 100 -9.8 -5.4182 | opp_overlap 3798764 3798763 GCACAAACAATAAAC CCCAGTTGAG CTCTCA CTTAACTGGG TTTTTATTTATGCTT Shew185_3183 3799714 - 3798827 - | LysR family transcriptional regulator Shew185_3184 3799805 - 3800239 + | transmembrane pair domain-containing protein TERM 4437 3800310 - 3800260 - f 76 -9.3 -3.76169 | gap 2, opp_overlap 3800262 3800262, overlap 3800262 3800264 3800272 CTAACATCAACACAA CACACCATCAAACGAACCTCACAAA GCC TTTA-GTGGTTCGTTTGATGGCA-G TTTTGAAACCTATCC TERM 4438 3800309 - 3800262 - f 95 -13 -3.45396 | gap 1, opp_overlap 3800262 3800262, overlap 3800260 3800264 3800272 AACATCAACACAACA CACCATCAAACGAACCTCACAAA GCC TTTA-GTGGTTCGTTTGATGGCA GTTTTGAAACCTATC TERM 4439 3800262 - 3800310 + F 71 -6.8 -4.10657 | gap 1, opp_overlap 3800260 3800262 3800264 3800272, overlap 3800262 AACATCAACACAACA C-ACCATCAAACGAACCTCACAA AGCC TTTAGTGGTTCGTTTGATGGCAG TTTTGAAACCTATCC TERM 4440 3800307 - 3800264 - f 100 -15.6 -3.28453 | gap 1, opp_overlap 3800262 3800262, overlap 3800262 3800260 3800272 CATCAACACAACACA CCATCAAACGAACCTCACAAA GCC TTTA-GTGGTTCGTTTGATGG CAGTTTTGAAACCTA TERM 4441 3801009 - 3800995 - g 71 -4.3 -4.72007 | TTTTATCAAAAGAAA CAGAA ACCTA TTCTG GCTGACAATAAATGG Shew185_3185 3800569 - 3801393 + | extracellular solute-binding protein Shew185_3186 3802383 - 3801493 - | LysR family transcriptional regulator Shew185_3187 3802524 - 3803780 + | adenylosuccinate synthase TERM 4442 3803799 - 3803824 + T 100 -12.7 -5.15526 | opp_overlap 3803803 CGAAGTTTACCCCAA GCCATATTCGC TTCG GTGAATATGGC TTTTTACTTTTATAT Shew185_3188 3804920 - 3803940 - | putative CheW protein Shew185_3189 3805307 - 3805738 + | thioesterase superfamily protein Shew185_3190 3807561 - 3806068 - | diguanylate cyclase/phosphodiesterase Shew185_3191 3808497 - 3807655 - | putative signal transduction protein TERM 4443 3808200 - 3808223 + g 73 -5.2 -4.5852 | overlap 3808201 AAATGAACAATTGCT CCATCGCCAC CGAA GTTGCGATGC TTTTAATTTGAATTA Shew185_3192 3808840 - 3810207 + | peptidase U32 Shew185_3193 3810212 - 3810463 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shew185_3194 3810962 - 3812851 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 4444 3812916 - 3812890 - T 93 -13.8 -3.1355 | opp_overlap 3812890 TTGACTCACACTTAA GCCCACTAAGGT AAC AACTTAGTGGGC TTTTTAGTGATTTAC TERM 4445 3812890 - 3812916 + T 100 -13.8 -4.84363 | opp_overlap 3812890 TTGACTCACACTTAA GCCCACTAAGGT AAC AACTTAGTGGGC TTTTTAGTGATTTAC Shew185_3195 3813503 - 3812970 - | sterol-binding domain-containing protein Shew185_3196 3813641 - 3814651 + | peptidase U32 Shew185_3197 3814692 - 3815585 + | peptidase U32 Shew185_3198 3816466 - 3815768 - | hypothetical protein TERM 4446 3816183 - 3816173 - G 83 -4.6 -5.29782 | CAGACTGATAAAAAA GGGA TAT CCCC AGAAAGACGTTACTT TERM 4447 3816267 - 3816248 - G 80 -5 -5.07107 | TAAACTGCCAAAAAA TAATCCCC CGTT GAGGATCA CAGCAAAAGACGAAT TERM 4448 3816527 - 3816538 + H 71 -7.2 -3.94811 | opp_overlap 3816524 3816519 AGAAGATTTAAAGCG GCGG GTAT CCGC TTTATGAATAATATT TERM 4449 3817132 - 3817144 + H 70 -7.7 -3.63627 | ATTCAAATTTACCAT GTACG ACT CGTAC TTTAAGGTGTACAAA TERM 4450 3818081 - 3818064 - g 77 -4.7 -4.86033 | overlap 3818028 3818052 AAAGCCTTAGAAAAA GCCGCCA GTGC CGGTGGC ATCAAAGCCGTTTTG Shew185_3199 3817161 - 3818519 + | nucleoside recognition domain-containing protein TERM 4451 3818574 - 3818538 - T 70 -8 -3.61889 | opp_overlap 3818544, overlap 3818529 3818544 CAAAAACCTTTGAAA TATCAAGGGGAGTCAG GTTAA CTGACTCCCCTTTTTT GTGCTAACTCATACA TERM 4452 3818568 - 3818544 - T 100 -15.8 -3.45571 | opp_overlap 3818544, overlap 3818529 3818538 CCTTTGAAATATCAA GGGGAGTCAG GTTAA CTGACTCCCC TTTTTTGTGCTAACT TERM 4453 3818544 - 3818568 + T 100 -15.8 -5.31877 | opp_overlap 3818529 3818544 3818538 CCTTTGAAATATCAA GGGGAGTCAG GTTAA CTGACTCCCC TTTTTTGTGCTAACT TERM 4454 3820407 - 3820429 + T 72 -9.8 -3.05159 | opp_overlap 3820407, overlap 3820401 CAGGGGAATTGATAA GGGGGCGAGA CTG TCTAGCCTCC TATCCTTTGGTGTGG Shew185_3201 3821739 - 3820552 - | CgeB family protein TERM 4455 3821590 - 3821608 + g 100 -11.8 -4.67942 | ATAATCGGGCCTATC CGTCATGA TCC TCATGACG TTTTCGTTTATTGGC Shew185_3202 3822217 - 3821909 - | hypothetical protein Shew185_3203 3823452 - 3822334 - | putative transposase TERM 4456 3823810 - 3823788 - R 73 -9.9 -3.16668 | opp_overlap 3823788 CAACAGGGTGAGCAA GGTCGGTGA AATAA TCACCAACC TGTCGTAGGCCCCTT TERM 4457 3824522 - 3824506 - R 77 -9.5 -3.5332 | overlap 3824502 AAACGCGCAAACTAA TGAGTGT AAA ACACTCA AAAGCATCTAAATTT Shew185_3205 3825441 - 3824728 - | hypothetical protein TERM 4458 3825190 - 3825180 - G 71 -4 -4.68645 | GAGCTAAAACCAAAA CATT TAC AATG AAAAAGCCAACAAGA Shew185_3206 3825662 - 3825787 + | hypothetical protein TERM 4459 3827057 - 3827047 - g 88 -2.4 -5.74288 | ACAAACAACAAAAAA CGGC AGC GCAG CAAATGCCAAACACA Shew185_3207 3825984 - 3827108 + | metallophosphoesterase TERM 4460 3827707 - 3827672 - g 91 -6.8 -5.30686 | gap 1, opp_overlap 3827672 3827673 3827674 3827679, overlap 3827674 3827676 AACATTTAGAAAAAA TCCAC-CAGCACCTGCG TAA CGAAGGCGCTGTGCTGA TTTTCCCGTCGGGCG Shew185_3208 3827098 - 3829014 + | phospholipid/glycerol acyltransferase Shew185_3209 3829130 - 3829561 + | CBS domain-containing protein Shew185_3210 3830975 - 3829623 - | xanthine/uracil/vitamin C permease Shew185_3211 3831501 - 3831677 + | trimethylamine N-oxide reductase system TorE Shew185_3212 3831721 - 3832899 + | trimethylamine-N-oxide reductase c-type cytochrome TorC TERM 4461 3833095 - 3833082 - g 75 -5.2 -4.68506 | opp_overlap 3833092 AATGAAGCGCAAAAA CGGC GTCATT GCCG AAGTGAAACCCTTCG Shew185_3213 3832915 - 3835404 + | trimethylamine-N-oxide reductase TorA TERM 4462 3835451 - 3835419 - f 91 -12 -3.80893 | gap 1, overlap 3835420 ACCTTAGAACCGAAA CGCTG-GATGCGCCG AACG CGGCGCGTCTCAGCA TCCAATCTTAGCGCC TERM 4463 3835450 - 3835420 - f 90 -13.3 -2.88054 | gap 1, overlap 3835419 CCTTAGAACCGAAAC GCTG-GATGCGCCG AACG CGGCGCGTCTCAGC ATCCAATCTTAGCGC TERM 4464 3835645 - 3835626 - g 81 -12.2 -3.03159 | GCAATTCTGGGAACA GCTTAGCC TAGA GGCTAAGC TCACTCAGTCAGTGG Shew185_3214 3835495 - 3836124 + | chaperone protein TorD Shew185_3215 3839294 - 3836202 - | multi-sensor hybrid histidine kinase Shew185_3216 3839353 - 3840444 + | periplasmic sensory protein associated with the TorRS two-component regulatory system Shew185_3217 3841138 - 3840428 - | DNA-binding transcriptional regulator TorR Shew185_3218 3841338 - 3841709 + | type IV pilus assembly PilZ TERM 4465 3841749 - 3841732 - T 100 -12.7 -4.40003 | opp_overlap 3841732 GCTCATAAACACAAA CAGCGCC TAAT GGCGCTG TTTTGCTTGCTGGCG TERM 4466 3841732 - 3841749 + T 100 -12.7 -4.45544 | opp_overlap 3841732 GCTCATAAACACAAA CAGCGCC TAAT GGCGCTG TTTTGCTTGCTGGCG Shew185_3219 3843228 - 3841864 - | DNA repair protein RadA TERM 4467 3844488 - 3844470 - g 78 -11.8 -3.05844 | overlap 3844476 CTTTGTATTTCAATA CTCAAACC CAA GGTTTGAG TCACATGCTACTCAG TERM 4468 3844616 - 3844627 + G 83 -7.2 -4.78121 | opp_overlap 3844616 3844615 AGTCATCCAGAGAAT CCCG ACCA CGGG TTATTTTTTAGTTTT TERM 4469 3844693 - 3844729 + G 79 -10.3 -3.64703 | opp_overlap 3844705, overlap 3844702 3844706 TGCCACCTTAGCCGA GCTTAAAGCTAAGGGCA TGA TGCCTTTATTTTTAGGC TTTGCGTCGACCAAA TERM 4470 3844702 - 3844720 + G 88 -8.2 -4.70879 | opp_overlap 3844705, overlap 3844693 3844706 AGCCGAGCTTAAAGC TAAGGGCA TGA TGCCTTTA TTTTTAGGCTTTGCG TERM 4471 3844706 - 3844716 + G 83 -6.8 -4.88293 | opp_overlap 3844705, overlap 3844702 3844693 GAGCTTAAAGCTAAG GGCA TGA TGCC TTTATTTTTAGGCTT TERM 4472 3845473 - 3845463 - g 75 -3.2 -5.00884 | ACTTTGTTGAAAAAA CGAC AAA ATCG GCCCAAGTCGCGTGT Shew185_3221 3843608 - 3845989 + | type IV pilus assembly PilZ Shew185_3222 3846981 - 3845986 - | alpha/beta hydrolase fold Shew185_3223 3848090 - 3847110 - | phosphoserine phosphatase SerB TERM 4473 3847834 - 3847797 - G 76 -11.3 -3.10701 | overlap 3847788 CAAAGACTGAGGGAA CGCCGCTAACTGTGCCT GAGA AGGCACATTCACCAGCG CCAACTCGATACAAT Shew185_3224 3848134 - 3849204 + | membrane protein TERM 4474 3849320 - 3849338 + F 73 -5.9 -4.62336 | opp_overlap 3849320 ATTGGCATAAAAAAA GGGTCCG CAATA CGAACCC TTTTTCCAGTAGCAT TERM 4475 3849338 - 3849320 - f 100 -8.8 -5.61596 | opp_overlap 3849320 ATTGGCATAAAAAAA GGGTCCGC AAT ACGAACCC TTTTTCCAGTAGCAT TERM 4476 3849402 - 3849370 - f 70 -8.6 -3.34398 | overlap 3849368 3849371 TCCCGTCCTGAAATA CGTTGACATAAAGA GGACT TCTTTATGACAACA TCAAGTAACTCAAGC TERM 4477 3849401 - 3849371 - f 70 -9.9 -2.60496 | overlap 3849370 3849368 CCCGTCCTGAAATAC GTTGACATAAAGA GGACT TCTTTATGACAAC ATCAAGTAACTCAAG Shew185_3225 3849394 - 3849789 + | transposase TERM 4478 3849832 - 3849791 - f 74 -5 -4.82998 | opp_overlap 3849789 3849791 CCAAAGCAAAATAAA CCTCGCCGTTGCATGTCG CGCTGT CGGCATTTCACGGCAAGG TATTTATCAGGCTGT Shew185_3226 3849855 - 3850622 + | integrase catalytic region TERM 4479 3850619 - 3850599 - T 100 -12.6 -4.73682 | GTGCATAATAGAAAA GGCCAGCT ACTGG AGCTGGCC TAGAAACTGTCAACC Shew185_3227 3851378 - 3850668 - | purine nucleoside phosphorylase Shew185_3228 3852684 - 3851470 - | phosphopentomutase Shew185_3229 3854025 - 3852694 - | thymidine phosphorylase TERM 4480 3852746 - 3852768 + g 77 -4.9 -5.00616 | gap 1, overlap 3852751 GGTGTTTTTTCTGGA GCGGTTTCAC CAAT GTGAA-TCGC TTTTTTCACCGCAAG TERM 4481 3854040 - 3854074 + r 82 -10.8 -3.60098 | opp_overlap 3854046 3854048 3854052, overlap 3854045 TGATACTGCCTCCAA GATAGACACTAACGAC CCT GTCGCTAGTGCTTATC TTTGCAATGAAACAT TERM 4482 3854045 - 3854069 + r 71 -7.1 -3.82946 | opp_overlap 3854046 3854048 3854052, overlap 3854040 CTGCCTCCAAGATAG ACACTAACGAC CCT GTCGCTAGTGC TTATCTTTGCAATGA TERM 4483 3854068 - 3854046 - R 84 -12.8 -3.09273 | opp_overlap 3854045 3854040, overlap 3854048 3854052 TGCCTCCAAGATAGA CACTAACGAC CCT GTCGCTAGTG CTTATCTTTGCAATG TERM 4484 3854066 - 3854048 - R 73 -9.6 -3.10493 | opp_overlap 3854045 3854040, overlap 3854046 3854052 CCTCCAAGATAGACA CTAACGAC CCT GTCGCTAG TGCTTATCTTTGCAA Shew185_3230 3854980 - 3854210 - | deoxyribose-phosphate aldolase TERM 4485 3855341 - 3855286 - R 71 -4.2 -4.84359 | overlap 3855293 TTAGCGCGAGAAAAA CACAAACCTTTATATAAACCCACTTG TTAC CTAATAGGCTTAGATAAAGACTCATG GTAAAACAAAGATGG TERM 4486 3855378 - 3855352 - R 100 -16.6 -4.67048 | overlap 3855354 TCATGGTAAAACAAA GATGGAGCCGCA TAA TGCGGCTCCAAC AAGCAACGATTACAA TERM 4487 3855376 - 3855354 - R 100 -17.8 -3.94471 | overlap 3855352 ATGGTAAAACAAAGA TGGAGCCGCA TAA TGCGGCTCCA ACAAGCAACGATTAC Shew185_3231 3856255 - 3855398 - | nucleoside-specific channel-forming protein Tsx TERM 4488 3856278 - 3856297 + r 73 -5.7 -4.52873 | overlap 3856279 CCCATTTATCTTGTT TGCTACC ATCGAG GGTAGCG TTCTTTTTGTGGCGC Shew185_3232 3857867 - 3856608 - | nucleoside transporter Shew185_3233 3858808 - 3858044 - | TatD-related deoxyribonuclease TERM 4489 3858076 - 3858103 + g 100 -12.2 -5.75342 | opp_overlap 3858080 GCACTGCATTCGACA TCAAGTGTTCTG ATAT TAGAACACTTGA TTTTTTTTGCAAAGC Shew185_3234 3859022 - 3858819 - | hypothetical protein TERM 4490 3859083 - 3859064 - R 100 -13.6 -5.05601 | opp_overlap 3859064 CATTAGATACAAAAA TGGCGGTG AATT CACCGCCA TTTCAACAACTATTC TERM 4491 3859064 - 3859083 + r 95 -13.6 -3.55548 | opp_overlap 3859064 CATTAGATACAAAAA TGGCGGTG AATT CACCGCCA TTTCAACAACTATTC Shew185_3235 3860684 - 3859113 - | peptide chain release factor 3 TERM 4492 3861210 - 3861228 + r 100 -12.4 -6.14618 | opp_overlap 3861210 CGGCGGTGAACGTAA GCCCTAGC TAT GCTGGGGC TTTTTTTATTTTCTA TERM 4493 3861228 - 3861210 - R 75 -10.2 -3.17075 | opp_overlap 3861210 CGGCGGTGAACGTAA GCCCTAGC TAT GCTGGGGC TTTTTTTATTTTCTA TERM 4494 3864258 - 3864295 + r 77 -9.9 -3.51934 | opp_overlap 3864274, overlap 3864256 AAGCCGCCTGTGCGG CGGTGAACCCGCAATAC CAAT GTATTTGGTGTTCACCG TATTTCTAAGCCGCC TERM 4495 3864496 - 3864451 - R 70 -9.9 -2.63073 | gap 1, overlap 3864418 3864448 GGCGGTGAACAACAT CGCACCAGGCGGGTCAAAAA CTCACTT TTTCTAAGCCGCCT-GTGCG GCGGTGAACCTTACC Shew185_3236 3866541 - 3865957 - | CRISPR-associated Csy4 family protein Shew185_3237 3867534 - 3866551 - | CRISPR-associated Csy3 family protein TERM 4496 3867362 - 3867372 + g 80 -8.2 -4.33165 | TTTGCGGGATCGTTT GCCG TTG CGGC TTTTAATCGGTTTGA Shew185_3238 3868550 - 3867555 - | CRISPR-associated Csy2 family protein Shew185_3239 3869913 - 3868552 - | CRISPR-associated Csy1 family protein TERM 4497 3868996 - 3868976 - G 75 -6.1 -4.64334 | overlap 3868977 3868978 3868990 AATTCGCGAATAAAA CCTGCGGTT TTA AACCGCAAT TGGCGGCTAAAAATA TERM 4498 3868995 - 3868977 - G 73 -9.6 -3.37877 | overlap 3868976 3868978 3868990 ATTCGCGAATAAAAC CTGCGGTT TTA AACCGCAA TTGGCGGCTAAAAAT TERM 4499 3868994 - 3868978 - G 72 -10.9 -2.62244 | overlap 3868977 3868976 3868990 TTCGCGAATAAAACC TGCGGTT TTA AACCGCA ATTGGCGGCTAAAAA Shew185_3240 3873284 - 3869904 - | CRISPR-associated helicase Cas3 family protein TERM 4500 3871371 - 3871357 - G 83 -10 -4.25104 | TGCGCCTGATTAAAA TGCTGG CGG CCAGCA TGATAGGCATCAAAT Shew185_3241 3874274 - 3873297 - | CRISPR-associated Cas1 family protein TERM 4501 3874018 - 3874004 - G 91 -11.4 -4.05033 | CGCAGGTCATATAAA GTGGCG TGC CGCCAC CGCCACAAAAGCCGA TERM 4502 3875170 - 3875145 - H 72 -3.3 -5.14563 | gap 1, overlap 3875146 3875147 GGCCGCATCAAAAAA CG-GTTGAACCA TAT TGGTGCAACACA CTGAACAACACCCAT TERM 4503 3875507 - 3875465 - H 100 -17.9 -4.90918 | gap 1, opp_overlap 3875478 ACAAAAGCAACAAAA GCGAGCCGTTGCATC-CTCC TCTA GGATTGATGCAACGACTCGC CTGTAGCCCTACTGC TERM 4504 3876890 - 3876901 + H 70 -3 -5.16151 | ACGAAAAAGGATGCT TATG CTCT CATA TTTTTATTACATTTG TERM 4505 3877091 - 3877081 - g 80 -2.6 -5.40474 | ATGGTTTGAAAAAAA TAAA AAG TTTA GAAGCCTTCAAATCA TERM 4506 3879136 - 3879124 - g 71 -4.8 -4.56093 | opp_overlap 3879124 AAGGCAATGAGAAAA CCTC GCATA GAGG TTCGTTTACTTTTGC Shew185_3242 3876969 - 3880292 + | hypothetical protein Shew185_3243 3880305 - 3880745 + | response regulator receiver protein Shew185_3244 3880746 - 3881906 + | response regulator receiver protein Shew185_3245 3882231 - 3883046 + | hypothetical protein TERM 4507 3883281 - 3883291 + G 80 -6.8 -4.75776 | opp_overlap 3883281 3883280 CATTATGCGTACAAT GCCA ATT TGGC TTTTTCAATTGAGTT Shew185_3246 3883170 - 3883652 + | hypothetical protein TERM 4508 3883680 - 3883701 + F 71 -3.7 -5.00267 | AAGAGGAACCTCCTG CGCATGGTA TTAG TGTTATGCG TTTATTTTTGTGGTT TERM 4509 3883856 - 3883881 + F 100 -7.6 -5.86332 | AAACAGACCCATTTC GCCCCGTT TCTTCCTTTC AACGGGGC TTTTTTTTGCCTTAG TERM 4510 3884294 - 3884242 - f 75 -8.1 -4.0641 | opp_overlap 3884246, overlap 3884246 TTGTATTCATACAAA TTAACATCGTATTAGTTGTAATT AATAGCA AATAACAACTAATATGATGTTTA TGAGTAAAAGATAAC TERM 4511 3884246 - 3884290 + F 86 -11.1 -3.91897 | opp_overlap 3884242 3884246 ATTCATACAAATTAA CATCGTATTAGTTGTAATT AATAGCA AATAACAACTAATATGATG TTTATGAGTAAAAGA TERM 4512 3884290 - 3884246 - f 76 -8.9 -3.65696 | opp_overlap 3884246, overlap 3884242 ATTCATACAAATTAA CATCGTATTAGTTGTAATT AATAGCA AATAACAACTAATATGATG TTTATGAGTAAAAGA Shew185_3247 3884322 - 3884669 + | XRE family transcriptional regulator Shew185_3248 3884666 - 3885928 + | HipA domain-containing protein Shew185_3249 3886936 - 3886226 - | hypothetical protein TERM 4513 3886469 - 3886455 - G 73 -5.6 -4.57569 | CCAGCTTCTGAAAAA GGCGTC GTA GACTCC ACCTTTTGAAAAATA Shew185_3250 3887653 - 3887042 - | hypothetical protein Shew185_3251 3888591 - 3887653 - | hypothetical protein TERM 4514 3889278 - 3889293 + r 72 -10.4 -2.6953 | overlap 3889277 3889285 3889288 CCGGCTAACCCGCCA GCCCTC GTAA GAGGGC GTTCCTTCTAATTCA Shew185_3252 3889660 - 3889301 - | hypothetical protein Shew185_3253 3889865 - 3889650 - | XRE family transcriptional regulator Shew185_3254 3891182 - 3889914 - | phage integrase family protein TERM 4515 3890304 - 3890268 - G 75 -3.6 -5.06414 | gap 1, opp_overlap 3890272 GCCTGGGAACAAAAA CGCCCGCTTGC-CCACA TGCG TGTATTGCCAGTGGGCG TAATGGGTGATGAGT Shew185_3255 3891407 - 3891183 - | hypothetical protein Shew185_3256 3892080 - 3891397 - | replication P family protein Shew185_3257 3892913 - 3892077 - | putative replication protein Shew185_3258 3893809 - 3893057 - | hypothetical protein Shew185_3259 3894299 - 3893973 - | hypothetical protein Shew185_3260 3894928 - 3894305 - | hypothetical protein Shew185_3261 3895251 - 3894925 - | hypothetical protein TERM 4516 3895351 - 3895372 + H 74 -3.8 -5.0133 | gap 1 TTGCCTTTTCAATTC GTTTC-GCA TTTTC TGCTGAAAC TTTTTTCCGGCCATG TERM 4517 3895870 - 3895858 - g 73 -7.7 -4.08279 | opp_overlap 3895858 ATACCCGAGAAAGAA GAGTG GGG CACTC TTGATGCCTGGGATG Shew185_3262 3895597 - 3896322 + | putative phage repressor TERM 4518 3896361 - 3896385 + F 100 -15.9 -3.55761 | opp_overlap 3896361 3896368, overlap 3896368 TAACTGATTATATAA TACAAAACCGC TAT GCGGTTTTGTA TTTCCCCGCTGACTA TERM 4519 3896385 - 3896361 - f 100 -15.9 -3.56161 | opp_overlap 3896361 3896368, overlap 3896368 TAACTGATTATATAA TACAAAACCGC TAT GCGGTTTTGTA TTTCCCCGCTGACTA TERM 4520 3896368 - 3896378 + F 84 -8.2 -4.78848 | opp_overlap 3896361 3896368, overlap 3896361 TTATATAATACAAAA CCGC TAT GCGG TTTTGTATTTCCCCG TERM 4521 3896378 - 3896368 - f 84 -8.2 -4.76963 | opp_overlap 3896368 3896361, overlap 3896361 TTATATAATACAAAA CCGC TAT GCGG TTTTGTATTTCCCCG TERM 4522 3896512 - 3896541 + F 72 -8.7 -3.57462 | opp_overlap 3896510 3896512, overlap 3896514 AAACCCCAATTAATA TGCCCAAAGCAAT ATTT ATTACTTTGGGTA TTTACACATCAAATA TERM 4523 3896514 - 3896539 + F 72 -9.1 -3.36515 | opp_overlap 3896512 3896510, overlap 3896512 ACCCCAATTAATATG CCCAAAGCAAT ATTT ATTACTTTGGG TATTTACACATCAAA Shew185_3263 3896672 - 3897034 + | hypothetical protein Shew185_3264 3897161 - 3897508 + | hypothetical protein Shew185_3265 3897539 - 3898168 + | hypothetical protein Shew185_3266 3898165 - 3898554 + | hypothetical protein Shew185_3267 3898533 - 3898829 + | hypothetical protein Shew185_3268 3898830 - 3899108 + | hypothetical protein Shew185_3269 3899105 - 3899335 + | hypothetical protein Shew185_3270 3899332 - 3899940 + | hypothetical protein Shew185_3271 3899937 - 3900257 + | GP46 Shew185_3272 3900254 - 3900379 + | hypothetical protein Shew185_3273 3901814 - 3900609 - | phage integrase family protein TERM 4524 3902122 - 3902105 - R 79 -6.9 -4.60487 | opp_overlap 3902105 TAGTATCGCTAAAAA GGCGCAA ATTA TAGCGCC TCAGTTCGAGCTTGG TERM 4525 3902165 - 3902147 - R 89 -11.7 -3.64703 | GCTTGGCTAGGCAAA GCCCGAG AAGAG CTCGGGC AGATGAGGGTTATTT Shew185_3274 3903077 - 3902175 - | lipoprotein NlpI TERM 4526 3903201 - 3903218 + r 89 -9.9 -4.26903 | opp_overlap 3903201 GCCAAAAACAAAAAA GGAGATC ATTT GATCTCC TTTTGATGCAATCAC TERM 4527 3903218 - 3903201 - R 100 -9.9 -5.93252 | opp_overlap 3903201 GCCAAAAACAAAAAA GGAGATC ATTT GATCTCC TTTTGATGCAATCAC Shew185_3275 3905372 - 3903270 - | polynucleotide phosphorylase/polyadenylase TERM 4528 3905164 - 3905176 + g 87 -5.5 -5.52023 | opp_overlap 3905153 3905150 CCACCAGGAATTTTA CCTGC TGC GTAGG TTTTTTCTTGATAGT Shew185_3276 3905568 - 3907622 + | diguanylate cyclase/phosphodiesterase TERM 4529 3907775 - 3907746 - T 95 -14.5 -3.07994 | opp_overlap 3907753, overlap 3907753 CTGAATTTTAGGCAA TAAAAAAGGAGGC TTAA GCCTCCTTTTTCA CGTTAGTCGACGCGA TERM 4530 3907768 - 3907753 - T 100 -10.4 -5.4833 | opp_overlap 3907753, overlap 3907746 TTAGGCAATAAAAAA GGAGGC TTAA GCCTCC TTTTTCACGTTAGTC TERM 4531 3907753 - 3907768 + T 93 -10.4 -4.67904 | opp_overlap 3907753 3907746 TTAGGCAATAAAAAA GGAGGC TTAA GCCTCC TTTTTCACGTTAGTC Shew185_3277 3908062 - 3907793 - | 30S ribosomal protein S15 Shew185_3278 3909176 - 3908211 - | tRNA pseudouridine synthase B TERM 4532 3908868 - 3908842 - G 75 -8 -4.21974 | opp_overlap 3908846, overlap 3908846 TCACCACGGAAGAAA TCAAGCGCGGTT AAT AACTGCGCTTCA GTAAAATCAATGGCG TERM 4533 3908864 - 3908846 - G 71 -8.8 -3.69809 | opp_overlap 3908846, overlap 3908842 CACGGAAGAAATCAA GCGCGGTT AAT AACTGCGC TTCAGTAAAATCAAT TERM 4534 3908846 - 3908864 + g 74 -11 -3.06915 | opp_overlap 3908842 3908846 CACGGAAGAAATCAA GCGCGGTT AAT AACTGCGC TTCAGTAAAATCAAT Shew185_3279 3909649 - 3909176 - | ribosome-binding factor A TERM 4535 3909689 - 3909658 - R 88 -11.6 -3.64599 | opp_overlap 3909659 3909662 3909665, overlap 3909659 3909662 3909665 TTACCATAGCTTAAA TTGATAAGGGCGGC TAAA GCCGCCCTTATTAT CGTTACAGAGTACGA TERM 4536 3909688 - 3909659 - R 95 -15.1 -2.78438 | opp_overlap 3909659 3909662 3909665, overlap 3909658 3909662 3909665 TACCATAGCTTAAAT TGATAAGGGCGGC TAAA GCCGCCCTTATTA TCGTTACAGAGTACG TERM 4537 3909659 - 3909688 + r 100 -17.3 -2.71731 | opp_overlap 3909659 3909658 3909662 3909665, overlap 3909662 3909665 TACCATAGCTTAAAT TGATAAGGGCGGC TAAA GCCGCCCTTATTA TCGTTACAGAGTACG TERM 4538 3909685 - 3909662 - R 100 -16.8 -2.6583 | opp_overlap 3909659 3909662 3909665, overlap 3909659 3909658 3909665 CATAGCTTAAATTGA TAAGGGCGGC TAAA GCCGCCCTTA TTATCGTTACAGAGT TERM 4539 3909662 - 3909685 + r 100 -16.8 -3.51032 | opp_overlap 3909662 3909659 3909658 3909665, overlap 3909659 3909665 CATAGCTTAAATTGA TAAGGGCGGC TAAA GCCGCCCTTA TTATCGTTACAGAGT TERM 4540 3909665 - 3909682 + r 100 -14.1 -3.8917 | opp_overlap 3909665 3909662 3909659 3909658, overlap 3909662 3909659 AGCTTAAATTGATAA GGGCGGC TAAA GCCGCCC TTATTATCGTTACAG TERM 4541 3909682 - 3909665 - R 100 -14.1 -3.47617 | opp_overlap 3909662 3909659 3909665, overlap 3909662 3909659 3909658 AGCTTAAATTGATAA GGGCGGC TAAA GCCGCCC TTATTATCGTTACAG Shew185_3280 3912334 - 3909692 - | translation initiation factor IF-2 TERM 4542 3910319 - 3910334 + g 72 -6.2 -4.47551 | CACTTCGCCTTCAGT CATGTT CGCG AACATG TTTTCTAGCTTAGAT TERM 4543 3910338 - 3910348 + g 71 -4 -4.7373 | TTCGCGAACATGTTT TCTA GCT TAGA TTTTTGCTGGCGTGC TERM 4544 3911577 - 3911593 + g 73 -2.1 -5.1356 | GCGTTGCTCTTGTTA CGAGCAC GAC GTCCGCG TTTTTCTTCATCCAG TERM 4545 3911655 - 3911666 + g 70 -2.2 -4.88388 | overlap 3911649 TTAGAAGTCGTGATG TGGT GATC ACCG TTTTTCTCGGCTTCT TERM 4546 3911948 - 3911972 + g 83 -9.9 -4.19735 | overlap 3911947 3911949 AGCTTTCGCTTTTAC TGCCGCAGCAG CTT CTGCTTCGGCC TTTGCTTTTGCCAAA TERM 4547 3911949 - 3911971 + g 88 -13.4 -3.11359 | overlap 3911947 3911948 GCTTTCGCTTTTACT GCCGCAGCAG CTT CTGCTTCGGC CTTTGCTTTTGCCAA Shew185_3281 3913859 - 3912360 - | transcription elongation factor NusA Shew185_3282 3914344 - 3913889 - | hypothetical protein TERM 4548 3914383 - 3914370 - R 100 -8.1 -6.04324 | CGAAAAAACAAAAAA GGGCT TAAT AGCCC TAGTACAACGCCACA TERM 4549 3914457 - 3914442 - R 100 -6.8 -5.60689 | opp_overlap 3914442 3914447 CCAGATAACAAAAAA CCCCGT AATC ACGAGG TCATTAATTTCAAGA TERM 4550 3914778 - 3914799 + r 70 -5.9 -4.32201 | overlap 3914795 CGACACCTTTTACTA GTCAGGAAT TTTC GTTTCTGAC TTTTCGGTTCCTTGC Shew185_3283 3915110 - 3914775 - | preprotein translocase subunit SecG Shew185_3284 3915894 - 3915112 - | Triose-phosphate isomerase Shew185_3285 3917426 - 3916089 - | phosphoglucosamine mutase TERM 4551 3916611 - 3916591 - G 71 -10.3 -2.90571 | opp_overlap 3916590 3916589, overlap 3916578 AAGGTGCCAACCACA CCGCCGCGC AAT ACGCCGCGG GATTTCGCATCACAG Shew185_3286 3918340 - 3917507 - | dihydropteroate synthase Shew185_3287 3918529 - 3918681 + | hypothetical protein TERM 4552 3918815 - 3918787 - T 93 -10.4 -4.79752 | opp_overlap 3918790 3918795, overlap 3918790 3918795 GCTAACAAGATAAAA CAAGAAAACCCC TTTAC GGGGTTTTCTTT TATCTCACAACAAAT TERM 4553 3918812 - 3918790 - T 95 -12.1 -4.47977 | opp_overlap 3918790 3918795, overlap 3918787 3918795 AACAAGATAAAACAA GAAAACCCC TTTAC GGGGTTTTC TTTTATCTCACAACA TERM 4554 3918790 - 3918812 + T 95 -12.1 -4.52589 | opp_overlap 3918790 3918787 3918795, overlap 3918795 AACAAGATAAAACAA GAAAACCCC TTTAC GGGGTTTTC TTTTATCTCACAACA TERM 4555 3918807 - 3918795 - T 83 -6.2 -5.12916 | opp_overlap 3918790 3918795, overlap 3918790 3918787 GATAAAACAAGAAAA CCCC TTTAC GGGG TTTTCTTTTATCTCA TERM 4556 3918795 - 3918807 + T 87 -6.2 -5.23292 | opp_overlap 3918795 3918790 3918787, overlap 3918790 GATAAAACAAGAAAA CCCC TTTAC GGGG TTTTCTTTTATCTCA Shew185_3288 3920803 - 3918830 - | ATP-dependent metalloprotease FtsH TERM 4557 3920470 - 3920488 + g 71 -8.2 -3.70751 | opp_overlap 3920470 3920472, overlap 3920453 ACCAAGAGATGAAAA TTTGGGTT AGG AACCCAGA TTCTTCGGCTTCTTG TERM 4558 3920488 - 3920470 - G 72 -6 -4.43815 | opp_overlap 3920470 3920453, overlap 3920472 ACCAAGAGATGAAAA TTTGGGTT AGG AACCCAGA TTCTTCGGCTTCTTG Shew185_3289 3921462 - 3920833 - | 23S rRNA methyltransferase J TERM 4559 3921748 - 3921732 - g 82 -5.1 -5.14477 | CAGAGAGCTAAAAAA TGCCATC GTT GATGCCA TAGTACGTGAAACTC Shew185_3290 3921553 - 3921852 + | hypothetical protein TERM 4560 3921852 - 3921830 - T 72 -9.2 -3.38986 | opp_overlap 3921830, overlap 3921828 CACCAGAAATGAAGA TTGCTTTGCC AAA GGCAAAGTAA TTTTTCTTGATTTTT TERM 4561 3921830 - 3921852 + T 100 -11.4 -5.30199 | opp_overlap 3921828 3921830 CACCAGAAATGAAGA TTGCTTTGCC AAA GGCAAAGTAA TTTTTCTTGATTTTT TERM 4562 3921878 - 3921909 + T 100 -21.8 -4.73388 | opp_overlap 3921882, overlap 3921882 TTTTTATTGTGTTAA CAAAGAGGCCACTC AATT GAGTGGCCTCTTTG TTTTTACTACAAATT TERM 4563 3921882 - 3921905 + T 100 -16.8 -4.91852 | opp_overlap 3921882, overlap 3921878 TATTGTGTTAACAAA GAGGCCACTC AATT GAGTGGCCTC TTTGTTTTTACTACA TERM 4564 3921905 - 3921882 - T 100 -16.8 -4.1552 | opp_overlap 3921882 3921878 TATTGTGTTAACAAA GAGGCCACTC AATT GAGTGGCCTC TTTGTTTTTACTACA Shew185_3291 3922838 - 3921936 - | preprotein translocase subunit SecF TERM 4565 3922357 - 3922326 - G 74 -3 -5.0538 | gap 1 CGTCAGCGCAAAAAA CGCCAGCACA-AACA CAA CGTCGTGCACTAGCG CAAACAAAGCACCCG TERM 4566 3922669 - 3922681 + g 74 -4.1 -4.9725 | AGCAAAGGTTGTAAC TCACT GCT GGTGA TTTTTCTATCGAGCT Shew185_3292 3924655 - 3922841 - | preprotein translocase subunit SecD TERM 4567 3924358 - 3924387 + g 72 -5.7 -4.36596 | CTTTTGGCTCTGTCA CCATAGACGAAAC CAAG GTTTTGACTAAGG TTTGTTGGTTATCCG Shew185_3293 3925505 - 3924882 - | hypothetical protein TERM 4568 3925838 - 3925851 + r 86 -9.5 -4.07568 | opp_overlap 3925838 GCAGAAAACAAAAAA CCGCC CTAG GGCGG TTTTAGAACGAGCGA TERM 4569 3925851 - 3925838 - R 100 -9.5 -5.86976 | opp_overlap 3925838 GCAGAAAACAAAAAA CCGCC CTAG GGCGG TTTTAGAACGAGCGA Shew185_3294 3926397 - 3925921 - | transcription elongation factor GreA TERM 4570 3926674 - 3926647 - R 70 -2.6 -5.0916 | gap 1, opp_overlap 3926647 TTTTGAATACAAAAA TGCCCAC-TCGCC GTT GAGGTTGTGGGCA TTTAACGGTGAACGT Shew185_3295 3927583 - 3926765 - | hypothetical protein TERM 4571 3927024 - 3927011 - G 77 -6.7 -4.55295 | opp_overlap 3927011 3927010 GCCGTCATAAACAAA CTGCA GTGT TGCAG GTTCGTTTTCAACGA TERM 4572 3927658 - 3927625 - R 72 -9.7 -3.07895 | gap 1 TGTACGGGCAATATA TTCAGTAGCA-GGCTC AGC GAGCCATGCCACTTAA GCGTATGTCGATAAC Shew185_3296 3928150 - 3927638 - | lysozyme Shew185_3297 3928847 - 3928167 - | PepSY-associated TM helix domain-containing protein TERM 4573 3929599 - 3929589 - g 73 -8.2 -3.91911 | opp_overlap 3929589 3929588 GTCATGCTAATGAAA GGCG GCG CGCC CTTAGTGATCTCTGA TERM 4574 3929713 - 3929703 - g 79 -3.2 -5.21236 | AAGTTACAACAAAAA GCCT TAG AAGC GGGTGCGAACCAAGT Shew185_3298 3929235 - 3929930 + | hypothetical protein TERM 4575 3929938 - 3929970 + T 70 -9.2 -3.16981 | opp_overlap 3929935 3929931 3929958, overlap 3929940 3929965 AGCAATAACACAGCT CACCACAGTGCC TAATCAACT GGCACTGTGGTA TTCACTGTCGTTATA TERM 4576 3929940 - 3929968 + T 83 -11.8 -3.14013 | opp_overlap 3929935 3929931 3929958, overlap 3929938 3929965 CAATAACACAGCTCA CCACAGTGCC TAATCAACT GGCACTGTGG TATTCACTGTCGTTA TERM 4577 3930409 - 3930380 - T 95 -14.5 -3.02984 | opp_overlap 3930386, overlap 3930386 TGAAAAGCTAGAAAG CAAAAAGCCTGTC CGAA GACAGGCTTTTTA ACTTTTGGCTGGGGT TERM 4578 3930403 - 3930386 - T 95 -11.3 -5.04601 | opp_overlap 3930386, overlap 3930380 GCTAGAAAGCAAAAA GCCTGTC CGAA GACAGGC TTTTTAACTTTTGGC TERM 4579 3930386 - 3930403 + T 95 -11.3 -4.87318 | opp_overlap 3930386 3930380 GCTAGAAAGCAAAAA GCCTGTC CGAA GACAGGC TTTTTAACTTTTGGC Shew185_3299 3932572 - 3931481 - | translation-associated GTPase TERM 4580 3932051 - 3932070 + g 77 -2.8 -5.33785 | opp_overlap 3932063, overlap 3932053 GCGCAGCATTTTCGC TTCGTCTA GAAT TGGACGCA TTTTTTCTAATACTT Shew185_3300 3933288 - 3932701 - | peptidyl-tRNA hydrolase Shew185_3301 3934748 - 3933441 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Shew185_3302 3935155 - 3935580 + | hypothetical protein TERM 4581 3935726 - 3935706 - g 71 -9.1 -3.53012 | opp_overlap 3935720 CTTGGGGCTGTCAAA TGAATGAGT ATG ACTCATCCA AGATGGCTGATCTGT Shew185_3303 3935666 - 3937090 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 4582 3937143 - 3937127 - f 100 -13.7 -4.15698 | opp_overlap 3937127 TACCTATATAAAGAA GGGCGAC TTA GTCGCCC TTTTGCTTTCACGCA TERM 4583 3937127 - 3937143 + F 100 -13.7 -4.54727 | opp_overlap 3937127 TACCTATATAAAGAA GGGCGAC TTA GTCGCCC TTTTGCTTTCACGCA Shew185_3304 3937293 - 3938339 + | PhoH family protein Shew185_3305 3938329 - 3938790 + | putative metalloprotease Shew185_3306 3938831 - 3939706 + | CBS domain-containing protein TERM 4584 3939754 - 3939726 - g 77 -6.7 -4.64861 | overlap 3939727 3939728 TCGTGCTAAAACAAA TCCGGGCTTTTGC CCA ACAAAAGTCCCGA CCTAGTGCTTTGAGA TERM 4585 3939792 - 3939806 + G 76 -8.5 -4.06055 | overlap 3939799 3939802 TGGCATTTGCCCTTG GCGCC AGTAC GGCGC TTTCATTTGCGCCCT TERM 4586 3940910 - 3940899 - g 72 -5.8 -4.4009 | opp_overlap 3940899 CCCTAGGCCATAAAA TCGC GCCC GCGA TTTGTTATGAAATTG TERM 4587 3940899 - 3940910 + G 72 -5.8 -4.33248 | opp_overlap 3940899 CCCTAGGCCATAAAA TCGC GCCC GCGA TTTGTTATGAAATTG Shew185_3307 3939713 - 3941287 + | apolipoprotein N-acyltransferase Shew185_3308 3941298 - 3941801 + | methylation site containing protein Shew185_3309 3941995 - 3942654 + | histidine kinase TERM 4588 3942710 - 3942725 + T 86 -10.4 -4.08767 | opp_overlap 3942710 TTGATCAAAAAAAAA CGACGC AGAT GCGTCG TTTTAACGAAATAAG TERM 4589 3942725 - 3942710 - T 100 -10.4 -6.15828 | opp_overlap 3942710 TTGATCAAAAAAAAA CGACGC AGAT GCGTCG TTTTAACGAAATAAG Shew185_3310 3943254 - 3942754 - | hypothetical protein TERM 4590 3943721 - 3943705 - g 70 -7.9 -3.82807 | opp_overlap 3943705 3943704 AGAATACATGAAGAA CCAGCTG AAA CTGCTGG GTTTTGGTTACGATT TERM 4591 3943843 - 3943831 - g 73 -3.3 -4.85599 | overlap 3943833 CCTAGTCTACAAAAA GACAG CTT CAGTC AACTGGTGTCCAAAC Shew185_3311 3943331 - 3945955 + | leucyl-tRNA synthetase TERM 4592 3946019 - 3945984 - f 79 -9.8 -3.70902 | gap 1, overlap 3945989 3945993 CTCGCTATACTCAAA GCCAATGAAGTTGCAGC ATA GCTGCAACTTCAA-GTC AGCAGGGTATACCAC TERM 4593 3946015 - 3945989 - f 100 -18.2 -3.30038 | overlap 3945984 3945993 TATACTCAAAGCCAA TGAAGTTGCAGC ATA GCTGCAACTTCA AGTCAGCAGGGTATA TERM 4594 3946011 - 3945993 - f 93 -13.2 -3.43217 | overlap 3945989 3945984 CTCAAAGCCAATGAA GTTGCAGC ATA GCTGCAAC TTCAAGTCAGCAGGG Shew185_3312 3946056 - 3946550 + | rare lipoprotein B TERM 4595 3946766 - 3946780 + G 73 -7.1 -4.13945 | TTGACTCAGGAATGG CAGGC CATGA GCCTG TTTTCCAGTAAGCGT Shew185_3313 3946568 - 3947599 + | DNA polymerase III, delta subunit Shew185_3314 3947624 - 3948274 + | nicotinate (nicotinamide) nucleotide adenylyltransferase Shew185_3315 3948367 - 3948711 + | iojap-like protein TERM 4596 3948840 - 3948825 - g 75 -10.4 -3.41073 | overlap 3948823 GAGCTCATCGAAATA CCCGCT GGAA AGCGGG GGAAAAATGCCGACA Shew185_3316 3948711 - 3949181 + | SPOUT methyltransferase superfamily protein Shew185_3317 3949243 - 3951099 + | peptidoglycan glycosyltransferase Shew185_3318 3951096 - 3952202 + | rod shape-determining protein RodA Shew185_3319 3952219 - 3953289 + | lytic murein transglycosylase B Shew185_3320 3953273 - 3954106 + | rare lipoprotein A Shew185_3321 3954248 - 3955423 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 4597 3955462 - 3955439 - f 100 -14 -4.09108 | opp_overlap 3955439, overlap 3955443 GCTAAGTCACATAAA TAAAGCCACC TTCG GGTGGCTTTA TTTTTTTGGGGAGTG TERM 4598 3955439 - 3955462 + F 100 -14 -5.41143 | opp_overlap 3955439 3955443 GCTAAGTCACATAAA TAAAGCCACC TTCG GGTGGCTTTA TTTTTTTGGGGAGTG TERM 4599 3955458 - 3955443 - f 91 -10.4 -4.63044 | opp_overlap 3955439, overlap 3955439 AGTCACATAAATAAA GCCACC TTCG GGTGGC TTTATTTTTTTGGGG Shew185_3322 3955545 - 3955811 + | hypothetical protein Shew185_3323 3955904 - 3956557 + | lipoate-protein ligase B Shew185_3324 3956554 - 3957519 + | lipoyl synthase TERM 4600 3957597 - 3957641 + T 100 -11 -5.28176 | gap 1, opp_overlap 3957612, overlap 3957598 3957612 ATAGAGTTCAGGGTT ATCCAAATAAAAAAACAGCGC TTAA GCGCTGTTTTTTT-TATGGAA TTTTTTATGACTGCC TERM 4601 3957598 - 3957640 + T 100 -14.5 -3.76182 | gap 1, opp_overlap 3957612, overlap 3957597 3957612 TAGAGTTCAGGGTTA TCCAAATAAAAAAACAGCGC TTAA GCGCTGTTTTTTT-TATGGA ATTTTTTATGACTGC TERM 4602 3957612 - 3957627 + T 100 -10.4 -5.94713 | opp_overlap 3957612, overlap 3957598 3957597 ATCCAAATAAAAAAA CAGCGC TTAA GCGCTG TTTTTTTTATGGAAT TERM 4603 3957627 - 3957612 - T 100 -10.4 -5.96894 | opp_overlap 3957612 3957598 3957597 ATCCAAATAAAAAAA CAGCGC TTAA GCGCTG TTTTTTTTATGGAAT Shew185_3325 3958262 - 3957714 - | ribosomal-protein-alanine acetyltransferase Shew185_3326 3958676 - 3958311 - | hypothetical protein Shew185_3327 3958930 - 3959397 + | Ferritin Dps family protein TERM 4604 3959461 - 3959436 - T 100 -14.8 -5.85244 | opp_overlap 3959436 AACCAAAACAAAAAA GTCGCCAAGC GCTTAT GCTTGGCGAC TTTTTCTTCAAAGCG TERM 4605 3959436 - 3959461 + T 100 -15.5 -5.06414 | opp_overlap 3959436 AACCAAAACAAAAAA GTCGCCAAGCG CTTA TGCTTGGCGAC TTTTTCTTCAAAGCG Shew185_3328 3960867 - 3959554 - | hypothetical protein TERM 4606 3960507 - 3960487 - G 77 -4.5 -4.86621 | overlap 3960473 3960488 3960489 ACGTTTAATCAAAAA CGCCCGCGC TGA ACGCGGCAG TCCATGACTGCGATT Shew185_3329 3963019 - 3960857 - | TonB-dependent siderophore receptor TERM 4607 3962996 - 3962986 - G 77 -8.2 -4.25283 | overlap 3962973 AGGCGCCCAGCAAAA GCGC AAC GCGC TTGGGAATATAAAAA TERM 4608 3963071 - 3963043 - R 72 -9.5 -3.01888 | CGAAAATAAACAGCA TCCGCGCCTTAGC TAA GCCAAGGCGCTCA AAGTTAATTAAGATA Shew185_3330 3963395 - 3963105 - | hypothetical protein Shew185_3331 3964656 - 3963652 - | regulatory protein LacI Shew185_3332 3965972 - 3964683 - | major facilitator transporter TERM 4609 3965970 - 3965958 - G 73 -5.5 -4.58685 | opp_overlap 3965969, overlap 3965969 AAATGCCGCGAAAAA GCCTG CAC CAAGC ACCCATTGCAGGTGC TERM 4610 3965969 - 3965985 + g 73 -5.1 -4.58395 | opp_overlap 3965958 3965969 AAAAGCCTGCACCAA GCACC CATTGCA GGTGC TTTTTAGGCGCTAAA Shew185_3333 3968683 - 3966089 - | membrane or secreted protein Shew185_3334 3969724 - 3968696 - | UDP-glucose 4-epimerase Shew185_3335 3971291 - 3969729 - | SSS family solute/sodium (Na+) symporter Shew185_3336 3972561 - 3971332 - | galactokinase Shew185_3337 3973628 - 3972564 - | galactose-1-phosphate uridylyltransferase Shew185_3338 3975979 - 3973634 - | glycoside hydrolase family protein TERM 4611 3974223 - 3974244 + g 86 -12.3 -3.5393 | TTGTATTGGGTTGAC GTTAGCGCG GGGT CGCGCTGAC TTTGGAACAGGTAAT TERM 4612 3976061 - 3976040 - R 100 -18.7 -4.11363 | AACAATATGAAATAA GGCGCCCGC CTCG GCGGGCGCC CCAGTGACCATTACA Shew185_3339 3978837 - 3976072 - | TonB-dependent receptor TERM 4613 3979294 - 3979262 - R 77 -6.4 -4.52803 | gap 1, opp_overlap 3979268, overlap 3979268 TAGAAACTGAGAAAA GACAAAGGCCTAGCA TTTC TGCTAGGCCTTC-TA GAATTTGGCAGGGGT TERM 4614 3979289 - 3979268 - R 100 -14.5 -4.51238 | opp_overlap 3979268, overlap 3979262 CTGAGAAAAGACAAA GGCCTAGCA TTTC TGCTAGGCC TTCTAGAATTTGGCA TERM 4615 3979268 - 3979289 + r 100 -14.5 -3.39668 | opp_overlap 3979268 3979262 CTGAGAAAAGACAAA GGCCTAGCA TTTC TGCTAGGCC TTCTAGAATTTGGCA Shew185_3340 3980540 - 3979521 - | periplasmic binding protein Shew185_3341 3981319 - 3980537 - | ABC transporter related Shew185_3342 3982266 - 3981316 - | transport system permease protein TERM 4616 3981551 - 3981541 - G 73 -8.2 -3.89903 | AAATATCCCCATAAA GGCC GTA GGCC CTACTAAGCTGGTTG Shew185_3343 3983204 - 3982263 - | transport system permease protein Shew185_3344 3983987 - 3983277 - | hypothetical protein Shew185_3345 3986197 - 3984080 - | TonB-dependent receptor TERM 4617 3984696 - 3984718 + g 72 -10.6 -3.00923 | opp_overlap 3984690, overlap 3984690 GTAAAAAGTTCATAG TTCCATGCCG ACT CGGCATCGAA TGTATAATATTCGCC TERM 4618 3986297 - 3986271 - H 86 -10.4 -4.07885 | overlap 3986273 TATCGCCGTTCAAAA CATTTATCAACA CTA TGTTGATAAATA AAAATAACCGCTTAA TERM 4619 3986295 - 3986273 - H 83 -10.8 -3.63744 | overlap 3986271 TCGCCGTTCAAAACA TTTATCAACA CTA TGTTGATAAA TAAAAATAACCGCTT TERM 4620 3986318 - 3986334 + H 72 -8.7 -3.49077 | opp_overlap 3986305, overlap 3986315 AACCGCTTAATATGG TCGCCAT CTC ATGGCGG TTCAATTTTTATGAA Shew185_3346 3986517 - 3988115 + | ABC transporter related Shew185_3347 3988112 - 3989674 + | ABC transporter related Shew185_3348 3992741 - 3991848 - | LysR family transcriptional regulator Shew185_3349 3992843 - 3993685 + | alpha/beta hydrolase fold TERM 4621 3993843 - 3993868 + F 100 -7.6 -5.53288 | AAACAGACCCATTTC GCCCCGTT TCTTCCTTTC AACGGGGC TTTTTTTGCCTTAGC Shew185_3350 3994310 - 3994657 + | XRE family transcriptional regulator TERM 4622 3995717 - 3995700 - g 77 -4.1 -5.12172 | overlap 3995701 CATGAATAAACAAAA GCTATGG TACG CCATAGA TATCGCGACCTTCCA Shew185_3351 3994654 - 3995916 + | HipA domain-containing protein Shew185_3352 3996574 - 3996062 - | NUDIX hydrolase Shew185_3353 3997132 - 3996695 - | GCN5-related N-acetyltransferase TERM 4623 3997683 - 3997699 + r 85 -9.3 -4.18164 | overlap 3997684 AATTGTTGCGAGTCC AGCGGCC GCA GGCCGCG TTGTTTTAGGCGCTT TERM 4624 3997684 - 3997698 + r 85 -12.8 -3.10175 | overlap 3997683 ATTGTTGCGAGTCCA GCGGCC GCA GGCCGC GTTGTTTTAGGCGCT Shew185_3354 3998091 - 3997729 - | hypothetical protein TERM 4625 3998120 - 3998147 + r 86 -9.8 -4.0802 | gap 1, opp_overlap 3998121, overlap 3998121 TCGTATAACGCCCAA AGCAGCTG-CGCG GTA CGCGTCGGCTGCC TTTGCTTGTTAGCAT TERM 4626 3998121 - 3998146 + r 91 -13.3 -3.04089 | gap 1, opp_overlap 3998121, overlap 3998120 CGTATAACGCCCAAA GCAGCTG-CGCG GTA CGCGTCGGCTGC CTTTGCTTGTTAGCA TERM 4627 3998146 - 3998121 - R 83 -11.1 -3.62591 | gap 1, opp_overlap 3998121 3998120 CGTATAACGCCCAAA GCAGCTG-CGCG GTA CGCGTCGGCTGC CTTTGCTTGTTAGCA Shew185_3355 3998905 - 3998156 - | hypothetical protein Shew185_3356 3999375 - 3998995 - | hypothetical protein Shew185_3357 4000886 - 3999495 - | KAP P-loop domain-containing protein TERM 4628 4001032 - 4001021 - R 75 -5.8 -4.80882 | overlap 4001007 ACCGCATACCAAAAA TGCC ACGC GGCA TGAATCCCTCTTGAA Shew185_3358 4001344 - 4001075 - | hypothetical protein TERM 4629 4001230 - 4001216 - G 74 -2.8 -5.04868 | overlap 4001218 CCAAACGAAAGAAAA TACCAA ACC TTGGAA AGCTTCATAAGGCCA Shew185_3359 4002601 - 4001486 - | hypothetical protein TERM 4630 4002770 - 4002759 - H 81 -7.2 -4.60487 | opp_overlap 4002759, overlap 4002749 CACCATCTGGAAAAA CGCG CATG CGCG TTTCCCAAACCTATT Shew185_3360 4002938 - 4003897 + | integron integrase TERM 4631 4004244 - 4004259 + T 72 -10.4 -2.6953 | overlap 4004243 4004251 4004254 CCGGCTAACCCGCTA GCCCTC GTAA GAGGGC GTTCCTTCTAATTCA Shew185_3361 4004626 - 4004267 - | hypothetical protein Shew185_3362 4004831 - 4004616 - | XRE family transcriptional regulator Shew185_3363 4006172 - 4004904 - | phage integrase family protein Shew185_3364 4006397 - 4006173 - | hypothetical protein Shew185_3365 4007073 - 4006387 - | replication P family protein TERM 4632 4006739 - 4006699 - G 91 -13.4 -3.53811 | gap 1, opp_overlap 4006701 CGCAGCCTCCTTAAA CG-CGGCCTCTAACTTGGG CAAT CCCAAATCACAGGCCGTCG GTTGGCACCACAAAG Shew185_3366 4007906 - 4007070 - | putative replication protein Shew185_3367 4008824 - 4008057 - | hypothetical protein Shew185_3368 4009325 - 4008990 - | hypothetical protein Shew185_3369 4009945 - 4009322 - | hypothetical protein TERM 4633 4009687 - 4009673 - G 70 -7.8 -3.92324 | opp_overlap 4009680, overlap 4009677 4009680 TTGCTCAACATGAAA CAAGCG ATC CGCCTG CGGATGTTGACCCTC Shew185_3370 4010183 - 4009989 - | hypothetical protein TERM 4634 4010282 - 4010252 - H 75 -2.6 -5.27476 | opp_overlap 4010252 4010247, overlap 4010247 4010254 4010257 GTCAACAAAAGAAAA GGTAACTTGACTTA CGT TAAGTTAAGATAGC TTTACTATGATGAAT TERM 4635 4010375 - 4010361 - g 72 -5.7 -4.35085 | overlap 4010374 ATTGCCAAAAAAATA GGCTT AACTA AAGCC ACAGTATCGCTTTGG Shew185_3371 4010289 - 4010978 + | putative phage repressor Shew185_3372 4011971 - 4011165 - | hypothetical protein TERM 4636 4011420 - 4011436 + g 73 -2.3 -5.08015 | AGTCGCATATATTTG TTCAC TGTAATC GTGAA TTTGTTTTTTACATT TERM 4637 4011499 - 4011480 - G 88 -7.2 -5.12971 | overlap 4011481 AAGATTTAATAAAAA CGGCTTAT CAGT ATAAGCCA CTGAGCAATATCCGA TERM 4638 4011498 - 4011481 - G 71 -8.5 -3.66156 | overlap 4011480 AGATTTAATAAAAAC GGCTTAT CAGT ATAAGCC ACTGAGCAATATCCG Shew185_3373 4012571 - 4012086 - | hypothetical protein TERM 4639 4012634 - 4012658 + r 85 -2.7 -5.80727 | opp_overlap 4012641, overlap 4012635 GGATAAAAATGGTTG GTGACAATCGC AAA GCGATGGCCAA TTTTTTATTCTTTTT Shew185_3374 4013811 - 4012672 - | hypothetical protein TERM 4640 4013859 - 4013917 + r 70 -8.3 -3.27544 | gap 2, overlap 4013857 4013859 4013881 TAACACCCAGGACTG CGG-CTGGCAAAGCTGGCAC-GTATTTGC GTA GCAAATTTAGTGACAGGTTTGACAGTCCG TTACTGCTGCTTTTC Shew185_3375 4014719 - 4013931 - | hypothetical protein TERM 4641 4015226 - 4015203 - H 79 -11.2 -2.70525 | opp_overlap 4015203 4015206 4015223, overlap 4015202 4015198 4015206 4015223 GTTTTTTAAACCAAT TAACTTGACT CGGC AGTCAAGTTA TCTTAACTTTACACT TERM 4642 4015203 - 4015226 + H 82 -11.2 -3.20617 | opp_overlap 4015203 4015202 4015198 4015206 4015223, overlap 4015206 4015223 GTTTTTTAAACCAAT TAACTTGACT CGGC AGTCAAGTTA TCTTAACTTTACACT TERM 4643 4015223 - 4015206 - H 72 -8.5 -3.5013 | opp_overlap 4015203 4015206, overlap 4015203 4015202 4015198 TTTTAAACCAATTAA CTTGACT CGGC AGTCAAG TTATCTTAACTTTAC TERM 4644 4015206 - 4015223 + H 73 -8.5 -3.73873 | opp_overlap 4015206 4015203 4015202 4015198, overlap 4015203 TTTTAAACCAATTAA CTTGACT CGGC AGTCAAG TTATCTTAACTTTAC Shew185_3376 4015276 - 4015638 + | hypothetical protein TERM 4645 4015850 - 4015826 - g 81 -7.9 -4.59853 | gap 1 TCAAGCGGCCAAAAA GTGCAGCACC TCAGTC GGTGC-GCAC CCTAACCGCCGTCAA Shew185_3377 4015770 - 4016117 + | hypothetical protein Shew185_3378 4016148 - 4016441 + | hypothetical protein TERM 4646 4016540 - 4016558 + G 73 -10.2 -3.20164 | opp_overlap 4016540 4016539 CGACAGCATCAAAAT CGCGCTGG CAC TCGGCGCG TTAGATTGCCTGTAC Shew185_3379 4016442 - 4016720 + | hypothetical protein Shew185_3380 4016717 - 4016947 + | hypothetical protein Shew185_3381 4016944 - 4017552 + | hypothetical protein Shew185_3382 4017549 - 4017869 + | GP46 Shew185_3383 4017928 - 4018143 + | hypothetical protein Shew185_3384 4018136 - 4019152 + | phage integrase family protein TERM 4647 4019207 - 4019238 + F 93 -10.2 -4.86731 | opp_overlap 4019210, overlap 4019210 ATTCTACGCAAAATA AAACGGCTCGCATA TTTC TATGCAAGCCGTTG TTTTATTTGGCAGGG TERM 4648 4019210 - 4019235 + F 95 -11.9 -4.54026 | opp_overlap 4019210, overlap 4019207 CTACGCAAAATAAAA CGGCTCGCATA TTTC TATGCAAGCCG TTGTTTTATTTGGCA TERM 4649 4019235 - 4019210 - f 100 -14.1 -5.10933 | opp_overlap 4019210 4019207 CTACGCAAAATAAAA CGGCTCGCATA TTTC TATGCAAGCCG TTGTTTTATTTGGCA TERM 4650 4019752 - 4019731 - g 75 -10.2 -3.28785 | overlap 4019726 TCGTAAAACACCTAA GCCAAAGC ATGAGA GCTTTGGC TATAACACTAAGCGT Shew185_3385 4019690 - 4020028 + | SecC motif-containing protein Shew185_3386 4021099 - 4020140 - | hypothetical protein TERM 4651 4021046 - 4021036 - G 75 -5.4 -4.81249 | opp_overlap 4021036 GTTGAAACTTAAAAA CACT GTA AGTG GTTCTCGCTGTTAAA Shew185_3387 4022248 - 4021301 - | 3'-5' exonuclease Shew185_3388 4023232 - 4022297 - | hypothetical protein TERM 4652 4023524 - 4023508 - g 85 -5 -5.40004 | opp_overlap 4023515 GATGAAATGAAAAAA GCTGCC GGTTG GGCCGC GCTCAAGTACGTTGA Shew185_3389 4023484 - 4024146 + | ribose-5-phosphate isomerase A TERM 4653 4024248 - 4024221 - T 100 -13.6 -5.12971 | gap 1, opp_overlap 4024221 AATACGCAATAAAAA TGCCAGCCACTTT TTC AAAG-GGCTGGCA TTTTTTATGGTTTTT TERM 4654 4024221 - 4024248 + T 100 -13.6 -5.47914 | gap 1, opp_overlap 4024221 AATACGCAATAAAAA TGCCAGCCACTTT TTC AAAG-GGCTGGCA TTTTTTATGGTTTTT Shew185_3390 4025610 - 4024420 - | PUA domain-containing protein TERM 4655 4025638 - 4025625 - H 71 -5.3 -4.57073 | overlap 4025628 TAGTTGCCTTAAAAA TAGTG CCGC CACTA AAAAAAGGGCTGCAG TERM 4656 4025710 - 4025721 + H 71 -7.2 -3.94634 | opp_overlap 4025709 GTGCGAGTACCGAAC GCGC CGCA GCGC TTATTTGCCATCATC Shew185_3391 4026107 - 4026559 + | putative lipoprotein TERM 4657 4026607 - 4026582 - f 89 -9 -4.76041 | opp_overlap 4026583, overlap 4026583 TATACTGATTAAAAA TCGTGACCAG TTTGTG CTGGTCACGT TTATCCCCCTGTTTA TERM 4658 4026606 - 4026583 - f 90 -12.5 -3.44902 | opp_overlap 4026583, overlap 4026582 ATACTGATTAAAAAT CGTGACCAG TTTGTG CTGGTCACG TTTATCCCCCTGTTT TERM 4659 4026583 - 4026606 + F 100 -13.2 -3.89903 | opp_overlap 4026583 4026582 ATACTGATTAAAAAT CGTGACCAGT TTGT GCTGGTCACG TTTATCCCCCTGTTT Shew185_3392 4026662 - 4027561 + | hypothetical protein Shew185_3393 4027558 - 4028370 + | hypothetical protein Shew185_3394 4029690 - 4028482 - | endonuclease/exonuclease/phosphatase Shew185_3395 4030474 - 4031181 + | hypothetical protein TERM 4660 4031258 - 4031238 - g 100 -5.5 -5.6473 | ACAACACTAAAAAAA TCATCCATA ACC TACAGATGA TTATCGAGCAACGCA Shew185_3396 4031201 - 4032574 + | magnesium transporter TERM 4661 4032591 - 4032625 + F 100 -15.9 -3.52919 | opp_overlap 4032584 4032591 GCCTAAAACCTCAAA GTGAACCAAGCTAAG TTAAC CTTAGCGTGGTTCAC TTATCATTCGATAGT TERM 4662 4032625 - 4032591 - f 100 -15.9 -3.76413 | opp_overlap 4032591, overlap 4032584 GCCTAAAACCTCAAA GTGAACCAAGCTAAG TTAAC CTTAGCGTGGTTCAC TTATCATTCGATAGT TERM 4663 4032889 - 4032867 - g 71 -6.3 -4.24002 | opp_overlap 4032870 GCTCAAAGCTGAAAA TAAGGCGCT TAAAG AGCGGCTTA TCCAATTAGAACAAC TERM 4664 4033829 - 4033819 - g 78 -5.4 -4.98522 | AATGCCAGACAAAAA GGTA ATT TACC TGAGATGGTCAAACA Shew185_3397 4032835 - 4033923 + | methyl-accepting chemotaxis sensory transducer TERM 4665 4033967 - 4033985 + F 95 -8.8 -5.37345 | opp_overlap 4033967 ATAAAACCTACCTAA GAGCGCCA TAT TCGCGCTC TTTTTTATCGTTAAA Shew185_3398 4034133 - 4034906 + | extracellular solute-binding protein Shew185_3399 4035724 - 4034987 - | pseudouridine synthase TERM 4666 4035859 - 4035847 - R 77 -4.9 -4.88795 | ACTCAATAAAACAAA TTCAA AAA TTGAA CAAAACAGACACAGG TERM 4667 4035886 - 4035913 + r 93 -14.2 -2.90194 | opp_overlap 4035887 CAGGCCTAAATAATA AGGCCGCATAAC CTAA GTTATGCGGCCC TCTAATTCACGGCAT TERM 4668 4035912 - 4035887 - R 100 -17.7 -4.08958 | opp_overlap 4035886 AGGCCTAAATAATAA GGCCGCATAAC CTAA GTTATGCGGCC CTCTAATTCACGGCA Shew185_3400 4039165 - 4035941 - | carbamoyl phosphate synthase large subunit TERM 4669 4038201 - 4038180 - G 73 -7.3 -4.20696 | gap 1, opp_overlap 4038180 4038181, overlap 4038181 4038184 TCATCAAGGGTAAAA CCGACCGCTA ACT TAGCGG-CGA TTTTCGCAATCGGGA Shew185_3401 4040368 - 4039193 - | carbamoyl phosphate synthase small subunit TERM 4670 4040516 - 4040528 + r 82 -6.2 -4.89233 | opp_overlap 4040516 GGGTGCAAAAAAAAA CGCC ATATC GGCG TTTTTAATATTAATG TERM 4671 4040528 - 4040516 - R 100 -6.9 -6.06723 | opp_overlap 4040516 GGGTGCAAAAAAAAA CGCCA TAT CGGCG TTTTTAATATTAATG Shew185_3402 4041350 - 4040538 - | dihydrodipicolinate reductase TERM 4672 4041415 - 4041385 - R 85 -11.3 -3.28712 | opp_overlap 4041390, overlap 4041390 CTTTGTCTTCCATAA GAAAACGCCTAAG ACAGG CTTAGGCGTTTTA TCAATATTAGATGAT TERM 4673 4041410 - 4041390 - R 95 -11.2 -4.77165 | opp_overlap 4041390, overlap 4041385 TCTTCCATAAGAAAA CGCCTAAG ACAGG CTTAGGCG TTTTATCAATATTAG TERM 4674 4041390 - 4041410 + r 93 -11.2 -4.4727 | opp_overlap 4041390 4041385 TCTTCCATAAGAAAA CGCCTAAG ACAGG CTTAGGCG TTTTATCAATATTAG TERM 4675 4041464 - 4041440 - R 73 -8.7 -3.71487 | GATGATATCTAATAA TTCAACTTCGA ATA CCAAAGTTGAA TAAGGAGGAATCGAT Shew185_3403 4042039 - 4041422 - | peptidylprolyl isomerase FKBP-type Shew185_3404 4043066 - 4042257 - | peptidase M48 Ste24p Shew185_3405 4044237 - 4043653 - | GCN5-related N-acetyltransferase Shew185_3406 4045756 - 4044425 - | DEAD/DEAH box helicase domain-containing protein Shew185_3407 4046375 - 4046653 + | hypothetical protein TERM 4676 4046667 - 4046683 + F 89 -9.5 -4.13945 | opp_overlap 4046673 4046674 AAAAACTCTTAGGTT TCCAAAC TTC GTTTGGA TTTTCGAATCGAAAT TERM 4677 4046740 - 4046710 - f 70 -5.5 -4.40221 | gap 2, overlap 4046714 AAATCAAAGTCAAAA TCAACGTCGTGGGGC TTC ACCCCAC-ACG-CGA CCAAAAGGGGAAAAG TERM 4678 4046737 - 4046714 - f 79 -9.6 -3.73399 | gap 1, overlap 4046710 CAAAGTCAAAATCAA CGTCGTGGGGC TTC ACCCCAC-ACG CGACCAAAAGGGGAA TERM 4679 4047226 - 4047216 - f 75 -5.4 -4.74801 | CAACCTCAGTAAAAA TACC TTT GGTA AATACTACTTAGATG TERM 4680 4047413 - 4047428 + G 71 -6.8 -4.18042 | overlap 4047405 GTCCTCATTGGCGTG GCCAGC TATT GTTGGC TTTGCTTTATGTAGG Shew185_3408 4047366 - 4048013 + | response regulator receiver protein Shew185_3409 4048083 - 4048232 + | hypothetical protein TERM 4681 4048223 - 4048250 + T 100 -13.5 -4.29106 | gap 1, opp_overlap 4048223 ATCGAACACAAAAAA GCCCCGCTAGTG CTAAA CACT-GCGGGGC TTTATTCATCTAGCG TERM 4682 4048250 - 4048223 - T 100 -14.2 -5.48063 | gap 1, opp_overlap 4048223 ATCGAACACAAAAAA GCCCCGCTAGTGC TAA ACACT-GCGGGGC TTTATTCATCTAGCG Shew185_3410 4049434 - 4048301 - | chaperone protein DnaJ TERM 4683 4049495 - 4049467 - R 100 -15.4 -4.15044 | gap 1 CTGGTGTTGAACAAA CGGGCGTTA-GGG TTGC CCCGTAACGCCCG CCTAGAAATTAACGC Shew185_3411 4051464 - 4049545 - | chaperone protein DnaK Shew185_3412 4051753 - 4052679 + | hypothetical protein Shew185_3413 4052892 - 4053368 + | ybaK/ebsC protein Shew185_3414 4053579 - 4053881 + | hypothetical protein TERM 4684 4053938 - 4053972 + T 88 -8.6 -4.72556 | opp_overlap 4053943, overlap 4053943 CAAACACTGCGAACA AAAAAGCCGTCAACAC AGT GTGTTAACGGCTTTAA TTTTATGGTTTTTAA TERM 4685 4053943 - 4053967 + T 100 -12.9 -4.29391 | opp_overlap 4053943, overlap 4053938 ACTGCGAACAAAAAA GCCGTCAACAC AGT GTGTTAACGGC TTTAATTTTATGGTT TERM 4686 4053967 - 4053943 - T 100 -15.1 -5.45652 | opp_overlap 4053943 4053938 ACTGCGAACAAAAAA GCCGTCAACAC AGT GTGTTAACGGC TTTAATTTTATGGTT Shew185_3415 4055268 - 4053991 - | gamma-glutamyl phosphate reductase Shew185_3416 4056399 - 4055281 - | gamma-glutamyl kinase TERM 4687 4056538 - 4056518 - R 100 -11.9 -4.7254 | ATCGCGCATGAAAAA GGGCCATCT ATG AGATGACCC TCAAAAAATATTGTC TERM 4688 4056567 - 4056547 - R 81 -5.5 -5.03715 | opp_overlap 4056547 4056557 4056558, overlap 4056549 ATGACCCTCAAAAAA TATTGTCTA TTG TAGACAATC TACGTTGTGAGCTCA TERM 4689 4056565 - 4056549 - R 77 -8.1 -4.14633 | opp_overlap 4056547 4056557 4056558, overlap 4056547 GACCCTCAAAAAATA TTGTCTA TTG TAGACAA TCTACGTTGTGAGCT Shew185_3417 4057899 - 4056610 - | xanthine/uracil/vitamin C permease TERM 4690 4057029 - 4057019 - G 77 -8.2 -4.2828 | GTCGACGTACCAAAA GCGG CGC CCGC AATAGTCGCTAAACT TERM 4691 4057900 - 4057912 + r 93 -7.7 -5.48213 | opp_overlap 4057899 CAGTTTTTCTAACAT GGAAC AAG GTTCC TTTTTATTTTAAGTA Shew185_3418 4059061 - 4058354 - | hypothetical protein Shew185_3419 4060420 - 4059362 - | alpha/beta hydrolase fold TERM 4692 4060844 - 4060826 - R 100 -14.6 -5.91981 | AAAAGGCAAAAAAAA GCCTGCTC AAT GAGCAGGC AAAGACATATTTCAA Shew185_3420 4061184 - 4061008 - | hypothetical protein TERM 4693 4061240 - 4061226 - R 83 -7.2 -4.82901 | overlap 4061229 GTCCTTGGAGAAAAA TATCCA TCC TGGATA GACTAGAGAGGAAAG TERM 4694 4061453 - 4061401 - R 82 -6 -4.96848 | gap 1, opp_overlap 4061403, overlap 4061403 TGCTTCACATAAAAA CAGAAATAATCCTGTAAGCATCTAA TAAA TAAGATA-TTACAGAATTATTTCTT TTTGTTACTAGGGCG TERM 4695 4061403 - 4061451 + r 74 -4.2 -5.1356 | gap 1, opp_overlap 4061401 4061403 CTTCACATAAAAACA GAAATAATCCTGTAAGCATCTAA TAAA TAAGATA-TTACAGAATTATTTC TTTTTGTTACTAGGG TERM 4696 4061451 - 4061403 - R 79 -8.6 -4.11141 | gap 1, opp_overlap 4061403, overlap 4061401 CTTCACATAAAAACA GAAATAATCCTGTAAGCATCTAA TAAA TAAGATA-TTACAGAATTATTTC TTTTTGTTACTAGGG TERM 4697 4061580 - 4061615 + r 79 -8.3 -3.99806 | opp_overlap 4061571 4061577, overlap 4061577 CAAAGAGCAAGAGCT TGCCAGACGAACCCT TCGGGC AGCGTTTGGCTGGCA TTTCTGCTGCGTTAT Shew185_3421 4063272 - 4061734 - | peptidase M17 leucyl aminopeptidase domain-containing protein TERM 4698 4062182 - 4062192 + g 71 -8.2 -3.767 | opp_overlap 4062169 4062166 ATTTCAGGCTTCACC GCCG ACA CGGC TTTGATGCGTAAATG TERM 4699 4064834 - 4064805 - g 72 -10.1 -3.05384 | opp_overlap 4064812 4064814, overlap 4064809 GTGTGGTCTATTCAA GAAACCTTATCCA GAAA TGGATATGGTCTC GATTGGCCCCACGAT TERM 4700 4064830 - 4064809 - g 73 -7.3 -4.20516 | opp_overlap 4064812 4064814, overlap 4064805 GGTCTATTCAAGAAA CCTTATCCA GAAA TGGATATGG TCTCGATTGGCCCCA Shew185_3422 4063492 - 4064952 + | aminoacyl-histidine dipeptidase TERM 4701 4064994 - 4065028 + F 100 -13 -5.24531 | opp_overlap 4064997, overlap 4064997 AATTGGCACTTAATT CAAGGCCACATCTG CTCAAGT CAGATGTGGCCTTA TTTTTTATCGCGCCT TERM 4702 4064997 - 4065025 + F 100 -14.7 -4.72201 | opp_overlap 4064997, overlap 4064994 TGGCACTTAATTCAA GGCCACATCTG CTCAAGT CAGATGTGGCC TTATTTTTTATCGCG TERM 4703 4065025 - 4064997 - f 100 -14.7 -3.19192 | opp_overlap 4064997 4064994 TGGCACTTAATTCAA GGCCACATCTG CTCAAGT CAGATGTGGCC TTATTTTTTATCGCG TERM 4704 4065626 - 4065606 - g 83 -7.5 -4.72486 | overlap 4065597 4065607 GATAAATGGCAAAAA TCCTTCGCC AAT GGCAAAGGC GATAAGCACATAGGT TERM 4705 4065625 - 4065607 - g 78 -11 -3.42407 | overlap 4065597 4065606 ATAAATGGCAAAAAT CCTTCGCC AAT GGCAAAGG CGATAAGCACATAGG Shew185_3423 4065210 - 4065764 + | hypothetical protein TERM 4706 4067256 - 4067234 - g 88 -8.4 -4.86621 | ATCGGTAATGAAAAA GCGATTTCGA GCG TCGAAGCCGC CAGTAATGCCGGTGA Shew185_3424 4065860 - 4067506 + | methyl-accepting chemotaxis sensory transducer Shew185_3425 4068576 - 4067644 - | hypothetical protein Shew185_3426 4068669 - 4069568 + | LysR family transcriptional regulator Shew185_3427 4070689 - 4069613 - | DNA polymerase IV TERM 4707 4069686 - 4069674 - G 71 -9.1 -3.54653 | ACTGCGAGGATAGAA TCGGC GAG GCCGA CCGAAATACCTAATA TERM 4708 4070788 - 4070801 + r 80 -8.1 -4.42653 | opp_overlap 4070788 AACCTAAAATAAAAA GGAGC CTAA GCTCC TTTTGTGAGTGCACT TERM 4709 4070801 - 4070788 - R 93 -8.1 -5.49568 | opp_overlap 4070788 AACCTAAAATAAAAA GGAGC CTAA GCTCC TTTTGTGAGTGCACT Shew185_3428 4072882 - 4070879 - | methyl-accepting chemotaxis sensory transducer TERM 4710 4073139 - 4073169 + r 73 -10.5 -2.7644 | opp_overlap 4073145, overlap 4073138 4073142 4073158 AGGAAGCGGTAGAAA TAAGAACAGCGAG TTAGC CTCGCTGATCTTG ATTTAGCGATTACAT TERM 4711 4073142 - 4073166 + r 79 -10 -3.52918 | opp_overlap 4073145, overlap 4073139 4073138 4073158 AAGCGGTAGAAATAA GAACAGCGAG TTAGC CTCGCTGATC TTGATTTAGCGATTA TERM 4712 4073163 - 4073145 - R 89 -10.3 -4.15703 | opp_overlap 4073142 4073139 4073138 4073158 CGGTAGAAATAAGAA CAGCGAG TTAGC CTCGCTG ATCTTGATTTAGCGA Shew185_3429 4073646 - 4073179 - | bacterioferritin Shew185_3430 4074129 - 4073656 - | bacterioferritin TERM 4713 4074342 - 4074362 + r 85 -11.2 -3.28712 | opp_overlap 4074342 TTTCAGGCAAAAAAA TAGCCTCC AGATG GGAGGCTA TTGTCGAAACAGACG TERM 4714 4074362 - 4074342 - R 100 -11.2 -5.47218 | opp_overlap 4074342 TTTCAGGCAAAAAAA TAGCCTCC AGATG GGAGGCTA TTGTCGAAACAGACG Shew185_3431 4074614 - 4074390 - | hypothetical protein Shew185_3432 4075677 - 4074631 - | ApbE family lipoprotein TERM 4715 4075625 - 4075603 - G 100 -12 -5.63517 | GGCTGAAACAAAAAA GGCCAGCCCT ACG AGGACTAGCC AGTTAAATGAATGCT TERM 4716 4075751 - 4075717 - R 85 -8.7 -4.35524 | gap 1, opp_overlap 4075712 4075717, overlap 4075710 CCCTTAAATGCAAAA GTTGCAGATG-AGAGA TTAT CCTCAACATCTGCAAC TTTTCTATCTAGGAC TERM 4717 4075717 - 4075751 + r 82 -8 -4.60797 | gap 1, opp_overlap 4075710 4075717, overlap 4075712 CCCTTAAATGCAAAA GTTGCAGATG-AGAG ATTATC CTCAACATCTGCAAC TTTTCTATCTAGGAC Shew185_3433 4077032 - 4075776 - | Na(+)-translocating NADH-quinone reductase subunit F Shew185_3434 4077687 - 4077079 - | Na(+)-translocating NADH-quinone reductase subunit E Shew185_3435 4078325 - 4077693 - | Na(+)-translocating NADH-quinone reductase subunit D Shew185_3436 4079113 - 4078325 - | Na(+)-translocating NADH-quinone reductase subunit C Shew185_3437 4080305 - 4079106 - | Na(+)-translocating NADH-quinone reductase subunit B Shew185_3438 4081639 - 4080305 - | Na(+)-translocating NADH-quinone reductase subunit A Shew185_3439 4084095 - 4082041 - | TonB-dependent receptor TERM 4718 4084177 - 4084190 + r 77 -8.1 -4.13872 | opp_overlap 4084177 TGTTTGAAAAAAAAA GCGAC TCTC GTCGC TTTCTCTCATTAACT TERM 4719 4084190 - 4084177 - R 100 -8.1 -6.06723 | opp_overlap 4084177 TGTTTGAAAAAAAAA GCGAC TCTC GTCGC TTTCTCTCATTAACT Shew185_3440 4084770 - 4084261 - | S-ribosylhomocysteinase TERM 4720 4084523 - 4084513 - G 71 -4.6 -4.59081 | CAAACTCATATAAAA GCCG GTA CGAC ATCCCATTGGCGAAA Shew185_3441 4086141 - 4084939 - | TRAP dicarboxylate transporter- DctP subunit TERM 4721 4085702 - 4085692 - G 83 -2.4 -5.54894 | opp_overlap 4085693 4085699, overlap 4085694 AATCGATGAAAAAAA CTGC GCC GCGG GTGCCTTGCCTTTCC TERM 4722 4086272 - 4086253 - R 95 -9.3 -5.48213 | opp_overlap 4086252 4086247 GACCTAAAACAAAAA GCCACTC GATGAG GAGTGGC CTTGGGTTCTAAGCT Shew185_3442 4086664 - 4086344 - | BolA family protein Shew185_3443 4087569 - 4086835 - | 2OG-Fe(II) oxygenase Shew185_3444 4087758 - 4088894 + | rRNA (guanine-N(2)-)-methyltransferase TERM 4723 4088934 - 4088953 + F 76 -7.1 -4.1822 | opp_overlap 4088934 TGAGTACTTTAATCA GGGCCAG CAATGT CTGGCTC TTTGTTAAACTGAAC Shew185_3445 4089237 - 4091087 + | hypothetical protein Shew185_3446 4091084 - 4092433 + | hypothetical protein TERM 4724 4092485 - 4092458 - T 100 -17.1 -5.243 | opp_overlap 4092458 TAAAGCACTAAAAAA GCCGCCATCGA ATTGAA TCGATGGCGGC TTTCTACTGTTAATG TERM 4725 4092458 - 4092485 + T 100 -17.1 -4.07455 | opp_overlap 4092458 TAAAGCACTAAAAAA GCCGCCATCGA ATTGAA TCGATGGCGGC TTTCTACTGTTAATG Shew185_3447 4093852 - 4092554 - | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 4726 4093900 - 4093916 + r 72 -9.5 -3.02144 | opp_overlap 4093899, overlap 4093880 TCGAACCCAAAGGAT TGCACAA GAT TTGTGCA TGTTCAACAAGCTAA Shew185_3448 4095464 - 4094052 - | GntR family transcriptional regulator TERM 4727 4095153 - 4095141 - G 76 -9.1 -3.95042 | opp_overlap 4095139 AAAACCTGAACCAAA GGGCA CTA TGCCC GCCTGTTTTGACGCC Shew185_3449 4095622 - 4096956 + | cytochrome bd ubiquinol oxidase subunit I TERM 4728 4097927 - 4097953 + G 80 -7.2 -4.55128 | TAAGCTTTATGCTCG TCGGCGCGCTGA TGA TCATCCCGCTGA TTTTGGTTTACACCT Shew185_3450 4097017 - 4098024 + | cytochrome d ubiquinol oxidase, subunit II TERM 4729 4098086 - 4098056 - f 93 -12.6 -4.08394 | opp_overlap 4098054 4098057, overlap 4098057 AGAGGCTTCCCAAAA CGCGACCTAAGCTA ATT TGGCTTAGGTCGCT AATTCACTTTAGATA TERM 4730 4098057 - 4098085 + F 100 -18.3 -2.82156 | opp_overlap 4098056 4098057, overlap 4098054 GAGGCTTCCCAAAAC GCGACCTAAGCTA ATT TGGCTTAGGTCGC TAATTCACTTTAGAT TERM 4731 4098085 - 4098057 - f 100 -16.1 -3.04715 | opp_overlap 4098057 4098054, overlap 4098056 GAGGCTTCCCAAAAC GCGACCTAAGCTA ATT TGGCTTAGGTCGC TAATTCACTTTAGAT Shew185_3451 4098111 - 4098260 + | hypothetical protein TERM 4732 4099146 - 4099130 - g 76 -10.9 -3.21099 | TGGGGTGATTAGCAA GCTTGAG CAG CTCAAGC ATGATACGGCGAGTG Shew185_3452 4099008 - 4099409 + | GreA/GreB family elongation factor TERM 4733 4100087 - 4100061 - T 87 -12.4 -3.34029 | opp_overlap 4100061 TAAATAGGCCGAGAA TAGGGTGCTAAA TGC TTTGGCACCCTA TTTTATTTCTCGGTT TERM 4734 4100061 - 4100087 + T 100 -14.6 -5.01553 | opp_overlap 4100061 TAAATAGGCCGAGAA TAGGGTGCTAAA TGC TTTGGCACCCTA TTTTATTTCTCGGTT Shew185_3453 4101000 - 4100182 - | helix-turn-helix domain-containing protein TERM 4735 4100563 - 4100553 - G 71 -6.8 -4.2828 | overlap 4100562 GCTGATCGAGCAAAA CCTC AAC GAGG CGCTTATCCGCCGCC TERM 4736 4100801 - 4100788 - G 70 -2.3 -4.84359 | opp_overlap 4100792 CGACGGCGATAAAAA CCGTT GCCC AGCGG CATGTAATTCCATGA TERM 4737 4101207 - 4101219 + H 75 -7.7 -4.13014 | overlap 4101201 GCAGAGTCTCTCGTT CTGAG TTA CTCAG TTTTAGCCATGTAGA TERM 4738 4101736 - 4101750 + G 81 -10 -4.03167 | overlap 4101742 AATCTTGCCATCGGC GTCACC CAA GGTGAC TTGTTATTGCTGTTC Shew185_3454 4101298 - 4102188 + | hypothetical protein TERM 4739 4102207 - 4102228 + F 77 -10.1 -3.31565 | opp_overlap 4102207, overlap 4102205 AAGCTAAACACCTAA GCCCTGGCT GCAC AGTCGGGGC TATTCATCTTCTTTC Shew185_3455 4102352 - 4103983 + | methyl-accepting chemotaxis sensory transducer TERM 4740 4104066 - 4104020 - T 70 -8.7 -3.37354 | CATAGTTAGCGACAA GCGGTTAGTGGCAAGCGGT TAATAACAG ACCGCTCGCAACAAACAGC TAAAACGAAAAGAGT TERM 4741 4104103 - 4104073 - T 70 -9.1 -3.1926 | opp_overlap 4104078, overlap 4104078 ACAAACAGCTAAAAC GAAAAGAGTGCCC AATAA AGGCACTCTTTTT AATGTGTTTTAACAT TERM 4742 4104078 - 4104098 + T 90 -8.3 -4.91573 | opp_overlap 4104073 4104078 CAGCTAAAACGAAAA GAGTGCC CAATAAA GGCACTC TTTTTAATGTGTTTT TERM 4743 4104098 - 4104078 - T 89 -9 -4.68645 | opp_overlap 4104078, overlap 4104073 CAGCTAAAACGAAAA GAGTGCCC AATAA AGGCACTC TTTTTAATGTGTTTT Shew185_3456 4104643 - 4104179 - | hypothetical protein Shew185_3457 4105570 - 4104725 - | ApbE family protein, putative TERM 4744 4105465 - 4105449 - G 77 -6.5 -4.64766 | opp_overlap 4105449 4105464 GTCACACGTGAAAAA GCCGC TGTCATC GCGGC TTCTAAGGCTTTATC Shew185_3458 4106121 - 4105567 - | FMN-binding domain-containing protein Shew185_3459 4107138 - 4106230 - | hypothetical protein Shew185_3460 4107819 - 4109153 + | Na+/H+ antiporter NhaC TERM 4745 4109247 - 4109230 - f 87 -12.7 -3.26932 | opp_overlap 4109230, overlap 4109225 ATAAGTACAATTGAA GGAGCCG AATT CGGCTCC TTTTTTATGTTTAAA TERM 4746 4109230 - 4109247 + F 100 -12.7 -5.56264 | opp_overlap 4109230 4109225 ATAAGTACAATTGAA GGAGCCG AATT CGGCTCC TTTTTTATGTTTAAA Shew185_3461 4109283 - 4110011 + | pseudouridine synthase TERM 4747 4110425 - 4110449 + G 86 -13.7 -2.97021 | opp_overlap 4110430 4110431, overlap 4110427 4110431 TGATCATGAGCCTTT GATAAGCTGGC ACA GCCAGTTTATC TCTCCTCTTTACCGA TERM 4748 4110427 - 4110447 + G 72 -10.5 -3.0362 | opp_overlap 4110430 4110431, overlap 4110425 4110431 ATCATGAGCCTTTGA TAAGCTGGC ACA GCCAGTTTA TCTCTCCTCTTTACC TERM 4749 4110431 - 4110443 + G 80 -9.1 -4.16904 | opp_overlap 4110430 4110431, overlap 4110427 4110425 TGAGCCTTTGATAAG CTGGC ACA GCCAG TTTATCTCTCCTCTT Shew185_3462 4110120 - 4111001 + | hypothetical protein Shew185_3463 4111016 - 4111492 + | hypothetical protein TERM 4750 4111733 - 4111761 + T 100 -13.3 -5.86465 | opp_overlap 4111733 CATTGCACAAAAAAA TAGCGATAAACCC TGT GAGTTTATCGCTA TTTTTTTGTCTTGTT TERM 4751 4111761 - 4111733 - T 100 -15.5 -5.626 | opp_overlap 4111733 CATTGCACAAAAAAA TAGCGATAAACCC TGT GAGTTTATCGCTA TTTTTTTGTCTTGTT TERM 4752 4111851 - 4111873 + T 70 -8.4 -3.36581 | opp_overlap 4111845, overlap 4111852 GCCACTATAGGCCCC ACCATTGCTG GTG CGGCAATGGA TTACTTAACGATTTC TERM 4753 4111852 - 4111872 + T 81 -11.9 -2.61467 | opp_overlap 4111845, overlap 4111851 CCACTATAGGCCCCA CCATTGCTG GTG CGGCAATGG ATTACTTAACGATTT Shew185_3464 4114030 - 4111874 - | hypothetical protein TERM 4754 4113736 - 4113746 + g 89 -3.2 -5.626 | TAGCTAAAAAACCAT CTTG CAG CAGG TTTTTTTCTGGGGTG TERM 4755 4114182 - 4114165 - R 100 -11.3 -5.18355 | opp_overlap 4114165 CCTAAAAAGCAAAAA GTCAGGC CGGG GCCTGAC TTTATCACATGGGAT TERM 4756 4114165 - 4114182 + r 90 -11.3 -3.89524 | opp_overlap 4114165 CCTAAAAAGCAAAAA GTCAGGC CGGG GCCTGAC TTTATCACATGGGAT TERM 4757 4114239 - 4114223 - R 79 -5.9 -4.90455 | opp_overlap 4114223 ACAGACTCAGAAAAA TTCGCTT ACA AAGCAAA TACATTTCATCAGCT Shew185_3465 4115501 - 4114326 - | aromatic amino acid permease TERM 4758 4116026 - 4115994 - R 82 -12.2 -3.02144 | opp_overlap 4115988 CGAGCGCGCTGAATA TGGGCTTAAACATA TTCGC TGTGTTTAAGCCCA ATCACATCATGTTGA Shew185_3466 4117512 - 4116067 - | N-acetylglucosamine-binding protein A TERM 4759 4117828 - 4117817 - H 72 -4.4 -4.76123 | AAATTAGCAACAAAA GACA ACGC TGTC AAAAAATTAACCCAT Shew185_3467 4118156 - 4118710 + | hypothetical protein TERM 4760 4118743 - 4118766 + T 86 -9.6 -4.05446 | opp_overlap 4118744, overlap 4118744 TTACCGCAACAAAAA AGCCAGTGAT AAAC ATCACTGGCC TTTCTACTTACGACG TERM 4761 4118744 - 4118765 + T 91 -13.1 -3.02946 | opp_overlap 4118744, overlap 4118743 TACCGCAACAAAAAA GCCAGTGAT AAAC ATCACTGGC CTTTCTACTTACGAC TERM 4762 4118765 - 4118744 - T 100 -13.1 -5.46657 | opp_overlap 4118744 4118743 TACCGCAACAAAAAA GCCAGTGAT AAAC ATCACTGGC CTTTCTACTTACGAC Shew185_3468 4120312 - 4118837 - | catalase Shew185_3469 4120889 - 4120647 - | hypothetical protein TERM 4763 4120803 - 4120774 - G 77 -6.3 -4.56367 | opp_overlap 4120775 4120777, overlap 4120775 TAGGCCACAAATAAA GCCGCGCCGATGA GATT CCACCAGCGCAGT TTTTTGATGTTCGAC TERM 4764 4120802 - 4120775 - G 73 -9.8 -3.33097 | opp_overlap 4120775 4120777, overlap 4120774 AGGCCACAAATAAAG CCGCGCCGATGA GATT CCACCAGCGCAG TTTTTTGATGTTCGA TERM 4765 4120775 - 4120802 + g 76 -2.5 -5.27779 | opp_overlap 4120774 4120775, overlap 4120777 AGGCCACAAATAAAG CCGCGCCGATG AGATTC CACCAGCGCAG TTTTTTGATGTTCGA Shew185_3470 4121444 - 4121007 - | thioesterase superfamily protein TERM 4766 4121260 - 4121246 - G 79 -11.4 -3.14881 | CAACGGTTTCAGCAA GCGCGA CAT TCGCGC CGCCATGGACTATCC Shew185_3471 4122005 - 4121550 - | hypothetical protein TERM 4767 4122045 - 4122062 + r 88 -11.3 -3.55866 | opp_overlap 4122045, overlap 4122041 AAAACAACTAAAAAA GGGATGG CGAA CCATCCC TTCGTTTCAGTCTAG TERM 4768 4122062 - 4122045 - R 100 -11.3 -5.43514 | opp_overlap 4122045 4122041 AAAACAACTAAAAAA GGGATGG CGAA CCATCCC TTCGTTTCAGTCTAG Shew185_3472 4124728 - 4122116 - | endonuclease/exonuclease/phosphatase TERM 4769 4124165 - 4124147 - G 74 -11 -2.93393 | opp_overlap 4124160, overlap 4124146 TTGTACTTGATAAAT CGGCACTA TTT TAGCGCCG CTGCAGCTAAAGAGC TERM 4770 4125310 - 4125289 - R 100 -8 -5.76633 | opp_overlap 4125291 TTACAGACAAAAAAA TACCGCCC ATTTAG GAGCGGTA TTCCACTTACTGAGT Shew185_3473 4126121 - 4125348 - | peptidylprolyl isomerase FKBP-type TERM 4771 4125737 - 4125749 + g 74 -2.7 -5.09173 | CAGACTTAGCCTTAT TTTCT TCA AGGAA TTTTTTACCGTCTTC TERM 4772 4126036 - 4126046 + g 91 -6.8 -5.3321 | TCAACACTTGTACTC GCAG CAG CTGC TTTTTCTTCTTGATT Shew185_3474 4126276 - 4127226 + | WD-40 repeat-containing protein Shew185_3475 4127236 - 4127448 + | SlyX family protein Shew185_3476 4127513 - 4128070 + | peptide deformylase Shew185_3477 4128070 - 4129473 + | TPR repeat-containing protein Shew185_3478 4129531 - 4130136 + | membrane lipoprotein lipid attachment site TERM 4773 4130197 - 4130180 - f 73 -8.4 -3.63073 | opp_overlap 4130180 CAGAGTTTCCAAGAA GCCAGC TTAAAC GCTGGC TTTTTTTTACATTTT TERM 4774 4130180 - 4130197 + F 100 -8.4 -5.91981 | opp_overlap 4130180 CAGAGTTTCCAAGAA GCCAGC TTAAAC GCTGGC TTTTTTTTACATTTT TERM 4775 4132564 - 4132531 - g 73 -9.7 -3.27994 | gap 1, overlap 4132534 TTAACCTTAGATCAA GATTTACGCTGGGCGA TCA TCACCCAGC-TCAATC GCTATGATTTCCCTA Shew185_3479 4130389 - 4133022 + | aminopeptidase N TERM 4776 4133038 - 4133007 - f 75 -5.4 -4.72272 | gap 1 CGTGCTGATCAAAAA TAAAATGACC-CAAT GAG ATTAAGGCCATTTTA GAATTAACAAGGAGC TERM 4777 4133049 - 4133066 + F 93 -7.7 -5.37043 | opp_overlap 4133049 TTTTAGAATTAACAA GGAGCTT CTAG GAGCTCC TTTTTTATGTGCAGT TERM 4778 4133492 - 4133477 - f 76 -7.6 -4.29302 | GCTATACTAAAACAA CGTTAG AGAG CTAACG GAATATAAAGGAATA TERM 4779 4133713 - 4133702 - g 73 -2.2 -5.10064 | overlap 4133703 TGCAAGACAGAAAAA TGGC CATT ACCA GCCTAAAACAAGCCA Shew185_3480 4133512 - 4135404 + | methyl-accepting chemotaxis sensory transducer TERM 4780 4135456 - 4135486 + T 100 -14.8 -4.43877 | opp_overlap 4135456 CGCTACATACAATAA TGCCCGTCAATGTC ACT GACATTCGCGGGCA TTTCTTTACACATTC TERM 4781 4135486 - 4135456 - T 93 -12.6 -3.92996 | opp_overlap 4135456 CGCTACATACAATAA TGCCCGTCAATGTC ACT GACATTCGCGGGCA TTTCTTTACACATTC TERM 4782 4135559 - 4135572 + T 71 -6.7 -3.9693 | ACACTATCTTAGTCA CCTTG TTTT CAAGG TTATTTAACTCAGTG Shew185_3481 4137008 - 4135542 - | diguanylate cyclase with PAS/PAC sensor TERM 4783 4136121 - 4136108 - G 73 -2.3 -5.00884 | ACCTGTCGTAAAAAA GCTCA CGAT TGGGC AACAGGGTTAGCTGA TERM 4784 4137261 - 4137241 - H 90 -11.2 -4.12198 | opp_overlap 4137240 CACAATGCCCCAAAA CCTAGCCT TATGT AGGCTAGG GTTACATTGGCAAAT Shew185_3482 4137303 - 4138256 + | hypothetical protein TERM 4785 4138311 - 4138290 - T 79 -10.1 -3.54902 | overlap 4138291 GGACGTAAGAAGGAA CCCACGGCA AGCT CGCCGTGGA TATAGATCCAAAACA TERM 4786 4138310 - 4138291 - T 79 -11.4 -2.72459 | overlap 4138290 GACGTAAGAAGGAAC CCACGGCA AGCT CGCCGTGG ATATAGATCCAAAAC Shew185_3483 4139178 - 4138330 - | hypothetical protein Shew185_3484 4140782 - 4139313 - | phosphate transporter TERM 4787 4140980 - 4140968 - R 71 -6.3 -4.19276 | opp_overlap 4140968 CGAAAAGGGGCAAAA CATTG ATT CAATG TTAAATAATTCAACT Shew185_3485 4141846 - 4141031 - | helix-turn-helix domain-containing protein Shew185_3486 4141931 - 4142647 + | glutamine amidotransferase TERM 4788 4142723 - 4142691 - T 100 -17.9 -4.18018 | opp_overlap 4142691 4142697, overlap 4142697 CGGGCTCAGCCAAAA CAAAAACGCCAGCTA AGT TAGCTGGCGTTTTAG ATTAATGACTCACGA TERM 4789 4142691 - 4142723 + T 100 -17.9 -2.50816 | opp_overlap 4142691 4142697, overlap 4142697 CGGGCTCAGCCAAAA CAAAAACGCCAGCTA AGT TAGCTGGCGTTTTAG ATTAATGACTCACGA TERM 4790 4142697 - 4142717 + T 100 -15.5 -4.30014 | opp_overlap 4142697 4142691, overlap 4142691 CAGCCAAAACAAAAA CGCCAGCTA AGT TAGCTGGCG TTTTAGATTAATGAC TERM 4791 4142717 - 4142697 - T 100 -15.5 -5.48213 | opp_overlap 4142691 4142697, overlap 4142691 CAGCCAAAACAAAAA CGCCAGCTA AGT TAGCTGGCG TTTTAGATTAATGAC Shew185_3487 4144570 - 4142744 - | glucan biosynthesis protein D Shew185_3488 4145293 - 4144859 - | thioesterase superfamily protein TERM 4792 4145369 - 4145338 - R 93 -9.5 -5.17744 | opp_overlap 4145338 ACAGATTAATAAAAA TGACCGCGTAACC ACAGAG GGTTAGGCGATCA TTTGACTGAAAATCC Shew185_3489 4147643 - 4145472 - | catalase/peroxidase HPI TERM 4793 4146567 - 4146578 + g 71 -7.2 -4.10161 | AGTGGTTAACATGGC CGGC ACAT GCCG TTTTGAGGCGTCGTG TERM 4794 4147900 - 4147924 + r 100 -18.7 -3.00022 | opp_overlap 4147900, overlap 4147884 4147903 CGGATCATAAAAAAA CAAGGGCTGCA AAA TGCAGCCCTTG TGTCTATACGGTCAA TERM 4795 4147924 - 4147900 - R 100 -18.7 -5.67063 | opp_overlap 4147884 4147900 4147903 CGGATCATAAAAAAA CAAGGGCTGCA AAA TGCAGCCCTTG TGTCTATACGGTCAA TERM 4796 4147903 - 4147921 + r 100 -14.6 -3.64466 | opp_overlap 4147900, overlap 4147900 4147884 ATCATAAAAAAACAA GGGCTGCA AAA TGCAGCCC TTGTGTCTATACGGT Shew185_3490 4149427 - 4147955 - | carbon starvation protein CstA TERM 4797 4149959 - 4149974 + r 89 -10.4 -4.17048 | opp_overlap 4149959 TTAGAAAACAAAAAA CCAGCC AAAT GGCTGG TTCTTTTAGGGGGCA TERM 4798 4149974 - 4149959 - R 100 -10.4 -5.86976 | opp_overlap 4149959 TTAGAAAACAAAAAA CCAGCC AAAT GGCTGG TTCTTTTAGGGGGCA Shew185_3491 4151625 - 4150123 - | lysyl-tRNA synthetase Shew185_3492 4152712 - 4151654 - | peptide chain release factor 2 TERM 4799 4153907 - 4153883 - g 76 -8.5 -4.11216 | overlap 4153884 CGCCGATGGCGAAAA GGGCGGCAC GAGTTAT GTGCCGCCA CGCCAAGCCGACACG TERM 4800 4153906 - 4153884 - g 81 -12 -3.06515 | overlap 4153883 GCCGATGGCGAAAAG GGCGGCAC GAGTTAT GTGCCGCC ACGCCAAGCCGACAC TERM 4801 4154137 - 4154158 + G 71 -8.7 -3.68886 | opp_overlap 4154129 4154137 CCATACACACAGAAA TGCGCCTCG GCCA TGAGGTGCA TTTAAATCAATTAGT TERM 4802 4154345 - 4154322 - g 74 -3 -5.02074 | overlap 4154323 GTACTGGGCAAAAAA GTCGCCGTCA TTGG TGGCGGCAAT ACGGCTATCGATTGC TERM 4803 4156339 - 4156303 - g 78 -10.8 -3.28791 | ACGCGGCCTTGATAA CTGGCGTTACAGCCGA AGATA TCGCCTGTATCGCCCG CACCATAGGCACGGC Shew185_3493 4153293 - 4157570 + | formate dehydrogenase, alpha subunit TERM 4804 4157726 - 4157684 - T 100 -16.6 -2.60326 | opp_overlap 4157695, overlap 4157695 TAAAAAATAAACGAG CCAAATAAAAACGGGAGACC TTA AGTCTCCCGTTTTTATTCAA GATTGAGGCGATTAA TERM 4805 4157695 - 4157715 + T 100 -12.6 -5.08088 | opp_overlap 4157684 4157695 CGAGCCAAATAAAAA CGGGAGAC CTTAA GTCTCCCG TTTTTATTCAAGATT TERM 4806 4157715 - 4157695 - T 100 -13.3 -5.30616 | opp_overlap 4157695, overlap 4157684 CGAGCCAAATAAAAA CGGGAGACC TTA AGTCTCCCG TTTTTATTCAAGATT Shew185_3494 4159402 - 4157738 - | methyl-accepting chemotaxis sensory transducer TERM 4807 4159137 - 4159124 - G 71 -3.1 -4.84527 | GTCATACATGAAAAA GTAAC CTGC GCTAC CGAAACGTATGTCTC Shew185_3495 4160785 - 4159529 - | chromate transporter TERM 4808 4160086 - 4160073 - G 93 -4.5 -5.67063 | overlap 4160074 TCCACCATAAAAAAA CTGCC GATG AGCAG CACGAAAAAGAGCAG TERM 4809 4160800 - 4160774 - G 74 -9.4 -3.74012 | overlap 4160777 CAGATAAAAGCATAA CAAGGGCCCCAC ACA GCAGAGCCCTTA AGATAGTTTGAGCGG TERM 4810 4160797 - 4160777 - G 78 -8.9 -3.97401 | overlap 4160774 ATAAAAGCATAACAA GGGCCCCAC ACA GCAGAGCCC TTAAGATAGTTTGAG Shew185_3496 4162050 - 4160878 - | 23S rRNA methyluridine methyltransferase TERM 4811 4161615 - 4161596 - G 74 -6.4 -4.46926 | gap 1 GATCGCAGCACAAAA CGCAGCAGA TAT TC-GCCGCG CACTTGGCTGCGTGT TERM 4812 4162092 - 4162076 - R 76 -4.3 -5.17353 | opp_overlap 4162076 4162077, overlap 4162077 AGATTCAGTAAAAAA GCGCCAC ACT GTAGCGG TTTTACGGGTAAAAA TERM 4813 4162091 - 4162077 - R 70 -7.8 -3.69327 | opp_overlap 4162077 4162076, overlap 4162076 GATTCAGTAAAAAAG CGCCAC ACT GTAGCG GTTTTACGGGTAAAA Shew185_3497 4163333 - 4162158 - | FAD dependent oxidoreductase TERM 4814 4162643 - 4162627 - G 71 -10.1 -2.83343 | ATATCCAGTAGCACA TGGGCGC CTT GCACCCA ATCGAGTTCAACACC Shew185_3498 4163964 - 4163467 - | MarR family transcriptional regulator Shew185_3499 4164103 - 4164528 + | OsmC family protein TERM 4815 4164547 - 4164581 + F 89 -10.2 -4.258 | opp_overlap 4164549 4164553, overlap 4164549 4164553 4164580 CATCATCGAGCCAGC AATAAAGCACCTTATG TTA TATAGGGTGCTTTATC TTTATTAATCAATAA TERM 4816 4164579 - 4164549 - f 73 -9.9 -3.18912 | opp_overlap 4164547 4164549 4164553, overlap 4164553 TCATCGAGCCAGCAA TAAAGCACCTTAT GTTAT ATAGGGTGCTTTA TCTTTATTAATCAAT TERM 4817 4164549 - 4164579 + F 90 -12.8 -3.72775 | opp_overlap 4164549 4164553, overlap 4164547 4164553 TCATCGAGCCAGCAA TAAAGCACCTTATG TTA TATAGGGTGCTTTA TCTTTATTAATCAAT TERM 4818 4164553 - 4164575 + F 86 -9.2 -4.46976 | opp_overlap 4164549 4164553, overlap 4164549 4164547 CGAGCCAGCAATAAA GCACCTTATG TTA TATAGGGTGC TTTATCTTTATTAAT TERM 4819 4164575 - 4164553 - f 71 -6.3 -4.258 | opp_overlap 4164553 4164549 4164547, overlap 4164549 CGAGCCAGCAATAAA GCACCTTAT GTTAT ATAGGGTGC TTTATCTTTATTAAT TERM 4820 4164787 - 4164775 - f 70 -7.7 -3.71527 | opp_overlap 4164773 4164775 GTGTAATGAGTCAAA GTGTG TAG CACAC TATTTCTACCCTAAT TERM 4821 4164989 - 4164975 - f 80 -10 -3.727 | overlap 4164979 TTGACGATACTTAAA CCCACT CTC AGTGGG AGGCGCTATGACAAA Shew185_3500 4164997 - 4166442 + | hypothetical protein Shew185_3501 4166565 - 4166750 + | hypothetical protein TERM 4822 4166777 - 4166798 + T 100 -10.9 -6.44931 | gap 1, opp_overlap 4166777 ACAGCATTTAAAAAA GCGCCTCTGA TTA TCAG-GGCGC TTTTTTTTTGTTATT TERM 4823 4166798 - 4166777 - T 93 -10.9 -5.11613 | gap 1, opp_overlap 4166777 ACAGCATTTAAAAAA GCGCCTCTGA TTA TCAG-GGCGC TTTTTTTTTGTTATT Shew185_3502 4167127 - 4166837 - | hypothetical protein Shew185_3503 4167704 - 4167159 - | methyltransferase type 12 Shew185_3504 4168120 - 4167710 - | hypothetical protein TERM 4824 4168660 - 4168644 - g 80 -4.4 -5.18561 | GAAAGATTCAAAAAA CAGCAC TAGCC ATGCTG ATCTCTGGCGCAATG TERM 4825 4169078 - 4169067 - g 75 -5.8 -4.64861 | opp_overlap 4169067 CTGGCGTAAAAGAAA CCAC TGAT GTGG TTATTATCGGTTCAG TERM 4826 4169175 - 4169165 - g 74 -6.8 -4.40561 | CTGCTCGAAAAAGAA CCTG TCC CAGG TGGTAACACTAAACT Shew185_3505 4168619 - 4170409 + | flavocytochrome c TERM 4827 4170534 - 4170516 - f 86 -11.7 -3.4285 | opp_overlap 4170516 GCAGTCAATCCATAA GCGAGCC ATCAG GGCTCGC TTTTTTTATCAACAG TERM 4828 4170516 - 4170534 + F 100 -11.7 -5.60993 | opp_overlap 4170516 GCAGTCAATCCATAA GCGAGCC ATCAG GGCTCGC TTTTTTTATCAACAG Shew185_3506 4170675 - 4171664 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 4829 4171718 - 4171692 - f 100 -18.2 -3.57263 | overlap 4171679 ATCCTGACTGCTAAA GTGAGGCTTCAA CGT TTGAAGCCTCAC AGAGAGAACTAAATA Shew185_3507 4171733 - 4172470 + | dienelactone hydrolase TERM 4830 4172770 - 4172741 - T 75 -10.1 -2.96031 | opp_overlap 4172739, overlap 4172737 4172740 GTTACCGCAAATAAG GTAGCACCTTAAC TAAG ATTTAGGTGCTAC AGCTTCTGTCAAGTT Shew185_3508 4173204 - 4172800 - | hypothetical protein TERM 4831 4173271 - 4173261 - H 91 -2.4 -6.09196 | TGTAAAACAAAAAAA CACG CTG CGGG CCCACATGGTTGAAC TERM 4832 4173941 - 4173954 + G 70 -8.1 -3.96148 | opp_overlap 4173941 4173939 CGAGGTCTTAAAAGA TGGCG CATC CGCCA TTTATGGTGCCGACG TERM 4833 4175578 - 4175590 + G 73 -7.7 -4.03234 | opp_overlap 4175577 4175578 GTTACGACAGCAAAG GGATG ACG CATCC TTTCTGTAGCGACGA Shew185_3509 4173447 - 4176161 + | TonB-dependent receptor Shew185_3510 4176239 - 4176964 + | PepSY-associated TM helix Shew185_3511 4176961 - 4177737 + | PepSY-associated TM helix domain-containing protein Shew185_3512 4178505 - 4177960 - | hypothetical protein Shew185_3513 4178612 - 4179355 + | spermine synthase TERM 4834 4179851 - 4179867 + G 81 -10.9 -3.6502 | overlap 4179854 TACTCACCCAAGGTT TAACGGC CGC GCCGTTA TTTGCCTCAGAGCTG TERM 4835 4179854 - 4179864 + G 73 -8.2 -3.96216 | overlap 4179851 TCACCCAAGGTTTAA CGGC CGC GCCG TTATTTGCCTCAGAG Shew185_3514 4179445 - 4180977 + | leucyl aminopeptidase TERM 4836 4181281 - 4181299 + F 100 -11.8 -5.28176 | opp_overlap 4181281 GAATTTATGCTTAAA GGGATATC ATT GATATCCC TTTTTTATGCCTGAG TERM 4837 4181299 - 4181281 - f 89 -11.8 -3.58269 | opp_overlap 4181281 GAATTTATGCTTAAA GGGATATC ATT GATATCCC TTTTTTATGCCTGAG TERM 4838 4181364 - 4181332 - f 70 -8.6 -3.34398 | overlap 4181330 4181333 TCCCGTCCTGAAATA CGTTGACATAAAGA GGACT TCTTTATGACAACA TCAAGTAACTCAAGC TERM 4839 4181363 - 4181333 - f 70 -9.9 -2.60496 | overlap 4181332 4181330 CCCGTCCTGAAATAC GTTGACATAAAGA GGACT TCTTTATGACAAC ATCAAGTAACTCAAG Shew185_3515 4181356 - 4181751 + | transposase TERM 4840 4181794 - 4181753 - f 74 -5 -4.82998 | opp_overlap 4181753 4181751 CCAAAGCAAAATAAA CCTCGCCGTTGCATGTCG CGCTGT CGGCATTTCACGGCAAGG TATTTATCAGGCTGT Shew185_3516 4181817 - 4182584 + | integrase catalytic region TERM 4841 4182581 - 4182561 - f 100 -12.6 -4.73682 | GTGCATAATAGAAAA GGCCAGCT ACTGG AGCTGGCC TAGAAACTGTCAACC Shew185_3517 4182876 - 4183445 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Shew185_3518 4183607 - 4185193 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 4842 4185218 - 4185245 + T 100 -15 -4.58685 | opp_overlap 4185209 4185221 4185224 ATTAAACGCATAAGC TAAGAAGCCAGC GCAA GCTGGCTTCTTG TTTTTAAGAGAATTT TERM 4843 4185242 - 4185221 - T 95 -14.5 -3.25361 | opp_overlap 4185218, overlap 4185209 4185224 AAACGCATAAGCTAA GAAGCCAGC GCAA GCTGGCTTC TTGTTTTTAAGAGAA TERM 4844 4185239 - 4185224 - T 80 -10.4 -3.75766 | opp_overlap 4185218, overlap 4185221 4185209 CGCATAAGCTAAGAA GCCAGC GCAA GCTGGC TTCTTGTTTTTAAGA Shew185_3519 4185444 - 4185259 - | hypothetical protein Shew185_3520 4185698 - 4185456 - | hypothetical protein Shew185_3521 4186173 - 4185751 - | GCN5-related N-acetyltransferase Shew185_3522 4187990 - 4186257 - | single-stranded-DNA-specific exonuclease RecJ TERM 4845 4186362 - 4186334 - G 73 -8.2 -3.93236 | CATCAAGCTTATAAA CGATACGAGCAT GGTGA ATGGTCGCATCG GGCCAAGTGTGTAAA TERM 4846 4187420 - 4187406 - G 73 -3.4 -4.93877 | TGTCATCAAATAAAA GGCGAC ACC GACACC GGCAATCGATTTACT TERM 4847 4188026 - 4188044 + r 80 -10.3 -3.74872 | opp_overlap 4188026 ATAAGATAACAAAAA GGTGAGC CTTAA GCTCACC TTTCGTGGGATAAAT TERM 4848 4188044 - 4188026 - R 100 -11 -5.31072 | opp_overlap 4188026 ATAAGATAACAAAAA GGTGAGCC TTA AGCTCACC TTTCGTGGGATAAAT Shew185_3523 4188801 - 4188076 - | thiol:disulfide interchange protein DsbC Shew185_3524 4189871 - 4188942 - | tyrosine recombinase XerD TERM 4849 4189885 - 4189863 - G 100 -8.5 -5.63504 | gap 1, opp_overlap 4189863 AACTCCATAAAAAAA CGGCGTCATC AAAT GAT-ACGCCG TTGATATTAACTTAA Shew185_3525 4191371 - 4189959 - | branched-chain amino acid transport system II carrier protein TERM 4850 4190842 - 4190832 - G 73 -5.4 -4.57569 | GGATGCGGGTAAAAA CATC ACA GATG CAGCCAATCCAACTA Shew185_3526 4191900 - 4192616 + | methyltransferase small Shew185_3527 4192853 - 4194112 + | ATP-dependent RNA helicase SrmB TERM 4851 4194139 - 4194153 + F 95 -8.5 -5.4833 | opp_overlap 4194139 AATAATCTAACTAAA GCCGC TATAT GCGGC TTTTTTATTACCTAA TERM 4852 4194153 - 4194139 - f 79 -8.5 -3.97659 | opp_overlap 4194139 AATAATCTAACTAAA GCCGC TATAT GCGGC TTTTTTATTACCTAA TERM 4853 4194495 - 4194507 + G 78 -7.7 -4.46669 | TGAAGACTCTACTGA GGAGA ACA TCTCC TTTATTAATTTTGCT Shew185_3528 4194476 - 4195687 + | RND family efflux transporter MFP subunit TERM 4854 4197014 - 4196980 - g 73 -5.1 -4.56597 | opp_overlap 4196990, overlap 4197011 CGCGGCGCGCAAAAA GTGG-CAATGCCCGCGA CCT TCG-GGGTATTAACCAC GATTGCGGCCTTTAT TERM 4855 4197789 - 4197769 - g 76 -2.3 -5.28942 | overlap 4197771 GAGTTGAAACAAAAA CTCGCCAGC TAT GAAGGCGTG TACGATATTGCCGAC TERM 4856 4198256 - 4198226 - g 77 -8.4 -4.17023 | gap 1 CCAAGTATCCTAAAA TCCAAACCG-CGC TGGATG GCGGCAGTTTGGA TGAACAGAATGCTAT Shew185_3529 4195687 - 4198878 + | acriflavin resistance protein TERM 4857 4198944 - 4198973 + F 79 -10.9 -3.14647 | opp_overlap 4198929 4198951, overlap 4198951 TCAATGTCTTGGACC TTAAAAAGAGAGC TTAG GCTCTCTTTTTTA TTGCCTGTGCTCACT TERM 4858 4198966 - 4198951 - f 88 -9 -4.62069 | opp_overlap 4198944 4198951 CTTGGACCTTAAAAA GAGAGC TTAG GCTCTC TTTTTTATTGCCTGT TERM 4859 4198951 - 4198966 + F 95 -9 -5.49234 | opp_overlap 4198951, overlap 4198944 CTTGGACCTTAAAAA GAGAGC TTAG GCTCTC TTTTTTATTGCCTGT Shew185_3530 4199129 - 4199836 + | radical SAM domain-containing protein TERM 4860 4201769 - 4201755 - g 73 -8.5 -3.80733 | TGTACCTTAGAACAA GCCGC CGAAC GCGGC CGAGGCACAGAGAAA TERM 4861 4201958 - 4201944 - g 79 -11.4 -3.2056 | AGTGACATCGACCAA CTGGCG AAC CGCCAG CAGGAAGTCGAAGTT Shew185_3531 4200027 - 4202264 + | putative diguanylate cyclase Shew185_3532 4203648 - 4202245 - | hypothetical protein Shew185_3533 4204305 - 4203742 - | hypothetical protein Shew185_3534 4205047 - 4204298 - | transcriptional regulator, CadC Shew185_3535 4206666 - 4205197 - | citrate transporter TERM 4862 4206887 - 4206859 - R 86 -11.9 -3.32832 | opp_overlap 4206859 4206866, overlap 4206866 TCCAAAAACAGCCAA TAAAAAAGCACCT CGA AGGTGCTTTTTTG TTTTAAATCAGTGTC TERM 4863 4206859 - 4206887 + r 100 -14.1 -4.20531 | opp_overlap 4206859 4206866, overlap 4206866 TCCAAAAACAGCCAA TAAAAAAGCACCT CGA AGGTGCTTTTTTG TTTTAAATCAGTGTC TERM 4864 4206866 - 4206880 + r 100 -10 -5.80951 | opp_overlap 4206866 4206859, overlap 4206859 ACAGCCAATAAAAAA GCACCT CGA AGGTGC TTTTTTGTTTTAAAT TERM 4865 4206880 - 4206866 - R 100 -10 -5.49234 | opp_overlap 4206859 4206866, overlap 4206859 ACAGCCAATAAAAAA GCACCT CGA AGGTGC TTTTTTGTTTTAAAT Shew185_3536 4207646 - 4206909 - | hypothetical protein TERM 4866 4207622 - 4207637 + g 85 -5.4 -5.32699 | opp_overlap 4207622 GTGCAGTCATTAATA GTGCTG CGGT CAGTAC TTTTTTCATGTTTAA TERM 4867 4207811 - 4207836 + r 75 -10.5 -3.04144 | opp_overlap 4207817, overlap 4207817 GCTATTTCATCCATA AAAAAACCCGC ATCA GCGGGTTTTTG TCTTAACGATAACGC TERM 4868 4207817 - 4207830 + r 93 -9.5 -5.0916 | opp_overlap 4207817, overlap 4207811 TCATCCATAAAAAAA CCCGC ATCA GCGGG TTTTTGTCTTAACGA TERM 4869 4207830 - 4207817 - R 100 -9.5 -5.64274 | opp_overlap 4207817 4207811 TCATCCATAAAAAAA CCCGC ATCA GCGGG TTTTTGTCTTAACGA Shew185_3537 4208919 - 4207852 - | fructose-1,6-bisphosphate aldolase TERM 4870 4208453 - 4208492 + g 71 -8.6 -3.66654 | opp_overlap 4208477 CCAATACCGTCTTCT TCGCCTGCTTGGCCAGTT TCTA AACTGCCTAAACAGCCGA TTTCGCCTTCAACTG TERM 4871 4209129 - 4209154 + r 76 -7.6 -4.15106 | gap 1, overlap 4209132 GATGATATCAGAGCT TATCGCGGCGT CTTAT GCGCCGCG-TA TTTTAAAACTTAATA TERM 4872 4209132 - 4209152 + r 89 -11.8 -3.67 | overlap 4209129 GATATCAGAGCTTAT CGCGGCGT CTTAT GCGCCGCG TATTTTAAAACTTAA Shew185_3538 4210346 - 4209171 - | phosphoglycerate kinase Shew185_3539 4211557 - 4210484 - | erythrose 4-phosphate dehydrogenase TERM 4873 4211529 - 4211556 + g 73 -9.8 -3.33261 | opp_overlap 4211531, overlap 4211530 TCCTCTAAATACAAA AACGGCCTGCAA AAGA TTGCAGGCCGCA TTATACAGATTAACA TERM 4874 4211530 - 4211555 + g 84 -13.3 -2.59742 | opp_overlap 4211531, overlap 4211529 CCTCTAAATACAAAA ACGGCCTGCAA AAGA TTGCAGGCCGC ATTATACAGATTAAC TERM 4875 4211554 - 4211531 - G 100 -16.8 -5.19879 | opp_overlap 4211530 4211529 CTCTAAATACAAAAA CGGCCTGCAA AAGA TTGCAGGCCG CATTATACAGATTAA Shew185_3540 4213611 - 4211617 - | transketolase TERM 4876 4211996 - 4212012 + g 70 -9.5 -3.14931 | opp_overlap 4211993 4211990 AGTACATAAGCACCT TTAGCCA CGT TGGCTAA TTGCTCAGCGGTACG TERM 4877 4213306 - 4213322 + g 71 -4.3 -4.67011 | overlap 4213307 4213308 TGGGGTGTAACCGTA TTCTGGG TGA CCCGGGG TTTTTGAATGCAATT Shew185_3541 4214012 - 4215163 + | S-adenosylmethionine synthetase TERM 4878 4215227 - 4215198 - f 90 -10.9 -4.1964 | opp_overlap 4215206, overlap 4215206 GTTAAGATTGCAAAA TATAAAAACCGCT ACCC AGCGGTTTTTTTA TGCCTGCAATTTGGT TERM 4879 4215219 - 4215206 - f 91 -8.1 -5.28983 | opp_overlap 4215206, overlap 4215198 TGCAAAATATAAAAA CCGCT ACCC AGCGG TTTTTTTATGCCTGC TERM 4880 4215206 - 4215219 + F 100 -8.1 -5.64274 | opp_overlap 4215206 4215198 TGCAAAATATAAAAA CCGCT ACCC AGCGG TTTTTTTATGCCTGC TERM 4881 4215416 - 4215404 - f 76 -9.1 -3.65522 | CATGGATGTGAATAA GCGAC CAT GTCGC CAACGGTCACTGGTA TERM 4882 4216417 - 4216403 - g 80 -7.2 -4.62203 | overlap 4216412 GTTAAAGAAGCAAAA TTTGAG GAA CTCAAA TTGAGAAATCTTGCA Shew185_3542 4215707 - 4217023 + | hypothetical protein Shew185_3543 4217401 - 4217805 + | GCN5-related N-acetyltransferase Shew185_3544 4218194 - 4217844 - | hypothetical protein TERM 4883 4217907 - 4217922 + g 93 -7.5 -5.47159 | opp_overlap 4217907 4217906 CTCTTGGGATAAAAT GGCGC ACTCCA GCGCC TTTTTTGTATTCACG Shew185_3545 4218817 - 4218275 - | acetyltransferase TERM 4884 4219059 - 4219037 - g 81 -12.8 -2.63382 | overlap 4219036 4219039 CTTGATAGCGACAAT CAGCAAGTGA ATC TCACTCGCTG GATGCACCAATGTGA TERM 4885 4219202 - 4219179 - g 75 -11.8 -2.63636 | gap 1, overlap 4219169 4219176 4219175 4219172 AAACACCACAATTTA CTGCG-GGTAC TTT GTACCCCGCAG AACTCGAACTTTTTC Shew185_3546 4218986 - 4220002 + | putative diguanylate cyclase Shew185_3547 4220332 - 4220102 - | hypothetical protein Shew185_3548 4220404 - 4220820 + | protein of unknown function DUF306 Meta and HslJ TERM 4886 4220885 - 4220897 + T 100 -10.5 -5.26875 | opp_overlap 4220885 GTCCGCATAAAAAAA CCGCC ATT GGCGG TTTTTTAGTTCCACA TERM 4887 4220897 - 4220885 - T 100 -10.5 -5.60993 | opp_overlap 4220885 GTCCGCATAAAAAAA CCGCC ATT GGCGG TTTTTTAGTTCCACA Shew185_3549 4222265 - 4220931 - | sodium:dicarboxylate symporter TERM 4888 4221203 - 4221193 - G 73 -8.2 -3.80573 | GTCAGCATCACTAAA CCCG CAC CGGG CACACCCGCAGTGCC TERM 4889 4221524 - 4221492 - G 88 -7.1 -5.01732 | gap 1 AATGCCTTTAAAAAA CTGCAGCGGACTTA ACTTCG CAAATCCGC-GCAG TAAAAAACTATAGAA Shew185_3550 4222774 - 4222475 - | hypothetical protein TERM 4890 4222673 - 4222659 - G 71 -5 -4.61873 | CCCCATAAACCAAAA CTCAAC AAA GTTAAG ATAAAATGCAGTCGA TERM 4891 4223331 - 4223303 - g 73 -7.4 -4.22214 | gap 1, opp_overlap 4223318, overlap 4223300 AGTGAGGTAAAACAA CTGGCCGAAGCCA ATGG TGGCGCCG-CCAG CTTCCGTTTATATGT Shew185_3551 4222988 - 4223431 + | GCN5-related N-acetyltransferase TERM 4892 4223484 - 4223462 - T 100 -13.4 -5.52023 | opp_overlap 4223462 ATTAGCAATAAAAAA GGATCGGGCC AAT GGCACGATCC TTTTTTTACGAGTCA TERM 4893 4223462 - 4223484 + T 100 -13.4 -5.42259 | opp_overlap 4223462 ATTAGCAATAAAAAA GGATCGGGCC AAT GGCACGATCC TTTTTTTACGAGTCA Shew185_3552 4224854 - 4223559 - | aromatic amino acid permease TERM 4894 4225279 - 4225247 - R 100 -9.3 -5.63504 | gap 1, overlap 4225235 4225276 AACGCCATAAAAAAA CGGCTCA-TCCGAA TTCAAC TTCGAAGTGAGCCG TTAACGATTAACGCA Shew185_3553 4227868 - 4225304 - | peptidase S45 penicillin amidase TERM 4895 4228158 - 4228140 - g 71 -3.8 -4.71186 | overlap 4228141 ATTATCAAGATAAAA GTGGGTTC TAA AAACCCAG TAAAAATCAACGCGG TERM 4896 4228589 - 4228554 - g 83 -3.8 -5.37171 | overlap 4228555 AATATCAAACAAAAA GGCGGTGCCATAGGTC TGCT AACCCACGGCCACGCG ACCCGTGAAAGTAAT Shew185_3554 4228113 - 4228673 + | NTPase Shew185_3555 4228678 - 4229727 + | MarR family transcriptional regulator TERM 4897 4230325 - 4230309 - T 83 -7.2 -4.66609 | overlap 4230296 CATGGCAGCGAAAAA CGCCGC ACATG GCAGCG AAAAACGCCGCACAT TERM 4898 4230344 - 4230331 - T 74 -5.2 -4.66609 | CATGGCAGCGAAAAA CGCC GCACAT GGCG CAAGTTGCACTTAGC Shew185_3557 4231942 - 4231070 - | hypothetical protein TERM 4899 4231863 - 4231844 - G 71 -9.3 -3.49837 | opp_overlap 4231842, overlap 4231842 TACAGAATCTAAATA CTCCCCA TTTGCT TGGGGAG ATGTAACTTGTGCAT Shew185_3558 4232596 - 4232991 + | hypothetical protein TERM 4900 4232998 - 4233023 + T 100 -16.3 -3.89354 | opp_overlap 4232998 AAGCAATAAACAAAA CTCGCGTTAAG TTAC CTTAACGCGAG TTGTTAGTTTCAAGC TERM 4901 4233023 - 4232998 - T 100 -16.3 -5.13527 | opp_overlap 4232998 AAGCAATAAACAAAA CTCGCGTTAAG TTAC CTTAACGCGAG TTGTTAGTTTCAAGC Shew185_3559 4234315 - 4233098 - | Na(+)-translocating NADH-quinone reductase subunit F Shew185_3560 4235001 - 4234393 - | Na(+)-translocating NADH-quinone reductase subunit E Shew185_3561 4235631 - 4235011 - | Na(+)-translocating NADH-quinone reductase subunit D Shew185_3562 4236434 - 4235628 - | Na(+)-translocating NADH-quinone reductase subunit C Shew185_3563 4237674 - 4236424 - | Na(+)-translocating NADH-quinone reductase subunit B Shew185_3564 4239047 - 4237674 - | Na(+)-translocating NADH-quinone reductase subunit A TERM 4902 4238025 - 4238015 - G 71 -6.8 -4.20516 | opp_overlap 4238021 CCCGTACCCAAGAAA GCAC ATG GTGC TGCGCATCTTCGCTC TERM 4903 4238605 - 4238576 - G 75 -3.4 -5.06414 | overlap 4238578 TTGCGGTAACAAAAA TCCCTGCGGGCG TGCTAT CGAGCGCAGGCA CGCGCGAGAAAGGCC TERM 4904 4238858 - 4238868 + g 76 -8.2 -4.08216 | opp_overlap 4238856 4238858 TTTTATCTTCAAACA GGGC TTG GCCC TTTTGAACCCAATCA TERM 4905 4240097 - 4240084 - g 75 -5.9 -4.58283 | opp_overlap 4240084 CAACTGGCCGAAAAA CACGG TTTG CCGCG TATTGTGAGTGTGCA TERM 4906 4240362 - 4240382 + G 73 -4.6 -4.67982 | opp_overlap 4240357, overlap 4240361 4240357 CGAGTTCAAACTCAC GCCAGCGC AAATG GCGTTAGC TTTTGTTAACTCACG Shew185_3565 4239502 - 4240542 + | aldo/keto reductase TERM 4907 4240590 - 4240625 + F 100 -15 -3.91911 | opp_overlap 4240590 AAGTCGTTTGAATAA TCAATAGCATCAGG CCAATCCC CCTGATGCTATTGA TTTCATTCAGCTCAA TERM 4908 4240625 - 4240590 - f 100 -15 -3.61894 | opp_overlap 4240590 AAGTCGTTTGAATAA TCAATAGCATCAGG CCAATCCC CCTGATGCTATTGA TTTCATTCAGCTCAA TERM 4909 4241037 - 4241047 + G 74 -6.8 -4.38712 | GCGCAGGTGTTGCTA CTGG CAG CCAG TTTTATAAGGGTCAA Shew185_3566 4240904 - 4241677 + | MltA-interacting MipA family protein Shew185_3567 4241699 - 4242157 + | hypothetical protein TERM 4910 4242201 - 4242170 - T 100 -18.2 -3.91798 | gap 1, opp_overlap 4242171 4242173, overlap 4242173 TAATTGCGAATCAAA CGAGCACCAGCCTAG CTC CTAGGCTGGTGCT-G TTTTATCGCTACATC TERM 4911 4242171 - 4242201 + T 100 -18.4 -4.431 | opp_overlap 4242170 4242173, overlap 4242173 AATTGCGAATCAAAC GAGCACCAGCCTAG CTC CTAGGCTGGTGCTG TTTTATCGCTACATC TERM 4912 4242173 - 4242199 + T 100 -21 -3.82117 | opp_overlap 4242170 4242173, overlap 4242171 TTGCGAATCAAACGA GCACCAGCCTAG CTC CTAGGCTGGTGC TGTTTTATCGCTACA TERM 4913 4242199 - 4242173 - T 100 -21 -3.02166 | opp_overlap 4242173 4242171, overlap 4242170 TTGCGAATCAAACGA GCACCAGCCTAG CTC CTAGGCTGGTGC TGTTTTATCGCTACA Shew185_3568 4243682 - 4242384 - | integral membrane sensor signal transduction histidine kinase Shew185_3569 4244383 - 4243679 - | two component transcriptional regulator Shew185_3570 4244768 - 4244385 - | hypothetical protein Shew185_3571 4245624 - 4244779 - | MltA-interacting MipA family protein Shew185_3572 4246079 - 4246375 + | hypothetical protein TERM 4914 4246758 - 4246724 - g 73 -3.5 -4.87665 | gap 1 TTTCACTGACAAAAA CGGCGATG-GAAAACA TTGT CGTGACCGCATCGCCG CTCGCCCGCTCTGCG TERM 4915 4247484 - 4247474 - g 77 -4.6 -4.92385 | TAGATTTAAAGAAAA CCGC ATG GCAG CTGCACAGTGGTTTG TERM 4916 4248674 - 4248651 - g 73 -9.6 -3.40597 | opp_overlap 4248651, overlap 4248649 CTCGTTACTCAAAGA TTACGCCCCA CTGA TGGGACGCAA CTTTATGTTAGGTGT Shew185_3573 4246429 - 4248705 + | TonB-dependent receptor plug TERM 4917 4248744 - 4248762 + T 100 -13.2 -5.29885 | opp_overlap 4248744 TAAGTTAAGCCCAAA GCGAAGTC CTA GACTTCGC TTTTATTTTTCAATT TERM 4918 4248762 - 4248744 - T 95 -13.2 -3.67864 | opp_overlap 4248744 TAAGTTAAGCCCAAA GCGAAGTC CTA GACTTCGC TTTTATTTTTCAATT Shew185_3574 4250476 - 4248776 - | methyl-accepting chemotaxis sensory transducer Shew185_3575 4250824 - 4252161 + | SufS subfamily cysteine desulfurase Shew185_3576 4252259 - 4252705 + | Fe-S metabolism associated SufE Shew185_3577 4252903 - 4254069 + | peptidase M19 renal dipeptidase TERM 4919 4254739 - 4254749 + G 77 -8.2 -4.15453 | TTCGCGACAGTATTC GCGC ATG GCGC TTTTACGATCACTTC Shew185_3578 4254153 - 4255325 + | hypothetical protein TERM 4920 4256522 - 4256498 - g 71 -8.6 -3.73775 | GTGACTTTCACCAAA CCGAATTCGA CCGCC TCGAAATCGG CAATCAATCCCCTTT TERM 4921 4256941 - 4256927 - g 80 -8.6 -4.42464 | AACTCGGCAAACAAA CATGGT ACG ACCATG AGGGCAAGAAAACGC Shew185_3580 4256188 - 4258704 + | hypothetical protein Shew185_3581 4259236 - 4258862 - | hypothetical protein Shew185_3582 4261353 - 4259437 - | peptidase U32 TERM 4922 4259637 - 4259647 + g 77 -4.6 -4.9218 | TCAATGGCACGTCTT CGGT GAC GCCG TTTTTCTCATAGGTA TERM 4923 4260653 - 4260675 + g 72 -10.8 -2.57274 | overlap 4260652 4260650 AGGTTTTCGGTTTGG TTATTGTCTT TTA AAGACAATAA ATGTTCATTCTGCGC Shew185_3583 4261570 - 4262247 + | pseudouridine synthase Shew185_3584 4262310 - 4262804 + | DNA-binding transcriptional regulator AsnC TERM 4924 4263172 - 4263159 - g 80 -6.7 -4.81685 | AGTAATGAGCAAAAA CAAGC TGTT GCTTG GATGATAAGACTTAA TERM 4925 4263294 - 4263281 - g 70 -2.4 -4.88222 | ATCAAAAGTTAAAAA TGCT ATTCAG AGCA TGGATGCCGATATTA Shew185_3585 4263009 - 4266647 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 4926 4266691 - 4266663 - f 81 -11.8 -2.69849 | opp_overlap 4266668, overlap 4266668 CAAGAAGTTAAACAG TAAAAGGGAGCC TTAAT GGCTCCCTTTTT ATTCTGCTCTGTTCC TERM 4927 4266668 - 4266686 + F 100 -11.7 -5.2291 | opp_overlap 4266663 4266668 AGTTAAACAGTAAAA GGGAGCC TTAAT GGCTCCC TTTTTATTCTGCTCT TERM 4928 4266686 - 4266668 - f 95 -11.7 -4.50358 | opp_overlap 4266668, overlap 4266663 AGTTAAACAGTAAAA GGGAGCC TTAAT GGCTCCC TTTTTATTCTGCTCT TERM 4929 4266750 - 4266718 - f 70 -8.6 -3.34398 | overlap 4266716 4266719 TTCCGTCCTGAAATA CGTTGACATAAAGA GGACT TCTTTATGACAACA TCAAGTAACTCAAGC TERM 4930 4266749 - 4266719 - f 70 -9.9 -2.60496 | overlap 4266718 4266716 TCCGTCCTGAAATAC GTTGACATAAAGA GGACT TCTTTATGACAAC ATCAAGTAACTCAAG Shew185_3586 4266742 - 4267137 + | transposase TERM 4931 4267800 - 4267814 + G 71 -4.2 -4.8048 | overlap 4267801 GAAAGAGTAAACGGG ATCCTG AAG CAGGAG TTTTTACTCTACCGG Shew185_3587 4267203 - 4267970 + | integrase catalytic region TERM 4932 4267967 - 4267947 - T 100 -12.6 -4.73682 | GTGCATAATAGAAAA GGCCAGCT ACTGG AGCTGGCC TAGAAACTGTCAACC Shew185_3588 4268787 - 4268017 - | ABC-2 type transporter Shew185_3589 4269722 - 4268784 - | ABC transporter related TERM 4933 4269913 - 4269885 - R 95 -14 -3.40689 | opp_overlap 4269890, overlap 4269890 TATAACCGTAAAAAG CAAAACTCCCGC CTGTT GCGGGAGTTTTA AACGGTATCGGACAC TERM 4934 4269890 - 4269908 + r 91 -11.7 -4.10657 | opp_overlap 4269885 4269890 CCGTAAAAAGCAAAA CTCCCGC CTGTT GCGGGAG TTTTAAACGGTATCG TERM 4935 4269908 - 4269890 - R 100 -11.7 -4.77757 | opp_overlap 4269890, overlap 4269885 CCGTAAAAAGCAAAA CTCCCGC CTGTT GCGGGAG TTTTAAACGGTATCG Shew185_3590 4270459 - 4269929 - | hypoxanthine phosphoribosyltransferase Shew185_3591 4271126 - 4270467 - | aromatic acid decarboxylase Shew185_3592 4272519 - 4271128 - | UDP-N-acetylmuramate TERM 4936 4271730 - 4271719 - G 73 -2.2 -5.14563 | overlap 4271728 CTCGCCATCAAAAAA CACT TCAA AGCG ATGGCAATCATCACT Shew185_3593 4273605 - 4272967 - | hypothetical protein Shew185_3594 4274641 - 4273775 - | sterol desaturase family protein Shew185_3595 4275815 - 4274784 - | hypothetical protein TERM 4937 4275597 - 4275564 - G 93 -8.2 -5.05116 | gap 1, overlap 4275584 GTATAAATAACAAAA CGCAC-TGCCGACGT AAGCA ATATCGGCAAGTGCG ATACCAAGGACATAA TERM 4938 4276007 - 4275994 - R 100 -9.5 -5.50313 | opp_overlap 4275994 TATAAAACGAAAAAA GCGCC CAAA GGCGC TTTAATGCTAGATGC TERM 4939 4275994 - 4276007 + r 83 -9.5 -3.79747 | opp_overlap 4275994 TATAAAACGAAAAAA GCGCC CAAA GGCGC TTTAATGCTAGATGC Shew185_3596 4276861 - 4276298 - | OmpA domain-containing protein Shew185_3597 4277008 - 4277574 + | hypothetical protein Shew185_3598 4277604 - 4278188 + | peptidyl-prolyl cis-trans isomerase cyclophilin type Shew185_3599 4278262 - 4278582 + | hypothetical protein TERM 4940 4278609 - 4278626 + F 100 -12.7 -5.60993 | opp_overlap 4278608 4278607 CTATCGATAGAAATT GGCCCTG TTAT CAGGGCC TTTTTTTATCGCGCA Shew185_3600 4278893 - 4280308 + | major facilitator transporter TERM 4941 4280366 - 4280343 - T 100 -16.8 -5.49569 | opp_overlap 4280343 CATCAATATAAAAAA GCCCTCACAC CTTA GTGTGAGGGC TTTTACATTTAAAGA TERM 4942 4280343 - 4280366 + T 100 -16.8 -4.35524 | opp_overlap 4280343 CATCAATATAAAAAA GCCCTCACAC CTTA GTGTGAGGGC TTTTACATTTAAAGA Shew185_3601 4280915 - 4280430 - | nucleotide-binding protein Shew185_3602 4281071 - 4281433 + | VanZ family protein Shew185_3603 4281483 - 4282418 + | 2-dehydropantoate 2-reductase TERM 4943 4282644 - 4282660 + F 75 -9.5 -3.40775 | overlap 4282642 GTTTTGCACCGTTTT GCATCAA TCC TTGATGC TATTTCGGTGCGACT Shew185_3604 4282770 - 4283108 + | nitrogen regulatory protein P-II Shew185_3605 4283105 - 4284418 + | ammonium transporter TERM 4944 4284449 - 4284493 + T 100 -13 -3.80573 | gap 1, opp_overlap 4284457 4284461 4284464, overlap 4284453 4284461 ACTTAAGCTATAACG CTTGAACAGCAATAAGGGCAC CTAG GTGCCCTTATTGCTGA-CTGG TTTGATGATACTAAC TERM 4945 4284453 - 4284490 + T 100 -15.7 -2.98761 | opp_overlap 4284457 4284461 4284464, overlap 4284449 4284461 AAGCTATAACGCTTG AACAGCAATAAGGGCAC CTAG GTGCCCTTATTGCTGAC TGGTTTGATGATACT TERM 4946 4284486 - 4284457 - T 100 -19.5 -3.04799 | opp_overlap 4284453 4284449 4284461, overlap 4284461 4284464 TATAACGCTTGAACA GCAATAAGGGCAC CTAG GTGCCCTTATTGC TGACTGGTTTGATGA TERM 4947 4284461 - 4284482 + T 91 -13.1 -3.2115 | opp_overlap 4284457 4284461 4284464, overlap 4284453 4284449 ACGCTTGAACAGCAA TAAGGGCAC CTAG GTGCCCTTA TTGCTGACTGGTTTG TERM 4948 4284482 - 4284461 - T 93 -13.1 -3.36452 | opp_overlap 4284461 4284453 4284449, overlap 4284457 4284464 ACGCTTGAACAGCAA TAAGGGCAC CTAG GTGCCCTTA TTGCTGACTGGTTTG TERM 4949 4284479 - 4284464 - T 84 -10.4 -3.82084 | opp_overlap 4284461 4284453 4284449, overlap 4284461 4284457 CTTGAACAGCAATAA GGGCAC CTAG GTGCCC TTATTGCTGACTGGT Shew185_3606 4286024 - 4284504 - | diguanylate phosphodiesterase TERM 4950 4284690 - 4284671 - G 79 -10.8 -3.53444 | TCATCTTGTGGGAAA GCTCGATA ATAG TATCGAGC ACATGGGAAGTGACA TERM 4951 4285637 - 4285627 - G 80 -8.2 -4.42653 | ACCTCAGGCATAAAA GGCG TGC CGCC AATAATAAACTGGTT TERM 4952 4285977 - 4285997 + g 70 -9.7 -3.14148 | overlap 4285976 AAACAATATCACTGC CAGCCATTG CCA CAATGGCAG ATTTAATTTTGCTAT Shew185_3607 4287070 - 4286198 - | hypothetical protein TERM 4953 4287219 - 4287193 - R 100 -16.7 -4.56597 | opp_overlap 4287190 4287197 4287211, overlap 4287197 GTTTCTGCTGAAAAA CAAAGCCCCGA ACGAG TCGGGGCTTTG AGATTTAATCACTAA TERM 4954 4287197 - 4287215 + r 89 -11.7 -3.73107 | opp_overlap 4287193 4287197, overlap 4287190 4287211 CTGCTGAAAAACAAA GCCCCGA ACGAG TCGGGGC TTTGAGATTTAATCA TERM 4955 4287215 - 4287197 - R 100 -11.7 -4.85782 | opp_overlap 4287197 4287190 4287211, overlap 4287193 CTGCTGAAAAACAAA GCCCCGA ACGAG TCGGGGC TTTGAGATTTAATCA Shew185_3608 4288113 - 4287265 - | 2-dehydro-3-deoxyphosphooctonate aldolase Shew185_3609 4289425 - 4288178 - | hypothetical protein TERM 4956 4289442 - 4289455 + r 78 -2.5 -5.42605 | overlap 4289438 CTAATTTCTCCCTGT TAATA CAGT TATTA TTTTATTTTTATTAG TERM 4957 4289575 - 4289560 - R 73 -6.8 -4.15703 | opp_overlap 4289560 4289557 GTTGATAAATAAGAA GAGCCC CGAA AGGCTC TGCTTTAATGGTAAA Shew185_3610 4290368 - 4289580 - | hypothetical protein TERM 4958 4289685 - 4289671 - G 72 -5.7 -4.42386 | overlap 4289672 4289680 4289683 CTGTTATCGACAAAA TGCTG CAAAT CAGCA GCGGCCACATTGATA Shew185_3611 4290763 - 4290368 - | invasion gene expression up-regulator SirB Shew185_3612 4290883 - 4291296 + | GCN5-related N-acetyltransferase TERM 4959 4291381 - 4291358 - T 100 -13.2 -5.54907 | opp_overlap 4291358 TTTAGAAAACAAAAA CGCCATTGGC AATA ACCAATGGCG TTCGATAAATCGGTA TERM 4960 4291358 - 4291381 + T 84 -12.5 -3.08133 | opp_overlap 4291358 TTTAGAAAACAAAAA CGCCATTGG CAATAA CCAATGGCG TTCGATAAATCGGTA Shew185_3613 4292279 - 4291431 - | HemK family modification methylase TERM 4961 4292218 - 4292189 - G 83 -8.6 -4.49167 | opp_overlap 4292189 AATATAACAGCAAAA CCTCTGCATCCA GATGAG CGGATTCAGAGG TTGATGCTAACTGCA Shew185_3614 4293373 - 4292282 - | peptide chain release factor 1 TERM 4962 4292500 - 4292512 + g 77 -4.7 -4.87626 | GACGGGTCGATTCTT CGGCG CTA CGGCG TTTTTCGTCTTCAAC Shew185_3615 4294638 - 4293388 - | glutamyl-tRNA reductase Shew185_3616 4294892 - 4295536 + | outer membrane lipoprotein LolB TERM 4963 4295727 - 4295747 + G 75 -10.5 -3.44146 | TCCAATATGTCGGGC GTTGTCGCT GAC AGCGATAAC TTAATTCTGCGAGCC Shew185_3617 4295538 - 4296392 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Shew185_3618 4296505 - 4297452 + | ribose-phosphate pyrophosphokinase TERM 4964 4297586 - 4297557 - T 84 -12.3 -2.93435 | opp_overlap 4297557 4297563, overlap 4297563 CTAATCACTCAGACA TAAAAACGCACTC CTCG GAGTGCGTTTTTG TTAGTGTATTTTCTA TERM 4965 4297557 - 4297586 + T 100 -14.5 -3.4791 | opp_overlap 4297557 4297563, overlap 4297563 CTAATCACTCAGACA TAAAAACGCACTC CTCG GAGTGCGTTTTTG TTAGTGTATTTTCTA TERM 4966 4297563 - 4297580 + T 95 -11.3 -5.17744 | opp_overlap 4297563 4297557, overlap 4297557 ACTCAGACATAAAAA CGCACTC CTCG GAGTGCG TTTTTGTTAGTGTAT TERM 4967 4297580 - 4297563 - T 95 -11.3 -5.04597 | opp_overlap 4297557 4297563, overlap 4297557 ACTCAGACATAAAAA CGCACTC CTCG GAGTGCG TTTTTGTTAGTGTAT Shew185_3619 4299505 - 4297643 - | methyl-accepting chemotaxis sensory transducer TERM 4968 4298819 - 4298833 + g 73 -10 -3.32294 | overlap 4298831 CATAGTGCCATCTTT CTCGGT TAA ACCGAG TTGCTGCTCTTTATT Shew185_3620 4299944 - 4300477 + | ECF subfamily RNA polymerase sigma-24 factor Shew185_3621 4300477 - 4301061 + | hypothetical protein Shew185_3622 4301058 - 4302014 + | hypothetical protein TERM 4969 4302071 - 4302044 - T 100 -16.4 -5.16841 | gap 1, opp_overlap 4302044 TCACACCAATAAAAA TGCCGCCACGAGT CAA ACTCG-GGCGGCA TTTCTGTAGATTCCT TERM 4970 4302044 - 4302071 + T 100 -16.4 -4.09509 | gap 1, opp_overlap 4302044 TCACACCAATAAAAA TGCCGCCACGAGT CAA ACTCG-GGCGGCA TTTCTGTAGATTCCT Shew185_3623 4302831 - 4302091 - | pseudouridine synthase Shew185_3624 4302921 - 4303475 + | nodulation protein L Shew185_3625 4303845 - 4305809 + | endothelin-converting protein 1 TERM 4971 4305882 - 4305856 - f 75 -8.1 -3.99374 | opp_overlap 4305856 GCTGAGCAACAACAA TGGCGCTCA-CTG TCA CAGGTG-GCGCCA TTTTTTTTGGCTAAA TERM 4972 4305856 - 4305882 + F 100 -8.6 -5.81412 | opp_overlap 4305856 GCTGAGCAACAACAA TGGCGCTCACTG TCA CAGGTGGCGCCA TTTTTTTTGGCTAAA TERM 4973 4306516 - 4306506 - g 76 -2.4 -5.19879 | overlap 4306498 4306507 4306508 GGTGAAACAGAAAAA CCGC TTT GCTG AGCCCAAAGCATCTG Shew185_3626 4306036 - 4306821 + | hypothetical protein TERM 4974 4306843 - 4306871 + F 100 -11 -5.36314 | gap 1 ACCGCTTCCACTGTT GCGCTGGTCTCCT GCAA AGGTG-CCAGCGC TTTTTTAATATTTTA Shew185_3627 4306996 - 4307403 + | hypothetical protein Shew185_3628 4307434 - 4307934 + | hypothetical protein TERM 4975 4307975 - 4307996 + T 100 -13.1 -5.16133 | opp_overlap 4307975 TCGCATTAACAGTAA GGGCAGATA TCAC TATCTGCCC TTTTTATATTCTCAT TERM 4976 4307996 - 4307975 - T 93 -13.1 -3.39449 | opp_overlap 4307975 TCGCATTAACAGTAA GGGCAGATA TCAC TATCTGCCC TTTTTATATTCTCAT Shew185_3629 4308715 - 4308083 - | glutathione S-transferase domain-containing protein TERM 4977 4308815 - 4308799 - R 100 -10.8 -5.24129 | opp_overlap 4308799 TCTGCCCATAAAAAA CGGCGC TTAAT GCGCCG TTTCGATTTCACTAC TERM 4978 4308799 - 4308815 + r 86 -10.8 -3.85909 | opp_overlap 4308799 TCTGCCCATAAAAAA CGGCGC TTAAT GCGCCG TTTCGATTTCACTAC Shew185_3630 4311445 - 4308860 - | TonB-dependent receptor TERM 4979 4312113 - 4312094 - g 76 -2.1 -5.22006 | gap 1 GTATTAGAACAAAAA GAGCGTCT TACTC AG-CGCCC ACATCCAGCGAGTCC Shew185_3631 4311689 - 4312228 + | membrane-flanked domain-containing protein TERM 4980 4313485 - 4313496 + G 74 -4.4 -4.93547 | TGATTTTGGCCTTTA TGAC CACA GTCA TTTTTGCTTGGTTGA Shew185_3632 4312380 - 4313654 + | putative manganese transporter Shew185_3633 4313799 - 4314269 + | hypothetical protein TERM 4981 4314312 - 4314297 - f 84 -10.4 -3.83026 | opp_overlap 4314297 GTTTGTCACATCAAA CGCAGC TTAG GCTGCG TTTTTTTATATCCAA TERM 4982 4314297 - 4314312 + F 100 -10.4 -5.71712 | opp_overlap 4314297 GTTTGTCACATCAAA CGCAGC TTAG GCTGCG TTTTTTTATATCCAA TERM 4983 4315617 - 4315598 - g 88 -8.6 -4.7373 | CCATTCCAGCAAAAA TTGGCGCA GAAA TGCACCAA TATCCAAAACTGGAG TERM 4984 4316210 - 4316183 - g 70 -10 -3.20878 | gap 1, overlap 4316188 CAACAGTCAATTGAA GGCAAT-TTCTGG AGT CCAGAATATCGCC GCTACAAACGCACTT Shew185_3634 4314545 - 4316233 + | malate dehydrogenase TERM 4985 4316234 - 4316271 + T 95 -13.6 -3.66095 | gap 2, opp_overlap 4316239 4316256, overlap 4316237 CGCACTTCGTTCTAA GCATAGCGTTGCCGCGAC TTAA GTCGTGGCAACGC-A-GC TTTAACTCAACGTTT TERM 4986 4316237 - 4316270 + T 95 -15.3 -2.79175 | opp_overlap 4316239 4316256, overlap 4316234 ACTTCGTTCTAAGCA TAGCGTTGCCGCGAC TTAA GTCGTGGCAACGCAG CTTTAACTCAACGTT TERM 4987 4316268 - 4316239 - T 100 -17.9 -2.90075 | opp_overlap 4316237 4316234, overlap 4316256 TTCGTTCTAAGCATA GCGTTGCCGCGAC TTAA GTCGTGGCAACGC AGCTTTAACTCAACG TERM 4988 4316300 - 4316323 + T 100 -16.8 -5.0925 | opp_overlap 4316300 TTGTAACAGCAAAAA GCCCGTCACT GCAA AGTGACGGGC TTTTTGATTTTCAGA TERM 4989 4316323 - 4316300 - T 100 -16.8 -4.87626 | opp_overlap 4316300 TTGTAACAGCAAAAA GCCCGTCACT GCAA AGTGACGGGC TTTTTGATTTTCAGA Shew185_3635 4316796 - 4316362 - | hypothetical protein Shew185_3636 4317357 - 4316833 - | phosphoesterase PA-phosphatase related TERM 4990 4318324 - 4318314 - g 83 -6.8 -4.88736 | opp_overlap 4318315, overlap 4318315 CATCAGCTAGAAAAA GTGG CCG CCAC CATGGCGACGGACAT TERM 4991 4318667 - 4318656 - g 73 -2.2 -5.14563 | GCCCTCACCAAAAAA GTCG ATGA CAAC TCTTTCTCCCATCAA Shew185_3637 4317417 - 4319435 + | diguanylate cyclase Shew185_3638 4320229 - 4319432 - | extracellular solute-binding protein TERM 4992 4320914 - 4320903 - g 80 -7.2 -4.63527 | CCATTAGCCGAAAAA GCCG GTAT CGGC TGGACAGGTAAGCAC Shew185_3639 4320405 - 4321607 + | putative iron-sulfur cluster binding protein TERM 4993 4321763 - 4321736 - T 100 -18.6 -4.15396 | opp_overlap 4321736 TTGCAAATGAAACAA GACAACGGATGC ATCA GCATCCGTTGTC TTTTTACTCATTAAG TERM 4994 4321736 - 4321763 + T 100 -18.6 -4.81083 | opp_overlap 4321736 TTGCAAATGAAACAA GACAACGGATGC ATCA GCATCCGTTGTC TTTTTACTCATTAAG Shew185_3640 4324081 - 4321811 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 4995 4322971 - 4322955 - G 83 -6.5 -4.99035 | opp_overlap 4322955 CGAGCGATACAAAAA GCACTGA TTT TCTGTGC TTCATCCGAACTAGG TERM 4996 4323678 - 4323665 - G 74 -3.1 -5.15634 | overlap 4323666 GACTTCATCAAAAAA CTGCT CGTA AGCAA TCGAAAACTCTTGGT Shew185_3641 4324282 - 4325187 + | LysR family transcriptional regulator TERM 4997 4325232 - 4325204 - T 85 -11.2 -3.28765 | gap 1, opp_overlap 4325205 4325211, overlap 4325211 ACAGGTGAAACCTAA CAAAAAAGCCTGC TGAT GCAGGC-TTTTTG TTGAATCTAATGACT TERM 4998 4325205 - 4325232 + T 82 -11.4 -3.14647 | opp_overlap 4325204 4325211, overlap 4325211 CAGGTGAAACCTAAC AAAAAAGCCTGC TGAT GCAGGCTTTTTG TTGAATCTAATGACT TERM 4999 4325211 - 4325226 + T 93 -10.4 -5.12068 | opp_overlap 4325204 4325211, overlap 4325205 AAACCTAACAAAAAA GCCTGC TGAT GCAGGC TTTTTGTTGAATCTA TERM 5000 4325226 - 4325211 - T 100 -10.4 -5.52096 | opp_overlap 4325211 4325205, overlap 4325204 AAACCTAACAAAAAA GCCTGC TGAT GCAGGC TTTTTGTTGAATCTA Shew185_3642 4326015 - 4325287 - | putative signal transduction protein TERM 5001 4325903 - 4325913 + g 87 -6.8 -5.09225 | overlap 4325888 CGAATGTCGCCTTCA GCGA GGA TCGC TTTTTTGAGTGGAAT TERM 5002 4327620 - 4327610 - g 80 -4 -5.25656 | AAAACCATGAAAAAA TCAA CCA TTGA AACAGTAGAAACCAA Shew185_3643 4326704 - 4327918 + | hypothetical protein TERM 5003 4327957 - 4327930 - T 100 -11.4 -5.48303 | opp_overlap 4327921 4327930 ATAATTGCAAAAAAA GCAGCCTTTATA TTGA TTTAAAGGCTGC TAAATTCGCTCATTT TERM 5004 4327930 - 4327957 + T 79 -11.4 -2.56288 | opp_overlap 4327930, overlap 4327921 ATAATTGCAAAAAAA GCAGCCTTTATA TTGA TTTAAAGGCTGC TAAATTCGCTCATTT Shew185_3644 4329943 - 4327982 - | TonB-dependent receptor TERM 5005 4328919 - 4328901 - G 71 -7.4 -4.13014 | opp_overlap 4328901 GCCATAGTGTCAAAA TCAGCCTT ACC ACGGCTGA TGTCTAAGCCTGTGA Shew185_3645 4331090 - 4330422 - | hypothetical protein TERM 5006 4331293 - 4331236 - R 85 -8.6 -4.43397 | gap 1 CTTTAAAAGAAATAA TCACTGTCACGGCGTAAAT-AACAGAG AAATA CTCCGTTTATCTGCGCCGTGATGGTAA AAGAGGTGAATGCTA Shew185_3646 4332748 - 4331306 - | hypothetical protein TERM 5007 4332064 - 4332074 + g 70 -2.4 -4.90136 | opp_overlap 4332062, overlap 4332062 CAACATCCATTAACT GCGG CAG CAGC TTTTTCATATTGGTT TERM 5008 4333612 - 4333644 + G 81 -7.7 -4.65032 | opp_overlap 4333593 4333592 4333612 TCGCGCCATCCCAAA TCCAATTGCTCAGTG CGT CGCCGAGTTATTGGA TTTCTTTATGATTTA Shew185_3647 4332983 - 4333939 + | ribonucleoside hydrolase 1 Shew185_3648 4333959 - 4334870 + | ribokinase Shew185_3649 4335198 - 4335674 + | azurin TERM 5009 4335717 - 4335734 + T 93 -11.3 -4.27316 | opp_overlap 4335717 GATAAAAACAAAAAA GCGGATC TTAG GATCCGC TTTTACATTCCAGCC TERM 5010 4335734 - 4335717 - T 100 -11.3 -5.98675 | opp_overlap 4335717 GATAAAAACAAAAAA GCGGATC TTAG GATCCGC TTTTACATTCCAGCC Shew185_3650 4336958 - 4335774 - | hypothetical protein TERM 5011 4336562 - 4336552 - G 74 -6.8 -4.48299 | opp_overlap 4336552 TCATAGGCAAATAAA GGTG ACT CACC TTGCTGCCATGGGGT TERM 5012 4337235 - 4337202 - R 100 -16.9 -4.87665 | opp_overlap 4337204 4337209, overlap 4337204 4337209 GTTGAGCGACAAAAA CACAAAAGGCGGATC CTAA GATCCGCCTTTTGTT ATTTATAGCCAGAGT TERM 5013 4337233 - 4337204 - R 100 -19.5 -4.06182 | opp_overlap 4337204 4337209, overlap 4337202 4337209 TGAGCGACAAAAACA CAAAAGGCGGATC CTAA GATCCGCCTTTTG TTATTTATAGCCAGA TERM 5014 4337204 - 4337233 + r 100 -19.5 -4.06419 | opp_overlap 4337204 4337202 4337209, overlap 4337209 TGAGCGACAAAAACA CAAAAGGCGGATC CTAA GATCCGCCTTTTG TTATTTATAGCCAGA TERM 5015 4337228 - 4337209 - R 100 -13.6 -5.02287 | opp_overlap 4337204 4337209, overlap 4337204 4337202 GACAAAAACACAAAA GGCGGATC CTAA GATCCGCC TTTTGTTATTTATAG TERM 5016 4337209 - 4337228 + r 100 -13.6 -5.05116 | opp_overlap 4337209 4337204 4337202, overlap 4337204 GACAAAAACACAAAA GGCGGATC CTAA GATCCGCC TTTTGTTATTTATAG Shew185_3651 4337626 - 4337324 - | hypothetical protein TERM 5017 4337376 - 4337398 + g 71 -4.8 -4.5852 | overlap 4337379 4337394 GCATCAGTTGCCGCT TCAGCCGC TAATGCT GCGGCTAA TTTTGCTTTAGCTTG TERM 5018 4338691 - 4338669 - g 85 -6.2 -5.07107 | overlap 4338670 4338685 GAAATGTTTAAAAAA GCTGGCGTGA AGA TGACGCCAGA GCTCAAAGCCGCCAG TERM 5019 4338690 - 4338670 - g 76 -9.7 -3.6318 | overlap 4338669 4338685 AAATGTTTAAAAAAG CTGGCGTGA AGA TGACGCCAG AGCTCAAAGCCGCCA Shew185_3652 4337997 - 4339274 + | glycerophosphoryl diester phosphodiesterase TERM 5020 4339324 - 4339299 - T 100 -14.9 -5.8901 | opp_overlap 4339299 ATAGAAAACAAAAAA TGCGTTAACGA TTAA TCGTTAACGCA TTTTTTTATTGCGAA TERM 5021 4339299 - 4339324 + T 100 -14.9 -5.7946 | opp_overlap 4339299 ATAGAAAACAAAAAA TGCGTTAACGA TTAA TCGTTAACGCA TTTTTTTATTGCGAA Shew185_3653 4340167 - 4339601 - | hypoxanthine-guanine phosphoribosyltransferase TERM 5022 4340433 - 4340416 - R 100 -12.7 -5.30199 | overlap 4340377 AAAAAGCAACAAAAA GGCCACC CTAA GGTGGCC TAAAAACAGCGAATA Shew185_3654 4342225 - 4340459 - | alkaline phosphatase Shew185_3655 4342481 - 4342906 + | CBS domain-containing protein TERM 5023 4342944 - 4342923 - T 83 -5.1 -5.33405 | CTTATCAAACAAAAA GCGCAGC CTCTGTTT GCTACGC TTCCCATTCATCTCA Shew185_3656 4344327 - 4342966 - | MATE efflux family protein Shew185_3657 4344876 - 4345793 + | alpha/beta hydrolase domain-containing protein TERM 5024 4345828 - 4345851 + T 100 -12.6 -4.60924 | opp_overlap 4345828 TTCCTTCATAAAAAA GGCTTTCTAT CTAG ATAGAAAGCC TTTTTAAACCGTTTG TERM 5025 4345851 - 4345828 - T 100 -12.6 -5.24129 | opp_overlap 4345828 TTCCTTCATAAAAAA GGCTTTCTAT CTAG ATAGAAAGCC TTTTTAAACCGTTTG Shew185_3658 4346656 - 4345877 - | prolipoprotein diacylglyceryl transferase TERM 5026 4346266 - 4346255 - G 89 -5.8 -5.29782 | overlap 4346265 CATACGCACAAAAAA GCCA AAAA TGGC GGTGGCGATCGCGAG TERM 5027 4346831 - 4346813 - R 77 -11 -2.87996 | overlap 4346810 TGAAAGGTATAATTA CGGTCAGC TCG GCTGACCA CGCCAAACAGACCAC Shew185_3659 4347315 - 4346869 - | hypothetical protein TERM 5028 4347509 - 4347478 - R 100 -13.3 -4.72029 | opp_overlap 4347485, overlap 4347485 CTGAATTTAAGAAAA TAAAAAAGCAAGC GGTTAA GCTTGCTTTTTTA TTGCGCACTATGCCG TERM 5029 4347485 - 4347502 + r 93 -7 -5.4505 | opp_overlap 4347478 4347485 TAAGAAAATAAAAAA GCAAGC GGTTAA GCTTGC TTTTTTATTGCGCAC TERM 5030 4347502 - 4347485 - R 100 -7 -5.92399 | opp_overlap 4347485, overlap 4347478 TAAGAAAATAAAAAA GCAAGC GGTTAA GCTTGC TTTTTTATTGCGCAC Shew185_3660 4351174 - 4347527 - | putative outer membrane adhesin like proteiin TERM 5031 4347597 - 4347607 + g 75 -5.4 -4.6902 | overlap 4347594 GACAAGCTACCACCT GAAG AAC CTTC TTTTTCAGGTTCTAC TERM 5032 4349924 - 4349911 - G 71 -3.1 -4.99861 | gap 1 CAGCAAGCACAAAAA CGACAC CTG GTG-CG CCACTTGCCGCCGAA Shew185_3661 4351767 - 4351171 - | hypothetical protein Shew185_3662 4352756 - 4352286 - | hypothetical protein TERM 5033 4353977 - 4353991 + G 81 -12.8 -2.88544 | opp_overlap 4353964 AAGACACGCTTAAGC GGGCCG ATG CGGCCC TGTATCAGGCTAAGC Shew185_3663 4353136 - 4354044 + | diguanylate cyclase TERM 5034 4354151 - 4354168 + T 95 -11.3 -4.7497 | opp_overlap 4354151 GCAGCCAACAAAAAA GCGAACC CTAA GGTTCGC TTTTTAATGCATAAA TERM 5035 4354168 - 4354151 - T 100 -11.3 -5.4833 | opp_overlap 4354151 GCAGCCAACAAAAAA GCGAACC CTAA GGTTCGC TTTTTAATGCATAAA Shew185_3664 4356393 - 4354204 - | hypothetical protein Shew185_3665 4356910 - 4356653 - | hypothetical protein TERM 5036 4357397 - 4357377 - g 71 -4.6 -4.5493 | overlap 4357387 4357388 ACCCAAATAAAAGAA GCCACCGA AATTG CCGCTGGC ATAGTACAATATCAG Shew185_3666 4357203 - 4358867 + | methyl-accepting chemotaxis sensory transducer TERM 5037 4358958 - 4358938 - f 83 -11.1 -3.75479 | GAAAATGTAAGATAA GGTCTCAGC CTT GCTGAGGCC GATGGCTGTGGATTG Shew185_3667 4359077 - 4359262 + | hypothetical protein Shew185_3668 4359710 - 4359294 - | hypothetical protein Shew185_3669 4360769 - 4359882 - | LysR family transcriptional regulator Shew185_3670 4360869 - 4361495 + | short chain dehydrogenase Shew185_3671 4361646 - 4361891 + | hypothetical protein TERM 5038 4361955 - 4361929 - T 77 -8.6 -3.88015 | opp_overlap 4361929 CATAGAATGAGTAAA GGCTAGCCGTGG GAA CCCTAGCTAGCC TTAAATAGCAAACAC Shew185_3672 4363180 - 4361984 - | tRNA synthetase class II (G H P and S) TERM 5039 4362968 - 4362950 - G 80 -7.5 -4.65895 | CCCGCCACCGAAAAA CATGTTC TCTGC GAACATG TCCATATGCCCAGAC TERM 5040 4363245 - 4363269 + H 100 -12.2 -5.40072 | gap 1, opp_overlap 4363245 CAAGGTATAAAAAAA CCCTCTG-GCG ATTT CGCTCAGAGGG TTTTTTTAAAGACGC TERM 5041 4363269 - 4363245 - H 100 -12.2 -5.66684 | gap 1, opp_overlap 4363245 CAAGGTATAAAAAAA CCCTCTG-GCG ATTT CGCTCAGAGGG TTTTTTTAAAGACGC TERM 5042 4363319 - 4363291 - H 100 -9.6 -5.18561 | gap 1, opp_overlap 4363288 TAAAGACGCAAAAAA CTACC-CCCCGAG AATT CTCGTGGTGGTAG TGGTGGTGTTAATTG Shew185_3673 4363762 - 4364676 + | hypothetical protein Shew185_3674 4364742 - 4368887 + | hypothetical protein TERM 5043 4368913 - 4368932 + T 95 -13.6 -3.61404 | opp_overlap 4368913 GAATGAATGAAAAAA GGCGAACC ATCA GGTTCGCC TTCTATACTTAATCG TERM 5044 4368932 - 4368913 - T 100 -13.6 -5.32565 | opp_overlap 4368913 GAATGAATGAAAAAA GGCGAACC ATCA GGTTCGCC TTCTATACTTAATCG TERM 5045 4369234 - 4369215 - T 95 -9.3 -5.4833 | opp_overlap 4369215 GCAGGCAATAAAAAA GCGAACC GCTAAG GGTTCGC TTTCATCAAACGTTA TERM 5046 4369215 - 4369234 + T 76 -9.3 -3.737 | opp_overlap 4369215 GCAGGCAATAAAAAA GCGAACC GCTAAG GGTTCGC TTTCATCAAACGTTA Shew185_3675 4372164 - 4369276 - | glycine dehydrogenase TERM 5047 4372277 - 4372250 - R 100 -14.2 -4.08064 | opp_overlap 4372258, overlap 4372254 AATCTTGCGCTAAAA CAAACGAAGCCC CTCA GGGCTTCGTTAG CGTCGACGATTAATC TERM 5048 4372273 - 4372254 - R 100 -13.6 -4.64861 | opp_overlap 4372258, overlap 4372250 TTGCGCTAAAACAAA CGAAGCCC CTCA GGGCTTCG TTAGCGTCGACGATT Shew185_3676 4372676 - 4372287 - | glycine cleavage system protein H Shew185_3677 4373796 - 4372702 - | glycine cleavage system aminomethyltransferase T TERM 5049 4372916 - 4372930 + g 75 -5.6 -4.68384 | opp_overlap 4372916, overlap 4372917 AATACTGGCATATCA TGGCGT AAC ACGCCC TTTTCTTCCATCACT Shew185_3678 4375259 - 4374051 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 5050 4374361 - 4374342 - G 90 -9.3 -4.65895 | opp_overlap 4374349 GGCCGCATCTAAAAA GCCAAGG TTCACC CCTTGGC CCGCCAGCGGATGGA TERM 5051 4375189 - 4375172 - G 73 -9.9 -3.31157 | TAACGACGATATTAA GATTGGC CTGC GCCAATC CAATCGCGGTGGCGA Shew185_3679 4376530 - 4375304 - | 2-polyprenyl-6-methoxyphenol 4-hydroxylase TERM 5052 4376592 - 4376581 - R 72 -4.4 -4.80455 | overlap 4376591 CATGTAAACATAAAA GATG TAAA CATC AGTGCTATGCACTCA TERM 5053 4376648 - 4376633 - R 70 -8.2 -3.6682 | opp_overlap 4376633 TGCTATGGATTCAAA GGCAGG TTTG CCCGCC TTTGATATCAAATGA Shew185_3680 4377318 - 4376743 - | yecA family protein TERM 5054 4377782 - 4377772 - g 78 -5.4 -4.90519 | AAAGCAAAAAAATAA GCAT TAC ATGC AACAGATGGACGACA Shew185_3681 4377554 - 4377856 + | hypothetical protein TERM 5055 4378377 - 4378362 - g 70 -7.6 -3.83169 | overlap 4378353 4378367 CAGAAACCGAGCAAA CTCAAG CAAG CTTGAG CGCTAGCCAACGTAT Shew185_3682 4378163 - 4378870 + | 5-formyltetrahydrofolate cyclo-ligase Shew185_3683 4379648 - 4378902 - | short chain dehydrogenase Shew185_3684 4379920 - 4380318 + | putative thiol-disulphide oxidoreductase DCC TERM 5056 4380357 - 4380374 + T 93 -9.1 -5.30155 | opp_overlap 4380357 CCAGGCATAAAAAAA CGGAGCT CAAT GGCTCCG TTTTTTAATTCGTCA TERM 5057 4380374 - 4380357 - T 100 -8.4 -5.64274 | opp_overlap 4380357 CCAGGCATAAAAAAA CGGAGC TCAATG GCTCCG TTTTTTAATTCGTCA Shew185_3685 4381350 - 4380415 - | malate dehydrogenase TERM 5058 4381019 - 4381038 + g 83 -7.2 -4.67011 | gap 1 ATGCCAACCAAAGCC GTAG-GGCA AGT TGCCGCTAC TTTTTCGATCAGGTT Shew185_3686 4381645 - 4382115 + | arginine repressor TERM 5059 4382140 - 4382121 - T 100 -12.2 -5.88565 | opp_overlap 4382121 CGCAGAATAAAAAAA CAGGTCAG CTTG CTGACCTG TTCTATTTCATCTGT TERM 5060 4382121 - 4382140 + T 91 -12.2 -3.89041 | opp_overlap 4382121 CGCAGAATAAAAAAA CAGGTCAG CTTG CTGACCTG TTCTATTTCATCTGT Shew185_3687 4382888 - 4382256 - | NAD-dependent epimerase/dehydratase TERM 5061 4383066 - 4383039 - g 91 -13.6 -3.60792 | gap 1, opp_overlap 4383005 4383038 4383040, overlap 4383006 4383058 CGTCGAAGTGGCAAA CTGCGGCAGCTTT ACC AAAGCTGCCG-AG CATTTAGACCTCAGC Shew185_3688 4382995 - 4383897 + | LysR family transcriptional regulator TERM 5062 4383907 - 4383932 + T 91 -11.9 -3.97042 | opp_overlap 4383907 CATTAGCATAAAAAA CGCACTTAGGC GTTA GCGTAAGTGCG TTTAATTGATGCTGA TERM 5063 4383932 - 4383907 - T 100 -11.9 -5.32882 | opp_overlap 4383907 CATTAGCATAAAAAA CGCACTTAGGC GTTA GCGTAAGTGCG TTTAATTGATGCTGA Shew185_3689 4384904 - 4383969 - | Dyp-type peroxidase family protein TERM 5064 4385083 - 4385057 - R 100 -13.9 -4.81249 | opp_overlap 4385054 4385053 4385057 CCCTAAATGTAAAAA TTGACGAGACT ATAAA AGTCTCGTCAA TCAGTTTAATCGAAT TERM 5065 4385057 - 4385083 + r 91 -13.9 -2.67981 | opp_overlap 4385057, overlap 4385054 4385053 CCCTAAATGTAAAAA TTGACGAGACT ATAAA AGTCTCGTCAA TCAGTTTAATCGAAT TERM 5066 4385125 - 4385102 - R 77 -8.2 -4.2528 | GTTTAATCGAATAAA TGAAGCAAAG CTTA CTCTGCCTCA AGCTTACCTTAGCGT Shew185_3690 4386863 - 4385151 - | gamma-glutamyltransferase Shew185_3691 4388090 - 4387041 - | ABC transporter related TERM 5067 4387197 - 4387183 - G 74 -4.2 -4.99861 | CAGTAATGACAAAAA GCGCCT AAG AAACGC CGCTCTGTGATCGTG TERM 5068 4387615 - 4387603 - G 73 -3.3 -4.95155 | overlap 4387604 TCGATATTAGAAAAA GGCTC ATC GAGCA GTAATAACTGCGGCT Shew185_3692 4389721 - 4388090 - | binding-protein-dependent transport systems inner membrane component TERM 5069 4389246 - 4389236 - G 73 -8.2 -3.86346 | GGATTGCTCCATAAA CGCG GTA CGCG CCAAGAGATAAATAT TERM 5070 4389766 - 4389737 - R 91 -9.4 -4.62471 | gap 1, opp_overlap 4389736, overlap 4389741 GTCAATCCTTAAAAA GTCA-CAGCGCCA ATCAA TGGCGCTGATAAC CTAATCTGCAATTTT TERM 5071 4389761 - 4389741 - R 83 -12.6 -2.84171 | opp_overlap 4389736, overlap 4389737 ATCCTTAAAAAGTCA CAGCGCCA ATCAA TGGCGCTG ATAACCTAATCTGCA Shew185_3693 4390812 - 4389805 - | extracellular solute-binding protein TERM 5072 4390629 - 4390639 + g 71 -8.2 -3.63744 | opp_overlap 4390607 CACGGGCGAGACGCT CGGC AAT GCCG TCTTTTGCAAAGACC Shew185_3694 4391032 - 4391442 + | hypothetical protein TERM 5073 4391447 - 4391423 - T 70 -8.5 -3.32561 | opp_overlap 4391423, overlap 4391419 4391418 ATAGACCAAAGGGAA GACGCGCAACC GAC GGCTGAGCATC TTCATCCAATTACTG Shew185_3695 4392053 - 4391457 - | glutathione S-transferase domain-containing protein TERM 5074 4392123 - 4392097 - R 82 -11.6 -3.18681 | CGCTAAGGCTATTAA GGGGTGAGAACA GTT TGCTCTCACCGC CGATATAAAATTAGA Shew185_3696 4392888 - 4392139 - | oxidoreductase FAD/NAD(P)-binding subunit TERM 5075 4392975 - 4392947 - R 80 -11.1 -3.28712 | opp_overlap 4392952 4392953, overlap 4392953 CTTTTTTCCGCATAA CAAAAACCCCTTA TGA TAAGGGGCTTATG ACGATAGAACCGAAA TERM 5076 4392969 - 4392953 - R 100 -10.9 -5.18726 | opp_overlap 4392952 4392953, overlap 4392947 TCCGCATAACAAAAA CCCCTTA TGA TAAGGGG CTTATGACGATAGAA TERM 5077 4392953 - 4392969 + r 76 -10.9 -2.58544 | opp_overlap 4392953 4392947, overlap 4392952 TCCGCATAACAAAAA CCCCTTA TGA TAAGGGG CTTATGACGATAGAA Shew185_3697 4393628 - 4393002 - | hypothetical protein TERM 5078 4393267 - 4393257 - G 82 -5.4 -5.09426 | GTGAATGCTAAAAAA TTGC GTC GCAA AACTCACGATACGAT TERM 5079 4393397 - 4393377 - G 73 -10.5 -3.12895 | overlap 4393375 4393373 CTCTTTATTAATAGA CTCTATCGC AGC GCGATAAAG CAAGGTCATAGACTG Shew185_3698 4393854 - 4394471 + | phosphoglycerate mutase Shew185_3699 4394483 - 4395973 + | ferredoxin-dependent glutamate synthase Shew185_3700 4396125 - 4396334 + | hypothetical protein Shew185_3701 4396752 - 4396492 - | hypothetical protein TERM 5080 4396673 - 4396704 + g 100 -8.9 -5.38549 | gap 2 CCACGTTTTTTCAAT GTCGCCA-TGA-TGG CATC CCAATCAGTGGCGAC TTTTTCTTCTTTGCC Shew185_3702 4398629 - 4396833 - | ABC transporter related TERM 5081 4397779 - 4397752 - G 75 -5.6 -4.73864 | gap 1 TTAATCAACACAAAA TCACCTAAGGTCA TAT CG-CCATAGGTGA CTCGGTAAGCCGCCA Shew185_3703 4399041 - 4399289 + | hypothetical protein TERM 5082 4399325 - 4399291 - T 90 -12.3 -3.45532 | opp_overlap 4399296 4399300, overlap 4399296 4399300 TAAGCAATAAATAGA TAAAACAAAGGCGCC GGGAT AGCGCCTTTGTTTTT ACTTTACCCGCAATC TERM 5083 4399296 - 4399320 + T 95 -11.5 -4.98531 | opp_overlap 4399291 4399296 4399300, overlap 4399300 AATAAATAGATAAAA CAAAGGCGC CGGGATA GCGCCTTTG TTTTTACTTTACCCG TERM 5084 4399320 - 4399296 - T 100 -12.2 -4.77778 | opp_overlap 4399296 4399300, overlap 4399291 4399300 AATAAATAGATAAAA CAAAGGCGCC GGGAT AGCGCCTTTG TTTTTACTTTACCCG TERM 5085 4399300 - 4399316 + T 82 -6.5 -5.00388 | opp_overlap 4399296 4399291 4399300, overlap 4399296 AATAGATAAAACAAA GGCGC CGGGATA GCGCC TTTGTTTTTACTTTA TERM 5086 4399316 - 4399300 - T 85 -7.2 -4.87008 | opp_overlap 4399300 4399296, overlap 4399296 4399291 AATAGATAAAACAAA GGCGCC GGGAT AGCGCC TTTGTTTTTACTTTA Shew185_3704 4400448 - 4399393 - | phospho-2-dehydro-3-deoxyheptonate aldolase Shew185_3705 4402018 - 4400825 - | TPR repeat-containing protein TERM 5087 4400880 - 4400899 + g 71 -4.2 -4.74706 | gap 1, opp_overlap 4400880, overlap 4400881 TGACGCTCTGAATCA TCGC-GGCT CAA AGCCAGCGC TTTTTCCATATTCAG Shew185_3706 4402483 - 4402145 - | hypothetical protein TERM 5088 4402619 - 4402636 + r 90 -11.3 -3.84825 | opp_overlap 4402619 TGATCCATAAAAAAA GCAGAGC CTAA GCTCTGC TTTACTATCCCTCGA TERM 5089 4402636 - 4402619 - R 100 -11.3 -5.64274 | opp_overlap 4402619 TGATCCATAAAAAAA GCAGAGC CTAA GCTCTGC TTTACTATCCCTCGA Shew185_3707 4403948 - 4402698 - | ammonium transporter Shew185_3708 4404297 - 4403959 - | nitrogen regulatory protein P-II TERM 5090 4404459 - 4404449 - H 71 -6.8 -4.11585 | opp_overlap 4404447 4404449 ATCGAGCACAAACAA GTGC AAC GCAC TCTTTTAGTGAGCAG Shew185_3709 4404641 - 4405183 + | isochorismatase hydrolase TERM 5091 4405237 - 4405210 - T 93 -11.5 -4.19746 | opp_overlap 4405210 4405214, overlap 4405214 TTTAGGGTAAAATAA TAAAGGTCACA TTAACT TGTGACCTTTA TATTAAAATATCGTT TERM 5092 4405210 - 4405237 + T 81 -11.5 -3.08706 | opp_overlap 4405210 4405214, overlap 4405214 TTTAGGGTAAAATAA TAAAGGTCACA TTAACT TGTGACCTTTA TATTAAAATATCGTT TERM 5093 4405214 - 4405233 + T 77 -7.9 -4.20769 | opp_overlap 4405214 4405210, overlap 4405210 GGGTAAAATAATAAA GGTCACA TTAACT TGTGACC TTTATATTAAAATAT TERM 5094 4405233 - 4405214 - T 84 -7.9 -4.67697 | opp_overlap 4405210 4405214, overlap 4405210 GGGTAAAATAATAAA GGTCACA TTAACT TGTGACC TTTATATTAAAATAT TERM 5095 4405615 - 4405605 - T 71 -6.8 -4.04206 | CCATCGTTATAGAAA GCAG ATA CTGC AGAGCTATCGTTGAA TERM 5096 4406214 - 4406236 + T 71 -6.3 -4.21471 | opp_overlap 4406217, overlap 4406217 ATAAAGGATATAAAA AAAGCTCCT TATAT AGGAGCTTC TTATTATTTTGAAGT TERM 5097 4406217 - 4406233 + T 77 -8 -4.20953 | opp_overlap 4406217, overlap 4406214 AAGGATATAAAAAAA GCTCCT TATAT AGGAGC TTCTTATTATTTTGA TERM 5098 4406233 - 4406217 - T 100 -8 -5.75478 | opp_overlap 4406217 4406214 AAGGATATAAAAAAA GCTCCT TATAT AGGAGC TTCTTATTATTTTGA Shew185_3711 4407666 - 4406263 - | cytochrome c nitrite reductase TERM 5099 4406804 - 4406832 + g 71 -6.8 -4.16943 | gap 1 CCCACTTTATGATCT GTGTACTTACGAC CCTT GTCGTTAGT-CAC TTTTGGCATGTGACA TERM 5100 4407232 - 4407249 + g 76 -9.1 -3.85165 | AGTATTGACGACTTC TGGGCCG CCCT TGGCCCA TTTACCTTTAAAGTA TERM 5101 4407828 - 4407842 + H 73 -5.8 -4.50976 | opp_overlap 4407835 CTTCTACTCTTTTGT TAATGT ATT ACATTA TTTTCTAATGTAAAA TERM 5102 4408441 - 4408429 - g 71 -4.8 -4.48713 | TTTACTAAGAAGAAA GTGG TAATC CCAC TGCAAAAGCTTATGG Shew185_3712 4407892 - 4409724 + | nitrate/nitrite sensor protein NarQ Shew185_3713 4409717 - 4410346 + | two component LuxR family transcriptional regulator TERM 5103 4410377 - 4410406 + T 93 -10.9 -4.72986 | opp_overlap 4410379 4410383, overlap 4410379 AGGTATCGCGCAAAC AATAAAGGCAATC CCAT GATTGCCTTTATG TTTTTAATCGAACTG TERM 5104 4410379 - 4410404 + T 100 -13.5 -3.98256 | opp_overlap 4410379 4410383, overlap 4410377 GTATCGCGCAAACAA TAAAGGCAATC CCAT GATTGCCTTTA TGTTTTTAATCGAAC TERM 5105 4410404 - 4410379 - T 100 -13.5 -3.91716 | opp_overlap 4410379 4410377, overlap 4410383 GTATCGCGCAAACAA TAAAGGCAATC CCAT GATTGCCTTTA TGTTTTTAATCGAAC TERM 5106 4410400 - 4410383 - T 91 -9.9 -4.56978 | opp_overlap 4410379 4410377, overlap 4410379 CGCGCAAACAATAAA GGCAATC CCAT GATTGCC TTTATGTTTTTAATC Shew185_3714 4411051 - 4410437 - | hypothetical protein TERM 5107 4411273 - 4411245 - g 82 -5.3 -5.08601 | gap 1 CTATCGCAATAAAAA GGCGCGCCACTG GATACT CAATAGCG-GCC TGCCGAAGGTCGAGA Shew185_3715 4411099 - 4412076 + | Mg2 transporter protein CorA family protein TERM 5108 4412119 - 4412092 - T 85 -8.5 -4.42748 | opp_overlap 4412092 4412095, overlap 4412096 CCACCTTAAAAACAA CAAAGCCAATC GATTAG GATTGGCGTTG TTTGCTCTCAGTCCG TERM 5109 4412092 - 4412119 + T 77 -8.5 -3.84825 | opp_overlap 4412092 4412096, overlap 4412095 CCACCTTAAAAACAA CAAAGCCAATC GATTAG GATTGGCGTTG TTTGCTCTCAGTCCG TERM 5110 4412115 - 4412096 - T 84 -7.9 -4.76802 | opp_overlap 4412095 4412092, overlap 4412092 CTTAAAAACAACAAA GCCAATC GATTAG GATTGGC GTTGTTTGCTCTCAG Shew185_3716 4413301 - 4412180 - | succinylglutamate desuccinylase/aspartoacylase TERM 5111 4412355 - 4412387 + g 81 -12.1 -3.05963 | opp_overlap 4412344 4412349 4412348 TTTACTAAGGGCTGT CC-CGCAGCCAGTGG TTCAC CCACTGGC-GCGAGG TATTCCACTAACCCT TERM 5112 4412730 - 4412720 - G 83 -6.8 -4.88067 | AGGGATCGACAAAAA CTGC GCG GCAG CTAAGTCATATTCAG Shew185_3717 4414658 - 4413303 - | aspartate kinase III Shew185_3718 4415519 - 4415085 - | hypothetical protein TERM 5113 4415702 - 4415676 - H 73 -6.8 -4.19817 | CCGACTCACCTAAAA TTTGTTAACA TTTCATT TGTTAACAAA TGACTAAAACGAGTA Shew185_3719 4416108 - 4416824 + | two-component response regulator TERM 5114 4416890 - 4416907 + T 100 -9.9 -5.77988 | opp_overlap 4416890 TCAATTCACAAAAAA CCAGATC CTAG GATCTGG TTTTTTTATGTCTGT TERM 5115 4416907 - 4416890 - T 100 -9.9 -5.31456 | opp_overlap 4416890 TCAATTCACAAAAAA CCAGATC CTAG GATCTGG TTTTTTTATGTCTGT Shew185_3720 4419225 - 4416922 - | peptidase S9B dipeptidylpeptidase IV subunit TERM 5116 4418844 - 4418856 + g 87 -6.9 -5.1356 | CATAAATACGTTGGC GCTCG CGG CGGGC TTTTTCTTCATCGGA Shew185_3721 4419492 - 4420484 + | fructose-1,6-bisphosphatase TERM 5117 4420537 - 4420520 - T 93 -11.3 -4.4648 | opp_overlap 4420520 ATTTTTAGGATAAAA GCCACTG ACCA CAGTGGC TTTTTTGTTATCGCG TERM 5118 4420520 - 4420537 + T 100 -11.3 -5.55769 | opp_overlap 4420520 ATTTTTAGGATAAAA GCCACTG ACCA CAGTGGC TTTTTTGTTATCGCG Shew185_3722 4421349 - 4420747 - | hypothetical protein Shew185_3723 4421814 - 4421356 - | hypothetical protein TERM 5119 4422168 - 4422194 + r 72 -8.7 -3.53012 | overlap 4422172 TTAAAAGGATCGGGC GTGACGCAGAC AGGAC GTCTGCGTAGC TTTCGGAGCACAGGA TERM 5120 4422172 - 4422190 + r 72 -10.3 -2.64155 | overlap 4422168 AAGGATCGGGCGTGA CGCAGAC AGGAC GTCTGCG TAGCTTTCGGAGCAC Shew185_3724 4423011 - 4422442 - | hypothetical protein Shew185_3725 4423408 - 4423902 + | hypothetical protein TERM 5121 4424035 - 4424006 - f 100 -16.7 -3.53012 | opp_overlap 4424012, overlap 4424012 TTCGTTTCTGCTAAA TTAAAAGCCACTC TTTT GAGTGGCTTTTAA TAAAGTCAAACCGTA TERM 5122 4424012 - 4424029 + F 93 -11.3 -4.26903 | opp_overlap 4424006 4424012 TCTGCTAAATTAAAA GCCACTC TTTT GAGTGGC TTTTAATAAAGTCAA TERM 5123 4424029 - 4424012 - f 93 -11.3 -4.54727 | opp_overlap 4424012, overlap 4424006 TCTGCTAAATTAAAA GCCACTC TTTT GAGTGGC TTTTAATAAAGTCAA Shew185_3726 4424353 - 4424823 + | hypothetical protein TERM 5124 4424888 - 4424858 - T 86 -12.1 -3.41309 | gap 1, opp_overlap 4424865, overlap 4424865 ATAGATCAATATGAA CAAAAAAGCCACTG ATGA CAGTGGC-TTTTTG CATTTATAGCATATG TERM 5125 4424882 - 4424865 - T 100 -11.3 -5.54885 | opp_overlap 4424865, overlap 4424858 AATATGAACAAAAAA GCCACTG ATGA CAGTGGC TTTTTGCATTTATAG TERM 5126 4424865 - 4424882 + T 95 -11.3 -4.84529 | opp_overlap 4424865 4424858 AATATGAACAAAAAA GCCACTG ATGA CAGTGGC TTTTTGCATTTATAG Shew185_3727 4426162 - 4424918 - | sodium:dicarboxylate symporter Shew185_3728 4427437 - 4426565 - | hypothetical protein TERM 5127 4427289 - 4427277 - G 78 -7.7 -4.43213 | CTTAACAGATCAAAA TCTCG GGG CGAGA AGCATAGATACTTTT Shew185_3729 4428645 - 4427425 - | hypothetical protein Shew185_3730 4429347 - 4428694 - | hypothetical protein Shew185_3731 4433021 - 4429347 - | hypothetical protein TERM 5128 4430644 - 4430656 + g 81 -7.7 -4.64383 | overlap 4430639 TCACTACGACGCTGC TCAGC GCG GCTGA TTTTGGTTTCTAATT TERM 5129 4430870 - 4430882 + g 74 -9.1 -3.62531 | overlap 4430864 4430877 CTTGTTTTTCCATGC GCGCT TCG AGCGC TTGCTCTTTTTGCTC TERM 5130 4430877 - 4430888 + g 81 -5.8 -4.87626 | overlap 4430870 4430864 TTCCATGCGCGCTTC GAGC GCTT GCTC TTTTTGCTCTTCGAG Shew185_3732 4433998 - 4433378 - | response regulator receiver protein Shew185_3733 4435935 - 4433998 - | integral membrane sensor signal transduction histidine kinase TERM 5131 4434317 - 4434343 + g 74 -2.9 -5.03145 | overlap 4434318 CTGGATTCAAGCTCT AGCCGCTGA ACACAGGCA TCGGCGGCG TTTTTTAGCAGGTTA Shew185_3734 4436330 - 4437112 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shew185_3735 4437102 - 4438184 + | polysulphide reductase NrfD TERM 5132 4440713 - 4440699 - g 73 -7 -4.15044 | overlap 4440700 GCCGTTTTGAAGAAA TGCGCG GCG CGCGCG ATGACGCGGGGAATC TERM 5133 4440712 - 4440700 - g 72 -10.5 -3.08812 | overlap 4440699 CCGTTTTGAAGAAAT GCGCG GCG CGCGC GATGACGCGGGGAAT Shew185_3736 4438220 - 4441327 + | molydopterin dinucleotide-binding region TERM 5134 4441370 - 4441355 - f 80 -10.4 -3.66028 | opp_overlap 4441355, overlap 4441346 GATAACGCTTAAGAA GCTGCC CTTT GGCAGC TTTTTCTATGGCATT TERM 5135 4441355 - 4441370 + F 93 -10.4 -4.98522 | opp_overlap 4441346 4441355 GATAACGCTTAAGAA GCTGCC CTTT GGCAGC TTTTTCTATGGCATT Shew185_3737 4441664 - 4442968 + | methyl-accepting chemotaxis sensory transducer TERM 5136 4442982 - 4443008 + T 71 -5 -4.53303 | opp_overlap 4442996 4442999, overlap 4442984 4442999 AATCCCCTCGCATTT CATCGCGCGATC AAG GATCGCATGGCG TTTTATCTACCGATA TERM 5137 4443039 - 4442996 - T 100 -18.4 -3.14564 | opp_overlap 4442984 4442982 4442999, overlap 4442999 TCATCGCGCGATCAA GGATCGCATGGCGTTTTATC TACC GATAAAACGCCATGCGATTG TTCCGACAATCAATA TERM 5138 4442999 - 4443036 + T 100 -24.5 -3.62046 | opp_overlap 4442996 4442999, overlap 4442984 4442982 TCGCGCGATCAAGGA TCGCATGGCGTTTTATC TACC GATAAAACGCCATGCGA TTGTTCCGACAATCA TERM 5139 4443036 - 4442999 - T 100 -24.5 -2.77899 | opp_overlap 4442984 4442982 4442999, overlap 4442996 TCGCGCGATCAAGGA TCGCATGGCGTTTTATC TACC GATAAAACGCCATGCGA TTGTTCCGACAATCA Shew185_3738 4443750 - 4443049 - | hypothetical protein Shew185_3739 4444192 - 4443962 - | hypothetical protein Shew185_3740 4444746 - 4444351 - | hypothetical protein Shew185_3741 4445115 - 4444837 - | PpiC-type peptidyl-prolyl cis-trans isomerase Shew185_3742 4447639 - 4445264 - | penicillin-binding protein 1B TERM 5140 4446945 - 4446935 - G 73 -8.2 -3.89614 | GCTAATGTTTACAAA CGCG GCG CGCG CAATCGCGAAGGGAT Shew185_3743 4450248 - 4447678 - | ATP-dependent helicase HrpB TERM 5141 4450189 - 4450178 - G 73 -3.6 -4.91109 | overlap 4450179 GCGTGACGAGAAAAA GCCG CACG CAGC GGTGCTAATAAGCTA Shew185_3744 4452550 - 4450331 - | diguanylate cyclase/phosphodiesterase TERM 5142 4453095 - 4453071 - g 100 -15.1 -3.16267 | opp_overlap 4453075, overlap 4453061 4453075 GCTAAGCAGACGCAA GCAATCGCAGG CCG CCTGCAATTGC ATAGCAGTGAACACC Shew185_3745 4452750 - 4453295 + | 2'-5' RNA ligase TERM 5143 4453335 - 4453316 - T 100 -10 -5.93252 | opp_overlap 4453316 GTTAAAAACAAAAAA GCCCGAGT ATTA ACTCAGGC TTTATTTTCAACTTC TERM 5144 4453316 - 4453335 + T 84 -7.8 -4.68655 | opp_overlap 4453316 GTTAAAAACAAAAAA GCCCGAGT ATTA ACTCAGGC TTTATTTTCAACTTC Shew185_3746 4454183 - 4453404 - | Sel1 domain-containing protein TERM 5145 4454124 - 4454112 - G 71 -4.8 -4.52589 | CTGCGGGATAGAAAA TGCG TGCGC CGCA GAGCTAAGCCCTATC Shew185_3747 4454614 - 4455249 + | cAMP-regulatory protein TERM 5146 4455312 - 4455287 - f 80 -10.5 -3.72576 | opp_overlap 4455288, overlap 4455288 GCCTGCCTTATTAAA GTGGCCTAGAA TAAA TTCTAGGCCAT TTTTTATTGGAGAGC TERM 5147 4455311 - 4455288 - f 91 -14 -2.83403 | opp_overlap 4455288, overlap 4455287 CCTGCCTTATTAAAG TGGCCTAGAA TAAA TTCTAGGCCA TTTTTTATTGGAGAG TERM 5148 4455288 - 4455311 + F 100 -14 -5.4505 | opp_overlap 4455288 4455287 CCTGCCTTATTAAAG TGGCCTAGAA TAAA TTCTAGGCCA TTTTTTATTGGAGAG Shew185_3748 4455332 - 4455679 + | hypothetical protein Shew185_3749 4455660 - 4456334 + | two component transcriptional regulator Shew185_3750 4456331 - 4457659 + | integral membrane sensor signal transduction histidine kinase TERM 5149 4457732 - 4457714 - T 100 -13.2 -5.65177 | opp_overlap 4457714 ATACTCATAAAAAAA CGCCATCA AAT TGATGGCG TTTTTTATGCTTAAT TERM 5150 4457714 - 4457732 + T 100 -13.2 -5.38249 | opp_overlap 4457714 ATACTCATAAAAAAA CGCCATCA AAT TGATGGCG TTTTTTATGCTTAAT TERM 5151 4457741 - 4457764 + T 77 -8.2 -4.21319 | GATGGCGTTTTTTAT GCTTAATGTC TGAT GACGTTAGGC TTTATTCACGTTCGT Shew185_3751 4458562 - 4457759 - | hypothetical protein TERM 5152 4457816 - 4457791 - G 81 -7.7 -4.59773 | gap 1, overlap 4457793 TCGTACTTTCAAAAA TCTTGTCGGCAG ACG CTGCC-ACAAAA CCAGTATACAGCTCA TERM 5153 4458721 - 4458702 - R 88 -8.6 -4.72272 | opp_overlap 4458702 4458702 GCTTGTTATTAAAAA GGAAGAAC ATTC GTCCTTCC TCCTCTTTACCACGT Shew185_3752 4460232 - 4458772 - | succinylglutamic semialdehyde dehydrogenase TERM 5154 4459843 - 4459815 - G 73 -10.4 -3.12595 | gap 1, opp_overlap 4459816, overlap 4459813 TGTAAGGACCGAACA CCGCCACAACACC GTGG GGT-TTGTGACGG ATAACCGCGCGTCCC Shew185_3753 4461261 - 4460242 - | arginine N-succinyltransferase TERM 5155 4461379 - 4461355 - R 100 -9.4 -5.24129 | gap 1, opp_overlap 4461355 TTCCCTGACAAAAAA GGAGTGC-GAA TAAA TTCAGCACTCC TTTGGTCATTTAGGC TERM 5156 4461355 - 4461379 + r 83 -9.4 -3.8901 | gap 1, opp_overlap 4461355 TTCCCTGACAAAAAA GGAGTGC-GAA TAAA TTCAGCACTCC TTTGGTCATTTAGGC Shew185_3754 4462606 - 4461389 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein Shew185_3755 4463826 - 4462915 - | alpha/beta hydrolase domain-containing protein TERM 5157 4463587 - 4463573 - G 79 -2 -5.45802 | overlap 4463574 4463575 GTTTTAAAACAAAAA CCTCCG CCA CGGATA TAAAACAGATTGCCA Shew185_3756 4465027 - 4463882 - | putative signal transduction protein TERM 5158 4465194 - 4465210 + r 77 -9.4 -3.53811 | opp_overlap 4465194 GTTGGCCAATAAAAA GGCCTC ACGTA GAGGCC TTTACAGGAAATAGA TERM 5159 4465210 - 4465194 - R 93 -9.4 -5.06414 | opp_overlap 4465194 GTTGGCCAATAAAAA GGCCTC ACGTA GAGGCC TTTACAGGAAATAGA Shew185_3757 4467712 - 4465232 - | peptidase S9 prolyl oligopeptidase TERM 5160 4466982 - 4466997 + g 80 -4.6 -5.10029 | TACCAAGTGCTGGCG GCGAGC GTCG GGTCGC TTTTTTGCAATTCAT Shew185_3758 4468488 - 4467904 - | glutamine amidotransferase of anthranilate synthase TERM 5161 4468615 - 4468632 + r 88 -11.3 -3.66908 | opp_overlap 4468615, overlap 4468611 TACAGCGACAAAAAA GCCAGTC ATAG GACTGGC TTAGTTTTAAAACAA TERM 5162 4468632 - 4468615 - R 100 -11.3 -5.29782 | opp_overlap 4468615 4468611 TACAGCGACAAAAAA GCCAGTC ATAG GACTGGC TTAGTTTTAAAACAA Shew185_3759 4469118 - 4468681 - | ClpXP protease specificity-enhancing factor Shew185_3760 4469747 - 4469118 - | stringent starvation protein A TERM 5163 4469807 - 4469779 - R 100 -19.7 -5.34857 | opp_overlap 4469784 4469800 CGAAATAAAACAAAA GTAAACGAGGGGC TAA GCCCCCCGTTTAC ACTATGCGGATATTA TERM 5164 4469784 - 4469802 + r 88 -11.6 -3.63627 | opp_overlap 4469779, overlap 4469800 TAAAACAAAAGTAAA CGAGGGGC TAA GCCCCCCG TTTACACTATGCGGA Shew185_3761 4470542 - 4469844 - | cytochrome c1 Shew185_3762 4471756 - 4470542 - | cytochrome b/b6 domain-containing protein Shew185_3763 4472346 - 4471756 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 5165 4472535 - 4472523 - R 79 -3.4 -5.40072 | TGTTTTTTAAAAAAA GTCT AAAAA AGAC CCAACTATTAACCCA TERM 5166 4472696 - 4472674 - R 100 -13.5 -5.74122 | opp_overlap 4472674 4472676 CATTAGATAAAAAAA TAGGCCCTG GGTAA CAGGGCCTA TTAGATCAATACTTT TERM 5167 4472674 - 4472696 + r 93 -13.5 -3.09208 | opp_overlap 4472674, overlap 4472676 CATTAGATAAAAAAA TAGGCCCTG GGTAA CAGGGCCTA TTAGATCAATACTTT TERM 5168 4472676 - 4472694 + r 83 -11.7 -3.10056 | opp_overlap 4472674, overlap 4472674 TTAGATAAAAAAATA GGCCCTG GGTAA CAGGGCC TATTAGATCAATACT Shew185_3764 4473612 - 4472719 - | HflC protein TERM 5169 4473136 - 4473157 + g 73 -7.3 -4.20696 | overlap 4473129 GTCTTTGGCGCTTTC TGAGGCGTT TTCT AACGCGTCA TTTTGCAATTCATCA TERM 5170 4473337 - 4473348 + g 72 -5.8 -4.39329 | opp_overlap 4473336 CTTCACATAGGAATC GACC ATAA GGTC TTTCTTCTCTGAAGT Shew185_3765 4474755 - 4473616 - | HflK protein Shew185_3766 4476099 - 4474792 - | GTP-binding protein HSR1-related TERM 5171 4475553 - 4475581 + g 73 -4.5 -4.75372 | overlap 4475561 TCTGTTCACGTTGTT TATCAACTCGCTC TAA GCGCTTGTTGATA TTTTTAATCCGTCCT Shew185_3767 4476395 - 4476123 - | RNA chaperone Hfq Shew185_3768 4477414 - 4476488 - | tRNA delta(2)-isopentenylpyrophosphate transferase Shew185_3769 4479299 - 4477407 - | DNA mismatch repair protein MutL Shew185_3770 4480731 - 4479310 - | N-acetylmuramoyl-L-alanine amidase TERM 5172 4479729 - 4479699 - G 81 -12.6 -2.59133 | opp_overlap 4479723 4479728, overlap 4479698 4479696 4479722 4479723 AGATAGAAGGAATAT CCGGCGATTTCAGC ACA GCTAAACTCGCCGA CTCGGGGCGACTCTT Shew185_3771 4481198 - 4480740 - | hypothetical protein Shew185_3772 4482785 - 4481301 - | carbohydrate kinase, YjeF related protein TERM 5173 4481862 - 4481840 - G 71 -9.1 -3.47941 | overlap 4481841 GACCAAGTACGATAA CCTGCGCCC AACCA AGGCGCAGA TACACTTCCATATCG TERM 5174 4483034 - 4483008 - R 83 -10.9 -3.65001 | opp_overlap 4483013, overlap 4483013 TAGATGACACAAAGA CAAAAGCCAGC ACTAG GCTGGCTTTGG GAATTGAGAAGCGAT TERM 5175 4483013 - 4483029 + r 77 -9.4 -3.60792 | opp_overlap 4483008 4483013 GACACAAAGACAAAA GCCAGC ACTAG GCTGGC TTTGGGAATTGAGAA TERM 5176 4483029 - 4483013 - R 93 -9.4 -4.87328 | opp_overlap 4483013, overlap 4483008 GACACAAAGACAAAA GCCAGC ACTAG GCTGGC TTTGGGAATTGAGAA Shew185_3773 4483511 - 4483056 - | hypothetical protein Shew185_3774 4485152 - 4484607 - | oligoribonuclease TERM 5177 4485177 - 4485190 + H 82 -3.8 -5.4505 | TTATCATGTCAGTTA GCCT AAATTC AGGC TTTTTTATTCAAGAG Shew185_3775 4485265 - 4486329 + | ribosome-associated GTPase Shew185_3776 4486392 - 4487270 + | phosphatidylserine decarboxylase TERM 5178 4487319 - 4487344 + G 100 -13.3 -4.79683 | ATTGAATTACATTTA GCTGTGCTGCT ATTT GGCGGCACAGC TTTGTTTTCTAAATT Shew185_3777 4487277 - 4488158 + | hypothetical protein TERM 5179 4490116 - 4490104 - g 73 -5.5 -4.59773 | TCTTAGCCGTAAAAA CTCGG ATG CCAAG AAAGACGGTAAAAAC Shew185_3778 4488212 - 4491430 + | MscS mechanosensitive ion channel TERM 5180 4491514 - 4491494 - g 81 -11.2 -3.6581 | overlap 4491492 ATCAGGCCGAAAATA CCTTAGCC GCCAT GGCTAAGG CGTTAGAATTAGGGG Shew185_3779 4491445 - 4492167 + | glycerophosphoryl diester phosphodiesterase Shew185_3780 4492520 - 4492188 - | hypothetical protein TERM 5181 4492267 - 4492254 - G 71 -6.7 -4.29327 | opp_overlap 4492265, overlap 4492261 CACAATTAACAGAAA CATCC AATG GGATG GCATAGCCACTATGT TERM 5182 4493510 - 4493490 - g 70 -9.7 -3.11208 | overlap 4493466 4493504 TTTTAGCCAAAACTA TCGCCGCTA CAT TAGCGGTGA GCCACTGCAGAATCG Shew185_3781 4492615 - 4493550 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 5183 4493617 - 4493587 - T 77 -4.8 -4.96762 | opp_overlap 4493592, overlap 4493592 CAGAGAGCAGAAAAA GCAAAGGCAATAGT CAG ACTATTACCTTTTT ATCTTAAGTTTTAGG TERM 5184 4493592 - 4493612 + T 85 -6.9 -5.1167 | opp_overlap 4493587 4493592 AGCAGAAAAAGCAAA GGCAATAGT CAG ACTATTACC TTTTTATCTTAAGTT TERM 5185 4493612 - 4493592 - T 86 -9.1 -4.3902 | opp_overlap 4493592, overlap 4493587 AGCAGAAAAAGCAAA GGCAATAGT CAG ACTATTACC TTTTTATCTTAAGTT Shew185_3782 4495210 - 4493636 - | methyl-accepting chemotaxis sensory transducer TERM 5186 4495325 - 4495315 - H 71 -6.8 -4.1196 | opp_overlap 4495315 AACCTACTTCTAAAA CTGC CTA GCAG TGTAATGCTAAAACA Shew185_3783 4495472 - 4495663 + | BFD/(2Fe-2S)-binding domain-containing protein Shew185_3784 4496647 - 4495991 - | thiopurine S-methyltransferase TERM 5187 4496302 - 4496292 - G 70 -2.4 -4.91109 | opp_overlap 4496292 4496293 4496296, overlap 4496293 GCGCGATCATAAAAA GCCG TCA CCGC TTGGGTGATAGTCTT Shew185_3785 4497091 - 4496750 - | hypothetical protein TERM 5188 4496883 - 4496893 + g 73 -3.2 -4.8622 | AACTGCTGTTTTAAC TCGG CAA TCGA TTTTTCGTTCACGGC Shew185_3786 4497340 - 4499148 + | protein kinase TERM 5189 4499136 - 4499159 + T 79 -11 -3.1886 | opp_overlap 4499138, overlap 4499138 GAAAAATCCAAAAGA AATAGGCGCC TAAT GGCGCCTATA TTCATCAGATTAAAT TERM 5190 4499138 - 4499157 + T 93 -13.6 -3.15574 | opp_overlap 4499138, overlap 4499136 AAAATCCAAAAGAAA TAGGCGCC TAAT GGCGCCTA TATTCATCAGATTAA TERM 5191 4499157 - 4499138 - T 100 -13.6 -4.75954 | opp_overlap 4499138 4499136 AAAATCCAAAAGAAA TAGGCGCC TAAT GGCGCCTA TATTCATCAGATTAA Shew185_3787 4501577 - 4499169 - | hypothetical protein TERM 5192 4499352 - 4499368 + g 88 -12.3 -3.62591 | opp_overlap 4499329 4499328 ATCGTTGATCGCAGC CCTCACC TCT GGTGAGG TTTGAGGATTGTGCA TERM 5193 4501705 - 4501683 - R 71 -6.3 -4.15998 | gap 1, overlap 4501684 ATTTAAAGTAAATAA TGCGAGGCCA TCAC TGGCCCCG-A GCAAATAAATTAACG Shew185_3788 4505431 - 4501715 - | multi-sensor hybrid histidine kinase TERM 5194 4503132 - 4503145 + g 73 -5.2 -4.60487 | CTCAGCAGCGATTGC GCCG AGAAAC CGGC TTTTTCGAGGTAATC TERM 5195 4505618 - 4505592 - R 86 -10.2 -4.10161 | opp_overlap 4505596, overlap 4505593 4505596 TACTACTCCCTAAAA GTAAGGCCTCAA TAT CTGAGGCCTTAG TGATTACTCTAAAAT TERM 5196 4505617 - 4505593 - R 93 -13.7 -3.05775 | opp_overlap 4505596, overlap 4505592 4505596 ACTACTCCCTAAAAG TAAGGCCTCAA TAT CTGAGGCCTTA GTGATTACTCTAAAA TERM 5197 4505596 - 4505614 + r 77 -10.3 -3.2981 | opp_overlap 4505593 4505592 4505596 ACTCCCTAAAAGTAA GGCCTCA ATATC TGAGGCC TTAGTGATTACTCTA TERM 5198 4505614 - 4505596 - R 83 -11 -3.67175 | opp_overlap 4505596, overlap 4505593 4505592 ACTCCCTAAAAGTAA GGCCTCAA TAT CTGAGGCC TTAGTGATTACTCTA Shew185_3789 4507041 - 4505647 - | PhoH family protein TERM 5199 4506286 - 4506298 + g 73 -4.7 -4.67353 | TTTAGGTTTAACACC CCACG CTT CGAGG TTTTTCACTCGCTCA TERM 5200 4509037 - 4509010 - g 73 -9.8 -3.32844 | overlap 4509013 GCCCTGAGCTTAGAA GAAGCCCTGCGC ACCC GCGAAGGGATTC AAGCAACGGTATTCC Shew185_3790 4507447 - 4510353 + | ATP-dependent helicase HepA TERM 5201 4510386 - 4510405 + F 100 -10.7 -5.26918 | opp_overlap 4510383 4510386 4510398, overlap 4510400 GGTTTCCATCAATTA GCCCAGC CAAAGC GCTGGGC TTTTTTATGCCCTGT TERM 5202 4510405 - 4510386 - f 77 -10.7 -2.77899 | opp_overlap 4510386 4510400, overlap 4510383 4510398 GGTTTCCATCAATTA GCCCAGC CAAAGC GCTGGGC TTTTTTATGCCCTGT Shew185_3791 4510611 - 4511513 + | hypothetical protein Shew185_3792 4512355 - 4511549 - | enoyl-CoA hydratase Shew185_3793 4512898 - 4513893 + | response regulator receiver protein Shew185_3794 4513912 - 4514898 + | diguanylate cyclase TERM 5203 4514936 - 4514918 - T 100 -13.2 -5.10461 | opp_overlap 4514918 TCTACCTAATAAAAA TGCCCATC TAT GATGGGCA TTTTTATTTAAAGCG TERM 5204 4514918 - 4514936 + T 100 -13.2 -5.27335 | opp_overlap 4514918 TCTACCTAATAAAAA TGCCCATC TAT GATGGGCA TTTTTATTTAAAGCG Shew185_3795 4515389 - 4514979 - | hypothetical protein Shew185_3796 4516173 - 4515430 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 5205 4515789 - 4515817 + g 71 -4.5 -4.62783 | opp_overlap 4515800, overlap 4515790 TTTTTTCCACGGTTT TCGCCATAGTATC AAA GGCACTATGACGG TTTTTACGGTCGATC TERM 5206 4516279 - 4516316 + r 100 -19.4 -4.56961 | opp_overlap 4516279 CAAGCAAGCAAAAAA GCCCATCGATATACTG AAAATC CAGTGTATCGATGGGC TTTTATATCAATATT TERM 5207 4516316 - 4516279 - R 100 -17.9 -5.32565 | opp_overlap 4516279 CAAGCAAGCAAAAAA GCCCATCGATATACTGA AAAT CCAGTGTATCGATGGGC TTTTATATCAATATT Shew185_3797 4517135 - 4516335 - | ABC-3 protein Shew185_3798 4518048 - 4517140 - | periplasmic solute binding protein TERM 5208 4517440 - 4517454 + g 76 -2.1 -5.1925 | GTATCTGAAGCTTGA GTGGT AAGCG ATCAC TTTTTTACCTTGTAA Shew185_3799 4519216 - 4518032 - | hypothetical protein Shew185_3800 4519589 - 4519299 - | hypothetical protein TERM 5209 4519385 - 4519371 - G 71 -5 -4.64861 | GGGGGGTAAAATAAA TTCGAC CAC ATCGAA ATGCTGTACGCCTAA Shew185_3801 4519844 - 4520005 + | hypothetical protein Shew185_3802 4520455 - 4520126 - | hypothetical protein TERM 5210 4520324 - 4520309 - G 74 -4 -4.92385 | CACACTCAAATAAAA GCCTAA TAAC TTAAGC TTAGCCAATGTTGGG Shew185_3803 4520701 - 4522350 + | MscS mechanosensitive ion channel TERM 5211 4522460 - 4522417 - T 100 -19.1 -3.62572 | gap 1, opp_overlap 4522409 4522428, overlap 4522418 4522420 4522428 TATTAGCACGTTAAA CCAGAGTCAAAGGGCGTAGC AGCAA GCT-CGCCCTTTGACTCTGC AACGCTTTTGCATCT TERM 5212 4522459 - 4522418 - T 100 -22.6 -2.77222 | gap 1, opp_overlap 4522409 4522428, overlap 4522417 4522420 4522428 ATTAGCACGTTAAAC CAGAGTCAAAGGGCGTAGC AGCAA GCT-CGCCCTTTGACTCTG CAACGCTTTTGCATC TERM 5213 4522457 - 4522420 - T 100 -19.4 -2.93089 | gap 1, opp_overlap 4522409 4522428, overlap 4522418 4522417 4522428 TAGCACGTTAAACCA GAGTCAAAGGGCGTAGC AGCAA GCT-CGCCCTTTGACTC TGCAACGCTTTTGCA TERM 5214 4522449 - 4522428 - T 70 -8 -3.75229 | gap 1, opp_overlap 4522409 4522428, overlap 4522420 4522418 4522417 TAAACCAGAGTCAAA GGGCGTAGC AGCAA GCT-CGCCC TTTGACTCTGCAACG TERM 5215 4522428 - 4522449 + T 70 -8 -3.70902 | gap 1, opp_overlap 4522428 4522420 4522418 4522417, overlap 4522409 TAAACCAGAGTCAAA GGGCGTAGC AGCAA GCT-CGCCC TTTGACTCTGCAACG Shew185_3804 4524275 - 4522518 - | formate--tetrahydrofolate ligase TERM 5216 4523855 - 4523834 - G 83 -12.9 -3.01712 | opp_overlap 4523831, overlap 4523818 GCGCCTCGTGGAATA GCCGCGCCG CAAT CGCCGCGGC CCCTAAATTGTGGGC Shew185_3805 4524480 - 4525370 + | aldo/keto reductase TERM 5217 4525397 - 4525434 + T 100 -19.3 -3.41988 | opp_overlap 4525401 4525404 4525407, overlap 4525399 4525401 4525404 4525407 CAAACGTAACAATCA TAAACAACAACGGCGCC AGAA GGCGCCGTTGTTGTATG TATTATTGAGTGCGG TERM 5218 4525399 - 4525432 + T 100 -19.7 -3.27902 | opp_overlap 4525401 4525404 4525407, overlap 4525397 4525401 4525404 4525407 AACGTAACAATCATA AACAACAACGGCGCC AGAA GGCGCCGTTGTTGTA TGTATTATTGAGTGC TERM 5219 4525401 - 4525430 + T 100 -22.3 -3.1991 | opp_overlap 4525401 4525404 4525407, overlap 4525399 4525397 4525404 4525407 CGTAACAATCATAAA CAACAACGGCGCC AGAA GGCGCCGTTGTTG TATGTATTATTGAGT TERM 5220 4525430 - 4525401 - T 100 -22.3 -4.14257 | opp_overlap 4525401 4525399 4525397 4525404 4525407, overlap 4525404 4525407 CGTAACAATCATAAA CAACAACGGCGCC AGAA GGCGCCGTTGTTG TATGTATTATTGAGT TERM 5221 4525427 - 4525404 - T 100 -18.2 -4.1774 | opp_overlap 4525401 4525399 4525397 4525404 4525407, overlap 4525401 4525407 AACAATCATAAACAA CAACGGCGCC AGAA GGCGCCGTTG TTGTATGTATTATTG TERM 5222 4525404 - 4525427 + T 100 -18.2 -3.72756 | opp_overlap 4525404 4525401 4525407, overlap 4525401 4525399 4525397 4525407 AACAATCATAAACAA CAACGGCGCC AGAA GGCGCCGTTG TTGTATGTATTATTG TERM 5223 4525424 - 4525407 - T 100 -14.1 -4.18213 | opp_overlap 4525404 4525401 4525399 4525397 4525407, overlap 4525404 4525401 AATCATAAACAACAA CGGCGCC AGAA GGCGCCG TTGTTGTATGTATTA TERM 5224 4525407 - 4525424 + T 100 -14.1 -3.9679 | opp_overlap 4525407 4525404 4525401, overlap 4525404 4525401 4525399 4525397 AATCATAAACAACAA CGGCGCC AGAA GGCGCCG TTGTTGTATGTATTA Shew185_3806 4526281 - 4525451 - | dehydratase Shew185_3807 4526697 - 4527470 + | methyltransferase type 11 TERM 5225 4527526 - 4527549 + T 100 -14.6 -3.8062 | GCAAGCCTGTTTCCA GCAGGCGCTA ACTT TGGCGCCTGC TTGTTCTAGCAATTG Shew185_3808 4528407 - 4527505 - | GumN family protein Shew185_3809 4528456 - 4528764 + | hypothetical protein TERM 5226 4530637 - 4530605 - g 100 -13.6 -5.40072 | opp_overlap 4530607 4530614 GCCCGGGCAAAAAAA CAGGCAAAATCCGC GAATA ACGGATTTTACCTG TTAGAAAATCACCTT Shew185_3810 4528925 - 4530682 + | diguanylate cyclase/phosphodiesterase TERM 5227 4530661 - 4530685 + T 100 -15.1 -3.06312 | opp_overlap 4530668, overlap 4530663 4530668 TCACCTTACTATCGA GACTCAAGCGC TCA GTGCTTGAGTC TTAAGTGACCGATTT TERM 5228 4530663 - 4530683 + T 82 -11.9 -3.08798 | opp_overlap 4530668, overlap 4530661 4530668 ACCTTACTATCGAGA CTCAAGCGC TCA GTGCTTGAG TCTTAAGTGACCGAT Shew185_3811 4531245 - 4530721 - | hypothetical protein Shew185_3812 4531522 - 4531830 + | hypothetical protein Shew185_3813 4531966 - 4532280 + | hypothetical protein Shew185_3814 4532803 - 4532294 - | hypothetical protein TERM 5229 4532848 - 4532817 - H 100 -16.2 -3.09234 | opp_overlap 4532822 4532825, overlap 4532819 4532822 4532825 ATAAACTTCACCTAA TAGAATAAGCCTTT CGCA AAAGGCTTATTCTA CACGATATTAAGGTT TERM 5230 4532846 - 4532819 - H 95 -14.4 -3.10071 | opp_overlap 4532822 4532825, overlap 4532817 4532822 4532825 AAACTTCACCTAATA GAATAAGCCTTT CGCA AAAGGCTTATTC TACACGATATTAAGG TERM 5231 4532822 - 4532843 + H 77 -10.3 -3.31248 | opp_overlap 4532819 4532817 4532822 4532825, overlap 4532825 CTTCACCTAATAGAA TAAGCCTTT CGCA AAAGGCTTA TTCTACACGATATTA TERM 5232 4532843 - 4532822 - H 80 -10.3 -3.68988 | opp_overlap 4532822 4532825, overlap 4532819 4532817 4532825 CTTCACCTAATAGAA TAAGCCTTT CGCA AAAGGCTTA TTCTACACGATATTA TERM 5233 4532825 - 4532840 + H 71 -7.6 -3.7941 | opp_overlap 4532822 4532819 4532817 4532825, overlap 4532822 CACCTAATAGAATAA GCCTTT CGCA AAAGGC TTATTCTACACGATA TERM 5234 4532840 - 4532825 - H 73 -7.6 -3.97511 | opp_overlap 4532825 4532822, overlap 4532822 4532819 4532817 CACCTAATAGAATAA GCCTTT CGCA AAAGGC TTATTCTACACGATA TERM 5235 4533223 - 4533243 + G 75 -7.7 -4.30844 | TTCCTATGTTGCCGC TGACGATAA GCA TTATTGTCA TTTTACTCCTGCAAT Shew185_3815 4532934 - 4533314 + | hypothetical protein Shew185_3816 4533398 - 4534195 + | response regulator receiver protein TERM 5236 4534484 - 4534468 - g 71 -2.9 -4.93547 | CGAATCAATGAAAAA TGGTGAC AAA ATCTCCA TCGTAGGCTTCGGTT Shew185_3817 4534355 - 4534627 + | histone family protein DNA-binding protein TERM 5237 4534664 - 4534647 - f 100 -8.4 -5.61824 | opp_overlap 4534647 GAAAATTCAAAAAAA CGCCTC CATTGT GAGGCG TTTTTTTTGCCCTAT TERM 5238 4534647 - 4534664 + F 100 -8.4 -5.79526 | opp_overlap 4534647 GAAAATTCAAAAAAA CGCCTC CATTGT GAGGCG TTTTTTTTGCCCTAT Shew185_3818 4534918 - 4535610 + | hypothetical protein TERM 5239 4535705 - 4535670 - T 79 -11.3 -2.73542 | opp_overlap 4535678, overlap 4535678 TCTAAGCCCTAAGCA TAAAAAAACGCCACC TTAAAC GGTGGCGTTGTCTTA TCACAATCATCCATT TERM 5240 4535678 - 4535697 + T 83 -10.7 -3.75378 | opp_overlap 4535678 4535670 CTAAGCATAAAAAAA CGCCACC TTAAAC GGTGGCG TTGTCTTATCACAAT TERM 5241 4535697 - 4535678 - T 100 -10.7 -5.71983 | opp_overlap 4535678, overlap 4535670 CTAAGCATAAAAAAA CGCCACC TTAAAC GGTGGCG TTGTCTTATCACAAT Shew185_3819 4536624 - 4535719 - | alpha-L-glutamate ligase Shew185_3820 4538519 - 4536786 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase Shew185_3821 4538963 - 4538529 - | response regulator receiver protein Shew185_3822 4541113 - 4538960 - | multi-sensor signal transduction histidine kinase Shew185_3823 4541439 - 4541615 + | hypothetical protein TERM 5242 4541720 - 4541750 + T 90 -9.6 -4.46835 | opp_overlap 4541719 4541721, overlap 4541721 4541724 CCACTCAGACCTAAT ATCTCACCCAGCCC TCA GTGCTGGGTGTGAC TTTGTTTAACCTTCT TERM 5243 4541721 - 4541749 + T 93 -13.1 -3.27017 | opp_overlap 4541719 4541721, overlap 4541720 4541724 CACTCAGACCTAATA TCTCACCCAGCCC TCA GTGCTGGGTGTGA CTTTGTTTAACCTTC TERM 5244 4541749 - 4541721 - T 91 -13.1 -3.12803 | opp_overlap 4541721 4541720 4541724, overlap 4541719 CACTCAGACCTAATA TCTCACCCAGCCC TCA GTGCTGGGTGTGA CTTTGTTTAACCTTC TERM 5245 4541724 - 4541746 + T 90 -13.4 -2.80589 | opp_overlap 4541721 4541719, overlap 4541721 4541720 TCAGACCTAATATCT CACCCAGCCC TCA GTGCTGGGTG TGACTTTGTTTAACC Shew185_3824 4542759 - 4541797 - | hypothetical protein Shew185_3825 4543038 - 4544393 + | hypothetical protein TERM 5246 4544442 - 4544425 - T 100 -7 -5.96894 | opp_overlap 4544425 ATTTAAATAAAAAAA GCTCAC AACTAG GTGAGC TTTTTTTATTCTAAC TERM 5247 4544425 - 4544442 + T 100 -7 -5.88565 | opp_overlap 4544425 ATTTAAATAAAAAAA GCTCAC AACTAG GTGAGC TTTTTTTATTCTAAC Shew185_3826 4545857 - 4544481 - | amino acid carrier protein TERM 5248 4545604 - 4545584 - G 83 -6.7 -4.87665 | opp_overlap 4545584 GGCCACCGACAAAAA TCGCCGTCG CCA CGCCCGCGA TATTACCCGTACCAA TERM 5249 4546086 - 4546110 + r 84 -10 -3.86346 | opp_overlap 4546086 CAACACAAATAAAAA CTCCCCGCAT TGAGT ATGCAGGGAG TTTATCGAGCAGTGC TERM 5250 4546110 - 4546086 - R 100 -12.2 -5.4659 | opp_overlap 4546086 CAACACAAATAAAAA CTCCCCGCAT TGAGT ATGCAGGGAG TTTATCGAGCAGTGC Shew185_3827 4547590 - 4546148 - | RNA-metabolising metallo-beta-lactamase Shew185_3828 4548583 - 4547708 - | hypothetical protein Shew185_3829 4549858 - 4548590 - | major facilitator transporter Shew185_3830 4550882 - 4549869 - | glyceraldehyde-3-phosphate dehydrogenase TERM 5251 4550009 - 4550023 + g 74 -6.4 -4.46212 | overlap 4550010 GCGCATCAACAATGC TCGATC GCG GATCGG TTTTGTAATCCACCG TERM 5252 4550976 - 4551014 + r 77 -10.2 -3.43412 | opp_overlap 4550967 4550973 4550976, overlap 4550973 4550971 CTTAAACGATAACAT CGCCATTGCCAAAGACTG AGA CTGAGTATGGCAATGGCG TGTATTTATTCGCTT TERM 5253 4551014 - 4550976 - R 72 -10.2 -2.62144 | opp_overlap 4550976 4550973 4550971, overlap 4550967 4550973 CTTAAACGATAACAT CGCCATTGCCAAAGACTG AGA CTGAGTATGGCAATGGCG TGTATTTATTCGCTT Shew185_3831 4551328 - 4551092 - | redox-active disulfide protein 2 Shew185_3832 4552333 - 4551338 - | permease TERM 5254 4551824 - 4551787 - G 88 -11.9 -3.87815 | overlap 4551823 GCTCAGTGGTAGAAA CCTCATTCGATGCCGCC ATCT GGCGTCCACGAACGAGG GCTTCGGCGGCGAAG TERM 5255 4552090 - 4552077 - G 85 -5.2 -5.31855 | GAGCAAGAACAAAAA GGCG TAATGG CGCC AAAAATCGACCCCAG Shew185_3833 4553394 - 4552381 - | arsenical-resistance protein Shew185_3834 4553794 - 4553450 - | regulatory protein ArsR Shew185_3835 4554139 - 4554792 + | hypothetical protein Shew185_3836 4555840 - 4554833 - | AraC family transcriptional regulator TERM 5256 4555915 - 4555878 - R 75 -7.9 -4.03234 | opp_overlap 4555880 TGTCGCTCACACAAA GATACCAGCTAATAC TCATTTAT GTATTAACGGGTATC TTGCACTTGTTGGCC Shew185_3837 4556627 - 4555932 - | isochorismatase hydrolase Shew185_3838 4557602 - 4557132 - | radical SAM domain-containing protein TERM 5257 4557601 - 4557579 - G 100 -13.5 -5.79595 | opp_overlap 4557579 CCTTAAAATAAAAAA TGCCCGATG GGGCT CATCGGGCA TTTTAGGAGTAAATA TERM 5258 4557579 - 4557601 + g 100 -14.2 -4.11692 | opp_overlap 4557579 CCTTAAAATAAAAAA TGCCCGATGG GGC TCATCGGGCA TTTTAGGAGTAAATA Shew185_3839 4557920 - 4557732 - | hypothetical protein Shew185_3840 4558406 - 4558080 - | antibiotic biosynthesis monooxygenase Shew185_3841 4558961 - 4558506 - | GCN5-related N-acetyltransferase TERM 5259 4559057 - 4559030 - R 100 -16.4 -5.38321 | overlap 4559054 AAAGACCATAAAAAA GCGCCTTAATCC GTGA GGACTAAGGCGC AAAGCTGTTGTGCAA Shew185_3842 4560753 - 4559125 - | EmrB/QacA family drug resistance transporter TERM 5260 4559676 - 4559665 - G 73 -3.6 -4.88228 | AGCGAACATTAAAAA GCCA AAGG CGGC GAGATATCGACTATC Shew185_3843 4561813 - 4560755 - | secretion protein HlyD family protein Shew185_3844 4561908 - 4562852 + | LysR family transcriptional regulator Shew185_3845 4563070 - 4563480 + | large-conductance mechanosensitive channel TERM 5261 4563505 - 4563532 + T 95 -11.4 -4.96848 | opp_overlap 4563510, overlap 4563510 AAAGTGCAGATCATA AAAAACCCATCG AACT CGATGGGTTTTG TTTTTATATCGGCGA TERM 5262 4563527 - 4563510 - T 100 -11.3 -5.34555 | opp_overlap 4563505 4563510 GCAGATCATAAAAAA CCCATCG AACT CGATGGG TTTTGTTTTTATATC TERM 5263 4563510 - 4563527 + T 100 -11.3 -5.38839 | opp_overlap 4563510, overlap 4563505 GCAGATCATAAAAAA CCCATCG AACT CGATGGG TTTTGTTTTTATATC Shew185_3846 4563896 - 4563573 - | antibiotic biosynthesis monooxygenase TERM 5264 4564002 - 4564057 + r 86 -12 -3.37879 | opp_overlap 4564010 4564011, overlap 4564010 CAATGTGATAACTCT GTCTACAATGTGGGCAATAACCCG AAATATAA CAAGTTATTGCCCACGTTGTCGGC TTACTTGAGGTTAAT TERM 5265 4564049 - 4564010 - R 75 -9.4 -3.29461 | opp_overlap 4564002 4564010, overlap 4564011 TAACTCTGTCTACAA TGTGGGCAATAACCCG AAATATAA CAAGTTATTGCCCACG TTGTCGGCTTACTTG TERM 5266 4564048 - 4564011 - R 90 -12.9 -2.57463 | opp_overlap 4564010 4564002, overlap 4564010 AACTCTGTCTACAAT GTGGGCAATAACCCG AAATATAA CAAGTTATTGCCCAC GTTGTCGGCTTACTT Shew185_3847 4567274 - 4564068 - | CzcA family heavy metal efflux protein TERM 5267 4565405 - 4565449 + g 79 -11.4 -3.14564 | opp_overlap 4565404 4565402 AGGCCAGCAAGATAG CTTCAAGTTTGGGCGCGACT GCCAA AGACGTGCCCAAACTCGCGG TTGGTGCCAGCGTGA Shew185_3848 4568576 - 4567305 - | RND family efflux transporter MFP subunit Shew185_3849 4570074 - 4568587 - | outer membrane efflux protein Shew185_3850 4570898 - 4570446 - | hypothetical protein TERM 5268 4571040 - 4571003 - R 79 -9.2 -3.91882 | overlap 4570998 4571023 GTATGATAAACATAA GTTCACAGCTCGCAAG CAAAGT CTTTCAAGCTGTGAGC TCTAAAGGCTAACGC Shew185_3851 4571303 - 4571094 - | hypothetical protein Shew185_3852 4571705 - 4571340 - | hypothetical protein Shew185_3853 4571842 - 4572273 + | hypothetical protein Shew185_3854 4572482 - 4572922 + | 3-dehydroquinate dehydratase Shew185_3855 4572958 - 4573407 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein Shew185_3856 4573488 - 4574165 + | short-chain dehydrogenase/reductase SDR TERM 5269 4574238 - 4574202 - T 73 -6.6 -4.2828 | GCGGATTGAGCAAAA CAGCTTCGAGACGC AAGATAGCA GCACCTCGAACCTG AGTGATCCGCTTGCT Shew185_3857 4575487 - 4574252 - | major facilitator transporter TERM 5270 4575535 - 4575558 + r 93 -12.5 -3.96224 | opp_overlap 4575535 TAGCTAATAAATAAA TTGGAGCCC ACTAAG GGGCTCCAA TTTCTCAGTCATTTA TERM 5271 4575558 - 4575535 - R 100 -12.5 -4.69214 | opp_overlap 4575535 TAGCTAATAAATAAA TTGGAGCCC ACTAAG GGGCTCCAA TTTCTCAGTCATTTA Shew185_3858 4576407 - 4575586 - | hypothetical protein TERM 5272 4578009 - 4577997 - g 80 -4.1 -5.24291 | AAAAGTAAAACAAAA GATCG ACT CAATC TGGGATGAGTTAGGC Shew185_3859 4576567 - 4578048 + | UbiD family decarboxylase TERM 5273 4578087 - 4578050 - f 76 -10.7 -2.61681 | overlap 4578049 4578053 4578074 GCCCAACCCTATAAT TCAGCTTAAGCCGTTAC TCAA ATATCGGCTTAAGCCAA GAGAATAGGCCAATA TERM 5274 4578084 - 4578053 - f 83 -12.4 -2.60555 | overlap 4578050 4578049 4578074 CAACCCTATAATTCA GCTTAAGCCGTTAC TCAA ATATCGGCTTAAGC CAAGAGAATAGGCCA Shew185_3860 4578163 - 4578873 + | FMN reductase TERM 5275 4578932 - 4578948 + T 100 -9.4 -5.29885 | opp_overlap 4578917 4578932 GGCTTAAATAATAAA CCCCAG CTTTA CTGGGG TTTTGTTTTTACATT TERM 5276 4578948 - 4578932 - T 91 -10.1 -4.56978 | opp_overlap 4578932, overlap 4578917 GGCTTAAATAATAAA CCCCAGC TTT ACTGGGG TTTTGTTTTTACATT Shew185_3861 4581344 - 4579242 - | hypothetical protein TERM 5277 4579412 - 4579435 + g 74 -6.8 -4.386 | CGAATTTTGTATATG TAGATGACAG TCGA CTCTCATCTA TTTTATCGCCAATTA TERM 5278 4579614 - 4579632 + g 73 -2.5 -5.06816 | gap 1, overlap 4579617 AATGTCAGGTCTTTT CAA-TCTG TTTT CAGAATTG TTTTTATTGAAAAGT TERM 5279 4581626 - 4581652 + H 72 -8.7 -3.53012 | opp_overlap 4581624 4581625 4581622, overlap 4581630 4581650 GTTGAAGAAAATAGC GTGACGCAGAC AGGAC GTCTGCGTAGC TTTCGGGGGGAAGGG TERM 5280 4581630 - 4581648 + H 72 -10.3 -2.64155 | opp_overlap 4581624 4581625 4581622, overlap 4581626 AAGAAAATAGCGTGA CGCAGAC AGGAC GTCTGCG TAGCTTTCGGGGGGA TERM 5281 4581791 - 4581813 + H 78 -7.6 -4.46652 | overlap 4581793 AGTCCTCCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTGATTTTTCTTTA TERM 5282 4582095 - 4582061 - H 78 -10.8 -3.03012 | overlap 4582058 ACTATTGAGAAATTA TCCCATAATGAGTCAA TAG CTGACGCAATATGGGA TTCAAGTACAAATGA Shew185_3862 4582107 - 4583798 + | amidohydrolase 3 Shew185_3863 4584699 - 4583818 - | LysR family transcriptional regulator TERM 5283 4584349 - 4584338 - G 71 -4.4 -4.66938 | ACTTTTAAGACAAAA TCCA GCGT TGGA AACTGCATTAAATAG Shew185_3864 4585551 - 4584922 - | flavoprotein oxygenase TERM 5284 4586265 - 4586240 - g 75 -10.5 -3.40784 | AATCAAACCCCAGAA GCCAATACCCA AGCC TCGGTATTGGC CAGAATGCTCACGCT TERM 5285 4587766 - 4587736 - g 73 -4.7 -4.83032 | opp_overlap 4587761, overlap 4587754 4587761 ATATCAAATAGAAAA CAGCAACTTGC AAGCCAACA GCAAGGCGCTG TTGCAGGCTTTAGGT Shew185_3865 4585814 - 4588207 + | fatty acid cistrans isomerase TERM 5286 4588210 - 4588237 + T 72 -8.4 -3.59979 | opp_overlap 4588214, overlap 4588214 GCAAAATCGTTAATA AAAAGGGGAACG CTAG CGTTCCCCTTGC TTTCAAATCCACCCA TERM 5287 4588233 - 4588214 - T 100 -13.6 -5.08088 | opp_overlap 4588210 4588214 AATCGTTAATAAAAA GGGGAACG CTAG CGTTCCCC TTGCTTTCAAATCCA TERM 5288 4588214 - 4588233 + T 95 -13.6 -3.53031 | opp_overlap 4588214, overlap 4588210 AATCGTTAATAAAAA GGGGAACG CTAG CGTTCCCC TTGCTTTCAAATCCA Shew185_3866 4590373 - 4588259 - | endothelin-converting protein 1 TERM 5289 4590566 - 4590582 + r 73 -9.4 -3.17941 | opp_overlap 4590566 TGCAGACACAAAAAA GCCGAC TTTAT GTCGGC TTAATCAAGTGTGGT TERM 5290 4590582 - 4590566 - R 100 -9.4 -5.4251 | opp_overlap 4590566 TGCAGACACAAAAAA GCCGAC TTTAT GTCGGC TTAATCAAGTGTGGT Shew185_3867 4591965 - 4590607 - | transcriptional regulator, CadC TERM 5291 4590764 - 4590754 - G 74 -6.8 -4.47328 | opp_overlap 4590753 AATTTCACGATAAAA CTGC ATG GCAG AATTGCTCACTTCAT TERM 5292 4591998 - 4592010 + r 71 -4.1 -4.88646 | GTGACTTGCAGCCAC CTATC TAA GATGG TTTATTTTACTTTTT Shew185_3868 4592985 - 4592110 - | copper ABC transporter, permease protein TERM 5293 4592646 - 4592632 - G 77 -6.4 -4.58395 | CGCATGGCCCAAAAA CTTGCC GCA GACAAG ATGCCAACGCTCCAA Shew185_3869 4594019 - 4592982 - | ABC transporter related Shew185_3870 4595302 - 4594016 - | periplasmic copper-binding TERM 5294 4595209 - 4595235 + g 76 -11 -3.09834 | CCTGCGCTAATGCTT GGGTTAAAGAGA CGG TATCTTTAACCC TTAGCTCCTGCGCTA Shew185_3871 4595804 - 4595313 - | NosL family protein TERM 5295 4595428 - 4595442 + g 71 -4.2 -4.77036 | AAAGGTGCGACTGCT GGCC CCATCAC GGCC TTTTTACTGGTACCG Shew185_3872 4596868 - 4595921 - | polysulphide reductase NrfD TERM 5296 4596756 - 4596744 - G 71 -4.7 -4.65895 | TGTCCTAGGTAAAAA CGCAG CGC CAGCG CAATGGTTAACGCCC Shew185_3873 4597578 - 4596871 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shew185_3874 4598339 - 4597665 - | formate-dependent nitrite reductase, NrfG protein Shew185_3875 4599196 - 4598417 - | FKBP-type peptidyl-prolyl isomerase domain-containing protein Shew185_3876 4599733 - 4599290 - | rhodanese domain-containing protein TERM 5297 4599503 - 4599493 - G 79 -2.4 -5.52909 | GAACATTGAAAAAAA CCGC TCC GGGG ACAAAACCTTCCGCC Shew185_3877 4601921 - 4599792 - | cytochrome c, putative TERM 5298 4602221 - 4602210 - H 74 -4.4 -4.94811 | TCAAAAATAAACAAA GTCA TAAA TGAC CATTTTAATGCCGAG TERM 5299 4602799 - 4602773 - g 79 -11.6 -3.14132 | GGGTGCGGTGATCAA TTGGCGTCAAGC GAC GCATAACGCCAA GCTCGCCAATTTACA TERM 5300 4603329 - 4603339 + G 79 -3.2 -5.18357 | GCTTTCTCACTCAGT TTGC TGG GCAG TTTTTTGGTACGTTC TERM 5301 4604376 - 4604349 - g 73 -8.3 -3.93695 | CGCATCAGCTATAAA CCCCTTGCCAG TTGGAT CTGGCTTGGGG CACTGCTAATGATGT Shew185_3878 4602432 - 4604498 + | cytochrome c-type biogenesis protein CcmF Shew185_3879 4604498 - 4604911 + | cytochrome C biogenesis protein TERM 5302 4604974 - 4604984 + G 77 -6.8 -4.55023 | TCTATGCGACTCATT CTGC TAT GCAG TTTTGTCCTGTTAAA TERM 5303 4605400 - 4605419 + G 91 -4.2 -5.55664 | opp_overlap 4605402, overlap 4605402 CAGATCATTCCTGCA AACGTCGT TCCT GCGACGTA TTTTTTTGATGCTAA TERM 5304 4605402 - 4605417 + G 74 -6.8 -4.41456 | opp_overlap 4605402, overlap 4605400 GATCATTCCTGCAAA CGTCGT TCCT GCGACG TATTTTTTTGATGCT Shew185_3880 4604947 - 4605531 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 5305 4605593 - 4605622 + F 90 -9.3 -5.09426 | opp_overlap 4605595, overlap 4605595 CCCTACATTTGCCGA AACCCGCTGCA CCCGAATT TGCAGCGGGTA TTTTTTACACTTAAG TERM 5306 4605620 - 4605595 - f 89 -11.9 -3.55071 | opp_overlap 4605593 4605595 CTACATTTGCCGAAA CCCGCTGCA CCCGAATT TGCAGCGGG TATTTTTTACACTTA TERM 5307 4605595 - 4605620 + F 95 -11.9 -4.17355 | opp_overlap 4605595, overlap 4605593 CTACATTTGCCGAAA CCCGCTGCA CCCGAATT TGCAGCGGG TATTTTTTACACTTA Shew185_3881 4605726 - 4606304 + | hypothetical protein Shew185_3882 4606569 - 4606378 - | XRE family transcriptional regulator Shew185_3883 4607117 - 4606599 - | hypothetical protein TERM 5308 4606853 - 4606842 - G 74 -4.4 -5.00616 | TTCGTCGCTAAAAAA CAAG CCGT CTTG ATAGTAGGCTAATAA TERM 5309 4609070 - 4609058 - g 75 -5.5 -4.73682 | opp_overlap 4609058 GTCGATAACATAAAA GCACC GCT GATGC TTATCCAAGGAGCGA Shew185_3884 4607276 - 4609336 + | peptidase S9 prolyl oligopeptidase Shew185_3885 4609442 - 4609753 + | putative mitomycin resistance protein Shew185_3886 4610844 - 4609765 - | hypothetical protein Shew185_3887 4611880 - 4610930 - | redoxin domain-containing protein Shew185_3888 4613118 - 4612069 - | 2-nitropropane dioxygenase NPD Shew185_3889 4613549 - 4613154 - | glyoxalase/bleomycin resistance protein/dioxygenase Shew185_3890 4613884 - 4614966 + | periplasmic sensory protein associated with the TorRS two-component regulatory system Shew185_3891 4615823 - 4614963 - | 4-hydroxybenzoate octaprenyltransferase Shew185_3892 4618130 - 4615962 - | DNA-dependent helicase II TERM 5310 4616253 - 4616239 - G 76 -7.1 -4.37092 | opp_overlap 4616239 ATCTCTTTGATAAAA CGCGA CGGCC TCGCG TAATCTTCGCGGCCA TERM 5311 4618594 - 4618575 - H 75 -2.8 -5.28826 | AAACTGTATAAAAAA CCGCTACC GCAA AATAGCAG ATTCCTATAGCATCA TERM 5312 4618790 - 4618804 + G 72 -5.7 -4.37198 | AATTAGATCTCAATT TTGGC AATCA GCCAA TTTTCACTTTAGCTT TERM 5313 4618986 - 4618972 - g 73 -3.6 -5.00138 | opp_overlap 4618974, overlap 4618974 TACTTAAATGAAAAA CAGTAT CCA ATACTA GTTGAGCTTGTTGAT TERM 5314 4619022 - 4619008 - g 83 -5 -5.24129 | overlap 4619010 CTTGTTGATAAAAAA TATTGC CTT GCAACA CATATTGTTAATTAC Shew185_3893 4618717 - 4619826 + | hypothetical protein TERM 5315 4620886 - 4620871 - g 71 -4.8 -4.53439 | GCAAATGGAAACAAA TCAATA AATT TATTGA GGTTTTCAGCCAAGC Shew185_3894 4620378 - 4621577 + | hypothetical protein Shew185_3895 4622058 - 4621603 - | NUDIX hydrolase Shew185_3896 4622988 - 4622110 - | protein of unknown function zinc metallopeptidase putative Shew185_3897 4623544 - 4623119 - | hypothetical protein Shew185_3898 4623795 - 4623556 - | hypothetical protein TERM 5316 4623585 - 4623606 + g 73 -2.1 -5.08601 | overlap 4623588 4623589 TTTGAGTGGCTTGTT CTATGGCCG TTTT CAGCCGTTG TTTTTCTTCCGCTGC TERM 5317 4625392 - 4625402 + G 73 -5.4 -4.49314 | CGAAGAACAAGGTTG GTTC AGT GAAC TTATTTTTGGTAATA TERM 5318 4625440 - 4625420 - g 73 -7.5 -4.15222 | opp_overlap 4625429 ATTTTTGGTAATAAA CGCCGCCAA GGT TTAGCGGAG ACCTTGTCCAAGCAA Shew185_3899 4624028 - 4625542 + | protein of unknown function DUF853 NPT hydrolase putative TERM 5319 4625657 - 4625678 + F 84 -10.3 -3.82824 | opp_overlap 4625655 TATTTCTTATACAGG TTAACGCTA GCAT TAGCGTTAA TTATTCTAAGTGATA Shew185_3900 4625921 - 4626043 + | hypothetical protein TERM 5320 4626085 - 4626104 + F 93 -8.6 -5.21236 | opp_overlap 4626085 4626083 CAAATAACACAAATA GGGTTAAC TCAG GTTAGCCC TTTTTATTGTGCATT Shew185_3901 4626324 - 4627280 + | TRAP transporter solute receptor TAXI family protein TERM 5321 4627325 - 4627346 + F 100 -13.1 -4.66537 | opp_overlap 4627321 AAACTAAGCGATCGA GATGCCGTT GAAT AACGGCATC TTTTATATTCAAACA TERM 5322 4627987 - 4627970 - g 74 -11.3 -2.86164 | opp_overlap 4627970, overlap 4627967 ATCATCAACCAATTA GCCTTCG GCAC CGAAGGC TTGTACGGCACACCA TERM 5323 4627970 - 4627987 + G 78 -11.3 -3.28712 | opp_overlap 4627970 4627967 ATCATCAACCAATTA GCCTTCG GCAC CGAAGGC TTGTACGGCACACCA TERM 5324 4628006 - 4628024 + G 71 -4.6 -4.55446 | TACGGCACACCAACC TATGTGTC GGC GACGTATA TTTTCCTGTTTATTC Shew185_3902 4627481 - 4629514 + | TRAP transporter, 4TM/12TM fusion protein TERM 5325 4629583 - 4629558 - g 100 -16.3 -2.68071 | overlap 4629555 4629554 TCTAAGGTAAAGCTA TGCTAGGCCTA TGTT TAGGCCTAGCA GGTACCCTGTGGGCG Shew185_3903 4629557 - 4629982 + | hypothetical protein Shew185_3904 4630993 - 4630010 - | diguanylate cyclase with PAS/PAC sensor TERM 5326 4630207 - 4630181 - G 70 -2.3 -4.86621 | gap 1, opp_overlap 4630182, overlap 4630182 ACCTTCAAGCAAAAA GCCCTG-TCGAT AAAC ATCGAGCAAGGA TTGTGCGAGCATAGC TERM 5327 4630419 - 4630409 - G 71 -6.8 -4.16305 | ATCGATAAAGAATAA TGCG CCG CGCA TCTCGGGTTGCAAAC Shew185_3905 4631471 - 4631136 - | peptidylprolyl isomerase FKBP-type Shew185_3906 4631621 - 4632133 + | thioredoxin TERM 5328 4632159 - 4632187 + T 85 -9 -4.20531 | opp_overlap 4632164, overlap 4632164 CTATTTCGCTCCCAT AAAAATACCCAG ACTCG CTGGGTATTTTG TTTTACGTGGATCTC TERM 5329 4632164 - 4632182 + T 90 -8.9 -5.10933 | opp_overlap 4632164, overlap 4632159 TCGCTCCCATAAAAA TACCCAG ACTCG CTGGGTA TTTTGTTTTACGTGG TERM 5330 4632182 - 4632164 - T 89 -8.9 -4.82901 | opp_overlap 4632164 4632159 TCGCTCCCATAAAAA TACCCAG ACTCG CTGGGTA TTTTGTTTTACGTGG Shew185_3907 4633615 - 4632215 - | anion transporter TERM 5331 4634380 - 4634391 + G 85 -3 -5.67283 | CTTCACTTGCCCCAT TACT TGCG AGTA TTTTTTATTTAGGTT Shew185_3908 4634226 - 4635392 + | major facilitator transporter Shew185_3909 4635702 - 4636403 + | pseudouridine synthase TERM 5332 4636728 - 4636707 - g 73 -3.7 -4.84363 | overlap 4636720 CTAAATGATTAAAAA TGAACTCAA TCTA CCGAGCTCA ATCGGCCTCAGCAAG TERM 5333 4637274 - 4637260 - g 80 -6.4 -4.73388 | AACGCCTATGAAAAA TCCGTC GAA GACAGA ATGCGCGCCGAAGTC TERM 5334 4637337 - 4637326 - g 73 -7.2 -4.16301 | AATCTAGAGAAAGAA CGCG TCAG CGCG CAAATTGCCGTCACC Shew185_3910 4636696 - 4637583 + | band 7 protein TERM 5335 4637611 - 4637636 + T 100 -14.9 -4.99435 | opp_overlap 4637611 CCCGACAATAAAAAA TCCCAGTGTTA GCCC TAACACTGGGA TTTTTCGTTATTCGC TERM 5336 4637636 - 4637611 - T 100 -14.9 -5.55769 | opp_overlap 4637611 CCCGACAATAAAAAA TCCCAGTGTTA GCCC TAACACTGGGA TTTTTCGTTATTCGC Shew185_3911 4639223 - 4637682 - | permease TERM 5337 4638962 - 4638940 - G 86 -13.4 -3.07307 | opp_overlap 4638928 4638930, overlap 4638929 GAAACGGCGATTGAA TCGACGCCTG TTT CTGGCGTCGA CACTAAAAAGGAGGT Shew185_3912 4639741 - 4639226 - | zinc-responsive transcriptional regulator TERM 5338 4639835 - 4639816 - H 91 -12.2 -3.97834 | TAATGCGAGTATAAA CCTTGGAG CCTA CTCCAAGG TCAAGGGGTAATTCA Shew185_3913 4640094 - 4641692 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 5339 4641703 - 4641731 + F 100 -13.2 -5.79595 | opp_overlap 4641703 ACTAATCGCCACTAA GCAGCCAGCACT CAATC AGTACTGGCTGC TTTTTTGTTTTACCA TERM 5340 4641731 - 4641703 - f 100 -15.4 -3.16921 | opp_overlap 4641703 ACTAATCGCCACTAA GCAGCCAGCACT CAATC AGTACTGGCTGC TTTTTTGTTTTACCA TERM 5341 4642244 - 4642261 + G 72 -11.3 -2.72344 | GTGAATTAACGGCCA CCACTGG TTAT CCAGTGG TCATTAAAGCTGACG Shew185_3914 4641823 - 4643121 + | phosphoribosylamine--glycine ligase TERM 5342 4643236 - 4643204 - f 81 -12.2 -2.78032 | opp_overlap 4643209, overlap 4643209 TCTCGCTGAAAAGAT CAAAATCCGATGAC CTCAT GTCATCGGATTTTT TTATGCAACTCTCAG TERM 5343 4643209 - 4643231 + F 100 -12.1 -5.61596 | opp_overlap 4643204 4643209 CTGAAAAGATCAAAA TCCGATGAC CTCAT GTCATCGGA TTTTTTTATGCAACT TERM 5344 4643231 - 4643209 - f 95 -12.1 -4.55826 | opp_overlap 4643209, overlap 4643204 CTGAAAAGATCAAAA TCCGATGAC CTCAT GTCATCGGA TTTTTTTATGCAACT TERM 5345 4643709 - 4643694 - g 71 -9 -3.59979 | opp_overlap 4643693 4643671, overlap 4643671 TGCGCGTACCGCAAA CGCTTC AGGC GAAGCG GCTTATCCGCAAATT Shew185_3915 4643221 - 4644561 + | transposase IS4 family protein TERM 5346 4644571 - 4644546 - f 100 -12.7 -5.35815 | overlap 4644548 4644567 TAGACCAAAGAAAAA TACCGTTCACT CTTA AGTGAACGGCA TTAGGCCAGACGCCG TERM 5347 4644569 - 4644548 - f 100 -13.1 -4.29436 | overlap 4644546 4644567 GACCAAAGAAAAATA CCGTTCACT CTTA AGTGAACGG CATTAGGCCAGACGC TERM 5348 4644577 - 4644587 + F 80 -2.4 -5.64274 | opp_overlap 4644567 GTGAACGGCATTAGG CCAG ACG CCGG TTTTTTTGTGCCTGA TERM 5349 4645485 - 4645462 - g 79 -3.7 -5.24129 | GGTGCCGATAAAAAA GACGGCCTC AGCATA GTGACCGCC CAAATGCCGAGCAAG TERM 5350 4646349 - 4646321 - g 83 -9.6 -4.28774 | opp_overlap 4646342 TCACTGAACGTAAAA CCATTAGCGTGC CCTAT GCAGGCCAATGG ACGACCACGGGCTGG TERM 5351 4646532 - 4646512 - g 71 -8.9 -3.61398 | GGGCTGGCGCAACAA CGCCTGCGC TTA GCGCAAGGG AAAAGTATCGAGTTT Shew185_3916 4644730 - 4647957 + | hypothetical protein TERM 5352 4648023 - 4648046 + F 95 -11.8 -4.65895 | opp_overlap 4648023 4648027, overlap 4648027 TACTAACGCAACTGA TAAACCTCGC TCTG GCGGGGTTTA TTTTTACCTGAAAAA TERM 5353 4648046 - 4648023 - f 70 -9.6 -2.57489 | opp_overlap 4648023 4648027, overlap 4648027 TACTAACGCAACTGA TAAACCTCGC TCTG GCGGGGTTTA TTTTTACCTGAAAAA TERM 5354 4648027 - 4648042 + F 86 -8.2 -4.89063 | opp_overlap 4648023 4648027, overlap 4648023 AACGCAACTGATAAA CCTCGC TCTG GCGGGG TTTATTTTTACCTGA Shew185_3917 4648152 - 4648379 + | hypothetical protein TERM 5355 4648401 - 4648429 + T 70 -5.9 -4.4715 | overlap 4648402 ATGCCAAAGATGTTA GTGCCCGGAGG CGATCGC CCTGCGGGCAA TTTTATCGATTAAAC TERM 5356 4648402 - 4648428 + T 75 -9.4 -3.27808 | overlap 4648401 TGCCAAAGATGTTAG TGCCCGGAGG CGATCGC CCTGCGGGCA ATTTTATCGATTAAA Shew185_3918 4649201 - 4648398 - | short chain dehydrogenase Shew185_3919 4651856 - 4649277 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 5357 4652275 - 4652246 - R 100 -15.1 -3.95219 | opp_overlap 4652251, overlap 4652251 TCTAAATGTCAGAAA TAAAACAGGCCCG CAAG CGGGCCTGTTTTC GCAAATCTGAAAATT TERM 5358 4652251 - 4652270 + r 100 -15 -4.10657 | opp_overlap 4652246 4652251 ATGTCAGAAATAAAA CAGGCCCG CAAG CGGGCCTG TTTTCGCAAATCTGA TERM 5359 4652270 - 4652251 - R 100 -15 -4.99645 | opp_overlap 4652251, overlap 4652246 ATGTCAGAAATAAAA CAGGCCCG CAAG CGGGCCTG TTTTCGCAAATCTGA Shew185_3920 4653353 - 4652289 - | uroporphyrinogen decarboxylase Shew185_3921 4653739 - 4653446 - | hypothetical protein TERM 5360 4653645 - 4653672 + g 100 -18.6 -5.34381 | opp_overlap 4653638 CTATAAACTTTACTC GCCCAACGATAG GTTT CTATCGTTGGGC TTTTTATTTGCATTT Shew185_3922 4653799 - 4654290 + | anti-RNA polymerase sigma 70 factor Shew185_3924 4655061 - 4654690 - | ISSod10, transposase OrfA TERM 5361 4654971 - 4654988 + g 75 -3.3 -5.12707 | opp_overlap 4654961, overlap 4654970 GCAAGGCAAGATATC GCATACG TTTG CGTGCGC TTTTTTCCGATTTCA TERM 5362 4655192 - 4655171 - R 100 -13.1 -4.84527 | opp_overlap 4655171 TCCAGACACGAAAAA GCCCTAACA TTGC TGTTAGGGC TTATCGAAATGTTGG TERM 5363 4655171 - 4655192 + r 93 -13.1 -3.33315 | opp_overlap 4655171 TCCAGACACGAAAAA GCCCTAACA TTGC TGTTAGGGC TTATCGAAATGTTGG TERM 5364 4656729 - 4656740 + r 72 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTGC TGTG TTTTTGATAAACAGT TERM 5365 4657246 - 4657262 + r 86 -9.4 -4.08546 | overlap 4657228 TTGGTCTTTCGGCGA GGGGGT TTTTC ACCCCC TTTATCGTTACTCAT TERM 5366 4658042 - 4658054 + r 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5367 4658560 - 4658530 - R 71 -9.8 -2.90194 | opp_overlap 4658548 4658552 4658553, overlap 4658533 4658539 AGTCGCTTAACCATA CAACCCAAATGAGT TTC ACTCACCTGAGTCG CATTGCGACCAGCTT TERM 5368 4658694 - 4658717 + r 88 -9 -4.56607 | opp_overlap 4658694, overlap 4658695 GTGTTTGAGAACTCA TGTTTAATGC TTGC GCATTAAACG TTTTGTAATTAATCA TERM 5369 4658695 - 4658716 + r 77 -10.3 -3.33241 | opp_overlap 4658694, overlap 4658694 TGTTTGAGAACTCAT GTTTAATGC TTGC GCATTAAAC GTTTTGTAATTAATC TERM 5370 4660729 - 4660743 + r 73 -8.6 -3.71917 | CCAGTTGGCTAGGGC TGCGTA TTC TACGCA TTTCCCGTTTCGCGT TERM 5371 4660753 - 4660787 + r 75 -10.1 -3.19192 | TACGCATTTCCCGTT TCGCGTCAAGGAGTT TTTAC AACTTCTTGCTGCGA TTAAATTAAGTGCCA TERM 5372 4661274 - 4661289 + r 90 -10.4 -4.42386 | opp_overlap 4661274 CTGACCTACAAAAAA GCCAGC TTGC GCTGGC TTTTGTACATCAAGC TERM 5373 4661289 - 4661274 - R 100 -10.4 -5.28176 | opp_overlap 4661274 CTGACCTACAAAAAA GCCAGC TTGC GCTGGC TTTTGTACATCAAGC Shew185_3925 4663995 - 4661323 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Shew185_3926 4664355 - 4665014 + | 2-deoxyglucose-6-phosphatase TERM 5374 4665044 - 4665025 - f 70 -9.2 -3.26307 | overlap 4665023 AATAACGCCATAACA CGCCTAGC CTTA GCTGGGCG GATAAGCTGAATTTT Shew185_3927 4665130 - 4665483 + | hypothetical protein TERM 5375 4665536 - 4665520 - T 100 -12.3 -5.4505 | opp_overlap 4665520 GTCGTCAATAAAAAA GCCAGAC ATT GTCTGGC TTTCTTGTTTCAATC TERM 5376 4665520 - 4665536 + T 100 -12.3 -4.58585 | opp_overlap 4665520 GTCGTCAATAAAAAA GCCAGAC ATT GTCTGGC TTTCTTGTTTCAATC TERM 5377 4665588 - 4665610 + T 71 -6.3 -4.15396 | overlap 4665608 TTTACACGTTCATCT GGCGTTAAA TACAT TTTATCGCC TTCTTTCATTTCGAA Shew185_3928 4667605 - 4665563 - | endothelin-converting protein 1 TERM 5378 4667658 - 4667683 + r 80 -7.7 -4.3739 | opp_overlap 4667651 CGCAAAACCTTAGCA TCTTGCTAC GCCCCACA GTAGCAAGA TTTTGTAAAAGGATA TERM 5379 4667802 - 4667775 - R 100 -11.4 -5.26316 | TCATCGCACAAAAAA TAAGGGCACAAC CTCA GTCATGCCCTTA AGATCTTCATATGCA Shew185_3929 4670038 - 4667825 - | patatin TERM 5380 4668405 - 4668393 - G 71 -9.1 -3.57106 | overlap 4668389 CCGAATCTAAAGTAA GCTCC ATA GGAGC TAAAATCCAAGTCCC Shew185_3930 4674832 - 4670339 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 5381 4675286 - 4675237 - R 95 -6 -5.68039 | gap 2, opp_overlap 4675253, overlap 4675241 4675246 4675253 AAAGTTACAAAAAAA TA-CAGGCAA-TAAAAAAGCGCTC AAAT GAGCGCTTTTTTAATCGACAGCTA AATTACTTTTTCTTT TERM 5382 4675281 - 4675241 - R 90 -11.4 -3.81806 | gap 1, opp_overlap 4675253, overlap 4675237 4675246 4675253 TTACAAAAAAATACA GGCAA-TAAAAAAGCGCTC AAAT GAGCGCTTTTTTAATCGAC AGCTAAATTACTTTT TERM 5383 4675275 - 4675246 - R 100 -16.7 -3.2657 | opp_overlap 4675253, overlap 4675241 4675237 4675253 AAAAAATACAGGCAA TAAAAAAGCGCTC AAAT GAGCGCTTTTTTA ATCGACAGCTAAATT TERM 5384 4675268 - 4675253 - R 100 -10.4 -5.49234 | opp_overlap 4675253, overlap 4675246 4675241 4675237 ACAGGCAATAAAAAA GCGCTC AAAT GAGCGC TTTTTTAATCGACAG TERM 5385 4675253 - 4675268 + r 93 -10.4 -5.14563 | opp_overlap 4675246 4675241 4675237 4675253 ACAGGCAATAAAAAA GCGCTC AAAT GAGCGC TTTTTTAATCGACAG Shew185_3932 4676716 - 4675289 - | dihydrolipoamide dehydrogenase TERM 5386 4676855 - 4676835 - R 100 -11.9 -5.14682 | opp_overlap 4676835 TCACAATAAACAAAA GGCTACTCA AGA TGAGCAGCC TTATATGCTTACAGA TERM 5387 4676835 - 4676855 + r 77 -9.7 -3.59946 | opp_overlap 4676835 TCACAATAAACAAAA GGCTACTCA AGA TGAGCAGCC TTATATGCTTACAGA Shew185_3933 4678861 - 4676864 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase TERM 5388 4678200 - 4678234 + g 90 -14.2 -3.05463 | GGTGCAGCAGGTGCT GCGGCCACTGGCGCTA CCG TAGCGGCAGGAGCCGC TTGGGTAGCAACCGT TERM 5389 4678582 - 4678630 + g 79 -11.6 -3.09635 | gap 1, opp_overlap 4678597, overlap 4678584 ATGCTGGTACCGCCT G-AGCGGGTGCAGCAACTGGAGC CGGA GCAGCAGCTGCCGCGCCCGCTGC TTGCATCATAGCAAT TERM 5390 4678584 - 4678627 + g 88 -14.4 -2.76263 | opp_overlap 4678597, overlap 4678582 GCTGGTACCGCCTGA GCGGGTGCAGCAACTGGAGC CGGA GCAGCAGCTGCCGCGCCCGC TGCTTGCATCATAGC Shew185_3934 4681540 - 4678874 - | pyruvate dehydrogenase subunit E1 TERM 5391 4679986 - 4680006 + g 83 -6.9 -4.95302 | opp_overlap 4679986, overlap 4679977 4679975 CTTCGTCAGGAATAA TTGGCACAA TGT TTTTGCCAA TTTTCTTGTCTTTCA Shew185_3935 4682374 - 4681622 - | transcriptional regulator PdhR TERM 5392 4682398 - 4682410 + r 91 -6.3 -5.47218 | opp_overlap 4682398 CAGCTCCGTTGTAAA TTGGT CTT ACCAA TTTTTTTGAGTGAGC TERM 5393 4682584 - 4682547 - R 91 -13.7 -2.62396 | gap 1, opp_overlap 4682547 TATGGGGTCAGACCA TTTGACAGTGCTGAGCTA TCT CAGCTCAG-ACTGCCAAA TTCTGCTATCGCTGT TERM 5394 4682547 - 4682584 + r 82 -10.8 -3.47841 | gap 1, opp_overlap 4682547 TATGGGGTCAGACCA TTTGACAGTGCTGAGCT ATCTC AGCTCAG-ACTGCCAAA TTCTGCTATCGCTGT Shew185_3936 4683465 - 4682614 - | regulatory protein AmpE Shew185_3937 4684098 - 4683535 - | N-acetyl-anhydromuranmyl-L-alanine amidase TERM 5395 4685222 - 4685212 - g 73 -3.2 -4.93877 | CTTGATCAAAGAAAA CCAC ATT ATGG CCTGTGGTGGCATTC Shew185_3939 4684682 - 4685563 + | nicotinate-nucleotide pyrophosphorylase Shew185_3940 4686244 - 4686597 + | methylation site containing protein TERM 5396 4686639 - 4686615 - T 100 -13 -4.07568 | opp_overlap 4686615, overlap 4686618 GCCCGTTTGGTAAAA GAACACCTTG CTAGT CAAGGTGTTC TTTTTTGCATTAGTA TERM 5397 4686615 - 4686639 + T 100 -13 -5.17576 | opp_overlap 4686615 4686618 GCCCGTTTGGTAAAA GAACACCTTG CTAGT CAAGGTGTTC TTTTTTGCATTAGTA TERM 5398 4686636 - 4686618 - T 85 -8.9 -4.17048 | opp_overlap 4686615, overlap 4686615 CGTTTGGTAAAAGAA CACCTTG CTAGT CAAGGTG TTCTTTTTTGCATTA Shew185_3941 4688139 - 4686781 - | O-antigen polymerase Shew185_3942 4688570 - 4690282 + | type IV-A pilus assembly ATPase PilB Shew185_3943 4690431 - 4691702 + | type II secretion system protein TERM 5399 4691826 - 4691838 + G 90 -7.7 -5.03715 | GCTTTATTTTTGCCG CTACC ATT GGTAG TTTTTTAAACGTGGT TERM 5400 4692189 - 4692203 + G 73 -5 -4.7373 | CTTGGCATTTTGGTC CAAGCT GGC AGTTTG TTTTTGCTAGCATAC Shew185_3944 4691744 - 4692670 + | prepilin peptidase TERM 5401 4692744 - 4692771 + G 71 -6.3 -4.15044 | GCCTTACAGGCGGTA TTGGCAGCGGT AAAACA ACGGTTGCCAA TTTATTCGCCGCCGA Shew185_3945 4692710 - 4693327 + | dephospho-CoA kinase Shew185_3946 4693320 - 4694054 + | hypothetical protein Shew185_3947 4694128 - 4694337 + | hypothetical protein Shew185_3948 4694414 - 4694806 + | mutator MutT protein TERM 5402 4694836 - 4694868 + F 89 -9.2 -4.74453 | gap 1, overlap 4694842 TTATTATTTCAATGC GCTCAGTCCCCGAAT CGCG GTTCGGGGA-TGTGC TTTTTCAATGTCTTA TERM 5403 4694842 - 4694863 + F 79 -10.9 -3.19102 | overlap 4694836 TTTCAATGCGCTCAG TCCCCGAAT CGCG GTTCGGGGA TGTGCTTTTTCAATG Shew185_3949 4695037 - 4695573 + | thioredoxin domain-containing protein TERM 5404 4695591 - 4695615 + T 93 -10.7 -4.91712 | opp_overlap 4695596, overlap 4695592 4695596 GACGCAGTACACACA ATAAAGGCCGC ATA GCGGCCTTTGG TTTTTATCCATTCAG TERM 5405 4695592 - 4695614 + T 100 -14.2 -3.54304 | opp_overlap 4695596, overlap 4695591 4695596 ACGCAGTACACACAA TAAAGGCCGC ATA GCGGCCTTTG GTTTTTATCCATTCA TERM 5406 4695596 - 4695610 + T 100 -12.8 -4.38116 | opp_overlap 4695596, overlap 4695592 4695591 AGTACACACAATAAA GGCCGC ATA GCGGCC TTTGGTTTTTATCCA TERM 5407 4695610 - 4695596 - T 100 -12.8 -4.43576 | opp_overlap 4695596 4695592 4695591 AGTACACACAATAAA GGCCGC ATA GCGGCC TTTGGTTTTTATCCA Shew185_3950 4696564 - 4695638 - | Ppx/GppA phosphatase Shew185_3951 4697881 - 4696565 - | ATP-dependent RNA helicase RhlB TERM 5408 4697152 - 4697178 + g 80 -7.4 -4.61162 | opp_overlap 4697152 4697174, overlap 4697174 TCAGCAACAAACGCA TCTTCTCTTCTT GCG AAGGATAGAAGA TTTCTTCTTTGATGT Shew185_3952 4698034 - 4698360 + | thioredoxin TERM 5409 4699731 - 4699708 - g 85 -6 -5.11937 | AAGAACTGCAAAAAA TGTGGATCCT GCGT AAGATCCTCA ATCCTATGGATGAAG Shew185_3953 4698570 - 4699835 + | transcription termination factor Rho TERM 5410 4699850 - 4699891 + T 100 -16.9 -3.01712 | gap 1, opp_overlap 4699862, overlap 4699862 AGCCATACAAGATTG CATGAATAATAAGGCCGCTC ACT GAGCGGCCTT-TTGTTTATG TATTAAAAAAGCCGC TERM 5411 4699880 - 4699862 - T 100 -16 -3.99374 | opp_overlap 4699850 4699862 TTGCATGAATAATAA GGCCGCTC ACT GAGCGGCC TTTTGTTTATGTATT TERM 5412 4699862 - 4699880 + T 100 -16 -5.08878 | opp_overlap 4699862, overlap 4699850 TTGCATGAATAATAA GGCCGCTC ACT GAGCGGCC TTTTGTTTATGTATT TERM 5413 4699915 - 4699902 - T 93 -9.5 -5.1675 | opp_overlap 4699899 4699902 TTATGTATTAAAAAA GCCGC GGGT GCGGC TAATCTTGATTCAAG TERM 5414 4699902 - 4699915 + T 71 -9.5 -2.80699 | opp_overlap 4699902, overlap 4699899 TTATGTATTAAAAAA GCCGC GGGT GCGGC TAATCTTGATTCAAG Shew185_3954 4703393 - 4699935 - | hypothetical protein Shew185_3955 4704285 - 4703416 - | hypothetical protein TERM 5415 4704190 - 4704157 - G 71 -8.3 -3.75153 | gap 1, overlap 4704161 CGTGGCTAACTCAAA TTCATT-GACAGCCAA TAC TTGGCCGACAAATGAA AAACTGGCCAGCATC TERM 5416 4704850 - 4704834 - R 70 -3 -5.14985 | CCAAAGATACAAAAA GATACA TCTGT TGCATC ATACGCACGAACAAA TERM 5417 4704927 - 4704887 - R 72 -8.5 -3.56558 | opp_overlap 4704894, overlap 4704890 TTACAACTCACACAA GAGCTAACTCATATTAAAT TAA AATAAATATGAGTTAGATC AGAAAAATCCAGAAA Shew185_3956 4706000 - 4705071 - | LysR family transcriptional regulator Shew185_3957 4706135 - 4707157 + | zinc-binding alcohol dehydrogenase Shew185_3958 4707154 - 4707438 + | antibiotic biosynthesis monooxygenase TERM 5418 4707450 - 4707468 + T 90 -10.3 -4.32034 | opp_overlap 4707450 TTAGTCAATAAAAAA GCGCCAA ACATG TTGGCGC TTTTCATAATGATCA TERM 5419 4707468 - 4707450 - T 100 -10.3 -5.4833 | opp_overlap 4707450 TTAGTCAATAAAAAA GCGCCAA ACATG TTGGCGC TTTTCATAATGATCA Shew185_3959 4708219 - 4707488 - | fumarate reductase iron-sulfur subunit Shew185_3960 4710225 - 4708219 - | fumarate reductase flavoprotein subunit TERM 5420 4708979 - 4708946 - G 71 -7.5 -4.03234 | TTGTTCTCACAGAAA TCGGCGACATATTTA CCAA TAATCATGCCGCCAA CCACGGTTTCGGCCA Shew185_3961 4711006 - 4710335 - | fumarate reductase respiratory complex transmembrane subunit Shew185_3962 4711901 - 4711179 - | fumarate reductase cytochrome b-556 subunit TERM 5421 4712082 - 4712067 - H 71 -4.8 -4.57304 | ACCGAACCAAACAAA GTTAAT GCCA ATTAAC CAATATATTTCAGAG Shew185_3963 4712286 - 4713167 + | ribosomal protein L11 methyltransferase TERM 5422 4713175 - 4713198 + F 90 -13.2 -2.53759 | gap 1, opp_overlap 4713167 4713175 4713176, overlap 4713197 GTAAATAGCGCTAAA G-GGTGGCGCA ACA TGCGCCACCGC TGGCTTCCAACTATT TERM 5423 4713197 - 4713175 - f 95 -13.4 -3.62518 | opp_overlap 4713175, overlap 4713167 4713176 GTAAATAGCGCTAAA GGGTGGCGCA ACA TGCGCCACCG CTGGCTTCCAACTAT TERM 5424 4713196 - 4713176 - f 100 -16.9 -2.77029 | opp_overlap 4713175, overlap 4713167 4713175 TAAATAGCGCTAAAG GGTGGCGCA ACA TGCGCCACC GCTGGCTTCCAACTA TERM 5425 4713312 - 4713298 - f 74 -4.2 -5.07486 | opp_overlap 4713298, overlap 4713300 4713309 CACGGCCAACAAAAA GGGCTA CTA TAGCGC CCCTTTGAAGAGCTA TERM 5426 4713679 - 4713665 - g 74 -2.8 -5.17507 | AAAAGTGAATAAAAA GCTG GCTGGCT CAGC GCTGATGCAAAACCC Shew185_3964 4713342 - 4714310 + | nifR3 family TIM-barrel protein Shew185_3965 4714327 - 4714632 + | Fis family transcriptional regulator TERM 5427 4714694 - 4714665 - f 91 -10.9 -4.42386 | opp_overlap 4714671, overlap 4714671 GTTGTATTGAGAAAA GAAAAAGCCTGAA GAAA TTCAGGCTTTTTT GCTTTCTGATACATC TERM 5428 4714671 - 4714688 + F 100 -9.9 -5.42514 | opp_overlap 4714671 4714665 TTGAGAAAAGAAAAA GCCTGAA GAAA TTCAGGC TTTTTTGCTTTCTGA TERM 5429 4714688 - 4714671 - f 100 -9.9 -5.54907 | opp_overlap 4714671, overlap 4714665 TTGAGAAAAGAAAAA GCCTGAA GAAA TTCAGGC TTTTTTGCTTTCTGA Shew185_3966 4714974 - 4717964 + | UvrD/REP helicase TERM 5430 4718638 - 4718614 - g 85 -9.9 -4.39828 | AATATTCTGAGAAAA TGGTGCGCGCC CAC GGTGAGCACCA TGCCGAAATTATTCC Shew185_3967 4718193 - 4719002 + | hemerythrin HHE cation binding domain-containing protein TERM 5431 4719060 - 4719079 + F 90 -11.4 -3.85389 | TCCGCAGAATCTTGA GGCCGGAC CTAA GTCTGGCC TTTCAATTGTTGACG Shew185_3968 4719134 - 4719637 + | putative transcriptional regulator Shew185_3969 4720245 - 4719667 - | HupE/UreJ protein Shew185_3970 4721100 - 4720369 - | HAD family hydrolase TERM 5432 4720810 - 4720792 - G 74 -6.6 -4.37486 | ATGAAAATAAAAACA CGCCAATC CTT GCTCGGCG CCGCGTTCGGCTTCA Shew185_3971 4722020 - 4721100 - | tyrosine recombinase XerC Shew185_3972 4722706 - 4722077 - | hypothetical protein Shew185_3973 4723530 - 4722703 - | diaminopimelate epimerase Shew185_3974 4724851 - 4723607 - | diaminopimelate decarboxylase TERM 5433 4723939 - 4723967 + g 85 -7.4 -4.88918 | opp_overlap 4723949, overlap 4723942 AGTCATTCATCGCAC CATCGACAATCG CAAAA CGTTTGTCGCTG TTTTCTTTAAGATAC TERM 5434 4724019 - 4724002 - G 75 -3.3 -5.1356 | overlap 4724004 CCTGAGTAACAAAAA TCCCCGC ATTG GCGGCAA TCGCACGGCCCGGTT Shew185_3975 4725106 - 4724915 - | hypothetical protein Shew185_3976 4725186 - 4725515 + | frataxin family protein TERM 5435 4725557 - 4725580 + T 100 -14 -4.1891 | opp_overlap 4725557 4725560, overlap 4725560 AATAGTGCAAAACAA TAATGGGAGC CTTG GCTCCCATTA TTTATGTTAAAAAAC TERM 5436 4725580 - 4725557 - T 100 -14 -4.2142 | opp_overlap 4725557 4725560, overlap 4725560 AATAGTGCAAAACAA TAATGGGAGC CTTG GCTCCCATTA TTTATGTTAAAAAAC TERM 5437 4725560 - 4725577 + T 93 -11.3 -4.21773 | opp_overlap 4725557 4725560, overlap 4725557 AGTGCAAAACAATAA TGGGAGC CTTG GCTCCCA TTATTTATGTTAAAA TERM 5438 4725577 - 4725560 - T 93 -11.3 -4.21471 | opp_overlap 4725560 4725557, overlap 4725557 AGTGCAAAACAATAA TGGGAGC CTTG GCTCCCA TTATTTATGTTAAAA Shew185_3977 4728011 - 4725600 - | adenylate cyclase TERM 5439 4726457 - 4726444 - G 71 -6.7 -4.2717 | ATCAGCTTACGAAAA TGCCA CGGC TGGCA TAAGTCCCGTTTCGA Shew185_3978 4728214 - 4729146 + | porphobilinogen deaminase Shew185_3979 4729151 - 4729891 + | uroporphyrinogen III synthase HEM4 TERM 5440 4730371 - 4730357 - g 70 -2.1 -4.84262 | CAAGAATTAACAAAA TTGGC AGAAG ACCAA AATCAACTGCAGGAC Shew185_3980 4729952 - 4731133 + | protein of unknown function DUF513 hemX TERM 5441 4731569 - 4731530 - g 81 -3.7 -5.52023 | gap 2, opp_overlap 4731553, overlap 4731532 AGTATCAACAAAAAA TA-GCCG-AGCGAGATCAA TATC TTGATCGCGCTGCAGCGCA ACCTCTTGCCGCGAA TERM 5442 4731566 - 4731532 - g 90 -10.1 -4.39002 | gap 1, opp_overlap 4731553, overlap 4731530 TATCAACAAAAAATA GCCG-AGCGAGATCAA TATC TTGATCGCGCTGCAGC GCAACCTCTTGCCGC Shew185_3981 4731130 - 4732296 + | HemY domain-containing protein TERM 5443 4732358 - 4732314 - f 88 -11.6 -3.78778 | gap 1, opp_overlap 4732320, overlap 4732320 CTACTACATCAATAA TGATAA-CGCCGTGATTCGCA CTGT TGTGAGTCACGGCGTTTACCA CTCACGAAAGTTCTT TERM 5444 4732351 - 4732320 - f 95 -13 -3.6216 | opp_overlap 4732320, overlap 4732314 CATCAATAATGATAA CGCCGTGATTCGCA CTGT TGTGAGTCACGGCG TTTACCACTCACGAA TERM 5445 4732320 - 4732351 + F 100 -17.4 -3.57144 | opp_overlap 4732320 4732314 CATCAATAATGATAA CGCCGTGATTCGCA CTGT TGTGAGTCACGGCG TTTACCACTCACGAA TERM 5446 4733261 - 4733245 - g 81 -10.9 -3.71998 | opp_overlap 4733247 GACCGATGAAGATAA CATTGCC ACT GGCAATG TGCTCGATAATGACA TERM 5447 4751016 - 4750999 - g 70 -9.9 -3.14961 | overlap 4750997 AGCAGTATCAAGAGA GTCAGGT ACAG ACCTGAC CAATACTGCAACAGA TERM 5448 4751279 - 4751266 - g 85 -8.1 -4.7173 | overlap 4751268 4751269 TACGACACTGAAAAA CAGCG CTAC CGCTG AAGGCAGCGGCACTG Shew185_3982 4732694 - 4752745 + | putative outer membrane adhesin like proteiin TERM 5449 4752752 - 4752793 + F 70 -9.5 -2.73364 | opp_overlap 4752752 4752755 4752775 ATTCCTTAAATAAAA TCAGTTCAGATGGCCTATA GAAA TATAGGCCATCATGACCGA TACTTGCCATAACCA TERM 5450 4752793 - 4752752 - f 95 -11.2 -4.87133 | opp_overlap 4752752, overlap 4752755 4752775 ATTCCTTAAATAAAA TCAGTTCA-GATGGCCTATA GAAA TATAGGCCATCATG-ACCGA TACTTGCCATAACCA TERM 5451 4752791 - 4752755 - f 86 -11.8 -3.32684 | gap 1, opp_overlap 4752752, overlap 4752752 4752775 CCTTAAATAAAATCA GTTCA-GATGGCCTATA GAAA TATAGGCCATCATGACC GATACTTGCCATAAC Shew185_3983 4752837 - 4755014 + | ABC transporter related Shew185_3984 4755011 - 4756393 + | HlyD family type I secretion membrane fusion protein Shew185_3985 4756421 - 4757842 + | TolC family type I secretion outer membrane protein Shew185_3986 4757839 - 4758447 + | OmpA/MotB domain-containing protein Shew185_3987 4758467 - 4759174 + | hypothetical protein TERM 5452 4761037 - 4761025 - g 80 -4.8 -5.10461 | GGTATTCAAGAAAAA GCTC AGCTA GAGC GCTTTAACGAGCTTA Shew185_3988 4759183 - 4761102 + | diguanylate cyclase/phosphodiesterase TERM 5453 4761154 - 4761129 - f 95 -11.3 -5.01042 | opp_overlap 4761129 4761135, overlap 4761135 AAGTGAAATTAAAAA CAAAAAGCTCC GTAA GGAGCTTTTTA CTTTTCTAACGACAG TERM 5454 4761129 - 4761154 + F 70 -9.1 -3.21934 | opp_overlap 4761129 4761135, overlap 4761135 AAGTGAAATTAAAAA CAAAAAGCTCC GTAA GGAGCTTTTTA CTTTTCTAACGACAG TERM 5455 4761148 - 4761135 - f 100 -8.1 -5.67529 | opp_overlap 4761129 4761135, overlap 4761129 AATTAAAAACAAAAA GCTCC GTAA GGAGC TTTTTACTTTTCTAA TERM 5456 4761135 - 4761148 + F 88 -8.1 -5.1417 | opp_overlap 4761135 4761129, overlap 4761129 AATTAAAAACAAAAA GCTCC GTAA GGAGC TTTTTACTTTTCTAA TERM 5457 4761463 - 4761434 - f 70 -3 -5.1287 | gap 2, opp_overlap 4761427 CGCAGATGCAAAAAA GCCCCAGTGCATTC ATTA GAAT--ACTGAGGC TTTTTTACTTATTTG Shew185_3989 4762418 - 4765066 + | diguanylate cyclase/phosphodiesterase with GAF sensor Shew185_3990 4767126 - 4765114 - | ATP-dependent DNA helicase Rep TERM 5458 4766922 - 4766934 + g 76 -9.1 -3.83026 | TGCGTCCCATGGACT GAGCG ACC CGCTC TTTCATCTCACGGGC Shew185_3991 4767361 - 4767615 + | hypothetical protein TERM 5459 4767666 - 4767640 - f 76 -7.3 -4.16842 | gap 1, opp_overlap 4767640 CGCATGTTGAATAAA GCACAG-TGAGC GAAA GCGCAGCTGTGC TTTTTTTGTTTTTAA TERM 5460 4767640 - 4767666 + F 100 -7.3 -6.20267 | gap 1, opp_overlap 4767640 CGCATGTTGAATAAA GCACAG-TGAGC GAAA GCGCAGCTGTGC TTTTTTTGTTTTTAA Shew185_3992 4767713 - 4768057 + | hypothetical protein Shew185_3993 4768128 - 4768475 + | hypothetical protein Shew185_3994 4769644 - 4768472 - | hypothetical protein TERM 5461 4769942 - 4769957 + G 73 -4.7 -4.76644 | CCGCAAAACGGGCAA TGGCA CTAAGC TGCCA TTTTTGATGAATATT Shew185_3995 4769892 - 4770398 + | hypothetical protein TERM 5462 4770623 - 4770636 + G 70 -9.5 -3.20617 | overlap 4770622 GTTCAACATTATCGT GGGCG TCAT CGCCC TATTCACTTTGGCAT Shew185_3996 4770606 - 4772084 + | hypothetical protein TERM 5463 4772114 - 4772143 + F 100 -7.1 -5.7946 | opp_overlap 4772113, overlap 4772115 TCCACCCTTGAAGAC CCCCGACAGCG CCACTTTT TGCTGTCGGGA TTTTTTTATTGGCAA TERM 5464 4772115 - 4772142 + F 88 -10.6 -4.06592 | opp_overlap 4772113, overlap 4772114 CCACCCTTGAAGACC CCCGACAGCG CCACTTTT TGCTGTCGGG ATTTTTTTATTGGCA TERM 5465 4772521 - 4772539 + G 71 -4.5 -4.65895 | opp_overlap 4772519 4772521, overlap 4772523 ATCCTATTTTAAAGA GCCCAGA CCTAA TCTGGTC TTTTTGGCTAAGCAA Shew185_3997 4772132 - 4772989 + | phosphoesterase PA-phosphatase related TERM 5466 4773060 - 4773030 - T 88 -11.2 -3.64822 | opp_overlap 4773030 AGCCTTTCACTCAAA TACTTAGGCCTTGC TAA GCACTGCCTAAGTA TTTGACCACTAAGGT TERM 5467 4773030 - 4773060 + T 88 -11.2 -3.55563 | opp_overlap 4773030 AGCCTTTCACTCAAA TACTTAGGCCTTGC TAA GCACTGCCTAAGTA TTTGACCACTAAGGT Shew185_3998 4773768 - 4773043 - | ABC-type amino acid transport/signal transduction system TERM 5468 4774420 - 4774410 - g 77 -6.8 -4.56597 | CTTTGTGTTGAAAAA GGTC AAG GACC ACACGGCCATTCCCT Shew185_3999 4773961 - 4774461 + | AsnC family transcriptional regulator Shew185_4000 4774830 - 4776194 + | sodium:neurotransmitter symporter TERM 5469 4776237 - 4776207 - T 87 -12.7 -3.38071 | opp_overlap 4776213, overlap 4776213 TAAACCTTTAAAAAG CAAAAATCCCCGC TAAGT GCGGGGATTTTTT ATTTAGCTATTAACA TERM 5470 4776231 - 4776213 - T 100 -11.7 -5.18355 | opp_overlap 4776213, overlap 4776207 TTTAAAAAGCAAAAA TCCCCGC TAAGT GCGGGGA TTTTTTATTTAGCTA TERM 5471 4776213 - 4776231 + T 100 -11.7 -5.65927 | opp_overlap 4776213 4776207 TTTAAAAAGCAAAAA TCCCCGC TAAGT GCGGGGA TTTTTTATTTAGCTA Shew185_4001 4777145 - 4776282 - | import inner membrane translocase subunit Tim44 Shew185_4002 4777760 - 4778608 + | hypothetical protein Shew185_4003 4778733 - 4778861 + | hypothetical protein TERM 5472 4778867 - 4778883 + T 90 -9.4 -4.323 | opp_overlap 4778867 AACAAAATAAAAAAA TCCCCG CATTA CGGGGA TTTTCAATATTTCAA TERM 5473 4778883 - 4778867 - T 100 -10.1 -6.17669 | opp_overlap 4778867 AACAAAATAAAAAAA TCCCCGC ATT ACGGGGA TTTTCAATATTTCAA Shew185_4004 4779180 - 4778920 - | hypothetical protein Shew185_4005 4780315 - 4779182 - | Serine--pyruvate transaminase TERM 5474 4780492 - 4780477 - R 100 -11.8 -5.33785 | opp_overlap 4780476 4780473 AACTACCACAAAAAA GGGCGC ATGT GCGCCC CTCCTTTAGCCTAAC Shew185_4006 4782155 - 4780560 - | threonine dehydratase Shew185_4007 4784031 - 4782157 - | dihydroxy-acid dehydratase Shew185_4008 4784462 - 4784205 - | acetolactate synthase 2 regulatory subunit Shew185_4009 4786132 - 4784459 - | acetolactate synthase 2 catalytic subunit TERM 5475 4786221 - 4786269 + r 90 -11 -4.28049 | gap 1, opp_overlap 4786225 4786232, overlap 4786232 CTTGCTCTAGGCCCT GAAACGAAA-AACCCCCCGGTCC TTTC GGAGCGGGGGGTTCTTTCGAAAC TTTTAACCTTTTAGG TERM 5476 4786265 - 4786225 - R 100 -19.2 -3.54424 | gap 1, opp_overlap 4786221 4786232, overlap 4786232 CTCTAGGCCCTGAAA CGAAA-AACCCCCCGGTCC TTTC GGAGCGGGGGGTTCTTTCG AAACTTTTAACCTTT TERM 5477 4786257 - 4786232 - R 100 -16.1 -4.98531 | opp_overlap 4786221 4786232, overlap 4786225 CCCTGAAACGAAAAA CCCCCCGGTCC TTTC GGAGCGGGGGG TTCTTTCGAAACTTT TERM 5478 4786232 - 4786257 + r 100 -16.1 -3.92832 | opp_overlap 4786232 4786225, overlap 4786221 CCCTGAAACGAAAAA CCCCCCGGTCC TTTC GGAGCGGGGGG TTCTTTCGAAACTTT TERM 5479 4786845 - 4786817 - R 72 -10.4 -2.52464 | TTGCTTGGGAACTGA GCTGAGACCCAA GTCCT TTGAGTCTCAAC CCTCTCCCCCAATGT TERM 5480 4786855 - 4786896 + r 70 -9.7 -2.54059 | gap 1, overlap 4786853 4786852 4786854 4786857 CTCAACCCTCTCCCC CAATGTTG-GGCTTAATTAA CGA TCAATTAAGCCTCAACAATG CTCTTCATATCTGTC Shew185_4010 4788359 - 4786881 - | ketol-acid reductoisomerase Shew185_4011 4788607 - 4789479 + | DNA-binding transcriptional regulator IlvY Shew185_4012 4790792 - 4789476 - | hypothetical protein TERM 5481 4790342 - 4790331 - G 71 -4.4 -4.66609 | CATGCCATTGAAAAA CCAT ACTA ATGG ACGCAATAGCACAAT TERM 5482 4790504 - 4790484 - G 70 -2.5 -4.84219 | overlap 4790485 AAAGGATAAAATAAA GCTCAGTTG GCT CAACCAAGG ATCGGTCAGCAAAGG Shew185_4014 4793360 - 4791543 - | diguanylate cyclase Shew185_4015 4794401 - 4793373 - | periplasmic sugar-binding protein, putative TERM 5483 4794304 - 4794292 - G 81 -7.7 -4.56775 | ACGTCCCCCCAAAAA CTGTC ATC GACAG CCCCGGGATTAAAAA Shew185_4016 4794935 - 4796461 + | Mg chelatase, subunit ChlI TERM 5484 4796873 - 4796883 + G 71 -4.6 -4.56597 | overlap 4796881 4796881 GGTGGATATCCTGAT CCTG CAG CGGG TTTTTAACCGAAAAA Shew185_4017 4796571 - 4797473 + | phospholipid/glycerol acyltransferase Shew185_4018 4797481 - 4798425 + | phospholipid/glycerol acyltransferase TERM 5485 4798419 - 4798439 + T 77 -6.2 -4.51799 | CAATCACACTCAAGC GAGCTAGA TCTGC TCTAGTTC TTTTCTAACTTTGCT Shew185_4019 4798938 - 4798444 - | hypothetical protein Shew185_4020 4799239 - 4800006 + | GntR family transcriptional regulator Shew185_4021 4800064 - 4800942 + | 2-methylisocitrate lyase TERM 5486 4802071 - 4802058 - g 77 -4.5 -4.8543 | overlap 4802059 4802060 GAATGGTCAGAAAAA CTGGC TGCC GCCAA CGGTGACGACCGTCT TERM 5487 4802140 - 4802152 + G 74 -4.1 -5.00616 | opp_overlap 4802129 AACAGAAAAAACTCT TCTGT AAT GCAGA TTTTTTCCACGCCAG Shew185_4022 4801218 - 4802345 + | methylcitrate synthase TERM 5488 4802361 - 4802416 + F 88 -11.5 -3.67175 | gap 2, opp_overlap 4802388, overlap 4802360 4802362 GCCAAGCTAACGACT CTTGGCGCGAGACT-TCTGTT-AAAGA AATG TCTGTGAATAGACAGTCTCGCGCCAAC TTCATTTTCCGAAAT TERM 5489 4802362 - 4802415 + F 95 -15 -2.79823 | gap 2, opp_overlap 4802388, overlap 4802360 4802361 CCAAGCTAACGACTC TTGGCGCGAGACT-TCTGTT-AAAGA AATG TCTGTGAATAGACAGTCTCGCGCCAA CTTCATTTTCCGAAA Shew185_4023 4802430 - 4805045 + | aconitate hydratase TERM 5490 4805101 - 4805047 - f 89 -12.2 -3.59315 | opp_overlap 4805057 CGAATCAGGCTTAAA TCGAACCTTGCTTGAGTCGAGTCTTG AAT CAAGGCTCGGCTCAAGTAAAACGCGA ATATCAGCTAAAGAT TERM 5491 4805170 - 4805129 - f 80 -10.3 -3.69333 | opp_overlap 4805130 4805131 4805133, overlap 4805130 GATAAGCTAGCGAAA CCGAGCGCCAATAACTT CCCCAATT AAGTTACTGGCGCTCAT TTGGATTCCATTGGG TERM 5492 4805169 - 4805130 - f 91 -13.8 -2.81118 | opp_overlap 4805130 4805131 4805133, overlap 4805129 ATAAGCTAGCGAAAC CGAGCGCCAATAACTT CCCCAATT AAGTTACTGGCGCTCA TTTGGATTCCATTGG TERM 5493 4805130 - 4805169 + F 79 -9.4 -3.78409 | opp_overlap 4805130 4805129, overlap 4805131 4805133 ATAAGCTAGCGAAAC CGAGCGCCAATAACTT CCCCAATT AAGTTACTGGCGCTCA TTTGGATTCCATTGG TERM 5494 4805131 - 4805168 + F 90 -12.9 -2.86564 | opp_overlap 4805130 4805129, overlap 4805130 4805133 TAAGCTAGCGAAACC GAGCGCCAATAACTT CCCCAATT AAGTTACTGGCGCTC ATTTGGATTCCATTG TERM 5495 4805133 - 4805166 + F 72 -9.7 -2.97588 | opp_overlap 4805130 4805129, overlap 4805131 4805130 AGCTAGCGAAACCGA GCGCCAATAACTT CCCCAATT AAGTTACTGGCGC TCATTTGGATTCCAT TERM 5496 4805173 - 4805190 + F 77 -7.7 -4.15006 | TACTGGCGCTCATTT GGATTCC ATTG GGAGTCC TTTTGGAGTCAATCT TERM 5497 4805268 - 4805242 - g 73 -7.9 -4.05788 | opp_overlap 4805242, overlap 4805237 GCGCCGCAAATCAAA GTCGCCGCG ACTTATATG CGCGGCGGC ACCAGCAAGGGCGTA Shew185_4024 4805206 - 4806429 + | putative AcnD-accessory protein PrpF Shew185_4025 4806477 - 4807331 + | isocitrate lyase family protein TERM 5498 4807392 - 4807421 + F 70 -2.9 -5.0916 | overlap 4807407 AACAGTTCAACCAAA GACCTTGCT CCTCCCCCTTCC GGCAAGGTC TTTTTCTATTCGCCC TERM 5499 4807563 - 4807548 - f 79 -3.2 -5.46629 | overlap 4807562 AACACGGGAAAAAAA GCTCGT TATA ACCAGC ACAAAGACACTGAAA Shew185_4026 4807747 - 4812273 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 5500 4812333 - 4812346 + T 70 -8.1 -3.78775 | opp_overlap 4812333 ATAGCCAATAAAAAA GGCTC CTAG GAGCC TTTAATCATCACCAC TERM 5501 4812346 - 4812333 - T 93 -8.1 -5.49234 | opp_overlap 4812333 ATAGCCAATAAAAAA GGCTC CTAG GAGCC TTTAATCATCACCAC Shew185_4027 4813460 - 4812369 - | branched-chain amino acid aminotransferase Shew185_4029 4814014 - 4814286 + | transcriptional antiterminator, Rof TERM 5502 4814746 - 4814717 - T 79 -8.6 -4.09685 | opp_overlap 4814717 4814728, overlap 4814718 GTGTATTGCGGAAAA GCGTCACCGAGT CATGAC ACTCGGTGACAG GATTCTAAACTGGAC TERM 5503 4814745 - 4814718 - T 82 -12.1 -3.05597 | opp_overlap 4814717 4814728, overlap 4814717 TGTATTGCGGAAAAG CGTCACCGAGT CATGAC ACTCGGTGACA GGATTCTAAACTGGA Shew185_4031 4815132 - 4814779 - | endoribonuclease L-PSP Shew185_4032 4816706 - 4815213 - | Na+/H+ antiporter NhaC Shew185_4033 4816886 - 4817107 + | hypothetical protein Shew185_4034 4817316 - 4817104 - | hypothetical protein TERM 5504 4817162 - 4817183 + g 82 -5.1 -5.07486 | opp_overlap 4817162 TTCAATTCTAAAATA GCCTGCT TCACTTTT GGCAGGC TTTTTCTTGGCAGTA TERM 5505 4817526 - 4817483 - R 88 -3.8 -5.72207 | opp_overlap 4817522 TGCAAACCAAAAAAA CAAAGCGCCATAATAATGTC ACTT GCCAATTTTTTGACGCTCTG TTAAATTAGCAGCGT TERM 5506 4817576 - 4817602 + r 95 -4.5 -5.77853 | TCCTCTGGCTCAAGT CCGTACTTT CCGTTATAA GAAGTACGG TTTTTTTTGCCCATT TERM 5507 4817754 - 4817739 - R 100 -10.4 -5.4505 | opp_overlap 4817738 4817739 TGCCGCAACAAAAAA GGAGCC TTAA GGCTCC CTTTAAAACGCTGTA TERM 5508 4817739 - 4817754 + r 72 -10.4 -2.72829 | opp_overlap 4817739, overlap 4817738 TGCCGCAACAAAAAA GGAGCC TTAA GGCTCC CTTTAAAACGCTGTA Shew185_4035 4818431 - 4817823 - | DSBA oxidoreductase Shew185_4036 4819584 - 4818562 - | serine/threonine protein kinase Shew185_4037 4819919 - 4819587 - | hypothetical protein Shew185_4038 4821387 - 4819933 - | hypothetical protein TERM 5509 4820345 - 4820329 - G 76 -10.9 -3.14944 | opp_overlap 4820322 CATCAGCACAGTGAA TCGACCT ATG AGGTCGA GATCCTGTTTGTCCT TERM 5510 4821062 - 4821078 + g 71 -9.3 -3.53224 | opp_overlap 4821062 CCACGGCGCGAATAA GGCGTCG GAC CGCCGCC TTTAAGGGCGACATC TERM 5511 4821078 - 4821062 - G 74 -9.3 -3.62046 | opp_overlap 4821062 CCACGGCGCGAATAA GGCGTCG GAC CGCCGCC TTTAAGGGCGACATC Shew185_4039 4821708 - 4821397 - | hypothetical protein TERM 5512 4821751 - 4821736 - R 100 -9 -5.63504 | opp_overlap 4821735 4821736 AAGCCCATAAAAAAA GCGAAC CTTA GTTCGC CTTTTGCGCATTCAG Shew185_4040 4822689 - 4821853 - | hypothetical protein TERM 5513 4822829 - 4822851 + H 70 -3.5 -4.87273 | AAAGTCCATTGTGTC GGTGTAAAT CAAGT ATTTATGCC TTTTTATACGATCTT Shew185_4041 4822964 - 4823323 + | DsrE family protein Shew185_4042 4823469 - 4823867 + | hypothetical protein Shew185_4043 4823925 - 4824839 + | hypothetical protein Shew185_4044 4824992 - 4825576 + | hypothetical protein TERM 5514 4825604 - 4825625 + T 100 -13 -5.8187 | opp_overlap 4825604 AACGGTTAACTCAAA CGGCGAGC CTTAGT GCTCGCCG TTTTTTTGTTAGATC TERM 5515 4825625 - 4825604 - T 95 -13 -3.75897 | opp_overlap 4825604 AACGGTTAACTCAAA CGGCGAGC CTTAGT GCTCGCCG TTTTTTTGTTAGATC Shew185_4045 4826930 - 4825773 - | diguanylate cyclase TERM 5516 4826031 - 4826009 - G 81 -9.8 -4.07568 | overlap 4826010 CCGCTCTGGGTAAAA TGGCGGCGAA CTC TTCGCCACCG AAACGGCCAATAATG TERM 5517 4826030 - 4826010 - G 86 -13.3 -3.04398 | overlap 4826009 CGCTCTGGGTAAAAT GGCGGCGAA CTC TTCGCCACC GAAACGGCCAATAAT TERM 5518 4826425 - 4826415 - G 74 -4 -4.84311 | overlap 4826418 TTTTACATAACAAAA TAAG GCT CTTA CGATAAAGCCTATCC TERM 5519 4827058 - 4827029 - R 95 -14.5 -2.95126 | opp_overlap 4827031, overlap 4827026 GAGAATGTCAAAGCA TGCTTTCAGCAAA GGTT TCTGCTGAAAGCA AATCACAAATAAAAT Shew185_4046 4827742 - 4827101 - | hypothetical protein TERM 5520 4827824 - 4827771 - R 100 -13 -4.8048 | gap 3, opp_overlap 4827779 4827793, overlap 4827773 TTTTTAGATGAAAAA CACC-CTAACACTAGGGAATAAATTCA AAC TGAATTT-T-CCCTAGTGTTAGTGATG ATAAGCCAAGTGATT TERM 5521 4827821 - 4827773 - R 100 -13.6 -4.02302 | gap 2, opp_overlap 4827779 4827793, overlap 4827771 TTTAGATGAAAAACA CCCTAACACTAGGGAATAAATTCA AAC TGAATTT-T-CCCTAGTGTTAGTG ATGATAAGCCAAGTG TERM 5522 4827779 - 4827815 + r 73 -9.8 -3.23216 | gap 2, opp_overlap 4827773 4827771, overlap 4827793 TGAAAAACACCCTAA CACTAGGGAATAAATTCA AAC TGAATTT-T-CCCTAGTG TTAGTGATGATAAGC Shew185_4047 4828875 - 4827838 - | acyltransferase 3 TERM 5523 4827941 - 4827930 - G 73 -2.2 -5.1244 | TCAGGAAGATAAAAA TCCC CGCA GAGA AGAGCACGCTAGTGA TERM 5524 4828666 - 4828640 - G 76 -2.3 -5.20216 | opp_overlap 4828640 4828643 4828647 4828663, overlap 4828647 GACACGACTAAAAAA GGATAAAGTAC GTTCT GTACTTTGTTC TTCATGAACTTGCTG Shew185_4048 4830275 - 4828878 - | hypothetical protein TERM 5525 4830329 - 4830313 - R 73 -8 -3.79419 | overlap 4830311 GGGGTTTACAAAACA GCGCTA GCATA TAGCGC AATCAAGCAATAGTG Shew185_4049 4830819 - 4830469 - | hypothetical protein Shew185_4050 4831627 - 4830869 - | helix-turn-helix domain-containing protein TERM 5526 4831389 - 4831378 - G 72 -5.8 -4.36914 | CCGTGCTCGATAAAA TGCC TTGG GGCA AATCGTGGGGGAGTA Shew185_4051 4832191 - 4831652 - | PEBP family protein Shew185_4052 4832674 - 4832778 + | hypothetical protein TERM 5527 4833048 - 4833071 + F 72 -3.2 -5.02074 | ATTAATGTTTTTAAT TAGGTATAGG CACA CTTGTATCTA TTTTTTAAAAAGTAA TERM 5528 4834219 - 4834208 - g 77 -3 -5.33866 | CAAATCCATAAAAAA GATA AACA TATC AAAGGACAAGATAGA Shew185_4053 4833101 - 4835263 + | ornithine decarboxylase TERM 5529 4835311 - 4835264 - f 70 -5.9 -4.35958 | gap 1, opp_overlap 4835270 4835271, overlap 4835270 4835271 GTACTAAATAAATAA TGAAGACTGACTGCAGAG TTTATTAACCCCG CTCTGCAGTCAAT-TTCA TACTCCCTATAATAA TERM 5530 4835385 - 4835372 - g 76 -2.4 -5.22137 | opp_overlap 4835372 AATCAGAAAATAAAA TTGG CGTCGT CCAA TTAACTATTATCACC Shew185_4054 4835350 - 4836669 + | putrescine transporter Shew185_4055 4836788 - 4837942 + | porin TERM 5531 4838209 - 4838234 + T 91 -6.2 -5.50499 | ACCATTATCTCTACG CCACTCCA AGTCAGTTTC TGGAGTGG TTTTTTTCAATGTCG Shew185_4056 4838999 - 4838424 - | carbohydrate kinase TERM 5532 4839380 - 4839370 - g 76 -8.2 -4.05446 | opp_overlap 4839364 4839377 TTTGGTAACGACAAA GCCC ACT GGGC GATGACCTTTACTGG Shew185_4057 4839070 - 4840413 + | low affinity gluconate transporter Shew185_4058 4841465 - 4840467 - | periplasmic binding protein/LacI transcriptional regulator TERM 5533 4841820 - 4841849 + r 100 -17.9 -4.28971 | TGATCATGCTAGCTA GGCCGCTCCAAAC TTAT GTCTGGAGCGGCC TTTGTATATTATTGT Shew185_4059 4844339 - 4841880 - | hypothetical protein TERM 5534 4844135 - 4844123 - G 70 -7.7 -3.90744 | CGGGCTGGGAAATAA TACCG ACT CGGTA ACCTTGGGCCTCTAA Shew185_4060 4844966 - 4844556 - | hypothetical protein TERM 5535 4845940 - 4845952 + G 90 -9.1 -4.61199 | CGCTGGGCAATTTGG TCGGC GGT GCCGA TTTTATCTATGGCGT Shew185_4061 4845124 - 4846344 + | hypothetical protein Shew185_4062 4846536 - 4848182 + | hypothetical protein Shew185_4063 4848952 - 4848248 - | ThiJ/PfpI domain-containing protein TERM 5536 4849279 - 4849267 - g 70 -7.7 -3.90291 | ACGCTTTTAAGGAAA TGCTG AAA CAGCA AGATTATCGTGATAT Shew185_4064 4849191 - 4849802 + | TetR family transcriptional regulator Shew185_4065 4850095 - 4849841 - | hypothetical protein TERM 5537 4850054 - 4850068 + g 82 -5.6 -5.09895 | TTCCGTCAGCACTGT CAGCTG CAA CTGCTG TTTTTTAAGTAACTG Shew185_4066 4850598 - 4850107 - | putative orphan protein TERM 5538 4850255 - 4850230 - G 71 -2.6 -4.91657 | gap 1 AAGCAATAAAACAAA CTGT-AGCACC ACCAA AGCGCTCACAG TGGCTAATAACGAGC TERM 5539 4850512 - 4850537 + g 75 -11.9 -2.53382 | ATCAACCACCTTATT CTGGGCAGC GGATGCAG GCTGCCCAG TGAGTTCAGCATGCT Shew185_4067 4850931 - 4850608 - | hypothetical protein TERM 5540 4851280 - 4851254 - R 100 -17.4 -5.75538 | opp_overlap 4851254 GTTAAAAAACAAAAA GCCCGTTTGTCA TTA CGACAAACGGGC TTTTTATTGAATGAG TERM 5541 4851254 - 4851280 + r 100 -16.7 -5.10461 | opp_overlap 4851254 GTTAAAAAACAAAAA GCCCGTTTGTC ATTAC GACAAACGGGC TTTTTATTGAATGAG Shew185_4068 4852552 - 4851710 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 5542 4852088 - 4852075 - G 73 -2.3 -5.03314 | opp_overlap 4852075 GTGATTCGTAAAAAA TCAGC GTGC GCGGA TCTTCTTTCAGTGCC TERM 5543 4853845 - 4853832 - g 76 -9.5 -3.66018 | TCACCAGCCCAAGAA GCGGC CGAT GCCGC CGAGCACTTATATCA TERM 5544 4854540 - 4854505 - g 82 -11.9 -3.36581 | gap 1, overlap 4854523 4854525 4854526 TAAACCGCCAATTAA GCTGG-GGACGCTACC AAAGA GGCAGCTTCCGCCAGC TATGACACTCGGACA Shew185_4069 4852641 - 4854545 + | LppC family lipoprotein Shew185_4070 4854542 - 4854868 + | hypothetical protein Shew185_4071 4854978 - 4855571 + | phosphoheptose isomerase TERM 5545 4855777 - 4855757 - g 80 -4.7 -5.09173 | GAAGATCTTAAAAAA CAAACCAAT ATC ACTGGTGTG TCCGTCAATGGCAAT Shew185_4072 4855568 - 4856134 + | transport-associated Shew185_4073 4857113 - 4856229 - | hypothetical protein TERM 5546 4856904 - 4856876 - G 100 -9.6 -5.71638 | CAATAATTAAAAAAA GCGCGCCAAC TGAGCCTAT GTTGGCACGC CAAAGGTGAACTGAA Shew185_4074 4857234 - 4858106 + | LysR family transcriptional regulator TERM 5547 4858126 - 4858151 + T 71 -7.5 -3.92075 | opp_overlap 4858130, overlap 4858130 AACATACAGACACAA AAAAGCCGACG CTGA CGTCGGCTTAA TTTATCGATACCGAT TERM 5548 4858147 - 4858130 - T 100 -12.7 -5.4492 | opp_overlap 4858126 4858130 TACAGACACAAAAAA GCCGACG CTGA CGTCGGC TTAATTTATCGATAC TERM 5549 4858130 - 4858147 + T 90 -12.7 -3.61988 | opp_overlap 4858130, overlap 4858126 TACAGACACAAAAAA GCCGACG CTGA CGTCGGC TTAATTTATCGATAC Shew185_4075 4859168 - 4858170 - | tryptophanyl-tRNA synthetase Shew185_4076 4859917 - 4859240 - | phosphoglycolate phosphatase Shew185_4077 4860594 - 4859920 - | ribulose-phosphate 3-epimerase Shew185_4079 4861151 - 4861516 + | hypothetical protein Shew185_4080 4861516 - 4861701 + | hypothetical protein Shew185_4081 4862559 - 4861720 - | DNA adenine methylase Shew185_4082 4864059 - 4862608 - | sporulation domain-containing protein TERM 5550 4863238 - 4863216 - G 78 -11.4 -3.03007 | AATACGGCGTTAAGA CTTTTTGCCC GTA GGACAAAAAG ACGGGTGAATCTATC Shew185_4083 4865154 - 4864078 - | 3-dehydroquinate synthase TERM 5551 4865085 - 4865061 - G 72 -10.7 -2.71144 | TACGTTTTTTAAGCA GGTAGCGAGAC AAG GTCTCGCCATC ACTCATCAAATTCTG Shew185_4084 4865679 - 4865164 - | shikimate kinase I TERM 5552 4865322 - 4865349 + g 75 -11.4 -2.73012 | gap 1, overlap 4865321 4865319 CTTGCAATAATGGGC GTCGCTTGT-CTC TTT GAGTACGAGCGAC CTGTTTGTCGATAGT TERM 5553 4865445 - 4865460 + g 71 -4.7 -4.57073 | AACCACCACCGGTGG CAAGG ACGATA CCTTG TTTTTCAGACAAATC TERM 5554 4865876 - 4865850 - R 100 -14.6 -3.84271 | opp_overlap 4865854, overlap 4865854 GTATAACAGTAATAA TAAAGCCAGCAA TAA CTGCTGGCTTTA GTCGATACATAGCAA TERM 5555 4865872 - 4865854 - R 91 -11 -4.51224 | opp_overlap 4865854, overlap 4865850 AACAGTAATAATAAA GCCAGCAA TAA CTGCTGGC TTTAGTCGATACATA TERM 5556 4865854 - 4865872 + r 80 -10.3 -3.767 | opp_overlap 4865854 4865850 AACAGTAATAATAAA GCCAGCA ATAAC TGCTGGC TTTAGTCGATACATA Shew185_4085 4867947 - 4865896 - | type IV pilus secretin PilQ TERM 5557 4866132 - 4866149 + g 75 -7.7 -4.13945 | TGGCAACTGCGGGAC CCGTTGG AGTA TCAACGG TTTTACCCTGAGAAT Shew185_4086 4868484 - 4867969 - | pilus assembly protein PilP Shew185_4087 4869107 - 4868484 - | pilus assembly protein PilO Shew185_4088 4869688 - 4869104 - | fimbrial assembly family protein Shew185_4089 4870755 - 4869676 - | type IV pilus assembly protein PilM TERM 5558 4870998 - 4871021 + G 81 -6 -4.89567 | gap 1, overlap 4871017 CTAGCCCTTTTGGGA GTAGGC-GCCA TTG TGGCAGCATAC TTTTATGTTTTGCCG TERM 5559 4871390 - 4871364 - g 71 -8.9 -3.58522 | gap 1, opp_overlap 4871356 ACCATTATTCGTAAA GTGA-AGGAGAT TTTT ATCTCCTATCAC ATTGAAGAATTACTC TERM 5560 4871961 - 4871931 - g 73 -3.2 -4.84527 | TGGACAGATGAAAAA CCAGATCAAGCTCA AAT CAAGGCTGAACTGG CCAAGGTGGCTTCAA Shew185_4090 4870944 - 4873478 + | 1A family penicillin-binding protein TERM 5561 4873559 - 4873513 - T 100 -15.4 -3.39327 | opp_overlap 4873516 4873517 4873528, overlap 4873493 4873516 4873528 TGCCCATACGGATAA TGACCCAATAAAAAACGCGACT TAA AGTCGCGTTTTTTATTGGCTTG TTGATTTGAACAACT TERM 5562 4873516 - 4873556 + T 100 -21.5 -3.89354 | opp_overlap 4873513 4873516 4873528, overlap 4873517 4873528 CCATACGGATAATGA CCCAATAAAAAACGCGACT TAA AGTCGCGTTTTTTATTGGC TTGTTGATTTGAACA TERM 5563 4873556 - 4873516 - T 100 -21.5 -2.85712 | opp_overlap 4873516 4873517 4873528, overlap 4873513 4873528 CCATACGGATAATGA CCCAATAAAAAACGCGACT TAA AGTCGCGTTTTTTATTGGC TTGTTGATTTGAACA TERM 5564 4873517 - 4873555 + T 100 -25 -2.9313 | opp_overlap 4873516 4873513 4873528, overlap 4873516 4873528 CATACGGATAATGAC CCAATAAAAAACGCGACT TAA AGTCGCGTTTTTTATTGG CTTGTTGATTTGAAC TERM 5565 4873544 - 4873528 - T 100 -12.3 -5.4833 | opp_overlap 4873517 4873516 4873528, overlap 4873516 4873513 TGACCCAATAAAAAA CGCGACT TAA AGTCGCG TTTTTTATTGGCTTG TERM 5566 4873528 - 4873544 + T 100 -12.3 -5.5074 | opp_overlap 4873528 4873516 4873513, overlap 4873517 4873516 TGACCCAATAAAAAA CGCGACT TAA AGTCGCG TTTTTTATTGGCTTG Shew185_4091 4874946 - 4873579 - | argininosuccinate lyase TERM 5567 4875041 - 4875027 - R 100 -12.8 -5.72622 | opp_overlap 4875027 CCTAGAAACAAAAAA GGGCGC TAG GCGCCC TTTTAAACGACCTAT TERM 5568 4875027 - 4875041 + r 93 -12.8 -4.08394 | opp_overlap 4875027 CCTAGAAACAAAAAA GGGCGC TAG GCGCCC TTTTAAACGACCTAT Shew185_4092 4876294 - 4875056 - | argininosuccinate synthase TERM 5569 4875727 - 4875768 + g 72 -5.9 -4.3467 | gap 1 GGGAAATATGGAAAG CGTTGGCATCA-CGGCTATA GAT TTTAGTCGCTGACGCTGACG TTTTAATGTCACGCT Shew185_4093 4877260 - 4876355 - | ornithine carbamoyltransferase TERM 5570 4876735 - 4876715 - G 79 -9.7 -3.79747 | opp_overlap 4876715 GTAGCCATCAGGAAA GTGACCCGC TGG GCAGATCAC TGTCATGGTAGCACC Shew185_4094 4878055 - 4877273 - | acetylglutamate kinase Shew185_4095 4879067 - 4878087 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 5571 4880435 - 4880446 + G 75 -5.8 -4.60041 | ATTACCGATTGATAT CGCA CCAG TGCG TTTTTCAAGCTGGAT TERM 5572 4881806 - 4881791 - g 82 -10.4 -3.84514 | AGTGGAATTAGGAAA GCTGCC ACTC GGCAGC CGCCCAGCTAAACGT Shew185_4096 4879692 - 4882361 + | phosphoenolpyruvate carboxylase Shew185_4097 4882361 - 4882906 + | hypothetical protein TERM 5573 4882934 - 4882961 + T 75 -10 -3.25088 | opp_overlap 4882940, overlap 4882940 TGGTTCATCCGCCAT AAAAAATGCTCC CTCG GGAGCATTTTTG TTAATACGTTTAAAC TERM 5574 4882940 - 4882955 + T 90 -9 -5.14163 | opp_overlap 4882940, overlap 4882934 ATCCGCCATAAAAAA TGCTCC CTCG GGAGCA TTTTTGTTAATACGT TERM 5575 4882955 - 4882940 - T 93 -9 -5.24531 | opp_overlap 4882940 4882934 ATCCGCCATAAAAAA TGCTCC CTCG GGAGCA TTTTTGTTAATACGT Shew185_4098 4884306 - 4883032 - | competence/damage-inducible protein CinA TERM 5576 4884571 - 4884589 + r 77 -10.3 -3.39142 | opp_overlap 4884571 TCTAGACGCAAAAAA GCCAGCT TATTC AGCTGGC TTCGTTACATCTCAA TERM 5577 4884589 - 4884571 - R 93 -10.3 -5.1287 | opp_overlap 4884571 TCTAGACGCAAAAAA GCCAGCT TATTC AGCTGGC TTCGTTACATCTCAA TERM 5578 4884790 - 4884834 + r 100 -23.3 -3.71527 | opp_overlap 4884794 4884801, overlap 4884794 4884801 TTTTCGCGAAGCGTA TAAACACAAAAGCCCTAGC GGTTTAG GCTAGGGCTTTTGTGTTTA TTTGGATGCTTGGCG TERM 5579 4884830 - 4884794 - R 100 -19.7 -3.92522 | opp_overlap 4884790 4884794 4884801, overlap 4884801 CGCGAAGCGTATAAA CACAAAAGCCCTAGC GGTTTAG GCTAGGGCTTTTGTG TTTATTTGGATGCTT TERM 5580 4884794 - 4884830 + r 100 -19.7 -4.47786 | opp_overlap 4884794 4884801, overlap 4884790 4884801 CGCGAAGCGTATAAA CACAAAAGCCCTAGC GGTTTAG GCTAGGGCTTTTGTG TTTATTTGGATGCTT TERM 5581 4884801 - 4884823 + r 93 -10.6 -4.93454 | opp_overlap 4884801 4884794, overlap 4884794 4884790 CGTATAAACACAAAA GCCCTAGC GGTTTAG GCTAGGGC TTTTGTGTTTATTTG TERM 5582 4884823 - 4884801 - R 93 -10.6 -4.84918 | opp_overlap 4884794 4884790 4884801, overlap 4884794 CGTATAAACACAAAA GCCCTAGC GGTTTAG GCTAGGGC TTTTGTGTTTATTTG TERM 5583 4885007 - 4885018 + r 80 -2.2 -5.53288 | CACGTTAATAATAAT TCGG AAAG CTGA TTTTTTTGAGTTCGC TERM 5584 4886248 - 4886259 + r 72 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTGC TGTG TTTTTGATAAACAGT TERM 5585 4886765 - 4886781 + r 86 -9.4 -4.08546 | overlap 4886747 TTGGTCTTTCGGCGA GGGGGT TTTTC ACCCCC TTTATCGTTACTCAT TERM 5586 4887561 - 4887573 + r 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5587 4888079 - 4888049 - R 90 -13.4 -2.90194 | opp_overlap 4888067 4888071 4888072, overlap 4888052 4888058 AGTCGCTTAACCATA CAACCCAAATGAGT TTC ACTCACCTGGGTCG CATTGCGACCAGCTT TERM 5588 4888076 - 4888052 - R 88 -11.5 -3.59946 | opp_overlap 4888067 4888071 4888072, overlap 4888049 4888058 CGCTTAACCATACAA CCCAAATGAGT TTC ACTCACCTGGG TCGCATTGCGACCAG TERM 5589 4888143 - 4888170 + r 72 -4.3 -4.74706 | GGACGCGCCTTAGAC GTAAACTATTC AGCAAA GAATAATTTAC TTTTTGAATATTCAA TERM 5590 4890254 - 4890268 + r 73 -8.6 -3.71917 | CCAGTTGGCTAGGGC TGCGTA TTC TACGCA TTTCCCGTTTCGCGT Shew185_4099 4891831 - 4890926 - | DNA binding domain-containing protein Shew185_4100 4892791 - 4891901 - | formate dehydrogenase subunit FdhD TERM 5591 4892061 - 4892050 - G 72 -5.8 -4.35116 | opp_overlap 4892050 4892056 TACGTGATAGCAAAA TGGG GATC CCCA TCTTGGCGACTTTAA TERM 5592 4892376 - 4892400 + g 74 -2.7 -5.00884 | CTGCCATAAACCGTG CCTTGACCACA GCC TGACGTCACGG TTTTTTCAGAGAGCT TERM 5593 4892950 - 4892920 - H 70 -3.2 -4.87133 | opp_overlap 4892927 4892928 4892940 ATGTCCCAAACAAAA CCCAGCATTGGACA AAA TGTCCACTTTTGAG GGGGTTTTTGATGAT Shew185_4101 4893093 - 4893557 + | hypothetical protein TERM 5594 4894209 - 4894183 - g 77 -8.6 -4.14739 | opp_overlap 4894200, overlap 4894187 TGACCTACCCCAAAA TGCACCAGAGCC CTC GGCTCAGGCCCA AACCCGAGTTGTTTA TERM 5595 4894205 - 4894187 - g 71 -10.2 -2.75577 | opp_overlap 4894200, overlap 4894183 CTACCCCAAAATGCA CCAGAGCC CTC GGCTCAGG CCCAAACCCGAGTTG Shew185_4102 4893557 - 4894225 + | hypothetical protein TERM 5596 4894306 - 4894293 - f 76 -2.4 -5.47431 | CTAAGACATAAAAAA GCTT AGATAA AAGC AGAAAAGGCAATGAC Shew185_4103 4894415 - 4896076 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shew185_4104 4896087 - 4896764 + | cytoplasmic chaperone TorD family protein TERM 5597 4896800 - 4896780 - f 73 -8.3 -3.68936 | GACTAAGCTTAATAA TAGCGCG ACATGTG CGCGCTA GATGTCAATGCTAAA Shew185_4105 4896939 - 4897136 + | formate dehydrogenase region TAT target TERM 5598 4899911 - 4899880 - g 73 -5.2 -4.57341 | gap 1, opp_overlap 4899890 AAGCCTCGCGAAAAA CTATCCTG-AAGGCA CAG TGCCTTACGTGATAG GCGAATCGGCAAACA Shew185_4106 4897154 - 4900006 + | molybdopterin oxidoreductase TERM 5599 4900465 - 4900450 - g 82 -5.4 -5.0538 | opp_overlap 4900450 GCCGAGCGTAAAAAA TACGGC GCCA ACCGTA TTGCTGAGGGCAAGT Shew185_4107 4900033 - 4900629 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5600 4900667 - 4900635 - f 81 -11.4 -2.97613 | gap 1 GATTAACTAAGCAGA GCGAG-GGTTAGGGA GTCA TCCCTAACCTCTGGC AAGGAGTGAAAATGT TERM 5601 4900873 - 4900859 - g 71 -7 -4.07568 | TGGCGCGCGGTAAAA GCAGGC GAT GCCGGC TATACCACGGCTAAA Shew185_4108 4900679 - 4901707 + | formate dehydrogenase, gamma subunit TERM 5602 4901734 - 4901758 + F 100 -14.3 -4.386 | opp_overlap 4901737, overlap 4901737 GCTTTTAGGTCCTTA AAACACCCCGC CAT GCGGGGTGTTC TTTTATCAGCACTTC TERM 5603 4901755 - 4901737 - f 100 -16 -4.08767 | opp_overlap 4901734 4901737 TTTAGGTCCTTAAAA CACCCCGC CAT GCGGGGTG TTCTTTTATCAGCAC TERM 5604 4901737 - 4901755 + F 100 -16 -4.30995 | opp_overlap 4901737, overlap 4901734 TTTAGGTCCTTAAAA CACCCCGC CAT GCGGGGTG TTCTTTTATCAGCAC TERM 5605 4901854 - 4901821 - f 71 -3.9 -4.99035 | gap 1, overlap 4901822 4901823 TCAGTGATACAAAAA GCCGCCAACTCCCT GCTCCCA AGGGAGTTG-CGAA ACTATGAGCGAGTTA Shew185_4109 4902090 - 4902290 + | formate dehydrogenase region TAT target TERM 5606 4903274 - 4903253 - g 90 -8.1 -5.0538 | GCCGAGGCGAAAAAA TTTCCACCT AAAG AAGTGGAAA ACATCACAGGTGTGA TERM 5607 4904210 - 4904164 - g 80 -9.2 -4.26589 | overlap 4904157 4904187 ACTACACACCCAAAA CTGGGGCACCTTCAGCAACAAG ACG CTGGAAGCCGCAGGCGGCCCAG CGAAAGGCGAAACCT Shew185_4110 4902308 - 4905160 + | molybdopterin oxidoreductase TERM 5608 4905283 - 4905264 - g 77 -6.4 -4.57073 | CACTGCCTGTAAAAA CGAAAACG ACTC CGCTCTCG AGTGGGGGATCCAAC TERM 5609 4905388 - 4905408 + G 75 -10.5 -3.28712 | overlap 4905392 GATGCACCTTGTATG GCAGTTTGC CCA GCAAATTGC TTCTACAGAACCGAC TERM 5610 4905622 - 4905607 - g 81 -7.6 -4.61231 | opp_overlap 4905609, overlap 4905618 GCAGAGCGCCAAAAA TACGGT TCAA ACCGTA TTGCCGAAGGCAAAC Shew185_4111 4905190 - 4905759 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shew185_4112 4905839 - 4906822 + | formate dehydrogenase, gamma subunit TERM 5611 4906868 - 4906899 + F 75 -10.3 -3.16668 | opp_overlap 4906874, overlap 4906874 AACCGTCGGTTTAAC TAAAAACACCTCG CAGCGT CGAGGTGTTTTTC TTCATGCCAATATTG TERM 5612 4906874 - 4906893 + F 90 -9.3 -5.1356 | opp_overlap 4906874, overlap 4906868 CGGTTTAACTAAAAA CACCTCG CAGCGT CGAGGTG TTTTTCTTCATGCCA TERM 5613 4906893 - 4906874 - f 90 -9.3 -4.8622 | opp_overlap 4906874 4906868 CGGTTTAACTAAAAA CACCTCG CAGCGT CGAGGTG TTTTTCTTCATGCCA Shew185_4113 4907244 - 4908827 + | methyl-accepting chemotaxis sensory transducer TERM 5614 4908857 - 4908893 + F 83 -7.5 -4.66609 | gap 1, opp_overlap 4908857 AAAAAAGCTTTTAAA TCTG-CGGCCTAATAA CAAAAA TTATTGGGCTGTCAGA TTTTTAGATGAGATA TERM 5615 4910020 - 4910038 + G 71 -4.5 -4.65895 | overlap 4910018 4910022 ATTCCGAAGGTCTTG CCGCCAT GGATG ATGGCAG TTTTTGGGTCAGCGA Shew185_4114 4909314 - 4910855 + | hypothetical protein Shew185_4115 4910989 - 4911879 + | hypothetical protein TERM 5616 4912836 - 4912848 + G 71 -4.8 -4.58663 | opp_overlap 4912832 AAATGACTACAGCGG TGCG AAAGC CGCA TTTTTACAAGGTGCT Shew185_4116 4912138 - 4913529 + | Sel1 domain-containing protein Shew185_4117 4914510 - 4913599 - | bile acid:sodium symporter TERM 5617 4915196 - 4915216 + G 76 -9.7 -3.75535 | opp_overlap 4915195 4915194 AAAGAAATGGAAATG GTCAAAGCC CTC GGCTATGAC TTTGAATCTATGTAC Shew185_4118 4914890 - 4916227 + | coproporphyrinogen III oxidase TERM 5618 4916281 - 4916263 - f 79 -8.8 -4.04579 | opp_overlap 4916265, overlap 4916265 TTCATAAAGACTAAA CAGGCCCT TCG AGGGCCTT TTTGTTAACTTGGTT TERM 5619 4916265 - 4916279 + F 95 -11.4 -5.13741 | opp_overlap 4916265 4916263 CATAAAGACTAAACA GGCCCT TCG AGGGCC TTTTTGTTAACTTGG TERM 5620 4916279 - 4916265 - f 88 -11.4 -3.60737 | opp_overlap 4916265, overlap 4916263 CATAAAGACTAAACA GGCCCT TCG AGGGCC TTTTTGTTAACTTGG Shew185_4119 4916373 - 4916621 + | hypothetical protein TERM 5621 4916673 - 4916654 - T 93 -9.3 -5.2204 | opp_overlap 4916654 TACAACTAACAAAAA GCCAGAG TCAATG CTCTGGC TTTCGTTTAAATGTT TERM 5622 4916654 - 4916673 + T 86 -10 -4.10159 | opp_overlap 4916654 TACAACTAACAAAAA GCCAGAGT CAAT GCTCTGGC TTTCGTTTAAATGTT Shew185_4120 4918706 - 4916706 - | enterobactin receptor protein Shew185_4121 4918831 - 4919844 + | LysR family transcriptional regulator Shew185_4122 4919922 - 4920803 + | patatin Shew185_4123 4921728 - 4920787 - | LysR family transcriptional regulator TERM 5623 4921515 - 4921486 - G 79 -10.9 -3.53012 | gap 1 GTCGGGCCGCGTAAA TTGCGCCAATTGCT GTA AACA-TTGGCGCAA TTCAGGCGCGAGTGA Shew185_4124 4922614 - 4921757 - | hypothetical protein Shew185_4125 4923514 - 4922741 - | hypothetical protein TERM 5624 4923816 - 4923804 - g 85 -4.7 -5.47159 | TTTGAAGAGAAAAAA CTGCG CCG CGCGG GCTTAGACTATGCTG Shew185_4126 4923675 - 4924139 + | RNA methyltransferase Shew185_4127 4924742 - 4924194 - | hypothetical protein TERM 5625 4926580 - 4926557 - g 80 -6.7 -4.67608 | overlap 4926559 GATTGGAAGACAAAA CCCCTTGAG GATGTG CTCAAGGCG GCAGACTGGTTTAAA Shew185_4128 4925036 - 4927057 + | peptidase S9 prolyl oligopeptidase TERM 5626 4927097 - 4927081 - T 100 -12.3 -5.4492 | opp_overlap 4927081 CATAGATACAAAAAA GGTCTGC AAT GCAGACC TTTTTAATGGGCTAA TERM 5627 4927081 - 4927097 + T 100 -12.3 -4.7373 | opp_overlap 4927081 CATAGATACAAAAAA GGTCTGC AAT GCAGACC TTTTTAATGGGCTAA Shew185_4129 4928652 - 4927174 - | peptidase M16 domain-containing protein Shew185_4130 4929980 - 4928649 - | peptidase M16 domain-containing protein TERM 5628 4929700 - 4929726 + g 82 -5.1 -5.03145 | CCTGCGGCTTCCATA GTGCGGTCGAA CATTT TTGGGCCGTAC TTTTTTGAACCGTTA Shew185_4131 4931533 - 4930118 - | amidohydrolase Shew185_4132 4932940 - 4932095 - | hypothetical protein Shew185_4133 4933674 - 4933000 - | hypothetical protein TERM 5629 4933457 - 4933440 - G 73 -9.9 -3.29144 | opp_overlap 4933437 CTATTTTGTCGACAA GTTCGCA GAAG TGCGAAC GTATAAATTCTTCAG TERM 5630 4933698 - 4933735 + r 100 -14.4 -3.68836 | gap 1, opp_overlap 4933694 4933691, overlap 4933701 ACACCTAACATCTTA GC-ATTTATGCCCTGCG TCATT TGCAGGGCATAAATCGC TTGTTGACTAAATCT TERM 5631 4933701 - 4933731 + r 95 -14.9 -2.66602 | opp_overlap 4933694 4933691, overlap 4933698 CCTAACATCTTAGCA TTTATGCCCTGCG TCATT TGCAGGGCATAAA TCGCTTGTTGACTAA TERM 5632 4934137 - 4934159 + r 76 -7.6 -4.27062 | AGTCCTCCTTGGTCG GGTGTGGGGT GAA GCCCCACGAC TTTGATTTTGATTAA Shew185_4134 4935253 - 4934612 - | methyltransferase type 12 Shew185_4135 4935694 - 4935356 - | hypothetical protein TERM 5633 4935533 - 4935548 + g 77 -6.8 -4.5442 | gap 1 CTCTGCCGTCTCTTT GGC-CGC TTG GCGCGCC TTTTCTAATTGGGCC Shew185_4136 4936021 - 4938141 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Shew185_4137 4939025 - 4938402 - | DTW domain-containing protein TERM 5634 4939133 - 4939100 - R 100 -12.6 -5.56673 | AGGCACAATAAAAAA TACCCACAGTTCGC GGTCAA ACAAACTGTGGGTA AAGGGTGTGCTCTGT Shew185_4138 4940391 - 4939183 - | Bcr/CflA subfamily drug resistance transporter TERM 5635 4939743 - 4939728 - G 73 -4.6 -4.69326 | overlap 4939730 ACACGTAACACAAAA TCGCCG CCAT CGCCGA CATACAAGCAAAGGC Shew185_4139 4940505 - 4941476 + | LysR family transcriptional regulator Shew185_4140 4941630 - 4941791 + | hypothetical protein TERM 5636 4941781 - 4941812 + T 85 -11.6 -3.31144 | opp_overlap 4941783, overlap 4941783 TCACTATCAATAAAA AAGCCCGATAAAGC AAAG GCGTTATCGGGCTC TTATCAAAGTGAAGC TERM 5637 4941810 - 4941783 - T 100 -14.2 -5.52023 | opp_overlap 4941781 4941783 ACTATCAATAAAAAA GCCCGATAAAGC AAAG GCGTTATCGGGC TCTTATCAAAGTGAA TERM 5638 4941783 - 4941810 + T 95 -14.2 -3.22475 | opp_overlap 4941783, overlap 4941781 ACTATCAATAAAAAA GCCCGATAAAGC AAAG GCGTTATCGGGC TCTTATCAAAGTGAA Shew185_4141 4943713 - 4941842 - | methyl-accepting chemotaxis sensory transducer TERM 5639 4944201 - 4944211 + G 70 -2.4 -4.86731 | ATCGCTATTTTTATT GCCC TTC GTGC TTTTATTTGGCGCCA Shew185_4142 4944088 - 4944435 + | hypothetical protein Shew185_4143 4945995 - 4944520 - | Sel1 domain-containing protein TERM 5640 4944624 - 4944645 + g 93 -6.6 -5.46657 | gap 1, opp_overlap 4944624 CAAGAGAACGCCAAA GAGGCTCGA TAATC TCG-GCCTC TTTTTTATTGGCATG Shew185_4144 4946736 - 4946029 - | hypothetical protein TERM 5641 4947056 - 4947037 - g 73 -3.4 -4.87318 | GCCAAAACTGAAAAA GCGGCCAC GACG GCGACAGC AACTCAGTCAAATGA TERM 5642 4947197 - 4947187 - g 71 -6.8 -4.21462 | opp_overlap 4947186 4947190 ACCGACTATTCAAAA CTGG CTG CCAG CATTCCTAATGCCGA Shew185_4145 4946926 - 4947456 + | hypothetical protein TERM 5643 4947468 - 4947499 + F 81 -11.7 -2.71791 | overlap 4947467 GTAATCCCGTTTTAT CTCACCCTAAGCA ATACAG TGCTTAGGGTGAA CTTTCGCCCCCCAAT Shew185_4146 4947558 - 4948031 + | hypothetical protein TERM 5644 4948081 - 4948118 + T 100 -17.2 -2.9155 | opp_overlap 4948081, overlap 4948076 4948082 CCGCCGCATAAAAAA GCGTGAATGCGAAACG CTATCT CGTTTCACATTCACGC TATAGTCTTAAGACC TERM 5645 4948118 - 4948081 - T 100 -19.4 -5.24129 | opp_overlap 4948081 4948076 4948082 CCGCCGCATAAAAAA GCGTGAATGCGAAACG CTATCT CGTTTCACATTCACGC TATAGTCTTAAGACC Shew185_4147 4949141 - 4948317 - | putative signal transduction protein TERM 5646 4949200 - 4949186 - H 70 -5.6 -4.33674 | opp_overlap 4949192 4949193 AATATAGAACACAAA CTAGCG CCT CGCTCG CGAGATTTAATTAAA Shew185_4148 4949482 - 4950093 + | TonB family protein TERM 5647 4950159 - 4950123 - T 87 -6.1 -5.35222 | gap 2, opp_overlap 4950123 AAAACGCACAAAAAA GCCCTGCAATCTCTTTC GAATT AAAAGAG-TT-CAGGGC TTTTTGATTGAACTT TERM 5648 4950123 - 4950159 + T 79 -5.4 -4.87893 | gap 2, opp_overlap 4950123 AAAACGCACAAAAAA GCCCTGCAATCTCTTT CGAATTA AAAGAG-TT-CAGGGC TTTTTGATTGAACTT Shew185_4149 4951446 - 4950184 - | inner membrane protein YjeH TERM 5649 4951325 - 4951338 + g 75 -5.2 -4.78752 | ATCCATGCGACTAGC GCGC CAGATT GCGC TTTTTCAATTGTCAT Shew185_4150 4951699 - 4952130 + | AsnC family transcriptional regulator TERM 5650 4952186 - 4952161 - T 90 -9.8 -4.39696 | gap 1, opp_overlap 4952182, overlap 4952181 CCCTAAAGCAAGAAA CGCCACC-CTA AGGAA TAGAGGTGGCG AGGCCCATTTGGAGG Shew185_4151 4953351 - 4952410 - | polysulphide reductase NrfD Shew185_4152 4954034 - 4953348 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Shew185_4153 4954505 - 4954044 - | formate-dependent nitrite reductase TERM 5651 4954466 - 4954454 - G 71 -6.3 -4.25074 | CACCAAAGCTTAAAA GCAAT GCA ATTGC ACCCAAGCGAATCGA TERM 5652 4954579 - 4954543 - R 72 -10.2 -2.56539 | gap 1, overlap 4954542 4954545 4954564 GGGAAGGGAGAAGAG GAGTGTCAGGGTTCGGA TAAC TCCGAACCC-GACGGTC GGATCAGACGGCTAA Shew185_4154 4955059 - 4954583 - | hypothetical protein TERM 5653 4955258 - 4955283 + H 70 -9.2 -3.11222 | opp_overlap 4955275, overlap 4955257 TTGATAATCGCCAAT GTGAAATTCA ATTAAA TGAATTTCAC CTTTTAAAATTCCAA Shew185_4156 4955650 - 4956750 + | transposase IS4 family protein Shew185_4157 4957847 - 4959568 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase Shew185_4158 4959568 - 4960362 + | alpha/beta hydrolase fold Shew185_4159 4960390 - 4961490 + | O-succinylbenzoate synthase Shew185_4160 4961477 - 4962904 + | O-succinylbenzoate-CoA ligase TERM 5654 4962978 - 4962931 - T 100 -15.2 -3.78329 | opp_overlap 4962948, overlap 4962932 4962948 CGTCATCAAGCCAAA TTTCACCCATAAAAAAACCTGC CGTA GCAGGTTTTTTTATGGCTAAAT CACTGTCACCTTAAA TERM 5655 4962977 - 4962932 - T 100 -18.7 -2.86676 | opp_overlap 4962948, overlap 4962931 4962948 GTCATCAAGCCAAAT TTCACCCATAAAAAAACCTGC CGTA GCAGGTTTTTTTATGGCTAAA TCACTGTCACCTTAA TERM 5656 4962961 - 4962948 - T 100 -8.1 -5.64274 | opp_overlap 4962948, overlap 4962932 4962931 TCACCCATAAAAAAA CCTGC CGTA GCAGG TTTTTTTATGGCTAA TERM 5657 4962948 - 4962961 + T 100 -8.1 -5.64274 | opp_overlap 4962948 4962932 4962931 TCACCCATAAAAAAA CCTGC CGTA GCAGG TTTTTTTATGGCTAA Shew185_4161 4963862 - 4963005 - | RNA polymerase factor sigma-32 Shew185_4162 4965052 - 4964087 - | hypothetical protein Shew185_4163 4965762 - 4965049 - | cell division ATP-binding protein FtsE Shew185_4164 4967601 - 4965766 - | signal recognition particle-docking protein FtsY TERM 5658 4966856 - 4966866 + g 71 -8.2 -3.7282 | GCTGCCGCCAGTCGT GCCG CTT CGGC TTGTTGCTCGGCTAA TERM 5659 4967210 - 4967220 + g 76 -8.2 -4.05004 | GCTGCCGCCAGTCGT GCCG CTT CGGC TTGTTGTTCTGCTAA TERM 5660 4967330 - 4967340 + g 71 -8.2 -3.78778 | opp_overlap 4967315, overlap 4967323 GCAGCCGCCAGACGC GCCG CTT CGGC TTGTTGCTCTGCTAA Shew185_4165 4967815 - 4968483 + | putative methyltransferase Shew185_4166 4968458 - 4968742 + | hypothetical protein TERM 5661 4968804 - 4968789 - T 93 -10.4 -4.81551 | opp_overlap 4968789 CACGGACAGCAAAAA GCCCTC AACA GAGGGC TTTTTAATGACTAAC TERM 5662 4968789 - 4968804 + T 93 -10.4 -4.7497 | opp_overlap 4968789 CACGGACAGCAAAAA GCCCTC AACA GAGGGC TTTTTAATGACTAAC Shew185_4167 4969408 - 4968845 - | NapC/NirT cytochrome c domain-containing protein Shew185_4168 4969842 - 4970204 + | hypothetical protein Shew185_4169 4970305 - 4970760 + | hypothetical protein Shew185_4170 4970834 - 4971307 + | hypothetical protein Shew185_4171 4971576 - 4971836 + | hypothetical protein TERM 5663 4971903 - 4971884 - g 77 -2.8 -5.27399 | gap 1, overlap 4971885 4971887 TAATACAGTAAAAAA GCA-GGCCC CTA AGGCCGTAC TGATCTTGAGTAGCT TERM 5664 4972699 - 4972688 - g 71 -7.2 -4.06502 | CACCGCTAAAGCAAA CGGC CAAG GCCG CTACAAAGATTTGGT Shew185_4172 4971858 - 4973399 + | RND family efflux transporter MFP subunit TERM 5665 4974065 - 4974045 - g 71 -6.7 -4.15061 | CAAGCCATAGACAAA GCCAACAGC GAA GCCGGCGGC TCAGTGATCGAGATG TERM 5666 4974866 - 4974878 + G 77 -4.7 -4.91712 | TAAAACCTTCGCCAT GGCAG CGG CGGCC TTTTTATCCATTACC TERM 5667 4975220 - 4975201 - g 74 -6.3 -4.41047 | opp_overlap 4975201 4975206 ACCGTTTAATTAAAA CCGTGCC CGAAGT GGCCCGG GTGTTTGGCAAAGTA TERM 5668 4975555 - 4975542 - g 70 -8.1 -3.83026 | opp_overlap 4975543 GTGCCGCACACCAAA TCGGC CTAC GCCGA ACGCAGTGGCGGCGG TERM 5669 4976458 - 4976437 - g 74 -2.9 -5.16572 | gap 1, overlap 4976438 ATGTAATGCAAAAAA TCGCCGCACC TAT GGTA-GGCGG CATGGTCACAGCGCC Shew185_4173 4973409 - 4976558 + | CzcA family heavy metal efflux protein TERM 5670 4976610 - 4976582 - f 90 -8.9 -4.88736 | opp_overlap 4976582 GAGCACCCATAAAAA TCCCCTCAAGC TATTAAG GTTTGAGGGGA TTTTTCATTCAATTA TERM 5671 4976582 - 4976610 + F 100 -11.8 -4.90013 | opp_overlap 4976582 GAGCACCCATAAAAA TCCCCTCAAGCT ATTAA GGTTTGAGGGGA TTTTTCATTCAATTA TERM 5672 4977219 - 4977209 - g 80 -8.2 -4.38313 | ATATCAAAGCCAAAA GCCG AGA CGGC CTTAAAGAGCATGGC Shew185_4174 4976767 - 4977936 + | ribonuclease T2 TERM 5673 4977953 - 4977985 + T 93 -13.6 -3.12803 | opp_overlap 4977954 4977960, overlap 4977960 CAGATGGTTAGACAC ATAAAAACGGCGAC TAAGT GTCGCCGTTTTTAA TCTTAAATGTGACTC TERM 5674 4977984 - 4977954 - T 100 -17.1 -2.99649 | opp_overlap 4977953 4977960, overlap 4977960 AGATGGTTAGACACA TAAAAACGGCGAC TAAGT GTCGCCGTTTTTA ATCTTAAATGTGACT TERM 5675 4977978 - 4977960 - T 100 -11.7 -5.07275 | opp_overlap 4977953 4977960, overlap 4977954 TTAGACACATAAAAA CGGCGAC TAAGT GTCGCCG TTTTTAATCTTAAAT TERM 5676 4977960 - 4977978 + T 100 -11.7 -4.88228 | opp_overlap 4977960 4977954, overlap 4977953 TTAGACACATAAAAA CGGCGAC TAAGT GTCGCCG TTTTTAATCTTAAAT Shew185_4175 4978790 - 4978017 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 5677 4978125 - 4978139 + g 83 -6.4 -4.84359 | AATGCACACTTGCGC GCCTAA CGC TTGGGC TTTTTCTGCAAATGC TERM 5678 4978921 - 4978905 - R 100 -9.4 -5.56264 | opp_overlap 4978905 GCTAAATACAAAAAA GCCCTC ACGCA GAGGGC TTAAATCATCGAAAC TERM 5679 4978905 - 4978921 + r 72 -9.4 -3.09516 | opp_overlap 4978905 GCTAAATACAAAAAA GCCCTC ACGCA GAGGGC TTAAATCATCGAAAC Shew185_4176 4980196 - 4978940 - | aromatic amino acid transporter TERM 5680 4980123 - 4980072 - G 86 -13.2 -3.06483 | gap 3 TAGCCAAACCACATA CCGGCACCGACCAC-GG-GCAGAGA AAACA TCCCTGCACCTACGGTCG-TGCCGG CAATAATCATGGCGC Shew185_4177 4982619 - 4980196 - | glycerol-3-phosphate acyltransferase TERM 5681 4980926 - 4980936 + g 75 -3.2 -5.09225 | ACCGAAGTATAAGTA GTGT AAG GCAC TTTTTTGAGTAGGGT Shew185_4178 4982780 - 4983400 + | LexA repressor TERM 5682 4983638 - 4983617 - g 75 -5.7 -4.55295 | overlap 4983613 4983618 TTGGCTACAAACAAA TGCTCGCCA ACGC TGGCGTGCG TATGGACAGAGTCTT Shew185_4179 4983397 - 4983909 + | hypothetical protein TERM 5683 4983906 - 4983921 + F 72 -3.4 -5.15969 | overlap 4983892 TTTTAGCGCTGTGCA TTAAAT ATTC ATTTAA TTTTTTACCTTGAAA TERM 5684 4983940 - 4983961 + F 100 -6.5 -5.77853 | opp_overlap 4983937 TTTACCTTGAAAGCC GCCTCGCCT ATGA ATGTGAGGC TTTTTTTTGGCAATT TERM 5685 4985087 - 4985074 - g 83 -9.5 -4.21773 | opp_overlap 4985077, overlap 4985071 GCGGAACAGAAACAA GCCGC GGGC GCGGC GGCAGAAGCCGCTCA Shew185_4180 4984312 - 4985868 + | cytochrome c oxidase, subunit II TERM 5686 4987415 - 4987372 - g 83 -8.8 -4.56597 | opp_overlap 4987375 4987384 CGTGGCGGCGAAAAA GCCCCCGCTAAACCTTGGGA AGGT TCCGAGGGTTTAGAGTGGAC ATTGCCAAGCCCAGC Shew185_4181 4985878 - 4987470 + | cytochrome c oxidase subunit I type TERM 5687 4987921 - 4987934 + G 71 -3.1 -5.0065 | opp_overlap 4987895 4987900, overlap 4987895 GGCTTCGACAAGCGC TGAGT TGCC GCTCA TTTTCTTTGTGGATC Shew185_4182 4987472 - 4988053 + | cytochrome C oxidase assembly protein Shew185_4183 4988050 - 4988925 + | cytochrome c oxidase subunit III Shew185_4184 4989073 - 4988930 - | hypothetical protein TERM 5688 4989147 - 4989133 - H 75 -5.8 -4.76892 | opp_overlap 4989139 AGACCAATTTAAAAA TGAATA GGG TATTCA TGCAATATCCTTATG TERM 5689 4989768 - 4989809 + G 75 -8 -4.18018 | gap 1 CCTTGGCAACCCTTC CCACTGTCTGCGCAAAAAC ATTGG GGTTATGCGCTG-CAGTGG TTTTCGATGGCAGCC Shew185_4185 4989147 - 4989911 + | hypothetical protein Shew185_4186 4990003 - 4990548 + | hypothetical protein Shew185_4187 4990548 - 4991525 + | cytochrome oxidase assembly Shew185_4188 4991540 - 4992445 + | protoheme IX farnesyltransferase TERM 5690 4992782 - 4992798 + G 71 -2.9 -4.87665 | ATCTAAACAAAATTG CGCCATT GCA GGTGGTG TTTTTATCCGTCGAC Shew185_4189 4992493 - 4993125 + | electron transport protein SCO1/SenC Shew185_4190 4994172 - 4993126 - | polysaccharide deacetylase TERM 5691 4993376 - 4993393 + g 74 -9.1 -3.65351 | gap 1 GTGACTTTAAGCTCT GGGC-GCC AAT GGCCGCCC TTTAACTCAGGATCA TERM 5692 4994717 - 4994702 - g 71 -8.2 -3.78329 | opp_overlap 4994702 CGTCAGCAACCTAAA GCCGCC ATGT GGCAGC TGATATTAGCCAACC Shew185_4191 4994195 - 4995565 + | MATE efflux family protein TERM 5693 4995639 - 4995610 - T 75 -9.4 -3.3422 | opp_overlap 4995616, overlap 4995616 TATTTGGGTAAAAAC TAAAAACGCGAC TTTAAG GTCGCGTTTTTT ATTCAGCTCAACAAA TERM 5694 4995633 - 4995616 - T 93 -8.4 -5.18355 | opp_overlap 4995616, overlap 4995610 GGTAAAAACTAAAAA CGCGAC TTTAAG GTCGCG TTTTTTATTCAGCTC TERM 5695 4995616 - 4995633 + T 95 -9.1 -5.46657 | opp_overlap 4995616 4995610 GGTAAAAACTAAAAA CGCGACT TTAA GGTCGCG TTTTTTATTCAGCTC Shew185_4192 4996238 - 4995660 - | putative DNA uptake protein TERM 5696 4996454 - 4996437 - R 100 -12.7 -4.99043 | TCTTTACAAACAAAA GCGACCC AATT GGGTCGC TTAAGCTAGACATAA Shew185_4193 4998226 - 4996478 - | flavocytochrome c Shew185_4194 4999096 - 4998332 - | hypothetical protein Shew185_4195 5000538 - 4999291 - | histidine kinase A domain-containing protein TERM 5697 5000041 - 5000029 - G 81 -7.7 -4.52857 | ACTTTGCATATAAAA CGCAA GGC TTGCG CTTGCACAGAAGGTT TERM 5698 5000136 - 5000159 + g 76 -11.8 -2.78816 | opp_overlap 5000136, overlap 5000140 5000142 TGTACTGCAGCCAAA CATAGAGTGG CTGG CCACTCTGTG TGTAGTACACACTCA TERM 5699 5000159 - 5000136 - G 76 -9.6 -3.65902 | opp_overlap 5000136 5000140 5000142 TGTACTGCAGCCAAA CATAGAGTGG CTGG CCACTCTGTG TGTAGTACACACTCA Shew185_4196 5001202 - 5000525 - | two component transcriptional regulator TERM 5700 5000887 - 5000899 + g 71 -6.3 -4.28994 | GCGCGACGAGCTCCT CCATT GCA AATGG TTTTACTAAATAATC Shew185_4197 5001951 - 5001205 - | response regulator receiver protein TERM 5701 5001727 - 5001713 - G 91 -7.1 -5.30616 | TGATTTAAATAAAAA CGCTG TAATT CAGCG ACAACAGGGGAAGAA Shew185_4198 5002915 - 5002124 - | competence protein ComF TERM 5702 5003269 - 5003258 - g 77 -3 -5.28176 | opp_overlap 5003258 GTTATCCACAAAAAA TCAA AGGC TTGA TTACTATTGCCTCAT TERM 5703 5003604 - 5003573 - g 100 -16 -3.29043 | AACCTTGGCTTAGAA TTTGGGGACGACTC GATG GACTCGTCCCCAAA CGCGTACAACCTAAG Shew185_4199 5002948 - 5003742 + | bioH protein TERM 5704 5004099 - 5004083 - g 85 -5 -5.49569 | opp_overlap 5004085 CAGCAAGAGAAAAAA GCCCCC CTTGT GGTGGC CGAGCGGGTGTTACC Shew185_4200 5003804 - 5004361 + | hypothetical protein TERM 5705 5004440 - 5004421 - T 100 -12.2 -5.4182 | opp_overlap 5004421 5004436, overlap 5004436 AATGATAAACAAAAA TGCCGCTA AAAA TAGCGGCA TTTTTTATGCTGTTT TERM 5706 5004421 - 5004440 + T 100 -12.2 -5.38321 | opp_overlap 5004421 5004436, overlap 5004436 AATGATAAACAAAAA TGCCGCTA AAAA TAGCGGCA TTTTTTATGCTGTTT Shew185_4201 5006425 - 5004461 - | sulfatase TERM 5707 5004541 - 5004576 + g 79 -2.5 -5.3671 | gap 1, overlap 5004546 CTTTCTTCTCTAACG CTGCTGCAGCTGGCGC ATAAG GCGTTAACTGCT-CAG TTTTTTCGTTATATT TERM 5708 5004634 - 5004656 + g 71 -2.7 -4.98436 | GCAGGATCACTACAT CTTTACCTT CCATC AGGGCAAAG TTTTTATCGTATTGC Shew185_4202 5009006 - 5006643 - | RNA-binding S1 domain-containing protein Shew185_4203 5009673 - 5009170 - | transcription elongation factor GreB TERM 5709 5009733 - 5009706 - R 74 -4.2 -5.14965 | gap 1, overlap 5009708 ATGCTGAGCAAAAAA CAGCG-GCAATTT CAC AAAATGCACGCTA AAAATCACATACAAA Shew185_4204 5010689 - 5009757 - | response regulator receiver modulated diguanylate cyclase TERM 5710 5010241 - 5010219 - G 79 -11.3 -3.53343 | AAGTCGCTGCTCAAA CTGACGTCG ATTGG CGACGCCAG TTAAACTGTCAAGCA Shew185_4205 5015566 - 5010689 - | multi-sensor hybrid histidine kinase TERM 5711 5010894 - 5010910 + g 70 -2.2 -4.94222 | ACACTTTGCACCGAT GCCG AAGAATACA CGGC TTTTTCTACATTATT TERM 5712 5011519 - 5011506 - G 70 -2.3 -4.85599 | overlap 5011508 GGGAGTTCAGAAAAA CGTCC GTCA GCACG AATACGGCGAGTTGC TERM 5713 5015648 - 5015618 - H 86 -7.6 -5.1356 | overlap 5015619 TTGGACTAATAAAAA TTCTTTTGCCACTC AGC GAGTGGCAACAAAC GATAAATGCGCCAAA TERM 5714 5015647 - 5015619 - H 83 -11.1 -3.67413 | overlap 5015618 TGGACTAATAAAAAT TCTTTTGCCACTC AGC GAGTGGCAACAAA CGATAAATGCGCCAA TERM 5715 5016582 - 5016570 - g 71 -4.1 -4.74103 | opp_overlap 5016575 CGTTTAATCGAAAAA GATCC TGC GAATC CGCGTTACATTCAAA Shew185_4206 5015925 - 5016650 + | osmolarity response regulator TERM 5716 5016630 - 5016664 + F 80 -10.6 -3.29649 | TATGTGTTTGTGCCC GATGGCGCCGCGCGTC GAT GAGCCGCGCTGCCATC TTAATCTGCTGCGGT Shew185_4207 5016693 - 5018009 + | osmolarity sensor protein Shew185_4208 5018139 - 5020121 + | methyl-accepting chemotaxis sensory transducer TERM 5717 5020170 - 5020135 - T 81 -12 -2.8462 | opp_overlap 5020144 5020168, overlap 5020144 AACCCACTAAAATAC CAATAAAAATGGGAGC CTAA GCTCCCATTTATTTTG ATGTCCGATTACGTT TERM 5718 5020144 - 5020161 + T 95 -11.3 -4.75288 | opp_overlap 5020135 5020144 AAATACCAATAAAAA TGGGAGC CTAA GCTCCCA TTTATTTTGATGTCC TERM 5719 5020161 - 5020144 - T 100 -11.3 -5.20606 | opp_overlap 5020144, overlap 5020135 AAATACCAATAAAAA TGGGAGC CTAA GCTCCCA TTTATTTTGATGTCC Shew185_4209 5020672 - 5020199 - | redoxin domain-containing protein TERM 5720 5020789 - 5020747 - R 78 -2.5 -5.4492 | overlap 5020749 CACAGAGAGAAAAAA GGGTGATTAGCCGCGAGTG CGATT CATCCGCAGCCCAGCACAC AAACCGAGGAACAAC Shew185_4210 5021721 - 5020753 - | hypothetical protein TERM 5721 5021521 - 5021532 + g 85 -5.8 -5.03314 | CTCGGCTGCTTGCTC GCTG TTTT CAGC TTTTTTGGCAATGCC TERM 5722 5021654 - 5021632 - G 73 -5.5 -4.62336 | gap 1, opp_overlap 5021634, overlap 5021634 AGTGGACGCTAAAAA CAGCG-CGGC AATA GCCGTCGCTT TAACGAAATGGGTGT TERM 5723 5021652 - 5021634 - G 70 -8.1 -3.92746 | gap 1, opp_overlap 5021634, overlap 5021632 TGGACGCTAAAAACA GCG-CGGC AATA GCCGTCGC TTTAACGAAATGGGT Shew185_4211 5022080 - 5022370 + | peptidase TERM 5724 5022898 - 5022887 - g 72 -5.8 -4.37198 | AAGTGAAATCCAAAA CCGT ATTG ACGG AGCACATCTACGATC Shew185_4212 5022373 - 5023068 + | two component transcriptional regulator TERM 5725 5023104 - 5023129 + G 73 -7.5 -4.2338 | opp_overlap 5023106, overlap 5023102 5023106 TATTTAACTCCCTTA AAGCGCGCTTA GTGA TTAGCGCGCTA TTGTTTATCTTAGTG TERM 5726 5023127 - 5023106 - g 77 -10.1 -3.55622 | opp_overlap 5023104 5023102 5023106 TTTAACTCCCTTAAA GCGCGCTTA GTGA TTAGCGCGC TATTGTTTATCTTAG TERM 5727 5023106 - 5023127 + G 79 -10.1 -3.70022 | opp_overlap 5023106, overlap 5023104 5023102 TTTAACTCCCTTAAA GCGCGCTTA GTGA TTAGCGCGC TATTGTTTATCTTAG TERM 5728 5023870 - 5023857 - g 73 -8.1 -4.13014 | CCCACAGCCTCAAAA CACCG CTGG CGGTG ATCAAGAGTCAGGCC Shew185_4213 5023061 - 5024425 + | integral membrane sensor signal transduction histidine kinase TERM 5729 5024495 - 5024466 - f 100 -15.3 -3.61371 | opp_overlap 5024464 5024461 5024471 AAACCCCATCCTAAA TTGCGGTTAAAAA TAAC TTTTTAACCGCAA AATGCTTTCAGCTTA TERM 5730 5025691 - 5025660 - g 75 -3.7 -5.1675 | gap 1, opp_overlap 5025681, overlap 5025681 CGAGTTATCAAAAAA CGCAGGCCGA-GTT AAAAG AACGTCGATCCGCG ACTATGGTACAAACG Shew185_4214 5024573 - 5026075 + | hypothetical protein TERM 5731 5026127 - 5026096 - T 82 -11.6 -3.14564 | opp_overlap 5026098 5026102, overlap 5026098 5026102 CTATGGTCGCAGTAA CACAAAGAGCGCTG TTAA CTGCGCTCTTTGTT TTTAAATCAGTTGTT TERM 5732 5026098 - 5026125 + T 100 -14.2 -4.68424 | opp_overlap 5026096 5026098 5026102, overlap 5026102 ATGGTCGCAGTAACA CAAAGAGCGCTG TTAA CTGCGCTCTTTG TTTTTAAATCAGTTG TERM 5733 5026125 - 5026098 - T 95 -14.2 -3.13522 | opp_overlap 5026098 5026102, overlap 5026096 5026102 ATGGTCGCAGTAACA CAAAGAGCGCTG TTAA CTGCGCTCTTTG TTTTTAAATCAGTTG TERM 5734 5026102 - 5026121 + T 90 -9.2 -4.89063 | opp_overlap 5026098 5026096 5026102, overlap 5026098 TCGCAGTAACACAAA GAGCGCTG TTAA CTGCGCTC TTTGTTTTTAAATCA TERM 5735 5026121 - 5026102 - T 85 -9.2 -4.23674 | opp_overlap 5026102 5026098, overlap 5026098 5026096 TCGCAGTAACACAAA GAGCGCTG TTAA CTGCGCTC TTTGTTTTTAAATCA Shew185_4215 5026644 - 5026168 - | hypothetical protein TERM 5736 5026741 - 5026726 - R 70 -3.2 -4.93296 | CCAGCATTAGAAAAA CAGCAA CACT CTGCCG TTATAAATTACGCTG Shew185_4216 5030389 - 5026742 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) TERM 5737 5027564 - 5027597 + g 100 -9.6 -4.86621 | gap 1 ATAGTTATTACGCCC CGCCGATTTGGCGCG GTACA TG-GCCATATCGGCG TTTTTCATTAGGGCT TERM 5738 5030493 - 5030519 + H 70 -5.9 -4.31688 | opp_overlap 5030493 5030495, overlap 5030495 TTTATCTAATGTAAA TAGCGTAAATG ACTGA CATTTCCGCTG TTTTAACTTGATGTT TERM 5739 5030865 - 5030876 + H 71 -7.2 -3.93288 | TTAAGCCCTTTTACC GCGG GGAT CCGC TTTCATTCAATAGCC Shew185_4217 5031057 - 5031377 + | hypothetical protein Shew185_4218 5031565 - 5032650 + | ubiquinol oxidase, subunit II Shew185_4219 5032653 - 5034632 + | cytochrome o ubiquinol oxidase subunit I Shew185_4220 5034634 - 5035254 + | cytochrome o ubiquinol oxidase subunit III Shew185_4221 5035254 - 5035595 + | cytochrome o ubiquinol oxidase subunit IV TERM 5740 5035709 - 5035721 + G 81 -3.3 -5.4505 | overlap 5035695 TCGGGAATCTGATTT CCGTT GCT GGCGG TTTTTTATTAGCCGC TERM 5741 5036436 - 5036447 + G 71 -4.4 -4.68593 | overlap 5036425 GCAACGCTGGGCTCG CCAA GTGT TTGG TTTTTCAATCATCAC Shew185_4222 5035609 - 5036541 + | protoheme IX farnesyltransferase TERM 5742 5036595 - 5036614 + T 86 -7.9 -5.00642 | opp_overlap 5036590 5036595 GTTGATAATACAAAA GCGCTAA CCTAGA TTAGCGC TTTTTGTCTACCTTA TERM 5743 5036614 - 5036595 - T 88 -8.6 -4.73682 | opp_overlap 5036595, overlap 5036590 GTTGATAATACAAAA GCGCTAAC CTAG ATTAGCGC TTTTTGTCTACCTTA Shew185_4223 5037177 - 5036653 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Shew185_4224 5038087 - 5037203 - | DSBA oxidoreductase TERM 5744 5038103 - 5038132 + r 82 -8.7 -4.23213 | gap 1, overlap 5038104 5038105 AATCGATTTCCATTG T-TTCAGGTCAGGG GCT TCCTGACCTGAGTA TTTGTTGAGTGTCAC TERM 5745 5038104 - 5038130 + r 95 -13.8 -3.71378 | overlap 5038103 5038105 ATCGATTTCCATTGT TTCAGGTCAGGG GCT TCCTGACCTGAG TATTTGTTGAGTGTC TERM 5746 5038105 - 5038129 + r 95 -15.1 -2.82104 | overlap 5038104 5038103 TCGATTTCCATTGTT TCAGGTCAGGG GCT TCCTGACCTGA GTATTTGTTGAGTGT Shew185_4225 5040334 - 5038223 - | cytochrome c biogenesis protein transmembrane region TERM 5747 5038898 - 5038884 - G 73 -8.5 -3.96216 | GGTTTAGGGAAATAA CCCGC CACTT GCGGG AATGCCGCCACGATT TERM 5748 5039985 - 5040000 + g 73 -7.6 -3.96624 | overlap 5039975 GGAAAGGTGGTATTA CCTTTG TAAC CAAAGG TTTGTAATCCCAATA TERM 5749 5040192 - 5040230 + g 71 -9 -3.52652 | gap 1 GTTGCGGAATCAACT TCGCCCGTCAGCATAAA ACGTAC TTTG-GCTGGCGGGTGA TTATCGTTAACTAAC Shew185_4226 5041075 - 5040614 - | hypothetical protein TERM 5750 5040956 - 5040942 - G 70 -2.1 -4.84359 | opp_overlap 5040948 CCAGCTCCAGAAAAA GACGT AGCCG ACATC GCTTGCGCGCTCGGC Shew185_4227 5041988 - 5041239 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 5751 5042430 - 5042420 - g 76 -8.2 -4.01137 | TAGACAATGCACAAA GCCG ACT CGGC AGCGAACAGCAAATT Shew185_4228 5042173 - 5043093 + | LysR family transcriptional regulator TERM 5752 5043094 - 5043125 + T 72 -8.7 -3.57263 | opp_overlap 5043094 TTTAAGGCAGAATAA GTGAAAGGACTCG ACTGAG CGCGACCTTTCAC TTTGGGACTAACGGT TERM 5753 5043125 - 5043094 - T 77 -8.7 -3.84808 | opp_overlap 5043094 TTTAAGGCAGAATAA GTGAAAGGACTCG ACTGAG CGCGACCTTTCAC TTTGGGACTAACGGT Shew185_4229 5043787 - 5043140 - | chloramphenicol O-acetyltransferase Shew185_4230 5044853 - 5044110 - | hypothetical protein TERM 5754 5045021 - 5045002 - H 70 -7.9 -3.64198 | GTCCTATAGAGATAA GGCTCAA GTTTAG TTGAGCC AGTCAAAAACACAAA Shew185_4231 5045212 - 5045718 + | ECF subfamily RNA polymerase sigma-24 factor Shew185_4232 5045721 - 5046710 + | anti-FecI sigma factor, FecR Shew185_4233 5046812 - 5049211 + | TonB-dependent receptor Shew185_4234 5049214 - 5049576 + | hypothetical protein TERM 5755 5050715 - 5050728 + G 71 -3.8 -4.77173 | CAAATTTAAACACTG GCCA CTGCGC TGGC TTTATTTTATCGCAG Shew185_4235 5049573 - 5051252 + | PepSY-associated TM helix domain-containing protein Shew185_4236 5051273 - 5051641 + | hypothetical protein Shew185_4237 5051650 - 5052576 + | MotA/TolQ/ExbB proton channel Shew185_4238 5052560 - 5053030 + | biopolymer transport protein ExbD/TolR Shew185_4239 5053030 - 5053434 + | biopolymer transport protein ExbD/TolR TERM 5756 5053481 - 5053492 + G 75 -3.6 -5.03314 | overlap 5053463 5053480 ATGCGGTATAGCTTT GCTG TTAG CGGC TTTTTTGCACATCGC TERM 5757 5053678 - 5053662 - g 70 -2.2 -4.8622 | overlap 5053672 GTTGCTAAGCAAAAA TCTGAG CCAAT CGCAGA GCAACTCGATAAACC Shew185_4240 5053431 - 5054237 + | TonB family protein Shew185_4241 5055093 - 5054347 - | hypothetical protein TERM 5758 5057226 - 5057197 - g 71 -7.3 -3.99324 | opp_overlap 5057206 TCCCATTATTAGAAA TTGAAATCACTGA AACC TCAGTATTTTCAA CCCATAAAGAAACGG Shew185_4242 5055360 - 5057624 + | diguanylate cyclase/phosphodiesterase Shew185_4243 5057717 - 5058562 + | hypothetical protein TERM 5759 5058578 - 5058604 + T 82 -10.8 -3.53031 | opp_overlap 5058577 CCTTCTACTCAAATG GCGGCGATGATC TCA GGTTTTCGCCGC TTAATTTAAGCTAAC Shew185_4244 5059382 - 5058627 - | lytic transglycosylase catalytic Shew185_4245 5060419 - 5059382 - | hypothetical protein TERM 5760 5060460 - 5060435 - R 81 -11.9 -2.68612 | opp_overlap 5060454, overlap 5060432 5060453 ATTGATATCATAGTA TTGCAGGGTGA TAAC TCACCCTGCAC AGCTAAGCTTACAGG Shew185_4246 5061035 - 5060469 - | LemA family protein TERM 5761 5060948 - 5060961 + g 73 -4.5 -4.66609 | overlap 5060919 CCGACAGGGCCTCGA GTGCA GTAT TGCGC TTTTTGACTAGGCTG TERM 5762 5061341 - 5061359 + H 100 -8.9 -5.61596 | opp_overlap 5061340 TTTGCTCGTGAATAC TGGACTC CTCGA GAGTCCA TTTTTTTATCCCCAT TERM 5763 5061653 - 5061643 - g 80 -4.6 -5.0133 | TATTCCCCCAAAAAA GCCC TCT GAGC CAGATCCACAACATG Shew185_4247 5061608 - 5063230 + | AbgT putative transporter TERM 5764 5063239 - 5063272 + T 71 -7.4 -3.92522 | opp_overlap 5063243, overlap 5063243 GCCTTAGTCTCAATA AAAAGGGCGTCGAT GATGAA GTCGACGCCCTTGC TTTATCGGGTTGAAC TERM 5765 5063243 - 5063268 + T 90 -12.6 -3.61646 | opp_overlap 5063243, overlap 5063239 TAGTCTCAATAAAAA GGGCGTCGAT GATGAA GTCGACGCCC TTGCTTTATCGGGTT TERM 5766 5063268 - 5063243 - T 100 -11.9 -5.07486 | opp_overlap 5063243 5063239 TAGTCTCAATAAAAA GGGCGTCGA TGATGAAG TCGACGCCC TTGCTTTATCGGGTT Shew185_4248 5063628 - 5063305 - | hypothetical protein Shew185_4249 5063929 - 5063666 - | hypothetical protein TERM 5767 5064040 - 5064023 - R 100 -10.5 -5.38549 | opp_overlap 5064023 TTCAAATAACAAAAA GCCCCGC AATT GCAGGGC TTTAGTTTAGAAACG TERM 5768 5064023 - 5064040 + r 79 -8.3 -4.05788 | opp_overlap 5064023 TTCAAATAACAAAAA GCCCCGC AATT GCAGGGC TTTAGTTTAGAAACG Shew185_4250 5067197 - 5064063 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 5769 5066733 - 5066744 + g 71 -7.2 -4.03234 | CGCACCAACATAGTC GGCG ATAT CGCC TTTATCTAACGAACC Shew185_4251 5068352 - 5067207 - | RND family efflux transporter MFP subunit TERM 5770 5069683 - 5069663 - g 79 -9.7 -3.82097 | CTCAAAGTCAGCAAA CAGTTTGGC CGT GCCAACCTG CAATTAGAAGTCACG Shew185_4252 5069252 - 5069998 + | hypothetical protein TERM 5771 5070064 - 5070084 + T 100 -12.6 -5.47159 | GATAAATAGAGCCTT GACCAGCC CCCGC GGCTGGTC TTTTTTATGTTGCGC Shew185_4253 5070813 - 5070124 - | 3-methyladenine DNA glycosylase TERM 5772 5070321 - 5070310 - G 77 -4.4 -5.06816 | ATCGGTTAACAAAAA GGTA TCTT TACC AATGCCGCGCAGAAA Shew185_4254 5071021 - 5071668 + | glutathione S-transferase domain-containing protein TERM 5773 5071686 - 5071655 - T 70 -8.1 -3.6279 | AAACGGCGGGAATAA GAGGCATACCTTA GCGGGG TAAGTCATGCCTC AACAAGATCACATAT Shew185_4255 5072224 - 5071694 - | hypothetical protein TERM 5774 5072298 - 5072325 + r 79 -11.4 -2.73483 | opp_overlap 5072304, overlap 5072304 CGTGAATCAAATCAC AAAAAAGACGCC CTCA GGCGTCTTTTTA TCGTTCAACTAAGCT TERM 5775 5072319 - 5072304 - R 100 -10.4 -5.42265 | opp_overlap 5072298 5072304 TCAAATCACAAAAAA GACGCC CTCA GGCGTC TTTTTATCGTTCAAC TERM 5776 5072304 - 5072319 + r 93 -10.4 -4.98255 | opp_overlap 5072304, overlap 5072298 TCAAATCACAAAAAA GACGCC CTCA GGCGTC TTTTTATCGTTCAAC Shew185_4256 5074452 - 5072413 - | oligopeptidase A Shew185_4257 5074721 - 5075512 + | hypothetical protein TERM 5777 5076025 - 5075995 - g 76 -2.5 -5.27779 | gap 1, overlap 5075997 5075999 GCTAAGAGTAAAAAA CTCAGCCG-CAAGC AACA ACTTGCCAGCCGTG AACACGTAGCCAATG Shew185_4258 5075665 - 5076228 + | hypothetical protein TERM 5778 5076235 - 5076219 - f 75 -10.1 -3.06261 | CTCTAATTGCCAATA TCGCCGC TAG ACGGCGA CCCGATGAACAGCTG Shew185_4259 5076408 - 5077766 + | glutathione reductase TERM 5779 5077815 - 5077851 + F 70 -8.1 -3.61988 | opp_overlap 5077815 5077812 TGGAAAAACAATCTA CACCACCTACACT TTTATATAATC AGTGAAGGTGGTG TTACTTTCTAGGTGG TERM 5780 5078306 - 5078294 - g 71 -6.3 -4.29981 | overlap 5078302 GAAAGATATTTAAAA GTTCA GAA TGAAC AGGAAGCGCCGTTCA Shew185_4260 5077871 - 5079196 + | phage integrase family protein Shew185_4261 5079189 - 5080943 + | hypothetical protein Shew185_4262 5080948 - 5082999 + | hypothetical protein Shew185_4263 5082996 - 5083454 + | hypothetical protein TERM 5781 5083619 - 5083601 - T 76 -8.9 -3.64703 | TTTTTTGTACGCAAA CCAGACT AGGCA AGTCTGG TCCACTAGCTCACTT TERM 5782 5084714 - 5084674 - T 90 -8.4 -4.85599 | gap 1, opp_overlap 5084674 5084675, overlap 5084675 CTCACCGCACAAAAA GGCCCTTCTAACACAGTGA GTTA TCAC-ATGATAGAAGGGCG TTGTATTGGCATCAA TERM 5783 5084713 - 5084675 - T 89 -11.9 -3.50877 | gap 1, opp_overlap 5084674 5084675, overlap 5084674 TCACCGCACAAAAAG GCCCTTCTAACACAGTGA GTTA TCAC-ATGATAGAAGGGC GTTGTATTGGCATCA TERM 5784 5084675 - 5084713 + T 71 -9.7 -2.80245 | gap 1, opp_overlap 5084675 5084674, overlap 5084674 TCACCGCACAAAAAG GCCCTTCTAACACAGTGA GTTA TCACA-TGATAGAAGGGC GTTGTATTGGCATCA Shew185_4265 5085268 - 5084852 - | hypothetical protein TERM 5785 5084978 - 5084990 + g 73 -3.4 -4.84761 | opp_overlap 5084978 ATCACTTTTTTTAAA CTCT TCACC AGAG TTTTTATGAAAATAT Shew185_4266 5086189 - 5085293 - | hypothetical protein TERM 5786 5085434 - 5085467 + g 100 -15.3 -3.38072 | overlap 5085435 ATTGGCTGTTCCCCC ATCCGCTGCATGTGC GACA GCACCTGCAGCGGAA TTACTATTAACTGAG TERM 5787 5085435 - 5085466 + g 100 -18.8 -2.62522 | overlap 5085434 TTGGCTGTTCCCCCA TCCGCTGCATGTGC GACA GCACCTGCAGCGGA ATTACTATTAACTGA Shew185_4267 5090919 - 5086231 - | YD repeat-containing protein TERM 5788 5090655 - 5090669 + g 90 -7.8 -5.1244 | AAAGCTCAGTTGTTT CAGGGG TCA CCTCTG TTTTTATATTCATCC TERM 5789 5091317 - 5091305 - R 73 -7.7 -3.96148 | TCGTCTTAGCACAAA CCTCA TTG TGAGG GAGATTCATCCCCAA Shew185_4268 5092869 - 5091613 - | DNA-directed DNA polymerase Shew185_4269 5093276 - 5092869 - | putative prophage repressor TERM 5790 5092994 - 5093004 + g 78 -5.4 -4.84017 | opp_overlap 5092991 5092994 CATTCGACGACAGCA GCAT GCG ATGC TTTTTATCGAGGATT Shew185_4270 5093741 - 5093869 + | hypothetical protein Shew185_4271 5094185 - 5093979 - | XRE family transcriptional regulator Shew185_4272 5094317 - 5094859 + | hypothetical protein TERM 5791 5096260 - 5096250 - g 78 -5.4 -4.96848 | opp_overlap 5096250 GGTTTTAGAGAAAAA GTTG TCT CAAC TTTTGACTCACCGTT Shew185_4273 5094864 - 5096279 + | type III restriction protein res subunit TERM 5792 5096325 - 5096359 + T 73 -10.3 -2.75382 | overlap 5096322 TTCTCGACACTTTGA TTTTTAGTTTCATGG TAGTT CCATAAAACTAAAAA TGATTGGATACACTA Shew185_4274 5097729 - 5096570 - | transposase IS3/IS911 family protein Shew185_4275 5100247 - 5097767 - | hypothetical protein TERM 5793 5098573 - 5098587 + g 70 -7.8 -3.8186 | opp_overlap 5098573 CAAATTTACCCGAAA GTGCGG TTG CTGCAC TTGTTGCTTCAAATG Shew185_4276 5101240 - 5100257 - | ATPase central domain-containing protein Shew185_4278 5104448 - 5103289 - | transposase IS3/IS911 family protein Shew185_4279 5104920 - 5106590 + | UvrD/REP helicase TERM 5794 5106931 - 5106904 - f 100 -14.2 -3.41602 | opp_overlap 5106905, overlap 5106905 TTGATTTCATCATAA TTTAGGGCCAGC TAAT GCTGGCCCTAAT TGATCGCAGATAGCA TERM 5795 5106905 - 5106930 + F 100 -17.7 -3.14931 | opp_overlap 5106905 5106904 TGATTTCATCATAAT TTAGGGCCAGC TAAT GCTGGCCCTAA TTGATCGCAGATAGC TERM 5796 5106930 - 5106905 - f 100 -17.7 -2.64747 | opp_overlap 5106905, overlap 5106904 TGATTTCATCATAAT TTAGGGCCAGC TAAT GCTGGCCCTAA TTGATCGCAGATAGC Shew185_4280 5107057 - 5107257 + | hypothetical protein Shew185_4281 5107264 - 5108127 + | secretion protein HlyD family protein Shew185_4282 5108133 - 5110268 + | fusaric acid resistance protein region TERM 5797 5110310 - 5110331 + F 70 -8.9 -3.25491 | opp_overlap 5110312 5110314 GATAAAATGCCTTAA TATAGTTAG ATCA CTAACTATA TTGGTGATATAAATT Shew185_4283 5110550 - 5112046 + | sodium/proline symporter TERM 5798 5112650 - 5112686 + G 75 -11.4 -2.62616 | ATGCCGAGATCTACG CCATGGCAGGCGGCGC CAGCA GCGCCGTCGGCACTGG TGGTATGCGGACTAA TERM 5799 5112856 - 5112831 - g 77 -8.3 -4.2558 | overlap 5112832 TACCCCCGATGAAAA GCCAATGCAAG ATCA CTTGCACTGGA TGACACATACCTCGC TERM 5800 5112855 - 5112832 - g 79 -11.8 -3.15027 | overlap 5112831 ACCCCCGATGAAAAG CCAATGCAAG ATCA CTTGCACTGG ATGACACATACCTCG Shew185_4284 5112058 - 5113158 + | gamma-glutamyl kinase Shew185_4285 5113207 - 5114454 + | gamma-glutamyl phosphate reductase TERM 5801 5114525 - 5114550 + F 100 -19.1 -5.10461 | opp_overlap 5114525 ATTGTAAAGATTAAA GGCCACAGTCG GTAA CGACTGTGGCC TTTTTGTTGGCTAAA TERM 5802 5114550 - 5114525 - f 100 -19.1 -4.00934 | opp_overlap 5114525 ATTGTAAAGATTAAA GGCCACAGTCG GTAA CGACTGTGGCC TTTTTGTTGGCTAAA Shew185_4286 5114857 - 5117043 + | TonB-dependent siderophore receptor Shew185_4287 5117084 - 5117725 + | putative secreted protein TERM 5803 5117934 - 5117973 + G 71 -8.4 -3.73775 | opp_overlap 5117933 5117934, overlap 5117935 GCCTAGTCGCCAAAG TGCTGGTCGATGCGGGCT CGCA AGTCCGCGCAGGCCAGCC TTTACTCGCACTCGA TERM 5804 5117935 - 5117972 + G 76 -11.9 -2.84051 | opp_overlap 5117933 5117934, overlap 5117934 CCTAGTCGCCAAAGT GCTGGTCGATGCGGGCT CGCA AGTCCGCGCAGGCCAGC CTTTACTCGCACTCG Shew185_4288 5117753 - 5118802 + | RND family efflux transporter MFP subunit TERM 5805 5119003 - 5118988 - g 73 -3.2 -4.86385 | overlap 5118990 ACGTCGAAAAAGAAA TTCTGC TTGA GCAGGA ACGCTACCTGCGCAC TERM 5806 5120972 - 5120986 + G 71 -7.2 -4.07568 | CCCTCGCTGGCAACG TCTTGT AGA ACAAGA TTTTAGCGGCAGCGA Shew185_4289 5118807 - 5121974 + | acriflavin resistance protein Shew185_4290 5121967 - 5122335 + | hypothetical protein Shew185_4291 5122332 - 5123921 + | PepSY-associated TM helix domain-containing protein Shew185_4292 5123918 - 5124244 + | hypothetical protein TERM 5807 5124417 - 5124429 + T 86 -7.7 -4.96848 | opp_overlap 5124416 ATAAACCGAAAGTAC CCAAG CAA CTTGG TTTTTATATAAAAAA Shew185_4293 5124805 - 5124398 - | SH3 type 3 domain-containing protein TERM 5808 5124465 - 5124446 - G 88 -2 -5.71712 | overlap 5124448 TTTTATATAAAAAAA CTTCCAGT CACC ACTGGTGG TAATAACTTCAATAC TERM 5809 5125100 - 5125122 + r 83 -9.8 -3.91144 | AGTCCTCCTTGGTCG GGTGTGGGGT GAA ACCCCACGAC TTTCTCGGCTGTAAG Shew185_4294 5126702 - 5125170 - | XRE family transcriptional regulator TERM 5810 5126394 - 5126382 - G 81 -3.3 -5.46706 | ATTGGAAAACAAAAA GCTGG GTT CGAGC GCCATACCGCTTATG TERM 5811 5126630 - 5126650 + g 74 -3.9 -4.87665 | overlap 5126638 CCATGGTTAAATTAT TACGTTTCC GTA GGTTACGTA TTTTTGTGCCTAGGA Shew185_4295 5126955 - 5127518 + | malate synthase TERM 5812 5127553 - 5127590 + F 95 -12.9 -3.60475 | opp_overlap 5127558 5127561, overlap 5127554 5127558 5127561 GCCATTTATAATCCA GCTAAGAAGATGAACTG AGCA CAGTTCATCTTCTTCGA TTTACCCTCCAACTT TERM 5813 5127554 - 5127589 + F 100 -16.4 -2.75963 | opp_overlap 5127558 5127561, overlap 5127553 5127558 5127561 CCATTTATAATCCAG CTAAGAAGATGAACTG AGCA CAGTTCATCTTCTTCG ATTTACCCTCCAACT TERM 5814 5127558 - 5127585 + F 100 -15.8 -3.28497 | opp_overlap 5127558 5127561, overlap 5127554 5127553 5127561 TTATAATCCAGCTAA GAAGATGAACTG AGCA CAGTTCATCTTC TTCGATTTACCCTCC TERM 5815 5127585 - 5127558 - f 100 -15.8 -3.10905 | opp_overlap 5127558 5127554 5127553 5127561, overlap 5127561 TTATAATCCAGCTAA GAAGATGAACTG AGCA CAGTTCATCTTC TTCGATTTACCCTCC TERM 5816 5127561 - 5127582 + F 89 -11.7 -3.77832 | opp_overlap 5127558 5127561, overlap 5127558 5127554 5127553 TAATCCAGCTAAGAA GATGAACTG AGCA CAGTTCATC TTCTTCGATTTACCC TERM 5817 5127582 - 5127561 - f 89 -11.7 -3.69283 | opp_overlap 5127561 5127558 5127554 5127553, overlap 5127558 TAATCCAGCTAAGAA GATGAACTG AGCA CAGTTCATC TTCTTCGATTTACCC Shew185_4296 5127808 - 5128758 + | hypothetical protein Shew185_4297 5128934 - 5128782 - | hypothetical protein Shew185_4298 5129587 - 5129042 - | response regulator receiver protein TERM 5818 5129347 - 5129361 + g 88 -8.6 -4.77567 | CAGAGCGCATTTGCG TCGACA TAT TGTCGA TTTTCTTATCCGCAT TERM 5819 5130721 - 5130703 - g 78 -6 -4.67755 | overlap 5130704 ATATCGAGCTAAAAA CCCAGCTT AAA AAGCTAGA GCAACAGCAACAAAA Shew185_4299 5129733 - 5130956 + | hypothetical protein Shew185_4300 5130953 - 5131981 + | hypothetical protein TERM 5820 5134615 - 5134634 + G 73 -10 -3.44146 | opp_overlap 5134611 TATTCACGACATTTG GCTCGCTT GCCA AAGCGGGC TTAATTCTCGCCAAC Shew185_4301 5131983 - 5135036 + | CzcA family heavy metal efflux protein Shew185_4302 5135033 - 5135338 + | hypothetical protein TERM 5821 5135360 - 5135392 + T 95 -13.6 -3.33492 | gap 1, opp_overlap 5135357 GCGCGGTTAAATCTC GGCAT-CCGGCCTTA TAGC TAAGGTCGGGATGCC TTATAAAATAGCTAC Shew185_4303 5136039 - 5135404 - | paraquat-inducible protein A TERM 5822 5136028 - 5136009 - G 73 -2.2 -5.02439 | overlap 5136012 AGAGAATGATAAAAA TAGGAAAT AGAG ATTTCATA GCACTGTTCATCGCA Shew185_4304 5137342 - 5136152 - | metal dependent phosphohydrolase TERM 5823 5136618 - 5136642 + g 73 -7.9 -3.98716 | overlap 5136619 ATCAAGCAGATATCT TTACTGATCTG CGA CAGACCAGTAG TTTCGTTCATAATTT TERM 5824 5137609 - 5137593 - R 76 -7.3 -4.1552 | CACTTTTTCAATAAA TGCCTAA GGG CTAGGCA TTCAAAACTGGCGAC Shew185_4305 5137816 - 5137577 - | hypothetical protein Shew185_4306 5138592 - 5137855 - | hypothetical protein Shew185_4307 5139164 - 5138622 - | hypothetical protein Shew185_4308 5139837 - 5139157 - | cobalt transport protein Shew185_4309 5141197 - 5139827 - | ABC transporter related TERM 5825 5140955 - 5140923 - G 71 -8.5 -3.66178 | opp_overlap 5140923 TTTTCTAAGGCGAAA GCCACTTCGGC GCCAACGGTTT GCCGAAGTAGC TGAGTTTGCGGGTCC Shew185_4310 5143412 - 5141199 - | TonB-dependent receptor plug TERM 5826 5141234 - 5141252 + g 82 -12.4 -3.14944 | CGATGAAGATCTGTC GTCCTGCC TGC GGCAGGGC TTCACTCTGGTAGTA Shew185_4311 5143838 - 5145196 + | isochorismate synthase Shew185_4312 5145949 - 5145209 - | hypothetical protein TERM 5827 5146199 - 5146183 - g 78 -11.5 -2.92246 | opp_overlap 5146183 5146182 TTAATGTTAACCACA GCGCAGC TTC GCCGCGC CTTATTCCTATTAGT TERM 5828 5146691 - 5146715 + G 77 -8.5 -4.15833 | opp_overlap 5146697 TGGCGGCCAATTGGC CCGAAATCGCC ACT GTCGATTACGG TTTTAAGCTGATCGT Shew185_4313 5146165 - 5146824 + | hypothetical protein TERM 5829 5146870 - 5146905 + F 100 -10.4 -5.24129 | TGACCAGTTAATAGT TCAGCCCTGCTCCTGT TAAC GCGCGAGTGGGGCTGA TTTTTTATGAGAGCA Shew185_4314 5146925 - 5147383 + | GCN5-related N-acetyltransferase TERM 5830 5147581 - 5147599 + T 100 -10.3 -5.81412 | CACACACTCTTTGTG GCCGGAT TCATC ATCCGGC TTTTTTTTGCCTAAA Shew185_4315 5149886 - 5147733 - | integral membrane sensor signal transduction histidine kinase TERM 5831 5149094 - 5149083 - G 72 -5.8 -4.36914 | opp_overlap 5149082 GCCCGTGGGATAAAA GTGC AGTG GCAC GTTAGTGGAAATACG Shew185_4316 5151270 - 5149888 - | two component, sigma54 specific, Fis family transcriptional regulator Shew185_4317 5151555 - 5152379 + | extracellular solute-binding protein TERM 5832 5152403 - 5152423 + G 100 -12.6 -4.86731 | opp_overlap 5152405 TGGCTAGCACTATTA CAGCAGGC GTTAA GCCTGCTG TTTTCTTTAGACCCC Shew185_4318 5152376 - 5153083 + | binding-protein-dependent transport systems inner membrane component Shew185_4319 5153087 - 5153797 + | ABC transporter related TERM 5833 5153919 - 5153907 - g 74 -4.1 -4.88495 | overlap 5153909 ATAGACAGAATAAAA CCTCA GGT TAAGG AGATCCTGATCAACG Shew185_4320 5153781 - 5154371 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 5834 5155033 - 5155016 - g 85 -5.5 -5.19328 | AGGCGACAACAAAAA CCTCAGC GTCA GCCAAGG TTTAGCGCAAATTTT Shew185_4321 5154405 - 5156216 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 5835 5156380 - 5156396 + G 73 -8 -4.09739 | opp_overlap 5156380 5156377 CACCTCGAAGAATTA GCTTGG ATTGC CCAAGC TTTTACCGAGCTTGG Shew185_4322 5156233 - 5157216 + | molybdenum cofactor biosynthesis protein A Shew185_4323 5157307 - 5157762 + | hypothetical protein Shew185_4324 5157798 - 5158613 + | formamidopyrimidine-DNA glycosylase TERM 5836 5158635 - 5158662 + T 93 -11.4 -4.24283 | opp_overlap 5158640, overlap 5158640 CTCGCTAATCGCCGT AAAAATGCCTGC AATT GCAGGCATTTTA TTCTTTATATTGGTT TERM 5837 5158657 - 5158640 - T 93 -11.3 -4.58283 | opp_overlap 5158635 5158640 TAATCGCCGTAAAAA TGCCTGC AATT GCAGGCA TTTTATTCTTTATAT TERM 5838 5158640 - 5158657 + T 95 -11.3 -5.06472 | opp_overlap 5158640, overlap 5158635 TAATCGCCGTAAAAA TGCCTGC AATT GCAGGCA TTTTATTCTTTATAT Shew185_4325 5160400 - 5158676 - | glycosyl transferase family protein Shew185_4326 5161075 - 5160410 - | SNARE associated Golgi protein TERM 5839 5160673 - 5160654 - G 81 -10.8 -3.73402 | AGATTGGTGAGTAAA TTACTGCC GACG GGCAGTAA GCGTATCATCAGCAC Shew185_4327 5161808 - 5161077 - | glycosyl transferase family protein Shew185_4328 5162043 - 5163206 + | UDP-glucose/GDP-mannose dehydrogenase Shew185_4329 5163230 - 5164237 + | NAD-dependent epimerase/dehydratase TERM 5840 5164264 - 5164283 + T 100 -13.6 -4.11623 | opp_overlap 5164264 AAAGACAAACAAAAA GGCCTGCA AGAA TGCAGGCC TTTGCTTTAATCATG TERM 5841 5164283 - 5164264 - T 100 -13.6 -5.48623 | opp_overlap 5164264 AAAGACAAACAAAAA GGCCTGCA AGAA TGCAGGCC TTTGCTTTAATCATG Shew185_4330 5165778 - 5164303 - | hypothetical protein TERM 5842 5164538 - 5164526 - G 75 -7.7 -4.27467 | overlap 5164537 GCATAACGCAATAAA GAGGT AAA ACCTC GGCTGTTACTAAACT TERM 5843 5165003 - 5164990 - G 71 -6.7 -4.17048 | CTCTCCGCAAAACAA TGTCG ACCA CGACA GACCCACTTCTAGCT Shew185_4331 5166360 - 5165869 - | phosphopantetheine adenylyltransferase TERM 5844 5167386 - 5167368 - g 73 -2.3 -5.10497 | overlap 5167370 AAGTTAGCCAAAAAA TACGGCG TAGAG CACCGAA TTATCACACCTGGTT Shew185_4332 5166648 - 5167718 + | glycosyl transferase group 1 Shew185_4333 5168073 - 5169245 + | glycosyl transferase group 1 TERM 5845 5169276 - 5169251 - T 100 -16.3 -4.68705 | ACAAGGCTAACAAAA TGGGCCGATAT TAAA ATATCGGCCCA TAAGTAACAACAGCT Shew185_4334 5170376 - 5169294 - | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase Shew185_4335 5171484 - 5170399 - | glycosyl transferase group 1 TERM 5846 5171221 - 5171209 - G 71 -2.7 -5.00642 | overlap 5171183 TAAGTTAGATAAAAA CAAAT CGA ACTTG CCCACTTTAGATTCA Shew185_4336 5172619 - 5171576 - | glycosyl transferase family protein TERM 5847 5173401 - 5173391 - g 71 -6.8 -4.21772 | opp_overlap 5173388 TTCAATAAAGAACAA GGCA AAC TGCC AAGTCTTGCCTTCAC Shew185_4337 5172719 - 5173474 + | 3-deoxy-D-manno-octulosonic-acid kinase Shew185_4338 5174766 - 5173501 - | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein Shew185_4339 5174909 - 5175556 + | TetR family transcriptional regulator TERM 5848 5175684 - 5175700 + F 71 -3.7 -4.95155 | opp_overlap 5175684, overlap 5175698 CAAAACAGTGGCAAA CTTATGT TGC ACATTAG TTTTTATAATGTAAA TERM 5849 5176128 - 5176116 - g 86 -7.7 -4.90455 | AGATATCCATAAAAA GCTAG AAG CTAGC CTAAGCGAATTCCTC Shew185_4340 5175844 - 5177037 + | 2-amino-3-ketobutyrate coenzyme A ligase Shew185_4341 5177049 - 5178074 + | L-threonine 3-dehydrogenase TERM 5850 5178098 - 5178119 + F 79 -9.4 -3.63837 | opp_overlap 5178098 AGCATTACCTAGATA GGGGCTGT ACACTC GCAGCCCC TTGTTGCACACTTAT Shew185_4342 5178176 - 5178481 + | rhodanese domain-containing protein Shew185_4343 5178478 - 5179323 + | rhomboid family protein Shew185_4344 5180067 - 5179405 - | isoprenoid biosynthesis protein with amidotransferase-like domain TERM 5851 5181488 - 5181475 - g 77 -3.8 -5.09426 | GCTAAGCTTAAAAAA GCCA ACTTGA TGGC GGTAGATACCGAGAC Shew185_4345 5180413 - 5183220 + | DNA polymerase I TERM 5852 5183306 - 5183271 - T 100 -18.6 -4.62772 | opp_overlap 5183271 5183276 TTTAAAGTAAATAAA GCTAACCTGAATTCAA TATT TTGAACTCAGGTTAGC TCTCTCCCGTCTTAA TERM 5853 5183271 - 5183306 + T 100 -16.4 -2.91735 | opp_overlap 5183271, overlap 5183276 TTTAAAGTAAATAAA GCTAACCTGAATTCAA TATT TTGAACTCAGGTTAGC TCTCTCCCGTCTTAA TERM 5854 5183276 - 5183301 + T 70 -9.1 -3.16177 | opp_overlap 5183271, overlap 5183271 AGTAAATAAAGCTAA CCTGAATTCAA TATT TTGAACTCAGG TTAGCTCTCTCCCGT TERM 5855 5183425 - 5183414 - T 81 -5.8 -5.13741 | TTAAGTTAAGAAAAA CTGC ATCG GCAG CACAATGTATGACTC TERM 5856 5184132 - 5184156 + T 100 -14.4 -5.9663 | GAGCCAAATTCTGGC GCCTCAGCAA CTTGT TTGCTGAGGC TTTTTTTTGGTCTTT TERM 5857 5184318 - 5184342 + T 100 -12.9 -5.47218 | overlap 5184320 AAGAGCTAATATTTT TGGCCGGTGAC ACT GTCATCGGCTA TTTTTTTGCCTGAAA TERM 5858 5184320 - 5184340 + T 100 -13.3 -4.37763 | overlap 5184318 GAGCTAATATTTTTG GCCGGTGAC ACT GTCATCGGC TATTTTTTTGCCTGA Shew185_4346 5185127 - 5184468 - | GTPase EngB Shew185_4347 5185296 - 5185919 + | cytochrome c class I TERM 5859 5185939 - 5185954 + F 91 -6.1 -5.40072 | opp_overlap 5185939 5185938 AGTCAGTTAAGAAAG GGGTG TATTAC CACCC TTTTTTTACACCACC TERM 5860 5186317 - 5186297 - f 80 -11.3 -2.82516 | overlap 5186299 TGCCCCATCAGGACA CAGTTTACA TGA TGTAAACTG TAGCAAAGGAAGCTA TERM 5861 5186621 - 5186641 + F 100 -16.9 -5.69793 | opp_overlap 5186609 5186608 AAGCACCCTTTGTAA GGCGGCAGT TTA ACTGCCGCC TTTTTTCTTTGGTGT Shew185_4348 5186741 - 5187379 + | hypothetical protein Shew185_4349 5187470 - 5188030 + | hypothetical protein TERM 5862 5188046 - 5188085 + F 81 -12.2 -2.5547 | opp_overlap 5188050, overlap 5188045 5188053 5188075 ACCTCTCAGTGCTAA GGCATAGGGAACTCAGTT TTTT AGCTGTGCTCCTTATGCC ATTCATATAAGGAGT Shew185_4350 5188105 - 5188572 + | hypothetical protein TERM 5863 5188590 - 5188620 + F 81 -12 -2.64616 | opp_overlap 5188598, overlap 5188598 CCGCTCATTGTTATA CCTCAAGACCAC TTATGTT GTGGTTTTGAGG TCATCTCGATAAAAC Shew185_4351 5188870 - 5190210 + | coproporphyrinogen III oxidase TERM 5864 5190265 - 5190248 - T 100 -9.9 -5.25803 | opp_overlap 5190248 AACGCTCATAAAAAA TCCGACT CTAG AGTCGGA TTTTTTATTTATAGC TERM 5865 5190248 - 5190265 + T 100 -9.9 -5.72622 | opp_overlap 5190248 AACGCTCATAAAAAA TCCGACT CTAG AGTCGGA TTTTTTATTTATAGC Shew185_4352 5191299 - 5190304 - | adenosine deaminase TERM 5866 5190383 - 5190352 - G 77 -5 -4.86001 | ACTATCGGATAAAAA CGCCATTTCAACGC CGTT GCGTTGCACCTGCG CCAATTCGGCATCGG Shew185_4353 5191510 - 5193321 + | hypothetical protein TERM 5867 5193330 - 5193367 + F 100 -15.8 -3.09785 | opp_overlap 5193330 5193333, overlap 5193333 ACGCTAAGTTAATCA CAACCATGGGAGTC GTTATTTTCA GACTCCCATGGTTG TCTGTTACACTCTAG TERM 5868 5193367 - 5193330 - f 100 -15.8 -2.78891 | opp_overlap 5193330 5193333, overlap 5193333 ACGCTAAGTTAATCA CAACCATGGGAGTC GTTATTTTCA GACTCCCATGGTTG TCTGTTACACTCTAG TERM 5869 5193364 - 5193333 - f 89 -11.7 -3.54109 | opp_overlap 5193333 5193330, overlap 5193330 CTAAGTTAATCACAA CCATGGGAGTC GTTATTTTCA GACTCCCATGG TTGTCTGTTACACTC TERM 5870 5193333 - 5193364 + F 89 -11.7 -3.68738 | opp_overlap 5193330 5193333, overlap 5193330 CTAAGTTAATCACAA CCATGGGAGTC GTTATTTTCA GACTCCCATGG TTGTCTGTTACACTC TERM 5871 5193729 - 5193707 - g 89 -12.8 -3.47322 | opp_overlap 5193706 5193707 TCGTATGACAATCAA TCCGCACATG GGC CATGTGCGAA GATTTAATGATTATA Shew185_4354 5193417 - 5194400 + | alpha/beta hydrolase fold Shew185_4355 5196807 - 5194357 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 5872 5197048 - 5197066 + r 77 -10.3 -3.39856 | opp_overlap 5197048 TGCAGACGCAAAAAA GCCAGCT TATTC AGCTGGC TTCGTTACATCTCTA TERM 5873 5197066 - 5197048 - R 93 -10.3 -5.1287 | opp_overlap 5197048 TGCAGACGCAAAAAA GCCAGCT TATTC AGCTGGC TTCGTTACATCTCTA TERM 5874 5197261 - 5197272 + r 73 -2.2 -5.18866 | CACGTTAATAATAAT TCGG AAAG CTGA TTTTCTTTGTTTGAG TERM 5875 5198507 - 5198518 + r 72 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTGC TGTG TTTTTGATAAACAGT TERM 5876 5199024 - 5199040 + r 86 -9.4 -4.08546 | overlap 5199006 TTGGTCTTTCGGCGA GGGGGT TTTTC ACCCCC TTTATCGTTACTCAT TERM 5877 5199820 - 5199832 + r 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5878 5200338 - 5200308 - R 71 -9.8 -2.90194 | opp_overlap 5200326 5200330 5200331, overlap 5200311 5200317 AGTCGCTTAACCATA CAACCCAAATGAGT TTC ACTCACCTGAGTCG CATTGCGACCAGCTT TERM 5879 5200472 - 5200495 + r 88 -9 -4.56607 | opp_overlap 5200472, overlap 5200473 GTGTTTGAGAACTCA TGTTTAATGC TTGC GCATTAAACG TTTTGTAATTAATCA TERM 5880 5200473 - 5200494 + r 77 -10.3 -3.33241 | opp_overlap 5200472, overlap 5200472 TGTTTGAGAACTCAT GTTTAATGC TTGC GCATTAAAC GTTTTGTAATTAATC TERM 5881 5202506 - 5202520 + r 73 -8.6 -3.71917 | CCAGTTGGCTAGGGC TGCGTA TTC TACGCA TTTCCCGTTTCGCGT TERM 5882 5202530 - 5202564 + r 75 -10.1 -3.19192 | TACGCATTTCCCGTT TCGCGTCAAGGAGTT TTTTC AACTTCTTGCTGCGA TTGAATTAAGTGCCA TERM 5883 5202755 - 5202770 + r 86 -10.4 -4.09108 | opp_overlap 5202755 GATACGTATAAAAAA GGGGCT AAAA AGCCCC TTTATCTCGATTACG TERM 5884 5202770 - 5202755 - R 100 -10.4 -5.29782 | opp_overlap 5202755 GATACGTATAAAAAA GGGGCT AAAA AGCCCC TTTATCTCGATTACG Shew185_4356 5204265 - 5202838 - | cytochrome c oxidase cbb3 type accessory protein FixG Shew185_4357 5204357 - 5204707 + | hypothetical protein Shew185_4358 5204832 - 5205737 + | naphthoate synthase TERM 5885 5205771 - 5205800 + F 90 -9.3 -5.03715 | opp_overlap 5205777, overlap 5205777 CTTTACTGCTAGCAG CCCAAAGCCCTCA TGAG TGAGGGCTTTATG TTTTTTACAACTGAT TERM 5886 5205777 - 5205794 + F 93 -11.3 -4.64992 | opp_overlap 5205777, overlap 5205771 TGCTAGCAGCCCAAA GCCCTCA TGAG TGAGGGC TTTATGTTTTTTACA TERM 5887 5205794 - 5205777 - f 88 -11.3 -3.62096 | opp_overlap 5205777 5205771 TGCTAGCAGCCCAAA GCCCTCA TGAG TGAGGGC TTTATGTTTTTTACA Shew185_4359 5205923 - 5206126 + | hypothetical protein TERM 5888 5206192 - 5206219 + T 73 -8.5 -3.73386 | opp_overlap 5206198, overlap 5206198 TTGTGAATCTAAATG AAAAAACCGCC AATAAA GGCGGTTTTTA TTTAAATGCTTATAT TERM 5889 5206213 - 5206198 - T 93 -7.5 -5.38497 | opp_overlap 5206192 5206198 ATCTAAATGAAAAAA CCGCC AATAAA GGCGG TTTTTATTTAAATGC TERM 5890 5206198 - 5206213 + T 90 -7.5 -5.30616 | opp_overlap 5206198, overlap 5206192 ATCTAAATGAAAAAA CCGCC AATAAA GGCGG TTTTTATTTAAATGC Shew185_4360 5208064 - 5206235 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing Shew185_4361 5208883 - 5208113 - | DeoR family transcriptional regulator TERM 5891 5209056 - 5209030 - R 100 -11.6 -5.8187 | opp_overlap 5209030 5209037 5209038, overlap 5209053 CAGCCAATAAAAAAA GCCGCTTATCAT TTA AGGACAAGCGGC TTTAAATGAATTTAA TERM 5892 5209030 - 5209056 + r 79 -9.4 -3.70076 | opp_overlap 5209030 5209053, overlap 5209037 5209038 CAGCCAATAAAAAAA GCCGCTTATCAT TTA AGGACAAGCGGC TTTAAATGAATTTAA Shew185_4362 5211204 - 5209084 - | TonB-dependent siderophore receptor TERM 5893 5211444 - 5211458 + r 77 -8.5 -3.93695 | opp_overlap 5211444 TGACTAAATATAAAA GCGGC ACATG GCCGC TTTATAGATACTCAG TERM 5894 5211458 - 5211444 - R 88 -8.5 -4.82128 | opp_overlap 5211444 TGACTAAATATAAAA GCGGC ACATG GCCGC TTTATAGATACTCAG Shew185_4363 5212870 - 5211488 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 5895 5211677 - 5211661 - G 85 -5.9 -5.10461 | CCGAGCCAACAAAAA CATTATC TTC GATAACG GTAAGATGCTTATTC TERM 5896 5213038 - 5213021 - R 100 -12.7 -5.24129 | opp_overlap 5213021 TTCGGCCACAAAAAA GGCGACC TTAT GGTCGCC TTTTTTCACAAACAA TERM 5897 5213021 - 5213038 + r 100 -12.7 -5.00616 | opp_overlap 5213021 TTCGGCCACAAAAAA GGCGACC TTAT GGTCGCC TTTTTTCACAAACAA Shew185_4364 5213487 - 5213059 - | F0F1 ATP synthase subunit epsilon TERM 5898 5213503 - 5213526 + r 81 -5.4 -5.05606 | opp_overlap 5213506, overlap 5213499 5213506 CCCGTTCTCCTTAAG AAACTAAGTA TTGC TACTTAGTTA TTTCTTTTTGTTCGC TERM 5899 5213506 - 5213523 + r 81 -7.1 -4.5815 | opp_overlap 5213506, overlap 5213503 5213499 GTTCTCCTTAAGAAA CTAAGTA TTGC TACTTAG TTATTTCTTTTTGTT TERM 5900 5213523 - 5213506 - R 76 -7.1 -4.15044 | opp_overlap 5213506 5213503 5213499 GTTCTCCTTAAGAAA CTAAGTA TTGC TACTTAG TTATTTCTTTTTGTT Shew185_4365 5214915 - 5213524 - | F0F1 ATP synthase subunit beta TERM 5901 5214517 - 5214501 - G 71 -7.3 -3.98083 | overlap 5214504 TAGCGAATGGACAAA CAAGGTC AAT AACCTTG ATACCAGTCTCTAAT Shew185_4366 5215811 - 5214951 - | F0F1 ATP synthase subunit gamma TERM 5902 5215458 - 5215440 - G 77 -6.6 -4.58283 | overlap 5215442 GAAGTTTTTGAAAAA CTGCACAC TAC GTGCGCCG ATTGGGCAAAATTCA TERM 5903 5215705 - 5215717 + g 80 -9.1 -4.2828 | GCAGCCATGCGTTCC TGCGC TCT GCGCA TTTTGCTGGCTGCCA TERM 5904 5215834 - 5215853 + r 82 -12.2 -3.01745 | overlap 5215836 CTCCAATCTGGACCT GAGGTGTC TTAA GACACCTC TATCATTGTTACCAG Shew185_4367 5217403 - 5215862 - | F0F1 ATP synthase subunit alpha TERM 5905 5217103 - 5217085 - G 76 -9.5 -3.64487 | CTAGAGTGTTAACAA CGCGGCC AAGAA GACCGCG GCCAACTGGAACTTC Shew185_4368 5217951 - 5217418 - | F0F1 ATP synthase subunit delta Shew185_4369 5218437 - 5217967 - | F0F1 ATP synthase subunit B Shew185_4370 5218726 - 5218475 - | F0F1 ATP synthase subunit C Shew185_4371 5219627 - 5218791 - | F0F1 ATP synthase subunit A TERM 5906 5219000 - 5219012 + g 74 -6.3 -4.3467 | opp_overlap 5218992 CAAAGAGTCGCAATG CCAAT GAA ATTGG TTTTGCTATCAAAGT Shew185_4372 5220023 - 5219640 - | ATP synthase I chain Shew185_4373 5221127 - 5220249 - | parB-like partition protein TERM 5907 5220699 - 5220720 + g 71 -8.8 -3.76373 | opp_overlap 5220691, overlap 5220693 5220690 CATTAAACGTTGCAA TGCAATGG CTTCTT CCATTGCA TTTAAATCTTCACGC Shew185_4374 5221925 - 5221137 - | cobyrinic acid ac-diamide synthase Shew185_4375 5222619 - 5221999 - | glucose-inhibited division protein B TERM 5908 5222032 - 5222064 + g 85 -10.7 -3.96216 | overlap 5222033 CAATAAATGTCTTTG TTCATCGAGTTTAGG CAC CTTAAGCTCGATGAC TTCTTTCACTGCAAA TERM 5909 5222033 - 5222063 + g 90 -14.2 -2.97408 | overlap 5222032 AATAAATGTCTTTGT TCATCGAGTTTAGG CAC CTTAAGCTCGATGA CTTCTTTCACTGCAA TERM 5910 5222708 - 5222681 - R 73 -9.9 -3.09718 | opp_overlap 5222685, overlap 5222678 5222685 GAAGCCCGAAAACGA TGAAGGGAAGC CTGAAT GCTTCCCTTCT ATGACCTAAGCAGCG TERM 5911 5222704 - 5222685 - R 72 -9.3 -3.37533 | opp_overlap 5222685, overlap 5222681 5222678 CCCGAAAACGATGAA GGGAAGC CTGAAT GCTTCCC TTCTATGACCTAAGC TERM 5912 5222685 - 5222704 + r 74 -9.3 -3.50393 | opp_overlap 5222685 5222681 5222678 CCCGAAAACGATGAA GGGAAGC CTGAAT GCTTCCC TTCTATGACCTAAGC Shew185_4376 5224626 - 5222737 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 5913 5223959 - 5223969 + g 73 -2.4 -5.11063 | GACATCACAGGTAAC GGAG AAT CACC TTTTTGTTCAGTCAT TERM 5914 5224930 - 5224895 - R 100 -18.6 -2.89935 | gap 1, opp_overlap 5224863 5224860 AAACATGGGGATAGA TC-GCCTACTTATCCAC AAG GTGGATAAGTAGGCAGA TCGGACTGTGAATAG Shew185_4377 5225506 - 5225066 - | flavodoxin TERM 5915 5225739 - 5225718 - R 100 -13.1 -4.68908 | opp_overlap 5225718, overlap 5225734 TTTAGTTAAAAGAAA GGCTTGTTG AGCA CAACAAGCC TTAGCTAGAAAAGCA TERM 5916 5225718 - 5225739 + r 91 -13.1 -3.05384 | opp_overlap 5225718 5225734 TTTAGTTAAAAGAAA GGCTTGTTG AGCA CAACAAGCC TTAGCTAGAAAAGCA Shew185_4378 5227134 - 5225773 - | tRNA modification GTPase TrmE TERM 5917 5227204 - 5227176 - R 71 -9.6 -2.84053 | opp_overlap 5227181, overlap 5227181 CTAAATCATGTAAAG GAAAAGGCGGCC AATTA AGCCGCCTTTTA GTGTCATTCGTTCAC TERM 5918 5227199 - 5227181 - R 91 -9.5 -4.56914 | opp_overlap 5227181, overlap 5227176 TCATGTAAAGGAAAA GGCGGCC AATTA AGCCGCC TTTTAGTGTCATTCG TERM 5919 5227181 - 5227199 + r 85 -8.8 -4.39287 | opp_overlap 5227181 5227176 TCATGTAAAGGAAAA GGCGGC CAATTAA GCCGCC TTTTAGTGTCATTCG TERM 5920 5227259 - 5227273 + r 90 -8.6 -5.00616 | GTCTTGCAAATCTTA GGCTTA TTT TAAGCC TTTTTTCGCCAGACC Shew185_4379 5228887 - 5227262 - | 60 kDa inner membrane insertion protein Shew185_4380 5229145 - 5228891 - | hypothetical protein Shew185_4381 5229468 - 5229112 - | ribonuclease P protein component TERM 5921 5229452 - 5229418 - GR 95 -13 -3.77209 | AAATACAGATTTAAA TTGCGCGGGAGTTA ACAAACG TAACTCCCGCGAAA AGGTATAGCTAGTCA Shew185_4382 5229621 - 5229484 - | 50S ribosomal protein L34