TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.525253 %AT, 4473354 nt, 32369 terms. Intergenic: 0.599046 %AT, H2T: 631921 nt, 5602 terms; T2T: 212137 nt, 4730 terms; H2H: 246051 nt, 3636 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|157373141|ref|NC_009831.1| Shewanella sediminis HAW-EB3, complete genome (length 5517674) Ssed_0001 1882 - 521 - | tRNA modification GTPase TrmE TERM 1 1949 - 1973 + r 100 -11.5 -5.1963 | opp_overlap 1949 ATATAAAACAAAAAA GCGGTCAATAC TAA GTATTAACCGC TTTTTCTTAGTTGGA TERM 2 1973 - 1949 - R 100 -13.7 -5.8901 | opp_overlap 1949 ATATAAAACAAAAAA GCGGTCAATAC TAA GTATTAACCGC TTTTTCTTAGTTGGA Ssed_0002 3631 - 1997 - | 60 kDa inner membrane insertion protein Ssed_0003 3892 - 3635 - | hypothetical protein Ssed_0004 4221 - 3859 - | ribonuclease P protein component Ssed_0005 4367 - 4230 - | 50S ribosomal protein L34 Ssed_0006 4812 - 6200 + | chromosomal replication initiation protein Ssed_0007 6220 - 7320 + | DNA-directed DNA polymerase TERM 3 7373 - 7346 - f 78 -4.2 -5.20633 | opp_overlap 7352, overlap 7347 7352 AAAAACACACAAAAA TTAAAAGACTGT TTAT ACAGTCTTTTTT TATGCCATTTTTATA TERM 4 7372 - 7347 - f 70 -7.7 -3.6872 | opp_overlap 7352, overlap 7346 7352 AAAACACACAAAAAT TAAAAGACTGT TTAT ACAGTCTTTTT TTATGCCATTTTTAT TERM 5 7367 - 7352 - f 85 -7.6 -4.84033 | opp_overlap 7352, overlap 7347 7346 ACACAAAAATTAAAA GACTGT TTAT ACAGTC TTTTTTTATGCCATT TERM 6 7352 - 7367 + F 100 -7.6 -5.63504 | opp_overlap 7352 7347 7346 ACACAAAAATTAAAA GACTGT TTAT ACAGTC TTTTTTTATGCCATT Ssed_0008 7614 - 8696 + | DNA replication and repair protein RecF TERM 7 9502 - 9518 + G 71 -7.3 -4.07687 | TGGAATGATGGTTTT CAGGAGA ATA TCTTCTG TTTTACCAACAACAT Ssed_0009 8689 - 11130 + | DNA topoisomerase (ATP-hydrolyzing) TERM 8 11214 - 11191 - T 73 -6.6 -4.2651 | opp_overlap 11193, overlap 11188 11193 AAAGACTGAAAACAA GAGCCCTGGA GAGA TCCGGGGCTT TTTTGTATAGGGATA TERM 9 11212 - 11193 - T 76 -9.2 -3.71224 | opp_overlap 11193, overlap 11191 11188 AGACTGAAAACAAGA GCCCTGGA GAGA TCCGGGGC TTTTTTGTATAGGGA TERM 10 11193 - 11212 + T 100 -11.4 -5.36441 | opp_overlap 11193 11191 11188 AGACTGAAAACAAGA GCCCTGGA GAGA TCCGGGGC TTTTTTGTATAGGGA Ssed_0010 12326 - 11580 - | LamB/YcsF family protein Ssed_0011 13456 - 12470 - | UreA amidolyase related protein Ssed_0012 14171 - 13485 - | hypothetical protein Ssed_0013 14650 - 15705 + | putative signal transduction protein TERM 11 15731 - 15712 - T 100 -12.2 -5.76949 | opp_overlap 15712 GAGTTTTAAAAAAAA GCCTCAGA TTTC TCTGAGGC TTTTTAGTATCTAGT TERM 12 15712 - 15731 + T 100 -12.2 -4.85129 | opp_overlap 15712 GAGTTTTAAAAAAAA GCCTCAGA TTTC TCTGAGGC TTTTTAGTATCTAGT TERM 13 15752 - 15770 + T 71 -7.4 -3.96068 | opp_overlap 15755, overlap 15747 15755 AGTATCTAGTTCCTA GAACCTAG GCT CTAGGATC TTCTTATTGCAGTAA Ssed_0014 17843 - 15774 - | glycyl-tRNA synthetase subunit beta TERM 14 16099 - 16118 + g 74 -9.2 -3.63837 | GATACACGTTTGTTG GCAGCGGC AAGT GCCGATGC TTGTTCAAGACTTCT TERM 15 16813 - 16826 + g 74 -6.7 -4.37211 | AAACTCGTAAGGCGA GACTC CAGA GAGTC TTTCTTATCGGTTTC TERM 16 17710 - 17732 + g 100 -7.1 -5.65513 | gap 1 GCCGCATGCCATACT GCAG-ACTCA AAGC TGAGTTCTGC TTTTTTTAGTTCATC Ssed_0015 18718 - 17855 - | glycyl-tRNA synthetase subunit alpha TERM 17 19232 - 19222 - g 70 -2.4 -4.93365 | CTCGATAATCAAAAA CGCC CGC GGCT ATATCAGCTATACAG Ssed_0016 18917 - 19507 + | DNA-3-methyladenine glycosylase I TERM 18 19507 - 19528 + F 72 -8.7 -3.56862 | opp_overlap 19508, overlap 19499 19508 19522 19526 ATCCGAGGGAGAATA ACGCTCCTT CTAT AAGGAGCGG TTTAAGACCGTTTCT TERM 19 19508 - 19527 + F 81 -12.2 -2.73635 | opp_overlap 19508, overlap 19499 19507 19522 19526 TCCGAGGGAGAATAA CGCTCCTT CTAT AAGGAGCG GTTTAAGACCGTTTC TERM 20 19527 - 19508 - f 91 -12.2 -3.8211 | opp_overlap 19499 19508 19507 19522 19526 TCCGAGGGAGAATAA CGCTCCTT CTAT AAGGAGCG GTTTAAGACCGTTTC TERM 21 19526 - 19538 + F 70 -5.5 -4.43877 | opp_overlap 19508, overlap 19508 19507 19522 TCCTTCTATAAGGAG CGGTT TAA GACCG TTTCTTTGGCCGTTA Ssed_0017 19576 - 20742 + | chloramphenicol O-acetyltransferase TERM 22 20781 - 20812 + T 100 -13.2 -4.54477 | opp_overlap 20786, overlap 20786 GAGGTTAGATATTAA AAAAAGAGTGTTCC ACGT GGAACACTCTTTTA TTTTATCGCTTTTCC TERM 23 20786 - 20807 + T 100 -13.1 -5.19275 | opp_overlap 20786, overlap 20781 TAGATATTAAAAAAA GAGTGTTCC ACGT GGAACACTC TTTTATTTTATCGCT TERM 24 20807 - 20786 - T 100 -13.1 -5.60864 | opp_overlap 20786 20781 TAGATATTAAAAAAA GAGTGTTCC ACGT GGAACACTC TTTTATTTTATCGCT TERM 25 20855 - 20865 + T 76 -6.8 -4.43173 | TCTATCTATGTCTTT TCGC TTA GCGA TTTTAAATTATTTTT Ssed_0018 24178 - 20933 - | amidohydrolase TERM 26 22087 - 22106 + g 88 -8.6 -4.70659 | opp_overlap 22090 CTGTATCGGCCCCAC CAACCGCA ACTA TGTGGTTG TTTTTGACTATGACA TERM 27 23963 - 23980 + g 71 -8.5 -3.66356 | opp_overlap 23963 ATAGATATCACCTAA CATATCG AACA CGATATG TTTGCCATTGGGACT Ssed_0019 24845 - 24405 - | hypothetical protein Ssed_0020 25115 - 24870 - | SirA family protein Ssed_0021 25789 - 25322 - | YbaK/EbsC protein TERM 28 26040 - 26009 - R 90 -10.3 -4.4648 | gap 1, opp_overlap 26009 26012 ACGTGGATCATAAAA GAAGACCCC-AGGA ACGAG TCCTTAGGGTCTTC TTACTTAACTTAAAG Ssed_0022 27236 - 26073 - | 3-ketoacyl-CoA thiolase TERM 29 26311 - 26341 + g 74 -11.2 -2.78712 | opp_overlap 26329, overlap 26308 TGAGCGGCGAAGGCT TCGTTGAGCTCGAT TAC ATCGAGATCATCGA TACTTAAGTTAGCAC TERM 30 27116 - 27128 + g 70 -7.7 -3.80858 | CCAGCTGAGGGTTAC GCACT AAC AGTGC TTTCATCAATTCTGC Ssed_0023 29408 - 27258 - | multifunctional fatty acid oxidation complex subunit alpha TERM 31 28419 - 28394 - G 76 -9 -3.7941 | opp_overlap 28399 TATCTTTCATAATAA TCGGAGTGCC TTTGCT GGCACTCTGA TAGGCGATACCACCA Ssed_0024 29795 - 31114 + | proline dipeptidase Ssed_0025 31167 - 31781 + | hypothetical protein Ssed_0026 31956 - 33413 + | TrkH family potassium uptake protein Ssed_0027 33511 - 34038 + | protoporphyrinogen oxidase TERM 32 34147 - 34130 - T 73 -6.9 -4.27316 | opp_overlap 34131, overlap 34131 TCCGCTAACCCAAAA GGCCTGC TAAT GCAGGCT TTTTAACACTTAATG TERM 33 34146 - 34131 - T 75 -10.4 -3.16068 | opp_overlap 34131, overlap 34130 CCGCTAACCCAAAAG GCCTGC TAAT GCAGGC TTTTTAACACTTAAT TERM 34 34131 - 34146 + T 91 -10.4 -4.62872 | opp_overlap 34130 34131 CCGCTAACCCAAAAG GCCTGC TAAT GCAGGC TTTTTAACACTTAAT Ssed_0028 34488 - 34180 - | regulatory protein, ArsR Ssed_0029 34690 - 35229 + | protoporphyrinogen oxidase Ssed_0030 35726 - 36166 + | hypothetical protein Ssed_0031 38044 - 36602 - | TrkH family potassium uptake protein TERM 35 37811 - 37799 - G 74 -2.7 -5.0133 | overlap 37804 37807 CATTGCGGCAAAAAA GCTAA CGA TTAAC CAGGTTAAGCTGGTC TERM 36 38078 - 38067 - R 73 -5.8 -4.58283 | CAACCCTTTGAAAAA CGTC GGTT GACG ATAAGGTGCTAGAAG Ssed_0032 39496 - 38087 - | potassium transporter peripheral membrane component TERM 37 39127 - 39117 - G 70 -2.4 -4.92757 | TCATCAATAATAAAA CCGC CAC GAGG GCTATTATCATTTTT TERM 38 39188 - 39210 + g 70 -9.9 -3.16492 | opp_overlap 39188, overlap 39186 CCTTAGGGCAAGGTA TTGCTCGGA GCGGA TCCGGGCAA TCTTAGTGGGTGTCC Ssed_0033 40786 - 39506 - | sun protein Ssed_0034 41777 - 40788 - | methionyl-tRNA formyltransferase TERM 39 41138 - 41160 + g 74 -6.3 -4.44915 | opp_overlap 41138 ATTTACTCCAGTCAA GCTCAGC CTCCTCTTT GCTGAGC TTTTCTGCGTAATTA Ssed_0035 42297 - 41785 - | peptide deformylase Ssed_0036 42423 - 43526 + | peptidoglycan-binding LysM Ssed_0037 43565 - 44671 + | DNA protecting protein DprA TERM 40 44901 - 44874 - g 70 -10 -3.18023 | overlap 44872 TGATCACGACCAACA CTCTTTCCGAAT TTAT ACTCAGAAAGAG ATGGATAAGCTTGAT Ssed_0038 44674 - 45147 + | hypothetical protein TERM 41 45182 - 45166 - T 86 -10.1 -4.08557 | opp_overlap 45166 CGCTTGAAATAAGAA GGAGGCA TAA CGCCTCC TTTTTTGTGTCTGGA TERM 42 45166 - 45182 + T 100 -9.4 -5.4251 | opp_overlap 45166 CGCTTGAAATAAGAA GGAGGC ATAAC GCCTCC TTTTTTGTGTCTGGA Ssed_0039 47139 - 45367 - | collagenase TERM 43 45938 - 45952 + g 83 -11.4 -3.54424 | overlap 45925 TAGGCGAAGAATGTT GCCTGG TTA CCAGGC TTTGACGGAGTACCC TERM 44 47493 - 47462 - g 73 -8 -4.053 | opp_overlap 47471 ACGAGTCGATAGAAA CCCAGGTGATTGAG GGAT CTCAATGTCCTGAG TGTGGACACGAGTTA Ssed_0040 47275 - 47838 + | DNA topoisomerase type IA Zn finger domain-containing protein TERM 45 47827 - 47844 + F 73 -10.5 -2.88768 | opp_overlap 47826 47827, overlap 47826 47823 47829 CAATGTAAGTATAAG CGCGCCC TATA GGGCGTG ATTGTTAGTATTAGG TERM 46 47829 - 47842 + F 72 -9.5 -2.98778 | opp_overlap 47827 47826, overlap 47827 47826 47823 ATGTAAGTATAAGCG CGCCC TATA GGGCG TGATTGTTAGTATTA Ssed_0041 47939 - 48496 + | SUA5/YciO/YrdC/YwlC family protein Ssed_0042 48531 - 49451 + | coproporphyrinogen III oxidase Ssed_0043 49687 - 50502 + | shikimate 5-dehydrogenase TERM 47 50771 - 50745 - g 73 -9.6 -3.36991 | overlap 50743 GAGGAGGTTGAAACA CTCATCGAAT TGGAGTC ATTCGATGAG CAGGGTCGGCTTGTA Ssed_0044 50517 - 50795 + | hypothetical protein Ssed_0045 51383 - 50829 - | carbonic anhydrase TERM 48 51833 - 51817 - H 82 -10.9 -3.61178 | TTGAGTTATTCGAAA TTGCCTC TTT GAGGCAA TCAAAAATTTTACTC TERM 49 54325 - 54313 - H 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 50 55123 - 55107 - H 75 -8 -4.08546 | overlap 55120 ATGAGTAACGATAAA GGGAGT GAAAA ACTCCC TCGCCGAAAGACCAA TERM 51 55630 - 55619 - H 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 52 57027 - 57006 - H 100 -15.9 -4.14257 | opp_overlap 57006 CCTAATAACGATAAA GCCCGTTGC TAAC GCAACGGGC TTTTTTCGTTTTAGT TERM 53 57006 - 57027 + H 100 -15.9 -5.48054 | opp_overlap 57006 CCTAATAACGATAAA GCCCGTTGC TAAC GCAACGGGC TTTTTTCGTTTTAGT TERM 54 57855 - 57842 - H 70 -9.5 -2.63596 | TTCGATTGTATAGGA CCGGC TTTA GCCGG GAATAGCTCATTTCG Ssed_0046 58078 - 60588 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Ssed_0047 61006 - 60833 - | hypothetical protein Ssed_0048 61601 - 61185 - | type IV pilus assembly PilZ TERM 55 61425 - 61440 + g 73 -3.2 -4.96848 | overlap 61426 AGCGATACCCAACTT GTGGCT CTGT AGCCAG TTTTTATGTAACAGG Ssed_0049 62608 - 61598 - | OmpA/MotB TERM 56 62280 - 62290 + g 76 -8.2 -4.08974 | ATATGGTTGTGTATT GCCG GCC CGGC TTTCTCTACTCCGGT Ssed_0050 63465 - 62608 - | MotA/TolQ/ExbB proton channel Ssed_0051 64203 - 63481 - | flagellar biosynthesis sigma factor Ssed_0052 64672 - 64214 - | flagellar basal body-associated protein FliL Ssed_0053 65839 - 64688 - | hypothetical protein Ssed_0054 66155 - 65829 - | hypothetical protein TERM 57 65983 - 66011 + gr 79 -9.5 -3.78922 | overlap 65966 65965 66007 GTTGCCAGAGCTTTA CGGGCGACGAGTT GTG ATTTCGTCGCCGG TTTACCTGCTTTTTT TERM 58 66007 - 66020 + gr 82 -3.7 -5.52384 | overlap 65983 AGTTGTGATTTCGTC GCCGG TTTA CCTGC TTTTTTTAGTGCCAG Ssed_0055 66504 - 66124 - | flagellar protein FliS Ssed_0056 67894 - 66518 - | flagellar hook-associated 2 domain-containing protein TERM 59 67175 - 67189 + g 76 -11.4 -2.78992 | overlap 67174 TATGGTGCTGCTTTC GCCCAC GCC GTGGGC CTTATTAAGCTCAAT TERM 60 68236 - 68251 + r 81 -11.8 -2.89683 | opp_overlap 68236 TGCGGATATTAAAAA GGGGCC TCAA GGCCCC TATATGCAGTGCGGT TERM 61 68251 - 68236 - R 100 -11.8 -4.8048 | opp_overlap 68236 TGCGGATATTAAAAA GGGGCC TCAA GGCCCC TATATGCAGTGCGGT Ssed_0057 69085 - 68291 - | flagellin domain-containing protein TERM 62 69521 - 69537 + r 74 -5 -4.67353 | opp_overlap 69521, overlap 69523 TCGGATGCGCTAAAA CTCGCC TGATT GGCGTG TTTTTGGCTGCCTAC Ssed_0058 70700 - 69675 - | hypothetical protein Ssed_0059 71627 - 70710 - | flagellar hook-associated protein 3 TERM 63 71315 - 71331 + g 71 -9.4 -3.61398 | opp_overlap 71325 AGGCTGCCCTGTCTT CGGCAG AAAGG CTGCCG TTGTTGGCCGCGACC Ssed_0060 73013 - 71640 - | flagellar hook-associated protein FlgK Ssed_0061 73517 - 73080 - | peptidoglycan hydrolase Ssed_0062 74644 - 73517 - | flagellar basal body P-ring protein TERM 64 74270 - 74283 + g 71 -4.5 -4.65895 | gap 1 GGTCATCAGCAGGGT GCC-GC CAC GCAGGC TTTTTGCATCACCCA TERM 65 74619 - 74605 - G 75 -5.7 -4.62783 | TATCCACGGTAAAAA TGAGC AGTAG GCTCA TGATCAAAATTAGGG Ssed_0063 75401 - 74739 - | flagellar basal body L-ring protein TERM 66 74923 - 74939 + g 79 -9.5 -3.85817 | opp_overlap 74914 AAATATTCATCCCCC TGGTTGA GTC TCAACCA TTTCTCCCCCCGGAT Ssed_0064 76231 - 75446 - | flagellar basal-body rod protein FlgG TERM 67 75622 - 75662 + g 82 -11.8 -3.3514 | overlap 75613 75636 75659 GATCGCCGGCAACGC CCTCTATGGCGGCTCCGG ATGCG CCGGTTTCGCGATAGAGG TTGTCGCCTCTGGCT TERM 68 76137 - 76100 - G 74 -6.3 -4.38712 | gap 1, overlap 76102 76112 CTGAGTCTGATAAAA CAGGTCATTAAACGCGAC TCT GTCACGCTTAAAG-CCGG TTGTATTCACGTTAG Ssed_0065 77036 - 76302 - | flagellar basal-body rod protein FlgF Ssed_0066 78243 - 77047 - | flagellar hook protein FlgE Ssed_0067 78937 - 78272 - | flagellar hook capping protein TERM 69 78955 - 78990 + r 77 -8.4 -3.83675 | gap 1, overlap 78960 TGTCTAACTCCGACT CATATCTGAAGCTGTCG TTT CGACATCTTCAG-TCTG TTATTCATTAAGTTA TERM 70 78960 - 78986 + r 95 -13.8 -3.31329 | overlap 78955 AACTCCGACTCATAT CTGAAGCTGTCG TTT CGACATCTTCAG TCTGTTATTCATTAA Ssed_0068 79422 - 79003 - | flagellar basal-body rod protein FlgC Ssed_0069 79871 - 79521 - | flagellar basal body rod protein FlgB Ssed_0070 79958 - 80704 + | SAF domain-containing protein Ssed_0071 80780 - 81064 + | hypothetical protein TERM 71 81042 - 81060 + F 72 -8.8 -3.49886 | opp_overlap 81027 81024 81042 81041 81045 CGGCTATCTCAGAAG CCATGCTG CAA CAGCACGG TTAATTATGTCGAAT TERM 72 81060 - 81042 - f 76 -11 -2.59564 | opp_overlap 81042, overlap 81027 81024 81041 81045 CGGCTATCTCAGAAG CCATGCTG CAA CAGCACGG TTAATTATGTCGAAT Ssed_0072 81067 - 81504 + | hypothetical protein Ssed_0073 81951 - 81517 - | hypothetical protein Ssed_0074 83309 - 81966 - | FliI/YscN family ATPase TERM 73 82302 - 82337 + g 70 -9.8 -3.22223 | gap 1, opp_overlap 82309, overlap 82305 82309 82310 TACCAGGTGACCATC CAAGATAGCCCTTGCCG CAT CGGCAATGGG-ATCTTG TTGATCATCGCCTTC TERM 74 82310 - 82331 + g 72 -10.9 -2.66963 | gap 1, opp_overlap 82309, overlap 82309 82305 82302 GACCATCCAAGATAG CCC-TTGCCG CAT CGGCAATGGG ATCTTGTTGATCATC TERM 75 83322 - 83332 + r 73 -6.8 -4.30231 | CATCGATAGGGAGCT CAGC TTC GCTG TTTGTGTTGCTTGTT Ssed_0075 84057 - 83299 - | flagellar assembly protein H Ssed_0076 85070 - 84057 - | flagellar motor switch protein G TERM 76 85121 - 85138 + r 71 -4.9 -4.49389 | gap 1, opp_overlap 85121, overlap 85125 GGGATTTTTTTGAAA CGATGAGA TCA TCTC-TCG TTTTCGTTATCGCCT Ssed_0077 86841 - 85129 - | flagellar MS-ring protein Ssed_0078 87276 - 86938 - | flagellar hook-basal body complex subunit FliE Ssed_0079 88620 - 87319 - | sigma-54 dependent trancsriptional regulator Ssed_0080 89521 - 88607 - | hypothetical protein Ssed_0081 90188 - 91054 + | hypothetical protein Ssed_0082 91135 - 91491 + | flagellar motor switch protein FliN Ssed_0083 91494 - 92222 + | flagellar biosynthesis protein FliP TERM 77 92259 - 92240 - f 80 -6.4 -4.82901 | opp_overlap 92242 92244, overlap 92242 GGTTTTGGATAAAAA TAGCCGAT AGTT ATCGGCTG TCGTTTAAAGATGGC TERM 78 92257 - 92242 - f 83 -9 -4.03995 | opp_overlap 92242 92244, overlap 92240 TTTTGGATAAAAATA GCCGAT AGTT ATCGGC TGTCGTTTAAAGATG TERM 79 92487 - 92500 + G 71 -4.5 -4.5774 | overlap 92480 92488 CATCTATTTGGTGGT TGCCA TGGT TGGCG TTTTGGTTGTTCCTA TERM 80 92647 - 92661 + G 71 -8.6 -3.76781 | opp_overlap 92649 CAGTGGCTATTGCAA CAGATC TCA GATCTG TTTGATCGCCTGTTT Ssed_0084 92434 - 92703 + | export protein FliQ Ssed_0085 92706 - 93479 + | flagellar biosynthetic protein FliR TERM 81 93827 - 93838 + G 75 -3.6 -5.0925 | TGGCGGGATCTATGC CTGG TGGA CCGG TTTTTAATTTTAAAA Ssed_0086 93496 - 94626 + | flagellar biosynthetic protein FlhB Ssed_0087 94830 - 96911 + | flagellar biosynthesis protein FlhA Ssed_0088 98034 - 97042 - | lysophospholipase TERM 82 97137 - 97119 - G 73 -4.5 -4.82901 | opp_overlap 97118 CCTGCTCCATAAAAA CCTCATG ACGTG CATGGGG AATATTAATGAGTTG TERM 83 97167 - 97149 - G 74 -11 -2.84723 | opp_overlap 97159 97161 GGGGAATATTAATGA GTTGGCAG AGT CCGCCAAC GGCGTGATATTGAGC Ssed_0089 99968 - 98169 - | hypothetical protein TERM 84 100109 - 100125 + r 86 -9.4 -4.09542 | opp_overlap 100109 TTCAGGCACAAAAAA GCCGAC GATGA GTCGGC TTTCTATGAGTATTT TERM 85 100125 - 100109 - R 100 -9.4 -5.28176 | opp_overlap 100109 TTCAGGCACAAAAAA GCCGAC GATGA GTCGGC TTTCTATGAGTATTT Ssed_0090 101500 - 100160 - | coproporphyrinogen III oxidase Ssed_0091 102273 - 101794 - | hypothetical protein TERM 86 102172 - 102182 + g 80 -8.2 -4.41616 | CTGCTGTCGCTTTAA CCGC TGT GCGG TTTGTTTACGAAGCT TERM 87 102328 - 102309 - R 86 -7.9 -4.96848 | opp_overlap 102309 102307 102305 CTTGTTATAGAAAAA TGGCATC GAAAGA GATGCCA TCTATTATACTCAAC TERM 88 102334 - 102388 + r 100 -16.1 -2.95448 | gap 1, opp_overlap 102338 102343, overlap 102344 102355 102381 102383 AGAGATGCCATCTAT TATACTCAACCCACTTCAAGATGCAG GGTT CAGCATTTTGAAGTGGTTTG-GTATA TGTATACCTATTCGT TERM 89 102384 - 102338 - R 73 -10.3 -2.80935 | gap 1, opp_overlap 102334 102344 102355 102381 102383, overlap 102343 ATGCCATCTATTATA CTCAACCCACTTCAAGATGCAG GGTT CAGCATTTTGAAGTGGTTTG-G TATATGTATACCTAT TERM 90 102380 - 102343 - R 73 -9.9 -3.14647 | opp_overlap 102334 102344 102355, overlap 102338 ATCTATTATACTCAA CCCACTTCAAGATGCAG GGTT CAGCATTTTGAAGTGGT TTGGTATATGTATAC TERM 91 102344 - 102379 + r 100 -15.6 -3.92267 | opp_overlap 102343 102338, overlap 102334 102355 TCTATTATACTCAAC CCACTTCAAGATGCAG GGTT CAGCATTTTGAAGTGG TTTGGTATATGTATA Ssed_0092 102942 - 102406 - | hypothetical protein Ssed_0093 103689 - 102991 - | hypothetical protein TERM 92 103741 - 103721 - R 100 -15.5 -5.60993 | TTTGCCATAAAAAAA GGCGACAGT ATG ACTGTCGCC TTCACAAAGTGTCAA TERM 93 103762 - 103750 - R 73 -7.7 -3.85698 | TGTCGCCTTCACAAA GTGTC AAA GACAC CAAATCTTATTCCAA TERM 94 104365 - 104379 + r 90 -11.4 -3.90588 | opp_overlap 104365 TGTGATGTTAAAAAA GGTGGC TTG GCCACC TTTCATTAACAACTC TERM 95 104379 - 104365 - R 95 -11.4 -5.0538 | opp_overlap 104365 TGTGATGTTAAAAAA GGTGGC TTG GCCACC TTTCATTAACAACTC Ssed_0094 105022 - 104402 - | cytochrome c, class I Ssed_0095 105192 - 105854 + | GTPase EngB TERM 96 105888 - 105919 + T 100 -8.9 -5.93809 | opp_overlap 105918, overlap 105885 TACAGAACCGATTGA GCTTCTCATTTTA CCTTAA TGGAATGAGAAGC TTTTTTTTATCCGAA TERM 97 105952 - 105918 - T 100 -14.6 -3.54109 | opp_overlap 105888, overlap 105951 TTAATGGAATGAGAA GCTTTTTTTTATCCGA AAT TCAGACAAAAAAAAGC CGACGGCATTACCAT TERM 98 105971 - 105951 - T 100 -11.1 -6.02914 | overlap 105918 TTCAGACAAAAAAAA GCCGACGGC ATT ACCATCGGC CAAATTAGCTCTTTT TERM 99 106042 - 106016 - T 73 -9.4 -3.24423 | overlap 106011 106009 106019 TTCAACAAGACTCAA GTACCACCAAGT TAG ACTCGGTGGCTC TCAATGACGACAGCA TERM 100 106039 - 106019 - T 81 -11.9 -2.80096 | overlap 106016 106011 106009 AACAAGACTCAAGTA CCACCAAGT TAG ACTCGGTGG CTCTCAATGACGACA TERM 101 106141 - 106118 - T 100 -16.8 -5.60864 | opp_overlap 106114 TACAGACGAAAAAAA GCCCCAGCAA TAAA TTGCTGGGGC GCCATAATTTGGCTG TERM 102 106576 - 106556 - T 70 -8.2 -3.75535 | opp_overlap 106556 TCATAGAGACTGAAA CGCCCCAA AAGTG TAGGGGCG TTAGTGGGAGGGGGG Ssed_0096 109413 - 106612 - | DNA-directed DNA polymerase TERM 103 107342 - 107368 + g 80 -9.4 -4.17089 | opp_overlap 107330 107327 GCATGACGGATCCGT CGTCCCTCTTCG GTT CGAATGGGGATG TTTTGCAGGTTTGGC TERM 104 108653 - 108680 + g 78 -11.4 -3.03771 | gap 1, opp_overlap 108650 108648 108653 AGCTTCAACATATCA CCATGCTCGGCTA ATT TAGC-GGGCATGG TCTTAGAGCCTCTGA TERM 105 108762 - 108773 + g 79 -3.6 -5.24129 | CTGCGCCGGTTAACA TGGC AAGG GCCG TTTTTTCTCCGACAC TERM 106 109187 - 109157 - G 72 -10.5 -2.9914 | opp_overlap 109164 TACTCTTCATACATA TCGTTACGAAAGG TTTTT CCTTTCGCATCGA ATACAACGGCCATCT Ssed_0097 109761 - 110414 + | isoprenoid biosynthesis protein with amidotransferase-like domain TERM 107 110810 - 110856 + T 80 -8.1 -4.3586 | gap 1, opp_overlap 110838, overlap 110814 110817 TTTTCAGCCGTATTT GTAGCAGCCTAGGTTCTAGGCT CTAA AACCTCGAACCTAGGTT-CTTC TTTTGCTATCAATCA TERM 108 110814 - 110853 + T 82 -8.6 -4.29302 | opp_overlap 110838, overlap 110810 110817 CAGCCGTATTTGTAG CAGCCTAGGTTCTAGGCT CTAA AACCTCGAACCTAGGTTC TTCTTTTGCTATCAA TERM 109 110817 - 110850 + T 100 -12.5 -4.25052 | opp_overlap 110838, overlap 110814 110810 CCGTATTTGTAGCAG CCTAGGTTCTAGGCT CTAA AACCTCGAACCTAGG TTCTTCTTTTGCTAT Ssed_0098 111682 - 110846 - | rhomboid family protein Ssed_0099 112055 - 111747 - | rhodanese domain-containing protein TERM 110 112124 - 112101 - R 78 -11 -3.04322 | opp_overlap 112099 TTTAAGTGTGTAATA CGGGGCCGTA TTAG TACAGCCCCA TGCCGGATTAATCCC Ssed_0100 113157 - 112132 - | L-threonine 3-dehydrogenase TERM 111 113030 - 113054 + g 75 -3.5 -5.00846 | overlap 113031 TCCCAGTTATAGATA TGGATATCGGT ACC ACAGATAGCCG TTTTTCTGATCTTTA Ssed_0101 114387 - 113194 - | 2-amino-3-ketobutyrate coenzyme A ligase TERM 112 114673 - 114645 - R 86 -8.2 -4.8622 | gap 1, opp_overlap 114649, overlap 114647 114649 114650 TTGTCTAATCAAAAA TAGAGCGCCGGTG ATGA CACCGGCGAT-TA ATACCAATCAGTATA TERM 113 114672 - 114647 - R 83 -8.9 -4.05402 | opp_overlap 114649, overlap 114645 114649 114650 GTCTAATCAAAAATA GAGCGCCGGTG ATGA CACCGGCGATT AATACCAATCAGTAT TERM 114 114649 - 114670 + r 82 -11.5 -3.15663 | opp_overlap 114647 114645 114649 114650 CTAATCAAAAATAGA GCGCCGGTG ATGA CACCGGCGA TTAATACCAATCAGT TERM 115 114670 - 114649 - R 88 -11.5 -3.61182 | opp_overlap 114649, overlap 114647 114645 114650 CTAATCAAAAATAGA GCGCCGGTG ATGA CACCGGCGA TTAATACCAATCAGT TERM 116 114669 - 114650 - R 95 -15 -2.75624 | opp_overlap 114649, overlap 114649 114647 114645 TAATCAAAAATAGAG CGCCGGTG ATGA CACCGGCG ATTAATACCAATCAG TERM 117 114899 - 114915 + r 74 -5 -4.67353 | opp_overlap 114899, overlap 114901 TCGGATGCGCTAAAA CTCGCC TGCTT GGCGTG TTTTTGGCTGCCTAC Ssed_0102 115700 - 115044 - | TetR family transcriptional regulator Ssed_0103 116738 - 116061 - | TetR family transcriptional regulator Ssed_0104 116896 - 118164 + | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein TERM 118 118400 - 118371 - T 81 -11.5 -3.08774 | gap 1 GATAAATCGCTAACA CTTCCGATGGGGCA TCC TGCCCC-CCGAAAG TTAGCCCGACATCCA Ssed_0105 119990 - 119268 - | 3-deoxy-D-manno-octulosonic-acid kinase TERM 119 119370 - 119397 + g 71 -9.2 -3.60475 | gap 1, opp_overlap 119358 GGAGCGTAACAACCT CTCCAGGTTGGCA CCT TGCCA-CTTGGGG TTTGGCGTGCGAATT TERM 120 119715 - 119727 + g 73 -5.5 -4.57073 | TAGTGATAACTCAGC CACCG CTC TGGTG TTTTTCAGACCGGTG Ssed_0106 120943 - 120074 - | dTDP-4-dehydrorhamnose reductase Ssed_0107 122043 - 120940 - | dTDP-glucose 4,6-dehydratase Ssed_0108 122612 - 122040 - | dTDP-4-dehydrorhamnose 3,5-epimerase Ssed_0109 122793 - 123821 + | glycosyl transferase family protein Ssed_0110 123931 - 124686 + | glycosyl transferase family protein TERM 121 124727 - 124710 - f 89 -9.1 -4.78764 | opp_overlap 124710 TAAAGTTATTAAAAA GAGCCCA TTTT CGGGCTC TTTTTTTGTTATTTG TERM 122 124710 - 124727 + F 100 -8.4 -6.01369 | opp_overlap 124710 TAAAGTTATTAAAAA GAGCCC ATTTTC GGGCTC TTTTTTTGTTATTTG Ssed_0111 125110 - 125868 + | glycosyl transferase family protein TERM 123 125902 - 125925 + T 76 -9 -3.69836 | opp_overlap 125902 125904, overlap 125923 GGCTTTGATTATAGA TACCGTAAGT ACTG ATTTACGGTA TTTGAAGTTCATTAT Ssed_0112 127007 - 125937 - | glycerol dehydrogenase-like protein Ssed_0113 127427 - 127008 - | cytidyltransferase-like protein TERM 124 127972 - 127952 - g 74 -11.3 -3.02144 | TTATCTTTGGTAACA GTTTTGATG CTT CATCAAAAC TAAAAGGGATATCGA TERM 125 128009 - 127991 - g 71 -6.6 -4.24606 | overlap 127993 AAGGGATATCGAAAA CAGCGCTG ATG CAGCACGG CATCGGTCCCAAAGC Ssed_0114 127714 - 128772 + | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase Ssed_0115 128826 - 129302 + | phosphopantetheine adenylyltransferase TERM 126 129389 - 129411 + G 74 -9.8 -3.51637 | ACCTCCTTTATCTCT GTATCCGCCC CCT GGGTGGACAC TTCTGATATCTATCT TERM 127 129651 - 129629 - g 77 -4.6 -4.83722 | opp_overlap 129627 129629 129639 AATACGAGAATAAAA GCGGCGGCGG CGA CCGATGCGGC TCGTTTTCAACATTT Ssed_0116 129317 - 130810 + | hypothetical protein TERM 128 130845 - 130819 - T 100 -12.4 -4.20868 | opp_overlap 130813 130826 130827 TTTCTAAAAGAAGAA CCTAGAATCTAG GAC CTAGGTTCTAGG CGCAGCTTGCTGCAC TERM 129 130929 - 130910 - T 73 -10 -2.88663 | opp_overlap 130921 130922 130923, overlap 130922 130923 ATTTAGTCTGACATA GGCCACAA AATA CTGTGGCC CTCTGGCCCAGCTTG Ssed_0117 131714 - 130893 - | DNA-formamidopyrimidine glycosylase Ssed_0118 132255 - 131773 - | hypothetical protein TERM 130 132361 - 132385 + r 95 -13 -3.50481 | opp_overlap 132361, overlap 132354 ACCTGCAATAAAAAA GGTTGAAAGC TTTAT GCTTTCAACC TTCTGGATTTCCTTT TERM 131 132385 - 132361 - R 100 -13 -5.45652 | opp_overlap 132361 132354 ACCTGCAATAAAAAA GGTTGAAAGC TTTAT GCTTTCAACC TTCTGGATTTCCTTT Ssed_0119 133401 - 132415 - | molybdenum cofactor biosynthesis protein A TERM 132 133192 - 133211 + g 90 -7.8 -5.06414 | opp_overlap 133191 TGTGCGTACCAAAGG TTCGCCGC CGGT GAGGCGAA TTTTTCTTACACCCA TERM 133 133455 - 133420 - R 100 -14.8 -4.88067 | overlap 133422 AGCTACCTACAAAAA CACCGTAGTGGCTCAG TTAT CTGAGCCACTACAGAA AACAGTTAAACAGAG TERM 134 133453 - 133422 - R 100 -19.6 -4.06182 | overlap 133420 CTACCTACAAAAACA CCGTAGTGGCTCAG TTAT CTGAGCCACTACAG AAAACAGTTAAACAG Ssed_0120 135284 - 133479 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 135 133939 - 133927 - G 83 -9.1 -4.38712 | opp_overlap 133933 133934 GCCAGTTTGATAAAA TCGGC ATC GCCGA CGGATACACCGCCGG Ssed_0121 135889 - 135299 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 136 135505 - 135533 + g 77 -3.8 -5.06016 | gap 1, overlap 135499 135507 CAGGTTGTTCGCGCT TCCCGTCACTTGC TACT GCAAG-GTCGGCA TTTTCTTTCTCTAAT Ssed_0122 136592 - 135873 - | ABC transporter-related protein Ssed_0123 137302 - 136595 - | binding-protein-dependent transport systems inner membrane component TERM 137 137275 - 137255 - G 100 -16.9 -4.41047 | opp_overlap 137260 AGGGTCCAATGAAAA CAGCAGGCC TAA GGCCTGCTG TAAAAGGGCTAACCA Ssed_0124 138209 - 137397 - | extracellular solute-binding protein Ssed_0125 138433 - 139866 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 138 140436 - 140420 - g 74 -4.4 -4.95155 | overlap 140421 CCCAGATCACAAAAA CCGACT AAGAA AGTCGA AGACAGGGGCTTACT Ssed_0126 139868 - 141985 + | integral membrane sensor signal transduction histidine kinase TERM 139 142068 - 142048 - T 100 -8.2 -5.68039 | overlap 142049 AAATGGATAAAAAAA TGCCGGGA AATAA TCCCGGCT AAAAAGTGTGTGTGA TERM 140 142067 - 142049 - T 91 -11.7 -3.98383 | overlap 142048 AATGGATAAAAAAAT GCCGGGA AATAA TCCCGGC TAAAAAGTGTGTGTG Ssed_0127 142721 - 142251 - | acetyltransferase TERM 141 142746 - 142770 + r 75 -10 -3.23393 | opp_overlap 142748, overlap 142744 142748 ATCTCTCTGTAAAAA AAGGCAGCAG ATGAG CTGCTGCCTA TATTATAAGCTGGCA TERM 142 142748 - 142768 + r 85 -12.6 -3.18118 | opp_overlap 142748, overlap 142746 142744 CTCTCTGTAAAAAAA GGCAGCAG ATGAG CTGCTGCC TATATTATAAGCTGG TERM 143 142768 - 142748 - R 100 -12.6 -5.40072 | opp_overlap 142748 142746 142744 CTCTCTGTAAAAAAA GGCAGCAG ATGAG CTGCTGCC TATATTATAAGCTGG Ssed_0128 143499 - 142834 - | hypothetical protein Ssed_0129 143796 - 144581 + | hypothetical protein Ssed_0130 145931 - 144687 - | isochorismate synthase TERM 144 145538 - 145565 + g 74 -10 -3.58199 | overlap 145529 TTGGTGGGGAGAGTG GACTTGGGAAAA CCAG TTTTGCCAAGTC TTCTATCGCTTTGGT TERM 145 145974 - 145991 + H 77 -6.3 -4.62475 | opp_overlap 145966 GATAGGATCACTGTG CGACTGA AATT TCAGTTG TTTTAGTTTGTCAGT Ssed_0131 146463 - 148496 + | TonB-dependent receptor, plug TERM 146 148549 - 148602 + F 74 -9.1 -3.48822 | ACGGTGTTGGAACAA GTTAACTCTCATTATCAAATGGATA GGTT TGTCTGTGTGATGATGGGAGTTGGC TTCTAGCTTGTTATA TERM 147 149255 - 149269 + G 71 -5 -4.62471 | CCCTGCGGCTTTCAG TGATCT TGT GGATCA TTTTTGGCAATTAAA TERM 148 149372 - 149383 + G 75 -5.8 -4.49716 | overlap 149340 149339 TGGGGAAAGTGTACT GGCT TTCG AGCC TTTTGAATTTTGTTT Ssed_0132 148659 - 150035 + | ABC transporter related Ssed_0133 150025 - 150717 + | cobalt transport protein Ssed_0134 150785 - 151330 + | hypothetical protein Ssed_0135 151331 - 152086 + | hypothetical protein Ssed_0136 152092 - 152310 + | hypothetical protein Ssed_0137 152571 - 153749 + | HD domain-containing protein Ssed_0138 153896 - 154564 + | paraquat-inducible protein A TERM 149 154611 - 154630 + T 90 -10.8 -4.17296 | overlap 154602 TAGCGACAGGCGCTG GAGATCAC GTCT GTGATCTC TTTCTCTATCTGGGG Ssed_0139 157789 - 154595 - | histidine kinase Ssed_0140 158116 - 158796 + | ThiJ/PfpI domain-containing protein TERM 150 159076 - 159086 + T 75 -8.2 -3.9712 | opp_overlap 159076 159075 159072 GATGTTTAAAACAAG GGGC AAA GCCC TTTATGCTGCACTGG TERM 151 159346 - 159311 - T 83 -12.2 -3.2218 | gap 1, overlap 159312 CTTAAGAGTTATGAA TGCCTGACATGCTAAAA CAG TTTTAGCATGTCAGA-A GAGAGGCTCCCCGTG TERM 152 159346 - 159312 - T 91 -13.8 -2.52987 | overlap 159311 TTAAGAGTTATGAAT GCCTGACATGCTAAAA CAG TTTTAGCATGTCAGAA GAGAGGCTCCCCGTG Ssed_0141 160315 - 159371 - | hypothetical protein TERM 153 159971 - 159981 + g 74 -6.8 -4.3467 | opp_overlap 159970, overlap 159960 CGTACCTGCAGAGAT CAGG TGT CCTG TTTTGGTGTCGAACT Ssed_0142 161845 - 160490 - | glutathione reductase TERM 154 161975 - 161920 - R 78 -10.6 -2.94218 | opp_overlap 161924, overlap 161922 161924 ATGTCTCAGTACAGA TATACCCAAGCTACTTCAAAATGCTG AATC CTACATTTCGAGGTCGTTTGGGTATA ATAACCTTAAGTGGC Ssed_0143 162545 - 162024 - | hypothetical protein TERM 155 162587 - 162609 + r 83 -10.7 -3.70076 | opp_overlap 162592, overlap 162592 ATTAAAAGCTATTTG CCAAAGACA CTCCC TGTCTTTGG TTTAGGTAAATTTAG Ssed_0144 163441 - 162665 - | hypothetical protein Ssed_0145 163745 - 165784 + | oligopeptidase A TERM 156 165910 - 165880 - T 81 -6.9 -4.7497 | opp_overlap 165883, overlap 165881 165883 CTGACCTAGTAAAAA TTATGCCAATTGG TTCTG CCAATTGGCATTT TTGTACCGTCTTCGC TERM 157 165909 - 165881 - T 79 -10.4 -3.445 | opp_overlap 165883, overlap 165880 165883 TGACCTAGTAAAAAT TATGCCAATTGG TTCTG CCAATTGGCATT TTTGTACCGTCTTCG TERM 158 165883 - 165907 + T 100 -13.7 -4.87273 | opp_overlap 165881 165880 165883 ACCTAGTAAAAATTA TGCCAATTGGT TCT GCCAATTGGCA TTTTTGTACCGTCTT TERM 159 165907 - 165883 - T 93 -13 -3.28873 | opp_overlap 165883, overlap 165881 165880 ACCTAGTAAAAATTA TGCCAATTGG TTCTG CCAATTGGCA TTTTTGTACCGTCTT Ssed_0146 166345 - 165926 - | hypothetical protein Ssed_0147 166663 - 167193 + | hypothetical protein Ssed_0148 167898 - 167248 - | glutathione S-transferase domain-containing protein Ssed_0149 168977 - 168072 - | LyrR family transcriptional regulator Ssed_0150 169192 - 169881 + | 3-methyladenine DNA glycosylase TERM 160 170051 - 170027 - T 100 -8.5 -6.09888 | overlap 170028 TTTGAATAAAAAAAA GCGCCAGCC TGGAGTG GGCTGGCGA AAGATTGCTGAGATA TERM 161 170050 - 170028 - T 95 -12 -4.24306 | overlap 170027 TTGAATAAAAAAAAG CGCCAGCC TGGAGTG GGCTGGCG AAAGATTGCTGAGAT Ssed_0151 170910 - 170152 - | hypothetical protein TERM 162 171797 - 171769 - g 73 -10.3 -3.24902 | CAAGACTATGATGAA GCCGATGCCGCTT ACA AAGCAGCATTAGC AAGAGTTACAGTTGC Ssed_0152 171346 - 172503 + | RND family efflux transporter MFP subunit TERM 163 174457 - 174471 + G 70 -7.8 -3.87815 | CAATCGGTCGCTGGG CGTGCC ATG GGCATG TTTATGCAGATGAAA Ssed_0153 172513 - 175665 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 164 175711 - 175694 - T 100 -14.1 -3.63968 | opp_overlap 175694 TCTTAAATTTTCAAA GCCCGGC GATT GCCGGGC TTTTTGTTAGGCTTT TERM 165 175694 - 175711 + T 100 -14.1 -5.11112 | opp_overlap 175694 TCTTAAATTTTCAAA GCCCGGC GATT GCCGGGC TTTTTGTTAGGCTTT Ssed_0154 176479 - 175802 - | glutathione S-transferase domain-containing protein TERM 166 177443 - 177453 + G 77 -4 -5.0133 | opp_overlap 177418 177443 TGGCGAGCAAAATAT TCAT ATT ATGA TTTTTTGCCCCACTG Ssed_0155 176652 - 177554 + | MscS mechanosensitive ion channel TERM 167 177593 - 177631 + T 86 -7.2 -5.10968 | opp_overlap 177596, overlap 177595 177596 ATATTTAAAATATGT AAAGGCGCAGCACAGGGG AGC CCCAATTGCTGCGCCATA TTTTTATCTCTTCAT TERM 168 177595 - 177629 + T 89 -9.8 -4.16832 | opp_overlap 177596, overlap 177593 177596 ATTTAAAATATGTAA AGGCGCAGCACAGGGG AGC CCCAATTGCTGCGCCA TATTTTTATCTCTTC TERM 169 177628 - 177596 - T 100 -13.3 -3.85184 | opp_overlap 177596 177595 177593 TTTAAAATATGTAAA GGCGCAGCACAGGGG AGC CCCAATTGCTGCGCC ATATTTTTATCTCTT TERM 170 177596 - 177628 + T 91 -13.3 -3.08472 | opp_overlap 177596, overlap 177595 177593 TTTAAAATATGTAAA GGCGCAGCACAGGGG AGC CCCAATTGCTGCGCC ATATTTTTATCTCTT Ssed_0156 179263 - 177647 - | AbgT putative transporter TERM 171 179206 - 179190 - G 70 -2.1 -4.90918 | overlap 179193 AGAAAACGAACAAAA GCACCAC TCT GCGGCCC TGATGCTCCCGGTGA TERM 172 179535 - 179514 - H 93 -8 -5.47821 | ATTCAGGCAAAAAAA TGACCCCA TAAAAG TGGGGCCA AAAGGGATAGGGTTG TERM 173 179703 - 179684 - H 93 -7.9 -5.50499 | TTACAGGCAAAAAAA TAGGCTC AAACTA GAGCCTA AAAAGGATGTACAAC TERM 174 180046 - 180064 + H 72 -3.2 -5.14626 | overlap 180042 180049 AAGTAAGGTTTTTTA TCTTAAAT TAA ATTTATGA TTTTATTTTAGTAGT Ssed_0157 180321 - 180890 + | LemA family protein Ssed_0158 180949 - 181959 + | hypothetical protein Ssed_0159 181968 - 182705 + | lytic transglycosylase, catalytic Ssed_0160 184274 - 182868 - | multidrug efflux pump VmrA TERM 175 183610 - 183595 - G 77 -4.6 -4.88918 | overlap 183597 183598 TTAGTCGAAAGAAAA TAGGCG AAGC CGCCAA CACAAACTGACAGCT TERM 176 183608 - 183597 - G 71 -7.2 -4.06281 | overlap 183595 183598 AGTCGAAAGAAAATA GGCG AAGC CGCC AACACAAACTGACAG TERM 177 184357 - 184375 + H 77 -9.6 -3.58766 | GATTAAAGTTGATAC CTATCCGA ATT TCGGATGG TTGTCTCATATGGTT Ssed_0161 184437 - 185330 + | putative transcriptional regulator Ssed_0162 185416 - 185787 + | hypothetical protein TERM 178 185840 - 185822 - T 100 -12.4 -5.1356 | opp_overlap 185822, overlap 185837 TGGTATTAATAAAAA GAGCCGGC AAA GCCAGCTC TTTTTAGCGCGAACA TERM 179 185822 - 185840 + T 91 -10.2 -4.56597 | opp_overlap 185822 185837 TGGTATTAATAAAAA GAGCCGGC AAA GCCAGCTC TTTTTAGCGCGAACA Ssed_0163 186738 - 185896 - | hypothetical protein Ssed_0164 186935 - 187711 + | hypothetical protein TERM 180 187695 - 187731 + T 76 -7.3 -4.30844 | opp_overlap 187705, overlap 187687 187698 ATGTGTACGTTAAGG CGGCTATGAAGGCTTAA CGC TTATGCCTTCATCGGTG TTTTACTGCTGAGAT TERM 181 187698 - 187728 + T 71 -9.8 -2.84962 | opp_overlap 187705, overlap 187687 187695 TGTACGTTAAGGCGG CTATGAAGGCTTAA CGC TTATGCCTTCATCG GTGTTTTACTGCTGA Ssed_0165 188101 - 187715 - | hypothetical protein TERM 182 188211 - 188236 + r 75 -10.5 -3.15996 | opp_overlap 188216, overlap 188216 CTTGCGGACAATACA AAAAAGGAGCC TGAT GGCTCCTTTTG TATTGGTAAGTAGTG TERM 183 188231 - 188216 - R 100 -10.4 -5.5208 | opp_overlap 188211 188216 GGACAATACAAAAAA GGAGCC TGAT GGCTCC TTTTGTATTGGTAAG TERM 184 188216 - 188231 + r 93 -10.4 -4.70583 | opp_overlap 188216, overlap 188211 GGACAATACAAAAAA GGAGCC TGAT GGCTCC TTTTGTATTGGTAAG Ssed_0166 189107 - 188256 - | hypothetical protein TERM 185 188341 - 188367 + g 73 -2.2 -5.10461 | overlap 188344 188345 GAGGTGCGATCAATA TATTCTGTTGCG AAG TGCAGCAGGTTG TTTTTATTGGCTAGA TERM 186 188344 - 188364 + g 75 -6.1 -4.64495 | overlap 188341 188345 GTGCGATCAATATAT TCTGTTGCG AAG TGCAGCAGG TTGTTTTTATTGGCT TERM 187 189198 - 189219 + r 73 -6.7 -4.28375 | opp_overlap 189177 ATCAGAAATGATCCG GCGAAAATT ACCA AATTTTTGC TTTTGACTGTCTTCG Ssed_0167 190611 - 189301 - | osmolarity sensor protein Ssed_0168 191397 - 190672 - | osmolarity response regulator Ssed_0169 191966 - 191748 - | hypothetical protein TERM 188 192124 - 192103 - H 74 -5.1 -4.7373 | TTATTTGAGCAAAAA GAGGCAAGC CCGG GCTTATCTC TAAGTCATCACAGGT Ssed_0170 192343 - 192834 + | transcription elongation factor GreB TERM 189 193764 - 193775 + G 75 -5.8 -4.5187 | overlap 193761 GTCAAAGCTCAAGCT GGCT AACA AGCC TTTGGTTTTTTTGGG Ssed_0171 193063 - 194862 + | thiamine pyrophosphate binding domain-containing protein Ssed_0172 195071 - 195442 + | hypothetical protein TERM 190 195476 - 195458 - f 77 -10.2 -3.28712 | opp_overlap 195459, overlap 195459 TTCCCCTTCGGAGAA GGCCCGCA TCC TGCGGGCT TTTTTGTTCACACCG TERM 191 195475 - 195459 - f 91 -13.7 -2.57132 | opp_overlap 195459, overlap 195458 TCCCCTTCGGAGAAG GCCCGCA TCC TGCGGGC TTTTTTGTTCACACC TERM 192 195459 - 195475 + F 100 -13.7 -5.4505 | opp_overlap 195458 195459 TCCCCTTCGGAGAAG GCCCGCA TCC TGCGGGC TTTTTTGTTCACACC TERM 193 197828 - 197810 - g 74 -3.8 -4.8622 | overlap 197811 CGTTCTAACCAAAAA TCTCAGAC AGG GTCTAAGC CTGCTGCTAAATCGA Ssed_0173 195536 - 197950 + | RNA-binding S1 domain-containing protein TERM 194 198028 - 198003 - f 100 -16.3 -3.31792 | opp_overlap 198003 TGATTACTTTGAGAA TGTCGAATGGG ATAT CCCATTCGACA TTTTTTTTACTTTAC TERM 195 198003 - 198028 + F 100 -16.3 -6.02546 | opp_overlap 198003 TGATTACTTTGAGAA TGTCGAATGGG ATAT CCCATTCGACA TTTTTTTTACTTTAC TERM 196 198331 - 198348 + G 75 -3.4 -5.0432 | CTCGCTTTTCTATTT TGGGTC CATTTA GATCCA TTTTATGTTTTTGTT Ssed_0174 198309 - 200321 + | sulfatase TERM 197 200334 - 200358 + T 79 -10.8 -3.21218 | TAAGTGCGGATATGG CAGGCTCATC ATGTG GATGAGTCTG TTGCTGATAAAAACT Ssed_0175 200817 - 200314 - | hypothetical protein Ssed_0176 201672 - 200878 - | carboxylesterase Ssed_0177 201710 - 202510 + | competence protein ComF Ssed_0178 205069 - 202523 - | peptidase M14, carboxypeptidase A TERM 198 203218 - 203237 + g 71 -7.2 -4.02132 | gap 1 ATGCATCAGTTCCTT GCC-CTGTT ACT AACAGAGGC TTTATCGGTTTAACA TERM 199 203572 - 203587 + g 77 -3.9 -5.1101 | overlap 203548 CATCGACGTTGAAGG CGGTC GGTTTA GGCCG TTTTTTAGATAATAC TERM 200 203881 - 203911 + g 100 -12.6 -4.24887 | opp_overlap 203893 GATTTGCATTAGCGG GGGCGCCAATAAGG AAG CCTTGTTGACGTCC TTTGTTCAGTGTCTT Ssed_0179 205299 - 205877 + | putative DNA uptake protein TERM 201 205950 - 205926 - T 100 -7.1 -5.84381 | opp_overlap 205926 GGATTAATAAAAAAA GCGAGTTGGTT ATT AGCCAATTCGC TTTTTTAATGTCTGC TERM 202 205926 - 205950 + T 100 -11.5 -5.24989 | opp_overlap 205926 GGATTAATAAAAAAA GCGAGTTGGTT ATT AGCCAATTCGC TTTTTTAATGTCTGC Ssed_0180 207707 - 206370 - | MATE efflux family protein Ssed_0181 207731 - 208792 + | polysaccharide deacetylase Ssed_0182 209857 - 208820 - | protein-glutamate methylesterase Ssed_0183 210803 - 209961 - | protein-glutamate O-methyltransferase TERM 203 210738 - 210754 + g 74 -2.9 -5.14563 | GTGTTTCTTCCTTTC CGGCAGT ACG ATTCCCG TTTTTTCATAGGCAA Ssed_0184 213436 - 210845 - | methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor Ssed_0185 214011 - 213460 - | CheW protein Ssed_0186 216129 - 214063 - | CheA signal transduction histidine kinase Ssed_0187 216537 - 216175 - | response regulator receiver protein Ssed_0188 216830 - 216534 - | hypothetical protein TERM 204 217003 - 217015 + r 100 -7.7 -5.76237 | TCCAGATGTATTTAT TGGGT TTC ACCCA TTTTTTCTTTGTATG Ssed_0189 217665 - 217009 - | electron transport protein SCO1/SenC Ssed_0190 218634 - 217720 - | protoheme IX farnesyltransferase Ssed_0191 219698 - 218712 - | cytochrome oxidase assembly Ssed_0192 220243 - 219698 - | hypothetical protein TERM 205 219935 - 219950 + g 73 -3.2 -4.84311 | opp_overlap 219935 TTCGGTGAGTAAAAT CATGGT GTGA ACCCTG TTTTGTTCTCTGCCC Ssed_0193 221202 - 220444 - | hypothetical protein TERM 206 220950 - 220926 - G 78 -5.6 -4.9218 | opp_overlap 220927, overlap 220927 TATCGAGTAGAAAAA CCTGCTCAGC GAGCG GCTGTGCAGT TACTGTGAGTCGGTA TERM 207 220949 - 220927 - G 71 -9.1 -3.54585 | opp_overlap 220927, overlap 220926 ATCGAGTAGAAAAAC CTGCTCAGC GAGCG GCTGTGCAG TTACTGTGAGTCGGT Ssed_0194 221213 - 221398 + | hypothetical protein TERM 208 221445 - 221429 - T 84 -7.9 -4.71426 | overlap 221430 TCCTCACCAATAAAA TGGCCAC GTA GTGGCCC ACATAGAGATGCGCA TERM 209 221444 - 221430 - T 85 -11.4 -3.42374 | overlap 221429 CCTCACCAATAAAAT GGCCAC GTA GTGGCC CACATAGAGATGCGC Ssed_0195 222345 - 221470 - | cytochrome c oxidase, subunit III Ssed_0196 222911 - 222342 - | cytochrome C oxidase assembly protein Ssed_0197 224518 - 222914 - | cytochrome-c oxidase Ssed_0198 226102 - 224528 - | cytochrome-c oxidase TERM 210 226492 - 226476 - R 100 -10.1 -5.28176 | opp_overlap 226474 TTCAGGCACAAAAAA GCCCCTC TCG AAGGGGC CGTAATGTAAAGCAA Ssed_0199 227033 - 226521 - | hypothetical protein Ssed_0200 227650 - 227030 - | LexA repressor TERM 211 227140 - 227155 + g 100 -4.7 -5.75342 | CGTTTTCGGCATGTA GGTAG ACGATG CTACC TTTTTTTTCAAAACG TERM 212 228381 - 228395 + G 76 -10 -3.71672 | opp_overlap 228378, overlap 228378 TAGCCCAGAAACTGG CTCGAG TGG CTCGAG TTCATTTTAGTCGAC TERM 213 230171 - 230189 + G 73 -9.6 -3.38768 | overlap 230154 AATGGATTGCTCCGT TCGTCTGT CAG GCAGACGA TTGTCGATAGTGTGA Ssed_0201 227801 - 230224 + | glycerol-3-phosphate acyltransferase Ssed_0202 230224 - 231480 + | aromatic amino acid transporter TERM 214 231530 - 231502 - T 91 -13.3 -3.21703 | opp_overlap 231509, overlap 231507 231509 AAATCGAAAGATAGA TAAAATAGCCCTC GAT GAGGGCTTTTTTA TGCCTGAGGTTAACC TERM 215 231525 - 231507 - T 88 -8.8 -4.70534 | opp_overlap 231509, overlap 231502 231509 GAAAGATAGATAAAA TAGCCCTC GAT GAGGGCTT TTTTATGCCTGAGGT TERM 216 231509 - 231523 + T 100 -11.4 -5.28176 | opp_overlap 231507 231502 231509 AAGATAGATAAAATA GCCCTC GAT GAGGGC TTTTTTATGCCTGAG TERM 217 231523 - 231509 - T 90 -11.4 -3.94184 | opp_overlap 231509, overlap 231507 231502 AAGATAGATAAAATA GCCCTC GAT GAGGGC TTTTTTATGCCTGAG Ssed_0203 232576 - 231551 - | AraC-type transcriptional regulator Ssed_0204 232705 - 233040 + | major facilitator superfamily permease Ssed_0205 233033 - 234256 + | putative multidrug resistance efflux pump Ssed_0206 235505 - 234315 - | GGDEF domain-containing protein TERM 218 234618 - 234596 - G 83 -8.4 -4.56597 | opp_overlap 234596, overlap 234600 CCTTGCGGGGAAAAA CGATGGTGAA CTC TTCACCGCCG TATCTGAATACTTTG TERM 219 235464 - 235450 - G 71 -2.8 -4.87893 | AAGCCTAATGAAAAA GCTG TGACTAG CAGC GGAAGAAAGAAATAG Ssed_0207 236098 - 235685 - | globin TERM 220 235939 - 235950 + g 73 -2.2 -5.1485 | ACATTGACATCAGCT TGCG CCCC TGCA TTTTTATATTGCTTC TERM 221 236304 - 236318 + H 71 -7.1 -3.87815 | GTTGTTTCTATTTAT CAGCC AAAGG GGCTG TTTATGAAAGTCGAA TERM 222 237068 - 237080 + G 75 -3.3 -5.06505 | opp_overlap 237068, overlap 237069 237072 TGCCGTTATCAATGA TCCTC AGG GAGGC TTTTTCTCTGTGATT Ssed_0208 236322 - 237110 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 223 237302 - 237313 + G 85 -5.8 -5.1244 | overlap 237291 237300 GGCGTGCTGCTCATT GCTG GCAG CAGC TTTTTCTATTACTCC Ssed_0209 237230 - 239263 + | methyl-accepting chemotaxis sensory transducer TERM 224 239305 - 239272 - T 100 -13.3 -4.00066 | opp_overlap 239277, overlap 239277 TTTATAACTGATAAA TAAAAGCACAGCCCA CCAG TGGACTGTGCTTTTT TAATGATGGCTTATA TERM 225 239300 - 239277 - T 100 -13.2 -5.01553 | opp_overlap 239277, overlap 239272 AACTGATAAATAAAA GCACAGCCCA CCAG TGGACTGTGC TTTTTTAATGATGGC TERM 226 239277 - 239300 + T 100 -11 -5.1861 | opp_overlap 239272 239277 AACTGATAAATAAAA GCACAGCCCA CCAG TGGACTGTGC TTTTTTAATGATGGC Ssed_0210 242468 - 239331 - | CzcA family heavy metal efflux protein TERM 227 240977 - 240964 - G 74 -6.7 -4.3255 | CCTCGAATGAAGAAA CCCAT CAGA ATGGG CACTAAGGTTATCGA TERM 228 241532 - 241548 + g 76 -9.5 -3.67 | overlap 241530 241535 CCGGGAGACCGGCCT TAAGCTG TTC CAGCTTA TCTTTTACCGCTTCG Ssed_0211 244552 - 242600 - | membrane-fusion protein-like protein TERM 229 243222 - 243240 + g 75 -6 -4.63218 | GTTTTCTTAGATTTG GCCAGA GCCTTTA TCTGGC TTTTGTTAAAGCCGA Ssed_0212 245153 - 244575 - | hypothetical protein Ssed_0213 245819 - 245418 - | hypothetical protein TERM 230 245708 - 245737 + g 72 -10.9 -2.59458 | overlap 245703 CATCTCCCATACTCA TCATGTCTGAATC GTGT GATTCAGACATCA TAGCTTCATGTGCTT Ssed_0214 246410 - 245985 - | hypothetical protein Ssed_0215 247095 - 246604 - | hypothetical protein TERM 231 246859 - 246873 + g 73 -10 -3.42147 | ATCACAGTCTTGCTG GCCATG TGT CATGGC TTGGTCTTCGTTCGC Ssed_0216 247524 - 248087 + | tetraheme cytochrome c TERM 232 248147 - 248168 + T 100 -12.3 -5.28176 | opp_overlap 248147 TTGTGTGACTAAGAA GCCTCGTTG TTAT CAACGGGGC TTTTTTGTACATGGA TERM 233 248168 - 248147 - T 80 -10.1 -3.71848 | opp_overlap 248147 TTGTGTGACTAAGAA GCCTCGTTG TTAT CAACGGGGC TTTTTTGTACATGGA Ssed_0217 249012 - 248722 - | hypothetical protein Ssed_0218 249656 - 249075 - | putative methyltransferase TERM 234 249147 - 249166 + g 70 -7.8 -3.86311 | overlap 249148 CTGAACCCAATCGCT TGGCACGG CTAG CTGTGCCG TTTCACTTTCGGTCT TERM 235 249882 - 249902 + H 72 -3.3 -5.00884 | opp_overlap 249868 ATGTGCACCAAAAAT GAGTTCA GCTTATG TGAGCTC TTTTTTGGGAACACT Ssed_0219 250086 - 251708 + | signal recognition particle-docking protein FtsY TERM 236 252044 - 252060 + G 73 -5.1 -4.63527 | GATAATGTCGCCCTG CCTTTGG TGA TCGAAGG TTTTTCCCATGGTGA Ssed_0220 251738 - 252430 + | cell division ATP-binding protein FtsE Ssed_0221 252433 - 253398 + | hypothetical protein Ssed_0222 253663 - 254520 + | RNA polymerase factor sigma-32 TERM 237 254566 - 254543 - T 77 -8.2 -4.254 | opp_overlap 254548, overlap 254548 CTAAGATCGAATAAA TAAAACCTGC TACG GCAGGTTTTT TTGTATATGGATATA TERM 238 254561 - 254548 - T 88 -8.1 -5.10665 | opp_overlap 254548, overlap 254543 ATCGAATAAATAAAA CCTGC TACG GCAGG TTTTTTTGTATATGG TERM 239 254548 - 254561 + T 100 -8.1 -5.76633 | opp_overlap 254548 254543 ATCGAATAAATAAAA CCTGC TACG GCAGG TTTTTTTGTATATGG Ssed_0223 256462 - 254948 - | O-succinylbenzoate-CoA ligase Ssed_0224 257527 - 256472 - | O-succinylbenzoate synthase TERM 240 256681 - 256693 + g 74 -4.1 -4.93318 | CTCCTGAATGCTCGG CTTCG GCT TGAAG TTTTTGTAACTTCTC Ssed_0225 258306 - 257524 - | alpha/beta hydrolase fold Ssed_0226 260015 - 258306 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 241 259156 - 259178 + g 70 -7.6 -3.79787 | opp_overlap 259145, overlap 259166 ACCAGCACAGATTCA GCCTGGGC CAGCAAA GCCCTGGC TTTGGGTTGGTGTAG Ssed_0227 260780 - 261730 + | cytochrome c family protein TERM 242 262037 - 262017 - g 71 -6.7 -4.2558 | overlap 262020 262022 TATCCGTTATCAAAA TGAGACCGG GTA CCGGGCACA AATTCAAGCTCACCA Ssed_0228 261745 - 263754 + | outer membrane protein TERM 243 265188 - 265167 - g 71 -8.7 -3.62591 | opp_overlap 265178 TTCATAACGGCGAAA CCATGACTG CACG CAGCCACGG CGTTCGTGGTACCGA TERM 244 266113 - 266137 + G 71 -8.5 -3.76952 | overlap 266104 CGTTAAGGTGCGTAT CACTCCACGTG TCG CACCTGGTGTG TTTGCGTTGGGTCAG Ssed_0229 263789 - 266305 + | anaerobic dimethyl sulfoxide reductase subunit A Ssed_0230 266320 - 266997 + | anaerobic dimethyl sulfoxide reductase, B subunit TERM 245 267033 - 267050 + F 100 -14.1 -4.20552 | overlap 267028 TATTGAACCGTGTCA GGCGCCC ATCA GGGCGCC TTTAATTTGTATATT TERM 246 267357 - 267339 - g 71 -8.8 -3.65046 | overlap 267346 TTCGGACCCGAAGAA CCCAAAGC CAT GCCCTGGG GCTCGGTATACCTGG Ssed_0231 267075 - 267734 + | cytoplasmic chaperone TorD family protein Ssed_0232 267775 - 268251 + | hypothetical protein Ssed_0233 269031 - 268291 - | hypothetical protein Ssed_0234 269290 - 269898 + | DsbA family thiol:disulfide interchange protein Ssed_0235 269907 - 270542 + | disulfide bond formation protein TERM 247 270544 - 270569 + F 79 -10.5 -3.60798 | opp_overlap 270543, overlap 270540 TTAAGGCTCACTAAC CTCGATTCTTC AATA GAAGCATCGAG TTAATTTATAAAAAT Ssed_0236 270603 - 271346 + | hypothetical protein TERM 248 271910 - 271920 + G 75 -5.4 -4.82901 | opp_overlap 271910, overlap 271901 CGTAGGCTGGGATAA CTAC CCG GTAG TTTTTGTGACCGACA Ssed_0237 271380 - 273083 + | arylsulfate sulfotransferase TERM 249 273135 - 273102 - f 83 -9.8 -3.92602 | gap 2, opp_overlap 273101 273099 273103 273106, overlap 273106 273110 GTAAGATGCTATAAA CTTATCAAGCCTCTGC TATG GCAGAGGCTTGAT--G CTATCTTTATCCGAA TERM 250 273103 - 273136 + F 100 -14.7 -3.33798 | opp_overlap 273102 273106 273110, overlap 273101 273099 273106 TAAGATGCTATAAAC TTATCAAGCCTCTGC TATG GCAGAGGCTTGATGC TATCTTTATCCGAAT TERM 251 273106 - 273133 + F 100 -18.6 -2.83519 | opp_overlap 273102 273106 273110, overlap 273103 273101 273099 GATGCTATAAACTTA TCAAGCCTCTGC TATG GCAGAGGCTTGA TGCTATCTTTATCCG TERM 252 273133 - 273106 - f 100 -18.6 -2.7083 | opp_overlap 273106 273103 273101 273099, overlap 273102 273110 GATGCTATAAACTTA TCAAGCCTCTGC TATG GCAGAGGCTTGA TGCTATCTTTATCCG TERM 253 273129 - 273110 - f 93 -13.6 -3.26546 | opp_overlap 273106 273103 273101 273099, overlap 273106 273102 CTATAAACTTATCAA GCCTCTGC TATG GCAGAGGC TTGATGCTATCTTTA TERM 254 273159 - 273179 + F 70 -9.1 -3.19657 | overlap 273162 ATCCGAATATTTGCC GGATGACTA AGT TAGTCATTC TTAAGTGTCTATTAT TERM 255 274422 - 274438 + G 78 -12.3 -2.57931 | opp_overlap 274420 274421, overlap 274421 CCATTTTTCGAAAGC CCCTGAG CTA CTCAGGG CTTATCGAGAATCGA Ssed_0238 273869 - 274867 + | transcriptional regulator-like protein Ssed_0239 276050 - 275085 - | LysR family transcriptional regulator TERM 256 275135 - 275150 + g 70 -7.6 -3.94868 | opp_overlap 275130, overlap 275129 GAGTCGATAACCATT GCAGAT TAGG ATCTGC TTTGGCTTTATTGTA TERM 257 276364 - 276406 + H 93 -10.9 -4.95167 | opp_overlap 276367 276374 276390, overlap 276367 276400 GCTTGATGTTTTGTG AAATTTCAAATGCTGAAAT ATACA AATTCAGCATTTGAAATTG TTTTCTTGTTAATTG TERM 258 276403 - 276367 - H 90 -12.6 -3.53444 | opp_overlap 276367 276364 276400, overlap 276374 276390 TGATGTTTTGTGAAA TTTCAAATGCTGAAAT ATACA AATTCAGCATTTGAAA TTGTTTTCTTGTTAA TERM 259 276367 - 276403 + H 100 -12.6 -4.54297 | opp_overlap 276367 276374 276390, overlap 276364 276400 TGATGTTTTGTGAAA TTTCAAATGCTGAAAT ATACA AATTCAGCATTTGAAA TTGTTTTCTTGTTAA Ssed_0240 276582 - 277082 + | hypothetical protein TERM 260 277077 - 277067 - f 75 -8.2 -3.96892 | AAGTCTTATCAGAAA CGGC TTG GCCG CATAGCACTAATTGA Ssed_0241 277170 - 277643 + | hypothetical protein TERM 261 277688 - 277667 - g 71 -3.1 -4.89009 | gap 1, overlap 277672 277677 ATACCCAATGAAAAA CTCAAG-AAG ACT CTTCCTTAAG AGCGCGTGTGCCGTT Ssed_0242 277659 - 278336 + | twin-arginine translocation pathway signal Ssed_0243 278333 - 279274 + | polysulphide reductase, NrfD TERM 262 279413 - 279432 + G 78 -9.2 -4.11216 | TGCCATGAGGACGGG GCCCCCTC GGAC GATGGGGC TTTTGAAAATGAAGC Ssed_0244 279296 - 279586 + | hypothetical protein TERM 263 279602 - 279624 + T 88 -7.7 -5.01553 | TTTGTTTAATGGTTT GCCACCC GCTAGTTTG GGGTGGC TTTTCTTTCTAGATT Ssed_0245 279826 - 279689 - | AsnC family transcriptional regulator TERM 264 280085 - 280066 - H 74 -6.4 -4.36262 | gap 1, opp_overlap 280075 280076 ATAGGGATATTAAAA GGGATG-CG ACC CGACACCCC TGAGAGGTGTTGGCT TERM 265 280075 - 280099 + H 74 -6.3 -4.46233 | opp_overlap 280066, overlap 280076 TTAAAAGGGATGCGA CCCGACACCCC TGA GAGGTGTTGGC TTTCTTTGAGATTGA TERM 266 280076 - 280098 + H 75 -9.8 -3.27017 | opp_overlap 280066, overlap 280075 TAAAAGGGATGCGAC CCGACACCCC TGA GAGGTGTTGG CTTTCTTTGAGATTG TERM 267 280333 - 280344 + G 83 -4.4 -5.5208 | ATTTTGCGGCAGATT CTCT CGAC AGAG TTTTTTATATTCTGG Ssed_0246 280092 - 280697 + | methyltransferase type 11 Ssed_0247 281210 - 280758 - | hypothetical protein TERM 268 281167 - 281190 + g 79 -2.4 -5.37593 | overlap 281158 281169 TCTTCCGGCGTCACG GCTTGTGAGT GTGA ACTCAGAAAC TTTTTTAATTTCGCA Ssed_0248 281913 - 281329 - | hypothetical protein TERM 269 281883 - 281896 + g 70 -2.3 -5.00616 | ATAAATCCGAATATT GCGAG CATT CTAGC TTTTTTAACAAAAAC Ssed_0249 282032 - 282748 + | hypothetical protein TERM 270 282786 - 282756 - f 93 -12.7 -3.92592 | gap 1, opp_overlap 282759, overlap 282759 AGGCTTAACATCAAA GACGTTCCCAGGCA TTAG CGCCTGGGAAC-TC AATTCCCCGGAGTAG TERM 271 282784 - 282759 - f 95 -15.5 -2.72568 | opp_overlap 282759, overlap 282756 CTTAACATCAAAGAC GTTCCCAGGCA TTAG CGCCTGGGAAC TCAATTCCCCGGAGT TERM 272 282759 - 282784 + F 95 -14.8 -2.52543 | opp_overlap 282759 282756 CTTAACATCAAAGAC GTTCCCAGGC ATTAGC GCCTGGGAAC TCAATTCCCCGGAGT TERM 273 283472 - 283482 + G 71 -8.2 -3.78793 | TGCGCTCTATGAATC GGGC GTG GCCC TTATTCATGGTTATA Ssed_0250 282807 - 284225 + | Sel1 domain-containing protein Ssed_0251 284323 - 285573 + | hypothetical protein TERM 274 285680 - 285649 - T 75 -10.2 -3.05775 | opp_overlap 285656, overlap 285656 ATGACTCCCTAAAAC GAAAAAACGCCTGC CGAG GCAAGCGTTTCTAC TAGTCACGAGTTAAT TERM 275 285673 - 285656 - T 95 -9.1 -5.46698 | opp_overlap 285656, overlap 285649 CCTAAAACGAAAAAA CGCCTGC CGAG GCAAGCG TTTCTACTAGTCACG TERM 276 285656 - 285673 + T 71 -6.9 -3.99324 | opp_overlap 285656 285649 CCTAAAACGAAAAAA CGCCTGC CGAG GCAAGCG TTTCTACTAGTCACG Ssed_0252 286073 - 285705 - | hypothetical protein Ssed_0253 287230 - 286268 - | LysR family transcriptional regulator TERM 277 286725 - 286706 - G 70 -7.9 -3.81256 | overlap 286702 ATCGGTAAAAAGTAA CTGATGG GCAATG CCATCAG GTAGGCGATCCATAT Ssed_0254 287338 - 288540 + | Bcr/CflA subfamily drug resistance transporter TERM 278 288596 - 288628 + T 80 -4.7 -5.25803 | ATTGAAACACCCCCT TGCCCGCCAACTG CTAACCA CAGGAAGCGGGCA TTTTTTATGGGGGTT Ssed_0255 289553 - 288663 - | hypothetical protein Ssed_0256 289774 - 290367 + | DTW domain-containing protein TERM 279 290516 - 290533 + T 71 -4.1 -4.99861 | gap 1, overlap 290517 TATGCTGTCCATGCA GGG-AGGC AGC GCCTACTC TTTTTATCATTAGTC Ssed_0257 292780 - 290669 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 280 292445 - 292433 - G 76 -9.1 -3.8698 | opp_overlap 292439 GAATTCAAACGGAAA CAGGG ATA CCCTG GTGGGGAGTTCTCTG TERM 281 292777 - 292767 - G 71 -6.8 -4.30793 | TTAGATAATAAATAA GACC AAC GGTC CATCCTGATACTCCC TERM 282 292913 - 292886 - H 95 -12.2 -4.41633 | opp_overlap 292884, overlap 292883 292887 TAGTGTTAAAAATAA CCTGATTTGAGT TTTG ACTCAAATCAGA AATGATATTTTGTAA TERM 283 292912 - 292887 - H 93 -13.5 -3.24256 | opp_overlap 292884, overlap 292886 292883 AGTGTTAAAAATAAC CTGATTTGAGT TTTG ACTCAAATCAG AAATGATATTTTGTA Ssed_0258 293104 - 293421 + | hypothetical protein Ssed_0259 293459 - 294094 + | methyltransferase type 12 Ssed_0260 294876 - 294163 - | hypothetical protein TERM 284 294681 - 294691 + g 77 -4 -5.1615 | TAATCGGTTGACCGG GTTT GAG AAAC TTTTTTGCCTCTTGC TERM 285 295502 - 295481 - g 76 -11.7 -2.89971 | overlap 295476 GCATTAGAGACCATA TTCGATCTG GAAG CAGATCGAA TCGCCAGTCTCGATA Ssed_0261 295106 - 296437 + | peptidase M16 domain-containing protein Ssed_0262 296434 - 297876 + | peptidase M16 domain-containing protein TERM 286 297917 - 297879 - f 72 -8.9 -3.27653 | gap 1, opp_overlap 297883 297884, overlap 297877 297884 ATTTGGAGGATAAGA GATTAG-GCTTGAGGGCT TTTA AGCCCTCAAGCACCTTTC AGTTTTTCTAGTAAC TERM 287 297883 - 297913 + F 86 -10.5 -4.03085 | gap 1, opp_overlap 297877 297879 297884, overlap 297884 GGAGGATAAGAGATT AG-GCTTGAGGGCT TTTA AGCCCTCAAGCACC TTTCAGTTTTTCTAG TERM 288 297884 - 297912 + F 93 -14 -3.00767 | gap 1, opp_overlap 297877 297879 297884, overlap 297883 GAGGATAAGAGATTA G-GCTTGAGGGCT TTTA AGCCCTCAAGCAC CTTTCAGTTTTTCTA TERM 289 297911 - 297884 - f 93 -14.2 -2.7924 | opp_overlap 297884 297883, overlap 297877 297879 GAGGATAAGAGATTA GGCTTGAGGGCT TTTA AGCCCTCAAGCA CCTTTCAGTTTTTCT TERM 290 298159 - 298192 + GF 77 -9.7 -3.54543 | gap 1, overlap 298161 GTTGTCATTGACCGA TGGCGAGCATAACGTC ACT GA-GTTAGGCTCGCTA TTTACCAACATGGCT TERM 291 298161 - 298190 + GF 77 -10.1 -3.35046 | gap 1, overlap 298159 TGTCATTGACCGATG GCGAGCATAACGTC ACT GA-GTTAGGCTCGC TATTTACCAACATGG Ssed_0263 298019 - 298585 + | hypothetical protein TERM 292 298822 - 298834 + GT 73 -3.3 -4.85918 | GGTGGTTCAGGGAGC GGGGA GAG TCCAC TTTTCTTATCTACTA Ssed_0264 298542 - 299078 + | hypothetical protein Ssed_0265 299590 - 299126 - | RNA methyltransferase TERM 293 300623 - 300633 + G 76 -8.2 -4.07568 | opp_overlap 300630 TGCTCCCGTCGATGG GCCG AAA CGGC TTTTCAGGCGAAAGG Ssed_0266 299843 - 300778 + | LysR family transcriptional regulator Ssed_0267 301671 - 300775 - | putative pyruvate formate lyase activating enzyme TERM 294 301603 - 301578 - GT 100 -9.7 -5.40474 | ACCCTTGCAAAAAAA CAACGAGCCTG CTTC CAGGCCCATCG ACACACGAGAAATTG Ssed_0268 303196 - 301643 - | hypothetical protein TERM 295 303413 - 303388 - R 91 -11.9 -3.83026 | TGGCTGGATATGAAA CAGCCATACCC GCGA GGGCATGACTG TAGATATTTTACTTT Ssed_0269 304967 - 303447 - | aldehyde dehydrogenase (NAD(+)) TERM 296 305257 - 305236 - H 90 -9.5 -4.39426 | gap 1, overlap 305238 CACACTGTGATAAAA GT-GCACACC TGA GGTGTGCCAC AATGGAACACAGCTA TERM 297 305254 - 305238 - H 83 -12.3 -2.53422 | overlap 305236 CACTGTGATAAAAGT GCACACC TGA GGTGTGC CACAATGGAACACAG TERM 298 306380 - 306398 + G 74 -9.5 -3.48395 | ACTCAGGCGCCTTCA CCGGTGC TAATC GCGCCGG TTATATAGGCAAGAT Ssed_0270 305272 - 307068 + | Fis family GAF modulated sigma54 specific transcriptional regulator Ssed_0271 307242 - 308222 + | alcohol dehydrogenase Ssed_0272 309136 - 308219 - | LysR family transcriptional regulator Ssed_0273 309405 - 310925 + | flavocytochrome c Ssed_0274 310954 - 311307 + | tetraheme cytochrome c TERM 299 311355 - 311394 + F 73 -5.9 -4.59773 | opp_overlap 311356, overlap 311356 GTCTGAACCGAAGCG ACCAACCATATTTAG TTTGTGTTTT CTGAATATGGTTGGC TTTTTCACAATAACA TERM 300 311356 - 311393 + F 75 -9.4 -3.35542 | opp_overlap 311356, overlap 311355 TCTGAACCGAAGCGA CCAACCATATTTAG TTTGTGTTTT CTGAATATGGTTGG CTTTTTCACAATAAC Ssed_0275 311595 - 312758 + | porin TERM 301 312826 - 312842 + T 100 -12.3 -5.24531 | opp_overlap 312826 TAAAGACTAGTACAA GGAGGCT TAA AGCCTCC TTTTTTGTGAGCGAT TERM 302 312842 - 312826 - T 90 -12.3 -3.48378 | opp_overlap 312826 TAAAGACTAGTACAA GGAGGCT TAA AGCCTCC TTTTTTGTGAGCGAT Ssed_0276 313735 - 312872 - | transcriptional regulator, LysR family protein Ssed_0277 313869 - 314513 + | TetR family transcriptional regulator Ssed_0278 315877 - 314510 - | integral membrane sensor signal transduction histidine kinase Ssed_0279 316560 - 315877 - | two component transcriptional regulator TERM 303 317160 - 317134 - g 74 -6.6 -4.43309 | overlap 317137 GAATCTCAAGTAAAA CTACTCATGC AGCAAAA GCATGAGAAG CGTCAAGATAAAGCC Ssed_0280 316789 - 317295 + | protein of unknown function, Spy-related TERM 304 317427 - 317471 + G 100 -13 -4.02817 | gap 1, opp_overlap 317419 317438 CCCAATATGACTTCT GGGTCAAGTTAGCTAGCCGCG CAGC TGTGGCTA-CTGCCTTGACCC TTATTATTATCAAGA Ssed_0281 317399 - 318268 + | cation diffusion facilitator family transporter TERM 305 321334 - 321322 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 306 322132 - 322116 - T 75 -8 -4.08546 | overlap 322129 ATGAGTAACGATAAA GGGAGT GAAAA ACTCCC TCGCCGAAAGACCAA TERM 307 322639 - 322628 - T 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 308 324000 - 324055 + T 100 -16.4 -4.62069 | gap 1, opp_overlap 324010 324017, overlap 324010 324017 AGGTCATTTCCAGGC GCCTAATAAACGATAAATCCCCAGCAC TTC GTGTTGGGGATTTTTCGTTTAAC-GGC TTTTTGAAATGACCA TERM 309 324046 - 324010 - T 100 -16.7 -4.1552 | opp_overlap 324000 324010 324017, overlap 324017 CAGGCGCCTAATAAA CGATAAATCCCCAGCAC TTC GTGTTGGGGATTTTTCG TTTAACGGCTTTTTG TERM 310 324010 - 324046 + T 100 -18.9 -3.61889 | opp_overlap 324010 324017, overlap 324000 324017 CAGGCGCCTAATAAA CGATAAATCCCCAGCAC TTC GTGTTGGGGATTTTTCG TTTAACGGCTTTTTG TERM 311 324017 - 324039 + T 100 -14.2 -4.98531 | opp_overlap 324010 324017, overlap 324010 324000 CTAATAAACGATAAA TCCCCAGCAC TTC GTGTTGGGGA TTTTTCGTTTAACGG TERM 312 324039 - 324017 - T 95 -12 -4.20981 | opp_overlap 324017 324010 324000, overlap 324010 CTAATAAACGATAAA TCCCCAGCAC TTC GTGTTGGGGA TTTTTCGTTTAACGG TERM 313 324141 - 324161 + T 83 -11.9 -3.21925 | GAGTAGGGTGGAACT GCTGCGCTT ATC AAGCGTAGC TTGATGCTGCGGTGT TERM 314 324231 - 324265 + T 83 -12.3 -2.85366 | opp_overlap 324239, overlap 324239 ACTCCTGAATTTAAA GTGAAGAAGCCACCT GAATA AGGTGGCTTTTTTGC GTTTGGGCTTTTAAA TERM 315 324257 - 324239 - T 80 -10.3 -3.78234 | opp_overlap 324239 324231 ATTTAAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 316 324239 - 324257 + T 100 -10.3 -5.22039 | opp_overlap 324239, overlap 324231 ATTTAAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 317 325565 - 325548 - T 72 -8.5 -3.61178 | TTGAGTTATTCGAAA CTACTTC TCAC GAAGTAG TCAAAAATTTTACTC TERM 318 328048 - 328036 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 319 328846 - 328830 - T 75 -8 -4.08546 | overlap 328843 ATGAGTAACGATAAA GGGAGT GAAAA ACTCCC TCGCCGAAAGACCAA TERM 320 329353 - 329342 - T 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 321 330724 - 330758 + T 83 -12.3 -2.85366 | opp_overlap 330732, overlap 330732 CAGGCGCCTAATTAA GTGAAGAAGCCACCT GAATA AGGTGGCTTTTTTGC GTTTGGGCTTTTAAA TERM 322 330750 - 330732 - T 80 -10.3 -3.75598 | opp_overlap 330724 330732 TAATTAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 323 330732 - 330750 + T 100 -10.3 -5.22039 | opp_overlap 330732, overlap 330724 TAATTAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 324 331047 - 331025 - T 95 -12 -4.20981 | opp_overlap 331025 CTAATAAACGATAAA TCCCCAGCAC TTC GTGTTGGGGA TTTTTTCGTTTAACG TERM 325 331025 - 331047 + T 100 -14.2 -5.37593 | opp_overlap 331025 CTAATAAACGATAAA TCCCCAGCAC TTC GTGTTGGGGA TTTTTTCGTTTAACG TERM 326 331788 - 331756 - T 100 -15.1 -3.86346 | opp_overlap 331756 331760 331763, overlap 331763 TTAGTGCTGTATAAA TAAAAAAGCCTGCTG CTA CAGCAAGCTTCTTTA TTTGGAAGAGATACT TERM 327 331756 - 331788 + T 82 -10.7 -3.5393 | opp_overlap 331756 331763, overlap 331760 331763 TTAGTGCTGTATAAA TAAAAAAGCCTGCTG CTA CAGCAAGCTTCTTTA TTTGGAAGAGATACT TERM 328 331760 - 331784 + T 78 -7.1 -4.41348 | opp_overlap 331756 331763, overlap 331756 331763 TGCTGTATAAATAAA AAAGCCTGCTG CTA CAGCAAGCTTC TTTATTTGGAAGAGA TERM 329 331781 - 331763 - T 100 -11 -5.72622 | opp_overlap 331760 331756 331763, overlap 331756 TGTATAAATAAAAAA GCCTGCTG CTA CAGCAAGC TTCTTTATTTGGAAG TERM 330 331763 - 331781 + T 85 -8.8 -4.32678 | opp_overlap 331763 331756, overlap 331760 331756 TGTATAAATAAAAAA GCCTGCTG CTA CAGCAAGC TTCTTTATTTGGAAG Ssed_0282 333218 - 331803 - | nitrogen metabolism transcriptional regulator NtrC Ssed_0283 334312 - 333272 - | signal transduction histidine kinase, nitrogen specific, NtrB Ssed_0284 334980 - 334444 - | hypothetical protein TERM 331 335158 - 335133 - R 100 -14.7 -3.64915 | overlap 335127 335135 CCTGATAAAGCATAA GACGGTGCGCC ATCT GGCGCACCGTA GTGAAGGGCGAAAGA TERM 332 335156 - 335135 - R 100 -17.3 -3.39897 | overlap 335133 335127 TGATAAAGCATAAGA CGGTGCGCC ATCT GGCGCACCG TAGTGAAGGGCGAAA Ssed_0285 335858 - 335181 - | ThiJ/PfpI domain-containing protein Ssed_0286 337098 - 335941 - | iron-containing alcohol dehydrogenase TERM 333 337197 - 337173 - R 86 -7.1 -5.14563 | overlap 337175 TGCTTCATTAAAAAA TACCCGCCT TAATCAT AGGCGGGGA GATAGATATTGTTGG TERM 334 337195 - 337175 - R 89 -9.7 -4.20707 | overlap 337173 CTTCATTAAAAAATA CCCGCCT TAATCAT AGGCGGG GAGATAGATATTGTT Ssed_0287 337815 - 337213 - | TetR family transcriptional regulator TERM 335 337962 - 337921 - R 90 -10.9 -4.2074 | opp_overlap 337931, overlap 337926 TCTTGAAGATAGAAA TTTAAGGTAAGGCCTTCGA CATA TCGAAGGCCTTACCTCCGG AGGGGATGAGAATTA TERM 336 337957 - 337926 - R 100 -21.8 -3.37368 | opp_overlap 337931, overlap 337921 AAGATAGAAATTTAA GGTAAGGCCTTCGA CATA TCGAAGGCCTTACC TCCGGAGGGGATGAG TERM 337 337931 - 337952 + r 95 -14.5 -3.05384 | opp_overlap 337926 337921 AGAAATTTAAGGTAA GGCCTTCGA CATA TCGAAGGCC TTACCTCCGGAGGGG Ssed_0288 338292 - 337975 - | hypothetical protein TERM 338 338074 - 338086 + g 75 -7.7 -4.26903 | CATCGCTATTGCAAT TGGCT GAG AGCCA TTTTCATCGCCTGAG Ssed_0289 339613 - 338414 - | sodium:dicarboxylate symporter TERM 339 338705 - 338728 + g 73 -7.4 -4.20918 | gap 1 GAAAATAATCTTGAG GGCGGTG-ATC ATA GATGCTCCGCC TTTATTAAGGTTCAC TERM 340 338846 - 338870 + g 78 -10.8 -3.34398 | overlap 338843 GGAACTCGTGCCCAG TGCTGTCGCT GCCGG AGCGATAGCA TGTTTCCAAAACACC Ssed_0290 342486 - 339691 - | histidine kinase TERM 341 340053 - 340067 + g 70 -2.1 -4.90381 | gap 1, overlap 340053 CAATGATCCCTTGAG CC-ACC ATTT GGTTGG TTTTGTTGTCTTCAA TERM 342 341491 - 341479 - G 77 -4.1 -5.00884 | opp_overlap 341481, overlap 341480 341483 ATTTTTGTGAAAAAA CTCAG CGT CTAAG GTGATTGAATCACCT Ssed_0291 343454 - 342492 - | ABC-type nitrate/sulfonate/bicarbonate transport system protein TERM 343 343610 - 343591 - R 93 -7.8 -5.4756 | opp_overlap 343591 AATGGCAATAAAAAA GCCCCGGA AATA TCCAGAGC TATATCGATGTTACA Ssed_0292 345052 - 343643 - | glutamine synthetase TERM 344 345069 - 345085 + H 80 -4.4 -5.20783 | opp_overlap 345076, overlap 345072 CTAAGTCTCCGAGTA GGGTAA AGGGG TTGCCC TTTTTATATTTAAAT Ssed_0293 345432 - 347255 + | GTP-binding protein TypA TERM 345 347353 - 347328 - T 100 -16.3 -4.62471 | opp_overlap 347328 GTTAAGCTTTAAAAA GCCCTGAACAT GAAA ATGTTCAGGGC TTTTTGTTATCTGCA TERM 346 347328 - 347353 + T 100 -16.3 -5.24796 | opp_overlap 347328 GTTAAGCTTTAAAAA GCCCTGAACAT GAAA ATGTTCAGGGC TTTTTGTTATCTGCA Ssed_0294 348784 - 347570 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 347 349008 - 348993 - R 71 -7.6 -3.81755 | opp_overlap 348993 ATCCCTCAAACAGAA CCTCAA AGAC TTGAGG TGCTATCGAAAAAAC TERM 348 349041 - 349023 - R 100 -11.7 -5.08824 | opp_overlap 349023 GTGCTATCGAAAAAA CACCGGC GTGGT GCCGGTG TTATTGTGATAGATG TERM 349 349023 - 349041 + r 93 -12.4 -3.8512 | opp_overlap 349023 GTGCTATCGAAAAAA CACCGGCG TGG TGCCGGTG TTATTGTGATAGATG Ssed_0295 349839 - 349069 - | hypothetical protein TERM 350 349971 - 349983 + r 76 -9.1 -3.76835 | CTACTCCAGCCACGC GGAGC AGA GCTCC TTCTGTATTATTCAA Ssed_0296 351406 - 350171 - | arabinose efflux permease-like protein Ssed_0297 351845 - 351507 - | flavocytochrome c TERM 351 351901 - 351876 - R 100 -11.9 -5.94713 | ATTGGATAAAAAAAA CCGAGACCCAA AAAA TCGGATCTCGG TTAAGGGGGACTACA Ssed_0298 353438 - 351912 - | putative flavoprotein subunit of a reductase TERM 352 352763 - 352775 + g 81 -3.3 -5.46629 | overlap 352759 CAATCAGGTGGTCGG TGCGG ATA CCGAA TTTTTTTAACATCTT TERM 353 353286 - 353297 + g 73 -2.2 -5.06414 | CTTCTCTAACAGTAC GGTT GTCA GACC TTTTTCTTCGGCGGC TERM 354 353681 - 353714 + H 70 -2.5 -5.08086 | gap 1, opp_overlap 353672 353670, overlap 353682 TTAAGATTGCACTTT GCGTGCCAA-TCGGTA AGT TACTGAATTGGTATGG TTTTATGTTTTTTGT Ssed_0299 353807 - 355450 + | sigma-54 dependent trancsriptional regulator TERM 355 355471 - 355457 - T 72 -10 -2.69649 | overlap 355456 ACAGCTTGATAGAAC GCTGAC TGC GTCAGC TATAGGATGCCCGCT Ssed_0300 356309 - 355662 - | hypothetical protein TERM 356 355755 - 355766 + g 72 -5.8 -4.38154 | ATCGGTCTGCAGGCT GGTG AACT CACC TTTTATGGCGCCTAT Ssed_0301 356578 - 356351 - | hypothetical protein TERM 357 356991 - 357039 + G 70 -9.5 -3.12606 | GGCCGTGGGTATTGC CGCCCTGATGGTGGTGGCGATCA TGC TGATCTCCGCTATCGATAAGGCG TTGAATAATATCTGG Ssed_0302 356728 - 357624 + | ribonuclease BN Ssed_0303 357624 - 358577 + | alpha/beta hydrolase fold Ssed_0304 358574 - 359143 + | hypothetical protein TERM 358 359171 - 359187 + F 100 -12.3 -4.74103 | overlap 359167 TCTAAAAGTTTCTGG GGCCTAG GTT CTAGGCC TTTTTAAATTGGAGA Ssed_0305 359212 - 359649 + | D-tyrosyl-tRNA deacylase Ssed_0306 359652 - 360125 + | thioesterase domain-containing protein Ssed_0307 360318 - 360911 + | azoreductase TERM 359 361029 - 361054 + T 100 -19.1 -5.28176 | CCTATTGTTCGTCCA TCCCCCAGCGA CTAG TCGCTGGGGGA TTTTTTATAACTGAA Ssed_0308 361397 - 361077 - | rhodanese domain-containing protein TERM 360 361427 - 361471 + r 73 -10.3 -2.87132 | opp_overlap 361431, overlap 361431 361435 TCAGATGTTTTGGAT GAGATCGATTAGATTGTTCTT GAT AAGATTAATCTAATTGATATC TCTGTGCAACAAGAA TERM 361 361431 - 361467 + r 72 -9.7 -3.05022 | opp_overlap 361431, overlap 361427 361435 ATGTTTTGGATGAGA TCGATTAGATTGTTCTT GAT AAGATTAATCTAATTGA TATCTCTGTGCAACA Ssed_0309 362268 - 361522 - | hypothetical protein Ssed_0310 363529 - 362282 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 362 363228 - 363210 - G 76 -11 -3.14564 | overlap 363215 CTACCGGTTGAGGAA CCATAGGC GAT GCCCATGG CACCGGAACTCACGA Ssed_0311 364292 - 363567 - | 3-ketoacyl-(acyl-carrier-protein) reductase Ssed_0312 364787 - 364299 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ Ssed_0313 365989 - 364784 - | 3-oxoacyl-(acyl carrier protein) synthase I Ssed_0314 366692 - 366060 - | hypothetical protein TERM 363 366731 - 366752 + r 86 -4.4 -5.37345 | overlap 366732 AGCGTTTAGCGGCAT AGCTCAAC AATAAG GTTGAGCC TTTTTTCTGATTCGG TERM 364 366732 - 366751 + r 73 -7.9 -3.81322 | overlap 366731 GCGTTTAGCGGCATA GCTCAAC AATAAG GTTGAGC CTTTTTTCTGATTCG Ssed_0315 367983 - 366721 - | tryptophan halogenase TERM 365 366815 - 366825 + g 75 -5.4 -4.82162 | CCGGCTAAGATTGAG CAGA CCA TCTG TTTTATCTTGTTATC Ssed_0316 370397 - 367983 - | hypothetical protein Ssed_0317 371197 - 370394 - | hypothetical protein Ssed_0318 371673 - 371194 - | thioesterase superfamily protein Ssed_0319 373232 - 371673 - | histidine ammonia-lyase Ssed_0320 374936 - 373233 - | glycosyl transferase family protein Ssed_0321 375313 - 374936 - | thioester dehydrase family protein TERM 366 375010 - 375033 + g 74 -6.8 -4.37971 | ATCGCTTCTCATCAT CAAAATAGCT AAAG AGCAATTTTG TTTTACTGCTGTTTT Ssed_0322 376670 - 375306 - | hypothetical protein Ssed_0323 377215 - 376667 - | hypothetical protein TERM 367 377134 - 377102 - G 73 -3.4 -4.93365 | gap 1, overlap 377104 CCGCAGAATTAAAAA CAGGCAAAGTACCAT GGCT ATGGTGCCT-GCCGG CAAATAGTTGAGTCC TERM 368 377174 - 377158 - G 71 -4.4 -4.67048 | overlap 377159 TGAGTCCAAAATAAA CGGCTA AAGGA TAGCCA ATCAATAAGAGACTG Ssed_0324 377463 - 377215 - | acyl carrier protein Ssed_0325 377726 - 377472 - | acyl carrier protein, putative Ssed_0326 378521 - 377730 - | phospholipid/glycerol acyltransferase Ssed_0327 379230 - 378514 - | hypothetical protein TERM 369 379420 - 379451 + r 82 -11.7 -3.07935 | overlap 379425 TTTATGAGGTAGGTT TTTAACCTGCAGC GCGGGG GCTGCAGGTTACA TTCGATGGATGAGGT TERM 370 379425 - 379446 + r 82 -11.6 -3.19371 | overlap 379420 GAGGTAGGTTTTTAA CCTGCAGC GCGGGG GCTGCAGG TTACATTCGATGGAT Ssed_0328 380344 - 379475 - | hypothetical protein Ssed_0329 382606 - 380531 - | ATP-dependent DNA helicase RecG TERM 371 380852 - 380827 - G 71 -8.9 -3.58726 | overlap 380830 GGGCTTTATACATAA GTACGCAGTGG CTGG CCACCGCGCCC CGGCCGACGCGGCCC TERM 372 380849 - 380830 - G 76 -11.4 -2.91997 | overlap 380827 CTTTATACATAAGTA CGCAGTGG CTGG CCACCGCG CCCCGGCCGACGCGG TERM 373 382748 - 382766 + r 73 -10.2 -2.78798 | overlap 382747 TGGCACTATCTCCTA GCCGGACG AGT CGTGCGGC CTTTGGGTAGAGGGT Ssed_0330 383719 - 382787 - | CaCA family Na(+)/Ca(+) antiporter TERM 374 383856 - 383839 - R 100 -11.3 -5.55769 | opp_overlap 383839 TCCCATAACAAAAAA GCATGCC CAAT GGCATGC TTTAAATAAGGTAAC TERM 375 383839 - 383856 + r 88 -11.3 -3.65902 | opp_overlap 383839 TCCCATAACAAAAAA GCATGCC CAAT GGCATGC TTTAAATAAGGTAAC Ssed_0331 385558 - 383891 - | AMP-dependent synthetase and ligase Ssed_0332 386499 - 385804 - | tRNA guanosine-2'-O-methyltransferase TERM 376 386546 - 386531 - R 100 -11.8 -5.00196 | GTTTAAATAACAAAA GGGCGC CGCA GCGCCC TAACTGTGCAGAGAT Ssed_0333 386950 - 386567 - | putative endoribonuclease L-PSP Ssed_0334 389145 - 387040 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 377 388969 - 388950 - G 73 -10 -3.36327 | GGAGGGCAGCCATAA GCGTCTCA TGAT CGAGACGC ATATCGGCCAGGATG TERM 378 388977 - 389002 + g 72 -10.3 -2.97925 | CGAGACGCATATCGG CCAGGATGCGG GCTA CCGCAACCGGG TGTGTGATATAAGGT Ssed_0335 389443 - 389159 - | DNA-directed RNA polymerase subunit omega Ssed_0336 390123 - 389500 - | guanylate kinase Ssed_0337 390490 - 391557 + | hypothetical protein TERM 379 392599 - 392589 - g 71 -6.8 -4.17048 | opp_overlap 392589 GTGGGTGCAAAATAA GCTC AAT GAGC TTGTAAATAAGAAGA Ssed_0338 391663 - 392631 + | hypothetical protein Ssed_0339 392628 - 393704 + | aminoglycoside phosphotransferase TERM 380 393732 - 393764 + T 79 -10.7 -3.25942 | opp_overlap 393732 393729 393734 GTAAGCCTCAAATCA GAGTCGGTTCC TTTGCCCCCCC GGAACCGACTC TTCATATACGGGGCT TERM 381 393764 - 393732 - T 78 -10.7 -2.92667 | opp_overlap 393732, overlap 393729 393734 GTAAGCCTCAAATCA GAGTCGGTTCC TTTGCCCCCCC GGAACCGACTC TTCATATACGGGGCT Ssed_0340 395614 - 394139 - | hypothetical protein Ssed_0341 395907 - 396092 + | hypothetical protein TERM 382 396416 - 396389 - T 100 -17 -5.31275 | GTCCACCATAAAAAA CGTCCCGAGACC TTAA GGTCACGGGACG ACGGAAAAATACCTT Ssed_0342 396896 - 396516 - | tetraheme cytochrome c Ssed_0343 398584 - 396941 - | phenylalanine/histidine ammonia-lyase Ssed_0344 400170 - 398611 - | flavocytochrome c flavin subunit, putative TERM 383 400549 - 400529 - R 85 -6.9 -5.02715 | opp_overlap 400529, overlap 400548 ACAGTAAATGAAAAA GGCTCTATA TAT CATAGAACC TTTTTAAGGTGCCAT Ssed_0345 401804 - 400647 - | hypothetical protein TERM 384 402276 - 402301 + H 71 -6.3 -4.18018 | gap 1 TAAATACAATCTTGA TCACAAATACCT ATG GGGT-TTTGTGA TTTTGAGTCGGAGGA Ssed_0346 402419 - 403975 + | formate hydrogenlyase transcriptional activator, putative Ssed_0347 404430 - 403972 - | hypothetical protein Ssed_0348 405120 - 404461 - | cytoplasmic chaperone TorD family protein TERM 385 405194 - 405170 - R 100 -15.1 -5.28683 | ATTAACAGGAAAAAA GGTGCCATTCC AAA AGAATGGCACC AAGCTGGGGGTTAAA Ssed_0349 405840 - 405205 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_0350 408282 - 405853 - | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein Ssed_0351 410329 - 408323 - | outer membrane protein TERM 386 409739 - 409749 + g 73 -4.6 -4.81814 | GACAATGCTACTGCT CTGG TAA CCGG TTTTATTCTCGTGGT Ssed_0352 411298 - 410345 - | cytochrome c family protein TERM 387 411094 - 411104 + g 100 -5.4 -5.93809 | CACCGAATATCGCCA TGAC CTT GTCA TTTTTTTTATGACAC TERM 388 411734 - 411764 + r 76 -2 -5.49809 | overlap 411736 411737 TTCATGTTTATTCAT AATTCAATTGATAA TCA TTATTGATTGAGTG TTTTTTTGCACTTTA Ssed_0353 413807 - 412077 - | OPT family oligopeptide transporter TERM 389 412164 - 412144 - G 74 -9 -3.65812 | gap 1 TCTCCTGCAATACAA CCTGC-GGC GATG GCCAGCAGG AATCGTTGCGACCAG TERM 390 414682 - 414671 - g 74 -3 -5.0133 | TACCCTCTGAAAAAA GTTT TCGA AAAC CTATTAAAGTTAACA Ssed_0354 414104 - 414796 + | hypothetical protein Ssed_0355 415314 - 414994 - | hypothetical protein Ssed_0356 415970 - 415350 - | cytoplasmic chaperone TorD family protein TERM 391 416016 - 415991 - R 100 -9.7 -5.27938 | opp_overlap 415995, overlap 415995 ACTCCGAAACAAAAA TAAAGGCGGCC AGAG GGCCACCTTAA CTATAAAATCTACTT TERM 392 416012 - 415995 - R 93 -10.5 -5.12987 | opp_overlap 415995, overlap 415991 CGAAACAAAAATAAA GGCGGCC AGAG GGCCACC TTAACTATAAAATCT Ssed_0357 418128 - 416026 - | hypothetical protein Ssed_0358 418747 - 418130 - | anaerobic dimethyl sulfoxide reductase, subunit B Ssed_0359 421208 - 418758 - | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein TERM 393 421262 - 421287 + r 74 -6.1 -4.42238 | opp_overlap 421263 421265, overlap 421263 421265 GCTTAATTGTGAAAA ATGCACCGATC TTGT GGTCGGTGTAG TTTTGATTGAGGTCG TERM 394 421263 - 421286 + r 73 -9.6 -3.2486 | opp_overlap 421263 421265, overlap 421262 421265 CTTAATTGTGAAAAA TGCACCGATC TTGT GGTCGGTGTA GTTTTGATTGAGGTC TERM 395 421286 - 421263 - R 71 -5.2 -4.62471 | opp_overlap 421263 421262 421265, overlap 421265 CTTAATTGTGAAAAA TGCACCGATC TTGT GGTCGGTGTA GTTTTGATTGAGGTC TERM 396 421265 - 421284 + r 75 -10 -3.18268 | opp_overlap 421263 421265, overlap 421263 421262 TAATTGTGAAAAATG CACCGATC TTGT GGTCGGTG TAGTTTTGATTGAGG Ssed_0360 422939 - 421242 - | hypothetical protein Ssed_0361 423809 - 422949 - | decaheme cytochrome c MtrA TERM 397 424263 - 424274 + r 86 -2.2 -6.01187 | TGCAGCTGGTGGTGA GGTC ACAC GATC TTTTTTTATTTGCTT Ssed_0362 425414 - 424401 - | integrase, catalytic region TERM 398 424586 - 424572 - G 74 -6.4 -4.386 | opp_overlap 424572 GAATGGCGCATAAAA CTCGCT GTG AGCAAG GTTGTGAAATCGGGC Ssed_0363 427050 - 425452 - | sodium/sulphate symporter TERM 399 426808 - 426780 - G 81 -5.9 -5.00616 | opp_overlap 426782, overlap 426782 TGGCGGCGCAAAAAA TGGCGAGCATGGC TTG ACCATGCCAGCTA AATTCAACATTACCC Ssed_0364 427389 - 428024 + | hypothetical protein Ssed_0365 428039 - 428509 + | adenylate cyclase TERM 400 429231 - 429250 + G 71 -7 -4.08216 | overlap 429237 TTAATCTTTGGATTT GCCGCGGC GTTT GCCATGGC TTTTGCCACGGCTGC Ssed_0366 428526 - 429851 + | hypothetical protein TERM 401 430879 - 430894 + G 71 -6.8 -4.1523 | GCATCTGCTTCATCT CGGTGC CAGT GCACTG TTTGTATATAATAAC Ssed_0367 430127 - 431479 + | phosphate-selective porin O and P Ssed_0368 431489 - 432313 + | hypothetical protein Ssed_0369 432396 - 433064 + | hypothetical protein TERM 402 433711 - 433724 + G 76 -2.3 -5.3236 | overlap 433711 GAATTGAGTTCAGTC CCGCT ATGC AGCTG TTTTTTATCGGTTCT TERM 403 433789 - 433779 - g 82 -5.4 -5.05782 | opp_overlap 433786 ACCTATTCCAAAAAA GTGA TGC TCAC CGTAGGAGATAACTT Ssed_0370 433077 - 434120 + | phosphate transporter TERM 404 434662 - 434690 + F 79 -8.9 -3.90097 | overlap 434658 434666 TTTCTGTAGTTCATA CAAATTGCGGGGT TTA GCTCTGCGATTTG TTGTGTTTATAGCCT Ssed_0371 435056 - 436882 + | hypothetical protein Ssed_0372 437011 - 438036 + | putative manganese-dependent inorganic pyrophosphatase TERM 405 438081 - 438054 - f 73 -5.6 -4.65933 | opp_overlap 438057, overlap 438055 438057 438077 GACGGGTAAAAGAAA TCAGGTTCTTGA GCCT TCAAGAACCTTG TAAGAAAGGCATGAT TERM 406 438080 - 438055 - f 72 -9.1 -3.38836 | opp_overlap 438057, overlap 438054 438057 438077 ACGGGTAAAAGAAAT CAGGTTCTTGA GCCT TCAAGAACCTT GTAAGAAAGGCATGA TERM 407 438057 - 438078 + F 86 -11.7 -3.28791 | opp_overlap 438057 438055 438054 438077 GGGTAAAAGAAATCA GGTTCTTGA GCCT TCAAGAACC TTGTAAGAAAGGCAT TERM 408 438078 - 438057 - f 83 -11.7 -3.25598 | opp_overlap 438057, overlap 438055 438054 438077 GGGTAAAAGAAATCA GGTTCTTGA GCCT TCAAGAACC TTGTAAGAAAGGCAT TERM 409 438159 - 438180 + F 77 -10.8 -2.87211 | CCATCTCATCGAGCA GGGCGGTC AACTCA GGCCGCCC TATATCGAAGAACAT Ssed_0373 438266 - 438928 + | adenylate kinase TERM 410 438999 - 438959 - T 79 -10.7 -3.20349 | overlap 438957 TTTTCAAACTGAACA GTTAACCCCAAGCTT GCAATATATTT AAACTTGGGGTTAAC CCGGACCTTGGTATT Ssed_0374 439681 - 439043 - | ERCC4 domain-containing protein Ssed_0375 441147 - 439843 - | HipA domain-containing protein Ssed_0376 441382 - 441134 - | XRE family transcriptional regulator TERM 411 441765 - 441747 - R 93 -11 -4.92385 | opp_overlap 441747 TACAGGCAAACAAAA GCCCAGCT ATA AACTGGGC TTAGATACACTAATT Ssed_0377 442660 - 441797 - | hypothetical protein Ssed_0378 442841 - 443554 + | tRNA nucleotidyltransferase TERM 412 443575 - 443590 + F 86 -8.2 -4.87665 | opp_overlap 443575 ATAGAATAAAGATAA GGGCCC TGCG GGGTCC TTTTTGTAAGTAAAA TERM 413 443782 - 443792 + G 76 -8.2 -4.04206 | overlap 443779 GGCCGTGACCTAGCT CGCC TCG GGCG TTTCTATGCCGCTGC Ssed_0379 443641 - 444282 + | orotate phosphoribosyltransferase TERM 414 444383 - 444403 + T 100 -11.9 -5.26316 | opp_overlap 444383 GGCAAAAAATAAAAA CGCTGCGTT TAT AATGCAGCG TTTTTTCTGGACTAG TERM 415 444403 - 444383 - T 100 -9.7 -5.75538 | opp_overlap 444383 GGCAAAAAATAAAAA CGCTGCGTT TAT AATGCAGCG TTTTTTCTGGACTAG Ssed_0380 445241 - 444582 - | GTP cyclohydrolase I TERM 416 445250 - 445268 + r 77 -5.3 -4.88495 | ATGTCATAAGTTCCT CCACTAT GATGG GTAGTGG TTTTATTGTGTCTCT TERM 417 445441 - 445459 + r 100 -13.2 -4.07885 | opp_overlap 445441 TAAGATAACAAAAAA GCCGATAG AGG CTATCGGC TTTTAAGGGGGAGTC TERM 418 445459 - 445441 - R 100 -13.2 -5.64304 | opp_overlap 445441 TAAGATAACAAAAAA GCCGATAG AGG CTATCGGC TTTTAAGGGGGAGTC Ssed_0381 447444 - 445480 - | peptidase S9 prolyl oligopeptidase TERM 419 447308 - 447323 + g 73 -4.7 -4.7629 | ATCGTGCTGAGGTAG TCTCC ACCAGG GGAGA TTTTTACGTTACTAA Ssed_0382 448456 - 447863 - | nucleoid occlusion protein TERM 420 448025 - 448035 + g 73 -5.4 -4.57353 | ATTAAAGCCTTTGCC CTCT CTC AGAG TTTTCTCTCGTAAGA Ssed_0383 449059 - 448601 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 421 448715 - 448699 - G 74 -2.9 -5.08601 | opp_overlap 448699, overlap 448702 CGACCGGAACAAAAA CGAGTTG AGC CAACCTG TCTCCTATCTCTAAG Ssed_0384 450258 - 449056 - | phosphopantothenoylcysteine decarboxylase, phosphopantothenate--cysteine ligase TERM 422 449125 - 449142 + g 71 -4.8 -4.58395 | TAGTTTATCCGTTGC GGGGAG ATCTTG CTCTCC TTTTTCCCAAATCAC TERM 423 449369 - 449379 + g 75 -5.4 -4.70921 | AATGAAAGCTGCATC TCAG TCG CTGA TTTCTTTATCTTGTC TERM 424 450403 - 450385 - H 79 -3.2 -5.48787 | AGAACAGATAAAAAA TCACAA AGGGAGG TTGTGA TGGGGATTAAAGATT Ssed_0385 450403 - 451080 + | DNA repair protein RadC TERM 425 451278 - 451290 + G 80 -4.8 -5.09225 | opp_overlap 451278 CACACGCGAAAAACT CGAC ACGTC GTCG TTTTTTACCTAACCT Ssed_0386 451208 - 451444 + | ribosomal protein L28 Ssed_0387 451451 - 451624 + | 50S ribosomal protein L33 TERM 426 451665 - 451649 - f 100 -13.7 -3.87815 | opp_overlap 451649 TCTTACTTCTAGAAA GCCCCTG TTT CAGGGGC TTTTTTTTGCCTGTT TERM 427 451649 - 451665 + F 100 -13.7 -5.85178 | opp_overlap 451649 TCTTACTTCTAGAAA GCCCCTG TTT CAGGGGC TTTTTTTTGCCTGTT Ssed_0388 451913 - 453232 + | N-acetylglutamate synthase TERM 428 453519 - 453536 + T 100 -11.3 -5.4251 | opp_overlap 453519 ACTGGCAACAAAAAA GGAGGTG TTAT CACCTCC TTTTTTATGTCTGGA TERM 429 453536 - 453519 - T 100 -11.3 -5.45652 | opp_overlap 453519 ACTGGCAACAAAAAA GGAGGTG TTAT CACCTCC TTTTTTATGTCTGGA TERM 430 453588 - 453621 + T 72 -4.5 -4.6902 | opp_overlap 453587, overlap 453609 CTTGCCGTTAAAACT GCATCAGAGAAAGTT TCAG GACTCTCTCAGAGGC TTTTTACGCTTATAG Ssed_0389 454499 - 453603 - | rarD protein TERM 431 454159 - 454145 - G 74 -2.8 -5.06414 | overlap 454146 GTTCGCTAAGAAAAA CCATAC CTA GCATGA CATTAACCAGAGGGT TERM 432 454402 - 454388 - G 73 -7.2 -4.28994 | CACGATGGATCAAAA TTTCAG TCG CTGAAA CGTGATCGAGTAATT Ssed_0390 455209 - 454745 - | hypothetical protein TERM 433 456488 - 456476 - g 71 -10.5 -2.83715 | CCTATTATCAGGAGA CCGGC AGA GCCGG ACGTGACGGTTTAGA Ssed_0391 455509 - 457332 + | ATP-dependent DNA helicase RecQ Ssed_0392 459089 - 457338 - | response regulator receiver protein TERM 434 459516 - 459537 + H 100 -11.5 -5.8901 | opp_overlap 459516 ACCAGCATTCACAAA CCCCGCGCT AACA ACCGCGGGG TTTTTTGTTTTATAT TERM 435 459537 - 459516 - H 90 -11.5 -3.93963 | opp_overlap 459516 ACCAGCATTCACAAA CCCCGCGCT AACA ACCGCGGGG TTTTTTGTTTTATAT TERM 436 460880 - 460860 - g 80 -8.9 -4.15006 | AGATCGACGGTAAAA CGGTCACTG AGG CTGCGACCG GAAATGGTCCCGTCG Ssed_0393 459605 - 461176 + | 2-isopropylmalate synthase Ssed_0394 461233 - 462327 + | 3-isopropylmalate dehydrogenase Ssed_0395 462332 - 463732 + | isopropylmalate isomerase large subunit Ssed_0396 463746 - 464351 + | isopropylmalate isomerase small subunit TERM 437 464428 - 464389 - f 93 -12.3 -4.10007 | opp_overlap 464391 464393, overlap 464391 464393 464396 ACAAGCTTGGTAAAA CAGAGAAGCCGAATGGA TGTTTG TCCATTCGGCTTCTGTT TTAATGAGCAGGCAC TERM 438 464426 - 464391 - f 100 -14.9 -3.64488 | opp_overlap 464391 464393, overlap 464389 464393 464396 AAGCTTGGTAAAACA GAGAAGCCGAATGGA TGTTTG TCCATTCGGCTTCTG TTTTAATGAGCAGGC TERM 439 464391 - 464426 + F 100 -15.6 -4.25104 | opp_overlap 464389 464391 464393 464396, overlap 464393 AAGCTTGGTAAAACA GAGAAGCCGAATGGAT GTTT GTCCATTCGGCTTCTG TTTTAATGAGCAGGC TERM 440 464424 - 464393 - f 100 -17.5 -3.39908 | opp_overlap 464391 464393, overlap 464391 464389 464396 GCTTGGTAAAACAGA GAAGCCGAATGGA TGTTTG TCCATTCGGCTTC TGTTTTAATGAGCAG TERM 441 464393 - 464424 + F 100 -18.2 -3.73042 | opp_overlap 464393 464391 464389 464396, overlap 464391 GCTTGGTAAAACAGA GAAGCCGAATGGAT GTTT GTCCATTCGGCTTC TGTTTTAATGAGCAG TERM 442 464421 - 464396 - f 100 -13.4 -3.83378 | opp_overlap 464393 464391, overlap 464393 464391 464389 TGGTAAAACAGAGAA GCCGAATGGA TGTTTG TCCATTCGGC TTCTGTTTTAATGAG Ssed_0397 464841 - 466178 + | long-chain fatty acid transport protein TERM 443 466199 - 466223 + F 100 -17.9 -5.07107 | opp_overlap 466199 AACTTATTGAATAAA GGGGTCAGAGC TTT GCTCTGGCCCC TTTTTTACACCTTTA TERM 444 466223 - 466199 - f 100 -15.7 -4.21631 | opp_overlap 466199 AACTTATTGAATAAA GGGGTCAGAGC TTT GCTCTGGCCCC TTTTTTACACCTTTA Ssed_0398 466420 - 466917 + | hypothetical protein Ssed_0399 466976 - 468463 + | glycerol kinase Ssed_0400 468835 - 468533 - | hypothetical protein Ssed_0401 469277 - 469735 + | cell division protein MraZ TERM 445 470611 - 470595 - g 70 -2.2 -4.84642 | CTGAAATCAATAAAA GCCGTT TACTC AAAGGC ATAGGTAAAGCAATC Ssed_0402 469763 - 470707 + | S-adenosyl-methyltransferase MraW Ssed_0403 470784 - 471098 + | cell division protein FtsL TERM 446 472611 - 472597 - g 78 -5.6 -4.96848 | GGTGTCACAGAAAAA GGTGGC ACG GCGACC AAAGCCCATATTGAG Ssed_0404 471175 - 472911 + | peptidoglycan glycosyltransferase Ssed_0405 472911 - 474392 + | UDP-N-acetylmuramyl-tripeptide synthetase Ssed_0406 474389 - 475756 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl- D-alanyl ligase TERM 447 476763 - 476796 + G 74 -3.1 -5.13016 | opp_overlap 476750 AGGCTGGCCAGAGCC CAGAGTGATTGTTCG TTTT TGGATTATCTCTCTG TTTTTAGTTTTACTT Ssed_0407 475756 - 476838 + | phospho-N-acetylmuramoyl-pentapeptide-transferase Ssed_0408 476911 - 478242 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 448 479095 - 479127 + G 71 -4.2 -4.66318 | gap 1, overlap 479099 CGAAGCCCATACGGA CTTTA-TCTTTGCCG TTAT CGGCGAAGAGTTAGG TTTTATTGGCATCGT Ssed_0409 478235 - 479467 + | cell division protein FtsW Ssed_0410 479448 - 480545 + | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Ssed_0411 480547 - 482016 + | UDP-N-acetylmuramate--alanine ligase Ssed_0412 482148 - 482912 + | polypeptide-transport-associated domain-containing protein TERM 449 483876 - 483858 - g 75 -11.8 -2.5383 | opp_overlap 483872, overlap 483855 483853 483872 AAAGAATTAAGAGAC TCTGGTCT AGA AGACCAGA TCGCAGCTGGTATCG TERM 450 483932 - 483947 + G 76 -9 -3.83502 | TGAAGGGACGGTTGA TGTGGC TGAA GCCACA TTTGGTATGCCAGTG Ssed_0413 482916 - 484151 + | cell division protein FtsA TERM 451 484960 - 484946 - g 76 -11.4 -2.76815 | opp_overlap 484948 484956 484956, overlap 484945 484948 ACCGTGCCGAAGAAG CAGCCG AAG CGGCTG TTGCCAGTCCTTTGC Ssed_0414 484228 - 485403 + | cell division protein FtsZ TERM 452 486066 - 486083 + G 71 -8.5 -3.72576 | opp_overlap 486057 TTTAAAGGTTTTAGA GTCGATT TTGC AATCGAC TTTAATCACCCCGAA Ssed_0415 485604 - 486524 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 453 486576 - 486610 + T 100 -15.1 -4.03234 | overlap 486582 TAACGCTAAGATTGC CTTGAACGGCTGGCT AATGC AGCCAGCCGTTTTAG TTTCTCTGCCAAAGA TERM 454 486582 - 486604 + T 100 -14.9 -4.65153 | overlap 486576 TAAGATTGCCTTGAA CGGCTGGCT AATGC AGCCAGCCG TTTTAGTTTCTCTGC Ssed_0416 487018 - 486566 - | hypothetical protein TERM 455 487250 - 487234 - g 87 -5.1 -5.47399 | overlap 487237 TGAAGCGCAAAAAAA TGAGCTC ATA GAGCTTA AAGGTGCGACAGAAG Ssed_0417 487046 - 487945 + | peptidase M23B Ssed_0418 488005 - 490728 + | preprotein translocase subunit SecA TERM 456 490758 - 490776 + T 100 -11 -5.72622 | opp_overlap 490758 TAGAAGATTATTAAA GGCCACTC AAT GAGTGGTC TTTTTTATTTCTCCG TERM 457 490776 - 490758 - T 77 -8.8 -3.8572 | opp_overlap 490758 TAGAAGATTATTAAA GGCCACTC AAT GAGTGGTC TTTTTTATTTCTCCG TERM 458 491373 - 491356 - T 72 -8.5 -3.61178 | TTGAGTTATTCGAAA CTACTTC TCAC GAAGTAG TCAAAAATTTTACTC TERM 459 493420 - 493388 - T 81 -11.5 -3.00022 | opp_overlap 493389 493416, overlap 493395 TGCATTGGATAGAGA TGCCAAAGATAAACT AAT AATTTATCTTTGGCT TTTTTAAGCCCGTTC TERM 460 493389 - 493419 + T 100 -12.8 -5.01732 | opp_overlap 493388 493395, overlap 493416 GCATTGGATAGAGAT GCCAAAGATAAACT AAT AATTTATCTTTGGC TTTTTTAAGCCCGTT TERM 461 494166 - 494154 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 462 494964 - 494948 - T 75 -8 -4.08546 | overlap 494961 ATGAGTAACGATAAA GGGAGT GAAAA ACTCCC TCGCCGAAAGACCAA TERM 463 495471 - 495460 - T 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 464 496844 - 496878 + T 83 -12.3 -2.85366 | opp_overlap 496852, overlap 496852 CAGGCGCCTAATTAA GTGAAGAAGCCACCT GAATA AGGTGGCTTTTTTGC GTTTGGGCTTTTAAA TERM 465 496870 - 496852 - T 80 -10.3 -3.75598 | opp_overlap 496844 496852 TAATTAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 466 496852 - 496870 + T 100 -10.3 -5.22039 | opp_overlap 496852, overlap 496844 TAATTAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 467 497145 - 497167 + T 100 -14.2 -5.37593 | opp_overlap 497145 CTAATAAACGATAAA TCCCCAGCAC TTC GTGTTGGGGA TTTTTTCGTTTAACG TERM 468 497167 - 497145 - T 95 -12 -4.20981 | opp_overlap 497145 CTAATAAACGATAAA TCCCCAGCAC TTC GTGTTGGGGA TTTTTTCGTTTAACG TERM 469 497270 - 497290 + T 83 -11.9 -3.21925 | GAGTAGGGTGGAACT GCTGCGCTT ATC AAGCGTAGC TTGATGCTGCGGTGT TERM 470 497360 - 497394 + T 83 -12.3 -2.85366 | opp_overlap 497368, overlap 497368 ACTCCTGAATTTAAA GTGAAGAAGCCACCT GAATA AGGTGGCTTTTTTGC GTTTGGGCTTTTAAA TERM 471 497386 - 497368 - T 80 -10.3 -3.78234 | opp_overlap 497360 497368 ATTTAAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 472 497368 - 497386 + T 100 -10.3 -5.22039 | opp_overlap 497368, overlap 497360 ATTTAAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 473 498716 - 498699 - T 72 -8.5 -3.61178 | TTGAGTTATTCGAAA CTACTTC TCAC GAAGTAG TCAAAAATTTTACTC TERM 474 501218 - 501206 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 475 502016 - 502000 - T 75 -8 -4.08546 | overlap 502013 ATGAGTAACGATAAA GGGAGT GAAAA ACTCCC TCGCCGAAAGACCAA TERM 476 502523 - 502512 - T 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 477 504194 - 504228 + T 83 -12.3 -2.82289 | opp_overlap 504202, overlap 504202 CAGGCGCCTAATTAA GTGAAGAAGCCACCT GAATA AGGTGGCTTTTTTGC GTTTGGGCTATTTTA TERM 478 504220 - 504202 - T 80 -10.3 -3.75598 | opp_overlap 504194 504202 TAATTAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 479 504202 - 504220 + T 100 -10.3 -5.22039 | opp_overlap 504202, overlap 504194 TAATTAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 480 504356 - 504382 + T 72 -8.9 -3.35597 | gap 1, overlap 504331 504354 ACTTCGTCGATGTGG CCGTTAATTGCA TCCA TGCA-TTAACGG TATTTCCGCCATCCA TERM 481 505755 - 505738 - T 72 -8.5 -3.61178 | TTGAGTTATTCGAAA CTACTTC TCAC GAAGTAG TCAAAAATTTTACTC TERM 482 508247 - 508235 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 483 509045 - 509029 - T 75 -8 -4.08546 | overlap 509042 ATGAGTAACGATAAA GGGAGT GAAAA ACTCCC TCGCCGAAAGACCAA TERM 484 509552 - 509541 - T 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 485 510923 - 510957 + T 83 -12.3 -2.85366 | opp_overlap 510931, overlap 510931 CAGGCGCCTAATTAA GTGAAGAAGCCACCT GAATA AGGTGGCTTTTTTGC GTTTGGGCTTTTAAA TERM 486 510949 - 510931 - T 80 -10.3 -3.75598 | opp_overlap 510923 510931 TAATTAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 487 510931 - 510949 + T 100 -10.3 -5.22039 | opp_overlap 510931, overlap 510923 TAATTAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 488 511217 - 511253 + T 100 -15.4 -4.80882 | gap 1, opp_overlap 511224, overlap 511224 CAGGCGCCTAATAAA CG-AGAAAGCCCATTGC TAAC GCAATGGGCTTTTTTCG TTTTTAGTCTGGACT TERM 489 511245 - 511224 - T 100 -14.5 -4.20981 | opp_overlap 511217 511224 CTAATAAACGAGAAA GCCCATTGC TAAC GCAATGGGC TTTTTTCGTTTTTAG TERM 490 511224 - 511245 + T 100 -14.5 -5.54079 | opp_overlap 511224, overlap 511217 CTAATAAACGAGAAA GCCCATTGC TAAC GCAATGGGC TTTTTTCGTTTTTAG TERM 491 511314 - 511328 + T 77 -10 -3.28912 | opp_overlap 511313 511308 511306 GGGGAAATAGATAGC GCATGC GCA GCATGC TTCATCTCCATGTGG TERM 492 511483 - 511461 - T 91 -12 -3.94276 | opp_overlap 511461 AAAAGAGTCGATAAA TCCCCAGCAC TTC GTGTTGGGGA TTTTTTCGTTTAACG TERM 493 511461 - 511483 + T 100 -14.2 -5.37593 | opp_overlap 511461 AAAAGAGTCGATAAA TCCCCAGCAC TTC GTGTTGGGGA TTTTTTCGTTTAACG TERM 494 511540 - 511554 + T 72 -10 -2.55712 | opp_overlap 511539 511538 511536, overlap 511539 511538 GGGGAAGTAAATAGC GCATGC GAA GCATGC ATCTTATCCATGTGA TERM 495 511856 - 511877 + T 100 -15.9 -5.54079 | opp_overlap 511856 CCTAATAACGATAAA GCCCGTTGC TCAC GCAACGGGC TTTTTTCGTTTTTAG TERM 496 511877 - 511856 - T 100 -15.9 -4.14257 | opp_overlap 511856 CCTAATAACGATAAA GCCCGTTGC TCAC GCAACGGGC TTTTTTCGTTTTTAG TERM 497 512062 - 512050 - T 74 -4.8 -4.77036 | overlap 512052 GTTTAGGATTAAAAA TGCC TTGAT GGCA TGGATGCCAGAAAAA TERM 498 512370 - 512343 - T 70 -8.5 -3.27298 | GGTTGGAATGAGGAA GAGCCTAAGTC ATTTTG GAATTAGGCTC TGAAGTGACTTAAAG Ssed_0419 512769 - 512380 - | mutator MutT protein Ssed_0420 512985 - 512773 - | hypothetical protein Ssed_0421 513799 - 513065 - | hypothetical protein Ssed_0422 514413 - 513808 - | dephospho-CoA kinase Ssed_0423 515370 - 514459 - | prepilin peptidase TERM 499 515300 - 515288 - G 75 -5.5 -4.76075 | ACCACATTAAGAAAA CTGCC TAT GACAG CCGAAAAAATAAAAC TERM 500 515347 - 515329 - G 70 -9.6 -3.21993 | ACTGATAATACTGAA GAGCCAAA GGT TCTGGCTC AATATGGAGATAAAT Ssed_0424 516708 - 515443 - | type II secretion system protein TERM 501 516484 - 516502 + g 80 -8.2 -4.42765 | overlap 516485 GGCTGTAATTTTCTT TTCACTCT TGA AGAGTGAG TTTGCTTTTTTACGG TERM 502 516485 - 516501 + g 70 -9.5 -3.24575 | overlap 516484 GCTGTAATTTTCTTT TCACTCT TGA AGAGTGA GTTTGCTTTTTTACG Ssed_0425 518483 - 516774 - | type IV-A pilus assembly ATPase PilB TERM 503 518534 - 518508 - R 100 -12.4 -4.45771 | opp_overlap 518508 ACCTCAAAATAGAAA GATAAGAAGGCC ATT AGCCCTCTTATC TTTGATTATCTGGAT TERM 504 518508 - 518534 + r 86 -9.5 -4.04576 | opp_overlap 518508 ACCTCAAAATAGAAA GATAAGAAGGC CATTA GCCCTCTTATC TTTGATTATCTGGAT Ssed_0426 518966 - 518556 - | methylation site containing protein TERM 505 518909 - 518931 + g 73 -4.8 -4.8083 | opp_overlap 518912 518915, overlap 518911 CAACGATCATTAATT CAATAAGGGT GAA ACCCTTAGCG TTTTTCATACTCTTG TERM 506 518928 - 518912 - G 70 -9.5 -3.21695 | opp_overlap 518911 518909, overlap 518915 CGATCATTAATTCAA TAAGGGT GAA ACCCTTA GCGTTTTTCATACTC Ssed_0427 520624 - 519719 - | nicotinate-nucleotide diphosphorylase (carboxylating) TERM 507 520081 - 520091 + g 73 -3.2 -4.93877 | opp_overlap 520069 AAATACTGCCACAGG CCAT AAT GTGG TTTTCTTTAATGAGA Ssed_0428 520949 - 521566 + | N-acetyl-anhydromuranmyl-L-alanine amidase TERM 508 521892 - 521909 + G 78 -9.1 -4.08692 | overlap 521894 GTTCAAGTTGCCACG TGGGCCG TTGC CGGCCTA TTTTGGGGCGCGTTA TERM 509 521894 - 521907 + G 76 -9.5 -3.63922 | overlap 521892 TCAAGTTGCCACGTG GGCCG TTGC CGGCC TATTTTGGGGCGCGT Ssed_0429 521706 - 522557 + | regulatory protein AmpE TERM 510 522568 - 522584 + F 77 -5.2 -4.94058 | overlap 522552 CTTAGAGAGTCTACA GCTTAA TGAGT TTAAGC TTTTGTTTCAGTTAA TERM 511 523214 - 523261 + G 85 -10.8 -3.80573 | gap 1, overlap 523215 CTGGCAGATCCTATC GTCGAGTTGATGCATAGTGACTC CGA GAGTCAGTATG-ATCTACTCGAG TTTCGTCATGCTACC TERM 512 523215 - 523260 + G 88 -14.3 -2.88023 | gap 1, overlap 523214 TGGCAGATCCTATCG TCGAGTTGATGCATAGTGACTC CGA GAGTCAGTATG-ATCTACTCGA GTTTCGTCATGCTAC Ssed_0430 522956 - 523708 + | transcriptional regulator PdhR TERM 513 524978 - 524963 - g 73 -7.6 -4.08216 | TTATTCTTGCTAAAA CCGTAA AAGG TTACGG TATGGGTGACGCGGG Ssed_0431 523795 - 526461 + | pyruvate dehydrogenase subunit E1 TERM 514 528081 - 528100 + G 72 -5.7 -4.35644 | gap 1, opp_overlap 528080, overlap 528078 528083 528084 GACACTGTCAAGTAT GCTGTCCG ACATA CGGAC-GC TTATTTTGTAATGAT Ssed_0432 526474 - 528111 + | dihydrolipoyllysine-residue succinyltransferase TERM 515 528119 - 528139 + F 100 -14.1 -5.09762 | opp_overlap 528119 TTTTGTAATGATGAA GGCTACTCA TGT TGAGTAGCC TTTTGTTTATTGCAA TERM 516 528139 - 528119 - f 100 -14.1 -3.27298 | opp_overlap 528119 TTTTGTAATGATGAA GGCTACTCA TGT TGAGTAGCC TTTTGTTTATTGCAA TERM 517 528323 - 528345 + G 71 -8.4 -3.7108 | overlap 528310 GGTCCTGCTGGTTAT TCAGCGGCAT TTC GTGCGGCTGA TTTAGGTCTGGAAGT TERM 518 528563 - 528540 - g 72 -6 -4.42806 | opp_overlap 528540, overlap 528542 GTAGCTTTAAAGAAA CGGTGATTAG TCAG CTAACCACAG GTTTGGGCGGAATGT Ssed_0433 528266 - 529693 + | dihydrolipoamide dehydrogenase TERM 519 529714 - 529729 + F 100 -10.4 -5.95166 | opp_overlap 529714 CACAGAACTGATAAA GCGCTC TTTT GAGCGC TTTTTTTTGATTGCG TERM 520 529729 - 529714 - f 86 -10.4 -4.01137 | opp_overlap 529714 CACAGAACTGATAAA GCGCTC TTTT GAGCGC TTTTTTTTGATTGCG TERM 521 530841 - 530882 + G 77 -10.3 -3.53811 | opp_overlap 530855 530872, overlap 530837 530843 GACAGGTTCACTATG TCTGAGCCATATCATCTCA GCAA TGAGATGATATGGACCATA TTTGCGGAAGATGAA TERM 522 530843 - 530880 + G 87 -12.9 -3.34715 | opp_overlap 530855 530872, overlap 530837 530841 CAGGTTCACTATGTC TGAGCCATATCATCTCA GCAA TGAGATGATATGGACCA TATTTGCGGAAGATG TERM 523 531889 - 531907 + G 74 -9.6 -3.52896 | CGAGACTGATTAGTT TCCAGGTT ACC AGCCTGGA TTATCTCGATGATAC Ssed_0434 529824 - 534281 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 524 534580 - 534553 - g 70 -7.8 -3.84406 | gap 1, overlap 534550 GCTCGAGGAGAACAA GATTCCTGTCGAC TAT ATCG-CAGGAACC AGCATCGGCGCATAT TERM 525 536138 - 536148 + G 91 -6.8 -5.2696 | opp_overlap 536137 TATTACAGAAACGAG TCGG CGC CCGA TTTTTTAGGTTTTGA Ssed_0435 534359 - 536614 + | patatin TERM 526 538612 - 538636 + G 79 -11.5 -3.15249 | TCATTGAAGGTTTAA CCGGTGAACAG CGT CTGTTTATCGG TTGGTCGCAAGTATG Ssed_0436 536775 - 538829 + | endothelin-converting protein 1 TERM 527 538927 - 538892 - T 100 -17.9 -3.80018 | opp_overlap 538892 538895, overlap 538895 GGTAGAGAGTAATAA TAAGTAAGCCCATCT TTTTTT AGATGGGCTTACTTA TTTCAAACAGACAAA TERM 528 538892 - 538927 + T 100 -17.9 -3.53012 | opp_overlap 538892 538895, overlap 538895 GGTAGAGAGTAATAA TAAGTAAGCCCATCT TTTTTT AGATGGGCTTACTTA TTTCAAACAGACAAA TERM 529 538924 - 538895 - T 100 -15.2 -4.02163 | opp_overlap 538895 538892, overlap 538892 AGAGAGTAATAATAA GTAAGCCCATCT TTTTTT AGATGGGCTTAC TTATTTCAAACAGAC TERM 530 538895 - 538924 + T 100 -15.2 -3.90744 | opp_overlap 538892 538895, overlap 538892 AGAGAGTAATAATAA GTAAGCCCATCT TTTTTT AGATGGGCTTAC TTATTTCAAACAGAC Ssed_0437 539798 - 539133 - | 2-deoxyglucose-6-phosphatase TERM 531 540838 - 540825 - g 74 -3.1 -5.05782 | opp_overlap 540825 AGCTATGCTAAAAAA TACCC GTGA AGGTA TTGTGCCCGATGAGG TERM 532 541550 - 541566 + G 72 -10.9 -2.5655 | opp_overlap 541549, overlap 541549 CTTTCTGTCACACAG CGGCTTA TCC TAAGCCG GTTGATGTGAATACG Ssed_0438 540214 - 542811 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 533 542921 - 542948 + T 100 -15.8 -5.4756 | opp_overlap 542921 CGAACCAACAAAAAA GGCTAGATTCAT ACCG ATGAATCTAGCC TTTTTTATTAAGCTT TERM 534 542948 - 542921 - T 100 -15.8 -5.5604 | opp_overlap 542921 CGAACCAACAAAAAA GGCTAGATTCAT ACCG ATGAATCTAGCC TTTTTTATTAAGCTT Ssed_0439 543464 - 542997 - | anti-RNA polymerase sigma 70 factor TERM 535 543662 - 543633 - H 100 -16.5 -5.43553 | opp_overlap 543626, overlap 543634 AGCCAAAAAATAAAA TGCCCAGCGATAG AATG CTATCGCTGGGCG AGTAAAGGTTTTGCA TERM 536 543661 - 543634 - H 100 -20 -3.83692 | opp_overlap 543626, overlap 543633 GCCAAAAAATAAAAT GCCCAGCGATAG AATG CTATCGCTGGGC GAGTAAAGGTTTTGC Ssed_0440 543991 - 545055 + | uroporphyrinogen decarboxylase TERM 537 545084 - 545114 + F 95 -13.4 -3.45945 | opp_overlap 545090, overlap 545090 GTACTCTTGTTGTGT TAATAAGGCTCGCA TAT TGCGGGCCTTTTTA TTGATTATGGCTAAG TERM 538 545090 - 545108 + F 100 -12.4 -5.2204 | opp_overlap 545090, overlap 545084 TTGTTGTGTTAATAA GGCTCGCA TAT TGCGGGCC TTTTTATTGATTATG TERM 539 545108 - 545090 - f 79 -10.2 -3.61398 | opp_overlap 545090 545084 TTGTTGTGTTAATAA GGCTCGCA TAT TGCGGGCC TTTTTATTGATTATG TERM 540 547573 - 547583 + G 71 -8.2 -3.62275 | opp_overlap 547572 CCCAGTTTATTGAAG CCGC TGA GCGG TTTAAGCTAATGAAT Ssed_0441 545598 - 548210 + | sensory box protein TERM 541 548332 - 548301 - T 100 -19 -4.63218 | opp_overlap 548297 TTTCGTTGAATAAAA TAAGGCCTGATACT CGAG AGTATCAGGCCTTA AAAGTCTATGGCGGC Ssed_0442 551380 - 548378 - | hypothetical protein TERM 542 549261 - 549277 + g 73 -7.9 -4.07618 | opp_overlap 549233, overlap 549262 549264 TCAGTTACCTGTACC TGAGCCG AAC CGGCTCC TTTAATTGTTAGCGC TERM 543 549262 - 549276 + g 78 -11.4 -3.04089 | opp_overlap 549233, overlap 549261 549264 CAGTTACCTGTACCT GAGCCG AAC CGGCTC CTTTAATTGTTAGCG TERM 544 550055 - 550030 - G 73 -10.5 -3.24924 | opp_overlap 550028 550031 550032, overlap 550028 GCGGTATGTAGAACA GATCACCGTCA TCGG TGACTGTGATC TCTGCCTTACCGGGT TERM 545 550777 - 550761 - G 70 -9.5 -3.25942 | ATGTCTCGATAGGAA GCAAACT GCG AGTTTGC GGCTTCGACGGTAAT TERM 546 551552 - 551589 + r 100 -15.2 -3.33671 | opp_overlap 551552 551556, overlap 551556 TCAGCCCTTAAAAAA TAAAGCACCTGATATC AGTAGG GATATTAGGTGCTTTA TTATGCAGTAAGTCT TERM 547 551589 - 551552 - R 100 -13 -5.02074 | opp_overlap 551552 551556, overlap 551556 TCAGCCCTTAAAAAA TAAAGCACCTGATATC AGTAGG GATATTAGGTGCTTTA TTATGCAGTAAGTCT TERM 548 551556 - 551585 + r 93 -11.6 -4.32177 | opp_overlap 551552 551556, overlap 551552 CCCTTAAAAAATAAA GCACCTGATATC AGTAGG GATATTAGGTGC TTTATTATGCAGTAA TERM 549 551585 - 551556 - R 93 -9.4 -5.04249 | opp_overlap 551556 551552, overlap 551552 CCCTTAAAAAATAAA GCACCTGATATC AGTAGG GATATTAGGTGC TTTATTATGCAGTAA Ssed_0443 552978 - 551686 - | phosphoribosylamine--glycine ligase TERM 550 553011 - 553050 + r 91 -12.2 -3.90241 | opp_overlap 553022 AGTTCTTAGGATCGA GGAGCTAGGAACTAGG AACTAAAC CCTAGAACCTAGCTCC TTCTTATCATTAATG Ssed_0444 554664 - 553060 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 551 554932 - 554948 + H 74 -6.5 -4.41616 | GACGGCTAATTTGTG CAGAGCG TCA CACTCTG TTTATTTAAAAGGGT TERM 552 555192 - 555221 + H 73 -7.1 -3.98913 | overlap 555193 TTGAACTCTGTTACT TCTCGACATGCTG AATC CTGCATTTCGAGG TTGTTTGGGTATAAC Ssed_0445 555335 - 555814 + | zinc-responsive transcriptional regulator Ssed_0446 555817 - 557118 + | permease TERM 553 557147 - 557163 + F 100 -9.4 -5.4833 | opp_overlap 557145 557143 557147 CGGTTTTAAAAGAGA GGGCCT TTGAT AGGCCC TTTTTTATTACCTAA TERM 554 557163 - 557147 - f 75 -9.4 -3.39908 | opp_overlap 557147, overlap 557145 557143 CGGTTTTAAAAGAGA GGGCCT TTGAT AGGCCC TTTTTTATTACCTAA Ssed_0447 557633 - 559471 + | hypothetical protein TERM 555 559600 - 559615 + F 100 -11.8 -5.24796 | TGTTCAGTTTGCCAA GGGCCC TGCG GGGCCC TTTTTGTTGTCTGGA TERM 556 561735 - 561725 - g 74 -2.6 -5.1356 | TTTTAGCAAGAAAAA TAAT CGT ATTA CGGCATCGGAAGCCT Ssed_0448 559788 - 561824 + | peptidase TERM 557 561852 - 561895 + T 84 -8.2 -4.67011 | opp_overlap 561860 561865, overlap 561859 561860 561865 CAGTTTAAAATTGGT TTGAAATAGAAAAGGCACTC AATT GAGTGCCTTTTCGTTTGCTA TTTTTAGCTGGCCTT TERM 558 561859 - 561888 + T 100 -13.7 -4.13748 | opp_overlap 561860 561865, overlap 561852 561860 561865 AAATTGGTTTGAAAT AGAAAAGGCACTC AATT GAGTGCCTTTTCG TTTGCTATTTTTAGC TERM 559 561887 - 561860 - T 100 -17.2 -3.34894 | opp_overlap 561859 561852 561860 561865, overlap 561865 AATTGGTTTGAAATA GAAAAGGCACTC AATT GAGTGCCTTTTC GTTTGCTATTTTTAG TERM 560 561860 - 561887 + T 100 -17.2 -3.07164 | opp_overlap 561860 561865, overlap 561859 561852 561865 AATTGGTTTGAAATA GAAAAGGCACTC AATT GAGTGCCTTTTC GTTTGCTATTTTTAG TERM 561 561882 - 561865 - T 95 -11.3 -4.78848 | opp_overlap 561860 561859 561852 561865, overlap 561860 GTTTGAAATAGAAAA GGCACTC AATT GAGTGCC TTTTCGTTTGCTATT TERM 562 561865 - 561882 + T 93 -11.3 -4.61284 | opp_overlap 561865 561860, overlap 561860 561859 561852 GTTTGAAATAGAAAA GGCACTC AATT GAGTGCC TTTTCGTTTGCTATT Ssed_0449 562967 - 561951 - | putative lipoprotein Ssed_0450 564059 - 563331 - | hypothetical protein Ssed_0451 565103 - 564174 - | LysR family transcriptional regulator TERM 563 565015 - 565034 + g 75 -7.9 -4.25283 | overlap 565004 TTTCGGCTAACCGTA GCCTTAG TTAATC CTAAGGC TTTTGCTGCCCCGGT Ssed_0452 565201 - 566259 + | secretion protein HlyD family protein Ssed_0453 566263 - 567843 + | EmrB/QacA family drug resistance transporter Ssed_0454 567971 - 568426 + | GCN5-related N-acetyltransferase TERM 564 568465 - 568446 - T 93 -10 -5.09762 | opp_overlap 568446 CCGGAATAAATAAAA GGAGCACT TTTC AGCGCTCC TTTCTGAGTAATAAT TERM 565 568446 - 568465 + T 73 -7.8 -3.93963 | opp_overlap 568446 CCGGAATAAATAAAA GGAGCACT TTTC AGCGCTCC TTTCTGAGTAATAAT Ssed_0455 568744 - 568499 - | hypothetical protein TERM 566 568765 - 568780 + H 80 -6.1 -4.67982 | TTATCTTTACGTATG CAGGC CGATGC GCCTG TTTTCTTCACTGCCC TERM 567 569663 - 569677 + G 73 -10 -3.28791 | opp_overlap 569659 569660 569663 ATGATTTTAAATGGA CTCGGT GGC ACCGAG TTATCAACGCAACAT Ssed_0456 569096 - 570025 + | radical SAM domain-containing protein TERM 568 570065 - 570039 - T 90 -12.4 -3.60098 | AGCCCTCACTTTAAA TCTTGCCCTGAA CTT TTTAGGGCAAGA TCCAGCGGAAAAACA Ssed_0457 570921 - 570088 - | MscS mechanosensitive ion channel TERM 569 571542 - 571525 - g 71 -4.9 -4.56597 | gap 1, opp_overlap 571538 TTGCCTTCCGAAAAA GATC-AGG CAA CCTTGATC AAGTTAGATCATTTA Ssed_0458 571153 - 571617 + | hypothetical protein TERM 570 571645 - 571674 + T 80 -10.2 -3.76224 | opp_overlap 571645 571652, overlap 571652 CTCGTTAAACAGATA TAAAAAATGGGC TTAATT GCCCATTTTTTG TTTACTAACTCAAAC TERM 571 571667 - 571652 - T 91 -6.1 -5.46276 | opp_overlap 571645 571652, overlap 571645 AACAGATATAAAAAA TGGGC TTAATT GCCCA TTTTTTGTTTACTAA TERM 572 571652 - 571667 + T 95 -6.1 -5.68438 | opp_overlap 571652 571645, overlap 571645 AACAGATATAAAAAA TGGGC TTAATT GCCCA TTTTTTGTTTACTAA Ssed_0459 571919 - 571698 - | hypothetical protein Ssed_0460 571921 - 572160 + | hypothetical protein Ssed_0461 572328 - 573086 + | uridine phosphorylase TERM 573 573164 - 573138 - T 93 -13.8 -3.17392 | opp_overlap 573144, overlap 573144 GATGGTTTAAGTTAA TAAAAAGGCGCC TTA GGCGCCTTTTTT GATCTGACTTCTCAA TERM 574 573158 - 573144 - T 100 -12.8 -5.13741 | opp_overlap 573144, overlap 573138 TTAAGTTAATAAAAA GGCGCC TTA GGCGCC TTTTTTGATCTGACT TERM 575 573144 - 573158 + T 100 -12.8 -5.22312 | opp_overlap 573138 573144 TTAAGTTAATAAAAA GGCGCC TTA GGCGCC TTTTTTGATCTGACT Ssed_0462 573971 - 573219 - | hypothetical protein TERM 576 574118 - 574090 - H 70 -8.1 -3.75629 | overlap 574091 TACGGCGAAGCTAAA TTGAGATGGCTGC TGA GCATCCACCTCAT AGGGCGGAGAATATA TERM 577 574117 - 574091 - H 80 -11.6 -2.85056 | overlap 574090 ACGGCGAAGCTAAAT TGAGATGGCTGC TGA GCATCCACCTCA TAGGGCGGAGAATAT Ssed_0463 574310 - 574783 + | hypothetical protein TERM 578 574918 - 574929 + G 74 -3 -5.00846 | GGAAGGAATCTATGT TTGT ATTT ACAA TTTTTGTCCTGTTTA TERM 579 575026 - 575041 + G 78 -6 -4.79384 | overlap 575022 TGGGTAAATTTCGGG CCGTGC TTAA GCCCGG TTTTCATTTTCTTAT Ssed_0464 574914 - 575861 + | band 7 protein Ssed_0465 575858 - 576793 + | band 7 protein Ssed_0466 577508 - 577861 + | L-PSP family endoribonuclease TERM 580 577886 - 577864 - f 73 -5.6 -4.53036 | opp_overlap 577859 577868, overlap 577859 577866 577883 TGAGAAAGATTAAAA CAGGTTTTAG TTT CTAGAACCTA GATCCTAGGATCTCG TERM 581 577912 - 577887 - f 72 -10.5 -2.5955 | opp_overlap 577868, overlap 577883 577908 AGTTTCTAGAACCTA GATCCTAGGAT CTCG AACCTAGGATC TCATCCCCCGCACCT Ssed_0467 577962 - 580127 + | DNA-dependent helicase II Ssed_0468 580211 - 581071 + | 4-hydroxybenzoate octaprenyltransferase TERM 582 581181 - 581201 + F 86 -7.5 -5.02074 | opp_overlap 581179 581183 TTATCTAAATTGAGA GAGGTCTGA TAG TCTGGCCTC TTTTTTCACAGCTCG Ssed_0469 581370 - 582482 + | hypothetical protein Ssed_0470 583368 - 582559 - | transposase TERM 583 583431 - 583449 + r 76 -4.5 -5.07567 | overlap 583433 TTATCCCTGGTGTTT GTCGAAG AACTC CTTCGCC TTTTTTAAGATATCG Ssed_0471 583730 - 583416 - | transposase IS3/IS911 TERM 584 583812 - 583796 - H 71 -9.5 -2.87564 | TTAGGCGGCCATATA GTTAGAC TTC GTCTAAC AACTAAGGTCGTGGG TERM 585 583943 - 583919 - H 72 -8.5 -3.53444 | TCGTCTAATAACTAA GGTCGTGGGTC TTC AACCCACACCC GACCAAGGAGGACTG TERM 586 584961 - 584950 - g 81 -3.6 -5.47431 | GCAAGATATAAAAAA GCAG ATAA CCGC TTTGTCACTTTTGAT Ssed_0472 584339 - 585871 + | hypothetical protein TERM 587 586128 - 586151 + T 72 -9 -3.30124 | gap 1 AGTCCTCCTTGCCCT GGT-GTGGAAT GGA ATTCCACGACC TTCTCGGCCGTAAGG Ssed_0473 586804 - 586226 - | hypothetical protein TERM 588 586598 - 586615 + g 74 -9.1 -3.67775 | opp_overlap 586598 586594 AAGGACATAAACAGA GTCGACG ATGG CGTCGGC TTGTTCCATGCGGGT Ssed_0474 587186 - 586959 - | hypothetical protein TERM 589 587516 - 587490 - H 70 -5.8 -4.46212 | overlap 587491 587493 CCTCGTAGGAGAAAA CCACCGGAAGAG TGG CTCTTACGGCAA GTCAATTACGCTCCA TERM 590 587513 - 587493 - H 73 -9.7 -3.20028 | overlap 587491 587490 CGTAGGAGAAAACCA CCGGAAGAG TGG CTCTTACGG CAAGTCAATTACGCT TERM 591 588088 - 588112 + G 73 -7.8 -4.11394 | overlap 588090 GTGTCGAAATTACCG CAGGCGCCAT CATCA GTGGCGCCTA TTTTGGCGATAAGAT TERM 592 588090 - 588110 + G 79 -10.4 -3.65542 | overlap 588088 GTCGAAATTACCGCA GGCGCCAT CATCA GTGGCGCC TATTTTGGCGATAAG Ssed_0475 587565 - 589082 + | Na+/H+ antiporter NhaC TERM 593 589123 - 589088 - T 100 -19.2 -3.66288 | opp_overlap 589089, overlap 589089 GATTGCGTAAGAGAA GGTTCCTGGAACCTAG GGAT CTAGGTTCCAGGAACT TGTTAAATTATAATC TERM 594 589122 - 589089 - T 100 -22.7 -2.79452 | opp_overlap 589089, overlap 589088 ATTGCGTAAGAGAAG GTTCCTGGAACCTAG GGAT CTAGGTTCCAGGAAC TTGTTAAATTATAAT TERM 595 589089 - 589122 + T 100 -22.7 -3.76168 | opp_overlap 589089 589088 ATTGCGTAAGAGAAG GTTCCTGGAACCTAG GGAT CTAGGTTCCAGGAAC TTGTTAAATTATAAT Ssed_0476 591197 - 589131 - | peptidase S9 prolyl oligopeptidase TERM 596 591404 - 591420 + G 85 -2.9 -5.54192 | opp_overlap 591404 GCCAATATGCAGAAA CTGATGA AGA TCAGCGG TTTTTTTAGGTTGCT Ssed_0477 591383 - 591898 + | hypothetical protein Ssed_0478 591917 - 592129 + | XRE family transcriptional regulator Ssed_0479 592854 - 592264 - | thioredoxin, putative Ssed_0480 593263 - 592835 - | cytochrome c biogenesis protein Ssed_0481 595230 - 593260 - | cytochrome c-type biogenesis protein CcmF TERM 597 593894 - 593917 + g 72 -11 -2.73124 | opp_overlap 593894, overlap 593893 AGCCAGATATTAAAA CCTGAGCCTG TCAG CATGCTCAGG GTTTCGGCGATGGCG TERM 598 593917 - 593894 - G 91 -11 -4.39568 | opp_overlap 593894 593893 AGCCAGATATTAAAA CCTGAGCCTG TCAG CATGCTCAGG GTTTCGGCGATGGCG TERM 599 594464 - 594441 - G 75 -8.1 -4.18018 | GCCTGTGACTCAAAA CCACCGAGT GTAGTA ACGCGGTGG CGACCAGCCATGGAA Ssed_0482 595777 - 597813 + | cytochrome c, putative Ssed_0483 597859 - 598314 + | rhodanese domain-containing protein TERM 600 599033 - 599047 + G 71 -4.3 -4.66833 | TTGGCATGATATCTC CTAAC TCAGC GTTAG TTTTTGAAGTTGAGC Ssed_0484 598369 - 599157 + | peptidylprolyl isomerase, FKBP-type Ssed_0485 599191 - 599898 + | cytochrome c biogenesis factor-like protein TERM 601 600182 - 600159 - g 72 -11 -2.57013 | overlap 600155 CCCGAAGGTAAGTCA CGACTCCTGC TTGA GCAGCAGTCG GGTGGCGTAGTGGGT Ssed_0486 599949 - 600653 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_0487 600656 - 601603 + | polysulphide reductase, NrfD Ssed_0488 601920 - 602420 + | NosL family protein TERM 602 603689 - 603718 + G 71 -8.5 -3.76952 | overlap 603690 ATGAATAGCCCGGTG GTGGCTCTGCTTC GATG GGTGCAGAGCCAA TTTGAATTCGGTGAA TERM 603 603690 - 603717 + G 80 -12 -2.8585 | overlap 603689 TGAATAGCCCGGTGG TGGCTCTGCTTC GATG GGTGCAGAGCCA ATTTGAATTCGGTGA Ssed_0489 602567 - 603799 + | periplasmic copper-binding Ssed_0490 603793 - 604701 + | ABC transporter-related protein Ssed_0491 604714 - 605553 + | copper ABC transporter, permease protein Ssed_0492 605844 - 607127 + | transcriptional regulator, CadC TERM 604 607161 - 607179 + F 100 -10.3 -5.4251 | CATTTGGCCTGTGAA GCCCGTA TCGAT TACGGGC TTTTTTGTATGTGGC TERM 605 607547 - 607565 + F 91 -6 -5.50499 | TAAATATTGGTTTTA CATCTGAT TGA ATCTGATG TTTTTTTAAGTGTGC TERM 606 607581 - 607591 + F 74 -4 -5.04265 | overlap 607578 TTTTTTTAAGTGTGC TTTG AAG CAAA TTTTTACTGTTTTTT TERM 607 609417 - 609405 - g 80 -9.1 -4.30719 | overlap 609407 GTGGTTGAGAACAAA GGCTG TCA CAGCC AGTTCCAGTCTGAAC Ssed_0493 607731 - 609761 + | cytochrome c, putative Ssed_0494 609839 - 610267 + | hypothetical protein Ssed_0495 610330 - 611121 + | peptidylprolyl isomerase, FKBP-type Ssed_0496 611182 - 611904 + | TPR repeat-containing protein Ssed_0497 611968 - 612678 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_0498 612681 - 613628 + | polysulphide reductase, NrfD Ssed_0499 613800 - 614288 + | NosL protein TERM 608 614668 - 614657 - g 71 -7.2 -4.00445 | opp_overlap 614657 CAGCATCAATAATAA CCGG CTAT CCGG AGACGGTTTCGGCAT Ssed_0500 614295 - 615584 + | periplasmic copper-binding TERM 609 615766 - 615797 + G 81 -9.7 -4.07885 | gap 1, overlap 615767 AAAGATCTTGCTCGG T-TTGATCACACCT ACTGG AGGTGTGATCAATA TTTTAGGGCGGAATA TERM 610 615767 - 615795 + G 95 -14.8 -3.63744 | overlap 615766 AAGATCTTGCTCGGT TTGATCACACCT ACTGG AGGTGTGATCAA TATTTTAGGGCGGAA TERM 611 616209 - 616234 + G 71 -10.5 -2.89564 | gap 1, opp_overlap 616204 AAAACAATATCGATA CCG-CCCTTATC TTA GGTAAGGGTCGG TGTCTGGCATCCGGG Ssed_0501 615611 - 616513 + | ABC transporter-related protein Ssed_0502 616515 - 617345 + | copper ABC transporter, permease protein Ssed_0503 617625 - 618908 + | transcriptional regulator, CadC TERM 612 618950 - 618997 + T 72 -10.1 -2.72364 | gap 2, overlap 618949 CGCCTGCGAGTTCGG GCTACGCCTTACGAGAAAAAAGC ATTG GCTCTTTTCTCGT-A-GCGAAGC GTTCTCGTTACTCGT Ssed_0504 619751 - 619041 - | FMN reductase Ssed_0505 621313 - 619832 - | UbiD family decarboxylase TERM 613 621026 - 621014 - G 71 -9.1 -3.54129 | TATAGCGTCTTTAAA GCCAC GTG GTGGC TCAGGCTCCTTCAGG TERM 614 621537 - 621553 + H 75 -7.9 -4.09685 | opp_overlap 621537 621539 GTAGGCAGCCCAAAA CACGCCT AAC AGGCGAG TTTTAGCGCATCCGA TERM 615 621553 - 621537 - H 77 -7.9 -4.14739 | opp_overlap 621537, overlap 621539 GTAGGCAGCCCAAAA CACGCCT AAC AGGCGAG TTTTAGCGCATCCGA TERM 616 621551 - 621539 - H 76 -9.1 -3.67188 | opp_overlap 621537, overlap 621537 AGGCAGCCCAAAACA CGCCT AAC AGGCG AGTTTTAGCGCATCC Ssed_0506 621781 - 622272 + | hypothetical protein TERM 617 622643 - 622657 + F 71 -7.2 -3.83375 | overlap 622640 ATGATTTCTGTTTAA TTGTCA GGA TGACAA TTGTATTCATTTTAA Ssed_0507 622689 - 622946 + | toxin secretion, membrane fusion protein TERM 618 623567 - 623585 + F 76 -4.6 -5.03715 | overlap 623571 TGGACATGCCTGTAT TGAACTCT AGG AGGGTTTA TTTTTTACAGGTAAT TERM 619 623571 - 623581 + F 72 -3.2 -5.04249 | overlap 623567 CATGCCTGTATTGAA CTCT AGG AGGG TTTATTTTTTACAGG Ssed_0508 623989 - 624969 + | putative CheW protein Ssed_0509 625547 - 625017 - | GCN5-related N-acetyltransferase Ssed_0510 626637 - 626137 - | putative lipoprotein TERM 620 626842 - 626881 + H 72 -4.4 -4.72272 | gap 1, overlap 626845 AACACTCGCCAATAC TTACTACTATCTATAGCCA CAA TGGC-GTAGATAGAGGTTA TTTTTAGTCCCCCCC TERM 621 626845 - 626878 + H 74 -6.1 -4.47707 | gap 1, overlap 626842 ACTCGCCAATACTTA CTACTATCTATAGCCA CAA TGGC-GTAGATAGAGG TTATTTTTAGTCCCC Ssed_0511 627002 - 628204 + | putative tyrosine-specific transport protein TERM 622 628487 - 628464 - f 100 -16.8 -3.28912 | opp_overlap 628464 CCACATTCAGATGAA GCCCCAAGCA GAAA TGCTTGGGGC TTTTTCGTATATTCA TERM 623 628464 - 628487 + F 100 -16.8 -4.87807 | opp_overlap 628464 CCACATTCAGATGAA GCCCCAAGCA GAAA TGCTTGGGGC TTTTTCGTATATTCA TERM 624 628565 - 628586 + F 100 -14.5 -4.82667 | opp_overlap 628565 CCATATTAAGATGAA GGGCTACTC GAAA GAGTAGCCC TTTTTCGTATACTCA TERM 625 628586 - 628565 - f 100 -14.5 -3.40907 | opp_overlap 628565 CCATATTAAGATGAA GGGCTACTC GAAA GAGTAGCCC TTTTTCGTATACTCA TERM 626 628688 - 628661 - f 90 -12.8 -3.7732 | opp_overlap 628663, overlap 628663 GCGCCACATTAAGAA GAGCCCGATATC GAAA GATATCGGGCTT TTTGCTAACTATAGC TERM 627 628663 - 628686 + F 100 -15.4 -4.76041 | opp_overlap 628661 628663 GCCACATTAAGAAGA GCCCGATATC GAAA GATATCGGGC TTTTTGCTAACTATA TERM 628 628686 - 628663 - f 100 -15.4 -3.46982 | opp_overlap 628663, overlap 628661 GCCACATTAAGAAGA GCCCGATATC GAAA GATATCGGGC TTTTTGCTAACTATA TERM 629 629409 - 629419 + G 70 -2.4 -4.87803 | AAGTTACTATCGGTG AGGG GAG CCCG TTTTCTTTCGAACTA Ssed_0512 629048 - 629992 + | transcriptional regulator-like protein Ssed_0513 630551 - 631477 + | cytochrome c, putative Ssed_0514 631488 - 632033 + | hypothetical protein TERM 630 632113 - 632080 - T 75 -10.3 -3.2128 | opp_overlap 632082 632086, overlap 632086 AAAGAGTTAAGGCAA CTGAAACCACGGCTC CCCT GAGCGGTGGTTTCTA TATTCTGGTGACTTG TERM 631 632082 - 632111 + T 100 -15.1 -3.2059 | opp_overlap 632080 632086, overlap 632086 AGAGTTAAGGCAACT GAAACCACGGCTC CCCT GAGCGGTGGTTTC TATATTCTGGTGACT TERM 632 632107 - 632086 - T 80 -10.1 -3.78409 | opp_overlap 632082 632086, overlap 632080 TTAAGGCAACTGAAA CCACGGCTC CCCT GAGCGGTGG TTTCTATATTCTGGT TERM 633 632086 - 632107 + T 89 -10.1 -4.25389 | opp_overlap 632086 632080, overlap 632082 TTAAGGCAACTGAAA CCACGGCTC CCCT GAGCGGTGG TTTCTATATTCTGGT TERM 634 632384 - 632404 + T 100 -9.7 -5.54885 | opp_overlap 632384 TCACCGACTGTTAAA GCCCCAGTT AAA GATTGGGGC TTTTTTATTGCTGTT TERM 635 632861 - 632875 + T 77 -10 -3.41051 | TGACTGTTCATCAGT GGACTG CCT CAGTCC TTATGCTAAAAATAA TERM 636 632918 - 632894 - T 100 -7.9 -5.61881 | overlap 632895 TGCTAAAAATAAAAA TGTCACTCTAC AGA ATAGAGTGACT AACCCATTTGGAGGT TERM 637 632917 - 632895 - T 90 -11.4 -3.95502 | overlap 632894 GCTAAAAATAAAAAT GTCACTCTAC AGA ATAGAGTGAC TAACCCATTTGGAGG TERM 638 633074 - 633043 - T 79 -9 -3.93026 | opp_overlap 633043 633047 AACACTTCAACGAAA TTAATTAGCCAT GATGAGGT ATGGCTAATTAA TTCATTCATTGCACG TERM 639 633043 - 633074 + T 77 -9.7 -3.45366 | opp_overlap 633043, overlap 633047 AACACTTCAACGAAA TTAATTAGCCATG ATGAGG TATGGCTAATTAA TTCATTCATTGCACG Ssed_0515 633397 - 633107 - | hypothetical protein Ssed_0516 634361 - 633420 - | formate-dependent nitrite reductase, nrfD protein TERM 640 633947 - 633911 - G 73 -9.6 -3.28524 | gap 1, opp_overlap 633910 633941, overlap 633909 633914 633923 AAGCACCTAAAGATA GAG-CTAGCATAACTAG CAAT CCAGTGATGCTAGGCTC ATGCTTATCTAATAT Ssed_0517 635047 - 634358 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_0518 635530 - 635060 - | hypothetical protein TERM 641 635605 - 635577 - R 71 -6.2 -4.15899 | gap 1, opp_overlap 635577 AAAAACATTAAATAA CAGTACTAAATCA ATGG TG-TTTAGTACCG CTTAATATCAGGCAA Ssed_0519 636107 - 635613 - | hypothetical protein Ssed_0520 636590 - 637555 + | LysR family transcriptional regulator Ssed_0521 638084 - 637776 - | hypothetical protein TERM 642 638153 - 638186 + H 72 -8.9 -3.42346 | gap 1, opp_overlap 638161 638163, overlap 638161 ACGCAGAAGTAGGCA GC-CAAAAACACGCCT AAC AGGCGAGTTTTAGCGC TTCTGATGCGGTGTT TERM 643 638177 - 638161 - H 84 -7.9 -4.67353 | opp_overlap 638153 638161, overlap 638163 GTAGGCAGCCAAAAA CACGCCT AAC AGGCGAG TTTTAGCGCTTCTGA TERM 644 638161 - 638177 + H 77 -7.9 -4.1585 | opp_overlap 638161 638163, overlap 638153 GTAGGCAGCCAAAAA CACGCCT AAC AGGCGAG TTTTAGCGCTTCTGA TERM 645 638175 - 638163 - H 79 -9.1 -3.95214 | opp_overlap 638161 638153, overlap 638161 AGGCAGCCAAAAACA CGCCT AAC AGGCG AGTTTTAGCGCTTCT Ssed_0523 638859 - 639029 + | hypothetical protein Ssed_0524 640302 - 639199 - | methyl-accepting chemotaxis protein TERM 646 639663 - 639689 + g 77 -3.9 -5.00895 | gap 1, overlap 639667 CCGATATATCAGCTG CATACAATTGGT TTTC ACTAATTG-ATG TTTTTATCTCATGAG TERM 647 639820 - 639795 - G 81 -12.6 -2.72344 | overlap 639802 639803 CCTCATCGGCAACCA CGGCAAAGCC TCGTCC GGCTTCGCCG GCACGTGCGGCCTCA TERM 648 640180 - 640190 + g 71 -4 -4.74706 | TAATTTATTATGTTC GAAA TCC TTTC TTTTTAACTCTTCGA Ssed_0525 640603 - 641556 + | Nitrilase Ssed_0526 642463 - 641660 - | hypothetical protein TERM 649 642481 - 642507 + r 71 -7.3 -3.93583 | opp_overlap 642484 642486, overlap 642484 642486 TGACTCCCCGACTAT ATAGAGGAAGG AGTTC CCTTCCTCTGA TTTATAAATGAATTA TERM 650 642484 - 642504 + r 81 -11.2 -3.02745 | opp_overlap 642484 642486, overlap 642481 642486 CTCCCCGACTATATA GAGGAAGG AGTTC CCTTCCTC TGATTTATAAATGAA TERM 651 642504 - 642484 - R 82 -11.9 -2.94099 | opp_overlap 642484 642481 642486, overlap 642486 CTCCCCGACTATATA GAGGAAGGA GTT CCCTTCCTC TGATTTATAAATGAA Ssed_0527 644379 - 642520 - | hypothetical protein TERM 652 644509 - 644528 + r 76 -7.2 -4.17296 | TTTTTCATCTGTTTT TTGCCATA TGGG TATGGCGA TTTCTCTCTGTGAAG Ssed_0528 645162 - 644770 - | hypothetical protein TERM 653 645316 - 645288 - R 100 -17.6 -3.35679 | opp_overlap 645288 645290 645294, overlap 645294 TTTGGGTATCGATAA CACTAATCCGGC ATGAG GCCGGATTAGTG TGATTCCACGTCATA TERM 654 645288 - 645316 + r 100 -17.6 -2.72661 | opp_overlap 645288 645294, overlap 645290 645294 TTTGGGTATCGATAA CACTAATCCGGC ATGAG GCCGGATTAGTG TGATTCCACGTCATA TERM 655 645290 - 645314 + r 93 -14.4 -2.90723 | opp_overlap 645288 645294, overlap 645288 645294 TGGGTATCGATAACA CTAATCCGGC ATGAG GCCGGATTAG TGTGATTCCACGTCA TERM 656 645294 - 645310 + r 75 -9.4 -3.32647 | opp_overlap 645294 645288, overlap 645290 645288 TATCGATAACACTAA TCCGGC ATGAG GCCGGA TTAGTGTGATTCCAC TERM 657 645310 - 645294 - R 75 -9.4 -3.42459 | opp_overlap 645290 645288 645294, overlap 645288 TATCGATAACACTAA TCCGGC ATGAG GCCGGA TTAGTGTGATTCCAC Ssed_0529 647365 - 645332 - | methyl-accepting chemotaxis protein-like protein TERM 658 645830 - 645842 + g 83 -9.1 -4.42062 | TATGCTGCCTATCAC CTCGG AGA CCGAG TTTATTTCGGCGCTC TERM 659 647580 - 647546 - R 71 -7.3 -3.885 | gap 1, opp_overlap 647544 647546 AGTTGTAGATAATAA GTCACGAGC-AAAG TGTTTGTG CTTCGGCTCGTGAC TCTTTAGCTTATAGC Ssed_0530 648935 - 647610 - | ATP-dependent protease ATP-binding subunit Ssed_0531 649533 - 649009 - | ATP-dependent protease peptidase subunit TERM 660 649574 - 649553 - R 72 -8.7 -3.53012 | opp_overlap 649540 TTTCCTCTTCTCAAA CTGTCGAGT AGAT ACTCGTCAG TGGGTGATAGAAGAT Ssed_0532 650330 - 649764 - | sporulation domain-containing protein TERM 661 650309 - 650322 + g 70 -2.3 -4.90013 | TGGCCGGCTTTCTAT TGGCG TAGT CGCGA TTTTTCATTGAATTG TERM 662 650370 - 650412 + r 80 -10.1 -3.75153 | gap 2, overlap 650373 650378 ATCTGTTTTTAGCTT CAATGCCGAGGGGCGATCTTA ATT TAAGATAGCCCC--GGTATTG TTTAGGTTACAAAAG TERM 663 650378 - 650406 + r 73 -10.3 -2.749 | overlap 650373 650370 TTAGCTTCAATGCCG AGGGGCGATCTTA ATT TAAGATAGCCCCG GTATTGTTTAGGTTA Ssed_0533 652178 - 650433 - | arginyl-tRNA synthetase Ssed_0534 654574 - 652346 - | primosomal protein N' TERM 664 652484 - 652498 + g 80 -4.2 -5.28176 | AAAAATAAGATGTCG GCGG TATTTAC CCGC TTTTTTATCCATAGG Ssed_0535 654629 - 655435 + | hypothetical protein Ssed_0536 655695 - 655907 + | 50S ribosomal protein L31 TERM 665 655947 - 655963 + F 100 -10.8 -5.58179 | opp_overlap 655947 AATGAATTTTGAAAA GGCGCC TTTAT GGCGCC TTTTTTGTTATCCTC TERM 666 655963 - 655947 - f 90 -10.8 -4.15508 | opp_overlap 655947 AATGAATTTTGAAAA GGCGCC TTTAT GGCGCC TTTTTTGTTATCCTC Ssed_0537 656060 - 656920 + | nuclease Ssed_0538 657089 - 658336 + | malate dehydrogenase TERM 667 658358 - 658373 + F 100 -11.8 -5.71295 | opp_overlap 658358 CGTTCGAGATTGAAA GGGGCC TTTG GGCCCC TTTTTGTTTTTCTAT TERM 668 658373 - 658358 - f 89 -11.8 -3.70902 | opp_overlap 658358 CGTTCGAGATTGAAA GGGGCC TTTG GGCCCC TTTTTGTTTTTCTAT TERM 669 658698 - 658708 + G 73 -4.6 -4.71186 | TGGCTACTGTCTCTT GCCG CAG TGGC TTTTATATTCCTGCT TERM 670 658855 - 658880 + G 71 -8.5 -3.62096 | gap 1 CCTGGCTTCCCTCTA TTTTGACTGCCT ATA AGGCA-TCAAAA TTTCAACTGCTGGAA TERM 671 659865 - 659877 + G 77 -2.6 -5.24129 | TATGCCCTGGTTAAT CGGC GGCTG GTCG TTTTTTCTCAGCCAG Ssed_0539 658641 - 660551 + | regulatory protein CsrD TERM 672 660776 - 660806 + F 72 -8.3 -3.61232 | opp_overlap 660758 660775 CGTAAGAAAATTGAC GCTCGCCGTGTAT GTTTA ATACAAGGGGAGC TATTTGTGTAGGCAG Ssed_0540 660903 - 661817 + | biogenesis protein MshI Ssed_0541 661814 - 662425 + | fimbrial assembly family protein Ssed_0542 662422 - 663072 + | MSHA biogenesis protein MshJ TERM 673 663194 - 663213 + G 73 -8.6 -3.79747 | gap 1, opp_overlap 663187, overlap 663211 ATCACAGATGCCAGA GCGTCTGGC CAT GCCA-ACGC TTTGGTACTCAATAG Ssed_0543 663059 - 663409 + | MSHA biogenesis protein MshK TERM 674 665066 - 665050 - g 70 -2.3 -4.92363 | opp_overlap 665050 AAAGAGTTACAAAAA TCCAA GGCACTA TTGGA TCGTTGGTATCCGGA Ssed_0544 663406 - 665109 + | pilus (MSHA type) biogenesis protein MshL Ssed_0545 665113 - 666021 + | MSHA biogenesis protein MshM TERM 675 666575 - 666561 - g 76 -2.1 -5.22794 | overlap 666566 ATAACCAGTAAAAAA CAAAG GACGA CTTCG ACGCCTGTATCTCAG Ssed_0546 666018 - 667259 + | TPR repeat-containing protein Ssed_0547 667256 - 669010 + | type II secretion system protein E TERM 676 669237 - 669264 + G 87 -12.8 -3.34398 | opp_overlap 669239 669242, overlap 669235 669242 CTCGATGAGGCCAAG GAGAAGCGAGAG TTTT CTCTGGCTTCTC TGTTTAAGGGCAAAG Ssed_0548 669099 - 670319 + | type II secretion system protein TERM 677 670834 - 670855 + G 81 -3.7 -5.40072 | gap 1 GATCGATTAAGTTAT CAAC-TGTCC ACG GGGCGCGTTG TTTTTTTGACGAAAG Ssed_0549 670354 - 670875 + | hypothetical protein Ssed_0550 670947 - 671603 + | methylation site containing protein TERM 678 672160 - 672184 + G 71 -6.5 -4.16943 | overlap 672161 TACTTACACCGAATC TGATGGTGT AGGTAAA ACACCATCG TTTTCAGATATGCCA Ssed_0551 671696 - 672217 + | MSHA pilin protein MshA Ssed_0552 672263 - 672742 + | MSHA pilin protein MshA TERM 679 672787 - 672759 - f 100 -14.7 -4.15044 | opp_overlap 672765, overlap 672765 CTCCGTGCCAACAAA TAAAAAGGCCTGC CTA GCAGGCCTTTTTT GTATCTAAACATCTA TERM 680 672781 - 672765 - f 100 -13.7 -5.47159 | opp_overlap 672765, overlap 672759 GCCAACAAATAAAAA GGCCTGC CTA GCAGGCC TTTTTTGTATCTAAA TERM 681 672765 - 672781 + F 100 -13.7 -5.4251 | opp_overlap 672765 672759 GCCAACAAATAAAAA GGCCTGC CTA GCAGGCC TTTTTTGTATCTAAA TERM 682 673099 - 673118 + G 71 -8.6 -3.63694 | GAGACGAATTTGTCT CTGAGCTT CGCA AGGCTCAG TTGTTGGCGATGAAT Ssed_0553 672951 - 673418 + | MSHA pilin protein MshC TERM 683 673678 - 673713 + G 84 -12.6 -3.23274 | gap 1, overlap 673673 GTCCCCGCATGTGGC GCC-GCAGCGAGACCCG ATC TGGGTCTTCCTGCAGGC TTGGCTTGTACCGCG Ssed_0554 673408 - 674004 + | methylation site containing protein Ssed_0555 674004 - 674813 + | methylation site containing protein Ssed_0556 674803 - 675288 + | MSHA biogenesis protein MshP TERM 684 675454 - 675489 + G 73 -3.2 -5.00616 | opp_overlap 675460 675463 GGATCTAAACTGTAC TAGAAAGAGGGGCTGT GACA ACAGCACATCTGGCTA TTTTTTACCCGGAGA Ssed_0557 675290 - 678010 + | MSHA biogenesis protein MshQ Ssed_0558 678219 - 679268 + | cell shape determining protein MreB TERM 685 679280 - 679302 + F 100 -13.5 -5.82172 | opp_overlap 679280 679283 CTAATTTGGTATGAA CAAGGCGGT GTTTA ACCGCCTTG TTTTTTTCTATTCCT TERM 686 679302 - 679280 - f 93 -13.5 -3.15579 | opp_overlap 679280, overlap 679283 CTAATTTGGTATGAA CAAGGCGGT GTTTA ACCGCCTTG TTTTTTTCTATTCCT TERM 687 679299 - 679283 - f 79 -9.4 -3.72027 | opp_overlap 679280, overlap 679280 ATTTGGTATGAACAA GGCGGT GTTTA ACCGCC TTGTTTTTTTCTATT Ssed_0559 679407 - 680303 + | rod shape-determining protein MreC Ssed_0560 680300 - 680788 + | rod shape-determining protein MreD Ssed_0561 680791 - 681387 + | maf protein Ssed_0562 681497 - 682999 + | ribonuclease G Ssed_0563 682999 - 687258 + | hypothetical protein Ssed_0564 687182 - 688027 + | nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Ssed_0565 688086 - 689558 + | peptidase U62, modulator of DNA gyrase Ssed_0566 689688 - 691109 + | outer membrane efflux protein Ssed_0567 691099 - 692070 + | secretion protein HlyD family protein Ssed_0568 692089 - 693252 + | ABC-2 type transporter Ssed_0569 693249 - 694397 + | ABC-2 type transporter TERM 688 694497 - 694555 + T 100 -19.4 -3.11272 | opp_overlap 694512, overlap 694512 TGATTTAATGATTGC -TCCCGGTATAAGAAAGCCCACTCAGAT TAACT ATCTGAGTGGGCTTTTTT-TATCGGGAC TATTAGCTGGTAATA TERM 689 694540 - 694512 - T 100 -17.6 -4.30719 | opp_overlap 694497 694512 TCCCGGTATAAGAAA GCCCACTCAGAT TAACT ATCTGAGTGGGC TTTTTTTATCGGGAC TERM 690 694512 - 694540 + T 100 -17.6 -5.60993 | opp_overlap 694512, overlap 694497 TCCCGGTATAAGAAA GCCCACTCAGAT TAACT ATCTGAGTGGGC TTTTTTTATCGGGAC Ssed_0570 697270 - 694715 - | Ig domain-containing protein Ssed_0571 697892 - 697353 - | hypothetical protein Ssed_0572 698124 - 699464 + | peptidase U62, modulator of DNA gyrase TERM 691 699505 - 699522 + F 73 -7 -4.22883 | overlap 699494 GCTTGAGCTCTACTT GAGCTC TTATGT GAGCTC TTGTTTTAGCTCATG Ssed_0573 699606 - 700106 + | MshA, mannose-sensitive haemaglutinin TERM 692 700264 - 700296 + F 100 -12.3 -4.72333 | CTTATCCATATGTTA CTATCTCAGAAAA TGATAGT TTTTCTGAGATAG TTTTTGAGTCTAGTT Ssed_0574 700340 - 700684 + | ArsR family transcriptional regulator TERM 693 701012 - 701002 - g 71 -4.6 -4.59511 | AAGATGTGCGAAAAA GCCC TAA AGGC TTGGTACTGACTCTG Ssed_0575 700791 - 701840 + | arsenical-resistance protein Ssed_0576 701844 - 702905 + | glyceraldehyde-3-phosphate dehydrogenase TERM 694 702934 - 702988 + F 79 -11.4 -2.53249 | overlap 702933 702943 CTCTAGGCTCTAGGC TCTAGGCTCTAGGCTCTAGGCTCTAG GCT CTAGGTCCTAGGTCCTCGAACCTAGC CTCTATTATCTAAAC Ssed_0577 703016 - 704257 + | major facilitator transporter Ssed_0578 705085 - 705303 + | GCN5-related N-acetyltransferase Ssed_0579 706250 - 705321 - | putative LysR-like regular protein TERM 695 706760 - 706745 - g 71 -2.6 -4.92314 | opp_overlap 706750, overlap 706739 706746 AGGAATGTACAAAAA CTTTTG TCGG CAAAAA CTGACTATTGGTCTT Ssed_0580 706356 - 707492 + | chromate resistance protein-related protein Ssed_0581 709520 - 707643 - | GGDEF domain-containing protein TERM 696 708231 - 708219 - G 85 -2.7 -5.58179 | overlap 708223 GACGATAATAAAAAA CAAAC TTA GTTTA AGCTCATTAATCCGC TERM 697 708233 - 708223 - G 80 -4 -5.22768 | overlap 708219 ATAATAAAAAACAAA CTTA GTT TAAG CTCATTAATCCGCTC Ssed_0582 709771 - 710268 + | GCN5-related N-acetyltransferase TERM 698 710630 - 710618 - f 73 -10.5 -2.85351 | opp_overlap 710615 TGTGCCCATACGAGA CCCGC ATA GCGGG GCGTAACTTCTTAAG Ssed_0583 711267 - 711389 + | hypothetical protein TERM 699 711547 - 711567 + F 89 -11.9 -3.724 | GTGAAAAGTCGAGTC GGGCTAACT TCG GGTTAGCCC TTCTGTTAGTCGCTT Ssed_0584 712221 - 713600 + | amino acid carrier protein TERM 700 713613 - 713577 - T 75 -9.5 -3.37017 | opp_overlap 713578 713578 713590, overlap 713578 AAGCGTGAAGATGAA GCCCAGGCTAAAATCGC TTC GTGATTTTAGCCTAAGG TTTACTGCGCAAGGT TERM 701 713612 - 713578 - T 90 -13 -2.61728 | opp_overlap 713578 713578 713590, overlap 713577 AGCGTGAAGATGAAG CCCAGGCTAAAATCGC TTC GTGATTTTAGCCTAAG GTTTACTGCGCAAGG TERM 702 713578 - 713612 + T 77 -10.8 -2.83403 | opp_overlap 713578 713577, overlap 713578 713590 AGCGTGAAGATGAAG CCCAGGCTAAAATCGC TTC GTGATTTTAGCCTAAG GTTTACTGCGCAAGG TERM 703 713578 - 713613 + T 83 -10.6 -3.72695 | gap 1, opp_overlap 713578 713577, overlap 713578 713590 AGCGTGAAGATGAAG CC-CAGGCTAAAATCGC TTC GTGATTTTAGCCTAAGG TTTACTGCGCAAGGT Ssed_0585 714966 - 713851 - | ABC-2 type transporter Ssed_0586 715951 - 714968 - | ABC transporter-related protein Ssed_0587 716892 - 715948 - | hypothetical protein TERM 704 716099 - 716078 - G 78 -8 -4.36411 | TAGTAAGGAGTAAAA GCTGGCTG GGTACT CAGCCAAC GCAGCTTGCCTTGAA TERM 705 717234 - 717265 + H 89 -9.6 -4.23758 | opp_overlap 717234 717232, overlap 717222 717255 GATTTAGAGTAAAGA CTCTAATTTAGAGT AAAT GCTCTAAGTTGGAG TTTTAGCTCTAACGT Ssed_0588 717378 - 718286 + | hypothetical protein Ssed_0589 718427 - 719533 + | hypothetical protein Ssed_0590 719671 - 720528 + | hypothetical protein TERM 706 720552 - 720586 + F 83 -7.2 -4.73633 | CTATCAGTTTTGATA CTGCCGATGCATTG CCTGCAT CTATGTATTGGCAG TTTTATCTATTGTTA Ssed_0591 720630 - 721193 + | hypothetical protein TERM 707 721579 - 721603 + G 80 -4.9 -5.06451 | overlap 721580 GCGTTTTGGCCGTAT GCCGGTGTTGG CCC TCAACGTCGGA TTTTTTGGCATGGTC TERM 708 721580 - 721602 + G 71 -8.4 -3.63148 | overlap 721579 CGTTTTGGCCGTATG CCGGTGTTGG CCC TCAACGTCGG ATTTTTTGGCATGGT TERM 709 722665 - 722650 - g 79 -10.4 -3.68351 | GGTGCAGGAGTTAAA CTCGGC CAGC GCCGAG GTGGCAAACAGTGTG Ssed_0592 721346 - 722806 + | methyl-accepting chemotaxis protein Ssed_0593 724111 - 723065 - | putative transcriptional regulator TERM 710 724323 - 724309 - g 73 -5.6 -4.58395 | TTTATCTGTGAAAAA CTGGGC CAG GCCAAG CCATTGGGAGTATCG Ssed_0594 724186 - 725883 + | FAD linked oxidase domain-containing protein TERM 711 727101 - 727080 - g 77 -6.6 -4.62002 | opp_overlap 727080 ATGAAGGATATAAAA CAGGCTAA GTTTAG TCAGCCTG TTATGGGTTATGCCG Ssed_0595 725880 - 727535 + | FAD dependent oxidoreductase Ssed_0596 727532 - 729097 + | sugar (pentulose and hexulose) kinase Ssed_0597 729208 - 729483 + | hypothetical protein TERM 712 729588 - 729555 - T 89 -11.8 -3.6217 | overlap 729556 ACTTAGTATAGATAA GCTTGAATCCAGGG GGAGAG CCCTGGACTCAAGA CGTAGTAAGCAGATT TERM 713 729587 - 729556 - T 95 -15.3 -2.7682 | overlap 729555 CTTAGTATAGATAAG CTTGAATCCAGGG GGAGAG CCCTGGACTCAAG ACGTAGTAAGCAGAT Ssed_0598 729775 - 729602 - | hypothetical protein TERM 714 729651 - 729664 + g 91 -3.8 -5.63103 | overlap 729636 GCAGCTGCTGCCAGT CGCT CTTCCA AGCG TTTTTTTACTTCACG TERM 715 729693 - 729710 + g 82 -5.5 -5.0133 | CGTCTGTGTCTTAGG TCATCGG CGGC CCGTTGA TTTTTTGGGGCCGTC Ssed_0599 730920 - 730228 - | hypothetical protein TERM 716 731094 - 731078 - R 76 -6.6 -4.46926 | opp_overlap 731077 TATTGGAGCAGAAAA TGCACT CGACT AGTGCA ACTTATAACTGTCGA TERM 717 731148 - 731173 + r 70 -9.1 -3.14931 | opp_overlap 731154, overlap 731154 CGAAAAACGGATACA AAAAAACCTCC AGTT GGAGGTTTTTA TTCATAAACAATGAA TERM 718 731167 - 731154 - R 100 -8.1 -5.72616 | opp_overlap 731154 731148 ACGGATACAAAAAAA CCTCC AGTT GGAGG TTTTTATTCATAAAC TERM 719 731154 - 731167 + r 88 -8.1 -5.1356 | opp_overlap 731154, overlap 731148 ACGGATACAAAAAAA CCTCC AGTT GGAGG TTTTTATTCATAAAC Ssed_0600 731470 - 731198 - | histone family protein DNA-binding protein Ssed_0601 732527 - 731730 - | response regulator receiver protein Ssed_0602 733017 - 732625 - | hypothetical protein Ssed_0603 733132 - 733641 + | hypothetical protein TERM 720 733659 - 733686 + T 85 -11.4 -3.29121 | opp_overlap 733665, overlap 733665 CTTATGTGAGATAGG AAAAAAGCGAGG ATGT CCTCGCTTTTTG TTAGATGTTGTTTTT TERM 721 733665 - 733680 + T 93 -10.4 -5.12971 | opp_overlap 733665, overlap 733659 TGAGATAGGAAAAAA GCGAGG ATGT CCTCGC TTTTTGTTAGATGTT TERM 722 733680 - 733665 - T 100 -10.4 -5.24989 | opp_overlap 733665 733659 TGAGATAGGAAAAAA GCGAGG ATGT CCTCGC TTTTTGTTAGATGTT Ssed_0604 734022 - 733711 - | hypothetical protein TERM 723 734453 - 734434 - R 79 -5.7 -4.99043 | opp_overlap 734404 734434 734436, overlap 734436 GCCCTATAAACAAAA CAGAGGC CTGATT GCCTCTA TCTGTTTAAGCGTTA Ssed_0605 734754 - 734473 - | hypothetical protein Ssed_0606 735238 - 734933 - | hypothetical protein Ssed_0607 735656 - 736180 + | hypothetical protein TERM 724 736214 - 736242 + T 100 -10.4 -5.49569 | opp_overlap 736214 CGGAATGTTTAAAAA GGCTAAATGAGC TGACT GCTTGTTTAGCC TTTTTTCTGTTGATG TERM 725 736242 - 736214 - T 77 -6 -4.62471 | opp_overlap 736214 CGGAATGTTTAAAAA GGCTAAATGAGC TGACT GCTTGTTTAGCC TTTTTTCTGTTGATG Ssed_0608 736656 - 736345 - | hypothetical protein Ssed_0609 736712 - 737593 + | GumN family protein TERM 726 737660 - 737698 + F 86 -11 -3.90112 | opp_overlap 737666, overlap 737662 737665 CGCCTGTCTATACTC TGGAAACTAGCCTACTCC ATA GGGGAGGGCTAGATTCTA TTTGATTCACAGCAG TERM 727 737662 - 737696 + F 88 -11.4 -3.54146 | opp_overlap 737666, overlap 737660 737665 CCTGTCTATACTCTG GAAACTAGCCTACTCC ATA GGGGAGGGCTAGATTC TATTTGATTCACAGC TERM 728 737665 - 737693 + F 71 -7.3 -3.90298 | opp_overlap 737666, overlap 737662 737660 GTCTATACTCTGGAA ACTAGCCTACTCC ATA GGGGAGGGCTAGA TTCTATTTGATTCAC Ssed_0610 737723 - 738352 + | hypothetical protein Ssed_0611 738591 - 739457 + | dehydratase TERM 729 739516 - 739529 + F 100 -5.9 -5.93252 | opp_overlap 739516 GATAGAATGATGAAA GGCGT GAAC GCGCC TTTTTTGTTTTTCAC TERM 730 740228 - 740241 + G 73 -9.5 -3.28416 | GTATCGGGAGCAGTC GGGGC AAGC GCCCC TTAATATCGATCCTG Ssed_0612 739740 - 741452 + | formate--tetrahydrofolate ligase TERM 731 741578 - 741539 - T 70 -8.6 -3.30243 | opp_overlap 741540, overlap 741540 741546 AGCTACGCTCTATAA GGGAAAACAAGGCGACAA ATCA TTGAAGCCCTGTTTTCCT TTTAGCTCACGTAGT TERM 732 741540 - 741577 + T 89 -9.9 -4.1899 | opp_overlap 741539 741540 741546 GCTACGCTCTATAAG GGAAAACAAGGCGACAA ATCA TTGAAGCCCTGTTTTCC TTTTAGCTCACGTAG TERM 733 741577 - 741540 - T 81 -12.1 -2.57931 | opp_overlap 741540, overlap 741539 741546 GCTACGCTCTATAAG GGAAAACAAGGCGACAA ATCA TTGAAGCCCTGTTTTCC TTTTAGCTCACGTAG TERM 734 741657 - 741671 + T 72 -10 -2.53273 | opp_overlap 741657, overlap 741656 741647 CGTGCCCGTCAATCA GCTCAC TCG GTGAGC GTCTTGCTGGTTTAC TERM 735 741671 - 741657 - T 72 -10 -2.70932 | opp_overlap 741657 741656 741647 CGTGCCCGTCAATCA GCTCAC TCG GTGAGC GTCTTGCTGGTTTAC Ssed_0613 743326 - 741683 - | MscS mechanosensitive ion channel TERM 736 743086 - 743102 + g 100 -4.3 -5.98781 | overlap 743087 ACTCCTGGAGCTTGA GGTGCAG TAA CTGCGCA TTTTTTTTGATTCTG TERM 737 743087 - 743101 + g 75 -7.8 -4.16828 | overlap 743086 CTCCTGGAGCTTGAG GTGCAG TAA CTGCGC ATTTTTTTTGATTCT TERM 738 743532 - 743545 + G 74 -6.7 -4.34402 | CACGTGTTGTGTACC CACTG TAGT CAGTG TTTTGGTGTGAACGA Ssed_0614 743520 - 743855 + | hypothetical protein Ssed_0615 744417 - 744704 + | hypothetical protein TERM 739 744774 - 744803 + F 75 -7.9 -4.00589 | gap 1 AGCGTTTTTGATTTT GTTCACCTGCCC AAAAAAA GGGCGGG-GAAC TTTGCTGTATTTTGG Ssed_0616 744827 - 746014 + | hypothetical protein Ssed_0617 745998 - 746912 + | periplasmic solute binding protein TERM 740 746935 - 746975 + F 100 -14.9 -4.11404 | opp_overlap 746937 TGTTTTAGTTCAAGT TATCGACGCCTTTGCTTAT ATC AGGAGCAGAGGTGTCGATA TTTATCTCATATACG TERM 741 747246 - 747256 + G 73 -4.6 -4.68384 | GCCCTGTTTGCTTTG GCTG GAG CGGC TTTTATTGCCTGGCT Ssed_0618 746967 - 747827 + | ABC-3 protein TERM 742 748472 - 748461 - g 74 -4.4 -4.98672 | opp_overlap 748461 GCGAAAAAGATAAAA GAGA AGTG TCTC TCTATCTGGATCTTC Ssed_0619 748056 - 748778 + | 1-acylglycerol-3-phosphate O-acyltransferase Ssed_0620 748876 - 749304 + | hypothetical protein TERM 743 749346 - 749326 - T 89 -9.7 -4.30014 | opp_overlap 749327, overlap 749327 GTGATTAATTTAAAA GTGCCCATC TCC GATGGGCAT TTTTATTGGGCAGTG TERM 744 749345 - 749327 - T 91 -13.2 -3.17526 | opp_overlap 749327, overlap 749326 TGATTAATTTAAAAG TGCCCATC TCC GATGGGCA TTTTTATTGGGCAGT TERM 745 749327 - 749345 + T 100 -13.2 -5.06816 | opp_overlap 749326 749327 TGATTAATTTAAAAG TGCCCATC TCC GATGGGCA TTTTTATTGGGCAGT Ssed_0621 750376 - 749405 - | diguanylate cyclase Ssed_0622 751386 - 750391 - | response regulator receiver protein Ssed_0623 751797 - 752633 + | enoyl-CoA hydratase Ssed_0624 753830 - 752949 - | hypothetical protein TERM 746 753938 - 753905 - R 77 -9.5 -3.45054 | opp_overlap 753902, overlap 753906 753909 TCCTAGAATTCAGAA GCTAGGCGCTAGGTC CTAG AACCCAGCGCCTGGT ACCTGATTAAGCGTG TERM 747 753937 - 753906 - R 90 -13 -2.66711 | opp_overlap 753902, overlap 753905 753909 CCTAGAATTCAGAAG CTAGGCGCTAGGTC CTAG AACCCAGCGCCTGG TACCTGATTAAGCGT TERM 748 753934 - 753909 - R 90 -13.3 -2.6187 | opp_overlap 753902, overlap 753906 753905 AGAATTCAGAAGCTA GGCGCTAGGTC CTAG AACCCAGCGCC TGGTACCTGATTAAG Ssed_0625 756851 - 753945 - | ATP-dependent helicase HepA TERM 749 754193 - 754173 - G 74 -9.7 -3.55622 | TTCAACTTCGGCAAA CTCTTCGCC CTT GGCGAACAG AGGATGTAAAATCGT TERM 750 754980 - 755002 + g 74 -2.7 -5.03314 | gap 1, overlap 754982 TCCTTTGTGGTACCA CTGCATCAAG CACT CTTGA-GCCG TTTTTTCGAGGTAAG TERM 751 756055 - 756065 + g 81 -3.2 -5.4505 | overlap 756052 TCGGCATCCAAGGCT TGCT CTA AGCG TTTTTTCTTACGCAG TERM 752 757152 - 757162 + H 76 -6.8 -4.3467 | TGAGCATGAGCTGGG CAGC TTG GCTG TTTTACTGTGAAAAT Ssed_0626 757397 - 758791 + | PhoH family protein TERM 753 758846 - 758866 + F 100 -14.7 -4.60797 | opp_overlap 758846 ATATTAAACCAATAA GGCCTGGGT TTA ACCCGGGCC TTTTCTCTATGAAGC TERM 754 758866 - 758846 - f 93 -12.5 -3.92143 | opp_overlap 758846 ATATTAAACCAATAA GGCCTGGGT TTA ACCCGGGCC TTTTCTCTATGAAGC TERM 755 759117 - 759088 - f 73 -7.1 -3.99985 | overlap 759089 TATATACCCAAACAA CCTCGATATGCAG GATT CAGCATGTCGAGA AGTGACAGAGTTCAA TERM 756 759498 - 759520 + F 74 -4.1 -5.06414 | overlap 759499 ATATTGGTGTCATCA TCATGGCGT TGGTC ACGGCATGG TTTTTCTTCGAGCGA Ssed_0627 759500 - 763102 + | histidine kinase TERM 757 763151 - 763196 + F 85 -12.7 -3.23899 | opp_overlap 763154, overlap 763146 763153 763154 CCTGAGTCGAGTGGA TAACTCCCGCTTATAGCAATC GAGG GATTGAAATAAGCGGGAGGTG TTGAATTAATTGCAC TERM 758 763153 - 763194 + F 91 -13.1 -3.18134 | opp_overlap 763154, overlap 763151 763146 763154 TGAGTCGAGTGGATA ACTCCCGCTTATAGCAATC GAGG GATTGAAATAAGCGGGAGG TGTTGAATTAATTGC TERM 759 763154 - 763193 + F 100 -16.6 -2.50398 | opp_overlap 763154, overlap 763153 763151 763146 GAGTCGAGTGGATAA CTCCCGCTTATAGCAATC GAGG GATTGAAATAAGCGGGAG GTGTTGAATTAATTG TERM 760 763193 - 763154 - f 100 -16.6 -3.33162 | opp_overlap 763154 763153 763151 763146 GAGTCGAGTGGATAA CTCCCGCTTATAGCAATC GAGG GATTGAAATAAGCGGGAG GTGTTGAATTAATTG Ssed_0628 763415 - 765820 + | hypothetical protein TERM 761 765901 - 765876 - T 100 -16.9 -4.98531 | CGGTGAAATGAAAAA TCCCGACCCAC ATCA GTGGGCCGGGA GCGCCGGGAAGCAGT Ssed_0629 769320 - 766234 - | acriflavin resistance protein TERM 762 769260 - 769244 - G 72 -5.8 -4.3179 | CCAAAAAATGAGAAA CTGCCC CCCAC GAGCAG CAGTAGGGCAAACAT Ssed_0630 770748 - 769654 - | RND family efflux transporter MFP subunit TERM 763 771585 - 771605 + G 70 -9.7 -3.10715 | overlap 771590 CGCTACCCTAATGGT CGGATCTTC AAT GAAGTTCCG TTCGGTAATGATAGG Ssed_0631 770994 - 771941 + | carbonate dehydratase Ssed_0632 772619 - 772074 - | DNA-binding protein Ssed_0633 772869 - 773036 + | hypothetical protein TERM 764 773083 - 773106 + F 100 -6.7 -5.65177 | opp_overlap 773078 773083 AGTTGAAATATAAAA CGCCTTACT CTCTGT AGTCAGGCG TTTTTTTATGCGTAT TERM 765 773106 - 773083 - f 81 -6.7 -4.79451 | opp_overlap 773083, overlap 773078 AGTTGAAATATAAAA CGCCTTACT CTCTGT AGTCAGGCG TTTTTTTATGCGTAT Ssed_0634 773256 - 773678 + | hypothetical protein TERM 766 774019 - 774009 - g 77 -6.8 -4.64861 | TTTTCTCAAAATAAA CCTG CGT CAGG CAATCAATTACAACG Ssed_0635 773868 - 774170 + | hypothetical protein TERM 767 774286 - 774260 - T 100 -16 -3.93262 | opp_overlap 774260 TTGCAAGAGATGAAA CAGCCAAGAGTC ATG AACTCTTGGCTG TTTTTTATTGTCTGG TERM 768 774260 - 774286 + T 100 -15.3 -5.60689 | opp_overlap 774260 TTGCAAGAGATGAAA CAGCCAAGAGT CATGA ACTCTTGGCTG TTTTTTATTGTCTGG Ssed_0636 774825 - 774472 - | hypothetical protein Ssed_0637 775411 - 774917 - | hypothetical protein TERM 769 775527 - 775581 + r 72 -10.3 -2.62616 | gap 1, opp_overlap 775530 775534 775535 775538 775561 GGAGGGAGTGGCCAC TAACTAAGCTA-CAGGTATAGTTAGT GGTA ACTAACTATACCTGCTGGCATAGGAA TAATATGGCCACTAA TERM 770 775578 - 775530 - R 95 -14.2 -3.14931 | gap 1, opp_overlap 775527, overlap 775534 775535 775538 775561 GGGAGTGGCCACTAA CTAAGCTA-CAGGTATAGTTAGT GGTA ACTAACTATACCTGCTGGCATAG GAATAATATGGCCAC TERM 771 775574 - 775534 - R 95 -13.6 -3.39895 | gap 1, opp_overlap 775527, overlap 775530 775535 775538 775561 GTGGCCACTAACTAA GCTA-CAGGTATAGTTAGT GGTA ACTAACTATACCTGCTGGC ATAGGAATAATATGG TERM 772 775572 - 775535 - R 95 -15.1 -2.63723 | opp_overlap 775527, overlap 775534 775530 775538 775561 TGGCCACTAACTAAG CTACAGGTATAGTTAGT GGTA ACTAACTATACCTGCTG GCATAGGAATAATAT TERM 773 775569 - 775538 - R 100 -17.6 -2.61216 | opp_overlap 775527, overlap 775535 775534 775530 775561 CCACTAACTAAGCTA CAGGTATAGTTAGT GGTA ACTAACTATACCTG CTGGCATAGGAATAA Ssed_0638 776035 - 775637 - | hypothetical protein TERM 774 776003 - 776020 + g 76 -7 -4.32951 | opp_overlap 776002 776003 CACCGGCAGGATAAG TGCGGA TACGAC TCCGCA TTTCTTAATTAACAT Ssed_0639 776932 - 776276 - | hypothetical protein Ssed_0640 778357 - 776993 - | MATE efflux family protein Ssed_0641 778589 - 778879 + | co-chaperonin GroES TERM 775 778908 - 778931 + F 83 -12.6 -2.71263 | opp_overlap 778897, overlap 778891 778897 GACATTTTTCCAATG CCTATGGTTT CGAT AAACCATAGG TAATTAAAAAGAATT TERM 776 779217 - 779242 + G 76 -9.7 -3.63073 | opp_overlap 779211 AGCCAATGATGCAGC CGGTGACGGTA CGAC TACCGCTACCG TTCTTGCACAATCTA Ssed_0642 778963 - 780612 + | chaperonin GroEL TERM 777 780797 - 780762 - T 100 -17.8 -3.57106 | opp_overlap 780767, overlap 780767 CCTAAGCCAAACGAA TAAAAGCCCCGATACT TAAC AGTATCGGGGCTTTTT TGTACATGGACTTCT TERM 778 780792 - 780767 - T 100 -17.7 -4.84642 | opp_overlap 780767, overlap 780762 GCCAAACGAATAAAA GCCCCGATACT TAAC AGTATCGGGGC TTTTTTGTACATGGA TERM 779 780767 - 780792 + T 100 -17.7 -5.28176 | opp_overlap 780767 780762 GCCAAACGAATAAAA GCCCCGATACT TAAC AGTATCGGGGC TTTTTTGTACATGGA Ssed_0643 783369 - 781024 - | ATPase TERM 780 781412 - 781378 - G 75 -11.6 -2.64375 | opp_overlap 781379 781380 AAAATCTTTACAGTA CCTTCTTACGTCAACA ACT TGTTGACGTAAGAACT TTATTCGGTCTTTTG TERM 781 781379 - 781411 + g 100 -15.1 -4.27911 | opp_overlap 781378, overlap 781380 AAATCTTTACAGTAC CTTCTTACGTCAACA ACT TGTTGACGTAAGAAC TTTATTCGGTCTTTT TERM 782 781380 - 781410 + g 100 -18.6 -3.1512 | opp_overlap 781378, overlap 781379 AATCTTTACAGTACC TTCTTACGTCAACA ACT TGTTGACGTAAGAA CTTTATTCGGTCTTT Ssed_0644 784201 - 783434 - | transposase InsF for insertion sequence IS3A/B/C/D/E/fA Ssed_0645 784584 - 784291 - | ISxac3 transposase Ssed_0646 784855 - 784628 - | ATPase Ssed_0647 785570 - 784917 - | cold-shock DNA-binding domain-containing protein TERM 783 785069 - 785081 + g 82 -5.5 -5.16038 | AGCGGAATGTCTCTT TGGGC TGA GTCCA TTTTATTTGTTCTGT TERM 784 785732 - 785676 - H 79 -11.5 -2.66218 | opp_overlap 785693, overlap 785675 785693 TATTCATGAAAAACT GGGCTTAGGCTCTACAAGTCGGGTCAG ACT CTGCCCCAACTTTTAGCCGCGAAGCCC CTTCCTGCGGGGACT TERM 785 785715 - 785693 - H 75 -9.8 -3.30124 | opp_overlap 785693, overlap 785676 785675 GCTTAGGCTCTACAA GTCGGGTCAG ACT CTGCCCCAAC TTTTAGCCGCGAAGC TERM 786 785693 - 785715 + H 73 -7.6 -4.07568 | opp_overlap 785676 785675 785693 GCTTAGGCTCTACAA GTCGGGTCAG ACT CTGCCCCAAC TTTTAGCCGCGAAGC Ssed_0648 785914 - 787092 + | ATPase central domain-containing protein Ssed_0649 787553 - 788209 + | hypothetical protein TERM 787 788234 - 788260 + F 93 -10.3 -5.01535 | gap 1 GTGGGGGGGGGATTT GGGTCAGAGTAA ATTT TTAC-CTGACCC TTTTTGTCGTTATCC TERM 788 788421 - 788395 - f 82 -8 -4.55908 | AATAAATACAATAAA GTTGCGCGCAAT TAG ATTGCTCGAAAC CTACATCTTGATGTG TERM 789 788681 - 788696 + G 77 -4.6 -4.99035 | GCTGTATACGCGACA TGACGC CAGT GCGCCA TTTTTATGTAGATAA TERM 790 788843 - 788859 + G 73 -2.1 -5.15969 | overlap 788845 CAGGCACTTTTCCGG CAACCAG TGA CTGGGAG TTTTTTGAGTTAGAA Ssed_0650 788533 - 789171 + | hypothetical protein TERM 791 791077 - 791039 - g 82 -5.4 -5.08824 | opp_overlap 791048 791053, overlap 791049 TCGTGAGCCAAAAAA TCAAAATCAATTAATTCG TCG CGAATTAAATGGTGTCGA AAAGTTTATCTATGT TERM 792 791067 - 791049 - g 76 -9 -3.82764 | opp_overlap 791048 791053, overlap 791039 AAAAATCAAAATCAA TTAATTCG TCG CGAATTAA ATGGTGTCGAAAAGT Ssed_0651 789408 - 792611 + | metal dependent phosphohydrolase Ssed_0652 793304 - 793053 - | hypothetical protein Ssed_0653 794290 - 793451 - | hypothetical protein Ssed_0654 795107 - 794301 - | hypothetical protein TERM 793 794419 - 794433 + g 76 -7.1 -4.42386 | opp_overlap 794416 794419, overlap 794414 ACGGCTCTAACAGCA GCCTG AGCTG CAGGC TTTTGTGGATAACCA TERM 794 795194 - 795204 + r 75 -8.2 -4.09685 | overlap 795193 GATAGCCTGTCTACT CCCC ATG GGGG TTTTGAAAACTACAA Ssed_0655 796106 - 795270 - | metal dependent phosphohydrolase Ssed_0656 797113 - 796208 - | metal dependent phosphohydrolase Ssed_0657 797769 - 797161 - | short chain dehydrogenase Ssed_0658 797868 - 798773 + | LysR family transcriptional regulator TERM 795 798806 - 798832 + F 84 -10.2 -3.86346 | AAATTGGATCCGTCA GGCATAGAGTAA ACT TTTCTCTGTGCC TTTGTCGGGGCGTCC Ssed_0659 799099 - 799503 + | hypothetical protein Ssed_0660 799872 - 801038 + | hypothetical protein Ssed_0661 801041 - 801862 + | hypothetical protein TERM 796 801884 - 801908 + T 73 -7.2 -4.13711 | opp_overlap 801882 ACCTTGAACACGAGT CAGCCATAAT AATTA ACTATGGCTG TTTATCGTGTTTTAC Ssed_0662 802207 - 801920 - | hypothetical protein TERM 797 802463 - 802499 + r 73 -9.4 -3.15236 | opp_overlap 802485, overlap 802486 802489 GCAAGCTCAATGTGA TGTGGAAGCTGGAGGT TAGAT ACCTCCAGCTACCCAA TTAGCTGTAGATTTA Ssed_0663 804519 - 802516 - | beta-lactamase-like protein Ssed_0664 806475 - 804844 - | Signal transduction histidine kinase-like protein TERM 798 807258 - 807279 + G 76 -10.9 -3.19602 | opp_overlap 807242, overlap 807256 CTGTTACTTGGGAGT CCAGTGACA GCAA TGTCGCTGG TGTTGATGTCAAGGG Ssed_0666 807005 - 807337 + | hypothetical protein Ssed_0667 807334 - 808557 + | hypothetical protein TERM 799 808591 - 808624 + T 89 -11.9 -3.54029 | gap 1, opp_overlap 808588 808591 AATTAGTAGTAATTA GTAGGGTCAGAGAAAA CTT TTTAC-CTGACCCTAC TTGTCGTTAATCCAC TERM 800 808624 - 808591 - T 90 -13.3 -2.8076 | opp_overlap 808591, overlap 808588 AATTAGTAGTAATTA GTAGGGTCAGAGAAA ACTT TTTACCTGACCCTAC TTGTCGTTAATCCAC TERM 801 808853 - 808839 - T 73 -7.8 -3.91911 | opp_overlap 808838 TTCACCTCAATCAAA CAGCTC GTC GAGCCG GTAATATTGGACCTT Ssed_0668 810172 - 809009 - | MFS transporter Ssed_0669 810403 - 810236 - | dehydrogenase Ssed_0670 810677 - 811615 + | LysR family transcriptional regulator TERM 802 811770 - 811781 + T 79 -5.8 -4.84918 | ACCGCTGCTAAAGTG GTCG TTCC CGAC TTTTCTATTTCTACA Ssed_0671 812926 - 811748 - | hypothetical protein Ssed_0672 813983 - 813276 - | NADH dehydrogenase TERM 803 814176 - 814211 + r 76 -10.6 -2.71011 | gap 1, opp_overlap 814171 814210 TGTTAGGATAGGTTA ACTCGAATTTGGGGCAG CTT TTGCCCCAAATTC-AGC TGATTCAAACAAGCT Ssed_0673 814511 - 814260 - | hypothetical protein Ssed_0674 814742 - 815125 + | hypothetical protein Ssed_0675 815836 - 815282 - | hypothetical protein TERM 804 815356 - 815373 + g 90 -2.7 -5.70829 | CCTTTTCCAGATCAT GCCTT TCGTTCTT AAGGC TTTTTTTATCCTCTT TERM 805 816342 - 816325 - H 73 -5.5 -4.63932 | overlap 816326 CATGGGGCAAGAAAA CGGTCAG CAGC CTGACCT AAGCTTACCTTGTAG TERM 806 816341 - 816326 - H 72 -9 -3.37877 | overlap 816325 ATGGGGCAAGAAAAC GGTCAG CAGC CTGACC TAAGCTTACCTTGTA TERM 807 816478 - 816488 + H 71 -6.8 -4.05193 | AATAGTTAAGTTGCT GCTC GGG GAGC TTATTCTCTTTAATA Ssed_0676 816689 - 817777 + | cysteine synthase A Ssed_0677 818732 - 817848 - | LysR family transcriptional regulator Ssed_0678 818868 - 819392 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 808 819421 - 819445 + T 75 -10 -3.17325 | overlap 819418 AACTATGTCTGTGAA TCCCGCAATC CTGAA GTTTGCGGGA TCTCTTGTCAAAGCT Ssed_0679 820942 - 819464 - | Na+/H+ antiporter TERM 809 820797 - 820778 - G 80 -4.9 -5.05037 | opp_overlap 820778 820795 GAAGACAAAAATAAA CAGCGCG AGATAA CCCGCTG TTGTGGCAGTTAAGT TERM 810 821238 - 821218 - H 89 -10.5 -4.21194 | opp_overlap 821218 821217 821215 CTCCAGTACCTAAAA TGAGCCCAT ATC ATGAGCTCA ATGTTTAACGAAAAA TERM 811 821364 - 821342 - g 80 -4.8 -5.0538 | opp_overlap 821344, overlap 821344 GGTCAGTGCAAAAAA CTTCCTGAGA TAC TGTCAGGATG GATTCTATGAAGGCA Ssed_0680 821265 - 821756 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 812 821812 - 821854 + T 100 -14.3 -3.86524 | opp_overlap 821818, overlap 821815 821818 TGTATTTAATGAGCT GAATAACCGGGACATCATG CAAAC CATGATGTCCCGGTTGTAG TTTCTAAGGCAATGT TERM 813 821815 - 821851 + T 100 -20.4 -3.00946 | opp_overlap 821818, overlap 821812 821818 ATTTAATGAGCTGAA TAACCGGGACATCATG CAAAC CATGATGTCCCGGTTG TAGTTTCTAAGGCAA TERM 814 821848 - 821818 - T 100 -19.9 -3.66732 | opp_overlap 821815 821812 821818 TAATGAGCTGAATAA CCGGGACATCATG CAAAC CATGATGTCCCGG TTGTAGTTTCTAAGG TERM 815 821818 - 821848 + T 100 -19.9 -3.64915 | opp_overlap 821818, overlap 821815 821812 TAATGAGCTGAATAA CCGGGACATCATG CAAAC CATGATGTCCCGG TTGTAGTTTCTAAGG Ssed_0681 822764 - 821871 - | phospholipase A(1) Ssed_0682 823940 - 823041 - | hypothetical protein Ssed_0683 824164 - 824667 + | transcriptional regulator, MarR family protein TERM 816 824896 - 824878 - g 80 -8.2 -4.40605 | ATCGAGAAATATAAA CAGAGACA TTT TATCTCTG TCGGGTAGTGTCGAT Ssed_0684 824831 - 825226 + | chemotaxis protein CheY TERM 817 825693 - 825705 + G 70 -7.7 -3.91674 | overlap 825691 CTTGTTGATCCTTGG GGTCA GCT TGACC TGTTTTATCTCTGCC TERM 818 825767 - 825791 + G 75 -11.5 -2.64274 | opp_overlap 825764 825761, overlap 825764 825763 GATTTACAATGATTA TCGTGATTGGC GAT GCAAATCACGA TACCTTTGAGGCGCT Ssed_0685 825385 - 826449 + | hypothetical protein Ssed_0686 826650 - 827111 + | heat shock protein HSP20 TERM 819 827229 - 827213 - f 76 -10.8 -2.674 | opp_overlap 827213, overlap 827212 827210 TGAAGAGCTAAATAT GGCGCC TGTGT GGCGCC TTTTTTGTATATGGC TERM 820 827213 - 827229 + F 100 -10.8 -5.4251 | opp_overlap 827213 827212 827210 TGAAGAGCTAAATAT GGCGCC TGTGT GGCGCC TTTTTTGTATATGGC Ssed_0687 827789 - 829000 + | NnrS family protein Ssed_0688 829072 - 830466 + | nitrite reductase (cytochrome; ammonia-forming) TERM 821 830496 - 830531 + T 100 -14.8 -3.59583 | opp_overlap 830474 830495 830494 830491 830498 TTCTTAGTAAGAACC TATATGGCCGAAGCGG TATT TCGCTTCGGCCAAGTA TTTCAGAGTCGTTAT TERM 822 830528 - 830498 - T 81 -12 -2.67428 | gap 1, opp_overlap 830496, overlap 830474 830495 830494 830491 CTTAGTAAGAACCTA TATGGCCGAAGCG GTATTT CGCTTCGGCCA-A GTATTTCAGAGTCGT Ssed_0689 831827 - 830658 - | transport protein of the major facilitator Ssed_0690 832686 - 833444 + | LuxR family transcriptional regulator Ssed_0691 833448 - 834122 + | two component transcriptional regulator Ssed_0692 834112 - 835326 + | histidine kinase A domain-containing protein TERM 823 835354 - 835385 + F 81 -11.7 -2.79023 | gap 1, opp_overlap 835341 835350 835351, overlap 835351 AATACGAAAGAGCTG TCCTGGCTAC-GAC AACGC GTCCGTAGCCGGGA TACTTAATACACTTC TERM 824 836081 - 836061 - g 81 -12.7 -2.53263 | opp_overlap 836060 836061 CTGACCGTTAAGTCA CTGCTTATC GTA GATAAGCAG ATTGGTGATACAAGT TERM 825 836061 - 836081 + G 81 -12.7 -2.52635 | opp_overlap 836061, overlap 836060 CTGACCGTTAAGTCA CTGCTTATC GTA GATAAGCAG ATTGGTGATACAAGT Ssed_0693 835800 - 836546 + | hypothetical protein TERM 826 836599 - 836587 - g 71 -4.1 -4.78764 | opp_overlap 836595, overlap 836595 TAAAGTGATTAAAAA GACAA TTA TTGCC AGTGCAATTGTGGCA Ssed_0694 836576 - 838330 + | fumarate reductase, flavoprotein subunit precursor TERM 827 838383 - 838354 - f 70 -9.3 -3.24411 | opp_overlap 838357, overlap 838352 838350 838357 ATCTGCTTAAATAGA GTATGCCGTTCAC TTCA GTGAACGGCATTT TTTTCATCAATGATG TERM 828 838380 - 838357 - f 95 -15.4 -2.80821 | opp_overlap 838357, overlap 838354 838352 838350 TGCTTAAATAGAGTA TGCCGTTCAC TTCA GTGAACGGCA TTTTTTTCATCAATG TERM 829 838357 - 838380 + F 100 -15.4 -5.53991 | opp_overlap 838357 838354 838352 838350 TGCTTAAATAGAGTA TGCCGTTCAC TTCA GTGAACGGCA TTTTTTTCATCAATG TERM 830 838934 - 838914 - g 78 -11.1 -3.36452 | opp_overlap 838914 AGGGCTGAATATCAA CCCTTCGGC GGT GGCGAAGGG TTATGGAGTGGATCG TERM 831 838914 - 838934 + G 78 -11.1 -3.33492 | opp_overlap 838914 AGGGCTGAATATCAA CCCTTCGGC GGT GGCGAAGGG TTATGGAGTGGATCG Ssed_0695 838408 - 839421 + | ApbE-like lipoprotein TERM 832 839611 - 839630 + T 79 -10.8 -3.25942 | opp_overlap 839604 839613 ATGATTAAGCCTGAA GAGCCTTA GTGA TAAGGCTC TTACTCTGGGAGGCT Ssed_0696 839984 - 839661 - | hypothetical protein TERM 833 840586 - 840599 + G 73 -4.5 -4.8143 | TAAAACCTGCTCTGT TCGCT TAAT GGCGA TTTTTACCTTGTTCA TERM 834 841304 - 841318 + G 73 -7.8 -3.98083 | AAGGGGCTACCTGAT GGTCTG ACT CAGGCC TTTATCGATTACATC Ssed_0697 840563 - 841399 + | phosphate binding protein Ssed_0698 841446 - 842324 + | phosphate transporter permease PstC TERM 835 842345 - 842359 + G 77 -2.8 -5.20534 | TTGATAGGCTATTGG GGCA AGCTGTG TGCC TTTTTATTAATTAGT Ssed_0699 842321 - 843217 + | binding-protein-dependent transport systems inner membrane component TERM 836 843378 - 843368 - g 73 -5.4 -4.56597 | opp_overlap 843354, overlap 843372 CGGGTTGTGGAAAAA CAAC CCT GTTG CGGGCGTTAAACAGG Ssed_0700 843211 - 843936 + | ABC transporter related TERM 837 843951 - 843977 + F 100 -11 -5.64304 | opp_overlap 843954 GTTTCATCACCTGAA CCATCAGTGA GTGTGTA TCACTGATGG TTTTTTATTATCTTA Ssed_0701 844287 - 845324 + | helix-turn-helix-domain-containing protein TERM 838 845924 - 845942 + G 73 -8.8 -3.91897 | opp_overlap 845924 845923 GACGACGGCCGAAAC GGCGAGAG TTG CTCTCGAC TTTGTGAATAAACAA Ssed_0702 845421 - 847442 + | beta-lactamase-like protein TERM 839 847459 - 847484 + F 84 -10.4 -3.89212 | opp_overlap 847461 GATAGTAAGGTTATA CAGCTCCTGG ATTTAA CCAGGAGCCG TTTGCTATCTAACTA TERM 840 847482 - 847461 - f 80 -11.6 -2.92157 | opp_overlap 847459 TAGTAAGGTTATACA GCTCCTGG ATTTAA CCAGGAGC CGTTTGCTATCTAAC Ssed_0703 847686 - 849062 + | fumarate hydratase Ssed_0704 850206 - 849115 - | hypothetical protein Ssed_0705 850305 - 850883 + | lipase-like protein TERM 841 850958 - 850935 - T 71 -9.6 -2.77899 | gap 1, opp_overlap 850933, overlap 850932 TGCTCCCATTAAGCA CCTCTTGCCGC TTA GCGGCAAG-GA TCTGAGTTCAGTTGC Ssed_0706 851918 - 850989 - | transporter DMT superfamily protein Ssed_0707 852274 - 853815 + | FG-GAP repeat-containing protein TERM 842 853925 - 853955 + F 91 -13.5 -2.91703 | gap 1, opp_overlap 853915 853925 853931 853932, overlap 853932 GATCAGCTGAGTTAA CATAAAGCAGCGCC AAAA GGCGCTG-TTTATG CTTCTGTTTACCTTT TERM 843 853955 - 853925 - f 93 -13.5 -3.07113 | gap 1, opp_overlap 853925 853932, overlap 853915 853931 853932 GATCAGCTGAGTTAA CATAAAGCAGCGCC AAAA GGCGCTG-TTTATG CTTCTGTTTACCTTT TERM 844 853950 - 853931 - f 85 -9.2 -4.21607 | opp_overlap 853925 853932, overlap 853915 853925 853932 CTGAGTTAACATAAA GCAGCGCC AAAA GGCGCTGT TTATGCTTCTGTTTA TERM 845 853949 - 853932 - f 85 -12.7 -3.12482 | opp_overlap 853925 853932, overlap 853915 853931 853925 TGAGTTAACATAAAG CAGCGCC AAAA GGCGCTG TTTATGCTTCTGTTT TERM 846 853932 - 853949 + F 100 -12.7 -4.14908 | opp_overlap 853915 853932 853931 853925, overlap 853925 TGAGTTAACATAAAG CAGCGCC AAAA GGCGCTG TTTATGCTTCTGTTT Ssed_0708 854106 - 855473 + | hypothetical protein TERM 847 855500 - 855517 + T 100 -9.9 -5.5074 | opp_overlap 855500 GCCGTCGGTGCTAAA GCAGAGT ATTT ACTCTGC TTTTTTATTGCCTTA TERM 848 855517 - 855500 - T 77 -9.9 -3.53012 | opp_overlap 855500 GCCGTCGGTGCTAAA GCAGAGT ATTT ACTCTGC TTTTTTATTGCCTTA Ssed_0709 856495 - 855530 - | hypothetical protein Ssed_0710 856652 - 857467 + | hypothetical protein TERM 849 857495 - 857522 + T 80 -11.4 -2.76315 | opp_overlap 857501, overlap 857501 TCACTCAACGCCGAA TAAAAACGAGCC AGCT GGCTCGTTTTTC ATTTGAACCTATTGG TERM 850 857516 - 857501 - T 93 -10.4 -5.08088 | opp_overlap 857495 857501 AACGCCGAATAAAAA CGAGCC AGCT GGCTCG TTTTTCATTTGAACC TERM 851 857501 - 857516 + T 93 -10.4 -4.98531 | opp_overlap 857501, overlap 857495 AACGCCGAATAAAAA CGAGCC AGCT GGCTCG TTTTTCATTTGAACC Ssed_0711 858799 - 857531 - | integral membrane sensor signal transduction histidine kinase Ssed_0712 859485 - 858799 - | two component transcriptional regulator TERM 852 859443 - 859423 - G 77 -4 -5.08824 | gap 1, overlap 859425 CTGGGATTCAAAAAA GTCGGCAAG TATA CCTGCC-AC ATCCGGGTTGTCTTC TERM 853 859685 - 859706 + G 71 -8.7 -3.71804 | opp_overlap 859684 859687 ATTCCTATGTACAAC GAGGCTGAA ATGC TTCAGCCAC TCTTTTCCCGTTTAA Ssed_0713 859613 - 860644 + | glycosyl transferase TERM 854 861914 - 861932 + G 71 -7.4 -3.9941 | opp_overlap 861916 CCGAGTTACGCCAAG TAGCAGGG GTC CCCTTCTA TTTAGTTGTGAAAAA Ssed_0714 860641 - 862035 + | hypothetical protein TERM 855 862051 - 862071 + G 73 -10.5 -3.16683 | opp_overlap 862053, overlap 862044 862043 GAGTTATATTCAGCA GAGTCAGAT CGT GTCTGACTC TTACTCAGCTGAAGT Ssed_0715 862023 - 862451 + | hypothetical protein Ssed_0716 862607 - 863287 + | OmpA/MotB domain-containing protein TERM 856 863314 - 863331 + F 100 -12.7 -5.24531 | opp_overlap 863309 863314 AAATGAAAGATTTAA GGCTGCC AATT GGCAGCC TTTTTTATGCCCGCT TERM 857 863331 - 863314 - f 87 -12.7 -3.27153 | opp_overlap 863314, overlap 863309 AAATGAAAGATTTAA GGCTGCC AATT GGCAGCC TTTTTTATGCCCGCT TERM 858 863836 - 863824 - f 80 -7.7 -4.44046 | TGGACTTCAAATAAA GAAGC GAT GCTTC CCTCACGCCACAGGG TERM 859 864545 - 864559 + G 76 -2.1 -5.25656 | gap 1, opp_overlap 864545, overlap 864547 CGGAAGCGGATAATA CAGTGG AAAA CC-CTG TTTTTTACTCATTTT Ssed_0717 864406 - 864840 + | hypothetical protein Ssed_0718 864928 - 865251 + | hypothetical protein TERM 860 865578 - 865590 + G 71 -6.3 -4.1851 | AAATATAATCAGATG GAAAC AGA GTTTC TTATTTATAATTTGG Ssed_0719 865305 - 865781 + | hypothetical protein TERM 861 865972 - 865945 - f 70 -3.4 -5.00616 | overlap 865947 GGGTGGGTGAAAAAA GGTCATGTCCCT AAAA AGGAAAATGATC AACTCATGCGTAAAC TERM 862 866252 - 866230 - g 77 -4.2 -5.08601 | gap 1 GCACTTGAAGAAAAA GGCT-TCGA TGGAAT TCGAGAGCC AGAGCGAGTGCTTGC Ssed_0720 866179 - 866586 + | hypothetical protein Ssed_0721 868425 - 867061 - | magnesium transporter Ssed_0722 868813 - 868538 - | phosphocarrier protein NPR TERM 863 868673 - 868685 + g 81 -6.2 -4.88388 | TAATCCTAGCACACT GGCG GCGGA CGCC TTTTTATCACCTTGT Ssed_0723 869654 - 868806 - | hypothetical protein TERM 864 869312 - 869326 + g 80 -7.2 -4.50058 | opp_overlap 869323 TTTCATGCTCAATCG CTTCTT TCA AAGAAG TTTTACTTCTCGATA Ssed_0724 870094 - 869651 - | PTS IIA-like nitrogen-regulatory protein PtsN TERM 865 870092 - 870102 + g 71 -4 -4.73635 | GATCTTACTAAGTTC CATT ATT AATG TTTTGTTAGCTTCTC Ssed_0725 870384 - 870097 - | sigma 54 modulation protein/ribosomal protein S30EA TERM 866 870220 - 870204 - G 71 -4.3 -4.76041 | opp_overlap 870207 870209 870219, overlap 870206 CAGACGTAGCAAAAA CCTCACC ACC GGAAAGG TGGAGTTTTGCTTCC TERM 867 870207 - 870225 + g 72 -5.9 -4.41895 | opp_overlap 870204 870206, overlap 870209 870219 ACGTAGCAAAAACCT CACCACC GGAAA GGTGGAG TTTTGCTTCCGCCTT Ssed_0726 871944 - 870451 - | RNA polymerase factor sigma-54 TERM 868 870541 - 870576 + g 72 -6 -4.4522 | gap 1, overlap 870570 870571 TTTGATCCCCTGTTC CCCCAGTAGCGTCGCCA TTT TGCTGTCGCT-CAGGGG TTTCTTCTGGTTTTC TERM 869 871239 - 871264 + g 72 -10.5 -3.02144 | TCAAGAGTTTGGCAT TGCCGATATGA GGAG TCGTGTCGGCA TATTGGGCGAGCTGA TERM 870 871891 - 871863 - G 93 -13.2 -3.76224 | opp_overlap 871851 871863 GTTCCAGCGACGAAA GCTGCAAAAGGC GTATT GCCTGTTGCAGC TGTGGTGTCATGGTT TERM 871 871863 - 871891 + g 88 -13.9 -2.88212 | opp_overlap 871863, overlap 871851 GTTCCAGCGACGAAA GCTGCAAAAGGCG TAT TGCCTGTTGCAGC TGTGGTGTCATGGTT Ssed_0727 872816 - 872085 - | ABC transporter-related protein TERM 872 872663 - 872683 + g 100 -10.5 -4.56775 | TCTGCACTAAGCCGA CCACCATAT AAA ATGTGGTGG TTTTTCCCGCACCAT TERM 873 872709 - 872728 + g 71 -4.2 -4.8048 | overlap 872698 872698 ACCATTTGGGCCTAA CAGGCCGA CAAT TTGCCCTG TTTTTACTGTGAGAC Ssed_0728 873466 - 872813 - | OstA family protein Ssed_0729 874010 - 873453 - | hypothetical protein Ssed_0730 874558 - 874007 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Ssed_0731 875623 - 874646 - | arabinose-5-phosphate isomerase Ssed_0732 876622 - 875663 - | CaCA family Na(+)/Ca(+) antiporter TERM 874 875993 - 876022 + g 71 -9.4 -3.57792 | AGCGATAATCGTCAG GCCTATCACC AGATCTGAAA GGTGATAGGC TTTGGCAATGCCTAC Ssed_0733 876900 - 877703 + | ABC transporter-related protein Ssed_0734 877768 - 878550 + | hypothetical protein Ssed_0735 878607 - 879077 + | virulence factor MCE-like protein TERM 875 879482 - 879452 - g 87 -11.3 -4.29738 | opp_overlap 879459, overlap 879459 GTACACGGATCAAAA GGTAAAATTTGCC CCTCC GGCAGATTTTACC CATGAAAAGATGGTG Ssed_0736 879081 - 879743 + | toluene tolerance family protein Ssed_0737 879744 - 880046 + | SpoIIAA family protein Ssed_0738 880051 - 880341 + | BolA family protein TERM 876 880393 - 880375 - g 71 -10.2 -2.90395 | opp_overlap 880373 880371 TAAATTAAAAATTGA GGCGAGCG AAG CGCTTGCC GGTAATGTTGTAATA Ssed_0739 880355 - 881614 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 877 881662 - 881639 - f 87 -12.4 -3.34534 | opp_overlap 881639 TATATTAGATATCAA GCCACCGTTG AGCT CATCGGTGGC TTTTTTATTCCTGTC TERM 878 881639 - 881662 + F 100 -12.4 -5.5353 | opp_overlap 881639 TATATTAGATATCAA GCCACCGTTG AGCT CATCGGTGGC TTTTTTATTCCTGTC TERM 879 883206 - 883219 + G 73 -2.4 -5.00884 | AAATTGAGATGCACT TTCC TAAACC GGAA TTTTTTGAAAAAGAT Ssed_0740 881831 - 883243 + | Signal transduction histidine kinase-like protein Ssed_0741 883418 - 884050 + | response regulator receiver protein TERM 880 884287 - 884274 - g 80 -4.5 -5.00884 | ATTCCCTTTAAAAAA CTAGC ACTT GCCAG CATGATAACCATGTT Ssed_0742 884247 - 885938 + | hypothetical protein TERM 881 886012 - 885986 - T 100 -16 -3.14132 | opp_overlap 885986 TCCCTTGCCCATCAA GCCACTCCAATT AAT AATCGGAGTGGC TTTTTTTATTCTTGC TERM 882 885986 - 886012 + T 100 -13.8 -5.95946 | opp_overlap 885986 TCCCTTGCCCATCAA GCCACTCCAATT AAT AATCGGAGTGGC TTTTTTTATTCTTGC TERM 883 886563 - 886537 - T 90 -11.6 -3.92324 | TCGGGGAAGAGTAAA GCTGCCACTCCT GTG ATGAATGGCAGC CAATATGATTAACGT Ssed_0743 887664 - 886579 - | 2-alkenal reductase TERM 884 887744 - 887719 - R 72 -10.5 -2.72661 | opp_overlap 887720 887722 887726, overlap 887726 GATTAGCCCTAATTA GCATGAAGGGA CTGC TCCCTTCATGT GATCTCGACTAAGAC TERM 885 887720 - 887743 + r 91 -14 -2.63596 | opp_overlap 887719 887726, overlap 887722 887726 ATTAGCCCTAATTAG CATGAAGGGA CTGC TCCCTTCATG TGATCTCGACTAAGA TERM 886 887722 - 887741 + r 77 -10.8 -2.85999 | opp_overlap 887719 887726, overlap 887720 887726 TAGCCCTAATTAGCA TGAAGGGA CTGC TCCCTTCA TGTGATCTCGACTAA TERM 887 887786 - 887767 - R 76 -10.7 -2.705 | opp_overlap 887766 887784, overlap 887764 ACTAAGACGATAGCA GGGGAGC TGGCGT GCTCCCC CTGAGTTGACATGGG Ssed_0744 889154 - 887802 - | 2-alkenal reductase Ssed_0745 889682 - 889308 - | hypothetical protein Ssed_0746 889873 - 890979 + | AFG1 family ATPase TERM 888 891104 - 891120 + F 73 -9.5 -3.21924 | overlap 891103 ACCTGCCCTCGTTAC TCCATCA ATA TGATGGA TGTTGTAAAGCCTAA Ssed_0747 891234 - 891665 + | 50S ribosomal protein L13 Ssed_0748 891680 - 892072 + | 30S ribosomal protein S9 TERM 889 892122 - 892091 - f 76 -11 -2.57132 | opp_overlap 892092 892099, overlap 892099 TTCGCTCTCGAGAAT TCAAAAAACCCAGC TTTT GCTGGGTTTTTTAT TGCCTGAAATTTAAA TERM 890 892092 - 892121 + F 84 -12.3 -3.08966 | opp_overlap 892091 892099, overlap 892099 TCGCTCTCGAGAATT CAAAAAACCCAGC TTTT GCTGGGTTTTTTA TTGCCTGAAATTTAA TERM 891 892099 - 892114 + F 100 -10.4 -5.4833 | opp_overlap 892091 892099, overlap 892092 CGAGAATTCAAAAAA CCCAGC TTTT GCTGGG TTTTTTATTGCCTGA TERM 892 892114 - 892099 - f 100 -10.4 -5.1925 | opp_overlap 892099 892092, overlap 892091 CGAGAATTCAAAAAA CCCAGC TTTT GCTGGG TTTTTTATTGCCTGA TERM 893 892368 - 892384 + G 70 -2.1 -4.85618 | overlap 892369 892371 TTTGGGTGGTGGTTT AGTCACC GCA GGTGTCG TTTTGTTGATTATTT Ssed_0749 892237 - 892407 + | hypothetical protein Ssed_0750 892474 - 893769 + | adenylosuccinate synthetase TERM 894 893778 - 893794 + F 93 -10.8 -5.10208 | opp_overlap 893778 TAGTTAATATATAGA GGCCGC GTTAA GCGGCC TTTTTATTGGGCTTC TERM 895 893794 - 893778 - f 79 -10.8 -3.11207 | opp_overlap 893778 TAGTTAATATATAGA GGCCGC GTTAA GCGGCC TTTTTATTGGGCTTC TERM 896 894109 - 894127 + G 71 -10.3 -2.84 | opp_overlap 894107, overlap 894107 GAACTAAACAGTATC TCACCCG AGTGA CGGGTGA TGATTGTCAGCTAGT Ssed_0751 893925 - 894608 + | Sel1 domain-containing protein TERM 897 894967 - 894984 + G 71 -6.9 -4.2461 | TTCCTGAAGCTTGAG GAGGGCG GTGA CGACCTC TTTATTAATAACCGT Ssed_0752 894661 - 897162 + | exoribonuclease II Ssed_0753 897159 - 897899 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 898 897957 - 897984 + F 100 -10.6 -5.95286 | opp_overlap 897957 CCATAGTGTATCGAA TGCCGATGCGGA TTAG TCTTCATCGGCA TTTTTTGTTTTTCAT Ssed_0754 898493 - 900385 + | hypothetical protein TERM 899 900416 - 900399 - f 100 -12.7 -4.76075 | opp_overlap 900399 900413 AGGACAGCAACAAAA CCTGCGC ACCT GCGCAGG TTTCTTCACCTGTCT TERM 900 900399 - 900416 + F 100 -12.7 -4.2008 | opp_overlap 900399, overlap 900413 AGGACAGCAACAAAA CCTGCGC ACCT GCGCAGG TTTCTTCACCTGTCT Ssed_0755 900463 - 901212 + | hypothetical protein TERM 901 901239 - 901254 + T 74 -9 -3.52841 | overlap 901238 901234 GCCAGAGGGTTAATC GTGCCA TATA TGGCAC TGTTATTGGTTGTTC Ssed_0756 902337 - 901588 - | hypothetical protein Ssed_0757 902570 - 902989 + | 30S ribosomal protein S6 Ssed_0758 902998 - 903303 + | primosomal replication protein N Ssed_0759 903315 - 903542 + | ribosomal protein S18 Ssed_0760 903570 - 904022 + | 50S ribosomal protein L9 TERM 902 904079 - 904120 + T 82 -11.9 -2.98942 | gap 1, opp_overlap 904082 904087, overlap 904087 AAGTCTAAAGCTTTA AAAGAAAACACCGCGCTAAT TTA ATTAG-GCGGTGTTTTTTTA TGTCTGTAGGAAAGT TERM 903 904117 - 904082 - T 93 -11.4 -4.17089 | gap 1, opp_overlap 904079 904087, overlap 904087 TCTAAAGCTTTAAAA GAAAACACCGCGCTAAT TTA ATTAG-GCGGTGTTTTT TTATGTCTGTAGGAA TERM 904 904087 - 904112 + T 100 -11.3 -5.77988 | gap 1, opp_overlap 904082 904087, overlap 904079 AGCTTTAAAAGAAAA CACCGCGCTAAT TTA ATTAG-GCGGTG TTTTTTTATGTCTGT TERM 905 904112 - 904087 - T 95 -11.3 -5.08255 | gap 1, opp_overlap 904087 904079, overlap 904082 AGCTTTAAAAGAAAA CACCGCGCTAAT TTA ATTAG-GCGGTG TTTTTTTATGTCTGT TERM 906 904788 - 904806 + T 100 -14.6 -3.62478 | opp_overlap 904785 904784 904788 TTCCTTGAAAATCCA GGGCCTAG GTT CTAGGCCC TTTCAAACTTAATTA TERM 907 904806 - 904788 - T 95 -14.6 -2.74605 | opp_overlap 904788, overlap 904785 904784 TTCCTTGAAAATCCA GGGCCTAG GTT CTAGGCCC TTTCAAACTTAATTA Ssed_0761 907037 - 904815 - | hypothetical protein Ssed_0762 907145 - 908551 + | replicative DNA helicase Ssed_0763 908755 - 909831 + | alanine racemase TERM 908 910099 - 910083 - g 74 -9.5 -3.54022 | overlap 910081 AAACCGGGATAAACA GGAGTAA AGA TTACTCC CCCGAGTTTGTCGCC Ssed_0764 909917 - 911269 + | hypothetical protein Ssed_0765 911831 - 911367 - | putative chemotaxis protein CheX Ssed_0766 912454 - 913437 + | tRNA-dihydrouridine synthase A TERM 909 913459 - 913473 + F 100 -8.5 -6.20267 | opp_overlap 913459 TTTGACCTTTATTAA CCGCC TTTAT GGCGG TTTTTTTGTTTTTCA Ssed_0767 913721 - 914017 + | hypothetical protein Ssed_0768 914168 - 914386 + | phage shock protein C, PspC Ssed_0769 914407 - 914760 + | hypothetical protein Ssed_0770 915563 - 914823 - | enoyl-CoA hydratase/isomerase Ssed_0771 915596 - 916072 + | hypothetical protein Ssed_0772 916111 - 917082 + | hypothetical protein Ssed_0773 917090 - 917854 + | hypothetical protein TERM 910 917899 - 917869 - T 73 -10 -2.87404 | ATACTAATTAGTATA TTACTCAAATATTT GCC AAATGTTTGAGTAA TAAAAAACCGCCACT TERM 911 917931 - 917907 - T 100 -15.1 -5.5112 | opp_overlap 917907 TTGAGTAATAAAAAA CCGCCACTAAC TGA ATTAGTGGCGG TTTTTTTGTATTTAT TERM 912 917907 - 917931 + T 100 -14.4 -5.90231 | opp_overlap 917907 TTGAGTAATAAAAAA CCGCCACTAA CTGAA TTAGTGGCGG TTTTTTTGTATTTAT TERM 913 917977 - 917958 - T 72 -10 -2.67244 | opp_overlap 917960, overlap 917955 917954 TTATACCCAAACCGA GACCAAGC TTTA GCCTGGTC TAATCATCGACTTAT Ssed_0774 919314 - 917989 - | outer membrane channel protein TERM 914 919351 - 919337 - H 91 -10 -4.52589 | CCTTTTTAGACAAAA TCCTCC ACT GGAGGA GCCATTTAACTTTTA Ssed_0775 919626 - 920240 + | ADP-ribose diphosphatase TERM 915 920339 - 920353 + G 77 -4.2 -5.14985 | CCTAAGAGGTACCGG CCTGAT GTA AACAGG TTTTTATCTCTTTGC Ssed_0776 920297 - 920746 + | hypothetical protein Ssed_0777 920756 - 921595 + | calcineurin phosphoesterase C-terminal domain-containing protein Ssed_0778 921828 - 922406 + | hypothetical protein Ssed_0779 922455 - 924341 + | DNA topoisomerase IV subunit B Ssed_0780 924653 - 925816 + | L-sorbosone dehydrogenase, putative TERM 916 926099 - 926109 + G 71 -6.8 -4.26344 | AGGCTATGGTATTGA TGGC CCA GCCA TTTTCCTACAGGTAT Ssed_0781 925813 - 928086 + | DNA topoisomerase IV subunit A TERM 917 928139 - 928109 - T 100 -14.2 -3.33087 | opp_overlap 928117, overlap 928110 928117 AATAGATCTCCAGAA CTAAAAAAGCTGCC ATT GGCAGCTTTTTTAT TGAGAGGTCGGCAGT TERM 918 928138 - 928110 - T 100 -17.7 -2.5937 | opp_overlap 928117, overlap 928109 928117 ATAGATCTCCAGAAC TAAAAAAGCTGCC ATT GGCAGCTTTTTTA TTGAGAGGTCGGCAG TERM 919 928131 - 928117 - T 100 -11.4 -5.32944 | opp_overlap 928117, overlap 928110 928109 TCCAGAACTAAAAAA GCTGCC ATT GGCAGC TTTTTTATTGAGAGG TERM 920 928117 - 928131 + T 100 -11.4 -5.4505 | opp_overlap 928117 928110 928109 TCCAGAACTAAAAAA GCTGCC ATT GGCAGC TTTTTTATTGAGAGG Ssed_0782 928366 - 928175 - | BFD/(2Fe-2S)-binding domain-containing protein Ssed_0783 929530 - 928604 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Ssed_0784 929565 - 929909 + | hypothetical protein Ssed_0785 930763 - 930068 - | glycerophosphoryl diester phosphodiesterase Ssed_0786 933963 - 930763 - | MscS mechanosensitive ion channel TERM 921 932991 - 933002 + g 80 -4.4 -5.22137 | overlap 932984 GATATCTCGCCATTC TTGC ATTG GCAA TTTTGTTTTGTAGTT Ssed_0787 935010 - 934132 - | hypothetical protein TERM 922 934445 - 934434 - G 74 -4.4 -4.88067 | AGGGAGCCAGAAAAA CAGT GGCG ACTG CAGTTTGATAAAACA TERM 923 934961 - 934932 - G 78 -10.7 -3.32698 | overlap 934930 934933 TGAGTTTAGAGAAGA GTGCTGTGCCGCC AAAT AGCAGCACAGCAA GGTGTAGTTCCAATA TERM 924 934960 - 934933 - G 88 -14.2 -2.59298 | overlap 934932 934930 GAGTTTAGAGAAGAG TGCTGTGCCGCC AAAT AGCAGCACAGCA AGGTGTAGTTCCAAT Ssed_0788 935873 - 935010 - | phosphatidylserine decarboxylase TERM 925 935847 - 935857 + g 75 -5.4 -4.73108 | TTTTGGCATCATGTA TTGC AGT GCAA TTTTAATTTTGTCCA Ssed_0789 936965 - 935907 - | ribosome-associated GTPase TERM 926 937054 - 937041 - H 85 -3.8 -5.63517 | GTCTTAAACAAAAAA GCCT GAATTT AGGC AAACCGGAACAATAA Ssed_0790 937079 - 937624 + | oligoribonuclease Ssed_0791 939047 - 939502 + | hypothetical protein TERM 927 939585 - 939600 + F 89 -6.8 -5.18357 | opp_overlap 939580 939585 CTGCGACTAACTAAA GGTACC TTAG GGTGCC TTTTTTAATGGGTTC Ssed_0792 940004 - 941482 + | carbohydrate kinase, YjeF-related protein Ssed_0793 941616 - 942074 + | hypothetical protein Ssed_0794 942077 - 943399 + | N-acetylmuramoyl-L-alanine amidase TERM 928 943875 - 943902 + G 71 -4.8 -4.65895 | overlap 943877 TGCCGCCCATCCGGT TGGATCGACCGT TGAA GCCGTCGATCTG TTTTTCAATACGCCC TERM 929 945296 - 945276 - g 79 -9.7 -3.86031 | overlap 945277 TGAACTAATTAAGAA GGCCAAGGT TTT ACCTTGGCA ATCATGGCTGGAAGA TERM 930 945295 - 945277 - g 85 -13.2 -2.90896 | overlap 945276 GAACTAATTAAGAAG GCCAAGGT TTT ACCTTGGC AATCATGGCTGGAAG Ssed_0795 943453 - 945327 + | DNA mismatch repair protein MutL Ssed_0796 945335 - 946246 + | tRNA isopentenyltransferase Ssed_0797 946340 - 946621 + | RNA chaperone Hfq Ssed_0798 946641 - 947939 + | GTP-binding protein, HSR1-related Ssed_0799 947983 - 949128 + | HflK protein Ssed_0800 949131 - 950009 + | HflC protein TERM 931 950044 - 950027 - f 100 -12.7 -4.1899 | opp_overlap 950027 CCATTTGAGTTAAAA GCCCGAC TATT GTCGGGC TTTTTTTTGCTTGCA TERM 932 950027 - 950044 + F 100 -12.7 -5.95166 | opp_overlap 950027 CCATTTGAGTTAAAA GCCCGAC TATT GTCGGGC TTTTTTTTGCTTGCA Ssed_0801 950338 - 950928 + | ubiquinol--cytochrome-c reductase Ssed_0802 950928 - 952142 + | cytochrome b/b6 domain-containing protein TERM 933 952637 - 952619 - g 75 -11.8 -2.73468 | GAACATCTGCAAGGA CTTCCTGT AAA ACAGGAAG ATGGCACGACAGTCG Ssed_0803 952142 - 952843 + | cytochrome c1 TERM 934 952879 - 952907 + F 100 -17.5 -5.86609 | opp_overlap 952884 TATTATCCGCATATT GTAAACGGGGGGC TTT GCCCCTCGTTTGC TTTTTGTTTTTTTGC TERM 935 952902 - 952884 - f 88 -11.6 -3.63627 | opp_overlap 952879 TCCGCATATTGTAAA CGGGGGGC TTT GCCCCTCG TTTGCTTTTTGTTTT Ssed_0804 952952 - 953581 + | stringent starvation protein A Ssed_0805 953581 - 954039 + | ClpXP protease specificity-enhancing factor TERM 936 954080 - 954058 - f 83 -6.2 -5.03314 | opp_overlap 954061, overlap 954059 954061 CTTAGCCTCAAAAAA TTAGCCAGTC AAT GACTGGCTTT TTTATGCCTGCAGTA TERM 937 954079 - 954059 - f 77 -9.7 -3.61506 | opp_overlap 954061, overlap 954058 954061 TTAGCCTCAAAAAAT TAGCCAGTC AAT GACTGGCTT TTTTATGCCTGCAGT TERM 938 954061 - 954077 + F 100 -12.3 -5.28176 | opp_overlap 954059 954058 954061 AGCCTCAAAAAATTA GCCAGTC AAT GACTGGC TTTTTTATGCCTGCA TERM 939 954077 - 954061 - f 87 -12.3 -3.38056 | opp_overlap 954061, overlap 954059 954058 AGCCTCAAAAAATTA GCCAGTC AAT GACTGGC TTTTTTATGCCTGCA Ssed_0806 954224 - 954817 + | glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase Ssed_0807 955056 - 957539 + | peptidase S9 prolyl oligopeptidase TERM 940 957583 - 957556 - f 80 -10 -3.62522 | opp_overlap 957561, overlap 957561 TAACGGTTGGAATAA TAAAAGGTCTCT GTTT AGAGACCTTTTT TATGGAGCTTGTTGG TERM 941 957578 - 957561 - f 93 -9.9 -4.89477 | opp_overlap 957561, overlap 957556 GTTGGAATAATAAAA GGTCTCT GTTT AGAGACC TTTTTTATGGAGCTT TERM 942 957561 - 957578 + F 100 -9.9 -5.25803 | opp_overlap 957561 957556 GTTGGAATAATAAAA GGTCTCT GTTT AGAGACC TTTTTTATGGAGCTT Ssed_0808 957732 - 958874 + | putative signal transduction protein TERM 943 960523 - 960543 + G 73 -10.5 -3.17212 | overlap 960525 ACATCGCCGAAGGTT TAGCACGTT TTG AACGTGCTG TTGCTAAAGTCGTAG TERM 944 960525 - 960541 + G 76 -10.9 -3.1478 | overlap 960523 ATCGCCGAAGGTTTA GCACGTT TTG AACGTGC TGTTGCTAAAGTCGT Ssed_0809 959349 - 960566 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 945 960577 - 960601 + F 100 -8 -5.71983 | gap 1, opp_overlap 960577 CCTAAATGACTTAAA GAGTGC-TGAT TAAT ATCACGCACTC TTTTTTTGTCATTGG TERM 946 960601 - 960577 - f 70 -8 -3.74224 | gap 1, opp_overlap 960577 CCTAAATGACTTAAA GAGTGC-TGAT TAAT ATCACGCACTC TTTTTTTGTCATTGG Ssed_0810 960702 - 961721 + | arginine N-succinyltransferase TERM 947 962302 - 962287 - g 75 -10.4 -3.29461 | opp_overlap 962284 962283 GAAGCTTTGGGAGAA GGCTGG ACTA CCAGCC GGCGTTATCAATCTG TERM 948 962363 - 962377 + G 74 -2.8 -5.00884 | CTGGCATCTCACCCC CAGATT GAT GGTCTG TTTTTTACCGGAAGT Ssed_0811 961730 - 963190 + | succinylglutamic semialdehyde dehydrogenase TERM 949 963221 - 963249 + F 93 -11.1 -5.00616 | opp_overlap 963220 963221 GCTATAAAAAATGAG GTGGGAAATATCG TTA TGGTATTTCCCGC TTTTTTAGAGACACA Ssed_0812 963418 - 964215 + | hypothetical protein TERM 950 964268 - 964307 + T 79 -8.7 -4.01939 | opp_overlap 964268 964279, overlap 964272 964279 CATTGTCATAAGTTA GCCATAAAAAAGGAGCC ACAACG GGCTCCTTTTTTGTTAC TTTGCTTATAGCTTA TERM 951 964272 - 964303 + T 90 -12.5 -3.63655 | opp_overlap 964268 964279, overlap 964268 964279 GTCATAAGTTAGCCA TAAAAAAGGAGCC ACAACG GGCTCCTTTTTTG TTACTTTGCTTATAG TERM 952 964296 - 964279 - T 93 -8.4 -5.28176 | opp_overlap 964272 964268 964279, overlap 964268 GTTAGCCATAAAAAA GGAGCC ACAACG GGCTCC TTTTTTGTTACTTTG TERM 953 964279 - 964296 + T 100 -8.4 -5.59655 | opp_overlap 964279 964268, overlap 964272 964268 GTTAGCCATAAAAAA GGAGCC ACAACG GGCTCC TTTTTTGTTACTTTG Ssed_0813 965351 - 964362 - | fructose-1,6-bisphosphatase TERM 954 964736 - 964752 + g 78 -12.3 -2.73468 | overlap 964723 TGTAAGTCTGCATAG GCGCTTC CCA GAAGCGC TGGTTAGACATATTG TERM 955 965005 - 964994 - G 74 -3 -5.12617 | GAAGCACCGAAAAAA TAGT GCCC ACTA ACGAGTTAATATCTA Ssed_0814 965609 - 967906 + | peptidase S9B dipeptidylpeptidase IV subunit TERM 956 968288 - 968271 - T 100 -11.3 -5.4251 | opp_overlap 968271 TCCAGACATAAAAAA GCCAGTC GTTA GACTGGC TTTTTTAATGGATAG TERM 957 968271 - 968288 + T 95 -11.3 -5.1675 | opp_overlap 968271 TCCAGACATAAAAAA GCCAGTC GTTA GACTGGC TTTTTTAATGGATAG Ssed_0815 969054 - 968335 - | two-component response regulator Ssed_0816 969633 - 970070 + | hypothetical protein TERM 958 970142 - 970154 + F 73 -7.7 -3.94772 | overlap 970116 ATTTTTTATCATCAT TGGCA CTT TGCCA TCTTTATTTATTGAC Ssed_0817 970546 - 971898 + | aspartate kinase III Ssed_0818 971985 - 973091 + | succinylglutamate desuccinylase/aspartoacylase TERM 959 973152 - 973135 - T 100 -12.7 -5.04597 | opp_overlap 973135 AGTCACATATAAAAA GGGAGCC ATCA GGCTCCC TTTTCGGTTCAACAG TERM 960 973135 - 973152 + T 100 -12.7 -4.27316 | opp_overlap 973135 AGTCACATATAAAAA GGGAGCC ATCA GGCTCCC TTTTCGGTTCAACAG Ssed_0819 977045 - 973185 - | peptidase S8 and S53, subtilisin, kexin, sedolisin Ssed_0820 977722 - 977261 - | DNA-binding transcriptional regulator AsnC Ssed_0821 978568 - 977891 - | pseudouridylate synthase Ssed_0822 979019 - 978729 - | hypothetical protein Ssed_0823 979644 - 979093 - | methyltransferase type 12 Ssed_0824 980029 - 979619 - | hypothetical protein Ssed_0825 980258 - 981247 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 961 981285 - 981325 + F 89 -12.1 -3.70068 | opp_overlap 981300, overlap 981286 TACCTGACATCTTGA TATTTGGCTGATAGATTAA TGA TTAATCTATCAGCCGAGGG TTTAACATTATGATG TERM 962 981286 - 981324 + F 90 -13.4 -2.81559 | opp_overlap 981300, overlap 981285 ACCTGACATCTTGAT ATTTGGCTGATAGATTAA TGA TTAATCTATCAGCCGAGG GTTTAACATTATGAT TERM 963 981659 - 981672 + G 70 -2.3 -4.83615 | GCATTGGTTCACTTC GCGAG AAGT CTGGC TTTTTGTACCAGCTA Ssed_0826 981335 - 982072 + | dienelactone hydrolase TERM 964 982135 - 982154 + T 72 -3.6 -5.14563 | overlap 982137 GCATTCTTCCATCGC TTGCTTAA GTCA TTAAGCCA TTTTTTCATCGAGAG TERM 965 982207 - 982189 - T 89 -11.7 -3.456 | TAATATATTAATGAA GGGCCAC GCAGT GTGGCCC TAATCGAGATACTCC Ssed_0827 982758 - 982222 - | hypothetical protein Ssed_0828 983074 - 983817 + | spermine synthase TERM 966 983821 - 983831 + F 78 -4 -5.1861 | opp_overlap 983821 ATTTGGGAATAATAC CAAT TCA ATTG TTTTTTAGTCATAAA Ssed_0829 984038 - 984607 + | alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen TERM 967 984732 - 984746 + F 71 -4.2 -4.98522 | opp_overlap 984708, overlap 984710 984708 ACAACCCCCCTGCTA TGACCG AGC CTGTCA TTTTTATATCCCATT Ssed_0830 984810 - 986378 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 968 986404 - 986428 + F 93 -9.4 -5.07652 | opp_overlap 986404 986407 CGCTTTAACCTTAAA TAAGCCAGCT ATCAA AGTTGGCTTA TTTTGTTTTACAGAC TERM 969 986461 - 986476 + F 75 -2.5 -5.26316 | TCGTTAGATAATAAA CAGCT TAGTTT GGCTG TTTTTTCTAACCTGC Ssed_0831 986648 - 987703 + | diguanylate cyclase TERM 970 987798 - 987774 - T 89 -5.7 -5.37593 | opp_overlap 987774 987787 GGGGAAACTAAAAAA CCGTTCACC TATAGCT GGTCAACGG CTTCTATGACTGAGC Ssed_0832 988024 - 987827 - | hypothetical protein TERM 971 988156 - 988115 - R 100 -16.1 -3.18735 | opp_overlap 988125, overlap 988097 988125 TGAACATCCGATTAA TGCTCAAAAAGGGTGCC GGACGAAG GGCACCCTTTTTTAGCA GTTAAAAAGCATTAA TERM 972 988125 - 988146 + r 90 -8.7 -5.055 | opp_overlap 988125 988115 ATTAATGCTCAAAAA GGGTGCC GGACGAAG GGCACCC TTTTTTAGCAGTTAA TERM 973 988146 - 988125 - R 87 -8.7 -4.62872 | opp_overlap 988125, overlap 988115 ATTAATGCTCAAAAA GGGTGCC GGACGAAG GGCACCC TTTTTTAGCAGTTAA TERM 974 988187 - 988165 - R 75 -5.6 -4.68593 | opp_overlap 988165, overlap 988168 TTTAGCAGTTAAAAA GCATTAAAGC AGA GCTTTAACCC TTAGATTTTGCCAAT Ssed_0833 989605 - 988181 - | hypothetical protein Ssed_0834 990382 - 989927 - | hypothetical protein Ssed_0835 990773 - 991225 + | transcriptional regulator, MarR family protein Ssed_0836 991322 - 992497 + | FAD dependent oxidoreductase TERM 975 993102 - 993088 - g 93 -7.8 -5.32882 | opp_overlap 993088 TATCACCATAAAAAA CCCGGT GTA ACCGAG TTGGTGCCTAAGGTG Ssed_0837 992641 - 994305 + | methyl-accepting chemotaxis sensory transducer TERM 976 994350 - 994330 - T 100 -6.8 -5.60993 | opp_overlap 994331, overlap 994331 TTTGTGACAAAAAAA TGGGAAGC GATTA GCTTCCCT TTTTTGCTGATGGTT TERM 977 994331 - 994349 + T 100 -10.3 -5.19212 | opp_overlap 994330 994331 TTGTGACAAAAAAAT GGGAAGC GATTA GCTTCCC TTTTTTGCTGATGGT TERM 978 994349 - 994331 - T 84 -10.3 -3.95873 | opp_overlap 994331, overlap 994330 TTGTGACAAAAAAAT GGGAAGC GATTA GCTTCCC TTTTTTGCTGATGGT Ssed_0838 998709 - 994387 - | formate dehydrogenase, alpha subunit TERM 979 998290 - 998304 + g 83 -11.4 -3.61398 | TGACTGTACATCGAC GCCTGC CGG GCAGGC TTGTTGGCAGGGGGC Ssed_0839 1000048 - 999065 - | ion transport 2 domain-containing protein Ssed_0840 1000309 - 1001367 + | peptide chain release factor 2 Ssed_0841 1001438 - 1002940 + | lysyl-tRNA synthetase TERM 980 1003038 - 1003013 - f 74 -6.2 -4.4017 | opp_overlap 1003018, overlap 1003018 GGAAGGCTTATAAAA GAAAACCAGC TTAATC GCTGGTTTTT TCTTTTCTGCTTCCC TERM 981 1003033 - 1003018 - f 87 -6.1 -5.18371 | opp_overlap 1003018, overlap 1003013 GCTTATAAAAGAAAA CCAGC TTAATC GCTGG TTTTTTCTTTTCTGC TERM 982 1003018 - 1003033 + F 100 -6.1 -5.86976 | opp_overlap 1003018 1003013 GCTTATAAAAGAAAA CCAGC TTAATC GCTGG TTTTTTCTTTTCTGC Ssed_0842 1003204 - 1005657 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ssed_0843 1006353 - 1005697 - | RNA pseudouridine synthase family protein TERM 983 1007361 - 1007351 - g 75 -5.4 -4.68645 | TATCGAAAATGAAAA TCAG AAG CTGA TGGCTAAACTTCCCT Ssed_0844 1006590 - 1007378 + | glucosamine-6-phosphate isomerase Ssed_0845 1009115 - 1007379 - | diguanylate cyclase Ssed_0846 1009500 - 1009817 + | cupin 2 domain-containing protein TERM 984 1010351 - 1010365 + G 77 -4.2 -5.06414 | opp_overlap 1010346 AGATGGATAACCGCA CCGC CGAAAAA GCGG TTTTTCTTGAGCAGG Ssed_0847 1009951 - 1011867 + | peptidase U32 TERM 985 1011885 - 1011921 + F 95 -13.1 -3.53933 | opp_overlap 1011888, overlap 1011888 TTGTCGAACGTAAGG CAACCTATGGTGATTCT TTG AGTGTCCCCATAGGTTG TTCTGATCTTACTGT TERM 986 1011888 - 1011918 + F 79 -9 -3.89291 | opp_overlap 1011888, overlap 1011885 TCGAACGTAAGGCAA CCTATGGTGATTCT TTG AGTGTCCCCATAGG TTGTTCTGATCTTAC Ssed_0848 1012124 - 1012498 + | hypothetical protein TERM 987 1012555 - 1012584 + T 77 -10 -3.37761 | CGAGCTACGAGCTAC GAGCCAGGAGTT ACCAGC AGCTCCCGGCTC TTCCTCTCTTGCCCT Ssed_0849 1013843 - 1012611 - | hypothetical protein TERM 988 1013152 - 1013198 + g 78 -11.7 -2.96585 | gap 2, opp_overlap 1013190, overlap 1013146 AGTCGAGGCTTACGT GCC-GGCGCATC-ACTATCGCTT CGA AAGTGATCGTAGAAGCGCCAGGC TCTGATGTTATCTCT Ssed_0850 1014128 - 1014511 + | hypothetical protein TERM 989 1014526 - 1014551 + F 77 -9.7 -3.48772 | opp_overlap 1014526, overlap 1014549 GATTACCTTCACCAA GCATGGGAACC TGTT GTTTCCCGTGC TTGTATCAAGACATT TERM 990 1015805 - 1015821 + G 72 -10.9 -2.5805 | overlap 1015804 ACTCCTTGAGTGACT TTGAGCG TGC CGCTCAA CTTATGCCAAATGAT TERM 991 1015975 - 1015959 - g 77 -6.5 -4.54306 | opp_overlap 1015958 1015959 TGCAATAAAAAAAGA GCCAAGC AAT GCTTTGC ATTATTACAGTCGAT Ssed_0851 1014679 - 1016313 + | hypothetical protein TERM 992 1016328 - 1016293 - f 93 -13.6 -3.14132 | opp_overlap 1016295 1016302, overlap 1016295 1016302 1016307 CTGGCTTTCTATGAA GAGTTAAAACAGAAGT TATA ACTTCTGTTTTAACTA TGGAAGACTAACAAC TERM 993 1016326 - 1016295 - f 100 -16.2 -3.13403 | opp_overlap 1016295 1016302, overlap 1016293 1016302 1016307 GGCTTTCTATGAAGA GTTAAAACAGAAGT TATA ACTTCTGTTTTAAC TATGGAAGACTAACA TERM 994 1016319 - 1016302 - f 82 -8.5 -4.29325 | opp_overlap 1016295 1016302, overlap 1016295 1016293 1016307 TATGAAGAGTTAAAA CAGAAGT TATA ACTTCTG TTTTAACTATGGAAG TERM 995 1016302 - 1016319 + F 82 -8.5 -4.2349 | opp_overlap 1016302 1016295 1016293 1016307, overlap 1016295 TATGAAGAGTTAAAA CAGAAGT TATA ACTTCTG TTTTAACTATGGAAG Ssed_0852 1016452 - 1016742 + | lipoprotein Ssed_0853 1017200 - 1016763 - | Fe-S metabolism associated SufE TERM 996 1016818 - 1016859 + g 74 -10.9 -2.99947 | overlap 1016817 CCATTGGTGCGAGAC GGGCTAAGTTGACCCGTTA ATCC TAGCTGGTCAAAGTAGCCC TCTATATCAAAATTG TERM 997 1017048 - 1017067 + g 71 -7.2 -4.07568 | gap 1, opp_overlap 1017045 TTCTATACGAAACTC CTC-GCCTA GCT TAGGCAGAG TTTTCCCAAGCAGCA Ssed_0854 1018583 - 1017372 - | aminotransferase, class V TERM 998 1018613 - 1018642 + r 100 -15.1 -3.0464 | opp_overlap 1018613 GTTCATAACAAAAAA GGCGTTGTGATCT TCGG AGATCTCAACGCC TATTGCAAGTGGCTT TERM 999 1018642 - 1018613 - R 100 -15.1 -5.55769 | opp_overlap 1018613 GTTCATAACAAAAAA GGCGTTGTGATCT TCGG AGATCTCAACGCC TATTGCAAGTGGCTT Ssed_0855 1019823 - 1018780 - | aldo/keto reductase Ssed_0856 1021106 - 1020048 - | MarR family transcriptional regulator Ssed_0857 1021868 - 1021299 - | NTPase TERM 1000 1021630 - 1021620 - G 71 -6.8 -4.1822 | TTCCATCGCAACAAA CAGC TCT GCTG AGTGAACGTTTGAAT Ssed_0858 1022469 - 1023740 + | aromatic amino acid permease TERM 1001 1023770 - 1023796 + F 100 -16 -3.98747 | overlap 1023760 ATCATGCTTGTTATA GGGTCAGTACTG TTT TAGTACTGACCC TTTCCTGCTTTTTTA Ssed_0859 1023825 - 1025192 + | L-serine ammonia-lyase TERM 1002 1025228 - 1025196 - T 71 -5 -4.56775 | gap 2, opp_overlap 1025199 1025200 1025201, overlap 1025197 1025198 1025225 ATCTGTGCTTAAAAA TGCCCCTAGGTTCTAG TTT CTAGAACCTAG-G-CT TTAAACCCGGCAGTT TERM 1003 1025227 - 1025197 - T 70 -8.5 -3.33744 | gap 2, opp_overlap 1025199 1025200 1025201, overlap 1025196 1025198 1025225 TCTGTGCTTAAAAAT GCCCCTAGGTTCTAG TTT CTAGAACCTAG-G-C TTTAAACCCGGCAGT TERM 1004 1025228 - 1025198 - T 79 -11.2 -2.60032 | opp_overlap 1025199 1025200 1025201, overlap 1025197 1025196 1025225 CTGTGCTTAAAAATG CCCCTAGGTTCTAG TTT CTAGAACCTAGGCT TTAAACCCGGCAGTT TERM 1005 1025199 - 1025227 + T 100 -14.7 -3.53091 | opp_overlap 1025197 1025196 1025198 1025225, overlap 1025200 1025201 TGTGCTTAAAAATGC CCCTAGGTTCTAG TTT CTAGAACCTAGGC TTTAAACCCGGCAGT TERM 1006 1025200 - 1025226 + T 100 -18.2 -2.71712 | opp_overlap 1025197 1025196 1025198 1025225, overlap 1025199 1025201 GTGCTTAAAAATGCC CCTAGGTTCTAG TTT CTAGAACCTAGG CTTTAAACCCGGCAG Ssed_0860 1025698 - 1025255 - | GCN5-related N-acetyltransferase TERM 1007 1025912 - 1025927 + H 71 -7.6 -3.82205 | AACGCTGCCCTACTG GCTCAT CTCA ATGAGC TTATTGCTGTGTTAC Ssed_0861 1026119 - 1026481 + | hypothetical protein Ssed_0862 1026798 - 1028147 + | sodium:dicarboxylate symporter TERM 1008 1028214 - 1028227 + T 100 -9.5 -5.94597 | opp_overlap 1028214 TCGTGAGAAAAAAAA CCGCC GAAT GGCGG TTTTTTTTAATGTTC TERM 1009 1028227 - 1028214 - T 100 -9.5 -5.93809 | opp_overlap 1028214 TCGTGAGAAAAAAAA CCGCC GAAT GGCGG TTTTTTTTAATGTTC Ssed_0863 1028675 - 1028262 - | protein of unknown function DUF306, MetA and HslJ Ssed_0864 1028765 - 1028980 + | hypothetical protein Ssed_0865 1029942 - 1028998 - | diguanylate cyclase Ssed_0866 1031184 - 1030174 - | GGDEF domain-containing protein TERM 1010 1030263 - 1030281 + g 77 -3.9 -5.09173 | gap 1, overlap 1030252 1030250 CCGCCTCAAGTTTGT GGAGCTCA GATT TGAG-TCC TTTTTTCGACTCTTC TERM 1011 1031300 - 1031318 + H 78 -11 -2.92656 | opp_overlap 1031291 1031292, overlap 1031287 TATAAATGTGGGCTA GGGCTGGT ATA ATCAGCCC TATCTCAATAAATTT Ssed_0867 1031359 - 1031916 + | acetyltransferase Ssed_0868 1031930 - 1032319 + | hypothetical protein Ssed_0869 1033362 - 1032397 - | response regulator TERM 1012 1034932 - 1034942 + G 71 -6.8 -4.31164 | GATCGGCAAGGCGAG CCCA TTG TGGG TTTATATTGTGTCGG Ssed_0870 1033432 - 1035081 + | putative fumarate reductase flavoprotein TERM 1013 1036258 - 1036285 + G 77 -4.8 -5.00616 | overlap 1036259 1036261 TCGATGACGATGCCT ATGTGGTTGCCG ATGA CGGGAACCATAC TTTTTTAACCGCCGA Ssed_0871 1035108 - 1036838 + | thiamine pyrophosphate enzyme-like TPP binding protein Ssed_0872 1037969 - 1036941 - | uncharacterized FlgJ-related protein-like protein TERM 1014 1037129 - 1037147 + g 76 -8.8 -3.96892 | TGTTCTGCCTGAGTT CTGCGCGA AGA TGGCGCAG TTTCTGGTAGGCATT TERM 1015 1038166 - 1038179 + r 71 -9.5 -2.836 | opp_overlap 1038166, overlap 1038165 TCAGGCATAAAAAAA CCGCC CAAA GGCGG CTTCTTAACTGTTAG TERM 1016 1038179 - 1038166 - R 100 -9.5 -5.64274 | opp_overlap 1038166 1038165 TCAGGCATAAAAAAA CCGCC CAAA GGCGG CTTCTTAACTGTTAG Ssed_0873 1039374 - 1038223 - | S-adenosylmethionine synthetase TERM 1017 1038652 - 1038636 - G 74 -9.5 -3.54297 | AGGTATCAACGATAA TCTTACG ACC CGTAAGA CCACAATCACCCATA TERM 1018 1039507 - 1039534 + H 75 -2.6 -5.28561 | overlap 1039512 GCTCAGTATTCCTGT CATAAGCTCAGG ATAA CTTGGGCATCTG TTTTTATTATCTCTT TERM 1019 1040013 - 1039997 - g 70 -8 -3.83154 | opp_overlap 1040003 1040008 1040009 1040011 TAAGCACAACCCAAA CAACCC TGAAT GGGTTG ATCGCGACCGTTTCA TERM 1020 1040924 - 1040904 - g 73 -8.1 -3.96624 | overlap 1040914 GAGTGTCAGGATAAA GCGGAAGGC ATT GCCAGCCGC AAAGCATCACAAAAT Ssed_0874 1039848 - 1041839 + | transketolase TERM 1021 1041915 - 1041957 + F 80 -10.1 -3.78953 | gap 1, opp_overlap 1041914 1041913 1041908 TAGCCAAAGCAAATC GTGATGCACTTTGATTATCA AGCT TGATAA-CTAAGTGCATCCC TTTGCTGATAAAGAT TERM 1022 1042030 - 1042059 + F 95 -13.7 -3.48593 | opp_overlap 1042033, overlap 1042033 TCTATGCACATGTTA TAACGGCTTACCT AGGA AGGTAGGCCGTTG TTGTATCAAAAAATG TERM 1023 1042033 - 1042056 + F 100 -13.2 -3.88232 | opp_overlap 1042033, overlap 1042030 ATGCACATGTTATAA CGGCTTACCT AGGA AGGTAGGCCG TTGTTGTATCAAAAA TERM 1024 1042056 - 1042033 - f 80 -11 -3.3514 | opp_overlap 1042030 1042033 ATGCACATGTTATAA CGGCTTACCT AGGA AGGTAGGCCG TTGTTGTATCAAAAA Ssed_0875 1042100 - 1043122 + | erythrose 4-phosphate dehydrogenase Ssed_0876 1043400 - 1044575 + | phosphoglycerate kinase Ssed_0877 1044805 - 1045869 + | fructose-1,6-bisphosphate aldolase TERM 1025 1045903 - 1045921 + F 93 -8.1 -5.42975 | opp_overlap 1045903, overlap 1045905 ACAACTTATCTTAAA TGCCCGC CTAGT GCGGGTA TTTTTATTTCTGTCA TERM 1026 1045905 - 1045919 + F 85 -8.5 -4.33302 | opp_overlap 1045903, overlap 1045903 AACTTATCTTAAATG CCCGC CTAGT GCGGG TATTTTTATTTCTGT Ssed_0878 1046084 - 1046824 + | hypothetical protein TERM 1027 1046849 - 1046862 + F 100 -8.1 -5.55769 | opp_overlap 1046849 AGTGACATCTGATAA GCACC TTCG GGTGC TTTTTTATTGTAAAA Ssed_0879 1047092 - 1047838 + | hypothetical protein Ssed_0880 1047831 - 1048364 + | hypothetical protein TERM 1028 1048722 - 1048708 - T 80 -10 -3.62591 | CTCAGAAGCGCTAAA TCGCTC GCT GAGCGA TCACATCTTTATACG TERM 1029 1049138 - 1049120 - T 100 -10.3 -5.67967 | ATGAGCACAAAAAAA GGAGAGG GGATA CCTCTCC AAAGTGGGGACGATA Ssed_0881 1049909 - 1049328 - | hypothetical protein Ssed_0882 1050700 - 1049876 - | cytochrome c, putative TERM 1030 1050880 - 1050864 - H 71 -3.7 -4.91109 | GGTTGATTAGAAAAA TCTTTTG AAT CAAATGA GAGCAGGAATGATGT TERM 1031 1051600 - 1051576 - g 71 -9.3 -3.55761 | opp_overlap 1051572 TACCCAGTTTTCAAA GTGTGGTTCGA CTA CCGAACCATAC AATGTTACTCCGATA Ssed_0883 1051175 - 1051909 + | response regulator receiver protein Ssed_0884 1051902 - 1052423 + | hypothetical protein Ssed_0885 1052605 - 1053990 + | hypothetical protein Ssed_0886 1056251 - 1054035 - | putative PAS/PAC sensor protein Ssed_0887 1057078 - 1056404 - | radical SAM domain-containing protein TERM 1032 1057153 - 1057179 + r 95 -13.8 -3.71593 | opp_overlap 1057158, overlap 1057158 CTGTCGGTCAGATCG AAAAAGGGAGGC TAT GCCTCCCTTTTA TTCTATCTCTATTTT TERM 1033 1057158 - 1057174 + r 100 -13.7 -4.88495 | opp_overlap 1057158, overlap 1057153 GGTCAGATCGAAAAA GGGAGGC TAT GCCTCCC TTTTATTCTATCTCT TERM 1034 1057174 - 1057158 - R 100 -13.7 -4.70659 | opp_overlap 1057153 1057158 GGTCAGATCGAAAAA GGGAGGC TAT GCCTCCC TTTTATTCTATCTCT Ssed_0888 1060372 - 1057205 - | acriflavin resistance protein TERM 1035 1059059 - 1059077 + g 74 -3 -5.07107 | opp_overlap 1059052 GGTTAATACCCCGAA GGTGGCTG GCA TGGCGACC TTTTTTGCGCCTTTA TERM 1036 1059944 - 1059964 + g 71 -8.3 -3.72695 | opp_overlap 1059943 ACCATAGACAGAGAC CCAGATAAC ATT GTTTTCTGG TTTGATACGGAAGAT Ssed_0889 1061589 - 1060372 - | RND family efflux transporter MFP subunit TERM 1037 1061228 - 1061250 + g 73 -9.8 -3.36785 | opp_overlap 1061220 TCTAAAGCTGCTTGC GCTTGGGCCA AGC TGGCCTGGGC TTGATTGAGATCTGC TERM 1038 1061919 - 1061901 - R 100 -14.6 -5.81412 | opp_overlap 1061903 TTCAGGCAAAAAAAA GAGCCGCT GAT AGCGGCTC TCATAATAAAATTTA TERM 1039 1061903 - 1061917 + r 80 -11.4 -2.83012 | opp_overlap 1061901 CAGGCAAAAAAAAGA GCCGCT GAT AGCGGC TCTCATAATAAAATT TERM 1040 1061957 - 1061967 + r 100 -4 -6.47325 | ACTAAATGCTTACAT GTAA GGC TTAC TTTTTTTTCTTTTTT Ssed_0890 1063190 - 1061964 - | ATP-dependent RNA helicase SrmB Ssed_0891 1064044 - 1063310 - | methyltransferase small Ssed_0892 1064519 - 1065850 + | branched-chain amino acid transport system II carrier protein TERM 1041 1065920 - 1065891 - f 100 -12.9 -3.99985 | overlap 1065892 TATATACCCAAACAA CCTCGACATGCAG GATT CAGCATGTCGAGA AGTGACAGAGTTCAA TERM 1042 1065919 - 1065892 - f 95 -14.2 -2.99268 | overlap 1065891 ATATACCCAAACAAC CTCGACATGCAG GATT CAGCATGTCGAG AAGTGACAGAGTTCA TERM 1043 1065968 - 1065983 + F 70 -9 -3.15574 | overlap 1065969 GCATTAACGACATTC CCACCA TCCG TGGTGG TCTTCATGAAATTGC TERM 1044 1066224 - 1066201 - f 100 -16.8 -3.88232 | opp_overlap 1066201 TTGGGTATATAATAA GGCGTAGCTG TTTT CAGCTACGCC TTTTTTATTAAAATT TERM 1045 1066201 - 1066224 + F 100 -16.8 -5.4756 | opp_overlap 1066201 TTGGGTATATAATAA GGCGTAGCTG TTTT CAGCTACGCC TTTTTTATTAAAATT Ssed_0893 1066274 - 1067188 + | tyrosine recombinase XerD TERM 1046 1067783 - 1067765 - g 80 -6.6 -4.78764 | overlap 1067767 CAAAGGGATGAAAAA CCTGACCG AGG CGGCCATG GCGGGTCCTCGTATG TERM 1047 1068104 - 1068094 - g 75 -5.4 -4.67011 | opp_overlap 1068094 AATGTGATGCAAAAA TTGC AGA GCAA TATCATCTTGGACAG Ssed_0894 1067490 - 1068227 + | thiol:disulfide interchange protein DsbC TERM 1048 1068249 - 1068265 + F 100 -13.7 -5.47431 | opp_overlap 1068249 TTGCTTCTATTAAAA GGCGAGC TTA GCTCGCC TTTTTTGTGTCTTAG TERM 1049 1068265 - 1068249 - f 100 -13.7 -4.25104 | opp_overlap 1068249 TTGCTTCTATTAAAA GGCGAGC TTA GCTCGCC TTTTTTGTGTCTTAG TERM 1050 1069427 - 1069448 + G 73 -5.1 -4.56775 | gap 1, opp_overlap 1069427, overlap 1069432 GAGCTCAATGAAGAG GAGC-TTCCC TGG GGGATTGCTC TTTTTCAAGAGGACT Ssed_0895 1068380 - 1070104 + | single-stranded-DNA-specific exonuclease RecJ TERM 1051 1070108 - 1070129 + F 85 -8.7 -4.3179 | overlap 1070110 GAGGCAATGTAGTTC GTCGGTGTA AGGA TACACCGTC TTTATCCTTTTTTAG TERM 1052 1070110 - 1070127 + F 79 -9.9 -3.73262 | overlap 1070108 GGCAATGTAGTTCGT CGGTGTA AGGA TACACCG TCTTTATCCTTTTTT TERM 1053 1070251 - 1070275 + F 87 -12.3 -3.28712 | opp_overlap 1070256, overlap 1070254 1070256 CTTCGGTGACTCGGT GAATAGAAACC TAT GGTTTCTGTTC TTATGAACGAGCGGC TERM 1054 1070254 - 1070272 + F 70 -8.2 -3.78934 | opp_overlap 1070256, overlap 1070251 1070256 CGGTGACTCGGTGAA TAGAAACC TAT GGTTTCTG TTCTTATGAACGAGC TERM 1055 1070256 - 1070270 + F 72 -8.6 -3.4811 | opp_overlap 1070256, overlap 1070254 1070251 GTGACTCGGTGAATA GAAACC TAT GGTTTC TGTTCTTATGAACGA Ssed_0896 1071155 - 1072030 + | LysR family transcriptional regulator TERM 1056 1072105 - 1072121 + F 71 -9.5 -2.88822 | TATTGGAAACGTGGT TGAAGGT TTT ACCTTCA TGATTATCTAACGCC Ssed_0897 1072670 - 1073674 + | hypothetical protein TERM 1057 1073701 - 1073733 + T 83 -7.2 -4.79451 | gap 2, opp_overlap 1073689, overlap 1073700 CAATTAAGAGTGACT CCCAACGCTTGGCACT TTC AGT-TCAAG-GTTGGG TTTTGTGTTTACGGT TERM 1058 1074168 - 1074185 + T 84 -12.7 -3.05715 | opp_overlap 1074168 TCCATGTACAAAAAA GCCACCC GAAA GGGTGGC TTAGCTAAACAAGTT TERM 1059 1074185 - 1074168 - T 100 -12.7 -5.28176 | opp_overlap 1074168 TCCATGTACAAAAAA GCCACCC GAAA GGGTGGC TTAGCTAAACAAGTT Ssed_0898 1074910 - 1074254 - | ribose-5-phosphate isomerase A TERM 1060 1075047 - 1075060 + r 70 -3.1 -5.00616 | gap 1, overlap 1075024 1075057 GCCTGCATGTTTGTA GCC-AC CAG GTCGGC TTTTTTGAGAAGCGG Ssed_0899 1075977 - 1075093 - | hypothetical protein TERM 1061 1076425 - 1076443 + G 70 -8.1 -3.89524 | overlap 1076421 TATCTTAGTACCGGC GGCGCTG CTTAT CAGTGCC TTTATCCCCTGGGCT Ssed_0900 1076201 - 1077133 + | hypothetical protein Ssed_0901 1078106 - 1077198 - | LysR family transcriptional regulator TERM 1062 1077804 - 1077788 - G 100 -10.1 -4.7373 | TCACGGGAGCAAAAA GCTCGGC GCT GCCAAGC GGAGCCAGACCAAGC Ssed_0902 1078213 - 1078647 + | LrgA family protein Ssed_0903 1078648 - 1079337 + | LrgB family protein TERM 1063 1080113 - 1080125 + G 71 -4.1 -4.67943 | opp_overlap 1080103 1080108, overlap 1080096 ACTCATACGAGCCGC GTATG CGT CATGC TTTTATCTCTTACAA Ssed_0904 1079782 - 1080852 + | hypothetical protein TERM 1064 1081076 - 1081093 + T 71 -7 -4.07687 | opp_overlap 1081067 1081078 ACTTAACTCCCACAG CATGGC AGGTTC GCCATG TTTTCCCCGAAGCAT TERM 1065 1081097 - 1081124 + T 93 -7 -5.47218 | overlap 1081099 AGGTTCGCCATGTTT TCCCCGAAGC ATGACCCC GCTTCGGGTA TTTTTTTCAATAGAG TERM 1066 1081099 - 1081122 + T 90 -9.6 -4.37763 | overlap 1081097 GTTCGCCATGTTTTC CCCGAAGC ATGACCCC GCTTCGGG TATTTTTTTCAATAG Ssed_0905 1081790 - 1081170 - | putative nitrate/nitrite DNA-binding response regulator Ssed_0906 1083196 - 1081787 - | sensor histidine kinase TERM 1067 1084065 - 1084078 + G 74 -9.5 -3.61232 | overlap 1084064 1084074 CTCTGCAATTTTAAC CGGCC TGGC GGCCG TGTTTGTCTGGCAGA TERM 1068 1084074 - 1084104 + G 73 -5.4 -4.57569 | overlap 1084065 1084064 TTTAACCGGCCTGGC GGCCGTGTTTGTCT GGC AGATGGATACGACC TTTTTGGCGGCATCC TERM 1069 1084202 - 1084229 + G 72 -6.2 -4.33274 | gap 1, overlap 1084204 ATACCCTTAAGTATT CAGGCGCG-ATGG ATA CCATTCGCGCAGG TTTTACTAATATCAG Ssed_0907 1083952 - 1085595 + | L-lactate permease TERM 1070 1085611 - 1085639 + F 76 -11.1 -2.50016 | opp_overlap 1085610 1085613, overlap 1085610 1085608 1085613 1085613 AAAGTAATACTCAAT CAGTCAGAGCC ACACTCC GGCTTTGACTG CTCTTAATCATAGCG TERM 1071 1086490 - 1086501 + G 71 -7.2 -4.08216 | CCAAATTTAAGGCTT CGGC CCTG GCCG TTTTCCACAACATGG Ssed_0908 1085664 - 1088492 + | FAD linked oxidase domain-containing protein TERM 1072 1088518 - 1088535 + T 100 -12.7 -5.5112 | opp_overlap 1088518 GCTACAATAAAAAAA GGGGCTG ATTT CAGCCCC TTTTTTGTTGGTGCA TERM 1073 1088535 - 1088518 - T 100 -12.7 -5.88565 | opp_overlap 1088518 GCTACAATAAAAAAA GGGGCTG ATTT CAGCCCC TTTTTTGTTGGTGCA Ssed_0909 1088991 - 1088572 - | CBS domain-containing protein TERM 1074 1088710 - 1088724 + g 77 -6.4 -4.60041 | GACGATAGAGAGGGG CTCATC TTC GGTGAG TTTTTGAAACTCGGT TERM 1075 1090798 - 1090811 + G 75 -5.9 -4.4891 | opp_overlap 1090797 1090798 CTTAAGTACACTAAC CTGCG TGAT CGCGG TTTTATGGTGCTAAC Ssed_0910 1089193 - 1090962 + | alkaline phosphatase TERM 1076 1090994 - 1091011 + F 93 -12.7 -4.03234 | opp_overlap 1090994 ATAAGCTCCTAACCA GCCACCC CTTC GGGTGGC TTTCTATACAGGGAC TERM 1077 1091011 - 1090994 - f 83 -12.7 -2.72558 | opp_overlap 1090994 ATAAGCTCCTAACCA GCCACCC CTTC GGGTGGC TTTCTATACAGGGAC TERM 1078 1091195 - 1091220 + F 77 -7.7 -4.15453 | overlap 1091198 TCGGTGCCTACACTT TAACCTGTTAA TTTT TTAACCGGTTA TTTTGCGGTACATTC Ssed_0911 1091301 - 1091861 + | hypoxanthine-guanine phosphoribosyltransferase TERM 1079 1091899 - 1091921 + T 100 -17.8 -5.24129 | TTAAAGCTTTTGTCA GGCCATCACC TAA GGTGATGGCC TTTTTTGTGGGCGAA Ssed_0912 1092187 - 1091975 - | hypothetical protein Ssed_0913 1095062 - 1092423 - | aminopeptidase N TERM 1080 1095196 - 1095170 - R 100 -19.6 -4.3851 | opp_overlap 1095172 1095192 TAGAGTAAATAGAAA GATGCCAGTCAG GGG CTGACTGGCATC TTAAAAAGAGCTTGT TERM 1081 1095172 - 1095194 + r 100 -16.4 -3.02043 | opp_overlap 1095170, overlap 1095192 GAGTAAATAGAAAGA TGCCAGTCAG GGG CTGACTGGCA TCTTAAAAAGAGCTT Ssed_0914 1095859 - 1095254 - | hypothetical protein Ssed_0915 1097237 - 1095870 - | TPR repeat-containing protein TERM 1082 1097192 - 1097174 - G 74 -3 -5.12068 | overlap 1097175 GATAGTTAATAAAAA TGCTGTTC AGT GCACAGCC ACTGACTAAAAGGCT TERM 1083 1097499 - 1097446 - R 95 -14.1 -3.0274 | gap 1, opp_overlap 1097446 1097448 1097449 1097454, overlap 1097443 1097454 TAAAATCAAGAATTA TCACCAAACCACTTCAC-AATGCCCG ATT CAGCCACTCGTGAAGTGGTTTGGCTA TTAATATATATATAT TERM 1084 1097448 - 1097497 + r 75 -10.1 -3.24637 | gap 1, opp_overlap 1097446 1097443 1097454, overlap 1097446 1097449 1097454 AAATCAAGAATTATC ACCAAACCACTTCAC-AATGCCCG ATT CAGCCACTCGTGAAGTGGTTTGGC TATTAATATATATAT TERM 1085 1097449 - 1097496 + r 91 -13.6 -2.54059 | gap 1, opp_overlap 1097446 1097443 1097454, overlap 1097448 1097446 1097454 AATCAAGAATTATCA CCAAACCACTTCAC-AATGCCCG ATT CAGCCACTCGTGAAGTGGTTTGG CTATTAATATATATA TERM 1086 1097491 - 1097454 - R 86 -10.7 -3.82433 | gap 1, opp_overlap 1097449 1097448 1097446 1097454, overlap 1097446 1097443 AGAATTATCACCAAA CCACTTCAC-AATGCCCG ATT CAGCCACTCGTGAAGTGG TTTGGCTATTAATAT Ssed_0916 1097726 - 1097514 - | SlyX family protein Ssed_0917 1098694 - 1097735 - | WD-40 repeat-containing protein TERM 1087 1097864 - 1097877 + g 73 -4.5 -4.75404 | TTTGGTTCGTTGAAC TTGCC AGTT GGCGA TTTTTCGTCCGGTTT TERM 1088 1099007 - 1098993 - g 100 -5.6 -5.66229 | overlap 1099002 ACCAAGAACAAAAAA CAGCTG AAA CTGCTG CCAATGTCGAATTGA Ssed_0918 1098917 - 1099696 + | peptidylprolyl isomerase, FKBP-type TERM 1089 1099780 - 1099803 + F 100 -14.6 -5.97575 | opp_overlap 1099779 1099778 GAACCCTGAATAATT CGGTAGCTGC TTCT GCAGCTGCCG TTTTTTTTATCAATT Ssed_0919 1099834 - 1101000 + | nucleotide sugar dehydrogenase TERM 1090 1101062 - 1101018 - T 81 -11.8 -2.53263 | opp_overlap 1101030, overlap 1101030 TTTAGGTTTAATCTA TGTTTAAAAAAATGCAGGAT GATTA ATCCTGCATTTTTTTAAAGT TTTTCTGTGATCTAA TERM 1091 1101050 - 1101030 - T 100 -9.8 -5.42259 | opp_overlap 1101030, overlap 1101018 CTATGTTTAAAAAAA TGCAGGAT GATTA ATCCTGCA TTTTTTTAAAGTTTT TERM 1092 1101030 - 1101050 + T 100 -9.8 -5.51165 | opp_overlap 1101030 1101018 CTATGTTTAAAAAAA TGCAGGAT GATTA ATCCTGCA TTTTTTTAAAGTTTT TERM 1093 1101217 - 1101201 - T 82 -7.9 -4.65895 | opp_overlap 1101201, overlap 1101203 GTTGGCAGTCAAAAA CACGCCT AAC AGGCGAG TTTTAGCGCATCCGA TERM 1094 1101201 - 1101217 + T 75 -7.9 -4.09685 | opp_overlap 1101201 1101203 GTTGGCAGTCAAAAA CACGCCT AAC AGGCGAG TTTTAGCGCATCCGA TERM 1095 1101215 - 1101203 - T 79 -9.1 -3.94812 | opp_overlap 1101201, overlap 1101201 TGGCAGTCAAAAACA CGCCT AAC AGGCG AGTTTTAGCGCATCC Ssed_0920 1101830 - 1101393 - | hypothetical protein TERM 1096 1101579 - 1101569 - G 71 -8.2 -3.65902 | opp_overlap 1101569 GGTAGGCGATTGAAA GCGG GAG CCGC TTGAGTGCCATCACC Ssed_0921 1102180 - 1101818 - | hypothetical protein Ssed_0922 1103820 - 1102180 - | 4-amino-4-deoxy-L-arabinose transferase TERM 1097 1103796 - 1103781 - G 100 -6.1 -5.9873 | opp_overlap 1103781 GCATTATAAAAAAAA GCGGT ACAATG ACCGC TAGATTAATTTTTGA Ssed_0923 1104749 - 1103832 - | polysaccharide deacetylase Ssed_0924 1106728 - 1104746 - | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase Ssed_0925 1107765 - 1106770 - | glycosyl transferase, group 2 family protein Ssed_0926 1108931 - 1107765 - | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase TERM 1098 1108313 - 1108343 + g 79 -11.8 -3.09635 | opp_overlap 1108308 1108313, overlap 1108315 GACCATGAAACTTAA GACGACGAATACGC GCC GCGAGTTCGGCGTC TTGGGTGGTAAAGAT TERM 1099 1108343 - 1108313 - G 73 -9.6 -3.31415 | opp_overlap 1108313 1108315, overlap 1108308 GACCATGAAACTTAA GACGACGAATACGC GCC GCGAGTTCGGCGTC TTGGGTGGTAAAGAT Ssed_0927 1109747 - 1110217 + | hypothetical protein Ssed_0928 1110346 - 1110720 + | hypothetical protein TERM 1100 1110757 - 1110741 - T 100 -13.7 -5.4833 | opp_overlap 1110741 GGATGTAATAAAAAA GGCAGCC ACT GGCTGCC TTTTTTATATAAATC TERM 1101 1110741 - 1110757 + T 100 -13.7 -5.38047 | opp_overlap 1110741 GGATGTAATAAAAAA GGCAGCC ACT GGCTGCC TTTTTTATATAAATC Ssed_0929 1111411 - 1110782 - | two component LuxR family transcriptional regulator Ssed_0930 1113203 - 1111500 - | nitrate/nitrite sensor protein NarQ TERM 1102 1112483 - 1112500 + g 74 -4.1 -4.90471 | TGAGCTCGTCATTGG CACGTGT TAGC GCATGTG TTTTCTCTTTTACCT TERM 1103 1113349 - 1113364 + H 74 -9 -3.49168 | opp_overlap 1113349, overlap 1113347 ATACTTTGCAACGGA TACCCC CTTA GGGGTA TATTTAAATTGTCAT Ssed_0931 1113449 - 1114849 + | cytochrome c nitrite reductase TERM 1104 1114917 - 1114896 - T 100 -15.9 -4.3467 | opp_overlap 1114896 ACCTGCATAGCAAAA GCCCTCGTC ATAC GACGAGGGC TTTTTTATTGGTATT TERM 1105 1114896 - 1114917 + T 100 -15.9 -5.54885 | opp_overlap 1114896 ACCTGCATAGCAAAA GCCCTCGTC ATAC GACGAGGGC TTTTTTATTGGTATT Ssed_0932 1115575 - 1115033 - | isochorismatase hydrolase Ssed_0933 1115849 - 1116187 + | nitrogen regulatory protein P-II TERM 1106 1116614 - 1116630 + G 77 -6.5 -4.61199 | overlap 1116615 GCATTCTTGGCTTTT TCCGTCG TAA TGACGGG TTTTATCTATCCGGT Ssed_0934 1116200 - 1117450 + | Rh family protein/ammonium transporter TERM 1107 1117504 - 1117475 - f 100 -15.9 -4.07568 | opp_overlap 1117475 CTTGGTGGCTGAAAA CAGGGCTTATACC GATT GGTATAAACCCTG TTTTTTTGTATGATG TERM 1108 1117475 - 1117504 + F 100 -13.7 -5.74122 | opp_overlap 1117475 CTTGGTGGCTGAAAA CAGGGCTTATACC GATT GGTATAAACCCTG TTTTTTTGTATGATG Ssed_0935 1117568 - 1117924 + | hypothetical protein Ssed_0936 1118048 - 1119214 + | TPR repeat-containing protein Ssed_0937 1119912 - 1120970 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1109 1120999 - 1121014 + T 93 -10.4 -4.72272 | opp_overlap 1120999 TAACGAGTAAAAAAA GGAGGC TGAT GCCTCC TTTTTAGTCAAAAAA TERM 1110 1121014 - 1120999 - T 100 -10.4 -5.58074 | opp_overlap 1120999 TAACGAGTAAAAAAA GGAGGC TGAT GCCTCC TTTTTAGTCAAAAAA Ssed_0938 1121284 - 1121108 - | hypothetical protein TERM 1111 1121173 - 1121185 + g 77 -4.1 -5.12068 | opp_overlap 1121167, overlap 1121167 CAAACGAAGCAATAA GGTTA TTT TGACC TTTTTGTTGAATATC Ssed_0939 1121661 - 1123433 + | ABC transporter-related protein Ssed_0940 1123593 - 1123856 + | hypothetical protein Ssed_0941 1124939 - 1124394 - | hypothetical protein Ssed_0942 1125081 - 1125665 + | hypothetical protein TERM 1112 1125688 - 1125701 + F 100 -8.1 -5.82281 | AACATCTTATTTTAA GCCTC ATTA GAGGC TTTTTTTATCTCTTT Ssed_0943 1125783 - 1126532 + | oxidoreductase FAD/NAD(P)-binding subunit Ssed_0944 1126601 - 1127194 + | glutathione S-transferase domain-containing protein Ssed_0945 1127421 - 1128428 + | extracellular solute-binding protein TERM 1113 1128454 - 1128470 + F 100 -10.1 -5.54907 | opp_overlap 1128454 TTTTAATTCAATTTA GCCTTCC GTT GGGAGGC TTTTTATTTTGTGAG TERM 1114 1129083 - 1129095 + G 73 -7.7 -4.10566 | overlap 1129077 AGGAGTTTAGGTGGG GCATC TTT GATGC TTTCTCTGGTCCTGT TERM 1115 1129177 - 1129207 + G 75 -6.2 -4.64766 | gap 1 GCCTGCAGCACGCCG CTCGCGTCATGGG GTGTGG TCCATGGCG-GAG TTTTTGGCATCTGAG Ssed_0946 1128657 - 1130288 + | binding-protein-dependent transport systems inner membrane component Ssed_0947 1130382 - 1131410 + | ABC transporter related Ssed_0948 1131459 - 1133150 + | gamma-glutamyltransferase Ssed_0949 1133279 - 1134217 + | Dyp-type peroxidase family protein TERM 1116 1134265 - 1134248 - T 100 -9.9 -5.46276 | opp_overlap 1134248 AACAGACACAAAAAA CGCACTA TTTT TAGTGCG TTTTTTTATTCCTAA TERM 1117 1134248 - 1134265 + T 100 -9.9 -5.84381 | opp_overlap 1134248 AACAGACACAAAAAA CGCACTA TTTT TAGTGCG TTTTTTTATTCCTAA Ssed_0950 1134782 - 1134306 - | cupin 2 domain-containing protein TERM 1118 1134914 - 1134898 - R 100 -10.1 -5.46706 | opp_overlap 1134898 AGGGGAAAACAAAAA GAGACGC GAA GCGCCTC TTTGAATGTGAATAG TERM 1119 1134898 - 1134914 + r 70 -7.9 -3.71873 | opp_overlap 1134898 AGGGGAAAACAAAAA GAGACGC GAA GCGCCTC TTTGAATGTGAATAG Ssed_0951 1135478 - 1135008 - | arginine repressor Ssed_0952 1135847 - 1136782 + | malate dehydrogenase TERM 1120 1136823 - 1136852 + T 90 -12.3 -3.68302 | opp_overlap 1136830, overlap 1136830 GTAATAGGTCCAAGC AAAAAAAGGAGCC TCAG GGCTCCTTTTTTA TTGTTCGAATGTTAG TERM 1121 1136845 - 1136830 - T 100 -10.4 -5.63103 | opp_overlap 1136823 1136830 GTCCAAGCAAAAAAA GGAGCC TCAG GGCTCC TTTTTTATTGTTCGA TERM 1122 1136830 - 1136845 + T 100 -10.4 -5.64873 | opp_overlap 1136830, overlap 1136823 GTCCAAGCAAAAAAA GGAGCC TCAG GGCTCC TTTTTTATTGTTCGA Ssed_0953 1137847 - 1136876 - | trans-hexaprenyltranstransferase Ssed_0954 1138126 - 1138437 + | 50S ribosomal protein L21 Ssed_0955 1138453 - 1138707 + | 50S ribosomal protein L27 TERM 1123 1138735 - 1138761 + F 100 -17.4 -4.2693 | opp_overlap 1138739, overlap 1138739 GCTAAGATTGCTTAT TAAAGCCCCGCC TTT GGTGGGGCTTTA TTGTTTTAATGGGTT TERM 1124 1138757 - 1138739 - f 88 -11.6 -3.73402 | opp_overlap 1138735 1138739 AGATTGCTTATTAAA GCCCCGCC TTT GGTGGGGC TTTATTGTTTTAATG TERM 1125 1138739 - 1138757 + F 100 -13.8 -4.70107 | opp_overlap 1138739, overlap 1138735 AGATTGCTTATTAAA GCCCCGCC TTT GGTGGGGC TTTATTGTTTTAATG TERM 1126 1139290 - 1139273 - g 80 -6.9 -4.67943 | CTCCAAGACAGAAAA CACTGGG AACT CCCGGTG AGGTTCGAAGCCTTA Ssed_0956 1138849 - 1140009 + | GTPase ObgE TERM 1127 1140403 - 1140391 - g 78 -9.1 -3.99898 | CAACGAAGTCAGAAA GCGTG TCT CACGC ATAGAGCCCAGAACT TERM 1128 1140587 - 1140597 + G 73 -8.2 -3.90856 | TTGTTGCTTAACTTT GCCG TCA CGGC TTTCGTTACCACCTT Ssed_0957 1140080 - 1140841 + | hypothetical protein Ssed_0958 1140841 - 1141308 + | hypothetical protein TERM 1129 1141603 - 1141626 + G 70 -9.7 -3.22774 | overlap 1141587 GGGTTACTTGTGTTA CCTCTTTTG AAGCTG CAAAAGAGG TTGCTGGTGACTGTG Ssed_0959 1141371 - 1141853 + | dihydrofolate reductase Ssed_0960 1141954 - 1142340 + | hypothetical protein TERM 1130 1142347 - 1142397 + T 70 -5.7 -4.36914 | opp_overlap 1142364, overlap 1142364 GGCAGTTAGGCTTCA GGGT-TTCAATAAAAAAAGCCGGAC TGA GTCCGGCTTTTTT-ATGGAATAAAC TTTTCTGGAACAAAG TERM 1131 1142380 - 1142364 - T 100 -13.7 -5.7946 | opp_overlap 1142347 1142364 GTTTCAATAAAAAAA GCCGGAC TGA GTCCGGC TTTTTTATGGAATAA TERM 1132 1142364 - 1142380 + T 100 -13.7 -5.26316 | opp_overlap 1142364, overlap 1142347 GTTTCAATAAAAAAA GCCGGAC TGA GTCCGGC TTTTTTATGGAATAA Ssed_0961 1144444 - 1142417 - | methyl-accepting chemotaxis sensory transducer Ssed_0962 1145405 - 1144581 - | diadenosine tetraphosphatase Ssed_0963 1145820 - 1145440 - | ApaG TERM 1133 1145860 - 1145844 - R 100 -13.7 -4.42806 | opp_overlap 1145840 TTATGGCGAAAGAAA GGAGGGC TTA GCCCTCC TGAAATTTAAGATTG Ssed_0964 1146718 - 1145915 - | dimethyladenosine transferase Ssed_0965 1147718 - 1146732 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1134 1146949 - 1146963 + g 71 -2.8 -4.83615 | overlap 1146952 GCTAAGATAACATCG GCATCT TCC AGATAC TTTTTCTGGAAAATA TERM 1135 1147336 - 1147308 - G 78 -5.4 -5.00616 | gap 2, opp_overlap 1147308 1147309, overlap 1147309 1147310 CTGGTTGGCAAAAAA CTCGGTATGTCCGC TAA ACGGA-ATACCG-G ATTGGTTAATGATAC TERM 1136 1147652 - 1147616 - G 100 -28.3 -3.54741 | opp_overlap 1147619, overlap 1147619 CAGGATCGGCGCAAA CAACTAGCTCAGCAGGC CAA GCCTGCTGAGCTAGTTG GATAACTAAATCTGG TERM 1137 1147649 - 1147619 - G 100 -24.2 -3.9122 | opp_overlap 1147619, overlap 1147616 GATCGGCGCAAACAA CTAGCTCAGCAGGC CAA GCCTGCTGAGCTAG TTGGATAACTAAATC TERM 1138 1147619 - 1147649 + g 100 -24.2 -3.08133 | opp_overlap 1147616 1147619 GATCGGCGCAAACAA CTAGCTCAGCAGGC CAA GCCTGCTGAGCTAG TTGGATAACTAAATC Ssed_0966 1149028 - 1147724 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1139 1149017 - 1149007 - G 74 -2.6 -5.17786 | TAAGAAAAGCAAAAA TAAA ATG TTTA CAGGGTTTCATCAAC Ssed_0967 1151474 - 1149150 - | organic solvent tolerance protein TERM 1140 1151589 - 1151607 + H 83 -9 -4.13767 | TTAGCTGTTTCCATT TTGCTTTA TAA TAAAGCAA TTTTCCCATAAGAGC Ssed_0968 1151629 - 1152633 + | aminoglycoside phosphotransferase Ssed_0969 1152630 - 1153319 + | nucleotidyl transferase Ssed_0970 1153396 - 1154175 + | Dna-J like membrane chaperone protein Ssed_0971 1154315 - 1154944 + | hypothetical protein Ssed_0972 1154987 - 1155958 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 1141 1156000 - 1155960 - T 72 -10.5 -2.63432 | overlap 1155959 1155987 ATAGAGTGAATTAAT TGCTCCCGGACGACTTT GTCTTGG AAAGTCACCCGGGAACC GTATAACTACTGAAA Ssed_0973 1157200 - 1156025 - | phosphoribosylglycinamide formyltransferase 2 TERM 1142 1157161 - 1157177 + g 93 -13.7 -3.73816 | opp_overlap 1157161 1157158 CGCAGCCGAGAAGCA TGGCGCG AAG CGCGCCA TTTGAATGTGGTGTT TERM 1143 1157177 - 1157161 - G 85 -13.7 -2.83822 | opp_overlap 1157161, overlap 1157158 CGCAGCCGAGAAGCA TGGCGCG AAG CGCGCCA TTTGAATGTGGTGTT TERM 1144 1157410 - 1157394 - H 70 -2.9 -5.08824 | opp_overlap 1157400, overlap 1157374 1157372 TTTTGACTGAAAAAA CACTGGC ATT GCTAATG GTTTGTTGGGAGAAT Ssed_0974 1157515 - 1157922 + | hypothetical protein Ssed_0975 1157924 - 1159060 + | secretion protein HlyD family protein TERM 1145 1159133 - 1159108 - T 90 -10.5 -4.34263 | opp_overlap 1159108 TTTCAATAATATAAA GGGCTGAAGAT GATG ATCTTTAGCCC TTTTTTCAGCTGTCT TERM 1146 1159108 - 1159133 + T 100 -12.7 -5.08169 | opp_overlap 1159108 TTTCAATAATATAAA GGGCTGAAGAT GATG ATCTTTAGCCC TTTTTTCAGCTGTCT Ssed_0976 1159975 - 1159166 - | Sel1 domain-containing protein TERM 1147 1160221 - 1160248 + H 100 -7.1 -5.626 | opp_overlap 1160222 1160226, overlap 1160222 AGCTAGGAGTTGAAA ATAAAGGGACA TTAGAT TGTCCCTTTAC TTTTTTTATCAGGTA TERM 1148 1160247 - 1160222 - H 90 -10.6 -4.15565 | opp_overlap 1160221 1160222, overlap 1160226 GCTAGGAGTTGAAAA TAAAGGGACA TTAGAT TGTCCCTTTA CTTTTTTTATCAGGT TERM 1149 1160222 - 1160247 + H 88 -10.6 -3.96475 | opp_overlap 1160222 1160226, overlap 1160221 GCTAGGAGTTGAAAA TAAAGGGACA TTAGAT TGTCCCTTTA CTTTTTTTATCAGGT TERM 1150 1160243 - 1160226 - H 81 -7 -4.67048 | opp_overlap 1160222 1160221, overlap 1160222 GGAGTTGAAAATAAA GGGACA TTAGAT TGTCCC TTTACTTTTTTTATC TERM 1151 1161769 - 1161748 - g 81 -9.5 -4.05033 | gap 1, overlap 1161749 GTGATGCGAGAGAAA CTCCAGTCTC TCA GAGACTGG-G CTTCGGGTCGCACGG Ssed_0977 1160332 - 1161801 + | ATPase central domain-containing protein Ssed_0978 1162497 - 1161907 - | hypothetical protein Ssed_0979 1162552 - 1162917 + | Fe-S protein-like protein Ssed_0980 1164295 - 1163003 - | integral membrane sensor signal transduction histidine kinase TERM 1152 1164175 - 1164195 + g 90 -14.1 -3.09135 | opp_overlap 1164168 1164175, overlap 1164168 GCGCCAAAGCGATAA GTGGTGCAT CTA ATGCACCAC TCTCTTCGACATTAT TERM 1153 1164195 - 1164175 - G 93 -14.1 -3.47349 | opp_overlap 1164175 1164168, overlap 1164168 GCGCCAAAGCGATAA GTGGTGCAT CTA ATGCACCAC TCTCTTCGACATTAT Ssed_0981 1165065 - 1164352 - | two component transcriptional regulator Ssed_0982 1165484 - 1165065 - | hypothetical protein Ssed_0983 1166374 - 1165490 - | MltA-interacting MipA family protein Ssed_0984 1166673 - 1167848 + | acyl-CoA dehydrogenase domain-containing protein TERM 1154 1167849 - 1167868 + T 83 -9.3 -4.06993 | overlap 1167858 CAAGCATTTTGTTGA GCCAAGG GTGAAG CCTTGGC TTCTTTCCTCTGTGA Ssed_0985 1169242 - 1168034 - | response regulator receiver protein TERM 1155 1168563 - 1168573 + gT 75 -5.4 -4.79373 | TGCTGTATCATGCTA TCCA GGC TGGA TTTTATGTTATCTTC TERM 1156 1168732 - 1168755 + gT 91 -9.6 -4.61868 | TGGCTATAGAGCCTA GCAGTGATTG TTTA CATTCACTGC TTTTATCTATGAGTG Ssed_0986 1169579 - 1169211 - | Hpt protein Ssed_0987 1172388 - 1169572 - | histidine kinase TERM 1157 1172509 - 1172537 + r 72 -10.4 -2.7224 | overlap 1172506 TTCAGCTTGATGCTG GCTTGATTGCGA AAATA TCGCAGTTAAGC TGATCTATGATGTGC Ssed_0988 1173385 - 1172495 - | UspA domain-containing protein TERM 1158 1173550 - 1173571 + r 72 -10.1 -2.6072 | opp_overlap 1173548, overlap 1173548 TTTTACATAATATTC GGGCCTGTC AATA GACAAGCCC TGCGTTAATTCGATG Ssed_0989 1174103 - 1173633 - | hypothetical protein Ssed_0990 1174724 - 1174350 - | hypothetical protein Ssed_0991 1175131 - 1175370 + | hypothetical protein Ssed_0992 1175980 - 1175561 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1159 1175845 - 1175857 + g 71 -9.1 -3.60098 | opp_overlap 1175841 1175845 CGTCACCGAAATGGA CCCAG TCT CTGGG TTTACCGTGCCAGCT Ssed_0993 1176407 - 1176021 - | glyoxalase/dioxygenase superfamily protein TERM 1160 1176286 - 1176274 - G 75 -3.3 -5.1104 | overlap 1176275 AAAGAGAGAGAAAAA CTGGC ATC GCCAT CCAGGCAGTGAAACC Ssed_0994 1177085 - 1176429 - | NADPH-dependent FMN reductase TERM 1161 1176848 - 1176828 - G 72 -11.1 -2.57881 | overlap 1176827 GAAGTTTTTCAGAAG TGGAGAGGC CAT GCCCCCCCA TTCCGGAGTGATAAG TERM 1162 1177397 - 1177385 - gH 91 -6.9 -5.31275 | TTCGAGGATAAAAAA GCCCC CCG GGGAC GTCCTACCCGGTACT Ssed_0995 1177229 - 1177849 + | hypothetical protein Ssed_0996 1177821 - 1178564 + | pseudouridine synthase Ssed_0997 1178674 - 1179639 + | LysR family transcriptional regulator TERM 1163 1179923 - 1179898 - g 72 -11.1 -2.63089 | opp_overlap 1179903, overlap 1179897 1179895 1179922 GATGATGGTAAAGAT GGTGCTCCGGG AGAT CCTGGAACACC GGGGACTCCGGGAAC TERM 1164 1180086 - 1180054 - g 71 -8.5 -3.6502 | opp_overlap 1180050 GATTTCTCACTCAAA TTCACCGTTACCGGT AAA AACAGTAAAGGTGAA GCTGTACCTTTTGTT TERM 1165 1180473 - 1180486 + G 74 -9.5 -3.53224 | TTTTAACCCATCCAC CGGCG AGCT CGCCG TTTCAACAAAGGATA Ssed_0998 1179811 - 1182111 + | decaheme cytochrome c TERM 1166 1182134 - 1182162 + F 100 -11.2 -5.47218 | gap 1 TATAATATTTCACCC TCTGTGGGAT-CA TCCC TGCATCCCACAGA TTTTTTTAAGTGGCA TERM 1167 1182204 - 1182222 + F 100 -12.4 -5.27923 | GATCTTTGTTGATTT TGGGGCCT TTA GGGCCCCA TTTTTTATCAACTTG Ssed_0999 1182926 - 1183537 + | hypothetical protein TERM 1168 1183598 - 1183578 - T 100 -11.9 -5.83822 | opp_overlap 1183578 TAGATTCAAAAAAAA GGCTGACAC TTG ATGTCAGCC TTTTTTGTTTTAACT TERM 1169 1183578 - 1183598 + T 100 -11.2 -5.80951 | opp_overlap 1183578 TAGATTCAAAAAAAA GGCTGACA CTTGA TGTCAGCC TTTTTTGTTTTAACT Ssed_1000 1185171 - 1183639 - | major facilitator transporter Ssed_1001 1185661 - 1186221 + | hypothetical protein TERM 1170 1186286 - 1186304 + F 89 -10.4 -4.26076 | AGGTTTTGCTGGCAA GTGTAAAC AAC GTTTACAC TTTTAATAAACCTAA TERM 1171 1186387 - 1186409 + F 80 -2 -5.69473 | opp_overlap 1186387 ATCGAGGTTAAACAG GGATCTTA TGGAAGT TCAGATCC TTTTTTTATGGTGTC Ssed_1002 1186394 - 1189696 + | methyl-accepting chemotaxis protein-like protein Ssed_1003 1190451 - 1189876 - | hypothetical protein TERM 1172 1190209 - 1190194 - G 77 -10.4 -3.58343 | CCGATTATCTTTAAA GGCGCT GCAA AGCGCC AGTTCGGGAATGCTC Ssed_1004 1191241 - 1190429 - | hypothetical protein TERM 1173 1191230 - 1191205 - G 71 -4.7 -4.52589 | gap 1 CTGCCGGATAGAAAA GATCGGCCACGG CGG CC-TGGCGAATC GAGCTCAACATTTGA Ssed_1005 1191313 - 1192425 + | radical SAM domain-containing protein TERM 1174 1192470 - 1192483 + F 73 -6.7 -4.19577 | TTTGTTTTTTTAGGT GTGAC CCTC GTCAC TTATTTTAACCCTTC TERM 1175 1192603 - 1192591 - f 70 -2.7 -5.15167 | TAGTACCAACAAAAA TCAAA GCG CTTGA ATATCCAAACAGAGA Ssed_1006 1192645 - 1194366 + | methyl-accepting chemotaxis sensory transducer TERM 1176 1194388 - 1194430 + F 100 -15.8 -3.14931 | opp_overlap 1194388 1194399, overlap 1194399 TTGAGCTACAATTTA GAACGAAAGAAGGGCTGTCG AGA TGACAGCCCTTTTTTTATTC TTGCTACGGGCTACA TERM 1177 1194430 - 1194388 - f 90 -12.9 -2.6063 | opp_overlap 1194388 1194399, overlap 1194399 TTGAGCTACAATTTA GAACGAAAGAAGGGCTGTC GAGAT GACAGCCCTTTTTTTATTC TTGCTACGGGCTACA TERM 1178 1194399 - 1194419 + F 100 -13.3 -5.95946 | opp_overlap 1194388 1194399, overlap 1194388 TTTAGAACGAAAGAA GGGCTGTCG AGA TGACAGCCC TTTTTTTATTCTTGC TERM 1179 1194419 - 1194399 - f 93 -12.6 -4.12296 | opp_overlap 1194399 1194388, overlap 1194388 TTTAGAACGAAAGAA GGGCTGTC GAGAT GACAGCCC TTTTTTTATTCTTGC Ssed_1007 1194734 - 1196455 + | methyl-accepting chemotaxis sensory transducer TERM 1180 1196481 - 1196511 + T 95 -13.4 -3.71284 | opp_overlap 1196486, overlap 1196486 TGAAATTGAGAATGC AAAAAGGGCTGTCG GGA TGACAGCCCTTTTC TTGTATTGGTGCGAG TERM 1181 1196486 - 1196506 + T 100 -13.3 -4.91285 | opp_overlap 1196486, overlap 1196481 TTGAGAATGCAAAAA GGGCTGTCG GGA TGACAGCCC TTTTCTTGTATTGGT TERM 1182 1196506 - 1196486 - T 100 -12.6 -4.78149 | opp_overlap 1196486 1196481 TTGAGAATGCAAAAA GGGCTGTC GGGAT GACAGCCC TTTTCTTGTATTGGT TERM 1183 1196794 - 1196811 + T 70 -8.3 -3.33473 | opp_overlap 1196794, overlap 1196792 1196790 ACGGGCAATAAAAAA GGCAGCC TGAT GGCCGCC TCTCTTTGCTCTGTC TERM 1184 1196811 - 1196794 - T 100 -10.5 -5.45652 | opp_overlap 1196794 1196792 1196790 ACGGGCAATAAAAAA GGCAGCC TGAT GGCCGCC TCTCTTTGCTCTGTC Ssed_1008 1199781 - 1196866 - | valyl-tRNA synthetase Ssed_1009 1200267 - 1199797 - | DNA polymerase III chi subunit, HolC Ssed_1010 1201754 - 1200612 - | ABC-type sugar transport system, periplasmic component TERM 1185 1202539 - 1202513 - H 76 -4.4 -5.0133 | opp_overlap 1202513 GAGTCGGCCAAAAAA GTGAGATAAACC TAT GGTTTTCCTGAC GTGTTCTGCCCAGTA Ssed_1011 1203137 - 1204327 + | ribosome-associated GTPase Ssed_1012 1204825 - 1206705 + | hypothetical protein TERM 1186 1206746 - 1206769 + F 84 -8.1 -4.75372 | TTACGCATAGATGTG GCCGTGATC CTTGGT GACCACGGC TTTTTACTACATGCT Ssed_1013 1206827 - 1207279 + | hypothetical protein TERM 1187 1207430 - 1207451 + T 100 -14.5 -5.29385 | opp_overlap 1207430 TAGGCAAACAAAAAA GGTGAAGCG TTTC CGCTTCACC TTTTTTAATTGAGTT TERM 1188 1207451 - 1207430 - T 100 -14.5 -5.65927 | opp_overlap 1207430 TAGGCAAACAAAAAA GGTGAAGCG TTTC CGCTTCACC TTTTTTAATTGAGTT Ssed_1014 1209036 - 1207528 - | leucyl aminopeptidase TERM 1189 1209201 - 1209189 - H 74 -6.3 -4.43571 | overlap 1209180 ACAAAACTACCAAAA GTAGA CAG TCTAC ATGAAAGTTTGAGTG TERM 1190 1209718 - 1209728 + G 71 -8.2 -3.62695 | overlap 1209716 CCAGACCAGCCCTAA CGGC AGA GCCG TATTGTTTGTCGAGC Ssed_1015 1209257 - 1210369 + | permease YjgP/YjgQ family protein Ssed_1016 1210366 - 1211424 + | permease YjgP/YjgQ family protein Ssed_1017 1212091 - 1211567 - | RDD domain-containing protein Ssed_1018 1212436 - 1212179 - | hypothetical protein Ssed_1019 1213041 - 1212556 - | GCN5-related N-acetyltransferase Ssed_1020 1214638 - 1213148 - | carboxypeptidase Taq TERM 1191 1214791 - 1214759 - R 79 -9.2 -3.87815 | opp_overlap 1214769, overlap 1214761 1214763 1214769 GCGGATCGGTATAAA CACATAAAAAGCGC ACTGG GCGCTTTTTAAGGG TGAGACTGATTTCAA TERM 1192 1214789 - 1214761 - R 79 -10.4 -3.52906 | opp_overlap 1214769, overlap 1214759 1214763 1214769 GGATCGGTATAAACA CATAAAAAGCGC ACTGG GCGCTTTTTAAG GGTGAGACTGATTTC TERM 1193 1214787 - 1214763 - R 85 -11.6 -3.33798 | opp_overlap 1214769, overlap 1214761 1214759 1214769 ATCGGTATAAACACA TAAAAAGCGC ACTGG GCGCTTTTTA AGGGTGAGACTGATT TERM 1194 1214769 - 1214781 + r 77 -6.2 -4.59773 | opp_overlap 1214763 1214761 1214759 1214769 ATAAACACATAAAAA GCGC ACTGG GCGC TTTTTAAGGGTGAGA TERM 1195 1214781 - 1214769 - R 83 -6.2 -5.1634 | opp_overlap 1214769, overlap 1214763 1214761 1214759 ATAAACACATAAAAA GCGC ACTGG GCGC TTTTTAAGGGTGAGA Ssed_1021 1215445 - 1214819 - | hypothetical protein TERM 1196 1215491 - 1215475 - R 93 -8 -5.45652 | opp_overlap 1215475 ATCGTTAAGAAAAAA TCACCG TCAAG CGGTGA TTTTCAGATAAAAAG TERM 1197 1215475 - 1215491 + r 79 -8.7 -4.13767 | opp_overlap 1215475 ATCGTTAAGAAAAAA TCACCGT CAA GCGGTGA TTTTCAGATAAAAAG Ssed_1022 1216834 - 1215527 - | DEAD/DEAH box helicase domain-containing protein TERM 1198 1216397 - 1216385 - G 73 -7.7 -4.06384 | GTCTAATACCATAAA GTCGA CAT TCGAC AGATTTAAGTTACAC Ssed_1023 1217214 - 1218413 + | response regulator receiver modulated diguanylate phosphodiesterase TERM 1199 1218448 - 1218419 - T 70 -7.9 -3.66784 | gap 1 GCAGGTGTAATAGAA TCCCGGATATCTCG TTC CACGAT-TCCGGGA TGACTACTATTAGTA Ssed_1024 1220294 - 1218507 - | peptidase M24 TERM 1200 1219464 - 1219501 + g 71 -8.5 -3.62418 | gap 1 GGCAGTCAGTTGTGA CCAGGC-GTTAGCCGA ATTAGGA TCGGCCAACAGTCTGG TTTCCGCTAACTTAT Ssed_1025 1220589 - 1221785 + | major facilitator transporter Ssed_1026 1221879 - 1222658 + | ROK family protein TERM 1201 1223205 - 1223230 + G 78 -11.9 -2.95884 | GTGGTTCAGATCCTT CTTCCTGCTGG GGGG CTGGCAGGAAG TCTCTGGATTGGTGA Ssed_1027 1223070 - 1224383 + | phosphoesterase, PA-phosphatase related TERM 1202 1224426 - 1224408 - f 72 -10.2 -2.5294 | opp_overlap 1224409, overlap 1224407 1224405 TATCTTCCATAAGAT GCCGGCCA CAT TGGCCGGT TTTTTTATGCCTGTT TERM 1203 1224409 - 1224425 + F 100 -13.7 -5.65177 | opp_overlap 1224408 1224407 1224405 ATCTTCCATAAGATG CCGGCCA CAT TGGCCGG TTTTTTTATGCCTGT Ssed_1028 1224666 - 1225883 + | peptidase M24 TERM 1204 1225918 - 1225951 + T 100 -17.5 -5.44119 | opp_overlap 1225922, overlap 1225922 AGTCGGTATAAATGA AAAAGCCCCGGGCAG TAAG CTGTCCGGGGCTTTA TTTTTTTGGGGTAAG TERM 1205 1225922 - 1225947 + T 100 -18.3 -5.20328 | opp_overlap 1225922, overlap 1225918 GGTATAAATGAAAAA GCCCCGGGCAG TAAG CTGTCCGGGGC TTTATTTTTTTGGGG TERM 1206 1225947 - 1225922 - T 100 -16.1 -5.04601 | opp_overlap 1225922 1225918 GGTATAAATGAAAAA GCCCCGGGCAG TAAG CTGTCCGGGGC TTTATTTTTTTGGGG Ssed_1029 1226438 - 1225968 - | peptidylprolyl isomerase, FKBP-type Ssed_1030 1226970 - 1226635 - | cold shock DNA-binding domain-containing protein Ssed_1031 1228426 - 1227131 - | Signal transduction histidine kinase-like protein Ssed_1032 1229121 - 1228423 - | response regulator Ssed_1033 1229560 - 1229186 - | hypothetical protein Ssed_1034 1232217 - 1229557 - | PPE repeat-containing protein Ssed_1035 1232858 - 1232376 - | hypothetical protein TERM 1207 1232897 - 1232910 + H 73 -8.1 -3.79519 | AGCCTGTTGAATCTT GCCAG AGTA CTGGC TTTGCTCATCGAGTT Ssed_1036 1233026 - 1233283 + | MarR family transcriptional regulator Ssed_1037 1233761 - 1233285 - | hypothetical protein TERM 1208 1234483 - 1234502 + G 75 -5.6 -4.81814 | ATCTGTGCCATGTTG CTACCGGG GATC TCCGGGAG TTTTATTCTACTGCT TERM 1209 1234807 - 1234846 + G 71 -4.9 -4.54449 | gap 1, opp_overlap 1234808, overlap 1234808 CAGTTTGAACAGTTA ACGGGCCAGCCTGCCCAT ATTGC ATGGGCCG-TTGGCGCGC TTTTGTGTGGCATCT Ssed_1038 1233988 - 1234920 + | hypothetical protein TERM 1210 1235145 - 1235170 + T 84 -10.5 -3.93216 | opp_overlap 1235154 AGATATACGCTATTC GTGACTAGAGC CTAG GATCTAGTCAC TTATTATCATTTAAC Ssed_1039 1235525 - 1235181 - | hypothetical protein Ssed_1040 1235745 - 1235927 + | hypothetical protein TERM 1211 1235970 - 1235941 - T 84 -12.3 -3.05463 | opp_overlap 1235949, overlap 1235949 AGTGCTGTGACTCAA TAAAAAAACCGCC GGAT GGCGGTTTTTTTT GGTGTTAATAATGGT TERM 1212 1235962 - 1235949 - T 100 -9.5 -5.8187 | opp_overlap 1235949, overlap 1235941 GACTCAATAAAAAAA CCGCC GGAT GGCGG TTTTTTTTGGTGTTA TERM 1213 1235949 - 1235962 + T 100 -9.5 -5.94597 | opp_overlap 1235949 1235941 GACTCAATAAAAAAA CCGCC GGAT GGCGG TTTTTTTTGGTGTTA Ssed_1041 1236721 - 1236002 - | hypothetical protein Ssed_1042 1237242 - 1236859 - | protein of unknown function DUF861, cupin_3 TERM 1214 1237312 - 1237283 - R 78 -10.8 -3.04461 | opp_overlap 1237288, overlap 1237288 CATTTAGCGTTAACA GCAAAGGTGCAG GCAAGG CTGCACCTTTGT GATGATTACTTCATC TERM 1215 1237307 - 1237288 - R 79 -9.3 -3.92592 | opp_overlap 1237288, overlap 1237283 AGCGTTAACAGCAAA GGTGCAG GCAAGG CTGCACC TTTGTGATGATTACT TERM 1216 1237288 - 1237307 + r 83 -9.3 -4.02424 | opp_overlap 1237288 1237283 AGCGTTAACAGCAAA GGTGCAG GCAAGG CTGCACC TTTGTGATGATTACT Ssed_1043 1238808 - 1237318 - | methylmalonate-semialdehyde dehydrogenase TERM 1217 1238857 - 1238885 + r 83 -11.9 -3.11951 | overlap 1238855 1238851 TGGTAATTGGGTGTC TATTCCAGTCG CTCAGCA CGACTGGAATA TCTGTCTGTTGATCG Ssed_1044 1240256 - 1238919 - | beta alanine--pyruvate transaminase TERM 1218 1241474 - 1241461 - g 91 -9.5 -4.62471 | opp_overlap 1241461 1241462, overlap 1241462 1241463 CCGAATCTGCAAAAA GCGGC CGAA GCCGC CGCTTCTGCCATTGC Ssed_1045 1240591 - 1242102 + | aldehyde dehydrogenase (NAD(+)) TERM 1219 1242154 - 1242107 - T 100 -18.6 -3.71487 | opp_overlap 1242111 1242121, overlap 1242108 CACTAGATTGAAGAA TCGAGGTTCGAGGTCCTAGTAC CTAG GTTCTAGAACCTCAAACCTCGC TATCAGACTACTTAT TERM 1220 1242153 - 1242108 - T 100 -22.1 -2.8241 | opp_overlap 1242111 1242121, overlap 1242107 ACTAGATTGAAGAAT CGAGGTTCGAGGTCCTAGTAC CTAG GTTCTAGAACCTCAAACCTCG CTATCAGACTACTTA Ssed_1046 1243388 - 1242162 - | sodium:dicarboxylate symporter Ssed_1047 1244459 - 1243683 - | hypothetical protein TERM 1221 1244583 - 1244599 + r 84 -8 -4.71463 | opp_overlap 1244583 GGATTAAAGAGAGAA GCACTC AATCA GAGTGC TTTCTTGTTTTGATT TERM 1222 1244599 - 1244583 - R 70 -8 -3.78419 | opp_overlap 1244583 GGATTAAAGAGAGAA GCACTC AATCA GAGTGC TTTCTTGTTTTGATT Ssed_1048 1245536 - 1244631 - | ribokinase TERM 1223 1245478 - 1245457 - G 79 -10.1 -3.72576 | opp_overlap 1245458, overlap 1245458 TCCTTGCTCATCAAA GTCTGCCCG GGGG CGGGCAGAT ATTCAAATGACATCA TERM 1224 1245477 - 1245458 - G 85 -13.6 -2.83403 | opp_overlap 1245458, overlap 1245457 CCTTGCTCATCAAAG TCTGCCCG GGGG CGGGCAGA TATTCAAATGACATC TERM 1225 1245458 - 1245477 + g 86 -13.6 -3.06162 | opp_overlap 1245458 1245457 CCTTGCTCATCAAAG TCTGCCCG GGGG CGGGCAGA TATTCAAATGACATC Ssed_1049 1246551 - 1245613 - | ribonucleoside hydrolase 1 Ssed_1050 1246820 - 1247377 + | putative adenylate cyclase CyaB TERM 1226 1247913 - 1247876 - f 90 -12.8 -3.74519 | overlap 1247898 AATAGGTTTATTAAA TGTGCATGCGCGTTTA GCCAAA TATACGCGCATGCGCA CAATACAAATGTTAG TERM 1227 1248291 - 1248258 - g 81 -9.7 -4.06502 | opp_overlap 1248261, overlap 1248262 1248265 CATCGGTAAACTAAA GAAATTATCAGGAGA TAGC TCTCCTGAGAAATTC CTGACAAAAAATGAT TERM 1228 1248287 - 1248262 - g 90 -9.1 -4.62772 | opp_overlap 1248261, overlap 1248258 1248265 GGTAAACTAAAGAAA TTATCAGGAGA TAGC TCTCCTGAGAA ATTCCTGACAAAAAA TERM 1229 1248284 - 1248265 - g 76 -10.8 -3.23149 | opp_overlap 1248261, overlap 1248262 1248258 AAACTAAAGAAATTA TCAGGAGA TAGC TCTCCTGA GAAATTCCTGACAAA Ssed_1051 1247932 - 1248639 + | hypothetical protein Ssed_1052 1248771 - 1249175 + | glutathione-dependent formaldehyde-activating, GFA TERM 1230 1249213 - 1249183 - f 76 -7.6 -4.27512 | gap 1, opp_overlap 1249188 1249193, overlap 1249180 CTTCATAACAAATAA GGAT-AGGCCGCG CGCAGC CGCGTCCTTATCC CGAGTGTTGAACAAG Ssed_1053 1249406 - 1249828 + | glutathione-dependent formaldehyde-activating, GFA Ssed_1054 1250507 - 1250902 + | hypothetical protein Ssed_1055 1251028 - 1251264 + | hypothetical protein Ssed_1056 1251364 - 1251711 + | hypothetical protein TERM 1231 1251887 - 1251903 + T 71 -9.5 -2.87132 | CGGTTTCAGGGCGAG GTTTCAC ATA GTGAAAC TCTCTGAGCGAGAGA Ssed_1057 1253659 - 1252352 - | FAD dependent oxidoreductase TERM 1232 1254030 - 1254042 + G 100 -4.8 -5.71712 | ATCGGGGCTGCCTAT GTCC CTGGT GGAC TTTTTTTCTATGGAA Ssed_1058 1253857 - 1254411 + | XRE family transcriptional regulator TERM 1233 1254577 - 1254599 + F 76 -7.6 -4.24342 | opp_overlap 1254567 1254579, overlap 1254574 GTAAAGCTTCAACCA GAGTCCGGCT TTA AGCCGGAAGC TTTCTTAATCCAAAA TERM 1234 1255310 - 1255328 + G 70 -9.6 -3.17051 | overlap 1255314 CTTTTAATATAGTGG GCGAGAAG TAC CTTCTTGC TATTGCTGATGCGAC Ssed_1059 1255231 - 1255992 + | peptidase C26 TERM 1235 1256386 - 1256376 - g 71 -6.8 -4.23674 | opp_overlap 1256378, overlap 1256377 CTCTATGAAGATAAA GGCT GGA AGCC AGTCGTTGCGCCTGA Ssed_1060 1255995 - 1257344 + | glutamate--putrescine ligase TERM 1236 1257350 - 1257378 + F 100 -16.1 -3.06261 | CACCGTCTGATTTTC TGAGGGAGCATGG TTG TCGTGCTCCCTCA TATTGAAGGTTAAAG TERM 1237 1257996 - 1257985 - g 70 -2.2 -4.98255 | GCCTAACCATAAAAA CCTG AATT CAGA TCTGATGACTCAGCT Ssed_1061 1257662 - 1258762 + | extracellular solute-binding protein TERM 1238 1258774 - 1258792 + F 86 -10.3 -3.98804 | opp_overlap 1258763 CTAACACTCCTCGAG GGGCAAG TCACT CTTGCCC TTGTTTCACCTTTCA TERM 1239 1258827 - 1258847 + F 74 -6.1 -4.37658 | GTTTAAATTGCCGTA GGTGCCT GTAGATG AGGCGCC TTTTGTGGAGAAGTT TERM 1240 1259089 - 1259077 - g 78 -9.1 -4.13767 | GGCTGGATTTGAAAA GCCCT CAG AGGGC CGCATTTATCTGGAC Ssed_1062 1258838 - 1260001 + | spermidine/putrescine ABC transporter ATPase subunit TERM 1241 1260369 - 1260355 - g 73 -8.6 -3.90922 | opp_overlap 1260354 AGGGCGCCGAAACAA CAGCAA ACC TTGCTG ATCCTCTTAGTGATG Ssed_1063 1260013 - 1260918 + | binding-protein-dependent transport systems inner membrane component Ssed_1064 1260915 - 1261742 + | ornithine carbamoyltransferase Ssed_1065 1261914 - 1263200 + | FAD dependent oxidoreductase TERM 1242 1263227 - 1263253 + F 95 -13.8 -3.73068 | opp_overlap 1263227 CTCTGTCATCATTAA TCTGCCTCGAAT CCC AGTCGAGGCAGA TTCTTCCGTTAAAAA TERM 1243 1263253 - 1263227 - f 93 -13.8 -3.21099 | opp_overlap 1263227 CTCTGTCATCATTAA TCTGCCTCGAAT CCC AGTCGAGGCAGA TTCTTCCGTTAAAAA Ssed_1066 1263449 - 1265566 + | methyl-accepting chemotaxis sensory transducer TERM 1244 1266868 - 1266882 + G 71 -9.2 -3.53091 | CCTACGGTCTTTTTT GGTGGC GAT GCCGCC TTTGGCCCAAAAAAT TERM 1245 1267311 - 1267351 + G 71 -3.1 -4.96848 | opp_overlap 1267316 1267338, overlap 1267313 AGACCCCATAGTCGT GAACAGGCTCAGGGTCAGT GAT ATTAACCCTGAGCAGGAAC TTTTTGTGTCAGCCC Ssed_1067 1265710 - 1267503 + | putative glutamate synthase (NADPH) Ssed_1068 1267500 - 1269329 + | 2-ketoglutarate: NADP oxidoreductase, alpha subunit TERM 1246 1270119 - 1270135 + G 72 -5.7 -4.38712 | overlap 1270120 CATGACCATATAGTC ACGGCGG CGG TCGCCGA TTTTGTGCCGGTGAA Ssed_1069 1269405 - 1270457 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta Ssed_1070 1271285 - 1270587 - | hypothetical protein TERM 1247 1272001 - 1271972 - R 79 -10.8 -3.20349 | opp_overlap 1271971 1271972, overlap 1271970 GCTTGAAATCGAAGA GCACCTGAATGA GCCTTG TCTTTCAGGTGC ATTAATTTAGGGGGC TERM 1248 1271972 - 1272001 + r 76 -10.8 -2.70525 | opp_overlap 1271972 1271970, overlap 1271971 GCTTGAAATCGAAGA GCACCTGAATGA GCCTTG TCTTTCAGGTGC ATTAATTTAGGGGGC Ssed_1071 1272535 - 1272113 - | hypothetical protein TERM 1249 1272471 - 1272444 - G 86 -12 -3.60214 | ATGGCAAGCACATAA CCTATGGGGTCA GCGA CGACCCCGTAGG TAAGCAGTGCTGCGG TERM 1250 1272782 - 1272812 + r 90 -12.7 -3.59738 | opp_overlap 1272782 1272789, overlap 1272789 ATCAAATTCCAGACA CAAAAAAGCCTGC ACGAG GCAGGCTTTTTCG TTTGAAACTATGGTG TERM 1251 1272812 - 1272782 - R 100 -14.9 -2.93747 | opp_overlap 1272782 1272789, overlap 1272789 ATCAAATTCCAGACA CAAAAAAGCCTGC ACGAG GCAGGCTTTTTCG TTTGAAACTATGGTG TERM 1252 1272789 - 1272805 + r 93 -9.4 -4.98531 | opp_overlap 1272789 1272782, overlap 1272782 TCCAGACACAAAAAA GCCTGC ACGAG GCAGGC TTTTTCGTTTGAAAC TERM 1253 1272805 - 1272789 - R 100 -9.4 -5.4251 | opp_overlap 1272782 1272789, overlap 1272782 TCCAGACACAAAAAA GCCTGC ACGAG GCAGGC TTTTTCGTTTGAAAC TERM 1254 1273077 - 1273055 - R 91 -7.7 -5.27477 | opp_overlap 1273058, overlap 1273058 ATTTCAATCAAAAAA GAACCTGCC AGTTA GGCAGGTTT TATTATCAGTTGATC TERM 1255 1273058 - 1273074 + r 93 -9.4 -4.80959 | opp_overlap 1273058 1273055 TCAATCAAAAAAGAA CCTGCC AGTTA GGCAGG TTTTATTATCAGTTG TERM 1256 1273074 - 1273058 - R 93 -9.4 -4.72473 | opp_overlap 1273058, overlap 1273055 TCAATCAAAAAAGAA CCTGCC AGTTA GGCAGG TTTTATTATCAGTTG Ssed_1072 1274945 - 1273107 - | RpoD family RNA polymerase sigma factor Ssed_1073 1276789 - 1275068 - | DNA primase TERM 1257 1276867 - 1276844 - R 100 -13.2 -4.72277 | opp_overlap 1276847 AACAATATAAACAAA CAAGCCGTGC AAGA GCACGGCTTA TTCACGCATCAAATT TERM 1258 1276847 - 1276864 + r 90 -12.7 -3.62597 | opp_overlap 1276844 AATATAAACAAACAA GCCGTGC AAGA GCACGGC TTATTCACGCATCAA Ssed_1074 1277330 - 1276887 - | GatB/YqeY domain-containing protein Ssed_1075 1277552 - 1277337 - | 30S ribosomal protein S21 TERM 1259 1277579 - 1277602 + H 76 -6.8 -4.42806 | overlap 1277580 1277582 CCTTAGGTGTAGTTG TTGGAGTCAA TCAC TTGACTCTAG TTTATTTAAAAATGG TERM 1260 1277838 - 1277848 + H 70 -3.2 -4.91109 | TTAACTAATTAAGCT GTCA TTT TGGC TTTTTATCCTAAAAA Ssed_1076 1277942 - 1278955 + | O-sialoglycoprotein endopeptidase TERM 1261 1279012 - 1279034 + T 80 -6.3 -4.73973 | opp_overlap 1279012 AACTACGATCTATAA GCTACGAGT TCATT GCTTGTAGC TTTCTTGTTTTATCT Ssed_1077 1279702 - 1279100 - | putative glycerol-3-phosphate acyltransferase PlsY TERM 1262 1279990 - 1279978 - H 70 -5.5 -4.33146 | ATAAAAAATCAGAAA CCGTC ATA GACAG AATTCACATTCGGAG Ssed_1078 1280011 - 1280364 + | dihydroneopterin aldolase Ssed_1079 1280365 - 1280862 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Ssed_1080 1280961 - 1281761 + | undecaprenyl pyrophosphate phosphatase Ssed_1081 1281820 - 1282716 + | rRNA (guanine-N(1)-)-methyltransferase Ssed_1082 1282834 - 1283835 + | ErfK/YbiS/YcfS/YnhG family protein TERM 1263 1283894 - 1283910 + T 100 -7.2 -5.80364 | opp_overlap 1283894 GCTTACGTGAAGAGA GCGTCC CTGGT GGGCGC TTTTTTTATTGGGGT TERM 1264 1284092 - 1284065 - T 80 -11.4 -2.79312 | overlap 1284067 AAAGGGGGGAGGAGA TATCGGCAACAC TAAT GCATTGCCGATA CAGACAAATTACTTC TERM 1265 1284090 - 1284067 - T 72 -9.6 -2.94218 | overlap 1284065 AGGGGGGAGGAGATA TCGGCAACAC TAAT GCATTGCCGA TACAGACAAATTACT Ssed_1083 1284367 - 1284101 - | major outer membrane lipoprotein, putative TERM 1266 1284220 - 1284208 - G 70 -7.7 -3.86822 | opp_overlap 1284208 1284217 TAACGTCTGCAGAAA GAGCA CCT TGCTC TGACTTCAGAGAGCT Ssed_1084 1285819 - 1284578 - | metal dependent phosphohydrolase TERM 1267 1285636 - 1285657 + g 71 -10.1 -2.88544 | TTTTTCGCTCCGTGC GGGCCAGAG CATA CTCTTGCCC TGTCTCAGGGTGCAG TERM 1268 1286438 - 1286424 - g 79 -11.4 -3.19463 | opp_overlap 1286433 CTGATCATCGATGAA GCGCAG CAT CTGCGC GCCGAAGTGCTTGAG Ssed_1085 1286031 - 1287656 + | peptidoglycan binding domain-containing protein TERM 1269 1287784 - 1287769 - g 71 -4 -4.81249 | TTCTAAACCCAAAAA CAACAC ACTG ATGTTG TCGCTCATCGTGATT TERM 1270 1288408 - 1288384 - g 71 -4.9 -4.5442 | overlap 1288385 GGTTGAAGTAGAAAA GTCTGTCGCCA GCC CGGTGACAGAG CCTAAACTCGACCCT Ssed_1086 1287656 - 1288675 + | general secretion pathway protein B Ssed_1087 1289996 - 1288749 - | citrate transporter TERM 1271 1288833 - 1288854 + g 71 -8.7 -3.79043 | opp_overlap 1288832 1288836, overlap 1288836 AGGAACGTACTTAAG GTAGCTGAC AAAA GTCAGCTCC TTTACCTTACTCATG TERM 1272 1290276 - 1290294 + r 71 -7.4 -3.95852 | opp_overlap 1290276 TGGGTGGAATAAAAA GGGACG AGAATTG CGTCCC TTTAATTAATCAACT TERM 1273 1290294 - 1290276 - R 86 -7.4 -5.06414 | opp_overlap 1290276 TGGGTGGAATAAAAA GGGACG AGAATTG CGTCCC TTTAATTAATCAACT TERM 1274 1290494 - 1290510 + r 93 -10.1 -4.81249 | opp_overlap 1290494 ACAGGCAATAAAAAA GGACGCG AGA TGCGTCC TTTTTCGATTTCAGC TERM 1275 1290510 - 1290494 - R 100 -9.4 -5.49234 | opp_overlap 1290494 ACAGGCAATAAAAAA GGACGC GAGAT GCGTCC TTTTTCGATTTCAGC Ssed_1088 1291840 - 1290554 - | glutamate-1-semialdehyde-2,1-aminomutase Ssed_1089 1292887 - 1291868 - | aspartate carbamoyltransferase TERM 1276 1292315 - 1292327 + g 71 -2.7 -4.88067 | overlap 1292316 TTTCGGTGAAACCAG TGTAA AAC TTACG TTTTTATACATACAT Ssed_1090 1293325 - 1293828 + | hypothetical protein Ssed_1091 1294091 - 1295548 + | aspartate ammonia-lyase TERM 1277 1295607 - 1295586 - T 93 -13 -3.41262 | TAGACAACAGATGAA GTCGCGGG TGATTT CCCGCGAC GCTTAGGCCGGTTTG Ssed_1092 1296239 - 1295679 - | NAD(P)H dehydrogenase (quinone) TERM 1278 1295920 - 1295936 + g 78 -5.2 -4.84182 | overlap 1295926 GCCGTTGCACCTGCT GTGATA GAGAG TATCAC TTTCTTGTTTTTTAA TERM 1279 1295926 - 1295940 + g 73 -5 -4.67173 | overlap 1295920 GCACCTGCTGTGATA GAGAGT ATC ACTTTC TTGTTTTTTAACTTA TERM 1280 1296406 - 1296367 - R 77 -6.4 -4.60255 | opp_overlap 1296368, overlap 1296372 ATAAGGGCTGAAAAA GGGAAGCGATAAAATCGC TATG GCTTCCTTATCGCTTGCC CGGCTTAGAAATGAG Ssed_1093 1298563 - 1296854 - | Cl-channel, voltage-gated family protein TERM 1281 1298969 - 1298982 + G 83 -6.7 -4.84761 | AAGCAGCGTGAACTC GAGAG AGAG CTCTC TTTTTATCGCAGTAT TERM 1282 1299026 - 1299016 - g 77 -8.2 -4.19746 | GGCACCTGAAAATAA CGCC GAT GGCG TATCCATCAATGGGC Ssed_1094 1298660 - 1299499 + | hypothetical protein Ssed_1095 1299626 - 1299988 + | iron-sulfur cluster insertion protein ErpA TERM 1283 1300019 - 1300040 + T 100 -13.1 -5.1675 | opp_overlap 1300019 ATTGATTCAAAAAAA GCCAGTTGT TAAC ACAACTGGC TTTTTTAATACCTGC TERM 1284 1300040 - 1300019 - T 100 -13.1 -5.47821 | opp_overlap 1300019 ATTGATTCAAAAAAA GCCAGTTGT TAAC ACAACTGGC TTTTTTAATACCTGC Ssed_1096 1300589 - 1300071 - | hypothetical protein Ssed_1097 1300972 - 1300601 - | hypothetical protein TERM 1285 1301223 - 1301182 - R 91 -13.2 -3.1211 | opp_overlap 1301177 CAGTAGATGACTTAA TTTTCACCCTGGTAACCA TCCAAT TTGTTACCAGGGTGAGAA GGCGAGTGTTGAACA TERM 1286 1301229 - 1301239 + r 70 -5.4 -4.4078 | AGGGTGAGAAGGCGA GTGT TGA ACAC TTTTACTTGCGAAAC Ssed_1098 1302688 - 1301267 - | putative alkaline phosphatase Ssed_1099 1305289 - 1302713 - | peptidase S9 prolyl oligopeptidase TERM 1287 1305355 - 1305338 - R 90 -12.7 -3.47078 | opp_overlap 1305335 TATTTGAGAGGATAA GCGCCCT ATGA AGGGCGC TACAGTTTAGTTACT Ssed_1100 1308178 - 1305410 - | outer membrane receptor protein Ssed_1101 1308533 - 1310674 + | transcriptional regulator domain-containing protein TERM 1288 1310708 - 1310687 - T 100 -13.7 -4.14739 | opp_overlap 1310700 TGATTCAGTTTAAAA GCTGGAGGC TAGT GCCCCCAGC CAAAGGGCTTATACC Ssed_1102 1312207 - 1311098 - | anhydro-N-acetylmuramic acid kinase TERM 1289 1311422 - 1311445 + g 77 -10.2 -3.61398 | overlap 1311440 AATGTCAGCTTCATT CAGGTAGCCG AATT CGGCGGCCTG TTGTTCAAGCCAGGC TERM 1290 1312304 - 1312326 + r 72 -9.8 -3.05463 | opp_overlap 1312287 GGCACCTGACATCGG CTCCGGATCT GGT AGACCCGGGG TTGCCTGACCGACGT Ssed_1103 1313789 - 1312362 - | peptidase M23B TERM 1291 1313719 - 1313705 - G 76 -8.6 -4.02817 | CCGGGATAAGAAGAA TGGTCA GTG TGACCA AAACCAGAAGTGTCA Ssed_1104 1313930 - 1315126 + | tyrosyl-tRNA synthetase TERM 1292 1315259 - 1315240 - T 100 -13.6 -4.27796 | opp_overlap 1315240 TAATAAACGTTAAAA CGGCCTGT CTAT ACAGGCCG TTTTTGATCCCGCCC TERM 1293 1315240 - 1315259 + T 100 -13.6 -4.72272 | opp_overlap 1315240 TAATAAACGTTAAAA CGGCCTGT CTAT ACAGGCCG TTTTTGATCCCGCCC Ssed_1105 1316913 - 1315279 - | alkaline phosphatase TERM 1294 1317275 - 1317315 + r 100 -16.3 -3.32022 | opp_overlap 1317275 GCGGGGAAGGAGAAA GCCTGATTCAGCCATCT GTGTAGG GGACGGCTGAATCAGGC TTAGTGTCTGGAACA TERM 1295 1317315 - 1317275 - R 100 -17.8 -4.05446 | opp_overlap 1317275 GCGGGGAAGGAGAAA GCCTGATTCAGCCATC TGTGTAGGG GACGGCTGAATCAGGC TTAGTGTCTGGAACA Ssed_1106 1319014 - 1317485 - | hypothetical protein Ssed_1107 1320269 - 1319016 - | cytochrome-c peroxidase Ssed_1108 1321024 - 1320278 - | hypothetical protein TERM 1296 1321126 - 1321098 - R 88 -8.9 -4.60041 | ATCTATTTCGAAAAA TGCTGACGAATTT TTG AAAAACGTCAGCA ATAACAGGATTTATT Ssed_1109 1322198 - 1321140 - | hypothetical protein TERM 1297 1321834 - 1321819 - G 75 -5.4 -4.67982 | CCGTAGTGAATAAAA CCATTG AAGG CAACGG AGGTGTTTAGTTTAA TERM 1298 1322379 - 1322354 - R 100 -16.3 -3.63805 | overlap 1322357 ATTTTAGATGGCAAA GAAGCCTGATG AGTA CATCAGGCTTC AGAATACCGGCCTCA TERM 1299 1322376 - 1322357 - R 91 -12.2 -3.95378 | overlap 1322354 TTAGATGGCAAAGAA GCCTGATG AGTA CATCAGGC TTCAGAATACCGGCC Ssed_1110 1324989 - 1322401 - | Outer membrane receptor protein mostly Fe transport-like protein Ssed_1111 1325933 - 1325454 - | hypothetical protein Ssed_1112 1326556 - 1325930 - | hypothetical protein Ssed_1113 1326993 - 1326553 - | hypothetical protein Ssed_1114 1328043 - 1327060 - | cobalamin biosynthesis protein CbiB Ssed_1115 1328763 - 1328071 - | adenosylhomocysteine nucleosidase TERM 1300 1330000 - 1330026 + G 82 -10.2 -3.84246 | opp_overlap 1329991 1330000 1330003, overlap 1330003 ATTTAAGCAGATCAA TGACCAGCATGG ACA CCATGTTGGTGA TTTAGTGATTAAAGA TERM 1301 1330003 - 1330023 + G 78 -11.9 -2.99951 | opp_overlap 1329991 1330000 1330003, overlap 1330000 TAAGCAGATCAATGA CCAGCATGG ACA CCATGTTGG TGATTTAGTGATTAA Ssed_1116 1329077 - 1330384 + | hypothetical protein TERM 1302 1330452 - 1330481 + T 72 -9.3 -3.3482 | opp_overlap 1330454, overlap 1330454 CATCTATTAAATAAA AACGGTATAACGC CTAA GCGCTATACCGTA TTACTTAACGCCTTA TERM 1303 1330454 - 1330479 + T 83 -11.9 -3.24032 | opp_overlap 1330454, overlap 1330452 TCTATTAAATAAAAA CGGTATAACGC CTAA GCGCTATACCG TATTACTTAACGCCT TERM 1304 1330479 - 1330454 - T 100 -14.1 -5.33405 | opp_overlap 1330454 1330452 TCTATTAAATAAAAA CGGTATAACGC CTAA GCGCTATACCG TATTACTTAACGCCT Ssed_1117 1331222 - 1330518 - | hypothetical protein Ssed_1118 1332458 - 1331241 - | putative transporter, BCCT family protein TERM 1305 1332560 - 1332599 + r 76 -10.9 -2.53263 | opp_overlap 1332558 1332556, overlap 1332565 GGCTGCAAAAATCCC TCAAGCCTTAATTGCCG CTTTAA CGACAGTTAAGGTTTGA TAAATTAAACGTGGC TERM 1306 1332565 - 1332594 + r 71 -7.2 -3.794 | opp_overlap 1332558 1332556, overlap 1332560 CAAAAATCCCTCAAG CCTTAATTGCCG CTTTAA CGACAGTTAAGG TTTGATAAATTAAAC Ssed_1119 1334383 - 1332689 - | choline dehydrogenase Ssed_1120 1335856 - 1334393 - | betaine aldehyde dehydrogenase TERM 1307 1335133 - 1335157 + g 71 -6.4 -4.16842 | gap 1 TGGTGACCTCTTTCA GTGA-GCCCGC AGCG GCGGCCATCAC TTTCTTGCCCGTACC Ssed_1121 1336452 - 1335847 - | transcriptional regulator BetI TERM 1308 1336549 - 1336529 - H 90 -11.3 -3.81414 | opp_overlap 1336532, overlap 1336532 ACGTTCAATTAACAA CAACTCTAA TGG TTAGAGTTG TAACTATCAACCTTT TERM 1309 1336546 - 1336532 - H 73 -7.2 -4.0342 | opp_overlap 1336532, overlap 1336529 TTCAATTAACAACAA CTCTAA TGG TTAGAG TTGTAACTATCAACC TERM 1310 1336882 - 1336895 + H 86 -2.4 -5.93809 | opp_overlap 1336882 AGGCTCTGTTTAAAC GAAC TGATTT GTTC TTTTTTTTGTACAAG TERM 1311 1337290 - 1337304 + G 73 -10 -3.4252 | CTATCGTCAGGCCGC CGGTTG GCC CAACCG TTGTGGTGCATGGAG Ssed_1122 1337070 - 1338044 + | inosine/uridine-preferring nucleoside hydrolase TERM 1312 1338078 - 1338054 - T 75 -10.2 -3.1886 | opp_overlap 1338049 AGTTAACGGCATGAA TTACATCGAT ATCGA ATCGATGTAA TCAGTATCTTAAATT TERM 1313 1338100 - 1338122 + T 100 -13.5 -5.06414 | TCTTAAATTGTCTGA GGCGTAGTG TTTTC CACTACGCC TTTTTATTGCCAGCC TERM 1314 1338127 - 1338158 + T 86 -8 -4.93333 | overlap 1338132 TCCACTACGCCTTTT TATTGCCAGCCTTC GAAT GAAGGCTGGTTACA TTTTCTCTTTTGGTT TERM 1315 1338132 - 1338153 + T 100 -14.5 -3.46285 | overlap 1338127 TACGCCTTTTTATTG CCAGCCTTC GAAT GAAGGCTGG TTACATTTTCTCTTT TERM 1316 1338194 - 1338214 + T 79 -8.3 -4.0371 | overlap 1338196 TTTTTGGAGTGTGTG CTTGAAGGT CGT ACCTTCATG TTTATCTAACGCCTG TERM 1317 1338196 - 1338212 + T 77 -9.5 -3.61232 | overlap 1338194 TTTGGAGTGTGTGCT TGAAGGT CGT ACCTTCA TGTTTATCTAACGCC Ssed_1123 1338895 - 1338557 - | hypothetical protein TERM 1318 1339334 - 1339366 + r 95 -15 -2.85606 | overlap 1339328 CTTTGGTGAGAGTGC GGCAGTGTTATAGC TGAGT GCCATAACACTGCC TGTAATACTATGTAG Ssed_1124 1340599 - 1339388 - | ribokinase TERM 1319 1340653 - 1340693 + r 76 -9.2 -3.75295 | gap 1, opp_overlap 1340665, overlap 1340665 ATTAAGATGAAAGCT TAGCATG-TAAAACGCACC ACTT GGTTCGTTTTATCATGCAA TTCCTTTCTTCTGTT TERM 1320 1340791 - 1340772 - R 100 -7.8 -5.83822 | overlap 1340773 TACAGGCAAAAAAAA GGCGCATC GTTC GATGCGCT AAAATCACAAGTAAA TERM 1321 1340790 - 1340773 - R 90 -11.3 -4.08666 | overlap 1340772 ACAGGCAAAAAAAAG GCGCATC GTTC GATGCGC TAAAATCACAAGTAA Ssed_1125 1342266 - 1340857 - | glutamate synthase subunit beta Ssed_1126 1346721 - 1342273 - | glutamate synthase subunit alpha TERM 1322 1343537 - 1343548 + g 75 -5.8 -4.56775 | TGAAGTCGGATCTTA TGGC GAAG GCCA TTTTTAACCAGAGAT Ssed_1127 1347232 - 1348158 + | putative radical SAM protein Ssed_1128 1348333 - 1348698 + | Hpt protein TERM 1323 1348816 - 1348763 - f 90 -11.3 -4.04897 | gap 1, opp_overlap 1348776, overlap 1348776 AGAATGAGAAGTAAA GAGAAGTGATAAAGCGCTAATGAAAC CGA GTTTCATTAGCGCTTTTT-ATTGCCC CCCATTCATTCCAAT TERM 1324 1348776 - 1348804 + F 100 -19.1 -5.06414 | opp_overlap 1348763 1348776 AAGAGAAGTGATAAA GCGCTAATGAAAC CGA GTTTCATTAGCGC TTTTTATTGCCCCCC TERM 1325 1348804 - 1348776 - f 100 -19.1 -4.0174 | opp_overlap 1348776, overlap 1348763 AAGAGAAGTGATAAA GCGCTAATGAAAC CGA GTTTCATTAGCGC TTTTTATTGCCCCCC Ssed_1129 1349006 - 1349917 + | LysR family transcriptional regulator TERM 1326 1349930 - 1349959 + T 100 -10.1 -5.62045 | opp_overlap 1349928, overlap 1349928 TAGCCTAAGAAAGTT GCTGTCAGTAATT ATTG GATCACTGACAGC TTTTTTATTCTCTCT Ssed_1130 1351096 - 1350023 - | putative adenylate/guanylate cyclase Ssed_1131 1352064 - 1351390 - | DNA mismatch repair protein Ssed_1132 1352758 - 1353276 + | dinucleoside polyphosphate hydrolase Ssed_1133 1353349 - 1355583 + | phosphoenolpyruvate-protein phosphotransferase PtsP Ssed_1134 1355690 - 1356493 + | hypothetical protein Ssed_1135 1356653 - 1357504 + | thymidylate synthase TERM 1327 1357546 - 1357593 + F 75 -8.1 -4.0641 | opp_overlap 1357546 1357544 1357548, overlap 1357548 TTAGCTGAAAAATCA G-AGGTAACGAACATCAGATTGT TATA ATAATC-GATATTCGTTACCTGC TTTATATGAATAAAA TERM 1328 1357590 - 1357548 - f 79 -10.9 -3.18433 | gap 1, opp_overlap 1357546 1357548, overlap 1357546 1357544 AGCTGAAAAATCAGA GGTAACGAACATCAGATTGT TATA ATAATC-GATATTCGTTACC TGCTTTATATGAATA TERM 1329 1357548 - 1357590 + F 78 -10.9 -3.07132 | gap 1, opp_overlap 1357548 1357546 1357544, overlap 1357546 AGCTGAAAAATCAGA GGTAACGAACATCAGATTGT TATA ATAATC-GATATTCGTTACC TGCTTTATATGAATA Ssed_1136 1357815 - 1359014 + | Na+/H+ antiporter NhaA TERM 1330 1359037 - 1359048 + G 70 -2.2 -4.86731 | ACTATTAACACTTAC CCTG TGTT TAGG TTTTATTTCCACAGC Ssed_1137 1359011 - 1359394 + | hypothetical protein TERM 1331 1359475 - 1359500 + G 78 -8.9 -4.05446 | opp_overlap 1359475 ATGGTTCATAAAAAG GGCTCGGTGGC GAAA GCTGCCGAGGC TTTATGCTTAGCACC TERM 1332 1359666 - 1359700 + G 81 -8 -4.62783 | opp_overlap 1359681 AAGCTATGAGATGCT GGATATTCTCAACTAT CAA AAAGATGAGAATATTC TTTTTGAAGTCGGTA Ssed_1138 1359421 - 1360329 + | transcriptional activator NhaR Ssed_1139 1360387 - 1360638 + | hypothetical protein TERM 1333 1360660 - 1360682 + G 90 -14.2 -3.22102 | overlap 1360658 CTTAAAGGCTTCATT CGATCAGCGA TTA TCGCTGGTCG TCTTCTGCAGCGTGT Ssed_1140 1360619 - 1361050 + | hypothetical protein Ssed_1141 1362717 - 1361107 - | L-aspartate oxidase TERM 1334 1361438 - 1361474 + g 72 -5.8 -4.38712 | overlap 1361439 GAGTTCGATACCTGA CTTTCATCCCAGGCGG GTAAA CTGCCTGGCATGGGAA TTTTATGGAGCTGAC Ssed_1142 1362918 - 1363496 + | RNA polymerase sigma factor RpoE TERM 1335 1363491 - 1363472 - f 86 -7.8 -4.87665 | opp_overlap 1363487 GGCGATTGATAAAAA GCTTCAGC CTTT GCTGGAGC AGTAGCATCCTTTAA Ssed_1143 1363524 - 1364144 + | anti sigma-E protein, RseA Ssed_1144 1364174 - 1365106 + | sigma E regulatory protein, MucB/RseB Ssed_1145 1365131 - 1365586 + | positive regulator of sigma E, RseC/MucC TERM 1336 1366134 - 1366112 - g 75 -6.2 -4.63218 | overlap 1366114 CTGTCTTGAATAAAA TCGATCTGCC TCA GGCCGATCCA GAACGTGTCGCCGAT TERM 1337 1367029 - 1367007 - g 78 -5.7 -4.82901 | gap 1 CGGTGTGCAGAAAAA CTTGGTTTAC CACG GTAA-CCAAG TGGCCCTGACCTATG Ssed_1146 1365715 - 1367505 + | GTP-binding protein LepA TERM 1338 1367566 - 1367546 - f 100 -12.5 -5.53991 | opp_overlap 1367547, overlap 1367547 TAGTGAGCAAAAAAA GGCGCCGCA GTT TGCGGCGCT TTCGTTACTAACGTA TERM 1339 1367565 - 1367547 - f 100 -16 -3.9131 | opp_overlap 1367547, overlap 1367546 AGTGAGCAAAAAAAG GCGCCGCA GTT TGCGGCGC TTTCGTTACTAACGT TERM 1340 1367547 - 1367565 + F 100 -16 -3.95852 | opp_overlap 1367547 1367546 AGTGAGCAAAAAAAG GCGCCGCA GTT TGCGGCGC TTTCGTTACTAACGT TERM 1341 1367791 - 1367774 - g 79 -11.3 -3.53761 | opp_overlap 1367765, overlap 1367762 TAAGCGTCGTGCAAA GCTTGCG ATGG CGCAAGC GGTGGACGCTGATAT Ssed_1147 1367673 - 1368590 + | Signal peptidase I Ssed_1148 1368592 - 1369269 + | ribonuclease III Ssed_1149 1369266 - 1370273 + | GTP-binding protein Era TERM 1342 1370291 - 1370333 + F 100 -12.8 -5.93809 | CTCTTCGCACAATAA TGCCTCTTGACTCGGTAATG ATT CATTGCCGGGTTGATGGGCA TTTTTTTTGTGCCAA Ssed_1150 1370385 - 1371065 + | DNA repair protein RecO TERM 1343 1371506 - 1371548 + G 73 -10.6 -3.18849 | opp_overlap 1371497 1371505, overlap 1371504 AACTCACCACCGAAG GCGGCTTAGATGTTGCCGGT CAG ATGGGCAAGATTGAAGCCGC TATTCGTCGTCTAAG Ssed_1151 1371193 - 1371930 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 1344 1371938 - 1371984 + F 100 -13.8 -3.965 | GCGAATAAGTTGTTA GGTTCTAGATGCGAGTTCCTAG GCC CTAGGATCTCGTACCTAGGAAC TTCTTAATTTTAAGG Ssed_1152 1372006 - 1372404 + | Holo-(acyl-carrier-protein) synthase Ssed_1153 1373377 - 1373601 + | putative riboflavin biosynthesis protein RibD Ssed_1154 1374814 - 1373792 - | sensory box protein Ssed_1155 1375082 - 1375627 + | hypothetical protein TERM 1345 1375707 - 1375733 + T 100 -18.2 -4.72986 | opp_overlap 1375713, overlap 1375713 GATCTCTTCTTAACG TAAAAAGGCGCC TGA GGCGCCTTTTTA TTTTTGATAACACTG TERM 1346 1375713 - 1375727 + T 100 -12.8 -5.65496 | opp_overlap 1375713, overlap 1375707 TTCTTAACGTAAAAA GGCGCC TGA GGCGCC TTTTTATTTTTGATA TERM 1347 1375727 - 1375713 - T 100 -12.8 -4.74103 | opp_overlap 1375713 1375707 TTCTTAACGTAAAAA GGCGCC TGA GGCGCC TTTTTATTTTTGATA Ssed_1156 1377059 - 1375764 - | hypothetical protein TERM 1348 1376552 - 1376570 + g 83 -7.4 -4.68384 | overlap 1376554 TTCTCAGCTCCTCCT GGCTCAGA GCA TCTGAGGC TTTTATTGAATGAAT Ssed_1157 1378034 - 1377246 - | cytochrome c assembly protein TERM 1349 1377471 - 1377459 - G 75 -5.5 -4.7261 | opp_overlap 1377463, overlap 1377463 ATCGAGGAAAATAAA GCCAG TCG CTAGC GAGAGACTTAATAGA TERM 1350 1378872 - 1378850 - g 81 -3.4 -5.51046 | opp_overlap 1378849 GAAAGAGATAAAAAA TCGGTACT GGTTGTT AGTGCCGA CGTTTATCGTCCGGC Ssed_1158 1378460 - 1379833 + | signal recognition particle protein TERM 1351 1379860 - 1379891 + F 80 -8 -4.3851 | opp_overlap 1379860 TTTATAAGTTAATGA GCCCACAGATGCTA ATAT TGATGTCTGTGGGC TTTCTATTTGCTGTC TERM 1352 1379956 - 1379946 - f 81 -5.4 -5.05782 | opp_overlap 1379946 AGTGACCGCAAAAAA GGTT AAA AACC ATTGGTGCCCATTTC TERM 1353 1380056 - 1380085 + F 81 -2.7 -5.67529 | opp_overlap 1380075 CGTCCGGCTTTCTAT CTGGGACTCTTCG CGAA CACGGGGTTCCAG TTTTTATTTTTGCTT TERM 1354 1380094 - 1380113 + F 70 -9.4 -2.71731 | GTTCCAGTTTTTATT TTTGCTTC ATAA GAAGCAAA TCATTAGAGGATAAA Ssed_1159 1380135 - 1380386 + | 30S ribosomal protein S16 Ssed_1160 1380407 - 1380937 + | 16S rRNA-processing protein Ssed_1161 1380953 - 1381681 + | tRNA (guanine-N(1)-)-methyltransferase Ssed_1162 1381735 - 1382088 + | 50S ribosomal protein L19 TERM 1355 1382125 - 1382156 + F 100 -17.4 -4.07568 | opp_overlap 1382133, overlap 1382133 AAGATGCAGTGTTCG CACAATAACCCGCC TTAT GGCGGGTTTTTGTG TTTTAAGGGGGCGAG TERM 1356 1382133 - 1382148 + F 100 -11.8 -5.28983 | opp_overlap 1382133, overlap 1382125 GTGTTCGCACAATAA CCCGCC TTAT GGCGGG TTTTTGTGTTTTAAG TERM 1357 1382148 - 1382133 - f 89 -11.8 -3.78934 | opp_overlap 1382125 1382133 GTGTTCGCACAATAA CCCGCC TTAT GGCGGG TTTTTGTGTTTTAAG TERM 1358 1382250 - 1382238 - f 80 -7.7 -4.3208 | opp_overlap 1382231 1382243, overlap 1382231 GCGTATAACCTAAAA CCTAG GTT CTAGG AACTTTCCCCTTTAC Ssed_1163 1382435 - 1383526 + | phospho-2-dehydro-3-deoxyheptonate aldolase Ssed_1164 1383603 - 1384742 + | bifunctional chorismate mutase/prephenate dehydrogenase TERM 1359 1384782 - 1384797 + F 100 -10.4 -5.54907 | opp_overlap 1384781 1384780 ATCTTTTTGAAAATT GGGAGC TAAT GCTCCC TTTTTGTTTTCTACC Ssed_1165 1385259 - 1386917 + | hydroxylamine reductase Ssed_1166 1387039 - 1388142 + | oxidoreductase FAD-binding subunit Ssed_1167 1388253 - 1388588 + | hypothetical protein TERM 1360 1388629 - 1388608 - T 76 -7.3 -4.30809 | opp_overlap 1388610, overlap 1388610 TAAGATGTATTAAAA GAGAGGACT AAGC AGTCCTCTT TTTTATGCCTGTTTT TERM 1361 1388610 - 1388627 + T 100 -9.9 -5.30686 | opp_overlap 1388608 1388610 AGATGTATTAAAAGA GAGGACT AAGC AGTCCTC TTTTTTATGCCTGTT TERM 1362 1388627 - 1388610 - T 79 -9.9 -3.74902 | opp_overlap 1388610, overlap 1388608 AGATGTATTAAAAGA GAGGACT AAGC AGTCCTC TTTTTTATGCCTGTT Ssed_1168 1390633 - 1388645 - | chorismate mutase TERM 1363 1390690 - 1390673 - R 100 -12.7 -5.24129 | opp_overlap 1390673 TTTTGTTACAAAAAA GCCTCCC TAGT GGGAGGC TTTGGAATTTTCACT TERM 1364 1390673 - 1390690 + r 90 -12.7 -3.76815 | opp_overlap 1390673 TTTTGTTACAAAAAA GCCTCCC TAGT GGGAGGC TTTGGAATTTTCACT TERM 1365 1390921 - 1390905 - R 100 -13.7 -5.33866 | opp_overlap 1390905 TAAAGGCATAAAAAA GCGCACC AGA GGTGCGC TTTGGGTGGAACAAA TERM 1366 1390905 - 1390921 + r 95 -13.7 -3.64703 | opp_overlap 1390905 TAAAGGCATAAAAAA GCGCACC AGA GGTGCGC TTTGGGTGGAACAAA TERM 1367 1391013 - 1390989 - R 70 -8.7 -3.32294 | opp_overlap 1391012 TGAAACTCGTCACAA TGCTTAACTTT TGA AAAGTGAAGCA GGATATCGGGTTCCT Ssed_1169 1392050 - 1391688 - | ribosomal subunit interface protein TERM 1368 1392108 - 1392123 + H 78 -7.6 -4.43221 | opp_overlap 1392107 ATCCCCCATGAAAGT CGTGAT CTAA ATCACG TTTTGTCAGCTGTTT Ssed_1170 1392341 - 1393009 + | cytochrome b561 TERM 1369 1393065 - 1393088 + T 93 -12.5 -3.96298 | CGAATCATTCTTAGA GCTACCAGC AATTTA GCTGGTAGC TTTCATTGCTCAGTC Ssed_1171 1393588 - 1393127 - | cytochrome c, class II TERM 1370 1393558 - 1393544 - G 73 -10 -3.40175 | overlap 1393542 AGTCGCTAAAACAGA GCCTGT AAT ACAGGC GAGAATGGCTATTTT Ssed_1172 1393827 - 1394105 + | Trp operon repressor Ssed_1173 1394495 - 1394109 - | hypothetical protein TERM 1371 1394386 - 1394366 - G 74 -11.3 -2.98491 | AACGCATATTATAGA TTTTTGCAC CTA GTGCAAAAA CGACCATTGCAAAGA TERM 1372 1394584 - 1394612 + r 93 -13.2 -3.26998 | opp_overlap 1394584, overlap 1394579 1394575 TATAGATGAAAAAAA GCCCGTTACACT ATTTA AGTGTTACGGGC TTAGATTGATTTAAT TERM 1373 1394612 - 1394584 - R 100 -13.2 -5.60864 | opp_overlap 1394584 1394579 1394575 TATAGATGAAAAAAA GCCCGTTACACT ATTTA AGTGTTACGGGC TTAGATTGATTTAAT Ssed_1174 1395307 - 1394678 - | peptidylprolyl isomerase, FKBP-type TERM 1374 1395994 - 1395965 - H 90 -11.4 -4.05677 | opp_overlap 1395967, overlap 1395967 AAAGAATGTAAATAA TAGCCCGCTCCC ATAACA AGGAGCGGGCTT TTTTGTTTCTTAGGT TERM 1375 1395992 - 1395967 - H 95 -14 -3.59975 | opp_overlap 1395967, overlap 1395965 AGAATGTAAATAATA GCCCGCTCCC ATAACA AGGAGCGGGC TTTTTTGTTTCTTAG TERM 1376 1395967 - 1395992 + H 100 -13.3 -5.80003 | opp_overlap 1395967 1395965 AGAATGTAAATAATA GCCCGCTCC CATAACAA GGAGCGGGC TTTTTTGTTTCTTAG Ssed_1175 1396031 - 1398496 + | bifunctional aspartokinase I/homeserine dehydrogenase I Ssed_1176 1398493 - 1399431 + | homoserine kinase TERM 1377 1399537 - 1399523 - g 78 -7.8 -4.3208 | opp_overlap 1399526 CTGTATAACCTAAAA CACCCG CAG CAGGTG GTGAATTTTACCCAA TERM 1378 1399886 - 1399875 - g 77 -3 -5.21709 | CGTCAGATGAAAAAA TTAG TATT CTAA CTGCAACCTCAGGCG Ssed_1177 1399502 - 1400782 + | threonine synthase Ssed_1178 1401318 - 1401611 + | hypothetical protein TERM 1379 1401662 - 1401682 + T 79 -9.8 -3.70149 | opp_overlap 1401662, overlap 1401647 TCTTGGTTGTTTAAA GCACTGTA ATGGC TACAGTGC TTTAGCTAATATAGA TERM 1380 1401682 - 1401662 - T 79 -10.5 -3.53012 | opp_overlap 1401662 1401647 TCTTGGTTGTTTAAA GCACTGTAA TGG CTACAGTGC TTTAGCTAATATAGA Ssed_1179 1402559 - 1401699 - | deoxyribonuclease IV (phage-T(4)-induced) TERM 1381 1403586 - 1403576 - g 70 -2.4 -4.85918 | CATCACAGAACAAAA GCAG TTG CAGC AGTTGATGGCGAGAA TERM 1382 1404573 - 1404557 - g 71 -6.6 -4.15044 | opp_overlap 1404556 GCCTGGTGGAATAAA TGGCTA TGAGT TAGCCA ATGAATTGTCATCGA Ssed_1180 1402674 - 1404752 + | PAS/PAC sensor hybrid histidine kinase Ssed_1181 1404834 - 1405928 + | response regulator receiver protein Ssed_1182 1406065 - 1406610 + | hemerythrin HHE cation binding domain-containing protein TERM 1383 1406889 - 1406859 - T 91 -13.5 -2.87881 | opp_overlap 1406866, overlap 1406866 TAAGTGTTCCAGACA CAAAAAAGAGCGC ATTAA GCGCTCTTTTTTA TACAAGATAAAACAT TERM 1384 1406882 - 1406866 - T 100 -9.4 -5.4251 | opp_overlap 1406866, overlap 1406859 TCCAGACACAAAAAA GAGCGC ATTAA GCGCTC TTTTTTATACAAGAT TERM 1385 1406866 - 1406882 + T 100 -9.4 -5.24531 | opp_overlap 1406866 1406859 TCCAGACACAAAAAA GAGCGC ATTAA GCGCTC TTTTTTATACAAGAT Ssed_1183 1407090 - 1406905 - | hypothetical protein TERM 1386 1407093 - 1407105 + r 83 -3.4 -5.55001 | CTAATCGATTCATGG CAAC CTCCT GTTG TTTTATTTTTTGTTC TERM 1387 1407278 - 1407293 + r 90 -9 -5.16572 | opp_overlap 1407278 AGCGAATAAAAAAAA GCCAGT ACAA ACTGGC TTTTTTACGTTAGAT TERM 1388 1407293 - 1407278 - R 100 -9 -6.11243 | opp_overlap 1407278 AGCGAATAAAAAAAA GCCAGT ACAA ACTGGC TTTTTTACGTTAGAT Ssed_1184 1408953 - 1407316 - | glucose-6-phosphate isomerase TERM 1389 1407558 - 1407578 + g 71 -8.2 -3.65415 | overlap 1407554 1407576 CCATTAAAATGGTGT TGCTGGGC TTATT GCCCTGCA TTACTTTATGCTTCG TERM 1390 1408140 - 1408121 - G 75 -7.8 -4.2461 | ATCCCGACCAATAAA GCTATCGG GAGT CCGATGGC AGACCAAAGAGAGTA Ssed_1185 1409923 - 1408967 - | transaldolase B TERM 1391 1410166 - 1410147 - R 87 -3.5 -5.77988 | opp_overlap 1410148, overlap 1410148 ATACAGATAAAAAAA CCGCCAC ACAGAA GTAGCGA TTTCTTATATAAATG TERM 1392 1410455 - 1410435 - R 100 -14.1 -5.81412 | opp_overlap 1410432 1410431 TTCAGGCAAAAAAAA GTGCACTCT AAA AGAGTGCAC TGACTGTTATCAACT Ssed_1186 1412857 - 1410491 - | putative phosphoketolase TERM 1393 1414166 - 1414180 + G 85 -7.8 -4.66318 | opp_overlap 1414166, overlap 1414167 ACCTAACCCAAACCA TCCTGC ATC GCAGGG TTTTGTTCAGATGAT Ssed_1187 1413288 - 1414739 + | amino acid carrier protein TERM 1394 1414800 - 1414817 + F 100 -8.4 -5.71983 | opp_overlap 1414792 1414800, overlap 1414793 GCACAATCTAAAAAA CCACGC GAATTA GCGTGG TTTTTTTATGCTTGC TERM 1395 1414817 - 1414800 - f 93 -8.4 -5.1925 | opp_overlap 1414800 1414793, overlap 1414792 GCACAATCTAAAAAA CCACGC GAATTA GCGTGG TTTTTTTATGCTTGC Ssed_1188 1414875 - 1415648 + | hypothetical protein TERM 1396 1415706 - 1415720 + T 100 -11.4 -5.60993 | opp_overlap 1415706 GCCGGGAATAAAAAA GCAGCC AAA GGCTGC TTTTTTTATGAGAGA TERM 1397 1415720 - 1415706 - T 100 -11.4 -5.4505 | opp_overlap 1415706 GCCGGGAATAAAAAA GCAGCC AAA GGCTGC TTTTTTTATGAGAGA Ssed_1189 1417181 - 1415748 - | peptidase M28 TERM 1398 1415954 - 1415966 + g 80 -9.1 -4.25104 | opp_overlap 1415954 GTCTGAGTGAAGCTA CAGGG ACA CCCTG TTTTGGTAGCACGGA Ssed_1190 1417317 - 1417613 + | ArsR family transcriptional regulator TERM 1399 1417633 - 1417658 + T 100 -7.7 -5.64274 | GTTATTCATCTTCAA CTGACAAAGTT TACA GATTTTGTCAG TTTTTTTATGCCTGA TERM 1400 1417739 - 1417710 - T 87 -12.3 -3.39995 | opp_overlap 1417718, overlap 1417718 GGCAAAAAACAGATA TAAAAAAACCGGC CTAA GCCGGTTTTTTAA ACGCTATCTAAAATT TERM 1401 1417718 - 1417731 + T 93 -9.5 -5.02476 | opp_overlap 1417710 1417718 ACAGATATAAAAAAA CCGGC CTAA GCCGG TTTTTTAAACGCTAT TERM 1402 1417731 - 1417718 - T 100 -9.5 -5.77988 | opp_overlap 1417718, overlap 1417710 ACAGATATAAAAAAA CCGGC CTAA GCCGG TTTTTTAAACGCTAT Ssed_1191 1418019 - 1417753 - | 30S ribosomal protein S20 TERM 1403 1417888 - 1417917 + g 72 -5.8 -4.48299 | gap 1 TTCAGTAGCCGCTTT GTGATCGCCAGCA TTAAT TGCTG-CGATAAC TTTCTTTACGTATGA TERM 1404 1419477 - 1419491 + G 71 -2.8 -4.88228 | CTATGGTGAGTAATA TGGTGT TTA ACGTCA TTTTTGCTATTCCAT Ssed_1192 1418267 - 1419826 + | integral membrane protein MviN Ssed_1193 1419924 - 1420859 + | riboflavin biosynthesis protein RibF Ssed_1194 1420891 - 1423713 + | isoleucyl-tRNA synthetase TERM 1405 1423758 - 1423737 - f 100 -14.5 -3.45768 | opp_overlap 1423737 GTTAATACTAACCAA GTCGGAAGC GTAA GCTTCCGAC TTTCGTTAGTCGATG TERM 1406 1423737 - 1423758 + F 100 -14.5 -3.96298 | opp_overlap 1423737 GTTAATACTAACCAA GTCGGAAGC GTAA GCTTCCGAC TTTCGTTAGTCGATG Ssed_1195 1423851 - 1424381 + | Signal peptidase II Ssed_1196 1424387 - 1424809 + | peptidylprolyl isomerase, FKBP-type Ssed_1197 1424813 - 1425760 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 1407 1425816 - 1425789 - f 82 -11.4 -3.24456 | opp_overlap 1425795, overlap 1425795 AGATAGTATTATTAA TAAAAAGGAGGC TTAA GCCTCCTTTTTT GTTGCCTGAATTTCA TERM 1408 1425795 - 1425810 + F 100 -10.4 -5.4833 | opp_overlap 1425789 1425795 TATTATTAATAAAAA GGAGGC TTAA GCCTCC TTTTTTGTTGCCTGA TERM 1409 1425810 - 1425795 - f 93 -10.4 -5.15167 | opp_overlap 1425795, overlap 1425789 TATTATTAATAAAAA GGAGGC TTAA GCCTCC TTTTTTGTTGCCTGA TERM 1410 1425890 - 1425848 - f 72 -10 -2.55015 | opp_overlap 1425856, overlap 1425844 ACTGGATCTAATGGA GTCGATTTTTAGACACTAAT ATT ACTAGCGCCTAACATTCGAC TCATCTATGATTAAC Ssed_1198 1426002 - 1426523 + | type IV pilus modification protein PilV Ssed_1199 1426524 - 1427510 + | prepilin-type cleavage/methylation-like protein TERM 1411 1427683 - 1427694 + G 71 -4.4 -4.77036 | TTGCCGATGGCGGGC TCAC TCAG GTGA TTTTTGATAATGCGG Ssed_1200 1427523 - 1427957 + | type IV pilus assembly protein PilX TERM 1412 1430294 - 1430283 - g 78 -5.8 -4.68724 | GGAGTTAAGAGAAAA CCTG CCAA CAGG TGAACACAGTGTCTA Ssed_1201 1427962 - 1431537 + | type IV pilin biogenesis protein, putative Ssed_1202 1431537 - 1431929 + | type IV pilus biogenesis protein PilE Ssed_1203 1431926 - 1432228 + | hypothetical protein Ssed_1204 1432979 - 1432491 - | methylation site containing protein TERM 1413 1433075 - 1433052 - R 90 -12.6 -3.65535 | overlap 1433048 TCAAATAACAATTAA TTACAGCCAA AATA TTGGCTGTAA AGGAAAAATTGACAG Ssed_1205 1433624 - 1433115 - | type IV pilus biogenesis protein, putative Ssed_1206 1433874 - 1434212 + | nitrogen regulatory protein P-II TERM 1414 1434228 - 1434281 + T 90 -12.8 -3.75898 | opp_overlap 1434237 1434240 1434243, overlap 1434230 1434237 1434243 TCGACTCTTTTTCTG TTTTAGAAATAACAATACCGCAGA AACTTC TCTGCGGTATTATTATTTCTAATC TTTGAATCGTTTATT TERM 1415 1434230 - 1434279 + T 100 -19.8 -3.44924 | opp_overlap 1434237 1434240 1434243, overlap 1434228 1434237 1434243 GACTCTTTTTCTGTT TTAGAAATAACAATACCGCAGA AACTTC TCTGCGGTATTATTATTTCTAA TCTTTGAATCGTTTA TERM 1416 1434272 - 1434237 - T 100 -15 -3.85698 | opp_overlap 1434230 1434228 1434237 1434243, overlap 1434240 1434243 TTTCTGTTTTAGAAA TAACAATACCGCAGAA ACTT CTCTGCGGTATTATTA TTTCTAATCTTTGAA TERM 1417 1434237 - 1434272 + T 91 -12.1 -4.1043 | opp_overlap 1434237 1434240 1434243, overlap 1434230 1434228 1434243 TTTCTGTTTTAGAAA TAACAATACCGCAGA AACTTC TCTGCGGTATTATTA TTTCTAATCTTTGAA TERM 1418 1434269 - 1434240 - T 93 -12.3 -4.06419 | opp_overlap 1434237 1434230 1434228 1434243, overlap 1434237 1434243 CTGTTTTAGAAATAA CAATACCGCAGAA ACTT CTCTGCGGTATTA TTATTTCTAATCTTT TERM 1419 1434266 - 1434243 - T 95 -11.8 -4.15703 | opp_overlap 1434237 1434230 1434228 1434243, overlap 1434240 1434237 TTTTAGAAATAACAA TACCGCAGAA ACTT CTCTGCGGTA TTATTATTTCTAATC TERM 1420 1434243 - 1434266 + T 90 -11.1 -4.17309 | opp_overlap 1434243 1434240 1434237, overlap 1434237 1434230 1434228 TTTTAGAAATAACAA TACCGCAGA AACTTC TCTGCGGTA TTATTATTTCTAATC Ssed_1207 1435311 - 1434292 - | alanine racemase Ssed_1208 1435747 - 1438359 + | TonB-dependent receptor TERM 1421 1438381 - 1438398 + F 100 -12.7 -5.06414 | opp_overlap 1438381 ATTAATCTCTTTAAA GCCCAGC ACAT GCTGGGC TTTTTATTGAAGAGA TERM 1422 1438398 - 1438381 - f 90 -12.7 -3.55801 | opp_overlap 1438381 ATTAATCTCTTTAAA GCCCAGC ACAT GCTGGGC TTTTTATTGAAGAGA TERM 1423 1438464 - 1438453 - f 73 -2.2 -5.252 | GAGGTGTATAAAAAA GACT AATT AGCC TGTTAGCTTAGTGTT Ssed_1209 1438522 - 1440048 + | tryptophan halogenase TERM 1424 1440080 - 1440121 + T 73 -8.7 -3.6502 | opp_overlap 1440079, overlap 1440081 1440083 GTAAAATAAACGTAT TTGCTATTGCAGTAGAGGC TAGG GCCTCTACTGCGAAGTCAC TTTAGCTAGAGGCTG TERM 1425 1440081 - 1440120 + T 81 -12.2 -2.78798 | opp_overlap 1440079, overlap 1440080 1440083 TAAAATAAACGTATT TGCTATTGCAGTAGAGGC TAGG GCCTCTACTGCGAAGTCA CTTTAGCTAGAGGCT TERM 1426 1440083 - 1440117 + T 93 -14.5 -2.66272 | gap 1, opp_overlap 1440079, overlap 1440081 1440080 AAATAAACGTATTTG CTATTGCAGTAGAGGC TAGG GCCTCTACTGCGA-AG TCACTTTAGCTAGAG Ssed_1210 1440846 - 1440127 - | SapC family protein TERM 1427 1440590 - 1440639 + g 82 -5.2 -5.09225 | opp_overlap 1440602 TTACTGAATCCTAGT GGTGTTACACCAGTG-CGCCAAGA GCTG TCTTGGCAATACAGGT-TAATACC TTTTTTGACTCCCAT TERM 1428 1441280 - 1441317 + H 100 -10.7 -5.95539 | gap 1 CAGAAACTAGTATTG GCCAGGTGT-TACACTCA GAT TGAGAATATACACCTGGC TTTTTTTCTTTGGGG TERM 1429 1444226 - 1444244 + G 73 -10.4 -3.21218 | CTGATCTACCCTGGG CTCGATAT TGA ATATCGAG TTACTGGTGGGCAGT Ssed_1211 1441694 - 1444360 + | Beta-N-acetylhexosaminidase Ssed_1212 1444582 - 1445478 + | ATPase, BadF/BadG/BcrA/BcrD type Ssed_1213 1445506 - 1446633 + | N-acetylglucosamine-6-phosphate deacetylase TERM 1430 1446664 - 1446688 + F 100 -15 -5.24796 | CTTGAGTTAGTTTAA GCCCCGGCAG AGATG CTGTCGGGGC TTTTTGTTATATAGA Ssed_1214 1446738 - 1447874 + | hypothetical protein TERM 1431 1447954 - 1447965 + F 95 -4.4 -5.75822 | opp_overlap 1447954 TTAAAAGAATGAAAT GACA GCGT TGTC TTTTTTTGGTTTCTG Ssed_1215 1448119 - 1449423 + | glucose/galactose transporter TERM 1432 1449475 - 1449491 + F 100 -10.1 -5.3236 | opp_overlap 1449473 1449471 1449475 TGGCAGTTAAATAGA GGAGCCT TCA GGGCTCC TTTTTTATAGCTTAT TERM 1433 1449491 - 1449475 - f 75 -9.4 -3.27408 | opp_overlap 1449475, overlap 1449473 1449471 TGGCAGTTAAATAGA GGAGCC TTCAG GGCTCC TTTTTTATAGCTTAT TERM 1434 1449717 - 1449700 - f 93 -7 -5.4251 | opp_overlap 1449700 TTCAGATACAAAAAA GCCACT AATTAA AGTGGC TTATTGCTCTTCATA TERM 1435 1449891 - 1449907 + F 70 -9.5 -2.62616 | opp_overlap 1449893, overlap 1449893 TCGAACCAGGGACAC GAGGATT TTC AATCCTC TGCTCTACCGACTGA TERM 1436 1450441 - 1450424 - f 93 -7 -5.4251 | opp_overlap 1450424 CTCAGATACAAAAAA GCCACT AATTAA AGTGGC TTATTGCTCTTCATA TERM 1437 1450577 - 1450560 - f 93 -7 -5.43414 | opp_overlap 1450560 AGCAGATACAAAAAA GCCACT AATTAA AGTGGC TTATTGCTCTTCATA TERM 1438 1450751 - 1450767 + F 70 -9.5 -2.62616 | opp_overlap 1450753, overlap 1450753 TCGAACCAGGGACAC GAGGATT TTC AATCCTC TGCTCTACCGACTGA Ssed_1216 1451197 - 1451748 + | cytochrome b561 Ssed_1217 1451830 - 1452408 + | hypothetical protein TERM 1439 1452478 - 1452451 - T 81 -11.4 -3.06796 | opp_overlap 1452451 1452458, overlap 1452458 CTCCAGTTTATCTAA TAAAAAAGCGCC TTAC GGCGCTTTTTTG TGTCTGGAACACTTA TERM 1440 1452451 - 1452478 + T 91 -13.6 -2.87881 | opp_overlap 1452451 1452458, overlap 1452458 CTCCAGTTTATCTAA TAAAAAAGCGCC TTAC GGCGCTTTTTTG TGTCTGGAACACTTA TERM 1441 1452471 - 1452458 - T 100 -9.5 -5.4833 | opp_overlap 1452458 1452451, overlap 1452451 TTATCTAATAAAAAA GCGCC TTAC GGCGC TTTTTTGTGTCTGGA TERM 1442 1452458 - 1452471 + T 100 -9.5 -5.4251 | opp_overlap 1452451 1452458, overlap 1452451 TTATCTAATAAAAAA GCGCC TTAC GGCGC TTTTTTGTGTCTGGA Ssed_1218 1452842 - 1452564 - | hypothetical protein Ssed_1219 1453957 - 1452845 - | A/G-specific adenine glycosylase TERM 1443 1453417 - 1453433 + g 71 -2.9 -5.00616 | overlap 1453419 CGGTTAACTCCCAGA GTCTGTT TTC GACAGTC TTTTTTCCCGGCCAA Ssed_1220 1454173 - 1454889 + | tRNA (guanine-N(7))-methyltransferase Ssed_1221 1454959 - 1455282 + | hypothetical protein Ssed_1222 1455282 - 1456196 + | glutaminase TERM 1444 1456244 - 1456256 + F 71 -4.8 -4.52345 | opp_overlap 1456228 GGTATTAGTAAATTG GCCA AAAAC TGGC TTTATTTACTAATAT Ssed_1223 1456441 - 1457274 + | hypothetical protein TERM 1445 1457330 - 1457348 + F 100 -8.2 -6.07969 | CTTATTGCAACAGGC CCGTATTT TCT GAATACGG TTTTTTTTCGTTTTG Ssed_1224 1457703 - 1458644 + | carbonate dehydratase TERM 1446 1458754 - 1458778 + T 100 -7.1 -6.09196 | opp_overlap 1458754 TGTAAAAGATGATAA GCCTCACCT TATAACT GGGTGGGGC TTTTTTTGTTTTAAA TERM 1447 1459068 - 1459089 + T 100 -14.5 -5.30616 | TCCTAGTTTTGGTTT TACCCCGGT TTTT ACCGGGGTA TTTTTCTTTAAGTGA TERM 1448 1459129 - 1459151 + T 100 -16.4 -5.79595 | GACGGTTTTTATTTA GCCAGTTGGA ATA TCCAACTGGC TTTTTTATTTTCAGA Ssed_1225 1461013 - 1459172 - | hypothetical protein TERM 1449 1460423 - 1460434 + g 75 -5.8 -4.56775 | AAATACGAAGCGTGG GGCA ATAA TGCC TTTTTCCGCCCGGAT Ssed_1226 1462295 - 1461159 - | coproporphyrinogen dehydrogenase Ssed_1227 1463040 - 1462438 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 1450 1463185 - 1463166 - R 90 -10.8 -4.14627 | opp_overlap 1463169, overlap 1463169 GGGGGAGATAAAGAA TAACCTCC CGCA GGAGGTTA TTGAAAGCAGTAATC TERM 1451 1463169 - 1463182 + r 70 -8.1 -3.61715 | opp_overlap 1463166 1463169 GGAGATAAAGAATAA CCTCC CGCA GGAGG TTATTGAAAGCAGTA TERM 1452 1463182 - 1463169 - R 77 -8.1 -4.18983 | opp_overlap 1463169, overlap 1463166 GGAGATAAAGAATAA CCTCC CGCA GGAGG TTATTGAAAGCAGTA Ssed_1228 1463674 - 1463240 - | hypothetical protein Ssed_1229 1464064 - 1463777 - | hypothetical protein TERM 1453 1464047 - 1464028 - G 91 -13.6 -3.37727 | opp_overlap 1464031 GAATATAGAGATTAA GCAGCAGG TCAT CCTGCTGC TTAGAGACGGGAAGC Ssed_1230 1464612 - 1464064 - | protein of unknown function YGGT Ssed_1231 1465475 - 1464657 - | pyrroline-5-carboxylate reductase Ssed_1232 1466313 - 1465609 - | alanine racemase domain-containing protein TERM 1454 1466682 - 1466709 + G 71 -9.2 -3.5764 | opp_overlap 1466674, overlap 1466674 TGAGCAACTCGGCGC GCCGGAGATTTT TAAG AAGATCTCCAGC TTTCCCCGTGGGCTT TERM 1455 1466796 - 1466810 + G 70 -10 -3.22475 | opp_overlap 1466793 1466796, overlap 1466794 CGATTATATAAACGA TGCTCG TCA CGAGCA TATTCTGACCATCGA Ssed_1233 1466350 - 1467384 + | twitching motility protein PilT Ssed_1234 1467411 - 1468523 + | twitching motility protein TERM 1456 1468559 - 1468578 + F 90 -7.1 -5.28778 | opp_overlap 1468559 TCTTAAGTTAAAAAA CCAGCGT TGCTAT GCGCTGG TTTTTTATGCATGGT TERM 1457 1468578 - 1468559 - f 83 -6.4 -5.15969 | opp_overlap 1468559 TCTTAAGTTAAAAAA CCAGCG TTGCTATG CGCTGG TTTTTTATGCATGGT TERM 1458 1469806 - 1469784 - g 85 -7.6 -4.66987 | opp_overlap 1469773, overlap 1469773 GATAGCCGAAGAAAA CCGGCTCATC TTC GAAGAGGCGG GTGGACAGAAATATC Ssed_1235 1468858 - 1469895 + | ferrochelatase TERM 1459 1469920 - 1469937 + T 81 -6.9 -4.72272 | opp_overlap 1469921, overlap 1469921 AATGTGTATTAACAA AGGGAGC TTAG GCTCCCA TTTTTAATGCCAACG TERM 1460 1469936 - 1469921 - T 89 -10.4 -4.2461 | opp_overlap 1469920 1469921 ATGTGTATTAACAAA GGGAGC TTAG GCTCCC ATTTTTAATGCCAAC TERM 1461 1469921 - 1469936 + T 77 -10.4 -3.43042 | opp_overlap 1469921, overlap 1469920 ATGTGTATTAACAAA GGGAGC TTAG GCTCCC ATTTTTAATGCCAAC Ssed_1236 1470383 - 1469964 - | Holliday junction resolvase-like protein Ssed_1237 1471028 - 1470468 - | hypothetical protein Ssed_1238 1471404 - 1471075 - | translation initiation factor Sui1 TERM 1462 1471825 - 1471809 - R 100 -8 -6.02919 | GTAGAAATAAAAAAA GACCAC ACACG GTGGTC AATAAACTGTTATCT Ssed_1239 1472255 - 1471938 - | hypothetical protein Ssed_1240 1472427 - 1472987 + | hypothetical protein TERM 1463 1473027 - 1473051 + F 93 -7.9 -5.36965 | opp_overlap 1473027 TCGGTATAATATAAA GGTGAGCATAG TTA TTATGTTCGCC TTTTTTCTACTCTTG TERM 1464 1473117 - 1473131 + F 71 -7.2 -3.85817 | opp_overlap 1473117 TTCTTGGGCAAATGA CTCTTA AAA TAAGAG TTTATAAAAACAGCT Ssed_1241 1473325 - 1473828 + | hypothetical protein TERM 1465 1473899 - 1473875 - T 93 -10.1 -4.84529 | opp_overlap 1473875 GTATAAACTTAAAAA GCTTGAGTG TATGTCG CACTCAAGC TTTTTTATTTTGCCC TERM 1466 1473875 - 1473899 + T 100 -10.8 -5.79595 | opp_overlap 1473875 GTATAAACTTAAAAA GCTTGAGTGT ATGTC GCACTCAAGC TTTTTTATTTTGCCC Ssed_1242 1474838 - 1473960 - | LysR family transcriptional regulator Ssed_1243 1474923 - 1475333 + | hypothetical protein Ssed_1244 1475606 - 1476175 + | OmpA/MotB domain-containing protein TERM 1467 1476294 - 1476308 + F 77 -8.6 -3.80855 | overlap 1476282 TGAGTTTTGATATGT CCAAAC TGT GTTTGG TTAATTTTTAGGGAG Ssed_1245 1476331 - 1477155 + | MscS mechanosensitive ion channel TERM 1468 1477184 - 1477230 + T 90 -7.5 -5.30616 | gap 1, opp_overlap 1477191 1477195, overlap 1477191 1477195 1477198 TCGGATAAGCGTTAA G-AACAAATAAATAAGGTCGGC ATAT GCCGACCTTATTTATGTCTGGC TTTTTGTTTGAATGC TERM 1469 1477222 - 1477191 - T 100 -19 -4.45068 | opp_overlap 1477184 1477191 1477195 1477198, overlap 1477195 AGCGTTAAGAACAAA TAAATAAGGTCGGC ATAT GCCGACCTTATTTA TGTCTGGCTTTTTGT TERM 1470 1477191 - 1477222 + T 100 -19 -3.03575 | opp_overlap 1477191 1477195, overlap 1477184 1477195 1477198 AGCGTTAAGAACAAA TAAATAAGGTCGGC ATAT GCCGACCTTATTTA TGTCTGGCTTTTTGT TERM 1471 1477195 - 1477218 + T 100 -15.4 -4.15664 | opp_overlap 1477195 1477191, overlap 1477191 1477184 1477198 TTAAGAACAAATAAA TAAGGTCGGC ATAT GCCGACCTTA TTTATGTCTGGCTTT TERM 1472 1477218 - 1477195 - T 100 -15.4 -4.78597 | opp_overlap 1477191 1477184 1477195 1477198, overlap 1477191 TTAAGAACAAATAAA TAAGGTCGGC ATAT GCCGACCTTA TTTATGTCTGGCTTT TERM 1473 1477198 - 1477215 + T 100 -12.7 -4.18674 | opp_overlap 1477195 1477191, overlap 1477195 1477191 1477184 AGAACAAATAAATAA GGTCGGC ATAT GCCGACC TTATTTATGTCTGGC Ssed_1246 1477905 - 1477258 - | hypothetical protein TERM 1474 1477609 - 1477599 - G 71 -8.2 -3.70674 | overlap 1477597 CTATGATGGAAAATA CGGC TAA GCCG AGTGCATCGATAGCC Ssed_1247 1478254 - 1479264 + | threonine aldolase TERM 1475 1479300 - 1479329 + T 90 -10.9 -4.18802 | opp_overlap 1479307, overlap 1479307 CGATGGGTTTTATAT GAAAAAAGTCTGC ATCG GCAGACTTTTTTA TTTTCAGGTCTGTGT TERM 1476 1479307 - 1479322 + T 100 -9 -5.79595 | opp_overlap 1479307, overlap 1479300 TTTTATATGAAAAAA GTCTGC ATCG GCAGAC TTTTTTATTTTCAGG TERM 1477 1479322 - 1479307 - T 93 -9 -5.21709 | opp_overlap 1479307 1479300 TTTTATATGAAAAAA GTCTGC ATCG GCAGAC TTTTTTATTTTCAGG Ssed_1248 1480162 - 1479386 - | hypothetical protein TERM 1478 1480232 - 1480198 - R 91 -8.1 -5.34655 | gap 1, opp_overlap 1480198 GAAGGAAAAATAAAA TCAAGGTCATCAAAAA CTCA TCTTTG-TGACCCTGA TTGACTAAACCATAT Ssed_1249 1481922 - 1480291 - | alkaline phosphatase Ssed_1250 1483430 - 1481940 - | alkaline phosphatase Ssed_1251 1483782 - 1484150 + | thioesterase superfamily protein TERM 1479 1484172 - 1484195 + T 91 -13.9 -2.75535 | ACAAGAATGGGTGAT TCGGCCAGG AACAAA CCTGGCCGA TAATTAAACTGTTAG Ssed_1252 1484422 - 1484207 - | hypothetical protein TERM 1480 1484548 - 1484533 - R 93 -10.4 -5.04601 | opp_overlap 1484541 TTCAGAAATGAAAAA GCCTCC GCTG GGAGGC TCCATGTGATAACTA Ssed_1253 1485883 - 1484582 - | NADH dehydrogenase TERM 1481 1486215 - 1486244 + r 93 -10.2 -4.66537 | gap 1, overlap 1486219 GGTCGGGCTTGAACG TGAA-CTGCCTCA TCAAT TGAGGCAGTTTCA TTTTATATTAAAGGC TERM 1482 1486219 - 1486239 + r 93 -11.2 -4.32571 | overlap 1486215 GGGCTTGAACGTGAA CTGCCTCA TCAAT TGAGGCAG TTTCATTTTATATTA Ssed_1254 1486657 - 1486295 - | hypothetical protein Ssed_1255 1487281 - 1488456 + | RND family efflux transporter MFP subunit TERM 1483 1489577 - 1489594 + G 81 -9.9 -4.01419 | GCTCGACTCTGGTTC CCGGAAT TGCG ATTCCGG TTTCCTTAATTGGTA TERM 1484 1491559 - 1491549 - g 71 -6.8 -4.21194 | TGTGATGATGCAAAA GCTC AGA GAGC GAGTGAAAGGTGAGG Ssed_1256 1488469 - 1491585 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 1485 1491609 - 1491643 + F 75 -10.2 -3.09749 | gap 1, opp_overlap 1491615, overlap 1491615 GATAAACTCAGCTCT G-AAAAAGGCTCACG AATTAC CGTGGGCCTTTTTGC TATATCTTAAACCTA TERM 1486 1491636 - 1491615 - f 82 -7.9 -4.58395 | opp_overlap 1491609 1491615 CTCAGCTCTGAAAAA GGCTCACGA ATTA CCGTGGGCC TTTTTGCTATATCTT TERM 1487 1491615 - 1491636 + F 93 -9.4 -4.87037 | opp_overlap 1491615, overlap 1491609 CTCAGCTCTGAAAAA GGCTCACG AATTAC CGTGGGCC TTTTTGCTATATCTT Ssed_1257 1491913 - 1492125 + | putative cold shock-like protein TERM 1488 1492154 - 1492171 + T 89 -6.9 -5.29782 | opp_overlap 1492154 CAGATCATAATTAAA GGCTGCC TTCG GGTGGCC TTTTTTGTGCCTGTC TERM 1489 1492481 - 1492511 + T 75 -9.7 -3.43944 | opp_overlap 1492481 GGTGGATATGAAAAA GGCCCGTTCACTC ATATA GAGTAAACAGGCC TTCTAGCTTGCTGAT TERM 1490 1492511 - 1492481 - T 100 -14.1 -4.8048 | opp_overlap 1492481 GGTGGATATGAAAAA GGCCCGTTCACTC ATATA GAGTAAACAGGCC TTCTAGCTTGCTGAT TERM 1491 1493014 - 1493037 + T 83 -11 -3.76393 | opp_overlap 1493014 TCGGGCAAAAGAAAA GGCCCATTAC TAAT GAAATGGGCC TTTAGGTTACGCTCT TERM 1492 1493037 - 1493014 - T 93 -11 -5.07652 | opp_overlap 1493014 TCGGGCAAAAGAAAA GGCCCATTAC TAAT GAAATGGGCC TTTAGGTTACGCTCT TERM 1493 1493080 - 1493110 + T 71 -7.6 -3.90048 | overlap 1493079 1493081 GAAAACGAAACGACT TTATTTGCGCCTAT TTT ATCGGCGCAAAGAG TATTTTTACAAAGCG Ssed_1258 1494264 - 1493116 - | iron-containing alcohol dehydrogenase TERM 1494 1494508 - 1494526 + H 70 -8.2 -3.62046 | ATCCATAGGTTAGCG GGAAACAG TGG CTGTTTTC TTGTTGCCAGCATAA Ssed_1259 1494644 - 1495804 + | porin TERM 1495 1495873 - 1495840 - T 100 -15.4 -4.2008 | ACATAGTGTAATAAA GCAGCGGGAAGC AATGAAATGA GCTTCCCGCTGC AGGAGATTGAGGTCA Ssed_1260 1496583 - 1496104 - | YbaK/prolyl-tRNA synthetase associated region TERM 1496 1496390 - 1496414 + g 75 -5.1 -4.75372 | gap 1, overlap 1496395 CCTAAGTTGATCTTA TGATCGGCTG GGAGGA CAGCC-ATCA TTTTTCGTCCCTCAT Ssed_1261 1497211 - 1496732 - | hypothetical protein TERM 1497 1497696 - 1497722 + G 77 -3.8 -5.17353 | gap 1 GCCATTTCGGGACTA GTCTTTATCGC CGAGAA GCGA-GAAGAC TTTTTTGCTGCATAT Ssed_1262 1497399 - 1499039 + | sulfotransferase Ssed_1263 1500230 - 1499112 - | SecC motif-containing protein TERM 1498 1499409 - 1499423 + g 100 -5.7 -5.63103 | opp_overlap 1499409 CCTTAATTGATGATA GAAGG GCCAA CCTTC TTTTTTTGCTTCAAA Ssed_1264 1501336 - 1500326 - | SecC motif-containing protein TERM 1499 1500878 - 1500935 + g 74 -10.7 -3.02684 | gap 1, overlap 1500878 1500880 ATCCCCACCAAAGCC CGGGAGCATAGGGTAGGTACGGA-ATCG GCC CGATCTCCATGCCTGCATTATGCTGCTG ATATTTTCTTTAGGC Ssed_1265 1501965 - 1501531 - | GCN5-related N-acetyltransferase Ssed_1266 1502284 - 1503399 + | RND family efflux transporter MFP subunit TERM 1500 1503799 - 1503813 + G 73 -7.8 -4.04206 | opp_overlap 1503795 1503794, overlap 1503795 CTAAGGATAATGGCT CCGGAG AGC CTTCGG TTTATATCAACCTAA Ssed_1267 1503399 - 1506506 + | acriflavin resistance protein Ssed_1268 1506638 - 1507108 + | hypothetical protein Ssed_1269 1508217 - 1507120 - | metallophosphoesterase TERM 1501 1508451 - 1508432 - R 100 -10.8 -5.4251 | opp_overlap 1508432 TCCAGACATAAAAAA GCGAAAAC CTAG GTTTTCGC TTTTTTTAAGGACTC TERM 1502 1508432 - 1508451 + r 100 -10.8 -5.41143 | opp_overlap 1508432 TCCAGACATAAAAAA GCGAAAAC CTAG GTTTTCGC TTTTTTTAAGGACTC Ssed_1270 1510188 - 1508521 - | putative ABC transporter ATP-binding protein TERM 1503 1510665 - 1510643 - H 79 -10.6 -3.15544 | TGGGATTGTGATCAA TTGCGCTGTA GAA TACCGCGCAA CCCTACTATAAGAAT TERM 1504 1510724 - 1510713 - g 74 -3 -5.055 | overlap 1510723 TTAATGCTGAAAAAA GATA TGAA TATC GCGGACTTTGATCCA TERM 1505 1511467 - 1511456 - g 81 -5.8 -4.88067 | opp_overlap 1511455 AGCTATTTATAAAAA GCTG AACT CAGC CGTTTTCCCTGGTGG TERM 1506 1511644 - 1511657 + G 70 -2.4 -4.95957 | overlap 1511636 1511637 TCGTTTCTGGTGGTA CAGA CAACCA TCTG TTTTTACTTGATTTG Ssed_1271 1510701 - 1511957 + | glycine hydroxymethyltransferase TERM 1507 1511987 - 1512006 + F 100 -13.6 -4.96848 | opp_overlap 1511981 TCAGGTAAACTTCAA TGGCCGCT ATTT AGCGGCCA TTTTTGTGTCAGGAG Ssed_1272 1512113 - 1512562 + | transcriptional regulator NrdR Ssed_1273 1512628 - 1513752 + | diaminohydroxyphosphoribosylaminopyrimidine deaminase Ssed_1274 1513757 - 1514419 + | riboflavin synthase subunit alpha TERM 1508 1515371 - 1515353 - g 71 -7.4 -4.13767 | CTGGCCACTCGAAAA GGCAATGC AAC GTATTGCC GATGATGGTGGTGTA Ssed_1275 1514529 - 1515632 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1509 1515825 - 1515813 - g 71 -6.3 -4.21607 | TTTAGGTAAGATAAA TGAAC GTA GTTCA AGGTAATATCGAGTC TERM 1510 1516061 - 1516077 + G 71 -4.3 -4.78029 | overlap 1516062 CTGGGTGCAGTTATC CGTGGTG GTA CGCCACA TTTTGATTTTGTTGC TERM 1511 1516116 - 1516132 + G 70 -9.5 -3.21464 | overlap 1516109 GTAACAAAGGTTTAG CTCAAGT CGC ACTTGAG TTCGATCTTCCTGTT Ssed_1276 1515812 - 1516294 + | riboflavin synthase Ssed_1277 1516303 - 1516707 + | transcription antitermination protein NusB TERM 1512 1516718 - 1516735 + F 100 -11.3 -6.15536 | opp_overlap 1516718 AGTAATACAAGATAA CGGCATC CCAG GATGCCG TTTTTTTTGTTCATT TERM 1513 1516735 - 1516718 - f 90 -11.3 -3.84523 | opp_overlap 1516718 AGTAATACAAGATAA CGGCATC CCAG GATGCCG TTTTTTTTGTTCATT Ssed_1278 1516823 - 1517782 + | thiamine-phosphate kinase TERM 1514 1517870 - 1517911 + G 70 -9.5 -3.24245 | gap 1, overlap 1517866 GTTTTGGTTCTGGCC TGGCAGCTAAGGCTCCCGGG ACT TTTGGCA-CCTTGGCTGCCA TTCCCTTGTACCTAA TERM 1515 1517956 - 1517987 + G 85 -5.8 -5.07275 | AGCTTGCCTTGGTAT CTGGCGCTAACACT TTTG AGTGTGATTGCCGG TTTTTATATCTGTGA Ssed_1279 1517782 - 1518276 + | phosphatidylglycerophosphatase TERM 1516 1518294 - 1518328 + F 76 -7.2 -4.1964 | overlap 1518298 ACTTCAATATTATCG ATACTTATGGCACTCG ATA TGAGTGCCATAATTGA TTTTGACATCTTCAG TERM 1517 1518298 - 1518324 + F 100 -14.6 -3.68767 | overlap 1518294 CAATATTATCGATAC TTATGGCACTCG ATA TGAGTGCCATAA TTGATTTTGACATCT TERM 1518 1519769 - 1519751 - g 77 -8.8 -4.20516 | opp_overlap 1519758 TGCTTACCGAACAAA CCACCTGT TTC ACCGGTGG TGAGATGATTAATGT Ssed_1280 1518661 - 1519869 + | methylase involved in ubiquinone/menaquinone biosynthesis-like protein TERM 1519 1519894 - 1519921 + T 85 -12.8 -3.17194 | opp_overlap 1519894 1519898, overlap 1519898 CCAGTCTGTATTAGA GGAAGGTCGACA GAAA TGTCTACCTTCC TTAACTTGAGCAGCT TERM 1520 1519921 - 1519894 - T 83 -12.8 -2.78816 | opp_overlap 1519894 1519898, overlap 1519898 CCAGTCTGTATTAGA GGAAGGTCGACA GAAA TGTCTACCTTCC TTAACTTGAGCAGCT Ssed_1281 1521651 - 1519990 - | recombination and repair protein TERM 1521 1520552 - 1520562 + g 87 -5.4 -5.47218 | overlap 1520549 GCATAACGGATGCGG CTCA GGC TGAG TTTTTTTGCATGAGC Ssed_1282 1522715 - 1521747 - | auxin efflux carrier TERM 1522 1521993 - 1522014 + g 78 -5.2 -4.90302 | TTTGCAGAGGTTAAT CCAGCTTA ATTCCA TAAGTTGG TTTATTTTGTTGGTG Ssed_1283 1523109 - 1522858 - | hypothetical protein Ssed_1284 1524004 - 1523399 - | hypothetical protein Ssed_1285 1526792 - 1523979 - | hybrid sensory histidine kinase BarA TERM 1523 1525584 - 1525607 + gH 73 -5.4 -4.62336 | GGGGACGTCAGACTC GATATCGA CAACAAGC TCGATATC TTTTTCGCGTGCGCT TERM 1524 1527487 - 1527477 - g 83 -8.2 -4.56775 | opp_overlap 1527477 1527476 1527474 ACTTTCGGGTAAAAA GGCC CTG GGCC ATCTTGAGTTAATTG TERM 1525 1527587 - 1527571 - g 83 -2.2 -5.54264 | overlap 1527572 AAAGATGCAAAAAAA CTCACG GCCTT CGCGAA TGAGAAAAGCATCAG Ssed_1286 1526890 - 1528218 + | 23S rRNA 5-methyluridine methyltransferase Ssed_1287 1528439 - 1530646 + | GTP diphosphokinase TERM 1526 1530689 - 1530716 + F 82 -7.8 -4.59853 | opp_overlap 1530689 1530694, overlap 1530694 TCAGTTCATACAAGA TAAAATGACGGC TTAG GTCGTCATTTTC TTTTTACAACATTCA TERM 1527 1530694 - 1530711 + F 91 -7.7 -5.26119 | opp_overlap 1530689 1530694, overlap 1530689 TCATACAAGATAAAA TGACGGC TTAG GTCGTCA TTTTCTTTTTACAAC TERM 1528 1530711 - 1530694 - f 75 -5.5 -4.76963 | opp_overlap 1530694 1530689, overlap 1530689 TCATACAAGATAAAA TGACGGC TTAG GTCGTCA TTTTCTTTTTACAAC Ssed_1288 1530746 - 1531537 + | nucleoside triphosphate pyrophosphohydrolase Ssed_1289 1531660 - 1533297 + | CTP synthetase TERM 1529 1533309 - 1533335 + F 100 -15.9 -5.77571 | opp_overlap 1533304 1533303 CTAAACCAATTTGAA GGCCGCTTCCG TTAAC TGGAAGCGGCC TTTTTGTTTTTTGGT TERM 1530 1533360 - 1533372 + F 74 -4.1 -5.14698 | overlap 1533355 TTTGGTAATGTAAAT TTTGG TGA CCAGA TTTTATTTTAACTTT TERM 1531 1533524 - 1533537 + G 73 -9.5 -3.31792 | AACGGTATGGCTGCA GCGCC ATCT GGCGC TTCTACCGGTAGTCG Ssed_1290 1533416 - 1534711 + | phosphopyruvate hydratase TERM 1532 1534842 - 1534859 + F 100 -9.1 -5.5353 | opp_overlap 1534842 TGTGAAAATTGAAAA GGTCACC ATTA GGTGGCC TTTTTTGTTACTATC TERM 1533 1534859 - 1534842 - f 76 -6.9 -4.4267 | opp_overlap 1534842 TGTGAAAATTGAAAA GGTCACC ATTA GGTGGCC TTTTTTGTTACTATC Ssed_1291 1534919 - 1535218 + | septum formation initiator Ssed_1292 1535266 - 1535970 + | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase Ssed_1293 1536056 - 1536541 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Ssed_1294 1536606 - 1537676 + | pseudouridylate synthase Ssed_1295 1537737 - 1538486 + | 3'-nucleotidase Ssed_1296 1538483 - 1539118 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase Ssed_1297 1539159 - 1540073 + | peptidase M23B Ssed_1298 1540150 - 1541121 + | RpoD family RNA polymerase sigma factor TERM 1534 1541289 - 1541325 + T 100 -14.8 -3.59979 | gap 1, opp_overlap 1541292 1541293 1541299, overlap 1541293 1541299 ATCAGGCATTCAGGA TAACTAAAAAGCGCACA TTTA TGTGCGCTTTTT-GTTA TTTGAAATACAACCA TERM 1535 1541322 - 1541292 - T 86 -12.1 -3.42699 | gap 1, opp_overlap 1541289 1541293 1541299, overlap 1541293 1541299 AGGCATTCAGGATAA CTAAAAAGCGCACA TTTA TGTGCGCTTTTT-G TTATTTGAAATACAA TERM 1536 1541293 - 1541322 + T 100 -14.5 -3.9392 | opp_overlap 1541292 1541293 1541299, overlap 1541289 1541299 GGCATTCAGGATAAC TAAAAAGCGCACA TTTA TGTGCGCTTTTTG TTATTTGAAATACAA TERM 1537 1541322 - 1541293 - T 83 -12.3 -2.65298 | opp_overlap 1541293 1541289 1541299, overlap 1541292 1541299 GGCATTCAGGATAAC TAAAAAGCGCACA TTTA TGTGCGCTTTTTG TTATTTGAAATACAA TERM 1538 1541299 - 1541316 + T 100 -11.3 -5.38549 | opp_overlap 1541292 1541293 1541299, overlap 1541293 1541289 CAGGATAACTAAAAA GCGCACA TTTA TGTGCGC TTTTTGTTATTTGAA TERM 1539 1541316 - 1541299 - T 95 -11.3 -4.94972 | opp_overlap 1541299 1541293 1541289, overlap 1541292 1541293 CAGGATAACTAAAAA GCGCACA TTTA TGTGCGC TTTTTGTTATTTGAA Ssed_1299 1543933 - 1541354 - | DNA mismatch repair protein TERM 1540 1544911 - 1544899 - g 71 -9.1 -3.60792 | opp_overlap 1544896 TCGGTAATCCTGAAA CCACC ACG GGTGG TAATGCGTTGAAGTT Ssed_1300 1544274 - 1545335 + | recombinase A TERM 1541 1545403 - 1545430 + T 100 -14.2 -5.53288 | gap 1, opp_overlap 1545401 ATTCGGCACACTATT TCGCGGTGGCGCA ACT TGCGC-GCCGCGA TTTTTTTGCGTTGAA Ssed_1301 1546142 - 1545549 - | transposase IS116/IS110/IS902 family protein Ssed_1302 1546964 - 1546512 - | hypothetical protein Ssed_1303 1547723 - 1547418 - | hypothetical protein Ssed_1304 1548124 - 1547738 - | NIPSNAP family protein TERM 1542 1547807 - 1547784 - G 71 -9 -3.48276 | opp_overlap 1547784, overlap 1547788 GTGCCCTCGACAGAA CGAAGAAAAC TACG ATTTTCTTCG ATAATGAATTCTCCC TERM 1543 1548345 - 1548356 + H 70 -3 -5.06414 | opp_overlap 1548345 1548355 GATGAGGCCAAATAG TGAT AAAT ATCA TTTTTGTTAAAAAAA TERM 1544 1548673 - 1548683 + H 70 -3.2 -4.88918 | ACACAGAGAAAAAGA GATG AGA CGTC TTTTATTTAAACTAC Ssed_1305 1548674 - 1549606 + | cytochrome c family protein Ssed_1306 1549618 - 1551636 + | outer membrane protein TERM 1545 1553290 - 1553278 - g 73 -5.5 -4.63486 | ACTTTGCGAACAAAA CCTAC TAT GCAGG TGCCGTGAGCTACAT Ssed_1307 1551660 - 1554149 + | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein Ssed_1308 1554164 - 1554799 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1546 1554808 - 1554829 + F 90 -11.6 -4.10657 | opp_overlap 1554807 1554806 1554804 GGTCTAACCAATATC TGCCGGGA GATTCA TCCCGGCA TTTTAAAGAGTATAA Ssed_1309 1554850 - 1555464 + | cytoplasmic chaperone TorD family protein Ssed_1310 1555464 - 1556195 + | uncharacterized endonuclease III related protein TERM 1547 1556240 - 1556265 + T 72 -3.3 -5.07652 | opp_overlap 1556227 1556240, overlap 1556235 AGCCCTATTGCAAAA TGCCAACTT AATTTGAA AAGGTGGCA TTTTATTTTAGGGGG Ssed_1311 1557100 - 1556294 - | transcriptional regulator-like protein TERM 1548 1556965 - 1556977 + g 71 -6.3 -4.16101 | opp_overlap 1556964 CGCGTTTAAATAATT GAACT CCA AGTTC TTTCTCTAATGTTTT Ssed_1312 1557952 - 1557110 - | LysR family transcriptional regulator Ssed_1313 1559180 - 1558317 - | phosphatase Ssed_1314 1560048 - 1559167 - | hypothetical protein TERM 1549 1560176 - 1560153 - R 73 -10.3 -2.87608 | opp_overlap 1560155, overlap 1560152 1560155 1560172 AAACATTTAGGAAAG CAGGGCCTC TAATAT GAGACCCTG TTGAGGGCAATTAAA Ssed_1315 1560951 - 1560187 - | hypothetical protein Ssed_1316 1563545 - 1562334 - | major facilitator superfamily permease TERM 1550 1562822 - 1562783 - G 75 -10.2 -3.43081 | gap 1, opp_overlap 1562783, overlap 1562781 1562815 ATAGAACTGGAAATA GCTCCTTGCTTACATGGAA GAA CTCCATGTAAGCAAAT-GC TGCATTGGTAAGGAA TERM 1551 1563930 - 1563908 - g 93 -7.1 -5.44119 | gap 1 GGCACGGGAAAAAAA TGCTATCAGC TGCC GCTGAT-GCA GAGGAGGCCATCAAT Ssed_1317 1563679 - 1564584 + | LysR family transcriptional regulator Ssed_1318 1565532 - 1568156 + | alanine--tRNA ligase TERM 1552 1568206 - 1568227 + F 100 -14.5 -5.60993 | opp_overlap 1568206 TTTGGCTATTAAAAA GCGCTTCAG GCAT CTGAAGCGC TTTTTTTATGCAGGG TERM 1553 1568227 - 1568206 - f 100 -14.5 -4.72272 | opp_overlap 1568206 TTTGGCTATTAAAAA GCGCTTCAG GCAT CTGAAGCGC TTTTTTTATGCAGGG Ssed_1319 1568610 - 1568807 + | carbon storage regulator, CsrA TERM 1554 1568843 - 1568859 + F 76 -2.2 -5.42514 | TCTTTAAATAGAGAA GTCAGT TTATC GCTGGC TTTTTTGCTTTCTGG TERM 1555 1569901 - 1569879 - f 82 -10.6 -3.47322 | opp_overlap 1569880, overlap 1569880 CGCCATTACAATTAA GCCCGTTGAT GCA ATCAACGGGT TTTTTTGTGGCTTAA TERM 1556 1569900 - 1569880 - f 93 -14.1 -2.68072 | opp_overlap 1569880, overlap 1569879 GCCATTACAATTAAG CCCGTTGAT GCA ATCAACGGG TTTTTTTGTGGCTTA TERM 1557 1569880 - 1569900 + F 100 -14.1 -5.66684 | opp_overlap 1569880 1569879 GCCATTACAATTAAG CCCGTTGAT GCA ATCAACGGG TTTTTTTGTGGCTTA TERM 1558 1571058 - 1571036 - f 83 -10.6 -3.65294 | opp_overlap 1571036, overlap 1571032 TGGTATATAAACCAA GCCCGTTGAT AAT ATCAATGGGC TTTTTTGTACCTATC TERM 1559 1571036 - 1571058 + F 100 -12.8 -5.29782 | opp_overlap 1571036 1571032 TGGTATATAAACCAA GCCCGTTGAT AAT ATCAATGGGC TTTTTTGTACCTATC Ssed_1320 1571449 - 1571745 + | sodium pump decarboxylase, gamma subunit Ssed_1321 1571771 - 1573585 + | pyruvate carboxylase subunit B TERM 1560 1574037 - 1574050 + G 71 -4.5 -4.65916 | overlap 1574025 1574005 TATTGGTGGTGCCGA TGGCC CCAC GGCTA TTTTCTTAGCCTCAA Ssed_1322 1573594 - 1574724 + | glutaconyl-CoA decarboxylase TERM 1561 1574857 - 1574881 + F 95 -4.4 -5.82388 | gap 1, opp_overlap 1574857 GCCCAATTTATTAAA GTCTTGCAGAT TAAT AT-TGCGAGAC TTTTTTTTACGCTTT Ssed_1323 1575172 - 1575357 + | hypothetical protein TERM 1562 1575412 - 1575377 - T 85 -12.8 -3.11088 | opp_overlap 1575379, overlap 1575379 AACTTATCGAATAGA TATGTCACTGGTTTAA ACCT CTAAACCAGTGACATT TGTGTTTTAACCACA TERM 1563 1575410 - 1575379 - T 100 -15.4 -3.11072 | opp_overlap 1575379, overlap 1575377 CTTATCGAATAGATA TGTCACTGGTTTAA ACCT CTAAACCAGTGACA TTTGTGTTTTAACCA TERM 1564 1575379 - 1575410 + T 100 -14.7 -4.45168 | opp_overlap 1575379 1575377 CTTATCGAATAGATA TGTCACTGGTTTA AACCTC TAAACCAGTGACA TTTGTGTTTTAACCA Ssed_1324 1575754 - 1575419 - | SecC motif-containing protein Ssed_1325 1576091 - 1575906 - | hypothetical protein TERM 1565 1576230 - 1576201 - R 100 -13.7 -4.21462 | opp_overlap 1576206, overlap 1576206 AGCTATCAGTTAAAA TAAAACAAGCCGC ATTA GCGGCTTGTTTTG ATATCGCGACAAGGA TERM 1566 1576225 - 1576206 - R 100 -13.6 -5.10933 | opp_overlap 1576206, overlap 1576201 TCAGTTAAAATAAAA CAAGCCGC ATTA GCGGCTTG TTTTGATATCGCGAC TERM 1567 1576206 - 1576225 + r 100 -13.6 -4.34402 | opp_overlap 1576206 1576201 TCAGTTAAAATAAAA CAAGCCGC ATTA GCGGCTTG TTTTGATATCGCGAC Ssed_1326 1577563 - 1576280 - | sodium:dicarboxylate symporter TERM 1568 1578142 - 1578155 + G 74 -3.8 -4.89838 | TCTCTCGTGGACGCC GGTC ATTGGA GACC TTTTGTGTTTATTAG Ssed_1327 1577852 - 1578274 + | hypothetical protein Ssed_1328 1578295 - 1581129 + | peptidase M16 domain-containing protein Ssed_1329 1581345 - 1582979 + | glutamate--cysteine ligase TERM 1569 1583030 - 1583058 + G 100 -16.1 -2.64243 | GCGAGCTTAGCACTT TTATCGGGCTGTG CTT CACAGCCCGACAA TAGTCTGCAGTGTGG Ssed_1330 1582976 - 1583416 + | hypothetical protein Ssed_1331 1583676 - 1584293 + | hypothetical protein TERM 1570 1584328 - 1584346 + T 100 -11.7 -5.12068 | opp_overlap 1584328 GTTCTTTAAGACTAA GCCCCGA ATGAA TCGGGGC TTTTTATTACCTATC TERM 1571 1584346 - 1584328 - T 86 -11.7 -3.36273 | opp_overlap 1584328 GTTCTTTAAGACTAA GCCCCGA ATGAA TCGGGGC TTTTTATTACCTATC Ssed_1332 1585647 - 1584409 - | GGDEF domain-containing protein TERM 1572 1586527 - 1586509 - g 75 -5.9 -4.56597 | CGCCGGTGCTAAAAA CGCGGGT TATTT AGCCGCG CAGATGCTTTCCGTT Ssed_1333 1586138 - 1586647 + | phosphoribosylaminoimidazole carboxylase TERM 1573 1586670 - 1586696 + T 100 -15.2 -5.55769 | opp_overlap 1586670 GAAATGATTAAGTAA CGCCATCGAGTC TTA GGTTCGATGGCG TTTTTTATTGTCGAC TERM 1574 1586696 - 1586670 - T 80 -10.8 -3.44222 | opp_overlap 1586670 GAAATGATTAAGTAA CGCCATCGAGTC TTA GGTTCGATGGCG TTTTTTATTGTCGAC Ssed_1334 1588438 - 1586714 - | putative sulfate transporter YchM Ssed_1335 1588923 - 1589537 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1575 1589792 - 1589775 - g 70 -9.9 -3.18264 | opp_overlap 1589775 CCTGCTACTCATCAA TCCTGAG GCGC CTCAGGA TGTACTGCGTGATGA Ssed_1336 1589527 - 1590249 + | hypothetical protein TERM 1576 1590264 - 1590301 + T 88 -8.6 -4.82667 | gap 1, opp_overlap 1590270, overlap 1590264 1590269 1590270 GCCATTTTTTGACCA GAAAAA-GGCAGCTATC GACCA GGTAGCTGCCGTTTTAC TTTTTCATGTAATGG TERM 1577 1590264 - 1590300 + T 72 -8.8 -3.48877 | opp_overlap 1590270, overlap 1590264 1590269 1590270 GCCATTTTTTGACCA GAAAAAGGCAGCTATC GACCA GGTAGCTGCCGTTTTA CTTTTTCATGTAATG TERM 1578 1590269 - 1590295 + T 88 -8.7 -4.80167 | opp_overlap 1590270, overlap 1590264 1590264 1590270 TTTTTGACCAGAAAA AGGCAGCTATC GACCA GGTAGCTGCCG TTTTACTTTTTCATG TERM 1579 1590270 - 1590294 + T 89 -12.2 -3.46474 | opp_overlap 1590270, overlap 1590269 1590264 1590264 TTTTGACCAGAAAAA GGCAGCTATC GACCA GGTAGCTGCC GTTTTACTTTTTCAT TERM 1580 1590294 - 1590270 - T 93 -10 -4.91109 | opp_overlap 1590270 1590269 1590264 1590264 TTTTGACCAGAAAAA GGCAGCTATC GACCA GGTAGCTGCC GTTTTACTTTTTCAT Ssed_1337 1590996 - 1590298 - | hypothetical protein Ssed_1338 1591503 - 1591027 - | hypothetical protein TERM 1581 1591382 - 1591392 + g 91 -4 -5.60993 | ATGTCATCGGGGAGT TTAC CGA GTAA TTTTTTTATGACCGG TERM 1582 1591471 - 1591444 - G 76 -10 -3.78775 | opp_overlap 1591443 1591442 1591446, overlap 1591446 TTGCTCATCACTAAA GAGCTCAATATC TTCA GATATTGAGCTG GATTTACTCATCTCC TERM 1583 1591469 - 1591446 - G 89 -12.6 -3.48024 | opp_overlap 1591446 1591443 1591442, overlap 1591444 GCTCATCACTAAAGA GCTCAATATC TTCA GATATTGAGC TGGATTTACTCATCT TERM 1584 1591446 - 1591469 + g 81 -12.6 -2.69042 | opp_overlap 1591444 1591446, overlap 1591443 1591442 GCTCATCACTAAAGA GCTCAATATC TTCA GATATTGAGC TGGATTTACTCATCT Ssed_1339 1591692 - 1594976 + | peptidase S41 Ssed_1340 1595219 - 1596106 + | hypothetical protein Ssed_1341 1596266 - 1596835 + | putative lipoprotein TERM 1585 1596864 - 1596878 + T 89 -5.6 -5.37043 | opp_overlap 1596864 TCCAGATAATGTAAA GGCGCT GAC GGCGTC TTTTTTGTGTCCCAT TERM 1586 1597605 - 1597621 + T 91 -10.8 -4.40237 | opp_overlap 1597605 TCCTTAATCAAAAAA CGCCGC ATTTA GCGGCG TTTTACTATCTGATA TERM 1587 1597621 - 1597605 - T 100 -10.8 -5.26875 | opp_overlap 1597605 TCCTTAATCAAAAAA CGCCGC ATTTA GCGGCG TTTTACTATCTGATA Ssed_1342 1598136 - 1597648 - | hypothetical protein Ssed_1343 1598618 - 1598277 - | hypothetical protein Ssed_1344 1600293 - 1598623 - | PepSY-associated TM helix domain-containing protein Ssed_1345 1600596 - 1600297 - | hypothetical protein TERM 1588 1600903 - 1600874 - H 70 -8.9 -3.16564 | gap 1, opp_overlap 1600881, overlap 1600881 CGGTCATCCGAGTAA TA-AAAAAGCATCA ATT TGATGCTTTTTATA ACGATTATCTTAGTT TERM 1589 1600881 - 1600895 + H 90 -8.6 -4.8543 | opp_overlap 1600874 1600881 CCGAGTAATAAAAAA GCATCA ATT TGATGC TTTTTATAACGATTA TERM 1590 1600895 - 1600881 - H 95 -8.6 -5.5112 | opp_overlap 1600881, overlap 1600874 CCGAGTAATAAAAAA GCATCA ATT TGATGC TTTTTATAACGATTA TERM 1591 1601510 - 1601492 - g 100 -11 -4.614 | opp_overlap 1601492 CTTAAGCACAGAAAA GGTCAGCT AAA AGCCGACC TTCATGAGAAGCCTG Ssed_1346 1601225 - 1601581 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 1592 1601676 - 1601643 - T 82 -11.2 -3.10597 | opp_overlap 1601651, overlap 1601651 TCCTTGATGTAAAAG TTAAAAAACCACCG CTCAGT CGGTGGTTTTTTTA TGGAAGGAATAATGA TERM 1593 1601651 - 1601668 + T 100 -8.4 -5.60993 | opp_overlap 1601643 1601651 GTAAAAGTTAAAAAA CCACCG CTCAGT CGGTGG TTTTTTTATGGAAGG TERM 1594 1601668 - 1601651 - T 93 -8.4 -5.2696 | opp_overlap 1601651, overlap 1601643 GTAAAAGTTAAAAAA CCACCG CTCAGT CGGTGG TTTTTTTATGGAAGG Ssed_1347 1603633 - 1601711 - | glutathione-regulated potassium-efflux system protein KefC TERM 1595 1602339 - 1602353 + g 75 -11.4 -2.50113 | overlap 1602338 AAACGATTCACCATC TGGCCG AAG CGGCCA ATTCCTGCGATGATC TERM 1596 1602603 - 1602614 + g 81 -5.8 -4.93968 | opp_overlap 1602603 1602602 CTCAGGGCAAACAAC CAGC GATC GCTG TTTTTAATTCTGAAT Ssed_1348 1604278 - 1603661 - | putative NAD(P)H oxidoreductase Ssed_1349 1604797 - 1605375 + | putative PhnA protein TERM 1597 1605400 - 1605436 + F 75 -10.2 -3.07534 | opp_overlap 1605404, overlap 1605404 1605416 ATACTCGATTGACTT TAAAGCCGCCGTTATC TCACC GATTTCGGTGGCTTTA TCATTTCTGTCGCTT TERM 1598 1605404 - 1605432 + F 73 -6.6 -4.19307 | opp_overlap 1605404, overlap 1605400 1605416 TCGATTGACTTTAAA GCCGCCGTTATC TCACC GATTTCGGTGGC TTTATCATTTCTGTC Ssed_1350 1605517 - 1605969 + | hypothetical protein TERM 1599 1606361 - 1606347 - f 70 -8.6 -3.29211 | opp_overlap 1606344 1606357 CAAGCTTAAACTTAA GTTTGG TAT CCAAAC AAATGTTTGTTTGGC Ssed_1351 1606364 - 1607488 + | ribokinase-like domain-containing protein TERM 1600 1608366 - 1608354 - g 71 -9.1 -3.61398 | overlap 1608328 GCTTGTGTTTAACAA CGCCA AGT TGGCG GCCGGAATTGCTGTT Ssed_1352 1607482 - 1608396 + | indigoidine synthase A family protein TERM 1601 1608407 - 1608423 + F 82 -3.7 -5.40072 | opp_overlap 1608407 AGTAAGTAGCAAAAT GTCTG TTTAATT CAGAC TTTTTTTGCAAAAGA TERM 1602 1608462 - 1608437 - f 73 -7.5 -4.07687 | opp_overlap 1608442, overlap 1608442 ACTTTTTTTGCAAAA GAGAAGGCGCC TGAG GGCGCCTTTTT TCTGCTCAGTTTTTG TERM 1603 1608457 - 1608442 - f 91 -11.8 -3.95435 | opp_overlap 1608442, overlap 1608437 TTTTGCAAAAGAGAA GGCGCC TGAG GGCGCC TTTTTTCTGCTCAGT TERM 1604 1608442 - 1608457 + F 100 -11.8 -5.31877 | opp_overlap 1608437 1608442 TTTTGCAAAAGAGAA GGCGCC TGAG GGCGCC TTTTTTCTGCTCAGT Ssed_1353 1608663 - 1609946 + | excitatory amino acid transporter Ssed_1354 1611102 - 1609996 - | GGDEF family protein Ssed_1355 1611453 - 1612682 + | sodium-glutamate symporter TERM 1605 1612773 - 1612739 - T 100 -15.2 -3.93673 | overlap 1612740 TAAAGACTTGATAAA TGGTGATATCGATAAC ATA GCTATCGATATCACCT TGAGCCCTGCCGTCA TERM 1606 1612772 - 1612740 - T 100 -18.7 -2.95481 | overlap 1612739 AAAGACTTGATAAAT GGTGATATCGATAAC ATA GCTATCGATATCACC TTGAGCCCTGCCGTC Ssed_1356 1613317 - 1612796 - | putative MutT/NUDIX family protein Ssed_1357 1614220 - 1613501 - | hypothetical protein Ssed_1358 1614823 - 1614497 - | hypothetical protein Ssed_1359 1615280 - 1615041 - | hypothetical protein Ssed_1360 1615537 - 1616283 + | hypothetical protein Ssed_1361 1616472 - 1616651 + | hypothetical protein Ssed_1362 1617881 - 1617225 - | anti-ECFsigma factor, ChrR TERM 1607 1617835 - 1617850 + g 78 -9 -4.08767 | CAATCTAAGGTGTTT GAGTCG AGCA CGACTC TTTTAGAAAAATCCA Ssed_1363 1618732 - 1617941 - | short chain dehydrogenase/reductase family oxidoreductase Ssed_1364 1618971 - 1619252 + | hypothetical protein Ssed_1365 1619348 - 1619650 + | hypothetical protein Ssed_1366 1620046 - 1621035 + | diguanylate cyclase with PAS/PAC sensor TERM 1608 1621251 - 1621233 - T 100 -10.2 -5.78622 | CTATCCGAAAAAAAA GGGCGGGT ATT AACCGCCC AAAGACAAGGTTCGT Ssed_1367 1621907 - 1621320 - | putative lipoprotein Ssed_1368 1624074 - 1621933 - | hypothetical protein TERM 1609 1622516 - 1622530 + g 88 -8.6 -4.90525 | GCAACGTCATCTATA CTCCAT TCG ATGGAG TTTTCTTTAACCTTG Ssed_1369 1625023 - 1624379 - | hypothetical protein Ssed_1370 1625251 - 1626531 + | hypothetical protein TERM 1610 1626939 - 1626917 - f 93 -13.5 -3.13403 | opp_overlap 1626910, overlap 1626915 TCCCGGCTATTAACA GGAGAGAGG TCAAT CCTCTCTCC ACCTAAATAATCTTG Ssed_1371 1626985 - 1628103 + | hypothetical protein TERM 1611 1629082 - 1629064 - g 73 -8.8 -3.80452 | overlap 1629057 AAAGCATATGAACAA CGTGCTCA AAT TGAGCTCG ATAGGACTAAGATCC Ssed_1372 1628584 - 1629648 + | membrane-fusion protein-like protein Ssed_1373 1629652 - 1632789 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 1612 1632815 - 1632837 + F 100 -15 -4.68645 | TTCTACTTTTATCGA TGCCAATCTG ATT CAGATTGGCA TTTTACTTTTAACTA Ssed_1374 1633027 - 1634235 + | hypothetical protein TERM 1613 1634269 - 1634290 + F 100 -11.6 -5.24796 | opp_overlap 1634269 ACTCGATTCACTCAA GCCCTGGA CACGAT TCCAGGGC TTTTTATTGTCTGAA TERM 1614 1634290 - 1634269 - f 81 -11.6 -3.07935 | opp_overlap 1634269 ACTCGATTCACTCAA GCCCTGGA CACGAT TCCAGGGC TTTTTATTGTCTGAA Ssed_1375 1634524 - 1635318 + | hypothetical protein TERM 1615 1635769 - 1635759 - g 73 -5.4 -4.57569 | GGATCGCCTGAAAAA CCAT TCT ATGG TCGTGGTCAATGGTG Ssed_1376 1635409 - 1636704 + | hypothetical protein TERM 1616 1636695 - 1636723 + T 100 -13.3 -4.12456 | AATTCTTGATGCTGT CGAGCATTAAGCT TCA AGATTAATGCTCG TTTTAAGGATCCTCT TERM 1617 1636733 - 1636757 + T 100 -15.1 -5.7827 | opp_overlap 1636733 TGCTCGTTTTAAGGA TCCTCTGCACT TTG AGTGCAGGGGA TTTTTTATTTCTATT TERM 1618 1636757 - 1636733 - T 90 -12.9 -2.70932 | opp_overlap 1636733 TGCTCGTTTTAAGGA TCCTCTGCACT TTG AGTGCAGGGGA TTTTTTATTTCTATT Ssed_1377 1637909 - 1636884 - | esterase/lipase-like protein TERM 1619 1636984 - 1636968 - G 75 -3.6 -5.17488 | AATATTAAAAGAAAA GGCCTG AAATA CATGCC ACATTCCCTCATAAA Ssed_1378 1638415 - 1639092 + | hypothetical protein TERM 1620 1639126 - 1639141 + F 86 -8.2 -4.93696 | opp_overlap 1639113 1639126 AAGAATAAACGATAA GCGTCC ACTC GGGCGC TTTTTAATATTTACA Ssed_1379 1639214 - 1639507 + | hypothetical protein TERM 1621 1639715 - 1639705 - g 75 -5.4 -4.7629 | TTATCAATTTAAAAA GTGA TGC TCAC CGTTCGGTATTAAAT Ssed_1380 1639581 - 1640153 + | methylation site containing protein TERM 1622 1641015 - 1641003 - g 81 -3.3 -5.47218 | opp_overlap 1641003 TTTTAGTGAAAAAAA CAGTG ATT CGCTG TTTTCGACCAGTGTC TERM 1623 1642613 - 1642594 - g 73 -7.9 -4.07885 | GAGCTGGCGGTAAAA GCCAAGA GTGAGT TCTTGGC CAGTATGAGCCATGA TERM 1624 1642892 - 1642916 + G 79 -10.7 -3.55447 | opp_overlap 1642892, overlap 1642894 AAGATCTTGAACTTA TTCTCGACGTC AAA GGCGTCGAGTA TTCTATGGTCAATGG TERM 1625 1642894 - 1642914 + G 91 -13.3 -3.3517 | opp_overlap 1642892, overlap 1642892 GATCTTGAACTTATT CTCGACGTC AAA GGCGTCGAG TATTCTATGGTCAAT Ssed_1381 1640500 - 1644906 + | Signal transduction histidine kinase-like protein TERM 1626 1645633 - 1645660 + G 70 -7.6 -3.83026 | opp_overlap 1645633 1645632 AATTGAACGATTAAT GCCGGCGGGGAT CCGC ATTACCGCCAGC TTTGGTGTGGCAGAG Ssed_1382 1644899 - 1645807 + | response regulator receiver protein TERM 1627 1646490 - 1646500 + G 77 -4.6 -4.85599 | opp_overlap 1646487 GGCGAGAATTGACAC CGGC TCC GCTG TTTTTGTGGACTGCG Ssed_1383 1645918 - 1647147 + | response regulator Ssed_1384 1648153 - 1647155 - | hypothetical protein Ssed_1385 1648772 - 1648311 - | hypothetical protein TERM 1628 1648940 - 1648916 - H 70 -8.6 -3.28497 | opp_overlap 1648915 1648921, overlap 1648930 CTAGTGCAAATTTAA TTGCGCGCAA TTTAC TTGCTCGCAA GTCATTGGCGTGGTA Ssed_1386 1649064 - 1649486 + | OsmC family protein Ssed_1387 1649570 - 1649956 + | hypothetical protein Ssed_1388 1650208 - 1650735 + | methylation site containing protein TERM 1629 1650848 - 1650865 + T 70 -9.8 -2.5474 | overlap 1650846 TTATTCGCTCATTTA GGGGGG CAAATC CCCCCC ATCTTATCCGTCCAC Ssed_1389 1651445 - 1650888 - | hypothetical protein TERM 1630 1652359 - 1652343 - g 76 -2.2 -5.24989 | CGATATACGAAAAAA CGTGTT ATCTG AACTCG CGACGCTAGAACAAA Ssed_1390 1651894 - 1652442 + | cation antiporter TERM 1631 1652657 - 1652636 - g 73 -7.3 -4.1523 | overlap 1652639 GTCAGTATACACAAA CAACGACTG GAGG CATTCGTTG AGCCGTTCGCTAAGC Ssed_1391 1652429 - 1653412 + | universal stress protein, UspA Ssed_1392 1653419 - 1653697 + | multiple resistance and pH regulation protein F Ssed_1393 1653684 - 1653983 + | putative monovalent cation/H+ antiporter subunit G Ssed_1394 1653971 - 1654294 + | hypothetical protein TERM 1632 1654903 - 1654913 + G 76 -8.2 -4.02108 | GGTATGTTTGTCATG GCCG GTA CGGC TTTACTTCTGATAGA TERM 1633 1654952 - 1654930 - g 77 -10.6 -3.48924 | opp_overlap 1654930 TTACTTCTGATAGAA GGTGGATTCT TAC AGTATCCACC TTCTGTGGCCAGTGA TERM 1634 1654930 - 1654952 + G 77 -10.6 -3.48924 | opp_overlap 1654930 TTACTTCTGATAGAA GGTGGATTCT TAC AGTATCCACC TTCTGTGGCCAGTGA Ssed_1395 1654408 - 1655064 + | hypothetical protein TERM 1635 1655372 - 1655342 - g 73 -2.5 -5.09426 | gap 1, overlap 1655346 1655347 GGCAACCGGAAAAAA TGAAC-TTCCCGAC AGGG GCCGGGAGTGATCA CTGTAAACGGCTGAG Ssed_1396 1655061 - 1655369 + | NADH-ubiquinone oxidoreductase, chain 4L TERM 1636 1656313 - 1656327 + GF 71 -2.8 -4.87318 | TACTCGACGGTATCG CAGCTA GGT TATCTG TTTTTGGCTTTTCCG Ssed_1397 1655341 - 1656846 + | NADH dehydrogenase (quinone) TERM 1637 1658013 - 1658026 + G 80 -4.5 -5.0133 | gap 1, opp_overlap 1658007, overlap 1658002 1658013 1658016 GGTATGATAGGGGCG CC-GCC GCT GGCAGG TTTTTTCAGCAAGTG Ssed_1398 1656843 - 1658339 + | NADH dehydrogenase (quinone) TERM 1638 1659008 - 1659032 + G 90 -14.3 -3.16564 | overlap 1659015 TATGCCTCTGCTCGC CCCGCAACGGC ACT GCTGTTGTGGG TTGGTCCCGTCGCAA Ssed_1399 1658336 - 1659649 + | formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter MnhD subunit-like protein Ssed_1400 1659906 - 1660253 + | hypothetical protein Ssed_1401 1661718 - 1660789 - | AraC-type DNA-binding domain-containing protein Ssed_1402 1662030 - 1662980 + | cytochrome c family protein Ssed_1403 1662995 - 1665001 + | outer membrane protein Ssed_1404 1665016 - 1667388 + | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein Ssed_1405 1667412 - 1668029 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_1406 1668099 - 1668719 + | cytoplasmic chaperone TorD family protein TERM 1639 1668983 - 1669004 + T 70 -8.7 -3.37879 | opp_overlap 1668983 GTAGGTATAAAAAAA GGGCCATCA TTTC TGATAGCCC TTCCTTAGAATTGGT TERM 1640 1669004 - 1668983 - T 100 -10.9 -5.64274 | opp_overlap 1668983 GTAGGTATAAAAAAA GGGCCATCA TTTC TGATAGCCC TTCCTTAGAATTGGT Ssed_1407 1669974 - 1669480 - | SsrA-binding protein Ssed_1408 1670199 - 1670630 + | cyclase/dehydrase TERM 1641 1670787 - 1670799 + F 79 -3.3 -5.40474 | GCAAGTGCTAAAACT CGCCT TTC AGGAG TTTTTTTGGCAGCCT Ssed_1409 1670980 - 1671312 + | hypothetical protein TERM 1642 1671405 - 1671372 - T 86 -11.1 -3.82084 | opp_overlap 1671372 1671373 1671376, overlap 1671373 1671376 CTTCAAGAGTAAGAA TCTAGATCCTAGGTT ATGA AACCTAGGATCTTGC TGGCAATTACCAGAG TERM 1643 1671404 - 1671373 - T 95 -14.6 -2.88768 | opp_overlap 1671373 1671372 1671376, overlap 1671372 1671376 TTCAAGAGTAAGAAT CTAGATCCTAGGTT ATGA AACCTAGGATCTTG CTGGCAATTACCAGA TERM 1644 1671376 - 1671401 + T 100 -14.9 -3.16742 | opp_overlap 1671373 1671372 1671376, overlap 1671373 1671372 AAGAGTAAGAATCTA GATCCTAGGTT ATGA AACCTAGGATC TTGCTGGCAATTACC TERM 1645 1671401 - 1671376 - T 95 -14.9 -2.68544 | opp_overlap 1671373 1671372 1671376, overlap 1671373 1671372 AAGAGTAAGAATCTA GATCCTAGGTT ATGA AACCTAGGATC TTGCTGGCAATTACC Ssed_1410 1671937 - 1671422 - | SmpA/OmlA domain-containing protein TERM 1646 1671882 - 1671865 - G 80 -6.3 -4.7078 | gap 1 TCAACCAGTCAAAAA CGCTACAG GCA CTG-AGCG ATAACGAGAGCGCAG TERM 1647 1672349 - 1672339 - H 81 -2.6 -5.56673 | overlap 1672341 AGTTATAAGAAAAAA TATT TAT AATA AACCCGCCTCGATGG Ssed_1411 1672375 - 1673205 + | uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase Ssed_1412 1673412 - 1673630 + | hypothetical protein TERM 1648 1673706 - 1673679 - f 79 -11.4 -2.57211 | overlap 1673678 1673681 AGTCGCCTTTATAAT CATCACAGCC TTTTCACC GGCTGTGATG GCTATAGACAATGTC TERM 1649 1674082 - 1674068 - g 77 -2.8 -5.31519 | ATACCGAAATAAAAA TCAGCT CCT ATCTGA GATTAGTGAACCTCT Ssed_1413 1673704 - 1675467 + | diguanylate cyclase TERM 1650 1676103 - 1676113 + F 70 -5.4 -4.33907 | GGGGTTTTCTGTGAT TGGT CAT ACCA TTTTCACTCTTTCTG Ssed_1414 1676315 - 1678033 + | malate synthase TERM 1651 1678041 - 1678072 + F 73 -8.8 -3.68073 | gap 1, overlap 1678042 TCGGCTAAGCCACCC TTGATTGAGCCCGAG CGA TTCGGGCTCAA-CAC TTATTACCTAACGTA TERM 1652 1678042 - 1678071 + F 83 -12.3 -2.80522 | gap 1, overlap 1678041 CGGCTAAGCCACCCT TGATTGAGCCCGAG CGA TTCGGGCTCAA-CA CTTATTACCTAACGT Ssed_1415 1678176 - 1679501 + | isocitrate lyase TERM 1653 1679562 - 1679591 + F 95 -11.5 -5.01042 | TTGCAGCCGTTGTCC CCCATGCCGTA CCCCTACA TGCGGCATGGG TTTTTCCTTTCGCTT TERM 1654 1680204 - 1680192 - g 70 -7.7 -3.86202 | opp_overlap 1680203 CTGTATTACAGCAAA GCTAC TCA GTAGC CTGCTGGAGTCTGAA Ssed_1416 1679881 - 1681362 + | putative signal transduction protein TERM 1655 1681391 - 1681421 + T 75 -10.4 -3.11303 | opp_overlap 1681388 1681386, overlap 1681388 1681388 1681393 CACTAACTAATAGCT ATGCCAGATCCCAG GCC TTGGGATCTGGCTC TCCTTTATCTCTTCG TERM 1656 1681393 - 1681419 + T 100 -17.4 -3.10368 | opp_overlap 1681388 1681386, overlap 1681391 1681388 1681388 CTAACTAATAGCTAT GCCAGATCCCAG GCC TTGGGATCTGGC TCTCCTTTATCTCTT Ssed_1417 1681959 - 1681426 - | hypothetical protein Ssed_1418 1682850 - 1682026 - | hypothetical protein Ssed_1419 1684703 - 1682958 - | diguanylate cyclase TERM 1657 1683278 - 1683308 + g 71 -6.8 -4.15106 | TCTTGTTCTGCAATT CAGGCATCGCCTTC ATT GAGGCCGATATCTG TTTTAGACATTGGTC Ssed_1420 1686136 - 1684700 - | extracellular solute-binding protein TERM 1658 1685474 - 1685486 + g 75 -7.7 -4.15453 | TGACATCAGTGTAAG GCCAT AGA ATGGC TTTTCGAGTACCTTA Ssed_1421 1686889 - 1686440 - | CopG family transcriptional regulator Ssed_1422 1687592 - 1686849 - | hypothetical protein TERM 1659 1688135 - 1688186 + H 87 -12.4 -3.28712 | opp_overlap 1688143 1688146, overlap 1688154 TGAAAAGTTGATCTA TACCCAAACGACCTCGAAATGCAG AACT CAGCATTTTGAAGTGGCTTGGGTA TTATAAGAGAGAGAA Ssed_1423 1688204 - 1688428 + | hypothetical protein Ssed_1424 1688573 - 1688875 + | NrfJ-related protein TERM 1660 1688920 - 1688951 + F 83 -6.1 -5.07652 | gap 2, opp_overlap 1688920 TTAAAAGTGGTGAAA TGGTGGCTCGATTAT CTCG ATAATCG--CCACCA TTTTCTTTTGCGCGG Ssed_1425 1689018 - 1689563 + | GCN5-related N-acetyltransferase Ssed_1426 1690088 - 1689639 - | hypothetical protein TERM 1661 1690369 - 1690317 - R 91 -13.5 -2.64274 | opp_overlap 1690323 1690332, overlap 1690313 1690314 1690332 ATGTCTTCAAAGTCA TCGTTCCCGGCTAAAGCCGGTCTTA CGG TAGGAGCGGCTTTAGCCGCGAATCA CACAGAATCTAAACC TERM 1662 1690323 - 1690336 + r 72 -9.5 -3.05844 | opp_overlap 1690317 1690313 1690314 1690332, overlap 1690332 TCAAAGTCATCGTTC CCGGC TAAA GCCGG TCTTACGGTAGGAGC TERM 1663 1690332 - 1690354 + r 72 -8.4 -3.53444 | opp_overlap 1690317 1690313 1690314 1690332, overlap 1690323 TCGTTCCCGGCTAAA GCCGGTCTTA CGG TAGGAGCGGC TTTAGCCGCGAATCA Ssed_1427 1692199 - 1690454 - | 5'-nucleotidase TERM 1664 1692403 - 1692376 - R 77 -10 -3.33092 | opp_overlap 1692381, overlap 1692381 ATATCGACAGAAAAG TAAAAGGGAAAC CTGA GTTTCCCTTTTT TATCGCAACCCTGAC TERM 1665 1692381 - 1692398 + r 100 -9.9 -5.24129 | opp_overlap 1692376 1692381 GACAGAAAAGTAAAA GGGAAAC CTGA GTTTCCC TTTTTTATCGCAACC TERM 1666 1692398 - 1692381 - R 93 -9.9 -4.75518 | opp_overlap 1692381, overlap 1692376 GACAGAAAAGTAAAA GGGAAAC CTGA GTTTCCC TTTTTTATCGCAACC Ssed_1428 1693569 - 1692487 - | hypothetical protein TERM 1667 1694150 - 1694164 + G 77 -6.4 -4.51196 | AATCATCGGTCAGGT TTGGCG AGT TGCCAA TTTTATCGGTTTCCA Ssed_1429 1693728 - 1694849 + | hypothetical protein TERM 1668 1695576 - 1695562 - g 74 -2.8 -5.06414 | CGTTGGGAATAAAAA TTGAGC AAG GCTTAA ATGATCTAGATGCAG Ssed_1430 1694883 - 1695671 + | type IV pilus biogenesis/stability protein PilW Ssed_1431 1695671 - 1696603 + | hypothetical protein Ssed_1432 1696707 - 1697822 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 1669 1697886 - 1697899 + F 74 -5.3 -4.82855 | ATTGTGCCTGTTAAC TGAGT TTAA ACTCA TTTTTACGTTTAGTA Ssed_1433 1697982 - 1699256 + | histidine--tRNA ligase TERM 1670 1699427 - 1699417 - g 76 -8.2 -4.12198 | opp_overlap 1699417 1699426 TACAAGGTGGCAAAA GCCG AGT CGGC TTCTGAAGCATTTCA Ssed_1434 1699270 - 1699890 + | tetratricopeptide TPR_4 TERM 1671 1700246 - 1700228 - g 73 -8.8 -3.9461 | overlap 1700241 TCTTGCTAAGAACAA GGGGGCTA AAT TAGCCTCC GGCGTTACGGCAGCC Ssed_1435 1699902 - 1701089 + | outer membrane protein assembly complex subunit YfgL TERM 1672 1701112 - 1701136 + F 100 -13.6 -4.96646 | CTGAATAGATTTTTA GCCCCTGGAA GTTTG TTCCGGGGGC TTTTTAGTTATATAA TERM 1673 1701232 - 1701245 + G 71 -3.8 -4.79223 | overlap 1701215 1701218 TGGCCGACCTAATGT GGGT AAGTCG ACCC TTTTTAATCGTCTGA TERM 1674 1702262 - 1702274 + G 85 -7.7 -4.72846 | GCGCTTCATGGTACC GGTGT AGG ACACC TTTTTGAATCTGTGC Ssed_1436 1701194 - 1702660 + | GTP-binding protein EngA TERM 1675 1702723 - 1702698 - f 89 -12 -3.50393 | opp_overlap 1702698 GTCTAGTTCATAGAA GGCCAGTTAA TTAAAT TTAACTGGCC TTTTTGTTACCTTCG TERM 1676 1702698 - 1702723 + F 100 -12 -5.13741 | opp_overlap 1702698 GTCTAGTTCATAGAA GGCCAGTTAA TTAAAT TTAACTGGCC TTTTTGTTACCTTCG TERM 1677 1702725 - 1702755 + F 70 -2.7 -5.01811 | gap 1, overlap 1702727 AAATTTAACTGGCCT TTTTGTT-ACCTTC GAAT GAAGGTTAACGACA TTTTTGGTTTGGTAA TERM 1678 1703850 - 1703827 - g 73 -5.3 -4.63932 | TACTGGCCAATAAAA CAACCGC ATCTATTACA GCGGTTG ATAACGAACAGTCTG Ssed_1437 1703214 - 1704386 + | MerR family transcriptional regulator TERM 1679 1704425 - 1704451 + F 84 -10.2 -3.96188 | opp_overlap 1704418 1704425 GAATCAAGCACCACA CCAAGGTGACAT TAA GTGTTGCCTTGG TTTCTGGATATCATT TERM 1680 1705043 - 1705033 - f 74 -4.6 -4.86001 | AGGAGGCTAGAAAAA GCGA AGG CCGC ATTGTAATGATGCGG Ssed_1438 1705153 - 1706625 + | RNA-directed DNA polymerase TERM 1681 1706990 - 1706965 - T 79 -11.3 -2.5155 | opp_overlap 1706970, overlap 1706964 1706961 1706970 GATAACTAAAAGGAT GAAAAGGTGTA TCCC TACACCTTCTC CCTTCGGTCGCCAAT TERM 1682 1706985 - 1706970 - T 78 -7.6 -4.42667 | opp_overlap 1706970, overlap 1706965 1706964 1706961 CTAAAAGGATGAAAA GGTGTA TCCC TACACC TTCTCCCTTCGGTCG Ssed_1439 1707635 - 1706979 - | hexapaptide repeat-containing transferase Ssed_1440 1708329 - 1707604 - | hypothetical protein TERM 1683 1708256 - 1708269 + gr 70 -2.3 -4.93365 | opp_overlap 1708242, overlap 1708257 ACGAGCCCGGGCTGT CTCGG AATG CCGAA TTTTTGCTTATAGGG Ssed_1441 1708773 - 1708390 - | putative lipoprotein Ssed_1442 1710215 - 1708896 - | hypothetical protein TERM 1684 1709979 - 1709999 + g 71 -8.3 -3.66288 | overlap 1709974 GACGAGCTCCTTGCC GATGGCCAT TAT ATTGCCATC TTCTATTAACAGGTC Ssed_1443 1713286 - 1710212 - | amidohydrolase TERM 1685 1713406 - 1713418 + r 84 -10.5 -3.84266 | opp_overlap 1713406 AGAGGCATAAAAAAA CCGGC CAG GCCGG TTTAATATAGAATGT TERM 1686 1713418 - 1713406 - R 100 -10.5 -5.65177 | opp_overlap 1713406 AGAGGCATAAAAAAA CCGGC CAG GCCGG TTTAATATAGAATGT Ssed_1444 1713838 - 1713446 - | histone family protein nucleoid-structuring protein H-NS Ssed_1445 1714159 - 1714908 + | electron transfer flavoprotein beta-subunit TERM 1687 1715428 - 1715412 - g 71 -4.3 -4.7629 | opp_overlap 1715412, overlap 1715414 GTATCAATCGAAAAA GTCAGCG ATT CACTGTC TCAGTTTGTATCCCA Ssed_1446 1714908 - 1715831 + | electron transfer flavoprotein, alpha subunit TERM 1688 1715903 - 1715943 + F 100 -13.5 -4.87786 | gap 1, opp_overlap 1715905, overlap 1715896 1715906 1715909 GCGTGAACTCGATCA CATTGAGCGGCTTTGGGG TAGAAT CCTCAAAGCCGCTTA-TG TTTTTATGACCTTCA TERM 1689 1715906 - 1715941 + F 100 -16.3 -4.05669 | opp_overlap 1715905, overlap 1715896 1715903 1715909 TGAACTCGATCACAT TGAGCGGCTTTGGGG TAGAAT CCTCAAAGCCGCTTA TGTTTTTATGACCTT TERM 1690 1715909 - 1715938 + F 100 -15.8 -4.13816 | opp_overlap 1715905, overlap 1715896 1715906 1715903 ACTCGATCACATTGA GCGGCTTTGGGG TAGAAT CCTCAAAGCCGC TTATGTTTTTATGAC Ssed_1447 1716289 - 1717854 + | Na+/H+ antiporter NhaC TERM 1691 1717948 - 1717922 - T 100 -18.2 -4.05322 | opp_overlap 1717922 1717926, overlap 1717926 AAAGCTGTATATAAA GAAAGCCACTCA TAA TGAGTGGCTTTC TTATATTTGATAGTA TERM 1692 1717922 - 1717948 + T 100 -18.2 -3.87323 | opp_overlap 1717922 1717926, overlap 1717926 AAAGCTGTATATAAA GAAAGCCACTCA TAA TGAGTGGCTTTC TTATATTTGATAGTA TERM 1693 1717944 - 1717926 - T 100 -13.2 -4.62441 | opp_overlap 1717922 1717926, overlap 1717922 CTGTATATAAAGAAA GCCACTCA TAA TGAGTGGC TTTCTTATATTTGAT TERM 1694 1717926 - 1717944 + T 100 -13.2 -4.53047 | opp_overlap 1717926 1717922, overlap 1717922 CTGTATATAAAGAAA GCCACTCA TAA TGAGTGGC TTTCTTATATTTGAT Ssed_1448 1720163 - 1717995 - | peptidyl-dipeptidase Dcp TERM 1695 1718672 - 1718687 + g 100 -4.6 -5.82172 | opp_overlap 1718668 AACTGACGAATGTTG GCTCTC CATC GGGGGC TTTTTTTATGTTCAT Ssed_1449 1720444 - 1721022 + | thymidine kinase TERM 1696 1721198 - 1721161 - T 100 -14.3 -4.41548 | opp_overlap 1721166, overlap 1721166 CTATATGTGATAAAA GTAAACGGCGAGATAAG GTGA CTTATCTCGCCGTTTTA ATCTAGTTTAGACAG TERM 1697 1721193 - 1721166 - T 100 -18.6 -4.26881 | opp_overlap 1721166, overlap 1721161 TGTGATAAAAGTAAA CGGCGAGATAAG GTGA CTTATCTCGCCG TTTTAATCTAGTTTA TERM 1698 1721166 - 1721193 + T 100 -18.6 -4.40894 | opp_overlap 1721166 1721161 TGTGATAAAAGTAAA CGGCGAGATAAG GTGA CTTATCTCGCCG TTTTAATCTAGTTTA Ssed_1450 1721633 - 1721196 - | hypothetical protein Ssed_1451 1722343 - 1721765 - | methylation site containing protein TERM 1699 1722687 - 1722667 - R 93 -8.3 -5.34555 | opp_overlap 1722686 CTAGATTATAAAAAA GCCCAGA TTAGGTC TCTGGGC TACCAAGAAGCTTGT Ssed_1452 1723383 - 1722727 - | 3-oxoacid CoA-transferase TERM 1700 1722901 - 1722937 + g 70 -2.2 -4.84359 | opp_overlap 1722894, overlap 1722921 GCCAAAACCTGTCAG GGGCAGCTCGCACTTA GGCAG TAGCTTCGAGTTACCC TTTTTATCGGCATGC Ssed_1453 1724113 - 1723400 - | 3-oxoacid CoA-transferase Ssed_1454 1725017 - 1724127 - | pyruvate carboxyltransferase Ssed_1455 1727094 - 1725019 - | carbamoyl-phosphate synthase L chain, ATP-binding TERM 1701 1725157 - 1725113 - G 76 -7.3 -4.44667 | gap 1, opp_overlap 1725113 1725115, overlap 1725123 GGCTCGAAGAAGAAA GCTGAGACTACACCATCGAA GGGAGA CTCGATGGTGTACTC-CATC TTCATCGCCTCCATC Ssed_1456 1727935 - 1727096 - | enoyl-CoA hydratase/isomerase TERM 1702 1728037 - 1728056 + r 93 -13.6 -3.21747 | TCATTCTGAGCATCA GCTGGCAG CGGA CTGCCAGC TTCGTGATCACATAC Ssed_1457 1729671 - 1728064 - | propionyl-CoA carboxylase Ssed_1458 1730909 - 1729740 - | acyl-CoA dehydrogenase domain-containing protein Ssed_1459 1731368 - 1730970 - | MerR family transcriptional regulator TERM 1703 1731512 - 1731528 + H 71 -3.7 -4.90013 | overlap 1731514 TTGTTTGGTGGTTAG CTGTTAA TTT TTAACTG TTTTTCGTTGGCTTG TERM 1704 1731805 - 1731780 - H 72 -9.1 -3.28984 | TAATGGAATGATCAA CCTCTATTAGT ATCG ACTCATAGAGG AAGTATCGAAGGAAG Ssed_1460 1731907 - 1733823 + | AMP-dependent synthetase and ligase TERM 1705 1733893 - 1733926 + F 95 -15.5 -2.70932 | opp_overlap 1733896, overlap 1733888 ATCAACTTCACCTCA TAACGTATGCAGGAT CTTA ATCCTGCATACGTAA TCATTAAACCAACAC TERM 1706 1733923 - 1733896 - f 100 -17.2 -3.3334 | opp_overlap 1733888 1733893 AACTTCACCTCATAA CGTATGCAGGAT CTTA ATCCTGCATACG TAATCATTAAACCAA Ssed_1461 1734400 - 1735953 + | 6-phosphogluconate dehydrogenase TERM 1707 1735985 - 1736014 + T 93 -10.9 -4.76123 | gap 1, opp_overlap 1735983 1735985, overlap 1735989 ATCTGTTTTGAAATA TT-GACGGCTTCCT GAC AGGAAGCCGTTTAA TTTTATTCATAGTTT TERM 1708 1736013 - 1735985 - T 77 -10.3 -3.34517 | opp_overlap 1735985 1735989, overlap 1735983 ATCTGTTTTGAAATA TTGACGGCTTCCT GAC AGGAAGCCGTTTA ATTTTATTCATAGTT TERM 1709 1735989 - 1736009 + T 100 -15.5 -4.33854 | opp_overlap 1735985 1735983, overlap 1735985 GTTTTGAAATATTGA CGGCTTCCT GAC AGGAAGCCG TTTAATTTTATTCAT Ssed_1462 1737429 - 1736017 - | HD-GYP domain-containing protein Ssed_1463 1737611 - 1738510 + | hypothetical protein TERM 1710 1738525 - 1738550 + T 72 -8.3 -3.53012 | opp_overlap 1738525, overlap 1738516 GTTTTGTGAGATAAA CACCATGGAGT ATTT ATCCCATGGTG TTTGAAACCGCCAGC TERM 1711 1738550 - 1738525 - T 79 -8.3 -4.03234 | opp_overlap 1738516 1738525 GTTTTGTGAGATAAA CACCATGGAGT ATTT ATCCCATGGTG TTTGAAACCGCCAGC Ssed_1464 1739476 - 1738604 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase Ssed_1465 1739898 - 1740821 + | short-chain dehydrogenase/reductase SDR Ssed_1466 1740909 - 1741775 + | palmitoyl-CoA hydrolase Ssed_1467 1741906 - 1742295 + | hypothetical protein TERM 1712 1742348 - 1742335 - f 70 -8.1 -3.71873 | opp_overlap 1742335 CTATTGATATTTAAA GGAGC TTAG GCTCC TTTTTTGTTGGGCTT TERM 1713 1742335 - 1742348 + F 93 -8.1 -5.4756 | opp_overlap 1742335 CTATTGATATTTAAA GGAGC TTAG GCTCC TTTTTTGTTGGGCTT Ssed_1468 1742405 - 1742998 + | hypothetical protein Ssed_1469 1743333 - 1743980 + | outer membrane protein W TERM 1714 1744021 - 1744047 + T 100 -12.4 -4.49756 | opp_overlap 1744027, overlap 1744027 AAGACACTAGAAAGT AAAAAAGGAGCC TCA GGCTCCTTTTTG TTTTAATCTTTCGAA TERM 1715 1744027 - 1744041 + T 100 -11.4 -5.52079 | opp_overlap 1744027, overlap 1744021 CTAGAAAGTAAAAAA GGAGCC TCA GGCTCC TTTTTGTTTTAATCT TERM 1716 1744041 - 1744027 - T 100 -11.4 -5.42514 | opp_overlap 1744027 1744021 CTAGAAAGTAAAAAA GGAGCC TCA GGCTCC TTTTTGTTTTAATCT Ssed_1470 1744838 - 1744071 - | short-chain dehydrogenase/reductase SDR Ssed_1471 1745326 - 1745727 + | hypothetical protein TERM 1717 1745965 - 1745977 + G 75 -7.7 -4.21974 | opp_overlap 1745965 AAATTGAGACCGAAA CGCAA CTT TTGCG TTTATTGGGTAATAC Ssed_1472 1745811 - 1746755 + | homoserine O-succinyltransferase TERM 1718 1747182 - 1747164 - g 72 -10.2 -3.05384 | CGTGGCTTCACCGAA GTTGGCCG CGA CGGCCATC AAGGGGCTAATGGAT Ssed_1473 1747063 - 1748253 + | Acetyl-CoA C-acetyltransferase Ssed_1474 1748425 - 1749930 + | methylmalonate-semialdehyde dehydrogenase TERM 1719 1749947 - 1749985 + F 79 -10.2 -3.57309 | opp_overlap 1749944 1749948, overlap 1749948 CCGGTATAGAAAGTA ACCCGCTGTCTATGAGGT TCA GCCCCATAGGCAGCAGGA TTTAGGCCCGTTTTA TERM 1720 1749984 - 1749948 - f 100 -15.2 -3.65294 | opp_overlap 1749947 1749948, overlap 1749944 CGGTATAGAAAGTAA CCCGCTGTCTATGAGG TTCAG CCCCATAGGCAGCAGG ATTTAGGCCCGTTTT TERM 1721 1749948 - 1749984 + F 91 -13.7 -2.73903 | opp_overlap 1749948 1749944, overlap 1749947 CGGTATAGAAAGTAA CCCGCTGTCTATGAGGT TCA GCCCCATAGGCAGCAGG ATTTAGGCCCGTTTT TERM 1722 1750281 - 1750293 + G 71 -2.6 -4.86133 | ATGTGATTCAGCGTG CCGG CGAGC TCGG TTTTTGCTCTCTATA Ssed_1475 1750148 - 1751305 + | butyryl-CoA dehydrogenase Ssed_1476 1751447 - 1752220 + | enoyl-CoA hydratase Ssed_1477 1752220 - 1753380 + | enoyl-CoA hydratase/isomerase TERM 1723 1754032 - 1754017 - g 71 -4 -4.7629 | CGAGCAAGCTAAAAA CATGCT AAGT AACATG GGGGCGAACATCTTT Ssed_1478 1753553 - 1754479 + | 3-hydroxyisobutyrate dehydrogenase Ssed_1479 1754484 - 1755242 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1724 1755261 - 1755304 + T 100 -21.4 -3.32844 | opp_overlap 1755265 1755269 1755276, overlap 1755262 1755265 1755269 1755276 TATCGGCATCTGTAA TCAACCAATAAAAAACGAGC TTAG GCTCGTTTTTTATTGGTTGC TTGTCCGATAGCAAG TERM 1725 1755262 - 1755303 + T 100 -24.9 -2.59564 | opp_overlap 1755265 1755269 1755276, overlap 1755261 1755265 1755269 1755276 ATCGGCATCTGTAAT CAACCAATAAAAAACGAGC TTAG GCTCGTTTTTTATTGGTTG CTTGTCCGATAGCAA TERM 1726 1755265 - 1755300 + T 100 -20.8 -3.45118 | opp_overlap 1755265 1755269 1755276, overlap 1755262 1755261 1755269 1755276 GGCATCTGTAATCAA CCAATAAAAAACGAGC TTAG GCTCGTTTTTTATTGG TTGCTTGTCCGATAG TERM 1727 1755300 - 1755265 - T 100 -20.8 -3.34895 | opp_overlap 1755265 1755262 1755261 1755269 1755276, overlap 1755269 1755276 GGCATCTGTAATCAA CCAATAAAAAACGAGC TTAG GCTCGTTTTTTATTGG TTGCTTGTCCGATAG TERM 1728 1755269 - 1755296 + T 100 -14.4 -3.48064 | opp_overlap 1755265 1755269 1755276, overlap 1755265 1755262 1755261 1755276 TCTGTAATCAACCAA TAAAAAACGAGC TTAG GCTCGTTTTTTA TTGGTTGCTTGTCCG TERM 1729 1755296 - 1755269 - T 100 -14.4 -3.45366 | opp_overlap 1755269 1755265 1755262 1755261 1755276, overlap 1755265 1755276 TCTGTAATCAACCAA TAAAAAACGAGC TTAG GCTCGTTTTTTA TTGGTTGCTTGTCCG TERM 1730 1755289 - 1755276 - T 100 -8.1 -5.5604 | opp_overlap 1755269 1755265 1755262 1755261 1755276, overlap 1755269 1755265 TCAACCAATAAAAAA CGAGC TTAG GCTCG TTTTTTATTGGTTGC TERM 1731 1755276 - 1755289 + T 100 -8.1 -5.5604 | opp_overlap 1755276 1755269 1755265, overlap 1755269 1755265 1755262 1755261 TCAACCAATAAAAAA CGAGC TTAG GCTCG TTTTTTATTGGTTGC TERM 1732 1755465 - 1755450 - T 88 -2.5 -5.94597 | opp_overlap 1755443 GAACATCAAAAAAAA CAGCC TCTAGC GACTG TTTTTTGATTTGAGC Ssed_1480 1755791 - 1755480 - | hypothetical protein TERM 1733 1755566 - 1755578 + g 70 -7.7 -3.86015 | ATTGCTTATGACCAT CTAGC TCA GCTAG TTTGTCCCAAGACTC TERM 1734 1756345 - 1756329 - g 73 -5.1 -4.64676 | GCATGTGGAAGAAAA CTTCGAG CAC CTTGAAG ACAATGAGCTACCTG Ssed_1481 1756141 - 1758075 + | radical SAM family protein TERM 1735 1758214 - 1758185 - f 100 -12.3 -5.31456 | opp_overlap 1758185 TTAATCTATAAAAAA GGCCACTTTCT ATTCCCGA AGAAAGTGGCC TTTTGCAGTGGTCAA TERM 1736 1758185 - 1758214 + F 100 -12.3 -4.15565 | opp_overlap 1758185 TTAATCTATAAAAAA GGCCACTTTCT ATTCCCGA AGAAAGTGGCC TTTTGCAGTGGTCAA Ssed_1482 1758508 - 1758756 + | hypothetical protein Ssed_1483 1758793 - 1760844 + | peptidase S9 prolyl oligopeptidase Ssed_1484 1761344 - 1760964 - | MerR family transcriptional regulator TERM 1737 1761894 - 1761918 + G 73 -3.6 -4.84761 | gap 1, overlap 1761893 GCTTGGTCACCTTAG TG-CTTCTGGT CACT ACCGGAGGACA TTTTTATCAGGGTAT TERM 1738 1763081 - 1763067 - g 71 -6.4 -4.26903 | TGGAGCTGATGAAAA TGCAGA GCG TCCGCA ACATGGATGCGCTGG Ssed_1485 1761485 - 1763743 + | copper-translocating P-type ATPase Ssed_1486 1763921 - 1765495 + | ABC transporter-related protein TERM 1739 1765543 - 1765524 - T 77 -7.8 -4.24294 | opp_overlap 1765524 ATGAATTAGTGAAAA GCCTCAGA GAGA TCTGGGGC TTTTTTATGTCTGGC TERM 1740 1765524 - 1765543 + T 100 -10 -5.4251 | opp_overlap 1765524 ATGAATTAGTGAAAA GCCTCAGA GAGA TCTGGGGC TTTTTTATGTCTGGC TERM 1741 1765734 - 1765772 + T 70 -8 -3.75418 | opp_overlap 1765754 1765758, overlap 1765736 1765737 CTGGAACATTTATGC CTAGGGCCTAGGGCCTAG AAT CTAGATCCTAGACCCCTG TTTACACTTTATCTC TERM 1742 1765736 - 1765770 + T 74 -9.2 -3.44991 | opp_overlap 1765754 1765758, overlap 1765734 1765737 GGAACATTTATGCCT AGGGCCTAGGGCCTAG AAT CTAGATCCTAGACCCC TGTTTACACTTTATC TERM 1743 1765737 - 1765769 + T 83 -12.7 -2.66271 | opp_overlap 1765754 1765758, overlap 1765736 1765734 GAACATTTATGCCTA GGGCCTAGGGCCTAG AAT CTAGATCCTAGACCC CTGTTTACACTTTAT Ssed_1487 1767020 - 1765809 - | putative NupC family protein (permease) TERM 1744 1767123 - 1767107 - R 77 -8.7 -3.85698 | opp_overlap 1767118 1767120, overlap 1767111 CTTGCTTTGGATAAA GCGACAT TTG ACGTCGC CAAGTGAAGACACTT TERM 1745 1767577 - 1767553 - R 71 -5 -4.51378 | gap 1, opp_overlap 1767558, overlap 1767558 ACCTAGAGGAGAAAA GTTAAGGCCTG CAGG CAGGCCTTG-C TAGGGGAAATTTATT TERM 1746 1767573 - 1767558 - R 77 -10.4 -3.42658 | opp_overlap 1767558, overlap 1767553 GAGGAGAAAAGTTAA GGCCTG CAGG CAGGCC TTGCTAGGGGAAATT TERM 1747 1767558 - 1767573 + r 75 -10.4 -3.14463 | opp_overlap 1767558 1767553 GAGGAGAAAAGTTAA GGCCTG CAGG CAGGCC TTGCTAGGGGAAATT TERM 1748 1767626 - 1767591 - R 70 -9.9 -2.65354 | overlap 1767587 1767588 GCTAGGGGAAATTTA TTGACTACTTACTGA AACGCG TCTGCAAGTAGTCAA ATACTGCACGAATAC Ssed_1488 1768956 - 1767595 - | leucyl aminopeptidase TERM 1749 1768207 - 1768230 + g 74 -3 -5.14563 | opp_overlap 1768209 1768210, overlap 1768209 1768211 ATGTGCTAAGCCGAT AACGTGGGCG GCGC CGCCCATATC TTTTTTCATCAGACG TERM 1750 1768211 - 1768226 + g 79 -10.4 -3.69447 | opp_overlap 1768210 1768209, overlap 1768209 1768207 GCTAAGCCGATAACG TGGGCG GCGC CGCCCA TATCTTTTTTCATCA Ssed_1489 1769544 - 1769146 - | hypothetical protein TERM 1751 1769393 - 1769421 + g 75 -5.3 -4.7373 | overlap 1769391 1769395 CGGGTGTAACGCTTG TAGGTGACCAA CATCTCT TTGGTCTCCTG TTTTTCCTGCGCTAA TERM 1752 1769955 - 1769981 + G 77 -6.6 -4.65168 | overlap 1769959 GAACAGTTCGATGAT GATTTGCCAAAT GAT GTTTGGCATGTC TTTTTACGGTGTCAT Ssed_1490 1769950 - 1771407 + | PTR2 family transport protein TERM 1753 1771433 - 1771460 + T 100 -15.8 -3.54741 | GAATCGCTGCATAGG TCATTCCTCTCA TCAT TGAGAGGAATGA TTTCAACCCCTCATA Ssed_1491 1772282 - 1771527 - | putative ribonuclease HI TERM 1754 1772153 - 1772143 - G 76 -8.2 -4.07568 | opp_overlap 1772136 GCTCCCTTGCCAAAA GCCG CTT CGGC TTCGGCTTGGCTGGG Ssed_1492 1773040 - 1772432 - | hypothetical protein Ssed_1493 1773667 - 1773074 - | lysine exporter protein (LysE/YggA) Ssed_1494 1773863 - 1774426 + | hypothetical protein TERM 1755 1774759 - 1774770 + F 75 -5.8 -4.78029 | ATCGCTAAAGGCCAA CGTC TATA GACG TTTTAATTTTATTAA Ssed_1495 1774845 - 1775813 + | hypothetical protein TERM 1756 1775878 - 1775853 - T 95 -11.9 -4.58283 | opp_overlap 1775848 1775853 TAACGTCGTTAAAAA TCGCAGTCAGA TTAA TCTGGCTGCGA TTGCCTCTATTTTTT TERM 1757 1775853 - 1775878 + T 95 -14.1 -3.2657 | opp_overlap 1775853, overlap 1775848 TAACGTCGTTAAAAA TCGCAGTCAGA TTAA TCTGGCTGCGA TTGCCTCTATTTTTT TERM 1758 1775906 - 1775929 + T 100 -18.2 -5.5112 | TTTTACTCGCTTTTA CGGGACCGGT TAAT ACCGGTCCCG TTTTTTATTAATCAG Ssed_1496 1778122 - 1775972 - | TonB-dependent receptor TERM 1759 1778263 - 1778244 - R 95 -8.6 -5.45652 | opp_overlap 1778244 AGCCGGAATAAAAAA GGACAGTA TAAA TACTGCCC TTGTTACTTGTACCA Ssed_1497 1779454 - 1778291 - | NirV precursor TERM 1760 1779904 - 1779954 + r 93 -11.5 -4.24432 | gap 1, opp_overlap 1779903 1779906, overlap 1779908 AAATAAAAACTAATT TAGCCTATTTTAACCAATGCTCAG TTAT TTGGGCATTGGTTAAAA-GGGATA TTTCATTTTCGCTTT TERM 1761 1779908 - 1779951 + r 90 -13.4 -2.80977 | opp_overlap 1779906 1779903, overlap 1779904 AAAAACTAATTTAGC CTATTTTAACCAATGCTCAG TTAT TTGGGCATTGGTTAAAAGGG ATATTTCATTTTCGC Ssed_1498 1782032 - 1779969 - | methyl-accepting chemotaxis sensory transducer Ssed_1499 1783309 - 1782455 - | hypothetical protein TERM 1762 1783109 - 1783131 + g 85 -10.6 -4.13014 | ACTTTTTTTGGTCTT TTTGCCGCAG TTA CTGCAGCAAA TTTTGCCGGTATGCG TERM 1763 1783238 - 1783248 + g 95 -3.2 -5.9873 | CCCATCATTATCTAG TGTG GCG CGCA TTTTTTTTATCGTAC TERM 1764 1783517 - 1783495 - R 81 -12.1 -2.52015 | opp_overlap 1783495, overlap 1783494 1783497 GGCATATTCATGAAG GAGAGTGAG TGGAT CTCACTCTC TTTGAGCTGGTCTTT TERM 1765 1783495 - 1783517 + r 89 -12.1 -3.64184 | opp_overlap 1783495 1783494 1783497 GGCATATTCATGAAG GAGAGTGAG TGGAT CTCACTCTC TTTGAGCTGGTCTTT Ssed_1500 1784047 - 1783547 - | amino acid-binding ACT domain-containing protein Ssed_1501 1784230 - 1786488 + | binding-protein-dependent transport systems inner membrane component TERM 1766 1787109 - 1787129 + G 76 -9.7 -3.63922 | opp_overlap 1787096, overlap 1787107 GATGGAAAGCGACTC GCCCTCGAT GAT ATCGAGGCC TCTTTTGAGGCGCAT Ssed_1502 1786659 - 1788311 + | phosphate ABC transporter, inner membrane subunit PstA TERM 1767 1788410 - 1788390 - f 86 -11.1 -3.9279 | opp_overlap 1788392 1788394, overlap 1788392 ACCCAATGGCATAAA TAGAGCGGC CAA GCCGCTCTG TTAAAGTGATAGGAT TERM 1768 1788392 - 1788408 + F 93 -13.7 -3.07043 | opp_overlap 1788390 1788392, overlap 1788394 CCAATGGCATAAATA GAGCGGC CAA GCCGCTC TGTTAAAGTGATAGG TERM 1769 1788408 - 1788392 - f 95 -13.7 -3.55191 | opp_overlap 1788392 1788394, overlap 1788390 CCAATGGCATAAATA GAGCGGC CAA GCCGCTC TGTTAAAGTGATAGG TERM 1770 1788394 - 1788406 + F 75 -10.5 -3.09289 | opp_overlap 1788392 1788390, overlap 1788392 AATGGCATAAATAGA GCGGC CAA GCCGC TCTGTTAAAGTGATA Ssed_1503 1788431 - 1789249 + | phosphate ABC transporter, ATPase subunit TERM 1771 1789744 - 1789728 - g 83 -8.7 -4.60924 | TAAACGCTCTAAAAA CCAGCAG CCA CTACTGG TAAGCATCGAGAACA Ssed_1504 1789369 - 1790079 + | transcriptional regulator PhoU TERM 1772 1790124 - 1790145 + F 85 -7.3 -4.96501 | opp_overlap 1790124 AAAATCTTTTTAAAA CAAGCGGCT ACGG AGTTGCTTG TTTGTTTTTATAACG Ssed_1505 1790478 - 1792484 + | choline/carnitine/betaine transporter TERM 1773 1792569 - 1792544 - f 95 -11.9 -4.19735 | opp_overlap 1792544 CCGGTTAAAATCAAA CAGCCCTGATG GTAT CATTAGGGCTG TTTTTTTATATTCAC TERM 1774 1792544 - 1792569 + F 100 -14.1 -5.80817 | opp_overlap 1792544 CCGGTTAAAATCAAA CAGCCCTGATG GTAT CATTAGGGCTG TTTTTTTATATTCAC TERM 1775 1792892 - 1792880 - g 70 -7.7 -3.86935 | TAATCATGATAATAA CCCAT CTG ATGGG TCTAACTGGGAGTTA Ssed_1506 1792680 - 1793042 + | hypothetical protein TERM 1776 1793084 - 1793114 + T 72 -8.4 -3.54459 | opp_overlap 1793090 GGTTTCTGGCTTTGA GAGGAAGAGATATG CGG TATATCTCTATCTC TTTAGCAGGAGTTAC Ssed_1507 1793374 - 1793126 - | hypothetical protein TERM 1777 1794029 - 1794050 + G 78 -5.1 -4.98531 | ATGACCGCCTTCTAT GAGACTGGT GCCG GTCGGTCTC TTTTTGGTTTACAGC Ssed_1508 1793675 - 1794853 + | methyl-accepting chemotaxis protein Ssed_1509 1795234 - 1796514 + | hypothetical protein Ssed_1510 1796774 - 1797823 + | 3-oxoacyl-(acyl carrier protein) synthase III Ssed_1511 1797987 - 1798874 + | alpha/beta hydrolase fold TERM 1778 1798915 - 1798938 + F 95 -14 -3.57263 | opp_overlap 1798915, overlap 1798918 AGGATAAAATAAAAA TAAGCGGTCA ATAT TGACCGCTTA TTTACGAATAGCACT TERM 1779 1798938 - 1798915 - f 100 -14 -5.56263 | opp_overlap 1798915 1798918 AGGATAAAATAAAAA TAAGCGGTCA ATAT TGACCGCTTA TTTACGAATAGCACT TERM 1780 1798918 - 1798935 + F 90 -11.3 -3.92542 | opp_overlap 1798915, overlap 1798915 ATAAAATAAAAATAA GCGGTCA ATAT TGACCGC TTATTTACGAATAGC TERM 1781 1799162 - 1799142 - g 71 -7.5 -4.13654 | TCTCTAAATTATAAA GAGCTCACC TTT GCCGAGCTC GATAGTCTCAGTGAT TERM 1782 1799593 - 1799610 + G 74 -6.9 -4.35483 | overlap 1799594 CCAGCGGCAGTACCG GCACGCC AAAG GGCGTGG TTTATTCTCATAAGA TERM 1783 1799594 - 1799609 + G 73 -10.4 -3.20808 | overlap 1799593 CAGCGGCAGTACCGG CACGCC AAAG GGCGTG GTTTATTCTCATAAG TERM 1784 1800691 - 1800679 - g 73 -4.9 -4.78149 | GCCATAATGCAAAAA TTTTC CGT GAAAA ATTGGCCGTTTGGGC Ssed_1512 1798971 - 1800728 + | peptide synthase TERM 1785 1801321 - 1801305 - g 74 -4.3 -5.00138 | opp_overlap 1801304 GATCCAAACTAAAAA CGGTCTC ATT AAGGCCG CATCTTATCTGGGGG Ssed_1513 1800734 - 1801831 + | steroid dehydrogenase TERM 1786 1802013 - 1801997 - g 73 -7.3 -4.23892 | GTGAATGATGCAAAA TCCCATC GAC GATAGGA AGCTTGTCAGAACGG Ssed_1514 1801989 - 1802438 + | glutathione-dependent formaldehyde-activating, GFA Ssed_1515 1803343 - 1802495 - | pseudouridine synthase Ssed_1516 1803740 - 1803411 - | small multidrug resistance protein TERM 1787 1803805 - 1803782 - H 91 -8.1 -5.27923 | overlap 1803783 TAATGCGATAAAAAA TGGCCCTAC TGGAAG GTAGGGCCG AAAAACACTAAGTAG TERM 1788 1803804 - 1803783 - H 88 -11.6 -3.75669 | overlap 1803782 AATGCGATAAAAAAT GGCCCTAC TGGAAG GTAGGGCC GAAAAACACTAAGTA Ssed_1517 1804267 - 1806015 + | phosphoglucomutase/phosphomannomutase alpha/beta/subunit Ssed_1518 1807214 - 1806057 - | transcriptional regulator, CdaR TERM 1789 1807332 - 1807343 + r 76 -7.2 -4.15577 | TGTGGGAGGTGAATC GGGC AGCC GCCC TTCTTTCATTCTTCA Ssed_1519 1808133 - 1807414 - | hypothetical protein Ssed_1520 1809337 - 1808366 - | GGDEF domain-containing protein Ssed_1521 1810123 - 1809479 - | phage SPO1 DNA polymerase domain-containing protein Ssed_1522 1810826 - 1810167 - | hypothetical protein TERM 1790 1810963 - 1810992 + r 100 -15.1 -4.258 | opp_overlap 1810963 AGTGGGATATAAAAA GGCCAGATTCCAT ACAG ATGGAATCCGGCC TTTCTTAGTCGCTAG TERM 1791 1810992 - 1810963 - R 100 -17.3 -4.9725 | opp_overlap 1810963 AGTGGGATATAAAAA GGCCAGATTCCAT ACAG ATGGAATCCGGCC TTTCTTAGTCGCTAG TERM 1792 1811078 - 1811115 + r 91 -10 -4.58395 | gap 1 AGGTGTGCGGTGATA GGTCATAGAGCT-GGCT GTTTG AGCCTGGCTCTATAACC TTTTTCACAACTACA Ssed_1523 1813237 - 1811126 - | outer membrane protein precursor MtrB TERM 1793 1813056 - 1813068 + g 79 -10.5 -3.66178 | opp_overlap 1813015 CCGACACCGACTGTG CCGGC AAA GCCGG TTTCAACTTCACAGC Ssed_1524 1814254 - 1813253 - | cytochrome c family protein TERM 1794 1814310 - 1814291 - R 89 -9.2 -4.74989 | opp_overlap 1814290 1814292, overlap 1814292 AAATAAGAGAGAAAA CGGGGGAG GTGA CTCCCCCT CTTTTCAACAAAGCT TERM 1795 1814292 - 1814309 + r 90 -12.7 -3.63744 | opp_overlap 1814291 1814292, overlap 1814290 AATAAGAGAGAAAAC GGGGGAG GTGA CTCCCCC TCTTTTCAACAAAGC TERM 1796 1814309 - 1814292 - R 87 -12.7 -3.42553 | opp_overlap 1814292 1814290, overlap 1814291 AATAAGAGAGAAAAC GGGGGAG GTGA CTCCCCC TCTTTTCAACAAAGC Ssed_1525 1816316 - 1814334 - | decaheme cytochrome c TERM 1797 1816043 - 1816055 + g 75 -3.3 -5.15969 | TTGAGCCTTGTGGAA GTAGC TGA GCAAC TTTTTTAACTTCAAA TERM 1798 1816575 - 1816552 - R 90 -11.2 -3.98236 | opp_overlap 1816551 1816561, overlap 1816561 AAAGCTTAGCATAAA CCGATAAAAT GCTG ATTTTATCGG CATTTAGGTCAATAT TERM 1799 1816577 - 1816561 - R 71 -5.1 -4.52803 | opp_overlap 1816551 1816561, overlap 1816552 CATAAACCGATAAAA TGCTGAT TTT ATCGGCA TTTAGGTCAATATCT TERM 1800 1816659 - 1816677 + r 86 -10.2 -4.0098 | opp_overlap 1816660, overlap 1816660 TTGTAGACAGTAAAA AGGGAGGC TAT GCCTCCCC TTATTTAGGTTGCGG TERM 1801 1816676 - 1816660 - R 100 -13.7 -4.84527 | opp_overlap 1816660 1816659 TGTAGACAGTAAAAA GGGAGGC TAT GCCTCCC CTTATTTAGGTTGCG TERM 1802 1816660 - 1816676 + r 93 -13.7 -3.00106 | opp_overlap 1816660, overlap 1816659 TGTAGACAGTAAAAA GGGAGGC TAT GCCTCCC CTTATTTAGGTTGCG Ssed_1526 1818967 - 1816751 - | decaheme cytochrome c TERM 1803 1819429 - 1819404 - R 100 -16.3 -4.62475 | opp_overlap 1819409 1819428, overlap 1819409 ATCTATAAAGCAAAA GAAAAGGGAGG CTAG CCTCCCTTTTC TCAGCTTATTGCAGA TERM 1804 1819424 - 1819409 - R 100 -10.4 -5.22258 | opp_overlap 1819409, overlap 1819404 TAAAGCAAAAGAAAA GGGAGG CTAG CCTCCC TTTTCTCAGCTTATT TERM 1805 1819409 - 1819424 + r 90 -10.4 -4.44461 | opp_overlap 1819409 1819404 TAAAGCAAAAGAAAA GGGAGG CTAG CCTCCC TTTTCTCAGCTTATT Ssed_1527 1821616 - 1819448 - | decaheme cytochrome c Ssed_1528 1823622 - 1821682 - | decaheme cytochrome c MtrF Ssed_1529 1825892 - 1823757 - | outer membrane protein, putative TERM 1806 1825556 - 1825574 + g 74 -3.1 -5.04249 | overlap 1825558 GCTTGTCGGCTTCGA TTCGGGT CTGAT ATCCGGA TTTATTTTTTAACAG Ssed_1530 1826873 - 1825908 - | cytochrome c family protein Ssed_1531 1827301 - 1827555 + | FeoA family protein TERM 1807 1828076 - 1828088 + G 71 -9.1 -3.44622 | GGTAAAGTGTCTGAA GCACC TCT GGTGC TTGATTATGACCCTC Ssed_1532 1827548 - 1829842 + | ferrous iron transport protein B TERM 1808 1829886 - 1829869 - f 93 -11.3 -4.58395 | opp_overlap 1829869 TTCATGGTTTAAAAA GCAGCGA TTCT TCGCTGC TTTTTTGTTTTATCA TERM 1809 1829869 - 1829886 + F 100 -11.3 -5.86976 | opp_overlap 1829869 TTCATGGTTTAAAAA GCAGCGA TTCT TCGCTGC TTTTTTGTTTTATCA TERM 1810 1831047 - 1831033 - g 76 -11.4 -2.75535 | opp_overlap 1831034 TGAAGAGCTTAATGA GCACGC ACC GCGTGC TATGGCAGTCATTAA TERM 1811 1831238 - 1831222 - g 82 -5.1 -5.13741 | GGAAGCGAATAAAAA GTACAAG CGT CTGGTAC AAGGTAAGGAAGTTC Ssed_1533 1830005 - 1831675 + | glutaminyl-tRNA synthetase TERM 1812 1831732 - 1831710 - T 100 -12.1 -4.84527 | opp_overlap 1831710 TTGATACATTAAAAA GGCTTTAGG TTTCC CCTAAAGCC TTTTTTGTTATGAAA TERM 1813 1831710 - 1831732 + T 100 -12.1 -5.55769 | opp_overlap 1831710 TTGATACATTAAAAA GGCTTTAGG TTTCC CCTAAAGCC TTTTTTGTTATGAAA Ssed_1534 1832440 - 1831844 - | hypothetical protein TERM 1814 1833336 - 1833351 + G 76 -9 -3.794 | TGCATTTATCGAGGC TCGCTC ATGT GAGCGA TTTGCTAAGTTAGCG Ssed_1535 1832806 - 1833582 + | tRNA--hydroxylase Ssed_1536 1834389 - 1833661 - | UDP-2,3-diacylglucosamine hydrolase TERM 1815 1834372 - 1834343 - G 80 -12.1 -2.78495 | overlap 1834338 1834340 GCACGAGTAATATCA GGGCGATCAGCAC TTAA GTGCAGATCGCCA ATAAAAAGTGTTCGC Ssed_1537 1834962 - 1834399 - | peptidylprolyl isomerase Ssed_1538 1835163 - 1836542 + | cysteinyl-tRNA synthetase TERM 1816 1836582 - 1836567 - T 100 -10.4 -5.64274 | opp_overlap 1836567 TTACCGATAAAAAAA GCCTGC AGAT GCAGGC TTTTTTTTATGCTCT TERM 1817 1836567 - 1836582 + T 100 -10.4 -6.00086 | opp_overlap 1836567 TTACCGATAAAAAAA GCCTGC AGAT GCAGGC TTTTTTTTATGCTCT Ssed_1539 1837505 - 1836651 - | methylenetetrahydrofolate dehydrogenase (NADP(+)) TERM 1818 1838267 - 1838245 - H 71 -9.8 -2.88544 | overlap 1838248 GCTCAGTTGGATAGA GCACCCGCCT TCT AAGCGGGTGG CCGCAGGTTCGAATC TERM 1819 1838264 - 1838248 - H 72 -10.1 -2.69468 | overlap 1838245 CAGTTGGATAGAGCA CCCGCCT TCT AAGCGGG TGGCCGCAGGTTCGA TERM 1820 1838430 - 1838398 - H 100 -16.5 -4.24342 | opp_overlap 1838407, overlap 1838407 TTCTTTATGAAGAAA GTTAAAAAAGCGACC CTA GGTCGCTTTTTTTAC GCCTGAAATTCACGT TERM 1821 1838407 - 1838421 + H 100 -11.4 -5.42259 | opp_overlap 1838407 1838398 AAGAAAGTTAAAAAA GCGACC CTA GGTCGC TTTTTTTACGCCTGA TERM 1822 1838421 - 1838407 - H 100 -11.4 -5.25805 | opp_overlap 1838407, overlap 1838398 AAGAAAGTTAAAAAA GCGACC CTA GGTCGC TTTTTTTACGCCTGA TERM 1823 1839907 - 1839872 - g 83 -8.5 -4.57341 | opp_overlap 1839871 AAGCTTTGTTAAAAA CTGCAAAATTAACTG AAAAAG CAGTCAATTTTGAAG AATTTATGAACAAGG Ssed_1540 1838635 - 1839939 + | trigger factor TERM 1824 1839977 - 1840006 + F 100 -15.1 -5.27335 | opp_overlap 1839977 1839978, overlap 1839966 1839978 GTTCACCATTTATAA TGGCTCGTATGAG GTTC CTCATGCGAGCCG TTTTTATTTAGGGAA TERM 1825 1840006 - 1839977 - f 80 -10.7 -3.37796 | opp_overlap 1839966 1839977 1839978, overlap 1839978 GTTCACCATTTATAA TGGCTCGTATGAG GTTC CTCATGCGAGCCG TTTTTATTTAGGGAA TERM 1826 1840005 - 1839978 - f 93 -14.2 -2.62463 | opp_overlap 1839966 1839977 1839978, overlap 1839977 TTCACCATTTATAAT GGCTCGTATGAG GTTC CTCATGCGAGCC GTTTTTATTTAGGGA TERM 1827 1839978 - 1840005 + F 100 -16.4 -3.75678 | opp_overlap 1839978 1839977, overlap 1839966 1839977 TTCACCATTTATAAT GGCTCGTATGAG GTTC CTCATGCGAGCC GTTTTTATTTAGGGA TERM 1828 1840342 - 1840358 + G 73 -2.1 -5.14563 | overlap 1840338 GTTTGTATCGGTCAA GCTGCCA GCA TGGGTGC TTTTTTACTCGCCGG Ssed_1541 1840030 - 1840641 + | ATP-dependent Clp protease proteolytic subunit TERM 1829 1841743 - 1841732 - g 72 -5.8 -4.33851 | opp_overlap 1841731 1841728, overlap 1841728 1841720 AAATGCGATAACAAA GCAG TTTG CTGC CTTGTTTGACATGGA Ssed_1542 1840725 - 1842002 + | ATP-dependent protease ATP-binding subunit TERM 1830 1842053 - 1842037 - f 73 -9.4 -3.21063 | opp_overlap 1842037, overlap 1842035 1842030 GATGTAAATTGAAGA GGAGCC TATAT GGCTCC TTTTTTATACTCTCG TERM 1831 1842037 - 1842053 + F 100 -9.4 -5.34555 | opp_overlap 1842037 1842035 1842030 GATGTAAATTGAAGA GGAGCC TATAT GGCTCC TTTTTTATACTCTCG TERM 1832 1842358 - 1842381 + G 77 -8.2 -4.24123 | gap 1 GCAGTGATGACATTT TTGAGGTCGGC ACC GTCG-CCTCAA TTTTACAGTTATTAA TERM 1833 1844148 - 1844136 - g 73 -7.7 -3.96624 | GATTTCTACGAGAAA CGTGA TAT TCACG TGCATGTACCTGAAG Ssed_1543 1842153 - 1844498 + | endopeptidase La Ssed_1544 1844772 - 1845044 + | histone family protein DNA-binding protein TERM 1834 1845104 - 1845121 + F 88 -9.1 -4.60487 | opp_overlap 1845104 GCGTCGTAATGATAA GCACTGC TTTA GCGGTGC TTTTTACGAATAATG TERM 1835 1845193 - 1845217 + F 100 -11.4 -5.48514 | opp_overlap 1845193 TAAAGTTTACGAAAA GGCGCATCTC CCAAA GTGATGCGCC TTTTTATTTATTAAT TERM 1836 1845217 - 1845193 - f 95 -12.1 -4.29432 | opp_overlap 1845193 TAAAGTTTACGAAAA GGCGCATCTCC CAA AGTGATGCGCC TTTTTATTTATTAAT TERM 1837 1845621 - 1845609 - g 74 -4.1 -4.84527 | TGCACAGATCAAAAA TGCCA TCA TGACA GAGCCTGCATTTCAA TERM 1838 1846906 - 1846949 + G 85 -12.4 -3.34222 | overlap 1846912 TTCCAGATGGCTCAG CCAGCTGCTAGTGCAGTGGT TGAT ACCGTTGCACTTGCTTCTGG TTATGCGGTAGTCGT TERM 1839 1846912 - 1846943 + G 83 -11.6 -3.56593 | overlap 1846906 ATGGCTCAGCCAGCT GCTAGTGCAGTGGT TGAT ACCGTTGCACTTGC TTCTGGTTATGCGGT Ssed_1545 1845253 - 1847118 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1840 1847164 - 1847147 - T 84 -6.9 -4.84642 | opp_overlap 1847148 1847156, overlap 1847142 1847148 GTCAAATGAATAAAA GGCCAGC ATTT GCTGGCT TTTTTTATGCCTGCG TERM 1841 1847148 - 1847163 + T 100 -10.4 -5.64274 | opp_overlap 1847147 1847142 1847148, overlap 1847156 TCAAATGAATAAAAG GCCAGC ATTT GCTGGC TTTTTTTATGCCTGC TERM 1842 1847163 - 1847148 - T 79 -10.4 -3.497 | opp_overlap 1847148 1847156, overlap 1847147 1847142 TCAAATGAATAAAAG GCCAGC ATTT GCTGGC TTTTTTTATGCCTGC TERM 1843 1847357 - 1847333 - T 79 -10.9 -3.15758 | opp_overlap 1847333, overlap 1847338 1847340 AGAATGGGGTATCAA TGCAACATATC TTC GATATATTGCA TTTAAGAGCGTTACA TERM 1844 1847333 - 1847357 + T 72 -8.7 -3.55622 | opp_overlap 1847333 1847338 1847340 AGAATGGGGTATCAA TGCAACATATC TTC GATATATTGCA TTTAAGAGCGTTACA Ssed_1546 1847596 - 1847387 - | TOBE domain-containing protein TERM 1845 1847695 - 1847672 - R 100 -11.8 -6.23545 | opp_overlap 1847671 1847670 TTTAAATAAAAAAAA TGCGCCACTT TTAG AAGTGACGCA CATTTAATAAATATT Ssed_1547 1848950 - 1847748 - | trans-2-enoyl-CoA reductase Ssed_1548 1849861 - 1849076 - | ABC transporter related TERM 1846 1849335 - 1849350 + gr 71 -4 -4.81249 | overlap 1849319 AGTGCCGTTAACGCC TCATCG GCAA TGATGA TTTTTGGATTTAGCA Ssed_1549 1850849 - 1849836 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1847 1850787 - 1850813 + gr 73 -9.4 -3.24017 | GACTCTTTCGAGTGC TTTGACTCGTCC GTG GGGCGTGTCAAG TTCGATTGTAAGGTT Ssed_1550 1851757 - 1850867 - | binding-protein-dependent transport systems inner membrane component Ssed_1551 1852775 - 1851744 - | binding-protein-dependent transport systems inner membrane component Ssed_1552 1854430 - 1852775 - | extracellular solute-binding protein Ssed_1553 1855572 - 1854505 - | sigma-54 dependent trancsriptional regulator Ssed_1554 1855750 - 1856433 + | phage shock protein A, PspA Ssed_1555 1856454 - 1856687 + | phage shock protein B TERM 1848 1856958 - 1856933 - g 82 -5.4 -5.06472 | overlap 1856934 AGATAAAGAAGAAAA TTTGGCAAGC GGGTGA GCCTGCCAAG ATGGCACTCAGGGAT TERM 1849 1856957 - 1856934 - g 71 -8.9 -3.61443 | overlap 1856933 GATAAAGAAGAAAAT TTGGCAAGC GGGTGA GCCTGCCAA GATGGCACTCAGGGA Ssed_1556 1856680 - 1857075 + | phage shock protein C, PspC Ssed_1557 1857125 - 1858579 + | protein of unknown function DUF463, YcjX family protein TERM 1850 1858890 - 1858875 - g 71 -4.6 -4.55128 | opp_overlap 1858889, overlap 1858876 ATGCCGAAAGTAAAA GGGGGA AGTC TCCCCG TCAACGACGTTGGTC Ssed_1558 1858670 - 1859776 + | hypothetical protein Ssed_1559 1859954 - 1861132 + | methionine gamma-lyase TERM 1851 1861210 - 1861181 - T 87 -8.5 -4.57073 | opp_overlap 1861185, overlap 1861183 1861185 CAGGCTTGCCAAAAA CACACGCCGCGCT TTCC AGCACGGCGTTTT TTTTATGGGAGTGTT TERM 1852 1861208 - 1861183 - T 86 -11.1 -3.90048 | opp_overlap 1861185, overlap 1861181 1861185 GGCTTGCCAAAAACA CACGCCGCGCT TTCC AGCACGGCGTT TTTTTTATGGGAGTG TERM 1853 1861206 - 1861185 - T 95 -13.7 -3.53855 | opp_overlap 1861185, overlap 1861183 1861181 CTTGCCAAAAACACA CGCCGCGCT TTCC AGCACGGCG TTTTTTTTATGGGAG TERM 1854 1861185 - 1861206 + T 100 -11.5 -5.93809 | opp_overlap 1861185 1861183 1861181 CTTGCCAAAAACACA CGCCGCGCT TTCC AGCACGGCG TTTTTTTTATGGGAG Ssed_1560 1862648 - 1861251 - | anion transporter Ssed_1561 1863047 - 1863364 + | helix-hairpin-helix repeat-containing competence protein ComEA Ssed_1562 1863997 - 1863728 - | hypothetical protein TERM 1855 1864350 - 1864371 + r 77 -9.4 -3.53761 | opp_overlap 1864350 GTTGAGAACTGATAA CGCCAGCT CGTAGT GGCTGGCG TTTCACAAGGACTTG TERM 1856 1864371 - 1864350 - R 72 -8.7 -3.45054 | opp_overlap 1864350 GTTGAGAACTGATAA CGCCAGC TCGTAGTG GCTGGCG TTTCACAAGGACTTG Ssed_1563 1865080 - 1864388 - | hypothetical protein Ssed_1564 1865799 - 1865131 - | primosomal replication protein N'', putative Ssed_1565 1866569 - 1865796 - | hypothetical protein Ssed_1566 1868656 - 1866578 - | ATP-dependent DNA helicase DinG TERM 1857 1868947 - 1868959 + G 73 -3.4 -4.84359 | TCAAAGTTCCCCAAG CAGA ATTCA TCTG TTTTTGTGCCAGTGC Ssed_1567 1868850 - 1871231 + | DNA polymerase II Ssed_1568 1871461 - 1872672 + | porin TERM 1858 1872699 - 1872713 + F 100 -8.5 -5.73563 | opp_overlap 1872699 TTAGCTTTTGAAAAA CGCCC CATGT GGGCG TTTTTTTGATTTAAT TERM 1859 1872713 - 1872699 - f 87 -8.5 -4.57569 | opp_overlap 1872699 TTAGCTTTTGAAAAA CGCCC CATGT GGGCG TTTTTTTGATTTAAT Ssed_1569 1873498 - 1876107 + | TonB-dependent receptor TERM 1860 1876130 - 1876143 + F 100 -8.1 -6.21477 | opp_overlap 1876130 ATTTAAGTTAAAAAA GACCC GTAA GGGTC TTTTTTTTTAGTGTT TERM 1861 1876143 - 1876130 - f 88 -8.1 -5.16572 | opp_overlap 1876130 ATTTAAGTTAAAAAA GACCC GTAA GGGTC TTTTTTTTTAGTGTT Ssed_1570 1876204 - 1877160 + | methyltransferase type 11 TERM 1862 1877205 - 1877221 + F 71 -5.1 -4.53853 | TTTAATGTTTAAGTT GACGTTA GTC TTACGTC TCTTTTTTTTGGAAT TERM 1863 1877559 - 1877576 + F 85 -8.5 -4.40804 | opp_overlap 1877569 TTAGACCGCTTCAAT TGTTGAC ACAG GTCAACA TTTTGTGAAATGATG Ssed_1571 1877755 - 1878537 + | hypothetical protein Ssed_1572 1878537 - 1879892 + | MotA/TolQ/ExbB proton channel Ssed_1573 1879892 - 1880416 + | MotA/TolQ/ExbB proton channel Ssed_1574 1880430 - 1880834 + | biopolymer transport protein ExbD/TolR Ssed_1575 1880836 - 1881456 + | TonB family protein Ssed_1576 1881459 - 1882718 + | tetratricopeptide domain-containing protein TERM 1864 1882750 - 1882735 - T 100 -11.8 -4.82901 | opp_overlap 1882735 TTCGTTCCAGAAAAA GGCCCC GAAA GGGGCC TTTTTTTTAACCAAA TERM 1865 1882735 - 1882750 + T 100 -11.8 -5.75342 | opp_overlap 1882735 TTCGTTCCAGAAAAA GGCCCC GAAA GGGGCC TTTTTTTTAACCAAA Ssed_1577 1883292 - 1882783 - | diguanylate cyclase Ssed_1578 1883416 - 1885266 + | hypothetical protein TERM 1866 1885314 - 1885348 + F 85 -5.8 -5.33921 | TATTAAACCTTTTTT TAAACCCAGCGAATGT TTT ATACTAGTTGGGTTTA TTTTTTAGTTCATTT Ssed_1579 1885416 - 1885694 + | PpiC-type peptidyl-prolyl cis-trans isomerase Ssed_1580 1885720 - 1886256 + | GCN5-related N-acetyltransferase Ssed_1581 1886418 - 1886651 + | RNA-binding S4 domain-containing protein Ssed_1582 1886669 - 1887055 + | hypothetical protein TERM 1867 1887221 - 1887234 + F 89 -4.5 -5.65177 | TTTTGAAATGAAGCC GCCAT TTGA GTGGC TTTTTTTATGCCTGT Ssed_1583 1887329 - 1889299 + | hypothetical protein TERM 1868 1889345 - 1889321 - T 100 -15.8 -2.73364 | opp_overlap 1889321, overlap 1889326 CTCTGATGCTAACGA GGAGAGGCTC TGTTT GAGCCTCTCC TTTTTTATGGTTGAA TERM 1869 1889321 - 1889345 + T 100 -15.8 -5.37345 | opp_overlap 1889321 1889326 CTCTGATGCTAACGA GGAGAGGCTC TGTTT GAGCCTCTCC TTTTTTATGGTTGAA Ssed_1584 1890262 - 1889375 - | LysR family transcriptional regulator TERM 1870 1890130 - 1890109 - G 81 -3.7 -5.40072 | GTTGCCTTAAAAAAA GAGGAACAC CCAG ATACTCCTC TAAGCCTCTTATCTG Ssed_1585 1890409 - 1891188 + | permease TERM 1871 1891191 - 1891222 + T 84 -2.2 -5.85244 | overlap 1891196 1891199 TTCCTGGCTATAGAC TTTGGGCAGCCTTC GAAT GAAGGCTGGTTGCA TTTTTTGTTTTGGTT TERM 1872 1891196 - 1891217 + T 72 -8.7 -3.59223 | overlap 1891191 1891199 GGCTATAGACTTTGG GCAGCCTTC GAAT GAAGGCTGG TTGCATTTTTTGTTT TERM 1873 1892064 - 1892030 - T 79 -10.1 -3.48558 | overlap 1892022 1892020 ATAAACACCAATGAA GCTTTGGTACTCAGC ATGCA GCCAAGTACCAAATC AGCCCAATGAAACAA Ssed_1586 1893353 - 1892094 - | valine--pyruvate transaminase Ssed_1587 1894928 - 1893672 - | hypothetical protein Ssed_1588 1895262 - 1896407 + | nuclease SbcCD, D subunit TERM 1874 1896752 - 1896739 - g 72 -5.9 -4.41548 | opp_overlap 1896739 TTACACGGTACAAAA GCCGG AGGC CCAGC TGTATCGAGTCGATA TERM 1875 1897979 - 1897961 - g 74 -11 -2.80796 | overlap 1897960 GCTGAGCATCCAAAC CCTGCCCA TAG TGAGCAGG TACTGCCGACAGAAG Ssed_1589 1896404 - 1899460 + | exonuclease SbcC, putative TERM 1876 1899556 - 1899587 + F 100 -16.2 -2.77862 | opp_overlap 1899566, overlap 1899554 1899552 1899566 TTATTTCCTACTCTT GTGACATTAAGAAT AATT ATTCTTAATGTCAC TCATATATTCATATC Ssed_1590 1899859 - 1901133 + | peptidase M23B TERM 1877 1901162 - 1901181 + F 93 -10.7 -4.9792 | opp_overlap 1901162 TTATTATGTCCAATA CGCCAGC CTAGTC GCTGGCG TTTTTATCTCCGCTA TERM 1878 1901181 - 1901162 - f 78 -10.7 -3.04792 | opp_overlap 1901162 TTATTATGTCCAATA CGCCAGC CTAGTC GCTGGCG TTTTTATCTCCGCTA TERM 1879 1902119 - 1902146 + G 82 -12.2 -3.16742 | overlap 1902124 CTCCCGAGTCTGAAT TTGAACCTGAAG CGGA TTTCAGGTTCAA TTAGTAAACCTTAAC Ssed_1591 1901458 - 1902150 + | amino acid ABC transporter periplasmic protein Ssed_1592 1902650 - 1902147 - | hypothetical protein TERM 1880 1902950 - 1902966 + r 72 -9.4 -2.96695 | opp_overlap 1902950, overlap 1902947 ATGGGGTAAAAAAAA GGGTGC AAATA GCACCC TGATTTCATGACAAA TERM 1881 1902966 - 1902950 - R 100 -9.4 -5.75945 | opp_overlap 1902947 1902950 ATGGGGTAAAAAAAA GGGTGC AAATA GCACCC TGATTTCATGACAAA Ssed_1593 1903444 - 1902998 - | hypothetical protein Ssed_1594 1904969 - 1903572 - | DEAD/DEAH box helicase domain-containing protein TERM 1882 1904771 - 1904751 - G 77 -3.9 -5.06414 | opp_overlap 1904751 1904752, overlap 1904752 TGCCGGTAACAAAAA CGCTAAGGT TTT ACCTGAGCC TGTTTTTGATGATGC Ssed_1595 1905177 - 1906109 + | patatin TERM 1883 1906132 - 1906146 + T 87 -8.5 -4.48903 | opp_overlap 1906132, overlap 1906127 CTCAAATAGCAAAAA GGGCC CGTTA GGCCC TTTTCCTCTCTTTTA TERM 1884 1906146 - 1906132 - T 90 -9.2 -4.93696 | opp_overlap 1906132 1906127 CTCAAATAGCAAAAA GGGCCC GTT AGGCCC TTTTCCTCTCTTTTA Ssed_1596 1907186 - 1906188 - | alcohol dehydrogenase Ssed_1597 1907426 - 1907908 + | MarR family transcriptional regulator Ssed_1598 1908466 - 1908978 + | hypothetical protein Ssed_1599 1909199 - 1909921 + | hypothetical protein TERM 1885 1910001 - 1910026 + F 93 -9.9 -5.12916 | gap 1, opp_overlap 1910006 AAGGGTCAAATCGGA GATAAGTGGCCT CAT AGGC-ACTTATC TTTTGTTCTTTTCTC TERM 1886 1911541 - 1911531 - g 71 -6.8 -4.1585 | TTAGAAGGTGTAAAA GCCA GAG TGGC GCCCATCCTTTATAT Ssed_1600 1910178 - 1912295 + | anaerobic ribonucleoside triphosphate reductase TERM 1887 1912344 - 1912373 + F 89 -9.3 -4.79384 | opp_overlap 1912347, overlap 1912345 CAGATGTCAACTTAT AGACGCAACTGAC CTGA GTGAGTTGCGTCA TTTTACTTTTGTTAT TERM 1888 1912345 - 1912372 + F 90 -12.8 -3.4519 | opp_overlap 1912347, overlap 1912344 AGATGTCAACTTATA GACGCAACTGAC CTGA GTGAGTTGCGTC ATTTTACTTTTGTTA TERM 1889 1912370 - 1912347 - f 72 -9.6 -2.95091 | opp_overlap 1912345 1912344 ATGTCAACTTATAGA CGCAACTGAC CTGA GTGAGTTGCG TCATTTTACTTTTGT Ssed_1601 1912492 - 1912956 + | anaerobic ribonucleotide reductase-activating protein TERM 1890 1913042 - 1913023 - f 74 -4.2 -5.11937 | opp_overlap 1913017 1913023 AAGAATTTTAAAAAA CAGCCGTA ATAT CAAGGCTG TTTTTGCATTTTATA TERM 1891 1913023 - 1913042 + F 70 -3.5 -4.89729 | opp_overlap 1913023, overlap 1913017 AAGAATTTTAAAAAA CAGCCGT AATATC AAGGCTG TTTTTGCATTTTATA Ssed_1602 1913078 - 1913434 + | hypothetical protein TERM 1892 1913497 - 1913524 + F 70 -8.5 -3.36505 | gap 1 AAATTATTTTGTTGT CGCCACGCGTAT CCTTC GTACGC-TGGCG TTGTGAGTCAACTAT TERM 1893 1913622 - 1913608 - f 72 -4.3 -4.82548 | TAAAAACACATAAAA TACTC CGCCT GAGTA CGAGACAGAATTAAT Ssed_1603 1913730 - 1914347 + | GTP cyclohydrolase II Ssed_1604 1914419 - 1915237 + | hypothetical protein Ssed_1605 1916148 - 1915261 - | LysR family transcriptional regulator Ssed_1606 1916292 - 1917269 + | putative adh_zinc, zinc-binding dehydrogenase Ssed_1607 1917303 - 1918022 + | short-chain dehydrogenase/reductase SDR Ssed_1608 1919637 - 1918105 - | XRE family transcriptional regulator Ssed_1609 1919845 - 1920363 + | malate synthase TERM 1894 1920429 - 1920468 + T 100 -13 -5.26247 | opp_overlap 1920436, overlap 1920431 1920436 TTAAATTAAAACAGA TTAAAAAGGGCCGAAAGT ATTT ACTTTCGGCCCTTTTAGC TTTTGTTTATTTTCC TERM 1895 1920431 - 1920466 + T 100 -17.8 -2.81545 | opp_overlap 1920436, overlap 1920429 1920436 AAATTAAAACAGATT AAAAAGGGCCGAAAGT ATTT ACTTTCGGCCCTTTTA GCTTTTGTTTATTTT TERM 1896 1920436 - 1920461 + T 100 -17.7 -4.49716 | opp_overlap 1920436, overlap 1920431 1920429 AAAACAGATTAAAAA GGGCCGAAAGT ATTT ACTTTCGGCCC TTTTAGCTTTTGTTT TERM 1897 1920461 - 1920436 - T 100 -17.7 -4.91573 | opp_overlap 1920436 1920431 1920429 AAAACAGATTAAAAA GGGCCGAAAGT ATTT ACTTTCGGCCC TTTTAGCTTTTGTTT Ssed_1610 1920831 - 1920475 - | hypothetical protein TERM 1898 1920921 - 1920940 + r 73 -7.8 -3.81137 | opp_overlap 1920923, overlap 1920923 TTAACTTTAATGAAA AAGAGGGC GTGA GCCCTCTC TTTGGCTGTTTCAAC TERM 1899 1920938 - 1920923 - R 93 -10.4 -4.87893 | opp_overlap 1920921 1920923 AACTTTAATGAAAAA GAGGGC GTGA GCCCTC TCTTTGGCTGTTTCA TERM 1900 1920923 - 1920938 + r 79 -10.4 -3.48657 | opp_overlap 1920923, overlap 1920921 AACTTTAATGAAAAA GAGGGC GTGA GCCCTC TCTTTGGCTGTTTCA Ssed_1611 1923367 - 1920959 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 1901 1923550 - 1923564 + r 79 -8.6 -4.13014 | opp_overlap 1923549 1923547 1923550 1923561 TTACTGAATAAATAT TGCGTT TAA AACGCA TTTTACGCGTATGAA TERM 1902 1923982 - 1923951 - R 100 -16 -3.10112 | opp_overlap 1923953 ACCTAAGTTAGGCAA CTGGCTGGACATCA GGCC TGATCTCCAGCCAG AAGTTAGAATGCTAC Ssed_1612 1924392 - 1923994 - | rhodanese domain-containing protein Ssed_1613 1924720 - 1924502 - | hypothetical protein Ssed_1614 1928097 - 1924798 - | acriflavin resistance protein Ssed_1615 1929151 - 1928108 - | RND family efflux transporter MFP subunit TERM 1903 1929272 - 1929258 - R 100 -10 -5.72622 | opp_overlap 1929258 GGGAGAAATAAAAAA GGAGTC ATT GACTCC TTAATTCGGCTAACT TERM 1904 1929258 - 1929272 + r 77 -10 -3.35992 | opp_overlap 1929258 GGGAGAAATAAAAAA GGAGTC ATT GACTCC TTAATTCGGCTAACT Ssed_1616 1930027 - 1929311 - | hypothetical protein Ssed_1617 1930494 - 1930111 - | hypothetical protein TERM 1905 1930577 - 1930559 - R 100 -14.6 -5.4588 | opp_overlap 1930559 TAAAAGTACAAAAAA GCCGCACT GTG AGTGCGGC TTATAATACCGATTG TERM 1906 1930559 - 1930577 + r 100 -14.6 -3.41527 | opp_overlap 1930559 TAAAAGTACAAAAAA GCCGCACT GTG AGTGCGGC TTATAATACCGATTG Ssed_1618 1931949 - 1930627 - | membrane protein involved in aromatic hydrocarbon degradation TERM 1907 1930725 - 1930703 - G 71 -7 -4.04474 | overlap 1930704 1930724 ACATCGCCAGACAAA CCTGGGATAG CTT CTATCACAGA GCTATGCTCGGTAAC TERM 1908 1932252 - 1932283 + r 95 -11.8 -4.29738 | opp_overlap 1932254 1932258, overlap 1932254 1932258 ATATAGAAAGAGGTA AATAAATAGCGTAC ACGT GTACGCTATTTATG TTTTCATCGCTCTGA TERM 1909 1932281 - 1932254 - R 100 -14.4 -3.83927 | opp_overlap 1932252 1932254 1932258, overlap 1932258 ATAGAAAGAGGTAAA TAAATAGCGTAC ACGT GTACGCTATTTA TGTTTTCATCGCTCT TERM 1910 1932254 - 1932281 + r 100 -14.4 -3.74902 | opp_overlap 1932254 1932258, overlap 1932252 1932258 ATAGAAAGAGGTAAA TAAATAGCGTAC ACGT GTACGCTATTTA TGTTTTCATCGCTCT TERM 1911 1932258 - 1932277 + r 91 -10.8 -4.48449 | opp_overlap 1932254 1932258, overlap 1932254 1932252 AAAGAGGTAAATAAA TAGCGTAC ACGT GTACGCTA TTTATGTTTTCATCG TERM 1912 1932277 - 1932258 - R 91 -10.8 -4.5081 | opp_overlap 1932258 1932254 1932252, overlap 1932254 AAAGAGGTAAATAAA TAGCGTAC ACGT GTACGCTA TTTATGTTTTCATCG Ssed_1619 1933768 - 1932317 - | sodium/proline symporter Ssed_1620 1934623 - 1933919 - | hypothetical protein Ssed_1621 1935179 - 1934616 - | RNA polymerase sigma factor TERM 1913 1935230 - 1935270 + r 100 -15 -3.05384 | opp_overlap 1935233, overlap 1935233 TAACGTGCTGGCGAT GAATGGCAAGAAGTTAAT AACAA GTTAACTTCTTGCCATGC TTGGATAAAGAACAA TERM 1914 1935233 - 1935267 + r 95 -15.3 -2.75064 | opp_overlap 1935233, overlap 1935230 CGTGCTGGCGATGAA TGGCAAGAAGTTAAT AACAA GTTAACTTCTTGCCA TGCTTGGATAAAGAA TERM 1915 1935267 - 1935233 - R 100 -14.6 -3.14132 | opp_overlap 1935230 1935233 CGTGCTGGCGATGAA TGGCAAGAAGTTAA TAACAAG TTAACTTCTTGCCA TGCTTGGATAAAGAA Ssed_1622 1936921 - 1935287 - | hypothetical protein Ssed_1623 1938938 - 1937004 - | TPR repeat-containing protein TERM 1916 1938058 - 1938019 - G 71 -6.4 -4.29829 | gap 1, opp_overlap 1938043, overlap 1938020 1938027 1938028 ATAAGCAGCAACAAA GCGATGA-ATGGTCCGGCA TCT TGCCAGACCTCACCATCGA GTTCTGTTGCTTTCG TERM 1917 1938057 - 1938020 - G 70 -9.9 -3.16813 | gap 1, opp_overlap 1938043, overlap 1938019 1938027 1938028 TAAGCAGCAACAAAG CGATGA-ATGGTCCGGCA TCT TGCCAGACCTCACCATCG AGTTCTGTTGCTTTC TERM 1918 1938049 - 1938027 - G 73 -9.8 -3.27617 | opp_overlap 1938043, overlap 1938020 1938019 1938028 CAACAAAGCGATGAA TGGTCCGGCA TCT TGCCAGACCT CACCATCGAGTTCTG TERM 1919 1938048 - 1938028 - G 84 -13.3 -2.55847 | opp_overlap 1938043, overlap 1938027 1938020 1938019 AACAAAGCGATGAAT GGTCCGGCA TCT TGCCAGACC TCACCATCGAGTTCT Ssed_1624 1939933 - 1938941 - | von Willebrand factor, type A TERM 1920 1939316 - 1939337 + g 73 -8.7 -3.91716 | AATGGCCGCCGCCTG CTCCGGC GAGATGGA GCCGGAG TTGTTTGAACCATCG Ssed_1625 1940442 - 1939927 - | hypothetical protein Ssed_1626 1941371 - 1940442 - | hypothetical protein TERM 1921 1940617 - 1940651 + g 74 -10.9 -3.08133 | gap 1 TTGCCTTCCTTGACC GGTA-ACTGGAATTGC TTTG GCAATGCCAGTGTACC TTGCCTCAGTGGATC Ssed_1627 1942328 - 1941372 - | ATPase Ssed_1628 1942774 - 1944084 + | 3-ketoacyl-CoA thiolase TERM 1922 1944736 - 1944725 - g 74 -4.4 -4.95854 | TAAAAAAGTGAAAAA GTCA TTAG TGAC CCGCCTGCTTGAGGG TERM 1923 1945262 - 1945248 - g 72 -5.7 -4.31766 | ACGACAGAATATAAA GGCAT TAAAG ATGCC GATATCGTCGTTGAA Ssed_1629 1944090 - 1946237 + | multifunctional fatty acid oxidation complex subunit alpha TERM 1924 1946292 - 1946273 - f 76 -9.3 -3.72324 | opp_overlap 1946273 1946284 GAGTTTTATTAACAA TGCGGCA ACATGG TGCCGCA TTTTTTTGTCCGGAA TERM 1925 1946273 - 1946292 + F 100 -9.3 -5.60993 | opp_overlap 1946273, overlap 1946284 GAGTTTTATTAACAA TGCGGCA ACATGG TGCCGCA TTTTTTTGTCCGGAA Ssed_1630 1946507 - 1946731 + | hypothetical protein TERM 1926 1946842 - 1946813 - T 100 -13.7 -4.21945 | opp_overlap 1946820, overlap 1946820 AGTAAGAGATAGAAA CTAAAAAGGAGCC AATA GGCTCCTTTTTTG ATCTGTATATTATTG TERM 1927 1946835 - 1946820 - T 93 -10.4 -5.07011 | opp_overlap 1946820, overlap 1946813 GATAGAAACTAAAAA GGAGCC AATA GGCTCC TTTTTTGATCTGTAT TERM 1928 1946820 - 1946835 + T 100 -10.4 -5.25893 | opp_overlap 1946820 1946813 GATAGAAACTAAAAA GGAGCC AATA GGCTCC TTTTTTGATCTGTAT Ssed_1631 1946984 - 1946865 - | hypothetical protein Ssed_1632 1947608 - 1947003 - | hypothetical protein Ssed_1633 1952095 - 1947752 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 1929 1951424 - 1951441 + g 71 -4.9 -4.58466 | AGATGCTGTTGGAAG CAAAGTG GCTA CATTTTG TTTTATACTTATAAC TERM 1930 1952455 - 1952426 - R 82 -10.9 -3.58726 | gap 1, opp_overlap 1952429, overlap 1952429 GTGTGGGAGAGAGAA CAAGCAGTG-CTGT TTG ACAGACACTGCTTA TAAACTTCTTTTGTT TERM 1931 1952429 - 1952452 + r 77 -10.4 -3.41422 | gap 1, opp_overlap 1952426 1952429 TGGGAGAGAGAACAA GCAGTG-CTGT TTG ACAGACACTGC TTATAAACTTCTTTT TERM 1932 1952452 - 1952429 - R 84 -10.4 -3.92996 | gap 1, opp_overlap 1952429, overlap 1952426 TGGGAGAGAGAACAA GCAGTG-CTGT TTG ACAGACACTGC TTATAAACTTCTTTT Ssed_1634 1955311 - 1952522 - | peptidase M16 domain-containing protein Ssed_1635 1955580 - 1956068 + | phosphohistidine phosphatase, SixA Ssed_1636 1956860 - 1956330 - | hypothetical protein Ssed_1637 1957036 - 1957980 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 1933 1958000 - 1958041 + F 70 -8.9 -3.13403 | opp_overlap 1958011, overlap 1958011 CACTGAGTCATACTG GTGATAAAAAAGGCTAACG AATA TGTTAGCCTTTTTTAATTC TGTTACTCAAAGCCC TERM 1934 1958011 - 1958030 + F 95 -8.6 -5.3671 | opp_overlap 1958011, overlap 1958000 ACTGGTGATAAAAAA GGCTAACG AATA TGTTAGCC TTTTTTAATTCTGTT TERM 1935 1958030 - 1958011 - f 91 -7.9 -5.24531 | opp_overlap 1958011 1958000 ACTGGTGATAAAAAA GGCTAAC GAATAT GTTAGCC TTTTTTAATTCTGTT TERM 1936 1958579 - 1958558 - g 73 -2.3 -5.02074 | GCAGTGGCCAAAAAA TACCTTAAA CAAG TTCATGGTA TTGAAATTAACGGCT Ssed_1638 1958129 - 1959223 + | chorismate synthase TERM 1937 1959264 - 1959278 + F 100 -11.4 -5.68039 | opp_overlap 1959264 ACACTCTCGATTGAA GGCGCA TCT TGCGCC TTTTTTTATGCCTTT TERM 1938 1959278 - 1959264 - f 81 -11.4 -3.05935 | opp_overlap 1959264 ACACTCTCGATTGAA GGCGCA TCT TGCGCC TTTTTTTATGCCTTT TERM 1939 1960091 - 1960101 + G 79 -3.2 -5.20216 | CAGATGAGTGCCGGG CCGT TTT ATGG TTTTTTCGTACTCTA Ssed_1639 1959434 - 1960591 + | major facilitator transporter Ssed_1640 1960677 - 1961801 + | hypothetical protein Ssed_1641 1961866 - 1962135 + | hypothetical protein Ssed_1642 1962152 - 1962685 + | tRNA/rRNA methyltransferase (SpoU) TERM 1940 1962722 - 1962705 - T 100 -12.7 -4.64048 | opp_overlap 1962705 GAGTACAGAAATAAA CCCGGCT AATC AGCCGGG TTTTGTTTATCTGAT TERM 1941 1962705 - 1962722 + T 100 -12.7 -5.06016 | opp_overlap 1962705 GAGTACAGAAATAAA CCCGGCT AATC AGCCGGG TTTTGTTTATCTGAT Ssed_1643 1964920 - 1962782 - | FAD dependent oxidoreductase TERM 1942 1964126 - 1964145 + g 72 -10.7 -2.57468 | overlap 1964125 AAACTTGTCTGATTG GGCGTGC CTTAAC GCACGCC GTTCCTGTAGTGGGA TERM 1943 1964701 - 1964717 + g 87 -6.5 -5.1675 | AAATTTTTATGTTTA CGGCTCT CGA AGGGCTG TTTTTTCGTAAATAA TERM 1944 1966202 - 1966217 + G 78 -9 -4.00868 | overlap 1966208 ACAGTTTTGGTTTCG GTGGCA CCAA TGCCAC TTTGGTTATGCGTAA Ssed_1644 1965031 - 1966242 + | beta-ketoacyl synthase TERM 1945 1966307 - 1966322 + T 100 -10.4 -5.36441 | opp_overlap 1966307 AACGCGGCATAGAGA GGGAGC TTAG GCTCCC TTTTTTGTGTCCGGC TERM 1946 1966322 - 1966307 - T 75 -10.4 -2.99319 | opp_overlap 1966307 AACGCGGCATAGAGA GGGAGC TTAG GCTCCC TTTTTTGTGTCCGGC Ssed_1645 1967552 - 1966518 - | hypothetical protein Ssed_1646 1968121 - 1967540 - | protein-glutamate methylesterase Ssed_1647 1968964 - 1968125 - | protein-glutamate O-methyltransferase TERM 1947 1968499 - 1968512 + g 83 -6.7 -4.93595 | GGCGTACCACATCCA TGGGA TAAA TCCCA TTTTTGGCTTTTTCT Ssed_1648 1973090 - 1968966 - | histidine kinase TERM 1948 1971254 - 1971272 + g 74 -9.6 -3.452 | overlap 1971268 CGCGAAGTTCTTCCT GTTGAGCT TGT AGCTCAGC TTCTGACTCTTTAAG TERM 1949 1972243 - 1972232 - G 72 -5.8 -4.45077 | TAAAAACGACTAAAA CAGG ATGG CCTG AACTATCAACATAGG Ssed_1649 1973396 - 1974559 + | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region Ssed_1650 1974562 - 1975578 + | aspartate-semialdehyde dehydrogenase TERM 1950 1975592 - 1975620 + F 79 -9.8 -3.64703 | gap 1, opp_overlap 1975594 GATCTACGCCCCATA TAGGCCAGATTTA ACCA TAAATC-GGCCTA TTTAGATGAAAAAGC TERM 1951 1975650 - 1975634 - f 100 -12.3 -4.81551 | opp_overlap 1975634 TATTTAGATGAAAAA GCCTGCA ACT TGCAGGC TTTTTTTGTATTAGC TERM 1952 1975634 - 1975650 + F 100 -12.3 -5.80817 | opp_overlap 1975634 TATTTAGATGAAAAA GCCTGCA ACT TGCAGGC TTTTTTTGTATTAGC TERM 1953 1976575 - 1976557 - g 73 -7.4 -4.21471 | ATGTTAAAAGAACAA GTTGCCAC AAT GCAGCAAC CAGAGGTCGAAGAGG TERM 1954 1978291 - 1978277 - g 83 -2.1 -5.64421 | gap 1 ATGCCAAAGAAAAAA CCG-TG TCAC CAGCGG TAGAGGTTGCGGAGC Ssed_1651 1975792 - 1978629 + | hypothetical protein TERM 1955 1978668 - 1978652 - f 91 -10.8 -4.57073 | opp_overlap 1978652 TACTCTTTCTAAAAA CGGCGC TTAAC GCGCCG TTTTTTATTATGGGA TERM 1956 1978652 - 1978668 + F 100 -10.8 -5.55769 | opp_overlap 1978652 TACTCTTTCTAAAAA CGGCGC TTAAC GCGCCG TTTTTTATTATGGGA TERM 1957 1979246 - 1979256 + G 71 -6.8 -4.15044 | opp_overlap 1979237 ATATCATGCACCAGG CTGC ACA GCAG TTTGTTGGAGAGCAC Ssed_1652 1978822 - 1979607 + | tRNA-pseudouridine synthase I Ssed_1653 1979683 - 1980948 + | dihydrofolate synthase TERM 1958 1981045 - 1981031 - f 73 -7.8 -3.82378 | overlap 1981032 ATTTACTTACAATAA CGCCAC ATC GTGGCA TAAATAGAGATGTTA TERM 1959 1981070 - 1981050 - f 77 -8.4 -3.86524 | opp_overlap 1981052 1981054 ACATCGTGGCATAAA TAGAGATG TTACG CATCTCTA TTAAAGGATAAAAAA Ssed_1654 1981086 - 1981706 + | sporulation domain-containing protein TERM 1960 1982007 - 1982024 + G 85 -7.7 -4.82901 | overlap 1982000 AGATGCTCCGCAATG GTGTCGC TATA GCGATAC TTTTTGTCGCGACAC TERM 1961 1982158 - 1982170 + G 80 -4.1 -5.28778 | GGGCGCCTTAATTGT GAGTG CTT TACTC TTTTTTATGGATGCT Ssed_1655 1981820 - 1982308 + | colicin V production protein Ssed_1656 1982410 - 1983924 + | amidophosphoribosyltransferase TERM 1962 1983989 - 1984013 + F 81 -5.7 -5.14563 | opp_overlap 1983989 GGTGAGTTAAGTAAA GCCAGTTTC CTTAATC GGAGCTGGC TTTTTTAATGCCCCA Ssed_1657 1984188 - 1984664 + | hypothetical protein Ssed_1658 1984830 - 1986869 + | DNA topoisomerase III Ssed_1659 1987086 - 1986886 - | hypothetical protein Ssed_1660 1987629 - 1988495 + | hypothetical protein Ssed_1661 1990565 - 1989276 - | alpha/beta hydrolase fold Ssed_1662 1990806 - 1991477 + | beta-lactamase domain-containing protein TERM 1963 1991544 - 1991583 + F 73 -10.2 -2.90212 | opp_overlap 1991553, overlap 1991553 ATTCGATTGATATAC CAGAGATAAGCCATGACT TGTG AGTTATGGCTTTTTTTTG TCTGTCCCGTCCTGA TERM 1964 1991553 - 1991574 + F 100 -9.5 -6.06529 | opp_overlap 1991553, overlap 1991544 ATATACCAGAGATAA GCCATGACT TGTG AGTTATGGC TTTTTTTTGTCTGTC Ssed_1663 1991813 - 1992325 + | hypothetical protein TERM 1965 1993755 - 1993739 - g 70 -8.1 -3.89524 | AGGCCACCGTAGAAA TTCAATC TAT GATTGAA GGGTTACAGACGGGT Ssed_1664 1992640 - 1994088 + | methyl-accepting chemotaxis sensory transducer TERM 1966 1994159 - 1994131 - T 100 -14.7 -4.7497 | opp_overlap 1994131 TTTAGCGAGCAAAAA CGCCCCTTGTT TCTTTCG AACAAGGGGCG TTTTTATTTTGGTTG TERM 1967 1994131 - 1994159 + T 100 -15.4 -5.54338 | opp_overlap 1994131 TTTAGCGAGCAAAAA CGCCCCTTGTTT CTTTC GAACAAGGGGCG TTTTTATTTTGGTTG TERM 1968 1994326 - 1994342 + T 82 -7.9 -4.65895 | opp_overlap 1994326, overlap 1994328 TCGGATGCGCTAAAA CTCGCCT GTT AGGCGTG TTTTTGGCTGCCCAC TERM 1969 1994342 - 1994326 - T 75 -7.9 -4.09685 | opp_overlap 1994326 1994328 TCGGATGCGCTAAAA CTCGCCT GTT AGGCGTG TTTTTGGCTGCCCAC TERM 1970 1994328 - 1994340 + T 79 -9.1 -3.94812 | opp_overlap 1994326, overlap 1994326 GGATGCGCTAAAACT CGCCT GTT AGGCG TGTTTTTGGCTGCCC Ssed_1665 1996484 - 1994466 - | NADH:flavin oxidoreductase/NADH oxidase TERM 1971 1996787 - 1996777 - g 70 -2.4 -4.91511 | opp_overlap 1996777 ACTGCATTACAAAAA GTGG TGC CCCC TGGCTTGGGTTGGTG Ssed_1666 1996593 - 1997675 + | helix-turn-helix-domain-containing protein TERM 1972 1997681 - 1997715 + T 79 -8.7 -4.11484 | gap 1, opp_overlap 1997680 1997678 AAACGAATAAATTAT TATCAGCCTGGTCTCA CCTA TGAG-TCAGGCTGACA TTTTAACGGGTTCGG Ssed_1667 1999426 - 1997705 - | long-chain-fatty-acid--CoA ligase TERM 1973 1999782 - 1999739 - R 71 -6.8 -4.11216 | gap 1, overlap 1999741 1999743 GCTGGATGTTTAAAA GAGAGGGTCTATAGCCGGT GATTGAA ACTGGCTATAAACCC-CGC AGATGTTTCATTCGA TERM 1974 1999780 - 1999741 - R 70 -8 -3.65542 | gap 1, overlap 1999739 1999743 TGGATGTTTAAAAGA GAGGGTCTATAGCCGGT GATTGAA ACTGGCTATAAACCC-C GCAGATGTTTCATTC TERM 1975 1999779 - 1999743 - R 86 -11.7 -3.40622 | overlap 1999741 1999739 GATGTTTAAAAGAGA GGGTCTATAGCCGGT GATTGAA ACTGGCTATAAACCC CGCAGATGTTTCATT Ssed_1668 2000617 - 1999811 - | exonuclease III Ssed_1669 2000953 - 2000654 - | YciI-like protein Ssed_1670 2001565 - 2001014 - | intracellular septation protein A Ssed_1671 2003211 - 2001694 - | type II secretory pathway ATPase ExeA TERM 1976 2003509 - 2003536 + r 95 -15.7 -2.87881 | opp_overlap 2003509 TTGTATAAAATAAAA GGCCTGATAGC GACAAA GCTATCAGGCC TATATAAACAGCTTG TERM 1977 2003536 - 2003509 - R 100 -15.7 -5.18371 | opp_overlap 2003509 TTGTATAAAATAAAA GGCCTGATAGC GACAAA GCTATCAGGCC TATATAAACAGCTTG Ssed_1672 2005641 - 2003566 - | hypothetical protein TERM 1978 2003987 - 2004024 + g 80 -7.1 -4.63218 | gap 1, opp_overlap 2003995, overlap 2003989 2003990 AACTGGTTGGTCACA CCGA-CAAACATTACGCT TGC GGCGAAATGTTTGGTCAG TTTTGTTGCCGCCCA TERM 1979 2005611 - 2005623 + g 74 -4.1 -4.83518 | opp_overlap 2005611, overlap 2005606 2005604 TTGCTACCGCTAAAG CATGT TTG GCATG TTTTATCTTGTTGTT Ssed_1673 2007787 - 2005868 - | receptor, putative TERM 1980 2007756 - 2007768 + g 71 -4.9 -4.58698 | opp_overlap 2007756 GATAATAAGAGTAGA GTTAT TGC ATAAC TTATTTTTAATTTAG TERM 1981 2007819 - 2007833 + r 100 -5 -6.06723 | TGTTTGTACGTTAGA TACTGC TGG GTAGTA TTTTTTTTTGCGGAA TERM 1982 2007980 - 2007954 - R 73 -6.7 -4.18018 | gap 1, opp_overlap 2007954 GTGCTTTATTGAAAA GGCGATACT-AT ATAA ATAAGTACCGCC TTCATGATGAATCTA Ssed_1674 2008425 - 2008015 - | nickel-responsive regulator TERM 1983 2009244 - 2009228 - g 73 -5.1 -4.57569 | CCATTTTTTGAAAAA CTGATCA TAG TGTTCAG CGATGAGGAGAGCCG Ssed_1675 2008622 - 2010160 + | oligopeptide-binding protein OppA Ssed_1676 2010151 - 2011143 + | ABC-type dipeptide/oligopeptide/nickel transporter, permease component Ssed_1677 2011140 - 2011970 + | oligopeptide transport system permease protein OppC Ssed_1678 2011945 - 2012673 + | oligopeptide transport ATP-binding protein OppD Ssed_1679 2012657 - 2013247 + | putative dipeptide ABC transporter TERM 1984 2013270 - 2013299 + F 81 -11.6 -3.03619 | opp_overlap 2013266, overlap 2013267 2013272 TCTGAATCATAGTGA CAGTGTCAATCA ATGTCA TGATTGGCACTG TCTTCGACACTACTT Ssed_1680 2013538 - 2014743 + | metal dependent phosphohydrolase TERM 1985 2014810 - 2014781 - T 87 -12.3 -3.33737 | opp_overlap 2014787, overlap 2014787 GATCAACGCTTAGAA GAAAAATAGCGCC CGAA GGCGCTATTTTTT ATTGCCGAAACATCA TERM 1986 2014804 - 2014787 - T 100 -11.3 -5.18726 | opp_overlap 2014787, overlap 2014781 CGCTTAGAAGAAAAA TAGCGCC CGAA GGCGCTA TTTTTTATTGCCGAA TERM 1987 2014787 - 2014804 + T 100 -11.3 -5.4505 | opp_overlap 2014787 2014781 CGCTTAGAAGAAAAA TAGCGCC CGAA GGCGCTA TTTTTTATTGCCGAA Ssed_1681 2015652 - 2014834 - | tryptophan synthase subunit alpha Ssed_1682 2016862 - 2015639 - | tryptophan synthase subunit beta TERM 1988 2016941 - 2016890 - R 73 -7.3 -4.08064 | opp_overlap 2016902, overlap 2016893 AATTTCGGTTCAAAA TACCTCTGGTTATTGGACTCGAC CTTGAT GTCGAGTCCAATTCCTTGAGCTA ATGTTGACCATAATT TERM 1989 2016902 - 2016929 + r 100 -14.3 -3.36289 | opp_overlap 2016893 2016890 AAATACCTCTGGTTA TTGGACTCGAC CTTGAT GTCGAGTCCAA TTCCTTGAGCTAATG Ssed_1683 2018446 - 2017013 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 1990 2017156 - 2017170 + g 75 -11.4 -2.72459 | opp_overlap 2017152, overlap 2017155 CCGCAGTCAAACCTC CGGCCA ACA TGGCCG CTTGCTTATTCGGTA Ssed_1684 2019507 - 2018449 - | anthranilate phosphoribosyltransferase Ssed_1685 2020109 - 2019504 - | anthranilate synthase component II Ssed_1686 2021665 - 2020106 - | anthranilate synthase component I TERM 1991 2021606 - 2021635 + g 73 -8.6 -3.86835 | ATGCTGATACAAGCG GAGAGGATCGGC ATGATA GGTGATCCTCTC TTTACTCGTCTTTAC TERM 1992 2021766 - 2021748 - H 100 -14.6 -5.28176 | opp_overlap 2021748 TTCATGTACAAAAAA GCCCGCAT TCT ATGCGGGC TTCTTGTTGAATCTT TERM 1993 2021748 - 2021766 + H 100 -14.6 -3.98981 | opp_overlap 2021748 TTCATGTACAAAAAA GCCCGCAT TCT ATGCGGGC TTCTTGTTGAATCTT Ssed_1687 2022218 - 2023075 + | phosphotransferase domain-containing protein Ssed_1688 2023278 - 2023898 + | SUA5/YciO/YrdC/YwlC family protein Ssed_1689 2024010 - 2024798 + | chromosome segregation and condensation protein ScpA Ssed_1690 2024799 - 2025443 + | putative transcriptional regulator Ssed_1691 2025436 - 2026302 + | pseudouridine synthase TERM 1994 2026352 - 2026339 - T 71 -9.5 -2.8552 | opp_overlap 2026339, overlap 2026338 CTCTACCGATGAAAG GCCGC TAAT GCGGC TTTTTTTGTACCTGT TERM 1995 2026339 - 2026352 + T 100 -9.5 -5.65177 | opp_overlap 2026339 2026338 CTCTACCGATGAAAG GCCGC TAAT GCGGC TTTTTTTGTACCTGT TERM 1996 2026448 - 2026474 + T 71 -7.2 -3.90766 | TAGATGAAGGGTAAT GCCCTGAACAGA TAA TTAGTACAGGGC TTATATTTATGGGTA Ssed_1692 2027287 - 2026550 - | short chain dehydrogenase Ssed_1693 2027549 - 2030035 + | hypothetical protein TERM 1997 2030058 - 2030089 + F 83 -12.4 -2.58663 | opp_overlap 2030060 2030066, overlap 2030066 2030083 2030086 TAACTTATTGAACGA TATAAAAACCCGGC AGTA GCCGGGTTTTTTTG CTTATACCAATCGGT TERM 1998 2030087 - 2030060 - f 84 -12.8 -2.92371 | opp_overlap 2030058 2030066 2030083 2030086, overlap 2030066 ACTTATTGAACGATA TAAAAACCCGGC AGTA GCCGGGTTTTTT TGCTTATACCAATCG TERM 1999 2030081 - 2030066 - f 100 -11.8 -5.04175 | opp_overlap 2030058 2030066, overlap 2030060 TGAACGATATAAAAA CCCGGC AGTA GCCGGG TTTTTTTGCTTATAC TERM 2000 2030066 - 2030081 + F 100 -11.8 -5.68023 | opp_overlap 2030066 2030060, overlap 2030058 TGAACGATATAAAAA CCCGGC AGTA GCCGGG TTTTTTTGCTTATAC TERM 2001 2030373 - 2030396 + F 80 -4.6 -5.26875 | overlap 2030377 AATTTGTTATTAAGG TTAGGGCTGT TAGA ATAGCCGTAA TTTTTTGATTGAAAC Ssed_1694 2030438 - 2031469 + | putative periplasmic protease TERM 2002 2031493 - 2031509 + T 100 -12.3 -5.38951 | opp_overlap 2031493 GATTAGTATTTCAAA GCCTGCA TCT TGCAGGC TTTTTTGTATCAGTT TERM 2003 2031509 - 2031493 - T 90 -12.3 -3.62572 | opp_overlap 2031493 GATTAGTATTTCAAA GCCTGCA TCT TGCAGGC TTTTTTGTATCAGTT Ssed_1695 2032691 - 2031573 - | hypothetical protein TERM 2004 2032650 - 2032671 + g 83 -4.5 -5.2166 | overlap 2032653 CAGACTTAGTCCTAA GGTCATATT AGAT AATATGGTC TTTTTTGCCTTATTA Ssed_1696 2033391 - 2032795 - | arylesterase TERM 2005 2033668 - 2033680 + G 73 -3.3 -4.89966 | opp_overlap 2033668 GGCGGCTTTAAGAAA GCAGA AGG TCAGC TTTATTTTTCAGTCT Ssed_1697 2033408 - 2034160 + | ABC transporter related TERM 2006 2034887 - 2034915 + G 77 -4.5 -4.87626 | gap 1, opp_overlap 2034905, overlap 2034912 CCGGTGAATCTCCCA TCGC-CGATGCG GTGAAA CGCGCCGAGCGA TTTTTGCTATTGGCA Ssed_1698 2034160 - 2036631 + | hypothetical protein TERM 2007 2036691 - 2036665 - T 75 -9.4 -3.28791 | opp_overlap 2036668, overlap 2036668 ATGCTGTGTTGATAA GGAGGCTGTCTC ATT GAGACAGCCTTT TTTGTGGAGTGGATA TERM 2008 2036688 - 2036668 - T 95 -15.5 -2.82623 | opp_overlap 2036668, overlap 2036665 CTGTGTTGATAAGGA GGCTGTCTC ATT GAGACAGCC TTTTTTGTGGAGTGG TERM 2009 2036668 - 2036688 + T 100 -15.5 -5.26316 | opp_overlap 2036665 2036668 CTGTGTTGATAAGGA GGCTGTCTC ATT GAGACAGCC TTTTTTGTGGAGTGG Ssed_1699 2037631 - 2036708 - | hypothetical protein TERM 2010 2036940 - 2036958 + g 72 -11 -2.53382 | ACCGGGTTGGGGGAG GTGGCGTT ATA GACGCCAC TACATTCACCATGCT Ssed_1700 2037876 - 2038955 + | hypothetical protein TERM 2011 2039031 - 2039056 + G 71 -6.8 -4.18494 | TGAAGTGAGTAAAGT GGCGTTTGGC GAAGAG GCCAATCGTC TTTTCCATGGCCGTG TERM 2012 2039560 - 2039571 + G 75 -3.6 -5.03715 | TTAAACGATTTTCCG GCGG GCGC TCGC TTTTTTGGCCATGAT Ssed_1701 2038999 - 2039907 + | hypothetical protein TERM 2013 2039968 - 2039993 + T 100 -11.9 -4.67641 | opp_overlap 2039962 2039963 TAAAAGAGAGTGATA TCGCCTGCAAT TTTA AATGCAGGCGA TTTTCGTTTTAAGGT Ssed_1702 2040284 - 2040060 - | hypothetical protein TERM 2014 2040423 - 2040437 + r 76 -7.2 -4.30809 | opp_overlap 2040423 CAATCACATAAAAAA CTGAAA GAC TTTCAG TTTTGGTGGCTGTTA TERM 2015 2040437 - 2040423 - R 93 -7.2 -5.42131 | opp_overlap 2040423 CAATCACATAAAAAA CTGAAA GAC TTTCAG TTTTGGTGGCTGTTA TERM 2016 2040787 - 2040805 + r 100 -11.8 -5.79526 | opp_overlap 2040787 CGGCTGAGATAAAAA TAGCAACC TTA GGTTGCTA TTTTTTTTGAGCTAT TERM 2017 2040805 - 2040787 - R 100 -11.8 -4.96848 | opp_overlap 2040787 CGGCTGAGATAAAAA TAGCAACC TTA GGTTGCTA TTTTTTTTGAGCTAT Ssed_1703 2041289 - 2040858 - | hypothetical protein TERM 2018 2041208 - 2041189 - G 91 -4.2 -5.56568 | ATAGCATTAAAAAAA CCGAGAGA GACA TCTTCCGG AGTTCGTTTTGACTC TERM 2019 2041592 - 2041608 + r 100 -12.3 -5.4251 | opp_overlap 2041592 TTAGCGTAAAAAAAA GCCTGTC AAT GACAGGC TTTTTTATGTCTGGA TERM 2020 2041608 - 2041592 - R 100 -12.3 -5.78622 | opp_overlap 2041592 TTAGCGTAAAAAAAA GCCTGTC AAT GACAGGC TTTTTTATGTCTGGA Ssed_1704 2043839 - 2041698 - | phosphate acetyltransferase TERM 2021 2043895 - 2043921 + r 72 -9.4 -3.068 | overlap 2043889 CGCCTAACTGTTTGC TGCCGACCATTG TGT TGATGGCCGGCA TATACTTTACTTGCT Ssed_1705 2045127 - 2043928 - | acetate kinase Ssed_1706 2045322 - 2045765 + | hypothetical protein Ssed_1707 2046551 - 2045811 - | pyruvate formate lyase-activating enzyme 1 TERM 2022 2045951 - 2045963 + g 80 -6.3 -4.67168 | CGAGTTCGTGGTAGG GTAGA AGC TCTAC TTTTTCAACGTTTTT TERM 2023 2046601 - 2046573 - R 73 -10.4 -2.91276 | overlap 2046572 TCCTTCTTTATAAAT TGGGCTGTAC TAAATTACC GTACAGCCCA CATCACGCTTATAAT Ssed_1708 2048927 - 2046645 - | formate C-acetyltransferase TERM 2024 2048105 - 2048115 + g 71 -6.8 -4.28656 | opp_overlap 2048103 2048105, overlap 2048112 TACGACCAAGAGACA TGGC TGC GCCA TTTTGGCTCTTAACT TERM 2025 2049511 - 2049481 - R 100 -14.9 -3.81548 | gap 1 AAGTATAGAAGAGAA GGGCGAGGAATGAA GCAA TTCAT-CCTCGCCC GAAGCAGTTCCCAAA Ssed_1709 2051063 - 2049531 - | hypothetical protein TERM 2026 2049743 - 2049756 + g 75 -8.1 -4.30885 | opp_overlap 2049742 2049740, overlap 2049742 CAAAGATACAGATAC CAGCC GCTT GGCTG TTTTGAGTGTCTTTT TERM 2027 2050925 - 2050937 + g 70 -7.7 -3.86835 | CCGGAAGGTTTAATC CCCAA CGC TTGGG TTTCATGATCTTTAG TERM 2028 2053122 - 2053106 - g 72 -10.9 -2.66316 | opp_overlap 2053105 2053104 2053109, overlap 2053109 GGCGGTATTAGACGA CAAGCAG CGC CTGCTTG GGTTTGTGTCGCAGC Ssed_1710 2051994 - 2053469 + | formate/nitrite transporter TERM 2029 2053499 - 2053537 + T 100 -15.5 -3.79902 | gap 1, opp_overlap 2053505, overlap 2053505 AAACTGCTATCTCTG GAACAAGGGCTGCCTGAT TGAT ATC-GGCAGCCCTTTTTC TTAGTTTTGATTTCT TERM 2030 2053505 - 2053531 + T 100 -13.1 -5.28166 | gap 1, opp_overlap 2053505, overlap 2053499 CTATCTCTGGAACAA GGGCTGCCTGAT TGAT ATC-GGCAGCCC TTTTTCTTAGTTTTG TERM 2031 2053531 - 2053505 - T 95 -13.1 -3.62046 | gap 1, opp_overlap 2053505 2053499 CTATCTCTGGAACAA GGGCTGCCTGAT TGAT ATC-GGCAGCCC TTTTTCTTAGTTTTG Ssed_1711 2053657 - 2053538 - | LysR family transcriptional regulator Ssed_1712 2054660 - 2053749 - | LysR family transcriptional regulator Ssed_1713 2055029 - 2055220 + | hypothetical protein TERM 2032 2056401 - 2056428 + G 71 -2.6 -4.96848 | gap 1, overlap 2056415 ATAGTCTGGATTAAT CTGGCTGCATTCG GCG CGT-TGCAGGCGG TTTTTCTCTGGCCAA TERM 2033 2056434 - 2056455 + G 79 -2.1 -5.40474 | overlap 2056436 TTGCAGGCGGTTTTT CTCTGGCCA ATTA TTGCCGGCG TTTTTTTCAAAGAGT Ssed_1714 2055213 - 2056664 + | sodium/panthothenate symporter TERM 2034 2057340 - 2057350 + G 73 -4.6 -4.8048 | TATTCTCTTCTCTCT CGGT GGC GCCG TTTTTGGTATGGGAG Ssed_1715 2056843 - 2058384 + | hypothetical protein TERM 2035 2058579 - 2058542 - T 91 -12.9 -3.08867 | opp_overlap 2058552 2058568, overlap 2058552 CTAAGTTTCAATATA TCTAAAAAAACGGCATC TTGC GATGCCGTTTTTTATGA ATGAACGTTGCTAGT TERM 2036 2058552 - 2058569 + T 100 -11.3 -5.28176 | opp_overlap 2058542 2058552, overlap 2058568 ATATATCTAAAAAAA CGGCATC TTGC GATGCCG TTTTTTATGAATGAA TERM 2037 2058569 - 2058552 - T 100 -11.3 -5.51402 | opp_overlap 2058552 2058568, overlap 2058542 ATATATCTAAAAAAA CGGCATC TTGC GATGCCG TTTTTTATGAATGAA TERM 2038 2058768 - 2058756 - T 70 -9.1 -3.13899 | opp_overlap 2058755 2058754, overlap 2058754 AAGCTTCTAGCAATA CGCCT GAG AGGCG AGTTTTAGCGCTATG TERM 2039 2059008 - 2058973 - T 90 -12.8 -3.63569 | opp_overlap 2058982, overlap 2058975 2058982 GTAACGGTTTAATAA CATAAAAAACGGCATC AAAT GATGCCGTTTTTAATA CAAGTGAATACTTGC TERM 2040 2059006 - 2058975 - T 93 -13.2 -3.39556 | opp_overlap 2058982, overlap 2058973 2058982 AACGGTTTAATAACA TAAAAAACGGCATC AAAT GATGCCGTTTTTAA TACAAGTGAATACTT TERM 2041 2058982 - 2058999 + T 95 -11.3 -4.72986 | opp_overlap 2058975 2058973 2058982 TAATAACATAAAAAA CGGCATC AAAT GATGCCG TTTTTAATACAAGTG TERM 2042 2058999 - 2058982 - T 100 -11.3 -5.55695 | opp_overlap 2058982, overlap 2058975 2058973 TAATAACATAAAAAA CGGCATC AAAT GATGCCG TTTTTAATACAAGTG Ssed_1716 2061729 - 2059048 - | TonB-dependent receptor, plug TERM 2043 2061510 - 2061530 + g 76 -11.9 -2.78816 | opp_overlap 2061509 GTGCATCTTGAATAT TGGTGAAGC CTT GCTTCGCCA TATCATCAGCGCTCA TERM 2044 2061949 - 2061898 - R 74 -9 -3.55261 | gap 1, overlap 2061896 CTGCAATAAAAGAGA TACAGATCAAATTATTAC-CGCAAG GAA CACGCTCGTAACAATTTGATCCGTA AGCATTAACATTTGA TERM 2045 2062140 - 2062126 - R 100 -5 -5.89947 | TAAATTTAAAAAAAA TGTCTC GGT GAAACA AATTCACGATATTTG Ssed_1717 2063271 - 2062303 - | C4-dicarboxylate transporter/malic acid transport protein Ssed_1718 2064461 - 2063388 - | O-methyltransferase, putative TERM 2046 2064836 - 2064807 - R 79 -10.9 -3.1733 | opp_overlap 2064811, overlap 2064805 2064804 TCGGTTATAAAAGTA GGAACTTTCATTT CCAA AGATGAAAGTTCC TGTGACCAGTTCTCA Ssed_1719 2065314 - 2064883 - | CBS domain-containing protein TERM 2047 2065541 - 2065568 + H 79 -11.4 -2.58544 | opp_overlap 2065539, overlap 2065540 ATTTTGTTAGAGATG TTGTAGCTTCTC GGGG GAGAAGCCACAA GTTATCGCAATCAGC Ssed_1720 2065598 - 2066263 + | TetR family transcriptional regulator TERM 2048 2066590 - 2066618 + T 81 -11.9 -2.72379 | opp_overlap 2066591 2066596, overlap 2066596 CAGCAAGCCCAAAAA ATAAAACCCGAAT CAG ATTCGGGTTTTAC TCGTTAAAGCATTAA TERM 2049 2066617 - 2066591 - T 100 -15.4 -5.10029 | opp_overlap 2066590 2066596, overlap 2066596 AGCAAGCCCAAAAAA TAAAACCCGAAT CAG ATTCGGGTTTTA CTCGTTAAAGCATTA TERM 2050 2066596 - 2066612 + T 91 -10.9 -4.3534 | opp_overlap 2066591 2066596, overlap 2066590 GCCCAAAAAATAAAA CCCGAAT CAG ATTCGGG TTTTACTCGTTAAAG TERM 2051 2066612 - 2066596 - T 100 -10.9 -5.42198 | opp_overlap 2066596 2066590, overlap 2066591 GCCCAAAAAATAAAA CCCGAAT CAG ATTCGGG TTTTACTCGTTAAAG Ssed_1721 2067627 - 2066659 - | cysteine synthase A TERM 2052 2068149 - 2068136 - g 77 -3.8 -5.07275 | TGATACAGAGAAAAA GCCA TGAGCT TGGC AAAGTGTTGAAGTGG Ssed_1722 2067922 - 2069133 + | RDD domain-containing protein Ssed_1723 2069434 - 2070696 + | diguanylate cyclase Ssed_1724 2071614 - 2070700 - | transcriptional regulator TERM 2053 2071050 - 2071060 + g 73 -2.4 -5.14563 | ATCGAAAAATGGTTT CAGG TGT CCAG TTTTTTAATACCGGA Ssed_1725 2071652 - 2071921 + | hypothetical protein Ssed_1726 2071921 - 2072268 + | hypothetical protein TERM 2054 2072289 - 2072313 + F 85 -7.2 -4.98103 | opp_overlap 2072278, overlap 2072291 AGGATATCTTTCAGG CTCAGTAAGA TAAAT TCTTACTGTG TTTTATATTTTATTA TERM 2055 2072291 - 2072311 + F 79 -8.4 -4.07119 | opp_overlap 2072278, overlap 2072289 GATATCTTTCAGGCT CAGTAAGA TAAAT TCTTACTG TGTTTTATATTTTAT Ssed_1727 2072782 - 2073678 + | putative transcriptional activator Ssed_1728 2074734 - 2073730 - | hypothetical protein TERM 2056 2075261 - 2075237 - g 75 -7.7 -4.27463 | opp_overlap 2075237 GAACAAGAGAAACAA GCCGTCGACGA GAG TCGGCGTCAGC TATTAAAAATCGGTG Ssed_1729 2075216 - 2076634 + | tetrachloroethene dehalogenase Ssed_1730 2076650 - 2076925 + | hypothetical protein TERM 2057 2076939 - 2076965 + F 73 -6.7 -4.30978 | gap 1 GATCTCGTAAGATTG CGGCT-AAAGAT TTCT ATCTTTTGGCCG TTTTCATCAGTTGAG TERM 2058 2077508 - 2077488 - g 71 -3.9 -4.7173 | GACGATATCGAAAAA CATCTGATG GAG CTGCAGATG AACATAGTGATCAAT TERM 2059 2077736 - 2077702 - g 71 -7.1 -4.07568 | opp_overlap 2077728, overlap 2077685 2077703 2077707 TCTTGGGGGCGAAAA CCATAGCCCAGCTTA TCTAT CAAGCCGGGCTGTGC CGCTTAGTTTAATGA TERM 2060 2077735 - 2077703 - g 72 -10.6 -3.04398 | opp_overlap 2077728, overlap 2077702 2077707 CTTGGGGGCGAAAAC CATAGCCCAGCTTA TCTAT CAAGCCGGGCTGTG CCGCTTAGTTTAATG TERM 2061 2077731 - 2077707 - g 70 -10 -3.09823 | opp_overlap 2077728, overlap 2077703 2077702 GGGGCGAAAACCATA GCCCAGCTTA TCTAT CAAGCCGGGC TGTGCCGCTTAGTTT Ssed_1731 2077026 - 2077748 + | hypothetical protein Ssed_1732 2080233 - 2077861 - | hypothetical protein TERM 2062 2079526 - 2079547 + g 77 -8.7 -4.15698 | CCCCGTCGCTGTACC CAGCTGACA AAGC TGGCAGCTG TTATTTCTGTCGATC TERM 2063 2081383 - 2081395 + G 74 -9.1 -3.75738 | ACAGAGATATCGGCT GCCAG GGG CTGGC TTGTTGATGGTGATA Ssed_1733 2081041 - 2081436 + | hypothetical protein TERM 2064 2082129 - 2082112 - T 77 -8.4 -3.87952 | opp_overlap 2082125, overlap 2082108 CAATAAGAAAAGTAA CCGGAG ACGTTA CTCCGG CGCTATCTCCGGGTG Ssed_1734 2082894 - 2082121 - | putative sulfate transport protein CysZ Ssed_1735 2083099 - 2083998 + | chromosome segregation protein SMC TERM 2065 2085224 - 2085234 + G 71 -6.8 -4.25104 | opp_overlap 2085223 GCAGTATAAGTTAAC GCTC GAT GAGC TTTTGGTCACCCAAG Ssed_1736 2084070 - 2086514 + | chromosome segregation protein SMC Ssed_1737 2086538 - 2087563 + | cell division protein ZipA TERM 2066 2087609 - 2087624 + F 91 -11.8 -4.12941 | opp_overlap 2087594 2087609, overlap 2087602 GACCTATTTATAAAA GGCCGC CTTC GCGGCC TTTCTCATGTTTATT TERM 2067 2087624 - 2087609 - f 95 -11.8 -4.431 | opp_overlap 2087609 2087602, overlap 2087594 GACCTATTTATAAAA GGCCGC CTTC GCGGCC TTTCTCATGTTTATT Ssed_1738 2087653 - 2089665 + | DNA ligase (NAD(+)) TERM 2068 2089929 - 2089946 + G 79 -10.5 -3.6692 | opp_overlap 2089920 2089923, overlap 2089927 CACAATCGAGCGACC GCGCCGC ACTG GTGGCGC TCTTTTACCCTCAAA Ssed_1739 2089796 - 2090281 + | hypothetical protein TERM 2069 2090374 - 2090354 - f 100 -16.9 -5.71712 | GGTGAGATAAAAAAA GGCGCTGCA AAG TGCAGCGCC AAAGAATCATGTAAT TERM 2070 2090567 - 2090586 + F 73 -9.4 -3.12373 | opp_overlap 2090561 2090584, overlap 2090561 2090566 2090584 AACTATATATATCCC GGATATTG TATG CAATATCC ATTTTGGAGTATTTA Ssed_1740 2090939 - 2092144 + | metal dependent phosphohydrolase TERM 2071 2092536 - 2092555 + G 72 -10.8 -2.50816 | opp_overlap 2092536, overlap 2092520 2092535 GGTGCTTACCAGCAA CGTTTGAG TTTC CTCAAACG CTTGATGGCTCAGCA TERM 2072 2092555 - 2092536 - g 76 -10.8 -3.21099 | opp_overlap 2092520 2092536 2092535 GGTGCTTACCAGCAA CGTTTGAG TTTC CTCAAACG CTTGATGGCTCAGCA Ssed_1741 2092221 - 2093081 + | NAD-dependent epimerase/dehydratase Ssed_1742 2093116 - 2093748 + | DsbA oxidoreductase TERM 2073 2093789 - 2093806 + F 100 -12.7 -5.01845 | opp_overlap 2093789 ACTTTAATGAGTAAA GCCCGCA TTCT TGCGGGC TTTTTAGTTATTGTC TERM 2074 2093806 - 2093789 - f 93 -12.7 -3.84514 | opp_overlap 2093789 ACTTTAATGAGTAAA GCCCGCA TTCT TGCGGGC TTTTTAGTTATTGTC Ssed_1743 2094053 - 2094481 + | prophage MuSo1, positive regulator of late transcription, putative Ssed_1744 2094866 - 2095000 + | prophage MuSo1, protein Gp32, putative TERM 2075 2095145 - 2095176 + F 87 -12.4 -3.38786 | overlap 2095152 TCGTTGAGTACTTTT GTTGCAGGTTGACG CCGG CGTCAACTTTCAAC TTGCTGTTAAATATC TERM 2076 2095152 - 2095169 + F 79 -9.9 -3.69092 | overlap 2095145 GTACTTTTGTTGCAG GTTGACG CCGG CGTCAAC TTTCAACTTGCTGTT Ssed_1745 2095315 - 2095581 + | hypothetical protein Ssed_1746 2095609 - 2097327 + | Na+/solute symporter TERM 2077 2097378 - 2097393 + F 100 -10.4 -5.95166 | opp_overlap 2097378 AAGTTAGATTAAAAA GAGCGC TTCG GCGCTC TTTTTTTTGCTTCAA TERM 2078 2097393 - 2097378 - f 93 -10.4 -4.82154 | opp_overlap 2097378 AAGTTAGATTAAAAA GAGCGC TTCG GCGCTC TTTTTTTTGCTTCAA TERM 2079 2099665 - 2099684 + G 82 -5.6 -5.06414 | GTCATCGCAAACACG TCGGCTTC AGAT GGTGCCGA TTTTTATTCGAGCGA Ssed_1747 2097541 - 2100960 + | hypothetical protein Ssed_1748 2100963 - 2101790 + | hypothetical protein Ssed_1749 2101889 - 2102437 + | CDP-alcohol phosphatidyltransferase TERM 2080 2102440 - 2102426 - f 79 -5 -5.1675 | opp_overlap 2102426 GTATGGAGCAAAAAA GCATTA AAT TAACGC TTATCCACCAATTAA TERM 2081 2102759 - 2102741 - g 80 -4.5 -5.1101 | CTACTACGCAAAAAA GCCCCAA ACAAG CTGAGGC TGATTTCAATGAGAT Ssed_1750 2102482 - 2103012 + | hypothetical protein Ssed_1751 2103179 - 2105026 + | cyclic nucleotide-binding protein Ssed_1752 2105027 - 2105713 + | exonuclease, RNase T and DNA polymerase III Ssed_1753 2107456 - 2105705 - | sensor protein LuxQ Ssed_1754 2108057 - 2107524 - | hypothetical protein Ssed_1755 2108253 - 2108831 + | hypothetical protein TERM 2082 2109018 - 2108999 - f 77 -5.1 -4.97824 | overlap 2108990 AAAATCCAAATAAAA TTCATCT GCATGT AGATGAA TAAGATAACAATTGT Ssed_1756 2109325 - 2110869 + | NAD(P) transhydrogenase subunit alpha TERM 2083 2112037 - 2112057 + G 71 -8.3 -3.72324 | TAAACGATGATTTCG CCGATACCG ATG TGGTATTGG TTATTGGTGCGAATG Ssed_1757 2110884 - 2112284 + | NAD(P)(+) transhydrogenase (AB-specific) TERM 2084 2112338 - 2112299 - T 90 -10.8 -4.23999 | opp_overlap 2112309, overlap 2112296 2112309 GCATACTCAAAAGAA CCAACTCAAATGCCAGTC GATT GACTGGCATTTTTTTTGG GCTGAAATAAGTGAT TERM 2085 2112309 - 2112328 + T 100 -12.2 -5.78622 | opp_overlap 2112299 2112296 2112309 AAGAACCAACTCAAA TGCCAGTC GATT GACTGGCA TTTTTTTTGGGCTGA TERM 2086 2112328 - 2112309 - T 91 -12.2 -3.827 | opp_overlap 2112309, overlap 2112299 2112296 AAGAACCAACTCAAA TGCCAGTC GATT GACTGGCA TTTTTTTTGGGCTGA TERM 2087 2112846 - 2112815 - T 86 -10.3 -3.99592 | opp_overlap 2112821, overlap 2112821 ACCGATTAGCAGAAA CAAAAACACCAGC ACATAG GCTGGTGTTTTTT ATGCTTACGAGCTAC TERM 2088 2112840 - 2112821 - T 95 -9.3 -5.40464 | opp_overlap 2112821, overlap 2112815 TAGCAGAAACAAAAA CACCAGC ACATAG GCTGGTG TTTTTTATGCTTACG TERM 2089 2112821 - 2112840 + T 95 -9.3 -5.37345 | opp_overlap 2112815 2112821 TAGCAGAAACAAAAA CACCAGC ACATAG GCTGGTG TTTTTTATGCTTACG Ssed_1758 2113944 - 2112880 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 2090 2113986 - 2113967 - R 100 -10 -5.27335 | opp_overlap 2113967 TCTCTCAAATAAAAA GGCAGAAC CTTG GCTCTGCC TTATCTAACGTAATT Ssed_1759 2114711 - 2114040 - | GntR family transcriptional regulator TERM 2091 2114776 - 2114807 + r 78 -7.5 -4.37527 | opp_overlap 2114776 2114780 2114784, overlap 2114780 CCGTTAAAGCAAGTA TAAATAAAGGGAA ACAGTG TTCCCTTTATCTA TTTTGATACTTGTGA TERM 2092 2114807 - 2114776 - R 71 -9.7 -2.89569 | opp_overlap 2114776 2114780, overlap 2114780 2114784 CCGTTAAAGCAAGTA TAAATAAAGGGAA ACAGTG TTCCCTTTATCTA TTTTGATACTTGTGA TERM 2093 2114780 - 2114803 + r 72 -8.3 -3.46345 | opp_overlap 2114776 2114780 2114784, overlap 2114776 TAAAGCAAGTATAAA TAAAGGGAA ACAGTG TTCCCTTTA TCTATTTTGATACTT TERM 2094 2114803 - 2114780 - R 79 -8.3 -4.11938 | opp_overlap 2114780 2114776, overlap 2114776 2114784 TAAAGCAAGTATAAA TAAAGGGAA ACAGTG TTCCCTTTA TCTATTTTGATACTT Ssed_1760 2116405 - 2114840 - | aldehyde dehydrogenase Ssed_1761 2117463 - 2116462 - | proline racemase TERM 2095 2116497 - 2116516 + g 80 -5 -5.06451 | overlap 2116492 AGGCATAGGGGTCGC TGTCATCG ACTG TGATGGCA TTTTTTCCGGTGATC TERM 2096 2116553 - 2116563 + g 74 -6.8 -4.32177 | CATCCCTGAATGCTG GGCA TGA TGCC TTTGTTGTCACCTAC TERM 2097 2117295 - 2117273 - G 83 -4 -5.39721 | overlap 2117275 GGAGGATACAAAAAA GCCCCCGACA TCA TATCGTGGCC TCTGGGTTCAAACAT TERM 2098 2117317 - 2117347 + g 73 -9.8 -3.32984 | opp_overlap 2117315 2117314, overlap 2117315 TTCAAACATTAATGC CTTTCTGATCCAAT CAT AGTGGTTCAGAAAG TCTTGTCGCTTTTCA TERM 2099 2117522 - 2117532 + r 82 -4 -5.4505 | ACAGTGAAATTGGGT GATA GTT TATC TTTTTTATTCACCCA Ssed_1762 2118543 - 2117629 - | dihydrodipicolinate synthase Ssed_1763 2118735 - 2119775 + | proline racemase Ssed_1764 2119955 - 2121223 + | D-amino-acid dehydrogenase TERM 2100 2121198 - 2121214 + F 88 -10.9 -4.02021 | ATATCGACTTGAGTC CCTATCG GAT CGATAGG TTTAGTTAGTTGGTT TERM 2101 2121259 - 2121295 + F 70 -8.1 -3.73302 | opp_overlap 2121271 2121273, overlap 2121260 CAACCGCATCGGCAC CTGTTGATCGAAGAGAA GCC TCCTCTTCGATTGACAC TTGTTGAGTATCTTC TERM 2102 2121260 - 2121294 + F 80 -11.6 -2.83258 | opp_overlap 2121271 2121273, overlap 2121259 AACCGCATCGGCACC TGTTGATCGAAGAGAA GCC TCCTCTTCGATTGACA CTTGTTGAGTATCTT Ssed_1765 2121662 - 2122435 + | methyltransferase type 11 TERM 2103 2123012 - 2123002 - g 85 -5.4 -5.29385 | AAGTTAATGAAAAAA GCAA TAC TTGC CGGTGTTATCAGCTG Ssed_1766 2122993 - 2123328 + | hypothetical protein TERM 2104 2123467 - 2123486 + T 77 -10.8 -2.78596 | CTTATTTAACTGGGG TTGACCAC TATA GTGGTCAA TCTGATGAGCAAATG Ssed_1767 2124633 - 2123590 - | hypothetical protein Ssed_1768 2124946 - 2125896 + | meta-pathway phenol degradation-like protein TERM 2105 2125953 - 2125975 + F 89 -9.2 -4.70879 | opp_overlap 2125953 CTAAATATTAAAGAA GCCGGATATT CTT AATGTTCGGC TTTTTGCGCTTTGAG Ssed_1769 2126621 - 2126836 + | hypothetical protein TERM 2106 2126896 - 2126912 + T 74 -5.2 -4.75308 | overlap 2126909 AGATCTTTTCTTGTA TGACTT CCTTT AAGTCA TTTTTGACTGTTAGT Ssed_1770 2128337 - 2126997 - | guanosine polyphosphate pyrophosphohydrolase/synthetase Ssed_1771 2130188 - 2128641 - | phospholipase D/transphosphatidylase TERM 2107 2130539 - 2130523 - R 73 -9.4 -3.1364 | CAGTTAATCACTGAA GCGGGT GTATT ACCCGC TGCATAAGTAGATGG Ssed_1772 2131054 - 2130572 - | MarR family transcriptional regulator TERM 2108 2131125 - 2131151 + r 81 -6.7 -4.73448 | opp_overlap 2131126, overlap 2131126 2131148 GCAAAATTAAAAAAA ACAGAATAATG CCAGA CATTATTCTGA TTTTTCAGTCTATGT TERM 2109 2131150 - 2131126 - R 100 -10.9 -6.07969 | opp_overlap 2131126 2131125 2131148 CAAAATTAAAAAAAA CAGAATAATGC CAG ACATTATTCTG ATTTTTCAGTCTATG TERM 2110 2131126 - 2131150 + r 77 -10.2 -3.42985 | opp_overlap 2131126, overlap 2131125 2131148 CAAAATTAAAAAAAA CAGAATAATG CCAGA CATTATTCTG ATTTTTCAGTCTATG TERM 2111 2131232 - 2131263 + r 95 -13.1 -3.53012 | TACCTCTATCTTCAA CTGCCGGGTTAAA GTCTAA TTTATCCCGGCAG TTTAAAAAACAACAC Ssed_1773 2132516 - 2131299 - | putative transporter, BCCT family protein TERM 2112 2132852 - 2132881 + H 70 -9.5 -2.68282 | opp_overlap 2132861, overlap 2132851 TTTTATTCTTGAATG CGTGATTAATTGA ACGA TCAATTAATAACG ATTCTAATGATTAGT TERM 2113 2133097 - 2133050 - H 85 -8.8 -4.45544 | gap 1, opp_overlap 2133058 2133061, overlap 2133061 TTGTAGGAATGAAAA CAACTCAGTAATTACAGCTAAAA TTA TTTTAGCTGTAATTATTC-GTCG GGAGGTAGATAAACA TERM 2114 2133058 - 2133090 + H 100 -16.7 -3.14564 | opp_overlap 2133050 2133061, overlap 2133061 ATGAAAACAACTCAG TAATTACAGCTAAAA TTA TTTTAGCTGTAATTA TTCGTCGGGAGGTAG TERM 2115 2133061 - 2133087 + H 95 -14 -3.71848 | opp_overlap 2133050 2133061, overlap 2133058 AAAACAACTCAGTAA TTACAGCTAAAA TTA TTTTAGCTGTAA TTATTCGTCGGGAGG TERM 2116 2133087 - 2133061 - H 93 -14 -3.26842 | opp_overlap 2133061 2133058, overlap 2133050 AAAACAACTCAGTAA TTACAGCTAAAA TTA TTTTAGCTGTAA TTATTCGTCGGGAGG TERM 2117 2133945 - 2133920 - g 82 -10.6 -3.86897 | TTCATCGTCCAGAAA GCATATTGTG GTAATG CACAATATGC GGATGTACAAGCTAG Ssed_1774 2133324 - 2135177 + | carnitine O-acetyltransferase TERM 2118 2135280 - 2135300 + F 80 -11.2 -2.76242 | overlap 2135275 GTTGGCACTTGGATT GGAGTTCG AATAG CGAACTCC TCCTCTCTCTTAAGT Ssed_1775 2135442 - 2135801 + | hypothetical protein Ssed_1776 2136798 - 2135947 - | LysR family transcriptional regulator TERM 2119 2136116 - 2136131 + g 71 -4 -4.75472 | CTTCCCCAACCTAGC CCTTGA GTGA TTAAGG TTTTCTTGGTATGGA Ssed_1777 2136931 - 2137905 + | alpha/beta hydrolase fold Ssed_1778 2137935 - 2138543 + | short chain dehydrogenase Ssed_1779 2139853 - 2138615 - | hypothetical protein TERM 2120 2138707 - 2138725 + g 73 -7.4 -4.21275 | AGCCACCTTTCTTAT GAGCCTTA TCT TCAGGCTC TTTTCGCTGAATTCG TERM 2121 2138853 - 2138833 - G 78 -6.1 -4.70879 | opp_overlap 2138833 GCCAAAGGGCAAAAA TCAACACCA CAG CGGTGATGA TTATGGTGGCAATGA Ssed_1780 2140151 - 2141728 + | response regulator receiver modulated metal dependent phosphohydrolase Ssed_1781 2141738 - 2143102 + | signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein Ssed_1782 2144492 - 2143107 - | peptidase M24 TERM 2122 2145197 - 2145187 - g 71 -6.8 -4.14739 | GTACGCACTGGAAAA TCGG TAA CCGA TGACGCTATTGCAGC Ssed_1783 2144719 - 2145270 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 2123 2145893 - 2145876 - T 72 -8.5 -3.61178 | TTGAGTTATTCGAAA CTACTTC TCAC GAAGTAG TCAAAAATTTTACTC TERM 2124 2147969 - 2147987 + T 83 -7.4 -4.74706 | overlap 2147972 2147980 AGCCTTGTCTCACTC GAATTGGC TTC GCCAAATC TTTTTAAGTCTTGGC TERM 2125 2148246 - 2148214 - T 93 -13.7 -3.01912 | opp_overlap 2148215, overlap 2148221 GCACATGGATAGAGA TGCCAAAGATAAATT AAT AATTTATCTTTGGCT TTTTTAAGCCCGTTC TERM 2126 2148215 - 2148245 + T 100 -17.2 -5.01732 | opp_overlap 2148214 2148221 CACATGGATAGAGAT GCCAAAGATAAATT AAT AATTTATCTTTGGC TTTTTTAAGCCCGTT TERM 2127 2149132 - 2149120 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 2128 2149930 - 2149914 - T 75 -8 -4.08546 | overlap 2149927 ATGAGTAACGATAAA GGGAGT GAAAA ACTCCC TCGCCGAAAGACCAA TERM 2129 2150437 - 2150426 - T 72 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 2130 2151810 - 2151788 - T 95 -12 -4.20981 | opp_overlap 2151788 CTAATAAACGATAAA TCCCCAGCAC TTC GTGTTGGGGA TTTTTTCGTTTAACA TERM 2131 2151788 - 2151810 + T 100 -14.2 -5.37593 | opp_overlap 2151788 CTAATAAACGATAAA TCCCCAGCAC TTC GTGTTGGGGA TTTTTTCGTTTAACA TERM 2132 2151913 - 2151933 + T 83 -11.9 -3.21925 | GAGTAGGGTGGAACT GCTGCGCTT ATC AAGCGTAGC TTGATGCTGCGGTGT TERM 2133 2152003 - 2152037 + T 83 -12.3 -2.85366 | opp_overlap 2152011, overlap 2152011 ACTCCTGAATTTAAA GTGAAGAAGCCACCT GAATA AGGTGGCTTTTTTGC GTTTGGGCTTTTAAA TERM 2134 2152029 - 2152011 - T 80 -10.3 -3.78234 | opp_overlap 2152003 2152011 ATTTAAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 2135 2152011 - 2152029 + T 100 -10.3 -5.22039 | opp_overlap 2152011, overlap 2152003 ATTTAAAGTGAAGAA GCCACCT GAATA AGGTGGC TTTTTTGCGTTTGGG TERM 2136 2152568 - 2152578 + T 76 -6.8 -4.4296 | TTATTTTTAATGCGA GCCT TGA AGGC TTTTCGTGTCTCTTC Ssed_1784 2153244 - 2152549 - | hypothetical protein Ssed_1785 2153542 - 2153877 + | hypothetical protein Ssed_1786 2154002 - 2154949 + | magnesium and cobalt transport protein CorA Ssed_1787 2155258 - 2154944 - | hypothetical protein TERM 2137 2155385 - 2155409 + r 100 -14.4 -3.79519 | TAAATTTGCGATTGG CCGATTGGCT TATTT AGCCAATCGG TTTACTACTAGGCTT Ssed_1788 2156682 - 2155417 - | metal dependent phosphohydrolase TERM 2138 2156008 - 2156021 + g 85 -5.9 -5.12172 | AAAATTATTTTCAGG CGCCG TTAA CGGTG TTTTCTTTCTTAATA TERM 2139 2156629 - 2156619 - G 71 -8.2 -3.72893 | GATCTTTCCATGAAA CCGG CAG CCGG ACAAAATTGCCCACT Ssed_1789 2156838 - 2157545 + | hypothetical protein Ssed_1790 2158995 - 2157640 - | integral membrane sensor signal transduction histidine kinase Ssed_1791 2159730 - 2159056 - | two component transcriptional regulator TERM 2140 2159334 - 2159348 + g 91 -11.4 -3.98804 | opp_overlap 2159332 2159331 CGGCGAGATCAACTT CCAGCG CAC CGCTGG TTATTTGAGGTTTGA Ssed_1792 2160005 - 2160859 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 2141 2160933 - 2160917 - g 85 -7.9 -4.81163 | opp_overlap 2160917 CAAATATGAAGAAAA GCTGGCG ATT CGTCAGC TTTCTTTGTCAATTA TERM 2142 2160917 - 2160933 + G 100 -10.1 -4.59089 | opp_overlap 2160917 CAAATATGAAGAAAA GCTGGCG ATT CGTCAGC TTTCTTTGTCAATTA Ssed_1793 2160876 - 2161571 + | putative phosphonate ABC transporter, ATP-binding protein Ssed_1794 2161564 - 2163096 + | binding-protein-dependent transport systems inner membrane component Ssed_1795 2163644 - 2163300 - | hypothetical protein Ssed_1796 2164553 - 2163726 - | hypothetical protein TERM 2143 2164730 - 2164720 - H 71 -6.8 -4.09511 | opp_overlap 2164719 AATACTGTGCCAAAA GCAC TAA GTGC ATGTTAAACATTGGG Ssed_1797 2164932 - 2166524 + | integral membrane sensor signal transduction histidine kinase Ssed_1798 2166521 - 2167873 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 2144 2167933 - 2167889 - f 75 -10.2 -3.18239 | gap 1, opp_overlap 2167885 2167889 2167892, overlap 2167898 GATATATTGCAGCAA GAGGGGAAATTCGGTTATACC TGAT GATATAACCGCAT-TCCCGTC TATGCTCCTGTGATA TERM 2145 2167925 - 2167898 - f 70 -7.8 -3.67517 | opp_overlap 2167892 2167889 2167885, overlap 2167889 CAGCAAGAGGGGAAA TTCGGTTATACC TGAT GATATAACCGCA TTCCCGTCTATGCTC Ssed_1799 2168088 - 2169320 + | metal dependent phosphohydrolase domain-containing protein Ssed_1800 2170004 - 2169366 - | threonine efflux protein, putative Ssed_1801 2170947 - 2170111 - | AraC family transcriptional regulator TERM 2146 2170500 - 2170511 + g 72 -5.8 -4.32857 | opp_overlap 2170499 GCTCGGTGGTAAAGG CCAG CATG CTGG TTTCTATTTGCAAAC Ssed_1802 2171109 - 2171939 + | NAD synthetase TERM 2147 2171981 - 2171995 + T 95 -9.2 -5.35815 | opp_overlap 2171981 TTACCCATAGAGAAA GGCGCT ATC GGCGCC TTTTTATTTGCTCTC TERM 2148 2171995 - 2171981 - T 82 -8.5 -4.1399 | opp_overlap 2171981 TTACCCATAGAGAAA GGCGC TATCG GCGCC TTTTTATTTGCTCTC Ssed_1803 2172464 - 2171985 - | hypothetical protein TERM 2149 2172422 - 2172411 - G 74 -4.4 -4.86731 | overlap 2172412 GGTGGGCAAATAAAA GCAA AACT TTGC TCTGGGAGATCCTAA TERM 2150 2173369 - 2173343 - g 71 -3 -4.84359 | overlap 2173344 2173347 2173359 2173365 TTAGGGTTAGAAAAA CTCAGTTGGAAT AGT ATTCAAACGGAA TATGATCCGTTCAAA Ssed_1804 2172578 - 2174047 + | hypothetical protein Ssed_1805 2176230 - 2174053 - | diguanylate cyclase TERM 2151 2176467 - 2176449 - R 70 -8.8 -3.31726 | opp_overlap 2176461, overlap 2176447 TCTCTGGATAGAATA TGGCTGCT GTA AGCTGCCA ACTCGGAAGCAGGCA Ssed_1806 2177087 - 2176512 - | elongation factor P TERM 2152 2177189 - 2177200 + r 78 -7.2 -4.39002 | TTGTGCACCAAAGCC GGGC TATT GCCC TTTTATCCGCCGTTT Ssed_1807 2178809 - 2177214 - | putative ATP-binding component of ABC transporter TERM 2153 2178069 - 2178080 + g 71 -3 -4.90266 | TTGCTGCCTGATCTG CTTA TGCT TAAG TTTTTCGTTAGTAAG TERM 2154 2179290 - 2179267 - R 100 -11.8 -5.04601 | opp_overlap 2179267 GCCAGAAAGCAAAAA GGCAGAACTC TTTC GAATTCTGCC TTTTTAGAATGTGGT TERM 2155 2179267 - 2179290 + r 91 -9.6 -4.65168 | opp_overlap 2179267 GCCAGAAAGCAAAAA GGCAGAACTC TTTC GAATTCTGCC TTTTTAGAATGTGGT Ssed_1808 2181431 - 2179647 - | sulfatase TERM 2156 2180095 - 2180114 + g 72 -5.8 -4.33151 | gap 1 ACTAATGTATCGTCT GAAGTGGCT TCG AGC-ACTTC TTTTAGCTTCTGATC TERM 2157 2180744 - 2180757 + g 71 -4.5 -4.65838 | TTCTAAGATCTGAGC CGCGA CGAG TCGTG TTTTTACCCTCTATA TERM 2158 2180935 - 2180947 + g 76 -2 -5.1848 | opp_overlap 2180935, overlap 2180944 2180945 ACCTTATTACCACAA TTCA CCTTA TGAA TTTTTTCAATTCGTT Ssed_1809 2181733 - 2181518 - | hypothetical protein Ssed_1810 2182101 - 2183132 + | nucleoid-associated protein NdpA TERM 2159 2183208 - 2183191 - f 100 -12.7 -5.14965 | opp_overlap 2183191 ATTTTTATTAAAAAA GAGCGCC CTTT GGCGCTC TTTTCGATCTTGTAC TERM 2160 2183191 - 2183208 + F 100 -12.7 -4.30441 | opp_overlap 2183191 ATTTTTATTAAAAAA GAGCGCC CTTT GGCGCTC TTTTCGATCTTGTAC Ssed_1811 2183497 - 2184378 + | hypothetical protein Ssed_1812 2184417 - 2185265 + | peptidase M23B TERM 2161 2185330 - 2185305 - T 100 -9.7 -5.29846 | opp_overlap 2185305 2185307 AAGCTTAAAGAAAAA GCCGCCTCTAT GAAA ATCGAGGCGAC TTTTTTGTCTGCAGT TERM 2162 2185305 - 2185330 + T 93 -7.5 -5.37043 | opp_overlap 2185305, overlap 2185307 AAGCTTAAAGAAAAA GCCGCCTCTAT GAAA ATCGAGGCGAC TTTTTTGTCTGCAGT Ssed_1813 2186199 - 2185390 - | phytochelatin synthase-like protein Ssed_1814 2186356 - 2188437 + | putative putative ferrichrome-iron receptor TERM 2163 2188474 - 2188504 + F 80 -7.7 -4.4518 | gap 1, opp_overlap 2188474, overlap 2188478 GGCTAATACCACAAG TGTG-TCAGCCTTC GAAT GAAGGCTGGTTACA TTTTCGATTTTGCTT TERM 2164 2188478 - 2188499 + F 80 -10.9 -3.39955 | opp_overlap 2188474, overlap 2188474 AATACCACAAGTGTG TCAGCCTTC GAAT GAAGGCTGG TTACATTTTCGATTT TERM 2165 2188549 - 2188565 + F 73 -8.1 -3.88232 | ATTGGATAGTTTGTT TGAAGAT TAT ATCTTCA TTGTTATCTAACGCC TERM 2166 2189445 - 2189427 - f 76 -8.9 -3.6284 | AATTAGTATTGCAAA GGTAACC CCTGT GGTTACC GGGTAACATAGTACG TERM 2167 2189518 - 2189541 + F 100 -14.6 -3.32562 | opp_overlap 2189518, overlap 2189509 ACGGTTCTTAGGAGA GCGGCACCTG GCAA CAGGTGTCGC TTATCCGACCTTTAT TERM 2168 2189541 - 2189518 - f 83 -12.4 -2.78463 | opp_overlap 2189509 2189518 ACGGTTCTTAGGAGA GCGGCACCTG GCAA CAGGTGTCGC TTATCCGACCTTTAT Ssed_1815 2190542 - 2190952 + | hypothetical protein TERM 2169 2191334 - 2191380 + T 90 -9.5 -4.4767 | gap 1, opp_overlap 2191349, overlap 2191338 2191341 TCAGGCCAGAGGTTT GGGTA-GAGCCCACAAGGCC CGCTAATA GGCCTTGTGGGCTGGTTCTC TTTTCTACTCAGTAG TERM 2170 2191338 - 2191375 + T 90 -11.3 -4.04187 | opp_overlap 2191349, overlap 2191334 2191341 GCCAGAGGTTTGGGT AGAGCCCACAAGGCC CGCTAATA GGCCTTGTGGGCTGG TTCTCTTTTCTACTC TERM 2171 2191341 - 2191372 + T 100 -17.4 -3.0471 | opp_overlap 2191349, overlap 2191338 2191334 AGAGGTTTGGGTAGA GCCCACAAGGCC CGCTAATA GGCCTTGTGGGC TGGTTCTCTTTTCTA Ssed_1816 2192310 - 2191396 - | GCN5-related N-acetyltransferase Ssed_1817 2193751 - 2192297 - | SSS family solute/sodium (Na+) symporter Ssed_1818 2194947 - 2193754 - | lysine 2,3-aminomutase Ssed_1819 2196167 - 2195595 - | hypothetical protein Ssed_1820 2196759 - 2196220 - | ErfK/YbiS/YcfS/YnhG family protein Ssed_1821 2196931 - 2197770 + | ion transport protein TERM 2172 2198165 - 2198201 + G 73 -3.6 -4.91511 | gap 1 ATGCGTCACATATTG GTGATGAGCTCCACGGC CGCA GTCG-GGATCTCGGCGC TTTTTGTGGTCGACT Ssed_1822 2198117 - 2199634 + | MATE efflux family protein TERM 2173 2199700 - 2199642 - T 100 -19.5 -4.27316 | gap 1, opp_overlap 2199648 2199653 2199655 2199658 2199664, overlap 2199653 2199664 CCGGTTAACTGAAAA TGTTAATTTAAGACAATAAAAAGGGAGC CTAA GCTCCCTTTTTATTGTCTTAAATCAT-A TCAAGAAAGATATAG TERM 2174 2199648 - 2199695 + T 100 -27.6 -2.62184 | opp_overlap 2199642 2199653 2199664, overlap 2199653 2199655 2199658 2199664 AACTGAAAATGTTAA TTTAAGACAATAAAAAGGGAGC CTAA GCTCCCTTTTTATTGTCTTAAA TCATATCAAGAAAGA TERM 2175 2199690 - 2199653 - T 100 -23.1 -3.20361 | opp_overlap 2199648 2199653 2199655 2199658 2199664, overlap 2199642 2199664 AAAATGTTAATTTAA GACAATAAAAAGGGAGC CTAA GCTCCCTTTTTATTGTC TTAAATCATATCAAG TERM 2176 2199653 - 2199690 + T 100 -23.1 -3.11634 | opp_overlap 2199653 2199642 2199664, overlap 2199648 2199655 2199658 2199664 AAAATGTTAATTTAA GACAATAAAAAGGGAGC CTAA GCTCCCTTTTTATTGTC TTAAATCATATCAAG TERM 2177 2199655 - 2199688 + T 100 -19.9 -3.11768 | opp_overlap 2199653 2199642 2199664, overlap 2199653 2199648 2199658 2199664 AATGTTAATTTAAGA CAATAAAAAGGGAGC CTAA GCTCCCTTTTTATTG TCTTAAATCATATCA TERM 2178 2199658 - 2199685 + T 100 -15.8 -3.69702 | opp_overlap 2199653 2199642 2199664, overlap 2199655 2199653 2199648 2199664 GTTAATTTAAGACAA TAAAAAGGGAGC CTAA GCTCCCTTTTTA TTGTCTTAAATCATA TERM 2179 2199679 - 2199664 - T 100 -10.4 -5.29716 | opp_overlap 2199658 2199655 2199653 2199648 2199664, overlap 2199653 2199642 TTAAGACAATAAAAA GGGAGC CTAA GCTCCC TTTTTATTGTCTTAA TERM 2180 2199664 - 2199679 + T 100 -10.4 -5.29716 | opp_overlap 2199664 2199653 2199642, overlap 2199658 2199655 2199653 2199648 TTAAGACAATAAAAA GGGAGC CTAA GCTCCC TTTTTATTGTCTTAA Ssed_1823 2199953 - 2199717 - | hypothetical protein Ssed_1824 2200129 - 2200446 + | hypothetical protein Ssed_1825 2201244 - 2200789 - | putative lipoprotein TERM 2181 2202028 - 2202038 + G 71 -6.8 -4.2679 | CGTCGCCATATCGGT TGGC TTG GCCA TTTTACTCGGCGTTG Ssed_1826 2201603 - 2202337 + | hypothetical protein TERM 2182 2202801 - 2202823 + G 77 -10.6 -3.54902 | CGCGTTAGGTTGTTT TCGGATTGTC GTT GGCGATCCGA TTCATTATTACATCA Ssed_1827 2202343 - 2203128 + | hypothetical protein Ssed_1828 2203118 - 2203468 + | putative nitrogen regulatory protein P-II Ssed_1829 2203465 - 2203872 + | signal transduction protein TERM 2183 2203896 - 2203929 + T 73 -6.7 -4.27117 | opp_overlap 2203902, overlap 2203900 2203902 2203926 TATGGCAAAGTGTTG AAAAAATAGCGAGCC GGGA GGCTCGCTATGTTCG TTTATGTTATGCGAA TERM 2184 2203900 - 2203925 + T 89 -11.9 -3.70947 | opp_overlap 2203902, overlap 2203896 2203902 GCAAAGTGTTGAAAA AATAGCGAGCC GGGA GGCTCGCTATG TTCGTTTATGTTATG TERM 2185 2203923 - 2203902 - T 100 -14.5 -5.03747 | opp_overlap 2203900 2203896 2203902 AAAGTGTTGAAAAAA TAGCGAGCC GGGA GGCTCGCTA TGTTCGTTTATGTTA TERM 2186 2203902 - 2203923 + T 100 -14.5 -3.41709 | opp_overlap 2203902, overlap 2203900 2203896 AAAGTGTTGAAAAAA TAGCGAGCC GGGA GGCTCGCTA TGTTCGTTTATGTTA Ssed_1830 2204292 - 2203936 - | glutaredoxin Ssed_1831 2207399 - 2204358 - | hypothetical protein TERM 2187 2204526 - 2204547 + g 82 -11.6 -3.28924 | opp_overlap 2204513 CATATTGTCATCTAC CACCTGCC GGTTAA GGCAGGTG TTGTAGAGGGCGATA TERM 2188 2204754 - 2204771 + g 85 -11.3 -3.85698 | CTCCTCAATCTCAAG CTGGCTC AGCT GAGCCAG TTTGTGCCACAGAGC Ssed_1832 2207554 - 2208573 + | oxidoreductase FAD-binding subunit Ssed_1833 2208981 - 2208574 - | glyoxalase/bleomycin resistance protein/dioxygenase Ssed_1834 2209195 - 2209590 + | GCN5-related N-acetyltransferase Ssed_1835 2209616 - 2210356 + | hypothetical protein TERM 2189 2210374 - 2210389 + F 80 -4.6 -5.20333 | opp_overlap 2210374 TTCAGTTAAATATAA GGGAAC TTCG GCTCCC TTTTTGTTATCCGTA Ssed_1836 2210450 - 2210800 + | glyoxalase/bleomycin resistance protein/dioxygenase Ssed_1837 2210860 - 2211213 + | 5-carboxymethyl-2-hydroxymuconate isomerase TERM 2190 2211262 - 2211287 + T 75 -10.5 -3.06302 | opp_overlap 2211262 GTTACTAATAAAAAA GCGGTGATAAT TTTG ATTACCACCGC TTAACTAAACATGCT TERM 2191 2211287 - 2211262 - T 100 -12.7 -5.5112 | opp_overlap 2211262 GTTACTAATAAAAAA GCGGTGATAAT TTTG ATTACCACCGC TTAACTAAACATGCT Ssed_1838 2212970 - 2211309 - | asparagine synthetase B TERM 2192 2213134 - 2213122 - R 70 -3.3 -4.8743 | opp_overlap 2213122 2213125 GTGAAAATAAAGAAA CCGTA AAG TGCGG TGCATTTTGTTGTGT TERM 2193 2213442 - 2213412 - R 70 -8.2 -3.74928 | opp_overlap 2213415 2213417, overlap 2213414 2213417 AGAGCAACTTAAGAA GAGTAGGGCAGCTC AAT GAGCTGCCCTGTTT TACGACCAGACTGGC TERM 2194 2213440 - 2213414 - R 82 -10.8 -3.45087 | opp_overlap 2213415 2213417, overlap 2213412 2213417 AGCAACTTAAGAAGA GTAGGGCAGCTC AAT GAGCTGCCCTGT TTTACGACCAGACTG TERM 2195 2213415 - 2213439 + r 100 -16.5 -4.07687 | opp_overlap 2213414 2213412 2213417, overlap 2213417 GCAACTTAAGAAGAG TAGGGCAGCTC AAT GAGCTGCCCTG TTTTACGACCAGACT TERM 2196 2213437 - 2213417 - R 100 -16.9 -2.86661 | opp_overlap 2213415 2213417, overlap 2213414 2213412 AACTTAAGAAGAGTA GGGCAGCTC AAT GAGCTGCCC TGTTTTACGACCAGA TERM 2197 2213417 - 2213437 + r 100 -16.9 -3.63744 | opp_overlap 2213417 2213414 2213412, overlap 2213415 AACTTAAGAAGAGTA GGGCAGCTC AAT GAGCTGCCC TGTTTTACGACCAGA Ssed_1839 2215169 - 2213460 - | peptidase M28 TERM 2198 2213808 - 2213791 - G 74 -2.6 -5.0538 | overlap 2213792 2213794 TCTGAGCGGAAAAAA CCACCC GATTCA GGGCGA CTTTCTGATGTTGCC TERM 2199 2214531 - 2214545 + g 71 -7 -4.00756 | overlap 2214536 GTCATGAATGATGAT GGCACC CAG GGCGCC TTGTTTGCTGGCCTC TERM 2200 2215754 - 2215777 + r 100 -15.4 -3.01791 | opp_overlap 2215748 2215756, overlap 2215756 ATTTATAAATGGCAA TAGCCCGCTT ATTA AAGCGGGCTA TCTTAACGGGACGAT TERM 2201 2215756 - 2215775 + r 93 -13.6 -3.06696 | opp_overlap 2215756 2215748, overlap 2215754 TTATAAATGGCAATA GCCCGCTT ATTA AAGCGGGC TATCTTAACGGGACG TERM 2202 2215775 - 2215756 - R 93 -13.6 -3.14126 | opp_overlap 2215754 2215756, overlap 2215748 TTATAAATGGCAATA GCCCGCTT ATTA AAGCGGGC TATCTTAACGGGACG Ssed_1840 2216585 - 2215839 - | UMP phosphatase TERM 2203 2216201 - 2216175 - G 77 -8.6 -4.15044 | opp_overlap 2216175 2216195 GTTGGTTGCAATAAA GCGGGCTCCTTC GAC GACGAAGCGCGC CGCCTTATGGATCAT TERM 2204 2216846 - 2216826 - R 73 -8.3 -3.66999 | overlap 2216827 ATGCACTTAGGCAAA TTTGGCCAA CTT TTGGCCAAC TAAGGACAAATGGAA TERM 2205 2216845 - 2216827 - R 81 -11.8 -2.79878 | overlap 2216826 TGCACTTAGGCAAAT TTGGCCAA CTT TTGGCCAA CTAAGGACAAATGGA TERM 2206 2216886 - 2216866 - R 80 -4.6 -5.24449 | opp_overlap 2216866 2216875 GACAAATGGAAAAAA CCAGCGGC TGTCG GCTACTGG CTTTTTGATAAATCG Ssed_1841 2218267 - 2216927 - | hypothetical protein TERM 2207 2217164 - 2217192 + g 73 -7.6 -4.04579 | gap 1, opp_overlap 2217151 2217164 2217185 AACAAAGGCCAGGAA TTTGTGACCTTCG ATAT CGAAGGT-ACGAA TTTGATCTTTGTACC TERM 2208 2218513 - 2218535 + r 83 -12 -3.12847 | opp_overlap 2218513, overlap 2218501 2218500 TGATGGTAAAAGAAA GCCCAAACTC GGT GAGCTTGGGC TTAGGTGTACCGATT TERM 2209 2218535 - 2218513 - R 100 -14.2 -4.67048 | opp_overlap 2218501 2218500 2218513 TGATGGTAAAAGAAA GCCCAAACTC GGT GAGCTTGGGC TTAGGTGTACCGATT Ssed_1842 2219959 - 2218586 - | hypothetical protein TERM 2210 2219588 - 2219602 + g 82 -11.4 -3.31329 | overlap 2219586 2219589 GTTCCAGTAATCTTC GGCGAG GAT CTCGCC TCTCTTGTTCATTAC TERM 2211 2219980 - 2220016 + r 72 -9.6 -3.06796 | GTATTCCTGATTGAT GGTTATAAAGTTATGC TAATT GCGAAGCTTTATAACC TTCAATAGGCTGCGA Ssed_1843 2220621 - 2220217 - | hypothetical protein TERM 2212 2220771 - 2220795 + r 100 -11.5 -5.86976 | opp_overlap 2220771 TCTGAGATAAAAAAA GACCCGAGAAT TTA ATTCTCAGGTC TTTTTTATTTTATAG TERM 2213 2220795 - 2220771 - R 100 -13.7 -5.71712 | opp_overlap 2220771 TCTGAGATAAAAAAA GACCCGAGAAT TTA ATTCTCAGGTC TTTTTTATTTTATAG Ssed_1844 2221489 - 2220845 - | phosphoribosylglycinamide formyltransferase Ssed_1845 2222526 - 2221489 - | phosphoribosylaminoimidazole synthetase TERM 2214 2222645 - 2222658 + H 79 -6.7 -4.6526 | AGAACAGACATTGGT CACGA TTTA TCGTG TTTTTGAAACTTTAT Ssed_1846 2222749 - 2223375 + | Uracil phosphoribosyltransferase TERM 2215 2223474 - 2223447 - T 79 -11.4 -2.70932 | opp_overlap 2223453, overlap 2223453 TTGTTTCGTTAAGCA TAAAAAGGAGCC AATT GGCTCCTTTTTT ATTTTTCACTCTTGC TERM 2216 2223468 - 2223453 - T 93 -10.4 -4.98255 | opp_overlap 2223453, overlap 2223447 CGTTAAGCATAAAAA GGAGCC AATT GGCTCC TTTTTTATTTTTCAC TERM 2217 2223453 - 2223468 + T 100 -10.4 -5.93252 | opp_overlap 2223453 2223447 CGTTAAGCATAAAAA GGAGCC AATT GGCTCC TTTTTTATTTTTCAC Ssed_1847 2224821 - 2223502 - | Na+/H+ antiporter NhaC TERM 2218 2224058 - 2224044 - G 71 -4.2 -4.77157 | opp_overlap 2224044 TTAAGGCACCAAAAA TCATCG AGC CGGTGA TCAGTTGTACTGCGA TERM 2219 2224864 - 2224879 + H 77 -10.4 -3.34962 | TTGAGCGCCATTTTT GCCTGC CCGA GCAGGC TTGTCCAGTATAGAG Ssed_1848 2225132 - 2225737 + | alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen TERM 2220 2225825 - 2225803 - f 70 -9.2 -3.14344 | opp_overlap 2225803 GACCGTTTTTATTAA GCCAGTTG TATTTCG CAACTGGC TTTTTTTATCTGATT TERM 2221 2225803 - 2225825 + F 100 -9.9 -5.75478 | opp_overlap 2225803 GACCGTTTTTATTAA GCCAGTTGT ATTTC GCAACTGGC TTTTTTTATCTGATT Ssed_1849 2225953 - 2226474 + | YbaK/prolyl-tRNA synthetase associated region TERM 2222 2226521 - 2226504 - T 95 -11.3 -4.84527 | opp_overlap 2226504 GTTAGATAGTAAAAA GCCAGTG GATC CACTGGC TTTTTTTGCGTGCAT TERM 2223 2226504 - 2226521 + T 100 -11.3 -5.47821 | opp_overlap 2226504 GTTAGATAGTAAAAA GCCAGTG GATC CACTGGC TTTTTTTGCGTGCAT Ssed_1850 2227260 - 2226589 - | ribonuclease T Ssed_1851 2227378 - 2228271 + | OmpA/MotB domain-containing protein TERM 2224 2228329 - 2228348 + F 93 -9.3 -5.32882 | opp_overlap 2228322 TTTACAACTTGGAAT GCCCAAC CTTAGC GTTGGGC TTTTTTATGCTCGTA TERM 2225 2228438 - 2228415 - f 100 -10.4 -6.02914 | TTCAGACAAAAAAAA GCCCACTTAA TAAA TTAAATGGGC TGCAAAATATGTATT TERM 2226 2228524 - 2228505 - f 74 -6.4 -4.44915 | opp_overlap 2228519 2228522 GAACCAGGGATAAAA TTCACGTG TAAA CACGGGAA TTAAGAGTTCTTGTT TERM 2227 2228957 - 2228939 - g 77 -3.9 -5.1615 | gap 1 TCAATACTTAAAAAA CAGCACAT TTTA ATG-GCTG GAGTCGGCATCGCGT Ssed_1852 2228909 - 2231065 + | prolyl oligopeptidase TERM 2228 2231110 - 2231093 - f 95 -11.3 -4.72386 | opp_overlap 2231093 GAAATGAGTTAAAAA GAGGAGC AATG GCTCCTC TTTTTTATGAACAAA TERM 2229 2231093 - 2231110 + F 100 -11.3 -5.24129 | opp_overlap 2231093 GAAATGAGTTAAAAA GAGGAGC AATG GCTCCTC TTTTTTATGAACAAA Ssed_1853 2231231 - 2231629 + | 4-hydroxybenzoyl-CoA thioesterase Ssed_1854 2231619 - 2232308 + | MotA/TolQ/ExbB proton channel Ssed_1855 2232308 - 2232742 + | biopolymer transport protein ExbD/TolR TERM 2230 2233102 - 2233090 - g 80 -4.7 -5.07011 | opp_overlap 2233100, overlap 2233091 2233092 GATAGAAACGAAAAA TGCCG CAG CGGCT GCAAAGGCGGCTCAA TERM 2231 2233101 - 2233091 - g 71 -8.2 -3.6258 | opp_overlap 2233100, overlap 2233090 2233092 ATAGAAACGAAAAAT GCCG CAG CGGC TGCAAAGGCGGCTCA Ssed_1856 2232746 - 2233705 + | TolA family protein Ssed_1857 2233716 - 2235044 + | TolB domain-containing protein Ssed_1858 2235078 - 2235617 + | OmpA domain-containing protein TERM 2232 2235704 - 2235723 + G 84 -13.6 -2.71364 | ACTGCTGCACCCGCT CCGGTTGC TGAT GCAACCGG TGGTTCAAACGATGA Ssed_1859 2235638 - 2236366 + | TPR repeat-containing protein TERM 2233 2236436 - 2236424 - f 100 -6.3 -5.72254 | overlap 2236432 GCAAACAACAAAAAA TGCAA AAT TTGCA CTTGCAAGAGAAGAT TERM 2234 2236839 - 2236822 - f 74 -6.3 -4.37711 | TTATTAAATTCAAAA CCACTCT TCTG AAAGTGG ACTCATCATTAAGGT TERM 2235 2237171 - 2237154 - f 74 -6.3 -4.37711 | TTATTAAATTCAAAA CCACTCT TCCG AAAGTGG ACTCATCATTAAGGT Ssed_1860 2239082 - 2240224 + | porin TERM 2236 2240256 - 2240283 + T 90 -11.4 -3.83998 | opp_overlap 2240262, overlap 2240262 2240280 TAGATTTACACCATT AAAAAAGGAGGC TTAG GCCTCCTTTTTA TTTCATCTAAAATAA TERM 2237 2240277 - 2240262 - T 100 -10.4 -5.20216 | opp_overlap 2240256 2240262 TACACCATTAAAAAA GGAGGC TTAG GCCTCC TTTTTATTTCATCTA TERM 2238 2240262 - 2240277 + T 100 -10.4 -5.35815 | opp_overlap 2240262, overlap 2240256 TACACCATTAAAAAA GGAGGC TTAG GCCTCC TTTTTATTTCATCTA TERM 2239 2240348 - 2240358 + T 75 -5.4 -4.66938 | CTTATGCTGGCTGTG TCAG AAG CTGA TTTTCTCTTACAAAT Ssed_1861 2240603 - 2240334 - | glutaredoxin 1 Ssed_1862 2242408 - 2240666 - | type III restriction enzyme, res subunit TERM 2240 2241724 - 2241740 + g 71 -6.5 -4.14874 | opp_overlap 2241724 2241727, overlap 2241727 GTCCACAGTGACTAA GCAGGTC ATT GACCTCC TTTTCCCGGTATTCT TERM 2241 2242584 - 2242551 - R 100 -16.3 -5.83822 | GAGAGGTAAAAAAAA GCCCCTTATCTATTA CTGC TAATAAATAAGGGGC TAGCGGGAGTTATTT Ssed_1863 2244557 - 2242605 - | acetyl-CoA synthetase TERM 2242 2243992 - 2243976 - G 71 -10.1 -2.80612 | opp_overlap 2243975 2243976, overlap 2243975 CTTAAGCGGAATAAT GCGTCCG CCG CGAACGC CTTCGTCTGCAGTGA TERM 2243 2244879 - 2244890 + G 85 -5.8 -5.00884 | TCTGGCGGTTTATTG CTCC TCCT GGAG TTTTTTAGGAACCGT TERM 2244 2245226 - 2245240 + G 77 -6.4 -4.63218 | TCATTACCGCAGTAC TGGCGA TGT TTGCCA TTTTGTTCGGCACCC TERM 2245 2246342 - 2246373 + G 95 -12.4 -4.19276 | gap 1 TGATCCTTGCCAGTC GCTT-CGTGAGTCCG ACG CGGGCTTACGAAAGC TTTTCACGATTTTCA Ssed_1864 2244679 - 2248158 + | integral membrane sensor hybrid histidine kinase Ssed_1865 2248171 - 2248782 + | fumarylacetoacetate (FAA) hydrolase TERM 2246 2249453 - 2249430 - g 71 -6.8 -4.15788 | opp_overlap 2249430, overlap 2249432 AATCGTGTCAATAAA TATAAGATCG ATTG CGATCTTAAA TTTGGTCATCTGCAT TERM 2247 2249451 - 2249432 - g 74 -9.4 -3.6761 | opp_overlap 2249430, overlap 2249430 TCGTGTCAATAAATA TAAGATCG ATTG CGATCTTA AATTTGGTCATCTGC Ssed_1866 2249079 - 2250368 + | FAD dependent oxidoreductase TERM 2248 2250546 - 2250519 - T 93 -13.6 -2.92475 | opp_overlap 2250519 2250524, overlap 2250524 CCTAGGCTCATAAAT CAAAAGCCGAAC AGAT GTTCGGCTTTTA GTTATTTGACTCGTT TERM 2249 2250519 - 2250546 + T 81 -11.4 -2.98524 | opp_overlap 2250519 2250524, overlap 2250524 CCTAGGCTCATAAAT CAAAAGCCGAAC AGAT GTTCGGCTTTTA GTTATTTGACTCGTT TERM 2250 2250541 - 2250524 - T 93 -11.3 -4.61873 | opp_overlap 2250519 2250524, overlap 2250519 GCTCATAAATCAAAA GCCGAAC AGAT GTTCGGC TTTTAGTTATTTGAC TERM 2251 2250524 - 2250541 + T 93 -11.3 -4.62203 | opp_overlap 2250524 2250519, overlap 2250519 GCTCATAAATCAAAA GCCGAAC AGAT GTTCGGC TTTTAGTTATTTGAC Ssed_1867 2251235 - 2250576 - | two component LuxR family transcriptional regulator TERM 2252 2251387 - 2251403 + r 74 -5.2 -4.82901 | opp_overlap 2251387 CATTAAGGCTGAAAA TTGAGT AGGGA ACTCAA TTTTTATAGAGGCAA TERM 2253 2251448 - 2251414 - R 90 -13.1 -2.89742 | gap 1, opp_overlap 2251413 2251410 2251414, overlap 2251419 CTCAATTTTTATAGA GGCAATAGCAGCCGAT GACA ATCA-CTGCTATTGCC ATGTATTACTTACTC TERM 2254 2251414 - 2251448 + r 76 -10.9 -2.51413 | gap 1, opp_overlap 2251414 2251419, overlap 2251413 2251410 CTCAATTTTTATAGA GGCAATAGCAGCCGAT GACA ATCA-CTGCTATTGCC ATGTATTACTTACTC Ssed_1868 2251883 - 2251458 - | thioesterase superfamily protein TERM 2255 2252103 - 2252077 - R 93 -10.9 -5.04175 | TGAACCACACAAAAA GGCTTCACGGT ATAAA ACGGTGAAGCC TATGGCATAGGAGCT Ssed_1869 2253209 - 2252145 - | phospho-2-dehydro-3-deoxyheptonate aldolase Ssed_1870 2254187 - 2253375 - | hypothetical protein TERM 2256 2256523 - 2256498 - g 77 -10.5 -3.54919 | AATGATTCGGTTAAA GCGTTAATGGC AATG GCCATTAAAGC AGCCAAGGCTAAAGG Ssed_1871 2254314 - 2256686 + | phosphoenolpyruvate synthase TERM 2257 2256732 - 2256717 - f 90 -10.4 -4.47328 | opp_overlap 2256717 AAGTTCATCACAAAA GCCGCT ATTT AGCGGC TTTTTTTTGTTCATA TERM 2258 2256717 - 2256732 + F 100 -10.4 -6.13503 | opp_overlap 2256717 AAGTTCATCACAAAA GCCGCT ATTT AGCGGC TTTTTTTTGTTCATA Ssed_1872 2257426 - 2260485 + | D-lactate dehydrogenase (cytochrome) Ssed_1873 2260568 - 2261008 + | hypothetical protein Ssed_1874 2261121 - 2261540 + | MarR family transcriptional regulator TERM 2259 2261548 - 2261562 + F 83 -7.2 -4.77775 | CCGAATGATCGATTA GTGATT TTG AATCAC TTTCTTTTATGCCGT Ssed_1875 2261611 - 2262015 + | hypothetical protein Ssed_1876 2262380 - 2262036 - | hypothetical protein TERM 2260 2262539 - 2262516 - R 100 -14 -5.64006 | opp_overlap 2262520 ATTTAATTAAAAAAA GGGACGAAAT TAAT ATTTCGTCCC TTCAGAGAAGTTTAG Ssed_1877 2263618 - 2262584 - | Glu/Leu/Phe/Val dehydrogenase, dimerisation region Ssed_1878 2263878 - 2264321 + | hypothetical protein TERM 2261 2264391 - 2264360 - T 73 -10.3 -2.87344 | opp_overlap 2264360 2264366, overlap 2264366 TACTGTTTTGAGATA TGAAAATGGCACC TTTTAT GGTGCCATTTTTA TTGGCTGTTCATAAT TERM 2262 2264360 - 2264391 + T 85 -12.5 -3.20616 | opp_overlap 2264360 2264366, overlap 2264366 TACTGTTTTGAGATA TGAAAATGGCACC TTTTAT GGTGCCATTTTTA TTGGCTGTTCATAAT TERM 2263 2264366 - 2264385 + T 90 -9.3 -5.12971 | opp_overlap 2264366 2264360, overlap 2264360 TTTGAGATATGAAAA TGGCACC TTTTAT GGTGCCA TTTTTATTGGCTGTT TERM 2264 2264385 - 2264366 - T 86 -9.3 -4.39166 | opp_overlap 2264360 2264366, overlap 2264360 TTTGAGATATGAAAA TGGCACC TTTTAT GGTGCCA TTTTTATTGGCTGTT TERM 2265 2264508 - 2264469 - T 100 -16.8 -2.88999 | opp_overlap 2264478, overlap 2264471 2264478 CCGCTAGATATCAGA TATAAAAAAGCGGTAAGT ATCA ACTTACCGCTTTCTCATA GCTTAAAGATAGCTC TERM 2266 2264506 - 2264471 - T 100 -15 -2.99545 | opp_overlap 2264478, overlap 2264469 2264478 GCTAGATATCAGATA TAAAAAAGCGGTAAGT ATCA ACTTACCGCTTTCTCA TAGCTTAAAGATAGC TERM 2267 2264499 - 2264478 - T 100 -13.1 -5.43414 | opp_overlap 2264478, overlap 2264471 2264469 ATCAGATATAAAAAA GCGGTAAGT ATCA ACTTACCGC TTTCTCATAGCTTAA TERM 2268 2264478 - 2264499 + T 100 -13.1 -3.99405 | opp_overlap 2264478 2264471 2264469 ATCAGATATAAAAAA GCGGTAAGT ATCA ACTTACCGC TTTCTCATAGCTTAA Ssed_1879 2265907 - 2264540 - | adenylosuccinate lyase TERM 2269 2265225 - 2265213 - G 71 -4.8 -4.63486 | AGGCTGGTAACAAAA CGCT GTGAA AGCG TATGCCAATCAACTT Ssed_1880 2266550 - 2265936 - | hypothetical protein TERM 2270 2265982 - 2266002 + g 70 -9.7 -3.11687 | ACTATTGTTTTTCTG GCGAAGACA AGG TGTCTGCGC TTGCCTCCTAATTGG TERM 2271 2266263 - 2266241 - G 85 -9.8 -4.36914 | opp_overlap 2266240, overlap 2266242 TTCTTTCCGATAAAA TGCTCATGGC ATT GCCACGAGCC AACTTTCTCTCTAAG TERM 2272 2266262 - 2266242 - G 88 -13.3 -3.21934 | opp_overlap 2266240, overlap 2266241 TCTTTCCGATAAAAT GCTCATGGC ATT GCCACGAGC CAACTTTCTCTCTAA TERM 2273 2266355 - 2266377 + g 85 -12.1 -3.31144 | GATTGATGATGAGTT GGTAGCCTT TATTT AAGGCTACC TTGTCAGCATAAACA Ssed_1881 2267672 - 2266554 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2274 2267423 - 2267401 - G 73 -2 -5.0133 | overlap 2267411 TATTCGGCTAAAAAA TACTCGAACA CAT TGTCCCAATA TTCAGAGGCGAAGTT Ssed_1882 2268629 - 2267919 - | pseudouridine synthase, Rsu TERM 2275 2268484 - 2268496 + g 73 -3.3 -4.98672 | overlap 2268485 TTTGCTCTGGGCTTA ACCGT TTT ACGGG TTTTGTGTTTTTCAG TERM 2276 2268511 - 2268526 + g 78 -6 -4.8143 | GTTTTGTGTTTTTCA GCCCCC AGGT GTGGGC TTTTTGCCTTATTAA Ssed_1883 2269013 - 2271238 + | isocitrate dehydrogenase (NADP(+)) TERM 2277 2271331 - 2271307 - T 100 -15.1 -5.54907 | opp_overlap 2271307 TTGAGAAAATAAAAA GGCAGGGAATA TTA CATTCCCTGCC TTTTTTGTCTTACAT TERM 2278 2271307 - 2271331 + T 100 -14.4 -5.48063 | opp_overlap 2271307 TTGAGAAAATAAAAA GGCAGGGAAT ATTAC ATTCCCTGCC TTTTTTGTCTTACAT Ssed_1884 2271560 - 2271354 - | cold-shock DNA-binding domain-containing protein TERM 2279 2271639 - 2271606 - H 90 -9.7 -4.43815 | gap 1, opp_overlap 2271613, overlap 2271611 AGTAAGATAGTAAAA CTTAACAGGCGG-GAA AAA TTCACCGCCTGTTGAA CAGAATGAAAGCAGT TERM 2280 2271634 - 2271611 - H 86 -11.8 -3.40592 | gap 1, opp_overlap 2271613, overlap 2271606 GATAGTAAAACTTAA CAGGCGG-GAA AAA TTCACCGCCTG TTGAACAGAATGAAA Ssed_1885 2271808 - 2272116 + | ATP-dependent Clp protease adaptor protein ClpS Ssed_1886 2272153 - 2274411 + | ATP-dependent Clp protease, ATP-binding subunit ClpA TERM 2281 2274441 - 2274456 + T 93 -10.4 -5.16237 | opp_overlap 2274441 TTGGAATAAAAAAAA GGCTGC AACT GCAGCC TTTTTTAATACGATT TERM 2282 2274456 - 2274441 - T 100 -10.4 -6.09888 | opp_overlap 2274441 TTGGAATAAAAAAAA GGCTGC AACT GCAGCC TTTTTTAATACGATT TERM 2283 2274484 - 2274496 + T 91 -10.5 -4.61633 | opp_overlap 2274484 ATTGAAATAAAAAAA CCGGC TTT GCCGG TTTTTAAAAATCTGT TERM 2284 2274496 - 2274484 - T 100 -10.5 -5.96894 | opp_overlap 2274484 ATTGAAATAAAAAAA CCGGC TTT GCCGG TTTTTAAAAATCTGT Ssed_1887 2274740 - 2274522 - | translation initiation factor IF-1 Ssed_1888 2275590 - 2274880 - | arginyl-tRNA-protein transferase Ssed_1889 2276290 - 2275580 - | leucyl/phenylalanyl-tRNA--protein transferase Ssed_1890 2276346 - 2276822 + | 17 kDa surface antigen TERM 2285 2276905 - 2276858 - T 100 -17.4 -4.41548 | gap 1, opp_overlap 2276868 2276874, overlap 2276874 TGATATTGTACAAAA CCCG-AATAAATAAAAAGGAGCC ATT GGCTCCTTTTTATTTATAGCGAG TAGAATCGGGACTAG TERM 2286 2276868 - 2276894 + T 100 -16.8 -3.86897 | opp_overlap 2276858 2276874, overlap 2276874 CAAAACCCGAATAAA TAAAAAGGAGCC ATT GGCTCCTTTTTA TTTATAGCGAGTAGA TERM 2287 2276874 - 2276888 + T 100 -11.4 -5.38054 | opp_overlap 2276858 2276874, overlap 2276868 CCGAATAAATAAAAA GGAGCC ATT GGCTCC TTTTTATTTATAGCG TERM 2288 2276888 - 2276874 - T 100 -11.4 -5.47159 | opp_overlap 2276874 2276868, overlap 2276858 CCGAATAAATAAAAA GGAGCC ATT GGCTCC TTTTTATTTATAGCG Ssed_1891 2277276 - 2276917 - | hypothetical protein Ssed_1892 2277854 - 2278606 + | hypothetical protein TERM 2289 2278775 - 2278791 + T 95 -8.7 -5.45652 | TGATTCACATAACGT TTGGGTG ACT CGCCCAA TTTTTTCTTGAACAT Ssed_1893 2279526 - 2278750 - | putative transcriptional regulator Ssed_1894 2279633 - 2280844 + | permease Ssed_1895 2281126 - 2281893 + | hypothetical protein Ssed_1896 2282200 - 2281988 - | hypothetical protein TERM 2290 2282271 - 2282303 + r 100 -13 -4.56597 | gap 1, opp_overlap 2282266 2282279, overlap 2282279 ATGGGAGAAGTTATG TGATAAAAGAGGAGG GGCT CCTCCTCTTTT-TCA TTTTTGAACAAGGAC TERM 2291 2282279 - 2282296 + r 100 -11.3 -5.18355 | opp_overlap 2282279, overlap 2282271 AGTTATGTGATAAAA GAGGAGG GGCT CCTCCTC TTTTTCATTTTTGAA TERM 2292 2282296 - 2282279 - R 93 -11.3 -4.40358 | opp_overlap 2282279 2282271 AGTTATGTGATAAAA GAGGAGG GGCT CCTCCTC TTTTTCATTTTTGAA TERM 2293 2282384 - 2282394 + r 70 -8.2 -3.62857 | opp_overlap 2282380, overlap 2282380 2282377 TCACACACAAACTTT CGCC TGA GGCG TTAGTTGTTATTGAT Ssed_1897 2282569 - 2282402 - | hypothetical protein Ssed_1898 2283003 - 2282656 - | hydrogenase nickel insertion protein HypA Ssed_1899 2284022 - 2283006 - | hydrogenase expression/formation protein HypE Ssed_1900 2285140 - 2284025 - | hydrogenase expression/formation protein HypD TERM 2294 2284941 - 2284930 - G 71 -7.2 -4.0942 | overlap 2284931 TAGGCATGATACAAA CCGG GCAT CCGG GCCCATGGATGAACT Ssed_1901 2285384 - 2285145 - | hydrogenase assembly chaperone HypC/HupF TERM 2295 2285179 - 2285218 + g 71 -3.9 -4.71426 | gap 3, opp_overlap 2285186, overlap 2285182 2285186 2285188 TTTTCGACTATTTCG TT-ATAAAGCTCGATGCTCT CTA AG-GCATCG-GCTTTATCGA TTTTATTCATGACGA Ssed_1902 2286145 - 2285387 - | hydrogenase accessory protein HypB Ssed_1903 2288599 - 2286248 - | (NiFe) hydrogenase maturation protein HypF Ssed_1904 2290330 - 2288603 - | hypothetical protein Ssed_1905 2290874 - 2290317 - | hydrogenase expression/formation protein TERM 2296 2291024 - 2290999 - R 100 -14.1 -5.16681 | opp_overlap 2290997 2290994 2290992 CTAAAAATAATAAAA GTACGCCGATA AAAA CATCGGCGTAC CCTGATATTGCTTAA Ssed_1906 2291720 - 2291055 - | Ni/Fe-hydrogenase, b-type cytochrome subunit Ssed_1907 2293446 - 2291743 - | nickel-dependent hydrogenase, large subunit TERM 2297 2293285 - 2293317 + g 74 -11.3 -3.05384 | CTGTACGATCAGTCC GACATCCATAGGGGT ACG ACCCTTAAGGATGAC TTCGATGCCGCGCCA Ssed_1908 2294586 - 2293450 - | hydrogen:quinone oxidoreductase TERM 2298 2293544 - 2293527 - G 70 -7.7 -3.9461 | gap 1, opp_overlap 2293533, overlap 2293528 TTGCTCCAAGAATAA CGG-CACC TAC GGTGTCCG CAGTTGCATCAATTC Ssed_1909 2295037 - 2295453 + | signal transduction protein Ssed_1910 2295871 - 2296641 + | amino acid ABC transporter periplasmic protein TERM 2299 2299155 - 2299167 + G 77 -6.3 -4.55118 | GGCAGTGTTGTCGCC CTTGA AAA TCAAG TTTTGTATGGCCTTA Ssed_1911 2297022 - 2300897 + | ATP-dependent helicase HrpA TERM 2300 2300949 - 2300984 + F 79 -10 -3.53091 | gap 1, opp_overlap 2300952 2300957, overlap 2300957 AGCGGCTATCTTATT CAATAAAAGCGCAGA AAACCCC TCTGCGCTTTT-TTG TTTCCCCCAGGCGAT TERM 2301 2300982 - 2300952 - f 72 -9.8 -3.06796 | opp_overlap 2300949 2300957, overlap 2300957 GGCTATCTTATTCAA TAAAAGCGCAGAAA ACC CCTCTGCGCTTTTT TGTTTCCCCCAGGCG TERM 2302 2300957 - 2300977 + F 100 -8.3 -5.63517 | opp_overlap 2300952 2300957, overlap 2300949 TCTTATTCAATAAAA GCGCAGA AAACCCC TCTGCGC TTTTTTGTTTCCCCC TERM 2303 2300977 - 2300957 - f 93 -9.7 -4.67982 | opp_overlap 2300957 2300949, overlap 2300952 TCTTATTCAATAAAA GCGCAGAAA ACC CCTCTGCGC TTTTTTGTTTCCCCC TERM 2304 2301836 - 2301823 - g 78 -5.3 -4.84017 | AACCCCTGATAAAAA CGATA ATGT TATCG AGGAACAAGTATGAA Ssed_1912 2301545 - 2301850 + | NapD protein TERM 2305 2301877 - 2301908 + G 74 -10.8 -2.80779 | opp_overlap 2301877 2301882, overlap 2301873 CGTGAGTTTATCAAA GCAAATGCAGCAGC TTCA GCTGCAGCGCTTGC TGGTGTTACTCTTCC TERM 2306 2301908 - 2301877 - g 81 -10.8 -3.74693 | opp_overlap 2301877 2301873, overlap 2301882 CGTGAGTTTATCAAA GCAAATGCAGCAGC TTCA GCTGCAGCGCTTGC TGGTGTTACTCTTCC TERM 2307 2301900 - 2301882 - g 76 -8.8 -4.10552 | opp_overlap 2301877 2301873, overlap 2301877 GTTTATCAAAGCAAA TGCAGCAG CTT CAGCTGCA GCGCTTGCTGGTGTT Ssed_1913 2301847 - 2304336 + | nitrate reductase Ssed_1914 2304349 - 2304801 + | periplasmic nitrate reductase, cytochrome c-type protein TERM 2308 2305249 - 2305232 - g 73 -5.5 -4.57543 | AAGAATGAAAAAGAA CGACTCT TTAG AGTGTCG TAACTGTCATAACTT Ssed_1915 2304822 - 2305412 + | periplasmic nitrate reductase, cytochrome c-type protein Ssed_1916 2305422 - 2305550 + | hypothetical protein TERM 2309 2305638 - 2305584 - T 81 -6.7 -4.72545 | gap 1, opp_overlap 2305599, overlap 2305592 2305594 2305599 ATAAAAATAAAAGAA GCAATAAACCTAAAAGCCTGACTTTA ATAT TAAAGTCAGGCTTTTTA-TTCGTAGC GCTTCACTGAACTTA TERM 2310 2305631 - 2305592 - T 90 -10.2 -4.43642 | opp_overlap 2305599, overlap 2305584 2305594 2305599 AAAAGAAGCAATAAA CCTAAAAGCCTGACTTTA ATAT TAAAGTCAGGCTTTTTAT TCGTAGCGCTTCACT TERM 2311 2305629 - 2305594 - T 95 -15 -2.5262 | opp_overlap 2305599, overlap 2305592 2305584 2305599 AAGAAGCAATAAACC TAAAAGCCTGACTTTA ATAT TAAAGTCAGGCTTTTT ATTCGTAGCGCTTCA TERM 2312 2305599 - 2305624 + T 100 -14.9 -5.1356 | opp_overlap 2305594 2305592 2305584 2305599 GCAATAAACCTAAAA GCCTGACTTTA ATAT TAAAGTCAGGC TTTTTATTCGTAGCG TERM 2313 2305624 - 2305599 - T 100 -14.9 -4.42851 | opp_overlap 2305599, overlap 2305594 2305592 2305584 GCAATAAACCTAAAA GCCTGACTTTA ATAT TAAAGTCAGGC TTTTTATTCGTAGCG Ssed_1917 2306615 - 2305683 - | LysR family transcriptional regulator Ssed_1918 2306880 - 2308601 + | ABC-type sugar transport system, periplasmic component Ssed_1919 2308588 - 2309331 + | amino acid ABC transporter periplasmic protein TERM 2314 2309445 - 2309411 - T 91 -13 -3.06696 | opp_overlap 2309420, overlap 2309420 TTGGCTTCCAATAGA GCTAAAAAAGCCAGAC TCG GTCTGGCTTTTTTGTC TTAAAAATCGCTAGG TERM 2315 2309436 - 2309420 - T 100 -12.3 -5.15381 | opp_overlap 2309420, overlap 2309411 AATAGAGCTAAAAAA GCCAGAC TCG GTCTGGC TTTTTTGTCTTAAAA TERM 2316 2309420 - 2309436 + T 100 -12.3 -5.47159 | opp_overlap 2309411 2309420 AATAGAGCTAAAAAA GCCAGAC TCG GTCTGGC TTTTTTGTCTTAAAA Ssed_1920 2310462 - 2309461 - | D-alanyl-alanine synthetase A Ssed_1921 2310695 - 2311162 + | MarR family transcriptional regulator Ssed_1922 2311193 - 2312251 + | putative secretion protein TERM 2317 2312388 - 2312404 + F 70 -7.9 -3.64822 | overlap 2312390 GACTCGTACTCTGAT GCGCCTG GTT CAGGCTC TTTAGATAAAAAGGT TERM 2318 2312390 - 2312402 + F 72 -9.1 -3.40597 | overlap 2312388 CTCGTACTCTGATGC GCCTG GTT CAGGC TCTTTAGATAAAAAG TERM 2319 2313002 - 2312990 - g 75 -7.7 -4.28487 | GAGGATAAAACTAAA GCTCA ACC TGAGC CACAACCTCTGCCTC TERM 2320 2313207 - 2313193 - g 75 -3.4 -5.1287 | overlap 2313194 2313195 GGGATATGCAAAAAA GCGCGC CAT GGGCAC CATCTTAGGTGTGGT Ssed_1923 2312465 - 2313538 + | hypothetical protein Ssed_1924 2314289 - 2313621 - | cyclic nucleotide binding protein, putative TERM 2321 2314877 - 2314887 + G 71 -6.8 -4.1964 | GGTTATGATTACGCC TCGG TTC CCGA TTTTGAGATGTTAAA TERM 2322 2314946 - 2314969 + G 72 -6 -4.35644 | overlap 2314942 CAAACTAAAGTGAGA GTCGGTGGTA TTTT TACTAACGAC TTCTTTTATGGTGAT Ssed_1925 2314499 - 2315206 + | purine nucleoside phosphorylase TERM 2323 2315249 - 2315214 - T 100 -16.4 -3.73647 | opp_overlap 2315211 2315208 GGGATTGATTAACAA CCATTAGTGCGCTT TTGGTTTC AAGCGCACTAATGG CATCGGTATTGCTCT TERM 2324 2315303 - 2315284 - T 100 -9.3 -5.58454 | CCGATATTAAAAAAA TGCCACC GTTGAA GGTGGCA AAGGGGTGGGTAGGA TERM 2325 2315353 - 2315325 - T 84 -6.8 -4.91109 | overlap 2315327 TGGGTAGGACAAAAA TACCATTCAGAG ACATA CCCTAAATGGCA TAAGCACAGTTACTG TERM 2326 2315351 - 2315327 - T 73 -7.2 -4.08042 | overlap 2315325 GGTAGGACAAAAATA CCATTCAGAG ACATA CCCTAAATGG CATAAGCACAGTTAC Ssed_1926 2317069 - 2315363 - | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor Ssed_1927 2317502 - 2317921 + | hypothetical protein TERM 2327 2318185 - 2318234 + G 78 -5.7 -4.77438 | gap 1, overlap 2318186 TTATCTTAGGAGTAT TTGCTTCGTTTTCCCTGTCGGCCC ACG GGGTCGATGAGG-ATACCAAGCAG TTTTTAATCCTGAAT Ssed_1928 2318118 - 2318825 + | hypothetical protein TERM 2328 2318899 - 2318879 - f 79 -9.7 -3.6682 | overlap 2318864 GGCCACTCAGTCAAA CTGTTGGCC ATA GGCTAACAG AATTAGAATGGGCTC Ssed_1929 2318938 - 2319639 + | hypothetical protein TERM 2329 2319730 - 2319708 - f 72 -9 -3.28269 | opp_overlap 2319709 AATGCTCAAACGCAA TGCGCATCGG CAT CCGGTGCGCT TTTTTACGCTATGGG TERM 2330 2319709 - 2319729 + F 100 -14.7 -5.07567 | opp_overlap 2319708 ATGCTCAAACGCAAT GCGCATCGG CAT CCGGTGCGC TTTTTTACGCTATGG Ssed_1930 2319830 - 2320132 + | hypothetical protein Ssed_1931 2320578 - 2320237 - | hydrogenase nickel incorporation protein TERM 2331 2320646 - 2320617 - R 86 -12.1 -3.28684 | opp_overlap 2320610 2320609 AACGATCGACAGTAA CGGCCGGGACATA GTTT CATGACCCGACCG TTCCAGATCTCTAGT Ssed_1932 2323344 - 2320657 - | pyridine nucleotide-disulphide oxidoreductase TERM 2332 2321313 - 2321327 + g 70 -10 -3.12895 | opp_overlap 2321303, overlap 2321308 2321307 ACACATGATCGGCCT CCACCA GTG TGGTGG TCTGTTCATCGAAGC Ssed_1933 2324128 - 2323457 - | hydrogenase nickel incorporation protein TERM 2333 2323874 - 2323884 + g 71 -8.2 -3.64866 | overlap 2323865 GTGTAGCTGGATCAC CCGG GTC CCGG TTTGGGCTATGGTGT TERM 2334 2324249 - 2324264 + H 74 -6.2 -4.36774 | CTAGTTTTAGCTGGT TAGAGT ATTT ACTCTA TTTATGTTGTTAATT Ssed_1934 2324596 - 2326500 + | hypothetical protein TERM 2335 2326588 - 2326562 - T 80 -10.1 -3.78775 | opp_overlap 2326569, overlap 2326566 TGCCGGATCATCAAA GATAGGTGCCG TGAGT CGGCACCTGCC ACACAAGGCTATCTG TERM 2336 2326584 - 2326566 - T 86 -11.7 -3.31162 | opp_overlap 2326569, overlap 2326562 GGATCATCAAAGATA GGTGCCG TGAGT CGGCACC TGCCACACAAGGCTA Ssed_1935 2328707 - 2326656 - | exodeoxyribonuclease V TERM 2337 2328131 - 2328142 + g 77 -4.4 -5.03314 | opp_overlap 2328127, overlap 2328121 GTTTGGTAAAGGCGG TAGC CGTT GCTA TTTTTTGCCAGTCAA Ssed_1936 2332459 - 2328704 - | exodeoxyribonuclease V, beta subunit TERM 2338 2329099 - 2329076 - G 73 -5.4 -4.52857 | gap 1, opp_overlap 2329086 ATCGGCGATATAAAA TTGACCCT-GA TGC TCGAAGGTCAA ATCGATAAAGCCTTT TERM 2339 2330814 - 2330839 + g 71 -6.9 -4.30719 | ATTTTCAGGGCCGAT GTAGTGGTCGA TTTC TCGACTAATAC TTTGTTGTCGGCAAA TERM 2340 2331600 - 2331622 + g 79 -2.1 -5.42862 | gap 2, opp_overlap 2331600 GCATCGAGCATGATA GC-GA-GCTTA GGG TAAGCGTCAGC TTTTTTTCCGAATCT TERM 2341 2331759 - 2331801 + g 76 -11 -3.1364 | overlap 2331796 TTTGTAAACTCTTGC GGCACCGGCTGAGCGCTGGC CTG GCTTGCGCCCAGCAGCGGCC TTAGCTGCTTGGATA Ssed_1937 2336024 - 2332461 - | exodeoxyribonuclease V, gamma subunit TERM 2342 2336685 - 2336695 + G 74 -6.8 -4.31412 | CAGGCTTTAACACTT GCCA CCT TGGC TTTTGCTGCATGTTT TERM 2343 2337072 - 2337100 + G 85 -8.1 -4.79955 | overlap 2337062 2337061 GGTGCGGGTAATGCG GGCGCCGCAATCA CCC TGGTTTTGGTGCC TTTTATTGTCGATAT Ssed_1938 2336643 - 2337917 + | nitrate/nitrite transporter TERM 2344 2337975 - 2337995 + T 87 -3.3 -5.74086 | overlap 2337976 TTTAAACGGTTAAAG TCAGTTAAT TGA ATTTACTGG TTTTTTGTTTGCTTT TERM 2345 2338060 - 2338040 - T 88 -11.3 -3.77087 | GATTGAATATTGAAA GTATCTATC TCT GATAGATAC AAAAGATATTACAGC Ssed_1939 2338389 - 2338069 - | hypothetical protein Ssed_1940 2339033 - 2340037 + | sugar-binding protein, putative Ssed_1941 2341000 - 2342286 + | hypothetical protein Ssed_1942 2342318 - 2344330 + | peptidase S15 TERM 2346 2344352 - 2344382 + F 73 -8.2 -3.80862 | overlap 2344354 2344356 GGCCTGTTTATCTTT TACAGCCTCTACCC AAA GGGCAGGGGCTATG TTTCCTACTAACTTT TERM 2347 2344354 - 2344380 + F 72 -8.6 -3.48292 | overlap 2344352 2344356 CCTGTTTATCTTTTA CAGCCTCTACCC AAA GGGCAGGGGCTA TGTTTCCTACTAACT TERM 2348 2344356 - 2344378 + F 85 -11.2 -3.31162 | overlap 2344354 2344352 TGTTTATCTTTTACA GCCTCTACCC AAA GGGCAGGGGC TATGTTTCCTACTAA Ssed_1943 2345093 - 2345488 + | transposase Ssed_1946 2347133 - 2347708 + | cytochrome c553 TERM 2349 2347943 - 2347923 - g 70 -7.7 -3.85878 | opp_overlap 2347900, overlap 2347900 GAAGAATATCAACAA TCAATTCAT TTT ATGAATCGA ACAGGCATTAGAGCT Ssed_1947 2347716 - 2348294 + | nitrate/TMAO reductase TERM 2350 2348375 - 2348351 - f 91 -13 -3.16683 | overlap 2348338 ATCCTATGCCATTAA TGCTGTTCAG GCTTA CTGAACAGCA TTACAGCTAAACCTC Ssed_1948 2349116 - 2350096 + | hypothetical protein Ssed_1949 2352920 - 2351145 - | hypothetical protein Ssed_1950 2353855 - 2352917 - | hypothetical protein TERM 2351 2354100 - 2354110 + r 73 -8.2 -3.90744 | GAGCCTATATTCCAT GCCC TTG GGGC TTATTTGAAGCGCCC TERM 2352 2354889 - 2354873 - R 83 -9.5 -3.92996 | GGCGATAGATAACAA TGAAGGT AAG ACCTTCA AACACACTAACCAAT Ssed_1951 2355607 - 2354966 - | putative nitrate/nitrite response regulator; NarL TERM 2353 2355068 - 2355082 + g 76 -11.4 -2.78371 | overlap 2355067 2355076 AACCTTGACCGTCGT CTCGGC GAT GCCGAG CTTGTTGGCGATATC TERM 2354 2355742 - 2355714 - R 73 -7.4 -4.005 | gap 1, opp_overlap 2355716, overlap 2355715 AAACTAATGTATAAA CTCC-AGCAGCAC CTTA GTGCCGCTAGGTG AGTTGGGTTCAAAGG Ssed_1952 2357477 - 2355702 - | two-component sensor NarX TERM 2355 2357070 - 2357092 + g 76 -2.1 -5.1861 | gap 1 TTGGGGAGATTGCTT TATTG-CGTC CCAC GATGACAATA TTTTTTGATGCTGAG TERM 2356 2357471 - 2357495 + g 88 -8.7 -4.91046 | CGCCAACTTCATTGT TAACCATTGGT TGC GTCAATGGTTA TTTGTTTGTTTTATG TERM 2357 2357883 - 2357865 - g 80 -3.8 -5.21709 | overlap 2357877 2357879 TCTGATATCAAAAAA TGGGACGT AGA AGATCCCA AGTTTTGGGACAGTG Ssed_1953 2357847 - 2359451 + | nitrate/nitrite transporter Ssed_1954 2359595 - 2363359 + | respiratory nitrate reductase alpha chain Ssed_1955 2363372 - 2364910 + | respiratory nitrate reductase beta subuni TERM 2358 2365072 - 2365030 - g 100 -10.7 -4.60041 | gap 2, opp_overlap 2365029 2365028 ACTCAGTCTTAAAAA CCGTGCCG-A-GTTGGTGGAT TTT ATCCGCCAACTTACGGCAAGG GATTTATATGACGCT TERM 2359 2365139 - 2365184 + G 72 -11.3 -2.74012 | gap 1, opp_overlap 2365150 GCGCTATCCCTACTC TTGTTTGAACACGTTCACGGTG AGT CAC-GTGATCGTGGTCAAGCGA TGGTTGACCTGATGA Ssed_1956 2364914 - 2365648 + | nitrate reductase molybdenum cofactor assembly chaperone Ssed_1957 2365659 - 2366336 + | nitrate reductase TERM 2360 2366360 - 2366381 + F 90 -11.6 -3.99779 | opp_overlap 2366360 GCTTAAGTTAAATAA GCGGACAG CATTGT CTGTCCGC TTTCATTAAGTTTTA TERM 2361 2366381 - 2366360 - f 90 -11.6 -4.0098 | opp_overlap 2366360 GCTTAAGTTAAATAA GCGGACAG CATTGT CTGTCCGC TTTCATTAAGTTTTA TERM 2362 2366415 - 2366443 + F 72 -10.5 -2.64199 | opp_overlap 2366415 2366414 2366411, overlap 2366414 2366410 2366423 AGCGTAAAAATTAAC GATTGAGATTAAG GAG CTTGATTTCAATC CTTAGTTAATAACTG Ssed_1958 2366676 - 2367488 + | putative peptidyl-prolyl cis-trans isomerase, PpiC-type TERM 2363 2367547 - 2367534 - f 100 -8.1 -5.75478 | opp_overlap 2367534, overlap 2367526 AACTATATAAAAAAA CGGCA TTTA TGCCG TTTTTTATTGCGATT TERM 2364 2367534 - 2367547 + F 93 -8.1 -5.4756 | opp_overlap 2367534 2367526 AACTATATAAAAAAA CGGCA TTTA TGCCG TTTTTTATTGCGATT TERM 2365 2367603 - 2367621 + F 73 -10.4 -2.82681 | opp_overlap 2367609, overlap 2367594 2367605 2367607 CTCTTTTATATTGTC GATACACT AAA AGTGTATC TGTAATAAACTTTTA Ssed_1959 2367649 - 2367978 + | hypothetical protein Ssed_1960 2368671 - 2368129 - | CBS domain-containing protein TERM 2366 2368177 - 2368195 + g 77 -4.4 -5.03994 | AGCTTCCTGTTCCGT CCCCTCGG TGA CAAAGGGG TTTTTCTCTCTGAAA Ssed_1961 2369061 - 2368798 - | hypothetical protein TERM 2367 2368865 - 2368878 + g 77 -4.5 -4.86773 | overlap 2368866 GCCAGATCTGAGAGG TCCAG TAAA CTGGG TTTTTCATCATTTTC TERM 2368 2368924 - 2368942 + g 71 -3.1 -5.00616 | overlap 2368926 GTACTCAACCTCTGA GCTGATG TATTC CATCAAC TTTTTTGGGCAACCG TERM 2369 2369189 - 2369136 - R 74 -4.8 -4.73108 | gap 3, opp_overlap 2369154 TGCATAAAAGCAAAA GGCTGG-CACCTACTGATCTGATTCAA TCA TTATATCAGAA-AGC-GGTGGCCAGCC ATATTAACCCCATAA Ssed_1962 2369617 - 2369222 - | hypothetical protein TERM 2370 2369477 - 2369503 + g 76 -2.2 -5.31545 | TTTGTCTACGCACAT CACTGGAGAG ATGGTCC CTCGCTGGTG TTTTTTGCTCTTCTT Ssed_1963 2371508 - 2369778 - | serine/threonine protein kinase Ssed_1964 2373064 - 2371589 - | nitrate/nitrite transporter TERM 2371 2373117 - 2373127 + r 88 -2.6 -5.96219 | ATTTTAGTGCAAATG TTAA TTT TTAA TTTTTTTTGTAACTG Ssed_1965 2375639 - 2373615 - | transglutaminase domain-containing protein TERM 2372 2373670 - 2373684 + g 85 -2.8 -5.62045 | opp_overlap 2373672, overlap 2373672 CTGAATTGATTTGAA AACAGT TTG ACTGTC TTTTTTCTTCTGTGT TERM 2373 2373954 - 2373942 - G 70 -7.7 -3.90729 | AACAAGGCCGATAAA GGTGA TAC TCACC AGCATGAAAATGGCT Ssed_1966 2376625 - 2375636 - | hypothetical protein Ssed_1967 2377552 - 2376641 - | ATPase TERM 2374 2376833 - 2376851 + g 71 -4.5 -4.52589 | overlap 2376829 TTTACTGGCTCGGGG TGAGAGG CCATA CCCCTCA TTTTGTGTACGGGAC Ssed_1968 2378394 - 2377699 - | diguanylate phosphodiesterase TERM 2375 2378686 - 2378696 + H 79 -6.8 -4.56436 | overlap 2378672 GCCGAGAACAGTTCC GGTG ATT CACC TTGTTTTATTTGATA TERM 2376 2379393 - 2379407 + G 71 -7.2 -3.96624 | opp_overlap 2379389, overlap 2379389 CAATGAAGATAGTCG TACAGT ACT ACTGTA TTTCTCCTGACGATA Ssed_1969 2379071 - 2379772 + | hypothetical protein TERM 2377 2379910 - 2379896 - f 75 -10 -3.03203 | CTATTAATAACGATA TGCCAG ACA CTGGCA AGGATATGTGATGAG TERM 2378 2380774 - 2380762 - g 70 -7.7 -3.90318 | TTATCATTCCACAAA TCCAG TAT CTGGA TGTCAGTCAACGCCC Ssed_1970 2379921 - 2381882 + | hypothetical protein TERM 2379 2381917 - 2381936 + T 100 -5 -5.81622 | opp_overlap 2381917 CTGAATACGGGAAAA GGTCTTAG TTTA TTAAGGCC TTTTTTTAGTTTTAT Ssed_1971 2382952 - 2382140 - | hypothetical protein Ssed_1972 2383251 - 2382985 - | hypothetical protein Ssed_1973 2384891 - 2383623 - | histidine kinase Ssed_1974 2385559 - 2384888 - | two component transcriptional regulator, winged helix family protein Ssed_1975 2388741 - 2385553 - | acriflavin resistance protein Ssed_1976 2389979 - 2388741 - | RND family efflux transporter MFP subunit Ssed_1977 2391373 - 2389976 - | RND efflux system, outer membrane lipoprotein, NodT family protein Ssed_1978 2391958 - 2391644 - | hypothetical protein Ssed_1979 2394257 - 2392308 - | lytic transglycosylase, catalytic TERM 2380 2392684 - 2392705 + g 86 -13.7 -3.06183 | opp_overlap 2392684 ATCAATTGCATCAGA CCTCGGGCG CCGA CGCCTGAGG TTGCATAGGGATAAA TERM 2381 2392705 - 2392684 - G 76 -11.5 -2.81173 | opp_overlap 2392684 ATCAATTGCATCAGA CCTCGGGCG CCGA CGCCTGAGG TTGCATAGGGATAAA Ssed_1980 2395891 - 2394344 - | hypothetical protein TERM 2382 2394863 - 2394843 - G 72 -10.5 -3.05343 | opp_overlap 2394840 2394843 CTCAGACCTTTAATA TGTCCTCTC AAC GAAAGGACA TGATCTTTCAGGGCT Ssed_1981 2396144 - 2397166 + | putative sulfite oxidase subunit YedY Ssed_1982 2397180 - 2397809 + | putative sulfite oxidase subunit YedZ TERM 2383 2398386 - 2398372 - g 76 -7.1 -4.37886 | opp_overlap 2398385, overlap 2398375 GTATTGGGGATAAAA GACCC TAACG GGGTC AAGTTATTTGAATTG TERM 2384 2399229 - 2399203 - g 78 -11.4 -3.05715 | opp_overlap 2399201 2399204, overlap 2399190 AATGCCGCCATTGAA GCGGCCCGCGCC GGT GAAGCGGGCCGT GGTTTTGCCGTGGTT TERM 2385 2399204 - 2399228 + G 84 -12.7 -3.10098 | opp_overlap 2399190 2399203, overlap 2399201 ATGCCGCCATTGAAG CGGCCCGCGCC GGT GAAGCGGGCCG TGGTTTTGCCGTGGT Ssed_1983 2397997 - 2399643 + | methyl-accepting chemotaxis sensory transducer TERM 2386 2399681 - 2399697 + F 100 -12.3 -5.71712 | opp_overlap 2399680 CGTGAGTGATGAGAG CCAGGCT TAT AGCCTGG TTTTTTTGTATCAGG Ssed_1984 2399804 - 2400298 + | ribonuclease activity regulator protein RraA TERM 2387 2401675 - 2401663 - g 93 -2.7 -5.94597 | TAATATGAAAAAAAA TCTTG CCG CAAAA GGTCAGTTTGAAGTT Ssed_1985 2400317 - 2402152 + | AsmA family protein Ssed_1986 2402152 - 2402739 + | intracellular proteinase inhibitor domain-containing protein TERM 2388 2402821 - 2402784 - T 93 -14.4 -2.81627 | opp_overlap 2402789, overlap 2402789 AAGAGAATCTAAGTA CAAAATAGCCAGTGTC TTTGTG GACACTGGCTATTTTT TTTCCTATCTTGTCC TERM 2389 2402816 - 2402789 - T 100 -14.3 -4.56093 | opp_overlap 2402789, overlap 2402784 AATCTAAGTACAAAA TAGCCAGTGTC TTTGTG GACACTGGCTA TTTTTTTTCCTATCT TERM 2390 2402789 - 2402816 + T 100 -15 -5.92337 | opp_overlap 2402789 2402784 AATCTAAGTACAAAA TAGCCAGTGTCT TTGT GGACACTGGCTA TTTTTTTTCCTATCT Ssed_1987 2404462 - 2402906 - | methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor TERM 2391 2404645 - 2404615 - R 95 -14.9 -2.73067 | overlap 2404605 2404612 2404617 TTGAATCATATATGA TATGACTGCAACG GCTTG CGCTGCAGTCATA GAGGTGCAGATACCC TERM 2392 2404643 - 2404617 - R 90 -13.1 -2.90685 | overlap 2404605 2404615 2404612 GAATCATATATGATA TGACTGCAACG GCTTG CGCTGCAGTCA TAGAGGTGCAGATAC Ssed_1988 2406254 - 2404695 - | lytic transglycosylase, catalytic TERM 2393 2406230 - 2406212 - G 93 -14.6 -3.5944 | ACTGACAGGCCGAAA GCAGGGAG AGA CTCCCTGC AATTACAATAGTTTG Ssed_1989 2407161 - 2406343 - | hydroxyacylglutathione hydrolase TERM 2394 2407508 - 2407528 + G 71 -3.1 -5.00027 | overlap 2407510 GAGCTTGATATGCCG GGGCTTCCC ATT GGCAGGCGC TTTTCTCTTTTTGAT Ssed_1990 2407343 - 2408077 + | hypothetical protein Ssed_1991 2408187 - 2409083 + | LysR family transcriptional regulator Ssed_1992 2409659 - 2409189 - | ribonuclease H Ssed_1993 2409727 - 2410455 + | DNA-directed DNA polymerase Ssed_1994 2410466 - 2411782 + | hypothetical protein TERM 2395 2411806 - 2411830 + T 81 -5.7 -5.08824 | opp_overlap 2411806 ATTTCGTTTGATAAA GCAGCGAAT ACCGTTG AATCGCTGC TTTTTTAACTAAACA TERM 2396 2412139 - 2412174 + T 100 -15.6 -2.93747 | opp_overlap 2412142 2412146, overlap 2412146 GTCCGCTCCGCCAAA CAACGAAGCCCTTGTC GAAA GACAAGGGCTTTTTTG TATCTGAAATTTAGT TERM 2397 2412171 - 2412142 - T 79 -9.3 -3.90744 | opp_overlap 2412139 2412146, overlap 2412146 CGCTCCGCCAAACAA CGAAGCCCTTGTC GAAA GACAAGGGCTTTT TTGTATCTGAAATTT TERM 2398 2412146 - 2412167 + T 100 -14.5 -5.4251 | opp_overlap 2412142 2412146, overlap 2412139 CCGCCAAACAACGAA GCCCTTGTC GAAA GACAAGGGC TTTTTTGTATCTGAA TERM 2399 2412167 - 2412146 - T 100 -14.5 -3.61652 | opp_overlap 2412146 2412139, overlap 2412142 CCGCCAAACAACGAA GCCCTTGTC GAAA GACAAGGGC TTTTTTGTATCTGAA TERM 2400 2412744 - 2412705 - T 79 -10 -3.57971 | gap 1, overlap 2412706 ACACTCAGGTGCAAA CGCGGCTGTGACCGTCCGT GAC ACGGA-AGTCACGGCCGAA GCTATAGGGACCCTT TERM 2401 2412743 - 2412706 - T 79 -11.3 -2.74461 | gap 1, overlap 2412705 CACTCAGGTGCAAAC GCGGCTGTGACCGTCCGT GAC ACGGA-AGTCACGGCCGA AGCTATAGGGACCCT Ssed_1995 2413830 - 2413006 - | purine nucleoside phosphorylase Ssed_1996 2413963 - 2414892 + | HTH-type transcriptional regulator XapR Ssed_1997 2416587 - 2414974 - | peptidase M28 TERM 2402 2415729 - 2415749 + g 73 -8.3 -3.90112 | overlap 2415730 CATGTTCAATGGCCG TTGTCAGGT TTA ACCTGGCAG TTTGCTTAAAAGGAA TERM 2403 2416335 - 2416347 + g 75 -7.7 -4.15222 | CCATGGGGACGGTTT GGAAG AAA CTTCC TTTATTGCCCCCGGT TERM 2404 2417122 - 2417105 - g 75 -5.6 -4.74013 | overlap 2417110 TTTAAAGAGATAAAA GACCAT GGCCGT ATGGTC ACCCACCTGGTATCG TERM 2405 2417949 - 2417959 + G 73 -3.2 -4.94972 | GAGCGGGGTTAATTG TGCC TTT GGTA TTTTTAATTATCATA Ssed_1998 2416856 - 2418706 + | sodium/hydrogen exchanger TERM 2406 2418781 - 2418796 + T 77 -10.4 -3.26998 | opp_overlap 2418781 TCGAAAGTAAAAAAA GGAGGC TTTC GCCTCC TTCAATTCATTTACT TERM 2407 2418796 - 2418781 - T 100 -10.4 -5.72207 | opp_overlap 2418781 TCGAAAGTAAAAAAA GGAGGC TTTC GCCTCC TTCAATTCATTTACT Ssed_1999 2421288 - 2418841 - | acyl-CoA dehydrogenase Ssed_2000 2421529 - 2422308 + | glutamine amidotransferase, class-II TERM 2408 2422519 - 2422549 + G 71 -7.1 -4.05033 | gap 2, overlap 2422523 AAATAAGTGGTTTGG CAGTGGTGATGACAA ATT TTGTCAT-ACC-CTG TTTCTCTGGCCTGAA Ssed_2001 2422346 - 2422588 + | hypothetical protein Ssed_2002 2423445 - 2422678 - | hypothetical protein TERM 2409 2423617 - 2423632 + r 70 -2.6 -5.04601 | opp_overlap 2423610 ATATTCAACTCATCT GATAAG CTAA TTTATC TTTTTGATTTATAGA Ssed_2003 2424029 - 2423649 - | methylated-DNA-(protein)-cysteine S-methyltransferase Ssed_2004 2424216 - 2424902 + | hypothetical protein Ssed_2005 2426671 - 2424950 - | major facilitator transporter Ssed_2006 2426911 - 2427402 + | peptide deformylase Ssed_2007 2428931 - 2427516 - | putative two-component system sensor kinase Ssed_2008 2429089 - 2429613 + | DTW domain-containing protein TERM 2410 2429672 - 2429700 + T 93 -11 -5.0925 | opp_overlap 2429672 ATATTTCATAAAAAA TGCCGCCGGGAA GACTA TTCCTGACGGCA TTTTTAATTTTACGC TERM 2411 2429700 - 2429672 - T 100 -11 -5.26918 | opp_overlap 2429672 ATATTTCATAAAAAA TGCCGCCGGGAA GACTA TTCCTGACGGCA TTTTTAATTTTACGC Ssed_2009 2433242 - 2429778 - | hypothetical protein TERM 2412 2430310 - 2430274 - G 78 -11.1 -3.40403 | gap 1, overlap 2430285 CCGCTTGCACCACAA GACTCGACAAATAGCG CTGTGC CGCCATTTGT-GAGTC CCGGACCGTCTCCCA Ssed_2010 2434162 - 2433269 - | hypothetical protein Ssed_2011 2434913 - 2435023 + | hypothetical protein Ssed_2012 2435916 - 2435236 - | hemolysin III family channel protein TERM 2413 2435985 - 2436006 + H 83 -7.3 -4.68384 | overlap 2435988 TCAAAACACCATGAT TGAGCGTAC ACGT GTACGCTTG TTTTGTTGACTGCCT TERM 2414 2435988 - 2436003 + H 86 -9 -4.44914 | overlap 2435985 AAACACCATGATTGA GCGTAC ACGT GTACGC TTGTTTTGTTGACTG TERM 2415 2437289 - 2437306 + G 81 -11.3 -3.65522 | opp_overlap 2437287 TTGTCCGGCAAGAGG TGGCACG GGGA CGTGCCA TTATTCCGCTGAATA Ssed_2013 2436682 - 2438640 + | thiamine biosynthesis protein ThiC TERM 2416 2438678 - 2438652 - g 76 -11 -3.24188 | opp_overlap 2438658 CTAGACCATGACCAA TTTAGAGCTGAC GTC GTCAGCTTTAAA GCCTGTGGTTTGGAC TERM 2417 2438658 - 2438672 + G 74 -10 -3.56821 | opp_overlap 2438652 CATGACCAATTTAGA GCTGAC GTC GTCAGC TTTAAAGCCTGTGGT Ssed_2014 2438644 - 2440317 + | phosphomethylpyrimidine kinase, thiamine-phosphate diphosphorylase Ssed_2015 2440310 - 2441188 + | UBA/ThiF-type NAD/FAD binding protein Ssed_2016 2441175 - 2441420 + | thiamine biosynthesis protein ThiS Ssed_2017 2441422 - 2442186 + | thiazole biosynthesis family protein Ssed_2018 2442223 - 2443347 + | thiamine biosynthesis protein ThiH Ssed_2019 2443572 - 2443841 + | methyl-accepting chemotaxis protein TERM 2418 2443971 - 2443951 - g 73 -8.3 -3.80573 | CTCAGTATCATTAAA GAGTGATTC AGC GACTCACTC ATCGGCTAGCTCTTC TERM 2419 2445012 - 2445024 + G 73 -7.7 -4.07568 | opp_overlap 2445012 TGATAGATGCGCAAA CCATC ATA GATGG TTTTACCCCGCCAGA Ssed_2020 2443847 - 2445286 + | SrpA-related protein Ssed_2021 2446213 - 2445314 - | LysR family transcriptional regulator TERM 2420 2446476 - 2446449 - R 85 -11.4 -3.37236 | opp_overlap 2446446 2446449, overlap 2446452 AATTCAAGCGTATAA CAATGACCTGAT ATCC ATCAGGCCATCG TTGTTATGCTCTTGG TERM 2421 2446473 - 2446452 - R 83 -9.5 -3.82191 | opp_overlap 2446449 2446446, overlap 2446449 TCAAGCGTATAACAA TGACCTGAT ATCC ATCAGGCCA TCGTTGTTATGCTCT Ssed_2022 2447615 - 2446521 - | hypothetical protein Ssed_2023 2449317 - 2447569 - | response regulator receiver protein TERM 2422 2447789 - 2447767 - GR 71 -4.8 -4.55295 | opp_overlap 2447767, overlap 2447768 TGTTTGATAAACAAA GTTGGCCAGA GAC TCTTGCCAAA CATCTTGATAATAAA TERM 2423 2447788 - 2447768 - GR 70 -8.3 -3.32695 | opp_overlap 2447767, overlap 2447767 GTTTGATAAACAAAG TTGGCCAGA GAC TCTTGCCAA ACATCTTGATAATAA TERM 2424 2447958 - 2447936 - GR 74 -4.8 -4.7373 | overlap 2447940 GTATCGGAGTAAAAA TTGAGTGCGA CCT TCGCTCTAAA GACCTTTAGCTGTCG TERM 2425 2449259 - 2449242 - GR 72 -9.8 -2.97925 | AGGGGAGAGGAGATA CGGCGG ACAGAG CCGCCG AATTGACACTTAGGT Ssed_2024 2450242 - 2449280 - | alpha-L-glutamate ligase-like protein TERM 2426 2450081 - 2450069 - GR 72 -9.1 -3.36289 | opp_overlap 2450068 2450066 CACCACGCCAATTAA TGCCG GAA CGGCA ATATCATTAGCAATT Ssed_2025 2451756 - 2450245 - | gonadoliberin III-related protein TERM 2427 2450749 - 2450759 + g 80 -6.8 -4.72272 | opp_overlap 2450749 CAATACCGGCATAAA CGTC CCT GACG TTTTTAGTCCGACGA Ssed_2026 2452511 - 2451768 - | hypothetical protein Ssed_2027 2453602 - 2452610 - | putative methyltransferase Ssed_2028 2454437 - 2453706 - | putative methyltransferase TERM 2428 2455211 - 2455183 - g 73 -8.2 -3.85698 | overlap 2455186 2455187 CCTTTTTCCCATAAA GAACCGACTCTT GATAA AAGAGTCGCCTC TGCATCCGGCTGTTA TERM 2429 2455459 - 2455449 - g 88 -8.2 -5.00616 | opp_overlap 2455448 2455446 2455449 TGTGGTCTGAAAAAA CGGG GAT CCCG GTCTTCTTCTCGACA TERM 2430 2456163 - 2456187 + G 71 -8.7 -3.66178 | opp_overlap 2456167, overlap 2456167 TTAACAGTGAAGTTG TAAAGCTTATC TCA GATAAGCTTAA TTTGAAGTTAGAAGC TERM 2431 2456183 - 2456167 - g 74 -9.5 -3.61268 | opp_overlap 2456167 2456163 CAGTGAAGTTGTAAA GCTTATC TCA GATAAGC TTAATTTGAAGTTAG TERM 2432 2456167 - 2456183 + G 74 -9.5 -3.54489 | opp_overlap 2456167, overlap 2456163 CAGTGAAGTTGTAAA GCTTATC TCA GATAAGC TTAATTTGAAGTTAG Ssed_2029 2454584 - 2457382 + | diguanylate cyclase TERM 2433 2458378 - 2458392 + G 73 -5.6 -4.48987 | TAAGATGACCTTTGC CGAGGC GAT GCGTCG TTTTGGTTCTGACAA Ssed_2030 2457554 - 2459341 + | aspartyl-tRNA synthetase TERM 2434 2459351 - 2459372 + F 82 -10.8 -3.54638 | opp_overlap 2459345 2459350 GAGTAATAACCAGAT CGGCCGGG TGAATT CCCGGCTG TTTCGAGCCCATTGT Ssed_2031 2459429 - 2460175 + | hypothetical protein TERM 2435 2460412 - 2460400 - g 74 -9.1 -3.63515 | CTTTATGGCGAAGAA TGCCG ATT CGGCA CTTAAACTTGGCCAG Ssed_2032 2460179 - 2460700 + | crossover junction endodeoxyribonuclease Ssed_2033 2460697 - 2461314 + | Holliday junction DNA helicase RuvA TERM 2436 2461420 - 2461408 - g 72 -10.5 -3.07088 | opp_overlap 2461408 ATGAGCAGATAGACA GGGCG ATG CGCCC TAAGTTGCTCGATGA TERM 2437 2461578 - 2461555 - g 74 -11.1 -2.84325 | overlap 2461552 GGCTTGGAAAGACTA CATTGGCGA TGATTG TCGCCAATG AGATGGGGGTAAATA Ssed_2034 2461338 - 2462354 + | Holliday junction DNA helicase B TERM 2438 2462865 - 2462878 + G 80 -6.7 -4.74504 | opp_overlap 2462864 CTGAAGTCACGAATG CTCAG TATA CTGAG TTTTTAAATTCCGCT TERM 2439 2463088 - 2463072 - g 73 -3.7 -4.93661 | overlap 2463083 ATATTAATAATAAAA GTTGGAT ATC ATTCAAC AGTGAGTCCTTTGAA Ssed_2035 2462594 - 2463610 + | hypothetical protein TERM 2440 2465632 - 2465622 - g 73 -3.2 -4.87389 | TACGGTAAAAACAAA GCTA AAA CAGC GGTAGAAAACTCAAT TERM 2441 2466366 - 2466353 - g 73 -4.5 -4.81249 | overlap 2466354 CTTTAAAGTTAAAAA CGCGA TTGC TCGCA TGGATACACAAAATG Ssed_2036 2464419 - 2466944 + | TonB-dependent receptor TERM 2442 2466968 - 2466953 - T 76 -4.7 -5.08824 | GTTCTAGTGAAAAAA CATCG TTAACT CGATG GAGAAAAGCGCCGTA TERM 2443 2466976 - 2466989 + T 100 -9.5 -5.73339 | opp_overlap 2466976 ACTCGATGGAGAAAA GCGCC GTAA GGCGC TTTTTTTATGCTTGT TERM 2444 2466989 - 2466976 - T 90 -9.5 -4.42653 | opp_overlap 2466976 ACTCGATGGAGAAAA GCGCC GTAA GGCGC TTTTTTTATGCTTGT Ssed_2037 2467697 - 2467287 - | lactoylglutathione lyase TERM 2445 2468343 - 2468319 - R 90 -11.5 -4.12901 | opp_overlap 2468325, overlap 2468325 GAAAATGCAGATAAA TAAAAAGCCGC TAT GCGGCTTTTTT TGTTTCGGATAATGC TERM 2446 2468325 - 2468337 + r 100 -10.5 -5.95539 | opp_overlap 2468319 2468325 GCAGATAAATAAAAA GCCGC TAT GCGGC TTTTTTTGTTTCGGA TERM 2447 2468337 - 2468325 - R 100 -10.5 -5.42975 | opp_overlap 2468325, overlap 2468319 GCAGATAAATAAAAA GCCGC TAT GCGGC TTTTTTTGTTTCGGA Ssed_2038 2468997 - 2468359 - | DNA-(apurinic or apyrimidinic site) lyase Ssed_2039 2469740 - 2469030 - | SoxR-reducing system protein RsxE Ssed_2040 2470363 - 2469737 - | electron transport complex protein RnfG TERM 2448 2470338 - 2470327 - G 76 -2.2 -5.31275 | GTGCAGTACAAAAAA GTGC GAAT ACAC CCAGTAGCAAACCGT TERM 2449 2470405 - 2470425 + r 71 -7.5 -3.86916 | overlap 2470406 TGCTTAAGTCGCTGA TCTATGGCC GTA GGCCCTAGG TTTCATGTAATGATC Ssed_2041 2471445 - 2470393 - | electron transport complex, RnfABCDGE type, D subunit Ssed_2042 2473977 - 2471449 - | electron transport complex protein RnfC TERM 2450 2472302 - 2472318 + g 77 -6.5 -4.64861 | GTAGGCTGTGAATGG CCTGAGG CGT CATCAGG TTTATTTTGCGCGGC Ssed_2043 2474540 - 2473971 - | electron transport complex, RnfABCDGE type, B subunit Ssed_2044 2475121 - 2474543 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2451 2474812 - 2474838 + g 74 -4.4 -5.00616 | gap 1 GAGGAAGGTATATCC CCAGAGCC-CT GTAGAG AGAGGCACTGG TTTTTTGGACAAGCA Ssed_2045 2477128 - 2475230 - | diguanylate cyclase/phosphodiesterase TERM 2452 2478371 - 2478349 - H 83 -9.2 -4.03978 | opp_overlap 2478349 AAGTCGTGAGATAAA GTCGTTTACT TGT AGTAAGCGAC TTTTGAGCGGGGATG TERM 2453 2478349 - 2478371 + H 90 -11.4 -4.07885 | opp_overlap 2478349 AAGTCGTGAGATAAA GTCGTTTACT TGT AGTAAGCGAC TTTTGAGCGGGGATG Ssed_2046 2479256 - 2481283 + | excinuclease ABC subunit B TERM 2454 2481295 - 2481319 + T 93 -11.5 -4.1964 | overlap 2481297 ATAAGAGTTGAAGGT TGTGGGGCTTA GCT TAGGCCCCATA TTTTCAGATATTGAC TERM 2455 2481297 - 2481317 + T 89 -11.9 -3.69449 | overlap 2481295 AAGAGTTGAAGGTTG TGGGGCTTA GCT TAGGCCCCA TATTTTCAGATATTG Ssed_2047 2481838 - 2481323 - | rhomboid family protein TERM 2456 2481878 - 2481853 - R 74 -9 -3.50492 | TAGCATACAGGAGAA TGCAGCACAG GCTGAT CAGTGCTGCA ATGAGATAACTACTG Ssed_2048 2482633 - 2481935 - | ExsB protein Ssed_2049 2482821 - 2483489 + | radical activating enzyme Ssed_2050 2484547 - 2483486 - | pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 2457 2483907 - 2483896 - G 71 -4.4 -4.66318 | AGTAGTCGAAGAAAA CTGA GTTT TCAG GGTCAACAACACAGA TERM 2458 2484076 - 2484046 - G 85 -7.7 -4.7373 | gap 1, opp_overlap 2484045 TCATCTGATCAAAAA TGGAGTTGGCAATA TTAT TATTGCC-ACGCCA ATCTGTTGCCCGCTC TERM 2459 2484692 - 2484708 + H 84 -7.9 -4.67353 | opp_overlap 2484692, overlap 2484694 TCGGATGCACTAAAA CTCGCCT GTT AGGCGTG TTTTTGGCTGCCTAC TERM 2460 2484708 - 2484692 - H 77 -7.9 -4.2828 | opp_overlap 2484692 2484694 TCGGATGCACTAAAA CTCGCCT GTT AGGCGTG TTTTTGGCTGCCTAC TERM 2461 2484694 - 2484706 + H 79 -9.1 -3.95214 | opp_overlap 2484692, overlap 2484692 GGATGCACTAAAACT CGCCT GTT AGGCG TGTTTTTGGCTGCCT TERM 2462 2485738 - 2485761 + H 83 -3.2 -5.60993 | opp_overlap 2485740, overlap 2485740 AAGCGGTCGATTAAC TATCAACGAG TTGA TTTGTTGATG TTTTTTTATGCAGCC Ssed_2051 2485769 - 2486272 + | hypothetical protein Ssed_2052 2486551 - 2486838 + | hypothetical protein TERM 2463 2486994 - 2486977 - f 80 -11.3 -2.89565 | opp_overlap 2486977, overlap 2486974 AATTTGAGACAACCA GCAAGCC ATTT GGCTTGC TACTTCAAGGACATT TERM 2464 2486977 - 2486994 + F 79 -11.3 -2.71263 | opp_overlap 2486977 2486974 AATTTGAGACAACCA GCAAGCC ATTT GGCTTGC TACTTCAAGGACATT TERM 2465 2488687 - 2488697 + G 73 -2.4 -5.00884 | TGCACGTTAATGTGT CCGC AAG GCAG TTTTTTAGCGGCAAT Ssed_2053 2487012 - 2489180 + | putative diguanylate phosphodiesterase Ssed_2054 2489720 - 2489235 - | SecC motif-containing protein Ssed_2055 2490279 - 2489710 - | hypothetical protein Ssed_2056 2490380 - 2490970 + | Smr protein/MutS2 TERM 2466 2491017 - 2491039 + T 100 -12.1 -5.15969 | opp_overlap 2491017 TAGCTTTTAAAAAAA CGCTCAACA GTAAA TGTTGAGCG TTTTTTACATTACCA TERM 2467 2491039 - 2491017 - T 100 -12.1 -5.41143 | opp_overlap 2491017 TAGCTTTTAAAAAAA CGCTCAACA GTAAA TGTTGAGCG TTTTTTACATTACCA Ssed_2057 2492906 - 2491071 - | peptidyl-dipeptidase A Ssed_2058 2494318 - 2493092 - | NAD/FAD-binding protein-like protein TERM 2468 2493837 - 2493853 + g 91 -6.6 -5.28481 | opp_overlap 2493839 GTAAATAGTTTTAAC CAGGTA TTTTT TACCTG TTTTTTACTTACGTA Ssed_2059 2495885 - 2494356 - | hypothetical protein Ssed_2060 2496175 - 2496774 + | hypothetical protein TERM 2469 2496823 - 2496857 + F 79 -8.6 -4.02315 | opp_overlap 2496822 2496827 2496828, overlap 2496829 CTCCTTGGTTAAGAG TAAAGGGGTCAGCGCA GGT TGCACCGACCTTTTTA TTTCAATTTTTAATT TERM 2470 2496829 - 2496851 + F 90 -7.6 -5.34381 | opp_overlap 2496828 2496827 2496822, overlap 2496823 GGTTAAGAGTAAAGG GGTCAGCGCA GGT TGCACCGACC TTTTTATTTCAATTT Ssed_2061 2497101 - 2497325 + | hypothetical protein TERM 2471 2497514 - 2497524 + G 73 -3.2 -4.84918 | TGATGGCATTGAGTG GGTG GGC TACC TTTTATCTTTCTGGC Ssed_2062 2497435 - 2498352 + | hypothetical protein Ssed_2063 2498422 - 2498889 + | hypothetical protein Ssed_2064 2498889 - 2499740 + | alpha/beta fold family hydrolase Ssed_2065 2501222 - 2499849 - | NadC family transporter TERM 2472 2500026 - 2500005 - G 81 -13.1 -2.69246 | overlap 2500000 CATAAAGGCACATGA GGCACTGAT ACCT ATCAGTGCC GACAGGATCACAGGT Ssed_2066 2501969 - 2502604 + | TetR family transcriptional regulator TERM 2473 2504753 - 2504743 - g 76 -2.4 -5.31545 | AAGAAGATCAAAAAA GCTC AGC GTGC GGGAACCTTACCTAA Ssed_2067 2502628 - 2504904 + | acyl-CoA dehydrogenase TERM 2474 2504954 - 2504970 + T 100 -12.3 -6.06529 | opp_overlap 2504954 GACTAGATTGAGAAA GGTACCC GTT GGGTACC TTTTTTTTATCTGTA TERM 2475 2504970 - 2504954 - T 93 -12.3 -3.95787 | opp_overlap 2504954 GACTAGATTGAGAAA GGTACCC GTT GGGTACC TTTTTTTTATCTGTA TERM 2476 2505198 - 2505215 + T 93 -11.3 -4.18488 | opp_overlap 2505198 GCAGGCAAAAAAAAA GGTACGC CTGA GCGTACC TTTCTTAGAATGAAT TERM 2477 2505215 - 2505198 - T 100 -11.3 -6.11644 | opp_overlap 2505198 GCAGGCAAAAAAAAA GGTACGC CTGA GCGTACC TTTCTTAGAATGAAT Ssed_2068 2506677 - 2505238 - | pyruvate kinase Ssed_2069 2507716 - 2506862 - | DNA-binding transcriptional regulator HexR Ssed_2070 2508026 - 2509498 + | glucose-6-phosphate 1-dehydrogenase Ssed_2071 2509511 - 2510209 + | hypothetical protein TERM 2478 2512023 - 2512005 - g 91 -13.2 -3.56568 | TAAGTAGTCCGGAAA CTGGTGCA CGC TGCACCAG CGCTATCGATGAAAA Ssed_2072 2510219 - 2512045 + | phosphogluconate dehydratase Ssed_2073 2512063 - 2512704 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2479 2512759 - 2512778 + T 100 -12.2 -5.23396 | opp_overlap 2512759 CATTGCGTACAGAAA GGCTATCC ATTC GGATAGCC TTTTTATTGCTTATT TERM 2480 2512778 - 2512759 - T 91 -12.2 -4.0371 | opp_overlap 2512759 CATTGCGTACAGAAA GGCTATCC ATTC GGATAGCC TTTTTATTGCTTATT Ssed_2074 2513364 - 2512795 - | ecotin precursor TERM 2481 2513568 - 2513540 - H 81 -11.3 -3.06302 | opp_overlap 2513537 2513543, overlap 2513543 ATTATTTCTATTTAA CAATATACTTTGA TTA TCAAAGTATATTA CTATTAGTTAAGTTT TERM 2482 2513543 - 2513565 + H 80 -10.8 -3.42147 | opp_overlap 2513543 2513540, overlap 2513537 ATTTCTATTTAACAA TATACTTTGA TTA TCAAAGTATA TTACTATTAGTTAAG TERM 2483 2513565 - 2513543 - H 83 -10.8 -3.67775 | opp_overlap 2513537 2513543, overlap 2513540 ATTTCTATTTAACAA TATACTTTGA TTA TCAAAGTATA TTACTATTAGTTAAG Ssed_2075 2513731 - 2514756 + | cation diffusion facilitator family transporter TERM 2484 2514808 - 2514828 + G 83 -9.1 -4.3739 | opp_overlap 2514808 TCTACAGAAGATAAA CTTAACCAT GTG ATGGTTGAG TTTTATGAAAAACTA TERM 2485 2514828 - 2514808 - g 71 -6.9 -4.31164 | opp_overlap 2514808 TCTACAGAAGATAAA CTTAACCAT GTG ATGGTTGAG TTTTATGAAAAACTA Ssed_2076 2514787 - 2515206 + | MarR family transcriptional regulator TERM 2486 2515223 - 2515249 + F 75 -10.2 -3.06915 | CTGTTTCATTTTTCG GGCCGATACT CCCCAAA GGTATCGGCC TTCACTCAAATAGGT TERM 2487 2515657 - 2515633 - g 71 -5 -4.60889 | opp_overlap 2515634, overlap 2515634 AAGTATCGGCAAAAA TTCTCAGGCA TGCGG TGCCTAAGAT GTCTGAACACAATAT Ssed_2077 2515587 - 2516618 + | diguanylate cyclase TERM 2488 2516633 - 2516655 + T 100 -17.8 -3.73775 | opp_overlap 2516633 2516637 GCATCTTTTTTAAGA CGAAGGCTCC ATC GGAGCCTTCG TTTGATAACAGTAAC TERM 2489 2516655 - 2516633 - T 100 -17.8 -3.02144 | opp_overlap 2516633, overlap 2516637 GCATCTTTTTTAAGA CGAAGGCTCC ATC GGAGCCTTCG TTTGATAACAGTAAC TERM 2490 2516651 - 2516637 - T 85 -11.4 -3.36273 | opp_overlap 2516633, overlap 2516633 CTTTTTTAAGACGAA GGCTCC ATC GGAGCC TTCGTTTGATAACAG Ssed_2078 2519387 - 2516697 - | GCN5-related N-acetyltransferase Ssed_2079 2520760 - 2519819 - | lipid kinase TERM 2491 2520265 - 2520281 + g 73 -2.3 -5.08824 | opp_overlap 2520261 CTGAGATGAAATAGG CTTGT CCGCCTA ACAAG TTTTTTAACTCGACA Ssed_2080 2521360 - 2522475 + | cobalamin biosynthesis protein Ssed_2081 2522475 - 2523131 + | precorrin-8X methylmutase Ssed_2082 2523128 - 2524384 + | precorrin-6Y C(5,15)-methyltransferase (decarboxylating) Ssed_2083 2524381 - 2525139 + | precorrin-2 methyltransferase Ssed_2084 2525139 - 2526665 + | cobalamin biosynthesis protein CbiG-like protein TERM 2492 2527378 - 2527361 - g 71 -8.5 -3.66356 | opp_overlap 2527370 ACCCTCAAGGCTAAA TTTACCG GTGC CGGTAAA GTCCGGCTCATTCCC Ssed_2085 2526776 - 2527591 + | cobalamin biosynthesis protein CbiK Co2+ chelatase-like protein TERM 2493 2528080 - 2528102 + G 71 -9 -3.58536 | overlap 2528081 TTGATCGAGCGTCGG GTCGCCGCGG CCG CCGTGGCGGA TTTCGCGATCACTTT TERM 2494 2528081 - 2528101 + G 78 -12.5 -2.7464 | overlap 2528080 TGATCGAGCGTCGGG TCGCCGCGG CCG CCGTGGCGG ATTTCGCGATCACTT Ssed_2086 2527588 - 2528451 + | precorrin-3B C(17)-methyltransferase Ssed_2087 2528448 - 2529221 + | precorrin-3 methylase TERM 2495 2529254 - 2529267 + G 70 -9.5 -3.23393 | overlap 2529252 CTGGTTGGAGCTGGC CCGGG AGAT CCCGG TCTTCTGACCTGGCG Ssed_2088 2529218 - 2530585 + | uroporphyrinogen-III methylase-like protein TERM 2496 2530742 - 2530771 + G 73 -8.7 -3.84712 | overlap 2530741 GAGGGGGGTATTGGC GGTGATATTGGTG TTAT TACCGATATTACC TTTCCTCTGGGCTTC Ssed_2089 2530575 - 2531480 + | cobD; cobalamin biosynthetic protein Ssed_2090 2531477 - 2532595 + | cobalamin biosynthetic protein CobC TERM 2497 2532670 - 2532635 - f 75 -10.5 -3.1733 | gap 1, overlap 2532633 2532632 TCCCCGATAAAAGCA CGCCAGC-CCCAAC TCTATGCCT GTCGGGGGCTGGCG AAGATAAATATGACG TERM 2498 2533472 - 2533487 + G 78 -7.6 -4.371 | opp_overlap 2533466 2533472 TTCATGGAAGAGAGA TCAACC CTCT GGTTGA TTTTAATATCGTGAA Ssed_2091 2532946 - 2533683 + | hypothetical protein TERM 2499 2533821 - 2533798 - f 71 -6.8 -4.08394 | overlap 2533802 ATACTTGGCGCAAAA TTTACTGTGA AAAC TCACAGTGAA GGAGAAATGCATCTG Ssed_2092 2534170 - 2534940 + | ABC cobalt transporter, periplasmic binding protein CbiN TERM 2500 2535329 - 2535341 + G 82 -5.5 -5.02074 | GACATCATATCCCTG CTCAG TTA CTGGG TTTTTTGGCCGGTAG Ssed_2093 2534950 - 2535555 + | cobalamin (vitamin B12) biosynthesis CbiM protein Ssed_2094 2535548 - 2536108 + | hypothetical protein Ssed_2095 2536105 - 2536872 + | ABC-type cobalt transport system permease component CbiQ and related transporter-like protein Ssed_2096 2536919 - 2537584 + | ABC transporter related TERM 2501 2538062 - 2538074 + G 71 -6.3 -4.19887 | opp_overlap 2538060 2538062 TACAGATTTTAAATA TGAAG GCG CTTCA TTATTCTTTATCTGT Ssed_2097 2537859 - 2538755 + | hypothetical protein TERM 2502 2538849 - 2538829 - T 70 -8.3 -3.42013 | opp_overlap 2538829 AGTGTAGAAGATGAA GGCAACG GTGATGA CGTTGCC TTGTTGGTATGTTGA TERM 2503 2538829 - 2538849 + T 77 -8.3 -3.82205 | opp_overlap 2538829 AGTGTAGAAGATGAA GGCAACG GTGATGA CGTTGCC TTGTTGGTATGTTGA Ssed_2098 2539675 - 2538866 - | hypothetical protein Ssed_2099 2540897 - 2540616 - | reductive dehalogenase anchoring protein, putative Ssed_2100 2542328 - 2540904 - | tetrachloroethene dehalogenase Ssed_2101 2543368 - 2542457 - | hypothetical protein TERM 2504 2544268 - 2544256 - g 77 -6.3 -4.63048 | GTTATAAATAATAAA CATCA CAT TGATG CTGCTGAATTTGACA Ssed_2102 2543947 - 2545056 + | hypothetical protein Ssed_2103 2545094 - 2546617 + | hypothetical protein Ssed_2104 2546617 - 2546925 + | hypothetical protein Ssed_2105 2547010 - 2548236 + | hypothetical protein TERM 2505 2548867 - 2548879 + G 73 -2 -5.08824 | GGATCCGTTCGGCTT TTGA AGACA TCAA TTTTTTGCATGAAAA Ssed_2106 2548518 - 2549393 + | hypothetical protein Ssed_2107 2550251 - 2549490 - | amino acid ABC transporter periplasmic protein TERM 2506 2549984 - 2550003 + g 74 -4.2 -4.84274 | opp_overlap 2549985, overlap 2549985 AATTTCGGCTAAATA TGGCAAAG TCAG CGTTGCCG TTTTTAATGTAATTA Ssed_2108 2550465 - 2551034 + | fructose-2 6-bisphosphatase-like protein TERM 2507 2551079 - 2551095 + F 75 -9.5 -3.35197 | TATTAGATAATTTTT TGAAGGT TAT ACCTTCA TTGCTATCTATCACC TERM 2508 2551397 - 2551383 - f 73 -5.7 -4.52589 | opp_overlap 2551383 CTTTGCCATATAAAA GCTCA TGCGC TGAGC TTACTGCTCCGCATC TERM 2509 2551752 - 2551775 + F 73 -7 -4.21438 | ATCTTCTTACCATCC TTTTTAAATA AATT TATTTAAAAA TTATTTATTGGAGTG Ssed_2109 2551794 - 2552438 + | hypothetical protein TERM 2510 2552497 - 2552447 - f 79 -10.8 -3.20218 | gap 1, opp_overlap 2552447 2552460, overlap 2552443 2552459 2552460 TGATTAAAAACTATA GGTAGAAATAAAGCTCGTATCTT ATGATA AAGATACGAG-TTTCTTTCTGCC CTTATCAGAAACTCT TERM 2511 2552447 - 2552497 + F 90 -13 -2.57683 | gap 1, opp_overlap 2552447 2552443 2552459 2552460, overlap 2552460 TGATTAAAAACTATA GGTAGAAATAAAGCTCGTATCTT ATGATA AAGATACGAG-TTTCTTTCTGCC CTTATCAGAAACTCT TERM 2512 2552486 - 2552459 - f 81 -7.1 -4.58085 | opp_overlap 2552447 2552460, overlap 2552447 2552443 2552460 ATAGGTAGAAATAAA GCTCGTATCTT ATGATA AAGATACGAGT TTCTTTCTGCCCTTA TERM 2513 2552460 - 2552485 + F 91 -10.6 -4.56969 | opp_overlap 2552459 2552447 2552443 2552460, overlap 2552447 TAGGTAGAAATAAAG CTCGTATCTT ATGATA AAGATACGAG TTTCTTTCTGCCCTT TERM 2514 2552485 - 2552460 - f 80 -10.6 -3.33766 | opp_overlap 2552460 2552447, overlap 2552459 2552447 2552443 TAGGTAGAAATAAAG CTCGTATCTT ATGATA AAGATACGAG TTTCTTTCTGCCCTT TERM 2515 2553229 - 2553243 + F 91 -6.4 -5.4505 | overlap 2553230 AGTTGAGTCTTTTTG TCGACA ATG TGTCGG TTTTTTATTGACCAG TERM 2516 2553230 - 2553242 + F 73 -7.7 -3.86307 | overlap 2553229 GTTGAGTCTTTTTGT CGACA ATG TGTCG GTTTTTTATTGACCA Ssed_2110 2553316 - 2553978 + | GntR family transcriptional regulator TERM 2517 2554366 - 2554353 - g 75 -5.2 -4.70659 | opp_overlap 2554354, overlap 2554354 CGTGATATGGAAAAA GCCG GCGCTG CGGC GGTTCATATGGAAGA Ssed_2111 2554047 - 2554925 + | 2-methylisocitrate lyase TERM 2518 2555445 - 2555423 - g 71 -9.1 -3.45073 | opp_overlap 2555423 2555422, overlap 2555421 2555431 ACGGAGCAAAACAGA GCGGCAAAC CGGCT GTTAGCCGC GTTTCCTGCCATCAT Ssed_2112 2555063 - 2556187 + | 2-methylcitrate synthase TERM 2519 2556220 - 2556195 - f 100 -16.3 -3.33605 | opp_overlap 2556190, overlap 2556188 AAAGATAAGCAGTAA GGTCCTGAGAT AGCC ATCTCAGGACC ACAAATCCTTTCGAT Ssed_2113 2556254 - 2558860 + | aconitate hydratase TERM 2520 2558922 - 2558884 - f 82 -11.6 -3.16564 | opp_overlap 2558886 GGTTGATGGCAGTAA GTGCGCCGGATTTGAGCT TTT AGCGCTAATCCGGCGCTT GTTTAACCCTCTCAA TERM 2521 2558886 - 2558920 + F 100 -18.6 -3.93256 | opp_overlap 2558884 TTGATGGCAGTAAGT GCGCCGGATTTGAGCT TTT AGCGCTAATCCGGCGC TTGTTTAACCCTCTC Ssed_2114 2558973 - 2560190 + | putative AcnD-accessory protein PrpF TERM 2522 2560314 - 2560275 - T 100 -4.6 -6.20267 | gap 3, opp_overlap 2560275 CTAAAAACAAAAAAA CTGTCACTCATTTGTTCTC TATAG GAGAACA--TG-GTGACAG CTTTTACGTGTTATC Ssed_2115 2562017 - 2560368 - | ABC transporter ATPase Ssed_2116 2562300 - 2562800 + | hypothetical protein TERM 2523 2562845 - 2562880 + T 100 -17.8 -5.4505 | opp_overlap 2562843 GAGCAGTACAGTAGG GCGCCGTTTTTATCTT AATT GAGATAAAAGCGGCGC TTTTTTATTGGAAGA TERM 2524 2562973 - 2562960 - T 89 -4.5 -5.64274 | opp_overlap 2562960 TCAGGCATAAAAAAA CCAAC TTTT GCTGG ATTGATCTTCTCTAA TERM 2525 2563299 - 2563286 - T 100 -6.7 -5.64274 | TCAGGCATAAAAAAA CCAAC TTTC GTTGG CCTGTGATCTCTGCT TERM 2526 2564249 - 2564296 + T 75 -10.1 -3.06183 | overlap 2564262 GCGGAAGCCGGATTA CTTTTTATAAGGGCAGGGCAA CGACCT TCGCCTTGTTCTTATAAAGAG TTGAGTCCGAGTAGC TERM 2527 2564513 - 2564534 + T 77 -9.5 -3.5393 | gap 1, opp_overlap 2564513 2564510 ATACGACATATACGA GGAGGAA-CC CGC GGATTCCTCC TTTGAAAAGCATGAT TERM 2528 2564534 - 2564513 - T 76 -10.9 -2.74038 | opp_overlap 2564513, overlap 2564510 ATACGACATATACGA GGAGGAACC CGCG GATTCCTCC TTTGAAAAGCATGAT Ssed_2117 2565933 - 2564557 - | MATE efflux family protein TERM 2529 2565359 - 2565344 - G 83 -9 -4.42765 | overlap 2565346 GCCCAAAAAACCAAA GCGGTA GCGA TACCGC AACCCGCACCACCCA Ssed_2118 2565948 - 2566580 + | riboflavin synthase subunit alpha Ssed_2119 2566822 - 2566622 - | hypothetical protein TERM 2530 2568372 - 2568360 - g 83 -4.1 -5.36441 | overlap 2568364 TGGGCAGACAAAAAA GCACT TAA AGTAC ACCTTAACCGTCTGG TERM 2531 2568579 - 2568561 - g 71 -4.5 -4.5774 | opp_overlap 2568560 2568555 TACCAAGAAGTAAAA GGTCCGT TGATG ATGGACC GTGTGCTTTGGGAAC Ssed_2120 2567679 - 2569607 + | threonyl-tRNA synthetase Ssed_2121 2569818 - 2570153 + | translation initiation factor IF-3 Ssed_2122 2570237 - 2570431 + | 50S ribosomal protein L35 Ssed_2123 2570450 - 2570809 + | 50S ribosomal protein L20 TERM 2532 2570833 - 2570848 + T 100 -10.4 -5.4251 | opp_overlap 2570833 TACATCTATTAAAAA GGGACC TTCG GGTCCC TTTTTTGTGTCTGGA TERM 2533 2570848 - 2570833 - T 93 -10.4 -4.76041 | opp_overlap 2570833 TACATCTATTAAAAA GGGACC TTCG GGTCCC TTTTTTGTGTCTGGA TERM 2534 2571037 - 2571053 + T 73 -8 -3.94868 | opp_overlap 2571037 CTAGCGCAAAAAAAA GCAGAC CCTAA GTCTGC TTTAAATTTATTGTA TERM 2535 2571053 - 2571037 - T 100 -8.7 -5.78622 | opp_overlap 2571037 CTAGCGCAAAAAAAA GCAGACC CTA AGTCTGC TTTAAATTTATTGTA Ssed_2124 2572033 - 2571083 - | thioredoxin reductase TERM 2536 2571987 - 2571967 - G 70 -7.6 -3.87815 | gap 1, opp_overlap 2571957 CGCGAGCGGCATAAA CTGC-GGCT GTAT AGCCTGCAG GGCCTGACCCTAATA TERM 2537 2572142 - 2572126 - R 100 -13.7 -4.74103 | opp_overlap 2572126 GCTCTAATCGAAAAA GGGAGCC TAT GGCTCCC TTTGATTGTCTTAAC TERM 2538 2572126 - 2572142 + r 100 -13.7 -4.08221 | opp_overlap 2572126 GCTCTAATCGAAAAA GGGAGCC TAT GGCTCCC TTTGATTGTCTTAAC Ssed_2125 2573284 - 2572169 - | alanine dehydrogenase TERM 2539 2573238 - 2573252 + g 77 -4.2 -5.13137 | overlap 2573239 GAAGGGACCATTCCA ACACGA TAC TCGTGG TTTTTGATTTCTTTA TERM 2540 2573324 - 2573310 - H 79 -5.7 -4.89393 | opp_overlap 2573310 2573308 CAAATTGCATAAAAA CCCAT TTTTT ATGGG TGTAATTGTTATTTT Ssed_2126 2573465 - 2573968 + | leucine-responsive transcriptional regulator TERM 2541 2574010 - 2573993 - f 95 -11.3 -4.87626 | opp_overlap 2573993 CTGTAATACCAAAAA GGAGCCA ACTA TGGCTCC TTTTTTTATCTTGTT TERM 2542 2573993 - 2574010 + F 100 -11.3 -5.86465 | opp_overlap 2573993 CTGTAATACCAAAAA GGAGCCA ACTA TGGCTCC TTTTTTTATCTTGTT Ssed_2127 2574152 - 2576665 + | cell division protein FtsK/SpoIIIE TERM 2543 2576707 - 2576724 + F 79 -11.3 -2.63596 | opp_overlap 2576707 2576706 TGAATAGATATTAAT CTCCTGC CCAT GCAGGAG TCATCTCCAATAACG TERM 2544 2576724 - 2576707 - f 79 -11.3 -2.62255 | opp_overlap 2576707, overlap 2576706 TGAATAGATATTAAT CTCCTGC CCAT GCAGGAG TCATCTCCAATAACG Ssed_2128 2576780 - 2577406 + | outer membrane lipoprotein carrier protein LolA TERM 2545 2577638 - 2577606 - g 91 -12.1 -3.82946 | GTACCGGAAAGACAA CGTTGGCAGAGTTAG TGG CTAACTATGCCAATG CGCATGTCGAACGCA TERM 2546 2578254 - 2578268 + G 76 -8.6 -4.0371 | opp_overlap 2578256 GCCGAATGTTGGAAG GAGGAT GTG ATCCTC TTTATATCGCACGTC Ssed_2129 2577416 - 2578747 + | recombination factor protein RarA Ssed_2130 2578740 - 2579114 + | CrcB protein TERM 2547 2579643 - 2579631 - g 76 -9.1 -3.80573 | overlap 2579638 2579639 TTCATTATCATGAAA GGGCA AAT TGCCC GCATGAACAGAGCAC Ssed_2131 2579133 - 2580419 + | seryl-tRNA synthetase TERM 2548 2580749 - 2580776 + T 91 -6.3 -5.46657 | opp_overlap 2580749 CCTGAAAAGCGAAAA CCCGAAATTTC ATTATA GAAGCTTCGGG TTTTTTATTGAAATA TERM 2549 2580776 - 2580749 - T 74 -6.3 -4.4267 | opp_overlap 2580749 CCTGAAAAGCGAAAA CCCGAAATTTC ATTATA GAAGCTTCGGG TTTTTTATTGAAATA Ssed_2132 2581189 - 2580854 - | DsrC family protein Ssed_2133 2581515 - 2581300 - | DsrH family protein Ssed_2134 2581961 - 2581581 - | DsrE family protein Ssed_2135 2582397 - 2582008 - | DsrE family protein TERM 2550 2582445 - 2582464 + r 77 -10 -3.35996 | opp_overlap 2582445 AGGCAGGCAAAAAAA TAGCCCCG ATAA TGGGGCTA TTCTAACTGAAAATG TERM 2551 2582464 - 2582445 - R 95 -9.3 -5.47821 | opp_overlap 2582445 AGGCAGGCAAAAAAA TAGCCCC GATAAT GGGGCTA TTCTAACTGAAAATG Ssed_2136 2583222 - 2582563 - | hypothetical protein Ssed_2137 2584374 - 2583472 - | putative DNA-binding transcriptional regulator TERM 2552 2584980 - 2584993 + G 74 -3.1 -5.10154 | TACTTGAAATTAGTG GATGG CCGA CTATC TTTTTGATTTTAACT Ssed_2138 2584412 - 2585752 + | inner membrane transport protein YdhC TERM 2553 2585936 - 2585969 + T 100 -16.1 -2.79175 | opp_overlap 2585942, overlap 2585942 TCTCCGCCACATTTA GATGAAGCCCCAGCA GAAA TGCTGGGGCTTTTTC GTTTCAGAATTTGTT TERM 2554 2585942 - 2585963 + T 100 -15.9 -4.98531 | opp_overlap 2585942, overlap 2585936 CCACATTTAGATGAA GCCCCAGCA GAAA TGCTGGGGC TTTTTCGTTTCAGAA TERM 2555 2585963 - 2585942 - T 100 -15.9 -3.28912 | opp_overlap 2585936 2585942 CCACATTTAGATGAA GCCCCAGCA GAAA TGCTGGGGC TTTTTCGTTTCAGAA TERM 2556 2586053 - 2586088 + T 100 -14.2 -3.28209 | opp_overlap 2586060, overlap 2586060 CTCCGCCACATTCAA GACGAAAGGCTCATCA GAAA TGATGAGCCTTTTTTC GTTTTATAAATTAAT TERM 2557 2586060 - 2586081 + T 100 -13.1 -5.50313 | opp_overlap 2586060, overlap 2586053 ACATTCAAGACGAAA GGCTCATCA GAAA TGATGAGCC TTTTTTCGTTTTATA TERM 2558 2586081 - 2586060 - T 100 -13.1 -3.94184 | opp_overlap 2586053 2586060 ACATTCAAGACGAAA GGCTCATCA GAAA TGATGAGCC TTTTTTCGTTTTATA TERM 2559 2586193 - 2586214 + T 90 -8.7 -4.93696 | opp_overlap 2586193, overlap 2586187 TCGCATTCAGATGAA GCCCCAG CGGAAATA CTGGGGC TTTTTCGTATTTGGC TERM 2560 2586214 - 2586193 - T 75 -9.4 -3.2794 | opp_overlap 2586187 2586193 TCGCATTCAGATGAA GCCCCAGC GGAAAT ACTGGGGC TTTTTCGTATTTGGC TERM 2561 2586346 - 2586325 - T 100 -13.1 -4.03321 | opp_overlap 2586325 ACATTAAAGACGAAA GGCTCATCA GAAA TGATGAGCC TTTTTTCGTATTAAA TERM 2562 2586325 - 2586346 + T 100 -13.1 -5.27779 | opp_overlap 2586325 ACATTAAAGACGAAA GGCTCATCA GAAA TGATGAGCC TTTTTTCGTATTAAA TERM 2563 2586457 - 2586424 - T 100 -15.5 -3.25823 | opp_overlap 2586429, overlap 2586429 TCTCCGCCACATTAA GAAAAGCCCGATATC GTAA GATATCGGGCTTTTT GCTATCTGGTGGTCA TERM 2564 2586452 - 2586429 - T 100 -15.4 -4.75472 | opp_overlap 2586429, overlap 2586424 GCCACATTAAGAAAA GCCCGATATC GTAA GATATCGGGC TTTTTGCTATCTGGT TERM 2565 2586429 - 2586452 + T 100 -15.4 -4.85129 | opp_overlap 2586424 2586429 GCCACATTAAGAAAA GCCCGATATC GTAA GATATCGGGC TTTTTGCTATCTGGT TERM 2566 2586565 - 2586598 + T 86 -11.7 -3.28209 | opp_overlap 2586571, overlap 2586571 CCTCCGCCATATTAA GATGAAGCCCCTGCA GAAA TGCTGGGGCTTTTTC GTTTTATAAATTAAT TERM 2567 2586571 - 2586592 + T 95 -11.5 -5.1417 | opp_overlap 2586571, overlap 2586565 CCATATTAAGATGAA GCCCCTGCA GAAA TGCTGGGGC TTTTTCGTTTTATAA TERM 2568 2586592 - 2586571 - T 85 -11.5 -3.40907 | opp_overlap 2586565 2586571 CCATATTAAGATGAA GCCCCTGCA GAAA TGCTGGGGC TTTTTCGTTTTATAA TERM 2569 2586717 - 2586738 + T 73 -5.7 -4.49756 | opp_overlap 2586717 2586711, overlap 2586726 CGGGAATAAGATGAA GCCCCAACA GAAA TGCCGGGGC TTTTCGTATTTAAGG TERM 2570 2586738 - 2586717 - T 79 -10.1 -3.46509 | opp_overlap 2586717 2586726, overlap 2586711 CGGGAATAAGATGAA GCCCCAACA GAAA TGCCGGGGC TTTTCGTATTTAAGG Ssed_2139 2588008 - 2586794 - | hypothetical protein TERM 2571 2588282 - 2588306 + r 91 -13.6 -2.72463 | opp_overlap 2588282 2588285, overlap 2588286 AGATTTTGAATATAA CAAGCCGCCC ATTAA GGGCGGTTTG TGGTTGAGAGTGAAT TERM 2572 2588306 - 2588282 - R 88 -11.4 -3.67052 | opp_overlap 2588282 2588286, overlap 2588285 AGATTTTGAATATAA CAAGCCGCCC ATTAA GGGCGGTTTG TGGTTGAGAGTGAAT TERM 2573 2588303 - 2588285 - R 71 -7.3 -3.9644 | opp_overlap 2588282 2588286, overlap 2588282 TTTTGAATATAACAA GCCGCCC ATTAA GGGCGGT TTGTGGTTGAGAGTG TERM 2574 2588286 - 2588302 + r 88 -10.8 -4.05714 | opp_overlap 2588285 2588282, overlap 2588282 TTTGAATATAACAAG CCGCCC ATTAA GGGCGG TTTGTGGTTGAGAGT Ssed_2140 2590211 - 2588337 - | hypothetical protein TERM 2575 2588537 - 2588556 + g 77 -2.8 -5.2189 | overlap 2588519 CGCGGAGCCACTGCT TTACTGAG GCTT CTCCGTGA TTTTTTGGTAATTGG TERM 2576 2589155 - 2589168 + g 76 -2.3 -5.22039 | opp_overlap 2589139, overlap 2589165 GGGTTGTCCAGCCTG CGCCA ACCC TGGAG TTTTTTCCGTTTACG TERM 2577 2589536 - 2589506 - G 78 -11.2 -3.27704 | ATGGCTGAAATCTAA GATCCATTCCGGGT TGT ACCCAGAACTGATC CATGCGTTCATAGTG TERM 2578 2590446 - 2590469 + G 73 -5.2 -4.55023 | TTTCTTGCTTCTCTG GAAGCCTTAG GGAT CAATGGCTTC TTTTATGGTATTACC TERM 2579 2590879 - 2590858 - g 100 -5.1 -5.53079 | opp_overlap 2590867 2590869 AAAACAGAGAAAAAA TAGACCGAC TACT GCAGGTCTA TGCAGAATTTTTTTC TERM 2580 2590867 - 2590886 + G 79 -2.1 -5.44119 | opp_overlap 2590858, overlap 2590869 AAAAAATAGACCGAC TACTGCA GGTCTA TGCAGAA TTTTTTTCGAGTAAA Ssed_2141 2590323 - 2591156 + | hypothetical protein Ssed_2142 2592002 - 2591241 - | hypothetical protein TERM 2581 2591927 - 2591913 - G 79 -2.1 -5.41143 | overlap 2591914 GATCCCGTAAAAAAA TTCAG TGATC CCGAA TTGAATCAGGTAGTC TERM 2582 2592107 - 2592135 + r 70 -8.3 -3.43492 | gap 1, opp_overlap 2592109 TATTAAGAATTTTAA GAGCCTG-ATAC ATATGA GTATACAGGCTC TTGTGCTGGATATGA Ssed_2143 2594090 - 2592192 - | hypothetical protein TERM 2583 2594472 - 2594458 - R 72 -10 -2.73468 | opp_overlap 2594447, overlap 2594446 2594448 TAAGACGCCTAATGA GTGAGC AAA GCTCAC CAGTTGGGCCCGATT Ssed_2144 2595198 - 2594437 - | hypothetical protein TERM 2584 2595287 - 2595335 + r 91 -13.3 -3.21705 | gap 1, opp_overlap 2595295 2595297, overlap 2595289 2595295 2595296 CCATGGCGATATCCA TT-GTCAAAGAGGGCTTGGGCG TTTTGT CGCCCAAGCCCGGTTTGGCTAA TTAACTTGCGTTATC TERM 2585 2595289 - 2595332 + r 100 -17.5 -2.79456 | opp_overlap 2595295 2595297, overlap 2595287 2595295 2595296 ATGGCGATATCCATT GTCAAAGAGGGCTTGGGCG TTTTGT CGCCCAAGCCCGGTTTGGC TAATTAACTTGCGTT TERM 2586 2595326 - 2595295 - R 88 -11.5 -3.57971 | opp_overlap 2595289 2595287 2595295 2595296, overlap 2595297 ATATCCATTGTCAAA GAGGGCTTGGGCG TTTTGT CGCCCAAGCCCGG TTTGGCTAATTAACT TERM 2587 2595295 - 2595326 + r 88 -11.5 -3.71794 | opp_overlap 2595295 2595297, overlap 2595289 2595287 2595296 ATATCCATTGTCAAA GAGGGCTTGGGCG TTTTGT CGCCCAAGCCCGG TTTGGCTAATTAACT TERM 2588 2595296 - 2595325 + r 95 -15 -2.82595 | opp_overlap 2595295 2595297, overlap 2595295 2595289 2595287 TATCCATTGTCAAAG AGGGCTTGGGCG TTTTGT CGCCCAAGCCCG GTTTGGCTAATTAAC TERM 2589 2595324 - 2595297 - R 100 -18.5 -3.36694 | opp_overlap 2595296 2595295 2595289 2595287, overlap 2595295 ATCCATTGTCAAAGA GGGCTTGGGCG TTTTGT CGCCCAAGCCC GGTTTGGCTAATTAA Ssed_2145 2597311 - 2595356 - | hypothetical protein TERM 2590 2595732 - 2595763 + g 88 -11.6 -3.89971 | gap 1, overlap 2595759 TCGCTGCTGTTTATC GGCCAACTGTGGCCA CCA TGGCC-CAGTGGGTC TTTACTCTCATTGTG TERM 2591 2596947 - 2596959 + g 71 -2.7 -4.98857 | overlap 2596939 2596938 AATAGCTGATGCATC TTGAT TGC ATCGA TTTTTATAGTTGCCT TERM 2592 2597403 - 2597422 + r 79 -8.6 -4.07568 | opp_overlap 2597403 TGCGATCCGCCAAAA CGCTACGA CTAG TCGTAGTG TTTTGGCGGGGAAAA TERM 2593 2597641 - 2597618 - R 90 -11 -4.15366 | opp_overlap 2597617 ATTGAAAGAAGGAAA CCGAGTGCCC GGAA GAACACTCGG CTAAGTTACTACTCG Ssed_2146 2598550 - 2597657 - | ABC-type Fe3+-hydroxamate transport system periplasmic component-like protein Ssed_2147 2598738 - 2599622 + | ABC transporter, ATP-binding protein Ssed_2148 2599619 - 2600602 + | putative ABC transporter, permease protein Ssed_2149 2600895 - 2601809 + | cytochrome c family protein Ssed_2150 2601821 - 2603830 + | outer membrane protein TERM 2594 2603996 - 2604021 + F 100 -16.3 -6.07969 | TTGCAGCCATCTTTA CCGGGAATAGA GGCA TCTATTCCCGG TTTTTTTTGCTTTTA TERM 2595 2604184 - 2604201 + G 71 -4 -4.73388 | ACCTTACAAGTTTTT GCAGCC CCCTTA GGCCGC TTTTTGATAGCAATT Ssed_2151 2604163 - 2604561 + | transporter TERM 2596 2604709 - 2604722 + F 73 -6.7 -4.17958 | opp_overlap 2604707 2604709 TATTATTGTTAAATA CTTGC GCTT GCAAG TTTGTTCAAAATATT Ssed_2152 2605004 - 2605909 + | hypothetical protein TERM 2597 2605959 - 2605922 - T 100 -14.9 -3.7791 | opp_overlap 2605922 TAATTACCGATTAAA GCAGCCTCCCAATTCAG CATT CTGAGCTGGGAGCCTGC TTTTTTAGGTTCTGG TERM 2598 2605922 - 2605959 + T 100 -14.9 -5.1925 | opp_overlap 2605922 TAATTACCGATTAAA GCAGCCTCCCAATTCAG CATT CTGAGCTGGGAGCCTGC TTTTTTAGGTTCTGG Ssed_2153 2607060 - 2606044 - | hypothetical protein Ssed_2154 2607671 - 2607087 - | Cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 2599 2607595 - 2607609 + g 76 -7.1 -4.41844 | ATCAGCACCTGACCA CGCTC CTCTT GAGCG TTTTCTACGGCTTTT Ssed_2155 2608444 - 2607668 - | cobalamin 5'-phosphate synthase Ssed_2156 2609805 - 2608441 - | hypothetical protein Ssed_2157 2611262 - 2609805 - | cobyric acid synthase TERM 2600 2611225 - 2611247 + g 76 -8.4 -4.053 | overlap 2611226 CTTTTACCTGCATCA CTGGTGGTGC CTT GCACCATCAA TTTATATCCGCTCAT TERM 2601 2611226 - 2611246 + g 78 -11.9 -3.02698 | overlap 2611225 TTTTACCTGCATCAC TGGTGGTGC CTT GCACCATCA ATTTATATCCGCTCA Ssed_2158 2612335 - 2611259 - | hypothetical protein Ssed_2159 2612977 - 2612336 - | hypothetical protein Ssed_2160 2613540 - 2612974 - | cobinamide kinase; cobinamide phosphate guanylyltransferase CobU Ssed_2161 2614436 - 2613537 - | periplasmic binding protein Ssed_2162 2614964 - 2614437 - | cobalbumin biosynthesis enzyme TERM 2602 2614834 - 2614846 + g 76 -9.1 -3.89346 | ATACGCTTAGCCATG GCACC TTC GGTGC TTTCTGCCGTCGCAA Ssed_2163 2615975 - 2614965 - | transport system permease protein Ssed_2164 2616774 - 2615962 - | ABC transporter related TERM 2603 2616792 - 2616814 + r 100 -13.4 -3.83409 | opp_overlap 2616790 CTAGGGTATCCAATG TTGCGCCGGC AAT GCCGACGCAA TTTGCTGCTATCTAA Ssed_2165 2618682 - 2616832 - | TonB-dependent vitamin B12 receptor TERM 2604 2619081 - 2619100 + r 87 -5 -5.4756 | opp_overlap 2619081 GTTTAAAATGAAAAA GACTGTTA CTTC TTACAGTC TTTTTTATTAAGGTT TERM 2605 2619100 - 2619081 - R 79 -5 -5.0925 | opp_overlap 2619081 GTTTAAAATGAAAAA GACTGTTA CTTC TTACAGTC TTTTTTATTAAGGTT TERM 2606 2619390 - 2619368 - R 100 -13.5 -5.24531 | opp_overlap 2619368 ACCCTTCATAAAAAA TGCCGCTCT GATGT AGAGCGGCA TTTTTGTATTGAGCC TERM 2607 2619368 - 2619390 + r 100 -14.2 -5.0916 | opp_overlap 2619368 ACCCTTCATAAAAAA TGCCGCTCTG ATG TAGAGCGGCA TTTTTGTATTGAGCC Ssed_2166 2622635 - 2619453 - | acriflavin resistance protein TERM 2608 2620541 - 2620557 + g 91 -6.5 -5.26875 | overlap 2620540 GCTCCTGCGATGCGG CGACGAG TTG CTCTTCG TTTTTTCCTTCGAGA TERM 2609 2622604 - 2622575 - G 71 -9.3 -3.45023 | gap 1 TGATGAGCATCAGAA GGTTCGC-CGCGAC ACT GTTGCGCGCAAACC AGGAGATGATGCCTC Ssed_2167 2623829 - 2622639 - | RND family efflux transporter MFP subunit TERM 2610 2624203 - 2624181 - R 90 -8.4 -5.00616 | GTTTTCTCTAAAAAA GAGGCTCCAA AAT CTGAAGCCCC TAAAACAGTGAATTA Ssed_2168 2625214 - 2624216 - | hypothetical protein TERM 2611 2625110 - 2625126 + g 78 -5.1 -4.86385 | AGCTAATGATAACTT CGCTGTT GGC AACACCG TTTCTTTTTCAGGAT Ssed_2169 2625656 - 2626030 + | hypothetical protein TERM 2612 2626072 - 2626047 - f 72 -10.5 -2.54841 | opp_overlap 2626043 2626047, overlap 2626046 2626044 GCTCAATAAAAGTAT TCAACCCTTCA AATA TGAGGGGTTGA TTGATTCTTGATGTC TERM 2613 2626047 - 2626072 + F 90 -12.7 -3.57213 | opp_overlap 2626047 2626046 2626044, overlap 2626043 GCTCAATAAAAGTAT TCAACCCTTCA AATA TGAGGGGTTGA TTGATTCTTGATGTC Ssed_2170 2626294 - 2626647 + | nitrogen regulatory protein PII Ssed_2171 2628031 - 2626778 - | DNA-directed DNA polymerase TERM 2614 2626923 - 2626940 + g 77 -6.9 -4.57569 | overlap 2626924 TTAAGCCTATCGTAC ACCCGCA TTAA TGCGGGG TTTTTAGGAGGCTCA TERM 2615 2626924 - 2626939 + g 75 -10.4 -3.3422 | overlap 2626923 TAAGCCTATCGTACA CCCGCA TTAA TGCGGG GTTTTTAGGAGGCTC Ssed_2172 2628592 - 2628167 - | SOS-response transcriptional repressor LexA -like protein Ssed_2173 2628767 - 2629687 + | putative manganese-dependent inorganic pyrophosphatase TERM 2616 2629757 - 2629721 - f 90 -13.2 -2.84325 | gap 1, opp_overlap 2629721, overlap 2629718 2629716 CCGTTCCAAATATCA GGCCGAAGCAAT-TTTC ATTA GAAATAGTGCTTCGGCC TTTTTGTATCTGTTG TERM 2617 2629721 - 2629757 + F 100 -13.2 -5.09685 | gap 1, opp_overlap 2629721 2629718 2629716 CCGTTCCAAATATCA GGCCGAAGCAAT-TTTC ATTA GAAATAGTGCTTCGGCC TTTTTGTATCTGTTG TERM 2618 2630083 - 2630065 - g 75 -6 -4.65458 | overlap 2630067 TAGAGAAACAATAAA TATCGCTT ATG AAGCGATC GATCGTCATCTCAAT TERM 2619 2630081 - 2630067 - g 73 -8.6 -3.91443 | overlap 2630065 GAGAAACAATAAATA TCGCTT ATG AAGCGA TCGATCGTCATCTCA Ssed_2174 2629931 - 2631697 + | acetyl-CoA synthetase Ssed_2175 2631694 - 2632689 + | pyruvate dehydrogenase (acetyl-transferring) Ssed_2176 2632686 - 2633669 + | pyruvate dehydrogenase complex, E1 beta2 component TERM 2620 2634082 - 2634098 + G 81 -7.9 -4.63486 | opp_overlap 2634076 AGCCATTAAGGGCAG TGGACCC AAG GGGGCCA TTTTATTGAGGGACT Ssed_2177 2633705 - 2634838 + | dehydrogenase catalytic domain-containing protein Ssed_2178 2634835 - 2635080 + | phosphopantetheine-binding protein Ssed_2179 2635321 - 2635761 + | universal stress protein TERM 2621 2635862 - 2635829 - T 72 -8.3 -3.48558 | opp_overlap 2635834, overlap 2635825 ATAAAGACTAATTAA GCATCGATGAC CTTTATCCTCTT GTCATCGATGC TGAAGAACACAAACG Ssed_2180 2638309 - 2635886 - | putative ATP-dependent protease La-relatedprotein TERM 2622 2636184 - 2636199 + g 93 -7.6 -5.26875 | opp_overlap 2636184 2636182 TTGATGGCACAAACA TCGAAG AAGC CTTCGA TTTTTTCATTGACGC Ssed_2181 2639213 - 2638620 - | hypothetical protein TERM 2623 2639810 - 2639834 + G 90 -14.3 -2.93747 | TTATGAAGGTATGGT GCGTTCAACCC AAG GGGATGAACGC TATGTAAAATTTCAT Ssed_2182 2639520 - 2640437 + | diguanylate cyclase with PAS/PAC sensor Ssed_2183 2640602 - 2641267 + | putative short-chain dehydrogenase TERM 2624 2641296 - 2641322 + T 78 -10.8 -2.95404 | opp_overlap 2641299, overlap 2641293 TCCGGGGGCTATAAA AAAGGCTGGCAC CTG GTGCCAGCCTCG TACTTACTTTTGATG TERM 2625 2641319 - 2641299 - T 100 -16.9 -5.24129 | opp_overlap 2641296 2641293 GGGGGCTATAAAAAA GGCTGGCAC CTG GTGCCAGCC TCGTACTTACTTTTG Ssed_2184 2643117 - 2641354 - | hypothetical protein TERM 2626 2645166 - 2645145 - R 90 -10.2 -4.43681 | TATCGAACAGGAAAA GCCAGTTG GAACGT CAACTGGC TAACAGAAGCGGTTA Ssed_2185 2646009 - 2645827 - | hypothetical protein TERM 2627 2646977 - 2646965 - g 74 -6.3 -4.39386 | opp_overlap 2646964 GTGAAAGCACCAAAA CAATC GAT GATTG GATTAGTTATGCAGA Ssed_2186 2646655 - 2647257 + | hydrolase TERM 2628 2647509 - 2647528 + T 100 -13.6 -5.69023 | overlap 2647525 ACTCACTTTTCTTAA GGCCTGCT TCTT AGCAGGCC TTTTTTTGCTGTTTT Ssed_2187 2647919 - 2647605 - | hypothetical protein TERM 2629 2648300 - 2648319 + r 77 -9.4 -3.54902 | opp_overlap 2648293 2648300 2648291 2648298, overlap 2648297 TGTAAACATTGAACA TTGAACAG TGCA CTGTTCAA TTGGTTCTTAGGTGG TERM 2630 2648319 - 2648300 - R 73 -9.4 -3.182 | opp_overlap 2648297 2648300, overlap 2648293 2648291 2648298 TGTAAACATTGAACA TTGAACAG TGCA CTGTTCAA TTGGTTCTTAGGTGG Ssed_2188 2648759 - 2648346 - | hypothetical protein Ssed_2189 2648934 - 2649269 + | HxlR family transcriptional regulator TERM 2631 2650225 - 2650207 - f 83 -8.9 -4.10657 | opp_overlap 2650201 TTATAGCCCGTAAAA TGTGGCA CATAT TGCCACA CCTCACTAGCTTAAA TERM 2632 2650593 - 2650610 + F 71 -9.9 -2.80511 | opp_overlap 2650593 2650592, overlap 2650593 2650588 2650596 CGGCAACGCGCAAAG CAACGGT GATG ACCGTTG TAGTTCGGTTGTAAC TERM 2633 2650610 - 2650593 - f 71 -9.9 -2.76261 | opp_overlap 2650588 2650593 2650593 2650596, overlap 2650592 CGGCAACGCGCAAAG CAACGGT GATG ACCGTTG TAGTTCGGTTGTAAC Ssed_2190 2650865 - 2651131 + | hypothetical protein Ssed_2191 2651277 - 2651534 + | hypothetical protein TERM 2634 2651775 - 2651790 + G 90 -6.1 -5.47218 | opp_overlap 2651775 AACCGCAAGATTTAA CCAGC CCAAGA GCTGG TTTTTTTGCATCGGA TERM 2635 2652837 - 2652823 - g 73 -4.9 -4.7373 | opp_overlap 2652824, overlap 2652824 TGAGCGGATTAAAAA CCCGC AAGCG GCGAG CGGTTACATGCTCAA TERM 2636 2653206 - 2653194 - g 83 -6.9 -4.91712 | CTGAACTGAGAAAAA GCCCC GTT AGGGC AAATGATTACATGAT Ssed_2192 2651696 - 2653519 + | hypothetical protein TERM 2637 2653867 - 2653884 + F 82 -8.5 -4.16016 | AATCAGTTTTAAGGC TAGGTCA CTGA TGACCTA TTTGTTGGGGGGTCA Ssed_2193 2654110 - 2654388 + | hypothetical protein Ssed_2194 2654370 - 2654732 + | hypothetical protein Ssed_2195 2654733 - 2655314 + | hypothetical protein TERM 2638 2655645 - 2655661 + G 73 -5.1 -4.59853 | GGCGTCCGATGGTAA TCGCGTC TTA GATGTGA TTTTTGAGGAATTAG Ssed_2196 2655292 - 2655993 + | hypothetical protein Ssed_2197 2656343 - 2657161 + | hypothetical protein Ssed_2198 2657172 - 2657477 + | hypothetical protein Ssed_2199 2657757 - 2658122 + | hypothetical protein Ssed_2200 2658122 - 2658913 + | hypothetical protein TERM 2639 2658960 - 2658974 + G 71 -6.4 -4.13995 | opp_overlap 2658960 TAATATGGGAAAGGA GGGAAG TTA CTTCTC TTTGGTTTCTGCAAG Ssed_2201 2658910 - 2660418 + | hypothetical protein TERM 2640 2660601 - 2660584 - gf 77 -6.3 -4.65916 | overlap 2660586 TTGATTTTAATAAAA TACTGTC GGGA GACAGCA ACATGCCAATATCAA Ssed_2202 2660418 - 2661041 + | hypothetical protein TERM 2641 2661339 - 2661328 - gf 72 -5.8 -4.34402 | opp_overlap 2661327 GGTCGGACACTAAAA CCTG AATA CAGG CATTTAATCGGTAAG Ssed_2203 2661016 - 2661372 + | hypothetical protein Ssed_2204 2661416 - 2661742 + | hypothetical protein Ssed_2205 2662296 - 2662955 + | hypothetical protein Ssed_2206 2663538 - 2663053 - | hypothetical protein TERM 2642 2664690 - 2664713 + r 73 -9.7 -3.14136 | CGATTTAACCTCAAT TGCCGATAA TGACAC TTATCGGCA TTAACTCATTACTCA Ssed_2207 2666088 - 2664796 - | phage integrase family protein TERM 2643 2665245 - 2665257 + g 71 -9.1 -3.59627 | opp_overlap 2665244 GAGCCTTCGATATAG CGACG CTA CGTCG TTTCCCCCCTTTGCT Ssed_2208 2666567 - 2666280 - | hypothetical protein TERM 2644 2666824 - 2666795 - g 83 -6.5 -4.98061 | overlap 2666821 2666822 ATATAGCAAAGAAAA GCCCCCTTTTTTC AGGT AAAAAAAAGGCGC CGGAAGAGAGCTCTG Ssed_2209 2666770 - 2668350 + | response regulator receiver modulated metal dependent phosphohydrolase Ssed_2210 2668890 - 2668465 - | hypothetical protein Ssed_2211 2669201 - 2670628 + | cytochrome c oxidase, cbb3-type, subunit I Ssed_2212 2670641 - 2671267 + | cytochrome c oxidase, cbb3-type, subunit II Ssed_2213 2671283 - 2671450 + | Cbb3-type cytochrome oxidase component TERM 2645 2671552 - 2671539 - g 73 -5.3 -4.57341 | overlap 2671526 AATTGTCTCTAAAAA CAACA CGGG TGTTG AAGAAGGCAAGTCGA Ssed_2214 2671450 - 2672418 + | cytochrome c oxidase, cbb3-type, subunit III TERM 2646 2672462 - 2672436 - f 70 -9.4 -2.59133 | opp_overlap 2672439, overlap 2672435 2672433 ACATATAAGCAACAT GGAGGCCTCGAT CTT ATCGAGGCCTTT TTTTTAGGGTGCTAA TERM 2647 2672439 - 2672459 + F 100 -15.5 -5.78622 | opp_overlap 2672436 2672435 2672433 TATAAGCAACATGGA GGCCTCGAT CTT ATCGAGGCC TTTTTTTTAGGGTGC Ssed_2215 2672529 - 2673008 + | hypothetical protein Ssed_2216 2673026 - 2675404 + | heavy metal translocating P-type ATPase Ssed_2217 2675401 - 2675586 + | cytochrome oxidase maturation protein, cbb3-type TERM 2648 2675727 - 2675708 - g 70 -2.1 -4.86731 | opp_overlap 2675708 2675709 2675711, overlap 2675709 CTCCGCTAAACAAAA TCAGTTG GCATTA CAACTGC GTTTTCTGTTTACCT Ssed_2218 2675583 - 2676275 + | hypothetical protein TERM 2649 2676266 - 2676281 + F 76 -9 -3.762 | CATTGCAATTGCTCA GCTGAG CTAG CTCAGC TTATTAAATTAGTTT TERM 2650 2676362 - 2676350 - g 77 -4.8 -4.97957 | overlap 2676337 CAGACAACAATAAAA GTCG TCGTT CGAC CGTTCCCGGATGCGC Ssed_2219 2676331 - 2677080 + | fumarate/nitrate reduction transcriptional regulator Ssed_2220 2677419 - 2678351 + | universal stress protein UspE TERM 2651 2678394 - 2678424 + F 82 -4 -5.4251 | gap 1, opp_overlap 2678394 TTTTAATATATACTA CGCGCCCAG-AAT TCAAGT GTTACTAGGCGCG TTTTTTATGTCTGAA Ssed_2221 2678431 - 2679381 + | PP-loop domain-containing protein TERM 2652 2679444 - 2679473 + T 100 -15.1 -3.76759 | opp_overlap 2679450, overlap 2679450 ATAAAGTTCAGATAT AAAAAAGCCCGGC TGAT GCCGGGCTTTTTA TTTAATGCAATTGGT TERM 2653 2679467 - 2679450 - T 100 -14.1 -5.4251 | opp_overlap 2679450 2679444 TTCAGATATAAAAAA GCCCGGC TGAT GCCGGGC TTTTTATTTAATGCA TERM 2654 2679450 - 2679467 + T 100 -14.1 -5.33405 | opp_overlap 2679450, overlap 2679444 TTCAGATATAAAAAA GCCCGGC TGAT GCCGGGC TTTTTATTTAATGCA Ssed_2222 2680120 - 2679494 - | hypothetical protein TERM 2655 2679702 - 2679684 - G 71 -6.6 -4.23999 | opp_overlap 2679684, overlap 2679685 TCAGAGCTAAAATAA CGCATGGG AAA CCCCTGCA TATCATTGAGCAACT Ssed_2223 2680925 - 2680098 - | Bax protein, putative TERM 2656 2680896 - 2680880 - G 70 -7.9 -3.83744 | opp_overlap 2680880 2680879 TGATCGAAATAAAGA CGAGGCT AAT AGCCACG GTTAATTTTCCAACT Ssed_2224 2681062 - 2681961 + | protein of unknown function UPF0052 and CofD TERM 2657 2681992 - 2682022 + T 89 -12.1 -3.44529 | gap 1, opp_overlap 2681998, overlap 2681998 GCCTCTTTACAGGAT CAAAAA-GGACAGC ATTA GCTGTCCTTTTTTG TTACTTAGTGTCTGA TERM 2658 2682015 - 2681998 - T 95 -11.3 -4.79223 | opp_overlap 2681998 2681992 TTACAGGATCAAAAA GGACAGC ATTA GCTGTCC TTTTTTGTTACTTAG TERM 2659 2681998 - 2682015 + T 100 -11.3 -5.5604 | opp_overlap 2681998, overlap 2681992 TTACAGGATCAAAAA GGACAGC ATTA GCTGTCC TTTTTTGTTACTTAG Ssed_2225 2683257 - 2682061 - | aromatic amino acid aminotransferase TERM 2660 2682866 - 2682890 + g 73 -7.2 -4.29176 | overlap 2682864 TTTTGATGATTTGCC CAAGTTGGGT TACTT ACCCAAATTG TTTTAGATTCGGTAT TERM 2661 2683488 - 2683534 + r 100 -20.5 -4.57569 | gap 1, opp_overlap 2683494 2683497, overlap 2683490 GTTTTGAGTATTTTA G-ATGAACAACAGAGCCCCAAC TTTC GTTGAGGCTCTGTTGTTCATTC TTTTTAAAAGAATGG TERM 2662 2683490 - 2683531 + r 100 -23.3 -4.40561 | opp_overlap 2683494 2683497, overlap 2683488 TTTGAGTATTTTAGA TGAACAACAGAGCCCCAAC TTTC GTTGAGGCTCTGTTGTTCA TTCTTTTTAAAAGAA TERM 2663 2683527 - 2683494 - R 100 -20.5 -3.272 | opp_overlap 2683490 2683488, overlap 2683497 AGTATTTTAGATGAA CAACAGAGCCCCAAC TTTC GTTGAGGCTCTGTTG TTCATTCTTTTTAAA TERM 2664 2683524 - 2683497 - R 100 -16.4 -3.77588 | opp_overlap 2683490 2683488, overlap 2683494 ATTTTAGATGAACAA CAGAGCCCCAAC TTTC GTTGAGGCTCTG TTGTTCATTCTTTTT TERM 2665 2683662 - 2683643 - R 89 -5.7 -5.4251 | opp_overlap 2683643 TTCAGATACAAAAAA GCCCCAA ATATCG TTGAGGC TTCAATGCTCATTCT TERM 2666 2683729 - 2683749 + r 73 -10.5 -2.89742 | overlap 2683732 GGCACGCTTATTCAG CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 2667 2683732 - 2683746 + r 72 -8.6 -3.5947 | overlap 2683729 ACGCTTATTCAGCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 2668 2684701 - 2684682 - R 100 -10 -5.4251 | opp_overlap 2684682 TCCAGATACAAAAAA GCCCCAAC TATT GTTGAGGC TTGAATGCTCATTCT TERM 2669 2684769 - 2684789 + r 73 -10.5 -2.89742 | overlap 2684772 GGCACGCTTATTCAG CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 2670 2684772 - 2684786 + r 72 -8.6 -3.5947 | overlap 2684769 ACGCTTATTCAGCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 2671 2685351 - 2685334 - R 100 -9.9 -5.79595 | opp_overlap 2685334 CCTTAAAACAAAAAA GCCTCAA ATCA TTGAGGC TTCTTCACTAGGTTT TERM 2672 2685334 - 2685351 + r 79 -9.9 -3.69684 | opp_overlap 2685334 CCTTAAAACAAAAAA GCCTCAA ATCA TTGAGGC TTCTTCACTAGGTTT Ssed_2226 2686823 - 2685384 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2673 2686775 - 2686754 - G 76 -10.9 -3.24425 | opp_overlap 2686753, overlap 2686746 2686759 GATATAATTTACCAA GCAAAGGCT GCAT AGCCTCTGC CATTTCGAAACGTTC TERM 2674 2686912 - 2686890 - H 76 -2 -5.42605 | overlap 2686892 GTAACAAAAAGAAAA GACCAATACT CTA ATTATTGGTA GGGAAAAAATCCCTT Ssed_2227 2687047 - 2687877 + | hypothetical protein TERM 2675 2688879 - 2688853 - g 76 -11 -3.26471 | opp_overlap 2688860, overlap 2688860 CCACGCTTATACGAA TGATCAACGTCT TTC AGACGTTTATCA CACCGACTTACGTCG TERM 2676 2688860 - 2688872 + G 70 -7.7 -3.85817 | opp_overlap 2688853 2688860 TATACGAATGATCAA CGTCT TTC AGACG TTTATCACACCGACT TERM 2677 2689104 - 2689094 - g 80 -6.8 -4.78149 | GCGATAATCGAAAAA GCTG CTT CAGC TGCGCCAATGAGCGA Ssed_2228 2688299 - 2689309 + | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) TERM 2678 2689333 - 2689351 + T 100 -10.3 -5.46276 | opp_overlap 2689333 TCATAGAGTTTAAAA GCCAACC ACTCA GGTTGGC TTTTTTGTATCTGTT TERM 2679 2689351 - 2689333 - T 89 -10.3 -4.18401 | opp_overlap 2689333 TCATAGAGTTTAAAA GCCAACC ACTCA GGTTGGC TTTTTTGTATCTGTT Ssed_2229 2690848 - 2689445 - | GGDEF domain-containing protein TERM 2680 2691400 - 2691384 - g 83 -4.5 -5.33785 | overlap 2691386 AAGGAGTATAAAAAA TCCATAT TAG ATATGAA ACAGGCCGACTCCTT Ssed_2230 2691243 - 2691713 + | bacterioferritin Ssed_2231 2691715 - 2692197 + | bacterioferritin Ssed_2232 2692717 - 2692328 - | hypothetical protein TERM 2681 2692552 - 2692568 + g 79 -2.1 -5.42862 | overlap 2692553 CTGTTCCGGAAATGG CGCCACC CTG GGTAGCC TTTTTTTGAGCCTGT Ssed_2233 2693247 - 2692972 - | hypothetical protein TERM 2682 2694026 - 2694039 + G 70 -2.3 -4.84918 | TGGCATTGATGAGCA TGGGG CATT CACCA TTTTATCTTTATGAA Ssed_2234 2693425 - 2694558 + | spermidine/putrescine-binding periplasmic protein-like protein Ssed_2235 2695917 - 2694574 - | FAD dependent oxidoreductase TERM 2683 2694700 - 2694675 - G 83 -12.7 -2.94218 | gap 1, opp_overlap 2694671 AGGGGTTAGTATATA GGGGGA-GAGAT GGT ATCTCCTCCCCC GCAATAGATTGAGCC Ssed_2236 2696484 - 2695933 - | GCN5-related N-acetyltransferase TERM 2684 2696576 - 2696548 - H 79 -8.4 -4.13728 | gap 1 TATATAGCGGCAAAA GTTGAGTTTATGG TTAG CCATAAACT-AAC AAGACGAATTTTGTG TERM 2685 2697774 - 2697755 - g 85 -5.8 -5.05782 | AGTCATGTTAAAAAA TGTACTCA ACGC TAAGTACA ATGCCGTGATGAAAC Ssed_2237 2696691 - 2698388 + | MutT/NUDIX family protein TERM 2686 2698454 - 2698481 + F 95 -11.4 -4.96388 | GAGTAACACCTTCGG GCCCATTAATCT GATT GGATTGATGGGC TTTTATTTAATAATT TERM 2687 2698882 - 2698894 + G 75 -3.3 -5.07567 | opp_overlap 2698882 TCTTTATCTGGAAAA GCTGT TTT ACTGC TTTTTTACGCTATCA Ssed_2238 2698600 - 2699658 + | hypothetical protein TERM 2688 2699690 - 2699718 + T 93 -12.5 -4.0342 | opp_overlap 2699694, overlap 2699700 AGTGACTTAAGCTTA GATACCAGGCGAA CGA TATGCCTGGTATC TTGTTCTTAATTACC Ssed_2239 2700424 - 2699729 - | short chain dehydrogenase Ssed_2240 2700877 - 2700473 - | putative orphan protein TERM 2689 2700897 - 2700885 - H 71 -6.3 -4.15854 | opp_overlap 2700884 AAATCCATTCGAAAA GTCTT CGT AAGAC ACTATATTTTGAAGC TERM 2690 2701165 - 2701141 - H 72 -9.3 -3.43564 | opp_overlap 2701157 CAATGCAACGCAGAA GTTGGAAGTCT GAG AGTCTCCCAAC GGGCGGGTTTCAAAG Ssed_2241 2701332 - 2702381 + | hypothetical protein TERM 2691 2702593 - 2702581 - f 80 -7.7 -4.39571 | CGGATAAACGTAAAA TGGTC AGT GACCA AAAGCGTCAGGTGAC TERM 2692 2702610 - 2702597 - f 77 -8.1 -4.2828 | GGTCAGTGACCAAAA GCGTC AGGT GACGC AATATTACGAAATCA Ssed_2242 2702898 - 2703872 + | ABC-type sugar transport system, ATPase component Ssed_2243 2704488 - 2703964 - | hypothetical protein TERM 2693 2704796 - 2704780 - H 73 -9.5 -3.18634 | opp_overlap 2704780 2704783, overlap 2704778 2704783 AAATAACACTTAATA GAATGGT GTA ACCATTC TTTGCGTCTTTAAAT TERM 2694 2704780 - 2704796 + H 83 -9.5 -3.81539 | opp_overlap 2704778 2704780 2704783, overlap 2704783 AAATAACACTTAATA GAATGGT GTA ACCATTC TTTGCGTCTTTAAAT TERM 2695 2705134 - 2705099 - H 95 -15 -2.89191 | opp_overlap 2705094 2705130 2705132 2705132 TTATACGTTTAGACA TTCTACCAGTGATAAT GACG ATTATCACTGGTAGAG GTAGCCGCTTATCTC TERM 2696 2705855 - 2705831 - g 77 -10.1 -3.58522 | ATGATGAGCTGGAAA TGCTGATAGAT GTG ATCAATCAGCA GCCGCAACCAATGAC Ssed_2244 2705314 - 2706456 + | phage integrase family protein Ssed_2245 2708325 - 2706535 - | amidohydrolase 3 TERM 2697 2707862 - 2707846 - G 73 -9.5 -3.39936 | opp_overlap 2707846, overlap 2707839 2707838 AGTGAAATGTGATAA TGCATCA ATC TGATGCA TTTTCTCGCCATTAT TERM 2698 2707846 - 2707862 + g 85 -9.5 -4.40572 | opp_overlap 2707846 2707839 2707838 AGTGAAATGTGATAA TGCATCA ATC TGATGCA TTTTCTCGCCATTAT TERM 2699 2708292 - 2708281 - G 73 -3.6 -4.84359 | GCACGCTGACAAAAA GGCA ATAA CGCC GATATTAATTAAAAT Ssed_2246 2709518 - 2708472 - | aminoglycoside phosphotransferase Ssed_2247 2710786 - 2709554 - | putative aminotransferase TERM 2700 2710826 - 2710805 - R 72 -8.7 -3.60098 | opp_overlap 2710808 2710822, overlap 2710808 AGTTCTCACTTGAAA TGAGGGAGG CTGC CCTCCCTTA ACTGCTAAGGTCGTT TERM 2701 2710823 - 2710808 - R 75 -10.4 -2.92613 | opp_overlap 2710808 2710822, overlap 2710805 TCTCACTTGAAATGA GGGAGG CTGC CCTCCC TTAACTGCTAAGGTC TERM 2702 2710808 - 2710823 + r 75 -10.4 -3.09834 | opp_overlap 2710808 2710805, overlap 2710822 TCTCACTTGAAATGA GGGAGG CTGC CCTCCC TTAACTGCTAAGGTC Ssed_2248 2713177 - 2710844 - | TonB-dependent receptor TERM 2703 2713910 - 2713924 + G 73 -5.6 -4.57073 | ATTCCGGACTTCCCG GACCAG GCA CAGGTC TTTTTCCACGCCGTG Ssed_2249 2713427 - 2714071 + | TetR family transcriptional regulator Ssed_2250 2714929 - 2714213 - | pseudouridine synthase TERM 2704 2714340 - 2714356 + g 80 -6.5 -4.68545 | opp_overlap 2714340 2714342, overlap 2714343 GTGGCATAGAGATCA CAGCCCA AAA TGGGGTG TTTTATCTGTTGACT TERM 2705 2715081 - 2715069 - H 72 -4.7 -4.7889 | ACAAATAGTTAAAAA GGGCG TAT CGCAC ACAAATGGTTAGTAA Ssed_2251 2715165 - 2715548 + | hypothetical protein TERM 2706 2715572 - 2715600 + T 95 -14.7 -2.88023 | opp_overlap 2715577, overlap 2715577 ATCACAACAAATTTC AAAAACGCAGCCA AAT TGGCTGCGTTTTG CTTTAATAATCATAG TERM 2707 2715595 - 2715577 - T 100 -14.6 -4.7339 | opp_overlap 2715572 2715577 AACAAATTTCAAAAA CGCAGCCA AAT TGGCTGCG TTTTGCTTTAATAAT TERM 2708 2715577 - 2715595 + T 100 -14.6 -4.59376 | opp_overlap 2715577, overlap 2715572 AACAAATTTCAAAAA CGCAGCCA AAT TGGCTGCG TTTTGCTTTAATAAT Ssed_2252 2716023 - 2715661 - | globin TERM 2709 2716264 - 2716275 + r 76 -4.4 -5.02201 | AATAACTGGTAAGCC CCTT CGTT AAGG TTTTTCTGATATTTT Ssed_2253 2717502 - 2716270 - | patatin TERM 2710 2717182 - 2717164 - G 71 -4.6 -4.59773 | TGTTACGGCTAAAAA TTCAGG TCGTGAT CCTGAA TCACTCCAAGCCTTG Ssed_2254 2718274 - 2719542 + | sensory box protein Ssed_2255 2722886 - 2719824 - | UvrD/REP helicase TERM 2711 2723358 - 2723375 + r 70 -9.1 -3.26444 | overlap 2723356 GTCGTCTTGTCGTCA CTCCGGT GAAT GCCGGAG TCTATTCTTAAGGGA Ssed_2256 2724185 - 2723406 - | negative regulator of beta-lactamase expression-like protein Ssed_2257 2725734 - 2724481 - | metal dependent phosphohydrolase TERM 2712 2724536 - 2724518 - G 81 -9.6 -3.98658 | overlap 2724516 2724529 ACCTGATTAAAAACA TCGACCCA ATA TGGGTCAA ACTGCGTCCCAGAGA TERM 2713 2725150 - 2725161 + g 70 -2.2 -4.87133 | AGGCTCTCTGGGACC GTCG CTGC TGAC TTTTGTTTCCGGCGT TERM 2714 2725979 - 2725996 + r 80 -11.3 -2.79239 | overlap 2725976 2725976 GGCCTTTATTAGTCA TTCCGGC GAAG GCCGGAA TCCATTTTCGTATAA TERM 2715 2726257 - 2726272 + r 74 -4.7 -5.00616 | TCTTTGTAGGAGCGT GCTTC AGCCGC GAAGC TTTTTTCAAAGGAGA Ssed_2258 2727324 - 2726434 - | transcriptional regulator Ssed_2259 2727459 - 2728715 + | adenylosuccinate synthase TERM 2716 2728840 - 2728828 - T 79 -3.4 -5.50499 | overlap 2728834 CTACACTCAAAAAAA TCAG AATAA CTGA TGCAGGTAATAGTAA TERM 2717 2728894 - 2728914 + T 100 -11.2 -5.78622 | opp_overlap 2728894 TCTGTTGACTTAAAA TGGAACCC ATACA GGGTTCCA TTTTTTTTGCCGTCA TERM 2718 2728914 - 2728894 - T 93 -11.2 -4.18018 | opp_overlap 2728894 TCTGTTGACTTAAAA TGGAACCC ATACA GGGTTCCA TTTTTTTTGCCGTCA TERM 2719 2729537 - 2729508 - T 91 -10.1 -4.52897 | opp_overlap 2729508 2729507 ACAACGAATAATAAA GCCAGAATGACAG ATAG CTCTCATTCTGAC CTTTCTCACACATCA Ssed_2260 2730622 - 2729564 - | iron-regulated membrane protein-like protein Ssed_2261 2731877 - 2732692 + | sulfurtransferase Ssed_2262 2732878 - 2734032 + | glucose dehydrogenase Ssed_2263 2735948 - 2734272 - | AMP-dependent synthetase and ligase TERM 2720 2735036 - 2735024 - G 83 -6.3 -5.00138 | opp_overlap 2735023 2735024 2735029 TATTTAAACCAAAAA CCATT GTG AATGG ATATTTACTTAAATC TERM 2721 2735697 - 2735711 + g 100 -7.1 -5.54079 | opp_overlap 2735697 ATTAGGCATCATCAA GGCGA TTCGT TCGCC TTTTTTCATTTTTAG TERM 2722 2736664 - 2736648 - R 83 -9.5 -3.93398 | AGCGATAGATAACAA TGAAGGT ATA ACCTTCA CACAAAATGCCCTTT Ssed_2264 2737786 - 2736662 - | HNH nuclease Ssed_2265 2738469 - 2737783 - | methyltransferase type 12 Ssed_2266 2740591 - 2738810 - | hypothetical protein TERM 2723 2740055 - 2740037 - G 73 -8.2 -3.96327 | opp_overlap 2740037 2740039 ATTTTTCATCATAAA CATGGATA CCT TACCCATG TCTGTCAGCTCAAGA Ssed_2267 2741033 - 2740758 - | hypothetical protein Ssed_2268 2742089 - 2741100 - | ADP-ribosylation/crystallin J1 TERM 2724 2741898 - 2741884 - G 71 -5 -4.64676 | overlap 2741887 CCAGTGTGAATAAAA CTATCT GCG AGACAG AGCATCATGGCAGTA Ssed_2269 2742775 - 2742314 - | hypothetical protein TERM 2725 2742353 - 2742370 + g 79 -11.3 -3.49482 | opp_overlap 2742336 2742351, overlap 2742351 TGCAGTTTCAAACTC GCCGATG AGGG CATCGGC TCTTTCCTGATATAA Ssed_2270 2744129 - 2742765 - | hypothetical protein Ssed_2271 2744553 - 2744155 - | hypothetical protein TERM 2726 2744250 - 2744240 - G 83 -8.2 -4.63527 | CTACCATCGCAAAAA CGGC TTT GCCG AACAATCATAGTGAG Ssed_2272 2745567 - 2744788 - | hypothetical protein Ssed_2273 2749302 - 2745709 - | putative pyruvate oxidoreductase TERM 2727 2747116 - 2747139 + g 74 -6.7 -4.31835 | gap 1 ACTCGACGGGAATGT CGTTGGC-GC TCCCT GCAGCCGACG TTTGTTATAAAACTT TERM 2728 2747863 - 2747898 + g 73 -7.5 -4.18934 | GCGAATAGGCTCGGG GCCGAAACGCAGATG AGAAAC CGTCTGTGATCCGGC TTTCTTGGAGTCATA Ssed_2274 2750972 - 2749344 - | putative glutamate synthase (NADPH) small subunit TERM 2729 2749527 - 2749548 + g 71 -7.1 -4.0371 | opp_overlap 2749526 GCAGCTATAACAACG GCTGGCCTC GAAC GTGGCCTGC TTTGTATCGAGACTG Ssed_2275 2752308 - 2751280 - | hypothetical protein Ssed_2276 2752889 - 2753632 + | hypothetical protein TERM 2730 2753820 - 2753810 - g 71 -6.8 -4.14739 | TTATGGAGCCTAAAA CCGT GTT ACGG GAATACGATAATACC Ssed_2277 2753629 - 2755548 + | Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF TERM 2731 2755633 - 2755652 + T 77 -10 -3.28712 | overlap 2755627 AAGGAAATTTGTGGA CTGGCACA TCCT TGTGCCGG TTCTGCAGGGAGCGC Ssed_2278 2756743 - 2755703 - | porin TERM 2732 2756785 - 2756818 + r 91 -13.1 -2.96899 | opp_overlap 2756780 TATTGAGTAACACTT GGGTACCCGACTAAG ATTC CTAGGCCGGGTACCC TCTGATTAGTTAGGC Ssed_2279 2758170 - 2756824 - | FMN-binding domain-containing protein TERM 2733 2757501 - 2757511 + g 73 -2.4 -5.07486 | overlap 2757495 AGGCTGACTGCACCC AGGC TGT GCCC TTTTTCTTGCCCATA TERM 2734 2757999 - 2758019 + g 78 -9.1 -4.10795 | TGATCTTGCCCTCTT TCACGTTAA CGG TTAGCGTGA TTTGGCTTTTTTTAC Ssed_2280 2758517 - 2759635 + | ApbE family lipoprotein TERM 2735 2759959 - 2759947 - f 76 -3.4 -5.19998 | overlap 2759953 ATAATTAAAACAAAA TGAC AATAG GTCA CCGAACTACGCTTTT Ssed_2281 2760044 - 2761720 + | histidine kinase Ssed_2282 2761713 - 2762312 + | two component LuxR family transcriptional regulator Ssed_2283 2764422 - 2762917 - | outer membrane efflux protein Ssed_2284 2767589 - 2764422 - | acriflavin resistance protein TERM 2736 2764730 - 2764696 - G 90 -12.8 -3.71265 | opp_overlap 2764694 2764687 2764685, overlap 2764717 AAGATAGGACGGAAA CGCATATTGGCGGCTT CCA AAGCCGCCTCTAAGCG ACTCTTGCCCTGTTT TERM 2737 2766117 - 2766105 - G 75 -10.5 -3.36273 | CGGCCTTAACAGTAA GGCGC ACA GCGCC GGCGACAGCGTCAAC TERM 2738 2766626 - 2766638 + g 73 -3.3 -4.93296 | overlap 2766626 AGACCTGCCACTCCA TCCCC TGT GGGAA TTTTTCTCCTAATGC Ssed_2285 2768875 - 2767589 - | RND family efflux transporter MFP subunit Ssed_2286 2769984 - 2769241 - | DTW domain-containing protein TERM 2739 2770021 - 2770010 - H 70 -3 -5.03314 | GTTACCGTTAAAAAA TTTG ATAG CAAA ATATTACCCAATATC Ssed_2287 2770648 - 2771874 + | multidrug resistance protein D TERM 2740 2772319 - 2772343 + T 76 -10.7 -2.72511 | opp_overlap 2772320, overlap 2772318 AATTGGGCAAAGAAA AGCCAGTTGGG AGT TCCAACTGGCA CTTTAAAACCGTCAA TERM 2741 2772342 - 2772320 - T 100 -13.5 -4.87133 | opp_overlap 2772319 2772318 ATTGGGCAAAGAAAA GCCAGTTGG GAGTT CCAACTGGC ACTTTAAAACCGTCA Ssed_2288 2773704 - 2772391 - | phosphatidylserine synthase TERM 2742 2773068 - 2773084 + g 77 -6.5 -4.59773 | opp_overlap 2773067 2773068, overlap 2773069 TCGTAAACTCATAAT GCGCCTT ACT AAGGCGG TTTTTCAGGCTACGA TERM 2743 2773069 - 2773083 + g 73 -10 -3.35542 | opp_overlap 2773068 2773067, overlap 2773068 CGTAAACTCATAATG CGCCTT ACT AAGGCG GTTTTTCAGGCTACG Ssed_2289 2774048 - 2773716 - | hypothetical protein TERM 2744 2774098 - 2774110 + H 70 -3.4 -4.87273 | TTACCGATTTAAGGG CCTT TGAGC AAGG TTTTTCTGCAATATT Ssed_2290 2774408 - 2774581 + | hypothetical protein Ssed_2291 2774783 - 2776240 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 2745 2776325 - 2776347 + T 100 -13.6 -4.57341 | opp_overlap 2776325 ACGGCCAACAAAAAA GGGAATACTT CGG AAGTATTCCC TTTTTAAAACAACTT TERM 2746 2776347 - 2776325 - T 100 -13.6 -5.45652 | opp_overlap 2776325 ACGGCCAACAAAAAA GGGAATACTT CGG AAGTATTCCC TTTTTAAAACAACTT Ssed_2292 2778181 - 2776424 - | acyl-CoA dehydrogenase domain-containing protein TERM 2747 2778362 - 2778341 - R 80 -8.1 -4.38141 | opp_overlap 2778352, overlap 2778338 2778352 CTGGATAGAAAATAA CAGCAAAAA AAGG TTTCTGCTG AGACAGAAACCTCTT TERM 2748 2778373 - 2778352 - R 100 -9.5 -5.6473 | opp_overlap 2778352, overlap 2778341 2778338 ATAACAGCAAAAAAA GGTTTCTGC TGAG ACAGAAACC TCTTAGGGTTTTAGA Ssed_2293 2778963 - 2778421 - | hypothetical protein TERM 2749 2778760 - 2778774 + g 74 -4.2 -4.98531 | overlap 2778768 TAATCCCTTCTCAGA CGCTTC TTC GAAACG TTTTTCGTTTAACGC Ssed_2294 2779778 - 2779074 - | orotidine-5'-phosphate decarboxylase Ssed_2295 2781043 - 2779883 - | hypothetical protein Ssed_2296 2781335 - 2781045 - | hypothetical protein TERM 2750 2781316 - 2781300 - G 83 -4.4 -5.47159 | TGCAAGAAAGAAAAA CAGTGC AACTA ACACTG TGATGATAAATGACT TERM 2751 2781425 - 2781440 + r 86 -10.4 -4.09243 | opp_overlap 2781414 2781425, overlap 2781414 TATAGGCATAAAAAA GCCTCC ATTC GGAGGC TTTTAAAACAATGTC TERM 2752 2781440 - 2781425 - R 100 -10.4 -5.29782 | opp_overlap 2781414 2781425, overlap 2781414 TATAGGCATAAAAAA GCCTCC ATTC GGAGGC TTTTAAAACAATGTC Ssed_2297 2781745 - 2781458 - | integration host factor, beta subunit TERM 2753 2781708 - 2781718 + g 80 -6.8 -4.68424 | overlap 2781705 GACATCTGCGACTGC CTCG TGG CGAG TTTTTCGATCAGTTC TERM 2754 2781802 - 2781787 - R 75 -10.4 -3.10354 | opp_overlap 2781799, overlap 2781799 CACAGTCACCTAACA GGGGTG CAAG CACCCC AGAACTTCAGGCGAT Ssed_2298 2783484 - 2781817 - | 30S ribosomal protein S1 Ssed_2299 2784279 - 2783587 - | cytidylate kinase TERM 2755 2784605 - 2784589 - R 73 -8.1 -3.794 | CGCTAATGCAGCAAA CTGATTA AAG TAATCAG GGAAGGTTTTAGATG Ssed_2300 2785848 - 2784568 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2756 2786023 - 2786043 + H 81 -11.3 -3.03034 | opp_overlap 2786022 2786025, overlap 2786020 2786025 CGCGTTAGATTCAAG TAGTAAGTG CAA CACTTACTA TGCTTTCTGAGGTTT TERM 2757 2786025 - 2786041 + H 72 -9.5 -3.06265 | opp_overlap 2786025 2786022, overlap 2786023 2786020 CGTTAGATTCAAGTA GTAAGTG CAA CACTTAC TATGCTTTCTGAGGT TERM 2758 2786041 - 2786025 - H 71 -9.5 -2.77182 | opp_overlap 2786023 2786020 2786025, overlap 2786022 CGTTAGATTCAAGTA GTAAGTG CAA CACTTAC TATGCTTTCTGAGGT TERM 2759 2786271 - 2786260 - H 73 -5.8 -4.56093 | AAGTCAATTAGAAAA GGCA GACT TGCC GACAAAAATATAAAG TERM 2760 2787113 - 2787125 + G 78 -5.5 -4.91977 | CAAAGATGCATCATC GGCTA ATG TGGCC TTTTCTGTTTTACTC Ssed_2301 2786298 - 2787503 + | aromatic amino acid aminotransferase TERM 2761 2787513 - 2787544 + T 83 -11 -3.69354 | opp_overlap 2787512 2787509, overlap 2787501 2787500 2787516 ATTTAAATAAGGTAT TTAGTTCCTAGGAT CTAG ATCCTAGGAACTGC TTTCAACTTCTAGCC TERM 2762 2787516 - 2787541 + T 100 -14.9 -2.95126 | opp_overlap 2787512 2787509, overlap 2787513 TAAATAAGGTATTTA GTTCCTAGGAT CTAG ATCCTAGGAAC TGCTTTCAACTTCTA Ssed_2302 2788648 - 2787554 - | phosphoserine aminotransferase TERM 2763 2788573 - 2788585 + g 78 -7.7 -4.3255 | CGTTCCAGTCGAGCA GCTCA CTC TGAGC TTTCTTCATTACGGC TERM 2764 2788774 - 2788795 + r 100 -17.3 -3.2819 | opp_overlap 2788774 AAGAATAAAACAAAA CGGGCGTCC AAAT GGACGCCCG TTAATCATATTCGCT TERM 2765 2788795 - 2788774 - R 100 -17.3 -5.33124 | opp_overlap 2788774 AAGAATAAAACAAAA CGGGCGTCC AAAT GGACGCCCG TTAATCATATTCGCT Ssed_2303 2791538 - 2788824 - | DNA topoisomerase (ATP-hydrolyzing) Ssed_2304 2791824 - 2792549 + | 3-demethylubiquinone-9 3-methyltransferase Ssed_2305 2792550 - 2793254 + | HAD family hydrolase TERM 2766 2793292 - 2793320 + F 84 -8.2 -4.81551 | opp_overlap 2793290 2793292 CTATTCACTCAAAGA TCCAAAAGATCG CCAGT CGGTCCTTTGGA TTTTTGATCTGGATC TERM 2767 2793519 - 2793506 - f 79 -3.1 -5.46129 | TAAGAAATTAAAAAA CACCA TATA TAGTG TGTTAGTGACAATCA TERM 2768 2795365 - 2795349 - g 76 -8.7 -4.11751 | opp_overlap 2795349 2795348 ATGAATCTGGCAAAA GAGCAAG GTG CTTGCCC CTCTTTCCATGAGAC Ssed_2306 2793669 - 2795957 + | ribonucleotide-diphosphate reductase subunit alpha TERM 2769 2796008 - 2795979 - f 80 -6.5 -4.72272 | overlap 2795980 CGTCGCCAGGAAAAA TGAAGTGAACC TATTGTCC GGTTCACTTCG CATAATGATACACTC TERM 2770 2796007 - 2795980 - f 77 -10 -3.43042 | overlap 2795979 GTCGCCAGGAAAAAT GAAGTGAACC TATTGTCC GGTTCACTTC GCATAATGATACACT Ssed_2307 2796104 - 2797234 + | ribonucleotide-diphosphate reductase subunit beta TERM 2771 2797304 - 2797281 - g 72 -11.1 -2.74514 | opp_overlap 2797275 2797279 CTAAATGGTCAACCA GTGTTGCTG TTTAAT CAGCAACAC ATCAGCCTGTTAGAT Ssed_2308 2797218 - 2797568 + | ferredoxin TERM 2772 2797591 - 2797602 + F 89 -5.8 -5.36441 | CATCTTTATCCCCCT GCCA GCCA TGGC TTTTTTATCTACCCG Ssed_2309 2797887 - 2799530 + | methyl-accepting chemotaxis protein-like protein TERM 2773 2799600 - 2799564 - T 100 -17.4 -6.01187 | opp_overlap 2799564 AATTAAATAAAAAAA GCCTGAATGTCTCCCC GTTAA GAGGAGTCATTCAGGC TTTTAGCGTCAAAAA TERM 2774 2799564 - 2799600 + T 100 -15.2 -4.13767 | opp_overlap 2799564 AATTAAATAAAAAAA GCCTGAATGTCTCCCC GTTAA GAGGAGTCATTCAGGC TTTTAGCGTCAAAAA Ssed_2310 2801643 - 2799628 - | NADH:flavin oxidoreductase/NADH oxidase TERM 2775 2801017 - 2801028 + g 85 -5.8 -5.03314 | opp_overlap 2801017 GAAAATGATAATGAA GTCG TCGC CGAC TTTTTTGCGAATCGA Ssed_2311 2801807 - 2803645 + | acid phosphatase TERM 2776 2803691 - 2803668 - f 100 -11 -5.30616 | opp_overlap 2803668 CCAGTTAAACAAAAA CCGGTATGAG TCCT CTCCTACCGG TTTTTTTGTGCCTCA TERM 2777 2803668 - 2803691 + F 100 -11 -5.64274 | opp_overlap 2803668 CCAGTTAAACAAAAA CCGGTATGAG TCCT CTCCTACCGG TTTTTTTGTGCCTCA TERM 2778 2803895 - 2803869 - g 93 -8.7 -5.09895 | gap 1, opp_overlap 2803868 TAGGCATGCAAAAAA CGGCGCAAGGGT TCGC ACCCGT-CGCCG GATTTCTCACTAACT Ssed_2312 2803811 - 2804824 + | cytoplasmic asparaginase I TERM 2779 2804817 - 2804802 - T 72 -9 -3.39521 | opp_overlap 2804799 TGCAGCAAAATTTAA TCGGTG AACT CACCGA AGATTAATTTCCCAT TERM 2780 2804900 - 2804882 - T 73 -5.4 -4.55798 | TATGGGAAATCAAAA TAATATGC TTC ACATATTA GCAAGCCGTAAATAC TERM 2781 2804963 - 2804923 - T 100 -15.7 -3.99957 | opp_overlap 2804929, overlap 2804929 GTAAATACTGACAAA TAAAAAGGCTGGTAACC TTAGTTT GGTTACCAGCCTTCTCA ATATACATGCGGATT TERM 2782 2804929 - 2804957 + T 100 -14.7 -3.39803 | opp_overlap 2804923 2804929 ACTGACAAATAAAAA GGCTGGTAACC TTAGTTT GGTTACCAGCC TTCTCAATATACATG TERM 2783 2804957 - 2804929 - T 100 -14.7 -5.38958 | opp_overlap 2804929, overlap 2804923 ACTGACAAATAAAAA GGCTGGTAACC TTAGTTT GGTTACCAGCC TTCTCAATATACATG Ssed_2313 2805277 - 2804996 - | hypothetical protein Ssed_2314 2805591 - 2805274 - | hypothetical protein Ssed_2315 2806791 - 2805664 - | peptidase M14, carboxypeptidase A TERM 2784 2805976 - 2805961 - G 76 -9 -3.79251 | CATTTTAGCATCAAA CGAAGG TACG CCTTCG CAGCCAGCCAGAAAC TERM 2785 2806576 - 2806596 + g 73 -5.3 -4.60797 | opp_overlap 2806576 GTCATATGTAGCAAC GGCTTGGTA ATT TTCCCAGCC TTTTGTATATGAGGC TERM 2786 2806994 - 2806981 - R 86 -4.5 -5.46698 | CTGAAAAGCAAAAAA GCCAC ACTA ATGGC GGCTTTTATCGGGTA Ssed_2316 2807699 - 2807019 - | response regulator receiver protein TERM 2787 2807860 - 2807877 + r 90 -11.3 -4.11484 | opp_overlap 2807860 GATTGATAAAACAAA GGCCAGA ATAT TCTGGCC TTTTGAAAAGTTAAA TERM 2788 2807877 - 2807860 - R 95 -11.3 -4.7878 | opp_overlap 2807860 GATTGATAAAACAAA GGCCAGA ATAT TCTGGCC TTTTGAAAAGTTAAA Ssed_2317 2809698 - 2807920 - | hypothetical protein TERM 2789 2808637 - 2808651 + g 76 -7.2 -4.37886 | TAAGGTAACGAGTTG TTTGTC ATT GACAAA TTTTATCAAGGCTGG TERM 2790 2809809 - 2809756 - R 93 -13.6 -2.96873 | opp_overlap 2809768, overlap 2809768 AGGCTTAGTAAAGCA TGTATAAAAAAATATTTCAGCTTC GATACT GAAGCTGAAATATTGTGTTACACA CTTGGTAGACTGCAC TERM 2791 2809797 - 2809768 - R 100 -12.4 -5.64274 | opp_overlap 2809768, overlap 2809756 GCATGTATAAAAAAA TATTTCAGCTTC GATACT GAAGCTGAAATA TTGTGTTACACACTT TERM 2792 2809768 - 2809797 + r 95 -13.1 -3.66556 | opp_overlap 2809756 2809768 GCATGTATAAAAAAA TATTTCAGCTTCG ATAC TGAAGCTGAAATA TTGTGTTACACACTT Ssed_2318 2811827 - 2809881 - | 23S rRNA (Gm2251)-methyltransferase Ssed_2319 2812865 - 2812011 - | endonuclease/exonuclease/phosphatase TERM 2793 2812745 - 2812733 - G 77 -6.3 -4.60041 | opp_overlap 2812733 2812732 ACTGAGTTTGAAAAA TTGGT TCG ACCAA ATTAATCATCACCTT Ssed_2320 2813076 - 2814548 + | cardiolipin synthetase TERM 2794 2814890 - 2814909 + F 100 -13.6 -5.32944 | opp_overlap 2814890 CATATTTAGAAAAAA GGCTGTCC GAAT GGACAGCC TTTTTTCGTTCTGGG TERM 2795 2814909 - 2814890 - f 100 -13.6 -5.29782 | opp_overlap 2814890 CATATTTAGAAAAAA GGCTGTCC GAAT GGACAGCC TTTTTTCGTTCTGGG Ssed_2321 2815228 - 2817111 + | nucleotidyltransferase Ssed_2322 2817115 - 2817831 + | DNA polymerase III subunit epsilon TERM 2796 2817863 - 2817914 + T 100 -16.2 -4.36262 | gap 1, opp_overlap 2817868, overlap 2817868 AAAGCTTTAGCAATA AAAAAGCCGAGTGATGCAG-AATTC AAA GAATAATTGCATCACTCGGCTTTTA TTTTGATCTAACTAT TERM 2797 2817868 - 2817909 + T 100 -16.1 -5.16132 | gap 1, opp_overlap 2817868, overlap 2817863 TTTAGCAATAAAAAA GCCGAGTGATGCAG-AATTC AAA GAATAATTGCATCACTCGGC TTTTATTTTGATCTA TERM 2798 2817909 - 2817868 - T 100 -13.9 -5.5112 | gap 1, opp_overlap 2817868 2817863 TTTAGCAATAAAAAA GCCGAGTGATGC-AGAATTC AAA GAATAATTGCATCACTCGGC TTTTATTTTGATCTA Ssed_2323 2819515 - 2817938 - | glycine betaine transporter Ssed_2324 2820735 - 2819755 - | NAD+ synthetase TERM 2799 2821057 - 2821038 - R 91 -7.8 -5.24129 | opp_overlap 2821038 CTCGTCCACAAAAAA GCCCCATC TTTC GACAGGGC TTGATACGTACACAC Ssed_2325 2823088 - 2821094 - | methyl-accepting chemotaxis sensory transducer TERM 2800 2823195 - 2823179 - R 100 -5.1 -5.71712 | TGTTATAGAAAAAAA GCCTCCA AAA TGAAGAC TTTTTATTCAAGATC Ssed_2326 2824325 - 2823258 - | quinolinate synthetase TERM 2801 2823640 - 2823669 + g 70 -2.1 -4.87626 | gap 1 ACACTAGCAGGCGAT TCCGGGTGC-ACTA AAA TGGCCGCATCTGGA TTTTTAATCTTGAGC TERM 2802 2824436 - 2824408 - R 91 -11.9 -3.97834 | opp_overlap 2824408 2824413, overlap 2824414 TAAGCGTATTAGAAA TAAAAAGAACGCA TAT CGCGTTCCTTTTA TTTGCCATTTCAGTC TERM 2803 2824408 - 2824436 + r 76 -9 -3.72363 | opp_overlap 2824408 2824414, overlap 2824413 TAAGCGTATTAGAAA TAAAAAGAACGC ATATC GCGTTCCTTTTA TTTGCCATTTCAGTC TERM 2804 2824413 - 2824431 + r 74 -4.5 -4.91429 | opp_overlap 2824408 2824414, overlap 2824408 GTATTAGAAATAAAA AGAACGC ATATC GCGTTCC TTTTATTTGCCATTT TERM 2805 2824430 - 2824414 - R 95 -8.7 -5.40464 | opp_overlap 2824413 2824408, overlap 2824408 TATTAGAAATAAAAA GAACGCA TAT CGCGTTC CTTTTATTTGCCATT Ssed_2327 2826088 - 2824454 - | dihydrolipoamide acetyltransferase Ssed_2328 2827076 - 2826099 - | transketolase, central region TERM 2806 2826190 - 2826174 - G 70 -9.5 -3.18264 | TTTCTCATGGATCAA TGGATAC GGG GTATCCA AACCACAAACACGAC TERM 2807 2826588 - 2826572 - G 70 -2.1 -4.96028 | GCTCAAAAAAAACAA CCGGGTT TTT ATCTCGG ATAGAGGCGAGTAAT Ssed_2329 2828258 - 2827080 - | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) Ssed_2330 2829521 - 2828478 - | succinylglutamate desuccinylase TERM 2808 2830282 - 2830268 - g 83 -4.3 -5.42259 | CTACCTGGAAAAAAA CAACT TACCC AGTTG TCACATCTCTTACTA Ssed_2331 2829819 - 2830298 + | peptide methionine sulfoxide reductase Ssed_2332 2832302 - 2830647 - | phosphoglucomutase TERM 2809 2832362 - 2832339 - R 79 -9.6 -3.62046 | opp_overlap 2832339 2832338 2832332 2832330 2832358 GGATCGCTTCAAGAA TTGCGCACCC ACAA AGGTGCACAA GTTGTGATGTTTAAG Ssed_2333 2832923 - 2832381 - | replication initiation regulator SeqA Ssed_2334 2833215 - 2833991 + | alpha/beta hydrolase fold TERM 2810 2834098 - 2834111 + G 82 -5.3 -5.10497 | AACAAATTGAAGCTT TAGGT TTAA ACCTA TTTTTTGCATCAATT TERM 2811 2834217 - 2834231 + G 76 -9.2 -3.85698 | TGGTTAGTTTTATTT CTCGGC TGC GCCGGG TTTATAGCAAAAGGA Ssed_2335 2834064 - 2834285 + | hypothetical protein Ssed_2336 2834297 - 2834572 + | LexA regulated protein Ssed_2337 2834621 - 2835151 + | flavodoxin TERM 2812 2835202 - 2835188 - f 90 -11.4 -3.92625 | opp_overlap 2835188 CAGATTCGAATTAAA GCGGCT TCC AGCCGC TTTTTTTATGCTTAA TERM 2813 2835188 - 2835202 + F 100 -11.4 -5.71983 | opp_overlap 2835188 CAGATTCGAATTAAA GCGGCT TCC AGCCGC TTTTTTTATGCTTAA Ssed_2338 2835236 - 2836414 + | hypothetical protein Ssed_2339 2836460 - 2837020 + | elongation factor P TERM 2814 2837046 - 2837062 + F 100 -8 -5.76633 | opp_overlap 2837046 TTAATACTTTGAAAA CCAGTG CCTGT CACTGG TTTTTTTGTATCTGA TERM 2815 2837062 - 2837046 - f 77 -8 -4.14472 | opp_overlap 2837046 TTAATACTTTGAAAA CCAGTG CCTGT CACTGG TTTTTTTGTATCTGA Ssed_2340 2837310 - 2838524 + | aminotransferase AlaT TERM 2816 2838549 - 2838589 + T 100 -15 -3.47322 | gap 1, opp_overlap 2838561, overlap 2838551 2838561 CTAGACATTATGTTT CG-CCGATTTAAAGCGATC ATTC GATCGCTTTAAATCGCTCG TTGCTTGTAATGAAC TERM 2817 2838551 - 2838586 + T 100 -16.4 -2.87988 | opp_overlap 2838561, overlap 2838549 2838561 AGACATTATGTTTCG CCGATTTAAAGCGATC ATTC GATCGCTTTAAATCGC TCGTTGCTTGTAATG TERM 2818 2838561 - 2838576 + T 76 -9 -3.67564 | opp_overlap 2838561, overlap 2838551 2838549 TTTCGCCGATTTAAA GCGATC ATTC GATCGC TTTAAATCGCTCGTT TERM 2819 2838576 - 2838561 - T 76 -9 -3.64703 | opp_overlap 2838561 2838551 2838549 TTTCGCCGATTTAAA GCGATC ATTC GATCGC TTTAAATCGCTCGTT Ssed_2341 2839630 - 2838578 - | galactose-1-phosphate uridylyltransferase TERM 2820 2839769 - 2839746 - R 76 -9 -3.62775 | ATCATTCCTTAAGAA TTGTGGATAA TTGC TTACCCACAA TCCCAAAGCAGACCA Ssed_2342 2848241 - 2839803 - | putative outer membrane adhesin like proteiin TERM 2821 2842347 - 2842371 + g 71 -7.1 -4.00066 | opp_overlap 2842338, overlap 2842333 2842348 2842350 ACCAGACGCCAGGCC GGATTCGGCCA CGC TGGCAGAATCG TTTATCGCTTCTGGG TERM 2822 2842348 - 2842370 + g 72 -10.6 -2.99558 | opp_overlap 2842338, overlap 2842347 2842333 2842350 CCAGACGCCAGGCCG GATTCGGCCA CGC TGGCAGAATC GTTTATCGCTTCTGG TERM 2823 2848703 - 2848679 - R 79 -8.7 -3.99353 | opp_overlap 2848681 TAGAGAGCAATGAAA GAGGTGATT CTTAGTC AATCACCTC TCTACGGCAATTTAC TERM 2824 2848756 - 2848726 - R 77 -9.7 -3.58269 | CAATTTACGGTGAAA CTGGCGATAGGGC TCTAT GCTCTACCACCAG CTCAATATTAAGAGG Ssed_2343 2850820 - 2848787 - | hypothetical protein Ssed_2344 2851955 - 2851080 - | AraC family transcriptional regulator TERM 2825 2851162 - 2851146 - G 73 -5.1 -4.62069 | overlap 2851148 AAAAATATCATAAAA TCGGCTC ACG GAACCAA AACCGGCCTCTAAAG Ssed_2345 2852145 - 2852732 + | hypothetical protein Ssed_2346 2852754 - 2854088 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein Ssed_2347 2854847 - 2854158 - | UbiE/COQ5 methyltransferase TERM 2826 2854613 - 2854623 + g 75 -3.2 -5.07652 | CGATGCCGATGTTTG TTCC TGT GGGA TTTTGTTTTACAAGC TERM 2827 2855389 - 2855374 - R 95 -6.1 -5.65177 | opp_overlap 2855374 AGATGCATAAAAAAA CGCAC ATAAAA GTGCG TTTATATAGATGCGG Ssed_2348 2856054 - 2855422 - | hypothetical protein TERM 2828 2856049 - 2856031 - G 85 -4.7 -5.5074 | TAATCCAAGAAAAAA TTTAACA TAAAG TGTTAAA TCCAAGTACTTACCC TERM 2829 2856331 - 2856358 + H 76 -2.1 -5.40072 | TCTCCATGGAGATGA TTTAGCCAAAT CACCAA GTTTTGCTAAA TTTTTTTCGAGGAAC TERM 2830 2856588 - 2856574 - g 73 -7.2 -4.21607 | opp_overlap 2856574 GTGATTGAAGATAAA GTGATT AAG AATCAC TTTGCATCTGAATAC TERM 2831 2858243 - 2858219 - g 74 -2.7 -5.1675 | overlap 2858220 TTACCGATGAAAAAA CCGGCATGAAG TAC CCTATTGCCGA TTATCAGCTAACACC Ssed_2349 2856379 - 2858979 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2832 2859054 - 2859022 - T 90 -12.9 -2.70766 | opp_overlap 2859027, overlap 2859027 AAGATTTGACATAAT TAAAAGCCAGTTACC TTA AGTAACTGGCTTTTT TCTACTCTAGGTAGT TERM 2833 2859027 - 2859049 + T 100 -12.1 -5.34555 | opp_overlap 2859027 2859022 TTGACATAATTAAAA GCCAGTTAC CTTAA GTAACTGGC TTTTTTCTACTCTAG TERM 2834 2859049 - 2859027 - T 100 -12.8 -4.53034 | opp_overlap 2859027, overlap 2859022 TTGACATAATTAAAA GCCAGTTACC TTA AGTAACTGGC TTTTTTCTACTCTAG Ssed_2350 2859868 - 2859074 - | hypothetical protein TERM 2835 2859616 - 2859644 + g 73 -10.3 -3.16564 | overlap 2859618 TCAATGTCACAGGCT TTCCATTGCCGAC AGT GTCGACAATGGTA TTGATCAGCTGCACG TERM 2836 2859618 - 2859642 + g 84 -12.9 -3.14602 | overlap 2859616 AATGTCACAGGCTTT CCATTGCCGAC AGT GTCGACAATGG TATTGATCAGCTGCA TERM 2837 2860096 - 2860064 - R 72 -9.2 -3.30441 | opp_overlap 2860069 2860070 2860089, overlap 2860070 GATGACTGTTTATAA CAAAAAGCCCCAAC TGAAT GTTGAGGCCTTATG CGCTGAGTGAGGCTA TERM 2838 2860090 - 2860070 - R 93 -9 -5.18726 | opp_overlap 2860070 2860069 2860089, overlap 2860064 TGTTTATAACAAAAA GCCCCAAC TGAAT GTTGAGGC CTTATGCGCTGAGTG Ssed_2351 2862308 - 2860134 - | malate synthase G TERM 2839 2862078 - 2862066 - G 74 -9.1 -3.61894 | AATCTTGGTCAAGAA CGCCT TAT AGGCG TCAGGTTCATGCTGC Ssed_2352 2863478 - 2862534 - | transcriptional regulator, LysR family protein Ssed_2353 2863595 - 2865178 + | isocitrate lyase TERM 2840 2865247 - 2865226 - T 91 -13.1 -3.14468 | opp_overlap 2865226 TCCCACTAGAGCCAA GCCAGAGTA GCAA TACTCTGGC TTTTTTTATTGCCAA TERM 2841 2865226 - 2865247 + T 100 -13.1 -5.7946 | opp_overlap 2865226 TCCCACTAGAGCCAA GCCAGAGTA GCAA TACTCTGGC TTTTTTTATTGCCAA Ssed_2354 2865956 - 2865282 - | nucleotidase TERM 2842 2865708 - 2865735 + g 76 -8.6 -4.08216 | gap 1 CGATAAGAAGGCACT GTTAAG-GTGACT TGC GGTCACACTTAAC TTTTCAGCCCAGTGG TERM 2843 2866045 - 2866063 + r 72 -4.5 -4.77173 | GACAGCATAGGGATA CTCTCGT TAGAT GCGGGAG TTTATTTTATAAGCC TERM 2844 2866138 - 2866155 + r 72 -9.9 -3.0094 | GACAATAACCTGAGC CGAGAGT TTTC ACTCTCG TATGTATCAATAAGG Ssed_2355 2866723 - 2866172 - | hypothetical protein TERM 2845 2866659 - 2866645 - G 90 -2.8 -5.79526 | ATAGTTGAAAAAAAA GGGTTA GAA TAAGCC CGATTTGTATCGTTC Ssed_2356 2868048 - 2866720 - | membrane protein-like protein TERM 2846 2868181 - 2868160 - R 100 -13.1 -4.98672 | GCTAAAAACAGAAAA GGCCAGAAT AAAT ATTCTGGCC TCAATGAGTAAGTCT Ssed_2357 2870273 - 2868219 - | peptidase S9 prolyl oligopeptidase TERM 2847 2870450 - 2870416 - R 100 -17.4 -3.71607 | opp_overlap 2870419 2870422, overlap 2870422 TGAACACTACCCAAA TAATAAGGCTTAGGCA AGA TGCCTAAGCCGTATTA TCGGTCTAAAGAGGT TERM 2848 2870419 - 2870447 + r 100 -14.7 -3.39327 | opp_overlap 2870416 2870422, overlap 2870422 ACACTACCCAAATAA TAAGGCTTAGGCA AGA TGCCTAAGCCGTA TTATCGGTCTAAAGA TERM 2849 2870422 - 2870444 + r 100 -16.4 -2.55712 | opp_overlap 2870416 2870422, overlap 2870419 CTACCCAAATAATAA GGCTTAGGCA AGA TGCCTAAGCC GTATTATCGGTCTAA TERM 2850 2870444 - 2870422 - R 100 -16.4 -4.10744 | opp_overlap 2870422 2870419, overlap 2870416 CTACCCAAATAATAA GGCTTAGGCA AGA TGCCTAAGCC GTATTATCGGTCTAA Ssed_2358 2872022 - 2870484 - | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 2851 2873141 - 2873117 - g 78 -9.3 -4.13767 | GCCTCGATTTGAAAA TGCAGAAGCAG ACA CCTCTTCTGCA CTCGAACTCGCCGAA Ssed_2359 2872233 - 2873642 + | para-aminobenzoate synthase, subunit I Ssed_2360 2873696 - 2874265 + | NUDIX hydrolase Ssed_2361 2874728 - 2874393 - | hypothetical protein TERM 2852 2875081 - 2875102 + G 71 -4.4 -4.6971 | opp_overlap 2875074, overlap 2875094 GGGTAAGATCTCGCC GAGATTCC AAGGCC GGCATCTC TTTTCTTGCCGTTTA Ssed_2362 2874993 - 2876393 + | asparaginyl-tRNA synthetase TERM 2853 2876448 - 2876421 - T 81 -11.4 -2.97676 | opp_overlap 2876428, overlap 2876428 AGTTAGCCAAACAAT GAAAAAACGCCC AAAT GGGCGTTTTTTT TATATCTGATGTTTA TERM 2854 2876441 - 2876428 - T 100 -9.5 -5.4148 | opp_overlap 2876428, overlap 2876421 CAAACAATGAAAAAA CGCCC AAAT GGGCG TTTTTTTTATATCTG TERM 2855 2876428 - 2876441 + T 100 -9.5 -6.06529 | opp_overlap 2876428 2876421 CAAACAATGAAAAAA CGCCC AAAT GGGCG TTTTTTTTATATCTG Ssed_2363 2877509 - 2876475 - | hypothetical protein Ssed_2364 2878518 - 2877553 - | putative putative tight adherence TadC-like transmembrane protein TERM 2856 2878320 - 2878331 + g 85 -5.8 -5.03405 | GCGTGGCATTGACAT CCGT TTGT ACGG TTTTTATCTGCTCTT Ssed_2365 2879498 - 2878521 - | Flp pilus assembly protein TadB TERM 2857 2879218 - 2879206 - G 71 -6.3 -4.29227 | opp_overlap 2879204 2879206 GCAAGCAGGAAGAAA TGATG GCC CATCA TCTTATAATCAGCAA TERM 2858 2879257 - 2879269 + g 75 -3.4 -5.06451 | CGATAGCTTAAATTT TCGA TGAAT TCGA TTTTTTCCAATGCTC Ssed_2366 2880835 - 2879510 - | putative pilus assembly protein TERM 2859 2880025 - 2880051 + g 83 -11.6 -3.59979 | TTTGGGTGATTTCAC CACGTCCTTCAA TAT TTGCAGGGCGTG TTTCCAGTCGAACGG Ssed_2367 2882094 - 2880838 - | Flp pilus assembly protein ATPase CpaE-like protein Ssed_2368 2882620 - 2882162 - | hypothetical protein Ssed_2369 2883114 - 2882617 - | hypothetical protein Ssed_2370 2884509 - 2883124 - | hypothetical protein Ssed_2371 2886302 - 2884851 - | flp pilus assembly protein, secretin CpaC TERM 2860 2885018 - 2885031 + g 77 -3.8 -5.06816 | CAAAATCATCGGTTG GCAG TGATAT CTGC TTTTTATTAAACGGT TERM 2861 2885830 - 2885816 - G 73 -8.6 -3.89346 | overlap 2885820 TTTTCACTTTAGAAA CAGATG CGG CATCTG CATAGGCCTGAGCCA TERM 2862 2886195 - 2886173 - G 77 -6.3 -4.65895 | overlap 2886174 CCCGTGACTTAAAAA TCGGGATAT GTTTG ATATCCCGG CTCGCTCCAGTTGGA TERM 2863 2886194 - 2886174 - G 73 -9.8 -3.39216 | overlap 2886173 CCGTGACTTAAAAAT CGGGATAT GTTTG ATATCCCG GCTCGCTCCAGTTGG Ssed_2372 2887167 - 2886343 - | Flp pilus assembly protein CpaB-like protein TERM 2864 2886594 - 2886637 + g 71 -6.3 -4.29953 | gap 3, opp_overlap 2886606, overlap 2886596 TTAACACTTCAGCCT GCTCTAAATTGAGTTCGAG-AG TCA CTGCACGAAC-CAATTTAG-GC TTATTTTCATCATTT Ssed_2373 2888524 - 2887208 - | hypothetical protein Ssed_2374 2889101 - 2888526 - | hypothetical protein Ssed_2375 2889407 - 2889207 - | hypothetical protein TERM 2865 2889618 - 2889630 + r 74 -4.9 -4.82901 | opp_overlap 2889616 2889618 ATGTGACTAAATAGA GTATT AAT AATAC TTTTTCTGAAAGCCA Ssed_2376 2890468 - 2890016 - | transposase and inactivated derivative Ssed_2377 2891923 - 2890472 - | hypothetical protein Ssed_2378 2892284 - 2892526 + | hypothetical protein TERM 2866 2894506 - 2894480 - g 71 -3.1 -4.84033 | gap 1 ATACAAAAATGAAAA CCTGG-AGTT TAATAACT AACTACCAGG GTACAGCTCCTTGGC Ssed_2379 2892574 - 2894649 + | hypothetical protein Ssed_2380 2894861 - 2896102 + | GGDEF family protein Ssed_2381 2897642 - 2896701 - | glycosyltransferase, group 2 family protein Ssed_2382 2898417 - 2897686 - | generic methyltransferase Ssed_2383 2900095 - 2898488 - | hypothetical protein TERM 2867 2899056 - 2899045 - G 73 -2.2 -5.1356 | CTCCAGTAACAAAAA CGAT CCAA ACCG CCATAAGTGAGCCCG Ssed_2384 2900562 - 2900981 + | hypothetical protein Ssed_2385 2901775 - 2901011 - | hypothetical protein Ssed_2386 2902072 - 2902758 + | flagellin-like protein Ssed_2387 2906083 - 2902811 - | non-specific serine/threonine protein kinase TERM 2868 2904607 - 2904593 - G 79 -11.4 -3.1355 | opp_overlap 2904601 TCTATCTACAGGTAA GGCGAG TCG CTCGCC ACTATCGAGCTCCAT TERM 2869 2905976 - 2906001 + g 74 -11.3 -3.08679 | opp_overlap 2905970, overlap 2905981 GGACTTAAACTCGGC GCGAATAATCA AACC TGATTGTTCGC TCTTAACTAACAGCC TERM 2870 2906345 - 2906328 - R 100 -12.7 -4.54727 | GCCTCTAAATGAAAA GCCACCC CAAA GGGTGGC TCAAGTACTGTATTC Ssed_2388 2907171 - 2906404 - | cytochrome b561 Ssed_2389 2909554 - 2907329 - | hypothetical protein TERM 2871 2907435 - 2907419 - G 71 -6.6 -4.23213 | opp_overlap 2907419 TGCAGATCGAACAAA CTGAAG CTCCT CTTCAG TTTCTACCCCCTCCG TERM 2872 2909913 - 2909872 - R 74 -4 -5.03994 | gap 2, opp_overlap 2909885, overlap 2909874 2909877 2909882 GTTTATACAGAAAAA TATGATTTAACCAGCAGAAT GTAG ACTCTGCTGGTTAA--CATT GAGACTTAAGCTATT TERM 2873 2909911 - 2909874 - R 73 -6.6 -4.14422 | gap 2, opp_overlap 2909885, overlap 2909872 2909877 2909882 TTATACAGAAAAATA TGATTTAACCAGCAGAAT GTAG ACTCTGCTGGTTAA--CA TTGAGACTTAAGCTA TERM 2874 2909910 - 2909877 - R 82 -11.9 -3.07484 | opp_overlap 2909885, overlap 2909874 2909872 2909882 TACAGAAAAATATGA TTTAACCAGCAGAAT GTAG ACTCTGCTGGTTAAC ATTGAGACTTAAGCT TERM 2875 2909905 - 2909882 - R 83 -11.8 -3.16564 | opp_overlap 2909885, overlap 2909877 2909874 2909872 AAAAATATGATTTAA CCAGCAGAAT GTAG ACTCTGCTGG TTAACATTGAGACTT Ssed_2390 2911183 - 2909924 - | Fmu (Sun) domain-containing protein TERM 2876 2911256 - 2911271 + r 80 -4.6 -5.1861 | opp_overlap 2911251 2911256 CGATATAATACAAAA GCGACC CTTA GATCGC TTTTTTCATCATCAG TERM 2877 2911271 - 2911256 - R 81 -6.8 -4.76963 | opp_overlap 2911256, overlap 2911251 CGATATAATACAAAA GCGACC CTTA GATCGC TTTTTTCATCATCAG Ssed_2391 2912716 - 2911328 - | DEAD/DEAH box helicase domain-containing protein Ssed_2392 2913526 - 2912906 - | hypothetical protein Ssed_2393 2915981 - 2913528 - | signal transduction protein Ssed_2394 2917064 - 2915988 - | spermidine/putrescine-binding periplasmic protein Ssed_2395 2917883 - 2917461 - | putative glyoxalase family protein TERM 2878 2917955 - 2917943 - H 77 -6.3 -4.62069 | GCGGGATTTTAAAAA GGTTT GTT AAACC GCTTCCCTATATCCA Ssed_2396 2918040 - 2918189 + | hypothetical protein TERM 2879 2918215 - 2918242 + T 85 -5.6 -5.30616 | gap 1, opp_overlap 2918215 2918216, overlap 2918209 2918215 2918216 ATGCTCAAAGTAGAA GT-GCACCAGACT CTA AGTCTTGTGCGGC TTTTTCTTTACATAG Ssed_2397 2918685 - 2918227 - | hypothetical protein Ssed_2398 2918813 - 2919061 + | hypothetical protein Ssed_2399 2919231 - 2920517 + | acetyl-CoA hydrolase/transferase TERM 2880 2920554 - 2920576 + T 72 -9.2 -3.39844 | opp_overlap 2920554, overlap 2920552 TAATTTGTGATGTAA GCCAGTTG CGTTCGA CAACTGGC TATTTAACCTGTCAG TERM 2881 2920576 - 2920554 - T 72 -9.9 -3.06133 | opp_overlap 2920554 2920552 TAATTTGTGATGTAA GCCAGTTGC GTTCG ACAACTGGC TATTTAACCTGTCAG Ssed_2400 2921112 - 2920633 - | hypothetical protein Ssed_2401 2922067 - 2921147 - | zinc carboxypeptidase-related protein TERM 2882 2921816 - 2921834 + g 81 -11 -3.77588 | opp_overlap 2921809 ACCATGAACGCCTCC GGTGACCA AGA TGGTCGCC TTGTTGCTATCCCAT Ssed_2402 2922681 - 2922175 - | hypothetical protein Ssed_2403 2923179 - 2922811 - | hypothetical protein Ssed_2404 2923404 - 2924321 + | LysR family transcriptional regulator Ssed_2405 2924581 - 2925678 + | agmatine deiminase Ssed_2406 2925750 - 2926838 + | putrescine-binding periplasmic protein precursor Ssed_2407 2926874 - 2927833 + | putative carbon-nitrogen hydrolase TERM 2883 2927843 - 2927874 + T 100 -16 -4.19624 | opp_overlap 2927843, overlap 2927873 AGATAACCAAAAAAA TAGCGCCTTAAACC AATC GGTATAAGGCGCTA TTTATCTTAGAGATA TERM 2884 2927874 - 2927843 - T 100 -16 -5.69379 | opp_overlap 2927843 2927873 AGATAACCAAAAAAA TAGCGCCTTAAACC AATC GGTATAAGGCGCTA TTTATCTTAGAGATA Ssed_2408 2929039 - 2927897 - | cupin 4 family protein Ssed_2409 2929405 - 2931495 + | elongation factor G TERM 2885 2931531 - 2931551 + F 100 -14 -5.63517 | opp_overlap 2931531 CTAGACATGTAAAAA GCCCGCGA CTTAT TCGCGGGC TTTTTTGTTTGGAAC TERM 2886 2931551 - 2931531 - f 100 -14 -4.72846 | opp_overlap 2931531 CTAGACATGTAAAAA GCCCGCGA CTTAT TCGCGGGC TTTTTTGTTTGGAAC TERM 2887 2931651 - 2931625 - f 73 -6.6 -4.18674 | TTTATATAGAAATAA TACCGAACGGTA TAA TACCAATCAGTA TAAAGATGTGATCGC TERM 2888 2931763 - 2931779 + F 74 -5 -4.67353 | opp_overlap 2931763, overlap 2931765 TCGGATGTGCTAAAA CTCGCC TGATT GGCGTG TTTTTGGCTGCCTAC Ssed_2410 2931924 - 2932550 + | DNA-directed DNA polymerase Ssed_2411 2933383 - 2932676 - | hypothetical protein TERM 2889 2934148 - 2934160 + G 70 -7.7 -3.85817 | opp_overlap 2934156, overlap 2934156 2934157 ATGGTAAAAGAAGCG CAGAG AGA CTCTG TTTCTAAACAGACAT Ssed_2412 2933737 - 2935374 + | methyl-accepting chemotaxis sensory transducer TERM 2890 2935391 - 2935411 + F 91 -13.3 -3.10522 | TTTCAAATGGGGTAG TTGGGGGCG TTT CGCCTCCAA TCTGTTAGATAAAGT Ssed_2413 2935481 - 2935867 + | hypothetical protein Ssed_2414 2935904 - 2936161 + | HPr family phosphocarrier protein TERM 2891 2936913 - 2936942 + G 80 -12.1 -2.75769 | opp_overlap 2936919, overlap 2936913 2936916 ACACGGCTATTTTAG CCAGAAGTGCCGG GATC CCGGCACTGCTGA GTTGTGATTTCGACG TERM 2892 2936913 - 2936943 + G 83 -11.9 -3.60151 | gap 1, opp_overlap 2936919, overlap 2936913 2936916 ACACGGCTATTTTAG C-CAGAAGTGCCGG GATC CCGGCACTGCTGAG TTGTGATTTCGACGA TERM 2893 2936916 - 2936939 + G 78 -12.4 -2.64805 | opp_overlap 2936919, overlap 2936913 2936913 CGGCTATTTTAGCCA GAAGTGCCGG GATC CCGGCACTGC TGAGTTGTGATTTCG TERM 2894 2936936 - 2936919 - g 87 -12.7 -3.36327 | opp_overlap 2936916 2936913 2936913 CTATTTTAGCCAGAA GTGCCGG GATC CCGGCAC TGCTGAGTTGTGATT Ssed_2415 2936336 - 2938036 + | phosphoenolpyruvate-protein phosphotransferase Ssed_2416 2938108 - 2938617 + | glucose-specific PTS system component Ssed_2417 2938992 - 2939336 + | hypothetical protein Ssed_2418 2939333 - 2940463 + | succinyl-diaminopimelate desuccinylase TERM 2895 2940735 - 2940721 - g 76 -8.6 -4.01564 | opp_overlap 2940717, overlap 2940711 CAAAAGAGTGATAAA GAGATC GTA GATCTC ATCATGCTCTGGTCT Ssed_2419 2940463 - 2941140 + | peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin Ssed_2420 2941189 - 2942025 + | alpha/beta hydrolase fold Ssed_2421 2942233 - 2942847 + | carbonate dehydratase TERM 2896 2943727 - 2943709 - g 83 -8.8 -4.58395 | TCGATTCGGTAAAAA CCATCACC TGT GGTGAAGG CGGCGCTGTGATCAC Ssed_2422 2943150 - 2944334 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 2897 2944357 - 2944378 + F 88 -10.9 -3.99805 | opp_overlap 2944357, overlap 2944351 AACCATATCATTCAA TTGCGCCTT AATT GAGGCGCAA TTTCACTTTTTACAG TERM 2898 2944378 - 2944357 - f 75 -10.2 -3.12378 | opp_overlap 2944351 2944357 AACCATATCATTCAA TTGCGCCT TAATTG AGGCGCAA TTTCACTTTTTACAG Ssed_2423 2944420 - 2945490 + | iron-containing alcohol dehydrogenase TERM 2899 2945522 - 2945506 - f 77 -9.4 -3.47349 | opp_overlap 2945506 TCTCTAAAGTGATAA GGGCTC CAATT GAGCCC TTTTTCTATAAATAA TERM 2900 2945506 - 2945522 + F 93 -9.4 -4.99035 | opp_overlap 2945506 TCTCTAAAGTGATAA GGGCTC CAATT GAGCCC TTTTTCTATAAATAA TERM 2901 2946236 - 2946221 - g 71 -2.6 -4.91459 | gap 1, overlap 2946223 GAAGATTTAGAAAAA CT-TGAG CAA CTCAGAG CGCTCGAACATGGCT Ssed_2424 2945609 - 2946346 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 2902 2946561 - 2946547 - g 71 -6.4 -4.18934 | GATGAGGCCAATAAA GCTGAA AAG CTCAGC GAAAACAACTCTGAC Ssed_2425 2946388 - 2946624 + | hypothetical protein TERM 2903 2946667 - 2946705 + F 100 -7 -5.71712 | gap 1, opp_overlap 2946667 GAAGAAGTGAAAAAG GCTTATAGCTT-ATTCT TATTAT AGAGTTAAGCTGTAAGC TTTTTTTGTATCCCC Ssed_2426 2946856 - 2947605 + | lysine decarboxylase family protein TERM 2904 2947698 - 2947664 - T 100 -16.6 -2.92618 | opp_overlap 2947669, overlap 2947669 CCTTTATAGAACAAT TAAAAGGCCTGCCAGT TTC ACTGACAGGCCTTTTG CTACTTTACACATCT TERM 2905 2947669 - 2947693 + T 100 -14.3 -4.39386 | opp_overlap 2947669 2947664 ATAGAACAATTAAAA GGCCTGCCAGT TTC ACTGACAGGCC TTTTGCTACTTTACA TERM 2906 2947693 - 2947669 - T 100 -16.5 -4.60317 | opp_overlap 2947669, overlap 2947664 ATAGAACAATTAAAA GGCCTGCCAGT TTC ACTGACAGGCC TTTTGCTACTTTACA Ssed_2427 2950827 - 2947732 - | acriflavin resistance protein TERM 2907 2950782 - 2950760 - G 75 -7.8 -4.16279 | GAGACGAGGCCAAAA GCGATAAGCA GAA TACTTATCAC AGAGGCAAAGACAGG Ssed_2428 2951909 - 2950824 - | RND family efflux transporter MFP subunit TERM 2908 2952132 - 2952147 + r 90 -10.4 -4.35874 | opp_overlap 2952132 TAAAAATAAAAAAAA GGAGGC ATAA GCCTCC TTTTAGGTTCTATTG TERM 2909 2952147 - 2952132 - R 100 -10.4 -6.4275 | opp_overlap 2952132 TAAAAATAAAAAAAA GGAGGC ATAA GCCTCC TTTTAGGTTCTATTG Ssed_2429 2953296 - 2952175 - | NlpB/DapX family lipoprotein TERM 2910 2952330 - 2952345 + g 75 -5.4 -4.68908 | opp_overlap 2952326, overlap 2952326 ACATTCGATAAGAAC CTTCCT CAAC AGGGAG TTTCTTTTCACTCCA Ssed_2430 2954184 - 2953300 - | dihydrodipicolinate synthase TERM 2911 2954429 - 2954447 + H 73 -2.4 -5.33785 | GCGGCTGTTATTAAA CGTGGTGT TAC ATATTACG TTTTTTCTAATAATT Ssed_2431 2954483 - 2955022 + | amino acid-binding ACT domain-containing protein Ssed_2432 2955045 - 2955515 + | redoxin domain-containing protein TERM 2912 2955568 - 2955527 - T 100 -15.3 -3.54662 | opp_overlap 2955539, overlap 2955529 2955539 TTAAACAGACCATAA TACCCACAAAAATGCCCGC AATA GCGGGCATTTTTGTATGAA GGCATTCTATGATGA TERM 2913 2955566 - 2955529 - T 100 -17.9 -3.33782 | opp_overlap 2955539, overlap 2955527 2955539 AAACAGACCATAATA CCCACAAAAATGCCCGC AATA GCGGGCATTTTTGTATG AAGGCATTCTATGAT TERM 2914 2955556 - 2955539 - T 100 -12.7 -4.91459 | opp_overlap 2955539, overlap 2955529 2955527 TAATACCCACAAAAA TGCCCGC AATA GCGGGCA TTTTTGTATGAAGGC TERM 2915 2955539 - 2955556 + T 100 -12.7 -4.96848 | opp_overlap 2955529 2955527 2955539 TAATACCCACAAAAA TGCCCGC AATA GCGGGCA TTTTTGTATGAAGGC TERM 2916 2955628 - 2955607 - T 82 -10.9 -3.47709 | ATAATATGACTACAA GGAGCCTCT TATA AAAGGCTCC CATCAATGGCCACTG Ssed_2433 2956255 - 2955647 - | lysine exporter protein (LysE/YggA) Ssed_2434 2956387 - 2957274 + | chromosome replication initiation inhibitor protein TERM 2917 2957354 - 2957377 + T 89 -9.6 -4.14739 | opp_overlap 2957359, overlap 2957359 AGCTAAAATGATCAA AAAAAGGGGC CAAA GCCCCTTTTC TTTTACCATGCCTAG TERM 2918 2957372 - 2957359 - T 100 -9.5 -5.5943 | opp_overlap 2957359 2957354 AAATGATCAAAAAAA GGGGC CAAA GCCCC TTTTCTTTTACCATG TERM 2919 2957359 - 2957372 + T 93 -9.5 -5.09259 | opp_overlap 2957359, overlap 2957354 AAATGATCAAAAAAA GGGGC CAAA GCCCC TTTTCTTTTACCATG Ssed_2435 2958485 - 2957400 - | hypothetical protein Ssed_2436 2958746 - 2958516 - | SirA family protein TERM 2920 2959980 - 2959969 - g 76 -2.2 -5.28481 | CACCCAACTAAAAAA GCGT AGCT ACAC ATTTAAAAATGCCGC TERM 2921 2960200 - 2960182 - g 73 -7.4 -4.30161 | TCAGAGAAAACTAAA GCCCACTT CGC AAGTGGTC AATACCAATCTGGCG TERM 2922 2960250 - 2960273 + G 73 -3.2 -4.87665 | gap 1, opp_overlap 2960250 2960271, overlap 2960251 2960254 ACCAAGCGACTAAAG CCAT-TCCTCT GTT AGAGGATATGA TTTTTCTGGATAGAC Ssed_2437 2959064 - 2960524 + | peptidase M48, Ste24p TERM 2923 2960540 - 2960572 + F 82 -11.4 -3.10894 | gap 1, overlap 2960535 2960542 TAGTATGCCCCCAGT C-ACCCGGACTGATG CTCT CATCGGTTCGGGTCG TTGAATGGTAATCCT TERM 2924 2960542 - 2960569 + F 93 -14.2 -2.76442 | overlap 2960535 2960540 GTATGCCCCCAGTCA CCCGGACTGATG CTCT CATCGGTTCGGG TCGTTGAATGGTAAT Ssed_2438 2960729 - 2961079 + | arsenate reductase Ssed_2439 2961094 - 2961465 + | hypothetical protein TERM 2925 2961515 - 2961490 - f 73 -7.5 -4.10429 | opp_overlap 2961493, overlap 2961492 2961493 AATTAGTTTTTAAAA TAGCAAGCGCC TCAT GGCGCTTGTTT TCCTTTAAACCCTCA TERM 2926 2961513 - 2961492 - f 80 -10.1 -3.64716 | opp_overlap 2961493, overlap 2961490 2961493 TTAGTTTTTAAAATA GCAAGCGCC TCAT GGCGCTTGT TTTCCTTTAAACCCT TERM 2927 2961512 - 2961493 - f 91 -13.6 -2.78508 | opp_overlap 2961493, overlap 2961492 2961490 TAGTTTTTAAAATAG CAAGCGCC TCAT GGCGCTTG TTTTCCTTTAAACCC TERM 2928 2961493 - 2961512 + F 100 -13.6 -4.54727 | opp_overlap 2961492 2961490 2961493 TAGTTTTTAAAATAG CAAGCGCC TCAT GGCGCTTG TTTTCCTTTAAACCC Ssed_2440 2961643 - 2963571 + | hypothetical protein TERM 2929 2963590 - 2963613 + T 82 -8.8 -4.17132 | AAGCGGATCTCAGTC GCGCAACTCA ATCT TGGGTCGCGC TTTGTTAAAACATTT Ssed_2441 2964357 - 2963647 - | DNA replication initiation factor Ssed_2442 2965541 - 2964432 - | hypothetical protein Ssed_2443 2965737 - 2966963 + | uracil-xanthine permease TERM 2930 2967029 - 2966992 - T 80 -11.5 -2.81951 | opp_overlap 2967002, overlap 2967002 TCACTAACAGACAAG CAATAAAAAAGCCTTTC GGGA GAAAGGCTTTTTTTATG TCAAATCTTAAGTCA TERM 2931 2967019 - 2967002 - T 100 -9.9 -5.57396 | opp_overlap 2967002, overlap 2966992 ACAAGCAATAAAAAA GCCTTTC GGGA GAAAGGC TTTTTTTATGTCAAA TERM 2932 2967002 - 2967019 + T 100 -9.9 -5.71712 | opp_overlap 2967002 2966992 ACAAGCAATAAAAAA GCCTTTC GGGA GAAAGGC TTTTTTTATGTCAAA Ssed_2444 2967446 - 2967099 - | glutaredoxin-like protein TERM 2933 2967536 - 2967522 - H 83 -5 -5.29445 | opp_overlap 2967522 TGGCAAGAACAAAAA CCTACT TTT AATAGG GTTATAACGATTCCT Ssed_2445 2967801 - 2968382 + | superoxide dismutase TERM 2934 2968449 - 2968409 - f 89 -12.1 -3.57462 | opp_overlap 2968411 2968421, overlap 2968412 2968421 CAGCCGATTTTTAAA GCATAAAAAAAAGGAGCTT ATC AAGCTCCTTTTTTATACTC CTTTGGTAATACTCC TERM 2935 2968411 - 2968447 + F 78 -11.1 -2.98761 | opp_overlap 2968409 2968412 2968421, overlap 2968421 GCCGATTTTTAAAGC ATAAAAAAAAGGAGCTT ATC AAGCTCCTTTTTTATAC TCCTTTGGTAATACT TERM 2936 2968446 - 2968412 - f 95 -14.6 -2.91695 | opp_overlap 2968411 2968421, overlap 2968409 2968421 CCGATTTTTAAAGCA TAAAAAAAAGGAGCTT ATC AAGCTCCTTTTTTATA CTCCTTTGGTAATAC TERM 2937 2968437 - 2968421 - f 100 -10.9 -6.04378 | opp_overlap 2968411 2968421, overlap 2968412 2968409 AAAGCATAAAAAAAA GGAGCTT ATC AAGCTCC TTTTTTATACTCCTT TERM 2938 2968421 - 2968437 + F 100 -10.9 -5.33785 | opp_overlap 2968421 2968412 2968409, overlap 2968411 AAAGCATAAAAAAAA GGAGCTT ATC AAGCTCC TTTTTTATACTCCTT TERM 2939 2968486 - 2968512 + F 100 -12.4 -4.19947 | overlap 2968491 TACTCCCCTCCTCCA CAGTTGCAACTG TTG CATTTGCAACTG TTTCTCATTGTTTTC TERM 2940 2969849 - 2969839 - g 73 -5.4 -4.55798 | GATCCTAAAGCAAAA TCCT ATC AGGA ATACCGCGATTACGC TERM 2941 2970149 - 2970129 - g 84 -12.7 -3.24924 | opp_overlap 2970128, overlap 2970127 GTCCTATTCAGAATA CGGTCAAAA TAT TTTTGACCG CTATGTCACCTACGC Ssed_2446 2968636 - 2970570 + | putative serine protein kinase, PrkA TERM 2942 2970610 - 2970575 - f 70 -7.7 -3.63922 | gap 1, opp_overlap 2970579, overlap 2970573 2970577 AGTCTTCTTAAAATA GACATT-CAGGGAGCA TTAAC TGCTCCCTACAATGAC TTGGGAGGTGCGCAT TERM 2943 2970608 - 2970577 - f 72 -8.9 -3.39908 | gap 1, opp_overlap 2970579, overlap 2970575 2970573 TCTTCTTAAAATAGA CATT-CAGGGAGCA TTAAC TGCTCCCTACAATG ACTTGGGAGGTGCGC TERM 2944 2970746 - 2970720 - g 88 -2.4 -5.74122 | CAGCAGATAAAAAAA GCTGT-GAGTGA TGCTG TCACTCGAC-GC AGTGTTACCGATGTT TERM 2945 2970789 - 2970778 - g 85 -5.8 -5.06103 | ATAAGGGTGAAAAAA TCGG GATC CCGA CGAAAGACATTAGTG Ssed_2447 2970606 - 2971892 + | hypothetical protein TERM 2946 2972250 - 2972224 - g 73 -9.5 -3.28447 | opp_overlap 2972241, overlap 2972222 TTATGGAGGAGAATA CCATCACAATG CAAGC CCTTGTGATGG CGCACGCAAGTTTCG Ssed_2448 2971902 - 2973422 + | hypothetical protein TERM 2947 2973729 - 2973754 + T 73 -10.5 -2.82327 | opp_overlap 2973735, overlap 2973735 2973752 CAGTTTACAGATATA AAAAAAGCGCC TATT GGCGCTTTTTA ATTTCAATGTCGCAA TERM 2948 2973735 - 2973748 + T 93 -9.5 -5.00138 | opp_overlap 2973735, overlap 2973729 ACAGATATAAAAAAA GCGCC TATT GGCGC TTTTTAATTTCAATG TERM 2949 2973748 - 2973735 - T 100 -9.5 -5.77988 | opp_overlap 2973729 2973735 ACAGATATAAAAAAA GCGCC TATT GGCGC TTTTTAATTTCAATG Ssed_2449 2974058 - 2973771 - | ribosomal protein L25 Ssed_2450 2974746 - 2974198 - | hypothetical protein Ssed_2451 2976254 - 2974857 - | peptidoglycan binding domain-containing protein Ssed_2452 2977048 - 2976455 - | methylation site containing protein TERM 2950 2977400 - 2977387 - R 89 -6.7 -5.28176 | TGCAGGTACAAAAAA CTGAC GCAA GTCAG GGCTACTGTTCATAT TERM 2951 2977539 - 2977559 + r 85 -12.6 -3.10715 | opp_overlap 2977539 TGCAGATACAAAAAA GCCCTGAC AATAA GTCAGGGC TTGAATGATGGTACC TERM 2952 2977559 - 2977539 - R 100 -12.6 -5.4251 | opp_overlap 2977539 TGCAGATACAAAAAA GCCCTGAC AATAA GTCAGGGC TTGAATGATGGTACC TERM 2953 2977691 - 2977658 - R 78 -11.1 -3.0644 | opp_overlap 2977665, overlap 2977665 ACTGAATTTGGAATA CAAAAAAGCCCCAAC TTTC GTTGAGGCTTTCATG CTCAATCTCTAAGAG TERM 2954 2977684 - 2977665 - R 100 -10 -5.47159 | opp_overlap 2977665, overlap 2977658 TTGGAATACAAAAAA GCCCCAAC TTTC GTTGAGGC TTTCATGCTCAATCT TERM 2955 2977665 - 2977684 + r 73 -7.8 -3.80014 | opp_overlap 2977658 2977665 TTGGAATACAAAAAA GCCCCAAC TTTC GTTGAGGC TTTCATGCTCAATCT TERM 2956 2977752 - 2977772 + r 73 -10.5 -2.89742 | overlap 2977755 GGCACGCTTATTCAG CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 2957 2977755 - 2977769 + r 72 -8.6 -3.5947 | overlap 2977752 ACGCTTATTCAGCGA GGGATT TTA AATCCC TTGTGTCTACCGATT Ssed_2453 2978761 - 2978204 - | glutamate-1-semialdehyde 2,1-aminomutase Ssed_2454 2980638 - 2978809 - | excinuclease ABC subunit C TERM 2958 2979156 - 2979173 + g 83 -8.5 -4.64844 | opp_overlap 2979158 CTTCACCTTTCGCAA CACCAAT CAGC ATTGGTG TTTTGTCTATATCGA TERM 2959 2979175 - 2979192 + g 71 -4.2 -4.7254 | AATCAGCATTGGTGT TTTGTC TATATC GACAAA TTTTTCATCGACAAT TERM 2960 2979896 - 2979912 + g 76 -10.9 -3.24747 | overlap 2979891 ACATCCATATCGCCG GAGGTGT TTG ACACCTC TTGCTGCTCTGCCAC TERM 2961 2980465 - 2980515 + g 85 -2.7 -5.54264 | gap 2 GATATGTGAAACCAA CGCCTGAGTTTTTACATTCG-G-CA GAT TGACGCGAAAATAGGAACTCAGCCG TTTTTTTAAGTCTTT Ssed_2455 2981329 - 2980685 - | response regulator TERM 2962 2981785 - 2981750 - R 100 -15.6 -3.04517 | opp_overlap 2981756, overlap 2981756 ATGTCCTTTTAAAAC GAAAAAGCCCCTAACA TTGC TGTTAGGGGCTTCATC TGAATATGGCGGAGA TERM 2963 2981756 - 2981779 + r 100 -15.4 -3.28912 | opp_overlap 2981750 2981756 TTTTAAAACGAAAAA GCCCCTAACA TTGC TGTTAGGGGC TTCATCTGAATATGG TERM 2964 2981779 - 2981756 - R 100 -15.4 -5.0925 | opp_overlap 2981756, overlap 2981750 TTTTAAAACGAAAAA GCCCCTAACA TTGC TGTTAGGGGC TTCATCTGAATATGG TERM 2965 2981857 - 2981878 + r 100 -15.9 -3.38786 | opp_overlap 2981857 TGACTATACGAAAAA GCCCCAGCA TTTC TGCTGGGGC TTCATCTTAAATGTG TERM 2966 2981878 - 2981857 - R 100 -15.9 -4.82667 | opp_overlap 2981857 TGACTATACGAAAAA GCCCCAGCA TTTC TGCTGGGGC TTCATCTTAAATGTG Ssed_2456 2982583 - 2982149 - | glutathione-dependent formaldehyde-activating, GFA Ssed_2457 2983505 - 2982783 - | hypothetical protein TERM 2967 2983481 - 2983471 - G 70 -2.4 -5.00616 | overlap 2983474 CCTTGTTGCAAAAAA GAGC TCA GCGC AGCGGATAACGGTAC Ssed_2458 2984213 - 2983569 - | hypothetical protein TERM 2968 2984308 - 2984277 - H 73 -10.2 -2.81133 | TACCGACCCAGCACA GGCTTGCGCCGA AGGTGATA TCGACACAAGCC AAATGTTCAGGGTTT Ssed_2459 2984388 - 2984681 + | ISxac3 transposase Ssed_2460 2984771 - 2985538 + | transposase InsF for insertion sequence IS3A/B/C/D/E/fA Ssed_2461 2986565 - 2986302 - | hypothetical protein TERM 2969 2987052 - 2986997 - R 100 -20.6 -2.76263 | gap 1, opp_overlap 2986997, overlap 2986994 CTTACCATTTAACGA CGCCAGTAGGGGCCTAAAAACCAGAGC GAA GCGGCGGTTTTTAGGCCCCT-CTGGCC GACCTTGTTAGGAGC Ssed_2462 2987551 - 2987060 - | hypothetical protein TERM 2970 2987355 - 2987341 - G 76 -2.1 -5.25656 | gap 1, opp_overlap 2987341, overlap 2987333 AAAATGAGTAAAAAA CAG-GG TTTT CCACTG TATGATCCTCTTCCG TERM 2971 2987488 - 2987460 - G 72 -6 -4.33274 | overlap 2987461 2987462 2987476 CTTACATCATCAAAA TCTACGGTCCCA TAACC TGAGACCGTAAT AGCCGCAATTATTAT TERM 2972 2987487 - 2987461 - G 70 -9.5 -3.19482 | overlap 2987460 2987462 2987476 TTACATCATCAAAAT CTACGGTCCCA TAACC TGAGACCGTAA TAGCCGCAATTATTA TERM 2973 2987486 - 2987462 - G 72 -10.8 -2.51207 | overlap 2987461 2987460 2987476 TACATCATCAAAATC TACGGTCCCA TAACC TGAGACCGTA ATAGCCGCAATTATT TERM 2974 2987690 - 2987674 - R 75 -9.5 -3.37056 | overlap 2987664 ACCATTGATTTATAA TCACTCT ATC AGAGTGA TGCTGAAAAAACGAG Ssed_2463 2988218 - 2988003 - | XRE family transcriptional regulator TERM 2975 2988289 - 2988267 - R 77 -10.6 -2.80291 | overlap 2988270 2988282 AATTACTTTATCATA GTAGTCCCTA TTA TAGGGACGAC CCGTACCGTCCCCGA TERM 2976 2988286 - 2988270 - R 76 -10.9 -2.66634 | overlap 2988267 2988282 TACTTTATCATAGTA GTCCCTA TTA TAGGGAC GACCCGTACCGTCCC Ssed_2464 2990349 - 2988760 - | hypothetical protein TERM 2977 2989232 - 2989250 + g 88 -2.4 -5.81412 | CGTGTAGCATAGTTG TAAGGTCG CTC CGATTTTG TTTTTTTTGCATCAC TERM 2978 2990410 - 2990452 + r 73 -9.4 -3.14136 | gap 1 TCCCCCTTGCCAGCA GCTATCGTTTCATCTTTTG CGTAGC CAAAAG-TGTGACGATAGC TTAGCTGGTTAATAC Ssed_2465 2991693 - 2990548 - | putative pore-forming cytotoxin integrase Ssed_2466 2993121 - 2991829 - | hypothetical protein TERM 2979 2993200 - 2993166 - H 100 -17.4 -2.89055 | opp_overlap 2993169 2993174, overlap 2993174 GAAATGCTTCAGATA CAAAAAAAGCCGTTGA TAA TCAACGGCTTTTCTCG ATTTTAATATGGCGG TERM 2980 2993169 - 2993197 + H 90 -13.3 -2.79239 | opp_overlap 2993166 2993174, overlap 2993174 ATGCTTCAGATACAA AAAAAGCCGTTGA TAA TCAACGGCTTTTC TCGATTTTAATATGG TERM 2981 2993192 - 2993174 - H 100 -13.2 -5.76633 | opp_overlap 2993169 2993174, overlap 2993166 TCAGATACAAAAAAA GCCGTTGA TAA TCAACGGC TTTTCTCGATTTTAA TERM 2982 2993174 - 2993192 + H 100 -13.2 -4.54477 | opp_overlap 2993174 2993166, overlap 2993169 TCAGATACAAAAAAA GCCGTTGA TAA TCAACGGC TTTTCTCGATTTTAA Ssed_2467 2993525 - 2995267 + | ATP-dependent protease TERM 2983 2995391 - 2995367 - g 79 -2.2 -5.45652 | gap 2, overlap 2995374 AGTTTCAATAAAAAA GACCTAATAGCC TGC GGCCAT--GGTC AGTTATTCGGTAAAA Ssed_2468 2995337 - 2995852 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase Ssed_2469 2996108 - 2995932 - | ribosome modulation factor TERM 2984 2996149 - 2996136 - R 71 -6.7 -4.12532 | opp_overlap 2996135 TGTTCTACATACAAA GAAGC AATA GCTTC ACTTAATATAAATAG TERM 2985 2996248 - 2996267 + r 84 -7.8 -4.72486 | opp_overlap 2996249, overlap 2996249 TTTTGAACAAAAAAA ATCGAGGC ATTT GCCTCGAC TTTTTAAGATTTATG TERM 2986 2996249 - 2996266 + r 85 -11.3 -3.42407 | opp_overlap 2996249, overlap 2996248 TTTGAACAAAAAAAA TCGAGGC ATTT GCCTCGA CTTTTTAAGATTTAT TERM 2987 2996266 - 2996249 - R 100 -11.3 -6.09888 | opp_overlap 2996248 2996249 TTTGAACAAAAAAAA TCGAGGC ATTT GCCTCGA CTTTTTAAGATTTAT Ssed_2470 2998147 - 2996285 - | hypothetical protein TERM 2988 2998033 - 2998049 + g 75 -3.7 -5.01811 | opp_overlap 2998035, overlap 2998035 CCAGCGTGCCGTTAA GATCGAA ATC TTCGATA TTTTTAATTTCATAG TERM 2989 2998180 - 2998194 + r 73 -8.6 -3.65522 | TTATTTTTAGTCTTA CTTGAG CGA CTCAAG TTCTTCCCATCGCTC Ssed_2471 3000093 - 2998177 - | ABC transporter ATPase component Ssed_2472 3000334 - 3000095 - | glutaredoxin 2 Ssed_2473 3002459 - 3000324 - | 23S rRNA m(2)G2445 methyltransferase Ssed_2474 3004417 - 3003884 - | hypothetical protein TERM 2990 3004560 - 3004578 + r 100 -10.4 -5.36441 | opp_overlap 3004560 CGCGCGATCAAAAAA TAGATCCT AAA AGGATCTA TTTTTTATCTAGCCC TERM 2991 3004578 - 3004560 - R 93 -10.4 -5.14563 | opp_overlap 3004560 CGCGCGATCAAAAAA TAGATCCT AAA AGGATCTA TTTTTTATCTAGCCC Ssed_2475 3005602 - 3004583 - | dihydroorotate dehydrogenase 2 TERM 2992 3005623 - 3005646 + r 77 -8 -4.15849 | opp_overlap 3005625, overlap 3005618 3005625 CTCCTAGACCGAAAA AAGCCCCGGC ATTT GCCAGGGCTA TTTAATTATTATTGT TERM 2993 3005625 - 3005644 + r 83 -10.6 -3.65467 | opp_overlap 3005625, overlap 3005623 3005618 CCTAGACCGAAAAAA GCCCCGGC ATTT GCCAGGGC TATTTAATTATTATT TERM 2994 3005644 - 3005625 - R 100 -12.8 -5.1287 | opp_overlap 3005623 3005618 3005625 CCTAGACCGAAAAAA GCCCCGGC ATTT GCCAGGGC TATTTAATTATTATT Ssed_2476 3010506 - 3005662 - | NAD-glutamate dehydrogenase TERM 2995 3007595 - 3007577 - G 81 -6 -4.84527 | GCCAGACAGGAAAAA TCGGTTGT CTG ACAATCGA TACCTATCTCACGGA TERM 2996 3008993 - 3009009 + g 83 -9.5 -4.1891 | TCACCCTGAGCACTA CTCAATG CAT CATTGAG TTTATCTTCCCAAGA TERM 2997 3009436 - 3009453 + g 73 -5.5 -4.62069 | opp_overlap 3009428, overlap 3009439 TGTCAAACCGGAGCG GTCCAGC ACTC GCTGTAC TTTTTCGGCTAACAG TERM 2998 3010764 - 3010749 - R 100 -10.4 -5.46657 | opp_overlap 3010749 CAGGGTAATAAAAAA GGGAGC CGAA GCTCCC TCTATCCCTATTCTA TERM 2999 3010749 - 3010764 + r 75 -10.4 -2.95894 | opp_overlap 3010749 CAGGGTAATAAAAAA GGGAGC CGAA GCTCCC TCTATCCCTATTCTA Ssed_2477 3013090 - 3010772 - | hypothetical protein TERM 3000 3011783 - 3011754 - G 75 -5.7 -4.50058 | gap 1, overlap 3011759 TAGCGAGAATCAAAA TGAAGTGCA-GGCG CGC CGCCTTGCAGGTCA CCCACTTTCATCAGG TERM 3001 3012395 - 3012364 - G 76 -11 -3.19304 | gap 1, overlap 3012362 3012367 TTGAAAACAGATAGA CCATGATAGCGGTCA CTA TGATCGCTATCA-GG AAAAACAGCACGACC TERM 3002 3012393 - 3012367 - G 80 -12.4 -2.77729 | overlap 3012364 3012362 AAAACAGATAGACCA TGATAGCGGTCA CTA TGATCGCTATCA GGAAAAACAGCACGA Ssed_2478 3014132 - 3013107 - | BNR repeat-containing protein TERM 3003 3014175 - 3014155 - R 75 -10.4 -3.10493 | opp_overlap 3014155, overlap 3014149 TCCTTAAGAGATAGA GGGGCACC CTATC GATGCCCC TTTTGTATCGGAGGA TERM 3004 3014155 - 3014175 + r 82 -8.2 -4.52589 | opp_overlap 3014149 3014155 TCCTTAAGAGATAGA GGGGCACC CTATC GATGCCCC TTTTGTATCGGAGGA Ssed_2479 3015555 - 3014191 - | hypothetical protein TERM 3005 3015398 - 3015365 - G 75 -10.3 -3.28791 | overlap 3015384 ATCCCCTTCTCATAA CCTGCAATGGCGGAA GTGA TCCCACCATCCCAGG CAGGAATCGAACCAT Ssed_2480 3017634 - 3015574 - | hypothetical protein Ssed_2481 3018177 - 3017962 - | hypothetical protein TERM 3006 3018269 - 3018232 - R 85 -8.5 -4.33248 | opp_overlap 3018233, overlap 3018233 GAAGGTTACAACAAA CTGATGACTCCCCAC TTAGGACT GCAGGGAGTCATCAT CGATTAACGTATGTT TERM 3007 3018268 - 3018233 - R 83 -12 -3.19226 | opp_overlap 3018233, overlap 3018232 AAGGTTACAACAAAC TGATGACTCCCCAC TTAGGACT GCAGGGAGTCATCA TCGATTAACGTATGT Ssed_2482 3020850 - 3018283 - | aminopeptidase N TERM 3008 3018975 - 3018956 - G 90 -9.2 -4.5442 | overlap 3018958 TCTTCAACCACAAAA GACCTGGC AGTC GCCAGGGC ATCGAGATCGACAGT TERM 3009 3018973 - 3018958 - G 82 -10.4 -3.8823 | overlap 3018956 TTCAACCACAAAAGA CCTGGC AGTC GCCAGG GCATCGAGATCGACA TERM 3010 3019793 - 3019807 + g 80 -4.2 -5.27923 | ATGGGTCCTGAATCT TCGGCG AAC TGCTGA TTTTTTATCACCTTA TERM 3011 3020930 - 3020956 + r 93 -13.8 -2.98524 | opp_overlap 3020936, overlap 3020936 GATGTAACAGATATG AAAAAACGCGCC ATT GGCGCGTTTTTA ATTATTTAACTCGTT TERM 3012 3020950 - 3020936 - R 100 -12.8 -5.25893 | opp_overlap 3020930 3020936 ACAGATATGAAAAAA CGCGCC ATT GGCGCG TTTTTAATTATTTAA TERM 3013 3020936 - 3020950 + r 100 -12.8 -5.04356 | opp_overlap 3020936, overlap 3020930 ACAGATATGAAAAAA CGCGCC ATT GGCGCG TTTTTAATTATTTAA Ssed_2483 3023044 - 3020972 - | carboxy-terminal protease TERM 3014 3021201 - 3021225 + g 80 -4.2 -5.19212 | opp_overlap 3021201 TCGCGCTCTGCAATA CGTTCACTCT CAACA AGAGAGACCG TTTTTTCATCATGAT TERM 3015 3022895 - 3022921 + g 71 -7.3 -3.97834 | opp_overlap 3022895 3022897 3022898, overlap 3022898 GTGAGAGCGAGTAAA GAGGCCAGTAA CGCGC TTACTGGCTAC TTTATGCTGCGGTTC Ssed_2484 3023727 - 3023074 - | putative solute/DNA competence effector Ssed_2485 3024462 - 3023983 - | putative GAF sensor protein TERM 3016 3024494 - 3024508 + r 93 -7.1 -5.40072 | TTTATTTTTTCGATT CGGCT TTATT AGCCG TTTTTTTAGGCGAAG Ssed_2486 3024764 - 3024480 - | YebG family protein Ssed_2487 3024982 - 3025608 + | paraquat-inducible protein A TERM 3017 3026126 - 3026136 + G 71 -6.8 -4.30416 | opp_overlap 3026117 3026118 GCTAAACCCGCACCG GCAG CCA CTGC TTTTGCCTTGGTCAT Ssed_2488 3025601 - 3026242 + | paraquat-inducible protein A Ssed_2489 3026220 - 3028844 + | virulence factor MCE-like protein TERM 3018 3028860 - 3028900 + F 73 -7 -4.27861 | overlap 3028865 TTTCCGCGTAGTGCT TTACACCTAAGCCAGAAT CGTCA GTTCTGGTTTAGGTTCAA TTTTAGCTATATGTT TERM 3019 3028865 - 3028895 + F 85 -11.3 -3.38683 | overlap 3028860 GCGTAGTGCTTTACA CCTAAGCCAGAAT CGTCA GTTCTGGTTTAGG TTCAATTTTAGCTAT Ssed_2490 3028976 - 3030001 + | diguanylate cyclase Ssed_2491 3030702 - 3030082 - | sortase family protein Ssed_2492 3033011 - 3030699 - | vault protein inter-alpha-trypsin subunit TERM 3020 3031092 - 3031105 + g 95 -3.7 -5.88565 | opp_overlap 3031091 GGCCCAAATAAGATC CAGCC CAGC GGCAG TTTTTTTATTATCGA TERM 3021 3031162 - 3031147 - G 72 -10.4 -2.93073 | overlap 3031144 TCTTGCCAATAACGA CCGGCT ATTG AGCCGG AAATCACCAATTTAT TERM 3022 3031185 - 3031207 + g 77 -4.1 -5.06414 | gap 1, overlap 3031180 CAATTTATCTTGCGA TGCCG-CGTA CTTG TCCGACGGCA TTTTTATTGCCACCA TERM 3023 3031972 - 3031982 + g 71 -6.8 -4.29325 | GGTTTTGCATTTAGT TCCG GAT CGGA TTTTACATGTTGCTC TERM 3024 3032956 - 3032978 + g 72 -10.5 -3.09516 | opp_overlap 3032948 3032952, overlap 3032959 AGAAGGAGGAAGCCG AGAGCCCCC CGGTT GGGGGCTCC TTGACTGGTAGCCGA TERM 3025 3032959 - 3032975 + g 74 -10.8 -2.76263 | opp_overlap 3032948 3032952, overlap 3032956 AGGAGGAAGCCGAGA GCCCCC CGGTT GGGGGC TCCTTGACTGGTAGC Ssed_2493 3033778 - 3033041 - | OmpA/MotB domain-containing protein Ssed_2494 3034098 - 3034796 + | two component transcriptional regulator Ssed_2495 3034873 - 3037089 + | integral membrane sensor signal transduction histidine kinase Ssed_2496 3037161 - 3038396 + | cystathionine beta-lyase TERM 3026 3038462 - 3038448 - T 81 -5.6 -5.14563 | opp_overlap 3038449, overlap 3038449 TTCTGTATCAAAAAA CCGCCT GAC AGGCGT TTTTTTTACGAATGA TERM 3027 3038461 - 3038449 - T 76 -9.1 -3.68256 | opp_overlap 3038449, overlap 3038448 TCTGTATCAAAAAAC CGCCT GAC AGGCG TTTTTTTTACGAATG TERM 3028 3038449 - 3038461 + T 100 -9.1 -5.76949 | opp_overlap 3038449 3038448 TCTGTATCAAAAAAC CGCCT GAC AGGCG TTTTTTTTACGAATG Ssed_2497 3039206 - 3038511 - | peptidase S51, dipeptidase E TERM 3029 3039688 - 3039675 - g 79 -3.7 -5.33985 | opp_overlap 3039674 3039675 3039683 3039683 TTGAAAAAAAATAAA GTGCC CGGT GGCGC CTTCGTCATTATTGA Ssed_2498 3039534 - 3040691 + | beta-lactamase TERM 3030 3041195 - 3041183 - f 70 -2.7 -5.0133 | overlap 3041184 CATGGTTGCAAAAAA CCAAT CAA ATTGA TATCGTAACATACAT Ssed_2499 3041375 - 3042580 + | hypothetical protein Ssed_2500 3042580 - 3042975 + | hypothetical protein Ssed_2501 3043061 - 3043522 + | hypothetical protein TERM 3031 3044148 - 3044132 - g 78 -7.9 -4.4195 | opp_overlap 3044141 3044144, overlap 3044133 ATAGATTCGATAAAA GCCGCCA TTG TGGCGGG CGCCGATGCTATCTA TERM 3032 3044147 - 3044133 - g 79 -11.4 -3.24447 | opp_overlap 3044141 3044144, overlap 3044132 TAGATTCGATAAAAG CCGCCA TTG TGGCGG GCGCCGATGCTATCT Ssed_2502 3044078 - 3046318 + | collagenase-like protein TERM 3033 3046717 - 3046703 - g 71 -8.6 -3.68569 | opp_overlap 3046702 GCACTGACTCAAGAA GGCAAA GAC TTTGCC GATTATTGTGACCAG Ssed_2503 3046505 - 3047452 + | LysR family transcriptional regulator Ssed_2504 3047836 - 3048615 + | uridine phosphorylase TERM 3034 3048652 - 3048662 + F 81 -6.8 -4.83169 | opp_overlap 3048651 3048652, overlap 3048641 TTATGCCATATAAAC GGCT TAT AGCC TTTTTATAAAAGCAT Ssed_2505 3048732 - 3048992 + | hypothetical protein Ssed_2506 3049254 - 3049460 + | hypothetical protein Ssed_2507 3049490 - 3049684 + | hypothetical protein Ssed_2508 3050810 - 3049752 - | peptidase T2, asparaginase 2 TERM 3035 3050118 - 3050132 + g 79 -3.4 -5.24129 | overlap 3050117 ACCTGTAGAGGTCCC GGCCGC TAG GTTGCC TTTTTTATCCAGAGC TERM 3036 3050215 - 3050235 + g 78 -8.9 -4.11394 | opp_overlap 3050217 GGAACACCGTTTAAT GACGCCTGA TAA TCGGGCGAC TTTTCCGACTCGGCT TERM 3037 3050239 - 3050249 + g 70 -2.4 -4.84642 | TAATCGGGCGACTTT TCCG ACT CGGC TTTTCTTAATTTCAC TERM 3038 3050810 - 3050824 + H 81 -2.8 -5.64421 | TCGATTTATTTTTCA CAAAAG GGT CCTTTG TTTTTTATTTGCACT TERM 3039 3051654 - 3051664 + H 71 -6.8 -4.06687 | CTGAATCGGGAACTG CTGG ATA CCAG TTATTTCTCCAACAT TERM 3040 3052010 - 3052020 + H 71 -6.8 -4.06687 | CTGAATCGGGAACTG CTGG ATA CCAG TTATTTCTCCAACAT TERM 3041 3052330 - 3052320 - H 73 -6.8 -4.30416 | ATGACCAACTGAAAA TCCG GGT CGGA ATGCTCAGGGATAAA TERM 3042 3054302 - 3054286 - g 73 -2.1 -5.0133 | overlap 3054287 3054289 CAGGGCTTTAAAAAA CTAGCCG TGA CGGCGAC TGGTAAGGGTCATAT Ssed_2511 3053146 - 3057105 + | hypothetical protein TERM 3043 3057135 - 3057117 - T 100 -13.2 -5.76633 | opp_overlap 3057117 CTAGACACAAAAAAA CCGCTTCA TGA TGAAGCGG TTTTTAGTTGTTACA TERM 3044 3057117 - 3057135 + T 100 -13.2 -4.99435 | opp_overlap 3057117 CTAGACACAAAAAAA CCGCTTCA TGA TGAAGCGG TTTTTAGTTGTTACA Ssed_2512 3057925 - 3057176 - | fatty acid metabolism regulator TERM 3045 3057262 - 3057272 + g 73 -3.2 -4.91109 | GCATTAAGCCAGGGA TCGC ATT GTGA TTTTTCTCATGAGCA Ssed_2513 3058238 - 3059821 + | sodium/proton antiporter TERM 3046 3059905 - 3059892 - f 93 -9.5 -5.08088 | opp_overlap 3059892 AAGTCTTAACAAAAA CGCCC TTTC GGGCG TTTTTTATTATATCT TERM 3047 3059892 - 3059905 + F 100 -9.5 -5.62045 | opp_overlap 3059892 AAGTCTTAACAAAAA CGCCC TTTC GGGCG TTTTTTATTATATCT TERM 3048 3060127 - 3060141 + G 73 -2.1 -5.1361 | ACTTATTGGCTTAGT CGGTT ATAAG AATCG TTTTTTGCGCTTTAT Ssed_2514 3059921 - 3060454 + | disulphide bond formation protein DsbB TERM 3049 3060502 - 3060465 - T 100 -11.3 -6.11229 | opp_overlap 3060469, overlap 3060467 3060468 3060469 AGTAAAACAAAAAAA TAGCTGTCTCCATGGCC CAGT GGCCATGGAGACATTTT CTTACTGCATAGACT TERM 3050 3060500 - 3060467 - T 100 -13.9 -4.67109 | opp_overlap 3060469, overlap 3060465 3060468 3060469 TAAAACAAAAAAATA GCTGTCTCCATGGCC CAGT GGCCATGGAGACATT TTCTTACTGCATAGA TERM 3051 3060499 - 3060468 - T 100 -17.4 -3.36605 | opp_overlap 3060469, overlap 3060467 3060465 3060469 AAAACAAAAAAATAG CTGTCTCCATGGCC CAGT GGCCATGGAGACAT TTTCTTACTGCATAG TERM 3052 3060498 - 3060469 - T 100 -20.9 -2.58303 | opp_overlap 3060469, overlap 3060468 3060467 3060465 AAACAAAAAAATAGC TGTCTCCATGGCC CAGT GGCCATGGAGACA TTTTCTTACTGCATA TERM 3053 3060469 - 3060498 + T 100 -20.9 -4.72497 | opp_overlap 3060468 3060467 3060465 3060469 AAACAAAAAAATAGC TGTCTCCATGGCC CAGT GGCCATGGAGACA TTTTCTTACTGCATA Ssed_2515 3061479 - 3060589 - | hypothetical protein Ssed_2516 3062121 - 3061681 - | hypothetical protein TERM 3054 3062156 - 3062141 - R 80 -4.6 -5.28826 | AAATTCTATAAAAAA GCCCAC TTTC GCAGGC CATTTTACACTATTT Ssed_2517 3063167 - 3062166 - | lytic murein transglycosylase Ssed_2518 3063487 - 3063206 - | hypothetical protein Ssed_2519 3063610 - 3064275 + | septum site-determining protein MinC Ssed_2520 3064301 - 3065110 + | septum site-determining protein MinD Ssed_2521 3065113 - 3065373 + | cell division topological specificity factor MinE TERM 3055 3065406 - 3065431 + T 90 -8.3 -5.01422 | opp_overlap 3065406 CTAGCAATAAAAAAA CCCGCATTTAT ATTG ATAAGCGCGGG TTTATTTTTATCTGA TERM 3056 3065431 - 3065406 - T 100 -8.3 -5.84381 | opp_overlap 3065406 CTAGCAATAAAAAAA CCCGCATTTAT ATTG ATAAGCGCGGG TTTATTTTTATCTGA TERM 3057 3065734 - 3065696 - T 80 -11.2 -2.80816 | opp_overlap 3065702 3065704 TGCTGAGCGATCACA TCTTTATACCGATTGGTA TTA TACCAATCGGTATTACAA AGCCAATTCGGCCAG TERM 3058 3065704 - 3065726 + T 100 -15 -3.01791 | opp_overlap 3065696, overlap 3065702 GATCACATCTTTATA CCGATTGGTA TTA TACCAATCGG TATTACAAAGCCAAT Ssed_2522 3066838 - 3065729 - | ribonuclease D TERM 3059 3066893 - 3066877 - R 100 -13.7 -5.54907 | GCTACAAAATAAAAA GCCGGCT GAT AGCCGGC TAAGAAAGTGAGATA Ssed_2523 3068611 - 3066938 - | long-chain-fatty-acid--CoA ligase TERM 3060 3067279 - 3067268 - G 71 -3 -4.93365 | overlap 3067261 GTCGACAATGAAAAA GAAA CCAT TTTC ATCCATATAGCCAAT TERM 3061 3068378 - 3068392 + g 85 -11.4 -3.68619 | overlap 3068387 GTTAGGCATCATGAT GGCGAC TCT GTCGCC TTTGACTAACTTAAG Ssed_2524 3069685 - 3068789 - | alpha/beta hydrolase fold Ssed_2525 3070537 - 3069707 - | hypothetical protein Ssed_2526 3071338 - 3070628 - | hypothetical protein Ssed_2527 3071648 - 3071331 - | hypothetical protein Ssed_2528 3072557 - 3071838 - | hypothetical protein Ssed_2529 3073470 - 3072772 - | GMP synthase glutamine amidotransferase subunit Ssed_2530 3074668 - 3073502 - | alcohol dehydrogenase TERM 3062 3073916 - 3073886 - G 83 -11.8 -3.53224 | opp_overlap 3073900 GAGTCCCCGCTGAAA GCTGGTTGCCCCCA TGC TGGACGCCACCAGC ATCTGTGTTCGCGCC Ssed_2531 3076192 - 3074714 - | NAD-dependent aldehyde dehydrogenase Ssed_2532 3077613 - 3076246 - | hypothetical protein Ssed_2533 3078910 - 3078437 - | hypothetical protein Ssed_2534 3079820 - 3078951 - | NAD-dependent epimerase/dehydratase Ssed_2535 3081789 - 3079852 - | helicase C2 TERM 3063 3082015 - 3081992 - R 83 -11.8 -3.20164 | GCAGAGGTAATCGAA TTGAGCCCAT AGTA ATGGGCCCAA ACAATAATATGAGGC Ssed_2536 3082683 - 3082036 - | MukF protein TERM 3064 3082523 - 3082505 - G 82 -12.4 -3.15574 | overlap 3082503 GCAAGGTTAGTAATA GGCGCTCC TAC AGAGCGCC CCGTAATATGACCAT TERM 3065 3082727 - 3082705 - R 77 -4.8 -5.00616 | opp_overlap 3082705 TCTCCCTTCAAAAAA CGCCGC TCAGTAATATC GCGGCG TTTCAATCGATACTC Ssed_2537 3084015 - 3082741 - | hypothetical protein Ssed_2538 3084445 - 3084065 - | endoribonuclease L-PSP, putative TERM 3066 3085432 - 3085420 - g 72 -10.5 -2.97408 | overlap 3085419 GTCCAGTGAAAGAAT GGCCG CGA CGGCC GTAAAGACACAAGAA Ssed_2539 3084740 - 3085492 + | branched-chain amino acid transport protein AzlC Ssed_2540 3085497 - 3085841 + | hypothetical protein TERM 3067 3085977 - 3085992 + F 89 -5.4 -5.36965 | opp_overlap 3085977 CTTACTTTTTAGATA TTAGCC AACA GGCTGA TTTTTTCTGATATTA TERM 3068 3086079 - 3086109 + F 79 -9.1 -3.90291 | gap 1, overlap 3086096 CATCACCATATGCGG TAG-CCTTCGGAAG CTCA CTGCCGAAGGACTA TTTCCTTCCGGCGGT TERM 3069 3086096 - 3086123 + F 70 -8.5 -3.34522 | gap 1, overlap 3086079 GCCTTCGGAAGCTCA CTGCC-GAAGGA CTATT TCCTTCCGGCGG TTGATTCAAGAATAT TERM 3070 3086166 - 3086145 - f 84 -10.1 -3.85878 | opp_overlap 3086145 CAAGAATATCAAGAA CCCCTGGAA GGAA TTCCGGGGG TTTTTACGTTTTAGA TERM 3071 3086145 - 3086166 + F 100 -12.3 -4.87318 | opp_overlap 3086145 CAAGAATATCAAGAA CCCCTGGAA GGAA TTCCGGGGG TTTTTACGTTTTAGA Ssed_2541 3086228 - 3087127 + | ATP phosphoribosyltransferase Ssed_2542 3087132 - 3088451 + | histidinol dehydrogenase Ssed_2543 3088453 - 3089523 + | histidinol-phosphate aminotransferase TERM 3072 3090576 - 3090550 - g 73 -8.1 -4.13767 | gap 1, opp_overlap 3090575 CCTTGCACCTCAAAA CCTTG-GGCGAT AACG ATCACCACAAGG TTGAAAGCCTCTATA Ssed_2544 3089601 - 3090668 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase Ssed_2545 3090665 - 3091321 + | imidazole glycerol phosphate synthase subunit HisH Ssed_2546 3091318 - 3092058 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Ssed_2547 3092126 - 3092899 + | imidazole glycerol phosphate synthase subunit HisF Ssed_2548 3092975 - 3093604 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 3073 3093668 - 3093652 - f 93 -12.3 -3.89348 | opp_overlap 3093652 AAGGTTACAGAATAA GAGCACC TCG GGTGCTC TTTTTATATCCTTCA TERM 3074 3093652 - 3093668 + F 100 -12.3 -5.04175 | opp_overlap 3093652 AAGGTTACAGAATAA GAGCACC TCG GGTGCTC TTTTTATATCCTTCA TERM 3075 3093833 - 3093821 - f 70 -3.3 -4.91429 | AAAGCTGAAACAAAA GCAGT AAC ACAGC CGTAAAAGGAATTGG Ssed_2549 3093879 - 3094658 + | amino acid ABC transporter Ssed_2550 3094808 - 3095020 + | hypothetical protein Ssed_2551 3095924 - 3095106 - | extracellular solute-binding protein Ssed_2552 3096246 - 3097352 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3076 3097425 - 3097460 + T 100 -14.2 -3.36273 | opp_overlap 3097425, overlap 3097428 TGCTCTAAAGCAAAA TAAGCCGCAACTTCAT GCAA GTGAAATTGCGGCTTA TTCCTCTTGCCAAAG TERM 3077 3097460 - 3097425 - T 100 -15.7 -4.54727 | opp_overlap 3097425 3097428 TGCTCTAAAGCAAAA TAAGCCGCAACTTCA TGCAAG TGAAATTGCGGCTTA TTCCTCTTGCCAAAG TERM 3078 3097428 - 3097457 + T 90 -11.5 -3.82084 | opp_overlap 3097425, overlap 3097425 TCTAAAGCAAAATAA GCCGCAACTTCAT GCAA GTGAAATTGCGGC TTATTCCTCTTGCCA Ssed_2553 3098027 - 3097458 - | hypothetical protein Ssed_2554 3102111 - 3098020 - | proprotein convertase, P Ssed_2555 3103693 - 3102098 - | hypothetical protein TERM 3079 3102925 - 3102909 - G 83 -8.7 -4.64676 | CCATGCTCAATAAAA GATGGAG TTC CCCCATC GATGCAGCTATCAAT Ssed_2556 3103741 - 3104079 + | hypothetical protein TERM 3080 3104203 - 3104152 - T 91 -10.5 -4.54727 | gap 2, opp_overlap 3104164 3104197, overlap 3104164 TGTTCTAAAGCAAAA TAATGATAATAAGCCGCAGCGTCAT GCAA ATGAAGCTGCGGCTTTTT-TC-TTA CCAAAGAGATTCTGG TERM 3081 3104193 - 3104164 - T 100 -16.5 -3.93867 | opp_overlap 3104164, overlap 3104152 AAATAATGATAATAA GCCGCAGCGTCAT GCAA ATGAAGCTGCGGC TTTTTTCTTACCAAA TERM 3082 3104164 - 3104193 + T 100 -16.5 -5.4505 | opp_overlap 3104152 3104164 AAATAATGATAATAA GCCGCAGCGTCAT GCAA ATGAAGCTGCGGC TTTTTTCTTACCAAA TERM 3083 3104343 - 3104359 + T 89 -9.5 -4.16305 | TACAGGCAAGTTTGT TGAAGGT TGT ACCTTCA TTGTTATTTATCGCT TERM 3084 3104449 - 3104428 - T 71 -5.1 -4.63218 | opp_overlap 3104416 TTTCTTCGAATAAAA GTTTCGAAG TTTG CTCCGATAC CTATACGTCTTGGAA TERM 3085 3104505 - 3104477 - T 89 -11.9 -3.58269 | opp_overlap 3104477 GAACTTATGTGTAAA TGCCGAAAATG TGGGGGG CATTTTCGGCA TTATTTATATGCTTA TERM 3086 3104477 - 3104505 + T 100 -12.6 -4.18421 | opp_overlap 3104477 GAACTTATGTGTAAA TGCCGAAAATGT GGGGG GCATTTTCGGCA TTATTTATATGCTTA Ssed_2557 3105756 - 3104548 - | porin TERM 3087 3106533 - 3106548 + H 72 -3.2 -5.06414 | overlap 3106535 CATTATGTTGGCGTA TTTGCC CATT GGCACA TTTTTCTTGAACAAG TERM 3088 3107308 - 3107254 - H 72 -9.2 -3.33151 | opp_overlap 3107253 3107258, overlap 3107252 3107262 GCCTCTAAATTAAGA TTCACCAAGGCTGTCATGCCATTTGC TGA GCAAATCGCCCGCCAGCCATGGTTCA CTTATTAGAGGGGCG TERM 3089 3107258 - 3107304 + H 86 -12.2 -3.28745 | opp_overlap 3107254 3107252 3107262, overlap 3107253 CTAAATTAAGATTCA CCAAGGCTGTCATGCCATTTGC TGA GCAAATCGCCCGCCAGCCATGG TTCACTTATTAGAGG TERM 3090 3107300 - 3107262 - H 85 -12.4 -3.22448 | opp_overlap 3107258 3107253, overlap 3107254 3107252 ATTAAGATTCACCAA GGCTGTCATGCCATTTGC TGA GCAAATCGCCCGCCAGCC ATGGTTCACTTATTA Ssed_2558 3107345 - 3107677 + | hypothetical protein Ssed_2559 3107652 - 3108119 + | hypothetical protein Ssed_2560 3108240 - 3108515 + | hypothetical protein TERM 3091 3108574 - 3108531 - f 70 -5.4 -4.32046 | gap 1, opp_overlap 3108531 TTTCTAAAAATCAAA GTACCGGAACAAATACTCG CTATTCT CTCGCATTTG-TCCGGTAC TTTTGGCGTTACGGT TERM 3092 3109122 - 3109112 - f 74 -4.6 -4.86001 | AGGAGGCTAGAAAAA GCGA AGG CCGC ATTGTAATGATGCGG Ssed_2561 3109232 - 3110704 + | RNA-directed DNA polymerase TERM 3093 3110868 - 3110842 - T 87 -5.1 -5.48787 | gap 1, overlap 3110835 AGAACACATAAAAAA GCCGC-ACCCCC TGAA GGGAATTGCGAC TTTGTTTACTTTGTT Ssed_2562 3111825 - 3110980 - | universal stress protein Ssed_2563 3113326 - 3111839 - | sulfate transporter TERM 3094 3113472 - 3113458 - R 73 -7.2 -3.98291 | AACAAGCGCAAAGAA TAAGCA TGG TGCTTA GGTAGCAATGAAAGC Ssed_2564 3114519 - 3113776 - | pirin domain-containing protein TERM 3095 3113981 - 3113995 + g 73 -10 -3.27109 | opp_overlap 3113980 3113981, overlap 3113979 GGCGCCAGAATTAAT TGCGAC AGT GTCGCA TCTTGCTTCAGTTCG TERM 3096 3114102 - 3114118 + g 88 -2.2 -5.85737 | overlap 3114114 CAATTGTGGTTAGCC CTTCGG CCTGT CCAAAG TTTTTTTGTTGGTAT Ssed_2565 3115053 - 3114610 - | DoxX family protein Ssed_2566 3115212 - 3116105 + | transcriptional regulator, LysR family protein Ssed_2567 3116986 - 3116246 - | hypothetical protein TERM 3097 3117378 - 3117343 - R 90 -13.4 -2.62396 | opp_overlap 3117340 TATCTTTTGATATTA GCCGGTGTGGCCAAAT TTAA ATTTAGCCACACCAGA AGCATACCTTAATTA TERM 3098 3117387 - 3117399 + r 72 -3.5 -5.0925 | CACCAGAAGCATACC TTAAT TAT ATTAA TTTTTGATTTTCAGG Ssed_2568 3119896 - 3117755 - | aldehyde ferredoxin oxidoreductase TERM 3099 3119864 - 3119881 + g 71 -2.7 -4.88217 | opp_overlap 3119857, overlap 3119866 TAAATCAATGTGCAG GATTTTG CCTG CAAAACC TTTTAATTTTTTCAT Ssed_2569 3120591 - 3119905 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_2570 3121475 - 3120588 - | hypothetical protein Ssed_2571 3122092 - 3123057 + | transcriptional regulator-like protein Ssed_2572 3123642 - 3123959 + | hypothetical protein Ssed_2573 3124207 - 3124656 + | host cell attachment-required protein TERM 3100 3124719 - 3124742 + F 87 -12.5 -3.31144 | opp_overlap 3124723 GACATATTTATGTGA GACAGGCCA ATTTAG TGGCCTGTC TTATGAGCATAGGCA Ssed_2574 3124800 - 3125216 + | hypothetical protein Ssed_2575 3125409 - 3126152 + | hypothetical protein Ssed_2576 3126222 - 3126956 + | hypothetical protein TERM 3101 3127292 - 3127248 - f 70 -9.4 -2.62389 | opp_overlap 3127287, overlap 3127247 3127259 3127287 CAATGTATTGACAAG GGTAGAATGAACGCTCTACC ATATG AGTAGAACAAACATTCTACC TATAGGTTGATTATG Ssed_2577 3127305 - 3127823 + | hypothetical protein TERM 3102 3127998 - 3127981 - g 73 -9.9 -3.29626 | CAATACCGACATCAA TACCAGG ACAG CCTGGTA CTCGAAAAACGATGG TERM 3103 3128480 - 3128467 - g 77 -4.5 -4.87291 | CAGCCCAAGCAAAAA CCAAC AACT GCTGG AACTGGGAGCAGACC Ssed_2578 3127820 - 3128878 + | alcohol dehydrogenase Ssed_2579 3129473 - 3130861 + | hypothetical protein TERM 3104 3130967 - 3130992 + G 78 -5.5 -4.89477 | gap 1 AGATTACAACAACGA GTACCAAGTGCT GCA AG-GCTTGGTGC TTTTGTTCTTAAAGA Ssed_2580 3130913 - 3131173 + | hypothetical protein Ssed_2581 3131252 - 3131404 + | hypothetical protein Ssed_2582 3131873 - 3132676 + | hypothetical protein TERM 3105 3132771 - 3132757 - f 82 -8.5 -4.30844 | opp_overlap 3132757 3132756 AGCCGACTATTAAAA GCCCC TGAAC GGGGC ATTATATTTCAAGGA Ssed_2583 3132798 - 3133085 + | hypothetical protein TERM 3106 3133234 - 3133270 + T 100 -15.3 -3.34344 | opp_overlap 3133246, overlap 3133235 3133246 AGTGCTCATAGCCGG GTCCGTTGAAAACCCTA AGA TTGGGTTTTCAACGGAG TTAATTCCGGGATCA TERM 3107 3133235 - 3133269 + T 100 -18.8 -2.60392 | opp_overlap 3133246, overlap 3133234 3133246 GTGCTCATAGCCGGG TCCGTTGAAAACCCTA AGA TTGGGTTTTCAACGGA GTTAATTCCGGGATC Ssed_2584 3134052 - 3133315 - | ketoreductase Ssed_2585 3134861 - 3134292 - | NAD(P)H oxidoreductase-like protein TERM 3108 3135146 - 3135133 - g 80 -3.8 -5.30155 | opp_overlap 3135143, overlap 3135134 3135143 CCATCAATTAAAAAA GCTG GAAGAA CAGC TCGGCACCGCGCTGT Ssed_2586 3135014 - 3135904 + | carbonate dehydratase TERM 3109 3136112 - 3136101 - g 70 -2.2 -4.99134 | ACTGCAAATGAAAAA CTAG TTCT CCAG TGGTTTGGCAACTAG Ssed_2587 3135894 - 3136127 + | hypothetical protein TERM 3110 3136987 - 3137012 + G 73 -7.7 -4.00868 | gap 1 CCTGAGTTTACCGCC GATACC-GATGG CGA CTATCAGGTATC TTTAGTTGTCAGTGA TERM 3111 3138142 - 3138128 - g 73 -3.4 -4.92757 | overlap 3138129 GCAGTAACAATAAAA CGGCGG TCT CCTCCA CTCCGGGGGCAGGAT TERM 3112 3138476 - 3138461 - g 83 -11.8 -3.53224 | opp_overlap 3138450 3138449 3138461 CATTTTCGGGGCAAA CCGGCG GCAG CGCCGG TGTCATCGAGGTTTT TERM 3113 3138461 - 3138476 + G 76 -11.8 -2.80575 | opp_overlap 3138461, overlap 3138450 3138449 CATTTTCGGGGCAAA CCGGCG GCAG CGCCGG TGTCATCGAGGTTTT Ssed_2588 3136345 - 3139413 + | hypothetical protein TERM 3114 3140239 - 3140258 + G 71 -2.8 -4.86621 | gap 1 TAATTTCGGCGCTTA TCG-CCCTG ATC CAGAGCCGA TTTTTCGTTAAACCT Ssed_2589 3139584 - 3141083 + | sensor histidine kinase TERM 3115 3141802 - 3141779 - g 88 -8.2 -4.68384 | overlap 3141801 AGGTACGTAAGAAAA TCGCCTCTAT CGGC ATAGAGGAGA GCGCCGTTCACTCTG Ssed_2590 3141154 - 3141846 + | two component transcriptional regulator Ssed_2591 3142893 - 3141925 - | hypothetical protein TERM 3116 3142550 - 3142540 - G 71 -4 -4.69027 | AAATGCAGCGAAAAA CATA AAA TATG CCTGAACTTTAGCTT Ssed_2592 3144013 - 3143075 - | putative transcriptional regulator Ssed_2593 3144171 - 3144494 + | hypothetical protein Ssed_2594 3144505 - 3144876 + | hypothetical protein TERM 3117 3144938 - 3144908 - T 100 -12.1 -5.52023 | gap 1, opp_overlap 3144908 AGGAGCAATAAAAAA GGTGAG-TTTAAGC CATG GCTTAAATCTCACC TTTCACTTTCACTGA TERM 3118 3144908 - 3144938 + T 91 -12.1 -3.85909 | gap 1, opp_overlap 3144908 AGGAGCAATAAAAAA GGTGAG-TTTAAGC CATG GCTTAAATCTCACC TTTCACTTTCACTGA Ssed_2595 3145931 - 3144996 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 3119 3146151 - 3146115 - R 79 -8.8 -4.08042 | opp_overlap 3146124, overlap 3146125 TTCACTAGAAAAATA TACAGAAAAAGCCACT ACTTG AGTGGCCTTGACTGTA ACTATTTAACGCGAT TERM 3120 3146141 - 3146125 - R 88 -8 -5.1104 | opp_overlap 3146124, overlap 3146115 AAATATACAGAAAAA GCCACT ACTTG AGTGGC CTTGACTGTAACTAT Ssed_2596 3146462 - 3146166 - | integration host factor, alpha subunit Ssed_2597 3148855 - 3146468 - | phenylalanyl-tRNA synthetase subunit beta Ssed_2598 3149854 - 3148871 - | phenylalanyl-tRNA synthetase subunit alpha TERM 3121 3149949 - 3149931 - H 75 -3 -5.30339 | overlap 3149933 ATGAAAATAGAAAAA GACACGAA TTT TACGTGAC ATCCGCCCTTTTGGC Ssed_2599 3150258 - 3151763 + | methyl-accepting chemotaxis sensory transducer Ssed_2600 3151935 - 3154547 + | multi-sensor signal transduction histidine kinase TERM 3122 3154845 - 3154819 - T 80 -11 -3.3344 | opp_overlap 3154819 3154825, overlap 3154825 ATGCAATTGGTATAA TAAAAAGGTGCT TAA AGCACCTTTTTC ATTGCTCTTATACCA TERM 3123 3154819 - 3154845 + T 76 -11 -2.64726 | opp_overlap 3154819 3154825, overlap 3154825 ATGCAATTGGTATAA TAAAAAGGTGCT TAA AGCACCTTTTTC ATTGCTCTTATACCA TERM 3124 3154825 - 3154839 + T 93 -10 -4.92777 | opp_overlap 3154819 3154825, overlap 3154819 TTGGTATAATAAAAA GGTGCT TAA AGCACC TTTTTCATTGCTCTT TERM 3125 3154839 - 3154825 - T 100 -10 -5.18726 | opp_overlap 3154825 3154819, overlap 3154819 TTGGTATAATAAAAA GGTGCT TAA AGCACC TTTTTCATTGCTCTT Ssed_2601 3155741 - 3154872 - | hypothetical protein TERM 3126 3155934 - 3155916 - R 100 -10.3 -5.29782 | opp_overlap 3155915 TATATCCACAAAAAA TGTCGGC ACCAG GCCGACA CTTAACTAACAATTA Ssed_2602 3156392 - 3156009 - | hypothetical protein Ssed_2603 3156709 - 3156422 - | hypothetical protein TERM 3127 3156718 - 3156754 + r 93 -14 -3.14132 | opp_overlap 3156723, overlap 3156721 TCCACATATTCAGGT GAATACTCCTAATGTT AATCC AACATTAGGCGTATTC TTCATAGGGCACAAG TERM 3128 3156721 - 3156751 + r 79 -9.9 -3.71848 | opp_overlap 3156723, overlap 3156718 ACATATTCAGGTGAA TACTCCTAATGTT AATCC AACATTAGGCGTA TTCTTCATAGGGCAC Ssed_2604 3157161 - 3156805 - | hypothetical protein TERM 3129 3157189 - 3157210 + r 70 -9.5 -2.6348 | overlap 3157188 3157191 TCATGTACTCAGTTA GAGCATGGT AGAT ACTATGCTC ATTATCCAGTTTAAA Ssed_2605 3157867 - 3157292 - | YceI family protein Ssed_2606 3158946 - 3158305 - | pyridoxal 5'-phosphate synthase TERM 3130 3158681 - 3158656 - G 76 -9.9 -3.66874 | opp_overlap 3158655 3158659, overlap 3158659 3158663 TGAATGCCACGGAAA CAATAAACTCA CCTT CGAGTTTATTG CTATCTGCTGTGATT TERM 3131 3158999 - 3158979 - R 77 -6.2 -4.52589 | opp_overlap 3158979 3158974 CTTGTTCAGATAAAA GGTGATAC TAACC ATATCACC TTTCGTTGTTTTACT Ssed_2607 3159930 - 3159010 - | agmatinase TERM 3132 3159052 - 3159074 + g 76 -8.5 -4.08279 | gap 1, overlap 3159067 CAACATCTCAAGACC CAGCGTT-GC TCCG GCTAACGCTG TTATTTCTGCGCTGT Ssed_2608 3160890 - 3159961 - | adenosylmethionine decarboxylase TERM 3133 3160830 - 3160862 + g 90 -2.6 -5.71712 | opp_overlap 3160832 3160835, overlap 3160831 3160832 3160835 CGCCCAATTGTCGTA AAGAGGGGGTCGTA GAGGA TACGACCACTTCAA TTTTTTTCTCTGAAC TERM 3134 3160910 - 3160930 + r 77 -11.1 -2.9175 | TTGAGTTACCCAGTT GCAGGCCCA TTA TGAGCCTGC TCTAATTACCCTATG Ssed_2609 3162854 - 3160941 - | arginine decarboxylase TERM 3135 3161360 - 3161373 + g 73 -9.5 -3.28791 | opp_overlap 3161351 3161349 3161354 CTAACATGACCGCAC GGCGC TCAG GCGCC TTATCGAGACCAGAT TERM 3136 3163321 - 3163343 + G 76 -7 -4.46112 | CAGCACACTCGAAGT CGTCAAAATC GTT GAATTTGGCG TTTATTTAGATGGAC Ssed_2610 3163286 - 3164119 + | hypothetical protein TERM 3137 3164238 - 3164211 - f 77 -7.8 -4.25848 | opp_overlap 3164211 AAGCTTTGATTAAAA GCATGACTCTGT TATA ACAAAGTTATGC TTTTTTTATGAGTCT TERM 3138 3164211 - 3164238 + F 100 -7.8 -5.65177 | opp_overlap 3164211 AAGCTTTGATTAAAA GCATGACTCTGT TATA ACAAAGTTATGC TTTTTTTATGAGTCT Ssed_2611 3164260 - 3164925 + | hypothetical protein Ssed_2612 3165113 - 3165949 + | hypothetical protein Ssed_2613 3165946 - 3166845 + | ABC transporter-related protein TERM 3139 3166908 - 3166928 + T 100 -14.1 -5.88565 | ACTGCAATCATTTGA GGCATCACA ATC TGTGATGCC TTTTTTTATTCTCGC TERM 3140 3167229 - 3167208 - T 100 -14.5 -5.4492 | opp_overlap 3167201 3167210 TACAGACATAAAAAA GAGCTGCGA TAAA TCGCAGCTC TTAAAAATTCTTTTG TERM 3141 3167210 - 3167227 + T 81 -11.3 -3.08349 | opp_overlap 3167208, overlap 3167201 CAGACATAAAAAAGA GCTGCGA TAAA TCGCAGC TCTTAAAAATTCTTT Ssed_2614 3167481 - 3167275 - | cold-shock DNA-binding domain-containing protein TERM 3142 3167414 - 3167400 - G 77 -4.2 -5.13741 | opp_overlap 3167401, overlap 3167401 GGAAGTGAACAAAAA CGTCTG GAC CAGACT CTTGCTCGATAAATC TERM 3143 3167613 - 3167596 - R 74 -4.1 -5.05037 | GAACATAAAAATAAA TGCAACC TTCG AGCTGCA ACTACTATAAATCAT Ssed_2615 3168597 - 3167782 - | 23S rRNA methyltransferase A Ssed_2616 3169439 - 3168618 - | hypothetical protein Ssed_2617 3169751 - 3171163 + | exonuclease I Ssed_2618 3171260 - 3172150 + | cytidine deaminase TERM 3144 3172176 - 3172193 + T 100 -11.3 -5.72622 | opp_overlap 3172176 CTAGTCAATCAAAAA GGACTGC CGAA GCAGTCC TTTTTTCTTTCTGAA TERM 3145 3172193 - 3172176 - T 95 -11.3 -4.88407 | opp_overlap 3172176 CTAGTCAATCAAAAA GGACTGC CGAA GCAGTCC TTTTTTCTTTCTGAA Ssed_2619 3173097 - 3172222 - | 6-phosphogluconate dehydrogenase, NAD-binding TERM 3146 3172950 - 3172919 - G 81 -5.8 -4.87328 | gap 1, opp_overlap 3172920 3172921, overlap 3172914 CAGATAAAGACAAAA TCCTGCCCCTGTGCT GCA AGCTCAGGG-CTAGA TTTGGATTGTCCGTC TERM 3147 3173194 - 3173179 - R 100 -10.4 -5.36441 | opp_overlap 3173179 GTCGGATAGAAAAAA GGCACC CTAA GGTGCC TTATCATACTGCAAT TERM 3148 3173179 - 3173194 + r 77 -10.4 -3.44229 | opp_overlap 3173179 GTCGGATAGAAAAAA GGCACC CTAA GGTGCC TTATCATACTGCAAT Ssed_2620 3173696 - 3173214 - | cytosolic long-chain acyl-CoA thioester hydrolase family protein Ssed_2621 3174161 - 3173793 - | hypothetical protein TERM 3149 3174408 - 3174395 - R 100 -9.5 -5.68039 | opp_overlap 3174395 AAAGGCATAAAAAAA GCGCC CACA GGCGC TTTTCAAAGAGTAAT TERM 3150 3174395 - 3174408 + r 86 -9.5 -4.08945 | opp_overlap 3174395 AAAGGCATAAAAAAA GCGCC CACA GGCGC TTTTCAAAGAGTAAT Ssed_2622 3175702 - 3174446 - | 3-oxoacyl-(acyl-carrier-protein) synthase II TERM 3151 3174735 - 3174745 + g 73 -8.2 -3.85698 | ACTGATTTAACCGCC GCCG CTT CGGC TTTATCACCCGCAGG TERM 3152 3175871 - 3175892 + r 100 -14.5 -4.42788 | opp_overlap 3175871 AGCCAGAAACAAAAA CAGGCAGCA TAAA TGCTGCCTG TTTTCTAGAATTCAG TERM 3153 3175892 - 3175871 - R 100 -14.5 -5.38958 | opp_overlap 3175871 AGCCAGAAACAAAAA CAGGCAGCA TAAA TGCTGCCTG TTTTCTAGAATTCAG TERM 3154 3175934 - 3175958 + r 76 -7.2 -4.24123 | CTTTGAAACGTAGTC GATCGCTGCT TGAAC AGTAGTGATC TTTTCAGCTTCTTCA Ssed_2623 3176143 - 3175910 - | acyl carrier protein Ssed_2624 3177049 - 3176303 - | 3-oxoacyl-(acyl-carrier-protein) reductase Ssed_2625 3177988 - 3177059 - | malonyl CoA-acyl carrier protein transacylase TERM 3155 3177606 - 3177616 + g 71 -8.2 -3.69283 | opp_overlap 3177597, overlap 3177597 ATAGCACCGCTGCCT GCCG GCA CGGC TTGTTGCATCAGTTG Ssed_2626 3178998 - 3178039 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3156 3178179 - 3178211 + g 80 -12.2 -2.76313 | opp_overlap 3178189 3178210, overlap 3178176 3178189 3178210 CAGAGGTATTACCGT GCTTAGCTAAGGTT AAAAC AACCTTATCTAAGC TCATGTTGAGCTTCT TERM 3157 3178668 - 3178657 - G 75 -5.8 -4.56969 | AAGCGCATAAACAAA GCCT GAGC AGGC CGCTGCGATATCAAA Ssed_2627 3180038 - 3179010 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 3158 3179271 - 3179260 - G 91 -4.4 -5.63504 | AACCGTACAAAAAAA CCTT TGGT AAGG CCCTTTTCTAATTGA TERM 3159 3179982 - 3179953 - G 91 -10.7 -4.31904 | opp_overlap 3179957, overlap 3179957 AGAAAGGAATATAAA CGAAGTGCCTGCA AGGC TGCAGGCACTGTG ATGCGGGGACCATAA TERM 3160 3179978 - 3179957 - G 95 -14.5 -3.69943 | opp_overlap 3179957, overlap 3179953 AGGAATATAAACGAA GTGCCTGCA AGGC TGCAGGCAC TGTGATGCGGGGACC TERM 3161 3179957 - 3179978 + g 90 -14.5 -2.78384 | opp_overlap 3179957 3179953 AGGAATATAAACGAA GTGCCTGCA AGGC TGCAGGCAC TGTGATGCGGGGACC Ssed_2628 3180224 - 3180054 - | ribosomal protein L32 Ssed_2629 3180766 - 3180242 - | hypothetical protein Ssed_2630 3181104 - 3181694 + | maf protein Ssed_2631 3181823 - 3183226 + | diguanylate cyclase with PAS/PAC sensor TERM 3162 3183332 - 3183294 - T 76 -9.1 -3.71848 | opp_overlap 3183300, overlap 3183296 CCCGGCCAGGAAGAA TAGGAAGAGAGATTA AAAGTAAAA TAATCTCTCTTCCTC AAATTTAATGTCCCA TERM 3163 3183330 - 3183296 - T 86 -11.7 -3.44284 | opp_overlap 3183300, overlap 3183294 CGGCCAGGAAGAATA GGAAGAGAGATTA AAAGTAAAA TAATCTCTCTTCC TCAAATTTAATGTCC Ssed_2632 3183987 - 3183337 - | HAD family hydrolase Ssed_2633 3184961 - 3183984 - | lysozyme TERM 3164 3188419 - 3188397 - g 74 -9.9 -3.53012 | GCCGCTCCGGTTAAA GCTGAAGCA TCTGT TGCCTCAGC GGCACCTGCTAAACC TERM 3165 3188572 - 3188523 - g 88 -12.1 -3.64599 | overlap 3188529 3188542 GCAGTACAGGTGAAA GCAGAAGCCCCTGTGAAAACTGA AGCA TCAGTTGCCACAGCGGCGCCAGC TAAACCCGTCGCGCC TERM 3166 3188566 - 3188529 - g 91 -13.5 -3.60865 | overlap 3188523 3188542 CAGGTGAAAGCAGAA GCCCCTGTGAAAACTGA AGCA TCAGTTGCCACAGCGGC GCCAGCTAAACCCGT Ssed_2634 3185535 - 3189140 + | ribonuclease TERM 3167 3189195 - 3189162 - f 75 -10.4 -3.16742 | opp_overlap 3189162 3189163 3189169, overlap 3189169 GTTAAGCTGTATTAA CGAGAAAGCCATGC ATCACA GCATGGCTTTTTCA TTTTCTTACTGCGGA TERM 3168 3189162 - 3189195 + F 93 -10.4 -4.71426 | opp_overlap 3189162 3189169, overlap 3189163 3189169 GTTAAGCTGTATTAA CGAGAAAGCCATGC ATCACA GCATGGCTTTTTCA TTTTCTTACTGCGGA TERM 3169 3189163 - 3189194 + F 95 -13.9 -3.42374 | opp_overlap 3189162 3189169, overlap 3189162 3189169 TTAAGCTGTATTAAC GAGAAAGCCATGC ATCACA GCATGGCTTTTTC ATTTTCTTACTGCGG TERM 3170 3189169 - 3189188 + F 90 -9.3 -5.17786 | opp_overlap 3189169 3189162, overlap 3189163 3189162 TGTATTAACGAGAAA GCCATGC ATCACA GCATGGC TTTTTCATTTTCTTA TERM 3171 3189188 - 3189169 - f 83 -9.3 -4.08144 | opp_overlap 3189163 3189162 3189169, overlap 3189162 TGTATTAACGAGAAA GCCATGC ATCACA GCATGGC TTTTTCATTTTCTTA TERM 3172 3189667 - 3189683 + G 79 -10.9 -3.61178 | CGATTGTTATTTTTC TTGCCCA ACT TGGGCAA TTTAAGGTACCTGAC Ssed_2635 3189273 - 3190829 + | sulphate transporter TERM 3173 3190862 - 3190880 + T 100 -10.3 -5.36441 | opp_overlap 3190862 AGACAGTGAAAAAAA GGCGAGT GAATA ACTCGCC TTTTTTATATCCCAA TERM 3174 3190880 - 3190862 - T 100 -10.3 -5.51402 | opp_overlap 3190862 AGACAGTGAAAAAAA GGCGAGT GAATA ACTCGCC TTTTTTATATCCCAA Ssed_2636 3191804 - 3190899 - | bifunctional methionine sulfoxide reductase B/A protein TERM 3175 3192058 - 3192043 - H 78 -4 -5.19328 | overlap 3192044 ACCGGACAATAAAAA CGTGAT TTCA ATCACA CTTAGTTGCGAGTTA TERM 3176 3192862 - 3192850 - g 71 -9.1 -3.59262 | opp_overlap 3192847 3192832 GCCGATACCTCCAAA GCGAG AGT CTCGC TGCCTCTATTTTTAC Ssed_2637 3192091 - 3192963 + | 2OG-Fe(II) oxygenase TERM 3177 3192995 - 3192973 - f 88 -11.4 -3.6849 | ATCTAATCCCAATAA CTTCTCTCTC AAA AAGAGAGAAG GAGCCACACTCACAT TERM 3178 3193064 - 3193091 + F 82 -11.4 -3.23009 | opp_overlap 3193071, overlap 3193071 TTTTCGTAGCCCGCA TACAAAAGCGCC TATT GGCGCTTTTTTA TTGATGAAATTTTTC TERM 3179 3193071 - 3193084 + F 100 -9.5 -5.5112 | opp_overlap 3193071, overlap 3193064 AGCCCGCATACAAAA GCGCC TATT GGCGC TTTTTTATTGATGAA TERM 3180 3193084 - 3193071 - f 91 -9.5 -4.52857 | opp_overlap 3193071 3193064 AGCCCGCATACAAAA GCGCC TATT GGCGC TTTTTTATTGATGAA TERM 3181 3193904 - 3193869 - g 76 -8.2 -4.10657 | opp_overlap 3193872 3193874, overlap 3193872 CCATAGGCCGTAAAA GAGGAGCGCTACGTCC CGGT GGACGTATCGACCTTC ATAAAGTTTCTGAGC Ssed_2638 3193154 - 3194092 + | ribosomal biogenesis GTPase TERM 3182 3194114 - 3194138 + T 95 -11.5 -4.76644 | opp_overlap 3194114, overlap 3194118 ATATGAATCAGACAA GCCTCAGCTAT TAA ATAGGTGAGGC TTTTTACTGGCTGTT TERM 3183 3194138 - 3194114 - T 88 -11.5 -3.61806 | opp_overlap 3194114 3194118 ATATGAATCAGACAA GCCTCAGCTAT TAA ATAGGTGAGGC TTTTTACTGGCTGTT TERM 3184 3194203 - 3194192 - T 73 -7.2 -4.07687 | AGCTCTGCTCTAAAA CGGC CTCA GCCG TGGGTGAACGACATA Ssed_2639 3195129 - 3194284 - | DNA ligase Ssed_2640 3195447 - 3195818 + | diacylglycerol kinase TERM 3185 3195828 - 3195848 + F 91 -9.8 -4.49716 | CTCTGATTAACATCT GGAGTCAT GCTCA ATGACTCC TTTTCCCTTTTCTTT Ssed_2641 3196098 - 3196979 + | hypothetical protein Ssed_2642 3197324 - 3197758 + | hypothetical protein TERM 3186 3197820 - 3197774 - T 71 -7.3 -3.88498 | gap 1, overlap 3197777 CCTTCACAGATTAAA CAGTGAACAGTCATTGCGCCGA CATG TCGG-GCACTGGCTGTCCATCG CATCTTAACCATAGA TERM 3187 3197817 - 3197777 - T 70 -9.8 -2.71329 | gap 1, overlap 3197774 TCACAGATTAAACAG TGAACAGTCATTGCGCCGA CATG TCGG-GCACTGGCTGTCCA TCGCATCTTAACCAT Ssed_2643 3199051 - 3197825 - | nucleoside recognition domain-containing protein TERM 3188 3198011 - 3197994 - G 74 -9.1 -3.66646 | overlap 3198008 AATATCGCAGCCAAA CGACCCG CAAA CGAGTCG ACACCATGGTGCTCC TERM 3189 3198577 - 3198541 - G 77 -3.9 -5.08601 | gap 3, overlap 3198543 3198544 GTATGGGAAGAAAAA TATCCGCCGGCGCAGCAG CTCC CTGCTGCGC--ACG-ATA CAGAAAGACGGTGAC TERM 3190 3198611 - 3198584 - G 77 -8.4 -4.1523 | overlap 3198586 CGCACGATACAGAAA GACGGTGACC GGCACTAA GGTCACCGAC GAAGTATTGAGTACT TERM 3191 3198609 - 3198586 - G 76 -9.6 -3.67067 | overlap 3198584 CACGATACAGAAAGA CGGTGACC GGCACTAA GGTCACCG ACGAAGTATTGAGTA TERM 3192 3198864 - 3198828 - G 72 -10.9 -2.60211 | opp_overlap 3198840, overlap 3198827 3198840 3198844 AGCGGTTCAAAAATT TTAGCGAAAAAACCGAC GAC GCCGGCTTTCTCGCCGA CTCGCATCAGACCCA TERM 3193 3198852 - 3198840 - G 87 -6.9 -5.09225 | opp_overlap 3198840, overlap 3198828 3198827 3198844 ATTTTAGCGAAAAAA CCGAC GAC GCCGG CTTTCTCGCCGACTC Ssed_2644 3199274 - 3200710 + | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 3194 3200855 - 3200884 + T 100 -10.1 -5.9667 | AGAGCCATTCCCCTG GACCCAGAACAAT TGGA ATAGTTTTGGGTC TTTTTTTGTCTTTTT Ssed_2645 3201701 - 3200913 - | TatD family hydrolase TERM 3195 3201829 - 3201811 - R 72 -9.6 -3.0127 | overlap 3201813 GGATGGAAGGATACA GACCTACA TGG TGCAGGTC AAATCACCGGACGCG Ssed_2646 3202140 - 3201814 - | type IV pilus assembly PilZ Ssed_2647 3203062 - 3202148 - | DNA-directed DNA polymerase TERM 3196 3202953 - 3203008 + g 74 -6.3 -4.45945 | gap 1, opp_overlap 3202952 3202964, overlap 3202957 GCTAAAGAGAGAATT TCACCACCATATCCGTTATGCACCCC AACAA GGTATGCATGACCGATATGCT-GTGA TTTTAGTTGCTCACT Ssed_2648 3203694 - 3203062 - | dTMP kinase Ssed_2649 3204698 - 3203691 - | aminodeoxychorismate lyase TERM 3197 3204028 - 3204040 + g 71 -9.1 -3.57648 | overlap 3204027 ATCCAGGGACGTTCG CTGGC CTT GCCAG TCTCTTTTTCAATTA Ssed_2650 3205510 - 3204695 - | aminotransferase, class IV Ssed_2651 3206399 - 3205764 - | uridine kinase Ssed_2652 3207527 - 3206412 - | ATP-binding Mrp/Nbp35 family protein TERM 3198 3206462 - 3206480 + g 88 -8.8 -4.77079 | ATTGTACTTTGGTGA GTGCGAGC TGA GCTCCCAC TTTTCTTGCTATCTC TERM 3199 3207090 - 3207110 + g 74 -9.7 -3.57561 | opp_overlap 3207087 3207078 3207076 3207089 AGAGGGACCATAGAT GTCGGCATC CAG GATGCCCAC TTTAGCGCCTTCGGC TERM 3200 3209394 - 3209378 - g 74 -6.5 -4.31837 | opp_overlap 3209381, overlap 3209374 3209369 AAGAAAGCTAAGAAA TCGGCTG AAA CAGCTGA TGTCGCAGTAGATAC Ssed_2653 3207689 - 3209767 + | methionyl-tRNA synthetase TERM 3201 3209848 - 3209829 - T 100 -15 -5.56264 | opp_overlap 3209829 GTTAAACATAAAAAA GGGCCGCA GTGA TGCGGCCC TTTTTATTTAACCAG TERM 3202 3209829 - 3209848 + T 100 -15 -5.27335 | opp_overlap 3209829 GTTAAACATAAAAAA GGGCCGCA GTGA TGCGGCCC TTTTTATTTAACCAG Ssed_2654 3211517 - 3209934 - | hypothetical protein TERM 3203 3211678 - 3211662 - R 83 -6.5 -5.1287 | opp_overlap 3211662 CTCAGACGCAAAAAA GCCCC ATAGATA GGGGC TTTTAAGGGATATTA Ssed_2655 3212276 - 3211776 - | CreA family protein Ssed_2656 3213655 - 3212276 - | putative chaperone TERM 3204 3212357 - 3212381 + g 76 -9.3 -3.84808 | opp_overlap 3212372 3212373, overlap 3212371 3212372 ACCTACTACGATAGG GATAGCGGGAT ATA ATCCTGCGATC TTGTTATAGATTGCA TERM 3205 3213822 - 3213797 - R 93 -9.1 -5.33785 | opp_overlap 3213795 3213797 AATTATGAGAAAAAA TGGGTATTAAC TTGC GATAATACCCA TGTTTCAAATCAGGC TERM 3206 3213797 - 3213822 + r 72 -9.1 -3.38046 | opp_overlap 3213797, overlap 3213795 AATTATGAGAAAAAA TGGGTATTAAC TTGC GATAATACCCA TGTTTCAAATCAGGC Ssed_2657 3214341 - 3213832 - | YbaK/prolyl-tRNA synthetase associated region TERM 3207 3214691 - 3214677 - g 73 -8.5 -3.84246 | GTCTTAAGCATTAAA GGGGC AATAG GCCCC GCCGTAAGTGATTAT TERM 3208 3215539 - 3215553 + G 74 -10 -3.5032 | opp_overlap 3215536, overlap 3215537 TCACCGAAGCCATGA TGCCGA GTT TCGGCA TATTTGGTGTAGGCG Ssed_2658 3214488 - 3215993 + | hypothetical protein Ssed_2659 3215974 - 3216774 + | band 7 protein TERM 3209 3216847 - 3216822 - T 100 -11.9 -5.5074 | opp_overlap 3216822 GAACCCAATAAAAAA GCCGTCTAGTG CTAG CACTAGATGGC TTTTTTAAATACAGC TERM 3210 3216822 - 3216847 + T 100 -14.1 -5.08824 | opp_overlap 3216822 GAACCCAATAAAAAA GCCGTCTAGTG CTAG CACTAGATGGC TTTTTTAAATACAGC Ssed_2660 3217909 - 3216929 - | rhodanese domain-containing protein TERM 3211 3218403 - 3218369 - g 86 -12.2 -3.5361 | CAATGATCCAGATAA TCTCTTACTTGTGGGG GAG CCACACAAGCAGGAGA TAGCTAAGGCATTGA Ssed_2661 3218127 - 3218786 + | glutathione S-transferase domain-containing protein Ssed_2662 3218884 - 3219840 + | hypothetical protein Ssed_2663 3219837 - 3220340 + | hypothetical protein Ssed_2664 3220467 - 3221099 + | methyltransferase type 11 Ssed_2665 3221481 - 3222707 + | Bcr/CflA subfamily drug resistance transporter Ssed_2666 3223270 - 3224991 + | acetolactate synthase 3 catalytic subunit Ssed_2667 3224991 - 3225485 + | acetolactate synthase 3 regulatory subunit TERM 3212 3225509 - 3225534 + T 75 -10.5 -3.13109 | opp_overlap 3225514, overlap 3225514 TCAACTTAAGTACTA AAAAAGGGAGC TCAG GCTCCCTTTTA CTTTTCACTACTCTA TERM 3213 3225514 - 3225529 + T 93 -10.4 -4.68645 | opp_overlap 3225514, overlap 3225509 TTAAGTACTAAAAAA GGGAGC TCAG GCTCCC TTTTACTTTTCACTA TERM 3214 3225529 - 3225514 - T 100 -10.4 -5.2189 | opp_overlap 3225509 3225514 TTAAGTACTAAAAAA GGGAGC TCAG GCTCCC TTTTACTTTTCACTA Ssed_2668 3226048 - 3225605 - | heat shock protein HSP20 TERM 3215 3226312 - 3226327 + r 91 -10.4 -4.60487 | opp_overlap 3226312 ACAGGCATAAAAAAA GCAGCC CGAA GGCTGC TTTTTGAAAGTAATA TERM 3216 3226327 - 3226312 - R 100 -10.4 -5.65177 | opp_overlap 3226312 ACAGGCATAAAAAAA GCAGCC CGAA GGCTGC TTTTTGAAAGTAATA Ssed_2669 3228061 - 3226352 - | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor Ssed_2670 3229098 - 3228427 - | carboxylesterase Ssed_2671 3229267 - 3230280 + | glutathione S-transferase domain-containing protein Ssed_2672 3230574 - 3230353 - | hypothetical protein TERM 3217 3230626 - 3230609 - R 100 -9.9 -5.98675 | opp_overlap 3230609 CATAAAAACAAAAAA CCAGCAA AGAG TTGCTGG TTTATTCTTCACACG TERM 3218 3230609 - 3230626 + r 90 -9.9 -4.44667 | opp_overlap 3230609 CATAAAAACAAAAAA CCAGCAA AGAG TTGCTGG TTTATTCTTCACACG Ssed_2673 3231143 - 3230661 - | peptidylprolyl isomerase, FKBP-type Ssed_2674 3232099 - 3231227 - | hypothetical protein TERM 3219 3232216 - 3232238 + r 74 -9.2 -3.44325 | opp_overlap 3232216 TGGATAAAACCCAAA GGTGCAATCA TTT TGATTACACC TTAATTATGGAGAAT TERM 3220 3232238 - 3232216 - R 90 -11.4 -3.96705 | opp_overlap 3232216 TGGATAAAACCCAAA GGTGCAATCA TTT TGATTACACC TTAATTATGGAGAAT Ssed_2675 3233404 - 3232271 - | lytic murein transglycosylase Ssed_2676 3233713 - 3234072 + | hypothetical protein TERM 3221 3234098 - 3234078 - f 79 -6.9 -4.55653 | overlap 3234087 AGAAGAATAAAACAA GCTGAGTAA CGC TTACTGAGC GAAAGATGCTTCTTA Ssed_2677 3234190 - 3234855 + | hypothetical protein TERM 3222 3234875 - 3234859 - T 82 -8 -4.56775 | opp_overlap 3234847 3234859 ACTTGGTTTTAAAAA GGCCAT TATCT ATGGCC TTTAAGCAGTACAGC Ssed_2678 3235829 - 3234891 - | response regulator receiver modulated CheW protein TERM 3223 3236087 - 3236073 - H 73 -5.6 -4.4891 | GTGACTATGATAAAA GCCGCC AGA AACGGC CAAAAGACTCACAAA TERM 3224 3236105 - 3236130 + H 70 -3.3 -4.93318 | opp_overlap 3236111 AAAGACTCACAAATT CTAACACTTAT AATC ATAAGTGACAG TTTTTCTAACTTATA Ssed_2679 3236818 - 3236991 + | hypothetical protein Ssed_2680 3238243 - 3237320 - | hypothetical protein TERM 3225 3237526 - 3237515 - G 80 -4.4 -5.24989 | overlap 3237516 CCACATATCAAAAAA CTCT CGAT AGAG CTTACCGAAATGAAA Ssed_2681 3238446 - 3238853 + | hypothetical protein TERM 3226 3238869 - 3238892 + T 100 -14 -4.41353 | opp_overlap 3238869 AACGACAATAAAAAA CGCCGAATTA ACTT TAATTCGGCG TTTTACTATATGTAA TERM 3227 3238892 - 3238869 - T 100 -14 -5.59534 | opp_overlap 3238869 AACGACAATAAAAAA CGCCGAATTA ACTT TAATTCGGCG TTTTACTATATGTAA Ssed_2682 3239620 - 3238913 - | ABC transporter Ssed_2683 3239834 - 3240085 + | integral membrane protein TerC Ssed_2684 3240316 - 3241308 + | cytochrome-c peroxidase TERM 3228 3241383 - 3241355 - T 100 -16.9 -4.08692 | opp_overlap 3241360, overlap 3241360 GAATGCCTGTTAAAA CAAAACGCCAGCA ATA TGCTGGCGTTTTA TTCAAAAAATCTAGA TERM 3229 3241360 - 3241378 + T 100 -14.6 -4.63486 | opp_overlap 3241360 3241355 CCTGTTAAAACAAAA CGCCAGCA ATA TGCTGGCG TTTTATTCAAAAAAT TERM 3230 3241378 - 3241360 - T 100 -14.6 -5.07652 | opp_overlap 3241360, overlap 3241355 CCTGTTAAAACAAAA CGCCAGCA ATA TGCTGGCG TTTTATTCAAAAAAT Ssed_2685 3241758 - 3241402 - | hypothetical protein TERM 3231 3241903 - 3241879 - R 72 -8.7 -3.55563 | opp_overlap 3241879 3241882, overlap 3241880 ATCCGAGTTTTTAAA CTAGTACCAAT TAT ATCGGTACTAA TCTGTACTCAGGCTT TERM 3232 3241902 - 3241880 - R 72 -10 -2.73124 | opp_overlap 3241879 3241882, overlap 3241879 TCCGAGTTTTTAAAC TAGTACCAAT TAT ATCGGTACTA ATCTGTACTCAGGCT Ssed_2686 3243078 - 3242185 - | LysR family transcriptional regulator TERM 3233 3243632 - 3243618 - g 73 -3.6 -4.90381 | TGCAACAGAAGAAAA TAAAGA CCA TCCTTA CCCCGCCATTTACGG Ssed_2687 3243301 - 3244341 + | 4-hydroxyphenylpyruvate dioxygenase TERM 3234 3244381 - 3244397 + F 100 -12.3 -5.80951 | opp_overlap 3244381 TAAGCCGATGTAAAA CCAGCCA ACT TGGCTGG TTTTTTGTTTTCACT TERM 3235 3244397 - 3244381 - f 100 -12.3 -4.19704 | opp_overlap 3244381 TAAGCCGATGTAAAA CCAGCCA ACT TGGCTGG TTTTTTGTTTTCACT Ssed_2688 3244470 - 3245087 + | lysine exporter protein (LysE/YggA) TERM 3236 3246377 - 3246391 + G 78 -5.6 -4.85599 | GGATCGCAGTGAGTA TCTGGG CGA CCCTGA TTTTTATAACGTACC Ssed_2689 3245349 - 3247097 + | gamma-glutamyltransferase TERM 3237 3247109 - 3247145 + T 83 -10.9 -3.6959 | opp_overlap 3247115, overlap 3247111 3247113 3247115 TTAATCAACAAGAAT AAAAAATGGGGGAAGCA TTA TGCTTCCCCCATCTATA TTTCAATAATAGTCT TERM 3238 3247111 - 3247143 + T 95 -13.5 -3.42663 | opp_overlap 3247115, overlap 3247109 3247113 3247115 AATCAACAAGAATAA AAAATGGGGGAAGCA TTA TGCTTCCCCCATCTA TATTTCAATAATAGT TERM 3239 3247113 - 3247141 + T 100 -16.1 -3.28122 | opp_overlap 3247115, overlap 3247111 3247109 3247115 TCAACAAGAATAAAA AATGGGGGAAGCA TTA TGCTTCCCCCATC TATATTTCAATAATA TERM 3240 3247139 - 3247115 - T 100 -18.7 -5.70522 | opp_overlap 3247113 3247111 3247109 3247115 AACAAGAATAAAAAA TGGGGGAAGCA TTA TGCTTCCCCCA TCTATATTTCAATAA TERM 3241 3247115 - 3247139 + T 100 -18.7 -3.20029 | opp_overlap 3247115, overlap 3247113 3247111 3247109 AACAAGAATAAAAAA TGGGGGAAGCA TTA TGCTTCCCCCA TCTATATTTCAATAA Ssed_2690 3248741 - 3247167 - | methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor TERM 3242 3248506 - 3248519 + g 70 -2.3 -4.84311 | TTCACCACCCCAATC CAAGG CTTA CCCTG TTTTATTCTCTCCCA TERM 3243 3248976 - 3248944 - R 86 -7.1 -5.14477 | overlap 3248973 TACACATCTAAAAAA CCAGTCTTAGCGT TCGATTC AAACTAAGACTGG CATAAACCAGGAAAG Ssed_2691 3250634 - 3249030 - | hypothetical protein TERM 3244 3249730 - 3249742 + g 75 -5.5 -4.73388 | CGCATGCCTTGCTGT CGCAG CCC TTGCG TTTTTAGTGCAGATT TERM 3245 3251129 - 3251147 + G 77 -8.8 -4.14243 | opp_overlap 3251131 ACCGACCTTCGCTAA CACCATCG AAG CGATGGAG TTTTCCGGTGAGCTG Ssed_2692 3250824 - 3253004 + | peptidyl-dipeptidase Dcp TERM 3246 3253083 - 3253066 - f 100 -12.7 -4.24404 | opp_overlap 3253066 ATGGAAAGTTTAAAA GCACGGC TATT GCCGTGC TTTTTTATCCCTCAA TERM 3247 3253066 - 3253083 + F 100 -12.7 -5.28176 | opp_overlap 3253066 ATGGAAAGTTTAAAA GCACGGC TATT GCCGTGC TTTTTTATCCCTCAA Ssed_2693 3253121 - 3253726 + | hypothetical protein TERM 3248 3254237 - 3254207 - f 93 -9.9 -4.6902 | opp_overlap 3254211, overlap 3254209 CGAGAAGTTTAAAAA CATACTGTGATTG ATTTG CAATCACAGTATT AAAACCAGTCACAAT TERM 3249 3254235 - 3254209 - f 93 -12.5 -3.95535 | opp_overlap 3254211, overlap 3254207 AGAAGTTTAAAAACA TACTGTGATTG ATTTG CAATCACAGTA TTAAAACCAGTCACA TERM 3250 3254211 - 3254233 + F 78 -10.7 -3.02144 | opp_overlap 3254209 3254207 AAGTTTAAAAACATA CTGTGATTG ATTTG CAATCACAG TATTAAAACCAGTCA TERM 3251 3254344 - 3254321 - g 91 -3.8 -5.68023 | TGATAATGAAAAAAA CTAATCGCAG TGTA CTGTGCTTAG CCGTACTCGCTGCTT Ssed_2694 3254311 - 3256446 + | phosphatase/nucleotidase TERM 3252 3256462 - 3256477 + F 100 -10.4 -6.02546 | opp_overlap 3256462 ATCGCACCCAATAAA GGCCTG GTAA CAGGCC TTTTTTTTGCTTTGG TERM 3253 3256477 - 3256462 - f 89 -10.4 -4.20783 | opp_overlap 3256462 ATCGCACCCAATAAA GGCCTG GTAA CAGGCC TTTTTTTTGCTTTGG Ssed_2695 3256489 - 3257793 + | hypothetical protein TERM 3254 3257833 - 3257858 + T 100 -7 -5.56673 | gap 1, opp_overlap 3257833 3257820 CAGCCAAATAAAAAA GAGAACA-AGC AATCA GCTCTGTTCTC TTTTTTCTTGTCACT TERM 3255 3257858 - 3257833 - T 100 -7 -5.65927 | gap 1, opp_overlap 3257833, overlap 3257820 CAGCCAAATAAAAAA GAGAACA-AGC AATCA GCTCTGTTCTC TTTTTTCTTGTCACT Ssed_2696 3259733 - 3257943 - | acyl-CoA dehydrogenase domain-containing protein TERM 3256 3258580 - 3258590 + g 77 -6.8 -4.60041 | overlap 3258567 GCGGCCAACTTATTT GCCA TTT TGGC TTTTTCCGGATCGCT Ssed_2697 3260001 - 3260849 + | aldose 1-epimerase TERM 3257 3260941 - 3260900 - f 70 -5.4 -4.40184 | gap 1, opp_overlap 3260908 TCAAGCAAACACAAA TCAAACAAGGCCTGCTTCA CTAAC TGAAA-AGGCCTTTTTTAA TGCTGGCGAATTTAT TERM 3258 3260908 - 3260933 + F 75 -2.6 -5.1861 | gap 1, opp_overlap 3260900 ACACAAATCAAACAA GGCCTGCTTCA CTAAC TGAAA-AGGCC TTTTTTAATGCTGGC Ssed_2698 3261389 - 3265006 + | hypothetical protein Ssed_2699 3265185 - 3265385 + | hypothetical protein Ssed_2700 3265413 - 3265733 + | hypothetical protein TERM 3259 3265798 - 3265781 - f 74 -9.1 -3.51924 | gap 1, opp_overlap 3265782 3265783, overlap 3265783 TCCCGATTTATATAA GAGCCCGC ACT GCGGGC-C TTTTTATTGCGCCAA TERM 3260 3265782 - 3265798 + F 90 -9.3 -5.06414 | opp_overlap 3265781 3265783, overlap 3265783 CCCGATTTATATAAG AGCCCGC ACT GCGGGCC TTTTTATTGCGCCAA TERM 3261 3265797 - 3265783 - f 87 -12.8 -3.33525 | opp_overlap 3265783 3265782, overlap 3265781 CCGATTTATATAAGA GCCCGC ACT GCGGGC CTTTTTATTGCGCCA TERM 3262 3265783 - 3265797 + F 90 -12.8 -3.63367 | opp_overlap 3265781 3265783, overlap 3265782 CCGATTTATATAAGA GCCCGC ACT GCGGGC CTTTTTATTGCGCCA Ssed_2701 3266051 - 3267352 + | anaerobic C4-dicarboxylate transporter TERM 3263 3267426 - 3267398 - T 75 -10.3 -3.11182 | opp_overlap 3267409 3267410, overlap 3267371 3267395 3267407 3267410 CTTGAATATAAATGA GCTTAGCAATCAG CCC CTGTCTGCCAAGC GACAGGGGCCTTGTC TERM 3264 3267409 - 3267436 + T 86 -12 -3.38178 | gap 1, opp_overlap 3267398 3267395 3267407 3267410, overlap 3267410 3267430 3267431 ATGAGCTTAGCAATC AGCCCCTGTCTGC CAA GC-GACAGGGGCC TTGTCCCATTACTTA TERM 3265 3267435 - 3267410 - T 95 -15.5 -2.78547 | gap 1, opp_overlap 3267409 3267410 3267430 3267431, overlap 3267398 3267395 3267407 TGAGCTTAGCAATCA GCCCCTGTCTGC CAA GC-GACAGGGGC CTTGTCCCATTACTT TERM 3266 3267410 - 3267435 + T 95 -15.5 -2.62425 | gap 1, opp_overlap 3267398 3267395 3267410 3267407, overlap 3267409 3267430 3267431 TGAGCTTAGCAATCA GCCCCTGTCTGC CAA GC-GACAGGGGC CTTGTCCCATTACTT Ssed_2702 3267922 - 3267500 - | GCN5-related N-acetyltransferase Ssed_2703 3268548 - 3268033 - | hypothetical protein TERM 3267 3268266 - 3268252 - G 71 -2.8 -4.95155 | opp_overlap 3268265 CCGACACCAGAAAAA CCACAA ACT TTGTTG CTGGATAGCATACTT TERM 3268 3269765 - 3269752 - g 70 -8.1 -3.95042 | AAAACTTTAAGCAAA GCAGG AAAA CCTGC GAAACCATTCATTTG Ssed_2704 3269034 - 3269972 + | initiation factor 2B related Ssed_2705 3270902 - 3270042 - | regulatory protein, LysR TERM 3269 3270089 - 3270076 - G 73 -2.4 -5.02074 | opp_overlap 3270076 TCATCTTTTAAAAAA TCGA TAAATG TCGA TACTTTGGCTGAAGG TERM 3270 3270986 - 3271010 + r 71 -4.9 -4.63486 | opp_overlap 3270985 3270988, overlap 3270988 TATCACATAATTAAT TAGGCCAATCG AGT TGACTGGCCCA TTTTGTTGAGAAAGT Ssed_2706 3272135 - 3271038 - | hypothetical protein TERM 3271 3272163 - 3272196 + r 73 -9.7 -3.1247 | ATGAAATTATGTAGG TAGGCCTTACAAATT TAGT AATGTGTATGGCCTA TTGGATATACCAACT Ssed_2707 3273459 - 3272230 - | NADH:flavin oxidoreductase Ssed_2708 3273890 - 3273480 - | cytochrome c3 Ssed_2709 3274550 - 3274933 + | lactoylglutathione lyase Ssed_2710 3274951 - 3276051 + | NADH:flavin oxidoreductase/NADH oxidase TERM 3272 3276470 - 3276486 + G 76 -8.7 -4.08767 | GCAAGTTGTTTCTGT TTGCGCC GTC GGCGTAA TTTTAGCCGCCTCGG TERM 3273 3276535 - 3276553 + G 71 -4.5 -4.49344 | CGATCTCTATCTCCA GCACCTT GGCTG AAGGGGC TTTTATCATGAGTTT TERM 3274 3276778 - 3276768 - g 93 -6.8 -5.4505 | overlap 3276769 GTGTTTAATAAAAAA GTGG TAT CCAC CATTACCCCCTTAGC Ssed_2711 3276264 - 3277166 + | hypothetical protein Ssed_2712 3278970 - 3277498 - | RNA-directed DNA polymerase TERM 3275 3279080 - 3279090 + r 74 -4.6 -4.86001 | CCGCATCATTACAAT GCGG CCT TCGC TTTTTCTAGCCTCCT TERM 3276 3279593 - 3279627 + r 79 -11.5 -2.63891 | opp_overlap 3279593 3279600, overlap 3279600 GCTGAAAAGTAAGCA TGAAAAAGGGCTGGC ACTTG GCCAACCCTTTATCA GTATCTTTTAAACCT TERM 3277 3279627 - 3279593 - R 93 -13.7 -2.94333 | opp_overlap 3279593 3279600, overlap 3279600 GCTGAAAAGTAAGCA TGAAAAAGGGCTGGC ACTTG GCCAACCCTTTATCA GTATCTTTTAAACCT TERM 3278 3279600 - 3279620 + r 75 -8.2 -3.98204 | opp_overlap 3279593 3279600, overlap 3279593 AGTAAGCATGAAAAA GGGCTGGC ACTTG GCCAACCC TTTATCAGTATCTTT TERM 3279 3279620 - 3279600 - R 93 -10.4 -4.81685 | opp_overlap 3279600 3279593, overlap 3279593 AGTAAGCATGAAAAA GGGCTGGC ACTTG GCCAACCC TTTATCAGTATCTTT Ssed_2713 3280129 - 3279644 - | putative lactoylglutathione lyase Ssed_2714 3280398 - 3280216 - | hypothetical protein TERM 3280 3280415 - 3280375 - G 70 -2.5 -4.9792 | TATTCCACATAAAAA CACCCTTCTCACAGTGC GACTCAT GCAGTGATAAAAGGGCG TATCTTCCAAACCTG Ssed_2715 3280723 - 3281742 + | adenosine deaminase Ssed_2716 3282502 - 3282089 - | MutT/NUDIX family protein Ssed_2717 3283061 - 3282624 - | acetyltransferase Ssed_2718 3283464 - 3283252 - | hypothetical protein TERM 3281 3283379 - 3283339 - G 85 -7 -4.9792 | gap 2 TATTCCACATAAAAA CGCCC-TTC-TCACCGTGCG ACT CACACAATGATAAAAGGGCG TATCTTCAAGGCCTG TERM 3282 3283462 - 3283452 - G 71 -4.6 -4.62783 | CATCCATCTGAAAAA GCCA GTT CGGC ATCTGATAGGTAGGA Ssed_2719 3283759 - 3284502 + | hypothetical protein Ssed_2720 3285778 - 3284507 - | sensor histidine kinase Ssed_2721 3286469 - 3285768 - | DNA-binding response regulator TERM 3283 3286568 - 3286532 - R 77 -5.2 -4.98672 | opp_overlap 3286557 GGCAAAAACACAAAA GACAAGTTCCTCAA TCTTGGCTG TCGAGGCACCTGTC TCATTGCTATATGTC Ssed_2722 3287725 - 3286589 - | putative intracellular protease/amidase-like protein Ssed_2723 3290273 - 3287790 - | putative permease TERM 3284 3289710 - 3289730 + g 70 -9.7 -3.21199 | opp_overlap 3289706 3289703 CGGATTAATCATGGC GCGCATAGC GAC GCTATGCCC TTCCATTAATCGGTC Ssed_2724 3290950 - 3290273 - | ABC transporter, ATP-binding protein TERM 3285 3290730 - 3290741 + g 85 -5.8 -5.10497 | opp_overlap 3290730, overlap 3290720 AAATAGGCTAATGAA TGGC TTTG GCCA TTTTTTGAATAGATT TERM 3286 3291101 - 3291062 - R 93 -10.8 -4.8667 | gap 1 GACACCGCATAAAAA CGCCCTCCT-CACCGTGCG ACT CACACAATGTAAAAGGGCG TATCTTCTAGGGCTC Ssed_2725 3291671 - 3291213 - | hypothetical protein TERM 3287 3291444 - 3291459 + g 100 -2.6 -6.23317 | CACACTTTCAATAGA TAAAGG ATCT TCTTTA TTTTTTTCTTTTTGT TERM 3288 3291839 - 3291827 - R 77 -10.5 -3.37344 | overlap 3291823 GCCTTATTGAACGAA GCCGC TTC GCGGC AGAAGCAACAACGAC Ssed_2726 3292154 - 3291996 - | hypothetical protein TERM 3289 3292114 - 3292074 - G 78 -9.2 -4.13246 | gap 2, opp_overlap 3292074 TATTCCACACAGAAA CGCCCTTCT--CACTGTGCG GCT CACACAATGATAAAAGGGCG TATATTCCAAACTAA Ssed_2727 3294071 - 3292248 - | ATP-dependent OLD family endonuclease TERM 3290 3293729 - 3293752 + g 71 -8.2 -3.74747 | opp_overlap 3293729 3293734, overlap 3293701 TTTCAACGCAGTACA CCGAATATTC ATAA GAATAATCGG TTTGCTCAGCGTTCC TERM 3291 3294495 - 3294511 + r 72 -9.5 -3.01712 | CGATGGCAAGGCGAG GTTTCAC AAG GTGAAAC TCTTCGAGCGAGAGA TERM 3292 3294718 - 3294702 - R 77 -9.5 -3.50335 | GGCTATAAACAGCAA TGAAGGT GCG ACCTTCA AACACACACTCAAAT Ssed_2728 3295483 - 3294791 - | hypothetical protein TERM 3293 3295615 - 3295625 + r 73 -6.8 -4.18197 | TAATCGAGGCGCACA GAGC AGA GCTC TTTTCCATCGAAGCT Ssed_2729 3296162 - 3295599 - | phosphodiesterase TERM 3294 3296263 - 3296226 - R 93 -13.7 -3.14132 | CCCTTTTTCTATGAA TGACCTCTATATCCT CCGACTTC AGGATACAGAGGTCA TGCCATAAACGACGA Ssed_2730 3297891 - 3296284 - | sigma-54 dependent trancsriptional regulator TERM 3295 3297230 - 3297250 + g 71 -3.9 -4.72373 | overlap 3297232 CCTGCACTCTCACTC TCTGCGAAC TGT GTGCGCAAA TTTATCTTTTTTTCG TERM 3296 3298954 - 3298936 - g 70 -9.6 -3.10878 | opp_overlap 3298935 3298938, overlap 3298935 3298938 ATTATGTCAACAAAG CAGCCGAT AAT ATCGACTG GTTAAATGAGCAAGG TERM 3297 3299443 - 3299429 - g 73 -8.6 -3.89822 | TATGCAGGGCATAAA TGCCAT GAC ATGGCA GCCCACTAATCTATG TERM 3298 3299551 - 3299562 + G 78 -5.8 -4.77036 | opp_overlap 3299541 3299551 GACAACATGGCAACA TGGC TTGG GCCA TTTTTGATGATGCCA Ssed_2731 3298578 - 3300101 + | putative flavoprotein subunit of a reductase TERM 3299 3300103 - 3300135 + F 73 -7.6 -4.06384 | opp_overlap 3300101 3300099 3300104, overlap 3300106 AAGCCATTAAATAGT AGTATCAGGGAGGG TCCGC CCCTCCCTGAATCA TTTATCATGTTCAGG TERM 3300 3300134 - 3300104 - f 77 -11.1 -2.87769 | opp_overlap 3300103 3300106, overlap 3300101 3300099 AGCCATTAAATAGTA GTATCAGGGAGGG TCCGC CCCTCCCTGAATC ATTTATCATGTTCAG TERM 3301 3300106 - 3300132 + F 84 -12.3 -3.06651 | opp_overlap 3300104 3300101 3300099, overlap 3300103 CCATTAAATAGTAGT ATCAGGGAGGG TCCGC CCCTCCCTGAA TCATTTATCATGTTC TERM 3302 3300293 - 3300321 + G 80 -6.5 -4.67982 | opp_overlap 3300293 ACGGTGCGGAAGGCA TCATGGCGGGGGC TTT GCCGCCTCCGGGA TTTTATTACGTCAAC TERM 3303 3300618 - 3300597 - g 77 -4.3 -5.08824 | overlap 3300598 CTGGCATTCAAAAAA CTGGCATGT TGCC ACAGGCCTG GAGTTTGTCGTTCCA Ssed_2732 3300163 - 3301068 + | hypothetical protein TERM 3304 3301234 - 3301213 - f 93 -14.5 -2.80291 | opp_overlap 3301213 3301216, overlap 3301200 3301216 AATCACTCCACCATA GAAGACGGC TCAC GCCGTCTTC TATCTAAAGATAAAC TERM 3305 3301213 - 3301234 + F 93 -14.5 -2.88544 | opp_overlap 3301213 3301200 3301216, overlap 3301216 AATCACTCCACCATA GAAGACGGC TCAC GCCGTCTTC TATCTAAAGATAAAC TERM 3306 3301231 - 3301216 - f 79 -10.4 -3.54951 | opp_overlap 3301216 3301213, overlap 3301213 3301200 CACTCCACCATAGAA GACGGC TCAC GCCGTC TTCTATCTAAAGATA TERM 3307 3301216 - 3301231 + F 79 -10.4 -3.59202 | opp_overlap 3301213 3301200 3301216, overlap 3301213 CACTCCACCATAGAA GACGGC TCAC GCCGTC TTCTATCTAAAGATA TERM 3308 3301623 - 3301613 - g 77 -4 -5.15167 | opp_overlap 3301613 CACTATGAATAAAAA TACT AAA AGTA TGATATTTTCTCTTC Ssed_2733 3301602 - 3302834 + | putative alcohol dehydrogenase TERM 3309 3302940 - 3302927 - T 93 -8.1 -5.39721 | GGATGAGATAAAAAA CCGCA TCCT TGCGG TCAAAATTTTCCGTA Ssed_2734 3304051 - 3302987 - | hypothetical protein Ssed_2735 3305462 - 3304398 - | hypothetical protein TERM 3310 3304425 - 3304437 + g 70 -7.7 -3.81626 | overlap 3304416 CTCACTCACACCATG CCACT GAA AGTGG TTGTTGGGTTTCTTA TERM 3311 3305825 - 3305784 - R 100 -16.9 -3.53012 | opp_overlap 3305776 3305781 3305780, overlap 3305788 TTGGCTTGGCTTAAA TTAAGCTCTCCATTATACC AACC GGTATAATGGAGAACATAA GAGGTTATTAATCTC TERM 3312 3305821 - 3305788 - R 100 -17.7 -3.51232 | opp_overlap 3305776 3305781 3305780, overlap 3305784 CTTGGCTTAAATTAA GCTCTCCATTATACC AACC GGTATAATGGAGAAC ATAAGAGGTTATTAA Ssed_2736 3307089 - 3305833 - | ABC transporter permease protein Ssed_2737 3308348 - 3307086 - | membrane-fusion protein Ssed_2738 3309544 - 3308345 - | membrane-fusion protein Ssed_2739 3310572 - 3309541 - | multidrug resistance efflux pump-like protein TERM 3313 3309875 - 3309900 + g 100 -11.1 -4.91429 | overlap 3309867 TTCTTTTGCGACCAG GGATCGCTGCT ATAG AGCAGCGGACC TTTTATTTCGGCTTT TERM 3314 3309946 - 3309970 + g 75 -3.5 -5.03994 | overlap 3309947 3309948 TAAACCATTCAGGGC TTGTGCCAACT CGA GGTTTGCACGG TTTTTATCTATGGCC Ssed_2740 3311248 - 3310562 - | putative macrolide efflux ABC transporter, ATP-binding protein TERM 3315 3311354 - 3311297 - R 95 -12.9 -3.45764 | opp_overlap 3311302 3311307 3311346, overlap 3311291 3311298 3311300 3311308 ACAAAAAACGAGTAA CTATACCCAAACCACTTCAAGATGCAG GATT CAGTATCTTGAGGTAGCTTGGGTATAT AACTCATCCATTAGT TERM 3316 3311353 - 3311298 - R 100 -16.4 -2.65832 | opp_overlap 3311302 3311307 3311346, overlap 3311291 3311297 3311300 3311308 CAAAAAACGAGTAAC TATACCCAAACCACTTCAAGATGCAG GATT CAGTATCTTGAGGTAGCTTGGGTATA TAACTCATCCATTAG TERM 3317 3311351 - 3311300 - R 95 -14.6 -2.84946 | opp_overlap 3311302 3311307 3311346, overlap 3311291 3311298 3311297 3311308 AAAAACGAGTAACTA TACCCAAACCACTTCAAGATGCAG GATT CAGTATCTTGAGGTAGCTTGGGTA TATAACTCATCCATT TERM 3318 3311302 - 3311349 + r 84 -12.8 -2.92463 | opp_overlap 3311291 3311300 3311298 3311297 3311308, overlap 3311307 3311346 AAACGAGTAACTATA CCCAAACCACTTCAAGATGCAG GATT CAGTATCTTGAGGTAGCTTGGG TATATAACTCATCCA TERM 3319 3311640 - 3311602 - R 75 -9.8 -3.40788 | overlap 3311603 ATTGAATTTAATTAA TTTGCAATTAGTTAAGAA TGA CTCTCAACTAACTGCAAT AAATAAAGAAAGGAT TERM 3320 3311639 - 3311603 - R 90 -13.3 -2.63991 | overlap 3311602 TTGAATTTAATTAAT TTGCAATTAGTTAAGAA TGA CTCTCAACTAACTGCAA TAAATAAAGAAAGGA TERM 3321 3311684 - 3311664 - R 88 -11.3 -3.56836 | AAAGGATGTTGCAAA GGTTAATCA GAT TGATTAACC AGGTGAACAGTTAGA Ssed_2741 3312081 - 3311695 - | hypothetical protein Ssed_2742 3312691 - 3312239 - | hypothetical protein TERM 3322 3312748 - 3312771 + r 70 -2.6 -5.01811 | overlap 3312728 GTTATTGATGACAGT TATTGATAAT ACTT ATTGTTAATA TTTTTACTTTAGTCC Ssed_2743 3313495 - 3312896 - | GCN5-related N-acetyltransferase Ssed_2744 3314124 - 3313597 - | GCN5-related N-acetyltransferase Ssed_2745 3314183 - 3314812 + | methyl-accepting chemotaxis protein Ssed_2746 3314888 - 3315622 + | beta-lactamase domain-containing protein TERM 3323 3315695 - 3315640 - T 100 -17.2 -3.99275 | opp_overlap 3315641 3315654 3315655, overlap 3315641 3315654 CGATACAACACCAAA CTTAGCAATAAAAACGCCCGGTTTAT GAGA ATCAACCGGGCATTTTTATTGCCTAA TTATCAGCCGAAATA TERM 3324 3315695 - 3315641 - T 100 -19.1 -2.98842 | gap 1, opp_overlap 3315641 3315654 3315655, overlap 3315640 3315654 GATACAACACCAAAC TTA-GCAATAAAAACGCCCGGTTTAT GAGA ATCAACCGGGCATTTTTATTGCCTAA TTATCAGCCGAAATA TERM 3325 3315641 - 3315695 + T 100 -16.9 -3.28924 | gap 1, opp_overlap 3315640 3315641 3315654, overlap 3315654 3315655 GATACAACACCAAAC TTAG-CAATAAAAACGCCCGGTTTAT GAGA ATCAACCGGGCATTTTTATTGCCTAA TTATCAGCCGAAATA TERM 3326 3315654 - 3315681 + T 90 -8.4 -5.11063 | opp_overlap 3315654 3315640 3315641, overlap 3315641 3315655 ACTTAGCAATAAAAA CGCCCGGTTTAT GAGA ATCAACCGGGCA TTTTTATTGCCTAAT TERM 3327 3315681 - 3315654 - T 93 -10.6 -5.14163 | opp_overlap 3315641 3315654 3315655, overlap 3315640 3315641 ACTTAGCAATAAAAA CGCCCGGTTTAT GAGA ATCAACCGGGCA TTTTTATTGCCTAAT TERM 3328 3315655 - 3315680 + T 89 -11.9 -3.65554 | opp_overlap 3315654 3315640 3315641, overlap 3315654 3315641 CTTAGCAATAAAAAC GCCCGGTTTAT GAGA ATCAACCGGGC ATTTTTATTGCCTAA Ssed_2747 3316263 - 3315715 - | nitroreductase TERM 3329 3316361 - 3316331 - R 100 -17.8 -3.66497 | opp_overlap 3316337, overlap 3316332 3316337 TAACAAAGGTTTAAA CGTAAATCCCACCA AAA TGGTGGGATTTACA AAAATGTTATCATGA TERM 3330 3316360 - 3316332 - R 100 -19.1 -2.79175 | opp_overlap 3316337, overlap 3316331 3316337 AACAAAGGTTTAAAC GTAAATCCCACCA AAA TGGTGGGATTTAC AAAAATGTTATCATG TERM 3331 3316337 - 3316355 + r 95 -13.2 -3.55548 | opp_overlap 3316337 3316332 3316331 AGGTTTAAACGTAAA TCCCACCA AAA TGGTGGGA TTTACAAAAATGTTA TERM 3332 3316355 - 3316337 - R 100 -13.2 -3.84719 | opp_overlap 3316337, overlap 3316332 3316331 AGGTTTAAACGTAAA TCCCACCA AAA TGGTGGGA TTTACAAAAATGTTA Ssed_2748 3316989 - 3316393 - | DoxX family protein Ssed_2749 3318166 - 3317129 - | aminoglycoside phosphotransferase Ssed_2750 3318926 - 3318285 - | nicotinamide mononucleotide transporter PnuC TERM 3333 3318348 - 3318337 - G 77 -3 -5.24129 | GTTTTCCATAAAAAA TATC CCCC GATA GCCATACCGACATAG TERM 3334 3319002 - 3318969 - R 100 -13.5 -5.47821 | opp_overlap 3318973 AGTCATCTAAAAAAA TAAACTCACATTTAC CTGA GTAAATATGAGTTTA TCATGGCGTATCTTG TERM 3335 3318973 - 3318998 + r 75 -7.7 -3.97388 | opp_overlap 3318969 ATCTAAAAAAATAAA CTCACATTTAC CTGA GTAAATATGAG TTTATCATGGCGTAT Ssed_2751 3319289 - 3319029 - | hypothetical protein Ssed_2752 3321607 - 3319397 - | TonB-dependent receptor TERM 3336 3321861 - 3321877 + r 100 -12.3 -5.25803 | opp_overlap 3321861 ATTTTCATAAAAAAA CGTCAGC ATA GCTGACG TTTTTTGTAAAAATT TERM 3337 3321877 - 3321861 - R 100 -12.3 -5.61596 | opp_overlap 3321861 ATTTTCATAAAAAAA CGTCAGC ATA GCTGACG TTTTTTGTAAAAATT Ssed_2753 3322322 - 3321930 - | hypothetical protein Ssed_2754 3323380 - 3322376 - | hypothetical protein Ssed_2755 3323753 - 3323397 - | histidine triad (HIT) protein Ssed_2756 3324325 - 3324738 + | hypothetical protein TERM 3338 3324751 - 3324774 + T 89 -10.4 -4.1891 | gap 1 TAGCACCAACATCTC TGGGCGCAGTT TGA AACT-CGCCCA TTTATCTTGCCCAAA Ssed_2757 3325478 - 3325128 - | hypothetical protein Ssed_2758 3325838 - 3325485 - | hypothetical protein TERM 3339 3326055 - 3326014 - R 100 -19.1 -3.02144 | opp_overlap 3326023, overlap 3326023 TCACTTTTTTTAAGA CAAAAAAAAGCAGGAAAGT CATC ACTTTCCTGCTTTCTTCTG CTTAATACACACTAT TERM 3340 3326046 - 3326023 - R 100 -14 -6.10295 | opp_overlap 3326023, overlap 3326014 TTAAGACAAAAAAAA GCAGGAAAGT CATC ACTTTCCTGC TTTCTTCTGCTTAAT TERM 3341 3326023 - 3326046 + r 100 -14 -4.40132 | opp_overlap 3326023 3326014 TTAAGACAAAAAAAA GCAGGAAAGT CATC ACTTTCCTGC TTTCTTCTGCTTAAT Ssed_2759 3326707 - 3326072 - | response regulator receiver protein TERM 3342 3326422 - 3326401 - G 76 -2.1 -5.32882 | opp_overlap 3326403 3326403, overlap 3326403 GATCATTATAAAAAA CACCCGCCG TCAC CGAGGGGTT AATTAAAAATTTAAT Ssed_2760 3328206 - 3327028 - | TPR repeat-containing protein TERM 3343 3327167 - 3327190 + g 72 -6 -4.39002 | opp_overlap 3327170, overlap 3327169 3327170 TTGGCCAGATCAAAA TATGCCCTGT GGTA ATAGGGCGTG TTTTGTAGAAACTTT TERM 3344 3327190 - 3327202 + g 74 -2.7 -5.10497 | GTGGTAATAGGGCGT GTTTT GTA GAAAC TTTTTTAGGTAGATT TERM 3345 3327731 - 3327713 - G 71 -3 -4.99043 | overlap 3327714 3327716 TCTTCATAAAGAAAA GTACGGAC ATG GTCCGAAG TAACAGCAAGATCTG Ssed_2761 3328516 - 3328947 + | hypothetical protein Ssed_2762 3330955 - 3329135 - | serine/threonine protein kinase TERM 3346 3330834 - 3330810 - G 85 -11.5 -3.78775 | opp_overlap 3330809 3330808 3330824 GTGGTTAGCATCAAA CCATCGGGA ATACGGA TCCCGATGG CATCTTCATTTCTCG Ssed_2763 3332511 - 3331042 - | nitrite transporter Ssed_2764 3332847 - 3332512 - | nitrite reductase (NAD(P)H), small subunit Ssed_2765 3335516 - 3332844 - | nitrite reductase (NAD(P)H), large subunit TERM 3347 3335591 - 3335560 - R 100 -16 -5.61881 | gap 1, opp_overlap 3335560 CGTTAAAAACAAAAA GGCGCCATGCTCCTC TAT GAG-AACATGGCGCC ATTGCCGGTAAGATC Ssed_2766 3336543 - 3335947 - | response regulator TERM 3348 3336045 - 3336057 + g 75 -7.7 -4.27316 | CACTCAAGCCGTGAC GCTGA AGC TCAGC TTTTGCCTTCGCCAA Ssed_2767 3337788 - 3336616 - | glycosyl transferase family protein Ssed_2768 3338645 - 3337785 - | uroporphyrin-III C-methyltransferase TERM 3349 3338962 - 3338944 - R 100 -11.7 -5.03994 | opp_overlap 3338944 TCCCAGATACAAAAA CGCCAGC TCCAG GCTGGCG TTTTAAATAATTTCC TERM 3350 3338944 - 3338962 + r 100 -12.4 -4.26079 | opp_overlap 3338944 TCCCAGATACAAAAA CGCCAGCT CCA GGCTGGCG TTTTAAATAATTTCC TERM 3351 3339009 - 3338986 - R 74 -6.2 -4.37658 | gap 1, opp_overlap 3338987 3338989, overlap 3338987 3338989 AATTTCCGTAGAAAA CGACTTAAGTA TAT TACTTAAGT-G TTGATTCTGCAGTAC TERM 3352 3338989 - 3339007 + r 72 -9 -3.29593 | opp_overlap 3338986 3338987 3338989, overlap 3338987 TTCCGTAGAAAACGA CTTAAGTA TAT TACTTAAG TGTTGATTCTGCAGT TERM 3353 3339007 - 3338989 - R 70 -9 -3.1733 | opp_overlap 3338989 3338987, overlap 3338986 3338987 TTCCGTAGAAAACGA CTTAAGTA TAT TACTTAAG TGTTGATTCTGCAGT Ssed_2769 3339346 - 3338999 - | cytochrome c3 TERM 3354 3339690 - 3339673 - R 100 -12.7 -4.87803 | opp_overlap 3339673 TATGGCCAAAGAAAA CGGGAGC CAAG GCTCCCG TTTATTCTTTATTGG TERM 3355 3339673 - 3339690 + r 100 -12.7 -4.67968 | opp_overlap 3339673 TATGGCCAAAGAAAA CGGGAGC CAAG GCTCCCG TTTATTCTTTATTGG Ssed_2770 3340603 - 3339740 - | heat shock protein HtpX TERM 3356 3341353 - 3341365 + G 71 -9.1 -3.61178 | CTCCTTTAATAGCCT GGGGA TAC TCCCC TTTCAACTCAATCCA Ssed_2771 3340883 - 3341626 + | peptidase E TERM 3357 3341665 - 3341646 - T 100 -12.2 -5.64421 | opp_overlap 3341646 3341664 ACCGGAAATAAAAAA GCGCATTC GGAT GAATGCGC TTTAGAGGCTTTCTG TERM 3358 3341646 - 3341665 + T 89 -12.2 -3.60074 | opp_overlap 3341646, overlap 3341664 ACCGGAAATAAAAAA GCGCATTC GGAT GAATGCGC TTTAGAGGCTTTCTG Ssed_2772 3343692 - 3341698 - | putative 5'-nucleotidase TERM 3359 3343884 - 3343870 - R 73 -5.8 -4.51743 | TTAGTATCAAAGAAA TGATTT TTA AAATCA AAGAGAAATAAAAAC Ssed_2773 3344917 - 3344237 - | dethiobiotin synthase Ssed_2774 3345728 - 3344928 - | biotin biosynthesis protein BioC TERM 3360 3345814 - 3345797 - R 70 -8.4 -3.34895 | opp_overlap 3345810 CTCAGTCTTAACCAA GCGCCT GGGTTA AGGCGC TGACGAGCCTGTCTA Ssed_2775 3346979 - 3345789 - | 8-amino-7-oxononanoate synthase Ssed_2776 3348072 - 3347008 - | biotin synthase TERM 3361 3349370 - 3349349 - g 85 -12.3 -3.2794 | opp_overlap 3349339, overlap 3349363 TGTTATCGAGATGAA CTCGACGGT GAAC ACCGCCGAG CTTCAGCAGGAGTTT Ssed_2777 3348183 - 3349550 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 3362 3349565 - 3349588 + F 91 -11 -4.56597 | opp_overlap 3349558 3349565 ATGGATAACAGCAGA GCCGGGTGAC TGTC GTTACCTGGC TTTTTAAAAGAACAG Ssed_2778 3349903 - 3351261 + | gluconate transporter TERM 3363 3351281 - 3351321 + F 81 -11.4 -3.07816 | gap 2, opp_overlap 3351280 3351277 3351281, overlap 3351290 TTTATTAGACATAAC GCCGAGTTTCTGGATACCCG TTA TGGGTATTCAGAAA--CGGC TTACATGACTCCCCC TERM 3364 3352070 - 3352060 - g 88 -8.2 -4.82901 | TTCGGGCCACAAAAA GGCG CCA CGCC AGAGATGGTCGTCAC Ssed_2779 3351379 - 3352563 + | glycerate kinase Ssed_2780 3352760 - 3354412 + | pyridoxal-dependent decarboxylase Ssed_2781 3354936 - 3354562 - | hypothetical protein Ssed_2782 3355248 - 3355006 - | hypothetical protein TERM 3365 3355732 - 3355716 - g 85 -10.9 -3.95022 | GTCACGAACATCAAA TCGGCTT TAC AAGCCGA GCTGACAACGTTCAC TERM 3366 3357480 - 3357464 - g 71 -6.5 -4.1899 | GGAGCTCACTCAAAA CGGCG TAGAAGC CGCCG AGAGCACTCATAACC Ssed_2783 3355479 - 3357551 + | methyl-accepting chemotaxisprotein TERM 3367 3357624 - 3357645 + T 93 -7.3 -5.4833 | opp_overlap 3357624 TAAAACAAAGACAAA GGAAGAGGT TTAA GCTTCTTCC TTTTTTATTACCTCC Ssed_2784 3358990 - 3357680 - | hypothetical protein Ssed_2785 3359800 - 3359111 - | helix-turn-helix, type 11 domain-containing protein TERM 3368 3359879 - 3359843 - R 100 -13.1 -3.9122 | overlap 3359845 CATCTTCCCAAACAA GAGAGCCAAGTTCAATC TGA GATTAAACCCGGCTCGC AACGTCTGTCATTTG TERM 3369 3359877 - 3359845 - R 100 -14.3 -3.54488 | overlap 3359843 TCTTCCCAAACAAGA GAGCCAAGTTCAATC TGA GATTAAACCCGGCTC GCAACGTCTGTCATT Ssed_2786 3360394 - 3359954 - | transcription activator, effector binding Ssed_2787 3360836 - 3360453 - | glyoxalase family protein TERM 3370 3360919 - 3360876 - R 71 -6.7 -3.99775 | opp_overlap 3360884, overlap 3360878 ACTCACCAACAAGAA TACGCCCACCCTACTGACA GCGTAG TGTCAGTAGGGTTTTCGAA TAATAAAAGTGGTTA TERM 3371 3360917 - 3360878 - R 74 -9.3 -3.58505 | opp_overlap 3360884, overlap 3360876 TCACCAACAAGAATA CGCCCACCCTACTGACA GCGTAG TGTCAGTAGGGTTTTCG AATAATAAAAGTGGT TERM 3372 3360884 - 3360911 + r 100 -14.3 -4.15565 | opp_overlap 3360878 3360876 ACAAGAATACGCCCA CCCTACTGACA GCGTAG TGTCAGTAGGG TTTTCGAATAATAAA Ssed_2788 3362429 - 3360960 - | hypothetical protein Ssed_2789 3363223 - 3362558 - | hypothetical protein TERM 3373 3363042 - 3363031 - G 70 -2.2 -4.89852 | overlap 3363040 GCACAGCCAGAAAAA TCCC AAAT AGGA TGTACATCCCCAAGT Ssed_2790 3363468 - 3364202 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase Ssed_2791 3364202 - 3366622 + | hypothetical protein Ssed_2792 3367230 - 3366625 - | ribosomal protein N-acetylase-like protein TERM 3374 3367220 - 3367208 - G 78 -6.2 -4.71426 | opp_overlap 3367208 3367214 CCTGTATCAATAAAA GGCC GCCCT GGCC TTAATGGCATAGGTT Ssed_2793 3367866 - 3367234 - | putative chloramphenicol acetyltransferase Ssed_2794 3368015 - 3368560 + | MerR family transcriptional regulator Ssed_2795 3369247 - 3368711 - | acetyltransferase TERM 3375 3369689 - 3369656 - R 90 -13.4 -2.86432 | CCTAACACCAGCATA TTTGCAGTGGTCAA TATGAC TTGACCACTACAAA ATAACACTAACGATT Ssed_2796 3376164 - 3369703 - | fibronectin type III domain-containing protein TERM 3376 3370387 - 3370365 - G 71 -2.6 -4.94972 | opp_overlap 3370379, overlap 3370368 3370371 TAGCAGAAGCAAAAA TCACAACCCC ACC AGGGTCGAAA ATCATCCCATTTGCT TERM 3377 3372438 - 3372427 - G 72 -5.8 -4.32951 | opp_overlap 3372427, overlap 3372423 ATCGGAATCAACAAA GCCA TCGT TGGC TTTAAATGTGAAACT Ssed_2797 3377355 - 3376978 - | hypothetical protein TERM 3378 3377604 - 3377617 + r 75 -9.5 -3.32963 | opp_overlap 3377595 GAGCAAGTGGTGCAA CCCCG GTGG CGGGG TTATCGGCTAAACCT Ssed_2798 3379644 - 3377584 - | aspartate carbamoyltransferase Ssed_2799 3381884 - 3379680 - | nitrate reductase TERM 3379 3380794 - 3380782 - G 75 -10.5 -3.3785 | TCAAGGTAGCGATAA CCGGG CAG CCCGG AGCAGGATGACCATT TERM 3380 3382368 - 3382345 - g 73 -2.4 -5.05228 | AGGAAACGACAAAAA TGTTCCCAAC GCCG GATGAAAACA TGGAGCAGCACATCT Ssed_2800 3382164 - 3382751 + | ecotin precursor TERM 3381 3382741 - 3382728 - f 73 -6.7 -4.23892 | TTCAACTATTCAAAA TCAGC TGTA GCTGA AAATAGTTAACGGTC TERM 3382 3382839 - 3382811 - f 100 -17.7 -4.01158 | opp_overlap 3382816, overlap 3382816 AACGCGATTAAATAA TCAAAGCCAAGAT AAC ATCTTGGCTTTGA ACATCATGGTAAATA TERM 3383 3382816 - 3382834 + F 89 -11.8 -3.58522 | opp_overlap 3382816 3382811 GATTAAATAATCAAA GCCAAGAT AAC ATCTTGGC TTTGAACATCATGGT TERM 3384 3382834 - 3382816 - f 95 -11.8 -4.16371 | opp_overlap 3382816, overlap 3382811 GATTAAATAATCAAA GCCAAGAT AAC ATCTTGGC TTTGAACATCATGGT Ssed_2801 3383011 - 3383433 + | putative lipoprotein Ssed_2802 3383966 - 3385231 + | cytosine permease Ssed_2803 3385242 - 3386537 + | cytosine deaminase Ssed_2804 3388453 - 3386633 - | anaerobic ribonucleoside triphosphate reductase TERM 3385 3386921 - 3386933 + g 71 -6.9 -4.2679 | TATCTTGAAGTACTG CTCGG GAT CCGGG TTTTCGTCCAGATTC TERM 3386 3388474 - 3388494 + r 70 -2.7 -5.09259 | overlap 3388466 3388463 GATATCCTTAATCGT TAATGAATT TAT AATTAATTA TTTTATTTTGAGCTA Ssed_2805 3388918 - 3388466 - | hypothetical protein TERM 3387 3389587 - 3389576 - g 71 -4.4 -4.80178 | opp_overlap 3389586 CAGCAACCAACAAAA CCAA GGCA TTGG CGCTAAACTGTTGGC Ssed_2806 3389301 - 3389792 + | GCN5-related N-acetyltransferase Ssed_2807 3389880 - 3390125 + | hypothetical protein TERM 3388 3390137 - 3390116 - T 86 -9.4 -4.0075 | opp_overlap 3390116, overlap 3390131 ATCGAAGCAAGTAAA GCCCCGCT GATTTA AGCGGGAC TATAGTCCTCACCCA Ssed_2808 3390685 - 3390194 - | hypothetical protein TERM 3389 3390418 - 3390397 - G 77 -10.2 -3.59202 | TATTGTCACAGATAA CTATCGGC ACGCAG GCCGATAG CGCTTGAATAAACCC TERM 3390 3390533 - 3390523 - G 73 -2.4 -5.0133 | opp_overlap 3390525, overlap 3390525 TATCGGTTGAAAAAA GCCC CGA GCGC CGAACCTTGTCGGCG Ssed_2809 3391461 - 3390685 - | NAD-dependent deacetylase Ssed_2810 3392046 - 3392477 + | ferric uptake regulator TERM 3391 3392551 - 3392565 + T 100 -7.1 -5.76633 | opp_overlap 3392551 CTTGAAAGTTAAAAA CCAGC TTATT GCTGG TTTTTTTGTGTCTGA TERM 3392 3392565 - 3392551 - T 83 -7.1 -4.81249 | opp_overlap 3392551 CTTGAAAGTTAAAAA CCAGC TTATT GCTGG TTTTTTTGTGTCTGA TERM 3393 3392616 - 3392588 - T 100 -14.7 -3.12351 | opp_overlap 3392595, overlap 3392595 GTGTCTGATAGCTAA CAAAAAAGGCGCC AAA GGCGCCTTCTTTA AACGAGTAATTAAAA TERM 3394 3392595 - 3392609 + T 93 -12.8 -3.9122 | opp_overlap 3392595 3392588 ATAGCTAACAAAAAA GGCGCC AAA GGCGCC TTCTTTAAACGAGTA TERM 3395 3392609 - 3392595 - T 100 -12.8 -5.49234 | opp_overlap 3392595, overlap 3392588 ATAGCTAACAAAAAA GGCGCC AAA GGCGCC TTCTTTAAACGAGTA Ssed_2811 3393504 - 3392632 - | succinyl-CoA synthetase, alpha subunit Ssed_2812 3394670 - 3393504 - | succinyl-CoA synthetase subunit beta Ssed_2813 3395971 - 3394784 - | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase Ssed_2814 3398823 - 3396001 - | alpha-ketoglutarate decarboxylase TERM 3396 3398903 - 3398870 - R 76 -9.1 -3.64236 | gap 1 AGCCAAAGTCTTAAA TGTGCA-CTCTTTGAC TTA ATCAAAGAGGTACACA ATCATACGGTAATTC TERM 3397 3398958 - 3398931 - R 100 -12.8 -4.52589 | overlap 3398946 3398956 TTCCTTTACATAAAA GAGCCACTTCCC AAAT GAGAAGTGACTC AATCCGAGCTATATT Ssed_2815 3399710 - 3399003 - | succinate dehydrogenase iron-sulfur subunit Ssed_2816 3401487 - 3399721 - | succinate dehydrogenase flavoprotein subunit TERM 3398 3400513 - 3400523 + g 74 -6.8 -4.41616 | opp_overlap 3400511 CACACCCGGAAGACG CGCT TCG AGCG TTTCTTTACCCAGAT TERM 3399 3401141 - 3401155 + g 71 -7.2 -4.13767 | overlap 3401126 3401122 CCGCCGAAAGGTCGT TGGTAA ATT TTACCA TTTTCGAATCGAGAG Ssed_2817 3401835 - 3401488 - | putative succinate dehydrogenase, hydrophobic subunit TERM 3400 3401816 - 3401791 - G 73 -5.3 -4.52415 | opp_overlap 3401791 3401802 ACGTATAAGAATAAA GTCATGGACAC CGCT GCGACCAAGAC TTGCTGCGTTAGTTA Ssed_2818 3402203 - 3401829 - | succinate dehydrogenase, cytochrome b subunit TERM 3401 3402321 - 3402310 - H 70 -3 -5.07652 | CTGCGCAAAAGAAAA GTTT AAAC AAAC GATTAACAATTTAGA TERM 3402 3402972 - 3402962 - g 82 -5.4 -5.07567 | TCATACTGTAAAAAA CCAT ACT ATGG TGAACGAACAGCTTG Ssed_2819 3402633 - 3403919 + | type II citrate synthase TERM 3403 3403975 - 3403959 - f 100 -12.3 -5.24449 | opp_overlap 3403959 TAGAAACTGAAAAAA GGCACTC ATC GAGTGCC TTTTTTGTATCTGGT TERM 3404 3403959 - 3403975 + F 100 -12.3 -5.43414 | opp_overlap 3403959 TAGAAACTGAAAAAA GGCACTC ATC GAGTGCC TTTTTTGTATCTGGT Ssed_2820 3404485 - 3405576 + | RND family efflux transporter MFP subunit Ssed_2821 3405590 - 3408853 + | acriflavin resistance protein TERM 3405 3409345 - 3409326 - g 80 -12.2 -2.82623 | opp_overlap 3409312 3409332, overlap 3409323 TCTCCTCGACAAGCA GCTCAAGC GTCC GCTTGAGC GTGTCGAGGGCGTGT Ssed_2822 3408850 - 3411933 + | acriflavin resistance protein TERM 3406 3411965 - 3411980 + F 93 -6.8 -5.46657 | opp_overlap 3411965 3411960 ATGAAGAGGATAAAA GGCTGC GAGA GTAGCC TTTTTTATTGCCGTA Ssed_2823 3412072 - 3412935 + | beta-lactamase domain-containing protein TERM 3407 3412987 - 3412972 - T 87 -6.1 -5.24799 | opp_overlap 3412966 3412972, overlap 3412966 TTATAAATACAAAAA CGCCA TCAAAG TGGCG TTTTTCTTATGACCT TERM 3408 3412972 - 3412987 + T 89 -6.8 -5.19328 | opp_overlap 3412972 3412966, overlap 3412966 TTATAAATACAAAAA CGCCAT CAAA GTGGCG TTTTTCTTATGACCT Ssed_2824 3413226 - 3413044 - | hypothetical protein Ssed_2825 3414272 - 3413259 - | tetraacyldisaccharide 4'-kinase TERM 3409 3414236 - 3414209 - G 100 -5.7 -5.63374 | gap 1, opp_overlap 3414209 TTAACAGCAAAAAAA GGCC-TTTAGAC TGAGT GTCTAAAAAGCC TTTCGGATACCATAA Ssed_2826 3416087 - 3414273 - | ABC transporter, ATP-binding protein MsbA Ssed_2827 3418423 - 3416120 - | DNA internalization-related competence protein ComEC/Rec2 TERM 3410 3416402 - 3416424 + g 79 -9.9 -3.96148 | GGTTCTGCTTCCATG GTGAGGTGC GATAA GCACTTCAC TTTGTAATGACAAAC TERM 3411 3417462 - 3417440 - G 78 -6.2 -4.6902 | CGATAAGGCTAAAAA TGAGAGCCAA AAA CCGGCACTCA AACAGCAGAAAGGGT TERM 3412 3418089 - 3418100 + g 74 -3 -5.03715 | GGTGCTTTCTTCCAA CTTA TTCG TAAG TTTTTTGACAATAAT Ssed_2828 3418482 - 3418961 + | hypothetical protein TERM 3413 3419102 - 3419070 - T 70 -9.2 -3.25823 | gap 1, opp_overlap 3419070 TGCGGGGGAGAGGAA TGCGGGAGCATCACA CAGA TGTGACGC-CCCGAA TTATCAATCTTCTAT Ssed_2829 3420385 - 3419126 - | LolC/E family lipoprotein releasing system, transmembrane protein Ssed_2830 3421077 - 3420382 - | lipoprotein releasing system, ATP-binding protein TERM 3414 3420538 - 3420528 - G 73 -8.2 -3.91032 | GAATCAGTTCATAAA CGGC TTC GCCG CTACTGGCATCCAGA Ssed_2831 3422453 - 3421203 - | LolC/E family lipoprotein releasing system, transmembrane protein TERM 3415 3421583 - 3421573 - G 71 -8.2 -3.73414 | GAGACGATATTGAAA GCCG CAA CGGC AATAATAAGGCTCAG TERM 3416 3422036 - 3422050 + g 71 -7.2 -4.01047 | overlap 3422024 TATCGAAGCTGCCAT TGAAAC TTC GTTTCA TTGTTCTTAATAATT TERM 3417 3422535 - 3422519 - H 89 -4.4 -5.65177 | opp_overlap 3422519 ATAGCTACAAAAAAA CAAGAG GAAAT CCCTTG TTCACTGATTCAACG Ssed_2832 3422533 - 3423138 + | hypothetical protein TERM 3418 3423329 - 3423315 - g 71 -4.2 -4.77036 | CGCCAGCAGTAAAAA GCGC AACCAGA GCGC AAACACTATTTACCT TERM 3419 3425671 - 3425661 - g 73 -5.4 -4.60487 | GATTATCGGTAAAAA CCTT TAT AAGG GAGTATGACGATACG TERM 3420 3426112 - 3426124 + G 82 -5.5 -5.06816 | opp_overlap 3426112, overlap 3426097 3426096 TGGCGCCTTAGAAGA TCTGG GCG CCGGA TTTTTATTGGCCACT Ssed_2833 3423275 - 3426748 + | transcription-repair coupling factor Ssed_2834 3426750 - 3427697 + | hypothetical protein TERM 3421 3427790 - 3427759 - T 82 -11.6 -3.09919 | opp_overlap 3427757 ATAAAATCGTCAATA TTCTCGCCTTTAGC AAAC GCTAAAGGCGGGTA GGTCTAGTAAAAATA Ssed_2835 3428103 - 3427828 - | acylphosphatase TERM 3422 3428201 - 3428177 - R 100 -10.1 -5.85178 | opp_overlap 3428180 AATACGCAAAAAAAA CAGCTAACTAA GAG TTTGTTAGCTG CATCGGGCGACATAC TERM 3423 3428401 - 3428387 - R 79 -5 -5.04597 | ATTTACAGATAAAAA CAGTAT CTT ACACTG TAGTACCAGTTAGGT Ssed_2836 3429161 - 3428622 - | hypothetical protein Ssed_2837 3430255 - 3429254 - | beta-hexosaminidase TERM 3424 3431470 - 3431460 - g 77 -8.2 -4.15788 | opp_overlap 3431460 3431459 3431457 AACGGCTCCAACAAA CGGC GCG GCCG GTATTATTCCTGCGG TERM 3425 3431893 - 3431879 - g 70 -2.1 -4.95896 | overlap 3431870 ATAAAGTCATAAAAA CTATG ATGGA CACAG GTAAAGACATGAGAA Ssed_2838 3430588 - 3431964 + | L-serine ammonia-lyase TERM 3426 3432030 - 3432055 + T 84 -10.5 -3.91506 | opp_overlap 3432035, overlap 3432035 CACAGCTAAAAACAA AAAAACTCGCC AATT GGCGAGTTTTC TGTTTTTACAAATAC TERM 3427 3432035 - 3432050 + T 93 -10.4 -4.98672 | opp_overlap 3432035, overlap 3432030 CTAAAAACAAAAAAA CTCGCC AATT GGCGAG TTTTCTGTTTTTACA TERM 3428 3432050 - 3432035 - T 100 -10.4 -6.20267 | opp_overlap 3432035 3432030 CTAAAAACAAAAAAA CTCGCC AATT GGCGAG TTTTCTGTTTTTACA Ssed_2839 3433059 - 3432085 - | transcriptional regulator CysB Ssed_2840 3433283 - 3434056 + | hypothetical protein TERM 3429 3434079 - 3434094 + T 100 -9 -5.76633 | opp_overlap 3434079 CCCCTTCATTTAAAA CCAGCA TTTA TGCTGG TTTTTTTGTGTCTGA TERM 3430 3434094 - 3434079 - T 85 -9 -4.18018 | opp_overlap 3434079 CCCCTTCATTTAAAA CCAGCA TTTA TGCTGG TTTTTTTGTGTCTGA TERM 3431 3434295 - 3434314 + T 73 -7.8 -3.86202 | opp_overlap 3434295 TCCTACATAAAAAAA GCCCCGAT ACAG ATCGAGGC TTTCATGTGATCAAG TERM 3432 3434314 - 3434295 - T 100 -10 -5.71712 | opp_overlap 3434295 TCCTACATAAAAAAA GCCCCGAT ACAG ATCGAGGC TTTCATGTGATCAAG TERM 3433 3434331 - 3434357 + T 76 -3.1 -5.28983 | gap 1, opp_overlap 3434331 3434337, overlap 3434337 TTCATGTGATCAAGA GTAAAC-GCTAA TCTA TTAGCTGATTAC TTTTTCTCTTTTGGC Ssed_2841 3437023 - 3434354 - | DNA topoisomerase I Ssed_2842 3437553 - 3438890 + | succinylarginine dihydrolase TERM 3434 3438930 - 3438948 + T 100 -13.2 -5.45652 | opp_overlap 3438930 ACGGCCAATAAAAAA CCCAAGGT GCT ACCTTGGG TTTTTTATTGCAACT TERM 3435 3438948 - 3438930 - T 100 -13.2 -5.45652 | opp_overlap 3438930 ACGGCCAATAAAAAA CCCAAGGT GCT ACCTTGGG TTTTTTATTGCAACT Ssed_2843 3441485 - 3438969 - | Ig domain-containing protein TERM 3436 3441368 - 3441399 + g 72 -10.8 -2.64422 | opp_overlap 3441362 CTAACTCAACTGTAA TGGTTGCGGGGGGA GTAG TCCCTCCACCACCA TCATCTACGATGTCT TERM 3437 3441740 - 3441725 - g 72 -6.1 -4.34223 | AACTCAAGCAAGAAA GCTCG GATTGA CGAGC AAAATCCTTATCGGT TERM 3438 3442679 - 3442695 + G 70 -9.5 -3.26319 | TGTCTTTATCGCACA GGTCTAT GGC ATAGACC TTACTATCACCGATT Ssed_2844 3441702 - 3443012 + | sodium:dicarboxylate symporter TERM 3439 3443063 - 3443099 + T 100 -16.2 -5.1675 | gap 1, opp_overlap 3443072, overlap 3443072 ATAGCATCAGCTAGG CATAAAAAATGGCGTCC AATT GGACGCCATTTTTT-TG TTTTTTACTACATAC TERM 3440 3443072 - 3443091 + T 100 -13.6 -6.28401 | opp_overlap 3443072, overlap 3443063 GCTAGGCATAAAAAA TGGCGTCC AATT GGACGCCA TTTTTTTGTTTTTTA TERM 3441 3443091 - 3443072 - T 100 -13.6 -5.28176 | opp_overlap 3443063 3443072 GCTAGGCATAAAAAA TGGCGTCC AATT GGACGCCA TTTTTTTGTTTTTTA Ssed_2845 3444465 - 3443161 - | inosine kinase TERM 3442 3444105 - 3444082 - G 74 -11 -3.0682 | opp_overlap 3444080 3444078 GGTATTACACAGATA GCGGTAGGCA TAAC TGCCTACCTC AATATTATTGCTCAT TERM 3443 3444578 - 3444536 - R 70 -7.9 -3.75479 | gap 1, overlap 3444539 TAAAAGGCAACACAA CCACT-ATATTGACCCTCGG CGTG CTGAAGGCCAATATAAATGG CGGCAGATCCTAACA Ssed_2846 3445649 - 3444642 - | ferrochelatase TERM 3444 3445765 - 3445750 - R 100 -6.8 -5.63504 | opp_overlap 3445750 AACCCCATAAAAAAA GCCCAC TTAA GTGAGC TTTTTAAAATATGAG Ssed_2847 3446472 - 3445828 - | nucleoside-triphosphate--adenylate kinase TERM 3445 3446537 - 3446549 + r 77 -7.7 -4.22948 | overlap 3446510 TCGCACAATTGGCCG CCCTT TTG AAGGG TTTTGAATGAGTTTT Ssed_2848 3447516 - 3446671 - | thioredoxin domain-containing protein Ssed_2849 3449556 - 3447640 - | heat shock protein 90 TERM 3446 3447694 - 3447708 + g 73 -5.6 -4.57073 | opp_overlap 3447686, overlap 3447696 AATGAAGGCCGAAGG GTCAGC TAA GCTGCC TTTTTCAGAGAGCTG TERM 3447 3449705 - 3449681 - R 100 -9.3 -6.14618 | opp_overlap 3449681 GACAAAACAAAAAAA CCAGCGTCTGC ATA ACAAACACTGG TATTCGATTCGGTTT Ssed_2850 3450352 - 3449753 - | recombination protein RecR Ssed_2851 3450694 - 3450365 - | hypothetical protein Ssed_2852 3453646 - 3450779 - | DNA-directed DNA polymerase TERM 3448 3453737 - 3453726 - R 75 -5.8 -4.66609 | CATGCCATGCAAAAA CTCG CTAC CGAG GAACATTTTTACGGA Ssed_2853 3454310 - 3453756 - | adenine phosphoribosyltransferase TERM 3449 3454382 - 3454352 - R 82 -4 -5.42259 | opp_overlap 3454355 TGACTTGTAAAAAAA TCGGGGTAAAGC TTAAGCC GCTTTACCATGA GTTGCAACAAACTCT Ssed_2854 3454945 - 3454526 - | hypothetical protein Ssed_2855 3455619 - 3455500 - | hypothetical protein Ssed_2856 3456523 - 3455780 - | hypothetical protein Ssed_2857 3457359 - 3456523 - | hypothetical protein TERM 3450 3457467 - 3457432 - R 100 -18.6 -3.5525 | opp_overlap 3457437 3457441, overlap 3457437 ATATACCCGTTTAAA GATAATTAAGGCCGGT TAAA ACCAGCCTTAATTATC TCAACAGAACTCACC TERM 3451 3457462 - 3457437 - R 93 -12.7 -3.81488 | opp_overlap 3457437 3457441, overlap 3457432 CCCGTTTAAAGATAA TTAAGGCCGGT TAAA ACCAGCCTTAA TTATCTCAACAGAAC TERM 3452 3457437 - 3457462 + r 79 -10.5 -3.48276 | opp_overlap 3457437 3457432, overlap 3457441 CCCGTTTAAAGATAA TTAAGGCCGGT TAAA ACCAGCCTTAA TTATCTCAACAGAAC Ssed_2858 3458078 - 3457533 - | hypothetical protein TERM 3453 3458901 - 3458889 - g 78 -9.1 -4.09685 | CTGGATGGCCGAAAA TGCCC TTA GGGCA GTAGAGCTGGGCTCT Ssed_2859 3458650 - 3459576 + | dihydrouridine synthase, DuS Ssed_2860 3459794 - 3460150 + | TraR/DksA family transcriptional regulator TERM 3454 3460256 - 3460285 + T 71 -9.4 -2.78596 | opp_overlap 3460262, overlap 3460262 TTATAATTGCTGCAC AAAAAAGTCGGC GTTTAA GCCGACTTTTTA TCTGGTAACGAGCTC TERM 3455 3460279 - 3460262 - T 93 -8.4 -5.24129 | opp_overlap 3460256 3460262 TTGCTGCACAAAAAA GTCGGC GTTTAA GCCGAC TTTTTATCTGGTAAC TERM 3456 3460262 - 3460279 + T 90 -8.4 -5.00895 | opp_overlap 3460262, overlap 3460256 TTGCTGCACAAAAAA GTCGGC GTTTAA GCCGAC TTTTTATCTGGTAAC Ssed_2861 3462924 - 3460303 - | TonB-dependent receptor TERM 3457 3462659 - 3462671 + g 72 -10.5 -2.93623 | overlap 3462657 GGATTAGTCATCGCG CCGCC AGT GGCGG TCATCTTTTGCAGGA TERM 3458 3463787 - 3463802 + r 88 -9 -4.63218 | opp_overlap 3463787 ATCAGGCAAAAAAAA GAAGCC ATCA GGCTTC TTTTCTTCACACACA TERM 3459 3463802 - 3463787 - R 100 -9 -5.82316 | opp_overlap 3463787 ATCAGGCAAAAAAAA GAAGCC ATCA GGCTTC TTTTCTTCACACACA Ssed_2862 3464255 - 3463824 - | nucleoside-diphosphate kinase TERM 3460 3464265 - 3464281 + r 71 -3.7 -4.98531 | overlap 3464272 AGCCATGTCTAGCTT CCTTTTT TTA AAACAGG TTTTTAATTTGCGCG Ssed_2863 3464789 - 3464544 - | hypothetical protein TERM 3461 3464838 - 3464811 - R 100 -17.2 -5.52079 | opp_overlap 3464811 AGACTAAAATAAAAA GGGCAATAGCAT ACGA ATGCTATTGCCC TTTTTAAAGCCGGTT TERM 3462 3464811 - 3464838 + r 100 -17.2 -4.57341 | opp_overlap 3464811 AGACTAAAATAAAAA GGGCAATAGCAT ACGA ATGCTATTGCCC TTTTTAAAGCCGGTT Ssed_2864 3466137 - 3464986 - | two-component response regulator Ssed_2865 3472750 - 3466109 - | Signal transduction histidine kinase-like protein TERM 3463 3468687 - 3468648 - GR 80 -8 -4.39166 | opp_overlap 3468647 TTCCACAGAGTAAAA CGATAGTCATTTTTAACA TCCT TGGCAAAAACGGCTATCG GTAAATTCTCAAGCA TERM 3464 3468892 - 3468908 + gr 73 -5.1 -4.56597 | CTACCGCAAGATCCA TGTCGAA GGT TTCGCCA TTTTTACGCAGGCCG TERM 3465 3470336 - 3470306 - GR 85 -11.3 -3.28637 | opp_overlap 3470311, overlap 3470308 3470311 TAGTAAGACGATTAA TACAATGATGCTG GTGAG CAGCATCATTGAA TAAGTAAAAGCCCGA TERM 3466 3470334 - 3470308 - GR 93 -13.9 -3.20307 | opp_overlap 3470311, overlap 3470306 3470311 GTAAGACGATTAATA CAATGATGCTG GTGAG CAGCATCATTG AATAAGTAAAAGCCC TERM 3467 3470311 - 3470331 + gr 72 -9.8 -3.07816 | opp_overlap 3470308 3470306 3470311 AGACGATTAATACAA TGATGCTG GTGAG CAGCATCA TTGAATAAGTAAAAG TERM 3468 3470331 - 3470311 - GR 79 -9.8 -3.73144 | opp_overlap 3470311, overlap 3470308 3470306 AGACGATTAATACAA TGATGCTG GTGAG CAGCATCA TTGAATAAGTAAAAG TERM 3469 3472999 - 3472967 - R 90 -11.5 -4.11751 | opp_overlap 3472967 3472970, overlap 3472970 ACTAAGGCCGGAAAA TAATGAACACCTTAG TAT CTATAGTGTTCATTA TTTTAGCAAGTAAGG TERM 3470 3472967 - 3472999 + r 83 -9.3 -4.09685 | opp_overlap 3472967 3472970, overlap 3472970 ACTAAGGCCGGAAAA TAATGAACACCTTAG TAT CTATAGTGTTCATTA TTTTAGCAAGTAAGG TERM 3471 3472970 - 3472996 + r 73 -6.6 -4.17762 | opp_overlap 3472970 3472967, overlap 3472967 AAGGCCGGAAAATAA TGAACACCTTAG TAT CTATAGTGTTCA TTATTTTAGCAAGTA TERM 3472 3472996 - 3472970 - R 82 -8.8 -4.18164 | opp_overlap 3472967 3472970, overlap 3472967 AAGGCCGGAAAATAA TGAACACCTTAG TAT CTATAGTGTTCA TTATTTTAGCAAGTA TERM 3473 3473261 - 3473296 + r 76 -9.1 -3.66883 | opp_overlap 3473265, overlap 3473265 GTATTAAAACGAAAA AAAAGGGTGGTAACA TCAATC TGTTACCACCCTTAC TTTAAACTCTATTCA TERM 3474 3473292 - 3473265 - R 100 -14.3 -6.07969 | opp_overlap 3473261 3473265 TAAAACGAAAAAAAA GGGTGGTAACA TCAATC TGTTACCACCC TTACTTTAAACTCTA TERM 3475 3473265 - 3473292 + r 100 -14.3 -3.53745 | opp_overlap 3473265, overlap 3473261 TAAAACGAAAAAAAA GGGTGGTAACA TCAATC TGTTACCACCC TTACTTTAAACTCTA Ssed_2866 3473655 - 3473317 - | ferredoxin, 2Fe-2S Ssed_2867 3475535 - 3473673 - | chaperone protein HscA Ssed_2868 3476146 - 3475616 - | co-chaperone HscB Ssed_2869 3476489 - 3476166 - | iron-sulfur cluster assembly protein IscA Ssed_2870 3476887 - 3476504 - | scaffold protein Ssed_2871 3478138 - 3476924 - | cysteine desulfurase IscS TERM 3476 3478057 - 3478071 + g 77 -2.8 -5.24129 | opp_overlap 3478045, overlap 3478045 ATATGCCGTCCATAG TCATGC ACT GCATCA TTTTTTCTGCAACAC TERM 3477 3478200 - 3478190 - R 78 -2.6 -5.43621 | ACAAAGTACAAAAAA TTAT TTA ATAA TAACAAAGTTAACTT Ssed_2872 3478675 - 3478214 - | BadM/Rrf2 family transcriptional regulator TERM 3478 3478813 - 3478835 + r 83 -10.6 -3.70571 | opp_overlap 3478813, overlap 3478805 TGATTAGCAGAAAAA TACCCTGCCA CTT TGGTGGGGTA TTTAACCTGTTTCTA TERM 3479 3478835 - 3478813 - R 82 -6.2 -4.93296 | opp_overlap 3478805 3478813 TGATTAGCAGAAAAA TACCCTGCCA CTT TGGTGGGGTA TTTAACCTGTTTCTA Ssed_2873 3479715 - 3478894 - | Serine O-acetyltransferase TERM 3480 3479165 - 3479177 + g 71 -4.8 -4.5123 | TTAGCCATCTCAGTT CGTC GCTTA GACG TTTCTTTGCTGGCTT Ssed_2874 3480494 - 3479730 - | RNA methyltransferase Ssed_2875 3480844 - 3481647 + | inositol-phosphate phosphatase TERM 3481 3481696 - 3481677 - f 90 -10.8 -4.21471 | opp_overlap 3481677 ATTGTAAAATAAGAA GCCATCAT CACT ATGATGGC TTTTTTGTTTCTAAT TERM 3482 3481677 - 3481696 + F 100 -10.8 -5.73978 | opp_overlap 3481677 ATTGTAAAATAAGAA GCCATCAT CACT ATGATGGC TTTTTTGTTTCTAAT Ssed_2876 3481832 - 3483052 + | NnrS family protein Ssed_2877 3483351 - 3483755 + | phosphate-starvation-inducible E TERM 3483 3483794 - 3483776 - f 93 -10.3 -5.14965 | opp_overlap 3483776 ATTGGTATTAAAAAA CTCAGCC AAATA GGCTGAG TTTTTTTGCCTATAA TERM 3484 3483776 - 3483794 + F 100 -10.3 -5.50499 | opp_overlap 3483776 ATTGGTATTAAAAAA CTCAGCC AAATA GGCTGAG TTTTTTTGCCTATAA Ssed_2878 3483907 - 3484221 + | type IV pilus assembly PilZ Ssed_2879 3484322 - 3484990 + | hypothetical protein Ssed_2880 3484977 - 3485327 + | RepA domain-containing protein TERM 3485 3485373 - 3485350 - T 100 -15.4 -3.08464 | opp_overlap 3485350 TTAGTATTGAGCTAA TCGCAGTGAC CTCT GTCACTGCGA TTGTAAAACTGTATC TERM 3486 3485350 - 3485373 + T 100 -15.4 -3.32819 | opp_overlap 3485350 TTAGTATTGAGCTAA TCGCAGTGAC CTCT GTCACTGCGA TTGTAAAACTGTATC Ssed_2881 3485632 - 3485390 - | hypothetical protein Ssed_2882 3485795 - 3487471 + | signal transduction histidine kinase, LytS Ssed_2883 3487468 - 3488178 + | putative two-component response-regulatory protein YehT Ssed_2884 3488432 - 3489868 + | carbon starvation protein CstA TERM 3487 3489912 - 3489929 + T 95 -11.3 -4.86133 | opp_overlap 3489912 GTATAACGTTAAAAA GCCAGTC ATGA GACTGGC TTTTTGCTATATCTA TERM 3488 3489929 - 3489912 - T 95 -11.3 -4.6902 | opp_overlap 3489912 GTATAACGTTAAAAA GCCAGTC ATGA GACTGGC TTTTTGCTATATCTA Ssed_2885 3490495 - 3489956 - | YaeQ family protein Ssed_2886 3491510 - 3490599 - | precorrin-2 oxidase / ferrochelatase TERM 3489 3491125 - 3491111 - G 83 -7 -4.77036 | opp_overlap 3491116 GCTCACGAGCAAAAA CCGGAG CTG CACCGG CTGTACTGATCGCGA Ssed_2887 3491947 - 3491588 - | rhodanese-like protein Ssed_2888 3492334 - 3492017 - | hypothetical protein TERM 3490 3492499 - 3492512 + r 84 -8.1 -4.81249 | opp_overlap 3492491 3492499 CAAGACATAAAAAAA CCACC CTAA GGTGG TTTTTCAATTTAGCA TERM 3491 3492512 - 3492499 - R 100 -8.1 -5.80248 | opp_overlap 3492499, overlap 3492491 CAAGACATAAAAAAA CCACC CTAA GGTGG TTTTTCAATTTAGCA Ssed_2889 3493484 - 3492537 - | preprotein translocase subunit SecF Ssed_2890 3495347 - 3493497 - | preprotein translocase subunit SecD TERM 3492 3494247 - 3494262 + g 71 -9 -3.56727 | opp_overlap 3494241 3494238 GATGAACAAGGTTGC CATCGG CTTA CCGATG TTATCCTTAGTTACA TERM 3493 3494470 - 3494480 + g 88 -8.2 -4.7254 | overlap 3494460 CCACTTGCAGCGGCA GCCG CGT CGGC TTTTTCATCCACCAT TERM 3494 3495317 - 3495289 - G 73 -7.5 -4.15029 | overlap 3495294 ATTGCATAGAAAGAA CCAACGGCGATAA TGA TTATCACCATCAG GTTTTTCCACATTGG Ssed_2891 3495697 - 3495365 - | preprotein translocase subunit YajC TERM 3495 3495531 - 3495548 + g 93 -8.5 -5.00846 | ACTTCATCACCTTTA CCTAATG AGCC CATTAGG TTTTTGTGCTCTTTA Ssed_2892 3496860 - 3495727 - | queuine tRNA-ribosyltransferase TERM 3496 3497010 - 3496990 - R 100 -5.4 -5.87688 | opp_overlap 3496990 3496988 AGAAGTTAAAAAAAA CCCACC TCTTTAATG GGTGGG TATTTTAAACCAAAT Ssed_2893 3498070 - 3497033 - | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Ssed_2894 3498303 - 3498142 - | hypothetical protein Ssed_2895 3498464 - 3499057 + | hypothetical protein TERM 3497 3499072 - 3499101 + F 70 -8.7 -3.40299 | gap 1, opp_overlap 3499078, overlap 3499074 GTGCTCGGCTCGTAG C-AGTAAGCGAGAA AAC TCCTCGCTTACTCG TTCTCAATATGATCA TERM 3498 3499074 - 3499098 + F 80 -11.5 -2.85712 | opp_overlap 3499078, overlap 3499072 GCTCGGCTCGTAGCA GTAAGCGAGAA AAC TCCTCGCTTAC TCGTTCTCAATATGA Ssed_2896 3499151 - 3499807 + | pseudouridine synthase Ssed_2897 3500327 - 3499926 - | hypothetical protein TERM 3499 3500855 - 3500823 - R 95 -13.6 -3.4178 | gap 1, opp_overlap 3500827, overlap 3500827 AGCAGTGGAGCATAA GAGAGTTCCCGGAGC CAAT ACTCCGGGAACT-TC TATTAAGATTATATC TERM 3500 3500852 - 3500827 - R 100 -15.5 -3.20322 | opp_overlap 3500827, overlap 3500823 GTGGAGCATAAGAGA GTTCCCGGAGC CAAT ACTCCGGGAAC TTCTATTAAGATTAT TERM 3501 3500827 - 3500852 + r 100 -14.8 -3.6947 | opp_overlap 3500823 3500827 GTGGAGCATAAGAGA GTTCCCGGAG CCAATA CTCCGGGAAC TTCTATTAAGATTAT Ssed_2898 3502102 - 3500864 - | serine/threonine transporter SstT Ssed_2899 3503376 - 3502489 - | response regulator receiver modulated CheW protein Ssed_2900 3504993 - 3503470 - | phospholipase D/transphosphatidylase Ssed_2901 3505615 - 3505145 - | dual specificity protein phosphatase TERM 3502 3505703 - 3505661 - R 90 -8.6 -4.89852 | opp_overlap 3505670, overlap 3505663 3505670 TGACATTGATAAAAA CATTTCAAATATAAGGTGGC GCT GCCACCCTATATTTAACAAA TAAATCAGGGCTTTT TERM 3503 3505701 - 3505663 - R 100 -13.4 -4.06785 | opp_overlap 3505670, overlap 3505661 3505670 ACATTGATAAAAACA TTTCAAATATAAGGTGGC GCT GCCACCCTATATTTAACA AATAAATCAGGGCTT TERM 3504 3505670 - 3505694 + r 88 -11.5 -3.55761 | opp_overlap 3505670 3505663 3505661 TAAAAACATTTCAAA TATAAGGTGGC GCT GCCACCCTATA TTTAACAAATAAATC TERM 3505 3505694 - 3505670 - R 95 -13.7 -3.73294 | opp_overlap 3505670, overlap 3505663 3505661 TAAAAACATTTCAAA TATAAGGTGGC GCT GCCACCCTATA TTTAACAAATAAATC Ssed_2902 3507006 - 3505708 - | DEAD/DEAH box helicase domain-containing protein Ssed_2903 3507760 - 3507146 - | methylated-DNA--(protein)-cysteine S-methyltransferase Ssed_2904 3509265 - 3507757 - | AraC family transcriptional regulator TERM 3506 3509418 - 3509399 - H 72 -9.4 -3.07895 | opp_overlap 3509396 TTTATTTTTAAGATA TGCTAACA ACAG TGTTAGCA AAATATAATAATCAT TERM 3507 3510447 - 3510428 - g 71 -7.2 -4.08767 | gap 1, opp_overlap 3510430 CTCATTGTTTGAAAA CATCGG-CA CCG TGACCGATG GTATGAACACCTTAT Ssed_2905 3509445 - 3511274 + | ABC transporter-related protein TERM 3508 3511316 - 3511302 - T 83 -7.1 -4.81249 | opp_overlap 3511302 CTTTAAAGCTAAAAA CCACC TTTAG GGTGG TTTTTTCTCGACTAT TERM 3509 3511302 - 3511316 + T 91 -7.8 -5.26918 | opp_overlap 3511302 CTTTAAAGCTAAAAA CCACCT TTA GGGTGG TTTTTTCTCGACTAT TERM 3510 3511538 - 3511551 + T 73 -8.1 -3.91597 | opp_overlap 3511538 TCAGATACAAAAAAA CCACC CTAA GGTGG TTTCATGTCTCTCGT TERM 3511 3511551 - 3511538 - T 100 -8.1 -5.76633 | opp_overlap 3511538 TCAGATACAAAAAAA CCACC CTAA GGTGG TTTCATGTCTCTCGT TERM 3512 3511733 - 3511712 - T 70 -2.9 -5.12707 | opp_overlap 3511724, overlap 3511714 TGAAATTTTAAAAAA TGGTATCCC CAAG GGGATTCGA ACCCCTGTTACCGCC TERM 3513 3512087 - 3512101 + T 82 -8.6 -4.19238 | GTAGCGTTACATGGC GACTCA AGC TGAGTC TTTTCACATTCAACC TERM 3514 3512303 - 3512317 + T 82 -8.6 -4.19238 | GTAGCGTTACATGGC GACTCA AGC TGAGTC TTTTCACATTCAACC Ssed_2906 3515277 - 3513868 - | glutamyl-tRNA synthetase TERM 3515 3514838 - 3514849 + g 75 -5.8 -4.57073 | opp_overlap 3514835 3514838, overlap 3514835 TCAAATACTACACTA CCCT CTGT AGGG TTTTTGAAACGAATA TERM 3516 3515222 - 3515208 - G 73 -7.1 -4.29829 | ATAACCATGAATAAA GCGCT GTACG AGCGC CACCGACATGCAAAA Ssed_2907 3516874 - 3517101 + | hypothetical protein TERM 3517 3517215 - 3517198 - f 90 -11.3 -4.04295 | TTAACTATAATTAAA TGGGTGG GTTT CCACCCA TCGACCTCTCCCCCC TERM 3518 3517563 - 3517552 - g 71 -4.4 -4.66163 | overlap 3517562 ACGCCCACTGAAAAA GCTT TTAA AAGC GACGGTACTCGCAGG TERM 3519 3517861 - 3517841 - g 91 -7.5 -5.21709 | opp_overlap 3517841 3517843, overlap 3517843 CGCTATACCAAAAAA CTGCAGATC TTC GACCTGCCG TTTCTATTTGAAAAT Ssed_2908 3517496 - 3518530 + | TRAP dicarboxylate transporter, DctP subunit TERM 3520 3518580 - 3518553 - f 79 -7 -4.61648 | overlap 3518555 3518568 AATAACAATAATAAA TAGGGCTGAG GTAAATCA CTCAGCCCTC ACTATATATTCAGAT TERM 3521 3518578 - 3518555 - f 83 -9.6 -3.88654 | overlap 3518553 3518568 TAACAATAATAAATA GGGCTGAG GTAAATCA CTCAGCCC TCACTATATATTCAG TERM 3522 3519282 - 3519268 - g 93 -2.8 -6.04953 | overlap 3519270 ACACAAACAAAAAAA TGGATG TTT CATCTA AAAGCCAAAATGAAA Ssed_2909 3518607 - 3519311 + | tripartite ATP-independent periplasmic transporter, DctQ component Ssed_2910 3519311 - 3520708 + | TRAP dicarboxylate transporter, DctM subunit Ssed_2911 3520824 - 3522665 + | ATPase domain-containing protein Ssed_2912 3522652 - 3524019 + | two component, sigma54 specific, Fis family transcriptional regulator Ssed_2913 3525350 - 3524067 - | major facilitator transporter TERM 3523 3524359 - 3524349 - G 75 -3.2 -5.06414 | TGCCGTTAATAAAAA TCCG ATA CAGA TAAAGCCGGTAGTAT TERM 3524 3525702 - 3525685 - g 81 -3.3 -5.41746 | overlap 3525686 AAGCGGGGAAAAAAA CTCAGCC TGAC GGCAGAA GGTGCGGCTCTGCAT Ssed_2914 3525505 - 3526392 + | LysR family transcriptional regulator TERM 3525 3526381 - 3526418 + T 85 -11.4 -3.43961 | opp_overlap 3526386 3526388, overlap 3526388 GTCGATTTTCTGATG CAGAACAGATAGGCTC ACACCA GAGCCTATCTTCTCTG TTCTAAATCTTCTGG TERM 3526 3526413 - 3526386 - T 70 -8.5 -3.35679 | opp_overlap 3526381 3526388, overlap 3526388 TTTTCTGATGCAGAA CAGATAGGCTC ACACCA GAGCCTATCTT CTCTGTTCTAAATCT TERM 3527 3526388 - 3526411 + T 83 -11.1 -3.7319 | opp_overlap 3526386 3526388, overlap 3526381 TTCTGATGCAGAACA GATAGGCTC ACACCA GAGCCTATC TTCTCTGTTCTAAAT TERM 3528 3526411 - 3526388 - T 79 -11.1 -3.24924 | opp_overlap 3526388 3526381, overlap 3526386 TTCTGATGCAGAACA GATAGGCTC ACACCA GAGCCTATC TTCTCTGTTCTAAAT Ssed_2915 3529528 - 3526421 - | acriflavin resistance protein TERM 3529 3529132 - 3529148 + g 75 -10.1 -3.34398 | opp_overlap 3529129 3529132 3529131, overlap 3529131 CGATATCGACAACAG GCTCGGC CCA GTCGAGC TCTTTAACAACAGGA Ssed_2916 3530874 - 3529525 - | RND family efflux transporter MFP subunit Ssed_2917 3531520 - 3530864 - | TetR family transcriptional regulator TERM 3530 3531242 - 3531259 + g 85 -2.6 -5.5762 | opp_overlap 3531242, overlap 3531248 GTAGGTCTGCATGAA GCTAGC CGGGCC GCTCGC TTTTTTCTCTTTAAT TERM 3531 3531986 - 3532013 + r 100 -15 -3.9398 | opp_overlap 3531990 CTTATTGCACTGGTA GTAATGCCGGCT GATT AGCTGGCATTAC TTTATACACTTATCA Ssed_2918 3533435 - 3532026 - | hypothetical protein Ssed_2919 3534572 - 3533607 - | LysR family transcriptional regulator Ssed_2920 3535151 - 3534696 - | hypothetical protein Ssed_2921 3535826 - 3535170 - | cytoplasmic chaperone TorD family protein TERM 3532 3535281 - 3535267 - G 74 -4.2 -4.84761 | ATACCGCGATAAAAA TCACTC TCG GCGTGA TGATGCATTAACTCG TERM 3533 3535881 - 3535860 - R 100 -17.3 -3.70919 | TGCAAATTTTAACAA GCGGCGTCC CAAA GGACGCCGC TAACGGATCAGACCT Ssed_2922 3536524 - 3535889 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_2923 3538969 - 3536537 - | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein TERM 3534 3537662 - 3537695 + g 75 -6.1 -4.5442 | opp_overlap 3537663 3537665 3537671, overlap 3537663 3537664 3537671 TTCGACAGCCTGCAA ATAGGTAAAGAAAGA GATC TCTTTCTTTACCGGA TTTTCTAGTTCCGCG TERM 3535 3537663 - 3537694 + g 73 -9.6 -3.3217 | opp_overlap 3537663 3537665 3537671, overlap 3537662 3537664 3537671 TCGACAGCCTGCAAA TAGGTAAAGAAAGA GATC TCTTTCTTTACCGG ATTTTCTAGTTCCGC TERM 3536 3537664 - 3537693 + g 72 -10.9 -2.5882 | opp_overlap 3537663 3537665 3537671, overlap 3537663 3537662 3537671 CGACAGCCTGCAAAT AGGTAAAGAAAGA GATC TCTTTCTTTACCG GATTTTCTAGTTCCG TERM 3537 3537692 - 3537665 - G 93 -14.4 -3.36073 | opp_overlap 3537664 3537663 3537662 3537671, overlap 3537663 3537671 GACAGCCTGCAAATA GGTAAAGAAAGA GATC TCTTTCTTTACC GGATTTTCTAGTTCC Ssed_2924 3541025 - 3539007 - | outer membrane protein TERM 3538 3540413 - 3540391 - G 71 -10.6 -2.79671 | opp_overlap 3540390 3540390, overlap 3540390 ACGGGAAGCCCAAAG TTGGTAGGCC GAG GGCTTACCAA GCTTGATGCCTGGTA Ssed_2925 3541988 - 3541041 - | cytochrome c family protein TERM 3539 3541785 - 3541800 + g 91 -6.8 -5.18726 | opp_overlap 3541784, overlap 3541779 TACGCCATCGAATAG CGCCAT AACA GTGGCG TTTTTCTTATGACAC Ssed_2926 3543645 - 3542980 - | response regulator receiver protein TERM 3540 3543574 - 3543561 - G 85 -8.1 -4.68545 | opp_overlap 3543560 AGTGAACAGACAAAA GCTCG GCGT CGAGC CCTTTATGGTTGAGG TERM 3541 3543679 - 3543703 + r 88 -11.5 -3.57462 | opp_overlap 3543681, overlap 3543681 TAAATGAGTATAAAA AAGGCCAATTC AAT GAATTGGCCTC TTTAAAACTACGATG TERM 3542 3543701 - 3543681 - R 100 -14.1 -5.33785 | opp_overlap 3543681 3543679 AATGAGTATAAAAAA GGCCAATTC AAT GAATTGGCC TCTTTAAAACTACGA TERM 3543 3543681 - 3543701 + r 100 -14.1 -3.36515 | opp_overlap 3543681, overlap 3543679 AATGAGTATAAAAAA GGCCAATTC AAT GAATTGGCC TCTTTAAAACTACGA Ssed_2927 3544709 - 3543723 - | fumarylacetoacetate (FAA) hydrolase Ssed_2928 3546486 - 3544948 - | transcriptional regulator, TyrR TERM 3544 3545141 - 3545129 - G 70 -7.7 -3.96216 | overlap 3545134 TGGTGATCGAAATAA CCGAA TCC TTCGG CGTAGGAGGGAAGCT TERM 3545 3545418 - 3545455 + g 78 -5.5 -4.87665 | opp_overlap 3545413 TACGATAGTAGAGAT CTTCTCTGAACTCTCCC GTTT GGCACAGTTCGGCGAGG TTTTTCTGAGTCGAA Ssed_2929 3547047 - 3546715 - | pterin-4-alpha-carbinolamine dehydratase Ssed_2930 3547904 - 3547107 - | phenylalanine 4-monooxygenase TERM 3546 3548131 - 3548153 + H 76 -7.1 -4.2008 | TAGGTAAGTTCACTA TTAACATGG CTTTT CCGTGTTAA TTTATTAAAATATGT Ssed_2931 3548201 - 3549121 + | UTP--glucose-1-phosphate uridylyltransferase Ssed_2932 3549121 - 3550134 + | UDP-glucose 4-epimerase Ssed_2933 3550253 - 3550741 + | ferredoxin-type protein NapF Ssed_2934 3550884 - 3551279 + | hypothetical protein TERM 3547 3551354 - 3551341 - T 79 -5.3 -5.03994 | CCTTACAGAGAAAAA TTCTG TGAA CAGAA AGCAGCGAACAAGGA Ssed_2935 3552119 - 3551442 - | hypothetical protein Ssed_2936 3552921 - 3552166 - | hypothetical protein Ssed_2937 3553850 - 3552960 - | fructokinase Ssed_2938 3554237 - 3555700 + | hypothetical protein TERM 3548 3555831 - 3555855 + T 74 -6.5 -4.48449 | gap 1, opp_overlap 3555831 3555830 3555833 GCTGGTTAAAAAATT GAGACTGAGC TCGAGT GC-CAGTCTC TTTCTCTTTTCCTAA TERM 3549 3555985 - 3556006 + T 70 -8.7 -3.28889 | opp_overlap 3555986, overlap 3555983 3555986 TCTTAGCTTTATAAA ACCTAGGAG CTAG CTCCTAGGC TCTTAATTAATCTAT TERM 3550 3556005 - 3555986 - T 95 -12.2 -4.38712 | opp_overlap 3555985 3555983 3555986 CTTAGCTTTATAAAA CCTAGGAG CTAG CTCCTAGG CTCTTAATTAATCTA TERM 3551 3555986 - 3556005 + T 81 -12.2 -2.5661 | opp_overlap 3555986, overlap 3555985 3555983 CTTAGCTTTATAAAA CCTAGGAG CTAG CTCCTAGG CTCTTAATTAATCTA Ssed_2939 3556776 - 3556036 - | putative hydrolase Ssed_2940 3558350 - 3556848 - | two component, sigma54 specific, Fis family transcriptional regulator Ssed_2941 3561925 - 3558416 - | putative PAS/PAC sensor protein TERM 3552 3561893 - 3561877 - G 71 -4.3 -4.74215 | opp_overlap 3561892 ATAGCAGCAATAAAA CGCCCTC GAT AAGTGCG ATACCGAGTACCGTT Ssed_2942 3562845 - 3561925 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 3553 3563570 - 3563599 + G 88 -11.5 -3.85698 | opp_overlap 3563564 3563570 CAAACTAAACATACA GTTATCGGCATTG AATC CGGTGCCGATGAC TTTCTGACGAAACCC Ssed_2943 3563255 - 3564667 + | response regulator receiver modulated serine phosphatase Ssed_2944 3564712 - 3565104 + | putative anti-sigma regulatory factor, serine/threonine protein kinase TERM 3554 3565152 - 3565139 - f 75 -9.5 -3.31726 | opp_overlap 3565122 3565150, overlap 3565137 GGCTTTGATATAAGA CCGGC TTTA GCCGG GAATCGCTCTCCCCG TERM 3555 3565427 - 3565414 - f 72 -9.5 -3.02263 | ATATCTTGTGTAAGA CCGGC TTTA GCCGG GAAGGATGATAACAA TERM 3556 3565703 - 3565690 - f 72 -9.5 -3.01791 | ATCTCTTGTGTAAGA CCGGC TTCA GCCGG GAAGGATGATAACAA Ssed_2945 3566021 - 3566362 + | anti-sigma-factor antagonist Ssed_2946 3566488 - 3567807 + | polysaccharide export protein TERM 3557 3567967 - 3567945 - g 77 -4.9 -4.96848 | GGGTGTATATAAAAA CAGCATTAG CGGCT CTAACACTG ATCTGGACACTAGCG Ssed_2947 3567842 - 3569251 + | hypothetical protein TERM 3558 3570081 - 3570096 + G 70 -7.6 -3.86733 | overlap 3570071 CCGTGCCACCTGTGT GGTATG TAAG CATACC TTCTTCCTGTTTCCT Ssed_2948 3569698 - 3570945 + | hypothetical protein Ssed_2949 3571540 - 3572907 + | polysaccharide biosynthesis protein TERM 3559 3573141 - 3573154 + G 70 -8.1 -3.89346 | opp_overlap 3573127 TTCGCCATGCCATCG GGCGA TACG TCGCC TTTATCGACTCCGAC Ssed_2950 3572897 - 3573940 + | glycosyl transferase family protein TERM 3560 3573995 - 3573982 - f 72 -9.5 -3.04461 | CAGTTATTTGTAAGA CCGGC TTTA GCCGG GAAAGGTGATAAGAA TERM 3561 3574091 - 3574078 - f 72 -9.5 -3.0814 | opp_overlap 3574084 AGCTATAGTGTAAGA CCGGC TTCA GCCGG GAAAGGTTTCGTGAA TERM 3562 3574084 - 3574120 + F 73 -9.5 -3.19936 | opp_overlap 3574078 AGTGTAAGACCGGCT TCAGCCGGGAAAGGTTT CGT GAACATTTCATGGCTGA TTCGATTCACTGATT TERM 3563 3574231 - 3574218 - f 72 -9.5 -3.08679 | opp_overlap 3574201 GGCTTTGATGTAAGA CCGGC TTTA GCCGG GAACCGCCCATCCCA TERM 3564 3576042 - 3576080 + G 77 -4.5 -4.90136 | overlap 3576045 AGCAGAAGACTAGGC TGCGGCGTTAAGCGGAT ATTAG ACCTGTTTGGCGCCTCA TTTTTACTCTTACTT Ssed_2951 3574488 - 3576638 + | WecB/TagA/CpsF family glycosyl transferase TERM 3565 3577424 - 3577405 - g 73 -7.8 -4.07885 | GATCCTTGGGGAAAA CGCTTGGA TAGA TCCCAGCG TCACCATGAAAAACT Ssed_2952 3576695 - 3578212 + | nucleotidyl transferase Ssed_2953 3578303 - 3578698 + | glycerol-3-phosphate cytidylyltransferase TERM 3566 3579695 - 3579706 + G 73 -2.2 -5.055 | ACCTGCTTTTATATC GGGT CCCA ATCC TTTTTTACCGCTTCA Ssed_2954 3578713 - 3580023 + | poly(glycerophosphate) glycerophosphotransferase Ssed_2955 3580920 - 3579994 - | glucose-1-phosphate thymidylyltransferase TERM 3567 3580030 - 3580043 + g 70 -9.5 -3.10056 | opp_overlap 3580021 CGACAATAGCCCTTC CCGGC TAAA GCCGG TCTTACATGGATCAT TERM 3568 3581011 - 3581026 + r 76 -4.7 -5.08601 | overlap 3581025 ACTCTGTAGGAGCGC GCTTC AGCCGC GAAGC TTTTTATTAACCTAA TERM 3569 3581052 - 3581065 + r 72 -9.5 -3.08679 | CCTAAAGAGCTATTC CCGGC TGAA GCCGG TCTTACATAAAAGCC Ssed_2956 3582060 - 3581095 - | acetyltransferase TERM 3570 3581163 - 3581185 + g 71 -10.4 -2.79968 | overlap 3581162 ATGCATTGATCCCTG CGGCGGCGGC CCT GCCCCCTCCG GTTTCGAATTGACTG TERM 3571 3582209 - 3582222 + r 72 -9.5 -3.08679 | TTTCATATCTTGTTC CCGGC TAAA GCCGG TCTTACATCAAAGCA Ssed_2957 3582950 - 3582264 - | adenylyl-sulfate kinase Ssed_2958 3583367 - 3583014 - | hypothetical protein Ssed_2959 3585583 - 3583856 - | TrkA domain-containing protein TERM 3572 3584020 - 3584006 - G 70 -7.8 -3.86346 | GTAGGGGCTGATAAA GCTACC ACT GGCAGC AAAGGCCACGGTCAT Ssed_2960 3587266 - 3585845 - | Sulfate adenylyltransferase TERM 3573 3586055 - 3586024 - G 71 -8.8 -3.7282 | gap 1, opp_overlap 3586033 3586036, overlap 3586032 TGAGCCTATCAATAA CGATG-AAAGCGCCC GTA GAGCGGTTTACATCG TAAGCATCGAACTGC TERM 3574 3586511 - 3586497 - G 71 -2.8 -4.84761 | overlap 3586498 ACATTGCCACAAAAA CCTCGA AAA TCAAGA TTTGGACGATTAACG Ssed_2961 3588391 - 3587486 - | sulfate adenylyltransferase subunit 2 Ssed_2962 3588993 - 3590573 + | beta-lactamase domain-containing protein TERM 3575 3590584 - 3590605 + F 73 -10.1 -2.77233 | opp_overlap 3590578 3590586, overlap 3590583 3590586 ACTAGAAAAGGTAGA CACGCCCCT CTGT AGGAGCGTG ATTTAGCCGTTGTAG Ssed_2963 3591027 - 3592226 + | hypothetical protein TERM 3576 3592279 - 3592234 - T 72 -8.4 -3.45571 | TGCTTTAAACATCAA GCTGTATGGCAGGAGAAATA TTGACT CATTAGTCTTGCCATACAGC CACGTATCAAATACT Ssed_2964 3593267 - 3592353 - | hypothetical protein Ssed_2965 3593987 - 3593301 - | WecB/TagA/CpsF family glycosyl transferase Ssed_2966 3595223 - 3594084 - | UDP-N-acetylglucosamine 2-epimerase TERM 3577 3595570 - 3595588 + r 71 -7.4 -3.93769 | opp_overlap 3595570, overlap 3595566 GAGTAAAAAGAGAAA GCCAAGTC ATA GACTTGAC TTAATTTTTTACCAT TERM 3578 3595588 - 3595570 - R 91 -9.6 -4.58297 | opp_overlap 3595570 3595566 GAGTAAAAAGAGAAA GCCAAGTC ATA GACTTGAC TTAATTTTTTACCAT Ssed_2967 3596749 - 3595649 - | UDP-N-acetylglucosamine 2-epimerase TERM 3579 3596621 - 3596660 + g 73 -4.6 -4.82756 | opp_overlap 3596632, overlap 3596621 CATGTCATAGTGCTG CCC-GGTATGAACAATAA TCTCAT TTATTGTTC-TATCAGGG TTTTCTTCATTGTGT Ssed_2968 3597374 - 3596838 - | acetyltransferase Ssed_2969 3598720 - 3597371 - | O-antigen and teichoic acid-like export protein Ssed_2970 3599820 - 3598720 - | DegT/DnrJ/EryC1/StrS family protein Ssed_2971 3600404 - 3599826 - | putative acetyltransferase TERM 3580 3600449 - 3600419 - R 83 -12.7 -2.5602 | overlap 3600415 TAATGACTCAACTCA TCTGCAAGCCATT ACAGA AATGGCTTGCAGT GCAATATAGATAGAA Ssed_2972 3601419 - 3600475 - | MviM protein Ssed_2973 3602693 - 3601422 - | UDP-glucose/GDP-mannose dehydrogenase TERM 3581 3601463 - 3601482 + g 83 -6.4 -4.86731 | opp_overlap 3601466, overlap 3601466 TTTCGAAAACATACT TAACGTCG TAAA CGACGTGA TTTTCTTTACCAAGC TERM 3582 3602198 - 3602211 + g 73 -4.5 -4.77173 | opp_overlap 3602198 3602199, overlap 3602199 AAGTTATCTTCATAA TCGTC GTCA GACGG TTTATTTTGTCACCC Ssed_2974 3604059 - 3602758 - | hypothetical protein Ssed_2975 3605031 - 3604078 - | chain length determinant family protein TERM 3583 3604322 - 3604308 - G 80 -4.2 -5.26316 | TGAGCTGATAAAAAA CAGATC TAA GTTCTG AAAGTTGAGCATTCT Ssed_2976 3605530 - 3605078 - | hypothetical protein Ssed_2977 3606009 - 3605527 - | hypothetical protein TERM 3584 3605660 - 3605644 - G 80 -6.5 -4.79955 | AGAGGCAGAATAAAA TCGAGAC CAG GACTCGA TATAGACAACTTGTT Ssed_2978 3607231 - 3606158 - | glycosyltransferase-like protein Ssed_2979 3608747 - 3607221 - | hypothetical protein Ssed_2980 3609760 - 3608807 - | cell wall biosynthesis glycosyltransferase-like protein TERM 3585 3609270 - 3609286 + g 100 -9.5 -5.24129 | opp_overlap 3609270 AGATTGATTATCATA GCATTAG CAT CTAATGC TTTTTTATGGGAGCC Ssed_2981 3610916 - 3609753 - | hypothetical protein TERM 3586 3610013 - 3609987 - G 74 -10.8 -2.87132 | overlap 3609992 GCTGGTGCCGATACA GGGAACGCCCTG ACT CAAGGCGCTCAC ACAACCATGAAAACG TERM 3587 3610008 - 3609992 - G 73 -10.1 -3.15999 | overlap 3609987 TGCCGATACAGGGAA CGCCCTG ACT CAAGGCG CTCACACAACCATGA Ssed_2982 3612011 - 3610920 - | nitroreductase-like protein Ssed_2983 3613489 - 3612206 - | polysaccharide biosynthesis protein Ssed_2984 3614833 - 3613868 - | acetyltransferase TERM 3588 3614627 - 3614639 + g 71 -2.7 -4.87665 | GTTCAGAGCCTTCAA TAAAC CAG GTTTG TTTTTCTCCATAGAG Ssed_2985 3615755 - 3615084 - | adenylyl-sulfate kinase Ssed_2986 3617552 - 3615825 - | TrkA domain-containing protein Ssed_2987 3619058 - 3617649 - | Sulfate adenylyltransferase TERM 3589 3619242 - 3619255 + r 71 -9.5 -2.90065 | CTTGTATCACTGTTC CCGGC TAAA GCCGG TCCTATTTCTAAAAT Ssed_2988 3620188 - 3619283 - | sulfate adenylyltransferase subunit 2 TERM 3590 3620406 - 3620387 - R 72 -3.6 -5.03715 | ATTATGTGGAAAAAA GTAAATAG AGTG CTATTTCC AGGATAGTTAACACT Ssed_2989 3621258 - 3621109 - | hypothetical protein Ssed_2990 3622663 - 3621605 - | dTDP-glucose 4,6-dehydratase TERM 3591 3621862 - 3621895 + g 74 -3.9 -4.93365 | gap 1, opp_overlap 3621862 CCAACTCCTCTAAAA GTGAACATAG-CGTCG TCA CAACTTCTATGTTCGC TTTTTCGTTATGACC Ssed_2991 3623749 - 3622847 - | glycosyl transferase family protein Ssed_2992 3624737 - 3623739 - | glycosyltransferase-like protein TERM 3592 3624787 - 3624765 - R 85 -9.2 -4.30014 | opp_overlap 3624765 TGGATTAATCTAAAA GGCACTAC AATACAA GTAGTGCC TTTTTATATAACTAA TERM 3593 3624765 - 3624787 + r 90 -9.2 -4.99035 | opp_overlap 3624765 TGGATTAATCTAAAA GGCACTAC AATACAA GTAGTGCC TTTTTATATAACTAA TERM 3594 3624824 - 3624810 - R 93 -7.2 -5.39681 | ATAACTAAATAAAAA CTTACA TTT TGTAAG CAAACAGTCTTCTTG Ssed_2993 3625306 - 3625133 - | putative transposase TERM 3595 3626142 - 3626132 - R 72 -3.2 -5.055 | overlap 3626122 TGAATCGTTAAAAAA CGCT CGC AACG TCACCCTACTTTTTC Ssed_2997 3626886 - 3626188 - | hypothetical protein TERM 3596 3626367 - 3626355 - G 73 -5.5 -4.59773 | GGTCAGGGTCAAAAA GATGG CGT CCACC TGAGGCATTTGAATA Ssed_2998 3628079 - 3626895 - | hypothetical protein Ssed_2999 3628921 - 3628079 - | hypothetical protein TERM 3597 3628971 - 3628954 - R 77 -7.7 -4.19735 | opp_overlap 3628954 GGTTGTAAAATTAAA GGTGGAT ATTT ACCCACC TTAGTATATAAACTA Ssed_3000 3629995 - 3629003 - | NDP-sugar dehydratase or epimerase Ssed_3001 3631671 - 3630106 - | hypothetical protein TERM 3598 3631476 - 3631498 + g 80 -5 -5.02476 | opp_overlap 3631477, overlap 3631477 GCATATTCTCATCAT ATTTTTCAAT AGG ATTGAAAAAC TTTTTTGCCCCATAT Ssed_3002 3632813 - 3631668 - | hypothetical protein TERM 3599 3631852 - 3631874 + g 70 -2 -4.85599 | AACAAATGATGTTCA TGAAGGTTAA CTT TTAACATGCA TTTTTGTAGAATACG Ssed_3003 3633984 - 3632848 - | pyridoxal phosphate-dependent enzyme Ssed_3004 3636518 - 3635322 - | hypothetical protein TERM 3600 3635948 - 3635926 - G 78 -10.8 -3.39772 | overlap 3635924 TCAAAGTCGCAAACA TTATCGATAT TAA ATATCGATAA AAAATCTGCATAAAG Ssed_3005 3637755 - 3636931 - | hypothetical protein TERM 3601 3637736 - 3637754 + g 73 -2.4 -5.08878 | TTATGGTAGCCCACA TGAAGGTA GAT TTCTTTCA TTTTATTTATCTATT Ssed_3006 3638818 - 3637823 - | hypothetical protein Ssed_3007 3640188 - 3638917 - | hypothetical protein TERM 3602 3640139 - 3640127 - G 73 -4.9 -4.82154 | overlap 3640114 AATTTATAGGAAAAA CTATA AAA TATAG GCCCTAATACATGAT Ssed_3008 3640970 - 3640188 - | HAD superfamily hydrolase-like protein Ssed_3009 3641877 - 3640987 - | glycosyl transferase family protein Ssed_3010 3642604 - 3642191 - | rfbqrso22-4-like protein TERM 3603 3642640 - 3642652 + r 70 -2.7 -5.07053 | AACTTAGTGGCAGTT GTAAT CTC ATTGC TTTTTTAAAATACTT Ssed_3011 3643701 - 3642790 - | dTDP-4-dehydrorhamnose reductase Ssed_3012 3644292 - 3643747 - | dTDP-4-dehydrorhamnose 3,5-epimerase Ssed_3013 3645212 - 3644322 - | glucose-1-phosphate thymidylyltransferase Ssed_3014 3645925 - 3645209 - | ABC transporter related TERM 3604 3645393 - 3645403 + g 71 -4.6 -4.54727 | opp_overlap 3645393, overlap 3645387 ATTTTTTCTTTTAAA GCGG TTT CTGC TTTTAATTTAAAAGC Ssed_3015 3646695 - 3645922 - | ABC-type polysaccharide/polyol phosphate export systems permease component-like protein Ssed_3016 3647073 - 3646705 - | hypothetical protein Ssed_3017 3647787 - 3647080 - | glycosyl transferase family protein TERM 3605 3647953 - 3647918 - R 85 -7 -5.08824 | overlap 3647919 3647920 GGTCTAGTCAAAAAA TCGATTCAGATATAGC TATA GATATATCTGAATCAC ACGCAGCTGTTCCCG TERM 3606 3647952 - 3647919 - R 80 -10.5 -3.64812 | overlap 3647918 3647920 GTCTAGTCAAAAAAT CGATTCAGATATAGC TATA GATATATCTGAATCA CACGCAGCTGTTCCC TERM 3607 3647951 - 3647920 - R 81 -11.8 -2.78405 | overlap 3647919 3647918 TCTAGTCAAAAAATC GATTCAGATATAGC TATA GATATATCTGAATC ACACGCAGCTGTTCC Ssed_3018 3649664 - 3648042 - | hypothetical protein TERM 3608 3649767 - 3649751 - R 100 -13.7 -5.4505 | opp_overlap 3649751 TTTTCCAATAAAAAA GGCGAGC TAA GCTCGCC TTTTTTCAAAAATAA TERM 3609 3649751 - 3649767 + r 100 -13.7 -5.02074 | opp_overlap 3649751 TTTTCCAATAAAAAA GGCGAGC TAA GCTCGCC TTTTTTCAAAAATAA Ssed_3019 3651136 - 3649793 - | hypothetical protein TERM 3610 3651121 - 3651135 + g 81 -5.8 -4.98522 | CTAGTAGAGTGCTCT TGAAAA TCG TTTTCA TTTTTGTCTCCAATT TERM 3611 3651285 - 3651271 - R 75 -2.8 -5.18726 | opp_overlap 3651282, overlap 3651272 CCCTGACAAGAAAAA CCAAGA AAT CCTTGA ATCTTCAATTATCAA TERM 3612 3651929 - 3651907 - R 79 -7 -4.62872 | ACCAAGGCTCAAAAA GGAGAAGCAC ATC ACACTTCTCC CTTACAAAAATTAAA Ssed_3020 3654039 - 3651949 - | Type II secretory pathway component PulD-like protein TERM 3613 3652902 - 3652925 + g 72 -11 -2.62263 | opp_overlap 3652900 TATTCCCCGAATAGC TCTCCCCGCT AATA AGCGGAGAGA TACTGTCACCCAGAT Ssed_3021 3654661 - 3654140 - | hypothetical protein Ssed_3022 3655199 - 3654648 - | hypothetical protein TERM 3614 3654708 - 3654687 - G 73 -5.2 -4.65895 | opp_overlap 3654689 CGCGGGATTGAAAAA TATGACCA TATTTC CGGTCATA TATCCAAGCGATGCC Ssed_3023 3656169 - 3655192 - | hypothetical protein TERM 3615 3655821 - 3655847 + g 100 -6.5 -5.5943 | overlap 3655822 AGAAGATGGCCAGTG ACTGCTGCTCG CTTGC CGAGGAGCAGA TTTTTTTGGTCGTTT TERM 3616 3655822 - 3655846 + g 79 -10 -3.93218 | overlap 3655821 GAAGATGGCCAGTGA CTGCTGCTCG CTTGC CGAGGAGCAG ATTTTTTTGGTCGTT Ssed_3024 3657232 - 3656339 - | Type II secretory pathway component PulK-like protein Ssed_3025 3657906 - 3657232 - | hypothetical protein Ssed_3026 3658340 - 3657903 - | hypothetical protein Ssed_3027 3658770 - 3658315 - | hypothetical protein Ssed_3028 3659953 - 3658742 - | type II secretion system protein Ssed_3029 3661605 - 3659953 - | general secretion pathway protein E TERM 3617 3660578 - 3660598 + g 72 -10.5 -3.03441 | ACCTGGTTAACCCCT TCCAGTTGA TAC TCGACTGGA TCTTCGAGGGTAATA Ssed_3030 3662024 - 3661605 - | general secretion pathway protein G Ssed_3031 3663123 - 3662071 - | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase TERM 3618 3662318 - 3662328 + g 71 -6.8 -4.29829 | opp_overlap 3662318 CGATCGGGTTTGAAA GGTG ATT CACC TTTATTGATCCTTCT TERM 3619 3663214 - 3663168 - R 82 -11.9 -3.08867 | gap 1, overlap 3663176 CTAACGTTGAACAGA GCACAAAACAAGCACTACTCGA ACTT TCAAGCAGTACCTGTTTT-TGC ACTACATGTTTGTAA TERM 3620 3663207 - 3663176 - R 87 -8.8 -4.5477 | overlap 3663168 GAACAGAGCACAAAA CAAGCACTACTCGA ACTT TCAAGCAGTACCTG TTTTTGCACTACATG Ssed_3032 3666056 - 3663288 - | polysaccharide export protein TERM 3621 3664492 - 3664505 + g 90 -8.1 -5.1417 | ACGCCACCAAGTTGG CTGCG GTTG CGCAG TTTTTGATTTTCTAA Ssed_3033 3666910 - 3666371 - | NusG antitermination factor TERM 3622 3668122 - 3668110 - g 73 -3.4 -4.83715 | AATGTAAAAAAAGAA CCTT TGACC AAGG TTGAGCGTGATCGCA Ssed_3034 3667387 - 3668862 + | alkaline phosphatase TERM 3623 3668915 - 3668936 + T 100 -14.5 -5.4251 | opp_overlap 3668915 GCTCAAACGAATAAA CGCCGCATA TGTA TATGCGGCG TTTTTTATATCTAAA TERM 3624 3668936 - 3668915 - T 100 -14.5 -4.39696 | opp_overlap 3668915 GCTCAAACGAATAAA CGCCGCATA TGTA TATGCGGCG TTTTTTATATCTAAA Ssed_3035 3669417 - 3669088 - | S23 ribosomal Ssed_3036 3670942 - 3669839 - | response regulator receiver protein TERM 3625 3670472 - 3670484 + g 73 -4.7 -4.77165 | overlap 3670473 CTGCTGAACACTCTT AGCCG CTT CGGCA TTTTGTTCTAACAGC Ssed_3037 3672249 - 3671284 - | surface lipoprotein-like protein TERM 3626 3671892 - 3671873 - G 80 -6.5 -4.83169 | opp_overlap 3671875 ACTGGTCGATAAAAA TACCTGT CCAGGT ACAGGTA GTTAAAGTCCCACAT TERM 3627 3672092 - 3672125 + g 91 -13.4 -3.57792 | gap 1 TAAGCCTGGACTGAG TTAGC-CTGGTCAGA GTTAG TCTGACCAGAGCTAA TTTGGGAATCGGTAG TERM 3628 3674137 - 3674122 - g 77 -10.4 -3.53343 | AAGGCGTTCGGGAAA GCGGGA GGCC TCCCGC AAATGACAGAGAAAG Ssed_3038 3672604 - 3674946 + | hypothetical protein TERM 3629 3675129 - 3675116 - f 72 -9.5 -3.08679 | opp_overlap 3675099 GGCTTTGATGTAAGA CCGGC TTTA GCCGG GAATGGCTTCGACAT TERM 3630 3675271 - 3675258 - f 72 -9.5 -3.08679 | opp_overlap 3675241, overlap 3675241 GGCTTTGATGTAAGA CCGGC TTTA GCCGG GAATGGTCCAGCAAA Ssed_3039 3675306 - 3675641 + | FlhB domain-containing protein TERM 3631 3675651 - 3675665 + T 72 -10 -2.71144 | opp_overlap 3675644 GTTTAAAAGAGCGAC GCACAC CTT GTGTGC TGATTGGCGGCGATG TERM 3632 3675774 - 3675760 - T 72 -10 -2.53119 | overlap 3675759 AAGGGCTGAGAAGAT GCACAC CTT GTGTGC TAAGCGACGGCTTAG Ssed_3040 3676931 - 3676527 - | hypothetical protein TERM 3633 3677291 - 3677257 - R 80 -10 -3.74975 | overlap 3677259 TTATAGAAGATACAA GATTTCAGGCTCCGGC AAA ACCGGAACCTGAAAAT AGACCAGCAAATTCC TERM 3634 3677289 - 3677259 - R 100 -17 -3.44751 | overlap 3677257 ATAGAAGATACAAGA TTTCAGGCTCCGGC AAA ACCGGAACCTGAAA ATAGACCAGCAAATT Ssed_3041 3677875 - 3677384 - | CheW protein Ssed_3042 3679016 - 3677883 - | CheW protein Ssed_3043 3679791 - 3679000 - | cobyrinic acid a,c-diamide synthase TERM 3635 3679275 - 3679289 + g 71 -2.8 -4.98857 | TTTTCTTAGACCGCC CCATTA AGA TCATGG TTTTTATCATTCGGT Ssed_3044 3680481 - 3679828 - | hypothetical protein Ssed_3045 3681589 - 3680474 - | chemotaxis-specific methylesterase Ssed_3046 3683816 - 3681615 - | CheA signal transduction histidine kinase Ssed_3047 3684569 - 3683832 - | chemotaxis phosphatase, CheZ TERM 3636 3684128 - 3684106 - G 71 -9.2 -3.5393 | opp_overlap 3684110 AGTAGCTCTCTTAAA CGAATCGAAT CTA ATTCGCTTCG ATCGACAAACTGCTG Ssed_3048 3684966 - 3684583 - | response regulator receiver protein Ssed_3049 3685759 - 3685040 - | flagellar biosynthesis sigma factor Ssed_3050 3686633 - 3685752 - | cobyrinic acid a,c-diamide synthase TERM 3637 3686133 - 3686087 - G 85 -9.7 -4.4267 | gap 1, opp_overlap 3686126, overlap 3686125 3686126 TTTTAAAACGGAAAA CACC-ATGCTCACGACTCAATA TCTT TATTAAGGCATAAGCATCGGTG ATCGATGTCGGTTCA TERM 3638 3686208 - 3686191 - G 70 -2.1 -4.8543 | gap 1, overlap 3686201 GAAGCCCGAGAAAAA CTCA-ATA CCA TATCTGAG ATACCTGCCGCAGTA Ssed_3051 3688032 - 3686638 - | flagellar biosynthesis regulator FlhF Ssed_3052 3690146 - 3688044 - | flagellar biosynthesis protein FlhA TERM 3639 3688946 - 3688922 - G 72 -10.7 -2.54723 | overlap 3688921 3688919 3688924 3688928 CGCGAATATGAACAG CAGGAACCAGG AAG CCAAGTTCCTG AGACAGTTTCTTTCT TERM 3640 3689402 - 3689378 - G 82 -12.1 -3.25307 | overlap 3689376 CAATAGAGAGCAACA GGCCTGGTATC TGA GCCACCAGGCC ATCACCAATGGTTAG Ssed_3053 3691581 - 3690448 - | flagellar biosynthesis protein FlhB Ssed_3054 3692411 - 3691614 - | flagellar biosynthesis protein FliR Ssed_3055 3692733 - 3692464 - | flagellar biosynthetic protein FliQ Ssed_3056 3693488 - 3692742 - | flagellar biosynthesis protein FliP Ssed_3057 3693862 - 3693485 - | flagellar biosynthesis protein, FliO Ssed_3058 3694254 - 3693871 - | flagellar motor switch protein Ssed_3059 3695385 - 3694360 - | flagellar motor switch protein FliM Ssed_3060 3695948 - 3695427 - | flagellar basal body-associated protein FliL Ssed_3061 3697897 - 3696068 - | flagellar hook-length control protein Ssed_3062 3698502 - 3698056 - | flagellar export protein FliJ TERM 3641 3698557 - 3698525 - R 83 -9.9 -3.83318 | opp_overlap 3698530 3698532, overlap 3698534 CCTGGAATAAGAGAA GGTTATAGACTCTAG GTC CTAGAGCCTAGGACC TAGAAACTCATTCAT TERM 3642 3698530 - 3698567 + r 70 -9.3 -3.22091 | gap 1, opp_overlap 3698525 3698534, overlap 3698532 AATAAGAGAAGGTTA T-AGACTCTAGGTCCTAG AGC CTAGGACCTAGAAACTCA TTCATACCTTACACT TERM 3643 3698532 - 3698564 + r 91 -13.5 -2.8007 | opp_overlap 3698525 3698534, overlap 3698530 TAAGAGAAGGTTATA GACTCTAGGTCCTAG AGC CTAGGACCTAGAAAC TCATTCATACCTTAC TERM 3644 3698562 - 3698534 - R 100 -16.9 -2.92921 | opp_overlap 3698532 3698530, overlap 3698525 AGAGAAGGTTATAGA CTCTAGGTCCTAG AGC CTAGGACCTAGAA ACTCATTCATACCTT Ssed_3063 3699909 - 3698569 - | flagellum-specific ATP synthase Ssed_3064 3701034 - 3700030 - | flagellar assembly protein FliH Ssed_3065 3702083 - 3701034 - | flagellar motor switch protein G TERM 3645 3701104 - 3701114 + g 73 -5.4 -4.58283 | AGACGTCGTGCGATA GAGA GGA TCTC TTTTTGAGCCACTTC TERM 3646 3701988 - 3702004 + g 82 -5.1 -5.08824 | GGCTTCGCTTAAGCT CAGCAAT AAG ATGGCTG TTTTTTCGGTACCAG Ssed_3066 3703782 - 3702073 - | flagellar MS-ring protein TERM 3647 3702608 - 3702620 + g 71 -10.5 -2.75844 | overlap 3702607 ACTTGACCATCTTCG CCGGC ACT GCCGG ATTTAAAATCGACGG Ssed_3067 3704191 - 3703859 - | flagellar hook-basal body complex subunit FliE Ssed_3068 3705874 - 3704516 - | two component, sigma54 specific, Fis family transcriptional regulator Ssed_3069 3706982 - 3705867 - | PAS/PAC sensor signal transduction histidine kinase TERM 3648 3707196 - 3707226 + r 73 -6.8 -4.15998 | opp_overlap 3707197, overlap 3707197 GCTTAGAAAACAAAA ACCAGCTAACCCTC ATA GAGAATTAGCTGGC TTCTTTAATTTAAAT TERM 3649 3707225 - 3707197 - R 100 -14.7 -5.54907 | opp_overlap 3707197 3707196 CTTAGAAAACAAAAA CCAGCTAACCCTC ATA GAGAATTAGCTGG CTTCTTTAATTTAAA TERM 3650 3707197 - 3707225 + r 75 -10.3 -3.08514 | opp_overlap 3707197, overlap 3707196 CTTAGAAAACAAAAA CCAGCTAACCCTC ATA GAGAATTAGCTGG CTTCTTTAATTTAAA Ssed_3070 3708710 - 3707277 - | sigma-54 dependent trancsriptional regulator TERM 3651 3708818 - 3708807 - R 72 -4.4 -4.76213 | ACAAACTGAACAAAA TCAC TACC GTGA GGAATAGTGTATTAT Ssed_3071 3709411 - 3709001 - | flagellar protein FliS Ssed_3072 3709748 - 3709422 - | hypothetical protein TERM 3652 3709668 - 3709678 + g 82 -5.4 -5.03314 | ATCAGCCGTTTCGTT TTCC GCT GGAA TTTTTTCCAACTCAA Ssed_3073 3711149 - 3709776 - | flagellar hook-associated 2 domain-containing protein TERM 3653 3710245 - 3710270 + g 80 -3.9 -5.252 | gap 1, opp_overlap 3710245, overlap 3710255 ATTGAGCGGATCATA GAGTCTCCCTGC AGC GCAGCG-GCCTC TTTTTTATCAGCATC Ssed_3074 3711591 - 3711202 - | flagellar protein FlaG protein TERM 3654 3711435 - 3711449 + g 74 -2.8 -5.10029 | TTTCATCTAACTTGG GTTCTT CAG AAGCAC TTTTTTCCACTTCCT TERM 3655 3711661 - 3711638 - R 86 -11 -3.8901 | opp_overlap 3711638 CCCTAAACCATTAAA GGGAGATCCG TCGC CGAACCTCCC TTTCTACTTATTAAC TERM 3656 3711638 - 3711661 + r 73 -6.6 -4.14257 | opp_overlap 3711638 CCCTAAACCATTAAA GGGAGATCCG TCGC CGAACCTCCC TTTCTACTTATTAAC Ssed_3075 3712517 - 3711699 - | flagellin TERM 3657 3712004 - 3712024 + g 71 -4.7 -4.64676 | overlap 3712001 TGACTACTGCGTTCA CAGATAGTG ATG CTTTATCTG TTTTCTTGACGGTAA Ssed_3076 3713583 - 3712762 - | flagellin TERM 3658 3713070 - 3713090 + g 71 -4.7 -4.64676 | overlap 3713067 TGACGACTGCGTTCA CAGATAGTG ATG CTTTATCTG TTTTCTTGACGGTAA Ssed_3077 3714840 - 3713650 - | flagellar hook-associated protein FlgL Ssed_3078 3716814 - 3714898 - | flagellar hook-associated protein FlgK TERM 3659 3715544 - 3715566 + g 71 -9 -3.57619 | overlap 3715540 ATCACTACACCGATC CCTGCGGCGG CCC CTGCAGCGGG TCTTATTTCAAATTT Ssed_3079 3717904 - 3716891 - | peptidoglycan hydrolase TERM 3660 3718060 - 3718033 - R 80 -10 -3.78022 | opp_overlap 3718033 GGGAGAGGCATCAAA GAGAGTTCAG ACAGAAAA CTGAACTCTC TTATATGAAGGCATT TERM 3661 3718033 - 3718060 + r 79 -10 -3.48772 | opp_overlap 3718033 GGGAGAGGCATCAAA GAGAGTTCAG ACAGAAAA CTGAACTCTC TTATATGAAGGCATT Ssed_3080 3719186 - 3718095 - | flagellar basal body P-ring protein TERM 3662 3718922 - 3718909 - G 73 -5.2 -4.63218 | overlap 3718911 CCCGGCTTAATAAAA GCCG GCATTA CGGC GCTGACCGCCACAAC Ssed_3081 3719888 - 3719199 - | flagellar basal body L-ring protein Ssed_3082 3720687 - 3719899 - | flagellar basal body rod protein FlgG Ssed_3083 3721442 - 3720699 - | flagellar basal body rod protein FlgF TERM 3663 3721607 - 3721627 + r 100 -16.9 -3.96148 | opp_overlap 3721601 3721600 AAGGTAAAGCGGCAA GGCGTTGCC AGC GGCAACGCC TTTATCATAGAGGAG Ssed_3084 3723013 - 3721649 - | flagellar hook protein FlgE TERM 3664 3721929 - 3721905 - G 71 -6.4 -4.30576 | gap 1 TGCTCATTAGCAAAA CGC-GCCAAGG CCAC CCTTGCCAGCG CTACCGTCGCACCAT TERM 3665 3723132 - 3723159 + r 90 -13 -2.73681 | opp_overlap 3723128 3723126 3723155 3723158 GGTATAAAATCTTTA CCTAGTTTAAAT AGAA ATTTAAACTAGG TACTTAAACTAAGTA TERM 3666 3723192 - 3723168 - R 83 -10.9 -3.67564 | opp_overlap 3723167 3723172, overlap 3723158 3723155 3723181 AACTAGGTACTTAAA CTAAGTACTCA AAC TAAGTACTTAG ATGACTTACGTTTCT Ssed_3085 3724046 - 3723198 - | flagellar basal body rod modification protein Ssed_3086 3724476 - 3724060 - | flagellar basal body rod protein FlgC Ssed_3087 3724877 - 3724479 - | flagellar basal body rod protein FlgB TERM 3667 3725136 - 3725124 - R 72 -9.1 -3.30159 | opp_overlap 3725123 CGAAGCCGTCTATAA GGCAC GCT GTGCC GTCCTTCCGTTAAGT Ssed_3088 3725979 - 3725146 - | protein-glutamate O-methyltransferase TERM 3668 3725567 - 3725583 + g 93 -6.5 -5.49569 | AAAATGGATGCACTA CCTGGCA GGG TTCCAGG TTTTTTCTGTTGATA Ssed_3089 3727030 - 3726110 - | response regulator receiver modulated CheW protein TERM 3669 3727844 - 3727828 - g 79 -3.7 -5.27938 | ATTTCGAAATAAAAA CAGTG GGAGAAG CACTG CGTGATGGCAATTTA Ssed_3090 3727170 - 3727949 + | flagellar basal body P-ring biosynthesis protein FlgA Ssed_3091 3728055 - 3728390 + | anti-sigma-28 factor, FlgM Ssed_3092 3728398 - 3728823 + | FlgN family protein TERM 3670 3728967 - 3728988 + T 74 -4.3 -4.9445 | overlap 3728970 CCTGAGCAGGCAGGA GCCCGAAGC TTTA GCTTCGTTC TTTTTGCTTAGTTCT TERM 3671 3728970 - 3728985 + T 88 -9 -4.54681 | overlap 3728967 GAGCAGGCAGGAGCC CGAAGC TTTA GCTTCG TTCTTTTTGCTTAGT Ssed_3093 3729539 - 3729093 - | hypothetical protein Ssed_3094 3730162 - 3729536 - | hypothetical protein TERM 3672 3730206 - 3730192 - H 75 -2.8 -5.1963 | CTTAACCAATAAAAA TGCTAT GAG ATCGCA AAGAGTAAAACTAGC Ssed_3095 3730519 - 3732303 + | hypothetical protein TERM 3673 3732376 - 3732335 - f 73 -10.3 -2.88776 | opp_overlap 3732342 3732347, overlap 3732334 CCAAAGTCATCAAAG CGTTTTTCCTAAGTTCAAT CAAT ATTGAACTTAGGTTAATCG AAATAATTCAGAAAC TERM 3674 3732342 - 3732369 + F 95 -14.4 -3.16039 | opp_overlap 3732335 3732334, overlap 3732347 CATCAAAGCGTTTTT CCTAAGTTCAAT CAAT ATTGAACTTAGG TTAATCGAAATAATT Ssed_3096 3732633 - 3733799 + | hypothetical protein TERM 3675 3734441 - 3734425 - f 81 -6.7 -4.82667 | opp_overlap 3734416 3734427 TCAGCATATTAAAAA TATTTTC AGT GAAAATA ATATAGACTTTAGAT TERM 3676 3735605 - 3735595 - g 82 -5.4 -5.01732 | overlap 3735598 AACTGTTTGAAAAAA CGAT TCA ATCG ATGAAGTCCTACAAA Ssed_3097 3734505 - 3735716 + | nucleoside-diphosphate sugar epimerase Ssed_3098 3735747 - 3736904 + | UDP-bacillosamine synthetase TERM 3677 3738009 - 3737999 - g 74 -4 -4.92783 | overlap 3738001 AAGCCATTATAAAAA TTCT CAC AGAA ATGAGCCGTAAGCCG Ssed_3099 3736897 - 3738060 + | putative NeuC TERM 3678 3738215 - 3738190 - g 79 -2.5 -5.37593 | TTTTAAAGCAAAAAA CTTAGTCACCG CAAC CGCTGAGCAAG CCGATTATCAGGTTA TERM 3679 3738327 - 3738337 + G 73 -3.2 -4.96848 | ATCACTGTCAAAAAC TTGG AAT CCAG TTTTTATCTACGGCA TERM 3680 3739020 - 3739004 - g 80 -6.5 -4.67353 | overlap 3739006 CGAGCCATTCAAAAA GGCGAGA ATT TCTCGAC CAATAATCTCGCGGT TERM 3681 3739055 - 3739041 - g 73 -5.6 -4.56775 | opp_overlap 3739041, overlap 3739042 ATCTCGCGGTAAAAA GGCCTG GCA CAGGCA CCAGTCCTTATCAAT Ssed_3100 3738062 - 3739135 + | N-acylneuraminate-9-phosphate synthase TERM 3682 3739597 - 3739568 - g 71 -9.3 -3.59202 | TATCGGCATACATAA CCACATAGCGCCA GGTG CGACGATATGTGG CGGGGTTCACACGGG Ssed_3101 3739146 - 3739766 + | sialic acid biosynthesis protein NeuD TERM 3683 3740672 - 3740657 - g 73 -3.3 -4.97666 | AAGATATTATAAAAA GTGTT TCCGCT AACAC CTATATTGATATGCC Ssed_3102 3739768 - 3740826 + | mannose-1-phosphate guanyltransferase Ssed_3103 3740823 - 3741803 + | dehydrogenase Ssed_3104 3741800 - 3742501 + | N-acylneuraminate cytidylyltransferase Ssed_3105 3742495 - 3743253 + | flagellin modification protein A Ssed_3106 3743257 - 3743808 + | acetyltransferase TERM 3684 3744479 - 3744467 - g 71 -4.9 -4.63184 | AACTCATCTCAAAAA GTTTA TTA TAAAC AACAATTTAAGAACA TERM 3685 3745804 - 3745793 - g 72 -5.8 -4.45077 | GAAAAATTATCAAAA CAGC CTGA GCTG CTAAAAGAATATAAA TERM 3686 3746086 - 3746072 - g 80 -4.2 -5.31456 | overlap 3746074 TTAATTGAGAAAAAA GAGAGC CAA GCTCTA GAAGTGTTATTAGCA TERM 3687 3746084 - 3746074 - g 71 -6.8 -4.28383 | overlap 3746072 AATTGAGAAAAAAGA GAGC CAA GCTC TAGAAGTGTTATTAG Ssed_3107 3743957 - 3746482 + | hypothetical protein TERM 3688 3746549 - 3746523 - f 82 -11 -3.56837 | opp_overlap 3746523, overlap 3746515 CGCTAAACAGTATAA TGCCGATTCATT AAT AATTAATCGGCA TTTTCAACCGCTGCT TERM 3689 3746523 - 3746549 + F 88 -11 -4.08945 | opp_overlap 3746515 3746523 CGCTAAACAGTATAA TGCCGATTCATT AAT AATTAATCGGCA TTTTCAACCGCTGCT Ssed_3108 3746590 - 3747069 + | hypothetical protein Ssed_3109 3747287 - 3747862 + | hypothetical protein TERM 3690 3747949 - 3747968 + T 100 -12.2 -5.68438 | opp_overlap 3747949 AGGCTGAAGTATAAA GGTGTTGG TTTA CCAACACC TTTTTTGTTTCATCG TERM 3691 3747968 - 3747949 - T 91 -12.2 -4.05714 | opp_overlap 3747949 AGGCTGAAGTATAAA GGTGTTGG TTTA CCAACACC TTTTTTGTTTCATCG Ssed_3110 3748922 - 3747999 - | hypothetical protein TERM 3692 3748923 - 3748937 + r 72 -4.3 -4.69324 | AAACCTGTTTCCCAT GCTTA CTCCT TAAGC TTTATTGTTTATTGT Ssed_3111 3749710 - 3749078 - | TetR family transcriptional regulator TERM 3693 3749764 - 3749781 + H 70 -8.5 -3.36878 | opp_overlap 3749764, overlap 3749764 ACATTTAAACACAAA CTAGACT GGAC AGTCTAG TTCTCCCTAAATAGA TERM 3694 3749781 - 3749764 - H 85 -8.5 -4.35646 | opp_overlap 3749764 3749764 ACATTTAAACACAAA CTAGACT GGAC AGTCTAG TTCTCCCTAAATAGA TERM 3695 3750905 - 3750930 + G 71 -8.5 -3.78934 | gap 1, opp_overlap 3750903 3750905 GAAAAGTGGAGAAGA GTTTAT-CAGTC AGG GACTGCATAAAC TTGTTGTGGGACAAA Ssed_3112 3749856 - 3750980 + | RND family efflux transporter MFP subunit TERM 3696 3752770 - 3752788 + G 74 -3 -5.06816 | overlap 3752772 GTATCGATTGGGTCG TAGGTGGT AAC ACCCCCTC TTTTTATTACAACCT Ssed_3113 3750984 - 3754076 + | acriflavin resistance protein Ssed_3114 3754341 - 3756344 + | methyl-accepting chemotaxis sensory transducer Ssed_3115 3756811 - 3756960 + | TfoX family regulatory protein TERM 3697 3757090 - 3757062 - T 100 -15.4 -5.77988 | gap 1, opp_overlap 3757062 AGAGACACAAAAAAA GCCCCGCAA-GGT TAAT ACCATTGCGGGGC TATTCAGCTAAAACT TERM 3698 3757062 - 3757090 + T 100 -15.4 -3.05963 | gap 1, opp_overlap 3757062 AGAGACACAAAAAAA GCCCCGCAA-GGT TAAT ACCATTGCGGGGC TATTCAGCTAAAACT Ssed_3116 3757236 - 3757120 - | cyd operon protein YbgT Ssed_3117 3758391 - 3757252 - | alkaline phosphatase Ssed_3118 3759963 - 3758407 - | cytochrome bd ubiquinol oxidase, subunit I TERM 3699 3760919 - 3760889 - R 75 -8.2 -4.13767 | opp_overlap 3760891, overlap 3760890 TTTGTTAGCGCAAAA CGGCCACCTAGCTC TAA AAGCCAGGTGGCTT TTTCATTTCAAGGTC TERM 3700 3760918 - 3760890 - R 82 -11.7 -3.08046 | opp_overlap 3760891, overlap 3760889 TTGTTAGCGCAAAAC GGCCACCTAGCTC TAA AAGCCAGGTGGCT TTTTCATTTCAAGGT TERM 3701 3760891 - 3760917 + r 100 -12.3 -4.98531 | opp_overlap 3760890 3760889 TGTTAGCGCAAAACG GCCACCTAGCT CTAAA AGCCAGGTGGC TTTTTCATTTCAAGG TERM 3702 3761176 - 3761154 - R 100 -15 -6.10489 | opp_overlap 3761154 AATTCCAAAAAAAAA GAGCTTCGAA ATT TTCGAAGCTC TTTTTAATGATTTTG TERM 3703 3761154 - 3761176 + r 100 -15 -4.86773 | opp_overlap 3761154 AATTCCAAAAAAAAA GAGCTTCGAA ATT TTCGAAGCTC TTTTTAATGATTTTG Ssed_3119 3765091 - 3761210 - | phosphoribosylformylglycinamidine synthase Ssed_3120 3765424 - 3766866 + | lytic transglycosylase, catalytic Ssed_3121 3767816 - 3767283 - | cytidine/deoxycytidylate deaminase family protein Ssed_3122 3767927 - 3768856 + | GGDEF domain-containing protein TERM 3704 3768858 - 3768887 + T 78 -10.7 -2.98015 | opp_overlap 3768860 AGATGGCTCAATAAA AAGGGCTGACGTA TTGA TACGTCAGCCCAC TATCTACTACTTAAA TERM 3705 3768885 - 3768860 - T 100 -17.7 -5.06816 | opp_overlap 3768858 ATGGCTCAATAAAAA GGGCTGACGTA TTGA TACGTCAGCCC ACTATCTACTACTTA Ssed_3123 3770507 - 3768930 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3706 3770620 - 3770600 - R 100 -15.5 -4.07535 | opp_overlap 3770600 AAGGGGGATAAAGAA TGGGCGACA CAC TGTCGCCCA TTATCACCGGTTTCT TERM 3707 3770600 - 3770620 + r 100 -15.5 -3.32562 | opp_overlap 3770600 AAGGGGGATAAAGAA TGGGCGACA CAC TGTCGCCCA TTATCACCGGTTTCT Ssed_3124 3772106 - 3770634 - | inositol-5-monophosphate dehydrogenase TERM 3708 3773119 - 3773099 - g 80 -8.9 -4.15833 | overlap 3773073 3773100 ATTACCAGTTGAAAA CCGAGCAGC GCA GCCGCTCGC TGGAAAATAGACTCC TERM 3709 3773118 - 3773100 - g 81 -12.4 -3.09018 | overlap 3773073 3773099 TTACCAGTTGAAAAC CGAGCAGC GCA GCCGCTCG CTGGAAAATAGACTC Ssed_3125 3772228 - 3773556 + | exodeoxyribonuclease VII large subunit TERM 3710 3773597 - 3773627 + T 75 -9.8 -3.34344 | opp_overlap 3773599 ATTTAGTTTCGGCAA CACCAGCTCATC AATATGC GATAAGCTGGTG TTGCTTAGAAGCTAA TERM 3711 3773625 - 3773599 - T 72 -9.5 -3.02144 | opp_overlap 3773597 TTAGTTTCGGCAACA CCAGCTCATCA ATATG CGATAAGCTGG TGTTGCTTAGAAGCT Ssed_3126 3773988 - 3773632 - | DsrE family protein Ssed_3127 3774588 - 3774013 - | methyltransferase type 11 TERM 3712 3774555 - 3774541 - G 77 -4.2 -5.0538 | opp_overlap 3774541 3774543, overlap 3774543 GTCCACCTCAAAAAA GCTAGC CCA GCTATC TTCTTCTGGCATTCC TERM 3713 3774594 - 3774621 + H 77 -10.1 -3.4285 | opp_overlap 3774594 GCGCTTTCATAGCAA CCTTATTCAAA TGATCT TTTGAATAAGG TTATCACTTCAATAA TERM 3714 3774621 - 3774594 - H 75 -10.1 -3.25823 | opp_overlap 3774594 GCGCTTTCATAGCAA CCTTATTCAAA TGATCT TTTGAATAAGG TTATCACTTCAATAA Ssed_3128 3774674 - 3775345 + | ArsR family transcriptional regulator TERM 3715 3775579 - 3775608 + T 90 -11.4 -3.95324 | opp_overlap 3775573 TAAAGAGTACACTCG GGATAGGTCGCG GCTGCG CGCGGCCAATCC TTATTGTTAGACATC Ssed_3129 3776236 - 3775631 - | methyltransferase type 11 TERM 3716 3776161 - 3776132 - G 80 -6.5 -4.66609 | opp_overlap 3776141 3776151, overlap 3776133 GATGGGAGGCAAAAA GTCAATGAAGTCT TTGC AGGCTTCATTGAA GCTTAATGACTGGCT TERM 3717 3776160 - 3776133 - G 73 -10 -3.39483 | opp_overlap 3776141 3776151, overlap 3776132 ATGGGAGGCAAAAAG TCAATGAAGTCT TTGC AGGCTTCATTGA AGCTTAATGACTGGC TERM 3718 3777292 - 3777276 - H 83 -9.5 -3.93398 | overlap 3777281 AGCGATAGATAACAA TGAAGGT ACG ACCTTCA GCGTACTCCGCAATA TERM 3719 3777494 - 3777468 - g 75 -3.7 -5.0916 | gap 1, overlap 3777470 3777472 CTTTCAACACAAAAA GA-GACCCCTGC AGAT GCAGAGGTGATC AGTCATCAATTAATG TERM 3720 3777491 - 3777470 - g 71 -6.5 -4.17211 | overlap 3777468 3777472 TTCAACACAAAAAGA GACCCCTGC AGAT GCAGAGGTG ATCAGTCATCAATTA TERM 3721 3777489 - 3777472 - g 74 -9.1 -3.66691 | overlap 3777470 3777468 CAACACAAAAAGAGA CCCCTGC AGAT GCAGAGG TGATCAGTCATCAAT Ssed_3130 3777387 - 3779141 + | prolyl-tRNA synthetase TERM 3722 3779184 - 3779205 + T 100 -15.9 -5.64274 | opp_overlap 3779184 CAAGAATTAGTAAAA CGCCCTCAG GTTT CTGAGGGCG TTTTTTTATGACTGG TERM 3723 3779205 - 3779184 - T 100 -15.9 -4.39133 | opp_overlap 3779184 CAAGAATTAGTAAAA CGCCCTCAG GTTT CTGAGGGCG TTTTTTTATGACTGG Ssed_3131 3780482 - 3779253 - | putative phenylacetate-coenzyme A ligase Ssed_3132 3781351 - 3780533 - | ABC transporter-related protein TERM 3724 3781396 - 3781370 - R 87 -5 -5.41143 | overlap 3781357 3781372 3781373 TACCCCCTAAAAAAA GAGGGGCGTAAC TAA GTTACGCCCAAA AAGATTAATACCCTA TERM 3725 3781394 - 3781372 - R 95 -12 -4.34482 | overlap 3781357 3781370 3781373 CCCCCTAAAAAAAGA GGGGCGTAAC TAA GTTACGCCCA AAAAGATTAATACCC TERM 3726 3781393 - 3781373 - R 100 -15.5 -3.19966 | overlap 3781357 3781372 3781370 CCCCTAAAAAAAGAG GGGCGTAAC TAA GTTACGCCC AAAAAGATTAATACC Ssed_3133 3782648 - 3781401 - | putative branched-chain amino acid ABC transporter TERM 3727 3781584 - 3781595 + g 85 -5.8 -5.11033 | TACCCAGTTTTTCTG GGCA TACA TGCC TTTTTTAACATTCTC Ssed_3134 3783952 - 3782879 - | inner-membrane translocator Ssed_3135 3784933 - 3784040 - | inner-membrane translocator Ssed_3136 3786894 - 3784930 - | AMP-dependent synthetase and ligase Ssed_3137 3787691 - 3786894 - | ABC transporter-related protein TERM 3728 3787877 - 3787854 - R 100 -8.8 -5.81412 | overlap 3787856 TGTATCTAAAAAAAA GAGAGGTGGG TTGC CCCACCCCTA AATGGAGCGTTTAGA TERM 3729 3787875 - 3787856 - R 93 -11.4 -4.5536 | overlap 3787854 TATCTAAAAAAAAGA GAGGTGGG TTGC CCCACCCC TAAATGGAGCGTTTA Ssed_3138 3788928 - 3787888 - | hypothetical protein TERM 3730 3789317 - 3789327 + G 71 -4.6 -4.56597 | TGGGAGTCTATTGCA CCTC GTG GGGG TTTTTAGGGACCGCC TERM 3731 3790854 - 3790864 + G 85 -5.4 -5.24129 | opp_overlap 3790854 CAGGAACAGTCATAA TCAG GCA CTGA TTTTTTATACCGAAA Ssed_3139 3789169 - 3792654 + | integral membrane sensor hybrid histidine kinase Ssed_3140 3793277 - 3792615 - | two component LuxR family transcriptional regulator TERM 3732 3794444 - 3794422 - g 71 -9.2 -3.5241 | overlap 3794420 GAGCCCTCATAAACA GATGCCCCAA GAG TTAGAGCATC ACCCCAAGACCGCGA Ssed_3141 3793709 - 3794836 + | patatin Ssed_3142 3795636 - 3794923 - | hypothetical protein Ssed_3143 3797596 - 3795647 - | potassium efflux system protein TERM 3733 3797044 - 3797061 + g 73 -7.7 -4.07568 | CCAGGACACCTTCAA CCATGGC ATAA GCTATGG TTTTCGCCGACAACA Ssed_3144 3797781 - 3798662 + | diguanylate cyclase Ssed_3145 3800127 - 3798643 - | tRNA(Ile)-lysidine synthetase Ssed_3146 3803602 - 3800129 - | DNA polymerase III subunit alpha TERM 3734 3802065 - 3802041 - G 74 -10.8 -3.09518 | gap 1, opp_overlap 3802060, overlap 3802057 GCAAAATCGGTAATA GTGGTG-GGTG AGAT CACCACACCAC CGGCGTGCTTACCCG Ssed_3147 3804377 - 3803736 - | ribonuclease H Ssed_3148 3805553 - 3804411 - | lipid-A-disaccharide synthase TERM 3735 3805114 - 3805098 - G 85 -9.5 -4.37092 | ATGTTTGTCATAAAA TGCCTTT TCA AAAGGCA GCAGTGACAGCACCA TERM 3736 3805620 - 3805600 - R 100 -15.5 -4.70515 | opp_overlap 3805597 GAGATGGAAAATAAA GAGCCCGTT TTT AACGGGCTC CGGTATTCGACTGTT Ssed_3149 3806401 - 3805634 - | UDP-N-acetylglucosamine acyltransferase Ssed_3150 3806859 - 3806398 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Ssed_3151 3807914 - 3806889 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Ssed_3152 3808428 - 3807934 - | outer membrane chaperone Skp (OmpH) Ssed_3153 3810981 - 3808498 - | surface antigen (D15) Ssed_3154 3812396 - 3811011 - | putative membrane-associated zinc metalloprotease TERM 3737 3811898 - 3811880 - G 70 -9.6 -3.23216 | TCTCAGGATCACCAA TATGCCCC ACC AGGGCATA CGTCACCTCTTCCCA TERM 3738 3812161 - 3812182 + g 76 -8.7 -4.13767 | AATTCATCAGGCACT TCCTCGACG CGTT CGTCGAGCA TTTTGACATAACCAC Ssed_3155 3813603 - 3812416 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Ssed_3156 3814464 - 3813607 - | phosphatidate cytidylyltransferase Ssed_3157 3815277 - 3814483 - | di-trans, poly-cis-decaprenylcistransferase TERM 3739 3815334 - 3815300 - R 100 -16.6 -3.41023 | opp_overlap 3815298, overlap 3815304 AACCCTTAAAATAGA CAAACGCCGTGTAG TATACCG CTACACGGCGTCTG AACTCTAGTTTCTTA TERM 3740 3815330 - 3815304 - R 100 -13.8 -4.33956 | opp_overlap 3815298, overlap 3815300 CTTAAAATAGACAAA CGCCGTGTAG TATACCG CTACACGGCG TCTGAACTCTAGTTT Ssed_3158 3815915 - 3815358 - | ribosome recycling factor Ssed_3159 3816727 - 3815990 - | uridylate kinase TERM 3741 3816455 - 3816435 - G 74 -9.7 -3.51924 | CTTGCATTGACATAA GCACGATGC AAA GCATCACGC ATCGCCAGACCATTC TERM 3742 3816797 - 3816770 - R 83 -12.8 -2.78672 | overlap 3816765 3816773 GGGAAATATATACGA TAAGACCGCAGC AAAT GCTACGGCCTTA GGGGTGCTTACAAAG TERM 3743 3816794 - 3816773 - R 79 -10.1 -3.52909 | overlap 3816765 3816770 AAATATATACGATAA GACCGCAGC AAAT GCTACGGCC TTAGGGGTGCTTACA Ssed_3160 3817665 - 3816817 - | elongation factor Ts TERM 3744 3817746 - 3817710 - R 93 -11.5 -4.57474 | opp_overlap 3817710 TCAATTGATATAAAA CAGGGGCTGTTACCACC TAA GGTGAAAAGCGCCCCTG TTTTCCTATCATGTC TERM 3745 3817710 - 3817746 + r 86 -9.3 -4.38171 | opp_overlap 3817710 TCAATTGATATAAAA CAGGGGCTGTTACCACC TAA GGTGAAAAGCGCCCCTG TTTTCCTATCATGTC Ssed_3161 3818528 - 3817800 - | 30S ribosomal protein S2 Ssed_3162 3818881 - 3819678 + | methionine aminopeptidase TERM 3746 3820973 - 3820985 + G 75 -5.5 -4.7219 | GCCTTGTCCTTAATG CACCG ACA TGGTG TTTTATCTTCATATC TERM 3747 3821188 - 3821171 - g 73 -2.5 -5.12617 | opp_overlap 3821180, overlap 3821172 CAATTACCCAAAAAA GGCCTGC TCGT GCTGGCG GCGCTGTTTCACGAC Ssed_3163 3819755 - 3822334 + | PII uridylyl-transferase TERM 3748 3822396 - 3822418 + F 84 -10 -3.96093 | CAGTATTTGAATTCT GAGTGAGTTA TTC TAATTCACTC TTTCATATTCATATC Ssed_3164 3822527 - 3823351 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 3749 3823426 - 3823388 - f 79 -9.7 -3.65827 | opp_overlap 3823399, overlap 3823394 3823399 CAAGGGTTAGCTAAA GACAAATAAAATCCCAC TTCAG GTGGGATTTTTTATGCC CATTCAGGTATTATT TERM 3750 3823420 - 3823394 - f 80 -8.1 -4.35044 | opp_overlap 3823399, overlap 3823388 3823399 TTAGCTAAAGACAAA TAAAATCCCAC TTCAG GTGGGATTTTT TATGCCCATTCAGGT TERM 3751 3823399 - 3823415 + F 93 -8.7 -5.25803 | opp_overlap 3823399 3823394 3823388 TAAAGACAAATAAAA TCCCACT TCA GGTGGGA TTTTTTATGCCCATT TERM 3752 3823415 - 3823399 - f 88 -8 -5.13648 | opp_overlap 3823399, overlap 3823394 3823388 TAAAGACAAATAAAA TCCCAC TTCAG GTGGGA TTTTTTATGCCCATT TERM 3753 3823602 - 3823588 - f 73 -5.6 -4.65078 | overlap 3823590 ACACCCTGAATAAAA GACGCT AGG AGCGAC CATGAAAAAGTTCAT Ssed_3165 3823604 - 3823948 + | hypothetical protein TERM 3754 3824001 - 3823972 - T 86 -7.9 -4.89339 | opp_overlap 3823978, overlap 3823973 3823978 AATTAGTCATAAAAA TGAAAACAGCCTC ATTT GAGGCTGTTTTTT TATTTTAAACGGTCA TERM 3755 3824000 - 3823973 - T 88 -11.4 -3.52519 | opp_overlap 3823978, overlap 3823972 3823978 ATTAGTCATAAAAAT GAAAACAGCCTC ATTT GAGGCTGTTTTT TTATTTTAAACGGTC TERM 3756 3823978 - 3823995 + T 100 -11.3 -6.09196 | opp_overlap 3823973 3823972 3823978 TCATAAAAATGAAAA CAGCCTC ATTT GAGGCTG TTTTTTTATTTTAAA TERM 3757 3823995 - 3823978 - T 95 -11.3 -4.82678 | opp_overlap 3823978, overlap 3823973 3823972 TCATAAAAATGAAAA CAGCCTC ATTT GAGGCTG TTTTTTTATTTTAAA Ssed_3166 3824976 - 3824143 - | formyltetrahydrofolate deformylase Ssed_3167 3826487 - 3825018 - | PTS system, glucose-like IIB subunint Ssed_3168 3826903 - 3826439 - | flavodoxin Ssed_3169 3828178 - 3827342 - | pseudouridylate synthase Ssed_3170 3828500 - 3828180 - | hypothetical protein Ssed_3171 3828741 - 3829754 + | hypothetical protein Ssed_3172 3829751 - 3830140 + | hypothetical protein TERM 3758 3830252 - 3830229 - T 100 -11.6 -5.48514 | opp_overlap 3830228 3830227 ACTAATAAAGAAAAA GCGCGGCCCC ATAT GGAGTCGCGC CCTTTATCTCTTTGC TERM 3759 3831606 - 3831620 + T 74 -6.4 -4.4009 | opp_overlap 3831606 CTGAGCATGCAGAGA TCACCG ATT TGGTGA TTTTGTGAAGTCAAA Ssed_3173 3832310 - 3831663 - | GCN5-related N-acetyltransferase Ssed_3174 3832792 - 3833022 + | hypothetical protein Ssed_3175 3833386 - 3833030 - | hypothetical protein Ssed_3176 3833549 - 3833881 + | hypothetical protein Ssed_3177 3833881 - 3834654 + | hypothetical protein TERM 3760 3834686 - 3834660 - T 77 -8 -4.18506 | opp_overlap 3834657 3834661 3834669, overlap 3834678 TCATCTTTAAAAGAA GGGGCTAGATTC TAG GAATCTAGGTCC TAGAACCTAGAATCT Ssed_3178 3835353 - 3834700 - | SecY interacting protein Syd Ssed_3179 3835399 - 3836271 + | 7-cyano-7-deazaguanine reductase TERM 3761 3836310 - 3836344 + T 95 -13.1 -3.6445 | opp_overlap 3836315, overlap 3836315 GATTAAATACACGAC AAAAAGAGGATAGGT TAATC ACCTATCCTCTTTTA TTTAGAAGTTATTAT TERM 3762 3836339 - 3836315 - T 100 -13 -4.97666 | opp_overlap 3836310 3836315 AATACACGACAAAAA GAGGATAGGT TAATC ACCTATCCTC TTTTATTTAGAAGTT TERM 3763 3836315 - 3836339 + T 100 -13 -4.88405 | opp_overlap 3836315, overlap 3836310 AATACACGACAAAAA GAGGATAGGT TAATC ACCTATCCTC TTTTATTTAGAAGTT TERM 3764 3836402 - 3836376 - T 82 -8.8 -4.17608 | TTCAGGTAAAAAAGA CTCCCACCAACA ATT TGTTAATGAGAG AGAGTGAGAGCGATG Ssed_3180 3837304 - 3836525 - | hypothetical protein TERM 3765 3837347 - 3837337 - R 89 -6.8 -5.2696 | TTAAAATTTAAAAAA CTCG ATT CGAG TGGAGATAGCTAAAG TERM 3766 3837396 - 3837373 - R 77 -8.2 -4.19371 | opp_overlap 3837373, overlap 3837381 TAAAGCCTGAACAAA GGGAGAACTT TTCT AAGTTGTCCC TTTGAAAATGAAATG Ssed_3181 3838099 - 3837413 - | hypothetical protein TERM 3767 3838239 - 3838255 + r 72 -9.5 -2.92858 | opp_overlap 3838239, overlap 3838238 3838233 3838241 CTAACGGGGTTAAAA CATTCAC AGT GTGAATG CTTTAGTCTAATTCA TERM 3768 3838255 - 3838239 - R 86 -9.5 -4.09739 | opp_overlap 3838239 3838238 3838233 3838241 CTAACGGGGTTAAAA CATTCAC AGT GTGAATG CTTTAGTCTAATTCA Ssed_3182 3839199 - 3838297 - | LysR family transcriptional regulator Ssed_3183 3840204 - 3839296 - | LysR family transcriptional regulator TERM 3769 3839598 - 3839617 + g 73 -8 -4.08216 | overlap 3839576 TCAAATTTGAGCGGC GCATATTA TGAA TAATATGC TTTTCAGCGAAATAC TERM 3770 3840550 - 3840527 - g 73 -9.6 -3.29013 | overlap 3840508 ACGCCAACAAGGCAA CGGCGAAG ACGCTGAA CTTCGCCG ACAGGGCAGCATTTG Ssed_3184 3840370 - 3842370 + | metallo-beta-lactamase superfamily protein TERM 3771 3843272 - 3843258 - g 73 -10 -3.28924 | opp_overlap 3843258 3843249, overlap 3843231 TATCCTGCTGGACAA CCAACG TTT CGTTGG TGGTGTAGGCTTCCG Ssed_3185 3842878 - 3844068 + | hypothetical protein TERM 3772 3844089 - 3844073 - T 73 -2.3 -5.2189 | opp_overlap 3844086 3844086, overlap 3844062 3844074 3844086 CTAAGTACTAAAAAA GTACT AAGCAAA AGTAC TAAGTAGTTAGAACT TERM 3773 3844110 - 3844086 - T 78 -7.3 -4.47217 | opp_overlap 3844086 3844086, overlap 3844073 3844074 AAGTACTAAGCAAAA GTACTAAGT AGTTAGA ACTTAGTAC TTAGCTATACCAGGC TERM 3774 3844229 - 3844278 + T 90 -5.2 -5.66229 | TTCTCACTCCCTTTT GAGCAG-GACTGATAGCGATTACC CTTT GGTAATAGCTAA-ACTCCCTGCTC TTTTTTCTTCTTAAT Ssed_3186 3845249 - 3844311 - | 4'-phosphopantetheinyl transferase TERM 3775 3844681 - 3844695 + g 70 -10 -3.13403 | opp_overlap 3844680 3844681, overlap 3844679 CAGAGGTCGAAGAAT CGCTCA CGT TGAGCG TCTTCATCCAGCGCC Ssed_3187 3845495 - 3847420 + | methyl-accepting chemotaxis protein-like protein Ssed_3188 3847575 - 3848828 + | HD domain-containing protein Ssed_3189 3849052 - 3849642 + | sigma-24 (FecI-like) TERM 3776 3849640 - 3849652 + F 83 -3.5 -5.64274 | opp_overlap 3849640 TACACACCACGAAAA TAAAA ATA TTTTA TTTTTTTATGCATCC Ssed_3190 3849791 - 3850798 + | permease Ssed_3191 3850803 - 3851039 + | thiol-disulfide isomerase/thioredoxin TERM 3777 3851282 - 3851302 + G 73 -5.3 -4.48987 | GGAGCAACATGTCGA GGGGGGCTA CTA TCGCTCCTC TTTTACTTCTCAAAG Ssed_3192 3851229 - 3851708 + | hypothetical protein TERM 3778 3851733 - 3851750 + F 79 -11.3 -2.56747 | opp_overlap 3851733, overlap 3851732 3851722 3851721 3851719 TAACTCATTGGAAAA TGGCCAG TCAA CTGGCCA CTATTCTGATGACTC TERM 3779 3851750 - 3851733 - f 93 -11.3 -4.15453 | opp_overlap 3851733 3851732 3851722 3851721 3851719 TAACTCATTGGAAAA TGGCCAG TCAA CTGGCCA CTATTCTGATGACTC Ssed_3193 3851960 - 3852163 + | hypothetical protein TERM 3780 3852202 - 3852241 + T 90 -11.6 -4.04719 | gap 1, opp_overlap 3852196 3852213 TAGCAGATAGTTTAA CGTCTTTGAAATGAGTCGG GGG TCGGCTCAAT-CAAAGACG TTTATACTCTCTCCT Ssed_3194 3853589 - 3852294 - | hypothetical protein Ssed_3195 3854269 - 3853586 - | putative ABC transporter, ATP-binding protein Ssed_3196 3855636 - 3854404 - | hypothetical protein Ssed_3197 3856909 - 3855626 - | hypothetical protein Ssed_3198 3857733 - 3856966 - | hypothetical protein TERM 3781 3858240 - 3858255 + H 70 -2.6 -5.17353 | TCACGTTGTAATTTT TTTGTT TGCC AACGAA TTTTTTACTCGGTAT TERM 3782 3858413 - 3858400 - H 90 -9.5 -4.40173 | ACGATAAAGGCAAAA CCGGG GTAA CCCGG CGACGCAAAACCAGT TERM 3783 3859004 - 3859021 + G 100 -11.3 -4.59109 | overlap 3859000 3858995 TACAGCCGGAGCCGG CGACCGA TGCT TCGGTCG TTTTTGAGCAGTGTG TERM 3784 3859753 - 3859743 - g 76 -8.2 -4.08948 | CAATGGTACAAACAA CGGC CTT GCCG ACCTGTATCGAGATG Ssed_3199 3858577 - 3861495 + | hypothetical protein TERM 3785 3861543 - 3861517 - T 82 -8.1 -4.61633 | opp_overlap 3861522, overlap 3861522 AGATACCGCTAAAAA TAAAATGCCTG CTTGT CAGGCATTTTT TATGGGCATCAGCCC TERM 3786 3861522 - 3861538 + T 91 -8 -5.252 | opp_overlap 3861517 3861522 CCGCTAAAAATAAAA TGCCTG CTTGT CAGGCA TTTTTTATGGGCATC TERM 3787 3861538 - 3861522 - T 91 -8 -5.26119 | opp_overlap 3861522, overlap 3861517 CCGCTAAAAATAAAA TGCCTG CTTGT CAGGCA TTTTTTATGGGCATC TERM 3788 3862026 - 3862051 + T 100 -13.4 -4.19506 | opp_overlap 3862026 CTGAGTTGTAAAAAA TAGGGCCACA CTTCTA TGTGGCCCTA TTTTAAACTTCAGCT TERM 3789 3862051 - 3862026 - T 100 -14.1 -5.03314 | opp_overlap 3862026 CTGAGTTGTAAAAAA TAGGGCCACAC TTCT ATGTGGCCCTA TTTTAAACTTCAGCT Ssed_3200 3864171 - 3862123 - | elongation factor G TERM 3790 3863681 - 3863655 - G 72 -10.2 -2.99056 | opp_overlap 3863654 3863663, overlap 3863654 3863674 AATGAAGATAACAAT CGACCACATCAT CTA ATGATGCTGTCG GTAAATTGACCGGCA TERM 3791 3865421 - 3865401 - g 71 -7.5 -4.0342 | overlap 3865404 GGCAACTAACAACAA GACGCCTGA AAA CCAGGCACC CAGCGGAGACTCATA Ssed_3201 3864571 - 3865437 + | transcriptional regulator, putative TERM 3792 3865678 - 3865663 - g 82 -5.4 -5.1101 | TGATCAGTGAAAAAA TCGATG CGAT CACCGA ATTGCCATCGACTCA TERM 3793 3866727 - 3866713 - g 70 -10 -3.22521 | opp_overlap 3866713 3866712 GTCACACTAAGTCAA CTGCAG GTA CTGCAG GTTTGATTAAGGCTG TERM 3794 3871088 - 3871056 - g 74 -9.9 -3.48063 | GAGCTAAACCCAGAA GATCTTGCCGAGTGT CGT ACACTGGGCGAAATC GTGAGCTATATGAAC TERM 3795 3872967 - 3872927 - g 100 -17.8 -3.59738 | opp_overlap 3872919, overlap 3872952 3872954 3872957 GATTAGAGCCTTAAA CCCTAATGCGATGGTCTT TATCC AAGACCACCGCATTAGCG GTAACCCTGTGCTCC TERM 3796 3873712 - 3873691 - g 73 -10.2 -3.12749 | overlap 3873683 GCAAGAACCTCAATA GCGCTTTC TTAAAC GAAAGCGC TAAAGGAGAGCAAGC Ssed_3202 3865437 - 3873731 + | erythronolide synthase TERM 3797 3873786 - 3873821 + G 81 -12.7 -2.77899 | opp_overlap 3873786 3873790, overlap 3873790 3873818 TCAGTGATCAAGTTA TCAAGAGTGAGATGC CACTGC GCATCGCACTCTTGG TGCTTCCTGCGCCAC TERM 3798 3873790 - 3873817 + G 73 -9.9 -3.29096 | opp_overlap 3873790 3873786, overlap 3873786 TGATCAAGTTATCAA GAGTGAGATGC CACTGC GCATCGCACTC TTGGTGCTTCCTGCG TERM 3799 3873817 - 3873790 - g 70 -9.9 -3.22884 | opp_overlap 3873786 3873790, overlap 3873786 TGATCAAGTTATCAA GAGTGAGATGC CACTGC GCATCGCACTC TTGGTGCTTCCTGCG TERM 3800 3874443 - 3874453 + G 74 -6.8 -4.38927 | opp_overlap 3874443 3874441 ACAGCGCAGATAAGA GCTG CAT CAGC TTTATTGTCTCCCAA TERM 3801 3875858 - 3875836 - g 71 -8.4 -3.75153 | opp_overlap 3875836 GCCCGTCAATGCAAA GGGCGGTGAT GAT ATCACTACCC TGCTTAAAGCATTAG Ssed_3203 3873731 - 3876028 + | omega-3 polyunsaturated fatty acid synthase PfaB TERM 3802 3878633 - 3878623 - g 80 -6.8 -4.72986 | CAGTCTCAGCAAAAA GCAG GCG CTGC AATCGTTGCTAATAG TERM 3803 3879073 - 3879048 - g 86 -13.3 -3.09327 | GCAGCTGACTCAAGA GGCTCATCAGG CATT CCTGAAGAGCC GTTCAGCCGGTATGA Ssed_3204 3876028 - 3881841 + | omega-3 polyunsaturated fatty acid synthase PfaC TERM 3804 3881890 - 3881918 + F 76 -4.6 -5.01732 | gap 1, opp_overlap 3881890 ATTTCTGTGTCAAAA GTGCTCA-CCTAT AGTC ATAGGCTGCGCGC TTTTTTCGGGAAATT Ssed_3205 3882033 - 3883658 + | 2-nitropropane dioxygenase, NPD TERM 3805 3883793 - 3883818 + T 93 -6.9 -5.46657 | gap 1, opp_overlap 3883793 ATAGAAAAAGCGAAA GCCATCGAGCAT TTA GTGCT-GGTGGC TTTTTTATTGAAGTA Ssed_3206 3885247 - 3883982 - | putative esterase TERM 3806 3885622 - 3885662 + H 72 -10.1 -2.5166 | opp_overlap 3885622 3885623, overlap 3885621 3885619 3885618 GTGTTTAATGGATAA TTCTTTTATTATGTAAACA ACT TGTTTATATAGTAAAAGAC CTGGTTTGTTTAGTA TERM 3807 3886505 - 3886495 - g 71 -4.6 -4.64657 | GGAAATTTTTAAAAA CGCC AAA AGCG ATTACCGTTTACATC Ssed_3207 3885693 - 3887117 + | divalent anion:sodium symporter family protein Ssed_3208 3887296 - 3888651 + | sensory transduction protein kinase Ssed_3209 3888638 - 3889111 + | putative chemotaxis protein CheY Ssed_3210 3889961 - 3889152 - | regulatory protein RecX TERM 3808 3890118 - 3890089 - R 75 -10.1 -3.13591 | opp_overlap 3890089 3890095, overlap 3890095 ATAAAATGGAGGTAA TAAAAAGCCCATC AATT GACGGGCTTGTTA TCTGTATCAAACTAA TERM 3809 3890112 - 3890095 - R 90 -9.1 -5.10461 | opp_overlap 3890089 3890095, overlap 3890089 TGGAGGTAATAAAAA GCCCATC AATT GACGGGC TTGTTATCTGTATCA Ssed_3211 3892357 - 3890171 - | hypothetical protein TERM 3810 3892607 - 3892584 - R 95 -11.8 -4.51238 | opp_overlap 3892584 TGTAGAAAACAGAAA GGGACGAAGT GAAC ACTTCATCCC TTTAGCTTCTGCGTC TERM 3811 3892584 - 3892607 + r 83 -9.6 -3.81339 | opp_overlap 3892584 TGTAGAAAACAGAAA GGGACGAAGT GAAC ACTTCATCCC TTTAGCTTCTGCGTC Ssed_3212 3894144 - 3892660 - | putative outer membrane protein Ssed_3213 3897229 - 3894146 - | putative efflux protein Ssed_3214 3898341 - 3897238 - | putative efflux protein TERM 3812 3898440 - 3898420 - R 70 -9.1 -3.23393 | overlap 3898401 3898418 3898421 GTGTATTGCACAACA CTGTCATGA TTT TCATGACAA AGTAGCGAGCTTAGG TERM 3813 3898439 - 3898421 - R 72 -10.4 -2.53822 | overlap 3898401 3898420 3898418 TGTATTGCACAACAC TGTCATGA TTT TCATGACA AAGTAGCGAGCTTAG Ssed_3215 3899322 - 3898432 - | putative transcriptional regulator protein TERM 3814 3899414 - 3899437 + r 87 -12.5 -3.33261 | opp_overlap 3899414 GCATTAACGAAAAAA GCTTAGCCG GGCAAA CGGCTAAGC TTAATGTATGACTCT TERM 3815 3899437 - 3899414 - R 100 -12.5 -5.30155 | opp_overlap 3899414 GCATTAACGAAAAAA GCTTAGCCG GGCAAA CGGCTAAGC TTAATGTATGACTCT Ssed_3216 3900682 - 3899480 - | tryptophan synthase subunit beta Ssed_3217 3903711 - 3900856 - | signal transduction protein TERM 3816 3902648 - 3902683 + g 81 -7.8 -4.564 | gap 1, opp_overlap 3902658 3902659, overlap 3902654 3902659 ATCGGGGTGCTATAC CATTCACAAATGATGGT CCT GCCATCTTTTGT-AATG TTTTCATTTGAACTT TERM 3817 3902659 - 3902673 + g 77 -6.4 -4.60713 | opp_overlap 3902659 3902658, overlap 3902654 3902648 ATACCATTCACAAAT GATGGT CCT GCCATC TTTTGTAATGTTTTC TERM 3818 3902936 - 3902946 + g 75 -3.2 -5.08169 | GTACTTTCCTGTAAT GCTG TCG TAGC TTTTTTGCGGTCTGT TERM 3819 3904162 - 3904141 - R 100 -14.5 -5.45802 | opp_overlap 3904141 TCTTCAAAACAAAAA GCCATCGAG TCTC CTCGATGGC TTTTATCTCGACGGG TERM 3820 3904141 - 3904162 + r 100 -14.5 -4.52589 | opp_overlap 3904141 TCTTCAAAACAAAAA GCCATCGAG TCTC CTCGATGGC TTTTATCTCGACGGG Ssed_3218 3906745 - 3904199 - | putative TonB-dependent receptor for Fe TERM 3821 3907167 - 3907146 - R 91 -13.1 -3.09516 | opp_overlap 3907148, overlap 3907148 GTGTTTATGATCGAA CAGGTGAGT GCGA ACTCACCTG ATTCGCCTGCTGTGA TERM 3822 3907165 - 3907148 - R 73 -9.9 -3.10796 | opp_overlap 3907148, overlap 3907146 GTTTATGATCGAACA GGTGAGT GCGA ACTCACC TGATTCGCCTGCTGT TERM 3823 3907148 - 3907165 + r 70 -9.9 -2.7419 | opp_overlap 3907148 3907146 GTTTATGATCGAACA GGTGAGT GCGA ACTCACC TGATTCGCCTGCTGT Ssed_3219 3907677 - 3907135 - | hypothetical protein TERM 3824 3907655 - 3907641 - G 71 -8.6 -3.75766 | CTGATAATGCAACAA CACTCA AAA TGAGTG CAGTAATCCAGGTGT TERM 3825 3907870 - 3907887 + r 72 -3.5 -5.08824 | TGTTCAATTGAAGAT GTTTTAT CTGA GTAAAAC TTTTTTCAATCAGAC TERM 3826 3907945 - 3907909 - R 71 -6.5 -4.26019 | CAATCAGACGCAAAA CCTCAACACATCGACAG AAA CTGACAATGTAAAGAGG TTAAGGCGATGACTA Ssed_3220 3910308 - 3908002 - | penicillin amidase TERM 3827 3910084 - 3910073 - G 79 -2.2 -5.44119 | TCCATCTGAAAAAAA CGGT CCTG ACCA TGGGCATAACCTAAT TERM 3828 3910129 - 3910115 - G 75 -11.4 -2.65766 | overlap 3910106 GCAAATGCCACATCA CGGCGA CTA TCGCCG CTCACAATCGCAGTA Ssed_3221 3911338 - 3910442 - | LysR family transcriptional regulator TERM 3829 3911721 - 3911744 + r 100 -16.8 -3.32993 | opp_overlap 3911721 AGTTAGTTACAAAAA CGGCCAACTG AATT CAGTTGGCCG TTAATATATAGATGC TERM 3830 3911744 - 3911721 - R 100 -16.8 -4.88067 | opp_overlap 3911721 AGTTAGTTACAAAAA CGGCCAACTG AATT CAGTTGGCCG TTAATATATAGATGC Ssed_3222 3912753 - 3911803 - | alpha/beta hydrolase domain-containing protein Ssed_3223 3913681 - 3913091 - | carnitine operon protein CaiE Ssed_3224 3914911 - 3914060 - | 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase TERM 3831 3915035 - 3915066 + r 79 -10.9 -3.21099 | gap 1, opp_overlap 3915036, overlap 3915036 AGATTTGAACGGATA ACTGTGGGA-CCGG GAGCA CCGGATCCCACAGA TTGGTACTAAGGCAA TERM 3832 3915036 - 3915065 + r 93 -14.4 -2.52516 | gap 1, opp_overlap 3915036, overlap 3915035 GATTTGAACGGATAA CTGTGGGA-CCGG GAGCA CCGGATCCCACAG ATTGGTACTAAGGCA TERM 3833 3915065 - 3915036 - R 100 -14.4 -3.42354 | gap 1, opp_overlap 3915036 3915035 GATTTGAACGGATAA CTGTGGGA-CCGG GAGCA CCGGATCCCACAG ATTGGTACTAAGGCA Ssed_3225 3915879 - 3915094 - | carnitinyl-CoA dehydratase Ssed_3226 3917504 - 3915951 - | putative crotonobetaine/carnitine-CoA ligase Ssed_3227 3918741 - 3917515 - | crotonobetainyl-CoA:carnitine CoA-transferase Ssed_3228 3920089 - 3918953 - | crotonobetainyl-CoA dehydrogenase Ssed_3229 3921690 - 3920146 - | L-carnitine/gamma-butyrobetaine antiporter TERM 3834 3921627 - 3921640 + g 71 -6.7 -4.22676 | GGAAGAAGATTTTCG GGTCA ATGG TGACC TTCTTCTTTGTTCCT TERM 3835 3921980 - 3921997 + H 72 -8.5 -3.59979 | GAACTTCTTATTCAG TGATCGT TATC ACGATCA TTTGAAATAGAAAAA Ssed_3230 3922807 - 3923580 + | putative electron transfer flavoprotein FixA TERM 3836 3924240 - 3924268 + G 79 -9.5 -3.84674 | CAGATGGTTGCCGAT CTCGGTGCTGCAC TTG GTGCAGAGCTGGG TTGTTCTCGTCCGAT Ssed_3231 3923589 - 3924533 + | electron transfer flavoprotein, alpha subunit TERM 3837 3924591 - 3924568 - f 91 -13.2 -3.05715 | opp_overlap 3924570, overlap 3924570 AATCTCCCGACGTAA CACCGGACAC ATTC ATGTCCGGTG TTAAAACCCAAATTA TERM 3838 3924589 - 3924570 - f 75 -10 -3.08679 | opp_overlap 3924570, overlap 3924568 TCTCCCGACGTAACA CCGGACAC ATTC ATGTCCGG TGTTAAAACCCAAAT Ssed_3232 3924625 - 3925917 + | FAD dependent oxidoreductase TERM 3839 3926165 - 3926154 - g 81 -5.8 -4.88388 | ACAATTTTAGAAAAA TGGG AATA CCCA AGAGGAACATTTGGT Ssed_3233 3925914 - 3926201 + | putative ferredoxin TERM 3840 3926214 - 3926234 + F 79 -10.5 -3.5241 | opp_overlap 3926202 3926213 3926214, overlap 3926202 3926212 TAACCATTTGGAAAC TGGGTGTTT ATA GAACACCCA TATTTCTGGCCCCTA TERM 3841 3926234 - 3926214 - f 71 -9.8 -2.75268 | opp_overlap 3926202 3926214 3926212, overlap 3926202 3926213 TAACCATTTGGAAAC TGGGTGTT TATAG AACACCCA TATTTCTGGCCCCTA TERM 3842 3926764 - 3926729 - g 89 -6.2 -5.33026 | opp_overlap 3926739, overlap 3926718 3926730 GAATTCAAAGAAAAA CTTCGATGATATGGAG TTTA CTCCACTTCATAGAAA AATAATGCTTTGGGG TERM 3843 3927452 - 3927442 - g 71 -4 -4.67353 | CTATCTATTTAAAAA GAAT TAT ATTC ATCGGCACCATATGG Ssed_3234 3926712 - 3928049 + | general substrate transporter Ssed_3235 3928419 - 3929552 + | hypothetical protein TERM 3844 3929667 - 3929686 + F 100 -9.3 -5.75342 | ACATCTTATGACCCA GCCTTCG CCCTAT CGAAGGC TTTTTTTTACCACCA TERM 3845 3930070 - 3930056 - g 75 -11.4 -2.62265 | overlap 3930055 3930053 3930058 ATTCAGACAGAAGAG GAGCGC CAA GCGCTC ACATTAGCGAGACGC TERM 3846 3931062 - 3931027 - g 74 -9.7 -3.46511 | gap 1 CGAGATAATCGAGAA GCTGCAACTCCGCGCC GTCGA GGC-CGGAGCTGCGAC TAAACAGAGCTGTGA Ssed_3236 3929723 - 3931357 + | methyl-accepting chemotaxis protein Ssed_3237 3931780 - 3931514 - | hypothetical protein Ssed_3238 3931968 - 3932219 + | hypothetical protein Ssed_3239 3932678 - 3932235 - | hypothetical protein Ssed_3240 3933999 - 3933091 - | transcriptional regulator Ssed_3241 3934167 - 3934601 + | hypothetical protein TERM 3847 3934684 - 3934654 - T 100 -14.9 -4.39998 | overlap 3934656 TAGTGAGAGAATAAA CATCAGGCCTCTA AAAAA TAGAGGCCTGATA CCAAACTTATAGCAT TERM 3848 3934682 - 3934656 - T 100 -15.3 -3.79864 | overlap 3934654 GTGAGAGAATAAACA TCAGGCCTCTA AAAAA TAGAGGCCTGA TACCAAACTTATAGC Ssed_3242 3937214 - 3934779 - | TonB-dependent receptor TERM 3849 3937014 - 3937024 + g 71 -8.2 -3.64703 | opp_overlap 3937013 3937014 ATCGACGATAACAAC CGCC GCT GGCG TTTCCATCAAAGACA TERM 3850 3937214 - 3937254 + r 73 -7.8 -3.8698 | gap 1, overlap 3937216 AACGAAATTGATTCA TCTGTTATCATCCCCTCAA ATAA TTGAGCGAATGATAAC-GA TTTGCATTTAGATTA TERM 3851 3937306 - 3937316 + r 75 -8.2 -4.10453 | overlap 3937306 ATACAAATATGTGCG CCCC ACT GGGG TTTTAGCGGGGTTTA Ssed_3243 3937975 - 3937439 - | hypothetical protein Ssed_3244 3939024 - 3938038 - | hypothetical protein TERM 3852 3938661 - 3938685 + g 79 -3.6 -5.31456 | gap 1 CGTCTGATTTAACAC CTTC-ACTGCT TGTC AGCAGTTGCAG TTTTTTCTGAGTTAG Ssed_3245 3939309 - 3939635 + | propeptide, PepSY amd peptidase M4 Ssed_3246 3939689 - 3940384 + | two component transcriptional regulator Ssed_3247 3940377 - 3941786 + | sensor histidine kinase Ssed_3248 3941930 - 3943351 + | hypothetical protein TERM 3853 3943413 - 3943440 + T 93 -11.4 -4.20136 | opp_overlap 3943414 3943418, overlap 3943414 3943418 CAATATAATCAACCA AGAAATACCGCT ACTT AGCGGTATTTCC TTTGGTTTTAACCCT TERM 3854 3943414 - 3943439 + T 100 -14.9 -3.11359 | opp_overlap 3943414 3943418, overlap 3943413 3943418 AATATAATCAACCAA GAAATACCGCT ACTT AGCGGTATTTC CTTTGGTTTTAACCC TERM 3855 3943439 - 3943414 - T 100 -14.9 -3.49738 | opp_overlap 3943414 3943413 3943418, overlap 3943418 AATATAATCAACCAA GAAATACCGCT ACTT AGCGGTATTTC CTTTGGTTTTAACCC TERM 3856 3943418 - 3943435 + T 89 -9.9 -4.20288 | opp_overlap 3943414 3943418, overlap 3943414 3943413 TAATCAACCAAGAAA TACCGCT ACTT AGCGGTA TTTCCTTTGGTTTTA TERM 3857 3943435 - 3943418 - T 90 -9.9 -4.36343 | opp_overlap 3943418 3943414 3943413, overlap 3943414 TAATCAACCAAGAAA TACCGCT ACTT AGCGGTA TTTCCTTTGGTTTTA Ssed_3249 3943998 - 3943486 - | hypothetical protein Ssed_3250 3944663 - 3944091 - | cyclic nucleotide-binding protein Ssed_3251 3944786 - 3946369 + | catalase Ssed_3252 3946790 - 3947164 + | AnkB protein Ssed_3253 3947994 - 3947230 - | amino acid ABC transporter periplasmic protein Ssed_3254 3948375 - 3949778 + | hypothetical protein Ssed_3255 3949993 - 3950508 + | GCN5-related N-acetyltransferase TERM 3858 3950553 - 3950588 + T 71 -6 -4.20806 | opp_overlap 3950560, overlap 3950560 AACAACACGTTAAAA TAAAAAACCGGGAGCC GTTT GGCTCCCGGTTTACAC TTTCCTTTTCGAATC TERM 3859 3950560 - 3950581 + T 100 -17.3 -3.74781 | opp_overlap 3950560, overlap 3950553 CGTTAAAATAAAAAA CCGGGAGCC GTTT GGCTCCCGG TTTACACTTTCCTTT TERM 3860 3950581 - 3950560 - T 100 -17.3 -5.79595 | opp_overlap 3950560 3950553 CGTTAAAATAAAAAA CCGGGAGCC GTTT GGCTCCCGG TTTACACTTTCCTTT Ssed_3256 3952284 - 3950608 - | methyl-accepting chemotaxis protein TERM 3861 3952015 - 3952026 + g 74 -3 -5.03961 | GATATCATCGACTTT CTTA CTGA TAAG TTTTGTTCTTTGATT Ssed_3257 3953209 - 3952313 - | hypothetical protein Ssed_3258 3955154 - 3953508 - | amidohydrolase 3 TERM 3862 3955255 - 3955231 - R 100 -14.4 -5.89827 | AATCATCAAAAAAAA TGCCAGTCAC TCGCG GTGACTGGCA TTGCCCTGGACTAAT Ssed_3259 3956937 - 3955327 - | hypothetical protein Ssed_3260 3958384 - 3957500 - | AraC family transcriptional regulator Ssed_3261 3960501 - 3958393 - | GGDEF domain-containing protein TERM 3863 3958456 - 3958468 + gr 85 -9.1 -4.22948 | opp_overlap 3958455, overlap 3958445 TTTGGCCACATACAT GGCTG TAT CAGCC TTTTGCATCAATTTT Ssed_3262 3961828 - 3960467 - | hypothetical protein Ssed_3263 3962425 - 3962000 - | hypothetical protein Ssed_3264 3962654 - 3964324 + | putative sulfatase Ssed_3265 3965134 - 3964436 - | putative ribosomal small subunit pseudouridine synthase A TERM 3864 3965201 - 3965183 - R 93 -7.4 -5.46657 | opp_overlap 3965183 3965195 CAGGCCAATAAAAAA GGACTCAC TAT GTAAGCCC CTTATTGAGTTGAAT Ssed_3266 3966879 - 3965260 - | putative uncharacterized dehydrogenase TERM 3865 3966953 - 3966913 - H 81 -12 -2.87564 | opp_overlap 3966913, overlap 3966919 TTACTTGGTTATATA CCCAAACCACTTCAATAT GCAGA ATTCCGAAGTGGCTTGGG TATAGTCAAAAATAA Ssed_3267 3967151 - 3967474 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_3268 3967999 - 3968361 + | antibiotic biosynthesis monooxygenase Ssed_3269 3968717 - 3970519 + | response regulator Ssed_3270 3971091 - 3970549 - | hypothetical protein Ssed_3271 3971382 - 3972086 + | purine nucleoside phosphorylase Ssed_3272 3972230 - 3973408 + | hypothetical protein TERM 3866 3973655 - 3973685 + T 100 -21.4 -4.78661 | opp_overlap 3973648 3973650 3973647 CTGAAAACGATCTGA GCCCTGCAAGTTTT ACC AAAACTTGCAGGGC TTTTCATTTTTACAT Ssed_3273 3974455 - 3973739 - | cyclic nucleotide binding protein, putative Ssed_3274 3974736 - 3975599 + | putative lipoprotein TERM 3867 3975690 - 3975716 + T 80 -10.2 -3.72374 | opp_overlap 3975690 3975689 3975691, overlap 3975688 3975691 GCATTTAAAAAGAAT CCCCGATATTCA CAT TGGATATCGGGC TCTTTCTTAATACCA TERM 3868 3975715 - 3975691 - T 79 -11.5 -2.54902 | opp_overlap 3975690 3975688 3975691, overlap 3975690 3975689 CATTTAAAAAGAATC CCCGATATTCA CAT TGGATATCGGG CTCTTTCTTAATACC TERM 3869 3975691 - 3975715 + T 91 -13.7 -2.82942 | opp_overlap 3975691 3975690 3975689, overlap 3975690 3975688 CATTTAAAAAGAATC CCCGATATTCA CAT TGGATATCGGG CTCTTTCTTAATACC Ssed_3275 3976559 - 3975777 - | AraC/XylS family transcriptional regulator Ssed_3276 3976661 - 3977818 + | multidrug resistance protein D TERM 3870 3977868 - 3977849 - T 100 -13.6 -5.28176 | TTTAGTCATAAAAAA GAGGAGCC TTTT GGCTCCTC GACACTTTAATAACG Ssed_3277 3978960 - 3977917 - | hypothetical protein Ssed_3278 3980466 - 3979642 - | hypothetical protein TERM 3871 3980592 - 3980575 - R 70 -9.1 -3.18849 | opp_overlap 3980575, overlap 3980573 TTGATAGCAGTAAGA GCCGCTC GATA AAGCGGC TTAGATACGTTTCCC Ssed_3279 3981882 - 3980623 - | putative lipoprotein Ssed_3280 3982093 - 3982779 + | DNA-binding response regulator Ssed_3281 3982772 - 3984223 + | sensor histidine kinase TERM 3872 3984218 - 3984240 + T 87 -6.2 -5.32882 | overlap 3984221 3984224 AACTGTTCCGGTACG GGTTAAGCGG CTC CCGCTTGCTC TTTTTTCTCCTGCTC TERM 3873 3984224 - 3984234 + T 70 -8.2 -3.69405 | overlap 3984221 3984218 TCCGGTACGGGTTAA GCGG CTC CCGC TTGCTCTTTTTTCTC Ssed_3282 3984678 - 3984220 - | hypothetical protein Ssed_3283 3984893 - 3986182 + | O-acetylhomoserine aminocarboxypropyltransferase Ssed_3284 3986440 - 3988377 + | diguanylate cyclase/phosphodiesterase with GAF sensor Ssed_3285 3989231 - 3988497 - | hypothetical protein TERM 3874 3989814 - 3989831 + H 73 -7.1 -4.00532 | opp_overlap 3989814 TCATTCTGGAAAAAA CAAACAT ATTA ATGTTTG TTTAATATTTGAAGC TERM 3875 3989831 - 3989814 - H 86 -7.1 -5.02074 | opp_overlap 3989814 TCATTCTGGAAAAAA CAAACAT ATTA ATGTTTG TTTAATATTTGAAGC TERM 3876 3991884 - 3991901 + G 74 -9.9 -3.53012 | opp_overlap 3991887, overlap 3991887 ACACGTAATACCCAT GAAGTCG ACGC CGACTTC TTTGCCACCAGCCCG Ssed_3286 3989985 - 3992129 + | hypothetical protein TERM 3877 3992235 - 3992218 - f 73 -5.5 -4.62102 | opp_overlap 3992218, overlap 3992213 AGAAAAATAGTAAAA GGTCTGA GTAT TCAGGCC TTTTTATTTTCCCAT TERM 3878 3992218 - 3992235 + F 93 -7.7 -5.46706 | opp_overlap 3992218 3992213 AGAAAAATAGTAAAA GGTCTGA GTAT TCAGGCC TTTTTATTTTCCCAT Ssed_3287 3992348 - 3993964 + | peptidase S41 Ssed_3288 3993988 - 3994368 + | hypothetical protein TERM 3879 3994396 - 3994419 + F 100 -15.4 -4.74706 | opp_overlap 3994396 3994398 AGTTAATCGATCATA CAGGCCGTAA CCTA TTACGGCCTG TTTTTGCCTCTTCCA TERM 3880 3994419 - 3994396 - f 95 -15.4 -2.83112 | opp_overlap 3994396, overlap 3994398 AGTTAATCGATCATA CAGGCCGTAA CCTA TTACGGCCTG TTTTTGCCTCTTCCA TERM 3881 3994417 - 3994398 - f 82 -12.2 -2.9627 | opp_overlap 3994396, overlap 3994396 TTAATCGATCATACA GGCCGTAA CCTA TTACGGCC TGTTTTTGCCTCTTC TERM 3882 3995623 - 3995610 - g 70 -9.5 -3.21912 | CGTCCAATGGAGCAA GGGGG AATA CCCCC AGGCGAACCAGCAAC Ssed_3289 3994612 - 3997599 + | PKD repeat-containing protein TERM 3883 3997658 - 3997687 + T 100 -13.7 -5.38326 | opp_overlap 3997664, overlap 3997664 CACGCTTGTCATAAT AAAAAACCGCAGC GAAG GCTGCGGTTTTTA TTTTTCTTTAATTAA TERM 3884 3997664 - 3997681 + T 100 -12.7 -5.77734 | opp_overlap 3997664, overlap 3997658 TGTCATAATAAAAAA CCGCAGC GAAG GCTGCGG TTTTTATTTTTCTTT TERM 3885 3997681 - 3997664 - T 100 -12.7 -5.55769 | opp_overlap 3997664 3997658 TGTCATAATAAAAAA CCGCAGC GAAG GCTGCGG TTTTTATTTTTCTTT Ssed_3290 3999579 - 3997753 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 3886 3999319 - 3999336 + g 70 -7.7 -3.89614 | overlap 3999320 CATCAGGTGACGACG TTGGTCG GCTT CGACCAG TTTAATGTGTGGGTT Ssed_3291 3999883 - 4000554 + | hypothetical protein Ssed_3292 4000612 - 4001280 + | putative glutathione S-transferase Ssed_3293 4001551 - 4002342 + | amino acid ABC transporter periplasmic protein Ssed_3294 4003045 - 4002374 - | 6-O-methylguanine DNA methyltransferase Ssed_3295 4003559 - 4004938 + | Fmu (Sun) domain-containing protein TERM 3887 4004993 - 4004967 - T 100 -15.2 -4.59081 | opp_overlap 4004967 4004972, overlap 4004972 TAAAGTGAGATAAAA GAAAAGGCGGCC TCG GGTCGCCTTTTC TTTACGAACCAGCCC TERM 3888 4004967 - 4004993 + T 100 -17.4 -3.53012 | opp_overlap 4004967 4004972, overlap 4004972 TAAAGTGAGATAAAA GAAAAGGCGGCC TCG GGTCGCCTTTTC TTTACGAACCAGCCC TERM 3889 4004972 - 4004988 + T 95 -11.5 -4.86731 | opp_overlap 4004967 4004972, overlap 4004967 TGAGATAAAAGAAAA GGCGGCC TCG GGTCGCC TTTTCTTTACGAACC TERM 3890 4004988 - 4004972 - T 93 -9.3 -5.23292 | opp_overlap 4004972 4004967, overlap 4004967 TGAGATAAAAGAAAA GGCGGCC TCG GGTCGCC TTTTCTTTACGAACC TERM 3891 4005326 - 4005310 - T 78 -10.9 -3.07233 | TCAGAAGCGTCAATA CTTCGAG GGG CTCGAAG GTGAGTATCAGGAGC Ssed_3296 4006960 - 4005437 - | diguanylate cyclase TERM 3892 4007339 - 4007302 - R 72 -9.9 -2.93901 | opp_overlap 4007334 ATGTCAGGAAGGATA GCCGCGTAACAATCCTA TGAT TGGGACTGTTACGCAGA ATAAATGCGATTTTT Ssed_3297 4007930 - 4007391 - | YfaZ family protein TERM 3893 4008160 - 4008130 - H 70 -7.7 -3.73775 | gap 1, opp_overlap 4008140 4008141, overlap 4008131 4008140 TTCAGCGCTACGAAA CGCCAATTGAGTTG CGCG CAACTCACTTG-CG CACAATGGTCTATGT Ssed_3298 4008210 - 4008695 + | glutathione peroxidase TERM 3894 4008860 - 4008879 + T 89 -5.6 -5.47218 | opp_overlap 4008858, overlap 4008858 4008861 TCTTTCGAGATCATC AGGCAGCC AGAT GGTTGCCC TTTTTTTGCCTGCAG TERM 3895 4008861 - 4008878 + T 79 -9.1 -3.87608 | opp_overlap 4008858, overlap 4008858 4008860 CTTTCGAGATCATCA GGCAGCC AGAT GGTTGCC CTTTTTTTGCCTGCA TERM 3896 4009170 - 4009200 + T 72 -9.2 -3.35046 | opp_overlap 4009176, overlap 4009169 ATGGCATCCCAACTC GATAGAGAAAATGG ATG CCATTTTTTTTGTC TGTTTAAAGCAGTGA Ssed_3299 4011094 - 4009301 - | peptidase M1, membrane alanine aminopeptidase TERM 3897 4010354 - 4010319 - G 78 -7.7 -4.35524 | gap 1 CCCCCAAACGGAAAA CTGGGCGGCAATACAA TCATG TCATATCGCC-CCCAG GGGTAGGGCCCTAGC Ssed_3300 4011249 - 4012133 + | collagenase TERM 3898 4012374 - 4012396 + T 100 -13.5 -5.75342 | TTATCGAACTTTTTA TGGCAACCC GATAA GGGTTGCCA TTTTTTTTGCCCGCG TERM 3899 4012773 - 4012795 + T 100 -13.5 -5.77853 | TTATCGAACTTTTTA TGGCAACCC GATAA GGGTTGCCA TTTTTTTTACCCATT TERM 3900 4013226 - 4013248 + T 100 -13.5 -5.77853 | TTATCGAACTTTTTA TGGCAACCC GATAA GGGTTGCCA TTTTTTTTGCCCGTT TERM 3901 4013609 - 4013625 + T 100 -5.8 -6.11644 | TCTTGGAACTTGTAA CGACCT TAATC GGGTCG TTTTTTTTTGCCTGA TERM 3902 4013786 - 4013761 - T 100 -14.9 -3.90744 | opp_overlap 4013766, overlap 4013766 TTTTTGTCTAAACAA TAAAAGGCCTC TTAT GAGGCCTTTTA AATAGCATTCTTTAA TERM 3903 4013766 - 4013781 + T 89 -10.4 -4.19704 | opp_overlap 4013761 4013766 GTCTAAACAATAAAA GGCCTC TTAT GAGGCC TTTTAAATAGCATTC TERM 3904 4013781 - 4013766 - T 93 -10.4 -5.00196 | opp_overlap 4013766, overlap 4013761 GTCTAAACAATAAAA GGCCTC TTAT GAGGCC TTTTAAATAGCATTC Ssed_3301 4014822 - 4013851 - | phosphate binding protein Ssed_3302 4016379 - 4015060 - | putative PAS/PAC sensor protein TERM 3905 4016188 - 4016159 - G 70 -9.9 -3.11584 | overlap 4016157 4016155 ATACCATTGAATACA CCCTCCCAGCTGC CACT GCCGTTGGGAGGA GTTAAACGCCTGTCA Ssed_3303 4017164 - 4016475 - | two component transcriptional regulator TERM 3906 4017369 - 4017384 + r 79 -10.4 -3.5861 | opp_overlap 4017369, overlap 4017365 GACAAAAACGCAAAA GGAGGC CGAA GCCTCC TTGATTCTTATCGCT TERM 3907 4017384 - 4017369 - R 91 -10.4 -4.5115 | opp_overlap 4017369 4017365 GACAAAAACGCAAAA GGAGGC CGAA GCCTCC TTGATTCTTATCGCT Ssed_3304 4018355 - 4017411 - | porin TERM 3908 4017920 - 4017936 + g 85 -12.3 -3.33261 | opp_overlap 4017916 GAGTGATATAAGTGG CCGTCTG AGC CAGACGG TTCTCACCCTTAAAC Ssed_3305 4018390 - 4018665 + | hypothetical protein TERM 3909 4018827 - 4018807 - g 76 -9.7 -3.75845 | GAAAACAAGGCCAAA CACTGGTAC ACA GTGCCAGTG AAAGACACCTTATCT Ssed_3306 4018647 - 4019558 + | recombination associated protein TERM 3910 4019581 - 4019595 + T 100 -12.8 -4.7497 | opp_overlap 4019581 CATGCTGTAAAAAAA GGCGCC TAA GGCGCC TTTTTACTAACTCAA TERM 3911 4019595 - 4019581 - T 100 -12.8 -5.41143 | opp_overlap 4019581 CATGCTGTAAAAAAA GGCGCC TAA GGCGCC TTTTTACTAACTCAA Ssed_3307 4021439 - 4019643 - | peptidase M61 domain-containing protein TERM 3912 4020455 - 4020423 - G 74 -2.6 -5.04385 | CAGATCGTCAAAAAA CTCCTTCACAGTGA TCACC CCGGCGCGAAGGAG TAACTGACTCTGAAA TERM 3913 4021909 - 4021897 - g 75 -5.5 -4.77778 | AATAAATACACAAAA GCAGA ATC CCTGC TCAAACTACTCGAAG TERM 3914 4022327 - 4022307 - g 73 -4.7 -4.67943 | overlap 4022309 CTCGAATAGACAAAA TAGGCCTTT TTT AAAAGCCGA CCTTCAACTTAAAAT Ssed_3308 4021615 - 4023771 + | TPR repeat-containing protein TERM 3915 4024675 - 4024663 - g 74 -6.3 -4.41548 | GTAGAGTTTAGAAAA GATCA GCG TGATC AAGTACTCGTTATCA Ssed_3309 4024096 - 4025640 + | diguanylate cyclase Ssed_3310 4025750 - 4027102 + | hypothetical protein TERM 3916 4027433 - 4027423 - g 83 -4.6 -5.32882 | GAGGACTATAAAAAA GGCC GAA AGCC TATGCCGGAAGCCTT Ssed_3311 4027213 - 4027980 + | exonuclease IX Ssed_3312 4028140 - 4028553 + | hypothetical protein TERM 3917 4028549 - 4028579 + F 85 -2.7 -5.72053 | gap 1, overlap 4028551 4028553 4028556 GTAGCAATACCGATA TCTGAT-AGCCTTC GAAT GAAGGCTGATTACA TTTTTTCTTTGGTTC TERM 3918 4028617 - 4028633 + F 75 -9.5 -3.35197 | ATTGGAATGTGTGTT TGAAGGT TGT ACCTTCA TTGCTGTCTATCGCC TERM 3919 4029059 - 4029080 + G 83 -7.3 -4.82901 | overlap 4029061 TTGTTTTGCTCTCAG TCGTAGCTG GTGT CAGCTACTA TTTTTATGACGAGAA TERM 3920 4029061 - 4029078 + G 81 -9.9 -4.03995 | overlap 4029059 GTTTTGCTCTCAGTC GTAGCTG GTGT CAGCTAC TATTTTTATGACGAG Ssed_3313 4029004 - 4029531 + | hypothetical protein TERM 3921 4029634 - 4029657 + T 81 -7.5 -4.52589 | TAACCAAAAGCTCAT GAGTTAGAG GCTAAG CTCTGACTC TTTTGTGTCCACAAA TERM 3922 4029946 - 4029933 - T 73 -2.4 -5.32944 | opp_overlap 4029938 TCGATAAGTAAAAAA TGGT GTTGCA ACCA GAAGGTTTGCAATCT Ssed_3314 4030563 - 4029964 - | ribosomal-protein-alanine acetyltransferase Ssed_3315 4031046 - 4030567 - | hypothetical protein Ssed_3316 4031754 - 4031095 - | multiple antibiotic resistance protein TERM 3923 4031840 - 4031824 - R 93 -5.8 -5.60993 | opp_overlap 4031824 CTGTCCATAAAAAAA CCGAGC AATAA ACTCGG CTTTTATTTTATTAT Ssed_3317 4034752 - 4031879 - | peptidase S9 prolyl oligopeptidase TERM 3924 4033326 - 4033310 - G 71 -6.5 -4.22927 | opp_overlap 4033309 GTAGTAAGAGACAAA TCGCTCC TTA GGAGAGA GGTTTGGCGCTTCAT TERM 3925 4034439 - 4034424 - G 73 -3.2 -4.90918 | gap 1, opp_overlap 4034426, overlap 4034419 4034425 4034426 ACAAAAGCAACAAAA CG-GCCG TCT CGGCTCA CTTTAGGCTTAGAAC TERM 3926 4034852 - 4034837 - H 87 -3.2 -5.74122 | opp_overlap 4034838, overlap 4034838 CACTATATAAAAAAA TGTGAG ATTG CTCACT ATTTTCTGTAAAATT TERM 3927 4034851 - 4034838 - H 71 -6.7 -4.02846 | opp_overlap 4034838, overlap 4034837 ACTATATAAAAAAAT GTGAG ATTG CTCAC TATTTTCTGTAAAAT Ssed_3318 4034985 - 4035992 + | isocitrate dehydrogenase TERM 3928 4036145 - 4036122 - T 100 -15.4 -4.2349 | opp_overlap 4036122 GTTCCATACGCAAAA GGCCCTATGT TTTC ACATAGGGCC TTTTTATTGAATCTA TERM 3929 4036122 - 4036145 + T 100 -15.4 -5.12068 | opp_overlap 4036122 GTTCCATACGCAAAA GGCCCTATGT TTTC ACATAGGGCC TTTTTATTGAATCTA Ssed_3319 4037254 - 4036172 - | putative RNA 2'-O-ribose methyltransferase TERM 3930 4037310 - 4037284 - R 87 -5.1 -5.4833 | opp_overlap 4037284, overlap 4037272 4037297 CCAGCCAATAAAAAA TGGCGACAATC GATAT AATGGCCGCCA TTCTACACTGTATAT Ssed_3320 4037854 - 4037465 - | hypothetical protein Ssed_3321 4038521 - 4037847 - | dienelactone hydrolase Ssed_3322 4039413 - 4038502 - | DNA-binding transcriptional activator GcvA Ssed_3323 4039595 - 4039822 + | hypothetical protein TERM 3931 4039872 - 4039844 - T 72 -9.5 -3.04398 | opp_overlap 4039844, overlap 4039843 TCTCTTCGTTAAAAG CCGCGTCGCTACT CAT ACTAGCATCGCGG TTTTTTTGTGTCTGT TERM 3932 4039844 - 4039872 + T 100 -7.3 -5.77988 | opp_overlap 4039844 4039843 TCTCTTCGTTAAAAG CCGCGTCGCTACT CAT ACTAGCATCGCGG TTTTTTTGTGTCTGT TERM 3933 4040021 - 4039997 - T 100 -10.7 -5.76633 | opp_overlap 4039997 GCAGATATAAAAAAA GCCGCGACCAT AAA ATAGTTGCGGC TTTTTAAATTCAGTA TERM 3934 4039997 - 4040021 + T 93 -10.7 -4.75174 | opp_overlap 4039997 GCAGATATAAAAAAA GCCGCGACCAT AAA ATAGTTGCGGC TTTTTAAATTCAGTA Ssed_3324 4041544 - 4040090 - | thiamine biosynthesis protein ThiI TERM 3935 4041662 - 4041699 + r 90 -8.6 -4.91511 | opp_overlap 4041663 4041668, overlap 4041665 CCACTTCAATAAGGG AGATAAGGCTGGAAAG TTTACC TTTTCCAGCCTTATTA TTTTTCTGGTGCAGT TERM 3936 4041665 - 4041696 + r 100 -12.5 -4.56153 | opp_overlap 4041663 4041668, overlap 4041662 CTTCAATAAGGGAGA TAAGGCTGGAAAG TTTACC TTTTCCAGCCTTA TTATTTTTCTGGTGC TERM 3937 4041693 - 4041668 - R 74 -9.1 -3.57629 | opp_overlap 4041665 4041662, overlap 4041663 CAATAAGGGAGATAA GGCTGGAAA GTTTACCT TTTCCAGCC TTATTATTTTTCTGG Ssed_3325 4042718 - 4041741 - | flagellar motor protein MotB Ssed_3326 4043490 - 4042723 - | flagellar motor protein PomA TERM 3938 4043419 - 4043409 - G 73 -3.2 -4.91459 | GAACATCGATAAAAA TGGC AAT ACCA CCACTGCTGACCATC Ssed_3327 4043925 - 4044164 + | exodeoxyribonuclease VII, small subunit TERM 3939 4044383 - 4044357 - g 73 -5 -4.82901 | overlap 4044358 GTTGCGCCAGAAAAA CTCGACGCCTGC GCG GCCGCCATCGAA TGTGTTCATGCTTAT TERM 3940 4044713 - 4044703 - g 70 -2.4 -4.84527 | TGCATAGATTAAAAA CCGG CGC CCTG ATCCGTTGCGCAGTT Ssed_3328 4044165 - 4045046 + | polyprenyl synthetase Ssed_3329 4045067 - 4046932 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 3941 4046981 - 4046998 + T 100 -11.3 -5.65177 | opp_overlap 4046981 ACGCTCAATAAAAAA GGACTGC AGAT GCAGTCC TTTTTTTATCAATCT TERM 3942 4046998 - 4046981 - T 100 -11.3 -5.45652 | opp_overlap 4046981 ACGCTCAATAAAAAA GGACTGC AGAT GCAGTCC TTTTTTTATCAATCT Ssed_3330 4047661 - 4047032 - | GrpE protein TERM 3943 4048457 - 4048442 - g 71 -4.6 -4.4891 | overlap 4048444 TGTAGCACCATAAAA CTGGTG GTAT CACCGG ATAACGGTGATAACC Ssed_3331 4047710 - 4048633 + | NAD(+) kinase TERM 3944 4048677 - 4048661 - T 93 -12.3 -4.0371 | opp_overlap 4048661 4048676 GATGCTGTATATAAA GCCGCTA ACT TAGCGGC TTTTCTTTACTAGGA TERM 3945 4048661 - 4048677 + T 100 -12.3 -4.93877 | opp_overlap 4048661, overlap 4048676 GATGCTGTATATAAA GCCGCTA ACT TAGCGGC TTTTCTTTACTAGGA Ssed_3332 4049785 - 4048697 - | TonB family protein TERM 3946 4049132 - 4049153 + g 93 -8 -5.18726 | TTTCACCACCTCATT CAGCAGGG GGATCG CTCTGCTG TTTTTCTTCTCGACG Ssed_3333 4051279 - 4049933 - | multi anti extrusion protein MatE TERM 3947 4050189 - 4050207 + g 73 -9.6 -3.36135 | AAGTAGAGTCGCATC CCCTCTAT GGC ATAGGGGG TTAGTTGCGGGTTAT TERM 3948 4050637 - 4050627 - G 73 -5.4 -4.51743 | TTAGCAGTAAAGAAA TGCT GTA AGCA GAGTAAGCCGGTGAC Ssed_3334 4052388 - 4051333 - | cobalamin synthesis protein, P47K TERM 3949 4051578 - 4051567 - G 77 -4.4 -5.10461 | CTCATCGAATAAAAA CTCA TAAC TGAG ATCGAATATCCAACC TERM 3950 4051729 - 4051754 + g 74 -11.1 -2.87931 | overlap 4051734 CTGTTTGGTTCCGGC GGTAGGCGCAG GAAT CTGCGCTTTCC TGTCTAACAGGTCAA TERM 3951 4051734 - 4051749 + g 82 -10.4 -3.88498 | overlap 4051729 TGGTTCCGGCGGTAG GCGCAG GAAT CTGCGC TTTCCTGTCTAACAG TERM 3952 4053987 - 4054005 + G 73 -7.4 -4.24342 | overlap 4053990 GCGTATTCTGGCCGG CAACCTTC GAA GAAGGTCG TTTATTGATGAACGA Ssed_3335 4052708 - 4054099 + | hypothetical protein TERM 3953 4054160 - 4054130 - T 100 -19.2 -5.1675 | opp_overlap 4054130 CCAGTTACTAAAAAA CCGCCCCCATTTAT TAT ATAAATAGGGGCGG TTTTTTTATCTTTGT TERM 3954 4054130 - 4054160 + T 100 -17 -5.90231 | opp_overlap 4054130 CCAGTTACTAAAAAA CCGCCCCCATTTAT TAT ATAAATAGGGGCGG TTTTTTTATCTTTGT Ssed_3336 4055477 - 4054188 - | DEAD/DEAH box helicase domain-containing protein Ssed_3337 4058592 - 4055530 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 3955 4058280 - 4058262 - G 77 -3.1 -5.21709 | gap 1, overlap 4058265 4058266 GGCCAGAGGAAAAAA TGATGCCG ATTC CGGC-CCA CCAGCCACTTCCTCC Ssed_3338 4058895 - 4059677 + | amino acid ABC transporter Ssed_3339 4059809 - 4060255 + | thioesterase superfamily protein Ssed_3340 4061796 - 4060294 - | diguanylate cyclase/phosphodiesterase Ssed_3341 4062708 - 4061866 - | putative signal transduction protein TERM 3956 4062974 - 4062944 - H 75 -9.8 -3.39668 | gap 1, opp_overlap 4062943 4062944 CTCTAAATTTGATAA CAGGCGTGGCATT GAGTAA AATGCC-CGCCCG CTTGTTATCGCTAAC Ssed_3342 4063001 - 4064386 + | peptidase U32 Ssed_3343 4064404 - 4064661 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3957 4064702 - 4064668 - T 78 -7.3 -4.40561 | gap 1, opp_overlap 4064669 4064674, overlap 4064665 4064669 GTCGTGTAAAAATAA TTGAAACCTGTG-AGA ACAC CCTTCACAGGTTTCAT CTTATTTCCGCACTG TERM 3958 4064701 - 4064669 - T 79 -10.8 -3.23855 | gap 1, opp_overlap 4064669 4064674, overlap 4064668 4064665 TCGTGTAAAAATAAT TGAAACCTGTG-AGA ACAC CCTTCACAGGTTTCA TCTTATTTCCGCACT TERM 3959 4064669 - 4064701 + T 88 -11.5 -3.54755 | opp_overlap 4064669 4064668 4064665, overlap 4064674 TCGTGTAAAAATAAT TGAAACCTGTGAG AACACCC TTCACAGGTTTCA TCTTATTTCCGCACT Ssed_3344 4068005 - 4064838 - | signal transduction protein TERM 3960 4065486 - 4065474 - G 70 -7.7 -3.9534 | AGCCATATTGATAAA CTCTC CGG GAGAG AGCAAGCCTTTATCC Ssed_3345 4068360 - 4068719 + | hypothetical protein Ssed_3346 4070073 - 4068820 - | response regulator/GGDEF domain-containing protein TERM 3961 4070172 - 4070133 - R 73 -5.8 -4.51994 | opp_overlap 4070137, overlap 4070135 4070137 TGAACTAACAATAAA TATAGCCTAAAACCAAAC GATG ACTTGGTTTTAGGCTTCT CACGAAAAATATTAC TERM 3962 4070170 - 4070135 - R 86 -10.6 -3.85474 | opp_overlap 4070137, overlap 4070133 4070137 AACTAACAATAAATA TAGCCTAAAACCAAAC GATG ACTTGGTTTTAGGCTT CTCACGAAAAATATT TERM 3963 4070137 - 4070168 + r 86 -11.8 -3.28924 | opp_overlap 4070135 4070133 4070137 CTAACAATAAATATA GCCTAAAACCAA ACGATGAC TTGGTTTTAGGC TTCTCACGAAAAATA TERM 3964 4070168 - 4070137 - R 95 -13.2 -3.49065 | opp_overlap 4070137, overlap 4070135 4070133 CTAACAATAAATATA GCCTAAAACCAAAC GATG ACTTGGTTTTAGGC TTCTCACGAAAAATA Ssed_3347 4071936 - 4070227 - | acyl-CoA dehydrogenase-like protein Ssed_3348 4074063 - 4072297 - | formyl transferase-like protein TERM 3965 4073247 - 4073257 + g 73 -5.4 -4.61566 | ATTTAATAAAGGATT GAGA CTC TCTC TTTTGTCGTTTCAAA TERM 3966 4074128 - 4074111 - R 100 -11.3 -5.29716 | opp_overlap 4074111 TGAAGATAATAAAAA CGGAACC AAAG GGTTCCG TTATTTTACAAATAC TERM 3967 4074111 - 4074128 + r 93 -11.3 -4.18506 | opp_overlap 4074111 TGAAGATAATAAAAA CGGAACC AAAG GGTTCCG TTATTTTACAAATAC Ssed_3349 4074659 - 4074147 - | hypothetical protein TERM 3968 4074891 - 4074877 - g 100 -10 -4.77036 | opp_overlap 4074877 TGGCATCACTAAAAA CGGCAT TGA ATGCCG GTGCCGATGCCGTCT TERM 3969 4075715 - 4075699 - g 74 -10.9 -2.8478 | overlap 4075698 4075701 AGCAGGTTACGAAAG TATGGCG CAA CGCCATA GATACCTATCTCAGA Ssed_3350 4074834 - 4075835 + | peptidase U32 TERM 3970 4076265 - 4076245 - g 87 -5.4 -5.44119 | GCCAGCTTAAAAAAA CTTCATGC TTGGG GCATGCAG CGATTCGTAATGCCC Ssed_3351 4075867 - 4076727 + | peptidase U32 TERM 3971 4076741 - 4076773 + T 79 -11.4 -2.54794 | opp_overlap 4076741, overlap 4076740 4076744 AAGTGCAACGTCAAA CAAGGCTGTAGGGA TTAAC TCCTTATGGCCTTG CTCTTCTCACCTTCC Ssed_3352 4077483 - 4076755 - | hypothetical protein TERM 3972 4079162 - 4079179 + G 73 -5.5 -4.5442 | opp_overlap 4079165 TCTGGCAAGCTCAAT CGAGTCA GATA TGACGCG TTTTGTCATTGCGGC Ssed_3353 4077966 - 4079351 + | nucleoside recognition domain-containing protein TERM 3973 4079388 - 4079404 + F 100 -12.3 -5.94713 | opp_overlap 4079388 ATTAAGTAAAAAAAA GAGTGGC TTT GCCACTC TTTTTTTTATCCCAT TERM 3974 4079404 - 4079388 - f 100 -12.3 -5.96521 | opp_overlap 4079388 ATTAAGTAAAAAAAA GAGTGGC TTT GCCACTC TTTTTTTTATCCCAT TERM 3975 4079505 - 4079492 - f 79 -3.1 -5.39681 | ATAATTAAAGAAAAA CTCAC CGGA ATGAG AATTCACATCTTCAT TERM 3976 4079942 - 4079932 - g 77 -8.2 -4.15222 | opp_overlap 4079932 ATGGCTGGCAACAAA GGCC GAT GGCC TTATTCATTACTCAC TERM 3977 4079932 - 4079942 + G 73 -8.2 -3.83844 | opp_overlap 4079932 ATGGCTGGCAACAAA GGCC GAT GGCC TTATTCATTACTCAC TERM 3978 4080373 - 4080353 - g 93 -7.5 -5.39721 | GGACTAGAGAAAAAA GGGGTAGCA AGA TACTCCCCC CAGCACAAAACTATC Ssed_3354 4079501 - 4083229 + | PAS/PAC sensor signal transduction histidine kinase Ssed_3355 4083328 - 4083732 + | CBS domain-containing protein Ssed_3356 4085192 - 4083762 - | xanthine/uracil/vitamin C permease Ssed_3357 4086002 - 4085535 - | hypothetical protein Ssed_3358 4086215 - 4086385 + | periplasmic nitrate reductase NapE Ssed_3359 4086441 - 4087619 + | trimethylamine-N-oxide reductase C-type cytochrome TorC TERM 3979 4089107 - 4089080 - g 71 -9.2 -3.55761 | gap 1 CATGGAGCCGGGAAA GACTATCGATGCC AAT GGC-TCGAAAGTC ACCTACCCTGACATC Ssed_3360 4087725 - 4090217 + | trimethylamine-N-oxide reductase TorA Ssed_3361 4090214 - 4090861 + | chaperone protein TorD TERM 3980 4090947 - 4090906 - T 82 -8.1 -4.65747 | gap 1, opp_overlap 4090909 4090917 4090929, overlap 4090909 4090917 TAAGTTGTAAGAAAA GAATAGAGAAAGCGCCTGGG TCT CCC-GGCGCTTTTTTTATTT AACCCGAGCTTAGGT TERM 3981 4090944 - 4090909 - T 90 -9.8 -4.43307 | gap 1, opp_overlap 4090909 4090917 4090929, overlap 4090906 4090917 GTTGTAAGAAAAGAA TAGAGAAAGCGCCTGGG TCT CCC-GGCGCTTTTTTTA TTTAACCCGAGCTTA TERM 3982 4090909 - 4090944 + T 100 -14.2 -3.53761 | gap 1, opp_overlap 4090909 4090906 4090917, overlap 4090917 4090929 GTTGTAAGAAAAGAA TAGAGAAAGCGCCTGGG TCT CCC-GGCGCTTTTTTTA TTTAACCCGAGCTTA TERM 3983 4090917 - 4090936 + T 100 -11.4 -5.95539 | gap 1, opp_overlap 4090909 4090906 4090917, overlap 4090909 4090929 AAAAGAATAGAGAAA GCGCCTGGG TCT CCC-GGCGC TTTTTTTATTTAACC TERM 3984 4090936 - 4090917 - T 93 -11.4 -4.31833 | gap 1, opp_overlap 4090917 4090909 4090929, overlap 4090909 4090906 AAAAGAATAGAGAAA GCGCCTGGG TCT CCC-GGCGC TTTTTTTATTTAACC TERM 3985 4090929 - 4090977 + T 79 -8.9 -3.9392 | opp_overlap 4090917 4090909 4090906, overlap 4090917 4090909 AAAGCGCCTGGGTCT CCCGGCGCTTTTTTTATTTAACC CGA GCTTAGGTTAAATGAGTGCCGGG TTATTTAAGCTCCCG Ssed_3362 4091229 - 4090978 - | hypothetical protein TERM 3986 4091766 - 4091794 + G 83 -11.7 -3.53444 | GATGGCGCGGATGGT GTCGGCGGAAGTA CTC TGCCTCTGCCGAC TTTAGAGGGCCATAA Ssed_3363 4091601 - 4093223 + | hypothetical protein TERM 3987 4093329 - 4093309 - T 79 -6.7 -4.5442 | opp_overlap 4093309, overlap 4093304 CGCCTAACGATAAAA TCCTCCTGC TTC GCGGGGGGA TTTTTTTATTTCTCA TERM 3988 4093309 - 4093329 + T 100 -11.1 -6.02919 | opp_overlap 4093304 4093309 CGCCTAACGATAAAA TCCTCCTGC TTC GCGGGGGGA TTTTTTTATTTCTCA Ssed_3364 4094670 - 4093411 - | DEAD/DEAH box helicase domain-containing protein TERM 3989 4094772 - 4094797 + r 83 -12.5 -2.60079 | overlap 4094785 GCTGACGACCGAGAG GTGGAGGGGCG AGTC CGCCCCTCGGC TGAATTATGGCGTAA Ssed_3365 4097831 - 4094802 - | multi-sensor hybrid histidine kinase TERM 3990 4097404 - 4097423 + g 73 -7 -4.14392 | overlap 4097405 CCCTGAGTCGAGAGC TGCCCGGC AACG GCCAGGCG TTTTCCCACTTGCAG Ssed_3366 4097982 - 4099109 + | periplasmic sensory protein associated with the TorRS two-component regulatory system Ssed_3367 4100042 - 4099332 - | DNA-binding transcriptional regulator TorR Ssed_3368 4100284 - 4100655 + | type IV pilus assembly PilZ TERM 3991 4100670 - 4100689 + T 95 -12.2 -4.43272 | ACCCATCAACATCTG CCACCTTC GAAT GAAGGTGG TTTTACATTTTCAGT TERM 3992 4100732 - 4100748 + T 71 -7.3 -3.92996 | overlap 4100729 4100733 TATTGGGTGGATGGT TGAAGGT TTA ACCTTCG TTGTTATCTATCGCC Ssed_3369 4103252 - 4101084 - | hypothetical protein TERM 3993 4103683 - 4103708 + r 71 -6.9 -4.08692 | opp_overlap 4103681, overlap 4103687 4103707 TCGTAGAAAACATCG TGAACTCCACA TGGA TGTGGAGTTAG TTTTCGGGGGGCTTG TERM 3994 4103687 - 4103704 + r 79 -9.9 -3.66908 | opp_overlap 4103681, overlap 4103683 AGAAAACATCGTGAA CTCCACA TGGA TGTGGAG TTAGTTTTCGGGGGG TERM 3995 4103708 - 4103740 + r 77 -10.7 -2.80556 | gap 1, overlap 4103707 ATGGATGTGGAGTTA GTTTTCGG-GGGGC TTGGAT GCCCCATCGAAAAC GTTAGTTATTTTCAA Ssed_3370 4105365 - 4103992 - | DNA repair protein RadA TERM 3996 4106749 - 4106764 + G 81 -3.2 -5.52384 | CTGCTTCACCTTTCA GACTCA AGGT TGCGTC TTTTTTTACTCGGCG TERM 3997 4107401 - 4107424 + G 80 -6.6 -4.66609 | overlap 4107406 GCTGCGGCGATGGGG CATAGCCCCC ATGC GGGGGTTGAG TTTTTAAATAAACTC TERM 3998 4107406 - 4107419 + G 74 -9.5 -3.46102 | overlap 4107401 GGCGATGGGGCATAG CCCCC ATGC GGGGG TTGAGTTTTTAAATA TERM 3999 4107577 - 4107567 - g 73 -2.4 -5.08824 | overlap 4107569 TCTTTATCGAAAAAA CGGC CAA GTCG GCACAGCTTTCAACT Ssed_3371 4105700 - 4108114 + | type IV pilus assembly PilZ TERM 4000 4108153 - 4108136 - T 89 -9.9 -4.18934 | overlap 4108149 GATGATGGTAATAAA TGGAGGT GTAA ACCTCCA TGTAGGAGCGGCTTC Ssed_3372 4109140 - 4108196 - | alpha/beta hydrolase fold TERM 4001 4109307 - 4109339 + r 80 -10.6 -3.37732 | opp_overlap 4109305 4109316, overlap 4109315 AACGCCTAAACAGTG GGCCATAAAGCTGC ACCAA GCAGCCTTATAGCC TTATACCGTTAGTAT TERM 4002 4109330 - 4109316 - R 71 -7.1 -3.86524 | opp_overlap 4109315 4109307, overlap 4109305 ACAGTGGGCCATAAA GCTGC ACCAA GCAGC CTTATAGCCTTATAC Ssed_3373 4110363 - 4109371 - | phosphoserine phosphatase Ssed_3374 4110441 - 4111187 + | membrane protein TERM 4003 4111232 - 4111257 + T 75 -10.5 -2.94126 | opp_overlap 4111237, overlap 4111237 GAACATCAGATAACA AAAAAGGGCTC TGAT GAGCCCTTTTG TATATGGATCTGCTT TERM 4004 4111237 - 4111252 + T 91 -10.4 -4.61868 | opp_overlap 4111237, overlap 4111232 TCAGATAACAAAAAA GGGCTC TGAT GAGCCC TTTTGTATATGGATC TERM 4005 4111252 - 4111237 - T 100 -10.4 -5.60689 | opp_overlap 4111237 4111232 TCAGATAACAAAAAA GGGCTC TGAT GAGCCC TTTTGTATATGGATC Ssed_3375 4112076 - 4111366 - | purine nucleoside phosphorylase TERM 4006 4112220 - 4112190 - R 85 -8.4 -4.33653 | opp_overlap 4112188 4112192, overlap 4112191 4112192 4112194 CACTTAAAAACTAAA GCTAGCGATAAGAT TTT ATCTTATCGCTATT AATCTTTACTTAATA TERM 4007 4112219 - 4112191 - R 83 -11.9 -3.19107 | opp_overlap 4112188 4112192, overlap 4112190 4112192 4112194 ACTTAAAAACTAAAG CTAGCGATAAGAT TTT ATCTTATCGCTAT TAATCTTTACTTAAT TERM 4008 4112192 - 4112218 + r 100 -15.4 -3.50456 | opp_overlap 4112191 4112190 4112192 4112194, overlap 4112188 CTTAAAAACTAAAGC TAGCGATAAGAT TTT ATCTTATCGCTA TTAATCTTTACTTAA TERM 4009 4112218 - 4112192 - R 95 -15.4 -2.5038 | opp_overlap 4112192 4112188, overlap 4112191 4112190 4112194 CTTAAAAACTAAAGC TAGCGATAAGAT TTT ATCTTATCGCTA TTAATCTTTACTTAA TERM 4010 4112216 - 4112194 - R 91 -13.6 -2.7747 | opp_overlap 4112192 4112188, overlap 4112192 4112191 4112190 TAAAAACTAAAGCTA GCGATAAGAT TTT ATCTTATCGC TATTAATCTTTACTT Ssed_3376 4113443 - 4112226 - | phosphopentomutase Ssed_3377 4114788 - 4113457 - | thymidine phosphorylase TERM 4011 4114872 - 4114858 - R 76 -3.6 -5.32699 | overlap 4114859 TGAAACACCAAAAAA CGTAAT TTA ATTACA AAACATATTAACCAA TERM 4012 4114967 - 4114933 - R 79 -5.1 -5.09895 | gap 1, opp_overlap 4114935, overlap 4114935 CACTTACCTAAAAAA GATGGCCCTATTTTCC AATA GTAAAATAGGGC-AAC ACTATTTAGTAACCT TERM 4013 4114966 - 4114935 - R 82 -8.8 -4.17608 | opp_overlap 4114935, overlap 4114933 CTTACCTAAAAAAGA TGGCCCTATTTTCC AATA GTAAAATAGGGCAA CACTATTTAGTAACC Ssed_3378 4115746 - 4114973 - | deoxyribose-phosphate aldolase TERM 4014 4115861 - 4115885 + r 77 -7.9 -4.20749 | opp_overlap 4115867, overlap 4115863 CTTCGGGCGTCGCCT TAGATATCACC ATT GGCGATATCTG TTTATTCAGGTATTC TERM 4015 4115863 - 4115883 + r 73 -8.3 -3.69469 | opp_overlap 4115867, overlap 4115861 TCGGGCGTCGCCTTA GATATCACC ATT GGCGATATC TGTTTATTCAGGTAT TERM 4016 4116168 - 4116140 - R 100 -16.1 -4.37737 | opp_overlap 4116138 4116135, overlap 4116135 4116141 TAAGTAAAAATTAAA TTTAGAGCCGTGC ATT GCACGGCTCTAAC AGATGCTTACTTATC TERM 4017 4116167 - 4116141 - R 100 -19.6 -3.21015 | opp_overlap 4116138 4116135, overlap 4116140 4116135 AAGTAAAAATTAAAT TTAGAGCCGTGC ATT GCACGGCTCTAA CAGATGCTTACTTAT Ssed_3379 4117060 - 4116224 - | nucleoside-specific channel-forming protein, Tsx TERM 4018 4117299 - 4117338 + r 73 -6.6 -4.17089 | opp_overlap 4117305, overlap 4117305 AATTGTGTTTATCCT CACACAGCTAATCATTAA TCTG TTAAAGATTAGCTATATG TTTTACAAATTTAAA TERM 4019 4117378 - 4117404 + r 76 -10.9 -2.70932 | opp_overlap 4117379 TGGCTGTGTTAACTT AGACTCTGCTC TGTTT GAGCAGAGTCA TAGTTCAGGGGCACC TERM 4020 4117403 - 4117379 - R 93 -14.4 -2.52464 | opp_overlap 4117378 GGCTGTGTTAACTTA GACTCTGCTC TGTTT GAGCAGAGTC ATAGTTCAGGGGCAC TERM 4021 4117408 - 4117427 + r 75 -10 -3.09234 | TGAGCAGAGTCATAG TTCAGGGG CACC CCCCTGGA TTACCTAACGTTTAT Ssed_3380 4118712 - 4117453 - | nucleoside transporter Ssed_3381 4119726 - 4118890 - | TatD-related deoxyribonuclease TERM 4022 4119081 - 4119091 + g 75 -5.4 -4.66833 | AATCTAAAGAAATGC TTGC AAT GCAA TTTTTAAGCTTCAAG TERM 4023 4119492 - 4119506 + g 70 -10 -3.22491 | opp_overlap 4119492 4119491 TCCCCAGCGCATAAG GGCAGT TAA ACTGCC TTGCTACTGCGATTT TERM 4024 4119995 - 4119976 - R 100 -7.8 -5.66684 | opp_overlap 4119976 4119975 TAAGGTATAAAAAAA CCCCAAAC TTTC GTATGGGG CTTTAACAAGACTAA Ssed_3382 4121646 - 4120066 - | peptide chain release factor 3 TERM 4025 4121909 - 4121881 - R 70 -9.7 -2.71681 | opp_overlap 4121880 4121881 GAATGGTCTGAATGA CCATGCAACCT GAATAAA AGATTGCATGG CTTTATTGCACTATA Ssed_3383 4122841 - 4121933 - | lipoprotein NlpI TERM 4026 4122980 - 4122963 - R 93 -9.1 -5.28176 | opp_overlap 4122963 TTCAGGCATAAAAAA GGAGACC CTAA GGTCCCC TTTCATATTCAACAT TERM 4027 4123020 - 4123036 + r 72 -8.7 -3.53761 | overlap 4123015 4123023 AGATAGGTTTACTCG GCTGGAG CTG CTTCAGC TTTAGGCGCAGCTTC Ssed_3384 4125127 - 4123013 - | polynucleotide phosphorylase/polyadenylase TERM 4028 4125383 - 4125394 + G 76 -2.2 -5.18726 | TTTCCGCACTATTCT TTGC GATT GCGA TTTTTATTGTCGAAA Ssed_3385 4125316 - 4127349 + | diguanylate cyclase/phosphodiesterase TERM 4029 4127773 - 4127788 + T 86 -10.4 -4.0641 | opp_overlap 4127773 ACAGGCAATAAAAAA GGAGGC CTAA GCCTCC TTTATCTAAATCCAG TERM 4030 4127788 - 4127773 - T 100 -10.4 -5.49234 | opp_overlap 4127773 ACAGGCAATAAAAAA GGAGGC CTAA GCCTCC TTTATCTAAATCCAG Ssed_3386 4128079 - 4127810 - | 30S ribosomal protein S15 Ssed_3387 4129196 - 4128231 - | tRNA pseudouridine synthase B Ssed_3388 4129627 - 4129196 - | ribosome-binding factor A TERM 4031 4129705 - 4129688 - R 100 -14.1 -5.30616 | CTATCTAAATAAAAA GGGCGGC TAAC GCCGCCC CCTTAACGCTTTACT Ssed_3389 4132406 - 4129716 - | translation initiation factor IF-2 TERM 4032 4132285 - 4132307 + g 70 -7.6 -3.93864 | overlap 4132286 AGCAATTGTTGCTTT TCTGACTCGG AAA CCGTGTCAGC TTTAGATTTCTTAAT TERM 4033 4132286 - 4132306 + g 74 -11.1 -2.95234 | overlap 4132285 GCAATTGTTGCTTTT CTGACTCGG AAA CCGTGTCAG CTTTAGATTTCTTAA Ssed_3390 4133932 - 4132433 - | transcription elongation factor NusA Ssed_3391 4134479 - 4133961 - | hypothetical protein TERM 4034 4134455 - 4134441 - G 100 -4.9 -5.93252 | CCGAAAAACAAAAAA GGGAC ATATA GCCCC AGTATAACGCCGTAA TERM 4035 4134520 - 4134505 - R 100 -6.8 -5.60689 | opp_overlap 4134505 CCAGATAACAAAAAA CCCCGT AATA ACGAGG TCGTTGAGTTTAGAA TERM 4036 4134932 - 4134913 - R 78 -7.2 -4.3898 | ACGACCTTGATAAAA GGAACTAA TTAT TTAGTCCC TACCAACTTCCAGAG Ssed_3392 4135303 - 4134956 - | preprotein translocase subunit SecG Ssed_3393 4136087 - 4135305 - | Triose-phosphate isomerase Ssed_3394 4137628 - 4136297 - | phosphoglucosamine mutase TERM 4037 4136624 - 4136599 - G 93 -11.9 -4.43681 | overlap 4136613 CAGCTAATACCAAAA TACCGGCAACG ATAC CATCGCCGGTA GTGCCATGGTCCAGA TERM 4038 4136968 - 4136993 + g 78 -11.3 -3.36273 | gap 1, opp_overlap 4136976 TTTCACGGATTTTCC CCATAGAAGTGG CAC CCACTTC-ATGG TTGATATTCAGACCA TERM 4039 4137676 - 4137647 - R 72 -10.1 -2.51738 | overlap 4137646 4137649 AATAACCCCATCAAG TATTCCGGATTCA AAGC CGAAACCGGAATA TGAAAATAATAATAT TERM 4040 4137872 - 4137888 + r 80 -2.1 -5.53991 | opp_overlap 4137872, overlap 4137874 TCAGATGCGCTAAAA CTCGCCT TTC AGGAGTG TTTTTTTGCTGCCTA Ssed_3395 4138908 - 4138066 - | dihydropteroate synthase TERM 4041 4139001 - 4139023 + r 86 -12.1 -3.35992 | opp_overlap 4139001 4139006, overlap 4139006 AGATCCCGAAAACAA GAAAACCCC ATGAC GGGGTTTTC TTCATTCAACTAAAT TERM 4042 4139023 - 4139001 - R 100 -12.8 -4.18908 | opp_overlap 4139001 4139006, overlap 4139006 AGATCCCGAAAACAA GAAAACCCCA TGA CGGGGTTTTC TTCATTCAACTAAAT TERM 4043 4139018 - 4139006 - R 85 -6.9 -5.093 | opp_overlap 4139001 4139006, overlap 4139001 CCGAAAACAAGAAAA CCCCA TGA CGGGG TTTTCTTCATTCAAC TERM 4044 4139006 - 4139018 + r 80 -6.2 -4.78572 | opp_overlap 4139006 4139001, overlap 4139001 CCGAAAACAAGAAAA CCCC ATGAC GGGG TTTTCTTCATTCAAC Ssed_3396 4141023 - 4139044 - | microtubule-severing ATPase Ssed_3397 4141698 - 4141069 - | 23S rRNA methyltransferase J TERM 4045 4141601 - 4141591 - G 71 -8.2 -3.66178 | opp_overlap 4141595 TTCTTCAATTTTAAA CGCG GCT CGCG AACGAAATCCCCGTT TERM 4046 4141660 - 4141683 + g 73 -2.4 -5.09225 | gap 1, overlap 4141665 4141670 AAAATGTTCCTGCAT CCAAC-GTGAG GAA CTCGCTGTTCG TTTTTTACCTGACAT Ssed_3398 4141790 - 4142089 + | hypothetical protein TERM 4047 4142142 - 4142112 - T 70 -8.5 -3.28003 | opp_overlap 4142112 4142118, overlap 4142141 TGAACACAGTACCAA GATTAATGCAG GGTGTTCAT CTGCATTAATC TGACTTGTAAAAGTC TERM 4048 4142142 - 4142159 + T 70 -8.5 -3.32627 | opp_overlap 4142141 TTCATCTGCATTAAT CTGACTT GTAA AAGTCAG TCTTACTCTTTCTCT TERM 4049 4142260 - 4142224 - T 100 -19.7 -3.30918 | opp_overlap 4142229, overlap 4142229 AGTCAGAGTAGAAGA TAAAATGGAGCCACTGA GAT TCAGTGGCTCCATTTTT TTATCTGTAGCAATT TERM 4050 4142255 - 4142229 - T 100 -19.6 -4.75289 | opp_overlap 4142229, overlap 4142224 GAGTAGAAGATAAAA TGGAGCCACTGA GAT TCAGTGGCTCCA TTTTTTTATCTGTAG TERM 4051 4142229 - 4142255 + T 100 -19.6 -5.76633 | opp_overlap 4142229 4142224 GAGTAGAAGATAAAA TGGAGCCACTGA GAT TCAGTGGCTCCA TTTTTTTATCTGTAG Ssed_3399 4143228 - 4142302 - | protein-export membrane protein SecF Ssed_3400 4145044 - 4143230 - | preprotein translocase subunit SecD TERM 4052 4143627 - 4143613 - G 71 -2.8 -4.88918 | GCAGGCCAAATAAAA TCACCA TAT TGGCAA TCAGAGCCACATTGG Ssed_3401 4145754 - 4145194 - | hypothetical protein TERM 4053 4145831 - 4145801 - R 82 -12.1 -2.98719 | opp_overlap 4145809, overlap 4145809 GCAGTAGAGCAGATA CAAAAAAACCGCT ACATA AGCGGTTTTTTTA ACAACATTTTAAGGA TERM 4054 4145823 - 4145809 - R 100 -7.1 -5.76633 | opp_overlap 4145809, overlap 4145801 GCAGATACAAAAAAA CCGCT ACATA AGCGG TTTTTTTAACAACAT TERM 4055 4145809 - 4145823 + r 93 -7.1 -5.40474 | opp_overlap 4145809 4145801 GCAGATACAAAAAAA CCGCT ACATA AGCGG TTTTTTTAACAACAT Ssed_3402 4146308 - 4145847 - | transcription elongation factor GreA TERM 4056 4146688 - 4146713 + r 81 -11.9 -2.72558 | opp_overlap 4146693, overlap 4146693 TTAAAAACAGGTACA AAAAAGGCCGC AAAT GCGGCCTTTTG TAATTAAGCAATTAT TERM 4057 4146693 - 4146708 + r 95 -11.8 -4.5442 | opp_overlap 4146693, overlap 4146688 AACAGGTACAAAAAA GGCCGC AAAT GCGGCC TTTTGTAATTAAGCA TERM 4058 4146708 - 4146693 - R 100 -11.8 -5.30686 | opp_overlap 4146693 4146688 AACAGGTACAAAAAA GGCCGC AAAT GCGGCC TTTTGTAATTAAGCA Ssed_3403 4149949 - 4146731 - | carbamoyl phosphate synthase large subunit Ssed_3404 4151127 - 4149970 - | carbamoyl phosphate synthase small subunit TERM 4059 4151277 - 4151291 + r 79 -5.6 -4.89009 | opp_overlap 4151277 ATTTGCATAAAAAAA CCGCCA TAT TGACGG TTTTTCATTGACTCT TERM 4060 4151291 - 4151277 - R 100 -7.8 -5.61596 | opp_overlap 4151277 ATTTGCATAAAAAAA CCGCCA TAT TGACGG TTTTTCATTGACTCT Ssed_3405 4152120 - 4151305 - | dihydrodipicolinate reductase TERM 4061 4152204 - 4152223 + r 95 -12.2 -4.19238 | opp_overlap 4152204 TTAATTCAAAAAAAA GCCTAAGC ATTG GCTTAGGC TTTTAGAATTACAGA TERM 4062 4152223 - 4152204 - R 100 -12.2 -5.86332 | opp_overlap 4152204 TTAATTCAAAAAAAA GCCTAAGC ATTG GCTTAGGC TTTTAGAATTACAGA Ssed_3406 4152849 - 4152232 - | peptidylprolyl isomerase, FKBP-type Ssed_3407 4153732 - 4152932 - | peptidase M48, Ste24p TERM 4063 4153989 - 4153973 - R 100 -13.7 -5.36441 | opp_overlap 4153973 TCCGTATACAAAAAA GCCCTGC ATA GCAGGGC TTTGACAACTTAATT TERM 4064 4153973 - 4153989 + r 95 -13.7 -3.58305 | opp_overlap 4153973 TCCGTATACAAAAAA GCCCTGC ATA GCAGGGC TTTGACAACTTAATT Ssed_3408 4155173 - 4154037 - | chaperone protein DnaJ TERM 4065 4154808 - 4154776 - G 76 -9.9 -3.64822 | opp_overlap 4154776 AGCTCTTTAGTTAAA CCTTTAACCGCCTCT TCG AGAGACAGCTCAAGG TTATAACGCAAGTCG TERM 4066 4155272 - 4155243 - R 100 -15.9 -3.98804 | gap 1 CTAAACTTGAAACAA CGGGCGTTA-GAGT AAA ACTCATAACGCCCG CATAAAATAATTTAG Ssed_3409 4157223 - 4155301 - | 2-alkenal reductase TERM 4067 4156404 - 4156415 + g 74 -3 -5.07011 | overlap 4156399 CAGTTTGTGATGCGC TTGA AAGC TCAA TTTTTGCTTTCTCTG Ssed_3410 4157570 - 4158493 + | hypothetical protein TERM 4068 4158511 - 4158539 + T 74 -9 -3.45849 | opp_overlap 4158511 4158517 4158518, overlap 4158518 AAGCTCTGAATCCAA TAAGAAGCCCAC ATTGC GTGGGTTTTTTA TTCTCATGATATAAC TERM 4069 4158518 - 4158532 + T 100 -7.1 -5.58179 | opp_overlap 4158517 4158511 4158518, overlap 4158511 GAATCCAATAAGAAG CCCAC ATTGC GTGGG TTTTTTATTCTCATG Ssed_3411 4159228 - 4158563 - | hypothetical protein TERM 4070 4159600 - 4159569 - R 75 -10 -3.09193 | AGTACATCCATGTAA GCTCGACGGTGGCA TCCA TGCCACCGACGTCC TCAGCCGCACCTACA TERM 4071 4159694 - 4159717 + r 93 -12.5 -3.91144 | opp_overlap 4159694 CTTCAAATATAAAAA TGCCGCACT CTGGTT AGTGCGGCA TTTATCAAATATCAA TERM 4072 4159717 - 4159694 - R 100 -12.5 -5.19879 | opp_overlap 4159694 CTTCAAATATAAAAA TGCCGCACT CTGGTT AGTGCGGCA TTTATCAAATATCAA Ssed_3412 4161840 - 4159768 - | peptidase S9 prolyl oligopeptidase Ssed_3413 4162351 - 4162665 + | hypothetical protein Ssed_3414 4163555 - 4162737 - | Beta-lactamase TERM 4073 4163599 - 4163578 - R 88 -8 -5.1356 | overlap 4163579 CCTTATTAACAAAAA CTGCCCTG AATATA CAGGGCAA TGGTGGCGAGCGATT TERM 4074 4163598 - 4163579 - R 76 -9.3 -3.67413 | overlap 4163578 CTTATTAACAAAAAC TGCCCTG AATATA CAGGGCA ATGGTGGCGAGCGAT Ssed_3415 4164887 - 4163613 - | gamma-glutamyl phosphate reductase TERM 4075 4164656 - 4164638 - G 88 -13.2 -3.25223 | TATCTATATCACCAA TCACGCCT TGC AGGCGTGA CTCATCGAGCAGTAA TERM 4076 4164930 - 4164912 - R 72 -8.8 -3.55444 | CCTTCATTTTTCAAA GGACCTGA ATG TCAGGACC TGTAAACTTCAATTC Ssed_3416 4166063 - 4164945 - | gamma-glutamyl kinase TERM 4077 4166201 - 4166183 - R 100 -13.2 -5.60993 | TTTCCCATAAAAAAA GGCCATAC ACT GTATGGCC TCATCAATAACTAAC Ssed_3417 4167511 - 4166222 - | xanthine/uracil/vitamin C permease TERM 4078 4166495 - 4166468 - G 71 -6.3 -4.22214 | AGCCACGTAAAACAA GGTTCCCGC GGTAGCGTAG GCAGGAACC ATTCCCGCAAGTGGC TERM 4079 4167512 - 4167524 + r 93 -7.7 -5.49579 | opp_overlap 4167511 TAATTTTTCTAACAT GGAAC TGC GTTCC TTTTATTTTTTATAG TERM 4080 4167701 - 4167716 + r 70 -3.3 -4.98255 | ATAGAAATGAGGATC TCTGA CAAGAA TCAGA TTTTTATACTTAAAC TERM 4081 4167764 - 4167746 - R 100 -16 -5.74122 | opp_overlap 4167741 CAGCAGACAAAAAAA GCCCGCTC AGT GAGCGGGC CGATACTAATTTTTA Ssed_3418 4167965 - 4167867 - | hypothetical protein TERM 4082 4168494 - 4168476 - R 100 -16 -6.32017 | AATAAACAAAAAAAA GCCCGCTC AAA GAGCGGGC CGAGACTAAATCAAG TERM 4083 4169154 - 4169136 - R 100 -16 -6.0427 | AGCAGACAAAAAAAA GCCCGCTC AAA GAGCGGGC AAAGACTAATTTCAA Ssed_3419 4169426 - 4169328 - | hypothetical protein TERM 4084 4169863 - 4169820 - R 74 -9 -3.56821 | gap 1, opp_overlap 4169820 4169826 4169827 4169855, overlap 4169823 ATCATACTTTGCAAA CTAGTCA-CTGCAAGTGACAC GTT GTGTCACTTGCAGCTTAATGG AGCTTTATCCTCTGG TERM 4085 4169826 - 4169856 + r 100 -17 -3.17982 | opp_overlap 4169823 4169820, overlap 4169820 4169827 4169855 CTTTGCAAACTAGTC ACTGCAAGTGACAC GTT GTGTCACTTGCAGC TTAATGGAGCTTTAT TERM 4086 4169827 - 4169855 + r 100 -20.5 -2.50307 | opp_overlap 4169823 4169820, overlap 4169820 4169826 TTTGCAAACTAGTCA CTGCAAGTGACAC GTT GTGTCACTTGCAG CTTAATGGAGCTTTA Ssed_3420 4171403 - 4169868 - | peptidase M17, leucyl aminopeptidase domain-containing protein Ssed_3421 4171733 - 4173193 + | Xaa-His dipeptidase TERM 4087 4173195 - 4173234 + T 100 -14.4 -3.61398 | opp_overlap 4173189, overlap 4173199 4173200 CAGAGAAAGGTTAAG TTTATCAGGCCCTAGGTT CCAG AACCTAGGGCCTGGTTAC TTCTTAAAACCCAAG TERM 4088 4173199 - 4173230 + T 100 -19.6 -3.53444 | opp_overlap 4173189, overlap 4173195 4173200 GAAAGGTTAAGTTTA TCAGGCCCTAGGTT CCAG AACCTAGGGCCTGG TTACTTCTTAAAACC TERM 4089 4173200 - 4173229 + T 100 -20.9 -2.71745 | opp_overlap 4173189, overlap 4173199 4173195 AAAGGTTAAGTTTAT CAGGCCCTAGGTT CCAG AACCTAGGGCCTG GTTACTTCTTAAAAC Ssed_3422 4174320 - 4173238 - | DNA polymerase IV Ssed_3423 4175482 - 4174505 - | GGDEF domain-containing protein TERM 4090 4175596 - 4175565 - R 73 -2.4 -5.24129 | gap 1, opp_overlap 4175565 4175569 TTCGGGCATAAAAAA GCACCTTTTACTA GAAGTGT TAGTTA-AGGTGC TCAATTATGGTGAAT Ssed_3424 4175842 - 4175621 - | hypothetical protein Ssed_3425 4176918 - 4175902 - | ApbE family lipoprotein TERM 4091 4176896 - 4176874 - G 100 -7.7 -5.63517 | GGCTGAAACAAAAAA GGCTAGCCC AATAA GAGCTAACC AGTTTACTAAGGTCT TERM 4092 4177078 - 4177091 + r 76 -6.7 -4.4261 | ATTAGCCACCGAAGT CATCC AGCA GGATG TTTTCATCTTCGACA Ssed_3426 4178311 - 4177064 - | Na(+)-translocating NADH-quinone reductase subunit F Ssed_3427 4178965 - 4178357 - | Na(+)-translocating NADH-quinone reductase subunit E Ssed_3428 4179603 - 4178971 - | Na(+)-translocating NADH-quinone reductase subunit D Ssed_3429 4180397 - 4179603 - | Na(+)-translocating NADH-quinone reductase subunit C Ssed_3430 4181589 - 4180390 - | Na(+)-translocating NADH-quinone reductase subunit B Ssed_3431 4182923 - 4181589 - | Na(+)-translocating NADH-quinone reductase subunit A TERM 4093 4183094 - 4183078 - R 70 -8.7 -3.38224 | overlap 4183076 ATTTTACCGCAAATA TCACGGC ATC GCCATGA AAAATGTGAGTGTTT TERM 4094 4183374 - 4183362 - R 77 -6.3 -4.614 | opp_overlap 4183361 CTTAAGCACATAAAA TAGGT CTA ACCTA CTAATCTCATGATTT TERM 4095 4183419 - 4183455 + r 100 -14.7 -3.80745 | opp_overlap 4183410 4183431, overlap 4183421 4183423 4183431 TTCAAACAGAATTTC TGTATAAAAAAAGCGGC AAA GCCGCTTTTTTTATCTA TTTAGGTATTATCTT TERM 4096 4183421 - 4183453 + r 100 -15.1 -3.47542 | opp_overlap 4183431, overlap 4183419 4183423 4183431 CAAACAGAATTTCTG TATAAAAAAAGCGGC AAA GCCGCTTTTTTTATC TATTTAGGTATTATC TERM 4097 4183423 - 4183451 + r 100 -17.7 -3.29937 | opp_overlap 4183431, overlap 4183421 4183419 4183431 AACAGAATTTCTGTA TAAAAAAAGCGGC AAA GCCGCTTTTTTTA TCTATTTAGGTATTA TERM 4098 4183443 - 4183431 - R 100 -10.5 -5.60993 | opp_overlap 4183423 4183421 4183419 4183431 TTCTGTATAAAAAAA GCGGC AAA GCCGC TTTTTTTATCTATTT TERM 4099 4183431 - 4183443 + r 100 -10.5 -5.82281 | opp_overlap 4183431, overlap 4183423 4183421 4183419 TTCTGTATAAAAAAA GCGGC AAA GCCGC TTTTTTTATCTATTT Ssed_3432 4183982 - 4183473 - | S-ribosylhomocysteinase TERM 4100 4183735 - 4183725 - G 71 -4.6 -4.56358 | CAGACTCATATAAAA GCCG GTA CGAC AGCCCATTGGGGAGA TERM 4101 4184322 - 4184348 + r 80 -10.1 -3.68569 | opp_overlap 4184323, overlap 4184323 ATCCAAAAATAGAAA AGGCCATGGCG ATAAA CGCTATGGCCC TTGTTACATCAGTAC TERM 4102 4184323 - 4184347 + r 91 -13.6 -2.8082 | opp_overlap 4184323, overlap 4184322 TCCAAAAATAGAAAA GGCCATGGCG ATAAA CGCTATGGCC CTTGTTACATCAGTA TERM 4103 4184347 - 4184323 - R 95 -11.4 -4.98672 | opp_overlap 4184323 4184322 TCCAAAAATAGAAAA GGCCATGGCG ATAAA CGCTATGGCC CTTGTTACATCAGTA Ssed_3433 4184683 - 4184384 - | BolA family protein Ssed_3434 4185398 - 4184895 - | glycine cleavage system regulatory protein-like protein TERM 4104 4185193 - 4185183 - G 73 -2.4 -5.06816 | ATCGTCGAAGAAAAA GCGC AGC GCGG TAAACTCTGACTCAA Ssed_3435 4186240 - 4185545 - | 2OG-Fe(II) oxygenase Ssed_3436 4186304 - 4187542 + | rRNA (guanine-N(2)-)-methyltransferase TERM 4105 4187615 - 4187578 - T 77 -6.4 -4.55849 | overlap 4187581 4187584 GAAAAGTTAAAGAAA CAACAAGGCAGGAAG-GT AGTT ACTCCTCCTGCC-TGCCG TCACTAAAGTAGCCA TERM 4106 4187612 - 4187581 - T 76 -6.7 -4.35189 | overlap 4187578 4187584 AAGTTAAAGAAACAA CAAGGCAGGAAG-GT AGTT ACTCCTCCTGCC-TG CCGTCACTAAAGTAG TERM 4107 4187610 - 4187584 - T 89 -9.5 -4.26693 | gap 1, overlap 4187581 4187578 TTAAAGAAACAACAA GGCAGGAAG-GT AGTT ACTCCTCCTGCC TGCCGTCACTAAAGT Ssed_3437 4188272 - 4187709 - | OmpA-like transmembrane domain-containing protein Ssed_3438 4189654 - 4188587 - | hypothetical protein Ssed_3439 4189904 - 4190470 + | uncharacterized lipoprotein Ssed_3440 4190528 - 4191112 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type Ssed_3441 4191197 - 4191523 + | hypothetical protein TERM 4108 4191590 - 4191611 + F 100 -10.9 -5.98675 | opp_overlap 4191590 TTTACGGCAGTAAAA GCTCAGACA AACT TGTCTGGGC TTTTTTATTTTTATC TERM 4109 4191611 - 4191590 - f 82 -8.7 -4.26903 | opp_overlap 4191590 TTTACGGCAGTAAAA GCTCAGACA AACT TGTCTGGGC TTTTTTATTTTTATC Ssed_3442 4191685 - 4193121 + | major facilitator transporter TERM 4110 4193153 - 4193169 + T 90 -12.3 -3.66178 | opp_overlap 4193153 CTATAAAACAAAAAA GCCCTCA TAA TGAGGGC TTTAACGTTACAGGC TERM 4111 4193169 - 4193153 - T 100 -12.3 -5.86976 | opp_overlap 4193153 CTATAAAACAAAAAA GCCCTCA TAA TGAGGGC TTTAACGTTACAGGC Ssed_3443 4193683 - 4193198 - | nucleotide-binding protein TERM 4112 4193800 - 4193818 + G 88 -7.4 -5.00895 | opp_overlap 4193809 TATGGATGATATTCT TGGTGACA ATC TGCCACCA TTTTTCTATGATGGC TERM 4113 4193916 - 4193927 + G 70 -2.2 -5.00616 | overlap 4193906 TAGCCCTGATAGTCA TCAG TTAC CTGG TTTTTTCCAGGCCCA Ssed_3444 4193786 - 4194226 + | VanZ family protein Ssed_3445 4194258 - 4195190 + | 2-dehydropantoate 2-reductase Ssed_3446 4195405 - 4196892 + | putative sodium-dependent transporter Ssed_3447 4197198 - 4197854 + | phosphoesterase, PA-phosphatase related Ssed_3448 4198793 - 4197921 - | hypothetical protein TERM 4114 4198912 - 4198930 + r 91 -11.7 -3.8766 | opp_overlap 4198909 4198908 TCAAAGTAATAGTGA GCCCCGA ACAAG TCGGGGC TTTAATCTGATATCG Ssed_3449 4200517 - 4198979 - | transporter TERM 4115 4199101 - 4199076 - G 71 -4.7 -4.56802 | AAACAAAGACTAAAA GGTAACATCAT TGAG ATGAGGGTACC TATACCGATATCTTT TERM 4116 4200602 - 4200572 - R 72 -4.6 -4.83169 | overlap 4200573 ACTTTTCGACAAAAA GCGGGCGCAACATT TTT AATGTCGCGGCAGG ATACAGATGCACTCT TERM 4117 4200675 - 4200656 - R 100 -15 -5.61689 | opp_overlap 4200656 AAAAGCAACAAAAAA GCCCCGGT ATAA ACCGGGGC TTTGAAAATAGAGCA TERM 4118 4200656 - 4200675 + r 100 -15 -3.57144 | opp_overlap 4200656 AAAAGCAACAAAAAA GCCCCGGT ATAA ACCGGGGC TTTGAAAATAGAGCA Ssed_3450 4201549 - 4200701 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 4119 4201588 - 4201570 - R 77 -10.2 -3.34398 | overlap 4201568 CTTCTCTCTTAAAGA GCCGAGGC GAT GCATCGGC ATGAATCAATTTGAT Ssed_3451 4202957 - 4201704 - | hypothetical protein TERM 4120 4201845 - 4201815 - G 72 -10.4 -3.07307 | TAAAGCCGGATGGAA TGCCGCAGCGAC TACCGGC GCCGATGCGGCA CCACCTACGTTGGCC Ssed_3452 4204091 - 4203303 - | hypothetical protein Ssed_3453 4204486 - 4204091 - | invasion gene expression up-regulator, SirB Ssed_3454 4205630 - 4204635 - | LysR family transcriptional regulator Ssed_3455 4205676 - 4206131 + | GCN5-related N-acetyltransferase Ssed_3456 4207315 - 4206128 - | flagellar biosynthesis protein, putative TERM 4121 4206867 - 4206893 + g 73 -10.2 -3.2614 | overlap 4206870 CACTGTGGCACGGGC CTGGACAGAACA TCC TGTTCTGTCTCG TTGCTCTCAAAGATA TERM 4122 4206870 - 4206890 + g 81 -12.7 -2.81547 | overlap 4206867 TGTGGCACGGGCCTG GACAGAACA TCC TGTTCTGTC TCGTTGCTCTCAAAG Ssed_3457 4208092 - 4207715 - | hypothetical protein TERM 4123 4209090 - 4209062 - R 100 -16.2 -5.38054 | opp_overlap 4209057 4209056 TGCGACAAACAAAAA CGCCATTGGTAT AAGAA ATACCAATGGCG TTCGAATTCATTCAG Ssed_3458 4210022 - 4209180 - | HemK family modification methylase Ssed_3459 4211163 - 4210078 - | peptide chain release factor 1 Ssed_3460 4212457 - 4211177 - | glutamyl-tRNA reductase TERM 4124 4211966 - 4211953 - G 81 -9.5 -4.12901 | opp_overlap 4211947 4211953, overlap 4211947 4211943 CAAAAGCGACAGAAA CGGCG GCAG CGCCG ATCTCTGTTTCAGTT TERM 4125 4213306 - 4213282 - g 74 -10.7 -2.82466 | opp_overlap 4213279, overlap 4213279 4213277 TAAAAATACAGATCA GCCACTGGCAA GCC TTGTCAGCGGC CCACTTATTGCCTTC Ssed_3461 4212699 - 4213355 + | outer membrane lipoprotein LolB TERM 4126 4213648 - 4213633 - g 72 -10.4 -3.00946 | opp_overlap 4213632 4213630 4213633, overlap 4213630 TGGCTTGATAAACGA CTCCCC ATGG GGGGAG GTATTGGTGGTGGTT Ssed_3462 4213345 - 4214199 + | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase TERM 4127 4214611 - 4214622 + G 81 -5.8 -4.9792 | opp_overlap 4214611 CCTATTACCGCTAAA GTCG TTGC CGAC TTTTTGTCTAGCGTA Ssed_3463 4214278 - 4215225 + | ribose-phosphate pyrophosphokinase TERM 4128 4215249 - 4215266 + T 100 -9.9 -6.06723 | opp_overlap 4215249 ATATATCTAGAAAAA TGCACTC AGAT GAGTGCA TTTTTTTTTGCCAGC TERM 4129 4215266 - 4215249 - T 93 -9.9 -4.90455 | opp_overlap 4215249 ATATATCTAGAAAAA TGCACTC AGAT GAGTGCA TTTTTTTTTGCCAGC Ssed_3464 4215662 - 4215330 - | thioredoxin Ssed_3465 4217083 - 4215776 - | DNA-binding winged-HTH domain-containing protein TERM 4130 4215870 - 4215882 + g 73 -7.7 -4.00348 | TCCTGATAAATCTGC CTCAG GAT CTGAG TTTCATTGCTTAGCA TERM 4131 4216527 - 4216540 + g 80 -6.7 -4.77757 | GGCTGATCCTCTAAC CTGAG TTGA CTCAG TTTTACTTTTTGCCC TERM 4132 4216686 - 4216676 - G 81 -3.2 -5.49569 | overlap 4216678 GAGGAACACAAAAAA CAGC ACG ACTG CGAGCCAACGCCAAT TERM 4133 4217260 - 4217237 - R 100 -14.6 -5.1675 | GCACTCAGCAAAAAA GACCCTGGTC AAAA GACCAGGGCC AAGATGGGATTGCAG Ssed_3466 4219645 - 4217288 - | hypothetical protein TERM 4134 4219229 - 4219217 - G 70 -7.7 -3.83205 | opp_overlap 4219212 4219208 ATCGTTGATAGTAAA TGCTG GCT CAGCA GTCACATCTTTAAGG TERM 4135 4220673 - 4220656 - R 100 -12.7 -5.4251 | opp_overlap 4220656 TCCAGACACAAAAAA GCCCGTC ATAA GACGGGC TTTCTGTGTATGGCT TERM 4136 4220656 - 4220673 + r 100 -12.7 -4.17698 | opp_overlap 4220656 TCCAGACACAAAAAA GCCCGTC ATAA GACGGGC TTTCTGTGTATGGCT TERM 4137 4221309 - 4221325 + r 70 -9.5 -2.62396 | overlap 4221311 TTGAACCTGCGACCC CAGCATT ATG AATGCTG TGCTCTAACCAGCTG TERM 4138 4221734 - 4221750 + r 70 -9.5 -2.62396 | overlap 4221736 TTGAACCTGCGACCC CAGCATT ATG AATGCTG TGCTCTAACCAGCTG TERM 4139 4222411 - 4222434 + r 93 -14 -3.19192 | opp_overlap 4222405 4222411 GCTTGAAAACAAAAA TGGCCCAATT TTGC AATTGGGCCA TTCAATTAACTCACG TERM 4140 4222434 - 4222411 - R 100 -14 -5.45802 | opp_overlap 4222411, overlap 4222405 GCTTGAAAACAAAAA TGGCCCAATT TTGC AATTGGGCCA TTCAATTAACTCACG Ssed_3467 4223583 - 4222492 - | translation-associated GTPase TERM 4141 4223629 - 4223611 - R 73 -7.4 -3.96696 | opp_overlap 4223611, overlap 4223612 4223614 AATATCAATAGTAAA CCAGCAGT GTC ACTGCCGA TTAAGTTCTTATAAG Ssed_3468 4224345 - 4223761 - | peptidyl-tRNA hydrolase Ssed_3469 4225858 - 4224650 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 4142 4224850 - 4224867 + g 75 -5.5 -4.72201 | overlap 4224851 ATGCCGGTTCTTCCC ACCAAGG TTCG CCTTGGC TTATTTTTTCTGAAA TERM 4143 4225799 - 4225810 + g 83 -4.4 -5.4477 | CATCCCTCCACCAAC GATG ACAA CATC TTTTTTTACAGCTTT Ssed_3470 4226158 - 4226475 + | hypothetical protein TERM 4144 4226808 - 4226789 - g 95 -3.5 -5.96894 | opp_overlap 4226789 4226790, overlap 4226790 ACTGAAAGAAAAAAA TCCCGAT TTAATC ATCGGGG TTGGTGGATGTGTTG TERM 4145 4226807 - 4226790 - g 73 -7 -4.15696 | opp_overlap 4226789 4226790, overlap 4226789 CTGAAAGAAAAAAAT CCCGAT TTAATC ATCGGG GTTGGTGGATGTGTT Ssed_3471 4226571 - 4227995 + | 2-alkenal reductase TERM 4146 4228036 - 4228017 - f 88 -11.4 -3.74361 | opp_overlap 4228017 GATATTGATTAAGAA GGCGGCAC TATA ATGCCGCC TTTTTTTGCTTTCAT TERM 4147 4228017 - 4228036 + F 100 -10.7 -5.73563 | opp_overlap 4228017 GATATTGATTAAGAA GGCGGCA CTATAA TGCCGCC TTTTTTTGCTTTCAT Ssed_3472 4228165 - 4229208 + | PhoH family protein Ssed_3473 4229198 - 4229674 + | putative metalloprotease Ssed_3474 4229701 - 4230576 + | CBS domain-containing protein Ssed_3475 4230617 - 4232176 + | apolipoprotein N-acyltransferase TERM 4148 4232214 - 4232240 + F 100 -18.2 -3.92373 | opp_overlap 4232201 ACGTTCACTCGTAGT TGTGGCTGGTTA ACA TAACCAGCCACA TTTGTAAGTAAAATG TERM 4149 4232666 - 4232676 + G 91 -3.2 -5.74684 | GCCTATCATCTTCTT TGGC GGT GCTA TTTTTGTTTTTGTTG Ssed_3476 4232424 - 4233320 + | diguanylate cyclase TERM 4150 4233457 - 4233428 - T 100 -9.3 -6.23545 | opp_overlap 4233428 CGCAAACAAAAAAAA TGCCGACACCATT CCAA AAAAGTGCCGGCA TTATTAGTGTCACGC Ssed_3477 4235344 - 4233476 - | putative methyl-accepting chemotaxis protein TERM 4151 4233733 - 4233750 + g 73 -9.9 -3.35327 | overlap 4233736 4233745 CAGCTTTGGCTTTTT CAACGGT TGTG ACCGTTG TTGTACGGCTTTCAT TERM 4152 4235676 - 4235697 + r 89 -11.7 -3.45634 | opp_overlap 4235679 ATGATGTCCCTTCAA GCATGTGTT AAAT AACACATGC TTACTTAGTTCAGAT Ssed_3478 4236233 - 4235733 - | hypothetical protein TERM 4153 4236700 - 4236684 - g 75 -5.1 -4.82667 | opp_overlap 4236684 CGATTACATGAAAAA CCAGC TGAAAAT GCTGG GTTTCGGTTATGACT Ssed_3479 4236355 - 4238946 + | leucyl-tRNA synthetase TERM 4154 4239042 - 4239010 - f 81 -12.2 -2.71144 | opp_overlap 4239013 4239016, overlap 4239013 4239016 TATGTTTCGCAATTA TAATGACACTGAGC GTTTT GCTCAGTGTTATTA CTAATAAGTGACTTC TERM 4155 4239039 - 4239013 - f 77 -9.5 -3.50853 | opp_overlap 4239013 4239016, overlap 4239010 4239016 GTTTCGCAATTATAA TGACACTGAGC GTTTT GCTCAGTGTTA TTACTAATAAGTGAC TERM 4156 4239013 - 4239039 + F 85 -12.4 -3.22298 | opp_overlap 4239013 4239010 4239016, overlap 4239016 GTTTCGCAATTATAA TGACACTGAGCG TTT TGCTCAGTGTTA TTACTAATAAGTGAC TERM 4157 4239036 - 4239016 - f 80 -11.2 -2.89447 | opp_overlap 4239013 4239016, overlap 4239013 4239010 TCGCAATTATAATGA CACTGAGC GTTTT GCTCAGTG TTATTACTAATAAGT TERM 4158 4239016 - 4239036 + F 89 -11.9 -3.75292 | opp_overlap 4239016 4239013 4239010, overlap 4239013 TCGCAATTATAATGA CACTGAGCG TTT TGCTCAGTG TTATTACTAATAAGT TERM 4159 4239140 - 4239116 - g 74 -10.7 -2.76815 | opp_overlap 4239106 4239138, overlap 4239115 ATGTTTCGCAATAAT GGCATTGAGCA TTT TGCTCAGCGCC GGTTGCGGCTTTAAA Ssed_3480 4239084 - 4239578 + | rare lipoprotein B Ssed_3481 4239646 - 4240686 + | DNA-directed DNA polymerase Ssed_3482 4240888 - 4241523 + | adenosine deaminase Ssed_3483 4241640 - 4241969 + | iojap-like protein Ssed_3484 4241969 - 4242439 + | SPOUT methyltransferase superfamily protein TERM 4160 4242764 - 4242778 + G 71 -4.2 -4.78077 | overlap 4242765 CCATGGCAAGCTCTT AGCTGA AAA TCAGCC TTTCTTTTCCTTAGA Ssed_3485 4242522 - 4244378 + | peptidoglycan glycosyltransferase Ssed_3486 4244375 - 4245481 + | rod shape-determining protein RodA Ssed_3487 4245673 - 4246692 + | lytic murein transglycosylase B Ssed_3488 4246679 - 4247476 + | rare lipoprotein A TERM 4161 4247676 - 4247689 + G 73 -8.1 -4.1235 | overlap 4247672 AAAACACTTATCCTT GCGAC CACG GTCGC TTGTTCTTTCGCTTA Ssed_3489 4247622 - 4248809 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 4162 4248836 - 4248851 + F 93 -10.4 -4.89729 | opp_overlap 4248828 4248840 GAAGTGATAGCTCAA GCCACC TCAG GGTGGC TTTTTGCATTTTATC Ssed_3490 4248948 - 4249214 + | hypothetical protein Ssed_3491 4249364 - 4250023 + | lipoate-protein ligase B TERM 4163 4250213 - 4250201 - g 71 -4.1 -4.66163 | overlap 4250204 4250205 AGCGTTACGTAAAAA TGAGC TTC ACTCA GTGTGTGAAGAGGCA Ssed_3492 4250016 - 4250981 + | lipoyl synthase TERM 4164 4251034 - 4251006 - T 90 -11.2 -3.97308 | gap 1, opp_overlap 4251006 TTCAAACAGATTAAA TAGCGTC-GTTGA GAAA TCAACTGACGCTA TTTTTTTATCTACTG TERM 4165 4251006 - 4251034 + T 100 -11.2 -5.74122 | gap 1, opp_overlap 4251006 TTCAAACAGATTAAA TAGCGTC-GTTGA GAAA TCAACTGACGCTA TTTTTTTATCTACTG Ssed_3493 4251501 - 4251040 - | ribosomal-protein-alanine acetyltransferase Ssed_3494 4251842 - 4251498 - | hypothetical protein TERM 4166 4252053 - 4252082 + r 100 -15.1 -3.25823 | opp_overlap 4252059, overlap 4252059 CCAAACGCCAGATGC GAAAAAGCCGAGC TAAT GCTCGGCTTTCTC TTAATGTGGCAGGGG TERM 4167 4252076 - 4252059 - R 100 -12.7 -4.64766 | opp_overlap 4252053 4252059 GCCAGATGCGAAAAA GCCGAGC TAAT GCTCGGC TTTCTCTTAATGTGG TERM 4168 4252059 - 4252076 + r 100 -12.7 -4.2586 | opp_overlap 4252059, overlap 4252053 GCCAGATGCGAAAAA GCCGAGC TAAT GCTCGGC TTTCTCTTAATGTGG TERM 4169 4252308 - 4252295 - R 74 -3.9 -5.12707 | overlap 4252299 4252301 CGAAACTTTAAAAAA TTAAC ATTA GTTAA TACTAAAGGACATTT TERM 4170 4253049 - 4253035 - R 75 -10 -3.07104 | opp_overlap 4253034 4253031 CCACAAGGATATATA GCATGC TTC GCATGC ACTATTTATCTCCCC TERM 4171 4253357 - 4253343 - R 72 -10 -2.55712 | opp_overlap 4253342 4253341 4253338, overlap 4253342 4253340 TCACATGGATAAGAT GCATGC TTC GCATGC GCTATTTACTTCCCC TERM 4172 4253414 - 4253436 + r 76 -7.6 -4.20981 | opp_overlap 4253414 4253415, overlap 4253415 CGTTAAACGAAAAAA CCCCCAACAC GAA GTGCTGGGGA TTTATCGTTTATTAG TERM 4173 4253436 - 4253414 - R 100 -12 -5.37593 | opp_overlap 4253414 4253415, overlap 4253415 CGTTAAACGAAAAAA CCCCCAACAC GAA GTGCTGGGGA TTTATCGTTTATTAG TERM 4174 4253435 - 4253415 - R 100 -13.3 -3.81472 | opp_overlap 4253414 4253415, overlap 4253414 GTTAAACGAAAAAAC CCCCAACAC GAA GTGCTGGGG ATTTATCGTTTATTA TERM 4175 4253415 - 4253435 + r 79 -11.1 -3.11504 | opp_overlap 4253415 4253414, overlap 4253414 GTTAAACGAAAAAAC CCCCAACAC GAA GTGCTGGGG ATTTATCGTTTATTA TERM 4176 4254814 - 4254825 + r 72 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 4177 4255321 - 4255337 + r 75 -8 -4.08546 | overlap 4255310 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 4178 4256119 - 4256131 + r 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 4179 4258635 - 4258652 + r 72 -8.5 -3.61178 | GAGTAAAATTTTTGA CTACTTC GTGA GAAGTAG TTTCGAATAACTCAA TERM 4180 4258830 - 4258820 - R 71 -4 -5.00616 | opp_overlap 4258812 4258820 4258820, overlap 4258822 TGCTTTTTTAAAAAA GATT TTT AATC GTTTAAGACGAGTTA TERM 4181 4259419 - 4259454 + r 86 -12 -3.31263 | opp_overlap 4259406 4259427, overlap 4259426 ACCTGACGCTATCGA CTCATAAAGTCAGCGA CTAA TAGCTGACGTTATGAG TTATCCAAATAGAAT Ssed_3495 4260275 - 4259496 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 4182 4260686 - 4260674 - g 77 -4.8 -4.91657 | AAGGAACAAAATAAA CAGC ATGCA GCTG ACATTTGCGAGAATG Ssed_3496 4260413 - 4260847 + | hypothetical protein TERM 4183 4260927 - 4260944 + T 83 -9.9 -3.92373 | opp_overlap 4260927 CTCCCCATAAAAAAA CAGACTC ATAT GAGTCTG TTTCTCACTCGAGTA TERM 4184 4260944 - 4260927 - T 100 -9.9 -5.60993 | opp_overlap 4260927 CTCCCCATAAAAAAA CAGACTC ATAT GAGTCTG TTTCTCACTCGAGTA Ssed_3497 4263611 - 4261038 - | ATPase TERM 4185 4261772 - 4261752 - G 80 -4.7 -5.10461 | overlap 4261762 CGTATCGAATAAAAA CTTCGCTAA AGC TTTGCAAAG CTCAGTCTTGCCGAC TERM 4186 4261918 - 4261938 + g 70 -7.6 -3.90097 | overlap 4261913 4261931 ACCCGAGAGTGAAGC GCTTCTTC CATAT GAAGGAGC TTCTCTTTCTCACCT TERM 4187 4263665 - 4263654 - R 75 -3 -5.30348 | ATTCAATAATAAAAA TATG GGGA CATA GGGTGATTTTTCAAG Ssed_3498 4264498 - 4263716 - | hypothetical protein TERM 4188 4263931 - 4263943 + g 100 -5.5 -5.60993 | opp_overlap 4263931 CTGGGGTAGAGATAA GAGCT AAG GGCTC TTTTTTTATGAAAAA TERM 4189 4264321 - 4264346 + g 100 -9.7 -4.7329 | opp_overlap 4264325 GGAAATCGGGAAGAT CAAAGCGCTCG TAAA TGAGCGCTCTG TTTTTCAGTACTTTT TERM 4190 4264342 - 4264325 - G 73 -8.4 -3.92592 | opp_overlap 4264321 ATCGGGAAGATCAAA GCGCTC GTAAAT GAGCGC TCTGTTTTTCAGTAC TERM 4191 4264494 - 4264517 + g 76 -8.2 -4.10925 | overlap 4264495 TTAATTAAGAATGGT GCCATCGATT AAAC AATCGATGGA TTTTCAAGCGTGTCT TERM 4192 4264495 - 4264516 + g 78 -11.7 -3.06073 | overlap 4264494 TAATTAAGAATGGTG CCATCGATT AAAC AATCGATGG ATTTTCAAGCGTGTC Ssed_3499 4265473 - 4264502 - | lysozyme TERM 4193 4264680 - 4264690 + g 80 -8.2 -4.33274 | opp_overlap 4264677 4264680 ATTTCAAAGAACTCA GGCG AAA CGCC TTTTGGTGGTCTGGG Ssed_3500 4265509 - 4266357 + | putative lipoprotein TERM 4194 4266414 - 4266379 - T 100 -15 -3.53811 | opp_overlap 4266389 4266400, overlap 4266382 4266389 GTTAGTCTGGCGAAA TTATAAAAAAGCTCCG GTAA CGGAGCTTTTTTATGA ACAAAAATAGCTCCT TERM 4195 4266411 - 4266382 - T 100 -16.7 -2.90615 | opp_overlap 4266389 4266400, overlap 4266379 4266389 AGTCTGGCGAAATTA TAAAAAAGCTCCG GTAA CGGAGCTTTTTTA TGAACAAAAATAGCT TERM 4196 4266389 - 4266404 + T 100 -10.4 -5.24129 | opp_overlap 4266382 4266379 4266389, overlap 4266400 CGAAATTATAAAAAA GCTCCG GTAA CGGAGC TTTTTTATGAACAAA TERM 4197 4266404 - 4266389 - T 100 -10.4 -5.42265 | opp_overlap 4266389 4266400, overlap 4266382 4266379 CGAAATTATAAAAAA GCTCCG GTAA CGGAGC TTTTTTATGAACAAA TERM 4198 4266719 - 4266703 - T 70 -9.5 -2.62616 | opp_overlap 4266705, overlap 4266705 TCAGTCGGTAGAGCA GAGGATT GAA AATCCTC GTGTCCCTGGTTCGA Ssed_3501 4268420 - 4266840 - | diguanylate cyclase Ssed_3502 4270340 - 4268478 - | methyl-accepting chemotaxis sensory transducer TERM 4199 4271156 - 4271139 - g 71 -2.7 -4.84527 | gap 1 TCGATATAGTAAAAA CCAA-TCG CCC CGAACTGG ATGTGCAGGTATGTG Ssed_3503 4270622 - 4271578 + | ornithine cyclodeaminase TERM 4200 4271586 - 4271610 + F 76 -10.8 -2.74755 | opp_overlap 4271590, overlap 4271584 4271586 4271590 GTAAATAGCCTGCCA GGAAGAGAGG AGCCC CCTCTCTTTC CTCTTTCCTCTTTCC TERM 4201 4271586 - 4271611 + F 72 -8.4 -3.59733 | gap 1, opp_overlap 4271590, overlap 4271586 4271584 4271590 GTAAATAGCCTGCCA GGAA-GAGAGG AGCCC CCTCTCTTTCC TCTTTCCTCTTTCCT TERM 4202 4271590 - 4271606 + F 75 -8 -4.03321 | opp_overlap 4271590, overlap 4271586 4271586 4271584 ATAGCCTGCCAGGAA GAGAGG AGCCC CCTCTC TTTCCTCTTTCCTCT TERM 4203 4271909 - 4271896 - g 71 -4.5 -4.62002 | opp_overlap 4271896 AGCAAGGAGATAAAA CCGCT TTCA AGCAG ATCTATTTGCGTCAT Ssed_3504 4271814 - 4272350 + | ECF subfamily RNA polymerase sigma-24 factor TERM 4204 4272486 - 4272443 - g 77 -4 -5.12474 | overlap 4272444 GACAAGATAGAAAAA CGCCTGGATGCGCCTA-TCA GCCTTA TGACTAAGCGC-TCCAGCCA TAACCTCTGGCGTAA Ssed_3505 4272350 - 4272883 + | hypothetical protein Ssed_3506 4272880 - 4273824 + | hypothetical protein TERM 4205 4273884 - 4273867 - T 100 -12.7 -4.86822 | opp_overlap 4273867 AAGCAGATAACAAAA GGCCTGC ATCT GCAGGCC TTACATTAAAACTTA TERM 4206 4273867 - 4273884 + T 85 -12.7 -3.18199 | opp_overlap 4273867 AAGCAGATAACAAAA GGCCTGC ATCT GCAGGCC TTACATTAAAACTTA Ssed_3507 4274667 - 4273897 - | pseudouridine synthase Ssed_3508 4274719 - 4275264 + | nodulation protein L Ssed_3509 4275510 - 4277594 + | endothelin-converting protein 1 TERM 4207 4277640 - 4277624 - f 86 -9.4 -4.07568 | opp_overlap 4277624 TTTTTTCTTTTAAAA GAGCGC GTTAA GCGCTC TTTTTTCATCTAAAA TERM 4208 4277624 - 4277640 + F 100 -9.4 -5.21709 | opp_overlap 4277624 TTTTTTCTTTTAAAA GAGCGC GTTAA GCGCTC TTTTTTCATCTAAAA Ssed_3510 4277771 - 4278574 + | hypothetical protein Ssed_3511 4278811 - 4279212 + | hypothetical protein TERM 4209 4279215 - 4279241 + F 79 -10.2 -3.45321 | opp_overlap 4279213 4279230 4279237, overlap 4279215 4279219 4279222 4279222 4279229 4279230 GATGCAAAGTTAAGT CTCAGTTCCTAG GAA CTAGGAACTAGG TTCTAGGTTCTAGGT TERM 4210 4279219 - 4279237 + F 81 -11.8 -2.6187 | opp_overlap 4279213 4279230, overlap 4279215 4279215 4279222 4279222 4279229 4279230 CAAAGTTAAGTCTCA GTTCCTAG GAA CTAGGAAC TAGGTTCTAGGTTCT TERM 4211 4279222 - 4279276 + F 95 -13 -3.45054 | opp_overlap 4279213 4279230 4279237, overlap 4279219 4279215 4279222 4279215 4279229 4279230 AGTTAAGTCTCAGTT CCTAGGAACTAGGAACTAGGTTCTAG GTT CTAGGTTCTAGGTTCTAGGTTCTAGG TTCTAGGTTCTAACA TERM 4212 4279222 - 4279262 + F 90 -12.7 -3.45321 | opp_overlap 4279213 4279230 4279237, overlap 4279219 4279215 4279215 4279222 4279229 4279230 AGTTAAGTCTCAGTT CCTAGGAACTAGGAACTAG GTT CTAGGTTCTAGGTTCTAGG TTCTAGGTTCTAGGT Ssed_3512 4279349 - 4279849 + | hypothetical protein TERM 4213 4279950 - 4279917 - T 100 -14.2 -5.4659 | opp_overlap 4279917 4279949 GAATATAAACAAAAA GCATCTATTTATAC CAAGCC GTATAAATAGATGC TTTTTTGTTTGCGAA TERM 4214 4279917 - 4279950 + T 100 -14.2 -5.63517 | opp_overlap 4279917, overlap 4279949 GAATATAAACAAAAA GCATCTATTTATAC CAAGCC GTATAAATAGATGC TTTTTTGTTTGCGAA Ssed_3513 4280599 - 4279976 - | glutathione S-transferase domain-containing protein TERM 4215 4280687 - 4280671 - H 87 -8.7 -4.58698 | opp_overlap 4280670 TTAAAGCAAAAAGAA CGGCCTT TGG AAGACCG CATTTACATTCTCTT Ssed_3514 4280952 - 4281326 + | hypothetical protein Ssed_3515 4281510 - 4282787 + | putative manganese transporter TERM 4216 4282969 - 4282946 - g 100 -9.6 -4.82901 | overlap 4282947 4282957 GCCGGGTCACAAAAA CTCGAGCAGA ACCT TCCGCTCGAA AATCGAGTCAGGGAG TERM 4217 4282968 - 4282947 - g 79 -10.9 -3.49419 | overlap 4282946 4282957 CCGGGTCACAAAAAC TCGAGCAGA ACCT TCCGCTCGA AAATCGAGTCAGGGA TERM 4218 4284032 - 4284002 - g 71 -9 -3.52906 | opp_overlap 4284002 4284004 4284006 GATAACCTCACAGAA TATAGCCATACCGG CTA CCTGTCCGGCTATA TGTCTATGACACTCT Ssed_3516 4282799 - 4284196 + | beta-lactamase TERM 4219 4284259 - 4284240 - f 79 -10 -3.56558 | TAATAGCAATCACAA GATCCCGC AGAC GCGGAATC ATCGAGATAAAGAAA Ssed_3517 4284282 - 4284746 + | hypothetical protein TERM 4220 4284794 - 4284767 - f 73 -7 -4.29845 | opp_overlap 4284772, overlap 4284772 GAAGCTAAGTTAAAA CAGAAGCACAGC TCAG GCTGTGCTTTTT TGTGTCTGATGATAC TERM 4221 4284789 - 4284772 - f 90 -11.3 -3.99228 | opp_overlap 4284772, overlap 4284767 TAAGTTAAAACAGAA GCACAGC TCAG GCTGTGC TTTTTTGTGTCTGAT TERM 4222 4284772 - 4284789 + F 100 -11.3 -5.43414 | opp_overlap 4284772 4284767 TAAGTTAAAACAGAA GCACAGC TCAG GCTGTGC TTTTTTGTGTCTGAT TERM 4223 4284841 - 4284851 + F 70 -8.2 -3.75153 | opp_overlap 4284838 TTAACCAATTCAGAG CCCC TCA GGGG TTTCAATTAAAGGCG TERM 4224 4284958 - 4284940 - f 70 -9.6 -2.74461 | opp_overlap 4284944, overlap 4284944 GACTGATGTTTAAAG CAAAGGGC AAA GCCCTTTA TGCTGCACTGGATGC TERM 4225 4284954 - 4284944 - f 75 -8.2 -4.06502 | opp_overlap 4284944, overlap 4284940 GATGTTTAAAGCAAA GGGC AAA GCCC TTTATGCTGCACTGG TERM 4226 4284944 - 4284954 + F 75 -8.2 -3.9712 | opp_overlap 4284944 4284940 GATGTTTAAAGCAAA GGGC AAA GCCC TTTATGCTGCACTGG TERM 4227 4286693 - 4286714 + G 72 -10.1 -3.01712 | opp_overlap 4286683 AATAACAGCTATATC TTCCCGGGC ATAG GCCTGGGAG TCTTAGCCGCCGGAG Ssed_3518 4285304 - 4286992 + | malate dehydrogenase TERM 4228 4287117 - 4287096 - f 73 -7.3 -4.05181 | opp_overlap 4287096 ACGAGAAAGATTAAA GCTACCAGT TAAT ATTGGTAGC TTTTTTTTGCCTTGG TERM 4229 4287096 - 4287117 + F 100 -9.5 -5.86332 | opp_overlap 4287096 ACGAGAAAGATTAAA GCTACCAGT TAAT ATTGGTAGC TTTTTTTTGCCTTGG Ssed_3519 4287626 - 4287901 + | hypothetical protein TERM 4230 4288241 - 4288221 - T 70 -9.8 -2.56908 | overlap 4288220 AACTTAACCAGTAAG GTATCTGC TGGCG GCAGATAC AAAAAAGGCCATGGT TERM 4231 4288267 - 4288248 - T 100 -10 -5.4251 | opp_overlap 4288248 GGCAGATACAAAAAA GGCCATGG TTGC CCATAGCC TTAGTTCCTAGCTGC Ssed_3520 4288795 - 4288358 - | hypothetical protein TERM 4232 4288828 - 4288852 + r 71 -9.9 -2.75 | overlap 4288826 TTAAAATTATTCGTT TATGTGCCCGG CTA CCGGGCACGGG TAATATACTTTCTCT Ssed_3521 4289401 - 4288877 - | PAP2 family protein TERM 4233 4289646 - 4289658 + G 77 -2.7 -5.1861 | TGAAAAAACGGTGGC TGAAC AGA GTTTA TTTTTTGCTGATGAA Ssed_3522 4289630 - 4291540 + | diguanylate cyclase Ssed_3523 4292347 - 4291541 - | extracellular solute-binding protein Ssed_3524 4292725 - 4293720 + | adenosine deaminase TERM 4234 4293777 - 4293753 - T 77 -10 -3.42379 | opp_overlap 4293754, overlap 4293744 4293754 AGATAAGCGAATTAA GGGGGAATCG ATAAA CGATTCCCCT TTTTTATCGCAATGC TERM 4235 4293776 - 4293754 - T 91 -13.5 -2.64705 | opp_overlap 4293754, overlap 4293753 4293744 GATAAGCGAATTAAG GGGGAATCG ATAAA CGATTCCCC TTTTTTATCGCAATG TERM 4236 4293754 - 4293776 + T 100 -13.5 -5.252 | opp_overlap 4293754 4293753 4293744 GATAAGCGAATTAAG GGGGAATCG ATAAA CGATTCCCC TTTTTTATCGCAATG Ssed_3525 4295326 - 4293866 - | major facilitator transporter TERM 4237 4293896 - 4293906 + g 73 -2.4 -5.00884 | overlap 4293890 TAGCACTTTTCTTTT GCCC AAA GAGC TTTTTTGACCCAGCT TERM 4238 4295669 - 4295681 + H 71 -6.9 -4.10453 | overlap 4295666 AACGTCTGAGGGCCT CCCGT AGG GCGGG TTTTAAAGCACTTTA TERM 4239 4296867 - 4296856 - g 73 -2.2 -5.10064 | overlap 4296848 TCGAACAGAGAAAAA CCTC TGAA GAAG TTGACGAGGTGGTCA Ssed_3526 4295811 - 4297007 + | putative iron-sulfur cluster binding protein TERM 4240 4297059 - 4297013 - T 93 -11.6 -4.42806 | opp_overlap 4297013 4297011 GGATGCTTAAATAAA GGTCCGAGTTACCAGGAGCTAG GCT CTAGGGCCTGGCAACTAAAACC TCGTTTTTTAATCTT Ssed_3527 4297279 - 4297067 - | hypothetical protein TERM 4241 4297537 - 4297558 + r 70 -5.9 -4.46854 | opp_overlap 4297537, overlap 4297532 CTCATTAATAAAAAA GCATCTC CATGCTAA GAGATGC TTTTCACTTTTATAT TERM 4242 4297558 - 4297537 - R 93 -6.6 -5.5112 | opp_overlap 4297537 4297532 CTCATTAATAAAAAA GCATCTCC ATGCTA AGAGATGC TTTTCACTTTTATAT Ssed_3528 4299150 - 4297594 - | alpha/beta fold family hydrolase/acetyltransferase-like protein Ssed_3529 4300052 - 4299168 - | 3-oxoadipate enol-lactonase Ssed_3530 4300229 - 4301335 + | hypothetical protein Ssed_3531 4301404 - 4302738 + | hypothetical protein TERM 4243 4302757 - 4302782 + F 90 -8.3 -5.10064 | opp_overlap 4302757 CAAACGGTAAAAACA GCTGCTTTGGT CCAG GCTAAAGCGGC TTTTTATATCTTCAG TERM 4244 4303585 - 4303568 - g 71 -6.9 -4.26076 | overlap 4303569 CTACTTTTATCAAAA GCCTGGC TCTA GCCAGGA AATCGAGAAAATTGG TERM 4245 4303584 - 4303569 - g 73 -10.4 -3.15324 | overlap 4303568 TACTTTTATCAAAAG CCTGGC TCTA GCCAGG AAATCGAGAAAATTG Ssed_3532 4303122 - 4304789 + | methyl-accepting chemotaxis sensory transducer TERM 4246 4305013 - 4304991 - T 93 -10.6 -5.15969 | TTTGAACCGAAAAAA GCCGTCCA GATAAAA TGGACGGC AAAGGGGGCACTCTT Ssed_3533 4306263 - 4305052 - | acetyl-CoA acetyltransferase Ssed_3534 4307006 - 4306272 - | 3-oxoacyl-(acyl carrier protein) reductase Ssed_3535 4307338 - 4308249 + | putative transcription regulator Ssed_3536 4308586 - 4310175 + | acetate/3-ketoacid CoA transferase Ssed_3537 4310297 - 4310716 + | MaoC domain-containing protein TERM 4247 4311573 - 4311557 - g 77 -10.1 -3.53012 | opp_overlap 4311560 GTTTCGGTGTGCAAA GCCCTGG TCA CCAAGGC CAGTGTCTATATCCC Ssed_3538 4310738 - 4311940 + | trans-2-enoyl-CoA reductase TERM 4248 4312013 - 4311992 - f 100 -14.5 -4.20749 | opp_overlap 4311992 CAATATCTTAAGAAA CACCTGCTC AATT GAGCAGGTG TTATCTAAAGTTCAC TERM 4249 4311992 - 4312013 + F 100 -14.5 -3.52192 | opp_overlap 4311992 CAATATCTTAAGAAA CACCTGCTC AATT GAGCAGGTG TTATCTAAAGTTCAC Ssed_3539 4312040 - 4313236 + | acetate kinase TERM 4250 4313851 - 4313837 - g 80 -8.5 -4.40561 | opp_overlap 4313836 CGGTGCCAAAAACAA GCGCC TCATT GGCGC AATTATTAATAAAGT TERM 4251 4314316 - 4314327 + G 73 -7.2 -4.2558 | opp_overlap 4314316 AGCAAGCCTTAGAGA CCGG TCTT CCGG TTTTCCTCGCCAATA TERM 4252 4315088 - 4315059 - g 72 -10.1 -3.06501 | gap 1 GATATCGCCATTCAA TCTGCCGAAT-CGG CCG CCGCATTCGGCATA GAACCGAGAGTAGCT Ssed_3540 4313346 - 4315484 + | phosphate acetyltransferase TERM 4253 4315509 - 4315546 + F 83 -9.9 -3.9444 | opp_overlap 4315496 4315510, overlap 4315510 AACATTGTCGTAGCA ATGGCAAGTACACCTGG TAGG CTATGTGTGCTTGCCAG TTTGATTCAGATTTG TERM 4254 4315510 - 4315545 + F 91 -13.4 -2.95941 | opp_overlap 4315496 4315510, overlap 4315509 ACATTGTCGTAGCAA TGGCAAGTACACCTGG TAGG CTATGTGTGCTTGCCA GTTTGATTCAGATTT TERM 4255 4315545 - 4315510 - f 70 -9 -3.14683 | opp_overlap 4315510 4315509, overlap 4315496 ACATTGTCGTAGCAA TGGCAAGTACACCTGG TAGG CTATGTGTGCTTGCCA GTTTGATTCAGATTT TERM 4256 4316343 - 4316323 - g 78 -6.2 -4.68384 | gap 1 ATCTATTGAACAAAA TGCAG-AGG GTTA CCTACTGCA AAAAGGGAAAATTGG Ssed_3541 4315709 - 4316641 + | hypothetical protein TERM 4257 4316722 - 4316680 - T 82 -12 -3.03212 | opp_overlap 4316687, overlap 4316673 4316685 AAGACTAATGATAGA GCGAAGATGCTAGGTTCGCG TTC CTAGAGCCTAGCATCTTCGA GCTTCGAGGAGCTCC TERM 4258 4316717 - 4316685 - T 70 -9.1 -3.17685 | opp_overlap 4316687, overlap 4316680 4316673 TAATGATAGAGCGAA GATGCTAGGTTCGCG TTC CTAGAGCCTAGCATC TTCGAGCTTCGAGGA Ssed_3542 4318547 - 4316856 - | glucose-methanol-choline oxidoreductase TERM 4259 4317719 - 4317694 - G 76 -11.1 -3.21912 | overlap 4317696 CTCTCAATGGAGTAA CAGGCCACCAC GAAA ATGGTGGCCAG GACCCGTACTGATTC TERM 4260 4317717 - 4317696 - G 82 -12.3 -3.17319 | overlap 4317694 CTCAATGGAGTAACA GGCCACCAC GAAA ATGGTGGCC AGGACCCGTACTGAT Ssed_3543 4319319 - 4318588 - | hypothetical protein TERM 4261 4318652 - 4318637 - G 73 -10.4 -3.13504 | overlap 4318635 GGCTGAGGAAAACCA GGCTGG TGCT CCAGCC ACTTCCAGCCAATAC TERM 4262 4319237 - 4319278 + g 72 -6.1 -4.40358 | gap 1, overlap 4319239 4319277 GCAGATGTGAGCCCC TTGTC-GTTAGGAAATAAAG CAG TTTTATTTCCTAACTGACTC TTTTCTAAGATACCT TERM 4263 4319239 - 4319276 + g 93 -13.1 -3.80877 | gap 1, overlap 4319237 AGATGTGAGCCCCTT GTC-GTTAGGAAATAAAG CAG TTTTATTTCCTAACTGAC TCTTTTCTAAGATAC Ssed_3544 4319912 - 4319313 - | hypothetical protein Ssed_3545 4320143 - 4321531 + | D-amino acid dehydrogenase TERM 4264 4321638 - 4321617 - g 82 -11.7 -3.35679 | opp_overlap 4321617 TCTGTTTATTCATAA TGATAAGCG CTAT CGCTTATCA TTTCCTATCTCCCAA TERM 4265 4321617 - 4321638 + G 88 -11.7 -3.88498 | opp_overlap 4321617 TCTGTTTATTCATAA TGATAAGCG CTAT CGCTTATCA TTTCCTATCTCCCAA Ssed_3546 4321616 - 4321942 + | hypothetical protein Ssed_3547 4322013 - 4322354 + | hypothetical protein Ssed_3548 4323237 - 4322689 - | redoxin domain-containing protein Ssed_3549 4324082 - 4323264 - | DsbA oxidoreductase Ssed_3550 4326328 - 4324196 - | putative suppressor for copper-sensitivity B precursor Ssed_3551 4326976 - 4326500 - | hypothetical protein TERM 4266 4326652 - 4326614 - G 80 -7.5 -4.5032 | gap 1, opp_overlap 4326623 4326626, overlap 4326616 GAGAGGAAGAAGAAA CAGCAAGACTAACAGCGC TATG GCACTGTT-GTCTTCCAG ACATAAACGCATCGA TERM 4267 4326650 - 4326616 - G 73 -8.7 -3.8457 | gap 1, opp_overlap 4326623 4326626, overlap 4326614 GAGGAAGAAGAAACA GCAAGACTAACAGCGC TATG GCACTGTT-GTCTTCC AGACATAAACGCATC TERM 4268 4326888 - 4326878 - G 71 -8.2 -3.71751 | opp_overlap 4326884 ATACAACACAGATAA CGGC CCG GCCG TCGCCCCTTGTGCTC Ssed_3552 4327370 - 4328920 + | ferredoxin-dependent glutamate synthase Ssed_3553 4329424 - 4331442 + | hypothetical protein TERM 4269 4332209 - 4332226 + G 82 -5.5 -5.10064 | opp_overlap 4332209, overlap 4332199 TTTGACCCCAGAAAA TAGCGCC TTTT GGGGCTA TTTTTATATGTTGCG Ssed_3554 4331445 - 4332599 + | hypothetical protein TERM 4270 4332723 - 4332762 + T 100 -19.5 -3.36202 | opp_overlap 4332712 4332711, overlap 4332724 GAACGCCACTTCGTG GCCAGGAGTTCCTAGGT TCTAGT ACCTAGGAACTCCTGAC TTCTCAGCTCTATCT Ssed_3555 4335115 - 4332806 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 4271 4333615 - 4333652 + g 79 -9.7 -3.91084 | CGACCATATCGTTAC GCTCGGCCTCGCCGTGC ACCA GCACATCGATGCCCAGC TTTAGTTGACGCTCG Ssed_3556 4335329 - 4336234 + | LysR family transcriptional regulator Ssed_3557 4337094 - 4336366 - | putative signal transduction protein Ssed_3558 4338087 - 4337482 - | lipolytic enzyme, G-D-S-L TERM 4272 4338272 - 4338254 - R 100 -12.4 -5.74122 | TAGCACATAAAAAAA GCCAGACC TAA GGTCCGGC TAAAAGGTAAGGTAC Ssed_3559 4340310 - 4338313 - | TonB-dependent receptor TERM 4273 4340259 - 4340271 + g 74 -6.3 -4.41897 | CCAGAGCACTGCCGA TTAGC ATG GCTAA TTTTGATAATTTGTT Ssed_3560 4341591 - 4340803 - | hypothetical protein TERM 4274 4341726 - 4341694 - R 88 -7.8 -5.06414 | gap 1, opp_overlap 4341696, overlap 4341696 GGGGCTCAACAAAAA CAGAGGCAAGG-GAA ACGA CTCTCCTTGCCTCTT CTGAGAAACTATAAA TERM 4275 4341724 - 4341696 - R 89 -10.4 -4.16307 | gap 1, opp_overlap 4341696, overlap 4341694 GGCTCAACAAAAACA GAGGCAAGG-GAA ACGA CTCTCCTTGCCTC TTCTGAGAAACTATA TERM 4276 4341696 - 4341724 + r 75 -9.7 -3.29829 | gap 1, opp_overlap 4341696 4341694 GGCTCAACAAAAACA GAGGCAAGG-GA AACGAC TCTCCTTGCCTC TTCTGAGAAACTATA Ssed_3561 4342766 - 4341816 - | polysulphide reductase, NrfD Ssed_3562 4343458 - 4342763 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_3563 4343973 - 4343473 - | hypothetical protein TERM 4277 4344022 - 4344049 + r 100 -18.6 -3.34962 | opp_overlap 4344009 ATTCTTGGTGGAGAG TGGCACCGAACA GAGC TGTTCGGTGCCA TTATCGGCTATGCGG Ssed_3564 4344560 - 4344057 - | hypothetical protein Ssed_3565 4344938 - 4345918 + | LysR family transcriptional regulator Ssed_3566 4346959 - 4345961 - | LysR family transcriptional regulator TERM 4278 4347241 - 4347229 - H 70 -2.6 -5.16071 | opp_overlap 4347237, overlap 4347230 AAGCACGAATAAAAA GCAC CTTTT GCGC AAGGCGGCATAGGTT TERM 4279 4347333 - 4347321 - H 75 -10.5 -3.07622 | AGAGAGTTCAGGCAA GGCGC ATC GCGCC AATTCGACGCCTGGA Ssed_3567 4347419 - 4348963 + | hypothetical protein Ssed_3568 4348982 - 4349569 + | acetyltransferase-like protein TERM 4280 4350259 - 4350245 - g 74 -10 -3.48593 | CAGGTGTTGATAGAA CTGCTC ACC GAGCAG TATCCGCTGGATCAT Ssed_3569 4349678 - 4350499 + | uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase TERM 4281 4350639 - 4350588 - f 100 -15.5 -3.41671 | gap 2, overlap 4350591 4350621 GAAAGATGGAACGAA CAAGCCATCGCAGCTACGAGCTCCT ACAT AAGAGCTCGTAGCT-C-ATAGCTCG TAGCTCGTAGCTCGT TERM 4282 4350636 - 4350591 - f 100 -13.6 -3.83006 | gap 2, overlap 4350588 4350621 AGATGGAACGAACAA GCCATCGCAGCTACGAGCTCCT ACAT AAGAGCTCGTAGCT-C-ATAGC TCGTAGCTCGTAGCT Ssed_3570 4350711 - 4351019 + | hypothetical protein TERM 4283 4351043 - 4351062 + G 77 -5 -4.83593 | CCAAACGACTTAAAA GAGGTAGA ATTT TTTGCCTC TTTTTGATGCTTATT Ssed_3571 4351012 - 4352844 + | diguanylate cyclase TERM 4284 4352820 - 4352839 + F 73 -7.8 -3.79747 | opp_overlap 4352820 4352821, overlap 4352821 TGATGTGAGCGAAAA CCGTCAGG GTCA CCTGACGC TTTAATGGTCACTGA TERM 4285 4352839 - 4352820 - f 77 -7.8 -4.1899 | opp_overlap 4352820 4352821, overlap 4352821 TGATGTGAGCGAAAA CCGTCAGG GTCA CCTGACGC TTTAATGGTCACTGA TERM 4286 4352838 - 4352821 - f 82 -11.3 -3.11073 | opp_overlap 4352821 4352820, overlap 4352820 GATGTGAGCGAAAAC CGTCAGG GTCA CCTGACG CTTTAATGGTCACTG TERM 4287 4352821 - 4352838 + F 80 -11.3 -2.87527 | opp_overlap 4352820 4352821, overlap 4352820 GATGTGAGCGAAAAC CGTCAGG GTCA CCTGACG CTTTAATGGTCACTG TERM 4288 4352987 - 4352970 - g 71 -2.7 -5.00616 | CCCCTCCTCAAAAAA CTCTCTC CCGA AAAAGAG CCTCATCCACAGAGC Ssed_3572 4352947 - 4353465 + | hypothetical protein Ssed_3573 4353810 - 4356272 + | chaperone endopeptidase Clp ATP-binding chain B,ClpB TERM 4289 4356310 - 4356341 + T 100 -19.6 -3.5936 | overlap 4356302 TAACACCTGATGTGG CAGAGGGTCAGTCT TTAC AGGCTGACCCTCTG TTTAACACATTTACA Ssed_3574 4356908 - 4356375 - | hypothetical protein Ssed_3575 4358293 - 4357052 - | Bcr/CflA subfamily drug resistance transporter TERM 4290 4357320 - 4357286 - G 73 -2.1 -5.03314 | gap 1, overlap 4357289 CTGAGCCGGAAAAAA TGACAT-GGCAGCCGC AATG GCGTTCGCCGATATCA GTCCCAATAGCAGGT Ssed_3576 4358395 - 4359324 + | carbonate dehydratase TERM 4291 4359760 - 4359742 - T 100 -14.6 -5.4251 | opp_overlap 4359742 TCCAGACACAAAAAA GCGAAGCC TAA GGCTTCGC TTTTCAATACTTCAG TERM 4292 4359742 - 4359760 + T 100 -14.6 -4.23892 | opp_overlap 4359742 TCCAGACACAAAAAA GCGAAGCC TAA GGCTTCGC TTTTCAATACTTCAG Ssed_3577 4361041 - 4359824 - | Na(+)-translocating NADH-quinone reductase subunit F Ssed_3578 4361708 - 4361100 - | Na(+)-translocating NADH-quinone reductase subunit E Ssed_3579 4362341 - 4361718 - | Na(+)-translocating NADH-quinone reductase subunit D TERM 4293 4361931 - 4361909 - G 75 -7.8 -4.30809 | CAACACCGAGTAAAA TAACGCCATA ACC CATGGCATTA CCCACTGCATCTACA TERM 4294 4361947 - 4361964 + g 71 -4 -4.72272 | opp_overlap 4361948, overlap 4361948 CCCACTGCATCTACA ACCGCC AGATGA GGCGGG TTTTTCATGGCGAAC Ssed_3580 4363113 - 4362343 - | Na(+)-translocating NADH-quinone reductase subunit C TERM 4295 4363075 - 4363098 + g 77 -4 -5.00884 | gap 1, opp_overlap 4363082, overlap 4363080 4363082 CAGTGTGACTGTGAA GATCATAGTTC CAA GAACTGT-ATC TTTTTTAAAGGCCAT Ssed_3581 4364317 - 4363103 - | Na(+)-translocating NADH-quinone reductase subunit B Ssed_3582 4365767 - 4364406 - | Na(+)-translocating NADH-quinone reductase subunit A TERM 4296 4364528 - 4364518 - G 71 -8.2 -3.66178 | overlap 4364519 TCGTCCAACTCTAAA GCGC CCA GCGC CTGAGCCTCATCGGT TERM 4297 4364631 - 4364619 - G 76 -9.1 -3.794 | GTCTAACTGACCAAA CGCCA TCA TGGCG CGGGCAGCGCCGCCA TERM 4298 4365714 - 4365729 + g 79 -3.2 -5.30189 | AGGTTCCCCGGCAAT GGGC ACATCTAA GCCC TTTTTTACTATTCTA TERM 4299 4366612 - 4366576 - g 75 -5.7 -4.61566 | overlap 4366578 4366581 TGGTAAACTACAAAA GAGCACTGCCATGCTGA TCT TCAGCAGAGCCGGCCTC ATCATGCTACTGCTA Ssed_3583 4366328 - 4368544 + | extracellular solute-binding protein TERM 4300 4368869 - 4368886 + T 90 -12.7 -3.67775 | opp_overlap 4368869 TCCGGAAACAAAAAA GCCGGGT ATTA ACCCGGC TTCTTAACTAACGCT TERM 4301 4368886 - 4368869 - T 100 -12.7 -5.63517 | opp_overlap 4368869 TCCGGAAACAAAAAA GCCGGGT ATTA ACCCGGC TTCTTAACTAACGCT Ssed_3584 4369881 - 4368916 - | ABC sugar transporter inner membrane translocator TERM 4302 4369684 - 4369674 - G 80 -8.2 -4.44187 | overlap 4369675 ACAGACAAACAGAAA CGCC GAT GGCG GCAAGCAAGCCCAGC Ssed_3585 4371015 - 4369885 - | ABC transporter inner-membrane translocator Ssed_3586 4372601 - 4371012 - | ABC transporter ATP-binding protein TERM 4303 4371900 - 4371910 + g 70 -2.4 -4.96848 | CAGCTCTTCCTTATT CGTC TCT GCCG TTTTTCTGTGCGCGA TERM 4304 4372669 - 4372645 - R 93 -11.4 -4.58395 | overlap 4372668 GGTACTTCTCAAAAA GCTCTCCGGC TTGAG GCAGGAGAGC GAACTTTCACTTTTA Ssed_3587 4373733 - 4372729 - | basic membrane lipoprotein TERM 4305 4374530 - 4374545 + r 84 -10.4 -3.84451 | opp_overlap 4374530 CATGTCATAAAAAAA GGCACC CTAA GGTGCC TTTGACTTTGCAGGA TERM 4306 4374545 - 4374530 - R 100 -10.4 -5.626 | opp_overlap 4374530 CATGTCATAAAAAAA GGCACC CTAA GGTGCC TTTGACTTTGCAGGA Ssed_3588 4376907 - 4374670 - | decaheme cytochrome c Ssed_3589 4377318 - 4378274 + | transcriptional regulator-like protein Ssed_3590 4378291 - 4379241 + | transcriptional regulator-like protein Ssed_3591 4379584 - 4379357 - | hypothetical protein Ssed_3592 4379862 - 4380401 + | thioredoxin peroxidase Ssed_3593 4381267 - 4380467 - | hypothetical protein Ssed_3594 4382275 - 4381451 - | amino acid ABC transporter periplasmic protein TERM 4307 4381842 - 4381828 - G 74 -2.8 -5.00884 | overlap 4381831 AGGTTTTCCAAAAAA CATCAT CAT AGGATG CCCCCCGCCAAACAC TERM 4308 4382708 - 4382674 - H 80 -2.3 -5.53991 | gap 2 CACCTATCAAAAAAA GCCGATTTCTG-GC-AT AAT ATGGCGCAGAAATAAGC GAGTATATGCTTGTC TERM 4309 4382832 - 4382818 - g 83 -7.1 -4.67651 | opp_overlap 4382822, overlap 4382820 ATATGTTAAAAGAAA CCGTG CCTGC CACGG CCAGACTCTTCCAAC Ssed_3595 4382745 - 4383779 + | dihydroorotase TERM 4310 4383852 - 4383837 - T 95 -11.8 -4.31164 | opp_overlap 4383837 GTCAGATAATAGAAA GCCCGC ATTA GCGGGC TTTTCTCTTCATGTA TERM 4311 4383837 - 4383852 + T 100 -11.8 -4.7219 | opp_overlap 4383837 GTCAGATAATAGAAA GCCCGC ATTA GCGGGC TTTTCTCTTCATGTA Ssed_3596 4385003 - 4383882 - | hypothetical protein TERM 4312 4384625 - 4384603 - G 72 -6.2 -4.46212 | overlap 4384605 TTTTCCAGGACAAAA CCGGCCGTAA CAG CCACGACCAG GGCTATGGTGAAGTA TERM 4313 4384694 - 4384681 - G 71 -4.5 -4.59342 | overlap 4384677 GTCACCACAAACAAA CCGAT GATC ACCGG ATTGAGCAAGGGGCT TERM 4314 4384734 - 4384722 - G 79 -3.3 -5.18726 | opp_overlap 4384732 GCTGGAGAACAAAAA CACCA TCA TGGGG CCAAAACCCGCCCTT TERM 4315 4385969 - 4385953 - g 70 -2.1 -5.00616 | overlap 4385955 CGGTGGGCTAAAAAA CCGCTTG CTG CTAGCCG ACGTTGGCCCAATCG Ssed_3597 4385228 - 4386658 + | glutathione synthase Ssed_3598 4387060 - 4386752 - | ArsR family transcriptional regulator Ssed_3599 4387239 - 4388621 + | hypothetical protein TERM 4316 4388674 - 4388690 + F 73 -6.6 -4.20516 | ACCTAACGAGTCTGA CTGACT ACATG AGTCAG TTTATTGAATACACG Ssed_3600 4388722 - 4389000 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 4317 4389085 - 4389072 - T 70 -9.5 -2.6927 | opp_overlap 4389070 ATTCTCCATATAGGA GCGGC TTTA GCCGC GAATGTTTTGGGGCT Ssed_3601 4389451 - 4389206 - | hypothetical protein Ssed_3602 4389934 - 4390323 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 4318 4390840 - 4390824 - g 70 -9.5 -3.18452 | ATGATGCCAAGTTAA CAGAGTT CGA AACTCTG GGCGCGACACTCGTC Ssed_3603 4390688 - 4391614 + | hypothetical protein Ssed_3604 4391758 - 4393158 + | hypothetical protein Ssed_3605 4393268 - 4394143 + | hypothetical protein Ssed_3606 4394225 - 4395091 + | hypothetical protein TERM 4319 4395130 - 4395171 + T 73 -10.5 -2.77534 | gap 2, opp_overlap 4395130 4395131 4395134 4395141, overlap 4395129 4395141 ATCAACCTGATACAA GGCACA-AAAA-ACGAACC TTAAAT GGTTCGTTTTTTATGTGCC CTCTTTGTATACCTT TERM 4320 4395171 - 4395130 - T 79 -10.5 -3.52459 | gap 2, opp_overlap 4395130 4395129 4395141, overlap 4395131 4395134 4395141 ATCAACCTGATACAA GGCACA-AAAA-ACGAACC TTAAAT GGTTCGTTTTTTATGTGCC CTCTTTGTATACCTT TERM 4321 4395168 - 4395131 - T 76 -10.8 -2.70994 | opp_overlap 4395130 4395129 4395141, overlap 4395130 4395134 4395141 TCAACCTGATACAAG GCACAAAAAACGAACC TTAAAT GGTTCGTTTTTTATGT GCCCTCTTTGTATAC TERM 4322 4395165 - 4395134 - T 76 -11.1 -2.63257 | opp_overlap 4395130 4395129 4395141, overlap 4395131 4395130 4395141 ACCTGATACAAGGCA CAAAAAACGAACC TTAAAT GGTTCGTTTTTTA TGTGCCCTCTTTGTA TERM 4323 4395158 - 4395141 - T 89 -7 -5.3236 | opp_overlap 4395130 4395129 4395141, overlap 4395134 4395131 4395130 ACAAGGCACAAAAAA CGAACC TTAAAT GGTTCG TTTTTTATGTGCCCT TERM 4324 4395141 - 4395158 + T 93 -7 -5.37043 | opp_overlap 4395141 4395134 4395131 4395130, overlap 4395130 4395129 ACAAGGCACAAAAAA CGAACC TTAAAT GGTTCG TTTTTTATGTGCCCT Ssed_3607 4395649 - 4395185 - | hypothetical protein Ssed_3608 4396842 - 4395820 - | oxidoreductase domain-containing protein TERM 4325 4396424 - 4396435 + g 71 -4.4 -4.72007 | CCAATGGTGCCGAGT CGAA TAAT TTCG TTTATTTTGCTGGCA TERM 4326 4396573 - 4396587 + g 76 -7 -4.3739 | opp_overlap 4396566 ACACAAAATGGCCTT GCCGGC GTT GGCGGC TTTTATCACAAAGTC Ssed_3609 4397148 - 4396846 - | hypothetical protein Ssed_3610 4397250 - 4398149 + | hypothetical protein Ssed_3611 4399083 - 4398178 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 4327 4399267 - 4399244 - R 100 -16.8 -5.06016 | ATGATATAAATAAAA GCAGCCCATC GAAC GATGGGCTGC TACTGAATACCAGTC Ssed_3612 4400001 - 4399291 - | purine nucleoside phosphorylase TERM 4328 4400375 - 4400354 - R 79 -8.8 -4.11484 | CCTAATCTGGTAAAA TTAGCCCA CTAGCT TGGGCTAA CAACAGGAAAGTATC Ssed_3613 4401018 - 4400419 - | short chain dehydrogenase TERM 4329 4401852 - 4401875 + G 80 -4.5 -5.14563 | ATTTGCGGTCGCCGA TCAGGGGGT AGCTCA ACTCCCCGA TTTTTTACTACAAGA Ssed_3614 4401142 - 4402023 + | LysR family transcriptional regulator Ssed_3615 4403038 - 4402088 - | LysR family transcriptional regulator Ssed_3616 4403196 - 4404008 + | enoyl-CoA hydratase/isomerase family protein Ssed_3617 4404054 - 4404935 + | oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase TERM 4330 4404950 - 4404972 + T 89 -12.1 -3.76373 | opp_overlap 4404950 AATGAGTTCATTAAA GCCGTGATA TCCGT TATCACGGC TTTGCGTGTTACAAA TERM 4331 4404972 - 4404950 - T 89 -12.1 -3.75437 | opp_overlap 4404950 AATGAGTTCATTAAA GCCGTGATA TCCGT TATCACGGC TTTGCGTGTTACAAA Ssed_3618 4406179 - 4405091 - | hypothetical protein TERM 4332 4405233 - 4405253 + g 75 -6.1 -4.57569 | GTATTGTAGGTTCGA CGATCACCG AAG TGCTGATCG TTTTTACCGCCATCG TERM 4333 4406760 - 4406776 + G 73 -10.1 -3.17982 | opp_overlap 4406760 4406758 AGACAGAGAGGAAGA GTTGGGG CAC CCCCAGC TTGCTAAAGATTTCT Ssed_3619 4406605 - 4407138 + | FMN reductase, NADPH-dependent Ssed_3620 4407354 - 4408976 + | GAF containing protein TERM 4334 4409473 - 4409463 - g 71 -4.6 -4.56736 | ACCGAAGAAGCAAAA CCGG ATG CCAG AGCCGCGCTTATGCC TERM 4335 4409788 - 4409818 + G 74 -11.3 -3.09492 | gap 1, opp_overlap 4409783 4409782 CGGGTAAAATTGTCA TCAT-TGGCGCCGA TGCC TCGGCGCTACATGA TGTTAGAGTTACGCC TERM 4336 4410187 - 4410169 - g 83 -2.3 -5.63103 | opp_overlap 4410172 4410185 GGGCAAGGAAAAAAA CGGTCGA GCTCT TCAGCCG ATTCGTCGACCCGGT TERM 4337 4410557 - 4410534 - g 81 -11.1 -3.61715 | GAGCTGGGGGAACAA GATGCCAAC TTTGAT GTTGGCATC GGCATCCACTCGGGC Ssed_3621 4408986 - 4410809 + | putative adenylate/guanylate cyclase Ssed_3622 4410806 - 4411369 + | hypothetical protein Ssed_3623 4411366 - 4412250 + | TPR repeat-containing Zn-dependent protease Ssed_3624 4413318 - 4412293 - | diguanylate cyclase Ssed_3625 4414166 - 4413591 - | hypothetical protein TERM 4338 4414299 - 4414273 - R 93 -8 -5.4505 | overlap 4414275 CTCTCTAATAAAAAA TCCACTCGCAAG CTC CCCACGAGTGAA ACTCTTACGCTGTCA TERM 4339 4414437 - 4414415 - R 100 -12.8 -5.19879 | opp_overlap 4414415 TGGTAAACATAAAAA GGCTTCTGCA CGC TACAGAAGCC TTTGTTGTCTGGGCT TERM 4340 4414415 - 4414437 + r 91 -10.6 -4.39329 | opp_overlap 4414415 TGGTAAACATAAAAA GGCTTCTGCA CGC TACAGAAGCC TTTGTTGTCTGGGCT Ssed_3626 4416225 - 4414495 - | hypothetical protein TERM 4341 4415748 - 4415759 + g 85 -3 -5.63374 | GAACCGGGTCGAAGT TCAA TATG TTGA TTTTTTTGATCTTAC Ssed_3627 4416781 - 4417683 + | DNA gyrase inhibitor TERM 4342 4417749 - 4417718 - f 79 -9.5 -3.65671 | opp_overlap 4417722, overlap 4417722 TAGAATCATATACAA CAAAGAGAGAGGC TTAAGT GCTTCCCTCTTTG ATCTCAATCAGGCTT TERM 4343 4417759 - 4417774 + F 70 -3.2 -4.87803 | opp_overlap 4417760, overlap 4417760 TCTTTGATCTCAATC AGGCTT TCTT AAGCCA TTTTCTTTCGGAGTA TERM 4344 4418245 - 4418232 - g 73 -5.3 -4.55295 | CGCTGGATAAAGAAA TTCGA GAGC TCGAA TTAAAGGGCGCGCCA Ssed_3628 4418105 - 4418350 + | hypothetical protein TERM 4345 4418432 - 4418377 - f 100 -20.1 -3.63627 | opp_overlap 4418386 4418389, overlap 4418386 CTGCGATACCCGAAA GCTCAAAAATAAGCAGACCTGAGTA TAGTTC TACTCAGGTCCGCTTATTCTTATGC CTCATCCGCGAAACA TERM 4346 4418386 - 4418423 + F 100 -15.8 -3.82824 | opp_overlap 4418386 4418377, overlap 4418389 CCGAAAGCTCAAAAA TAAGCAGACCTGAGTA TAGTTC TACTCAGGTCCGCTTA TTCTTATGCCTCATC TERM 4347 4418423 - 4418386 - f 100 -18 -4.70879 | opp_overlap 4418386 4418389, overlap 4418377 CCGAAAGCTCAAAAA TAAGCAGACCTGAGTA TAGTTC TACTCAGGTCCGCTTA TTCTTATGCCTCATC TERM 4348 4418389 - 4418420 + F 100 -13.1 -4.03888 | opp_overlap 4418386 4418377, overlap 4418386 AAAGCTCAAAAATAA GCAGACCTGAGTA TAGTTC TACTCAGGTCCGC TTATTCTTATGCCTC TERM 4349 4419165 - 4419149 - g 74 -4.4 -4.90455 | gap 1, overlap 4419140 4419139 ACAGACCGAGAAAAA CCTC-GC GGCG GCAGAGG AACACAAGCTCGAAC Ssed_3629 4418556 - 4419452 + | band 7 protein TERM 4350 4419517 - 4419535 + T 100 -11.8 -5.53436 | opp_overlap 4419517 TCTTAAACAAAAAAA GGGATATC TGA GATATCCC TTTTTTATCTTCTCT TERM 4351 4419535 - 4419517 - T 100 -11.8 -5.95539 | opp_overlap 4419517 TCTTAAACAAAAAAA GGGATATC TGA GATATCCC TTTTTTATCTTCTCT Ssed_3630 4420134 - 4419580 - | OmpA domain-containing protein Ssed_3631 4420518 - 4422278 + | hypothetical protein TERM 4352 4422344 - 4422360 + F 100 -13.7 -4.72272 | opp_overlap 4422344 ATGTTAAGCAATAAA GCCCGCA CCA TGCGGGC TTTTTACTGGCGGAC TERM 4353 4422360 - 4422344 - f 100 -13.7 -4.32951 | opp_overlap 4422344 ATGTTAAGCAATAAA GCCCGCA CCA TGCGGGC TTTTTACTGGCGGAC Ssed_3632 4422458 - 4422775 + | hypothetical protein TERM 4354 4424715 - 4424745 + G 85 -10.4 -4.25056 | opp_overlap 4424708 ACGGCAAAGAAGCCC CGGTGATCGATGGT GTA ACCGGCGATCAACG TTTCTTCCTCGCCTG Ssed_3633 4422878 - 4424947 + | endothelin-converting protein 1 TERM 4355 4425074 - 4425051 - T 100 -15.4 -5.0925 | opp_overlap 4425051 CGTTAAAAGTAAAAA TGCCAGTCAG AAAT CTGACTGGCA TTTTTTACATCGGCT TERM 4356 4425051 - 4425074 + T 100 -15.4 -5.09225 | opp_overlap 4425051 CGTTAAAAGTAAAAA TGCCAGTCAG AAAT CTGACTGGCA TTTTTTACATCGGCT Ssed_3634 4426388 - 4425102 - | long-chain fatty acid transport protein Ssed_3635 4427032 - 4426784 - | hypothetical protein TERM 4357 4427197 - 4427174 - R 71 -6 -4.26076 | gap 1, overlap 4427162 CTACTCTCAGTAAAA GAGTGCTCAGC CAG GCTGAGT-CTC AAGTTTGCGGATTCT Ssed_3636 4429477 - 4427180 - | molybdopterin oxidoreductase TERM 4358 4427269 - 4427285 + g 71 -4.5 -4.64657 | CCGATTGAGTCTGCT CTATGAT GCC ATTATAG TTTTTGCCACTTTCC Ssed_3637 4429845 - 4431263 + | hypothetical protein TERM 4359 4431339 - 4431321 - f 91 -13.2 -2.92653 | opp_overlap 4431313 4431335, overlap 4431312 4431330 CGATAACTTCAGACA GCCACCAA GCT TTGGTGGC TGCCAGCCTCTTGGC Ssed_3638 4431615 - 4433834 + | TonB-dependent receptor, putative TERM 4360 4433931 - 4433891 - T 75 -10.5 -3.10905 | opp_overlap 4433892 4433893 4433897, overlap 4433882 TGACAAGCGAGTGAA CCGCAAGTGATGACAGTCT CAA AGTCTGTCATCACTTACCT TCTTGGAAACAAAAG TERM 4361 4433892 - 4433930 + T 89 -11.8 -3.61398 | opp_overlap 4433882 4433891, overlap 4433893 4433897 GACAAGCGAGTGAAC CGCAAGTGATGACAGTCT CAA AGTCTGTCATCACTTACC TTCTTGGAAACAAAA TERM 4362 4433893 - 4433929 + T 95 -15.3 -2.76696 | opp_overlap 4433882 4433891, overlap 4433892 4433897 ACAAGCGAGTGAACC GCAAGTGATGACAGTCT CAA AGTCTGTCATCACTTAC CTTCTTGGAAACAAA TERM 4363 4433897 - 4433925 + T 100 -14.7 -3.28745 | opp_overlap 4433891, overlap 4433893 4433892 GCGAGTGAACCGCAA GTGATGACAGTCT CAA AGTCTGTCATCAC TTACCTTCTTGGAAA Ssed_3639 4435448 - 4434162 - | beta-lactamase domain-containing protein Ssed_3640 4436359 - 4435448 - | hypothetical protein Ssed_3641 4437015 - 4436362 - | metallophosphoesterase Ssed_3642 4437392 - 4438018 + | hypothetical protein TERM 4364 4438112 - 4438145 + T 82 -11.1 -3.57263 | opp_overlap 4438108 4438112, overlap 4438113 GACTAAGCACAGATA TCCTGGAAGAGTTGG TCCG CTAACTCTTGCAGGG TTTCGCCCTGAGGGT TERM 4365 4438113 - 4438144 + T 83 -12.4 -2.74144 | opp_overlap 4438112 4438108, overlap 4438112 ACTAAGCACAGATAT CCTGGAAGAGTTGG TCCG CTAACTCTTGCAGG GTTTCGCCCTGAGGG Ssed_3643 4438680 - 4438099 - | TetR family transcriptional regulator TERM 4366 4438807 - 4438763 - H 70 -8.2 -3.68435 | gap 1, overlap 4438761 4438787 4438789 TTGTTCAAAATAATA CTTGAATGATCGTTCAA-ATA AGAA TATCTTGAATGAACATTCAAG AATAAGAGGTCGCTA TERM 4367 4438808 - 4438789 - H 70 -8 -3.63464 | overlap 4438763 4438761 4438787 GTTCAAATAAGAATA TCTTGAAT GAAC ATTCAAGA ATAAGAGGTCGCTAT Ssed_3644 4438822 - 4439874 + | putative NADH-dependent flavin oxidoreductase TERM 4368 4439981 - 4440004 + T 100 -14 -5.63517 | opp_overlap 4439981 TGTCTTGAGACAGAA GAGGTTAACC CTAA GGTTAACCTC TTTTTTATTTCACAA TERM 4369 4440004 - 4439981 - T 95 -14 -3.58726 | opp_overlap 4439981 TGTCTTGAGACAGAA GAGGTTAACC CTAA GGTTAACCTC TTTTTTATTTCACAA Ssed_3645 4441381 - 4440035 - | putative glutamate-1-semialdehyde-2,1-aminomutase TERM 4370 4441229 - 4441242 + g 73 -8.1 -4.10161 | AGCATCGGTAATGGT GCAGC CCTG GCTGC TTTTAACGAATACTG TERM 4371 4441583 - 4441568 - R 70 -9 -3.17723 | CTAGCCGGAATCTAA CCTCCA CGGA TGGAGG AAATGTCGAATGATG Ssed_3646 4443080 - 4441836 - | hypothetical protein Ssed_3647 4443521 - 4445563 + | alpha/beta fold family hydrolase Ssed_3648 4446123 - 4445692 - | hypothetical protein Ssed_3649 4447106 - 4446255 - | hypothetical protein TERM 4372 4446814 - 4446851 + g 83 -4.1 -5.49729 | gap 1 ACTTTAGGATCTATG CTGGAAAATGCC-GCGGT GAC ACCATAGGCATTCACCAG TTTTTTTACCTCCTT Ssed_3650 4447919 - 4449370 + | hypothetical protein TERM 4373 4449413 - 4449390 - T 71 -9.6 -2.8012 | opp_overlap 4449390 4449392 4449394, overlap 4449389 4449387 4449392 AAAGCTTGAAAATAC GATAGGTCAG ATAA CTGGCCTATC TATCCTACTTAGTTC TERM 4374 4449390 - 4449413 + T 81 -11.8 -2.8785 | opp_overlap 4449390 4449389 4449387 4449392, overlap 4449392 4449394 AAAGCTTGAAAATAC GATAGGTCAG ATAA CTGGCCTATC TATCCTACTTAGTTC Ssed_3651 4449681 - 4449442 - | hypothetical protein TERM 4375 4449877 - 4449828 - R 83 -7.4 -4.77759 | gap 2, overlap 4449830 AGAAGGTATGAAAAA GGCTTGCCT--CCTCAAACATCCG AAAT CAAATGTTTAAGGATAGGCAAGAC TCAACCCACGATTGC Ssed_3652 4450997 - 4449924 - | hypothetical protein TERM 4376 4451634 - 4451611 - R 100 -13.2 -5.60993 | overlap 4451595 TGGCTGACAAAAAAA GCCAGTCGAC TTAC ATCGACTGGC AAACGGATTTGAGAG Ssed_3653 4453221 - 4451668 - | nitrite reductase (cytochrome; ammonia-forming) TERM 4377 4452146 - 4452160 + g 73 -3.5 -4.99134 | GGATCTGTGCCATCG GCTGT AAAAC GCAGC TTTTTGATTTCAGCT TERM 4378 4452922 - 4452935 + g 76 -2.3 -5.24796 | opp_overlap 4452916 GCCGACAACCGGGTG CCCTG TACG CAGCG TTTTTATTATATCAG TERM 4379 4453518 - 4453490 - H 71 -7.5 -3.94746 | opp_overlap 4453497, overlap 4453508 TGACACCCAATTAAA CGATATGTCGC ACATATA GCGATATATCG CGACCCAGATTGAAA TERM 4380 4453749 - 4453764 + H 72 -4.6 -4.67982 | opp_overlap 4453747 4453749, overlap 4453751 GCTATAGATAAATCA GGGCTG CCTA CAGCAC TTTTCTTAACTCAAC Ssed_3654 4454310 - 4455041 + | uridine phosphorylase TERM 4381 4455176 - 4455193 + T 73 -7 -4.30978 | opp_overlap 4455176 CCGCCTATAAAAAAA CGAACC GCAAGG GGTTCG TTTTAATCACTTCGC TERM 4382 4455193 - 4455176 - T 100 -7 -5.60993 | opp_overlap 4455176 CCGCCTATAAAAAAA CGAACC GCAAGG GGTTCG TTTTAATCACTTCGC TERM 4383 4455253 - 4455234 - T 70 -5.8 -4.34402 | opp_overlap 4455229 GCTCCTACATTAAAA GCATTTTA TTTA TAAAACGC TTCAACCGTCCCTTT Ssed_3655 4455487 - 4455239 - | hypothetical protein Ssed_3656 4456874 - 4455768 - | tripeptidase T Ssed_3657 4457154 - 4457591 + | CMP/dCMP deaminase, zinc-binding TERM 4384 4457756 - 4457780 + F 87 -5 -5.40474 | gap 1, opp_overlap 4457756 4457757, overlap 4457757 GCATAAGAAATGAAA G-GCCGGAG CGAATTAA CTCCGGCTC TTTTTTTGGGGAAGT TERM 4385 4457757 - 4457778 + F 85 -8.7 -4.34482 | opp_overlap 4457757 4457756, overlap 4457756 CATAAGAAATGAAAG GCCGGAG CGAATTAA CTCCGGC TCTTTTTTTGGGGAA TERM 4386 4457778 - 4457757 - f 73 -9.4 -3.13568 | opp_overlap 4457756 4457757, overlap 4457756 CATAAGAAATGAAAG GCCGGAGC GAATTA ACTCCGGC TCTTTTTTTGGGGAA TERM 4387 4460956 - 4460926 - g 80 -7.1 -4.60292 | opp_overlap 4460932 CATAACAATAACAAA TTCATATTTTTCA GAATT TGAAAAATTTGAA GACTGCATATTCCCA Ssed_3658 4458251 - 4461403 + | nucleoside phosphorylase-like protein Ssed_3659 4461513 - 4462556 + | hypothetical protein TERM 4388 4462648 - 4462667 + F 75 -10 -3.09004 | opp_overlap 4462648, overlap 4462645 4462666 ACCAAAGTTACGTAA GTCCCACA CGGA TGTGGGGC TAGTTTTCGGGGTAC TERM 4389 4463312 - 4463272 - f 90 -9.4 -4.4267 | opp_overlap 4463275, overlap 4463276 TTGCAAAACTTAAAA TAAACTTAATTAAAGGTT AAGCG AACATTTAATTAAGCTTA ACTTAACATAAATCA TERM 4390 4463308 - 4463276 - f 84 -8 -4.75954 | opp_overlap 4463275, overlap 4463272 AAAACTTAAAATAAA CTTAATTAAAGGTT AAGCG AACATTTAATTAAG CTTAACTTAACATAA Ssed_3660 4463816 - 4464220 + | hypothetical protein Ssed_3661 4464360 - 4464839 + | cation antiporter TERM 4391 4465050 - 4465060 + G 74 -6.8 -4.43501 | TTATCAGTGTTATCG GCGT ACT ACGC TTTTCTGACTCAGTT Ssed_3662 4464869 - 4465129 + | MnhF/PhaF family monovalent cation/proton antiporter Ssed_3663 4465126 - 4465467 + | multisubunit Na+/H+ antiporter MnhG subunit-like protein Ssed_3664 4465515 - 4466519 + | putative monovalent cation/H+ antiporter subunit B Ssed_3665 4466519 - 4466887 + | NADH-ubiquinone oxidoreductase, chain 4L TERM 4392 4467370 - 4467343 - g 89 -12.8 -3.53091 | gap 1 ATTGCGCTCGGCAAA GATAGACGCGCCC TTT GGGC-CGCCTATC AATACCTGATCATGG Ssed_3666 4466881 - 4468359 + | putative monovalent cation/H+ antiporter subunit D Ssed_3667 4468356 - 4469846 + | NADH dehydrogenase (quinone) TERM 4393 4470169 - 4470156 - g 75 -8.1 -4.28548 | AGCGACTGATGAAAA CACCC ACAA GGGTG CAAACAATCAGACTG Ssed_3668 4469836 - 4470222 + | hypothetical protein TERM 4394 4471235 - 4471215 - g 72 -10.5 -3.0497 | opp_overlap 4471225 AGACCATGCCCAAGA CCACGATAC TCT GTATCGTAG GTGCGGCTTCTATCT Ssed_3669 4470209 - 4471909 + | putative monovalent cation/H+ antiporter subunit D TERM 4395 4471928 - 4471954 + F 100 -11.7 -4.68908 | gap 1, opp_overlap 4471928 AGCTCATCTACTTAA GCGGC-TGCATA TCAC TATGCAAGCCGC TTTGTTTTAAATGGG TERM 4396 4471954 - 4471928 - f 82 -11.7 -3.07935 | gap 1, opp_overlap 4471928 AGCTCATCTACTTAA GCGGC-TGCATA TCAC TATGCAAGCCGC TTTGTTTTAAATGGG Ssed_3670 4472036 - 4472722 + | transposase and inactivated derivatives Ssed_3671 4473114 - 4474556 + | putative signaling protein TERM 4397 4474658 - 4474639 - T 100 -12.2 -5.24531 | opp_overlap 4474639 ATTTCCCATAAAAAA GCGAACCA TCTA TGGTTCGC TTTAATCCATTCGCG TERM 4398 4474639 - 4474658 + T 91 -12.2 -3.794 | opp_overlap 4474639 ATTTCCCATAAAAAA GCGAACCA TCTA TGGTTCGC TTTAATCCATTCGCG Ssed_3672 4475188 - 4474754 - | hypothetical protein TERM 4399 4475128 - 4475114 - G 73 -7 -4.20354 | opp_overlap 4475114 4475118, overlap 4475115 AAGCGAATTCGAAAA CCGGCC ATC GGCCGC TATGGTAATTGGAAG TERM 4400 4475127 - 4475115 - G 73 -10.5 -3.1149 | opp_overlap 4475114 4475118, overlap 4475114 AGCGAATTCGAAAAC CGGCC ATC GGCCG CTATGGTAATTGGAA TERM 4401 4475801 - 4475783 - R 75 -10.3 -3.06501 | opp_overlap 4475786 CATAGGTGGATGCAA GGAGGAC GAGCA GTCCTCC TTGCCCCGTGCAGGG TERM 4402 4475941 - 4475922 - R 100 -12.2 -5.52096 | opp_overlap 4475922 AAAGGTAACAAAAAA GCGAACCA TCTC TGGTTCGC TTTAATCACTTCGCG TERM 4403 4475922 - 4475941 + r 91 -12.2 -3.794 | opp_overlap 4475922 AAAGGTAACAAAAAA GCGAACCA TCTC TGGTTCGC TTTAATCACTTCGCG Ssed_3673 4479004 - 4476116 - | glycine dehydrogenase TERM 4404 4477982 - 4477970 - G 74 -9.1 -3.61946 | overlap 4477968 TACGGCATAGAAAGA GGCCA TGT TGGCC AAAAGCACCTGTGCG TERM 4405 4479143 - 4479113 - R 95 -13.5 -3.44622 | opp_overlap 4479113 4479117, overlap 4479117 GAGCGGTATAACGAA CAAAGCCCCATAT TCAGG ATATGAGGCTTTG TTTTCAATCGGCGAT TERM 4406 4479113 - 4479143 + r 95 -12 -4.18197 | opp_overlap 4479113 4479117, overlap 4479117 GAGCGGTATAACGAA CAAAGCCCCATATT CAG GATATGAGGCTTTG TTTTCAATCGGCGAT TERM 4407 4479117 - 4479139 + r 81 -7 -4.68908 | opp_overlap 4479113 4479117, overlap 4479113 GGTATAACGAACAAA GCCCCATATT CAG GATATGAGGC TTTGTTTTCAATCGG TERM 4408 4479139 - 4479117 - R 85 -8.5 -4.36596 | opp_overlap 4479117 4479113, overlap 4479113 GGTATAACGAACAAA GCCCCATAT TCAGG ATATGAGGC TTTGTTTTCAATCGG Ssed_3674 4479547 - 4479158 - | glycine cleavage system protein H Ssed_3675 4481050 - 4479956 - | glycine cleavage system aminomethyltransferase T TERM 4409 4481259 - 4481276 + r 79 -3.5 -5.47218 | gap 1, overlap 4481261 CAGTCATTACTTTTT CT-CATGT TAA ACATGTAG TTTTTTTACATACCC Ssed_3676 4482578 - 4481364 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 4410 4482145 - 4482163 + g 76 -7.4 -4.37092 | opp_overlap 4482141 4482159 AGCGTTAACCAGGCT TCGCGTTC ACC GAAGGCGA TTTTCTCCAGACGGT Ssed_3677 4483882 - 4482635 - | 2-polyprenyl-6-methoxyphenol 4-hydroxylase Ssed_3678 4484584 - 4484018 - | YecA family protein TERM 4411 4484344 - 4484334 - G 74 -6.8 -4.35524 | opp_overlap 4484334, overlap 4484327 GGGGTAAAGCCAAAA TCGG CAT CCGA TAATCTTGCCAGGGT Ssed_3679 4485166 - 4485474 + | hypothetical protein TERM 4412 4485898 - 4485933 + T 81 -12 -2.91264 | opp_overlap 4485905, overlap 4485905 GACCTTAGGTTGAAA CAGACAAGCCATCACT GAAA AGTGGTGGCTTTTTTG TGTCTGGATAACAGC TERM 4413 4485905 - 4485926 + T 100 -10.9 -5.4251 | opp_overlap 4485905, overlap 4485898 GGTTGAAACAGACAA GCCATCACT GAAA AGTGGTGGC TTTTTTGTGTCTGGA TERM 4414 4485926 - 4485905 - T 73 -8.7 -3.76232 | opp_overlap 4485905 4485898 GGTTGAAACAGACAA GCCATCACT GAAA AGTGGTGGC TTTTTTGTGTCTGGA Ssed_3680 4486199 - 4485951 - | hypothetical protein Ssed_3681 4486393 - 4486199 - | purine nucleoside phosphorylase Ssed_3682 4486909 - 4486493 - | purine nucleoside phosphorylase Ssed_3683 4487017 - 4487679 + | cyclic nucleotide binding protein, putative Ssed_3684 4488179 - 4487787 - | hypothetical protein TERM 4415 4488344 - 4488367 + H 70 -9.6 -2.51089 | opp_overlap 4488331 4488327 4488347 4488348, overlap 4488341 4488347 4488348 GACTTGCCGGACCGA CAACTGTCCG CCAC CGGACACTTG ATGTATATTTACGGT TERM 4416 4488481 - 4488471 - g 77 -6.8 -4.51743 | GCATTATCAAATAAA CTCC AAT GGAG AACAGAGCTGTCCCC Ssed_3685 4488420 - 4489160 + | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase-like protein TERM 4417 4489806 - 4489794 - g 75 -3.4 -5.055 | opp_overlap 4489803, overlap 4489796 4489797 CTAACTGGCAAAAAA TAGG CAAGC CCTA TCCCATAGGTTTTGC TERM 4418 4489803 - 4489815 + G 74 -6.3 -4.33105 | opp_overlap 4489794 4489797 4489796 AAAAAATAGGCAAGC CCTAT CCC ATAGG TTTTGCTCATGATTG Ssed_3686 4489190 - 4489915 + | 5-formyltetrahydrofolate cyclo-ligase Ssed_3687 4489964 - 4490482 + | lipoprotein Ssed_3688 4491134 - 4490466 - | uracil-DNA glycosylase Ssed_3689 4491369 - 4491929 + | pilin, putative TERM 4419 4491994 - 4491972 - f 76 -9.1 -3.75707 | overlap 4491963 4491970 CAAACAGCTAAAAGA GGGTTAGCG TATAT CGCTCACCC GATAATCACTTGCAT Ssed_3690 4492008 - 4492565 + | methylation site containing protein Ssed_3691 4493018 - 4493317 + | hypothetical protein TERM 4420 4493602 - 4493571 - T 70 -8.1 -3.6692 | gap 1, opp_overlap 4493572, overlap 4493569 4493572 TCGTAGCTCAAAATA GTGCCATCGTCAGT AGATA ACTG-CGATGGCAT TTTTGTATCCGGCGT TERM 4421 4493601 - 4493572 - T 80 -11.6 -2.79831 | gap 1, opp_overlap 4493572, overlap 4493571 4493569 CGTAGCTCAAAATAG TGCCATCGTCAGT AGATA ACTG-CGATGGCA TTTTTGTATCCGGCG TERM 4422 4493572 - 4493601 + T 95 -11.6 -4.96848 | gap 1, opp_overlap 4493571 4493569 4493572 CGTAGCTCAAAATAG TGCCATCGTCAGT AGATA ACTG-CGATGGCA TTTTTGTATCCGGCG Ssed_3692 4494309 - 4493653 - | lysine exporter protein (LysE/YggA) TERM 4423 4495017 - 4494996 - g 75 -5.8 -4.52857 | AGCTGGCAGATAAAA CCGGTGAT GTGGGG ATCTCCGG TACCAGTGTGCAAAT TERM 4424 4495252 - 4495235 - g 80 -6.9 -4.72272 | overlap 4495236 4495247 TTTGGCCACGAAAAA GGCGCCT ACAC AGGCGCG ACGAGTCGCCGTAAG TERM 4425 4495251 - 4495236 - g 75 -10.4 -3.43042 | overlap 4495235 4495247 TTGGCCACGAAAAAG GCGCCT ACAC AGGCGC GACGAGTCGCCGTAA Ssed_3693 4494482 - 4495942 + | Fis family transcriptional regulator TERM 4426 4496027 - 4495992 - f 100 -19.2 -3.31144 | GTTTCAGCCCCACAA GTCACGACATATCGCC ACAA AGCGACATGTCGTGAC CCAAAACATTCCAGT TERM 4427 4496717 - 4496740 + G 70 -9.6 -3.26031 | overlap 4496716 TATCGCCTACTTCGT TCCGGCTAGA GAAC TCTACCCGGA TATCTTTACCCTGAA Ssed_3694 4496154 - 4497599 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4428 4497686 - 4497716 + F 78 -11.1 -3.08992 | opp_overlap 4497685 4497684, overlap 4497685 TTGGCAAACACAACT CTCGCTCTCGGGA TCTTC TCCCCTGAGCGAG TCTGTTGGGCTCCAT Ssed_3695 4498134 - 4499738 + | AMP-dependent synthetase and ligase TERM 4429 4499811 - 4499830 + T 79 -9.2 -3.83323 | opp_overlap 4499812, overlap 4499812 TGTAAGTTGATACAT AGGGAGCC AGTT GGCTCCCC TTTACCTTCTATAAC TERM 4430 4499812 - 4499829 + T 83 -12.7 -2.89511 | opp_overlap 4499812, overlap 4499811 GTAAGTTGATACATA GGGAGCC AGTT GGCTCCC CTTTACCTTCTATAA TERM 4431 4499829 - 4499812 - T 84 -12.7 -3.00994 | opp_overlap 4499812 4499811 GTAAGTTGATACATA GGGAGCC AGTT GGCTCCC CTTTACCTTCTATAA Ssed_3696 4500944 - 4499913 - | alpha/beta hydrolase TERM 4432 4500451 - 4500470 + g 81 -7.8 -4.63486 | overlap 4500453 CCACCCATGATGATG CTGGACTC GGGT GAGTCCTG TTTTATTCCGAAAAT TERM 4433 4500453 - 4500468 + g 76 -9 -3.93367 | overlap 4500451 ACCCATGATGATGCT GGACTC GGGT GAGTCC TGTTTTATTCCGAAA TERM 4434 4500645 - 4500627 - G 74 -6.6 -4.4009 | overlap 4500629 GGCCAGCGGATAAAA CTGCTGAC TGT GCCAGCCG GAGCCATGAATTAAA Ssed_3697 4501419 - 4500970 - | hypothetical protein Ssed_3698 4503440 - 4501527 - | lipid ABC transporter ATPase/inner membrane protein TERM 4435 4503478 - 4503494 + H 76 -4.4 -5.05113 | opp_overlap 4503478 AGAGAATATCAAAAC CCGATT ACGAA AGTCGG TTTTGTTTGTATCAA TERM 4436 4503702 - 4503688 - g 73 -5 -4.67011 | AAGTCCACCCAAAAA CCTAGT CAA ACTAAG GAACAGACTAAACTT Ssed_3699 4503622 - 4503948 + | hypothetical protein Ssed_3700 4504927 - 4504052 - | putative cation transporter component TERM 4437 4504214 - 4504228 + g 74 -10 -3.46914 | overlap 4504213 TTCGGCCTCTTCCTC CAAGCG CAT CGCTTG TGTTTCCTGAGTCAT Ssed_3701 4505847 - 4505557 - | hypothetical protein TERM 4438 4505802 - 4505817 + g 85 -2.6 -5.63645 | gap 1, overlap 4505804 GATGCGCAAGGTATA GC-TTTC GTA GAAATGC TTTTTTCTGTTTTGA TERM 4439 4506024 - 4506008 - H 80 -2.2 -5.61689 | AAAATGAATAAAAAA CCAGAA ACGGA TACTGG CACATGCCCCATGAA Ssed_3702 4506028 - 4506714 + | membrane-flanked domain-containing protein Ssed_3703 4506716 - 4508257 + | membrane-flanked domain-containing protein Ssed_3704 4508413 - 4509033 + | hypothetical protein TERM 4440 4509116 - 4509084 - T 100 -15.7 -4.90013 | opp_overlap 4509088 4509091 CAATTTAAGCAAAAA GAGAGAACCCTTACC TTA GGTAGAGGTTCTCTC TCGACTCGATAGCGG Ssed_3705 4510765 - 4509140 - | methyl-accepting chemotaxis sensory transducer TERM 4441 4509381 - 4509391 + g 83 -6.8 -4.87291 | overlap 4509378 TTTAGCGCTTCACCG GCCA TGT TGGC TTTTTCATTGGCATC TERM 4442 4510210 - 4510198 - G 83 -6.3 -4.98436 | opp_overlap 4510205 4510206 4510209, overlap 4510189 4510200 4510209 TCAAGACGATAAAAA TCTTC ATC GAAGA TGAGTAAATCTCATC TERM 4443 4511165 - 4511127 - R 71 -9.8 -2.89564 | gap 1, overlap 4511138 GCTCTACCGGAGATA TCTGCGCTAAAGAGCTG TAGCTC CAG-TCTCTAGCGCAAA AATGAATATCACTTC Ssed_3706 4511605 - 4511174 - | UspA domain-containing protein TERM 4444 4511586 - 4511574 - G 77 -6.3 -4.56597 | opp_overlap 4511573 4511574 GCTGTCTCGGAAAAA TCTGT GGG ACAGA GTATTTGACGAGTAC TERM 4445 4511848 - 4511893 + r 74 -5.3 -4.71828 | gap 1, opp_overlap 4511858 4511861, overlap 4511850 GAACCTAGAGCCGAG GGAG-CAGGAACTAGGTCCTAG AAA CTAGGACCTCGCGCCTGACAGC TTTTATTACTCCACT TERM 4446 4511882 - 4511858 - R 91 -12.9 -3.22298 | opp_overlap 4511850 4511848, overlap 4511861 CCGAGGGAGCAGGAA CTAGGTCCTAG AAA CTAGGACCTCG CGCCTGACAGCTTTT TERM 4447 4511879 - 4511861 - R 90 -13.2 -2.80195 | opp_overlap 4511850 4511848, overlap 4511858 AGGGAGCAGGAACTA GGTCCTAG AAA CTAGGACC TCGCGCCTGACAGCT Ssed_3707 4513116 - 4511899 - | beta-ketoadipyl CoA thiolase TERM 4448 4512619 - 4512642 + g 79 -10.3 -3.67976 | CGTCTGAGGCATCGC CTCGGTGCC ATAATC GGCATCGAG TTTAGGATTGATAAA Ssed_3708 4514509 - 4513118 - | putative glutamate-1-semialdehyde-2,1-aminomutase TERM 4449 4513791 - 4513775 - G 76 -8.7 -4.06562 | overlap 4513776 AAGCGCAACCACAAA CTCCTGC GAG GCAGGAA TAAGCCCGACACGGT TERM 4450 4513901 - 4513859 - G 72 -10.1 -3.05384 | gap 2, overlap 4513861 CTTGTGCTTATCTAA GATGGTGATGGCCCGCTCAAC ATC GTTAAACGGG--ATCACCACC ACATCGTTAAGCGTG TERM 4451 4513902 - 4513861 - G 78 -11.7 -3.08679 | gap 1, overlap 4513859 TGTGCTTATCTAAGA TGGTGATG-GCCCGCTCAAC ATC GTTAAACGGGATCACCACCA CATCGTTAAGCGTGG Ssed_3709 4515326 - 4514616 - | 3-oxoadipate CoA-transferase Ssed_3710 4516033 - 4515323 - | 3-oxoacid CoA-transferase TERM 4452 4516075 - 4516063 - R 76 -9.1 -3.77219 | ATGAGTTAACCTAAA CGCTG CTG CAGCG CATCTGCCAGATCTG Ssed_3711 4517534 - 4516053 - | hypothetical protein Ssed_3712 4518181 - 4519026 + | transcriptional regulator Ssed_3713 4519737 - 4519294 - | UspA domain-containing protein Ssed_3714 4520260 - 4519829 - | universal stress protein Ssed_3715 4520749 - 4520372 - | hypothetical protein TERM 4453 4520933 - 4520948 + H 86 -9 -4.32049 | opp_overlap 4520928 4520929 ATATAAAAACCGCGA CCGACT AATC AGTCGG TTTTGATAACTTATG Ssed_3716 4521134 - 4522564 + | coniferyl aldehyde dehydrogenase Ssed_3717 4522673 - 4523248 + | TetR family transcriptional regulator Ssed_3718 4525131 - 4523761 - | integral membrane sensor signal transduction histidine kinase Ssed_3719 4526649 - 4525150 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 4454 4525716 - 4525659 - G 73 -10 -3.40299 | opp_overlap 4525670 CGATCAGAGGCAGAA TATCGTCGCAGCGGGCATTGAG-TGGCG GTAA CGCCAACTCAAT-CACGTTGAGTCGATA GAAGAGATCCTCACG TERM 4455 4526807 - 4526839 + r 80 -10.7 -3.38329 | opp_overlap 4526807 TAAAACTAACTGAAA GCGAATGAGAATTAA AGA TCATTTCTCATTCGC TTAATATATATATTT TERM 4456 4526839 - 4526807 - R 100 -12.9 -3.8482 | opp_overlap 4526807 TAAAACTAACTGAAA GCGAATGAGAATTAA AGA TCATTTCTCATTCGC TTAATATATATATTT Ssed_3720 4528072 - 4526861 - | hypothetical protein Ssed_3721 4529392 - 4528091 - | hypothetical protein TERM 4457 4529038 - 4529024 - G 77 -4.2 -5.09173 | opp_overlap 4529026 GAATAGCTCAAAAAA GTCTCT GTC AGTGAC GCGAGCATTTTCTAA Ssed_3722 4530195 - 4529404 - | ABC transporter related Ssed_3723 4530597 - 4530304 - | hypothetical protein Ssed_3724 4531870 - 4530608 - | RND family efflux transporter MFP subunit TERM 4458 4532026 - 4532013 - R 71 -6.7 -4.06384 | opp_overlap 4532019 TTTGAACAGTAGAAA GTGTC CGCG GACAC AGAGGAAAAGTGTCC TERM 4459 4532019 - 4532043 + r 70 -8.6 -3.31263 | opp_overlap 4532013 CAGTAGAAAGTGTCC GCGGACAC AGAGGAAAA GTGTCCGC TTATCAGGATAAGGT Ssed_3725 4532704 - 4532225 - | protein of unknown function DUF395, YeeE/YedE Ssed_3726 4533211 - 4532750 - | protein of unknown function DUF395, YeeE/YedE TERM 4460 4533228 - 4533268 + r 81 -11.9 -2.52676 | opp_overlap 4533229 4533234 AAATTCCCCTTTTAA ATTGAAGCATTGACTCCTC AAT GAGGAGTCAATGCTACTGC TCAATTCAACAACTC TERM 4461 4533267 - 4533229 - R 95 -13.2 -3.53343 | opp_overlap 4533228, overlap 4533234 AATTCCCCTTTTAAA TTGAAGCATTGACTCCTC AAT GAGGAGTCAATGCTACTG CTCAATTCAACAACT TERM 4462 4533262 - 4533234 - R 100 -20.5 -3.27525 | opp_overlap 4533228, overlap 4533229 CCCTTTTAAATTGAA GCATTGACTCCTC AAT GAGGAGTCAATGC TACTGCTCAATTCAA Ssed_3727 4534997 - 4533345 - | NADH dehydrogenase TERM 4463 4534335 - 4534317 - G 71 -8.8 -3.67775 | ACCGTTACTCAAGAA GAGCTCCA AGC CGGAGCCC ACCTGTTCGACGCTA TERM 4464 4534537 - 4534519 - G 73 -5.2 -4.51196 | overlap 4534520 4534522 4534532 TCCAAACCGATAAAA CCACCACC GAC AACGGTGG CATGAACCGGCTTTC TERM 4465 4534537 - 4534522 - G 73 -10.4 -3.20462 | overlap 4534519 4534520 4534532 AAACCGATAAAACCA CCACCG ACAA CGGTGG CATGAACCGGCTTTC Ssed_3728 4535691 - 4535308 - | hypothetical protein Ssed_3729 4536729 - 4535845 - | periplasmic binding protein Ssed_3730 4538085 - 4537471 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 4466 4537500 - 4537516 + g 70 -7.9 -3.82551 | overlap 4537498 CGGGCTGGGCTTTGA CGCCTGC ATC GAAGGCG TGTTTTATGGGCTTT Ssed_3731 4539810 - 4538146 - | cobyric acid synthase Ssed_3732 4540551 - 4539952 - | cobalbumin biosynthesis enzyme Ssed_3733 4541321 - 4540548 - | cobalamin 5'-phosphate synthase TERM 4467 4541098 - 4541083 - G 71 -6.8 -4.26076 | CCATCTTCATGAAAA CCACCG GTCA CGATGG CACTGGTGATCATCG TERM 4468 4541144 - 4541123 - G 73 -8.7 -3.82946 | TCATCGCAAATATAA TGGCTACCG ACGC CGGCAACCA GTTAACGGCCAGAGC TERM 4469 4541403 - 4541377 - R 70 -8.8 -3.39327 | overlap 4541384 4541391 CTCCTACATGGAGAA TCTAGAATCTAG AAC CTAGAACCTAGA ACCTCGTAGTCCATC Ssed_3734 4542457 - 4541429 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TERM 4470 4542379 - 4542390 + g 71 -4.4 -4.81863 | ATTCTCCGAGCGCTC CCAA GGGT TTGG TTTTATTGTCGATTT Ssed_3735 4543818 - 4542688 - | transport system permease protein TERM 4471 4543711 - 4543696 - G 77 -10.4 -3.53091 | opp_overlap 4543692 4543697 ATTGGCGGCGCCAAA GCTGGC TGCG GCCAGC AGGGTTATCAGACTC Ssed_3736 4544743 - 4543808 - | ABC transporter-related protein TERM 4472 4544853 - 4544865 + r 71 -6.9 -4.03234 | opp_overlap 4544852 ACTCAAATGAATTAG CCGGT TTT GCCGG TTTATATGAAAAAAC Ssed_3737 4546587 - 4545901 - | phosphoglycerate mutase Ssed_3738 4549584 - 4546732 - | Na+/proline symporter-like protein TERM 4473 4549128 - 4549165 + g 100 -14.2 -4.02534 | opp_overlap 4549130 TCTCATTGGCCGCAA CACCGTCTTCGGTCTC CAGGAC GAGATCGATGGCGGTG TTTATCGCTTTGAGT TERM 4474 4549992 - 4549982 - H 79 -6.8 -4.57569 | opp_overlap 4549982 4549985 TTACGGGCTTAAAAA GTCG ACT CGAC TATCGTGTGAGTCTG Ssed_3739 4550071 - 4553829 + | B12-dependent methionine synthase TERM 4475 4553895 - 4553877 - f 70 -9.6 -2.54098 | overlap 4553874 4553876 GTTTGGAACTAAGAT CGCAGGAT TCC ATCCTGCA CAGGGCAAGGAGGAC TERM 4476 4553991 - 4553972 - f 73 -9.4 -3.23274 | opp_overlap 4553955 4553971 4553975, overlap 4553975 CTTCTGAGAAGCGAA GAATTTCC AACG GGAAATTC ATGTATCCTGCGGCC TERM 4477 4555046 - 4555034 - g 74 -9.1 -3.7347 | opp_overlap 4555032 TTTAATACCGAAGAA GCCAG TAA CTGGC AATTAGGTGGTTTTG Ssed_3740 4554863 - 4555117 + | hypothetical protein TERM 4478 4555104 - 4555094 - T 74 -4.6 -4.98522 | AAGTCGAGAGAAAAA GGAC TAA GCCC TGTCAAAAAATAGAT TERM 4479 4555158 - 4555133 - T 85 -9 -4.15366 | opp_overlap 4555137 ATGTAAATAAGTAAA CTAAGCCGAG CAAAAC CTCGGCTTTG CCAATCAAATTTAGT TERM 4480 4555137 - 4555154 + T 72 -8.4 -3.5764 | opp_overlap 4555133 AAATAAGTAAACTAA GCCGAG CAAAAC CTCGGC TTTGCCAATCAAATT Ssed_3741 4556390 - 4555305 - | FAD-dependent pyridine nucleotide-disulfide oxidoreductase Ssed_3742 4557429 - 4556551 - | putative transcriptional regulator TERM 4481 4556596 - 4556611 + g 80 -4.6 -5.09259 | opp_overlap 4556596 AGCCAACCACATTAA GGCGGG GCCT TTCGCC TTTTGTTTTGCCATC Ssed_3743 4557512 - 4557964 + | hypothetical protein TERM 4482 4557980 - 4558005 + T 100 -16.3 -4.4078 | opp_overlap 4557980 ATCGGAACAAAAAAA TGCCAGTCAGT GTTT ACTGACTGGCA TTTTGCTTAGAGACG TERM 4483 4558005 - 4557980 - T 100 -16.3 -5.80364 | opp_overlap 4557980 ATCGGAACAAAAAAA TGCCAGTCAGT GTTT ACTGACTGGCA TTTTGCTTAGAGACG Ssed_3744 4559768 - 4558047 - | nitrite reductase (cytochrome; ammonia-forming) TERM 4484 4559784 - 4559798 + H 86 -7.2 -5.06585 | CTTACTCTCCTGCAA GTGAAT TTT ATTCAC TTTTTATGTAATTTA Ssed_3745 4560472 - 4560717 + | hypothetical protein Ssed_3746 4563953 - 4561350 - | (protein-PII) uridylyltransferase TERM 4485 4564324 - 4564351 + r 71 -9.8 -2.76263 | opp_overlap 4564333 GTTCCACCCTGCACT GGGCAAGGAGGA CTGC TCGTCCTCGCCC TCCTTGCATCCTCCC Ssed_3747 4565819 - 4564614 - | hypothetical protein TERM 4486 4566369 - 4566359 - R 72 -3.2 -5.09204 | overlap 4566360 4566361 ATACTTCAATAAAAA TCGC CTA ACGA CTCAGATGGAACATC TERM 4487 4566404 - 4566421 + r 72 -9.9 -2.94938 | opp_overlap 4566361 4566360 TCCCCCCGAGCCTTA GCCATCA TCCA TGATGGC TATATAGCATTTTCA Ssed_3748 4567574 - 4566540 - | hypothetical protein TERM 4488 4567768 - 4567754 - R 70 -2.9 -5.02201 | opp_overlap 4567754, overlap 4567745 AAAACATCATAAAAA TGAAT AATTG ATTCA TTAATTTTTATTAAC Ssed_3749 4569512 - 4567794 - | hypothetical protein TERM 4489 4569150 - 4569161 + g 74 -3 -5.13521 | overlap 4569142 AAATTGCTCATCTAT CAAT GATG ATTG TTTTTTAGGTACTTT Ssed_3750 4570470 - 4569523 - | serine protease Ssed_3751 4571113 - 4570685 - | nuclease Ssed_3752 4572054 - 4572347 + | TM2 domain-containing protein TERM 4490 4572348 - 4572363 + F 76 -9 -3.70068 | overlap 4572348 ATTCATAATTATTGA TCCCGA ATAA TCGGGA TTTGGGATTATGCTG TERM 4491 4572645 - 4572667 + F 73 -9.8 -3.25823 | TCTCCCTCTTGGTCG GGTGTGGACG GAA CGTCCACGAC TTAATCTCCAAACGA TERM 4492 4572672 - 4572692 + F 83 -12.7 -2.83271 | opp_overlap 4572672, overlap 4572669 ACGTCCACGACTTAA TCTCCAAAC GAA GTTTGGAGA TCCTTATGCCGCTAG TERM 4493 4572692 - 4572672 - f 85 -12.7 -3.09635 | opp_overlap 4572672 4572669 ACGTCCACGACTTAA TCTCCAAAC GAA GTTTGGAGA TCCTTATGCCGCTAG TERM 4494 4572730 - 4572716 - f 75 -10 -2.94924 | opp_overlap 4572707, overlap 4572715 4572720 CCGCTAGCCACAAAT CCAAGC GTG GCTTGG TTCCAGACAAGCTTC Ssed_3753 4572832 - 4573485 + | putative glutathione S-transferase Ssed_3754 4575812 - 4573569 - | peptidase U32 TERM 4495 4574493 - 4574505 + g 73 -3.3 -4.87291 | opp_overlap 4574490, overlap 4574490 CGAATCATTCAACAG GAAGG CGA CCTGC TTTTTAATTCGGGTC TERM 4496 4574801 - 4574811 + g 73 -2.4 -5.0916 | TTTCGACCACACGCG CGCC GAT GGCA TTTTTCTCTTCAGAA Ssed_3755 4576249 - 4576001 - | hypothetical protein Ssed_3756 4576624 - 4577790 + | peptidase M19, renal dipeptidase Ssed_3757 4578500 - 4577823 - | 2OG-Fe(II) oxygenase family oxidoreductase TERM 4497 4578707 - 4578751 + r 73 -9.4 -3.1314 | gap 1, opp_overlap 4578707 4578708, overlap 4578707 4578750 GAGAGTTCCGCCAAA GCTGAGATCAGGGAGTATCGG GTAA TCGATATTCCCTGC-CTCAGG CTTTGTTAGCCTTTA TERM 4498 4578707 - 4578752 + r 85 -9.2 -4.23104 | opp_overlap 4578707 4578708, overlap 4578707 4578750 GAGAGTTCCGCCAAA G-CTGAGATCAGGGAGTATCGG GTAA TCGATATTCCCTGC-CTCAGGC TTTGTTAGCCTTTAC TERM 4499 4578751 - 4578707 - R 72 -8.7 -3.54129 | gap 1, opp_overlap 4578707 4578707 4578750, overlap 4578708 GAGAGTTCCGCCAAA GCTGAGATCAGGGAGTATCG GGTAAT CGATATTCCCTG-CCTCAGG CTTTGTTAGCCTTTA TERM 4500 4578750 - 4578708 - R 81 -12.2 -2.72263 | gap 1, opp_overlap 4578707 4578707, overlap 4578707 AGAGTTCCGCCAAAG CTGAGATCAGGGAGTATCG GGTAAT CGATATTCCCTG-CCTCAG GCTTTGTTAGCCTTT Ssed_3758 4580028 - 4578775 - | hypothetical protein TERM 4501 4580198 - 4580216 + r 83 -11 -3.6715 | opp_overlap 4580198 ACGGCGCAACAAAAA GGGAAGCG ATA TGCTTCCC TTTCGGATTGCATCA TERM 4502 4580216 - 4580198 - R 93 -10.3 -5.06816 | opp_overlap 4580198 ACGGCGCAACAAAAA GGGAAGC GATAT GCTTCCC TTTCGGATTGCATCA Ssed_3759 4581907 - 4580243 - | methyl-accepting chemotaxis sensory transducer TERM 4503 4582250 - 4582239 - H 73 -5.8 -4.65895 | opp_overlap 4582239 4582238 TGTTTTACTCAAAAA GGCT GCAC AGCC ATATCTTTCGAATCT Ssed_3760 4583252 - 4583989 + | extracellular solute-binding protein Ssed_3761 4583997 - 4584677 + | polar amino acid ABC transporter, inner membrane subunit Ssed_3762 4584670 - 4585395 + | ABC transporter-related protein Ssed_3763 4586237 - 4585578 - | hypothetical protein Ssed_3764 4586964 - 4586599 - | response regulator receiver protein Ssed_3765 4587335 - 4587988 + | hypothetical protein Ssed_3766 4588338 - 4588084 - | hypothetical protein TERM 4504 4588344 - 4588387 + r 100 -14 -4.93696 | opp_overlap 4588358, overlap 4588332 GTGCGCCCATAGGGG CGTCGGTTGAGAGACGTC CGTTAGTA GACGTCTTTCAACAGGCG TTTTTCATGTTTCAG Ssed_3767 4591273 - 4588364 - | sulfite reductase alpha subunit (flavoprotein)-like protein TERM 4505 4590834 - 4590844 + g 71 -6.8 -4.25056 | opp_overlap 4590832 4590834 TCTAACAGAAAATTA TCGG TGA CCGA TTTATTGATAAACTG TERM 4506 4591134 - 4591122 - G 73 -7.7 -3.97406 | TTAAAATTTGAGAAA TGGCT CTT AGCCA TCGTCAGGTAGTCGG Ssed_3768 4591766 - 4591482 - | hypothetical protein Ssed_3769 4593175 - 4591769 - | hypothetical protein TERM 4507 4592631 - 4592641 + g 73 -2.4 -5.08824 | GCGCGTTTGATTTTG GTGG CCG CCTC TTTTTTGGATGCAAA Ssed_3770 4594233 - 4593262 - | hypothetical protein Ssed_3771 4594648 - 4595529 + | pirin domain-containing protein Ssed_3772 4597243 - 4595762 - | hypothetical protein TERM 4508 4598532 - 4598544 + G 73 -10.5 -3.20403 | opp_overlap 4598530, overlap 4598530 CTGCCCGATCCAACC CGGCG TAT CGCCG TCTATTGTGAGTTCG Ssed_3773 4597638 - 4598702 + | beta-lactamase-like protein TERM 4509 4599048 - 4599086 + G 100 -11.9 -4.70879 | gap 1, opp_overlap 4599049 4599054, overlap 4599049 4599054 ATATAACCGCAAACA ACAAAAGGGGCATAAGCT GAAG GGCTT-TGCCCCTTTTGA TTTTTCGGCTTTCAA TERM 4510 4599049 - 4599085 + G 100 -15.4 -3.41804 | gap 1, opp_overlap 4599049 4599054, overlap 4599048 4599054 TATAACCGCAAACAA CAAAAGGGGCATAAGCT GAAG GGCTT-TGCCCCTTTTG ATTTTTCGGCTTTCA TERM 4511 4599085 - 4599049 - g 100 -14.7 -3.97689 | gap 1, opp_overlap 4599049 4599048 4599054, overlap 4599054 TATAACCGCAAACAA CAAAAGGGGCATAAGC TGAAGG GCTT-TGCCCCTTTTG ATTTTTCGGCTTTCA TERM 4512 4599080 - 4599054 - g 88 -8.8 -5.00196 | gap 1, opp_overlap 4599049 4599048 4599054, overlap 4599049 CCGCAAACAACAAAA GGGGCATAAGC TGAAGG GCTT-TGCCCC TTTTGATTTTTCGGC TERM 4513 4599054 - 4599080 + G 100 -9.5 -4.77757 | gap 1, opp_overlap 4599054 4599049, overlap 4599049 4599048 CCGCAAACAACAAAA GGGGCATAAGCT GAAG GGCTT-TGCCCC TTTTGATTTTTCGGC Ssed_3774 4598893 - 4599150 + | hypothetical protein Ssed_3775 4599632 - 4600567 + | hypothetical protein TERM 4514 4600813 - 4600853 + T 86 -11.9 -3.31515 | opp_overlap 4600804 4600806, overlap 4600820 4600843 4600845 AAAACAGATGTAGGG GCTAGATCCTAGGTTCTAG TTC CCAGATTCTAGGTTCTAGC TTCTGGAACCTCTTT TERM 4515 4600845 - 4600863 + T 77 -9.6 -3.5241 | opp_overlap 4600806, overlap 4600820 4600813 4600843 AGTTCCCAGATTCTA GGTTCTAG CTT CTGGAACC TCTTTCTAAGCCATC Ssed_3776 4602152 - 4600869 - | diguanylate cyclase Ssed_3777 4603280 - 4602285 - | hypothetical protein Ssed_3778 4605300 - 4603411 - | response regulator TERM 4516 4603623 - 4603597 - G 72 -11 -2.64099 | overlap 4603596 CCCTTCGAGCATAAT GCTTTCAGTC TTATCGC GACTGAAAGC CCCCTTATAAACCCT TERM 4517 4604164 - 4604183 + g 71 -4.2 -4.79075 | gap 1, overlap 4604158 4604157 CTCCTTAGTTCGCTC CGC-GACTC TTA GTGTCAGCG TTTTATTGAGTTTTT Ssed_3779 4606121 - 4605633 - | hypothetical protein Ssed_3780 4607952 - 4607041 - | hypothetical protein Ssed_3781 4609119 - 4607974 - | hypothetical protein Ssed_3782 4609297 - 4610559 + | hypothetical protein TERM 4518 4610828 - 4610803 - T 79 -8.9 -3.86524 | opp_overlap 4610802, overlap 4610791 4610804 4610815 ACAGCTTGGTATAAA GCGCGGTGACA AGTG CGCCACCGCGA CCTAGTTGTAAATCA TERM 4519 4610827 - 4610804 - T 83 -12.4 -2.91593 | opp_overlap 4610802, overlap 4610803 4610815 CAGCTTGGTATAAAG CGCGGTGACA AGTG CGCCACCGCG ACCTAGTTGTAAATC Ssed_3783 4612504 - 4610864 - | sensory transduction system, regulatory protein TERM 4520 4611086 - 4611071 - G 75 -7.6 -4.18488 | opp_overlap 4611071 4611070 ACTGACGGTAATAAA CTCACT GGTC AGTGAG CTGTTATGGGGAAGA TERM 4521 4612512 - 4612500 - G 88 -2 -5.76949 | opp_overlap 4612500 TACTTTGAAAAAAAA TTCA TACCG TGAA ATTGTATCCATGAAA Ssed_3784 4614315 - 4612666 - | putative sensory transduction system, regulatory protein TERM 4522 4615179 - 4615200 + G 79 -3.6 -5.252 | opp_overlap 4615179 TGAGGAGGCGAAACA GGGGCAAC ACAATG GTCGCTCC TTTTTTGTAAACATG Ssed_3785 4614835 - 4615488 + | dihydropteridine reductase Ssed_3786 4615644 - 4616303 + | heat shock protein DnaJ domain-containing protein TERM 4523 4616606 - 4616616 + G 82 -5.4 -5.08601 | CAGCCTAAGCTTACT GAGT TTT ACTC TTTTTATTGCCATAA Ssed_3787 4616387 - 4617136 + | DsbA oxidoreductase TERM 4524 4617201 - 4617186 - T 89 -10.4 -4.25681 | opp_overlap 4617186 ACTGAATTCAATAAA GGCTCC CGAA GGAGCC TTTTTTATGGGCGAT TERM 4525 4617186 - 4617201 + T 100 -10.4 -5.24531 | opp_overlap 4617186 ACTGAATTCAATAAA GGCTCC CGAA GGAGCC TTTTTTATGGGCGAT Ssed_3788 4618274 - 4617225 - | glycosyltransferase TERM 4526 4617481 - 4617505 + g 73 -4.9 -4.74801 | AGCTGCTCATTGAGC CCATCGACACC ACT GGTGATAATGG TTTTTCCTGCGGTTA TERM 4527 4617778 - 4617765 - G 70 -9.5 -3.17075 | CTTCTGGGAATCGAA GCGCC CATA GGCGC CGAGTACGACAGGCC Ssed_3789 4618887 - 4618351 - | hypothetical protein TERM 4528 4618576 - 4618554 - G 71 -4 -4.67353 | opp_overlap 4618574, overlap 4618555 4618556 CGATCCAGCTAAAAA GTCCACTGCC ACC GGCAATGGGG AGCTTTCCTTTAAAT TERM 4529 4618574 - 4618556 - G 72 -11 -2.63476 | overlap 4618555 4618554 ATCCAGCTAAAAAGT CCACTGCC ACC GGCAATGG GGAGCTTTCCTTTAA Ssed_3790 4619513 - 4618986 - | protoporphyrinogen oxidase TERM 4530 4619687 - 4619715 + r 76 -7.3 -4.21954 | opp_overlap 4619687 GTATAGAAAGAAAAA CGGCCACCTCAGT TAC ACTGAAACGGCCG TTATTTATCTGTTAG TERM 4531 4619715 - 4619687 - R 100 -13.9 -5.42975 | opp_overlap 4619687 GTATAGAAAGAAAAA CGGCCACCTCAGT TAC ACTGAAACGGCCG TTATTTATCTGTTAG Ssed_3791 4621368 - 4619749 - | hypothetical protein TERM 4532 4620446 - 4620431 - G 71 -6.8 -4.18018 | overlap 4620407 4620442 GCTTTCCAGCCAAAA CGGCCT AAAG AGACCG GGTTGGGATCGCCGG Ssed_3792 4622670 - 4621516 - | putative lipoprotein TERM 4533 4621712 - 4621734 + g 74 -9.8 -3.54424 | opp_overlap 4621712 4621709 TCGCTGCCAACACGA GCGGCTAATG TGG CATCGGCCGC TTTAACGAAATCGAC Ssed_3793 4624129 - 4622732 - | hypothetical protein TERM 4534 4623491 - 4623511 + g 71 -7.5 -4.053 | ACTGCGATGACGCAG CACGGTCAG ATA CTGATCGGG TTTATGTAGAATGCT TERM 4535 4623932 - 4623952 + g 71 -3.9 -4.72272 | overlap 4623940 CACTTGGGCCTGCTT CTGCTGC TCTTGCT GCTGCAG TTTTTGCTGCGAGGC Ssed_3794 4625467 - 4624607 - | hypothetical protein TERM 4536 4625258 - 4625248 - G 73 -3.2 -4.88067 | ATGCAGGCACAAAAA CGGA TAC TCCA CCGGGTTTTCCCTCG TERM 4537 4626662 - 4626650 - g 77 -4.1 -5.03314 | overlap 4626652 CCTATTTCCAAAAAA TTGCC GAC AGCAA AGATATTGCCGCGAC Ssed_3795 4625710 - 4626900 + | major facilitator transporter Ssed_3796 4626961 - 4627794 + | hypothetical protein Ssed_3797 4628929 - 4628120 - | uroporphyrin-III C-methyltransferase Ssed_3798 4629600 - 4631144 + | hypothetical protein Ssed_3799 4631286 - 4631633 + | hypothetical protein TERM 4538 4631997 - 4631987 - g 77 -4 -5.06816 | overlap 4631992 ATTGTTCAATAAAAA TTGA ACA TCAA GATGACGATATCGCG Ssed_3800 4631725 - 4632117 + | hypothetical protein Ssed_3801 4632181 - 4632708 + | redoxin domain-containing protein TERM 4539 4632751 - 4632719 - T 100 -14.9 -4.56729 | AGTAAAAGATTAAAA GGCCCTAGGTCCTAG AAC CTAGAGCCTAGAGCC TAGGAACTCTACCCT Ssed_3802 4633614 - 4632760 - | protein of unknown function RIO1 Ssed_3803 4634154 - 4633741 - | hypothetical protein TERM 4540 4634198 - 4634216 + r 95 -14.6 -2.87132 | opp_overlap 4634198, overlap 4634200 ATTAGGCAAAAAAAA GAGCCAGC GAT GCTGGCTC TATCTGAAAGAGGGA TERM 4541 4634216 - 4634198 - R 100 -14.6 -5.82316 | opp_overlap 4634198 4634200 ATTAGGCAAAAAAAA GAGCCAGC GAT GCTGGCTC TATCTGAAAGAGGGA TERM 4542 4634200 - 4634214 + r 81 -11.4 -2.98823 | opp_overlap 4634198, overlap 4634198 TAGGCAAAAAAAAGA GCCAGC GAT GCTGGC TCTATCTGAAAGAGG Ssed_3804 4635987 - 4634239 - | hypothetical protein TERM 4543 4636418 - 4636391 - R 100 -14.3 -3.48276 | opp_overlap 4636382 4636381 4636381 TGTTTGGGTATACAA CCTGAATAGCC ACGCCG GGCTATTCAGG TGTAACGGCTTTTGA TERM 4544 4636604 - 4636584 - R 74 -4.7 -5.00339 | overlap 4636587 4636588 AGGAAGAACTAAAAA CCACTGAGT CCA ACTCAACAG ATGACAGACTCGATA Ssed_3805 4637677 - 4636910 - | phosphoadenosine phosphosulfate reductase Ssed_3806 4639433 - 4637670 - | sulfite reductase subunit beta TERM 4545 4638366 - 4638352 - G 73 -10 -3.36878 | TTGATCCATCCATAA CGATCG CCG CGATCG CCAATCACCACGTCG Ssed_3807 4641276 - 4639501 - | sulfite reductase (NADPH) flavoprotein, alpha chain TERM 4546 4642810 - 4642800 - g 71 -6.8 -4.22678 | GAGATGGAAGAGAAA GGCT ATA AGCC CTCTAAGCTGCTTAA Ssed_3808 4641624 - 4643006 + | hypothetical protein TERM 4547 4643066 - 4643108 + F 86 -12.2 -3.35679 | opp_overlap 4643074 4643076 4643078 4643080, overlap 4643076 CTTTTGGTCGTGGAC TCTACAGATAGAGAGCGATA ATA TATCGCTCTCTATCTAAAAA TTATCCCTCAACGCC TERM 4548 4643100 - 4643074 - f 100 -16.8 -2.89564 | opp_overlap 4643066 4643076, overlap 4643076 4643078 4643080 CGTGGACTCTACAGA TAGAGAGCGATA ATA TATCGCTCTCTA TCTAAAAATTATCCC TERM 4549 4643098 - 4643076 - f 100 -15 -3.00022 | opp_overlap 4643066 4643076, overlap 4643074 4643078 4643080 TGGACTCTACAGATA GAGAGCGATA ATA TATCGCTCTC TATCTAAAAATTATC TERM 4550 4643076 - 4643098 + F 95 -15 -2.90219 | opp_overlap 4643076 4643074 4643078 4643080, overlap 4643066 TGGACTCTACAGATA GAGAGCGATA ATA TATCGCTCTC TATCTAAAAATTATC TERM 4551 4643096 - 4643078 - f 82 -11.8 -3.05498 | opp_overlap 4643076 4643066, overlap 4643076 4643074 4643080 GACTCTACAGATAGA GAGCGATA ATA TATCGCTC TCTATCTAAAAATTA Ssed_3809 4643317 - 4643592 + | hypothetical protein TERM 4552 4643684 - 4643697 + T 100 -8.1 -5.65177 | opp_overlap 4643684 GATGACTATAAAAAA GGAGC CGAT GCTCC TTTTTTTGTGCCTAT TERM 4553 4643697 - 4643684 - T 91 -8.1 -5.32882 | opp_overlap 4643684 GATGACTATAAAAAA GGAGC CGAT GCTCC TTTTTTTGTGCCTAT Ssed_3810 4644217 - 4643738 - | TetR family transcriptional regulator TERM 4554 4644393 - 4644377 - R 75 -7.9 -4.09685 | opp_overlap 4644377 4644379 TCGGATGCGCTAAAA CTCGCCT GTT AGGCGTG TTTTTGGCTGCCTAC TERM 4555 4644377 - 4644393 + r 84 -7.9 -4.67353 | opp_overlap 4644377, overlap 4644379 TCGGATGCGCTAAAA CTCGCCT GTT AGGCGTG TTTTTGGCTGCCTAC TERM 4556 4644379 - 4644391 + r 79 -9.1 -3.95214 | opp_overlap 4644377, overlap 4644377 GGATGCGCTAAAACT CGCCT GTT AGGCG TGTTTTTGGCTGCCT Ssed_3811 4645423 - 4644614 - | hypothetical protein TERM 4557 4645460 - 4645423 - G 75 -11.4 -2.7224 | overlap 4645420 4645457 CCAGATCACATATCA TCGCCTGCTTTGAACC TATGTC GGTCCAAAGCAAGCTA ACACTCAGCGCAAGC Ssed_3812 4646916 - 4645486 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 4558 4645824 - 4645876 + g 79 -11.6 -3.21218 | gap 2, opp_overlap 4645841 TGTCACCTAACTCTC TGGCTTGTTTCAGGTAACTCACATGC CCC GCATGTAAGATATC-GAAAC-AGCCA TTGGTCATCACAACT TERM 4559 4645861 - 4645841 - G 72 -10.5 -3.05384 | opp_overlap 4645824 GCTTGTTTCAGGTAA CTCACATGC CCC GCATGTAAG ATATCGAAACAGCCA Ssed_3813 4647077 - 4648003 + | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase TERM 4560 4648030 - 4648051 + F 100 -15.9 -5.27923 | opp_overlap 4648027 AGGGTTAGAGTATCG GCCCCGGAA TTTA TTCCGGGGC TTTTTTATGACCTTA Ssed_3814 4648375 - 4648629 + | putative YefM protein Ssed_3815 4648622 - 4648885 + | hypothetical protein Ssed_3816 4649851 - 4648937 - | ApbE family lipoprotein Ssed_3817 4651189 - 4649891 - | hypothetical protein TERM 4561 4650612 - 4650588 - G 82 -11.5 -3.28712 | TCTTCGGTGTCATAA TCTCCTCTAAG TGC CATAGAGGAGA ATGCCACGGGTCTGC Ssed_3818 4651395 - 4651180 - | putative lipoprotein TERM 4562 4651277 - 4651312 + g 73 -8.3 -3.92746 | gap 1, overlap 4651280 GCTAAGTCCAGTTTC TCA-CTGTCCAGCGCC ATGTC GGCTCTGGCCAGTTGA TCTTTTTCCCATGGC TERM 4563 4651280 - 4651308 + g 77 -10.2 -3.60925 | overlap 4651277 AAGTCCAGTTTCTCA CTGTCCAGCGCC ATGTC GGCTCTGGCCAG TTGATCTTTTTCCCA Ssed_3819 4651866 - 4651399 - | redoxin domain-containing protein Ssed_3820 4653373 - 4652192 - | flagellar biosynthesis protein, putative TERM 4564 4652233 - 4652253 + g 76 -9.8 -3.64912 | TAATGCCAGCCACAT TGGAGAAG CTAAA CTTCTCCA TTATCTCTGTGGCTC Ssed_3821 4655190 - 4653466 - | potassium/proton antiporter TERM 4565 4654792 - 4654780 - G 73 -5.5 -4.4959 | TTTAAGCAATGAAAA TACGG CTG CCGCA TCAGTAGAGCCCACG Ssed_3822 4655751 - 4658036 + | putative nitric oxide reductase (subunit B) transmembrane protein TERM 4566 4658059 - 4658078 + F 100 -9.2 -5.90231 | overlap 4658061 CTACTTGCTCACTTT TAGGGCCG TTCG CGGCCCTC TTTTTTTGTATTTAT TERM 4567 4658061 - 4658076 + F 95 -11.8 -4.5577 | overlap 4658059 ACTTGCTCACTTTTA GGGCCG TTCG CGGCCC TCTTTTTTTGTATTT TERM 4568 4658121 - 4658109 - f 80 -6.3 -4.7219 | GACAGCAATATAAAA TGTCA ATA TGACA AGCATGCCTCACTCG Ssed_3823 4658242 - 4659795 + | anaerobic nitric oxide reductase transcription regulator Ssed_3824 4659955 - 4661364 + | peptidase M16 domain-containing protein Ssed_3825 4661361 - 4662896 + | peptidase M16 domain-containing protein Ssed_3826 4662914 - 4664134 + | AFG1 family ATPase Ssed_3827 4664317 - 4666404 + | methyl-accepting chemotaxis transducer TERM 4569 4666456 - 4666440 - f 90 -12.3 -3.63569 | opp_overlap 4666440 TTAACCTCCCAATAA GGCTCGA ATT TCGAGCC TTATCACCAGGATTA TERM 4570 4666440 - 4666456 + F 87 -12.3 -3.29461 | opp_overlap 4666440 TTAACCTCCCAATAA GGCTCGA ATT TCGAGCC TTATCACCAGGATTA Ssed_3828 4666581 - 4668821 + | hypothetical protein TERM 4571 4668831 - 4668874 + F 71 -9.6 -2.77522 | gap 1, opp_overlap 4668822 4668833 4668835, overlap 4668830 AAATAACGGTTGAAC CACAGT-ATGGCCCCTAATCC ACA GGAACAGGGGCTATAACTGAG CTTATTCCAACCTAT TERM 4572 4668872 - 4668833 - f 76 -10.8 -2.72558 | gap 1, opp_overlap 4668831 4668830, overlap 4668835 ATAACGGTTGAACCA CAGT-ATGGCCCCTAATCC ACA GGAACAGGGGCTATAACTG AGCTTATTCCAACCT TERM 4573 4669465 - 4669481 + G 73 -5.1 -4.51196 | overlap 4669467 TCAGTGGGAATATTG TTGCCTT GCA AAGGCTA TTTTCTGCCTTTGAG TERM 4574 4669467 - 4669479 + G 70 -7.7 -3.85911 | overlap 4669465 AGTGGGAATATTGTT GCCTT GCA AAGGC TATTTTCTGCCTTTG Ssed_3829 4669032 - 4669823 + | putative ABC transport system permease protein Ssed_3830 4670635 - 4669889 - | extracellular solute-binding protein Ssed_3831 4671334 - 4670885 - | hypothetical protein Ssed_3832 4672251 - 4671487 - | hypothetical protein TERM 4575 4672154 - 4672143 - G 71 -4.4 -4.70659 | GCTTAGACTTAAAAA CTGA GTGT TCAG CTTCCCCCTTAAACT TERM 4576 4672413 - 4672377 - R 100 -15.3 -3.68265 | opp_overlap 4672390, overlap 4672390 AAAGGCAACGCCAAA TTCTTGCCACAAACTGC GAT GCAGTTTGCGACAAGCA AGAAAGATAAACCGC Ssed_3833 4675295 - 4672431 - | (glutamate--ammonia-ligase) adenylyltransferase TERM 4577 4673118 - 4673092 - G 78 -5.1 -4.98522 | opp_overlap 4673092 AACTTGAGATAAAAA TGGCCAACCTC TATCG GACGTTCGCCA TTAGTCTCTGTATTC TERM 4578 4675361 - 4675341 - H 73 -9.9 -3.22298 | opp_overlap 4675345, overlap 4675345 TCGACTTATTATCAA TTAAGACAT ATT ATGTCTTAA CTGTGACTAGCGTGT TERM 4579 4675446 - 4675426 - H 95 -2.7 -6.23545 | overlap 4675443 TTTAAACAAAAAAAA TTACTTT TTATTTC AAAGTAA GGGTTACTATAACCT Ssed_3834 4675521 - 4676480 + | hypothetical protein Ssed_3835 4676494 - 4677393 + | hypothetical protein TERM 4580 4677447 - 4677422 - f 72 -4.7 -4.6955 | opp_overlap 4677424, overlap 4677424 TAGGAACACATAAAA TACGGTTAATC ATTT GATTAGCCGTT TTATTTTATCCGCAA TERM 4581 4677445 - 4677424 - f 71 -7.3 -3.94954 | opp_overlap 4677424, overlap 4677422 GGAACACATAAAATA CGGTTAATC ATTT GATTAGCCG TTTTATTTTATCCGC TERM 4582 4677424 - 4677445 + F 100 -9.5 -5.18371 | opp_overlap 4677422 4677424 GGAACACATAAAATA CGGTTAATC ATTT GATTAGCCG TTTTATTTTATCCGC TERM 4583 4678167 - 4678191 + G 73 -8.6 -3.93262 | AGCTATCGACATCCA GCTGGCTG CCGCCTTAA CAGCCAGC TTTAATCTCTTGGCC Ssed_3836 4677484 - 4679271 + | spermidine synthase Ssed_3837 4679464 - 4679877 + | hypothetical protein Ssed_3838 4679939 - 4680625 + | phage shock protein A, PspA TERM 4584 4680720 - 4680687 - f 79 -9.7 -3.65314 | opp_overlap 4680688, overlap 4680688 4680690 TTCAACGCCTAATAA GTAGCGCTTTTCTTA TCAC TAAGAAAGGCGCTAT TTTCGTCTTAGCGTT TERM 4585 4680688 - 4680719 + F 100 -15.4 -4.43012 | opp_overlap 4680687 4680688 4680690 TCAACGCCTAATAAG TAGCGCTTTTCTTA TCAC TAAGAAAGGCGCTA TTTTCGTCTTAGCGT TERM 4586 4680719 - 4680688 - f 90 -13.2 -2.78867 | opp_overlap 4680688, overlap 4680687 4680690 TCAACGCCTAATAAG TAGCGCTTTTCTTA TCAC TAAGAAAGGCGCTA TTTTCGTCTTAGCGT TERM 4587 4680717 - 4680690 - f 81 -11.4 -2.93817 | opp_overlap 4680688, overlap 4680688 4680687 AACGCCTAATAAGTA GCGCTTTTCTTA TCAC TAAGAAAGGCGC TATTTTCGTCTTAGC Ssed_3839 4680822 - 4681475 + | hypothetical protein TERM 4588 4681480 - 4681513 + F 77 -10.5 -3.32455 | opp_overlap 4681487 4681488, overlap 4681487 4681508 CAGGGAAGTAAACTC TTTAGAACCTAGG TTCTAGCT CCTAGGTTCTAAG TTAGATTTCAATTTT Ssed_3840 4681542 - 4681871 + | hypothetical protein TERM 4589 4682178 - 4682166 - g 71 -2.7 -4.85918 | GAGCAGAGAATAAAA TTGAC TAT ATCAA GCACAACTGGATAGA Ssed_3841 4681943 - 4682749 + | ion transport 2 domain-containing protein TERM 4590 4682826 - 4682851 + T 72 -10.4 -2.56271 | opp_overlap 4682823 4682820 4682819, overlap 4682823 AGGAAAAACTCAGGT GGCGCAGCCA TCAACC TGGCTACGCC CTCTTATCATCGAGC Ssed_3842 4684373 - 4682871 - | adenylate cyclase TERM 4591 4684125 - 4684162 + g 83 -4.8 -5.25699 | gap 1 AGCCACATTGAATTC CGGCCGCGAATG-GATC CCTCC GATCACACTGCCGGCCG TTTTTATTGTCTGCT TERM 4592 4684402 - 4684430 + H 73 -10.3 -2.89447 | overlap 4684399 GCTCTTTTGTCAATG TTAGGAGCGGTGA TGT TCCCCTCTCCTAA TGGTTGTCATTAAAG TERM 4593 4684593 - 4684620 + H 87 -8.3 -4.57569 | opp_overlap 4684592 4684579 ACACAGTTTCAATAC GCGGTCGCTTG GGTTAA CATGCGCCCGC TTTTTCCAACAGTGG Ssed_3843 4684660 - 4685340 + | hypothetical protein TERM 4594 4685516 - 4685530 + G 71 -4.3 -4.81249 | opp_overlap 4685512 4685516, overlap 4685511 CGATTAAACAAGCGA TCATC ATCGC GATGA TTTTTGAATTTGCCG TERM 4595 4686507 - 4686523 + G 75 -10.1 -3.28912 | AGGTGTGGGTATGGC TCGCGGT ATT GCCGCGA TTAATATCGGTGTGG Ssed_3844 4685365 - 4686633 + | phosphate transporter TERM 4596 4686711 - 4686692 - f 91 -13.6 -2.90061 | opp_overlap 4686692, overlap 4686689 ATAGTGAGATAAGGA GGGAAGCC AACA GGCTTCCC TTTTTGATTTCTACC TERM 4597 4686692 - 4686711 + F 100 -13.6 -5.04601 | opp_overlap 4686692 4686689 ATAGTGAGATAAGGA GGGAAGCC AACA GGCTTCCC TTTTTGATTTCTACC TERM 4598 4687409 - 4687398 - g 80 -3 -5.48825 | CAGCATTGAAAAAAA TGAA CGCT TTCA GATGTGGCAGGAGGG Ssed_3845 4686967 - 4687512 + | SH3 domain-containing protein TERM 4599 4687553 - 4687587 + F 88 -10.8 -4.0162 | opp_overlap 4687553 4687559, overlap 4687559 CATGTCATATTATAA GTAAAAGCCAGTGC ACTTAAC GCGCTGGCTTTTTC TTTATCATATACCCA TERM 4600 4687587 - 4687553 - f 79 -10 -3.47078 | opp_overlap 4687553 4687559, overlap 4687559 CATGTCATATTATAA GTAAAAGCCAGTGCAC TTA ACGCGCTGGCTTTTTC TTTATCATATACCCA TERM 4601 4687559 - 4687581 + F 95 -8.4 -5.40464 | opp_overlap 4687553 4687559, overlap 4687553 ATATTATAAGTAAAA GCCAGTGC ACTTAAC GCGCTGGC TTTTTCTTTATCATA TERM 4602 4687581 - 4687559 - f 81 -7.6 -4.51777 | opp_overlap 4687559 4687553, overlap 4687553 ATATTATAAGTAAAA GCCAGTGCAC TTA ACGCGCTGGC TTTTTCTTTATCATA TERM 4603 4687813 - 4687853 + F 90 -8.4 -5.06414 | gap 1, opp_overlap 4687814, overlap 4687814 CAAGCATCTTAATAC ACTTACCGAAGCC-AGACT TCCT AGGCTAGGTTTCGGTAAGA TTTTTCTTCAAGCAA TERM 4604 4687814 - 4687852 + F 89 -11.9 -3.63367 | gap 1, opp_overlap 4687814, overlap 4687813 AAGCATCTTAATACA CTTACCGAAGCC-AGACT TCCT AGGCTAGGTTTCGGTAAG ATTTTTCTTCAAGCA TERM 4605 4687852 - 4687814 - f 73 -9.7 -3.09557 | gap 1, opp_overlap 4687814 4687813 AAGCATCTTAATACA CTTACCGAAGCC-AGACT TCCT AGGCTAGGTTTCGGTAAG ATTTTTCTTCAAGCA TERM 4606 4688668 - 4688650 - g 71 -10.2 -2.83908 | overlap 4688638 AAACCTATGATGAGA GTGTGGCG CCA CGCCCCAC CATCTCCATCAAGCT Ssed_3846 4687890 - 4691084 + | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 4607 4691131 - 4691114 - f 87 -8.4 -4.64598 | opp_overlap 4691114 CAAGCAGTCTAAAAA CCAGGC CATAGT GCCTGG TTTTTTTATCTCCTC TERM 4608 4691114 - 4691131 + F 100 -8.4 -5.74122 | opp_overlap 4691114 CAAGCAGTCTAAAAA CCAGGC CATAGT GCCTGG TTTTTTTATCTCCTC Ssed_3847 4691215 - 4691391 + | hypothetical protein TERM 4609 4691430 - 4691394 - T 91 -12.9 -3.01712 | opp_overlap 4691395 GCGTCTGGGGTAAGA CCCGACGGGGGAGAGAG ACG CTCTCCTCCCGGTCGGT TCATTGGAACACCAC TERM 4610 4691395 - 4691429 + T 100 -16.4 -3.33696 | opp_overlap 4691394 CGTCTGGGGTAAGAC CCGACGGGGGAGAGAG ACG CTCTCCTCCCGGTCGG TTCATTGGAACACCA Ssed_3848 4693272 - 4691458 - | cysteine/glutathione ABC transporter membrane/ATP-binding component Ssed_3849 4695098 - 4693269 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 4611 4695275 - 4695305 + r 89 -11.9 -3.45602 | gap 1, opp_overlap 4695277, overlap 4695277 TCTCTCCCAAAAAAA AAGGCCGGT-GAGC ATCT GCTCGACCGGCCTA TTATGACTATTTGAT TERM 4612 4695303 - 4695277 - R 100 -14.5 -6.06723 | gap 1, opp_overlap 4695275 4695277 TCTCCCAAAAAAAAA GGCCGGT-GAGC ATCT GCTCGACCGGCC TATTATGACTATTTG TERM 4613 4695277 - 4695303 + r 100 -14.5 -3.29251 | gap 1, opp_overlap 4695277, overlap 4695275 TCTCCCAAAAAAAAA GGCCGGT-GAGC ATCT GCTCGACCGGCC TATTATGACTATTTG Ssed_3850 4695698 - 4695351 - | hypothetical protein Ssed_3851 4696231 - 4697772 + | DEAD/DEAH box helicase domain-containing protein TERM 4614 4697857 - 4697840 - T 90 -11.3 -3.9461 | opp_overlap 4697840 CGTTTCGAAGAATAA GCAGAGC AGCC GCTCTGC TTTTTTTTGCCTTCA TERM 4615 4697840 - 4697857 + T 100 -11.3 -5.86332 | opp_overlap 4697840 CGTTTCGAAGAATAA GCAGAGC AGCC GCTCTGC TTTTTTTTGCCTTCA TERM 4616 4698582 - 4698604 + T 79 -9.8 -3.72576 | TCTCCCTCTTGGTCG GGTGTGGACG GTA CGTCCACGAC TTTCATCCAAACAAA TERM 4617 4698693 - 4698672 - T 100 -12.3 -5.71712 | opp_overlap 4698676 TGCCAGACAAAAAAA GGGAGCGAC CTTA ATCGCTCCC TTCAAAGTTGAAACC Ssed_3852 4700102 - 4698726 - | ATP-dependent RNA helicase DbpA Ssed_3853 4701319 - 4700624 - | hypothetical protein TERM 4618 4701610 - 4701627 + r 90 -12.7 -3.68827 | opp_overlap 4701610 AGAAGGCAAAAAAAA GCCCCGA ATGT TCGGGGC TTTCAATAATGAGTC TERM 4619 4701627 - 4701610 - R 100 -12.7 -5.87688 | opp_overlap 4701610 AGAAGGCAAAAAAAA GCCCCGA ATGT TCGGGGC TTTCAATAATGAGTC TERM 4620 4701638 - 4701653 + r 70 -9 -3.24202 | opp_overlap 4701637 4701638 4701640, overlap 4701637 4701634 4701630 GGGGCTTTCAATAAT GAGTCG ATTA CGACTC TATATTAATTTCATC Ssed_3854 4703077 - 4701668 - | major facilitator transporter Ssed_3855 4703582 - 4703893 + | hypothetical protein TERM 4621 4703932 - 4703915 - f 79 -9.9 -3.62275 | ATTTATCAGCCTAAA CTGAGAG CAAA CTCTCAG CAGTCCCCCTAAAAT TERM 4622 4704810 - 4704830 + G 73 -9.8 -3.40191 | overlap 4704823 GATGTTGGTCGCGAG CCGATATC TGCCC GATATCGG TTGGTATCTTATCGC Ssed_3856 4704034 - 4705956 + | methyl-accepting chemotaxis sensory transducer Ssed_3857 4706382 - 4707263 + | AraC family transcriptional regulator TERM 4623 4707656 - 4707644 - f 76 -3.5 -5.32882 | GATGAGTAGAAAAAA TAATA ATC TATTA ATATGATTACGGGAA TERM 4624 4707838 - 4707805 - g 73 -9.6 -3.29511 | opp_overlap 4707814, overlap 4707807 GTTACCGCCGGAGAA TACCGCTCCGGTTG CCAATC CAAACGAAGCGGCA ACCATTGTGGGAACC TERM 4625 4707836 - 4707807 - g 70 -10 -3.21593 | opp_overlap 4707814, overlap 4707805 TACCGCCGGAGAATA CCGCTCCGGTTG CCAATC CAAACGAAGCGG CAACCATTGTGGGAA TERM 4626 4708643 - 4708633 - g 77 -4 -5.14563 | GGGTCCATCAAAAAA TAAC ATT GTTA GGATAGCAGAAGCAC Ssed_3858 4707677 - 4709296 + | hypothetical protein TERM 4627 4709377 - 4709401 + F 100 -17.3 -5.70829 | AATGGTCCAGGGCAA TGCCAGTCACT GAT AGTGACTGGCA TTTTTTTATGGTGTT TERM 4628 4709429 - 4709447 + F 70 -8.8 -3.38316 | GTTATGAAATAATCT GTCGGCTG GCA CAGTCGGC TTCGTTAGCTCCTAG Ssed_3859 4709753 - 4710454 + | hypothetical protein TERM 4629 4710508 - 4710532 + T 72 -10.1 -2.66711 | overlap 4710507 4710514 4710514 GCCAGGTTCCAGGAC CTAGATTCTAG ATT CTAGATTCTAG ATTCTAGATTCTAAA TERM 4630 4710514 - 4710540 + T 80 -11 -3.30124 | overlap 4710514 4710508 4710507 TTCCAGGACCTAGAT TCTAGATTCTAG ATT CTAGATTCTAGA TTCTAAAGCCTCGGA Ssed_3860 4710772 - 4710572 - | hypothetical protein TERM 4631 4710602 - 4710620 + g 85 -10.3 -4.26076 | GCCTATCACATCGCC GGTGGCT TTCTT AGCCACC TTTTCATCGGGCTGC TERM 4632 4710864 - 4710834 - H 73 -5.4 -4.55295 | opp_overlap 4710841, overlap 4710830 TTTGCCATAAACAAA GAAAAATCGCCGTA TTG TTCGGCACTTTTCC CCTGTTAGTAACGCA TERM 4633 4712645 - 4712628 - g 73 -5.5 -4.57073 | overlap 4712631 GAGTTGCGCCAAAAA CTATCGC CGAT GCGAAAG GTTCAGCTCAAGCTC Ssed_3861 4710966 - 4712876 + | ABC transporter-related protein TERM 4634 4712923 - 4712894 - f 90 -13.1 -2.87522 | gap 1, overlap 4712883 CTAACTCAGACTATA GCGATGTTCATATC AGG GATA-GAACATCGC CAAGACAAAAATGCA Ssed_3862 4712955 - 4713392 + | hypothetical protein TERM 4635 4713418 - 4713440 + T 90 -10.6 -4.19746 | opp_overlap 4713418 AAGCGCCCTCTACAA CAGGAGCGAA GGC TTCACTCCTG TTCTTTTGAGCTAGC TERM 4636 4713440 - 4713418 - T 87 -12.8 -3.29043 | opp_overlap 4713418 AAGCGCCCTCTACAA CAGGAGCGAA GGC TTCACTCCTG TTCTTTTGAGCTAGC Ssed_3863 4715046 - 4713451 - | glucose-methanol-choline oxidoreductase TERM 4637 4714375 - 4714398 + g 100 -10.2 -4.62069 | TAACTTTACCACTTT GGCGCGACTC ACCA GGGTCGCTCC TTTTTCAAGTGCCGC Ssed_3864 4715636 - 4715121 - | hypothetical protein TERM 4638 4715262 - 4715251 - G 73 -2.2 -5.03715 | ATCAGGTCTAAAAAA CTGG TACG CCAA TACTCTAACATTGAG Ssed_3865 4715919 - 4716890 + | alpha/beta hydrolase fold Ssed_3866 4716893 - 4717129 + | hypothetical protein Ssed_3867 4717252 - 4718139 + | phosphoribulokinase TERM 4639 4718380 - 4718348 - T 100 -14.9 -3.90744 | CCCTTTCTTAAAGAA GGCCCGAGTTCCTAG AGT CTAGGATCTCGAACC TAACACCTCTCAGTA TERM 4640 4718709 - 4718684 - T 70 -8.3 -3.33815 | opp_overlap 4718684 4718688, overlap 4718670 AGTTCCTTCAATGAA GGTCCGAGG AACTAGAA CCTCGAACC TCGTATCTAGAACCT Ssed_3868 4721857 - 4718723 - | cobalt-zinc-cadmium resistance protein CzcA (cation efflux system protein CzcA) Ssed_3869 4723168 - 4721870 - | cobalt-zinc-cadmium resistance protein (cation efflux system protein) Ssed_3870 4724514 - 4723168 - | Co/Zn/Cd efflux system component TERM 4641 4724242 - 4724254 + g 75 -7.7 -4.19238 | GCCTTGTCTCTCACC TGTGC CCA GCACA TTTTCAACTTCGACA Ssed_3871 4725050 - 4724652 - | hypothetical protein Ssed_3872 4726142 - 4725366 - | Sel1 domain-containing protein TERM 4642 4726314 - 4726302 - H 86 -7.7 -4.89393 | opp_overlap 4726302 CAAAGTCGAGAAAAA GTGTG TTT CACAC TCAGTTTATGACAAA TERM 4643 4726490 - 4726517 + H 75 -10 -3.23899 | opp_overlap 4726495, overlap 4726489 4726495 GAACATTCATTCTTT CTAAACCTAGAT CTCT ATCTAGGTTTTG TTGACTTAATTGACG TERM 4644 4726512 - 4726495 - H 72 -8.5 -3.53811 | opp_overlap 4726489 4726490 4726495 TTCATTCTTTCTAAA CCTAGAT CTCT ATCTAGG TTTTGTTGACTTAAT TERM 4645 4726495 - 4726512 + H 88 -8.5 -4.72631 | opp_overlap 4726495, overlap 4726489 4726490 TTCATTCTTTCTAAA CCTAGAT CTCT ATCTAGG TTTTGTTGACTTAAT Ssed_3873 4726590 - 4727225 + | cAMP-regulatory protein TERM 4646 4727287 - 4727263 - f 100 -12.9 -3.87373 | opp_overlap 4727264, overlap 4727264 GACAGCTTCGATAAA GTGGCCTGAGA TAA TCTCAGGCCAT TTTTTTTGGAGATAA TERM 4647 4727264 - 4727286 + F 100 -16.4 -5.76949 | opp_overlap 4727263 4727264 ACAGCTTCGATAAAG TGGCCTGAGA TAA TCTCAGGCCA TTTTTTTTGGAGATA TERM 4648 4727286 - 4727264 - f 100 -16.4 -2.92102 | opp_overlap 4727264, overlap 4727263 ACAGCTTCGATAAAG TGGCCTGAGA TAA TCTCAGGCCA TTTTTTTTGGAGATA Ssed_3874 4727308 - 4727646 + | hypothetical protein TERM 4649 4728133 - 4728113 - g 77 -8.3 -4.27617 | opp_overlap 4728113 TACACTCGACGAAAA CCAACAATC AGT GATGGTTGG ATCGAATTTATTTGA Ssed_3875 4727694 - 4728368 + | two component transcriptional regulator Ssed_3876 4728365 - 4729690 + | integral membrane sensor signal transduction histidine kinase TERM 4650 4729782 - 4729760 - T 73 -9.8 -3.14344 | opp_overlap 4729760 GACGGTCTTTATTAA GCCAGTTGGA ACT CCCGACTGGC TTTTTTATGTCTGGA TERM 4651 4729760 - 4729782 + T 100 -11.3 -5.4251 | opp_overlap 4729760 GACGGTCTTTATTAA GCCAGTTGG AACTC CCGACTGGC TTTTTTATGTCTGGA TERM 4652 4730064 - 4730085 + T 78 -7.3 -4.45945 | opp_overlap 4730064, overlap 4730059 AACAGACATAAAAAA GCCACAG CACGGAGA CTGTGGC TTTTCATTAATGGCT TERM 4653 4730085 - 4730064 - T 93 -8 -5.46276 | opp_overlap 4730064 4730059 AACAGACATAAAAAA GCCACAGC ACGGAG ACTGTGGC TTTTCATTAATGGCT Ssed_3877 4731959 - 4730169 - | succinate dehydrogenase TERM 4654 4731941 - 4731951 + g 71 -4 -4.74132 | TGGCCAGGCATATAG CTTT TTT AAAG TTTTTCATCACGTCT TERM 4655 4732902 - 4732916 + G 73 -8.6 -3.85698 | GGAGAGGTCGATGTG GTTCTC GCC GAGAAC TTTGTCGCCAGACGC Ssed_3878 4732302 - 4734380 + | histidine kinase TERM 4656 4735708 - 4735692 - g 71 -6.5 -4.14764 | overlap 4735695 CGGCAAATAATCAAA CAGCTGC TGC GCAGATG CTGGGAATAAGTCAA Ssed_3879 4734377 - 4735759 + | two component, sigma54 specific, transcriptional regulator, fis family protein Ssed_3880 4737850 - 4735808 - | Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein TERM 4657 4735868 - 4735885 + g 77 -2.7 -5.31519 | TAATGTCGACCTTAC CTTGATG TCAC CATGAAG TTTTTGTTTAACTAT TERM 4658 4736263 - 4736273 + g 73 -5.4 -4.49556 | GAAGTACAAATTTCT CCTT ATG AAGG TTTGTTTGCTCGACG Ssed_3881 4739082 - 4737847 - | putative aliphatic amidase expression-regulating protein TERM 4659 4737973 - 4737989 + g 73 -7.9 -4.09511 | TCCATCGCTTCGTAC CCGTCCG ATG CGGACCG TTTTCCACAGGTGTT TERM 4660 4738313 - 4738329 + g 74 -10.9 -2.95192 | opp_overlap 4738315, overlap 4738312 4738315 TCGGCAATGCTGAAT GAGACCA CCT TGGTCTC CTTTATCCCATTCAG TERM 4661 4739177 - 4739201 + r 80 -10 -3.72453 | opp_overlap 4739178, overlap 4739178 ATGCAGGCAAAAAAA AGCCCACAGA GTTAA TCTGTGGGCC TTTCCGATTGTTAGT TERM 4662 4739178 - 4739200 + r 91 -13.5 -2.82749 | opp_overlap 4739178, overlap 4739177 TGCAGGCAAAAAAAA GCCCACAGA GTTAA TCTGTGGGC CTTTCCGATTGTTAG TERM 4663 4739200 - 4739178 - R 100 -13.5 -5.81412 | opp_overlap 4739178 4739177 TGCAGGCAAAAAAAA GCCCACAGA GTTAA TCTGTGGGC CTTTCCGATTGTTAG Ssed_3882 4740518 - 4739244 - | sodium:dicarboxylate symporter TERM 4664 4740974 - 4740942 - R 100 -14.2 -5.00616 | TTTTTGGTTAAAAAA GAGCCGTTGATGGG GGAAA CCTATCAACGGCCC TTACAGAACACAAGT Ssed_3883 4742257 - 4741037 - | hypothetical protein Ssed_3884 4742912 - 4742259 - | hypothetical protein Ssed_3885 4746586 - 4742912 - | hypothetical protein TERM 4665 4744410 - 4744421 + g 81 -5.8 -4.93318 | opp_overlap 4744405, overlap 4744405 GCGCCAACCACCTCC TGCC AGTA GGCA TTTTTCTCCATTCTG TERM 4666 4745371 - 4745381 + g 71 -6.8 -4.19238 | GCTGCTTATCTTGAG CCTG ATG CAGG TTTTCCAGTTCCCGG TERM 4667 4746622 - 4746608 - R 77 -10 -3.27408 | overlap 4746606 CCTTATCCAAACAGA GCCTCA ATT TGAGGC CAAAGCAGGCAATAG TERM 4668 4746647 - 4746675 + r 76 -7.4 -4.2679 | gap 1, opp_overlap 4746647, overlap 4746647 CAATAGAGCATCACA G-GCACAGAGCCG GGGG CGGTTCTGCGCAC TTTTCGTCAACCTTC TERM 4669 4746958 - 4746924 - R 88 -7.9 -5.15167 | opp_overlap 4746926 4746929, overlap 4746925 4746926 TATGACTAACAAAAA TCGAAGGTGTGAGTC GCATA AACTCACACCTTCTG TCTCTGATTGTTAGC TERM 4670 4746957 - 4746925 - R 88 -11.4 -3.68016 | opp_overlap 4746926 4746929, overlap 4746924 4746926 ATGACTAACAAAAAT CGAAGGTGTGAGTC GCATA AACTCACACCTTCT GTCTCTGATTGTTAG TERM 4671 4746956 - 4746926 - R 95 -14.9 -2.79725 | opp_overlap 4746926 4746929, overlap 4746925 4746924 TGACTAACAAAAATC GAAGGTGTGAGTC GCATA AACTCACACCTTC TGTCTCTGATTGTTA TERM 4672 4746926 - 4746956 + r 95 -14.2 -3.08176 | opp_overlap 4746926 4746925 4746924, overlap 4746929 TGACTAACAAAAATC GAAGGTGTGAGT CGCATAA ACTCACACCTTC TGTCTCTGATTGTTA TERM 4673 4746929 - 4746953 + r 80 -10.1 -3.66727 | opp_overlap 4746926 4746925 4746924, overlap 4746926 CTAACAAAAATCGAA GGTGTGAGT CGCATAA ACTCACACC TTCTGTCTCTGATTG Ssed_3886 4748348 - 4746969 - | amino acid carrier protein TERM 4674 4748173 - 4748183 + g 71 -8.2 -3.69094 | GAGAGGTCCCCTTTA CCCG TCG CGGG TTTAAATAATAGCTT Ssed_3887 4749964 - 4749263 - | hypothetical protein TERM 4675 4749831 - 4749815 - G 78 -5.1 -4.99568 | overlap 4749818 TAACACCAAAGAAAA TAGCAGG TCT CCTGGTA CACAGAAACGCTTGG TERM 4676 4750826 - 4750811 - g 73 -7.6 -4.07885 | GATGGCTTCGGAAAA CTGCAT GGCT ATGCAG GCGGCCAGGGAGAGC TERM 4677 4751116 - 4751102 - g 70 -2.1 -4.91109 | TCGGCATCACAAAAA GATGT GATGA ACACC GAGCATAAGCAGCTG TERM 4678 4751591 - 4751566 - g 78 -5.4 -4.89519 | overlap 4751583 4751586 ACAAGATAAAATAAA CTTCGGTGAC TTTAAT ATCACCGCAG GTGTGCGCTACGAAG Ssed_3888 4750247 - 4752439 + | TonB-dependent receptor TERM 4679 4752499 - 4752482 - f 79 -6.9 -4.64657 | opp_overlap 4752482 TTAAATCTTTAAAAA GGTGGGC TTCG GCTCACC TTTTTTATTACCAGA TERM 4680 4752482 - 4752499 + F 95 -9.1 -5.4505 | opp_overlap 4752482 TTAAATCTTTAAAAA GGTGGGC TTCG GCTCACC TTTTTTATTACCAGA TERM 4681 4752640 - 4752622 - f 74 -3.8 -5.14965 | opp_overlap 4752622 ATCCTTATCAAAAAA GCAAATGA TAA CCGTTTGC ATTATCAACATCAGT Ssed_3889 4752707 - 4753894 + | phosphate-selective porin O and P TERM 4682 4753911 - 4753933 + F 81 -11.3 -2.94747 | CTAAGCTCGATGTTA TGAGTGCCC TTCAT GGGCGCTCA TCTATACTCAAATAA Ssed_3890 4754050 - 4754619 + | FMN-binding domain-containing protein Ssed_3891 4754705 - 4755550 + | PepSY-associated TM helix domain-containing protein TERM 4683 4755618 - 4755593 - T 95 -4.7 -5.75342 | GTTCCTTAAAAAAAA GAGCACCTACC TGAA GATAAGTTCTC TCTTTAAATAACTAC Ssed_3892 4757573 - 4755639 - | hypothetical protein TERM 4684 4755672 - 4755693 + g 76 -9.5 -3.67102 | opp_overlap 4755676, overlap 4755676 AGCTTCATTCTCGAG CCAAGAGGT CACC ACTTCTTGG TTATCATTTATATGG TERM 4685 4756866 - 4756880 + g 75 -5.6 -4.68424 | overlap 4756868 CGGCACTGTATGCAG GGGCCA CTC TGGCAC TTTTTGAATAGGTTG TERM 4686 4757181 - 4757161 - G 70 -9.7 -3.25073 | overlap 4757159 GCTTCAACATCAATA TGGCGCTGT GTC ACAGCCCCA AAGGGCAGTGAGAAA TERM 4687 4757832 - 4757807 - R 90 -8.4 -4.88736 | opp_overlap 4757807 4757805 GAGCACCTACAAAAA GAGCACCTAT ATGAAG ATAAGTGCTC TCTTTAAAACAGGCT Ssed_3893 4759777 - 4757855 - | hypothetical protein TERM 4688 4760173 - 4760152 - R 84 -10.2 -3.89368 | ACAAAAATACTTAAA GGGCTTGT TATTCG ACAAGCCC TCCCCACTCTTATCC Ssed_3894 4762546 - 4760183 - | peptidoglycan glycosyltransferase Ssed_3895 4765282 - 4762715 - | ATP-dependent helicase HrpB TERM 4689 4763884 - 4763870 - G 74 -9.2 -3.63073 | overlap 4763859 GACACCGGCCAATAA GCAGGC TAA GCCCGC GAGTTCATTTGATCC Ssed_3896 4765585 - 4766259 + | 2'-5' RNA ligase TERM 4690 4766287 - 4766326 + T 100 -15.2 -4.64676 | opp_overlap 4766279 4766293, overlap 4766293 ATCAAAATGCTTACA TTAAAAGAGCCGGTATCT TTTC AGACACCGGCTCTTTTCA TTTTGTTAAGGGTCA TERM 4691 4766320 - 4766293 - T 100 -16.4 -4.3467 | opp_overlap 4766293 4766287, overlap 4766279 ATGCTTACATTAAAA GAGCCGGTATCT TTTC AGACACCGGCTC TTTTCATTTTGTTAA TERM 4692 4766293 - 4766320 + T 100 -14.2 -4.78029 | opp_overlap 4766279 4766293, overlap 4766287 ATGCTTACATTAAAA GAGCCGGTATCT TTTC AGACACCGGCTC TTTTCATTTTGTTAA Ssed_3897 4767657 - 4766380 - | aminopeptidase B TERM 4693 4767846 - 4767823 - H 82 -6 -4.96848 | CTCTCGATAGAAAAA CTTCCACCTT ACTT AAGGAGAAAG ACACATACTCGGACC Ssed_3898 4767917 - 4768687 + | sugar fermentation stimulation protein TERM 4694 4768922 - 4768898 - g 73 -10 -3.31263 | opp_overlap 4768896 ATCGCAGGTGTAGAA CCTTACCAGG AAAAG CCTGGTGAGG AGTATATGAACGCAG Ssed_3899 4768847 - 4769290 + | TraR/DksA family transcriptional regulator TERM 4695 4769317 - 4769335 + F 84 -10.2 -3.96093 | opp_overlap 4769317 TTACTGCATGAGTAA GCGGGGTT TTA GGCCCCGC TTTACTATTCCTCTC TERM 4696 4770174 - 4770195 + G 78 -10.9 -3.38514 | opp_overlap 4770184, overlap 4770169 TGTTAGAGACCAGCT GCAGACAGG AGAG CCTGTTTGC TCTGTTTGGTTTAAC Ssed_3900 4769534 - 4770451 + | glutamyl-tRNA synthetase, class Ic Ssed_3901 4770535 - 4772025 + | polynucleotide adenylyltransferase TERM 4697 4772016 - 4772006 - f 95 -4.6 -5.86061 | opp_overlap 4772015 CTGCATCAAAAAAAA CGAC TAA GCCG GCAGAGTAATGTCGT Ssed_3902 4772025 - 4772528 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase TERM 4698 4772954 - 4772926 - g 91 -11.7 -4.07306 | overlap 4772914 4772912 ACAGGCAATGACAAA TGCCACCGCCTTG ATG CAAGCCGGTGCCA ACATGGTCAAGCTTG Ssed_3903 4772630 - 4773424 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 4699 4773441 - 4773470 + F 73 -8.5 -3.75629 | ACCACGTATACTCGG CCGCTTGTGAACT CCAT GGTTCACTCGCGG TTTGGCTTGAGCGTA Ssed_3904 4773543 - 4774388 + | pantoate--beta-alanine ligase TERM 4700 4774408 - 4774424 + F 73 -10.1 -2.8474 | overlap 4774406 TTCCAGCACTATCGA GGGCACG TTT TGTGCCC TGCTTATCCCTGCAA Ssed_3905 4774692 - 4775213 + | hypothetical protein Ssed_3906 4775358 - 4775762 + | hypothetical protein Ssed_3907 4775787 - 4776152 + | hypothetical protein TERM 4701 4776212 - 4776193 - T 80 -7.8 -4.37527 | TCACAAGTACCAAAA CCCAGGAT TGAA AGCCTGGG ATCCGAAACCTTCTC Ssed_3908 4777017 - 4776241 - | ABC-2 type transporter Ssed_3909 4777973 - 4777014 - | ABC transporter-related protein TERM 4702 4778065 - 4778047 - R 100 -11.7 -4.93365 | opp_overlap 4778047 CTGTATAACGAAAAA CTCCCGC CAGTT GCGGGAG TTAATGATAAAGCGA TERM 4703 4778047 - 4778065 + r 83 -11.7 -3.21099 | opp_overlap 4778047 CTGTATAACGAAAAA CTCCCGC CAGTT GCGGGAG TTAATGATAAAGCGA Ssed_3910 4778617 - 4778087 - | hypoxanthine phosphoribosyltransferase Ssed_3911 4779295 - 4778636 - | aromatic acid decarboxylase TERM 4704 4779331 - 4779319 - R 73 -7.7 -3.84808 | opp_overlap 4779319 4779316 4779327 4779328, overlap 4779327 CTCAATTTACAAGAA CCTAG ATA CTAGG TACTAGGTACTTAAT Ssed_3912 4780797 - 4779334 - | UDP-N-acetylmuramate TERM 4705 4780300 - 4780270 - G 76 -2.5 -5.31275 | gap 1, overlap 4780296 TTCTACCACAAAAAA TGGCGAGT-TACCC AGAC GCGCAGACACGCCA AAGTTTTGCGGTACG TERM 4706 4780872 - 4780886 + H 72 -8.6 -3.46647 | overlap 4780870 GAGGTTTGTTGTAGA CCATAG CTA CTATGG TATTTGCTACCTGCG TERM 4707 4781144 - 4781116 - H 73 -6.8 -4.2243 | gap 1, opp_overlap 4781115 ACAAACAGTCCAAAA GTTAG-CCAGACA TCCA TGTCTGGACTCAC GCTATTGATTCCAAC TERM 4708 4781491 - 4781448 - H 100 -22.8 -3.41878 | opp_overlap 4781450 4781453, overlap 4781450 4781453 TTTGTGAACTTACAA GATAATCCCCAGTTATTGGC GTAG GCCAATAACTGGGGATTATT TACCAATACTTTTTA TERM 4709 4781450 - 4781489 + H 100 -25.4 -3.60431 | opp_overlap 4781448 4781450 4781453, overlap 4781453 TGTGAACTTACAAGA TAATCCCCAGTTATTGGC GTAG GCCAATAACTGGGGATTA TTTACCAATACTTTT TERM 4710 4781489 - 4781450 - H 100 -25.4 -3.281 | opp_overlap 4781450 4781453, overlap 4781448 4781453 TGTGAACTTACAAGA TAATCCCCAGTTATTGGC GTAG GCCAATAACTGGGGATTA TTTACCAATACTTTT TERM 4711 4781453 - 4781486 + H 100 -22.7 -3.9281 | opp_overlap 4781450 4781448 4781453, overlap 4781450 GAACTTACAAGATAA TCCCCAGTTATTGGC GTAG GCCAATAACTGGGGA TTATTTACCAATACT TERM 4712 4781486 - 4781453 - H 100 -22.7 -3.77639 | opp_overlap 4781453 4781450, overlap 4781450 4781448 GAACTTACAAGATAA TCCCCAGTTATTGGC GTAG GCCAATAACTGGGGA TTATTTACCAATACT Ssed_3913 4781546 - 4781836 + | hypothetical protein TERM 4713 4782088 - 4782048 - g 71 -6.4 -4.16842 | gap 1, overlap 4782049 TGCAGCGCCAAGAAA GCGATGTTGGAGCTTATTA TCAA TAACAAG-TCCAACATCAT CATAGTGCAGCACAT TERM 4714 4782087 - 4782049 - g 70 -9.9 -3.09784 | gap 1, overlap 4782048 GCAGCGCCAAGAAAG CGATGTTGGAGCTTATTA TCAA TAACAAG-TCCAACATCA TCATAGTGCAGCACA Ssed_3914 4781901 - 4782548 + | hypothetical protein TERM 4715 4782588 - 4782562 - T 80 -11.1 -3.28791 | opp_overlap 4782557 4782556 4782564 AGTGTTGCCTGATAA CAGTTGAAATA TCTTG TATTTCAACTG TTCCCCTTTCAGCTC Ssed_3915 4783777 - 4782707 - | response regulator receiver modulated metal dependent phosphohydrolase TERM 4716 4784034 - 4783996 - R 100 -14.7 -4.52857 | gap 1, opp_overlap 4783995, overlap 4784001 AGTTTTGAGAGAAAA GCTAACCCGAGGTGAGCT TGAA AGCTCACCTCGGGCT-GT AACGCAATTGTACTC TERM 4717 4784030 - 4784001 - R 100 -22.3 -3.43774 | opp_overlap 4783995, overlap 4783996 TGAGAGAAAAGCTAA CCCGAGGTGAGCT TGAA AGCTCACCTCGGG CTGTAACGCAATTGT Ssed_3916 4785446 - 4784049 - | tryptophanase TERM 4718 4785619 - 4785597 - R 79 -9.8 -3.64609 | CAGAATTAGCTTAAA TGCGGGCTGA TAT CCAGCCTGCA TCGGGCAGGACTAAA Ssed_3917 4786404 - 4785784 - | hypothetical protein TERM 4719 4786018 - 4786028 + g 76 -2.4 -5.28176 | AGCGTTGAGTATACC CGCG ACT CTCG TTTTTTCTAGCTCAA Ssed_3918 4786721 - 4787425 + | hypothetical protein Ssed_3919 4789549 - 4787501 - | cyclic nucleotide-binding protein TERM 4720 4787964 - 4787981 + g 71 -4.7 -4.54047 | CTGGGCCATATTTTA GGCGTAC CATC GAGCGCC TTTTCTATGGCCTCG TERM 4721 4789022 - 4789009 - G 71 -3.1 -4.91429 | overlap 4789014 AAAGGGTAAATAAAA CGATA GCCG TACCG TCATTGAGCAGCGAC Ssed_3920 4789960 - 4790700 + | putative amino acid-binding protein TERM 4722 4791543 - 4791565 + G 78 -11.3 -3.31726 | overlap 4791541 GTATGGTGCTGTCCA TGCCGCCGT AGATG ACGGTGGCA TCTTGTATGGACCCG Ssed_3921 4790860 - 4791756 + | LysR family transcriptional regulator TERM 4723 4791797 - 4791768 - T 81 -12.1 -2.8937 | opp_overlap 4791764 ATAGAGGTGCAGATA CGAGGAGCGGAAC AGTC GCCCAGCTCCTCG AGTCTTATTAACCGT Ssed_3922 4792381 - 4791812 - | hypothetical protein TERM 4724 4792019 - 4792031 + g 79 -3.4 -5.29445 | GATAAACGGCGTGAC TCTG TGTCC CAGA TTTTTGTTATTCACC Ssed_3923 4793759 - 4792386 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_3924 4794513 - 4793770 - | hypothetical protein TERM 4725 4795262 - 4795272 + G 75 -5.4 -4.8048 | opp_overlap 4795262 CACTGCGGGTAAGCA TCGA GTG TCGA TTTTTGATATCAAAA Ssed_3925 4794969 - 4795967 + | WD-40 repeat-containing protein Ssed_3926 4796887 - 4796096 - | prolipoprotein diacylglyceryl transferase TERM 4726 4796580 - 4796566 - G 74 -10 -3.46859 | overlap 4796564 TATGATAATAGAAGA GCGCTA AAA TAGCGC CTAAACCACCACCAT Ssed_3927 4797652 - 4797122 - | acetyltransferase TERM 4727 4797539 - 4797524 - G 71 -4.6 -4.4891 | overlap 4797525 GTCAGCATGAGAAAA GGGGGT AACA AACCCC ACCGATGCGCCGCTA TERM 4728 4797919 - 4797896 - R 100 -8.1 -5.71712 | GCTGACATAAAAAAA CACCCCGCC ACTGAG GACGAGGTG TAGACTTCAAACTTA Ssed_3928 4799336 - 4798053 - | (S)-3-amino-2-methylpropionate transaminase TERM 4729 4799042 - 4799063 + g 80 -7.1 -4.58283 | overlap 4799046 CTTTCTTTTCGCTAT CACCCGGCG CGAT CGCCGTGAG TTTTTCGGCCAATTC Ssed_3929 4800935 - 4799466 - | succinic semialdehyde dehydrogenase Ssed_3930 4801077 - 4802021 + | LysR family transcriptional regulator Ssed_3931 4802706 - 4802065 - | amino acid transporter LysE Ssed_3932 4803688 - 4802900 - | amino acid ABC transporter periplasmic protein Ssed_3933 4804376 - 4803828 - | hypothetical protein TERM 4730 4804016 - 4804003 - G 73 -2.4 -5.06414 | CTTGTGTAATAAAAA CTCA AGGTAA TGAG CGCATCGAGGTTATC Ssed_3934 4804723 - 4806096 + | Na+/H+ antiporter NhaC TERM 4731 4806318 - 4806297 - f 79 -10.1 -3.56821 | opp_overlap 4806297 ATGAGACCCGGTAAA GGAGTGCAG ATCG CTGCGCTCC TTTTTGTTATTCACC TERM 4732 4806297 - 4806318 + F 100 -12.3 -5.29445 | opp_overlap 4806297 ATGAGACCCGGTAAA GGAGTGCAG ATCG CTGCGCTCC TTTTTGTTATTCACC TERM 4733 4806726 - 4806741 + G 74 -9 -3.71848 | opp_overlap 4806725 4806723 CCTCGATGAACACAG GCTGGT ATCC ACCAGC TTCTTAATCGGCACC Ssed_3935 4806355 - 4807047 + | hypothetical protein Ssed_3936 4807155 - 4807940 + | pseudouridine synthase TERM 4734 4807989 - 4807944 - T 70 -9.1 -3.20703 | overlap 4807936 4807934 4807933 4807945 ACAAGGATCTAGGAA CTCGAATCTCGAGCTGCGAAA TCAA TCTCACAACTCGAAATTCGTC GCTAAATGCTAGTGA TERM 4735 4807988 - 4807945 - T 83 -12.6 -2.5194 | overlap 4807936 4807934 4807933 4807944 CAAGGATCTAGGAAC TCGAATCTCGAGCTGCGAAA TCAA TCTCACAACTCGAAATTCGT CGCTAAATGCTAGTG Ssed_3937 4810154 - 4807998 - | hypothetical protein TERM 4736 4810289 - 4810257 - R 100 -8.6 -5.75945 | gap 1, opp_overlap 4810257 ACCGGGCAAAAAAAA GCCGAGTCCG-ATAT TTTC ATATTCGAACTCGAC TTTATCATAAGCGGC Ssed_3938 4811543 - 4810365 - | aromatic amino acid permease Ssed_3939 4812222 - 4812836 + | hypothetical protein TERM 4737 4812886 - 4812855 - T 100 -14.4 -5.1925 | opp_overlap 4812861 TCAGAAGGTAAAAAA CGAGGCCCTAGTTC CTGG GTTCTAGGGCCTCG ACACCTTACCTGTTA Ssed_3940 4814380 - 4812899 - | catalase TERM 4738 4814218 - 4814242 + g 70 -2.1 -4.83615 | overlap 4814219 CCACTCGCTCCGGAA TTCGTTCGC GATTGAA GTGAGCGAG TTTTTCTAACAGATG TERM 4739 4814818 - 4814782 - R 87 -12.4 -3.33833 | opp_overlap 4814787 4814789, overlap 4814784 4814787 AAAGATGAAAGTGAA GATAACCGTCAAGGCC CGCTC GGCCTTGACTGTTATT AAAAGTAAGCTAGTC TERM 4740 4814816 - 4814784 - R 100 -15 -3.22209 | opp_overlap 4814787 4814789, overlap 4814782 4814787 AGATGAAAGTGAAGA TAACCGTCAAGGCC CGCTC GGCCTTGACTGTTA TTAAAAGTAAGCTAG TERM 4741 4814787 - 4814813 + r 90 -12.3 -3.63515 | opp_overlap 4814787 4814784 4814782, overlap 4814789 TGAAAGTGAAGATAA CCGTCAAGGCC CGCTC GGCCTTGACTG TTATTAAAAGTAAGC TERM 4742 4814813 - 4814787 - R 90 -12.3 -3.73873 | opp_overlap 4814787 4814789, overlap 4814784 4814782 TGAAAGTGAAGATAA CCGTCAAGGCC CGCTC GGCCTTGACTG TTATTAAAAGTAAGC TERM 4743 4814789 - 4814811 + r 95 -13.5 -3.39784 | opp_overlap 4814787 4814784 4814782, overlap 4814787 AAAGTGAAGATAACC GTCAAGGCC CGCTC GGCCTTGAC TGTTATTAAAAGTAA Ssed_3941 4815067 - 4814828 - | hypothetical protein Ssed_3942 4815636 - 4815199 - | hypothetical protein TERM 4744 4816370 - 4816345 - R 100 -13.3 -5.60993 | opp_overlap 4816345 TTGGGCATAAAAAAA CCGCCTTCAGT AGAG ACTGAGGGCGG TTTATAAAGACTAAT TERM 4745 4816345 - 4816370 + r 100 -15.5 -3.87075 | opp_overlap 4816345 TTGGGCATAAAAAAA CCGCCTTCAGT AGAG ACTGAGGGCGG TTTATAAAGACTAAT Ssed_3943 4819052 - 4816395 - | endonuclease/exonuclease/phosphatase TERM 4746 4819013 - 4819034 + g 88 -7.3 -5.11033 | GCAGAGCCGCAGCGA TTGACAGTG CCAG CACTGACAA TTTTTTAACATTATC TERM 4747 4819460 - 4819416 - R 77 -10.9 -2.89683 | opp_overlap 4819420 4819425, overlap 4819425 ATGCTATTTTACAGA GATAAAAAATCCCCAATCAAA ACC TTCGAATGGGGATTTTATTTC CGTATCGGATCGGTC TERM 4748 4819420 - 4819456 + r 70 -8.1 -3.71378 | opp_overlap 4819416 4819425, overlap 4819425 TATTTTACAGAGATA AAAAATCCCCAATCAAA ACC TTCGAATGGGGATTTTA TTTCCGTATCGGATC TERM 4749 4819451 - 4819425 - R 100 -10.2 -5.4492 | opp_overlap 4819420 4819425, overlap 4819416 TACAGAGATAAAAAA TCCCCAATCAAA ACC TTCGAATGGGGA TTTTATTTCCGTATC TERM 4750 4819425 - 4819451 + r 86 -8 -4.92385 | opp_overlap 4819425 4819416, overlap 4819420 TACAGAGATAAAAAA TCCCCAATCAAA ACC TTCGAATGGGGA TTTTATTTCCGTATC Ssed_3944 4822214 - 4819536 - | endonuclease/exonuclease/phosphatase TERM 4751 4820997 - 4821009 + g 73 -4.8 -4.6902 | opp_overlap 4820997 4820995 AAAAGTCGGGAAATA TGGC ACTTC GCCA TTTTTAGCCTTGTAG Ssed_3945 4823583 - 4822918 - | LuxR family transcriptional regulator Ssed_3946 4824494 - 4823883 - | hypothetical protein TERM 4752 4825499 - 4825481 - g 91 -13.2 -3.59946 | opp_overlap 4825478 4825476 GCTCGAAGCAGACAA GATTGCCG GTG CGGCAATC GATGTGTTCCCTGTC Ssed_3947 4824711 - 4825946 + | D-3-phosphoglycerate dehydrogenase TERM 4753 4825989 - 4826020 + F 100 -17.4 -4.47183 | opp_overlap 4825989 GTAACAGGACAGATA TGGCGCGCTCAATT GCAA AATTGTGCGCGCCA TTTATTTAAGTAATC TERM 4754 4826020 - 4825989 - f 100 -17.4 -3.05727 | opp_overlap 4825989 GTAACAGGACAGATA TGGCGCGCTCAATT GCAA AATTGTGCGCGCCA TTTATTTAAGTAATC Ssed_3948 4826091 - 4827056 + | glycine cleavage T protein (aminomethyl transferase) TERM 4755 4827171 - 4827145 - f 89 -10.2 -4.15249 | opp_overlap 4827146, overlap 4827146 AAAGAGTAAATGAAA GGCGCACTAAAT CAA ACTTAGTGCGCT TTTTTTTATCCCACT TERM 4756 4827170 - 4827146 - f 93 -13.7 -3.07523 | opp_overlap 4827146, overlap 4827145 AAGAGTAAATGAAAG GCGCACTAAAT CAA ACTTAGTGCGC TTTTTTTTATCCCAC TERM 4757 4827146 - 4827170 + F 100 -11.5 -5.93809 | opp_overlap 4827146 4827145 AAGAGTAAATGAAAG GCGCACTAAAT CAA ACTTAGTGCGC TTTTTTTTATCCCAC Ssed_3949 4827258 - 4827617 + | DnaK suppressor protein, putative TERM 4758 4828816 - 4828839 + G 71 -8.8 -3.62597 | gap 1, overlap 4828817 GTTGAGATCGTTTTG GCCGGCGTCGC CTT GCGA-GCCGGA TTATTCAACCATCCA TERM 4759 4828817 - 4828838 + G 80 -12.3 -2.77344 | gap 1, overlap 4828816 TTGAGATCGTTTTGG CCGGCGTCGC CTT GCGA-GCCGG ATTATTCAACCATCC Ssed_3950 4827736 - 4828980 + | sodium/hydrogen exchanger TERM 4760 4829097 - 4829114 + T 81 -11.3 -3.05384 | opp_overlap 4829096 TTCGTTTGGATTAAC GTCGTGG AATT CCACGAC TTACCTCGGCCGGAA TERM 4761 4829121 - 4829134 + T 71 -9.5 -2.90723 | TTCCACGACTTACCT CGGCC GGAA GGCCG TATAGTTCAAAGTAA Ssed_3951 4829768 - 4829202 - | Thiol-disulfide isomerase and thioredoxins-like protein Ssed_3952 4830301 - 4829891 - | hypothetical protein Ssed_3953 4830710 - 4831378 + | ABC transporter-related protein TERM 4762 4831546 - 4831519 - g 82 -10.6 -3.95584 | GTGCCACCAACGAAA GTGCCATCGCCA GTTA TAGCGATGTCAC AGAACTGTTGAGTCA TERM 4763 4831792 - 4831774 - g 70 -2.4 -4.83722 | AACATGAGAATAAAA CTAATAGT AAA ACCAATAG CAGTAAATCGAATCA TERM 4764 4832860 - 4832874 + G 70 -10 -3.14051 | overlap 4832858 TCCCGCCACTTTCCC TGGCCA TGA TGGCCA TGTTGCTGGCCCTGA TERM 4765 4833561 - 4833581 + G 74 -4 -4.8622 | gap 1, overlap 4833557 CTGCTTGTCGCCGCC GTTGGC-CT ATTC AGTGCCAGC TTTTTACTTACCCAG Ssed_3954 4831371 - 4833920 + | hypothetical protein Ssed_3955 4833917 - 4835098 + | hypothetical protein TERM 4766 4835374 - 4835390 + F 75 -3 -5.26918 | gap 1, overlap 4835377 ACTCCTAATACCTCT TGTTGGG TATA CCCA-CA TTTTTTATGAGGTCT Ssed_3956 4835499 - 4835753 + | NapD family protein TERM 4767 4835772 - 4835756 - f 70 -5.9 -4.43755 | AGAAGAAAGTTAAAA TAAGTAC CCA GTACCTA AACAAGATTGATTTA Ssed_3957 4835828 - 4838308 + | nitrate reductase Ssed_3958 4838379 - 4839113 + | quinol dehydrogenase periplasmic component Ssed_3959 4839110 - 4840018 + | quinol dehydrogenase membrane component TERM 4768 4840318 - 4840297 - g 71 -6.5 -4.21922 | CCAGCCAAAATGAAA GCGACCCCT ATCG ATGAGTCGC ACCTGTTGGCTACGG Ssed_3960 4840015 - 4840431 + | nitrate reductase cytochrome c-type subunit (NapB) TERM 4769 4840498 - 4840471 - T 90 -11.4 -4.13814 | opp_overlap 4840476, overlap 4840476 AAAAGCTATAAACAA TAAAACCACCTC AATC GAGGTGGTTTTT TATATGTCGTTCAAT TERM 4770 4840493 - 4840476 - T 95 -11.3 -5.05116 | opp_overlap 4840476, overlap 4840471 CTATAAACAATAAAA CCACCTC AATC GAGGTGG TTTTTTATATGTCGT TERM 4771 4840476 - 4840493 + T 100 -11.3 -5.43414 | opp_overlap 4840476 4840471 CTATAAACAATAAAA CCACCTC AATC GAGGTGG TTTTTTATATGTCGT Ssed_3961 4841574 - 4840552 - | diguanylate cyclase TERM 4772 4842753 - 4842739 - g 73 -5.6 -4.52589 | TCGCCTCAGATAAAA CCGGCA CCT TGACGG TCAATGAGATGACCA Ssed_3962 4841853 - 4844441 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Ssed_3963 4845279 - 4844395 - | hypothetical protein TERM 4773 4845368 - 4845357 - H 70 -3 -5.01732 | AATGGTCGTAAAAAA TGAT CGAG ATCA AACCGCTTCCCCGTT Ssed_3964 4845402 - 4846610 + | sodium/hydrogen exchanger Ssed_3965 4846844 - 4847104 + | hypothetical protein TERM 4774 4847131 - 4847171 + T 100 -17.1 -3.07344 | opp_overlap 4847136, overlap 4847136 ATTACAGCCTCTTAA TAAAAGCAGGTAAGCCCCA ACT TGAGTCTTACCTGCTTTTA TCTATTACAGCCTGA TERM 4775 4847136 - 4847166 + T 100 -12.6 -4.67943 | opp_overlap 4847136, overlap 4847131 AGCCTCTTAATAAAA GCAGGTAAGCCCCA ACT TGAGTCTTACCTGC TTTTATCTATTACAG TERM 4776 4847166 - 4847136 - T 100 -14.8 -4.63486 | opp_overlap 4847131 4847136 AGCCTCTTAATAAAA GCAGGTAAGCCCCA ACT TGAGTCTTACCTGC TTTTATCTATTACAG Ssed_3966 4848583 - 4847213 - | alpha-L-glutamate ligase TERM 4777 4848795 - 4848775 - R 100 -9.8 -5.49729 | opp_overlap 4848775 AATCAGGCAAAAAAA TACTCGTC ACAGG GACGAGTA TTTTTACAGTTTACT TERM 4778 4848775 - 4848795 + r 93 -9.8 -4.71482 | opp_overlap 4848775 AATCAGGCAAAAAAA TACTCGTC ACAGG GACGAGTA TTTTTACAGTTTACT Ssed_3967 4853402 - 4848849 - | carbamoyl-phosphate synthase L chain, ATP-binding Ssed_3968 4853524 - 4854435 + | LysR family transcriptional regulator TERM 4779 4854616 - 4854594 - f 95 -15 -2.79183 | opp_overlap 4854596, overlap 4854596 CTGACCTCGATCATA TACCCGAGTA ATT TACTCGGGTA CTATCCCCCTCGAAA TERM 4780 4854614 - 4854596 - f 91 -13.2 -2.94416 | opp_overlap 4854596, overlap 4854594 GACCTCGATCATATA CCCGAGTA ATT TACTCGGG TACTATCCCCCTCGA TERM 4781 4854596 - 4854614 + F 90 -13.2 -2.62983 | opp_overlap 4854596 4854594 GACCTCGATCATATA CCCGAGTA ATT TACTCGGG TACTATCCCCCTCGA TERM 4782 4854801 - 4854819 + F 81 -11.8 -2.86477 | opp_overlap 4854797 4854801, overlap 4854798 TGATGAGCGAATTCA GGTGATGT TAA ACATCACC TCCTTACTCTATTTT TERM 4783 4854819 - 4854801 - f 81 -11.8 -2.55544 | opp_overlap 4854801 4854798, overlap 4854797 TGATGAGCGAATTCA GGTGATGT TAA ACATCACC TCCTTACTCTATTTT Ssed_3969 4855081 - 4856253 + | hypothetical protein Ssed_3970 4856335 - 4856910 + | protein of unknown function DUF335, SprT TERM 4784 4857076 - 4857062 - f 73 -5.6 -4.55625 | opp_overlap 4857064, overlap 4857064 ATCAATATGATAAAA CAGCGC TTA GCGCTT AATAATTTGGCGCCA TERM 4785 4857074 - 4857064 - f 73 -8.2 -3.87977 | opp_overlap 4857064, overlap 4857062 CAATATGATAAAACA GCGC TTA GCGC TTAATAATTTGGCGC TERM 4786 4857394 - 4857384 - g 80 -8.2 -4.40993 | overlap 4857385 4857386 GAGAAAGCAGCAAAA GCGC GCA GCGC GGATCGAGTGGGAGC Ssed_3971 4857133 - 4857888 + | deoxyribonuclease I Ssed_3972 4857896 - 4858627 + | hypothetical protein TERM 4787 4859594 - 4859571 - g 71 -8.2 -3.74747 | CCAACCTGTATCAAA GAGATCGAAG CCGC CTTCGATGTC GATATCACAGGTATG Ssed_3973 4858698 - 4859648 + | glutathione synthetase Ssed_3974 4859659 - 4861032 + | alkaline phosphatase TERM 4788 4861100 - 4861065 - T 70 -8.3 -3.35798 | gap 1, opp_overlap 4861068, overlap 4861066 AGGTTTCAGCGACAA GCTCAGCTCCCCAACT TACCC AGTTGGGGAGCGGT-C TCTACCGGCCAGACT TERM 4789 4861068 - 4861098 + T 95 -15.5 -2.87132 | opp_overlap 4861066 4861065 TTTCAGCGACAAGCT CAGCTCCCCAACT TACCC AGTTGGGGAGCGG TCTCTACCGGCCAGA Ssed_3975 4863553 - 4861067 - | diguanylate cyclase/phosphodiesterase TERM 4790 4862239 - 4862261 + g 81 -12.8 -2.79023 | opp_overlap 4862233, overlap 4862235 4862241 TCTTCAACAGCTCAT CACCTTGGGT ATG ACCTAAGGTG TCATTGATACGCTTG Ssed_3976 4864739 - 4863558 - | hypothetical protein Ssed_3977 4865136 - 4864723 - | hypothetical protein TERM 4791 4865055 - 4865045 - G 71 -6.8 -4.14739 | opp_overlap 4865044 GCAGGTAGCGGAAAA TCGG TGG CCGA ATCATTCACGATGAC TERM 4792 4865999 - 4865985 - g 74 -10 -3.54488 | opp_overlap 4865985 4865984 4865987, overlap 4865983 CCCTTTTAAACAAGA CAGTGC CAG GCACTG CTTACTCTATGTGAG Ssed_3978 4865578 - 4866609 + | rRNA (guanine-N(2)-)-methyltransferase TERM 4793 4866656 - 4866634 - f 70 -8.4 -3.4214 | overlap 4866632 4866630 ACCTGAATAAACATA GCGGCATTAA ATT TCGATGCCGC TCTACCTCAAATATC Ssed_3979 4866815 - 4868485 + | hypothetical protein TERM 4794 4868528 - 4868491 - f 100 -17.7 -3.93288 | opp_overlap 4868492 4868493, overlap 4868477 4868476 4868494 CCGCAGTTAATTAAA TTACCGCGAGGTGGTGC CCTG GCACCACCTCGCGGCCT TTACGGCTCTCTTTG TERM 4795 4868492 - 4868527 + F 100 -19 -3.6135 | opp_overlap 4868477 4868476 4868491 4868494, overlap 4868493 CGCAGTTAATTAAAT TACCGCGAGGTGGTGC CCTG GCACCACCTCGCGGCC TTTACGGCTCTCTTT TERM 4796 4868493 - 4868526 + F 100 -22.5 -2.76087 | opp_overlap 4868477 4868476 4868491 4868494, overlap 4868492 GCAGTTAATTAAATT ACCGCGAGGTGGTGC CCTG GCACCACCTCGCGGC CTTTACGGCTCTCTT TERM 4797 4868525 - 4868494 - f 100 -26 -3.02881 | opp_overlap 4868493 4868492, overlap 4868477 4868476 4868491 CAGTTAATTAAATTA CCGCGAGGTGGTGC CCTG GCACCACCTCGCGG CCTTTACGGCTCTCT TERM 4798 4868738 - 4868749 + G 81 -5.8 -5.00616 | AAGGCTCTATGGCTG GCTG GCAA CAGC TTTTTTGGGGAGACA Ssed_3980 4868650 - 4869822 + | peptidase M50 TERM 4799 4870501 - 4870512 + G 73 -7.2 -4.18018 | TTTTAATCGCCAAGG CCGG ACAT CCGG TTTTCGATGGCGAGC Ssed_3981 4869972 - 4870934 + | LysR family transcriptional regulator TERM 4800 4870996 - 4870962 - T 100 -12.4 -5.26918 | AGACCTCATAAAAAA TCCTCTATTTATCC TTTGACC GGACAAATAGAGGA TATAGGGTAAAAGGT TERM 4801 4871154 - 4871129 - T 72 -9.1 -3.29739 | TTCAATTCAGACCAA CCTCATTACCA TTAC CGATAATGAGG AGGCCCTATCGTTTA Ssed_3982 4874261 - 4871181 - | molydopterin dinucleotide-binding region TERM 4802 4871494 - 4871532 + g 77 -8.4 -4.15632 | overlap 4871495 TCACCGGATTTCAGG TTATATTTAGCTGCATCA TCC TGATGTAACTGAATATAG TTTGTATCTCCTAAT Ssed_3983 4874982 - 4874266 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_3984 4875888 - 4874992 - | polysulphide reductase, NrfD TERM 4803 4876000 - 4875986 - H 76 -2.1 -5.4756 | AATTTTAATAAAAAA GATTG CACAC CAACC CAAAAACATTAAATA Ssed_3985 4876511 - 4877188 + | hypothetical protein TERM 4804 4877361 - 4877346 - T 95 -6.1 -5.64274 | opp_overlap 4877346 TCAGGCATAAAAAAA CCTGC TCAAAG GCAGG TTCTTATCTCTCAAA TERM 4805 4877369 - 4877382 + T 71 -6.7 -4.08706 | opp_overlap 4877378 AAGGCAGGTTCTTAT CTCTC AAAC GAGAG TTTCTCTAATAAAGA Ssed_3986 4879105 - 4877720 - | phosphatidylserine decarboxylase Ssed_3987 4879347 - 4880498 + | arylsulfatase regulator (Fe-S oxidoreductase) Ssed_3988 4880602 - 4881507 + | putative transcriptional regulator SyrB TERM 4806 4882979 - 4882969 - g 70 -2.4 -4.84359 | overlap 4882970 CGATCTCGATAAAAA CGCC GAT GGCT CATTCGACATCCATC Ssed_3989 4881722 - 4883143 + | hypothetical protein Ssed_3990 4883183 - 4884736 + | sulfatase family protein TERM 4807 4884745 - 4884762 + F 84 -12.7 -3.01134 | opp_overlap 4884740 4884738, overlap 4884742 CAAATAACCATGGCA GGTGCGC TCAA GCGCACC TCATTCTTGATTTAC TERM 4808 4885068 - 4885041 - g 86 -7.7 -5.00196 | CCCCAAATAAGAAAA CCGGCACCG GACTTTTTAT CGATGCCGG ACATGATTTTTCAGT Ssed_3991 4884791 - 4885429 + | hypothetical protein TERM 4809 4885721 - 4885731 + G 71 -6.8 -4.21314 | opp_overlap 4885719 4885721 CTGTTAACCCAAATA GCGT AAG ACGC TTTTCCGCTGTTGTT Ssed_3992 4885570 - 4886670 + | RND efflux system membrane fusion protein TERM 4810 4886698 - 4886710 + G 100 -4.7 -5.7946 | opp_overlap 4886691 4886694 4886698, overlap 4886694 4886699 4886705 4886708 CCGAAAAACAAGGCA GCGGC ATT GCCGG TTTTTTTATTAAAAA TERM 4811 4886699 - 4886709 + G 76 -8.2 -4.06592 | opp_overlap 4886691 4886694 4886698, overlap 4886694 4886698 4886705 4886708 CGAAAAACAAGGCAG CGGC ATT GCCG GTTTTTTTATTAAAA TERM 4812 4887063 - 4887053 - g 71 -8.2 -3.65199 | AATTGGCGACTTAAA GGGG CTT CCCC CCGGCGCGGATAAGC TERM 4813 4888019 - 4888031 + G 71 -9.1 -3.55622 | AGGGGCAACCGTTAT TGCGG TAA CCGCA TTTGCCCCGATTGGC Ssed_3993 4886670 - 4889747 + | AcrB/AcrD/AcrF family metabolite exporter TERM 4814 4889762 - 4889734 - f 74 -6.2 -4.43844 | gap 2, opp_overlap 4889736 4889739, overlap 4889739 CCATGATCCATAAAA TCAA--AGCGCAGT AGT ACTGCGCTAATTGA GTGAGTAGAAAATGA TERM 4815 4889755 - 4889739 - f 100 -12.3 -4.27483 | opp_overlap 4889736 4889739, overlap 4889734 ATCCATAAAATCAAA GCGCAGT AGT ACTGCGC TAATTGAGTGAGTAG TERM 4816 4889739 - 4889755 + F 83 -12.3 -2.75712 | opp_overlap 4889739 4889734, overlap 4889736 ATCCATAAAATCAAA GCGCAGT AGT ACTGCGC TAATTGAGTGAGTAG Ssed_3994 4889774 - 4890889 + | long-chain fatty acid ABC transporter TERM 4817 4890972 - 4890957 - T 100 -6.1 -5.76633 | opp_overlap 4890957 4890956, overlap 4890949 TCAGACATAAAAAAA CCTGC ACAATG GCAGG CCTTTTTACTTGATT TERM 4818 4891401 - 4891379 - T 100 -19.2 -3.91984 | opp_overlap 4891365 4891379 ACAGTTGTCAAAGAA GCGGCGCTCA AAA TGAGCGCCGC TTATGATGACCCTAT TERM 4819 4891379 - 4891401 + T 100 -19.2 -3.41229 | opp_overlap 4891379, overlap 4891365 ACAGTTGTCAAAGAA GCGGCGCTCA AAA TGAGCGCCGC TTATGATGACCCTAT Ssed_3995 4893394 - 4891430 - | hypothetical protein Ssed_3996 4893976 - 4893419 - | hypothetical protein TERM 4820 4894905 - 4894921 + G 76 -9.5 -3.73534 | opp_overlap 4894885 GACAGAGAAGCTTTG TCAACTC GGG GAGTTGA TTCTTCGTCAGCTTG Ssed_3997 4894330 - 4895082 + | hypothetical protein TERM 4821 4895381 - 4895396 + T 79 -9 -3.90425 | opp_overlap 4895381 TCAGGCATAAAAAAA CCTGCT AAAA AGCAGG TTCTTCCTTTCCCTA TERM 4822 4895396 - 4895381 - T 100 -9 -5.64274 | opp_overlap 4895381 TCAGGCATAAAAAAA CCTGCT AAAA AGCAGG TTCTTCCTTTCCCTA Ssed_3998 4896505 - 4895747 - | hypothetical protein TERM 4823 4896634 - 4896647 + H 73 -6.7 -4.19678 | AAGGCTTTTCCAGGG GTGAC TGTT GTCAC TTTATTGCAGTGTAA Ssed_3999 4896767 - 4897369 + | putative disulfide isomerase Ssed_4000 4897378 - 4898016 + | disulfide bond formation protein TERM 4824 4898233 - 4898222 - f 70 -5.8 -4.41047 | opp_overlap 4898222 AGGTTCCAATCAAAA CACC TTCG GGTG TTTAGGTACCATACA Ssed_4001 4898273 - 4900048 + | arylsulfate sulfotransferase TERM 4825 4900068 - 4900083 + F 91 -8.2 -5.27923 | opp_overlap 4900068, overlap 4900081 TAATAAATGTAGTAA GGGGCT TTCG GGCCCC TTTTTTATAGGGTTA Ssed_4002 4900105 - 4900887 + | hypothetical protein TERM 4826 4901062 - 4901047 - f 100 -6.1 -5.76633 | opp_overlap 4901046 4901047, overlap 4901039 TCAGACATAAAAAAA CCTGC ACAATG GCAGG CCTTTTTACTTGATT TERM 4827 4901136 - 4901116 - f 72 -10.5 -2.73124 | opp_overlap 4901116 4901119, overlap 4901115 4901119 CGTCACGCTCGAAAG CAACGGATT TTG AATCCGTCG TGTCTACCAATTCCA TERM 4828 4901133 - 4901119 - f 72 -8.6 -3.51708 | opp_overlap 4901116 4901119, overlap 4901116 4901115 CACGCTCGAAAGCAA CGGATT TTG AATCCG TCGTGTCTACCAATT TERM 4829 4901399 - 4901383 - f 79 -9.4 -3.62535 | opp_overlap 4901389 4901397 CGAAAGAGCATATAA CAGGGG CTTTT CCCCTG GACAAGTTTCAACTT Ssed_4003 4901524 - 4901652 + | hypothetical protein TERM 4830 4901700 - 4901723 + T 88 -8.1 -5.1634 | opp_overlap 4901702, overlap 4901702 TGCTGCTTCTAATGC AATGGGGGC AATGAA GCCCCCATC TTTTTATCTGTTTAT TERM 4831 4901721 - 4901702 - T 79 -10.7 -3.17075 | opp_overlap 4901702 4901700 CTGCTTCTAATGCAA TGGGGGC AATGAA GCCCCCA TCTTTTTATCTGTTT TERM 4832 4901702 - 4901721 + T 90 -10.7 -4.18187 | opp_overlap 4901702, overlap 4901700 CTGCTTCTAATGCAA TGGGGGC AATGAA GCCCCCA TCTTTTTATCTGTTT Ssed_4004 4902427 - 4901816 - | hypothetical protein TERM 4833 4902054 - 4902042 - G 73 -7.7 -4.05788 | opp_overlap 4902041 4902042 TTCGTTGAAAGTAAA CTGCT CAC AGCAG GTTCATTTTGCGGCA TERM 4834 4902112 - 4902101 - G 80 -4.4 -5.24129 | GCCTTGGAGAAAAAA CTCT CTCA AGAG GGCTCTCTCCGTTGG TERM 4835 4903392 - 4903372 - g 70 -7.6 -3.8374 | CTAAAAAAGTCTAAA CAGGAACT TCAGG AGTCCCTG GCTGATAGAGAGCGT Ssed_4005 4902667 - 4904304 + | integral membrane sensor signal transduction histidine kinase TERM 4836 4904323 - 4904295 - T 71 -9.7 -2.75844 | overlap 4904294 CTTTCTACCTGAAAC TTTCAGCTGAC ATTCTCA GCCAGCTGAAA TGCTCAATCAACCTA Ssed_4006 4905565 - 4904336 - | peptidase T TERM 4837 4905711 - 4905682 - R 83 -12.2 -3.17238 | ATACGACAGAGTTAA CAGGCGACGTCA TCTTAC TGACACCGCCTG ACTCTGGTACTAAGG Ssed_4007 4906652 - 4905837 - | UBA/ThiF-type NAD/FAD binding protein Ssed_4008 4907148 - 4908212 + | porin TERM 4838 4908293 - 4908307 + F 100 -12.8 -5.50499 | opp_overlap 4908293 GAATTTTCATAAAAA GCGGCC ATT GGCCGC TTTTTTTCAATATAA TERM 4839 4908307 - 4908293 - f 100 -12.8 -4.8543 | opp_overlap 4908293 GAATTTTCATAAAAA GCGGCC ATT GGCCGC TTTTTTTCAATATAA Ssed_4009 4908815 - 4909843 + | porin TERM 4840 4909845 - 4909857 + T 70 -7.7 -3.75153 | opp_overlap 4909838 4909837 GTTACAACTTCTAAT TTCGC TTC GCGAA TTTAGATTGAAAAAG TERM 4841 4909887 - 4909872 - T 93 -10.4 -4.71061 | opp_overlap 4909872 ATTTAGATTGAAAAA GCGACC TTAT GGTCGC TTTTTTTGTTTTGAA TERM 4842 4909872 - 4909887 + T 100 -10.4 -6.09196 | opp_overlap 4909872 ATTTAGATTGAAAAA GCGACC TTAT GGTCGC TTTTTTTGTTTTGAA TERM 4843 4909929 - 4909947 + T 71 -7.4 -3.79113 | opp_overlap 4909913 4909932, overlap 4909932 AGATTCTAGGACCTA GAAGCTAG GAA CTAGCCTC TTCTTATAAGCCGAT Ssed_4010 4910620 - 4909940 - | thiopurine S-methyltransferase Ssed_4011 4911159 - 4910815 - | hypothetical protein Ssed_4012 4911460 - 4913280 + | serine/threonine protein kinase TERM 4844 4913275 - 4913304 + T 80 -4.3 -5.23765 | gap 1, opp_overlap 4913258 4913273 4913271 4913270, overlap 4913273 4913284 AATCCGAAAATCAGT TCCTAGAGCCCTAG GTA CTAGTTC-CTAGGA TTTTTATCTTCTTTA Ssed_4013 4913867 - 4913292 - | FxsA cytoplasmic membrane protein TERM 4845 4913637 - 4913618 - G 75 -10.6 -3.29325 | overlap 4913616 CTGGGATAAGTAACA GCAGGCCG GCAA CGGCCAGC ATCATCCCTTCGACA TERM 4846 4913910 - 4913892 - H 77 -10.4 -3.43553 | ACAACGACTAACCAA TGAGCAAA CTA TTTGCTCA ATATGAAAACTATTT TERM 4847 4914131 - 4914146 + H 71 -6 -4.13995 | GGGTAGTTTACCGAT GCCGGC TTAA GCCAGC TTTAATTTATCAGAC TERM 4848 4914373 - 4914345 - g 73 -10.4 -3.19442 | AGTGAAGAGAGTGAA TTTGCCCTGCAT ATCAA ATGCATGGCAAA GAACTATCCTGCCCT Ssed_4014 4914165 - 4914503 + | CutA1 divalent ion tolerance protein TERM 4849 4916031 - 4916009 - g 80 -9 -4.18018 | opp_overlap 4916027 GTCGCCGACCTAAAA GCGGAGGTCG AAG CGGCCTCGGC TCAGGGCAAGCCGGT Ssed_4015 4914500 - 4916335 + | thiol:disulfide interchange protein precursor TERM 4850 4916347 - 4916333 - f 72 -3.6 -5.11613 | overlap 4916345 ATATTACTGAAAAAA TAAGCT GCA AACTTA AACGCCAGCTTAAAC TERM 4851 4916403 - 4916370 - f 100 -21.3 -3.77832 | opp_overlap 4916370, overlap 4916373 GCTTAAACTCAAGAA TAAGGCCTTCGATTC AACA GAATCGAAGGCCTTA TTTTATCCCGATAGA TERM 4852 4916370 - 4916403 + F 100 -21.3 -4.38712 | opp_overlap 4916370 4916373 GCTTAAACTCAAGAA TAAGGCCTTCGATTC AACA GAATCGAAGGCCTTA TTTTATCCCGATAGA TERM 4853 4916400 - 4916373 - f 100 -18.6 -4.01101 | opp_overlap 4916370, overlap 4916370 TAAACTCAAGAATAA GGCCTTCGATTC AACA GAATCGAAGGCC TTATTTTATCCCGAT Ssed_4016 4916606 - 4918231 + | sodium/hydrogen exchanger TERM 4854 4918314 - 4918264 - f 100 -18.1 -3.66286 | gap 1, opp_overlap 4918268, overlap 4918268 ACATTATCCTAACAA TC-TAGTATTGTATTTCCCATCCT ACGT AAGATGGGAAACACAATACTATGA TAACCCCTACACCAA TERM 4855 4918268 - 4918309 + F 95 -14.7 -2.78816 | opp_overlap 4918264 4918268 TATCCTAACAATCTA GTATTGTATTTCCCATCCT ACGT AAGATGGGAAACACAATAC TATGATAACCCCTAC TERM 4856 4918309 - 4918268 - f 100 -19.1 -2.66106 | opp_overlap 4918268, overlap 4918264 TATCCTAACAATCTA GTATTGTATTTCCCATCCT ACGT AAGATGGGAAACACAATAC TATGATAACCCCTAC Ssed_4017 4918311 - 4919381 + | hypothetical protein TERM 4857 4921454 - 4921440 - g 73 -5.6 -4.56597 | overlap 4921442 4921443 TGGTCGCTGCAAAAA GATGGC ATA GCCGTC GCGAGTGGCAGCGAG Ssed_4018 4919430 - 4922609 + | beta-galactosidase Ssed_4019 4922690 - 4924114 + | SSS family solute/sodium (Na+) symporter Ssed_4020 4924342 - 4925508 + | galactokinase Ssed_4021 4925581 - 4926600 + | aldose 1-epimerase TERM 4858 4926638 - 4926608 - T 100 -18.3 -5.28942 | opp_overlap 4926610, overlap 4926610 CATTTTAAAGAAAAA GAGCCCGGCCCTG AATGA CAGGGCCGGGCTT TGATCTATACCGATT TERM 4859 4926636 - 4926610 - T 100 -20.9 -4.27026 | opp_overlap 4926610, overlap 4926608 TTTTAAAGAAAAAGA GCCCGGCCCTG AATGA CAGGGCCGGGC TTTGATCTATACCGA TERM 4860 4926610 - 4926636 + T 100 -20.9 -3.88498 | opp_overlap 4926610 4926608 TTTTAAAGAAAAAGA GCCCGGCCCTG AATGA CAGGGCCGGGC TTTGATCTATACCGA Ssed_4022 4927113 - 4926658 - | hypothetical protein TERM 4861 4927426 - 4927416 - R 83 -3.2 -5.69023 | AAAAGACTAAAAAAA CACC TCT GATG AACTTATCTTCTAAT Ssed_4023 4928627 - 4927590 - | alcohol dehydrogenase TERM 4862 4927957 - 4927945 - G 83 -9.1 -4.38712 | overlap 4927947 TTCAGGTTGATAAAA TCGCC GCC GGCGA CATCAAATACGACCT TERM 4863 4928772 - 4928753 - R 100 -13.6 -5.93809 | opp_overlap 4928753 CTGGCATAAAAAAAA CACCGCGT AAAT ACGCGGTG TTTATCCAAAACGTC TERM 4864 4928753 - 4928772 + r 100 -13.6 -3.86015 | opp_overlap 4928753 CTGGCATAAAAAAAA CACCGCGT AAAT ACGCGGTG TTTATCCAAAACGTC Ssed_4024 4930662 - 4928800 - | hypothetical protein TERM 4865 4930942 - 4930959 + r 90 -12.7 -3.73386 | opp_overlap 4930942 ATTAGAAATGAAAAA CCCAGCC TAAT GGCTGGG TTTAAATAGTTATCT TERM 4866 4930959 - 4930942 - R 100 -12.7 -5.05505 | opp_overlap 4930942 ATTAGAAATGAAAAA CCCAGCC TAAT GGCTGGG TTTAAATAGTTATCT Ssed_4025 4931694 - 4930999 - | single-strand binding protein Ssed_4026 4933192 - 4931825 - | major facilitator transporter TERM 4867 4933617 - 4933573 - g 81 -10 -4.11216 | opp_overlap 4933574, overlap 4933574 TCGGGATCGGGAAAA TCGTCTCTGGCATTCGATAC TCTCT ATGCCGAAGGCCAGAGACGT TACGTCGAATCACTA TERM 4868 4933616 - 4933574 - g 86 -13.5 -3.06515 | opp_overlap 4933574, overlap 4933573 CGGGATCGGGAAAAT CGTCTCTGGCATTCGATAC TCTCT ATGCCGAAGGCCAGAGACG TTACGTCGAATCACT TERM 4869 4933574 - 4933616 + G 83 -12.8 -3.06915 | opp_overlap 4933574 4933573 CGGGATCGGGAAAAT CGTCTCTGGCATTCGATA CTCTCTA TGCCGAAGGCCAGAGACG TTACGTCGAATCACT Ssed_4027 4933462 - 4936299 + | excinuclease ABC, A subunit TERM 4870 4936324 - 4936354 + F 79 -11.2 -2.6518 | opp_overlap 4936324, overlap 4936323 ACTAACTTGATGAAA TCGGACTCCGGT ATACCCG GCCGGAGTCTGA CTTATACCTATTAGA TERM 4871 4936354 - 4936324 - f 73 -8.3 -3.76759 | opp_overlap 4936324 4936323 ACTAACTTGATGAAA TCGGACTCCGG TATACCCGG CCGGAGTCTGA CTTATACCTATTAGA Ssed_4028 4936532 - 4937593 + | peptidase M28 TERM 4872 4938690 - 4938677 - g 70 -8.1 -3.84915 | opp_overlap 4938676, overlap 4938670 GATATGAATCAACAA GCACG TGAA CGTGC CGTTGATCAACTTAA TERM 4873 4939117 - 4939089 - g 90 -13.9 -3.05765 | AAGTCGATACAGACA TTCTTGCCGCAGC ACT GCTGCAGCAAGTA CAAAAAGATCGTCCA Ssed_4029 4937831 - 4939663 + | DEAD/DEAH box helicase domain-containing protein TERM 4874 4939725 - 4939709 - f 91 -7.9 -5.33405 | opp_overlap 4939710, overlap 4939710 CTGAGTAAATAAAAA GGGAGCC TAA GGCTCCT TTTTTTATGCCTTTA TERM 4875 4939724 - 4939710 - f 88 -11.4 -3.78958 | opp_overlap 4939710, overlap 4939709 TGAGTAAATAAAAAG GGAGCC TAA GGCTCC TTTTTTTATGCCTTT TERM 4876 4939710 - 4939724 + F 100 -11.4 -5.68039 | opp_overlap 4939710 4939709 TGAGTAAATAAAAAG GGAGCC TAA GGCTCC TTTTTTTATGCCTTT Ssed_4030 4939986 - 4940939 + | hypothetical protein Ssed_4031 4941546 - 4941004 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 4877 4942099 - 4942063 - g 77 -8.7 -4.26076 | opp_overlap 4942086, overlap 4942064 4942067 TCATCTCTATTAAAA TTAACCCCAGAAGGACT CAG AGTCCATCGGGAGTTAG CCCCTATGGTTTTAG TERM 4878 4942098 - 4942064 - g 82 -12.2 -3.15324 | opp_overlap 4942086, overlap 4942063 4942067 CATCTCTATTAAAAT TAACCCCAGAAGGACT CAG AGTCCATCGGGAGTTA GCCCCTATGGTTTTA TERM 4879 4942095 - 4942067 - g 76 -9.5 -3.71672 | opp_overlap 4942086, overlap 4942064 4942063 CTCTATTAAAATTAA CCCCAGAAGGACT CAG AGTCCATCGGGAG TTAGCCCCTATGGTT Ssed_4032 4941739 - 4942227 + | transcriptional regulatory protein Ssed_4033 4942653 - 4942231 - | hypothetical protein Ssed_4034 4942997 - 4943404 + | hypothetical protein Ssed_4035 4943828 - 4944661 + | Sel1 domain-containing protein TERM 4880 4944707 - 4944681 - T 95 -13.9 -3.37522 | opp_overlap 4944689 ATCCGATTTAATTAA GTGATAGAGGA GATTT TCCTCTATCAC TCTAACAGCCTTATC Ssed_4036 4945534 - 4944704 - | hypothetical protein Ssed_4037 4945832 - 4945596 - | hypothetical protein TERM 4881 4945847 - 4945861 + r 72 -8.6 -3.56092 | TCTCTTATTTCTTCC TCATCC GCA GGATGA TTTACCCCATCATAC TERM 4882 4945934 - 4945923 - R 73 -5.8 -4.60889 | overlap 4945931 AACTACCTTGAAAAA CACC GAAA GGTG ATCCACCCTCTAAAC Ssed_4038 4946450 - 4946073 - | hypothetical protein TERM 4883 4946727 - 4946705 - R 93 -9.1 -5.19328 | ACGGGATAACAAAAA TGCCCCACC GATAA GGCAGGGCA CTGATTTCAACTCGT Ssed_4039 4947739 - 4946849 - | 5,10-methylenetetrahydrofolate reductase TERM 4884 4947978 - 4947943 - R 81 -7.5 -4.58283 | gap 1 CAAGTTCGGCAAAAA GCG-CCTCCTAGGACG GGCTT CGCCCTGCGAGGACGC ATGAAATAAGGACGC TERM 4885 4948179 - 4948144 - R 77 -6.1 -4.57569 | gap 1, overlap 4948177 CGAGTTCGGCAAAAA GCGCCTCC-TAGGACG GGCTT CGCCCTGCGAAGACGC AGCAAAGCTGCTATG Ssed_4040 4950630 - 4948243 - | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 4886 4949425 - 4949407 - G 70 -9.6 -3.14468 | GGTGACCAGACTCAA GCCGTCAT TGA ATAACGGC CTGGCATCACGACTC Ssed_4041 4951803 - 4950643 - | cystathionine gamma-synthase TERM 4887 4951499 - 4951486 - G 70 -8.1 -3.9243 | TAAGTTGGTAAACAA GCGGT AGCT ACCGC CATAGCAGTCATGGG Ssed_4042 4952037 - 4952351 + | transcriptional repressor protein MetJ TERM 4888 4952376 - 4952398 + F 100 -17.8 -4.41616 | opp_overlap 4952373 TTGTTCAGTCAATTT CAGGGATCGC TAT GCGATCCCTG TTTGTTTCAGCCGCT TERM 4889 4952661 - 4952685 + G 71 -9.3 -3.57561 | overlap 4952652 4952662 CTCATTGCTGACACT CTTCAGAGAGC GTA GCTCTCTGGAA TTTAACGGATTGCAA TERM 4890 4952662 - 4952684 + G 81 -12.8 -2.74322 | overlap 4952652 4952661 TCATTGCTGACACTC TTCAGAGAGC GTA GCTCTCTGGA ATTTAACGGATTGCA Ssed_4043 4952473 - 4953207 + | hypothetical protein Ssed_4044 4954277 - 4953204 - | putative plasmid transfer protein TERM 4891 4954444 - 4954420 - R 100 -10 -5.45652 | ATTCGGAACAAAAAA GCCCGAAACC ATTCA GATTCCGGGC TAAAACAACACTTTG Ssed_4045 4955429 - 4954488 - | polysulfide reductase, subunit C Ssed_4046 4955998 - 4955426 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_4047 4958293 - 4956011 - | molybdopterin oxidoreductase Ssed_4048 4958725 - 4960185 + | radical SAM family Fe-S protein Ssed_4049 4960201 - 4961157 + | hypothetical protein Ssed_4050 4961154 - 4961939 + | methylase involved in ubiquinone/menaquinone biosynthesis-like protein TERM 4892 4961998 - 4961975 - T 91 -13.2 -3.04322 | opp_overlap 4961973 TTCAACCCCGGAATA GCCGGAATCA TATC TGACTCCGGC AATAAATTAAGCTTA Ssed_4051 4962377 - 4962039 - | hypothetical protein Ssed_4052 4963601 - 4962456 - | nitric oxide reductase Ssed_4053 4965094 - 4963598 - | anaerobic nitric oxide reductase flavorubredoxin TERM 4893 4964066 - 4964081 + g 76 -9 -3.9461 | opp_overlap 4964061 4964062, overlap 4964063 CCAACCGAAACTGCC GAAGGC GCCG GCCTTC TTGTTCTTAAAGCGC TERM 4894 4964870 - 4964903 + g 73 -10.5 -3.22077 | gap 1, opp_overlap 4964866 4964877, overlap 4964853 4964867 4964866 GGCATGATTAATGAC GATGTA-ATCGATCTG CTT CAGATCGATCTCCATC TCTAGTTTTTGTACA TERM 4895 4964895 - 4964877 - G 79 -11.8 -3.11687 | opp_overlap 4964870 4964867 4964866, overlap 4964866 TTAATGACGATGTAA TCGATCTG CTT CAGATCGA TCTCCATCTCTAGTT TERM 4896 4965377 - 4965402 + H 73 -6.9 -4.24075 | TGACACTCTCATATC CCCTATATGCC GATT GGTATATATGG TTTATATTCATAGGT Ssed_4054 4965487 - 4965684 + | hypothetical protein Ssed_4055 4965755 - 4966339 + | putative methyltransferase Ssed_4056 4967298 - 4966399 - | LysR family substrate binding transcriptional regulator Ssed_4057 4967543 - 4968262 + | short-chain dehydrogenase/reductase SDR Ssed_4058 4968743 - 4969072 + | cytochrome c family protein Ssed_4059 4969287 - 4970999 + | hypothetical protein Ssed_4060 4971045 - 4972448 + | cytochrome c, putative TERM 4897 4972497 - 4972472 - f 81 -12 -2.7386 | opp_overlap 4972472 AATCCAGCGTAATTA GGGTACTCAT CCTCCC ATGAGTACCC TATCGTCAGCCGACC TERM 4898 4972472 - 4972497 + F 81 -12 -2.78384 | opp_overlap 4972472 AATCCAGCGTAATTA GGGTACTCAT CCTCCC ATGAGTACCC TATCGTCAGCCGACC Ssed_4061 4972744 - 4973925 + | xanthine/uracil/vitamin C permease TERM 4899 4974016 - 4974034 + T 71 -7.5 -3.83214 | overlap 4974008 4974005 GCTTGAAGGCCTAAC CGATAAG GCCTG CTTATCG TTTGAGTTGGTTTCA TERM 4900 4974075 - 4974091 + T 71 -6.6 -4.02132 | opp_overlap 4974075 TGGGTGTTTGATTAA GTTACG ACGAC CGTAAC TTTATAGCTTTAAAC TERM 4901 4974354 - 4974338 - T 88 -10.9 -4.08767 | overlap 4974348 CCTATCGCTTGAAAA GTTTCGC AAA GCGAAAC CTCGCCCTGAAACCG Ssed_4062 4974903 - 4974550 - | hypothetical protein TERM 4902 4974866 - 4974881 + g 79 -10.4 -3.62384 | opp_overlap 4974863, overlap 4974875 AACGTCGGAATACGT TCGCGC AGAC GCGCGA TTATCTCTCGGTTAT TERM 4903 4975072 - 4975094 + r 72 -9.8 -3.06183 | TCCCCCTCTTGGTCG GGTGTGGACG GAA CGTCCACGAC TTACCTCGGCCTCAA Ssed_4063 4976289 - 4975186 - | N-ethylmaleimide reductase, putative TERM 4904 4975761 - 4975786 + g 80 -7.5 -4.57837 | opp_overlap 4975766, overlap 4975763 CACCATGGATCTCCA CACCATCGAAG CCTA CATCGATGGCG TTTTTCGCCGCCTGT Ssed_4064 4976421 - 4977335 + | LysR family transcriptional regulator Ssed_4065 4977885 - 4977427 - | hypothetical protein TERM 4905 4978150 - 4978126 - R 75 -10.1 -3.00022 | overlap 4978130 CGCAGGTGATAGACA CCAATGAAGAT TGG ATCTTCAATGG ACTAAACATACACCA TERM 4906 4978199 - 4978182 - R 74 -4.1 -5.06414 | opp_overlap 4978182 CTCCCCCAACAAAAA GCCTC CCTCCATT GAGGC CTTAATGATCAATAG Ssed_4066 4980042 - 4978201 - | integral membrane sensor signal transduction histidine kinase TERM 4907 4978939 - 4978965 + g 100 -15.2 -2.9356 | overlap 4978924 4978932 4978941 ACTCTGCAGGCGCTC CAGCTGCAGGGC CTT GTCCTGTAGCTG TCTCTCGGTATCGAT TERM 4908 4978941 - 4978963 + g 81 -12 -3.01912 | overlap 4978924 4978932 4978939 TCTGCAGGCGCTCCA GCTGCAGGGC CTT GTCCTGTAGC TGTCTCTCGGTATCG TERM 4909 4979434 - 4979423 - G 71 -7.2 -4.05033 | opp_overlap 4979430 4979431 TCGAGGGTACAGAAA GGCG TGAT CGCC GCCTCGACGGTTTTA TERM 4910 4980478 - 4980490 + G 71 -4.7 -4.52873 | opp_overlap 4980479, overlap 4980479 CTACTCGAAATAGAC AGCCC ACT GGGCA TTATTTTTCTCACCG TERM 4911 4980581 - 4980571 - g 83 -8.2 -4.57073 | opp_overlap 4980556 GACTTTTTCCAAAAA CCCG TTT CGGG AAAAGCCTTGAGTTG Ssed_4067 4980256 - 4980885 + | two component LuxR family transcriptional regulator TERM 4912 4980933 - 4980951 + T 95 -13.2 -3.57263 | TCTGGGGCAGTTTGC CTGCGACA CCT TGTCGCAG TTTGCACATAAACCT TERM 4913 4981156 - 4981185 + T 95 -9.2 -5.42259 | TCCACTGCACTACCC TCCCCGAGCGAC TCCTCC GTCCCCCGGGGA TTTTTTTCAACATAG Ssed_4068 4982180 - 4981206 - | diguanylate cyclase with GAF sensor TERM 4914 4981838 - 4981826 - G 75 -3.3 -5.0133 | CACTTGGCCAAAAAA CCGGA ACG CCCAG GTAGGAGGTAAACCC Ssed_4069 4983067 - 4982465 - | two component Fis family transcriptional regulator Ssed_4070 4984322 - 4983072 - | integral membrane sensor signal transduction histidine kinase Ssed_4071 4985124 - 4984339 - | hypothetical protein Ssed_4072 4985215 - 4987200 + | hypothetical protein Ssed_4073 4988201 - 4987263 - | pseudouridine synthase Ssed_4074 4988831 - 4988256 - | ATP-dependent protease La Ssed_4075 4990069 - 4989014 - | hypothetical protein Ssed_4076 4990174 - 4990608 + | hypothetical protein TERM 4915 4990702 - 4990678 - f 74 -9.3 -3.53091 | overlap 4990680 AGGGCTTGTTCGAAA CAGCATGAGCG CTA CACTCATGCCA TAAGCAGCCAATAAA TERM 4916 4990700 - 4990680 - f 86 -11.9 -3.34398 | overlap 4990678 GGCTTGTTCGAAACA GCATGAGCG CTA CACTCATGC CATAAGCAGCCAATA Ssed_4077 4990730 - 4991191 + | hypothetical protein Ssed_4078 4991233 - 4991769 + | hypothetical protein Ssed_4079 4992251 - 4992715 + | hypothetical protein TERM 4917 4992804 - 4992825 + T 100 -9.4 -5.252 | overlap 4992805 CACCATCTCTGCATT TGGCAGCC TGGCTT GGCTGCCG TTTTTTCTCAAACTA TERM 4918 4992805 - 4992824 + T 83 -10.7 -3.74397 | overlap 4992804 ACCATCTCTGCATTT GGCAGCC TGGCTT GGCTGCC GTTTTTTCTCAAACT Ssed_4080 4993791 - 4992904 - | cation diffusion facilitator family transporter TERM 4919 4993831 - 4993812 - R 91 -10.7 -4.56775 | ACTCCTTCTGAAAAA GCGGAGC GACCCT GCTCCGC GTACTAAATTAACCA TERM 4920 4994016 - 4994063 + r 83 -12.8 -2.78384 | opp_overlap 4994016 4994033, overlap 4994022 4994025 AAAGGGGGTCATATA CCCAAGCTACTTCAAAATGCTG AATC CTGCATTTCGAGGTCGTTTGGG TATAGTGAGCAGGGC TERM 4921 4994063 - 4994016 - R 77 -10.6 -2.8806 | opp_overlap 4994016 4994022 4994025, overlap 4994033 AAAGGGGGTCATATA CCCAAGCTACTTCAAAATGCTG AATC CTGCATTTCGAGGTCGTTTGGG TATAGTGAGCAGGGC Ssed_4081 4997395 - 4994147 - | CzcA family heavy metal efflux protein Ssed_4082 4998811 - 4997444 - | RND family efflux transporter MFP subunit TERM 4922 4998738 - 4998720 - G 78 -11 -3.34646 | overlap 4998716 4998718 AAGGTGATAAACAGA CCAAAGCC CAT GGCTCTGG TGATCGCATTGGTTG Ssed_4083 5000161 - 4998830 - | outer membrane efflux family protein, putative Ssed_4084 5000852 - 5000376 - | hypothetical protein Ssed_4085 5001187 - 5000984 - | hypothetical protein Ssed_4086 5001675 - 5001310 - | hypothetical protein Ssed_4087 5002058 - 5002486 + | hypothetical protein TERM 4923 5002627 - 5002597 - f 71 -4 -4.83615 | CATCTTGCAGAAAAA GTCGCCGAAATTGA CGC TAAATGTCGACAAC TCCCTAAACTTCTGT Ssed_4088 5002722 - 5003177 + | 3-dehydroquinate dehydratase TERM 4924 5003180 - 5003220 + F 70 -8.3 -3.29511 | opp_overlap 5003179, overlap 5003180 5003187 GGCAGAGCATTAACG CCTAGGTTCTAGGTTCTAG GTT CTAGGTTCTAGGTTCTAGG TTCTGACACAGTGAA Ssed_4089 5003270 - 5003806 + | acetylCoA carboxylase, BccP subunit TERM 4925 5004195 - 5004179 - g 73 -5.1 -4.57073 | opp_overlap 5004192, overlap 5004192 CATCGCTTTCAAAAA CAGATGC GAT ACATCCG GGGTACGGATTCCTG TERM 4926 5004453 - 5004433 - g 77 -6.7 -4.5442 | overlap 5004434 CCCGTAATCATAAAA GCCACCGCC GGT GGTGGTGGA CGAGGCATGAGGGTC TERM 4927 5004452 - 5004434 - g 75 -10.2 -3.3217 | overlap 5004433 CCGTAATCATAAAAG CCACCGCC GGT GGTGGTGG ACGAGGCATGAGGGT TERM 4928 5005231 - 5005202 - g 73 -3.7 -4.85599 | gap 1, overlap 5005228 TTGAGGGCATAAAAA CCAATATC-CCTCT GTT AAAGAAGATACTGG CTGATGAAGGCTTCA Ssed_4090 5003935 - 5005305 + | acetyl CoA carboxylase, biotin carboxylase subunit TERM 4929 5005316 - 5005284 - T 74 -9.1 -3.52906 | opp_overlap 5005284, overlap 5005282 5005286 5005309 TTATCTTGAGAAAGA GATCCTAGAACCTAG GAA CTAGGAACTAGGAAC TAGGAACTAGGAACT TERM 4930 5005314 - 5005286 - T 77 -10.3 -3.33798 | opp_overlap 5005284, overlap 5005284 5005282 5005309 ATCTTGAGAAAGAGA TCCTAGAACCTAG GAA CTAGGAACTAGGA ACTAGGAACTAGGAA Ssed_4091 5008520 - 5005338 - | metal dependent phosphohydrolase TERM 4931 5008297 - 5008310 + g 73 -4.5 -4.74801 | CTGGAGAGGAGTTTT GCGGT ATTG ACTGC TTTTTCATCGACTTG Ssed_4092 5009205 - 5008594 - | hypothetical protein TERM 4932 5009435 - 5009402 - R 100 -9.7 -5.4111 | opp_overlap 5009402, overlap 5009423 5009424 AATAAGCATAAAAAA GGCTCCTAATCAGTT AATA AACTAATTCAGAGCC TAAATTAATGCCGCG Ssed_4093 5009780 - 5009532 - | hypothetical protein Ssed_4094 5010117 - 5010602 + | ribonuclease activity regulator protein RraA TERM 4933 5010674 - 5010640 - f 83 -9.4 -3.94381 | opp_overlap 5010644, overlap 5010642 5010644 ATAGAAGTCGATAAA GAGAGGATGATGAAAC CCG GTTTCACCATCCTTTT TTATTTTCAGCATCG TERM 4934 5010672 - 5010642 - f 89 -12 -3.55592 | opp_overlap 5010644, overlap 5010640 5010644 AGAAGTCGATAAAGA GAGGATGATGAAAC CCG GTTTCACCATCCTT TTTTATTTTCAGCAT TERM 4935 5010670 - 5010644 - f 100 -14.6 -3.34646 | opp_overlap 5010644, overlap 5010642 5010640 AAGTCGATAAAGAGA GGATGATGAAAC CCG GTTTCACCATCC TTTTTTATTTTCAGC TERM 4936 5010644 - 5010670 + F 100 -12.4 -5.79595 | opp_overlap 5010644 5010642 5010640 AAGTCGATAAAGAGA GGATGATGAAAC CCG GTTTCACCATCC TTTTTTATTTTCAGC Ssed_4095 5010839 - 5011882 + | arginase/agmatinase/formiminoglutamase Ssed_4096 5012128 - 5012883 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 4937 5013023 - 5013042 + G 88 -8.6 -4.67692 | gap 1, opp_overlap 5013025, overlap 5013025 ACTGTGCATTCAATT GA-GCCAGC TCA GCTGGCCTC TTTATTTAGTTTTCG TERM 4938 5013025 - 5013039 + G 78 -11.4 -2.93149 | opp_overlap 5013025, overlap 5013023 TGTGCATTCAATTGA GCCAGC TCA GCTGGC CTCTTTATTTAGTTT TERM 4939 5013039 - 5013025 - g 75 -11.4 -2.54896 | opp_overlap 5013025 5013023 TGTGCATTCAATTGA GCCAGC TCA GCTGGC CTCTTTATTTAGTTT Ssed_4097 5012895 - 5013518 + | hypothetical protein TERM 4940 5014816 - 5014802 - g 71 -6.4 -4.28049 | TGGAAAACGGCAAAA CCCTTC CTG GAAGAG TGGATGTCGGAACAG Ssed_4098 5013515 - 5015164 + | 2-polyprenylphenol 6-hydroxylase Ssed_4099 5015224 - 5015460 + | twin arginine-targeting protein translocase TERM 4941 5015839 - 5015825 - g 73 -2.1 -5.07275 | gap 1, overlap 5015827 CTACAGAGACAAAAA CAGCTG AGAC CAGC-G CGAATTCTGAAAAAC Ssed_4100 5015467 - 5015865 + | twin-arginine translocation protein, TatB subunit Ssed_4101 5015869 - 5016636 + | sec-independent protein translocase, TatC subunit TERM 4942 5016859 - 5016882 + G 78 -12.4 -2.70932 | opp_overlap 5016853 5016862, overlap 5016861 CATCTCAAAGCAGTA CAAGCGCAGC ATCC GCTGCGCCTG TCGTTGCGACGGCAA TERM 4943 5016879 - 5016862 - g 89 -12.7 -3.49924 | opp_overlap 5016861 5016859, overlap 5016853 CTCAAAGCAGTACAA GCGCAGC ATCC GCTGCGC CTGTCGTTGCGACGG TERM 4944 5017139 - 5017149 + G 71 -6.8 -4.1891 | TTATAAGCTGAAGGC CGGT CAA ACCG TTTATGTTGAAAAAG Ssed_4102 5016696 - 5017235 + | hypothetical protein Ssed_4103 5017235 - 5018029 + | TatD-related deoxyribonuclease Ssed_4104 5018065 - 5019897 + | diguanylate cyclase Ssed_4105 5020015 - 5021031 + | delta-aminolevulinic acid dehydratase TERM 4945 5021055 - 5021080 + F 82 -11.9 -2.99471 | opp_overlap 5021060, overlap 5021060 CACTTTAGCTCTAAT CGAAAGCCGCA TTTA TGCGGCTTTCC TGTATCTGGCCCTCA TERM 4946 5021075 - 5021060 - f 80 -10.4 -3.75629 | opp_overlap 5021055 5021060 TAGCTCTAATCGAAA GCCGCA TTTA TGCGGC TTTCCTGTATCTGGC TERM 4947 5021060 - 5021075 + F 84 -10.4 -3.91196 | opp_overlap 5021060, overlap 5021055 TAGCTCTAATCGAAA GCCGCA TTTA TGCGGC TTTCCTGTATCTGGC Ssed_4106 5021328 - 5021867 + | hypothetical protein TERM 4948 5021903 - 5021888 - T 100 -11.8 -6.12458 | opp_overlap 5021888 TAAAAAAATAAAAAA GGCCGC AGAT GCGGCC TTTTTAGTAAATGAA TERM 4949 5021888 - 5021903 + T 100 -11.8 -4.7497 | opp_overlap 5021888 TAAAAAAATAAAAAA GGCCGC AGAT GCGGCC TTTTTAGTAAATGAA Ssed_4107 5024908 - 5021924 - | putative oar protein TERM 4950 5022452 - 5022470 + g 73 -8.8 -3.88601 | GTCATAAGAGGTAGT CCAACCCG GAT CGGCTTGG TTATTATCGGTTTTA TERM 4951 5024310 - 5024267 - G 85 -13.6 -2.8474 | gap 1, opp_overlap 5024275, overlap 5024274 5024275 TGGTAGGGACAATGA GCTTAAACCGGTCTTAATATT AGT AATATTAAGACC-GTTTAAGA AATAAGCATTTTCAG TERM 4952 5024304 - 5024274 - G 90 -12.8 -3.64609 | opp_overlap 5024275, overlap 5024267 5024275 GACAATGAGCTTAAA CCGGTCTTAATATT AGT AATATTAAGACCGT TTAAGAAATAAGCAT TERM 4953 5024275 - 5024303 + g 100 -16.3 -3.55444 | opp_overlap 5024274 5024267 5024275 ACAATGAGCTTAAAC CGGTCTTAATATT AGT AATATTAAGACCG TTTAAGAAATAAGCA TERM 4954 5024303 - 5024275 - G 100 -16.3 -2.78283 | opp_overlap 5024275, overlap 5024274 5024267 ACAATGAGCTTAAAC CGGTCTTAATATT AGT AATATTAAGACCG TTTAAGAAATAAGCA Ssed_4108 5026191 - 5025274 - | guanosine-5'-triphosphate,3'-diphosphate diphosphatase Ssed_4109 5027510 - 5026203 - | ATP-dependent RNA helicase RhlB TERM 4955 5026251 - 5026263 + g 71 -9.1 -3.53012 | overlap 5026234 TGGGGCGTTACGATT GCCAC TAC GTGGC TTTCCACCCGAGCCA TERM 4956 5026811 - 5026831 + g 80 -3.9 -5.28481 | opp_overlap 5026775 ATGGATAGAAGATCT CCTCTTTGA TGT TCTTAGAGG TTTTTTCGTTCGGTG Ssed_4110 5027685 - 5028011 + | thioredoxin Ssed_4111 5028267 - 5029532 + | transcription termination factor Rho TERM 4957 5029564 - 5029580 + T 100 -9.4 -5.4251 | opp_overlap 5029564 AAAAGCATAAAGAAA GCCGCA CATGT TGCGGC TTTTTTGTGTCTGGA TERM 4958 5029580 - 5029564 - T 93 -9.4 -4.66388 | opp_overlap 5029564 AAAAGCATAAAGAAA GCCGCA CATGT TGCGGC TTTTTTGTGTCTGGA TERM 4959 5029712 - 5029766 + T 70 -8.6 -3.34962 | opp_overlap 5029709, overlap 5029733 5029734 5029740 5029741 5029747 5029748 AACACACCAAAGGCT CCTAGGTTCTAGGTTCTAGGCTCTAG GCT CTAGGTTCTAGGCTCTAGGCTCTAGG TTCTAGGCTCTAGGC Ssed_4112 5030713 - 5029811 - | LysR family transcriptional regulator TERM 4960 5030799 - 5030774 - R 100 -10.5 -5.60993 | opp_overlap 5030778, overlap 5030778 GTCTGCATAAAAAAA GAAAGCCTGCT TTAA AGCAGGCTTTA TACCAATGGCTTCAC TERM 4961 5030795 - 5030778 - R 100 -11.3 -5.27709 | opp_overlap 5030778, overlap 5030774 GCATAAAAAAAGAAA GCCTGCT TTAA AGCAGGC TTTATACCAATGGCT TERM 4962 5030778 - 5030795 + r 90 -11.3 -3.87994 | opp_overlap 5030778 5030774 GCATAAAAAAAGAAA GCCTGCT TTAA AGCAGGC TTTATACCAATGGCT Ssed_4113 5031558 - 5030827 - | fumarate reductase iron-sulfur subunit Ssed_4114 5033579 - 5031555 - | fumarate reductase flavoprotein subunit Ssed_4115 5034359 - 5033691 - | fumarate reductase respiratory complex, transmembrane subunit Ssed_4116 5035243 - 5034518 - | fumarate reductase cytochrome b-556 subunit TERM 4963 5034616 - 5034630 + g 71 -2.8 -4.83615 | opp_overlap 5034616 5034623, overlap 5034616 CGATCAGATAGATGA TCAACA CCT TGATGA TTTTTCTCAAGCCTC Ssed_4117 5035768 - 5036649 + | ribosomal protein L11 methyltransferase TERM 4964 5036773 - 5036758 - f 74 -4 -5.06451 | gap 1, opp_overlap 5036762 5036764, overlap 5036759 5036769 CACCAGCTCAAAAAA GGCG-TA CTA TAGCGCC CCTTTGAAGCGCTAA Ssed_4118 5036801 - 5037769 + | nifR3 family TIM-barrel protein Ssed_4119 5037788 - 5038093 + | Fis family transcriptional regulator TERM 4965 5038146 - 5038116 - T 100 -14.3 -3.53091 | opp_overlap 5038113 5038124, overlap 5038124 ATCTCTTGCTTTAAA TAAAAAAACCAGC GCTAT GCTGGTTTTTTTA TGCCTGATTTTTATG TERM 4966 5038124 - 5038138 + T 100 -7.8 -5.64274 | opp_overlap 5038116 5038124, overlap 5038113 CTTTAAATAAAAAAA CCAGCG CTA TGCTGG TTTTTTTATGCCTGA TERM 4967 5038138 - 5038124 - T 100 -7.1 -5.95539 | opp_overlap 5038124 5038113, overlap 5038116 CTTTAAATAAAAAAA CCAGC GCTAT GCTGG TTTTTTTATGCCTGA TERM 4968 5038467 - 5038452 - T 72 -10.4 -2.66335 | opp_overlap 5038452, overlap 5038449 CCAAGAGAGAATTTA GCCCCT GAGC AGGGGC TTTCATATGAGAGTG TERM 4969 5038452 - 5038467 + T 84 -10.4 -3.83502 | opp_overlap 5038452 5038449 CCAAGAGAGAATTTA GCCCCT GAGC AGGGGC TTTCATATGAGAGTG Ssed_4120 5040273 - 5038804 - | hypothetical protein Ssed_4121 5040954 - 5040325 - | peptidylprolyl isomerase, FKBP-type TERM 4970 5040730 - 5040754 + g 71 -4.2 -4.66163 | opp_overlap 5040732, overlap 5040732 5040736 AGCTTCGCGTTGACG AATGGCCGCT GCCAG AGCGGCGATA TTTTTAAATGCCGAT TERM 4971 5040905 - 5040859 - G 71 -8.9 -3.57561 | gap 2, opp_overlap 5040859 CTCCAATCCGTCAAA GTTATGAGTTTGTAGGTGGCGGC CAA ACTGCCACCC-C-AACCCATAAC TGACTTTCTGCTCAT Ssed_4122 5041511 - 5041002 - | hypothetical protein Ssed_4123 5041796 - 5042365 + | hypothetical protein TERM 4972 5042437 - 5042473 + F 71 -6.7 -3.9777 | GAGGTCAATAATATG CACCTTAAAGATATAAA TAA TTTGCAGCTTTGAGGTG TTTATGAGTGTTACA Ssed_4124 5042477 - 5043187 + | hypothetical protein TERM 4973 5043212 - 5043233 + T 93 -11.5 -4.35646 | opp_overlap 5043214, overlap 5043214 ACGACCGGGTACAAA AAGGCCGGC TATT GCCGGCCTG TTTATATTTCCGTCT TERM 4974 5043214 - 5043231 + T 100 -14.1 -3.77188 | opp_overlap 5043214, overlap 5043212 GACCGGGTACAAAAA GGCCGGC TATT GCCGGCC TGTTTATATTTCCGT TERM 4975 5043231 - 5043214 - T 100 -14.1 -4.83615 | opp_overlap 5043214 5043212 GACCGGGTACAAAAA GGCCGGC TATT GCCGGCC TGTTTATATTTCCGT Ssed_4125 5043831 - 5043253 - | urease accessory protein UreJ Ssed_4126 5044653 - 5043931 - | HAD family hydrolase Ssed_4127 5045558 - 5044653 - | tyrosine recombinase XerC Ssed_4128 5046359 - 5045721 - | hypothetical protein TERM 4976 5046321 - 5046332 + g 80 -4.4 -5.22039 | TATTAGTATTTCGTC GAAG GGGA CTTC TTTTTTCACTTTAGA Ssed_4129 5047198 - 5046356 - | diaminopimelate epimerase TERM 4977 5046974 - 5046960 - G 71 -6.4 -4.17491 | overlap 5046964 ACGAAACGGGCAAAA CAACGG GCA CCATTG CCACACTGTTCGACC Ssed_4130 5048529 - 5047285 - | diaminopimelate decarboxylase Ssed_4131 5048934 - 5049263 + | frataxin family protein Ssed_4132 5052025 - 5049602 - | adenylate cyclase TERM 4978 5051858 - 5051843 - G 73 -10.4 -3.26717 | AGGGACATAATTGAA GACGCC GGAA GGCGTC ATGGAACCGTTATAA Ssed_4133 5052227 - 5053156 + | porphobilinogen deaminase Ssed_4134 5053183 - 5053917 + | uroporphyrinogen III synthase HEM4 TERM 4979 5054561 - 5054530 - g 77 -6.7 -4.56597 | gap 1, opp_overlap 5054537, overlap 5054560 CTCTGGCTGGAAAAA GATCCAAGCACGGC GGCGA GCC-TGCTTAAATC GGCCGACGCTCGAAT Ssed_4135 5054032 - 5055183 + | protein of unknown function DUF513, HemX Ssed_4136 5055180 - 5056349 + | HemY domain-containing protein TERM 4980 5056369 - 5056399 + F 100 -14.3 -3.36878 | opp_overlap 5056369 5056372 5056377, overlap 5056372 5056377 TATACCCATTTATAA TAAGAAAACTACC TGTAT GGTAGTTTTCTTA TTATGGCTCAATACA TERM 4981 5056399 - 5056369 - f 100 -14.3 -3.37354 | opp_overlap 5056369 5056372 5056377, overlap 5056372 5056377 TATACCCATTTATAA TAAGAAAACTACC TGTAT GGTAGTTTTCTTA TTATGGCTCAATACA TERM 4982 5056372 - 5056396 + F 90 -11.6 -3.82378 | opp_overlap 5056369 5056372 5056377, overlap 5056369 5056377 ACCCATTTATAATAA GAAAACTACC TGTAT GGTAGTTTTC TTATTATGGCTCAAT TERM 4983 5056396 - 5056372 - f 90 -11.6 -3.82378 | opp_overlap 5056372 5056369 5056377, overlap 5056369 5056377 ACCCATTTATAATAA GAAAACTACC TGTAT GGTAGTTTTC TTATTATGGCTCAAT TERM 4984 5056391 - 5056377 - f 79 -5.7 -4.95547 | opp_overlap 5056372 5056369 5056377, overlap 5056372 5056369 TTTATAATAAGAAAA CTACC TGTAT GGTAG TTTTCTTATTATGGC TERM 4985 5056377 - 5056391 + F 79 -5.7 -4.95547 | opp_overlap 5056377 5056372 5056369, overlap 5056372 5056369 TTTATAATAAGAAAA CTACC TGTAT GGTAG TTTTCTTATTATGGC Ssed_4137 5056631 - 5061430 + | putative outer membrane adhesin like proteiin TERM 4986 5061516 - 5061481 - f 90 -11.2 -4.0942 | opp_overlap 5061486 5061490, overlap 5061482 5061485 TATCTAGCAGAGAAA CGCAGCGAAGCCACTA TATT TAGTGGCTTCGTTGTA ACGGCCTAACTGCCA TERM 4987 5061515 - 5061482 - f 84 -12.5 -3.0517 | opp_overlap 5061486 5061490, overlap 5061481 5061485 ATCTAGCAGAGAAAC GCAGCGAAGCCACTA TATT TAGTGGCTTCGTTGT AACGGCCTAACTGCC TERM 4988 5061512 - 5061485 - f 83 -12.8 -2.74244 | opp_overlap 5061486 5061490, overlap 5061482 5061481 TAGCAGAGAAACGCA GCGAAGCCACTA TATT TAGTGGCTTCGT TGTAACGGCCTAACT TERM 4989 5061486 - 5061511 + F 100 -16.3 -3.29511 | opp_overlap 5061485 5061482 5061481, overlap 5061490 AGCAGAGAAACGCAG CGAAGCCACTA TATT TAGTGGCTTCG TTGTAACGGCCTAAC TERM 4990 5061490 - 5061507 + F 75 -9.9 -3.44146 | opp_overlap 5061485 5061482 5061481, overlap 5061486 GAGAAACGCAGCGAA GCCACTA TATT TAGTGGC TTCGTTGTAACGGCC TERM 4991 5061595 - 5061625 + F 86 -12.1 -3.37354 | opp_overlap 5061595 5061598 5061602, overlap 5061598 5061603 TATATCCATTTATAA TAAGAAAGCTACC TGTGT GGTAGTTTTCTTA TTATGGCTCAATCTA TERM 4992 5061625 - 5061595 - f 75 -9.9 -3.37354 | opp_overlap 5061595 5061598 5061603, overlap 5061598 5061602 TATATCCATTTATAA TAAGAAAGCTACC TGTGT GGTAGTTTTCTTA TTATGGCTCAATCTA TERM 4993 5061622 - 5061598 - f 71 -7.2 -3.82378 | opp_overlap 5061598 5061595 5061603, overlap 5061595 5061602 ATCCATTTATAATAA GAAAGCTACC TGTGT GGTAGTTTTC TTATTATGGCTCAAT TERM 4994 5061598 - 5061622 + F 83 -9.4 -3.82378 | opp_overlap 5061595 5061598 5061602, overlap 5061595 5061603 ATCCATTTATAATAA GAAAGCTACC TGTGT GGTAGTTTTC TTATTATGGCTCAAT TERM 4995 5061603 - 5061617 + F 79 -5.7 -4.95547 | opp_overlap 5061602 5061598 5061595, overlap 5061598 5061595 TTTATAATAAGAAAG CTACC TGTGT GGTAG TTTTCTTATTATGGC Ssed_4138 5061859 - 5071407 + | hypothetical protein TERM 4996 5071517 - 5071480 - f 77 -9.9 -3.46482 | opp_overlap 5071482 5071485 5071490, overlap 5071481 5071490 AACCGAACCAAGCAA CTGTAGCGAAGCCACTA TATT TAGTGGCTTCGCTGTAT CTAAAACACTAACTT TERM 4997 5071516 - 5071481 - f 90 -13.4 -2.67166 | opp_overlap 5071482 5071485 5071490, overlap 5071480 5071490 ACCGAACCAAGCAAC TGTAGCGAAGCCACTA TATT TAGTGGCTTCGCTGTA TCTAAAACACTAACT TERM 4998 5071485 - 5071512 + F 100 -18.6 -2.98942 | opp_overlap 5071481 5071480 5071490, overlap 5071482 5071490 AACCAAGCAACTGTA GCGAAGCCACTA TATT TAGTGGCTTCGC TGTATCTAAAACACT TERM 4999 5071507 - 5071490 - f 72 -9.9 -3.08173 | opp_overlap 5071482 5071490 5071485, overlap 5071481 5071480 AGCAACTGTAGCGAA GCCACTA TATT TAGTGGC TTCGCTGTATCTAAA TERM 5000 5071490 - 5071507 + F 73 -9.9 -3.17797 | opp_overlap 5071481 5071480 5071490, overlap 5071482 5071485 AGCAACTGTAGCGAA GCCACTA TATT TAGTGGC TTCGCTGTATCTAAA Ssed_4139 5071740 - 5084108 + | putative outer membrane adhesin like proteiin TERM 5001 5084115 - 5084161 + F 74 -6.2 -4.46926 | gap 1, opp_overlap 5084121 5084125, overlap 5084116 5084118 CTTCCATAAATCTGC TAATTA-TCAAGATGGTCTAT AGCAAA ATAGACCATCTTGACTAATAC TTTTATAATACAATA TERM 5002 5084116 - 5084160 + F 75 -9.7 -3.27674 | gap 1, opp_overlap 5084121 5084125, overlap 5084115 5084118 TTCCATAAATCTGCT AATTA-TCAAGATGGTCTAT AGCAAA ATAGACCATCTTGACTAATA CTTTTATAATACAAT TERM 5003 5084118 - 5084158 + F 85 -12.3 -3.20028 | gap 1, opp_overlap 5084121 5084125, overlap 5084116 5084115 CCATAAATCTGCTAA TTA-TCAAGATGGTCTAT AGCAAA ATAGACCATCTTGACTAA TACTTTTATAATACA TERM 5004 5084154 - 5084121 - f 95 -15.6 -2.72855 | opp_overlap 5084118 5084116 5084115, overlap 5084125 TAAATCTGCTAATTA TCAAGATGGTCTAT AGCAAA ATAGACCATCTTGA CTAATACTTTTATAA TERM 5005 5084150 - 5084125 - f 80 -10.6 -3.27298 | opp_overlap 5084118 5084116 5084115, overlap 5084121 TCTGCTAATTATCAA GATGGTCTAT AGCAAA ATAGACCATC TTGACTAATACTTTT TERM 5006 5086136 - 5086115 - g 71 -10.1 -2.82327 | overlap 5086114 GGGGCAGAGGCAAAC CGTTGCCCT GGCT AGGGCGACG CTGAACGACCCGCCG Ssed_4140 5084217 - 5086397 + | ABC transporter-related protein TERM 5007 5086768 - 5086756 - g 80 -9.1 -4.2803 | CAGGCTAATGTAAAA CGGCT AGA AGCCG AGCTCAATAGTATTA TERM 5008 5087082 - 5087071 - g 78 -5.8 -4.82901 | CCTCTGGCAGAAAAA GGGA TCGT TCCC GAAGTAGAGCTACTC Ssed_4141 5086390 - 5087772 + | HlyD family type I secretion membrane fusion protein TERM 5009 5088604 - 5088581 - g 71 -3.8 -4.77567 | overlap 5088582 5088585 AGTCGCACAAGAAAA TCATCCGATT TTAA AATCGGCTGC CAGCGATATTGAAGC Ssed_4142 5087802 - 5089220 + | TolC family type I secretion outer membrane protein Ssed_4143 5089220 - 5089825 + | OmpA/MotB domain-containing protein TERM 5010 5090459 - 5090447 - g 73 -3.3 -4.99435 | CTTAACAAGGAAAAA GGACG AGG CGTTC TTGCAGGTTCCTCCA Ssed_4144 5089844 - 5090554 + | hypothetical protein Ssed_4145 5090563 - 5092485 + | diguanylate cyclase/phosphodiesterase TERM 5011 5092543 - 5092511 - f 95 -13.6 -3.38966 | opp_overlap 5092516, overlap 5092516 TACAAGATACAGTAA TAAAAGGCCTCAGA TGAAC TCTGAGGCCTTTTT CGTACCTGGCCGGCC TERM 5012 5092538 - 5092516 - f 100 -13.5 -4.77079 | opp_overlap 5092516, overlap 5092511 GATACAGTAATAAAA GGCCTCAGA TGAAC TCTGAGGCC TTTTTCGTACCTGGC TERM 5013 5092516 - 5092538 + F 100 -13.5 -4.7497 | opp_overlap 5092516 5092511 GATACAGTAATAAAA GGCCTCAGA TGAAC TCTGAGGCC TTTTTCGTACCTGGC TERM 5014 5092871 - 5092836 - f 75 -9.8 -3.41913 | opp_overlap 5092843, overlap 5092837 5092843 CCCACAGCCAAAAAC GGAAAAAGCCTTTCGA TTTC TCGAAGGGCTTTCTCA TAAAATTGGTCGGCC TERM 5015 5092870 - 5092837 - f 90 -13.3 -2.64666 | opp_overlap 5092843, overlap 5092836 5092843 CCACAGCCAAAAACG GAAAAAGCCTTTCGA TTTC TCGAAGGGCTTTCTC ATAAAATTGGTCGGC TERM 5016 5092843 - 5092864 + F 88 -10.9 -3.97834 | opp_overlap 5092837 5092836 5092843 CCAAAAACGGAAAAA GCCTTTCGA TTTC TCGAAGGGC TTTCTCATAAAATTG TERM 5017 5092864 - 5092843 - f 90 -8.7 -4.92239 | opp_overlap 5092843, overlap 5092837 5092836 CCAAAAACGGAAAAA GCCTTTCGA TTTC TCGAAGGGC TTTCTCATAAAATTG TERM 5018 5093072 - 5093051 - f 87 -5.1 -5.52347 | opp_overlap 5093051 AATAAAACGAAAAAA GCCTTCTGA TTTC TCAAGAGGC TTTTCGAAAAGTGGT TERM 5019 5093186 - 5093165 - f 100 -13.1 -5.37593 | opp_overlap 5093165 CCGGAAACGAAAAAA GCCTCTTGA TTTT TCAAGAGGC TTTTCGAAAAGTGGT TERM 5020 5093165 - 5093186 + F 100 -13.1 -4.08945 | opp_overlap 5093165 CCGGAAACGAAAAAA GCCTCTTGA TTTT TCAAGAGGC TTTTCGAAAAGTGGT TERM 5021 5093333 - 5093354 + F 100 -13.1 -4.08945 | opp_overlap 5093333 GATAAAACGAAAAAA GCCTCTTGA TTTC TCAAGAGGC TTTTCGAAAAGTGGT TERM 5022 5093354 - 5093333 - f 100 -13.1 -5.50313 | opp_overlap 5093333 GATAAAACGAAAAAA GCCTCTTGA TTTC TCAAGAGGC TTTTCGAAAAGTGGT TERM 5023 5093468 - 5093447 - f 100 -13.1 -5.37593 | opp_overlap 5093447 CCGGAAACGAAAAAA GCCTCTTGA TTTT TCAAGAGGC TTTTCGAAAGTGGTC TERM 5024 5093447 - 5093468 + F 100 -13.1 -4.10161 | opp_overlap 5093447 CCGGAAACGAAAAAA GCCTCTTGA TTTT TCAAGAGGC TTTTCGAAAGTGGTC TERM 5025 5094884 - 5094898 + G 81 -10 -3.96618 | opp_overlap 5094871 AGGCGTCGCGCCGAA CGACTG CAA CAGTCG TTATTTGAAATTGCA Ssed_4146 5094176 - 5096803 + | diguanylate cyclase/phosphodiesterase with GAF sensor Ssed_4147 5098892 - 5096880 - | ATP-dependent DNA helicase Rep TERM 5026 5098054 - 5098076 + g 85 -9.9 -4.42788 | CTTAAAATACACTGG CTCGAGCGA TAGTT TTGCTCGAG TTTTATCAACTTAAG TERM 5027 5098688 - 5098700 + g 76 -9.1 -3.89956 | opp_overlap 5098686 TACGCCCCATAGACT GAGCG ACA CGCTC TTTCATCTCTCGTGC Ssed_4148 5099114 - 5099755 + | TetR family transcriptional regulator Ssed_4149 5099752 - 5100870 + | RND family efflux transporter MFP subunit Ssed_4150 5100883 - 5103966 + | acriflavin resistance protein TERM 5028 5104025 - 5103992 - f 76 -11.1 -2.74563 | opp_overlap 5103995 CTCATAGCTTAAGCA CTAGGCCCTAACTAT CTTC ATAGTTAGGGCCTTT TTTATTTACACAGCT TERM 5029 5103995 - 5104022 + F 100 -17.2 -5.63517 | opp_overlap 5103992 ATAGCTTAAGCACTA GGCCCTAACTAT CTTC ATAGTTAGGGCC TTTTTTATTTACACA TERM 5030 5104158 - 5104146 - g 70 -7.7 -3.84389 | AAGAAAATCGAAGAA GTTGC TAA GCAAC TGAGCGAAAACCTGC Ssed_4151 5104119 - 5104379 + | hypothetical protein TERM 5031 5104423 - 5104408 - T 80 -10.4 -3.70947 | opp_overlap 5104408, overlap 5104404 CATAATACAAATGAA GAGCGC TTTC GCGCTC TTTTTTATTGTGTAG TERM 5032 5104408 - 5104423 + T 100 -10.4 -5.60689 | opp_overlap 5104408 5104404 CATAATACAAATGAA GAGCGC TTTC GCGCTC TTTTTTATTGTGTAG Ssed_4152 5105284 - 5104445 - | hypothetical protein TERM 5033 5104493 - 5104483 - G 83 -4.6 -5.19275 | ATGCATAAAATAAAA GGCA TCC CGCC AGCAAGACAAGATCT TERM 5034 5105370 - 5105358 - H 70 -7.7 -3.77437 | ATTAATAATATACAA CAGAC TCA GTCTG CAAATATGTTCCGAT Ssed_4153 5105490 - 5106842 + | hypothetical protein Ssed_4154 5107052 - 5107822 + | phosphoesterase, PA-phosphatase related Ssed_4155 5107924 - 5108403 + | AsnC family transcriptional regulator Ssed_4156 5108743 - 5110101 + | sodium:neurotransmitter symporter TERM 5035 5110120 - 5110149 + F 72 -9.9 -2.96329 | opp_overlap 5110121, overlap 5110117 5110142 CATCGGTTCCCCAAA AGCCACCGGGCCT AAAC AGGCTCAGTGGCA TCATTGTTCACTTCA TERM 5036 5110148 - 5110121 - f 100 -13.4 -4.07687 | opp_overlap 5110120 5110117 5110142 ATCGGTTCCCCAAAA GCCACCGGGCCT AAAC AGGCTCAGTGGC ATCATTGTTCACTTC TERM 5037 5110368 - 5110355 - g 71 -6.7 -4.30704 | AACATAAAACAATAA CACTG GCCT CAGTG ATCACCGCTACCATG TERM 5038 5110782 - 5110807 + G 81 -6.1 -4.86731 | gap 1, opp_overlap 5110782 5110783, overlap 5110783 ACAAACCGTAAAATA TGGT-CCGGTGG GCT CCGCCGGAACTG TTTTGTTTGAAAAAG TERM 5039 5110783 - 5110805 + G 87 -11.2 -4.05678 | opp_overlap 5110782 5110783, overlap 5110782 CAAACCGTAAAATAT GGTCCGGTGG GCT CCGCCGGAAC TGTTTTGTTTGAAAA TERM 5040 5111986 - 5112010 + G 74 -10.7 -3.03453 | opp_overlap 5111989, overlap 5111982 5111988 GATACGCCTCTGGGA CAAGTCTCTCC TAT GGAGGGACGTG TATCTGTCAATTATG Ssed_4157 5110336 - 5112339 + | TonB-dependent copper receptor Ssed_4158 5113936 - 5112500 - | aspartate kinase TERM 5041 5113081 - 5113113 + g 73 -7 -4.19817 | gap 1, opp_overlap 5113080 TCAGGTAGACACTAG TC-GCCTCTATCGCC ATAG GGCTATCGAGGCAGA TTTTCCATCGCTGCA Ssed_4159 5114157 - 5114594 + | ankyrin repeat-containing protein TERM 5042 5114638 - 5114663 + T 100 -14.9 -3.65656 | opp_overlap 5114638 TACCTAGTAAAAAAA GCAGCATTGAA CCGA TTCAATGCTGC TTCTGTGTATCGTCC TERM 5043 5114663 - 5114638 - T 100 -14.9 -5.53991 | opp_overlap 5114638 TACCTAGTAAAAAAA GCAGCATTGAA CCGA TTCAATGCTGC TTCTGTGTATCGTCC Ssed_4160 5115852 - 5114710 - | Serine--pyruvate transaminase TERM 5044 5115970 - 5115981 + r 75 -3 -5.22943 | overlap 5115965 5115964 GAAGTACTTGTGCCT TAAG GCAT CTTA TTTTTTAGCTTTAAT TERM 5045 5116117 - 5116102 - R 100 -10.4 -5.55695 | opp_overlap 5116100 CAATAACATAAAAAA GGACGC GGTT GCGTCC TCTCAATTTCTTTAC Ssed_4161 5117679 - 5116129 - | threonine dehydratase Ssed_4162 5119531 - 5117681 - | dihydroxy-acid dehydratase TERM 5046 5118828 - 5118798 - G 73 -10.4 -3.25823 | opp_overlap 5118798 5118797 TCGTGCTTATAGTAA CGGGTAGTCAGATC CAT GATGCGACGACCCG CTTCTAAGAACAGCT Ssed_4163 5120623 - 5119700 - | branched-chain amino acid aminotransferase Ssed_4164 5120968 - 5120708 - | acetolactate synthase small subunit Ssed_4165 5122712 - 5121039 - | acetolactate synthase 2 catalytic subunit TERM 5047 5122860 - 5122885 + r 100 -16.1 -3.37901 | opp_overlap 5122860, overlap 5122850 GCCCTAAACGAAAAA CCCCCCGGTCC TTTC GGAGCGGGGGG TTAGTTGCAATCTTT TERM 5048 5122885 - 5122860 - R 100 -16.1 -4.98531 | opp_overlap 5122860 5122850 GCCCTAAACGAAAAA CCCCCCGGTCC TTTC GGAGCGGGGGG TTAGTTGCAATCTTT TERM 5049 5123042 - 5123059 + r 73 -8.5 -3.73647 | TTGCTTAAATTCGGT CTCTTCA CCTG TGAAGAG TTATTAATCAATACC Ssed_4166 5124787 - 5123306 - | ketol-acid reductoisomerase TERM 5050 5124427 - 5124461 + g 73 -10 -3.30124 | CGCCCTGCTTCATTA GCGGCATAACGGTGTT TAC GGCATCGGTATGCTGC TTATCCGGGGTCAGG TERM 5051 5124952 - 5124971 + H 93 -10 -5.10497 | gap 1 CAGCAGCCAAGCTCT GCCC-CCTC ACC GAGGTGGGC TTTTTTGAGTGCGTT Ssed_4167 5125011 - 5125883 + | DNA-binding transcriptional regulator IlvY Ssed_4168 5125970 - 5126797 + | extracellular solute-binding protein Ssed_4169 5126930 - 5127733 + | diguanylate cyclase Ssed_4170 5128590 - 5127799 - | Serine O-acetyltransferase TERM 5052 5130184 - 5130157 - g 71 -8.2 -3.66378 | opp_overlap 5130158 GAGAGCCGATGGAAA GCGGCGAGGTCG TCAT CTCCCGCGCCGC GGCTAAACTCACCTT Ssed_4171 5129187 - 5130710 + | Mg chelatase, subunit ChlI Ssed_4172 5131799 - 5130753 - | periplasmic sugar-binding protein, putative TERM 5053 5132510 - 5132498 - g 71 -4.1 -4.77157 | TCAACTTAGGAAAAA CCCTA AGC TAAGG GGCAAAGATATCGAG Ssed_4173 5132049 - 5132957 + | phospholipid/glycerol acyltransferase TERM 5054 5133865 - 5133855 - g 87 -6.8 -5.0538 | GGTGATGCTAAAAAA TGGC GTA GCCA AAGAAGATAGGCCTT Ssed_4174 5132962 - 5133882 + | phospholipid/glycerol acyltransferase TERM 5055 5133890 - 5133915 + F 71 -7.6 -3.80461 | opp_overlap 5133888 5133886 GGCCTTAACGATATG GTGCCTGACT CCCGGA ATTCAGGCAC TTTAATCCTCACTTA Ssed_4175 5134347 - 5135072 + | GntR family transcriptional regulator TERM 5056 5135110 - 5135138 + T 83 -5.3 -5.23765 | opp_overlap 5135110 AGAGTTACCAACAAA GGCCTTGCT TCCTCCCTTCC GGCAAGGCC TTTTTCTCTTCTTTC TERM 5057 5135189 - 5135204 + T 78 -7.5 -4.41047 | opp_overlap 5135178 5135189 AGCAGGCACAAAAAA GGCGC CTACTA GCGCC TTTTCATTAACGGGT TERM 5058 5135204 - 5135189 - T 91 -8.2 -5.28778 | opp_overlap 5135189, overlap 5135178 AGCAGGCACAAAAAA GGCGCC TACT AGCGCC TTTTCATTAACGGGT Ssed_4176 5136315 - 5135224 - | branched-chain amino acid aminotransferase Ssed_4177 5137248 - 5136484 - | TetR family transcriptional regulator TERM 5059 5137439 - 5137400 - H 73 -9.4 -3.16668 | GAACATGCCGACCAA GCATATTGTTATCCCAAG TTAA CCGGAGAAAACAATATGC AAACAAGACGTTCAT Ssed_4178 5137436 - 5138938 + | flavocytochrome c flavin subunit Ssed_4179 5138949 - 5139311 + | tetraheme cytochrome c TERM 5060 5139360 - 5139340 - f 82 -11.2 -3.09671 | ATCTCAATCTGAATA TGGAGCTG CCTGC CAGCTCCA AAGTAAAAGCAACAA Ssed_4180 5139404 - 5140144 + | hypothetical protein TERM 5061 5140193 - 5140169 - f 95 -14.3 -3.00476 | opp_overlap 5140165 5140170 ACCCTTAAGCAGAGA TTGAGGCCAGC TCA GCTGGCCTCAT TAAATTAATATGAAA TERM 5062 5140170 - 5140192 + F 100 -17.8 -3.22521 | opp_overlap 5140169, overlap 5140165 CCCTTAAGCAGAGAT TGAGGCCAGC TCA GCTGGCCTCA TTAAATTAATATGAA Ssed_4181 5140203 - 5140670 + | hypothetical protein Ssed_4182 5140736 - 5141863 + | hypothetical protein TERM 5063 5142018 - 5142039 + T 100 -10.2 -5.46657 | GACAACTTGGGTCCG GCCTTCGA CATAAC TCGAAGGC TTTTTTCTTGAAATG Ssed_4183 5142848 - 5142057 - | TetR family transcriptional regulator TERM 5064 5143095 - 5143083 - H 77 -6.3 -4.52589 | opp_overlap 5143067 5143083 5143087 TTTTTCGAGAGAAAA GATCT TCG AGATC TGCTTCACGAATAAA Ssed_4184 5143202 - 5144713 + | flavocytochrome c Ssed_4185 5144725 - 5145093 + | tetraheme cytochrome c, putative TERM 5065 5145825 - 5145813 - g 81 -6.2 -4.95547 | overlap 5145822 5145823 TCTACAACAACAAAA CCGG AAATA CCGG CGATAGCTACGCCGC Ssed_4186 5145143 - 5146276 + | hypothetical protein TERM 5066 5146285 - 5146258 - f 77 -10 -3.36452 | ACGCGTCAACATCAA CTTTGGTTACTA CTTC TAGAAACCAAAG CCTAAGTACTCGCAG TERM 5067 5146297 - 5146330 + F 85 -12.5 -3.13522 | gap 1, overlap 5146295 AAAGCCTAAGTACTC GCAGGTTCAGG-GCAG CTC CCGCATCTGAACCTGC TCTTAGTGCAAACAT TERM 5068 5146437 - 5146453 + F 100 -10.9 -5.40474 | opp_overlap 5146437 AGATTATTGAATCAA GCCCTAT TTT ATAGGGC TTTTTTTAGACCAAT TERM 5069 5146453 - 5146437 - f 80 -10.9 -3.38584 | opp_overlap 5146437 AGATTATTGAATCAA GCCCTAT TTT ATAGGGC TTTTTTTAGACCAAT Ssed_4187 5146487 - 5147560 + | hypothetical protein TERM 5070 5147586 - 5147575 - f 70 -5.8 -4.42081 | AATATAAAGTGAAAA GGCT CCAA AGCC GCCATAAACAGAGCC Ssed_4188 5147769 - 5148512 + | cupin 2 domain-containing protein TERM 5071 5148551 - 5148525 - f 81 -11.7 -2.64107 | gap 1, opp_overlap 5148526, overlap 5148515 TAAATCGTTAGACGA TTAGCGGCCGAT TTAT ATCGGCCGC-AA TGCCTTCAGCATTAC TERM 5072 5148526 - 5148551 + F 90 -13.3 -2.53911 | opp_overlap 5148525 5148515 AAATCGTTAGACGAT TAGCGGCCGAT TTAT ATCGGCCGCAA TGCCTTCAGCATTAC Ssed_4189 5148945 - 5149571 + | hypothetical protein TERM 5073 5149604 - 5149587 - T 71 -6.9 -4.11484 | opp_overlap 5149589, overlap 5149589 GCTAACTGCTTAAAA GAGCCCC GCAA GGGGCTT TTTGCTATGAGAAAG TERM 5074 5149589 - 5149602 + T 93 -9.5 -4.8048 | opp_overlap 5149589 5149587 TAACTGCTTAAAAGA GCCCC GCAA GGGGC TTTTTGCTATGAGAA TERM 5075 5149602 - 5149589 - T 79 -9.5 -3.6543 | opp_overlap 5149589, overlap 5149587 TAACTGCTTAAAAGA GCCCC GCAA GGGGC TTTTTGCTATGAGAA Ssed_4190 5151145 - 5149652 - | Na+/H+ antiporter NhaC Ssed_4191 5151325 - 5151528 + | hypothetical protein Ssed_4192 5151767 - 5151555 - | hypothetical protein TERM 5076 5151842 - 5151868 + r 85 -11.2 -3.28791 | TTACCCTTAGAGTTT CATTAAAAAAAA AAT TTTTTTTTAATG TTGTAAACCAAGCCT TERM 5077 5152019 - 5152046 + r 100 -13.6 -5.94713 | opp_overlap 5152019 CTTATGGCTCGATAA CCGTATTTCTTG CGAC CAGGAAATACGG TTTTTTTTATGCCCT TERM 5078 5152046 - 5152019 - R 85 -11.4 -3.29511 | opp_overlap 5152019 CTTATGGCTCGATAA CCGTATTTCTTG CGAC CAGGAAATACGG TTTTTTTTATGCCCT TERM 5079 5152418 - 5152403 - R 100 -10.4 -5.36441 | opp_overlap 5152403 TCCCGACACAAAAAA GGAGCC ATCA GGCTCC TTTGATCGATATAAC TERM 5080 5152403 - 5152418 + r 80 -10.4 -3.78022 | opp_overlap 5152403 TCCCGACACAAAAAA GGAGCC ATCA GGCTCC TTTGATCGATATAAC Ssed_4193 5153071 - 5152460 - | DsbA oxidoreductase Ssed_4194 5154213 - 5153209 - | serine/threonine protein kinase TERM 5081 5154124 - 5154113 - G 73 -7.2 -4.183 | TTAAGCGCCAATAAA CCCG TTTC CGGG TATACACCCAGACTC Ssed_4195 5154503 - 5154210 - | hypothetical protein Ssed_4196 5154855 - 5154547 - | hypothetical protein TERM 5082 5154771 - 5154760 - G 71 -4.4 -4.81212 | GTCAGCATAATAAAA CAGT GTCC ACTG CGGATCTTGGGTACA TERM 5083 5154897 - 5154880 - R 93 -7 -5.46657 | opp_overlap 5154880 CAGCCCAATAAAAAA GGCGAA ACTTAG TTCGCC TTATTTTACACCGCT TERM 5084 5154880 - 5154897 + r 73 -7 -4.17316 | opp_overlap 5154880 CAGCCCAATAAAAAA GGCGAA ACTTAG TTCGCC TTATTTTACACCGCT Ssed_4197 5155845 - 5154970 - | hypothetical protein Ssed_4198 5156174 - 5156533 + | DsrE family protein Ssed_4199 5156798 - 5157190 + | hypothetical protein TERM 5085 5157200 - 5157181 - f 100 -7.8 -5.72118 | opp_overlap 5157179, overlap 5157182 AAAAAACAGAAAAAA TCACGCCT AATC AGGCGTGG GATATTAAGCCAACA TERM 5086 5157199 - 5157182 - f 90 -11.3 -3.9778 | opp_overlap 5157179, overlap 5157181 AAAAACAGAAAAAAT CACGCCT AATC AGGCGTG GGATATTAAGCCAAC Ssed_4200 5157376 - 5158266 + | hypothetical protein Ssed_4201 5158901 - 5158296 - | hypothetical protein TERM 5087 5158858 - 5158845 - G 73 -2.4 -5.00884 | ACCTTGTTCAAAAAA TAGC TTAGTC GCTA CCTCTATGATTTTTT TERM 5088 5159600 - 5159588 - g 70 -7.7 -3.89354 | TGCCCAAACCAATAA GGCAA GGA TTGCC GACGCCAACCTGGAG Ssed_4202 5159106 - 5160173 + | hypothetical protein Ssed_4203 5160177 - 5161703 + | hypothetical protein TERM 5089 5161709 - 5161699 - f 93 -6.8 -5.40072 | GGGCGGCTAAAAAAA CCTG AAC CAGG AGTACACCATGCCAG Ssed_4204 5161997 - 5164063 + | peptidase S9 prolyl oligopeptidase TERM 5090 5164128 - 5164113 - f 79 -3.2 -5.42131 | opp_overlap 5164106 5164106 5164113, overlap 5164106 CAAGTAGATAAAAAA GCGC TAAAACCG GCGC TTTTTTCATTTCCGG TERM 5091 5164113 - 5164128 + F 82 -3.9 -5.37593 | opp_overlap 5164113 5164106, overlap 5164106 5164106 CAAGTAGATAAAAAA GCGCT AAAACC GGCGC TTTTTTCATTTCCGG Ssed_4205 5164209 - 5164775 + | hypothetical protein TERM 5092 5164802 - 5164784 - T 89 -11.8 -3.66727 | opp_overlap 5164781 GAAGTAGATACAGAA GGTTCTAG GTC CTAGAACC CAGGGAATCGAACCT Ssed_4206 5166439 - 5164940 - | hypothetical protein Ssed_4207 5167522 - 5166932 - | hypothetical protein TERM 5093 5167646 - 5167636 - R 85 -5.4 -5.2189 | TTAACGACTAAAAAA TGAG CGA CTCA ACAGCTTATCTGACG TERM 5094 5167745 - 5167722 - R 100 -8.2 -5.52986 | ATGTTATTAAAAAAA CCTCTACAAC AAAC GTTCTAGAGG CAACCAAATATGATG TERM 5095 5167850 - 5167875 + r 82 -11.9 -2.92642 | CTTCAAAGTCGTTGT CTCATTGCCGG TAAA CCTGCAATGAG TATGTCAATAATGAT TERM 5096 5167934 - 5167969 + r 90 -9.6 -4.386 | opp_overlap 5167937, overlap 5167935 TATGACTATCTGCAA CGAGTCCCCCTCACTG ACAG CTCTGAGGGGGGCTCC TTTTATCAACCGTTA TERM 5097 5167935 - 5167968 + r 91 -13.1 -3.22678 | opp_overlap 5167937, overlap 5167934 ATGACTATCTGCAAC GAGTCCCCCTCACTG ACAG CTCTGAGGGGGGCTC CTTTTATCAACCGTT Ssed_4208 5171020 - 5167982 - | molydopterin dinucleotide-binding region Ssed_4209 5171725 - 5171030 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5098 5171680 - 5171697 + g 85 -7.7 -4.8048 | gap 1, opp_overlap 5171680 GTACGATTGCAAGCA TGGC-GCC GCC GGCCGCCA TTTTTAATATGGAAC Ssed_4210 5172261 - 5173268 + | LysR family transcriptional regulator TERM 5099 5173511 - 5173495 - f 73 -6.6 -4.29302 | overlap 5173492 TGCAGATGAAAATAA GTAGTG AAAAA CACTAC CAAGATGGGGAACAC Ssed_4211 5173529 - 5175745 + | molydopterin dinucleotide-binding region Ssed_4212 5175756 - 5176301 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_4213 5176301 - 5176888 + | cytoplasmic chaperone TorD family protein TERM 5100 5177305 - 5177316 + G 73 -7.2 -4.14977 | TTTGCCAGCCTGTTT GGCG TCAT CGCC TTGTTTATCATCTTC Ssed_4214 5177032 - 5177997 + | formate dehydrogenase, gamma subunit TERM 5101 5178054 - 5178024 - f 84 -12.7 -2.97667 | opp_overlap 5178024, overlap 5178021 CCAGGTATCAAATCA TGCTCACCAGCAT CTCAT ATGGTGGTGAGCA TTCTCAAATAGAGCT TERM 5102 5178024 - 5178054 + F 87 -12.7 -3.32963 | opp_overlap 5178024 5178021 CCAGGTATCAAATCA TGCTCACCAGCAT CTCAT ATGGTGGTGAGCA TTCTCAAATAGAGCT Ssed_4215 5178164 - 5179222 + | porin Ssed_4216 5179280 - 5181223 + | methyl-accepting chemotaxis sensory transducer TERM 5103 5181367 - 5181392 + T 79 -8.9 -3.88291 | opp_overlap 5181354 5181366 5181369 AGTGGTTAATCGAAC CAGGCCGATGA CTTC TCTGCGGCCTG TTTCTCCACATCATC Ssed_4217 5181701 - 5181357 - | hypothetical protein TERM 5104 5181767 - 5181736 - R 76 -7.5 -4.26953 | gap 1, overlap 5181754 AACTAAGGCAATAAA GATAGCATAA-TCG GTAAA CGAATCATGCTATC ACTCGACCTATCTTT TERM 5105 5181785 - 5181808 + r 73 -2.4 -5.27335 | overlap 5181792 TCGACCTATCTTTGG TGCTTAGG CGTGGTTC CCCAAGCA TTTTTCTTTGCCGGA Ssed_4218 5184099 - 5181775 - | hypothetical protein TERM 5106 5182233 - 5182243 + g 75 -5.4 -4.68424 | overlap 5182213 CGATCTGCTCGCTGG TGTG CTT CACA TTTTTCAGTGAATTC TERM 5107 5184055 - 5184035 - G 77 -3.9 -5.14477 | overlap 5184036 GACATAGGTAAAAAA GGAGCTGGA CGC TTCAGCTCA GAGCGATGCTTAGGG TERM 5108 5184285 - 5184260 - R 79 -8.3 -4.08144 | TTGATTAACCATAAA GAGTGTAGGGA TGCT TACCCACACTC ACATAACGGGTACTG Ssed_4219 5184713 - 5184312 - | hypothetical protein Ssed_4220 5185226 - 5186446 + | hypothetical protein Ssed_4221 5186743 - 5188296 + | hypothetical protein TERM 5109 5189081 - 5189067 - g 80 -8.6 -4.37534 | opp_overlap 5189066 AAAGCTATATCAAAA TCATCG TTT CGATGA GATATTTGCAAAATG Ssed_4222 5188354 - 5189157 + | extracellular solute-binding protein Ssed_4224 5190250 - 5189849 - | hypothetical protein Ssed_4223 5189255 - 5189968 + | short chain dehydrogenase/reductase family protein TERM 5110 5190189 - 5190217 + gT 72 -10.4 -2.74461 | opp_overlap 5190183, overlap 5190188 TTAATATCACCAGGC TCCTTAGCCG ATTCAATGA CGGCTAAGGA ATTTAGAAATCGGTG Ssed_4225 5190853 - 5190527 - | small multidrug resistance protein TERM 5111 5191044 - 5191021 - R 100 -13.2 -5.79595 | opp_overlap 5191021 GCCCAAAATAAAAAA GGTGTCGCCA CAAA TGACGACACC TTTTCAGTCGGATCT TERM 5112 5191021 - 5191044 + r 90 -11 -4.19258 | opp_overlap 5191021 GCCCAAAATAAAAAA GGTGTCGCCA CAAA TGACGACACC TTTTCAGTCGGATCT TERM 5113 5191168 - 5191137 - R 73 -7.4 -4.0492 | opp_overlap 5191127 GAAGCTTGAGATAAA GTGATGGTTATAAT GGTG ATAATAACCTTCAC AATAGTTCAATTAGT Ssed_4226 5192018 - 5191179 - | carboxylesterase TERM 5114 5192073 - 5192098 + r 91 -12 -4.09511 | opp_overlap 5192073, overlap 5192076 5192079 GAGCTCCTCTAAAAA TAACAAGCGC CCTGGA GCGCTTGTTA TTTTGAACGACTATT TERM 5115 5192098 - 5192073 - R 100 -12.7 -4.57073 | opp_overlap 5192073 5192076 5192079 GAGCTCCTCTAAAAA TAACAAGCGCC CTGG AGCGCTTGTTA TTTTGAACGACTATT TERM 5116 5192076 - 5192095 + r 85 -9.3 -4.17316 | opp_overlap 5192073, overlap 5192073 5192079 CTCCTCTAAAAATAA CAAGCGC CCTGGA GCGCTTG TTATTTTGAACGACT Ssed_4227 5193243 - 5192113 - | alcohol dehydrogenase Ssed_4228 5193739 - 5193482 - | hypothetical protein Ssed_4229 5194330 - 5193962 - | membrane protein TERM 5117 5194724 - 5194690 - R 81 -11.7 -2.53876 | gap 1, opp_overlap 5194694 5194702, overlap 5194702 TGTCACTCGAAGCCA GGCATAAAAAAAGCGC CGCA GCGCTTTTTTCAT-CC TATGCCGATAGAGCT TERM 5118 5194694 - 5194721 + r 72 -10 -2.62983 | opp_overlap 5194690 5194702, overlap 5194702 ACTCGAAGCCAGGCA TAAAAAAAGCGC CGCA GCGCTTTTTTCA TCCTATGCCGATAGA TERM 5119 5194702 - 5194713 + r 90 -7.2 -5.20216 | opp_overlap 5194702 5194690, overlap 5194694 CCAGGCATAAAAAAA GCGC CGCA GCGC TTTTTTCATCCTATG TERM 5120 5194713 - 5194702 - R 100 -7.2 -5.64274 | opp_overlap 5194694 5194702, overlap 5194690 CCAGGCATAAAAAAA GCGC CGCA GCGC TTTTTTCATCCTATG Ssed_4230 5195270 - 5194773 - | glutathione-dependent formaldehyde-activating enzyme TERM 5121 5195373 - 5195392 + r 100 -13.6 -5.96219 | opp_overlap 5195373 5195375 GATATTTAGCTAAGA CAGCCTCC ATCT GGAGGCTG TTTTTTTTGTCACTG TERM 5122 5195392 - 5195373 - R 93 -13.6 -3.10354 | opp_overlap 5195373, overlap 5195375 GATATTTAGCTAAGA CAGCCTCC ATCT GGAGGCTG TTTTTTTTGTCACTG TERM 5123 5195390 - 5195375 - R 75 -10.4 -3.1082 | opp_overlap 5195373, overlap 5195373 TATTTAGCTAAGACA GCCTCC ATCT GGAGGC TGTTTTTTTTGTCAC Ssed_4231 5196561 - 5195410 - | iron-containing alcohol dehydrogenase Ssed_4232 5196891 - 5197760 + | carbonate dehydratase Ssed_4233 5198047 - 5197787 - | hypothetical protein TERM 5124 5197934 - 5197914 - G 77 -4.7 -5.00616 | CCGTCTCGTAAAAAA TTCTGGTAA TGA TCACCCGAA ACCATTAACGCATCG TERM 5125 5198173 - 5198187 + H 73 -5.6 -4.63218 | overlap 5198172 5198172 AAGCGCACCTCTGTC GGGGTC AAT GACGCC TTTTATTGACCCCAG Ssed_4234 5198442 - 5199650 + | NADH dehydrogenase TERM 5126 5199664 - 5199699 + F 83 -10.6 -3.65902 | opp_overlap 5199669 5199671, overlap 5199669 AAAACATTAGAAAGC AAAAAGTCCGTTTATC GAAA GGTAAACGGGCTTTTG TTTGAATAAGGTGAA TERM 5127 5199669 - 5199694 + F 93 -10.5 -4.90778 | opp_overlap 5199669 5199671, overlap 5199664 ATTAGAAAGCAAAAA GTCCGTTTATC GAAA GGTAAACGGGC TTTTGTTTGAATAAG TERM 5128 5199694 - 5199669 - f 83 -6.1 -5.05505 | opp_overlap 5199669 5199664, overlap 5199671 ATTAGAAAGCAAAAA GTCCGTTTATC GAAA GGTAAACGGGC TTTTGTTTGAATAAG Ssed_4235 5200199 - 5201203 + | ABC transporter substrate-binding protein TERM 5129 5201245 - 5201211 - f 91 -12.2 -3.90286 | opp_overlap 5201216 5201218, overlap 5201217 5201218 CACTATAAACCCAAA CAAAAACGCGAGGCCT ACA AAGCCTCGCTATTTTG CTCCCCATCTAGATT TERM 5130 5201239 - 5201217 - f 100 -9.8 -5.34381 | opp_overlap 5201216 5201218, overlap 5201211 5201218 AAACCCAAACAAAAA CGCGAGGCCT ACA AAGCCTCGCT ATTTTGCTCCCCATC TERM 5131 5201238 - 5201218 - f 95 -13.3 -3.78189 | opp_overlap 5201216 5201218, overlap 5201217 5201211 AACCCAAACAAAAAC GCGAGGCCT ACA AAGCCTCGC TATTTTGCTCCCCAT TERM 5132 5201218 - 5201238 + F 83 -11.1 -3.7331 | opp_overlap 5201218 5201217 5201211, overlap 5201216 AACCCAAACAAAAAC GCGAGGCCT ACA AAGCCTCGC TATTTTGCTCCCCAT TERM 5133 5201373 - 5201394 + G 74 -10.9 -2.8511 | ATATTTAGACGGCAC CTTTCGGGA CTTT TCCCGAGAG TATGGTGATGTCATC Ssed_4236 5201290 - 5202189 + | putative permease Ssed_4237 5202182 - 5203441 + | putative glycine betaine ABC transporter ATP-binding protein TERM 5134 5203693 - 5203723 + G 100 -9.9 -4.72201 | gap 1, overlap 5203710 GACTTCGACGTATTC CG-CATCGATGTTA ATGG TAACGTCGATGACG TTATTTTTTCTGCCC TERM 5135 5203710 - 5203726 + G 100 -9.5 -5.24531 | overlap 5203693 CATCGATGTTAATGG TAACGTC GAT GACGTTA TTTTTTCTGCCCAGT Ssed_4238 5203441 - 5204655 + | hypothetical protein TERM 5136 5204732 - 5204707 - f 100 -20.5 -5.12971 | opp_overlap 5204707 AACAGCCAACAAAAA GCCCGCTTGCC ATAA GGCAAGCGGGC TTTCATTTATTAGGT TERM 5137 5204707 - 5204732 + F 100 -20.5 -4.21744 | opp_overlap 5204707 AACAGCCAACAAAAA GCCCGCTTGCC ATAA GGCAAGCGGGC TTTCATTTATTAGGT TERM 5138 5204789 - 5204820 + F 100 -16 -3.12702 | opp_overlap 5204794, overlap 5204794 TGCAGACAGGCAACA AAAAACCGCATCCC TTAC GGGATGCGGTTTTA CTTTATTAGGTGATG TERM 5139 5204815 - 5204794 - f 100 -15.9 -5.49234 | opp_overlap 5204789 5204794 ACAGGCAACAAAAAA CCGCATCCC TTAC GGGATGCGG TTTTACTTTATTAGG TERM 5140 5204794 - 5204815 + F 100 -15.9 -4.67942 | opp_overlap 5204794, overlap 5204789 ACAGGCAACAAAAAA CCGCATCCC TTAC GGGATGCGG TTTTACTTTATTAGG TERM 5141 5204903 - 5204878 - f 100 -10.5 -5.24796 | opp_overlap 5204878 GGCAGACAACAAAAA GCCCGCTTATC TTTC AATAAACGGGC TTTCTTTTATTAGGT TERM 5142 5204878 - 5204903 + F 85 -7.6 -4.88795 | opp_overlap 5204878 GGCAGACAACAAAAA GCCCGCTTAT CTTTCA ATAAACGGGC TTTCTTTTATTAGGT Ssed_4239 5205184 - 5206191 + | hypothetical protein Ssed_4240 5206472 - 5207050 + | hypothetical protein Ssed_4241 5210055 - 5207332 - | UvrD/REP helicase TERM 5143 5209879 - 5209893 + g 80 -8.6 -4.39407 | TGGCTCATTGCTTAT CGCTTT TAT AAAGCG TTTTGAGTTCTTTCC Ssed_4242 5210636 - 5211499 + | hypothetical protein TERM 5144 5211725 - 5211713 - f 75 -5.5 -4.68908 | CCCAGTGAAAACAAA CCGTC TGT AACGG CCACTAAAACGGCTC Ssed_4243 5211806 - 5212735 + | phage integrase Ssed_4244 5212728 - 5214788 + | AAA ATPase, central region Ssed_4245 5214894 - 5215346 + | hypothetical protein Ssed_4246 5215460 - 5215888 + | hypothetical protein Ssed_4247 5216039 - 5217568 + | hypothetical protein TERM 5145 5217616 - 5217635 + T 79 -8.6 -4.12198 | gap 1, opp_overlap 5217616 5217617, overlap 5217617 CACCTAATTCGATAA T-GCGGGGA TAA TCCCCGCTA TTTTCACCCCTTGTA TERM 5146 5217634 - 5217616 - T 77 -10.2 -3.36968 | opp_overlap 5217616 5217617, overlap 5217617 CACCTAATTCGATAA TGCGGGGA TAA TCCCCGCT ATTTTCACCCCTTGT TERM 5147 5217617 - 5217633 + T 95 -13.7 -3.6543 | opp_overlap 5217616 5217617, overlap 5217616 ACCTAATTCGATAAT GCGGGGA TAA TCCCCGC TATTTTCACCCCTTG TERM 5148 5217633 - 5217617 - T 91 -13.7 -2.6186 | opp_overlap 5217617 5217616, overlap 5217616 ACCTAATTCGATAAT GCGGGGA TAA TCCCCGC TATTTTCACCCCTTG Ssed_4248 5218922 - 5217924 - | hypothetical protein Ssed_4249 5221115 - 5219352 - | phage integrase TERM 5149 5221244 - 5221210 - R 90 -10.8 -4.14056 | opp_overlap 5221213 5221218, overlap 5221213 5221215 ATTTGAAATGAGAAA TCAGACAACTGCTTGC AGA ACAAGCAGTTGTCTTC ATCCAAAGAGTAAGC TERM 5150 5221241 - 5221213 - R 100 -16.9 -3.09007 | opp_overlap 5221213 5221218, overlap 5221210 5221215 TGAAATGAGAAATCA GACAACTGCTTGC AGA ACAAGCAGTTGTC TTCATCCAAAGAGTA TERM 5151 5221213 - 5221241 + r 100 -16.2 -3.14344 | opp_overlap 5221213 5221210 5221215, overlap 5221218 TGAAATGAGAAATCA GACAACTGCTTG CAGAA CAAGCAGTTGTC TTCATCCAAAGAGTA TERM 5152 5221239 - 5221215 - R 93 -13.7 -3.09128 | opp_overlap 5221213 5221218, overlap 5221213 5221210 AAATGAGAAATCAGA CAACTGCTTGC AGA ACAAGCAGTTG TCTTCATCCAAAGAG TERM 5153 5221218 - 5221236 + r 76 -8.9 -3.71284 | opp_overlap 5221215 5221213 5221210, overlap 5221213 TGAGAAATCAGACAA CTGCTTG CAGAA CAAGCAG TTGTCTTCATCCAAA Ssed_4250 5222520 - 5221678 - | uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase TERM 5154 5222319 - 5222354 + g 87 -5.4 -5.42164 | gap 1, overlap 5222311 TCTGAATGATCCAAT CGGCTCTGTCTCGTTCA TTG TGATCGTGA-AGGGCTG TTTTTCTTGTTTCTA Ssed_4251 5222608 - 5224488 + | LppC family lipoprotein TERM 5155 5224685 - 5224675 - g 77 -6.8 -4.58663 | overlap 5224680 AGTATCGCTCAAAAA GCCA ATA TGGC GGCGCCATAAATGCG Ssed_4252 5224485 - 5224838 + | hypothetical protein Ssed_4253 5224911 - 5225504 + | phosphoheptose isomerase TERM 5156 5225803 - 5225781 - g 85 -6.2 -5.1615 | overlap 5225792 GGAAGATGTAAAAAA CCAAGCCAAT ATA ACCGGCGTGG TCATGAATGGTAATG Ssed_4254 5225593 - 5226162 + | transport-associated Ssed_4255 5227089 - 5226202 - | hypothetical protein Ssed_4256 5227218 - 5228093 + | LysR family transcriptional regulator TERM 5157 5228141 - 5228111 - T 81 -11.3 -2.92642 | opp_overlap 5228118, overlap 5228118 AGCACGAGTCAGACA CAAAAAAGCCGAC ACGTG GTCGGCTTTTTCA GGATGAGACAGTGTC TERM 5158 5228134 - 5228118 - T 100 -9.4 -5.4251 | opp_overlap 5228118, overlap 5228111 GTCAGACACAAAAAA GCCGAC ACGTG GTCGGC TTTTTCAGGATGAGA TERM 5159 5228118 - 5228134 + T 91 -9.4 -4.59773 | opp_overlap 5228118 5228111 GTCAGACACAAAAAA GCCGAC ACGTG GTCGGC TTTTTCAGGATGAGA TERM 5160 5228197 - 5228180 - T 70 -8.5 -3.43081 | opp_overlap 5228180 5228179 5228173, overlap 5228178 5228171 AGATAAGTGGAAACA GGCTTAT ACTA ATAAGCC AATTTTCTCATATAC Ssed_4257 5229190 - 5228183 - | tryptophanyl-tRNA synthetase TERM 5161 5228256 - 5228283 + g 85 -10.6 -3.99275 | TGAGCCTTCTCAGCC CCCTCTTGCATC ACTT GATGCAGGAAGG TTTGATCTTCTCTGA Ssed_4258 5229894 - 5229187 - | phosphoglycolate phosphatase TERM 5162 5229886 - 5229908 + g 73 -7 -4.19817 | TTTAAGTTTTCCCCA GCGACTCATG AAT TATGACTCGC TTTTAGCTAACTCGA Ssed_4259 5230572 - 5229898 - | ribulose-phosphate 3-epimerase Ssed_4260 5230781 - 5231140 + | hypothetical protein Ssed_4261 5231176 - 5231337 + | hypothetical protein Ssed_4262 5232230 - 5231391 - | site-specific DNA-methyltransferase (adenine-specific) Ssed_4263 5233731 - 5232280 - | sporulation domain-containing protein Ssed_4264 5234825 - 5233749 - | 3-dehydroquinate synthase Ssed_4265 5235349 - 5234834 - | shikimate kinase I TERM 5163 5235551 - 5235523 - R 100 -18.3 -3.65812 | opp_overlap 5235527, overlap 5235527 GTCTTTTGAACAGAA GAAAGCCAGCGCT GTA AGCACTGGCTTTC TCATGAAACATTATC TERM 5164 5235547 - 5235527 - R 100 -13.3 -4.46073 | opp_overlap 5235527, overlap 5235523 TTTGAACAGAAGAAA GCCAGCGCT GTA AGCACTGGC TTTCTCATGAAACAT TERM 5165 5235527 - 5235547 + r 86 -11.1 -3.96327 | opp_overlap 5235527 5235523 TTTGAACAGAAGAAA GCCAGCGCT GTA AGCACTGGC TTTCTCATGAAACAT Ssed_4266 5237618 - 5235570 - | type IV pilus secretin PilQ TERM 5166 5237119 - 5237131 + g 76 -9.1 -3.80733 | ACCAGTAGCTCTCCT CCTCC GTC GGAGG TTCTTCTAAAATCAA Ssed_4267 5238155 - 5237640 - | methyl-accepting chemotaxis sensory transducer Ssed_4268 5238778 - 5238158 - | pilus assembly protein, PilO Ssed_4269 5239353 - 5238775 - | fimbrial assembly family protein Ssed_4270 5240420 - 5239341 - | type IV pilus assembly protein PilM TERM 5167 5240966 - 5240949 - g 79 -3.3 -5.2422 | overlap 5240951 AACCACAGGAAAAAA GAGCCAG GGGG CTAGCAC CATCACCCAGCAGGT Ssed_4271 5240608 - 5243139 + | peptidoglycan glycosyltransferase TERM 5168 5243205 - 5243168 - T 95 -13.6 -3.55191 | opp_overlap 5243173, overlap 5243157 5243173 CTAAGCTTATAAATA TAAAAGCGCGATAGAG TAAAAT CTCCATCGCGCTTTTT TTAAAAATCCAAAAT TERM 5169 5243200 - 5243173 - T 100 -13.5 -4.84918 | opp_overlap 5243173, overlap 5243157 5243168 CTTATAAATATAAAA GCGCGATAGAG TAAAAT CTCCATCGCGC TTTTTTTAAAAATCC TERM 5170 5243173 - 5243200 + T 100 -11.3 -5.42259 | opp_overlap 5243157 5243173 5243168 CTTATAAATATAAAA GCGCGATAGAG TAAAAT CTCCATCGCGC TTTTTTTAAAAATCC Ssed_4272 5244652 - 5243279 - | argininosuccinate lyase Ssed_4273 5245989 - 5244766 - | argininosuccinate synthase TERM 5171 5246017 - 5246034 + r 72 -9.9 -2.99842 | ATTCTTGCTACGGTT TCGTCGA AAAA TCGACGA TATGTAAATTGTTTT Ssed_4274 5246956 - 5246048 - | ornithine carbamoyltransferase Ssed_4275 5247864 - 5247073 - | acetylglutamate kinase TERM 5172 5247831 - 5247842 + g 70 -2.2 -4.93877 | CACCACCAACCTTTA GTAC TAAC GTGC TTTTATTTACTGACA Ssed_4276 5248867 - 5247887 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 5173 5247995 - 5248013 + g 71 -8.8 -3.66803 | opp_overlap 5247995 AGTCTCTGGATCGAA CTTCCACC CCA GGTGGCAG TTTGGAGTGTTAACG TERM 5174 5248650 - 5248665 + g 85 -7.6 -4.68593 | ACCACCGCATCGGCC TGCTCA ACAA TGAGCA TTTTTGCGTCATCAC Ssed_4277 5249133 - 5250284 + | acetylornithine deacetylase Ssed_4278 5250464 - 5253100 + | phosphoenolpyruvate carboxylase Ssed_4279 5253100 - 5253639 + | hypothetical protein TERM 5175 5253668 - 5253698 + T 83 -9.2 -4.12902 | opp_overlap 5253668, overlap 5253696 ATTAATAGGTTAATA TGCCATTAATGA CCAAGAC TCGTTAATGGCA TTTTCAAACTGCTTG Ssed_4280 5254990 - 5253716 - | competence/damage-inducible protein CinA TERM 5176 5255506 - 5255484 - R 100 -10.6 -5.24989 | opp_overlap 5255484 GTATATACGAAAAAA GCCCTAGC GTTTTCT GCTAGGGC TTTATCGTTATTAGG TERM 5177 5255484 - 5255506 + r 93 -11.3 -4.14257 | opp_overlap 5255484 GTATATACGAAAAAA GCCCTAGCG TTTTC TGCTAGGGC TTTATCGTTATTAGG TERM 5178 5256856 - 5256867 + r 72 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 5179 5257363 - 5257379 + r 75 -8 -4.08546 | overlap 5257352 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 5180 5258161 - 5258173 + r 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5181 5260653 - 5260670 + r 72 -8.5 -3.61178 | GAGTAAAATTTTTGA CTACTTC GTGA GAAGTAG TTTCGAATAACTCAA TERM 5182 5261225 - 5261171 - R 95 -13.8 -3.73647 | opp_overlap 5261187 5261191, overlap 5261182 5261187 5261191 5261219 TTTACTCATTAATAA CGTCTTATAGATTGAAGAAAGGGACC AGA GGTCCCTTTCTTCAATCTAGATAATC CTGATTTAAGGCTTA TERM 5183 5261214 - 5261182 - R 100 -22.3 -2.88758 | opp_overlap 5261187 5261191, overlap 5261171 5261187 5261191 ATAACGTCTTATAGA TTGAAGAAAGGGACC AGA GGTCCCTTTCTTCAA TCTAGATAATCCTGA TERM 5184 5261187 - 5261209 + r 100 -16.4 -3.13728 | opp_overlap 5261182 5261171 5261187 5261191, overlap 5261191 GTCTTATAGATTGAA GAAAGGGACC AGA GGTCCCTTTC TTCAATCTAGATAAT TERM 5185 5261209 - 5261187 - R 100 -16.4 -3.15999 | opp_overlap 5261187 5261191, overlap 5261182 5261171 5261191 GTCTTATAGATTGAA GAAAGGGACC AGA GGTCCCTTTC TTCAATCTAGATAAT TERM 5186 5261205 - 5261191 - R 93 -11.4 -4.24285 | opp_overlap 5261187 5261191, overlap 5261187 5261182 5261171 TATAGATTGAAGAAA GGGACC AGA GGTCCC TTTCTTCAATCTAGA TERM 5187 5261191 - 5261205 + r 93 -11.4 -4.23213 | opp_overlap 5261191 5261187 5261182 5261171, overlap 5261187 TATAGATTGAAGAAA GGGACC AGA GGTCCC TTTCTTCAATCTAGA Ssed_4281 5261809 - 5261231 - | redoxin domain-containing protein TERM 5188 5261700 - 5261710 + g 100 -6.8 -5.81412 | ATACTGGACTGACTC GCAG CTT CTGC TTTTTTTTGCATACC TERM 5189 5261788 - 5261764 - G 75 -11.5 -2.62757 | opp_overlap 5261775 5261779, overlap 5261761 5261779 CAGATAACGAACCTA GTGCCAACAGT GAA ACCGTTAGCAC ACTAGCTAACCGTTT TERM 5190 5261775 - 5261804 + g 74 -9.4 -3.64299 | opp_overlap 5261764 5261761 5261779, overlap 5261779 CCTAGTGCCAACAGT GAAACCGTTAGC ACACTA GCTAACCGTTTC TTCATTTATCATCTC Ssed_4282 5262288 - 5261806 - | cytochrome c biogenesis protein Ssed_4283 5262842 - 5262285 - | periplasmic protein thiol--disulphide oxidoreductase DsbE TERM 5191 5262741 - 5262700 - G 78 -11.5 -3.02144 | opp_overlap 5262715 5262740, overlap 5262715 CCACGGTCCTCAAGA CGCTCTAGCTGGAAAGCCG GTAT CGGCTTTCCCTCCAGTGCA GAGTCTAGATTCTGT Ssed_4284 5264839 - 5262860 - | cytochrome c-type biogenesis protein CcmF TERM 5192 5265205 - 5265219 + H 90 -7.1 -5.28778 | TCCTATCCCTATCCC TGCGG TGTAT CCGCA TTTTTTGTAACTAAT Ssed_4285 5265249 - 5266496 + | TPR repeat-containing protein TERM 5193 5266520 - 5266537 + T 100 -12.7 -5.0538 | opp_overlap 5266520 AATTGATATATTAAA GGCCTGC TTCT GCAGGCC TTTTTTGCGCTCAAA TERM 5194 5266537 - 5266520 - T 93 -12.7 -3.89614 | opp_overlap 5266520 AATTGATATATTAAA GGCCTGC TTCT GCAGGCC TTTTTTGCGCTCAAA TERM 5195 5266556 - 5266597 + T 100 -16.1 -3.14344 | opp_overlap 5266562 5266570, overlap 5266570 TTTGCGCTCAAATTT GAGAGACAAAAAAACCGGC ATCG GCCGGTTTTTTTATGTCTC TTGATAAGAGAGCTA TERM 5196 5266591 - 5266562 - T 95 -14.5 -2.9348 | opp_overlap 5266556 5266570, overlap 5266570 CTCAAATTTGAGAGA CAAAAAAACCGGC ATCG GCCGGTTTTTTTA TGTCTCTTGATAAGA TERM 5197 5266570 - 5266583 + T 100 -9.5 -5.77988 | opp_overlap 5266570 5266562, overlap 5266556 TGAGAGACAAAAAAA CCGGC ATCG GCCGG TTTTTTTATGTCTCT TERM 5198 5266583 - 5266570 - T 100 -9.5 -5.76633 | opp_overlap 5266556 5266570, overlap 5266562 TGAGAGACAAAAAAA CCGGC ATCG GCCGG TTTTTTTATGTCTCT Ssed_4286 5266915 - 5266622 - | cytochrome c, class I Ssed_4287 5267262 - 5267912 + | cytochrome c biogenesis protein CcmA TERM 5199 5268432 - 5268414 - g 76 -8.8 -4.10164 | opp_overlap 5268411 5268414 GTAGGATTACATAAA GGCGGAGT GTT ACTCAGCC TGCTTATCCTGCCTT Ssed_4288 5267922 - 5268608 + | heme exporter protein CcmB Ssed_4289 5268610 - 5269356 + | heme exporter protein CcmC Ssed_4290 5269356 - 5269553 + | heme exporter protein D (CcmD) TERM 5200 5269916 - 5269931 + G 73 -7.6 -4.07885 | ATTGAAGGCGGTAAG CTTCAG GCGA CTGAAG TTTTAGCAAAACATG Ssed_4291 5269553 - 5270038 + | cytochrome c-type biogenesis protein CcmE TERM 5201 5270086 - 5270101 + F 100 -10.4 -5.28176 | opp_overlap 5270086 TCGAACTTCTAAGAA GGCCTC GCAA GAGGCC TTTTTTATGCCTGAC TERM 5202 5270101 - 5270086 - f 80 -10.4 -3.65314 | opp_overlap 5270086 TCGAACTTCTAAGAA GGCCTC GCAA GAGGCC TTTTTTATGCCTGAC TERM 5203 5270386 - 5270398 + G 71 -9.1 -3.55622 | opp_overlap 5270385 5270386 TGCCAGGGCTGAAAG CGCCT GGG AGGCG TTTGAGAAGCTTAAG Ssed_4292 5270108 - 5271148 + | hypothetical protein TERM 5204 5271222 - 5271183 - T 100 -14.4 -3.28269 | opp_overlap 5271194, overlap 5271187 5271194 AAGCGGTAAATTCAA CACATAAAAAAGCCGGGC GTTA GCCCGGCTTTTTAAAATG AAATACCTTAATTAC TERM 5205 5271218 - 5271187 - T 100 -16 -3.16217 | opp_overlap 5271194, overlap 5271183 5271194 GGTAAATTCAACACA TAAAAAAGCCGGGC GTTA GCCCGGCTTTTTAA AATGAAATACCTTAA TERM 5206 5271211 - 5271194 - T 100 -14.1 -5.47431 | opp_overlap 5271194, overlap 5271187 5271183 TCAACACATAAAAAA GCCGGGC GTTA GCCCGGC TTTTTAAAATGAAAT TERM 5207 5271194 - 5271211 + T 100 -14.1 -4.62336 | opp_overlap 5271194 5271187 5271183 TCAACACATAAAAAA GCCGGGC GTTA GCCCGGC TTTTTAAAATGAAAT Ssed_4293 5271632 - 5271234 - | 50S ribosomal protein L17 TERM 5208 5271310 - 5271300 - G 77 -8.2 -4.19336 | opp_overlap 5271299 5271300 AACTAGTTCAATAAA CGCC ATA GGCG CTTTATCACCAGTAC Ssed_4294 5272661 - 5271672 - | DNA-directed RNA polymerase subunit alpha TERM 5209 5272653 - 5272641 - G 71 -6.3 -4.15222 | ACGCGGTCTAAGAAA TTCTG TAA CAGAA CCCTGCATTGTGTCC Ssed_4295 5273306 - 5272686 - | 30S ribosomal protein S4 TERM 5210 5273353 - 5273335 - R 72 -4.4 -4.7373 | opp_overlap 5273335 CTATCCTATTAAAAA CGACGAGT TAT ACGCGACG TTTCTTAGGAGGACG Ssed_4296 5273734 - 5273342 - | 30S ribosomal protein S11 Ssed_4297 5274105 - 5273749 - | 30S ribosomal protein S13 TERM 5211 5274026 - 5273996 - G 74 -9.1 -3.71284 | gap 1 TCTTCAGCAATAGAA GTAGTCGCGC-AGA TTGC TCTAGCGCGAGTAC GACCGATACCGAAGA TERM 5212 5274184 - 5274216 + r 89 -9.2 -4.66833 | opp_overlap 5274185 5274186, overlap 5274186 AGTTTTGCAAATAAA ATTTTGTTCAGCCC GAACA GGGCTGAACAAATG TTTTTAGCCTTGACG TERM 5213 5274215 - 5274185 - R 100 -12.7 -4.86731 | opp_overlap 5274184 5274186, overlap 5274186 GTTTTGCAAATAAAA TTTTGTTCAGCCC GAACA GGGCTGAACAAAT GTTTTTAGCCTTGAC TERM 5214 5274214 - 5274186 - R 100 -16.2 -3.51557 | opp_overlap 5274184 5274186, overlap 5274185 TTTTGCAAATAAAAT TTTGTTCAGCCC GAACA GGGCTGAACAAA TGTTTTTAGCCTTGA TERM 5215 5274186 - 5274214 + r 100 -16.2 -3.94933 | opp_overlap 5274186 5274185, overlap 5274184 TTTTGCAAATAAAAT TTTGTTCAGCCC GAACA GGGCTGAACAAA TGTTTTTAGCCTTGA Ssed_4298 5275697 - 5274357 - | preprotein translocase subunit SecY TERM 5216 5275278 - 5275243 - G 72 -6.2 -4.40184 | opp_overlap 5275267, overlap 5275248 5275262 GCAACGAAATAGAAA CCAAATCCAAGGTTTA CAAC TAAACCTGGAACTAGG TTTGGCAGACCCGTT TERM 5217 5275272 - 5275248 - G 71 -6.6 -4.23732 | gap 1, opp_overlap 5275267, overlap 5275243 5275262 GAAATAGAAACCAAA TCCAAGGTTTA CAAC TAAACCT-GGA ACTAGGTTTGGCAGA Ssed_4299 5276139 - 5275705 - | 50S ribosomal protein L15 TERM 5218 5276032 - 5276051 + g 73 -7.9 -4.11692 | opp_overlap 5275998 ACGAGACTTCTGACC CTTGTGG CCGCGA CCACAAG TTTTACCAGTGCCTG Ssed_4300 5276836 - 5276333 - | 30S ribosomal protein S5 Ssed_4301 5277200 - 5276850 - | 50S ribosomal protein L18 TERM 5219 5277147 - 5277187 + g 83 -7 -4.79955 | gap 2, overlap 5277149 AACGCCCAGCTCTTG GATCTT-CTTACGC-GCGCG AGT TGCGCGGCGTAAGCGAGATG TTTTCTTATCCATAT TERM 5220 5277149 - 5277185 + g 81 -9.6 -4.01115 | gap 2, overlap 5277147 CGCCCAGCTCTTGGA TCTT-CTTACGC-GCGCG AGT TGCGCGGCGTAAGCGAGA TGTTTTCTTATCCAT Ssed_4302 5277741 - 5277211 - | 50S ribosomal protein L6 Ssed_4303 5278144 - 5277752 - | 30S ribosomal protein S8 Ssed_4304 5278474 - 5278169 - | 30S ribosomal protein S14 Ssed_4305 5279024 - 5278485 - | 50S ribosomal protein L5 Ssed_4306 5279351 - 5279037 - | 50S ribosomal protein L24 Ssed_4307 5279730 - 5279362 - | 50S ribosomal protein L14 TERM 5221 5279866 - 5279884 + r 89 -11.7 -3.75332 | opp_overlap 5279866 GTGTTAAAATAAAAA CGGCTCC CAAAA GGAGCCG TTTAGCTTAAAACCT TERM 5222 5279884 - 5279866 - R 100 -12.4 -5.45802 | opp_overlap 5279866 GTGTTAAAATAAAAA CGGCTCCC AAA AGGAGCCG TTTAGCTTAAAACCT TERM 5223 5279911 - 5279897 - R 79 -8.6 -4.13767 | opp_overlap 5279896 5279897 CCGTTTAGCTTAAAA CCTAAG AAG CTTAGG CTTTAGATACTACTT Ssed_4308 5280155 - 5279907 - | ribosomal protein S17 TERM 5224 5279955 - 5279935 - G 71 -10.5 -2.91452 | opp_overlap 5279931 ACTACTTCAACCAGA GTCCAAGAC TTA GTCTTAGAC AGCGGACGGCATTCG Ssed_4309 5280346 - 5280155 - | 50S ribosomal protein L29 Ssed_4310 5280756 - 5280346 - | 50S ribosomal protein L16 Ssed_4311 5281457 - 5280768 - | 30S ribosomal protein S3 Ssed_4312 5281799 - 5281467 - | 50S ribosomal protein L22 Ssed_4313 5282093 - 5281815 - | 30S ribosomal protein S19 Ssed_4314 5282932 - 5282105 - | 50S ribosomal protein L2 Ssed_4315 5283248 - 5282949 - | 50S ribosomal protein L23 Ssed_4316 5283850 - 5283245 - | 50S ribosomal protein L4 Ssed_4317 5284505 - 5283867 - | 50S ribosomal protein L3 Ssed_4318 5284832 - 5284521 - | ribosomal protein S10 TERM 5225 5284904 - 5284866 - R 78 -2.5 -5.4251 | gap 2, overlap 5284869 TGGACACATAAAAAA TCACCCTCTTGCACTTCCA TAT TGGAA-CGC-AGAGCGAGA TGATTTAACCGTTCG TERM 5226 5285151 - 5285182 + r 79 -11 -3.15056 | opp_overlap 5285152 5285159, overlap 5285159 GATAAATTATAGGCA ATAAAAAAGGCAGC CTAA GCTGCCTTTTTTGA TATTGAGTTAAGACT TERM 5227 5285181 - 5285152 - R 85 -12.3 -3.18126 | opp_overlap 5285151 5285159, overlap 5285159 ATAAATTATAGGCAA TAAAAAAGGCAGC CTAA GCTGCCTTTTTTG ATATTGAGTTAAGAC TERM 5228 5285174 - 5285159 - R 100 -10.4 -5.49234 | opp_overlap 5285151 5285159, overlap 5285152 ATAGGCAATAAAAAA GGCAGC CTAA GCTGCC TTTTTTGATATTGAG TERM 5229 5285159 - 5285174 + r 100 -10.4 -5.27779 | opp_overlap 5285159 5285152, overlap 5285151 ATAGGCAATAAAAAA GGCAGC CTAA GCTGCC TTTTTTGATATTGAG Ssed_4319 5286390 - 5285206 - | elongation factor Tu TERM 5230 5286434 - 5286415 - R 84 -10 -3.85698 | CTTTCTTTTCAGAAA TGCTCGGC TATA ACCGAGCA ATAGCAATTAATTTA TERM 5231 5286491 - 5286456 - R 73 -7.1 -4.09509 | gap 3, opp_overlap 5286464 ATTAATTTATACAAA TATGGCAAGC-CG-GGCT ATT AGCCACGAGCTT-CCATA ATCGCTTTAGCAATG Ssed_4320 5288569 - 5286473 - | elongation factor G TERM 5232 5286552 - 5286536 - G 75 -5.9 -4.63928 | AGAGTACTTCAAAAA CTCCATA GAG TATGAAG CGCGCCCCTGAGATG TERM 5233 5287638 - 5287652 + g 70 -10 -3.12353 | overlap 5287636 5287633 5287648 GAAAAAGGCGCATTA TCGTCC GCA GGACGA TCTGTCTCTTGATCT TERM 5234 5288641 - 5288614 - R 100 -14.2 -3.41125 | overlap 5288616 CTTAGAGATGTAGAA TATGGAGCTGGC AAAT GCCAGCTCCATC AGATTACCAGCGGTA TERM 5235 5288639 - 5288616 - R 100 -16.8 -3.27436 | overlap 5288614 TAGAGATGTAGAATA TGGAGCTGGC AAAT GCCAGCTCCA TCAGATTACCAGCGG Ssed_4321 5289115 - 5288645 - | 30S ribosomal protein S7 Ssed_4322 5289570 - 5289196 - | 30S ribosomal protein S12 TERM 5236 5289727 - 5289713 - R 100 -12.8 -6.00814 | opp_overlap 5289713 AATAAGTAAAAAAAA GGCGCC AAA GGCGCC TTTTTAACATCCTAT TERM 5237 5289713 - 5289727 + r 100 -12.8 -4.63928 | opp_overlap 5289713 AATAAGTAAAAAAAA GGCGCC AAA GGCGCC TTTTTAACATCCTAT Ssed_4323 5293978 - 5289761 - | DNA-directed RNA polymerase subunit beta' TERM 5238 5289964 - 5289991 + g 72 -10.6 -3.03701 | gap 1, overlap 5289960 GCTTATCACTCTTAC CGCCTACTG-CCG CTT CGGTCAGTACGCG TGTCGTTTCCTGGAA Ssed_4324 5298090 - 5294059 - | DNA-directed RNA polymerase, beta subunit TERM 5239 5296767 - 5296795 + g 78 -6.1 -4.72272 | opp_overlap 5296764, overlap 5296766 CGATATCATCAACTT CATCATTACCATT ACG GATAGTGATGATG TTTTTCATAACAGCA TERM 5240 5298289 - 5298264 - R 100 -13.3 -5.07567 | TTACAGCGCAAAAAA GGCCGACGGTT AAAA AACCGCCAGCC TTCACCCGATTACTC Ssed_4325 5298697 - 5298329 - | ribosomal protein L7/L12 TERM 5241 5298728 - 5298752 + r 70 -5.8 -4.33997 | gap 1, opp_overlap 5298728, overlap 5298725 TTGTTCTGAATTTAA GCGGC-TAAGT ATAA ACTTAAGCTGC TTCTTCTTTTTGATC Ssed_4326 5299244 - 5298744 - | 50S ribosomal protein L10 TERM 5242 5299457 - 5299423 - R 72 -9.5 -3.05384 | gap 1 CGGTCTTGGACGGAA GCCTATACATTTACCC AAAA GGTTAAATG-ATAGGC CCCAACCCACAAAGT Ssed_4327 5300210 - 5299509 - | ribosomal protein L1 Ssed_4328 5300643 - 5300215 - | 50S ribosomal protein L11 TERM 5243 5300739 - 5300708 - R 95 -11.7 -4.17048 | GCTCCCCGAAAATAA TGGGTGCGGATTT TACAAC AAATCAGCACCCA GTCCAAATACTTTTT Ssed_4329 5301319 - 5300768 - | NusG antitermination factor Ssed_4330 5301700 - 5301329 - | preprotein translocase subunit SecE TERM 5244 5301938 - 5301907 - H 100 -9.6 -5.74122 | opp_overlap 5301910 5301915, overlap 5301915 TAGCATATAAAAAAA CAAAAAAAGGAAGC CGAA GCTTCCTTTTCTTT AGTGTCTTCTCAGAT TERM 5245 5301910 - 5301935 + H 79 -9.1 -3.95449 | opp_overlap 5301907 5301915, overlap 5301915 CATATAAAAAAACAA AAAAAGGAAGC CGAA GCTTCCTTTTC TTTAGTGTCTTCTCA TERM 5246 5301915 - 5301930 + H 90 -9 -4.98061 | opp_overlap 5301915 5301907, overlap 5301910 AAAAAAACAAAAAAA GGAAGC CGAA GCTTCC TTTTCTTTAGTGTCT TERM 5247 5301930 - 5301915 - H 100 -9 -6.32976 | opp_overlap 5301910 5301915, overlap 5301907 AAAAAAACAAAAAAA GGAAGC CGAA GCTTCC TTTTCTTTAGTGTCT TERM 5248 5303221 - 5303199 - H 83 -3.5 -5.62045 | gap 1, overlap 5303201 ACATATAACAAAAAA TCCGATG-CA TAAA TGTCATCGAA TCAATTATTGTTGTC TERM 5249 5303552 - 5303539 - H 71 -6.7 -4.03413 | ACCCCTCCAGAGAAA TGGTG CCGG CACCA AGAGTCGAACTCGGG TERM 5250 5303773 - 5303785 + H 75 -7.7 -4.01135 | CTATATAAACATCTC GCTGA AAG TCAGC TTTAATATTGTTCGA Ssed_4333 5303845 - 5304795 + | pantothenate kinase TERM 5251 5304809 - 5304822 + T 70 -8.1 -3.67134 | opp_overlap 5304809 5304800 AATAAATTGCCAGAA GCGCT AGAC AGCGC TTCTTAGACTGATTT Ssed_4334 5305774 - 5304812 - | biotin--protein ligase TERM 5252 5305733 - 5305750 + g 74 -4.1 -4.90525 | gap 1, overlap 5305732 5305736 GCCTCCGGAGTTAAG CGTCGCTA TGA TGGCG-CG TTTTCTTTCCCATTG Ssed_4335 5306801 - 5305767 - | UDP-N-acetylmuramate dehydrogenase TERM 5253 5307045 - 5307028 - H 79 -4.9 -5.06735 | opp_overlap 5307028 CACAAACGAGAAAAA CCTAACA TTGA TGTTAAG GCTTATCGTAATGTT TERM 5254 5307316 - 5307281 - H 95 -15.6 -2.76261 | opp_overlap 5307281 5307288, overlap 5307288 CTTTAATTCCTAAAC GAAAAAAGCCTCTGCA TTGC TGCAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5255 5307281 - 5307316 + H 100 -13.4 -4.1891 | opp_overlap 5307281 5307288, overlap 5307288 CTTTAATTCCTAAAC GAAAAAAGCCTCTGCA TTGC TGCAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5256 5307309 - 5307288 - H 100 -14.5 -5.37593 | opp_overlap 5307281 5307288, overlap 5307281 TCCTAAACGAAAAAA GCCTCTGCA TTGC TGCAGAGGC TTTCGTCTTTGTGTT TERM 5257 5307288 - 5307309 + H 100 -14.5 -4.07089 | opp_overlap 5307288 5307281, overlap 5307281 TCCTAAACGAAAAAA GCCTCTGCA TTGC TGCAGAGGC TTTCGTCTTTGTGTT TERM 5258 5308865 - 5308876 + H 72 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 5259 5309372 - 5309388 + H 75 -8 -4.08546 | overlap 5309361 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 5260 5310170 - 5310182 + H 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5261 5310916 - 5310948 + H 81 -11.5 -3.00022 | opp_overlap 5310905 5310917, overlap 5310923 GAACGGGCTTAAAAA AGCCAAAGATAAATT ATT AGTTTATCTTTGGCA TCTCTATCCAATGCA TERM 5262 5310947 - 5310917 - H 100 -12.8 -5.01732 | opp_overlap 5310916 5310923, overlap 5310905 AACGGGCTTAAAAAA GCCAAAGATAAATT ATT AGTTTATCTTTGGC ATCTCTATCCAATGC TERM 5263 5312963 - 5312980 + H 72 -8.5 -3.61178 | GAGTAAAATTTTTGA CTACTTC GTGA GAAGTAG TTTCGAATAACTCAA Ssed_4336 5313552 - 5314019 + | RNP-1-like RNA-binding protein Ssed_4337 5314896 - 5314048 - | glutamate racemase Ssed_4338 5315003 - 5316100 + | tRNA (uracil-5-)-methyltransferase TERM 5264 5316151 - 5316138 - T 100 -5.9 -5.71712 | opp_overlap 5316130 5316138 TTCCAGACAAAAAAA GGGCC AATG AGCCC TTTTTTTATCTCTAC TERM 5265 5316138 - 5316151 + T 100 -5.2 -5.76633 | opp_overlap 5316138, overlap 5316130 TTCCAGACAAAAAAA GGGC CAATGA GCCC TTTTTTTATCTCTAC Ssed_4339 5316834 - 5316217 - | DNA-binding transcriptional repressor FabR Ssed_4340 5316987 - 5318105 + | stearoyl-CoA 9-desaturase TERM 5266 5318130 - 5318151 + F 80 -10.1 -3.63968 | AAGCGCAATACAGTC CGGCCATCG AAGG TGGTGGCCG TTTGAACGTTTAGCC Ssed_4341 5318306 - 5319346 + | selenide, water dikinase TERM 5267 5320297 - 5320285 - g 74 -9.1 -3.69482 | GCACTCAATATACAA CGCCA GCG TGGCG ATACTCAGCCGCATA Ssed_4342 5319346 - 5320455 + | tRNA 2-selenouridine synthase TERM 5268 5320486 - 5320511 + T 80 -7.7 -4.42806 | opp_overlap 5320486 5320484 5320482 CATGCTGAAAACAGA GAGCCTTTA CTATTTGT TAAAGGCTC TTTCTTTAACGGTCC Ssed_4343 5322286 - 5320517 - | phospholipid/glycerol acyltransferase TERM 5269 5321631 - 5321641 + g 77 -6.8 -4.50583 | ATCCATATAGAGGGA GTGC GTT GCAC TTTTCTGATGCTATT Ssed_4344 5322764 - 5322318 - | GCN5-related N-acetyltransferase Ssed_4345 5323569 - 5322757 - | 3'(2'),5'-bisphosphate nucleotidase Ssed_4346 5324171 - 5323626 - | ADP-ribose diphosphatase NudE Ssed_4347 5324260 - 5324925 + | HAD family hydrolase TERM 5270 5325180 - 5325123 - T 79 -11 -3.11564 | gap 2, opp_overlap 5325145, overlap 5325145 TAAATGTAGGGAACA TTTATTGGCCAGACACAAAAAAGGCACT GTTT AGTGCC-TTTTTGAAACTG-CCAATAAA GAGAAAGTCCTCAGT TERM 5271 5325145 - 5325160 + T 88 -9 -4.59773 | opp_overlap 5325123 5325145 GCCAGACACAAAAAA GGCACT GTTT AGTGCC TTTTTGAAACTGCCA TERM 5272 5325160 - 5325145 - T 95 -9 -5.4251 | opp_overlap 5325145, overlap 5325123 GCCAGACACAAAAAA GGCACT GTTT AGTGCC TTTTTGAAACTGCCA Ssed_4348 5325954 - 5325196 - | type II secretion system protein N Ssed_4349 5326511 - 5326035 - | general secretion pathway M protein Ssed_4350 5327712 - 5326513 - | general secretion pathway protein L TERM 5273 5327741 - 5327753 + r 74 -4.1 -5.093 | opp_overlap 5327723, overlap 5327723 CATCAAATCACCCGA TGAGG TTA TCTCA TTTTATTCTTTTACC Ssed_4351 5328791 - 5327793 - | general secretion pathway protein K Ssed_4352 5329543 - 5328791 - | general secretion pathway protein J TERM 5274 5329017 - 5329027 + g 77 -6.8 -4.53705 | GCCTTCGGCAGCTTA GTCG CAT CGAC TTTTCTCTCCCACTT Ssed_4353 5329895 - 5329524 - | general secretion pathway protein I Ssed_4354 5330551 - 5329979 - | general secretion pathway protein H Ssed_4355 5331015 - 5330581 - | general secretion pathway protein G Ssed_4356 5332386 - 5331163 - | general secretion pathway protein F Ssed_4357 5333964 - 5332390 - | general secretory pathway protein E Ssed_4358 5336128 - 5333954 - | general secretion pathway protein D Ssed_4359 5337065 - 5336154 - | general secretion pathway protein C Ssed_4360 5337323 - 5337721 + | RNA-binding S4 domain-containing protein Ssed_4361 5337834 - 5338694 + | Hsp33-like chaperonin TERM 5275 5338748 - 5338717 - f 91 -13.8 -2.68072 | opp_overlap 5338722, overlap 5338722 GTGACCACAATGAAT GAAAAGAGGGCGCC CGTG AGCGCCCTCTTTTT TTAGTCAAAAACACG TERM 5276 5338722 - 5338743 + F 100 -13 -5.52384 | opp_overlap 5338717 5338722 CACAATGAATGAAAA GAGGGCGC CCGTGA GCGCCCTC TTTTTTTAGTCAAAA TERM 5277 5338743 - 5338722 - f 100 -13.7 -4.51197 | opp_overlap 5338722, overlap 5338717 CACAATGAATGAAAA GAGGGCGCC CGTG AGCGCCCTC TTTTTTTAGTCAAAA TERM 5278 5339029 - 5339014 - g 75 -6.1 -4.60487 | overlap 5339016 CACTAGTCGCAAAAA CCGGT GAACGT ACCGG GCGCTCGCCTAACGA Ssed_4362 5338899 - 5340440 + | phosphoenolpyruvate carboxykinase TERM 5279 5340515 - 5340480 - f 100 -17.8 -3.71804 | opp_overlap 5340485, overlap 5340485 TTAAATGTTAAAACA TAAAATCCCAGTCTGG TACT CCAGACTGGGATTTTT TATTGCTTTCGGTTT TERM 5280 5340485 - 5340510 + F 100 -17.7 -5.59655 | opp_overlap 5340480 5340485 TGTTAAAACATAAAA TCCCAGTCTGG TACT CCAGACTGGGA TTTTTTATTGCTTTC TERM 5281 5340510 - 5340485 - f 100 -17.7 -4.89567 | opp_overlap 5340485, overlap 5340480 TGTTAAAACATAAAA TCCCAGTCTGG TACT CCAGACTGGGA TTTTTTATTGCTTTC Ssed_4363 5340810 - 5341232 + | hypothetical protein Ssed_4364 5341240 - 5341476 + | transcriptional regulator protein-like protein TERM 5282 5343313 - 5343329 + G 73 -2.1 -5.0538 | opp_overlap 5343313 AAGTGTCGATCAATA CCACCTG AGT CAGCCGG TTTTTTCAGGTAAGG TERM 5283 5343445 - 5343458 + G 73 -4.5 -4.78572 | TACCCGACAACCCCT TGGCG ACCT TGCCA TTTTATTGCTTGAGC TERM 5284 5343488 - 5343505 + G 80 -6.3 -4.66609 | CCTCAATCGCCAGAC TCCCTAT TGCA ATGGGGA TTTTTCAATCCAATA Ssed_4365 5341886 - 5343733 + | carboxypeptidase Ssed_4366 5344167 - 5345633 + | hypothetical protein Ssed_4367 5345774 - 5346256 + | putative cytochrome c-type protein TERM 5285 5346378 - 5346398 + T 89 -6.8 -5.31519 | opp_overlap 5346378 AAAATCTCCATCACA GGCCGC ACTCTCCAC GCGGCC TTTTTATTTACCTGT Ssed_4368 5347221 - 5346427 - | methyltransferase type 12 TERM 5286 5348005 - 5347980 - g 83 -8.3 -4.60487 | gap 1, overlap 5347982 TATCACCCTCAAAAA CGTCGATGGTGG GAT CCACC-TCGAAG ATGGCTCAGGTTCCA Ssed_4369 5347468 - 5348223 + | putative lipoprotein TERM 5287 5348663 - 5348674 + T 76 -4.4 -5.1615 | opp_overlap 5348654 5348663, overlap 5348654 AAAGAAGTGTGAAGA CACT ATTC AGTG TTTTTTAGGTATTAA Ssed_4370 5349374 - 5349120 - | excinuclease ABC subunit C Ssed_4371 5351560 - 5349371 - | oligopeptidase B TERM 5288 5351905 - 5351876 - H 75 -10.1 -3.11732 | opp_overlap 5351872 5351879, overlap 5351867 5351879 CCCAAACCGACTTAA CTATCCTCGAAGA ACTA TCTTCGAAGATTG TCAGTTTGGGGTCAG TERM 5289 5351902 - 5351879 - H 73 -10.4 -2.76456 | opp_overlap 5351879 5351872, overlap 5351876 5351867 AAACCGACTTAACTA TCCTCGAAGA ACTA TCTTCGAAGA TTGTCAGTTTGGGGT Ssed_4372 5352238 - 5352891 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 5290 5352956 - 5352913 - f 100 -17 -3.14126 | opp_overlap 5352922 5352928 5352947, overlap 5352905 5352922 5352928 TCAGAAACTGTAATA GTCACTAAACAAAAAGCAGA ACCC CCTGCTTTTTGTTTAGCGTC AATAACCATATGAAA TERM 5291 5352922 - 5352947 + F 82 -10.6 -3.61178 | opp_overlap 5352913 5352905 5352922 5352928, overlap 5352928 GTAATAGTCACTAAA CAAAAAGCAG AACCCC CTGCTTTTTG TTTAGCGTCAATAAC TERM 5292 5352947 - 5352922 - f 90 -11.3 -3.7948 | opp_overlap 5352922 5352928, overlap 5352913 5352905 5352928 GTAATAGTCACTAAA CAAAAAGCAGA ACCC CCTGCTTTTTG TTTAGCGTCAATAAC TERM 5293 5352928 - 5352941 + F 78 -3.8 -5.28942 | opp_overlap 5352922 5352913 5352905 5352928, overlap 5352922 GTCACTAAACAAAAA GCAG AACCCC CTGC TTTTTGTTTAGCGTC TERM 5294 5352941 - 5352928 - f 80 -4.5 -5.33405 | opp_overlap 5352928 5352922, overlap 5352922 5352913 5352905 GTCACTAAACAAAAA GCAGA ACCC CCTGC TTTTTGTTTAGCGTC TERM 5295 5353430 - 5353417 - g 70 -2.3 -4.98255 | overlap 5353420 TTCGAACTACAAAAA GAGCG CGGT CTCTC CGCAGGCTATATAGG TERM 5296 5353625 - 5353613 - g 83 -4.1 -5.38326 | overlap 5353614 TGAATCAAATAAAAA CCATG AGT CATGA GATTATCTTAGTCCG Ssed_4373 5353222 - 5356452 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 5297 5356482 - 5356500 + T 91 -13.2 -3.20382 | opp_overlap 5356482 TTAAGGGATCAAAAA GGAGCAGA AAA TCTGCTCC TTAGTCACTATGCGA TERM 5298 5356500 - 5356482 - T 100 -13.2 -4.77157 | opp_overlap 5356482 TTAAGGGATCAAAAA GGAGCAGA AAA TCTGCTCC TTAGTCACTATGCGA Ssed_4374 5357103 - 5356576 - | ferroxidase TERM 5299 5357069 - 5357053 - G 73 -2.3 -5.0916 | GTTTGAAGAGAAAAA CTCAA CATTAAT TTGAG CGTTTAATTGATCAA TERM 5300 5357702 - 5357673 - g 73 -10.1 -3.21806 | gap 1, overlap 5357668 5357675 GGAAGCAATATGCAA GA-GGCGATGATCA ATG TGATCAACGCCCTC AATCAAACCCCGCCT TERM 5301 5357699 - 5357675 - g 84 -12.9 -3.16618 | overlap 5357673 5357668 AAGCAATATGCAAGA GGCGATGATCA ATG TGATCAACGCC CTCAATCAAACCCCG Ssed_4375 5357367 - 5360483 + | acriflavin resistance protein TERM 5302 5360595 - 5360581 - g 77 -4.9 -4.87786 | CGAAGGTGATAAAAA GGAGG AAACG CCCCC CAGCTTAGTCAGTGT Ssed_4376 5360483 - 5361595 + | RND family efflux transporter MFP subunit TERM 5303 5361767 - 5361757 - f 70 -8.2 -3.75629 | opp_overlap 5361757 GATGTTTAAGGCAAA GGGC TTT GCCC TATTACGCTGCGTTG TERM 5304 5361796 - 5361819 + F 73 -9.6 -3.25823 | opp_overlap 5361798 TGAATGCTTTTGATA TACGACGGCA TGGA TGCAGTCGTA TTCCTCTCAAAAAAC Ssed_4377 5361967 - 5363211 + | molybdenum cofactor synthesis domain-containing protein Ssed_4378 5363294 - 5364079 + | molybdopterin biosynthesis protein MoeB TERM 5305 5364148 - 5364116 - T 71 -9.4 -2.89921 | gap 1 ACCAATCTTGAGACA GT-GCGATTAGATAA GCCA CTATCTAATCGCCAC TCAATCTCAACGGCT Ssed_4379 5364476 - 5364171 - | putative lipoprotein TERM 5306 5364917 - 5364929 + G 71 -9.1 -3.53563 | opp_overlap 5364917 GGTTCTCGCGCCAAA CTGGC ACA GCCAG TTTCAGAGCGAATAT TERM 5307 5364929 - 5364917 - g 71 -9.1 -3.53012 | opp_overlap 5364917 GGTTCTCGCGCCAAA CTGGC ACA GCCAG TTTCAGAGCGAATAT Ssed_4380 5364684 - 5365682 + | aminoglycoside phosphotransferase Ssed_4381 5366391 - 5365717 - | hypothetical protein TERM 5308 5366030 - 5366048 + g 77 -10.4 -3.54459 | TACTCACGTATTGGC TCGATTCT CTG AGAATCGA TTTCGAGGGGCTTCA Ssed_4382 5366873 - 5366388 - | sigma-24 (FecI-like) Ssed_4383 5367653 - 5366874 - | hypothetical protein TERM 5309 5366961 - 5366950 - G 72 -5.8 -4.34402 | TCCGTCATATCAAAA GACG CCTC CGTC ATCACTCCTAAGGTC Ssed_4384 5368546 - 5367644 - | hypothetical protein TERM 5310 5367709 - 5367719 + g 71 -6.8 -4.25104 | overlap 5367711 CGGTTCGACTACCAT TCGG GTG CCGA TTTTCATCGGCGGCC TERM 5311 5367740 - 5367755 + g 70 -7.6 -3.90112 | opp_overlap 5367742 ATCGGCGGCCTGTAA TATCGC CGCT GCGATA TTTCGTTCGGCGAGC Ssed_4385 5368830 - 5368546 - | hypothetical protein TERM 5312 5368997 - 5369025 + r 74 -9 -3.53811 | opp_overlap 5369002, overlap 5369002 TTGAGAACAGATACA AAAAAGCACTTC AAAAA GAAGTGCTTTTA TTTGGGAGAGCTCGC TERM 5313 5369020 - 5369002 - R 95 -8.9 -5.46276 | opp_overlap 5368997 5369002 AACAGATACAAAAAA GCACTTC AAAAA GAAGTGC TTTTATTTGGGAGAG TERM 5314 5369002 - 5369020 + r 90 -8.9 -4.86731 | opp_overlap 5369002, overlap 5368997 AACAGATACAAAAAA GCACTTC AAAAA GAAGTGC TTTTATTTGGGAGAG Ssed_4386 5370284 - 5369061 - | sodium/glutamate symporter TERM 5315 5369252 - 5369226 - G 76 -9.4 -3.83026 | TGCCCCCATACCAAA GCCGCAATGACC ACC AGCCATCACGGC GGCATCATAGTTACT Ssed_4387 5370779 - 5370621 - | hypothetical protein TERM 5316 5371245 - 5371232 - g 73 -8.1 -4.01158 | opp_overlap 5371230 5371232 AATGTGAGCAAACAA GCCTC CACT GAGGC TATTTATCTATTTGG Ssed_4388 5370926 - 5371705 + | amino acid ABC transporter TERM 5317 5371754 - 5371737 - T 93 -11.3 -4.1891 | opp_overlap 5371737 GCCTCTCAATAGAAA TGCAGCC ATTT GGCTGCA TTTTATCTGTCAAAC TERM 5318 5371737 - 5371754 + T 93 -11.3 -4.60797 | opp_overlap 5371737 GCCTCTCAATAGAAA TGCAGCC ATTT GGCTGCA TTTTATCTGTCAAAC Ssed_4389 5371951 - 5371787 - | hypothetical protein Ssed_4390 5372649 - 5371975 - | pseudouridine synthase Rlu family protein TERM 5319 5372297 - 5372284 - G 83 -2.3 -5.65177 | AGATTGAGAAAAAAA CTGTG TCAT CGCAG GGTTCTCCATCGTAC Ssed_4391 5373918 - 5372695 - | integral membrane sensor signal transduction histidine kinase Ssed_4392 5374678 - 5374001 - | two component transcriptional regulator Ssed_4393 5375224 - 5374688 - | hypothetical protein Ssed_4394 5375739 - 5375380 - | hypothetical protein TERM 5320 5375625 - 5375639 + g 71 -4.2 -4.67755 | overlap 5375624 5375636 CATCTTTCGCTTTAC CGGC TTCGGCC GCCG TTTTTGCATGGCTAT Ssed_4395 5376982 - 5375873 - | ABC transporter-related protein Ssed_4396 5377643 - 5376963 - | molybdate ABC transporter, inner membrane subunit Ssed_4397 5378462 - 5377647 - | molybdenum ABC transporter, periplasmic molybdate-binding protein Ssed_4398 5378976 - 5378512 - | molybdopterin biosynthesis protein MoaE Ssed_4399 5379230 - 5378979 - | molybdopterin converting factor, subunit 1 TERM 5321 5379020 - 5379006 - G 77 -4.2 -5.04987 | AACAGGCGGAAAAAA GGCAAC TTC ATCGCC ATCTTGTACCGGCGT Ssed_4400 5379716 - 5379240 - | molybdenum cofactor biosynthesis protein C TERM 5322 5379788 - 5379761 - R 95 -15 -2.86568 | overlap 5379757 5379758 CAAATAGAAAACTCA CCCGGTATCACT ACTT AGTAATACCGGG ACTACGACTTAACCC Ssed_4401 5380321 - 5379797 - | molybdenum cofactor biosynthesis protein B Ssed_4402 5381485 - 5380505 - | molybdenum cofactor biosynthesis protein A TERM 5323 5381598 - 5381588 - H 70 -3.2 -4.9218 | GACGTAGGACAAAAA GCTC GGA GAAC CGTCAGGGCTGATTA TERM 5324 5381807 - 5381795 - H 76 -9.1 -3.745 | overlap 5381793 GGACTGATTAAAACA CCCGT TTA ACGGG GAGAAGTGACCGACT Ssed_4403 5381835 - 5383484 + | electron-transferring-flavoprotein dehydrogenase TERM 5325 5383530 - 5383501 - f 100 -15.1 -4.26393 | opp_overlap 5383506, overlap 5383506 TAGATAAGAGACAAA TAAAAGCGCGCAC ATTA GTGCGCGCTTTTC TACTACGCCCCCAAA TERM 5326 5383506 - 5383525 + F 100 -15 -4.46212 | opp_overlap 5383501 5383506 AAGAGACAAATAAAA GCGCGCAC ATTA GTGCGCGC TTTTCTACTACGCCC TERM 5327 5383525 - 5383506 - f 100 -15 -5.08878 | opp_overlap 5383506, overlap 5383501 AAGAGACAAATAAAA GCGCGCAC ATTA GTGCGCGC TTTTCTACTACGCCC TERM 5328 5383691 - 5383702 + F 86 -4.4 -5.4505 | TTCGATAATACTGTT TAGG ATTA CCTA TTTTTTATTACCAGA TERM 5329 5384446 - 5384434 - g 78 -9.1 -4.13282 | AGGATACGTCTAAAA TCGGC AAT GCCGA TCTCAATAGCTTCTA TERM 5330 5385596 - 5385567 - g 78 -12.3 -2.62175 | opp_overlap 5385550, overlap 5385566 GTTGAAGATATCAAC CGTAATGTCACCG AGAT CAGTGACATTACA CAAAGAACTGCTGAC Ssed_4404 5383782 - 5385698 + | methyl-accepting chemotaxis sensory transducer Ssed_4405 5386199 - 5385831 - | hypothetical protein Ssed_4406 5386934 - 5386236 - | MOSC domain-containing protein Ssed_4407 5387103 - 5387555 + | hypothetical protein TERM 5331 5387762 - 5387790 + G 82 -12.5 -3.14344 | opp_overlap 5387765 GGTCACTTGCGTCAA TGATGGTGCCGAT GCC GTCGCCACCATCA TTGATAAACAGCCTG TERM 5332 5388051 - 5388071 + G 74 -11.2 -2.92463 | opp_overlap 5388051, overlap 5388053 AAGCCAATATCTAAA GAGCTCAC ATTTG GTGAGCTC TATCTGGATAATCAG TERM 5333 5388071 - 5388051 - g 81 -11.2 -3.77489 | opp_overlap 5388051 5388053 AAGCCAATATCTAAA GAGCTCAC ATTTG GTGAGCTC TATCTGGATAATCAG Ssed_4408 5387628 - 5388356 + | two component transcriptional regulator Ssed_4409 5388391 - 5389674 + | integral membrane sensor signal transduction histidine kinase TERM 5334 5389910 - 5389887 - g 73 -9.6 -3.4072 | TATTTCTCACCACAA TGCTAATCGC CGCA GCGCTTAGCA ACAAGGAAGCACAAG Ssed_4410 5389862 - 5390374 + | hypothetical protein Ssed_4411 5391860 - 5390403 - | diguanylate cyclase TERM 5335 5392013 - 5391991 - R 100 -9.1 -5.63504 | AATCGGATAAAAAAA TGCCCCGTT TGAGG AGCGGGGCA AATAGATGAAAAACA Ssed_4412 5393019 - 5392180 - | site-specific DNA-methyltransferase (adenine-specific) Ssed_4413 5393668 - 5393111 - | GCN5-related N-acetyltransferase TERM 5336 5393206 - 5393191 - G 71 -4.8 -4.63932 | CACCTTTGAAGAAAA CATTTT CAAT AAAATG TGCCTCTCGACGAAG TERM 5337 5394235 - 5394255 + r 79 -9.8 -3.71873 | opp_overlap 5394235 TAAGATAACAAAAAA GGTTGAAG CAAAA CTTCAACC TTTCGATGTGGATCG TERM 5338 5394255 - 5394235 - R 100 -10.5 -5.64304 | opp_overlap 5394235 TAAGATAACAAAAAA GGTTGAAGC AAA ACTTCAACC TTTCGATGTGGATCG Ssed_4414 5395686 - 5394349 - | coproporphyrinogen III oxidase TERM 5339 5395788 - 5395778 - R 86 -2.4 -5.95539 | CGGTAAATAAAAAAA CCAC TTT GAGG TATAAAAGTATCATT TERM 5340 5396032 - 5396057 + r 79 -8.9 -3.81741 | opp_overlap 5396032 ACCATAAAACAAAAA CACCCCGCTGG TTAC CCAACGAGGTG TTTCACTTATAGCTT TERM 5341 5396057 - 5396032 - R 100 -13.3 -5.56263 | opp_overlap 5396032 ACCATAAAACAAAAA CACCCCGCTGG TTAC CCAACGAGGTG TTTCACTTATAGCTT Ssed_4415 5397084 - 5396098 - | formate dehydrogenase, C subunit, putative TERM 5342 5396433 - 5396423 - G 77 -8.2 -4.25104 | opp_overlap 5396422 5396426 CCTGCGTTAGCAAAA CCGG CAT CCGG ATGCTTACCTTTGAA TERM 5343 5397100 - 5397125 + r 91 -11.9 -4.09685 | ATTACATCCTTATCT TCCACACCATG TCAC CATGGCGTGGA TTTTACGCGATAAAA Ssed_4416 5397859 - 5397290 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_4417 5400743 - 5397888 - | molybdopterin oxidoreductase Ssed_4418 5400959 - 5400762 - | hypothetical protein TERM 5344 5401511 - 5401537 + r 81 -7.4 -4.57474 | gap 1, opp_overlap 5401511 ACCAGATACAAAAAA GCCTCAG-TGA AAGATA TCAGCTGAGGC TTTTATCTGAGTTCC TERM 5345 5401537 - 5401511 - R 93 -7.4 -5.43414 | gap 1, opp_overlap 5401511 ACCAGATACAAAAAA GCCTCAG-TGA AAGATA TCAGCTGAGGC TTTTATCTGAGTTCC Ssed_4419 5402588 - 5401581 - | formate dehydrogenase, gamma subunit TERM 5346 5402642 - 5402614 - R 100 -14.7 -3.21747 | opp_overlap 5402614 5402616, overlap 5402616 TTATCGGACTAGTAA CAGGGCCATGAAC AGA GTTCATAGCCCTA TTTGTCCTACGCGCC TERM 5347 5402614 - 5402642 + r 84 -10.3 -3.96148 | opp_overlap 5402614 5402616, overlap 5402616 TTATCGGACTAGTAA CAGGGCCATGAAC AGA GTTCATAGCCCTA TTTGTCCTACGCGCC TERM 5348 5402616 - 5402640 + r 95 -12.9 -3.57406 | opp_overlap 5402614 5402616, overlap 5402614 ATCGGACTAGTAACA GGGCCATGAAC AGA GTTCATAGCCC TATTTGTCCTACGCG TERM 5349 5402640 - 5402616 - R 100 -15.1 -3.17229 | opp_overlap 5402616 5402614, overlap 5402614 ATCGGACTAGTAACA GGGCCATGAAC AGA GTTCATAGCCC TATTTGTCCTACGCG Ssed_4420 5403239 - 5402649 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5350 5403040 - 5403022 - G 88 -11.8 -3.86346 | TCAGTCTTGTAGAAA CAGTTTGC TGG GCAAACTG CCTGACAAGGTGCAT Ssed_4421 5406116 - 5403267 - | molybdopterin oxidoreductase Ssed_4422 5406353 - 5406153 - | twin-arginine translocation pathway signal TERM 5351 5406423 - 5406440 + r 80 -7.7 -4.4009 | overlap 5406425 ATGACCCGGTTACTT TTGAGGG CGAA CCCTCGA TTTTATAACATCAAC Ssed_4423 5407232 - 5406537 - | cytoplasmic chaperone TorD family protein Ssed_4424 5408934 - 5407243 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5352 5408797 - 5408777 - G 71 -8.9 -3.53012 | opp_overlap 5408778, overlap 5408778 TTGTCCGCCGCTAAA CGGGCCAGA TCT TCCGGCCCT ATGATTAGTACATTC TERM 5353 5408796 - 5408778 - G 78 -12.4 -2.71712 | opp_overlap 5408778, overlap 5408777 TGTCCGCCGCTAAAC GGGCCAGA TCT TCCGGCCC TATGATTAGTACATT TERM 5354 5408778 - 5408796 + g 72 -10.2 -2.94466 | opp_overlap 5408778 5408777 TGTCCGCCGCTAAAC GGGCCAGA TCT TCCGGCCC TATGATTAGTACATT Ssed_4425 5409786 - 5409163 - | hypothetical protein Ssed_4426 5410256 - 5409786 - | hypothetical protein TERM 5355 5411308 - 5411285 - g 77 -4.6 -4.8543 | gap 1, overlap 5411287 GAACTCGCACAAAAA CTTGGCA-TCA CCA TGATTGCCAGG GCAAAAGGCAAGCAC Ssed_4427 5410511 - 5411398 + | formate dehydrogenase, subunit FdhD Ssed_4428 5411486 - 5412391 + | DNA binding domain-containing protein TERM 5356 5413596 - 5413576 - T 72 -8.3 -3.60475 | AATAAACCGTTCAAA GGCTAAGAA CGA TACTTAGCC CAGAGCGCCTGCTGC Ssed_4429 5414792 - 5413578 - | putative SAM-dependent methyltransferase Ssed_4430 5415265 - 5414852 - | flagellar basal body-associated protein FliL-like protein TERM 5357 5415704 - 5415688 - g 93 -2.2 -6.17268 | GGATAAGAAAAAAAA CGAGCT GTTAA ACCTCG GTACTCGCCCACTGG Ssed_4431 5415374 - 5415937 + | chorismate lyase Ssed_4432 5418868 - 5416013 - | peptidase M6, immune inhibitor A TERM 5358 5417792 - 5417813 + g 73 -10.1 -3.25719 | opp_overlap 5417790 5417794 CACCGACCAGGAACC CACGGGGGA GCCG TCACCCGTG TTAGTGGTGTCATAC TERM 5359 5417983 - 5417973 - G 79 -3.2 -5.21709 | overlap 5417975 GTGTAGACGAAAAAA CGGT GAG ACCA GATAGCATCGGTCCC Ssed_4433 5419206 - 5418883 - | hypothetical protein Ssed_4434 5421546 - 5419390 - | glycoside hydrolase family protein Ssed_4435 5422568 - 5421963 - | multiple antibiotic resistance (MarC)-related protein Ssed_4436 5422807 - 5424336 + | hypothetical protein TERM 5360 5425282 - 5425253 - g 83 -12.9 -2.95388 | opp_overlap 5425252 5425251 5425249, overlap 5425245 CATCGAAGTCAGATA TGACGGCAAAGGC AGAA ACCTTGGCCGTCA GGTGTTTACGGTTGA Ssed_4437 5424546 - 5425307 + | hypothetical protein Ssed_4438 5425851 - 5425288 - | hypothetical protein Ssed_4439 5426397 - 5425975 - | hypothetical protein TERM 5361 5426777 - 5426827 + H 82 -8.4 -4.21922 | opp_overlap 5426804, overlap 5426778 5426791 AATAACTCTGAGTTG ACCACTTTCTTATACCGATTGGTA TAA TACCAATCGGTATAATGAGGCCGA TTTCATTTTAAATGG TERM 5362 5426778 - 5426826 + H 83 -11.9 -3.1243 | opp_overlap 5426804, overlap 5426777 5426791 ATAACTCTGAGTTGA CCACTTTCTTATACCGATTGGTA TAA TACCAATCGGTATAATGAGGCCG ATTTCATTTTAAATG TERM 5363 5426791 - 5426813 + H 95 -15 -2.78463 | opp_overlap 5426804, overlap 5426778 5426777 GACCACTTTCTTATA CCGATTGGTA TAA TACCAATCGG TATAATGAGGCCGAT Ssed_4440 5426839 - 5427408 + | phospholipid/glycerol acyltransferase Ssed_4441 5427494 - 5428120 + | lysine exporter protein (LysE/YggA) Ssed_4442 5429566 - 5428304 - | MscS mechanosensitive ion channel Ssed_4443 5429763 - 5430299 + | hypothetical protein Ssed_4444 5430392 - 5431018 + | hypothetical protein TERM 5364 5431028 - 5431053 + T 71 -7.6 -3.83026 | ATGTAGTCTATCTGT CAGGCTCAGT CTATTT ACTCAGCCTG TTTACTATGAGAAAG TERM 5365 5431097 - 5431068 - T 73 -7.1 -3.99324 | opp_overlap 5431068 5431068, overlap 5431069 GTTTACTATGAGAAA GCGACCCTGAATA TTCA CATTCGGGGTCGG CTTTAATTAGCTCGC TERM 5366 5431068 - 5431098 + T 77 -8.4 -3.93288 | gap 1, opp_overlap 5431068 5431069, overlap 5431068 GTTTACTATGAGAAA G-CGACCCTGAAT ATTCAC ATTCGGGGTCGGC TTTAATTAGCTCGCC TERM 5367 5431096 - 5431069 - T 78 -10.6 -2.99273 | opp_overlap 5431068 5431068, overlap 5431068 TTTACTATGAGAAAG CGACCCTGAATA TTCA CATTCGGGGTCG GCTTTAATTAGCTCG Ssed_4445 5431647 - 5431147 - | thioesterase superfamily protein TERM 5368 5431777 - 5431790 + r 89 -9.5 -4.2558 | opp_overlap 5431777 GCAGACAACAAAAAA GGGCC CTAA GGCCC TTTTAATACGACATG TERM 5369 5431790 - 5431777 - R 100 -9.5 -5.60689 | opp_overlap 5431777 GCAGACAACAAAAAA GGGCC CTAA GGCCC TTTTAATACGACATG Ssed_4446 5433398 - 5431866 - | histidine ammonia-lyase Ssed_4447 5435072 - 5433402 - | urocanate hydratase Ssed_4448 5435948 - 5435247 - | histidine utilization repressor TERM 5370 5436085 - 5436097 + H 70 -3.4 -4.86731 | opp_overlap 5436056 5436080 5436075, overlap 5436080 TACAAGTAAATACAA GTTG GATCA CAAC TTTTATTTCCGAACG Ssed_4449 5436144 - 5437370 + | imidazolonepropionase TERM 5371 5437379 - 5437409 + T 79 -10.5 -3.59402 | overlap 5437375 5437385 CCAGTAATTTGGTAG CCTGAGCGATGAG GCTGA CTCATCGTTTGGG TTGGTTTCATCTGGC TERM 5372 5437385 - 5437403 + T 79 -8.9 -3.83214 | overlap 5437379 5437375 ATTTGGTAGCCTGAG CGATGAG GCTGA CTCATCG TTTGGGTTGGTTTCA Ssed_4450 5438384 - 5437632 - | hypothetical protein TERM 5373 5438409 - 5438396 - R 74 -5.3 -4.67048 | opp_overlap 5438396 CCACTGCAAAAGAAA GAACT ATAG AGTTC TCATTCTTATTCCGA TERM 5374 5438523 - 5438509 - R 73 -7.2 -4.02021 | AACGAATCAACTAAA CATGAT TTC ATCATG CATACCCCAATTCCC Ssed_4451 5439538 - 5438990 - | outer membrane protein, putative TERM 5375 5439975 - 5439959 - R 73 -9.5 -3.23853 | overlap 5439957 TCTTTGCAATTAAGA GTGGAAT GGA ATTCCAC GACGTTCATCAAGCG Ssed_4452 5441208 - 5440024 - | hypothetical protein TERM 5376 5441380 - 5441346 - R 100 -18.8 -4.08216 | opp_overlap 5441346 5441351 TGATGTGCCTGAAAA TATAAGAGGCTGACAC AAG GTGACAGCCTCTTATA TTATTGACAAATAAC TERM 5377 5441346 - 5441380 + r 100 -18.8 -3.62597 | opp_overlap 5441346, overlap 5441351 TGATGTGCCTGAAAA TATAAGAGGCTGACAC AAG GTGACAGCCTCTTATA TTATTGACAAATAAC TERM 5378 5441351 - 5441375 + r 100 -14.3 -3.83318 | opp_overlap 5441346, overlap 5441346 TGCCTGAAAATATAA GAGGCTGACAC AAG GTGACAGCCTC TTATATTATTGACAA Ssed_4453 5442244 - 5441444 - | Sel1 domain-containing protein TERM 5379 5443016 - 5443046 + G 83 -9 -4.45117 | opp_overlap 5443016 5443019, overlap 5443019 CTGCAACATCATTAA CACCATCAGCTTAG CCC CTAAGCAGGTGCTG TTTATTTCGGATGTG Ssed_4454 5442504 - 5443181 + | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase TERM 5380 5443209 - 5443228 + T 100 -12.2 -5.4251 | opp_overlap 5443209 TTGAATAGCGCTAAA GGCACTCT TCGA AGAGTGCC TTTTTTGTGTCTGGA TERM 5381 5443228 - 5443209 - T 89 -12.2 -3.6106 | opp_overlap 5443209 TTGAATAGCGCTAAA GGCACTCT TCGA AGAGTGCC TTTTTTGTGTCTGGA Ssed_4455 5444116 - 5443346 - | hypothetical protein TERM 5382 5444321 - 5444339 + G 85 -3.1 -5.52986 | TTTACTTCCGCTATT TCGAAAC CGCCC GTATCGA TTTTTTTACTCAGAT Ssed_4456 5444215 - 5444649 + | thioesterase superfamily protein Ssed_4457 5444674 - 5444931 + | hypothetical protein Ssed_4458 5445416 - 5445012 - | thioesterase superfamily protein TERM 5383 5445803 - 5445819 + r 87 -12.3 -3.35912 | opp_overlap 5445803 TCCATGTATAAAAAA GGGATGC TAA GCATCCC TTCATCTCTATCGTA TERM 5384 5445819 - 5445803 - R 100 -12.3 -5.28176 | opp_overlap 5445803 TCCATGTATAAAAAA GGGATGC TAA GCATCCC TTCATCTCTATCGTA Ssed_4459 5447658 - 5445862 - | AMP-dependent synthetase and ligase TERM 5385 5446601 - 5446574 - G 82 -5.6 -5.02476 | gap 1 ATACTCTGGAAAAAA GCACTGACGTTAG GGT CTAAAG-CAGCGC CACCACATGGCATAA TERM 5386 5447741 - 5447730 - H 73 -5.8 -4.62085 | ATTCGCAAAAAATAA GAGC AATT GCTC AAACTTTGTTAAATT Ssed_4460 5448143 - 5449744 + | TAP domain-containing protein Ssed_4461 5449737 - 5450471 + | ABC transporter-related protein Ssed_4462 5450548 - 5451696 + | ABC-2 type transporter Ssed_4463 5453614 - 5451956 - | methyl-accepting chemotaxis sensory transducer TERM 5387 5453883 - 5453865 - R 100 -6 -5.86609 | opp_overlap 5453865 CTAAAAAAAGAAAAA GCCCAAAC AGT ATTTGAGC TTTATTATGACGCCT Ssed_4464 5454452 - 5453919 - | molybdenum cofactor biosynthesis protein Ssed_4465 5455075 - 5454623 - | NLP/P60 protein Ssed_4466 5456265 - 5455081 - | hypothetical protein TERM 5388 5455642 - 5455659 + g 77 -4.1 -5.12068 | AACGGCGATACCGGA CAGGGGT TCGA ACTTCTG TTTTTGTTCACTATG TERM 5389 5456312 - 5456330 + r 72 -8.8 -3.60525 | opp_overlap 5456312 AACAGCCATAAAAAA GGGCGCTA TTT TAGCACCC TTATCTGTACATGGA TERM 5390 5456330 - 5456312 - R 100 -11 -5.30686 | opp_overlap 5456312 AACAGCCATAAAAAA GGGCGCTA TTT TAGCACCC TTATCTGTACATGGA Ssed_4467 5457412 - 5456396 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 5391 5457041 - 5457069 + g 88 -12.4 -3.66178 | opp_overlap 5457040 5457039 CTCACCTAGAATATC CCGGGCGACTTC CTGGA GAAGACGTCCGG TTTCGGGTTCAAGCC TERM 5392 5457381 - 5457358 - G 83 -11.6 -3.52522 | overlap 5457352 CTAGAGAAATAGCAA GGGCGGTGCC ATAA GACCCCGCCC CCAGTACCGTAATGT Ssed_4468 5458021 - 5457533 - | preprotein translocase subunit SecB Ssed_4469 5458684 - 5458250 - | rhodanese domain-containing protein Ssed_4470 5458925 - 5460469 + | phosphoglyceromutase TERM 5393 5460480 - 5460491 + G 79 -2.2 -5.4505 | AGTAACTCTTAACTA GTGA ATAT TCGC TTTTTTATTAAAGCC TERM 5394 5460504 - 5460521 + G 87 -11.3 -4.04209 | opp_overlap 5460504 CGCTTTTTTATTAAA GCCAGCA TTAT TGCTGGC TTTATCATACTTTCA TERM 5395 5460521 - 5460504 - g 81 -11.3 -3.72576 | opp_overlap 5460504 CGCTTTTTTATTAAA GCCAGCA TTAT TGCTGGC TTTATCATACTTTCA Ssed_4471 5460480 - 5461613 + | peptidase M23B Ssed_4472 5461647 - 5462852 + | C-terminal processing peptidase Ssed_4473 5462886 - 5463647 + | protein of unknown function DUF610, YibQ TERM 5396 5463632 - 5463654 + T 82 -11.4 -3.24076 | overlap 5463629 GGGAGGAGACTCTGC TATACGGCTG AAG TAGCCGTATA TATCTTATCTAATAA TERM 5397 5463700 - 5463674 - T 89 -10.2 -4.22554 | TTATCTAATAAAGAA TGCCAAACGAGA AGA TTTCGTCTGGCA CATGATAAAATCTCA Ssed_4474 5464173 - 5463718 - | BadM/Rrf2 family transcriptional regulator Ssed_4475 5464447 - 5464196 - | hypothetical protein TERM 5398 5464492 - 5464452 - R 87 -8.5 -4.49337 | overlap 5464453 CGACAATCCATAAAA CCACTCCTATAAAAGAACA TTA TACTCTTTTATAGGTATGA AACTAGAAGCAAAAC TERM 5399 5464491 - 5464453 - R 75 -9.8 -3.28879 | overlap 5464452 GACAATCCATAAAAC CACTCCTATAAAAGAACA TTA TACTCTTTTATAGGTATG AAACTAGAAGCAAAA TERM 5400 5464694 - 5464715 + r 95 -13.1 -3.47307 | opp_overlap 5464694 TTCAAATACGAAAAA GCCCTAACA TTGC TGTTAGGGC TTATCGTAATGTTGG TERM 5401 5464715 - 5464694 - R 100 -13.1 -4.93696 | opp_overlap 5464694 TTCAAATACGAAAAA GCCCTAACA TTGC TGTTAGGGC TTATCGTAATGTTGG TERM 5402 5464882 - 5464917 + r 95 -12 -4.1891 | opp_overlap 5464882 5464889, overlap 5464889 TAGCTAAGGCTAAAC GAAAAAAGCCTCTACA TTTC TGTAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5403 5464917 - 5464882 - R 93 -14.2 -2.79968 | opp_overlap 5464882 5464889, overlap 5464889 TAGCTAAGGCTAAAC GAAAAAAGCCTCTACA TTTC TGTAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5404 5464910 - 5464889 - R 100 -13.1 -5.37593 | opp_overlap 5464882 5464889, overlap 5464882 GGCTAAACGAAAAAA GCCTCTACA TTTC TGTAGAGGC TTTCGTCTTTGTGTT TERM 5405 5464889 - 5464910 + r 100 -13.1 -4.07089 | opp_overlap 5464889 5464882, overlap 5464882 GGCTAAACGAAAAAA GCCTCTACA TTTC TGTAGAGGC TTTCGTCTTTGTGTT TERM 5406 5465083 - 5465131 + r 93 -11.3 -4.1891 | gap 1, opp_overlap 5465083 5465090, overlap 5465090 TAGCTAAGGCTAAAC GAAAAAAGCCTCTGCA-TTCTT TTCAAT AAGAAGTGCAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5407 5465131 - 5465083 - R 91 -13.5 -2.79968 | gap 1, opp_overlap 5465083 5465090, overlap 5465090 TAGCTAAGGCTAAAC GAAAAAAGCCTCTGCA-TTCTT TTCAAT AAGAAGTGCAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5408 5465090 - 5465124 + r 93 -12.4 -4.07089 | gap 1, opp_overlap 5465083 5465090, overlap 5465083 GGCTAAACGAAAAAA GCCTCTGCA-TTCTT TTCAAT AAGAAGTGCAGAGGC TTTCGTCTTTGTGTT TERM 5409 5465124 - 5465090 - R 100 -12.4 -5.37593 | gap 1, opp_overlap 5465090 5465083, overlap 5465083 GGCTAAACGAAAAAA GCCTCTGCA-TTCTT TTCAAT AAGAAGTGCAGAGGC TTTCGTCTTTGTGTT TERM 5410 5465184 - 5465162 - R 85 -11.2 -3.40403 | CGGGCGGGACTAGAA CCCGTGTGCC TTC GGCACGCGAG ACAGGCCGCTTTCTA TERM 5411 5465297 - 5465332 + r 95 -12 -4.1891 | opp_overlap 5465297 5465304, overlap 5465304 TAGCTAAGGCTAAAC GAAAAAAGCCTCTACA TTTC TGTAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5412 5465332 - 5465297 - R 93 -14.2 -2.79968 | opp_overlap 5465297 5465304, overlap 5465304 TAGCTAAGGCTAAAC GAAAAAAGCCTCTACA TTTC TGTAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5413 5465304 - 5465325 + r 100 -13.1 -4.07089 | opp_overlap 5465297 5465304, overlap 5465297 GGCTAAACGAAAAAA GCCTCTACA TTTC TGTAGAGGC TTTCGTCTTTGTGTT TERM 5414 5465325 - 5465304 - R 100 -13.1 -5.37593 | opp_overlap 5465304 5465297, overlap 5465297 GGCTAAACGAAAAAA GCCTCTACA TTTC TGTAGAGGC TTTCGTCTTTGTGTT TERM 5415 5465498 - 5465533 + r 95 -12 -4.1891 | opp_overlap 5465498 5465505, overlap 5465505 TAGCTAAGGCTAAAC GAAAAAAGCCTCTACA TTTC TGTAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5416 5465533 - 5465498 - R 93 -14.2 -2.79968 | opp_overlap 5465498 5465505, overlap 5465505 TAGCTAAGGCTAAAC GAAAAAAGCCTCTACA TTTC TGTAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5417 5465526 - 5465505 - R 100 -13.1 -5.37593 | opp_overlap 5465505 5465498, overlap 5465498 GGCTAAACGAAAAAA GCCTCTACA TTTC TGTAGAGGC TTTCGTCTTTGTGTT TERM 5418 5465505 - 5465526 + r 100 -13.1 -4.07089 | opp_overlap 5465498 5465505, overlap 5465498 GGCTAAACGAAAAAA GCCTCTACA TTTC TGTAGAGGC TTTCGTCTTTGTGTT TERM 5419 5467090 - 5467101 + r 72 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 5420 5467597 - 5467613 + r 75 -8 -4.08546 | overlap 5467586 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 5421 5468395 - 5468407 + r 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5422 5470900 - 5470917 + r 72 -8.5 -3.61178 | GAGTAAATTTTTTGA CTACTTC GTGA GAAGTAG TTTCGAATAACTCAA TERM 5423 5472431 - 5472472 + r 93 -14 -3.02511 | gap 1, opp_overlap 5472441, overlap 5472441 TTCGCGGAGCGTATA TACGAAAAAAGCCCTAGCG TTTTC TGCTAGGGC-TTTTTCGTG TATTAGGCGCCTGGA TERM 5424 5472441 - 5472463 + r 95 -11.3 -4.87807 | opp_overlap 5472441, overlap 5472431 GTATATACGAAAAAA GCCCTAGCG TTTTC TGCTAGGGC TTTTTCGTGTATTAG TERM 5425 5472463 - 5472441 - R 100 -10.6 -5.24989 | opp_overlap 5472431 5472441 GTATATACGAAAAAA GCCCTAGC GTTTTCT GCTAGGGC TTTTTCGTGTATTAG TERM 5426 5473848 - 5473859 + r 72 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 5427 5474364 - 5474380 + r 75 -8 -4.08546 | overlap 5474353 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 5428 5475162 - 5475174 + r 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5429 5477683 - 5477699 + r 82 -10.9 -3.61178 | GAGTAAAATTTTTGA TTGCCTC AAA GAGGCAA TTTCGAATAACTCAA TERM 5430 5478196 - 5478212 + r 71 -5 -4.56629 | opp_overlap 5478197, overlap 5478197 CTTAAGATACCCAAA AGGGGC TAAAC GCCCCC TTTTATACTCTTATC TERM 5431 5478211 - 5478197 - R 82 -8.5 -4.28375 | opp_overlap 5478196 5478197 TTAAGATACCCAAAA GGGGC TAAAC GCCCC CTTTTATACTCTTAT TERM 5432 5478197 - 5478211 + r 70 -8.5 -3.32893 | opp_overlap 5478197, overlap 5478196 TTAAGATACCCAAAA GGGGC TAAAC GCCCC CTTTTATACTCTTAT Ssed_4476 5479687 - 5478248 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ssed_4477 5479778 - 5480131 + | hypothetical protein TERM 5433 5480278 - 5480302 + G 74 -9.4 -3.65084 | overlap 5480279 CAGGTTTCAGACATT TTTGATCCCA CACTA TGGGATCAAG TTTCCGGGTTTGATT TERM 5434 5480279 - 5480301 + G 74 -10.7 -2.78327 | overlap 5480278 AGGTTTCAGACATTT TTGATCCCA CACTA TGGGATCAA GTTTCCGGGTTTGAT Ssed_4478 5480254 - 5481159 + | naphthoate synthase Ssed_4479 5481377 - 5481583 + | hypothetical protein Ssed_4480 5481783 - 5482856 + | integrase, catalytic region TERM 5435 5482885 - 5482913 + T 71 -6.8 -4.07246 | gap 1 TAACTTAGCGATTAG GTCAACTAGGTCA TCGA TG-CCTGGTTGGC TTTAATTTCCCGTAG TERM 5436 5483068 - 5483040 - T 100 -13.9 -5.18643 | opp_overlap 5483040 GCAATTAAAATAAAA GCCCCTGTTAGAT TCT ATCCAGCAGGGGC TTTACTATTCTTGCT TERM 5437 5483040 - 5483068 + T 100 -13.9 -4.01737 | opp_overlap 5483040 GCAATTAAAATAAAA GCCCCTGTTAGAT TCT ATCCAGCAGGGGC TTTACTATTCTTGCT Ssed_4481 5484926 - 5483097 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 5438 5485029 - 5484999 - R 83 -12.7 -2.57092 | gap 1, opp_overlap 5484998 5484999 5485001, overlap 5484995 5485004 AATTTGATTAACTTA CATGAGGTGCCAGG ATCA CCTG-CACCCCATG GTTTGAAATTGTTTC TERM 5439 5484999 - 5485029 + r 73 -10.5 -2.8382 | gap 1, opp_overlap 5484999 5484995 5485004, overlap 5484998 5485001 AATTTGATTAACTTA CATGAGGTGCCAGG ATCA CCTG-CACCCCATG GTTTGAAATTGTTTC Ssed_4482 5485761 - 5484991 - | DeoR family transcriptional regulator TERM 5440 5485896 - 5485876 - R 100 -14.1 -5.81412 | opp_overlap 5485868 5485876 TTCAGGCAAAAAAAA GCCTCTATC CAA GATAGAGGC TTTCGCTATTCTCTT TERM 5441 5485876 - 5485896 + r 100 -14.1 -3.80745 | opp_overlap 5485876, overlap 5485868 TTCAGGCAAAAAAAA GCCTCTATC CAA GATAGAGGC TTTCGCTATTCTCTT Ssed_4483 5488090 - 5485952 - | TonB-dependent siderophore receptor TERM 5442 5486400 - 5486418 + g 80 -8.8 -4.371 | overlap 5486403 CCTTTATGACGCTGC TCTCCACC TTG GGTGGTGA TTTTAGTGTCATCAC TERM 5443 5488299 - 5488282 - R 100 -12.7 -5.80951 | opp_overlap 5488282 AGTTAAAACAAAAAA GCGACCC GTTC GGGTCGC TTCGATGTATGTATC TERM 5444 5488282 - 5488299 + r 85 -12.7 -3.18511 | opp_overlap 5488282 AGTTAAAACAAAAAA GCGACCC GTTC GGGTCGC TTCGATGTATGTATC Ssed_4484 5489687 - 5488320 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 5445 5489868 - 5489839 - R 100 -13.7 -4.58283 | opp_overlap 5489846, overlap 5489846 CAACTTCTTTAAAAA CAAAAAAGGCGCC ATTA GGCGCCTTTTTTC ATCAAACAATGACCT TERM 5446 5489861 - 5489846 - R 100 -11.8 -5.93252 | opp_overlap 5489846, overlap 5489839 TTTAAAAACAAAAAA GGCGCC ATTA GGCGCC TTTTTTCATCAAACA TERM 5447 5489846 - 5489861 + r 100 -11.8 -5.14563 | opp_overlap 5489846 5489839 TTTAAAAACAAAAAA GGCGCC ATTA GGCGCC TTTTTTCATCAAACA Ssed_4485 5490311 - 5489883 - | F0F1 ATP synthase subunit epsilon Ssed_4486 5491747 - 5490371 - | F0F1 ATP synthase subunit beta Ssed_4487 5492643 - 5491783 - | F0F1 ATP synthase subunit gamma TERM 5448 5492434 - 5492451 + g 70 -7.7 -3.96148 | CCGCTTGGCCTCTCT CACCTCT AAAT AGGGGTG TTTATACTCGAGAGA Ssed_4488 5494232 - 5492691 - | F0F1 ATP synthase subunit alpha TERM 5449 5493385 - 5493398 + g 73 -8.1 -4.08216 | opp_overlap 5493368 CCTGGGTATGCTTCA CGTCC TGGT GGACG TTTTAGCAACAATGA Ssed_4489 5494780 - 5494247 - | F0F1 ATP synthase subunit delta Ssed_4490 5495267 - 5494797 - | F0F1 ATP synthase subunit B Ssed_4491 5495556 - 5495305 - | F0F1 ATP synthase subunit C Ssed_4492 5496417 - 5495623 - | F0F1 ATP synthase subunit A Ssed_4493 5496813 - 5496421 - | ATP synthase I chain TERM 5450 5496743 - 5496729 - G 80 -4.2 -5.26119 | TGGCGAAAAAGAAAA CTGAAG CAC CCCCAG CCACCGCCGCCTGCA TERM 5451 5497020 - 5497035 + r 72 -3.2 -5.03145 | opp_overlap 5497021, overlap 5497021 ACAAAATTACATAAT ATGACG TTAA CGTCAG TTTTTTAGCGGATTC Ssed_4494 5497924 - 5497040 - | ParB family protein Ssed_4495 5498728 - 5497940 - | cobyrinic acid a,c-diamide synthase TERM 5452 5498073 - 5498041 - G 73 -10.5 -3.2059 | opp_overlap 5498052, overlap 5498039 ATTTATCATAATACA TTGCCGGAGCCCCAA AAC TTGGTGCTTCGGCTA ACCTGACATTTCTGG TERM 5453 5498437 - 5498486 + g 74 -9.3 -3.63336 | opp_overlap 5498437, overlap 5498440 CAAAGAACTCCATAA GTTTGATCTCAGCGGCGGTAACG TCAC CGTTACCGGCAATAAGATCATAC TTTCCGGTGGTATCT TERM 5454 5498486 - 5498437 - G 91 -13.7 -3.4082 | opp_overlap 5498437 5498440 CAAAGAACTCCATAA GTTTGATCTCAGCGGCGGTAACG TCAC CGTTACCGGCAATAAGATCATAC TTTCCGGTGGTATCT Ssed_4496 5499439 - 5498819 - | glucose-inhibited division protein B TERM 5455 5499260 - 5499234 - G 72 -5.8 -4.45083 | overlap 5499236 CCGACATCGATAAAA CGTTCACCCACA AGA TGTGGTGAAACG GCAAGGCTATCCATG Ssed_4497 5501460 - 5499562 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Ssed_4498 5502361 - 5501921 - | flavodoxin Ssed_4499 5503392 - 5502592 - | 3-demethylubiquinone-9 3-O-methyltransferase TERM 5456 5503328 - 5503344 + g 74 -2.9 -5.03713 | TTAGCGATCTCTCTT TCGGTGT CCA GCGCTGA TTTTCTTTCGTTGTT TERM 5457 5503553 - 5503581 + r 83 -12.6 -2.87963 | gap 1, opp_overlap 5503553 GTGTTTTAATAAAAA GCTGTCGA-GTCA CGAA TGACATCGACAGC TCTACTCATTATCAG TERM 5458 5503581 - 5503553 - R 100 -12.6 -5.06414 | gap 1, opp_overlap 5503553 GTGTTTTAATAAAAA GCTGTCGA-GTCA CGAA TGACATCGACAGC TCTACTCATTATCAG Ssed_4500 5505009 - 5503606 - | methyl-accepting chemotaxis protein Ssed_4501 5506300 - 5505656 - | lysine exporter protein (LysE/YggA) TERM 5459 5506573 - 5506563 - H 73 -6.8 -4.25104 | TTTGTTTTATGAAAA CCTG ACT CAGG CTAGCACCGGGTTAT Ssed_4502 5507251 - 5508180 + | hypothetical protein TERM 5460 5508266 - 5508285 + T 93 -10 -4.8622 | TATGGATGTTTGATT GGCTATGG GGAA CCATGGCC TTTTTGCTTGAACGA Ssed_4503 5511705 - 5508547 - | type III restriction enzyme, res subunit TERM 5461 5509076 - 5509098 + g 70 -2.1 -4.87626 | opp_overlap 5509078, overlap 5509078 TTATTATCAAGTAAG TAGTTAATA ACTTG TATTAACTC TTTTTGATATTCAGG TERM 5462 5511261 - 5511243 - G 77 -8.2 -4.21086 | TAATAAATGAAACAA TCCAACAG ATC CTATTGGA AGAGAATATTTCACG Ssed_4504 5511838 - 5512245 + | hypothetical protein Ssed_4505 5512482 - 5512216 - | hypothetical protein TERM 5463 5512381 - 5512371 - G 73 -8.2 -3.84246 | GTTTCAAGGATGAAA CCGC AAA GCGG CCAGGGATGGCTTCA TERM 5464 5512549 - 5512508 - R 74 -3.7 -5.04222 | opp_overlap 5512511 5512514, overlap 5512512 TAATGAAACCAAAAA GATATTTGCGTTACTTGCT AGCC AGCAAGTAACGGGTACTTC GTCCACCAGCTCCCG TERM 5465 5512514 - 5512543 + r 73 -10.1 -2.77899 | opp_overlap 5512512 5512508, overlap 5512511 AACCAAAAAGATATT TGCGTTACTTGCT AGCC AGCAAGTAACGGG TACTTCGTCCACCAG Ssed_4506 5513615 - 5512518 - | filamentation induced by cAMP protein Fic TERM 5466 5512608 - 5512629 + g 70 -9.5 -3.1319 | gap 1, opp_overlap 5512606 TTGAGCCAGATGACG GGT-AGCCGT TGC ACGGCTCACC TTGGCTACCTTTTGA TERM 5467 5512743 - 5512753 + g 82 -5.4 -5.07567 | TTGATCTACACGTTG CCAA TAG TTGG TTTTTTCCACTGTCA TERM 5468 5513673 - 5513710 + H 79 -9.3 -3.94002 | gap 1, opp_overlap 5513673 5513676, overlap 5513676 TTGTGAGGCGAATAA CAAGCTTATTTGCCTCGT AAA ATGAGGCGAAT-AGCCTG TTTAATTGACTCATC TERM 5469 5513676 - 5513707 + H 70 -9.6 -2.72881 | gap 1, opp_overlap 5513673 5513676, overlap 5513673 TGAGGCGAATAACAA GCTTATTTGCCTCGT AAA ATGAGGCGAAT-AGC CTGTTTAATTGACTC TERM 5470 5513850 - 5513836 - H 70 -8.6 -3.4015 | ACAACAAGGGTACAA TATGGC AAA GCCATA AATAACACTCCAATC Ssed_4507 5513867 - 5514634 + | hypothetical protein TERM 5471 5515248 - 5515236 - g 74 -9.1 -3.63922 | overlap 5515222 5515234 ACTGTTTTCAAAATA CAGCC CAA GGCTG TCTACCAAGTAAAGC Ssed_4508 5514650 - 5517292 + | putative ATP-dependent helicase